Your job contains 1 sequence.
>psy6712
MNVQCHACIGGTNLSEDLRKLDYGQHVVSGTPGRVFDMIRRRVLRTRNIKMLVLDEADEM
LNKGFKEQIYDVYRYLPPATQVDWLTEKMREANFTVSSMHGDMPQKERDGIMKEFRSGTS
RVLITTDVWARGIDVQQVSLVINYDLPNNRELYIHRIGRSGRFGRKGVAISFVKSDDIRI
LRDIEQYYSTQIDEMPMNGKRSLHSYPARY
The BLAST search returned 6 gene products which did not match your query constraints. Please see the full BLAST report below for the details.
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= psy6712
(210 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
FB|FBgn0037573 - symbol:eIF4AIII "eIF4AIII" species:7227 ... 583 6.8e-98 2
ZFIN|ZDB-GENE-040426-915 - symbol:eif4a3 "eukaryotic tran... 571 3.3e-96 2
UNIPROTKB|Q5ZM36 - symbol:EIF4A3 "Eukaryotic initiation f... 570 4.2e-96 2
UNIPROTKB|Q2NL22 - symbol:EIF4A3 "Eukaryotic initiation f... 570 4.2e-96 2
UNIPROTKB|E2RDZ4 - symbol:EIF4A3 "Uncharacterized protein... 570 4.2e-96 2
UNIPROTKB|P38919 - symbol:EIF4A3 "Eukaryotic initiation f... 570 4.2e-96 2
UNIPROTKB|A6M931 - symbol:EIF4A3 "Eukaryotic initiation f... 570 4.2e-96 2
UNIPROTKB|F1RZ83 - symbol:EIF4A3 "Eukaryotic initiation f... 570 4.2e-96 2
RGD|1591139 - symbol:Eif4a3 "eukaryotic translation initi... 570 4.2e-96 2
WB|WBGene00018007 - symbol:F33D11.10 species:6239 "Caenor... 555 1.8e-93 2
WB|WBGene00022029 - symbol:Y65B4A.6 species:6239 "Caenorh... 555 1.8e-93 2
ASPGD|ASPL0000014018 - symbol:fal1 species:162425 "Emeric... 544 3.4e-92 2
POMBASE|SPAC1F5.10 - symbol:SPAC1F5.10 "ATP-dependent RNA... 532 1.9e-89 2
TAIR|locus:2091191 - symbol:EIF4A-III "eukaryotic initiat... 560 1.0e-86 2
DICTYBASE|DDB_G0269192 - symbol:tifA "eukaryotic translat... 490 4.1e-77 2
UNIPROTKB|F1NTS2 - symbol:EIF4A3 "Eukaryotic initiation f... 570 5.2e-77 2
UNIPROTKB|E1BSE5 - symbol:EIF4A3 "Eukaryotic initiation f... 570 1.4e-76 2
ASPGD|ASPL0000037981 - symbol:AN2932 species:162425 "Emer... 476 1.6e-73 2
UNIPROTKB|A4QVP2 - symbol:TIF1 "ATP-dependent RNA helicas... 475 1.6e-73 2
POMBASE|SPAC1006.07 - symbol:SPAC1006.07 "translation ini... 467 1.1e-72 2
CGD|CAL0001638 - symbol:FAL1 species:5476 "Candida albica... 442 1.4e-72 2
GENEDB_PFALCIPARUM|PFD1070w - symbol:PFD1070w "eukaryotic... 480 6.0e-72 2
UNIPROTKB|Q8IFN9 - symbol:PFD1070w "Eukaryotic initiation... 480 6.0e-72 2
TAIR|locus:2008296 - symbol:AT1G51380 species:3702 "Arabi... 449 1.1e-70 2
UNIPROTKB|Q3SZ65 - symbol:EIF4A2 "Eukaryotic initiation f... 477 3.7e-70 2
UNIPROTKB|E2R3J1 - symbol:EIF4A2 "Uncharacterized protein... 477 3.7e-70 2
UNIPROTKB|Q14240 - symbol:EIF4A2 "Eukaryotic initiation f... 477 3.7e-70 2
UNIPROTKB|Q9NZE6 - symbol:EIF4A2 "BM-010" species:9606 "H... 477 3.7e-70 2
UNIPROTKB|A6M930 - symbol:EIF4A2 "Eukaryotic translation ... 477 3.7e-70 2
MGI|MGI:106906 - symbol:Eif4a2 "eukaryotic translation in... 477 3.7e-70 2
RGD|1309225 - symbol:Eif4a2 "eukaryotic translation initi... 477 3.7e-70 2
UNIPROTKB|F1LP27 - symbol:Eif4a2 "Eukaryotic initiation f... 477 3.7e-70 2
UNIPROTKB|F8WFX2 - symbol:Eif4a2 "Eukaryotic initiation f... 477 3.7e-70 2
UNIPROTKB|Q8JFP1 - symbol:EIF4A2 "Eukaryotic initiation f... 477 6.0e-70 2
ZFIN|ZDB-GENE-040426-2802 - symbol:eif4a2 "eukaryotic tra... 476 6.0e-70 2
ZFIN|ZDB-GENE-031030-2 - symbol:eif4a1a "eukaryotic trans... 470 6.0e-70 2
UNIPROTKB|Q3SZ54 - symbol:EIF4A1 "Eukaryotic initiation f... 466 7.7e-70 2
UNIPROTKB|F1P895 - symbol:EIF4A1 "Uncharacterized protein... 466 7.7e-70 2
UNIPROTKB|J9NU36 - symbol:EIF4A1 "Uncharacterized protein... 466 7.7e-70 2
UNIPROTKB|J9NY67 - symbol:EIF4A1 "Uncharacterized protein... 466 7.7e-70 2
UNIPROTKB|P60842 - symbol:EIF4A1 "Eukaryotic initiation f... 466 7.7e-70 2
UNIPROTKB|A6M928 - symbol:EIF4A1 "Uncharacterized protein... 466 7.7e-70 2
UNIPROTKB|I3LLD5 - symbol:I3LLD5 "Uncharacterized protein... 466 7.7e-70 2
MGI|MGI:95303 - symbol:Eif4a1 "eukaryotic translation ini... 466 7.7e-70 2
UNIPROTKB|Q6P3V8 - symbol:Eif4a1 "Protein Eif4a1" species... 466 7.7e-70 2
ZFIN|ZDB-GENE-040120-6 - symbol:eif4a1b "eukaryotic trans... 464 1.4e-68 2
WB|WBGene00002083 - symbol:inf-1 species:6239 "Caenorhabd... 453 4.7e-68 2
TAIR|locus:2020078 - symbol:EIF4A-2 "eif4a-2" species:370... 416 6.1e-66 2
TAIR|locus:2030285 - symbol:AT1G72730 species:3702 "Arabi... 415 1.4e-64 2
SGD|S000001767 - symbol:TIF1 "Translation initiation fact... 419 2.3e-64 2
SGD|S000003674 - symbol:TIF2 "Translation initiation fact... 419 2.3e-64 2
GENEDB_PFALCIPARUM|PF14_0655 - symbol:PF14_0655 "RNA heli... 412 4.2e-63 2
UNIPROTKB|Q8IKF0 - symbol:H45 "Helicase 45" species:36329... 412 4.2e-63 2
TAIR|locus:2088237 - symbol:EIF4A1 "eukaryotic translatio... 374 1.8e-62 2
DICTYBASE|DDB_G0269146 - symbol:ifdA "eukaryotic translat... 388 1.1e-60 2
UNIPROTKB|E7EQG2 - symbol:EIF4A2 "Eukaryotic initiation f... 316 3.3e-53 2
FB|FBgn0001942 - symbol:eIF-4a "Eukaryotic initiation fac... 453 7.3e-43 1
CGD|CAL0004095 - symbol:TIF species:5476 "Candida albican... 438 2.8e-41 1
UNIPROTKB|P87206 - symbol:TIF1 "ATP-dependent RNA helicas... 438 2.8e-41 1
UNIPROTKB|J3KT12 - symbol:EIF4A1 "Eukaryotic initiation f... 260 3.2e-41 2
UNIPROTKB|J3KSZ0 - symbol:EIF4A1 "Eukaryotic initiation f... 260 4.1e-41 2
SGD|S000002428 - symbol:FAL1 "Nucleolar protein required ... 420 2.3e-39 1
WB|WBGene00018997 - symbol:F57B9.3 species:6239 "Caenorha... 276 1.7e-38 2
ZFIN|ZDB-GENE-030131-6611 - symbol:wu:fk48d07 "wu:fk48d07... 262 1.2e-37 2
ZFIN|ZDB-GENE-070912-83 - symbol:ddx6 "DEAD (Asp-Glu-Ala-... 264 2.4e-37 2
TIGR_CMR|SO_4034 - symbol:SO_4034 "ATP-dependent RNA heli... 266 3.0e-37 2
TAIR|locus:2087852 - symbol:PMH2 "putative mitochondrial ... 241 9.7e-37 2
CGD|CAL0006152 - symbol:DHH1 species:5476 "Candida albica... 262 1.9e-36 2
UNIPROTKB|Q5AAW3 - symbol:DHH1 "ATP-dependent RNA helicas... 262 1.9e-36 2
TAIR|locus:2087832 - symbol:PMH1 "putative mitochondrial ... 238 1.1e-35 2
TAIR|locus:2098886 - symbol:AT3G61240 species:3702 "Arabi... 257 1.6e-35 2
POMBASE|SPAC17G6.14c - symbol:uap56 "ATP-dependent RNA he... 272 2.1e-35 2
UNIPROTKB|Q65N62 - symbol:cshA "DEAD-box ATP-dependent RN... 246 4.4e-35 2
UNIPROTKB|A4RBS3 - symbol:SUB2 "ATP-dependent RNA helicas... 274 5.4e-35 2
SGD|S000005572 - symbol:DBP5 "Cytoplasmic ATP-dependent R... 270 6.7e-35 2
UNIPROTKB|Q3AFI3 - symbol:CHY_0229 "ATP-dependent RNA hel... 256 1.4e-34 2
TIGR_CMR|CHY_0229 - symbol:CHY_0229 "ATP-dependent RNA he... 256 1.4e-34 2
SGD|S000002242 - symbol:SUB2 "Component of the TREX compl... 280 1.9e-34 2
GENEDB_PFALCIPARUM|PFB0445c - symbol:PFB0445c "helicase, ... 269 2.3e-34 2
UNIPROTKB|Q9TY94 - symbol:UAP56 "DEAD box helicase, UAP56... 269 2.3e-34 2
FB|FBgn0263231 - symbol:bel "belle" species:7227 "Drosoph... 239 2.5e-34 2
TIGR_CMR|SO_3783 - symbol:SO_3783 "ATP-dependent RNA heli... 265 3.1e-34 2
TIGR_CMR|GSU_0914 - symbol:GSU_0914 "ATP-dependent RNA he... 259 5.0e-34 2
UNIPROTKB|Q5L3G9 - symbol:cshA "DEAD-box ATP-dependent RN... 237 5.6e-34 2
ASPGD|ASPL0000006660 - symbol:AN5931 species:162425 "Emer... 269 1.0e-33 2
UNIPROTKB|K9J6N8 - symbol:DDX39B "Spliceosome RNA helicas... 254 1.5e-33 2
UNIPROTKB|H0Y7G4 - symbol:DDX39B "Spliceosome RNA helicas... 254 1.5e-33 2
UNIPROTKB|Q81JK1 - symbol:BAS5307 "ATP-dependent RNA heli... 252 1.7e-33 2
TIGR_CMR|BA_5703 - symbol:BA_5703 "ATP-dependent RNA heli... 252 1.7e-33 2
UNIPROTKB|P96614 - symbol:cshA "DEAD-box ATP-dependent RN... 237 2.6e-33 2
TAIR|locus:2147987 - symbol:UAP56a "homolog of human UAP5... 264 3.8e-33 2
UNIPROTKB|B4DP52 - symbol:DDX39B "Spliceosome RNA helicas... 254 6.2e-33 2
ZFIN|ZDB-GENE-030131-4275 - symbol:ddx39aa "DEAD (Asp-Glu... 244 7.3e-33 2
UNIPROTKB|J9NSS1 - symbol:DDX25 "Uncharacterized protein"... 263 7.9e-33 2
UNIPROTKB|F1S758 - symbol:LOC100523329 "Uncharacterized p... 263 7.9e-33 2
UNIPROTKB|Q5WR10 - symbol:DDX39B "Spliceosome RNA helicas... 254 8.9e-33 2
UNIPROTKB|Q13838 - symbol:DDX39B "Spliceosome RNA helicas... 254 8.9e-33 2
UNIPROTKB|Q29024 - symbol:DDX39B "Spliceosome RNA helicas... 254 8.9e-33 2
MGI|MGI:99240 - symbol:Ddx39b "DEAD (Asp-Glu-Ala-Asp) box... 254 8.9e-33 2
RGD|70923 - symbol:Ddx39b "DEAD (Asp-Glu-Ala-Asp) box pol... 254 8.9e-33 2
WARNING: Descriptions of 795 database sequences were not reported due to the
limiting value of parameter V = 100.
>FB|FBgn0037573 [details] [associations]
symbol:eIF4AIII "eIF4AIII" species:7227 "Drosophila
melanogaster" [GO:0016281 "eukaryotic translation initiation factor
4F complex" evidence=ISS] [GO:0003743 "translation initiation
factor activity" evidence=ISS] [GO:0006413 "translational
initiation" evidence=ISS] [GO:0004004 "ATP-dependent RNA helicase
activity" evidence=ISS] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0045495 "pole plasm" evidence=IDA] [GO:0045451 "pole plasm
oskar mRNA localization" evidence=IGI] [GO:0005515 "protein
binding" evidence=IPI] [GO:0005634 "nucleus" evidence=IDA]
[GO:0071011 "precatalytic spliceosome" evidence=IDA] [GO:0071013
"catalytic step 2 spliceosome" evidence=IDA] [GO:0000398 "mRNA
splicing, via spliceosome" evidence=IC] [GO:0006974 "response to
DNA damage stimulus" evidence=IMP] [GO:0008380 "RNA splicing"
evidence=IMP] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0016281
GO:GO:0006974 GO:GO:0003743 GO:GO:0071011 GO:GO:0000398
GO:GO:0071013 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0004004 GO:GO:0045451 GO:GO:0045495 eggNOG:COG0513
InterPro:IPR014014 PROSITE:PS51195 HSSP:P10081 ChiTaRS:EIF4A3
EMBL:AY089635 ProteinModelPortal:Q8SXH3 SMR:Q8SXH3 IntAct:Q8SXH3
STRING:Q8SXH3 PaxDb:Q8SXH3 PRIDE:Q8SXH3 FlyBase:FBgn0037573
InParanoid:Q8SXH3 OrthoDB:EOG4XWDD6 Bgee:Q8SXH3 Uniprot:Q8SXH3
Length = 399
Score = 583 (210.3 bits), Expect = 6.8e-98, Sum P(2) = 6.8e-98
Identities = 112/118 (94%), Positives = 116/118 (98%)
Query: 81 QVDWLTEKMREANFTVSSMHGDMPQKERDGIMKEFRSGTSRVLITTDVWARGIDVQQVSL 140
+VDWLTEKMREANFTVSSMHGDMPQKERD IMKEFR+G SRVLITTDVWARGIDVQQVSL
Sbjct: 277 KVDWLTEKMREANFTVSSMHGDMPQKERDEIMKEFRAGQSRVLITTDVWARGIDVQQVSL 336
Query: 141 VINYDLPNNRELYIHRIGRSGRFGRKGVAISFVKSDDIRILRDIEQYYSTQIDEMPMN 198
VINYDLPNNRELYIHRIGRSGRFGRKGVAI+FVKSDDIRILRDIEQYYSTQIDEMP+N
Sbjct: 337 VINYDLPNNRELYIHRIGRSGRFGRKGVAINFVKSDDIRILRDIEQYYSTQIDEMPVN 394
Score = 409 (149.0 bits), Expect = 6.8e-98, Sum P(2) = 6.8e-98
Identities = 76/82 (92%), Positives = 79/82 (96%)
Query: 1 MNVQCHACIGGTNLSEDLRKLDYGQHVVSGTPGRVFDMIRRRVLRTRNIKMLVLDEADEM 60
MNVQCH CIGGTNL ED+RKLDYGQH+VSGTPGRVFDMI+RRVLRTR IKMLVLDEADEM
Sbjct: 121 MNVQCHVCIGGTNLGEDIRKLDYGQHIVSGTPGRVFDMIKRRVLRTRAIKMLVLDEADEM 180
Query: 61 LNKGFKEQIYDVYRYLPPATQV 82
LNKGFKEQIYDVYRYLPPATQV
Sbjct: 181 LNKGFKEQIYDVYRYLPPATQV 202
>ZFIN|ZDB-GENE-040426-915 [details] [associations]
symbol:eif4a3 "eukaryotic translation initiation
factor 4A, isoform 3" species:7955 "Danio rerio" [GO:0003676
"nucleic acid binding" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0000184 "nuclear-transcribed mRNA catabolic process,
nonsense-mediated decay" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0006810 "transport" evidence=IEA] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0003723 "RNA binding"
evidence=IEA] [GO:0006397 "mRNA processing" evidence=IEA]
[GO:0008380 "RNA splicing" evidence=IEA] [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0051028 "mRNA transport" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0006417 "regulation of
translation" evidence=IEA] [GO:0016607 "nuclear speck"
evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 ZFIN:ZDB-GENE-040426-915
GO:GO:0005524 GO:GO:0005737 GO:GO:0006417 GO:GO:0000184
GO:GO:0008380 GO:GO:0016607 GO:GO:0006397 GO:GO:0003723
GO:GO:0051028 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 eggNOG:COG0513 HOGENOM:HOG000268797
InterPro:IPR014014 PROSITE:PS51195 HSSP:P10081 KO:K13025 CTD:9775
OrthoDB:EOG4229JV EMBL:BC045939 IPI:IPI00481285 RefSeq:NP_957372.1
UniGene:Dr.78203 ProteinModelPortal:Q7ZVA6 SMR:Q7ZVA6 STRING:Q7ZVA6
PRIDE:Q7ZVA6 GeneID:394053 KEGG:dre:394053 InParanoid:Q7ZVA6
NextBio:20815014 ArrayExpress:Q7ZVA6 Uniprot:Q7ZVA6
Length = 406
Score = 571 (206.1 bits), Expect = 3.3e-96, Sum P(2) = 3.3e-96
Identities = 107/118 (90%), Positives = 115/118 (97%)
Query: 81 QVDWLTEKMREANFTVSSMHGDMPQKERDGIMKEFRSGTSRVLITTDVWARGIDVQQVSL 140
+VDWLTEKMREANFTVSSMHGDMPQKER+ IMKEFRSG SRVLI+TDVWARG+DV QVSL
Sbjct: 284 KVDWLTEKMREANFTVSSMHGDMPQKERESIMKEFRSGASRVLISTDVWARGLDVSQVSL 343
Query: 141 VINYDLPNNRELYIHRIGRSGRFGRKGVAISFVKSDDIRILRDIEQYYSTQIDEMPMN 198
+INYDLPNNRELYIHRIGRSGR+GRKGVAI+FVK+DDIRILRDIEQYYSTQIDEMPMN
Sbjct: 344 IINYDLPNNRELYIHRIGRSGRYGRKGVAINFVKNDDIRILRDIEQYYSTQIDEMPMN 401
Score = 405 (147.6 bits), Expect = 3.3e-96, Sum P(2) = 3.3e-96
Identities = 76/82 (92%), Positives = 79/82 (96%)
Query: 1 MNVQCHACIGGTNLSEDLRKLDYGQHVVSGTPGRVFDMIRRRVLRTRNIKMLVLDEADEM 60
MNVQCHACIGGTN+ ED+RKLDYGQHVV+GTPGRVFDMIRRR LRTR IKMLVLDEADEM
Sbjct: 128 MNVQCHACIGGTNVGEDIRKLDYGQHVVAGTPGRVFDMIRRRSLRTRAIKMLVLDEADEM 187
Query: 61 LNKGFKEQIYDVYRYLPPATQV 82
LNKGFKEQIYDVYRYLPPATQV
Sbjct: 188 LNKGFKEQIYDVYRYLPPATQV 209
>UNIPROTKB|Q5ZM36 [details] [associations]
symbol:EIF4A3 "Eukaryotic initiation factor 4A-III"
species:9031 "Gallus gallus" [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0000184 "nuclear-transcribed mRNA
catabolic process, nonsense-mediated decay" evidence=IEA]
[GO:0003723 "RNA binding" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0006397 "mRNA processing" evidence=IEA]
[GO:0006417 "regulation of translation" evidence=IEA] [GO:0008380
"RNA splicing" evidence=IEA] [GO:0051028 "mRNA transport"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0016607
"nuclear speck" evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0005737
GO:GO:0006417 GO:GO:0000184 GO:GO:0008380 GO:GO:0016607
GO:GO:0006397 GO:GO:0003723 GO:GO:0051028 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 HOGENOM:HOG000268797
InterPro:IPR014014 PROSITE:PS51195 HSSP:P10081 KO:K13025 CTD:9775
OrthoDB:EOG4229JV EMBL:AJ719548 IPI:IPI00588271
RefSeq:NP_001025820.1 UniGene:Gga.7844 ProteinModelPortal:Q5ZM36
SMR:Q5ZM36 PRIDE:Q5ZM36 GeneID:416704 KEGG:gga:416704
InParanoid:Q5ZM36 NextBio:20820126 Uniprot:Q5ZM36
Length = 412
Score = 570 (205.7 bits), Expect = 4.2e-96, Sum P(2) = 4.2e-96
Identities = 107/118 (90%), Positives = 115/118 (97%)
Query: 81 QVDWLTEKMREANFTVSSMHGDMPQKERDGIMKEFRSGTSRVLITTDVWARGIDVQQVSL 140
+VDWLTEKMREANFTVSSMHGDMPQKER+ IMKEFRSG SRVLI+TDVWARG+DV QVSL
Sbjct: 290 KVDWLTEKMREANFTVSSMHGDMPQKERESIMKEFRSGASRVLISTDVWARGLDVPQVSL 349
Query: 141 VINYDLPNNRELYIHRIGRSGRFGRKGVAISFVKSDDIRILRDIEQYYSTQIDEMPMN 198
+INYDLPNNRELYIHRIGRSGR+GRKGVAI+FVK+DDIRILRDIEQYYSTQIDEMPMN
Sbjct: 350 IINYDLPNNRELYIHRIGRSGRYGRKGVAINFVKNDDIRILRDIEQYYSTQIDEMPMN 407
Score = 405 (147.6 bits), Expect = 4.2e-96, Sum P(2) = 4.2e-96
Identities = 76/82 (92%), Positives = 79/82 (96%)
Query: 1 MNVQCHACIGGTNLSEDLRKLDYGQHVVSGTPGRVFDMIRRRVLRTRNIKMLVLDEADEM 60
MNVQCHACIGGTN+ ED+RKLDYGQHVV+GTPGRVFDMIRRR LRTR IKMLVLDEADEM
Sbjct: 134 MNVQCHACIGGTNVGEDIRKLDYGQHVVAGTPGRVFDMIRRRSLRTRAIKMLVLDEADEM 193
Query: 61 LNKGFKEQIYDVYRYLPPATQV 82
LNKGFKEQIYDVYRYLPPATQV
Sbjct: 194 LNKGFKEQIYDVYRYLPPATQV 215
>UNIPROTKB|Q2NL22 [details] [associations]
symbol:EIF4A3 "Eukaryotic initiation factor 4A-III"
species:9913 "Bos taurus" [GO:0016607 "nuclear speck" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0071013 "catalytic step 2
spliceosome" evidence=IEA] [GO:0048026 "positive regulation of mRNA
splicing, via spliceosome" evidence=IEA] [GO:0045944 "positive
regulation of transcription from RNA polymerase II promoter"
evidence=IEA] [GO:0045727 "positive regulation of translation"
evidence=IEA] [GO:0035145 "exon-exon junction complex"
evidence=IEA] [GO:0017148 "negative regulation of translation"
evidence=IEA] [GO:0008143 "poly(A) RNA binding" evidence=IEA]
[GO:0004004 "ATP-dependent RNA helicase activity" evidence=IEA]
[GO:0000184 "nuclear-transcribed mRNA catabolic process,
nonsense-mediated decay" evidence=IEA] [GO:0051028 "mRNA transport"
evidence=IEA] [GO:0008380 "RNA splicing" evidence=IEA] [GO:0006397
"mRNA processing" evidence=IEA] [GO:0006364 "rRNA processing"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0005737 GO:GO:0000184
GO:GO:0008380 GO:GO:0017148 GO:GO:0016607 GO:GO:0006397
GO:GO:0045727 GO:GO:0051028 GO:GO:0071013 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0006364 GO:GO:0004004
GO:GO:0035145 eggNOG:COG0513 HOGENOM:HOG000268797
InterPro:IPR014014 PROSITE:PS51195 GO:GO:0008143 HOVERGEN:HBG107989
GeneTree:ENSGT00530000062880 KO:K13025 EMBL:BC111184
IPI:IPI00708766 RefSeq:NP_001039653.1 UniGene:Bt.3377
ProteinModelPortal:Q2NL22 SMR:Q2NL22 PRIDE:Q2NL22
Ensembl:ENSBTAT00000021327 GeneID:515145 KEGG:bta:515145 CTD:9775
InParanoid:Q2NL22 OMA:LALGDFM OrthoDB:EOG4229JV NextBio:20871682
Uniprot:Q2NL22
Length = 411
Score = 570 (205.7 bits), Expect = 4.2e-96, Sum P(2) = 4.2e-96
Identities = 107/118 (90%), Positives = 115/118 (97%)
Query: 81 QVDWLTEKMREANFTVSSMHGDMPQKERDGIMKEFRSGTSRVLITTDVWARGIDVQQVSL 140
+VDWLTEKMREANFTVSSMHGDMPQKER+ IMKEFRSG SRVLI+TDVWARG+DV QVSL
Sbjct: 289 KVDWLTEKMREANFTVSSMHGDMPQKERESIMKEFRSGASRVLISTDVWARGLDVPQVSL 348
Query: 141 VINYDLPNNRELYIHRIGRSGRFGRKGVAISFVKSDDIRILRDIEQYYSTQIDEMPMN 198
+INYDLPNNRELYIHRIGRSGR+GRKGVAI+FVK+DDIRILRDIEQYYSTQIDEMPMN
Sbjct: 349 IINYDLPNNRELYIHRIGRSGRYGRKGVAINFVKNDDIRILRDIEQYYSTQIDEMPMN 406
Score = 405 (147.6 bits), Expect = 4.2e-96, Sum P(2) = 4.2e-96
Identities = 76/82 (92%), Positives = 79/82 (96%)
Query: 1 MNVQCHACIGGTNLSEDLRKLDYGQHVVSGTPGRVFDMIRRRVLRTRNIKMLVLDEADEM 60
MNVQCHACIGGTN+ ED+RKLDYGQHVV+GTPGRVFDMIRRR LRTR IKMLVLDEADEM
Sbjct: 133 MNVQCHACIGGTNVGEDIRKLDYGQHVVAGTPGRVFDMIRRRSLRTRAIKMLVLDEADEM 192
Query: 61 LNKGFKEQIYDVYRYLPPATQV 82
LNKGFKEQIYDVYRYLPPATQV
Sbjct: 193 LNKGFKEQIYDVYRYLPPATQV 214
>UNIPROTKB|E2RDZ4 [details] [associations]
symbol:EIF4A3 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0071013 "catalytic step 2 spliceosome"
evidence=IEA] [GO:0048026 "positive regulation of mRNA splicing,
via spliceosome" evidence=IEA] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=IEA]
[GO:0045727 "positive regulation of translation" evidence=IEA]
[GO:0035145 "exon-exon junction complex" evidence=IEA] [GO:0017148
"negative regulation of translation" evidence=IEA] [GO:0008143
"poly(A) RNA binding" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0004004 "ATP-dependent RNA helicase activity"
evidence=IEA] [GO:0000184 "nuclear-transcribed mRNA catabolic
process, nonsense-mediated decay" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0005737
GO:GO:0000184 GO:GO:0017148 GO:GO:0045727 GO:GO:0071013
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0004004
GO:GO:0035145 InterPro:IPR014014 PROSITE:PS51195 GO:GO:0008143
GeneTree:ENSGT00530000062880 KO:K13025 OMA:EDWKFDT CTD:9775
EMBL:AAEX03006203 RefSeq:XP_533130.2 Ensembl:ENSCAFT00000009055
GeneID:475922 KEGG:cfa:475922 NextBio:20851666 Uniprot:E2RDZ4
Length = 411
Score = 570 (205.7 bits), Expect = 4.2e-96, Sum P(2) = 4.2e-96
Identities = 107/118 (90%), Positives = 115/118 (97%)
Query: 81 QVDWLTEKMREANFTVSSMHGDMPQKERDGIMKEFRSGTSRVLITTDVWARGIDVQQVSL 140
+VDWLTEKMREANFTVSSMHGDMPQKER+ IMKEFRSG SRVLI+TDVWARG+DV QVSL
Sbjct: 289 KVDWLTEKMREANFTVSSMHGDMPQKERESIMKEFRSGASRVLISTDVWARGLDVPQVSL 348
Query: 141 VINYDLPNNRELYIHRIGRSGRFGRKGVAISFVKSDDIRILRDIEQYYSTQIDEMPMN 198
+INYDLPNNRELYIHRIGRSGR+GRKGVAI+FVK+DDIRILRDIEQYYSTQIDEMPMN
Sbjct: 349 IINYDLPNNRELYIHRIGRSGRYGRKGVAINFVKNDDIRILRDIEQYYSTQIDEMPMN 406
Score = 405 (147.6 bits), Expect = 4.2e-96, Sum P(2) = 4.2e-96
Identities = 76/82 (92%), Positives = 79/82 (96%)
Query: 1 MNVQCHACIGGTNLSEDLRKLDYGQHVVSGTPGRVFDMIRRRVLRTRNIKMLVLDEADEM 60
MNVQCHACIGGTN+ ED+RKLDYGQHVV+GTPGRVFDMIRRR LRTR IKMLVLDEADEM
Sbjct: 133 MNVQCHACIGGTNVGEDIRKLDYGQHVVAGTPGRVFDMIRRRSLRTRAIKMLVLDEADEM 192
Query: 61 LNKGFKEQIYDVYRYLPPATQV 82
LNKGFKEQIYDVYRYLPPATQV
Sbjct: 193 LNKGFKEQIYDVYRYLPPATQV 214
>UNIPROTKB|P38919 [details] [associations]
symbol:EIF4A3 "Eukaryotic initiation factor 4A-III"
species:9606 "Homo sapiens" [GO:0006364 "rRNA processing"
evidence=IEA] [GO:0051028 "mRNA transport" evidence=IEA]
[GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0048026 "positive
regulation of mRNA splicing, via spliceosome" evidence=IEA]
[GO:0016607 "nuclear speck" evidence=IEA] [GO:0071013 "catalytic
step 2 spliceosome" evidence=IDA] [GO:0045727 "positive regulation
of translation" evidence=IMP] [GO:0000398 "mRNA splicing, via
spliceosome" evidence=IC] [GO:0035145 "exon-exon junction complex"
evidence=IDA] [GO:0000184 "nuclear-transcribed mRNA catabolic
process, nonsense-mediated decay" evidence=IMP;TAS] [GO:0005515
"protein binding" evidence=IPI] [GO:0004004 "ATP-dependent RNA
helicase activity" evidence=IDA] [GO:0005524 "ATP binding"
evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0008143
"poly(A) RNA binding" evidence=IDA] [GO:0017148 "negative
regulation of translation" evidence=IDA] [GO:0000288
"nuclear-transcribed mRNA catabolic process,
deadenylation-dependent decay" evidence=TAS] [GO:0000289
"nuclear-transcribed mRNA poly(A) tail shortening" evidence=TAS]
[GO:0005829 "cytosol" evidence=TAS] [GO:0010467 "gene expression"
evidence=TAS] [GO:0016070 "RNA metabolic process" evidence=TAS]
[GO:0016071 "mRNA metabolic process" evidence=TAS] [GO:0019221
"cytokine-mediated signaling pathway" evidence=TAS]
Reactome:REACT_71 Reactome:REACT_21257 InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005829
GO:GO:0005524 Reactome:REACT_6900 GO:GO:0000184 GO:GO:0017148
GO:GO:0016607 GO:GO:0019221 TCDB:3.A.18.1.1 EMBL:CH471099
GO:GO:0045727 GO:GO:0051028 GO:GO:0000398 GO:GO:0071013
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0006364
GO:GO:0004004 GO:GO:0000289 EMBL:AC087741 GO:GO:0035145 PDB:2HYI
PDB:2J0Q PDB:2J0S PDB:2J0U PDB:2XB2 PDB:3EX7 PDBsum:2HYI
PDBsum:2J0Q PDBsum:2J0S PDBsum:2J0U PDBsum:2XB2 PDBsum:3EX7
eggNOG:COG0513 HOGENOM:HOG000268797 InterPro:IPR014014
PROSITE:PS51195 GO:GO:0008143 HOVERGEN:HBG107989 KO:K13025
OMA:EDWKFDT CTD:9775 OrthoDB:EOG4229JV EMBL:X79538 EMBL:D21853
EMBL:AK290608 EMBL:CR456750 EMBL:BC003662 EMBL:BC004386
EMBL:BC011151 IPI:IPI00009328 PIR:S45142 RefSeq:NP_055555.1
UniGene:Hs.389649 PDB:2HXY PDBsum:2HXY ProteinModelPortal:P38919
SMR:P38919 DIP:DIP-33218N IntAct:P38919 MINT:MINT-1460615
STRING:P38919 PhosphoSite:P38919 DMDM:20532400
REPRODUCTION-2DPAGE:IPI00009328 PaxDb:P38919 PeptideAtlas:P38919
PRIDE:P38919 DNASU:9775 Ensembl:ENST00000269349 GeneID:9775
KEGG:hsa:9775 UCSC:uc002jxs.3 GeneCards:GC17M078109 HGNC:HGNC:18683
HPA:HPA021878 MIM:608546 neXtProt:NX_P38919 PharmGKB:PA162384945
InParanoid:P38919 PhylomeDB:P38919 ChiTaRS:EIF4A3
EvolutionaryTrace:P38919 GenomeRNAi:9775 NextBio:36802 Bgee:P38919
CleanEx:HS_EIF4A3 Genevestigator:P38919 GermOnline:ENSG00000141543
Uniprot:P38919
Length = 411
Score = 570 (205.7 bits), Expect = 4.2e-96, Sum P(2) = 4.2e-96
Identities = 107/118 (90%), Positives = 115/118 (97%)
Query: 81 QVDWLTEKMREANFTVSSMHGDMPQKERDGIMKEFRSGTSRVLITTDVWARGIDVQQVSL 140
+VDWLTEKMREANFTVSSMHGDMPQKER+ IMKEFRSG SRVLI+TDVWARG+DV QVSL
Sbjct: 289 KVDWLTEKMREANFTVSSMHGDMPQKERESIMKEFRSGASRVLISTDVWARGLDVPQVSL 348
Query: 141 VINYDLPNNRELYIHRIGRSGRFGRKGVAISFVKSDDIRILRDIEQYYSTQIDEMPMN 198
+INYDLPNNRELYIHRIGRSGR+GRKGVAI+FVK+DDIRILRDIEQYYSTQIDEMPMN
Sbjct: 349 IINYDLPNNRELYIHRIGRSGRYGRKGVAINFVKNDDIRILRDIEQYYSTQIDEMPMN 406
Score = 405 (147.6 bits), Expect = 4.2e-96, Sum P(2) = 4.2e-96
Identities = 76/82 (92%), Positives = 79/82 (96%)
Query: 1 MNVQCHACIGGTNLSEDLRKLDYGQHVVSGTPGRVFDMIRRRVLRTRNIKMLVLDEADEM 60
MNVQCHACIGGTN+ ED+RKLDYGQHVV+GTPGRVFDMIRRR LRTR IKMLVLDEADEM
Sbjct: 133 MNVQCHACIGGTNVGEDIRKLDYGQHVVAGTPGRVFDMIRRRSLRTRAIKMLVLDEADEM 192
Query: 61 LNKGFKEQIYDVYRYLPPATQV 82
LNKGFKEQIYDVYRYLPPATQV
Sbjct: 193 LNKGFKEQIYDVYRYLPPATQV 214
>UNIPROTKB|A6M931 [details] [associations]
symbol:EIF4A3 "Eukaryotic initiation factor 4A-III"
species:9823 "Sus scrofa" [GO:0016607 "nuclear speck" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0051028 "mRNA transport"
evidence=IEA] [GO:0008380 "RNA splicing" evidence=IEA] [GO:0006417
"regulation of translation" evidence=IEA] [GO:0006397 "mRNA
processing" evidence=IEA] [GO:0006364 "rRNA processing"
evidence=IEA] [GO:0005681 "spliceosomal complex" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0003723 "RNA binding"
evidence=IEA] [GO:0000184 "nuclear-transcribed mRNA catabolic
process, nonsense-mediated decay" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0005737 GO:GO:0006417 GO:GO:0000184 GO:GO:0008380
GO:GO:0016607 GO:GO:0006397 GO:GO:0005681 GO:GO:0003723
GO:GO:0051028 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0006364 GO:GO:0008026 eggNOG:COG0513 HOGENOM:HOG000268797
InterPro:IPR014014 PROSITE:PS51195 KO:K13025 CTD:9775
OrthoDB:EOG4229JV EMBL:DQ351286 RefSeq:NP_001093663.1
UniGene:Ssc.869 ProteinModelPortal:A6M931 SMR:A6M931 PRIDE:A6M931
GeneID:100101926 KEGG:ssc:100101926 Uniprot:A6M931
Length = 411
Score = 570 (205.7 bits), Expect = 4.2e-96, Sum P(2) = 4.2e-96
Identities = 107/118 (90%), Positives = 115/118 (97%)
Query: 81 QVDWLTEKMREANFTVSSMHGDMPQKERDGIMKEFRSGTSRVLITTDVWARGIDVQQVSL 140
+VDWLTEKMREANFTVSSMHGDMPQKER+ IMKEFRSG SRVLI+TDVWARG+DV QVSL
Sbjct: 289 KVDWLTEKMREANFTVSSMHGDMPQKERESIMKEFRSGASRVLISTDVWARGLDVPQVSL 348
Query: 141 VINYDLPNNRELYIHRIGRSGRFGRKGVAISFVKSDDIRILRDIEQYYSTQIDEMPMN 198
+INYDLPNNRELYIHRIGRSGR+GRKGVAI+FVK+DDIRILRDIEQYYSTQIDEMPMN
Sbjct: 349 IINYDLPNNRELYIHRIGRSGRYGRKGVAINFVKNDDIRILRDIEQYYSTQIDEMPMN 406
Score = 405 (147.6 bits), Expect = 4.2e-96, Sum P(2) = 4.2e-96
Identities = 76/82 (92%), Positives = 79/82 (96%)
Query: 1 MNVQCHACIGGTNLSEDLRKLDYGQHVVSGTPGRVFDMIRRRVLRTRNIKMLVLDEADEM 60
MNVQCHACIGGTN+ ED+RKLDYGQHVV+GTPGRVFDMIRRR LRTR IKMLVLDEADEM
Sbjct: 133 MNVQCHACIGGTNVGEDIRKLDYGQHVVAGTPGRVFDMIRRRSLRTRAIKMLVLDEADEM 192
Query: 61 LNKGFKEQIYDVYRYLPPATQV 82
LNKGFKEQIYDVYRYLPPATQV
Sbjct: 193 LNKGFKEQIYDVYRYLPPATQV 214
>UNIPROTKB|F1RZ83 [details] [associations]
symbol:EIF4A3 "Eukaryotic initiation factor 4A-III"
species:9823 "Sus scrofa" [GO:0071013 "catalytic step 2
spliceosome" evidence=IEA] [GO:0045727 "positive regulation of
translation" evidence=IEA] [GO:0035145 "exon-exon junction complex"
evidence=IEA] [GO:0017148 "negative regulation of translation"
evidence=IEA] [GO:0008143 "poly(A) RNA binding" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0004004 "ATP-dependent
RNA helicase activity" evidence=IEA] [GO:0000184
"nuclear-transcribed mRNA catabolic process, nonsense-mediated
decay" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014
PROSITE:PS51195 GeneTree:ENSGT00530000062880 OMA:EDWKFDT
EMBL:CU655945 Ensembl:ENSSSCT00000018679 ArrayExpress:F1RZ83
Uniprot:F1RZ83
Length = 411
Score = 570 (205.7 bits), Expect = 4.2e-96, Sum P(2) = 4.2e-96
Identities = 107/118 (90%), Positives = 115/118 (97%)
Query: 81 QVDWLTEKMREANFTVSSMHGDMPQKERDGIMKEFRSGTSRVLITTDVWARGIDVQQVSL 140
+VDWLTEKMREANFTVSSMHGDMPQKER+ IMKEFRSG SRVLI+TDVWARG+DV QVSL
Sbjct: 289 KVDWLTEKMREANFTVSSMHGDMPQKERESIMKEFRSGASRVLISTDVWARGLDVPQVSL 348
Query: 141 VINYDLPNNRELYIHRIGRSGRFGRKGVAISFVKSDDIRILRDIEQYYSTQIDEMPMN 198
+INYDLPNNRELYIHRIGRSGR+GRKGVAI+FVK+DDIRILRDIEQYYSTQIDEMPMN
Sbjct: 349 IINYDLPNNRELYIHRIGRSGRYGRKGVAINFVKNDDIRILRDIEQYYSTQIDEMPMN 406
Score = 405 (147.6 bits), Expect = 4.2e-96, Sum P(2) = 4.2e-96
Identities = 76/82 (92%), Positives = 79/82 (96%)
Query: 1 MNVQCHACIGGTNLSEDLRKLDYGQHVVSGTPGRVFDMIRRRVLRTRNIKMLVLDEADEM 60
MNVQCHACIGGTN+ ED+RKLDYGQHVV+GTPGRVFDMIRRR LRTR IKMLVLDEADEM
Sbjct: 133 MNVQCHACIGGTNVGEDIRKLDYGQHVVAGTPGRVFDMIRRRSLRTRAIKMLVLDEADEM 192
Query: 61 LNKGFKEQIYDVYRYLPPATQV 82
LNKGFKEQIYDVYRYLPPATQV
Sbjct: 193 LNKGFKEQIYDVYRYLPPATQV 214
>RGD|1591139 [details] [associations]
symbol:Eif4a3 "eukaryotic translation initiation factor 4A,
isoform 3" species:10116 "Rattus norvegicus" [GO:0000184
"nuclear-transcribed mRNA catabolic process, nonsense-mediated
decay" evidence=IEA] [GO:0004004 "ATP-dependent RNA helicase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0006364 "rRNA processing"
evidence=IEA] [GO:0006397 "mRNA processing" evidence=IEA]
[GO:0008143 "poly(A) RNA binding" evidence=IEA] [GO:0008380 "RNA
splicing" evidence=IEA] [GO:0016607 "nuclear speck" evidence=IEA]
[GO:0017148 "negative regulation of translation" evidence=IEA]
[GO:0035145 "exon-exon junction complex" evidence=IEA] [GO:0045727
"positive regulation of translation" evidence=IEA] [GO:0045944
"positive regulation of transcription from RNA polymerase II
promoter" evidence=IEA] [GO:0048026 "positive regulation of mRNA
splicing, via spliceosome" evidence=IEA] [GO:0051028 "mRNA
transport" evidence=IEA] [GO:0071013 "catalytic step 2 spliceosome"
evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 RGD:1591139 GO:GO:0005524
GO:GO:0005737 GO:GO:0006417 GO:GO:0000184 GO:GO:0008380
GO:GO:0016607 GO:GO:0006397 GO:GO:0005681 GO:GO:0003723
EMBL:CH473948 GO:GO:0051028 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0006364 GO:GO:0008026 InterPro:IPR014014
PROSITE:PS51195 HSSP:P60842 KO:K13025 CTD:9775 EMBL:BC105875
IPI:IPI00656385 RefSeq:NP_001093628.1 UniGene:Rn.202617
ProteinModelPortal:Q3B8Q2 SMR:Q3B8Q2 PRIDE:Q3B8Q2 GeneID:688288
KEGG:rno:688288 NextBio:736113 Genevestigator:Q3B8Q2 Uniprot:Q3B8Q2
Length = 411
Score = 570 (205.7 bits), Expect = 4.2e-96, Sum P(2) = 4.2e-96
Identities = 107/118 (90%), Positives = 115/118 (97%)
Query: 81 QVDWLTEKMREANFTVSSMHGDMPQKERDGIMKEFRSGTSRVLITTDVWARGIDVQQVSL 140
+VDWLTEKMREANFTVSSMHGDMPQKER+ IMKEFRSG SRVLI+TDVWARG+DV QVSL
Sbjct: 289 KVDWLTEKMREANFTVSSMHGDMPQKERESIMKEFRSGASRVLISTDVWARGLDVPQVSL 348
Query: 141 VINYDLPNNRELYIHRIGRSGRFGRKGVAISFVKSDDIRILRDIEQYYSTQIDEMPMN 198
+INYDLPNNRELYIHRIGRSGR+GRKGVAI+FVK+DDIRILRDIEQYYSTQIDEMPMN
Sbjct: 349 IINYDLPNNRELYIHRIGRSGRYGRKGVAINFVKNDDIRILRDIEQYYSTQIDEMPMN 406
Score = 405 (147.6 bits), Expect = 4.2e-96, Sum P(2) = 4.2e-96
Identities = 76/82 (92%), Positives = 79/82 (96%)
Query: 1 MNVQCHACIGGTNLSEDLRKLDYGQHVVSGTPGRVFDMIRRRVLRTRNIKMLVLDEADEM 60
MNVQCHACIGGTN+ ED+RKLDYGQHVV+GTPGRVFDMIRRR LRTR IKMLVLDEADEM
Sbjct: 133 MNVQCHACIGGTNVGEDIRKLDYGQHVVAGTPGRVFDMIRRRSLRTRAIKMLVLDEADEM 192
Query: 61 LNKGFKEQIYDVYRYLPPATQV 82
LNKGFKEQIYDVYRYLPPATQV
Sbjct: 193 LNKGFKEQIYDVYRYLPPATQV 214
>WB|WBGene00018007 [details] [associations]
symbol:F33D11.10 species:6239 "Caenorhabditis elegans"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0009792 "embryo development ending in birth or
egg hatching" evidence=IMP] [GO:0009790 "embryo development"
evidence=IMP] [GO:0001703 "gastrulation with mouth forming first"
evidence=IMP] [GO:0000003 "reproduction" evidence=IMP] [GO:0051301
"cell division" evidence=IMP] [GO:0000910 "cytokinesis"
evidence=IMP] [GO:0040007 "growth" evidence=IMP] [GO:0002119
"nematode larval development" evidence=IMP] [GO:0018996 "molting
cycle, collagen and cuticulin-based cuticle" evidence=IMP]
[GO:0040035 "hermaphrodite genitalia development" evidence=IMP]
[GO:0040010 "positive regulation of growth rate" evidence=IMP]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0009792 GO:GO:0040007
GO:GO:0040010 GO:GO:0002119 GO:GO:0018996 GO:GO:0003676
GO:GO:0000910 GO:GO:0040035 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513 HOGENOM:HOG000268797
InterPro:IPR014014 PROSITE:PS51195 HSSP:P10081
GeneTree:ENSGT00530000062880 GO:GO:0001703 KO:K13025 OMA:IFGKQPF
EMBL:FO080753 PIR:T32773 RefSeq:NP_491703.1
ProteinModelPortal:O44781 SMR:O44781 DIP:DIP-27243N IntAct:O44781
MINT:MINT-1047941 STRING:O44781 PaxDb:O44781
EnsemblMetazoa:F33D11.10.1 EnsemblMetazoa:F33D11.10.2 GeneID:172258
KEGG:cel:CELE_F33D11.10 UCSC:F33D11.10.1 CTD:172258
WormBase:F33D11.10 InParanoid:O44781 NextBio:874709 Uniprot:O44781
Length = 399
Score = 555 (200.4 bits), Expect = 1.8e-93, Sum P(2) = 1.8e-93
Identities = 103/118 (87%), Positives = 114/118 (96%)
Query: 81 QVDWLTEKMREANFTVSSMHGDMPQKERDGIMKEFRSGTSRVLITTDVWARGIDVQQVSL 140
+VDWLT+KM+EANFTVSSMHGDM QK+RD +MKEFR+GT+RVLI+TDVWARG+DV QVSL
Sbjct: 277 KVDWLTDKMKEANFTVSSMHGDMEQKDRDEVMKEFRAGTTRVLISTDVWARGLDVPQVSL 336
Query: 141 VINYDLPNNRELYIHRIGRSGRFGRKGVAISFVKSDDIRILRDIEQYYSTQIDEMPMN 198
VINYDLPNNRELYIHRIGRSGRFGRKGVAI+FVK DD+RILRDIEQYYSTQIDEMPMN
Sbjct: 337 VINYDLPNNRELYIHRIGRSGRFGRKGVAINFVKQDDVRILRDIEQYYSTQIDEMPMN 394
Score = 395 (144.1 bits), Expect = 1.8e-93, Sum P(2) = 1.8e-93
Identities = 73/82 (89%), Positives = 77/82 (93%)
Query: 1 MNVQCHACIGGTNLSEDLRKLDYGQHVVSGTPGRVFDMIRRRVLRTRNIKMLVLDEADEM 60
MNVQCHACIGGTNL ED+RKLDYGQHVVSGTPGRVFDMIRRR LRTR IK+LVLDEADEM
Sbjct: 121 MNVQCHACIGGTNLGEDIRKLDYGQHVVSGTPGRVFDMIRRRNLRTRAIKLLVLDEADEM 180
Query: 61 LNKGFKEQIYDVYRYLPPATQV 82
LNKGFKEQ+YD+YRYLPP QV
Sbjct: 181 LNKGFKEQLYDIYRYLPPGAQV 202
>WB|WBGene00022029 [details] [associations]
symbol:Y65B4A.6 species:6239 "Caenorhabditis elegans"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0018991 "oviposition" evidence=IMP] [GO:0040007
"growth" evidence=IMP] [GO:0002119 "nematode larval development"
evidence=IMP] [GO:0018996 "molting cycle, collagen and
cuticulin-based cuticle" evidence=IMP] [GO:0040011 "locomotion"
evidence=IMP] [GO:0000003 "reproduction" evidence=IMP] [GO:0040035
"hermaphrodite genitalia development" evidence=IMP] [GO:0009792
"embryo development ending in birth or egg hatching" evidence=IMP]
[GO:0042127 "regulation of cell proliferation" evidence=IMP]
[GO:0040020 "regulation of meiosis" evidence=IMP] [GO:0007281 "germ
cell development" evidence=IMP] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0009792 GO:GO:0040007 GO:GO:0018991 GO:GO:0002119
GO:GO:0018996 GO:GO:0040011 GO:GO:0003676 GO:GO:0042127
GO:GO:0040035 GO:GO:0007281 GO:GO:0040020 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513
HOGENOM:HOG000268797 InterPro:IPR014014 PROSITE:PS51195 HSSP:P10081
GeneTree:ENSGT00530000062880 KO:K13025 OMA:EDWKFDT EMBL:FO081482
RefSeq:NP_490761.2 ProteinModelPortal:Q9BL61 SMR:Q9BL61
STRING:Q9BL61 PaxDb:Q9BL61 EnsemblMetazoa:Y65B4A.6 GeneID:190485
KEGG:cel:CELE_Y65B4A.6 UCSC:Y65B4A.6 CTD:190485 WormBase:Y65B4A.6
InParanoid:Q9BL61 NextBio:945920 Uniprot:Q9BL61
Length = 399
Score = 555 (200.4 bits), Expect = 1.8e-93, Sum P(2) = 1.8e-93
Identities = 103/118 (87%), Positives = 114/118 (96%)
Query: 81 QVDWLTEKMREANFTVSSMHGDMPQKERDGIMKEFRSGTSRVLITTDVWARGIDVQQVSL 140
+VDWLT+KM+EANFTVSSMHGDM QK+RD +MKEFR+GT+RVLI+TDVWARG+DV QVSL
Sbjct: 277 KVDWLTDKMKEANFTVSSMHGDMEQKDRDEVMKEFRAGTTRVLISTDVWARGLDVPQVSL 336
Query: 141 VINYDLPNNRELYIHRIGRSGRFGRKGVAISFVKSDDIRILRDIEQYYSTQIDEMPMN 198
VINYDLPNNRELYIHRIGRSGRFGRKGVAI+FVK DD+RILRDIEQYYSTQIDEMPMN
Sbjct: 337 VINYDLPNNRELYIHRIGRSGRFGRKGVAINFVKQDDVRILRDIEQYYSTQIDEMPMN 394
Score = 395 (144.1 bits), Expect = 1.8e-93, Sum P(2) = 1.8e-93
Identities = 73/82 (89%), Positives = 77/82 (93%)
Query: 1 MNVQCHACIGGTNLSEDLRKLDYGQHVVSGTPGRVFDMIRRRVLRTRNIKMLVLDEADEM 60
MNVQCHACIGGTNL ED+RKLDYGQHVVSGTPGRVFDMIRRR LRTR IK+LVLDEADEM
Sbjct: 121 MNVQCHACIGGTNLGEDIRKLDYGQHVVSGTPGRVFDMIRRRNLRTRAIKLLVLDEADEM 180
Query: 61 LNKGFKEQIYDVYRYLPPATQV 82
LNKGFKEQ+YD+YRYLPP QV
Sbjct: 181 LNKGFKEQLYDIYRYLPPGAQV 202
>ASPGD|ASPL0000014018 [details] [associations]
symbol:fal1 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0005829 "cytosol"
evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0005730
GO:GO:0003723 EMBL:BN001302 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0006364 GO:GO:0008026 eggNOG:COG0513
HOGENOM:HOG000268797 InterPro:IPR014014 PROSITE:PS51195
EMBL:AACD01000139 KO:K13025 RefSeq:XP_681285.1
ProteinModelPortal:Q5AUL4 SMR:Q5AUL4 PRIDE:Q5AUL4
EnsemblFungi:CADANIAT00004036 GeneID:2869287 KEGG:ani:AN8016.2
OMA:EDWKFDT OrthoDB:EOG4HTD1W Uniprot:Q5AUL4
Length = 399
Score = 544 (196.6 bits), Expect = 3.4e-92, Sum P(2) = 3.4e-92
Identities = 103/118 (87%), Positives = 111/118 (94%)
Query: 81 QVDWLTEKMREANFTVSSMHGDMPQKERDGIMKEFRSGTSRVLITTDVWARGIDVQQVSL 140
+VDWLT+KMREANFTVSSMHG+MPQKERD IM++FR G SRVLI+TDVWARGIDVQQVSL
Sbjct: 276 KVDWLTDKMREANFTVSSMHGEMPQKERDSIMQDFRQGNSRVLISTDVWARGIDVQQVSL 335
Query: 141 VINYDLPNNRELYIHRIGRSGRFGRKGVAISFVKSDDIRILRDIEQYYSTQIDEMPMN 198
VINYDLP NRE YIHRIGRSGRFGRKGVAI+FV SDD+RILRDIE YYSTQIDEMPMN
Sbjct: 336 VINYDLPTNRENYIHRIGRSGRFGRKGVAINFVTSDDVRILRDIELYYSTQIDEMPMN 393
Score = 394 (143.8 bits), Expect = 3.4e-92, Sum P(2) = 3.4e-92
Identities = 73/82 (89%), Positives = 79/82 (96%)
Query: 1 MNVQCHACIGGTNLSEDLRKLDYGQHVVSGTPGRVFDMIRRRVLRTRNIKMLVLDEADEM 60
MNVQCHACIGGTN+ ED+RKLDYGQHVVSGTPGRV DMIRRR LRTR+IKMLVLDEADE+
Sbjct: 120 MNVQCHACIGGTNIGEDIRKLDYGQHVVSGTPGRVADMIRRRHLRTRHIKMLVLDEADEL 179
Query: 61 LNKGFKEQIYDVYRYLPPATQV 82
LN+GF+EQIYDVYRYLPPATQV
Sbjct: 180 LNRGFREQIYDVYRYLPPATQV 201
>POMBASE|SPAC1F5.10 [details] [associations]
symbol:SPAC1F5.10 "ATP-dependent RNA helicase
(predicted)" species:4896 "Schizosaccharomyces pombe" [GO:0003723
"RNA binding" evidence=IEA] [GO:0004004 "ATP-dependent RNA helicase
activity" evidence=ISO] [GO:0005524 "ATP binding" evidence=IC]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005730 "nucleolus"
evidence=ISO] [GO:0005829 "cytosol" evidence=IDA] [GO:0006364 "rRNA
processing" evidence=ISO] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 PomBase:SPAC1F5.10 GO:GO:0005829
GO:GO:0005524 EMBL:CU329670 GO:GO:0005730 GenomeReviews:CU329670_GR
GO:GO:0003723 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0006364 GO:GO:0004004 eggNOG:COG0513 HOGENOM:HOG000268797
InterPro:IPR014014 PROSITE:PS51195 KO:K13025 OMA:EDWKFDT
OrthoDB:EOG4HTD1W PIR:T38085 RefSeq:NP_592863.1
ProteinModelPortal:Q10055 SMR:Q10055 PRIDE:Q10055
EnsemblFungi:SPAC1F5.10.1 GeneID:2541602 KEGG:spo:SPAC1F5.10
NextBio:20802696 Uniprot:Q10055
Length = 394
Score = 532 (192.3 bits), Expect = 1.9e-89, Sum P(2) = 1.9e-89
Identities = 100/118 (84%), Positives = 110/118 (93%)
Query: 81 QVDWLTEKMREANFTVSSMHGDMPQKERDGIMKEFRSGTSRVLITTDVWARGIDVQQVSL 140
+VDWLTEKMREANFTV+SMHG+MPQKERD IM++FR G SRVLI TD+WARGIDVQQVSL
Sbjct: 272 KVDWLTEKMREANFTVTSMHGEMPQKERDAIMQDFRQGNSRVLICTDIWARGIDVQQVSL 331
Query: 141 VINYDLPNNRELYIHRIGRSGRFGRKGVAISFVKSDDIRILRDIEQYYSTQIDEMPMN 198
VINYDLP NRE YIHRIGRSGRFGRKGVAI+FV ++D+RILRDIEQYYST IDEMPMN
Sbjct: 332 VINYDLPANRENYIHRIGRSGRFGRKGVAINFVTNEDVRILRDIEQYYSTVIDEMPMN 389
Score = 380 (138.8 bits), Expect = 1.9e-89, Sum P(2) = 1.9e-89
Identities = 68/82 (82%), Positives = 77/82 (93%)
Query: 1 MNVQCHACIGGTNLSEDLRKLDYGQHVVSGTPGRVFDMIRRRVLRTRNIKMLVLDEADEM 60
MNVQCHACIGGT++ D++KLDYGQHVVSGTPGRV DMIRRR LRTRN+KML+LDEADE+
Sbjct: 116 MNVQCHACIGGTSVGNDIKKLDYGQHVVSGTPGRVTDMIRRRNLRTRNVKMLILDEADEL 175
Query: 61 LNKGFKEQIYDVYRYLPPATQV 82
LN+GFKEQIYD+YRYLPP TQV
Sbjct: 176 LNQGFKEQIYDIYRYLPPGTQV 197
>TAIR|locus:2091191 [details] [associations]
symbol:EIF4A-III "eukaryotic initiation factor 4A-III"
species:3702 "Arabidopsis thaliana" [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=ISM;IDA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA;ISS] [GO:0005730 "nucleolus" evidence=IDA]
[GO:0016020 "membrane" evidence=IDA] [GO:0001666 "response to
hypoxia" evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005654 "nucleoplasm" evidence=IDA] [GO:0006397 "mRNA
processing" evidence=IPI] [GO:0016607 "nuclear speck" evidence=IDA]
[GO:0035145 "exon-exon junction complex" evidence=IDA]
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0005730 GO:GO:0016020
GO:GO:0016607 GO:GO:0001666 GO:GO:0006397 GO:GO:0003723
EMBL:AP000417 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0006364 GO:GO:0008026 GO:GO:0035145 eggNOG:COG0513
HOGENOM:HOG000268797 InterPro:IPR014014 PROSITE:PS51195 KO:K13025
OMA:EDWKFDT EMBL:AJ010456 EMBL:AY050367 EMBL:BT002207
IPI:IPI00522986 PIR:T51737 RefSeq:NP_188610.1 UniGene:At.22577
ProteinModelPortal:Q94A52 SMR:Q94A52 STRING:Q94A52 PaxDb:Q94A52
PRIDE:Q94A52 EnsemblPlants:AT3G19760.1 GeneID:821513
KEGG:ath:AT3G19760 GeneFarm:908 TAIR:At3g19760 InParanoid:Q94A52
PhylomeDB:Q94A52 ProtClustDB:CLSN2915442 Genevestigator:Q94A52
GermOnline:AT3G19760 Uniprot:Q94A52
Length = 408
Score = 560 (202.2 bits), Expect = 1.0e-86, Sum P(2) = 1.0e-86
Identities = 108/118 (91%), Positives = 113/118 (95%)
Query: 81 QVDWLTEKMREANFTVSSMHGDMPQKERDGIMKEFRSGTSRVLITTDVWARGIDVQQVSL 140
+VD+L+EKMR NFTVSSMHGDMPQKERD IM EFRSG SRVLITTDVWARGIDVQQVSL
Sbjct: 286 KVDYLSEKMRSHNFTVSSMHGDMPQKERDAIMNEFRSGDSRVLITTDVWARGIDVQQVSL 345
Query: 141 VINYDLPNNRELYIHRIGRSGRFGRKGVAISFVKSDDIRILRDIEQYYSTQIDEMPMN 198
VINYDLPNNRELYIHRIGRSGRFGRKGVAI+FVKSDDI+ILRDIEQYYSTQIDEMPMN
Sbjct: 346 VINYDLPNNRELYIHRIGRSGRFGRKGVAINFVKSDDIKILRDIEQYYSTQIDEMPMN 403
Score = 326 (119.8 bits), Expect = 1.0e-86, Sum P(2) = 1.0e-86
Identities = 59/81 (72%), Positives = 72/81 (88%)
Query: 2 NVQCHACIGGTNLSEDLRKLDYGQHVVSGTPGRVFDMIRRRVLRTRNIKMLVLDEADEML 61
N+Q HACIGG ++ ED+RKL++G HVVSGTPGRV DMI+RR LRTR IK+L+LDE+DEML
Sbjct: 131 NIQAHACIGGNSVGEDIRKLEHGVHVVSGTPGRVCDMIKRRSLRTRAIKLLILDESDEML 190
Query: 62 NKGFKEQIYDVYRYLPPATQV 82
++GFK+QIYDVYRYLPP QV
Sbjct: 191 SRGFKDQIYDVYRYLPPDLQV 211
>DICTYBASE|DDB_G0269192 [details] [associations]
symbol:tifA "eukaryotic translation initiation factor
4A" species:44689 "Dictyostelium discoideum" [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0006413
"translational initiation" evidence=IEA] [GO:0006412 "translation"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0003743
"translation initiation factor activity" evidence=IEA] [GO:0003723
"RNA binding" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0044351 "macropinocytosis" evidence=RCA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 dictyBase:DDB_G0269192 GO:GO:0005524 GO:GO:0005737
EMBL:AAFI02000005 GenomeReviews:CM000150_GR GO:GO:0003743
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195 HSSP:P10081
KO:K13025 OMA:LALGDFM RefSeq:XP_646270.1 ProteinModelPortal:Q55D61
SMR:Q55D61 PRIDE:Q55D61 EnsemblProtists:DDB0191511 GeneID:8617226
KEGG:ddi:DDB_G0269192 Uniprot:Q55D61
Length = 405
Score = 490 (177.5 bits), Expect = 4.1e-77, Sum P(2) = 4.1e-77
Identities = 96/118 (81%), Positives = 109/118 (92%)
Query: 81 QVDWLTEKMREANFTVSSMHGDMPQKERDGIMKEFRSGTSRVLITTDVWARGIDVQQVSL 140
+VD LTE+MR+ANFTV+SMHGDM QKER+ I+K FRSG +RVLITTD+ ARGIDVQQVSL
Sbjct: 283 KVDQLTEQMRDANFTVASMHGDMVQKEREEIIKSFRSGENRVLITTDILARGIDVQQVSL 342
Query: 141 VINYDLPNNRELYIHRIGRSGRFGRKGVAISFVKSDDIRILRDIEQYYSTQIDEMPMN 198
VINYDLP +RE YIHRIGRSGRFGRKGVAI+FVK+ DIRILRDIEQ+YSTQIDEMP+N
Sbjct: 343 VINYDLPIDRENYIHRIGRSGRFGRKGVAINFVKNSDIRILRDIEQFYSTQIDEMPVN 400
Score = 305 (112.4 bits), Expect = 4.1e-77, Sum P(2) = 4.1e-77
Identities = 55/82 (67%), Positives = 70/82 (85%)
Query: 1 MNVQCHACIGGTNLSEDLRKLDYGQHVVSGTPGRVFDMIRRRVLRTRNIKMLVLDEADEM 60
MN+Q HAC+GG NLS+D++KL+ G H+VSGTPGRV DMI R+ L TR+IKM++LDEADEM
Sbjct: 127 MNIQVHACVGGKNLSDDVKKLETGVHIVSGTPGRVLDMITRKSLPTRHIKMMILDEADEM 186
Query: 61 LNKGFKEQIYDVYRYLPPATQV 82
L+ GF++QI DVYRYLP TQ+
Sbjct: 187 LSLGFQQQINDVYRYLPNGTQI 208
>UNIPROTKB|F1NTS2 [details] [associations]
symbol:EIF4A3 "Eukaryotic initiation factor 4A-III"
species:9031 "Gallus gallus" [GO:0005524 "ATP binding"
evidence=IEA] [GO:0000184 "nuclear-transcribed mRNA catabolic
process, nonsense-mediated decay" evidence=IEA] [GO:0004004
"ATP-dependent RNA helicase activity" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0008143 "poly(A) RNA binding"
evidence=IEA] [GO:0017148 "negative regulation of translation"
evidence=IEA] [GO:0035145 "exon-exon junction complex"
evidence=IEA] [GO:0045727 "positive regulation of translation"
evidence=IEA] [GO:0071013 "catalytic step 2 spliceosome"
evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0005737
GO:GO:0000184 GO:GO:0017148 GO:GO:0045727 GO:GO:0071013
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0004004
GO:GO:0035145 InterPro:IPR014014 PROSITE:PS51195 GO:GO:0008143
GeneTree:ENSGT00530000062880 IPI:IPI00588271 EMBL:AADN02041229
EMBL:AADN02041230 ProteinModelPortal:F1NTS2
Ensembl:ENSGALT00000038969 OMA:KTRNGVD ArrayExpress:F1NTS2
Uniprot:F1NTS2
Length = 414
Score = 570 (205.7 bits), Expect = 5.2e-77, Sum P(2) = 5.2e-77
Identities = 107/118 (90%), Positives = 115/118 (97%)
Query: 81 QVDWLTEKMREANFTVSSMHGDMPQKERDGIMKEFRSGTSRVLITTDVWARGIDVQQVSL 140
+VDWLTEKMREANFTVSSMHGDMPQKER+ IMKEFRSG SRVLI+TDVWARG+DV QVSL
Sbjct: 292 KVDWLTEKMREANFTVSSMHGDMPQKERESIMKEFRSGASRVLISTDVWARGLDVPQVSL 351
Query: 141 VINYDLPNNRELYIHRIGRSGRFGRKGVAISFVKSDDIRILRDIEQYYSTQIDEMPMN 198
+INYDLPNNRELYIHRIGRSGR+GRKGVAI+FVK+DDIRILRDIEQYYSTQIDEMPMN
Sbjct: 352 IINYDLPNNRELYIHRIGRSGRYGRKGVAINFVKNDDIRILRDIEQYYSTQIDEMPMN 409
Score = 224 (83.9 bits), Expect = 5.2e-77, Sum P(2) = 5.2e-77
Identities = 49/79 (62%), Positives = 54/79 (68%)
Query: 4 QCHACIGGTNLSEDLRKLDYGQHVVSGTPGRVFDMIRRRVLRTRNIKMLVLDEADEMLNK 63
+ H +G DL +SG ++ MIRRR LRTR IKMLVLDEADEMLNK
Sbjct: 139 ELHKAMGSFKQEVDLPAGHEVARCISGIQLQLLYMIRRRSLRTRAIKMLVLDEADEMLNK 198
Query: 64 GFKEQIYDVYRYLPPATQV 82
GFKEQIYDVYRYLPPATQV
Sbjct: 199 GFKEQIYDVYRYLPPATQV 217
>UNIPROTKB|E1BSE5 [details] [associations]
symbol:EIF4A3 "Eukaryotic initiation factor 4A-III"
species:9031 "Gallus gallus" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014
PROSITE:PS51195 GeneTree:ENSGT00530000062880 EMBL:AADN02041229
EMBL:AADN02041230 IPI:IPI00819993 Ensembl:ENSGALT00000013903
ArrayExpress:E1BSE5 Uniprot:E1BSE5
Length = 402
Score = 570 (205.7 bits), Expect = 1.4e-76, Sum P(2) = 1.4e-76
Identities = 107/118 (90%), Positives = 115/118 (97%)
Query: 81 QVDWLTEKMREANFTVSSMHGDMPQKERDGIMKEFRSGTSRVLITTDVWARGIDVQQVSL 140
+VDWLTEKMREANFTVSSMHGDMPQKER+ IMKEFRSG SRVLI+TDVWARG+DV QVSL
Sbjct: 285 KVDWLTEKMREANFTVSSMHGDMPQKERESIMKEFRSGASRVLISTDVWARGLDVPQVSL 344
Query: 141 VINYDLPNNRELYIHRIGRSGRFGRKGVAISFVKSDDIRILRDIEQYYSTQIDEMPMN 198
+INYDLPNNRELYIHRIGRSGR+GRKGVAI+FVK+DDIRILRDIEQYYSTQIDEMPMN
Sbjct: 345 IINYDLPNNRELYIHRIGRSGRYGRKGVAINFVKNDDIRILRDIEQYYSTQIDEMPMN 402
Score = 220 (82.5 bits), Expect = 1.4e-76, Sum P(2) = 1.4e-76
Identities = 44/46 (95%), Positives = 44/46 (95%)
Query: 37 DMIRRRVLRTRNIKMLVLDEADEMLNKGFKEQIYDVYRYLPPATQV 82
DMIRRR LRTR IKMLVLDEADEMLNKGFKEQIYDVYRYLPPATQV
Sbjct: 165 DMIRRRSLRTRAIKMLVLDEADEMLNKGFKEQIYDVYRYLPPATQV 210
>ASPGD|ASPL0000037981 [details] [associations]
symbol:AN2932 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0005829 "cytosol"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0005737 EMBL:BN001306 EMBL:AACD01000051 GO:GO:0003743
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
eggNOG:COG0513 HOGENOM:HOG000268797 InterPro:IPR014014
PROSITE:PS51195 KO:K03257 OMA:TENDARQ RefSeq:XP_660536.1
PRIDE:Q5B948 GeneID:2874390 KEGG:ani:AN2932.2 OrthoDB:EOG4PG98F
Uniprot:Q5B948
Length = 398
Score = 476 (172.6 bits), Expect = 1.6e-73, Sum P(2) = 1.6e-73
Identities = 90/118 (76%), Positives = 106/118 (89%)
Query: 81 QVDWLTEKMREANFTVSSMHGDMPQKERDGIMKEFRSGTSRVLITTDVWARGIDVQQVSL 140
+VDWLT+K+ +FTVS+MHGDM Q +RD IMKEFRSG+SRVLI TD+ ARGIDVQQVSL
Sbjct: 276 KVDWLTDKLTARDFTVSAMHGDMEQAQRDVIMKEFRSGSSRVLIATDLLARGIDVQQVSL 335
Query: 141 VINYDLPNNRELYIHRIGRSGRFGRKGVAISFVKSDDIRILRDIEQYYSTQIDEMPMN 198
VINYDLP NRE YIHRIGR GRFGRKGVAI+FV +DD+R++R+IEQ+YSTQI+EMPMN
Sbjct: 336 VINYDLPANRENYIHRIGRGGRFGRKGVAINFVTADDVRMMREIEQFYSTQIEEMPMN 393
Score = 285 (105.4 bits), Expect = 1.6e-73, Sum P(2) = 1.6e-73
Identities = 52/89 (58%), Positives = 69/89 (77%)
Query: 1 MNVQCHACIGGTNLSEDLRKLDYGQHVVSGTPGRVFDMIRRRVLRTRNIKMLVLDEADEM 60
MN+QCHACIGGT + +D+ L G +V GTPGR+ DMI+RRVL+T +KM +LDEADEM
Sbjct: 120 MNIQCHACIGGTAVRDDMNALREGPQIVVGTPGRIHDMIQRRVLKTDQMKMFILDEADEM 179
Query: 61 LNKGFKEQIYDVYRYLPPATQVDWLTEKM 89
L++GF EQIYD+++ LP +TQV L+ M
Sbjct: 180 LSRGFTEQIYDIFQLLPQSTQVVLLSATM 208
>UNIPROTKB|A4QVP2 [details] [associations]
symbol:TIF1 "ATP-dependent RNA helicase eIF4A"
species:242507 "Magnaporthe oryzae 70-15" [GO:0005575
"cellular_component" evidence=ND] [GO:0043581 "mycelium
development" evidence=IEP] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0005737
GO:GO:0003743 EMBL:CM001231 GO:GO:0043581 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513
InterPro:IPR014014 PROSITE:PS51195 KO:K03257 OrthoDB:EOG4PG98F
RefSeq:XP_003711015.1 ProteinModelPortal:A4QVP2 SMR:A4QVP2
EnsemblFungi:MGG_04400T0 GeneID:2677872 KEGG:mgr:MGG_04400
Uniprot:A4QVP2
Length = 396
Score = 475 (172.3 bits), Expect = 1.6e-73, Sum P(2) = 1.6e-73
Identities = 90/118 (76%), Positives = 106/118 (89%)
Query: 81 QVDWLTEKMREANFTVSSMHGDMPQKERDGIMKEFRSGTSRVLITTDVWARGIDVQQVSL 140
+VDWLT+K+ +FTVS+MHGDM Q +RD IMKEFRSG+SRVLI TD+ ARGIDVQQVSL
Sbjct: 274 KVDWLTDKLTARDFTVSAMHGDMDQAQRDLIMKEFRSGSSRVLIATDLLARGIDVQQVSL 333
Query: 141 VINYDLPNNRELYIHRIGRSGRFGRKGVAISFVKSDDIRILRDIEQYYSTQIDEMPMN 198
VINYDLP NRE YIHRIGR GRFGRKGVAI+FV +DD+R++R+IEQ+YSTQI+EMPMN
Sbjct: 334 VINYDLPANRENYIHRIGRGGRFGRKGVAINFVTADDVRMMREIEQFYSTQIEEMPMN 391
Score = 286 (105.7 bits), Expect = 1.6e-73, Sum P(2) = 1.6e-73
Identities = 53/89 (59%), Positives = 70/89 (78%)
Query: 1 MNVQCHACIGGTNLSEDLRKLDYGQHVVSGTPGRVFDMIRRRVLRTRNIKMLVLDEADEM 60
MN++CHACIGGT++ +D++ L G VV GTPGRV DMI+RR L+T +KM VLDEADEM
Sbjct: 118 MNIECHACIGGTSVRDDMKALQDGPQVVVGTPGRVHDMIQRRFLKTDGMKMFVLDEADEM 177
Query: 61 LNKGFKEQIYDVYRYLPPATQVDWLTEKM 89
L++GF EQIYD+++ LP +TQV L+ M
Sbjct: 178 LSRGFTEQIYDIFQLLPQSTQVVLLSATM 206
>POMBASE|SPAC1006.07 [details] [associations]
symbol:SPAC1006.07 "translation initiation factor eIF4A
(predicted)" species:4896 "Schizosaccharomyces pombe" [GO:0002183
"cytoplasmic translational initiation" evidence=NAS] [GO:0003743
"translation initiation factor activity" evidence=ISO] [GO:0004004
"ATP-dependent RNA helicase activity" evidence=ISO] [GO:0005524
"ATP binding" evidence=IC] [GO:0005829 "cytosol" evidence=IDA]
[GO:0006413 "translational initiation" evidence=ISO] [GO:0016281
"eukaryotic translation initiation factor 4F complex" evidence=ISO]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 PomBase:SPAC1006.07 GO:GO:0005829 GO:GO:0005524
EMBL:CU329670 GenomeReviews:CU329670_GR GO:GO:0016281 GO:GO:0003743
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0004004
eggNOG:COG0513 HOGENOM:HOG000268797 InterPro:IPR014014
PROSITE:PS51195 GO:GO:0002183 KO:K03257 OrthoDB:EOG4PG98F
EMBL:X80796 EMBL:L40627 PIR:S71745 RefSeq:NP_594854.1
ProteinModelPortal:P47943 SMR:P47943 STRING:P47943 PRIDE:P47943
EnsemblFungi:SPAC1006.07.1 GeneID:2542948 KEGG:spo:SPAC1006.07
OMA:PILEMED NextBio:20803983 Uniprot:P47943
Length = 392
Score = 467 (169.5 bits), Expect = 1.1e-72, Sum P(2) = 1.1e-72
Identities = 86/118 (72%), Positives = 106/118 (89%)
Query: 81 QVDWLTEKMREANFTVSSMHGDMPQKERDGIMKEFRSGTSRVLITTDVWARGIDVQQVSL 140
+VDWLTE++ E +FTVSSMHGDM Q +RD +M EFR+G+SR+LITTD+ ARGIDVQQVSL
Sbjct: 270 KVDWLTEQLTERDFTVSSMHGDMDQAQRDTLMHEFRTGSSRILITTDLLARGIDVQQVSL 329
Query: 141 VINYDLPNNRELYIHRIGRSGRFGRKGVAISFVKSDDIRILRDIEQYYSTQIDEMPMN 198
VINYDLP NRE YIHRIGR GRFGRKGV+I+FV +DD+R++R+IEQ+Y+T I+EMPMN
Sbjct: 330 VINYDLPANRENYIHRIGRGGRFGRKGVSINFVTNDDVRMMREIEQFYNTHIEEMPMN 387
Score = 286 (105.7 bits), Expect = 1.1e-72, Sum P(2) = 1.1e-72
Identities = 54/89 (60%), Positives = 68/89 (76%)
Query: 1 MNVQCHACIGGTNLSEDLRKLDYGQHVVSGTPGRVFDMIRRRVLRTRNIKMLVLDEADEM 60
MNV+CHACIGGT + +D+ L G HVV GTPGRV DMI+RR L T ++M VLDEADEM
Sbjct: 114 MNVECHACIGGTLVRDDMAALQAGVHVVVGTPGRVHDMIQRRALPTDAVQMFVLDEADEM 173
Query: 61 LNKGFKEQIYDVYRYLPPATQVDWLTEKM 89
L++GFK+QIYD+++ LPP QV L+ M
Sbjct: 174 LSRGFKDQIYDIFQLLPPTAQVVLLSATM 202
>CGD|CAL0001638 [details] [associations]
symbol:FAL1 species:5476 "Candida albicans" [GO:0005730
"nucleolus" evidence=IEA] [GO:0097078 "FAl1-SGD1 complex"
evidence=IEA] [GO:0000462 "maturation of SSU-rRNA from tricistronic
rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=IEA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 CGD:CAL0001638 GO:GO:0005524 GO:GO:0005730
GO:GO:0003723 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
EMBL:AACQ01000041 EMBL:AACQ01000040 GO:GO:0006364 GO:GO:0008026
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195 EMBL:AJ250879
RefSeq:XP_718509.1 RefSeq:XP_718592.1 ProteinModelPortal:Q5A9Z6
SMR:Q5A9Z6 GeneID:3639739 GeneID:3639839 KEGG:cal:CaO19.10024
KEGG:cal:CaO19.2488 KO:K13025 Uniprot:Q5A9Z6
Length = 399
Score = 442 (160.7 bits), Expect = 1.4e-72, Sum P(2) = 1.4e-72
Identities = 81/118 (68%), Positives = 99/118 (83%)
Query: 81 QVDWLTEKMREANFTVSSMHGDMPQKERDGIMKEFRSGTSRVLITTDVWARGIDVQQVSL 140
+V+WL ++M++ NFTV +MHGDM Q ERD IM +FR G SRVLI+TDVWARGIDVQQVSL
Sbjct: 277 KVNWLADQMKKQNFTVVAMHGDMKQDERDSIMNDFRRGNSRVLISTDVWARGIDVQQVSL 336
Query: 141 VINYDLPNNRELYIHRIGRSGRFGRKGVAISFVKSDDIRILRDIEQYYSTQIDEMPMN 198
VINYDLP ++E YIHRIGRSGRFGRKG AI+ + DD+ L++ E+YYST+I EMPMN
Sbjct: 337 VINYDLPTDKENYIHRIGRSGRFGRKGTAINLITKDDVVTLKEFEKYYSTKIKEMPMN 394
Score = 310 (114.2 bits), Expect = 1.4e-72, Sum P(2) = 1.4e-72
Identities = 54/82 (65%), Positives = 70/82 (85%)
Query: 1 MNVQCHACIGGTNLSEDLRKLDYGQHVVSGTPGRVFDMIRRRVLRTRNIKMLVLDEADEM 60
MN+ HACIGG N+ ED++KL GQ +VSGTPGRV D+I+RR L+TRNIK+L+LDEADE+
Sbjct: 121 MNIHTHACIGGKNVGEDVKKLQQGQQIVSGTPGRVIDVIKRRNLQTRNIKVLILDEADEL 180
Query: 61 LNKGFKEQIYDVYRYLPPATQV 82
KGFKEQIY++Y++LPP+ QV
Sbjct: 181 FTKGFKEQIYEIYKHLPPSVQV 202
>GENEDB_PFALCIPARUM|PFD1070w [details] [associations]
symbol:PFD1070w "eukaryotic initiation factor,
putative" species:5833 "Plasmodium falciparum" [GO:0016281
"eukaryotic translation initiation factor 4F complex" evidence=ISS]
[GO:0003743 "translation initiation factor activity" evidence=ISS]
[GO:0004004 "ATP-dependent RNA helicase activity" evidence=ISS]
[GO:0006446 "regulation of translational initiation" evidence=ISS]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0006446 GO:GO:0016281
GO:GO:0003743 EMBL:AL844503 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0004004 HOGENOM:HOG000268797
InterPro:IPR014014 PROSITE:PS51195 HSSP:P10081 KO:K13025
OMA:EDWKFDT RefSeq:XP_001351530.1 ProteinModelPortal:Q8IFN9
SMR:Q8IFN9 EnsemblProtists:PFD1070w:mRNA GeneID:812458
KEGG:pfa:PFD1070w EuPathDB:PlasmoDB:PF3D7_0422700
ProtClustDB:CLSZ2436055 Uniprot:Q8IFN9
Length = 390
Score = 480 (174.0 bits), Expect = 6.0e-72, Sum P(2) = 6.0e-72
Identities = 90/118 (76%), Positives = 103/118 (87%)
Query: 81 QVDWLTEKMREANFTVSSMHGDMPQKERDGIMKEFRSGTSRVLITTDVWARGIDVQQVSL 140
+VDWLT+KM E+NFTV MH M Q ERD IM +FR RVLI+TD+W RG+DVQ+VSL
Sbjct: 268 KVDWLTKKMLESNFTVCKMHAGMSQSERDDIMLKFRQCKFRVLISTDIWGRGLDVQEVSL 327
Query: 141 VINYDLPNNRELYIHRIGRSGRFGRKGVAISFVKSDDIRILRDIEQYYSTQIDEMPMN 198
V+NYDLPN+RE YIHRIGRSGRFGRKGVAI+FVK+DDI+ILRDIEQYYSTQIDEMPMN
Sbjct: 328 VVNYDLPNSRESYIHRIGRSGRFGRKGVAINFVKNDDIKILRDIEQYYSTQIDEMPMN 385
Score = 266 (98.7 bits), Expect = 6.0e-72, Sum P(2) = 6.0e-72
Identities = 46/82 (56%), Positives = 65/82 (79%)
Query: 1 MNVQCHACIGGTNLSEDLRKLDYGQHVVSGTPGRVFDMIRRRVLRTRNIKMLVLDEADEM 60
++V + CIGG +S+D++ L+ G HV+SGTPGR++ M+ R L+ + IK LV+DEADEM
Sbjct: 112 IHVTIYCCIGGKKMSDDIKALNNGVHVISGTPGRIYHMLNLRHLKCKYIKQLVIDEADEM 171
Query: 61 LNKGFKEQIYDVYRYLPPATQV 82
LNKGFKEQ+YD+YR+L P TQ+
Sbjct: 172 LNKGFKEQVYDIYRFLSPNTQI 193
>UNIPROTKB|Q8IFN9 [details] [associations]
symbol:PFD1070w "Eukaryotic initiation factor, putative"
species:36329 "Plasmodium falciparum 3D7" [GO:0003743 "translation
initiation factor activity" evidence=ISS] [GO:0004004
"ATP-dependent RNA helicase activity" evidence=ISS] [GO:0006446
"regulation of translational initiation" evidence=ISS] [GO:0016281
"eukaryotic translation initiation factor 4F complex" evidence=ISS]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0006446 GO:GO:0016281
GO:GO:0003743 EMBL:AL844503 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0004004 HOGENOM:HOG000268797
InterPro:IPR014014 PROSITE:PS51195 HSSP:P10081 KO:K13025
OMA:EDWKFDT RefSeq:XP_001351530.1 ProteinModelPortal:Q8IFN9
SMR:Q8IFN9 EnsemblProtists:PFD1070w:mRNA GeneID:812458
KEGG:pfa:PFD1070w EuPathDB:PlasmoDB:PF3D7_0422700
ProtClustDB:CLSZ2436055 Uniprot:Q8IFN9
Length = 390
Score = 480 (174.0 bits), Expect = 6.0e-72, Sum P(2) = 6.0e-72
Identities = 90/118 (76%), Positives = 103/118 (87%)
Query: 81 QVDWLTEKMREANFTVSSMHGDMPQKERDGIMKEFRSGTSRVLITTDVWARGIDVQQVSL 140
+VDWLT+KM E+NFTV MH M Q ERD IM +FR RVLI+TD+W RG+DVQ+VSL
Sbjct: 268 KVDWLTKKMLESNFTVCKMHAGMSQSERDDIMLKFRQCKFRVLISTDIWGRGLDVQEVSL 327
Query: 141 VINYDLPNNRELYIHRIGRSGRFGRKGVAISFVKSDDIRILRDIEQYYSTQIDEMPMN 198
V+NYDLPN+RE YIHRIGRSGRFGRKGVAI+FVK+DDI+ILRDIEQYYSTQIDEMPMN
Sbjct: 328 VVNYDLPNSRESYIHRIGRSGRFGRKGVAINFVKNDDIKILRDIEQYYSTQIDEMPMN 385
Score = 266 (98.7 bits), Expect = 6.0e-72, Sum P(2) = 6.0e-72
Identities = 46/82 (56%), Positives = 65/82 (79%)
Query: 1 MNVQCHACIGGTNLSEDLRKLDYGQHVVSGTPGRVFDMIRRRVLRTRNIKMLVLDEADEM 60
++V + CIGG +S+D++ L+ G HV+SGTPGR++ M+ R L+ + IK LV+DEADEM
Sbjct: 112 IHVTIYCCIGGKKMSDDIKALNNGVHVISGTPGRIYHMLNLRHLKCKYIKQLVIDEADEM 171
Query: 61 LNKGFKEQIYDVYRYLPPATQV 82
LNKGFKEQ+YD+YR+L P TQ+
Sbjct: 172 LNKGFKEQVYDIYRFLSPNTQI 193
>TAIR|locus:2008296 [details] [associations]
symbol:AT1G51380 species:3702 "Arabidopsis thaliana"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=ISM] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA;ISS] [GO:0009560
"embryo sac egg cell differentiation" evidence=RCA]
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005524 GO:GO:0005730 EMBL:AC024261
GO:GO:0003723 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0006364 GO:GO:0008026 eggNOG:COG0513 HOGENOM:HOG000268797
InterPro:IPR014014 PROSITE:PS51195 EMBL:AC006085 KO:K13025
EMBL:AY058890 EMBL:AY079046 IPI:IPI00529522 PIR:H96551
RefSeq:NP_175549.1 UniGene:At.11244 ProteinModelPortal:Q9C8J1
SMR:Q9C8J1 PaxDb:Q9C8J1 PRIDE:Q9C8J1 EnsemblPlants:AT1G51380.1
GeneID:841562 KEGG:ath:AT1G51380 GeneFarm:1010 TAIR:At1g51380
InParanoid:Q9C8J1 OMA:DITNITH PhylomeDB:Q9C8J1
ProtClustDB:CLSN2912843 Genevestigator:Q9C8J1 GermOnline:AT1G51380
Uniprot:Q9C8J1
Length = 392
Score = 449 (163.1 bits), Expect = 1.1e-70, Sum P(2) = 1.1e-70
Identities = 86/116 (74%), Positives = 100/116 (86%)
Query: 81 QVDWLTEKMREANFTVSSMHGDMPQKERDGIMKEFRSGTSRVLITTDVWARGIDVQQVSL 140
+VDWLTEKMR +NF VSSMHGD QKERD IM +FRS SRVLI +DVWARGIDVQ VS
Sbjct: 273 KVDWLTEKMRSSNFIVSSMHGDKRQKERDDIMNQFRSFKSRVLIASDVWARGIDVQTVSH 332
Query: 141 VINYDLPNNRELYIHRIGRSGRFGRKGVAISFVKSDDIRILRDIEQYYSTQIDEMP 196
VINYD+PNN ELYIHRIGR+GRFGR+GVAI+FVKS D++ L+DIE++Y T+I EMP
Sbjct: 333 VINYDIPNNPELYIHRIGRAGRFGREGVAINFVKSSDMKDLKDIERHYGTKIREMP 388
Score = 285 (105.4 bits), Expect = 1.1e-70, Sum P(2) = 1.1e-70
Identities = 52/81 (64%), Positives = 67/81 (82%)
Query: 2 NVQCHACIGGTNLSEDLRKLDYGQHVVSGTPGRVFDMIRRRVLRTRNIKMLVLDEADEML 61
N+Q HACIGG ++ ED++KL+ G H VSGTPGRV+DMI+R L+T+ +K+LVLDE+DEML
Sbjct: 118 NIQAHACIGGKSIGEDIKKLERGVHAVSGTPGRVYDMIKRGSLQTKAVKLLVLDESDEML 177
Query: 62 NKGFKEQIYDVYRYLPPATQV 82
+KG K+QIYDVYR LP QV
Sbjct: 178 SKGLKDQIYDVYRALPHDIQV 198
Score = 42 (19.8 bits), Expect = 4.1e-45, Sum P(2) = 4.1e-45
Identities = 13/47 (27%), Positives = 25/47 (53%)
Query: 27 VVSGT-PGRVFDMIRRRVLRTRNIKMLVLDEADEMLNKGFKEQIYDV 72
++S T P + +M + T +++LV + DE+ +G K+ DV
Sbjct: 200 LISATLPQEILEMTEK--FMTDPVRILV--KPDELTLEGIKQYYVDV 242
>UNIPROTKB|Q3SZ65 [details] [associations]
symbol:EIF4A2 "Eukaryotic initiation factor 4A-II"
species:9913 "Bos taurus" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0003743 "translation initiation factor activity" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0003743 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513
HOGENOM:HOG000268797 InterPro:IPR014014 PROSITE:PS51195
HOVERGEN:HBG107989 GeneTree:ENSGT00530000062880 KO:K03257
OrthoDB:EOG4640C1 EMBL:BC103106 IPI:IPI00711238
RefSeq:NP_001029216.1 UniGene:Bt.13925 ProteinModelPortal:Q3SZ65
SMR:Q3SZ65 STRING:Q3SZ65 PRIDE:Q3SZ65 Ensembl:ENSBTAT00000019596
GeneID:286819 KEGG:bta:286819 CTD:1974 InParanoid:Q3SZ65
OMA:TENDARQ NextBio:20806473 ArrayExpress:Q3SZ65 Uniprot:Q3SZ65
Length = 407
Score = 477 (173.0 bits), Expect = 3.7e-70, Sum P(2) = 3.7e-70
Identities = 92/124 (74%), Positives = 106/124 (85%)
Query: 75 YLPPATQVDWLTEKMREANFTVSSMHGDMPQKERDGIMKEFRSGTSRVLITTDVWARGID 134
+L +VDWLTEKM +FTVS++HGDM QKERD IM+EFRSG+SRVLITTD+ ARGID
Sbjct: 279 FLNTRRKVDWLTEKMHARDFTVSALHGDMDQKERDVIMREFRSGSSRVLITTDLLARGID 338
Query: 135 VQQVSLVINYDLPNNRELYIHRIGRSGRFGRKGVAISFVKSDDIRILRDIEQYYSTQIDE 194
VQQVSLVINYDLP NRE YIHRIGR GRFGRKGVAI+FV +D RILRDIE +Y+T ++E
Sbjct: 339 VQQVSLVINYDLPTNRENYIHRIGRGGRFGRKGVAINFVTEEDKRILRDIETFYNTTVEE 398
Query: 195 MPMN 198
MPMN
Sbjct: 399 MPMN 402
Score = 252 (93.8 bits), Expect = 3.7e-70, Sum P(2) = 3.7e-70
Identities = 49/90 (54%), Positives = 65/90 (72%)
Query: 1 MNVQCHACIGGTNLSEDLRKLDY-GQHVVSGTPGRVFDMIRRRVLRTRNIKMLVLDEADE 59
M CHACIGGTN+ +++KL H+V GTPGRVFDM+ RR L + IKM VLDEADE
Sbjct: 128 MGATCHACIGGTNVRNEMQKLQAEAPHIVVGTPGRVFDMLNRRYLSPKWIKMFVLDEADE 187
Query: 60 MLNKGFKEQIYDVYRYLPPATQVDWLTEKM 89
ML++GFK+QIY++++ L + QV L+ M
Sbjct: 188 MLSRGFKDQIYEIFQKLNTSIQVVLLSATM 217
>UNIPROTKB|E2R3J1 [details] [associations]
symbol:EIF4A2 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
GeneTree:ENSGT00530000062880 KO:K03257 CTD:1974 OMA:TENDARQ
EMBL:AAEX03017297 RefSeq:XP_860499.2 ProteinModelPortal:E2R3J1
SMR:E2R3J1 PRIDE:E2R3J1 Ensembl:ENSCAFT00000021683 GeneID:488118
KEGG:cfa:488118 NextBio:20861546 Uniprot:E2R3J1
Length = 407
Score = 477 (173.0 bits), Expect = 3.7e-70, Sum P(2) = 3.7e-70
Identities = 92/124 (74%), Positives = 106/124 (85%)
Query: 75 YLPPATQVDWLTEKMREANFTVSSMHGDMPQKERDGIMKEFRSGTSRVLITTDVWARGID 134
+L +VDWLTEKM +FTVS++HGDM QKERD IM+EFRSG+SRVLITTD+ ARGID
Sbjct: 279 FLNTRRKVDWLTEKMHARDFTVSALHGDMDQKERDVIMREFRSGSSRVLITTDLLARGID 338
Query: 135 VQQVSLVINYDLPNNRELYIHRIGRSGRFGRKGVAISFVKSDDIRILRDIEQYYSTQIDE 194
VQQVSLVINYDLP NRE YIHRIGR GRFGRKGVAI+FV +D RILRDIE +Y+T ++E
Sbjct: 339 VQQVSLVINYDLPTNRENYIHRIGRGGRFGRKGVAINFVTEEDKRILRDIETFYNTTVEE 398
Query: 195 MPMN 198
MPMN
Sbjct: 399 MPMN 402
Score = 252 (93.8 bits), Expect = 3.7e-70, Sum P(2) = 3.7e-70
Identities = 49/90 (54%), Positives = 65/90 (72%)
Query: 1 MNVQCHACIGGTNLSEDLRKLDY-GQHVVSGTPGRVFDMIRRRVLRTRNIKMLVLDEADE 59
M CHACIGGTN+ +++KL H+V GTPGRVFDM+ RR L + IKM VLDEADE
Sbjct: 128 MGATCHACIGGTNVRNEMQKLQAEAPHIVVGTPGRVFDMLNRRYLSPKWIKMFVLDEADE 187
Query: 60 MLNKGFKEQIYDVYRYLPPATQVDWLTEKM 89
ML++GFK+QIY++++ L + QV L+ M
Sbjct: 188 MLSRGFKDQIYEIFQKLNTSIQVVLLSATM 217
>UNIPROTKB|Q14240 [details] [associations]
symbol:EIF4A2 "Eukaryotic initiation factor 4A-II"
species:9606 "Homo sapiens" [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0003743 "translation initiation factor
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0019048 "virus-host interaction" evidence=IEA] [GO:0004386
"helicase activity" evidence=TAS] [GO:0006446 "regulation of
translational initiation" evidence=TAS] [GO:0016281 "eukaryotic
translation initiation factor 4F complex" evidence=TAS] [GO:0000288
"nuclear-transcribed mRNA catabolic process,
deadenylation-dependent decay" evidence=TAS] [GO:0000289
"nuclear-transcribed mRNA poly(A) tail shortening" evidence=TAS]
[GO:0005829 "cytosol" evidence=TAS] [GO:0006412 "translation"
evidence=TAS] [GO:0006413 "translational initiation" evidence=TAS]
[GO:0010467 "gene expression" evidence=TAS] [GO:0016070 "RNA
metabolic process" evidence=TAS] [GO:0016071 "mRNA metabolic
process" evidence=TAS] [GO:0019221 "cytokine-mediated signaling
pathway" evidence=TAS] [GO:0044267 "cellular protein metabolic
process" evidence=TAS] [GO:0005515 "protein binding" evidence=IPI]
Reactome:REACT_71 Reactome:REACT_21257 Reactome:REACT_17015
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005829 GO:GO:0005524 Reactome:REACT_6900
GO:GO:0019048 GO:GO:0006446 GO:GO:0016281 EMBL:CH471052
GO:GO:0019221 GO:GO:0004386 GO:GO:0003743 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 GO:GO:0000289
eggNOG:COG0513 HOGENOM:HOG000268797 InterPro:IPR014014
PROSITE:PS51195 HOVERGEN:HBG107989 Reactome:REACT_1762 KO:K03257
CTD:1974 OMA:TENDARQ EMBL:D30655 EMBL:BT009860 EMBL:AC112907
EMBL:BC012547 EMBL:BC013708 EMBL:BC015842 EMBL:BC048105
IPI:IPI00328328 IPI:IPI00409717 RefSeq:NP_001958.2
UniGene:Hs.518475 UniGene:Hs.599481 PDB:3BOR PDBsum:3BOR
ProteinModelPortal:Q14240 SMR:Q14240 IntAct:Q14240 MINT:MINT-202114
STRING:Q14240 PhosphoSite:Q14240 DMDM:45645183 PaxDb:Q14240
PRIDE:Q14240 DNASU:1974 Ensembl:ENST00000323963
Ensembl:ENST00000440191 GeneID:1974 KEGG:hsa:1974 UCSC:uc003fqs.3
UCSC:uc003fqu.3 GeneCards:GC03P186539 H-InvDB:HIX0003899
HGNC:HGNC:3284 HPA:CAB011690 MIM:601102 neXtProt:NX_Q14240
PharmGKB:PA27712 InParanoid:Q14240 PhylomeDB:Q14240 ChiTaRS:EIF4A2
EvolutionaryTrace:Q14240 GenomeRNAi:1974 NextBio:7991
PMAP-CutDB:Q14240 ArrayExpress:Q14240 Bgee:Q14240 CleanEx:HS_EIF4A2
Genevestigator:Q14240 GermOnline:ENSG00000156976 Uniprot:Q14240
Length = 407
Score = 477 (173.0 bits), Expect = 3.7e-70, Sum P(2) = 3.7e-70
Identities = 92/124 (74%), Positives = 106/124 (85%)
Query: 75 YLPPATQVDWLTEKMREANFTVSSMHGDMPQKERDGIMKEFRSGTSRVLITTDVWARGID 134
+L +VDWLTEKM +FTVS++HGDM QKERD IM+EFRSG+SRVLITTD+ ARGID
Sbjct: 279 FLNTRRKVDWLTEKMHARDFTVSALHGDMDQKERDVIMREFRSGSSRVLITTDLLARGID 338
Query: 135 VQQVSLVINYDLPNNRELYIHRIGRSGRFGRKGVAISFVKSDDIRILRDIEQYYSTQIDE 194
VQQVSLVINYDLP NRE YIHRIGR GRFGRKGVAI+FV +D RILRDIE +Y+T ++E
Sbjct: 339 VQQVSLVINYDLPTNRENYIHRIGRGGRFGRKGVAINFVTEEDKRILRDIETFYNTTVEE 398
Query: 195 MPMN 198
MPMN
Sbjct: 399 MPMN 402
Score = 252 (93.8 bits), Expect = 3.7e-70, Sum P(2) = 3.7e-70
Identities = 49/90 (54%), Positives = 65/90 (72%)
Query: 1 MNVQCHACIGGTNLSEDLRKLDY-GQHVVSGTPGRVFDMIRRRVLRTRNIKMLVLDEADE 59
M CHACIGGTN+ +++KL H+V GTPGRVFDM+ RR L + IKM VLDEADE
Sbjct: 128 MGATCHACIGGTNVRNEMQKLQAEAPHIVVGTPGRVFDMLNRRYLSPKWIKMFVLDEADE 187
Query: 60 MLNKGFKEQIYDVYRYLPPATQVDWLTEKM 89
ML++GFK+QIY++++ L + QV L+ M
Sbjct: 188 MLSRGFKDQIYEIFQKLNTSIQVVLLSATM 217
>UNIPROTKB|Q9NZE6 [details] [associations]
symbol:EIF4A2 "BM-010" species:9606 "Homo sapiens"
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0003743 "translation initiation factor activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
EMBL:CH471052 GO:GO:0003743 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 HOGENOM:HOG000268797
HOVERGEN:HBG107989 HSSP:P10081 EMBL:AC112907 UniGene:Hs.518475
UniGene:Hs.599481 HGNC:HGNC:3284 ChiTaRS:EIF4A2 EMBL:AF208852
IPI:IPI00030296 SMR:Q9NZE6 STRING:Q9NZE6 Ensembl:ENST00000356531
UCSC:uc003fqv.3 Uniprot:Q9NZE6
Length = 312
Score = 477 (173.0 bits), Expect = 3.7e-70, Sum P(2) = 3.7e-70
Identities = 92/124 (74%), Positives = 106/124 (85%)
Query: 75 YLPPATQVDWLTEKMREANFTVSSMHGDMPQKERDGIMKEFRSGTSRVLITTDVWARGID 134
+L +VDWLTEKM +FTVS++HGDM QKERD IM+EFRSG+SRVLITTD+ ARGID
Sbjct: 184 FLNTRRKVDWLTEKMHARDFTVSALHGDMDQKERDVIMREFRSGSSRVLITTDLLARGID 243
Query: 135 VQQVSLVINYDLPNNRELYIHRIGRSGRFGRKGVAISFVKSDDIRILRDIEQYYSTQIDE 194
VQQVSLVINYDLP NRE YIHRIGR GRFGRKGVAI+FV +D RILRDIE +Y+T ++E
Sbjct: 244 VQQVSLVINYDLPTNRENYIHRIGRGGRFGRKGVAINFVTEEDKRILRDIETFYNTTVEE 303
Query: 195 MPMN 198
MPMN
Sbjct: 304 MPMN 307
Score = 252 (93.8 bits), Expect = 3.7e-70, Sum P(2) = 3.7e-70
Identities = 49/90 (54%), Positives = 65/90 (72%)
Query: 1 MNVQCHACIGGTNLSEDLRKLDY-GQHVVSGTPGRVFDMIRRRVLRTRNIKMLVLDEADE 59
M CHACIGGTN+ +++KL H+V GTPGRVFDM+ RR L + IKM VLDEADE
Sbjct: 33 MGATCHACIGGTNVRNEMQKLQAEAPHIVVGTPGRVFDMLNRRYLSPKWIKMFVLDEADE 92
Query: 60 MLNKGFKEQIYDVYRYLPPATQVDWLTEKM 89
ML++GFK+QIY++++ L + QV L+ M
Sbjct: 93 MLSRGFKDQIYEIFQKLNTSIQVVLLSATM 122
>UNIPROTKB|A6M930 [details] [associations]
symbol:EIF4A2 "Eukaryotic translation initiation factor 4A
isoform 2" species:9823 "Sus scrofa" [GO:0005524 "ATP binding"
evidence=IEA] [GO:0003743 "translation initiation factor activity"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0003743
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 HOVERGEN:HBG107989
GeneTree:ENSGT00530000062880 KO:K03257 CTD:1974 OMA:TENDARQ
EMBL:CU633961 EMBL:DQ351285 RefSeq:NP_001093665.1 UniGene:Ssc.10843
ProteinModelPortal:A6M930 SMR:A6M930 PRIDE:A6M930
Ensembl:ENSSSCT00000012915 GeneID:100101928 KEGG:ssc:100101928
Uniprot:A6M930
Length = 407
Score = 477 (173.0 bits), Expect = 3.7e-70, Sum P(2) = 3.7e-70
Identities = 92/124 (74%), Positives = 106/124 (85%)
Query: 75 YLPPATQVDWLTEKMREANFTVSSMHGDMPQKERDGIMKEFRSGTSRVLITTDVWARGID 134
+L +VDWLTEKM +FTVS++HGDM QKERD IM+EFRSG+SRVLITTD+ ARGID
Sbjct: 279 FLNTRRKVDWLTEKMHARDFTVSALHGDMDQKERDVIMREFRSGSSRVLITTDLLARGID 338
Query: 135 VQQVSLVINYDLPNNRELYIHRIGRSGRFGRKGVAISFVKSDDIRILRDIEQYYSTQIDE 194
VQQVSLVINYDLP NRE YIHRIGR GRFGRKGVAI+FV +D RILRDIE +Y+T ++E
Sbjct: 339 VQQVSLVINYDLPTNRENYIHRIGRGGRFGRKGVAINFVTEEDKRILRDIETFYNTTVEE 398
Query: 195 MPMN 198
MPMN
Sbjct: 399 MPMN 402
Score = 252 (93.8 bits), Expect = 3.7e-70, Sum P(2) = 3.7e-70
Identities = 49/90 (54%), Positives = 65/90 (72%)
Query: 1 MNVQCHACIGGTNLSEDLRKLDY-GQHVVSGTPGRVFDMIRRRVLRTRNIKMLVLDEADE 59
M CHACIGGTN+ +++KL H+V GTPGRVFDM+ RR L + IKM VLDEADE
Sbjct: 128 MGATCHACIGGTNVRNEMQKLQAEAPHIVVGTPGRVFDMLNRRYLSPKWIKMFVLDEADE 187
Query: 60 MLNKGFKEQIYDVYRYLPPATQVDWLTEKM 89
ML++GFK+QIY++++ L + QV L+ M
Sbjct: 188 MLSRGFKDQIYEIFQKLNTSIQVVLLSATM 217
>MGI|MGI:106906 [details] [associations]
symbol:Eif4a2 "eukaryotic translation initiation factor 4A2"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0003723 "RNA binding" evidence=IEA] [GO:0003743 "translation
initiation factor activity" evidence=IEA] [GO:0004386 "helicase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0006412 "translation" evidence=IEA] [GO:0006413 "translational
initiation" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0016787 "hydrolase activity"
evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 MGI:MGI:106906 GO:GO:0005524
GO:GO:0003743 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 eggNOG:COG0513 HOGENOM:HOG000268797
InterPro:IPR014014 PROSITE:PS51195 HOVERGEN:HBG107989
GeneTree:ENSGT00530000062880 KO:K03257 OrthoDB:EOG4640C1 CTD:1974
OMA:TENDARQ EMBL:X12507 EMBL:X14422 EMBL:X56953 EMBL:AK076509
EMBL:U64706 IPI:IPI00400432 IPI:IPI00409918 PIR:S00985
RefSeq:NP_038534.2 UniGene:Mm.260084 ProteinModelPortal:P10630
SMR:P10630 IntAct:P10630 STRING:P10630 PhosphoSite:P10630
PaxDb:P10630 PRIDE:P10630 Ensembl:ENSMUST00000023599
Ensembl:ENSMUST00000115341 GeneID:13682 KEGG:mmu:13682
NextBio:284442 Bgee:P10630 CleanEx:MM_EIF4A2 Genevestigator:P10630
GermOnline:ENSMUSG00000022884 Uniprot:P10630
Length = 407
Score = 477 (173.0 bits), Expect = 3.7e-70, Sum P(2) = 3.7e-70
Identities = 92/124 (74%), Positives = 106/124 (85%)
Query: 75 YLPPATQVDWLTEKMREANFTVSSMHGDMPQKERDGIMKEFRSGTSRVLITTDVWARGID 134
+L +VDWLTEKM +FTVS++HGDM QKERD IM+EFRSG+SRVLITTD+ ARGID
Sbjct: 279 FLNTRRKVDWLTEKMHARDFTVSALHGDMDQKERDVIMREFRSGSSRVLITTDLLARGID 338
Query: 135 VQQVSLVINYDLPNNRELYIHRIGRSGRFGRKGVAISFVKSDDIRILRDIEQYYSTQIDE 194
VQQVSLVINYDLP NRE YIHRIGR GRFGRKGVAI+FV +D RILRDIE +Y+T ++E
Sbjct: 339 VQQVSLVINYDLPTNRENYIHRIGRGGRFGRKGVAINFVTEEDKRILRDIETFYNTTVEE 398
Query: 195 MPMN 198
MPMN
Sbjct: 399 MPMN 402
Score = 252 (93.8 bits), Expect = 3.7e-70, Sum P(2) = 3.7e-70
Identities = 49/90 (54%), Positives = 65/90 (72%)
Query: 1 MNVQCHACIGGTNLSEDLRKLDY-GQHVVSGTPGRVFDMIRRRVLRTRNIKMLVLDEADE 59
M CHACIGGTN+ +++KL H+V GTPGRVFDM+ RR L + IKM VLDEADE
Sbjct: 128 MGATCHACIGGTNVRNEMQKLQAEAPHIVVGTPGRVFDMLNRRYLSPKWIKMFVLDEADE 187
Query: 60 MLNKGFKEQIYDVYRYLPPATQVDWLTEKM 89
ML++GFK+QIY++++ L + QV L+ M
Sbjct: 188 MLSRGFKDQIYEIFQKLNTSIQVVLLSATM 217
>RGD|1309225 [details] [associations]
symbol:Eif4a2 "eukaryotic translation initiation factor 4A2"
species:10116 "Rattus norvegicus" [GO:0003743 "translation
initiation factor activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 RGD:1309225 GO:GO:0005524
GO:GO:0003743 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 eggNOG:COG0513 HOGENOM:HOG000268797
InterPro:IPR014014 PROSITE:PS51195 HOVERGEN:HBG107989 HSSP:P60842
KO:K03257 OrthoDB:EOG4640C1 CTD:1974 EMBL:BC085859 IPI:IPI00193595
RefSeq:NP_001008336.1 UniGene:Rn.143972 ProteinModelPortal:Q5RKI1
SMR:Q5RKI1 STRING:Q5RKI1 PhosphoSite:Q5RKI1
World-2DPAGE:0004:Q5RKI1 PRIDE:Q5RKI1 GeneID:303831 KEGG:rno:303831
UCSC:RGD:1309225 InParanoid:Q5RKI1 NextBio:652169
ArrayExpress:Q5RKI1 Genevestigator:Q5RKI1
GermOnline:ENSRNOG00000001815 Uniprot:Q5RKI1
Length = 407
Score = 477 (173.0 bits), Expect = 3.7e-70, Sum P(2) = 3.7e-70
Identities = 92/124 (74%), Positives = 106/124 (85%)
Query: 75 YLPPATQVDWLTEKMREANFTVSSMHGDMPQKERDGIMKEFRSGTSRVLITTDVWARGID 134
+L +VDWLTEKM +FTVS++HGDM QKERD IM+EFRSG+SRVLITTD+ ARGID
Sbjct: 279 FLNTRRKVDWLTEKMHARDFTVSALHGDMDQKERDVIMREFRSGSSRVLITTDLLARGID 338
Query: 135 VQQVSLVINYDLPNNRELYIHRIGRSGRFGRKGVAISFVKSDDIRILRDIEQYYSTQIDE 194
VQQVSLVINYDLP NRE YIHRIGR GRFGRKGVAI+FV +D RILRDIE +Y+T ++E
Sbjct: 339 VQQVSLVINYDLPTNRENYIHRIGRGGRFGRKGVAINFVTEEDKRILRDIETFYNTTVEE 398
Query: 195 MPMN 198
MPMN
Sbjct: 399 MPMN 402
Score = 252 (93.8 bits), Expect = 3.7e-70, Sum P(2) = 3.7e-70
Identities = 49/90 (54%), Positives = 65/90 (72%)
Query: 1 MNVQCHACIGGTNLSEDLRKLDY-GQHVVSGTPGRVFDMIRRRVLRTRNIKMLVLDEADE 59
M CHACIGGTN+ +++KL H+V GTPGRVFDM+ RR L + IKM VLDEADE
Sbjct: 128 MGATCHACIGGTNVRNEMQKLQAEAPHIVVGTPGRVFDMLNRRYLSPKWIKMFVLDEADE 187
Query: 60 MLNKGFKEQIYDVYRYLPPATQVDWLTEKM 89
ML++GFK+QIY++++ L + QV L+ M
Sbjct: 188 MLSRGFKDQIYEIFQKLNTSIQVVLLSATM 217
>UNIPROTKB|F1LP27 [details] [associations]
symbol:Eif4a2 "Eukaryotic initiation factor 4A-II"
species:10116 "Rattus norvegicus" [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 RGD:1309225 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
IPI:IPI00949972 Ensembl:ENSRNOT00000066369 ArrayExpress:F1LP27
Uniprot:F1LP27
Length = 312
Score = 477 (173.0 bits), Expect = 3.7e-70, Sum P(2) = 3.7e-70
Identities = 92/124 (74%), Positives = 106/124 (85%)
Query: 75 YLPPATQVDWLTEKMREANFTVSSMHGDMPQKERDGIMKEFRSGTSRVLITTDVWARGID 134
+L +VDWLTEKM +FTVS++HGDM QKERD IM+EFRSG+SRVLITTD+ ARGID
Sbjct: 184 FLNTRRKVDWLTEKMHARDFTVSALHGDMDQKERDVIMREFRSGSSRVLITTDLLARGID 243
Query: 135 VQQVSLVINYDLPNNRELYIHRIGRSGRFGRKGVAISFVKSDDIRILRDIEQYYSTQIDE 194
VQQVSLVINYDLP NRE YIHRIGR GRFGRKGVAI+FV +D RILRDIE +Y+T ++E
Sbjct: 244 VQQVSLVINYDLPTNRENYIHRIGRGGRFGRKGVAINFVTEEDKRILRDIETFYNTTVEE 303
Query: 195 MPMN 198
MPMN
Sbjct: 304 MPMN 307
Score = 252 (93.8 bits), Expect = 3.7e-70, Sum P(2) = 3.7e-70
Identities = 49/90 (54%), Positives = 65/90 (72%)
Query: 1 MNVQCHACIGGTNLSEDLRKLDY-GQHVVSGTPGRVFDMIRRRVLRTRNIKMLVLDEADE 59
M CHACIGGTN+ +++KL H+V GTPGRVFDM+ RR L + IKM VLDEADE
Sbjct: 33 MGATCHACIGGTNVRNEMQKLQAEAPHIVVGTPGRVFDMLNRRYLSPKWIKMFVLDEADE 92
Query: 60 MLNKGFKEQIYDVYRYLPPATQVDWLTEKM 89
ML++GFK+QIY++++ L + QV L+ M
Sbjct: 93 MLSRGFKDQIYEIFQKLNTSIQVVLLSATM 122
>UNIPROTKB|F8WFX2 [details] [associations]
symbol:Eif4a2 "Eukaryotic initiation factor 4A-II"
species:10116 "Rattus norvegicus" [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 RGD:1309225 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 GeneTree:ENSGT00530000062880
OMA:TENDARQ IPI:IPI00193595 ProteinModelPortal:F8WFX2 PRIDE:F8WFX2
Ensembl:ENSRNOT00000002484 Uniprot:F8WFX2
Length = 408
Score = 477 (173.0 bits), Expect = 3.7e-70, Sum P(2) = 3.7e-70
Identities = 92/124 (74%), Positives = 106/124 (85%)
Query: 75 YLPPATQVDWLTEKMREANFTVSSMHGDMPQKERDGIMKEFRSGTSRVLITTDVWARGID 134
+L +VDWLTEKM +FTVS++HGDM QKERD IM+EFRSG+SRVLITTD+ ARGID
Sbjct: 280 FLNTRRKVDWLTEKMHARDFTVSALHGDMDQKERDVIMREFRSGSSRVLITTDLLARGID 339
Query: 135 VQQVSLVINYDLPNNRELYIHRIGRSGRFGRKGVAISFVKSDDIRILRDIEQYYSTQIDE 194
VQQVSLVINYDLP NRE YIHRIGR GRFGRKGVAI+FV +D RILRDIE +Y+T ++E
Sbjct: 340 VQQVSLVINYDLPTNRENYIHRIGRGGRFGRKGVAINFVTEEDKRILRDIETFYNTTVEE 399
Query: 195 MPMN 198
MPMN
Sbjct: 400 MPMN 403
Score = 252 (93.8 bits), Expect = 3.7e-70, Sum P(2) = 3.7e-70
Identities = 49/90 (54%), Positives = 65/90 (72%)
Query: 1 MNVQCHACIGGTNLSEDLRKLDY-GQHVVSGTPGRVFDMIRRRVLRTRNIKMLVLDEADE 59
M CHACIGGTN+ +++KL H+V GTPGRVFDM+ RR L + IKM VLDEADE
Sbjct: 129 MGATCHACIGGTNVRNEMQKLQAEAPHIVVGTPGRVFDMLNRRYLSPKWIKMFVLDEADE 188
Query: 60 MLNKGFKEQIYDVYRYLPPATQVDWLTEKM 89
ML++GFK+QIY++++ L + QV L+ M
Sbjct: 189 MLSRGFKDQIYEIFQKLNTSIQVVLLSATM 218
>UNIPROTKB|Q8JFP1 [details] [associations]
symbol:EIF4A2 "Eukaryotic initiation factor 4A-II"
species:9031 "Gallus gallus" [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0003743 "translation initiation factor
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0003743 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513
HOGENOM:HOG000268797 InterPro:IPR014014 PROSITE:PS51195
HOVERGEN:HBG107989 GeneTree:ENSGT00530000062880 HSSP:P60842
KO:K03257 OrthoDB:EOG4640C1 CTD:1974 OMA:TENDARQ EMBL:AF515726
EMBL:AJ720280 IPI:IPI00588868 RefSeq:NP_989880.1 UniGene:Gga.4580
ProteinModelPortal:Q8JFP1 SMR:Q8JFP1 STRING:Q8JFP1 PRIDE:Q8JFP1
Ensembl:ENSGALT00000014135 Ensembl:ENSGALT00000039726 GeneID:395232
KEGG:gga:395232 InParanoid:Q8JFP1 NextBio:20815321
ArrayExpress:Q8JFP1 Uniprot:Q8JFP1
Length = 407
Score = 477 (173.0 bits), Expect = 6.0e-70, Sum P(2) = 6.0e-70
Identities = 92/124 (74%), Positives = 106/124 (85%)
Query: 75 YLPPATQVDWLTEKMREANFTVSSMHGDMPQKERDGIMKEFRSGTSRVLITTDVWARGID 134
+L +VDWLTEKM +FTVS++HGDM QKERD IM+EFRSG+SRVLITTD+ ARGID
Sbjct: 279 FLNTRRKVDWLTEKMHARDFTVSALHGDMDQKERDVIMREFRSGSSRVLITTDLLARGID 338
Query: 135 VQQVSLVINYDLPNNRELYIHRIGRSGRFGRKGVAISFVKSDDIRILRDIEQYYSTQIDE 194
VQQVSLVINYDLP NRE YIHRIGR GRFGRKGVAI+FV +D RILRDIE +Y+T ++E
Sbjct: 339 VQQVSLVINYDLPTNRENYIHRIGRGGRFGRKGVAINFVTEEDKRILRDIETFYNTTVEE 398
Query: 195 MPMN 198
MPMN
Sbjct: 399 MPMN 402
Score = 250 (93.1 bits), Expect = 6.0e-70, Sum P(2) = 6.0e-70
Identities = 49/90 (54%), Positives = 64/90 (71%)
Query: 1 MNVQCHACIGGTNLSEDLRKLDY-GQHVVSGTPGRVFDMIRRRVLRTRNIKMLVLDEADE 59
M CHACIGGTN+ +++KL H+V GTPGRVFDM+ RR L + IKM VLDEADE
Sbjct: 128 MGATCHACIGGTNVRNEMQKLQAEAPHIVVGTPGRVFDMLNRRYLSPKWIKMFVLDEADE 187
Query: 60 MLNKGFKEQIYDVYRYLPPATQVDWLTEKM 89
ML++GFK+QIY++++ L QV L+ M
Sbjct: 188 MLSRGFKDQIYEIFQKLSTNIQVVLLSATM 217
>ZFIN|ZDB-GENE-040426-2802 [details] [associations]
symbol:eif4a2 "eukaryotic translation initiation
factor 4A, isoform 2" species:7955 "Danio rerio" [GO:0003676
"nucleic acid binding" evidence=IEA] [GO:0004386 "helicase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0003743 "translation
initiation factor activity" evidence=IEA] [GO:0006413
"translational initiation" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490
ZFIN:ZDB-GENE-040426-2802 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 GeneTree:ENSGT00530000062880
EMBL:CT027646 EMBL:CU929049 IPI:IPI00507769
ProteinModelPortal:F1R166 Ensembl:ENSDART00000130781
ArrayExpress:F1R166 Bgee:F1R166 Uniprot:F1R166
Length = 411
Score = 476 (172.6 bits), Expect = 6.0e-70, Sum P(2) = 6.0e-70
Identities = 92/124 (74%), Positives = 106/124 (85%)
Query: 75 YLPPATQVDWLTEKMREANFTVSSMHGDMPQKERDGIMKEFRSGTSRVLITTDVWARGID 134
+L +VDWLTEKM +FTVS++HGDM QKERD IM+EFRSG+SRVLITTD+ ARGID
Sbjct: 283 FLNTRRKVDWLTEKMHARDFTVSALHGDMDQKERDIIMREFRSGSSRVLITTDLLARGID 342
Query: 135 VQQVSLVINYDLPNNRELYIHRIGRSGRFGRKGVAISFVKSDDIRILRDIEQYYSTQIDE 194
VQQVSLVINYDLP NRE YIHRIGR GRFGRKGVAI+FV +D RILRDIE +Y+T ++E
Sbjct: 343 VQQVSLVINYDLPTNRENYIHRIGRGGRFGRKGVAINFVTEEDKRILRDIETFYNTTVEE 402
Query: 195 MPMN 198
MPMN
Sbjct: 403 MPMN 406
Score = 251 (93.4 bits), Expect = 6.0e-70, Sum P(2) = 6.0e-70
Identities = 49/90 (54%), Positives = 64/90 (71%)
Query: 1 MNVQCHACIGGTNLSEDLRKLDY-GQHVVSGTPGRVFDMIRRRVLRTRNIKMLVLDEADE 59
M CHACIGGTN+ +++KL H+V GTPGRVFDM+ RR L + IKM VLDEADE
Sbjct: 132 MGASCHACIGGTNVRNEMQKLQAEAPHIVVGTPGRVFDMLNRRYLSPKWIKMFVLDEADE 191
Query: 60 MLNKGFKEQIYDVYRYLPPATQVDWLTEKM 89
ML++GFK+QIY++++ L QV L+ M
Sbjct: 192 MLSRGFKDQIYEIFQKLSTNIQVVLLSATM 221
>ZFIN|ZDB-GENE-031030-2 [details] [associations]
symbol:eif4a1a "eukaryotic translation initiation
factor 4A, isoform 1A" species:7955 "Danio rerio" [GO:0004386
"helicase activity" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0003743 "translation
initiation factor activity" evidence=IEA] [GO:0006413
"translational initiation" evidence=IEA] InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS51194
SMART:SM00490 ZFIN:ZDB-GENE-031030-2 GO:GO:0005524 GO:GO:0003743
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
HOGENOM:HOG000268797 InterPro:IPR014014 PROSITE:PS51195
HOVERGEN:HBG107989 HSSP:P10081 GeneTree:ENSGT00530000062880
KO:K03257 OMA:IKMFILD OrthoDB:EOG4640C1 EMBL:CR848032 EMBL:BC048899
IPI:IPI00502344 RefSeq:NP_938180.1 UniGene:Dr.75120 SMR:Q802C9
STRING:Q802C9 Ensembl:ENSDART00000058913 GeneID:386634
KEGG:dre:386634 CTD:386634 InParanoid:Q802C9 NextBio:20813962
Uniprot:Q802C9
Length = 406
Score = 470 (170.5 bits), Expect = 6.0e-70, Sum P(2) = 6.0e-70
Identities = 90/118 (76%), Positives = 102/118 (86%)
Query: 81 QVDWLTEKMREANFTVSSMHGDMPQKERDGIMKEFRSGTSRVLITTDVWARGIDVQQVSL 140
+VDWLTEKM +FTVS++HGDM QKERD IMKEFRSG+SRVLITTD+ ARGIDVQQVSL
Sbjct: 284 KVDWLTEKMHARDFTVSALHGDMEQKERDVIMKEFRSGSSRVLITTDLLARGIDVQQVSL 343
Query: 141 VINYDLPNNRELYIHRIGRSGRFGRKGVAISFVKSDDIRILRDIEQYYSTQIDEMPMN 198
VINYDLP NRE YIHRIGR GRFGRKGVAI+ + DD R LRDIE +Y+T ++EMPMN
Sbjct: 344 VINYDLPTNRENYIHRIGRGGRFGRKGVAINMITEDDKRTLRDIETFYNTTVEEMPMN 401
Score = 257 (95.5 bits), Expect = 6.0e-70, Sum P(2) = 6.0e-70
Identities = 51/99 (51%), Positives = 68/99 (68%)
Query: 1 MNVQCHACIGGTNLSEDLRKLDYG-QHVVSGTPGRVFDMIRRRVLRTRNIKMLVLDEADE 59
M CHACIGGTN+ D++KL H+V GTPGRVFDM+ RR L + IKM LDEADE
Sbjct: 127 MGATCHACIGGTNVRNDVQKLQADVPHIVVGTPGRVFDMLNRRYLSPKYIKMFALDEADE 186
Query: 60 MLNKGFKEQIYDVYRYLPPATQVDWLTEKMREANFTVSS 98
ML++GFK+QIY++++ L TQV L+ M + V++
Sbjct: 187 MLSRGFKDQIYEIFQKLATDTQVILLSATMPQEVLEVTT 225
>UNIPROTKB|Q3SZ54 [details] [associations]
symbol:EIF4A1 "Eukaryotic initiation factor 4A-I"
species:9913 "Bos taurus" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0003743 "translation initiation factor activity" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0003743 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513
HOGENOM:HOG000268797 InterPro:IPR014014 PROSITE:PS51195
HOVERGEN:HBG107989 GeneTree:ENSGT00530000062880 EMBL:BC103130
IPI:IPI00698793 RefSeq:NP_001029400.1 UniGene:Bt.14169
ProteinModelPortal:Q3SZ54 SMR:Q3SZ54 STRING:Q3SZ54 PRIDE:Q3SZ54
Ensembl:ENSBTAT00000000144 GeneID:504958 KEGG:bta:504958 CTD:1973
InParanoid:Q3SZ54 KO:K03257 OMA:IKMFILD OrthoDB:EOG4640C1
NextBio:20866906 Uniprot:Q3SZ54
Length = 406
Score = 466 (169.1 bits), Expect = 7.7e-70, Sum P(2) = 7.7e-70
Identities = 90/118 (76%), Positives = 102/118 (86%)
Query: 81 QVDWLTEKMREANFTVSSMHGDMPQKERDGIMKEFRSGTSRVLITTDVWARGIDVQQVSL 140
+VDWLTEKM +FTVS+MHGDM QKERD IM+EFRSG+SRVLITTD+ ARGIDVQQVSL
Sbjct: 284 KVDWLTEKMHARDFTVSAMHGDMDQKERDVIMREFRSGSSRVLITTDLLARGIDVQQVSL 343
Query: 141 VINYDLPNNRELYIHRIGRSGRFGRKGVAISFVKSDDIRILRDIEQYYSTQIDEMPMN 198
VINYDLP NRE YIHRIGR GRFGRKGVAI+ V +D R LRDIE +Y+T I+EMP+N
Sbjct: 344 VINYDLPTNRENYIHRIGRGGRFGRKGVAINMVTEEDKRTLRDIETFYNTSIEEMPLN 401
Score = 260 (96.6 bits), Expect = 7.7e-70, Sum P(2) = 7.7e-70
Identities = 50/90 (55%), Positives = 65/90 (72%)
Query: 1 MNVQCHACIGGTNLSEDLRKLDY-GQHVVSGTPGRVFDMIRRRVLRTRNIKMLVLDEADE 59
M CHACIGGTN+ +++KL H++ GTPGRVFDM+ RR L + IKM VLDEADE
Sbjct: 127 MGASCHACIGGTNVRAEVQKLQMEAPHIIVGTPGRVFDMLNRRYLSPKYIKMFVLDEADE 186
Query: 60 MLNKGFKEQIYDVYRYLPPATQVDWLTEKM 89
ML++GFK+QIYD+++ L TQV L+ M
Sbjct: 187 MLSRGFKDQIYDIFQKLNSNTQVVLLSATM 216
>UNIPROTKB|F1P895 [details] [associations]
symbol:EIF4A1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
GeneTree:ENSGT00530000062880 OMA:PILEMED EMBL:AAEX03003619
EMBL:AAEX03003621 EMBL:AAEX03003620 Ensembl:ENSCAFT00000026357
Uniprot:F1P895
Length = 406
Score = 466 (169.1 bits), Expect = 7.7e-70, Sum P(2) = 7.7e-70
Identities = 90/118 (76%), Positives = 102/118 (86%)
Query: 81 QVDWLTEKMREANFTVSSMHGDMPQKERDGIMKEFRSGTSRVLITTDVWARGIDVQQVSL 140
+VDWLTEKM +FTVS+MHGDM QKERD IM+EFRSG+SRVLITTD+ ARGIDVQQVSL
Sbjct: 284 KVDWLTEKMHARDFTVSAMHGDMDQKERDVIMREFRSGSSRVLITTDLLARGIDVQQVSL 343
Query: 141 VINYDLPNNRELYIHRIGRSGRFGRKGVAISFVKSDDIRILRDIEQYYSTQIDEMPMN 198
VINYDLP NRE YIHRIGR GRFGRKGVAI+ V +D R LRDIE +Y+T I+EMP+N
Sbjct: 344 VINYDLPTNRENYIHRIGRGGRFGRKGVAINMVTEEDKRTLRDIETFYNTSIEEMPLN 401
Score = 260 (96.6 bits), Expect = 7.7e-70, Sum P(2) = 7.7e-70
Identities = 50/90 (55%), Positives = 65/90 (72%)
Query: 1 MNVQCHACIGGTNLSEDLRKLDY-GQHVVSGTPGRVFDMIRRRVLRTRNIKMLVLDEADE 59
M CHACIGGTN+ +++KL H++ GTPGRVFDM+ RR L + IKM VLDEADE
Sbjct: 127 MGASCHACIGGTNVRAEVQKLQMEAPHIIVGTPGRVFDMLNRRYLSPKYIKMFVLDEADE 186
Query: 60 MLNKGFKEQIYDVYRYLPPATQVDWLTEKM 89
ML++GFK+QIYD+++ L TQV L+ M
Sbjct: 187 MLSRGFKDQIYDIFQKLNSNTQVVLLSATM 216
>UNIPROTKB|J9NU36 [details] [associations]
symbol:EIF4A1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 GeneTree:ENSGT00530000062880 EMBL:AAEX03006506
EMBL:AAEX03006505 Ensembl:ENSCAFT00000049437 Uniprot:J9NU36
Length = 423
Score = 466 (169.1 bits), Expect = 7.7e-70, Sum P(2) = 7.7e-70
Identities = 90/118 (76%), Positives = 102/118 (86%)
Query: 81 QVDWLTEKMREANFTVSSMHGDMPQKERDGIMKEFRSGTSRVLITTDVWARGIDVQQVSL 140
+VDWLTEKM +FTVS+MHGDM QKERD IM+EFRSG+SRVLITTD+ ARGIDVQQVSL
Sbjct: 301 KVDWLTEKMHARDFTVSAMHGDMDQKERDVIMREFRSGSSRVLITTDLLARGIDVQQVSL 360
Query: 141 VINYDLPNNRELYIHRIGRSGRFGRKGVAISFVKSDDIRILRDIEQYYSTQIDEMPMN 198
VINYDLP NRE YIHRIGR GRFGRKGVAI+ V +D R LRDIE +Y+T I+EMP+N
Sbjct: 361 VINYDLPTNRENYIHRIGRGGRFGRKGVAINMVTEEDKRTLRDIETFYNTSIEEMPLN 418
Score = 260 (96.6 bits), Expect = 7.7e-70, Sum P(2) = 7.7e-70
Identities = 50/90 (55%), Positives = 65/90 (72%)
Query: 1 MNVQCHACIGGTNLSEDLRKLDY-GQHVVSGTPGRVFDMIRRRVLRTRNIKMLVLDEADE 59
M CHACIGGTN+ +++KL H++ GTPGRVFDM+ RR L + IKM VLDEADE
Sbjct: 144 MGASCHACIGGTNVRAEVQKLQMEAPHIIVGTPGRVFDMLNRRYLSPKYIKMFVLDEADE 203
Query: 60 MLNKGFKEQIYDVYRYLPPATQVDWLTEKM 89
ML++GFK+QIYD+++ L TQV L+ M
Sbjct: 204 MLSRGFKDQIYDIFQKLNSNTQVVLLSATM 233
>UNIPROTKB|J9NY67 [details] [associations]
symbol:EIF4A1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
GeneTree:ENSGT00530000062880 CTD:1973 KO:K03257 OMA:IKMFILD
EMBL:AAEX03006506 EMBL:AAEX03006505 RefSeq:NP_001238871.1
ProteinModelPortal:J9NY67 Ensembl:ENSCAFT00000014379
GeneID:100688577 KEGG:cfa:100688577 Uniprot:J9NY67
Length = 406
Score = 466 (169.1 bits), Expect = 7.7e-70, Sum P(2) = 7.7e-70
Identities = 90/118 (76%), Positives = 102/118 (86%)
Query: 81 QVDWLTEKMREANFTVSSMHGDMPQKERDGIMKEFRSGTSRVLITTDVWARGIDVQQVSL 140
+VDWLTEKM +FTVS+MHGDM QKERD IM+EFRSG+SRVLITTD+ ARGIDVQQVSL
Sbjct: 284 KVDWLTEKMHARDFTVSAMHGDMDQKERDVIMREFRSGSSRVLITTDLLARGIDVQQVSL 343
Query: 141 VINYDLPNNRELYIHRIGRSGRFGRKGVAISFVKSDDIRILRDIEQYYSTQIDEMPMN 198
VINYDLP NRE YIHRIGR GRFGRKGVAI+ V +D R LRDIE +Y+T I+EMP+N
Sbjct: 344 VINYDLPTNRENYIHRIGRGGRFGRKGVAINMVTEEDKRTLRDIETFYNTSIEEMPLN 401
Score = 260 (96.6 bits), Expect = 7.7e-70, Sum P(2) = 7.7e-70
Identities = 50/90 (55%), Positives = 65/90 (72%)
Query: 1 MNVQCHACIGGTNLSEDLRKLDY-GQHVVSGTPGRVFDMIRRRVLRTRNIKMLVLDEADE 59
M CHACIGGTN+ +++KL H++ GTPGRVFDM+ RR L + IKM VLDEADE
Sbjct: 127 MGASCHACIGGTNVRAEVQKLQMEAPHIIVGTPGRVFDMLNRRYLSPKYIKMFVLDEADE 186
Query: 60 MLNKGFKEQIYDVYRYLPPATQVDWLTEKM 89
ML++GFK+QIYD+++ L TQV L+ M
Sbjct: 187 MLSRGFKDQIYDIFQKLNSNTQVVLLSATM 216
>UNIPROTKB|P60842 [details] [associations]
symbol:EIF4A1 "Eukaryotic initiation factor 4A-I"
species:9606 "Homo sapiens" [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0003743 "translation initiation factor
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0019048 "virus-host interaction" evidence=IEA] [GO:0003729
"mRNA binding" evidence=TAS] [GO:0004386 "helicase activity"
evidence=TAS] [GO:0000339 "RNA cap binding" evidence=TAS]
[GO:0008135 "translation factor activity, nucleic acid binding"
evidence=TAS] [GO:0016281 "eukaryotic translation initiation factor
4F complex" evidence=TAS] [GO:0005515 "protein binding"
evidence=IPI] [GO:0000288 "nuclear-transcribed mRNA catabolic
process, deadenylation-dependent decay" evidence=TAS] [GO:0000289
"nuclear-transcribed mRNA poly(A) tail shortening" evidence=TAS]
[GO:0005829 "cytosol" evidence=TAS] [GO:0006412 "translation"
evidence=TAS] [GO:0006413 "translational initiation" evidence=TAS]
[GO:0010467 "gene expression" evidence=TAS] [GO:0016070 "RNA
metabolic process" evidence=TAS] [GO:0016071 "mRNA metabolic
process" evidence=TAS] [GO:0019221 "cytokine-mediated signaling
pathway" evidence=TAS] [GO:0044267 "cellular protein metabolic
process" evidence=TAS] Reactome:REACT_71 Reactome:REACT_21257
Reactome:REACT_17015 InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005829 GO:GO:0005524
Reactome:REACT_6900 EMBL:CH471108 GO:GO:0019048
Pathway_Interaction_DB:mtor_4pathway GO:GO:0006413 GO:GO:0016281
GO:GO:0031100 GO:GO:0003729 GO:GO:0019221 GO:GO:0008135
GO:GO:0004386 GO:GO:0003743 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 GO:GO:0000289 eggNOG:COG0513
HOGENOM:HOG000268797 InterPro:IPR014014 PROSITE:PS51195
HOVERGEN:HBG107989 Reactome:REACT_1762 CTD:1973 KO:K03257
OMA:IKMFILD OrthoDB:EOG4640C1 EMBL:D13748 EMBL:BT019880
EMBL:BT019881 EMBL:AK312630 EMBL:AC016876 EMBL:BC006210
EMBL:BC009585 EMBL:BC073752 IPI:IPI00025491 PIR:S33681
RefSeq:NP_001191439.1 RefSeq:NP_001407.1 UniGene:Hs.129673 PDB:2G9N
PDB:2ZU6 PDB:3EIQ PDBsum:2G9N PDBsum:2ZU6 PDBsum:3EIQ
ProteinModelPortal:P60842 SMR:P60842 DIP:DIP-29755N IntAct:P60842
MINT:MINT-5001111 STRING:P60842 PhosphoSite:P60842 DMDM:46397463
PaxDb:P60842 PRIDE:P60842 DNASU:1973 Ensembl:ENST00000293831
Ensembl:ENST00000577269 GeneID:1973 KEGG:hsa:1973 UCSC:uc002gho.2
GeneCards:GC17P007476 HGNC:HGNC:3282 HPA:CAB011689 MIM:602641
neXtProt:NX_P60842 PharmGKB:PA27710 PhylomeDB:P60842 ChiTaRS:EIF4A1
EvolutionaryTrace:P60842 GenomeRNAi:1973 NextBio:7987
ArrayExpress:P60842 Bgee:P60842 CleanEx:HS_EIF4A1
Genevestigator:P60842 GermOnline:ENSG00000161960 GO:GO:0000339
Uniprot:P60842
Length = 406
Score = 466 (169.1 bits), Expect = 7.7e-70, Sum P(2) = 7.7e-70
Identities = 90/118 (76%), Positives = 102/118 (86%)
Query: 81 QVDWLTEKMREANFTVSSMHGDMPQKERDGIMKEFRSGTSRVLITTDVWARGIDVQQVSL 140
+VDWLTEKM +FTVS+MHGDM QKERD IM+EFRSG+SRVLITTD+ ARGIDVQQVSL
Sbjct: 284 KVDWLTEKMHARDFTVSAMHGDMDQKERDVIMREFRSGSSRVLITTDLLARGIDVQQVSL 343
Query: 141 VINYDLPNNRELYIHRIGRSGRFGRKGVAISFVKSDDIRILRDIEQYYSTQIDEMPMN 198
VINYDLP NRE YIHRIGR GRFGRKGVAI+ V +D R LRDIE +Y+T I+EMP+N
Sbjct: 344 VINYDLPTNRENYIHRIGRGGRFGRKGVAINMVTEEDKRTLRDIETFYNTSIEEMPLN 401
Score = 260 (96.6 bits), Expect = 7.7e-70, Sum P(2) = 7.7e-70
Identities = 50/90 (55%), Positives = 65/90 (72%)
Query: 1 MNVQCHACIGGTNLSEDLRKLDY-GQHVVSGTPGRVFDMIRRRVLRTRNIKMLVLDEADE 59
M CHACIGGTN+ +++KL H++ GTPGRVFDM+ RR L + IKM VLDEADE
Sbjct: 127 MGASCHACIGGTNVRAEVQKLQMEAPHIIVGTPGRVFDMLNRRYLSPKYIKMFVLDEADE 186
Query: 60 MLNKGFKEQIYDVYRYLPPATQVDWLTEKM 89
ML++GFK+QIYD+++ L TQV L+ M
Sbjct: 187 MLSRGFKDQIYDIFQKLNSNTQVVLLSATM 216
>UNIPROTKB|A6M928 [details] [associations]
symbol:EIF4A1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005524 "ATP binding" evidence=IEA] [GO:0003743
"translation initiation factor activity" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003743 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 eggNOG:COG0513 HOGENOM:HOG000268797
InterPro:IPR014014 PROSITE:PS51195 HOVERGEN:HBG107989
GeneTree:ENSGT00530000062880 CTD:1973 KO:K03257 OMA:IKMFILD
OrthoDB:EOG4640C1 EMBL:CU914279 EMBL:DQ351283 RefSeq:NP_001093666.1
UniGene:Ssc.22034 ProteinModelPortal:A6M928 SMR:A6M928 PRIDE:A6M928
Ensembl:ENSSSCT00000019541 GeneID:100101929 KEGG:ssc:100101929
Uniprot:A6M928
Length = 406
Score = 466 (169.1 bits), Expect = 7.7e-70, Sum P(2) = 7.7e-70
Identities = 90/118 (76%), Positives = 102/118 (86%)
Query: 81 QVDWLTEKMREANFTVSSMHGDMPQKERDGIMKEFRSGTSRVLITTDVWARGIDVQQVSL 140
+VDWLTEKM +FTVS+MHGDM QKERD IM+EFRSG+SRVLITTD+ ARGIDVQQVSL
Sbjct: 284 KVDWLTEKMHARDFTVSAMHGDMDQKERDVIMREFRSGSSRVLITTDLLARGIDVQQVSL 343
Query: 141 VINYDLPNNRELYIHRIGRSGRFGRKGVAISFVKSDDIRILRDIEQYYSTQIDEMPMN 198
VINYDLP NRE YIHRIGR GRFGRKGVAI+ V +D R LRDIE +Y+T I+EMP+N
Sbjct: 344 VINYDLPTNRENYIHRIGRGGRFGRKGVAINMVTEEDKRTLRDIETFYNTSIEEMPLN 401
Score = 260 (96.6 bits), Expect = 7.7e-70, Sum P(2) = 7.7e-70
Identities = 50/90 (55%), Positives = 65/90 (72%)
Query: 1 MNVQCHACIGGTNLSEDLRKLDY-GQHVVSGTPGRVFDMIRRRVLRTRNIKMLVLDEADE 59
M CHACIGGTN+ +++KL H++ GTPGRVFDM+ RR L + IKM VLDEADE
Sbjct: 127 MGASCHACIGGTNVRAEVQKLQMEAPHIIVGTPGRVFDMLNRRYLSPKYIKMFVLDEADE 186
Query: 60 MLNKGFKEQIYDVYRYLPPATQVDWLTEKM 89
ML++GFK+QIYD+++ L TQV L+ M
Sbjct: 187 MLSRGFKDQIYDIFQKLNSNTQVVLLSATM 216
>UNIPROTKB|I3LLD5 [details] [associations]
symbol:I3LLD5 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
GeneTree:ENSGT00530000062880 Ensembl:ENSSSCT00000032168 OMA:SKRERIM
Uniprot:I3LLD5
Length = 401
Score = 466 (169.1 bits), Expect = 7.7e-70, Sum P(2) = 7.7e-70
Identities = 90/118 (76%), Positives = 102/118 (86%)
Query: 81 QVDWLTEKMREANFTVSSMHGDMPQKERDGIMKEFRSGTSRVLITTDVWARGIDVQQVSL 140
+VDWLTEKM +FTVS+MHGDM QKERD IM+EFRSG+SRVLITTD+ ARGIDVQQVSL
Sbjct: 279 KVDWLTEKMHARDFTVSAMHGDMDQKERDVIMREFRSGSSRVLITTDLLARGIDVQQVSL 338
Query: 141 VINYDLPNNRELYIHRIGRSGRFGRKGVAISFVKSDDIRILRDIEQYYSTQIDEMPMN 198
VINYDLP NRE YIHRIGR GRFGRKGVAI+ V +D R LRDIE +Y+T I+EMP+N
Sbjct: 339 VINYDLPTNRENYIHRIGRGGRFGRKGVAINMVTEEDKRTLRDIETFYNTSIEEMPLN 396
Score = 260 (96.6 bits), Expect = 7.7e-70, Sum P(2) = 7.7e-70
Identities = 50/90 (55%), Positives = 65/90 (72%)
Query: 1 MNVQCHACIGGTNLSEDLRKLDY-GQHVVSGTPGRVFDMIRRRVLRTRNIKMLVLDEADE 59
M CHACIGGTN+ +++KL H++ GTPGRVFDM+ RR L + IKM VLDEADE
Sbjct: 127 MGASCHACIGGTNVRAEVQKLQMEAPHIIVGTPGRVFDMLNRRYLSPKYIKMFVLDEADE 186
Query: 60 MLNKGFKEQIYDVYRYLPPATQVDWLTEKM 89
ML++GFK+QIYD+++ L TQV L+ M
Sbjct: 187 MLSRGFKDQIYDIFQKLNSNTQVVLLSATM 216
>MGI|MGI:95303 [details] [associations]
symbol:Eif4a1 "eukaryotic translation initiation factor 4A1"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0003723 "RNA binding" evidence=IEA] [GO:0003743 "translation
initiation factor activity" evidence=IEA] [GO:0004386 "helicase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0006412 "translation" evidence=IEA] [GO:0006413 "translational
initiation" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0016787 "hydrolase activity"
evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 MGI:MGI:95303 GO:GO:0005524
GO:GO:0003743 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 eggNOG:COG0513 HOGENOM:HOG000268797
InterPro:IPR014014 PROSITE:PS51195 HOVERGEN:HBG107989 CTD:1973
KO:K03257 OMA:IKMFILD OrthoDB:EOG4640C1 EMBL:X03039 EMBL:X03040
EMBL:L36611 EMBL:M22873 EMBL:L36608 EMBL:L36609 EMBL:L36610
EMBL:AB011595 EMBL:AK077429 EMBL:BC049915 IPI:IPI00118676
PIR:JS0039 RefSeq:NP_659207.1 UniGene:Mm.279821 UniGene:Mm.371557
UniGene:Mm.473799 ProteinModelPortal:P60843 SMR:P60843
MINT:MINT-202155 STRING:P60843 PhosphoSite:P60843
REPRODUCTION-2DPAGE:P60843 PaxDb:P60843 PRIDE:P60843
Ensembl:ENSMUST00000163666 GeneID:13681 KEGG:mmu:13681
InParanoid:P60843 NextBio:284438 Bgee:P60843 CleanEx:MM_EIF4A1
Genevestigator:P60843 GermOnline:ENSMUSG00000064241 Uniprot:P60843
Length = 406
Score = 466 (169.1 bits), Expect = 7.7e-70, Sum P(2) = 7.7e-70
Identities = 90/118 (76%), Positives = 102/118 (86%)
Query: 81 QVDWLTEKMREANFTVSSMHGDMPQKERDGIMKEFRSGTSRVLITTDVWARGIDVQQVSL 140
+VDWLTEKM +FTVS+MHGDM QKERD IM+EFRSG+SRVLITTD+ ARGIDVQQVSL
Sbjct: 284 KVDWLTEKMHARDFTVSAMHGDMDQKERDVIMREFRSGSSRVLITTDLLARGIDVQQVSL 343
Query: 141 VINYDLPNNRELYIHRIGRSGRFGRKGVAISFVKSDDIRILRDIEQYYSTQIDEMPMN 198
VINYDLP NRE YIHRIGR GRFGRKGVAI+ V +D R LRDIE +Y+T I+EMP+N
Sbjct: 344 VINYDLPTNRENYIHRIGRGGRFGRKGVAINMVTEEDKRTLRDIETFYNTSIEEMPLN 401
Score = 260 (96.6 bits), Expect = 7.7e-70, Sum P(2) = 7.7e-70
Identities = 50/90 (55%), Positives = 65/90 (72%)
Query: 1 MNVQCHACIGGTNLSEDLRKLDY-GQHVVSGTPGRVFDMIRRRVLRTRNIKMLVLDEADE 59
M CHACIGGTN+ +++KL H++ GTPGRVFDM+ RR L + IKM VLDEADE
Sbjct: 127 MGASCHACIGGTNVRAEVQKLQMEAPHIIVGTPGRVFDMLNRRYLSPKYIKMFVLDEADE 186
Query: 60 MLNKGFKEQIYDVYRYLPPATQVDWLTEKM 89
ML++GFK+QIYD+++ L TQV L+ M
Sbjct: 187 MLSRGFKDQIYDIFQKLNSNTQVVLLSATM 216
>UNIPROTKB|Q6P3V8 [details] [associations]
symbol:Eif4a1 "Protein Eif4a1" species:10116 "Rattus
norvegicus" [GO:0003743 "translation initiation factor activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 RGD:735141
GO:GO:0005524 GO:GO:0003743 EMBL:CH473948 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 HOGENOM:HOG000268797
InterPro:IPR014014 PROSITE:PS51195 HOVERGEN:HBG107989
GeneTree:ENSGT00530000062880 CTD:1973 KO:K03257 OMA:IKMFILD
OrthoDB:EOG4640C1 EMBL:BC063812 IPI:IPI00369618 RefSeq:NP_955404.1
UniGene:Rn.91523 SMR:Q6P3V8 STRING:Q6P3V8
Ensembl:ENSRNOT00000049048 GeneID:287436 KEGG:rno:287436
InParanoid:Q6P3V8 NextBio:626135 Genevestigator:Q6P3V8
Uniprot:Q6P3V8
Length = 406
Score = 466 (169.1 bits), Expect = 7.7e-70, Sum P(2) = 7.7e-70
Identities = 90/118 (76%), Positives = 102/118 (86%)
Query: 81 QVDWLTEKMREANFTVSSMHGDMPQKERDGIMKEFRSGTSRVLITTDVWARGIDVQQVSL 140
+VDWLTEKM +FTVS+MHGDM QKERD IM+EFRSG+SRVLITTD+ ARGIDVQQVSL
Sbjct: 284 KVDWLTEKMHARDFTVSAMHGDMDQKERDVIMREFRSGSSRVLITTDLLARGIDVQQVSL 343
Query: 141 VINYDLPNNRELYIHRIGRSGRFGRKGVAISFVKSDDIRILRDIEQYYSTQIDEMPMN 198
VINYDLP NRE YIHRIGR GRFGRKGVAI+ V +D R LRDIE +Y+T I+EMP+N
Sbjct: 344 VINYDLPTNRENYIHRIGRGGRFGRKGVAINMVTEEDKRTLRDIETFYNTSIEEMPLN 401
Score = 260 (96.6 bits), Expect = 7.7e-70, Sum P(2) = 7.7e-70
Identities = 50/90 (55%), Positives = 65/90 (72%)
Query: 1 MNVQCHACIGGTNLSEDLRKLDY-GQHVVSGTPGRVFDMIRRRVLRTRNIKMLVLDEADE 59
M CHACIGGTN+ +++KL H++ GTPGRVFDM+ RR L + IKM VLDEADE
Sbjct: 127 MGASCHACIGGTNVRAEVQKLQMEAPHIIVGTPGRVFDMLNRRYLSPKYIKMFVLDEADE 186
Query: 60 MLNKGFKEQIYDVYRYLPPATQVDWLTEKM 89
ML++GFK+QIYD+++ L TQV L+ M
Sbjct: 187 MLSRGFKDQIYDIFQKLNSNTQVVLLSATM 216
>ZFIN|ZDB-GENE-040120-6 [details] [associations]
symbol:eif4a1b "eukaryotic translation initiation
factor 4A, isoform 1B" species:7955 "Danio rerio" [GO:0003676
"nucleic acid binding" evidence=IEA] [GO:0004386 "helicase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0003743 "translation initiation factor activity" evidence=IEA]
[GO:0006413 "translational initiation" evidence=IEA] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 ZFIN:ZDB-GENE-040120-6 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 HOGENOM:HOG000268797 InterPro:IPR014014
PROSITE:PS51195 HOVERGEN:HBG107989 OrthoDB:EOG4640C1 EMBL:BC153507
IPI:IPI00509685 UniGene:Dr.104803 ProteinModelPortal:A8E590
SMR:A8E590 STRING:A8E590 ArrayExpress:A8E590 Uniprot:A8E590
Length = 429
Score = 464 (168.4 bits), Expect = 1.4e-68, Sum P(2) = 1.4e-68
Identities = 89/118 (75%), Positives = 102/118 (86%)
Query: 81 QVDWLTEKMREANFTVSSMHGDMPQKERDGIMKEFRSGTSRVLITTDVWARGIDVQQVSL 140
+VDWLTEKM +FTVS++HGDM QK+RD IM+EFRSG+SRVLITTD+ ARGIDVQQVSL
Sbjct: 307 KVDWLTEKMHARDFTVSALHGDMDQKDRDLIMREFRSGSSRVLITTDLLARGIDVQQVSL 366
Query: 141 VINYDLPNNRELYIHRIGRSGRFGRKGVAISFVKSDDIRILRDIEQYYSTQIDEMPMN 198
VINYDLP NRE YIHRIGR GRFGRKGVAI+ V DD R LRDIE +Y+T ++EMPMN
Sbjct: 367 VINYDLPTNRENYIHRIGRGGRFGRKGVAINMVTEDDKRTLRDIETFYNTTVEEMPMN 424
Score = 250 (93.1 bits), Expect = 1.4e-68, Sum P(2) = 1.4e-68
Identities = 47/90 (52%), Positives = 66/90 (73%)
Query: 1 MNVQCHACIGGTNLSEDLRKLDY-GQHVVSGTPGRVFDMIRRRVLRTRNIKMLVLDEADE 59
M CHACIGGTN+ +++KL H+V GTPGRV+DM+ R+ L ++ IKM VLDEADE
Sbjct: 150 MGATCHACIGGTNVRNEVQKLQAEAPHIVVGTPGRVYDMLNRKFLSSKYIKMFVLDEADE 209
Query: 60 MLNKGFKEQIYDVYRYLPPATQVDWLTEKM 89
ML++GFK+QIY++++ L + QV L+ M
Sbjct: 210 MLSRGFKDQIYEIFQKLSTSIQVVLLSATM 239
>WB|WBGene00002083 [details] [associations]
symbol:inf-1 species:6239 "Caenorhabditis elegans"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0009792 "embryo development ending in birth or
egg hatching" evidence=IMP] [GO:0000003 "reproduction"
evidence=IMP] [GO:0040007 "growth" evidence=IMP] [GO:0002119
"nematode larval development" evidence=IMP] [GO:0040011
"locomotion" evidence=IMP] [GO:0008340 "determination of adult
lifespan" evidence=IMP] [GO:0019915 "lipid storage" evidence=IMP]
[GO:0040010 "positive regulation of growth rate" evidence=IMP]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0008340 GO:GO:0009792
GO:GO:0040007 GO:GO:0040010 GO:GO:0002119 GO:GO:0040011
GO:GO:0000003 GO:GO:0019915 GO:GO:0003743 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 EMBL:FO081266 GO:GO:0008026
eggNOG:COG0513 HOGENOM:HOG000268797 InterPro:IPR014014
PROSITE:PS51195 GeneTree:ENSGT00530000062880 KO:K03257 OMA:TENDARQ
EMBL:Z12116 PIR:S26281 RefSeq:NP_001022623.1 RefSeq:NP_001022624.1
UniGene:Cel.6803 ProteinModelPortal:P27639 SMR:P27639
DIP:DIP-27102N IntAct:P27639 MINT:MINT-1112147 STRING:P27639
PaxDb:P27639 PRIDE:P27639 EnsemblMetazoa:F57B9.6a.1
EnsemblMetazoa:F57B9.6a.2 GeneID:175966 KEGG:cel:CELE_F57B9.6
UCSC:F57B9.6a.1 CTD:175966 WormBase:F57B9.6a WormBase:F57B9.6b
InParanoid:P27639 NextBio:890522 Uniprot:P27639
Length = 402
Score = 453 (164.5 bits), Expect = 4.7e-68, Sum P(2) = 4.7e-68
Identities = 89/116 (76%), Positives = 101/116 (87%)
Query: 81 QVDWLTEKMREANFTVSSMHGDMPQKERDGIMKEFRSGTSRVLITTDVWARGIDVQQVSL 140
+VD LTEKM E FTVS +HGDM Q ERD IM+EFRSG+SRVLITTD+ ARGIDVQQVSL
Sbjct: 280 KVDTLTEKMTENQFTVSCLHGDMDQAERDTIMREFRSGSSRVLITTDILARGIDVQQVSL 339
Query: 141 VINYDLPNNRELYIHRIGRSGRFGRKGVAISFVKSDDIRILRDIEQYYSTQIDEMP 196
VINYDLP+NRE YIHRIGRSGRFGRKGVAI+FV +D R L++IE YY+TQI+EMP
Sbjct: 340 VINYDLPSNRENYIHRIGRSGRFGRKGVAINFVTENDARQLKEIESYYTTQIEEMP 395
Score = 256 (95.2 bits), Expect = 4.7e-68, Sum P(2) = 4.7e-68
Identities = 52/89 (58%), Positives = 64/89 (71%)
Query: 1 MNVQCHACIGGTNLSEDLRKLDYGQHVVSGTPGRVFDMIRRRVLRTRNIKMLVLDEADEM 60
+NV CIGGT++ +D RKL+ G HVV GTPGRV DMI R L T IKM VLDEADEM
Sbjct: 124 LNVNILPCIGGTSVRDDQRKLEAGIHVVVGTPGRVGDMINRNALDTSRIKMFVLDEADEM 183
Query: 61 LNKGFKEQIYDVYRYLPPATQVDWLTEKM 89
L++GFK+QIY+V+R +P QV L+ M
Sbjct: 184 LSRGFKDQIYEVFRSMPQDVQVVLLSATM 212
>TAIR|locus:2020078 [details] [associations]
symbol:EIF4A-2 "eif4a-2" species:3702 "Arabidopsis
thaliana" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0003743 "translation initiation factor activity" evidence=ISS]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005737 "cytoplasm" evidence=ISM]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA;ISS]
[GO:0046686 "response to cadmium ion" evidence=IEP;RCA] [GO:0005774
"vacuolar membrane" evidence=IDA] [GO:0005886 "plasma membrane"
evidence=IDA] [GO:0005829 "cytosol" evidence=IDA] [GO:0009506
"plasmodesma" evidence=IDA] [GO:0005794 "Golgi apparatus"
evidence=RCA] [GO:0006094 "gluconeogenesis" evidence=RCA]
[GO:0006096 "glycolysis" evidence=RCA] [GO:0009651 "response to
salt stress" evidence=RCA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005829 GO:GO:0005886 GO:GO:0009506
GO:GO:0005524 GO:GO:0005774 GO:GO:0046686 EMBL:AC005287
GO:GO:0003743 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 eggNOG:COG0513 HOGENOM:HOG000268797
InterPro:IPR014014 PROSITE:PS51195 KO:K03257 EMBL:X65053
EMBL:AF386923 EMBL:AF428462 EMBL:BT008504 EMBL:AK226344
EMBL:AY087965 IPI:IPI00522023 PIR:JC1453 RefSeq:NP_175829.1
UniGene:At.195 ProteinModelPortal:P41377 SMR:P41377 STRING:P41377
PaxDb:P41377 PRIDE:P41377 ProMEX:P41377 EnsemblPlants:AT1G54270.1
GeneID:841868 KEGG:ath:AT1G54270 GeneFarm:936 TAIR:At1g54270
InParanoid:P41377 OMA:QVVWEEN PhylomeDB:P41377
ProtClustDB:CLSN2679594 Genevestigator:P41377 GermOnline:AT1G54270
Uniprot:P41377
Length = 412
Score = 416 (151.5 bits), Expect = 6.1e-66, Sum P(2) = 6.1e-66
Identities = 80/118 (67%), Positives = 98/118 (83%)
Query: 81 QVDWLTEKMREANFTVSSMHGDMPQKERDGIMKEFRSGTSRVLITTDVWARGIDVQQVSL 140
+VDWLT+KMR + TVS+ HGDM Q RD IM+EFRSG+SRVLITTD+ ARGIDVQQVSL
Sbjct: 290 KVDWLTDKMRSRDHTVSATHGDMDQNTRDIIMREFRSGSSRVLITTDLLARGIDVQQVSL 349
Query: 141 VINYDLPNNRELYIHRIGRSGRFGRKGVAISFVKSDDIRILRDIEQYYSTQIDEMPMN 198
VIN+DLP E Y+HRIGRSGRFGRKGVAI+FV DD R+L DI+++Y+ ++E+P N
Sbjct: 350 VINFDLPTQPENYLHRIGRSGRFGRKGVAINFVTLDDQRMLFDIQKFYNVVVEELPSN 407
Score = 273 (101.2 bits), Expect = 6.1e-66, Sum P(2) = 6.1e-66
Identities = 52/80 (65%), Positives = 64/80 (80%)
Query: 3 VQCHACIGGTNLSEDLRKLDYGQHVVSGTPGRVFDMIRRRVLRTRNIKMLVLDEADEMLN 62
V+ HAC+GGT++ ED R L G HVV GTPGRVFDM+RR+ LR IKM VLDEADEML+
Sbjct: 136 VKVHACVGGTSVREDQRILQAGVHVVVGTPGRVFDMLRRQSLRPDCIKMFVLDEADEMLS 195
Query: 63 KGFKEQIYDVYRYLPPATQV 82
+GFK+QIYD+++ LPP QV
Sbjct: 196 RGFKDQIYDIFQLLPPKIQV 215
>TAIR|locus:2030285 [details] [associations]
symbol:AT1G72730 species:3702 "Arabidopsis thaliana"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=ISM] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA;ISS] [GO:0009505
"plant-type cell wall" evidence=IDA] [GO:0005774 "vacuolar
membrane" evidence=IDA] [GO:0005829 "cytosol" evidence=IDA]
[GO:0005794 "Golgi apparatus" evidence=RCA] [GO:0009744 "response
to sucrose stimulus" evidence=RCA] [GO:0009749 "response to glucose
stimulus" evidence=RCA] [GO:0009750 "response to fructose stimulus"
evidence=RCA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005829 GO:GO:0005524 GO:GO:0005774
GO:GO:0009505 GO:GO:0003743 EMBL:AC010926 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513
HOGENOM:HOG000268797 InterPro:IPR014014 PROSITE:PS51195 KO:K03257
ProtClustDB:CLSN2679594 EMBL:AJ010472 EMBL:AY060592 EMBL:AY142066
EMBL:AY088176 IPI:IPI00526542 PIR:B96752 PIR:T51347
RefSeq:NP_177417.1 UniGene:At.22983 ProteinModelPortal:Q9CAI7
SMR:Q9CAI7 IntAct:Q9CAI7 STRING:Q9CAI7 PaxDb:Q9CAI7 PRIDE:Q9CAI7
EnsemblPlants:AT1G72730.1 GeneID:843605 KEGG:ath:AT1G72730
GeneFarm:940 TAIR:At1g72730 InParanoid:Q9CAI7 OMA:AVINYHI
PhylomeDB:Q9CAI7 Genevestigator:Q9CAI7 GermOnline:AT1G72730
Uniprot:Q9CAI7
Length = 414
Score = 415 (151.1 bits), Expect = 1.4e-64, Sum P(2) = 1.4e-64
Identities = 78/118 (66%), Positives = 99/118 (83%)
Query: 81 QVDWLTEKMREANFTVSSMHGDMPQKERDGIMKEFRSGTSRVLITTDVWARGIDVQQVSL 140
+VDWLT+KMR + TVS+ HGDM Q RD IM+EFRSG+SRVLITTD+ ARGIDVQQVSL
Sbjct: 292 KVDWLTDKMRSRDHTVSATHGDMDQNTRDIIMREFRSGSSRVLITTDLLARGIDVQQVSL 351
Query: 141 VINYDLPNNRELYIHRIGRSGRFGRKGVAISFVKSDDIRILRDIEQYYSTQIDEMPMN 198
VIN+DLP E Y+HRIGRSGRFGRKGVAI+F+ S+D R++ DI+++Y+ ++E+P N
Sbjct: 352 VINFDLPTQPENYLHRIGRSGRFGRKGVAINFMTSEDERMMADIQRFYNVVVEELPSN 409
Score = 261 (96.9 bits), Expect = 1.4e-64, Sum P(2) = 1.4e-64
Identities = 49/82 (59%), Positives = 63/82 (76%)
Query: 1 MNVQCHACIGGTNLSEDLRKLDYGQHVVSGTPGRVFDMIRRRVLRTRNIKMLVLDEADEM 60
+ V+ AC+GGT++ ED R L G HVV GTPGRVFD++RR+ LR IKM VLDEADEM
Sbjct: 136 LGVKAQACVGGTSVREDQRVLQSGVHVVVGTPGRVFDLLRRQSLRADAIKMFVLDEADEM 195
Query: 61 LNKGFKEQIYDVYRYLPPATQV 82
L++GFK+QIYD+++ LP QV
Sbjct: 196 LSRGFKDQIYDIFQLLPSKVQV 217
>SGD|S000001767 [details] [associations]
symbol:TIF1 "Translation initiation factor eIF4A"
species:4932 "Saccharomyces cerevisiae" [GO:0003743 "translation
initiation factor activity" evidence=IEA;IMP;IDA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0003723 "RNA binding"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0006413 "translational
initiation" evidence=IEA;IMP;IDA] [GO:0006412 "translation"
evidence=IEA] [GO:0004004 "ATP-dependent RNA helicase activity"
evidence=IMP;IDA] [GO:0005840 "ribosome" evidence=TAS] [GO:0016281
"eukaryotic translation initiation factor 4F complex"
evidence=IGI;ISS] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 SGD:S000001767
SGD:S000003674 GO:GO:0005524 GO:GO:0005737 EMBL:BK006943
EMBL:BK006944 GO:GO:0003743 EMBL:X87371 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 KO:K03854
eggNOG:COG0513 HOGENOM:HOG000268797 InterPro:IPR014014
PROSITE:PS51195 GeneTree:ENSGT00530000062880 EMBL:U25436 KO:K03257
OMA:IKMFILD OrthoDB:EOG4PG98F EMBL:X12813 EMBL:X12814 EMBL:X58099
EMBL:Z49413 EMBL:Z28284 PIR:S05835 RefSeq:NP_012397.1
RefSeq:NP_012985.3 RefSeq:NP_012987.3 PDB:1FUK PDB:1FUU PDB:1QDE
PDB:1QVA PDB:2VSO PDB:2VSX PDBsum:1FUK PDBsum:1FUU PDBsum:1QDE
PDBsum:1QVA PDBsum:2VSO PDBsum:2VSX ProteinModelPortal:P10081
SMR:P10081 DIP:DIP-4571N IntAct:P10081 MINT:MINT-546056
STRING:P10081 SWISS-2DPAGE:P10081 PaxDb:P10081 EnsemblFungi:YJL138C
EnsemblFungi:YKR059W GeneID:853303 GeneID:853933 GeneID:853935
KEGG:sce:YJL138C KEGG:sce:YKR059W KEGG:sce:YKR061W SABIO-RK:P10081
EvolutionaryTrace:P10081 NextBio:973627 Genevestigator:P10081
GermOnline:YJL138C GermOnline:YKR059W Uniprot:P10081
Length = 395
Score = 419 (152.6 bits), Expect = 2.3e-64, Sum P(2) = 2.3e-64
Identities = 78/116 (67%), Positives = 102/116 (87%)
Query: 81 QVDWLTEKMREANFTVSSMHGDMPQKERDGIMKEFRSGTSRVLITTDVWARGIDVQQVSL 140
+V+ LT K+R FTVS+++ D+PQ+ERD IMKEFRSG+SR+LI+TD+ ARGIDVQQVSL
Sbjct: 272 KVEELTTKLRNDKFTVSAIYSDLPQQERDTIMKEFRSGSSRILISTDLLARGIDVQQVSL 331
Query: 141 VINYDLPNNRELYIHRIGRSGRFGRKGVAISFVKSDDIRILRDIEQYYSTQIDEMP 196
VINYDLP N+E YIHRIGR GRFGRKGVAI+FV ++D+ +R++E++YSTQI+E+P
Sbjct: 332 VINYDLPANKENYIHRIGRGGRFGRKGVAINFVTNEDVGAMRELEKFYSTQIEELP 387
Score = 255 (94.8 bits), Expect = 2.3e-64, Sum P(2) = 2.3e-64
Identities = 53/89 (59%), Positives = 63/89 (70%)
Query: 1 MNVQCHACIGGTNLSEDLRKLDYGQHVVSGTPGRVFDMIRRRVLRTRNIKMLVLDEADEM 60
M+++ HACIGGT+ ED L Q VV GTPGRVFD I+RR RT IKM +LDEADEM
Sbjct: 117 MDIKVHACIGGTSFVEDAEGLRDAQIVV-GTPGRVFDNIQRRRFRTDKIKMFILDEADEM 175
Query: 61 LNKGFKEQIYDVYRYLPPATQVDWLTEKM 89
L+ GFKEQIY ++ LPP TQV L+ M
Sbjct: 176 LSSGFKEQIYQIFTLLPPTTQVVLLSATM 204
>SGD|S000003674 [details] [associations]
symbol:TIF2 "Translation initiation factor eIF4A"
species:4932 "Saccharomyces cerevisiae" [GO:0003743 "translation
initiation factor activity" evidence=IEA;ISS;IDA;TAS] [GO:0005886
"plasma membrane" evidence=IDA] [GO:0005737 "cytoplasm"
evidence=IEA;ISS;IDA] [GO:0006446 "regulation of translational
initiation" evidence=ISS] [GO:0005840 "ribosome" evidence=TAS]
[GO:0016281 "eukaryotic translation initiation factor 4F complex"
evidence=IGI;ISS] [GO:0004004 "ATP-dependent RNA helicase activity"
evidence=IMP] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0006412 "translation"
evidence=IEA] [GO:0006413 "translational initiation"
evidence=IEA;TAS] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 SGD:S000001767 SGD:S000003674 GO:GO:0005524
GO:GO:0005737 EMBL:BK006943 EMBL:BK006944 GO:GO:0003743 EMBL:X87371
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
KO:K03854 eggNOG:COG0513 HOGENOM:HOG000268797 InterPro:IPR014014
PROSITE:PS51195 GeneTree:ENSGT00530000062880 EMBL:U25436 KO:K03257
OMA:IKMFILD OrthoDB:EOG4PG98F EMBL:X12813 EMBL:X12814 EMBL:X58099
EMBL:Z49413 EMBL:Z28284 PIR:S05835 RefSeq:NP_012397.1
RefSeq:NP_012985.3 RefSeq:NP_012987.3 PDB:1FUK PDB:1FUU PDB:1QDE
PDB:1QVA PDB:2VSO PDB:2VSX PDBsum:1FUK PDBsum:1FUU PDBsum:1QDE
PDBsum:1QVA PDBsum:2VSO PDBsum:2VSX ProteinModelPortal:P10081
SMR:P10081 DIP:DIP-4571N IntAct:P10081 MINT:MINT-546056
STRING:P10081 SWISS-2DPAGE:P10081 PaxDb:P10081 EnsemblFungi:YJL138C
EnsemblFungi:YKR059W GeneID:853303 GeneID:853933 GeneID:853935
KEGG:sce:YJL138C KEGG:sce:YKR059W KEGG:sce:YKR061W SABIO-RK:P10081
EvolutionaryTrace:P10081 NextBio:973627 Genevestigator:P10081
GermOnline:YJL138C GermOnline:YKR059W Uniprot:P10081
Length = 395
Score = 419 (152.6 bits), Expect = 2.3e-64, Sum P(2) = 2.3e-64
Identities = 78/116 (67%), Positives = 102/116 (87%)
Query: 81 QVDWLTEKMREANFTVSSMHGDMPQKERDGIMKEFRSGTSRVLITTDVWARGIDVQQVSL 140
+V+ LT K+R FTVS+++ D+PQ+ERD IMKEFRSG+SR+LI+TD+ ARGIDVQQVSL
Sbjct: 272 KVEELTTKLRNDKFTVSAIYSDLPQQERDTIMKEFRSGSSRILISTDLLARGIDVQQVSL 331
Query: 141 VINYDLPNNRELYIHRIGRSGRFGRKGVAISFVKSDDIRILRDIEQYYSTQIDEMP 196
VINYDLP N+E YIHRIGR GRFGRKGVAI+FV ++D+ +R++E++YSTQI+E+P
Sbjct: 332 VINYDLPANKENYIHRIGRGGRFGRKGVAINFVTNEDVGAMRELEKFYSTQIEELP 387
Score = 255 (94.8 bits), Expect = 2.3e-64, Sum P(2) = 2.3e-64
Identities = 53/89 (59%), Positives = 63/89 (70%)
Query: 1 MNVQCHACIGGTNLSEDLRKLDYGQHVVSGTPGRVFDMIRRRVLRTRNIKMLVLDEADEM 60
M+++ HACIGGT+ ED L Q VV GTPGRVFD I+RR RT IKM +LDEADEM
Sbjct: 117 MDIKVHACIGGTSFVEDAEGLRDAQIVV-GTPGRVFDNIQRRRFRTDKIKMFILDEADEM 175
Query: 61 LNKGFKEQIYDVYRYLPPATQVDWLTEKM 89
L+ GFKEQIY ++ LPP TQV L+ M
Sbjct: 176 LSSGFKEQIYQIFTLLPPTTQVVLLSATM 204
>GENEDB_PFALCIPARUM|PF14_0655 [details] [associations]
symbol:PF14_0655 "RNA helicase-1, putative"
species:5833 "Plasmodium falciparum" [GO:0003729 "mRNA binding"
evidence=ISS] [GO:0003743 "translation initiation factor activity"
evidence=ISS] [GO:0000339 "RNA cap binding" evidence=ISS]
[GO:0006446 "regulation of translational initiation" evidence=ISS]
[GO:0016281 "eukaryotic translation initiation factor 4F complex"
evidence=ISS] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0006446
GO:GO:0003676 EMBL:AE014187 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 HOGENOM:HOG000268797
InterPro:IPR014014 PROSITE:PS51195 HSSP:P10081
GenomeReviews:AE014187_GR KO:K03257 OMA:TENDARQ
RefSeq:XP_001348829.1 ProteinModelPortal:Q8IKF0 SMR:Q8IKF0
IntAct:Q8IKF0 MINT:MINT-1575859 EnsemblProtists:PF14_0655:mRNA
GeneID:812237 KEGG:pfa:PF14_0655 EuPathDB:PlasmoDB:PF3D7_1468700
ProtClustDB:PTZ00424 Uniprot:Q8IKF0
Length = 398
Score = 412 (150.1 bits), Expect = 4.2e-63, Sum P(2) = 4.2e-63
Identities = 84/125 (67%), Positives = 100/125 (80%)
Query: 75 YLPPATQVDWLTEKMREANFTVSSMHGDMPQKERDGIMKEFRSGTSRVLITTDVWARGID 134
Y +VD LT++M FTVS MHGDM QK+RD IM+EFRSG++RVL+TTD+ ARGID
Sbjct: 268 YCNTRKKVDILTQEMHNRLFTVSCMHGDMDQKDRDLIMREFRSGSTRVLVTTDLLARGID 327
Query: 135 VQQVSLVINYDLPNNRELYIHRIGRSGRFGRKGVAISFVKSDDIRI--LRDIEQYYSTQI 192
VQQVSLVINYDLP + + YIHRIGRSGRFGRKGVAI+FV +DD L+ IE YYSTQI
Sbjct: 328 VQQVSLVINYDLPASPDTYIHRIGRSGRFGRKGVAINFVTNDDKEKDKLKKIESYYSTQI 387
Query: 193 DEMPM 197
+EMP+
Sbjct: 388 EEMPL 392
Score = 250 (93.1 bits), Expect = 4.2e-63, Sum P(2) = 4.2e-63
Identities = 46/82 (56%), Positives = 62/82 (75%)
Query: 1 MNVQCHACIGGTNLSEDLRKLDYGQHVVSGTPGRVFDMIRRRVLRTRNIKMLVLDEADEM 60
+ V+CHAC+GGT + ED+ KL G H+V GTPGRV+DMI +R L +K+ +LDEADEM
Sbjct: 118 LKVKCHACVGGTVVREDIDKLKQGVHMVVGTPGRVYDMIDKRHLGVDRLKLFILDEADEM 177
Query: 61 LNKGFKEQIYDVYRYLPPATQV 82
L++GFK QIY+V++ L P QV
Sbjct: 178 LSRGFKAQIYEVFKKLVPDIQV 199
>UNIPROTKB|Q8IKF0 [details] [associations]
symbol:H45 "Helicase 45" species:36329 "Plasmodium
falciparum 3D7" [GO:0006446 "regulation of translational
initiation" evidence=ISS] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0006446
GO:GO:0003676 EMBL:AE014187 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 HOGENOM:HOG000268797
InterPro:IPR014014 PROSITE:PS51195 HSSP:P10081
GenomeReviews:AE014187_GR KO:K03257 OMA:TENDARQ
RefSeq:XP_001348829.1 ProteinModelPortal:Q8IKF0 SMR:Q8IKF0
IntAct:Q8IKF0 MINT:MINT-1575859 EnsemblProtists:PF14_0655:mRNA
GeneID:812237 KEGG:pfa:PF14_0655 EuPathDB:PlasmoDB:PF3D7_1468700
ProtClustDB:PTZ00424 Uniprot:Q8IKF0
Length = 398
Score = 412 (150.1 bits), Expect = 4.2e-63, Sum P(2) = 4.2e-63
Identities = 84/125 (67%), Positives = 100/125 (80%)
Query: 75 YLPPATQVDWLTEKMREANFTVSSMHGDMPQKERDGIMKEFRSGTSRVLITTDVWARGID 134
Y +VD LT++M FTVS MHGDM QK+RD IM+EFRSG++RVL+TTD+ ARGID
Sbjct: 268 YCNTRKKVDILTQEMHNRLFTVSCMHGDMDQKDRDLIMREFRSGSTRVLVTTDLLARGID 327
Query: 135 VQQVSLVINYDLPNNRELYIHRIGRSGRFGRKGVAISFVKSDDIRI--LRDIEQYYSTQI 192
VQQVSLVINYDLP + + YIHRIGRSGRFGRKGVAI+FV +DD L+ IE YYSTQI
Sbjct: 328 VQQVSLVINYDLPASPDTYIHRIGRSGRFGRKGVAINFVTNDDKEKDKLKKIESYYSTQI 387
Query: 193 DEMPM 197
+EMP+
Sbjct: 388 EEMPL 392
Score = 250 (93.1 bits), Expect = 4.2e-63, Sum P(2) = 4.2e-63
Identities = 46/82 (56%), Positives = 62/82 (75%)
Query: 1 MNVQCHACIGGTNLSEDLRKLDYGQHVVSGTPGRVFDMIRRRVLRTRNIKMLVLDEADEM 60
+ V+CHAC+GGT + ED+ KL G H+V GTPGRV+DMI +R L +K+ +LDEADEM
Sbjct: 118 LKVKCHACVGGTVVREDIDKLKQGVHMVVGTPGRVYDMIDKRHLGVDRLKLFILDEADEM 177
Query: 61 LNKGFKEQIYDVYRYLPPATQV 82
L++GFK QIY+V++ L P QV
Sbjct: 178 LSRGFKAQIYEVFKKLVPDIQV 199
>TAIR|locus:2088237 [details] [associations]
symbol:EIF4A1 "eukaryotic translation initiation factor
4A1" species:3702 "Arabidopsis thaliana" [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0003743 "translation initiation factor
activity" evidence=ISS] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=ISM] [GO:0005737 "cytoplasm" evidence=ISM]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA;ISS]
[GO:0006413 "translational initiation" evidence=ISS] [GO:0005515
"protein binding" evidence=IPI] [GO:0005730 "nucleolus"
evidence=IDA] [GO:0005618 "cell wall" evidence=IDA] [GO:0046686
"response to cadmium ion" evidence=IEP;RCA] [GO:0016020 "membrane"
evidence=IDA] [GO:0005829 "cytosol" evidence=IDA] [GO:0009506
"plasmodesma" evidence=IDA] [GO:0048046 "apoplast" evidence=IDA]
[GO:0005794 "Golgi apparatus" evidence=RCA] [GO:0006094
"gluconeogenesis" evidence=RCA] [GO:0006096 "glycolysis"
evidence=RCA] [GO:0009651 "response to salt stress" evidence=RCA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005829 GO:GO:0009506 GO:GO:0005524
GO:GO:0005618 GO:GO:0046686 EMBL:CP002686 GO:GO:0005730
GO:GO:0016020 GO:GO:0048046 GO:GO:0006413 GO:GO:0003743
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 KO:K03257 OMA:SKRERIM
IPI:IPI00657454 RefSeq:NP_001030693.1 UniGene:At.23558
UniGene:At.28184 ProteinModelPortal:F4JEL4 SMR:F4JEL4 PRIDE:F4JEL4
EnsemblPlants:AT3G13920.2 GeneID:820605 KEGG:ath:AT3G13920
Uniprot:F4JEL4
Length = 415
Score = 374 (136.7 bits), Expect = 1.8e-62, Sum P(2) = 1.8e-62
Identities = 74/101 (73%), Positives = 85/101 (84%)
Query: 81 QVDWLTEKMREANFTVSSMHGDMPQKERDGIMKEFRSGTSRVLITTDVWARGIDVQQVSL 140
+VDWLT+KMR + TVS+ HGDM Q RD IM+EFRSG+SRVLITTD+ ARGIDVQQVSL
Sbjct: 290 KVDWLTDKMRSRDHTVSATHGDMDQNTRDIIMREFRSGSSRVLITTDLLARGIDVQQVSL 349
Query: 141 VINYDLPNNRELYIHRIGRSGRFGRKGVAISFVKSDDIRIL 181
VIN+DLP E Y+HRIGRSGRFGRKGVAI+FV DD R+L
Sbjct: 350 VINFDLPTQPENYLHRIGRSGRFGRKGVAINFVTRDDERML 390
Score = 282 (104.3 bits), Expect = 1.8e-62, Sum P(2) = 1.8e-62
Identities = 52/82 (63%), Positives = 66/82 (80%)
Query: 1 MNVQCHACIGGTNLSEDLRKLDYGQHVVSGTPGRVFDMIRRRVLRTRNIKMLVLDEADEM 60
+ V+ HAC+GGT++ ED R L G HVV GTPGRVFDM++R+ LR NIKM VLDEADEM
Sbjct: 134 LGVKVHACVGGTSVREDQRILQAGVHVVVGTPGRVFDMLKRQSLRADNIKMFVLDEADEM 193
Query: 61 LNKGFKEQIYDVYRYLPPATQV 82
L++GFK+QIYD+++ LPP QV
Sbjct: 194 LSRGFKDQIYDIFQLLPPKIQV 215
>DICTYBASE|DDB_G0269146 [details] [associations]
symbol:ifdA "eukaryotic translation initiation factor
4A" species:44689 "Dictyostelium discoideum" [GO:0045335
"phagocytic vesicle" evidence=IDA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0044351 "macropinocytosis"
evidence=RCA] InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270
Pfam:PF00271 PROSITE:PS51194 SMART:SM00490 dictyBase:DDB_G0269146
GO:GO:0005524 EMBL:AAFI02000005 GenomeReviews:CM000150_GR
GO:GO:0045335 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 HSSP:P10081 KO:K03257 OMA:AVINYHI EMBL:U78759
RefSeq:XP_645917.1 ProteinModelPortal:P90529 STRING:P90529
PRIDE:P90529 EnsemblProtists:DDB0191262 GeneID:8616858
KEGG:ddi:DDB_G0269146 InParanoid:P90529 Uniprot:P90529
Length = 395
Score = 388 (141.6 bits), Expect = 1.1e-60, Sum P(2) = 1.1e-60
Identities = 77/118 (65%), Positives = 94/118 (79%)
Query: 81 QVDWLTEKMREANFTVSSMHGDMPQKERDGIMKEFRSGTSRVLITTDVWARGIDVQQVSL 140
+VDWLT KM E FTVSS HGD QK+RDGI++ FRSG +RVLITTD+ ARGIDVQQVSL
Sbjct: 275 KVDWLTSKMTEQKFTVSSTHGD--QKDRDGILQAFRSGATRVLITTDLLARGIDVQQVSL 332
Query: 141 VINYDLPNNRELYIHRIGRSGRFGRKGVAISFVKSDDIRILRDIEQYYSTQIDEMPMN 198
VIN+DLP N E YIHRIGRSGRFGRKGVAI+F+ + + ++ ++Y+T I EMP +
Sbjct: 333 VINFDLPTNIENYIHRIGRSGRFGRKGVAINFITDAERGQIDELSRHYNTYIAEMPQD 390
Score = 251 (93.4 bits), Expect = 1.1e-60, Sum P(2) = 1.1e-60
Identities = 43/98 (43%), Positives = 70/98 (71%)
Query: 1 MNVQCHACIGGTNLSEDLRKLDYGQHVVSGTPGRVFDMIRRRVLRTRNIKMLVLDEADEM 60
++++ +ACIGGT +++D++ L G HVV GTPGRVF+M+ R ++ I++ LDEADEM
Sbjct: 119 LHIKSYACIGGTKITDDIQALQSGVHVVVGTPGRVFEMLSRGIINRDTIRIFCLDEADEM 178
Query: 61 LNKGFKEQIYDVYRYLPPATQVDWLTEKMREANFTVSS 98
L++GFK+QIY+++R+LP QV + M + ++S
Sbjct: 179 LSRGFKDQIYEIFRFLPKTIQVGLFSATMTDETLGITS 216
>UNIPROTKB|E7EQG2 [details] [associations]
symbol:EIF4A2 "Eukaryotic initiation factor 4A-II"
species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014
PROSITE:PS51195 EMBL:AC112907 HGNC:HGNC:3284 ChiTaRS:EIF4A2
IPI:IPI00924536 ProteinModelPortal:E7EQG2 SMR:E7EQG2 PRIDE:E7EQG2
Ensembl:ENST00000425053 ArrayExpress:E7EQG2 Bgee:E7EQG2
Uniprot:E7EQG2
Length = 362
Score = 316 (116.3 bits), Expect = 3.3e-53, Sum P(2) = 3.3e-53
Identities = 62/82 (75%), Positives = 70/82 (85%)
Query: 75 YLPPATQVDWLTEKMREANFTVSSMHGDMPQKERDGIMKEFRSGTSRVLITTDVWARGID 134
+L +VDWLTEKM +FTVS++HGDM QKERD IM+EFRSG+SRVLITTD+ ARGID
Sbjct: 279 FLNTRRKVDWLTEKMHARDFTVSALHGDMDQKERDVIMREFRSGSSRVLITTDLLARGID 338
Query: 135 VQQVSLVINYDLPNNRELYIHR 156
VQQVSLVINYDLP NRE YIHR
Sbjct: 339 VQQVSLVINYDLPTNRENYIHR 360
Score = 252 (93.8 bits), Expect = 3.3e-53, Sum P(2) = 3.3e-53
Identities = 49/90 (54%), Positives = 65/90 (72%)
Query: 1 MNVQCHACIGGTNLSEDLRKLDY-GQHVVSGTPGRVFDMIRRRVLRTRNIKMLVLDEADE 59
M CHACIGGTN+ +++KL H+V GTPGRVFDM+ RR L + IKM VLDEADE
Sbjct: 128 MGATCHACIGGTNVRNEMQKLQAEAPHIVVGTPGRVFDMLNRRYLSPKWIKMFVLDEADE 187
Query: 60 MLNKGFKEQIYDVYRYLPPATQVDWLTEKM 89
ML++GFK+QIY++++ L + QV L+ M
Sbjct: 188 MLSRGFKDQIYEIFQKLNTSIQVVLLSATM 217
>FB|FBgn0001942 [details] [associations]
symbol:eIF-4a "Eukaryotic initiation factor 4a" species:7227
"Drosophila melanogaster" [GO:0003724 "RNA helicase activity"
evidence=ISS] [GO:0006413 "translational initiation"
evidence=ISS;NAS] [GO:0016281 "eukaryotic translation initiation
factor 4F complex" evidence=ISS] [GO:0003743 "translation
initiation factor activity" evidence=ISS;NAS] [GO:0005829 "cytosol"
evidence=ISS;NAS] [GO:0017116 "single-stranded DNA-dependent
ATP-dependent DNA helicase activity" evidence=NAS] [GO:0006268 "DNA
unwinding involved in replication" evidence=NAS] [GO:0000339 "RNA
cap binding" evidence=NAS] [GO:0003729 "mRNA binding" evidence=NAS]
[GO:0007446 "imaginal disc growth" evidence=TAS] [GO:0002168
"instar larval development" evidence=TAS] [GO:0009950
"dorsal/ventral axis specification" evidence=IMP] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0000381 "regulation of alternative mRNA
splicing, via spliceosome" evidence=IMP] [GO:0005634 "nucleus"
evidence=IC] [GO:0000022 "mitotic spindle elongation" evidence=IMP]
[GO:0007052 "mitotic spindle organization" evidence=IMP]
[GO:0005875 "microtubule associated complex" evidence=IDA]
[GO:0007067 "mitosis" evidence=IMP] [GO:0006974 "response to DNA
damage stimulus" evidence=IMP] [GO:0048132 "female germ-line stem
cell division" evidence=IGI;IMP] [GO:0030718 "germ-line stem cell
maintenance" evidence=IMP] [GO:0048477 "oogenesis" evidence=IGI]
[GO:0072686 "mitotic spindle" evidence=IDA] [GO:0051297 "centrosome
organization" evidence=IMP] [GO:0005813 "centrosome" evidence=IDA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005829 GO:GO:0005524 GO:GO:0005634
GO:GO:0005813 GO:GO:0005875 GO:GO:0007067 EMBL:AE014134
GO:GO:0051297 GO:GO:0016281 GO:GO:0006974 GO:GO:0003743
GO:GO:0030718 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0000022 GO:GO:0072686 GO:GO:0048132 GO:GO:0002168
GO:GO:0008026 GO:GO:0000381 eggNOG:COG0513 GO:GO:0003724
InterPro:IPR014014 PROSITE:PS51195 GO:GO:0007446
GeneTree:ENSGT00530000062880 KO:K03257 OMA:TENDARQ EMBL:X69045
EMBL:AF145621 EMBL:AY069283 EMBL:AY121623 PIR:S30278
RefSeq:NP_001245907.1 RefSeq:NP_476595.1 RefSeq:NP_723137.1
RefSeq:NP_723138.1 RefSeq:NP_723139.1 UniGene:Dm.7226
ProteinModelPortal:Q02748 SMR:Q02748 DIP:DIP-18113N IntAct:Q02748
MINT:MINT-892982 STRING:Q02748 PaxDb:Q02748 PRIDE:Q02748
EnsemblMetazoa:FBtr0079175 EnsemblMetazoa:FBtr0079176
EnsemblMetazoa:FBtr0079177 EnsemblMetazoa:FBtr0079178
EnsemblMetazoa:FBtr0307068 EnsemblMetazoa:FBtr0331201 GeneID:33835
KEGG:dme:Dmel_CG9075 CTD:33835 FlyBase:FBgn0001942
InParanoid:Q02748 OrthoDB:EOG4B8GVF PhylomeDB:Q02748 ChiTaRS:eIF-4a
GenomeRNAi:33835 NextBio:785508 Bgee:Q02748 GermOnline:CG9075
Uniprot:Q02748
Length = 403
Score = 453 (164.5 bits), Expect = 7.3e-43, P = 7.3e-43
Identities = 94/167 (56%), Positives = 118/167 (70%)
Query: 38 MIRRRVLRTRNIKMLVLDEADEMLNKGFKEQIYDVYR------YLPPATQVDWLTEKMRE 91
++++ L IK ++ E G +YD + +VD LT++M
Sbjct: 232 LVKKEELTLEGIKQFYVNVKQENWKLGTLCDLYDTLSITQSVIFCNTRRKVDQLTQEMSI 291
Query: 92 ANFTVSSMHGDMPQKERDGIMKEFRSGTSRVLITTDVWARGIDVQQVSLVINYDLPNNRE 151
NFTVS+MHGDM Q++R+ IMK+FRSG+SRVLITTD+ ARGIDVQQVSLVINYDLP+NRE
Sbjct: 292 HNFTVSAMHGDMEQRDREVIMKQFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPSNRE 351
Query: 152 LYIHRIGRSGRFGRKGVAISFVKSDDIRILRDIEQYYSTQIDEMPMN 198
YIHRIGR GRFGRKGVAI+F+ DD RIL+DIEQ+Y T I+EMP N
Sbjct: 352 NYIHRIGRGGRFGRKGVAINFITDDDRRILKDIEQFYHTTIEEMPAN 398
Score = 290 (107.1 bits), Expect = 1.4e-25, P = 1.4e-25
Identities = 57/89 (64%), Positives = 69/89 (77%)
Query: 1 MNVQCHACIGGTNLSEDLRKLDYGQHVVSGTPGRVFDMIRRRVLRTRNIKMLVLDEADEM 60
M V HACIGGTN+ ED R L+ G HVV GTPGRV+DMI R+VLRT+ IK+ VLDEADEM
Sbjct: 125 MKVHSHACIGGTNVREDARILESGCHVVVGTPGRVYDMINRKVLRTQYIKLFVLDEADEM 184
Query: 61 LNKGFKEQIYDVYRYLPPATQVDWLTEKM 89
L++GFK+QI DV++ LPP QV L+ M
Sbjct: 185 LSRGFKDQIQDVFKMLPPDVQVILLSATM 213
>CGD|CAL0004095 [details] [associations]
symbol:TIF species:5476 "Candida albicans" [GO:0003743
"translation initiation factor activity" evidence=ISS] [GO:0006413
"translational initiation" evidence=ISS] [GO:0005829 "cytosol"
evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0016281 "eukaryotic translation initiation factor 4F complex"
evidence=IEA] [GO:0004004 "ATP-dependent RNA helicase activity"
evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 CGD:CAL0004095 GO:GO:0005524
GO:GO:0005737 GO:GO:0003743 EMBL:AACQ01000045 EMBL:AACQ01000042
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195 KO:K03257
EMBL:D84472 RefSeq:XP_718147.1 RefSeq:XP_718416.1
ProteinModelPortal:P87206 STRING:P87206 PRIDE:P87206 GeneID:3639917
GeneID:3640190 KEGG:cal:CaO19.10834 KEGG:cal:CaO19.3324
Uniprot:P87206
Length = 397
Score = 438 (159.2 bits), Expect = 2.8e-41, P = 2.8e-41
Identities = 82/117 (70%), Positives = 104/117 (88%)
Query: 80 TQVDWLTEKMREANFTVSSMHGDMPQKERDGIMKEFRSGTSRVLITTDVWARGIDVQQVS 139
++V++LT K+RE +FTVS++H D+PQ ERD IMKEFRSG+SR+LI+TD+ ARGIDVQQVS
Sbjct: 273 SKVEFLTNKLREQHFTVSAIHADLPQAERDTIMKEFRSGSSRILISTDLLARGIDVQQVS 332
Query: 140 LVINYDLPNNRELYIHRIGRSGRFGRKGVAISFVKSDDIRILRDIEQYYSTQIDEMP 196
LVINYDLP N+E YIHRIGR GRFGRKGVAI+FV D+ ++R+IE++YSTQI+EMP
Sbjct: 333 LVINYDLPANKENYIHRIGRGGRFGRKGVAINFVTDRDVGMMREIEKFYSTQIEEMP 389
Score = 251 (93.4 bits), Expect = 3.1e-21, P = 3.1e-21
Identities = 49/104 (47%), Positives = 68/104 (65%)
Query: 1 MNVQCHACIGGTNLSEDLRKLDYGQHVVSGTPGRVFDMIRRRVLRTRNIKMLVLDEADEM 60
+ V HA IGGT++S+D+ G +V GTPGRV DMI RR +T +KM +LDEADEM
Sbjct: 118 LKVTVHASIGGTSMSDDIEAFRSGVQIVVGTPGRVLDMIERRYFKTDKVKMFILDEADEM 177
Query: 61 LNKGFKEQIYDVYRYLPPATQVDWLTEKMREANFTVSSMHGDMP 104
L+ GFKEQIY+++R LP TQ+ L+ M + V++ + P
Sbjct: 178 LSSGFKEQIYNIFRLLPETTQIVLLSATMPQDVLEVTTKFMNNP 221
>UNIPROTKB|P87206 [details] [associations]
symbol:TIF1 "ATP-dependent RNA helicase eIF4A"
species:237561 "Candida albicans SC5314" [GO:0003743 "translation
initiation factor activity" evidence=ISS] [GO:0006413
"translational initiation" evidence=ISS] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 CGD:CAL0004095
GO:GO:0005524 GO:GO:0005737 GO:GO:0003743 EMBL:AACQ01000045
EMBL:AACQ01000042 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
KO:K03257 EMBL:D84472 RefSeq:XP_718147.1 RefSeq:XP_718416.1
ProteinModelPortal:P87206 STRING:P87206 PRIDE:P87206 GeneID:3639917
GeneID:3640190 KEGG:cal:CaO19.10834 KEGG:cal:CaO19.3324
Uniprot:P87206
Length = 397
Score = 438 (159.2 bits), Expect = 2.8e-41, P = 2.8e-41
Identities = 82/117 (70%), Positives = 104/117 (88%)
Query: 80 TQVDWLTEKMREANFTVSSMHGDMPQKERDGIMKEFRSGTSRVLITTDVWARGIDVQQVS 139
++V++LT K+RE +FTVS++H D+PQ ERD IMKEFRSG+SR+LI+TD+ ARGIDVQQVS
Sbjct: 273 SKVEFLTNKLREQHFTVSAIHADLPQAERDTIMKEFRSGSSRILISTDLLARGIDVQQVS 332
Query: 140 LVINYDLPNNRELYIHRIGRSGRFGRKGVAISFVKSDDIRILRDIEQYYSTQIDEMP 196
LVINYDLP N+E YIHRIGR GRFGRKGVAI+FV D+ ++R+IE++YSTQI+EMP
Sbjct: 333 LVINYDLPANKENYIHRIGRGGRFGRKGVAINFVTDRDVGMMREIEKFYSTQIEEMP 389
Score = 251 (93.4 bits), Expect = 3.1e-21, P = 3.1e-21
Identities = 49/104 (47%), Positives = 68/104 (65%)
Query: 1 MNVQCHACIGGTNLSEDLRKLDYGQHVVSGTPGRVFDMIRRRVLRTRNIKMLVLDEADEM 60
+ V HA IGGT++S+D+ G +V GTPGRV DMI RR +T +KM +LDEADEM
Sbjct: 118 LKVTVHASIGGTSMSDDIEAFRSGVQIVVGTPGRVLDMIERRYFKTDKVKMFILDEADEM 177
Query: 61 LNKGFKEQIYDVYRYLPPATQVDWLTEKMREANFTVSSMHGDMP 104
L+ GFKEQIY+++R LP TQ+ L+ M + V++ + P
Sbjct: 178 LSSGFKEQIYNIFRLLPETTQIVLLSATMPQDVLEVTTKFMNNP 221
>UNIPROTKB|J3KT12 [details] [associations]
symbol:EIF4A1 "Eukaryotic initiation factor 4A-I"
species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
EMBL:AC016876 HGNC:HGNC:3282 ChiTaRS:EIF4A1
ProteinModelPortal:J3KT12 Ensembl:ENST00000582746 Uniprot:J3KT12
Length = 341
Score = 260 (96.6 bits), Expect = 3.2e-41, Sum P(2) = 3.2e-41
Identities = 50/90 (55%), Positives = 65/90 (72%)
Query: 1 MNVQCHACIGGTNLSEDLRKLDY-GQHVVSGTPGRVFDMIRRRVLRTRNIKMLVLDEADE 59
M CHACIGGTN+ +++KL H++ GTPGRVFDM+ RR L + IKM VLDEADE
Sbjct: 127 MGASCHACIGGTNVRAEVQKLQMEAPHIIVGTPGRVFDMLNRRYLSPKYIKMFVLDEADE 186
Query: 60 MLNKGFKEQIYDVYRYLPPATQVDWLTEKM 89
ML++GFK+QIYD+++ L TQV L+ M
Sbjct: 187 MLSRGFKDQIYDIFQKLNSNTQVVLLSATM 216
Score = 194 (73.4 bits), Expect = 3.2e-41, Sum P(2) = 3.2e-41
Identities = 38/51 (74%), Positives = 44/51 (86%)
Query: 81 QVDWLTEKMREANFTVSSMHGDMPQKERDGIMKEFRSGTSRVLITTDVWAR 131
+VDWLTEKM +FTVS+MHGDM QKERD IM+EFRSG+SRVLITTD+ R
Sbjct: 284 KVDWLTEKMHARDFTVSAMHGDMDQKERDVIMREFRSGSSRVLITTDLLNR 334
>UNIPROTKB|J3KSZ0 [details] [associations]
symbol:EIF4A1 "Eukaryotic initiation factor 4A-I"
species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 EMBL:AC016876 HGNC:HGNC:3282
ChiTaRS:EIF4A1 Ensembl:ENST00000583389 Uniprot:J3KSZ0
Length = 230
Score = 260 (96.6 bits), Expect = 4.1e-41, Sum P(2) = 4.1e-41
Identities = 50/90 (55%), Positives = 65/90 (72%)
Query: 1 MNVQCHACIGGTNLSEDLRKLDY-GQHVVSGTPGRVFDMIRRRVLRTRNIKMLVLDEADE 59
M CHACIGGTN+ +++KL H++ GTPGRVFDM+ RR L + IKM VLDEADE
Sbjct: 10 MGASCHACIGGTNVRAEVQKLQMEAPHIIVGTPGRVFDMLNRRYLSPKYIKMFVLDEADE 69
Query: 60 MLNKGFKEQIYDVYRYLPPATQVDWLTEKM 89
ML++GFK+QIYD+++ L TQV L+ M
Sbjct: 70 MLSRGFKDQIYDIFQKLNSNTQVVLLSATM 99
Score = 193 (73.0 bits), Expect = 4.1e-41, Sum P(2) = 4.1e-41
Identities = 37/48 (77%), Positives = 43/48 (89%)
Query: 81 QVDWLTEKMREANFTVSSMHGDMPQKERDGIMKEFRSGTSRVLITTDV 128
+VDWLTEKM +FTVS+MHGDM QKERD IM+EFRSG+SRVLITTD+
Sbjct: 167 KVDWLTEKMHARDFTVSAMHGDMDQKERDVIMREFRSGSSRVLITTDL 214
>SGD|S000002428 [details] [associations]
symbol:FAL1 "Nucleolar protein required for maturation of 18S
rRNA" species:4932 "Saccharomyces cerevisiae" [GO:0005730
"nucleolus" evidence=IEA;IDA] [GO:0042254 "ribosome biogenesis"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0000462 "maturation of SSU-rRNA from tricistronic
rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=IMP]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0097078 "FAl1-SGD1 complex" evidence=IPI] [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0003723 "RNA binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0006364 "rRNA
processing" evidence=IEA] [GO:0004004 "ATP-dependent RNA helicase
activity" evidence=ISA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 SGD:S000002428 GO:GO:0005524
GO:GO:0005730 EMBL:BK006938 GO:GO:0003723 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0004004 eggNOG:COG0513
HOGENOM:HOG000268797 InterPro:IPR014014 PROSITE:PS51195 EMBL:X95966
EMBL:Z49770 GeneTree:ENSGT00680000100003 GO:GO:0000462 KO:K13025
OrthoDB:EOG4HTD1W EMBL:Z74317 EMBL:AY723767 PIR:S54644
RefSeq:NP_010304.3 RefSeq:NP_010309.3 ProteinModelPortal:Q12099
SMR:Q12099 DIP:DIP-4516N IntAct:Q12099 MINT:MINT-503789
STRING:Q12099 PaxDb:Q12099 PeptideAtlas:Q12099 EnsemblFungi:YDR021W
GeneID:851584 GeneID:851590 KEGG:sce:YDR021W KEGG:sce:YDR026C
CYGD:YDR021w KO:K09424 OMA:IFGKQPF NextBio:969055
Genevestigator:Q12099 GermOnline:YDR021W GO:GO:0097078
Uniprot:Q12099
Length = 399
Score = 420 (152.9 bits), Expect = 2.3e-39, P = 2.3e-39
Identities = 79/118 (66%), Positives = 99/118 (83%)
Query: 81 QVDWLTEKMREANFTVSSMHGDMPQKERDGIMKEFRSGTSRVLITTDVWARGIDVQQVSL 140
+VDWL++++ ++NF V SMHGDM Q+ERD +M +FR+G SRVLI+TDVWARGIDVQQVSL
Sbjct: 277 KVDWLSQRLIQSNFAVVSMHGDMKQEERDKVMNDFRTGHSRVLISTDVWARGIDVQQVSL 336
Query: 141 VINYDLPNNRELYIHRIGRSGRFGRKGVAISFVKSDDIRILRDIEQYYSTQIDEMPMN 198
VINYDLP E YIHRIGRSGRFGRKGVAI+F+ D+ LR+IE++YS +I+ MP N
Sbjct: 337 VINYDLPEIIENYIHRIGRSGRFGRKGVAINFITKADLAKLREIEKFYSIKINPMPAN 394
Score = 241 (89.9 bits), Expect = 4.6e-20, P = 4.6e-20
Identities = 57/133 (42%), Positives = 83/133 (62%)
Query: 1 MNVQCHACIGGTNLSEDLRKLD-YGQHVVSGTPGRVFDMIRRRVLRTRNIKMLVLDEADE 59
MNV A GG L +DL+K+ +G VSGTPGRV DMI++++L+TRN++MLVLDEADE
Sbjct: 118 MNVNAFAITGGKTLKDDLKKMQKHGCQAVSGTPGRVLDMIKKQMLQTRNVQMLVLDEADE 177
Query: 60 MLNK--GFKEQIYDVYRYLPPATQVDWLTEKMREANFTVSSMHGDMPQK---ERDGIMKE 114
+L++ GFK+QIYD++ LP QV ++ M + V+ + P K +RD I E
Sbjct: 178 LLSETLGFKQQIYDIFAKLPKNCQVVVVSATMNKDILEVTRKFMNDPVKILVKRDEISLE 237
Query: 115 FRSGTSRVLITTD 127
G + ++ D
Sbjct: 238 ---GIKQYVVNVD 247
>WB|WBGene00018997 [details] [associations]
symbol:F57B9.3 species:6239 "Caenorhabditis elegans"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0009792 "embryo development ending in birth or
egg hatching" evidence=IMP] [GO:0000003 "reproduction"
evidence=IMP] [GO:0040007 "growth" evidence=IMP] [GO:0002119
"nematode larval development" evidence=IMP] [GO:0040011
"locomotion" evidence=IMP] [GO:0008340 "determination of adult
lifespan" evidence=IMP] [GO:0019915 "lipid storage" evidence=IMP]
[GO:0040010 "positive regulation of growth rate" evidence=IMP]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0008340 GO:GO:0009792
GO:GO:0040007 GO:GO:0040010 GO:GO:0002119 GO:GO:0040011
GO:GO:0000003 GO:GO:0003676 GO:GO:0019915 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 EMBL:FO081266 GO:GO:0008026
eggNOG:COG0513 HOGENOM:HOG000268797 InterPro:IPR014014
PROSITE:PS51195 HSSP:P10081 GeneTree:ENSGT00530000062880 KO:K03257
PIR:E88493 RefSeq:NP_498514.1 UniGene:Cel.32055
ProteinModelPortal:Q20935 SMR:Q20935 STRING:Q20935 PaxDb:Q20935
EnsemblMetazoa:F57B9.3 GeneID:186440 KEGG:cel:CELE_F57B9.3
UCSC:F57B9.3 CTD:186440 WormBase:F57B9.3 InParanoid:Q20935
NextBio:931850 Uniprot:Q20935
Length = 363
Score = 276 (102.2 bits), Expect = 1.7e-38, Sum P(2) = 1.7e-38
Identities = 55/116 (47%), Positives = 80/116 (68%)
Query: 81 QVDWLTEKMREANFTVSSMHGDMPQKERDGIMKEFRSGTSRVLITTDVWARGIDVQQVSL 140
+V LTE++ VS HG+M ER+ ++K+F S +RVL+TTD+ ARG+++++ SL
Sbjct: 239 RVTQLTEQLMSIPIKVSCFHGNMEHNEREDMVKDFNSRNTRVLVTTDLMARGMNIRK-SL 297
Query: 141 VINYDLPNNRELYIHRIGRSGRFGRKGVAISFVKSDDIRILRDIEQYYSTQIDEMP 196
+INYD+ N E Y+ R GR G FG KG+ ISF +DI L+ IE +YST+I+EMP
Sbjct: 298 IINYDVSGNMENYMLRNGRQGNFGSKGLPISFFTENDISDLKKIENHYSTRIEEMP 353
Score = 152 (58.6 bits), Expect = 1.7e-38, Sum P(2) = 1.7e-38
Identities = 39/89 (43%), Positives = 51/89 (57%)
Query: 1 MNVQCHACIGGTNLSEDLRKLDYGQHVVSGTPGRVFDMIRRRVLRTRNIKMLVLDEADEM 60
+NV C+G +E+ D HV+ GTP D + T IKM VLDEADEM
Sbjct: 91 LNVNA-TCLGFDTTAEN----DKISHVLMGTPK---DFLSNIPSDTSRIKMFVLDEADEM 142
Query: 61 LNKGFKEQIYDVYRYLPPATQVDWLTEKM 89
L+KGFK+QIY+V+R +P QV L+ M
Sbjct: 143 LSKGFKDQIYEVFRSMPQDVQVVLLSATM 171
Score = 48 (22.0 bits), Expect = 2.1e-12, Sum P(2) = 2.1e-12
Identities = 15/40 (37%), Positives = 21/40 (52%)
Query: 160 SGRFGRKGVAISFVKSDDIRILRDIEQYY-STQIDEMPMN 198
+ RF R + I VK D++ L I Q+Y + Q DE N
Sbjct: 179 TNRFMRDPIRI-LVKKDELT-LEGIRQFYINVQKDEWKFN 216
>ZFIN|ZDB-GENE-030131-6611 [details] [associations]
symbol:wu:fk48d07 "wu:fk48d07" species:7955 "Danio
rerio" [GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490
ZFIN:ZDB-GENE-030131-6611 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
GeneTree:ENSGT00530000063986 KO:K12614 InterPro:IPR014014
PROSITE:PS51195 OMA:HIDPARF EMBL:CR391937 IPI:IPI00901625
RefSeq:XP_001340860.1 UniGene:Dr.104819 UniGene:Dr.127773
Ensembl:ENSDART00000114495 GeneID:100007313 KEGG:dre:100007313
NextBio:20787456 Uniprot:E7F1G8
Length = 483
Score = 262 (97.3 bits), Expect = 1.2e-37, Sum P(2) = 1.2e-37
Identities = 52/127 (40%), Positives = 83/127 (65%)
Query: 79 ATQ-VDWLTEKMREANFTVSSMHGDMPQKERDGIMKEFRSGTSRVLITTDVWARGIDVQQ 137
+TQ V+ L +K+ + ++ +H M Q+ R+ + +FR+G R L+ TD++ RGID+Q
Sbjct: 335 STQRVELLAKKITQLGYSCFYIHAKMMQEYRNRVFHDFRNGLCRNLVCTDLFTRGIDIQA 394
Query: 138 VSLVINYDLPNNRELYIHRIGRSGRFGRKGVAISFVKSDDIRILRDIEQYYSTQIDEMPM 197
V++VIN+D P N E Y+HRIGRSGR+G G+AI+ + S+D L+ IE T I +P
Sbjct: 395 VNVVINFDFPKNAETYLHRIGRSGRYGHLGLAINLITSEDRFNLKGIEDQLMTDIKPIPS 454
Query: 198 NGKRSLH 204
+ +SL+
Sbjct: 455 SIDKSLY 461
Score = 169 (64.5 bits), Expect = 1.2e-37, Sum P(2) = 1.2e-37
Identities = 31/80 (38%), Positives = 52/80 (65%)
Query: 3 VQCHACIGGTNLSEDLRKLDYGQHVVSGTPGRVFDMIRRRVLRTRNIKMLVLDEADEMLN 62
++ A GGTNL +D+ +LD HV+ TPGR+ D+I++ V + ++M V+DEAD++L+
Sbjct: 186 IKVMATTGGTNLRDDIMRLDEIVHVIIATPGRILDLIKKGVAKVDKVQMAVMDEADKLLS 245
Query: 63 KGFKEQIYDVYRYLPPATQV 82
+ F I D+ +LP Q+
Sbjct: 246 QDFVVLIEDIISFLPKKRQI 265
>ZFIN|ZDB-GENE-070912-83 [details] [associations]
symbol:ddx6 "DEAD (Asp-Glu-Ala-Asp) box polypeptide
6" species:7955 "Danio rerio" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 ZFIN:ZDB-GENE-070912-83 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
GeneTree:ENSGT00530000063986 InterPro:IPR014014 PROSITE:PS51195
EMBL:CR759774 IPI:IPI00505165 ProteinModelPortal:E7FD91
Ensembl:ENSDART00000087382 Bgee:E7FD91 Uniprot:E7FD91
Length = 485
Score = 264 (98.0 bits), Expect = 2.4e-37, Sum P(2) = 2.4e-37
Identities = 58/151 (38%), Positives = 90/151 (59%)
Query: 61 LNKGFKE-QIYDVYRYLPPATQVDWLTEKMREANFTVSSMHGDMPQKERDGIMKEFRSGT 119
LN F QI + + +V+ L +K+ + ++ +H M Q+ R+ + +FR+G
Sbjct: 327 LNTLFSRLQINQSIIFCNSSQRVELLAKKISQLGYSCFYIHAKMRQEHRNRVFHDFRNGL 386
Query: 120 SRVLITTDVWARGIDVQQVSLVINYDLPNNRELYIHRIGRSGRFGRKGVAISFVKSDDIR 179
R L+ TD++ RGID+Q V++VIN+D P E Y+HRIGRSGRFG G+AI+ + DD
Sbjct: 387 CRNLVCTDLFTRGIDIQAVNVVINFDFPKLGETYLHRIGRSGRFGHLGLAINLITYDDRF 446
Query: 180 ILRDIEQYYSTQIDEMPMNGKRSLHSYPARY 210
L+ IE+ T+I +P + +SL Y A Y
Sbjct: 447 NLKGIEEQLGTEIKPIPSSIDKSL--YVAEY 475
Score = 164 (62.8 bits), Expect = 2.4e-37, Sum P(2) = 2.4e-37
Identities = 31/80 (38%), Positives = 52/80 (65%)
Query: 3 VQCHACIGGTNLSEDLRKLDYGQHVVSGTPGRVFDMIRRRVLRTRNIKMLVLDEADEMLN 62
V+ A GGTNL +D+ +LD HVV TPGR+ D+I++ V + ++M+VLDEAD++L+
Sbjct: 196 VKVMATTGGTNLRDDIMRLDETVHVVIATPGRILDLIKKGVAKVGQVQMIVLDEADKLLS 255
Query: 63 KGFKEQIYDVYRYLPPATQV 82
+ F + + ++ L Q+
Sbjct: 256 QDFVQMMEEILSSLSKQRQI 275
>TIGR_CMR|SO_4034 [details] [associations]
symbol:SO_4034 "ATP-dependent RNA helicase DeaD"
species:211586 "Shewanella oneidensis MR-1" [GO:0008026
"ATP-dependent helicase activity" evidence=ISS] [GO:0009631 "cold
acclimation" evidence=ISS] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0003676
EMBL:AE014299 GenomeReviews:AE014299_GR InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014
PROSITE:PS51195 HOGENOM:HOG000268810 KO:K05592 InterPro:IPR005580
Pfam:PF03880 HSSP:P10081 OMA:LPQGMPK RefSeq:NP_719564.1
ProteinModelPortal:Q8EA75 GeneID:1171660 KEGG:son:SO_4034
PATRIC:23527732 ProtClustDB:CLSK907463 Uniprot:Q8EA75
Length = 623
Score = 266 (98.7 bits), Expect = 3.0e-37, Sum P(2) = 3.0e-37
Identities = 50/111 (45%), Positives = 78/111 (70%)
Query: 85 LTEKMREANFTVSSMHGDMPQKERDGIMKEFRSGTSRVLITTDVWARGIDVQQVSLVINY 144
L EK+ + S +HGDM Q+ R+ +++ ++G +LI TDV ARG+DV+++ V+NY
Sbjct: 260 LAEKLEARGYASSPLHGDMNQQARERAVEQLKNGKLDILIATDVAARGLDVERIGHVVNY 319
Query: 145 DLPNNRELYIHRIGRSGRFGRKGVAISFVKSDDIRILRDIEQYYSTQIDEM 195
D+P + E Y+HRIGR+GR GR G+AI FV S ++R+LR IE+ +++I M
Sbjct: 320 DIPYDTEAYVHRIGRTGRAGRTGMAILFVTSREMRMLRTIERATNSRISPM 370
Score = 167 (63.8 bits), Expect = 3.0e-37, Sum P(2) = 3.0e-37
Identities = 36/91 (39%), Positives = 51/91 (56%)
Query: 10 GGTNLSEDLRKLDYGQHVVSGTPGRVFDMIRRRVLRTRNIKMLVLDEADEMLNKGFKEQI 69
GG ++ + L L G V+ GTPGRV D +RR L+ ++ LVLDEADEML GF + I
Sbjct: 110 GGQSMQQQLNALKRGPQVIVGTPGRVMDHMRRGTLKLETLQALVLDEADEMLKMGFIDDI 169
Query: 70 YDVYRYLPPATQVDWLTEKMREANFTVSSMH 100
+ + PP Q+ + M E V++ H
Sbjct: 170 EWILEHTPPQRQLALFSATMPEQIKRVANKH 200
>TAIR|locus:2087852 [details] [associations]
symbol:PMH2 "putative mitochondrial RNA helicase 2"
species:3702 "Arabidopsis thaliana" [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=ISM] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA;ISS] [GO:0005739 "mitochondrion"
evidence=IDA] [GO:0005730 "nucleolus" evidence=IDA] [GO:0005618
"cell wall" evidence=IDA] [GO:0000373 "Group II intron splicing"
evidence=IMP] [GO:0009409 "response to cold" evidence=IEP]
[GO:0043234 "protein complex" evidence=IDA] InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005739 GO:GO:0005524
GO:GO:0005618 EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0043234
GO:GO:0005730 GO:GO:0009409 GO:GO:0003723 EMBL:AB022215
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
GO:GO:0000373 eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
EMBL:AY062502 EMBL:AY093256 IPI:IPI00524382 RefSeq:NP_188872.2
UniGene:At.27322 ProteinModelPortal:Q9LUW5 SMR:Q9LUW5 STRING:Q9LUW5
PaxDb:Q9LUW5 PRIDE:Q9LUW5 EnsemblPlants:AT3G22330.1 GeneID:821802
KEGG:ath:AT3G22330 GeneFarm:1033 TAIR:At3g22330
HOGENOM:HOG000268800 InParanoid:Q9LUW5 OMA:HGRGRNP PhylomeDB:Q9LUW5
ProtClustDB:CLSN2684125 Genevestigator:Q9LUW5 GermOnline:AT3G22330
Uniprot:Q9LUW5
Length = 616
Score = 241 (89.9 bits), Expect = 9.7e-37, Sum P(2) = 9.7e-37
Identities = 44/104 (42%), Positives = 67/104 (64%)
Query: 93 NFTVSSMHGDMPQKERDGIMKEFRSGTSRVLITTDVWARGIDVQQVSLVINYDLPNNREL 152
+F ++HGD+ Q +R+ + FR G +L+ TDV ARG+DV V L+I+Y+LPNN E
Sbjct: 372 SFKCEALHGDISQSQRERTLAGFRDGHFNILVATDVAARGLDVPNVDLIIHYELPNNTET 431
Query: 153 YIHRIGRSGRFGRKGVAISFVKSDDIRILRDIEQYYSTQIDEMP 196
++HR GR+GR G+KG AI D R ++ IE+ ++ E+P
Sbjct: 432 FVHRTGRTGRAGKKGSAILIYSQDQSRAVKIIEREVGSRFTELP 475
Score = 188 (71.2 bits), Expect = 9.7e-37, Sum P(2) = 9.7e-37
Identities = 47/116 (40%), Positives = 63/116 (54%)
Query: 8 CI-GGTNLSEDLRKLDYGQHVVSGTPGRVFDMIRRRVLRTRNIKMLVLDEADEMLNKGFK 66
C+ GGT + + +R+LDYG V GTPGRV D+++R L ++ +VLDEAD+ML GF
Sbjct: 209 CLYGGTPIGQQMRQLDYGVDVAVGTPGRVIDLMKRGALNLSEVQFVVLDEADQMLQVGFA 268
Query: 67 EQIYDVYRYLPP--------ATQVDW---LTEKMREANFTVSSMHGDMPQKERDGI 111
E + + LP AT W LT+K TV + GD QK DGI
Sbjct: 269 EDVEIILEKLPEKRQSMMFSATMPSWIRSLTKKYLNNPLTVDLV-GDSDQKLADGI 323
>CGD|CAL0006152 [details] [associations]
symbol:DHH1 species:5476 "Candida albicans" [GO:0010494
"cytoplasmic stress granule" evidence=IDA] [GO:0000932 "cytoplasmic
mRNA processing body" evidence=IEA] [GO:0030996 "cell cycle arrest
in response to nitrogen starvation" evidence=IEA] [GO:0034063
"stress granule assembly" evidence=IEA] [GO:0000753 "cell
morphogenesis involved in conjugation with cellular fusion"
evidence=IEA] [GO:0033962 "cytoplasmic mRNA processing body
assembly" evidence=IEA] [GO:0000290 "deadenylation-dependent
decapping of nuclear-transcribed mRNA" evidence=IEA] [GO:0031142
"induction of conjugation upon nitrogen starvation" evidence=IEA]
[GO:0003724 "RNA helicase activity" evidence=IEA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 CGD:CAL0006152 GO:GO:0005524 GO:GO:0006417
GO:GO:0006397 GO:GO:0003723 GO:GO:0000932 GO:GO:0051028
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0010494
GO:GO:0008026 EMBL:AACQ01000038 EMBL:AACQ01000037 eggNOG:COG0513
KO:K12614 InterPro:IPR014014 PROSITE:PS51195 RefSeq:XP_718704.1
RefSeq:XP_718788.1 ProteinModelPortal:Q5AAW3 SMR:Q5AAW3
GeneID:3639490 GeneID:3639628 KEGG:cal:CaO19.13577
KEGG:cal:CaO19.6197 Uniprot:Q5AAW3
Length = 549
Score = 262 (97.3 bits), Expect = 1.9e-36, Sum P(2) = 1.9e-36
Identities = 58/145 (40%), Positives = 84/145 (57%)
Query: 61 LNKGF-KEQIYDVYRYLPPATQVDWLTEKMREANFTVSSMHGDMPQKERDGIMKEFRSGT 119
LN F K QI + +V+ L +K+ E ++ H MPQ+ R+ + EFR G
Sbjct: 258 LNTLFSKLQINQSIIFCNSTNRVELLAKKITELGYSCYYSHAKMPQQARNKVFHEFRQGK 317
Query: 120 SRVLITTDVWARGIDVQQVSLVINYDLPNNRELYIHRIGRSGRFGRKGVAISFVKSDDIR 179
R L+ +D+ RGID+Q V++VIN+D P E Y+HRIGRSGRFG G+AI+ + +D
Sbjct: 318 VRNLVCSDLLTRGIDIQAVNVVINFDFPKTAETYLHRIGRSGRFGHLGLAINLMSWNDRY 377
Query: 180 ILRDIEQYYSTQIDEMPMNGKRSLH 204
L IEQ T+I +P +SL+
Sbjct: 378 SLYKIEQELGTEIKPIPATIDKSLY 402
Score = 161 (61.7 bits), Expect = 1.9e-36, Sum P(2) = 1.9e-36
Identities = 31/81 (38%), Positives = 48/81 (59%)
Query: 1 MNVQCHACIGGTNLSEDLRKLDYGQHVVSGTPGRVFDMIRRRVLRTRNIKMLVLDEADEM 60
+ QC GGT+L +D+ +L H++ GTPGRV D+ R+V+ + V+DEAD+M
Sbjct: 125 VGTQCMVTTGGTSLRDDIVRLHDPVHILVGTPGRVLDLAARKVVDLSECPLFVMDEADKM 184
Query: 61 LNKGFKEQIYDVYRYLPPATQ 81
L++ FK I + + PP Q
Sbjct: 185 LSREFKGIIEQILEFFPPNRQ 205
>UNIPROTKB|Q5AAW3 [details] [associations]
symbol:DHH1 "ATP-dependent RNA helicase DHH1"
species:237561 "Candida albicans SC5314" [GO:0010494 "cytoplasmic
stress granule" evidence=IDA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 CGD:CAL0006152 GO:GO:0005524
GO:GO:0006417 GO:GO:0006397 GO:GO:0003723 GO:GO:0000932
GO:GO:0051028 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0010494 GO:GO:0008026 EMBL:AACQ01000038 EMBL:AACQ01000037
eggNOG:COG0513 KO:K12614 InterPro:IPR014014 PROSITE:PS51195
RefSeq:XP_718704.1 RefSeq:XP_718788.1 ProteinModelPortal:Q5AAW3
SMR:Q5AAW3 GeneID:3639490 GeneID:3639628 KEGG:cal:CaO19.13577
KEGG:cal:CaO19.6197 Uniprot:Q5AAW3
Length = 549
Score = 262 (97.3 bits), Expect = 1.9e-36, Sum P(2) = 1.9e-36
Identities = 58/145 (40%), Positives = 84/145 (57%)
Query: 61 LNKGF-KEQIYDVYRYLPPATQVDWLTEKMREANFTVSSMHGDMPQKERDGIMKEFRSGT 119
LN F K QI + +V+ L +K+ E ++ H MPQ+ R+ + EFR G
Sbjct: 258 LNTLFSKLQINQSIIFCNSTNRVELLAKKITELGYSCYYSHAKMPQQARNKVFHEFRQGK 317
Query: 120 SRVLITTDVWARGIDVQQVSLVINYDLPNNRELYIHRIGRSGRFGRKGVAISFVKSDDIR 179
R L+ +D+ RGID+Q V++VIN+D P E Y+HRIGRSGRFG G+AI+ + +D
Sbjct: 318 VRNLVCSDLLTRGIDIQAVNVVINFDFPKTAETYLHRIGRSGRFGHLGLAINLMSWNDRY 377
Query: 180 ILRDIEQYYSTQIDEMPMNGKRSLH 204
L IEQ T+I +P +SL+
Sbjct: 378 SLYKIEQELGTEIKPIPATIDKSLY 402
Score = 161 (61.7 bits), Expect = 1.9e-36, Sum P(2) = 1.9e-36
Identities = 31/81 (38%), Positives = 48/81 (59%)
Query: 1 MNVQCHACIGGTNLSEDLRKLDYGQHVVSGTPGRVFDMIRRRVLRTRNIKMLVLDEADEM 60
+ QC GGT+L +D+ +L H++ GTPGRV D+ R+V+ + V+DEAD+M
Sbjct: 125 VGTQCMVTTGGTSLRDDIVRLHDPVHILVGTPGRVLDLAARKVVDLSECPLFVMDEADKM 184
Query: 61 LNKGFKEQIYDVYRYLPPATQ 81
L++ FK I + + PP Q
Sbjct: 185 LSREFKGIIEQILEFFPPNRQ 205
>TAIR|locus:2087832 [details] [associations]
symbol:PMH1 "putative mitochondrial RNA helicase 1"
species:3702 "Arabidopsis thaliana" [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=ISM] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA;ISS] [GO:0003677 "DNA binding" evidence=IDA]
[GO:0003723 "RNA binding" evidence=IDA] [GO:0009409 "response to
cold" evidence=IEP] [GO:0009414 "response to water deprivation"
evidence=IMP] [GO:0009651 "response to salt stress" evidence=IMP]
[GO:0043234 "protein complex" evidence=IDA] InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 EMBL:CP002686
GenomeReviews:BA000014_GR GO:GO:0043234 GO:GO:0003677 GO:GO:0009651
GO:GO:0009409 GO:GO:0009414 GO:GO:0003723 EMBL:AB022215
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
HOGENOM:HOG000268800 ProtClustDB:CLSN2684125 EMBL:AY091091
EMBL:AJ010461 IPI:IPI00517476 PIR:T51341 RefSeq:NP_188870.1
UniGene:At.25190 ProteinModelPortal:Q9LUW6 SMR:Q9LUW6 IntAct:Q9LUW6
STRING:Q9LUW6 PaxDb:Q9LUW6 PRIDE:Q9LUW6 EnsemblPlants:AT3G22310.1
GeneID:821800 KEGG:ath:AT3G22310 GeneFarm:922 TAIR:At3g22310
InParanoid:Q9LUW6 OMA:VSQGRQV PhylomeDB:Q9LUW6
Genevestigator:Q9LUW6 GermOnline:AT3G22310 Uniprot:Q9LUW6
Length = 610
Score = 238 (88.8 bits), Expect = 1.1e-35, Sum P(2) = 1.1e-35
Identities = 44/104 (42%), Positives = 68/104 (65%)
Query: 93 NFTVSSMHGDMPQKERDGIMKEFRSGTSRVLITTDVWARGIDVQQVSLVINYDLPNNREL 152
++ ++HGD+ Q +R+ + FR G +L+ TDV ARG+DV V LVI+Y+LPNN E
Sbjct: 384 SYKCEALHGDISQAQRERTLAGFRDGNFSILVATDVAARGLDVPNVDLVIHYELPNNTET 443
Query: 153 YIHRIGRSGRFGRKGVAISFVKSDDIRILRDIEQYYSTQIDEMP 196
++HR GR+GR G+KG AI D R ++ IE+ ++ +E+P
Sbjct: 444 FVHRTGRTGRAGKKGSAILIHGQDQTRAVKMIEKEVGSRFNELP 487
Score = 181 (68.8 bits), Expect = 1.1e-35, Sum P(2) = 1.1e-35
Identities = 44/116 (37%), Positives = 64/116 (55%)
Query: 8 CI-GGTNLSEDLRKLDYGQHVVSGTPGRVFDMIRRRVLRTRNIKMLVLDEADEMLNKGFK 66
C+ GGT + + +R+L+YG V GTPGR+ D+++R L ++ +VLDEAD+ML GF
Sbjct: 221 CLYGGTPIGQQMRELNYGIDVAVGTPGRIIDLMKRGALNLSEVQFVVLDEADQMLQVGFA 280
Query: 67 EQIYDVYRYLPP--------ATQVDW---LTEKMREANFTVSSMHGDMPQKERDGI 111
E + + + LP AT W LT+K T+ + GD QK DGI
Sbjct: 281 EDVEIILQKLPAKRQSMMFSATMPSWIRSLTKKYLNNPLTIDLV-GDSDQKLADGI 335
>TAIR|locus:2098886 [details] [associations]
symbol:AT3G61240 species:3702 "Arabidopsis thaliana"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=ISM] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA;ISS] [GO:0005829
"cytosol" evidence=RCA] [GO:0009165 "nucleotide biosynthetic
process" evidence=RCA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 EMBL:CP002686
GenomeReviews:BA000014_GR GO:GO:0006417 GO:GO:0006397 GO:GO:0003723
EMBL:AL137898 GO:GO:0000932 GO:GO:0051028 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513
HOGENOM:HOG000268797 KO:K12614 InterPro:IPR014014 PROSITE:PS51195
EMBL:AJ010464 EMBL:AY120712 EMBL:BT000038 IPI:IPI00548726
PIR:T47916 PIR:T51743 RefSeq:NP_191683.1 RefSeq:NP_974472.1
UniGene:At.20236 ProteinModelPortal:Q9M2E0 SMR:Q9M2E0 STRING:Q9M2E0
PaxDb:Q9M2E0 PRIDE:Q9M2E0 EnsemblPlants:AT3G61240.1
EnsemblPlants:AT3G61240.2 GeneID:825296 KEGG:ath:AT3G61240
GeneFarm:928 TAIR:At3g61240 InParanoid:Q9M2E0 OMA:PLAMDQR
PhylomeDB:Q9M2E0 ProtClustDB:CLSN2683443 Genevestigator:Q9M2E0
GermOnline:AT3G61240 Uniprot:Q9M2E0
Length = 498
Score = 257 (95.5 bits), Expect = 1.6e-35, Sum P(2) = 1.6e-35
Identities = 54/145 (37%), Positives = 85/145 (58%)
Query: 61 LNKGF-KEQIYDVYRYLPPATQVDWLTEKMREANFTVSSMHGDMPQKERDGIMKEFRSGT 119
LN F K QI + +V+ L +K+ E ++ +H M Q R+ + EFR+G
Sbjct: 352 LNTLFSKLQINQSIIFCNSVNRVELLAKKITELGYSCFYIHAKMVQDHRNRVFHEFRNGA 411
Query: 120 SRVLITTDVWARGIDVQQVSLVINYDLPNNRELYIHRIGRSGRFGRKGVAISFVKSDDIR 179
R L+ TD++ RGID+Q V++VIN+D P E Y+HR+GRSGRFG G+A++ V +D
Sbjct: 412 CRNLVCTDLFTRGIDIQAVNVVINFDFPRTSESYLHRVGRSGRFGHLGLAVNLVTYEDRF 471
Query: 180 ILRDIEQYYSTQIDEMPMNGKRSLH 204
+ EQ T+I +P N ++++
Sbjct: 472 KMYQTEQELGTEIKPIPSNIDQAIY 496
Score = 155 (59.6 bits), Expect = 1.6e-35, Sum P(2) = 1.6e-35
Identities = 28/81 (34%), Positives = 52/81 (64%)
Query: 1 MNVQCHACIGGTNLSEDLRKLDYGQHVVSGTPGRVFDMIRRRVLRTRNIKMLVLDEADEM 60
+N+Q GGT+L +D+ +L H++ GTPGR+ D+ ++ V ++ MLV+DEAD++
Sbjct: 219 LNIQVMVTTGGTSLRDDIMRLHQPVHLLVGTPGRILDLTKKGVCVLKDCAMLVMDEADKL 278
Query: 61 LNKGFKEQIYDVYRYLPPATQ 81
L+ F+ + ++ ++LP Q
Sbjct: 279 LSAEFQPSLEELIQFLPQNRQ 299
>POMBASE|SPAC17G6.14c [details] [associations]
symbol:uap56 "ATP-dependent RNA helicase Uap56"
species:4896 "Schizosaccharomyces pombe" [GO:0000346 "transcription
export complex" evidence=ISO] [GO:0003723 "RNA binding"
evidence=IEA] [GO:0004004 "ATP-dependent RNA helicase activity"
evidence=IGI] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005681 "spliceosomal complex" evidence=ISO]
[GO:0006406 "mRNA export from nucleus" evidence=ISO] [GO:0008380
"RNA splicing" evidence=IEA] InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 PomBase:SPAC17G6.14c GO:GO:0005524 EMBL:CU329670
GO:GO:0008380 GenomeReviews:CU329670_GR GO:GO:0006397 GO:GO:0005681
GO:GO:0003723 GO:GO:0006406 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0004004 eggNOG:COG0513 HOGENOM:HOG000268797
InterPro:IPR014014 PROSITE:PS51195 KO:K12812 GO:GO:0000346
OrthoDB:EOG4H49C6 EMBL:D89270 PIR:T37846 PIR:T43199
RefSeq:NP_594261.1 ProteinModelPortal:O13792 SMR:O13792
STRING:O13792 EnsemblFungi:SPAC17G6.14c.1 GeneID:2542433
KEGG:spo:SPAC17G6.14c OMA:DAVEFNQ NextBio:20803490 Uniprot:O13792
Length = 434
Score = 272 (100.8 bits), Expect = 2.1e-35, Sum P(2) = 2.1e-35
Identities = 50/123 (40%), Positives = 83/123 (67%)
Query: 75 YLPPATQVDWLTEKMREANFTVSSMHGDMPQKERDGIMKEFRSGTSRVLITTDVWARGID 134
++ ++ + L +RE NF +HG +PQ+ER K F+ R+ + TDV+ RGID
Sbjct: 301 FVKSVSRANELDRLLRECNFPSICIHGGLPQEERIKRYKAFKDFDKRICVATDVFGRGID 360
Query: 135 VQQVSLVINYDLPNNRELYIHRIGRSGRFGRKGVAISFVKSD-DIRILRDIEQYYSTQID 193
+++V++VINYD+P++ + Y+HR+GR+GRFG KG+AI+F S+ D +IL I++ + I
Sbjct: 361 IERVNIVINYDMPDSPDSYLHRVGRAGRFGTKGLAITFSSSEEDSQILDKIQERFEVNIT 420
Query: 194 EMP 196
E+P
Sbjct: 421 ELP 423
Score = 132 (51.5 bits), Expect = 2.1e-35, Sum P(2) = 2.1e-35
Identities = 27/77 (35%), Positives = 45/77 (58%)
Query: 10 GGTNLSEDLRKL-DYGQ--HVVSGTPGRVFDMIRRRVLRTRNIKMLVLDEADEMLNK-GF 65
GG N+ +D+ D + H+V TPGR+ ++R ++L+ ++K VLDE D++L
Sbjct: 156 GGINIKQDMEAFKDKSKSPHIVVATPGRLNALVREKILKVNSVKHFVLDECDKLLESVDM 215
Query: 66 KEQIYDVYRYLPPATQV 82
+ I +V+R PP QV
Sbjct: 216 RRDIQEVFRATPPQKQV 232
>UNIPROTKB|Q65N62 [details] [associations]
symbol:cshA "DEAD-box ATP-dependent RNA helicase CshA"
species:279010 "Bacillus licheniformis DSM 13 = ATCC 14580"
[GO:0003723 "RNA binding" evidence=ISS] [GO:0004004 "ATP-dependent
RNA helicase activity" evidence=ISS] [GO:0005524 "ATP binding"
evidence=ISS] [GO:0043590 "bacterial nucleoid" evidence=ISS]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0005737 GO:GO:0003723
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0004004
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195 GO:GO:0043590
HOGENOM:HOG000268810 OMA:IIDHINR HSSP:Q58083 EMBL:AE017333
EMBL:CP000002 RefSeq:YP_006711973.1 RefSeq:YP_077785.1
ProteinModelPortal:Q65N62 STRING:Q65N62 DNASU:3098967
EnsemblBacteria:EBBACT00000055567 EnsemblBacteria:EBBACT00000059427
GeneID:3030407 GeneID:3098967 GenomeReviews:AE017333_GR
GenomeReviews:CP000002_GR KEGG:bld:BLi00546 KEGG:bli:BL02197
PATRIC:18946609 ProtClustDB:CLSK886742
BioCyc:BLIC279010:GJ2P-538-MONOMER Uniprot:Q65N62
Length = 487
Score = 246 (91.7 bits), Expect = 4.4e-35, Sum P(2) = 4.4e-35
Identities = 47/115 (40%), Positives = 75/115 (65%)
Query: 81 QVDWLTEKMREANFTVSSMHGDMPQKERDGIMKEFRSGTSRVLITTDVWARGIDVQQVSL 140
+VD LTE + +T +HGD+ Q +R +++F+ G VL+ TDV ARG+D+ V+
Sbjct: 253 RVDELTEALNLRGYTAEGIHGDLTQAKRMVALRKFKQGAIEVLVATDVAARGLDISGVTH 312
Query: 141 VINYDLPNNRELYIHRIGRSGRFGRKGVAISFVKSDDIRILRDIEQYYSTQIDEM 195
V N+D+P + E Y+HRIGR+GR G+ G+A++F+ + +LR IEQ ++D M
Sbjct: 313 VYNFDVPQDPESYVHRIGRTGRAGKTGMAMTFITPREKDMLRAIEQTTKRKMDRM 367
Score = 162 (62.1 bits), Expect = 4.4e-35, Sum P(2) = 4.4e-35
Identities = 31/72 (43%), Positives = 43/72 (59%)
Query: 10 GGTNLSEDLRKLDYGQHVVSGTPGRVFDMIRRRVLRTRNIKMLVLDEADEMLNKGFKEQI 69
GG ++ +R L H++ GTPGR+ D I RR +R + + +VLDEADEMLN GF E I
Sbjct: 107 GGQDIGRQIRALKKNPHIIVGTPGRLLDHINRRTMRLQTVNTVVLDEADEMLNMGFIEDI 166
Query: 70 YDVYRYLPPATQ 81
+ +P Q
Sbjct: 167 ESILSNVPAEHQ 178
>UNIPROTKB|A4RBS3 [details] [associations]
symbol:SUB2 "ATP-dependent RNA helicase SUB2"
species:242507 "Magnaporthe oryzae 70-15" [GO:0005575
"cellular_component" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270
Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490
GO:GO:0005524 GO:GO:0008380 GO:GO:0006397 GO:GO:0005681
GO:GO:0003723 GO:GO:0051028 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 EMBL:CM000230 EMBL:CM001237 GO:GO:0008026
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195 KO:K12812
RefSeq:XP_003720935.1 ProteinModelPortal:A4RBS3 SMR:A4RBS3
STRING:A4RBS3 PRIDE:A4RBS3 EnsemblFungi:MGG_02806T0 GeneID:2682359
KEGG:mgr:MGG_02806 OrthoDB:EOG4H49C6 Uniprot:A4RBS3
Length = 436
Score = 274 (101.5 bits), Expect = 5.4e-35, Sum P(2) = 5.4e-35
Identities = 53/122 (43%), Positives = 82/122 (67%)
Query: 79 ATQVDWLTEKMREANFTVSSMHGDMPQKERDGIMKEFRSGTSRVLITTDVWARGIDVQQV 138
AT++D L +RE NF ++H + Q+ER KEF+ R+ + TDV+ RGID++++
Sbjct: 309 ATELDKL---LRECNFPSIAVHSGVSQEERIRRYKEFKEFNKRICVATDVFGRGIDIERI 365
Query: 139 SLVINYDLPNNRELYIHRIGRSGRFGRKGVAISFVKSD-DIRILRDIEQYYSTQIDEMPM 197
+L INYD+P + + Y+HR+GR+GRFG KG+A+SFV +D D +L IE+ + I E P
Sbjct: 366 NLAINYDMPADADSYLHRVGRAGRFGTKGLAVSFVTNDQDKEVLTAIEKRFEVPIPEFPK 425
Query: 198 NG 199
+G
Sbjct: 426 DG 427
Score = 126 (49.4 bits), Expect = 5.4e-35, Sum P(2) = 5.4e-35
Identities = 25/77 (32%), Positives = 47/77 (61%)
Query: 10 GGTNLSED---LRKLDYGQHVVSGTPGRVFDMIRRRVLRTRNIKMLVLDEADEMLNK-GF 65
GGT + +D L+ + H++ GTPGR+ ++R + LR ++++ VLDE D+ML++
Sbjct: 157 GGTPIQKDAELLKNKETHPHIIVGTPGRLNALVRDKFLRLSSVRIFVLDECDKMLDQIDM 216
Query: 66 KEQIYDVYRYLPPATQV 82
+ + +++R P QV
Sbjct: 217 RRDVQEIFRATPQQKQV 233
>SGD|S000005572 [details] [associations]
symbol:DBP5 "Cytoplasmic ATP-dependent RNA helicase of the
DEAD-box family" species:4932 "Saccharomyces cerevisiae"
[GO:0044614 "nuclear pore cytoplasmic filaments" evidence=IDA]
[GO:0005934 "cellular bud tip" evidence=IDA] [GO:0005643 "nuclear
pore" evidence=IEA;IPI] [GO:0005737 "cytoplasm" evidence=IEA;IDA]
[GO:0031965 "nuclear membrane" evidence=IEA] [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0008186
"RNA-dependent ATPase activity" evidence=IDA] [GO:0006406 "mRNA
export from nucleus" evidence=IGI;IMP] [GO:0003724 "RNA helicase
activity" evidence=ISS;IDA] [GO:0005844 "polysome" evidence=IDA]
[GO:0006415 "translational termination" evidence=IGI;IPI]
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0003723 "RNA
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA;IDA]
[GO:0006810 "transport" evidence=IEA] [GO:0015031 "protein
transport" evidence=IEA] [GO:0016020 "membrane" evidence=IEA]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0051028 "mRNA
transport" evidence=IEA] [GO:0000822 "inositol hexakisphosphate
binding" evidence=IDA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 SGD:S000005572 GO:GO:0005524
GO:GO:0005737 EMBL:BK006948 GO:GO:0005934 GO:GO:0015031
GO:GO:0031965 GO:GO:0003723 GO:GO:0006406 GO:GO:0005844
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 KO:K01529
GO:GO:0008026 eggNOG:COG0513 HOGENOM:HOG000268797 GO:GO:0003724
InterPro:IPR014014 PROSITE:PS51195 OMA:PQAICLA OrthoDB:EOG4B2X5R
EMBL:U28135 EMBL:Z74954 EMBL:Z74955 PIR:S66920 RefSeq:NP_014689.1
PDB:2KBE PDB:2KBF PDB:3GFP PDB:3PEU PDB:3PEV PDB:3PEW PDB:3PEY
PDB:3RRM PDB:3RRN PDBsum:2KBE PDBsum:2KBF PDBsum:3GFP PDBsum:3PEU
PDBsum:3PEV PDBsum:3PEW PDBsum:3PEY PDBsum:3RRM PDBsum:3RRN
ProteinModelPortal:P20449 SMR:P20449 DIP:DIP-2352N IntAct:P20449
MINT:MINT-488024 STRING:P20449 PaxDb:P20449 PeptideAtlas:P20449
EnsemblFungi:YOR046C GeneID:854211 KEGG:sce:YOR046C CYGD:YOR046c
GeneTree:ENSGT00530000063236 EvolutionaryTrace:P20449
NextBio:976065 Genevestigator:P20449 GermOnline:YOR046C
GO:GO:0044614 GO:GO:0008186 GO:GO:0006415 Uniprot:P20449
Length = 482
Score = 270 (100.1 bits), Expect = 6.7e-35, Sum P(2) = 6.7e-35
Identities = 57/108 (52%), Positives = 76/108 (70%)
Query: 88 KMREANFTVSSMHGDMPQKERDGIMKEFRSGTSRVLITTDVWARGIDVQQVSLVINYDLP 147
K++ VS +HGD+ +ERD ++ +FR G S+VLITT+V ARGID+ VS+V+NYDLP
Sbjct: 349 KLKSEGHEVSILHGDLQTQERDRLIDDFREGRSKVLITTNVLARGIDIPTVSMVVNYDLP 408
Query: 148 N--NREL----YIHRIGRSGRFGRKGVAISFVKS-DDIRILRDIEQYY 188
N + YIHRIGR+GRFGRKGVAISFV + IL I++Y+
Sbjct: 409 TLANGQADPATYIHRIGRTGRFGRKGVAISFVHDKNSFNILSAIQKYF 456
Score = 134 (52.2 bits), Expect = 6.7e-35, Sum P(2) = 6.7e-35
Identities = 27/57 (47%), Positives = 41/57 (71%)
Query: 27 VVSGTPGRVFDMIRRRVLRTRNIKMLVLDEADEMLNK-GFKEQIYDVYRYLPPATQV 82
V+ GTPG V D++RR++++ + IK+ VLDEAD ML++ G +Q V R+LP TQ+
Sbjct: 211 VIVGTPGTVLDLMRRKLMQLQKIKIFVLDEADNMLDQQGLGDQCIRVKRFLPKDTQL 267
>UNIPROTKB|Q3AFI3 [details] [associations]
symbol:CHY_0229 "ATP-dependent RNA helicase, DEAD box
family" species:246194 "Carboxydothermus hydrogenoformans Z-2901"
[GO:0008150 "biological_process" evidence=ND] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
EMBL:CP000141 GenomeReviews:CP000141_GR GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
HOGENOM:HOG000268810 KO:K05592 RefSeq:YP_359101.1
ProteinModelPortal:Q3AFI3 STRING:Q3AFI3 GeneID:3727044
KEGG:chy:CHY_0229 PATRIC:21273641 OMA:YAAKGLH
BioCyc:CHYD246194:GJCN-230-MONOMER Uniprot:Q3AFI3
Length = 430
Score = 256 (95.2 bits), Expect = 1.4e-34, Sum P(2) = 1.4e-34
Identities = 47/106 (44%), Positives = 73/106 (68%)
Query: 81 QVDWLTEKMREANFTVSSMHGDMPQKERDGIMKEFRSGTSRVLITTDVWARGIDVQQVSL 140
+VD + E++ + +HGDM Q+ER +K F++G + +L+ TDV ARG+D+ VS
Sbjct: 251 RVDEVVEQLNFRGYAAKGLHGDMSQRERTQTIKSFKAGKTELLVATDVAARGLDIPDVSH 310
Query: 141 VINYDLPNNRELYIHRIGRSGRFGRKGVAISFVKSDDIRILRDIEQ 186
VIN+D+P N E YIHRIGR+GR GR+G AI+ + + ++L+ IE+
Sbjct: 311 VINFDIPQNPESYIHRIGRTGRAGREGKAITLINYRERKLLKAIEE 356
Score = 142 (55.0 bits), Expect = 1.4e-34, Sum P(2) = 1.4e-34
Identities = 29/69 (42%), Positives = 41/69 (59%)
Query: 1 MNVQCHACIGGTNLSEDLRKLDYGQHVVSGTPGRVFDMIRRRVLRTRNIKMLVLDEADEM 60
+ V+ A GG + +R L G V+ GTPGR+ D I R+ IK+++LDEADEM
Sbjct: 96 LKVRALAVYGGQAIERQIRGLRQGVEVIVGTPGRILDHIGRKTFPAAEIKIVILDEADEM 155
Query: 61 LNKGFKEQI 69
L+ GF + I
Sbjct: 156 LDMGFIDDI 164
>TIGR_CMR|CHY_0229 [details] [associations]
symbol:CHY_0229 "ATP-dependent RNA helicase, DEAD box
family" species:246194 "Carboxydothermus hydrogenoformans Z-2901"
[GO:0004004 "ATP-dependent RNA helicase activity" evidence=ISS]
[GO:0008150 "biological_process" evidence=ND] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
EMBL:CP000141 GenomeReviews:CP000141_GR GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
HOGENOM:HOG000268810 KO:K05592 RefSeq:YP_359101.1
ProteinModelPortal:Q3AFI3 STRING:Q3AFI3 GeneID:3727044
KEGG:chy:CHY_0229 PATRIC:21273641 OMA:YAAKGLH
BioCyc:CHYD246194:GJCN-230-MONOMER Uniprot:Q3AFI3
Length = 430
Score = 256 (95.2 bits), Expect = 1.4e-34, Sum P(2) = 1.4e-34
Identities = 47/106 (44%), Positives = 73/106 (68%)
Query: 81 QVDWLTEKMREANFTVSSMHGDMPQKERDGIMKEFRSGTSRVLITTDVWARGIDVQQVSL 140
+VD + E++ + +HGDM Q+ER +K F++G + +L+ TDV ARG+D+ VS
Sbjct: 251 RVDEVVEQLNFRGYAAKGLHGDMSQRERTQTIKSFKAGKTELLVATDVAARGLDIPDVSH 310
Query: 141 VINYDLPNNRELYIHRIGRSGRFGRKGVAISFVKSDDIRILRDIEQ 186
VIN+D+P N E YIHRIGR+GR GR+G AI+ + + ++L+ IE+
Sbjct: 311 VINFDIPQNPESYIHRIGRTGRAGREGKAITLINYRERKLLKAIEE 356
Score = 142 (55.0 bits), Expect = 1.4e-34, Sum P(2) = 1.4e-34
Identities = 29/69 (42%), Positives = 41/69 (59%)
Query: 1 MNVQCHACIGGTNLSEDLRKLDYGQHVVSGTPGRVFDMIRRRVLRTRNIKMLVLDEADEM 60
+ V+ A GG + +R L G V+ GTPGR+ D I R+ IK+++LDEADEM
Sbjct: 96 LKVRALAVYGGQAIERQIRGLRQGVEVIVGTPGRILDHIGRKTFPAAEIKIVILDEADEM 155
Query: 61 LNKGFKEQI 69
L+ GF + I
Sbjct: 156 LDMGFIDDI 164
>SGD|S000002242 [details] [associations]
symbol:SUB2 "Component of the TREX complex required for
nuclear mRNA export" species:4932 "Saccharomyces cerevisiae"
[GO:0006406 "mRNA export from nucleus" evidence=IMP;IDA;IPI]
[GO:0000346 "transcription export complex" evidence=IPI]
[GO:0005634 "nucleus" evidence=IEA;IDA] [GO:0005681 "spliceosomal
complex" evidence=IEA;TAS] [GO:0004004 "ATP-dependent RNA helicase
activity" evidence=IGI;ISA] [GO:0006283 "transcription-coupled
nucleotide-excision repair" evidence=IMP] [GO:0006368
"transcription elongation from RNA polymerase II promoter"
evidence=IMP] [GO:0000398 "mRNA splicing, via spliceosome"
evidence=IMP] [GO:0006348 "chromatin silencing at telomere"
evidence=IMP] [GO:0000781 "chromosome, telomeric region"
evidence=IPI] [GO:0051028 "mRNA transport" evidence=IEA]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0006397 "mRNA
processing" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] [GO:0008380 "RNA splicing"
evidence=IEA] [GO:0006810 "transport" evidence=IEA] [GO:0003723
"RNA binding" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0031124 "mRNA 3'-end processing" evidence=IMP]
[GO:0005737 "cytoplasm" evidence=IDA] InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 SGD:S000002242 GO:GO:0005524
EMBL:BK006938 GO:GO:0005681 GO:GO:0003723 GO:GO:0006348
GO:GO:0006368 GO:GO:0006406 GO:GO:0000398 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0000781 GO:GO:0004004
GO:GO:0006283 eggNOG:COG0513 HOGENOM:HOG000268797
InterPro:IPR014014 PROSITE:PS51195 GO:GO:0031124
GeneTree:ENSGT00660000095549 KO:K12812 GO:GO:0000346
OrthoDB:EOG4H49C6 EMBL:Z74132 EMBL:AY692907 PIR:S67620
RefSeq:NP_010199.1 ProteinModelPortal:Q07478 SMR:Q07478
DIP:DIP-5343N IntAct:Q07478 MINT:MINT-526164 STRING:Q07478
PaxDb:Q07478 PeptideAtlas:Q07478 EnsemblFungi:YDL084W GeneID:851475
KEGG:sce:YDL084W CYGD:YDL084w OMA:NNPLINC NextBio:968777
Genevestigator:Q07478 GermOnline:YDL084W Uniprot:Q07478
Length = 446
Score = 280 (103.6 bits), Expect = 1.9e-34, Sum P(2) = 1.9e-34
Identities = 52/126 (41%), Positives = 83/126 (65%)
Query: 75 YLPPATQVDWLTEKMREANFTVSSMHGDMPQKERDGIMKEFRSGTSRVLITTDVWARGID 134
++ T+ + LT+ + +NF ++HG M Q+ER K F+ R+ ++TDV+ RGID
Sbjct: 312 FVKSTTRANELTKLLNASNFPAITVHGHMKQEERIARYKAFKDFEKRICVSTDVFGRGID 371
Query: 135 VQQVSLVINYDLPNNRELYIHRIGRSGRFGRKGVAISFVKS-DDIRILRDIEQYYSTQID 193
+++++L INYDL N + Y+HR+GR+GRFG KG+AISFV S +D +L I++ + +I
Sbjct: 372 IERINLAINYDLTNEADQYLHRVGRAGRFGTKGLAISFVSSKEDEEVLAKIQERFDVKIA 431
Query: 194 EMPMNG 199
E P G
Sbjct: 432 EFPEEG 437
Score = 115 (45.5 bits), Expect = 1.9e-34, Sum P(2) = 1.9e-34
Identities = 24/77 (31%), Positives = 44/77 (57%)
Query: 10 GGTNLSED---LRKLDYGQHVVSGTPGRVFDMIRRRVLRTRNIKMLVLDEADEMLNK-GF 65
GGT +S+D L+ D H+V TPGR+ ++R + + ++K V+DE D++L +
Sbjct: 167 GGTPISKDAELLKNKDTAPHIVVATPGRLKALVREKYIDLSHVKNFVIDECDKVLEELDM 226
Query: 66 KEQIYDVYRYLPPATQV 82
+ + +++R P QV
Sbjct: 227 RRDVQEIFRATPRDKQV 243
>GENEDB_PFALCIPARUM|PFB0445c [details] [associations]
symbol:PFB0445c "helicase, putative"
species:5833 "Plasmodium falciparum" [GO:0004004 "ATP-dependent RNA
helicase activity" evidence=ISS] [GO:0005575 "cellular_component"
evidence=ND] [GO:0008150 "biological_process" evidence=ND]
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0004004
EMBL:AE001362 GenomeReviews:AE001362_GR HOGENOM:HOG000268797
InterPro:IPR014014 PROSITE:PS51195 HSSP:P10081 KO:K12812
ProtClustDB:CLSZ2429041 PIR:G71614 RefSeq:XP_001349607.1
ProteinModelPortal:Q9TY94 SMR:Q9TY94 EnsemblProtists:PFB0445c:mRNA
GeneID:812689 KEGG:pfa:PFB0445c EuPathDB:PlasmoDB:PF3D7_0209800
OMA:LECVINY Uniprot:Q9TY94
Length = 457
Score = 269 (99.8 bits), Expect = 2.3e-34, Sum P(2) = 2.3e-34
Identities = 48/123 (39%), Positives = 83/123 (67%)
Query: 75 YLPPATQVDWLTEKMREANFTVSSMHGDMPQKERDGIMKEFRSGTSRVLITTDVWARGID 134
++ T+ L + + E NF ++HG + Q+ER +F+ +R+L++TD++ RGID
Sbjct: 324 FVKSVTRAITLDKLLTECNFPSIAIHGGLEQQERIERYDKFKKFENRILVSTDLFGRGID 383
Query: 135 VQQVSLVINYDLPNNRELYIHRIGRSGRFGRKGVAISFVKS-DDIRILRDIEQYYSTQID 193
+++V++VINYD+P N + Y+HR+GR+GRFG KG+A++FV S +D L +++ + I
Sbjct: 384 IERVNIVINYDMPENSDSYLHRVGRAGRFGTKGLAVTFVSSQEDTLALNEVQTRFEVAIS 443
Query: 194 EMP 196
EMP
Sbjct: 444 EMP 446
Score = 128 (50.1 bits), Expect = 2.3e-34, Sum P(2) = 2.3e-34
Identities = 29/91 (31%), Positives = 49/91 (53%)
Query: 2 NVQCHACIGGTNLSEDLR--KLDYGQHVVSGTPGRVFDMIRRRVLRTRNIKMLVLDEADE 59
NV+C GG ++++ ++ K D H++ GTPGR+ +IR + L T I+ VLDE D+
Sbjct: 172 NVRCEVVYGGISMNKHIKLFKEDNIPHIIIGTPGRILALIREKYLITDKIQHFVLDECDK 231
Query: 60 MLNK-GFKEQIYDVYRYLPPATQVDWLTEKM 89
L K + + ++ P QV + + M
Sbjct: 232 CLEKLDMRSDVQKIFISTPLKKQVMFFSATM 262
>UNIPROTKB|Q9TY94 [details] [associations]
symbol:UAP56 "DEAD box helicase, UAP56" species:36329
"Plasmodium falciparum 3D7" [GO:0004004 "ATP-dependent RNA helicase
activity" evidence=ISS] [GO:0005575 "cellular_component"
evidence=ND] [GO:0008150 "biological_process" evidence=ND]
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0004004
EMBL:AE001362 GenomeReviews:AE001362_GR HOGENOM:HOG000268797
InterPro:IPR014014 PROSITE:PS51195 HSSP:P10081 KO:K12812
ProtClustDB:CLSZ2429041 PIR:G71614 RefSeq:XP_001349607.1
ProteinModelPortal:Q9TY94 SMR:Q9TY94 EnsemblProtists:PFB0445c:mRNA
GeneID:812689 KEGG:pfa:PFB0445c EuPathDB:PlasmoDB:PF3D7_0209800
OMA:LECVINY Uniprot:Q9TY94
Length = 457
Score = 269 (99.8 bits), Expect = 2.3e-34, Sum P(2) = 2.3e-34
Identities = 48/123 (39%), Positives = 83/123 (67%)
Query: 75 YLPPATQVDWLTEKMREANFTVSSMHGDMPQKERDGIMKEFRSGTSRVLITTDVWARGID 134
++ T+ L + + E NF ++HG + Q+ER +F+ +R+L++TD++ RGID
Sbjct: 324 FVKSVTRAITLDKLLTECNFPSIAIHGGLEQQERIERYDKFKKFENRILVSTDLFGRGID 383
Query: 135 VQQVSLVINYDLPNNRELYIHRIGRSGRFGRKGVAISFVKS-DDIRILRDIEQYYSTQID 193
+++V++VINYD+P N + Y+HR+GR+GRFG KG+A++FV S +D L +++ + I
Sbjct: 384 IERVNIVINYDMPENSDSYLHRVGRAGRFGTKGLAVTFVSSQEDTLALNEVQTRFEVAIS 443
Query: 194 EMP 196
EMP
Sbjct: 444 EMP 446
Score = 128 (50.1 bits), Expect = 2.3e-34, Sum P(2) = 2.3e-34
Identities = 29/91 (31%), Positives = 49/91 (53%)
Query: 2 NVQCHACIGGTNLSEDLR--KLDYGQHVVSGTPGRVFDMIRRRVLRTRNIKMLVLDEADE 59
NV+C GG ++++ ++ K D H++ GTPGR+ +IR + L T I+ VLDE D+
Sbjct: 172 NVRCEVVYGGISMNKHIKLFKEDNIPHIIIGTPGRILALIREKYLITDKIQHFVLDECDK 231
Query: 60 MLNK-GFKEQIYDVYRYLPPATQVDWLTEKM 89
L K + + ++ P QV + + M
Sbjct: 232 CLEKLDMRSDVQKIFISTPLKKQVMFFSATM 262
>FB|FBgn0263231 [details] [associations]
symbol:bel "belle" species:7227 "Drosophila melanogaster"
[GO:0007286 "spermatid development" evidence=IMP] [GO:0008026
"ATP-dependent helicase activity" evidence=ISS] [GO:0004004
"ATP-dependent RNA helicase activity" evidence=ISS;IMP] [GO:0005524
"ATP binding" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0043186 "P granule" evidence=IDA] [GO:0007283
"spermatogenesis" evidence=IMP] [GO:0002168 "instar larval
development" evidence=IMP] [GO:0048477 "oogenesis" evidence=IMP]
[GO:0016442 "RNA-induced silencing complex" evidence=IDA]
[GO:0016246 "RNA interference" evidence=IMP] [GO:0005811 "lipid
particle" evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA]
[GO:0005875 "microtubule associated complex" evidence=IDA]
[GO:0043025 "neuronal cell body" evidence=IDA] [GO:0010468
"regulation of gene expression" evidence=IMP] [GO:0000070 "mitotic
sister chromatid segregation" evidence=IMP] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 EMBL:AE014297
GO:GO:0005524 GO:GO:0005875 GO:GO:0016246 GO:GO:0007286
GO:GO:0005811 GO:GO:0043025 GO:GO:0048477 GO:GO:0003723
GO:GO:0000070 GO:GO:0016442 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0004004 GO:GO:0002168 eggNOG:COG0513
InterPro:IPR014014 PROSITE:PS51195 GO:GO:0043186
GeneTree:ENSGT00620000087942 KO:K11594 HSSP:P09052 EMBL:AY089613
RefSeq:NP_536783.1 UniGene:Dm.7823 ProteinModelPortal:Q9VHP0
SMR:Q9VHP0 IntAct:Q9VHP0 STRING:Q9VHP0 PaxDb:Q9VHP0 PRIDE:Q9VHP0
EnsemblMetazoa:FBtr0081888 GeneID:45826 KEGG:dme:Dmel_CG9748
UCSC:CG9748-RA CTD:100035747 FlyBase:FBgn0263231 InParanoid:Q9VHP0
OMA:TILWVYE OrthoDB:EOG4DNCKG PhylomeDB:Q9VHP0 GenomeRNAi:45826
NextBio:838377 Bgee:Q9VHP0 Uniprot:Q9VHP0
Length = 798
Score = 239 (89.2 bits), Expect = 2.5e-34, Sum P(2) = 2.5e-34
Identities = 50/114 (43%), Positives = 70/114 (61%)
Query: 83 DWLTEKMREANFTVSSMHGDMPQKERDGIMKEFRSGTSRVLITTDVWARGIDVQQVSLVI 142
D L E + + N V+S+HGD QKER+ ++ FRSG +L+ T V ARG+D+ V VI
Sbjct: 573 DSLEEFLYQCNHPVTSIHGDRTQKEREEALRCFRSGDCPILVATAVAARGLDIPHVKHVI 632
Query: 143 NYDLPNNRELYIHRIGRSGRFGRKGVAISFVKSDDIRILRDIEQYYSTQIDEMP 196
N+DLP++ E Y+HRIGR+GR G GVA SF + I D+ + E+P
Sbjct: 633 NFDLPSDVEEYVHRIGRTGRMGNLGVATSFFNEKNRNICSDLLELLIETKQEIP 686
Score = 171 (65.3 bits), Expect = 2.5e-34, Sum P(2) = 2.5e-34
Identities = 37/74 (50%), Positives = 47/74 (63%)
Query: 10 GGTNLSEDLRKLDYGQHVVSGTPGRVFDMIRRRVLRTRNIKMLVLDEADEMLNKGFKEQI 69
GG N SE +R+LD G H++ TPGR+ DMI R + NI+ LVLDEAD ML+ GF+ QI
Sbjct: 414 GGNNTSEQMRELDRGCHLIVATPGRLEDMITRGKVGLENIRFLVLDEADRMLDMGFEPQI 473
Query: 70 YDVYRYL--PPATQ 81
+ L PP Q
Sbjct: 474 RRIVEQLNMPPTGQ 487
>TIGR_CMR|SO_3783 [details] [associations]
symbol:SO_3783 "ATP-dependent RNA helicase, DEAD box
family" species:211586 "Shewanella oneidensis MR-1" [GO:0006139
"nucleobase-containing compound metabolic process" evidence=ISS]
[GO:0008026 "ATP-dependent helicase activity" evidence=ISS]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0003676 EMBL:AE014299
GenomeReviews:AE014299_GR InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
HSSP:Q58083 HOGENOM:HOG000268807 KO:K11927 OMA:HLIKQHN
RefSeq:NP_719320.1 ProteinModelPortal:Q8EAV8 GeneID:1171430
KEGG:son:SO_3783 PATRIC:23527244 ProtClustDB:CLSK2393932
Uniprot:Q8EAV8
Length = 535
Score = 265 (98.3 bits), Expect = 3.1e-34, Sum P(2) = 3.1e-34
Identities = 48/123 (39%), Positives = 81/123 (65%)
Query: 85 LTEKMREANFTVSSMHGDMPQKERDGIMKEFRSGTSRVLITTDVWARGIDVQQVSLVINY 144
L + + +A + +++HG+ Q R + +F+SG RVL+ TD+ ARG+D+ Q+ V+N+
Sbjct: 259 LAKSLIQAEISAAAIHGNKSQGARTKALADFKSGEVRVLVATDIAARGLDIDQLPQVVNF 318
Query: 145 DLPNNRELYIHRIGRSGRFGRKGVAISFVKSDDIRILRDIEQYYSTQIDEMPMNGKRSLH 204
DLPN E Y+HRIGR+GR G G A+S V S++I++L+DIE+ + ++ + G +H
Sbjct: 319 DLPNVPEDYVHRIGRTGRAGATGQAVSLVSSEEIKLLKDIERLINRVLERQEVEGFSPVH 378
Query: 205 SYP 207
+ P
Sbjct: 379 ALP 381
Score = 136 (52.9 bits), Expect = 3.1e-34, Sum P(2) = 3.1e-34
Identities = 26/72 (36%), Positives = 43/72 (59%)
Query: 10 GGTNLSEDLRKLDYGQHVVSGTPGRVFDMIRRRVLRTRNIKMLVLDEADEMLNKGFKEQI 69
GG ++ + KL +G V+ TPGR+ D++++ ++ +++LVLDEAD ML+ GF I
Sbjct: 109 GGVPINPQINKLRHGVDVLVATPGRLLDLVQQNAVKFNQLEILVLDEADRMLDMGFIRDI 168
Query: 70 YDVYRYLPPATQ 81
+ LP Q
Sbjct: 169 KKILALLPAKRQ 180
>TIGR_CMR|GSU_0914 [details] [associations]
symbol:GSU_0914 "ATP-dependent RNA helicase RhlE"
species:243231 "Geobacter sulfurreducens PCA" [GO:0008026
"ATP-dependent helicase activity" evidence=ISS] [GO:0008152
"metabolic process" evidence=ISS] InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0003676 EMBL:AE017180
GenomeReviews:AE017180_GR InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
HOGENOM:HOG000268807 KO:K11927 OMA:KHRAKRV RefSeq:NP_951968.1
ProteinModelPortal:Q74EP8 GeneID:2687174 KEGG:gsu:GSU0914
PATRIC:22024603 ProtClustDB:CLSK924451
BioCyc:GSUL243231:GH27-925-MONOMER Uniprot:Q74EP8
Length = 447
Score = 259 (96.2 bits), Expect = 5.0e-34, Sum P(2) = 5.0e-34
Identities = 51/115 (44%), Positives = 73/115 (63%)
Query: 85 LTEKMREANFTVSSMHGDMPQKERDGIMKEFRSGTSRVLITTDVWARGIDVQQVSLVINY 144
L E++ +A + +S+ G++ Q R + FR GT ++L+ TD+ ARGIDV QVS VINY
Sbjct: 255 LGEQLEKAGYRAASLQGNLSQNRRQAALDGFRDGTFQILVATDIAARGIDVSQVSHVINY 314
Query: 145 DLPNNRELYIHRIGRSGRFGRKGVAISFVKSDDIRILRDIEQYYSTQIDEMPMNG 199
D+P+ E YIHRIGR+GR R G A + V SDD ++R IE+ I+ + G
Sbjct: 315 DIPDTAEAYIHRIGRTGRAARSGDAFTLVTSDDGAMVRAIERSLGAPIERRTVQG 369
Score = 135 (52.6 bits), Expect = 5.0e-34, Sum P(2) = 5.0e-34
Identities = 28/72 (38%), Positives = 42/72 (58%)
Query: 10 GGTNLSEDLRKLDYGQHVVSGTPGRVFDMIRRRVLRTRNIKMLVLDEADEMLNKGFKEQI 69
GG ++ ++KL G VV PGR+ D I + + +++LVLDEAD+M + GF I
Sbjct: 106 GGVGVNPQVQKLKAGAEVVVACPGRLLDHIAQGTIDLSRLEVLVLDEADQMFDMGFLPDI 165
Query: 70 YDVYRYLPPATQ 81
V ++LPP Q
Sbjct: 166 RRVLKHLPPRRQ 177
>UNIPROTKB|Q5L3G9 [details] [associations]
symbol:cshA "DEAD-box ATP-dependent RNA helicase CshA"
species:235909 "Geobacillus kaustophilus HTA426" [GO:0003723 "RNA
binding" evidence=ISS] [GO:0004004 "ATP-dependent RNA helicase
activity" evidence=ISS] [GO:0005524 "ATP binding" evidence=ISS]
[GO:0043590 "bacterial nucleoid" evidence=ISS] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0005737 GO:GO:0003723 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0004004 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 GO:GO:0043590 HOGENOM:HOG000268810 KO:K05592
OMA:IIDHINR HSSP:Q58083 EMBL:BA000043 RefSeq:YP_146079.1
ProteinModelPortal:Q5L3G9 GeneID:3184893 GenomeReviews:BA000043_GR
KEGG:gka:GK0226 PATRIC:21961545 ProtClustDB:CLSK712472
BioCyc:GKAU235909:GJO7-260-MONOMER Uniprot:Q5L3G9
Length = 467
Score = 237 (88.5 bits), Expect = 5.6e-34, Sum P(2) = 5.6e-34
Identities = 44/115 (38%), Positives = 73/115 (63%)
Query: 81 QVDWLTEKMREANFTVSSMHGDMPQKERDGIMKEFRSGTSRVLITTDVWARGIDVQQVSL 140
+VD L E + + +HGD+ Q +R ++++F+ G +L+ TDV ARG+D+ V+
Sbjct: 252 RVDELAEALNLRGYAAEGIHGDLSQAKRLSVLRKFKEGAIEILVATDVAARGLDISGVTH 311
Query: 141 VINYDLPNNRELYIHRIGRSGRFGRKGVAISFVKSDDIRILRDIEQYYSTQIDEM 195
V N+D+P + E Y+HRIGR+GR G+ GVA++FV +I L IE+ +++ M
Sbjct: 312 VYNFDIPQDPESYVHRIGRTGRAGKTGVAMTFVTPREIGQLHHIERTTKRKMERM 366
Score = 160 (61.4 bits), Expect = 5.6e-34, Sum P(2) = 5.6e-34
Identities = 32/72 (44%), Positives = 43/72 (59%)
Query: 10 GGTNLSEDLRKLDYGQHVVSGTPGRVFDMIRRRVLRTRNIKMLVLDEADEMLNKGFKEQI 69
GG ++ +R L HV+ GTPGR+ D I R LR ++ +VLDEADEMLN GF E I
Sbjct: 106 GGQDIERQIRALKKHPHVIVGTPGRIIDHINRGTLRLEHVHTVVLDEADEMLNMGFIEDI 165
Query: 70 YDVYRYLPPATQ 81
+ ++P Q
Sbjct: 166 EAILSHVPAERQ 177
>ASPGD|ASPL0000006660 [details] [associations]
symbol:AN5931 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0005730 "nucleolus" evidence=IEA] [GO:0005829 "cytosol"
evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0005634
GO:GO:0005737 GO:GO:0000184 GO:GO:0003723 EMBL:BN001301
EMBL:AACD01000101 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0006364 GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 HOGENOM:HOG000268804 KO:K12823 RefSeq:XP_663535.1
ProteinModelPortal:Q5B0J9 STRING:Q5B0J9 PRIDE:Q5B0J9
EnsemblFungi:CADANIAT00007099 GeneID:2870997 KEGG:ani:AN5931.2
OMA:IDAMSGY OrthoDB:EOG47SWP6 Uniprot:Q5B0J9
Length = 563
Score = 269 (99.8 bits), Expect = 1.0e-33, Sum P(2) = 1.0e-33
Identities = 49/102 (48%), Positives = 73/102 (71%)
Query: 83 DWLTEKMREANFTVSSMHGDMPQKERDGIMKEFRSGTSRVLITTDVWARGIDVQQVSLVI 142
D +T +R+ + S+HGD Q+ERD ++ EF++G S +++ TDV +RGIDV+ ++ VI
Sbjct: 401 DEITRFLRQDGWPALSIHGDKQQQERDWVLNEFKTGKSPIMVATDVASRGIDVRDITHVI 460
Query: 143 NYDLPNNRELYIHRIGRSGRFGRKGVAISFVKSDDIRILRDI 184
NYD PNN E Y+HRIGR+GR G KG AI+F +D+ + RD+
Sbjct: 461 NYDYPNNSEDYVHRIGRTGRAGAKGTAITFFTTDNAKQARDL 502
Score = 128 (50.1 bits), Expect = 1.0e-33, Sum P(2) = 1.0e-33
Identities = 29/77 (37%), Positives = 39/77 (50%)
Query: 6 HACI-GGTNLSEDLRKLDYGQHVVSGTPGRVFDMIRRRVLRTRNIKMLVLDEADEMLNKG 64
+ C+ GG +R L G V TPGR+ DM+ R + LVLDEAD ML+ G
Sbjct: 244 NTCVYGGVPKGPQIRDLSRGVEVCIATPGRLIDMLEAGRTNLRRVTYLVLDEADRMLDMG 303
Query: 65 FKEQIYDVYRYLPPATQ 81
F+ QI + + P Q
Sbjct: 304 FEPQIRKIISQIRPDRQ 320
>UNIPROTKB|K9J6N8 [details] [associations]
symbol:DDX39B "Spliceosome RNA helicase DDX39B"
species:9615 "Canis lupus familiaris" [GO:0005524 "ATP binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS51194 SMART:SM00490 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GeneTree:ENSGT00660000095549 EMBL:AAEX03008212
Ensembl:ENSCAFT00000000797 Uniprot:K9J6N8
Length = 310
Score = 254 (94.5 bits), Expect = 1.5e-33, Sum P(2) = 1.5e-33
Identities = 43/113 (38%), Positives = 76/113 (67%)
Query: 85 LTEKMREANFTVSSMHGDMPQKERDGIMKEFRSGTSRVLITTDVWARGIDVQQVSLVINY 144
L + + E NF ++H MPQ+ER ++F+ R+L+ T+++ RG+D+++V++ NY
Sbjct: 185 LAQLLVEQNFPAIAIHRGMPQEERLSRYQQFKDFQRRILVATNLFGRGMDIERVNIAFNY 244
Query: 145 DLPNNRELYIHRIGRSGRFGRKGVAISFVKSD-DIRILRDIEQYYSTQIDEMP 196
D+P + + Y+HR+ R+GRFG KG+AI+FV + D +IL D++ + I E+P
Sbjct: 245 DMPEDSDTYLHRVARAGRFGTKGLAITFVSDENDAKILNDVQDRFEVNISELP 297
Score = 127 (49.8 bits), Expect = 1.5e-33, Sum P(2) = 1.5e-33
Identities = 27/83 (32%), Positives = 45/83 (54%)
Query: 2 NVQCHACIGGTNLSEDLRKLDYG-QHVVSGTPGRVFDMIRRRVLRTRNIKMLVLDEADEM 60
NV+ GG ++ +D L H+V GTPGR+ + R + L ++IK +LDE D+M
Sbjct: 24 NVKVAVFFGGLSIKKDEEVLKKNCPHIVVGTPGRILALARNKSLNLKHIKHFILDECDKM 83
Query: 61 LNK-GFKEQIYDVYRYLPPATQV 82
L + + + +++R P QV
Sbjct: 84 LEQLDMRRDVQEIFRMTPHEKQV 106
>UNIPROTKB|H0Y7G4 [details] [associations]
symbol:DDX39B "Spliceosome RNA helicase DDX39B"
species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
HGNC:HGNC:13917 ChiTaRS:DDX39B EMBL:CT009531
Ensembl:ENST00000420337 Ensembl:ENST00000426766
Ensembl:ENST00000448800 Uniprot:H0Y7G4
Length = 328
Score = 254 (94.5 bits), Expect = 1.5e-33, Sum P(2) = 1.5e-33
Identities = 43/113 (38%), Positives = 76/113 (67%)
Query: 85 LTEKMREANFTVSSMHGDMPQKERDGIMKEFRSGTSRVLITTDVWARGIDVQQVSLVINY 144
L + + E NF ++H MPQ+ER ++F+ R+L+ T+++ RG+D+++V++ NY
Sbjct: 203 LAQLLVEQNFPAIAIHRGMPQEERLSRYQQFKDFQRRILVATNLFGRGMDIERVNIAFNY 262
Query: 145 DLPNNRELYIHRIGRSGRFGRKGVAISFVKSD-DIRILRDIEQYYSTQIDEMP 196
D+P + + Y+HR+ R+GRFG KG+AI+FV + D +IL D++ + I E+P
Sbjct: 263 DMPEDSDTYLHRVARAGRFGTKGLAITFVSDENDAKILNDVQDRFEVNISELP 315
Score = 127 (49.8 bits), Expect = 1.5e-33, Sum P(2) = 1.5e-33
Identities = 27/83 (32%), Positives = 45/83 (54%)
Query: 2 NVQCHACIGGTNLSEDLRKLDYG-QHVVSGTPGRVFDMIRRRVLRTRNIKMLVLDEADEM 60
NV+ GG ++ +D L H+V GTPGR+ + R + L ++IK +LDE D+M
Sbjct: 42 NVKVAVFFGGLSIKKDEEVLKKNCPHIVVGTPGRILALARNKSLNLKHIKHFILDECDKM 101
Query: 61 LNK-GFKEQIYDVYRYLPPATQV 82
L + + + +++R P QV
Sbjct: 102 LEQLDMRRDVQEIFRMTPHEKQV 124
>UNIPROTKB|Q81JK1 [details] [associations]
symbol:BAS5307 "ATP-dependent RNA helicase, DEAD/DEAH box
family" species:1392 "Bacillus anthracis" [GO:0008150
"biological_process" evidence=ND] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
EMBL:AE016879 EMBL:AE017334 EMBL:AE017225 GenomeReviews:AE016879_GR
GenomeReviews:AE017225_GR GenomeReviews:AE017334_GR GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 HSSP:Q58083 HOGENOM:HOG000268809
InterPro:IPR005580 Pfam:PF03880 OMA:ENRFLEE RefSeq:NP_847849.1
RefSeq:YP_022388.1 RefSeq:YP_031544.1 ProteinModelPortal:Q81JK1
SMR:Q81JK1 IntAct:Q81JK1 DNASU:1085452
EnsemblBacteria:EBBACT00000008202 EnsemblBacteria:EBBACT00000014623
EnsemblBacteria:EBBACT00000021322 GeneID:1085452 GeneID:2819774
GeneID:2852974 KEGG:ban:BA_5703 KEGG:bar:GBAA_5703 KEGG:bat:BAS5307
ProtClustDB:CLSK883265 BioCyc:BANT260799:GJAJ-5380-MONOMER
BioCyc:BANT261594:GJ7F-5556-MONOMER Uniprot:Q81JK1
Length = 481
Score = 252 (93.8 bits), Expect = 1.7e-33, Sum P(2) = 1.7e-33
Identities = 47/106 (44%), Positives = 68/106 (64%)
Query: 82 VDWLTEKMREANFTVSSMHGDMPQKERDGIMKEFRSGTSRVLITTDVWARGIDVQQVSLV 141
VD + ++ N+ +HG M Q++R G+M +FR G R L+ TDV ARGID+ ++ V
Sbjct: 255 VDHVYRQLDRVNYPCDKIHGGMVQEDRFGVMDDFRKGKFRYLVATDVAARGIDIDNITHV 314
Query: 142 INYDLPNNRELYIHRIGRSGRFGRKGVAISFVKSDDIRILRDIEQY 187
INYD+P +E Y+HR GR+GR G G AI+F+ + R L +IE Y
Sbjct: 315 INYDIPLEKESYVHRTGRTGRAGNSGKAITFITPYEDRFLEEIEAY 360
Score = 140 (54.3 bits), Expect = 1.7e-33, Sum P(2) = 1.7e-33
Identities = 30/75 (40%), Positives = 42/75 (56%)
Query: 3 VQCHACIGGTNLSEDLRKLDYGQHVVSGTPGRVFDMIRRRVLRTRNIKMLVLDEADEMLN 62
++ A G + + +L H+V GTPGRV D I + L +K LV+DEADEMLN
Sbjct: 101 IKAAAIYGKSPFARQKLELKQKTHIVVGTPGRVLDHIEKGTLSLERLKYLVIDEADEMLN 160
Query: 63 KGFKEQIYDVYRYLP 77
GF +Q+ + LP
Sbjct: 161 MGFIDQVEAIIDELP 175
>TIGR_CMR|BA_5703 [details] [associations]
symbol:BA_5703 "ATP-dependent RNA helicase, DEAD/DEAH box
family" species:198094 "Bacillus anthracis str. Ames" [GO:0008026
"ATP-dependent helicase activity" evidence=ISS] [GO:0008150
"biological_process" evidence=ND] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
EMBL:AE016879 EMBL:AE017334 EMBL:AE017225 GenomeReviews:AE016879_GR
GenomeReviews:AE017225_GR GenomeReviews:AE017334_GR GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 HSSP:Q58083 HOGENOM:HOG000268809
InterPro:IPR005580 Pfam:PF03880 OMA:ENRFLEE RefSeq:NP_847849.1
RefSeq:YP_022388.1 RefSeq:YP_031544.1 ProteinModelPortal:Q81JK1
SMR:Q81JK1 IntAct:Q81JK1 DNASU:1085452
EnsemblBacteria:EBBACT00000008202 EnsemblBacteria:EBBACT00000014623
EnsemblBacteria:EBBACT00000021322 GeneID:1085452 GeneID:2819774
GeneID:2852974 KEGG:ban:BA_5703 KEGG:bar:GBAA_5703 KEGG:bat:BAS5307
ProtClustDB:CLSK883265 BioCyc:BANT260799:GJAJ-5380-MONOMER
BioCyc:BANT261594:GJ7F-5556-MONOMER Uniprot:Q81JK1
Length = 481
Score = 252 (93.8 bits), Expect = 1.7e-33, Sum P(2) = 1.7e-33
Identities = 47/106 (44%), Positives = 68/106 (64%)
Query: 82 VDWLTEKMREANFTVSSMHGDMPQKERDGIMKEFRSGTSRVLITTDVWARGIDVQQVSLV 141
VD + ++ N+ +HG M Q++R G+M +FR G R L+ TDV ARGID+ ++ V
Sbjct: 255 VDHVYRQLDRVNYPCDKIHGGMVQEDRFGVMDDFRKGKFRYLVATDVAARGIDIDNITHV 314
Query: 142 INYDLPNNRELYIHRIGRSGRFGRKGVAISFVKSDDIRILRDIEQY 187
INYD+P +E Y+HR GR+GR G G AI+F+ + R L +IE Y
Sbjct: 315 INYDIPLEKESYVHRTGRTGRAGNSGKAITFITPYEDRFLEEIEAY 360
Score = 140 (54.3 bits), Expect = 1.7e-33, Sum P(2) = 1.7e-33
Identities = 30/75 (40%), Positives = 42/75 (56%)
Query: 3 VQCHACIGGTNLSEDLRKLDYGQHVVSGTPGRVFDMIRRRVLRTRNIKMLVLDEADEMLN 62
++ A G + + +L H+V GTPGRV D I + L +K LV+DEADEMLN
Sbjct: 101 IKAAAIYGKSPFARQKLELKQKTHIVVGTPGRVLDHIEKGTLSLERLKYLVIDEADEMLN 160
Query: 63 KGFKEQIYDVYRYLP 77
GF +Q+ + LP
Sbjct: 161 MGFIDQVEAIIDELP 175
>UNIPROTKB|P96614 [details] [associations]
symbol:cshA "DEAD-box ATP-dependent RNA helicase CshA"
species:224308 "Bacillus subtilis subsp. subtilis str. 168"
[GO:0003723 "RNA binding" evidence=IDA] [GO:0004004 "ATP-dependent
RNA helicase activity" evidence=IDA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0005524 "ATP binding" evidence=IDA] [GO:0009409
"response to cold" evidence=IGI] [GO:0010501 "RNA secondary
structure unwinding" evidence=IDA] [GO:0043590 "bacterial nucleoid"
evidence=IDA] [GO:0005840 "ribosome" evidence=IDA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0005737 GO:GO:0009409
GO:GO:0003723 EMBL:AL009126 GenomeReviews:AL009126_GR
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0004004
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195 GO:GO:0043590
HOGENOM:HOG000268810 HSSP:Q58083 ProtClustDB:CLSK886742
EMBL:AB001488 PIR:D69772 RefSeq:NP_388339.1
ProteinModelPortal:P96614 SMR:P96614 IntAct:P96614 DNASU:938170
EnsemblBacteria:EBBACT00000000739 GeneID:938170 KEGG:bsu:BSU04580
PATRIC:18972500 GenoList:BSU04580 BioCyc:BSUB:BSU04580-MONOMER
GO:GO:0010501 Uniprot:P96614
Length = 494
Score = 237 (88.5 bits), Expect = 2.6e-33, Sum P(2) = 2.6e-33
Identities = 45/115 (39%), Positives = 73/115 (63%)
Query: 81 QVDWLTEKMREANFTVSSMHGDMPQKERDGIMKEFRSGTSRVLITTDVWARGIDVQQVSL 140
+VD L E + + +HGD+ Q +R +++F+ G VL+ TDV ARG+D+ V+
Sbjct: 253 RVDELAEALNLRGYAAEGIHGDLTQAKRMVALRKFKEGAIEVLVATDVAARGLDISGVTH 312
Query: 141 VINYDLPNNRELYIHRIGRSGRFGRKGVAISFVKSDDIRILRDIEQYYSTQIDEM 195
V N+D+P + E Y+HRIGR+GR G+ G+A++F+ + +LR IEQ ++D M
Sbjct: 313 VYNFDVPQDPESYVHRIGRTGRAGKTGMAMTFITPREKSMLRAIEQTTKRKMDRM 367
Score = 155 (59.6 bits), Expect = 2.6e-33, Sum P(2) = 2.6e-33
Identities = 29/72 (40%), Positives = 43/72 (59%)
Query: 10 GGTNLSEDLRKLDYGQHVVSGTPGRVFDMIRRRVLRTRNIKMLVLDEADEMLNKGFKEQI 69
GG ++ +R L +++ GTPGR+ D I RR +R N+ +V+DEADEMLN GF + I
Sbjct: 107 GGQDIGRQIRALKKNPNIIVGTPGRLLDHINRRTIRLNNVNTVVMDEADEMLNMGFIDDI 166
Query: 70 YDVYRYLPPATQ 81
+ +P Q
Sbjct: 167 ESILSNVPSEHQ 178
>TAIR|locus:2147987 [details] [associations]
symbol:UAP56a "homolog of human UAP56 a" species:3702
"Arabidopsis thaliana" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=ISM;IDA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA;ISS] [GO:0005730 "nucleolus" evidence=IDA] [GO:0046686
"response to cadmium ion" evidence=IEP] [GO:0005829 "cytosol"
evidence=RCA] [GO:0009506 "plasmodesma" evidence=IDA]
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0009506
GO:GO:0005524 EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0046686
GO:GO:0005730 GO:GO:0003723 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 EMBL:AL360314 eggNOG:COG0513
InterPro:IPR014014 PROSITE:PS51195 EMBL:AJ010466 EMBL:AY052303
EMBL:BT001052 EMBL:AK221273 EMBL:AK221708 EMBL:AK226428
IPI:IPI00760330 IPI:IPI00760336 IPI:IPI00760344 PIR:T51343
RefSeq:NP_568244.2 RefSeq:NP_568245.1 UniGene:At.49007
UniGene:At.73904 ProteinModelPortal:Q56XG6 SMR:Q56XG6 IntAct:Q56XG6
STRING:Q56XG6 PRIDE:Q56XG6 EnsemblPlants:AT5G11170.1
EnsemblPlants:AT5G11200.1 GeneID:830986 GeneID:830990
KEGG:ath:AT5G11170 KEGG:ath:AT5G11200 GeneFarm:932 TAIR:At5g11170
InParanoid:Q56XG6 PhylomeDB:Q56XG6 ProtClustDB:CLSN2689601
Genevestigator:Q56XG6 Uniprot:Q56XG6
Length = 427
Score = 264 (98.0 bits), Expect = 3.8e-33, Sum P(2) = 3.8e-33
Identities = 48/113 (42%), Positives = 76/113 (67%)
Query: 85 LTEKMREANFTVSSMHGDMPQKERDGIMKEFRSGTSRVLITTDVWARGIDVQQVSLVINY 144
L + + E NF +H M Q+ER K F+ G R+L+ TD+ RGID+++V++VINY
Sbjct: 304 LNKLLVECNFPSICIHSGMSQEERLTRYKSFKEGHKRILVATDLVGRGIDIERVNIVINY 363
Query: 145 DLPNNRELYIHRIGRSGRFGRKGVAISFVKS-DDIRILRDIEQYYSTQIDEMP 196
D+P++ + Y+HR+GR+GRFG KG+AI+FV S D +L +++ + I E+P
Sbjct: 364 DMPDSADTYLHRVGRAGRFGTKGLAITFVASASDSEVLNQVQERFEVDIKELP 416
Score = 119 (46.9 bits), Expect = 3.8e-33, Sum P(2) = 3.8e-33
Identities = 26/76 (34%), Positives = 43/76 (56%)
Query: 10 GGTNLS--EDLRKLDYGQHVVSGTPGRVFDMIRRRVLRTRNIKMLVLDEADEMLNK-GFK 66
GG N+ +DL K + H+V GTPGRV + R + L +N++ +LDE D+ML +
Sbjct: 151 GGVNIKIHKDLLKNEC-PHIVVGTPGRVLALAREKDLSLKNVRHFILDECDKMLESLDMR 209
Query: 67 EQIYDVYRYLPPATQV 82
+ ++++ P QV
Sbjct: 210 RDVQEIFKMTPHDKQV 225
>UNIPROTKB|B4DP52 [details] [associations]
symbol:DDX39B "Spliceosome RNA helicase DDX39B"
species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 EMBL:CH471081
GO:GO:0003676 EMBL:AL662847 EMBL:AL662801 EMBL:CR753892
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
HOGENOM:HOG000268797 HOVERGEN:HBG107334 EMBL:BX001040 EMBL:BX248516
EMBL:BX927320 EMBL:CR753820 EMBL:CR753864 UniGene:Hs.254042
UniGene:Hs.730849 HGNC:HGNC:13917 ChiTaRS:DDX39B EMBL:CR942185
EMBL:AK298194 IPI:IPI00792043 SMR:B4DP52 STRING:B4DP52
Ensembl:ENST00000415382 Ensembl:ENST00000548499
Ensembl:ENST00000548770 Ensembl:ENST00000549326
Ensembl:ENST00000549433 Ensembl:ENST00000551056
Ensembl:ENST00000552079 UCSC:uc011dnn.2 Uniprot:B4DP52
Length = 350
Score = 254 (94.5 bits), Expect = 6.2e-33, Sum P(2) = 6.2e-33
Identities = 43/113 (38%), Positives = 76/113 (67%)
Query: 85 LTEKMREANFTVSSMHGDMPQKERDGIMKEFRSGTSRVLITTDVWARGIDVQQVSLVINY 144
L + + E NF ++H MPQ+ER ++F+ R+L+ T+++ RG+D+++V++ NY
Sbjct: 225 LAQLLVEQNFPAIAIHRGMPQEERLSRYQQFKDFQRRILVATNLFGRGMDIERVNIAFNY 284
Query: 145 DLPNNRELYIHRIGRSGRFGRKGVAISFVKSD-DIRILRDIEQYYSTQIDEMP 196
D+P + + Y+HR+ R+GRFG KG+AI+FV + D +IL D++ + I E+P
Sbjct: 285 DMPEDSDTYLHRVARAGRFGTKGLAITFVSDENDAKILNDVQDRFEVNISELP 337
Score = 121 (47.7 bits), Expect = 6.2e-33, Sum P(2) = 6.2e-33
Identities = 25/75 (33%), Positives = 42/75 (56%)
Query: 10 GGTNLSEDLRKLDYG-QHVVSGTPGRVFDMIRRRVLRTRNIKMLVLDEADEMLNK-GFKE 67
GG ++ +D L H+V GTPGR+ + R + L ++IK +LDE D+ML + +
Sbjct: 72 GGLSIKKDEEVLKKNCPHIVVGTPGRILALARNKSLNLKHIKHFILDECDKMLEQLDMRR 131
Query: 68 QIYDVYRYLPPATQV 82
+ +++R P QV
Sbjct: 132 DVQEIFRMTPHEKQV 146
>ZFIN|ZDB-GENE-030131-4275 [details] [associations]
symbol:ddx39aa "DEAD (Asp-Glu-Ala-Asp) box
polypeptide 39Aa" species:7955 "Danio rerio" [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0005575
"cellular_component" evidence=ND] [GO:0016787 "hydrolase activity"
evidence=IEA] InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270
Pfam:PF00271 PROSITE:PS51194 SMART:SM00490
ZFIN:ZDB-GENE-030131-4275 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 HOVERGEN:HBG107334 EMBL:BC071505
IPI:IPI00510085 UniGene:Dr.1111 ProteinModelPortal:Q6IQA5
SMR:Q6IQA5 STRING:Q6IQA5 PRIDE:Q6IQA5 InParanoid:Q6IQA5
ArrayExpress:Q6IQA5 Bgee:Q6IQA5 Uniprot:Q6IQA5
Length = 427
Score = 244 (91.0 bits), Expect = 7.3e-33, Sum P(2) = 7.3e-33
Identities = 41/113 (36%), Positives = 76/113 (67%)
Query: 85 LTEKMREANFTVSSMHGDMPQKERDGIMKEFRSGTSRVLITTDVWARGIDVQQVSLVINY 144
L++ + E NF ++H M Q+ER ++F+ R+L+ T+++ RG+D+++V++V NY
Sbjct: 302 LSQLLVEQNFPAIAIHRGMTQEERLSRYQQFKDFQRRILVATNLFGRGMDIERVNIVFNY 361
Query: 145 DLPNNRELYIHRIGRSGRFGRKGVAISFVKSD-DIRILRDIEQYYSTQIDEMP 196
D+P + + Y+HR+ R+GRFG KG+A+ FV + D +IL D++ + + E+P
Sbjct: 362 DMPEDSDTYLHRVARAGRFGTKGLAVIFVSDETDAKILNDVQDRFEVNVAELP 414
Score = 139 (54.0 bits), Expect = 7.3e-33, Sum P(2) = 7.3e-33
Identities = 29/82 (35%), Positives = 46/82 (56%)
Query: 2 NVQCHACIGGTNLSEDLRKLDYG-QHVVSGTPGRVFDMIRRRVLRTRNIKMLVLDEADEM 60
+V+C A GG ++ +D L H+V GTPGR+ + R + L +N+K VLDE D+M
Sbjct: 141 SVKCAAFFGGMSIKKDEDVLKKNCPHIVVGTPGRILALSRNKTLTLKNVKHFVLDECDKM 200
Query: 61 LNK-GFKEQIYDVYRYLPPATQ 81
L + + + D++R P Q
Sbjct: 201 LEQLDMRRDVQDIFRLTPHEKQ 222
>UNIPROTKB|J9NSS1 [details] [associations]
symbol:DDX25 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
GeneTree:ENSGT00530000063236 CTD:29118 EMBL:AAEX03003382
RefSeq:XP_536532.3 Ensembl:ENSCAFT00000048680 GeneID:479396
KEGG:cfa:479396 Uniprot:J9NSS1
Length = 369
Score = 263 (97.6 bits), Expect = 7.9e-33, Sum P(2) = 7.9e-33
Identities = 50/118 (42%), Positives = 82/118 (69%)
Query: 84 WLTEKMREANFTVSSMHGDMPQKERDGIMKEFRSGTSRVLITTDVWARGIDVQQVSLVIN 143
WLT +M + VS + G++ +R I++ FR G +VLITT+V ARGIDV+QV++V+N
Sbjct: 239 WLTVEMMQDGHQVSLLSGELTVDQRASIIQRFRDGKEKVLITTNVCARGIDVKQVTIVVN 298
Query: 144 YDLPNNR------ELYIHRIGRSGRFGRKGVAISFVKSDDIRILRDIEQYYSTQIDEM 195
+DLP N+ E Y+HRIGR+GRFG+KG+A + ++ D + +L I+ ++++ I ++
Sbjct: 299 FDLPVNQAEEPDYETYLHRIGRTGRFGKKGLAFNMIEVDKLPLLMKIQDHFNSSIKQL 356
Score = 111 (44.1 bits), Expect = 7.9e-33, Sum P(2) = 7.9e-33
Identities = 28/84 (33%), Positives = 47/84 (55%)
Query: 1 MNVQCHACIGGTNLSEDLRKLDYGQHVVSGTPGRVFDM-IRRRVLRTRNIKMLVLDEADE 59
++VQ I G ++ R D + ++ GTPG V D +R+++ I++ VLDEAD
Sbjct: 81 VDVQVMYAIRGNHIP---RGTDVTKQIIIGTPGTVLDWCFKRKLIDLTKIRVFVLDEADV 137
Query: 60 MLN-KGFKEQIYDVYRYLPPATQV 82
M++ +GF +Q + R LP Q+
Sbjct: 138 MIDTQGFSDQSIRIQRALPSECQM 161
>UNIPROTKB|F1S758 [details] [associations]
symbol:LOC100523329 "Uncharacterized protein" species:9823
"Sus scrofa" [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014
PROSITE:PS51195 GeneTree:ENSGT00530000063236 OMA:WHFAERI
EMBL:CU928873 Ensembl:ENSSSCT00000016589 Uniprot:F1S758
Length = 379
Score = 263 (97.6 bits), Expect = 7.9e-33, Sum P(2) = 7.9e-33
Identities = 50/118 (42%), Positives = 82/118 (69%)
Query: 84 WLTEKMREANFTVSSMHGDMPQKERDGIMKEFRSGTSRVLITTDVWARGIDVQQVSLVIN 143
WLT +M + VS + G++ +R I++ FR G +VLITT+V ARGIDV+QV++V+N
Sbjct: 249 WLTVEMMQDGHQVSLLSGELTVDQRAAIIQRFRDGKEKVLITTNVCARGIDVKQVTIVVN 308
Query: 144 YDLPNNR------ELYIHRIGRSGRFGRKGVAISFVKSDDIRILRDIEQYYSTQIDEM 195
+DLP N+ E Y+HRIGR+GRFG+KG+A + ++ D + +L I+ ++++ I ++
Sbjct: 309 FDLPVNQAEEPDYETYLHRIGRTGRFGKKGLAFNMIEVDKLPLLMKIQDHFNSNIKQL 366
Score = 111 (44.1 bits), Expect = 7.9e-33, Sum P(2) = 7.9e-33
Identities = 28/84 (33%), Positives = 46/84 (54%)
Query: 1 MNVQCHACIGGTNLSEDLRKLDYGQHVVSGTPGRVFDM-IRRRVLRTRNIKMLVLDEADE 59
++VQ I G + R D + ++ GTPG V D +R+++ I++ VLDEAD
Sbjct: 91 VDVQVMYAIRGNRIP---RGTDITKQIIIGTPGTVLDWCFKRKLIDLTKIRVFVLDEADV 147
Query: 60 MLN-KGFKEQIYDVYRYLPPATQV 82
M++ +GF +Q + R LP Q+
Sbjct: 148 MIDTQGFSDQSIRIQRALPSGCQM 171
>UNIPROTKB|Q5WR10 [details] [associations]
symbol:DDX39B "Spliceosome RNA helicase DDX39B"
species:9615 "Canis lupus familiaris" [GO:0016607 "nuclear speck"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0046784
"intronless viral mRNA export from host nucleus" evidence=IEA]
[GO:0043008 "ATP-dependent protein binding" evidence=IEA]
[GO:0030621 "U4 snRNA binding" evidence=IEA] [GO:0017070 "U6 snRNA
binding" evidence=IEA] [GO:0010501 "RNA secondary structure
unwinding" evidence=IEA] [GO:0005688 "U6 snRNP" evidence=IEA]
[GO:0005687 "U4 snRNP" evidence=IEA] [GO:0005681 "spliceosomal
complex" evidence=IEA] [GO:0004004 "ATP-dependent RNA helicase
activity" evidence=IEA] [GO:0000346 "transcription export complex"
evidence=IEA] [GO:0000245 "spliceosomal complex assembly"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0005737
GO:GO:0016607 GO:GO:0005681 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0000245 GO:GO:0004004 eggNOG:COG0513
InterPro:IPR014014 PROSITE:PS51195 GO:GO:0010501 GO:GO:0017070
HOVERGEN:HBG107334 OrthoDB:EOG4XSKPX GeneTree:ENSGT00660000095549
CTD:7919 KO:K12812 OMA:NAENPAI GO:GO:0000346 GO:GO:0005687
GO:GO:0005688 GO:GO:0030621 GO:GO:0046784 EMBL:AY423389
RefSeq:NP_001014399.1 UniGene:Cfa.10131 ProteinModelPortal:Q5WR10
SMR:Q5WR10 Ensembl:ENSCAFT00000036511 GeneID:474839 KEGG:cfa:474839
InParanoid:Q5WR10 NextBio:20850784 Uniprot:Q5WR10
Length = 428
Score = 254 (94.5 bits), Expect = 8.9e-33, Sum P(2) = 8.9e-33
Identities = 43/113 (38%), Positives = 76/113 (67%)
Query: 85 LTEKMREANFTVSSMHGDMPQKERDGIMKEFRSGTSRVLITTDVWARGIDVQQVSLVINY 144
L + + E NF ++H MPQ+ER ++F+ R+L+ T+++ RG+D+++V++ NY
Sbjct: 303 LAQLLVEQNFPAIAIHRGMPQEERLSRYQQFKDFQRRILVATNLFGRGMDIERVNIAFNY 362
Query: 145 DLPNNRELYIHRIGRSGRFGRKGVAISFVKSD-DIRILRDIEQYYSTQIDEMP 196
D+P + + Y+HR+ R+GRFG KG+AI+FV + D +IL D++ + I E+P
Sbjct: 363 DMPEDSDTYLHRVARAGRFGTKGLAITFVSDENDAKILNDVQDRFEVNISELP 415
Score = 127 (49.8 bits), Expect = 8.9e-33, Sum P(2) = 8.9e-33
Identities = 27/83 (32%), Positives = 45/83 (54%)
Query: 2 NVQCHACIGGTNLSEDLRKLDYG-QHVVSGTPGRVFDMIRRRVLRTRNIKMLVLDEADEM 60
NV+ GG ++ +D L H+V GTPGR+ + R + L ++IK +LDE D+M
Sbjct: 142 NVKVAVFFGGLSIKKDEEVLKKNCPHIVVGTPGRILALARNKSLNLKHIKHFILDECDKM 201
Query: 61 LNK-GFKEQIYDVYRYLPPATQV 82
L + + + +++R P QV
Sbjct: 202 LEQLDMRRDVQEIFRMTPHEKQV 224
>UNIPROTKB|Q13838 [details] [associations]
symbol:DDX39B "Spliceosome RNA helicase DDX39B"
species:9606 "Homo sapiens" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0016607 "nuclear speck" evidence=IEA] [GO:0005515 "protein
binding" evidence=IPI] [GO:0006406 "mRNA export from nucleus"
evidence=IGI;IDA] [GO:0000398 "mRNA splicing, via spliceosome"
evidence=IGI] [GO:0000346 "transcription export complex"
evidence=IDA] [GO:0046784 "intronless viral mRNA export from host
nucleus" evidence=IDA] [GO:0008186 "RNA-dependent ATPase activity"
evidence=IDA] [GO:0004004 "ATP-dependent RNA helicase activity"
evidence=IDA] [GO:0005634 "nucleus" evidence=IDA] [GO:0005737
"cytoplasm" evidence=IDA] [GO:0008380 "RNA splicing" evidence=IDA]
[GO:0000245 "spliceosomal complex assembly" evidence=IDA]
[GO:0005681 "spliceosomal complex" evidence=IDA] [GO:0043008
"ATP-dependent protein binding" evidence=IDA] [GO:0005687 "U4
snRNP" evidence=IDA] [GO:0005688 "U6 snRNP" evidence=IDA]
[GO:0030621 "U4 snRNA binding" evidence=IDA] [GO:0017070 "U6 snRNA
binding" evidence=IDA] [GO:0010501 "RNA secondary structure
unwinding" evidence=IDA] InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS51194 SMART:SM00490
GO:GO:0005524 GO:GO:0005737 EMBL:BA000025 EMBL:CH471081
GO:GO:0016607 GO:GO:0005681 TCDB:3.A.18.1.1 EMBL:AL662847
EMBL:AL662801 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
CleanEx:HS_BAT1 GO:GO:0000245 GO:GO:0004004 eggNOG:COG0513
InterPro:IPR014014 PROSITE:PS51195 GO:GO:0010501 GO:GO:0017070
HOVERGEN:HBG107334 OrthoDB:EOG4XSKPX CTD:7919 KO:K12812
GO:GO:0000346 GO:GO:0030621 GO:GO:0046784 EMBL:Z37166 EMBL:BT009909
EMBL:AK222912 EMBL:AB088115 EMBL:AB103621 EMBL:AB202112
EMBL:BX001040 EMBL:BX248516 EMBL:BX927320 EMBL:CR753820
EMBL:CR753864 EMBL:BC000361 EMBL:BC013006 EMBL:AF029061
EMBL:AF029062 IPI:IPI00641829 IPI:IPI00848161 PIR:I37201
RefSeq:NP_004631.1 RefSeq:NP_542165.1 UniGene:Hs.254042
UniGene:Hs.730849 PDB:1T5I PDB:1T6N PDB:1XTI PDB:1XTJ PDB:1XTK
PDBsum:1T5I PDBsum:1T6N PDBsum:1XTI PDBsum:1XTJ PDBsum:1XTK
ProteinModelPortal:Q13838 SMR:Q13838 IntAct:Q13838
MINT:MINT-1032422 STRING:Q13838 PhosphoSite:Q13838 DMDM:2500529
PaxDb:Q13838 PRIDE:Q13838 DNASU:7919 Ensembl:ENST00000383508
Ensembl:ENST00000396172 Ensembl:ENST00000400295
Ensembl:ENST00000400296 Ensembl:ENST00000412106
Ensembl:ENST00000412330 Ensembl:ENST00000413678
Ensembl:ENST00000414440 Ensembl:ENST00000415689
Ensembl:ENST00000416863 Ensembl:ENST00000430784
Ensembl:ENST00000431360 Ensembl:ENST00000441425
Ensembl:ENST00000445218 Ensembl:ENST00000448296
Ensembl:ENST00000453138 Ensembl:ENST00000456476
Ensembl:ENST00000456666 Ensembl:ENST00000458640 GeneID:7919
KEGG:hsa:7919 UCSC:uc003ntt.3 GeneCards:GC06M031500 HGNC:HGNC:13917
HPA:CAB034012 MIM:142560 neXtProt:NX_Q13838 PharmGKB:PA25262
InParanoid:Q13838 PhylomeDB:Q13838 ChiTaRS:DDX39B
EvolutionaryTrace:Q13838 GenomeRNAi:7919 NextBio:30405
ArrayExpress:Q13838 Bgee:Q13838 Genevestigator:Q13838
GermOnline:ENSG00000198563 GO:GO:0043008 Uniprot:Q13838
Length = 428
Score = 254 (94.5 bits), Expect = 8.9e-33, Sum P(2) = 8.9e-33
Identities = 43/113 (38%), Positives = 76/113 (67%)
Query: 85 LTEKMREANFTVSSMHGDMPQKERDGIMKEFRSGTSRVLITTDVWARGIDVQQVSLVINY 144
L + + E NF ++H MPQ+ER ++F+ R+L+ T+++ RG+D+++V++ NY
Sbjct: 303 LAQLLVEQNFPAIAIHRGMPQEERLSRYQQFKDFQRRILVATNLFGRGMDIERVNIAFNY 362
Query: 145 DLPNNRELYIHRIGRSGRFGRKGVAISFVKSD-DIRILRDIEQYYSTQIDEMP 196
D+P + + Y+HR+ R+GRFG KG+AI+FV + D +IL D++ + I E+P
Sbjct: 363 DMPEDSDTYLHRVARAGRFGTKGLAITFVSDENDAKILNDVQDRFEVNISELP 415
Score = 127 (49.8 bits), Expect = 8.9e-33, Sum P(2) = 8.9e-33
Identities = 27/83 (32%), Positives = 45/83 (54%)
Query: 2 NVQCHACIGGTNLSEDLRKLDYG-QHVVSGTPGRVFDMIRRRVLRTRNIKMLVLDEADEM 60
NV+ GG ++ +D L H+V GTPGR+ + R + L ++IK +LDE D+M
Sbjct: 142 NVKVAVFFGGLSIKKDEEVLKKNCPHIVVGTPGRILALARNKSLNLKHIKHFILDECDKM 201
Query: 61 LNK-GFKEQIYDVYRYLPPATQV 82
L + + + +++R P QV
Sbjct: 202 LEQLDMRRDVQEIFRMTPHEKQV 224
>UNIPROTKB|Q29024 [details] [associations]
symbol:DDX39B "Spliceosome RNA helicase DDX39B"
species:9823 "Sus scrofa" [GO:0016607 "nuclear speck" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0046784 "intronless viral
mRNA export from host nucleus" evidence=IEA] [GO:0043008
"ATP-dependent protein binding" evidence=IEA] [GO:0030621 "U4 snRNA
binding" evidence=IEA] [GO:0017070 "U6 snRNA binding" evidence=IEA]
[GO:0010501 "RNA secondary structure unwinding" evidence=IEA]
[GO:0005688 "U6 snRNP" evidence=IEA] [GO:0005687 "U4 snRNP"
evidence=IEA] [GO:0005681 "spliceosomal complex" evidence=IEA]
[GO:0004004 "ATP-dependent RNA helicase activity" evidence=IEA]
[GO:0000346 "transcription export complex" evidence=IEA]
[GO:0000245 "spliceosomal complex assembly" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0005737 GO:GO:0016607
GO:GO:0005681 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0000245 GO:GO:0004004 EMBL:AJ251914 eggNOG:COG0513
InterPro:IPR014014 PROSITE:PS51195 GO:GO:0010501 GO:GO:0017070
HOVERGEN:HBG107334 OrthoDB:EOG4XSKPX GeneTree:ENSGT00660000095549
CTD:7919 KO:K12812 OMA:NAENPAI GO:GO:0000346 GO:GO:0005687
GO:GO:0005688 GO:GO:0030621 GO:GO:0046784 EMBL:Z34846 PIR:I47126
RefSeq:NP_001005157.1 UniGene:Ssc.11719 ProteinModelPortal:Q29024
SMR:Q29024 STRING:Q29024 PRIDE:Q29024 Ensembl:ENSSSCT00000001529
GeneID:448813 KEGG:ssc:448813 ArrayExpress:Q29024 Uniprot:Q29024
Length = 428
Score = 254 (94.5 bits), Expect = 8.9e-33, Sum P(2) = 8.9e-33
Identities = 43/113 (38%), Positives = 76/113 (67%)
Query: 85 LTEKMREANFTVSSMHGDMPQKERDGIMKEFRSGTSRVLITTDVWARGIDVQQVSLVINY 144
L + + E NF ++H MPQ+ER ++F+ R+L+ T+++ RG+D+++V++ NY
Sbjct: 303 LAQLLVEQNFPAIAIHRGMPQEERLSRYQQFKDFQRRILVATNLFGRGMDIERVNIAFNY 362
Query: 145 DLPNNRELYIHRIGRSGRFGRKGVAISFVKSD-DIRILRDIEQYYSTQIDEMP 196
D+P + + Y+HR+ R+GRFG KG+AI+FV + D +IL D++ + I E+P
Sbjct: 363 DMPEDSDTYLHRVARAGRFGTKGLAITFVSDENDAKILNDVQDRFEVNISELP 415
Score = 127 (49.8 bits), Expect = 8.9e-33, Sum P(2) = 8.9e-33
Identities = 27/83 (32%), Positives = 45/83 (54%)
Query: 2 NVQCHACIGGTNLSEDLRKLDYG-QHVVSGTPGRVFDMIRRRVLRTRNIKMLVLDEADEM 60
NV+ GG ++ +D L H+V GTPGR+ + R + L ++IK +LDE D+M
Sbjct: 142 NVKVAVFFGGLSIKKDEEVLKKNCPHIVVGTPGRILALARNKSLNLKHIKHFILDECDKM 201
Query: 61 LNK-GFKEQIYDVYRYLPPATQV 82
L + + + +++R P QV
Sbjct: 202 LEQLDMRRDVQEIFRMTPHEKQV 224
>MGI|MGI:99240 [details] [associations]
symbol:Ddx39b "DEAD (Asp-Glu-Ala-Asp) box polypeptide 39B"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0000245 "spliceosomal complex assembly"
evidence=ISO] [GO:0000346 "transcription export complex"
evidence=ISO] [GO:0000398 "mRNA splicing, via spliceosome"
evidence=ISO] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0003723 "RNA binding" evidence=IEA] [GO:0004004 "ATP-dependent
RNA helicase activity" evidence=ISO] [GO:0004386 "helicase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISO] [GO:0005681 "spliceosomal
complex" evidence=ISO] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0006397 "mRNA processing" evidence=IEA] [GO:0006406 "mRNA
export from nucleus" evidence=ISO] [GO:0006810 "transport"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0008186 "RNA-dependent ATPase activity"
evidence=ISO] [GO:0008380 "RNA splicing" evidence=ISO] [GO:0010501
"RNA secondary structure unwinding" evidence=ISO] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0017070 "U6 snRNA binding"
evidence=ISO] [GO:0030621 "U4 snRNA binding" evidence=ISO]
[GO:0043008 "ATP-dependent protein binding" evidence=ISO]
[GO:0046784 "intronless viral mRNA export from host nucleus"
evidence=ISO] [GO:0051028 "mRNA transport" evidence=IEA]
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS51194 SMART:SM00490 MGI:MGI:99240 GO:GO:0005524
GO:GO:0005737 GO:GO:0016607 GO:GO:0005681 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0000245 GO:GO:0004004
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195 GO:GO:0010501
GO:GO:0017070 HOVERGEN:HBG107334 OrthoDB:EOG4XSKPX
GeneTree:ENSGT00660000095549 CTD:7919 KO:K12812 OMA:NAENPAI
GO:GO:0000346 GO:GO:0005687 GO:GO:0005688 GO:GO:0030621
GO:GO:0046784 EMBL:AF118128 EMBL:AY255786 EMBL:AY255787
EMBL:AC007080 EMBL:AK088867 EMBL:AK051034 EMBL:BC011067
EMBL:BC024859 IPI:IPI00409462 RefSeq:NP_001239386.1
RefSeq:NP_062667.1 UniGene:Mm.439827 ProteinModelPortal:Q9Z1N5
SMR:Q9Z1N5 IntAct:Q9Z1N5 STRING:Q9Z1N5 PhosphoSite:Q9Z1N5
PaxDb:Q9Z1N5 PRIDE:Q9Z1N5 Ensembl:ENSMUST00000068056
Ensembl:ENSMUST00000172549 Ensembl:ENSMUST00000173731 GeneID:53817
KEGG:mmu:53817 InParanoid:Q9Z1N5 NextBio:310679 Bgee:Q9Z1N5
CleanEx:MM_BAT1A Genevestigator:Q9Z1N5 Uniprot:Q9Z1N5
Length = 428
Score = 254 (94.5 bits), Expect = 8.9e-33, Sum P(2) = 8.9e-33
Identities = 43/113 (38%), Positives = 76/113 (67%)
Query: 85 LTEKMREANFTVSSMHGDMPQKERDGIMKEFRSGTSRVLITTDVWARGIDVQQVSLVINY 144
L + + E NF ++H MPQ+ER ++F+ R+L+ T+++ RG+D+++V++ NY
Sbjct: 303 LAQLLVEQNFPAIAIHRGMPQEERLSRYQQFKDFQRRILVATNLFGRGMDIERVNIAFNY 362
Query: 145 DLPNNRELYIHRIGRSGRFGRKGVAISFVKSD-DIRILRDIEQYYSTQIDEMP 196
D+P + + Y+HR+ R+GRFG KG+AI+FV + D +IL D++ + I E+P
Sbjct: 363 DMPEDSDTYLHRVARAGRFGTKGLAITFVSDENDAKILNDVQDRFEVNISELP 415
Score = 127 (49.8 bits), Expect = 8.9e-33, Sum P(2) = 8.9e-33
Identities = 27/83 (32%), Positives = 45/83 (54%)
Query: 2 NVQCHACIGGTNLSEDLRKLDYG-QHVVSGTPGRVFDMIRRRVLRTRNIKMLVLDEADEM 60
NV+ GG ++ +D L H+V GTPGR+ + R + L ++IK +LDE D+M
Sbjct: 142 NVKVAVFFGGLSIKKDEEVLKKNCPHIVVGTPGRILALARNKSLNLKHIKHFILDECDKM 201
Query: 61 LNK-GFKEQIYDVYRYLPPATQV 82
L + + + +++R P QV
Sbjct: 202 LEQLDMRRDVQEIFRMTPHEKQV 224
>RGD|70923 [details] [associations]
symbol:Ddx39b "DEAD (Asp-Glu-Ala-Asp) box polypeptide 39B"
species:10116 "Rattus norvegicus" [GO:0000245 "spliceosomal complex
assembly" evidence=IEA;ISO] [GO:0000346 "transcription export
complex" evidence=IEA;ISO] [GO:0000398 "mRNA splicing, via
spliceosome" evidence=ISO] [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0004004 "ATP-dependent RNA helicase activity"
evidence=IEA;ISO] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISO] [GO:0005681 "spliceosomal
complex" evidence=IEA;ISO] [GO:0005687 "U4 snRNP" evidence=IEA;ISO]
[GO:0005688 "U6 snRNP" evidence=IEA;ISO] [GO:0005737 "cytoplasm"
evidence=IEA;ISO] [GO:0006406 "mRNA export from nucleus"
evidence=ISO] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0008186 "RNA-dependent ATPase activity"
evidence=ISO] [GO:0008380 "RNA splicing" evidence=ISO] [GO:0010501
"RNA secondary structure unwinding" evidence=IEA;ISO] [GO:0016607
"nuclear speck" evidence=IEA] [GO:0017070 "U6 snRNA binding"
evidence=IEA;ISO] [GO:0030621 "U4 snRNA binding" evidence=IEA;ISO]
[GO:0043008 "ATP-dependent protein binding" evidence=IEA;ISO]
[GO:0046784 "intronless viral mRNA export from host nucleus"
evidence=IEA;ISO] InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270
Pfam:PF00271 PROSITE:PS51194 SMART:SM00490 RGD:70923 GO:GO:0005524
GO:GO:0005737 GO:GO:0016607 GO:GO:0005681 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0000245 GO:GO:0004004
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195 GO:GO:0010501
GO:GO:0017070 HOVERGEN:HBG107334 OrthoDB:EOG4XSKPX
GeneTree:ENSGT00660000095549 CTD:7919 KO:K12812 OMA:NAENPAI
GO:GO:0000346 GO:GO:0005687 GO:GO:0005688 GO:GO:0030621
GO:GO:0046784 EMBL:M75168 EMBL:AF387339 EMBL:AJ314857 EMBL:BC080243
IPI:IPI00215291 PIR:A42811 RefSeq:NP_579834.2 UniGene:Rn.202950
ProteinModelPortal:Q63413 SMR:Q63413 STRING:Q63413
World-2DPAGE:0004:Q63413 PRIDE:Q63413 Ensembl:ENSRNOT00000001115
GeneID:114612 KEGG:rno:114612 UCSC:RGD:70923 InParanoid:Q63413
NextBio:618775 ArrayExpress:Q63413 Genevestigator:Q63413
GermOnline:ENSRNOG00000000841 Uniprot:Q63413
Length = 428
Score = 254 (94.5 bits), Expect = 8.9e-33, Sum P(2) = 8.9e-33
Identities = 43/113 (38%), Positives = 76/113 (67%)
Query: 85 LTEKMREANFTVSSMHGDMPQKERDGIMKEFRSGTSRVLITTDVWARGIDVQQVSLVINY 144
L + + E NF ++H MPQ+ER ++F+ R+L+ T+++ RG+D+++V++ NY
Sbjct: 303 LAQLLVEQNFPAIAIHRGMPQEERLSRYQQFKDFQRRILVATNLFGRGMDIERVNIAFNY 362
Query: 145 DLPNNRELYIHRIGRSGRFGRKGVAISFVKSD-DIRILRDIEQYYSTQIDEMP 196
D+P + + Y+HR+ R+GRFG KG+AI+FV + D +IL D++ + I E+P
Sbjct: 363 DMPEDSDTYLHRVARAGRFGTKGLAITFVSDENDAKILNDVQDRFEVNISELP 415
Score = 127 (49.8 bits), Expect = 8.9e-33, Sum P(2) = 8.9e-33
Identities = 27/83 (32%), Positives = 45/83 (54%)
Query: 2 NVQCHACIGGTNLSEDLRKLDYG-QHVVSGTPGRVFDMIRRRVLRTRNIKMLVLDEADEM 60
NV+ GG ++ +D L H+V GTPGR+ + R + L ++IK +LDE D+M
Sbjct: 142 NVKVAVFFGGLSIKKDEEVLKKNCPHIVVGTPGRILALARNKSLNLKHIKHFILDECDKM 201
Query: 61 LNK-GFKEQIYDVYRYLPPATQV 82
L + + + +++R P QV
Sbjct: 202 LEQLDMRRDVQEIFRMTPHEKQV 224
>UNIPROTKB|Q5E970 [details] [associations]
symbol:DDX39 "DEAD (Asp-Glu-Ala-Asp) box polypeptide 39
isoform 1" species:9913 "Bos taurus" [GO:0006406 "mRNA export from
nucleus" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0000398 "mRNA splicing, via
spliceosome" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0003676 GO:GO:0006406
GO:GO:0000398 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 eggNOG:COG0513 HOGENOM:HOG000268797
InterPro:IPR014014 PROSITE:PS51195 CTD:10212 HOVERGEN:HBG107334
KO:K13182 OrthoDB:EOG4XSKPX GeneTree:ENSGT00660000095549
OMA:WANCVIS EMBL:DAAA02019335 EMBL:BT021050 IPI:IPI00700228
RefSeq:NP_001029924.1 UniGene:Bt.29896 SMR:Q5E970 STRING:Q5E970
Ensembl:ENSBTAT00000029088 GeneID:614215 KEGG:bta:614215
InParanoid:Q5E970 NextBio:20899000 Uniprot:Q5E970
Length = 427
Score = 246 (91.7 bits), Expect = 1.1e-32, Sum P(2) = 1.1e-32
Identities = 41/113 (36%), Positives = 76/113 (67%)
Query: 85 LTEKMREANFTVSSMHGDMPQKERDGIMKEFRSGTSRVLITTDVWARGIDVQQVSLVINY 144
L + + E NF ++H M Q+ER ++F+ R+L+ T+++ RG+D+++V++V NY
Sbjct: 302 LAQLLVEQNFPAIAIHRGMAQEERLSRYQQFKDFQRRILVATNLFGRGMDIERVNIVFNY 361
Query: 145 DLPNNRELYIHRIGRSGRFGRKGVAISFVKSD-DIRILRDIEQYYSTQIDEMP 196
D+P + + Y+HR+ R+GRFG KG+A++FV + D +IL D++ + + E+P
Sbjct: 362 DMPEDSDTYLHRVARAGRFGTKGLAVTFVSDENDAKILNDVQDRFEVNVAELP 414
Score = 135 (52.6 bits), Expect = 1.1e-32, Sum P(2) = 1.1e-32
Identities = 29/82 (35%), Positives = 45/82 (54%)
Query: 2 NVQCHACIGGTNLSEDLRKLDYG-QHVVSGTPGRVFDMIRRRVLRTRNIKMLVLDEADEM 60
+V+ GG ++ +D L HVV GTPGR+ ++R R L RN+K VLDE D+M
Sbjct: 141 SVKVSVFFGGLSIKKDEEVLKRNCPHVVVGTPGRILALVRNRSLNLRNVKHFVLDECDKM 200
Query: 61 LNK-GFKEQIYDVYRYLPPATQ 81
L + + + +++R P Q
Sbjct: 201 LEQLDMRRDVQEIFRLTPHEKQ 222
>UNIPROTKB|Q9KLE2 [details] [associations]
symbol:VC_A0804 "ATP-dependent RNA helicase DeaD"
species:243277 "Vibrio cholerae O1 biovar El Tor str. N16961"
[GO:0000910 "cytokinesis" evidence=ISS] [GO:0004004 "ATP-dependent
RNA helicase activity" evidence=ISS] [GO:0016070 "RNA metabolic
process" evidence=ISS] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0003676
GO:GO:0000910 EMBL:AE003853 GenomeReviews:AE003853_GR GO:GO:0016070
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0004004
InterPro:IPR014014 PROSITE:PS51195 KO:K05592 InterPro:IPR005580
Pfam:PF03880 HSSP:P10081 OMA:ILFMTPR PIR:C82415 RefSeq:NP_233190.1
ProteinModelPortal:Q9KLE2 DNASU:2612819 GeneID:2612819
KEGG:vch:VCA0804 PATRIC:20086156 ProtClustDB:CLSK789062
Uniprot:Q9KLE2
Length = 663
Score = 250 (93.1 bits), Expect = 1.2e-32, Sum P(2) = 1.2e-32
Identities = 49/115 (42%), Positives = 76/115 (66%)
Query: 83 DWLTEKMREANFTVSSMHGDMPQKERDGIMKEFRSGTSRVLITTDVWARGIDVQQVSLVI 142
DWL + F +++HGD+PQ R+ + + G +L+ TDV ARG+DV +++ V
Sbjct: 283 DWLCAR----GFKAAALHGDIPQSLRERTVDHIKQGVIDILVATDVVARGLDVPRITHVY 338
Query: 143 NYDLPNNRELYIHRIGRSGRFGRKGVAISFVKSDDIRILRDIEQYYSTQIDEMPM 197
NYD+P + E YIHRIGR+GR GRKG AI V+++ IR+LR IE+ + ++E+ +
Sbjct: 339 NYDIPFDVESYIHRIGRTGRAGRKGKAILLVRTNQIRMLRTIERVTRSSMEEIQL 393
Score = 141 (54.7 bits), Expect = 1.2e-32, Sum P(2) = 1.2e-32
Identities = 29/72 (40%), Positives = 40/72 (55%)
Query: 10 GGTNLSEDLRKLDYGQHVVSGTPGRVFDMIRRRVLRTRNIKMLVLDEADEMLNKGFKEQI 69
GG ++ + +R L G H+V GTPGRV D+I R L +LDEADEML GF + +
Sbjct: 131 GGASILDQMRALKSGAHIVVGTPGRVKDLITRDRLHLDECHTFILDEADEMLKMGFVDDV 190
Query: 70 YDVYRYLPPATQ 81
+ P + Q
Sbjct: 191 TWIMEQAPESAQ 202
>TIGR_CMR|VC_A0804 [details] [associations]
symbol:VC_A0804 "ATP-dependent RNA helicase DeaD"
species:686 "Vibrio cholerae O1 biovar El Tor" [GO:0000910
"cytokinesis" evidence=ISS] [GO:0004004 "ATP-dependent RNA helicase
activity" evidence=ISS] [GO:0016070 "RNA metabolic process"
evidence=ISS] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0003676
GO:GO:0000910 EMBL:AE003853 GenomeReviews:AE003853_GR GO:GO:0016070
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0004004
InterPro:IPR014014 PROSITE:PS51195 KO:K05592 InterPro:IPR005580
Pfam:PF03880 HSSP:P10081 OMA:ILFMTPR PIR:C82415 RefSeq:NP_233190.1
ProteinModelPortal:Q9KLE2 DNASU:2612819 GeneID:2612819
KEGG:vch:VCA0804 PATRIC:20086156 ProtClustDB:CLSK789062
Uniprot:Q9KLE2
Length = 663
Score = 250 (93.1 bits), Expect = 1.2e-32, Sum P(2) = 1.2e-32
Identities = 49/115 (42%), Positives = 76/115 (66%)
Query: 83 DWLTEKMREANFTVSSMHGDMPQKERDGIMKEFRSGTSRVLITTDVWARGIDVQQVSLVI 142
DWL + F +++HGD+PQ R+ + + G +L+ TDV ARG+DV +++ V
Sbjct: 283 DWLCAR----GFKAAALHGDIPQSLRERTVDHIKQGVIDILVATDVVARGLDVPRITHVY 338
Query: 143 NYDLPNNRELYIHRIGRSGRFGRKGVAISFVKSDDIRILRDIEQYYSTQIDEMPM 197
NYD+P + E YIHRIGR+GR GRKG AI V+++ IR+LR IE+ + ++E+ +
Sbjct: 339 NYDIPFDVESYIHRIGRTGRAGRKGKAILLVRTNQIRMLRTIERVTRSSMEEIQL 393
Score = 141 (54.7 bits), Expect = 1.2e-32, Sum P(2) = 1.2e-32
Identities = 29/72 (40%), Positives = 40/72 (55%)
Query: 10 GGTNLSEDLRKLDYGQHVVSGTPGRVFDMIRRRVLRTRNIKMLVLDEADEMLNKGFKEQI 69
GG ++ + +R L G H+V GTPGRV D+I R L +LDEADEML GF + +
Sbjct: 131 GGASILDQMRALKSGAHIVVGTPGRVKDLITRDRLHLDECHTFILDEADEMLKMGFVDDV 190
Query: 70 YDVYRYLPPATQ 81
+ P + Q
Sbjct: 191 TWIMEQAPESAQ 202
>UNIPROTKB|F8VQ10 [details] [associations]
symbol:DDX39B "Spliceosome RNA helicase DDX39B"
species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0003676
EMBL:AL662847 EMBL:AL662801 EMBL:CR753892 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014
PROSITE:PS51195 OMA:NAENPAI EMBL:BX001040 EMBL:BX248516
EMBL:BX927320 EMBL:CR753820 EMBL:CR753864 HGNC:HGNC:13917
ChiTaRS:DDX39B EMBL:CR942185 IPI:IPI01025218 SMR:F8VQ10
Ensembl:ENST00000417556 Ensembl:ENST00000547039
Ensembl:ENST00000547489 Ensembl:ENST00000548340
Ensembl:ENST00000548614 Ensembl:ENST00000550217
Ensembl:ENST00000552288 Uniprot:F8VQ10
Length = 443
Score = 254 (94.5 bits), Expect = 1.2e-32, Sum P(2) = 1.2e-32
Identities = 43/113 (38%), Positives = 76/113 (67%)
Query: 85 LTEKMREANFTVSSMHGDMPQKERDGIMKEFRSGTSRVLITTDVWARGIDVQQVSLVINY 144
L + + E NF ++H MPQ+ER ++F+ R+L+ T+++ RG+D+++V++ NY
Sbjct: 318 LAQLLVEQNFPAIAIHRGMPQEERLSRYQQFKDFQRRILVATNLFGRGMDIERVNIAFNY 377
Query: 145 DLPNNRELYIHRIGRSGRFGRKGVAISFVKSD-DIRILRDIEQYYSTQIDEMP 196
D+P + + Y+HR+ R+GRFG KG+AI+FV + D +IL D++ + I E+P
Sbjct: 378 DMPEDSDTYLHRVARAGRFGTKGLAITFVSDENDAKILNDVQDRFEVNISELP 430
Score = 127 (49.8 bits), Expect = 1.2e-32, Sum P(2) = 1.2e-32
Identities = 27/83 (32%), Positives = 45/83 (54%)
Query: 2 NVQCHACIGGTNLSEDLRKLDYG-QHVVSGTPGRVFDMIRRRVLRTRNIKMLVLDEADEM 60
NV+ GG ++ +D L H+V GTPGR+ + R + L ++IK +LDE D+M
Sbjct: 157 NVKVAVFFGGLSIKKDEEVLKKNCPHIVVGTPGRILALARNKSLNLKHIKHFILDECDKM 216
Query: 61 LNK-GFKEQIYDVYRYLPPATQV 82
L + + + +++R P QV
Sbjct: 217 LEQLDMRRDVQEIFRMTPHEKQV 239
>TAIR|locus:2148027 [details] [associations]
symbol:UAP56b "homolog of human UAP56 b" species:3702
"Arabidopsis thaliana" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=ISM] [GO:0005737 "cytoplasm" evidence=ISM] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA;ISS] [GO:0005618
"cell wall" evidence=IDA] [GO:0005829 "cytosol" evidence=RCA]
[GO:0009506 "plasmodesma" evidence=IDA] InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS51194
SMART:SM00490 GO:GO:0009506 GO:GO:0005524 EMBL:CP002688
GO:GO:0005618 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
UniGene:At.49007 UniGene:At.73904 GeneID:830990 KEGG:ath:AT5G11200
OMA:LECVINY IPI:IPI00938969 RefSeq:NP_001154706.1
ProteinModelPortal:F4JWF6 SMR:F4JWF6 PRIDE:F4JWF6
EnsemblPlants:AT5G11200.2 Uniprot:F4JWF6
Length = 486
Score = 264 (98.0 bits), Expect = 1.3e-32, Sum P(2) = 1.3e-32
Identities = 48/113 (42%), Positives = 76/113 (67%)
Query: 85 LTEKMREANFTVSSMHGDMPQKERDGIMKEFRSGTSRVLITTDVWARGIDVQQVSLVINY 144
L + + E NF +H M Q+ER K F+ G R+L+ TD+ RGID+++V++VINY
Sbjct: 363 LNKLLVECNFPSICIHSGMSQEERLTRYKSFKEGHKRILVATDLVGRGIDIERVNIVINY 422
Query: 145 DLPNNRELYIHRIGRSGRFGRKGVAISFVKS-DDIRILRDIEQYYSTQIDEMP 196
D+P++ + Y+HR+GR+GRFG KG+AI+FV S D +L +++ + I E+P
Sbjct: 423 DMPDSADTYLHRVGRAGRFGTKGLAITFVASASDSEVLNQVQERFEVDIKELP 475
Score = 119 (46.9 bits), Expect = 1.3e-32, Sum P(2) = 1.3e-32
Identities = 26/76 (34%), Positives = 43/76 (56%)
Query: 10 GGTNLS--EDLRKLDYGQHVVSGTPGRVFDMIRRRVLRTRNIKMLVLDEADEMLNK-GFK 66
GG N+ +DL K + H+V GTPGRV + R + L +N++ +LDE D+ML +
Sbjct: 151 GGVNIKIHKDLLKNEC-PHIVVGTPGRVLALAREKDLSLKNVRHFILDECDKMLESLDMR 209
Query: 67 EQIYDVYRYLPPATQV 82
+ ++++ P QV
Sbjct: 210 RDVQEIFKMTPHDKQV 225
>UNIPROTKB|A4QSS5 [details] [associations]
symbol:DBP2 "ATP-dependent RNA helicase DBP2"
species:242507 "Magnaporthe oryzae 70-15" [GO:0043581 "mycelium
development" evidence=IEP] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0005634
GO:GO:0005737 GO:GO:0000184 EMBL:CM001233 GO:GO:0003723
GO:GO:0043581 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0006364 GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 OrthoDB:EOG47SWP6 RefSeq:XP_003712846.1
ProteinModelPortal:A4QSS5 EnsemblFungi:MGG_16901T0 GeneID:12985738
KEGG:mgr:MGG_16901 Uniprot:A4QSS5
Length = 548
Score = 258 (95.9 bits), Expect = 1.5e-32, Sum P(2) = 1.5e-32
Identities = 47/102 (46%), Positives = 72/102 (70%)
Query: 83 DWLTEKMREANFTVSSMHGDMPQKERDGIMKEFRSGTSRVLITTDVWARGIDVQQVSLVI 142
D +T +R+ + S+HGD Q ERD ++ +F++G S +++ TDV +RGIDV+ ++ V+
Sbjct: 388 DEITRFLRQDGWPALSIHGDKQQNERDWVLDQFKTGKSPIMVATDVASRGIDVRNITHVL 447
Query: 143 NYDLPNNRELYIHRIGRSGRFGRKGVAISFVKSDDIRILRDI 184
NYD PNN E YIHRIGR+GR G KG AI+F +++ + RD+
Sbjct: 448 NYDYPNNSEDYIHRIGRTGRAGAKGTAITFFTTENSKQARDL 489
Score = 128 (50.1 bits), Expect = 1.5e-32, Sum P(2) = 1.5e-32
Identities = 29/77 (37%), Positives = 39/77 (50%)
Query: 6 HACI-GGTNLSEDLRKLDYGQHVVSGTPGRVFDMIRRRVLRTRNIKMLVLDEADEMLNKG 64
+ C+ GG +R L G V TPGR+ DM+ R + LVLDEAD ML+ G
Sbjct: 229 NTCVYGGVPKGPQIRDLSRGVEVCIATPGRLIDMLESGKTNLRRVTYLVLDEADRMLDMG 288
Query: 65 FKEQIYDVYRYLPPATQ 81
F+ QI + + P Q
Sbjct: 289 FEPQIRKIIGQIRPDRQ 305
>UNIPROTKB|E2QY95 [details] [associations]
symbol:DDX39A "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0006406 "mRNA export from nucleus"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0000398 "mRNA splicing, via
spliceosome" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0003676 GO:GO:0006406
GO:GO:0000398 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195 CTD:10212
KO:K13182 GeneTree:ENSGT00660000095549 OMA:WANCVIS
EMBL:AAEX03012368 RefSeq:XP_533895.2 Ensembl:ENSCAFT00000025943
GeneID:476689 KEGG:cfa:476689 NextBio:20852303 Uniprot:E2QY95
Length = 427
Score = 247 (92.0 bits), Expect = 1.8e-32, Sum P(2) = 1.8e-32
Identities = 42/113 (37%), Positives = 76/113 (67%)
Query: 85 LTEKMREANFTVSSMHGDMPQKERDGIMKEFRSGTSRVLITTDVWARGIDVQQVSLVINY 144
L + + E NF ++H M Q+ER ++F+ R+L+ T+++ RG+D+++V++V NY
Sbjct: 302 LAQLLVEQNFPAIAIHRGMAQEERLSRYQQFKDFQRRILVATNLFGRGMDIERVNIVFNY 361
Query: 145 DLPNNRELYIHRIGRSGRFGRKGVAISFVKSD-DIRILRDIEQYYSTQIDEMP 196
D+P + + Y+HR+ R+GRFG KG+AI+FV + D +IL D++ + + E+P
Sbjct: 362 DMPEDSDTYLHRVARAGRFGTKGLAITFVSDENDAKILNDVQDRFEVNVAELP 414
Score = 132 (51.5 bits), Expect = 1.8e-32, Sum P(2) = 1.8e-32
Identities = 28/82 (34%), Positives = 45/82 (54%)
Query: 2 NVQCHACIGGTNLSEDLRKLDYG-QHVVSGTPGRVFDMIRRRVLRTRNIKMLVLDEADEM 60
+V+ GG ++ +D L HVV GTPGR+ ++R R L +N+K VLDE D+M
Sbjct: 141 SVKVSVFFGGLSIKKDEEVLKKNCPHVVVGTPGRILALVRNRSLNLKNVKHFVLDECDKM 200
Query: 61 LNK-GFKEQIYDVYRYLPPATQ 81
L + + + +++R P Q
Sbjct: 201 LEQLDMRRDVQEIFRLTPHEKQ 222
>ZFIN|ZDB-GENE-040426-2902 [details] [associations]
symbol:ddx39ab "DEAD (Asp-Glu-Ala-Asp) box
polypeptide 39Ab" species:7955 "Danio rerio" [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0016787
"hydrolase activity" evidence=IEA] InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS51194
SMART:SM00490 ZFIN:ZDB-GENE-040426-2902 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
HOGENOM:HOG000268797 InterPro:IPR014014 PROSITE:PS51195 HSSP:P10081
HOVERGEN:HBG107334 KO:K13182 OrthoDB:EOG4XSKPX
GeneTree:ENSGT00660000095549 OMA:WANCVIS CTD:7919 EMBL:FP101915
EMBL:BC044169 EMBL:BC067555 EMBL:BC128804 EMBL:BX248081
IPI:IPI00631848 RefSeq:NP_998142.1 UniGene:Dr.75872 SMR:Q803W0
STRING:Q803W0 Ensembl:ENSDART00000019957 GeneID:406249
KEGG:dre:406249 InParanoid:Q803W0 NextBio:20817884 Uniprot:Q803W0
Length = 427
Score = 248 (92.4 bits), Expect = 2.1e-32, Sum P(2) = 2.1e-32
Identities = 42/113 (37%), Positives = 77/113 (68%)
Query: 85 LTEKMREANFTVSSMHGDMPQKERDGIMKEFRSGTSRVLITTDVWARGIDVQQVSLVINY 144
L++ + E NF ++H M Q+ER ++F+ R+L+ T+++ RG+D+++V++V NY
Sbjct: 302 LSQLLVEQNFPAIAIHRGMAQEERLSRYQQFKDFQRRILVATNLFGRGMDIERVNIVFNY 361
Query: 145 DLPNNRELYIHRIGRSGRFGRKGVAISFVKSD-DIRILRDIEQYYSTQIDEMP 196
D+P + + Y+HR+ R+GRFG KG+AI+FV + D +IL D++ + + E+P
Sbjct: 362 DMPEDSDTYLHRVARAGRFGTKGLAITFVSDETDAKILNDVQDRFEVNVAELP 414
Score = 130 (50.8 bits), Expect = 2.1e-32, Sum P(2) = 2.1e-32
Identities = 26/74 (35%), Positives = 42/74 (56%)
Query: 10 GGTNLSEDLRKLDYG-QHVVSGTPGRVFDMIRRRVLRTRNIKMLVLDEADEMLNK-GFKE 67
GG ++ +D L H+V GTPGR+ ++R + L +N+K VLDE D+ML + +
Sbjct: 149 GGMSIKKDEDVLKKSCPHIVVGTPGRILALVRNKTLNLKNVKHFVLDECDKMLEQLDMRR 208
Query: 68 QIYDVYRYLPPATQ 81
+ D++R P Q
Sbjct: 209 DVQDIFRLTPHEKQ 222
>MGI|MGI:1915528 [details] [associations]
symbol:Ddx39 "DEAD (Asp-Glu-Ala-Asp) box polypeptide 39"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0000398 "mRNA splicing, via spliceosome"
evidence=ISO] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=ISO]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0006397 "mRNA processing"
evidence=IEA] [GO:0006406 "mRNA export from nucleus" evidence=ISO]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0008380 "RNA splicing" evidence=IEA] [GO:0016787 "hydrolase
activity" evidence=IEA] InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS51194 SMART:SM00490
MGI:MGI:1915528 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737
GO:GO:0003676 GO:GO:0006406 GO:GO:0000398 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513
InterPro:IPR014014 PROSITE:PS51195 HOVERGEN:HBG107334 KO:K13182
OrthoDB:EOG4XSKPX EMBL:AK088894 EMBL:AK145927 EMBL:AK146294
EMBL:AK150997 EMBL:AK162752 EMBL:AK168079 EMBL:BC020134
IPI:IPI00123878 IPI:IPI00553461 RefSeq:NP_932099.2 UniGene:Mm.28222
ProteinModelPortal:Q8VDW0 SMR:Q8VDW0 STRING:Q8VDW0
PhosphoSite:Q8VDW0 PaxDb:Q8VDW0 PRIDE:Q8VDW0
Ensembl:ENSMUST00000019576 Ensembl:ENSMUST00000109810
Ensembl:ENSMUST00000172396 GeneID:68278 KEGG:mmu:68278
UCSC:uc008chc.2 CTD:68278 GeneTree:ENSGT00660000095549
InParanoid:Q8VDW0 OMA:WANCVIS NextBio:326910 Bgee:Q8VDW0
CleanEx:MM_DDX39 Genevestigator:Q8VDW0
GermOnline:ENSMUSG00000005481 Uniprot:Q8VDW0
Length = 427
Score = 246 (91.7 bits), Expect = 2.3e-32, Sum P(2) = 2.3e-32
Identities = 41/113 (36%), Positives = 76/113 (67%)
Query: 85 LTEKMREANFTVSSMHGDMPQKERDGIMKEFRSGTSRVLITTDVWARGIDVQQVSLVINY 144
L + + E NF ++H M Q+ER ++F+ R+L+ T+++ RG+D+++V++V NY
Sbjct: 302 LAQLLVEQNFPAIAIHRGMAQEERLSRYQQFKDFQRRILVATNLFGRGMDIERVNIVFNY 361
Query: 145 DLPNNRELYIHRIGRSGRFGRKGVAISFVKSD-DIRILRDIEQYYSTQIDEMP 196
D+P + + Y+HR+ R+GRFG KG+A++FV + D +IL D++ + + E+P
Sbjct: 362 DMPEDSDTYLHRVARAGRFGTKGLAVTFVSDENDAKILNDVQDRFEVNVAELP 414
Score = 132 (51.5 bits), Expect = 2.3e-32, Sum P(2) = 2.3e-32
Identities = 29/82 (35%), Positives = 45/82 (54%)
Query: 2 NVQCHACIGGTNLSEDLRKLDYG-QHVVSGTPGRVFDMIRRRVLRTRNIKMLVLDEADEM 60
+V+ GG ++ +D L HVV GTPGR+ ++R R L RN+K VLDE D+M
Sbjct: 141 SVKVSVFFGGLSIKKDEDVLKKNCPHVVVGTPGRILALVRSRSLNLRNVKHFVLDECDKM 200
Query: 61 LNK-GFKEQIYDVYRYLPPATQ 81
L + + + +++R P Q
Sbjct: 201 LEQLDMRRDVQEIFRLTPHEKQ 222
>RGD|619920 [details] [associations]
symbol:Ddx39a "DEAD (Asp-Glu-Ala-Asp) box polypeptide 39A"
species:10116 "Rattus norvegicus" [GO:0000398 "mRNA splicing, via
spliceosome" evidence=IEA;ISO] [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA;ISO] [GO:0005737 "cytoplasm"
evidence=IEA;ISO] [GO:0006406 "mRNA export from nucleus"
evidence=IEA;ISO] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270
Pfam:PF00271 PROSITE:PS51194 SMART:SM00490 EMBL:AF063447 RGD:619920
GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0003676
GO:GO:0006406 GO:GO:0000398 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 CTD:10212 HOVERGEN:HBG107334 KO:K13182
OrthoDB:EOG4XSKPX GeneTree:ENSGT00660000095549 OMA:WANCVIS
EMBL:BC086328 IPI:IPI00325144 RefSeq:NP_446015.2 UniGene:Rn.161716
ProteinModelPortal:Q5U216 SMR:Q5U216 STRING:Q5U216 PRIDE:Q5U216
Ensembl:ENSRNOT00000045974 GeneID:89827 KEGG:rno:89827
InParanoid:Q5U216 NextBio:617744 Genevestigator:Q5U216
GermOnline:ENSRNOG00000004373 Uniprot:Q5U216
Length = 427
Score = 246 (91.7 bits), Expect = 2.3e-32, Sum P(2) = 2.3e-32
Identities = 41/113 (36%), Positives = 76/113 (67%)
Query: 85 LTEKMREANFTVSSMHGDMPQKERDGIMKEFRSGTSRVLITTDVWARGIDVQQVSLVINY 144
L + + E NF ++H M Q+ER ++F+ R+L+ T+++ RG+D+++V++V NY
Sbjct: 302 LAQLLVEQNFPAIAIHRGMAQEERLSRYQQFKDFQRRILVATNLFGRGMDIERVNIVFNY 361
Query: 145 DLPNNRELYIHRIGRSGRFGRKGVAISFVKSD-DIRILRDIEQYYSTQIDEMP 196
D+P + + Y+HR+ R+GRFG KG+A++FV + D +IL D++ + + E+P
Sbjct: 362 DMPEDSDTYLHRVARAGRFGTKGLAVTFVSDENDAKILNDVQDRFEVNVAELP 414
Score = 132 (51.5 bits), Expect = 2.3e-32, Sum P(2) = 2.3e-32
Identities = 29/82 (35%), Positives = 45/82 (54%)
Query: 2 NVQCHACIGGTNLSEDLRKLDYG-QHVVSGTPGRVFDMIRRRVLRTRNIKMLVLDEADEM 60
+V+ GG ++ +D L HVV GTPGR+ ++R R L RN+K VLDE D+M
Sbjct: 141 SVKVSVFFGGLSIKKDEDVLKKNCPHVVVGTPGRILALVRSRSLNLRNVKHFVLDECDKM 200
Query: 61 LNK-GFKEQIYDVYRYLPPATQ 81
L + + + +++R P Q
Sbjct: 201 LEQLDMRRDVQEIFRLTPHEKQ 222
>UNIPROTKB|Q9KU63 [details] [associations]
symbol:VC_0660 "ATP-dependent RNA helicase SrmB"
species:243277 "Vibrio cholerae O1 biovar El Tor str. N16961"
[GO:0004004 "ATP-dependent RNA helicase activity" evidence=ISS]
[GO:0016070 "RNA metabolic process" evidence=ISS]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 EMBL:AE003852 GenomeReviews:AE003852_GR
GO:GO:0003676 GO:GO:0016070 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0004004 InterPro:IPR014014 PROSITE:PS51195
HSSP:P10081 OMA:PLAMDQR KO:K05590 ProtClustDB:PRK11192 PIR:F82295
RefSeq:NP_230309.1 ProteinModelPortal:Q9KU63 DNASU:2615450
GeneID:2615450 KEGG:vch:VC0660 PATRIC:20080435 Uniprot:Q9KU63
Length = 423
Score = 276 (102.2 bits), Expect = 2.6e-32, Sum P(2) = 2.6e-32
Identities = 56/149 (37%), Positives = 89/149 (59%)
Query: 59 EMLNKGFKEQIYDVYRYLPPATQVDWLTEKMREANFTVSSMHGDMPQKERDGIMKEFRSG 118
E+L K EQ +L ++ L ++ +A + + G+MPQ R+ + FR G
Sbjct: 236 ELLKKILTEQAERSIVFLKTRERLADLRAELEKAQIPCAWIQGEMPQDRRNNAISRFREG 295
Query: 119 TSRVLITTDVWARGIDVQQVSLVINYDLPNNRELYIHRIGRSGRFGRKGVAISFVKSDDI 178
+L+ TDV ARGIDV +S VIN+DLP + ++Y+HRIGR+GR G+KG+AIS V++ D
Sbjct: 296 DVNILLATDVAARGIDVPDISHVINFDLPRSADVYLHRIGRTGRAGKKGIAISLVEAHDQ 355
Query: 179 RILRDIEQYYSTQIDEMPMNGKRSLHSYP 207
++ +E+Y ++ E ++G R H P
Sbjct: 356 PMMARVERYIKEEVKERFIDGLRPKHKKP 384
Score = 96 (38.9 bits), Expect = 2.6e-32, Sum P(2) = 2.6e-32
Identities = 23/56 (41%), Positives = 29/56 (51%)
Query: 10 GGTNLSEDLRKLDYGQHVVSGTPGRVFDMIRRRVLRTRNIKMLVLDEADEMLNKGF 65
GG E L Q +V TPGR+ + I R I+ L+LDEAD ML+ GF
Sbjct: 111 GGVQYQEHADILATTQDIVVATPGRLLEYIDAERFDCRAIEWLILDEADRMLDMGF 166
>TIGR_CMR|VC_0660 [details] [associations]
symbol:VC_0660 "ATP-dependent RNA helicase SrmB"
species:686 "Vibrio cholerae O1 biovar El Tor" [GO:0004004
"ATP-dependent RNA helicase activity" evidence=ISS] [GO:0016070
"RNA metabolic process" evidence=ISS] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
EMBL:AE003852 GenomeReviews:AE003852_GR GO:GO:0003676 GO:GO:0016070
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0004004
InterPro:IPR014014 PROSITE:PS51195 HSSP:P10081 OMA:PLAMDQR
KO:K05590 ProtClustDB:PRK11192 PIR:F82295 RefSeq:NP_230309.1
ProteinModelPortal:Q9KU63 DNASU:2615450 GeneID:2615450
KEGG:vch:VC0660 PATRIC:20080435 Uniprot:Q9KU63
Length = 423
Score = 276 (102.2 bits), Expect = 2.6e-32, Sum P(2) = 2.6e-32
Identities = 56/149 (37%), Positives = 89/149 (59%)
Query: 59 EMLNKGFKEQIYDVYRYLPPATQVDWLTEKMREANFTVSSMHGDMPQKERDGIMKEFRSG 118
E+L K EQ +L ++ L ++ +A + + G+MPQ R+ + FR G
Sbjct: 236 ELLKKILTEQAERSIVFLKTRERLADLRAELEKAQIPCAWIQGEMPQDRRNNAISRFREG 295
Query: 119 TSRVLITTDVWARGIDVQQVSLVINYDLPNNRELYIHRIGRSGRFGRKGVAISFVKSDDI 178
+L+ TDV ARGIDV +S VIN+DLP + ++Y+HRIGR+GR G+KG+AIS V++ D
Sbjct: 296 DVNILLATDVAARGIDVPDISHVINFDLPRSADVYLHRIGRTGRAGKKGIAISLVEAHDQ 355
Query: 179 RILRDIEQYYSTQIDEMPMNGKRSLHSYP 207
++ +E+Y ++ E ++G R H P
Sbjct: 356 PMMARVERYIKEEVKERFIDGLRPKHKKP 384
Score = 96 (38.9 bits), Expect = 2.6e-32, Sum P(2) = 2.6e-32
Identities = 23/56 (41%), Positives = 29/56 (51%)
Query: 10 GGTNLSEDLRKLDYGQHVVSGTPGRVFDMIRRRVLRTRNIKMLVLDEADEMLNKGF 65
GG E L Q +V TPGR+ + I R I+ L+LDEAD ML+ GF
Sbjct: 111 GGVQYQEHADILATTQDIVVATPGRLLEYIDAERFDCRAIEWLILDEADRMLDMGF 166
>UNIPROTKB|Q3T147 [details] [associations]
symbol:DDX39B "Spliceosome RNA helicase DDX39B"
species:9913 "Bos taurus" [GO:0006406 "mRNA export from nucleus"
evidence=ISS] [GO:0000398 "mRNA splicing, via spliceosome"
evidence=ISS] [GO:0016607 "nuclear speck" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0046784 "intronless viral mRNA export
from host nucleus" evidence=IEA] [GO:0043008 "ATP-dependent protein
binding" evidence=IEA] [GO:0030621 "U4 snRNA binding" evidence=IEA]
[GO:0017070 "U6 snRNA binding" evidence=IEA] [GO:0010501 "RNA
secondary structure unwinding" evidence=IEA] [GO:0005688 "U6 snRNP"
evidence=IEA] [GO:0005687 "U4 snRNP" evidence=IEA] [GO:0005681
"spliceosomal complex" evidence=IEA] [GO:0004004 "ATP-dependent RNA
helicase activity" evidence=IEA] [GO:0000346 "transcription export
complex" evidence=IEA] [GO:0000245 "spliceosomal complex assembly"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0005737
GO:GO:0016607 GO:GO:0005681 GO:GO:0006406 GO:GO:0000398
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0000245
GO:GO:0004004 eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
GO:GO:0010501 GO:GO:0017070 HSSP:Q5STU4 HOVERGEN:HBG107334
OrthoDB:EOG4XSKPX GeneTree:ENSGT00660000095549 EMBL:BC102131
IPI:IPI00690141 RefSeq:NP_001028801.1 UniGene:Bt.4945
ProteinModelPortal:Q3T147 SMR:Q3T147 STRING:Q3T147 PRIDE:Q3T147
Ensembl:ENSBTAT00000029090 GeneID:540191 KEGG:bta:540191 CTD:7919
InParanoid:Q3T147 KO:K12812 OMA:NAENPAI NextBio:20878478
ArrayExpress:Q3T147 GO:GO:0000346 GO:GO:0005687 GO:GO:0005688
GO:GO:0030621 GO:GO:0046784 Uniprot:Q3T147
Length = 428
Score = 254 (94.5 bits), Expect = 3.0e-32, Sum P(2) = 3.0e-32
Identities = 43/113 (38%), Positives = 76/113 (67%)
Query: 85 LTEKMREANFTVSSMHGDMPQKERDGIMKEFRSGTSRVLITTDVWARGIDVQQVSLVINY 144
L + + E NF ++H MPQ+ER ++F+ R+L+ T+++ RG+D+++V++ NY
Sbjct: 303 LAQLLVEQNFPAIAIHRGMPQEERLSRYQQFKDFQRRILVATNLFGRGMDIERVNIAFNY 362
Query: 145 DLPNNRELYIHRIGRSGRFGRKGVAISFVKSD-DIRILRDIEQYYSTQIDEMP 196
D+P + + Y+HR+ R+GRFG KG+AI+FV + D +IL D++ + I E+P
Sbjct: 363 DMPEDSDTYLHRVARAGRFGTKGLAITFVSDENDAKILNDVQDRFEVNISELP 415
Score = 122 (48.0 bits), Expect = 3.0e-32, Sum P(2) = 3.0e-32
Identities = 26/83 (31%), Positives = 45/83 (54%)
Query: 2 NVQCHACIGGTNLSEDLRKLDYG-QHVVSGTPGRVFDMIRRRVLRTRNIKMLVLDEADEM 60
+V+ GG ++ +D L H+V GTPGR+ + R + L ++IK +LDE D+M
Sbjct: 142 SVKVAVFFGGLSIKKDEEVLKKNCPHIVVGTPGRILALARNKSLNLKHIKHFILDECDKM 201
Query: 61 LNK-GFKEQIYDVYRYLPPATQV 82
L + + + +++R P QV
Sbjct: 202 LEQLDMRRDVQEIFRMTPHEKQV 224
>UNIPROTKB|F1SCH3 [details] [associations]
symbol:DDX39A "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0006406 "mRNA export from nucleus" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0000398 "mRNA splicing, via spliceosome"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0003676 GO:GO:0006406
GO:GO:0000398 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
GeneTree:ENSGT00660000095549 OMA:WANCVIS EMBL:FP103015
Ensembl:ENSSSCT00000015052 Uniprot:F1SCH3
Length = 475
Score = 247 (92.0 bits), Expect = 4.0e-32, Sum P(2) = 4.0e-32
Identities = 42/113 (37%), Positives = 76/113 (67%)
Query: 85 LTEKMREANFTVSSMHGDMPQKERDGIMKEFRSGTSRVLITTDVWARGIDVQQVSLVINY 144
L + + E NF ++H M Q+ER ++F+ R+L+ T+++ RG+D+++V++V NY
Sbjct: 350 LAQLLVEQNFPAIAIHRGMAQEERLSRYQQFKDFQRRILVATNLFGRGMDIERVNIVFNY 409
Query: 145 DLPNNRELYIHRIGRSGRFGRKGVAISFVKSD-DIRILRDIEQYYSTQIDEMP 196
D+P + + Y+HR+ R+GRFG KG+AI+FV + D +IL D++ + + E+P
Sbjct: 410 DMPEDSDTYLHRVARAGRFGTKGLAITFVSDENDAKILNDVQDRFEVNVAELP 462
Score = 132 (51.5 bits), Expect = 4.0e-32, Sum P(2) = 4.0e-32
Identities = 28/82 (34%), Positives = 45/82 (54%)
Query: 2 NVQCHACIGGTNLSEDLRKLDYG-QHVVSGTPGRVFDMIRRRVLRTRNIKMLVLDEADEM 60
+V+ GG ++ +D L HVV GTPGR+ ++R R L +N+K VLDE D+M
Sbjct: 189 SVKVSVFFGGLSIKKDEEVLKKNCPHVVVGTPGRILALVRNRSLNLKNVKHFVLDECDKM 248
Query: 61 LNK-GFKEQIYDVYRYLPPATQ 81
L + + + +++R P Q
Sbjct: 249 LEQLDMRRDVQEIFRLTPHEKQ 270
>UNIPROTKB|B4DLW8 [details] [associations]
symbol:DDX5 "Probable ATP-dependent RNA helicase DDX5"
species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0003712 "transcription cofactor activity"
evidence=IEA] [GO:0003724 "RNA helicase activity" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 InterPro:IPR012587 Pfam:PF00270 Pfam:PF00271
Pfam:PF08061 PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490
GO:GO:0005524 GO:GO:0005634 GO:GO:0003676 GO:GO:0003712
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
EMBL:AC009994 GO:GO:0003724 HOVERGEN:HBG015893 UniGene:Hs.279806
HGNC:HGNC:2746 ChiTaRS:DDX5 EMBL:AK297192 IPI:IPI00798375
STRING:B4DLW8 Ensembl:ENST00000450599 UCSC:uc010wqa.1
Uniprot:B4DLW8
Length = 535
Score = 245 (91.3 bits), Expect = 4.2e-32, Sum P(3) = 4.2e-32
Identities = 47/102 (46%), Positives = 67/102 (65%)
Query: 83 DWLTEKMREANFTVSSMHGDMPQKERDGIMKEFRSGTSRVLITTDVWARGIDVQQVSLVI 142
D LT KMR + +HGD Q+ERD ++ EF+ G + +LI TDV +RG+DV+ V VI
Sbjct: 276 DELTRKMRRDGWPAMGIHGDKSQQERDWVLNEFKHGKAPILIATDVASRGLDVEDVKFVI 335
Query: 143 NYDLPNNRELYIHRIGRSGRFGRKGVAISFVKSDDIRILRDI 184
NYD PN+ E YIHRIGR+ R + G A +F ++I+ + D+
Sbjct: 336 NYDYPNSSEDYIHRIGRTARSTKTGTAYTFFTPNNIKQVSDL 377
Score = 118 (46.6 bits), Expect = 4.2e-32, Sum P(3) = 4.2e-32
Identities = 28/75 (37%), Positives = 37/75 (49%)
Query: 8 CI-GGTNLSEDLRKLDYGQHVVSGTPGRVFDMIRRRVLRTRNIKMLVLDEADEMLNKGFK 66
CI GG +R L+ G + TPGR+ D + R LVLDEAD ML+ GF+
Sbjct: 121 CIYGGAPKGPQIRDLERGVEICIATPGRLIDFLECGKTNLRRTTYLVLDEADRMLDMGFE 180
Query: 67 EQIYDVYRYLPPATQ 81
QI + + P Q
Sbjct: 181 PQIRKIVDQIRPDRQ 195
Score = 36 (17.7 bits), Expect = 4.2e-32, Sum P(3) = 4.2e-32
Identities = 7/26 (26%), Positives = 12/26 (46%)
Query: 183 DIEQYYSTQIDEMPMNGKRSLHSYPA 208
D Q Y + + M + ++YPA
Sbjct: 493 DSTQQYGSNVPNMHNGMNQQAYAYPA 518
>SGD|S000005730 [details] [associations]
symbol:DED1 "ATP-dependent DEAD (Asp-Glu-Ala-Asp)-box RNA
helicase" species:4932 "Saccharomyces cerevisiae" [GO:0006413
"translational initiation" evidence=IEA;IMP] [GO:0016787 "hydrolase
activity" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA;IC]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0004004 "ATP-dependent RNA helicase activity" evidence=IMP;IDA]
[GO:0033592 "RNA strand annealing activity" evidence=IDA]
[GO:0003743 "translation initiation factor activity" evidence=IEA]
[GO:0003723 "RNA binding" evidence=IEA] [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0006412 "translation" evidence=IEA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 SGD:S000005730 GO:GO:0005524 GO:GO:0005737
EMBL:BK006948 GO:GO:0006413 GO:GO:0003743 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0004004 eggNOG:COG0513
InterPro:IPR014014 PROSITE:PS51195 GeneTree:ENSGT00620000087942
HOGENOM:HOG000268804 KO:K11594 OrthoDB:EOG4XPTQ4 OMA:GNWANAN
EMBL:X57278 EMBL:Z75110 EMBL:X03245 PIR:S13653 RefSeq:NP_014847.3
RefSeq:NP_014849.3 ProteinModelPortal:P06634 SMR:P06634
DIP:DIP-5820N IntAct:P06634 MINT:MINT-697363 STRING:P06634
PaxDb:P06634 PeptideAtlas:P06634 EnsemblFungi:YOR204W GeneID:854379
GeneID:854381 KEGG:sce:YOR204W KEGG:sce:YOR206W CYGD:YOR204w
KO:K14833 SABIO-RK:P06634 NextBio:976514 Genevestigator:P06634
GermOnline:YOR204W GO:GO:0033592 Uniprot:P06634
Length = 604
Score = 245 (91.3 bits), Expect = 4.5e-32, Sum P(2) = 4.5e-32
Identities = 49/125 (39%), Positives = 79/125 (63%)
Query: 83 DWLTEKMREANFTVSSMHGDMPQKERDGIMKEFRSGTSRVLITTDVWARGIDVQQVSLVI 142
D LT+ + NF +++HGD Q ER+ + FRSG + +L+ T V ARG+D+ V+ VI
Sbjct: 413 DQLTDFLIMQNFRATAIHGDRTQSERERALAAFRSGAATLLVATAVAARGLDIPNVTHVI 472
Query: 143 NYDLPNNRELYIHRIGRSGRFGRKGVAISFVKSDDIRILRDIEQYYSTQIDEMPMNGKRS 202
NYDLP++ + Y+HRIGR+GR G G+A +F S++ I++ + + + E+P K +
Sbjct: 473 NYDLPSDVDDYVHRIGRTGRAGNTGLATAFFNSENSNIVKGLHEILTEANQEVPSFLKDA 532
Query: 203 LHSYP 207
+ S P
Sbjct: 533 MMSAP 537
Score = 139 (54.0 bits), Expect = 4.5e-32, Sum P(2) = 4.5e-32
Identities = 28/65 (43%), Positives = 43/65 (66%)
Query: 7 ACI--GGTNLSEDLRKLDYGQHVVSGTPGRVFDMIRRRVLRTRNIKMLVLDEADEMLNKG 64
AC+ GG+ + LR+++ G ++ TPGR+ D++ R + N+K LVLDEAD ML+ G
Sbjct: 256 ACVVYGGSPIGNQLREIERGCDLLVATPGRLNDLLERGKISLANVKYLVLDEADRMLDMG 315
Query: 65 FKEQI 69
F+ QI
Sbjct: 316 FEPQI 320
>FB|FBgn0014189 [details] [associations]
symbol:Hel25E "Helicase at 25E" species:7227 "Drosophila
melanogaster" [GO:0005634 "nucleus" evidence=IC;NAS;IDA]
[GO:0006338 "chromatin remodeling" evidence=IMP] [GO:0005700
"polytene chromosome" evidence=IDA] [GO:0004004 "ATP-dependent RNA
helicase activity" evidence=ISS;NAS] [GO:0003724 "RNA helicase
activity" evidence=ISS] [GO:0000398 "mRNA splicing, via
spliceosome" evidence=ISS] [GO:0005681 "spliceosomal complex"
evidence=ISS] [GO:0006406 "mRNA export from nucleus" evidence=IMP]
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0000381 "regulation of alternative mRNA
splicing, via spliceosome" evidence=IMP] [GO:0007052 "mitotic
spindle organization" evidence=IMP] [GO:0005875 "microtubule
associated complex" evidence=IDA] InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0005875 GO:GO:0007052
EMBL:AE014134 GO:GO:0016607 GO:GO:0005681 GO:GO:0003723
GO:GO:0006406 GO:GO:0000398 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0004004 GO:GO:0000381 eggNOG:COG0513
InterPro:IPR014014 PROSITE:PS51195 GeneTree:ENSGT00660000095549
KO:K12812 EMBL:X79802 EMBL:L06018 EMBL:AY118921 PIR:S51601
RefSeq:NP_723089.1 RefSeq:NP_723090.1 RefSeq:NP_723091.1
UniGene:Dm.3332 ProteinModelPortal:Q27268 SMR:Q27268 DIP:DIP-20199N
IntAct:Q27268 MINT:MINT-304772 STRING:Q27268 PaxDb:Q27268
PRIDE:Q27268 EnsemblMetazoa:FBtr0079123 EnsemblMetazoa:FBtr0079124
EnsemblMetazoa:FBtr0079125 GeneID:33781 KEGG:dme:Dmel_CG7269
CTD:33781 FlyBase:FBgn0014189 InParanoid:Q27268 OMA:ENRFLEE
OrthoDB:EOG47WM45 PhylomeDB:Q27268 GenomeRNAi:33781 NextBio:785218
Bgee:Q27268 GermOnline:CG7269 Uniprot:Q27268
Length = 424
Score = 249 (92.7 bits), Expect = 5.2e-32, Sum P(2) = 5.2e-32
Identities = 42/113 (37%), Positives = 76/113 (67%)
Query: 85 LTEKMREANFTVSSMHGDMPQKERDGIMKEFRSGTSRVLITTDVWARGIDVQQVSLVINY 144
L++ + E NF +H M Q+ER ++F+ R+L+ T+++ RG+D+++V++V NY
Sbjct: 300 LSQLLTEQNFPAIGIHRGMTQEERLNRYQQFKDFQKRILVATNLFGRGMDIERVNIVFNY 359
Query: 145 DLPNNRELYIHRIGRSGRFGRKGVAISFVKSD-DIRILRDIEQYYSTQIDEMP 196
D+P + + Y+HR+ R+GRFG KG+AI+FV + D +IL +++ + I E+P
Sbjct: 360 DMPEDSDTYLHRVARAGRFGTKGLAITFVSDENDAKILNEVQDRFDVNISELP 412
Score = 125 (49.1 bits), Expect = 5.2e-32, Sum P(2) = 5.2e-32
Identities = 27/75 (36%), Positives = 42/75 (56%)
Query: 10 GGTNLSEDLRKLDYGQ-HVVSGTPGRVFDMIRRRVLRTRNIKMLVLDEADEMLNK-GFKE 67
GG + +D L G H+V GTPGR+ +IR + L + +K VLDE D+ML + +
Sbjct: 147 GGMAIQKDEETLKSGTPHIVVGTPGRILALIRNKKLNLKLLKHFVLDECDKMLEQLDMRR 206
Query: 68 QIYDVYRYLPPATQV 82
+ +++R P QV
Sbjct: 207 DVQEIFRSTPHGKQV 221
>UNIPROTKB|O00148 [details] [associations]
symbol:DDX39A "ATP-dependent RNA helicase DDX39A"
species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005515
"protein binding" evidence=IPI] [GO:0006406 "mRNA export from
nucleus" evidence=IGI] [GO:0000398 "mRNA splicing, via spliceosome"
evidence=IGI] [GO:0005634 "nucleus" evidence=IDA] [GO:0005737
"cytoplasm" evidence=IDA] InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS51194 SMART:SM00490
GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0003676
GO:GO:0006406 GO:GO:0000398 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 EMBL:U90426 EMBL:AK026614 EMBL:BC001009
IPI:IPI00940237 RefSeq:NP_005795.2 UniGene:Hs.311609
ProteinModelPortal:O00148 SMR:O00148 IntAct:O00148
MINT:MINT-1035991 STRING:O00148 PhosphoSite:O00148 PaxDb:O00148
PeptideAtlas:O00148 PRIDE:O00148 DNASU:10212
Ensembl:ENST00000242776 GeneID:10212 KEGG:hsa:10212 UCSC:uc002myo.3
CTD:10212 GeneCards:GC19M014521 HGNC:HGNC:17821 neXtProt:NX_O00148
PharmGKB:PA27226 HOVERGEN:HBG107334 InParanoid:O00148 KO:K13182
OrthoDB:EOG4XSKPX PhylomeDB:O00148 ChiTaRS:DDX39A GenomeRNAi:10212
NextBio:38664 ArrayExpress:O00148 Bgee:O00148 CleanEx:HS_DDX39
Genevestigator:O00148 GermOnline:ENSG00000123136 Uniprot:O00148
Length = 427
Score = 247 (92.0 bits), Expect = 5.9e-32, Sum P(2) = 5.9e-32
Identities = 42/113 (37%), Positives = 76/113 (67%)
Query: 85 LTEKMREANFTVSSMHGDMPQKERDGIMKEFRSGTSRVLITTDVWARGIDVQQVSLVINY 144
L + + E NF ++H M Q+ER ++F+ R+L+ T+++ RG+D+++V++V NY
Sbjct: 302 LAQLLVEQNFPAIAIHRGMAQEERLSRYQQFKDFQRRILVATNLFGRGMDIERVNIVFNY 361
Query: 145 DLPNNRELYIHRIGRSGRFGRKGVAISFVKSD-DIRILRDIEQYYSTQIDEMP 196
D+P + + Y+HR+ R+GRFG KG+AI+FV + D +IL D++ + + E+P
Sbjct: 362 DMPEDSDTYLHRVARAGRFGTKGLAITFVSDENDAKILNDVQDRFEVNVAELP 414
Score = 127 (49.8 bits), Expect = 5.9e-32, Sum P(2) = 5.9e-32
Identities = 27/82 (32%), Positives = 44/82 (53%)
Query: 2 NVQCHACIGGTNLSEDLRKLDYG-QHVVSGTPGRVFDMIRRRVLRTRNIKMLVLDEADEM 60
+V+ GG ++ +D L HVV GTPGR+ ++R R +N+K VLDE D+M
Sbjct: 141 SVKVSVFFGGLSIKKDEEVLKKNCPHVVVGTPGRILALVRNRSFSLKNVKHFVLDECDKM 200
Query: 61 LNK-GFKEQIYDVYRYLPPATQ 81
L + + + +++R P Q
Sbjct: 201 LEQLDMRRDVQEIFRLTPHEKQ 222
>UNIPROTKB|F1RVF0 [details] [associations]
symbol:LOC100512980 "Uncharacterized protein" species:9823
"Sus scrofa" [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014
PROSITE:PS51195 GeneTree:ENSGT00530000063236 OMA:ESATTFE
Ensembl:ENSSSCT00000012145 Uniprot:F1RVF0
Length = 462
Score = 264 (98.0 bits), Expect = 5.9e-32, Sum P(2) = 5.9e-32
Identities = 50/118 (42%), Positives = 82/118 (69%)
Query: 84 WLTEKMREANFTVSSMHGDMPQKERDGIMKEFRSGTSRVLITTDVWARGIDVQQVSLVIN 143
WLT +M + VS + G++ +R I++ FR G +VLITT+V ARGIDV+QV++V+N
Sbjct: 332 WLTVEMMQDGHQVSLLRGELTVDQRAAIIQRFRDGKEKVLITTNVCARGIDVKQVTIVVN 391
Query: 144 YDLPNNR------ELYIHRIGRSGRFGRKGVAISFVKSDDIRILRDIEQYYSTQIDEM 195
+DLP N+ E Y+HRIGR+GRFG+KG+A + ++ D + +L I+ ++++ I ++
Sbjct: 392 FDLPVNQAEEPDYETYLHRIGRTGRFGKKGLAFNMIEVDKLPLLMKIQDHFNSNIKQL 449
Score = 111 (44.1 bits), Expect = 5.9e-32, Sum P(2) = 5.9e-32
Identities = 28/84 (33%), Positives = 46/84 (54%)
Query: 1 MNVQCHACIGGTNLSEDLRKLDYGQHVVSGTPGRVFDM-IRRRVLRTRNIKMLVLDEADE 59
++VQ I G + R D + ++ GTPG V D +R+++ I++ VLDEAD
Sbjct: 174 VDVQVMYAIRGNRIP---RGTDITKQIIIGTPGTVLDWCFKRKLIDLTKIRVFVLDEADV 230
Query: 60 MLN-KGFKEQIYDVYRYLPPATQV 82
M++ +GF +Q + R LP Q+
Sbjct: 231 MIDTQGFSDQSIRIQRALPSGCQM 254
>TAIR|locus:2162022 [details] [associations]
symbol:AT5G63120 species:3702 "Arabidopsis thaliana"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=ISM] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA;ISS]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0005634 EMBL:CP002688
GenomeReviews:BA000015_GR GO:GO:0000184 GO:GO:0003723
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0006364
EMBL:AB008265 GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 HOGENOM:HOG000268804 KO:K12823 EMBL:AY060589
EMBL:BT000610 EMBL:AK226611 EMBL:AJ010476 IPI:IPI00532778
IPI:IPI00537266 PIR:T51349 RefSeq:NP_568964.1 RefSeq:NP_974985.1
UniGene:At.27361 ProteinModelPortal:Q8W4R3 SMR:Q8W4R3 PaxDb:Q8W4R3
PRIDE:Q8W4R3 EnsemblPlants:AT5G63120.2 GeneID:836432
KEGG:ath:AT5G63120 GeneFarm:979 TAIR:At5g63120 InParanoid:Q8W4R3
OMA:FTHANAK PhylomeDB:Q8W4R3 ProtClustDB:CLSN2690069
Genevestigator:Q8W4R3 GermOnline:AT5G63120 Uniprot:Q8W4R3
Length = 591
Score = 253 (94.1 bits), Expect = 6.1e-32, Sum P(2) = 6.1e-32
Identities = 46/102 (45%), Positives = 68/102 (66%)
Query: 83 DWLTEKMREANFTVSSMHGDMPQKERDGIMKEFRSGTSRVLITTDVWARGIDVQQVSLVI 142
D +T ++R + ++HGD Q ERD ++ EF+SG S ++ TDV ARG+DV+ + V+
Sbjct: 424 DQVTRQLRMDGWPALAIHGDKTQSERDRVLAEFKSGRSPIMTATDVAARGLDVKDIKCVV 483
Query: 143 NYDLPNNRELYIHRIGRSGRFGRKGVAISFVKSDDIRILRDI 184
NYD PN E YIHRIGR+GR G KG+A +F D+ + R++
Sbjct: 484 NYDFPNTLEDYIHRIGRTGRAGAKGMAFTFFTHDNAKFAREL 525
Score = 129 (50.5 bits), Expect = 6.1e-32, Sum P(2) = 6.1e-32
Identities = 32/86 (37%), Positives = 44/86 (51%)
Query: 8 CI-GGTNLSEDLRKLDYGQHVVSGTPGRVFDMIRRRVLRTRNIKMLVLDEADEMLNKGFK 66
CI GG +R L G +V TPGR+ DM+ + + + LVLDEAD ML+ GF+
Sbjct: 271 CIYGGAPKGPQIRDLRRGVEIVIATPGRLIDMLECQHTNLKRVTYLVLDEADRMLDMGFE 330
Query: 67 EQIYDVYRYLPPATQ-VDWLTEKMRE 91
QI + + P Q + W RE
Sbjct: 331 PQIRKIVSQIRPDRQTLLWSATWPRE 356
>UNIPROTKB|Q9DGP9 [details] [associations]
symbol:deadsouth "ATP-dependent RNA helicase DDX25"
species:8355 "Xenopus laevis" [GO:0003723 "RNA binding"
evidence=ISS] [GO:0003724 "RNA helicase activity" evidence=ISS]
[GO:0006200 "ATP catabolic process" evidence=ISS] [GO:0008150
"biological_process" evidence=ND] [GO:0016887 "ATPase activity"
evidence=ISS] [GO:0032019 "mitochondrial cloud" evidence=IDA]
[GO:0045495 "pole plasm" evidence=IDA] [GO:0043186 "P granule"
evidence=IDA] InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270
Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490
GO:GO:0005524 GO:GO:0005634 GO:GO:0016887 GO:GO:0003723
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
GO:GO:0045495 GO:GO:0003724 InterPro:IPR014014 PROSITE:PS51195
GO:GO:0032019 HSSP:Q9UHL0 HOVERGEN:HBG107989 CTD:29118
EMBL:AF190623 RefSeq:NP_001082017.1 UniGene:Xl.670
ProteinModelPortal:Q9DGP9 SMR:Q9DGP9 PRIDE:Q9DGP9 GeneID:398180
KEGG:xla:398180 Xenbase:XB-GENE-958142 Uniprot:Q9DGP9
Length = 483
Score = 276 (102.2 bits), Expect = 6.4e-32, Sum P(2) = 6.4e-32
Identities = 50/118 (42%), Positives = 87/118 (73%)
Query: 84 WLTEKMREANFTVSSMHGDMPQKERDGIMKEFRSGTSRVLITTDVWARGIDVQQVSLVIN 143
WL++K+ + V+ + G++P +R +++ FR G +VL+TT+V ARGIDV+QVS+V+N
Sbjct: 353 WLSQKLSDDGHQVALLSGELPVYDRADMIQRFREGREKVLVTTNVCARGIDVEQVSIVVN 412
Query: 144 YDLPNNR------ELYIHRIGRSGRFGRKGVAISFVKSDDIRILRDIEQYYSTQIDEM 195
+DLP N E Y+HRIGR+GRFG+KG+A+S +++ + +L++IE +++T+I ++
Sbjct: 413 FDLPVNVDGSVDFETYLHRIGRTGRFGKKGIAVSLIENFFVYMLKEIEDHFNTKITKL 470
Score = 99 (39.9 bits), Expect = 6.4e-32, Sum P(2) = 6.4e-32
Identities = 23/58 (39%), Positives = 34/58 (58%)
Query: 27 VVSGTPGRVFDM-IRRRVLRTRNIKMLVLDEADEMLN-KGFKEQIYDVYRYLPPATQV 82
+V GTPG V D + R++ NI + VLDEAD M+N +G + V R +P + Q+
Sbjct: 218 IVIGTPGTVLDWCFKLRLITVENISVFVLDEADVMINVQGHSDHSVRVKRSMPKSCQM 275
>ZFIN|ZDB-GENE-040426-1259 [details] [associations]
symbol:ddx39b "DEAD (Asp-Glu-Ala-Asp) box
polypeptide 39B" species:7955 "Danio rerio" [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0016787
"hydrolase activity" evidence=IEA] InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS51194
SMART:SM00490 ZFIN:ZDB-GENE-040426-1259 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 EMBL:BX511233
GO:GO:0008026 eggNOG:COG0513 HOGENOM:HOG000268797
InterPro:IPR014014 PROSITE:PS51195 HSSP:P10081 HOVERGEN:HBG107334
OrthoDB:EOG4XSKPX GeneTree:ENSGT00660000095549 KO:K12812
OMA:NNPLINC EMBL:FP085397 EMBL:BC055240 IPI:IPI00502330
RefSeq:NP_957237.1 UniGene:Dr.5423 SMR:Q7SXU7 STRING:Q7SXU7
Ensembl:ENSDART00000052355 GeneID:393917 KEGG:dre:393917 CTD:393917
InParanoid:Q7SXU7 NextBio:20814893 Uniprot:Q7SXU7
Length = 435
Score = 249 (92.7 bits), Expect = 6.5e-32, Sum P(2) = 6.5e-32
Identities = 43/113 (38%), Positives = 74/113 (65%)
Query: 85 LTEKMREANFTVSSMHGDMPQKERDGIMKEFRSGTSRVLITTDVWARGIDVQQVSLVINY 144
L + + E NF ++H MPQ ER ++F+ R+L+ T+++ RG+D+++V++ NY
Sbjct: 310 LAQLLVEQNFPAIAIHRAMPQDERLARYQQFKDFQRRILVATNLFGRGMDIERVNIAFNY 369
Query: 145 DLPNNRELYIHRIGRSGRFGRKGVAISFVKSD-DIRILRDIEQYYSTQIDEMP 196
D+P + + Y+HR+ R+GRFG KG+AI+FV + D R L D++ + I E+P
Sbjct: 370 DMPEDSDTYLHRVARAGRFGTKGLAITFVSDENDARTLNDVQDRFEVNISELP 422
Score = 125 (49.1 bits), Expect = 6.5e-32, Sum P(2) = 6.5e-32
Identities = 28/83 (33%), Positives = 45/83 (54%)
Query: 2 NVQCHACIGGTNLSEDLRKLDY-GQHVVSGTPGRVFDMIRRRVLRTRNIKMLVLDEADEM 60
+V+ GG ++ +D L HVV GTPGR+ + R + L R+IK +LDE D+M
Sbjct: 149 SVKVAVFFGGLSIKKDEEVLKKESPHVVVGTPGRILALSRNKSLNLRHIKHFILDECDKM 208
Query: 61 LNK-GFKEQIYDVYRYLPPATQV 82
L + + + +++R P QV
Sbjct: 209 LEQLDMRRDVQEIFRMTPHEKQV 231
>UNIPROTKB|Q5ZHZ0 [details] [associations]
symbol:DDX39B "Spliceosome RNA helicase DDX39B"
species:9031 "Gallus gallus" [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005681 "spliceosomal
complex" evidence=IEA] [GO:0006397 "mRNA processing" evidence=IEA]
[GO:0008380 "RNA splicing" evidence=IEA] [GO:0051028 "mRNA
transport" evidence=IEA] [GO:0016607 "nuclear speck" evidence=IEA]
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0008380
GO:GO:0016607 GO:GO:0006397 GO:GO:0005681 GO:GO:0003723
GO:GO:0051028 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195 HOVERGEN:HBG107334
EMBL:AJ720994 IPI:IPI00585240 ProteinModelPortal:Q5ZHZ0 SMR:Q5ZHZ0
Uniprot:Q5ZHZ0
Length = 428
Score = 254 (94.5 bits), Expect = 7.8e-32, Sum P(2) = 7.8e-32
Identities = 43/113 (38%), Positives = 76/113 (67%)
Query: 85 LTEKMREANFTVSSMHGDMPQKERDGIMKEFRSGTSRVLITTDVWARGIDVQQVSLVINY 144
L + + E NF ++H MPQ+ER ++F+ R+L+ T+++ RG+D+++V++ NY
Sbjct: 303 LAQLLVEQNFPAIAIHRGMPQEERLSRYQQFKDFQRRILVATNLFGRGMDIERVNIAFNY 362
Query: 145 DLPNNRELYIHRIGRSGRFGRKGVAISFVKSD-DIRILRDIEQYYSTQIDEMP 196
D+P + + Y+HR+ R+GRFG KG+AI+FV + D +IL D++ + I E+P
Sbjct: 363 DMPEDSDTYLHRVARAGRFGTKGLAITFVSDENDAKILNDVQDRFEVNISELP 415
Score = 118 (46.6 bits), Expect = 7.8e-32, Sum P(2) = 7.8e-32
Identities = 26/83 (31%), Positives = 44/83 (53%)
Query: 2 NVQCHACIGGTNLSEDLRKLDYG-QHVVSGTPGRVFDMIRRRVLRTRNIKMLVLDEADEM 60
+V+ GG + +D L H+V GTPGR+ + R + L ++IK +LDE D+M
Sbjct: 142 SVKVAVFFGGLAVKKDEEVLKKNCPHIVVGTPGRILALARNKSLNLKHIKHFILDECDKM 201
Query: 61 LNK-GFKEQIYDVYRYLPPATQV 82
L + + + +++R P QV
Sbjct: 202 LEQLDMRRDVQEIFRMTPHEKQV 224
>UNIPROTKB|Q2TBP1 [details] [associations]
symbol:DDX25 "ATP-dependent RNA helicase DDX25"
species:9913 "Bos taurus" [GO:0006417 "regulation of translation"
evidence=ISS] [GO:0006406 "mRNA export from nucleus" evidence=ISS]
[GO:0005737 "cytoplasm" evidence=ISS] [GO:0005634 "nucleus"
evidence=ISS] [GO:0005524 "ATP binding" evidence=ISS] [GO:0033391
"chromatoid body" evidence=ISS] [GO:0004004 "ATP-dependent RNA
helicase activity" evidence=ISS] [GO:0007286 "spermatid
development" evidence=ISS] [GO:0007275 "multicellular organismal
development" evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA]
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0007275
GO:GO:0005524 GO:GO:0005634 GO:GO:0006417 GO:GO:0007286
GO:GO:0003723 GO:GO:0006406 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0033391 GO:GO:0004004 eggNOG:COG0513
HOGENOM:HOG000268797 InterPro:IPR014014 PROSITE:PS51195 HSSP:Q9UHL0
HOVERGEN:HBG107989 EMBL:BC109867 IPI:IPI00724449
RefSeq:NP_001033606.1 UniGene:Bt.14611 ProteinModelPortal:Q2TBP1
SMR:Q2TBP1 PRIDE:Q2TBP1 GeneID:508962 KEGG:bta:508962 CTD:29118
InParanoid:Q2TBP1 OrthoDB:EOG4NS3BD NextBio:20868762 Uniprot:Q2TBP1
Length = 483
Score = 263 (97.6 bits), Expect = 8.6e-32, Sum P(2) = 8.6e-32
Identities = 50/118 (42%), Positives = 82/118 (69%)
Query: 84 WLTEKMREANFTVSSMHGDMPQKERDGIMKEFRSGTSRVLITTDVWARGIDVQQVSLVIN 143
WLT +M + VS + G++ +R I++ FR G +VLITT+V ARGIDV+QV++V+N
Sbjct: 353 WLTVEMMQDGHQVSLLSGELTVDQRASIIQRFRDGKEKVLITTNVCARGIDVKQVTIVVN 412
Query: 144 YDLPNNR------ELYIHRIGRSGRFGRKGVAISFVKSDDIRILRDIEQYYSTQIDEM 195
+DLP N+ E Y+HRIGR+GRFG+KG+A + ++ D + +L I+ ++++ I ++
Sbjct: 413 FDLPVNQAEEPDYETYLHRIGRTGRFGKKGLAFNMIEVDKLPLLMKIQDHFNSSIKQL 470
Score = 112 (44.5 bits), Expect = 8.6e-32, Sum P(2) = 8.6e-32
Identities = 29/84 (34%), Positives = 47/84 (55%)
Query: 1 MNVQCHACIGGTNLSEDLRKLDYGQHVVSGTPGRVFDM-IRRRVLRTRNIKMLVLDEADE 59
++VQ I G + R D + +V GTPG V D +R+++ I++ VLDEAD
Sbjct: 195 VDVQVMYAIRGNRIP---RGTDVTKQIVIGTPGTVLDWCFKRKLIDLTKIRVFVLDEADV 251
Query: 60 MLN-KGFKEQIYDVYRYLPPATQV 82
M++ +GF++Q + R LP Q+
Sbjct: 252 MIDTQGFEDQSIRIQRALPSECQM 275
>TIGR_CMR|DET_0183 [details] [associations]
symbol:DET_0183 "ATP-dependent RNA helicase, DEAD/DEAH box
family" species:243164 "Dehalococcoides ethenogenes 195"
[GO:0008026 "ATP-dependent helicase activity" evidence=ISS]
[GO:0008152 "metabolic process" evidence=ISS] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 EMBL:CP000027 GenomeReviews:CP000027_GR
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
HOGENOM:HOG000268807 RefSeq:YP_180931.1 ProteinModelPortal:Q3ZA18
STRING:Q3ZA18 GeneID:3230538 KEGG:det:DET0183 PATRIC:21607443
OMA:NFAPAVM ProtClustDB:CLSK837629
BioCyc:DETH243164:GJNF-183-MONOMER Uniprot:Q3ZA18
Length = 560
Score = 257 (95.5 bits), Expect = 9.1e-32, Sum P(2) = 9.1e-32
Identities = 47/115 (40%), Positives = 76/115 (66%)
Query: 85 LTEKMREANFTVSSMHGDMPQKERDGIMKEFRSGTSRVLITTDVWARGIDVQQVSLVINY 144
L +++ A FT +S+ G++ Q R +M+ FR G ++L+ TD+ ARG+D+ +S VINY
Sbjct: 255 LADEISRAGFTTASLQGNLSQNRRHAVMEGFRRGNFKILVATDIAARGLDIDHISHVINY 314
Query: 145 DLPNNRELYIHRIGRSGRFGRKGVAISFVKSDDIRILRDIEQYYSTQIDEMPMNG 199
D+P+ E Y HRIGR+GRF R G A+S V D ++RDI++ ++ I + ++G
Sbjct: 315 DMPDTPEDYTHRIGRTGRFDRTGQALSLVTGRDGDMVRDIQKLINSPIQRLRVDG 369
Score = 122 (48.0 bits), Expect = 9.1e-32, Sum P(2) = 9.1e-32
Identities = 25/73 (34%), Positives = 41/73 (56%)
Query: 4 QCHACIGGTNLSEDLRKLDYGQHVVSGTPGRVFDMIRRRVLRTRNIKMLVLDEADEMLNK 63
+C + GG N+ + +R+L G VV PGR+ D I R + ++ L++DEAD M +
Sbjct: 101 EC-SIYGGVNMDQQIRRLRSGVDVVVACPGRLLDHIWRGTIDICGVETLIIDEADRMFDM 159
Query: 64 GFKEQIYDVYRYL 76
GF+ I + + L
Sbjct: 160 GFQPDIQSILKCL 172
Score = 36 (17.7 bits), Expect = 4.8e-05, Sum P(2) = 4.8e-05
Identities = 14/48 (29%), Positives = 25/48 (52%)
Query: 163 FGRK-GVAISFVKSDDIRILRDIEQYYSTQIDEMPMNGKRSLHSYPAR 209
FGR+ GV +++ R + + + +S++ NGK S + PAR
Sbjct: 493 FGRETGVT----SAENTRSVSENPEQFSSRRPAR-FNGKASFANRPAR 535
>UNIPROTKB|Q48AV0 [details] [associations]
symbol:CPS_0042 "ATP-dependent RNA helicase, DEAD box
family" species:167879 "Colwellia psychrerythraea 34H" [GO:0004004
"ATP-dependent RNA helicase activity" evidence=ISS] [GO:0016070
"RNA metabolic process" evidence=ISS] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 EMBL:CP000083 GenomeReviews:CP000083_GR GO:GO:0016070
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0004004
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
HOGENOM:HOG000268807 RefSeq:YP_266818.1 ProteinModelPortal:Q48AV0
GeneID:3521124 KEGG:cps:CPS_0042 PATRIC:21463513 OMA:AITESAY
BioCyc:CPSY167879:GI48-153-MONOMER Uniprot:Q48AV0
Length = 420
Score = 222 (83.2 bits), Expect = 9.8e-32, Sum P(2) = 9.8e-32
Identities = 47/110 (42%), Positives = 67/110 (60%)
Query: 83 DWLTEKMREANFTVSSMHGDMPQKERDGIMKEFRSGTSRVLITTDVWARGIDVQQVSLVI 142
D L ++M + ++HGD Q R+ + EF+ G R LI TDV ARGID++ +S VI
Sbjct: 260 DDLAKEMTKDGVKSLAIHGDKSQGAREKALHEFKEGKVRALIATDVAARGIDIKGLSHVI 319
Query: 143 NYDLPNNRELYIHRIGRSGRFGRKGVAISFVKSDDIRILRDIEQYYSTQI 192
NY+LP N E Y+HRIGR+ R G G+A+S V + +L IE+ Q+
Sbjct: 320 NYELPYNAEDYVHRIGRTARAGNSGLAVSLVSPGEEWLLTAIEELLDIQL 369
Score = 152 (58.6 bits), Expect = 9.8e-32, Sum P(2) = 9.8e-32
Identities = 29/72 (40%), Positives = 44/72 (61%)
Query: 10 GGTNLSEDLRKLDYGQHVVSGTPGRVFDMIRRRVLRTRNIKMLVLDEADEMLNKGFKEQI 69
GG + + + +L G ++ TPGR+ D++R + NI+ LV DEAD ML+ GFKE+I
Sbjct: 112 GGVSTKKQISELKVGVDILIATPGRLLDLLRTESVSLSNIETLVFDEADRMLDMGFKEEI 171
Query: 70 YDVYRYLPPATQ 81
+ +YLP Q
Sbjct: 172 DQITQYLPKTKQ 183
>TIGR_CMR|CPS_0042 [details] [associations]
symbol:CPS_0042 "ATP-dependent RNA helicase, DEAD box
family" species:167879 "Colwellia psychrerythraea 34H" [GO:0004004
"ATP-dependent RNA helicase activity" evidence=ISS] [GO:0016070
"RNA metabolic process" evidence=ISS] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 EMBL:CP000083 GenomeReviews:CP000083_GR GO:GO:0016070
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0004004
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
HOGENOM:HOG000268807 RefSeq:YP_266818.1 ProteinModelPortal:Q48AV0
GeneID:3521124 KEGG:cps:CPS_0042 PATRIC:21463513 OMA:AITESAY
BioCyc:CPSY167879:GI48-153-MONOMER Uniprot:Q48AV0
Length = 420
Score = 222 (83.2 bits), Expect = 9.8e-32, Sum P(2) = 9.8e-32
Identities = 47/110 (42%), Positives = 67/110 (60%)
Query: 83 DWLTEKMREANFTVSSMHGDMPQKERDGIMKEFRSGTSRVLITTDVWARGIDVQQVSLVI 142
D L ++M + ++HGD Q R+ + EF+ G R LI TDV ARGID++ +S VI
Sbjct: 260 DDLAKEMTKDGVKSLAIHGDKSQGAREKALHEFKEGKVRALIATDVAARGIDIKGLSHVI 319
Query: 143 NYDLPNNRELYIHRIGRSGRFGRKGVAISFVKSDDIRILRDIEQYYSTQI 192
NY+LP N E Y+HRIGR+ R G G+A+S V + +L IE+ Q+
Sbjct: 320 NYELPYNAEDYVHRIGRTARAGNSGLAVSLVSPGEEWLLTAIEELLDIQL 369
Score = 152 (58.6 bits), Expect = 9.8e-32, Sum P(2) = 9.8e-32
Identities = 29/72 (40%), Positives = 44/72 (61%)
Query: 10 GGTNLSEDLRKLDYGQHVVSGTPGRVFDMIRRRVLRTRNIKMLVLDEADEMLNKGFKEQI 69
GG + + + +L G ++ TPGR+ D++R + NI+ LV DEAD ML+ GFKE+I
Sbjct: 112 GGVSTKKQISELKVGVDILIATPGRLLDLLRTESVSLSNIETLVFDEADRMLDMGFKEEI 171
Query: 70 YDVYRYLPPATQ 81
+ +YLP Q
Sbjct: 172 DQITQYLPKTKQ 183
>RGD|68381 [details] [associations]
symbol:Ddx25 "DEAD (Asp-Glu-Ala-Asp) box helicase 25"
species:10116 "Rattus norvegicus" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0003723 "RNA binding" evidence=IDA] [GO:0003724
"RNA helicase activity" evidence=IDA] [GO:0004004 "ATP-dependent RNA
helicase activity" evidence=IEA;ISO;ISS] [GO:0005524 "ATP binding"
evidence=IEA;ISO;ISS] [GO:0005634 "nucleus" evidence=IEA;ISO;IDA]
[GO:0005737 "cytoplasm" evidence=ISO;IDA] [GO:0006200 "ATP catabolic
process" evidence=ISO;IDA] [GO:0006406 "mRNA export from nucleus"
evidence=IEA;ISO;ISS] [GO:0006417 "regulation of translation"
evidence=IEA;ISO;ISS] [GO:0007275 "multicellular organismal
development" evidence=IEA] [GO:0007286 "spermatid development"
evidence=IEA;ISO;ISS] [GO:0016887 "ATPase activity" evidence=IDA]
[GO:0033391 "chromatoid body" evidence=IEA;ISO;ISS]
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 RGD:68381
GO:GO:0007275 GO:GO:0005524 GO:GO:0005634 GO:GO:0006417
GO:GO:0007286 GO:GO:0003723 GO:GO:0006406 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0033391 GO:GO:0004004
eggNOG:COG0513 HOGENOM:HOG000268797 InterPro:IPR014014
PROSITE:PS51195 HOVERGEN:HBG107989 CTD:29118 OrthoDB:EOG4NS3BD
EMBL:AF142629 IPI:IPI00213497 IPI:IPI00760145 IPI:IPI00760150
RefSeq:NP_113818.2 UniGene:Rn.224821 ProteinModelPortal:Q9QY16
SMR:Q9QY16 STRING:Q9QY16 PRIDE:Q9QY16 GeneID:58856 KEGG:rno:58856
UCSC:RGD:68381 InParanoid:Q9QY16 NextBio:611449 ArrayExpress:Q9QY16
Genevestigator:Q9QY16 GermOnline:ENSRNOG00000012260 Uniprot:Q9QY16
Length = 483
Score = 265 (98.3 bits), Expect = 1.0e-31, Sum P(2) = 1.0e-31
Identities = 50/118 (42%), Positives = 83/118 (70%)
Query: 84 WLTEKMREANFTVSSMHGDMPQKERDGIMKEFRSGTSRVLITTDVWARGIDVQQVSLVIN 143
WLT +M + VS + G++ ++R I++ FR G +VLITT+V ARGIDV+QV++V+N
Sbjct: 353 WLTVEMMQDGHQVSLLSGELTVEQRASIIQRFRDGKEKVLITTNVCARGIDVKQVTIVVN 412
Query: 144 YDLPNNR------ELYIHRIGRSGRFGRKGVAISFVKSDDIRILRDIEQYYSTQIDEM 195
+DLP N+ E Y+HRIGR+GRFG+KG+A + ++ D + +L I+ ++++ I ++
Sbjct: 413 FDLPVNQSEEPDYETYLHRIGRTGRFGKKGLAFNMIEVDKLPLLMKIQDHFNSSIKQL 470
Score = 109 (43.4 bits), Expect = 1.0e-31, Sum P(2) = 1.0e-31
Identities = 25/66 (37%), Positives = 39/66 (59%)
Query: 19 RKLDYGQHVVSGTPGRVFDM-IRRRVLRTRNIKMLVLDEADEMLN-KGFKEQIYDVYRYL 76
R D + +V GTPG V D +R+++ I++ VLDEAD M++ +GF +Q + R L
Sbjct: 210 RGTDVTKQIVIGTPGTVLDWCFKRKLIDLTKIRVFVLDEADVMIDTQGFSDQSIRIQRAL 269
Query: 77 PPATQV 82
P Q+
Sbjct: 270 PSECQM 275
>UNIPROTKB|F1MSI6 [details] [associations]
symbol:DDX25 "ATP-dependent RNA helicase DDX25"
species:9913 "Bos taurus" [GO:0033391 "chromatoid body"
evidence=IEA] [GO:0007286 "spermatid development" evidence=IEA]
[GO:0006417 "regulation of translation" evidence=IEA] [GO:0006406
"mRNA export from nucleus" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0004004
"ATP-dependent RNA helicase activity" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0005634 GO:GO:0006417
GO:GO:0007286 GO:GO:0003676 GO:GO:0006406 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0033391 GO:GO:0004004
InterPro:IPR014014 PROSITE:PS51195 GeneTree:ENSGT00530000063236
IPI:IPI00724449 OMA:WHFAERI EMBL:DAAA02063102
Ensembl:ENSBTAT00000005587 Uniprot:F1MSI6
Length = 483
Score = 264 (98.0 bits), Expect = 1.1e-31, Sum P(2) = 1.1e-31
Identities = 51/118 (43%), Positives = 81/118 (68%)
Query: 84 WLTEKMREANFTVSSMHGDMPQKERDGIMKEFRSGTSRVLITTDVWARGIDVQQVSLVIN 143
WLT +M + VS + G++ +R I++ FR G +VLITT+V ARGIDV+QV++V+N
Sbjct: 353 WLTVEMMQDGHQVSLLSGELTVDQRASIIQRFRDGKEKVLITTNVCARGIDVKQVTIVVN 412
Query: 144 YDLPNNR------ELYIHRIGRSGRFGRKGVAISFVKSDDIRILRDIEQYYSTQIDEM 195
+DLP N+ E Y+HRIGR+GRFG+KG+A + ++ D + +L I+ ++S I ++
Sbjct: 413 FDLPVNQAEEPDYETYLHRIGRTGRFGKKGLAFNMIEVDKLPLLMKIQDHFSENIKQL 470
Score = 110 (43.8 bits), Expect = 1.1e-31, Sum P(2) = 1.1e-31
Identities = 29/84 (34%), Positives = 46/84 (54%)
Query: 1 MNVQCHACIGGTNLSEDLRKLDYGQHVVSGTPGRVFDM-IRRRVLRTRNIKMLVLDEADE 59
++VQ I G + R D + +V GTPG V D +R+++ I++ VLDEAD
Sbjct: 195 VDVQVMYAIRGNRIP---RGTDVTKQIVIGTPGTVLDWCFKRKLIDLTKIRVFVLDEADV 251
Query: 60 MLN-KGFKEQIYDVYRYLPPATQV 82
M++ +GF +Q + R LP Q+
Sbjct: 252 MIDTQGFADQSIRIQRALPSECQM 275
>UNIPROTKB|F1MBQ8 [details] [associations]
symbol:DDX5 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0072332 "intrinsic apoptotic signaling pathway by p53
class mediator" evidence=IEA] [GO:0071013 "catalytic step 2
spliceosome" evidence=IEA] [GO:0060765 "regulation of androgen
receptor signaling pathway" evidence=IEA] [GO:0050681 "androgen
receptor binding" evidence=IEA] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=IEA]
[GO:0043517 "positive regulation of DNA damage response, signal
transduction by p53 class mediator" evidence=IEA] [GO:0036002
"pre-mRNA binding" evidence=IEA] [GO:0033148 "positive regulation
of intracellular estrogen receptor signaling pathway" evidence=IEA]
[GO:0030331 "estrogen receptor binding" evidence=IEA] [GO:0007623
"circadian rhythm" evidence=IEA] [GO:0005730 "nucleolus"
evidence=IEA] [GO:0003713 "transcription coactivator activity"
evidence=IEA] [GO:0001701 "in utero embryonic development"
evidence=IEA] [GO:0000381 "regulation of alternative mRNA splicing,
via spliceosome" evidence=IEA] [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0003724 "RNA helicase
activity" evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 InterPro:IPR012587 Pfam:PF00270 Pfam:PF00271
Pfam:PF08061 PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490
GO:GO:0005524 GO:GO:0005730 GO:GO:0001701 GO:GO:0045944
GO:GO:0000122 GO:GO:0003713 GO:GO:0033148 GO:GO:0043517
GO:GO:0060765 GO:GO:0072332 GO:GO:0071013 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 GO:GO:0000381
GO:GO:0003724 InterPro:IPR014014 PROSITE:PS51195 GO:GO:0036002
KO:K12823 OMA:IDAMSGY GeneTree:ENSGT00660000095174 CTD:1655
EMBL:DAAA02049347 IPI:IPI01002739 RefSeq:NP_001178324.1
UniGene:Bt.64934 ProteinModelPortal:F1MBQ8 SMR:F1MBQ8 PRIDE:F1MBQ8
Ensembl:ENSBTAT00000024514 GeneID:533700 KEGG:bta:533700
NextBio:20876124 ArrayExpress:F1MBQ8 Uniprot:F1MBQ8
Length = 614
Score = 245 (91.3 bits), Expect = 1.1e-31, Sum P(3) = 1.1e-31
Identities = 47/102 (46%), Positives = 67/102 (65%)
Query: 83 DWLTEKMREANFTVSSMHGDMPQKERDGIMKEFRSGTSRVLITTDVWARGIDVQQVSLVI 142
D LT KMR + +HGD Q+ERD ++ EF+ G + +LI TDV +RG+DV+ V VI
Sbjct: 355 DELTRKMRRDGWPAMGIHGDKSQQERDWVLNEFKHGKAPILIATDVASRGLDVEDVKFVI 414
Query: 143 NYDLPNNRELYIHRIGRSGRFGRKGVAISFVKSDDIRILRDI 184
NYD PN+ E YIHRIGR+ R + G A +F ++I+ + D+
Sbjct: 415 NYDYPNSSEDYIHRIGRTARSTKTGTAYTFFTPNNIKQVSDL 456
Score = 118 (46.6 bits), Expect = 1.1e-31, Sum P(3) = 1.1e-31
Identities = 28/75 (37%), Positives = 37/75 (49%)
Query: 8 CI-GGTNLSEDLRKLDYGQHVVSGTPGRVFDMIRRRVLRTRNIKMLVLDEADEMLNKGFK 66
CI GG +R L+ G + TPGR+ D + R LVLDEAD ML+ GF+
Sbjct: 200 CIYGGAPKGPQIRDLERGVEICIATPGRLIDFLECGKTNLRRTTYLVLDEADRMLDMGFE 259
Query: 67 EQIYDVYRYLPPATQ 81
QI + + P Q
Sbjct: 260 PQIRKIVDQIRPDRQ 274
Score = 36 (17.7 bits), Expect = 1.1e-31, Sum P(3) = 1.1e-31
Identities = 7/26 (26%), Positives = 12/26 (46%)
Query: 183 DIEQYYSTQIDEMPMNGKRSLHSYPA 208
D Q Y + + M + ++YPA
Sbjct: 572 DSTQQYGSNVPNMHNGMNQQAYAYPA 597
>UNIPROTKB|J3KTA4 [details] [associations]
symbol:DDX5 "Probable ATP-dependent RNA helicase DDX5"
species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0003712 "transcription cofactor activity"
evidence=IEA] [GO:0003724 "RNA helicase activity" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 InterPro:IPR012587 Pfam:PF00270 Pfam:PF00271
Pfam:PF08061 PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490
GO:GO:0005524 GO:GO:0005634 GO:GO:0003676 GO:GO:0003712
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
EMBL:AC009994 GO:GO:0003724 InterPro:IPR014014 PROSITE:PS51195
HGNC:HGNC:2746 ChiTaRS:DDX5 ProteinModelPortal:J3KTA4
Ensembl:ENST00000578804 Uniprot:J3KTA4
Length = 614
Score = 245 (91.3 bits), Expect = 1.1e-31, Sum P(3) = 1.1e-31
Identities = 47/102 (46%), Positives = 67/102 (65%)
Query: 83 DWLTEKMREANFTVSSMHGDMPQKERDGIMKEFRSGTSRVLITTDVWARGIDVQQVSLVI 142
D LT KMR + +HGD Q+ERD ++ EF+ G + +LI TDV +RG+DV+ V VI
Sbjct: 355 DELTRKMRRDGWPAMGIHGDKSQQERDWVLNEFKHGKAPILIATDVASRGLDVEDVKFVI 414
Query: 143 NYDLPNNRELYIHRIGRSGRFGRKGVAISFVKSDDIRILRDI 184
NYD PN+ E YIHRIGR+ R + G A +F ++I+ + D+
Sbjct: 415 NYDYPNSSEDYIHRIGRTARSTKTGTAYTFFTPNNIKQVSDL 456
Score = 118 (46.6 bits), Expect = 1.1e-31, Sum P(3) = 1.1e-31
Identities = 28/75 (37%), Positives = 37/75 (49%)
Query: 8 CI-GGTNLSEDLRKLDYGQHVVSGTPGRVFDMIRRRVLRTRNIKMLVLDEADEMLNKGFK 66
CI GG +R L+ G + TPGR+ D + R LVLDEAD ML+ GF+
Sbjct: 200 CIYGGAPKGPQIRDLERGVEICIATPGRLIDFLECGKTNLRRTTYLVLDEADRMLDMGFE 259
Query: 67 EQIYDVYRYLPPATQ 81
QI + + P Q
Sbjct: 260 PQIRKIVDQIRPDRQ 274
Score = 36 (17.7 bits), Expect = 1.1e-31, Sum P(3) = 1.1e-31
Identities = 7/26 (26%), Positives = 12/26 (46%)
Query: 183 DIEQYYSTQIDEMPMNGKRSLHSYPA 208
D Q Y + + M + ++YPA
Sbjct: 572 DSTQQYGSNVPNMHNGMNQQAYAYPA 597
>UNIPROTKB|P17844 [details] [associations]
symbol:DDX5 "Probable ATP-dependent RNA helicase DDX5"
species:9606 "Homo sapiens" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0001701 "in utero embryonic development" evidence=IEA]
[GO:0004004 "ATP-dependent RNA helicase activity" evidence=IEA]
[GO:0005516 "calmodulin binding" evidence=IEA] [GO:0007623
"circadian rhythm" evidence=IEA] [GO:0019899 "enzyme binding"
evidence=IEA] [GO:0045069 "regulation of viral genome replication"
evidence=IEA] [GO:0048306 "calcium-dependent protein binding"
evidence=IEA] [GO:0003724 "RNA helicase activity" evidence=IMP;NAS]
[GO:0016049 "cell growth" evidence=NAS] [GO:0005634 "nucleus"
evidence=IDA;NAS] [GO:0071013 "catalytic step 2 spliceosome"
evidence=IDA] [GO:0000398 "mRNA splicing, via spliceosome"
evidence=IC] [GO:0005515 "protein binding" evidence=IPI]
[GO:0043517 "positive regulation of DNA damage response, signal
transduction by p53 class mediator" evidence=IMP] [GO:0072332
"intrinsic apoptotic signaling pathway by p53 class mediator"
evidence=IMP] [GO:0005730 "nucleolus" evidence=IDA] [GO:2001014
"regulation of skeletal muscle cell differentiation" evidence=ISS]
[GO:0045667 "regulation of osteoblast differentiation"
evidence=ISS] [GO:0000122 "negative regulation of transcription
from RNA polymerase II promoter" evidence=IDA] [GO:0050681
"androgen receptor binding" evidence=IDA] [GO:0060765 "regulation
of androgen receptor signaling pathway" evidence=IMP] [GO:0033148
"positive regulation of intracellular estrogen receptor signaling
pathway" evidence=IDA] [GO:0003713 "transcription coactivator
activity" evidence=IDA] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=IDA]
[GO:0030331 "estrogen receptor binding" evidence=IDA] [GO:0036002
"pre-mRNA binding" evidence=IDA] [GO:0000381 "regulation of
alternative mRNA splicing, via spliceosome" evidence=IDA]
[GO:0030529 "ribonucleoprotein complex" evidence=IDA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
InterPro:IPR012587 Pfam:PF00270 Pfam:PF00271 Pfam:PF08061
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0005730 GO:GO:0016049 GO:GO:0001701 GO:GO:0045944
GO:GO:0006351 GO:GO:0000122 GO:GO:0003713 EMBL:CH471109
GO:GO:0033148 GO:GO:0050681 GO:GO:0043517 GO:GO:0030331
GO:GO:0060765 GO:GO:0045667 GO:GO:0072332 GO:GO:0000398
GO:GO:0071013 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0045069 GO:GO:0004004 GO:GO:0000381 eggNOG:COG0513
GO:GO:0003724 InterPro:IPR014014 PROSITE:PS51195 GO:GO:0036002
HOGENOM:HOG000268804 KO:K12823 OMA:IDAMSGY HOVERGEN:HBG015893
GO:GO:2001014 EMBL:X52104 EMBL:AF015812 EMBL:BT006943 EMBL:AB451257
EMBL:BC016027 EMBL:X15729 EMBL:AJ010931 IPI:IPI00017617 PIR:JC1087
RefSeq:NP_004387.1 UniGene:Hs.279806 PDB:3FE2 PDB:4A4D PDBsum:3FE2
PDBsum:4A4D ProteinModelPortal:P17844 SMR:P17844 DIP:DIP-29844N
IntAct:P17844 MINT:MINT-5000516 STRING:P17844 PhosphoSite:P17844
DMDM:129383 SWISS-2DPAGE:P17844 PaxDb:P17844 PeptideAtlas:P17844
PRIDE:P17844 DNASU:1655 Ensembl:ENST00000225792
Ensembl:ENST00000574715 GeneID:1655 KEGG:hsa:1655 UCSC:uc002jej.2
CTD:1655 GeneCards:GC17M062494 HGNC:HGNC:2746 HPA:CAB005868
HPA:HPA020043 MIM:180630 neXtProt:NX_P17844 PharmGKB:PA27228
InParanoid:P17844 OrthoDB:EOG4BVRTM PhylomeDB:P17844 ChiTaRS:DDX5
EvolutionaryTrace:P17844 GenomeRNAi:1655 NextBio:6816
ArrayExpress:P17844 Bgee:P17844 CleanEx:HS_DDX5
Genevestigator:P17844 GermOnline:ENSG00000108654 Uniprot:P17844
Length = 614
Score = 245 (91.3 bits), Expect = 1.1e-31, Sum P(3) = 1.1e-31
Identities = 47/102 (46%), Positives = 67/102 (65%)
Query: 83 DWLTEKMREANFTVSSMHGDMPQKERDGIMKEFRSGTSRVLITTDVWARGIDVQQVSLVI 142
D LT KMR + +HGD Q+ERD ++ EF+ G + +LI TDV +RG+DV+ V VI
Sbjct: 355 DELTRKMRRDGWPAMGIHGDKSQQERDWVLNEFKHGKAPILIATDVASRGLDVEDVKFVI 414
Query: 143 NYDLPNNRELYIHRIGRSGRFGRKGVAISFVKSDDIRILRDI 184
NYD PN+ E YIHRIGR+ R + G A +F ++I+ + D+
Sbjct: 415 NYDYPNSSEDYIHRIGRTARSTKTGTAYTFFTPNNIKQVSDL 456
Score = 118 (46.6 bits), Expect = 1.1e-31, Sum P(3) = 1.1e-31
Identities = 28/75 (37%), Positives = 37/75 (49%)
Query: 8 CI-GGTNLSEDLRKLDYGQHVVSGTPGRVFDMIRRRVLRTRNIKMLVLDEADEMLNKGFK 66
CI GG +R L+ G + TPGR+ D + R LVLDEAD ML+ GF+
Sbjct: 200 CIYGGAPKGPQIRDLERGVEICIATPGRLIDFLECGKTNLRRTTYLVLDEADRMLDMGFE 259
Query: 67 EQIYDVYRYLPPATQ 81
QI + + P Q
Sbjct: 260 PQIRKIVDQIRPDRQ 274
Score = 36 (17.7 bits), Expect = 1.1e-31, Sum P(3) = 1.1e-31
Identities = 7/26 (26%), Positives = 12/26 (46%)
Query: 183 DIEQYYSTQIDEMPMNGKRSLHSYPA 208
D Q Y + + M + ++YPA
Sbjct: 572 DSTQQYGSNVPNMHNGMNQQAYAYPA 597
>UNIPROTKB|Q5R4I9 [details] [associations]
symbol:DDX5 "Probable ATP-dependent RNA helicase DDX5"
species:9601 "Pongo abelii" [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=ISS]
[GO:0000381 "regulation of alternative mRNA splicing, via
spliceosome" evidence=ISS] [GO:0003713 "transcription coactivator
activity" evidence=ISS] [GO:0003724 "RNA helicase activity"
evidence=ISS] [GO:0005730 "nucleolus" evidence=ISS] [GO:0030331
"estrogen receptor binding" evidence=ISS] [GO:0043517 "positive
regulation of DNA damage response, signal transduction by p53 class
mediator" evidence=ISS] [GO:0045667 "regulation of osteoblast
differentiation" evidence=ISS] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=ISS]
[GO:0050681 "androgen receptor binding" evidence=ISS] [GO:0060765
"regulation of androgen receptor signaling pathway" evidence=ISS]
[GO:0072332 "intrinsic apoptotic signaling pathway by p53 class
mediator" evidence=ISS] [GO:2001014 "regulation of skeletal muscle
cell differentiation" evidence=ISS] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 InterPro:IPR012587
Pfam:PF00270 Pfam:PF00271 Pfam:PF08061 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0005730
GO:GO:0008380 GO:GO:0006397 GO:GO:0045944 GO:GO:0006351
GO:GO:0005681 GO:GO:0003723 GO:GO:0000122 GO:GO:0003713
GO:GO:0050681 GO:GO:0043517 GO:GO:0030331 GO:GO:0060765
GO:GO:0045667 GO:GO:0072332 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 GO:GO:0000381 GO:GO:0003724
InterPro:IPR014014 PROSITE:PS51195 KO:K12823 HOVERGEN:HBG015893
GO:GO:2001014 HSSP:P10081 CTD:1655 EMBL:CR861259
RefSeq:NP_001126958.1 UniGene:Pab.18500 ProteinModelPortal:Q5R4I9
PRIDE:Q5R4I9 GeneID:100173977 KEGG:pon:100173977 InParanoid:Q5R4I9
Uniprot:Q5R4I9
Length = 614
Score = 245 (91.3 bits), Expect = 1.1e-31, Sum P(3) = 1.1e-31
Identities = 47/102 (46%), Positives = 67/102 (65%)
Query: 83 DWLTEKMREANFTVSSMHGDMPQKERDGIMKEFRSGTSRVLITTDVWARGIDVQQVSLVI 142
D LT KMR + +HGD Q+ERD ++ EF+ G + +LI TDV +RG+DV+ V VI
Sbjct: 355 DELTRKMRRDGWPAMGIHGDKSQQERDWVLNEFKHGKAPILIATDVASRGLDVEDVKFVI 414
Query: 143 NYDLPNNRELYIHRIGRSGRFGRKGVAISFVKSDDIRILRDI 184
NYD PN+ E YIHRIGR+ R + G A +F ++I+ + D+
Sbjct: 415 NYDYPNSSEDYIHRIGRTARSTKTGTAYTFFTPNNIKQVSDL 456
Score = 118 (46.6 bits), Expect = 1.1e-31, Sum P(3) = 1.1e-31
Identities = 28/75 (37%), Positives = 37/75 (49%)
Query: 8 CI-GGTNLSEDLRKLDYGQHVVSGTPGRVFDMIRRRVLRTRNIKMLVLDEADEMLNKGFK 66
CI GG +R L+ G + TPGR+ D + R LVLDEAD ML+ GF+
Sbjct: 200 CIYGGAPKGPQIRDLERGVEICIATPGRLIDFLECGKTNLRRTTYLVLDEADRMLDMGFE 259
Query: 67 EQIYDVYRYLPPATQ 81
QI + + P Q
Sbjct: 260 PQIRKIVDQIRPDRQ 274
Score = 36 (17.7 bits), Expect = 1.1e-31, Sum P(3) = 1.1e-31
Identities = 7/26 (26%), Positives = 12/26 (46%)
Query: 183 DIEQYYSTQIDEMPMNGKRSLHSYPA 208
D Q Y + + M + ++YPA
Sbjct: 572 DSTQQYGSNVPNMHNGMNQQAYAYPA 597
>POMBASE|SPCC1795.11 [details] [associations]
symbol:sum3 "translation initiation RNA helicase Sum3"
species:4896 "Schizosaccharomyces pombe" [GO:0002183 "cytoplasmic
translational initiation" evidence=IMP] [GO:0003743 "translation
initiation factor activity" evidence=IEA] [GO:0004004
"ATP-dependent RNA helicase activity" evidence=TAS] [GO:0005515
"protein binding" evidence=IPI] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0005829 "cytosol" evidence=IDA] [GO:0007346
"regulation of mitotic cell cycle" evidence=IMP] [GO:0010628
"positive regulation of gene expression" evidence=IMP] [GO:0031047
"gene silencing by RNA" evidence=IDA] [GO:0031137 "regulation of
conjugation with cellular fusion" evidence=IGI] [GO:0071470
"cellular response to osmotic stress" evidence=IMP]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 PomBase:SPCC1795.11 GO:GO:0005829 GO:GO:0005524
GO:GO:0007346 GO:GO:0051301 GO:GO:0007067 EMBL:CU329672
GenomeReviews:CU329672_GR GO:GO:0071470 GO:GO:0010628 GO:GO:0031047
GO:GO:0003743 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0004004 GO:GO:0031137 InterPro:IPR014014 PROSITE:PS51195
GO:GO:0002183 HOGENOM:HOG000268804 KO:K11594 OrthoDB:EOG4XPTQ4
OMA:KYERGGN EMBL:AF025536 EMBL:AF084222 EMBL:AB012389 EMBL:AJ237697
EMBL:AB027871 PIR:T43543 RefSeq:NP_588033.1
ProteinModelPortal:O13370 SMR:O13370 IntAct:O13370
MINT:MINT-4666622 STRING:O13370 PRIDE:O13370
EnsemblFungi:SPCC1795.11.1 GeneID:2538689 KEGG:spo:SPCC1795.11
NextBio:20799875 Uniprot:O13370
Length = 636
Score = 233 (87.1 bits), Expect = 1.3e-31, Sum P(2) = 1.3e-31
Identities = 44/114 (38%), Positives = 73/114 (64%)
Query: 83 DWLTEKMREANFTVSSMHGDMPQKERDGIMKEFRSGTSRVLITTDVWARGIDVQQVSLVI 142
D LT+ + +NF +S+HGD Q+ER+ ++ FRSG + +++ T V +RG+D+ V+ VI
Sbjct: 444 DTLTDYLLNSNFPATSIHGDRTQRERERALELFRSGRTSIMVATAVASRGLDIPNVTHVI 503
Query: 143 NYDLPNNRELYIHRIGRSGRFGRKGVAISFVKSDDIRILRDIEQYYSTQIDEMP 196
NYDLP + + Y+HRIGR+GR G G A++F ++ I +++ + E P
Sbjct: 504 NYDLPTDIDDYVHRIGRTGRAGNTGQAVAFFNRNNKGIAKELIELLQEANQECP 557
Score = 148 (57.2 bits), Expect = 1.3e-31, Sum P(2) = 1.3e-31
Identities = 30/63 (47%), Positives = 42/63 (66%)
Query: 7 ACIGGTNLSEDLRKLDYGQHVVSGTPGRVFDMIRRRVLRTRNIKMLVLDEADEMLNKGFK 66
A GG ++ +R++D G ++S TPGR+ D+I R + NIK LVLDEAD ML+ GF+
Sbjct: 288 AVYGGADIRAQIRQIDQGCDLLSATPGRLVDLIDRGRISLANIKFLVLDEADRMLDMGFE 347
Query: 67 EQI 69
QI
Sbjct: 348 PQI 350
>TIGR_CMR|GSU_0189 [details] [associations]
symbol:GSU_0189 "ATP-dependent RNA helicase DbpA"
species:243231 "Geobacter sulfurreducens PCA" [GO:0004004
"ATP-dependent RNA helicase activity" evidence=ISS] [GO:0016070
"RNA metabolic process" evidence=ISS] [GO:0042254 "ribosome
biogenesis" evidence=ISS] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0003676
EMBL:AE017180 GenomeReviews:AE017180_GR InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014
PROSITE:PS51195 HOGENOM:HOG000268809 KO:K05591 ProtClustDB:PRK11776
InterPro:IPR005580 Pfam:PF03880 RefSeq:NP_951250.1
ProteinModelPortal:Q74GQ7 GeneID:2687824 KEGG:gsu:GSU0189
PATRIC:22023124 OMA:VAIASHC BioCyc:GSUL243231:GH27-128-MONOMER
Uniprot:Q74GQ7
Length = 460
Score = 220 (82.5 bits), Expect = 1.4e-31, Sum P(2) = 1.4e-31
Identities = 39/91 (42%), Positives = 65/91 (71%)
Query: 94 FTVSSMHGDMPQKERDGIMKEFRSGTSRVLITTDVWARGIDVQQVSLVINYDLPNNRELY 153
+ ++HGD+ Q+ERD ++ F + ++ VL+ TDV ARG+D++++S VINY+L N E++
Sbjct: 267 YAALAIHGDLDQRERDRVLVRFANRSASVLVATDVAARGLDIKELSAVINYELTRNPEVH 326
Query: 154 IHRIGRSGRFGRKGVAISFVKSDDIRILRDI 184
HRIGR+GR G +G+A+S V + R++ I
Sbjct: 327 THRIGRTGRAGERGLAVSLVTPRESRLIAAI 357
Score = 155 (59.6 bits), Expect = 1.4e-31, Sum P(2) = 1.4e-31
Identities = 33/80 (41%), Positives = 45/80 (56%)
Query: 2 NVQCHACIGGTNLSEDLRKLDYGQHVVSGTPGRVFDMIRRRVLRTRNIKMLVLDEADEML 61
N++ GG L L++G HVV GTPGR+ D +RR L ++ LVLDEAD ML
Sbjct: 101 NIKILTICGGVPFGPQLGSLEHGAHVVIGTPGRLLDHLRRGSLDLSALRTLVLDEADRML 160
Query: 62 NKGFKEQIYDVYRYLPPATQ 81
+ GF++ I + PP Q
Sbjct: 161 DMGFQDDISALIAAAPPKRQ 180
>FB|FBgn0035720 [details] [associations]
symbol:CG10077 species:7227 "Drosophila melanogaster"
[GO:0003724 "RNA helicase activity" evidence=ISS] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0005875 "microtubule associated complex"
evidence=IDA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0005875
EMBL:AE014296 GO:GO:0006200 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 GO:GO:0003724
InterPro:IPR014014 PROSITE:PS51195 GO:GO:0016779 KO:K12823
GeneTree:ENSGT00660000095174 HSSP:P10081 UniGene:Dm.7301
GeneID:38756 KEGG:dme:Dmel_CG10077 FlyBase:FBgn0035720
ChiTaRS:CG10077 GenomeRNAi:38756 NextBio:810234 EMBL:AY102660
RefSeq:NP_648062.2 SMR:Q8MZI3 IntAct:Q8MZI3 MINT:MINT-863686
STRING:Q8MZI3 EnsemblMetazoa:FBtr0076940 EnsemblMetazoa:FBtr0333083
UCSC:CG10077-RA InParanoid:Q8MZI3 OMA:WRACAIH Uniprot:Q8MZI3
Length = 818
Score = 247 (92.0 bits), Expect = 1.4e-31, Sum P(2) = 1.4e-31
Identities = 51/126 (40%), Positives = 76/126 (60%)
Query: 81 QVDWLTEKMREANFTVSSMHGDMPQKERDGIMKEFRSGTSRVLITTDVWARGIDVQQVSL 140
+VD +T + + ++HGD Q+ERD ++ FR+G +L+ TDV ARG+DV V
Sbjct: 416 RVDEITRNISRQGWRACAIHGDKSQQERDFVLSSFRNGRHSILVATDVAARGLDVDDVKF 475
Query: 141 VINYDLPNNRELYIHRIGRSGRFGRKGVAISFV------KSDD-IRILRDIEQYYSTQID 193
VINYD P+N E Y+HRIGR+GR G A + K++D I++LR+ Q + ++
Sbjct: 476 VINYDYPSNSEDYVHRIGRTGRSNNTGTAYTLFTHSNANKANDLIQVLREANQTINPKLM 535
Query: 194 EMPMNG 199
M MNG
Sbjct: 536 NMAMNG 541
Score = 137 (53.3 bits), Expect = 1.4e-31, Sum P(2) = 1.4e-31
Identities = 30/78 (38%), Positives = 42/78 (53%)
Query: 6 HACI-GGTNLSEDLRKLDYGQHVVSGTPGRVFDMIRRRVLRTRNIKMLVLDEADEMLNKG 64
+ CI GG + R L+ G +V TPGR+ D + R + LVLDEAD ML+ G
Sbjct: 261 NTCIFGGAPKGQQARDLERGVEIVIATPGRLIDFLERGTTSLKRCTYLVLDEADRMLDMG 320
Query: 65 FKEQIYDVYRYLPPATQV 82
F+ QI + + + P QV
Sbjct: 321 FEPQIRKIMQQIRPDRQV 338
>RGD|619906 [details] [associations]
symbol:Ddx5 "DEAD (Asp-Glu-Ala-Asp) box helicase 5" species:10116
"Rattus norvegicus" [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=IEA;ISO]
[GO:0000381 "regulation of alternative mRNA splicing, via
spliceosome" evidence=IEA;ISO] [GO:0001701 "in utero embryonic
development" evidence=IEA;ISO] [GO:0003712 "transcription cofactor
activity" evidence=ISO] [GO:0003713 "transcription coactivator
activity" evidence=IEA;ISO] [GO:0003724 "RNA helicase activity"
evidence=ISO] [GO:0004004 "ATP-dependent RNA helicase activity"
evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005516 "calmodulin binding" evidence=IDA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=ISO]
[GO:0005730 "nucleolus" evidence=IEA;ISO] [GO:0007623 "circadian
rhythm" evidence=IEA;ISO] [GO:0019899 "enzyme binding"
evidence=IDA] [GO:0030331 "estrogen receptor binding"
evidence=IEA;ISO] [GO:0030529 "ribonucleoprotein complex"
evidence=ISO] [GO:0033148 "positive regulation of intracellular
estrogen receptor signaling pathway" evidence=IEA;ISO] [GO:0036002
"pre-mRNA binding" evidence=IEA;ISO] [GO:0043517 "positive
regulation of DNA damage response, signal transduction by p53 class
mediator" evidence=IEA;ISO] [GO:0045069 "regulation of viral genome
replication" evidence=IMP] [GO:0045667 "regulation of osteoblast
differentiation" evidence=ISO] [GO:0045893 "positive regulation of
transcription, DNA-dependent" evidence=ISO] [GO:0045944 "positive
regulation of transcription from RNA polymerase II promoter"
evidence=IEA;ISO] [GO:0048306 "calcium-dependent protein binding"
evidence=IDA] [GO:0050681 "androgen receptor binding"
evidence=IEA;ISO] [GO:0060765 "regulation of androgen receptor
signaling pathway" evidence=IEA;ISO] [GO:0071013 "catalytic step 2
spliceosome" evidence=IEA;ISO] [GO:0072332 "intrinsic apoptotic
signaling pathway by p53 class mediator" evidence=IEA;ISO]
[GO:2001014 "regulation of skeletal muscle cell differentiation"
evidence=ISO] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 InterPro:IPR012587 Pfam:PF00270 Pfam:PF00271
Pfam:PF08061 PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490
RGD:619906 GO:GO:0005524 GO:GO:0005730 GO:GO:0001701 GO:GO:0045944
GO:GO:0019899 GO:GO:0000122 GO:GO:0003713 GO:GO:0005516
GO:GO:0048306 GO:GO:0033148 GO:GO:0043517 GO:GO:0060765
EMBL:CH473948 GO:GO:0072332 GO:GO:0071013 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0045069 GO:GO:0004004
GO:GO:0000381 InterPro:IPR014014 PROSITE:PS51195 GO:GO:0036002
HOGENOM:HOG000268804 KO:K12823 OMA:IDAMSGY
GeneTree:ENSGT00660000095174 HOVERGEN:HBG015893 CTD:1655
EMBL:BC079036 IPI:IPI00464718 RefSeq:NP_001007614.1
UniGene:Rn.162208 IntAct:Q6AYI1 STRING:Q6AYI1
Ensembl:ENSRNOT00000048490 GeneID:287765 KEGG:rno:287765
UCSC:RGD:619906 InParanoid:Q6AYI1 NextBio:626970
Genevestigator:Q6AYI1 Uniprot:Q6AYI1
Length = 615
Score = 245 (91.3 bits), Expect = 1.4e-31, Sum P(3) = 1.4e-31
Identities = 47/102 (46%), Positives = 67/102 (65%)
Query: 83 DWLTEKMREANFTVSSMHGDMPQKERDGIMKEFRSGTSRVLITTDVWARGIDVQQVSLVI 142
D LT KMR + +HGD Q+ERD ++ EF+ G + +LI TDV +RG+DV+ V VI
Sbjct: 355 DELTRKMRRDGWPAMGIHGDKSQQERDWVLNEFKHGKAPILIATDVASRGLDVEDVKFVI 414
Query: 143 NYDLPNNRELYIHRIGRSGRFGRKGVAISFVKSDDIRILRDI 184
NYD PN+ E YIHRIGR+ R + G A +F ++I+ + D+
Sbjct: 415 NYDYPNSSEDYIHRIGRTARSTKTGTAYTFFTPNNIKQVSDL 456
Score = 118 (46.6 bits), Expect = 1.4e-31, Sum P(3) = 1.4e-31
Identities = 28/75 (37%), Positives = 37/75 (49%)
Query: 8 CI-GGTNLSEDLRKLDYGQHVVSGTPGRVFDMIRRRVLRTRNIKMLVLDEADEMLNKGFK 66
CI GG +R L+ G + TPGR+ D + R LVLDEAD ML+ GF+
Sbjct: 200 CIYGGAPKGPQIRDLERGVEICIATPGRLIDFLECGKTNLRRTTYLVLDEADRMLDMGFE 259
Query: 67 EQIYDVYRYLPPATQ 81
QI + + P Q
Sbjct: 260 PQIRKIVDQIRPDRQ 274
Score = 35 (17.4 bits), Expect = 1.4e-31, Sum P(3) = 1.4e-31
Identities = 7/26 (26%), Positives = 12/26 (46%)
Query: 183 DIEQYYSTQIDEMPMNGKRSLHSYPA 208
D Q Y + + M + ++YPA
Sbjct: 572 DSTQQYGSNVANMHNGMNQQAYAYPA 597
>POMBASE|SPBC12C2.06 [details] [associations]
symbol:SPBC12C2.06 "cytoplasmic ATP-dependent RNA
helicase Dbp5 (predicted)" species:4896 "Schizosaccharomyces pombe"
[GO:0002184 "cytoplasmic translational termination" evidence=NAS]
[GO:0003723 "RNA binding" evidence=IEA] [GO:0004004 "ATP-dependent
RNA helicase activity" evidence=ISO] [GO:0005524 "ATP binding"
evidence=IC] [GO:0005635 "nuclear envelope" evidence=IDA]
[GO:0005643 "nuclear pore" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=ISO] [GO:0005829 "cytosol" evidence=IDA] [GO:0006406 "mRNA
export from nucleus" evidence=ISO] [GO:0006415 "translational
termination" evidence=ISO] [GO:0015031 "protein transport"
evidence=IEA] [GO:0031965 "nuclear membrane" evidence=IEA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 PomBase:SPBC12C2.06 GO:GO:0005829 GO:GO:0005524
GO:GO:0005635 GO:GO:0015031 EMBL:CU329671 GO:GO:0031965
GO:GO:0005643 GenomeReviews:CU329671_GR GO:GO:0003723 GO:GO:0006406
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 KO:K01529
GO:GO:0004004 eggNOG:COG0513 HOGENOM:HOG000268797
InterPro:IPR014014 PROSITE:PS51195 OMA:PQAICLA OrthoDB:EOG4B2X5R
PIR:T39375 RefSeq:NP_596016.1 PDB:3FHO PDBsum:3FHO
ProteinModelPortal:Q09747 STRING:Q09747 PRIDE:Q09747
EnsemblFungi:SPBC12C2.06.1 GeneID:2539975 KEGG:spo:SPBC12C2.06
EvolutionaryTrace:Q09747 NextBio:20801118 GO:GO:0002184
Uniprot:Q09747
Length = 503
Score = 248 (92.4 bits), Expect = 1.5e-31, Sum P(2) = 1.5e-31
Identities = 53/126 (42%), Positives = 79/126 (62%)
Query: 85 LTEKMREANFTVSSMHGDMPQKERDGIMKEFRSGTSRVLITTDVWARGIDVQQVSLVINY 144
+ +M TV+ + G++ +RD IM FR GTS+VL+TT+V ARGIDV QV+LV+NY
Sbjct: 368 IARRMTADGHTVACLTGNLEGAQRDAIMDSFRVGTSKVLVTTNVIARGIDVSQVNLVVNY 427
Query: 145 DLPNNR------ELYIHRIGRSGRFGRKGVAISFVKSDDI-RILRDIEQYYSTQIDEMPM 197
D+P ++ + Y+HRIGR+GRFGR GV+I+FV + I++Y+ I +P
Sbjct: 428 DMPLDQAGRPDPQTYLHRIGRTGRFGRVGVSINFVHDKKSWEEMNAIQEYFQRPITRVPT 487
Query: 198 NGKRSL 203
+ L
Sbjct: 488 DDYEEL 493
Score = 127 (49.8 bits), Expect = 1.5e-31, Sum P(2) = 1.5e-31
Identities = 29/64 (45%), Positives = 41/64 (64%)
Query: 20 KLDYGQHVVSGTPGRVFDMIRRRVLRTRNIKMLVLDEADEMLNK-GFKEQIYDVYRYLPP 78
K+D +V GTPG V D+++RR L R+IK+ VLDEAD ML++ G +Q + LP
Sbjct: 228 KID--AQIVIGTPGTVMDLMKRRQLDARDIKVFVLDEADNMLDQQGLGDQSMRIKHLLPR 285
Query: 79 ATQV 82
TQ+
Sbjct: 286 NTQI 289
>UNIPROTKB|F1PEA6 [details] [associations]
symbol:DDX5 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0003724 "RNA helicase
activity" evidence=IEA] [GO:0003712 "transcription cofactor
activity" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 InterPro:IPR012587 Pfam:PF00270 Pfam:PF00271
Pfam:PF08061 PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490
GO:GO:0005524 GO:GO:0005634 GO:GO:0003676 GO:GO:0003712
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
GO:GO:0003724 InterPro:IPR014014 PROSITE:PS51195 OMA:IDAMSGY
GeneTree:ENSGT00660000095174 EMBL:AAEX03006361
Ensembl:ENSCAFT00000018595 Uniprot:F1PEA6
Length = 671
Score = 245 (91.3 bits), Expect = 1.9e-31, Sum P(3) = 1.9e-31
Identities = 47/102 (46%), Positives = 67/102 (65%)
Query: 83 DWLTEKMREANFTVSSMHGDMPQKERDGIMKEFRSGTSRVLITTDVWARGIDVQQVSLVI 142
D LT KMR + +HGD Q+ERD ++ EF+ G + +LI TDV +RG+DV+ V VI
Sbjct: 412 DELTRKMRRDGWPAMGIHGDKSQQERDWVLNEFKHGKAPILIATDVASRGLDVEDVKFVI 471
Query: 143 NYDLPNNRELYIHRIGRSGRFGRKGVAISFVKSDDIRILRDI 184
NYD PN+ E YIHRIGR+ R + G A +F ++I+ + D+
Sbjct: 472 NYDYPNSSEDYIHRIGRTARSTKTGTAYTFFTPNNIKQVSDL 513
Score = 118 (46.6 bits), Expect = 1.9e-31, Sum P(3) = 1.9e-31
Identities = 28/75 (37%), Positives = 37/75 (49%)
Query: 8 CI-GGTNLSEDLRKLDYGQHVVSGTPGRVFDMIRRRVLRTRNIKMLVLDEADEMLNKGFK 66
CI GG +R L+ G + TPGR+ D + R LVLDEAD ML+ GF+
Sbjct: 257 CIYGGAPKGPQIRDLERGVEICIATPGRLIDFLECGKTNLRRTTYLVLDEADRMLDMGFE 316
Query: 67 EQIYDVYRYLPPATQ 81
QI + + P Q
Sbjct: 317 PQIRKIVDQIRPDRQ 331
Score = 36 (17.7 bits), Expect = 1.9e-31, Sum P(3) = 1.9e-31
Identities = 7/26 (26%), Positives = 12/26 (46%)
Query: 183 DIEQYYSTQIDEMPMNGKRSLHSYPA 208
D Q Y + + M + ++YPA
Sbjct: 629 DSTQQYGSNVPNMHNGMNQQAYAYPA 654
>TIGR_CMR|GSU_0491 [details] [associations]
symbol:GSU_0491 "ATP-dependent RNA helicase RhlE"
species:243231 "Geobacter sulfurreducens PCA" [GO:0008026
"ATP-dependent helicase activity" evidence=ISS] [GO:0008152
"metabolic process" evidence=ISS] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 EMBL:AE017180 GenomeReviews:AE017180_GR
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 HOGENOM:HOG000268807
RefSeq:NP_951550.1 ProteinModelPortal:Q74FW1 GeneID:2686040
KEGG:gsu:GSU0491 PATRIC:22023733 OMA:TTHEHIE ProtClustDB:CLSK827872
BioCyc:GSUL243231:GH27-490-MONOMER Uniprot:Q74FW1
Length = 450
Score = 240 (89.5 bits), Expect = 2.8e-31, Sum P(2) = 2.8e-31
Identities = 47/115 (40%), Positives = 71/115 (61%)
Query: 85 LTEKMREANFTVSSMHGDMPQKERDGIMKEFRSGTSRVLITTDVWARGIDVQQVSLVINY 144
L +++ + +++HGDMPQ R+ + + G R+L+ TDV ARG+DV +S VIN+
Sbjct: 260 LALELKAQGHSAAALHGDMPQNARNRTIAAMKQGRIRLLVATDVAARGLDVTGISHVINF 319
Query: 145 DLPNNRELYIHRIGRSGRFGRKGVAISFVKSDDIRILRDIEQYYSTQIDEMPMNG 199
DLP E Y+HRIGR+GR G G+AISF +++ L IE+Y + E + G
Sbjct: 320 DLPKFAEDYVHRIGRTGRAGASGIAISFASLNEVNYLARIERYIGQTLPEHHIPG 374
Score = 130 (50.8 bits), Expect = 2.8e-31, Sum P(2) = 2.8e-31
Identities = 31/81 (38%), Positives = 44/81 (54%)
Query: 1 MNVQCHACIGGTNLSEDLRKLDYGQHVVSGTPGRVFDMIRRRVLRTRNIKMLVLDEADEM 60
M V+ A +GG LR L + TPGR+ D++ RR L +++LVLDEAD M
Sbjct: 100 MRVRSGAILGGMPYHAQLRLLSAPVDFIVATPGRLVDLLDRRSLDLSRLELLVLDEADRM 159
Query: 61 LNKGFKEQIYDVYRYLPPATQ 81
L+ GF + + D PAT+
Sbjct: 160 LDMGFSDDV-DRIAAASPATR 179
>UNIPROTKB|H9KYU4 [details] [associations]
symbol:DDX25 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0004004 "ATP-dependent RNA helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0006406 "mRNA export from nucleus" evidence=IEA]
[GO:0006417 "regulation of translation" evidence=IEA] [GO:0007286
"spermatid development" evidence=IEA] [GO:0033391 "chromatoid body"
evidence=IEA] InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270
Pfam:PF00271 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
GeneTree:ENSGT00530000063236 OMA:WHFAERI EMBL:AADN02053079
Ensembl:ENSGALT00000000632 Uniprot:H9KYU4
Length = 416
Score = 254 (94.5 bits), Expect = 3.1e-31, Sum P(2) = 3.1e-31
Identities = 50/119 (42%), Positives = 79/119 (66%)
Query: 83 DWLTEKMREANFTVSSMHGDMPQKERDGIMKEFRSGTSRVLITTDVWARGIDVQQVSLVI 142
DWL+ KM + V+ + ++ +R +++ FR G +VLITT+V ARGIDV QV++V+
Sbjct: 285 DWLSVKMIQDGHQVAMLTAELSIVQRADVIQRFRDGKEKVLITTNVCARGIDVAQVTIVV 344
Query: 143 NYDLPNNR------ELYIHRIGRSGRFGRKGVAISFVKSDDIRILRDIEQYYSTQIDEM 195
N+ LP NR E Y+HRIGR+GRFG++G+A + V S ++R IE+++ T+I +
Sbjct: 345 NFGLPINRQKQPDFETYLHRIGRTGRFGKRGIAFNMVDSHSAHLVRCIEEHFQTKIKRL 403
Score = 111 (44.1 bits), Expect = 3.1e-31, Sum P(2) = 3.1e-31
Identities = 26/60 (43%), Positives = 36/60 (60%)
Query: 25 QHVVSGTPGRVFDM-IRRRVLRTRNIKMLVLDEADEMLN-KGFKEQIYDVYRYLPPATQV 82
+ +V GTPG + D +RR+L R I M VLDEAD M++ +GF Q + R LP Q+
Sbjct: 149 EQIVIGTPGTMLDWCFKRRLLNMRRICMFVLDEADVMIDTQGFSSQSIRIQRALPKDCQM 208
>MGI|MGI:1353582 [details] [associations]
symbol:Ddx25 "DEAD (Asp-Glu-Ala-Asp) box polypeptide 25"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0003723 "RNA binding" evidence=ISO] [GO:0003724 "RNA helicase
activity" evidence=ISO] [GO:0004004 "ATP-dependent RNA helicase
activity" evidence=IDA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IDA] [GO:0005634
"nucleus" evidence=ISO;IDA] [GO:0005737 "cytoplasm"
evidence=ISO;IDA] [GO:0006200 "ATP catabolic process"
evidence=ISO;IDA] [GO:0006406 "mRNA export from nucleus"
evidence=IDA] [GO:0006417 "regulation of translation" evidence=IDA]
[GO:0006810 "transport" evidence=IEA] [GO:0007275 "multicellular
organismal development" evidence=IEA] [GO:0007283 "spermatogenesis"
evidence=IEA] [GO:0007286 "spermatid development" evidence=IDA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0016887 "ATPase
activity" evidence=ISO] [GO:0030154 "cell differentiation"
evidence=IEA] [GO:0033391 "chromatoid body" evidence=IDA]
[GO:0051028 "mRNA transport" evidence=IEA] InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 MGI:MGI:1353582 GO:GO:0007275
GO:GO:0005524 GO:GO:0005634 GO:GO:0006417 GO:GO:0007286
GO:GO:0003723 GO:GO:0006406 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0033391 GO:GO:0004004 eggNOG:COG0513
HOGENOM:HOG000268797 InterPro:IPR014014 PROSITE:PS51195
GeneTree:ENSGT00530000063236 HOVERGEN:HBG107989 CTD:29118
OrthoDB:EOG4NS3BD OMA:WHFAERI ChiTaRS:DDX25 EMBL:AF142630
EMBL:AY380091 EMBL:AY380080 EMBL:AY380081 EMBL:AY380082
EMBL:AY380083 EMBL:AY380084 EMBL:AY380085 EMBL:AY380086
EMBL:AY380087 EMBL:AY380088 EMBL:AY380089 EMBL:AY380090
EMBL:AK050693 EMBL:AK078340 EMBL:BC024852 EMBL:BC061130
IPI:IPI00135420 IPI:IPI00759935 RefSeq:NP_038960.2
UniGene:Mm.291723 ProteinModelPortal:Q9QY15 SMR:Q9QY15
STRING:Q9QY15 PhosphoSite:Q9QY15 PaxDb:Q9QY15 PRIDE:Q9QY15
Ensembl:ENSMUST00000034612 GeneID:30959 KEGG:mmu:30959
UCSC:uc012gqi.1 InParanoid:Q9QY15 NextBio:307448 Bgee:Q9QY15
CleanEx:MM_DDX25 Genevestigator:Q9QY15
GermOnline:ENSMUSG00000032101 Uniprot:Q9QY15
Length = 484
Score = 265 (98.3 bits), Expect = 3.6e-31, Sum P(2) = 3.6e-31
Identities = 50/118 (42%), Positives = 83/118 (70%)
Query: 84 WLTEKMREANFTVSSMHGDMPQKERDGIMKEFRSGTSRVLITTDVWARGIDVQQVSLVIN 143
WLT +M + VS + G++ ++R I++ FR G +VLITT+V ARGIDV+QV++V+N
Sbjct: 354 WLTVEMMQDGHQVSLLSGELTVEQRASIIQRFRDGKEKVLITTNVCARGIDVKQVTIVVN 413
Query: 144 YDLPNNR------ELYIHRIGRSGRFGRKGVAISFVKSDDIRILRDIEQYYSTQIDEM 195
+DLP N+ E Y+HRIGR+GRFG+KG+A + ++ D + +L I+ ++++ I ++
Sbjct: 414 FDLPVNQSEEPDYETYLHRIGRTGRFGKKGLAFNMIEVDKLPLLMKIQDHFNSNIKQL 471
Score = 104 (41.7 bits), Expect = 3.6e-31, Sum P(2) = 3.6e-31
Identities = 23/66 (34%), Positives = 39/66 (59%)
Query: 19 RKLDYGQHVVSGTPGRVFDM-IRRRVLRTRNIKMLVLDEADEMLN-KGFKEQIYDVYRYL 76
R + + ++ GTPG V D +R+++ I++ VLDEAD M++ +GF +Q + R L
Sbjct: 211 RGTEVTKQIIIGTPGTVLDWCFKRKLIDLTKIRVFVLDEADVMIDTQGFSDQSIRIQRAL 270
Query: 77 PPATQV 82
P Q+
Sbjct: 271 PSECQM 276
>UNIPROTKB|F1PIZ6 [details] [associations]
symbol:DDX25 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014
PROSITE:PS51195 GeneTree:ENSGT00530000063236 OMA:WHFAERI
EMBL:AAEX03003382 Ensembl:ENSCAFT00000016722 Uniprot:F1PIZ6
Length = 462
Score = 257 (95.5 bits), Expect = 3.8e-31, Sum P(2) = 3.8e-31
Identities = 49/118 (41%), Positives = 81/118 (68%)
Query: 84 WLTEKMREANFTVSSMHGDMPQKERDGIMKEFRSGTSRVLITTDVWARGIDVQQVSLVIN 143
WLT +M + VS + G++ +R I++ FR G +VLITT+V RGIDV+QV++V+N
Sbjct: 332 WLTVEMMQDGHQVSLLSGELTVDQRASIIQRFRDGKEKVLITTNVSRRGIDVKQVTIVVN 391
Query: 144 YDLPNNR------ELYIHRIGRSGRFGRKGVAISFVKSDDIRILRDIEQYYSTQIDEM 195
+DLP N+ E Y+HRIGR+GRFG+KG+A + ++ D + +L I+ ++++ I ++
Sbjct: 392 FDLPVNQAEEPDYETYLHRIGRTGRFGKKGLAFNMIEVDKLPLLMKIQDHFNSSIKQL 449
Score = 111 (44.1 bits), Expect = 3.8e-31, Sum P(2) = 3.8e-31
Identities = 28/84 (33%), Positives = 47/84 (55%)
Query: 1 MNVQCHACIGGTNLSEDLRKLDYGQHVVSGTPGRVFDM-IRRRVLRTRNIKMLVLDEADE 59
++VQ I G ++ R D + ++ GTPG V D +R+++ I++ VLDEAD
Sbjct: 174 VDVQVMYAIRGNHIP---RGTDVTKQIIIGTPGTVLDWCFKRKLIDLTKIRVFVLDEADV 230
Query: 60 MLN-KGFKEQIYDVYRYLPPATQV 82
M++ +GF +Q + R LP Q+
Sbjct: 231 MIDTQGFSDQSIRIQRALPSECQM 254
>WB|WBGene00019245 [details] [associations]
symbol:sacy-1 species:6239 "Caenorhabditis elegans"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0009792 "embryo development ending in birth or
egg hatching" evidence=IMP] [GO:0040007 "growth" evidence=IMP]
[GO:0002119 "nematode larval development" evidence=IMP] [GO:0000003
"reproduction" evidence=IMP] [GO:0040010 "positive regulation of
growth rate" evidence=IMP] [GO:0002009 "morphogenesis of an
epithelium" evidence=IMP] [GO:0008340 "determination of adult
lifespan" evidence=IMP] [GO:0040035 "hermaphrodite genitalia
development" evidence=IMP] [GO:0005737 "cytoplasm" evidence=IDA]
[GO:0005634 "nucleus" evidence=IDA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR001878 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00343 SMART:SM00490 GO:GO:0005524 GO:GO:0005634
GO:GO:0008340 GO:GO:0009792 GO:GO:0002009 GO:GO:0005737
GO:GO:0040007 GO:GO:0040010 GO:GO:0002119 GO:GO:0008270
GO:GO:0003676 GO:GO:0040035 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 GeneTree:ENSGT00620000087942 HSSP:P10081 KO:K13116
OMA:KDQEERS HOGENOM:HOG000268792 EMBL:FO081567 RefSeq:NP_491962.1
ProteinModelPortal:Q9N5K1 SMR:Q9N5K1 PaxDb:Q9N5K1
EnsemblMetazoa:H27M09.1 GeneID:172413 KEGG:cel:CELE_H27M09.1
UCSC:H27M09.1 CTD:172413 WormBase:H27M09.1 InParanoid:Q9N5K1
NextBio:875413 Uniprot:Q9N5K1
Length = 630
Score = 224 (83.9 bits), Expect = 4.4e-31, Sum P(2) = 4.4e-31
Identities = 45/116 (38%), Positives = 72/116 (62%)
Query: 82 VDWLTEKMREANFTVSSMHGDMPQKERDGIMKEFRSGTSRVLITTDVWARGIDVQQVSLV 141
VD + E + V+S+HG Q +R ++ FR VL+ TDV ++G+D Q + V
Sbjct: 454 VDNIYEYLLVKGVEVASIHGGKDQSDRHAGIEAFRKNEKDVLVATDVASKGLDFQGIEHV 513
Query: 142 INYDLPNNRELYIHRIGRSGRFGRKGVAISFV-KSDDIRILRDIEQYYSTQIDEMP 196
IN+D+P + E Y+HRIGR+GR GRKG+A +F+ K ++ +L D++Q + E+P
Sbjct: 514 INFDMPEDIENYVHRIGRTGRSGRKGLATTFINKKSEMSVLSDLKQLLAEAGQELP 569
Score = 152 (58.6 bits), Expect = 4.4e-31, Sum P(2) = 4.4e-31
Identities = 31/92 (33%), Positives = 51/92 (55%)
Query: 8 CIGGTNLSEDLRKLDYGQHVVSGTPGRVFDMIRRRVLRTRNIKMLVLDEADEMLNKGFKE 67
CIGG + E + + G H+V TPGR+ DM+ ++++ + LVLDEAD ML+ GF++
Sbjct: 306 CIGGVPIGEQAKDVRDGIHIVVATPGRLSDMLTKKIINLEVCRYLVLDEADRMLDMGFED 365
Query: 68 QIYDVYRYLPPATQVDWLTEKM-REANFTVSS 98
+I ++ + Q + M R+ F S
Sbjct: 366 EIKSIFYFFKAQRQTLLFSATMPRKIQFFAKS 397
>UNIPROTKB|A5A6J2 [details] [associations]
symbol:DDX5 "Probable ATP-dependent RNA helicase DDX5"
species:9598 "Pan troglodytes" [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=ISS]
[GO:0000381 "regulation of alternative mRNA splicing, via
spliceosome" evidence=ISS] [GO:0003713 "transcription coactivator
activity" evidence=ISS] [GO:0003724 "RNA helicase activity"
evidence=ISS] [GO:0005730 "nucleolus" evidence=ISS] [GO:0030331
"estrogen receptor binding" evidence=ISS] [GO:0043517 "positive
regulation of DNA damage response, signal transduction by p53 class
mediator" evidence=ISS] [GO:0045667 "regulation of osteoblast
differentiation" evidence=ISS] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=ISS]
[GO:0050681 "androgen receptor binding" evidence=ISS] [GO:0060765
"regulation of androgen receptor signaling pathway" evidence=ISS]
[GO:0072332 "intrinsic apoptotic signaling pathway by p53 class
mediator" evidence=ISS] [GO:2001014 "regulation of skeletal muscle
cell differentiation" evidence=ISS] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 InterPro:IPR012587
Pfam:PF00270 Pfam:PF00271 Pfam:PF08061 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0005730
GO:GO:0008380 GO:GO:0006397 GO:GO:0045944 GO:GO:0006351
GO:GO:0005681 GO:GO:0003723 GO:GO:0000122 GO:GO:0003713
GO:GO:0050681 GO:GO:0043517 GO:GO:0030331 GO:GO:0060765
GO:GO:0045667 GO:GO:0072332 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 GO:GO:0000381 eggNOG:COG0513
GO:GO:0003724 InterPro:IPR014014 PROSITE:PS51195
HOGENOM:HOG000268804 KO:K12823 HOVERGEN:HBG015893 GO:GO:2001014
CTD:1655 OrthoDB:EOG4BVRTM EMBL:AB222120 RefSeq:NP_001138306.1
UniGene:Ptr.274 ProteinModelPortal:A5A6J2 PRIDE:A5A6J2
GeneID:455267 KEGG:ptr:455267 InParanoid:A5A6J2 NextBio:20836697
Uniprot:A5A6J2
Length = 614
Score = 245 (91.3 bits), Expect = 4.6e-31, Sum P(3) = 4.6e-31
Identities = 47/102 (46%), Positives = 67/102 (65%)
Query: 83 DWLTEKMREANFTVSSMHGDMPQKERDGIMKEFRSGTSRVLITTDVWARGIDVQQVSLVI 142
D LT KMR + +HGD Q+ERD ++ EF+ G + +LI TDV +RG+DV+ V VI
Sbjct: 355 DELTRKMRRDGWPAMGIHGDKSQQERDWVLNEFKHGKAPILIATDVASRGLDVEDVKFVI 414
Query: 143 NYDLPNNRELYIHRIGRSGRFGRKGVAISFVKSDDIRILRDI 184
NYD PN+ E YIHRIGR+ R + G A +F ++I+ + D+
Sbjct: 415 NYDYPNSSEDYIHRIGRTARSTKTGTAYTFFTPNNIKQVSDL 456
Score = 112 (44.5 bits), Expect = 4.6e-31, Sum P(3) = 4.6e-31
Identities = 28/75 (37%), Positives = 36/75 (48%)
Query: 8 CI-GGTNLSEDLRKLDYGQHVVSGTPGRVFDMIRRRVLRTRNIKMLVLDEADEMLNKGFK 66
CI GG +R L+ G TPGR+ D + R LVLDEAD ML+ GF+
Sbjct: 200 CIYGGAPKGPQIRDLERGVENCIATPGRLIDFLECGKTNLRRTTYLVLDEADRMLDMGFE 259
Query: 67 EQIYDVYRYLPPATQ 81
QI + + P Q
Sbjct: 260 PQIRKIVDQIRPDRQ 274
Score = 36 (17.7 bits), Expect = 4.6e-31, Sum P(3) = 4.6e-31
Identities = 7/26 (26%), Positives = 12/26 (46%)
Query: 183 DIEQYYSTQIDEMPMNGKRSLHSYPA 208
D Q Y + + M + ++YPA
Sbjct: 572 DSTQQYGSNVPNMHNGMNQQAYAYPA 597
>TIGR_CMR|VC_2564 [details] [associations]
symbol:VC_2564 "ATP-dependent RNA helicase DbpA"
species:686 "Vibrio cholerae O1 biovar El Tor" [GO:0006139
"nucleobase-containing compound metabolic process" evidence=ISS]
[GO:0008026 "ATP-dependent helicase activity" evidence=ISS]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 EMBL:AE003852 GenomeReviews:AE003852_GR
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195 HSSP:Q58083
KO:K05591 ProtClustDB:PRK11776 InterPro:IPR005580 Pfam:PF03880
OMA:THEKSTI PIR:B82060 RefSeq:NP_232192.1 ProteinModelPortal:Q9KP15
DNASU:2615581 GeneID:2615581 KEGG:vch:VC2564 PATRIC:20084152
Uniprot:Q9KP15
Length = 460
Score = 235 (87.8 bits), Expect = 5.8e-31, Sum P(2) = 5.8e-31
Identities = 43/113 (38%), Positives = 72/113 (63%)
Query: 81 QVDWLTEKMREANFTVSSMHGDMPQKERDGIMKEFRSGTSRVLITTDVWARGIDVQQVSL 140
+V + + + ++ F+V +HGDM Q+ERD + +F + + +L+ TDV ARG+DV +
Sbjct: 255 EVQNVADALHQSGFSVIELHGDMEQRERDQALVQFANKSISILVATDVAARGLDVDNLDA 314
Query: 141 VINYDLPNNRELYIHRIGRSGRFGRKGVAISFVKSDDIRILRDIEQYYSTQID 193
V NYDL + E+++HRIGR+GR G KG+A SF ++ + I++Y I+
Sbjct: 315 VFNYDLSRDPEVHVHRIGRTGRAGSKGLAFSFFSDNESYRVAQIDEYMDIAIE 367
Score = 133 (51.9 bits), Expect = 5.8e-31, Sum P(2) = 5.8e-31
Identities = 26/80 (32%), Positives = 42/80 (52%)
Query: 2 NVQCHACIGGTNLSEDLRKLDYGQHVVSGTPGRVFDMIRRRVLRTRNIKMLVLDEADEML 61
N++ GG + + L++G H++ GTPGR+ D + + + + LVLDEAD ML
Sbjct: 101 NIKVLTLCGGMPMGPQIGSLEHGAHILVGTPGRILDHLSKDRIDLSELNTLVLDEADRML 160
Query: 62 NKGFKEQIYDVYRYLPPATQ 81
GF+E + + P Q
Sbjct: 161 EMGFQEALEAIIAAAPAERQ 180
>UNIPROTKB|Q4R6M5 [details] [associations]
symbol:DDX5 "Probable ATP-dependent RNA helicase DDX5"
species:9541 "Macaca fascicularis" [GO:0000122 "negative regulation
of transcription from RNA polymerase II promoter" evidence=ISS]
[GO:0000381 "regulation of alternative mRNA splicing, via
spliceosome" evidence=ISS] [GO:0003713 "transcription coactivator
activity" evidence=ISS] [GO:0003724 "RNA helicase activity"
evidence=ISS] [GO:0005730 "nucleolus" evidence=ISS] [GO:0030331
"estrogen receptor binding" evidence=ISS] [GO:0043517 "positive
regulation of DNA damage response, signal transduction by p53 class
mediator" evidence=ISS] [GO:0045667 "regulation of osteoblast
differentiation" evidence=ISS] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=ISS]
[GO:0050681 "androgen receptor binding" evidence=ISS] [GO:0060765
"regulation of androgen receptor signaling pathway" evidence=ISS]
[GO:0072332 "intrinsic apoptotic signaling pathway by p53 class
mediator" evidence=ISS] [GO:2001014 "regulation of skeletal muscle
cell differentiation" evidence=ISS] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 InterPro:IPR012587
Pfam:PF00270 Pfam:PF00271 Pfam:PF08061 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0005730
GO:GO:0008380 GO:GO:0006397 GO:GO:0045944 GO:GO:0006351
GO:GO:0005681 GO:GO:0003723 GO:GO:0000122 GO:GO:0003713
GO:GO:0050681 GO:GO:0043517 GO:GO:0030331 GO:GO:0060765
GO:GO:0045667 GO:GO:0072332 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 GO:GO:0000381 GO:GO:0003724
InterPro:IPR014014 PROSITE:PS51195 HOVERGEN:HBG015893 GO:GO:2001014
HSSP:P10081 EMBL:AB169157 ProteinModelPortal:Q4R6M5 PRIDE:Q4R6M5
Uniprot:Q4R6M5
Length = 614
Score = 238 (88.8 bits), Expect = 6.5e-31, Sum P(3) = 6.5e-31
Identities = 46/102 (45%), Positives = 66/102 (64%)
Query: 83 DWLTEKMREANFTVSSMHGDMPQKERDGIMKEFRSGTSRVLITTDVWARGIDVQQVSLVI 142
D LT KMR + +HGD Q+ER ++ EF+ G + +LI TDV +RG+DV+ V VI
Sbjct: 355 DELTRKMRRDGWPAMGIHGDKSQQERGWVLNEFKHGKAPILIATDVASRGLDVEDVKFVI 414
Query: 143 NYDLPNNRELYIHRIGRSGRFGRKGVAISFVKSDDIRILRDI 184
NYD PN+ E YIHRIGR+ R + G A +F ++I+ + D+
Sbjct: 415 NYDYPNSSEDYIHRIGRTARSTKTGTAYTFFTPNNIKQVSDL 456
Score = 118 (46.6 bits), Expect = 6.5e-31, Sum P(3) = 6.5e-31
Identities = 28/75 (37%), Positives = 37/75 (49%)
Query: 8 CI-GGTNLSEDLRKLDYGQHVVSGTPGRVFDMIRRRVLRTRNIKMLVLDEADEMLNKGFK 66
CI GG +R L+ G + TPGR+ D + R LVLDEAD ML+ GF+
Sbjct: 200 CIYGGAPKGPQIRDLERGVEICIATPGRLIDFLECGKTNLRRTTYLVLDEADRMLDMGFE 259
Query: 67 EQIYDVYRYLPPATQ 81
QI + + P Q
Sbjct: 260 PQIRKIVDQIRPDRQ 274
Score = 36 (17.7 bits), Expect = 6.5e-31, Sum P(3) = 6.5e-31
Identities = 7/26 (26%), Positives = 12/26 (46%)
Query: 183 DIEQYYSTQIDEMPMNGKRSLHSYPA 208
D Q Y + + M + ++YPA
Sbjct: 572 DSTQQYGSNVPNMHNGMNQQAYAYPA 597
>TAIR|locus:2076351 [details] [associations]
symbol:AT3G58510 species:3702 "Arabidopsis thaliana"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA;ISS] [GO:0005730 "nucleolus" evidence=IDA] [GO:0005886
"plasma membrane" evidence=IDA] [GO:0005777 "peroxisome"
evidence=IDA] [GO:0005829 "cytosol" evidence=RCA]
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005886
GO:GO:0005524 EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0005730
GO:GO:0005777 GO:GO:0003723 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 EMBL:AL137082 eggNOG:COG0513
InterPro:IPR014014 PROSITE:PS51195 HOGENOM:HOG000268804 KO:K11594
EMBL:AY088091 EMBL:AY062446 EMBL:AY114637 EMBL:AJ010463
IPI:IPI00521485 PIR:T45671 PIR:T51742 RefSeq:NP_001030884.1
RefSeq:NP_567067.1 RefSeq:NP_974455.1 UniGene:At.22801
UniGene:At.70259 ProteinModelPortal:Q8LA13 SMR:Q8LA13 IntAct:Q8LA13
STRING:Q8LA13 PaxDb:Q8LA13 PRIDE:Q8LA13 EnsemblPlants:AT3G58510.1
EnsemblPlants:AT3G58510.2 EnsemblPlants:AT3G58510.3 GeneID:825020
KEGG:ath:AT3G58510 GeneFarm:927 TAIR:At3g58510 InParanoid:Q8LA13
OMA:FCAPDEA PhylomeDB:Q8LA13 ProtClustDB:CLSN2683925
Genevestigator:Q8LA13 GermOnline:AT3G58510 Uniprot:Q8LA13
Length = 612
Score = 239 (89.2 bits), Expect = 7.2e-31, Sum P(2) = 7.2e-31
Identities = 45/117 (38%), Positives = 76/117 (64%)
Query: 80 TQVDWLTEKMREANFTVSSMHGDMPQKERDGIMKEFRSGTSRVLITTDVWARGIDVQQVS 139
T +WL M E F +S+HGD Q+ER+ ++ F++G + +L+ TDV ARG+D+ V+
Sbjct: 423 TLENWLC--MNE--FPATSIHGDRTQQEREVALRSFKTGRTPILVATDVAARGLDIPHVA 478
Query: 140 LVINYDLPNNRELYIHRIGRSGRFGRKGVAISFVKSDDIRILRDIEQYYSTQIDEMP 196
V+N+DLPN+ + Y+HRIGR+GR G+ G+A +F ++ ++ R + + E+P
Sbjct: 479 HVVNFDLPNDIDDYVHRIGRTGRAGKSGIATAFFNENNAQLARSLAELMQEANQEVP 535
Score = 134 (52.2 bits), Expect = 7.2e-31, Sum P(2) = 7.2e-31
Identities = 28/71 (39%), Positives = 44/71 (61%)
Query: 10 GGTNLSEDLRKLDYGQHVVSGTPGRVFDMIRRRVLRTRNIKMLVLDEADEMLNKGFKEQI 69
GGT + + LR+L+ G ++ TPGR+ D++ R + + I+ L LDEAD ML+ GF+ QI
Sbjct: 265 GGTPIHQQLRELERGCDILVATPGRLNDLLERARVSMQMIRFLALDEADRMLDMGFEPQI 324
Query: 70 YDVYRYL--PP 78
+ + PP
Sbjct: 325 RKIVEQMDMPP 335
>UNIPROTKB|Q83DM8 [details] [associations]
symbol:rhlE "ATP-dependent RNA helicase" species:227377
"Coxiella burnetii RSA 493" [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0003676
EMBL:AE016828 GenomeReviews:AE016828_GR InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014
PROSITE:PS51195 HOGENOM:HOG000268807 KO:K11927 OMA:HLIKQHN
RefSeq:NP_819700.2 ProteinModelPortal:Q83DM8 GeneID:1208557
KEGG:cbu:CBU_0670 PATRIC:17930019 ProtClustDB:CLSK914228
BioCyc:CBUR227377:GJ7S-666-MONOMER Uniprot:Q83DM8
Length = 420
Score = 234 (87.4 bits), Expect = 1.0e-30, Sum P(2) = 1.0e-30
Identities = 43/115 (37%), Positives = 76/115 (66%)
Query: 85 LTEKMREANFTVSSMHGDMPQKERDGIMKEFRSGTSRVLITTDVWARGIDVQQVSLVINY 144
L++++ + +++HG+ Q R + +F+ G RVL+ TDV ARG+D+ ++ VIN+
Sbjct: 272 LSQQLESDGLSSAAIHGNKSQAARMRALTQFKQGKIRVLVATDVAARGLDIDKLPHVINF 331
Query: 145 DLPNNRELYIHRIGRSGRFGRKGVAISFVKSDDIRILRDIEQYYSTQIDEMPMNG 199
+LP+ + Y+HR+GR+GR GVAIS V D++R+LRDIE+ +++ + + G
Sbjct: 332 ELPDAAKDYVHRVGRTGRASNDGVAISLVSGDEVRLLRDIEKLLQSKMPQEVIPG 386
Score = 129 (50.5 bits), Expect = 1.0e-30, Sum P(2) = 1.0e-30
Identities = 25/72 (34%), Positives = 40/72 (55%)
Query: 10 GGTNLSEDLRKLDYGQHVVSGTPGRVFDMIRRRVLRTRNIKMLVLDEADEMLNKGFKEQI 69
GG ++ + L G ++ TPGR+ D++ + VL ++ VLDEAD ML+ GF I
Sbjct: 122 GGVSIKPQINHLRRGVDILVATPGRLLDLVNQGVLNLSRVEFFVLDEADRMLDMGFLPDI 181
Query: 70 YDVYRYLPPATQ 81
+ + LP + Q
Sbjct: 182 RRILKLLPESRQ 193
>TIGR_CMR|CBU_0670 [details] [associations]
symbol:CBU_0670 "ATP-dependent RNA helicase RhlE,
putative" species:227377 "Coxiella burnetii RSA 493" [GO:0008150
"biological_process" evidence=ND] [GO:0008026 "ATP-dependent
helicase activity" evidence=ISS] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 EMBL:AE016828 GenomeReviews:AE016828_GR
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 HOGENOM:HOG000268807 KO:K11927
OMA:HLIKQHN RefSeq:NP_819700.2 ProteinModelPortal:Q83DM8
GeneID:1208557 KEGG:cbu:CBU_0670 PATRIC:17930019
ProtClustDB:CLSK914228 BioCyc:CBUR227377:GJ7S-666-MONOMER
Uniprot:Q83DM8
Length = 420
Score = 234 (87.4 bits), Expect = 1.0e-30, Sum P(2) = 1.0e-30
Identities = 43/115 (37%), Positives = 76/115 (66%)
Query: 85 LTEKMREANFTVSSMHGDMPQKERDGIMKEFRSGTSRVLITTDVWARGIDVQQVSLVINY 144
L++++ + +++HG+ Q R + +F+ G RVL+ TDV ARG+D+ ++ VIN+
Sbjct: 272 LSQQLESDGLSSAAIHGNKSQAARMRALTQFKQGKIRVLVATDVAARGLDIDKLPHVINF 331
Query: 145 DLPNNRELYIHRIGRSGRFGRKGVAISFVKSDDIRILRDIEQYYSTQIDEMPMNG 199
+LP+ + Y+HR+GR+GR GVAIS V D++R+LRDIE+ +++ + + G
Sbjct: 332 ELPDAAKDYVHRVGRTGRASNDGVAISLVSGDEVRLLRDIEKLLQSKMPQEVIPG 386
Score = 129 (50.5 bits), Expect = 1.0e-30, Sum P(2) = 1.0e-30
Identities = 25/72 (34%), Positives = 40/72 (55%)
Query: 10 GGTNLSEDLRKLDYGQHVVSGTPGRVFDMIRRRVLRTRNIKMLVLDEADEMLNKGFKEQI 69
GG ++ + L G ++ TPGR+ D++ + VL ++ VLDEAD ML+ GF I
Sbjct: 122 GGVSIKPQINHLRRGVDILVATPGRLLDLVNQGVLNLSRVEFFVLDEADRMLDMGFLPDI 181
Query: 70 YDVYRYLPPATQ 81
+ + LP + Q
Sbjct: 182 RRILKLLPESRQ 193
>CGD|CAL0000067 [details] [associations]
symbol:DBP5 species:5476 "Candida albicans" [GO:0003724 "RNA
helicase activity" evidence=IEA] [GO:0000822 "inositol
hexakisphosphate binding" evidence=IEA] [GO:0008186 "RNA-dependent
ATPase activity" evidence=IEA] [GO:0005829 "cytosol" evidence=IEA]
[GO:0005934 "cellular bud tip" evidence=IEA] [GO:0044614 "nuclear
pore cytoplasmic filaments" evidence=IEA] [GO:0005844 "polysome"
evidence=IEA] [GO:0006406 "mRNA export from nucleus" evidence=IEA]
[GO:0006415 "translational termination" evidence=IEA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 CGD:CAL0000067 GO:GO:0005524 GO:GO:0005737
GO:GO:0015031 GO:GO:0031965 GO:GO:0005643 GO:GO:0003723
EMBL:AACQ01000014 EMBL:AACQ01000013 GO:GO:0051028
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
RefSeq:XP_721619.1 RefSeq:XP_721738.1 ProteinModelPortal:Q5AJD0
PRIDE:Q5AJD0 GeneID:3636564 GeneID:3636693 KEGG:cal:CaO19.1661
KEGG:cal:CaO19.9230 Uniprot:Q5AJD0
Length = 540
Score = 255 (94.8 bits), Expect = 1.4e-30, Sum P(2) = 1.4e-30
Identities = 54/122 (44%), Positives = 80/122 (65%)
Query: 83 DWLTEKMREANFTVSSMHGDMPQKERDGIMKEFRSGTSRVLITTDVWARGIDVQQVSLVI 142
D L KM++ TVS +HG + +RD ++ +FR G S+VLITT+V ARGID+ VS+V+
Sbjct: 402 DVLYGKMKKEGHTVSVLHGGLDNTDRDRLIDDFREGRSKVLITTNVLARGIDIASVSMVV 461
Query: 143 NYDLPNNR------ELYIHRIGRSGRFGRKGVAISFVKSD-DIRILRDIEQYY-STQIDE 194
NYD+P ++ Y+HRIGR+GRFGR GV+ISF+ IL I+ Y+ + ++
Sbjct: 462 NYDMPTDKYGKPDPSTYLHRIGRTGRFGRVGVSISFIHDRRSYDILMAIKAYFGNVEMTR 521
Query: 195 MP 196
+P
Sbjct: 522 VP 523
Score = 112 (44.5 bits), Expect = 1.4e-30, Sum P(2) = 1.4e-30
Identities = 26/57 (45%), Positives = 34/57 (59%)
Query: 27 VVSGTPGRVFDMIRRRVLRTRNIKMLVLDEADEMLN-KGFKEQIYDVYRYLPPATQV 82
V+ GTPG D+IRRR L +K+ VLDEAD ML +G +Q V + LP Q+
Sbjct: 269 VLVGTPGIAIDLIRRRQLNLSKMKVFVLDEADNMLEAQGLGDQAIRVKKALPRGVQL 325
>UNIPROTKB|E1C2R8 [details] [associations]
symbol:DDX17 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0009791 "post-embryonic
development" evidence=IEA] [GO:0072358 "cardiovascular system
development" evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 GeneTree:ENSGT00660000095174
OMA:QQFPQPP EMBL:AADN02006148 EMBL:AADN02006147 IPI:IPI00594176
Ensembl:ENSGALT00000020002 Uniprot:E1C2R8
Length = 496
Score = 245 (91.3 bits), Expect = 1.6e-30, Sum P(2) = 1.6e-30
Identities = 47/102 (46%), Positives = 66/102 (64%)
Query: 83 DWLTEKMREANFTVSSMHGDMPQKERDGIMKEFRSGTSRVLITTDVWARGIDVQQVSLVI 142
D LT +MR + +HGD Q ERD ++ EFRSG + +LI TDV +RG+DV+ V VI
Sbjct: 351 DDLTRRMRRDGWPAMCIHGDKSQPERDWVLNEFRSGKAPILIATDVASRGLDVEDVKFVI 410
Query: 143 NYDLPNNRELYIHRIGRSGRFGRKGVAISFVKSDDIRILRDI 184
NYD PN+ E Y+HRIGR+ R KG A +F +++ R++
Sbjct: 411 NYDYPNSSEDYVHRIGRTARSTNKGTAYTFFTPGNLKQAREL 452
Score = 120 (47.3 bits), Expect = 1.6e-30, Sum P(2) = 1.6e-30
Identities = 28/75 (37%), Positives = 37/75 (49%)
Query: 8 CI-GGTNLSEDLRKLDYGQHVVSGTPGRVFDMIRRRVLRTRNIKMLVLDEADEMLNKGFK 66
CI GG +R L+ G + TPGR+ D + R LVLDEAD ML+ GF+
Sbjct: 196 CIYGGAPKGPQIRDLERGVEICIATPGRLIDFLEAGKTNLRRCTYLVLDEADRMLDMGFE 255
Query: 67 EQIYDVYRYLPPATQ 81
QI + + P Q
Sbjct: 256 PQIRKIVDQIRPDRQ 270
>TIGR_CMR|CPS_2658 [details] [associations]
symbol:CPS_2658 "ATP-dependent RNA helicase, DEAD box
family" species:167879 "Colwellia psychrerythraea 34H" [GO:0004004
"ATP-dependent RNA helicase activity" evidence=ISS] [GO:0016070
"RNA metabolic process" evidence=ISS] InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0003676 EMBL:CP000083
GenomeReviews:CP000083_GR InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 HOGENOM:HOG000268807 RefSeq:YP_269372.1
ProteinModelPortal:Q480Z7 GeneID:3520428 KEGG:cps:CPS_2658
PATRIC:21468367 OMA:ERNFDSS BioCyc:CPSY167879:GI48-2720-MONOMER
Uniprot:Q480Z7
Length = 399
Score = 244 (91.0 bits), Expect = 2.0e-30, Sum P(2) = 2.0e-30
Identities = 48/103 (46%), Positives = 69/103 (66%)
Query: 83 DWLTEKMREANFTVSSMHGDMPQKERDGIMKEFRSGTSRVLITTDVWARGIDVQQVSLVI 142
D + + + +A+ T +S+H Q R+ ++ F+ T RVL+ TDV ARGIDV ++LVI
Sbjct: 259 DIIVKALEKASITAASLHSGKTQAVREEALQNFKDSTLRVLVATDVAARGIDVDNITLVI 318
Query: 143 NYDLPNNRELYIHRIGRSGRFGRKGVAISFVKSDDIRILRDIE 185
NY+LP + YIHRIGR+ R G+ G+AISF +DIR L +IE
Sbjct: 319 NYNLPEDPRNYIHRIGRTARAGKSGMAISFAVENDIRQLTNIE 361
Score = 113 (44.8 bits), Expect = 2.0e-30, Sum P(2) = 2.0e-30
Identities = 22/72 (30%), Positives = 39/72 (54%)
Query: 10 GGTNLSEDLRKLDYGQHVVSGTPGRVFDMIRRRVLRTRNIKMLVLDEADEMLNKGFKEQI 69
GG + ++ G ++ TPGR+ D+I + + +++ VLDEAD ML+ GF + +
Sbjct: 111 GGVGRQAQVDSIELGLDILVATPGRLLDLIETGDINFKALEVFVLDEADTMLDMGFFKDV 170
Query: 70 YDVYRYLPPATQ 81
+ LP + Q
Sbjct: 171 QSIISKLPKSRQ 182
>WB|WBGene00018776 [details] [associations]
symbol:F53H1.1 species:6239 "Caenorhabditis elegans"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0040010 "positive regulation of growth rate"
evidence=IMP] [GO:0000003 "reproduction" evidence=IMP] [GO:0002009
"morphogenesis of an epithelium" evidence=IMP] [GO:0040035
"hermaphrodite genitalia development" evidence=IMP] [GO:0009792
"embryo development ending in birth or egg hatching" evidence=IMP]
[GO:0006898 "receptor-mediated endocytosis" evidence=IMP]
[GO:0040018 "positive regulation of multicellular organism growth"
evidence=IMP] [GO:0040011 "locomotion" evidence=IMP] [GO:0040007
"growth" evidence=IMP] [GO:0002119 "nematode larval development"
evidence=IMP] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0009792
GO:GO:0002009 GO:GO:0006898 GO:GO:0040007 GO:GO:0040010
GO:GO:0002119 GO:GO:0040011 GO:GO:0040018 GO:GO:0003676
GO:GO:0040035 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
HSSP:P10081 GeneTree:ENSGT00610000086076 KO:K12811
HOGENOM:HOG000007229 OMA:IEEENKF EMBL:FO081458
RefSeq:NP_001033411.1 ProteinModelPortal:Q965K2 SMR:Q965K2
PaxDb:Q965K2 PRIDE:Q965K2 EnsemblMetazoa:F53H1.1 GeneID:176943
KEGG:cel:CELE_F53H1.1 UCSC:F53H1.1 CTD:176943 WormBase:F53H1.1
InParanoid:Q965K2 NextBio:894678 ArrayExpress:Q965K2 Uniprot:Q965K2
Length = 970
Score = 227 (85.0 bits), Expect = 2.2e-30, Sum P(3) = 2.2e-30
Identities = 42/91 (46%), Positives = 64/91 (70%)
Query: 83 DWLTEKMREANFTVSSMHGDMPQKERDGIMKEFRSGTSRVLITTDVWARGIDVQQVSLVI 142
D + + MR +V+ +HG + Q +RD + +F++G +VL+ T V ARG+DV+ + LV+
Sbjct: 566 DIVDQLMRTGYNSVAPLHGGIDQHDRDSSIADFKTGVIKVLVATSVAARGLDVKNLILVV 625
Query: 143 NYDLPNNRELYIHRIGRSGRFGRKGVAISFV 173
NYD PN+ E Y+HR+GR+GR GRKG A +FV
Sbjct: 626 NYDCPNHYEDYVHRVGRTGRAGRKGYAYTFV 656
Score = 135 (52.6 bits), Expect = 2.2e-30, Sum P(3) = 2.2e-30
Identities = 32/79 (40%), Positives = 43/79 (54%)
Query: 7 ACI-GGTNLSEDLRKLDYGQHVVSGTPGRVFDMIRR---RVLRTRNIKMLVLDEADEMLN 62
AC GG +SE + L G +V TPGR+ D++ +V R + LVLDEAD M +
Sbjct: 409 ACTYGGVGISEQIADLKRGAEIVVCTPGRMIDVLAANSGKVTNLRRVTYLVLDEADRMFD 468
Query: 63 KGFKEQIYDVYRYLPPATQ 81
KGF+ QI V + P Q
Sbjct: 469 KGFEPQIMKVVNNIRPDKQ 487
Score = 35 (17.4 bits), Expect = 2.2e-30, Sum P(3) = 2.2e-30
Identities = 6/9 (66%), Positives = 7/9 (77%)
Query: 196 PMNGKRSLH 204
P NG+R LH
Sbjct: 918 PKNGERRLH 926
>UNIPROTKB|Q8EIE5 [details] [associations]
symbol:dbpA "ATP-dependent RNA helicase DbpA"
species:211586 "Shewanella oneidensis MR-1" [GO:0008150
"biological_process" evidence=ND] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 EMBL:AE014299 GenomeReviews:AE014299_GR
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 HOGENOM:HOG000268809 KO:K05591
OMA:HIDPARF ProtClustDB:PRK11776 InterPro:IPR005580 Pfam:PF03880
HSSP:P10081 RefSeq:NP_716527.1 ProteinModelPortal:Q8EIE5
GeneID:1168744 KEGG:son:SO_0897 PATRIC:23521451 Uniprot:Q8EIE5
Length = 458
Score = 211 (79.3 bits), Expect = 2.2e-30, Sum P(2) = 2.2e-30
Identities = 42/123 (34%), Positives = 72/123 (58%)
Query: 85 LTEKMREANFTVSSMHGDMPQKERDGIMKEFRSGTSRVLITTDVWARGIDVQQVSLVINY 144
+ +++ F+V ++HGD+ Q++RD + +F + ++ VL+ TDV ARG+D+ + V NY
Sbjct: 256 VADELEGLGFSVLALHGDLEQRDRDETLLQFANKSACVLVATDVAARGLDIDALDAVFNY 315
Query: 145 DLPNNRELYIHRIGRSGRFGRKGVAISFVKSDDIRILRDIEQYYSTQIDEMPMNGKRSLH 204
+ + E++IHRIGR+GR G KG A +F D + +E+Y +I + L
Sbjct: 316 HVAYDTEVHIHRIGRTGRAGSKGAAYTFYNDQDGYKIALLEEYLDREITSESLPSLSLLG 375
Query: 205 SYP 207
S P
Sbjct: 376 SAP 378
Score = 153 (58.9 bits), Expect = 2.2e-30, Sum P(2) = 2.2e-30
Identities = 31/80 (38%), Positives = 44/80 (55%)
Query: 2 NVQCHACIGGTNLSEDLRKLDYGQHVVSGTPGRVFDMIRRRVLRTRNIKMLVLDEADEML 61
NV+ GG + + L++G H++ GTPGR+ D + R L N+ MLVLDEAD ML
Sbjct: 98 NVKVLTLCGGVPMGPQIGSLEHGAHIIVGTPGRIVDHLDRNRLDLSNLNMLVLDEADRML 157
Query: 62 NKGFKEQIYDVYRYLPPATQ 81
GF+ Q+ + P Q
Sbjct: 158 EMGFQPQLDAIIEQSPRERQ 177
>TIGR_CMR|SO_0897 [details] [associations]
symbol:SO_0897 "ATP-dependent RNA helicase DbpA"
species:211586 "Shewanella oneidensis MR-1" [GO:0008150
"biological_process" evidence=ND] [GO:0008026 "ATP-dependent
helicase activity" evidence=ISS] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 EMBL:AE014299 GenomeReviews:AE014299_GR
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 HOGENOM:HOG000268809 KO:K05591
OMA:HIDPARF ProtClustDB:PRK11776 InterPro:IPR005580 Pfam:PF03880
HSSP:P10081 RefSeq:NP_716527.1 ProteinModelPortal:Q8EIE5
GeneID:1168744 KEGG:son:SO_0897 PATRIC:23521451 Uniprot:Q8EIE5
Length = 458
Score = 211 (79.3 bits), Expect = 2.2e-30, Sum P(2) = 2.2e-30
Identities = 42/123 (34%), Positives = 72/123 (58%)
Query: 85 LTEKMREANFTVSSMHGDMPQKERDGIMKEFRSGTSRVLITTDVWARGIDVQQVSLVINY 144
+ +++ F+V ++HGD+ Q++RD + +F + ++ VL+ TDV ARG+D+ + V NY
Sbjct: 256 VADELEGLGFSVLALHGDLEQRDRDETLLQFANKSACVLVATDVAARGLDIDALDAVFNY 315
Query: 145 DLPNNRELYIHRIGRSGRFGRKGVAISFVKSDDIRILRDIEQYYSTQIDEMPMNGKRSLH 204
+ + E++IHRIGR+GR G KG A +F D + +E+Y +I + L
Sbjct: 316 HVAYDTEVHIHRIGRTGRAGSKGAAYTFYNDQDGYKIALLEEYLDREITSESLPSLSLLG 375
Query: 205 SYP 207
S P
Sbjct: 376 SAP 378
Score = 153 (58.9 bits), Expect = 2.2e-30, Sum P(2) = 2.2e-30
Identities = 31/80 (38%), Positives = 44/80 (55%)
Query: 2 NVQCHACIGGTNLSEDLRKLDYGQHVVSGTPGRVFDMIRRRVLRTRNIKMLVLDEADEML 61
NV+ GG + + L++G H++ GTPGR+ D + R L N+ MLVLDEAD ML
Sbjct: 98 NVKVLTLCGGVPMGPQIGSLEHGAHIIVGTPGRIVDHLDRNRLDLSNLNMLVLDEADRML 157
Query: 62 NKGFKEQIYDVYRYLPPATQ 81
GF+ Q+ + P Q
Sbjct: 158 EMGFQPQLDAIIEQSPRERQ 177
>ZFIN|ZDB-GENE-030131-18 [details] [associations]
symbol:si:dkey-156n14.5 "si:dkey-156n14.5"
species:7955 "Danio rerio" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 ZFIN:ZDB-GENE-030131-18 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 GeneTree:ENSGT00660000095174
KO:K13178 EMBL:CR626864 IPI:IPI00896916 RefSeq:XP_001923830.1
UniGene:Dr.75535 Ensembl:ENSDART00000129202 GeneID:556764
KEGG:dre:556764 NextBio:20881652 ArrayExpress:F1QBS1 Bgee:F1QBS1
Uniprot:F1QBS1
Length = 671
Score = 252 (93.8 bits), Expect = 2.4e-30, Sum P(2) = 2.4e-30
Identities = 49/102 (48%), Positives = 66/102 (64%)
Query: 83 DWLTEKMREANFTVSSMHGDMPQKERDGIMKEFRSGTSRVLITTDVWARGIDVQQVSLVI 142
D LT +MR + +HGD Q ERD ++ EFRSG + +LI TDV +RG+DV+ V VI
Sbjct: 356 DELTRRMRRDGWPAMCIHGDKSQPERDWVLTEFRSGKAPILIATDVASRGLDVEDVKFVI 415
Query: 143 NYDLPNNRELYIHRIGRSGRFGRKGVAISFVKSDDIRILRDI 184
NYD PN+ E Y+HRIGR+ R KG A +F ++R RD+
Sbjct: 416 NYDYPNSSEDYVHRIGRTARSTNKGTAYTFFTPGNLRQARDL 457
Score = 117 (46.2 bits), Expect = 2.4e-30, Sum P(2) = 2.4e-30
Identities = 27/75 (36%), Positives = 37/75 (49%)
Query: 8 CI-GGTNLSEDLRKLDYGQHVVSGTPGRVFDMIRRRVLRTRNIKMLVLDEADEMLNKGFK 66
C+ GG +R L+ G + TPGR+ D + R LVLDEAD ML+ GF+
Sbjct: 201 CVYGGAPKGPQIRDLERGVEICIATPGRLIDFLEVGKTNLRRCTYLVLDEADRMLDMGFE 260
Query: 67 EQIYDVYRYLPPATQ 81
QI + + P Q
Sbjct: 261 PQIRKIVDQIRPDRQ 275
>UNIPROTKB|E2RRQ7 [details] [associations]
symbol:DDX3X "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
GeneTree:ENSGT00620000087942 OMA:KYERGGN EMBL:AAEX03026295
Ensembl:ENSCAFT00000022643 Uniprot:E2RRQ7
Length = 706
Score = 233 (87.1 bits), Expect = 2.7e-30, Sum P(2) = 2.7e-30
Identities = 46/114 (40%), Positives = 70/114 (61%)
Query: 83 DWLTEKMREANFTVSSMHGDMPQKERDGIMKEFRSGTSRVLITTDVWARGIDVQQVSLVI 142
D L + + + +S+HGD Q++R+ + +FRSG S +L+ T V ARG+D+ V VI
Sbjct: 499 DSLEDFLYHEGYACTSIHGDRSQRDREEALHQFRSGKSPILVATAVAARGLDISNVKHVI 558
Query: 143 NYDLPNNRELYIHRIGRSGRFGRKGVAISFVKSDDIRILRDIEQYYSTQIDEMP 196
N+DLP++ E Y+HRIGR+GR G G+A SF +I I +D+ E+P
Sbjct: 559 NFDLPSDIEEYVHRIGRTGRVGNLGLATSFFNERNINITKDLLDLLVEAKQEVP 612
Score = 137 (53.3 bits), Expect = 2.7e-30, Sum P(2) = 2.7e-30
Identities = 30/75 (40%), Positives = 45/75 (60%)
Query: 8 CI--GGTNLSEDLRKLDYGQHVVSGTPGRVFDMIRRRVLRTRNIKMLVLDEADEMLNKGF 65
C+ GG ++ + +R L+ G H++ TPGR+ DM+ R + K LVLDEAD ML+ GF
Sbjct: 340 CVVYGGADIGQQIRDLERGCHLLVATPGRLVDMMERGKIGLDFCKYLVLDEADRMLDMGF 399
Query: 66 KEQIYDVYRY--LPP 78
+ QI + +PP
Sbjct: 400 EPQIRRIVEQDTMPP 414
>SGD|S000006040 [details] [associations]
symbol:DBP1 "Putative ATP-dependent RNA helicase of the
DEAD-box protein family" species:4932 "Saccharomyces cerevisiae"
[GO:0005737 "cytoplasm" evidence=IEA;IDA] [GO:0006413
"translational initiation" evidence=IEA;IMP] [GO:0003724 "RNA
helicase activity" evidence=ISS] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA] [GO:0003743
"translation initiation factor activity" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0006412 "translation" evidence=IEA] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 SGD:S000006040 GO:GO:0005524
GO:GO:0005737 GO:GO:0006413 EMBL:BK006949 GO:GO:0003743 EMBL:U43503
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
eggNOG:COG0513 GO:GO:0003724 InterPro:IPR014014 PROSITE:PS51195
EMBL:X55993 PIR:S62003 RefSeq:NP_015206.1 ProteinModelPortal:P24784
SMR:P24784 DIP:DIP-2576N IntAct:P24784 MINT:MINT-426870
STRING:P24784 PaxDb:P24784 EnsemblFungi:YPL119C GeneID:855984
KEGG:sce:YPL119C CYGD:YPL119c GeneTree:ENSGT00620000087942
HOGENOM:HOG000268804 KO:K11594 OMA:DELLMEN OrthoDB:EOG4XPTQ4
NextBio:980825 Genevestigator:P24784 GermOnline:YPL119C
Uniprot:P24784
Length = 617
Score = 231 (86.4 bits), Expect = 3.4e-30, Sum P(2) = 3.4e-30
Identities = 45/114 (39%), Positives = 73/114 (64%)
Query: 83 DWLTEKMREANFTVSSMHGDMPQKERDGIMKEFRSGTSRVLITTDVWARGIDVQQVSLVI 142
D LT+ + NF +++HGD Q ER+ + F++ + +L+ T V ARG+D+ V+ VI
Sbjct: 425 DQLTDFLIMQNFKATAIHGDRTQAERERALSAFKANVADILVATAVAARGLDIPNVTHVI 484
Query: 143 NYDLPNNRELYIHRIGRSGRFGRKGVAISFVKSDDIRILRDIEQYYSTQIDEMP 196
NYDLP++ + Y+HRIGR+GR G GVA SF S++ I++ + + + E+P
Sbjct: 485 NYDLPSDIDDYVHRIGRTGRAGNTGVATSFFNSNNQNIVKGLMEILNEANQEVP 538
Score = 136 (52.9 bits), Expect = 3.4e-30, Sum P(2) = 3.4e-30
Identities = 34/95 (35%), Positives = 50/95 (52%)
Query: 8 CI--GGTNLSEDLRKLDYGQHVVSGTPGRVFDMIRRRVLRTRNIKMLVLDEADEMLNKGF 65
C+ GG + +R++D G ++ TPGR+ D++ R + NIK LVLDEAD ML+ GF
Sbjct: 269 CVVYGGAPIGNQMREVDRGCDLLVATPGRLNDLLERGKVSLANIKYLVLDEADRMLDMGF 328
Query: 66 KEQIYDVYRYLPPATQVDWLTEKMREANFTVSSMH 100
+ QI + + V+ M A F V H
Sbjct: 329 EPQIRHIVEECDMPS-VENRQTLMFSATFPVDIQH 362
>UNIPROTKB|Q8EBV7 [details] [associations]
symbol:SO_3388 "ATP-dependent RNA helicase DEAD box family"
species:211586 "Shewanella oneidensis MR-1" [GO:0008150
"biological_process" evidence=ND] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 EMBL:AE014299 GenomeReviews:AE014299_GR
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 HSSP:P10081 HOGENOM:HOG000268807
RefSeq:NP_718942.1 ProteinModelPortal:Q8EBV7 GeneID:1171066
KEGG:son:SO_3388 PATRIC:23526456 OMA:SHLVRSK ProtClustDB:CLSK907144
Uniprot:Q8EBV7
Length = 409
Score = 235 (87.8 bits), Expect = 3.4e-30, Sum P(2) = 3.4e-30
Identities = 44/104 (42%), Positives = 68/104 (65%)
Query: 82 VDWLTEKMREANFTVSSMHGDMPQKERDGIMKEFRSGTSRVLITTDVWARGIDVQQVSLV 141
VD LT ++ + S HGD+ Q R+ +++EF+ G +VL+ TDV ARG+D+ ++ V
Sbjct: 258 VDKLTAQLNKLGVATQSFHGDLSQGAREKVLQEFKQGLVQVLVATDVAARGLDIAELQYV 317
Query: 142 INYDLPNNRELYIHRIGRSGRFGRKGVAISFVKSDDIRILRDIE 185
IN++LP E YIHRIGR+GR G G+AI+ +D +L ++E
Sbjct: 318 INFELPFIAEDYIHRIGRTGRAGSAGLAITLFSQEDALLLEEVE 361
Score = 122 (48.0 bits), Expect = 3.4e-30, Sum P(2) = 3.4e-30
Identities = 27/88 (30%), Positives = 45/88 (51%)
Query: 10 GGTNLSEDLRKLDYGQHVVSGTPGRVFDMIRRRVLRTRNIKMLVLDEADEMLNKGFKEQI 69
GG ++ + G V+ TPGR+ D +R+ L + LV DEAD ML+ GF ++I
Sbjct: 111 GGVSIEAQQAVFNAGIDVLIATPGRLLDHLRQGALNLNQLNTLVFDEADRMLDMGFMDEI 170
Query: 70 YDVYRYLPPATQVDWLTEKMREANFTVS 97
V + +P Q + + ++ F+ S
Sbjct: 171 QAVLKQVPAQRQTLLFSATLDDSIFSFS 198
>TIGR_CMR|SO_3388 [details] [associations]
symbol:SO_3388 "ATP-dependent RNA helicase, DEAD box
family" species:211586 "Shewanella oneidensis MR-1" [GO:0008150
"biological_process" evidence=ND] [GO:0008026 "ATP-dependent
helicase activity" evidence=ISS] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 EMBL:AE014299 GenomeReviews:AE014299_GR
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 HSSP:P10081 HOGENOM:HOG000268807
RefSeq:NP_718942.1 ProteinModelPortal:Q8EBV7 GeneID:1171066
KEGG:son:SO_3388 PATRIC:23526456 OMA:SHLVRSK ProtClustDB:CLSK907144
Uniprot:Q8EBV7
Length = 409
Score = 235 (87.8 bits), Expect = 3.4e-30, Sum P(2) = 3.4e-30
Identities = 44/104 (42%), Positives = 68/104 (65%)
Query: 82 VDWLTEKMREANFTVSSMHGDMPQKERDGIMKEFRSGTSRVLITTDVWARGIDVQQVSLV 141
VD LT ++ + S HGD+ Q R+ +++EF+ G +VL+ TDV ARG+D+ ++ V
Sbjct: 258 VDKLTAQLNKLGVATQSFHGDLSQGAREKVLQEFKQGLVQVLVATDVAARGLDIAELQYV 317
Query: 142 INYDLPNNRELYIHRIGRSGRFGRKGVAISFVKSDDIRILRDIE 185
IN++LP E YIHRIGR+GR G G+AI+ +D +L ++E
Sbjct: 318 INFELPFIAEDYIHRIGRTGRAGSAGLAITLFSQEDALLLEEVE 361
Score = 122 (48.0 bits), Expect = 3.4e-30, Sum P(2) = 3.4e-30
Identities = 27/88 (30%), Positives = 45/88 (51%)
Query: 10 GGTNLSEDLRKLDYGQHVVSGTPGRVFDMIRRRVLRTRNIKMLVLDEADEMLNKGFKEQI 69
GG ++ + G V+ TPGR+ D +R+ L + LV DEAD ML+ GF ++I
Sbjct: 111 GGVSIEAQQAVFNAGIDVLIATPGRLLDHLRQGALNLNQLNTLVFDEADRMLDMGFMDEI 170
Query: 70 YDVYRYLPPATQVDWLTEKMREANFTVS 97
V + +P Q + + ++ F+ S
Sbjct: 171 QAVLKQVPAQRQTLLFSATLDDSIFSFS 198
>UNIPROTKB|D3IVZ2 [details] [associations]
symbol:DDX3Y "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0005737
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
GeneTree:ENSGT00620000087942 HOGENOM:HOG000268804 EMBL:DAAA02075532
EMBL:GQ259590 IPI:IPI00955537 UniGene:Bt.89461
Ensembl:ENSBTAT00000065838 OMA:MSHEAVK Uniprot:D3IVZ2
Length = 661
Score = 231 (86.4 bits), Expect = 3.5e-30, Sum P(2) = 3.5e-30
Identities = 46/114 (40%), Positives = 69/114 (60%)
Query: 83 DWLTEKMREANFTVSSMHGDMPQKERDGIMKEFRSGTSRVLITTDVWARGIDVQQVSLVI 142
D L + + + +S+HGD Q++R+ + +FRSG S +L+ T V ARG+D+ V VI
Sbjct: 455 DSLEDFLYHEGYACTSIHGDRSQRDREEALHQFRSGKSPILVATAVAARGLDISNVKHVI 514
Query: 143 NYDLPNNRELYIHRIGRSGRFGRKGVAISFVKSDDIRILRDIEQYYSTQIDEMP 196
N+DLP + E Y+HRIGR+GR G G+A SF +I I +D+ E+P
Sbjct: 515 NFDLPGDIEEYVHRIGRTGRVGNLGLATSFFNERNINISKDLLDLLVEAKQEVP 568
Score = 137 (53.3 bits), Expect = 3.5e-30, Sum P(2) = 3.5e-30
Identities = 30/75 (40%), Positives = 45/75 (60%)
Query: 8 CI--GGTNLSEDLRKLDYGQHVVSGTPGRVFDMIRRRVLRTRNIKMLVLDEADEMLNKGF 65
C+ GG ++ + +R L+ G H++ TPGR+ DM+ R + K LVLDEAD ML+ GF
Sbjct: 298 CVVYGGADIGQQIRDLERGCHLLVATPGRLVDMMERGKIGLDFCKYLVLDEADRMLDMGF 357
Query: 66 KEQIYDVYRY--LPP 78
+ QI + +PP
Sbjct: 358 EPQIRRIIEQDTMPP 372
>DICTYBASE|DDB_G0270396 [details] [associations]
symbol:ddx49 "DEAD/DEAH box helicase" species:44689
"Dictyostelium discoideum" [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0008150 "biological_process"
evidence=ND] [GO:0005575 "cellular_component" evidence=ND]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490
dictyBase:DDB_G0270396 GO:GO:0005524 EMBL:AAFI02000005
GenomeReviews:CM000150_GR GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513
InterPro:IPR014014 PROSITE:PS51195 KO:K14778 OMA:FRNLCAI
RefSeq:XP_646762.1 HSSP:P60842 ProteinModelPortal:Q55BR9
PRIDE:Q55BR9 EnsemblProtists:DDB0234206 GeneID:8617735
KEGG:ddi:DDB_G0270396 ProtClustDB:CLSZ2846935 Uniprot:Q55BR9
Length = 508
Score = 234 (87.4 bits), Expect = 3.5e-30, Sum P(2) = 3.5e-30
Identities = 43/96 (44%), Positives = 65/96 (67%)
Query: 98 SMHGDMPQKERDGIMKEFRSGTSRVLITTDVWARGIDVQQVSLVINYDLPNNRELYIHRI 157
S+H + QK R +K F+SG +VL+ TDV +RG+D+ V +VINY L N+ + YIHR+
Sbjct: 274 SLHSFLDQKSRLAALKTFKSGKVKVLVATDVASRGLDIPDVQIVINYKLSNSSKDYIHRV 333
Query: 158 GRSGRFGRKGVAISFVKSDDIRILRDIEQYYSTQID 193
GR+ RFGR G AISF+ D+ +++ IE+ Q++
Sbjct: 334 GRTARFGRSGRAISFITPHDVSLIKGIEEIIKKQLE 369
Score = 129 (50.5 bits), Expect = 3.5e-30, Sum P(2) = 3.5e-30
Identities = 30/80 (37%), Positives = 46/80 (57%)
Query: 1 MNVQCHACIGGT-NLSEDLRKLDYGQHVVSGTPGRVFDMIRRRV-LRTRNIKMLVLDEAD 58
MNV C IGG N+++ L LD H++ TPGR+ + + + + K LVLDEAD
Sbjct: 99 MNVNCSVVIGGIDNVTQALI-LDKRPHIIVATPGRLASHLNNGLKIALKFCKFLVLDEAD 157
Query: 59 EMLNKGFKEQIYDVYRYLPP 78
+L + F+ +I + +LPP
Sbjct: 158 RLLGEDFELEIASILEHLPP 177
>WB|WBGene00019219 [details] [associations]
symbol:H20J04.4 species:6239 "Caenorhabditis elegans"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0040010 "positive regulation of growth rate"
evidence=IMP] [GO:0002009 "morphogenesis of an epithelium"
evidence=IMP] [GO:0000003 "reproduction" evidence=IMP] [GO:0040035
"hermaphrodite genitalia development" evidence=IMP]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0002009 GO:GO:0040010
GO:GO:0003676 GO:GO:0040035 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 KO:K14778 HOGENOM:HOG000268802
GeneTree:ENSGT00670000098028 OMA:CQLLSMT EMBL:FO080156
RefSeq:NP_001040789.1 ProteinModelPortal:Q2WF63 SMR:Q2WF63
PaxDb:Q2WF63 EnsemblMetazoa:H20J04.4b GeneID:186756
KEGG:cel:CELE_H20J04.4 UCSC:H20J04.4a CTD:186756 WormBase:H20J04.4b
InParanoid:Q2WF63 NextBio:932876 ArrayExpress:Q2WF63 Uniprot:Q2WF63
Length = 561
Score = 248 (92.4 bits), Expect = 3.8e-30, Sum P(2) = 3.8e-30
Identities = 47/107 (43%), Positives = 72/107 (67%)
Query: 94 FTVSSMHGDMPQKERDGIMKEFRSGTSRVLITTDVWARGIDVQQVSLVINYDLPNNRELY 153
F V S+H +PQK+R + FRS T +V+I TDV +RG+D+ V LV+N+++P + Y
Sbjct: 362 FRVGSLHSQIPQKQRLAALSAFRSKTLQVIICTDVASRGLDIPHVDLVVNHNVPQCPKTY 421
Query: 154 IHRIGRSGRFGRKGVAISFVKSDDIRILRDIEQYYSTQIDEMPMNGK 200
IHR+GRS R GR G A+SFV D+ +L+ +EQ ++DE+ ++ K
Sbjct: 422 IHRVGRSARAGRFGSALSFVTQYDVELLQAVEQVIGKKLDELKVSPK 468
Score = 116 (45.9 bits), Expect = 3.8e-30, Sum P(2) = 3.8e-30
Identities = 26/85 (30%), Positives = 44/85 (51%)
Query: 1 MNVQCHACIGGTNLSEDLRKLDYGQHVVSGTPGRVFDMIRR---RVLRT-RNIKMLVLDE 56
+ ++C +GG +L R+L HVV TPGR+ D+I + + + I+ VLDE
Sbjct: 184 ITLKCSVIVGGRSLIHQARELSERPHVVVATPGRLADLIESDPDTIAKVFKKIQFFVLDE 243
Query: 57 ADEMLNKGFKEQIYDVYRYLPPATQ 81
AD ML + +Q+ ++ + Q
Sbjct: 244 ADRMLEGQYNDQLKPIFESISEKRQ 268
>UNIPROTKB|F1NM08 [details] [associations]
symbol:DDX5 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0003712 "transcription cofactor activity" evidence=IEA]
[GO:0003724 "RNA helicase activity" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
InterPro:IPR012587 Pfam:PF00270 Pfam:PF00271 Pfam:PF08061
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0005634 GO:GO:0003676 GO:GO:0003712 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 GO:GO:0003724
InterPro:IPR014014 PROSITE:PS51195 GeneTree:ENSGT00660000095174
EMBL:AADN02030017 IPI:IPI00680367 Ensembl:ENSGALT00000005586
ArrayExpress:F1NM08 Uniprot:F1NM08
Length = 595
Score = 245 (91.3 bits), Expect = 4.1e-30, Sum P(2) = 4.1e-30
Identities = 47/102 (46%), Positives = 67/102 (65%)
Query: 83 DWLTEKMREANFTVSSMHGDMPQKERDGIMKEFRSGTSRVLITTDVWARGIDVQQVSLVI 142
D LT KMR + +HGD Q+ERD ++ EF+ G + +LI TDV +RG+DV+ V VI
Sbjct: 343 DDLTRKMRRDGWPAMGIHGDKSQQERDWVLNEFKHGKAPILIATDVASRGLDVEDVKFVI 402
Query: 143 NYDLPNNRELYIHRIGRSGRFGRKGVAISFVKSDDIRILRDI 184
NYD PN+ E YIHRIGR+ R + G A +F ++I+ + D+
Sbjct: 403 NYDYPNSSEDYIHRIGRTARSTKTGTAYTFFTPNNIKQVNDL 444
Score = 120 (47.3 bits), Expect = 4.1e-30, Sum P(2) = 4.1e-30
Identities = 28/75 (37%), Positives = 37/75 (49%)
Query: 8 CI-GGTNLSEDLRKLDYGQHVVSGTPGRVFDMIRRRVLRTRNIKMLVLDEADEMLNKGFK 66
CI GG +R L+ G + TPGR+ D + R LVLDEAD ML+ GF+
Sbjct: 188 CIYGGAPKGPQIRDLERGVEICIATPGRLIDFLEAGKTNLRRCTYLVLDEADRMLDMGFE 247
Query: 67 EQIYDVYRYLPPATQ 81
QI + + P Q
Sbjct: 248 PQIRKIVDQIRPDRQ 262
>UNIPROTKB|O05855 [details] [associations]
symbol:rhlE "PROBABLE ATP-DEPENDENT RNA HELICASE RHLE"
species:83332 "Mycobacterium tuberculosis H37Rv" [GO:0005618 "cell
wall" evidence=IDA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0005618
GenomeReviews:AE000516_GR GenomeReviews:AL123456_GR GO:GO:0003676
EMBL:BX842582 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195 HSSP:P10081
HOGENOM:HOG000268807 EMBL:CP003248 PIR:D70595 RefSeq:NP_217727.1
RefSeq:NP_337835.1 RefSeq:YP_006516683.1 SMR:O05855
EnsemblBacteria:EBMYCT00000003215 EnsemblBacteria:EBMYCT00000071518
GeneID:13318029 GeneID:888840 GeneID:923099 KEGG:mtc:MT3307
KEGG:mtu:Rv3211 KEGG:mtv:RVBD_3211 PATRIC:18129030
TubercuList:Rv3211 OMA:RWQLIDK ProtClustDB:CLSK792349
Uniprot:O05855
Length = 527
Score = 235 (87.8 bits), Expect = 4.2e-30, Sum P(2) = 4.2e-30
Identities = 43/94 (45%), Positives = 65/94 (69%)
Query: 85 LTEKMREANFTVSSMHGDMPQKERDGIMKEFRSGTSRVLITTDVWARGIDVQQVSLVINY 144
+ +++ E F V ++HGD+ Q R+ +K FR+G VL+ TDV ARGID+ V+ VINY
Sbjct: 286 VADELTERGFAVGAVHGDLGQLAREKALKAFRTGGIDVLVATDVAARGIDIDDVTHVINY 345
Query: 145 DLPNNRELYIHRIGRSGRFGRKGVAISFVKSDDI 178
P + ++Y+HRIGR+GR GR GVA++ V D++
Sbjct: 346 QCPEDEKMYVHRIGRTGRAGRTGVAVTLVDWDEL 379
Score = 128 (50.1 bits), Expect = 4.2e-30, Sum P(2) = 4.2e-30
Identities = 29/72 (40%), Positives = 40/72 (55%)
Query: 10 GGTNLSEDLRKLDYGQHVVSGTPGRVFDMIRRRVLRTRNIKMLVLDEADEMLNKGFKEQI 69
GG + L G VV GTPGR+ D+ ++ L+ + +LVLDEADEML+ GF I
Sbjct: 134 GGRPYEPQIEALRAGADVVVGTPGRLLDLCQQGHLQLGGLSVLVLDEADEMLDLGFLPDI 193
Query: 70 YDVYRYLPPATQ 81
+ R +P Q
Sbjct: 194 ERILRQIPADRQ 205
>UNIPROTKB|F1NXI3 [details] [associations]
symbol:DDX5 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003724 "RNA helicase activity" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0000122 "negative
regulation of transcription from RNA polymerase II promoter"
evidence=IEA] [GO:0000381 "regulation of alternative mRNA splicing,
via spliceosome" evidence=IEA] [GO:0001701 "in utero embryonic
development" evidence=IEA] [GO:0003713 "transcription coactivator
activity" evidence=IEA] [GO:0005730 "nucleolus" evidence=IEA]
[GO:0007623 "circadian rhythm" evidence=IEA] [GO:0030331 "estrogen
receptor binding" evidence=IEA] [GO:0033148 "positive regulation of
intracellular estrogen receptor signaling pathway" evidence=IEA]
[GO:0036002 "pre-mRNA binding" evidence=IEA] [GO:0043517 "positive
regulation of DNA damage response, signal transduction by p53 class
mediator" evidence=IEA] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=IEA]
[GO:0050681 "androgen receptor binding" evidence=IEA] [GO:0060765
"regulation of androgen receptor signaling pathway" evidence=IEA]
[GO:0071013 "catalytic step 2 spliceosome" evidence=IEA]
[GO:0072332 "intrinsic apoptotic signaling pathway by p53 class
mediator" evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 InterPro:IPR012587 Pfam:PF00270 Pfam:PF00271
Pfam:PF08061 PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490
GO:GO:0005524 GO:GO:0005730 GO:GO:0045944 GO:GO:0000122
GO:GO:0003713 GO:GO:0033148 GO:GO:0043517 GO:GO:0060765
GO:GO:0072332 GO:GO:0071013 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 GO:GO:0000381 GO:GO:0003724
InterPro:IPR014014 PROSITE:PS51195 GO:GO:0036002 OMA:IDAMSGY
GeneTree:ENSGT00660000095174 EMBL:AADN02030017 IPI:IPI00598253
ProteinModelPortal:F1NXI3 Ensembl:ENSGALT00000034644
ArrayExpress:F1NXI3 Uniprot:F1NXI3
Length = 603
Score = 245 (91.3 bits), Expect = 4.3e-30, Sum P(2) = 4.3e-30
Identities = 47/102 (46%), Positives = 67/102 (65%)
Query: 83 DWLTEKMREANFTVSSMHGDMPQKERDGIMKEFRSGTSRVLITTDVWARGIDVQQVSLVI 142
D LT KMR + +HGD Q+ERD ++ EF+ G + +LI TDV +RG+DV+ V VI
Sbjct: 351 DDLTRKMRRDGWPAMGIHGDKSQQERDWVLNEFKHGKAPILIATDVASRGLDVEDVKFVI 410
Query: 143 NYDLPNNRELYIHRIGRSGRFGRKGVAISFVKSDDIRILRDI 184
NYD PN+ E YIHRIGR+ R + G A +F ++I+ + D+
Sbjct: 411 NYDYPNSSEDYIHRIGRTARSTKTGTAYTFFTPNNIKQVNDL 452
Score = 120 (47.3 bits), Expect = 4.3e-30, Sum P(2) = 4.3e-30
Identities = 28/75 (37%), Positives = 37/75 (49%)
Query: 8 CI-GGTNLSEDLRKLDYGQHVVSGTPGRVFDMIRRRVLRTRNIKMLVLDEADEMLNKGFK 66
CI GG +R L+ G + TPGR+ D + R LVLDEAD ML+ GF+
Sbjct: 196 CIYGGAPKGPQIRDLERGVEICIATPGRLIDFLEAGKTNLRRCTYLVLDEADRMLDMGFE 255
Query: 67 EQIYDVYRYLPPATQ 81
QI + + P Q
Sbjct: 256 PQIRKIVDQIRPDRQ 270
>UNIPROTKB|B4DXX7 [details] [associations]
symbol:DDX3Y "Uncharacterized protein" species:9606 "Homo
sapiens" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IDA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0005737
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195 HOVERGEN:HBG015893
UniGene:Hs.99120 HGNC:HGNC:2699 EMBL:AC004474 EMBL:AK302172
IPI:IPI00646152 SMR:B4DXX7 STRING:B4DXX7 Ensembl:ENST00000537441
UCSC:uc011nar.1 Uniprot:B4DXX7
Length = 657
Score = 230 (86.0 bits), Expect = 4.4e-30, Sum P(2) = 4.4e-30
Identities = 45/114 (39%), Positives = 70/114 (61%)
Query: 83 DWLTEKMREANFTVSSMHGDMPQKERDGIMKEFRSGTSRVLITTDVWARGIDVQQVSLVI 142
D L + + + +S+HGD Q++R+ + +FRSG S +L+ T V ARG+D+ V VI
Sbjct: 450 DSLEDFLYHEGYACTSIHGDRSQRDREEALHQFRSGKSPILVATAVAARGLDISNVRHVI 509
Query: 143 NYDLPNNRELYIHRIGRSGRFGRKGVAISFVKSDDIRILRDIEQYYSTQIDEMP 196
N+DLP++ E Y+HRIGR+GR G G+A SF ++ I +D+ E+P
Sbjct: 510 NFDLPSDIEEYVHRIGRTGRVGNLGLATSFFNEKNMNITKDLLDLLVEAKQEVP 563
Score = 137 (53.3 bits), Expect = 4.4e-30, Sum P(2) = 4.4e-30
Identities = 30/75 (40%), Positives = 45/75 (60%)
Query: 8 CI--GGTNLSEDLRKLDYGQHVVSGTPGRVFDMIRRRVLRTRNIKMLVLDEADEMLNKGF 65
C+ GG ++ + +R L+ G H++ TPGR+ DM+ R + K LVLDEAD ML+ GF
Sbjct: 293 CVVYGGADIGQQIRDLERGCHLLVATPGRLVDMMERGKIGLDFCKYLVLDEADRMLDMGF 352
Query: 66 KEQIYDVYRY--LPP 78
+ QI + +PP
Sbjct: 353 EPQIRRIVEQDTMPP 367
>UNIPROTKB|O15523 [details] [associations]
symbol:DDX3Y "ATP-dependent RNA helicase DDX3Y"
species:9606 "Homo sapiens" [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
[GO:0003723 "RNA binding" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IDA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0005634
GO:GO:0005737 GO:GO:0003677 GO:GO:0003723 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513
InterPro:IPR014014 PROSITE:PS51195 Orphanet:1646
HOGENOM:HOG000268804 KO:K11594 HOVERGEN:HBG015893 HPA:HPA001648
HPA:HPA005631 OrthoDB:EOG47D9FV EMBL:AF000985 EMBL:AF000984
EMBL:BC034942 IPI:IPI00293616 RefSeq:NP_001116137.1
RefSeq:NP_004651.2 UniGene:Hs.99120 ProteinModelPortal:O15523
SMR:O15523 IntAct:O15523 MINT:MINT-2999090 STRING:O15523
PhosphoSite:O15523 PaxDb:O15523 PRIDE:O15523
Ensembl:ENST00000336079 Ensembl:ENST00000360160 GeneID:8653
KEGG:hsa:8653 UCSC:uc004fsu.1 CTD:8653 GeneCards:GC0YP015016
HGNC:HGNC:2699 MIM:400010 neXtProt:NX_O15523 PharmGKB:PA27168
InParanoid:O15523 OMA:GNWANAN PhylomeDB:O15523 GenomeRNAi:8653
NextBio:32449 ArrayExpress:O15523 Bgee:O15523 CleanEx:HS_DDX3Y
Genevestigator:O15523 GermOnline:ENSG00000067048 Uniprot:O15523
Length = 660
Score = 230 (86.0 bits), Expect = 4.4e-30, Sum P(2) = 4.4e-30
Identities = 45/114 (39%), Positives = 70/114 (61%)
Query: 83 DWLTEKMREANFTVSSMHGDMPQKERDGIMKEFRSGTSRVLITTDVWARGIDVQQVSLVI 142
D L + + + +S+HGD Q++R+ + +FRSG S +L+ T V ARG+D+ V VI
Sbjct: 453 DSLEDFLYHEGYACTSIHGDRSQRDREEALHQFRSGKSPILVATAVAARGLDISNVRHVI 512
Query: 143 NYDLPNNRELYIHRIGRSGRFGRKGVAISFVKSDDIRILRDIEQYYSTQIDEMP 196
N+DLP++ E Y+HRIGR+GR G G+A SF ++ I +D+ E+P
Sbjct: 513 NFDLPSDIEEYVHRIGRTGRVGNLGLATSFFNEKNMNITKDLLDLLVEAKQEVP 566
Score = 137 (53.3 bits), Expect = 4.4e-30, Sum P(2) = 4.4e-30
Identities = 30/75 (40%), Positives = 45/75 (60%)
Query: 8 CI--GGTNLSEDLRKLDYGQHVVSGTPGRVFDMIRRRVLRTRNIKMLVLDEADEMLNKGF 65
C+ GG ++ + +R L+ G H++ TPGR+ DM+ R + K LVLDEAD ML+ GF
Sbjct: 296 CVVYGGADIGQQIRDLERGCHLLVATPGRLVDMMERGKIGLDFCKYLVLDEADRMLDMGF 355
Query: 66 KEQIYDVYRY--LPP 78
+ QI + +PP
Sbjct: 356 EPQIRRIVEQDTMPP 370
>UNIPROTKB|Q0C354 [details] [associations]
symbol:rhlE "ATP-dependent RNA helicase RhlE"
species:228405 "Hyphomonas neptunium ATCC 15444" [GO:0006139
"nucleobase-containing compound metabolic process" evidence=ISS]
[GO:0008026 "ATP-dependent helicase activity" evidence=ISS]
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 EMBL:CP000158
GenomeReviews:CP000158_GR GO:GO:0008026 eggNOG:COG0513
InterPro:IPR014014 PROSITE:PS51195 HOGENOM:HOG000268807 KO:K11927
RefSeq:YP_759839.1 ProteinModelPortal:Q0C354 STRING:Q0C354
GeneID:4290097 KEGG:hne:HNE_1118 PATRIC:32215041 OMA:KHGSEKL
BioCyc:HNEP228405:GI69-1155-MONOMER Uniprot:Q0C354
Length = 464
Score = 217 (81.4 bits), Expect = 4.5e-30, Sum P(2) = 4.5e-30
Identities = 50/127 (39%), Positives = 77/127 (60%)
Query: 83 DWLTEKMREANFTVSSMHGDMPQKERDGIMKEFRSGTSRVLITTDVWARGIDVQQVSLVI 142
D + +++ +A+ ++HG+ Q +R+ ++ F++G +L+ TD+ ARGI V ++ VI
Sbjct: 264 DGVVKRLAKADIDSVAIHGNKSQSQREKALEAFKAGRVPILVATDIAARGIHVDALTHVI 323
Query: 143 NYDLPNNRELYIHRIGRSGRFGRKGVAISFVKSDDIRILRDIEQYYSTQIDEMPMNGKRS 202
NYDLP+ E ++HRIGR+ R G GVAISF D+ LR IE+ T + P NG S
Sbjct: 324 NYDLPDVPEQFVHRIGRTARAGNSGVAISFCSRDERPTLRAIEKL--TGLKLAP-NGV-S 379
Query: 203 LHSYPAR 209
L P R
Sbjct: 380 LPDEPLR 386
Score = 144 (55.7 bits), Expect = 4.5e-30, Sum P(2) = 4.5e-30
Identities = 27/92 (29%), Positives = 53/92 (57%)
Query: 1 MNVQCHACIGGTNLSEDLRKLDYGQHVVSGTPGRVFDMIRRRVLRTRNIKMLVLDEADEM 60
+N++ GG + +R+L+ G H++ TPGR+ D++ +R + ++ L+LDEAD+M
Sbjct: 107 LNLRVVMVCGGAKIGGQIRQLERGAHILVATPGRLIDLMEQRAVSLDKVETLILDEADQM 166
Query: 61 LNKGFKEQIYDVYRYLPPATQVDWLTEKMREA 92
L+ GF + + + +P Q + + M +A
Sbjct: 167 LDLGFIHALRAIAKNVPSKRQTLFFSATMPKA 198
>UNIPROTKB|Q9NXZ2 [details] [associations]
symbol:DDX43 "Probable ATP-dependent RNA helicase DDX43"
species:9606 "Homo sapiens" [GO:0003723 "RNA binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0004004 "ATP-dependent
RNA helicase activity" evidence=TAS] [GO:0005622 "intracellular"
evidence=IDA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR004087 InterPro:IPR004088 InterPro:IPR011545
Pfam:PF00013 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS50084 PROSITE:PS51194 SMART:SM00322 SMART:SM00490
GO:GO:0005524 GO:GO:0003723 GO:GO:0005622 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0004004 eggNOG:COG0513
InterPro:IPR014014 PROSITE:PS51195 HOGENOM:HOG000268804
HOVERGEN:HBG015893 EMBL:AJ278110 EMBL:AL136751 EMBL:BC066938
IPI:IPI00032899 RefSeq:NP_061135.2 UniGene:Hs.125507
ProteinModelPortal:Q9NXZ2 SMR:Q9NXZ2 STRING:Q9NXZ2
PhosphoSite:Q9NXZ2 DMDM:145559466 PRIDE:Q9NXZ2 DNASU:55510
Ensembl:ENST00000370336 GeneID:55510 KEGG:hsa:55510 UCSC:uc003pgw.3
CTD:55510 GeneCards:GC06P074161 HGNC:HGNC:18677 HPA:HPA031380
HPA:HPA031381 MIM:606286 neXtProt:NX_Q9NXZ2 PharmGKB:PA134988734
InParanoid:Q9NXZ2 OMA:VLDITHV OrthoDB:EOG43BMNQ PhylomeDB:Q9NXZ2
ChiTaRS:DDX43 GenomeRNAi:55510 NextBio:59918 ArrayExpress:Q9NXZ2
Bgee:Q9NXZ2 CleanEx:HS_DDX43 Genevestigator:Q9NXZ2
GermOnline:ENSG00000080007 Uniprot:Q9NXZ2
Length = 648
Score = 233 (87.1 bits), Expect = 5.1e-30, Sum P(2) = 5.1e-30
Identities = 43/102 (42%), Positives = 69/102 (67%)
Query: 83 DWLTEKMREANFTVSSMHGDMPQKERDGIMKEFRSGTSRVLITTDVWARGIDVQQVSLVI 142
D L+ + N +V S+HGD Q++R+ ++ F++G R+LI TD+ +RG+DV V+ V
Sbjct: 501 DHLSSDLILGNISVESLHGDREQRDREKALENFKTGKVRILIATDLASRGLDVHDVTHVY 560
Query: 143 NYDLPNNRELYIHRIGRSGRFGRKGVAISFVKSDDIRILRDI 184
N+D P N E Y+HRIGR+GR GR GV+I+ + +D R+ ++
Sbjct: 561 NFDFPRNIEEYVHRIGRTGRAGRTGVSITTLTRNDWRVASEL 602
Score = 133 (51.9 bits), Expect = 5.1e-30, Sum P(2) = 5.1e-30
Identities = 29/75 (38%), Positives = 43/75 (57%)
Query: 8 CI-GGTNLSEDLRKLDYGQHVVSGTPGRVFDMIRRRVLRTRNIKMLVLDEADEMLNKGFK 66
C+ GG N E + +L G ++ TPGR+ D+ + +NI LVLDEAD+ML+ GF+
Sbjct: 348 CVYGGGNRDEQIEELKKGVDIIIATPGRLNDLQMSNFVNLKNITYLVLDEADKMLDMGFE 407
Query: 67 EQIYDVYRYLPPATQ 81
QI + + P Q
Sbjct: 408 PQIMKILLDVRPDRQ 422
>CGD|CAL0003204 [details] [associations]
symbol:DBP2 species:5476 "Candida albicans" [GO:0005730
"nucleolus" evidence=IEA] [GO:0005829 "cytosol" evidence=IEA]
[GO:0005739 "mitochondrion" evidence=IEA] [GO:0000184
"nuclear-transcribed mRNA catabolic process, nonsense-mediated
decay" evidence=IEA] [GO:0006364 "rRNA processing" evidence=IEA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 CGD:CAL0003204 GO:GO:0005524 GO:GO:0005634
GO:GO:0005737 GO:GO:0000184 GO:GO:0003723 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0006364 GO:GO:0008026
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195 EMBL:AACQ01000245
EMBL:AACQ01000246 RefSeq:XP_710694.1 RefSeq:XP_710708.1
ProteinModelPortal:Q59LU0 PRIDE:Q59LU0 GeneID:3647692
GeneID:3647705 KEGG:cal:CaO19.171 KEGG:cal:CaO19.7804 KO:K12823
Uniprot:Q59LU0
Length = 562
Score = 241 (89.9 bits), Expect = 5.3e-30, Sum P(2) = 5.3e-30
Identities = 46/102 (45%), Positives = 67/102 (65%)
Query: 83 DWLTEKMREANFTVSSMHGDMPQKERDGIMKEFRSGTSRVLITTDVWARGIDVQQVSLVI 142
D +T +R + ++HGD Q ERD ++ EFR G + +++ TDV ARGIDV+ ++ VI
Sbjct: 388 DEITTYLRSDGWPALAIHGDKEQNERDWVLDEFRKGKTSIMVATDVAARGIDVKGITHVI 447
Query: 143 NYDLPNNRELYIHRIGRSGRFGRKGVAISFVKSDDIRILRDI 184
NYD+P N E Y+HRIGR+GR G G AISF + ++ D+
Sbjct: 448 NYDMPGNIEDYVHRIGRTGRGGASGTAISFFTEGNSKLGGDL 489
Score = 122 (48.0 bits), Expect = 5.3e-30, Sum P(2) = 5.3e-30
Identities = 27/77 (35%), Positives = 39/77 (50%)
Query: 6 HACI-GGTNLSEDLRKLDYGQHVVSGTPGRVFDMIRRRVLRTRNIKMLVLDEADEMLNKG 64
+ C+ GG +R L G + TPGR+ DM+ + + LVLDEAD ML+ G
Sbjct: 231 NTCVYGGAPKGPQIRDLARGVEICIATPGRLIDMLEAGKTNLKRVTYLVLDEADRMLDMG 290
Query: 65 FKEQIYDVYRYLPPATQ 81
F+ QI + + P Q
Sbjct: 291 FEPQIRKIVDQIRPDRQ 307
Score = 35 (17.4 bits), Expect = 6.2e-05, Sum P(2) = 6.2e-05
Identities = 8/12 (66%), Positives = 8/12 (66%)
Query: 156 RIGRSGRFGRKG 167
R GR GR GR G
Sbjct: 528 RGGRGGRGGRGG 539
Score = 35 (17.4 bits), Expect = 6.2e-05, Sum P(2) = 6.2e-05
Identities = 8/12 (66%), Positives = 8/12 (66%)
Query: 156 RIGRSGRFGRKG 167
R GR GR GR G
Sbjct: 525 RGGRGGRGGRGG 536
Score = 35 (17.4 bits), Expect = 6.2e-05, Sum P(2) = 6.2e-05
Identities = 8/12 (66%), Positives = 8/12 (66%)
Query: 156 RIGRSGRFGRKG 167
R GR GR GR G
Sbjct: 522 RGGRGGRGGRGG 533
>UNIPROTKB|A7E307 [details] [associations]
symbol:DDX17 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0072358 "cardiovascular system development"
evidence=IEA] [GO:0009791 "post-embryonic development"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 GO:GO:0009791 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 HOGENOM:HOG000268804 GeneTree:ENSGT00660000095174
CTD:10521 HOVERGEN:HBG015893 KO:K13178 OrthoDB:EOG4QRH3N
GO:GO:0072358 EMBL:DAAA02014661 EMBL:DAAA02014662 EMBL:BC151648
IPI:IPI00914517 RefSeq:NP_001095463.1 UniGene:Bt.91623
Ensembl:ENSBTAT00000037682 GeneID:514323 KEGG:bta:514323
InParanoid:A7E307 OMA:QQFPQPP NextBio:20871275 Uniprot:A7E307
Length = 650
Score = 245 (91.3 bits), Expect = 6.0e-30, Sum P(2) = 6.0e-30
Identities = 47/102 (46%), Positives = 66/102 (64%)
Query: 83 DWLTEKMREANFTVSSMHGDMPQKERDGIMKEFRSGTSRVLITTDVWARGIDVQQVSLVI 142
D LT +MR + +HGD Q ERD ++ EFRSG + +LI TDV +RG+DV+ V VI
Sbjct: 353 DDLTRRMRRDGWPAMCIHGDKSQPERDWVLNEFRSGKAPILIATDVASRGLDVEDVKFVI 412
Query: 143 NYDLPNNRELYIHRIGRSGRFGRKGVAISFVKSDDIRILRDI 184
NYD PN+ E Y+HRIGR+ R KG A +F +++ R++
Sbjct: 413 NYDYPNSSEDYVHRIGRTARSTNKGTAYTFFTPGNLKQAREL 454
Score = 120 (47.3 bits), Expect = 6.0e-30, Sum P(2) = 6.0e-30
Identities = 28/75 (37%), Positives = 37/75 (49%)
Query: 8 CI-GGTNLSEDLRKLDYGQHVVSGTPGRVFDMIRRRVLRTRNIKMLVLDEADEMLNKGFK 66
CI GG +R L+ G + TPGR+ D + R LVLDEAD ML+ GF+
Sbjct: 198 CIYGGAPKGPQIRDLERGVEICIATPGRLIDFLESGKTNLRRCTYLVLDEADRMLDMGFE 257
Query: 67 EQIYDVYRYLPPATQ 81
QI + + P Q
Sbjct: 258 PQIRKIVDQIRPDRQ 272
>UNIPROTKB|E2RJ60 [details] [associations]
symbol:DDX17 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
GeneTree:ENSGT00660000095174 EMBL:AAEX03007314
Ensembl:ENSCAFT00000037931 Uniprot:E2RJ60
Length = 650
Score = 245 (91.3 bits), Expect = 6.0e-30, Sum P(2) = 6.0e-30
Identities = 47/102 (46%), Positives = 66/102 (64%)
Query: 83 DWLTEKMREANFTVSSMHGDMPQKERDGIMKEFRSGTSRVLITTDVWARGIDVQQVSLVI 142
D LT +MR + +HGD Q ERD ++ EFRSG + +LI TDV +RG+DV+ V VI
Sbjct: 353 DDLTRRMRRDGWPAMCIHGDKSQPERDWVLNEFRSGKAPILIATDVASRGLDVEDVKFVI 412
Query: 143 NYDLPNNRELYIHRIGRSGRFGRKGVAISFVKSDDIRILRDI 184
NYD PN+ E Y+HRIGR+ R KG A +F +++ R++
Sbjct: 413 NYDYPNSSEDYVHRIGRTARSTNKGTAYTFFTPGNLKQAREL 454
Score = 120 (47.3 bits), Expect = 6.0e-30, Sum P(2) = 6.0e-30
Identities = 28/75 (37%), Positives = 37/75 (49%)
Query: 8 CI-GGTNLSEDLRKLDYGQHVVSGTPGRVFDMIRRRVLRTRNIKMLVLDEADEMLNKGFK 66
CI GG +R L+ G + TPGR+ D + R LVLDEAD ML+ GF+
Sbjct: 198 CIYGGAPKGPQIRDLERGVEICIATPGRLIDFLESGKTNLRRCTYLVLDEADRMLDMGFE 257
Query: 67 EQIYDVYRYLPPATQ 81
QI + + P Q
Sbjct: 258 PQIRKIVDQIRPDRQ 272
>MGI|MGI:1914290 [details] [associations]
symbol:Ddx17 "DEAD (Asp-Glu-Ala-Asp) box polypeptide 17"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0003713 "transcription coactivator activity" evidence=ISO]
[GO:0003723 "RNA binding" evidence=IEA] [GO:0004386 "helicase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISO] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0009791
"post-embryonic development" evidence=IMP] [GO:0016787 "hydrolase
activity" evidence=IEA] [GO:0030331 "estrogen receptor binding"
evidence=ISO] [GO:0033148 "positive regulation of intracellular
estrogen receptor signaling pathway" evidence=ISO] [GO:0045944
"positive regulation of transcription from RNA polymerase II
promoter" evidence=ISO] [GO:0072358 "cardiovascular system
development" evidence=IMP] [GO:2001014 "regulation of skeletal
muscle cell differentiation" evidence=ISO] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 MGI:MGI:1914290
GO:GO:0005524 GO:GO:0005634 GO:GO:0005730 GO:GO:0045944
GO:GO:0006351 GO:GO:0003723 GO:GO:0003713 GO:GO:0009791
GO:GO:0033148 GO:GO:0030331 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 CTD:10521 HOVERGEN:HBG015893 KO:K13178
ChiTaRS:DDX17 GO:GO:2001014 EMBL:AK039888 EMBL:BC062910
EMBL:BC096036 IPI:IPI00396797 IPI:IPI00405364 RefSeq:NP_001035277.1
RefSeq:NP_951061.1 RefSeq:NP_951062.1 UniGene:Mm.29644
UniGene:Mm.298199 ProteinModelPortal:Q501J6 SMR:Q501J6
IntAct:Q501J6 STRING:Q501J6 PhosphoSite:Q501J6
REPRODUCTION-2DPAGE:IPI00405364 PaxDb:Q501J6 PRIDE:Q501J6
GeneID:67040 KEGG:mmu:67040 UCSC:uc007wtq.1 UCSC:uc007wtt.1
InParanoid:Q501J6 OrthoDB:EOG4QRH3N NextBio:323386 Bgee:Q501J6
CleanEx:MM_DDX17 Genevestigator:Q501J6
GermOnline:ENSMUSG00000055065 GO:GO:0072358 Uniprot:Q501J6
Length = 650
Score = 245 (91.3 bits), Expect = 6.0e-30, Sum P(2) = 6.0e-30
Identities = 47/102 (46%), Positives = 66/102 (64%)
Query: 83 DWLTEKMREANFTVSSMHGDMPQKERDGIMKEFRSGTSRVLITTDVWARGIDVQQVSLVI 142
D LT +MR + +HGD Q ERD ++ EFRSG + +LI TDV +RG+DV+ V VI
Sbjct: 353 DDLTRRMRRDGWPAMCIHGDKSQPERDWVLNEFRSGKAPILIATDVASRGLDVEDVKFVI 412
Query: 143 NYDLPNNRELYIHRIGRSGRFGRKGVAISFVKSDDIRILRDI 184
NYD PN+ E Y+HRIGR+ R KG A +F +++ R++
Sbjct: 413 NYDYPNSSEDYVHRIGRTARSTNKGTAYTFFTPGNLKQAREL 454
Score = 120 (47.3 bits), Expect = 6.0e-30, Sum P(2) = 6.0e-30
Identities = 28/75 (37%), Positives = 37/75 (49%)
Query: 8 CI-GGTNLSEDLRKLDYGQHVVSGTPGRVFDMIRRRVLRTRNIKMLVLDEADEMLNKGFK 66
CI GG +R L+ G + TPGR+ D + R LVLDEAD ML+ GF+
Sbjct: 198 CIYGGAPKGPQIRDLERGVEICIATPGRLIDFLESGKTNLRRCTYLVLDEADRMLDMGFE 257
Query: 67 EQIYDVYRYLPPATQ 81
QI + + P Q
Sbjct: 258 PQIRKIVDQIRPDRQ 272
>MGI|MGI:105037 [details] [associations]
symbol:Ddx5 "DEAD (Asp-Glu-Ala-Asp) box polypeptide 5"
species:10090 "Mus musculus" [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=ISO]
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0000381
"regulation of alternative mRNA splicing, via spliceosome"
evidence=ISO] [GO:0001701 "in utero embryonic development"
evidence=IMP] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0003712 "transcription cofactor activity" evidence=IDA]
[GO:0003713 "transcription coactivator activity" evidence=ISO]
[GO:0003723 "RNA binding" evidence=IEA] [GO:0003724 "RNA helicase
activity" evidence=ISO] [GO:0004004 "ATP-dependent RNA helicase
activity" evidence=ISO] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005516 "calmodulin binding" evidence=ISO] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IC]
[GO:0005681 "spliceosomal complex" evidence=IEA] [GO:0005730
"nucleolus" evidence=ISO] [GO:0006200 "ATP catabolic process"
evidence=ISO] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0006397 "mRNA processing"
evidence=IEA] [GO:0007623 "circadian rhythm" evidence=IMP]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0008380 "RNA splicing" evidence=IEA] [GO:0016787 "hydrolase
activity" evidence=IEA] [GO:0016818 "hydrolase activity, acting on
acid anhydrides, in phosphorus-containing anhydrides" evidence=IEA]
[GO:0019899 "enzyme binding" evidence=ISO] [GO:0030331 "estrogen
receptor binding" evidence=ISO] [GO:0030529 "ribonucleoprotein
complex" evidence=ISO] [GO:0033148 "positive regulation of
intracellular estrogen receptor signaling pathway" evidence=ISO]
[GO:0036002 "pre-mRNA binding" evidence=ISO] [GO:0043517 "positive
regulation of DNA damage response, signal transduction by p53 class
mediator" evidence=ISO] [GO:0045069 "regulation of viral genome
replication" evidence=ISO] [GO:0045667 "regulation of osteoblast
differentiation" evidence=IMP] [GO:0045893 "positive regulation of
transcription, DNA-dependent" evidence=IDA] [GO:0045944 "positive
regulation of transcription from RNA polymerase II promoter"
evidence=ISO] [GO:0048306 "calcium-dependent protein binding"
evidence=ISO] [GO:0050681 "androgen receptor binding" evidence=ISO]
[GO:0060765 "regulation of androgen receptor signaling pathway"
evidence=ISO] [GO:0071013 "catalytic step 2 spliceosome"
evidence=ISO] [GO:0072332 "intrinsic apoptotic signaling pathway by
p53 class mediator" evidence=ISO] [GO:2001014 "regulation of
skeletal muscle cell differentiation" evidence=IMP]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
InterPro:IPR012587 Pfam:PF00270 Pfam:PF00271 Pfam:PF08061
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 MGI:MGI:105037
GO:GO:0005524 GO:GO:0005730 GO:GO:0008380 GO:GO:0007623
GO:GO:0001701 GO:GO:0006397 GO:GO:0045944 GO:GO:0006351
GO:GO:0005681 GO:GO:0003723 GO:GO:0000122 GO:GO:0003713
GO:GO:0030529 GO:GO:0050681 GO:GO:0043517 GO:GO:0030331
GO:GO:0060765 GO:GO:0045667 GO:GO:0072332 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 GO:GO:0000381
EMBL:AL603664 eggNOG:COG0513 GO:GO:0003724 InterPro:IPR014014
PROSITE:PS51195 HOVERGEN:HBG015893 GO:GO:2001014 OrthoDB:EOG4BVRTM
ChiTaRS:DDX5 EMBL:X65627 IPI:IPI00420363 PIR:I48385
UniGene:Mm.220038 ProteinModelPortal:Q61656 SMR:Q61656
DIP:DIP-32293N IntAct:Q61656 STRING:Q61656 PhosphoSite:Q61656
PaxDb:Q61656 PRIDE:Q61656 InParanoid:Q61656 CleanEx:MM_DDX5
Genevestigator:Q61656 GermOnline:ENSMUSG00000020719 Uniprot:Q61656
Length = 614
Score = 245 (91.3 bits), Expect = 7.6e-30, Sum P(2) = 7.6e-30
Identities = 47/102 (46%), Positives = 67/102 (65%)
Query: 83 DWLTEKMREANFTVSSMHGDMPQKERDGIMKEFRSGTSRVLITTDVWARGIDVQQVSLVI 142
D LT KMR + +HGD Q+ERD ++ EF+ G + +LI TDV +RG+DV+ V VI
Sbjct: 355 DELTRKMRRDGWPAMGIHGDKSQQERDWVLNEFKHGKAPILIATDVASRGLDVEDVKFVI 414
Query: 143 NYDLPNNRELYIHRIGRSGRFGRKGVAISFVKSDDIRILRDI 184
NYD PN+ E YIHRIGR+ R + G A +F ++I+ + D+
Sbjct: 415 NYDYPNSSEDYIHRIGRTARSTKTGTAYTFFTPNNIKQVSDL 456
Score = 118 (46.6 bits), Expect = 7.6e-30, Sum P(2) = 7.6e-30
Identities = 28/75 (37%), Positives = 37/75 (49%)
Query: 8 CI-GGTNLSEDLRKLDYGQHVVSGTPGRVFDMIRRRVLRTRNIKMLVLDEADEMLNKGFK 66
CI GG +R L+ G + TPGR+ D + R LVLDEAD ML+ GF+
Sbjct: 200 CIYGGAPKGPQIRDLERGVEICIATPGRLIDFLECGKTNLRRTTYLVLDEADRMLDMGFE 259
Query: 67 EQIYDVYRYLPPATQ 81
QI + + P Q
Sbjct: 260 PQIRKIVDQIRPDRQ 274
>ASPGD|ASPL0000077157 [details] [associations]
symbol:AN10557 species:162425 "Emericella nidulans"
[GO:0071470 "cellular response to osmotic stress" evidence=IEA]
[GO:0007346 "regulation of mitotic cell cycle" evidence=IEA]
[GO:0031137 "regulation of conjugation with cellular fusion"
evidence=IEA] [GO:0002183 "cytoplasmic translational initiation"
evidence=IEA] [GO:0031047 "gene silencing by RNA" evidence=IEA]
[GO:0010628 "positive regulation of gene expression" evidence=IEA]
[GO:0097308 "cellular response to farnesol" evidence=IEP]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005829 "cytosol"
evidence=IEA] [GO:0004004 "ATP-dependent RNA helicase activity"
evidence=IEA] [GO:0033592 "RNA strand annealing activity"
evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0005737
GO:GO:0003743 EMBL:BN001303 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
OMA:GNWANAN EMBL:AACD01000077 ProteinModelPortal:C8V8H4 SMR:C8V8H4
PRIDE:C8V8H4 EnsemblFungi:CADANIAT00005985 Uniprot:C8V8H4
Length = 668
Score = 227 (85.0 bits), Expect = 7.7e-30, Sum P(2) = 7.7e-30
Identities = 45/114 (39%), Positives = 70/114 (61%)
Query: 83 DWLTEKMREANFTVSSMHGDMPQKERDGIMKEFRSGTSRVLITTDVWARGIDVQQVSLVI 142
D L+E + F +++HGD Q+ER+ ++ FRSG +L+ T V ARG+D+ V+ VI
Sbjct: 460 DALSEFLINQRFPATAIHGDRTQRERERALEMFRSGRYPILVATAVAARGLDIPNVTHVI 519
Query: 143 NYDLPNNRELYIHRIGRSGRFGRKGVAISFVKSDDIRILRDIEQYYSTQIDEMP 196
NYDLP + + Y+HRIGR+GR G G+A +F + ++RD+ E+P
Sbjct: 520 NYDLPTDIDDYVHRIGRTGRAGNTGIATAFFNRGNRGVVRDLIDLLKEAHQEVP 573
Score = 138 (53.6 bits), Expect = 7.7e-30, Sum P(2) = 7.7e-30
Identities = 28/64 (43%), Positives = 42/64 (65%)
Query: 8 CI--GGTNLSEDLRKLDYGQHVVSGTPGRVFDMIRRRVLRTRNIKMLVLDEADEMLNKGF 65
C+ GG ++ LR+++ G ++ TPGR+ D+I R + NIK L+LDEAD ML+ GF
Sbjct: 303 CVVYGGADIGSQLRQIERGCDLLVATPGRLVDLIERGRISLVNIKYLILDEADRMLDMGF 362
Query: 66 KEQI 69
+ QI
Sbjct: 363 EPQI 366
>UNIPROTKB|Q4K4K3 [details] [associations]
symbol:dbpA "ATP-independent RNA helicase DbpA"
species:220664 "Pseudomonas protegens Pf-5" [GO:0003724 "RNA
helicase activity" evidence=ISS] [GO:0042254 "ribosome biogenesis"
evidence=ISS] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0003676
GO:GO:0042254 EMBL:CP000076 GenomeReviews:CP000076_GR
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
eggNOG:COG0513 GO:GO:0003724 InterPro:IPR014014 PROSITE:PS51195
HOGENOM:HOG000268809 KO:K05591 ProtClustDB:PRK11776
InterPro:IPR005580 Pfam:PF03880 OMA:THEKSTI RefSeq:YP_262830.1
ProteinModelPortal:Q4K4K3 STRING:Q4K4K3 GeneID:3480144
KEGG:pfl:PFL_5772 PATRIC:19881049
BioCyc:PFLU220664:GIX8-5812-MONOMER Uniprot:Q4K4K3
Length = 461
Score = 216 (81.1 bits), Expect = 9.2e-30, Sum P(2) = 9.2e-30
Identities = 45/123 (36%), Positives = 72/123 (58%)
Query: 82 VDWLTEKMREANFTVSSMHGDMPQKERDGIMKEFRSGTSRVLITTDVWARGIDVQQVSLV 141
VD LT K + +HGD+ Q++RD ++ F + ++ VL+ TDV ARG+D+ + +V
Sbjct: 261 VDHLTAK----GISAVGLHGDLEQRDRDQVLAMFANRSTSVLVATDVAARGLDIDALDMV 316
Query: 142 INYDLPNNRELYIHRIGRSGRFGRKGVAISFVKSDDIRILRDIEQYYST-----QIDEMP 196
IN +L + E++IHR+GR+GR G KG+A+S V + + IEQ Q+D +
Sbjct: 317 INVELARDSEIHIHRVGRTGRAGEKGIAVSLVAPSEAHRAQAIEQLQKAPLNWDQVDNLK 376
Query: 197 MNG 199
G
Sbjct: 377 SQG 379
Score = 142 (55.0 bits), Expect = 9.2e-30, Sum P(2) = 9.2e-30
Identities = 28/80 (35%), Positives = 43/80 (53%)
Query: 2 NVQCHACIGGTNLSEDLRKLDYGQHVVSGTPGRVFDMIRRRVLRTRNIKMLVLDEADEML 61
N++ GG + + L++G H++ GTPGR+ +R+ L + LVLDEAD ML
Sbjct: 103 NIKVLTLCGGVSFGPQIASLEHGAHIIVGTPGRIQQHLRKGSLVLDGLNTLVLDEADRML 162
Query: 62 NKGFKEQIYDVYRYLPPATQ 81
+ GF + I D+ P Q
Sbjct: 163 DMGFYDAIEDIIEKTPSRRQ 182
>UNIPROTKB|Q92841 [details] [associations]
symbol:DDX17 "Probable ATP-dependent RNA helicase DDX17"
species:9606 "Homo sapiens" [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0005730 "nucleolus" evidence=IEA]
[GO:0003713 "transcription coactivator activity" evidence=IDA]
[GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=IDA] [GO:0033148 "positive
regulation of intracellular estrogen receptor signaling pathway"
evidence=IDA] [GO:0030331 "estrogen receptor binding" evidence=IDA]
[GO:0005634 "nucleus" evidence=IDA] [GO:2001014 "regulation of
skeletal muscle cell differentiation" evidence=IMP] [GO:0005515
"protein binding" evidence=IPI] [GO:0003724 "RNA helicase activity"
evidence=TAS] [GO:0006396 "RNA processing" evidence=TAS]
[GO:0008186 "RNA-dependent ATPase activity" evidence=TAS]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0005634 GO:GO:0005730
EMBL:CH471095 GO:GO:0045944 GO:GO:0006351 GO:GO:0003723
GO:GO:0006396 GO:GO:0003713 GO:GO:0033148 GO:GO:0030331
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
eggNOG:COG0513 GO:GO:0003724 InterPro:IPR014014 PROSITE:PS51195
HOGENOM:HOG000268804 GO:GO:0008186 EMBL:U59321 EMBL:CR456432
EMBL:AL713763 EMBL:Z97056 EMBL:BC000595 IPI:IPI00651653
IPI:IPI00651677 IPI:IPI00889541 IPI:IPI01022339 PIR:S72367
RefSeq:NP_006377.2 UniGene:Hs.706116 UniGene:Hs.725500
ProteinModelPortal:Q92841 SMR:Q92841 DIP:DIP-29843N IntAct:Q92841
MINT:MINT-4545892 STRING:Q92841 PhosphoSite:Q92841 DMDM:3122595
REPRODUCTION-2DPAGE:IPI00023785 PaxDb:Q92841 PRIDE:Q92841
DNASU:10521 Ensembl:ENST00000403230 GeneID:10521 KEGG:hsa:10521
UCSC:uc003avx.4 CTD:10521 GeneCards:GC22M038879 HGNC:HGNC:2740
HPA:CAB024908 MIM:608469 neXtProt:NX_Q92841 PharmGKB:PA27206
HOVERGEN:HBG015893 InParanoid:Q92841 KO:K13178 ChiTaRS:DDX17
GenomeRNAi:10521 NextBio:39902 ArrayExpress:Q92841 Bgee:Q92841
CleanEx:HS_DDX17 Genevestigator:Q92841 GermOnline:ENSG00000100201
GO:GO:2001014 Uniprot:Q92841
Length = 729
Score = 245 (91.3 bits), Expect = 9.3e-30, Sum P(2) = 9.3e-30
Identities = 47/102 (46%), Positives = 66/102 (64%)
Query: 83 DWLTEKMREANFTVSSMHGDMPQKERDGIMKEFRSGTSRVLITTDVWARGIDVQQVSLVI 142
D LT +MR + +HGD Q ERD ++ EFRSG + +LI TDV +RG+DV+ V VI
Sbjct: 432 DDLTRRMRRDGWPAMCIHGDKSQPERDWVLNEFRSGKAPILIATDVASRGLDVEDVKFVI 491
Query: 143 NYDLPNNRELYIHRIGRSGRFGRKGVAISFVKSDDIRILRDI 184
NYD PN+ E Y+HRIGR+ R KG A +F +++ R++
Sbjct: 492 NYDYPNSSEDYVHRIGRTARSTNKGTAYTFFTPGNLKQAREL 533
Score = 120 (47.3 bits), Expect = 9.3e-30, Sum P(2) = 9.3e-30
Identities = 28/75 (37%), Positives = 37/75 (49%)
Query: 8 CI-GGTNLSEDLRKLDYGQHVVSGTPGRVFDMIRRRVLRTRNIKMLVLDEADEMLNKGFK 66
CI GG +R L+ G + TPGR+ D + R LVLDEAD ML+ GF+
Sbjct: 277 CIYGGAPKGPQIRDLERGVEICIATPGRLIDFLESGKTNLRRCTYLVLDEADRMLDMGFE 336
Query: 67 EQIYDVYRYLPPATQ 81
QI + + P Q
Sbjct: 337 PQIRKIVDQIRPDRQ 351
>UNIPROTKB|H3BLZ8 [details] [associations]
symbol:DDX17 "Probable ATP-dependent RNA helicase DDX17"
species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0009791
"post-embryonic development" evidence=IEA] [GO:0072358
"cardiovascular system development" evidence=IEA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0003676 GO:GO:0009791
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 EMBL:Z97056 HGNC:HGNC:2740
ChiTaRS:DDX17 GO:GO:0072358 ProteinModelPortal:H3BLZ8 SMR:H3BLZ8
Ensembl:ENST00000396821 Bgee:H3BLZ8 Uniprot:H3BLZ8
Length = 731
Score = 245 (91.3 bits), Expect = 9.4e-30, Sum P(2) = 9.4e-30
Identities = 47/102 (46%), Positives = 66/102 (64%)
Query: 83 DWLTEKMREANFTVSSMHGDMPQKERDGIMKEFRSGTSRVLITTDVWARGIDVQQVSLVI 142
D LT +MR + +HGD Q ERD ++ EFRSG + +LI TDV +RG+DV+ V VI
Sbjct: 432 DDLTRRMRRDGWPAMCIHGDKSQPERDWVLNEFRSGKAPILIATDVASRGLDVEDVKFVI 491
Query: 143 NYDLPNNRELYIHRIGRSGRFGRKGVAISFVKSDDIRILRDI 184
NYD PN+ E Y+HRIGR+ R KG A +F +++ R++
Sbjct: 492 NYDYPNSSEDYVHRIGRTARSTNKGTAYTFFTPGNLKQAREL 533
Score = 120 (47.3 bits), Expect = 9.4e-30, Sum P(2) = 9.4e-30
Identities = 28/75 (37%), Positives = 37/75 (49%)
Query: 8 CI-GGTNLSEDLRKLDYGQHVVSGTPGRVFDMIRRRVLRTRNIKMLVLDEADEMLNKGFK 66
CI GG +R L+ G + TPGR+ D + R LVLDEAD ML+ GF+
Sbjct: 277 CIYGGAPKGPQIRDLERGVEICIATPGRLIDFLESGKTNLRRCTYLVLDEADRMLDMGFE 336
Query: 67 EQIYDVYRYLPPATQ 81
QI + + P Q
Sbjct: 337 PQIRKIVDQIRPDRQ 351
>UNIPROTKB|F1PID8 [details] [associations]
symbol:DDX17 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
GeneTree:ENSGT00660000095174 OMA:QQFPQPP EMBL:AAEX03007314
Ensembl:ENSCAFT00000002162 Uniprot:F1PID8
Length = 736
Score = 245 (91.3 bits), Expect = 9.6e-30, Sum P(2) = 9.6e-30
Identities = 47/102 (46%), Positives = 66/102 (64%)
Query: 83 DWLTEKMREANFTVSSMHGDMPQKERDGIMKEFRSGTSRVLITTDVWARGIDVQQVSLVI 142
D LT +MR + +HGD Q ERD ++ EFRSG + +LI TDV +RG+DV+ V VI
Sbjct: 434 DDLTRRMRRDGWPAMCIHGDKSQPERDWVLNEFRSGKAPILIATDVASRGLDVEDVKFVI 493
Query: 143 NYDLPNNRELYIHRIGRSGRFGRKGVAISFVKSDDIRILRDI 184
NYD PN+ E Y+HRIGR+ R KG A +F +++ R++
Sbjct: 494 NYDYPNSSEDYVHRIGRTARSTNKGTAYTFFTPGNLKQAREL 535
Score = 120 (47.3 bits), Expect = 9.6e-30, Sum P(2) = 9.6e-30
Identities = 28/75 (37%), Positives = 37/75 (49%)
Query: 8 CI-GGTNLSEDLRKLDYGQHVVSGTPGRVFDMIRRRVLRTRNIKMLVLDEADEMLNKGFK 66
CI GG +R L+ G + TPGR+ D + R LVLDEAD ML+ GF+
Sbjct: 279 CIYGGAPKGPQIRDLERGVEICIATPGRLIDFLESGKTNLRRCTYLVLDEADRMLDMGFE 338
Query: 67 EQIYDVYRYLPPATQ 81
QI + + P Q
Sbjct: 339 PQIRKIVDQIRPDRQ 353
>UNIPROTKB|F1SKQ0 [details] [associations]
symbol:DDX17 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0072358 "cardiovascular system development"
evidence=IEA] [GO:0009791 "post-embryonic development"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 GO:GO:0009791 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
GeneTree:ENSGT00660000095174 GO:GO:0072358 OMA:QQFPQPP
EMBL:FP102457 Ensembl:ENSSSCT00000000110 Uniprot:F1SKQ0
Length = 736
Score = 245 (91.3 bits), Expect = 9.6e-30, Sum P(2) = 9.6e-30
Identities = 47/102 (46%), Positives = 66/102 (64%)
Query: 83 DWLTEKMREANFTVSSMHGDMPQKERDGIMKEFRSGTSRVLITTDVWARGIDVQQVSLVI 142
D LT +MR + +HGD Q ERD ++ EFRSG + +LI TDV +RG+DV+ V VI
Sbjct: 434 DDLTRRMRRDGWPAMCIHGDKSQPERDWVLNEFRSGKAPILIATDVASRGLDVEDVKFVI 493
Query: 143 NYDLPNNRELYIHRIGRSGRFGRKGVAISFVKSDDIRILRDI 184
NYD PN+ E Y+HRIGR+ R KG A +F +++ R++
Sbjct: 494 NYDYPNSSEDYVHRIGRTARSTNKGTAYTFFTPGNLKQAREL 535
Score = 120 (47.3 bits), Expect = 9.6e-30, Sum P(2) = 9.6e-30
Identities = 28/75 (37%), Positives = 37/75 (49%)
Query: 8 CI-GGTNLSEDLRKLDYGQHVVSGTPGRVFDMIRRRVLRTRNIKMLVLDEADEMLNKGFK 66
CI GG +R L+ G + TPGR+ D + R LVLDEAD ML+ GF+
Sbjct: 279 CIYGGAPKGPQIRDLERGVEICIATPGRLIDFLESGKTNLRRCTYLVLDEADRMLDMGFE 338
Query: 67 EQIYDVYRYLPPATQ 81
QI + + P Q
Sbjct: 339 PQIRKIVDQIRPDRQ 353
>TIGR_CMR|CPS_1418 [details] [associations]
symbol:CPS_1418 "ATP-dependent RNA helicase, DEAD box
family" species:167879 "Colwellia psychrerythraea 34H" [GO:0004004
"ATP-dependent RNA helicase activity" evidence=ISS] [GO:0016070
"RNA metabolic process" evidence=ISS] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 EMBL:CP000083 GenomeReviews:CP000083_GR
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195 OMA:FRNLCAI
HOGENOM:HOG000268807 RefSeq:YP_268161.1 ProteinModelPortal:Q485V4
GeneID:3523021 KEGG:cps:CPS_1418 PATRIC:21466051
BioCyc:CPSY167879:GI48-1499-MONOMER Uniprot:Q485V4
Length = 401
Score = 208 (78.3 bits), Expect = 9.6e-30, Sum P(2) = 9.6e-30
Identities = 43/101 (42%), Positives = 61/101 (60%)
Query: 85 LTEKMREANFTVSSMHGDMPQKERDGIMKEFRSGTSRVLITTDVWARGIDVQQVSLVINY 144
L ++ + S+H Q R+ I+ +F+SG + L+ T + ARG+D+ ++S VINY
Sbjct: 264 LVSQLEKRGIVAESIHSGRAQDIREKILNDFKSGKIKFLVATAIAARGLDIGELSRVINY 323
Query: 145 DLPNNRELYIHRIGRSGRFGRKGVAISFVKSDDIRILRDIE 185
DLP + YIHRIGR+GR G G AIS V D+ R L IE
Sbjct: 324 DLPAQVDDYIHRIGRTGRAGASGEAISLVSKDNFRELCAIE 364
Score = 147 (56.8 bits), Expect = 9.6e-30, Sum P(2) = 9.6e-30
Identities = 31/81 (38%), Positives = 46/81 (56%)
Query: 1 MNVQCHACIGGTNLSEDLRKLDYGQHVVSGTPGRVFDMIRRRVLRTRNIKMLVLDEADEM 60
+++ A GG + E ++L +G ++ TPGR+ DM +RVL + MLVLDEAD M
Sbjct: 105 LDISSMAMYGGVDAQEQKQRLIWGVDILVATPGRLLDMTHQRVLHFDELDMLVLDEADRM 164
Query: 61 LNKGFKEQIYDVYRYLPPATQ 81
L+ GF + I + LP Q
Sbjct: 165 LDMGFIDDINKIIERLPEHRQ 185
>UNIPROTKB|E2RR50 [details] [associations]
symbol:DDX19A "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014
PROSITE:PS51195 OMA:PQAICLA GeneTree:ENSGT00530000063236 CTD:55308
EMBL:AAEX03004077 RefSeq:XP_536790.2 ProteinModelPortal:E2RR50
Ensembl:ENSCAFT00000032061 GeneID:479658 KEGG:cfa:479658
NextBio:20854805 Uniprot:E2RR50
Length = 478
Score = 250 (93.1 bits), Expect = 1.0e-29, Sum P(2) = 1.0e-29
Identities = 48/119 (40%), Positives = 83/119 (69%)
Query: 84 WLTEKMREANFTVSSMHGDMPQKERDGIMKEFRSGTSRVLITTDVWARGIDVQQVSLVIN 143
WL ++ + V+ + G+M ++R +++ FR G +VL+TT+V ARGIDV+QVS+VIN
Sbjct: 347 WLAAELSKEGHQVALLSGEMMVEQRAAVIERFREGKEKVLVTTNVCARGIDVEQVSVVIN 406
Query: 144 YDLPNNR------ELYIHRIGRSGRFGRKGVAISFVKSD-DIRILRDIEQYYSTQIDEM 195
+DLP ++ E Y+HRIGR+GRFG++G+A++ V S + IL I+++++ +I+ +
Sbjct: 407 FDLPVDKDGNPDNETYLHRIGRTGRFGKRGLAVNMVDSKHSMNILNRIQEHFNKKIERL 465
Score = 106 (42.4 bits), Expect = 1.0e-29, Sum P(2) = 1.0e-29
Identities = 27/69 (39%), Positives = 40/69 (57%)
Query: 20 KLDYGQ----HVVSGTPGRVFDMIRR-RVLRTRNIKMLVLDEADEML-NKGFKEQIYDVY 73
KL+ GQ H+V GTPG V D + + + + IK+ VLDEAD M+ +G ++Q +
Sbjct: 201 KLERGQKISEHIVIGTPGTVLDWCSKLKFIDPKKIKVFVLDEADVMIATQGHQDQSIRIQ 260
Query: 74 RYLPPATQV 82
R LP Q+
Sbjct: 261 RMLPKNCQM 269
>UNIPROTKB|B4DRZ7 [details] [associations]
symbol:DDX19A "ATP-dependent RNA helicase DDX19A"
species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 HOVERGEN:HBG107989
UniGene:Hs.656037 HGNC:HGNC:25628 EMBL:AC012184 EMBL:AK299504
IPI:IPI01009735 SMR:B4DRZ7 STRING:B4DRZ7 Ensembl:ENST00000443119
UCSC:uc002eys.3 Uniprot:B4DRZ7
Length = 388
Score = 250 (93.1 bits), Expect = 1.1e-29, Sum P(2) = 1.1e-29
Identities = 48/119 (40%), Positives = 83/119 (69%)
Query: 84 WLTEKMREANFTVSSMHGDMPQKERDGIMKEFRSGTSRVLITTDVWARGIDVQQVSLVIN 143
WL ++ + V+ + G+M ++R +++ FR G +VL+TT+V ARGIDV+QVS+VIN
Sbjct: 257 WLAAELSKEGHQVALLSGEMMVEQRAAVIERFREGKEKVLVTTNVCARGIDVEQVSVVIN 316
Query: 144 YDLPNNR------ELYIHRIGRSGRFGRKGVAISFVKSD-DIRILRDIEQYYSTQIDEM 195
+DLP ++ E Y+HRIGR+GRFG++G+A++ V S + IL I+++++ +I+ +
Sbjct: 317 FDLPVDKDGNPDNETYLHRIGRTGRFGKRGLAVNMVDSKHSMNILNRIQEHFNKKIERL 375
Score = 97 (39.2 bits), Expect = 1.1e-29, Sum P(2) = 1.1e-29
Identities = 26/69 (37%), Positives = 39/69 (56%)
Query: 20 KLDYGQ----HVVSGTPGRVFDMIRR-RVLRTRNIKMLVLDEADEML-NKGFKEQIYDVY 73
KL+ GQ +V GTPG V D + + + + IK+ VLDEAD M+ +G ++Q +
Sbjct: 111 KLERGQKISEQIVIGTPGTVLDWCSKLKFIDPKKIKVFVLDEADVMIATQGHQDQSIRIQ 170
Query: 74 RYLPPATQV 82
R LP Q+
Sbjct: 171 RMLPRNCQM 179
>TIGR_CMR|GSU_0522 [details] [associations]
symbol:GSU_0522 "ATP-dependent RNA helicase RhlB"
species:243231 "Geobacter sulfurreducens PCA" [GO:0004004
"ATP-dependent RNA helicase activity" evidence=ISS] [GO:0006401
"RNA catabolic process" evidence=ISS] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 EMBL:AE017180 GenomeReviews:AE017180_GR
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 HOGENOM:HOG000268807 KO:K03732
RefSeq:NP_951580.1 ProteinModelPortal:Q74FT4 GeneID:2685920
KEGG:gsu:GSU0522 PATRIC:22023799 OMA:LAYEFMN ProtClustDB:CLSK827899
BioCyc:GSUL243231:GH27-482-MONOMER Uniprot:Q74FT4
Length = 443
Score = 215 (80.7 bits), Expect = 1.2e-29, Sum P(2) = 1.2e-29
Identities = 44/112 (39%), Positives = 69/112 (61%)
Query: 81 QVDWLTEKMREANFTVSSMHGDMPQKERDGIMKEFRSGTSRVLITTDVWARGIDVQQVSL 140
+ ++L E++ +F + GD+ Q++R I+++F+SG ++I TDV +RG+ + VS
Sbjct: 258 EAEFLDERLNANDFPCRVISGDVEQRKRLKILEDFKSGKLPIMIATDVASRGLHIDGVSH 317
Query: 141 VINYDLPNNRELYIHRIGRSGRFGRKGVAISFVKSDDIRILRDIEQYYSTQI 192
VINYDLP + E Y+HRIGR+ R G +G AIS D L I +Y +I
Sbjct: 318 VINYDLPQDAEDYVHRIGRTARAGAEGKAISMADEDGAFHLEAIHEYIKDKI 369
Score = 141 (54.7 bits), Expect = 1.2e-29, Sum P(2) = 1.2e-29
Identities = 29/72 (40%), Positives = 42/72 (58%)
Query: 7 ACIGGTNLSEDLRKLDYGQHVVSGTPGRVFDMIRRRVLRTRNIKMLVLDEADEMLNKGFK 66
A GG + + L G VV GTPGR+ D ++++V + I+MLV+DEAD M + GF
Sbjct: 107 AIYGGVDYMKQKNALKEGADVVVGTPGRLIDYLKQKVYSLKEIEMLVIDEADRMFDMGFI 166
Query: 67 EQIYDVYRYLPP 78
+ + R LPP
Sbjct: 167 ADLRFILRRLPP 178
>UNIPROTKB|Q3ZBV2 [details] [associations]
symbol:DDX19A "ATP-dependent RNA helicase DDX19A"
species:9913 "Bos taurus" [GO:0031965 "nuclear membrane"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005643
"nuclear pore" evidence=IEA] [GO:0051028 "mRNA transport"
evidence=IEA] [GO:0015031 "protein transport" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0003723 "RNA binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270
Pfam:PF00271 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0005737 GO:GO:0015031 GO:GO:0031965 GO:GO:0005643
GO:GO:0003723 GO:GO:0051028 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 KO:K01529 GO:GO:0008026 eggNOG:COG0513
HOGENOM:HOG000268797 InterPro:IPR014014 PROSITE:PS51195
GeneTree:ENSGT00530000063236 EMBL:BC103093 IPI:IPI00788586
RefSeq:NP_001029743.1 UniGene:Bt.49612 HSSP:Q9UHL0
ProteinModelPortal:Q3ZBV2 SMR:Q3ZBV2 PRIDE:Q3ZBV2
Ensembl:ENSBTAT00000004645 GeneID:529929 KEGG:bta:529929 CTD:55308
HOVERGEN:HBG107989 InParanoid:Q3ZBV2 OMA:MMAINTI OrthoDB:EOG46MBJK
NextBio:20875139 ArrayExpress:Q3ZBV2 Uniprot:Q3ZBV2
Length = 478
Score = 250 (93.1 bits), Expect = 1.3e-29, Sum P(2) = 1.3e-29
Identities = 48/119 (40%), Positives = 83/119 (69%)
Query: 84 WLTEKMREANFTVSSMHGDMPQKERDGIMKEFRSGTSRVLITTDVWARGIDVQQVSLVIN 143
WL ++ + V+ + G+M ++R +++ FR G +VL+TT+V ARGIDV+QVS+VIN
Sbjct: 347 WLAAELSKEGHQVALLSGEMVVEQRAAVIERFREGKEKVLVTTNVCARGIDVEQVSVVIN 406
Query: 144 YDLPNNR------ELYIHRIGRSGRFGRKGVAISFVKSD-DIRILRDIEQYYSTQIDEM 195
+DLP ++ E Y+HRIGR+GRFG++G+A++ V S + IL I+++++ +I+ +
Sbjct: 407 FDLPVDKDGNPDNETYLHRIGRTGRFGKRGLAVNMVDSKHSMNILNRIQEHFNKKIERL 465
Score = 105 (42.0 bits), Expect = 1.3e-29, Sum P(2) = 1.3e-29
Identities = 27/69 (39%), Positives = 40/69 (57%)
Query: 20 KLDYGQ----HVVSGTPGRVFDMIRR-RVLRTRNIKMLVLDEADEML-NKGFKEQIYDVY 73
KL+ GQ H+V GTPG V D + + + + IK+ VLDEAD M+ +G ++Q +
Sbjct: 201 KLERGQKISEHIVIGTPGTVLDWCSKLKFIDPKKIKVFVLDEADVMIATQGHQDQSIRIQ 260
Query: 74 RYLPPATQV 82
R LP Q+
Sbjct: 261 RMLPRNCQM 269
>UNIPROTKB|I3LC00 [details] [associations]
symbol:DDX19A "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014
PROSITE:PS51195 OMA:PQAICLA GeneTree:ENSGT00530000063236
EMBL:CU929739 RefSeq:XP_003126917.1 Ensembl:ENSSSCT00000029799
GeneID:100524144 KEGG:ssc:100524144 Uniprot:I3LC00
Length = 478
Score = 250 (93.1 bits), Expect = 1.3e-29, Sum P(2) = 1.3e-29
Identities = 48/119 (40%), Positives = 83/119 (69%)
Query: 84 WLTEKMREANFTVSSMHGDMPQKERDGIMKEFRSGTSRVLITTDVWARGIDVQQVSLVIN 143
WL ++ + V+ + G+M ++R +++ FR G +VL+TT+V ARGIDV+QVS+VIN
Sbjct: 347 WLAAELSKEGHQVALLSGEMVVEQRAAVIERFREGKEKVLVTTNVCARGIDVEQVSVVIN 406
Query: 144 YDLPNNR------ELYIHRIGRSGRFGRKGVAISFVKSD-DIRILRDIEQYYSTQIDEM 195
+DLP ++ E Y+HRIGR+GRFG++G+A++ V S + IL I+++++ +I+ +
Sbjct: 407 FDLPVDKDGNPDNETYLHRIGRTGRFGKRGLAVNMVDSKHSMNILNRIQEHFNKKIERL 465
Score = 105 (42.0 bits), Expect = 1.3e-29, Sum P(2) = 1.3e-29
Identities = 27/69 (39%), Positives = 40/69 (57%)
Query: 20 KLDYGQ----HVVSGTPGRVFDMIRR-RVLRTRNIKMLVLDEADEML-NKGFKEQIYDVY 73
KL+ GQ H+V GTPG V D + + + + IK+ VLDEAD M+ +G ++Q +
Sbjct: 201 KLERGQKISEHIVIGTPGTVLDWCSKLKFIDPKKIKVFVLDEADVMIATQGHQDQSIRIQ 260
Query: 74 RYLPPATQV 82
R LP Q+
Sbjct: 261 RMLPRNCQM 269
>UNIPROTKB|F1S432 [details] [associations]
symbol:DDX19B "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014
PROSITE:PS51195 GeneTree:ENSGT00530000063236 OMA:HETIFEV
EMBL:CU929739 Ensembl:ENSSSCT00000003016 Uniprot:F1S432
Length = 481
Score = 250 (93.1 bits), Expect = 1.4e-29, Sum P(2) = 1.4e-29
Identities = 48/119 (40%), Positives = 83/119 (69%)
Query: 84 WLTEKMREANFTVSSMHGDMPQKERDGIMKEFRSGTSRVLITTDVWARGIDVQQVSLVIN 143
WL ++ + V+ + G+M ++R +++ FR G +VL+TT+V ARGIDV+QVS+VIN
Sbjct: 350 WLAAELSKEGHQVALLSGEMVVEQRAAVIERFREGKEKVLVTTNVCARGIDVEQVSVVIN 409
Query: 144 YDLPNNR------ELYIHRIGRSGRFGRKGVAISFVKSD-DIRILRDIEQYYSTQIDEM 195
+DLP ++ E Y+HRIGR+GRFG++G+A++ V S + IL I+++++ +I+ +
Sbjct: 410 FDLPVDKDGNPDNETYLHRIGRTGRFGKRGLAVNMVDSKHSMNILNRIQEHFNKKIERL 468
Score = 105 (42.0 bits), Expect = 1.4e-29, Sum P(2) = 1.4e-29
Identities = 27/69 (39%), Positives = 40/69 (57%)
Query: 20 KLDYGQ----HVVSGTPGRVFDMIRR-RVLRTRNIKMLVLDEADEML-NKGFKEQIYDVY 73
KL+ GQ H+V GTPG V D + + + + IK+ VLDEAD M+ +G ++Q +
Sbjct: 204 KLERGQKISEHIVIGTPGTVLDWCSKLKFIDPKKIKVFVLDEADVMIATQGHQDQSIRIQ 263
Query: 74 RYLPPATQV 82
R LP Q+
Sbjct: 264 RMLPRNCQM 272
>UNIPROTKB|F1MUT6 [details] [associations]
symbol:DDX19B "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014
PROSITE:PS51195 GeneTree:ENSGT00530000063236 EMBL:DAAA02045970
IPI:IPI00704706 UniGene:Bt.37736 Ensembl:ENSBTAT00000004644
OMA:KMSMNIL Uniprot:F1MUT6
Length = 484
Score = 250 (93.1 bits), Expect = 1.4e-29, Sum P(2) = 1.4e-29
Identities = 48/119 (40%), Positives = 83/119 (69%)
Query: 84 WLTEKMREANFTVSSMHGDMPQKERDGIMKEFRSGTSRVLITTDVWARGIDVQQVSLVIN 143
WL ++ + V+ + G+M ++R +++ FR G +VL+TT+V ARGIDV+QVS+VIN
Sbjct: 353 WLAAELSKEGHQVALLSGEMVVEQRAAVIERFREGKEKVLVTTNVCARGIDVEQVSVVIN 412
Query: 144 YDLPNNR------ELYIHRIGRSGRFGRKGVAISFVKSD-DIRILRDIEQYYSTQIDEM 195
+DLP ++ E Y+HRIGR+GRFG++G+A++ V S + IL I+++++ +I+ +
Sbjct: 413 FDLPVDKDGNPDNETYLHRIGRTGRFGKRGLAVNMVDSKHSMNILNRIQEHFNKKIERL 471
Score = 105 (42.0 bits), Expect = 1.4e-29, Sum P(2) = 1.4e-29
Identities = 27/69 (39%), Positives = 40/69 (57%)
Query: 20 KLDYGQ----HVVSGTPGRVFDMIRR-RVLRTRNIKMLVLDEADEML-NKGFKEQIYDVY 73
KL+ GQ H+V GTPG V D + + + + IK+ VLDEAD M+ +G ++Q +
Sbjct: 207 KLERGQKISEHIVIGTPGTVLDWCSKLKFIDPKKIKVFVLDEADVMIATQGHQDQSIRIQ 266
Query: 74 RYLPPATQV 82
R LP Q+
Sbjct: 267 RMLPRNCQM 275
>UNIPROTKB|I3L352 [details] [associations]
symbol:DDX19A "ATP-dependent RNA helicase DDX19A"
species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 HGNC:HGNC:25628 EMBL:AC012184
Ensembl:ENST00000575878 Uniprot:I3L352
Length = 396
Score = 250 (93.1 bits), Expect = 1.5e-29, Sum P(2) = 1.5e-29
Identities = 48/119 (40%), Positives = 83/119 (69%)
Query: 84 WLTEKMREANFTVSSMHGDMPQKERDGIMKEFRSGTSRVLITTDVWARGIDVQQVSLVIN 143
WL ++ + V+ + G+M ++R +++ FR G +VL+TT+V ARGIDV+QVS+VIN
Sbjct: 265 WLAAELSKEGHQVALLSGEMMVEQRAAVIERFREGKEKVLVTTNVCARGIDVEQVSVVIN 324
Query: 144 YDLPNNR------ELYIHRIGRSGRFGRKGVAISFVKSD-DIRILRDIEQYYSTQIDEM 195
+DLP ++ E Y+HRIGR+GRFG++G+A++ V S + IL I+++++ +I+ +
Sbjct: 325 FDLPVDKDGNPDNETYLHRIGRTGRFGKRGLAVNMVDSKHSMNILNRIQEHFNKKIERL 383
Score = 97 (39.2 bits), Expect = 1.5e-29, Sum P(2) = 1.5e-29
Identities = 26/69 (37%), Positives = 39/69 (56%)
Query: 20 KLDYGQ----HVVSGTPGRVFDMIRR-RVLRTRNIKMLVLDEADEML-NKGFKEQIYDVY 73
KL+ GQ +V GTPG V D + + + + IK+ VLDEAD M+ +G ++Q +
Sbjct: 119 KLERGQKISEQIVIGTPGTVLDWCSKLKFIDPKKIKVFVLDEADVMIATQGHQDQSIRIQ 178
Query: 74 RYLPPATQV 82
R LP Q+
Sbjct: 179 RMLPRNCQM 187
>UNIPROTKB|Q9UHL0 [details] [associations]
symbol:DDX25 "ATP-dependent RNA helicase DDX25"
species:9606 "Homo sapiens" [GO:0003723 "RNA binding" evidence=IEA]
[GO:0007275 "multicellular organismal development" evidence=IEA]
[GO:0007286 "spermatid development" evidence=ISS] [GO:0005524 "ATP
binding" evidence=ISS] [GO:0005634 "nucleus" evidence=ISS]
[GO:0005737 "cytoplasm" evidence=ISS] [GO:0006406 "mRNA export from
nucleus" evidence=ISS] [GO:0006417 "regulation of translation"
evidence=ISS] [GO:0033391 "chromatoid body" evidence=ISS]
[GO:0004004 "ATP-dependent RNA helicase activity" evidence=ISS]
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0007275
GO:GO:0005524 GO:GO:0005634 GO:GO:0006417 EMBL:CH471065
GO:GO:0007286 GO:GO:0003723 GO:GO:0006406 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0033391 GO:GO:0004004
eggNOG:COG0513 HOGENOM:HOG000268797 InterPro:IPR014014
PROSITE:PS51195 HOVERGEN:HBG107989 CTD:29118 OrthoDB:EOG4NS3BD
EMBL:AF155140 EMBL:AY735312 EMBL:AY735301 EMBL:AY735302
EMBL:AY735303 EMBL:AY735304 EMBL:AY735305 EMBL:AY735306
EMBL:AY735307 EMBL:AY735308 EMBL:AY735309 EMBL:AY735310
EMBL:AY735311 EMBL:AK312772 EMBL:BC035388 EMBL:BC050360
IPI:IPI00296139 IPI:IPI00759454 RefSeq:NP_037396.3
UniGene:Hs.420263 PDB:2RB4 PDBsum:2RB4 ProteinModelPortal:Q9UHL0
SMR:Q9UHL0 STRING:Q9UHL0 PhosphoSite:Q9UHL0 DMDM:61222937
PaxDb:Q9UHL0 PRIDE:Q9UHL0 Ensembl:ENST00000263576 GeneID:29118
KEGG:hsa:29118 UCSC:uc001qcz.4 GeneCards:GC11P125773
HGNC:HGNC:18698 HPA:HPA020090 HPA:HPA020137 MIM:607663
neXtProt:NX_Q9UHL0 PharmGKB:PA38644 InParanoid:Q9UHL0 OMA:WHFAERI
PhylomeDB:Q9UHL0 ChiTaRS:DDX25 EvolutionaryTrace:Q9UHL0
GenomeRNAi:29118 NextBio:52207 ArrayExpress:Q9UHL0 Bgee:Q9UHL0
CleanEx:HS_DDX25 Genevestigator:Q9UHL0 GermOnline:ENSG00000109832
Uniprot:Q9UHL0
Length = 483
Score = 256 (95.2 bits), Expect = 1.6e-29, Sum P(2) = 1.6e-29
Identities = 49/118 (41%), Positives = 82/118 (69%)
Query: 84 WLTEKMREANFTVSSMHGDMPQKERDGIMKEFRSGTSRVLITTDVWARGIDVQQVSLVIN 143
WLT +M + VS + G++ ++R I++ FR G +VLITT+V ARGIDV+QV++V+N
Sbjct: 353 WLTVEMIQDGHQVSLLSGELTVEQRASIIQRFRDGKEKVLITTNVCARGIDVKQVTIVVN 412
Query: 144 YDLPNNR------ELYIHRIGRSGRFGRKGVAISFVKSDDIRILRDIEQYYSTQIDEM 195
+DLP + E Y+HRIGR+GRFG+KG+A + ++ D++ L I+ ++++ I ++
Sbjct: 413 FDLPVKQGEEPDYETYLHRIGRTGRFGKKGLAFNMIEVDELPSLMKIQDHFNSSIKQL 470
Score = 98 (39.6 bits), Expect = 1.6e-29, Sum P(2) = 1.6e-29
Identities = 26/84 (30%), Positives = 44/84 (52%)
Query: 1 MNVQCHACIGGTNLSEDLRKLDYGQHVVSGTPGRVFDM-IRRRVLRTRNIKMLVLDEADE 59
++VQ I G + R D + ++ GTPG V D + +++ I++ VLDEAD
Sbjct: 195 VDVQVMYAIRGNRIP---RGTDITKQIIIGTPGTVLDWCFKLKLIDLTKIRVFVLDEADV 251
Query: 60 MLN-KGFKEQIYDVYRYLPPATQV 82
M++ +GF + + R LP Q+
Sbjct: 252 MIDTQGFSDHSIRIQRALPSECQM 275
>FB|FBgn0030631 [details] [associations]
symbol:CG6227 species:7227 "Drosophila melanogaster"
[GO:0003729 "mRNA binding" evidence=ISS] [GO:0004004 "ATP-dependent
RNA helicase activity" evidence=ISS] [GO:0003724 "RNA helicase
activity" evidence=ISS] [GO:0005681 "spliceosomal complex"
evidence=ISS] [GO:0000398 "mRNA splicing, via spliceosome"
evidence=ISS] [GO:0005524 "ATP binding" evidence=IEA] [GO:0000381
"regulation of alternative mRNA splicing, via spliceosome"
evidence=IMP] [GO:0005634 "nucleus" evidence=IC] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
EMBL:AE014298 GO:GO:0005681 GO:GO:0003676 GO:GO:0000398
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0004004
GO:GO:0000381 InterPro:IPR014014 PROSITE:PS51195 GO:GO:0016779
HSSP:Q58083 GeneTree:ENSGT00610000086076 KO:K12811 OMA:RGRYKVL
EMBL:FJ764847 EMBL:FJ764848 EMBL:FJ764851 EMBL:FJ764853
EMBL:FJ764855 EMBL:FJ764858 FlyBase:FBgn0030631 EMBL:BT016090
RefSeq:NP_573020.2 UniGene:Dm.168 SMR:Q9VXW2 IntAct:Q9VXW2
EnsemblMetazoa:FBtr0074011 GeneID:32464 KEGG:dme:Dmel_CG6227
UCSC:CG6227-RA InParanoid:Q9VXW2 GenomeRNAi:32464 NextBio:778600
Uniprot:Q9VXW2
Length = 1224
Score = 236 (88.1 bits), Expect = 1.8e-29, Sum P(2) = 1.8e-29
Identities = 46/121 (38%), Positives = 74/121 (61%)
Query: 64 GFKEQIYDVYRYLPPATQVDWLTEKMREANFTVSSMHGDMPQKERDGIMKEFRSGTSRVL 123
G ++ + ++ D L + +A++ S+HG + Q +RD + +F+SG R+L
Sbjct: 752 GIYQEAGSIIVFVDKQENADILLRDLMKASYPCMSLHGGIDQFDRDSTIIDFKSGKVRLL 811
Query: 124 ITTDVWARGIDVQQVSLVINYDLPNNRELYIHRIGRSGRFGRKGVAISFVKSDDIRILRD 183
I T V ARG+DV+ + LV+NYD+PN+ E Y+HR GR+GR G+KG A +F+ + R D
Sbjct: 812 IATSVAARGLDVKDLILVVNYDVPNHYEDYVHRCGRTGRAGKKGSAYTFITPEQSRYAGD 871
Query: 184 I 184
I
Sbjct: 872 I 872
Score = 133 (51.9 bits), Expect = 1.8e-29, Sum P(2) = 1.8e-29
Identities = 29/78 (37%), Positives = 44/78 (56%)
Query: 8 CI-GGTNLSEDLRKLDYGQHVVSGTPGRVFDMIRR---RVLRTRNIKMLVLDEADEMLNK 63
C+ GGT +SE + +L G ++ TPGR+ DM+ RV R + +VLDEAD M +
Sbjct: 616 CVYGGTGISEQIAELKRGAEIIVCTPGRMIDMLAANSGRVTNLRRVTYVVLDEADRMFDM 675
Query: 64 GFKEQIYDVYRYLPPATQ 81
GF+ Q+ + + P Q
Sbjct: 676 GFEPQVMRIIDNVRPDRQ 693
>RGD|2314437 [details] [associations]
symbol:Ddx3y "DEAD (Asp-Glu-Ala-Asp) box polypeptide 3 Y-linked"
species:10116 "Rattus norvegicus" [GO:0005737 "cytoplasm"
evidence=ISO] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 RGD:2314437 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195 KO:K11594 CTD:8653
EMBL:FJ775727 IPI:IPI00196210 RefSeq:NP_001161137.1
UniGene:Rn.95841 ProteinModelPortal:C9WPN2 PRIDE:C9WPN2
GeneID:100312982 KEGG:rno:100312982 UCSC:RGD:2314437 Uniprot:C9WPN2
Length = 652
Score = 229 (85.7 bits), Expect = 1.8e-29, Sum P(2) = 1.8e-29
Identities = 45/114 (39%), Positives = 69/114 (60%)
Query: 83 DWLTEKMREANFTVSSMHGDMPQKERDGIMKEFRSGTSRVLITTDVWARGIDVQQVSLVI 142
D L + + + +S+HGD QK+R+ + +FRSG +L+ T V ARG+D+ V VI
Sbjct: 448 DSLENFLFQERYACTSIHGDRSQKDREEALHQFRSGRKPILVATAVAARGLDISNVKHVI 507
Query: 143 NYDLPNNRELYIHRIGRSGRFGRKGVAISFVKSDDIRILRDIEQYYSTQIDEMP 196
N+DLP++ E Y+HRIGR+GR G G+A SF ++ I +D+ E+P
Sbjct: 508 NFDLPSDIEEYVHRIGRTGRVGNLGLATSFFNERNLNITKDLLDLLVEAKQEVP 561
Score = 132 (51.5 bits), Expect = 1.8e-29, Sum P(2) = 1.8e-29
Identities = 30/75 (40%), Positives = 44/75 (58%)
Query: 8 CI--GGTNLSEDLRKLDYGQHVVSGTPGRVFDMIRRRVLRTRNIKMLVLDEADEMLNKGF 65
C+ GG + + +R L+ G H++ TPGR+ DM+ R + K LVLDEAD ML+ GF
Sbjct: 291 CVVYGGADTVQQIRDLERGCHLLVATPGRLVDMMERGKIGLDFCKYLVLDEADRMLDMGF 350
Query: 66 KEQIYDVYRY--LPP 78
+ QI + +PP
Sbjct: 351 EPQIRRIVEQDTMPP 365
>FB|FBgn0037549 [details] [associations]
symbol:CG7878 species:7227 "Drosophila melanogaster"
[GO:0004004 "ATP-dependent RNA helicase activity" evidence=ISS]
[GO:0004386 "helicase activity" evidence=ISS] [GO:0003723 "RNA
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR004087
InterPro:IPR004088 InterPro:IPR011545 Pfam:PF00013 Pfam:PF00270
Pfam:PF00271 PROSITE:PS00039 PROSITE:PS50084 PROSITE:PS51194
SMART:SM00322 SMART:SM00490 EMBL:AE014297 GO:GO:0005524
GO:GO:0006200 GO:GO:0003723 GO:GO:0004386 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513
InterPro:IPR014014 PROSITE:PS51195 GeneTree:ENSGT00660000095174
HSSP:P10081 OMA:VLDITHV EMBL:AY051831 RefSeq:NP_649767.1
UniGene:Dm.1098 SMR:Q7K4L8 IntAct:Q7K4L8 EnsemblMetazoa:FBtr0113205
GeneID:40959 KEGG:dme:Dmel_CG7878 UCSC:CG7878-RA
FlyBase:FBgn0037549 InParanoid:Q7K4L8 OrthoDB:EOG47D7XG
GenomeRNAi:40959 NextBio:20818674 Uniprot:Q7K4L8
Length = 703
Score = 231 (86.4 bits), Expect = 3.0e-29, Sum P(2) = 3.0e-29
Identities = 44/130 (33%), Positives = 78/130 (60%)
Query: 81 QVDWLTEKMREANFTVSSMHGDMPQKERDGIMKEFRSGTSRVLITTDVWARGIDVQQVSL 140
+ D L+ ++ F +HG+ Q +R+ + + +SG R+L+ TDV +RG+D++ ++
Sbjct: 541 RADDLSSELTLDGFMTQCIHGNRDQMDREQAIADIKSGVVRILVATDVASRGLDIEDITH 600
Query: 141 VINYDLPNNRELYIHRIGRSGRFGRKGVAISFVKSDDIRILRDIEQYYSTQIDEMPMNGK 200
VINYD P+N E Y+HR+GR+GR GR+G +ISF +D + +++ + E+P
Sbjct: 601 VINYDFPHNIEEYVHRVGRTGRAGRQGTSISFFTREDWAMAKELIEILQEAEQEVP---- 656
Query: 201 RSLHSYPARY 210
LH+ R+
Sbjct: 657 DELHNMARRF 666
Score = 129 (50.5 bits), Expect = 3.0e-29, Sum P(2) = 3.0e-29
Identities = 30/75 (40%), Positives = 42/75 (56%)
Query: 8 CI-GGTNLSEDLRKLDYGQHVVSGTPGRVFDMIRRRVLRTRNIKMLVLDEADEMLNKGFK 66
C+ GG N + + L+ G ++ TPGR+ D+I V+ I LVLDEAD ML+ GF+
Sbjct: 389 CVYGGGNRNMQISDLERGAEIIICTPGRLNDLIMANVIDVSTITYLVLDEADRMLDMGFE 448
Query: 67 EQIYDVYRYLPPATQ 81
QI V + P Q
Sbjct: 449 PQIRKVMLDIRPDRQ 463
>UNIPROTKB|Q5ZMC1 [details] [associations]
symbol:DDX19B "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 KO:K01529 GO:GO:0008026
HOGENOM:HOG000268797 InterPro:IPR014014 PROSITE:PS51195 OMA:PQAICLA
GeneTree:ENSGT00530000063236 HOVERGEN:HBG107989 CTD:11269
EMBL:AADN02040672 UniGene:Gga.7753 EMBL:AJ719463 IPI:IPI00571485
RefSeq:NP_001006568.1 SMR:Q5ZMC1 Ensembl:ENSGALT00000039619
GeneID:426504 KEGG:gga:426504 InParanoid:Q5ZMC1 NextBio:20828056
Uniprot:Q5ZMC1
Length = 479
Score = 254 (94.5 bits), Expect = 3.2e-29, Sum P(2) = 3.2e-29
Identities = 50/119 (42%), Positives = 84/119 (70%)
Query: 84 WLTEKMREANFTVSSMHGDMPQKERDGIMKEFRSGTSRVLITTDVWARGIDVQQVSLVIN 143
WL ++ + V+ + G+M ++R +++ FR G +VL+TT+V ARGIDV+QVS+VIN
Sbjct: 348 WLAAELSKEGHQVALLSGEMMVEQRAAVIERFREGKEKVLVTTNVCARGIDVEQVSVVIN 407
Query: 144 YDLPNNR------ELYIHRIGRSGRFGRKGVAISFVKSD-DIRILRDIEQYYSTQIDEM 195
+DLP ++ E Y+HRIGR+GRFG++G+AI+ V S + IL I++++S +I+++
Sbjct: 408 FDLPVDKDGNPDNETYLHRIGRTGRFGKRGLAINMVDSKHSMNILNRIQEHFSKKINKL 466
Score = 97 (39.2 bits), Expect = 3.2e-29, Sum P(2) = 3.2e-29
Identities = 26/69 (37%), Positives = 39/69 (56%)
Query: 20 KLDYGQ----HVVSGTPGRVFDMIRR-RVLRTRNIKMLVLDEADEML-NKGFKEQIYDVY 73
KL+ GQ +V GTPG V D + + + + IK+ VLDEAD M+ +G ++Q +
Sbjct: 202 KLERGQKISEQIVIGTPGTVLDWCSKLKFIDPKKIKVFVLDEADVMIATQGHQDQSIRIQ 261
Query: 74 RYLPPATQV 82
R LP Q+
Sbjct: 262 RMLPRDCQM 270
>TIGR_CMR|CPS_4097 [details] [associations]
symbol:CPS_4097 "ATP-dependent RNA helicase SrmB"
species:167879 "Colwellia psychrerythraea 34H" [GO:0004004
"ATP-dependent RNA helicase activity" evidence=ISS] [GO:0008186
"RNA-dependent ATPase activity" evidence=ISS] [GO:0042254 "ribosome
biogenesis" evidence=ISS] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0003676
EMBL:CP000083 GenomeReviews:CP000083_GR InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513
InterPro:IPR014014 PROSITE:PS51195 HOGENOM:HOG000268807 KO:K05590
ProtClustDB:PRK11192 RefSeq:YP_270752.2 ProteinModelPortal:Q47WS0
STRING:Q47WS0 PRIDE:Q47WS0 GeneID:3520098 KEGG:cps:CPS_4097
PATRIC:21471063 OMA:YLDKGHF BioCyc:CPSY167879:GI48-4110-MONOMER
Uniprot:Q47WS0
Length = 430
Score = 242 (90.2 bits), Expect = 3.7e-29, Sum P(2) = 3.7e-29
Identities = 45/106 (42%), Positives = 71/106 (66%)
Query: 82 VDWLTEKMREANFTVSSMHGDMPQKERDGIMKEFRSGTSRVLITTDVWARGIDVQQVSLV 141
V +L+ K+ + G MPQ +R+ ++ F+ G +VL+ TDV ARG+D+ +S V
Sbjct: 270 VQYLSGKLYAEELPCVWLEGKMPQDKRNKAIERFKKGEVKVLVATDVAARGLDIDDISHV 329
Query: 142 INYDLPNNRELYIHRIGRSGRFGRKGVAISFVKSDDIRILRDIEQY 187
IN+D+P ++YIHRIGR+GR G+KG AIS V++ D+ ++ IE+Y
Sbjct: 330 INFDMPRKVDIYIHRIGRTGRAGKKGTAISLVEAHDMGVIGKIERY 375
Score = 106 (42.4 bits), Expect = 3.7e-29, Sum P(2) = 3.7e-29
Identities = 24/60 (40%), Positives = 31/60 (51%)
Query: 10 GGTNLSEDLRKLDYGQHVVSGTPGRVFDMIRRRVLRTRNIKMLVLDEADEMLNKGFKEQI 69
GG N L ++ TPGR+ + I R I++LVLDEAD ML+ GF E I
Sbjct: 121 GGVNYGSHADILTSTTDILVATPGRLLEYIENEQFDAREIEILVLDEADRMLDLGFSETI 180
>UNIPROTKB|Q90ZF6 [details] [associations]
symbol:olvas "VASA" species:8090 "Oryzias latipes"
[GO:0043186 "P granule" evidence=IDA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
GO:GO:0043186 HSSP:Q58083 HOVERGEN:HBG015893 EMBL:AB063484
RefSeq:NP_001098146.1 UniGene:Ola.181 ProteinModelPortal:Q90ZF6
SMR:Q90ZF6 GeneID:100049226 CTD:100049226 Uniprot:Q90ZF6
Length = 617
Score = 225 (84.3 bits), Expect = 4.0e-29, Sum P(2) = 4.0e-29
Identities = 45/117 (38%), Positives = 70/117 (59%)
Query: 81 QVDWLTEKMREANFTVSSMHGDMPQKERDGIMKEFRSGTSRVLITTDVWARGIDVQQVSL 140
Q D++ + + +S+HGD Q+ER+ + +FRSG VL+ T V +RG+D+ V
Sbjct: 445 QADFIAAFLCQEKVPTTSIHGDREQREREKALADFRSGKCPVLVATSVASRGLDIPDVQH 504
Query: 141 VINYDLPNNRELYIHRIGRSGRFGRKGVAISFVKSD-DIRILRDIEQYYSTQIDEMP 196
V+N+DLPN + Y+HRIGR+GR G G A+SF D D ++ R + + E+P
Sbjct: 505 VVNFDLPNTIDDYVHRIGRTGRCGNTGRAVSFYDPDVDSQLARSLVGILAKAQQEVP 561
Score = 132 (51.5 bits), Expect = 4.0e-29, Sum P(2) = 4.0e-29
Identities = 26/57 (45%), Positives = 38/57 (66%)
Query: 10 GGTNLSEDLRKLDYGQHVVSGTPGRVFDMIRRRVLRTRNIKMLVLDEADEMLNKGFK 66
GG N +R+++ G +V+ GTPGR+ DMI R + ++ LVLDEAD ML+ GF+
Sbjct: 294 GGVNTGYQMREIEKGCNVLCGTPGRLLDMIGRGKVGLSKVRHLVLDEADRMLDMGFE 350
>TAIR|locus:2037416 [details] [associations]
symbol:RCF1 "regulator of CBF gene expression 1"
species:3702 "Arabidopsis thaliana" [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=ISM] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA;ISS] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005524 GO:GO:0003723 EMBL:AC007369
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195 KO:K12811
HOGENOM:HOG000007229 EMBL:BT002030 IPI:IPI00537100 PIR:H86341
RefSeq:NP_173516.1 UniGene:At.41680 UniGene:At.48212
ProteinModelPortal:Q8H0U8 SMR:Q8H0U8 PaxDb:Q8H0U8 PRIDE:Q8H0U8
EnsemblPlants:AT1G20920.1 GeneID:838685 KEGG:ath:AT1G20920
KEGG:dosa:Os08t0154225-00 KEGG:dosa:Os08t0159900-01 GeneFarm:1021
TAIR:At1g20920 InParanoid:Q8H0U8 OMA:QIHSDIR PhylomeDB:Q8H0U8
ProtClustDB:CLSN2679447 Genevestigator:Q8H0U8 GermOnline:AT1G20920
Uniprot:Q8H0U8
Length = 1166
Score = 238 (88.8 bits), Expect = 4.1e-29, Sum P(2) = 4.1e-29
Identities = 43/115 (37%), Positives = 75/115 (65%)
Query: 83 DWLTEKMREANFTVSSMHGDMPQKERDGIMKEFRSGTSRVLITTDVWARGIDVQQVSLVI 142
D L M ++++ S+HG Q +R+ + +F++ +LI T V ARG+DV+++ LV+
Sbjct: 790 DALYRDMIKSSYPCLSLHGGKDQTDRESTISDFKNDVCNLLIATSVAARGLDVKELELVV 849
Query: 143 NYDLPNNRELYIHRIGRSGRFGRKGVAISFVKSDDIRILRDIEQYYSTQIDEMPM 197
N+D PN+ E Y+HR+GR+GR GRKG A++F+ DD + D+ + + ++ E P+
Sbjct: 850 NFDAPNHYEDYVHRVGRTGRAGRKGCAVTFISEDDAKYAPDLVK--ALELSEQPV 902
Score = 127 (49.8 bits), Expect = 4.1e-29, Sum P(2) = 4.1e-29
Identities = 25/84 (29%), Positives = 47/84 (55%)
Query: 1 MNVQCHACIGGTNLSEDLRKLDYGQHVVSGTPGRVFDMI---RRRVLRTRNIKMLVLDEA 57
+ ++C GG+ +++ + +L G +V TPGR+ D++ ++ R + LV+DEA
Sbjct: 629 LGIRCVPVYGGSGVAQQISELKRGTEIVVCTPGRMIDILCTSSGKITNLRRVTFLVMDEA 688
Query: 58 DEMLNKGFKEQIYDVYRYLPPATQ 81
D M + GF+ QI + + + P Q
Sbjct: 689 DRMFDMGFEPQITRIIQNIRPERQ 712
>RGD|1303136 [details] [associations]
symbol:Ddx19a "DEAD (Asp-Glu-Ala-Asp) box polypeptide 19A"
species:10116 "Rattus norvegicus" [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0006917 "induction of apoptosis" evidence=IMP] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0010043
"response to zinc ion" evidence=IEP] InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS51194
SMART:SM00490 RGD:1303136 RGD:1593382 GO:GO:0005524 GO:GO:0006917
GO:GO:0010043 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 HOGENOM:HOG000268797
InterPro:IPR014014 PROSITE:PS51195 GeneTree:ENSGT00530000063236
CTD:55308 HOVERGEN:HBG107989 OrthoDB:EOG46MBJK EMBL:BC079094
IPI:IPI00476885 RefSeq:NP_001005381.2 UniGene:Rn.228949 SMR:Q68FX3
Ensembl:ENSRNOT00000024793 GeneID:292022 KEGG:rno:292022
UCSC:RGD:1303136 NextBio:633623 Genevestigator:Q68FX3
Uniprot:Q68FX3
Length = 478
Score = 250 (93.1 bits), Expect = 4.4e-29, Sum P(2) = 4.4e-29
Identities = 48/119 (40%), Positives = 83/119 (69%)
Query: 84 WLTEKMREANFTVSSMHGDMPQKERDGIMKEFRSGTSRVLITTDVWARGIDVQQVSLVIN 143
WL ++ + V+ + G+M ++R +++ FR G +VL+TT+V ARGIDV+QVS+VIN
Sbjct: 347 WLAAELSKEGHQVALLSGEMMVEQRAAVIERFREGKEKVLVTTNVCARGIDVEQVSVVIN 406
Query: 144 YDLPNNR------ELYIHRIGRSGRFGRKGVAISFVKSD-DIRILRDIEQYYSTQIDEM 195
+DLP ++ E Y+HRIGR+GRFG++G+A++ V S + IL I+++++ +I+ +
Sbjct: 407 FDLPVDKDGNPDNETYLHRIGRTGRFGKRGLAVNMVDSKHSMNILNRIQEHFNKKIERL 465
Score = 100 (40.3 bits), Expect = 4.4e-29, Sum P(2) = 4.4e-29
Identities = 23/61 (37%), Positives = 36/61 (59%)
Query: 24 GQHVVSGTPGRVFDMIRR-RVLRTRNIKMLVLDEADEML-NKGFKEQIYDVYRYLPPATQ 81
G+ +V GTPG V D + + + + IK+ VLDEAD M+ +G ++Q + R LP Q
Sbjct: 209 GEQIVIGTPGTVLDWCSKLKFIDPKKIKVFVLDEADVMIATQGHQDQSIRIQRMLPRNCQ 268
Query: 82 V 82
+
Sbjct: 269 M 269
>RGD|1593382 [details] [associations]
symbol:Ddx19b "DEAD (Asp-Glu-Ala-As) box polypeptide 19B"
species:10116 "Rattus norvegicus" [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS51194 SMART:SM00490 RGD:1303136 RGD:1593382 GO:GO:0005524
GO:GO:0006917 GO:GO:0010043 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 HOGENOM:HOG000268797
InterPro:IPR014014 PROSITE:PS51195 GeneTree:ENSGT00530000063236
CTD:55308 HOVERGEN:HBG107989 OrthoDB:EOG46MBJK EMBL:BC079094
IPI:IPI00476885 RefSeq:NP_001005381.2 UniGene:Rn.228949 SMR:Q68FX3
Ensembl:ENSRNOT00000024793 GeneID:292022 KEGG:rno:292022
UCSC:RGD:1303136 NextBio:633623 Genevestigator:Q68FX3
Uniprot:Q68FX3
Length = 478
Score = 250 (93.1 bits), Expect = 4.4e-29, Sum P(2) = 4.4e-29
Identities = 48/119 (40%), Positives = 83/119 (69%)
Query: 84 WLTEKMREANFTVSSMHGDMPQKERDGIMKEFRSGTSRVLITTDVWARGIDVQQVSLVIN 143
WL ++ + V+ + G+M ++R +++ FR G +VL+TT+V ARGIDV+QVS+VIN
Sbjct: 347 WLAAELSKEGHQVALLSGEMMVEQRAAVIERFREGKEKVLVTTNVCARGIDVEQVSVVIN 406
Query: 144 YDLPNNR------ELYIHRIGRSGRFGRKGVAISFVKSD-DIRILRDIEQYYSTQIDEM 195
+DLP ++ E Y+HRIGR+GRFG++G+A++ V S + IL I+++++ +I+ +
Sbjct: 407 FDLPVDKDGNPDNETYLHRIGRTGRFGKRGLAVNMVDSKHSMNILNRIQEHFNKKIERL 465
Score = 100 (40.3 bits), Expect = 4.4e-29, Sum P(2) = 4.4e-29
Identities = 23/61 (37%), Positives = 36/61 (59%)
Query: 24 GQHVVSGTPGRVFDMIRR-RVLRTRNIKMLVLDEADEML-NKGFKEQIYDVYRYLPPATQ 81
G+ +V GTPG V D + + + + IK+ VLDEAD M+ +G ++Q + R LP Q
Sbjct: 209 GEQIVIGTPGTVLDWCSKLKFIDPKKIKVFVLDEADVMIATQGHQDQSIRIQRMLPRNCQ 268
Query: 82 V 82
+
Sbjct: 269 M 269
>UNIPROTKB|E9PTL9 [details] [associations]
symbol:Ddx19b "Protein Ddx19b" species:10116 "Rattus
norvegicus" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS51194
SMART:SM00490 RGD:1593382 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 IPI:IPI00959699
Ensembl:ENSRNOT00000059034 ArrayExpress:E9PTL9 Uniprot:E9PTL9
Length = 482
Score = 250 (93.1 bits), Expect = 4.6e-29, Sum P(2) = 4.6e-29
Identities = 48/119 (40%), Positives = 83/119 (69%)
Query: 84 WLTEKMREANFTVSSMHGDMPQKERDGIMKEFRSGTSRVLITTDVWARGIDVQQVSLVIN 143
WL ++ + V+ + G+M ++R +++ FR G +VL+TT+V ARGIDV+QVS+VIN
Sbjct: 351 WLAAELSKEGHQVALLSGEMMVEQRAAVIERFREGKEKVLVTTNVCARGIDVEQVSVVIN 410
Query: 144 YDLPNNR------ELYIHRIGRSGRFGRKGVAISFVKSD-DIRILRDIEQYYSTQIDEM 195
+DLP ++ E Y+HRIGR+GRFG++G+A++ V S + IL I+++++ +I+ +
Sbjct: 411 FDLPVDKDGNPDNETYLHRIGRTGRFGKRGLAVNMVDSKHSMNILNRIQEHFNKKIERL 469
Score = 100 (40.3 bits), Expect = 4.6e-29, Sum P(2) = 4.6e-29
Identities = 23/61 (37%), Positives = 36/61 (59%)
Query: 24 GQHVVSGTPGRVFDMIRR-RVLRTRNIKMLVLDEADEML-NKGFKEQIYDVYRYLPPATQ 81
G+ +V GTPG V D + + + + IK+ VLDEAD M+ +G ++Q + R LP Q
Sbjct: 213 GEQIVIGTPGTVLDWCSKLKFIDPKKIKVFVLDEADVMIATQGHQDQSIRIQRMLPRNCQ 272
Query: 82 V 82
+
Sbjct: 273 M 273
>UNIPROTKB|Q9KV52 [details] [associations]
symbol:rhlB "ATP-dependent RNA helicase RhlB"
species:243277 "Vibrio cholerae O1 biovar El Tor str. N16961"
[GO:0004004 "ATP-dependent RNA helicase activity" evidence=ISS]
[GO:0006401 "RNA catabolic process" evidence=ISS] HAMAP:MF_00661
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
InterPro:IPR023554 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 EMBL:AE003852
GenomeReviews:AE003852_GR GO:GO:0003723 GO:GO:0006401
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0004004
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195 OMA:EEEWPEK
KO:K03732 ProtClustDB:PRK04837 PIR:C82340 RefSeq:NP_229960.1
ProteinModelPortal:Q9KV52 DNASU:2614975 GeneID:2614975
KEGG:vch:VC0305 PATRIC:20079655 Uniprot:Q9KV52
Length = 438
Score = 217 (81.4 bits), Expect = 4.6e-29, Sum P(2) = 4.6e-29
Identities = 48/116 (41%), Positives = 67/116 (57%)
Query: 93 NFTVSSMHGDMPQKERDGIMKEFRSGTSRVLITTDVWARGIDVQQVSLVINYDLPNNREL 152
N V + GD+PQK+R+ I+++F G +L+ TDV ARG+ + QV+ V NYDLP++ E
Sbjct: 280 NHRVGLLTGDVPQKKRERILEQFTQGDVDILVATDVAARGLHIPQVTHVFNYDLPDDCED 339
Query: 153 YIHRIGRSGRFGRKGVAISFVKSDDIRILRDIEQYYSTQIDEMPMNGKRSLHSYPA 208
Y+HRIGR+GR G G +ISF + L IE Y I + L PA
Sbjct: 340 YVHRIGRTGRAGASGHSISFACEEYAINLPAIESYIEHAIPTSDYDPSALLTDLPA 395
Score = 133 (51.9 bits), Expect = 4.6e-29, Sum P(2) = 4.6e-29
Identities = 28/77 (36%), Positives = 46/77 (59%)
Query: 10 GGTNLSEDLRKLDYGQHVVSGTPGRVFDMIRRRVLRTRNIKMLVLDEADEMLNKGFKEQI 69
GG + + L KL G ++ GT GR+ D ++RV +I+ +VLDEAD M + GF + I
Sbjct: 120 GGESYDKQLAKLQSGVDILIGTTGRIIDFYKQRVFNLNHIQAVVLDEADRMFDLGFIKDI 179
Query: 70 YDVYRYLP-PATQVDWL 85
++R +P P +++ L
Sbjct: 180 RFLFRRMPEPKDRLNML 196
>TIGR_CMR|VC_0305 [details] [associations]
symbol:VC_0305 "ATP-dependent RNA helicase RhlB"
species:686 "Vibrio cholerae O1 biovar El Tor" [GO:0004004
"ATP-dependent RNA helicase activity" evidence=ISS] [GO:0006401
"RNA catabolic process" evidence=ISS] HAMAP:MF_00661
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
InterPro:IPR023554 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 EMBL:AE003852
GenomeReviews:AE003852_GR GO:GO:0003723 GO:GO:0006401
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0004004
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195 OMA:EEEWPEK
KO:K03732 ProtClustDB:PRK04837 PIR:C82340 RefSeq:NP_229960.1
ProteinModelPortal:Q9KV52 DNASU:2614975 GeneID:2614975
KEGG:vch:VC0305 PATRIC:20079655 Uniprot:Q9KV52
Length = 438
Score = 217 (81.4 bits), Expect = 4.6e-29, Sum P(2) = 4.6e-29
Identities = 48/116 (41%), Positives = 67/116 (57%)
Query: 93 NFTVSSMHGDMPQKERDGIMKEFRSGTSRVLITTDVWARGIDVQQVSLVINYDLPNNREL 152
N V + GD+PQK+R+ I+++F G +L+ TDV ARG+ + QV+ V NYDLP++ E
Sbjct: 280 NHRVGLLTGDVPQKKRERILEQFTQGDVDILVATDVAARGLHIPQVTHVFNYDLPDDCED 339
Query: 153 YIHRIGRSGRFGRKGVAISFVKSDDIRILRDIEQYYSTQIDEMPMNGKRSLHSYPA 208
Y+HRIGR+GR G G +ISF + L IE Y I + L PA
Sbjct: 340 YVHRIGRTGRAGASGHSISFACEEYAINLPAIESYIEHAIPTSDYDPSALLTDLPA 395
Score = 133 (51.9 bits), Expect = 4.6e-29, Sum P(2) = 4.6e-29
Identities = 28/77 (36%), Positives = 46/77 (59%)
Query: 10 GGTNLSEDLRKLDYGQHVVSGTPGRVFDMIRRRVLRTRNIKMLVLDEADEMLNKGFKEQI 69
GG + + L KL G ++ GT GR+ D ++RV +I+ +VLDEAD M + GF + I
Sbjct: 120 GGESYDKQLAKLQSGVDILIGTTGRIIDFYKQRVFNLNHIQAVVLDEADRMFDLGFIKDI 179
Query: 70 YDVYRYLP-PATQVDWL 85
++R +P P +++ L
Sbjct: 180 RFLFRRMPEPKDRLNML 196
>UNIPROTKB|J3QL17 [details] [associations]
symbol:DDX25 "ATP-dependent RNA helicase DDX25"
species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
EMBL:AP000842 InterPro:IPR014014 PROSITE:PS51195 HGNC:HGNC:18698
ChiTaRS:DDX25 Ensembl:ENST00000530414 Uniprot:J3QL17
Length = 468
Score = 251 (93.4 bits), Expect = 4.6e-29, Sum P(2) = 4.6e-29
Identities = 49/112 (43%), Positives = 78/112 (69%)
Query: 84 WLTEKMREANFTVSSMHGDMPQKERDGIMKEFRSGTSRVLITTDVWARGIDVQQVSLVIN 143
WLT +M + VS + G++ ++R I++ FR G +VLITT+V ARGIDV+QV++V+N
Sbjct: 356 WLTVEMIQDGHQVSLLSGELTVEQRASIIQRFRDGKEKVLITTNVCARGIDVKQVTIVVN 415
Query: 144 YDLPNNR------ELYIHRIGRSGRFGRKGVAISFVKSDDIRILRDIEQYYS 189
+DLP + E Y+HRIGR+GRFG+KG+A + ++ D++ L I+ ++S
Sbjct: 416 FDLPVKQGEEPDYETYLHRIGRTGRFGKKGLAFNMIEVDELPSLMKIQDHFS 467
Score = 98 (39.6 bits), Expect = 4.6e-29, Sum P(2) = 4.6e-29
Identities = 26/84 (30%), Positives = 44/84 (52%)
Query: 1 MNVQCHACIGGTNLSEDLRKLDYGQHVVSGTPGRVFDM-IRRRVLRTRNIKMLVLDEADE 59
++VQ I G + R D + ++ GTPG V D + +++ I++ VLDEAD
Sbjct: 198 VDVQVMYAIRGNRIP---RGTDITKQIIIGTPGTVLDWCFKLKLIDLTKIRVFVLDEADV 254
Query: 60 MLN-KGFKEQIYDVYRYLPPATQV 82
M++ +GF + + R LP Q+
Sbjct: 255 MIDTQGFSDHSIRIQRALPSECQM 278
>ZFIN|ZDB-GENE-080721-12 [details] [associations]
symbol:zgc:193690 "zgc:193690" species:7955 "Danio
rerio" [GO:0004386 "helicase activity" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0005575 "cellular_component" evidence=ND]
[GO:0016787 "hydrolase activity" evidence=IEA] InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS51194
SMART:SM00490 ZFIN:ZDB-GENE-080721-12 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 GeneTree:ENSGT00530000063236
EMBL:CR846089 IPI:IPI00928637 ProteinModelPortal:F1Q5T4
Ensembl:ENSDART00000134461 ArrayExpress:F1Q5T4 Bgee:F1Q5T4
Uniprot:F1Q5T4
Length = 492
Score = 249 (92.7 bits), Expect = 5.3e-29, Sum P(2) = 5.3e-29
Identities = 50/117 (42%), Positives = 81/117 (69%)
Query: 83 DWLTEKMREANFTVSSMHGDMPQKERDGIMKEFRSGTSRVLITTDVWARGIDVQQVSLVI 142
+WL +M + V+ + G+M ++R +++ FR G +VLITT+V ARGIDV+QVS+VI
Sbjct: 339 NWLAGQMSKEGHQVALLSGEMVVEQRAAVIERFRDGKEKVLITTNVCARGIDVEQVSVVI 398
Query: 143 NYDLPNNR------ELYIHRIGRSGRFGRKGVAISFVKSD-DIRILRDIEQYYSTQI 192
N+DLP ++ E Y+HRIGR+GRFG++G+AI+ V S + IL+ E+++ ++
Sbjct: 399 NFDLPLDKDSNPDNETYLHRIGRTGRFGKRGLAINMVDSQRSMEILKTYERHFGKKL 455
Score = 101 (40.6 bits), Expect = 5.3e-29, Sum P(2) = 5.3e-29
Identities = 23/58 (39%), Positives = 36/58 (62%)
Query: 27 VVSGTPGRVFDM-IRRRVLRTRNIKMLVLDEADEML-NKGFKEQIYDVYRYLPPATQV 82
+V GTPG V D I+ +++ + IK+ VLDEAD M+ +G ++Q + R LP Q+
Sbjct: 205 IVIGTPGTVLDWCIKLKLIDPKKIKVFVLDEADVMIATQGHQDQSIRIQRMLPKGCQM 262
>UNIPROTKB|I3L0H8 [details] [associations]
symbol:DDX19A "ATP-dependent RNA helicase DDX19A"
species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
HGNC:HGNC:25628 EMBL:AC012184 ProteinModelPortal:I3L0H8 SMR:I3L0H8
PRIDE:I3L0H8 Ensembl:ENST00000417604 Bgee:I3L0H8 Uniprot:I3L0H8
Length = 447
Score = 250 (93.1 bits), Expect = 5.4e-29, Sum P(2) = 5.4e-29
Identities = 48/119 (40%), Positives = 83/119 (69%)
Query: 84 WLTEKMREANFTVSSMHGDMPQKERDGIMKEFRSGTSRVLITTDVWARGIDVQQVSLVIN 143
WL ++ + V+ + G+M ++R +++ FR G +VL+TT+V ARGIDV+QVS+VIN
Sbjct: 316 WLAAELSKEGHQVALLSGEMMVEQRAAVIERFREGKEKVLVTTNVCARGIDVEQVSVVIN 375
Query: 144 YDLPNNR------ELYIHRIGRSGRFGRKGVAISFVKSD-DIRILRDIEQYYSTQIDEM 195
+DLP ++ E Y+HRIGR+GRFG++G+A++ V S + IL I+++++ +I+ +
Sbjct: 376 FDLPVDKDGNPDNETYLHRIGRTGRFGKRGLAVNMVDSKHSMNILNRIQEHFNKKIERL 434
Score = 97 (39.2 bits), Expect = 5.4e-29, Sum P(2) = 5.4e-29
Identities = 26/69 (37%), Positives = 39/69 (56%)
Query: 20 KLDYGQ----HVVSGTPGRVFDMIRR-RVLRTRNIKMLVLDEADEML-NKGFKEQIYDVY 73
KL+ GQ +V GTPG V D + + + + IK+ VLDEAD M+ +G ++Q +
Sbjct: 170 KLERGQKISEQIVIGTPGTVLDWCSKLKFIDPKKIKVFVLDEADVMIATQGHQDQSIRIQ 229
Query: 74 RYLPPATQV 82
R LP Q+
Sbjct: 230 RMLPRNCQM 238
>RGD|1559513 [details] [associations]
symbol:RGD1559513 "similar to DEAD (Asp-Glu-Ala-Asp) box
polypeptide 41" species:10116 "Rattus norvegicus" [GO:0003676
"nucleic acid binding" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001650 InterPro:IPR001878 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS51194 SMART:SM00343
SMART:SM00490 RGD:1559513 GO:GO:0005524 GO:GO:0008270 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 OrthoDB:EOG4CVG6K OMA:MEETETI
IPI:IPI00958592 Ensembl:ENSRNOT00000033492 UCSC:RGD:1559513
NextBio:667517 Uniprot:D4ADJ9
Length = 621
Score = 200 (75.5 bits), Expect = 8.0e-29, Sum P(2) = 8.0e-29
Identities = 41/105 (39%), Positives = 63/105 (60%)
Query: 82 VDWLTEKMREANFTVSSMHGDMPQKERDGIMKEFRSGTSRVLITTDVWARGIDVQQVSLV 141
VD + E + ++HG Q+ER ++ FR G VL+ TDV ++G+D + V
Sbjct: 444 VDAIHEYLLLKGVEAVAIHGGKDQEERTKAIEAFREGKKDVLVATDVASKGLDFPAIQHV 503
Query: 142 INYDLPNNRELYIHRIGRSGRFGRKGVAISFV-KSDDIRILRDIE 185
INYD+P E Y+HRIGR+GR G G+A +F+ K+ D +L D++
Sbjct: 504 INYDMPEEIENYVHRIGRTGRSGNTGIATTFINKACDESVLMDLK 548
Score = 155 (59.6 bits), Expect = 8.0e-29, Sum P(2) = 8.0e-29
Identities = 30/99 (30%), Positives = 55/99 (55%)
Query: 3 VQCHACIGGTNLSEDLRKLDYGQHVVSGTPGRVFDMIRRRVLRTRNIKMLVLDEADEMLN 62
+ C CIGG +L E + + +G H++ TPGR+ D+++++++ + L LDEAD M++
Sbjct: 291 LHCALCIGGVSLKEQMETMRHGVHIMVATPGRLMDLLQKKMVSLDICRYLALDEADRMID 350
Query: 63 KGFKEQIYDVYRYLPPATQVDWLTEKMREA--NFTVSSM 99
GF+ I ++ Y Q + M + NF S++
Sbjct: 351 MGFEGDIRTIFSYFKGQRQTLLFSATMPKKIQNFAKSAL 389
>UNIPROTKB|Q9NUU7 [details] [associations]
symbol:DDX19A "ATP-dependent RNA helicase DDX19A"
species:9606 "Homo sapiens" [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0015031 "protein
transport" evidence=IEA] [GO:0051028 "mRNA transport" evidence=IEA]
[GO:0006917 "induction of apoptosis" evidence=IEA] [GO:0010043
"response to zinc ion" evidence=IEA] [GO:0005643 "nuclear pore"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0031965
"nuclear membrane" evidence=IEA] InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0005737 GO:GO:0015031
GO:GO:0031965 GO:GO:0005643 GO:GO:0003723 GO:GO:0051028
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 KO:K01529
GO:GO:0008026 eggNOG:COG0513 HOGENOM:HOG000268797
InterPro:IPR014014 PROSITE:PS51195 OMA:PQAICLA CTD:55308
HOVERGEN:HBG107989 OrthoDB:EOG46MBJK EMBL:AK001988 EMBL:AK223262
EMBL:AL832970 EMBL:CH471241 EMBL:BC005162 EMBL:BC006544
EMBL:BC137496 EMBL:BC137497 IPI:IPI00019918 RefSeq:NP_060802.1
UniGene:Hs.656037 ProteinModelPortal:Q9NUU7 SMR:Q9NUU7
IntAct:Q9NUU7 MINT:MINT-1450935 STRING:Q9NUU7 PhosphoSite:Q9NUU7
DMDM:73919226 PaxDb:Q9NUU7 PeptideAtlas:Q9NUU7 PRIDE:Q9NUU7
DNASU:55308 Ensembl:ENST00000302243 GeneID:55308 KEGG:hsa:55308
UCSC:uc002eyv.3 GeneCards:GC16P070380 H-InvDB:HIX0038837
HGNC:HGNC:25628 HPA:HPA045252 neXtProt:NX_Q9NUU7
PharmGKB:PA134894996 InParanoid:Q9NUU7 PhylomeDB:Q9NUU7
GenomeRNAi:55308 NextBio:59538 ArrayExpress:Q9NUU7 Bgee:Q9NUU7
CleanEx:HS_DDX19A Genevestigator:Q9NUU7 GermOnline:ENSG00000168872
Uniprot:Q9NUU7
Length = 478
Score = 250 (93.1 bits), Expect = 9.0e-29, Sum P(2) = 9.0e-29
Identities = 48/119 (40%), Positives = 83/119 (69%)
Query: 84 WLTEKMREANFTVSSMHGDMPQKERDGIMKEFRSGTSRVLITTDVWARGIDVQQVSLVIN 143
WL ++ + V+ + G+M ++R +++ FR G +VL+TT+V ARGIDV+QVS+VIN
Sbjct: 347 WLAAELSKEGHQVALLSGEMMVEQRAAVIERFREGKEKVLVTTNVCARGIDVEQVSVVIN 406
Query: 144 YDLPNNR------ELYIHRIGRSGRFGRKGVAISFVKSD-DIRILRDIEQYYSTQIDEM 195
+DLP ++ E Y+HRIGR+GRFG++G+A++ V S + IL I+++++ +I+ +
Sbjct: 407 FDLPVDKDGNPDNETYLHRIGRTGRFGKRGLAVNMVDSKHSMNILNRIQEHFNKKIERL 465
Score = 97 (39.2 bits), Expect = 9.0e-29, Sum P(2) = 9.0e-29
Identities = 26/69 (37%), Positives = 39/69 (56%)
Query: 20 KLDYGQ----HVVSGTPGRVFDMIRR-RVLRTRNIKMLVLDEADEML-NKGFKEQIYDVY 73
KL+ GQ +V GTPG V D + + + + IK+ VLDEAD M+ +G ++Q +
Sbjct: 201 KLERGQKISEQIVIGTPGTVLDWCSKLKFIDPKKIKVFVLDEADVMIATQGHQDQSIRIQ 260
Query: 74 RYLPPATQV 82
R LP Q+
Sbjct: 261 RMLPRNCQM 269
>MGI|MGI:99526 [details] [associations]
symbol:Ddx19a "DEAD (Asp-Glu-Ala-Asp) box polypeptide 19a"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0003723 "RNA binding" evidence=IEA] [GO:0004386 "helicase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0005643 "nuclear pore"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0006810
"transport" evidence=IEA] [GO:0006917 "induction of apoptosis"
evidence=ISO] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0015031 "protein transport" evidence=IEA]
[GO:0016020 "membrane" evidence=IEA] [GO:0016787 "hydrolase
activity" evidence=IEA] [GO:0051028 "mRNA transport" evidence=IEA]
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 MGI:MGI:99526
GO:GO:0005524 GO:GO:0005737 GO:GO:0015031 GO:GO:0031965
GO:GO:0005643 GO:GO:0003723 EMBL:CH466525 GO:GO:0051028
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
eggNOG:COG0513 HOGENOM:HOG000268797 InterPro:IPR014014
PROSITE:PS51195 OMA:PQAICLA GeneTree:ENSGT00530000063236 CTD:55308
HOVERGEN:HBG107989 OrthoDB:EOG46MBJK EMBL:L25125 EMBL:AK049467
EMBL:AK146548 EMBL:BC011270 IPI:IPI00123651 PIR:I49731
RefSeq:NP_031942.2 UniGene:Mm.287901 ProteinModelPortal:Q61655
SMR:Q61655 IntAct:Q61655 PhosphoSite:Q61655
REPRODUCTION-2DPAGE:Q61655 PaxDb:Q61655 PRIDE:Q61655
Ensembl:ENSMUST00000040416 GeneID:13680 KEGG:mmu:13680
InParanoid:Q543M2 ChiTaRS:DDX19A NextBio:284434 Bgee:Q61655
CleanEx:MM_DDX19A Genevestigator:Q61655
GermOnline:ENSMUSG00000015023 Uniprot:Q61655
Length = 478
Score = 250 (93.1 bits), Expect = 9.0e-29, Sum P(2) = 9.0e-29
Identities = 48/119 (40%), Positives = 83/119 (69%)
Query: 84 WLTEKMREANFTVSSMHGDMPQKERDGIMKEFRSGTSRVLITTDVWARGIDVQQVSLVIN 143
WL ++ + V+ + G+M ++R +++ FR G +VL+TT+V ARGIDV+QVS+VIN
Sbjct: 347 WLAAELSKEGHQVALLSGEMMVEQRAAVIERFREGKEKVLVTTNVCARGIDVEQVSVVIN 406
Query: 144 YDLPNNR------ELYIHRIGRSGRFGRKGVAISFVKSD-DIRILRDIEQYYSTQIDEM 195
+DLP ++ E Y+HRIGR+GRFG++G+A++ V S + IL I+++++ +I+ +
Sbjct: 407 FDLPVDKDGNPDNETYLHRIGRTGRFGKRGLAVNMVDSKHSMNILNRIQEHFNKKIERL 465
Score = 97 (39.2 bits), Expect = 9.0e-29, Sum P(2) = 9.0e-29
Identities = 27/69 (39%), Positives = 39/69 (56%)
Query: 20 KLDYGQHV----VSGTPGRVFDMIRR-RVLRTRNIKMLVLDEADEML-NKGFKEQIYDVY 73
KL+ GQ V V GTPG V D + + + + IK+ VLDEAD M+ +G ++Q +
Sbjct: 201 KLERGQKVSEQIVIGTPGTVLDWCSKLKFIDPKKIKVFVLDEADVMIATQGHQDQSIRIQ 260
Query: 74 RYLPPATQV 82
R LP Q+
Sbjct: 261 RMLPRNCQM 269
>UNIPROTKB|Q9UMR2 [details] [associations]
symbol:DDX19B "ATP-dependent RNA helicase DDX19B"
species:9606 "Homo sapiens" [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0015031 "protein
transport" evidence=IEA] [GO:0005643 "nuclear pore" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0031965 "nuclear
membrane" evidence=IEA] [GO:0004386 "helicase activity"
evidence=TAS] [GO:0006406 "mRNA export from nucleus" evidence=TAS]
[GO:0005635 "nuclear envelope" evidence=IDA] InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0005737 GO:GO:0015031
GO:GO:0031965 GO:GO:0005643 GO:GO:0003723 GO:GO:0004386
GO:GO:0006406 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 eggNOG:COG0513 HOGENOM:HOG000268797
InterPro:IPR014014 PROSITE:PS51195 HOVERGEN:HBG107989
OrthoDB:EOG46MBJK EMBL:CH471241 EMBL:AJ237946 EMBL:AF353720
EMBL:AL136639 EMBL:CR457215 EMBL:CR533509 EMBL:AK027378
EMBL:AK301938 EMBL:AK302107 EMBL:AK316346 EMBL:AC012184
EMBL:BC003626 EMBL:BC010008 IPI:IPI00008943 IPI:IPI00027599
IPI:IPI00556368 IPI:IPI00939593 RefSeq:NP_001014449.1
RefSeq:NP_001014451.1 RefSeq:NP_001244101.1 RefSeq:NP_001244102.1
RefSeq:NP_001244103.1 RefSeq:NP_009173.1 UniGene:Hs.221761 PDB:3EWS
PDB:3FHC PDB:3FHT PDB:3FMO PDB:3FMP PDB:3G0H PDBsum:3EWS
PDBsum:3FHC PDBsum:3FHT PDBsum:3FMO PDBsum:3FMP PDBsum:3G0H
ProteinModelPortal:Q9UMR2 SMR:Q9UMR2 DIP:DIP-48486N IntAct:Q9UMR2
MINT:MINT-1387516 STRING:Q9UMR2 PhosphoSite:Q9UMR2 DMDM:10719979
PaxDb:Q9UMR2 PRIDE:Q9UMR2 DNASU:11269 Ensembl:ENST00000288071
Ensembl:ENST00000355992 Ensembl:ENST00000393657
Ensembl:ENST00000451014 Ensembl:ENST00000563392
Ensembl:ENST00000568625 GeneID:11269 KEGG:hsa:11269 UCSC:uc002eyo.3
UCSC:uc002eyp.3 CTD:11269 GeneCards:GC16P070328 HGNC:HGNC:2742
HPA:CAB037284 MIM:605812 neXtProt:NX_Q9UMR2 PharmGKB:PA27208
InParanoid:Q9UMR2 OMA:HETIFEV PhylomeDB:Q9UMR2 ChiTaRS:DDX19B
EvolutionaryTrace:Q9UMR2 GenomeRNAi:11269 NextBio:42879
ArrayExpress:Q9UMR2 Bgee:Q9UMR2 CleanEx:HS_DDX19B
Genevestigator:Q9UMR2 GermOnline:ENSG00000157349 Uniprot:Q9UMR2
Length = 479
Score = 250 (93.1 bits), Expect = 9.1e-29, Sum P(2) = 9.1e-29
Identities = 48/119 (40%), Positives = 83/119 (69%)
Query: 84 WLTEKMREANFTVSSMHGDMPQKERDGIMKEFRSGTSRVLITTDVWARGIDVQQVSLVIN 143
WL ++ + V+ + G+M ++R +++ FR G +VL+TT+V ARGIDV+QVS+VIN
Sbjct: 348 WLAAELSKEGHQVALLSGEMMVEQRAAVIERFREGKEKVLVTTNVCARGIDVEQVSVVIN 407
Query: 144 YDLPNNR------ELYIHRIGRSGRFGRKGVAISFVKSD-DIRILRDIEQYYSTQIDEM 195
+DLP ++ E Y+HRIGR+GRFG++G+A++ V S + IL I+++++ +I+ +
Sbjct: 408 FDLPVDKDGNPDNETYLHRIGRTGRFGKRGLAVNMVDSKHSMNILNRIQEHFNKKIERL 466
Score = 97 (39.2 bits), Expect = 9.1e-29, Sum P(2) = 9.1e-29
Identities = 26/69 (37%), Positives = 39/69 (56%)
Query: 20 KLDYGQ----HVVSGTPGRVFDMIRR-RVLRTRNIKMLVLDEADEML-NKGFKEQIYDVY 73
KL+ GQ +V GTPG V D + + + + IK+ VLDEAD M+ +G ++Q +
Sbjct: 202 KLERGQKISEQIVIGTPGTVLDWCSKLKFIDPKKIKVFVLDEADVMIATQGHQDQSIRIQ 261
Query: 74 RYLPPATQV 82
R LP Q+
Sbjct: 262 RMLPRNCQM 270
>DICTYBASE|DDB_G0269932 [details] [associations]
symbol:uap56 "ATP-dependent RNA helicase"
species:44689 "Dictyostelium discoideum" [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0005681
"spliceosomal complex" evidence=ISS] [GO:0005634 "nucleus"
evidence=ISS] [GO:0004004 "ATP-dependent RNA helicase activity"
evidence=ISS] [GO:0003723 "RNA binding" evidence=ISS] [GO:0000398
"mRNA splicing, via spliceosome" evidence=ISS] [GO:0000348 "mRNA
branch site recognition" evidence=ISS] [GO:0016787 "hydrolase
activity" evidence=IEA] [GO:0044351 "macropinocytosis"
evidence=RCA] InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270
Pfam:PF00271 PROSITE:PS51194 SMART:SM00490 dictyBase:DDB_G0269932
GO:GO:0005524 EMBL:AAFI02000005 GenomeReviews:CM000150_GR
GO:GO:0005681 GO:GO:0003723 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0004004 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 KO:K12812 GO:GO:0000348 RefSeq:XP_646415.1
ProteinModelPortal:Q55CR6 SMR:Q55CR6 PRIDE:Q55CR6
EnsemblProtists:DDB0233387 GeneID:8617372 KEGG:ddi:DDB_G0269932
InParanoid:Q55CR6 OMA:GGANMNP ProtClustDB:CLSZ2429041
Uniprot:Q55CR6
Length = 428
Score = 243 (90.6 bits), Expect = 9.3e-29, Sum P(2) = 9.3e-29
Identities = 42/121 (34%), Positives = 80/121 (66%)
Query: 75 YLPPATQVDWLTEKMREANFTVSSMHGDMPQKERDGIMKEFRSGTSRVLITTDVWARGID 134
++ + D L + +++ F +H D+ QK+R ++F++ SR+++ T+++ RGID
Sbjct: 296 FVKSVRRADALNKILQDIGFPSICIHRDLDQKDRIEQYRKFKNFESRIMVATNIFGRGID 355
Query: 135 VQQVSLVINYDLPNNRELYIHRIGRSGRFGRKGVAISFVKSDDIRILRDIEQYYSTQIDE 194
+++V++VINYD+ + + Y+HR+GR+GRFG KG+AISFV S + +L ++ + I E
Sbjct: 356 IERVNVVINYDMAESADTYLHRVGRAGRFGTKGLAISFVPSKEDPVLEQVQSKFVVSIKE 415
Query: 195 M 195
+
Sbjct: 416 L 416
Score = 101 (40.6 bits), Expect = 9.3e-29, Sum P(2) = 9.3e-29
Identities = 24/84 (28%), Positives = 42/84 (50%)
Query: 2 NVQCHACIGGTNLS--EDLRKLDYGQHVVSGTPGRVFDMIRRRVLRTRNIKMLVLDEADE 59
NV+ GG + +DL K + +++ GTPGR+ + L + IK +LDE D
Sbjct: 145 NVKTAVIYGGIPVQTHKDLIK-EKKPNIIIGTPGRILQLASEGALSLKEIKQFILDECDT 203
Query: 60 MLNK-GFKEQIYDVYRYLPPATQV 82
ML ++ + +++ +P QV
Sbjct: 204 MLESLDMRKDVQKIFKLIPANKQV 227
>UNIPROTKB|C9JMU5 [details] [associations]
symbol:DDX17 "Probable ATP-dependent RNA helicase DDX17"
species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014
PROSITE:PS51195 HOGENOM:HOG000268804 EMBL:Z97056 IPI:IPI01022339
HGNC:HGNC:2740 ChiTaRS:DDX17 ProteinModelPortal:C9JMU5 SMR:C9JMU5
STRING:C9JMU5 PRIDE:C9JMU5 Ensembl:ENST00000381633
ArrayExpress:C9JMU5 Bgee:C9JMU5 Uniprot:C9JMU5
Length = 652
Score = 234 (87.4 bits), Expect = 9.4e-29, Sum P(2) = 9.4e-29
Identities = 47/104 (45%), Positives = 66/104 (63%)
Query: 83 DWLTEKMREANFTVSSMHGDMPQKERDGIMKEFRSGTSRVLITTDVWARGI--DVQQVSL 140
D LT +MR + +HGD Q ERD ++ EFRSG + +LI TDV +RG+ DV+ V
Sbjct: 353 DDLTRRMRRDGWPAMCIHGDKSQPERDWVLNEFRSGKAPILIATDVASRGLGFDVEDVKF 412
Query: 141 VINYDLPNNRELYIHRIGRSGRFGRKGVAISFVKSDDIRILRDI 184
VINYD PN+ E Y+HRIGR+ R KG A +F +++ R++
Sbjct: 413 VINYDYPNSSEDYVHRIGRTARSTNKGTAYTFFTPGNLKQAREL 456
Score = 120 (47.3 bits), Expect = 9.4e-29, Sum P(2) = 9.4e-29
Identities = 28/75 (37%), Positives = 37/75 (49%)
Query: 8 CI-GGTNLSEDLRKLDYGQHVVSGTPGRVFDMIRRRVLRTRNIKMLVLDEADEMLNKGFK 66
CI GG +R L+ G + TPGR+ D + R LVLDEAD ML+ GF+
Sbjct: 198 CIYGGAPKGPQIRDLERGVEICIATPGRLIDFLESGKTNLRRCTYLVLDEADRMLDMGFE 257
Query: 67 EQIYDVYRYLPPATQ 81
QI + + P Q
Sbjct: 258 PQIRKIVDQIRPDRQ 272
>UNIPROTKB|H3BQK0 [details] [associations]
symbol:DDX19B "HCG1998531, isoform CRA_g" species:9606
"Homo sapiens" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014
PROSITE:PS51195 EMBL:CH471241 EMBL:AC012184 HGNC:HGNC:2742
ChiTaRS:DDX19B SMR:H3BQK0 Ensembl:ENST00000563206 Uniprot:H3BQK0
Length = 484
Score = 250 (93.1 bits), Expect = 9.7e-29, Sum P(2) = 9.7e-29
Identities = 48/119 (40%), Positives = 83/119 (69%)
Query: 84 WLTEKMREANFTVSSMHGDMPQKERDGIMKEFRSGTSRVLITTDVWARGIDVQQVSLVIN 143
WL ++ + V+ + G+M ++R +++ FR G +VL+TT+V ARGIDV+QVS+VIN
Sbjct: 353 WLAAELSKEGHQVALLSGEMMVEQRAAVIERFREGKEKVLVTTNVCARGIDVEQVSVVIN 412
Query: 144 YDLPNNR------ELYIHRIGRSGRFGRKGVAISFVKSD-DIRILRDIEQYYSTQIDEM 195
+DLP ++ E Y+HRIGR+GRFG++G+A++ V S + IL I+++++ +I+ +
Sbjct: 413 FDLPVDKDGNPDNETYLHRIGRTGRFGKRGLAVNMVDSKHSMNILNRIQEHFNKKIERL 471
Score = 97 (39.2 bits), Expect = 9.7e-29, Sum P(2) = 9.7e-29
Identities = 26/69 (37%), Positives = 39/69 (56%)
Query: 20 KLDYGQ----HVVSGTPGRVFDMIRR-RVLRTRNIKMLVLDEADEML-NKGFKEQIYDVY 73
KL+ GQ +V GTPG V D + + + + IK+ VLDEAD M+ +G ++Q +
Sbjct: 207 KLERGQKISEQIVIGTPGTVLDWCSKLKFIDPKKIKVFVLDEADVMIATQGHQDQSIRIQ 266
Query: 74 RYLPPATQV 82
R LP Q+
Sbjct: 267 RMLPRNCQM 275
>TIGR_CMR|CPS_3401 [details] [associations]
symbol:CPS_3401 "ATP-dependent RNA helicase, DEAD box
family" species:167879 "Colwellia psychrerythraea 34H" [GO:0004004
"ATP-dependent RNA helicase activity" evidence=ISS] [GO:0016070
"RNA metabolic process" evidence=ISS] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 EMBL:CP000083 GenomeReviews:CP000083_GR
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
HOGENOM:HOG000268807 RefSeq:YP_270076.1 ProteinModelPortal:Q47YP4
STRING:Q47YP4 GeneID:3521057 KEGG:cps:CPS_3401 PATRIC:21469753
OMA:HLIKEHQ ProtClustDB:CLSK907013
BioCyc:CPSY167879:GI48-3430-MONOMER Uniprot:Q47YP4
Length = 432
Score = 223 (83.6 bits), Expect = 9.8e-29, Sum P(2) = 9.8e-29
Identities = 43/102 (42%), Positives = 65/102 (63%)
Query: 85 LTEKMREANFTVSSMHGDMPQKERDGIMKEFRSGTSRVLITTDVWARGIDVQQVSLVINY 144
L EK+ + T + HGD Q ER ++ F++G VLI TD+ ARG+D++++ +VIN+
Sbjct: 271 LAEKLAKRGITAAVFHGDKGQSERSRVLDGFKAGDIEVLIATDIAARGLDIEKLPVVINF 330
Query: 145 DLPNNRELYIHRIGRSGRFGRKGVAISFVKSDDIRILRDIEQ 186
+LP + Y+HRIGRSGR G G+AIS + +D IE+
Sbjct: 331 NLPRSPSDYMHRIGRSGRAGEVGLAISLIDHEDYHHFSVIEK 372
Score = 123 (48.4 bits), Expect = 9.8e-29, Sum P(2) = 9.8e-29
Identities = 26/75 (34%), Positives = 41/75 (54%)
Query: 7 ACIGGTNLSEDLRKLDYGQHVVSGTPGRVFDMIRRRVLRTRNIKMLVLDEADEMLNKGFK 66
A GG +++ + L G ++ TPGR+ D+I ++ +K LVLDEAD ML+ GF
Sbjct: 120 AVFGGVSVNIQMLALRGGVDILVATPGRLLDLISSNAIKLDKVKTLVLDEADRMLSLGFT 179
Query: 67 EQIYDVYRYLPPATQ 81
E++ + P Q
Sbjct: 180 EELTALLALTPKKKQ 194
>UNIPROTKB|Q9KLH6 [details] [associations]
symbol:VC_A0768 "ATP-dependent RNA helicase, DEAD box
family" species:243277 "Vibrio cholerae O1 biovar El Tor str.
N16961" [GO:0008026 "ATP-dependent helicase activity" evidence=ISS]
[GO:0008152 "metabolic process" evidence=ISS] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 EMBL:AE003853 GenomeReviews:AE003853_GR
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 HSSP:P10081 KO:K11927
OMA:LECVINY PIR:H82418 RefSeq:NP_233154.1 ProteinModelPortal:Q9KLH6
DNASU:2612338 GeneID:2612338 KEGG:vch:VCA0768 PATRIC:20086092
ProtClustDB:CLSK869757 Uniprot:Q9KLH6
Length = 422
Score = 221 (82.9 bits), Expect = 1.1e-28, Sum P(2) = 1.1e-28
Identities = 45/117 (38%), Positives = 71/117 (60%)
Query: 83 DWLTEKMREANFTVSSMHGDMPQKERDGIMKEFRSGTSRVLITTDVWARGIDVQQVSLVI 142
D L E+++ S++GD Q R + +F++G R LI TDV ARG+D+ Q+ V+
Sbjct: 265 DALAEELKLDGIKAVSINGDKSQGARQKALDDFKAGKVRALIATDVAARGLDIAQLEQVV 324
Query: 143 NYDLPNNRELYIHRIGRSGRFGRKGVAISFVKSDDIRILRDIEQYYSTQIDEMPMNG 199
NYD+P E Y+HRIGR+GR G G+A+S + D+ L IE+ +T++ + + G
Sbjct: 325 NYDMPFKAEDYVHRIGRTGRAGLAGLAVSLLSHDEQPQLEAIERLLNTRLPQEWLKG 381
Score = 124 (48.7 bits), Expect = 1.1e-28, Sum P(2) = 1.1e-28
Identities = 29/75 (38%), Positives = 40/75 (53%)
Query: 7 ACIGGTNLSEDLRKLDYGQHVVSGTPGRVFDMIRRRVLRTRNIKMLVLDEADEMLNKGFK 66
A GGT++ L L G ++ TPGR+ D + L +++LVLDEAD ML+ GF
Sbjct: 114 AVYGGTSMKVQLNHLRGGVDILIATPGRLLDHAHVKSLFLGKVEVLVLDEADRMLDMGFM 173
Query: 67 EQIYDVYRYLPPATQ 81
+ V R L P Q
Sbjct: 174 PDLQRVLRRLSPLRQ 188
>TIGR_CMR|VC_A0768 [details] [associations]
symbol:VC_A0768 "ATP-dependent RNA helicase, DEAD/DEAH box
family" species:686 "Vibrio cholerae O1 biovar El Tor" [GO:0008026
"ATP-dependent helicase activity" evidence=ISS] [GO:0008152
"metabolic process" evidence=ISS] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 EMBL:AE003853 GenomeReviews:AE003853_GR
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 HSSP:P10081 KO:K11927
OMA:LECVINY PIR:H82418 RefSeq:NP_233154.1 ProteinModelPortal:Q9KLH6
DNASU:2612338 GeneID:2612338 KEGG:vch:VCA0768 PATRIC:20086092
ProtClustDB:CLSK869757 Uniprot:Q9KLH6
Length = 422
Score = 221 (82.9 bits), Expect = 1.1e-28, Sum P(2) = 1.1e-28
Identities = 45/117 (38%), Positives = 71/117 (60%)
Query: 83 DWLTEKMREANFTVSSMHGDMPQKERDGIMKEFRSGTSRVLITTDVWARGIDVQQVSLVI 142
D L E+++ S++GD Q R + +F++G R LI TDV ARG+D+ Q+ V+
Sbjct: 265 DALAEELKLDGIKAVSINGDKSQGARQKALDDFKAGKVRALIATDVAARGLDIAQLEQVV 324
Query: 143 NYDLPNNRELYIHRIGRSGRFGRKGVAISFVKSDDIRILRDIEQYYSTQIDEMPMNG 199
NYD+P E Y+HRIGR+GR G G+A+S + D+ L IE+ +T++ + + G
Sbjct: 325 NYDMPFKAEDYVHRIGRTGRAGLAGLAVSLLSHDEQPQLEAIERLLNTRLPQEWLKG 381
Score = 124 (48.7 bits), Expect = 1.1e-28, Sum P(2) = 1.1e-28
Identities = 29/75 (38%), Positives = 40/75 (53%)
Query: 7 ACIGGTNLSEDLRKLDYGQHVVSGTPGRVFDMIRRRVLRTRNIKMLVLDEADEMLNKGFK 66
A GGT++ L L G ++ TPGR+ D + L +++LVLDEAD ML+ GF
Sbjct: 114 AVYGGTSMKVQLNHLRGGVDILIATPGRLLDHAHVKSLFLGKVEVLVLDEADRMLDMGFM 173
Query: 67 EQIYDVYRYLPPATQ 81
+ V R L P Q
Sbjct: 174 PDLQRVLRRLSPLRQ 188
>DICTYBASE|DDB_G0283661 [details] [associations]
symbol:ddx3 "DEAD/DEAH box helicase" species:44689
"Dictyostelium discoideum" [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0006397 "mRNA processing"
evidence=ISS] [GO:0004004 "ATP-dependent RNA helicase activity"
evidence=ISS] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0006413 "translational initiation" evidence=IEA] [GO:0006412
"translation" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0003743 "translation initiation factor activity" evidence=IEA]
[GO:0003723 "RNA binding" evidence=IEA] [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0044351 "macropinocytosis" evidence=RCA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 dictyBase:DDB_G0283661 GO:GO:0005524 GO:GO:0005737
EMBL:AAFI02000056 GenomeReviews:CM000153_GR GO:GO:0006397
GO:GO:0003743 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0004004 eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
KO:K11594 HSSP:P09052 RefSeq:XP_638950.1 ProteinModelPortal:Q54QS3
SMR:Q54QS3 PRIDE:Q54QS3 EnsemblProtists:DDB0233447 GeneID:8624189
KEGG:ddi:DDB_G0283661 OMA:SEHICAP Uniprot:Q54QS3
Length = 712
Score = 234 (87.4 bits), Expect = 1.3e-28, Sum P(2) = 1.3e-28
Identities = 44/123 (35%), Positives = 77/123 (62%)
Query: 83 DWLTEKMREANFTVSSMHGDMPQKERDGIMKEFRSGTSRVLITTDVWARGIDVQQVSLVI 142
D LT + + NF + +HGD+ Q ER+ ++ FRS + L+ TD+ +RG+ + V+LVI
Sbjct: 518 DTLTYFLNQRNFPTTCIHGDLTQPERENALQSFRSFATPFLVATDIASRGLHIGNVNLVI 577
Query: 143 NYDLPNNRELYIHRIGRSGRFGRKGVAISFVKSDDIRILRDIEQYYSTQIDEMPMNGKRS 202
N+DLP + +Y+HRIGR+GR G+KG+AISF + + ++ + ++P ++
Sbjct: 578 NFDLPTDIHIYVHRIGRTGRAGKKGLAISFFNEKNKPVGAELLKLMKASNQDIPDWFEKM 637
Query: 203 LHS 205
+H+
Sbjct: 638 VHN 640
Score = 120 (47.3 bits), Expect = 1.3e-28, Sum P(2) = 1.3e-28
Identities = 25/63 (39%), Positives = 37/63 (58%)
Query: 10 GGTNLSEDLRKLDYGQHVVSGTPGRVFDMIRRRVLRTRNIKMLVLDEADEMLNKGFKEQI 69
GG + + +LD G ++ T GR+ D++ R + IK LVLDEAD ML+ GF+ QI
Sbjct: 366 GGAEVFHQINELDRGCDILVATTGRLVDLLMRGRVSLSKIKYLVLDEADRMLDMGFEPQI 425
Query: 70 YDV 72
+
Sbjct: 426 RQI 428
>UNIPROTKB|F1NRN3 [details] [associations]
symbol:DDX20 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
GeneTree:ENSGT00530000062880 EMBL:AADN02044991 IPI:IPI00820769
ProteinModelPortal:F1NRN3 Ensembl:ENSGALT00000002285 Uniprot:F1NRN3
Length = 676
Score = 195 (73.7 bits), Expect = 1.4e-28, Sum P(2) = 1.4e-28
Identities = 41/113 (36%), Positives = 69/113 (61%)
Query: 85 LTEKMREANFTVSSMHGDMPQKERDGIMKEFRSGTSRVLITTDVWARGIDVQQVSLVINY 144
L E + F + G M Q +R M + + RVLI+TD+ +RGID ++V+LVIN
Sbjct: 284 LAEILTSRGFPAECISGSMNQSQRLDAMAKLKQFHCRVLISTDLTSRGIDAEKVNLVINL 343
Query: 145 DLPNNRELYIHRIGRSGRFGRKGVAISFV-KSDDIRILRDIEQYYSTQIDEMP 196
D+P + E Y+HRIGR+GRFG G+++++ + ++ ++ I Q + Q+ +P
Sbjct: 344 DVPVDWETYMHRIGRAGRFGTLGLSVTYCCRGEEENMMMKIAQKCNLQLLPLP 396
Score = 159 (61.0 bits), Expect = 1.4e-28, Sum P(2) = 1.4e-28
Identities = 34/81 (41%), Positives = 52/81 (64%)
Query: 3 VQCHACIGGTNLSEDLRKLDYGQHVVSGTPGRVFDMIRRRVLRTRNIKMLVLDEADEMLN 62
++CH IGGT LS+D +L H+ G+PGR+ +I L T +I++ +LDEAD++L
Sbjct: 119 LECHVFIGGTPLSQDKVRLKKC-HIAVGSPGRIKQLIELDYLNTASIRLFILDEADKLLE 177
Query: 63 KG-FKEQIYDVYRYLPPATQV 82
+G F+EQI +Y LP Q+
Sbjct: 178 EGSFQEQINWIYSSLPANKQM 198
Score = 36 (17.7 bits), Expect = 6.6e-12, Sum P(2) = 6.6e-12
Identities = 11/49 (22%), Positives = 21/49 (42%)
Query: 101 GDMPQKERDGIMKEFRSGTSRVLITTDVWARGIDVQQVSLVINYDLPNN 149
GD + R+G ++ +R + DV + D +S ++ NN
Sbjct: 575 GDQRELPRNGGIEWKEVECNRDTVANDVLSDDSDASYISRASSHGSENN 623
>ASPGD|ASPL0000013201 [details] [associations]
symbol:AN4233 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0005829 "cytosol"
evidence=IEA] InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270
Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490
GO:GO:0005524 GO:GO:0005634 GO:GO:0003723 EMBL:BN001302
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0006364
GO:GO:0008026 EMBL:AACD01000068 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 HOGENOM:HOG000268802 KO:K14777 OMA:IFIPSKF
RefSeq:XP_661837.1 ProteinModelPortal:Q5B5E7 SMR:Q5B5E7
STRING:Q5B5E7 EnsemblFungi:CADANIAT00004427 GeneID:2873652
KEGG:ani:AN4233.2 OrthoDB:EOG4ZPJ3P Uniprot:Q5B5E7
Length = 465
Score = 225 (84.3 bits), Expect = 1.5e-28, Sum P(2) = 1.5e-28
Identities = 44/106 (41%), Positives = 65/106 (61%)
Query: 89 MREANFTVSSMHGDMPQKERDGIMKEFRSGTSRVLITTDVWARGIDVQQVSLVINYDLPN 148
+R F +HG + Q R G + +FRS + +L+ TDV ARG+D+ V +V N+DLP
Sbjct: 305 LRALGFGAIPLHGQLSQSARLGALGKFRSRSRDILVATDVAARGLDIPSVDVVFNFDLPM 364
Query: 149 NRELYIHRIGRSGRFGRKGVAISFVKSDDIRILRDIEQYYSTQIDE 194
+ + YIHR+GR+ R G+ GVAISFV D+ + IE S ++ E
Sbjct: 365 DSKTYIHRVGRTARAGKSGVAISFVTQYDVEVWLRIEHALSKKLPE 410
Score = 121 (47.7 bits), Expect = 1.5e-28, Sum P(2) = 1.5e-28
Identities = 25/78 (32%), Positives = 41/78 (52%)
Query: 1 MNVQCHACIGGTNLSEDLRKLDYGQHVVSGTPGRVFDMIRR-RVLRTRNIKMLVLDEADE 59
+ V+C +GG ++ L H++ TPGR+ D + + RN+K L +DEAD
Sbjct: 141 IGVRCAVIVGGMDMVAQSIALGKKPHIIVATPGRLLDHLENTKGFSLRNLKYLAIDEADR 200
Query: 60 MLNKGFKEQIYDVYRYLP 77
+L+ F E + + R LP
Sbjct: 201 LLDMDFGESLDKIIRILP 218
>UNIPROTKB|Q8EJQ5 [details] [associations]
symbol:rhlB "ATP-dependent RNA helicase RhlB"
species:211586 "Shewanella oneidensis MR-1" [GO:0008150
"biological_process" evidence=ND] HAMAP:MF_00661 InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 InterPro:IPR023554
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0003723 EMBL:AE014299
GenomeReviews:AE014299_GR InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0004004 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 HOGENOM:HOG000268807 KO:K03732 ProtClustDB:PRK04837
RefSeq:NP_716045.1 ProteinModelPortal:Q8EJQ5 GeneID:1168284
KEGG:son:SO_0407 PATRIC:23520517 OMA:PANAERQ Uniprot:Q8EJQ5
Length = 439
Score = 217 (81.4 bits), Expect = 1.6e-28, Sum P(2) = 1.6e-28
Identities = 45/97 (46%), Positives = 63/97 (64%)
Query: 96 VSSMHGDMPQKERDGIMKEFRSGTSRVLITTDVWARGIDVQQVSLVINYDLPNNRELYIH 155
V + GD+PQK+R I+++F G +L+ TDV ARG+ + VS V NYDLP++ E Y+H
Sbjct: 283 VGLLTGDVPQKKRIRILEQFTQGQLDILVATDVAARGLHISDVSHVYNYDLPDDCEDYVH 342
Query: 156 RIGRSGRFGRKGVAISFVKSDDIRILRDIEQYYSTQI 192
RIGR+GR G KGV++SF + L IE Y + I
Sbjct: 343 RIGRTGRAGNKGVSVSFACEEYALNLPAIETYINHSI 379
Score = 128 (50.1 bits), Expect = 1.6e-28, Sum P(2) = 1.6e-28
Identities = 26/72 (36%), Positives = 42/72 (58%)
Query: 10 GGTNLSEDLRKLDYGQHVVSGTPGRVFDMIRRRVLRTRNIKMLVLDEADEMLNKGFKEQI 69
GG + + LD G ++ GT GR+ D +R+ ++ I+ +VLDEAD M + GF + I
Sbjct: 120 GGESYDVQRKVLDQGVDILIGTTGRIIDYVRQGIINLNAIQAVVLDEADRMFDLGFIKDI 179
Query: 70 YDVYRYLPPATQ 81
++R +P A Q
Sbjct: 180 RFLFRRMPNADQ 191
>TIGR_CMR|SO_0407 [details] [associations]
symbol:SO_0407 "ATP-dependent RNA helicase, DEAD box
family" species:211586 "Shewanella oneidensis MR-1" [GO:0008150
"biological_process" evidence=ND] [GO:0008026 "ATP-dependent
helicase activity" evidence=ISS] HAMAP:MF_00661 InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 InterPro:IPR023554
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0003723 EMBL:AE014299
GenomeReviews:AE014299_GR InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0004004 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 HOGENOM:HOG000268807 KO:K03732 ProtClustDB:PRK04837
RefSeq:NP_716045.1 ProteinModelPortal:Q8EJQ5 GeneID:1168284
KEGG:son:SO_0407 PATRIC:23520517 OMA:PANAERQ Uniprot:Q8EJQ5
Length = 439
Score = 217 (81.4 bits), Expect = 1.6e-28, Sum P(2) = 1.6e-28
Identities = 45/97 (46%), Positives = 63/97 (64%)
Query: 96 VSSMHGDMPQKERDGIMKEFRSGTSRVLITTDVWARGIDVQQVSLVINYDLPNNRELYIH 155
V + GD+PQK+R I+++F G +L+ TDV ARG+ + VS V NYDLP++ E Y+H
Sbjct: 283 VGLLTGDVPQKKRIRILEQFTQGQLDILVATDVAARGLHISDVSHVYNYDLPDDCEDYVH 342
Query: 156 RIGRSGRFGRKGVAISFVKSDDIRILRDIEQYYSTQI 192
RIGR+GR G KGV++SF + L IE Y + I
Sbjct: 343 RIGRTGRAGNKGVSVSFACEEYALNLPAIETYINHSI 379
Score = 128 (50.1 bits), Expect = 1.6e-28, Sum P(2) = 1.6e-28
Identities = 26/72 (36%), Positives = 42/72 (58%)
Query: 10 GGTNLSEDLRKLDYGQHVVSGTPGRVFDMIRRRVLRTRNIKMLVLDEADEMLNKGFKEQI 69
GG + + LD G ++ GT GR+ D +R+ ++ I+ +VLDEAD M + GF + I
Sbjct: 120 GGESYDVQRKVLDQGVDILIGTTGRIIDYVRQGIINLNAIQAVVLDEADRMFDLGFIKDI 179
Query: 70 YDVYRYLPPATQ 81
++R +P A Q
Sbjct: 180 RFLFRRMPNADQ 191
>TIGR_CMR|SPO_3833 [details] [associations]
symbol:SPO_3833 "ATP-dependent RNA helicase, DEAD/DEAH box
family" species:246200 "Ruegeria pomeroyi DSS-3" [GO:0008026
"ATP-dependent helicase activity" evidence=ISS] [GO:0008152
"metabolic process" evidence=ISS] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
EMBL:CP000031 GenomeReviews:CP000031_GR GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
KO:K05592 InterPro:IPR005580 Pfam:PF03880 RefSeq:YP_169021.1
ProteinModelPortal:Q5LLT8 GeneID:3196362 KEGG:sil:SPO3833
PATRIC:23381169 HOGENOM:HOG000268794 OMA:MQHRSGR Uniprot:Q5LLT8
Length = 709
Score = 199 (75.1 bits), Expect = 1.6e-28, Sum P(2) = 1.6e-28
Identities = 40/89 (44%), Positives = 56/89 (62%)
Query: 85 LTEKMREANFTVSSMHGDMPQKERDGIMKEFRSGTSRVLITTDVWARGIDVQQVSLVINY 144
LT ++ F V S+ G++ Q ER ++ R G +RV + TDV ARGID+ + LVI+
Sbjct: 281 LTARLANRGFAVVSLSGELSQDERSHALQAMRDGRARVCVATDVAARGIDLPNLDLVIHA 340
Query: 145 DLPNNRELYIHRIGRSGRFGRKGVAISFV 173
DLP N E +HR GR+GR GRKG++ V
Sbjct: 341 DLPTNTEGLLHRSGRTGRAGRKGISALIV 369
Score = 155 (59.6 bits), Expect = 1.6e-28, Sum P(2) = 1.6e-28
Identities = 31/62 (50%), Positives = 42/62 (67%)
Query: 8 CIGGTNLSEDLRKLDYGQHVVSGTPGRVFDMIRRRVLRTRNIKMLVLDEADEMLNKGFKE 67
CIGG + + R L+ G H+V GTPGR+ D I R L +I+ +VLDEADEML+ GF+E
Sbjct: 129 CIGGMDARTERRTLERGAHIVVGTPGRLRDHITRGALDLADIRAVVLDEADEMLDLGFRE 188
Query: 68 QI 69
+
Sbjct: 189 DL 190
>ZFIN|ZDB-GENE-031030-3 [details] [associations]
symbol:ddx49 "DEAD (Asp-Glu-Ala-Asp) box polypeptide
49" species:7955 "Danio rerio" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 ZFIN:ZDB-GENE-031030-3 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 HSSP:Q58083 KO:K14778
HOVERGEN:HBG100512 CTD:54555 EMBL:BC047834 IPI:IPI00551936
RefSeq:NP_938179.1 UniGene:Dr.77634 ProteinModelPortal:Q7ZUT9
STRING:Q7ZUT9 GeneID:386632 KEGG:dre:386632 InParanoid:Q7ZUT9
NextBio:20813961 ArrayExpress:Q7ZUT9 Uniprot:Q7ZUT9
Length = 468
Score = 249 (92.7 bits), Expect = 1.6e-28, Sum P(2) = 1.6e-28
Identities = 49/119 (41%), Positives = 75/119 (63%)
Query: 85 LTEKMREANFTVSSMHGDMPQKERDGIMKEFRSGTSRVLITTDVWARGIDVQQVSLVINY 144
LT +RE NF S+H M Q++R + +F+S ++LI TDV ARG+D+ V +VIN+
Sbjct: 264 LTMMLREFNFPTISLHSMMKQRQRFANLAKFKSNVFKILIATDVAARGLDIPTVQVVINH 323
Query: 145 DLPNNRELYIHRIGRSGRFGRKGVAISFVKSDDIRILRDIEQYYSTQIDEMPMNGKRSL 203
+ P ++YIHR+GR+ R GR GV+I+ V DI ++ IE+ T++ E P+ K L
Sbjct: 324 NTPGLPKIYIHRVGRTARAGRNGVSITLVTQYDIHLINAIEEQNQTKLKEFPIEEKEVL 382
Score = 95 (38.5 bits), Expect = 1.6e-28, Sum P(2) = 1.6e-28
Identities = 21/57 (36%), Positives = 32/57 (56%)
Query: 9 IGGTNLSEDLRKLDYGQHVVSGTPGRVFDMIRRR-VLRTRNIKMLVLDEADEMLNKG 64
+GG ++ +L HVV TPGR+ D IR + I+ L++DEAD +L +G
Sbjct: 105 VGGMDMVTQGLELSKKPHVVVATPGRLADHIRSSDTINLNRIQFLIMDEADRLLEQG 161
>MGI|MGI:1915005 [details] [associations]
symbol:Ddx47 "DEAD (Asp-Glu-Ala-Asp) box polypeptide 47"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0003723 "RNA binding" evidence=IEA] [GO:0004386 "helicase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0005730 "nucleolus"
evidence=ISO] [GO:0006364 "rRNA processing" evidence=ISO]
[GO:0006397 "mRNA processing" evidence=IEA] [GO:0006915 "apoptotic
process" evidence=ISO] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0008380 "RNA splicing" evidence=ISO]
[GO:0016787 "hydrolase activity" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 MGI:MGI:1915005
GO:GO:0005524 GO:GO:0006915 GO:GO:0005730 GO:GO:0008380
GO:GO:0006397 GO:GO:0003723 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0006364 GO:GO:0008026 eggNOG:COG0513
InterPro:IPR014014 PROSITE:PS51195 HOGENOM:HOG000268802
GeneTree:ENSGT00670000098028 CTD:51202 HOVERGEN:HBG100512 KO:K14777
OMA:IFIPSKF OrthoDB:EOG4TXBRS ChiTaRS:DDX47 EMBL:AK010310
EMBL:AK076982 IPI:IPI00187240 RefSeq:NP_080636.2 UniGene:Mm.166524
ProteinModelPortal:Q9CWX9 SMR:Q9CWX9 IntAct:Q9CWX9
PhosphoSite:Q9CWX9 PaxDb:Q9CWX9 PRIDE:Q9CWX9
Ensembl:ENSMUST00000032326 GeneID:67755 KEGG:mmu:67755
InParanoid:Q9CWX9 NextBio:325481 Bgee:Q9CWX9 CleanEx:MM_DDX47
Genevestigator:Q9CWX9 GermOnline:ENSMUSG00000030204 Uniprot:Q9CWX9
Length = 455
Score = 224 (83.9 bits), Expect = 1.7e-28, Sum P(2) = 1.7e-28
Identities = 40/108 (37%), Positives = 66/108 (61%)
Query: 89 MREANFTVSSMHGDMPQKERDGIMKEFRSGTSRVLITTDVWARGIDVQQVSLVINYDLPN 148
+R FT +HG M Q +R G + +F++ +L+ TDV +RG+D+ V +V+N+D+P
Sbjct: 283 LRNLGFTAIPLHGQMSQSKRLGSLNKFKAKARSILLATDVASRGLDIPHVDVVVNFDIPT 342
Query: 149 NRELYIHRIGRSGRFGRKGVAISFVKSDDIRILRDIEQYYSTQIDEMP 196
+ + YIHR+GR+ R GR G AI+FV D+ + + IE ++ P
Sbjct: 343 HSKDYIHRVGRTARAGRSGKAITFVTQYDVELFQRIEHLIGKKLPVFP 390
Score = 121 (47.7 bits), Expect = 1.7e-28, Sum P(2) = 1.7e-28
Identities = 27/79 (34%), Positives = 45/79 (56%)
Query: 1 MNVQCHACIGGTN-LSEDLRKLDYGQHVVSGTPGRVFDMIRR-RVLRTRNIKMLVLDEAD 58
+ VQC +GG + +S+ L L H+V TPGR+ D + + R +K LV+DEAD
Sbjct: 119 IGVQCAVIVGGIDSMSQSLA-LAKKPHIVIATPGRLIDHLENTKGFNLRALKYLVMDEAD 177
Query: 59 EMLNKGFKEQIYDVYRYLP 77
+LN F+ ++ + + +P
Sbjct: 178 RILNMDFETEVDKILKVIP 196
>UNIPROTKB|G3V727 [details] [associations]
symbol:Ddx47 "Protein Ddx47" species:10116 "Rattus
norvegicus" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005730 "nucleolus"
evidence=IEA] [GO:0006364 "rRNA processing" evidence=IEA]
[GO:0006915 "apoptotic process" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0008380 "RNA
splicing" evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 EMBL:CH473964
GeneTree:ENSGT00670000098028 CTD:51202 KO:K14777 OMA:IFIPSKF
RefSeq:NP_001015005.2 UniGene:Rn.73790 Ensembl:ENSRNOT00000011096
GeneID:297685 KEGG:rno:297685 RGD:1310437 NextBio:642541
Uniprot:G3V727
Length = 455
Score = 224 (83.9 bits), Expect = 1.7e-28, Sum P(2) = 1.7e-28
Identities = 40/108 (37%), Positives = 66/108 (61%)
Query: 89 MREANFTVSSMHGDMPQKERDGIMKEFRSGTSRVLITTDVWARGIDVQQVSLVINYDLPN 148
+R FT +HG M Q +R G + +F++ +L+ TDV +RG+D+ V +V+N+D+P
Sbjct: 283 LRNLGFTAIPLHGQMSQSKRLGSLNKFKAKARSILLATDVASRGLDIPHVDVVVNFDIPT 342
Query: 149 NRELYIHRIGRSGRFGRKGVAISFVKSDDIRILRDIEQYYSTQIDEMP 196
+ + YIHR+GR+ R GR G AI+FV D+ + + IE ++ P
Sbjct: 343 HSKDYIHRVGRTARAGRSGKAITFVTQYDVELFQRIEHLIGKKLPVFP 390
Score = 121 (47.7 bits), Expect = 1.7e-28, Sum P(2) = 1.7e-28
Identities = 27/79 (34%), Positives = 45/79 (56%)
Query: 1 MNVQCHACIGGTN-LSEDLRKLDYGQHVVSGTPGRVFDMIRR-RVLRTRNIKMLVLDEAD 58
+ VQC +GG + +S+ L L H+V TPGR+ D + + R +K LV+DEAD
Sbjct: 119 IGVQCAVIVGGIDSMSQSLA-LAKKPHIVIATPGRLIDHLENTKGFNLRALKYLVMDEAD 177
Query: 59 EMLNKGFKEQIYDVYRYLP 77
+LN F+ ++ + + +P
Sbjct: 178 RILNMDFETEVDKILKVIP 196
>UNIPROTKB|Q29S22 [details] [associations]
symbol:DDX47 "Probable ATP-dependent RNA helicase DDX47"
species:9913 "Bos taurus" [GO:0005730 "nucleolus" evidence=ISS]
[GO:0008380 "RNA splicing" evidence=ISS] [GO:0006915 "apoptotic
process" evidence=ISS] [GO:0006364 "rRNA processing" evidence=ISS]
[GO:0006397 "mRNA processing" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0006915 GO:GO:0005730
GO:GO:0008380 GO:GO:0006397 GO:GO:0003723 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0006364 GO:GO:0008026
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
HOGENOM:HOG000268802 GeneTree:ENSGT00670000098028 EMBL:BC113207
IPI:IPI00688068 RefSeq:NP_001039850.1 UniGene:Bt.23258
ProteinModelPortal:Q29S22 SMR:Q29S22 PRIDE:Q29S22
Ensembl:ENSBTAT00000003058 GeneID:534721 KEGG:bta:534721 CTD:51202
HOVERGEN:HBG100512 InParanoid:Q29S22 KO:K14777 OMA:IFIPSKF
OrthoDB:EOG4TXBRS NextBio:20876515 Uniprot:Q29S22
Length = 457
Score = 224 (83.9 bits), Expect = 1.8e-28, Sum P(2) = 1.8e-28
Identities = 40/108 (37%), Positives = 66/108 (61%)
Query: 89 MREANFTVSSMHGDMPQKERDGIMKEFRSGTSRVLITTDVWARGIDVQQVSLVINYDLPN 148
+R FT +HG M Q +R G + +F++ +L+ TDV +RG+D+ V +V+N+D+P
Sbjct: 285 LRNLGFTAIPLHGQMSQSKRLGSLNKFKAKARSILLATDVASRGLDIPHVDVVVNFDIPT 344
Query: 149 NRELYIHRIGRSGRFGRKGVAISFVKSDDIRILRDIEQYYSTQIDEMP 196
+ + YIHR+GR+ R GR G AI+FV D+ + + IE ++ P
Sbjct: 345 HSKDYIHRVGRTARAGRSGKAITFVTQYDVELFQRIEHLIGKKLPVFP 392
Score = 121 (47.7 bits), Expect = 1.8e-28, Sum P(2) = 1.8e-28
Identities = 27/79 (34%), Positives = 45/79 (56%)
Query: 1 MNVQCHACIGGTN-LSEDLRKLDYGQHVVSGTPGRVFDMIRR-RVLRTRNIKMLVLDEAD 58
+ VQC +GG + +S+ L L H+V TPGR+ D + + R +K LV+DEAD
Sbjct: 121 IGVQCAVIVGGIDSMSQSLA-LAKKPHIVIATPGRLIDHLENTKGFNLRALKYLVMDEAD 179
Query: 59 EMLNKGFKEQIYDVYRYLP 77
+LN F+ ++ + + +P
Sbjct: 180 RILNMDFETEVDKILKVIP 198
>UNIPROTKB|F1NAH6 [details] [associations]
symbol:LOC100859810 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0003677 "DNA binding"
evidence=IEA] [GO:0005783 "endoplasmic reticulum" evidence=IEA]
[GO:0035458 "cellular response to interferon-beta" evidence=IEA]
[GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0051607 "defense response
to virus" evidence=IEA] [GO:0071013 "catalytic step 2 spliceosome"
evidence=IEA] InterPro:IPR001650 InterPro:IPR001878
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS51194
SMART:SM00343 SMART:SM00490 GO:GO:0005783 GO:GO:0005524
GO:GO:0003677 GO:GO:0008270 GO:GO:0045944 GO:GO:0035458
GO:GO:0071013 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
GeneTree:ENSGT00620000087942 OMA:KDQEERS EMBL:AADN02028748
EMBL:AADN02028749 EMBL:AADN02068652 IPI:IPI00576331
Ensembl:ENSGALT00000004794 Uniprot:F1NAH6
Length = 607
Score = 200 (75.5 bits), Expect = 1.9e-28, Sum P(2) = 1.9e-28
Identities = 41/105 (39%), Positives = 63/105 (60%)
Query: 82 VDWLTEKMREANFTVSSMHGDMPQKERDGIMKEFRSGTSRVLITTDVWARGIDVQQVSLV 141
VD + E + ++HG Q+ER ++ FR G VL+ TDV ++G+D + V
Sbjct: 441 VDAIHEYLLLKGVEAVAIHGGKDQEERTKAIEAFRDGKKDVLVATDVASKGLDFPAIQHV 500
Query: 142 INYDLPNNRELYIHRIGRSGRFGRKGVAISFV-KSDDIRILRDIE 185
INYD+P E Y+HRIGR+GR G G+A +F+ K+ D +L D++
Sbjct: 501 INYDMPEEIENYVHRIGRTGRSGNTGIATTFINKACDESVLMDLK 545
Score = 151 (58.2 bits), Expect = 1.9e-28, Sum P(2) = 1.9e-28
Identities = 29/99 (29%), Positives = 56/99 (56%)
Query: 3 VQCHACIGGTNLSEDLRKLDYGQHVVSGTPGRVFDMIRRRVLRTRNIKMLVLDEADEMLN 62
++C CIGG ++ E + + +G H++ TPGR+ D+++++++ + L LDEAD M++
Sbjct: 288 LRCALCIGGMSVKEQMETIKHGVHMMVATPGRLMDLLQKKMVSLDICRYLALDEADRMID 347
Query: 63 KGFKEQIYDVYRYLPPATQVDWLTEKMREA--NFTVSSM 99
GF+ I ++ Y Q + M + NF S++
Sbjct: 348 MGFEGDIRTIFSYFKGQRQTLLFSATMPKKIQNFAKSAL 386
>POMBASE|SPBC543.06c [details] [associations]
symbol:dbp8 "ATP-dependent RNA helicase Dbp8
(predicted)" species:4896 "Schizosaccharomyces pombe" [GO:0003723
"RNA binding" evidence=IEA] [GO:0004004 "ATP-dependent RNA helicase
activity" evidence=ISO] [GO:0005524 "ATP binding" evidence=ISM]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005730 "nucleolus"
evidence=ISO;IDA] [GO:0006364 "rRNA processing" evidence=ISO]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 PomBase:SPBC543.06c GO:GO:0005524 GO:GO:0005730
EMBL:CU329671 GenomeReviews:CU329671_GR GO:GO:0003723
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0006364
GO:GO:0004004 eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
KO:K14778 HOGENOM:HOG000268802 OMA:EVRTVEQ OrthoDB:EOG4PP1RW
RefSeq:NP_596794.1 ProteinModelPortal:Q9HGM5 STRING:Q9HGM5
EnsemblFungi:SPBC543.06c.1 GeneID:2541069 KEGG:spo:SPBC543.06c
NextBio:20802183 Uniprot:Q9HGM5
Length = 453
Score = 224 (83.9 bits), Expect = 2.1e-28, Sum P(2) = 2.1e-28
Identities = 42/106 (39%), Positives = 67/106 (63%)
Query: 89 MREANFTVSSMHGDMPQKERDGIMKEFRSGTSRVLITTDVWARGIDVQQVSLVINYDLPN 148
+R V+ +H +M Q+ER + FR+ +++L+ TDV +RG+D+ V LVIN+DLP
Sbjct: 278 LRLLELRVTELHSEMVQRERINSLGRFRAEAAKILVATDVASRGLDIPSVQLVINFDLPR 337
Query: 149 NRELYIHRIGRSGRFGRKGVAISFVKSDDIRILRDIEQYYSTQIDE 194
+ + YIHR+GR+ R GR G +IS V D+ ++ IE T++ E
Sbjct: 338 DPDDYIHRVGRTARAGRSGESISIVTERDVDLVHAIEDRVGTKLSE 383
Score = 120 (47.3 bits), Expect = 2.1e-28, Sum P(2) = 2.1e-28
Identities = 32/82 (39%), Positives = 45/82 (54%)
Query: 1 MNVQCHACI-GGTNLSEDLRKLDYGQHVVSGTPGRVFDMIRRRVLRT----RNIKMLVLD 55
+N++ HA I GG ++ L HVV TPGR+ D+IR T R IK LV+D
Sbjct: 102 LNLK-HALIVGGMDMIRQSIDLSKRPHVVVATPGRLADLIRSNGEETIAGLRRIKFLVMD 160
Query: 56 EADEMLNKGFKEQIYDVYRYLP 77
EAD +L+ F + + D + LP
Sbjct: 161 EADRLLSPTFADDLDDCFSVLP 182
>WB|WBGene00006888 [details] [associations]
symbol:vbh-1 species:6239 "Caenorhabditis elegans"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0009792 "embryo development ending in birth or
egg hatching" evidence=IMP] [GO:0040010 "positive regulation of
growth rate" evidence=IMP] [GO:0032502 "developmental process"
evidence=IMP] [GO:0040035 "hermaphrodite genitalia development"
evidence=IMP] [GO:0042006 "masculinization of hermaphroditic
germ-line" evidence=IMP] [GO:0042127 "regulation of cell
proliferation" evidence=IMP] [GO:0040020 "regulation of meiosis"
evidence=IMP] [GO:0007281 "germ cell development" evidence=IMP]
[GO:0005737 "cytoplasm" evidence=IDA] [GO:0043186 "P granule"
evidence=IDA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0009792
GO:GO:0040010 GO:GO:0003676 GO:GO:0042127 GO:GO:0040035
GO:GO:0007281 GO:GO:0040020 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 GO:GO:0043186 GeneTree:ENSGT00620000087942
HOGENOM:HOG000268804 KO:K11594 OMA:DELLMEN EMBL:FO081614
GO:GO:0042006 RefSeq:NP_001021793.1 UniGene:Cel.16952
ProteinModelPortal:Q65XX1 SMR:Q65XX1 IntAct:Q65XX1
MINT:MINT-6669731 STRING:Q65XX1 PaxDb:Q65XX1 PRIDE:Q65XX1
EnsemblMetazoa:Y54E10A.9c.1 EnsemblMetazoa:Y54E10A.9c.2
GeneID:171888 KEGG:cel:CELE_Y54E10A.9 UCSC:Y54E10A.9a CTD:171888
WormBase:Y54E10A.9c InParanoid:Q65XX1 NextBio:873115
ArrayExpress:Q65XX1 Uniprot:Q65XX1
Length = 660
Score = 215 (80.7 bits), Expect = 2.3e-28, Sum P(2) = 2.3e-28
Identities = 44/99 (44%), Positives = 62/99 (62%)
Query: 98 SMHGDMPQKERDGIMKEFRSGTSRVLITTDVWARGIDVQQVSLVINYDLPNNRELYIHRI 157
S+HGD+ Q ER+ ++ FRSG +L+ T V ARG+D+ V VINYDLP + + Y+HRI
Sbjct: 427 SIHGDLKQIERERNLELFRSGQCPILVATAVAARGLDIPNVRHVINYDLPGDSDEYVHRI 486
Query: 158 GRSGRFGRKGVAISFVKSDDIRILRDIEQYYSTQIDEMP 196
GR+GR G G+A SF + I RD++ E+P
Sbjct: 487 GRTGRCGNLGIATSFFNDKNRGIGRDLKNLIVESNQEVP 525
Score = 136 (52.9 bits), Expect = 2.3e-28, Sum P(2) = 2.3e-28
Identities = 30/81 (37%), Positives = 46/81 (56%)
Query: 2 NVQCHACIGGT-NLSEDLRKLDYGQHVVSGTPGRVFDMIRRRVLRTRNIKMLVLDEADEM 60
N+Q GG N + + +L G H++ TPGR+ D+I + + + LVLDEAD M
Sbjct: 250 NIQTAILYGGRENYRDQVNRLRAGTHILIATPGRLIDIIEQGFIGLAGCRYLVLDEADRM 309
Query: 61 LNKGFKEQIYDVY-RYLPPAT 80
L+ GF+ QI + + +PP T
Sbjct: 310 LDMGFEPQIRKIVGQGMPPKT 330
Score = 40 (19.1 bits), Expect = 3.3e-07, Sum P(2) = 3.3e-07
Identities = 10/36 (27%), Positives = 20/36 (55%)
Query: 131 RGI--DVQQVSLVINYDLPNNRELYIHRIGRSGRFG 164
RGI D++ + + N ++P ++H++ GR G
Sbjct: 507 RGIGRDLKNLIVESNQEVPE----WLHQVAAEGRIG 538
>UNIPROTKB|F1MYC6 [details] [associations]
symbol:DDX4 "Probable ATP-dependent RNA helicase DDX4"
species:9913 "Bos taurus" [GO:0048471 "perinuclear region of
cytoplasm" evidence=IEA] [GO:0033391 "chromatoid body"
evidence=IEA] [GO:0032880 "regulation of protein localization"
evidence=IEA] [GO:0030317 "sperm motility" evidence=IEA]
[GO:0007283 "spermatogenesis" evidence=IEA] [GO:0007141 "male
meiosis I" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0000237 "leptotene" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0005634 GO:GO:0048471
GO:GO:0032880 GO:GO:0007283 GO:GO:0003676 GO:GO:0030317
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0033391
GO:GO:0007141 GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
GeneTree:ENSGT00620000087942 IPI:IPI00689085 UniGene:Bt.35994
OMA:RDAGESN GO:GO:0000237 EMBL:DAAA02050339 EMBL:DAAA02050337
EMBL:DAAA02050338 EMBL:JX437185 Ensembl:ENSBTAT00000011682
Uniprot:F1MYC6
Length = 729
Score = 220 (82.5 bits), Expect = 2.5e-28, Sum P(2) = 2.5e-28
Identities = 46/123 (37%), Positives = 76/123 (61%)
Query: 81 QVDWLTEKMREANFTVSSMHGDMPQKERDGIMKEFRSGTSRVLITTDVWARGIDVQQVSL 140
+ D++ + + + +S+HGD Q+ER+ + +FR G VL+ T V ARG+D++ V
Sbjct: 554 KADFIATFLCQEKISTTSIHGDREQREREQALGDFRCGKCPVLVATSVAARGLDIENVQH 613
Query: 141 VINYDLPNNRELYIHRIGRSGRFGRKGVAISF--VKSDD------IRILRDIEQYYSTQI 192
VIN+DLP+ + Y+HRIGR+GR G G AISF ++SD +++L D +Q +
Sbjct: 614 VINFDLPSTIDEYVHRIGRTGRCGNTGRAISFFDLESDSQLAQPLVKVLSDAQQDVPAWL 673
Query: 193 DEM 195
+E+
Sbjct: 674 EEI 676
Score = 132 (51.5 bits), Expect = 2.5e-28, Sum P(2) = 2.5e-28
Identities = 25/56 (44%), Positives = 37/56 (66%)
Query: 10 GGTNLSEDLRKLDYGQHVVSGTPGRVFDMIRRRVLRTRNIKMLVLDEADEMLNKGF 65
GGT L +R++ G +++ TPGR+ D+I + + R +K LVLDEAD ML+ GF
Sbjct: 403 GGTQLGHSIRQIVQGCNILCATPGRLMDVIGKEKIGLRQVKYLVLDEADRMLDMGF 458
>UNIPROTKB|Q5W5U4 [details] [associations]
symbol:DDX4 "Probable ATP-dependent RNA helicase DDX4"
species:9913 "Bos taurus" [GO:0033391 "chromatoid body"
evidence=IDA] [GO:0005737 "cytoplasm" evidence=ISS] [GO:0071547
"piP-body" evidence=ISS] [GO:0071546 "pi-body" evidence=ISS]
[GO:0048471 "perinuclear region of cytoplasm" evidence=IEA]
[GO:0007275 "multicellular organismal development" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0007275 GO:GO:0005524
GO:GO:0048471 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0071546 GO:GO:0033391 GO:GO:0008026
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
HOGENOM:HOG000268804 HOVERGEN:HBG015893 EMBL:AF541971
IPI:IPI00689085 RefSeq:NP_001007820.1 UniGene:Bt.35994
ProteinModelPortal:Q5W5U4 SMR:Q5W5U4 STRING:Q5W5U4 PRIDE:Q5W5U4
GeneID:493725 KEGG:bta:493725 CTD:54514 InParanoid:Q5W5U4 KO:K13982
OrthoDB:EOG4W6NVF NextBio:20865468 GO:GO:0071547 Uniprot:Q5W5U4
Length = 729
Score = 220 (82.5 bits), Expect = 2.5e-28, Sum P(2) = 2.5e-28
Identities = 46/123 (37%), Positives = 76/123 (61%)
Query: 81 QVDWLTEKMREANFTVSSMHGDMPQKERDGIMKEFRSGTSRVLITTDVWARGIDVQQVSL 140
+ D++ + + + +S+HGD Q+ER+ + +FR G VL+ T V ARG+D++ V
Sbjct: 554 KADFIATFLCQEKISTTSIHGDREQREREQALGDFRCGKCPVLVATSVAARGLDIENVQH 613
Query: 141 VINYDLPNNRELYIHRIGRSGRFGRKGVAISF--VKSDD------IRILRDIEQYYSTQI 192
VIN+DLP+ + Y+HRIGR+GR G G AISF ++SD +++L D +Q +
Sbjct: 614 VINFDLPSTIDEYVHRIGRTGRCGNTGRAISFFDLESDSQLAQPLVKVLSDAQQDVPAWL 673
Query: 193 DEM 195
+E+
Sbjct: 674 EEI 676
Score = 132 (51.5 bits), Expect = 2.5e-28, Sum P(2) = 2.5e-28
Identities = 25/56 (44%), Positives = 37/56 (66%)
Query: 10 GGTNLSEDLRKLDYGQHVVSGTPGRVFDMIRRRVLRTRNIKMLVLDEADEMLNKGF 65
GGT L +R++ G +++ TPGR+ D+I + + R +K LVLDEAD ML+ GF
Sbjct: 403 GGTQLGHSIRQIVQGCNILCATPGRLMDVIGKEKIGLRQVKYLVLDEADRMLDMGF 458
>UNIPROTKB|P21693 [details] [associations]
symbol:dbpA species:83333 "Escherichia coli K-12"
[GO:0003724 "RNA helicase activity" evidence=IDA] [GO:0016887
"ATPase activity" evidence=IDA] [GO:0033677 "DNA/RNA helicase
activity" evidence=IDA] [GO:0042254 "ribosome biogenesis"
evidence=IEA] [GO:0006200 "ATP catabolic process" evidence=IDA]
[GO:0000027 "ribosomal large subunit assembly" evidence=IMP]
[GO:0034459 "ATP-dependent 3'-5' RNA helicase activity"
evidence=IDA] [GO:0019843 "rRNA binding" evidence=IDA] [GO:0043531
"ADP binding" evidence=IDA] [GO:0005524 "ATP binding"
evidence=IEA;IDA] [GO:0005737 "cytoplasm" evidence=IEA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0005737 EMBL:U00096 EMBL:AP009048
GenomeReviews:AP009048_GR GenomeReviews:U00096_GR GO:GO:0043531
GO:GO:0019843 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0000027 eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
EMBL:X52647 PIR:B64884 RefSeq:NP_415859.1 RefSeq:YP_489613.1
ProteinModelPortal:P21693 SMR:P21693 IntAct:P21693 PRIDE:P21693
EnsemblBacteria:EBESCT00000004879 EnsemblBacteria:EBESCT00000014318
GeneID:12933991 GeneID:947153 KEGG:ecj:Y75_p1320 KEGG:eco:b1343
PATRIC:32117966 EchoBASE:EB0206 EcoGene:EG10210
HOGENOM:HOG000268809 KO:K05591 OMA:HIDPARF ProtClustDB:PRK11776
BioCyc:EcoCyc:EG10210-MONOMER BioCyc:ECOL316407:JW1337-MONOMER
BioCyc:MetaCyc:EG10210-MONOMER Genevestigator:P21693 GO:GO:0034459
GO:GO:0033677 InterPro:IPR005580 Pfam:PF03880 Uniprot:P21693
Length = 457
Score = 214 (80.4 bits), Expect = 2.6e-28, Sum P(2) = 2.6e-28
Identities = 40/103 (38%), Positives = 70/103 (67%)
Query: 87 EKMREANFTVSSMHGDMPQKERDGIMKEFRSGTSRVLITTDVWARGIDVQQVSLVINYDL 146
+ + E + S+HGD+ Q++RD + F +G++RVL+ TDV ARG+D++ + LV+N++L
Sbjct: 259 DALNEVGQSALSLHGDLEQRDRDQTLVRFANGSARVLVATDVAARGLDIKSLELVVNFEL 318
Query: 147 PNNRELYIHRIGRSGRFGRKGVAISFVKSDDIR---ILRDIEQ 186
+ E+++HRIGR+ R G G+AISF ++ + I+ D+ Q
Sbjct: 319 AWDPEVHVHRIGRTARAGNSGLAISFCAPEEAQRANIISDMLQ 361
Score = 130 (50.8 bits), Expect = 2.6e-28, Sum P(2) = 2.6e-28
Identities = 29/96 (30%), Positives = 46/96 (47%)
Query: 2 NVQCHACIGGTNLSEDLRKLDYGQHVVSGTPGRVFDMIRRRVLRTRNIKMLVLDEADEML 61
N + GG L + H++ TPGR+ D +++ + + LV+DEAD ML
Sbjct: 100 NTKILTLCGGQPFGMQRDSLQHAPHIIVATPGRLLDHLQKGTVSLDALNTLVMDEADRML 159
Query: 62 NKGFKEQIYDVYRYLPPATQVDWLTEKMREANFTVS 97
+ GF + I DV R+ P + Q + EA +S
Sbjct: 160 DMGFSDAIDDVIRFAPASRQTLLFSATWPEAIAAIS 195
>UNIPROTKB|Q485I3 [details] [associations]
symbol:dbpA "ATP-dependent RNA helicase DbpA"
species:167879 "Colwellia psychrerythraea 34H" [GO:0008150
"biological_process" evidence=ND] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 EMBL:CP000083 GenomeReviews:CP000083_GR
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
HOGENOM:HOG000268809 KO:K05591 ProtClustDB:PRK11776
InterPro:IPR005580 Pfam:PF03880 RefSeq:YP_268282.1
ProteinModelPortal:Q485I3 STRING:Q485I3 GeneID:3521612
KEGG:cps:CPS_1540 PATRIC:21466289 OMA:THEKSTI
BioCyc:CPSY167879:GI48-1621-MONOMER Uniprot:Q485I3
Length = 468
Score = 206 (77.6 bits), Expect = 2.6e-28, Sum P(2) = 2.6e-28
Identities = 38/104 (36%), Positives = 64/104 (61%)
Query: 94 FTVSSMHGDMPQKERDGIMKEFRSGTSRVLITTDVWARGIDVQQVSLVINYDLPNNRELY 153
F+V ++HGD+ Q++RD + F + ++ +L+ TDV ARG+D+ + LVINY + + E++
Sbjct: 274 FSVLALHGDLEQRDRDQTLLRFANKSASILVATDVAARGLDIDSLDLVINYHIARDSEVH 333
Query: 154 IHRIGRSGRFGRKGVAISFVKSDDIRILRDIEQYYSTQIDEMPM 197
+HRIGR+GR G G+A S + + +E Y I P+
Sbjct: 334 VHRIGRTGRAGSTGIAYSLFSDKESYKVGLLEDYLEAVITPEPL 377
Score = 139 (54.0 bits), Expect = 2.6e-28, Sum P(2) = 2.6e-28
Identities = 27/76 (35%), Positives = 44/76 (57%)
Query: 2 NVQCHACIGGTNLSEDLRKLDYGQHVVSGTPGRVFDMIRRRVLRTRNIKMLVLDEADEML 61
N++ GGT + L++G HV+ GTPGR+ + + + L+ N+ +LVLDEAD ML
Sbjct: 107 NIKILTLCGGTPFGPQIGSLEHGAHVIVGTPGRLEEHVIKGTLQLDNLNLLVLDEADRML 166
Query: 62 NKGFKEQIYDVYRYLP 77
GF+ + ++ P
Sbjct: 167 EMGFQAALDNIVGRTP 182
>TIGR_CMR|CPS_1540 [details] [associations]
symbol:CPS_1540 "ATP-dependent RNA helicase DbpA"
species:167879 "Colwellia psychrerythraea 34H" [GO:0004004
"ATP-dependent RNA helicase activity" evidence=ISS] [GO:0008150
"biological_process" evidence=ND] [GO:0008186 "RNA-dependent ATPase
activity" evidence=ISS] [GO:0019843 "rRNA binding" evidence=ISS]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0003676 EMBL:CP000083
GenomeReviews:CP000083_GR InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 HOGENOM:HOG000268809 KO:K05591 ProtClustDB:PRK11776
InterPro:IPR005580 Pfam:PF03880 RefSeq:YP_268282.1
ProteinModelPortal:Q485I3 STRING:Q485I3 GeneID:3521612
KEGG:cps:CPS_1540 PATRIC:21466289 OMA:THEKSTI
BioCyc:CPSY167879:GI48-1621-MONOMER Uniprot:Q485I3
Length = 468
Score = 206 (77.6 bits), Expect = 2.6e-28, Sum P(2) = 2.6e-28
Identities = 38/104 (36%), Positives = 64/104 (61%)
Query: 94 FTVSSMHGDMPQKERDGIMKEFRSGTSRVLITTDVWARGIDVQQVSLVINYDLPNNRELY 153
F+V ++HGD+ Q++RD + F + ++ +L+ TDV ARG+D+ + LVINY + + E++
Sbjct: 274 FSVLALHGDLEQRDRDQTLLRFANKSASILVATDVAARGLDIDSLDLVINYHIARDSEVH 333
Query: 154 IHRIGRSGRFGRKGVAISFVKSDDIRILRDIEQYYSTQIDEMPM 197
+HRIGR+GR G G+A S + + +E Y I P+
Sbjct: 334 VHRIGRTGRAGSTGIAYSLFSDKESYKVGLLEDYLEAVITPEPL 377
Score = 139 (54.0 bits), Expect = 2.6e-28, Sum P(2) = 2.6e-28
Identities = 27/76 (35%), Positives = 44/76 (57%)
Query: 2 NVQCHACIGGTNLSEDLRKLDYGQHVVSGTPGRVFDMIRRRVLRTRNIKMLVLDEADEML 61
N++ GGT + L++G HV+ GTPGR+ + + + L+ N+ +LVLDEAD ML
Sbjct: 107 NIKILTLCGGTPFGPQIGSLEHGAHVIVGTPGRLEEHVIKGTLQLDNLNLLVLDEADRML 166
Query: 62 NKGFKEQIYDVYRYLP 77
GF+ + ++ P
Sbjct: 167 EMGFQAALDNIVGRTP 182
>UNIPROTKB|A3KN07 [details] [associations]
symbol:DDX41 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0003677 "DNA binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0071013 "catalytic step 2 spliceosome" evidence=IEA]
[GO:0051607 "defense response to virus" evidence=IEA] [GO:0045944
"positive regulation of transcription from RNA polymerase II
promoter" evidence=IEA] [GO:0035458 "cellular response to
interferon-beta" evidence=IEA] [GO:0005783 "endoplasmic reticulum"
evidence=IEA] InterPro:IPR001650 InterPro:IPR001878
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS51194
SMART:SM00343 SMART:SM00490 GO:GO:0005783 GO:GO:0005524
GO:GO:0003677 GO:GO:0008270 GO:GO:0045944 GO:GO:0051607
GO:GO:0035458 GO:GO:0071013 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 GeneTree:ENSGT00620000087942 HOVERGEN:HBG015893
KO:K13116 OMA:KDQEERS CTD:51428 HOGENOM:HOG000268792
OrthoDB:EOG4CVG6K EMBL:DAAA02020056 EMBL:BC133465 IPI:IPI00840518
RefSeq:NP_001076071.1 UniGene:Bt.5258 SMR:A3KN07
Ensembl:ENSBTAT00000043510 GeneID:505276 KEGG:bta:505276
InParanoid:A3KN07 NextBio:20867058 Uniprot:A3KN07
Length = 622
Score = 200 (75.5 bits), Expect = 2.7e-28, Sum P(2) = 2.7e-28
Identities = 41/105 (39%), Positives = 63/105 (60%)
Query: 82 VDWLTEKMREANFTVSSMHGDMPQKERDGIMKEFRSGTSRVLITTDVWARGIDVQQVSLV 141
VD + E + ++HG Q+ER ++ FR G VL+ TDV ++G+D + V
Sbjct: 445 VDAIHEYLLLKGVEAVAIHGGKDQEERTKAIEAFREGKKDVLVATDVASKGLDFPAIQHV 504
Query: 142 INYDLPNNRELYIHRIGRSGRFGRKGVAISFV-KSDDIRILRDIE 185
INYD+P E Y+HRIGR+GR G G+A +F+ K+ D +L D++
Sbjct: 505 INYDMPEEIENYVHRIGRTGRSGNTGIATTFINKACDESVLMDLK 549
Score = 150 (57.9 bits), Expect = 2.7e-28, Sum P(2) = 2.7e-28
Identities = 29/99 (29%), Positives = 56/99 (56%)
Query: 3 VQCHACIGGTNLSEDLRKLDYGQHVVSGTPGRVFDMIRRRVLRTRNIKMLVLDEADEMLN 62
++C CIGG ++ E + + +G H++ TPGR+ D+++++++ + L LDEAD M++
Sbjct: 292 LRCALCIGGMSVKEQMETIRHGVHMMVATPGRLMDLLQKKMVSLDICRYLALDEADRMID 351
Query: 63 KGFKEQIYDVYRYLPPATQVDWLTEKMREA--NFTVSSM 99
GF+ I ++ Y Q + M + NF S++
Sbjct: 352 MGFEGDIRTIFSYFKGQRQTLLFSATMPKKIQNFAKSAL 390
>UNIPROTKB|E2R052 [details] [associations]
symbol:DDX41 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0071013 "catalytic step 2 spliceosome"
evidence=IEA] [GO:0051607 "defense response to virus" evidence=IEA]
[GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0035458 "cellular
response to interferon-beta" evidence=IEA] [GO:0005783 "endoplasmic
reticulum" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] InterPro:IPR001650 InterPro:IPR001878
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS51194
SMART:SM00343 SMART:SM00490 GO:GO:0005783 GO:GO:0005524
GO:GO:0003677 GO:GO:0008270 GO:GO:0045944 GO:GO:0051607
GO:GO:0035458 GO:GO:0071013 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
GeneTree:ENSGT00620000087942 KO:K13116 CTD:51428 EMBL:AAEX03002959
RefSeq:XP_536417.2 ProteinModelPortal:E2R052
Ensembl:ENSCAFT00000025858 GeneID:479274 KEGG:cfa:479274
NextBio:20854482 Uniprot:E2R052
Length = 622
Score = 200 (75.5 bits), Expect = 2.7e-28, Sum P(2) = 2.7e-28
Identities = 41/105 (39%), Positives = 63/105 (60%)
Query: 82 VDWLTEKMREANFTVSSMHGDMPQKERDGIMKEFRSGTSRVLITTDVWARGIDVQQVSLV 141
VD + E + ++HG Q+ER ++ FR G VL+ TDV ++G+D + V
Sbjct: 445 VDAIHEYLLLKGVEAVAIHGGKDQEERTKAIEAFREGKKDVLVATDVASKGLDFPAIQHV 504
Query: 142 INYDLPNNRELYIHRIGRSGRFGRKGVAISFV-KSDDIRILRDIE 185
INYD+P E Y+HRIGR+GR G G+A +F+ K+ D +L D++
Sbjct: 505 INYDMPEEIENYVHRIGRTGRSGNTGIATTFINKACDESVLMDLK 549
Score = 150 (57.9 bits), Expect = 2.7e-28, Sum P(2) = 2.7e-28
Identities = 29/99 (29%), Positives = 56/99 (56%)
Query: 3 VQCHACIGGTNLSEDLRKLDYGQHVVSGTPGRVFDMIRRRVLRTRNIKMLVLDEADEMLN 62
++C CIGG ++ E + + +G H++ TPGR+ D+++++++ + L LDEAD M++
Sbjct: 292 LRCALCIGGMSVKEQMETIRHGVHMMVATPGRLMDLLQKKMVSLDICRYLALDEADRMID 351
Query: 63 KGFKEQIYDVYRYLPPATQVDWLTEKMREA--NFTVSSM 99
GF+ I ++ Y Q + M + NF S++
Sbjct: 352 MGFEGDIRTIFSYFKGQRQTLLFSATMPKKIQNFAKSAL 390
>UNIPROTKB|Q9UJV9 [details] [associations]
symbol:DDX41 "Probable ATP-dependent RNA helicase DDX41"
species:9606 "Homo sapiens" [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
[GO:0005783 "endoplasmic reticulum" evidence=IEA] [GO:0035458
"cellular response to interferon-beta" evidence=IEA] [GO:0045944
"positive regulation of transcription from RNA polymerase II
promoter" evidence=IEA] [GO:0051607 "defense response to virus"
evidence=IEA] [GO:0000398 "mRNA splicing, via spliceosome"
evidence=IC] [GO:0071013 "catalytic step 2 spliceosome"
evidence=IDA] [GO:0007275 "multicellular organismal development"
evidence=TAS] [GO:0006396 "RNA processing" evidence=TAS]
[GO:0006915 "apoptotic process" evidence=TAS] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005730 "nucleolus" evidence=IDA]
InterPro:IPR001650 InterPro:IPR001878 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS50158
PROSITE:PS51194 SMART:SM00343 SMART:SM00490 GO:GO:0005783
GO:GO:0007275 GO:GO:0005524 GO:GO:0006915 GO:GO:0046872
GO:GO:0003677 GO:GO:0008270 GO:GO:0045944 GO:GO:0051607
GO:GO:0003723 GO:GO:0035458 GO:GO:0000398 GO:GO:0071013
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 EMBL:CH471195
GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
HOVERGEN:HBG015893 KO:K13116 EMBL:AF195417 EMBL:AK001255
EMBL:AK027768 EMBL:AK315491 EMBL:BC015476 EMBL:AL137455
EMBL:BX641072 IPI:IPI00007208 PIR:T46269 RefSeq:NP_057306.2
UniGene:Hs.484288 PDB:2P6N PDBsum:2P6N ProteinModelPortal:Q9UJV9
SMR:Q9UJV9 IntAct:Q9UJV9 MINT:MINT-3081244 STRING:Q9UJV9
PhosphoSite:Q9UJV9 DMDM:20532370 PaxDb:Q9UJV9 PeptideAtlas:Q9UJV9
PRIDE:Q9UJV9 DNASU:51428 Ensembl:ENST00000507955 GeneID:51428
KEGG:hsa:51428 UCSC:uc003mhn.3 CTD:51428 GeneCards:GC05M176938
HGNC:HGNC:18674 HPA:HPA017911 MIM:608170 neXtProt:NX_Q9UJV9
PharmGKB:PA134908862 HOGENOM:HOG000268792 InParanoid:Q9UJV9
OrthoDB:EOG4CVG6K PhylomeDB:Q9UJV9 ChiTaRS:DDX41
EvolutionaryTrace:Q9UJV9 GenomeRNAi:51428 NextBio:54987
ArrayExpress:Q9UJV9 Bgee:Q9UJV9 CleanEx:HS_DDX41
Genevestigator:Q9UJV9 GermOnline:ENSG00000183258 Uniprot:Q9UJV9
Length = 622
Score = 200 (75.5 bits), Expect = 2.7e-28, Sum P(2) = 2.7e-28
Identities = 41/105 (39%), Positives = 63/105 (60%)
Query: 82 VDWLTEKMREANFTVSSMHGDMPQKERDGIMKEFRSGTSRVLITTDVWARGIDVQQVSLV 141
VD + E + ++HG Q+ER ++ FR G VL+ TDV ++G+D + V
Sbjct: 445 VDAIHEYLLLKGVEAVAIHGGKDQEERTKAIEAFREGKKDVLVATDVASKGLDFPAIQHV 504
Query: 142 INYDLPNNRELYIHRIGRSGRFGRKGVAISFV-KSDDIRILRDIE 185
INYD+P E Y+HRIGR+GR G G+A +F+ K+ D +L D++
Sbjct: 505 INYDMPEEIENYVHRIGRTGRSGNTGIATTFINKACDESVLMDLK 549
Score = 150 (57.9 bits), Expect = 2.7e-28, Sum P(2) = 2.7e-28
Identities = 29/99 (29%), Positives = 56/99 (56%)
Query: 3 VQCHACIGGTNLSEDLRKLDYGQHVVSGTPGRVFDMIRRRVLRTRNIKMLVLDEADEMLN 62
++C CIGG ++ E + + +G H++ TPGR+ D+++++++ + L LDEAD M++
Sbjct: 292 LRCALCIGGMSVKEQMETIRHGVHMMVATPGRLMDLLQKKMVSLDICRYLALDEADRMID 351
Query: 63 KGFKEQIYDVYRYLPPATQVDWLTEKMREA--NFTVSSM 99
GF+ I ++ Y Q + M + NF S++
Sbjct: 352 MGFEGDIRTIFSYFKGQRQTLLFSATMPKKIQNFAKSAL 390
>MGI|MGI:1920185 [details] [associations]
symbol:Ddx41 "DEAD (Asp-Glu-Ala-Asp) box polypeptide 41"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IDA] [GO:0003723 "RNA binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IDA]
[GO:0005681 "spliceosomal complex" evidence=IEA] [GO:0005783
"endoplasmic reticulum" evidence=IDA] [GO:0006397 "mRNA processing"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0008380 "RNA splicing" evidence=IEA] [GO:0016787 "hydrolase
activity" evidence=IEA] [GO:0035458 "cellular response to
interferon-beta" evidence=IMP] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=IDA]
[GO:0046872 "metal ion binding" evidence=IEA] [GO:0051607 "defense
response to virus" evidence=IMP] [GO:0071013 "catalytic step 2
spliceosome" evidence=ISO] InterPro:IPR001650 InterPro:IPR001878
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS50158 PROSITE:PS51194 SMART:SM00343 SMART:SM00490
MGI:MGI:1920185 GO:GO:0005783 GO:GO:0005524 GO:GO:0005634
GO:GO:0008380 GO:GO:0046872 GO:GO:0003677 GO:GO:0008270
GO:GO:0006397 GO:GO:0045944 GO:GO:0051607 GO:GO:0003723
GO:GO:0035458 GO:GO:0071013 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 GeneTree:ENSGT00620000087942 HOVERGEN:HBG015893
KO:K13116 OMA:KDQEERS CTD:51428 HOGENOM:HOG000268792
OrthoDB:EOG4CVG6K EMBL:AK156957 EMBL:BC011308 IPI:IPI00127071
RefSeq:NP_598820.2 UniGene:Mm.205045 ProteinModelPortal:Q91VN6
SMR:Q91VN6 IntAct:Q91VN6 STRING:Q91VN6 PhosphoSite:Q91VN6
PaxDb:Q91VN6 PRIDE:Q91VN6 Ensembl:ENSMUST00000021956 GeneID:72935
KEGG:mmu:72935 InParanoid:Q3U0E0 NextBio:337171 Bgee:Q91VN6
CleanEx:MM_DDX41 Genevestigator:Q91VN6
GermOnline:ENSMUSG00000021494 Uniprot:Q91VN6
Length = 622
Score = 200 (75.5 bits), Expect = 2.7e-28, Sum P(2) = 2.7e-28
Identities = 41/105 (39%), Positives = 63/105 (60%)
Query: 82 VDWLTEKMREANFTVSSMHGDMPQKERDGIMKEFRSGTSRVLITTDVWARGIDVQQVSLV 141
VD + E + ++HG Q+ER ++ FR G VL+ TDV ++G+D + V
Sbjct: 445 VDAIHEYLLLKGVEAVAIHGGKDQEERTKAIEAFREGKKDVLVATDVASKGLDFPAIQHV 504
Query: 142 INYDLPNNRELYIHRIGRSGRFGRKGVAISFV-KSDDIRILRDIE 185
INYD+P E Y+HRIGR+GR G G+A +F+ K+ D +L D++
Sbjct: 505 INYDMPEEIENYVHRIGRTGRSGNTGIATTFINKACDESVLMDLK 549
Score = 150 (57.9 bits), Expect = 2.7e-28, Sum P(2) = 2.7e-28
Identities = 29/99 (29%), Positives = 56/99 (56%)
Query: 3 VQCHACIGGTNLSEDLRKLDYGQHVVSGTPGRVFDMIRRRVLRTRNIKMLVLDEADEMLN 62
++C CIGG ++ E + + +G H++ TPGR+ D+++++++ + L LDEAD M++
Sbjct: 292 LRCALCIGGMSVKEQMETIRHGVHMMVATPGRLMDLLQKKMVSLDICRYLALDEADRMID 351
Query: 63 KGFKEQIYDVYRYLPPATQVDWLTEKMREA--NFTVSSM 99
GF+ I ++ Y Q + M + NF S++
Sbjct: 352 MGFEGDIRTIFSYFKGQRQTLLFSATMPKKIQNFAKSAL 390
>RGD|1311758 [details] [associations]
symbol:Ddx41 "DEAD (Asp-Glu-Ala-Asp) box polypeptide 41"
species:10116 "Rattus norvegicus" [GO:0003677 "DNA binding"
evidence=IEA;ISO] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISO] [GO:0005783 "endoplasmic
reticulum" evidence=IEA;ISO] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0035458 "cellular response to interferon-beta"
evidence=IEA;ISO] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=IEA;ISO] [GO:0051607
"defense response to virus" evidence=IEA;ISO] [GO:0071013
"catalytic step 2 spliceosome" evidence=IEA;ISO] [GO:0005730
"nucleolus" evidence=ISO] InterPro:IPR001650 InterPro:IPR001878
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS51194
SMART:SM00343 SMART:SM00490 RGD:1311758 GO:GO:0005783 GO:GO:0005524
GO:GO:0003677 GO:GO:0008270 GO:GO:0045944 GO:GO:0051607
GO:GO:0035458 GO:GO:0071013 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 EMBL:CH474032 eggNOG:COG0513
InterPro:IPR014014 PROSITE:PS51195 GeneTree:ENSGT00620000087942
HOVERGEN:HBG015893 KO:K13116 CTD:51428 HOGENOM:HOG000268792
OrthoDB:EOG4CVG6K EMBL:BC166825 IPI:IPI00565869
RefSeq:NP_001101516.1 UniGene:Rn.114971 SMR:B2RYL8
Ensembl:ENSRNOT00000018114 GeneID:314336 KEGG:rno:314336
UCSC:RGD:1311758 NextBio:667511 Genevestigator:B2RYL8
Uniprot:B2RYL8
Length = 622
Score = 200 (75.5 bits), Expect = 2.7e-28, Sum P(2) = 2.7e-28
Identities = 41/105 (39%), Positives = 63/105 (60%)
Query: 82 VDWLTEKMREANFTVSSMHGDMPQKERDGIMKEFRSGTSRVLITTDVWARGIDVQQVSLV 141
VD + E + ++HG Q+ER ++ FR G VL+ TDV ++G+D + V
Sbjct: 445 VDAIHEYLLLKGVEAVAIHGGKDQEERTKAIEAFREGKKDVLVATDVASKGLDFPAIQHV 504
Query: 142 INYDLPNNRELYIHRIGRSGRFGRKGVAISFV-KSDDIRILRDIE 185
INYD+P E Y+HRIGR+GR G G+A +F+ K+ D +L D++
Sbjct: 505 INYDMPEEIENYVHRIGRTGRSGNTGIATTFINKACDESVLMDLK 549
Score = 150 (57.9 bits), Expect = 2.7e-28, Sum P(2) = 2.7e-28
Identities = 29/99 (29%), Positives = 56/99 (56%)
Query: 3 VQCHACIGGTNLSEDLRKLDYGQHVVSGTPGRVFDMIRRRVLRTRNIKMLVLDEADEMLN 62
++C CIGG ++ E + + +G H++ TPGR+ D+++++++ + L LDEAD M++
Sbjct: 292 LRCALCIGGMSVKEQMETIRHGVHMMVATPGRLMDLLQKKMVSLDICRYLALDEADRMID 351
Query: 63 KGFKEQIYDVYRYLPPATQVDWLTEKMREA--NFTVSSM 99
GF+ I ++ Y Q + M + NF S++
Sbjct: 352 MGFEGDIRTIFSYFKGQRQTLLFSATMPKKIQNFAKSAL 390
>UNIPROTKB|Q8EE19 [details] [associations]
symbol:SO_2571 "ATP-dependent RNA helicase DEAD box family"
species:211586 "Shewanella oneidensis MR-1" [GO:0008150
"biological_process" evidence=ND] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 EMBL:AE014299 GenomeReviews:AE014299_GR
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 HSSP:Q58083 OMA:FRNLCAI
HOGENOM:HOG000268807 RefSeq:NP_718157.1 ProteinModelPortal:Q8EE19
GeneID:1170275 KEGG:son:SO_2571 PATRIC:23524769
ProtClustDB:CLSK906777 Uniprot:Q8EE19
Length = 475
Score = 209 (78.6 bits), Expect = 2.7e-28, Sum P(2) = 2.7e-28
Identities = 44/115 (38%), Positives = 65/115 (56%)
Query: 85 LTEKMREANFTVSSMHGDMPQKERDGIMKEFRSGTSRVLITTDVWARGIDVQQVSLVINY 144
L ++ + + H Q R+ ++ +F++G L+ T V +RGID+ + VINY
Sbjct: 259 LVSQLEKRGIVAEAFHSGRSQAIREQLLIDFKAGKVPFLVATGVVSRGIDIDALERVINY 318
Query: 145 DLPNNRELYIHRIGRSGRFGRKGVAISFVKSDDIRILRDIEQYYSTQIDEMPMNG 199
DLP+ + YIHRIGR+GR G +G AISFV DD R L IE+ I+ + G
Sbjct: 319 DLPDEADDYIHRIGRTGRAGNQGEAISFVSKDDFRNLCAIERRLGHIIERKNIEG 373
Score = 136 (52.9 bits), Expect = 2.7e-28, Sum P(2) = 2.7e-28
Identities = 29/75 (38%), Positives = 43/75 (57%)
Query: 7 ACIGGTNLSEDLRKLDYGQHVVSGTPGRVFDMIRRRVLRTRNIKMLVLDEADEMLNKGFK 66
A GG + + ++L G ++ TPGR+ DM +R +R + +LVLDEAD ML+ GF
Sbjct: 106 AMYGGVDAAPQKKRLIEGVDLLVATPGRLLDMYTQRAIRFDEVSVLVLDEADRMLDMGFI 165
Query: 67 EQIYDVYRYLPPATQ 81
E I ++ LP Q
Sbjct: 166 EDINNIIEKLPEQRQ 180
>TIGR_CMR|SO_2571 [details] [associations]
symbol:SO_2571 "ATP-dependent RNA helicase, DEAD box
family" species:211586 "Shewanella oneidensis MR-1" [GO:0008150
"biological_process" evidence=ND] [GO:0008026 "ATP-dependent
helicase activity" evidence=ISS] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 EMBL:AE014299 GenomeReviews:AE014299_GR
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 HSSP:Q58083 OMA:FRNLCAI
HOGENOM:HOG000268807 RefSeq:NP_718157.1 ProteinModelPortal:Q8EE19
GeneID:1170275 KEGG:son:SO_2571 PATRIC:23524769
ProtClustDB:CLSK906777 Uniprot:Q8EE19
Length = 475
Score = 209 (78.6 bits), Expect = 2.7e-28, Sum P(2) = 2.7e-28
Identities = 44/115 (38%), Positives = 65/115 (56%)
Query: 85 LTEKMREANFTVSSMHGDMPQKERDGIMKEFRSGTSRVLITTDVWARGIDVQQVSLVINY 144
L ++ + + H Q R+ ++ +F++G L+ T V +RGID+ + VINY
Sbjct: 259 LVSQLEKRGIVAEAFHSGRSQAIREQLLIDFKAGKVPFLVATGVVSRGIDIDALERVINY 318
Query: 145 DLPNNRELYIHRIGRSGRFGRKGVAISFVKSDDIRILRDIEQYYSTQIDEMPMNG 199
DLP+ + YIHRIGR+GR G +G AISFV DD R L IE+ I+ + G
Sbjct: 319 DLPDEADDYIHRIGRTGRAGNQGEAISFVSKDDFRNLCAIERRLGHIIERKNIEG 373
Score = 136 (52.9 bits), Expect = 2.7e-28, Sum P(2) = 2.7e-28
Identities = 29/75 (38%), Positives = 43/75 (57%)
Query: 7 ACIGGTNLSEDLRKLDYGQHVVSGTPGRVFDMIRRRVLRTRNIKMLVLDEADEMLNKGFK 66
A GG + + ++L G ++ TPGR+ DM +R +R + +LVLDEAD ML+ GF
Sbjct: 106 AMYGGVDAAPQKKRLIEGVDLLVATPGRLLDMYTQRAIRFDEVSVLVLDEADRMLDMGFI 165
Query: 67 EQIYDVYRYLPPATQ 81
E I ++ LP Q
Sbjct: 166 EDINNIIEKLPEQRQ 180
>UNIPROTKB|J3KNN5 [details] [associations]
symbol:DDX41 "Probable ATP-dependent RNA helicase DDX41"
species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR001878 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS51194 SMART:SM00343 SMART:SM00490 GO:GO:0005524
GO:GO:0008270 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
OMA:KDQEERS HGNC:HGNC:18674 ChiTaRS:DDX41 EMBL:AC145098
Ensembl:ENST00000330503 Uniprot:J3KNN5
Length = 640
Score = 200 (75.5 bits), Expect = 3.0e-28, Sum P(2) = 3.0e-28
Identities = 41/105 (39%), Positives = 63/105 (60%)
Query: 82 VDWLTEKMREANFTVSSMHGDMPQKERDGIMKEFRSGTSRVLITTDVWARGIDVQQVSLV 141
VD + E + ++HG Q+ER ++ FR G VL+ TDV ++G+D + V
Sbjct: 463 VDAIHEYLLLKGVEAVAIHGGKDQEERTKAIEAFREGKKDVLVATDVASKGLDFPAIQHV 522
Query: 142 INYDLPNNRELYIHRIGRSGRFGRKGVAISFV-KSDDIRILRDIE 185
INYD+P E Y+HRIGR+GR G G+A +F+ K+ D +L D++
Sbjct: 523 INYDMPEEIENYVHRIGRTGRSGNTGIATTFINKACDESVLMDLK 567
Score = 150 (57.9 bits), Expect = 3.0e-28, Sum P(2) = 3.0e-28
Identities = 29/99 (29%), Positives = 56/99 (56%)
Query: 3 VQCHACIGGTNLSEDLRKLDYGQHVVSGTPGRVFDMIRRRVLRTRNIKMLVLDEADEMLN 62
++C CIGG ++ E + + +G H++ TPGR+ D+++++++ + L LDEAD M++
Sbjct: 310 LRCALCIGGMSVKEQMETIRHGVHMMVATPGRLMDLLQKKMVSLDICRYLALDEADRMID 369
Query: 63 KGFKEQIYDVYRYLPPATQVDWLTEKMREA--NFTVSSM 99
GF+ I ++ Y Q + M + NF S++
Sbjct: 370 MGFEGDIRTIFSYFKGQRQTLLFSATMPKKIQNFAKSAL 408
>UNIPROTKB|Q4R5S7 [details] [associations]
symbol:DDX4 "Probable ATP-dependent RNA helicase DDX4"
species:9541 "Macaca fascicularis" [GO:0005737 "cytoplasm"
evidence=ISS] [GO:0071546 "pi-body" evidence=ISS] [GO:0071547
"piP-body" evidence=ISS] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0007275 GO:GO:0005524
GO:GO:0048471 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0071546 GO:GO:0008026 InterPro:IPR014014
PROSITE:PS51195 HOVERGEN:HBG015893 GO:GO:0071547 EMBL:AB169466
ProteinModelPortal:Q4R5S7 SMR:Q4R5S7 Uniprot:Q4R5S7
Length = 725
Score = 221 (82.9 bits), Expect = 3.1e-28, Sum P(2) = 3.1e-28
Identities = 46/123 (37%), Positives = 77/123 (62%)
Query: 81 QVDWLTEKMREANFTVSSMHGDMPQKERDGIMKEFRSGTSRVLITTDVWARGIDVQQVSL 140
+ D++ + + + +S+HGD Q+ER+ + +FR G VL+ T V ARG+D++ V
Sbjct: 553 KADFIATFLCQEKISTTSIHGDREQREREQALGDFRCGKCPVLVATSVAARGLDIENVQH 612
Query: 141 VINYDLPNNRELYIHRIGRSGRFGRKGVAISF--VKSDD------IRILRDIEQYYSTQI 192
VIN+DLP+ + Y+HRIGR+GR G G AISF ++SD+ +++L D +Q +
Sbjct: 613 VINFDLPSTIDEYVHRIGRTGRCGNTGRAISFFDLESDNHLAQPLVKVLTDAQQDVPAWL 672
Query: 193 DEM 195
+E+
Sbjct: 673 EEI 675
Score = 130 (50.8 bits), Expect = 3.1e-28, Sum P(2) = 3.1e-28
Identities = 25/56 (44%), Positives = 37/56 (66%)
Query: 10 GGTNLSEDLRKLDYGQHVVSGTPGRVFDMIRRRVLRTRNIKMLVLDEADEMLNKGF 65
GGT L +R++ G +++ TPGR+ D+I + + + IK LVLDEAD ML+ GF
Sbjct: 402 GGTQLGHSIRQIVQGCNILCATPGRLMDIIGKEKIGLKQIKYLVLDEADRMLDMGF 457
>UNIPROTKB|J9NZF6 [details] [associations]
symbol:DDX41 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR001878 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS51194 SMART:SM00343 SMART:SM00490 GO:GO:0005524
GO:GO:0008270 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
GeneTree:ENSGT00620000087942 OMA:KDQEERS EMBL:AAEX03002959
Ensembl:ENSCAFT00000042923 Uniprot:J9NZF6
Length = 649
Score = 200 (75.5 bits), Expect = 3.1e-28, Sum P(2) = 3.1e-28
Identities = 41/105 (39%), Positives = 63/105 (60%)
Query: 82 VDWLTEKMREANFTVSSMHGDMPQKERDGIMKEFRSGTSRVLITTDVWARGIDVQQVSLV 141
VD + E + ++HG Q+ER ++ FR G VL+ TDV ++G+D + V
Sbjct: 472 VDAIHEYLLLKGVEAVAIHGGKDQEERTKAIEAFREGKKDVLVATDVASKGLDFPAIQHV 531
Query: 142 INYDLPNNRELYIHRIGRSGRFGRKGVAISFV-KSDDIRILRDIE 185
INYD+P E Y+HRIGR+GR G G+A +F+ K+ D +L D++
Sbjct: 532 INYDMPEEIENYVHRIGRTGRSGNTGIATTFINKACDESVLMDLK 576
Score = 150 (57.9 bits), Expect = 3.1e-28, Sum P(2) = 3.1e-28
Identities = 29/99 (29%), Positives = 56/99 (56%)
Query: 3 VQCHACIGGTNLSEDLRKLDYGQHVVSGTPGRVFDMIRRRVLRTRNIKMLVLDEADEMLN 62
++C CIGG ++ E + + +G H++ TPGR+ D+++++++ + L LDEAD M++
Sbjct: 319 LRCALCIGGMSVKEQMETIRHGVHMMVATPGRLMDLLQKKMVSLDICRYLALDEADRMID 378
Query: 63 KGFKEQIYDVYRYLPPATQVDWLTEKMREA--NFTVSSM 99
GF+ I ++ Y Q + M + NF S++
Sbjct: 379 MGFEGDIRTIFSYFKGQRQTLLFSATMPKKIQNFAKSAL 417
>UNIPROTKB|D6RDK4 [details] [associations]
symbol:DDX4 "Probable ATP-dependent RNA helicase DDX4"
species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014
PROSITE:PS51195 CTD:54514 KO:K13982 RefSeq:NP_001160005.1
UniGene:Hs.223581 GeneID:54514 KEGG:hsa:54514 HGNC:HGNC:18700
GenomeRNAi:54514 NextBio:56900 EMBL:AC016632 IPI:IPI00953956
ProteinModelPortal:D6RDK4 SMR:D6RDK4 PRIDE:D6RDK4
Ensembl:ENST00000514278 UCSC:uc010ivz.3 ArrayExpress:D6RDK4
Bgee:D6RDK4 Uniprot:D6RDK4
Length = 704
Score = 220 (82.5 bits), Expect = 3.6e-28, Sum P(2) = 3.6e-28
Identities = 46/123 (37%), Positives = 77/123 (62%)
Query: 81 QVDWLTEKMREANFTVSSMHGDMPQKERDGIMKEFRSGTSRVLITTDVWARGIDVQQVSL 140
+ D++ + + + +S+HGD Q+ER+ + +FR G VL+ T V ARG+D++ V
Sbjct: 532 KADFIATFLCQEKISTTSIHGDREQREREQALGDFRFGKCPVLVATSVAARGLDIENVQH 591
Query: 141 VINYDLPNNRELYIHRIGRSGRFGRKGVAISF--VKSDD------IRILRDIEQYYSTQI 192
VIN+DLP+ + Y+HRIGR+GR G G AISF ++SD+ +++L D +Q +
Sbjct: 592 VINFDLPSTIDEYVHRIGRTGRCGNTGRAISFFDLESDNHLAQPLVKVLTDAQQDVPAWL 651
Query: 193 DEM 195
+E+
Sbjct: 652 EEI 654
Score = 130 (50.8 bits), Expect = 3.6e-28, Sum P(2) = 3.6e-28
Identities = 25/56 (44%), Positives = 37/56 (66%)
Query: 10 GGTNLSEDLRKLDYGQHVVSGTPGRVFDMIRRRVLRTRNIKMLVLDEADEMLNKGF 65
GGT L +R++ G +++ TPGR+ D+I + + + IK LVLDEAD ML+ GF
Sbjct: 381 GGTQLGHSIRQIVQGCNILCATPGRLMDIIGKEKIGLKQIKYLVLDEADRMLDMGF 436
>UNIPROTKB|Q6GWX0 [details] [associations]
symbol:DDX4 "Probable ATP-dependent RNA helicase DDX4"
species:9823 "Sus scrofa" [GO:0033391 "chromatoid body"
evidence=IDA] [GO:0005737 "cytoplasm" evidence=ISS] [GO:0071547
"piP-body" evidence=ISS] [GO:0071546 "pi-body" evidence=ISS]
[GO:0048471 "perinuclear region of cytoplasm" evidence=IEA]
[GO:0007275 "multicellular organismal development" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0007275 GO:GO:0005524
GO:GO:0048471 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0071546 GO:GO:0033391 GO:GO:0008026
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
HOVERGEN:HBG015893 CTD:54514 KO:K13982 OrthoDB:EOG4W6NVF
GO:GO:0071547 EMBL:AY626785 RefSeq:NP_001001910.1 UniGene:Ssc.42782
ProteinModelPortal:Q6GWX0 SMR:Q6GWX0 STRING:Q6GWX0 GeneID:431672
KEGG:ssc:431672 Uniprot:Q6GWX0
Length = 722
Score = 220 (82.5 bits), Expect = 3.9e-28, Sum P(2) = 3.9e-28
Identities = 46/123 (37%), Positives = 77/123 (62%)
Query: 81 QVDWLTEKMREANFTVSSMHGDMPQKERDGIMKEFRSGTSRVLITTDVWARGIDVQQVSL 140
+ D++ + + + +S+HGD Q+ER+ + +FR G VL+ T V ARG+D++ V
Sbjct: 550 KADFIATFLCQEKISTTSIHGDREQREREQALGDFRFGKCPVLVATSVAARGLDIENVQH 609
Query: 141 VINYDLPNNRELYIHRIGRSGRFGRKGVAISF--VKSDD------IRILRDIEQYYSTQI 192
VIN+DLP+ + Y+HRIGR+GR G G AISF ++SD+ +++L D +Q +
Sbjct: 610 VINFDLPSTIDEYVHRIGRTGRCGNTGRAISFFDLESDNHLAQPLVKVLTDAQQDVPAWL 669
Query: 193 DEM 195
+E+
Sbjct: 670 EEI 672
Score = 130 (50.8 bits), Expect = 3.9e-28, Sum P(2) = 3.9e-28
Identities = 25/56 (44%), Positives = 37/56 (66%)
Query: 10 GGTNLSEDLRKLDYGQHVVSGTPGRVFDMIRRRVLRTRNIKMLVLDEADEMLNKGF 65
GGT L +R++ G +++ TPGR+ D+I + + + IK LVLDEAD ML+ GF
Sbjct: 399 GGTQLGHSIRQIVQGCNILCATPGRLMDIIGKEKIGLKQIKYLVLDEADRMLDMGF 454
>UNIPROTKB|Q9NQI0 [details] [associations]
symbol:DDX4 "Probable ATP-dependent RNA helicase DDX4"
species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0007275
"multicellular organismal development" evidence=IEA] [GO:0000237
"leptotene" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0007141 "male meiosis I" evidence=IEA] [GO:0007283
"spermatogenesis" evidence=IEA] [GO:0032880 "regulation of protein
localization" evidence=IEA] [GO:0033391 "chromatoid body"
evidence=IEA] [GO:0048471 "perinuclear region of cytoplasm"
evidence=IEA] [GO:0030317 "sperm motility" evidence=IMP]
[GO:0071546 "pi-body" evidence=ISS] [GO:0071547 "piP-body"
evidence=ISS] [GO:0005737 "cytoplasm" evidence=IDA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0007275 GO:GO:0005524 GO:GO:0005634
GO:GO:0048471 GO:GO:0032880 GO:GO:0007283 GO:GO:0003676
GO:GO:0030317 EMBL:CH471123 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0071546 GO:GO:0033391 GO:GO:0007141
GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
HOGENOM:HOG000268804 HOVERGEN:HBG015893 CTD:54514 KO:K13982
OrthoDB:EOG4W6NVF GO:GO:0071547 EMBL:AY004154 EMBL:AF262962
EMBL:AK292417 EMBL:BC047455 EMBL:BC088362 EMBL:AL137462
IPI:IPI00071483 IPI:IPI00456933 PIR:T46407 RefSeq:NP_001136021.1
RefSeq:NP_001160005.1 RefSeq:NP_077726.1 UniGene:Hs.223581
ProteinModelPortal:Q9NQI0 SMR:Q9NQI0 IntAct:Q9NQI0 STRING:Q9NQI0
PhosphoSite:Q9NQI0 DMDM:20138033 REPRODUCTION-2DPAGE:IPI00456933
PaxDb:Q9NQI0 PRIDE:Q9NQI0 Ensembl:ENST00000353507
Ensembl:ENST00000354991 Ensembl:ENST00000505374 GeneID:54514
KEGG:hsa:54514 UCSC:uc003jqg.4 UCSC:uc003jqh.4
GeneCards:GC05P055069 HGNC:HGNC:18700 HPA:CAB026170 HPA:HPA037763
HPA:HPA037764 MIM:605281 neXtProt:NX_Q9NQI0 PharmGKB:PA38646
InParanoid:Q9NQI0 OMA:RDAGESN PhylomeDB:Q9NQI0 GenomeRNAi:54514
NextBio:56900 ArrayExpress:Q9NQI0 Bgee:Q9NQI0 CleanEx:HS_DDX4
Genevestigator:Q9NQI0 GermOnline:ENSG00000152670 GO:GO:0000237
Uniprot:Q9NQI0
Length = 724
Score = 220 (82.5 bits), Expect = 4.0e-28, Sum P(2) = 4.0e-28
Identities = 46/123 (37%), Positives = 77/123 (62%)
Query: 81 QVDWLTEKMREANFTVSSMHGDMPQKERDGIMKEFRSGTSRVLITTDVWARGIDVQQVSL 140
+ D++ + + + +S+HGD Q+ER+ + +FR G VL+ T V ARG+D++ V
Sbjct: 552 KADFIATFLCQEKISTTSIHGDREQREREQALGDFRFGKCPVLVATSVAARGLDIENVQH 611
Query: 141 VINYDLPNNRELYIHRIGRSGRFGRKGVAISF--VKSDD------IRILRDIEQYYSTQI 192
VIN+DLP+ + Y+HRIGR+GR G G AISF ++SD+ +++L D +Q +
Sbjct: 612 VINFDLPSTIDEYVHRIGRTGRCGNTGRAISFFDLESDNHLAQPLVKVLTDAQQDVPAWL 671
Query: 193 DEM 195
+E+
Sbjct: 672 EEI 674
Score = 130 (50.8 bits), Expect = 4.0e-28, Sum P(2) = 4.0e-28
Identities = 25/56 (44%), Positives = 37/56 (66%)
Query: 10 GGTNLSEDLRKLDYGQHVVSGTPGRVFDMIRRRVLRTRNIKMLVLDEADEMLNKGF 65
GGT L +R++ G +++ TPGR+ D+I + + + IK LVLDEAD ML+ GF
Sbjct: 401 GGTQLGHSIRQIVQGCNILCATPGRLMDIIGKEKIGLKQIKYLVLDEADRMLDMGF 456
>UNIPROTKB|E1BII7 [details] [associations]
symbol:DDX43 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005622 "intracellular" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR004087
InterPro:IPR004088 InterPro:IPR011545 Pfam:PF00013 Pfam:PF00270
Pfam:PF00271 PROSITE:PS00039 PROSITE:PS50084 PROSITE:PS51194
SMART:SM00322 SMART:SM00490 GO:GO:0005524 GO:GO:0003723
GO:GO:0005622 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 EMBL:DAAA02025231 InterPro:IPR014014 PROSITE:PS51195
GeneTree:ENSGT00660000095174 EMBL:DAAA02025227 EMBL:DAAA02025228
EMBL:DAAA02025229 EMBL:DAAA02025230 IPI:IPI00712097
Ensembl:ENSBTAT00000029077 OMA:ANQNIPE Uniprot:E1BII7
Length = 647
Score = 228 (85.3 bits), Expect = 4.1e-28, Sum P(2) = 4.1e-28
Identities = 42/102 (41%), Positives = 67/102 (65%)
Query: 83 DWLTEKMREANFTVSSMHGDMPQKERDGIMKEFRSGTSRVLITTDVWARGIDVQQVSLVI 142
D L+ + +V S+HG+ Q +R+ +K F++G R+LI TD+ +RG+DV V+ V
Sbjct: 500 DHLSSDLGIRRISVESLHGNREQSDRERALKSFKTGKVRILIATDLASRGLDVHDVTHVY 559
Query: 143 NYDLPNNRELYIHRIGRSGRFGRKGVAISFVKSDDIRILRDI 184
NYD P N E Y+HR+GR+GR GR GV+I+ + +D +I ++
Sbjct: 560 NYDFPRNIEEYVHRVGRTGRAGRTGVSITLITRNDWKIAGEL 601
Score = 120 (47.3 bits), Expect = 4.1e-28, Sum P(2) = 4.1e-28
Identities = 27/75 (36%), Positives = 42/75 (56%)
Query: 8 CI-GGTNLSEDLRKLDYGQHVVSGTPGRVFDMIRRRVLRTRNIKMLVLDEADEMLNKGFK 66
CI GG + ++ L G ++ TPGR+ D+ + ++I LVLDEAD+ML+ GF+
Sbjct: 347 CIYGGGDRDGQIKDLSKGADIIIATPGRLHDLQMNNFVYLKSITYLVLDEADKMLDMGFE 406
Query: 67 EQIYDVYRYLPPATQ 81
QI + + P Q
Sbjct: 407 PQIMKILLDVRPDRQ 421
>GENEDB_PFALCIPARUM|PF08_0096 [details] [associations]
symbol:PF08_0096 "RNA helicase, putative"
species:5833 "Plasmodium falciparum" [GO:0003724 "RNA helicase
activity" evidence=ISS] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
GO:GO:0003724 InterPro:IPR014014 PROSITE:PS51195 KO:K11594
HSSP:P10081 EMBL:AL844507 RefSeq:XP_001349420.1
ProteinModelPortal:Q8IAU1 IntAct:Q8IAU1 MINT:MINT-1660402
EnsemblProtists:PF08_0096:mRNA GeneID:2655295 KEGG:pfa:PF08_0096
EuPathDB:PlasmoDB:PF3D7_0810600 HOGENOM:HOG000280970 OMA:NNPFNNN
ProtClustDB:CLSZ2432713 Uniprot:Q8IAU1
Length = 941
Score = 228 (85.3 bits), Expect = 4.2e-28, Sum P(2) = 4.2e-28
Identities = 42/86 (48%), Positives = 59/86 (68%)
Query: 99 MHGDMPQKERDGIMKEFRSGTSRVLITTDVWARGIDVQQVSLVINYDLPNNRELYIHRIG 158
+HGD Q ER+ +K F+ G +L+ TDV ARG+D+ + VIN+DLP+N + YIHRIG
Sbjct: 675 IHGDKSQDERERALKLFKRGIKNILVATDVAARGLDISNIKHVINFDLPSNIDDYIHRIG 734
Query: 159 RSGRFGRKGVAISFVKSDDIRILRDI 184
R+GR G G+A SFV D+ I +D+
Sbjct: 735 RTGRAGNIGIATSFVNEDNKNIFKDL 760
Score = 125 (49.1 bits), Expect = 4.2e-28, Sum P(2) = 4.2e-28
Identities = 28/75 (37%), Positives = 39/75 (52%)
Query: 10 GGTNLSEDLRKLDYGQHVVSGTPGRVFDMIRRRVLRTRNIKMLVLDEADEMLNKGFKEQI 69
GG N+ L LD G ++ TPGR+ D++ + ++ LVLDEAD ML+ GF QI
Sbjct: 487 GGNNIKTQLSNLDKGADIIVATPGRLNDILEKGKIKLFLTTFLVLDEADRMLDMGFSPQI 546
Query: 70 YDVYR-YLPPATQVD 83
+ Y P D
Sbjct: 547 RSIVNDYDMPGNDND 561
WARNING: HSPs involving 645 database sequences were not reported due to the
limiting value of parameter B = 250.
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.322 0.138 0.409 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 210 210 0.00080 112 3 11 22 0.47 32
31 0.48 35
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 895
No. of states in DFA: 601 (64 KB)
Total size of DFA: 171 KB (2100 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 20.87u 0.15s 21.02t Elapsed: 00:00:02
Total cpu time: 20.89u 0.15s 21.04t Elapsed: 00:00:02
Start: Thu Aug 15 17:35:30 2013 End: Thu Aug 15 17:35:32 2013
WARNINGS ISSUED: 2