Query psy6714
Match_columns 303
No_of_seqs 189 out of 1598
Neff 5.8
Searched_HMMs 29240
Date Fri Aug 16 16:33:57 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy6714.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/6714hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3tri_A Pyrroline-5-carboxylate 100.0 3.3E-30 1.1E-34 238.9 16.7 169 132-301 3-190 (280)
2 3gt0_A Pyrroline-5-carboxylate 100.0 2.8E-28 9.4E-33 220.5 15.9 170 131-301 1-188 (247)
3 2izz_A Pyrroline-5-carboxylate 99.9 4.8E-25 1.7E-29 207.4 17.2 169 131-300 21-211 (322)
4 2rcy_A Pyrroline carboxylate r 99.9 2E-23 6.9E-28 188.6 16.5 167 132-300 4-181 (262)
5 2ahr_A Putative pyrroline carb 99.9 2.8E-22 9.5E-27 181.3 16.0 165 131-300 2-180 (259)
6 1yqg_A Pyrroline-5-carboxylate 99.9 9E-22 3.1E-26 177.8 15.1 163 133-300 1-179 (263)
7 3fr7_A Putative ketol-acid red 99.8 8.7E-21 3E-25 188.6 10.4 170 130-301 51-269 (525)
8 3ggo_A Prephenate dehydrogenas 99.8 8.1E-20 2.8E-24 172.1 14.7 163 131-297 32-227 (314)
9 3c24_A Putative oxidoreductase 99.8 5.2E-20 1.8E-24 169.3 10.2 167 131-300 10-211 (286)
10 2pv7_A T-protein [includes: ch 99.8 4.7E-19 1.6E-23 164.8 8.0 156 132-300 21-192 (298)
11 3ktd_A Prephenate dehydrogenas 99.8 9.3E-19 3.2E-23 167.3 10.0 160 132-298 8-210 (341)
12 3b1f_A Putative prephenate deh 99.8 2.2E-18 7.7E-23 158.1 11.5 165 132-300 6-207 (290)
13 1np3_A Ketol-acid reductoisome 99.8 2E-18 7E-23 163.8 11.5 166 131-300 15-214 (338)
14 2g5c_A Prephenate dehydrogenas 99.7 9.3E-18 3.2E-22 153.3 12.8 162 132-300 1-199 (281)
15 2f1k_A Prephenate dehydrogenas 99.7 7.4E-18 2.5E-22 153.5 11.2 161 133-296 1-188 (279)
16 2ew2_A 2-dehydropantoate 2-red 99.7 3.4E-17 1.1E-21 150.0 13.3 161 131-293 2-213 (316)
17 2qyt_A 2-dehydropantoate 2-red 99.7 3.8E-16 1.3E-20 143.8 12.5 159 132-293 8-223 (317)
18 3d1l_A Putative NADP oxidoredu 99.7 2.1E-16 7.1E-21 143.2 9.6 163 132-300 10-196 (266)
19 4huj_A Uncharacterized protein 99.7 1.1E-15 3.9E-20 135.9 13.7 135 132-272 23-194 (220)
20 2i76_A Hypothetical protein; N 99.6 1.1E-16 3.7E-21 147.0 5.5 162 131-300 1-182 (276)
21 3dtt_A NADP oxidoreductase; st 99.6 4.3E-15 1.5E-19 134.2 13.1 159 130-295 17-231 (245)
22 1jay_A Coenzyme F420H2:NADP+ o 99.6 3.4E-15 1.2E-19 130.5 11.6 156 133-296 1-200 (212)
23 3dfu_A Uncharacterized protein 99.6 4.2E-15 1.4E-19 135.3 11.9 150 131-299 5-157 (232)
24 3hn2_A 2-dehydropantoate 2-red 99.6 8.3E-15 2.8E-19 136.6 13.4 158 131-290 1-205 (312)
25 1f0y_A HCDH, L-3-hydroxyacyl-C 99.6 2.5E-14 8.4E-19 132.5 14.3 110 164-274 88-200 (302)
26 3k96_A Glycerol-3-phosphate de 99.5 5E-14 1.7E-18 134.9 14.7 144 132-277 29-206 (356)
27 2dpo_A L-gulonate 3-dehydrogen 99.5 1.6E-13 5.3E-18 129.8 15.3 141 132-274 6-187 (319)
28 2yjz_A Metalloreductase steap4 99.2 1.9E-15 6.6E-20 133.7 0.0 134 130-270 17-176 (201)
29 1vpd_A Tartronate semialdehyde 99.5 2E-13 6.9E-18 125.2 12.8 145 132-280 5-172 (299)
30 1yj8_A Glycerol-3-phosphate de 99.5 3.1E-13 1.1E-17 128.9 14.2 112 164-276 91-215 (375)
31 1ks9_A KPA reductase;, 2-dehyd 99.5 7.2E-14 2.5E-18 126.6 9.2 155 133-290 1-195 (291)
32 1z82_A Glycerol-3-phosphate de 99.5 1.7E-13 5.7E-18 128.7 11.7 137 131-277 13-181 (335)
33 2gf2_A Hibadh, 3-hydroxyisobut 99.5 4.8E-14 1.6E-18 129.1 6.7 144 133-291 1-169 (296)
34 1x0v_A GPD-C, GPDH-C, glycerol 99.5 6.9E-13 2.4E-17 124.5 14.4 111 164-276 78-198 (354)
35 4e12_A Diketoreductase; oxidor 99.5 1.2E-12 4.2E-17 120.5 15.7 113 164-277 73-188 (283)
36 3qsg_A NAD-binding phosphogluc 99.5 4.6E-13 1.6E-17 125.2 13.0 158 132-297 24-205 (312)
37 1evy_A Glycerol-3-phosphate de 99.5 8.8E-14 3E-18 131.7 7.9 141 134-276 17-199 (366)
38 1txg_A Glycerol-3-phosphate de 99.4 4.9E-13 1.7E-17 124.1 12.3 141 133-276 1-181 (335)
39 2raf_A Putative dinucleotide-b 99.4 2E-13 6.9E-18 120.7 8.4 135 129-275 16-176 (209)
40 3obb_A Probable 3-hydroxyisobu 99.4 3.2E-13 1.1E-17 126.5 9.9 141 131-275 2-165 (300)
41 3i83_A 2-dehydropantoate 2-red 99.4 1.1E-12 3.8E-17 122.6 12.3 159 131-291 1-208 (320)
42 2cvz_A Dehydrogenase, 3-hydrox 99.4 3E-13 1E-17 123.0 8.2 159 132-299 1-179 (289)
43 3cky_A 2-hydroxymethyl glutara 99.4 6.4E-13 2.2E-17 121.9 10.2 139 132-275 4-166 (301)
44 2h78_A Hibadh, 3-hydroxyisobut 99.4 4.2E-13 1.4E-17 123.7 8.5 149 131-284 2-174 (302)
45 2uyy_A N-PAC protein; long-cha 99.4 2.2E-12 7.6E-17 119.6 13.1 162 132-300 30-219 (316)
46 1yb4_A Tartronic semialdehyde 99.4 1.2E-12 4E-17 119.6 9.9 142 131-278 2-167 (295)
47 2zyd_A 6-phosphogluconate dehy 99.4 3.3E-12 1.1E-16 126.9 13.6 134 132-270 15-174 (480)
48 1i36_A Conserved hypothetical 99.4 5.4E-12 1.8E-16 113.8 13.7 153 133-299 1-173 (264)
49 3ghy_A Ketopantoate reductase 99.4 4.2E-12 1.4E-16 119.4 13.4 156 132-290 3-225 (335)
50 3hwr_A 2-dehydropantoate 2-red 99.4 2.7E-12 9.2E-17 120.2 11.6 150 132-290 19-216 (318)
51 2vns_A Metalloreductase steap3 99.3 8.1E-12 2.8E-16 110.7 13.0 156 131-296 27-212 (215)
52 2iz1_A 6-phosphogluconate dehy 99.3 9.2E-12 3.1E-16 123.1 14.1 135 132-271 5-165 (474)
53 3mog_A Probable 3-hydroxybutyr 99.3 1.2E-11 4E-16 123.1 14.7 108 165-274 74-184 (483)
54 4e21_A 6-phosphogluconate dehy 99.3 3E-11 1E-15 115.8 16.1 132 132-268 22-174 (358)
55 3k6j_A Protein F01G10.3, confi 99.3 6.6E-11 2.3E-15 117.2 18.2 141 132-275 54-231 (460)
56 4gbj_A 6-phosphogluconate dehy 99.3 6.9E-12 2.3E-16 117.0 10.5 139 132-274 5-164 (297)
57 3pdu_A 3-hydroxyisobutyrate de 99.3 2.2E-11 7.6E-16 111.7 13.7 138 132-275 1-163 (287)
58 2p4q_A 6-phosphogluconate dehy 99.3 1.1E-11 3.9E-16 123.6 12.7 134 132-270 10-170 (497)
59 3doj_A AT3G25530, dehydrogenas 99.3 2.7E-11 9.4E-16 112.8 14.2 139 131-275 20-183 (310)
60 3pef_A 6-phosphogluconate dehy 99.3 1.9E-11 6.4E-16 112.2 12.7 146 133-284 2-172 (287)
61 3qha_A Putative oxidoreductase 99.3 5.9E-11 2E-15 109.8 15.1 137 132-275 15-173 (296)
62 3g0o_A 3-hydroxyisobutyrate de 99.3 5.9E-11 2E-15 109.9 14.8 139 131-275 6-170 (303)
63 2pgd_A 6-phosphogluconate dehy 99.3 2.2E-11 7.7E-16 120.6 12.6 135 132-271 2-163 (482)
64 3ego_A Probable 2-dehydropanto 99.2 5.5E-12 1.9E-16 117.6 6.4 155 131-290 1-200 (307)
65 3l6d_A Putative oxidoreductase 99.2 6.9E-11 2.3E-15 110.0 11.9 137 131-273 8-167 (306)
66 1pgj_A 6PGDH, 6-PGDH, 6-phosph 99.2 1.4E-10 4.7E-15 115.0 14.6 133 133-270 2-164 (478)
67 4dll_A 2-hydroxy-3-oxopropiona 99.2 1.6E-10 5.6E-15 108.1 13.6 139 131-275 30-191 (320)
68 4ezb_A Uncharacterized conserv 99.2 3.7E-10 1.2E-14 105.9 15.6 134 131-275 23-186 (317)
69 1zej_A HBD-9, 3-hydroxyacyl-CO 99.2 3.4E-10 1.2E-14 105.9 14.3 140 132-276 12-173 (293)
70 1wdk_A Fatty oxidation complex 99.2 3.6E-10 1.2E-14 117.3 15.3 140 132-274 314-493 (715)
71 4gwg_A 6-phosphogluconate dehy 99.1 3.7E-10 1.3E-14 112.5 11.6 135 132-271 4-165 (484)
72 3g17_A Similar to 2-dehydropan 99.1 2.7E-11 9.4E-16 111.9 3.0 139 131-277 1-162 (294)
73 1zcj_A Peroxisomal bifunctiona 99.1 1.6E-09 5.3E-14 106.9 14.9 109 165-275 104-215 (463)
74 2wtb_A MFP2, fatty acid multif 99.0 1.7E-09 5.9E-14 112.3 14.8 140 132-274 312-491 (725)
75 4fgw_A Glycerol-3-phosphate de 99.0 2.8E-09 9.4E-14 103.7 12.2 114 163-277 104-235 (391)
76 1mv8_A GMD, GDP-mannose 6-dehy 98.9 3.1E-09 1.1E-13 103.6 9.7 138 133-273 1-200 (436)
77 3gg2_A Sugar dehydrogenase, UD 98.8 1.3E-08 4.3E-13 100.3 10.5 134 132-269 2-195 (450)
78 3pid_A UDP-glucose 6-dehydroge 98.8 1.5E-08 5.1E-13 99.7 10.0 126 130-266 34-212 (432)
79 2q3e_A UDP-glucose 6-dehydroge 98.7 1.8E-08 6.1E-13 99.2 7.8 139 132-274 5-212 (467)
80 1ygy_A PGDH, D-3-phosphoglycer 98.7 2.3E-08 7.9E-13 100.2 7.9 150 130-282 140-325 (529)
81 1bg6_A N-(1-D-carboxylethyl)-L 98.7 6.5E-08 2.2E-12 90.1 9.8 86 132-218 4-118 (359)
82 3c7a_A Octopine dehydrogenase; 98.7 3.9E-08 1.3E-12 94.2 8.0 82 132-214 2-120 (404)
83 1dlj_A UDP-glucose dehydrogena 98.7 7.8E-08 2.7E-12 93.0 10.1 131 133-267 1-184 (402)
84 2o3j_A UDP-glucose 6-dehydroge 98.6 1.1E-07 3.9E-12 94.1 10.3 140 132-273 9-217 (481)
85 3ado_A Lambda-crystallin; L-gu 98.6 6.5E-07 2.2E-11 84.7 15.0 108 165-273 76-186 (319)
86 4a7p_A UDP-glucose dehydrogena 98.6 2.6E-07 8.9E-12 91.0 12.6 135 132-269 8-198 (446)
87 3g79_A NDP-N-acetyl-D-galactos 98.4 1.2E-06 4.2E-11 87.0 12.0 104 165-273 91-225 (478)
88 2y0c_A BCEC, UDP-glucose dehyd 98.4 2.7E-07 9.1E-12 91.5 7.2 140 131-274 7-213 (478)
89 2gcg_A Glyoxylate reductase/hy 98.4 4.1E-07 1.4E-11 85.8 6.7 93 129-223 152-261 (330)
90 2w2k_A D-mandelate dehydrogena 98.3 3.5E-07 1.2E-11 87.1 5.6 94 130-224 161-272 (348)
91 1f06_A MESO-diaminopimelate D- 98.3 5.4E-09 1.9E-13 98.1 -7.5 151 132-290 3-186 (320)
92 1gdh_A D-glycerate dehydrogena 98.3 4.1E-07 1.4E-11 85.7 5.1 93 130-223 144-253 (320)
93 3ba1_A HPPR, hydroxyphenylpyru 98.2 3.9E-07 1.3E-11 86.5 3.3 93 130-223 162-266 (333)
94 2dbq_A Glyoxylate reductase; D 98.2 9.6E-07 3.3E-11 83.5 5.9 92 130-223 148-255 (334)
95 2ekl_A D-3-phosphoglycerate de 98.2 2.5E-06 8.6E-11 80.0 8.4 93 130-224 140-248 (313)
96 1mx3_A CTBP1, C-terminal bindi 98.2 1.2E-06 4.2E-11 83.6 5.5 93 130-223 166-274 (347)
97 4dgs_A Dehydrogenase; structur 98.2 2.5E-06 8.4E-11 81.3 7.1 95 129-224 168-274 (340)
98 2hk9_A Shikimate dehydrogenase 98.2 9.7E-07 3.3E-11 80.8 3.9 108 131-243 128-250 (275)
99 2nac_A NAD-dependent formate d 98.1 3.1E-06 1.1E-10 82.2 6.8 94 130-224 189-299 (393)
100 3gg9_A D-3-phosphoglycerate de 98.1 2.9E-06 9.9E-11 81.1 6.3 94 129-223 157-266 (352)
101 1wwk_A Phosphoglycerate dehydr 98.1 3.1E-06 1.1E-10 79.2 6.4 92 130-223 140-247 (307)
102 3ojo_A CAP5O; rossmann fold, c 98.1 1.1E-05 3.8E-10 79.1 10.0 133 133-273 12-205 (431)
103 3jtm_A Formate dehydrogenase, 98.1 3.1E-06 1E-10 81.0 5.8 93 130-223 162-271 (351)
104 4hkt_A Inositol 2-dehydrogenas 98.1 2.8E-05 9.6E-10 72.2 12.3 86 131-221 2-106 (331)
105 2d0i_A Dehydrogenase; structur 98.1 1.8E-06 6.2E-11 81.7 4.0 91 130-223 144-250 (333)
106 2ho3_A Oxidoreductase, GFO/IDH 98.0 6.2E-05 2.1E-09 69.7 13.8 86 132-221 1-105 (325)
107 2j6i_A Formate dehydrogenase; 98.0 4.5E-06 1.5E-10 80.0 6.0 93 130-223 162-272 (364)
108 3euw_A MYO-inositol dehydrogen 98.0 3.6E-05 1.2E-09 71.8 11.7 85 132-220 4-107 (344)
109 3ezy_A Dehydrogenase; structur 98.0 3.6E-05 1.2E-09 71.9 11.5 87 131-221 1-107 (344)
110 3rc1_A Sugar 3-ketoreductase; 98.0 4.4E-05 1.5E-09 71.8 12.1 87 132-221 27-132 (350)
111 3gvx_A Glycerate dehydrogenase 98.0 2E-06 6.9E-11 80.2 2.8 93 130-223 120-224 (290)
112 2g76_A 3-PGDH, D-3-phosphoglyc 98.0 7.3E-06 2.5E-10 77.8 6.7 92 130-223 163-270 (335)
113 3zwc_A Peroxisomal bifunctiona 98.0 0.00013 4.4E-09 76.1 16.3 106 166-273 384-492 (742)
114 3ulk_A Ketol-acid reductoisome 98.0 2.9E-05 1E-09 76.6 10.5 137 130-269 35-200 (491)
115 1hyh_A L-hicdh, L-2-hydroxyiso 98.0 1.6E-05 5.4E-10 73.8 8.0 81 132-215 1-127 (309)
116 4hy3_A Phosphoglycerate oxidor 98.0 1.4E-05 4.7E-10 76.9 7.8 93 130-224 174-282 (365)
117 4e5n_A Thermostable phosphite 97.9 5E-06 1.7E-10 78.7 4.1 92 130-223 143-251 (330)
118 1qp8_A Formate dehydrogenase; 97.9 3E-06 1E-10 79.3 2.5 93 130-223 122-225 (303)
119 3q2i_A Dehydrogenase; rossmann 97.9 7E-05 2.4E-09 70.2 11.7 86 131-220 12-117 (354)
120 3e9m_A Oxidoreductase, GFO/IDH 97.9 6E-05 2E-09 70.2 10.9 86 132-221 5-110 (330)
121 4g2n_A D-isomer specific 2-hyd 97.9 1.1E-05 3.7E-10 77.0 5.9 94 129-223 170-278 (345)
122 3evn_A Oxidoreductase, GFO/IDH 97.9 0.00011 3.7E-09 68.3 12.6 124 132-273 5-151 (329)
123 1lld_A L-lactate dehydrogenase 97.9 1.3E-05 4.4E-10 74.0 5.9 100 131-233 6-150 (319)
124 3c1a_A Putative oxidoreductase 97.9 4.2E-05 1.4E-09 70.6 9.4 125 131-273 9-151 (315)
125 2pi1_A D-lactate dehydrogenase 97.9 1E-05 3.5E-10 76.8 5.1 93 130-224 139-246 (334)
126 2cuk_A Glycerate dehydrogenase 97.8 1.1E-05 3.8E-10 75.6 4.8 92 130-223 142-244 (311)
127 3pp8_A Glyoxylate/hydroxypyruv 97.8 1.1E-05 3.6E-10 76.1 4.5 93 130-223 137-244 (315)
128 3hg7_A D-isomer specific 2-hyd 97.8 1.4E-05 4.9E-10 75.6 5.4 93 130-223 138-245 (324)
129 3db2_A Putative NADPH-dependen 97.8 0.00012 4.2E-09 68.5 11.7 86 132-221 5-109 (354)
130 2yq5_A D-isomer specific 2-hyd 97.8 8.3E-06 2.8E-10 77.8 3.2 92 130-223 146-251 (343)
131 2i99_A MU-crystallin homolog; 97.8 2.3E-05 7.9E-10 73.1 6.1 74 131-209 134-225 (312)
132 3d4o_A Dipicolinate synthase s 97.8 0.0001 3.5E-09 67.8 10.3 101 130-239 153-272 (293)
133 3evt_A Phosphoglycerate dehydr 97.8 1.8E-05 6E-10 74.9 4.9 93 130-223 135-242 (324)
134 3mz0_A Inositol 2-dehydrogenas 97.8 9.4E-05 3.2E-09 69.1 9.6 86 131-220 1-108 (344)
135 2rir_A Dipicolinate synthase, 97.8 0.00012 4.2E-09 67.4 10.2 103 130-240 155-275 (300)
136 1a5z_A L-lactate dehydrogenase 97.8 4.2E-05 1.4E-09 71.5 7.1 97 133-232 1-141 (319)
137 3vtf_A UDP-glucose 6-dehydroge 97.7 0.00016 5.4E-09 71.3 11.3 140 131-273 20-218 (444)
138 1j4a_A D-LDH, D-lactate dehydr 97.7 7.9E-06 2.7E-10 77.2 1.8 92 130-223 144-250 (333)
139 3uuw_A Putative oxidoreductase 97.7 9.8E-05 3.3E-09 67.8 9.0 86 132-220 6-108 (308)
140 3cea_A MYO-inositol 2-dehydrog 97.7 0.00029 1E-08 65.3 12.3 72 132-207 8-99 (346)
141 1xea_A Oxidoreductase, GFO/IDH 97.7 0.00018 6E-09 66.6 10.4 65 132-196 2-83 (323)
142 2dc1_A L-aspartate dehydrogena 97.7 5.2E-05 1.8E-09 67.4 6.6 75 133-211 1-82 (236)
143 2d5c_A AROE, shikimate 5-dehyd 97.7 1.9E-05 6.4E-10 71.4 3.6 105 131-243 116-237 (263)
144 3ohs_X Trans-1,2-dihydrobenzen 97.7 0.00032 1.1E-08 65.1 11.9 87 131-221 1-109 (334)
145 1sc6_A PGDH, D-3-phosphoglycer 97.6 2.5E-05 8.4E-10 76.0 3.9 94 130-224 143-249 (404)
146 3k5p_A D-3-phosphoglycerate de 97.6 2.7E-05 9.1E-10 76.2 4.1 94 130-224 154-260 (416)
147 1h6d_A Precursor form of gluco 97.6 0.00051 1.7E-08 66.7 12.9 87 132-221 83-193 (433)
148 3u62_A Shikimate dehydrogenase 97.6 9.9E-06 3.4E-10 73.9 0.5 106 134-244 110-231 (253)
149 2glx_A 1,5-anhydro-D-fructose 97.6 0.00039 1.3E-08 64.1 11.0 86 133-221 1-105 (332)
150 3oet_A Erythronate-4-phosphate 97.6 4E-05 1.4E-09 74.2 4.3 92 129-223 116-225 (381)
151 3qy9_A DHPR, dihydrodipicolina 97.6 6E-05 2E-09 68.6 5.1 96 132-236 3-110 (243)
152 1xdw_A NAD+-dependent (R)-2-hy 97.6 2.3E-05 7.8E-10 74.0 2.2 92 130-223 144-249 (331)
153 3moi_A Probable dehydrogenase; 97.5 0.00036 1.2E-08 66.4 10.3 86 132-221 2-107 (387)
154 2o4c_A Erythronate-4-phosphate 97.5 3.3E-05 1.1E-09 74.7 2.9 91 130-223 114-222 (380)
155 1dxy_A D-2-hydroxyisocaproate 97.5 2.7E-05 9.1E-10 73.7 2.1 93 130-224 143-249 (333)
156 3e82_A Putative oxidoreductase 97.5 0.00077 2.6E-08 63.6 12.0 86 132-221 7-110 (364)
157 1y81_A Conserved hypothetical 97.5 5.6E-05 1.9E-09 62.7 3.5 103 132-239 14-128 (138)
158 3e18_A Oxidoreductase; dehydro 97.5 0.00032 1.1E-08 66.1 9.0 85 132-220 5-107 (359)
159 3f4l_A Putative oxidoreductase 97.5 0.00042 1.4E-08 64.7 9.3 87 131-221 1-108 (345)
160 1lss_A TRK system potassium up 97.4 0.00056 1.9E-08 54.2 8.8 82 132-215 4-107 (140)
161 2duw_A Putative COA-binding pr 97.4 9.4E-05 3.2E-09 61.7 4.3 103 132-240 13-130 (145)
162 2ewd_A Lactate dehydrogenase,; 97.4 8.7E-05 3E-09 69.1 4.5 88 132-222 4-135 (317)
163 1ydw_A AX110P-like protein; st 97.4 0.00061 2.1E-08 63.9 10.3 72 132-207 6-99 (362)
164 3ec7_A Putative dehydrogenase; 97.4 0.0005 1.7E-08 64.8 9.5 85 132-220 23-129 (357)
165 3i23_A Oxidoreductase, GFO/IDH 97.4 0.001 3.6E-08 62.2 11.6 88 131-221 1-108 (349)
166 3gdo_A Uncharacterized oxidore 97.4 0.001 3.5E-08 62.6 11.5 87 132-221 5-108 (358)
167 2v6b_A L-LDH, L-lactate dehydr 97.4 0.00044 1.5E-08 64.2 8.6 99 133-234 1-141 (304)
168 3kux_A Putative oxidoreductase 97.4 0.001 3.6E-08 62.2 11.0 87 132-221 7-110 (352)
169 3fhl_A Putative oxidoreductase 97.4 0.00081 2.8E-08 63.3 10.3 87 132-221 5-108 (362)
170 1tlt_A Putative oxidoreductase 97.3 0.00063 2.2E-08 62.6 8.7 84 132-218 5-105 (319)
171 2nqt_A N-acetyl-gamma-glutamyl 97.3 0.00072 2.4E-08 64.6 8.6 146 132-287 9-191 (352)
172 4had_A Probable oxidoreductase 97.3 0.00057 1.9E-08 63.6 7.8 73 132-207 23-114 (350)
173 1x7d_A Ornithine cyclodeaminas 97.3 0.00013 4.4E-09 69.5 3.4 78 131-212 128-227 (350)
174 2b0j_A 5,10-methenyltetrahydro 97.3 0.003 1E-07 59.2 12.3 118 161-282 126-250 (358)
175 2p2s_A Putative oxidoreductase 97.3 0.0029 9.8E-08 58.6 12.4 87 132-221 4-109 (336)
176 4f3y_A DHPR, dihydrodipicolina 97.2 0.0002 6.8E-09 66.1 4.2 83 132-218 7-112 (272)
177 3oj0_A Glutr, glutamyl-tRNA re 97.2 0.00022 7.4E-09 58.3 4.0 75 132-211 21-111 (144)
178 3v5n_A Oxidoreductase; structu 97.1 0.003 1E-07 60.8 11.5 86 132-221 37-153 (417)
179 3dr3_A N-acetyl-gamma-glutamyl 97.1 0.0015 5.2E-08 62.0 9.3 147 132-288 4-193 (337)
180 3m2t_A Probable dehydrogenase; 97.1 0.00078 2.7E-08 63.5 7.1 86 132-220 5-110 (359)
181 3bio_A Oxidoreductase, GFO/IDH 97.1 0.00032 1.1E-08 65.0 4.2 72 132-208 9-94 (304)
182 2g1u_A Hypothetical protein TM 97.1 0.0024 8.1E-08 52.6 9.1 84 131-215 18-123 (155)
183 3fef_A Putative glucosidase LP 97.1 0.00081 2.8E-08 66.3 7.2 97 132-230 5-167 (450)
184 1ldn_A L-lactate dehydrogenase 97.1 0.00096 3.3E-08 62.3 7.3 100 132-234 6-150 (316)
185 1guz_A Malate dehydrogenase; o 97.1 0.00041 1.4E-08 64.5 4.7 95 133-231 1-142 (310)
186 3ce6_A Adenosylhomocysteinase; 97.1 0.0025 8.4E-08 63.6 10.4 152 132-291 274-464 (494)
187 1zh8_A Oxidoreductase; TM0312, 97.0 0.0057 1.9E-07 57.0 11.5 87 131-221 17-125 (340)
188 1v8b_A Adenosylhomocysteinase; 96.9 0.002 6.8E-08 64.0 8.5 86 131-220 256-357 (479)
189 4gqa_A NAD binding oxidoreduct 96.9 0.0073 2.5E-07 57.5 12.2 87 132-222 26-140 (412)
190 2hjr_A Malate dehydrogenase; m 96.9 0.0021 7.2E-08 60.3 8.3 81 132-215 14-136 (328)
191 3kb6_A D-lactate dehydrogenase 96.9 0.00081 2.8E-08 63.6 5.2 93 130-224 139-246 (334)
192 3ic5_A Putative saccharopine d 96.9 0.0025 8.6E-08 48.8 7.0 77 131-211 4-101 (118)
193 3c85_A Putative glutathione-re 96.9 0.0024 8.3E-08 53.7 7.5 79 132-212 39-141 (183)
194 2i6t_A Ubiquitin-conjugating e 96.9 0.0021 7E-08 60.0 7.6 81 132-215 14-130 (303)
195 2ixa_A Alpha-N-acetylgalactosa 96.9 0.0045 1.5E-07 59.9 10.2 85 132-220 20-133 (444)
196 3dty_A Oxidoreductase, GFO/IDH 96.9 0.0063 2.1E-07 58.0 11.0 85 132-221 12-128 (398)
197 1pzg_A LDH, lactate dehydrogen 96.8 0.0026 8.9E-08 59.8 8.0 82 132-215 9-137 (331)
198 3pqe_A L-LDH, L-lactate dehydr 96.8 0.0019 6.6E-08 60.9 6.9 100 132-234 5-149 (326)
199 3llv_A Exopolyphosphatase-rela 96.8 0.0075 2.6E-07 48.4 9.5 89 131-220 5-114 (141)
200 3ijp_A DHPR, dihydrodipicolina 96.8 0.0012 4E-08 61.6 5.0 88 132-223 21-135 (288)
201 3d0o_A L-LDH 1, L-lactate dehy 96.8 0.0026 8.9E-08 59.4 7.3 101 132-235 6-151 (317)
202 2czc_A Glyceraldehyde-3-phosph 96.7 0.0026 8.8E-08 59.9 7.1 62 132-194 2-97 (334)
203 1oju_A MDH, malate dehydrogena 96.7 0.002 6.8E-08 59.9 6.2 80 133-215 1-123 (294)
204 2nu8_A Succinyl-COA ligase [AD 96.7 0.0046 1.6E-07 57.1 8.6 83 132-217 7-103 (288)
205 3hdj_A Probable ornithine cycl 96.7 0.0017 5.9E-08 60.8 5.6 76 132-214 121-216 (313)
206 1ez4_A Lactate dehydrogenase; 96.7 0.0028 9.7E-08 59.3 7.0 101 132-235 5-149 (318)
207 3btv_A Galactose/lactose metab 96.7 0.0067 2.3E-07 58.8 9.7 64 132-196 20-109 (438)
208 1y6j_A L-lactate dehydrogenase 96.6 0.0033 1.1E-07 58.7 7.1 102 132-236 7-152 (318)
209 1t2d_A LDH-P, L-lactate dehydr 96.6 0.0046 1.6E-07 57.9 7.7 81 132-215 4-131 (322)
210 1ur5_A Malate dehydrogenase; o 96.6 0.0047 1.6E-07 57.3 7.7 82 131-215 1-124 (309)
211 4ew6_A D-galactose-1-dehydroge 96.6 0.0023 7.8E-08 59.7 5.4 86 132-220 25-123 (330)
212 2hmt_A YUAA protein; RCK, KTN, 96.6 0.0051 1.8E-07 48.6 6.8 81 131-213 5-107 (144)
213 2xxj_A L-LDH, L-lactate dehydr 96.5 0.0036 1.2E-07 58.3 6.7 99 133-234 1-143 (310)
214 3d64_A Adenosylhomocysteinase; 96.5 0.0034 1.2E-07 62.6 6.8 85 131-222 276-378 (494)
215 3u3x_A Oxidoreductase; structu 96.5 0.0089 3E-07 56.3 9.3 85 133-220 27-130 (361)
216 3h9u_A Adenosylhomocysteinase; 96.5 0.0039 1.3E-07 61.3 7.0 87 131-221 210-312 (436)
217 1obb_A Maltase, alpha-glucosid 96.5 0.0073 2.5E-07 60.0 9.0 64 165-231 66-173 (480)
218 2zqz_A L-LDH, L-lactate dehydr 96.5 0.0041 1.4E-07 58.5 6.8 101 132-235 9-153 (326)
219 1omo_A Alanine dehydrogenase; 96.5 0.0023 7.9E-08 59.9 5.0 72 131-209 124-216 (322)
220 2nvw_A Galactose/lactose metab 96.4 0.017 5.7E-07 56.9 10.6 64 132-196 39-128 (479)
221 4gmf_A Yersiniabactin biosynth 96.4 0.0065 2.2E-07 58.1 7.4 84 132-221 7-111 (372)
222 3nep_X Malate dehydrogenase; h 96.4 0.0095 3.2E-07 55.9 8.4 81 133-215 1-123 (314)
223 3abi_A Putative uncharacterize 96.3 0.0092 3.1E-07 56.2 8.1 76 131-210 15-108 (365)
224 1j5p_A Aspartate dehydrogenase 96.3 0.0029 9.8E-08 58.0 4.3 75 132-212 12-93 (253)
225 3fwz_A Inner membrane protein 96.3 0.019 6.6E-07 46.4 8.9 80 132-213 7-108 (140)
226 1dih_A Dihydrodipicolinate red 96.3 0.0029 1E-07 58.1 4.1 84 132-219 5-112 (273)
227 2d59_A Hypothetical protein PH 96.2 0.004 1.4E-07 51.6 4.6 101 132-237 22-134 (144)
228 3l4b_C TRKA K+ channel protien 96.2 0.013 4.3E-07 50.9 8.0 81 133-214 1-103 (218)
229 1vkn_A N-acetyl-gamma-glutamyl 96.2 0.0073 2.5E-07 57.7 7.0 148 132-289 13-193 (351)
230 1cf2_P Protein (glyceraldehyde 96.2 0.0049 1.7E-07 58.3 5.6 76 132-211 1-110 (337)
231 1b7g_O Protein (glyceraldehyde 96.2 0.01 3.5E-07 56.1 7.8 63 132-195 1-96 (340)
232 3upl_A Oxidoreductase; rossman 96.2 0.011 3.6E-07 58.3 7.9 74 132-209 23-138 (446)
233 1u8x_X Maltose-6'-phosphate gl 96.2 0.013 4.3E-07 58.1 8.5 65 165-231 91-193 (472)
234 1lc0_A Biliverdin reductase A; 96.2 0.0066 2.2E-07 55.6 6.0 71 132-207 7-93 (294)
235 3ldh_A Lactate dehydrogenase; 96.1 0.0067 2.3E-07 57.4 6.1 82 132-216 21-144 (330)
236 1xyg_A Putative N-acetyl-gamma 96.1 0.011 3.6E-07 56.4 7.4 147 132-289 16-199 (359)
237 1iuk_A Hypothetical protein TT 96.1 0.0036 1.2E-07 51.7 3.6 100 132-237 13-127 (140)
238 4fb5_A Probable oxidoreductase 96.1 0.014 4.8E-07 54.2 8.0 71 133-207 26-122 (393)
239 3ip3_A Oxidoreductase, putativ 96.1 0.0046 1.6E-07 57.4 4.6 73 131-207 1-95 (337)
240 3vku_A L-LDH, L-lactate dehydr 96.0 0.014 4.6E-07 55.1 7.6 82 132-215 9-130 (326)
241 3do5_A HOM, homoserine dehydro 96.0 0.0053 1.8E-07 57.9 4.8 77 132-209 2-114 (327)
242 3p2y_A Alanine dehydrogenase/p 96.0 0.0051 1.7E-07 59.4 4.6 74 132-210 184-302 (381)
243 3fi9_A Malate dehydrogenase; s 96.0 0.011 3.8E-07 56.1 6.8 83 131-215 7-131 (343)
244 3oqb_A Oxidoreductase; structu 95.9 0.014 4.8E-07 54.9 7.3 86 132-221 6-126 (383)
245 4dpl_A Malonyl-COA/succinyl-CO 95.9 0.0076 2.6E-07 57.6 5.3 78 132-213 7-113 (359)
246 4dpk_A Malonyl-COA/succinyl-CO 95.9 0.0076 2.6E-07 57.6 5.3 78 132-213 7-113 (359)
247 1ys4_A Aspartate-semialdehyde 95.9 0.0089 3E-07 56.6 5.6 77 132-212 8-116 (354)
248 4h3v_A Oxidoreductase domain p 95.8 0.015 5.2E-07 53.9 7.0 71 133-207 7-103 (390)
249 3p7m_A Malate dehydrogenase; p 95.8 0.022 7.4E-07 53.5 8.0 82 132-215 5-127 (321)
250 2x0j_A Malate dehydrogenase; o 95.8 0.024 8.2E-07 52.7 8.1 82 133-216 1-124 (294)
251 1oi7_A Succinyl-COA synthetase 95.8 0.02 6.9E-07 52.8 7.6 82 132-216 7-102 (288)
252 1nvm_B Acetaldehyde dehydrogen 95.7 0.011 3.9E-07 55.1 5.7 75 132-208 4-102 (312)
253 2d4a_B Malate dehydrogenase; a 95.7 0.026 8.7E-07 52.5 8.0 79 134-215 1-121 (308)
254 2z2v_A Hypothetical protein PH 95.7 0.0074 2.5E-07 57.5 4.4 75 132-210 16-108 (365)
255 1p9l_A Dihydrodipicolinate red 95.7 0.014 4.8E-07 52.9 5.9 76 133-218 1-84 (245)
256 2vt3_A REX, redox-sensing tran 95.7 0.0032 1.1E-07 56.1 1.7 66 132-198 85-167 (215)
257 3o9z_A Lipopolysaccaride biosy 95.7 0.031 1.1E-06 51.6 8.3 86 131-221 2-115 (312)
258 3oa2_A WBPB; oxidoreductase, s 95.6 0.032 1.1E-06 51.6 8.3 87 131-221 2-116 (318)
259 2yyy_A Glyceraldehyde-3-phosph 95.6 0.026 8.8E-07 53.5 7.7 38 169-208 74-111 (343)
260 4dio_A NAD(P) transhydrogenase 95.6 0.0077 2.6E-07 58.6 4.1 79 132-210 190-312 (405)
261 1s6y_A 6-phospho-beta-glucosid 95.6 0.021 7.1E-07 56.1 7.0 64 166-231 73-174 (450)
262 3gvi_A Malate dehydrogenase; N 95.5 0.041 1.4E-06 51.7 8.6 81 132-215 7-129 (324)
263 2ejw_A HDH, homoserine dehydro 95.4 0.016 5.4E-07 54.8 5.6 72 132-208 3-96 (332)
264 3n58_A Adenosylhomocysteinase; 95.4 0.048 1.6E-06 53.9 8.9 76 131-212 246-336 (464)
265 4aj2_A L-lactate dehydrogenase 95.4 0.023 7.7E-07 53.7 6.4 83 130-215 17-141 (331)
266 3pwk_A Aspartate-semialdehyde 95.3 0.011 3.6E-07 56.8 3.8 78 131-212 1-97 (366)
267 3gvp_A Adenosylhomocysteinase 95.2 0.018 6.3E-07 56.5 5.1 76 131-212 219-309 (435)
268 2ozp_A N-acetyl-gamma-glutamyl 95.0 0.033 1.1E-06 52.7 6.2 147 132-288 4-184 (345)
269 1t4b_A Aspartate-semialdehyde 94.9 0.044 1.5E-06 52.4 6.9 76 132-212 1-100 (367)
270 1mld_A Malate dehydrogenase; o 94.9 0.05 1.7E-06 50.6 7.0 82 133-216 1-123 (314)
271 2r00_A Aspartate-semialdehyde 94.8 0.017 5.8E-07 54.4 3.8 78 131-212 2-98 (336)
272 1gpj_A Glutamyl-tRNA reductase 94.8 0.064 2.2E-06 51.4 7.9 81 131-212 166-268 (404)
273 3mtj_A Homoserine dehydrogenas 94.8 0.068 2.3E-06 52.5 8.0 73 133-209 11-109 (444)
274 2ep5_A 350AA long hypothetical 94.8 0.037 1.3E-06 52.3 5.9 76 132-212 4-110 (350)
275 3hsk_A Aspartate-semialdehyde 94.7 0.023 7.9E-07 54.7 4.3 38 173-213 90-127 (381)
276 2fp4_A Succinyl-COA ligase [GD 94.6 0.12 4E-06 48.1 8.8 89 132-223 13-119 (305)
277 2yv1_A Succinyl-COA ligase [AD 94.6 0.072 2.5E-06 49.2 7.3 82 132-216 13-108 (294)
278 3u95_A Glycoside hydrolase, fa 94.4 0.13 4.5E-06 50.8 9.0 20 165-184 65-84 (477)
279 3tl2_A Malate dehydrogenase; c 94.3 0.13 4.3E-06 48.1 8.4 82 132-215 8-132 (315)
280 3tz6_A Aspartate-semialdehyde 94.2 0.027 9.3E-07 53.5 3.5 76 133-212 2-96 (344)
281 2yv2_A Succinyl-COA synthetase 93.9 0.18 6.2E-06 46.6 8.4 82 132-216 13-109 (297)
282 3ing_A Homoserine dehydrogenas 93.9 0.059 2E-06 50.7 5.2 41 169-209 73-116 (325)
283 2vhw_A Alanine dehydrogenase; 93.8 0.063 2.1E-06 51.1 5.3 75 131-210 167-268 (377)
284 3eag_A UDP-N-acetylmuramate:L- 93.8 0.52 1.8E-05 43.6 11.4 54 131-184 3-74 (326)
285 1id1_A Putative potassium chan 93.8 0.28 9.6E-06 39.7 8.6 83 132-215 3-110 (153)
286 1o6z_A MDH, malate dehydrogena 93.8 0.16 5.5E-06 46.8 7.9 96 133-231 1-143 (303)
287 1u8f_O GAPDH, glyceraldehyde-3 93.8 0.1 3.5E-06 49.2 6.6 35 175-212 90-124 (335)
288 1x13_A NAD(P) transhydrogenase 93.7 0.04 1.4E-06 53.1 3.8 74 132-210 172-292 (401)
289 3hhp_A Malate dehydrogenase; M 93.7 0.16 5.6E-06 47.3 7.8 82 133-216 1-124 (312)
290 2hjs_A USG-1 protein homolog; 93.4 0.044 1.5E-06 51.7 3.4 77 132-212 6-101 (340)
291 1smk_A Malate dehydrogenase, g 93.4 0.1 3.6E-06 48.6 6.0 83 131-215 7-130 (326)
292 3cps_A Glyceraldehyde 3-phosph 93.4 0.042 1.4E-06 52.5 3.3 34 175-211 104-139 (354)
293 3l9w_A Glutathione-regulated p 93.1 0.25 8.5E-06 47.7 8.3 79 132-211 4-103 (413)
294 2dt5_A AT-rich DNA-binding pro 93.1 0.035 1.2E-06 49.2 2.0 65 132-197 80-161 (211)
295 3keo_A Redox-sensing transcrip 93.0 0.032 1.1E-06 49.7 1.7 65 132-197 84-169 (212)
296 3c8m_A Homoserine dehydrogenas 93.0 0.23 7.8E-06 46.5 7.6 38 169-209 78-120 (331)
297 3uw3_A Aspartate-semialdehyde 92.9 0.12 4.2E-06 49.6 5.8 77 131-211 3-102 (377)
298 1l7d_A Nicotinamide nucleotide 92.8 0.092 3.1E-06 49.9 4.7 75 131-210 171-294 (384)
299 1ebf_A Homoserine dehydrogenas 92.7 0.043 1.5E-06 52.2 2.3 22 131-153 3-24 (358)
300 3pzr_A Aspartate-semialdehyde 92.6 0.13 4.4E-06 49.4 5.4 75 133-211 1-98 (370)
301 1up7_A 6-phospho-beta-glucosid 92.4 0.48 1.6E-05 46.0 9.3 62 167-231 64-163 (417)
302 7mdh_A Protein (malate dehydro 92.1 0.51 1.7E-05 45.3 8.9 52 165-216 97-164 (375)
303 3don_A Shikimate dehydrogenase 91.9 0.071 2.4E-06 49.0 2.5 108 132-243 117-241 (277)
304 3e5r_O PP38, glyceraldehyde-3- 91.2 0.23 8E-06 46.8 5.4 32 175-209 92-125 (337)
305 2aef_A Calcium-gated potassium 90.6 0.59 2E-05 40.5 7.0 77 132-210 9-105 (234)
306 2egg_A AROE, shikimate 5-dehyd 90.4 0.41 1.4E-05 43.9 6.1 107 131-242 140-270 (297)
307 2yv3_A Aspartate-semialdehyde 90.3 0.16 5.5E-06 47.7 3.3 74 133-212 1-94 (331)
308 2eez_A Alanine dehydrogenase; 90.3 0.38 1.3E-05 45.3 5.9 75 130-209 164-265 (369)
309 3ngx_A Bifunctional protein fo 90.1 0.4 1.4E-05 44.3 5.8 66 130-209 148-221 (276)
310 2x5j_O E4PDH, D-erythrose-4-ph 90.1 0.25 8.7E-06 46.6 4.5 34 176-210 92-125 (339)
311 3b1j_A Glyceraldehyde 3-phosph 90.0 0.25 8.5E-06 46.7 4.4 21 176-196 91-111 (339)
312 1gad_O D-glyceraldehyde-3-phos 89.9 0.4 1.4E-05 45.2 5.7 36 175-213 87-122 (330)
313 3l07_A Bifunctional protein fo 89.9 0.56 1.9E-05 43.5 6.6 65 131-209 160-232 (285)
314 2d2i_A Glyceraldehyde 3-phosph 89.8 0.24 8.3E-06 47.7 4.2 33 176-209 91-123 (380)
315 4h7p_A Malate dehydrogenase; s 89.3 0.98 3.3E-05 42.7 7.9 52 165-216 89-156 (345)
316 1rm4_O Glyceraldehyde 3-phosph 89.0 0.4 1.4E-05 45.3 5.0 34 176-212 91-124 (337)
317 3cmc_O GAPDH, glyceraldehyde-3 88.9 0.3 1E-05 46.0 4.1 32 176-210 88-121 (334)
318 2c2x_A Methylenetetrahydrofola 88.8 0.78 2.7E-05 42.4 6.7 67 130-209 156-231 (281)
319 1leh_A Leucine dehydrogenase; 88.7 0.51 1.7E-05 45.0 5.6 98 130-236 171-285 (364)
320 4a26_A Putative C-1-tetrahydro 88.7 0.59 2E-05 43.7 5.8 65 131-209 164-238 (300)
321 3p2o_A Bifunctional protein fo 88.6 0.68 2.3E-05 42.9 6.2 65 131-209 159-231 (285)
322 1edz_A 5,10-methylenetetrahydr 88.5 0.58 2E-05 44.0 5.7 77 130-211 175-276 (320)
323 1a4i_A Methylenetetrahydrofola 88.2 0.98 3.4E-05 42.2 6.9 66 131-209 164-236 (301)
324 4a5o_A Bifunctional protein fo 87.9 0.84 2.9E-05 42.3 6.3 65 131-209 160-232 (286)
325 1b0a_A Protein (fold bifunctio 87.8 0.75 2.6E-05 42.7 5.9 66 131-209 158-230 (288)
326 1b8p_A Protein (malate dehydro 87.5 1.6 5.5E-05 40.4 8.1 49 167-215 74-138 (329)
327 2axq_A Saccharopine dehydrogen 86.7 0.99 3.4E-05 44.2 6.4 75 131-209 22-118 (467)
328 3o8q_A Shikimate 5-dehydrogena 85.2 0.71 2.4E-05 42.2 4.2 107 131-242 125-252 (281)
329 2ph5_A Homospermidine synthase 85.1 2 6.7E-05 42.6 7.6 77 132-211 13-115 (480)
330 3ff4_A Uncharacterized protein 84.7 0.27 9.3E-06 39.7 1.0 87 132-223 4-102 (122)
331 4g65_A TRK system potassium up 84.7 1.4 4.7E-05 43.0 6.3 65 131-196 2-88 (461)
332 4ina_A Saccharopine dehydrogen 84.1 0.46 1.6E-05 45.4 2.5 63 132-195 1-95 (405)
333 3ond_A Adenosylhomocysteinase; 83.6 2 6.8E-05 42.6 6.9 74 131-210 264-352 (488)
334 1hdg_O Holo-D-glyceraldehyde-3 83.3 0.95 3.3E-05 42.6 4.3 32 176-210 89-122 (332)
335 3lk7_A UDP-N-acetylmuramoylala 83.3 8.9 0.0003 36.8 11.3 53 131-184 8-80 (451)
336 1p77_A Shikimate 5-dehydrogena 83.0 0.87 3E-05 41.0 3.7 77 131-210 118-214 (272)
337 5mdh_A Malate dehydrogenase; o 82.9 1.6 5.5E-05 40.8 5.7 51 165-215 68-134 (333)
338 1hye_A L-lactate/malate dehydr 82.7 1.2 4.2E-05 40.9 4.7 95 133-231 1-146 (313)
339 4b4u_A Bifunctional protein fo 80.8 3.6 0.00012 38.4 7.2 68 131-214 178-253 (303)
340 1nyt_A Shikimate 5-dehydrogena 80.1 2.3 7.9E-05 38.1 5.5 77 132-210 119-214 (271)
341 2csu_A 457AA long hypothetical 79.6 1.3 4.4E-05 43.2 3.9 79 132-213 8-99 (457)
342 1ff9_A Saccharopine reductase; 79.6 2.4 8.3E-05 41.1 5.8 60 132-192 3-84 (450)
343 3dfz_A SIRC, precorrin-2 dehyd 79.5 6.2 0.00021 34.9 8.0 67 130-197 29-112 (223)
344 1c1d_A L-phenylalanine dehydro 79.3 3.8 0.00013 38.8 7.0 77 130-213 173-264 (355)
345 3gd5_A Otcase, ornithine carba 79.2 3.4 0.00012 38.8 6.5 55 129-184 154-233 (323)
346 4ep1_A Otcase, ornithine carba 78.4 3.7 0.00013 38.8 6.5 55 129-184 176-255 (340)
347 2g82_O GAPDH, glyceraldehyde-3 78.2 1.5 5.1E-05 41.3 3.7 32 176-210 86-119 (331)
348 3ius_A Uncharacterized conserv 78.1 3.6 0.00012 35.9 6.0 55 131-186 4-73 (286)
349 1pjc_A Protein (L-alanine dehy 77.3 2.1 7.3E-05 40.0 4.5 74 132-210 167-267 (361)
350 3e8x_A Putative NAD-dependent 77.3 5.4 0.00019 33.8 6.8 56 130-186 19-94 (236)
351 1pvv_A Otcase, ornithine carba 77.3 4.2 0.00014 38.0 6.5 56 128-184 151-231 (315)
352 1jw9_B Molybdopterin biosynthe 76.5 2.8 9.6E-05 37.2 4.9 25 171-195 116-140 (249)
353 3jyo_A Quinate/shikimate dehyd 76.1 3.2 0.00011 37.8 5.3 107 132-242 127-259 (283)
354 3ew7_A LMO0794 protein; Q8Y8U8 76.1 4.9 0.00017 33.3 6.0 53 133-186 1-71 (221)
355 3hn7_A UDP-N-acetylmuramate-L- 75.2 4.7 0.00016 39.7 6.6 58 131-188 18-94 (524)
356 1vm6_A DHPR, dihydrodipicolina 74.7 6.3 0.00021 35.3 6.6 76 132-218 12-92 (228)
357 3a06_A 1-deoxy-D-xylulose 5-ph 74.3 6.4 0.00022 37.8 6.9 23 175-197 84-107 (376)
358 3e48_A Putative nucleoside-dip 74.2 6.5 0.00022 34.3 6.6 53 133-186 1-75 (289)
359 1npy_A Hypothetical shikimate 74.2 4.5 0.00015 36.6 5.7 104 132-242 119-243 (271)
360 3pwz_A Shikimate dehydrogenase 73.4 4.3 0.00015 36.8 5.3 107 131-242 119-246 (272)
361 3phh_A Shikimate dehydrogenase 73.3 3.8 0.00013 37.3 4.9 103 132-243 118-239 (269)
362 1r0k_A 1-deoxy-D-xylulose 5-ph 73.2 5.6 0.00019 38.2 6.3 16 132-147 4-20 (388)
363 3qvo_A NMRA family protein; st 72.5 5.1 0.00017 34.2 5.4 59 131-190 22-102 (236)
364 3r6d_A NAD-dependent epimerase 72.4 6.1 0.00021 33.1 5.8 58 131-189 3-86 (221)
365 1zud_1 Adenylyltransferase THI 72.1 4.4 0.00015 36.0 5.0 20 130-150 26-45 (251)
366 2i6u_A Otcase, ornithine carba 72.1 6.9 0.00023 36.4 6.5 56 128-184 144-225 (307)
367 4hv4_A UDP-N-acetylmuramate--L 72.0 6.3 0.00021 38.5 6.5 57 132-188 22-95 (494)
368 1vlv_A Otcase, ornithine carba 71.4 7.3 0.00025 36.6 6.5 55 129-184 164-244 (325)
369 1duv_G Octase-1, ornithine tra 71.1 7.3 0.00025 36.6 6.5 55 129-184 152-232 (333)
370 3fpf_A Mtnas, putative unchara 70.3 16 0.00054 33.8 8.5 76 132-207 123-219 (298)
371 3rui_A Ubiquitin-like modifier 70.2 5.6 0.00019 37.6 5.4 37 171-209 134-170 (340)
372 3d6n_B Aspartate carbamoyltran 68.9 7 0.00024 36.1 5.7 57 129-187 143-215 (291)
373 4gsl_A Ubiquitin-like modifier 68.8 5.3 0.00018 40.7 5.3 37 171-209 426-462 (615)
374 2ef0_A Ornithine carbamoyltran 68.4 7.1 0.00024 36.2 5.7 55 129-184 151-221 (301)
375 2w37_A Ornithine carbamoyltran 67.9 9.3 0.00032 36.4 6.5 55 129-184 173-253 (359)
376 3czc_A RMPB; alpha/beta sandwi 67.9 23 0.00077 27.4 7.8 81 131-221 17-104 (110)
377 1dxh_A Ornithine carbamoyltran 67.4 8.4 0.00029 36.3 6.0 55 129-184 152-232 (335)
378 3mwd_B ATP-citrate synthase; A 67.1 8.8 0.0003 36.1 6.1 82 132-216 10-118 (334)
379 3dhn_A NAD-dependent epimerase 65.9 3.3 0.00011 34.8 2.7 55 132-187 4-78 (227)
380 1y8q_A Ubiquitin-like 1 activa 65.4 12 0.00041 34.9 6.7 26 170-195 119-144 (346)
381 4a8t_A Putrescine carbamoyltra 65.3 9.7 0.00033 35.9 6.0 53 129-183 172-249 (339)
382 3h2z_A Mannitol-1-phosphate 5- 65.2 5 0.00017 38.4 4.1 43 172-214 75-125 (382)
383 4a8p_A Putrescine carbamoyltra 64.0 10 0.00035 36.0 6.0 52 129-182 150-226 (355)
384 1lnq_A MTHK channels, potassiu 63.8 16 0.00055 33.1 7.2 76 133-209 116-210 (336)
385 3nkl_A UDP-D-quinovosamine 4-d 62.0 14 0.00047 28.8 5.6 21 132-153 4-24 (141)
386 3vh1_A Ubiquitin-like modifier 61.9 8.4 0.00029 39.1 5.2 26 171-196 427-452 (598)
387 2f00_A UDP-N-acetylmuramate--L 61.5 14 0.00048 35.8 6.6 53 132-184 19-86 (491)
388 1p3d_A UDP-N-acetylmuramate--a 61.2 14 0.00048 35.6 6.5 53 132-184 18-85 (475)
389 1tvm_A PTS system, galactitol- 60.9 14 0.00046 28.9 5.3 55 131-187 20-80 (113)
390 1vl6_A Malate oxidoreductase; 60.4 18 0.00061 34.8 6.9 79 130-213 190-297 (388)
391 2ark_A Flavodoxin; FMN, struct 60.0 17 0.00059 30.0 6.1 64 132-198 4-80 (188)
392 3csu_A Protein (aspartate carb 60.0 15 0.00052 34.1 6.3 55 129-184 151-229 (310)
393 3dqp_A Oxidoreductase YLBE; al 59.7 5.5 0.00019 33.3 3.0 53 133-186 1-73 (219)
394 3b6i_A Flavoprotein WRBA; flav 59.4 15 0.00051 30.2 5.6 27 171-197 63-95 (198)
395 3two_A Mannitol dehydrogenase; 59.3 14 0.00049 33.6 5.9 66 132-198 177-257 (348)
396 4gx0_A TRKA domain protein; me 59.0 18 0.00061 35.4 6.9 77 133-210 349-442 (565)
397 2a5l_A Trp repressor binding p 58.7 25 0.00087 28.8 7.0 27 171-197 66-98 (200)
398 3gpi_A NAD-dependent epimerase 58.6 11 0.00036 32.9 4.7 20 132-152 3-22 (286)
399 3st7_A Capsular polysaccharide 58.5 3.1 0.00011 38.0 1.2 44 133-184 1-54 (369)
400 4ekn_B Aspartate carbamoyltran 58.5 16 0.00055 33.8 6.1 55 129-184 148-226 (306)
401 4e7p_A Response regulator; DNA 57.7 60 0.0021 24.7 10.6 93 121-221 9-112 (150)
402 1oth_A Protein (ornithine tran 57.5 13 0.00046 34.6 5.4 55 129-184 152-231 (321)
403 1qv9_A F420-dependent methylen 57.2 13 0.00043 33.9 4.9 15 132-146 3-17 (283)
404 3tpf_A Otcase, ornithine carba 56.8 20 0.00069 33.2 6.5 56 128-184 141-222 (307)
405 2pln_A HP1043, response regula 56.8 58 0.002 24.2 11.4 91 121-221 7-104 (137)
406 3m2p_A UDP-N-acetylglucosamine 56.5 5.6 0.00019 35.2 2.6 54 131-185 1-71 (311)
407 3fbt_A Chorismate mutase and s 56.2 8.4 0.00029 35.1 3.7 106 132-243 122-245 (282)
408 1y7t_A Malate dehydrogenase; N 56.1 10 0.00035 34.5 4.3 19 132-151 4-23 (327)
409 3hzh_A Chemotaxis response reg 55.4 69 0.0024 24.7 11.0 84 131-222 35-130 (157)
410 4gud_A Imidazole glycerol phos 54.8 13 0.00045 31.3 4.6 42 133-184 3-48 (211)
411 4f2g_A Otcase 1, ornithine car 54.5 16 0.00055 33.9 5.4 55 129-184 151-224 (309)
412 1ml4_A Aspartate transcarbamoy 54.1 20 0.00068 33.2 6.0 55 129-184 152-229 (308)
413 1qyc_A Phenylcoumaran benzylic 53.6 22 0.00076 31.0 6.0 54 132-186 4-87 (308)
414 2l2q_A PTS system, cellobiose- 53.3 17 0.00057 28.1 4.5 56 132-190 4-65 (109)
415 3h2s_A Putative NADH-flavin re 53.0 28 0.00095 28.7 6.3 53 133-186 1-72 (224)
416 3c1o_A Eugenol synthase; pheny 52.9 20 0.00069 31.6 5.7 65 131-196 3-100 (321)
417 2x5o_A UDP-N-acetylmuramoylala 52.9 13 0.00043 35.5 4.5 53 130-184 3-72 (439)
418 2r6j_A Eugenol synthase 1; phe 52.8 24 0.00081 31.1 6.1 64 132-196 11-102 (318)
419 4amu_A Ornithine carbamoyltran 52.7 25 0.00084 33.5 6.4 54 130-184 178-259 (365)
420 1ydg_A Trp repressor binding p 52.6 28 0.00096 29.1 6.3 25 172-196 74-104 (211)
421 3nbm_A PTS system, lactose-spe 52.2 15 0.00053 28.7 4.2 63 131-196 5-73 (108)
422 3sds_A Ornithine carbamoyltran 52.0 29 0.001 32.8 6.9 54 130-184 186-266 (353)
423 4id9_A Short-chain dehydrogena 51.8 14 0.00047 33.0 4.4 56 129-185 16-86 (347)
424 1fy2_A Aspartyl dipeptidase; s 51.8 12 0.00043 32.6 4.0 83 132-215 31-125 (229)
425 2qrj_A Saccharopine dehydrogen 51.3 16 0.00053 35.2 4.9 67 132-210 214-300 (394)
426 3h5n_A MCCB protein; ubiquitin 50.1 30 0.001 32.3 6.6 17 130-146 116-132 (353)
427 3orq_A N5-carboxyaminoimidazol 50.0 13 0.00045 34.5 4.1 21 131-152 11-31 (377)
428 2zki_A 199AA long hypothetical 49.9 38 0.0013 27.8 6.6 26 171-196 65-96 (199)
429 3tfw_A Putative O-methyltransf 49.3 72 0.0025 27.3 8.6 32 176-207 136-167 (248)
430 3eth_A Phosphoribosylaminoimid 49.2 10 0.00035 35.5 3.1 19 132-151 1-19 (355)
431 3rih_A Short chain dehydrogena 48.8 37 0.0013 30.3 6.7 35 177-211 91-128 (293)
432 2vzf_A NADH-dependent FMN redu 48.4 25 0.00087 29.3 5.3 16 172-187 65-80 (197)
433 3rp8_A Flavoprotein monooxygen 47.9 11 0.00037 34.8 3.1 20 132-152 23-42 (407)
434 1pg5_A Aspartate carbamoyltran 47.3 33 0.0011 31.6 6.2 55 129-184 146-221 (299)
435 3l4e_A Uncharacterized peptida 47.3 9.2 0.00031 33.1 2.4 82 132-214 27-124 (206)
436 3tnl_A Shikimate dehydrogenase 47.2 17 0.00058 33.6 4.3 107 131-242 153-293 (315)
437 3uog_A Alcohol dehydrogenase; 47.2 21 0.00072 32.7 5.0 14 132-145 190-203 (363)
438 2x4g_A Nucleoside-diphosphate- 47.2 27 0.00094 30.8 5.6 54 131-185 12-86 (342)
439 1gtm_A Glutamate dehydrogenase 46.4 14 0.00049 35.6 3.8 19 130-149 210-228 (419)
440 4hb9_A Similarities with proba 46.0 12 0.0004 33.9 3.0 19 133-152 2-20 (412)
441 3d7n_A Flavodoxin, WRBA-like p 45.8 18 0.00061 30.2 3.9 26 172-197 50-81 (193)
442 3pff_A ATP-citrate synthase; p 45.8 26 0.0009 36.9 5.9 54 162-216 548-604 (829)
443 1tt5_A APPBP1, amyloid protein 45.7 27 0.00094 34.6 5.8 25 171-195 119-143 (531)
444 2gas_A Isoflavone reductase; N 45.7 22 0.00075 31.0 4.7 55 132-187 2-87 (307)
445 1hdo_A Biliverdin IX beta redu 45.7 27 0.00091 28.2 4.9 52 133-185 4-76 (206)
446 1qyd_A Pinoresinol-lariciresin 45.3 41 0.0014 29.3 6.4 54 132-186 4-86 (313)
447 2fk8_A Methoxy mycolic acid sy 44.7 81 0.0028 27.7 8.4 45 168-212 147-197 (318)
448 1e2b_A Enzyme IIB-cellobiose; 44.0 35 0.0012 26.3 5.0 52 132-187 3-61 (106)
449 2nvu_B Maltose binding protein 43.2 47 0.0016 34.1 7.3 26 170-195 494-519 (805)
450 1p0f_A NADP-dependent alcohol 43.2 43 0.0015 30.6 6.5 14 132-145 192-205 (373)
451 3i6i_A Putative leucoanthocyan 42.8 38 0.0013 30.3 5.9 55 132-187 10-94 (346)
452 1ag9_A Flavodoxin; electron tr 42.8 1.3E+02 0.0045 24.2 10.3 27 172-198 41-74 (175)
453 1y8q_B Anthracycline-, ubiquit 42.6 43 0.0015 34.2 6.7 25 171-195 103-127 (640)
454 3e05_A Precorrin-6Y C5,15-meth 42.2 96 0.0033 25.2 7.9 35 175-209 107-142 (204)
455 3q98_A Transcarbamylase; rossm 42.1 41 0.0014 32.3 6.3 24 161-184 249-274 (399)
456 3t4e_A Quinate/shikimate dehyd 41.9 23 0.0008 32.6 4.3 108 131-242 147-287 (312)
457 3hm2_A Precorrin-6Y C5,15-meth 41.8 88 0.003 24.4 7.4 35 175-210 93-128 (178)
458 4h31_A Otcase, ornithine carba 41.8 45 0.0015 31.4 6.4 54 129-183 178-257 (358)
459 4b4o_A Epimerase family protei 41.6 23 0.0008 30.9 4.2 18 133-151 1-19 (298)
460 1tt5_B Ubiquitin-activating en 41.2 27 0.00092 33.8 4.8 25 171-195 124-148 (434)
461 3i3l_A Alkylhalidase CMLS; fla 40.9 15 0.00052 36.7 3.1 33 119-152 7-42 (591)
462 2yfk_A Aspartate/ornithine car 40.8 42 0.0015 32.4 6.1 24 161-184 246-271 (418)
463 1vkr_A Mannitol-specific PTS s 40.7 29 0.001 27.6 4.3 52 132-185 13-68 (125)
464 2q62_A ARSH; alpha/beta, flavo 39.9 40 0.0014 29.8 5.5 15 172-186 94-108 (247)
465 3uko_A Alcohol dehydrogenase c 39.5 50 0.0017 30.3 6.3 14 132-145 194-207 (378)
466 3sc6_A DTDP-4-dehydrorhamnose 39.3 20 0.00069 30.9 3.3 46 132-185 5-65 (287)
467 1e3i_A Alcohol dehydrogenase, 39.2 54 0.0018 30.0 6.4 14 132-145 196-209 (376)
468 3aog_A Glutamate dehydrogenase 38.9 43 0.0015 32.6 5.8 98 130-235 233-363 (440)
469 2wm3_A NMRA-like family domain 38.1 49 0.0017 28.7 5.7 53 132-185 5-81 (299)
470 2jhf_A Alcohol dehydrogenase E 38.1 61 0.0021 29.6 6.6 14 132-145 192-205 (374)
471 1ryi_A Glycine oxidase; flavop 37.7 17 0.00057 32.8 2.6 19 132-151 17-35 (382)
472 1pjq_A CYSG, siroheme synthase 37.1 78 0.0027 30.4 7.4 59 130-189 10-85 (457)
473 2lnd_A De novo designed protei 36.9 1.1E+02 0.0036 23.3 6.5 77 177-269 28-104 (112)
474 2m1z_A LMO0427 protein; homolo 36.4 71 0.0024 25.0 5.8 16 172-187 53-68 (106)
475 1nvt_A Shikimate 5'-dehydrogen 36.4 30 0.001 30.8 4.1 78 131-210 127-230 (287)
476 3h9e_O Glyceraldehyde-3-phosph 36.3 19 0.00066 34.0 2.8 20 131-151 6-25 (346)
477 2ep7_A GAPDH, glyceraldehyde-3 36.3 19 0.00064 34.0 2.8 19 132-151 2-20 (342)
478 3oh8_A Nucleoside-diphosphate 36.2 8.7 0.0003 37.3 0.5 53 132-185 147-210 (516)
479 3grf_A Ornithine carbamoyltran 36.1 73 0.0025 29.7 6.8 22 162-183 218-241 (328)
480 1uuf_A YAHK, zinc-type alcohol 36.1 31 0.0011 31.8 4.3 65 132-197 195-279 (369)
481 2h6e_A ADH-4, D-arabinose 1-de 35.9 37 0.0012 30.7 4.6 14 132-145 171-184 (344)
482 2tmg_A Protein (glutamate dehy 35.8 41 0.0014 32.5 5.1 61 169-235 277-338 (415)
483 3hja_A GAPDH, glyceraldehyde-3 35.4 20 0.00068 34.1 2.8 19 132-151 21-39 (356)
484 1cdo_A Alcohol dehydrogenase; 34.8 73 0.0025 29.0 6.6 14 132-145 193-206 (374)
485 2fzw_A Alcohol dehydrogenase c 34.7 61 0.0021 29.5 6.0 14 132-145 191-204 (373)
486 2rir_A Dipicolinate synthase, 34.7 18 0.00061 32.5 2.3 52 131-183 6-67 (300)
487 1ka9_H Imidazole glycerol phos 34.2 37 0.0013 28.4 4.1 45 131-184 1-48 (200)
488 1vl8_A Gluconate 5-dehydrogena 34.0 81 0.0028 27.3 6.5 85 119-211 8-108 (267)
489 1l3i_A Precorrin-6Y methyltran 33.5 95 0.0033 24.3 6.4 36 175-210 99-135 (192)
490 3qj4_A Renalase; FAD/NAD(P)-bi 33.1 21 0.00073 31.9 2.5 20 132-152 1-20 (342)
491 3grz_A L11 mtase, ribosomal pr 32.9 28 0.00096 28.5 3.1 48 175-222 124-172 (205)
492 1yvv_A Amine oxidase, flavin-c 32.9 27 0.00092 30.7 3.1 20 132-152 2-21 (336)
493 2gpy_A O-methyltransferase; st 32.9 75 0.0026 26.5 5.9 34 175-208 125-159 (233)
494 4ej6_A Putative zinc-binding d 32.8 33 0.0011 31.6 3.8 14 132-145 183-196 (370)
495 3ip1_A Alcohol dehydrogenase, 32.4 75 0.0026 29.5 6.3 14 132-145 214-227 (404)
496 3cmm_A Ubiquitin-activating en 32.4 59 0.002 35.0 6.1 17 130-146 25-41 (1015)
497 3aoe_E Glutamate dehydrogenase 32.4 77 0.0026 30.6 6.4 55 175-235 288-342 (419)
498 3s2e_A Zinc-containing alcohol 32.3 48 0.0016 29.8 4.8 14 132-145 167-180 (340)
499 1obf_O Glyceraldehyde 3-phosph 32.1 22 0.00076 33.4 2.5 19 132-151 1-19 (335)
500 3slg_A PBGP3 protein; structur 32.0 1.5E+02 0.005 26.4 8.1 21 130-151 22-43 (372)
No 1
>3tri_A Pyrroline-5-carboxylate reductase; amino acid biosynthesis, oxidoreductase; HET: NAP; 2.50A {Coxiella burnetii}
Probab=99.97 E-value=3.3e-30 Score=238.87 Aligned_cols=169 Identities=31% Similarity=0.444 Sum_probs=149.5
Q ss_pred CCcEEEEcCChhhHHHHHHHHh-------------hcHH---HHhh-CCCeEecChHHhhcCCCEEEEeeCCccHHHHHH
Q psy6714 132 RSDKQIAGTTERGPGALIASLN-------------IVSK---ATGT-MGAKITFDNKEVTLNSEVIILAVKPHIVPVALN 194 (303)
Q Consensus 132 ~mkIgIIGlG~MG~~~La~al~-------------r~~e---~l~e-~Gv~v~~d~~eav~~ADIVILAVpP~~v~~VL~ 194 (303)
+|||+|||+|+||.+ ++..+. ++.+ .+.+ +|+.+..++.++++++|+||+||||+.+.++++
T Consensus 3 ~~~I~iIG~G~mG~a-ia~~l~~~g~~~~~V~v~dr~~~~~~~l~~~~gi~~~~~~~~~~~~aDvVilav~p~~~~~vl~ 81 (280)
T 3tri_A 3 TSNITFIGGGNMARN-IVVGLIANGYDPNRICVTNRSLDKLDFFKEKCGVHTTQDNRQGALNADVVVLAVKPHQIKMVCE 81 (280)
T ss_dssp CSCEEEESCSHHHHH-HHHHHHHTTCCGGGEEEECSSSHHHHHHHHTTCCEEESCHHHHHSSCSEEEECSCGGGHHHHHH
T ss_pred CCEEEEEcccHHHHH-HHHHHHHCCCCCCeEEEEeCCHHHHHHHHHHcCCEEeCChHHHHhcCCeEEEEeCHHHHHHHHH
Confidence 589999999999994 554421 1112 2333 599888899999999999999999999999999
Q ss_pred hhccc-cCCCCEEEEecCCCcHHHHHhhCCCCCceEEEecCcHHhhhCCcEEEEeCCCCCHHHHHHHHHHHHhcCCcEEc
Q psy6714 195 DIKPV-FNESNLLISVAGGVPIKNMEQALPKNSRIIRAMPNTPALVRQGASVFVRGSSASDQDAQTVINLFKSVGTCEEV 273 (303)
Q Consensus 195 eI~~~-L~~g~IVVSiaaGV~ie~L~~~l~~~~~VVr~mPn~p~~v~~G~til~~g~~~~~e~~e~V~~Lfs~iG~~v~v 273 (303)
++.++ ++++++|||+++|++++.|++.++.+.+++++|||+|..+++|++.++++...++++++.+++||+.+|.++++
T Consensus 82 ~l~~~~l~~~~iiiS~~agi~~~~l~~~l~~~~~vvr~mPn~p~~v~~g~~~l~~~~~~~~~~~~~v~~l~~~iG~~~~v 161 (280)
T 3tri_A 82 ELKDILSETKILVISLAVGVTTPLIEKWLGKASRIVRAMPNTPSSVRAGATGLFANETVDKDQKNLAESIMRAVGLVIWV 161 (280)
T ss_dssp HHHHHHHTTTCEEEECCTTCCHHHHHHHHTCCSSEEEEECCGGGGGTCEEEEEECCTTSCHHHHHHHHHHHGGGEEEEEC
T ss_pred HHHhhccCCCeEEEEecCCCCHHHHHHHcCCCCeEEEEecCChHHhcCccEEEEeCCCCCHHHHHHHHHHHHHCCCeEEE
Confidence 99988 87888999999999999999999866789999999999999999999988888999999999999999999888
Q ss_pred -CCCCchhhhhhccchHHHHHHHHHhhhh
Q psy6714 274 -PEYLLDGITGLSGSGPAYRYEVTSNEVI 301 (303)
Q Consensus 274 -dE~~~Da~tAlsGsgPAf~~~~ie~~~~ 301 (303)
+|++||++++++||||||+|+|+++|..
T Consensus 162 ~~E~~~d~~talsgsgpa~~~~~~eal~~ 190 (280)
T 3tri_A 162 SSEDQIEKIAALSGSGPAYIFLIMEALQE 190 (280)
T ss_dssp SSHHHHHHHHHHTTSHHHHHHHHHHHHHH
T ss_pred CCHHHhhHHHHHhccHHHHHHHHHHHHHH
Confidence 6899999999999999999999999863
No 2
>3gt0_A Pyrroline-5-carboxylate reductase; structural genomics, PSI-2, protein structure initiative, no structural genomics consortium, NESG; 2.00A {Bacillus cereus atcc 14579}
Probab=99.96 E-value=2.8e-28 Score=220.54 Aligned_cols=170 Identities=31% Similarity=0.553 Sum_probs=147.0
Q ss_pred CCCcEEEEcCChhhHHHHHHHHh--------------hcHHH---Hh-hCCCeEecChHHhhcCCCEEEEeeCCccHHHH
Q psy6714 131 NRSDKQIAGTTERGPGALIASLN--------------IVSKA---TG-TMGAKITFDNKEVTLNSEVIILAVKPHIVPVA 192 (303)
Q Consensus 131 ~~mkIgIIGlG~MG~~~La~al~--------------r~~e~---l~-e~Gv~v~~d~~eav~~ADIVILAVpP~~v~~V 192 (303)
++|||+|||+|+||.. ++..+. ++.++ +. ++|+....++.++++++|+||+||||+.+.++
T Consensus 1 M~~~i~iIG~G~mG~~-~a~~l~~~g~~~~~~V~~~~r~~~~~~~~~~~~g~~~~~~~~e~~~~aDvVilav~~~~~~~v 79 (247)
T 3gt0_A 1 MDKQIGFIGCGNMGMA-MIGGMINKNIVSSNQIICSDLNTANLKNASEKYGLTTTTDNNEVAKNADILILSIKPDLYASI 79 (247)
T ss_dssp CCCCEEEECCSHHHHH-HHHHHHHTTSSCGGGEEEECSCHHHHHHHHHHHCCEECSCHHHHHHHCSEEEECSCTTTHHHH
T ss_pred CCCeEEEECccHHHHH-HHHHHHhCCCCCCCeEEEEeCCHHHHHHHHHHhCCEEeCChHHHHHhCCEEEEEeCHHHHHHH
Confidence 3589999999999994 554321 12222 32 46898888999999999999999999999999
Q ss_pred HHhhccccCCCCEEEEecCCCcHHHHHhhCCCCCceEEEecCcHHhhhCCcEEEEeCCCCCHHHHHHHHHHHHhcCCcEE
Q psy6714 193 LNDIKPVFNESNLLISVAGGVPIKNMEQALPKNSRIIRAMPNTPALVRQGASVFVRGSSASDQDAQTVINLFKSVGTCEE 272 (303)
Q Consensus 193 L~eI~~~L~~g~IVVSiaaGV~ie~L~~~l~~~~~VVr~mPn~p~~v~~G~til~~g~~~~~e~~e~V~~Lfs~iG~~v~ 272 (303)
++++.++++++++|||+++|++.+.+++.++.+.+++++|||+|..++.|.+.+++++..++++++.++++|+.+|.+++
T Consensus 80 ~~~l~~~l~~~~~vvs~~~gi~~~~l~~~~~~~~~~v~~~p~~p~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~G~~~~ 159 (247)
T 3gt0_A 80 INEIKEIIKNDAIIVTIAAGKSIESTENAFNKKVKVVRVMPNTPALVGEGMSALCPNEMVTEKDLEDVLNIFNSFGQTEI 159 (247)
T ss_dssp C---CCSSCTTCEEEECSCCSCHHHHHHHHCSCCEEEEEECCGGGGGTCEEEEEEECTTCCHHHHHHHHHHHGGGEEEEE
T ss_pred HHHHHhhcCCCCEEEEecCCCCHHHHHHHhCCCCcEEEEeCChHHHHcCceEEEEeCCCCCHHHHHHHHHHHHhCCCEEE
Confidence 99999989889999999999999999998876678999999999999999999998888899999999999999999999
Q ss_pred cCCCCchhhhhhccchHHHHHHHHHhhhh
Q psy6714 273 VPEYLLDGITGLSGSGPAYRYEVTSNEVI 301 (303)
Q Consensus 273 vdE~~~Da~tAlsGsgPAf~~~~ie~~~~ 301 (303)
++|++||.+++++||+|+|+|.|+++|..
T Consensus 160 ~~e~~~d~~~a~~g~gpa~~~~~~eal~~ 188 (247)
T 3gt0_A 160 VSEKLMDVVTSVSGSSPAYVYMIIEAMAD 188 (247)
T ss_dssp CCGGGHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred eCHHHccHHHHHhccHHHHHHHHHHHHHH
Confidence 99999999999999999999999999864
No 3
>2izz_A Pyrroline-5-carboxylate reductase 1; amino-acid biosynthesis, NADP, oxidoreductase, proline biosy; HET: NAD; 1.95A {Homo sapiens} PDB: 2ger_A 2gr9_A* 2gra_A*
Probab=99.93 E-value=4.8e-25 Score=207.36 Aligned_cols=169 Identities=38% Similarity=0.613 Sum_probs=144.6
Q ss_pred CCCcEEEEcCChhhHHHHHHHH-h-------------hcH-----HHHhhCCCeEecChHHhhcCCCEEEEeeCCccHHH
Q psy6714 131 NRSDKQIAGTTERGPGALIASL-N-------------IVS-----KATGTMGAKITFDNKEVTLNSEVIILAVKPHIVPV 191 (303)
Q Consensus 131 ~~mkIgIIGlG~MG~~~La~al-~-------------r~~-----e~l~e~Gv~v~~d~~eav~~ADIVILAVpP~~v~~ 191 (303)
.+|||+|||+|+||.+ ++..+ + +.. +.+.+.|+.+..++.++++++|+||+||||+++.+
T Consensus 21 ~~mkI~iIG~G~mG~a-la~~L~~~G~~~~~~V~v~~r~~~~~~~~~l~~~G~~~~~~~~e~~~~aDvVilav~~~~~~~ 99 (322)
T 2izz_A 21 QSMSVGFIGAGQLAFA-LAKGFTAAGVLAAHKIMASSPDMDLATVSALRKMGVKLTPHNKETVQHSDVLFLAVKPHIIPF 99 (322)
T ss_dssp -CCCEEEESCSHHHHH-HHHHHHHTTSSCGGGEEEECSCTTSHHHHHHHHHTCEEESCHHHHHHHCSEEEECSCGGGHHH
T ss_pred CCCEEEEECCCHHHHH-HHHHHHHCCCCCcceEEEECCCccHHHHHHHHHcCCEEeCChHHHhccCCEEEEEeCHHHHHH
Confidence 3689999999999994 54432 1 111 23446699888888899999999999999999999
Q ss_pred HHHhhccccCCCCEEEEecCCCcHHHHHhhCCC---CCceEEEecCcHHhhhCCcEEEEeCCCCCHHHHHHHHHHHHhcC
Q psy6714 192 ALNDIKPVFNESNLLISVAGGVPIKNMEQALPK---NSRIIRAMPNTPALVRQGASVFVRGSSASDQDAQTVINLFKSVG 268 (303)
Q Consensus 192 VL~eI~~~L~~g~IVVSiaaGV~ie~L~~~l~~---~~~VVr~mPn~p~~v~~G~til~~g~~~~~e~~e~V~~Lfs~iG 268 (303)
++.++.+.++++++|||+++|++.+.+++.++. ..++++.||+.|..+..|.++++.++..+++..+.++++|+.+|
T Consensus 100 vl~~l~~~l~~~~ivvs~s~gi~~~~l~~~l~~~~~~~~vv~~~p~~p~~~~~g~~v~~~g~~~~~~~~~~v~~ll~~~G 179 (322)
T 2izz_A 100 ILDEIGADIEDRHIVVSCAAGVTISSIEKKLSAFRPAPRVIRCMTNTPVVVREGATVYATGTHAQVEDGRLMEQLLSSVG 179 (322)
T ss_dssp HHHHHGGGCCTTCEEEECCTTCCHHHHHHHHHTTSSCCEEEEEECCGGGGGTCEEEEEEECTTCCHHHHHHHHHHHHTTE
T ss_pred HHHHHHhhcCCCCEEEEeCCCCCHHHHHHHHhhcCCCCeEEEEeCCcHHHHcCCeEEEEeCCCCCHHHHHHHHHHHHhCC
Confidence 999999888889999999999999877776542 35799999999999998888888887777899999999999999
Q ss_pred CcEEcCCCCchhhhhhccchHHHHHHHHHhhh
Q psy6714 269 TCEEVPEYLLDGITGLSGSGPAYRYEVTSNEV 300 (303)
Q Consensus 269 ~~v~vdE~~~Da~tAlsGsgPAf~~~~ie~~~ 300 (303)
..++++|+.+|.+++++||+|+|++.|++++.
T Consensus 180 ~~~~~~e~~~~~~~a~~g~gpa~~~~~~eala 211 (322)
T 2izz_A 180 FCTEVEEDLIDAVTGLSGSGPAYAFTALDALA 211 (322)
T ss_dssp EEEECCGGGHHHHHHHTTTHHHHHHHHHHHHH
T ss_pred CEEEeCHHHHHHHHHHhcCHHHHHHHHHHHHH
Confidence 98889999999999999999999999999876
No 4
>2rcy_A Pyrroline carboxylate reductase; malaria, structural genomics, pyrroline reductase, oxidoredu structural genomics consortium, SGC; HET: NAP; 2.30A {Plasmodium falciparum}
Probab=99.91 E-value=2e-23 Score=188.57 Aligned_cols=167 Identities=31% Similarity=0.505 Sum_probs=141.9
Q ss_pred CCcEEEEcCChhhHHHHHHHHhhcH----HHH-------hhCCCeEecChHHhhcCCCEEEEeeCCccHHHHHHhhcccc
Q psy6714 132 RSDKQIAGTTERGPGALIASLNIVS----KAT-------GTMGAKITFDNKEVTLNSEVIILAVKPHIVPVALNDIKPVF 200 (303)
Q Consensus 132 ~mkIgIIGlG~MG~~~La~al~r~~----e~l-------~e~Gv~v~~d~~eav~~ADIVILAVpP~~v~~VL~eI~~~L 200 (303)
+|||+|||+|.||. .++..+.+.. ... ...|+.+..++.++++++|+||+|||++.+.+++.++.+.+
T Consensus 4 ~m~i~iiG~G~mG~-~~a~~l~~~g~~~~~~v~~~~~~~~~~g~~~~~~~~~~~~~~D~vi~~v~~~~~~~v~~~l~~~l 82 (262)
T 2rcy_A 4 NIKLGFMGLGQMGS-ALAHGIANANIIKKENLFYYGPSKKNTTLNYMSSNEELARHCDIIVCAVKPDIAGSVLNNIKPYL 82 (262)
T ss_dssp SSCEEEECCSHHHH-HHHHHHHHHTSSCGGGEEEECSSCCSSSSEECSCHHHHHHHCSEEEECSCTTTHHHHHHHSGGGC
T ss_pred CCEEEEECcCHHHH-HHHHHHHHCCCCCCCeEEEEeCCcccCceEEeCCHHHHHhcCCEEEEEeCHHHHHHHHHHHHHhc
Confidence 58999999999999 4655432211 111 01578777788888999999999999999999999999888
Q ss_pred CCCCEEEEecCCCcHHHHHhhCCCCCceEEEecCcHHhhhCCcEEEEeCCCCCHHHHHHHHHHHHhcCCcEEcCCCCchh
Q psy6714 201 NESNLLISVAGGVPIKNMEQALPKNSRIIRAMPNTPALVRQGASVFVRGSSASDQDAQTVINLFKSVGTCEEVPEYLLDG 280 (303)
Q Consensus 201 ~~g~IVVSiaaGV~ie~L~~~l~~~~~VVr~mPn~p~~v~~G~til~~g~~~~~e~~e~V~~Lfs~iG~~v~vdE~~~Da 280 (303)
++++||++++|++.+.+++.++...++++++|++|...+.|.+++++++..+++..+.++++|+.+|.+++++|+.||.
T Consensus 83 -~~~~vv~~~~gi~~~~l~~~~~~~~~~v~~~p~~p~~~~~g~~~~~~~~~~~~~~~~~~~~ll~~~G~~~~~~~~~~~~ 161 (262)
T 2rcy_A 83 -SSKLLISICGGLNIGKLEEMVGSENKIVWVMPNTPCLVGEGSFIYCSNKNVNSTDKKYVNDIFNSCGIIHEIKEKDMDI 161 (262)
T ss_dssp -TTCEEEECCSSCCHHHHHHHHCTTSEEEEEECCGGGGGTCEEEEEEECTTCCHHHHHHHHHHHHTSEEEEECCGGGHHH
T ss_pred -CCCEEEEECCCCCHHHHHHHhCCCCcEEEECCChHHHHcCCeEEEEeCCCCCHHHHHHHHHHHHhCCCEEEeCHHHccH
Confidence 6778999999999999999887544789999999999988877788877778999999999999999988889999999
Q ss_pred hhhhccchHHHHHHHHHhhh
Q psy6714 281 ITGLSGSGPAYRYEVTSNEV 300 (303)
Q Consensus 281 ~tAlsGsgPAf~~~~ie~~~ 300 (303)
++++++|+|+|++.+++++.
T Consensus 162 ~~a~~~~~~~~~~~~~~al~ 181 (262)
T 2rcy_A 162 ATAISGCGPAYVYLFIESLI 181 (262)
T ss_dssp HHHHTTSHHHHHHHHHHHHH
T ss_pred HHHHHccHHHHHHHHHHHHH
Confidence 99999999999999999875
No 5
>2ahr_A Putative pyrroline carboxylate reductase; pyrroline reductase, proline biosynthesis, NAD(P protein, rossmann fold, doain swapping; HET: NAP; 2.15A {Streptococcus pyogenes} SCOP: a.100.1.10 c.2.1.6 PDB: 2amf_A
Probab=99.88 E-value=2.8e-22 Score=181.34 Aligned_cols=165 Identities=22% Similarity=0.359 Sum_probs=139.0
Q ss_pred CCCcEEEEcCChhhHHHHHHHHh----------hcHHH---Hh-hCCCeEecChHHhhcCCCEEEEeeCCccHHHHHHhh
Q psy6714 131 NRSDKQIAGTTERGPGALIASLN----------IVSKA---TG-TMGAKITFDNKEVTLNSEVIILAVKPHIVPVALNDI 196 (303)
Q Consensus 131 ~~mkIgIIGlG~MG~~~La~al~----------r~~e~---l~-e~Gv~v~~d~~eav~~ADIVILAVpP~~v~~VL~eI 196 (303)
+||||+|||+|.||. .++..+. +..++ +. ++|+.+..+..++++++|+||+|||++.+.+++.++
T Consensus 2 ~~m~i~iiG~G~mG~-~~a~~l~~~g~~v~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~D~Vi~~v~~~~~~~v~~~l 80 (259)
T 2ahr_A 2 NAMKIGIIGVGKMAS-AIIKGLKQTPHELIISGSSLERSKEIAEQLALPYAMSHQDLIDQVDLVILGIKPQLFETVLKPL 80 (259)
T ss_dssp -CCEEEEECCSHHHH-HHHHHHTTSSCEEEEECSSHHHHHHHHHHHTCCBCSSHHHHHHTCSEEEECSCGGGHHHHHTTS
T ss_pred CccEEEEECCCHHHH-HHHHHHHhCCCeEEEECCCHHHHHHHHHHcCCEeeCCHHHHHhcCCEEEEEeCcHhHHHHHHHh
Confidence 478999999999999 4655432 22222 33 348877778888899999999999999999998776
Q ss_pred ccccCCCCEEEEecCCCcHHHHHhhCCCCCceEEEecCcHHhhhCCcEEEEeCCCCCHHHHHHHHHHHHhcCCcEEcCCC
Q psy6714 197 KPVFNESNLLISVAGGVPIKNMEQALPKNSRIIRAMPNTPALVRQGASVFVRGSSASDQDAQTVINLFKSVGTCEEVPEY 276 (303)
Q Consensus 197 ~~~L~~g~IVVSiaaGV~ie~L~~~l~~~~~VVr~mPn~p~~v~~G~til~~g~~~~~e~~e~V~~Lfs~iG~~v~vdE~ 276 (303)
. ++++||++.+|++.+.+++.++.+.++++.||++|..+++|.+.++.+...+++..+.++++|+.+|.+++++++
T Consensus 81 ~----~~~~vv~~~~~~~~~~l~~~~~~~~~~v~~~p~~~~~~~~g~~~i~~~~~~~~~~~~~~~~ll~~~G~~~~~~~~ 156 (259)
T 2ahr_A 81 H----FKQPIISMAAGISLQRLATFVGQDLPLLRIMPNMNAQILQSSTALTGNALVSQELQARVRDLTDSFGSTFDISEK 156 (259)
T ss_dssp C----CCSCEEECCTTCCHHHHHHHHCTTSCEEEEECCGGGGGTCEEEEEEECTTCCHHHHHHHHHHHHTTEEEEECCGG
T ss_pred c----cCCEEEEeCCCCCHHHHHHhcCCCCCEEEEcCCchHHHcCceEEEEcCCCCCHHHHHHHHHHHHhCCCEEEecHH
Confidence 4 677999999999999999888755589999999999998888877877777899999999999999988888999
Q ss_pred CchhhhhhccchHHHHHHHHHhhh
Q psy6714 277 LLDGITGLSGSGPAYRYEVTSNEV 300 (303)
Q Consensus 277 ~~Da~tAlsGsgPAf~~~~ie~~~ 300 (303)
+||.+++++||+|+|++.+++++.
T Consensus 157 ~~d~~~al~g~~~~~~~~~~~~la 180 (259)
T 2ahr_A 157 DFDTFTALAGSSPAYIYLFIEALA 180 (259)
T ss_dssp GHHHHHHHHTTHHHHHHHHHHHHH
T ss_pred HccHHHHHhccHHHHHHHHHHHHH
Confidence 999999999999999999998874
No 6
>1yqg_A Pyrroline-5-carboxylate reductase; structural genomics, PSI, structure initiative, midwest center for structural genomic oxidoreductase; 1.90A {Neisseria meningitidis} SCOP: a.100.1.10 c.2.1.6 PDB: 2ag8_A*
Probab=99.87 E-value=9e-22 Score=177.82 Aligned_cols=163 Identities=29% Similarity=0.440 Sum_probs=137.5
Q ss_pred CcEEEEcCChhhHHHHHHHHh-----------hcHH---HHhh-CCCeEecChHHhhcCCCEEEEeeCCccHHHHHHhhc
Q psy6714 133 SDKQIAGTTERGPGALIASLN-----------IVSK---ATGT-MGAKITFDNKEVTLNSEVIILAVKPHIVPVALNDIK 197 (303)
Q Consensus 133 mkIgIIGlG~MG~~~La~al~-----------r~~e---~l~e-~Gv~v~~d~~eav~~ADIVILAVpP~~v~~VL~eI~ 197 (303)
|||+|||+|.||.. ++..+. +..+ .+.+ +|+.+..++.+++ ++|+||+|||++++.+++.++.
T Consensus 1 m~i~iiG~G~mG~~-~a~~l~~~g~~~v~~~~r~~~~~~~~~~~~g~~~~~~~~~~~-~~D~vi~~v~~~~~~~v~~~l~ 78 (263)
T 1yqg_A 1 MNVYFLGGGNMAAA-VAGGLVKQGGYRIYIANRGAEKRERLEKELGVETSATLPELH-SDDVLILAVKPQDMEAACKNIR 78 (263)
T ss_dssp CEEEEECCSHHHHH-HHHHHHHHCSCEEEEECSSHHHHHHHHHHTCCEEESSCCCCC-TTSEEEECSCHHHHHHHHTTCC
T ss_pred CEEEEECchHHHHH-HHHHHHHCCCCeEEEECCCHHHHHHHHHhcCCEEeCCHHHHh-cCCEEEEEeCchhHHHHHHHhc
Confidence 78999999999994 554321 1122 2333 5888877888888 9999999999999999999887
Q ss_pred cccCCCCEEEEecCCCcHHHHHhhCCCCCceEEEecCcHHhhhCCcEEEEeCCCCCHHHHHHHHHHHHhcCCcEEcC-CC
Q psy6714 198 PVFNESNLLISVAGGVPIKNMEQALPKNSRIIRAMPNTPALVRQGASVFVRGSSASDQDAQTVINLFKSVGTCEEVP-EY 276 (303)
Q Consensus 198 ~~L~~g~IVVSiaaGV~ie~L~~~l~~~~~VVr~mPn~p~~v~~G~til~~g~~~~~e~~e~V~~Lfs~iG~~v~vd-E~ 276 (303)
+ + +++||++++|++.+.|++.++.+..+++++||+|..++.|.+.++.+...+++..+.+.++|+.+|..++++ ++
T Consensus 79 ~--~-~~ivv~~~~g~~~~~l~~~~~~~~~~v~~~~~~~~~~~~g~~~i~~~~~~~~~~~~~~~~l~~~~g~~~~~~~~~ 155 (263)
T 1yqg_A 79 T--N-GALVLSVAAGLSVGTLSRYLGGTRRIVRVMPNTPGKIGLGVSGMYAEAEVSETDRRIADRIMKSVGLTVWLDDEE 155 (263)
T ss_dssp C--T-TCEEEECCTTCCHHHHHHHTTSCCCEEEEECCGGGGGTCEEEEEECCTTSCHHHHHHHHHHHHTTEEEEECSSTT
T ss_pred c--C-CCEEEEecCCCCHHHHHHHcCCCCcEEEEcCCHHHHHcCceEEEEcCCCCCHHHHHHHHHHHHhCCCEEEeCChh
Confidence 6 4 889999999999999999887645789999999998888888777776668899999999999999888888 89
Q ss_pred CchhhhhhccchHHHHHHHHHhhh
Q psy6714 277 LLDGITGLSGSGPAYRYEVTSNEV 300 (303)
Q Consensus 277 ~~Da~tAlsGsgPAf~~~~ie~~~ 300 (303)
.||.++|++||+|+|++.+++++.
T Consensus 156 ~~~~~~al~g~~~~~~~~~~~~l~ 179 (263)
T 1yqg_A 156 KMHGITGISGSGPAYVFYLLDALQ 179 (263)
T ss_dssp HHHHHHHHTTSHHHHHHHHHHHHH
T ss_pred hccHHHHHHccHHHHHHHHHHHHH
Confidence 999999999999999999998764
No 7
>3fr7_A Putative ketol-acid reductoisomerase (OS05G057370 protein); rossmann fold, NADPH, knotted protein, branched-chain amino biosynthesis; 1.55A {Oryza sativa japonica group} PDB: 3fr8_A* 1qmg_A* 1yve_I*
Probab=99.83 E-value=8.7e-21 Score=188.64 Aligned_cols=170 Identities=12% Similarity=0.141 Sum_probs=137.8
Q ss_pred cCC-CcEEEEcCChhhHHHHHHHHhhc--------------------HHHHhhCCCeE----ecChHHhhcCCCEEEEee
Q psy6714 130 WNR-SDKQIAGTTERGPGALIASLNIV--------------------SKATGTMGAKI----TFDNKEVTLNSEVIILAV 184 (303)
Q Consensus 130 ~~~-mkIgIIGlG~MG~~~La~al~r~--------------------~e~l~e~Gv~v----~~d~~eav~~ADIVILAV 184 (303)
+.. +||||||+|+||.+ ++..+... .+.+.+.|+.+ ..++.+++++||+|||+|
T Consensus 51 L~GiKkIgIIGlGsMG~A-mA~nLr~s~~~~g~G~~ViVg~r~~sks~e~A~e~G~~v~d~ta~s~aEAa~~ADVVILaV 129 (525)
T 3fr7_A 51 FKGIKQIGVIGWGSQGPA-QAQNLRDSLAEAKSDIVVKIGLRKGSKSFDEARAAGFTEESGTLGDIWETVSGSDLVLLLI 129 (525)
T ss_dssp TTTCSEEEEECCTTHHHH-HHHHHHHHHHHTTCCCEEEEEECTTCSCHHHHHHTTCCTTTTCEEEHHHHHHHCSEEEECS
T ss_pred hcCCCEEEEEeEhHHHHH-HHHHHHhcccccCCCCEEEEEeCCchhhHHHHHHCCCEEecCCCCCHHHHHhcCCEEEECC
Confidence 345 89999999999994 55443221 12344678764 367889999999999999
Q ss_pred CCccHHHHHHhhccccCCCCEEEEecCCCcHHHHHh---hCCCCCceEEEecCcHHhh-------h-----CCcE-EEEe
Q psy6714 185 KPHIVPVALNDIKPVFNESNLLISVAGGVPIKNMEQ---ALPKNSRIIRAMPNTPALV-------R-----QGAS-VFVR 248 (303)
Q Consensus 185 pP~~v~~VL~eI~~~L~~g~IVVSiaaGV~ie~L~~---~l~~~~~VVr~mPn~p~~v-------~-----~G~t-il~~ 248 (303)
|+....+++.+|.++++++++ |++++|+++..+++ .++.+.+|+++|||+|..+ + .|++ +++.
T Consensus 130 P~~~~~eVl~eI~p~LK~GaI-Ls~AaGf~I~~le~~~i~~p~dv~VVrVmPNtPg~~VR~~y~~G~~~~g~Gv~~liAv 208 (525)
T 3fr7_A 130 SDAAQADNYEKIFSHMKPNSI-LGLSHGFLLGHLQSAGLDFPKNISVIAVCPKGMGPSVRRLYVQGKEINGAGINSSFAV 208 (525)
T ss_dssp CHHHHHHHHHHHHHHSCTTCE-EEESSSHHHHHHHHTTCCCCTTSEEEEEEESSCHHHHHHHHHHHTTSTTCSCCEEEEE
T ss_pred ChHHHHHHHHHHHHhcCCCCe-EEEeCCCCHHHHhhhcccCCCCCcEEEEecCCCchhHHHHHhcccccccCCccEEEEc
Confidence 999999999999999999987 78999999998886 5666789999999999876 4 6887 6666
Q ss_pred CCCCCHHHHHHHHHHHHhcCCcEE--------cCCCCchhhhhhccchHHHHHHHHHhhhh
Q psy6714 249 GSSASDQDAQTVINLFKSVGTCEE--------VPEYLLDGITGLSGSGPAYRYEVTSNEVI 301 (303)
Q Consensus 249 g~~~~~e~~e~V~~Lfs~iG~~v~--------vdE~~~Da~tAlsGsgPAf~~~~ie~~~~ 301 (303)
..+.+.++++.+..+|+.+|.... ..++.|+..++++||+|||+-..+|.++.
T Consensus 209 ~qd~tgea~e~alala~aiG~~~vieTtf~eE~e~DLfgeqtvLsG~~pAlieA~~d~lVe 269 (525)
T 3fr7_A 209 HQDVDGRATDVALGWSVALGSPFTFATTLEQEYKSDIFGERGILLGAVHGIVEALFRRYTE 269 (525)
T ss_dssp EECSSSCHHHHHHHHHHHTTCSEEEECCHHHHHHHHHHHHHTTTTHHHHHHHHHHHHHHHH
T ss_pred CCCCCHHHHHHHHHHHHHCCCCeeeeeeeeeehhHhhhhhHhhhcCcHHHHHHHHHHHHHH
Confidence 667788899999999999998633 12357888899999999999999998875
No 8
>3ggo_A Prephenate dehydrogenase; TYRA, HPP, NADH, alpha-beta, oxidoreductase; HET: NAI ENO; 2.15A {Aquifex aeolicus} PDB: 3ggg_D* 3ggp_A*
Probab=99.82 E-value=8.1e-20 Score=172.07 Aligned_cols=163 Identities=15% Similarity=0.189 Sum_probs=125.9
Q ss_pred CCCcEEEEcCChhhHHHHHHHHhh------------cH---HHHhhCCC--eEecChHH-hhcCCCEEEEeeCCccHHHH
Q psy6714 131 NRSDKQIAGTTERGPGALIASLNI------------VS---KATGTMGA--KITFDNKE-VTLNSEVIILAVKPHIVPVA 192 (303)
Q Consensus 131 ~~mkIgIIGlG~MG~~~La~al~r------------~~---e~l~e~Gv--~v~~d~~e-av~~ADIVILAVpP~~v~~V 192 (303)
+.|||+|||+|+||+ +++..+.. .. +.+.+.|+ ....++.+ ++++||+||+|||++.+.++
T Consensus 32 ~~~kI~IIG~G~mG~-slA~~l~~~G~~~~V~~~dr~~~~~~~a~~~G~~~~~~~~~~~~~~~~aDvVilavp~~~~~~v 110 (314)
T 3ggo_A 32 SMQNVLIVGVGFMGG-SFAKSLRRSGFKGKIYGYDINPESISKAVDLGIIDEGTTSIAKVEDFSPDFVMLSSPVRTFREI 110 (314)
T ss_dssp SCSEEEEESCSHHHH-HHHHHHHHTTCCSEEEEECSCHHHHHHHHHTTSCSEEESCTTGGGGGCCSEEEECSCGGGHHHH
T ss_pred CCCEEEEEeeCHHHH-HHHHHHHhCCCCCEEEEEECCHHHHHHHHHCCCcchhcCCHHHHhhccCCEEEEeCCHHHHHHH
Confidence 458999999999999 56655321 12 23456777 45678888 89999999999999999999
Q ss_pred HHhhccccCCCCEEEEecCCCc---HHHHHhhCCCCCceEEEecCcHHhhh----------CC-cEEEEeCCCCCHHHHH
Q psy6714 193 LNDIKPVFNESNLLISVAGGVP---IKNMEQALPKNSRIIRAMPNTPALVR----------QG-ASVFVRGSSASDQDAQ 258 (303)
Q Consensus 193 L~eI~~~L~~g~IVVSiaaGV~---ie~L~~~l~~~~~VVr~mPn~p~~v~----------~G-~til~~g~~~~~e~~e 258 (303)
++++.++++++++|+++ ++++ .+.+.+.++. .++..+|..+.+.. .| .+++++++..+++.++
T Consensus 111 l~~l~~~l~~~~iv~d~-~Svk~~~~~~~~~~l~~--~~v~~hPm~G~e~sG~~~A~~~Lf~g~~~il~~~~~~~~~~~~ 187 (314)
T 3ggo_A 111 AKKLSYILSEDATVTDQ-GSVKGKLVYDLENILGK--RFVGGHPIAGTEKSGVEYSLDNLYEGKKVILTPTKKTDKKRLK 187 (314)
T ss_dssp HHHHHHHSCTTCEEEEC-CSCCTHHHHHHHHHHGG--GEECEEECCCCCCCSGGGCCTTTTTTCEEEECCCTTSCHHHHH
T ss_pred HHHHhhccCCCcEEEEC-CCCcHHHHHHHHHhcCC--CEEecCcccCCcccchhhhhhhhhcCCEEEEEeCCCCCHHHHH
Confidence 99999989888877654 5665 3456666653 66777776543211 34 5677777777999999
Q ss_pred HHHHHHHhcCC-cEEcCCCCchhhhhhccchHHHHHHHHH
Q psy6714 259 TVINLFKSVGT-CEEVPEYLLDGITGLSGSGPAYRYEVTS 297 (303)
Q Consensus 259 ~V~~Lfs~iG~-~v~vdE~~~Da~tAlsGsgPAf~~~~ie 297 (303)
.++++|+.+|. ++++++++||.++|+++++|+|+++.+-
T Consensus 188 ~v~~l~~~~G~~v~~~~~~~hD~~~a~~s~lph~~a~~l~ 227 (314)
T 3ggo_A 188 LVKRVWEDVGGVVEYMSPELHDYVFGVVSHLPHAVAFALV 227 (314)
T ss_dssp HHHHHHHHTTCEEEECCHHHHHHHHHHHTHHHHHHHHHHH
T ss_pred HHHHHHHHcCCEEEEcCHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999997 5778999999999999999999966653
No 9
>3c24_A Putative oxidoreductase; YP_511008.1, structural genomics, center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE; 1.62A {Jannaschia SP}
Probab=99.81 E-value=5.2e-20 Score=169.32 Aligned_cols=167 Identities=14% Similarity=0.216 Sum_probs=131.5
Q ss_pred CCCcEEEEcC-ChhhHHHHHHHHh----------hcHH---HHhhCCCeEecChHHhhcCCCEEEEeeCCccHHHHHHhh
Q psy6714 131 NRSDKQIAGT-TERGPGALIASLN----------IVSK---ATGTMGAKITFDNKEVTLNSEVIILAVKPHIVPVALNDI 196 (303)
Q Consensus 131 ~~mkIgIIGl-G~MG~~~La~al~----------r~~e---~l~e~Gv~v~~d~~eav~~ADIVILAVpP~~v~~VL~eI 196 (303)
+||||+|||+ |.||. .++..+. +..+ .+.+.|+.. .++.++++++|+||+|||++.+.++++++
T Consensus 10 mmm~I~iIG~tG~mG~-~la~~l~~~g~~V~~~~r~~~~~~~~~~~g~~~-~~~~~~~~~aDvVi~av~~~~~~~v~~~l 87 (286)
T 3c24_A 10 GPKTVAILGAGGKMGA-RITRKIHDSAHHLAAIEIAPEGRDRLQGMGIPL-TDGDGWIDEADVVVLALPDNIIEKVAEDI 87 (286)
T ss_dssp CCCEEEEETTTSHHHH-HHHHHHHHSSSEEEEECCSHHHHHHHHHTTCCC-CCSSGGGGTCSEEEECSCHHHHHHHHHHH
T ss_pred cCCEEEEECCCCHHHH-HHHHHHHhCCCEEEEEECCHHHHHHHHhcCCCc-CCHHHHhcCCCEEEEcCCchHHHHHHHHH
Confidence 4679999999 99999 4555431 2222 344567655 36677889999999999999999999999
Q ss_pred ccccCCCCEEEEecCCCcHHHHHhhCCCCCceEEEecCcHHh--------hhCC-------cEEEEeCCCCCHHHHHHHH
Q psy6714 197 KPVFNESNLLISVAGGVPIKNMEQALPKNSRIIRAMPNTPAL--------VRQG-------ASVFVRGSSASDQDAQTVI 261 (303)
Q Consensus 197 ~~~L~~g~IVVSiaaGV~ie~L~~~l~~~~~VVr~mPn~p~~--------v~~G-------~til~~g~~~~~e~~e~V~ 261 (303)
.+.++++++||++++|.+.+.+.+..+ +..+++.||+.+.. ...| .+.++.....+++..+.++
T Consensus 88 ~~~l~~~~ivv~~s~~~~~~~l~~~~~-~~~~v~~~P~~~~~~~~~~~~~~~~g~l~~~~~~~~i~~~~~~~~~~~~~v~ 166 (286)
T 3c24_A 88 VPRVRPGTIVLILDAAAPYAGVMPERA-DITYFIGHPCHPPLFNDETDPAARTDYHGGIAKQAIVCALMQGPEEHYAIGA 166 (286)
T ss_dssp GGGSCTTCEEEESCSHHHHHTCSCCCT-TSEEEEEEECCSCSSCCCCSHHHHTCSSSSSSCEEEEEEEEESCTHHHHHHH
T ss_pred HHhCCCCCEEEECCCCchhHHHHhhhC-CCeEEecCCCCccccccccchhhccCcccccccceeeeeccCCCHHHHHHHH
Confidence 988888999999888887766665333 46789999998765 5666 3444333335788999999
Q ss_pred HHHHhcCC----cEEcCCCCchhh-hhhc-cchHHHHHHHHHhhh
Q psy6714 262 NLFKSVGT----CEEVPEYLLDGI-TGLS-GSGPAYRYEVTSNEV 300 (303)
Q Consensus 262 ~Lfs~iG~----~v~vdE~~~Da~-tAls-GsgPAf~~~~ie~~~ 300 (303)
++|+.+|. +++++++++|.+ ++++ +++++|++.++|+++
T Consensus 167 ~l~~~~G~~~~~~~~v~~~~~~~~~~a~~n~~~~~~~~~~~eal~ 211 (286)
T 3c24_A 167 DICETMWSPVTRTHRVTTEQLAILEPGLSEMVAMPFVETMVHAVD 211 (286)
T ss_dssp HHHHHHTCSEEEEEECCHHHHHHHTTHHHHTTHHHHHHHHHHHHH
T ss_pred HHHHHhcCCcceEEEeChhHhHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999998 688898899999 8887 899999999999875
No 10
>2pv7_A T-protein [includes: chorismate mutase (EC 5.4.99 and prephenate dehydrogenase (EC...; 1574749, chorismate mutase type II; HET: MSE TYR NAD; 2.00A {Haemophilus influenzae} SCOP: a.100.1.12 c.2.1.6
Probab=99.76 E-value=4.7e-19 Score=164.81 Aligned_cols=156 Identities=13% Similarity=0.104 Sum_probs=113.0
Q ss_pred CCcEEEEc-CChhhHHHHHHHHhhcHHHHhhCCCe--Ee-----cChHHhhcCCCEEEEeeCCccHHHHHHhhccccCCC
Q psy6714 132 RSDKQIAG-TTERGPGALIASLNIVSKATGTMGAK--IT-----FDNKEVTLNSEVIILAVKPHIVPVALNDIKPVFNES 203 (303)
Q Consensus 132 ~mkIgIIG-lG~MG~~~La~al~r~~e~l~e~Gv~--v~-----~d~~eav~~ADIVILAVpP~~v~~VL~eI~~~L~~g 203 (303)
++||+||| +|+||+ .++..+.. .|.. +. .++.+++++||+||||||++.+.+++.++.++++++
T Consensus 21 ~~~I~iIGg~G~mG~-~la~~l~~-------~G~~V~~~~~~~~~~~~~~~~~aDvVilavp~~~~~~vl~~l~~~l~~~ 92 (298)
T 2pv7_A 21 IHKIVIVGGYGKLGG-LFARYLRA-------SGYPISILDREDWAVAESILANADVVIVSVPINLTLETIERLKPYLTEN 92 (298)
T ss_dssp CCCEEEETTTSHHHH-HHHHHHHT-------TTCCEEEECTTCGGGHHHHHTTCSEEEECSCGGGHHHHHHHHGGGCCTT
T ss_pred CCEEEEEcCCCHHHH-HHHHHHHh-------CCCeEEEEECCcccCHHHHhcCCCEEEEeCCHHHHHHHHHHHHhhcCCC
Confidence 46899999 999999 57655432 2322 21 245678899999999999999999999999888888
Q ss_pred CEEEEecCCCcHHHHHhhCCCCCceEEEecCcHHh-----hhCC-cEEEEeCCCCCHHHHHHHHHHHHhcCCc-EEcCCC
Q psy6714 204 NLLISVAGGVPIKNMEQALPKNSRIIRAMPNTPAL-----VRQG-ASVFVRGSSASDQDAQTVINLFKSVGTC-EEVPEY 276 (303)
Q Consensus 204 ~IVVSiaaGV~ie~L~~~l~~~~~VVr~mPn~p~~-----v~~G-~til~~g~~~~~e~~e~V~~Lfs~iG~~-v~vdE~ 276 (303)
++ |+.+++++...++.+... .. .+++|++|+. ...| .++++++. +++..+.++++|+.+|.. ++++++
T Consensus 93 ~i-v~~~~svk~~~~~~~~~~-~~-~~~v~~hP~~g~~~~~~~g~~~~l~~~~--~~~~~~~v~~l~~~~G~~~~~~~~~ 167 (298)
T 2pv7_A 93 ML-LADLTSVKREPLAKMLEV-HT-GAVLGLHPMFGADIASMAKQVVVRCDGR--FPERYEWLLEQIQIWGAKIYQTNAT 167 (298)
T ss_dssp SE-EEECCSCCHHHHHHHHHH-CS-SEEEEEEECSCTTCSCCTTCEEEEEEEE--CGGGTHHHHHHHHHTTCEEEECCHH
T ss_pred cE-EEECCCCCcHHHHHHHHh-cC-CCEEeeCCCCCCCchhhcCCeEEEecCC--CHHHHHHHHHHHHHcCCEEEECCHH
Confidence 75 456678886544443221 11 2455555431 1123 45666653 677889999999999985 567889
Q ss_pred CchhhhhhccchHHHH-HHHHHhhh
Q psy6714 277 LLDGITGLSGSGPAYR-YEVTSNEV 300 (303)
Q Consensus 277 ~~Da~tAlsGsgPAf~-~~~ie~~~ 300 (303)
+||.+++++|++|+|+ |.|++++.
T Consensus 168 ~~d~~~a~~~~~p~~~a~~l~~~l~ 192 (298)
T 2pv7_A 168 EHDHNMTYIQALRHFSTFANGLHLS 192 (298)
T ss_dssp HHHHHHHHHTHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999995 67777664
No 11
>3ktd_A Prephenate dehydrogenase; structural genomics, joint center F structural genomics, JCSG, protein structure initiative; 2.60A {Corynebacterium glutamicum atcc 13032}
Probab=99.76 E-value=9.3e-19 Score=167.28 Aligned_cols=160 Identities=14% Similarity=0.052 Sum_probs=120.0
Q ss_pred CCcEEEEcCChhhHHHHHHHHh----------hcH---HHHhhCCCeEecChHHhhc----CCCEEEEeeCCccHHHHHH
Q psy6714 132 RSDKQIAGTTERGPGALIASLN----------IVS---KATGTMGAKITFDNKEVTL----NSEVIILAVKPHIVPVALN 194 (303)
Q Consensus 132 ~mkIgIIGlG~MG~~~La~al~----------r~~---e~l~e~Gv~v~~d~~eav~----~ADIVILAVpP~~v~~VL~ 194 (303)
.+||+|||+|+||+ +|+..+. +.. +.+.+.|+....++.++++ +||+||||||++.+.++++
T Consensus 8 ~~kIgIIG~G~mG~-slA~~L~~~G~~V~~~dr~~~~~~~a~~~G~~~~~~~~e~~~~a~~~aDlVilavP~~~~~~vl~ 86 (341)
T 3ktd_A 8 SRPVCILGLGLIGG-SLLRDLHAANHSVFGYNRSRSGAKSAVDEGFDVSADLEATLQRAAAEDALIVLAVPMTAIDSLLD 86 (341)
T ss_dssp SSCEEEECCSHHHH-HHHHHHHHTTCCEEEECSCHHHHHHHHHTTCCEESCHHHHHHHHHHTTCEEEECSCHHHHHHHHH
T ss_pred CCEEEEEeecHHHH-HHHHHHHHCCCEEEEEeCCHHHHHHHHHcCCeeeCCHHHHHHhcccCCCEEEEeCCHHHHHHHHH
Confidence 57899999999999 5776542 222 2345788887788877765 4799999999999999999
Q ss_pred hhccccCCCCEEEEecCCCcHHH---HHhhCCCCCceEEEecCcHHhhh-------------CC-cEEEEeCCCCCHH--
Q psy6714 195 DIKPVFNESNLLISVAGGVPIKN---MEQALPKNSRIIRAMPNTPALVR-------------QG-ASVFVRGSSASDQ-- 255 (303)
Q Consensus 195 eI~~~L~~g~IVVSiaaGV~ie~---L~~~l~~~~~VVr~mPn~p~~v~-------------~G-~til~~g~~~~~e-- 255 (303)
++.++ +++++ |+++++++... +.+.++ .. +++|+||+... .| .+++++++..+++
T Consensus 87 ~l~~~-~~~~i-v~Dv~Svk~~i~~~~~~~~~-~~---~~v~~HPmaG~e~sG~~aa~~~Lf~g~~~iltp~~~~~~e~~ 160 (341)
T 3ktd_A 87 AVHTH-APNNG-FTDVVSVKTAVYDAVKARNM-QH---RYVGSHPMAGTANSGWSASMDGLFKRAVWVVTFDQLFDGTDI 160 (341)
T ss_dssp HHHHH-CTTCC-EEECCSCSHHHHHHHHHTTC-GG---GEECEEECCSCC-CCGGGCCSSTTTTCEEEECCGGGTSSCCC
T ss_pred HHHcc-CCCCE-EEEcCCCChHHHHHHHHhCC-CC---cEecCCccccccccchhhhhhHHhcCCeEEEEeCCCCChhhh
Confidence 99875 67765 55678888754 444443 23 44444444322 12 4677777666666
Q ss_pred ------HHHHHHHHHHhcCC-cEEcCCCCchhhhhhccchHHHHHHHHHh
Q psy6714 256 ------DAQTVINLFKSVGT-CEEVPEYLLDGITGLSGSGPAYRYEVTSN 298 (303)
Q Consensus 256 ------~~e~V~~Lfs~iG~-~v~vdE~~~Da~tAlsGsgPAf~~~~ie~ 298 (303)
.++.+++||+.+|. ++++++++||.++|++|++|+|+++.+-.
T Consensus 161 ~~~~~~~~~~v~~l~~~~Ga~v~~~~~~~HD~~~A~vshlPh~ia~aL~~ 210 (341)
T 3ktd_A 161 NSTWISIWKDVVQMALAVGAEVVPSRVGPHDAAAARVSHLTHILAETLAI 210 (341)
T ss_dssp CHHHHHHHHHHHHHHHHTTCEEEECCHHHHHHHHHHHTHHHHHHHHHHHH
T ss_pred ccchHHHHHHHHHHHHHcCCEEEEeCHHHHHHHHHHHhHHHHHHHHHHHH
Confidence 88999999999995 67889999999999999999999887643
No 12
>3b1f_A Putative prephenate dehydrogenase; enzyme, 4-hydroxyphenylpyruvate, oxidative decarboxylation pathway, tyrosine biosynthesis, oxidoreduct; HET: NAD; 2.10A {Streptococcus mutans} PDB: 3dzb_A
Probab=99.76 E-value=2.2e-18 Score=158.06 Aligned_cols=165 Identities=16% Similarity=0.140 Sum_probs=120.1
Q ss_pred CCcEEEEcCChhhHHHHHHHHhh------------cHH---HHhhCCC--eEecChHHhhcCCCEEEEeeCCccHHHHHH
Q psy6714 132 RSDKQIAGTTERGPGALIASLNI------------VSK---ATGTMGA--KITFDNKEVTLNSEVIILAVKPHIVPVALN 194 (303)
Q Consensus 132 ~mkIgIIGlG~MG~~~La~al~r------------~~e---~l~e~Gv--~v~~d~~eav~~ADIVILAVpP~~v~~VL~ 194 (303)
+|||+|||+|.||. .++..+.. ..+ .+.+.|+ ....++.++++++|+||+|||++.+.+++.
T Consensus 6 ~~~I~iIG~G~mG~-~~a~~l~~~g~~~~V~~~d~~~~~~~~~~~~g~~~~~~~~~~~~~~~aDvVilavp~~~~~~v~~ 84 (290)
T 3b1f_A 6 EKTIYIAGLGLIGA-SLALGIKRDHPHYKIVGYNRSDRSRDIALERGIVDEATADFKVFAALADVIILAVPIKKTIDFIK 84 (290)
T ss_dssp CCEEEEECCSHHHH-HHHHHHHHHCTTSEEEEECSSHHHHHHHHHTTSCSEEESCTTTTGGGCSEEEECSCHHHHHHHHH
T ss_pred cceEEEEeeCHHHH-HHHHHHHhCCCCcEEEEEcCCHHHHHHHHHcCCcccccCCHHHhhcCCCEEEEcCCHHHHHHHHH
Confidence 58999999999999 45544321 122 3345676 456777788899999999999999999999
Q ss_pred hhccc-cCCCCEEEEecCCCcH---HHHHhhCCCCCceEEEecCcHH------hhh-------CCc-EEEEeCCCCCHHH
Q psy6714 195 DIKPV-FNESNLLISVAGGVPI---KNMEQALPKNSRIIRAMPNTPA------LVR-------QGA-SVFVRGSSASDQD 256 (303)
Q Consensus 195 eI~~~-L~~g~IVVSiaaGV~i---e~L~~~l~~~~~VVr~mPn~p~------~v~-------~G~-til~~g~~~~~e~ 256 (303)
++.++ ++++++|| .+++++. +.+.+.++. ..++++|++|+ .+. .|. +++++....+++.
T Consensus 85 ~l~~~~l~~~~ivi-~~~~~~~~~~~~l~~~l~~--~~~~~v~~~P~~g~~~~g~~~a~~~l~~g~~~~~~~~~~~~~~~ 161 (290)
T 3b1f_A 85 ILADLDLKEDVIIT-DAGSTKYEIVRAAEYYLKD--KPVQFVGSHPMAGSHKSGAVAANVNLFENAYYIFSPSCLTKPNT 161 (290)
T ss_dssp HHHTSCCCTTCEEE-CCCSCHHHHHHHHHHHHTT--SSCEEEEEEEC-----CCTTSCCTTTTTTSEEEEEECTTCCTTH
T ss_pred HHHhcCCCCCCEEE-ECCCCchHHHHHHHHhccc--cCCEEEEeCCcCCCCcchHHHhhHHHhCCCeEEEecCCCCCHHH
Confidence 99888 88888777 4456654 567777763 13455665554 122 343 5677766667888
Q ss_pred HHHHHHHHHhcCCc-EEcCCCCchhh-hhhccchHHHHHHHHHhhh
Q psy6714 257 AQTVINLFKSVGTC-EEVPEYLLDGI-TGLSGSGPAYRYEVTSNEV 300 (303)
Q Consensus 257 ~e~V~~Lfs~iG~~-v~vdE~~~Da~-tAlsGsgPAf~~~~ie~~~ 300 (303)
.+.++++|+.+|.. +++++++||.+ +++++++|+|.+.|++.+.
T Consensus 162 ~~~v~~l~~~~G~~~~~~~~~~~d~~~a~~s~~~~~~a~~~~~~~~ 207 (290)
T 3b1f_A 162 IPALQDLLSGLHARYVEIDAAEHDCVTSQISHFPHIIASSLMKQAG 207 (290)
T ss_dssp HHHHHHHTGGGCCEEEECCHHHHHHHHHHHTHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHcCCEEEEcCHHHHHHHHHHHhhHHHHHHHHHHHHHH
Confidence 99999999999986 46788889987 5556777777778887653
No 13
>1np3_A Ketol-acid reductoisomerase; A DEEP figure-OF-eight knot, C-terminal alpha-helical domain oxidoreductase; 2.00A {Pseudomonas aeruginosa} SCOP: a.100.1.2 c.2.1.6
Probab=99.76 E-value=2e-18 Score=163.76 Aligned_cols=166 Identities=19% Similarity=0.188 Sum_probs=127.4
Q ss_pred CCCcEEEEcCChhhHHHHHHHHhh----------c----HHHHhhCCCeEecChHHhhcCCCEEEEeeCCccHHHHHH-h
Q psy6714 131 NRSDKQIAGTTERGPGALIASLNI----------V----SKATGTMGAKITFDNKEVTLNSEVIILAVKPHIVPVALN-D 195 (303)
Q Consensus 131 ~~mkIgIIGlG~MG~~~La~al~r----------~----~e~l~e~Gv~v~~d~~eav~~ADIVILAVpP~~v~~VL~-e 195 (303)
.+|+|+|||+|+||+ .++..+.. . .+.+.+.|+.+. +..+++++||+||+|||++.+.+++. +
T Consensus 15 ~~~~I~IIG~G~mG~-alA~~L~~~G~~V~~~~~~~~~~~~~a~~~G~~~~-~~~e~~~~aDvVilavp~~~~~~v~~~~ 92 (338)
T 1np3_A 15 QGKKVAIIGYGSQGH-AHACNLKDSGVDVTVGLRSGSATVAKAEAHGLKVA-DVKTAVAAADVVMILTPDEFQGRLYKEE 92 (338)
T ss_dssp HTSCEEEECCSHHHH-HHHHHHHHTTCCEEEECCTTCHHHHHHHHTTCEEE-CHHHHHHTCSEEEECSCHHHHHHHHHHH
T ss_pred cCCEEEEECchHHHH-HHHHHHHHCcCEEEEEECChHHHHHHHHHCCCEEc-cHHHHHhcCCEEEEeCCcHHHHHHHHHH
Confidence 468999999999999 56655321 1 123446788765 88888999999999999999999998 9
Q ss_pred hccccCCCCEEEEecCCCcHHHHHhhC-CCCCceEEEecCcHHh-------hhCCcEE-EEeCCCCCHHHHHHHHHHHHh
Q psy6714 196 IKPVFNESNLLISVAGGVPIKNMEQAL-PKNSRIIRAMPNTPAL-------VRQGASV-FVRGSSASDQDAQTVINLFKS 266 (303)
Q Consensus 196 I~~~L~~g~IVVSiaaGV~ie~L~~~l-~~~~~VVr~mPn~p~~-------v~~G~ti-l~~g~~~~~e~~e~V~~Lfs~ 266 (303)
+.++++++++||+ ++|++. .+.... +.+..+++.||+.|.. ++.|.+. +++....+++..+.+..+|+.
T Consensus 93 i~~~l~~~~ivi~-~~gv~~-~~~~~~~~~~~~vv~~~P~gp~~a~~~l~~~G~g~~~ii~~~~~~~~~a~~~~~~l~~~ 170 (338)
T 1np3_A 93 IEPNLKKGATLAF-AHGFSI-HYNQVVPRADLDVIMIAPKAPGHTVRSEFVKGGGIPDLIAIYQDASGNAKNVALSYACG 170 (338)
T ss_dssp TGGGCCTTCEEEE-SCCHHH-HTTSSCCCTTCEEEEEEESSCSHHHHHHHHTTCCCCEEEEEEECSSSCHHHHHHHHHHH
T ss_pred HHhhCCCCCEEEE-cCCchh-HHHhhcCCCCcEEEeccCCCCchhHHHHHhccCCCeEEEEecCCCCHHHHHHHHHHHHH
Confidence 9988988998885 578877 555554 3345689999987753 3446654 466555677888999999999
Q ss_pred cCC----cEEcC---CCCchhh---hhhccchHHHHHHHHHhhh
Q psy6714 267 VGT----CEEVP---EYLLDGI---TGLSGSGPAYRYEVTSNEV 300 (303)
Q Consensus 267 iG~----~v~vd---E~~~Da~---tAlsGsgPAf~~~~ie~~~ 300 (303)
+|. +++++ ++++|.+ ++++|++|+|++.+++.|+
T Consensus 171 lG~~~agv~~~~~~~~~~~~~~~s~~~l~G~lp~~ia~~~e~l~ 214 (338)
T 1np3_A 171 VGGGRTGIIETTFKDETETDLFGEQAVLCGGCVELVKAGFETLV 214 (338)
T ss_dssp TTHHHHCEEECCHHHHHHHHHHHHHHTTTHHHHHHHHHHHHHHH
T ss_pred cCCCccceEeechhcccchHHHHHHHHHhhhHHHHHHHHHHHHH
Confidence 998 56665 3456677 4788999999999998776
No 14
>2g5c_A Prephenate dehydrogenase; TYRA, oxidoreductase; HET: NAD; 1.90A {Aquifex aeolicus} SCOP: a.100.1.12 c.2.1.6
Probab=99.74 E-value=9.3e-18 Score=153.29 Aligned_cols=162 Identities=16% Similarity=0.195 Sum_probs=119.4
Q ss_pred CCcEEEEcCChhhHHHHHHHHhh------------cHH---HHhhCCCe--EecChHHhhc-CCCEEEEeeCCccHHHHH
Q psy6714 132 RSDKQIAGTTERGPGALIASLNI------------VSK---ATGTMGAK--ITFDNKEVTL-NSEVIILAVKPHIVPVAL 193 (303)
Q Consensus 132 ~mkIgIIGlG~MG~~~La~al~r------------~~e---~l~e~Gv~--v~~d~~eav~-~ADIVILAVpP~~v~~VL 193 (303)
||||+|||+|.||. .++..+.. ..+ .+.+.|+. ...++.++++ ++|+||+|||++.+.+++
T Consensus 1 m~~I~iIG~G~mG~-~~a~~l~~~g~~~~V~~~d~~~~~~~~~~~~g~~~~~~~~~~~~~~~~aDvVilavp~~~~~~v~ 79 (281)
T 2g5c_A 1 MQNVLIVGVGFMGG-SFAKSLRRSGFKGKIYGYDINPESISKAVDLGIIDEGTTSIAKVEDFSPDFVMLSSPVRTFREIA 79 (281)
T ss_dssp CCEEEEESCSHHHH-HHHHHHHHTTCCSEEEEECSCHHHHHHHHHTTSCSEEESCGGGGGGTCCSEEEECSCHHHHHHHH
T ss_pred CcEEEEEecCHHHH-HHHHHHHhcCCCcEEEEEeCCHHHHHHHHHCCCcccccCCHHHHhcCCCCEEEEcCCHHHHHHHH
Confidence 57899999999999 46554321 112 23456774 4567778888 999999999999999999
Q ss_pred HhhccccCCCCEEEEecCCCcH---HHHHhhCCCCCceEEEecCcHHhh-------------hCCc-EEEEeCCCCCHHH
Q psy6714 194 NDIKPVFNESNLLISVAGGVPI---KNMEQALPKNSRIIRAMPNTPALV-------------RQGA-SVFVRGSSASDQD 256 (303)
Q Consensus 194 ~eI~~~L~~g~IVVSiaaGV~i---e~L~~~l~~~~~VVr~mPn~p~~v-------------~~G~-til~~g~~~~~e~ 256 (303)
.++.++++++++|++ +++++. +.+.+.++. . ++|++|+.. ..|. +++++....+++.
T Consensus 80 ~~l~~~l~~~~iv~~-~~~~~~~~~~~l~~~l~~--~---~v~~~p~~~~~~~gp~~a~~~l~~g~~~~~~~~~~~~~~~ 153 (281)
T 2g5c_A 80 KKLSYILSEDATVTD-QGSVKGKLVYDLENILGK--R---FVGGHPIAGTEKSGVEYSLDNLYEGKKVILTPTKKTDKKR 153 (281)
T ss_dssp HHHHHHSCTTCEEEE-CCSCCTHHHHHHHHHHGG--G---EECEEEECCCSCCSGGGCCSSTTTTCEEEECCCSSSCHHH
T ss_pred HHHHhhCCCCcEEEE-CCCCcHHHHHHHHHhccc--c---ceeeccccCCccCChhhhhhHHhCCCCEEEecCCCCCHHH
Confidence 999888888876665 445543 456666653 2 344433221 2455 6666665678899
Q ss_pred HHHHHHHHHhcCCc-EEcCCCCchhhhhhccchHHHH-HHHHHhhh
Q psy6714 257 AQTVINLFKSVGTC-EEVPEYLLDGITGLSGSGPAYR-YEVTSNEV 300 (303)
Q Consensus 257 ~e~V~~Lfs~iG~~-v~vdE~~~Da~tAlsGsgPAf~-~~~ie~~~ 300 (303)
.+.++++|+.+|.. ++++++.||.+++++|++|+|+ +.|++++.
T Consensus 154 ~~~v~~l~~~~g~~~~~~~~~~~d~~~~~~~~~~~~~a~~~~~~~~ 199 (281)
T 2g5c_A 154 LKLVKRVWEDVGGVVEYMSPELHDYVFGVVSHLPHAVAFALVDTLI 199 (281)
T ss_dssp HHHHHHHHHHTTCEEEECCHHHHHHHHHHHTHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHcCCEEEEcCHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999985 5678888999999999999995 77777764
No 15
>2f1k_A Prephenate dehydrogenase; tyrosine synthesis, X-RA crystallography structure, oxidoreductase; HET: OMT NAP; 1.55A {Synechocystis SP} SCOP: a.100.1.12 c.2.1.6
Probab=99.74 E-value=7.4e-18 Score=153.55 Aligned_cols=161 Identities=12% Similarity=0.087 Sum_probs=116.9
Q ss_pred CcEEEEcCChhhHHHHHHHHh----------hcHH---HHhhCCC--eEecChHHhhcCCCEEEEeeCCccHHHHHHhhc
Q psy6714 133 SDKQIAGTTERGPGALIASLN----------IVSK---ATGTMGA--KITFDNKEVTLNSEVIILAVKPHIVPVALNDIK 197 (303)
Q Consensus 133 mkIgIIGlG~MG~~~La~al~----------r~~e---~l~e~Gv--~v~~d~~eav~~ADIVILAVpP~~v~~VL~eI~ 197 (303)
|||+|||+|.||. .++..+. +..+ .+.+.|+ ....++.++ +++|+||+|||++.+.+++.++.
T Consensus 1 m~i~iiG~G~~G~-~~a~~l~~~g~~V~~~~~~~~~~~~~~~~g~~~~~~~~~~~~-~~~D~vi~av~~~~~~~~~~~l~ 78 (279)
T 2f1k_A 1 MKIGVVGLGLIGA-SLAGDLRRRGHYLIGVSRQQSTCEKAVERQLVDEAGQDLSLL-QTAKIIFLCTPIQLILPTLEKLI 78 (279)
T ss_dssp CEEEEECCSHHHH-HHHHHHHHTTCEEEEECSCHHHHHHHHHTTSCSEEESCGGGG-TTCSEEEECSCHHHHHHHHHHHG
T ss_pred CEEEEEcCcHHHH-HHHHHHHHCCCEEEEEECCHHHHHHHHhCCCCccccCCHHHh-CCCCEEEEECCHHHHHHHHHHHH
Confidence 7899999999999 4655432 2222 3445676 355677777 89999999999999999999999
Q ss_pred cccCCCCEEEEecCCCcHHHHHhhCCCCCceEEEecCcHHh----------hhCC-cEEEEeCCCCCHHHHHHHHHHHHh
Q psy6714 198 PVFNESNLLISVAGGVPIKNMEQALPKNSRIIRAMPNTPAL----------VRQG-ASVFVRGSSASDQDAQTVINLFKS 266 (303)
Q Consensus 198 ~~L~~g~IVVSiaaGV~ie~L~~~l~~~~~VVr~mPn~p~~----------v~~G-~til~~g~~~~~e~~e~V~~Lfs~ 266 (303)
++++++++||++ ++++...++.+......++..+|..... +..+ .++++++...+++..+.++++|+.
T Consensus 79 ~~~~~~~~vv~~-~~~~~~~~~~~~~~~~~~~~~~p~~g~~~~gp~~a~~~~~~g~~~~~~~~~~~~~~~~~~v~~l~~~ 157 (279)
T 2f1k_A 79 PHLSPTAIVTDV-ASVKTAIAEPASQLWSGFIGGHPMAGTAAQGIDGAEENLFVNAPYVLTPTEYTDPEQLACLRSVLEP 157 (279)
T ss_dssp GGSCTTCEEEEC-CSCCHHHHHHHHHHSTTCEEEEECCCCSCSSGGGCCTTTTTTCEEEEEECTTCCHHHHHHHHHHHGG
T ss_pred hhCCCCCEEEEC-CCCcHHHHHHHHHHhCCEeecCcccCCccCCHHHHhHHHhCCCcEEEecCCCCCHHHHHHHHHHHHH
Confidence 888889998886 6676654443321101344444432101 1123 567777666689999999999999
Q ss_pred cCC-cEEcCCCCchhhhhhccchHHHHHHHH
Q psy6714 267 VGT-CEEVPEYLLDGITGLSGSGPAYRYEVT 296 (303)
Q Consensus 267 iG~-~v~vdE~~~Da~tAlsGsgPAf~~~~i 296 (303)
+|. ++++++..+|.++++++++|+|++.-+
T Consensus 158 ~g~~~~~~~~~~~~~~~~~~~~~p~~i~~al 188 (279)
T 2f1k_A 158 LGVKIYLCTPADHDQAVAWISHLPVMVSAAL 188 (279)
T ss_dssp GTCEEEECCHHHHHHHHHHHTHHHHHHHHHH
T ss_pred cCCEEEEcCHHHHHHHHHHHhhHHHHHHHHH
Confidence 996 677788899999999999999988744
No 16
>2ew2_A 2-dehydropantoate 2-reductase, putative; alpha-structure, alpha-beta structure, structural genomics, protein structure initiative; HET: MSE; 2.00A {Enterococcus faecalis}
Probab=99.72 E-value=3.4e-17 Score=150.03 Aligned_cols=161 Identities=20% Similarity=0.276 Sum_probs=120.0
Q ss_pred CCCcEEEEcCChhhHHHHHHHH----------hhcHH---HHhhCCCeEec------------ChHHhhc---CCCEEEE
Q psy6714 131 NRSDKQIAGTTERGPGALIASL----------NIVSK---ATGTMGAKITF------------DNKEVTL---NSEVIIL 182 (303)
Q Consensus 131 ~~mkIgIIGlG~MG~~~La~al----------~r~~e---~l~e~Gv~v~~------------d~~eav~---~ADIVIL 182 (303)
+||||+|||+|.||. .++..+ ++..+ .+.+.|+.+.. +..++.+ ++|+||+
T Consensus 2 ~~m~i~iiG~G~~G~-~~a~~l~~~g~~V~~~~r~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~ 80 (316)
T 2ew2_A 2 NAMKIAIAGAGAMGS-RLGIMLHQGGNDVTLIDQWPAHIEAIRKNGLIADFNGEEVVANLPIFSPEEIDHQNEQVDLIIA 80 (316)
T ss_dssp --CEEEEECCSHHHH-HHHHHHHHTTCEEEEECSCHHHHHHHHHHCEEEEETTEEEEECCCEECGGGCCTTSCCCSEEEE
T ss_pred CCCeEEEECcCHHHH-HHHHHHHhCCCcEEEEECCHHHHHHHHhCCEEEEeCCCeeEecceeecchhhcccCCCCCEEEE
Confidence 468999999999999 455442 12222 33344654321 3344444 8999999
Q ss_pred eeCCccHHHHHHhhccccCCCCEEEEecCCCcH-HHHHhhCCCCCceE---------EEecCcHHhhhCCcEEEEeCCCC
Q psy6714 183 AVKPHIVPVALNDIKPVFNESNLLISVAGGVPI-KNMEQALPKNSRII---------RAMPNTPALVRQGASVFVRGSSA 252 (303)
Q Consensus 183 AVpP~~v~~VL~eI~~~L~~g~IVVSiaaGV~i-e~L~~~l~~~~~VV---------r~mPn~p~~v~~G~til~~g~~~ 252 (303)
|||++.+.++++++.++++++++||++.+|+.. +.+.+.++. .+++ +.+|+.+...+.|.+.+......
T Consensus 81 ~v~~~~~~~v~~~l~~~l~~~~~iv~~~~g~~~~~~l~~~~~~-~~vi~g~~~~~~~~~~p~~~~~~~~g~~~i~~~~~~ 159 (316)
T 2ew2_A 81 LTKAQQLDAMFKAIQPMITEKTYVLCLLNGLGHEDVLEKYVPK-ENILVGITMWTAGLEGPGRVKLLGDGEIELENIDPS 159 (316)
T ss_dssp CSCHHHHHHHHHHHGGGCCTTCEEEECCSSSCTHHHHTTTSCG-GGEEEEEECCCCEEEETTEEEECSCCCEEEEESSGG
T ss_pred EeccccHHHHHHHHHHhcCCCCEEEEecCCCCcHHHHHHHcCC-ccEEEEEeeeeeEEcCCCEEEEecCCcEEEeecCCC
Confidence 999999999999999999889999999999986 668777764 2444 44677666666776666554455
Q ss_pred CHHHHHHHHHHHHhcCCcEEcCCCC-------------chhhhhhccchHHHHH
Q psy6714 253 SDQDAQTVINLFKSVGTCEEVPEYL-------------LDGITGLSGSGPAYRY 293 (303)
Q Consensus 253 ~~e~~e~V~~Lfs~iG~~v~vdE~~-------------~Da~tAlsGsgPAf~~ 293 (303)
+++..+.+.++|+.+|..+++.++. ++.++++.+|+|+|++
T Consensus 160 ~~~~~~~~~~ll~~~g~~~~~~~d~~~~~~~Kl~~N~~~~~~~al~~~~~~~~~ 213 (316)
T 2ew2_A 160 GKKFALEVVDVFQKAGLNPSYSSNVRYSIWRKACVNGTLNGLCTILDCNIAEFG 213 (316)
T ss_dssp GHHHHHHHHHHHHHTTCCEEECTTHHHHHHHHHHHHTTHHHHHHHHTCCHHHHH
T ss_pred ccHHHHHHHHHHHhCCCCcEEchhHHHHHHHHHHHhhhHHHHHHHhCCcHHHHH
Confidence 7888999999999999988777765 7888999999999875
No 17
>2qyt_A 2-dehydropantoate 2-reductase; APC81190, porphyromonas gingi W83, structural genomics, PSI-2; HET: MSE; 2.15A {Porphyromonas gingivalis}
Probab=99.66 E-value=3.8e-16 Score=143.78 Aligned_cols=159 Identities=14% Similarity=0.172 Sum_probs=118.8
Q ss_pred CCcEEEEcCChhhHHHHHHHHh-h-----c---------H---HHHhh-CCCeEec-------------ChHHhhcCCCE
Q psy6714 132 RSDKQIAGTTERGPGALIASLN-I-----V---------S---KATGT-MGAKITF-------------DNKEVTLNSEV 179 (303)
Q Consensus 132 ~mkIgIIGlG~MG~~~La~al~-r-----~---------~---e~l~e-~Gv~v~~-------------d~~eav~~ADI 179 (303)
+|||+|||+|.||+ .++..+. . . . +.+.+ .|+.+.. +..+.++++|+
T Consensus 8 ~m~I~iiG~G~mG~-~~a~~L~~~~~~~~g~~~V~~~~r~~~~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~D~ 86 (317)
T 2qyt_A 8 PIKIAVFGLGGVGG-YYGAMLALRAAATDGLLEVSWIARGAHLEAIRAAGGLRVVTPSRDFLARPTCVTDNPAEVGTVDY 86 (317)
T ss_dssp CEEEEEECCSHHHH-HHHHHHHHHHHHTTSSEEEEEECCHHHHHHHHHHTSEEEECSSCEEEECCSEEESCHHHHCCEEE
T ss_pred CCEEEEECcCHHHH-HHHHHHHhCccccCCCCCEEEEEcHHHHHHHHhcCCeEEEeCCCCeEEecceEecCccccCCCCE
Confidence 57999999999999 4554322 1 1 1 23445 6776543 44566789999
Q ss_pred EEEeeCCccHHHHHHhhccccCCCCEEEEecCCCcH-HHHHhhCCCCCceEEEecCcHHhhh---------CCcEEEEeC
Q psy6714 180 IILAVKPHIVPVALNDIKPVFNESNLLISVAGGVPI-KNMEQALPKNSRIIRAMPNTPALVR---------QGASVFVRG 249 (303)
Q Consensus 180 VILAVpP~~v~~VL~eI~~~L~~g~IVVSiaaGV~i-e~L~~~l~~~~~VVr~mPn~p~~v~---------~G~til~~g 249 (303)
||+|||++++.++++++.+.++++++||++.+|+.. +.+.+.++. ..+++.++++++.+. .|...++..
T Consensus 87 vil~vk~~~~~~v~~~i~~~l~~~~~iv~~~nG~~~~~~l~~~l~~-~~v~~g~~~~~a~~~~pg~~~~~~~g~~~~ig~ 165 (317)
T 2qyt_A 87 ILFCTKDYDMERGVAEIRPMIGQNTKILPLLNGADIAERMRTYLPD-TVVWKGCVYISARKSAPGLITLEADRELFYFGS 165 (317)
T ss_dssp EEECCSSSCHHHHHHHHGGGEEEEEEEEECSCSSSHHHHHTTTSCT-TTBCEEEEEEEEEEEETTEEEEEEEEEEEEEEC
T ss_pred EEEecCcccHHHHHHHHHhhcCCCCEEEEccCCCCcHHHHHHHCCC-CcEEEEEEEEEEEEcCCCEEEEcCCCceEEEcC
Confidence 999999999999999999888788899999999987 678888874 467777777655432 232331222
Q ss_pred --CCCCHHHHHHHHHHHHhcCCcEEcCCC-------------CchhhhhhccchHHHHH
Q psy6714 250 --SSASDQDAQTVINLFKSVGTCEEVPEY-------------LLDGITGLSGSGPAYRY 293 (303)
Q Consensus 250 --~~~~~e~~e~V~~Lfs~iG~~v~vdE~-------------~~Da~tAlsGsgPAf~~ 293 (303)
+..+.+.. .+.++|+..|..+++.++ .++.++++.||++++++
T Consensus 166 ~~~~~~~~~~-~~~~ll~~~g~~~~~~~di~~~~~~Kl~~N~~~~~~~al~g~~~g~~~ 223 (317)
T 2qyt_A 166 GLPEQTDDEV-RLAELLTAAGIRAYNPTDIDWYIMKKFMMISVTATATAYFDKPIGSIL 223 (317)
T ss_dssp CSSSCCHHHH-HHHHHHHHTTCCEECCSCHHHHHHHHHHHHHHHHHHHHHHTSCHHHHH
T ss_pred CCCCCcCHHH-HHHHHHHHCCCCCEEchHHHHHHHHHHHHHHhhHHHHHHHCCCHHHHH
Confidence 23356777 899999999998888777 78899999999999985
No 18
>3d1l_A Putative NADP oxidoreductase BF3122; structural genomics, PSI-2, protein structure initiative, M center for structural genomics, MCSG; 2.19A {Bacteroides fragilis}
Probab=99.66 E-value=2.1e-16 Score=143.24 Aligned_cols=163 Identities=16% Similarity=0.186 Sum_probs=121.5
Q ss_pred CCcEEEEcCChhhHHHHHHHHh-----------hcHHH---Hh-hCCCeEecChHHhhcCCCEEEEeeCCccHHHHHHhh
Q psy6714 132 RSDKQIAGTTERGPGALIASLN-----------IVSKA---TG-TMGAKITFDNKEVTLNSEVIILAVKPHIVPVALNDI 196 (303)
Q Consensus 132 ~mkIgIIGlG~MG~~~La~al~-----------r~~e~---l~-e~Gv~v~~d~~eav~~ADIVILAVpP~~v~~VL~eI 196 (303)
+|||+|||+|.||.. ++..+. +..++ +. ..|+.+..+..++++++|+||+|||++.+.++++++
T Consensus 10 ~m~i~iiG~G~mG~~-~a~~l~~~g~~~v~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~Dvvi~av~~~~~~~v~~~l 88 (266)
T 3d1l_A 10 DTPIVLIGAGNLATN-LAKALYRKGFRIVQVYSRTEESARELAQKVEAEYTTDLAEVNPYAKLYIVSLKDSAFAELLQGI 88 (266)
T ss_dssp GCCEEEECCSHHHHH-HHHHHHHHTCCEEEEECSSHHHHHHHHHHTTCEEESCGGGSCSCCSEEEECCCHHHHHHHHHHH
T ss_pred CCeEEEEcCCHHHHH-HHHHHHHCCCeEEEEEeCCHHHHHHHHHHcCCceeCCHHHHhcCCCEEEEecCHHHHHHHHHHH
Confidence 589999999999994 554321 12222 32 348888788888889999999999999999999999
Q ss_pred ccccCCCCEEEEecCCCcHHHHHhhCCCCCceEEEecCcHHh-----hhCCcEEEEeCCCCCHHHHHHHHHHHHhcCC-c
Q psy6714 197 KPVFNESNLLISVAGGVPIKNMEQALPKNSRIIRAMPNTPAL-----VRQGASVFVRGSSASDQDAQTVINLFKSVGT-C 270 (303)
Q Consensus 197 ~~~L~~g~IVVSiaaGV~ie~L~~~l~~~~~VVr~mPn~p~~-----v~~G~til~~g~~~~~e~~e~V~~Lfs~iG~-~ 270 (303)
.+.++++++||++++|++.+.+.+.++. ..+ .+|..|.. ...+..++..+ .+++..+.++++|+.+|. +
T Consensus 89 ~~~~~~~~ivv~~s~~~~~~~l~~~~~~-~~~--~~~~~~~~g~~~~~~~~~~~~v~~--~~~~~~~~~~~l~~~~g~~~ 163 (266)
T 3d1l_A 89 VEGKREEALMVHTAGSIPMNVWEGHVPH-YGV--FYPMQTFSKQREVDFKEIPFFIEA--SSTEDAAFLKAIASTLSNRV 163 (266)
T ss_dssp HTTCCTTCEEEECCTTSCGGGSTTTCSS-EEE--EEECCCC---CCCCCTTCCEEEEE--SSHHHHHHHHHHHHTTCSCE
T ss_pred HhhcCCCcEEEECCCCCchHHHHHHHHh-ccC--cCCceecCCCchhhcCCCeEEEec--CCHHHHHHHHHHHHhcCCcE
Confidence 8888889999999999998877776653 112 33333211 11233333322 378889999999999995 6
Q ss_pred EEcCCCC---chhhhhhccchHHHHHHHHHhhh
Q psy6714 271 EEVPEYL---LDGITGLSGSGPAYRYEVTSNEV 300 (303)
Q Consensus 271 v~vdE~~---~Da~tAlsGsgPAf~~~~ie~~~ 300 (303)
++++++. +|.++++++++|+|++.+++++.
T Consensus 164 ~~~~~~~~~~~~~~~~l~~~~~~~~~~~~eal~ 196 (266)
T 3d1l_A 164 YDADSEQRKSLHLAAVFTCNFTNHMYALAAELL 196 (266)
T ss_dssp EECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred EEeCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 7777554 89999999999999999999875
No 19
>4huj_A Uncharacterized protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, dinucleotide-binding; 1.77A {Sinorhizobium meliloti}
Probab=99.65 E-value=1.1e-15 Score=135.95 Aligned_cols=135 Identities=18% Similarity=0.338 Sum_probs=105.8
Q ss_pred CCcEEEEcCChhhHHHHHHHH-----------hhcHHH---H-hhCCCeEecChHHhhcCCCEEEEeeCCccHHHHHHhh
Q psy6714 132 RSDKQIAGTTERGPGALIASL-----------NIVSKA---T-GTMGAKITFDNKEVTLNSEVIILAVKPHIVPVALNDI 196 (303)
Q Consensus 132 ~mkIgIIGlG~MG~~~La~al-----------~r~~e~---l-~e~Gv~v~~d~~eav~~ADIVILAVpP~~v~~VL~eI 196 (303)
||||+|||+|.||. .++..+ ++..++ + .+.|+....++.+.++++|+||+|||++.+.+++.++
T Consensus 23 mmkI~IIG~G~mG~-~la~~l~~~g~~V~~v~~r~~~~~~~l~~~~g~~~~~~~~~~~~~aDvVilavp~~~~~~v~~~l 101 (220)
T 4huj_A 23 MTTYAIIGAGAIGS-ALAERFTAAQIPAIIANSRGPASLSSVTDRFGASVKAVELKDALQADVVILAVPYDSIADIVTQV 101 (220)
T ss_dssp SCCEEEEECHHHHH-HHHHHHHHTTCCEEEECTTCGGGGHHHHHHHTTTEEECCHHHHTTSSEEEEESCGGGHHHHHTTC
T ss_pred CCEEEEECCCHHHH-HHHHHHHhCCCEEEEEECCCHHHHHHHHHHhCCCcccChHHHHhcCCEEEEeCChHHHHHHHHHh
Confidence 68999999999999 455442 222222 2 2457766667777889999999999999999999999
Q ss_pred ccccCCCCEEEEecCCC--------------cHHHHHhhCCCCCceEEEecCcHHhhhC-C-------cEEEEeCCCCCH
Q psy6714 197 KPVFNESNLLISVAGGV--------------PIKNMEQALPKNSRIIRAMPNTPALVRQ-G-------ASVFVRGSSASD 254 (303)
Q Consensus 197 ~~~L~~g~IVVSiaaGV--------------~ie~L~~~l~~~~~VVr~mPn~p~~v~~-G-------~til~~g~~~~~ 254 (303)
.+ + ++++||++++|+ ..+.+++.++ ..++++.|||++..+.. + ..+++.++ ++
T Consensus 102 ~~-~-~~~ivi~~~~g~~~~~~~~~~~~~~~~~~~l~~~l~-~~~vv~~~~~~~~~v~~~g~~~~~~~~~v~~~g~--~~ 176 (220)
T 4huj_A 102 SD-W-GGQIVVDASNAIDFPAFKPRDLGGRLSTEIVSELVP-GAKVVKAFNTLPAAVLAADPDKGTGSRVLFLSGN--HS 176 (220)
T ss_dssp SC-C-TTCEEEECCCCBCTTTCCBCCCTTCCHHHHHHHHST-TCEEEEESCSSCHHHHTSCSBCSSCEEEEEEEES--CH
T ss_pred hc-c-CCCEEEEcCCCCCcccccccccCCCcHHHHHHHHCC-CCCEEECCCCCCHHHhhhCcccCCCCeeEEEeCC--CH
Confidence 87 5 588999999998 5788999998 47899999999877654 2 23444443 68
Q ss_pred HHHHHHHHHHHhcCCcEE
Q psy6714 255 QDAQTVINLFKSVGTCEE 272 (303)
Q Consensus 255 e~~e~V~~Lfs~iG~~v~ 272 (303)
+.++.+++||+.+|..++
T Consensus 177 ~~~~~v~~l~~~~G~~~~ 194 (220)
T 4huj_A 177 DANRQVAELISSLGFAPV 194 (220)
T ss_dssp HHHHHHHHHHHHTTCEEE
T ss_pred HHHHHHHHHHHHhCCCeE
Confidence 999999999999998643
No 20
>2i76_A Hypothetical protein; NADP, dehydrogenase, TM1727, structural genomics, PSI-2, protein structure initiative; HET: NDP; 3.00A {Thermotoga maritima} SCOP: a.100.1.10 c.2.1.6
Probab=99.64 E-value=1.1e-16 Score=146.99 Aligned_cols=162 Identities=8% Similarity=0.024 Sum_probs=107.3
Q ss_pred CCCcEEEEcCChhhHHHHHHHH----------hhcHHH---Hh-hCCCeEecChHHhhcCCCEEEEeeCCccHHHHHHhh
Q psy6714 131 NRSDKQIAGTTERGPGALIASL----------NIVSKA---TG-TMGAKITFDNKEVTLNSEVIILAVKPHIVPVALNDI 196 (303)
Q Consensus 131 ~~mkIgIIGlG~MG~~~La~al----------~r~~e~---l~-e~Gv~v~~d~~eav~~ADIVILAVpP~~v~~VL~eI 196 (303)
|||||+|||+|.||.+ ++..+ ++..++ +. ..|+ .+.++.++++++|+||+|||++.+.+++.++
T Consensus 1 M~m~I~iIG~G~mG~~-la~~l~~~~~v~~v~~~~~~~~~~~~~~~g~-~~~~~~~~~~~~DvVilav~~~~~~~v~~~l 78 (276)
T 2i76_A 1 MSLVLNFVGTGTLTRF-FLECLKDRYEIGYILSRSIDRARNLAEVYGG-KAATLEKHPELNGVVFVIVPDRYIKTVANHL 78 (276)
T ss_dssp ---CCEEESCCHHHHH-HHHTTC----CCCEECSSHHHHHHHHHHTCC-CCCSSCCCCC---CEEECSCTTTHHHHHTTT
T ss_pred CCceEEEEeCCHHHHH-HHHHHHHcCcEEEEEeCCHHHHHHHHHHcCC-ccCCHHHHHhcCCEEEEeCChHHHHHHHHHh
Confidence 3689999999999994 55432 111222 22 4576 5667777888999999999999999999887
Q ss_pred ccccCCCCEEEEecCCCcHHHHHhhCCCCCceEEEecCcHHhhh--CCcEEEEeCCCCCHHHHHHHHHHHHhcCC-cEEc
Q psy6714 197 KPVFNESNLLISVAGGVPIKNMEQALPKNSRIIRAMPNTPALVR--QGASVFVRGSSASDQDAQTVINLFKSVGT-CEEV 273 (303)
Q Consensus 197 ~~~L~~g~IVVSiaaGV~ie~L~~~l~~~~~VVr~mPn~p~~v~--~G~til~~g~~~~~e~~e~V~~Lfs~iG~-~v~v 273 (303)
. .++++||+++++++.+.++..+......+..++|.+..+. .+.+.+..+ +++.++.++.||+.+|. ++++
T Consensus 79 ~---~~~~ivi~~s~~~~~~~l~~~~~~~~~p~~~~~g~~~~~~~~~~~~~~~~~---~~~~~~~~~~l~~~lG~~~~~v 152 (276)
T 2i76_A 79 N---LGDAVLVHCSGFLSSEIFKKSGRASIHPNFSFSSLEKALEMKDQIVFGLEG---DERGLPIVKKIAEEISGKYFVI 152 (276)
T ss_dssp C---CSSCCEEECCSSSCGGGGCSSSEEEEEECSCC--CTTGGGCGGGCCEEECC---CTTTHHHHHHHHHHHCSCEEEC
T ss_pred c---cCCCEEEECCCCCcHHHHHHhhccccchhhhcCCCchhHHHhCCCeEEEEe---ChHHHHHHHHHHHHhCCCEEEE
Confidence 6 4788999998888887765542100011223556554443 444444443 34568999999999995 7888
Q ss_pred CCCC---chhhhhhccchHHHHHHHHHhhh
Q psy6714 274 PEYL---LDGITGLSGSGPAYRYEVTSNEV 300 (303)
Q Consensus 274 dE~~---~Da~tAlsGsgPAf~~~~ie~~~ 300 (303)
++++ ++..+++++++|++++.++..+.
T Consensus 153 ~~~~~~~~~~~~~l~~n~~~~~~~~a~~~~ 182 (276)
T 2i76_A 153 PSEKKKAYHLAAVIASNFPVALAYLSKRIY 182 (276)
T ss_dssp CGGGHHHHHHHHHHHHTTHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 8654 56788899999999888776554
No 21
>3dtt_A NADP oxidoreductase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: NAP; 1.70A {Arthrobacter SP}
Probab=99.61 E-value=4.3e-15 Score=134.25 Aligned_cols=159 Identities=17% Similarity=0.213 Sum_probs=115.5
Q ss_pred cCCCcEEEEcCChhhHHHHHHHH----------hhcHHH--------------H----hhCCCeEecChHHhhcCCCEEE
Q psy6714 130 WNRSDKQIAGTTERGPGALIASL----------NIVSKA--------------T----GTMGAKITFDNKEVTLNSEVII 181 (303)
Q Consensus 130 ~~~mkIgIIGlG~MG~~~La~al----------~r~~e~--------------l----~e~Gv~v~~d~~eav~~ADIVI 181 (303)
+..|||||||+|.||.+ |+..+ ++..++ + .+.|.....++.+++++||+||
T Consensus 17 ~~~~kIgiIG~G~mG~a-lA~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~aDvVi 95 (245)
T 3dtt_A 17 FQGMKIAVLGTGTVGRT-MAGALADLGHEVTIGTRDPKATLARAEPDAMGAPPFSQWLPEHPHVHLAAFADVAAGAELVV 95 (245)
T ss_dssp --CCEEEEECCSHHHHH-HHHHHHHTTCEEEEEESCHHHHHTCC-------CCHHHHGGGSTTCEEEEHHHHHHHCSEEE
T ss_pred cCCCeEEEECCCHHHHH-HHHHHHHCCCEEEEEeCChhhhhhhhhhhhhcchhhhHHHhhcCceeccCHHHHHhcCCEEE
Confidence 35789999999999994 55442 222333 1 1345556678889999999999
Q ss_pred EeeCCccHHHHHHhh-ccccCCCCEEEEecCCC----------------c-HHHHHhhCCCCCceEEEecCcHHhhhCC-
Q psy6714 182 LAVKPHIVPVALNDI-KPVFNESNLLISVAGGV----------------P-IKNMEQALPKNSRIIRAMPNTPALVRQG- 242 (303)
Q Consensus 182 LAVpP~~v~~VL~eI-~~~L~~g~IVVSiaaGV----------------~-ie~L~~~l~~~~~VVr~mPn~p~~v~~G- 242 (303)
+|||++.+.+++.++ .+.+ ++++||++++|+ . .+.+++.++. .++++.|+++++.+..+
T Consensus 96 lavp~~~~~~~~~~i~~~~l-~g~ivi~~s~~~~~~~G~~~t~~~~~~~~~~~~l~~~l~~-~~vv~~~~~~~a~v~~~~ 173 (245)
T 3dtt_A 96 NATEGASSIAALTAAGAENL-AGKILVDIANPLDFSHGMPPTLNPVNTDSLGEQIQRTFPE-AKVVKTLNTMNASLMVDP 173 (245)
T ss_dssp ECSCGGGHHHHHHHHCHHHH-TTSEEEECCCCEECTTCSSCEESSCSSCCHHHHHHHHSTT-SEEEECSTTSCHHHHHCG
T ss_pred EccCcHHHHHHHHHhhhhhc-CCCEEEECCCCCCCcCCccccccCCCCccHHHHHHHHCCC-CeEEEeecccCHHHhcCc
Confidence 999999999999988 7777 889999998654 2 3678888884 79999999987755432
Q ss_pred -------cEEEEeCCCCCHHHHHHHHHHHHhcCCc--EEcCCCCchhhhhhccchHHHHHHH
Q psy6714 243 -------ASVFVRGSSASDQDAQTVINLFKSVGTC--EEVPEYLLDGITGLSGSGPAYRYEV 295 (303)
Q Consensus 243 -------~til~~g~~~~~e~~e~V~~Lfs~iG~~--v~vdE~~~Da~tAlsGsgPAf~~~~ 295 (303)
.++++.++ +++.++.++++|+.+|.. +.+- .+.....+=.+.+-|+...
T Consensus 174 ~~a~~g~~~~~v~g~--d~~~~~~v~~ll~~~g~~~~~~~G--~~g~a~~~k~~~~~~~~l~ 231 (245)
T 3dtt_A 174 GRAAGGDHSVFVSGN--DAAAKAEVATLLKSLGHQDVIDLG--DITTARGAEMLLPVWIRLW 231 (245)
T ss_dssp GGTGGGCCCEEEECS--CHHHHHHHHHHHHHTTCCCEEEEE--SGGGHHHHHTTHHHHHHHH
T ss_pred cccCCCCeeEEEECC--CHHHHHHHHHHHHHcCCCceeccC--cHHHHHHhhhhHHHHHHHH
Confidence 23455443 689999999999999963 4443 3455566666666665554
No 22
>1jay_A Coenzyme F420H2:NADP+ oxidoreductase (FNO); rossman fold, structural genomics; HET: NAP F42; 1.65A {Archaeoglobus fulgidus} SCOP: c.2.1.6 PDB: 1jax_A*
Probab=99.61 E-value=3.4e-15 Score=130.46 Aligned_cols=156 Identities=16% Similarity=0.214 Sum_probs=121.5
Q ss_pred CcEEEEc-CChhhHHHHHHHHh----------hcHHH---Hhh-CC-------CeEecChHHhhcCCCEEEEeeCCccHH
Q psy6714 133 SDKQIAG-TTERGPGALIASLN----------IVSKA---TGT-MG-------AKITFDNKEVTLNSEVIILAVKPHIVP 190 (303)
Q Consensus 133 mkIgIIG-lG~MG~~~La~al~----------r~~e~---l~e-~G-------v~v~~d~~eav~~ADIVILAVpP~~v~ 190 (303)
|||+||| +|.||.. ++..+. +..++ +.+ .| +. ..+..++++++|+||+|+|++.+.
T Consensus 1 m~i~iiGa~G~~G~~-ia~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~D~Vi~~~~~~~~~ 78 (212)
T 1jay_A 1 MRVALLGGTGNLGKG-LALRLATLGHEIVVGSRREEKAEAKAAEYRRIAGDASIT-GMKNEDAAEACDIAVLTIPWEHAI 78 (212)
T ss_dssp CEEEEETTTSHHHHH-HHHHHHTTTCEEEEEESSHHHHHHHHHHHHHHHSSCCEE-EEEHHHHHHHCSEEEECSCHHHHH
T ss_pred CeEEEEcCCCHHHHH-HHHHHHHCCCEEEEEeCCHHHHHHHHHHhccccccCCCC-hhhHHHHHhcCCEEEEeCChhhHH
Confidence 7899999 9999994 554421 22222 222 23 33 356677888999999999999999
Q ss_pred HHHHhhccccCCCCEEEEecCCCc--------------HHHHHhhCCCCCceEEEecCcHHhhhCC------cEEEEeCC
Q psy6714 191 VALNDIKPVFNESNLLISVAGGVP--------------IKNMEQALPKNSRIIRAMPNTPALVRQG------ASVFVRGS 250 (303)
Q Consensus 191 ~VL~eI~~~L~~g~IVVSiaaGV~--------------ie~L~~~l~~~~~VVr~mPn~p~~v~~G------~til~~g~ 250 (303)
+++.++.+.+ ++++||++++|++ .+.+.+.++. ..++++||+.+.....+ .++++.++
T Consensus 79 ~~~~~l~~~~-~~~~vi~~~~g~~~~~~~~~~~~g~~~~~~l~~~~~~-~~~v~~~~~~~~~~~~~~~~~~~~~~~~~g~ 156 (212)
T 1jay_A 79 DTARDLKNIL-REKIVVSPLVPVSRGAKGFTYSSERSAAEIVAEVLES-EKVVSALHTIPAARFANLDEKFDWDVPVCGD 156 (212)
T ss_dssp HHHHHTHHHH-TTSEEEECCCCEECCTTCCEECCSSCHHHHHHHHHTC-SCEEECCTTCCHHHHHCTTCCCCEEEEEEES
T ss_pred HHHHHHHHHc-CCCEEEEcCCCcCcCCceeecCCCCcHHHHHHHhCCC-CeEEEEccchHHHHhhCcCCCCCccEEEECC
Confidence 9999888777 4889999999988 6788888874 68999998887665443 56677764
Q ss_pred CCCHHHHHHHHHHHHhc-CCc-EEcCCCCchhhhhhccchHHHHHHHH
Q psy6714 251 SASDQDAQTVINLFKSV-GTC-EEVPEYLLDGITGLSGSGPAYRYEVT 296 (303)
Q Consensus 251 ~~~~e~~e~V~~Lfs~i-G~~-v~vdE~~~Da~tAlsGsgPAf~~~~i 296 (303)
+++..+.+.++|+.+ |.. +++.+ ++...++-+++|+|++..+
T Consensus 157 --~~~~~~~v~~l~~~~~G~~~~~~~~--~~~a~~~k~~~~~~~~~~~ 200 (212)
T 1jay_A 157 --DDESKKVVMSLISEIDGLRPLDAGP--LSNSRLVESLTPLILNIMR 200 (212)
T ss_dssp --CHHHHHHHHHHHHHSTTEEEEEEES--GGGHHHHHTHHHHHHHHHH
T ss_pred --cHHHHHHHHHHHHHcCCCCceeccc--hhHHHHhcchHHHHHHHHH
Confidence 588999999999999 975 45654 6888999999999999887
No 23
>3dfu_A Uncharacterized protein from 6-phosphogluconate dehydrogenase-like family; putative rossmann-like dehydrogenase, structural genomics; HET: MSE; 2.07A {Corynebacterium glutamicum}
Probab=99.60 E-value=4.2e-15 Score=135.31 Aligned_cols=150 Identities=12% Similarity=0.064 Sum_probs=113.8
Q ss_pred CCCcEEEEcCChhhHHHHHHHHhhcHHHHhhCCCeEe--cChHHhhcCCCEEEEeeCCccHHHHHHhhccccCCCCEEEE
Q psy6714 131 NRSDKQIAGTTERGPGALIASLNIVSKATGTMGAKIT--FDNKEVTLNSEVIILAVKPHIVPVALNDIKPVFNESNLLIS 208 (303)
Q Consensus 131 ~~mkIgIIGlG~MG~~~La~al~r~~e~l~e~Gv~v~--~d~~eav~~ADIVILAVpP~~v~~VL~eI~~~L~~g~IVVS 208 (303)
.+|||+|||+|+||+ +|++.+. +.|..+. ..+ +.+++|| |||||++.+.+++.++.++++++++||+
T Consensus 5 ~~mkI~IIG~G~~G~-sLA~~L~-------~~G~~V~~~~~~-~~~~~aD--ilavP~~ai~~vl~~l~~~l~~g~ivvd 73 (232)
T 3dfu_A 5 PRLRVGIFDDGSSTV-NMAEKLD-------SVGHYVTVLHAP-EDIRDFE--LVVIDAHGVEGYVEKLSAFARRGQMFLH 73 (232)
T ss_dssp CCCEEEEECCSCCCS-CHHHHHH-------HTTCEEEECSSG-GGGGGCS--EEEECSSCHHHHHHHHHTTCCTTCEEEE
T ss_pred CCcEEEEEeeCHHHH-HHHHHHH-------HCCCEEEEecCH-HHhccCC--EEEEcHHHHHHHHHHHHHhcCCCCEEEE
Confidence 368999999999999 5765543 3355432 333 3478899 9999999999999999988889999999
Q ss_pred ecCCCcHHHHHhhCCCCCceEEEecCcHHhhhCCcEEEEeCCCCCHHHHHHHHHHHHhcCC-cEEcCCCCchhhhhhccc
Q psy6714 209 VAGGVPIKNMEQALPKNSRIIRAMPNTPALVRQGASVFVRGSSASDQDAQTVINLFKSVGT-CEEVPEYLLDGITGLSGS 287 (303)
Q Consensus 209 iaaGV~ie~L~~~l~~~~~VVr~mPn~p~~v~~G~til~~g~~~~~e~~e~V~~Lfs~iG~-~v~vdE~~~Da~tAlsGs 287 (303)
+++.++.+.++.....+..++..||... ...+++.+ +++..+.++.|++.+|. +++++++++|.+.|.++.
T Consensus 74 ~sgs~~~~vl~~~~~~g~~fvg~HPm~g-----~~~~i~a~---d~~a~~~l~~L~~~lG~~vv~~~~~~hd~~~AAvsh 145 (232)
T 3dfu_A 74 TSLTHGITVMDPLETSGGIVMSAHPIGQ-----DRWVASAL---DELGETIVGLLVGELGGSIVEIADDKRAQLAAALTY 145 (232)
T ss_dssp CCSSCCGGGGHHHHHTTCEEEEEEEEET-----TEEEEEES---SHHHHHHHHHHHHHTTCEECCCCGGGHHHHHHHHHH
T ss_pred ECCcCHHHHHHHHHhCCCcEEEeeeCCC-----CceeeeCC---CHHHHHHHHHHHHHhCCEEEEeCHHHHhHHHHHHHH
Confidence 8888887766665443456777777632 23455554 67889999999999996 577899999999888877
Q ss_pred hHHHHHHHHHhh
Q psy6714 288 GPAYRYEVTSNE 299 (303)
Q Consensus 288 gPAf~~~~ie~~ 299 (303)
.|-.+.++.+++
T Consensus 146 ~nhLv~L~~~A~ 157 (232)
T 3dfu_A 146 AGFLSTLQRDAS 157 (232)
T ss_dssp HHHHHHHHHHHH
T ss_pred HHHHHHHHHHHH
Confidence 777766665553
No 24
>3hn2_A 2-dehydropantoate 2-reductase; PSI-2, NYSGXRC, structural GE protein structure initiative; 2.50A {Geobacter metallireducens}
Probab=99.59 E-value=8.3e-15 Score=136.63 Aligned_cols=158 Identities=15% Similarity=0.194 Sum_probs=113.0
Q ss_pred CCCcEEEEcCChhhHHHHHHHHhh-----------cHHHHhhCCCeEe-------------cChHHhhcCCCEEEEeeCC
Q psy6714 131 NRSDKQIAGTTERGPGALIASLNI-----------VSKATGTMGAKIT-------------FDNKEVTLNSEVIILAVKP 186 (303)
Q Consensus 131 ~~mkIgIIGlG~MG~~~La~al~r-----------~~e~l~e~Gv~v~-------------~d~~eav~~ADIVILAVpP 186 (303)
|+|||+|||+|.||+ .++..+.+ ..+.+.+.|+.+. .+..+.+..+|+||+|||+
T Consensus 1 M~mkI~IiGaGaiG~-~~a~~L~~~g~~V~~~~r~~~~~i~~~g~~~~~~~g~~~~~~~~~~~~~~~~~~~D~vilavk~ 79 (312)
T 3hn2_A 1 MSLRIAIVGAGALGL-YYGALLQRSGEDVHFLLRRDYEAIAGNGLKVFSINGDFTLPHVKGYRAPEEIGPMDLVLVGLKT 79 (312)
T ss_dssp ---CEEEECCSTTHH-HHHHHHHHTSCCEEEECSTTHHHHHHTCEEEEETTCCEEESCCCEESCHHHHCCCSEEEECCCG
T ss_pred CCCEEEEECcCHHHH-HHHHHHHHCCCeEEEEEcCcHHHHHhCCCEEEcCCCeEEEeeceeecCHHHcCCCCEEEEecCC
Confidence 358999999999999 56654321 1234555555321 1233457899999999999
Q ss_pred ccHHHHHHhhccccCCCCEEEEecCCCc-HHHHHhhCCCCCceEEEe---------cCcHHhhhCCcEEEEeCCCCCHHH
Q psy6714 187 HIVPVALNDIKPVFNESNLLISVAGGVP-IKNMEQALPKNSRIIRAM---------PNTPALVRQGASVFVRGSSASDQD 256 (303)
Q Consensus 187 ~~v~~VL~eI~~~L~~g~IVVSiaaGV~-ie~L~~~l~~~~~VVr~m---------Pn~p~~v~~G~til~~g~~~~~e~ 256 (303)
+++.++++++++++.++++||++++|+. .+.|.+.++. .++++.+ |++....+.|.+.+...+..+.+.
T Consensus 80 ~~~~~~l~~l~~~l~~~~~iv~l~nGi~~~~~l~~~~~~-~~v~~~~~~~~a~~~~p~~v~~~~~g~~~ig~~~~~~~~~ 158 (312)
T 3hn2_A 80 FANSRYEELIRPLVEEGTQILTLQNGLGNEEALATLFGA-ERIIGGVAFLCSNRGEPGEVHHLGAGRIILGEFLPRDTGR 158 (312)
T ss_dssp GGGGGHHHHHGGGCCTTCEEEECCSSSSHHHHHHHHTCG-GGEEEEEEEEECCBCSSSEEEECEEEEEEEEESSCCCSHH
T ss_pred CCcHHHHHHHHhhcCCCCEEEEecCCCCcHHHHHHHCCC-CcEEEEEEEeeeEEcCCcEEEECCCCeEEEecCCCCccHH
Confidence 9999999999999989999999999997 5678888874 4677665 444333333333333323334567
Q ss_pred HHHHHHHHHhcCCcEEcCCCC-------------chhhhhhccchHH
Q psy6714 257 AQTVINLFKSVGTCEEVPEYL-------------LDGITGLSGSGPA 290 (303)
Q Consensus 257 ~e~V~~Lfs~iG~~v~vdE~~-------------~Da~tAlsGsgPA 290 (303)
.+.+.++|+..|..++++++. ++.++++.+|..+
T Consensus 159 ~~~l~~~l~~~g~~~~~~~di~~~~w~Kl~~N~~~n~l~al~~~~~G 205 (312)
T 3hn2_A 159 IEELAAMFRQAGVDCRTTDDLKRARWEKLVWNIPFNGLCALLQQPVN 205 (312)
T ss_dssp HHHHHHHHHHTTCCEEECSCHHHHHHHHHHHHHHHHHHHHHHTCCHH
T ss_pred HHHHHHHHHhCCCCcEEChHHHHHHHHHHHHHHhHHHHHHHHCCCHH
Confidence 789999999999998888887 7888999887654
No 25
>1f0y_A HCDH, L-3-hydroxyacyl-COA dehydrogenase; abortive ternary complex, oxidoreductase; HET: CAA NAD; 1.80A {Homo sapiens} SCOP: a.100.1.3 c.2.1.6 PDB: 3rqs_A 1lsj_A* 1il0_A* 1lso_A* 1m76_A* 1m75_A* 1f14_A 1f12_A 1f17_A* 3had_A* 2hdh_A* 3hdh_A*
Probab=99.57 E-value=2.5e-14 Score=132.54 Aligned_cols=110 Identities=12% Similarity=0.198 Sum_probs=88.1
Q ss_pred CeEecChHHhhcCCCEEEEeeCCcc--HHHHHHhhccccCCCCEEEEecCCCcHHHHHhhCCCCCceEEEecCcHHhhhC
Q psy6714 164 AKITFDNKEVTLNSEVIILAVKPHI--VPVALNDIKPVFNESNLLISVAGGVPIKNMEQALPKNSRIIRAMPNTPALVRQ 241 (303)
Q Consensus 164 v~v~~d~~eav~~ADIVILAVpP~~--v~~VL~eI~~~L~~g~IVVSiaaGV~ie~L~~~l~~~~~VVr~mPn~p~~v~~ 241 (303)
+..+.+..+++++||+||+|||.+. ..+++.++.++++++++|+|.++++++..+.+.+.....+++.||+.|.....
T Consensus 88 i~~~~~~~~~~~~aD~Vi~avp~~~~~~~~v~~~l~~~~~~~~iv~s~ts~i~~~~l~~~~~~~~~~~g~h~~~P~~~~~ 167 (302)
T 1f0y_A 88 IATSTDAASVVHSTDLVVEAIVENLKVKNELFKRLDKFAAEHTIFASNTSSLQITSIANATTRQDRFAGLHFFNPVPVMK 167 (302)
T ss_dssp EEEESCHHHHTTSCSEEEECCCSCHHHHHHHHHHHTTTSCTTCEEEECCSSSCHHHHHTTSSCGGGEEEEEECSSTTTCC
T ss_pred eEEecCHHHhhcCCCEEEEcCcCcHHHHHHHHHHHHhhCCCCeEEEECCCCCCHHHHHHhcCCcccEEEEecCCCcccCc
Confidence 4556777778999999999998754 46788889888888999999999999999988775334689999988865544
Q ss_pred CcEEEEeCCCCCHHHHHHHHHHHHhcCCc-EEcC
Q psy6714 242 GASVFVRGSSASDQDAQTVINLFKSVGTC-EEVP 274 (303)
Q Consensus 242 G~til~~g~~~~~e~~e~V~~Lfs~iG~~-v~vd 274 (303)
.+ .++.+...+++..+.+.++|+.+|.. +.+.
T Consensus 168 ~~-~i~~g~~~~~e~~~~~~~l~~~~G~~~v~~~ 200 (302)
T 1f0y_A 168 LV-EVIKTPMTSQKTFESLVDFSKALGKHPVSCK 200 (302)
T ss_dssp EE-EEECCTTCCHHHHHHHHHHHHHTTCEEEEEC
T ss_pred eE-EEeCCCCCCHHHHHHHHHHHHHcCCceEEec
Confidence 43 45677778999999999999999975 4443
No 26
>3k96_A Glycerol-3-phosphate dehydrogenase [NAD(P)+]; GPSA, IDP01976, oxidoreductase, phospholipid biosynthesis; HET: EPE; 2.10A {Coxiella burnetii}
Probab=99.55 E-value=5e-14 Score=134.93 Aligned_cols=144 Identities=15% Similarity=0.123 Sum_probs=110.3
Q ss_pred CCcEEEEcCChhhHHHHHHHHh----------hcHH---HHhhCC--------------CeEecChHHhhcCCCEEEEee
Q psy6714 132 RSDKQIAGTTERGPGALIASLN----------IVSK---ATGTMG--------------AKITFDNKEVTLNSEVIILAV 184 (303)
Q Consensus 132 ~mkIgIIGlG~MG~~~La~al~----------r~~e---~l~e~G--------------v~v~~d~~eav~~ADIVILAV 184 (303)
+|||+|||+|.||+ .++..+. +..+ .+.+.| +..+.|+.++++++|+||+||
T Consensus 29 ~mkI~VIGaG~mG~-alA~~La~~G~~V~l~~r~~~~~~~i~~~~~~~~~l~g~~l~~~i~~t~d~~ea~~~aDvVilaV 107 (356)
T 3k96_A 29 KHPIAILGAGSWGT-ALALVLARKGQKVRLWSYESDHVDEMQAEGVNNRYLPNYPFPETLKAYCDLKASLEGVTDILIVV 107 (356)
T ss_dssp CSCEEEECCSHHHH-HHHHHHHTTTCCEEEECSCHHHHHHHHHHSSBTTTBTTCCCCTTEEEESCHHHHHTTCCEEEECC
T ss_pred CCeEEEECccHHHH-HHHHHHHHCCCeEEEEeCCHHHHHHHHHcCCCcccCCCCccCCCeEEECCHHHHHhcCCEEEECC
Confidence 58999999999999 4655431 2222 222222 355678888999999999999
Q ss_pred CCccHHHHHHhhccccCCCCEEEEecCCCcHH------HHHhhCCCCCceEEEecCcHHhhhCCc-EEEEeCCCCCHHHH
Q psy6714 185 KPHIVPVALNDIKPVFNESNLLISVAGGVPIK------NMEQALPKNSRIIRAMPNTPALVRQGA-SVFVRGSSASDQDA 257 (303)
Q Consensus 185 pP~~v~~VL~eI~~~L~~g~IVVSiaaGV~ie------~L~~~l~~~~~VVr~mPn~p~~v~~G~-til~~g~~~~~e~~ 257 (303)
|++.++++++++.++++++++|||+++|+..+ .+++.++.....+...|+++.++..+. +.++.+ ..+++..
T Consensus 108 p~~~~~~vl~~i~~~l~~~~ivvs~~kGi~~~t~~~se~i~~~l~~~~~~vlsgP~~a~ev~~g~pt~~via-~~~~~~~ 186 (356)
T 3k96_A 108 PSFAFHEVITRMKPLIDAKTRIAWGTKGLAKGSRLLHEVVATELGQVPMAVISGPSLATEVAANLPTAVSLA-SNNSQFS 186 (356)
T ss_dssp CHHHHHHHHHHHGGGCCTTCEEEECCCSCBTTTBCHHHHHHHHHCSCCEEEEESSCCHHHHHTTCCEEEEEE-ESCHHHH
T ss_pred CHHHHHHHHHHHHHhcCCCCEEEEEeCCCCcCccCHHHHHHHHcCCCCEEEEECccHHHHHHcCCCeEEEEe-cCCHHHH
Confidence 99999999999999998999999999999874 577777743345788899998887775 333332 2378888
Q ss_pred HHHHHHHHhcCCcEEcCCCC
Q psy6714 258 QTVINLFKSVGTCEEVPEYL 277 (303)
Q Consensus 258 e~V~~Lfs~iG~~v~vdE~~ 277 (303)
+.++++|+..|..++++++.
T Consensus 187 ~~v~~lf~~~~~rv~~~~Di 206 (356)
T 3k96_A 187 KDLIERLHGQRFRVYKNDDM 206 (356)
T ss_dssp HHHHHHHCCSSEEEEEESCH
T ss_pred HHHHHHhCCCCeeEEEeCCH
Confidence 99999999999888776654
No 27
>2dpo_A L-gulonate 3-dehydrogenase; structural genomics, NPPSFA, national project on protein structural and functional analyses; 1.70A {Oryctolagus cuniculus} PDB: 2ep9_A* 3ado_A 3a97_A 3adp_A* 3f3s_A*
Probab=99.52 E-value=1.6e-13 Score=129.81 Aligned_cols=141 Identities=15% Similarity=0.141 Sum_probs=108.0
Q ss_pred CCcEEEEcCChhhHHHHHHHH----------hhcHHH--------------HhhCC--------------CeEecChHHh
Q psy6714 132 RSDKQIAGTTERGPGALIASL----------NIVSKA--------------TGTMG--------------AKITFDNKEV 173 (303)
Q Consensus 132 ~mkIgIIGlG~MG~~~La~al----------~r~~e~--------------l~e~G--------------v~v~~d~~ea 173 (303)
++||+|||+|.||.+ ++..+ ++..+. +.+.| +..+.++.++
T Consensus 6 ~~kI~vIGaG~MG~~-iA~~la~~G~~V~l~d~~~~~~~~~~~~i~~~l~~l~~~G~~~g~~~~~~~~~~i~~~~~~~ea 84 (319)
T 2dpo_A 6 AGDVLIVGSGLVGRS-WAMLFASGGFRVKLYDIEPRQITGALENIRKEMKSLQQSGSLKGSLSAEEQLSLISSCTNLAEA 84 (319)
T ss_dssp -CEEEEECCSHHHHH-HHHHHHHTTCCEEEECSCHHHHHHHHHHHHHHHHHHHHTTCCCSSSCHHHHHHTEEEECCHHHH
T ss_pred CceEEEEeeCHHHHH-HHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHHHHHHHHcCccccccchHHHhhceEEeCCHHHH
Confidence 578999999999995 44331 111111 12234 4567888889
Q ss_pred hcCCCEEEEeeCCc--cHHHHHHhhccccCCCCEEEEecCCCcHHHHHhhCCCCCceEEEecCcHHhhhCCcEEEEeCCC
Q psy6714 174 TLNSEVIILAVKPH--IVPVALNDIKPVFNESNLLISVAGGVPIKNMEQALPKNSRIIRAMPNTPALVRQGASVFVRGSS 251 (303)
Q Consensus 174 v~~ADIVILAVpP~--~v~~VL~eI~~~L~~g~IVVSiaaGV~ie~L~~~l~~~~~VVr~mPn~p~~v~~G~til~~g~~ 251 (303)
+++||+||+|||.. ...+++.++.++++++++|+|.++++++..+.+.++...+++..||+.|..+. ....++++..
T Consensus 85 v~~aDlVieavpe~~~~k~~v~~~l~~~~~~~~Ii~s~tS~i~~~~la~~~~~~~r~ig~Hp~~P~~~~-~lveiv~g~~ 163 (319)
T 2dpo_A 85 VEGVVHIQECVPENLDLKRKIFAQLDSIVDDRVVLSSSSSCLLPSKLFTGLAHVKQCIVAHPVNPPYYI-PLVELVPHPE 163 (319)
T ss_dssp TTTEEEEEECCCSCHHHHHHHHHHHHTTCCSSSEEEECCSSCCHHHHHTTCTTGGGEEEEEECSSTTTC-CEEEEEECTT
T ss_pred HhcCCEEEEeccCCHHHHHHHHHHHHhhCCCCeEEEEeCCChHHHHHHHhcCCCCCeEEeecCCchhhc-ceEEEeCCCC
Confidence 99999999999864 35678888988888999999999999999999888644579999999887543 3455677788
Q ss_pred CCHHHHHHHHHHHHhcCCc-EEcC
Q psy6714 252 ASDQDAQTVINLFKSVGTC-EEVP 274 (303)
Q Consensus 252 ~~~e~~e~V~~Lfs~iG~~-v~vd 274 (303)
.+++.++.++++|+.+|+. +.+.
T Consensus 164 t~~e~~~~~~~l~~~lGk~~v~v~ 187 (319)
T 2dpo_A 164 TSPATVDRTHALMRKIGQSPVRVL 187 (319)
T ss_dssp CCHHHHHHHHHHHHHTTCEEEECS
T ss_pred CCHHHHHHHHHHHHHcCCEEEEEC
Confidence 8999999999999999985 5564
No 28
>2yjz_A Metalloreductase steap4; oxidoreductase, metabolic syndrome; HET: NAP; 2.20A {Rattus norvegicus}
Probab=99.24 E-value=1.9e-15 Score=133.67 Aligned_cols=134 Identities=22% Similarity=0.303 Sum_probs=99.3
Q ss_pred cCCCcEEEEcCChhhHHHHHHHH----------hhcHH--HHhhCCCeEecChHHhhcCCCEEEEeeCCccHHHHHHhhc
Q psy6714 130 WNRSDKQIAGTTERGPGALIASL----------NIVSK--ATGTMGAKITFDNKEVTLNSEVIILAVKPHIVPVALNDIK 197 (303)
Q Consensus 130 ~~~mkIgIIGlG~MG~~~La~al----------~r~~e--~l~e~Gv~v~~d~~eav~~ADIVILAVpP~~v~~VL~eI~ 197 (303)
...|||+|||+|.||.. ++..+ ++..+ .+.+.|+... ++.++++++|+||+|||++++++++ ++.
T Consensus 17 ~~~~~I~iIG~G~mG~~-la~~L~~~G~~V~~~~r~~~~~~~~~~g~~~~-~~~~~~~~aDvVilav~~~~~~~v~-~l~ 93 (201)
T 2yjz_A 17 EKQGVVCIFGTGDFGKS-LGLKMLQCGYSVVFGSRNPQVSSLLPRGAEVL-CYSEAASRSDVIVLAVHREHYDFLA-ELA 93 (201)
Confidence 45789999999999994 44332 22221 2233466554 7778888999999999999998887 565
Q ss_pred cccCCCCEEEEecCCCc--------HHHHHhhCCCCCceEEEecCcHHhhhC-Cc-----EEEEeCCCCCHHHHHHHHHH
Q psy6714 198 PVFNESNLLISVAGGVP--------IKNMEQALPKNSRIIRAMPNTPALVRQ-GA-----SVFVRGSSASDQDAQTVINL 263 (303)
Q Consensus 198 ~~L~~g~IVVSiaaGV~--------ie~L~~~l~~~~~VVr~mPn~p~~v~~-G~-----til~~g~~~~~e~~e~V~~L 263 (303)
+. .++++||++++|++ .+.|++.++. .++++.|||+++.... |. +.++.+. ++++++.+++|
T Consensus 94 ~~-~~~~ivI~~~~G~~~~~~~~~~~~~l~~~~~~-~~vvra~~n~~a~~~~~g~l~g~~~~~~~g~--~~~~~~~v~~l 169 (201)
T 2yjz_A 94 DS-LKGRVLIDVSNNQKMNQYPESNAEYLAQLVPG-AHVVKAFNTISAWALQSGTLDASRQVFVCGN--DSKAKDRVMDI 169 (201)
Confidence 43 36789999999996 3677777774 5899999999987765 44 1334343 57788999999
Q ss_pred HHhcCCc
Q psy6714 264 FKSVGTC 270 (303)
Q Consensus 264 fs~iG~~ 270 (303)
|+.+|..
T Consensus 170 l~~~G~~ 176 (201)
T 2yjz_A 170 ARTLGLT 176 (201)
Confidence 9999974
No 29
>1vpd_A Tartronate semialdehyde reductase; structural genomics, MCSG, protein structure initiative, PSI, midwest center for structural genomics; HET: MSE TLA; 1.65A {Salmonella typhimurium} SCOP: a.100.1.1 c.2.1.6
Probab=99.49 E-value=2e-13 Score=125.16 Aligned_cols=145 Identities=17% Similarity=0.169 Sum_probs=103.1
Q ss_pred CCcEEEEcCChhhHHHHHHHHh----------hcHH---HHhhCCCeEecChHHhhcCCCEEEEeeC-CccHHHHH---H
Q psy6714 132 RSDKQIAGTTERGPGALIASLN----------IVSK---ATGTMGAKITFDNKEVTLNSEVIILAVK-PHIVPVAL---N 194 (303)
Q Consensus 132 ~mkIgIIGlG~MG~~~La~al~----------r~~e---~l~e~Gv~v~~d~~eav~~ADIVILAVp-P~~v~~VL---~ 194 (303)
+|||+|||+|.||.. ++..+. +..+ .+.+.|+....+..++++++|+||+||| +.+++.++ +
T Consensus 5 ~m~i~iiG~G~~G~~-~a~~l~~~g~~V~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~D~vi~~v~~~~~~~~~~~~~~ 83 (299)
T 1vpd_A 5 TMKVGFIGLGIMGKP-MSKNLLKAGYSLVVSDRNPEAIADVIAAGAETASTAKAIAEQCDVIITMLPNSPHVKEVALGEN 83 (299)
T ss_dssp -CEEEEECCSTTHHH-HHHHHHHTTCEEEEECSCHHHHHHHHHTTCEECSSHHHHHHHCSEEEECCSSHHHHHHHHHSTT
T ss_pred cceEEEECchHHHHH-HHHHHHhCCCEEEEEeCCHHHHHHHHHCCCeecCCHHHHHhCCCEEEEECCCHHHHHHHHhCcc
Confidence 479999999999994 554421 2222 3445688888888888999999999999 77889998 6
Q ss_pred hhccccCCCCEEEEecCCCc--HHHHHhhCCC-CCceEEE--ecCcHHhhhCCcEEEEeCCCCCHHHHHHHHHHHHhcCC
Q psy6714 195 DIKPVFNESNLLISVAGGVP--IKNMEQALPK-NSRIIRA--MPNTPALVRQGASVFVRGSSASDQDAQTVINLFKSVGT 269 (303)
Q Consensus 195 eI~~~L~~g~IVVSiaaGV~--ie~L~~~l~~-~~~VVr~--mPn~p~~v~~G~til~~g~~~~~e~~e~V~~Lfs~iG~ 269 (303)
++.+.++++++||++.++.. .+.|.+.++. +..++.. +++.+.....+.++++.+ +++..+.++++|+.+|.
T Consensus 84 ~l~~~l~~~~~vv~~s~~~~~~~~~l~~~~~~~g~~~~~~pv~~~~~~~~~~~~~~~~~~---~~~~~~~~~~ll~~~g~ 160 (299)
T 1vpd_A 84 GIIEGAKPGTVLIDMSSIAPLASREISDALKAKGVEMLDAPVSGGEPKAIDGTLSVMVGG---DKAIFDKYYDLMKAMAG 160 (299)
T ss_dssp CHHHHCCTTCEEEECSCCCHHHHHHHHHHHHTTTCEEEECCEESHHHHHHHTCEEEEEES---CHHHHHHHHHHHHTTEE
T ss_pred hHhhcCCCCCEEEECCCCCHHHHHHHHHHHHHcCCeEEEecCCCCHhHHhcCCEEEEeCC---CHHHHHHHHHHHHHHcC
Confidence 78777888999999988764 3567666643 2344433 344444555556666665 68889999999999997
Q ss_pred cE-EcCCCCchh
Q psy6714 270 CE-EVPEYLLDG 280 (303)
Q Consensus 270 ~v-~vdE~~~Da 280 (303)
.+ .+++.....
T Consensus 161 ~~~~~~~~~~~~ 172 (299)
T 1vpd_A 161 SVVHTGDIGAGN 172 (299)
T ss_dssp EEEEEESTTHHH
T ss_pred CeEEeCCcCHHH
Confidence 54 445543333
No 30
>1yj8_A Glycerol-3-phosphate dehydrogenase; SGPP, structural genomics, PSI; 2.85A {Plasmodium falciparum}
Probab=99.48 E-value=3.1e-13 Score=128.88 Aligned_cols=112 Identities=13% Similarity=-0.003 Sum_probs=86.4
Q ss_pred CeEecChHHhhcCCCEEEEeeCCccHHHHHHhhcc----ccCCCCEEEEecCCCcH---------HHHHhhCCCCCceEE
Q psy6714 164 AKITFDNKEVTLNSEVIILAVKPHIVPVALNDIKP----VFNESNLLISVAGGVPI---------KNMEQALPKNSRIIR 230 (303)
Q Consensus 164 v~v~~d~~eav~~ADIVILAVpP~~v~~VL~eI~~----~L~~g~IVVSiaaGV~i---------e~L~~~l~~~~~VVr 230 (303)
+..+.++.++++++|+||+|||++.+.+++.++.+ .++++++|||+++|+.. +.+.+.++ ....++
T Consensus 91 i~~~~~~~ea~~~aDvVilav~~~~~~~vl~~i~~~~~~~l~~~~ivvs~~~Gi~~~~~~~~~l~~~l~~~~~-~~~~v~ 169 (375)
T 1yj8_A 91 IVAHSDLASVINDADLLIFIVPCQYLESVLASIKESESIKIASHAKAISLTKGFIVKKNQMKLCSNYISDFLN-IPCSAL 169 (375)
T ss_dssp EEEESSTHHHHTTCSEEEECCCHHHHHHHHHHHTC---CCCCTTCEEEECCCSCEEETTEEECHHHHHHHHSS-SCEEEE
T ss_pred eEEECCHHHHHcCCCEEEEcCCHHHHHHHHHHHhhhhhccCCCCCEEEEeCCccccCCccccCHHHHHHHHcC-CCEEEE
Confidence 45667788888999999999999999999999998 88889999999999865 22344454 234678
Q ss_pred EecCcHHhhhCCcEEEEeCCCCCHHHHHHHHHHHHhcCCcEEcCCC
Q psy6714 231 AMPNTPALVRQGASVFVRGSSASDQDAQTVINLFKSVGTCEEVPEY 276 (303)
Q Consensus 231 ~mPn~p~~v~~G~til~~g~~~~~e~~e~V~~Lfs~iG~~v~vdE~ 276 (303)
.+|+++..+..|...++.....+++..+.++++|+..|..+++.++
T Consensus 170 ~gp~~a~~v~~g~~~~~~~~~~~~~~~~~v~~ll~~~g~~~~~~~d 215 (375)
T 1yj8_A 170 SGANIAMDVAMENFSEATIGGNDKDSLVIWQRVFDLPYFKINCVNE 215 (375)
T ss_dssp ECSCCHHHHHTTCCEEEEEECSCHHHHHHHHHHHCBTTEEEEEESC
T ss_pred eCCchHHHHHhCCCeEEEEecCCHHHHHHHHHHhCCCCeEEEEeCC
Confidence 8999998887775432222234678889999999999987666554
No 31
>1ks9_A KPA reductase;, 2-dehydropantoate 2-reductase; PANE, APBA, ketopantoate reductase, rossman fold, monomer, APO, oxidoreductase; 1.70A {Escherichia coli} SCOP: a.100.1.7 c.2.1.6 PDB: 1yon_A* 1yjq_A* 2ofp_A*
Probab=99.48 E-value=7.2e-14 Score=126.60 Aligned_cols=155 Identities=12% Similarity=0.186 Sum_probs=108.2
Q ss_pred CcEEEEcCChhhHHHHHHHHhh----------cHHH---HhhC---CC----eEecChHHhhcCCCEEEEeeCCccHHHH
Q psy6714 133 SDKQIAGTTERGPGALIASLNI----------VSKA---TGTM---GA----KITFDNKEVTLNSEVIILAVKPHIVPVA 192 (303)
Q Consensus 133 mkIgIIGlG~MG~~~La~al~r----------~~e~---l~e~---Gv----~v~~d~~eav~~ADIVILAVpP~~v~~V 192 (303)
|||+|||+|.||. .++..+.+ ..++ +... |. .+..+..++++++|+||+|||++.+.++
T Consensus 1 m~i~iiG~G~~G~-~~a~~l~~~g~~V~~~~r~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~v~~~~~~~v 79 (291)
T 1ks9_A 1 MKITVLGCGALGQ-LWLTALCKQGHEVQGWLRVPQPYCSVNLVETDGSIFNESLTANDPDFLATSDLLLVTLKAWQVSDA 79 (291)
T ss_dssp CEEEEECCSHHHH-HHHHHHHHTTCEEEEECSSCCSEEEEEEECTTSCEEEEEEEESCHHHHHTCSEEEECSCGGGHHHH
T ss_pred CeEEEECcCHHHH-HHHHHHHhCCCCEEEEEcCccceeeEEEEcCCCceeeeeeeecCccccCCCCEEEEEecHHhHHHH
Confidence 7899999999999 45554321 1111 1111 21 1223445678899999999999999999
Q ss_pred HHhhccccCCCCEEEEecCCCcH-HHHHhhCCC---C---CceEEEecCcHHhhhCCcEEEEeCCCCCHHHHHHHHHHHH
Q psy6714 193 LNDIKPVFNESNLLISVAGGVPI-KNMEQALPK---N---SRIIRAMPNTPALVRQGASVFVRGSSASDQDAQTVINLFK 265 (303)
Q Consensus 193 L~eI~~~L~~g~IVVSiaaGV~i-e~L~~~l~~---~---~~VVr~mPn~p~~v~~G~til~~g~~~~~e~~e~V~~Lfs 265 (303)
++++.++++++++||++.+|+.. +.+.+.++. + ....+.+| .+...+.|.+.+.... .+++..+.+.++|+
T Consensus 80 ~~~l~~~l~~~~~vv~~~~g~~~~~~l~~~~~~~~~g~~~~~~~~~~p-~~~~~~~g~~~i~~~~-~~~~~~~~~~~ll~ 157 (291)
T 1ks9_A 80 VKSLASTLPVTTPILLIHNGMGTIEELQNIQQPLLMGTTTHAARRDGN-VIIHVANGITHIGPAR-QQDGDYSYLADILQ 157 (291)
T ss_dssp HHHHHTTSCTTSCEEEECSSSCTTGGGTTCCSCEEEEEECCEEEEETT-EEEEEECCCEEEEESS-GGGTTCTHHHHHHH
T ss_pred HHHHHhhCCCCCEEEEecCCCCcHHHHHHhcCCeEEEEEeEccEEcCC-EEEEecccceEEccCC-CCcchHHHHHHHHH
Confidence 99999989889999999999976 466666653 0 01124455 4444556665554422 24556788999999
Q ss_pred hcCCcEEcCCC-------------CchhhhhhccchHH
Q psy6714 266 SVGTCEEVPEY-------------LLDGITGLSGSGPA 290 (303)
Q Consensus 266 ~iG~~v~vdE~-------------~~Da~tAlsGsgPA 290 (303)
.+|..+++.++ .+|.++|+++|+.+
T Consensus 158 ~~g~~~~~~~~~~~~~~~Kl~~n~~~n~~tal~~~~~g 195 (291)
T 1ks9_A 158 TVLPDVAWHNNIRAELWRKLAVNCVINPLTAIWNCPNG 195 (291)
T ss_dssp TTSSCEEECTTHHHHHHHHHHHHHHHHHHHHHTTCCGG
T ss_pred hcCCCCeecHHHHHHHHHHHeeeeeecHHHHHHCCCch
Confidence 99998888777 68999999988644
No 32
>1z82_A Glycerol-3-phosphate dehydrogenase; TM0378, structural genom joint center for structural genomics, JCSG, protein structu initiative, PSI; HET: MSE NDP G3H G3P; 2.00A {Thermotoga maritima}
Probab=99.48 E-value=1.7e-13 Score=128.72 Aligned_cols=137 Identities=12% Similarity=0.127 Sum_probs=99.8
Q ss_pred CCCcEEEEcCChhhHHHHHHHH----------hhcHH---HHhhCC-----------CeEecChHHhhcCCCEEEEeeCC
Q psy6714 131 NRSDKQIAGTTERGPGALIASL----------NIVSK---ATGTMG-----------AKITFDNKEVTLNSEVIILAVKP 186 (303)
Q Consensus 131 ~~mkIgIIGlG~MG~~~La~al----------~r~~e---~l~e~G-----------v~v~~d~~eav~~ADIVILAVpP 186 (303)
+.|||+|||+|.||+. ++..+ ++..+ .+.+.| +.++.++.+ ++++|+||+|||+
T Consensus 13 ~~~kI~iIG~G~mG~a-la~~L~~~G~~V~~~~r~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~-~~~aDvVil~vk~ 90 (335)
T 1z82_A 13 MEMRFFVLGAGSWGTV-FAQMLHENGEEVILWARRKEIVDLINVSHTSPYVEESKITVRATNDLEE-IKKEDILVIAIPV 90 (335)
T ss_dssp -CCEEEEECCSHHHHH-HHHHHHHTTCEEEEECSSHHHHHHHHHHSCBTTBTTCCCCSEEESCGGG-CCTTEEEEECSCG
T ss_pred cCCcEEEECcCHHHHH-HHHHHHhCCCeEEEEeCCHHHHHHHHHhCCcccCCCCeeeEEEeCCHHH-hcCCCEEEEECCH
Confidence 4589999999999995 44432 22222 233434 567778888 8899999999999
Q ss_pred ccHHHHHHhhccccCCCCEEEEecCCCcHHH-------HHhhCCCCCceEEEecCcHHhhhCCc-EEEEeCCCCCHHHHH
Q psy6714 187 HIVPVALNDIKPVFNESNLLISVAGGVPIKN-------MEQALPKNSRIIRAMPNTPALVRQGA-SVFVRGSSASDQDAQ 258 (303)
Q Consensus 187 ~~v~~VL~eI~~~L~~g~IVVSiaaGV~ie~-------L~~~l~~~~~VVr~mPn~p~~v~~G~-til~~g~~~~~e~~e 258 (303)
+++++++.++.+ ++++|||+++|+..+. +.+.++ ....++.+|+++..++.|. +.++.+.. + .+
T Consensus 91 ~~~~~v~~~l~~---~~~~vv~~~nGi~~~~~~~l~~~~~~~~~-~~~~~~~~P~~~~~~~~g~~~~~~~g~~-~---~~ 162 (335)
T 1z82_A 91 QYIREHLLRLPV---KPSMVLNLSKGIEIKTGKRVSEIVEEILG-CPYAVLSGPSHAEEVAKKLPTAVTLAGE-N---SK 162 (335)
T ss_dssp GGHHHHHTTCSS---CCSEEEECCCCCCTTTCCCHHHHHHHHTC-CCEEEEESSCCHHHHHTTCCEEEEEEET-T---HH
T ss_pred HHHHHHHHHhCc---CCCEEEEEeCCCCCCccCcHHHHHHHHcC-CceEEEECCccHHHHhCCCceEEEEEeh-h---HH
Confidence 999999998876 6889999999987532 223444 2357889999998888775 44444422 2 67
Q ss_pred HHHHHHHhcCCcEEcCCCC
Q psy6714 259 TVINLFKSVGTCEEVPEYL 277 (303)
Q Consensus 259 ~V~~Lfs~iG~~v~vdE~~ 277 (303)
.+.++|+..|..+++.++.
T Consensus 163 ~~~~ll~~~g~~~~~~~di 181 (335)
T 1z82_A 163 ELQKRISTEYFRVYTCEDV 181 (335)
T ss_dssp HHHHHHCCSSEEEEEESCH
T ss_pred HHHHHhCCCCEEEEecCch
Confidence 8999999999887776654
No 33
>2gf2_A Hibadh, 3-hydroxyisobutyrate dehydrogenase; structural genomics, structural genomics consortium, SGC, oxidoreductase; 2.38A {Homo sapiens} PDB: 2i9p_A*
Probab=99.46 E-value=4.8e-14 Score=129.12 Aligned_cols=144 Identities=15% Similarity=0.201 Sum_probs=98.1
Q ss_pred CcEEEEcCChhhHHHHHHHH----------hhcHH---HHhhCCCeEecChHHhhcCCCEEEEee-CCccHHHHHHhh--
Q psy6714 133 SDKQIAGTTERGPGALIASL----------NIVSK---ATGTMGAKITFDNKEVTLNSEVIILAV-KPHIVPVALNDI-- 196 (303)
Q Consensus 133 mkIgIIGlG~MG~~~La~al----------~r~~e---~l~e~Gv~v~~d~~eav~~ADIVILAV-pP~~v~~VL~eI-- 196 (303)
|||+|||+|.||.. ++..+ ++..+ .+.+.|+.+..++.++++++|+||+|| ++++++.++.++
T Consensus 1 m~i~iiG~G~mG~~-~a~~l~~~g~~V~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~Dvvi~~vp~~~~~~~v~~~~~~ 79 (296)
T 2gf2_A 1 MPVGFIGLGNMGNP-MAKNLMKHGYPLIIYDVFPDACKEFQDAGEQVVSSPADVAEKADRIITMLPTSINAIEAYSGANG 79 (296)
T ss_dssp CCEEEECCSTTHHH-HHHHHHHTTCCEEEECSSTHHHHHHHTTTCEECSSHHHHHHHCSEEEECCSSHHHHHHHHHSTTS
T ss_pred CeEEEEeccHHHHH-HHHHHHHCCCEEEEEeCCHHHHHHHHHcCCeecCCHHHHHhcCCEEEEeCCCHHHHHHHHhCchh
Confidence 68999999999994 55442 12222 345668888888888899999999999 577899998764
Q ss_pred -ccccCCCCEEEEecCCCcHHHHHh---hCCCCCceEEEecCcHHhhh-----CCcEEEEeCCCCCHHHHHHHHHHHHhc
Q psy6714 197 -KPVFNESNLLISVAGGVPIKNMEQ---ALPKNSRIIRAMPNTPALVR-----QGASVFVRGSSASDQDAQTVINLFKSV 267 (303)
Q Consensus 197 -~~~L~~g~IVVSiaaGV~ie~L~~---~l~~~~~VVr~mPn~p~~v~-----~G~til~~g~~~~~e~~e~V~~Lfs~i 267 (303)
.+.++++++||+ +++++.+.+++ .++.. .+.+++.|...+ .+...++.+ .+++..+.++++|+.+
T Consensus 80 ~~~~l~~~~~vv~-~s~~~~~~~~~~~~~~~~~---g~~~~~~p~~~g~~~a~~~~~~~~~~--~~~~~~~~v~~l~~~~ 153 (296)
T 2gf2_A 80 ILKKVKKGSLLID-SSTIDPAVSKELAKEVEKM---GAVFMDAPVSGGVGAARSGNLTFMVG--GVEDEFAAAQELLGCM 153 (296)
T ss_dssp GGGTCCTTCEEEE-CSCCCHHHHHHHHHHHHHT---TCEEEECCEESHHHHHHHTCEEEEEE--SCGGGHHHHHHHHTTT
T ss_pred HHhcCCCCCEEEE-CCCCCHHHHHHHHHHHHHc---CCEEEEcCCCCChhHHhcCcEEEEeC--CCHHHHHHHHHHHHHH
Confidence 345678899999 88998765543 23311 122344443332 454444443 2677889999999999
Q ss_pred CCcEEcCCCCchhhhhhccchHHH
Q psy6714 268 GTCEEVPEYLLDGITGLSGSGPAY 291 (303)
Q Consensus 268 G~~v~vdE~~~Da~tAlsGsgPAf 291 (303)
|..++. ++..|++++|
T Consensus 154 g~~~~~--------~~~~g~~~~~ 169 (296)
T 2gf2_A 154 GSNVVY--------CGAVGTGQAA 169 (296)
T ss_dssp EEEEEE--------EESTTHHHHH
T ss_pred cCCeEE--------eCCccHHHHH
Confidence 986433 2235677776
No 34
>1x0v_A GPD-C, GPDH-C, glycerol-3-phosphate dehydrogenase [NAD+], cytoplasmic; two independent domains, GXGXXG motif, oxidoreductase; 2.30A {Homo sapiens} PDB: 1x0x_A* 1wpq_A* 2pla_A*
Probab=99.46 E-value=6.9e-13 Score=124.52 Aligned_cols=111 Identities=14% Similarity=0.100 Sum_probs=87.0
Q ss_pred CeEecChHHhhcCCCEEEEeeCCccHHHHHHhhccccCCCCEEEEecCCCcH---------HHHHhhCCCCCceEEEecC
Q psy6714 164 AKITFDNKEVTLNSEVIILAVKPHIVPVALNDIKPVFNESNLLISVAGGVPI---------KNMEQALPKNSRIIRAMPN 234 (303)
Q Consensus 164 v~v~~d~~eav~~ADIVILAVpP~~v~~VL~eI~~~L~~g~IVVSiaaGV~i---------e~L~~~l~~~~~VVr~mPn 234 (303)
+..+.++.++++++|+||+|||++.+.++++++.++++++++|||+++|+.. +.+.+.++ ....++.+|+
T Consensus 78 ~~~~~~~~~~~~~aD~Vilav~~~~~~~v~~~i~~~l~~~~ivv~~~~Gi~~~~~~~~~l~~~l~~~~~-~~~~v~~gp~ 156 (354)
T 1x0v_A 78 VVAVPDVVQAAEDADILIFVVPHQFIGKICDQLKGHLKANATGISLIKGVDEGPNGLKLISEVIGERLG-IPMSVLMGAN 156 (354)
T ss_dssp EEEESSHHHHHTTCSEEEECCCGGGHHHHHHHHTTCSCTTCEEEECCCCBCSSSSSCCBHHHHHHHHHT-CCEEEEECSC
T ss_pred eEEEcCHHHHHcCCCEEEEeCCHHHHHHHHHHHHhhCCCCCEEEEECCccCCCCCccccHHHHHHHHcC-CCEEEEECCC
Confidence 4455677788899999999999999999999999989889999999998863 23444454 2356789999
Q ss_pred cHHhhhCCc-EEEEeCCCCCHHHHHHHHHHHHhcCCcEEcCCC
Q psy6714 235 TPALVRQGA-SVFVRGSSASDQDAQTVINLFKSVGTCEEVPEY 276 (303)
Q Consensus 235 ~p~~v~~G~-til~~g~~~~~e~~e~V~~Lfs~iG~~v~vdE~ 276 (303)
++..+..|. +.++.+ ..+++..+.++++|+..|..+++.++
T Consensus 157 ~a~~v~~g~~~~~~~~-~~~~~~~~~v~~ll~~~g~~~~~~~d 198 (354)
T 1x0v_A 157 IASEVADEKFCETTIG-CKDPAQGQLLKELMQTPNFRITVVQE 198 (354)
T ss_dssp CHHHHHTTCCEEEEEE-CSSHHHHHHHHHHHCBTTEEEEEESC
T ss_pred cHHHHHhcCCceEEEE-ECCHHHHHHHHHHhCCCCEEEEEcCC
Confidence 998887775 344443 34678889999999999987776654
No 35
>4e12_A Diketoreductase; oxidoreductase, NADH; HET: 1PE; 1.93A {Acinetobacter baylyi} PDB: 4dyd_A* 4e13_A*
Probab=99.46 E-value=1.2e-12 Score=120.48 Aligned_cols=113 Identities=8% Similarity=0.098 Sum_probs=92.1
Q ss_pred CeEecChHHhhcCCCEEEEeeCCc--cHHHHHHhhccccCCCCEEEEecCCCcHHHHHhhCCCCCceEEEecCcHHhhhC
Q psy6714 164 AKITFDNKEVTLNSEVIILAVKPH--IVPVALNDIKPVFNESNLLISVAGGVPIKNMEQALPKNSRIIRAMPNTPALVRQ 241 (303)
Q Consensus 164 v~v~~d~~eav~~ADIVILAVpP~--~v~~VL~eI~~~L~~g~IVVSiaaGV~ie~L~~~l~~~~~VVr~mPn~p~~v~~ 241 (303)
+..+.+..+++++||+||+|||++ ...+++.++.++++++++|+|..+++++..+.+.+....+++..||..|.....
T Consensus 73 i~~~~~~~~~~~~aDlVi~av~~~~~~~~~v~~~l~~~~~~~~il~s~tS~~~~~~la~~~~~~~~~ig~h~~~p~~~~~ 152 (283)
T 4e12_A 73 IRYSDDLAQAVKDADLVIEAVPESLDLKRDIYTKLGELAPAKTIFATNSSTLLPSDLVGYTGRGDKFLALHFANHVWVNN 152 (283)
T ss_dssp CEEESCHHHHTTTCSEEEECCCSCHHHHHHHHHHHHHHSCTTCEEEECCSSSCHHHHHHHHSCGGGEEEEEECSSTTTSC
T ss_pred eEEeCCHHHHhccCCEEEEeccCcHHHHHHHHHHHHhhCCCCcEEEECCCCCCHHHHHhhcCCCcceEEEccCCCcccCc
Confidence 466778888899999999999987 778888999888889999999999999998888776445789999887755444
Q ss_pred CcEEEEeCCCCCHHHHHHHHHHHHhcCCc-EEcCCCC
Q psy6714 242 GASVFVRGSSASDQDAQTVINLFKSVGTC-EEVPEYL 277 (303)
Q Consensus 242 G~til~~g~~~~~e~~e~V~~Lfs~iG~~-v~vdE~~ 277 (303)
. ..++++...+++.++.++++++.+|+. +.+..+.
T Consensus 153 l-vevv~~~~t~~~~~~~~~~l~~~~g~~~v~v~~~~ 188 (283)
T 4e12_A 153 T-AEVMGTTKTDPEVYQQVVEFASAIGMVPIELKKEK 188 (283)
T ss_dssp E-EEEEECTTSCHHHHHHHHHHHHHTTCEEEECSSCC
T ss_pred e-EEEEeCCCCCHHHHHHHHHHHHHcCCEEEEEecCC
Confidence 3 356777788999999999999999985 5564333
No 36
>3qsg_A NAD-binding phosphogluconate dehydrogenase-like P; structural genomics, PSI-biology, midwest center for structu genomics; 1.90A {Alicyclobacillus acidocaldarius subsp}
Probab=99.46 E-value=4.6e-13 Score=125.23 Aligned_cols=158 Identities=14% Similarity=0.148 Sum_probs=109.5
Q ss_pred CCcEEEEcCChhhHHHHHHHH-----------hhc--HH---HHhhCCCeEecChHHhhcCCCEEEEeeCCccHHHHHHh
Q psy6714 132 RSDKQIAGTTERGPGALIASL-----------NIV--SK---ATGTMGAKITFDNKEVTLNSEVIILAVKPHIVPVALND 195 (303)
Q Consensus 132 ~mkIgIIGlG~MG~~~La~al-----------~r~--~e---~l~e~Gv~v~~d~~eav~~ADIVILAVpP~~v~~VL~e 195 (303)
+|||||||+|.||.+ ++..+ +++ .+ .+.+.|+....++.+++++||+||+|||+....+++.+
T Consensus 24 ~~~I~iIG~G~mG~~-~A~~L~~~G~~~V~~~dr~~~~~~~~~~~~~g~~~~~~~~e~~~~aDvVi~~vp~~~~~~~~~~ 102 (312)
T 3qsg_A 24 AMKLGFIGFGEAASA-IASGLRQAGAIDMAAYDAASAESWRPRAEELGVSCKASVAEVAGECDVIFSLVTAQAALEVAQQ 102 (312)
T ss_dssp -CEEEEECCSHHHHH-HHHHHHHHSCCEEEEECSSCHHHHHHHHHHTTCEECSCHHHHHHHCSEEEECSCTTTHHHHHHH
T ss_pred CCEEEEECccHHHHH-HHHHHHHCCCCeEEEEcCCCCHHHHHHHHHCCCEEeCCHHHHHhcCCEEEEecCchhHHHHHHh
Confidence 689999999999995 44332 222 12 34567998888999999999999999999999999999
Q ss_pred hccccCCCCEEEEecCCCcHH---HHHhhCCC---CCceEEE--ecCcHHhhhCCcEEEEeCCCCCHHHHHHHHHHHHhc
Q psy6714 196 IKPVFNESNLLISVAGGVPIK---NMEQALPK---NSRIIRA--MPNTPALVRQGASVFVRGSSASDQDAQTVINLFKSV 267 (303)
Q Consensus 196 I~~~L~~g~IVVSiaaGV~ie---~L~~~l~~---~~~VVr~--mPn~p~~v~~G~til~~g~~~~~e~~e~V~~Lfs~i 267 (303)
+.+.++++++||++. ++... .+.+.+.. +..++.. +...+.. ....++++.++. + +.++++|+.+
T Consensus 103 l~~~l~~~~ivvd~s-t~~~~~~~~~~~~~~~~~~g~~~vd~pv~g~~~~~-~g~l~i~vgg~~---~--~~~~~ll~~~ 175 (312)
T 3qsg_A 103 AGPHLCEGALYADFT-SCSPAVKRAIGDVISRHRPSAQYAAVAVMSAVKPH-GHRVPLVVDGDG---A--RRFQAAFTLY 175 (312)
T ss_dssp HGGGCCTTCEEEECC-CCCHHHHHHHHHHHHHHCTTCEEEEEEECSCSTTT-GGGSEEEEESTT---H--HHHHHHHHTT
T ss_pred hHhhcCCCCEEEEcC-CCCHHHHHHHHHHHHhhcCCCeEEeccccCCchhh-cCCEEEEecCCh---H--HHHHHHHHHh
Confidence 999998999988654 34432 23332221 2333322 2222322 334667777642 2 8899999999
Q ss_pred CCcEEcCCCCchhhhhhccchHHHHHHHHH
Q psy6714 268 GTCEEVPEYLLDGITGLSGSGPAYRYEVTS 297 (303)
Q Consensus 268 G~~v~vdE~~~Da~tAlsGsgPAf~~~~ie 297 (303)
|..+++-.+......++-.|.++|++..+.
T Consensus 176 g~~~~~~g~~~g~a~~~Kl~~n~~~~~~~~ 205 (312)
T 3qsg_A 176 GCRIEVLDGEVGGAALLKMCRSAVLKGLEA 205 (312)
T ss_dssp TCEEEECCSSTTHHHHHHHHHHHHHHHHHH
T ss_pred CCCeEEcCCCCCHHHHHHHHHHHHHHHHHH
Confidence 987655444578888888999999854443
No 37
>1evy_A Glycerol-3-phosphate dehydrogenase; rossmann fold, oxidoreductase; HET: MYS; 1.75A {Leishmania mexicana} SCOP: a.100.1.6 c.2.1.6 PDB: 1evz_A* 1jdj_A* 1m66_A* 1m67_A* 1n1e_A* 1n1g_A*
Probab=99.45 E-value=8.8e-14 Score=131.75 Aligned_cols=141 Identities=13% Similarity=0.118 Sum_probs=101.5
Q ss_pred cEEEEcCChhhHHHHHHHH----------hhcHH---HHhhC--------------CCeEecChHHhhcCCCEEEEeeCC
Q psy6714 134 DKQIAGTTERGPGALIASL----------NIVSK---ATGTM--------------GAKITFDNKEVTLNSEVIILAVKP 186 (303)
Q Consensus 134 kIgIIGlG~MG~~~La~al----------~r~~e---~l~e~--------------Gv~v~~d~~eav~~ADIVILAVpP 186 (303)
||+|||+|.||.+ ++..+ ++..+ .+.+. ++.++.++.++++++|+||+|||+
T Consensus 17 kI~iIG~G~mG~~-la~~L~~~G~~V~~~~r~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~aDvVilav~~ 95 (366)
T 1evy_A 17 KAVVFGSGAFGTA-LAMVLSKKCREVCVWHMNEEEVRLVNEKRENVLFLKGVQLASNITFTSDVEKAYNGAEIILFVIPT 95 (366)
T ss_dssp EEEEECCSHHHHH-HHHHHTTTEEEEEEECSCHHHHHHHHHHTBCTTTSTTCBCCTTEEEESCHHHHHTTCSSEEECCCH
T ss_pred eEEEECCCHHHHH-HHHHHHhCCCEEEEEECCHHHHHHHHHcCcccccccccccccceeeeCCHHHHHcCCCEEEECCCh
Confidence 9999999999994 55443 12222 23222 345667788888999999999999
Q ss_pred ccHHHHHHh----hccccCC-CCEEEEecCCCcHH-------HHHhhCCCCCceEEEecCcHHhhhCCcE-EEEeCCCCC
Q psy6714 187 HIVPVALND----IKPVFNE-SNLLISVAGGVPIK-------NMEQALPKNSRIIRAMPNTPALVRQGAS-VFVRGSSAS 253 (303)
Q Consensus 187 ~~v~~VL~e----I~~~L~~-g~IVVSiaaGV~ie-------~L~~~l~~~~~VVr~mPn~p~~v~~G~t-il~~g~~~~ 253 (303)
+++.+++.+ +.+++++ +++||++++|+..+ .+.+.++.....++.+|+++..+..|.. .++.+ ..+
T Consensus 96 ~~~~~v~~~~~~gl~~~l~~~~~ivv~~~~gi~~~~~~~~~~~l~~~~~~~~~~v~~gp~~~~~~~~g~~~~~~~~-~~~ 174 (366)
T 1evy_A 96 QFLRGFFEKSGGNLIAYAKEKQVPVLVCTKGIERSTLKFPAEIIGEFLPSPLLSVLAGPSFAIEVATGVFTCVSIA-SAD 174 (366)
T ss_dssp HHHHHHHHHHCHHHHHHHHHHTCCEEECCCSCCTTTCCCHHHHHTTTSCGGGEEEEESSCCHHHHHTTCCEEEEEE-CSS
T ss_pred HHHHHHHHHhHHHHHHhcCccCCEEEEECCcCCCccccCHHHHHHHHCCCCcEEEEeCCChHHHHHhCCceEEEEe-cCC
Confidence 999999998 9888877 88999999888763 2333343212357888999987777753 33333 346
Q ss_pred HHHHHHHHHHHHhc--CCcEEcCCC
Q psy6714 254 DQDAQTVINLFKSV--GTCEEVPEY 276 (303)
Q Consensus 254 ~e~~e~V~~Lfs~i--G~~v~vdE~ 276 (303)
++..+.++.+|+.+ |..+++.++
T Consensus 175 ~~~~~~v~~ll~~~g~g~~~~~~~d 199 (366)
T 1evy_A 175 INVARRLQRIMSTGDRSFVCWATTD 199 (366)
T ss_dssp HHHHHHHHHHHSCTTSSEEEEEESC
T ss_pred HHHHHHHHHHhcCCCCeEEEEEcCC
Confidence 78889999999999 766655443
No 38
>1txg_A Glycerol-3-phosphate dehydrogenase [NAD(P)+]; oxidoreductase; 1.70A {Archaeoglobus fulgidus} SCOP: a.100.1.6 c.2.1.6
Probab=99.44 E-value=4.9e-13 Score=124.07 Aligned_cols=141 Identities=18% Similarity=0.202 Sum_probs=103.5
Q ss_pred CcEEEEcCChhhHHHHHHHH----------hh--cHHH---HhhCCC-----------eEec--ChHHhhcCCCEEEEee
Q psy6714 133 SDKQIAGTTERGPGALIASL----------NI--VSKA---TGTMGA-----------KITF--DNKEVTLNSEVIILAV 184 (303)
Q Consensus 133 mkIgIIGlG~MG~~~La~al----------~r--~~e~---l~e~Gv-----------~v~~--d~~eav~~ADIVILAV 184 (303)
|||+|||+|.||.. ++..+ ++ ..++ +.+.|. .+.. ++.++++++|+||+||
T Consensus 1 m~I~iiG~G~mG~~-~a~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~D~vi~~v 79 (335)
T 1txg_A 1 MIVSILGAGAMGSA-LSVPLVDNGNEVRIWGTEFDTEILKSISAGREHPRLGVKLNGVEIFWPEQLEKCLENAEVVLLGV 79 (335)
T ss_dssp CEEEEESCCHHHHH-HHHHHHHHCCEEEEECCGGGHHHHHHHHTTCCBTTTTBCCCSEEEECGGGHHHHHTTCSEEEECS
T ss_pred CEEEEECcCHHHHH-HHHHHHhCCCeEEEEEccCCHHHHHHHHHhCcCcccCccccceEEecHHhHHHHHhcCCEEEEcC
Confidence 78999999999994 55432 23 3332 334442 4445 6677889999999999
Q ss_pred CCccHHHHHHhhccccCCCCEEEEecCCC------cHHHHHhhCCCC-----CceEEEecCcHHhhhCCc-EEEEeCCCC
Q psy6714 185 KPHIVPVALNDIKPVFNESNLLISVAGGV------PIKNMEQALPKN-----SRIIRAMPNTPALVRQGA-SVFVRGSSA 252 (303)
Q Consensus 185 pP~~v~~VL~eI~~~L~~g~IVVSiaaGV------~ie~L~~~l~~~-----~~VVr~mPn~p~~v~~G~-til~~g~~~ 252 (303)
|++.+.+++.++.+ ++++++||++++|+ ..+.+.+.++.. ...++.+|+.+..+..|. +.++.+. .
T Consensus 80 ~~~~~~~v~~~i~~-l~~~~~vv~~~ng~~~~~~~~~~~l~~~~~~~~g~~~~~~~~~~p~~~~~~~~g~~~~~~~~~-~ 157 (335)
T 1txg_A 80 STDGVLPVMSRILP-YLKDQYIVLISKGLIDFDNSVLTVPEAVWRLKHDLRERTVAITGPAIAREVAKRMPTTVVFSS-P 157 (335)
T ss_dssp CGGGHHHHHHHHTT-TCCSCEEEECCCSEEEETTEEEEHHHHHHTTSTTCGGGEEEEESSCCHHHHHTTCCEEEEEEC-S
T ss_pred ChHHHHHHHHHHhc-CCCCCEEEEEcCcCccCCCCcCccHHHHHHHhcCCCCcEEEEECCCcHHHHHccCCcEEEEEe-C
Confidence 99999999999999 88899999999898 445666665431 135678899988777665 3444433 3
Q ss_pred CHHHHHHHHHHHHhcCCcEEcCCC
Q psy6714 253 SDQDAQTVINLFKSVGTCEEVPEY 276 (303)
Q Consensus 253 ~~e~~e~V~~Lfs~iG~~v~vdE~ 276 (303)
+++..+.+.++|+..|..+++.++
T Consensus 158 ~~~~~~~~~~ll~~~g~~~~~~~d 181 (335)
T 1txg_A 158 SESSANKMKEIFETEYFGVEVTTD 181 (335)
T ss_dssp CHHHHHHHHHHHCBTTEEEEEESC
T ss_pred CHHHHHHHHHHhCCCcEEEEecCc
Confidence 678889999999999987666544
No 39
>2raf_A Putative dinucleotide-binding oxidoreductase; NP_786167.1, NADP oxidoreductase coenzyme F420-dependent, structural genomics; HET: MSE NAP; 1.60A {Lactobacillus plantarum WCFS1}
Probab=99.43 E-value=2e-13 Score=120.74 Aligned_cols=135 Identities=16% Similarity=0.270 Sum_probs=96.2
Q ss_pred ccCCCcEEEEcCChhhHHHHHHHHhhcHHHHhhCCCe--EecChHHhhcCCCEEEEeeCCccHHHHHHhhccccCCCCEE
Q psy6714 129 RWNRSDKQIAGTTERGPGALIASLNIVSKATGTMGAK--ITFDNKEVTLNSEVIILAVKPHIVPVALNDIKPVFNESNLL 206 (303)
Q Consensus 129 ~~~~mkIgIIGlG~MG~~~La~al~r~~e~l~e~Gv~--v~~d~~eav~~ADIVILAVpP~~v~~VL~eI~~~L~~g~IV 206 (303)
...+|||+|||+|.||. .++..+ .+.|.. ...-..+++++||+||+|||++.+.++++++.+.++ +++|
T Consensus 16 ~~~~~~I~iiG~G~mG~-~la~~l-------~~~g~~V~~~~~~~~~~~~aD~vi~av~~~~~~~v~~~l~~~~~-~~~v 86 (209)
T 2raf_A 16 YFQGMEITIFGKGNMGQ-AIGHNF-------EIAGHEVTYYGSKDQATTLGEIVIMAVPYPALAALAKQYATQLK-GKIV 86 (209)
T ss_dssp ----CEEEEECCSHHHH-HHHHHH-------HHTTCEEEEECTTCCCSSCCSEEEECSCHHHHHHHHHHTHHHHT-TSEE
T ss_pred ccCCCEEEEECCCHHHH-HHHHHH-------HHCCCEEEEEcCCHHHhccCCEEEEcCCcHHHHHHHHHHHHhcC-CCEE
Confidence 35678999999999999 465443 233433 222223367899999999999999999999988887 8999
Q ss_pred EEecCCCc---------------HHHHHhhCCCCCceEEE-----ecCcHHhhhCC---cEEEEeCCCCCHHHHHHHHHH
Q psy6714 207 ISVAGGVP---------------IKNMEQALPKNSRIIRA-----MPNTPALVRQG---ASVFVRGSSASDQDAQTVINL 263 (303)
Q Consensus 207 VSiaaGV~---------------ie~L~~~l~~~~~VVr~-----mPn~p~~v~~G---~til~~g~~~~~e~~e~V~~L 263 (303)
|++++|++ .+.+++.++ +.++++. +|+.+.....+ ..+++.++ +++..+.++++
T Consensus 87 i~~~~g~~~~~~~~l~~~~~~~~~~~l~~~l~-~~~vv~~~~~~~~p~~~~~~~~g~~~~~~~~~g~--~~~~~~~v~~l 163 (209)
T 2raf_A 87 VDITNPLNFDTWDDLVVPADSSAAQELQQQLP-DSQVLKAFNTTFAATLQSGQVNGKEPTTVLVAGN--DDSAKQRFTRA 163 (209)
T ss_dssp EECCCCBCTTTSSSBSSCTTCCHHHHHHHHCT-TSEEEECSTTSCHHHHHHSEETTTEECEEEEEES--CHHHHHHHHHH
T ss_pred EEECCCCCccccccccCCCCCcHHHHHHHHCC-CCcEEEeeecccHhhccccccCCCCCceeEEcCC--CHHHHHHHHHH
Confidence 99999886 577888887 3678885 56666544444 23334432 67889999999
Q ss_pred HHhcCC-cEEcCC
Q psy6714 264 FKSVGT-CEEVPE 275 (303)
Q Consensus 264 fs~iG~-~v~vdE 275 (303)
|+.+|. ++++++
T Consensus 164 l~~~G~~~~~~~~ 176 (209)
T 2raf_A 164 LADSPLEVKDAGK 176 (209)
T ss_dssp TTTSSCEEEEEES
T ss_pred HHHcCCceEeCCC
Confidence 999996 455554
No 40
>3obb_A Probable 3-hydroxyisobutyrate dehydrogenase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics; HET: EPE; 2.20A {Pseudomonas aeruginosa} PDB: 3q3c_A*
Probab=99.43 E-value=3.2e-13 Score=126.48 Aligned_cols=141 Identities=13% Similarity=0.197 Sum_probs=96.8
Q ss_pred CCCcEEEEcCChhhHHHHHHH---------HhhcHH---HHhhCCCeEecChHHhhcCCCEEEEeeC-CccHHHHHHh--
Q psy6714 131 NRSDKQIAGTTERGPGALIAS---------LNIVSK---ATGTMGAKITFDNKEVTLNSEVIILAVK-PHIVPVALND-- 195 (303)
Q Consensus 131 ~~mkIgIIGlG~MG~~~La~a---------l~r~~e---~l~e~Gv~v~~d~~eav~~ADIVILAVp-P~~v~~VL~e-- 195 (303)
.|+||||||||.||.+|.... ++++.+ .+.+.|+....++.|+++.||+||+||+ +.++++|+..
T Consensus 2 ~M~kIgfIGlG~MG~~mA~~L~~~G~~v~v~dr~~~~~~~l~~~Ga~~a~s~~e~~~~~dvv~~~l~~~~~v~~V~~~~~ 81 (300)
T 3obb_A 2 HMKQIAFIGLGHMGAPMATNLLKAGYLLNVFDLVQSAVDGLVAAGASAARSARDAVQGADVVISMLPASQHVEGLYLDDD 81 (300)
T ss_dssp -CCEEEEECCSTTHHHHHHHHHHTTCEEEEECSSHHHHHHHHHTTCEECSSHHHHHTTCSEEEECCSCHHHHHHHHHSSS
T ss_pred CcCEEEEeeehHHHHHHHHHHHhCCCeEEEEcCCHHHHHHHHHcCCEEcCCHHHHHhcCCceeecCCchHHHHHHHhchh
Confidence 477999999999999764433 234443 4567899999999999999999999997 6778888854
Q ss_pred -hccccCCCCEEEEecCCCcH---HHHHhhCCC-CCceEEE-ecCcHHhhhCC-cEEEEeCCCCCHHHHHHHHHHHHhcC
Q psy6714 196 -IKPVFNESNLLISVAGGVPI---KNMEQALPK-NSRIIRA-MPNTPALVRQG-ASVFVRGSSASDQDAQTVINLFKSVG 268 (303)
Q Consensus 196 -I~~~L~~g~IVVSiaaGV~i---e~L~~~l~~-~~~VVr~-mPn~p~~v~~G-~til~~g~~~~~e~~e~V~~Lfs~iG 268 (303)
+.+.+.++++||.+.. ++. ..+.+.+.. +..++.+ +-..+.....| .++++.| +++.++.++.+|+.+|
T Consensus 82 g~~~~~~~g~iiId~sT-~~p~~~~~~a~~~~~~G~~~lDaPVsGg~~~A~~G~L~imvGG---~~~~~~~~~p~l~~~g 157 (300)
T 3obb_A 82 GLLAHIAPGTLVLECST-IAPTSARKIHAAARERGLAMLDAPVSGGTAGAAAGTLTFMVGG---DAEALEKARPLFEAMG 157 (300)
T ss_dssp SSTTSCCC-CEEEECSC-CCHHHHHHHHHHHHTTTCEEEECCEESCHHHHHHTCEEEEEES---CHHHHHHHHHHHHHHE
T ss_pred hhhhcCCCCCEEEECCC-CCHHHHHHHHHHHHHcCCEEEecCCCCCHHHHHhCCEEEEEeC---CHHHHHHHHHHHHHhC
Confidence 5666778999995543 443 345554432 2333332 11222223344 5677777 7899999999999999
Q ss_pred Cc-EEcCC
Q psy6714 269 TC-EEVPE 275 (303)
Q Consensus 269 ~~-v~vdE 275 (303)
.. +++-+
T Consensus 158 ~~i~~~G~ 165 (300)
T 3obb_A 158 RNIFHAGP 165 (300)
T ss_dssp EEEEEEES
T ss_pred CCEEEeCC
Confidence 74 55543
No 41
>3i83_A 2-dehydropantoate 2-reductase; structural genomics, oxidoreductase, NADP, pantothenate BIOS PSI-2, protein structure initiative; 1.90A {Methylococcus capsulatus}
Probab=99.41 E-value=1.1e-12 Score=122.59 Aligned_cols=159 Identities=13% Similarity=0.186 Sum_probs=107.9
Q ss_pred CCCcEEEEcCChhhHHHHHHHHhh----------c-HHHHhhCCCe---------------EecChHHhhcCCCEEEEee
Q psy6714 131 NRSDKQIAGTTERGPGALIASLNI----------V-SKATGTMGAK---------------ITFDNKEVTLNSEVIILAV 184 (303)
Q Consensus 131 ~~mkIgIIGlG~MG~~~La~al~r----------~-~e~l~e~Gv~---------------v~~d~~eav~~ADIVILAV 184 (303)
|+|||+|||+|.||+ .++..+.+ . .+.+++.|+. ++.+..++.+++|+||+||
T Consensus 1 M~mkI~IiGaGaiG~-~~a~~L~~~g~~V~~~~r~~~~~i~~~Gl~~~~~~~g~~~~~~~~~~~~~~~~~~~~DlVilav 79 (320)
T 3i83_A 1 MSLNILVIGTGAIGS-FYGALLAKTGHCVSVVSRSDYETVKAKGIRIRSATLGDYTFRPAAVVRSAAELETKPDCTLLCI 79 (320)
T ss_dssp --CEEEEESCCHHHH-HHHHHHHHTTCEEEEECSTTHHHHHHHCEEEEETTTCCEEECCSCEESCGGGCSSCCSEEEECC
T ss_pred CCCEEEEECcCHHHH-HHHHHHHhCCCeEEEEeCChHHHHHhCCcEEeecCCCcEEEeeeeeECCHHHcCCCCCEEEEec
Confidence 358999999999999 56654321 1 1334444432 2345556656899999999
Q ss_pred CCccHHHHHHhhccccCCCCEEEEecCCCc-HHHHHhhCCCCCceEEEecCcH------HhhhC-CcEEEEeC--CCCCH
Q psy6714 185 KPHIVPVALNDIKPVFNESNLLISVAGGVP-IKNMEQALPKNSRIIRAMPNTP------ALVRQ-GASVFVRG--SSASD 254 (303)
Q Consensus 185 pP~~v~~VL~eI~~~L~~g~IVVSiaaGV~-ie~L~~~l~~~~~VVr~mPn~p------~~v~~-G~til~~g--~~~~~ 254 (303)
|++++.++++++++++.++++||++++|+. .+.+.+.++. ..++....... ..+.. +...+..+ +..+.
T Consensus 80 K~~~~~~~l~~l~~~l~~~t~Iv~~~nGi~~~~~l~~~~~~-~~vl~g~~~~~a~~~~pg~v~~~~~~~~~ig~~~~~~~ 158 (320)
T 3i83_A 80 KVVEGADRVGLLRDAVAPDTGIVLISNGIDIEPEVAAAFPD-NEVISGLAFIGVTRTAPGEIWHQAYGRLMLGNYPGGVS 158 (320)
T ss_dssp CCCTTCCHHHHHTTSCCTTCEEEEECSSSSCSHHHHHHSTT-SCEEEEEEEEEEEEEETTEEEEEEEEEEEEEESSSCCC
T ss_pred CCCChHHHHHHHHhhcCCCCEEEEeCCCCChHHHHHHHCCC-CcEEEEEEEeceEEcCCCEEEECCCCEEEEecCCCCcc
Confidence 999999999999999988999999999997 4788898885 35655543332 12211 22223332 23345
Q ss_pred HHHHHHHHHHHhcCCcEEcCCCC-------------chhhhhhccchHHH
Q psy6714 255 QDAQTVINLFKSVGTCEEVPEYL-------------LDGITGLSGSGPAY 291 (303)
Q Consensus 255 e~~e~V~~Lfs~iG~~v~vdE~~-------------~Da~tAlsGsgPAf 291 (303)
+..+.+.++|+..|..++++++. ++.++++.+|.-+-
T Consensus 159 ~~~~~l~~~l~~~~~~~~~~~di~~~~w~Kl~~N~~~N~ltal~~~~~g~ 208 (320)
T 3i83_A 159 ERVKTLAAAFEEAGIDGIATENITTARWQKCVWNAAFNPLSVLSGGLDTL 208 (320)
T ss_dssp HHHHHHHHHHHHTTSCEEECSCHHHHHHHHHHHHHHHHHHHHHTTSCCHH
T ss_pred HHHHHHHHHHHhCCCCceECHHHHHHHHHHHHHHHhhhHHHHHHCCCHHH
Confidence 67789999999999887776554 34567777764433
No 42
>2cvz_A Dehydrogenase, 3-hydroxyisobutyrate dehydrogenase; valine catabolism, NADP+, structural GEN riken structural genomics/proteomics initiative; HET: NDP; 1.80A {Thermus thermophilus} SCOP: a.100.1.1 c.2.1.6 PDB: 1wp4_A*
Probab=99.41 E-value=3e-13 Score=122.97 Aligned_cols=159 Identities=12% Similarity=0.106 Sum_probs=107.3
Q ss_pred CCcEEEEcCChhhHHHHHHHHh---------hcHH---HHhhCCCeEecChHHhhcCCCEEEEeeCCc-cHHHHHHhhcc
Q psy6714 132 RSDKQIAGTTERGPGALIASLN---------IVSK---ATGTMGAKITFDNKEVTLNSEVIILAVKPH-IVPVALNDIKP 198 (303)
Q Consensus 132 ~mkIgIIGlG~MG~~~La~al~---------r~~e---~l~e~Gv~v~~d~~eav~~ADIVILAVpP~-~v~~VL~eI~~ 198 (303)
||||+|||+|.||.. ++..+. +..+ .+.+.|+.... +.++++++|+||+|||.. ++..+++++.+
T Consensus 1 M~~i~iiG~G~~G~~-~a~~l~~g~~V~~~~~~~~~~~~~~~~g~~~~~-~~~~~~~~D~vi~~v~~~~~~~~v~~~l~~ 78 (289)
T 2cvz_A 1 MEKVAFIGLGAMGYP-MAGHLARRFPTLVWNRTFEKALRHQEEFGSEAV-PLERVAEARVIFTCLPTTREVYEVAEALYP 78 (289)
T ss_dssp -CCEEEECCSTTHHH-HHHHHHTTSCEEEECSSTHHHHHHHHHHCCEEC-CGGGGGGCSEEEECCSSHHHHHHHHHHHTT
T ss_pred CCeEEEEcccHHHHH-HHHHHhCCCeEEEEeCCHHHHHHHHHCCCcccC-HHHHHhCCCEEEEeCCChHHHHHHHHHHHh
Confidence 579999999999994 554432 1112 23344666555 777888999999999966 59999998888
Q ss_pred ccCCCCEEEEecCCC--cHHHHHhhCCC-CCceEEEecCc--HHhhhCCc-EEEEeCCCCCHHHHHHHHHHHHhcCCc-E
Q psy6714 199 VFNESNLLISVAGGV--PIKNMEQALPK-NSRIIRAMPNT--PALVRQGA-SVFVRGSSASDQDAQTVINLFKSVGTC-E 271 (303)
Q Consensus 199 ~L~~g~IVVSiaaGV--~ie~L~~~l~~-~~~VVr~mPn~--p~~v~~G~-til~~g~~~~~e~~e~V~~Lfs~iG~~-v 271 (303)
.++++++||++..+. +.+.+.+.++. +..++.. |.. +.....|. ++++.+ +++..+.++++| .+|.. +
T Consensus 79 ~l~~~~~vv~~s~~~~~~~~~l~~~~~~~g~~~~~~-p~~~~~~~~~~g~~~~~~~~---~~~~~~~~~~ll-~~g~~~~ 153 (289)
T 2cvz_A 79 YLREGTYWVDATSGEPEASRRLAERLREKGVTYLDA-PVSGGTSGAEAGTLTVMLGG---PEEAVERVRPFL-AYAKKVV 153 (289)
T ss_dssp TCCTTEEEEECSCCCHHHHHHHHHHHHTTTEEEEEC-CEESHHHHHHHTCEEEEEES---CHHHHHHHGGGC-TTEEEEE
T ss_pred hCCCCCEEEECCCCCHHHHHHHHHHHHHcCCEEEEe-cCCCChhHHhhCCeEEEECC---CHHHHHHHHHHH-hhcCCeE
Confidence 888899988665443 23566666643 2345554 533 33344555 444443 688889999999 99974 6
Q ss_pred EcCCCCchhhhhhccchHHHHHHHHHhh
Q psy6714 272 EVPEYLLDGITGLSGSGPAYRYEVTSNE 299 (303)
Q Consensus 272 ~vdE~~~Da~tAlsGsgPAf~~~~ie~~ 299 (303)
++++. .....+-.+.++|.+.++..+
T Consensus 154 ~~~~~--~~~~~~k~~~n~~~~~~~~~~ 179 (289)
T 2cvz_A 154 HVGPV--GAGHAVKAINNALLAVNLWAA 179 (289)
T ss_dssp EEEST--THHHHHHHHHHHHHHHHHHHH
T ss_pred EcCCC--cHHHHHHHHHHHHHHHHHHHH
Confidence 66654 345555667888877776655
No 43
>3cky_A 2-hydroxymethyl glutarate dehydrogenase; rossmann fold, two domain enzyme, oxidoreductase; 2.30A {Eubacterium barkeri}
Probab=99.41 E-value=6.4e-13 Score=121.90 Aligned_cols=139 Identities=14% Similarity=0.226 Sum_probs=97.4
Q ss_pred CCcEEEEcCChhhHHHHHHHHh----------hcHH---HHhhCCCeEecChHHhhcCCCEEEEeeC-CccHHHHHH---
Q psy6714 132 RSDKQIAGTTERGPGALIASLN----------IVSK---ATGTMGAKITFDNKEVTLNSEVIILAVK-PHIVPVALN--- 194 (303)
Q Consensus 132 ~mkIgIIGlG~MG~~~La~al~----------r~~e---~l~e~Gv~v~~d~~eav~~ADIVILAVp-P~~v~~VL~--- 194 (303)
+|||+|||+|.||.. ++..+. +..+ .+.+.|+....++.++++++|+||+||| +.+++.++.
T Consensus 4 ~~~i~iiG~G~~G~~-~a~~l~~~g~~V~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~D~vi~~vp~~~~~~~v~~~~~ 82 (301)
T 3cky_A 4 SIKIGFIGLGAMGKP-MAINLLKEGVTVYAFDLMEANVAAVVAQGAQACENNQKVAAASDIIFTSLPNAGIVETVMNGPG 82 (301)
T ss_dssp CCEEEEECCCTTHHH-HHHHHHHTTCEEEEECSSHHHHHHHHTTTCEECSSHHHHHHHCSEEEECCSSHHHHHHHHHSTT
T ss_pred CCEEEEECccHHHHH-HHHHHHHCCCeEEEEeCCHHHHHHHHHCCCeecCCHHHHHhCCCEEEEECCCHHHHHHHHcCcc
Confidence 589999999999994 554421 2222 3445688887888888999999999995 677999985
Q ss_pred hhccccCCCCEEEEecCCC--cHHHHHhhCCC-CCceEEEecCcHH--hhhCCc-EEEEeCCCCCHHHHHHHHHHHHhcC
Q psy6714 195 DIKPVFNESNLLISVAGGV--PIKNMEQALPK-NSRIIRAMPNTPA--LVRQGA-SVFVRGSSASDQDAQTVINLFKSVG 268 (303)
Q Consensus 195 eI~~~L~~g~IVVSiaaGV--~ie~L~~~l~~-~~~VVr~mPn~p~--~v~~G~-til~~g~~~~~e~~e~V~~Lfs~iG 268 (303)
++.+.++++++||++.++. +.+.|.+.++. +..++. .|..+. ....|. ++++.+ +++..+.+.++|+.+|
T Consensus 83 ~l~~~l~~~~~vv~~~~~~~~~~~~l~~~~~~~g~~~~~-~p~~~~~~~a~~g~~~~~~~g---~~~~~~~v~~ll~~~g 158 (301)
T 3cky_A 83 GVLSACKAGTVIVDMSSVSPSSTLKMAKVAAEKGIDYVD-APVSGGTKGAEAGTLTIMVGA---SEAVFEKIQPVLSVIG 158 (301)
T ss_dssp CHHHHSCTTCEEEECCCCCHHHHHHHHHHHHHTTCEEEE-CCEESHHHHHHHTCEEEEEES---CHHHHHHHHHHHHHHE
T ss_pred hHhhcCCCCCEEEECCCCCHHHHHHHHHHHHHcCCeEEE-ccCCCCHHHHHcCCeEEEECC---CHHHHHHHHHHHHHhc
Confidence 7877788899999998888 45667666542 223332 232221 122354 555554 6888999999999999
Q ss_pred CcEE-cCC
Q psy6714 269 TCEE-VPE 275 (303)
Q Consensus 269 ~~v~-vdE 275 (303)
..++ +.+
T Consensus 159 ~~~~~~~~ 166 (301)
T 3cky_A 159 KDIYHVGD 166 (301)
T ss_dssp EEEEEEES
T ss_pred CCEEEeCC
Confidence 7644 443
No 44
>2h78_A Hibadh, 3-hydroxyisobutyrate dehydrogenase; APC6014, pseudomonas aeruginosa PA01, PSI-2, structural genomics; HET: PG4; 2.20A {Pseudomonas aeruginosa} PDB: 3cum_A 3obb_A* 3q3c_A*
Probab=99.40 E-value=4.2e-13 Score=123.74 Aligned_cols=149 Identities=13% Similarity=0.209 Sum_probs=103.3
Q ss_pred CCCcEEEEcCChhhHHHHHHHH----------hhcHH---HHhhCCCeEecChHHhhcCCCEEEEeeC-CccHHHHHH--
Q psy6714 131 NRSDKQIAGTTERGPGALIASL----------NIVSK---ATGTMGAKITFDNKEVTLNSEVIILAVK-PHIVPVALN-- 194 (303)
Q Consensus 131 ~~mkIgIIGlG~MG~~~La~al----------~r~~e---~l~e~Gv~v~~d~~eav~~ADIVILAVp-P~~v~~VL~-- 194 (303)
+||||+|||+|.||.+ ++..+ +++.+ .+.+.|+....++.++++++|+||+||| +.++++++.
T Consensus 2 ~m~~I~iiG~G~mG~~-~a~~l~~~G~~V~~~d~~~~~~~~~~~~g~~~~~~~~~~~~~aDvvi~~vp~~~~~~~v~~~~ 80 (302)
T 2h78_A 2 HMKQIAFIGLGHMGAP-MATNLLKAGYLLNVFDLVQSAVDGLVAAGASAARSARDAVQGADVVISMLPASQHVEGLYLDD 80 (302)
T ss_dssp -CCEEEEECCSTTHHH-HHHHHHHTTCEEEEECSSHHHHHHHHHTTCEECSSHHHHHTTCSEEEECCSCHHHHHHHHHSS
T ss_pred CCCEEEEEeecHHHHH-HHHHHHhCCCeEEEEcCCHHHHHHHHHCCCeEcCCHHHHHhCCCeEEEECCCHHHHHHHHcCc
Confidence 4789999999999994 55432 22222 4556799888899999999999999996 778999998
Q ss_pred -hhccccCCCCEEEEecCCCcH--HHHHhhCCC-CCceEEEecCcHHhh--hCCc-EEEEeCCCCCHHHHHHHHHHHHhc
Q psy6714 195 -DIKPVFNESNLLISVAGGVPI--KNMEQALPK-NSRIIRAMPNTPALV--RQGA-SVFVRGSSASDQDAQTVINLFKSV 267 (303)
Q Consensus 195 -eI~~~L~~g~IVVSiaaGV~i--e~L~~~l~~-~~~VVr~mPn~p~~v--~~G~-til~~g~~~~~e~~e~V~~Lfs~i 267 (303)
++.+.+.++++||++...... +.+.+.++. +..++.. |+.+... ..+. ++++.+ +++..+.++++|+.+
T Consensus 81 ~~~~~~l~~~~~vi~~st~~~~~~~~l~~~~~~~g~~~~~~-pv~~~~~~~~~g~l~~~~~g---~~~~~~~~~~ll~~~ 156 (302)
T 2h78_A 81 DGLLAHIAPGTLVLECSTIAPTSARKIHAAARERGLAMLDA-PVSGGTAGAAAGTLTFMVGG---DAEALEKARPLFEAM 156 (302)
T ss_dssp SCGGGSSCSSCEEEECSCCCHHHHHHHHHHHHHTTCCEEEC-CEESCHHHHHHTCEEEEEES---CHHHHHHHHHHHHHH
T ss_pred hhHHhcCCCCcEEEECCCCCHHHHHHHHHHHHHcCCEEEEE-EccCChhhHhcCCceEEeCC---CHHHHHHHHHHHHHh
Confidence 888888899999876543322 345554432 3455653 5544322 2333 445554 788999999999999
Q ss_pred CC-cEEcCCCCchhhhhh
Q psy6714 268 GT-CEEVPEYLLDGITGL 284 (303)
Q Consensus 268 G~-~v~vdE~~~Da~tAl 284 (303)
|. ++.+.+..+...+-+
T Consensus 157 g~~~~~~~~~~~~~~~Kl 174 (302)
T 2h78_A 157 GRNIFHAGPDGAGQVAKV 174 (302)
T ss_dssp EEEEEEEESTTHHHHHHH
T ss_pred CCCeEEcCCccHHHHHHH
Confidence 97 456666555554444
No 45
>2uyy_A N-PAC protein; long-chain dehydrogenase, cytokine; HET: NA7; 2.5A {Homo sapiens}
Probab=99.40 E-value=2.2e-12 Score=119.61 Aligned_cols=162 Identities=12% Similarity=0.185 Sum_probs=108.1
Q ss_pred CCcEEEEcCChhhHHHHHHHHh----------hcH---HHHhhCCCeEecChHHhhcCCCEEEEeeC-CccHHHHHHhhc
Q psy6714 132 RSDKQIAGTTERGPGALIASLN----------IVS---KATGTMGAKITFDNKEVTLNSEVIILAVK-PHIVPVALNDIK 197 (303)
Q Consensus 132 ~mkIgIIGlG~MG~~~La~al~----------r~~---e~l~e~Gv~v~~d~~eav~~ADIVILAVp-P~~v~~VL~eI~ 197 (303)
+|||+|||+|.||.. ++..+. +.. +.+.+.|+.+..++.++++++|+||+||| +.++++++.++.
T Consensus 30 ~~~I~iIG~G~mG~~-~a~~l~~~g~~V~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~DvVi~av~~~~~~~~v~~~~~ 108 (316)
T 2uyy_A 30 DKKIGFLGLGLMGSG-IVSNLLKMGHTVTVWNRTAEKCDLFIQEGARLGRTPAEVVSTCDITFACVSDPKAAKDLVLGPS 108 (316)
T ss_dssp SSCEEEECCSHHHHH-HHHHHHHTTCCEEEECSSGGGGHHHHHTTCEECSCHHHHHHHCSEEEECCSSHHHHHHHHHSTT
T ss_pred CCeEEEEcccHHHHH-HHHHHHhCCCEEEEEeCCHHHHHHHHHcCCEEcCCHHHHHhcCCEEEEeCCCHHHHHHHHcCch
Confidence 489999999999994 554421 222 23456788887888888899999999999 899999997653
Q ss_pred ---cccCCCCEEEEecCCCc--HHHHHhhCC-CCCceEE-EecCcHHhhhCCcE-EEEeCCCCCHHHHHHHHHHHHhcCC
Q psy6714 198 ---PVFNESNLLISVAGGVP--IKNMEQALP-KNSRIIR-AMPNTPALVRQGAS-VFVRGSSASDQDAQTVINLFKSVGT 269 (303)
Q Consensus 198 ---~~L~~g~IVVSiaaGV~--ie~L~~~l~-~~~~VVr-~mPn~p~~v~~G~t-il~~g~~~~~e~~e~V~~Lfs~iG~ 269 (303)
+.+.++++||++.++.. .+.+.+.++ .+..++. .+++.+...+.|.. +++.+ +++..+.+.++|+.+|.
T Consensus 109 ~~~~~l~~~~~vv~~s~~~~~~~~~l~~~~~~~~~~~v~~p~~g~~~~~~~g~~~~~~~g---~~~~~~~v~~ll~~~g~ 185 (316)
T 2uyy_A 109 GVLQGIRPGKCYVDMSTVDADTVTELAQVIVSRGGRFLEAPVSGNQQLSNDGMLVILAAG---DRGLYEDCSSCFQAMGK 185 (316)
T ss_dssp CGGGGCCTTCEEEECSCCCHHHHHHHHHHHHHTTCEEEECCEESCHHHHHHTCEEEEEEE---CHHHHHHTHHHHHHHEE
T ss_pred hHhhcCCCCCEEEECCCCCHHHHHHHHHHHHHcCCEEEEcCccCChhHHhhCCEEEEeCC---CHHHHHHHHHHHHHhcC
Confidence 66778899998766442 345555553 2234443 24555555666754 44444 57888999999999997
Q ss_pred cEEc-CCC-----CchhhhhhccchHHHHHHHHHhhh
Q psy6714 270 CEEV-PEY-----LLDGITGLSGSGPAYRYEVTSNEV 300 (303)
Q Consensus 270 ~v~v-dE~-----~~Da~tAlsGsgPAf~~~~ie~~~ 300 (303)
.+++ ++. ......++.+ .+++.+.|++.
T Consensus 186 ~~~~~~~~~~~~~~K~~~n~~~~---~~~~~~~Ea~~ 219 (316)
T 2uyy_A 186 TSFFLGEVGNAAKMMLIVNMVQG---SFMATIAEGLT 219 (316)
T ss_dssp EEEECSSTTHHHHHHHHHHHHHH---HHHHHHHHHHH
T ss_pred CEEEeCCCCHHHHHHHHHHHHHH---HHHHHHHHHHH
Confidence 6544 441 1223333333 36677777664
No 46
>1yb4_A Tartronic semialdehyde reductase; structural genomics, oxidoreductase, salmonella typhimurium LT2, PSI, protein ST initiative; 2.40A {Salmonella typhimurium}
Probab=99.38 E-value=1.2e-12 Score=119.59 Aligned_cols=142 Identities=18% Similarity=0.170 Sum_probs=95.8
Q ss_pred CCCcEEEEcCChhhHHHHHHHHhh---------cH---HHHhhCCCeEecChHHhhcCCCEEEEeeC-CccHHHHHH---
Q psy6714 131 NRSDKQIAGTTERGPGALIASLNI---------VS---KATGTMGAKITFDNKEVTLNSEVIILAVK-PHIVPVALN--- 194 (303)
Q Consensus 131 ~~mkIgIIGlG~MG~~~La~al~r---------~~---e~l~e~Gv~v~~d~~eav~~ADIVILAVp-P~~v~~VL~--- 194 (303)
+||||+|||+|.||.. ++..+.. .. +.+.+.|+....++.++++++|+||+||| +.++..++.
T Consensus 2 ~~m~i~iiG~G~~G~~-~a~~l~~~g~~V~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~D~vi~~vp~~~~~~~v~~~~~ 80 (295)
T 1yb4_A 2 NAMKLGFIGLGIMGSP-MAINLARAGHQLHVTTIGPVADELLSLGAVNVETARQVTEFADIIFIMVPDTPQVEDVLFGEH 80 (295)
T ss_dssp --CEEEECCCSTTHHH-HHHHHHHTTCEEEECCSSCCCHHHHTTTCBCCSSHHHHHHTCSEEEECCSSHHHHHHHHHSTT
T ss_pred CCCEEEEEccCHHHHH-HHHHHHhCCCEEEEEcCHHHHHHHHHcCCcccCCHHHHHhcCCEEEEECCCHHHHHHHHhCch
Confidence 4789999999999994 5544211 11 23445577777788888999999999996 445889997
Q ss_pred hhccccCCCCEEEEecCCCc--HHHHHhhCCCCCceEEEe--cCc--HHhhhCCc-EEEEeCCCCCHHHHHHHHHHHHhc
Q psy6714 195 DIKPVFNESNLLISVAGGVP--IKNMEQALPKNSRIIRAM--PNT--PALVRQGA-SVFVRGSSASDQDAQTVINLFKSV 267 (303)
Q Consensus 195 eI~~~L~~g~IVVSiaaGV~--ie~L~~~l~~~~~VVr~m--Pn~--p~~v~~G~-til~~g~~~~~e~~e~V~~Lfs~i 267 (303)
++.+.++++++||++.++.. .+.|.+.++. ..++++ |.. +.....|. ++++.+ +++..+.+.++|+.+
T Consensus 81 ~l~~~l~~~~~vv~~s~~~~~~~~~l~~~~~~--~g~~~~~~p~~~~~~~a~~g~~~~~~~~---~~~~~~~~~~ll~~~ 155 (295)
T 1yb4_A 81 GCAKTSLQGKTIVDMSSISPIETKRFAQRVNE--MGADYLDAPVSGGEIGAREGTLSIMVGG---EQKVFDRVKPLFDIL 155 (295)
T ss_dssp SSTTSCCTTEEEEECSCCCHHHHHHHHHHHHT--TTEEEEECCEESHHHHHHHTCEEEEEES---CHHHHHHHHHHHHHH
T ss_pred hHhhcCCCCCEEEECCCCCHHHHHHHHHHHHH--cCCeEEEccCCCCHHHHHcCCeEEEECC---CHHHHHHHHHHHHHh
Confidence 78888888999998887743 4566666653 233443 221 11122454 455544 688889999999999
Q ss_pred CCc-EEcCCCCc
Q psy6714 268 GTC-EEVPEYLL 278 (303)
Q Consensus 268 G~~-v~vdE~~~ 278 (303)
|.. +++++...
T Consensus 156 g~~~~~~~~~~~ 167 (295)
T 1yb4_A 156 GKNITLVGGNGD 167 (295)
T ss_dssp EEEEEEEESTTH
T ss_pred cCCEEEeCCCCH
Confidence 975 55555333
No 47
>2zyd_A 6-phosphogluconate dehydrogenase, decarboxylating; NADP, pentose phosphate pathway, oxidoreductase, 6-phosphogl dehydrogenase; HET: GLO; 1.50A {Escherichia coli} PDB: 2zya_A* 3fwn_A* 2zyg_A 2w8z_A* 2w90_A*
Probab=99.37 E-value=3.3e-12 Score=126.85 Aligned_cols=134 Identities=15% Similarity=0.199 Sum_probs=98.1
Q ss_pred CCcEEEEcCChhhHHHHHHHH----------hhcHHH---HhhC----CCeEecChHHhhcC---CCEEEEeeCC-ccHH
Q psy6714 132 RSDKQIAGTTERGPGALIASL----------NIVSKA---TGTM----GAKITFDNKEVTLN---SEVIILAVKP-HIVP 190 (303)
Q Consensus 132 ~mkIgIIGlG~MG~~~La~al----------~r~~e~---l~e~----Gv~v~~d~~eav~~---ADIVILAVpP-~~v~ 190 (303)
+|+|||||+|.||.+ |+..+ ++..++ +.+. |+..+.++.++++. +|+||+|||+ +.++
T Consensus 15 ~~~IgvIGlG~MG~~-lA~~La~~G~~V~v~~r~~~~~~~l~~~~~~~gi~~~~s~~e~v~~l~~aDvVil~Vp~~~~v~ 93 (480)
T 2zyd_A 15 KQQIGVVGMAVMGRN-LALNIESRGYTVSIFNRSREKTEEVIAENPGKKLVPYYTVKEFVESLETPRRILLMVKAGAGTD 93 (480)
T ss_dssp CBSEEEECCSHHHHH-HHHHHHTTTCCEEEECSSHHHHHHHHHHSTTSCEEECSSHHHHHHTBCSSCEEEECSCSSSHHH
T ss_pred CCeEEEEccHHHHHH-HHHHHHhCCCeEEEEeCCHHHHHHHHhhCCCCCeEEeCCHHHHHhCCCCCCEEEEECCCHHHHH
Confidence 578999999999994 55442 233332 3332 78888888888887 9999999998 6899
Q ss_pred HHHHhhccccCCCCEEEEecCCCcH--HHHHhhCCC-CCceEEEecCc--HHhhhCCcEEEEeCCCCCHHHHHHHHHHHH
Q psy6714 191 VALNDIKPVFNESNLLISVAGGVPI--KNMEQALPK-NSRIIRAMPNT--PALVRQGASVFVRGSSASDQDAQTVINLFK 265 (303)
Q Consensus 191 ~VL~eI~~~L~~g~IVVSiaaGV~i--e~L~~~l~~-~~~VVr~mPn~--p~~v~~G~til~~g~~~~~e~~e~V~~Lfs 265 (303)
++++++.+.++++++||++.+|... ..+.+.+.. +..++ .+|.. +.....|.++++.+ +++..+.++++|+
T Consensus 94 ~vl~~l~~~l~~g~iIId~s~g~~~~t~~l~~~l~~~g~~~v-~~pv~gg~~~a~~g~~i~~gg---~~~~~~~v~~ll~ 169 (480)
T 2zyd_A 94 AAIDSLKPYLDKGDIIIDGGNTFFQDTIRRNRELSAEGFNFI-GTGVSGGEEGALKGPSIMPGG---QKEAYELVAPILT 169 (480)
T ss_dssp HHHHHHGGGCCTTCEEEECSCCCHHHHHHHHHHHHHTTCEEE-EEEEESHHHHHHHCCEEEEES---CHHHHHHHHHHHH
T ss_pred HHHHHHHhhcCCCCEEEECCCCCHHHHHHHHHHHHHCCCCee-CCccccCHhHHhcCCeEEecC---CHHHHHHHHHHHH
Confidence 9999999999889999999988854 445555532 23444 23443 33345566666655 6889999999999
Q ss_pred hcCCc
Q psy6714 266 SVGTC 270 (303)
Q Consensus 266 ~iG~~ 270 (303)
.+|..
T Consensus 170 ~~g~~ 174 (480)
T 2zyd_A 170 KIAAV 174 (480)
T ss_dssp HHSCB
T ss_pred HHhcc
Confidence 99975
No 48
>1i36_A Conserved hypothetical protein MTH1747; NADP binding domain, protein NADP complex, structural genomics, PSI; HET: NAP; 2.00A {Methanothermobacterthermautotrophicus} SCOP: a.100.1.8 c.2.1.6
Probab=99.37 E-value=5.4e-12 Score=113.80 Aligned_cols=153 Identities=13% Similarity=0.131 Sum_probs=102.0
Q ss_pred CcEEEEcCChhhHHHHHHHH----------hh--cHH---HHhhCCCeEecChHHhhcCCCEEEEeeCCccHHHHHHhhc
Q psy6714 133 SDKQIAGTTERGPGALIASL----------NI--VSK---ATGTMGAKITFDNKEVTLNSEVIILAVKPHIVPVALNDIK 197 (303)
Q Consensus 133 mkIgIIGlG~MG~~~La~al----------~r--~~e---~l~e~Gv~v~~d~~eav~~ADIVILAVpP~~v~~VL~eI~ 197 (303)
|||+|||+|.||.+ ++..+ ++ ..+ .+.+.|+. .++.++++++|+||+|||++...+.+.++.
T Consensus 1 M~I~iIG~G~mG~~-la~~l~~~g~~V~~~~~~~~~~~~~~~~~~g~~--~~~~~~~~~aDvvi~~v~~~~~~~~~~~~~ 77 (264)
T 1i36_A 1 LRVGFIGFGEVAQT-LASRLRSRGVEVVTSLEGRSPSTIERARTVGVT--ETSEEDVYSCPVVISAVTPGVALGAARRAG 77 (264)
T ss_dssp CEEEEESCSHHHHH-HHHHHHHTTCEEEECCTTCCHHHHHHHHHHTCE--ECCHHHHHTSSEEEECSCGGGHHHHHHHHH
T ss_pred CeEEEEechHHHHH-HHHHHHHCCCeEEEeCCccCHHHHHHHHHCCCc--CCHHHHHhcCCEEEEECCCHHHHHHHHHHH
Confidence 78999999999994 55432 12 222 33445776 677888899999999999987666677787
Q ss_pred cccCCCCEEEEecCCCcH---HHHHhhCCCCCceEEE-ecCcHHhhhCCcEEEEeCCCCCHHHHHHHHHHHHhcCCc-EE
Q psy6714 198 PVFNESNLLISVAGGVPI---KNMEQALPKNSRIIRA-MPNTPALVRQGASVFVRGSSASDQDAQTVINLFKSVGTC-EE 272 (303)
Q Consensus 198 ~~L~~g~IVVSiaaGV~i---e~L~~~l~~~~~VVr~-mPn~p~~v~~G~til~~g~~~~~e~~e~V~~Lfs~iG~~-v~ 272 (303)
+.+++ +||++ +++.. +.+.+.++... ++.. +-..+.....|..+++.++. + +.+++ |+.+|.. ++
T Consensus 78 ~~~~~--~vi~~-s~~~~~~~~~l~~~~~~~g-~~~~~v~~~~~~~~~g~~~~~~g~~---~--~~~~~-l~~~g~~~~~ 147 (264)
T 1i36_A 78 RHVRG--IYVDI-NNISPETVRMASSLIEKGG-FVDAAIMGSVRRKGADIRIIASGRD---A--EEFMK-LNRYGLNIEV 147 (264)
T ss_dssp TTCCS--EEEEC-SCCCHHHHHHHHHHCSSSE-EEEEEECSCHHHHGGGCEEEEESTT---H--HHHHG-GGGGTCEEEE
T ss_pred HhcCc--EEEEc-cCCCHHHHHHHHHHHhhCC-eeeeeeeCCccccccCCeEEecCCc---H--HHhhh-HHHcCCeeEE
Confidence 77754 77776 45543 46777776421 2221 12234444556665555532 2 77888 9999985 56
Q ss_pred cCCCCchhhhhhccchHHHHHHHHHhh
Q psy6714 273 VPEYLLDGITGLSGSGPAYRYEVTSNE 299 (303)
Q Consensus 273 vdE~~~Da~tAlsGsgPAf~~~~ie~~ 299 (303)
++|+ +....++-.+.++|++.++..+
T Consensus 148 ~~~~-~g~~~~~kl~~n~~~~~~~~~~ 173 (264)
T 1i36_A 148 RGRE-PGDASAIKMLRSSYTKGVSALL 173 (264)
T ss_dssp CSSS-TTHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCC-cCHHHHHHHHHHHHHHHHHHHH
Confidence 6654 6777777788898876665544
No 49
>3ghy_A Ketopantoate reductase protein; oxidoreductase, NAD-binding domain, PSI-2, NYSGXRC, structur genomics, protein structure initiative; 2.00A {Ralstonia solanacearum}
Probab=99.37 E-value=4.2e-12 Score=119.38 Aligned_cols=156 Identities=21% Similarity=0.292 Sum_probs=104.2
Q ss_pred CCcEEEEcCChhhHHHHHHHHh----------h--cHHHHhhCCCeE-------------ecChHHhhcCCCEEEEeeCC
Q psy6714 132 RSDKQIAGTTERGPGALIASLN----------I--VSKATGTMGAKI-------------TFDNKEVTLNSEVIILAVKP 186 (303)
Q Consensus 132 ~mkIgIIGlG~MG~~~La~al~----------r--~~e~l~e~Gv~v-------------~~d~~eav~~ADIVILAVpP 186 (303)
+|||+|||+|.||+ .++..+. + ..+.+.+.|+.+ +.+..+ +.++|+||+|||+
T Consensus 3 ~mkI~IiGaG~~G~-~~a~~L~~~g~~V~~~~r~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~-~~~~D~Vilavk~ 80 (335)
T 3ghy_A 3 LTRICIVGAGAVGG-YLGARLALAGEAINVLARGATLQALQTAGLRLTEDGATHTLPVRATHDAAA-LGEQDVVIVAVKA 80 (335)
T ss_dssp CCCEEEESCCHHHH-HHHHHHHHTTCCEEEECCHHHHHHHHHTCEEEEETTEEEEECCEEESCHHH-HCCCSEEEECCCH
T ss_pred CCEEEEECcCHHHH-HHHHHHHHCCCEEEEEEChHHHHHHHHCCCEEecCCCeEEEeeeEECCHHH-cCCCCEEEEeCCc
Confidence 58999999999999 5654432 1 123344556543 235544 6899999999999
Q ss_pred ccHHHHHHhhccccCCCCEEEEecCCCc--------------------HHHHHhhCCCCCceEEEe---------cCcHH
Q psy6714 187 HIVPVALNDIKPVFNESNLLISVAGGVP--------------------IKNMEQALPKNSRIIRAM---------PNTPA 237 (303)
Q Consensus 187 ~~v~~VL~eI~~~L~~g~IVVSiaaGV~--------------------ie~L~~~l~~~~~VVr~m---------Pn~p~ 237 (303)
+++.++++++.++++++++||++++|+. .+.+.+.++. ..++..+ |+...
T Consensus 81 ~~~~~~~~~l~~~l~~~~~iv~~~nGi~~~~~~~~g~~~~~~~~~~~~~~~l~~~~~~-~~v~~gv~~~~a~~~~pg~v~ 159 (335)
T 3ghy_A 81 PALESVAAGIAPLIGPGTCVVVAMNGVPWWFFDRPGPLQGQRLQAVDPHGRIAQAIPT-RHVLGCVVHLTCATVSPGHIR 159 (335)
T ss_dssp HHHHHHHGGGSSSCCTTCEEEECCSSSCTTTTCSSSTTTTCCCTTTCTTSHHHHHSCG-GGEEEEEECCCEEESSTTEEE
T ss_pred hhHHHHHHHHHhhCCCCCEEEEECCCCccccccccccccccccccCCcHHHHHHhcCc-ccEEEEEEEEEEEEcCCcEEE
Confidence 9999999999999999999999999963 2367777874 3554333 33322
Q ss_pred hhhCCcEEEEeCCCCCHHHHHHHHHHHHhcCCcEEcCCCC-------------chhhhhhccchHH
Q psy6714 238 LVRQGASVFVRGSSASDQDAQTVINLFKSVGTCEEVPEYL-------------LDGITGLSGSGPA 290 (303)
Q Consensus 238 ~v~~G~til~~g~~~~~e~~e~V~~Lfs~iG~~v~vdE~~-------------~Da~tAlsGsgPA 290 (303)
..+.+.+.+-.....+.+..+.+.++|+..|..++++++. ++.++++.++.-+
T Consensus 160 ~~~~g~~~iG~~~~~~~~~~~~l~~~l~~~g~~~~~~~di~~~~w~Kl~~na~~N~l~al~~~~~g 225 (335)
T 3ghy_A 160 HGNGRRLILGEPAGGASPRLASIAALFGRAGLQAECSEAIQRDIWFKLWGNMTMNPVSVLTGATCD 225 (335)
T ss_dssp ECSCCEEEEECTTCSCCHHHHHHHHHHHHTTCEEEECSCHHHHHHHHHHTTTTHHHHHHHHCCCHH
T ss_pred ECCCCeEEEecCCCCcCHHHHHHHHHHHhCCCCcEeCchHHHHHHHHHHHHhhhhHHHHHhCCChH
Confidence 2233332222212234567788999999999887776543 3555666665433
No 50
>3hwr_A 2-dehydropantoate 2-reductase; YP_299159.1, PANE/APBA family ketopantoate reductase, struct genomics, joint center for structural genomics; HET: NDP BCN; 2.15A {Ralstonia eutropha}
Probab=99.36 E-value=2.7e-12 Score=120.17 Aligned_cols=150 Identities=17% Similarity=0.231 Sum_probs=105.5
Q ss_pred CCcEEEEcCChhhHHHHHHHHh---------hcH---HHHhhCCCe-------------EecChHHhhcCCCEEEEeeCC
Q psy6714 132 RSDKQIAGTTERGPGALIASLN---------IVS---KATGTMGAK-------------ITFDNKEVTLNSEVIILAVKP 186 (303)
Q Consensus 132 ~mkIgIIGlG~MG~~~La~al~---------r~~---e~l~e~Gv~-------------v~~d~~eav~~ADIVILAVpP 186 (303)
+|||+|||+|.||+ .++..+. ... +.+.+.|+. .+.+. +.++++|+||+|||+
T Consensus 19 ~~kI~IiGaGa~G~-~~a~~L~~~G~~V~l~~~~~~~~~i~~~g~~~~~~~~~~~~~~~~~~~~-~~~~~~D~vilavk~ 96 (318)
T 3hwr_A 19 GMKVAIMGAGAVGC-YYGGMLARAGHEVILIARPQHVQAIEATGLRLETQSFDEQVKVSASSDP-SAVQGADLVLFCVKS 96 (318)
T ss_dssp -CEEEEESCSHHHH-HHHHHHHHTTCEEEEECCHHHHHHHHHHCEEEECSSCEEEECCEEESCG-GGGTTCSEEEECCCG
T ss_pred CCcEEEECcCHHHH-HHHHHHHHCCCeEEEEEcHhHHHHHHhCCeEEEcCCCcEEEeeeeeCCH-HHcCCCCEEEEEccc
Confidence 78999999999999 4655432 112 233344432 23444 446899999999999
Q ss_pred ccHHHHHHhhccccCCCCEEEEecCCCcH-HHHHhhCCCCCceE---------EEecCcHHhhhCCcEEEEeCCCCCHHH
Q psy6714 187 HIVPVALNDIKPVFNESNLLISVAGGVPI-KNMEQALPKNSRII---------RAMPNTPALVRQGASVFVRGSSASDQD 256 (303)
Q Consensus 187 ~~v~~VL~eI~~~L~~g~IVVSiaaGV~i-e~L~~~l~~~~~VV---------r~mPn~p~~v~~G~til~~g~~~~~e~ 256 (303)
+++.++++++.++++++++||++++|+.. +.+.+.++ ..++ ...|++...++.|.+. .+. .+.
T Consensus 97 ~~~~~~l~~l~~~l~~~~~iv~~~nGi~~~~~l~~~~~--~~vl~g~~~~~a~~~gP~~~~~~~~g~~~--ig~---~~~ 169 (318)
T 3hwr_A 97 TDTQSAALAMKPALAKSALVLSLQNGVENADTLRSLLE--QEVAAAVVYVATEMAGPGHVRHHGRGELV--IEP---TSH 169 (318)
T ss_dssp GGHHHHHHHHTTTSCTTCEEEEECSSSSHHHHHHHHCC--SEEEEEEEEEEEEEEETTEEEEEEEEEEE--ECC---CTT
T ss_pred ccHHHHHHHHHHhcCCCCEEEEeCCCCCcHHHHHHHcC--CcEEEEEEEEeEEEcCCeEEEEcCCceEE--EcC---CHH
Confidence 99999999999999999999999999998 67888886 2232 3346666555555433 343 234
Q ss_pred HHHHHHHHHhcCCcEEcCCCC-------------chhhhhhccchHH
Q psy6714 257 AQTVINLFKSVGTCEEVPEYL-------------LDGITGLSGSGPA 290 (303)
Q Consensus 257 ~e~V~~Lfs~iG~~v~vdE~~-------------~Da~tAlsGsgPA 290 (303)
.+.+.++|+..|..++++++. ++.++++.+|.-+
T Consensus 170 ~~~l~~~l~~~~~~~~~~~Di~~~~w~Kl~~N~~~n~l~al~~~~~g 216 (318)
T 3hwr_A 170 GANLAAIFAAAGVPVETSDNVRGALWAKLILNCAYNALSAITQLPYG 216 (318)
T ss_dssp THHHHHHHHHTTCCEEECSCHHHHHHHHHHHHHHHHHHHHHHTCCHH
T ss_pred HHHHHHHHHhCCCCcEechHHHHHHHHHHHHHhhhhHHHHHHCCCHH
Confidence 578999999999988877653 5566777766544
No 51
>2vns_A Metalloreductase steap3; metal-binding, transmembrane, rossmann fold, transport, cell cycle, transferrin, flavoprotein, alternative splicing; HET: CIT; 2.0A {Homo sapiens} PDB: 2vq3_A*
Probab=99.35 E-value=8.1e-12 Score=110.70 Aligned_cols=156 Identities=16% Similarity=0.195 Sum_probs=100.0
Q ss_pred CCCcEEEEcCChhhHHHHHHHHh----------hcHH---HHhhCCCeEecChHHhhcCCCEEEEeeCCccHHHHHHhhc
Q psy6714 131 NRSDKQIAGTTERGPGALIASLN----------IVSK---ATGTMGAKITFDNKEVTLNSEVIILAVKPHIVPVALNDIK 197 (303)
Q Consensus 131 ~~mkIgIIGlG~MG~~~La~al~----------r~~e---~l~e~Gv~v~~d~~eav~~ADIVILAVpP~~v~~VL~eI~ 197 (303)
.+|||+|||+|.||. .++..+. +..+ .+.+.|+... +..++++++|+||+|+|++.+.++++ +.
T Consensus 27 ~~~~I~iiG~G~~G~-~la~~l~~~g~~V~~~~r~~~~~~~~~~~g~~~~-~~~~~~~~~DvVi~av~~~~~~~v~~-l~ 103 (215)
T 2vns_A 27 EAPKVGILGSGDFAR-SLATRLVGSGFKVVVGSRNPKRTARLFPSAAQVT-FQEEAVSSPEVIFVAVFREHYSSLCS-LS 103 (215)
T ss_dssp --CCEEEECCSHHHH-HHHHHHHHTTCCEEEEESSHHHHHHHSBTTSEEE-EHHHHTTSCSEEEECSCGGGSGGGGG-GH
T ss_pred CCCEEEEEccCHHHH-HHHHHHHHCCCEEEEEeCCHHHHHHHHHcCCcee-cHHHHHhCCCEEEECCChHHHHHHHH-HH
Confidence 368999999999999 4554431 2222 2334577765 77788899999999999988888775 66
Q ss_pred cccCCCCEEEEecCCCcHHHHH----------hhCCCCCceEEEecCcHHh-hhC----Cc-EEEEeCCCCCHHHHHHHH
Q psy6714 198 PVFNESNLLISVAGGVPIKNME----------QALPKNSRIIRAMPNTPAL-VRQ----GA-SVFVRGSSASDQDAQTVI 261 (303)
Q Consensus 198 ~~L~~g~IVVSiaaGV~ie~L~----------~~l~~~~~VVr~mPn~p~~-v~~----G~-til~~g~~~~~e~~e~V~ 261 (303)
+.+ ++++||++++|++.+.+. +.++ +.++++.|...... ... +. .++..+ .+++.++.++
T Consensus 104 ~~~-~~~~vv~~s~g~~~~~l~~~~~~~~~l~~~l~-~~~vv~~~n~~~~~~~~~~~~~g~~~~~~~g--~~~~~~~~v~ 179 (215)
T 2vns_A 104 DQL-AGKILVDVSNPTEQEHLQHRESNAEYLASLFP-TCTVVKAFNVISAWTLQAGPRDGNRQVPICG--DQPEAKRAVS 179 (215)
T ss_dssp HHH-TTCEEEECCCCCHHHHHHCSSCHHHHHHHHCT-TSEEEEECTTBCHHHHHTCSCSSCCEEEEEE--SCHHHHHHHH
T ss_pred Hhc-CCCEEEEeCCCcccccccccccHHHHHHHHCC-CCeEEeccccccHhHhcccccCCceeEEEec--CCHHHHHHHH
Confidence 666 788999999999876553 6676 36788887332221 112 22 233333 2788999999
Q ss_pred HHHHhcCCc-EEcCCCCchhhhhhccchHHHHHHHH
Q psy6714 262 NLFKSVGTC-EEVPEYLLDGITGLSGSGPAYRYEVT 296 (303)
Q Consensus 262 ~Lfs~iG~~-v~vdE~~~Da~tAlsGsgPAf~~~~i 296 (303)
++|+.+|.. +.+.+ ......+ -..++|+|.++
T Consensus 180 ~ll~~~G~~~~~~g~--~~~~~~~-e~~~~~~~~~~ 212 (215)
T 2vns_A 180 EMALAMGFMPVDMGS--LASAWEV-EAMPLRLLPAW 212 (215)
T ss_dssp HHHHHTTCEEEECCS--GGGHHHH-HHSCCBC----
T ss_pred HHHHHcCCceEeecc--hhhhhHh-hhhhhhheecc
Confidence 999999985 45543 2222222 23445555443
No 52
>2iz1_A 6-phosphogluconate dehydrogenase, decarboxylating; pentose shunt, oxidoreductase, gluconate utilization; HET: ATR RES P33; 2.30A {Lactococcus lactis} PDB: 2iz0_A* 2iyp_A* 2iyo_A*
Probab=99.34 E-value=9.2e-12 Score=123.14 Aligned_cols=135 Identities=14% Similarity=0.161 Sum_probs=97.8
Q ss_pred CCcEEEEcCChhhHHHHHHHH----------hhcHHH---HhhC----CCeEecChHHhhcC---CCEEEEeeCC-ccHH
Q psy6714 132 RSDKQIAGTTERGPGALIASL----------NIVSKA---TGTM----GAKITFDNKEVTLN---SEVIILAVKP-HIVP 190 (303)
Q Consensus 132 ~mkIgIIGlG~MG~~~La~al----------~r~~e~---l~e~----Gv~v~~d~~eav~~---ADIVILAVpP-~~v~ 190 (303)
+|||||||+|.||.. ++..+ ++..++ +.+. |+..+.++.++++. +|+||+|||+ +.+.
T Consensus 5 ~~~IgvIG~G~mG~~-lA~~L~~~G~~V~v~dr~~~~~~~l~~~~~~~gi~~~~s~~e~v~~l~~aDvVilavp~~~~v~ 83 (474)
T 2iz1_A 5 QANFGVVGMAVMGKN-LALNVESRGYTVAIYNRTTSKTEEVFKEHQDKNLVFTKTLEEFVGSLEKPRRIMLMVQAGAATD 83 (474)
T ss_dssp TBSEEEECCSHHHHH-HHHHHHHTTCCEEEECSSHHHHHHHHHHTTTSCEEECSSHHHHHHTBCSSCEEEECCCTTHHHH
T ss_pred CCcEEEEeeHHHHHH-HHHHHHhCCCEEEEEcCCHHHHHHHHHhCcCCCeEEeCCHHHHHhhccCCCEEEEEccCchHHH
Confidence 478999999999994 55442 222332 3332 77777888888876 9999999998 5899
Q ss_pred HHHHhhccccCCCCEEEEecCCCcH--HHHHhhCCC-CCceEEEecCc--HHhhhCCcEEEEeCCCCCHHHHHHHHHHHH
Q psy6714 191 VALNDIKPVFNESNLLISVAGGVPI--KNMEQALPK-NSRIIRAMPNT--PALVRQGASVFVRGSSASDQDAQTVINLFK 265 (303)
Q Consensus 191 ~VL~eI~~~L~~g~IVVSiaaGV~i--e~L~~~l~~-~~~VVr~mPn~--p~~v~~G~til~~g~~~~~e~~e~V~~Lfs 265 (303)
++++++.+.++++++||++.++... ..+.+.+.. +..++ .+|.. +.....|.++++.+ +++..+.++++|+
T Consensus 84 ~vl~~l~~~l~~g~iiId~s~~~~~~~~~l~~~l~~~g~~~v-~~pv~gg~~~a~~g~~i~~gg---~~~~~~~v~~ll~ 159 (474)
T 2iz1_A 84 ATIKSLLPLLDIGDILIDGGNTHFPDTMRRNAELADSGINFI-GTGVSGGEKGALLGPSMMPGG---QKEAYDLVAPIFE 159 (474)
T ss_dssp HHHHHHGGGCCTTCEEEECSCCCHHHHHHHHHHTTTSSCEEE-EEEECSHHHHHHHCCCEEEEE---CHHHHHHHHHHHH
T ss_pred HHHHHHHhhCCCCCEEEECCCCCHHHHHHHHHHHHHCCCeEE-CCCCCCChhhhccCCeEEecC---CHHHHHHHHHHHH
Confidence 9999999999889999998888743 556666653 23333 24543 33344566665554 6889999999999
Q ss_pred hcCCcE
Q psy6714 266 SVGTCE 271 (303)
Q Consensus 266 ~iG~~v 271 (303)
.+|..+
T Consensus 160 ~~g~~~ 165 (474)
T 2iz1_A 160 QIAAKA 165 (474)
T ss_dssp HHSCBC
T ss_pred HHhccc
Confidence 999864
No 53
>3mog_A Probable 3-hydroxybutyryl-COA dehydrogenase; structural genomics, PSI, protein structure initiative, NYSG oxidoreductase; 2.20A {Escherichia coli}
Probab=99.33 E-value=1.2e-11 Score=123.14 Aligned_cols=108 Identities=15% Similarity=0.145 Sum_probs=87.7
Q ss_pred eEecChHHhhcCCCEEEEeeCCc--cHHHHHHhhccccCCCCEEEEecCCCcHHHHHhhCCCCCceEEEecCcHHhhhCC
Q psy6714 165 KITFDNKEVTLNSEVIILAVKPH--IVPVALNDIKPVFNESNLLISVAGGVPIKNMEQALPKNSRIIRAMPNTPALVRQG 242 (303)
Q Consensus 165 ~v~~d~~eav~~ADIVILAVpP~--~v~~VL~eI~~~L~~g~IVVSiaaGV~ie~L~~~l~~~~~VVr~mPn~p~~v~~G 242 (303)
..+.+. +.+++||+||+||+++ ...+++.++.++++++++|+|.++++++..|.+.+.....++..|+..|..+. .
T Consensus 74 ~~~~~~-~~~~~aDlVIeAVpe~~~vk~~v~~~l~~~~~~~~IlasntSti~i~~ia~~~~~p~~~ig~hf~~Pa~v~-~ 151 (483)
T 3mog_A 74 IPVTDI-HALAAADLVIEAASERLEVKKALFAQLAEVCPPQTLLTTNTSSISITAIAAEIKNPERVAGLHFFNPAPVM-K 151 (483)
T ss_dssp EEECCG-GGGGGCSEEEECCCCCHHHHHHHHHHHHHHSCTTCEEEECCSSSCHHHHTTTSSSGGGEEEEEECSSTTTC-C
T ss_pred eEeCCH-HHhcCCCEEEEcCCCcHHHHHHHHHHHHHhhccCcEEEecCCCCCHHHHHHHccCccceEEeeecChhhhC-C
Confidence 455565 4688999999999876 34688889988888999988999999999988877644579999998876654 3
Q ss_pred cEEEEeCCCCCHHHHHHHHHHHHhcCCc-EEcC
Q psy6714 243 ASVFVRGSSASDQDAQTVINLFKSVGTC-EEVP 274 (303)
Q Consensus 243 ~til~~g~~~~~e~~e~V~~Lfs~iG~~-v~vd 274 (303)
.+.++.+...+++.++.+..+++.+|+. +.+.
T Consensus 152 Lvevv~g~~Ts~e~~~~~~~l~~~lGk~~v~v~ 184 (483)
T 3mog_A 152 LVEVVSGLATAAEVVEQLCELTLSWGKQPVRCH 184 (483)
T ss_dssp EEEEEECSSCCHHHHHHHHHHHHHTTCEEEEEE
T ss_pred eEEEecCCCCCHHHHHHHHHHHHHhCCEEEEEe
Confidence 5667788888999999999999999985 5553
No 54
>4e21_A 6-phosphogluconate dehydrogenase (decarboxylating; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.30A {Geobacter metallireducens}
Probab=99.32 E-value=3e-11 Score=115.81 Aligned_cols=132 Identities=13% Similarity=0.201 Sum_probs=94.7
Q ss_pred CCcEEEEcCChhhHHHHHHHH----------hhcHH---HHhhCCCeEecChHHhhcCC---CEEEEeeCCccHHHHHHh
Q psy6714 132 RSDKQIAGTTERGPGALIASL----------NIVSK---ATGTMGAKITFDNKEVTLNS---EVIILAVKPHIVPVALND 195 (303)
Q Consensus 132 ~mkIgIIGlG~MG~~~La~al----------~r~~e---~l~e~Gv~v~~d~~eav~~A---DIVILAVpP~~v~~VL~e 195 (303)
+|||||||+|.||.+ ++..+ ++..+ .+.+.|+..+.++.++++.+ |+||+|||+..+.+++.+
T Consensus 22 ~mkIgiIGlG~mG~~-~A~~L~~~G~~V~v~dr~~~~~~~l~~~g~~~~~s~~e~~~~a~~~DvVi~~vp~~~v~~vl~~ 100 (358)
T 4e21_A 22 SMQIGMIGLGRMGAD-MVRRLRKGGHECVVYDLNVNAVQALEREGIAGARSIEEFCAKLVKPRVVWLMVPAAVVDSMLQR 100 (358)
T ss_dssp CCEEEEECCSHHHHH-HHHHHHHTTCEEEEECSCHHHHHHHHTTTCBCCSSHHHHHHHSCSSCEEEECSCGGGHHHHHHH
T ss_pred CCEEEEECchHHHHH-HHHHHHhCCCEEEEEeCCHHHHHHHHHCCCEEeCCHHHHHhcCCCCCEEEEeCCHHHHHHHHHH
Confidence 589999999999995 55442 23333 34567888888999999888 999999998899999999
Q ss_pred hccccCCCCEEEEecCCCcH--HHHHhhCC-CCCceEEEecC--cHHhhhCCcEEEEeCCCCCHHHHHHHHHHHHhcC
Q psy6714 196 IKPVFNESNLLISVAGGVPI--KNMEQALP-KNSRIIRAMPN--TPALVRQGASVFVRGSSASDQDAQTVINLFKSVG 268 (303)
Q Consensus 196 I~~~L~~g~IVVSiaaGV~i--e~L~~~l~-~~~~VVr~mPn--~p~~v~~G~til~~g~~~~~e~~e~V~~Lfs~iG 268 (303)
+.+.++++++||++.++... ..+.+.+. .+..++.+ |. .+.....|.++++.+ +++.++.++.+|+.+|
T Consensus 101 l~~~l~~g~iiId~st~~~~~~~~~~~~l~~~g~~~vda-pVsGg~~~a~~G~~im~GG---~~~a~~~~~~ll~~lg 174 (358)
T 4e21_A 101 MTPLLAANDIVIDGGNSHYQDDIRRADQMRAQGITYVDV-GTSGGIFGLERGYCLMIGG---EKQAVERLDPVFRTLA 174 (358)
T ss_dssp HGGGCCTTCEEEECSSCCHHHHHHHHHHHHTTTCEEEEE-EEECGGGHHHHCCEEEEES---CHHHHHHTHHHHHHHS
T ss_pred HHhhCCCCCEEEeCCCCChHHHHHHHHHHHHCCCEEEeC-CCCCCHHHHhcCCeeeecC---CHHHHHHHHHHHHHhc
Confidence 99999899999977655432 33444342 23334432 21 122223455666666 6889999999999999
No 55
>3k6j_A Protein F01G10.3, confirmed by transcript evidenc; rossmann fold, oxidoreductase; 2.20A {Caenorhabditis elegans}
Probab=99.31 E-value=6.6e-11 Score=117.24 Aligned_cols=141 Identities=16% Similarity=0.167 Sum_probs=104.8
Q ss_pred CCcEEEEcCChhhHHHHHHHH----------hhcHH-----------HHhhCC-------------CeEecChHHhhcCC
Q psy6714 132 RSDKQIAGTTERGPGALIASL----------NIVSK-----------ATGTMG-------------AKITFDNKEVTLNS 177 (303)
Q Consensus 132 ~mkIgIIGlG~MG~~~La~al----------~r~~e-----------~l~e~G-------------v~v~~d~~eav~~A 177 (303)
++||+|||+|.||.+ ++..+ ++..+ ++.+.| +..+.+. +.+++|
T Consensus 54 i~kVaVIGaG~MG~~-IA~~la~aG~~V~l~D~~~e~a~~~i~~~l~~~~~~G~l~~~~~~~~~~~i~~t~dl-~al~~a 131 (460)
T 3k6j_A 54 VNSVAIIGGGTMGKA-MAICFGLAGIETFLVVRNEQRCKQELEVMYAREKSFKRLNDKRIEKINANLKITSDF-HKLSNC 131 (460)
T ss_dssp CCEEEEECCSHHHHH-HHHHHHHTTCEEEEECSCHHHHHHHHHHHHHHHHHTTSCCHHHHHHHHTTEEEESCG-GGCTTC
T ss_pred CCEEEEECCCHHHHH-HHHHHHHCCCeEEEEECcHHHHHHHHHHHHHHHHHcCCCCHHHHHHHhcceEEeCCH-HHHccC
Confidence 678999999999995 44331 11111 222333 2455666 468899
Q ss_pred CEEEEeeCCc--cHHHHHHhhccccCCCCEEEEecCCCcHHHHHhhCCCCCceEEEecCcHHhhhCCcEEEEeCCCCCHH
Q psy6714 178 EVIILAVKPH--IVPVALNDIKPVFNESNLLISVAGGVPIKNMEQALPKNSRIIRAMPNTPALVRQGASVFVRGSSASDQ 255 (303)
Q Consensus 178 DIVILAVpP~--~v~~VL~eI~~~L~~g~IVVSiaaGV~ie~L~~~l~~~~~VVr~mPn~p~~v~~G~til~~g~~~~~e 255 (303)
|+||+||+.+ ...+++.+|.+.+++++||+|.++++++..|.+.++...+++..|+.-|..... ..-++.+...+++
T Consensus 132 DlVIeAVpe~~~vk~~v~~~l~~~~~~~aIlasnTSsl~i~~ia~~~~~p~r~iG~HffnPv~~m~-LvEIv~g~~Ts~e 210 (460)
T 3k6j_A 132 DLIVESVIEDMKLKKELFANLENICKSTCIFGTNTSSLDLNEISSVLRDPSNLVGIHFFNPANVIR-LVEIIYGSHTSSQ 210 (460)
T ss_dssp SEEEECCCSCHHHHHHHHHHHHTTSCTTCEEEECCSSSCHHHHHTTSSSGGGEEEEECCSSTTTCC-EEEEECCSSCCHH
T ss_pred CEEEEcCCCCHHHHHHHHHHHHhhCCCCCEEEecCCChhHHHHHHhccCCcceEEEEecchhhhCC-EEEEEeCCCCCHH
Confidence 9999999854 345778889888989999999999999999988876434789999888765433 3456677778999
Q ss_pred HHHHHHHHHHhcCCc-EEcCC
Q psy6714 256 DAQTVINLFKSVGTC-EEVPE 275 (303)
Q Consensus 256 ~~e~V~~Lfs~iG~~-v~vdE 275 (303)
.++.+.++++.+|+. +.+.+
T Consensus 211 ~~~~~~~l~~~lGk~~v~v~d 231 (460)
T 3k6j_A 211 AIATAFQACESIKKLPVLVGN 231 (460)
T ss_dssp HHHHHHHHHHHTTCEEEEESS
T ss_pred HHHHHHHHHHHhCCEEEEEec
Confidence 999999999999985 55543
No 56
>4gbj_A 6-phosphogluconate dehydrogenase NAD-binding; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; 2.05A {Dyadobacter fermentans}
Probab=99.30 E-value=6.9e-12 Score=117.02 Aligned_cols=139 Identities=9% Similarity=0.136 Sum_probs=90.0
Q ss_pred CCcEEEEcCChhhHHHHHHH---------HhhcHHH---HhhCCCeEecChHHhhcCCCEEEEeeCC-ccHHHHH-Hhhc
Q psy6714 132 RSDKQIAGTTERGPGALIAS---------LNIVSKA---TGTMGAKITFDNKEVTLNSEVIILAVKP-HIVPVAL-NDIK 197 (303)
Q Consensus 132 ~mkIgIIGlG~MG~~~La~a---------l~r~~e~---l~e~Gv~v~~d~~eav~~ADIVILAVpP-~~v~~VL-~eI~ 197 (303)
..||||||||.||.+|.... ++++.++ +.+.|+.+..++.|++++||+||+||++ .++.+++ .++.
T Consensus 5 s~kIgfIGLG~MG~~mA~~L~~~G~~V~v~dr~~~~~~~l~~~G~~~~~s~~e~~~~~dvvi~~l~~~~~~~~v~~~~~~ 84 (297)
T 4gbj_A 5 SEKIAFLGLGNLGTPIAEILLEAGYELVVWNRTASKAEPLTKLGATVVENAIDAITPGGIVFSVLADDAAVEELFSMELV 84 (297)
T ss_dssp CCEEEEECCSTTHHHHHHHHHHTTCEEEEC-------CTTTTTTCEECSSGGGGCCTTCEEEECCSSHHHHHHHSCHHHH
T ss_pred CCcEEEEecHHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHcCCeEeCCHHHHHhcCCceeeeccchhhHHHHHHHHHH
Confidence 35899999999999754333 2344433 4567999999999999999999999985 4556655 4566
Q ss_pred cccCCCCEEEEecCCCcHH---HHHhhCC-CCCceEEE-ecCcHHhhhCC-cEEEEeCCCCCHHHHHHHHHHHHhcCCc-
Q psy6714 198 PVFNESNLLISVAGGVPIK---NMEQALP-KNSRIIRA-MPNTPALVRQG-ASVFVRGSSASDQDAQTVINLFKSVGTC- 270 (303)
Q Consensus 198 ~~L~~g~IVVSiaaGV~ie---~L~~~l~-~~~~VVr~-mPn~p~~v~~G-~til~~g~~~~~e~~e~V~~Lfs~iG~~- 270 (303)
+.++++++||.+. .++.+ .+.+.+. .+..++.+ +...+.....| .++++.+ +++.++.++.+|+.+|..
T Consensus 85 ~~~~~~~iiid~s-T~~p~~~~~~~~~~~~~g~~~ldapVsGg~~~a~~g~l~im~gG---~~~~~~~~~~~l~~~g~~i 160 (297)
T 4gbj_A 85 EKLGKDGVHVSMS-TISPETSRQLAQVHEWYGAHYVGAPIFARPEAVRAKVGNICLSG---NAGAKERIKPIVENFVKGV 160 (297)
T ss_dssp HHHCTTCEEEECS-CCCHHHHHHHHHHHHHTTCEEEECCEECCHHHHHHTCCEEEEEE---CHHHHHHHHHHHHTTCSEE
T ss_pred hhcCCCeEEEECC-CCChHHHHHHHHHHHhcCCceecCCcCCCccccccccceeeccc---chhHHHHHHHHHHHhhCCe
Confidence 6677888888554 34443 3444332 12333322 12223333344 4666666 788999999999999985
Q ss_pred EEcC
Q psy6714 271 EEVP 274 (303)
Q Consensus 271 v~vd 274 (303)
+++-
T Consensus 161 ~~~g 164 (297)
T 4gbj_A 161 FDFG 164 (297)
T ss_dssp EECC
T ss_pred EEec
Confidence 4453
No 57
>3pdu_A 3-hydroxyisobutyrate dehydrogenase family protein; gamma-hydroxybutyrate dehydrogenase, succinic semialdehyde R glyoxylate metabolism; HET: NAP; 1.89A {Geobacter sulfurreducens}
Probab=99.30 E-value=2.2e-11 Score=111.68 Aligned_cols=138 Identities=17% Similarity=0.168 Sum_probs=95.8
Q ss_pred CCcEEEEcCChhhHHHHHHHH----------hhcH---HHHhhCCCeEecChHHhhcCCCEEEEeeCCc-cHHHHH---H
Q psy6714 132 RSDKQIAGTTERGPGALIASL----------NIVS---KATGTMGAKITFDNKEVTLNSEVIILAVKPH-IVPVAL---N 194 (303)
Q Consensus 132 ~mkIgIIGlG~MG~~~La~al----------~r~~---e~l~e~Gv~v~~d~~eav~~ADIVILAVpP~-~v~~VL---~ 194 (303)
||||+|||+|.||.+ ++..+ +++. +.+.+.|+....++.+++++||+||+|||+. ++++++ +
T Consensus 1 M~~I~iiG~G~mG~~-~a~~l~~~G~~V~~~dr~~~~~~~~~~~g~~~~~~~~~~~~~advvi~~v~~~~~~~~v~~~~~ 79 (287)
T 3pdu_A 1 MTTYGFLGLGIMGGP-MAANLVRAGFDVTVWNRNPAKCAPLVALGARQASSPAEVCAACDITIAMLADPAAAREVCFGAN 79 (287)
T ss_dssp CCCEEEECCSTTHHH-HHHHHHHHTCCEEEECSSGGGGHHHHHHTCEECSCHHHHHHHCSEEEECCSSHHHHHHHHHSTT
T ss_pred CCeEEEEccCHHHHH-HHHHHHHCCCeEEEEcCCHHHHHHHHHCCCeecCCHHHHHHcCCEEEEEcCCHHHHHHHHcCch
Confidence 579999999999995 55432 2222 3455668888889999999999999999975 899999 7
Q ss_pred hhccccCCCCEEEEecCCCcHH---HHHhhCCC-CCceEEEecC--cHHhhhCCc-EEEEeCCCCCHHHHHHHHHHHHhc
Q psy6714 195 DIKPVFNESNLLISVAGGVPIK---NMEQALPK-NSRIIRAMPN--TPALVRQGA-SVFVRGSSASDQDAQTVINLFKSV 267 (303)
Q Consensus 195 eI~~~L~~g~IVVSiaaGV~ie---~L~~~l~~-~~~VVr~mPn--~p~~v~~G~-til~~g~~~~~e~~e~V~~Lfs~i 267 (303)
++.+.+.++++||++.. ++.. .+.+.+.. +..++.. |. .+.....|. ++++.+ +++..+.++++|+.+
T Consensus 80 ~l~~~l~~g~~vv~~st-~~~~~~~~~~~~~~~~g~~~~~~-pv~g~~~~a~~g~l~~~~gg---~~~~~~~~~~ll~~~ 154 (287)
T 3pdu_A 80 GVLEGIGGGRGYIDMST-VDDETSTAIGAAVTARGGRFLEA-PVSGTKKPAEDGTLIILAAG---DQSLFTDAGPAFAAL 154 (287)
T ss_dssp CGGGTCCTTCEEEECSC-CCHHHHHHHHHHHHHTTCEEEEC-CEECCHHHHHHTCEEEEEEE---CHHHHHHTHHHHHHH
T ss_pred hhhhcccCCCEEEECCC-CCHHHHHHHHHHHHHcCCEEEEC-CccCCHHHHhcCCEEEEEeC---CHHHHHHHHHHHHHh
Confidence 88888888999987654 3332 34333321 2333332 32 233334454 555655 688999999999999
Q ss_pred CCc-EEcCC
Q psy6714 268 GTC-EEVPE 275 (303)
Q Consensus 268 G~~-v~vdE 275 (303)
|.. +.+.+
T Consensus 155 g~~~~~~g~ 163 (287)
T 3pdu_A 155 GKKCLHLGE 163 (287)
T ss_dssp EEEEEECSS
T ss_pred CCCEEEcCC
Confidence 974 55654
No 58
>2p4q_A 6-phosphogluconate dehydrogenase, decarboxylating; rossmann fold, oxidoreductase; HET: FLC; 2.37A {Saccharomyces cerevisiae}
Probab=99.30 E-value=1.1e-11 Score=123.58 Aligned_cols=134 Identities=18% Similarity=0.198 Sum_probs=97.4
Q ss_pred CCcEEEEcCChhhHHHHHHHH----------hhcHH---HHhh-----CCCeEecChHHhhcC---CCEEEEeeCC-ccH
Q psy6714 132 RSDKQIAGTTERGPGALIASL----------NIVSK---ATGT-----MGAKITFDNKEVTLN---SEVIILAVKP-HIV 189 (303)
Q Consensus 132 ~mkIgIIGlG~MG~~~La~al----------~r~~e---~l~e-----~Gv~v~~d~~eav~~---ADIVILAVpP-~~v 189 (303)
..+|||||+|.||.+ |+..+ ++..+ .+.+ .|+..+.++.++++. +|+||+|||+ +.+
T Consensus 10 ~~~IgvIGlG~MG~~-lA~~La~~G~~V~v~dr~~~~~~~l~~~~~~~~gi~~~~s~~e~v~~l~~aDvVil~Vp~~~~v 88 (497)
T 2p4q_A 10 SADFGLIGLAVMGQN-LILNAADHGFTVCAYNRTQSKVDHFLANEAKGKSIIGATSIEDFISKLKRPRKVMLLVKAGAPV 88 (497)
T ss_dssp CCSEEEECCSHHHHH-HHHHHHHTTCCEEEECSSSHHHHHHHHTTTTTSSEECCSSHHHHHHTSCSSCEEEECCCSSHHH
T ss_pred CCCEEEEeeHHHHHH-HHHHHHHCCCEEEEEeCCHHHHHHHHcccccCCCeEEeCCHHHHHhcCCCCCEEEEEcCChHHH
Confidence 358999999999995 55442 22222 3334 577777888888877 9999999998 589
Q ss_pred HHHHHhhccccCCCCEEEEecCCCcH--HHHHhhCCC-CCceEEEec--CcHHhhhCCcEEEEeCCCCCHHHHHHHHHHH
Q psy6714 190 PVALNDIKPVFNESNLLISVAGGVPI--KNMEQALPK-NSRIIRAMP--NTPALVRQGASVFVRGSSASDQDAQTVINLF 264 (303)
Q Consensus 190 ~~VL~eI~~~L~~g~IVVSiaaGV~i--e~L~~~l~~-~~~VVr~mP--n~p~~v~~G~til~~g~~~~~e~~e~V~~Lf 264 (303)
+++++++.+.++++++||++.++... ..+.+.+.. +..++. +| +.+.....|.++++.+ +++..+.++++|
T Consensus 89 ~~vl~~l~~~l~~g~iIId~s~~~~~~~~~l~~~l~~~g~~~v~-~pVsgg~~~a~~G~~im~gg---~~e~~~~v~~ll 164 (497)
T 2p4q_A 89 DALINQIVPLLEKGDIIIDGGNSHFPDSNRRYEELKKKGILFVG-SGVSGGEEGARYGPSLMPGG---SEEAWPHIKNIF 164 (497)
T ss_dssp HHHHHHHGGGCCTTCEEEECSCCCHHHHHHHHHHHHHTTCEEEE-EEEESHHHHHHHCCEEEEEE---CGGGHHHHHHHH
T ss_pred HHHHHHHHHhCCCCCEEEECCCCChhHHHHHHHHHHHcCCceeC-CCcccChhHhhcCCeEEecC---CHHHHHHHHHHH
Confidence 99999999999889999998887754 345554432 234442 34 4455555677666655 677889999999
Q ss_pred HhcCCc
Q psy6714 265 KSVGTC 270 (303)
Q Consensus 265 s~iG~~ 270 (303)
+.+|..
T Consensus 165 ~~~g~~ 170 (497)
T 2p4q_A 165 QSISAK 170 (497)
T ss_dssp HHHSCE
T ss_pred HHhcCc
Confidence 999975
No 59
>3doj_A AT3G25530, dehydrogenase-like protein; gamma-hydroxybutyrate dehydrogenase, 4-hydroxybutyrate dehydrogenase; 2.10A {Arabidopsis thaliana}
Probab=99.30 E-value=2.7e-11 Score=112.79 Aligned_cols=139 Identities=15% Similarity=0.179 Sum_probs=96.2
Q ss_pred CCCcEEEEcCChhhHHHHHHHH----------hhcH---HHHhhCCCeEecChHHhhcCCCEEEEeeC-CccHHHHH---
Q psy6714 131 NRSDKQIAGTTERGPGALIASL----------NIVS---KATGTMGAKITFDNKEVTLNSEVIILAVK-PHIVPVAL--- 193 (303)
Q Consensus 131 ~~mkIgIIGlG~MG~~~La~al----------~r~~---e~l~e~Gv~v~~d~~eav~~ADIVILAVp-P~~v~~VL--- 193 (303)
.||||+|||+|.||.+ ++..+ +++. +.+.+.|+....++.+++++||+||+||| +.++++++
T Consensus 20 ~m~~I~iIG~G~mG~~-~A~~l~~~G~~V~~~dr~~~~~~~l~~~g~~~~~~~~~~~~~aDvvi~~vp~~~~~~~v~~~~ 98 (310)
T 3doj_A 20 HMMEVGFLGLGIMGKA-MSMNLLKNGFKVTVWNRTLSKCDELVEHGASVCESPAEVIKKCKYTIAMLSDPCAALSVVFDK 98 (310)
T ss_dssp CSCEEEEECCSHHHHH-HHHHHHHTTCEEEEECSSGGGGHHHHHTTCEECSSHHHHHHHCSEEEECCSSHHHHHHHHHST
T ss_pred cCCEEEEECccHHHHH-HHHHHHHCCCeEEEEeCCHHHHHHHHHCCCeEcCCHHHHHHhCCEEEEEcCCHHHHHHHHhCc
Confidence 4799999999999995 55442 2222 34557799888999999999999999997 56899999
Q ss_pred HhhccccCCCCEEEEecCCCcHH---HHHhhCCC-CCceEEEecC--cHHhhhCCc-EEEEeCCCCCHHHHHHHHHHHHh
Q psy6714 194 NDIKPVFNESNLLISVAGGVPIK---NMEQALPK-NSRIIRAMPN--TPALVRQGA-SVFVRGSSASDQDAQTVINLFKS 266 (303)
Q Consensus 194 ~eI~~~L~~g~IVVSiaaGV~ie---~L~~~l~~-~~~VVr~mPn--~p~~v~~G~-til~~g~~~~~e~~e~V~~Lfs~ 266 (303)
+++.+.+.++++||++. +++.. .+.+.+.. +..++. +|. .+.....|. ++++.+ +++.++.++++|+.
T Consensus 99 ~~l~~~l~~g~~vv~~s-t~~~~~~~~~~~~~~~~g~~~v~-~pv~g~~~~a~~g~l~i~~gg---~~~~~~~~~~ll~~ 173 (310)
T 3doj_A 99 GGVLEQICEGKGYIDMS-TVDAETSLKINEAITGKGGRFVE-GPVSGSKKPAEDGQLIILAAG---DKALFEESIPAFDV 173 (310)
T ss_dssp TCGGGGCCTTCEEEECS-CCCHHHHHHHHHHHHHTTCEEEE-CCEECCHHHHHHTCEEEEEEE---CHHHHHHHHHHHHH
T ss_pred hhhhhccCCCCEEEECC-CCCHHHHHHHHHHHHHcCCEEEe-CCCCCChhHHhcCCeEEEEcC---CHHHHHHHHHHHHH
Confidence 78888888999988765 44443 33333321 223332 232 122223343 466665 68899999999999
Q ss_pred cCCc-EEcCC
Q psy6714 267 VGTC-EEVPE 275 (303)
Q Consensus 267 iG~~-v~vdE 275 (303)
+|.. +.+.+
T Consensus 174 ~g~~~~~~g~ 183 (310)
T 3doj_A 174 LGKRSFYLGQ 183 (310)
T ss_dssp HEEEEEECSS
T ss_pred hCCCEEEeCC
Confidence 9974 56654
No 60
>3pef_A 6-phosphogluconate dehydrogenase, NAD-binding; gamma-hydroxybutyrate dehydrogenase, succinic semialdehyde R geobacter metallireducens; HET: NAP; 2.07A {Geobacter metallireducens}
Probab=99.29 E-value=1.9e-11 Score=112.17 Aligned_cols=146 Identities=14% Similarity=0.153 Sum_probs=99.3
Q ss_pred CcEEEEcCChhhHHHHHHHH----------hhcH---HHHhhCCCeEecChHHhhcCCCEEEEeeC-CccHHHHH---Hh
Q psy6714 133 SDKQIAGTTERGPGALIASL----------NIVS---KATGTMGAKITFDNKEVTLNSEVIILAVK-PHIVPVAL---ND 195 (303)
Q Consensus 133 mkIgIIGlG~MG~~~La~al----------~r~~---e~l~e~Gv~v~~d~~eav~~ADIVILAVp-P~~v~~VL---~e 195 (303)
|||+|||+|.||.+ ++..+ +++. +.+.+.|+....+..+++++||+||+||| +.++++++ ++
T Consensus 2 ~~i~iIG~G~mG~~-~a~~l~~~G~~V~~~dr~~~~~~~~~~~g~~~~~~~~~~~~~aDvvi~~vp~~~~~~~v~~~~~~ 80 (287)
T 3pef_A 2 QKFGFIGLGIMGSA-MAKNLVKAGCSVTIWNRSPEKAEELAALGAERAATPCEVVESCPVTFAMLADPAAAEEVCFGKHG 80 (287)
T ss_dssp CEEEEECCSHHHHH-HHHHHHHTTCEEEEECSSGGGGHHHHHTTCEECSSHHHHHHHCSEEEECCSSHHHHHHHHHSTTC
T ss_pred CEEEEEeecHHHHH-HHHHHHHCCCeEEEEcCCHHHHHHHHHCCCeecCCHHHHHhcCCEEEEEcCCHHHHHHHHcCcch
Confidence 78999999999995 55442 2222 34556789888899999999999999999 68999999 88
Q ss_pred hccccCCCCEEEEecCCCcHH---HHHhhCCC-CCceEEEecCc--HHhhhCCc-EEEEeCCCCCHHHHHHHHHHHHhcC
Q psy6714 196 IKPVFNESNLLISVAGGVPIK---NMEQALPK-NSRIIRAMPNT--PALVRQGA-SVFVRGSSASDQDAQTVINLFKSVG 268 (303)
Q Consensus 196 I~~~L~~g~IVVSiaaGV~ie---~L~~~l~~-~~~VVr~mPn~--p~~v~~G~-til~~g~~~~~e~~e~V~~Lfs~iG 268 (303)
+.+.++++++||++ ++++.. .+.+.+.. +..++. +|.. +.....|. ++++.+ +++..+.++++|+.+|
T Consensus 81 l~~~l~~~~~vi~~-st~~~~~~~~~~~~~~~~g~~~~~-~pv~g~~~~a~~g~l~~~~gg---~~~~~~~~~~ll~~~g 155 (287)
T 3pef_A 81 VLEGIGEGRGYVDM-STVDPATSQRIGVAVVAKGGRFLE-APVSGSKKPAEDGTLIILAAG---DRNLYDEAMPGFEKMG 155 (287)
T ss_dssp HHHHCCTTCEEEEC-SCCCHHHHHHHHHHHHHTTCEEEE-CCEECCHHHHHHTCEEEEEEE---CHHHHHHHHHHHHHHE
T ss_pred HhhcCCCCCEEEeC-CCCCHHHHHHHHHHHHHhCCEEEE-CCCcCCHHHHhcCCEEEEEeC---CHHHHHHHHHHHHHhC
Confidence 88888889998876 455543 33333321 223332 3321 22223343 555655 6788999999999999
Q ss_pred C-cEEcCCCCchhhhhh
Q psy6714 269 T-CEEVPEYLLDGITGL 284 (303)
Q Consensus 269 ~-~v~vdE~~~Da~tAl 284 (303)
. ++.+.+..+...+-+
T Consensus 156 ~~~~~~g~~g~~~~~Kl 172 (287)
T 3pef_A 156 KKIIHLGDVGKGAEMKL 172 (287)
T ss_dssp EEEEECSSTTHHHHHHH
T ss_pred CCeEEeCCCCHHHHHHH
Confidence 7 466665544444333
No 61
>3qha_A Putative oxidoreductase; seattle structural genomics center for infectious disease, S mycobacterium avium 104, rossmann fold; 2.25A {Mycobacterium avium}
Probab=99.28 E-value=5.9e-11 Score=109.85 Aligned_cols=137 Identities=14% Similarity=0.183 Sum_probs=95.1
Q ss_pred CCcEEEEcCChhhHHHHHHHH----------hhcH---HHHhhCCCeEecChHHhhcCCCEEEEeeC-CccHHHHHHhhc
Q psy6714 132 RSDKQIAGTTERGPGALIASL----------NIVS---KATGTMGAKITFDNKEVTLNSEVIILAVK-PHIVPVALNDIK 197 (303)
Q Consensus 132 ~mkIgIIGlG~MG~~~La~al----------~r~~---e~l~e~Gv~v~~d~~eav~~ADIVILAVp-P~~v~~VL~eI~ 197 (303)
+|||+|||+|.||.+ ++..+ +++. +.+.+.|+..+.+..++++ ||+||+||| +.+++++++++.
T Consensus 15 ~~~I~vIG~G~mG~~-~A~~l~~~G~~V~~~dr~~~~~~~~~~~g~~~~~~~~~~~~-aDvvi~~vp~~~~~~~v~~~l~ 92 (296)
T 3qha_A 15 QLKLGYIGLGNMGAP-MATRMTEWPGGVTVYDIRIEAMTPLAEAGATLADSVADVAA-ADLIHITVLDDAQVREVVGELA 92 (296)
T ss_dssp CCCEEEECCSTTHHH-HHHHHTTSTTCEEEECSSTTTSHHHHHTTCEECSSHHHHTT-SSEEEECCSSHHHHHHHHHHHH
T ss_pred CCeEEEECcCHHHHH-HHHHHHHCCCeEEEEeCCHHHHHHHHHCCCEEcCCHHHHHh-CCEEEEECCChHHHHHHHHHHH
Confidence 479999999999994 55543 2222 3456779988889999999 999999999 568999999998
Q ss_pred cccCCCCEEEEecCCCcH---HHHHhhCCC-CCceEEEecC--cHHhhhCCc-EEEEeCCCCCHHHHHHHHHHHHhcCCc
Q psy6714 198 PVFNESNLLISVAGGVPI---KNMEQALPK-NSRIIRAMPN--TPALVRQGA-SVFVRGSSASDQDAQTVINLFKSVGTC 270 (303)
Q Consensus 198 ~~L~~g~IVVSiaaGV~i---e~L~~~l~~-~~~VVr~mPn--~p~~v~~G~-til~~g~~~~~e~~e~V~~Lfs~iG~~ 270 (303)
+.++++++||++.. +.. ..+.+.+.. +..++.. |. .+.....|. ++++.+ +++..+.++++|+.+|..
T Consensus 93 ~~l~~g~ivv~~st-~~~~~~~~~~~~~~~~g~~~~~~-pv~g~~~~a~~g~l~~~~gg---~~~~~~~~~~ll~~~g~~ 167 (296)
T 3qha_A 93 GHAKPGTVIAIHST-ISDTTAVELARDLKARDIHIVDA-PVSGGAAAAARGELATMVGA---DREVYERIKPAFKHWAAV 167 (296)
T ss_dssp TTCCTTCEEEECSC-CCHHHHHHHHHHHGGGTCEEEEC-CEESCHHHHHHTCEEEEEEC---CHHHHHHHHHHHHHHEEE
T ss_pred HhcCCCCEEEEeCC-CCHHHHHHHHHHHHHcCCEEEeC-CCcCCHHHHhcCCccEEecC---CHHHHHHHHHHHHHHcCC
Confidence 88889999886654 433 234444432 2233321 22 122233444 555555 688999999999999974
Q ss_pred -EEcCC
Q psy6714 271 -EEVPE 275 (303)
Q Consensus 271 -v~vdE 275 (303)
+.+.+
T Consensus 168 ~~~~g~ 173 (296)
T 3qha_A 168 VIHAGE 173 (296)
T ss_dssp EEEEES
T ss_pred eEEcCC
Confidence 55543
No 62
>3g0o_A 3-hydroxyisobutyrate dehydrogenase; NAD(P), valine catabolism, tartaric acid, target 11128H, NYSGXRC, PSI-2, structural genomics; HET: TLA; 1.80A {Salmonella typhimurium}
Probab=99.27 E-value=5.9e-11 Score=109.92 Aligned_cols=139 Identities=15% Similarity=0.213 Sum_probs=96.1
Q ss_pred CCCcEEEEcCChhhHHHHHHHH----------hhcHH---HHhhCCCeE-ecChHHhhcCCCEEEEeeCC-ccHHHHH--
Q psy6714 131 NRSDKQIAGTTERGPGALIASL----------NIVSK---ATGTMGAKI-TFDNKEVTLNSEVIILAVKP-HIVPVAL-- 193 (303)
Q Consensus 131 ~~mkIgIIGlG~MG~~~La~al----------~r~~e---~l~e~Gv~v-~~d~~eav~~ADIVILAVpP-~~v~~VL-- 193 (303)
++|||+|||+|.||.+ ++..+ +++.+ .+.+.|+.. ..++.+++++||+||+|||+ ..++.++
T Consensus 6 ~~~~I~iIG~G~mG~~-~a~~l~~~G~~V~~~dr~~~~~~~~~~~g~~~~~~~~~e~~~~aDvvi~~vp~~~~~~~v~~~ 84 (303)
T 3g0o_A 6 TDFHVGIVGLGSMGMG-AARSCLRAGLSTWGADLNPQACANLLAEGACGAAASAREFAGVVDALVILVVNAAQVRQVLFG 84 (303)
T ss_dssp -CCEEEEECCSHHHHH-HHHHHHHTTCEEEEECSCHHHHHHHHHTTCSEEESSSTTTTTTCSEEEECCSSHHHHHHHHC-
T ss_pred CCCeEEEECCCHHHHH-HHHHHHHCCCeEEEEECCHHHHHHHHHcCCccccCCHHHHHhcCCEEEEECCCHHHHHHHHhC
Confidence 3689999999999995 55442 23333 345678876 78889999999999999996 5788888
Q ss_pred -HhhccccCCCCEEEEecCCCcH---HHHHhhCCC-CCceEEEecC--cHHhhhCCc-EEEEeCCCCCHHHHHHHHHHHH
Q psy6714 194 -NDIKPVFNESNLLISVAGGVPI---KNMEQALPK-NSRIIRAMPN--TPALVRQGA-SVFVRGSSASDQDAQTVINLFK 265 (303)
Q Consensus 194 -~eI~~~L~~g~IVVSiaaGV~i---e~L~~~l~~-~~~VVr~mPn--~p~~v~~G~-til~~g~~~~~e~~e~V~~Lfs 265 (303)
+++.+.++++++||++.. ++. ..+.+.+.. +..++. +|. .+.....|. ++++.+ +++..+.++++|+
T Consensus 85 ~~~l~~~l~~g~ivv~~st-~~~~~~~~~~~~~~~~g~~~~~-~pv~g~~~~a~~g~l~~~~gg---~~~~~~~~~~ll~ 159 (303)
T 3g0o_A 85 EDGVAHLMKPGSAVMVSST-ISSADAQEIAAALTALNLNMLD-APVSGGAVKAAQGEMTVMASG---SEAAFTRLKPVLD 159 (303)
T ss_dssp -CCCGGGSCTTCEEEECSC-CCHHHHHHHHHHHHTTTCEEEE-CCEESCHHHHHTTCEEEEEEC---CHHHHHHHHHHHH
T ss_pred hhhHHhhCCCCCEEEecCC-CCHHHHHHHHHHHHHcCCeEEe-CCCCCChhhhhcCCeEEEeCC---CHHHHHHHHHHHH
Confidence 788888889999986654 443 334444432 233443 342 233344554 455554 6889999999999
Q ss_pred hcCCc-EEcCC
Q psy6714 266 SVGTC-EEVPE 275 (303)
Q Consensus 266 ~iG~~-v~vdE 275 (303)
.+|.. +.+.+
T Consensus 160 ~~g~~~~~~~~ 170 (303)
T 3g0o_A 160 AVASNVYRISD 170 (303)
T ss_dssp HHEEEEEEEES
T ss_pred HHCCCEEECCC
Confidence 99974 55654
No 63
>2pgd_A 6-phosphogluconate dehydrogenase; oxidoreductase (CHOH(D)-NADP+(A)); 2.00A {Ovis aries} SCOP: a.100.1.1 c.2.1.6 PDB: 1pgo_A* 1pgp_A* 1pgq_A* 1pgn_A 2jkv_A*
Probab=99.27 E-value=2.2e-11 Score=120.60 Aligned_cols=135 Identities=16% Similarity=0.173 Sum_probs=97.1
Q ss_pred CCcEEEEcCChhhHHHHHHHH----------hhcHH---HHhh-----CCCeEecChHHhhc---CCCEEEEeeCCc-cH
Q psy6714 132 RSDKQIAGTTERGPGALIASL----------NIVSK---ATGT-----MGAKITFDNKEVTL---NSEVIILAVKPH-IV 189 (303)
Q Consensus 132 ~mkIgIIGlG~MG~~~La~al----------~r~~e---~l~e-----~Gv~v~~d~~eav~---~ADIVILAVpP~-~v 189 (303)
+|||||||+|.||.. ++..+ ++..+ .+.+ .|+..+.++.++++ ++|+||+|||+. .+
T Consensus 2 ~m~IgvIG~G~mG~~-lA~~La~~G~~V~v~dr~~~~~~~l~~~~~~g~gi~~~~~~~e~v~~l~~aDvVilaVp~~~~v 80 (482)
T 2pgd_A 2 QADIALIGLAVMGQN-LILNMNDHGFVVCAFNRTVSKVDDFLANEAKGTKVLGAHSLEEMVSKLKKPRRIILLVKAGQAV 80 (482)
T ss_dssp CBSEEEECCSHHHHH-HHHHHHHTTCCEEEECSSTHHHHHHHHTTTTTSSCEECSSHHHHHHHBCSSCEEEECSCTTHHH
T ss_pred CCeEEEEChHHHHHH-HHHHHHHCCCeEEEEeCCHHHHHHHHhccccCCCeEEeCCHHHHHhhccCCCEEEEeCCChHHH
Confidence 378999999999994 55442 22222 3444 67888888888874 899999999985 89
Q ss_pred HHHHHhhccccCCCCEEEEecCCCcH--HHHHhhCCC-CCceEEEecCc--HHhhhCCcEEEEeCCCCCHHHHHHHHHHH
Q psy6714 190 PVALNDIKPVFNESNLLISVAGGVPI--KNMEQALPK-NSRIIRAMPNT--PALVRQGASVFVRGSSASDQDAQTVINLF 264 (303)
Q Consensus 190 ~~VL~eI~~~L~~g~IVVSiaaGV~i--e~L~~~l~~-~~~VVr~mPn~--p~~v~~G~til~~g~~~~~e~~e~V~~Lf 264 (303)
.++++++.++++++++||++.++... ..+.+.+.. +..++ .+|.. +...+.|.++++.+ +++..+.++++|
T Consensus 81 ~~vl~~l~~~l~~g~iII~~s~~~~~~~~~l~~~l~~~g~~~v-~~pv~g~~~~a~~g~~i~~gg---~~e~~~~v~~ll 156 (482)
T 2pgd_A 81 DNFIEKLVPLLDIGDIIIDGGNSEYRDTMRRCRDLKDKGILFV-GSGVSGGEDGARYGPSLMPGG---NKEAWPHIKAIF 156 (482)
T ss_dssp HHHHHHHHHHCCTTCEEEECSCCCHHHHHHHHHHHHHTTCEEE-EEEEESHHHHHHHCCEEEEEE---CTTTHHHHHHHH
T ss_pred HHHHHHHHhhcCCCCEEEECCCCCHHHHHHHHHHHHHcCCeEe-CCCCCCChhhhccCCeEEeCC---CHHHHHHHHHHH
Confidence 99999999889889999998888864 345554432 23444 34543 33445666665555 466789999999
Q ss_pred HhcCCcE
Q psy6714 265 KSVGTCE 271 (303)
Q Consensus 265 s~iG~~v 271 (303)
+.+|..+
T Consensus 157 ~~~g~~v 163 (482)
T 2pgd_A 157 QGIAAKV 163 (482)
T ss_dssp HHHSCBC
T ss_pred HHhhhhc
Confidence 9999764
No 64
>3ego_A Probable 2-dehydropantoate 2-reductase; structural genomics, PANE, unknown function, cytoplasm, NADP, oxidoreductase; 1.90A {Bacillus subtilis}
Probab=99.24 E-value=5.5e-12 Score=117.62 Aligned_cols=155 Identities=12% Similarity=0.117 Sum_probs=101.5
Q ss_pred CCCcEEEEcCChhhHHHHHHHHh---------hcH---HHHhhCCCeEecCh----------HHhhcCCCEEEEeeCCcc
Q psy6714 131 NRSDKQIAGTTERGPGALIASLN---------IVS---KATGTMGAKITFDN----------KEVTLNSEVIILAVKPHI 188 (303)
Q Consensus 131 ~~mkIgIIGlG~MG~~~La~al~---------r~~---e~l~e~Gv~v~~d~----------~eav~~ADIVILAVpP~~ 188 (303)
|+|||+|||+|.||+ .++..+. +.. +.+++.|+.+..+. .+.+..+|+||||||+++
T Consensus 1 M~mkI~IiGaGa~G~-~~a~~L~~g~~V~~~~r~~~~~~~l~~~G~~~~~~~~~~~~~~~~~~~~~~~~D~vilavK~~~ 79 (307)
T 3ego_A 1 MSLKIGIIGGGSVGL-LCAYYLSLYHDVTVVTRRQEQAAAIQSEGIRLYKGGEEFRADCSADTSINSDFDLLVVTVKQHQ 79 (307)
T ss_dssp -CCEEEEECCSHHHH-HHHHHHHTTSEEEEECSCHHHHHHHHHHCEEEEETTEEEEECCEEESSCCSCCSEEEECCCGGG
T ss_pred CCCEEEEECCCHHHH-HHHHHHhcCCceEEEECCHHHHHHHHhCCceEecCCCeecccccccccccCCCCEEEEEeCHHH
Confidence 468999999999999 5654432 112 23455676553211 245678999999999999
Q ss_pred HHHHHHhhccccCCCCEEEEecCCCcHH-HHHhhCCCCCceEEEecCcHHhh---------hCCcEEEEeCCCCCHHHHH
Q psy6714 189 VPVALNDIKPVFNESNLLISVAGGVPIK-NMEQALPKNSRIIRAMPNTPALV---------RQGASVFVRGSSASDQDAQ 258 (303)
Q Consensus 189 v~~VL~eI~~~L~~g~IVVSiaaGV~ie-~L~~~l~~~~~VVr~mPn~p~~v---------~~G~til~~g~~~~~e~~e 258 (303)
+.++++++++. .+++ |||+++|+..+ .+++.++. .+++..+..+.+.. +.|.+.+-..+. ..+..+
T Consensus 80 ~~~~l~~l~~~-~~~~-ivs~~nGi~~~e~l~~~~~~-~~vl~g~~~~~a~~~~pg~v~~~~~g~~~iG~~~~-~~~~~~ 155 (307)
T 3ego_A 80 LQSVFSSLERI-GKTN-ILFLQNGMGHIHDLKDWHVG-HSIYVGIVEHGAVRKSDTAVDHTGLGAIKWSAFDD-AEPDRL 155 (307)
T ss_dssp HHHHHHHTTSS-CCCE-EEECCSSSHHHHHHHTCCCS-CEEEEEEECCEEEECSSSEEEEEECCCEEEEECTT-CCGGGG
T ss_pred HHHHHHHhhcC-CCCe-EEEecCCccHHHHHHHhCCC-CcEEEEEEeeceEECCCCEEEEeeeeeEEEEeCCC-CcHHHH
Confidence 99999999875 5666 99999999985 77888774 56766665544322 123222211111 133445
Q ss_pred HHHHHHHhcCCcEEcCCCC-------------chhhhhhccchHH
Q psy6714 259 TVINLFKSVGTCEEVPEYL-------------LDGITGLSGSGPA 290 (303)
Q Consensus 259 ~V~~Lfs~iG~~v~vdE~~-------------~Da~tAlsGsgPA 290 (303)
.+.++|+..|..+.++++. ++.++|+.+|.-+
T Consensus 156 ~l~~~l~~ag~~~~~~~di~~~~W~Kl~~N~~~N~ltal~~~~~g 200 (307)
T 3ego_A 156 NILFQHNHSDFPIYYETDWYRLLTGKLIVNACINPLTALLQVKNG 200 (307)
T ss_dssp TTTTSSCCTTSCEEECSCHHHHHHHHHHHHHHHHHHHHHHTCCTT
T ss_pred HHHHHhhhCCCCcEechhHHHHHHHHHHHhhhhhHHHHHhcCCcc
Confidence 5666777778777776654 5777888776533
No 65
>3l6d_A Putative oxidoreductase; structural genomics, protein structure initiative, oxidoredu PSI-2; HET: MSE; 1.90A {Pseudomonas putida}
Probab=99.21 E-value=6.9e-11 Score=110.02 Aligned_cols=137 Identities=10% Similarity=0.060 Sum_probs=92.5
Q ss_pred CCCcEEEEcCChhhHHHHHHHH----------hhcHH---HHhhCCCeEecChHHhhcCCCEEEEeeCCc-cHHHHHH--
Q psy6714 131 NRSDKQIAGTTERGPGALIASL----------NIVSK---ATGTMGAKITFDNKEVTLNSEVIILAVKPH-IVPVALN-- 194 (303)
Q Consensus 131 ~~mkIgIIGlG~MG~~~La~al----------~r~~e---~l~e~Gv~v~~d~~eav~~ADIVILAVpP~-~v~~VL~-- 194 (303)
.+|||||||+|.||.+ ++..+ +++.+ .+.+.|+....++.+++++||+||+|||.. ++++++.
T Consensus 8 ~~~~IgiIG~G~mG~~-~A~~l~~~G~~V~~~dr~~~~~~~~~~~g~~~~~~~~e~~~~aDvVi~~vp~~~~~~~v~~~~ 86 (306)
T 3l6d_A 8 FEFDVSVIGLGAMGTI-MAQVLLKQGKRVAIWNRSPGKAAALVAAGAHLCESVKAALSASPATIFVLLDNHATHEVLGMP 86 (306)
T ss_dssp CSCSEEEECCSHHHHH-HHHHHHHTTCCEEEECSSHHHHHHHHHHTCEECSSHHHHHHHSSEEEECCSSHHHHHHHHTST
T ss_pred CCCeEEEECCCHHHHH-HHHHHHHCCCEEEEEeCCHHHHHHHHHCCCeecCCHHHHHhcCCEEEEEeCCHHHHHHHhccc
Confidence 4689999999999995 55442 23333 345668888889999999999999999955 5888886
Q ss_pred hhccccCCCCEEEEecCCCc--HHHHHhhCC-CCCceEEEecC---cHHhhhCCcEEEEeCCCCCHHHHHHHHHHHHhcC
Q psy6714 195 DIKPVFNESNLLISVAGGVP--IKNMEQALP-KNSRIIRAMPN---TPALVRQGASVFVRGSSASDQDAQTVINLFKSVG 268 (303)
Q Consensus 195 eI~~~L~~g~IVVSiaaGV~--ie~L~~~l~-~~~~VVr~mPn---~p~~v~~G~til~~g~~~~~e~~e~V~~Lfs~iG 268 (303)
.+.. +.++++||++..... ...+.+.+. .+..++.. |. .+.....+.++++.+ +++.++.++++|+.+|
T Consensus 87 ~l~~-~~~g~ivid~st~~~~~~~~l~~~~~~~g~~~vda-pv~g~~~~~~~~~~~i~~gg---~~~~~~~~~~ll~~lg 161 (306)
T 3l6d_A 87 GVAR-ALAHRTIVDYTTNAQDEGLALQGLVNQAGGHYVKG-MIVAYPRNVGHRESHSIHTG---DREAFEQHRALLEGLA 161 (306)
T ss_dssp THHH-HTTTCEEEECCCCCTTHHHHHHHHHHHTTCEEEEE-EEESCGGGTTCTTCEEEEEE---CHHHHHHHHHHHHTTC
T ss_pred chhh-ccCCCEEEECCCCCHHHHHHHHHHHHHcCCeEEec-ccccCcccccCCceEEEEcC---CHHHHHHHHHHHHHhc
Confidence 6654 458888886643222 234444432 23445543 22 122222345666766 6889999999999996
Q ss_pred C-cEEc
Q psy6714 269 T-CEEV 273 (303)
Q Consensus 269 ~-~v~v 273 (303)
. ++++
T Consensus 162 ~~~~~~ 167 (306)
T 3l6d_A 162 GHTVFL 167 (306)
T ss_dssp SEEEEC
T ss_pred CCEEEe
Confidence 4 6677
No 66
>1pgj_A 6PGDH, 6-PGDH, 6-phosphogluconate dehydrogenase; oxidoreductase, CHOH(D)-NADP+(B); 2.82A {Trypanosoma brucei} SCOP: a.100.1.1 c.2.1.6
Probab=99.21 E-value=1.4e-10 Score=115.00 Aligned_cols=133 Identities=14% Similarity=0.164 Sum_probs=94.3
Q ss_pred CcEEEEcCChhhHHHHHHHH----------hhcHHH---Hh-hCC-------CeEecChHHhhc---CCCEEEEeeCCc-
Q psy6714 133 SDKQIAGTTERGPGALIASL----------NIVSKA---TG-TMG-------AKITFDNKEVTL---NSEVIILAVKPH- 187 (303)
Q Consensus 133 mkIgIIGlG~MG~~~La~al----------~r~~e~---l~-e~G-------v~v~~d~~eav~---~ADIVILAVpP~- 187 (303)
|||||||+|.||.. ++..+ ++..++ +. +.| +..+.++.++++ ++|+||+|||+.
T Consensus 2 MkIgVIG~G~mG~~-lA~~La~~G~~V~v~dr~~~~~~~l~~~~g~~~~~~~i~~~~~~~e~v~~l~~aDvVilaVp~~~ 80 (478)
T 1pgj_A 2 MDVGVVGLGVMGAN-LALNIAEKGFKVAVFNRTYSKSEEFMKANASAPFAGNLKAFETMEAFAASLKKPRKALILVQAGA 80 (478)
T ss_dssp BSEEEECCSHHHHH-HHHHHHHTTCCEEEECSSHHHHHHHHHHTTTSTTGGGEEECSCHHHHHHHBCSSCEEEECCCCSH
T ss_pred CEEEEEChHHHHHH-HHHHHHHCCCEEEEEeCCHHHHHHHHHhcCCCCCCCCeEEECCHHHHHhcccCCCEEEEecCChH
Confidence 78999999999994 55442 222232 33 336 666778888876 499999999985
Q ss_pred cHHHHHHhhccccCCCCEEEEecCCCcH--HHHHhhCCC-CCceEEEecCc--HHhhhCCcEEEEeCCCCCHHHHHHHHH
Q psy6714 188 IVPVALNDIKPVFNESNLLISVAGGVPI--KNMEQALPK-NSRIIRAMPNT--PALVRQGASVFVRGSSASDQDAQTVIN 262 (303)
Q Consensus 188 ~v~~VL~eI~~~L~~g~IVVSiaaGV~i--e~L~~~l~~-~~~VVr~mPn~--p~~v~~G~til~~g~~~~~e~~e~V~~ 262 (303)
.++++++++.+.++++++||++.+|... ..+.+.+.. +..++. +|.. +.....|.++++.+ +++..+.+++
T Consensus 81 ~v~~vl~~l~~~l~~g~iIId~sng~~~~~~~l~~~l~~~g~~~v~-~pv~gg~~~a~~g~~i~~gg---~~~~~~~v~~ 156 (478)
T 1pgj_A 81 ATDSTIEQLKKVFEKGDILVDTGNAHFKDQGRRAQQLEAAGLRFLG-MGISGGEEGARKGPAFFPGG---TLSVWEEIRP 156 (478)
T ss_dssp HHHHHHHHHHHHCCTTCEEEECCCCCHHHHHHHHHHHHTTTCEEEE-EEEESHHHHHHHCCEEEEEE---CHHHHHHHHH
T ss_pred HHHHHHHHHHhhCCCCCEEEECCCCChHHHHHHHHHHHHCCCeEEE-eeccCCHHHHhcCCeEeccC---CHHHHHHHHH
Confidence 8999999999889889999998888743 456555542 233332 3433 33344566655554 6888999999
Q ss_pred HHHhcCCc
Q psy6714 263 LFKSVGTC 270 (303)
Q Consensus 263 Lfs~iG~~ 270 (303)
+|+.+|..
T Consensus 157 ll~~~g~~ 164 (478)
T 1pgj_A 157 IVEAAAAK 164 (478)
T ss_dssp HHHHHSCB
T ss_pred HHHHhccc
Confidence 99999975
No 67
>4dll_A 2-hydroxy-3-oxopropionate reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; 2.11A {Polaromonas SP}
Probab=99.19 E-value=1.6e-10 Score=108.11 Aligned_cols=139 Identities=16% Similarity=0.265 Sum_probs=94.1
Q ss_pred CCCcEEEEcCChhhHHHHHHHH----------hhcHH---HHhhCCCeEecChHHhhcCCCEEEEeeC-CccHHHHHH--
Q psy6714 131 NRSDKQIAGTTERGPGALIASL----------NIVSK---ATGTMGAKITFDNKEVTLNSEVIILAVK-PHIVPVALN-- 194 (303)
Q Consensus 131 ~~mkIgIIGlG~MG~~~La~al----------~r~~e---~l~e~Gv~v~~d~~eav~~ADIVILAVp-P~~v~~VL~-- 194 (303)
.+|||+|||+|.||.+ ++..+ ++..+ .+.+.|+....++.+++++||+||+||| +..++.++.
T Consensus 30 ~~~~I~iIG~G~mG~~-~a~~l~~~G~~V~~~dr~~~~~~~l~~~g~~~~~~~~e~~~~aDvVi~~vp~~~~~~~v~~~~ 108 (320)
T 4dll_A 30 YARKITFLGTGSMGLP-MARRLCEAGYALQVWNRTPARAASLAALGATIHEQARAAARDADIVVSMLENGAVVQDVLFAQ 108 (320)
T ss_dssp CCSEEEEECCTTTHHH-HHHHHHHTTCEEEEECSCHHHHHHHHTTTCEEESSHHHHHTTCSEEEECCSSHHHHHHHHTTT
T ss_pred CCCEEEEECccHHHHH-HHHHHHhCCCeEEEEcCCHHHHHHHHHCCCEeeCCHHHHHhcCCEEEEECCCHHHHHHHHcch
Confidence 4789999999999995 55432 23333 3456699888999999999999999999 578889987
Q ss_pred hhccccCCCCEEEEecCCCcHH---HHHhhCCC-CCceEEEecCcH--HhhhCCc-EEEEeCCCCCHHHHHHHHHHHHhc
Q psy6714 195 DIKPVFNESNLLISVAGGVPIK---NMEQALPK-NSRIIRAMPNTP--ALVRQGA-SVFVRGSSASDQDAQTVINLFKSV 267 (303)
Q Consensus 195 eI~~~L~~g~IVVSiaaGV~ie---~L~~~l~~-~~~VVr~mPn~p--~~v~~G~-til~~g~~~~~e~~e~V~~Lfs~i 267 (303)
++.+.+.++++||++.. +... .+.+.+.. +..++.. |... .....|. ++++.+ +++..+.++++|+.+
T Consensus 109 ~~~~~l~~~~~vi~~st-~~~~~~~~~~~~~~~~g~~~~~~-pv~g~~~~a~~g~l~i~~gg---~~~~~~~~~~ll~~~ 183 (320)
T 4dll_A 109 GVAAAMKPGSLFLDMAS-ITPREARDHAARLGALGIAHLDT-PVSGGTVGAEQGTLVIMAGG---KPADFERSLPLLKVF 183 (320)
T ss_dssp CHHHHCCTTCEEEECSC-CCHHHHHHHHHHHHHTTCEEEEC-CEECHHHHHHHTCEEEEEES---CHHHHHHHHHHHHHH
T ss_pred hHHhhCCCCCEEEecCC-CCHHHHHHHHHHHHHcCCEEEeC-CCcCCHhHHhcCCeeEEeCC---CHHHHHHHHHHHHhc
Confidence 77777888999887654 3332 34333321 2333332 3221 1222343 566665 688999999999999
Q ss_pred CCcEEcCC
Q psy6714 268 GTCEEVPE 275 (303)
Q Consensus 268 G~~v~vdE 275 (303)
+.++++.+
T Consensus 184 ~~~~~~g~ 191 (320)
T 4dll_A 184 GRATHVGP 191 (320)
T ss_dssp EEEEEEES
T ss_pred CCEEEeCC
Confidence 33455644
No 68
>4ezb_A Uncharacterized conserved protein; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; 2.10A {Sinorhizobium meliloti}
Probab=99.19 E-value=3.7e-10 Score=105.92 Aligned_cols=134 Identities=14% Similarity=0.215 Sum_probs=90.0
Q ss_pred CCCcEEEEcCChhhHHHHHHHH-----------hhcH----------HHHhhCCCeEec-ChHHhhcCCCEEEEeeCCcc
Q psy6714 131 NRSDKQIAGTTERGPGALIASL-----------NIVS----------KATGTMGAKITF-DNKEVTLNSEVIILAVKPHI 188 (303)
Q Consensus 131 ~~mkIgIIGlG~MG~~~La~al-----------~r~~----------e~l~e~Gv~v~~-d~~eav~~ADIVILAVpP~~ 188 (303)
++|||||||+|.||.+ ++..+ ++.. +.+.+.|+ .. ++.+++++||+||+|||+..
T Consensus 23 M~m~IgvIG~G~mG~~-lA~~L~~~G~~~V~~~dr~~~~~~~~~~~~~~~~~~g~--~~~s~~e~~~~aDvVi~avp~~~ 99 (317)
T 4ezb_A 23 MMTTIAFIGFGEAAQS-IAGGLGGRNAARLAAYDLRFNDPAASGALRARAAELGV--EPLDDVAGIACADVVLSLVVGAA 99 (317)
T ss_dssp SCCEEEEECCSHHHHH-HHHHHHTTTCSEEEEECGGGGCTTTHHHHHHHHHHTTC--EEESSGGGGGGCSEEEECCCGGG
T ss_pred cCCeEEEECccHHHHH-HHHHHHHcCCCeEEEEeCCCccccchHHHHHHHHHCCC--CCCCHHHHHhcCCEEEEecCCHH
Confidence 4689999999999995 54432 1222 12335677 56 88899999999999999999
Q ss_pred HHHHHHhhccccCCCCEEEEecCCCcH---HHHHhhCCC-CCceEEE-e--cCcHHhhhCCcEEEEeCCCCCHHHHHHHH
Q psy6714 189 VPVALNDIKPVFNESNLLISVAGGVPI---KNMEQALPK-NSRIIRA-M--PNTPALVRQGASVFVRGSSASDQDAQTVI 261 (303)
Q Consensus 189 v~~VL~eI~~~L~~g~IVVSiaaGV~i---e~L~~~l~~-~~~VVr~-m--Pn~p~~v~~G~til~~g~~~~~e~~e~V~ 261 (303)
..+++.++.+.++++++||++. +++. ..+.+.+.. +..++.. + |. +.. ....++++.++. + +.++
T Consensus 100 ~~~~~~~i~~~l~~~~ivv~~s-t~~p~~~~~~~~~l~~~g~~~~d~pv~g~~-~a~-~g~l~i~vgg~~---~--~~~~ 171 (317)
T 4ezb_A 100 TKAVAASAAPHLSDEAVFIDLN-SVGPDTKALAAGAIATGKGSFVEGAVMARV-PPY-AEKVPILVAGRR---A--VEVA 171 (317)
T ss_dssp HHHHHHHHGGGCCTTCEEEECC-SCCHHHHHHHHHHHHTSSCEEEEEEECSCS-TTT-GGGSEEEEESTT---H--HHHH
T ss_pred HHHHHHHHHhhcCCCCEEEECC-CCCHHHHHHHHHHHHHcCCeEEeccCCCCc-hhh-cCCEEEEEeCCh---H--HHHH
Confidence 9999999999898999998765 4544 344444432 2233321 1 22 221 223567777642 2 7899
Q ss_pred HHHHhcCCc-EEcCC
Q psy6714 262 NLFKSVGTC-EEVPE 275 (303)
Q Consensus 262 ~Lfs~iG~~-v~vdE 275 (303)
++|+.+|.. +.+.+
T Consensus 172 ~ll~~~g~~v~~~g~ 186 (317)
T 4ezb_A 172 ERLNALGMNLEAVGE 186 (317)
T ss_dssp HHHHTTTCEEEEEES
T ss_pred HHHHHhCCCeEEeCC
Confidence 999999975 55554
No 69
>1zej_A HBD-9, 3-hydroxyacyl-COA dehydrogenase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI; HET: PE8; 2.00A {Archaeoglobus fulgidus}
Probab=99.17 E-value=3.4e-10 Score=105.91 Aligned_cols=140 Identities=14% Similarity=0.170 Sum_probs=99.5
Q ss_pred CCcEEEEcCChhhHHHHHHHH---------hhcHH---HHhhC-------CCeEecChHHhhcCCCEEEEeeCCc-cHHH
Q psy6714 132 RSDKQIAGTTERGPGALIASL---------NIVSK---ATGTM-------GAKITFDNKEVTLNSEVIILAVKPH-IVPV 191 (303)
Q Consensus 132 ~mkIgIIGlG~MG~~~La~al---------~r~~e---~l~e~-------Gv~v~~d~~eav~~ADIVILAVpP~-~v~~ 191 (303)
++||||||+|.||.++ +..+ ++..+ ++.+. +++.+.+..+ +++||+||.||+.. .++.
T Consensus 12 ~~~V~vIG~G~MG~~i-A~~laaG~~V~v~d~~~~~~~~~~~~l~~~~~~~i~~~~~~~~-~~~aDlVieavpe~~~vk~ 89 (293)
T 1zej_A 12 HMKVFVIGAGLMGRGI-AIAIASKHEVVLQDVSEKALEAAREQIPEELLSKIEFTTTLEK-VKDCDIVMEAVFEDLNTKV 89 (293)
T ss_dssp CCEEEEECCSHHHHHH-HHHHHTTSEEEEECSCHHHHHHHHHHSCGGGGGGEEEESSCTT-GGGCSEEEECCCSCHHHHH
T ss_pred CCeEEEEeeCHHHHHH-HHHHHcCCEEEEEECCHHHHHHHHHHHHHHHhCCeEEeCCHHH-HcCCCEEEEcCcCCHHHHH
Confidence 5899999999999964 3322 12222 22333 6777777776 88999999999844 4454
Q ss_pred -HHHhhccccCCCCEEEEecCCCcHHHHHhhCCCCCceEEEecCcHHhhhCCcEEEEeCCCCCHHHHHHHHHHHHhcCCc
Q psy6714 192 -ALNDIKPVFNESNLLISVAGGVPIKNMEQALPKNSRIIRAMPNTPALVRQGASVFVRGSSASDQDAQTVINLFKSVGTC 270 (303)
Q Consensus 192 -VL~eI~~~L~~g~IVVSiaaGV~ie~L~~~l~~~~~VVr~mPn~p~~v~~G~til~~g~~~~~e~~e~V~~Lfs~iG~~ 270 (303)
++.++... ++++|+|.++++++..+.+.+....+++..|+.-|... .....++.+...+++.++.+.++++.+|+.
T Consensus 90 ~l~~~l~~~--~~~IlasntSti~~~~~a~~~~~~~r~~G~Hf~~Pv~~-~~lveiv~g~~t~~~~~~~~~~l~~~lGk~ 166 (293)
T 1zej_A 90 EVLREVERL--TNAPLCSNTSVISVDDIAERLDSPSRFLGVHWMNPPHV-MPLVEIVISRFTDSKTVAFVEGFLRELGKE 166 (293)
T ss_dssp HHHHHHHTT--CCSCEEECCSSSCHHHHHTTSSCGGGEEEEEECSSTTT-CCEEEEEECTTCCHHHHHHHHHHHHHTTCE
T ss_pred HHHHHHhcC--CCCEEEEECCCcCHHHHHHHhhcccceEeEEecCcccc-CCEEEEECCCCCCHHHHHHHHHHHHHcCCe
Confidence 44666654 88888888888999988886653235777776656432 234556777778999999999999999985
Q ss_pred -EEcCCC
Q psy6714 271 -EEVPEY 276 (303)
Q Consensus 271 -v~vdE~ 276 (303)
+.+.+.
T Consensus 167 ~v~v~d~ 173 (293)
T 1zej_A 167 VVVCKGQ 173 (293)
T ss_dssp EEEEESS
T ss_pred EEEeccc
Confidence 556543
No 70
>1wdk_A Fatty oxidation complex alpha subunit; alpha2BETA2 heterotetrameric complex, lyase, oxidoreductase/transferase complex, lyase; HET: ACO NAD N8E; 2.50A {Pseudomonas fragi} SCOP: a.100.1.3 a.100.1.3 c.2.1.6 c.14.1.3 PDB: 1wdl_A* 1wdm_A* 2d3t_A*
Probab=99.16 E-value=3.6e-10 Score=117.26 Aligned_cols=140 Identities=18% Similarity=0.204 Sum_probs=102.4
Q ss_pred CCcEEEEcCChhhHHHHHHHH----------hhcHHH--------------HhhCC-------------CeEecChHHhh
Q psy6714 132 RSDKQIAGTTERGPGALIASL----------NIVSKA--------------TGTMG-------------AKITFDNKEVT 174 (303)
Q Consensus 132 ~mkIgIIGlG~MG~~~La~al----------~r~~e~--------------l~e~G-------------v~v~~d~~eav 174 (303)
.|||+|||+|.||.+ ++..+ ++..+. +.+.| +..+.+. +++
T Consensus 314 i~kV~VIGaG~MG~~-iA~~la~aG~~V~l~D~~~~~~~~~~~~i~~~l~~~~~~G~~~~~~~~~~~~~i~~~~d~-~~~ 391 (715)
T 1wdk_A 314 VKQAAVLGAGIMGGG-IAYQSASKGTPILMKDINEHGIEQGLAEAAKLLVGRVDKGRMTPAKMAEVLNGIRPTLSY-GDF 391 (715)
T ss_dssp CSSEEEECCHHHHHH-HHHHHHHTTCCEEEECSSHHHHHHHHHHHHHHHHHHHTTTSSCHHHHHHHHHHEEEESSS-TTG
T ss_pred CCEEEEECCChhhHH-HHHHHHhCCCEEEEEECCHHHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHhcCeEEECCH-HHH
Confidence 578999999999995 44321 111111 22334 3455666 678
Q ss_pred cCCCEEEEeeCCcc--HHHHHHhhccccCCCCEEEEecCCCcHHHHHhhCCCCCceEEEecCcHHhhhCCcEEEEeCCCC
Q psy6714 175 LNSEVIILAVKPHI--VPVALNDIKPVFNESNLLISVAGGVPIKNMEQALPKNSRIIRAMPNTPALVRQGASVFVRGSSA 252 (303)
Q Consensus 175 ~~ADIVILAVpP~~--v~~VL~eI~~~L~~g~IVVSiaaGV~ie~L~~~l~~~~~VVr~mPn~p~~v~~G~til~~g~~~ 252 (303)
++||+||+||+.+. ..+++.++.+++++++||+|.++++++..|.+.+.....++..|+..|..... ...++.+...
T Consensus 392 ~~aDlVIeaV~e~~~vk~~v~~~l~~~~~~~~IlasntStl~i~~la~~~~~~~~~ig~hf~~P~~~~~-lvevv~g~~t 470 (715)
T 1wdk_A 392 GNVDLVVEAVVENPKVKQAVLAEVENHVREDAILASNTSTISISLLAKALKRPENFVGMHFFNPVHMMP-LVEVIRGEKS 470 (715)
T ss_dssp GGCSEEEECCCSCHHHHHHHHHHHHTTSCTTCEEEECCSSSCHHHHGGGCSCGGGEEEEECCSSTTTCC-EEEEEECSSC
T ss_pred CCCCEEEEcCCCCHHHHHHHHHHHHhhCCCCeEEEeCCCCCCHHHHHHHhcCccceEEEEccCCcccCc-eEEEEECCCC
Confidence 99999999998554 45777888888888999999889999998888775334688888877754433 3445667778
Q ss_pred CHHHHHHHHHHHHhcCCc-EEcC
Q psy6714 253 SDQDAQTVINLFKSVGTC-EEVP 274 (303)
Q Consensus 253 ~~e~~e~V~~Lfs~iG~~-v~vd 274 (303)
+++.++.+.++++.+|+. +.+.
T Consensus 471 ~~e~~~~~~~l~~~lGk~~v~v~ 493 (715)
T 1wdk_A 471 SDLAVATTVAYAKKMGKNPIVVN 493 (715)
T ss_dssp CHHHHHHHHHHHHHTTCEEEEEE
T ss_pred CHHHHHHHHHHHHHhCCEeEEEc
Confidence 999999999999999985 5554
No 71
>4gwg_A 6-phosphogluconate dehydrogenase, decarboxylating; 6-phosphoglyconate dehydrogenase, NADP, oxido; HET: MES; 1.39A {Homo sapiens} PDB: 4gwk_A* 2jkv_A* 2pgd_A 1pgo_A* 1pgp_A* 1pgq_A* 1pgn_A
Probab=99.09 E-value=3.7e-10 Score=112.48 Aligned_cols=135 Identities=18% Similarity=0.208 Sum_probs=92.0
Q ss_pred CCcEEEEcCChhhHHHHHHHH----------hhcHH---HHhhC---C--CeEecChHHhhc---CCCEEEEeeCCc-cH
Q psy6714 132 RSDKQIAGTTERGPGALIASL----------NIVSK---ATGTM---G--AKITFDNKEVTL---NSEVIILAVKPH-IV 189 (303)
Q Consensus 132 ~mkIgIIGlG~MG~~~La~al----------~r~~e---~l~e~---G--v~v~~d~~eav~---~ADIVILAVpP~-~v 189 (303)
+|+|||||+|.||.+ |+..+ +++.+ .+.+. | +..+.++.++++ ++|+||+|||+. .+
T Consensus 4 ~~kIgiIGlG~MG~~-lA~~L~~~G~~V~v~dr~~~~~~~l~~~g~~g~~i~~~~s~~e~v~~l~~aDvVil~Vp~~~~v 82 (484)
T 4gwg_A 4 QADIALIGLAVMGQN-LILNMNDHGFVVCAFNRTVSKVDDFLANEAKGTKVVGAQSLKEMVSKLKKPRRIILLVKAGQAV 82 (484)
T ss_dssp CBSEEEECCSHHHHH-HHHHHHHTTCCEEEECSSTHHHHHHHHTTTTTSSCEECSSHHHHHHTBCSSCEEEECSCSSHHH
T ss_pred CCEEEEEChhHHHHH-HHHHHHHCCCEEEEEeCCHHHHHHHHhcccCCCceeccCCHHHHHhhccCCCEEEEecCChHHH
Confidence 689999999999995 55442 22333 23332 3 344678888876 599999999984 89
Q ss_pred HHHHHhhccccCCCCEEEEecCCCcH--HHHHhhCC-CCCceEEEecCc--HHhhhCCcEEEEeCCCCCHHHHHHHHHHH
Q psy6714 190 PVALNDIKPVFNESNLLISVAGGVPI--KNMEQALP-KNSRIIRAMPNT--PALVRQGASVFVRGSSASDQDAQTVINLF 264 (303)
Q Consensus 190 ~~VL~eI~~~L~~g~IVVSiaaGV~i--e~L~~~l~-~~~~VVr~mPn~--p~~v~~G~til~~g~~~~~e~~e~V~~Lf 264 (303)
+++++++.++++++++||+..++... ..+.+.+. .+..++.+ |.. +.....|..+++.+ +++..+.++++|
T Consensus 83 ~~vl~~l~~~L~~g~iIId~st~~~~~t~~~~~~l~~~Gi~fvd~-pVsGg~~gA~~G~~im~GG---~~ea~~~v~pll 158 (484)
T 4gwg_A 83 DDFIEKLVPLLDTGDIIIDGGNSEYRDTTRRCRDLKAKGILFVGS-GVSGGEEGARYGPSLMPGG---NKEAWPHIKTIF 158 (484)
T ss_dssp HHHHHHHGGGCCTTCEEEECSCCCHHHHHHHHHHHHHTTCEEEEE-EEESHHHHHHHCCEEEEEE---CGGGHHHHHHHH
T ss_pred HHHHHHHHHhcCCCCEEEEcCCCCchHHHHHHHHHHhhccccccC-CccCCHHHHhcCCeeecCC---CHHHHHHHHHHH
Confidence 99999999999999999987766543 23333332 23344443 322 22233466666666 578899999999
Q ss_pred HhcCCcE
Q psy6714 265 KSVGTCE 271 (303)
Q Consensus 265 s~iG~~v 271 (303)
+.+|..+
T Consensus 159 ~~ig~~v 165 (484)
T 4gwg_A 159 QGIAAKV 165 (484)
T ss_dssp HHHSCBC
T ss_pred HHhcCcc
Confidence 9999754
No 72
>3g17_A Similar to 2-dehydropantoate 2-reductase; structural genomics, putative 2-dehydropantoate 2-reductase, protein structure initiative; 2.30A {Staphylococcus aureus subsp}
Probab=99.09 E-value=2.7e-11 Score=111.86 Aligned_cols=139 Identities=16% Similarity=0.147 Sum_probs=90.3
Q ss_pred CCCcEEEEcCChhhHHHHHHHHhhc----------HHHH---hhCCC---eEecChHHhh-cCCCEEEEeeCCccHHHHH
Q psy6714 131 NRSDKQIAGTTERGPGALIASLNIV----------SKAT---GTMGA---KITFDNKEVT-LNSEVIILAVKPHIVPVAL 193 (303)
Q Consensus 131 ~~mkIgIIGlG~MG~~~La~al~r~----------~e~l---~e~Gv---~v~~d~~eav-~~ADIVILAVpP~~v~~VL 193 (303)
|+|||+|||+|.||+ .++..+.+. .+.+ ...|. .+..++.+.+ +++|+||+|||++++.+++
T Consensus 1 M~mkI~iiGaGa~G~-~~a~~L~~~g~~V~~~~r~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~D~vilavk~~~~~~~l 79 (294)
T 3g17_A 1 MSLSVAIIGPGAVGT-TIAYELQQSLPHTTLIGRHAKTITYYTVPHAPAQDIVVKGYEDVTNTFDVIIIAVKTHQLDAVI 79 (294)
T ss_dssp --CCEEEECCSHHHH-HHHHHHHHHCTTCEEEESSCEEEEEESSTTSCCEEEEEEEGGGCCSCEEEEEECSCGGGHHHHG
T ss_pred CCcEEEEECCCHHHH-HHHHHHHHCCCeEEEEEeccCcEEEEecCCeeccceecCchHhcCCCCCEEEEeCCccCHHHHH
Confidence 358999999999999 566553221 1111 12342 2333455554 7899999999999999999
Q ss_pred HhhccccCCCCEEEEecCCCcHHHHHhhCCCCCceEEEecCcHH------hhhCCcEEEEeCCCCCHHHHHHHHHHHHhc
Q psy6714 194 NDIKPVFNESNLLISVAGGVPIKNMEQALPKNSRIIRAMPNTPA------LVRQGASVFVRGSSASDQDAQTVINLFKSV 267 (303)
Q Consensus 194 ~eI~~~L~~g~IVVSiaaGV~ie~L~~~l~~~~~VVr~mPn~p~------~v~~G~til~~g~~~~~e~~e~V~~Lfs~i 267 (303)
+++++++.++++|||+++|+..+.. ++. ..++..+..+.+ .+..+...+..+ +.+..+.+.++|+..
T Consensus 80 ~~l~~~l~~~~~iv~~~nGi~~~~~---~~~-~~v~~g~~~~~a~~~~pg~v~~~~~~~~~~---~~~~~~~l~~~l~~~ 152 (294)
T 3g17_A 80 PHLTYLAHEDTLIILAQNGYGQLEH---IPF-KNVCQAVVYISGQKKGDVVTHFRDYQLRIQ---DNALTRQFRDLVQDS 152 (294)
T ss_dssp GGHHHHEEEEEEEEECCSSCCCGGG---CCC-SCEEECEEEEEEEEETTEEEEEEEEEEEEE---CSHHHHHHHHHTTTS
T ss_pred HHHHHhhCCCCEEEEeccCcccHhh---CCC-CcEEEEEEEEEEEEcCCCEEEECCCEEecC---ccHHHHHHHHHHHhC
Confidence 9999988888899999999988654 664 344433322211 111111222333 345678899999999
Q ss_pred CCcEEcCCCC
Q psy6714 268 GTCEEVPEYL 277 (303)
Q Consensus 268 G~~v~vdE~~ 277 (303)
|..++++++.
T Consensus 153 ~~~~~~~~di 162 (294)
T 3g17_A 153 QIDIVLEANI 162 (294)
T ss_dssp SCEEEEESSH
T ss_pred CCceEEChHH
Confidence 9877776543
No 73
>1zcj_A Peroxisomal bifunctional enzyme; peroxisomal multifunctional enzyme type 1, L-bifunction enzyme, MFE-1, fatty acid beta oxidation; 1.90A {Rattus norvegicus}
Probab=99.07 E-value=1.6e-09 Score=106.94 Aligned_cols=109 Identities=13% Similarity=0.179 Sum_probs=82.2
Q ss_pred eEecChHHhhcCCCEEEEeeCCcc--HHHHHHhhccccCCCCEEEEecCCCcHHHHHhhCCCCCceEEEecCcHHhhhCC
Q psy6714 165 KITFDNKEVTLNSEVIILAVKPHI--VPVALNDIKPVFNESNLLISVAGGVPIKNMEQALPKNSRIIRAMPNTPALVRQG 242 (303)
Q Consensus 165 ~v~~d~~eav~~ADIVILAVpP~~--v~~VL~eI~~~L~~g~IVVSiaaGV~ie~L~~~l~~~~~VVr~mPn~p~~v~~G 242 (303)
.++.+. +.+++||+||+||+.+. ..+++.++.++++++++|+|...++++..|.+.+.....++..|+..|.... .
T Consensus 104 ~i~~~~-~~~~~aDlVIeaVpe~~~~k~~v~~~l~~~~~~~~ii~snTs~~~~~~la~~~~~~~~~ig~hf~~P~~~~-~ 181 (463)
T 1zcj_A 104 RFSSST-KELSTVDLVVEAVFEDMNLKKKVFAELSALCKPGAFLCTNTSALNVDDIASSTDRPQLVIGTHFFSPAHVM-R 181 (463)
T ss_dssp EEESCG-GGGTTCSEEEECCCSCHHHHHHHHHHHHHHSCTTCEEEECCSSSCHHHHHTTSSCGGGEEEEEECSSTTTC-C
T ss_pred hhcCCH-HHHCCCCEEEEcCCCCHHHHHHHHHHHHhhCCCCeEEEeCCCCcCHHHHHHHhcCCcceEEeecCCCcccc-e
Confidence 344555 67889999999998643 3678888888888899999988889888888877533467888776554332 2
Q ss_pred cEEEEeCCCCCHHHHHHHHHHHHhcCCc-EEcCC
Q psy6714 243 ASVFVRGSSASDQDAQTVINLFKSVGTC-EEVPE 275 (303)
Q Consensus 243 ~til~~g~~~~~e~~e~V~~Lfs~iG~~-v~vdE 275 (303)
...++.+...+++.++.+..+++.+|+. +.+.+
T Consensus 182 lvevv~g~~t~~e~~~~~~~l~~~lGk~~v~v~~ 215 (463)
T 1zcj_A 182 LLEVIPSRYSSPTTIATVMSLSKKIGKIGVVVGN 215 (463)
T ss_dssp EEEEEECSSCCHHHHHHHHHHHHHTTCEEEEBCC
T ss_pred eEEEeCCCCCCHHHHHHHHHHHHHhCCEEEEECC
Confidence 3456677778999999999999999985 55543
No 74
>2wtb_A MFP2, fatty acid multifunctional protein (ATMFP2); oxidoreductase, peroxisomes, beta-oxidation, fatty acid oxidation; 2.50A {Arabidopsis thaliana}
Probab=99.05 E-value=1.7e-09 Score=112.33 Aligned_cols=140 Identities=20% Similarity=0.210 Sum_probs=98.4
Q ss_pred CCcEEEEcCChhhHHHHHHHH----------hhcHHH--------------HhhCC-------------CeEecChHHhh
Q psy6714 132 RSDKQIAGTTERGPGALIASL----------NIVSKA--------------TGTMG-------------AKITFDNKEVT 174 (303)
Q Consensus 132 ~mkIgIIGlG~MG~~~La~al----------~r~~e~--------------l~e~G-------------v~v~~d~~eav 174 (303)
++||+|||+|.||.+ ++..+ +++.+. +.+.| +..+.+. +.+
T Consensus 312 ~~kV~VIGaG~MG~~-iA~~la~aG~~V~l~D~~~~~~~~~~~~i~~~l~~~~~~G~~~~~~~~~~~~~i~~~~d~-~~~ 389 (725)
T 2wtb_A 312 IKKVAIIGGGLMGSG-IATALILSNYPVILKEVNEKFLEAGIGRVKANLQSRVRKGSMSQEKFEKTMSLLKGSLDY-ESF 389 (725)
T ss_dssp CCCEEEECCSHHHHH-HHHHHHTTTCCEEEECSSHHHHHHHHHHHHHHHHHTTC----CTTHHHHTTTSEEEESSS-GGG
T ss_pred CcEEEEEcCCHhhHH-HHHHHHhCCCEEEEEECCHHHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHhcceEEeCCH-HHH
Confidence 678999999999995 44331 111111 11123 3455566 678
Q ss_pred cCCCEEEEeeCCcc--HHHHHHhhccccCCCCEEEEecCCCcHHHHHhhCCCCCceEEEecCcHHhhhCCcEEEEeCCCC
Q psy6714 175 LNSEVIILAVKPHI--VPVALNDIKPVFNESNLLISVAGGVPIKNMEQALPKNSRIIRAMPNTPALVRQGASVFVRGSSA 252 (303)
Q Consensus 175 ~~ADIVILAVpP~~--v~~VL~eI~~~L~~g~IVVSiaaGV~ie~L~~~l~~~~~VVr~mPn~p~~v~~G~til~~g~~~ 252 (303)
++||+||+||+.+. ..+++.++.++++++++|+|..+++++..+.+.+.....++..|+--|.... ....++.+...
T Consensus 390 ~~aDlVIeaVpe~~~vk~~v~~~l~~~~~~~~IlasntStl~i~~la~~~~~p~~~iG~hf~~P~~~~-~lvevv~g~~t 468 (725)
T 2wtb_A 390 RDVDMVIEAVIENISLKQQIFADLEKYCPQHCILASNTSTIDLNKIGERTKSQDRIVGAHFFSPAHIM-PLLEIVRTNHT 468 (725)
T ss_dssp TTCSEEEECCCSCHHHHHHHHHHHHHHSCTTCEEEECCSSSCHHHHTTTCSCTTTEEEEEECSSTTTC-CEEEEEECSSC
T ss_pred CCCCEEEEcCcCCHHHHHHHHHHHHhhCCCCcEEEeCCCCCCHHHHHHHhcCCCCEEEecCCCCcccC-ceEEEEECCCC
Confidence 99999999998664 4577788888888899988888899998888776432367777764454322 23455677778
Q ss_pred CHHHHHHHHHHHHhcCCc-EEcC
Q psy6714 253 SDQDAQTVINLFKSVGTC-EEVP 274 (303)
Q Consensus 253 ~~e~~e~V~~Lfs~iG~~-v~vd 274 (303)
+++.++.+..+++.+|+. +.+.
T Consensus 469 ~~e~~~~~~~l~~~lGk~~v~v~ 491 (725)
T 2wtb_A 469 SAQVIVDLLDVGKKIKKTPVVVG 491 (725)
T ss_dssp CHHHHHHHHHHHHHTTCEEEEEE
T ss_pred CHHHHHHHHHHHHHhCCEEEEEC
Confidence 999999999999999985 5554
No 75
>4fgw_A Glycerol-3-phosphate dehydrogenase [NAD(+)] 1; oxidoreductase; 2.45A {Saccharomyces cerevisiae}
Probab=98.98 E-value=2.8e-09 Score=103.65 Aligned_cols=114 Identities=16% Similarity=0.104 Sum_probs=82.2
Q ss_pred CCeEecChHHhhcCCCEEEEeeCCccHHHHHHhhccccCCCCEEEEecCCCcH---------HHHHhhCCCCCceEEEec
Q psy6714 163 GAKITFDNKEVTLNSEVIILAVKPHIVPVALNDIKPVFNESNLLISVAGGVPI---------KNMEQALPKNSRIIRAMP 233 (303)
Q Consensus 163 Gv~v~~d~~eav~~ADIVILAVpP~~v~~VL~eI~~~L~~g~IVVSiaaGV~i---------e~L~~~l~~~~~VVr~mP 233 (303)
++.++.|..++++++|+||++||.+.+++++++++++++++.+||+++.|+.. +.+.+.++. ...+-..|
T Consensus 104 ~i~~t~dl~~al~~ad~ii~avPs~~~r~~l~~l~~~~~~~~~iv~~~KGie~~~~~~~~~se~i~e~~~~-~~~vLsGP 182 (391)
T 4fgw_A 104 NLVANPDLIDSVKDVDIIVFNIPHQFLPRICSQLKGHVDSHVRAISCLKGFEVGAKGVQLLSSYITEELGI-QCGALSGA 182 (391)
T ss_dssp SEEEESCHHHHHTTCSEEEECSCGGGHHHHHHHHTTTSCTTCEEEECCCSCEEETTEEECHHHHHHHHHCC-EEEEEECS
T ss_pred CcEEeCCHHHHHhcCCEEEEECChhhhHHHHHHhccccCCCceeEEeccccccccccchhHHHHHHHHhCc-cceeccCC
Confidence 34567888999999999999999999999999999999999999999999862 345555553 23456789
Q ss_pred CcHHhhhCCc-EEEEeC-CC-------CCHHHHHHHHHHHHhcCCcEEcCCCC
Q psy6714 234 NTPALVRQGA-SVFVRG-SS-------ASDQDAQTVINLFKSVGTCEEVPEYL 277 (303)
Q Consensus 234 n~p~~v~~G~-til~~g-~~-------~~~e~~e~V~~Lfs~iG~~v~vdE~~ 277 (303)
+++.++..+. +.++.+ .+ .++...+.++.+|+.=-..++.+.+.
T Consensus 183 s~A~EVa~~~pta~~iA~~~~~~~~~~~~~~~a~~~~~lf~~~~frvy~s~Dv 235 (391)
T 4fgw_A 183 NIATEVAQEHWSETTVAYHIPKDFRGEGKDVDHKVLKALFHRPYFHVSVIEDV 235 (391)
T ss_dssp CCHHHHHTTCCEEEEEECCCCTTCCCSSSSCCHHHHHHHHCBTTEEEEEESCH
T ss_pred chHHHhhcCCCceEEEEecChhhhhhhhHHHHHHHHHHHhCCCCEEEEEeCCc
Confidence 9999998874 333322 11 11122466888887655555555443
No 76
>1mv8_A GMD, GDP-mannose 6-dehydrogenase; rossman fold, domain-swapped dimer, enzyme complex with COFA product, oxidoreductase; HET: SUC NAD GDX; 1.55A {Pseudomonas aeruginosa} SCOP: a.100.1.4 c.2.1.6 c.26.3.1 PDB: 1mfz_A* 1muu_A*
Probab=98.91 E-value=3.1e-09 Score=103.58 Aligned_cols=138 Identities=13% Similarity=0.075 Sum_probs=85.1
Q ss_pred CcEEEEcCChhhHHHHHHHH----------hhcHHH---Hhh-------------------CC-CeEecChHHhhcCCCE
Q psy6714 133 SDKQIAGTTERGPGALIASL----------NIVSKA---TGT-------------------MG-AKITFDNKEVTLNSEV 179 (303)
Q Consensus 133 mkIgIIGlG~MG~~~La~al----------~r~~e~---l~e-------------------~G-v~v~~d~~eav~~ADI 179 (303)
|||+|||+|.||.+ ++..+ ++..++ +.+ .| +..+.+..+++++||+
T Consensus 1 mkI~VIG~G~vG~~-~A~~la~~G~~V~~~d~~~~~~~~l~~~~~~i~e~~l~~~~~~~~~~g~l~~t~~~~~~~~~aDv 79 (436)
T 1mv8_A 1 MRISIFGLGYVGAV-CAGCLSARGHEVIGVDVSSTKIDLINQGKSPIVEPGLEALLQQGRQTGRLSGTTDFKKAVLDSDV 79 (436)
T ss_dssp CEEEEECCSTTHHH-HHHHHHHTTCEEEEECSCHHHHHHHHTTCCSSCCTTHHHHHHHHHHTTCEEEESCHHHHHHTCSE
T ss_pred CEEEEECCCHHHHH-HHHHHHHCCCEEEEEECCHHHHHHHhCCCCCcCCCCHHHHHHhhcccCceEEeCCHHHHhccCCE
Confidence 79999999999994 44432 122222 222 34 5666788888999999
Q ss_pred EEEeeC-Ccc---------HHHHHHhhccccCC---CCEEEEec-CCCc--HHHHHhhCCC--CC-----ceEEEecCcH
Q psy6714 180 IILAVK-PHI---------VPVALNDIKPVFNE---SNLLISVA-GGVP--IKNMEQALPK--NS-----RIIRAMPNTP 236 (303)
Q Consensus 180 VILAVp-P~~---------v~~VL~eI~~~L~~---g~IVVSia-aGV~--ie~L~~~l~~--~~-----~VVr~mPn~p 236 (303)
||+||| |.. +.++++++.+++++ +++||..+ .++. .+.+.+.+.. +. ..+.+.|...
T Consensus 80 viiaVptp~~~~~~~dl~~v~~v~~~i~~~l~~~~~~~iVV~~Stv~~g~t~~~l~~~l~~~~g~~~~~~~~v~~~Pe~~ 159 (436)
T 1mv8_A 80 SFICVGTPSKKNGDLDLGYIETVCREIGFAIREKSERHTVVVRSTVLPGTVNNVVIPLIEDCSGKKAGVDFGVGTNPEFL 159 (436)
T ss_dssp EEECCCCCBCTTSSBCCHHHHHHHHHHHHHHTTCCSCCEEEECSCCCTTHHHHTHHHHHHHHHSCCBTTTBEEEECCCCC
T ss_pred EEEEcCCCcccCCCcchHHHHHHHHHHHHHhcccCCCcEEEEeCCcCCCchHHHHHHHHHHhcCcccCCcEEEEECcccc
Confidence 999997 454 99999999888887 88888542 1222 3334443321 01 1233334322
Q ss_pred Hh------hhCCcEEEEeCCCCCHHHHHHHHHHHHhcCCcEEc
Q psy6714 237 AL------VRQGASVFVRGSSASDQDAQTVINLFKSVGTCEEV 273 (303)
Q Consensus 237 ~~------v~~G~til~~g~~~~~e~~e~V~~Lfs~iG~~v~v 273 (303)
.. ......++..+. +++..+.+.++|+.+|..+.+
T Consensus 160 ~~G~~~~~~~~~~~iv~G~~--~~~~~~~~~~l~~~~~~~v~~ 200 (436)
T 1mv8_A 160 RESTAIKDYDFPPMTVIGEL--DKQTGDLLEEIYRELDAPIIR 200 (436)
T ss_dssp CTTSHHHHHHSCSCEEEEES--SHHHHHHHHHHHTTSSSCEEE
T ss_pred cccccchhccCCCEEEEEcC--CHHHHHHHHHHHhccCCCEEc
Confidence 11 011112334332 578889999999999986655
No 77
>3gg2_A Sugar dehydrogenase, UDP-glucose/GDP-mannose dehydrogenase family; structural genomics, oxidoreductase, PSI-2; HET: UGA; 1.70A {Porphyromonas gingivalis}
Probab=98.82 E-value=1.3e-08 Score=100.32 Aligned_cols=134 Identities=16% Similarity=0.164 Sum_probs=85.8
Q ss_pred CCcEEEEcCChhhHHHHHHHH----------hhcHHH---Hhh-------------------C-CCeEecChHHhhcCCC
Q psy6714 132 RSDKQIAGTTERGPGALIASL----------NIVSKA---TGT-------------------M-GAKITFDNKEVTLNSE 178 (303)
Q Consensus 132 ~mkIgIIGlG~MG~~~La~al----------~r~~e~---l~e-------------------~-Gv~v~~d~~eav~~AD 178 (303)
+|||+|||+|.||.+ ++..+ +++.++ +.+ . ++..+++..+++++||
T Consensus 2 ~mkI~VIG~G~vG~~-lA~~La~~G~~V~~~D~~~~~v~~l~~g~~~i~e~gl~~~l~~~~~~~~l~~t~d~~ea~~~aD 80 (450)
T 3gg2_A 2 SLDIAVVGIGYVGLV-SATCFAELGANVRCIDTDRNKIEQLNSGTIPIYEPGLEKMIARNVKAGRLRFGTEIEQAVPEAD 80 (450)
T ss_dssp CCEEEEECCSHHHHH-HHHHHHHTTCEEEEECSCHHHHHHHHHTCSCCCSTTHHHHHHHHHHTTSEEEESCHHHHGGGCS
T ss_pred CCEEEEECcCHHHHH-HHHHHHhcCCEEEEEECCHHHHHHHHcCCCcccCCCHHHHHHhhcccCcEEEECCHHHHHhcCC
Confidence 489999999999995 44332 122221 111 2 2566788888899999
Q ss_pred EEEEeeCCc----------cHHHHHHhhccccCCCCEEEEecCCCcH---HHHHhhC----CC---CC-ceEEEecCcHH
Q psy6714 179 VIILAVKPH----------IVPVALNDIKPVFNESNLLISVAGGVPI---KNMEQAL----PK---NS-RIIRAMPNTPA 237 (303)
Q Consensus 179 IVILAVpP~----------~v~~VL~eI~~~L~~g~IVVSiaaGV~i---e~L~~~l----~~---~~-~VVr~mPn~p~ 237 (303)
+||+|||.. .+.+++++|.++++++++||..+ .+.. +.+.+.+ +. .. ..+.+-|....
T Consensus 81 vViiaVptp~~~~~~~dl~~v~~v~~~i~~~l~~g~iVV~~S-Tv~pgt~~~l~~~l~~~~~~~~~~~d~~v~~~Pe~a~ 159 (450)
T 3gg2_A 81 IIFIAVGTPAGEDGSADMSYVLDAARSIGRAMSRYILIVTKS-TVPVGSYRLIRKAIQEELDKREVLIDFDIASNPEFLK 159 (450)
T ss_dssp EEEECCCCCBCTTSSBCCHHHHHHHHHHHHHCCSCEEEEECS-CCCTTHHHHHHHHHHHHHHHTTCCCCEEEEECCCCCC
T ss_pred EEEEEcCCCcccCCCcChHHHHHHHHHHHhhCCCCCEEEEee-eCCCcchHHHHHHHHHhccccCcCcceeEEechhhhc
Confidence 999999865 79999999999998998888554 3443 2332222 10 01 23444455332
Q ss_pred hh------hCCcEEEEeCCCCCHHHHHHHHHHHHhcCC
Q psy6714 238 LV------RQGASVFVRGSSASDQDAQTVINLFKSVGT 269 (303)
Q Consensus 238 ~v------~~G~til~~g~~~~~e~~e~V~~Lfs~iG~ 269 (303)
+. ..-..+++.+. +++..+.++.+|+.++.
T Consensus 160 eG~~~~~~~~p~~ivvG~~--~~~~~~~~~~l~~~~~~ 195 (450)
T 3gg2_A 160 EGNAIDDFMKPDRVVVGVD--SDRARELITSLYKPMLL 195 (450)
T ss_dssp TTSHHHHHHSCSCEEEEES--SHHHHHHHHHHHTTTCC
T ss_pred ccchhhhccCCCEEEEEcC--CHHHHHHHHHHHHHHhc
Confidence 11 11113444443 67889999999999986
No 78
>3pid_A UDP-glucose 6-dehydrogenase; rossmann fold, oxidoreductase; 1.40A {Klebsiella pneumoniae} PDB: 3pln_A* 3pjg_A* 3phl_A* 3plr_A*
Probab=98.79 E-value=1.5e-08 Score=99.66 Aligned_cols=126 Identities=18% Similarity=0.296 Sum_probs=81.9
Q ss_pred cCCCcEEEEcCChhhHHHHHHHH---------hhcHHH---Hhh------------------CCCeEecChHHhhcCCCE
Q psy6714 130 WNRSDKQIAGTTERGPGALIASL---------NIVSKA---TGT------------------MGAKITFDNKEVTLNSEV 179 (303)
Q Consensus 130 ~~~mkIgIIGlG~MG~~~La~al---------~r~~e~---l~e------------------~Gv~v~~d~~eav~~ADI 179 (303)
+.+|||+|||+|.||.+ ++..+ ++..++ +.+ .++..++|..+++++||+
T Consensus 34 ~~~mkIaVIGlG~mG~~-lA~~La~G~~V~~~D~~~~~v~~l~~g~~~i~e~~l~~ll~~~~~~l~~ttd~~ea~~~aDv 112 (432)
T 3pid_A 34 SEFMKITISGTGYVGLS-NGVLIAQNHEVVALDIVQAKVDMLNQKISPIVDKEIQEYLAEKPLNFRATTDKHDAYRNADY 112 (432)
T ss_dssp -CCCEEEEECCSHHHHH-HHHHHHTTSEEEEECSCHHHHHHHHTTCCSSCCHHHHHHHHHSCCCEEEESCHHHHHTTCSE
T ss_pred cCCCEEEEECcCHHHHH-HHHHHHcCCeEEEEecCHHHhhHHhccCCccccccHHHHHhhccCCeEEEcCHHHHHhCCCE
Confidence 56799999999999995 44332 122221 111 146677888899999999
Q ss_pred EEEeeCCc-----------cHHHHHHhhccccCCCCEEEEecCCCc---HHHHHhhCCCCCceEEEecCcHHhhhCC---
Q psy6714 180 IILAVKPH-----------IVPVALNDIKPVFNESNLLISVAGGVP---IKNMEQALPKNSRIIRAMPNTPALVRQG--- 242 (303)
Q Consensus 180 VILAVpP~-----------~v~~VL~eI~~~L~~g~IVVSiaaGV~---ie~L~~~l~~~~~VVr~mPn~p~~v~~G--- 242 (303)
||+|||.. .+++++++|.+ ++++++||. .+.+. .+.+.+.+.. ..+.+-|.. .+.|
T Consensus 113 ViiaVPt~~~~~~~~~Dl~~V~~v~~~i~~-l~~g~iVV~-~STv~pgtt~~l~~~l~~--~~v~~sPe~---~~~G~A~ 185 (432)
T 3pid_A 113 VIIATPTDYDPKTNYFNTSTVEAVIRDVTE-INPNAVMII-KSTIPVGFTRDIKERLGI--DNVIFSPEF---LREGRAL 185 (432)
T ss_dssp EEECCCCEEETTTTEEECHHHHHHHHHHHH-HCTTSEEEE-CSCCCTTHHHHHHHHHTC--CCEEECCCC---CCTTSHH
T ss_pred EEEeCCCccccccccccHHHHHHHHHHHHh-cCCCcEEEE-eCCCChHHHHHHHHHHhh--ccEeecCcc---CCcchhh
Confidence 99999854 58889999988 889998883 33343 4556666653 233343332 2222
Q ss_pred ------cEEEEeCCCCCHHHHHHHHHHHHh
Q psy6714 243 ------ASVFVRGSSASDQDAQTVINLFKS 266 (303)
Q Consensus 243 ------~til~~g~~~~~e~~e~V~~Lfs~ 266 (303)
..+++.+ +++..+.+..+|..
T Consensus 186 ~~~l~p~rIvvG~---~~~~~~~~~~ll~~ 212 (432)
T 3pid_A 186 YDNLHPSRIVIGE---RSARAERFADLLKE 212 (432)
T ss_dssp HHHHSCSCEEESS---CSHHHHHHHHHHHH
T ss_pred hcccCCceEEecC---CHHHHHHHHHHHHh
Confidence 1355554 45667889999987
No 79
>2q3e_A UDP-glucose 6-dehydrogenase; hexamer, structural genomics, S genomics consortium, SGC, oxidoreductase; HET: NAD UPG; 2.00A {Homo sapiens} PDB: 2qg4_A* 3khu_A* 3itk_A* 3tdk_A* 3ptz_A* 3prj_A* 3tf5_A
Probab=98.71 E-value=1.8e-08 Score=99.21 Aligned_cols=139 Identities=9% Similarity=0.164 Sum_probs=83.9
Q ss_pred CCcEEEEcCChhhHHHHHHHH-h-----------hcHHHHhh----------------------CCCeEecChHHhhcCC
Q psy6714 132 RSDKQIAGTTERGPGALIASL-N-----------IVSKATGT----------------------MGAKITFDNKEVTLNS 177 (303)
Q Consensus 132 ~mkIgIIGlG~MG~~~La~al-~-----------r~~e~l~e----------------------~Gv~v~~d~~eav~~A 177 (303)
+|||+|||+|.||.+ ++..+ + ++.+++.. .++..+++..+++++|
T Consensus 5 ~mkI~VIG~G~mG~~-lA~~La~~g~G~~V~~~d~~~~~~~~l~~g~~~i~e~~l~~~~~~~~~~~~~~t~~~~e~~~~a 83 (467)
T 2q3e_A 5 IKKICCIGAGYVGGP-TCSVIAHMCPEIRVTVVDVNESRINAWNSPTLPIYEPGLKEVVESCRGKNLFFSTNIDDAIKEA 83 (467)
T ss_dssp CCEEEEECCSTTHHH-HHHHHHHHCTTSEEEEECSCHHHHHHHTSSSCSSCCTTHHHHHHHHBTTTEEEESCHHHHHHHC
T ss_pred ccEEEEECCCHHHHH-HHHHHHhcCCCCEEEEEECCHHHHHHHhCCCCCcCCCCHHHHHHHhhcCCEEEECCHHHHHhcC
Confidence 689999999999995 43321 1 12222211 3566667888889999
Q ss_pred CEEEEeeC-Ccc--------------HHHHHHhhccccCCCCEEEEecC-CC-cHHHHHhhCCCC----Cc-eEEEecCc
Q psy6714 178 EVIILAVK-PHI--------------VPVALNDIKPVFNESNLLISVAG-GV-PIKNMEQALPKN----SR-IIRAMPNT 235 (303)
Q Consensus 178 DIVILAVp-P~~--------------v~~VL~eI~~~L~~g~IVVSiaa-GV-~ie~L~~~l~~~----~~-VVr~mPn~ 235 (303)
|+||+||| |.. +.++++++.++++++++||..+. ++ +.+.+.+.+... .. .+.+.|.
T Consensus 84 DvViiaVptp~~~~~v~~~~~~dl~~v~~~~~~i~~~l~~g~iVV~~STv~~g~~~~l~~~l~~~~~~~~d~~V~~~Pe- 162 (467)
T 2q3e_A 84 DLVFISVNTPTKTYGMGKGRAADLKYIEACARRIVQNSNGYKIVTEKSTVPVRAAESIRRIFDANTKPNLNLQVLSNPE- 162 (467)
T ss_dssp SEEEECCCCCBCCSSTTTTTSBCCHHHHHHHHHHHHTCCSEEEEEECSCCCTTHHHHHHHHHHHTCCTTCEEEEEECCC-
T ss_pred CEEEEEcCCchhhccccccCCCcHHHHHHHHHHHHhhCCCCCEEEECCcCCchHHHHHHHHHHHhCCCCCCeEEEeCHH-
Confidence 99999996 443 57788888888888888874321 22 233454443211 11 1223333
Q ss_pred HHhhhCCcE---------EEEeCCC--CCHHHHHHHHHHHHhc-CC-cEEcC
Q psy6714 236 PALVRQGAS---------VFVRGSS--ASDQDAQTVINLFKSV-GT-CEEVP 274 (303)
Q Consensus 236 p~~v~~G~t---------il~~g~~--~~~e~~e~V~~Lfs~i-G~-~v~vd 274 (303)
....|.. +++.+.. .+++..+.++++|+.+ |. .+.+.
T Consensus 163 --~~~~G~~~~d~~~~~rivvGg~~~~~~~~~~~~~~~l~~~~~g~~~~~~~ 212 (467)
T 2q3e_A 163 --FLAEGTAIKDLKNPDRVLIGGDETPEGQRAVQALCAVYEHWVPREKILTT 212 (467)
T ss_dssp --CCCTTSHHHHHHSCSCEEEECCSSHHHHHHHHHHHHHHTTTSCGGGEEEE
T ss_pred --HhhcccchhhccCCCEEEECCCCCCCCHHHHHHHHHHHHHhccCCeEEec
Confidence 2223322 4444422 2577889999999999 74 45553
No 80
>1ygy_A PGDH, D-3-phosphoglycerate dehydrogenase; oxidoreductase, serine biosy structural genomics, PSI, protein structure initiative; HET: TAR; 2.30A {Mycobacterium tuberculosis} SCOP: c.2.1.4 c.23.12.1 d.58.18.1 d.81.2.2 PDB: 3dc2_A* 3ddn_A*
Probab=98.69 E-value=2.3e-08 Score=100.22 Aligned_cols=150 Identities=7% Similarity=0.119 Sum_probs=98.5
Q ss_pred cCCCcEEEEcCChhhHHHHHHHHhh------------cHHHHhhCCCeEecChHHhhcCCCEEEEeeCCc-cHHHHHHh-
Q psy6714 130 WNRSDKQIAGTTERGPGALIASLNI------------VSKATGTMGAKITFDNKEVTLNSEVIILAVKPH-IVPVALND- 195 (303)
Q Consensus 130 ~~~mkIgIIGlG~MG~~~La~al~r------------~~e~l~e~Gv~v~~d~~eav~~ADIVILAVpP~-~v~~VL~e- 195 (303)
+..++|||||+|+||+ .++..+.. ..+.+.+.|+... +..+++++||+|++|+|+. .+..++.+
T Consensus 140 l~g~~vgIIG~G~IG~-~vA~~l~~~G~~V~~~d~~~~~~~a~~~g~~~~-~l~e~~~~aDvV~l~~P~~~~t~~~i~~~ 217 (529)
T 1ygy_A 140 IFGKTVGVVGLGRIGQ-LVAQRIAAFGAYVVAYDPYVSPARAAQLGIELL-SLDDLLARADFISVHLPKTPETAGLIDKE 217 (529)
T ss_dssp CTTCEEEEECCSHHHH-HHHHHHHTTTCEEEEECTTSCHHHHHHHTCEEC-CHHHHHHHCSEEEECCCCSTTTTTCBCHH
T ss_pred cCCCEEEEEeeCHHHH-HHHHHHHhCCCEEEEECCCCChhHHHhcCcEEc-CHHHHHhcCCEEEECCCCchHHHHHhCHH
Confidence 4468999999999999 57665421 1234456788764 7888999999999999977 77777754
Q ss_pred hccccCCCCEEEEecCCCc--HHHHHhhCCCCCce----EEEecCcHH----hhhCCcEEEEeCCC-CCHHHHHH-----
Q psy6714 196 IKPVFNESNLLISVAGGVP--IKNMEQALPKNSRI----IRAMPNTPA----LVRQGASVFVRGSS-ASDQDAQT----- 259 (303)
Q Consensus 196 I~~~L~~g~IVVSiaaGV~--ie~L~~~l~~~~~V----Vr~mPn~p~----~v~~G~til~~g~~-~~~e~~e~----- 259 (303)
+.+.++++.+||++..|-. ...|.+.+..+ .+ +.+++.+|. .+.....++++... .+.+..+.
T Consensus 218 ~~~~~k~g~ilin~arg~iv~~~aL~~al~~g-~i~ga~lDv~~~eP~~~~~L~~~~~vilTPh~~~~t~ea~~~~~~~~ 296 (529)
T 1ygy_A 218 ALAKTKPGVIIVNAARGGLVDEAALADAITGG-HVRAAGLDVFATEPCTDSPLFELAQVVVTPHLGASTAEAQDRAGTDV 296 (529)
T ss_dssp HHTTSCTTEEEEECSCTTSBCHHHHHHHHHTS-SEEEEEESSCSSSSCSCCGGGGCTTEEECSSCSSCBHHHHHHHHHHH
T ss_pred HHhCCCCCCEEEECCCCchhhHHHHHHHHHcC-CccEEEEeeccCCCCCCchHHhCCCEEEccccCCCCHHHHHHHHHHH
Confidence 5566888999998876543 34566666431 11 223344442 22334567776544 46666553
Q ss_pred HHHHHHhcCC-c----EEcC-CCCchhhh
Q psy6714 260 VINLFKSVGT-C----EEVP-EYLLDGIT 282 (303)
Q Consensus 260 V~~Lfs~iG~-~----v~vd-E~~~Da~t 282 (303)
++.+...++. . +.++ .++||.+.
T Consensus 297 ~~~l~~~l~~~~~~~~v~~~~~~~hd~i~ 325 (529)
T 1ygy_A 297 AESVRLALAGEFVPDAVNVGGGVVNEEVA 325 (529)
T ss_dssp HHHHHHHHTTCCCTTBCSCCSTTSCTTTT
T ss_pred HHHHHHHHcCCCCCcccCCcccccchhhh
Confidence 6677777763 2 5567 68888876
No 81
>1bg6_A N-(1-D-carboxylethyl)-L-norvaline dehydrogenase; L) stereospecific opine dehydrogenase, oxidoreductase; 1.80A {Arthrobacter SP} SCOP: a.100.1.5 c.2.1.6
Probab=98.67 E-value=6.5e-08 Score=90.11 Aligned_cols=86 Identities=19% Similarity=0.176 Sum_probs=62.2
Q ss_pred CCcEEEEcCChhhHHHHHHHHh----------hcHH---HHhhC-CC--------------eEecChHHhhcCCCEEEEe
Q psy6714 132 RSDKQIAGTTERGPGALIASLN----------IVSK---ATGTM-GA--------------KITFDNKEVTLNSEVIILA 183 (303)
Q Consensus 132 ~mkIgIIGlG~MG~~~La~al~----------r~~e---~l~e~-Gv--------------~v~~d~~eav~~ADIVILA 183 (303)
+|||+|||+|.||. .++..+. +..+ .+.+. |+ ....+..++++++|+||+|
T Consensus 4 ~mki~iiG~G~~G~-~~a~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~vi~~ 82 (359)
T 1bg6_A 4 SKTYAVLGLGNGGH-AFAAYLALKGQSVLAWDIDAQRIKEIQDRGAIIAEGPGLAGTAHPDLLTSDIGLAVKDADVILIV 82 (359)
T ss_dssp CCEEEEECCSHHHH-HHHHHHHHTTCEEEEECSCHHHHHHHHHHTSEEEESSSCCEEECCSEEESCHHHHHTTCSEEEEC
T ss_pred cCeEEEECCCHHHH-HHHHHHHhCCCEEEEEeCCHHHHHHHHhcCCeEEeccccccccccceecCCHHHHHhcCCEEEEe
Confidence 47999999999999 4554421 2222 23332 32 2456777888899999999
Q ss_pred eCCccHHHHHHhhccccCCCCEEEEecC-CCcHHHH
Q psy6714 184 VKPHIVPVALNDIKPVFNESNLLISVAG-GVPIKNM 218 (303)
Q Consensus 184 VpP~~v~~VL~eI~~~L~~g~IVVSiaa-GV~ie~L 218 (303)
||+....++++++.+.++++++||++.+ ++....+
T Consensus 83 v~~~~~~~~~~~l~~~l~~~~~vv~~~~~~~~~~~~ 118 (359)
T 1bg6_A 83 VPAIHHASIAANIASYISEGQLIILNPGATGGALEF 118 (359)
T ss_dssp SCGGGHHHHHHHHGGGCCTTCEEEESSCCSSHHHHH
T ss_pred CCchHHHHHHHHHHHhCCCCCEEEEcCCCchHHHHH
Confidence 9999999999999998988999998854 3343333
No 82
>3c7a_A Octopine dehydrogenase; L) stereospecific opine dehydrogenas, oxidorecutase, oxidoreductase; HET: NAD; 2.10A {Pecten maximus} PDB: 3c7c_B* 3c7d_B* 3iqd_B*
Probab=98.66 E-value=3.9e-08 Score=94.16 Aligned_cols=82 Identities=16% Similarity=0.177 Sum_probs=60.8
Q ss_pred CCcEEEEcCChhhHHHHHHHH-----------h---hcHHH----HhhCC------------C-------eEecChHHhh
Q psy6714 132 RSDKQIAGTTERGPGALIASL-----------N---IVSKA----TGTMG------------A-------KITFDNKEVT 174 (303)
Q Consensus 132 ~mkIgIIGlG~MG~~~La~al-----------~---r~~e~----l~e~G------------v-------~v~~d~~eav 174 (303)
+|||+|||+|.||+ .++..+ . +..++ +.+.| . .++.++.+++
T Consensus 2 ~mkI~ViGaG~~G~-~~a~~La~~~G~~V~~~~~~~r~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~ 80 (404)
T 3c7a_A 2 TVKVCVCGGGNGAH-TLSGLAASRDGVEVRVLTLFADEAERWTKALGADELTVIVNEKDGTQTEVKSRPKVITKDPEIAI 80 (404)
T ss_dssp CEEEEEECCSHHHH-HHHHHHTTSTTEEEEEECCSTTHHHHHHHHHTTSCEEEEEECSSSCEEEEEECCSEEESCHHHHH
T ss_pred CceEEEECCCHHHH-HHHHHHHhCCCCEEEEEeCCCCcHHHHHHHHhhccceeeeecCCCccceeeccceEEeCCHHHHh
Confidence 58999999999999 455443 1 22222 22222 1 1445677888
Q ss_pred cCCCEEEEeeCCccHHHHHHhhccccCCCCEEEEecCCCc
Q psy6714 175 LNSEVIILAVKPHIVPVALNDIKPVFNESNLLISVAGGVP 214 (303)
Q Consensus 175 ~~ADIVILAVpP~~v~~VL~eI~~~L~~g~IVVSiaaGV~ 214 (303)
+++|+||+|||++.+.++++++.++++++++||++.++..
T Consensus 81 ~~aD~Vilav~~~~~~~v~~~l~~~l~~~~ivv~~~~~~G 120 (404)
T 3c7a_A 81 SGADVVILTVPAFAHEGYFQAMAPYVQDSALIVGLPSQAG 120 (404)
T ss_dssp TTCSEEEECSCGGGHHHHHHHHTTTCCTTCEEEETTCCTT
T ss_pred CCCCEEEEeCchHHHHHHHHHHHhhCCCCcEEEEcCCCcc
Confidence 8999999999999999999999999988999998655444
No 83
>1dlj_A UDP-glucose dehydrogenase; rossmann fold, ternary complex, crystallographic dimer, oxidoreductase; HET: NAI UGA; 1.80A {Streptococcus pyogenes} SCOP: a.100.1.4 c.2.1.6 c.26.3.1 PDB: 1dli_A*
Probab=98.65 E-value=7.8e-08 Score=93.01 Aligned_cols=131 Identities=22% Similarity=0.213 Sum_probs=80.2
Q ss_pred CcEEEEcCChhhHHHHHHHHh---------hcHHH---HhhCCC------------------eEecChHHhhcCCCEEEE
Q psy6714 133 SDKQIAGTTERGPGALIASLN---------IVSKA---TGTMGA------------------KITFDNKEVTLNSEVIIL 182 (303)
Q Consensus 133 mkIgIIGlG~MG~~~La~al~---------r~~e~---l~e~Gv------------------~v~~d~~eav~~ADIVIL 182 (303)
|||+|||+|.||.+ ++..+- +..++ +.+.|. ..+.+..+++++||+||+
T Consensus 1 MkI~VIG~G~vG~~-~A~~La~G~~V~~~d~~~~~~~~l~~~~~~i~e~~l~~~~~~~~~~l~~t~~~~~~~~~aDvvii 79 (402)
T 1dlj_A 1 MKIAVAGSGYVGLS-LGVLLSLQNEVTIVDILPSKVDKINNGLSPIQDEYIEYYLKSKQLSIKATLDSKAAYKEAELVII 79 (402)
T ss_dssp CEEEEECCSHHHHH-HHHHHTTTSEEEEECSCHHHHHHHHTTCCSSCCHHHHHHHHHSCCCEEEESCHHHHHHHCSEEEE
T ss_pred CEEEEECCCHHHHH-HHHHHhCCCEEEEEECCHHHHHHHHcCCCCcCCCCHHHHHHhccCcEEEeCCHHHHhcCCCEEEE
Confidence 78999999999995 554431 22222 222232 455667788889999999
Q ss_pred eeCCc-----------cHHHHHHhhccccCCCCEEEE--ecCCCcHHHHHhhCCCCCceEEEecCcHHhh------hCCc
Q psy6714 183 AVKPH-----------IVPVALNDIKPVFNESNLLIS--VAGGVPIKNMEQALPKNSRIIRAMPNTPALV------RQGA 243 (303)
Q Consensus 183 AVpP~-----------~v~~VL~eI~~~L~~g~IVVS--iaaGV~ie~L~~~l~~~~~VVr~mPn~p~~v------~~G~ 243 (303)
|||+. .+.++++++.+ ++++++||. +...-..+.+.+.++.. . +...|...... ...-
T Consensus 80 avpt~~~~~~~~~dl~~v~~v~~~i~~-l~~~~iVV~~ST~~~g~~~~l~~~~~~~-~-v~~~Pe~~~~G~a~~~~~~~~ 156 (402)
T 1dlj_A 80 ATPTNYNSRINYFDTQHVETVIKEVLS-VNSHATLIIKSTIPIGFITEMRQKFQTD-R-IIFSPEFLRESKALYDNLYPS 156 (402)
T ss_dssp CCCCCEETTTTEECCHHHHHHHHHHHH-HCSSCEEEECSCCCTTHHHHHHHHTTCS-C-EEECCCCCCTTSTTHHHHSCS
T ss_pred ecCCCcccCCCCccHHHHHHHHHHHHh-hCCCCEEEEeCCCCccHHHHHHHHhCCC-e-EEECCccccCcchhhcccCCC
Confidence 99976 59999999988 888888884 33333456777777643 3 33334321100 0111
Q ss_pred EEEEeCCCCC----HHHHHHHHHHHHhc
Q psy6714 244 SVFVRGSSAS----DQDAQTVINLFKSV 267 (303)
Q Consensus 244 til~~g~~~~----~e~~e~V~~Lfs~i 267 (303)
.++..+.... .+..+.+.++|...
T Consensus 157 riviG~~~~~~~~~~~~~~~~~~~l~~~ 184 (402)
T 1dlj_A 157 RIIVSCEENDSPKVKADAEKFALLLKSA 184 (402)
T ss_dssp CEEEECCTTSCHHHHHHHHHHHHHHHHH
T ss_pred EEEEeCCCcccchhHHHHHHHHHHHhhh
Confidence 1444443211 15567788888763
No 84
>2o3j_A UDP-glucose 6-dehydrogenase; structural genomics, PSI-2, prote structure initiative, NEW YORK SGX research center for STRU genomics; 1.88A {Caenorhabditis elegans}
Probab=98.62 E-value=1.1e-07 Score=94.06 Aligned_cols=140 Identities=14% Similarity=0.136 Sum_probs=82.8
Q ss_pred CCcEEEEcCChhhHHHHHHHH-h-----------hcHHH---Hhh-------------------CCCeEecChHHhhcCC
Q psy6714 132 RSDKQIAGTTERGPGALIASL-N-----------IVSKA---TGT-------------------MGAKITFDNKEVTLNS 177 (303)
Q Consensus 132 ~mkIgIIGlG~MG~~~La~al-~-----------r~~e~---l~e-------------------~Gv~v~~d~~eav~~A 177 (303)
+|||+|||+|.||.+ ++..+ + ++.++ +.+ .++..+++..+++++|
T Consensus 9 ~mkI~VIG~G~vG~~-~A~~La~~g~g~~V~~~D~~~~~v~~l~~g~~~i~e~gl~~~~~~~~~~~l~~t~~~~~~~~~a 87 (481)
T 2o3j_A 9 VSKVVCVGAGYVGGP-TCAMIAHKCPHITVTVVDMNTAKIAEWNSDKLPIYEPGLDEIVFAARGRNLFFSSDIPKAIAEA 87 (481)
T ss_dssp CCEEEEECCSTTHHH-HHHHHHHHCTTSEEEEECSCHHHHHHHTSSSCSSCCTTHHHHHHHHBTTTEEEESCHHHHHHHC
T ss_pred CCEEEEECCCHHHHH-HHHHHHhcCCCCEEEEEECCHHHHHHHHCCCCCcCCCCHHHHHHHhhcCCEEEECCHHHHhhcC
Confidence 689999999999995 44322 1 12222 211 1345566777888999
Q ss_pred CEEEEeeC-Cc--------------cHHHHHHhhccccCCCCEEEEecCCCc---HHHHHhhCCC--C----C-ceEEEe
Q psy6714 178 EVIILAVK-PH--------------IVPVALNDIKPVFNESNLLISVAGGVP---IKNMEQALPK--N----S-RIIRAM 232 (303)
Q Consensus 178 DIVILAVp-P~--------------~v~~VL~eI~~~L~~g~IVVSiaaGV~---ie~L~~~l~~--~----~-~VVr~m 232 (303)
|+||+||| |. .+.+++++|.++++++++||..+ .+. .+.+.+.+.. + . -.+...
T Consensus 88 Dvvii~Vptp~~~~g~~~~~~~dl~~v~~~~~~i~~~l~~g~iVV~~S-Tv~~gt~~~l~~~l~~~~~~~~~~d~~v~~~ 166 (481)
T 2o3j_A 88 DLIFISVNTPTKMYGRGKGMAPDLKYVESVSRTIAQYAGGPKIVVEKS-TVPVKAAESIGCILREAQKNNENLKFQVLSN 166 (481)
T ss_dssp SEEEECCCCCBCCSSTTTTTSBCCHHHHHHHHHHHHHCCSCEEEEECS-CCCTTHHHHHHHHHHHHTC----CCEEEEEC
T ss_pred CEEEEecCCccccccccccCCCcHHHHHHHHHHHHHhCCCCCEEEECC-CCCCCHHHHHHHHHHHhhCcCcCCceEEEeC
Confidence 99999996 33 28899999999898898888432 232 2334443321 1 1 124444
Q ss_pred cCcHHhh------hCCcEEEEeCCCC--CHHHHHHHHHHHHhcCC--cEEc
Q psy6714 233 PNTPALV------RQGASVFVRGSSA--SDQDAQTVINLFKSVGT--CEEV 273 (303)
Q Consensus 233 Pn~p~~v------~~G~til~~g~~~--~~e~~e~V~~Lfs~iG~--~v~v 273 (303)
|...... .....+++.+... .++..+.++++|+.+|. .+.+
T Consensus 167 Pe~~~~G~a~~~~~~~~~iviG~~~~~~~~~a~~~l~~l~~~~~~~~~~~~ 217 (481)
T 2o3j_A 167 PEFLAEGTAMKDLANPDRVLIGGESSPEGLQAVAELVRIYENWVPRNRIIT 217 (481)
T ss_dssp CCCCCTTCHHHHHHSCSCEEEEECSSHHHHHHHHHHHHHHHTTSCGGGEEE
T ss_pred cccccccchhhcccCCCEEEEEecCchhhHHHHHHHHHHHHhhcCCCeEEe
Confidence 5422111 1111344444321 12577899999999985 4544
No 85
>3ado_A Lambda-crystallin; L-gulonate 3-dehydrogenase, structural genomics, riken struc genomics/proteomics initiative, RSGI, acetylation; 1.70A {Oryctolagus cuniculus} PDB: 3adp_A* 3f3s_A*
Probab=98.61 E-value=6.5e-07 Score=84.70 Aligned_cols=108 Identities=14% Similarity=0.107 Sum_probs=84.2
Q ss_pred eEecChHHhhcCCCEEEEeeC-CccH-HHHHHhhccccCCCCEEEEecCCCcHHHHHhhCCCCCceEEEecCcHHhhhCC
Q psy6714 165 KITFDNKEVTLNSEVIILAVK-PHIV-PVALNDIKPVFNESNLLISVAGGVPIKNMEQALPKNSRIIRAMPNTPALVRQG 242 (303)
Q Consensus 165 ~v~~d~~eav~~ADIVILAVp-P~~v-~~VL~eI~~~L~~g~IVVSiaaGV~ie~L~~~l~~~~~VVr~mPn~p~~v~~G 242 (303)
..+++..+++++||+||=||+ .-.+ .+++.+|..+.++++||-|-.+++++..|.+.+..-.+++.+|+--|..+- -
T Consensus 76 ~~~~~l~~a~~~ad~ViEav~E~l~iK~~lf~~l~~~~~~~aIlaSNTSsl~is~ia~~~~~p~r~ig~HffNP~~~m-~ 154 (319)
T 3ado_A 76 SSCTNLAEAVEGVVHIQECVPENLDLKRKIFAQLDSIVDDRVVLSSSSSCLLPSKLFTGLAHVKQCIVAHPVNPPYYI-P 154 (319)
T ss_dssp EEECCHHHHTTTEEEEEECCCSCHHHHHHHHHHHHTTCCSSSEEEECCSSCCHHHHHTTCTTGGGEEEEEECSSTTTC-C
T ss_pred ccccchHhHhccCcEEeeccccHHHHHHHHHHHHHHHhhhcceeehhhhhccchhhhhhccCCCcEEEecCCCCcccc-c
Confidence 345677888999999999997 3334 478888988888999988999999999999887643478888876554332 2
Q ss_pred cEEEEeCCCCCHHHHHHHHHHHHhcCCc-EEc
Q psy6714 243 ASVFVRGSSASDQDAQTVINLFKSVGTC-EEV 273 (303)
Q Consensus 243 ~til~~g~~~~~e~~e~V~~Lfs~iG~~-v~v 273 (303)
..=++.+...+++..+.+..+++.+|+. +.+
T Consensus 155 LVEiv~g~~Ts~~~~~~~~~~~~~~gk~pv~v 186 (319)
T 3ado_A 155 LVELVPHPETSPATVDRTHALMRKIGQSPVRV 186 (319)
T ss_dssp EEEEEECTTCCHHHHHHHHHHHHHTTCEEEEC
T ss_pred hHHhcCCCCCcHHHHHHHHHHHHHhCCccCCc
Confidence 2334677889999999999999999975 444
No 86
>4a7p_A UDP-glucose dehydrogenase; oxidoreductase, carbohydrate synthesis, exopolysaccharide; HET: NAD; 3.40A {Sphingomonas elodea}
Probab=98.61 E-value=2.6e-07 Score=91.01 Aligned_cols=135 Identities=15% Similarity=0.185 Sum_probs=85.0
Q ss_pred CCcEEEEcCChhhHHHHHHHH---------hhcHH---HHhh-------------------C-CCeEecChHHhhcCCCE
Q psy6714 132 RSDKQIAGTTERGPGALIASL---------NIVSK---ATGT-------------------M-GAKITFDNKEVTLNSEV 179 (303)
Q Consensus 132 ~mkIgIIGlG~MG~~~La~al---------~r~~e---~l~e-------------------~-Gv~v~~d~~eav~~ADI 179 (303)
..+|+|||+|.||.++..... +++.+ .+.+ . ++..++|..+++++||+
T Consensus 8 ~~~~~vIGlG~vG~~~A~~La~~G~~V~~~D~~~~kv~~l~~g~~~~~epgl~~~~~~~~~~g~l~~ttd~~ea~~~aDv 87 (446)
T 4a7p_A 8 SVRIAMIGTGYVGLVSGACFSDFGHEVVCVDKDARKIELLHQNVMPIYEPGLDALVASNVKAGRLSFTTDLAEGVKDADA 87 (446)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCSTTHHHHTTTCCSSCCTTHHHHHHHHHHTTCEEEESCHHHHHTTCSE
T ss_pred ceEEEEEcCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHhcCCCCccCCCHHHHHHhhcccCCEEEECCHHHHHhcCCE
Confidence 457999999999996432221 11111 1111 1 25677888899999999
Q ss_pred EEEeeC-Cc----------cHHHHHHhhccccCCCCEEEEecCCCcH---HHHH----hhCCCCCceEEEecCcHHhhh-
Q psy6714 180 IILAVK-PH----------IVPVALNDIKPVFNESNLLISVAGGVPI---KNME----QALPKNSRIIRAMPNTPALVR- 240 (303)
Q Consensus 180 VILAVp-P~----------~v~~VL~eI~~~L~~g~IVVSiaaGV~i---e~L~----~~l~~~~~VVr~mPn~p~~v~- 240 (303)
||+||| |. .+++++++|.++++++++||..+ ++.. +.+. +..+..--.+.+-|....+..
T Consensus 88 vii~Vptp~~~~~~~~Dl~~v~~v~~~i~~~l~~g~iVV~~S-Tv~pgtt~~l~~~l~e~~~~~d~~v~~~Pe~a~eG~a 166 (446)
T 4a7p_A 88 VFIAVGTPSRRGDGHADLSYVFAAAREIAENLTKPSVIVTKS-TVPVGTGDEVERIIAEVAPNSGAKVVSNPEFLREGAA 166 (446)
T ss_dssp EEECCCCCBCTTTCCBCTHHHHHHHHHHHHSCCSCCEEEECS-CCCTTHHHHHHHHHHHHSTTSCCEEEECCCCCCTTSH
T ss_pred EEEEcCCCCccccCCccHHHHHHHHHHHHHhcCCCCEEEEeC-CCCchHHHHHHHHHHHhCCCCCceEEeCcccccccch
Confidence 999986 43 49999999999999999988643 5553 2332 222211123455565432221
Q ss_pred -----CCcEEEEeCCCCCHHHHHHHHHHHHhcCC
Q psy6714 241 -----QGASVFVRGSSASDQDAQTVINLFKSVGT 269 (303)
Q Consensus 241 -----~G~til~~g~~~~~e~~e~V~~Lfs~iG~ 269 (303)
.-..++..++ +++..+.++.+|+.++.
T Consensus 167 ~~d~~~p~~ivvG~~--~~~~~~~~~~ly~~~~~ 198 (446)
T 4a7p_A 167 IEDFKRPDRVVVGTE--DEFARQVMREIYRPLSL 198 (446)
T ss_dssp HHHHHSCSCEEEECS--CHHHHHHHHHHHCSCC-
T ss_pred hhhccCCCEEEEeCC--cHHHHHHHHHHHHHHhc
Confidence 1113455542 57888999999999986
No 87
>3g79_A NDP-N-acetyl-D-galactosaminuronic acid dehydrogen; structural genomics, protein structure initiative; 2.40A {Methanosarcina mazei GO1}
Probab=98.43 E-value=1.2e-06 Score=87.00 Aligned_cols=104 Identities=10% Similarity=0.125 Sum_probs=61.5
Q ss_pred eEecChHHhhcCCCEEEEeeCCcc------------HHHHHHhhccccCCCCEEEEecCCCcH---HHHH-----hhCCC
Q psy6714 165 KITFDNKEVTLNSEVIILAVKPHI------------VPVALNDIKPVFNESNLLISVAGGVPI---KNME-----QALPK 224 (303)
Q Consensus 165 ~v~~d~~eav~~ADIVILAVpP~~------------v~~VL~eI~~~L~~g~IVVSiaaGV~i---e~L~-----~~l~~ 224 (303)
..+++ .+++++||+||+|||... +..++++|.++++++++||. .+++.. +.+. +..+.
T Consensus 91 ~~ttd-~ea~~~aDvViiaVptp~~~~~~~~~dl~~v~~~~~~i~~~l~~g~iVV~-~STv~pgtt~~v~~~ile~~~g~ 168 (478)
T 3g79_A 91 ECTPD-FSRISELDAVTLAIQTPFANPKDLEPDFSALIDGIRNVGKYLKPGMLVVL-ESTITPGTTEGMAKQILEEESGL 168 (478)
T ss_dssp EEESC-GGGGGGCSEEEECCCCCCCSSCCSSCCCHHHHHHHHHHHHHCCTTCEEEE-CSCCCTTTTTTHHHHHHHHHHCC
T ss_pred EEeCc-HHHHhcCCEEEEecCCchhccCCccccHHHHHHHHHHHHhhcCCCcEEEE-eCCCChHHHHHHHHHHHHHhcCC
Confidence 44455 778999999999997432 66777889888989998873 334443 2222 22221
Q ss_pred --CCc-eEEEecCcHHhh------hCCcEEEEeCCCCCHHHHHHHHHHHHhc-CC-cEEc
Q psy6714 225 --NSR-IIRAMPNTPALV------RQGASVFVRGSSASDQDAQTVINLFKSV-GT-CEEV 273 (303)
Q Consensus 225 --~~~-VVr~mPn~p~~v------~~G~til~~g~~~~~e~~e~V~~Lfs~i-G~-~v~v 273 (303)
+.. .+-.-|...... ..-..++..+ +++..+.++++|+.+ +. .+.+
T Consensus 169 ~~~~d~~v~~~Pe~~~~G~a~~~~~~~~~Iv~G~---~~~~~~~~~~ly~~~~~~~~~~~ 225 (478)
T 3g79_A 169 KAGEDFALAHAPERVMVGRLLKNIREHDRIVGGI---DEASTKRAVELYSPVLTVGQVIP 225 (478)
T ss_dssp CBTTTBEEEECCCCCCTTSHHHHHHHSCEEEEES---SHHHHHHHHHHHGGGCSSCCEEE
T ss_pred CcCCceeEEeCCccCCccchhhhhcCCcEEEEeC---CHHHHHHHHHHHhhhccCCeEEe
Confidence 011 233334321111 0111344444 677889999999999 65 4444
No 88
>2y0c_A BCEC, UDP-glucose dehydrogenase; oxidoreductase, carbohydrate synthesis, exopolysaccharide, C fibrosis; HET: UGA; 1.75A {Burkholderia cepacia} PDB: 2y0d_A* 2y0e_A*
Probab=98.43 E-value=2.7e-07 Score=91.50 Aligned_cols=140 Identities=13% Similarity=0.151 Sum_probs=85.7
Q ss_pred CCCcEEEEcCChhhHHHHHHHH----------hhcHHH---HhhC--------------------CCeEecChHHhhcCC
Q psy6714 131 NRSDKQIAGTTERGPGALIASL----------NIVSKA---TGTM--------------------GAKITFDNKEVTLNS 177 (303)
Q Consensus 131 ~~mkIgIIGlG~MG~~~La~al----------~r~~e~---l~e~--------------------Gv~v~~d~~eav~~A 177 (303)
+.|||+|||+|.||.+ ++..+ +++.++ +.+. .+..++|..+++++|
T Consensus 7 ~~~~I~VIG~G~vG~~-lA~~la~~G~~V~~~d~~~~~v~~l~~~~~~i~e~gl~~~l~~~~~~~~l~~ttd~~~a~~~a 85 (478)
T 2y0c_A 7 GSMNLTIIGSGSVGLV-TGACLADIGHDVFCLDVDQAKIDILNNGGVPIHEPGLKEVIARNRSAGRLRFSTDIEAAVAHG 85 (478)
T ss_dssp CCCEEEEECCSHHHHH-HHHHHHHTTCEEEEECSCHHHHHHHHTTCCSSCCTTHHHHHHHHHHTTCEEEECCHHHHHHHC
T ss_pred CCceEEEECcCHHHHH-HHHHHHhCCCEEEEEECCHHHHHHHHCCCCCcCCCCHHHHHHHhcccCCEEEECCHHHHhhcC
Confidence 4699999999999995 44332 122221 2111 245667777888999
Q ss_pred CEEEEeeCC----------ccHHHHHHhhccccCCCCEEEEecCCCcH---HHHHhhCCC----C---C-ceEEEecCcH
Q psy6714 178 EVIILAVKP----------HIVPVALNDIKPVFNESNLLISVAGGVPI---KNMEQALPK----N---S-RIIRAMPNTP 236 (303)
Q Consensus 178 DIVILAVpP----------~~v~~VL~eI~~~L~~g~IVVSiaaGV~i---e~L~~~l~~----~---~-~VVr~mPn~p 236 (303)
|+||+|||. ..+++++++|.++++++++||..+ ++.. +.+.+.+.. + . -.+.+.|...
T Consensus 86 DvviiaVptp~~~~~~~dl~~v~~v~~~i~~~l~~~~iVV~~S-Tv~~gt~~~l~~~l~~~~~~g~~~~~~~v~~~Pe~~ 164 (478)
T 2y0c_A 86 DVQFIAVGTPPDEDGSADLQYVLAAARNIGRYMTGFKVIVDKS-TVPVGTAERVRAAVAEELAKRGGDQMFSVVSNPEFL 164 (478)
T ss_dssp SEEEECCCCCBCTTSSBCCHHHHHHHHHHHHHCCSCEEEEECS-CCCTTHHHHHHHHHHHHHHHTTCCCCEEEEECCCCC
T ss_pred CEEEEEeCCCcccCCCccHHHHHHHHHHHHHhcCCCCEEEEeC-CcCCCchHHHHHHHHHHhcCCCCCccEEEEEChhhh
Confidence 999999985 899999999999998898887554 6543 223222210 0 1 1234445432
Q ss_pred Hhh------hCCcEEEEeCCCCCH----HHHHHHHHHHHhcCC---cEEcC
Q psy6714 237 ALV------RQGASVFVRGSSASD----QDAQTVINLFKSVGT---CEEVP 274 (303)
Q Consensus 237 ~~v------~~G~til~~g~~~~~----e~~e~V~~Lfs~iG~---~v~vd 274 (303)
... .....++..+. ++ +..+.+.++|+.++. ++.++
T Consensus 165 ~eG~~~~~~~~p~~iviG~~--~~~~~~~~~~~~~~l~~~~~~~~~~~~~~ 213 (478)
T 2y0c_A 165 KEGAAVDDFTRPDRIVIGCD--DDVPGERARELMKKLYAPFNRNHERTLYM 213 (478)
T ss_dssp CTTCHHHHHHSCSCEEEECC--SSHHHHHHHHHHHHHTGGGGSSSCCEEEE
T ss_pred cccceeeccCCCCEEEEEEC--CCcccHHHHHHHHHHHHHHhccCCeEEcC
Confidence 211 11113444432 23 678899999998874 45543
No 89
>2gcg_A Glyoxylate reductase/hydroxypyruvate reductase; NAD(P) rossmann fold, formate/glycerate dehydrogenase substr binding domain, oxidoreductase; HET: NDP; 2.20A {Homo sapiens} PDB: 2wwr_A 2h1s_A 2q50_A
Probab=98.37 E-value=4.1e-07 Score=85.83 Aligned_cols=93 Identities=20% Similarity=0.265 Sum_probs=65.1
Q ss_pred ccCCCcEEEEcCChhhHHHHHHHHh----------hc---HHHHhhCCCeEecChHHhhcCCCEEEEeeCCc-cHHHHH-
Q psy6714 129 RWNRSDKQIAGTTERGPGALIASLN----------IV---SKATGTMGAKITFDNKEVTLNSEVIILAVKPH-IVPVAL- 193 (303)
Q Consensus 129 ~~~~mkIgIIGlG~MG~~~La~al~----------r~---~e~l~e~Gv~v~~d~~eav~~ADIVILAVpP~-~v~~VL- 193 (303)
.+..|+|||||+|.||. .++..+. +. .+.+.+.|+... +..+++++||+||+++|+. ....++
T Consensus 152 ~l~g~~vgIIG~G~iG~-~iA~~l~~~G~~V~~~d~~~~~~~~~~~~g~~~~-~l~e~l~~aDvVi~~vp~~~~t~~~i~ 229 (330)
T 2gcg_A 152 GLTQSTVGIIGLGRIGQ-AIARRLKPFGVQRFLYTGRQPRPEEAAEFQAEFV-STPELAAQSDFIVVACSLTPATEGLCN 229 (330)
T ss_dssp CCTTCEEEEECCSHHHH-HHHHHHGGGTCCEEEEESSSCCHHHHHTTTCEEC-CHHHHHHHCSEEEECCCCCTTTTTCBS
T ss_pred CCCCCEEEEECcCHHHH-HHHHHHHHCCCEEEEECCCCcchhHHHhcCceeC-CHHHHHhhCCEEEEeCCCChHHHHhhC
Confidence 35578999999999999 4655432 11 123445677765 7888899999999999864 444444
Q ss_pred HhhccccCCCCEEEEecCC--CcHHHHHhhCC
Q psy6714 194 NDIKPVFNESNLLISVAGG--VPIKNMEQALP 223 (303)
Q Consensus 194 ~eI~~~L~~g~IVVSiaaG--V~ie~L~~~l~ 223 (303)
+++...++++.+||++..| ++.+.|.+.+.
T Consensus 230 ~~~~~~mk~gailIn~srg~~v~~~aL~~aL~ 261 (330)
T 2gcg_A 230 KDFFQKMKETAVFINISRGDVVNQDDLYQALA 261 (330)
T ss_dssp HHHHHHSCTTCEEEECSCGGGBCHHHHHHHHH
T ss_pred HHHHhcCCCCcEEEECCCCcccCHHHHHHHHH
Confidence 3444567788999988877 56666766554
No 90
>2w2k_A D-mandelate dehydrogenase; 2-hydroxyacid dehydrogenase, oxidoreductase; 1.85A {Rhodotorula graminis} PDB: 2w2l_A* 2w2l_D* 2w2k_B
Probab=98.35 E-value=3.5e-07 Score=87.12 Aligned_cols=94 Identities=11% Similarity=0.085 Sum_probs=66.5
Q ss_pred cCCCcEEEEcCChhhHHHHHHHHh-h----------c---HHHHhhCCCeEecChHHhhcCCCEEEEeeCCc-cHHHHH-
Q psy6714 130 WNRSDKQIAGTTERGPGALIASLN-I----------V---SKATGTMGAKITFDNKEVTLNSEVIILAVKPH-IVPVAL- 193 (303)
Q Consensus 130 ~~~mkIgIIGlG~MG~~~La~al~-r----------~---~e~l~e~Gv~v~~d~~eav~~ADIVILAVpP~-~v~~VL- 193 (303)
+..++|||||+|.||. .++..+. . . .+...+.|+....+..+++++||+|++++|.. .+..++
T Consensus 161 l~g~~vgIIG~G~IG~-~vA~~l~~~~G~~V~~~d~~~~~~~~~~~~g~~~~~~l~ell~~aDvVil~vp~~~~t~~li~ 239 (348)
T 2w2k_A 161 PRGHVLGAVGLGAIQK-EIARKAVHGLGMKLVYYDVAPADAETEKALGAERVDSLEELARRSDCVSVSVPYMKLTHHLID 239 (348)
T ss_dssp STTCEEEEECCSHHHH-HHHHHHHHTTCCEEEEECSSCCCHHHHHHHTCEECSSHHHHHHHCSEEEECCCCSGGGTTCBC
T ss_pred CCCCEEEEEEECHHHH-HHHHHHHHhcCCEEEEECCCCcchhhHhhcCcEEeCCHHHHhccCCEEEEeCCCChHHHHHhh
Confidence 4467999999999999 4655443 2 1 12234457776667888899999999999965 355554
Q ss_pred HhhccccCCCCEEEEecCC--CcHHHHHhhCCC
Q psy6714 194 NDIKPVFNESNLLISVAGG--VPIKNMEQALPK 224 (303)
Q Consensus 194 ~eI~~~L~~g~IVVSiaaG--V~ie~L~~~l~~ 224 (303)
.++...++++.+||++..| ++.+.|.+.+..
T Consensus 240 ~~~l~~mk~gailin~srg~~vd~~aL~~aL~~ 272 (348)
T 2w2k_A 240 EAFFAAMKPGSRIVNTARGPVISQDALIAALKS 272 (348)
T ss_dssp HHHHHHSCTTEEEEECSCGGGBCHHHHHHHHHT
T ss_pred HHHHhcCCCCCEEEECCCCchhCHHHHHHHHHh
Confidence 2344457788899988877 666778777754
No 91
>1f06_A MESO-diaminopimelate D-dehydrogenase; enzyme-NADPH-inhibitor ternary complex, oxidoreductase; HET: NDP 2NP; 2.10A {Corynebacterium glutamicum} SCOP: c.2.1.3 d.81.1.3 PDB: 1dap_A* 2dap_A* 3dap_A*
Probab=98.32 E-value=5.4e-09 Score=98.13 Aligned_cols=151 Identities=13% Similarity=0.037 Sum_probs=80.5
Q ss_pred CCcEEEEcCChhhHHHHHHHHhhcHH-------------HHhhCCCeEecChHHhhcCCCEEEEeeCCccHHHHHHhhcc
Q psy6714 132 RSDKQIAGTTERGPGALIASLNIVSK-------------ATGTMGAKITFDNKEVTLNSEVIILAVKPHIVPVALNDIKP 198 (303)
Q Consensus 132 ~mkIgIIGlG~MG~~~La~al~r~~e-------------~l~e~Gv~v~~d~~eav~~ADIVILAVpP~~v~~VL~eI~~ 198 (303)
++||+|||+|+||.. ++..+.+... .+. .|+....|..+++.++|+||+|+|++...+.+...
T Consensus 3 ~irV~IiG~G~mG~~-~~~~l~~~~~~elvav~d~~~~~~~~-~gv~~~~d~~~ll~~~DvViiatp~~~h~~~~~~a-- 78 (320)
T 1f06_A 3 NIRVAIVGYGNLGRS-VEKLIAKQPDMDLVGIFSRRATLDTK-TPVFDVADVDKHADDVDVLFLCMGSATDIPEQAPK-- 78 (320)
T ss_dssp CEEEEEECCSHHHHH-HHHHHTTCSSEEEEEEEESSSCCSSS-SCEEEGGGGGGTTTTCSEEEECSCTTTHHHHHHHH--
T ss_pred CCEEEEEeecHHHHH-HHHHHhcCCCCEEEEEEcCCHHHhhc-CCCceeCCHHHHhcCCCEEEEcCCcHHHHHHHHHH--
Confidence 579999999999994 5544332210 011 35555667777777899999999988544443322
Q ss_pred ccCCCC-EEEEecCCCcHHHH----HhhCCCCCceE----EEecCcH----------HhhhCCcEEEEeCCCCC-HHHHH
Q psy6714 199 VFNESN-LLISVAGGVPIKNM----EQALPKNSRII----RAMPNTP----------ALVRQGASVFVRGSSAS-DQDAQ 258 (303)
Q Consensus 199 ~L~~g~-IVVSiaaGV~ie~L----~~~l~~~~~VV----r~mPn~p----------~~v~~G~til~~g~~~~-~e~~e 258 (303)
+..++ +|++...+++.+.+ .+....+..+. ++.|... ..++.+.+.+..+.+.. ....+
T Consensus 79 -l~aG~~Vv~ekp~~~~~~~~~~~l~~~a~~~~~v~v~~~~~~p~~~~l~~~l~~~~~~~g~~~~~~~~~~~~~~~~~~~ 157 (320)
T 1f06_A 79 -FAQFACTVDTYDNHRDIPRHRQVMNEAATAAGNVALVSTGWDPGMFSINRVYAAAVLAEHQQHTFWGPGLSQGHSDALR 157 (320)
T ss_dssp -HTTTSEEECCCCCGGGHHHHHHHHHHHHHHHTCEEECSCSBTTBHHHHHHHHHHHHCSSEEEEEEECSEECHHHHHHHH
T ss_pred -HHCCCEEEECCCCcCCHHHHHHHHHHHHHhCCCEEEEecCChHHHHHHHHHHhhccccccceecccCCCcccccccchh
Confidence 23455 44444445666555 22221111111 2223221 11111122222211111 33445
Q ss_pred HHHHHHHhcCCcEEcCCCCchhhhhhccchHH
Q psy6714 259 TVINLFKSVGTCEEVPEYLLDGITGLSGSGPA 290 (303)
Q Consensus 259 ~V~~Lfs~iG~~v~vdE~~~Da~tAlsGsgPA 290 (303)
.+..++..+|..+++ |+.+|.++ ++++|+
T Consensus 158 ~~~gi~~a~g~~i~~-e~~ld~v~--~~~~p~ 186 (320)
T 1f06_A 158 RIPGVQKAVQYTLPS-EDALEKAR--RGEAGD 186 (320)
T ss_dssp TSTTCSEEEEEEEEC-HHHHHHHH--HTCCTT
T ss_pred hcCchhhhhhcccCc-hHHHHHHh--ccCCCc
Confidence 555666666666666 77888876 788888
No 92
>1gdh_A D-glycerate dehydrogenase; oxidoreductase(CHOH (D)-NAD(P)+ (A)); 2.40A {Hyphomicrobium methylovorum} SCOP: c.2.1.4 c.23.12.1
Probab=98.31 E-value=4.1e-07 Score=85.70 Aligned_cols=93 Identities=14% Similarity=0.099 Sum_probs=65.7
Q ss_pred cCCCcEEEEcCChhhHHHHHHHH----------hh-cH--HHHhhCCCeEecChHHhhcCCCEEEEeeCCc-cHHHHH-H
Q psy6714 130 WNRSDKQIAGTTERGPGALIASL----------NI-VS--KATGTMGAKITFDNKEVTLNSEVIILAVKPH-IVPVAL-N 194 (303)
Q Consensus 130 ~~~mkIgIIGlG~MG~~~La~al----------~r-~~--e~l~e~Gv~v~~d~~eav~~ADIVILAVpP~-~v~~VL-~ 194 (303)
+..++|||||+|.||. .++..+ ++ .. +...+.|+....+..+++++||+|++++|.. ....++ +
T Consensus 144 l~g~~vgIIG~G~IG~-~~A~~l~~~G~~V~~~d~~~~~~~~~~~~g~~~~~~l~ell~~aDvVil~~p~~~~t~~~i~~ 222 (320)
T 1gdh_A 144 LDNKTLGIYGFGSIGQ-ALAKRAQGFDMDIDYFDTHRASSSDEASYQATFHDSLDSLLSVSQFFSLNAPSTPETRYFFNK 222 (320)
T ss_dssp CTTCEEEEECCSHHHH-HHHHHHHTTTCEEEEECSSCCCHHHHHHHTCEECSSHHHHHHHCSEEEECCCCCTTTTTCBSH
T ss_pred CCCCEEEEECcCHHHH-HHHHHHHHCCCEEEEECCCCcChhhhhhcCcEEcCCHHHHHhhCCEEEEeccCchHHHhhcCH
Confidence 4568999999999999 566543 22 22 2234568876557888999999999999854 355554 3
Q ss_pred hhccccCCCCEEEEecCC--CcHHHHHhhCC
Q psy6714 195 DIKPVFNESNLLISVAGG--VPIKNMEQALP 223 (303)
Q Consensus 195 eI~~~L~~g~IVVSiaaG--V~ie~L~~~l~ 223 (303)
++...++++.+||++..| ++.+.|.+.+.
T Consensus 223 ~~l~~mk~gailIn~arg~~vd~~aL~~aL~ 253 (320)
T 1gdh_A 223 ATIKSLPQGAIVVNTARGDLVDNELVVAALE 253 (320)
T ss_dssp HHHTTSCTTEEEEECSCGGGBCHHHHHHHHH
T ss_pred HHHhhCCCCcEEEECCCCcccCHHHHHHHHH
Confidence 344567789999988776 56667777664
No 93
>3ba1_A HPPR, hydroxyphenylpyruvate reductase; two domain protein, substrate binding domain, cofactor bindi domain, oxidoreductase; 1.47A {Solenostemon scutellarioides} PDB: 3baz_A*
Probab=98.24 E-value=3.9e-07 Score=86.49 Aligned_cols=93 Identities=14% Similarity=0.150 Sum_probs=63.1
Q ss_pred cCCCcEEEEcCChhhHHHHHHHHhhcHH--------HHhhCCCeEecChHHhhcCCCEEEEeeCCc-cHHHHH-Hhhccc
Q psy6714 130 WNRSDKQIAGTTERGPGALIASLNIVSK--------ATGTMGAKITFDNKEVTLNSEVIILAVKPH-IVPVAL-NDIKPV 199 (303)
Q Consensus 130 ~~~mkIgIIGlG~MG~~~La~al~r~~e--------~l~e~Gv~v~~d~~eav~~ADIVILAVpP~-~v~~VL-~eI~~~ 199 (303)
+..|+|||||+|.||. .++..+....- .-...|+....+..+++++||+|+++||+. ....++ +++...
T Consensus 162 l~g~~vgIIG~G~iG~-~vA~~l~~~G~~V~~~dr~~~~~~g~~~~~~l~ell~~aDvVil~vP~~~~t~~li~~~~l~~ 240 (333)
T 3ba1_A 162 FSGKRVGIIGLGRIGL-AVAERAEAFDCPISYFSRSKKPNTNYTYYGSVVELASNSDILVVACPLTPETTHIINREVIDA 240 (333)
T ss_dssp CTTCCEEEECCSHHHH-HHHHHHHTTTCCEEEECSSCCTTCCSEEESCHHHHHHTCSEEEECSCCCGGGTTCBCHHHHHH
T ss_pred cCCCEEEEECCCHHHH-HHHHHHHHCCCEEEEECCCchhccCceecCCHHHHHhcCCEEEEecCCChHHHHHhhHHHHhc
Confidence 4578999999999999 46655432110 001236665678888999999999999975 455555 234445
Q ss_pred cCCCCEEEEecCCCc--HHHHHhhCC
Q psy6714 200 FNESNLLISVAGGVP--IKNMEQALP 223 (303)
Q Consensus 200 L~~g~IVVSiaaGV~--ie~L~~~l~ 223 (303)
++++.+||++..|.. .+.|.+.+.
T Consensus 241 mk~gailIn~srG~~vd~~aL~~aL~ 266 (333)
T 3ba1_A 241 LGPKGVLINIGRGPHVDEPELVSALV 266 (333)
T ss_dssp HCTTCEEEECSCGGGBCHHHHHHHHH
T ss_pred CCCCCEEEECCCCchhCHHHHHHHHH
Confidence 678899998887654 356666554
No 94
>2dbq_A Glyoxylate reductase; D-3-phosphoglycerate dehydrogenase, ST genomics, NPPSFA; HET: NAP; 1.70A {Pyrococcus horikoshii} PDB: 2dbr_A* 2dbz_A*
Probab=98.24 E-value=9.6e-07 Score=83.47 Aligned_cols=92 Identities=16% Similarity=0.195 Sum_probs=63.2
Q ss_pred cCCCcEEEEcCChhhHHHHHHHHh----------hc--HHHHhhCCCeEecChHHhhcCCCEEEEeeCCcc-HHHHH-Hh
Q psy6714 130 WNRSDKQIAGTTERGPGALIASLN----------IV--SKATGTMGAKITFDNKEVTLNSEVIILAVKPHI-VPVAL-ND 195 (303)
Q Consensus 130 ~~~mkIgIIGlG~MG~~~La~al~----------r~--~e~l~e~Gv~v~~d~~eav~~ADIVILAVpP~~-v~~VL-~e 195 (303)
+..|+|||||+|.||. .++..+. +. .+.+.+.|+.. .+..+++++||+||+|+|... +..++ ++
T Consensus 148 l~g~~vgIIG~G~iG~-~iA~~l~~~G~~V~~~d~~~~~~~~~~~g~~~-~~l~~~l~~aDvVil~vp~~~~t~~~i~~~ 225 (334)
T 2dbq_A 148 VYGKTIGIIGLGRIGQ-AIAKRAKGFNMRILYYSRTRKEEVERELNAEF-KPLEDLLRESDFVVLAVPLTRETYHLINEE 225 (334)
T ss_dssp CTTCEEEEECCSHHHH-HHHHHHHHTTCEEEEECSSCCHHHHHHHCCEE-CCHHHHHHHCSEEEECCCCCTTTTTCBCHH
T ss_pred CCCCEEEEEccCHHHH-HHHHHHHhCCCEEEEECCCcchhhHhhcCccc-CCHHHHHhhCCEEEECCCCChHHHHhhCHH
Confidence 4578999999999999 4655432 11 12234567765 477888999999999998655 55555 34
Q ss_pred hccccCCCCEEEEecCCCc--HHHHHhhCC
Q psy6714 196 IKPVFNESNLLISVAGGVP--IKNMEQALP 223 (303)
Q Consensus 196 I~~~L~~g~IVVSiaaGV~--ie~L~~~l~ 223 (303)
+.+.++++.+||++..|.. .+.|.+.+.
T Consensus 226 ~~~~mk~~ailIn~srg~~v~~~aL~~aL~ 255 (334)
T 2dbq_A 226 RLKLMKKTAILINIARGKVVDTNALVKALK 255 (334)
T ss_dssp HHHHSCTTCEEEECSCGGGBCHHHHHHHHH
T ss_pred HHhcCCCCcEEEECCCCcccCHHHHHHHHH
Confidence 5556778999998876643 345666553
No 95
>2ekl_A D-3-phosphoglycerate dehydrogenase; structural genomics, NPPSFA, national project on protein structural and functional analyses; HET: NAD; 1.77A {Sulfolobus tokodaii}
Probab=98.23 E-value=2.5e-06 Score=80.03 Aligned_cols=93 Identities=18% Similarity=0.175 Sum_probs=62.4
Q ss_pred cCCCcEEEEcCChhhHHHHHHHHh----------hc--HHHHhhCCCeEecChHHhhcCCCEEEEeeCCcc-HHHHH-Hh
Q psy6714 130 WNRSDKQIAGTTERGPGALIASLN----------IV--SKATGTMGAKITFDNKEVTLNSEVIILAVKPHI-VPVAL-ND 195 (303)
Q Consensus 130 ~~~mkIgIIGlG~MG~~~La~al~----------r~--~e~l~e~Gv~v~~d~~eav~~ADIVILAVpP~~-v~~VL-~e 195 (303)
+..++|||||+|.||. .++..++ +. ...+.+.|+.. .+..+++++||+|++++|... ...++ ++
T Consensus 140 l~g~~vgIIG~G~IG~-~~A~~l~~~G~~V~~~d~~~~~~~~~~~g~~~-~~l~ell~~aDvVvl~~P~~~~t~~li~~~ 217 (313)
T 2ekl_A 140 LAGKTIGIVGFGRIGT-KVGIIANAMGMKVLAYDILDIREKAEKINAKA-VSLEELLKNSDVISLHVTVSKDAKPIIDYP 217 (313)
T ss_dssp CTTCEEEEESCSHHHH-HHHHHHHHTTCEEEEECSSCCHHHHHHTTCEE-CCHHHHHHHCSEEEECCCCCTTSCCSBCHH
T ss_pred CCCCEEEEEeeCHHHH-HHHHHHHHCCCEEEEECCCcchhHHHhcCcee-cCHHHHHhhCCEEEEeccCChHHHHhhCHH
Confidence 4568999999999999 4665432 11 12344678775 478889999999999998433 43333 23
Q ss_pred hccccCCCCEEEEecCC--CcHHHHHhhCCC
Q psy6714 196 IKPVFNESNLLISVAGG--VPIKNMEQALPK 224 (303)
Q Consensus 196 I~~~L~~g~IVVSiaaG--V~ie~L~~~l~~ 224 (303)
....++++.++|.+..| ++.+.|.+.+..
T Consensus 218 ~l~~mk~ga~lIn~arg~~vd~~aL~~aL~~ 248 (313)
T 2ekl_A 218 QFELMKDNVIIVNTSRAVAVNGKALLDYIKK 248 (313)
T ss_dssp HHHHSCTTEEEEESSCGGGBCHHHHHHHHHT
T ss_pred HHhcCCCCCEEEECCCCcccCHHHHHHHHHc
Confidence 33446688899987655 344567776653
No 96
>1mx3_A CTBP1, C-terminal binding protein 1; nuclear protein, phosphorylation, transcriptional corepresso transcription repressor; HET: NAD; 1.95A {Homo sapiens} SCOP: c.2.1.4 c.23.12.1 PDB: 1hku_A* 1hl3_A* 2hu2_A* 3ga0_A 2ome_A*
Probab=98.19 E-value=1.2e-06 Score=83.55 Aligned_cols=93 Identities=16% Similarity=0.160 Sum_probs=63.9
Q ss_pred cCCCcEEEEcCChhhHHHHHHHHhh----------cH--HHHhhCCCeEecChHHhhcCCCEEEEeeCCc-cHHHHH-Hh
Q psy6714 130 WNRSDKQIAGTTERGPGALIASLNI----------VS--KATGTMGAKITFDNKEVTLNSEVIILAVKPH-IVPVAL-ND 195 (303)
Q Consensus 130 ~~~mkIgIIGlG~MG~~~La~al~r----------~~--e~l~e~Gv~v~~d~~eav~~ADIVILAVpP~-~v~~VL-~e 195 (303)
+..++|||||+|.||. .++..+.. .. ....+.|+....+..+++++||+|++++|.. ....++ ++
T Consensus 166 l~g~tvGIIG~G~IG~-~vA~~l~~~G~~V~~~d~~~~~~~~~~~g~~~~~~l~ell~~aDvV~l~~P~t~~t~~li~~~ 244 (347)
T 1mx3_A 166 IRGETLGIIGLGRVGQ-AVALRAKAFGFNVLFYDPYLSDGVERALGLQRVSTLQDLLFHSDCVTLHCGLNEHNHHLINDF 244 (347)
T ss_dssp CTTCEEEEECCSHHHH-HHHHHHHTTTCEEEEECTTSCTTHHHHHTCEECSSHHHHHHHCSEEEECCCCCTTCTTSBSHH
T ss_pred CCCCEEEEEeECHHHH-HHHHHHHHCCCEEEEECCCcchhhHhhcCCeecCCHHHHHhcCCEEEEcCCCCHHHHHHhHHH
Confidence 4568999999999999 46654321 11 1223457766668889999999999999864 455554 33
Q ss_pred hccccCCCCEEEEecCC--CcHHHHHhhCC
Q psy6714 196 IKPVFNESNLLISVAGG--VPIKNMEQALP 223 (303)
Q Consensus 196 I~~~L~~g~IVVSiaaG--V~ie~L~~~l~ 223 (303)
....++++.+||.+..| ++.+.|.+.+.
T Consensus 245 ~l~~mk~gailIN~arg~~vd~~aL~~aL~ 274 (347)
T 1mx3_A 245 TVKQMRQGAFLVNTARGGLVDEKALAQALK 274 (347)
T ss_dssp HHTTSCTTEEEEECSCTTSBCHHHHHHHHH
T ss_pred HHhcCCCCCEEEECCCChHHhHHHHHHHHH
Confidence 44457788899988755 44556766654
No 97
>4dgs_A Dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; 2.50A {Sinorhizobium meliloti}
Probab=98.17 E-value=2.5e-06 Score=81.34 Aligned_cols=95 Identities=13% Similarity=0.136 Sum_probs=52.9
Q ss_pred ccCCCcEEEEcCChhhHHHHHHHHhhcHH--------HHhhCCCeEecChHHhhcCCCEEEEeeC-CccHHHHH-Hhhcc
Q psy6714 129 RWNRSDKQIAGTTERGPGALIASLNIVSK--------ATGTMGAKITFDNKEVTLNSEVIILAVK-PHIVPVAL-NDIKP 198 (303)
Q Consensus 129 ~~~~mkIgIIGlG~MG~~~La~al~r~~e--------~l~e~Gv~v~~d~~eav~~ADIVILAVp-P~~v~~VL-~eI~~ 198 (303)
.+..|+|||||+|.||. .++..+....- .-...++....+..+++++||+|++++| ......++ +++..
T Consensus 168 ~l~gktiGIIGlG~IG~-~vA~~l~~~G~~V~~~dr~~~~~~~~~~~~sl~ell~~aDvVil~vP~t~~t~~li~~~~l~ 246 (340)
T 4dgs_A 168 SPKGKRIGVLGLGQIGR-ALASRAEAFGMSVRYWNRSTLSGVDWIAHQSPVDLARDSDVLAVCVAASAATQNIVDASLLQ 246 (340)
T ss_dssp CCTTCEEEEECCSHHHH-HHHHHHHTTTCEEEEECSSCCTTSCCEECSSHHHHHHTCSEEEECC----------CHHHHH
T ss_pred cccCCEEEEECCCHHHH-HHHHHHHHCCCEEEEEcCCcccccCceecCCHHHHHhcCCEEEEeCCCCHHHHHHhhHHHHh
Confidence 35578999999999999 46655332110 0113355556788899999999999998 45566666 45555
Q ss_pred ccCCCCEEEEecCCCc--HHHHHhhCCC
Q psy6714 199 VFNESNLLISVAGGVP--IKNMEQALPK 224 (303)
Q Consensus 199 ~L~~g~IVVSiaaGV~--ie~L~~~l~~ 224 (303)
.++++.+||.+.-|-- .+.|.+.+..
T Consensus 247 ~mk~gailIN~aRG~vvde~aL~~aL~~ 274 (340)
T 4dgs_A 247 ALGPEGIVVNVARGNVVDEDALIEALKS 274 (340)
T ss_dssp HTTTTCEEEECSCC--------------
T ss_pred cCCCCCEEEECCCCcccCHHHHHHHHHc
Confidence 6788999998875533 3456665543
No 98
>2hk9_A Shikimate dehydrogenase; shikimate pathway, drug design, oxidoreductase; HET: ATR SKM NAP; 2.20A {Aquifex aeolicus} PDB: 2hk8_A 2hk7_A
Probab=98.16 E-value=9.7e-07 Score=80.84 Aligned_cols=108 Identities=13% Similarity=0.159 Sum_probs=70.8
Q ss_pred CCCcEEEEcCChhhHHHHHHHH----------hhcHHHH----hhCCCeEecChHHhhcCCCEEEEeeCCccHHHHHHhh
Q psy6714 131 NRSDKQIAGTTERGPGALIASL----------NIVSKAT----GTMGAKITFDNKEVTLNSEVIILAVKPHIVPVALNDI 196 (303)
Q Consensus 131 ~~mkIgIIGlG~MG~~~La~al----------~r~~e~l----~e~Gv~v~~d~~eav~~ADIVILAVpP~~v~~VL~eI 196 (303)
..++|+|||+|.||.+ ++..+ ++..+++ .++|+.+..+..++++++|+||+|+|+....++...+
T Consensus 128 ~~~~v~iiGaG~~g~a-ia~~L~~~g~~V~v~~r~~~~~~~l~~~~g~~~~~~~~~~~~~aDiVi~atp~~~~~~~~~~i 206 (275)
T 2hk9_A 128 KEKSILVLGAGGASRA-VIYALVKEGAKVFLWNRTKEKAIKLAQKFPLEVVNSPEEVIDKVQVIVNTTSVGLKDEDPEIF 206 (275)
T ss_dssp GGSEEEEECCSHHHHH-HHHHHHHHTCEEEEECSSHHHHHHHTTTSCEEECSCGGGTGGGCSEEEECSSTTSSTTCCCSS
T ss_pred CCCEEEEECchHHHHH-HHHHHHHcCCEEEEEECCHHHHHHHHHHcCCeeehhHHhhhcCCCEEEEeCCCCCCCCCCCCC
Confidence 4578999999999994 44432 2333322 2447666557778889999999999977543221112
Q ss_pred -ccccCCCCEEEEecCCCcHHHHHhhCCCCCceEEEecCcHHhhhCCc
Q psy6714 197 -KPVFNESNLLISVAGGVPIKNMEQALPKNSRIIRAMPNTPALVRQGA 243 (303)
Q Consensus 197 -~~~L~~g~IVVSiaaGV~ie~L~~~l~~~~~VVr~mPn~p~~v~~G~ 243 (303)
...++++++|+++.. .....++.... ..++++|++++.++++.
T Consensus 207 ~~~~l~~g~~viDv~~-~~t~ll~~a~~---~g~~~v~g~~mlv~q~~ 250 (275)
T 2hk9_A 207 NYDLIKKDHVVVDIIY-KETKLLKKAKE---KGAKLLDGLPMLLWQGI 250 (275)
T ss_dssp CGGGCCTTSEEEESSS-SCCHHHHHHHH---TTCEEECSHHHHHHHHH
T ss_pred CHHHcCCCCEEEEcCC-ChHHHHHHHHH---CcCEEECCHHHHHHHHH
Confidence 234678889998776 55444444332 23578899999887764
No 99
>2nac_A NAD-dependent formate dehydrogenase; oxidoreductase(aldehyde(D),NAD+(A)); 1.80A {Pseudomonas SP} SCOP: c.2.1.4 c.23.12.1 PDB: 2nad_A* 2go1_A 2gug_A* 2gsd_A* 3fn4_A
Probab=98.12 E-value=3.1e-06 Score=82.21 Aligned_cols=94 Identities=12% Similarity=0.160 Sum_probs=65.2
Q ss_pred cCCCcEEEEcCChhhHHHHHHHHh----------hc---HHHHhhCCCeEecChHHhhcCCCEEEEeeCCc-cHHHHH-H
Q psy6714 130 WNRSDKQIAGTTERGPGALIASLN----------IV---SKATGTMGAKITFDNKEVTLNSEVIILAVKPH-IVPVAL-N 194 (303)
Q Consensus 130 ~~~mkIgIIGlG~MG~~~La~al~----------r~---~e~l~e~Gv~v~~d~~eav~~ADIVILAVpP~-~v~~VL-~ 194 (303)
+..++|||||+|.||. .++..++ +. .+...+.|+....+..+++++||+|++++|.. ....++ +
T Consensus 189 l~gktvGIIGlG~IG~-~vA~~l~a~G~~V~~~d~~~~~~~~~~~~G~~~~~~l~ell~~aDvV~l~~Plt~~t~~li~~ 267 (393)
T 2nac_A 189 LEAMHVGTVAAGRIGL-AVLRRLAPFDVHLHYTDRHRLPESVEKELNLTWHATREDMYPVCDVVTLNCPLHPETEHMIND 267 (393)
T ss_dssp CTTCEEEEECCSHHHH-HHHHHHGGGTCEEEEECSSCCCHHHHHHHTCEECSSHHHHGGGCSEEEECSCCCTTTTTCBSH
T ss_pred CCCCEEEEEeECHHHH-HHHHHHHhCCCEEEEEcCCccchhhHhhcCceecCCHHHHHhcCCEEEEecCCchHHHHHhhH
Confidence 4568999999999999 4665532 11 12334568876667889999999999999843 445555 3
Q ss_pred hhccccCCCCEEEEecCC--CcHHHHHhhCCC
Q psy6714 195 DIKPVFNESNLLISVAGG--VPIKNMEQALPK 224 (303)
Q Consensus 195 eI~~~L~~g~IVVSiaaG--V~ie~L~~~l~~ 224 (303)
+....++++.+||.+.-| ++.+.|.+.+..
T Consensus 268 ~~l~~mk~gailIN~aRG~~vde~aL~~aL~~ 299 (393)
T 2nac_A 268 ETLKLFKRGAYIVNTARGKLCDRDAVARALES 299 (393)
T ss_dssp HHHTTSCTTEEEEECSCGGGBCHHHHHHHHHT
T ss_pred HHHhhCCCCCEEEECCCchHhhHHHHHHHHHc
Confidence 444557789999988755 344567776653
No 100
>3gg9_A D-3-phosphoglycerate dehydrogenase oxidoreductase; structural genomics, PSI-2, P structure initiative; 1.90A {Ralstonia solanacearum}
Probab=98.11 E-value=2.9e-06 Score=81.14 Aligned_cols=94 Identities=12% Similarity=0.071 Sum_probs=63.9
Q ss_pred ccCCCcEEEEcCChhhHHHHHHHHh----------hcH--HHHhhCCCeEecChHHhhcCCCEEEEeeCC-ccHHHHH-H
Q psy6714 129 RWNRSDKQIAGTTERGPGALIASLN----------IVS--KATGTMGAKITFDNKEVTLNSEVIILAVKP-HIVPVAL-N 194 (303)
Q Consensus 129 ~~~~mkIgIIGlG~MG~~~La~al~----------r~~--e~l~e~Gv~v~~d~~eav~~ADIVILAVpP-~~v~~VL-~ 194 (303)
.+..++|||||+|.||. .++..++ +.. +.+.+.|+....+..+++++||+|++++|. .....++ .
T Consensus 157 ~l~g~tvGIIGlG~IG~-~vA~~l~~~G~~V~~~d~~~~~~~~~~~g~~~~~~l~ell~~aDiV~l~~Plt~~t~~li~~ 235 (352)
T 3gg9_A 157 VLKGQTLGIFGYGKIGQ-LVAGYGRAFGMNVLVWGRENSKERARADGFAVAESKDALFEQSDVLSVHLRLNDETRSIITV 235 (352)
T ss_dssp CCTTCEEEEECCSHHHH-HHHHHHHHTTCEEEEECSHHHHHHHHHTTCEECSSHHHHHHHCSEEEECCCCSTTTTTCBCH
T ss_pred cCCCCEEEEEeECHHHH-HHHHHHHhCCCEEEEECCCCCHHHHHhcCceEeCCHHHHHhhCCEEEEeccCcHHHHHhhCH
Confidence 35578999999999999 4665432 111 234567888767899999999999999983 3344443 2
Q ss_pred hhccccCCCCEEEEecCC--CcHHHHHhhCC
Q psy6714 195 DIKPVFNESNLLISVAGG--VPIKNMEQALP 223 (303)
Q Consensus 195 eI~~~L~~g~IVVSiaaG--V~ie~L~~~l~ 223 (303)
+....++++.+||.+.-| ++.+.|.+.|.
T Consensus 236 ~~l~~mk~gailIN~aRg~~vd~~aL~~aL~ 266 (352)
T 3gg9_A 236 ADLTRMKPTALFVNTSRAELVEENGMVTALN 266 (352)
T ss_dssp HHHTTSCTTCEEEECSCGGGBCTTHHHHHHH
T ss_pred HHHhhCCCCcEEEECCCchhhcHHHHHHHHH
Confidence 344457789999977633 33455655553
No 101
>1wwk_A Phosphoglycerate dehydrogenase; riken structural genomics/proteomics initiative, RSGI, structural genomics, oxidoreductase; HET: NAD; 1.90A {Pyrococcus horikoshii}
Probab=98.11 E-value=3.1e-06 Score=79.15 Aligned_cols=92 Identities=16% Similarity=0.184 Sum_probs=61.7
Q ss_pred cCCCcEEEEcCChhhHHHHHHHHh----------hc--HHHHhhCCCeEecChHHhhcCCCEEEEeeCCcc-HHHHH-Hh
Q psy6714 130 WNRSDKQIAGTTERGPGALIASLN----------IV--SKATGTMGAKITFDNKEVTLNSEVIILAVKPHI-VPVAL-ND 195 (303)
Q Consensus 130 ~~~mkIgIIGlG~MG~~~La~al~----------r~--~e~l~e~Gv~v~~d~~eav~~ADIVILAVpP~~-v~~VL-~e 195 (303)
+..++|||||+|.||. .++..++ +. .+.+.+.|+.. .+..+++++||+|++++|... ...++ .+
T Consensus 140 l~g~~vgIiG~G~IG~-~~A~~l~~~G~~V~~~d~~~~~~~~~~~g~~~-~~l~ell~~aDvV~l~~p~~~~t~~li~~~ 217 (307)
T 1wwk_A 140 LEGKTIGIIGFGRIGY-QVAKIANALGMNILLYDPYPNEERAKEVNGKF-VDLETLLKESDVVTIHVPLVESTYHLINEE 217 (307)
T ss_dssp CTTCEEEEECCSHHHH-HHHHHHHHTTCEEEEECSSCCHHHHHHTTCEE-CCHHHHHHHCSEEEECCCCSTTTTTCBCHH
T ss_pred cCCceEEEEccCHHHH-HHHHHHHHCCCEEEEECCCCChhhHhhcCccc-cCHHHHHhhCCEEEEecCCChHHhhhcCHH
Confidence 4568999999999999 5665432 11 12345678765 478889999999999998533 44444 23
Q ss_pred hccccCCCCEEEEecCC--CcHHHHHhhCC
Q psy6714 196 IKPVFNESNLLISVAGG--VPIKNMEQALP 223 (303)
Q Consensus 196 I~~~L~~g~IVVSiaaG--V~ie~L~~~l~ 223 (303)
....++++.++|.+.-| ++.+.|.+.+.
T Consensus 218 ~l~~mk~ga~lin~arg~~vd~~aL~~aL~ 247 (307)
T 1wwk_A 218 RLKLMKKTAILINTSRGPVVDTNALVKALK 247 (307)
T ss_dssp HHHHSCTTCEEEECSCGGGBCHHHHHHHHH
T ss_pred HHhcCCCCeEEEECCCCcccCHHHHHHHHH
Confidence 33456788999987655 34455665553
No 102
>3ojo_A CAP5O; rossmann fold, complex with cofactor NAD and EU(PDC)3, oxidi conformation, oxidoreductase; HET: NAD PDC; 2.50A {Staphylococcus aureus} PDB: 3ojl_A*
Probab=98.09 E-value=1.1e-05 Score=79.13 Aligned_cols=133 Identities=18% Similarity=0.183 Sum_probs=76.4
Q ss_pred CcEEEEcCChhhHHHHHHHH---------hhcHHHHh---h-------------------CC-CeEecChHHhhcCCCEE
Q psy6714 133 SDKQIAGTTERGPGALIASL---------NIVSKATG---T-------------------MG-AKITFDNKEVTLNSEVI 180 (303)
Q Consensus 133 mkIgIIGlG~MG~~~La~al---------~r~~e~l~---e-------------------~G-v~v~~d~~eav~~ADIV 180 (303)
.|+.|||+|.||.+|..... +++.++.. + .| +..+++ +++||+|
T Consensus 12 ~~~~ViGlGyvGlp~A~~La~~G~~V~~~D~~~~kv~~L~~g~~pi~epgl~~ll~~~~~~g~l~~ttd----~~~aDvv 87 (431)
T 3ojo_A 12 SKLTVVGLGYIGLPTSIMFAKHGVDVLGVDINQQTIDKLQNGQISIEEPGLQEVYEEVLSSGKLKVSTT----PEASDVF 87 (431)
T ss_dssp CEEEEECCSTTHHHHHHHHHHTTCEEEEECSCHHHHHHHHTTCCSSCCTTHHHHHHHHHHTTCEEEESS----CCCCSEE
T ss_pred CccEEEeeCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHCCCCCcCCCCHHHHHHhhcccCceEEeCc----hhhCCEE
Confidence 58999999999996433221 22222221 1 12 233333 4589999
Q ss_pred EEeeC-Cc-----------cHHHHHHhhccccCCCCEEEEecCCCcHH---HHHh----hCCC--CCc-eEEEecCc---
Q psy6714 181 ILAVK-PH-----------IVPVALNDIKPVFNESNLLISVAGGVPIK---NMEQ----ALPK--NSR-IIRAMPNT--- 235 (303)
Q Consensus 181 ILAVp-P~-----------~v~~VL~eI~~~L~~g~IVVSiaaGV~ie---~L~~----~l~~--~~~-VVr~mPn~--- 235 (303)
|+||| |. .+..++++|.++++++++|| ..+++... .+.+ ..+. +.. .+-.-|..
T Consensus 88 ii~VpTp~~~~~~~~~Dl~~V~~~~~~i~~~l~~g~iVV-~~STV~pgtt~~v~~~i~e~~g~~~~~d~~v~~~Pe~~~~ 166 (431)
T 3ojo_A 88 IIAVPTPNNDDQYRSCDISLVMRALDSILPFLKKGNTII-VESTIAPKTMDDFVKPVIENLGFTIGEDIYLVHCPERVLP 166 (431)
T ss_dssp EECCCCCBCSSSSCBBCCHHHHHHHHHHGGGCCTTEEEE-ECSCCCTTHHHHTHHHHHHTTTCCBTTTEEEEECCCCCCT
T ss_pred EEEeCCCccccccCCccHHHHHHHHHHHHHhCCCCCEEE-EecCCChhHHHHHHHHHHHHcCCCcCCCeEEEECCCcCCC
Confidence 99997 43 27788889999999998877 34455542 2222 1111 011 23333422
Q ss_pred --HHhhhCCc-EEEEeCCCCCHHHHHHHHHHHHhcCC-cEEc
Q psy6714 236 --PALVRQGA-SVFVRGSSASDQDAQTVINLFKSVGT-CEEV 273 (303)
Q Consensus 236 --p~~v~~G~-til~~g~~~~~e~~e~V~~Lfs~iG~-~v~v 273 (303)
+....... .++..+ +++..+.++++|+.++. .+.+
T Consensus 167 G~A~~~~~~p~~Iv~G~---~~~~~~~~~~ly~~~~~~~~~~ 205 (431)
T 3ojo_A 167 GKILEELVHNNRIIGGV---TKACIEAGKRVYRTFVQGEMIE 205 (431)
T ss_dssp TSHHHHHHHSCEEEEES---SHHHHHHHHHHHTTTCCSCEEE
T ss_pred cchhhcccCCCEEEEeC---CHHHHHHHHHHHHHHhCCcEEe
Confidence 11111111 344443 68889999999999986 3444
No 103
>3jtm_A Formate dehydrogenase, mitochondrial; mitochondrion, NAD, oxidoreductase, T peptide; 1.30A {Arabidopsis thaliana} PDB: 3n7u_A* 3naq_A
Probab=98.08 E-value=3.1e-06 Score=80.98 Aligned_cols=93 Identities=16% Similarity=0.223 Sum_probs=64.6
Q ss_pred cCCCcEEEEcCChhhHHHHHHHHh----------hc---HHHHhhCCCeEecChHHhhcCCCEEEEeeCC-ccHHHHH-H
Q psy6714 130 WNRSDKQIAGTTERGPGALIASLN----------IV---SKATGTMGAKITFDNKEVTLNSEVIILAVKP-HIVPVAL-N 194 (303)
Q Consensus 130 ~~~mkIgIIGlG~MG~~~La~al~----------r~---~e~l~e~Gv~v~~d~~eav~~ADIVILAVpP-~~v~~VL-~ 194 (303)
+..|+|||||+|.||. .++..++ +. .+.+.+.|+....+..+++++||+|++++|. .....++ .
T Consensus 162 l~gktvGIIG~G~IG~-~vA~~l~~~G~~V~~~dr~~~~~~~~~~~g~~~~~~l~ell~~aDvV~l~~Plt~~t~~li~~ 240 (351)
T 3jtm_A 162 LEGKTIGTVGAGRIGK-LLLQRLKPFGCNLLYHDRLQMAPELEKETGAKFVEDLNEMLPKCDVIVINMPLTEKTRGMFNK 240 (351)
T ss_dssp STTCEEEEECCSHHHH-HHHHHHGGGCCEEEEECSSCCCHHHHHHHCCEECSCHHHHGGGCSEEEECSCCCTTTTTCBSH
T ss_pred ccCCEEeEEEeCHHHH-HHHHHHHHCCCEEEEeCCCccCHHHHHhCCCeEcCCHHHHHhcCCEEEECCCCCHHHHHhhcH
Confidence 4578999999999999 5665532 21 2344567887777899999999999999984 3444443 3
Q ss_pred hhccccCCCCEEEEecCC--CcHHHHHhhCC
Q psy6714 195 DIKPVFNESNLLISVAGG--VPIKNMEQALP 223 (303)
Q Consensus 195 eI~~~L~~g~IVVSiaaG--V~ie~L~~~l~ 223 (303)
+....++++.+||.+.-| ++.+.|.+.|.
T Consensus 241 ~~l~~mk~gailIN~aRG~~vde~aL~~aL~ 271 (351)
T 3jtm_A 241 ELIGKLKKGVLIVNNARGAIMERQAVVDAVE 271 (351)
T ss_dssp HHHHHSCTTEEEEECSCGGGBCHHHHHHHHH
T ss_pred HHHhcCCCCCEEEECcCchhhCHHHHHHHHH
Confidence 344456788999977633 34566766664
No 104
>4hkt_A Inositol 2-dehydrogenase; structural genomics, nysgrc, PSI-biology, NEW YORK structura genomics research consortium, oxidoreductase; HET: MSE; 2.00A {Sinorhizobium meliloti}
Probab=98.08 E-value=2.8e-05 Score=72.16 Aligned_cols=86 Identities=6% Similarity=0.100 Sum_probs=56.3
Q ss_pred CCCcEEEEcCChhhHHHHHHHHhh------------cHHH----HhhCCCeEecChHHhhc--CCCEEEEeeCCccHHHH
Q psy6714 131 NRSDKQIAGTTERGPGALIASLNI------------VSKA----TGTMGAKITFDNKEVTL--NSEVIILAVKPHIVPVA 192 (303)
Q Consensus 131 ~~mkIgIIGlG~MG~~~La~al~r------------~~e~----l~e~Gv~v~~d~~eav~--~ADIVILAVpP~~v~~V 192 (303)
+++||||||+|.||. .++..+.. ..++ ..++|+. ..+..++++ ++|+|++|+|+..-.++
T Consensus 2 m~~~vgiiG~G~~g~-~~~~~l~~~~~~~l~av~d~~~~~~~~~~~~~~~~-~~~~~~~l~~~~~D~V~i~tp~~~h~~~ 79 (331)
T 4hkt_A 2 MTVRFGLLGAGRIGK-VHAKAVSGNADARLVAVADAFPAAAEAIAGAYGCE-VRTIDAIEAAADIDAVVICTPTDTHADL 79 (331)
T ss_dssp -CEEEEEECCSHHHH-HHHHHHHHCTTEEEEEEECSSHHHHHHHHHHTTCE-ECCHHHHHHCTTCCEEEECSCGGGHHHH
T ss_pred CceEEEEECCCHHHH-HHHHHHhhCCCcEEEEEECCCHHHHHHHHHHhCCC-cCCHHHHhcCCCCCEEEEeCCchhHHHH
Confidence 467999999999998 44443321 2222 2356888 788899887 79999999998887777
Q ss_pred HHhhccccCCCCEEEEec-CCCcHHHHHhh
Q psy6714 193 LNDIKPVFNESNLLISVA-GGVPIKNMEQA 221 (303)
Q Consensus 193 L~eI~~~L~~g~IVVSia-aGV~ie~L~~~ 221 (303)
+..... .++-|+.-. -+.+.+..+++
T Consensus 80 ~~~al~---~gk~v~~EKP~~~~~~~~~~l 106 (331)
T 4hkt_A 80 IERFAR---AGKAIFCEKPIDLDAERVRAC 106 (331)
T ss_dssp HHHHHH---TTCEEEECSCSCSSHHHHHHH
T ss_pred HHHHHH---cCCcEEEecCCCCCHHHHHHH
Confidence 765433 445444221 24555554443
No 105
>2d0i_A Dehydrogenase; structural genomics, NPPSFA, national project protein structural and functional analyses; 1.95A {Pyrococcus horikoshii}
Probab=98.07 E-value=1.8e-06 Score=81.67 Aligned_cols=91 Identities=19% Similarity=0.227 Sum_probs=61.7
Q ss_pred cCCCcEEEEcCChhhHHHHHHHHhh----------c--HHHHhhCCCeEecChHHhhcCCCEEEEeeCCc-cHHHHHH-h
Q psy6714 130 WNRSDKQIAGTTERGPGALIASLNI----------V--SKATGTMGAKITFDNKEVTLNSEVIILAVKPH-IVPVALN-D 195 (303)
Q Consensus 130 ~~~mkIgIIGlG~MG~~~La~al~r----------~--~e~l~e~Gv~v~~d~~eav~~ADIVILAVpP~-~v~~VL~-e 195 (303)
+..++|||||+|.||. .++..+.. . .+...+.|+.. .+..+++++||+|++|+|.. .+..++. +
T Consensus 144 l~g~~vgIIG~G~iG~-~vA~~l~~~G~~V~~~d~~~~~~~~~~~g~~~-~~l~e~l~~aDiVil~vp~~~~t~~~i~~~ 221 (333)
T 2d0i_A 144 LYGKKVGILGMGAIGK-AIARRLIPFGVKLYYWSRHRKVNVEKELKARY-MDIDELLEKSDIVILALPLTRDTYHIINEE 221 (333)
T ss_dssp STTCEEEEECCSHHHH-HHHHHHGGGTCEEEEECSSCCHHHHHHHTEEE-CCHHHHHHHCSEEEECCCCCTTTTTSBCHH
T ss_pred CCcCEEEEEccCHHHH-HHHHHHHHCCCEEEEECCCcchhhhhhcCcee-cCHHHHHhhCCEEEEcCCCChHHHHHhCHH
Confidence 4578999999999999 56655321 1 12233557765 37778899999999999976 5555553 3
Q ss_pred hccccCCCCEEEEecCCCcH--HHHHhhCC
Q psy6714 196 IKPVFNESNLLISVAGGVPI--KNMEQALP 223 (303)
Q Consensus 196 I~~~L~~g~IVVSiaaGV~i--e~L~~~l~ 223 (303)
+...++++ +||++..|... +.|.+.+.
T Consensus 222 ~~~~mk~g-ilin~srg~~vd~~aL~~aL~ 250 (333)
T 2d0i_A 222 RVKKLEGK-YLVNIGRGALVDEKAVTEAIK 250 (333)
T ss_dssp HHHHTBTC-EEEECSCGGGBCHHHHHHHHH
T ss_pred HHhhCCCC-EEEECCCCcccCHHHHHHHHH
Confidence 34456788 88988766443 34555554
No 106
>2ho3_A Oxidoreductase, GFO/IDH/MOCA family; streptococcus pneumonia reductive methylation, structural genomics, PSI-2, protein initiative; HET: MLY; 2.00A {Streptococcus pneumoniae} PDB: 2ho5_A
Probab=98.05 E-value=6.2e-05 Score=69.66 Aligned_cols=86 Identities=6% Similarity=-0.057 Sum_probs=55.9
Q ss_pred CCcEEEEcCChhhHHHHHHHHhh------------cHHH---H-hhCCC-eEecChHHhh-cCCCEEEEeeCCccHHHHH
Q psy6714 132 RSDKQIAGTTERGPGALIASLNI------------VSKA---T-GTMGA-KITFDNKEVT-LNSEVIILAVKPHIVPVAL 193 (303)
Q Consensus 132 ~mkIgIIGlG~MG~~~La~al~r------------~~e~---l-~e~Gv-~v~~d~~eav-~~ADIVILAVpP~~v~~VL 193 (303)
||||||||+|.||. .++..+.. ..++ + .++|+ ....+..+++ .++|+|++|+|+....+++
T Consensus 1 ~~~vgiiG~G~~g~-~~~~~l~~~~~~~~~~v~d~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~D~V~i~tp~~~h~~~~ 79 (325)
T 2ho3_A 1 MLKLGVIGTGAISH-HFIEAAHTSGEYQLVAIYSRKLETAATFASRYQNIQLFDQLEVFFKSSFDLVYIASPNSLHFAQA 79 (325)
T ss_dssp CEEEEEECCSHHHH-HHHHHHHHTTSEEEEEEECSSHHHHHHHGGGSSSCEEESCHHHHHTSSCSEEEECSCGGGHHHHH
T ss_pred CeEEEEEeCCHHHH-HHHHHHHhCCCeEEEEEEeCCHHHHHHHHHHcCCCeEeCCHHHHhCCCCCEEEEeCChHHHHHHH
Confidence 57999999999998 44443321 1222 2 34575 6678888888 6899999999998877777
Q ss_pred HhhccccCCCCEEEEec-CCCcHHHHHhh
Q psy6714 194 NDIKPVFNESNLLISVA-GGVPIKNMEQA 221 (303)
Q Consensus 194 ~eI~~~L~~g~IVVSia-aGV~ie~L~~~ 221 (303)
.... ..|+-|+.-. -..+.+..+++
T Consensus 80 ~~al---~~gk~V~~EKP~~~~~~~~~~l 105 (325)
T 2ho3_A 80 KAAL---SAGKHVILEKPAVSQPQEWFDL 105 (325)
T ss_dssp HHHH---HTTCEEEEESSCCSSHHHHHHH
T ss_pred HHHH---HcCCcEEEecCCcCCHHHHHHH
Confidence 6543 3455455332 24455544443
No 107
>2j6i_A Formate dehydrogenase; oxidoreductase, D-specific-2- hydroxy acid dehydrogenase, cofactor regenerator, yeast, CBFDH; HET: PG4; 1.55A {Candida boidinii} PDB: 2fss_A
Probab=98.03 E-value=4.5e-06 Score=80.04 Aligned_cols=93 Identities=15% Similarity=0.220 Sum_probs=64.1
Q ss_pred cCCCcEEEEcCChhhHHHHHHHHhh-----------c---HHHHhhCCCeEecChHHhhcCCCEEEEeeCCc-cHHHHH-
Q psy6714 130 WNRSDKQIAGTTERGPGALIASLNI-----------V---SKATGTMGAKITFDNKEVTLNSEVIILAVKPH-IVPVAL- 193 (303)
Q Consensus 130 ~~~mkIgIIGlG~MG~~~La~al~r-----------~---~e~l~e~Gv~v~~d~~eav~~ADIVILAVpP~-~v~~VL- 193 (303)
+..++|||||+|.||. .++..+.. . .+.+.+.|+....+..+++++||+|++++|.. ....++
T Consensus 162 l~g~tvgIIG~G~IG~-~vA~~l~~~G~~~V~~~d~~~~~~~~~~~~g~~~~~~l~ell~~aDvV~l~~P~t~~t~~li~ 240 (364)
T 2j6i_A 162 IEGKTIATIGAGRIGY-RVLERLVPFNPKELLYYDYQALPKDAEEKVGARRVENIEELVAQADIVTVNAPLHAGTKGLIN 240 (364)
T ss_dssp STTCEEEEECCSHHHH-HHHHHHGGGCCSEEEEECSSCCCHHHHHHTTEEECSSHHHHHHTCSEEEECCCCSTTTTTCBC
T ss_pred CCCCEEEEECcCHHHH-HHHHHHHhCCCcEEEEECCCccchhHHHhcCcEecCCHHHHHhcCCEEEECCCCChHHHHHhC
Confidence 4568999999999999 46654321 1 12344667776567889999999999999864 344444
Q ss_pred HhhccccCCCCEEEEecCC--CcHHHHHhhCC
Q psy6714 194 NDIKPVFNESNLLISVAGG--VPIKNMEQALP 223 (303)
Q Consensus 194 ~eI~~~L~~g~IVVSiaaG--V~ie~L~~~l~ 223 (303)
++....++++.+||.+.-| ++.+.|.+.+.
T Consensus 241 ~~~l~~mk~ga~lIn~arG~~vd~~aL~~aL~ 272 (364)
T 2j6i_A 241 KELLSKFKKGAWLVNTARGAICVAEDVAAALE 272 (364)
T ss_dssp HHHHTTSCTTEEEEECSCGGGBCHHHHHHHHH
T ss_pred HHHHhhCCCCCEEEECCCCchhCHHHHHHHHH
Confidence 2344457788899988755 45566766664
No 108
>3euw_A MYO-inositol dehydrogenase; protein structure initiative II (PSI II), NYSGXRC, MYO-inosi dehydrogenase, oxidoreductase, tetramer; 2.30A {Corynebacterium glutamicum}
Probab=98.02 E-value=3.6e-05 Score=71.85 Aligned_cols=85 Identities=11% Similarity=0.044 Sum_probs=56.6
Q ss_pred CCcEEEEcCChhhHHHHHHHHhh------------cHHH----HhhCCCeEecChHHhhc--CCCEEEEeeCCccHHHHH
Q psy6714 132 RSDKQIAGTTERGPGALIASLNI------------VSKA----TGTMGAKITFDNKEVTL--NSEVIILAVKPHIVPVAL 193 (303)
Q Consensus 132 ~mkIgIIGlG~MG~~~La~al~r------------~~e~----l~e~Gv~v~~d~~eav~--~ADIVILAVpP~~v~~VL 193 (303)
++||||||+|.||.. ++..+.. ..++ ..++|+....+..++++ ++|+|++|+|+....+++
T Consensus 4 ~~rvgiiG~G~~g~~-~~~~l~~~~~~~l~av~d~~~~~~~~~a~~~g~~~~~~~~~~l~~~~~D~V~i~tp~~~h~~~~ 82 (344)
T 3euw_A 4 TLRIALFGAGRIGHV-HAANIAANPDLELVVIADPFIEGAQRLAEANGAEAVASPDEVFARDDIDGIVIGSPTSTHVDLI 82 (344)
T ss_dssp CEEEEEECCSHHHHH-HHHHHHHCTTEEEEEEECSSHHHHHHHHHTTTCEEESSHHHHTTCSCCCEEEECSCGGGHHHHH
T ss_pred ceEEEEECCcHHHHH-HHHHHHhCCCcEEEEEECCCHHHHHHHHHHcCCceeCCHHHHhcCCCCCEEEEeCCchhhHHHH
Confidence 679999999999984 4444321 2222 23568888899999988 899999999988887777
Q ss_pred HhhccccCCCCEEEEe-cCCCcHHHHHh
Q psy6714 194 NDIKPVFNESNLLISV-AGGVPIKNMEQ 220 (303)
Q Consensus 194 ~eI~~~L~~g~IVVSi-aaGV~ie~L~~ 220 (303)
..... .++-|+.- --+.+.+..++
T Consensus 83 ~~al~---~gk~v~~EKP~~~~~~~~~~ 107 (344)
T 3euw_A 83 TRAVE---RGIPALCEKPIDLDIEMVRA 107 (344)
T ss_dssp HHHHH---TTCCEEECSCSCSCHHHHHH
T ss_pred HHHHH---cCCcEEEECCCCCCHHHHHH
Confidence 65543 34434422 12455554444
No 109
>3ezy_A Dehydrogenase; structural genomics, unknown function, PSI-2, protein structure initiative; 2.04A {Thermotoga maritima}
Probab=98.01 E-value=3.6e-05 Score=71.93 Aligned_cols=87 Identities=9% Similarity=0.118 Sum_probs=56.4
Q ss_pred CCCcEEEEcCChhhHHHHHHHHhh------------cHHH----HhhCCC-eEecChHHhhc--CCCEEEEeeCCccHHH
Q psy6714 131 NRSDKQIAGTTERGPGALIASLNI------------VSKA----TGTMGA-KITFDNKEVTL--NSEVIILAVKPHIVPV 191 (303)
Q Consensus 131 ~~mkIgIIGlG~MG~~~La~al~r------------~~e~----l~e~Gv-~v~~d~~eav~--~ADIVILAVpP~~v~~ 191 (303)
|+|||||||+|.||. .++..+.. ..++ ..++|+ .+..|..++++ ++|+|++|+|+..-.+
T Consensus 1 M~~rvgiIG~G~~g~-~~~~~l~~~~~~~l~av~d~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~~D~V~i~tp~~~h~~ 79 (344)
T 3ezy_A 1 MSLRIGVIGLGRIGT-IHAENLKMIDDAILYAISDVREDRLREMKEKLGVEKAYKDPHELIEDPNVDAVLVCSSTNTHSE 79 (344)
T ss_dssp -CEEEEEECCSHHHH-HHHHHGGGSTTEEEEEEECSCHHHHHHHHHHHTCSEEESSHHHHHHCTTCCEEEECSCGGGHHH
T ss_pred CeeEEEEEcCCHHHH-HHHHHHHhCCCcEEEEEECCCHHHHHHHHHHhCCCceeCCHHHHhcCCCCCEEEEcCCCcchHH
Confidence 357999999999999 45544321 2222 235576 47788999887 7999999999888777
Q ss_pred HHHhhccccCCCCEEEEec-CCCcHHHHHhh
Q psy6714 192 ALNDIKPVFNESNLLISVA-GGVPIKNMEQA 221 (303)
Q Consensus 192 VL~eI~~~L~~g~IVVSia-aGV~ie~L~~~ 221 (303)
++..... .|+-|+.-. -+++.+..+++
T Consensus 80 ~~~~al~---~gk~v~~EKP~~~~~~e~~~l 107 (344)
T 3ezy_A 80 LVIACAK---AKKHVFCEKPLSLNLADVDRM 107 (344)
T ss_dssp HHHHHHH---TTCEEEEESCSCSCHHHHHHH
T ss_pred HHHHHHh---cCCeEEEECCCCCCHHHHHHH
Confidence 7665432 455444222 24555554443
No 110
>3rc1_A Sugar 3-ketoreductase; sugar biosynthesis, TDP binding, NADP binding binding protein; HET: TLO NAP; 1.71A {Actinomadura kijaniata} PDB: 3rbv_A* 3rc2_A* 3rcb_A* 3rc7_A* 3rc9_A*
Probab=98.00 E-value=4.4e-05 Score=71.83 Aligned_cols=87 Identities=6% Similarity=0.003 Sum_probs=56.2
Q ss_pred CCcEEEEcCChhhHHHHHHHHh------------hcHHH----HhhCCCeEecChHHhhc--CCCEEEEeeCCccHHHHH
Q psy6714 132 RSDKQIAGTTERGPGALIASLN------------IVSKA----TGTMGAKITFDNKEVTL--NSEVIILAVKPHIVPVAL 193 (303)
Q Consensus 132 ~mkIgIIGlG~MG~~~La~al~------------r~~e~----l~e~Gv~v~~d~~eav~--~ADIVILAVpP~~v~~VL 193 (303)
++||||||+|.||...++..+. +..++ ..++|+....+.+++++ +.|+|++|+|+..-.+++
T Consensus 27 ~~rigiIG~G~~g~~~~~~~l~~~~~~~l~av~d~~~~~~~~~a~~~g~~~~~~~~~ll~~~~~D~V~i~tp~~~h~~~~ 106 (350)
T 3rc1_A 27 PIRVGVIGCADIAWRRALPALEAEPLTEVTAIASRRWDRAKRFTERFGGEPVEGYPALLERDDVDAVYVPLPAVLHAEWI 106 (350)
T ss_dssp CEEEEEESCCHHHHHTHHHHHHHCTTEEEEEEEESSHHHHHHHHHHHCSEEEESHHHHHTCTTCSEEEECCCGGGHHHHH
T ss_pred ceEEEEEcCcHHHHHHHHHHHHhCCCeEEEEEEcCCHHHHHHHHHHcCCCCcCCHHHHhcCCCCCEEEECCCcHHHHHHH
Confidence 5799999999999722333221 12222 23568887788999886 589999999988877777
Q ss_pred HhhccccCCCCEEEEec-CCCcHHHHHhh
Q psy6714 194 NDIKPVFNESNLLISVA-GGVPIKNMEQA 221 (303)
Q Consensus 194 ~eI~~~L~~g~IVVSia-aGV~ie~L~~~ 221 (303)
..... .|+-|+.-. -+.+.+..+++
T Consensus 107 ~~al~---aGk~Vl~EKP~a~~~~ea~~l 132 (350)
T 3rc1_A 107 DRALR---AGKHVLAEKPLTTDRPQAERL 132 (350)
T ss_dssp HHHHH---TTCEEEEESSSCSSHHHHHHH
T ss_pred HHHHH---CCCcEEEeCCCCCCHHHHHHH
Confidence 65432 455455321 24455555544
No 111
>3gvx_A Glycerate dehydrogenase related protein; NYSGXRC, PSI-II, 11143J, structural genomics, protein structure initiative; 2.20A {Thermoplasma acidophilum}
Probab=98.00 E-value=2e-06 Score=80.23 Aligned_cols=93 Identities=12% Similarity=0.057 Sum_probs=60.0
Q ss_pred cCCCcEEEEcCChhhHHHHHHHHhhcHHH--------HhhCCCeEecChHHhhcCCCEEEEeeCC-ccHHHHH-Hhhccc
Q psy6714 130 WNRSDKQIAGTTERGPGALIASLNIVSKA--------TGTMGAKITFDNKEVTLNSEVIILAVKP-HIVPVAL-NDIKPV 199 (303)
Q Consensus 130 ~~~mkIgIIGlG~MG~~~La~al~r~~e~--------l~e~Gv~v~~d~~eav~~ADIVILAVpP-~~v~~VL-~eI~~~ 199 (303)
+..++|||||+|.||. .++..++...-+ -....+....+..+++++||+|++++|. .....++ .+....
T Consensus 120 l~g~tvGIIGlG~IG~-~vA~~l~~~G~~V~~~dr~~~~~~~~~~~~~l~ell~~aDiV~l~~P~t~~t~~li~~~~l~~ 198 (290)
T 3gvx_A 120 LYGKALGILGYGGIGR-RVAHLAKAFGMRVIAYTRSSVDQNVDVISESPADLFRQSDFVLIAIPLTDKTRGMVNSRLLAN 198 (290)
T ss_dssp CTTCEEEEECCSHHHH-HHHHHHHHHTCEEEEECSSCCCTTCSEECSSHHHHHHHCSEEEECCCCCTTTTTCBSHHHHTT
T ss_pred eecchheeeccCchhH-HHHHHHHhhCcEEEEEeccccccccccccCChHHHhhccCeEEEEeeccccchhhhhHHHHhh
Confidence 4568999999999999 466543221100 0011244455788999999999999983 4454444 345556
Q ss_pred cCCCCEEEEecCC--CcHHHHHhhCC
Q psy6714 200 FNESNLLISVAGG--VPIKNMEQALP 223 (303)
Q Consensus 200 L~~g~IVVSiaaG--V~ie~L~~~l~ 223 (303)
++++.+||.+.-| ++.+.|.+.+.
T Consensus 199 mk~gailIN~aRG~~vd~~aL~~aL~ 224 (290)
T 3gvx_A 199 ARKNLTIVNVARADVVSKPDMIGFLK 224 (290)
T ss_dssp CCTTCEEEECSCGGGBCHHHHHHHHH
T ss_pred hhcCceEEEeehhcccCCcchhhhhh
Confidence 7789999987633 34455655553
No 112
>2g76_A 3-PGDH, D-3-phosphoglycerate dehydrogenase; oxidoreductase, phosphoglycerate dehydrogenase deficiency, S metabolism, 2-hydroxyacid dehydrogenases; HET: NAD; 1.70A {Homo sapiens}
Probab=98.00 E-value=7.3e-06 Score=77.82 Aligned_cols=92 Identities=13% Similarity=0.132 Sum_probs=63.0
Q ss_pred cCCCcEEEEcCChhhHHHHHHHHh----------hc--HHHHhhCCCeEecChHHhhcCCCEEEEeeCCc-cHHHHH-Hh
Q psy6714 130 WNRSDKQIAGTTERGPGALIASLN----------IV--SKATGTMGAKITFDNKEVTLNSEVIILAVKPH-IVPVAL-ND 195 (303)
Q Consensus 130 ~~~mkIgIIGlG~MG~~~La~al~----------r~--~e~l~e~Gv~v~~d~~eav~~ADIVILAVpP~-~v~~VL-~e 195 (303)
+..++|||||+|.||. .++..++ +. .+.+.+.|+.. .+..+++++||+|++++|.. ....++ ++
T Consensus 163 l~g~tvgIIGlG~IG~-~vA~~l~~~G~~V~~~d~~~~~~~~~~~g~~~-~~l~ell~~aDvV~l~~P~t~~t~~li~~~ 240 (335)
T 2g76_A 163 LNGKTLGILGLGRIGR-EVATRMQSFGMKTIGYDPIISPEVSASFGVQQ-LPLEEIWPLCDFITVHTPLLPSTTGLLNDN 240 (335)
T ss_dssp CTTCEEEEECCSHHHH-HHHHHHHTTTCEEEEECSSSCHHHHHHTTCEE-CCHHHHGGGCSEEEECCCCCTTTTTSBCHH
T ss_pred CCcCEEEEEeECHHHH-HHHHHHHHCCCEEEEECCCcchhhhhhcCcee-CCHHHHHhcCCEEEEecCCCHHHHHhhCHH
Confidence 4568999999999999 5665432 11 12345678764 47888999999999999854 355555 34
Q ss_pred hccccCCCCEEEEecCCC--cHHHHHhhCC
Q psy6714 196 IKPVFNESNLLISVAGGV--PIKNMEQALP 223 (303)
Q Consensus 196 I~~~L~~g~IVVSiaaGV--~ie~L~~~l~ 223 (303)
+...++++.++|.+.-|- +.+.|.+.+.
T Consensus 241 ~l~~mk~gailIN~arg~vvd~~aL~~aL~ 270 (335)
T 2g76_A 241 TFAQCKKGVRVVNCARGGIVDEGALLRALQ 270 (335)
T ss_dssp HHTTSCTTEEEEECSCTTSBCHHHHHHHHH
T ss_pred HHhhCCCCcEEEECCCccccCHHHHHHHHH
Confidence 455677888988776543 3445666554
No 113
>3zwc_A Peroxisomal bifunctional enzyme; beta oxidation pathway, oxidoreductase, lipid metabolism, LY isomerase, peroxisome, fatty acid metabolism; HET: NAD HSC; 2.30A {Rattus norvegicus} PDB: 3zw9_A* 3zw8_A* 3zwa_A* 3zwb_A* 2x58_A*
Probab=97.99 E-value=0.00013 Score=76.11 Aligned_cols=106 Identities=13% Similarity=0.165 Sum_probs=79.6
Q ss_pred EecChHHhhcCCCEEEEeeC-CccH-HHHHHhhccccCCCCEEEEecCCCcHHHHHhhCCCCCceEEEecCcHHhhhCCc
Q psy6714 166 ITFDNKEVTLNSEVIILAVK-PHIV-PVALNDIKPVFNESNLLISVAGGVPIKNMEQALPKNSRIIRAMPNTPALVRQGA 243 (303)
Q Consensus 166 v~~d~~eav~~ADIVILAVp-P~~v-~~VL~eI~~~L~~g~IVVSiaaGV~ie~L~~~l~~~~~VVr~mPn~p~~v~~G~ 243 (303)
.+.+ .+.+.+||+||=||+ .-.+ .+++.+|..+.++++|+-|-.+++++..|.+.+..-.+++.+|.--|...- -.
T Consensus 384 ~~~~-~~~l~~aDlVIEAV~E~l~iK~~vf~~le~~~~~~aIlASNTSsl~i~~ia~~~~~p~r~ig~HFfnP~~~m-~L 461 (742)
T 3zwc_A 384 FSSS-TKELSTVDLVVEAVFEDMNLKKKVFAELSALCKPGAFLCTNTSALNVDDIASSTDRPQLVIGTHFFSPAHVM-RL 461 (742)
T ss_dssp EESC-GGGGGSCSEEEECCCSCHHHHHHHHHHHHHHSCTTCEEEECCSSSCHHHHHTTSSCGGGEEEEECCSSTTTC-CE
T ss_pred ccCc-HHHHhhCCEEEEeccccHHHHHHHHHHHhhcCCCCceEEecCCcCChHHHHhhcCCccccccccccCCCCCC-ce
Confidence 3344 445789999999996 3334 377888888888999998999999999999877543478888865554322 22
Q ss_pred EEEEeCCCCCHHHHHHHHHHHHhcCCc-EEc
Q psy6714 244 SVFVRGSSASDQDAQTVINLFKSVGTC-EEV 273 (303)
Q Consensus 244 til~~g~~~~~e~~e~V~~Lfs~iG~~-v~v 273 (303)
.=++.+...+++.++.+..+.+.+|+. +.+
T Consensus 462 VEvi~g~~Ts~e~~~~~~~~~~~lgK~pV~v 492 (742)
T 3zwc_A 462 LEVIPSRYSSPTTIATVMSLSKKIGKIGVVV 492 (742)
T ss_dssp EEEEECSSCCHHHHHHHHHHHHHTTCEEEEC
T ss_pred EEEecCCCCCHHHHHHHHHHHHHhCCCCccc
Confidence 334577888999999999999999985 444
No 114
>3ulk_A Ketol-acid reductoisomerase; branched-chain amino acid biosynthesis, rossmann fold, acetolactate, oxidoreductase; HET: CSX NDP; 2.30A {Escherichia coli} PDB: 1yrl_A*
Probab=97.97 E-value=2.9e-05 Score=76.61 Aligned_cols=137 Identities=12% Similarity=0.177 Sum_probs=98.7
Q ss_pred cCCCcEEEEcCChhhHHHHHHHHh-------------------hcHHHHhhCCCeEecChHHhhcCCCEEEEeeCCccHH
Q psy6714 130 WNRSDKQIAGTTERGPGALIASLN-------------------IVSKATGTMGAKITFDNKEVTLNSEVIILAVKPHIVP 190 (303)
Q Consensus 130 ~~~mkIgIIGlG~MG~~~La~al~-------------------r~~e~l~e~Gv~v~~d~~eav~~ADIVILAVpP~~v~ 190 (303)
++.+||+|||.|.-|.+ =++.++ ...+++.+.|+.+ .+..|+++.+|||++-+|+..-.
T Consensus 35 lkgK~IaVIGyGsQG~A-qAlNLRDSGv~V~Vglr~~s~~e~~~S~~~A~~~Gf~v-~~~~eA~~~ADvV~~L~PD~~q~ 112 (491)
T 3ulk_A 35 LQGKKVVIVGCGAQGLN-QGLNMRDSGLDISYALRKEAIAEKRASWRKATENGFKV-GTYEELIPQADLVINLTPDKQHS 112 (491)
T ss_dssp GTTSEEEEESCSHHHHH-HHHHHHHTTCEEEEEECHHHHHTTCHHHHHHHHTTCEE-EEHHHHGGGCSEEEECSCGGGHH
T ss_pred HcCCEEEEeCCChHhHH-HHhHHHhcCCcEEEEeCCCCcccccchHHHHHHCCCEe-cCHHHHHHhCCEEEEeCChhhHH
Confidence 45789999999999983 232211 1123456789987 56889999999999999999999
Q ss_pred HHHHhhccccCCCCEEEEecCCCcHHHHHhhCCCCCceEEEecCcHHh-------hhCCcEEEEeC---CCCCHHHHHHH
Q psy6714 191 VALNDIKPVFNESNLLISVAGGVPIKNMEQALPKNSRIIRAMPNTPAL-------VRQGASVFVRG---SSASDQDAQTV 260 (303)
Q Consensus 191 ~VL~eI~~~L~~g~IVVSiaaGV~ie~L~~~l~~~~~VVr~mPn~p~~-------v~~G~til~~g---~~~~~e~~e~V 260 (303)
++.++|.|++++|+.++ .+-|..+..-.-..|.+..|+-+-|--|.. -+.|++.++.- .+.+....+..
T Consensus 113 ~vy~~I~p~lk~G~~L~-faHGFnI~~~~i~pp~dvdVimVAPKgpG~~VR~~y~~G~GvP~liAVhqeqD~sG~a~~~A 191 (491)
T 3ulk_A 113 DVVRTVQPLMKDGAALG-YSHGFNIVEVGEQIRKDITVVMVAPKCPGTEVREEYKRGFGVPTLIAVHPENDPKGEGMAIA 191 (491)
T ss_dssp HHHHHHGGGSCTTCEEE-ESSCHHHHTTCCCCCTTSEEEEEEESSCHHHHHHHHHTTCCCCEEEEECGGGCTTSCHHHHH
T ss_pred HHHHHHHhhCCCCCEEE-ecCcccccccccccCCCcceEEeCCCCCcHHHHHHHHcCCCCceEEEEEeCCCCchhHHHHH
Confidence 99999999999998754 888886642222335567788887776642 24566544432 34456678888
Q ss_pred HHHHHhcCC
Q psy6714 261 INLFKSVGT 269 (303)
Q Consensus 261 ~~Lfs~iG~ 269 (303)
......+|.
T Consensus 192 layA~aiG~ 200 (491)
T 3ulk_A 192 KAWAAATGG 200 (491)
T ss_dssp HHHHHHHTG
T ss_pred HHHHHhcCC
Confidence 899999984
No 115
>1hyh_A L-hicdh, L-2-hydroxyisocaproate dehydrogenase; L-2-hydroxycarboxylate dehydrogenase, L-lactate dehydrogenas oxidoreductase (CHOH(D)-NAD+(A)); HET: NAD; 2.20A {Weissella confusa} SCOP: c.2.1.5 d.162.1.1
Probab=97.96 E-value=1.6e-05 Score=73.78 Aligned_cols=81 Identities=15% Similarity=0.132 Sum_probs=54.5
Q ss_pred CCcEEEEcCChhhHHHHHHHH-h-----------hcHHHH---h-h---------CCCeE-ecChHHhhcCCCEEEEeeC
Q psy6714 132 RSDKQIAGTTERGPGALIASL-N-----------IVSKAT---G-T---------MGAKI-TFDNKEVTLNSEVIILAVK 185 (303)
Q Consensus 132 ~mkIgIIGlG~MG~~~La~al-~-----------r~~e~l---~-e---------~Gv~v-~~d~~eav~~ADIVILAVp 185 (303)
||||+|||+|.||.+ ++..+ . +..+++ . + ..+.+ ..+. +++++||+||+|++
T Consensus 1 m~kI~VIGaG~~G~~-la~~L~~~g~~~~V~l~d~~~~~~~~~~~~l~~~~~~~~~~~~~~~~d~-~~~~~aDvViiav~ 78 (309)
T 1hyh_A 1 ARKIGIIGLGNVGAA-VAHGLIAQGVADDYVFIDANEAKVKADQIDFQDAMANLEAHGNIVINDW-AALADADVVISTLG 78 (309)
T ss_dssp CCEEEEECCSHHHHH-HHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHHHGGGSSSCCEEEESCG-GGGTTCSEEEECCS
T ss_pred CCEEEEECCCHHHHH-HHHHHHhCCCCCEEEEEcCCHHHHHHHHHHHHhhhhhcCCCeEEEeCCH-HHhCCCCEEEEecC
Confidence 589999999999994 54432 1 111111 1 1 12444 4555 77899999999998
Q ss_pred Ccc--------------------HHHHHHhhccccCCCCEEEEecCCCcH
Q psy6714 186 PHI--------------------VPVALNDIKPVFNESNLLISVAGGVPI 215 (303)
Q Consensus 186 P~~--------------------v~~VL~eI~~~L~~g~IVVSiaaGV~i 215 (303)
+.. +.++++.+.++. ++.+||...+++..
T Consensus 79 ~~~~~~~~~g~~r~~l~~~n~~i~~~i~~~i~~~~-~~~~ii~~tNp~~~ 127 (309)
T 1hyh_A 79 NIKLQQDNPTGDRFAELKFTSSMVQSVGTNLKESG-FHGVLVVISNPVDV 127 (309)
T ss_dssp CGGGTC-------CTTHHHHHHHHHHHHHHHHHTT-CCSEEEECSSSHHH
T ss_pred CcccCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHC-CCcEEEEEcCcHHH
Confidence 654 578888887765 56677778888776
No 116
>4hy3_A Phosphoglycerate oxidoreductase; PSI-biology, structural genomics, protein structure initiati acid transport and metabolism, NAD binding domain.; 2.80A {Rhizobium etli}
Probab=97.96 E-value=1.4e-05 Score=76.94 Aligned_cols=93 Identities=16% Similarity=0.130 Sum_probs=63.4
Q ss_pred cCCCcEEEEcCChhhHHHHHHHHh----------hc--HHHHhhCCCeEecChHHhhcCCCEEEEeeC-CccHHHHH-Hh
Q psy6714 130 WNRSDKQIAGTTERGPGALIASLN----------IV--SKATGTMGAKITFDNKEVTLNSEVIILAVK-PHIVPVAL-ND 195 (303)
Q Consensus 130 ~~~mkIgIIGlG~MG~~~La~al~----------r~--~e~l~e~Gv~v~~d~~eav~~ADIVILAVp-P~~v~~VL-~e 195 (303)
+..++|||||+|.||. .++..++ +. .+.+.+.|+.. .+..+++++||+|++++| ......++ .+
T Consensus 174 l~gktvGIIGlG~IG~-~vA~~l~~fG~~V~~~d~~~~~~~~~~~g~~~-~~l~ell~~aDvV~l~~Plt~~T~~li~~~ 251 (365)
T 4hy3_A 174 IAGSEIGIVGFGDLGK-ALRRVLSGFRARIRVFDPWLPRSMLEENGVEP-ASLEDVLTKSDFIFVVAAVTSENKRFLGAE 251 (365)
T ss_dssp SSSSEEEEECCSHHHH-HHHHHHTTSCCEEEEECSSSCHHHHHHTTCEE-CCHHHHHHSCSEEEECSCSSCC---CCCHH
T ss_pred cCCCEEEEecCCcccH-HHHHhhhhCCCEEEEECCCCCHHHHhhcCeee-CCHHHHHhcCCEEEEcCcCCHHHHhhcCHH
Confidence 4578999999999999 5665532 11 22345678764 578899999999999998 34555555 34
Q ss_pred hccccCCCCEEEEecCC--CcHHHHHhhCCC
Q psy6714 196 IKPVFNESNLLISVAGG--VPIKNMEQALPK 224 (303)
Q Consensus 196 I~~~L~~g~IVVSiaaG--V~ie~L~~~l~~ 224 (303)
....++++.++|.+.-| ++.+.|.+.|..
T Consensus 252 ~l~~mk~gailIN~aRG~~vde~aL~~aL~~ 282 (365)
T 4hy3_A 252 AFSSMRRGAAFILLSRADVVDFDALMAAVSS 282 (365)
T ss_dssp HHHTSCTTCEEEECSCGGGSCHHHHHHHHHT
T ss_pred HHhcCCCCcEEEECcCCchhCHHHHHHHHHc
Confidence 44557789999977633 455667776653
No 117
>4e5n_A Thermostable phosphite dehydrogenase; D-2-hydroxyacid dehydrogenase, oxidoreductase; HET: NAD; 1.70A {Pseudomonas stutzeri} PDB: 4e5k_A* 4ebf_A* 4e5p_A* 4e5m_A*
Probab=97.93 E-value=5e-06 Score=78.70 Aligned_cols=92 Identities=17% Similarity=0.217 Sum_probs=62.4
Q ss_pred cCCCcEEEEcCChhhHHHHHHHHh----------hc---HHHHhhCCCeEecChHHhhcCCCEEEEeeCC-ccHHHHH-H
Q psy6714 130 WNRSDKQIAGTTERGPGALIASLN----------IV---SKATGTMGAKITFDNKEVTLNSEVIILAVKP-HIVPVAL-N 194 (303)
Q Consensus 130 ~~~mkIgIIGlG~MG~~~La~al~----------r~---~e~l~e~Gv~v~~d~~eav~~ADIVILAVpP-~~v~~VL-~ 194 (303)
+..++|||||+|.||. .++..++ +. .+...+.|+.. .+..+++++||+|++++|. .....++ .
T Consensus 143 l~g~tvGIIG~G~IG~-~vA~~l~~~G~~V~~~d~~~~~~~~~~~~g~~~-~~l~ell~~aDvV~l~~P~t~~t~~li~~ 220 (330)
T 4e5n_A 143 LDNATVGFLGMGAIGL-AMADRLQGWGATLQYHEAKALDTQTEQRLGLRQ-VACSELFASSDFILLALPLNADTLHLVNA 220 (330)
T ss_dssp STTCEEEEECCSHHHH-HHHHHTTTSCCEEEEECSSCCCHHHHHHHTEEE-CCHHHHHHHCSEEEECCCCSTTTTTCBCH
T ss_pred cCCCEEEEEeeCHHHH-HHHHHHHHCCCEEEEECCCCCcHhHHHhcCcee-CCHHHHHhhCCEEEEcCCCCHHHHHHhCH
Confidence 4578999999999999 5665432 22 22334567754 4788999999999999983 3444444 3
Q ss_pred hhccccCCCCEEEEecCC--CcHHHHHhhCC
Q psy6714 195 DIKPVFNESNLLISVAGG--VPIKNMEQALP 223 (303)
Q Consensus 195 eI~~~L~~g~IVVSiaaG--V~ie~L~~~l~ 223 (303)
++...++++.+||.+.-| ++.+.|.+.+.
T Consensus 221 ~~l~~mk~gailIN~arg~~vd~~aL~~aL~ 251 (330)
T 4e5n_A 221 ELLALVRPGALLVNPCRGSVVDEAAVLAALE 251 (330)
T ss_dssp HHHTTSCTTEEEEECSCGGGBCHHHHHHHHH
T ss_pred HHHhhCCCCcEEEECCCCchhCHHHHHHHHH
Confidence 445567789999987643 34456666554
No 118
>1qp8_A Formate dehydrogenase; oxidoreductase; HET: NDP; 2.80A {Pyrobaculum aerophilum} SCOP: c.2.1.4 c.23.12.1
Probab=97.93 E-value=3e-06 Score=79.26 Aligned_cols=93 Identities=11% Similarity=0.075 Sum_probs=59.8
Q ss_pred cCCCcEEEEcCChhhHHHHHHHHhhcHHH-------HhhCCCeEecChHHhhcCCCEEEEeeCCc-cHHHHHH-hhcccc
Q psy6714 130 WNRSDKQIAGTTERGPGALIASLNIVSKA-------TGTMGAKITFDNKEVTLNSEVIILAVKPH-IVPVALN-DIKPVF 200 (303)
Q Consensus 130 ~~~mkIgIIGlG~MG~~~La~al~r~~e~-------l~e~Gv~v~~d~~eav~~ADIVILAVpP~-~v~~VL~-eI~~~L 200 (303)
+..++|||||+|.||. .++..+....-+ ..+.+.....+..+++++||+|++++|.. ....++. ++...+
T Consensus 122 l~g~~vgIIG~G~IG~-~~A~~l~~~G~~V~~~dr~~~~~~~~~~~~l~ell~~aDvV~l~~P~~~~t~~~i~~~~l~~m 200 (303)
T 1qp8_A 122 IQGEKVAVLGLGEIGT-RVGKILAALGAQVRGFSRTPKEGPWRFTNSLEEALREARAAVCALPLNKHTRGLVKYQHLALM 200 (303)
T ss_dssp CTTCEEEEESCSTHHH-HHHHHHHHTTCEEEEECSSCCCSSSCCBSCSHHHHTTCSEEEECCCCSTTTTTCBCHHHHTTS
T ss_pred CCCCEEEEEccCHHHH-HHHHHHHHCCCEEEEECCCccccCcccCCCHHHHHhhCCEEEEeCcCchHHHHHhCHHHHhhC
Confidence 4578999999999999 566543221100 00113333456788999999999999865 4555553 455567
Q ss_pred CCCCEEEEecCC--CcHHHHHhhCC
Q psy6714 201 NESNLLISVAGG--VPIKNMEQALP 223 (303)
Q Consensus 201 ~~g~IVVSiaaG--V~ie~L~~~l~ 223 (303)
+++.++|.+.-| ++.+.|.+.+.
T Consensus 201 k~gailin~srg~~vd~~aL~~aL~ 225 (303)
T 1qp8_A 201 AEDAVFVNVGRAEVLDRDGVLRILK 225 (303)
T ss_dssp CTTCEEEECSCGGGBCHHHHHHHHH
T ss_pred CCCCEEEECCCCcccCHHHHHHHHH
Confidence 789999977654 23345665553
No 119
>3q2i_A Dehydrogenase; rossmann fold, UDP-sugar binding, NAD binding oxidoreductase; HET: NAD HP7; 1.50A {Chromobacterium violaceum} PDB: 3q2k_A*
Probab=97.92 E-value=7e-05 Score=70.23 Aligned_cols=86 Identities=9% Similarity=0.100 Sum_probs=56.5
Q ss_pred CCCcEEEEcCChhhHHHHHHHHhhc-------------HHH----HhhCCCeEecChHHhhc--CCCEEEEeeCCccHHH
Q psy6714 131 NRSDKQIAGTTERGPGALIASLNIV-------------SKA----TGTMGAKITFDNKEVTL--NSEVIILAVKPHIVPV 191 (303)
Q Consensus 131 ~~mkIgIIGlG~MG~~~La~al~r~-------------~e~----l~e~Gv~v~~d~~eav~--~ADIVILAVpP~~v~~ 191 (303)
.++||||||+|.||.. ++..+... .++ ..++|+....|.+++++ +.|+|++|+|+..-.+
T Consensus 12 ~~~rvgiiG~G~~g~~-~~~~l~~~~~~~~lvav~d~~~~~~~~~~~~~~~~~~~~~~~ll~~~~~D~V~i~tp~~~h~~ 90 (354)
T 3q2i_A 12 RKIRFALVGCGRIANN-HFGALEKHADRAELIDVCDIDPAALKAAVERTGARGHASLTDMLAQTDADIVILTTPSGLHPT 90 (354)
T ss_dssp SCEEEEEECCSTTHHH-HHHHHHHTTTTEEEEEEECSSHHHHHHHHHHHCCEEESCHHHHHHHCCCSEEEECSCGGGHHH
T ss_pred CcceEEEEcCcHHHHH-HHHHHHhCCCCeEEEEEEcCCHHHHHHHHHHcCCceeCCHHHHhcCCCCCEEEECCCcHHHHH
Confidence 3679999999999984 44433221 122 23568888889999886 7999999999888777
Q ss_pred HHHhhccccCCCCEEEEec-CCCcHHHHHh
Q psy6714 192 ALNDIKPVFNESNLLISVA-GGVPIKNMEQ 220 (303)
Q Consensus 192 VL~eI~~~L~~g~IVVSia-aGV~ie~L~~ 220 (303)
++..... .|+-|+.-. -+.+.+..++
T Consensus 91 ~~~~al~---~gk~v~~EKP~a~~~~~~~~ 117 (354)
T 3q2i_A 91 QSIECSE---AGFHVMTEKPMATRWEDGLE 117 (354)
T ss_dssp HHHHHHH---TTCEEEECSSSCSSHHHHHH
T ss_pred HHHHHHH---CCCCEEEeCCCcCCHHHHHH
Confidence 7655432 455555321 1344544444
No 120
>3e9m_A Oxidoreductase, GFO/IDH/MOCA family; GFO/LDH/MOCA, PSI-II, dimeric dihydodiol dehydrogenase, structural genomics; 2.70A {Enterococcus faecalis}
Probab=97.90 E-value=6e-05 Score=70.19 Aligned_cols=86 Identities=10% Similarity=0.008 Sum_probs=55.7
Q ss_pred CCcEEEEcCChhhHHHHHHHHhh------------cHHH----HhhCCC-eEecChHHhhc--CCCEEEEeeCCccHHHH
Q psy6714 132 RSDKQIAGTTERGPGALIASLNI------------VSKA----TGTMGA-KITFDNKEVTL--NSEVIILAVKPHIVPVA 192 (303)
Q Consensus 132 ~mkIgIIGlG~MG~~~La~al~r------------~~e~----l~e~Gv-~v~~d~~eav~--~ADIVILAVpP~~v~~V 192 (303)
++||||||+|.||. .++..+.. ..++ ..++|+ .+..|..++++ ++|+|++|+|+..-.++
T Consensus 5 ~~~igiiG~G~~g~-~~~~~l~~~~~~~l~av~d~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~~D~V~i~tp~~~h~~~ 83 (330)
T 3e9m_A 5 KIRYGIMSTAQIVP-RFVAGLRESAQAEVRGIASRRLENAQKMAKELAIPVAYGSYEELCKDETIDIIYIPTYNQGHYSA 83 (330)
T ss_dssp CEEEEECSCCTTHH-HHHHHHHHSSSEEEEEEBCSSSHHHHHHHHHTTCCCCBSSHHHHHHCTTCSEEEECCCGGGHHHH
T ss_pred eEEEEEECchHHHH-HHHHHHHhCCCcEEEEEEeCCHHHHHHHHHHcCCCceeCCHHHHhcCCCCCEEEEcCCCHHHHHH
Confidence 57999999999998 45544322 1122 235677 56788888887 79999999998887777
Q ss_pred HHhhccccCCCCEEEEec-CCCcHHHHHhh
Q psy6714 193 LNDIKPVFNESNLLISVA-GGVPIKNMEQA 221 (303)
Q Consensus 193 L~eI~~~L~~g~IVVSia-aGV~ie~L~~~ 221 (303)
+..... .|+-|+.-. -+.+.+..+++
T Consensus 84 ~~~al~---~gk~vl~EKP~~~~~~e~~~l 110 (330)
T 3e9m_A 84 AKLALS---QGKPVLLEKPFTLNAAEAEEL 110 (330)
T ss_dssp HHHHHH---TTCCEEECSSCCSSHHHHHHH
T ss_pred HHHHHH---CCCeEEEeCCCCCCHHHHHHH
Confidence 665433 344344221 24555555443
No 121
>4g2n_A D-isomer specific 2-hydroxyacid dehydrogenase, Na; structural genomics, protein structure initiative, nysgrc, P biology; 1.70A {Polaromonas SP}
Probab=97.90 E-value=1.1e-05 Score=77.03 Aligned_cols=94 Identities=16% Similarity=0.111 Sum_probs=62.4
Q ss_pred ccCCCcEEEEcCChhhHHHHHHHHh----------hcHH-HHhhCCCeEecChHHhhcCCCEEEEeeCC-ccHHHHH-Hh
Q psy6714 129 RWNRSDKQIAGTTERGPGALIASLN----------IVSK-ATGTMGAKITFDNKEVTLNSEVIILAVKP-HIVPVAL-ND 195 (303)
Q Consensus 129 ~~~~mkIgIIGlG~MG~~~La~al~----------r~~e-~l~e~Gv~v~~d~~eav~~ADIVILAVpP-~~v~~VL-~e 195 (303)
.+..++|||||+|.||. .++..++ +... .....|+....+..+++++||+|++++|. .....++ ++
T Consensus 170 ~l~gktvGIIGlG~IG~-~vA~~l~~~G~~V~~~dr~~~~~~~~~g~~~~~~l~ell~~sDvV~l~~Plt~~T~~li~~~ 248 (345)
T 4g2n_A 170 GLTGRRLGIFGMGRIGR-AIATRARGFGLAIHYHNRTRLSHALEEGAIYHDTLDSLLGASDIFLIAAPGRPELKGFLDHD 248 (345)
T ss_dssp CCTTCEEEEESCSHHHH-HHHHHHHTTTCEEEEECSSCCCHHHHTTCEECSSHHHHHHTCSEEEECSCCCGGGTTCBCHH
T ss_pred ccCCCEEEEEEeChhHH-HHHHHHHHCCCEEEEECCCCcchhhhcCCeEeCCHHHHHhhCCEEEEecCCCHHHHHHhCHH
Confidence 35578999999999999 4665432 2211 11123777666889999999999999983 3344343 23
Q ss_pred hccccCCCCEEEEecCC--CcHHHHHhhCC
Q psy6714 196 IKPVFNESNLLISVAGG--VPIKNMEQALP 223 (303)
Q Consensus 196 I~~~L~~g~IVVSiaaG--V~ie~L~~~l~ 223 (303)
....++++.+||.+.-| ++.+.|.+.|.
T Consensus 249 ~l~~mk~gailIN~aRG~~vde~aL~~aL~ 278 (345)
T 4g2n_A 249 RIAKIPEGAVVINISRGDLINDDALIEALR 278 (345)
T ss_dssp HHHHSCTTEEEEECSCGGGBCHHHHHHHHH
T ss_pred HHhhCCCCcEEEECCCCchhCHHHHHHHHH
Confidence 34456788999977633 34566766664
No 122
>3evn_A Oxidoreductase, GFO/IDH/MOCA family; structural genomics; 2.00A {Streptococcus agalactiae serogroup V}
Probab=97.90 E-value=0.00011 Score=68.32 Aligned_cols=124 Identities=8% Similarity=0.032 Sum_probs=71.8
Q ss_pred CCcEEEEcCChhhHHHHHHHHhh------------cHHH----HhhCCCe-EecChHHhhc--CCCEEEEeeCCccHHHH
Q psy6714 132 RSDKQIAGTTERGPGALIASLNI------------VSKA----TGTMGAK-ITFDNKEVTL--NSEVIILAVKPHIVPVA 192 (303)
Q Consensus 132 ~mkIgIIGlG~MG~~~La~al~r------------~~e~----l~e~Gv~-v~~d~~eav~--~ADIVILAVpP~~v~~V 192 (303)
++||||||+|.||. .++..+.. ..++ ..++|+. +..+.+++++ +.|+|++|+|+..-.++
T Consensus 5 ~~rigiiG~G~ig~-~~~~~l~~~~~~~~~av~d~~~~~~~~~a~~~~~~~~~~~~~~ll~~~~~D~V~i~tp~~~h~~~ 83 (329)
T 3evn_A 5 KVRYGVVSTAKVAP-RFIEGVRLAGNGEVVAVSSRTLESAQAFANKYHLPKAYDKLEDMLADESIDVIYVATINQDHYKV 83 (329)
T ss_dssp CEEEEEEBCCTTHH-HHHHHHHHHCSEEEEEEECSCSSTTCC---CCCCSCEESCHHHHHTCTTCCEEEECSCGGGHHHH
T ss_pred ceEEEEEechHHHH-HHHHHHHhCCCcEEEEEEcCCHHHHHHHHHHcCCCcccCCHHHHhcCCCCCEEEECCCcHHHHHH
Confidence 57999999999998 45444321 1122 2345764 7788899887 79999999998887777
Q ss_pred HHhhccccCCCCEEEEec-CCCcHHHHHhhCCCCCceEEEecCcHHhhhCCcEEEEe-CCCCCHHHHHHHHHHHH--hcC
Q psy6714 193 LNDIKPVFNESNLLISVA-GGVPIKNMEQALPKNSRIIRAMPNTPALVRQGASVFVR-GSSASDQDAQTVINLFK--SVG 268 (303)
Q Consensus 193 L~eI~~~L~~g~IVVSia-aGV~ie~L~~~l~~~~~VVr~mPn~p~~v~~G~til~~-g~~~~~e~~e~V~~Lfs--~iG 268 (303)
+.... ..|+-|+.-. -+.+.+..+++... .-..|..++.. ..... .....+++++. .+|
T Consensus 84 ~~~al---~aGk~Vl~EKP~a~~~~e~~~l~~~-------------a~~~~~~~~v~~~~r~~-p~~~~~~~~i~~g~iG 146 (329)
T 3evn_A 84 AKAAL---LAGKHVLVEKPFTLTYDQANELFAL-------------AESCNLFLMEAQKSVFI-PMTQVIKKLLASGEIG 146 (329)
T ss_dssp HHHHH---HTTCEEEEESSCCSSHHHHHHHHHH-------------HHHTTCCEEEECSSCSS-HHHHHHHHHHHTTTTC
T ss_pred HHHHH---HCCCeEEEccCCcCCHHHHHHHHHH-------------HHHcCCEEEEEEcccCC-HHHHHHHHHHhCCCCC
Confidence 65543 2455555322 24455555544320 11123222221 11222 34577777887 678
Q ss_pred CcEEc
Q psy6714 269 TCEEV 273 (303)
Q Consensus 269 ~~v~v 273 (303)
....+
T Consensus 147 ~i~~v 151 (329)
T 3evn_A 147 EVISI 151 (329)
T ss_dssp SEEEE
T ss_pred CeEEE
Confidence 75443
No 123
>1lld_A L-lactate dehydrogenase; oxidoreductase(CHOH (D)-NAD (A)); HET: NAD; 2.00A {Bifidobacterium longum subsp} SCOP: c.2.1.5 d.162.1.1 PDB: 1lth_T*
Probab=97.88 E-value=1.3e-05 Score=73.96 Aligned_cols=100 Identities=15% Similarity=0.304 Sum_probs=61.2
Q ss_pred CCCcEEEEcCChhhHHHHHHHHh------------hcHHHHh------hC------CCeEe-cChHHhhcCCCEEEEeeC
Q psy6714 131 NRSDKQIAGTTERGPGALIASLN------------IVSKATG------TM------GAKIT-FDNKEVTLNSEVIILAVK 185 (303)
Q Consensus 131 ~~mkIgIIGlG~MG~~~La~al~------------r~~e~l~------e~------Gv~v~-~d~~eav~~ADIVILAVp 185 (303)
++|||+|||+|.||.. ++..+. +..+++. .. ...+. .+..+.+++||+||+|++
T Consensus 6 ~~mkI~IiGaG~vG~~-~a~~l~~~g~~~~V~l~d~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~aD~Vii~v~ 84 (319)
T 1lld_A 6 KPTKLAVIGAGAVGST-LAFAAAQRGIAREIVLEDIAKERVEAEVLDMQHGSSFYPTVSIDGSDDPEICRDADMVVITAG 84 (319)
T ss_dssp -CCEEEEECCSHHHHH-HHHHHHHTTCCSEEEEECSSHHHHHHHHHHHHHTGGGSTTCEEEEESCGGGGTTCSEEEECCC
T ss_pred CCCEEEEECCCHHHHH-HHHHHHhCCCCCEEEEEeCChhHHHHHHHHHHhhhhhcCCeEEEeCCCHHHhCCCCEEEECCC
Confidence 4689999999999994 544321 1111111 11 22332 223457889999999996
Q ss_pred Ccc----------------HHHHHHhhccccCCCCEEEEecCCCcHHH-HHh---hCCCCCceEEEec
Q psy6714 186 PHI----------------VPVALNDIKPVFNESNLLISVAGGVPIKN-MEQ---ALPKNSRIIRAMP 233 (303)
Q Consensus 186 P~~----------------v~~VL~eI~~~L~~g~IVVSiaaGV~ie~-L~~---~l~~~~~VVr~mP 233 (303)
... +.++++++.++ .++.+||++.+|+.... +.. .++. .+++....
T Consensus 85 ~~~~~g~~r~~~~~~n~~~~~~~~~~i~~~-~~~~~vi~~~Np~~~~~~~~~~~~~~~~-~~vig~~~ 150 (319)
T 1lld_A 85 PRQKPGQSRLELVGATVNILKAIMPNLVKV-APNAIYMLITNPVDIATHVAQKLTGLPE-NQIFGSGT 150 (319)
T ss_dssp CCCCTTCCHHHHHHHHHHHHHHHHHHHHHH-CTTSEEEECCSSHHHHHHHHHHHHTCCT-TSEEECTT
T ss_pred CCCCCCCCHHHHHHHHHHHHHHHHHHHHHh-CCCceEEEecCchHHHHHHHHHhcCCCH-HHEeeccc
Confidence 332 33777777774 57888999999998753 332 3553 35665533
No 124
>3c1a_A Putative oxidoreductase; ZP_00056571.1, oxidoreductase FAM binding rossmann fold, structural genomics; HET: MSE PG4 PGE; 1.85A {Magnetospirillum magnetotacticum}
Probab=97.88 E-value=4.2e-05 Score=70.57 Aligned_cols=125 Identities=14% Similarity=0.132 Sum_probs=70.8
Q ss_pred CCCcEEEEcCChhhHHHHHHHHhh------------cHHHHhhC--CCeEecChHHhhc--CCCEEEEeeCCccHHHHHH
Q psy6714 131 NRSDKQIAGTTERGPGALIASLNI------------VSKATGTM--GAKITFDNKEVTL--NSEVIILAVKPHIVPVALN 194 (303)
Q Consensus 131 ~~mkIgIIGlG~MG~~~La~al~r------------~~e~l~e~--Gv~v~~d~~eav~--~ADIVILAVpP~~v~~VL~ 194 (303)
++|||||||+|.||. .++..+.. ..+++.+. .+....+..++++ ++|+||+|+|+....+++.
T Consensus 9 ~~~~igiIG~G~~g~-~~~~~l~~~~~~~~v~v~d~~~~~~~~~~~~~~~~~~~~~~l~~~~~D~V~i~tp~~~h~~~~~ 87 (315)
T 3c1a_A 9 SPVRLALIGAGRWGK-NYIRTIAGLPGAALVRLASSNPDNLALVPPGCVIESDWRSVVSAPEVEAVIIATPPATHAEITL 87 (315)
T ss_dssp CCEEEEEEECTTTTT-THHHHHHHCTTEEEEEEEESCHHHHTTCCTTCEEESSTHHHHTCTTCCEEEEESCGGGHHHHHH
T ss_pred CcceEEEECCcHHHH-HHHHHHHhCCCcEEEEEEeCCHHHHHHHHhhCcccCCHHHHhhCCCCCEEEEeCChHHHHHHHH
Confidence 368999999999998 44444322 22233221 1556678888885 7999999999988877776
Q ss_pred hhccccCCCCEEEEe-cCCCcHHHHHhhCCCCCceEEEecCcHHhhhCCcEEEE-eCCCCCHHHHHHHHHHHHhcCCcEE
Q psy6714 195 DIKPVFNESNLLISV-AGGVPIKNMEQALPKNSRIIRAMPNTPALVRQGASVFV-RGSSASDQDAQTVINLFKSVGTCEE 272 (303)
Q Consensus 195 eI~~~L~~g~IVVSi-aaGV~ie~L~~~l~~~~~VVr~mPn~p~~v~~G~til~-~g~~~~~e~~e~V~~Lfs~iG~~v~ 272 (303)
... ..|+-|+.- --.++.+..+++... .-..|..+++ +.....+ ....++++++.+|....
T Consensus 88 ~al---~~Gk~v~~eKP~~~~~~~~~~l~~~-------------a~~~g~~~~~~~~~r~~p-~~~~~~~~i~~lG~i~~ 150 (315)
T 3c1a_A 88 AAI---ASGKAVLVEKPLTLDLAEAEAVAAA-------------AKATGVMVWVEHTQLFNP-AWEALKADLTSIGPILA 150 (315)
T ss_dssp HHH---HTTCEEEEESSSCSCHHHHHHHHHH-------------HHHHCCCEEEECGGGGCH-HHHHHHHTHHHHCSEEE
T ss_pred HHH---HCCCcEEEcCCCcCCHHHHHHHHHH-------------HHHcCCEEEEeechhcCH-HHHHHHHHHHHcCCeEE
Confidence 643 245544422 123455544443210 0112222222 1111222 34667777778897654
Q ss_pred c
Q psy6714 273 V 273 (303)
Q Consensus 273 v 273 (303)
+
T Consensus 151 v 151 (315)
T 3c1a_A 151 V 151 (315)
T ss_dssp E
T ss_pred E
Confidence 4
No 125
>2pi1_A D-lactate dehydrogenase; oxidoreductase, D-LDH, NAD, 3D-structure, structural genomics, NPPSFA; HET: MSE NAD; 2.12A {Aquifex aeolicus VF5} PDB: 3kb6_A*
Probab=97.87 E-value=1e-05 Score=76.76 Aligned_cols=93 Identities=20% Similarity=0.208 Sum_probs=61.9
Q ss_pred cCCCcEEEEcCChhhHHHHHHHHh----------hcHH-HHhhCCCeEecChHHhhcCCCEEEEeeCC-ccHHHHH-Hhh
Q psy6714 130 WNRSDKQIAGTTERGPGALIASLN----------IVSK-ATGTMGAKITFDNKEVTLNSEVIILAVKP-HIVPVAL-NDI 196 (303)
Q Consensus 130 ~~~mkIgIIGlG~MG~~~La~al~----------r~~e-~l~e~Gv~v~~d~~eav~~ADIVILAVpP-~~v~~VL-~eI 196 (303)
+..++|||||+|.||. .++..++ +..+ ...+.|+.. .+..+++++||+|++++|. .....++ .+.
T Consensus 139 l~g~tvgIiG~G~IG~-~vA~~l~~~G~~V~~~d~~~~~~~~~~g~~~-~~l~ell~~aDvV~l~~P~t~~t~~li~~~~ 216 (334)
T 2pi1_A 139 LNRLTLGVIGTGRIGS-RVAMYGLAFGMKVLCYDVVKREDLKEKGCVY-TSLDELLKESDVISLHVPYTKETHHMINEER 216 (334)
T ss_dssp GGGSEEEEECCSHHHH-HHHHHHHHTTCEEEEECSSCCHHHHHTTCEE-CCHHHHHHHCSEEEECCCCCTTTTTCBCHHH
T ss_pred ccCceEEEECcCHHHH-HHHHHHHHCcCEEEEECCCcchhhHhcCcee-cCHHHHHhhCCEEEEeCCCChHHHHhhCHHH
Confidence 4578999999999999 4665432 1211 122557765 4588999999999999984 3444443 234
Q ss_pred ccccCCCCEEEEecCC--CcHHHHHhhCCC
Q psy6714 197 KPVFNESNLLISVAGG--VPIKNMEQALPK 224 (303)
Q Consensus 197 ~~~L~~g~IVVSiaaG--V~ie~L~~~l~~ 224 (303)
...++++.+||.+.-| ++.+.|.+.|..
T Consensus 217 l~~mk~gailIN~aRg~~vd~~aL~~aL~~ 246 (334)
T 2pi1_A 217 ISLMKDGVYLINTARGKVVDTDALYRAYQR 246 (334)
T ss_dssp HHHSCTTEEEEECSCGGGBCHHHHHHHHHT
T ss_pred HhhCCCCcEEEECCCCcccCHHHHHHHHHh
Confidence 4456788899977633 345667776653
No 126
>2cuk_A Glycerate dehydrogenase/glyoxylate reductase; structural genomics, riken structur genomics/proteomics initiative, RSGI, NPPSFA; HET: NHE; 2.00A {Thermus thermophilus}
Probab=97.84 E-value=1.1e-05 Score=75.56 Aligned_cols=92 Identities=14% Similarity=0.126 Sum_probs=58.6
Q ss_pred cCCCcEEEEcCChhhHHHHHHHHhhcHHHH-------hhCCCeEecChHHhhcCCCEEEEeeCCc-cHHHHHH-hhcccc
Q psy6714 130 WNRSDKQIAGTTERGPGALIASLNIVSKAT-------GTMGAKITFDNKEVTLNSEVIILAVKPH-IVPVALN-DIKPVF 200 (303)
Q Consensus 130 ~~~mkIgIIGlG~MG~~~La~al~r~~e~l-------~e~Gv~v~~d~~eav~~ADIVILAVpP~-~v~~VL~-eI~~~L 200 (303)
+..++|||||+|.||. +++..++...-+. ....+. ..+..+++++||+|++++|.. ....++. +....+
T Consensus 142 l~g~~vgIIG~G~IG~-~~A~~l~~~G~~V~~~d~~~~~~~~~-~~~l~ell~~aDvV~l~~p~~~~t~~li~~~~l~~m 219 (311)
T 2cuk_A 142 LQGLTLGLVGMGRIGQ-AVAKRALAFGMRVVYHARTPKPLPYP-FLSLEELLKEADVVSLHTPLTPETHRLLNRERLFAM 219 (311)
T ss_dssp CTTCEEEEECCSHHHH-HHHHHHHHTTCEEEEECSSCCSSSSC-BCCHHHHHHHCSEEEECCCCCTTTTTCBCHHHHTTS
T ss_pred CCCCEEEEEEECHHHH-HHHHHHHHCCCEEEEECCCCcccccc-cCCHHHHHhhCCEEEEeCCCChHHHhhcCHHHHhhC
Confidence 4578999999999999 5665433211000 000011 246778899999999999875 4555552 344467
Q ss_pred CCCCEEEEecCCC--cHHHHHhhCC
Q psy6714 201 NESNLLISVAGGV--PIKNMEQALP 223 (303)
Q Consensus 201 ~~g~IVVSiaaGV--~ie~L~~~l~ 223 (303)
+++.++|.+..|- +.+.|.+.+.
T Consensus 220 k~ga~lin~srg~~vd~~aL~~aL~ 244 (311)
T 2cuk_A 220 KRGAILLNTARGALVDTEALVEALR 244 (311)
T ss_dssp CTTCEEEECSCGGGBCHHHHHHHHT
T ss_pred CCCcEEEECCCCCccCHHHHHHHHh
Confidence 7899999776543 3345666665
No 127
>3pp8_A Glyoxylate/hydroxypyruvate reductase A; structural genomics, center for structural genomics of infec diseases, csgid; 2.10A {Salmonella enterica subsp} PDB: 3kbo_A
Probab=97.84 E-value=1.1e-05 Score=76.11 Aligned_cols=93 Identities=14% Similarity=0.125 Sum_probs=59.4
Q ss_pred cCCCcEEEEcCChhhHHHHHHHHhhcHHH-------H-hhCCCeEe---cChHHhhcCCCEEEEeeC-CccHHHHH-Hhh
Q psy6714 130 WNRSDKQIAGTTERGPGALIASLNIVSKA-------T-GTMGAKIT---FDNKEVTLNSEVIILAVK-PHIVPVAL-NDI 196 (303)
Q Consensus 130 ~~~mkIgIIGlG~MG~~~La~al~r~~e~-------l-~e~Gv~v~---~d~~eav~~ADIVILAVp-P~~v~~VL-~eI 196 (303)
+..|+|||||+|.||. .++..++...-+ . ...++... .+..+++++||+|++++| ......++ .+.
T Consensus 137 l~g~tvGIiG~G~IG~-~vA~~l~~~G~~V~~~dr~~~~~~~~~~~~~~~~l~ell~~aDiV~l~~Plt~~t~~li~~~~ 215 (315)
T 3pp8_A 137 REEFSVGIMGAGVLGA-KVAESLQAWGFPLRCWSRSRKSWPGVESYVGREELRAFLNQTRVLINLLPNTAQTVGIINSEL 215 (315)
T ss_dssp STTCCEEEECCSHHHH-HHHHHHHTTTCCEEEEESSCCCCTTCEEEESHHHHHHHHHTCSEEEECCCCCGGGTTCBSHHH
T ss_pred cCCCEEEEEeeCHHHH-HHHHHHHHCCCEEEEEcCCchhhhhhhhhcccCCHHHHHhhCCEEEEecCCchhhhhhccHHH
Confidence 4578999999999999 466543321100 0 01123221 466788999999999998 44455555 344
Q ss_pred ccccCCCCEEEEecCC--CcHHHHHhhCC
Q psy6714 197 KPVFNESNLLISVAGG--VPIKNMEQALP 223 (303)
Q Consensus 197 ~~~L~~g~IVVSiaaG--V~ie~L~~~l~ 223 (303)
...++++.++|.+.-| ++.+.|.+.|.
T Consensus 216 l~~mk~gailIN~aRG~~vd~~aL~~aL~ 244 (315)
T 3pp8_A 216 LDQLPDGAYVLNLARGVHVQEADLLAALD 244 (315)
T ss_dssp HTTSCTTEEEEECSCGGGBCHHHHHHHHH
T ss_pred HhhCCCCCEEEECCCChhhhHHHHHHHHH
Confidence 5567789999977633 34556666654
No 128
>3hg7_A D-isomer specific 2-hydroxyacid dehydrogenase FAM protein; structural genomics; 1.80A {Aeromonas salmonicida subsp}
Probab=97.83 E-value=1.4e-05 Score=75.58 Aligned_cols=93 Identities=12% Similarity=0.089 Sum_probs=59.1
Q ss_pred cCCCcEEEEcCChhhHHHHHHHHhhc----------HHHHhhC-CCeEecChHHhhcCCCEEEEeeCC-ccHHHHH-Hhh
Q psy6714 130 WNRSDKQIAGTTERGPGALIASLNIV----------SKATGTM-GAKITFDNKEVTLNSEVIILAVKP-HIVPVAL-NDI 196 (303)
Q Consensus 130 ~~~mkIgIIGlG~MG~~~La~al~r~----------~e~l~e~-Gv~v~~d~~eav~~ADIVILAVpP-~~v~~VL-~eI 196 (303)
+..++|||||+|.||. .++..++.. .+..... +.....+..+++++||+|++++|. .....++ .+.
T Consensus 138 l~g~tvGIIGlG~IG~-~vA~~l~~~G~~V~~~dr~~~~~~~~~~~~~~~~l~ell~~aDvV~l~lPlt~~T~~li~~~~ 216 (324)
T 3hg7_A 138 LKGRTLLILGTGSIGQ-HIAHTGKHFGMKVLGVSRSGRERAGFDQVYQLPALNKMLAQADVIVSVLPATRETHHLFTASR 216 (324)
T ss_dssp STTCEEEEECCSHHHH-HHHHHHHHTTCEEEEECSSCCCCTTCSEEECGGGHHHHHHTCSEEEECCCCCSSSTTSBCTTT
T ss_pred cccceEEEEEECHHHH-HHHHHHHhCCCEEEEEcCChHHhhhhhcccccCCHHHHHhhCCEEEEeCCCCHHHHHHhHHHH
Confidence 4578999999999999 465543221 1111111 111235678899999999999983 3444444 344
Q ss_pred ccccCCCCEEEEecCC--CcHHHHHhhCC
Q psy6714 197 KPVFNESNLLISVAGG--VPIKNMEQALP 223 (303)
Q Consensus 197 ~~~L~~g~IVVSiaaG--V~ie~L~~~l~ 223 (303)
...++++.+||.+.-| ++.+.|.+.|.
T Consensus 217 l~~mk~gailIN~aRG~~vde~aL~~aL~ 245 (324)
T 3hg7_A 217 FEHCKPGAILFNVGRGNAINEGDLLTALR 245 (324)
T ss_dssp TTCSCTTCEEEECSCGGGBCHHHHHHHHH
T ss_pred HhcCCCCcEEEECCCchhhCHHHHHHHHH
Confidence 4567889999987643 34456766664
No 129
>3db2_A Putative NADPH-dependent oxidoreductase; two domain protein, rossman fold, putative dehydrogenase, ST genomics; 1.70A {Desulfitobacterium hafniense dcb-2}
Probab=97.83 E-value=0.00012 Score=68.54 Aligned_cols=86 Identities=6% Similarity=0.020 Sum_probs=56.3
Q ss_pred CCcEEEEcCChhhHHHHHHHHhh------------cHHH----HhhCCCeEecChHHhh--cCCCEEEEeeCCccHHHHH
Q psy6714 132 RSDKQIAGTTERGPGALIASLNI------------VSKA----TGTMGAKITFDNKEVT--LNSEVIILAVKPHIVPVAL 193 (303)
Q Consensus 132 ~mkIgIIGlG~MG~~~La~al~r------------~~e~----l~e~Gv~v~~d~~eav--~~ADIVILAVpP~~v~~VL 193 (303)
++||||||+|.||. .++..+.. ..++ ..++|+....+..+++ .+.|+|++|+|+..-.+++
T Consensus 5 ~~~vgiiG~G~~g~-~~~~~l~~~~~~~lvav~d~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~D~V~i~tp~~~h~~~~ 83 (354)
T 3db2_A 5 PVGVAAIGLGRWAY-VMADAYTKSEKLKLVTCYSRTEDKREKFGKRYNCAGDATMEALLAREDVEMVIITVPNDKHAEVI 83 (354)
T ss_dssp CEEEEEECCSHHHH-HHHHHHTTCSSEEEEEEECSSHHHHHHHHHHHTCCCCSSHHHHHHCSSCCEEEECSCTTSHHHHH
T ss_pred cceEEEEccCHHHH-HHHHHHHhCCCcEEEEEECCCHHHHHHHHHHcCCCCcCCHHHHhcCCCCCEEEEeCChHHHHHHH
Confidence 46899999999998 45544322 2222 2356887778889988 5699999999988777776
Q ss_pred HhhccccCCCCEEEEec-CCCcHHHHHhh
Q psy6714 194 NDIKPVFNESNLLISVA-GGVPIKNMEQA 221 (303)
Q Consensus 194 ~eI~~~L~~g~IVVSia-aGV~ie~L~~~ 221 (303)
..... .|+-|+.-. -+.+.+..+++
T Consensus 84 ~~al~---~gk~vl~EKP~~~~~~~~~~l 109 (354)
T 3db2_A 84 EQCAR---SGKHIYVEKPISVSLDHAQRI 109 (354)
T ss_dssp HHHHH---TTCEEEEESSSCSSHHHHHHH
T ss_pred HHHHH---cCCEEEEccCCCCCHHHHHHH
Confidence 55432 455444322 24555555544
No 130
>2yq5_A D-isomer specific 2-hydroxyacid dehydrogenase; oxidoreductase; HET: NAD; 2.75A {Lactobacillus delbrueckii subsp} PDB: 2yq4_A*
Probab=97.80 E-value=8.3e-06 Score=77.78 Aligned_cols=92 Identities=15% Similarity=0.105 Sum_probs=58.2
Q ss_pred cCCCcEEEEcCChhhHHHHHHHHh----------hcHHHHhhCCCeEecChHHhhcCCCEEEEeeCC-ccHHHHH-Hhhc
Q psy6714 130 WNRSDKQIAGTTERGPGALIASLN----------IVSKATGTMGAKITFDNKEVTLNSEVIILAVKP-HIVPVAL-NDIK 197 (303)
Q Consensus 130 ~~~mkIgIIGlG~MG~~~La~al~----------r~~e~l~e~Gv~v~~d~~eav~~ADIVILAVpP-~~v~~VL-~eI~ 197 (303)
+..++|||||+|.||. .++..++ +..+...+.++.. .+..+++++||+|++++|. .....++ .+..
T Consensus 146 l~gktvgIiGlG~IG~-~vA~~l~~~G~~V~~~d~~~~~~~~~~~~~-~~l~ell~~aDvV~l~~Plt~~t~~li~~~~l 223 (343)
T 2yq5_A 146 IYNLTVGLIGVGHIGS-AVAEIFSAMGAKVIAYDVAYNPEFEPFLTY-TDFDTVLKEADIVSLHTPLFPSTENMIGEKQL 223 (343)
T ss_dssp GGGSEEEEECCSHHHH-HHHHHHHHTTCEEEEECSSCCGGGTTTCEE-CCHHHHHHHCSEEEECCCCCTTTTTCBCHHHH
T ss_pred cCCCeEEEEecCHHHH-HHHHHHhhCCCEEEEECCChhhhhhccccc-cCHHHHHhcCCEEEEcCCCCHHHHHHhhHHHH
Confidence 4468999999999999 4665432 1111112233433 4788999999999999983 3333333 2333
Q ss_pred cccCCCCEEEEecCC--CcHHHHHhhCC
Q psy6714 198 PVFNESNLLISVAGG--VPIKNMEQALP 223 (303)
Q Consensus 198 ~~L~~g~IVVSiaaG--V~ie~L~~~l~ 223 (303)
..++++.+||.+.-| ++.+.|.+.|.
T Consensus 224 ~~mk~gailIN~aRg~~vd~~aL~~aL~ 251 (343)
T 2yq5_A 224 KEMKKSAYLINCARGELVDTGALIKALQ 251 (343)
T ss_dssp HHSCTTCEEEECSCGGGBCHHHHHHHHH
T ss_pred hhCCCCcEEEECCCChhhhHHHHHHHHH
Confidence 456789999977633 34456666553
No 131
>2i99_A MU-crystallin homolog; thyroid hormine binding protein, oxidoreductase; HET: NDP; 2.60A {Homo sapiens}
Probab=97.79 E-value=2.3e-05 Score=73.06 Aligned_cols=74 Identities=14% Similarity=0.076 Sum_probs=50.6
Q ss_pred CCCcEEEEcCChhhHHHHHHHH------------hhcHHH---Hh-hCC--CeEecChHHhhcCCCEEEEeeCCccHHHH
Q psy6714 131 NRSDKQIAGTTERGPGALIASL------------NIVSKA---TG-TMG--AKITFDNKEVTLNSEVIILAVKPHIVPVA 192 (303)
Q Consensus 131 ~~mkIgIIGlG~MG~~~La~al------------~r~~e~---l~-e~G--v~v~~d~~eav~~ADIVILAVpP~~v~~V 192 (303)
..++|+|||+|.||.. ++..+ ++..++ +. ++| +....+..++++++|+||+|+|.. ..+
T Consensus 134 ~~~~igiIG~G~~g~~-~a~~l~~~~g~~~V~v~dr~~~~~~~l~~~~~~~~~~~~~~~e~v~~aDiVi~atp~~--~~v 210 (312)
T 2i99_A 134 SSEVLCILGAGVQAYS-HYEIFTEQFSFKEVRIWNRTKENAEKFADTVQGEVRVCSSVQEAVAGADVIITVTLAT--EPI 210 (312)
T ss_dssp TCCEEEEECCSHHHHH-HHHHHHHHCCCSEEEEECSSHHHHHHHHHHSSSCCEECSSHHHHHTTCSEEEECCCCS--SCC
T ss_pred CCcEEEEECCcHHHHH-HHHHHHHhCCCcEEEEEcCCHHHHHHHHHHhhCCeEEeCCHHHHHhcCCEEEEEeCCC--Ccc
Confidence 4678999999999995 33322 122222 22 346 777788889999999999999842 334
Q ss_pred HHhhccccCCCCEEEEe
Q psy6714 193 LNDIKPVFNESNLLISV 209 (303)
Q Consensus 193 L~eI~~~L~~g~IVVSi 209 (303)
+.. +.++++++|+++
T Consensus 211 ~~~--~~l~~g~~vi~~ 225 (312)
T 2i99_A 211 LFG--EWVKPGAHINAV 225 (312)
T ss_dssp BCG--GGSCTTCEEEEC
T ss_pred cCH--HHcCCCcEEEeC
Confidence 322 457788888765
No 132
>3d4o_A Dipicolinate synthase subunit A; NP_243269.1, structural GEN joint center for structural genomics, JCSG, protein structu initiative, PSI-2; HET: MSE TAR; 2.10A {Bacillus halodurans}
Probab=97.79 E-value=0.0001 Score=67.80 Aligned_cols=101 Identities=15% Similarity=0.191 Sum_probs=64.0
Q ss_pred cCCCcEEEEcCChhhHHHHHHHH----------hhcHH---HHhhCCCeEe--cChHHhhcCCCEEEEeeCCccHH-HHH
Q psy6714 130 WNRSDKQIAGTTERGPGALIASL----------NIVSK---ATGTMGAKIT--FDNKEVTLNSEVIILAVKPHIVP-VAL 193 (303)
Q Consensus 130 ~~~mkIgIIGlG~MG~~~La~al----------~r~~e---~l~e~Gv~v~--~d~~eav~~ADIVILAVpP~~v~-~VL 193 (303)
+..++|+|||+|.||. .++..+ ++..+ .+.+.|+... .+..++++++|+||+++|...+. +.+
T Consensus 153 l~g~~v~IiG~G~iG~-~~a~~l~~~G~~V~~~dr~~~~~~~~~~~g~~~~~~~~l~~~l~~aDvVi~~~p~~~i~~~~l 231 (293)
T 3d4o_A 153 IHGANVAVLGLGRVGM-SVARKFAALGAKVKVGARESDLLARIAEMGMEPFHISKAAQELRDVDVCINTIPALVVTANVL 231 (293)
T ss_dssp STTCEEEEECCSHHHH-HHHHHHHHTTCEEEEEESSHHHHHHHHHTTSEEEEGGGHHHHTTTCSEEEECCSSCCBCHHHH
T ss_pred CCCCEEEEEeeCHHHH-HHHHHHHhCCCEEEEEECCHHHHHHHHHCCCeecChhhHHHHhcCCCEEEECCChHHhCHHHH
Confidence 4568999999999999 455442 22222 2345687653 45677889999999999876543 333
Q ss_pred HhhccccCCCCEEEEecC---CCcHHHHHhhCCCCCceEEEecCcHHhh
Q psy6714 194 NDIKPVFNESNLLISVAG---GVPIKNMEQALPKNSRIIRAMPNTPALV 239 (303)
Q Consensus 194 ~eI~~~L~~g~IVVSiaa---GV~ie~L~~~l~~~~~VVr~mPn~p~~v 239 (303)
. .++++.++|.+.- +++.+.. +..+ ..+..+|++|..+
T Consensus 232 ~----~mk~~~~lin~ar~~~~~~~~~a-~~~G---v~~~~~~~l~~~v 272 (293)
T 3d4o_A 232 A----EMPSHTFVIDLASKPGGTDFRYA-EKRG---IKALLVPGLPGIV 272 (293)
T ss_dssp H----HSCTTCEEEECSSTTCSBCHHHH-HHHT---CEEEECCCHHHHH
T ss_pred H----hcCCCCEEEEecCCCCCCCHHHH-HHCC---CEEEECCCCCccc
Confidence 3 3567889998773 3333222 2222 2345679988765
No 133
>3evt_A Phosphoglycerate dehydrogenase; structural genomics, PSI-2, protein structure initiative; 2.20A {Lactobacillus plantarum}
Probab=97.77 E-value=1.8e-05 Score=74.89 Aligned_cols=93 Identities=15% Similarity=0.177 Sum_probs=58.6
Q ss_pred cCCCcEEEEcCChhhHHHHHHHHhhc----------HHHHhhCC-CeEecChHHhhcCCCEEEEeeCC-ccHHHHH-Hhh
Q psy6714 130 WNRSDKQIAGTTERGPGALIASLNIV----------SKATGTMG-AKITFDNKEVTLNSEVIILAVKP-HIVPVAL-NDI 196 (303)
Q Consensus 130 ~~~mkIgIIGlG~MG~~~La~al~r~----------~e~l~e~G-v~v~~d~~eav~~ADIVILAVpP-~~v~~VL-~eI 196 (303)
+..++|||||+|.||. .++..++.. .+...... .....+..+++++||+|++++|. .....++ .+.
T Consensus 135 l~gktvGIiGlG~IG~-~vA~~l~~~G~~V~~~dr~~~~~~~~~~~~~~~~l~ell~~aDvV~l~lPlt~~t~~li~~~~ 213 (324)
T 3evt_A 135 LTGQQLLIYGTGQIGQ-SLAAKASALGMHVIGVNTTGHPADHFHETVAFTATADALATANFIVNALPLTPTTHHLFSTEL 213 (324)
T ss_dssp STTCEEEEECCSHHHH-HHHHHHHHTTCEEEEEESSCCCCTTCSEEEEGGGCHHHHHHCSEEEECCCCCGGGTTCBSHHH
T ss_pred ccCCeEEEECcCHHHH-HHHHHHHhCCCEEEEECCCcchhHhHhhccccCCHHHHHhhCCEEEEcCCCchHHHHhcCHHH
Confidence 4578999999999999 466543221 11111111 11234678899999999999983 3444444 334
Q ss_pred ccccCCCCEEEEecCC--CcHHHHHhhCC
Q psy6714 197 KPVFNESNLLISVAGG--VPIKNMEQALP 223 (303)
Q Consensus 197 ~~~L~~g~IVVSiaaG--V~ie~L~~~l~ 223 (303)
...++++.+||.+.-| ++.+.|.+.|.
T Consensus 214 l~~mk~gailIN~aRG~~vd~~aL~~aL~ 242 (324)
T 3evt_A 214 FQQTKQQPMLINIGRGPAVDTTALMTALD 242 (324)
T ss_dssp HHTCCSCCEEEECSCGGGBCHHHHHHHHH
T ss_pred HhcCCCCCEEEEcCCChhhhHHHHHHHHH
Confidence 4457789999977633 45566776664
No 134
>3mz0_A Inositol 2-dehydrogenase/D-chiro-inositol 3-dehyd; MYO-inositol dehydrogenase, bsidh, oxidoreductase; HET: MSE PGE; 1.54A {Bacillus subtilis} PDB: 3nt2_A* 3nt4_A* 3nt5_A* 3nto_A* 3ntq_A* 3ntr_A*
Probab=97.75 E-value=9.4e-05 Score=69.07 Aligned_cols=86 Identities=7% Similarity=0.034 Sum_probs=55.8
Q ss_pred CCCcEEEEcCChhhHHHHHHHHh-h------------cHHH----HhhCC--CeEecChHHhhcC--CCEEEEeeCCccH
Q psy6714 131 NRSDKQIAGTTERGPGALIASLN-I------------VSKA----TGTMG--AKITFDNKEVTLN--SEVIILAVKPHIV 189 (303)
Q Consensus 131 ~~mkIgIIGlG~MG~~~La~al~-r------------~~e~----l~e~G--v~v~~d~~eav~~--ADIVILAVpP~~v 189 (303)
|++||||||+|.||.. ++..+. . ..++ .+++| .....+..+++++ .|+|++|+|+..-
T Consensus 1 M~~rigiIG~G~~g~~-~~~~l~~~~~~~~l~av~d~~~~~~~~~~~~~g~~~~~~~~~~~ll~~~~~D~V~i~tp~~~h 79 (344)
T 3mz0_A 1 MSLRIGVIGTGAIGKE-HINRITNKLSGAEIVAVTDVNQEAAQKVVEQYQLNATVYPNDDSLLADENVDAVLVTSWGPAH 79 (344)
T ss_dssp CCEEEEEECCSHHHHH-HHHHHHHTCSSEEEEEEECSSHHHHHHHHHHTTCCCEEESSHHHHHHCTTCCEEEECSCGGGH
T ss_pred CeEEEEEECccHHHHH-HHHHHHhhCCCcEEEEEEcCCHHHHHHHHHHhCCCCeeeCCHHHHhcCCCCCEEEECCCchhH
Confidence 3579999999999984 444332 1 1122 23567 5778899998875 8999999998887
Q ss_pred HHHHHhhccccCCCCEEEEec-CCCcHHHHHh
Q psy6714 190 PVALNDIKPVFNESNLLISVA-GGVPIKNMEQ 220 (303)
Q Consensus 190 ~~VL~eI~~~L~~g~IVVSia-aGV~ie~L~~ 220 (303)
.+++.... ..|+-|+.-. -+.+.+..++
T Consensus 80 ~~~~~~al---~~Gk~vl~EKP~a~~~~e~~~ 108 (344)
T 3mz0_A 80 ESSVLKAI---KAQKYVFCEKPLATTAEGCMR 108 (344)
T ss_dssp HHHHHHHH---HTTCEEEECSCSCSSHHHHHH
T ss_pred HHHHHHHH---HCCCcEEEcCCCCCCHHHHHH
Confidence 77776543 2455455321 1345544443
No 135
>2rir_A Dipicolinate synthase, A chain; structural genomics, APC1343, PSI-2, structure initiative; HET: MSE NAP; 2.79A {Bacillus subtilis}
Probab=97.75 E-value=0.00012 Score=67.45 Aligned_cols=103 Identities=16% Similarity=0.163 Sum_probs=64.6
Q ss_pred cCCCcEEEEcCChhhHHHHHHHH----------hhcHH---HHhhCCCeEe--cChHHhhcCCCEEEEeeCCccHHHHHH
Q psy6714 130 WNRSDKQIAGTTERGPGALIASL----------NIVSK---ATGTMGAKIT--FDNKEVTLNSEVIILAVKPHIVPVALN 194 (303)
Q Consensus 130 ~~~mkIgIIGlG~MG~~~La~al----------~r~~e---~l~e~Gv~v~--~d~~eav~~ADIVILAVpP~~v~~VL~ 194 (303)
+..++|+|||+|.||.. ++..+ ++..+ .+.+.|+... .+..++++++|+||+++|+..+.+-
T Consensus 155 l~g~~v~IiG~G~iG~~-~a~~l~~~G~~V~~~d~~~~~~~~~~~~g~~~~~~~~l~~~l~~aDvVi~~~p~~~i~~~-- 231 (300)
T 2rir_A 155 IHGSQVAVLGLGRTGMT-IARTFAALGANVKVGARSSAHLARITEMGLVPFHTDELKEHVKDIDICINTIPSMILNQT-- 231 (300)
T ss_dssp STTSEEEEECCSHHHHH-HHHHHHHTTCEEEEEESSHHHHHHHHHTTCEEEEGGGHHHHSTTCSEEEECCSSCCBCHH--
T ss_pred CCCCEEEEEcccHHHHH-HHHHHHHCCCEEEEEECCHHHHHHHHHCCCeEEchhhHHHHhhCCCEEEECCChhhhCHH--
Confidence 34689999999999994 44432 22222 2335677642 4667888999999999998654321
Q ss_pred hhccccCCCCEEEEecCC---CcHHHHHhhCCCCCceEEEecCcHHhhh
Q psy6714 195 DIKPVFNESNLLISVAGG---VPIKNMEQALPKNSRIIRAMPNTPALVR 240 (303)
Q Consensus 195 eI~~~L~~g~IVVSiaaG---V~ie~L~~~l~~~~~VVr~mPn~p~~v~ 240 (303)
....++++.+||.+.-| ++.+.. ...+ ..+..+||+++.+.
T Consensus 232 -~~~~mk~g~~lin~a~g~~~~~~~~a-~~~G---~~~i~~pg~~g~v~ 275 (300)
T 2rir_A 232 -VLSSMTPKTLILDLASRPGGTDFKYA-EKQG---IKALLAPGLPGIVA 275 (300)
T ss_dssp -HHTTSCTTCEEEECSSTTCSBCHHHH-HHHT---CEEEECCCHHHHHC
T ss_pred -HHHhCCCCCEEEEEeCCCCCcCHHHH-HHCC---CEEEECCCCCCcHH
Confidence 22346678899987653 333211 1111 23456798887664
No 136
>1a5z_A L-lactate dehydrogenase; oxidoreductase, glycolysis, hyperthermophiles, thermotoga MA protein stability; HET: FBP NAD; 2.10A {Thermotoga maritima} SCOP: c.2.1.5 d.162.1.1
Probab=97.75 E-value=4.2e-05 Score=71.52 Aligned_cols=97 Identities=14% Similarity=0.106 Sum_probs=58.5
Q ss_pred CcEEEEcCChhhHHHHHHHH-h-----------hcHHHHh------hC------CCeEecChHHhhcCCCEEEEeeCCcc
Q psy6714 133 SDKQIAGTTERGPGALIASL-N-----------IVSKATG------TM------GAKITFDNKEVTLNSEVIILAVKPHI 188 (303)
Q Consensus 133 mkIgIIGlG~MG~~~La~al-~-----------r~~e~l~------e~------Gv~v~~d~~eav~~ADIVILAVpP~~ 188 (303)
|||+|||+|.||.+ ++..+ . +..+++. .. ...+..+..+++++||+||+|++...
T Consensus 1 mkI~VIGaG~~G~~-la~~l~~~g~~~~V~l~D~~~~~~~~~~~~l~~~~~~~~~~~i~~~d~~~~~~aDvViiav~~~~ 79 (319)
T 1a5z_A 1 MKIGIVGLGRVGSS-TAFALLMKGFAREMVLIDVDKKRAEGDALDLIHGTPFTRRANIYAGDYADLKGSDVVIVAAGVPQ 79 (319)
T ss_dssp CEEEEECCSHHHHH-HHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHHHGGGSCCCEEEECCGGGGTTCSEEEECCCCCC
T ss_pred CEEEEECCCHHHHH-HHHHHHhCCCCCeEEEEeCChHHHHHHHHHHHhhhhhcCCcEEEeCCHHHhCCCCEEEEccCCCC
Confidence 78999999999995 44331 1 1111111 00 22332223567889999999998533
Q ss_pred ----------------HHHHHHhhccccCCCCEEEEecCCCcHH--HHHhhC--CCCCceEEEe
Q psy6714 189 ----------------VPVALNDIKPVFNESNLLISVAGGVPIK--NMEQAL--PKNSRIIRAM 232 (303)
Q Consensus 189 ----------------v~~VL~eI~~~L~~g~IVVSiaaGV~ie--~L~~~l--~~~~~VVr~m 232 (303)
+.++++.+.++. ++.+||...+++... .+.+.. +. .+++.+.
T Consensus 80 ~~g~~r~dl~~~n~~i~~~i~~~i~~~~-~~~~ii~~tNp~~~~~~~~~~~~~~~~-~rviG~~ 141 (319)
T 1a5z_A 80 KPGETRLQLLGRNARVMKEIARNVSKYA-PDSIVIVVTNPVDVLTYFFLKESGMDP-RKVFGSG 141 (319)
T ss_dssp CSSCCHHHHHHHHHHHHHHHHHHHHHHC-TTCEEEECSSSHHHHHHHHHHHHTCCT-TTEEECT
T ss_pred CCCCCHHHHHHHHHHHHHHHHHHHHhhC-CCeEEEEeCCcHHHHHHHHHHHhCCCh-hhEEeeC
Confidence 567777787764 666777788887763 233332 42 4666653
No 137
>3vtf_A UDP-glucose 6-dehydrogenase; two discrete alpha/beta domains, oxidoreducta; HET: UPG; 2.00A {Pyrobaculum islandicum}
Probab=97.74 E-value=0.00016 Score=71.32 Aligned_cols=140 Identities=14% Similarity=0.191 Sum_probs=78.0
Q ss_pred CCCcEEEEcCChhhHHHHHHHH----------hhcHH-------------------HH---hhCC-CeEecChHHhhcCC
Q psy6714 131 NRSDKQIAGTTERGPGALIASL----------NIVSK-------------------AT---GTMG-AKITFDNKEVTLNS 177 (303)
Q Consensus 131 ~~mkIgIIGlG~MG~~~La~al----------~r~~e-------------------~l---~e~G-v~v~~d~~eav~~A 177 (303)
.|.+|+|||+|-||.+ ++..+ +.+.+ .+ .+.| +..+++..++++.|
T Consensus 20 ~m~~IaViGlGYVGLp-~A~~~A~~G~~V~g~Did~~kV~~ln~G~~pi~Epgl~ell~~~~~~g~l~~tt~~~~ai~~a 98 (444)
T 3vtf_A 20 HMASLSVLGLGYVGVV-HAVGFALLGHRVVGYDVNPSIVERLRAGRPHIYEPGLEEALGRALSSGRLSFAESAEEAVAAT 98 (444)
T ss_dssp CCCEEEEECCSHHHHH-HHHHHHHHTCEEEEECSCHHHHHHHHTTCCSSCCTTHHHHHHHHHHTTCEEECSSHHHHHHTS
T ss_pred CCCEEEEEccCHHHHH-HHHHHHhCCCcEEEEECCHHHHHHHHCCCCCCCCCCHHHHHHHHHHcCCeeEEcCHHHHHhcC
Confidence 4779999999999985 33221 11111 11 1223 45677888899999
Q ss_pred CEEEEeeC-Cc---------cHHHHHHhhccccC---CCCEEE--Eec-CCCcHHHHHhhC---CCCCc-eEEEecC---
Q psy6714 178 EVIILAVK-PH---------IVPVALNDIKPVFN---ESNLLI--SVA-GGVPIKNMEQAL---PKNSR-IIRAMPN--- 234 (303)
Q Consensus 178 DIVILAVp-P~---------~v~~VL~eI~~~L~---~g~IVV--Sia-aGV~ie~L~~~l---~~~~~-VVr~mPn--- 234 (303)
|++|+||+ |. .+..+++.|.++++ ++++|| |++ -|.+-+.+...+ ..+.. .+.+-|-
T Consensus 99 d~~~I~VpTP~~~d~~~Dl~~v~~a~~~I~~~l~~~~~g~lVV~eSTVppGtte~~~~~~l~~~~~~~~f~v~~~PErl~ 178 (444)
T 3vtf_A 99 DATFIAVGTPPAPDGSADLRYVEAAARAVGRGIRAKGRWHLVVVKSTVPPGTTEGLVARAVAEEAGGVKFSVASNPEFLR 178 (444)
T ss_dssp SEEEECCCCCBCTTSSBCCHHHHHHHHHHHHHHHHHCSCCEEEECSCCCTTTTTTHHHHHHHTTTTTCCCEEEECCCCCC
T ss_pred CceEEEecCCCCCCCCCCcHHHHHHHHHHHHHHhhcCCCeEEEEeCCCCCchHHHHHHHHHHHhCCCCCceeecCccccc
Confidence 99999996 32 46777777777664 467777 444 344433222222 11122 2333232
Q ss_pred --cHH-hhhCCcEEEEeCCCCCHHHHHHHHHHHHhcCCcEEc
Q psy6714 235 --TPA-LVRQGASVFVRGSSASDQDAQTVINLFKSVGTCEEV 273 (303)
Q Consensus 235 --~p~-~v~~G~til~~g~~~~~e~~e~V~~Lfs~iG~~v~v 273 (303)
... .+..-.-++..+. ++...+.+..+++.++..+.+
T Consensus 179 eG~a~~d~~~~~riViG~~--~~~a~~~~~~ly~~~~~~~~~ 218 (444)
T 3vtf_A 179 EGSALEDFFKPDRIVIGAG--DERAASFLLDVYKAVDAPKLV 218 (444)
T ss_dssp TTSHHHHHHSCSCEEEEES--SHHHHHHHHHHTTTSCSCEEE
T ss_pred CCccccccccCCcEEEcCC--CHHHHHHHHHHHhccCCCEEE
Confidence 111 1111112333332 567778889999888765443
No 138
>1j4a_A D-LDH, D-lactate dehydrogenase; NAD-dependent dehydrogenase, reversible interconversion of pyruvate INTO D-lactate; 1.90A {Lactobacillus delbrueckii subsp} SCOP: c.2.1.4 c.23.12.1 PDB: 1j49_A* 2dld_A*
Probab=97.73 E-value=7.9e-06 Score=77.25 Aligned_cols=92 Identities=12% Similarity=0.127 Sum_probs=58.6
Q ss_pred cCCCcEEEEcCChhhHHHHHHHHhh----------cHH-HHhhCCCeEecChHHhhcCCCEEEEeeCCc-cHHHHH-Hhh
Q psy6714 130 WNRSDKQIAGTTERGPGALIASLNI----------VSK-ATGTMGAKITFDNKEVTLNSEVIILAVKPH-IVPVAL-NDI 196 (303)
Q Consensus 130 ~~~mkIgIIGlG~MG~~~La~al~r----------~~e-~l~e~Gv~v~~d~~eav~~ADIVILAVpP~-~v~~VL-~eI 196 (303)
+..++|||||+|.||. .++..+.. ..+ .+.+ ++....+..+++++||+|++++|.. ....++ ++.
T Consensus 144 l~g~~vgIiG~G~IG~-~~A~~l~~~G~~V~~~d~~~~~~~~~-~~~~~~~l~ell~~aDvV~l~~p~~~~t~~li~~~~ 221 (333)
T 1j4a_A 144 VRDQVVGVVGTGHIGQ-VFMQIMEGFGAKVITYDIFRNPELEK-KGYYVDSLDDLYKQADVISLHVPDVPANVHMINDES 221 (333)
T ss_dssp GGGSEEEEECCSHHHH-HHHHHHHHTTCEEEEECSSCCHHHHH-TTCBCSCHHHHHHHCSEEEECSCCCGGGTTCBSHHH
T ss_pred CCCCEEEEEccCHHHH-HHHHHHHHCCCEEEEECCCcchhHHh-hCeecCCHHHHHhhCCEEEEcCCCcHHHHHHHhHHH
Confidence 4468999999999999 46554321 111 1222 2443347788899999999999843 344444 223
Q ss_pred ccccCCCCEEEEecCC--CcHHHHHhhCC
Q psy6714 197 KPVFNESNLLISVAGG--VPIKNMEQALP 223 (303)
Q Consensus 197 ~~~L~~g~IVVSiaaG--V~ie~L~~~l~ 223 (303)
...++++.++|.+.-| ++.+.|.+.+.
T Consensus 222 l~~mk~ga~lIn~arg~~vd~~aL~~aL~ 250 (333)
T 1j4a_A 222 IAKMKQDVVIVNVSRGPLVDTDAVIRGLD 250 (333)
T ss_dssp HHHSCTTEEEEECSCGGGBCHHHHHHHHH
T ss_pred HhhCCCCcEEEECCCCcccCHHHHHHHHH
Confidence 3456788899977644 34566766664
No 139
>3uuw_A Putative oxidoreductase with NAD(P)-binding rossm domain; structural genomics, center for structural genomics of infec diseases, csgid; HET: 1PE PGE; 1.63A {Clostridium difficile}
Probab=97.72 E-value=9.8e-05 Score=67.79 Aligned_cols=86 Identities=7% Similarity=-0.067 Sum_probs=56.0
Q ss_pred CCcEEEEcCChhhHHHHHHHHh------------hcHHH----HhhCCCeEecChHHhhcCCCEEEEeeCCccHHHHHHh
Q psy6714 132 RSDKQIAGTTERGPGALIASLN------------IVSKA----TGTMGAKITFDNKEVTLNSEVIILAVKPHIVPVALND 195 (303)
Q Consensus 132 ~mkIgIIGlG~MG~~~La~al~------------r~~e~----l~e~Gv~v~~d~~eav~~ADIVILAVpP~~v~~VL~e 195 (303)
++||||||+|.||...++..+. ++.++ ..++|+....+.+++++++|+|++|+|+..-.+++..
T Consensus 6 ~~~igiIG~G~~g~~~~~~~l~~~~~~~l~av~d~~~~~~~~~a~~~~~~~~~~~~~ll~~~D~V~i~tp~~~h~~~~~~ 85 (308)
T 3uuw_A 6 NIKMGMIGLGSIAQKAYLPILTKSERFEFVGAFTPNKVKREKICSDYRIMPFDSIESLAKKCDCIFLHSSTETHYEIIKI 85 (308)
T ss_dssp CCEEEEECCSHHHHHHTHHHHTSCSSSEEEEEECSCHHHHHHHHHHHTCCBCSCHHHHHTTCSEEEECCCGGGHHHHHHH
T ss_pred cCcEEEEecCHHHHHHHHHHHHhCCCeEEEEEECCCHHHHHHHHHHcCCCCcCCHHHHHhcCCEEEEeCCcHhHHHHHHH
Confidence 5789999999999842444322 12222 2356776678888998899999999998888877765
Q ss_pred hccccCCCCEEEEe-cCCCcHHHHHh
Q psy6714 196 IKPVFNESNLLISV-AGGVPIKNMEQ 220 (303)
Q Consensus 196 I~~~L~~g~IVVSi-aaGV~ie~L~~ 220 (303)
... .|+-|+.- --+.+.+..++
T Consensus 86 al~---~gk~vl~EKP~~~~~~~~~~ 108 (308)
T 3uuw_A 86 LLN---LGVHVYVDKPLASTVSQGEE 108 (308)
T ss_dssp HHH---TTCEEEECSSSSSSHHHHHH
T ss_pred HHH---CCCcEEEcCCCCCCHHHHHH
Confidence 433 45544421 12345544443
No 140
>3cea_A MYO-inositol 2-dehydrogenase; NP_786804.1, oxidoreductase FA NAD-binding rossmann fold, structural genomics; HET: NAD; 2.40A {Lactobacillus plantarum WCFS1}
Probab=97.72 E-value=0.00029 Score=65.33 Aligned_cols=72 Identities=15% Similarity=0.092 Sum_probs=49.6
Q ss_pred CCcEEEEcCChhhHHHHHHHHh-h------------cHHH----HhhCCC-eEecChHHhhc--CCCEEEEeeCCccHHH
Q psy6714 132 RSDKQIAGTTERGPGALIASLN-I------------VSKA----TGTMGA-KITFDNKEVTL--NSEVIILAVKPHIVPV 191 (303)
Q Consensus 132 ~mkIgIIGlG~MG~~~La~al~-r------------~~e~----l~e~Gv-~v~~d~~eav~--~ADIVILAVpP~~v~~ 191 (303)
++||||||+|.||. .++..+. . ..++ .+++|+ .+..+..++++ ++|+|++|+|+....+
T Consensus 8 ~~~v~iiG~G~ig~-~~~~~l~~~~~~~~~vav~d~~~~~~~~~a~~~g~~~~~~~~~~~l~~~~~D~V~i~tp~~~h~~ 86 (346)
T 3cea_A 8 PLRAAIIGLGRLGE-RHARHLVNKIQGVKLVAACALDSNQLEWAKNELGVETTYTNYKDMIDTENIDAIFIVAPTPFHPE 86 (346)
T ss_dssp CEEEEEECCSTTHH-HHHHHHHHTCSSEEEEEEECSCHHHHHHHHHTTCCSEEESCHHHHHTTSCCSEEEECSCGGGHHH
T ss_pred cceEEEEcCCHHHH-HHHHHHHhcCCCcEEEEEecCCHHHHHHHHHHhCCCcccCCHHHHhcCCCCCEEEEeCChHhHHH
Confidence 68999999999998 3443332 1 1122 234687 67788888886 6999999999887777
Q ss_pred HHHhhccccCCCCEEE
Q psy6714 192 ALNDIKPVFNESNLLI 207 (303)
Q Consensus 192 VL~eI~~~L~~g~IVV 207 (303)
++.... ..|+.|+
T Consensus 87 ~~~~al---~~G~~v~ 99 (346)
T 3cea_A 87 MTIYAM---NAGLNVF 99 (346)
T ss_dssp HHHHHH---HTTCEEE
T ss_pred HHHHHH---HCCCEEE
Confidence 765543 3455555
No 141
>1xea_A Oxidoreductase, GFO/IDH/MOCA family; structural genomics, protein structure initiative, NYSGXRC, VCA1048, GFO/IDH/MOCA family oxidoreductase; 2.65A {Vibrio cholerae} SCOP: c.2.1.3 d.81.1.5
Probab=97.70 E-value=0.00018 Score=66.61 Aligned_cols=65 Identities=9% Similarity=0.105 Sum_probs=43.7
Q ss_pred CCcEEEEcCChhhHHHHHHHHhh-----------cHHH----HhhCCCeE-ecChHHhh-cCCCEEEEeeCCccHHHHHH
Q psy6714 132 RSDKQIAGTTERGPGALIASLNI-----------VSKA----TGTMGAKI-TFDNKEVT-LNSEVIILAVKPHIVPVALN 194 (303)
Q Consensus 132 ~mkIgIIGlG~MG~~~La~al~r-----------~~e~----l~e~Gv~v-~~d~~eav-~~ADIVILAVpP~~v~~VL~ 194 (303)
+|||||||+|.||...++..+.. ..++ ..++|+.. ..+..+++ .++|+|++|+|+....+++.
T Consensus 2 ~~~igiIG~G~ig~~~~~~~l~~~~~~~l~v~d~~~~~~~~~a~~~g~~~~~~~~~~~l~~~~D~V~i~tp~~~h~~~~~ 81 (323)
T 1xea_A 2 SLKIAMIGLGDIAQKAYLPVLAQWPDIELVLCTRNPKVLGTLATRYRVSATCTDYRDVLQYGVDAVMIHAATDVHSTLAA 81 (323)
T ss_dssp CEEEEEECCCHHHHHTHHHHHTTSTTEEEEEECSCHHHHHHHHHHTTCCCCCSSTTGGGGGCCSEEEECSCGGGHHHHHH
T ss_pred CcEEEEECCCHHHHHHHHHHHHhCCCceEEEEeCCHHHHHHHHHHcCCCccccCHHHHhhcCCCEEEEECCchhHHHHHH
Confidence 57999999999997324433221 1222 23567653 45555666 68999999999988877775
Q ss_pred hh
Q psy6714 195 DI 196 (303)
Q Consensus 195 eI 196 (303)
..
T Consensus 82 ~a 83 (323)
T 1xea_A 82 FF 83 (323)
T ss_dssp HH
T ss_pred HH
Confidence 54
No 142
>2dc1_A L-aspartate dehydrogenase; NAD, oxidoreductase; HET: CIT NAD; 1.90A {Archaeoglobus fulgidus}
Probab=97.70 E-value=5.2e-05 Score=67.38 Aligned_cols=75 Identities=16% Similarity=0.040 Sum_probs=47.5
Q ss_pred CcEEEEcCChhhHHHHHHHHhhcHHHHh---hCC--C-eEecChHHhh-cCCCEEEEeeCCccHHHHHHhhccccCCCCE
Q psy6714 133 SDKQIAGTTERGPGALIASLNIVSKATG---TMG--A-KITFDNKEVT-LNSEVIILAVKPHIVPVALNDIKPVFNESNL 205 (303)
Q Consensus 133 mkIgIIGlG~MG~~~La~al~r~~e~l~---e~G--v-~v~~d~~eav-~~ADIVILAVpP~~v~~VL~eI~~~L~~g~I 205 (303)
|||||||+|.||.. ++..+....-.+. ... . ....+..+++ .++|+||+|++++...+++... +..|+.
T Consensus 1 m~vgiIG~G~mG~~-~~~~l~~~g~~lv~v~d~~~~~~~~~~~~~~l~~~~~DvVv~~~~~~~~~~~~~~~---l~~G~~ 76 (236)
T 2dc1_A 1 MLVGLIGYGAIGKF-LAEWLERNGFEIAAILDVRGEHEKMVRGIDEFLQREMDVAVEAASQQAVKDYAEKI---LKAGID 76 (236)
T ss_dssp CEEEEECCSHHHHH-HHHHHHHTTCEEEEEECSSCCCTTEESSHHHHTTSCCSEEEECSCHHHHHHHHHHH---HHTTCE
T ss_pred CEEEEECCCHHHHH-HHHHHhcCCCEEEEEEecCcchhhhcCCHHHHhcCCCCEEEECCCHHHHHHHHHHH---HHCCCc
Confidence 68999999999995 4433221100000 000 0 0345778888 6899999999988877777543 346777
Q ss_pred EEEecC
Q psy6714 206 LISVAG 211 (303)
Q Consensus 206 VVSiaa 211 (303)
||....
T Consensus 77 vv~~~~ 82 (236)
T 2dc1_A 77 LIVLST 82 (236)
T ss_dssp EEESCG
T ss_pred EEEECc
Confidence 775543
No 143
>2d5c_A AROE, shikimate 5-dehydrogenase; substrate, dimer, structural genomics, NPPSFA, Na project on protein structural and functional analyses; HET: SKM; 1.65A {Thermus thermophilus} PDB: 1wxd_A* 2cy0_A* 2ev9_A*
Probab=97.69 E-value=1.9e-05 Score=71.43 Aligned_cols=105 Identities=13% Similarity=0.185 Sum_probs=64.4
Q ss_pred CCCcEEEEcCChhhHHHHHHHH----------hhcHHH---H-hhCCCeEecChHHhhcCCCEEEEeeCCccHH---HHH
Q psy6714 131 NRSDKQIAGTTERGPGALIASL----------NIVSKA---T-GTMGAKITFDNKEVTLNSEVIILAVKPHIVP---VAL 193 (303)
Q Consensus 131 ~~mkIgIIGlG~MG~~~La~al----------~r~~e~---l-~e~Gv~v~~d~~eav~~ADIVILAVpP~~v~---~VL 193 (303)
.. +|+|||+|.||.+ ++..+ ++..++ + .++|.. ..+..++ +++|+||+|+|+.... .++
T Consensus 116 ~~-~v~iiG~G~~g~~-~a~~l~~~g~~v~v~~r~~~~~~~l~~~~~~~-~~~~~~~-~~~Divi~~tp~~~~~~~~~~l 191 (263)
T 2d5c_A 116 KG-PALVLGAGGAGRA-VAFALREAGLEVWVWNRTPQRALALAEEFGLR-AVPLEKA-REARLLVNATRVGLEDPSASPL 191 (263)
T ss_dssp CS-CEEEECCSHHHHH-HHHHHHHTTCCEEEECSSHHHHHHHHHHHTCE-ECCGGGG-GGCSEEEECSSTTTTCTTCCSS
T ss_pred CC-eEEEECCcHHHHH-HHHHHHHCCCEEEEEECCHHHHHHHHHHhccc-hhhHhhc-cCCCEEEEccCCCCCCCCCCCC
Confidence 35 8999999999994 54432 222222 2 234655 4566777 8999999999977432 222
Q ss_pred HhhccccCCCCEEEEecCCCcHHHHHhhCCCCCceEEEecCcHHhhhCCc
Q psy6714 194 NDIKPVFNESNLLISVAGGVPIKNMEQALPKNSRIIRAMPNTPALVRQGA 243 (303)
Q Consensus 194 ~eI~~~L~~g~IVVSiaaGV~ie~L~~~l~~~~~VVr~mPn~p~~v~~G~ 243 (303)
. .+.++++++|+++..+.....+.+.+.. ..+++++++++.++++.
T Consensus 192 ~--~~~l~~g~~viD~~~~p~~t~l~~~a~~--~g~~~v~g~~mlv~q~~ 237 (263)
T 2d5c_A 192 P--AELFPEEGAAVDLVYRPLWTRFLREAKA--KGLKVQTGLPMLAWQGA 237 (263)
T ss_dssp C--GGGSCSSSEEEESCCSSSSCHHHHHHHH--TTCEEECSHHHHHHHHH
T ss_pred C--HHHcCCCCEEEEeecCCcccHHHHHHHH--CcCEEECcHHHHHHHHH
Confidence 1 3456788888876543211124333321 23478899998887654
No 144
>3ohs_X Trans-1,2-dihydrobenzene-1,2-DIOL dehydrogenase; dimeric dihydrodiol dehydrogenase, MDD, oxidoreductase; 1.90A {Macaca fascicularis} PDB: 2o48_X 2poq_X* 2o4u_X
Probab=97.67 E-value=0.00032 Score=65.10 Aligned_cols=87 Identities=13% Similarity=-0.002 Sum_probs=55.8
Q ss_pred CCCcEEEEcCChhhHHHHHHHHhh--------------cHHH----HhhCCC-eEecChHHhhc--CCCEEEEeeCCccH
Q psy6714 131 NRSDKQIAGTTERGPGALIASLNI--------------VSKA----TGTMGA-KITFDNKEVTL--NSEVIILAVKPHIV 189 (303)
Q Consensus 131 ~~mkIgIIGlG~MG~~~La~al~r--------------~~e~----l~e~Gv-~v~~d~~eav~--~ADIVILAVpP~~v 189 (303)
|++||||||+|.||.. ++..+.. ..++ .+++|+ .+..|.+++++ +.|+|++|+|+..-
T Consensus 1 M~~rigiiG~G~ig~~-~~~~l~~~~~~~~~l~av~d~~~~~a~~~a~~~~~~~~~~~~~~ll~~~~vD~V~i~tp~~~H 79 (334)
T 3ohs_X 1 MALRWGIVSVGLISSD-FTAVLQTLPRSEHQVVAVAARDLSRAKEFAQKHDIPKAYGSYEELAKDPNVEVAYVGTQHPQH 79 (334)
T ss_dssp -CEEEEEECCSHHHHH-HHHHHTTSCTTTEEEEEEECSSHHHHHHHHHHHTCSCEESSHHHHHHCTTCCEEEECCCGGGH
T ss_pred CccEEEEECchHHHHH-HHHHHHhCCCCCeEEEEEEcCCHHHHHHHHHHcCCCcccCCHHHHhcCCCCCEEEECCCcHHH
Confidence 3579999999999994 5444321 1122 235677 57788999887 69999999998877
Q ss_pred HHHHHhhccccCCCCEEEEec-CCCcHHHHHhh
Q psy6714 190 PVALNDIKPVFNESNLLISVA-GGVPIKNMEQA 221 (303)
Q Consensus 190 ~~VL~eI~~~L~~g~IVVSia-aGV~ie~L~~~ 221 (303)
.+++.... ..|+-|+.-. -..+.+..+++
T Consensus 80 ~~~~~~al---~~GkhVl~EKP~a~~~~e~~~l 109 (334)
T 3ohs_X 80 KAAVMLCL---AAGKAVLCEKPMGVNAAEVREM 109 (334)
T ss_dssp HHHHHHHH---HTTCEEEEESSSSSSHHHHHHH
T ss_pred HHHHHHHH---hcCCEEEEECCCCCCHHHHHHH
Confidence 77765543 2455555321 13455555544
No 145
>1sc6_A PGDH, D-3-phosphoglycerate dehydrogenase; allosteric regulation phosphoglycerate dehydrogenase PGDH, oxidoreductase; HET: NAD; 2.09A {Escherichia coli} SCOP: c.2.1.4 c.23.12.1 d.58.18.1 PDB: 1psd_A* 1yba_A* 2p9c_A* 2p9e_A* 2pa3_A* 2p9g_A*
Probab=97.65 E-value=2.5e-05 Score=76.01 Aligned_cols=94 Identities=19% Similarity=0.184 Sum_probs=61.1
Q ss_pred cCCCcEEEEcCChhhHHHHHHHHhhcH--------HHHhhCC-CeEecChHHhhcCCCEEEEeeCCc-cHHHHH-Hhhcc
Q psy6714 130 WNRSDKQIAGTTERGPGALIASLNIVS--------KATGTMG-AKITFDNKEVTLNSEVIILAVKPH-IVPVAL-NDIKP 198 (303)
Q Consensus 130 ~~~mkIgIIGlG~MG~~~La~al~r~~--------e~l~e~G-v~v~~d~~eav~~ADIVILAVpP~-~v~~VL-~eI~~ 198 (303)
+..++|||||+|.||. .++..+.... ......| +....+..+++++||+|++++|.. ....++ ++...
T Consensus 143 l~gktlGiIGlG~IG~-~vA~~l~~~G~~V~~~d~~~~~~~~~~~~~~~l~ell~~aDvV~l~~P~t~~t~~li~~~~l~ 221 (404)
T 1sc6_A 143 ARGKKLGIIGYGHIGT-QLGILAESLGMYVYFYDIENKLPLGNATQVQHLSDLLNMSDVVSLHVPENPSTKNMMGAKEIS 221 (404)
T ss_dssp STTCEEEEECCSHHHH-HHHHHHHHTTCEEEEECSSCCCCCTTCEECSCHHHHHHHCSEEEECCCSSTTTTTCBCHHHHH
T ss_pred cCCCEEEEEeECHHHH-HHHHHHHHCCCEEEEEcCCchhccCCceecCCHHHHHhcCCEEEEccCCChHHHHHhhHHHHh
Confidence 4578999999999999 4655432211 0001223 555567889999999999999854 444444 23344
Q ss_pred ccCCCCEEEEecCC--CcHHHHHhhCCC
Q psy6714 199 VFNESNLLISVAGG--VPIKNMEQALPK 224 (303)
Q Consensus 199 ~L~~g~IVVSiaaG--V~ie~L~~~l~~ 224 (303)
.++++.++|.+.-| ++.+.|.+.+..
T Consensus 222 ~mk~ga~lIN~aRg~~vd~~aL~~aL~~ 249 (404)
T 1sc6_A 222 LMKPGSLLINASRGTVVDIPALADALAS 249 (404)
T ss_dssp HSCTTEEEEECSCSSSBCHHHHHHHHHT
T ss_pred hcCCCeEEEECCCChHHhHHHHHHHHHc
Confidence 57788999977644 344567776653
No 146
>3k5p_A D-3-phosphoglycerate dehydrogenase; niaid, ssgcid, seattle structural genomics center for infect disease, brucellosis; 2.15A {Brucella melitensis biovar abortus}
Probab=97.64 E-value=2.7e-05 Score=76.21 Aligned_cols=94 Identities=16% Similarity=0.141 Sum_probs=59.2
Q ss_pred cCCCcEEEEcCChhhHHHHHHHHhhcH---------HHHhhCCCeEecChHHhhcCCCEEEEeeCC-ccHHHHH-Hhhcc
Q psy6714 130 WNRSDKQIAGTTERGPGALIASLNIVS---------KATGTMGAKITFDNKEVTLNSEVIILAVKP-HIVPVAL-NDIKP 198 (303)
Q Consensus 130 ~~~mkIgIIGlG~MG~~~La~al~r~~---------e~l~e~Gv~v~~d~~eav~~ADIVILAVpP-~~v~~VL-~eI~~ 198 (303)
+..++|||||+|.||. .++..+.... ......++....+..+++++||+|++++|. .....++ .+...
T Consensus 154 l~gktvGIIGlG~IG~-~vA~~l~~~G~~V~~yd~~~~~~~~~~~~~~sl~ell~~aDvV~lhvPlt~~T~~li~~~~l~ 232 (416)
T 3k5p_A 154 VRGKTLGIVGYGNIGS-QVGNLAESLGMTVRYYDTSDKLQYGNVKPAASLDELLKTSDVVSLHVPSSKSTSKLITEAKLR 232 (416)
T ss_dssp STTCEEEEECCSHHHH-HHHHHHHHTTCEEEEECTTCCCCBTTBEECSSHHHHHHHCSEEEECCCC-----CCBCHHHHH
T ss_pred CCCCEEEEEeeCHHHH-HHHHHHHHCCCEEEEECCcchhcccCcEecCCHHHHHhhCCEEEEeCCCCHHHhhhcCHHHHh
Confidence 4568999999999999 4655432211 011112344556888999999999999984 3344443 23334
Q ss_pred ccCCCCEEEEecCC--CcHHHHHhhCCC
Q psy6714 199 VFNESNLLISVAGG--VPIKNMEQALPK 224 (303)
Q Consensus 199 ~L~~g~IVVSiaaG--V~ie~L~~~l~~ 224 (303)
.++++.++|.+.-| ++.+.|.+.|..
T Consensus 233 ~mk~gailIN~aRG~vvd~~aL~~aL~~ 260 (416)
T 3k5p_A 233 KMKKGAFLINNARGSDVDLEALAKVLQE 260 (416)
T ss_dssp HSCTTEEEEECSCTTSBCHHHHHHHHHT
T ss_pred hCCCCcEEEECCCChhhhHHHHHHHHHc
Confidence 56789999987643 345667776653
No 147
>1h6d_A Precursor form of glucose-fructose oxidoreductase; protein translocation, periplasmic oxidoreductase, signal peptide, ligand binding,; HET: NDP; 2.05A {Zymomonas mobilis} SCOP: c.2.1.3 d.81.1.5 PDB: 1h6b_A* 1h6a_A* 1h6c_A* 1ryd_A* 1rye_A* 1ofg_A* 1evj_A*
Probab=97.63 E-value=0.00051 Score=66.69 Aligned_cols=87 Identities=5% Similarity=0.048 Sum_probs=53.8
Q ss_pred CCcEEEEcCChhhHHHHHHHHh------------hcHHH----HhhCCCe-----EecChHHhhc--CCCEEEEeeCCcc
Q psy6714 132 RSDKQIAGTTERGPGALIASLN------------IVSKA----TGTMGAK-----ITFDNKEVTL--NSEVIILAVKPHI 188 (303)
Q Consensus 132 ~mkIgIIGlG~MG~~~La~al~------------r~~e~----l~e~Gv~-----v~~d~~eav~--~ADIVILAVpP~~ 188 (303)
++||||||+|.||...++..+. ...++ ..++|+. +..|..++++ +.|+|++|+|+..
T Consensus 83 ~irigiIG~G~~g~~~~~~~l~~~~~~~lvav~d~~~~~~~~~a~~~g~~~~~~~~~~~~~~ll~~~~vD~V~iatp~~~ 162 (433)
T 1h6d_A 83 RFGYAIVGLGKYALNQILPGFAGCQHSRIEALVSGNAEKAKIVAAEYGVDPRKIYDYSNFDKIAKDPKIDAVYIILPNSL 162 (433)
T ss_dssp CEEEEEECCSHHHHHTHHHHTTTCSSEEEEEEECSCHHHHHHHHHHTTCCGGGEECSSSGGGGGGCTTCCEEEECSCGGG
T ss_pred ceEEEEECCcHHHHHHHHHHHhhCCCcEEEEEEcCCHHHHHHHHHHhCCCcccccccCCHHHHhcCCCCCEEEEcCCchh
Confidence 5799999999999622443321 11222 2345664 4677888886 7999999999888
Q ss_pred HHHHHHhhccccCCCCEEEEec-CCCcHHHHHhh
Q psy6714 189 VPVALNDIKPVFNESNLLISVA-GGVPIKNMEQA 221 (303)
Q Consensus 189 v~~VL~eI~~~L~~g~IVVSia-aGV~ie~L~~~ 221 (303)
..+++.... ..|+-|+.-. -+.+.+..+++
T Consensus 163 h~~~~~~al---~aGk~Vl~EKPla~~~~e~~~l 193 (433)
T 1h6d_A 163 HAEFAIRAF---KAGKHVMCEKPMATSVADCQRM 193 (433)
T ss_dssp HHHHHHHHH---HTTCEEEECSSCCSSHHHHHHH
T ss_pred HHHHHHHHH---HCCCcEEEcCCCCCCHHHHHHH
Confidence 777776543 2455444321 23455544443
No 148
>3u62_A Shikimate dehydrogenase; shikimate pathway, oxidoreductase; 1.45A {Thermotoga maritima}
Probab=97.61 E-value=9.9e-06 Score=73.93 Aligned_cols=106 Identities=9% Similarity=0.002 Sum_probs=67.0
Q ss_pred cEEEEcCChhhHHHHHHHH-----------hhcHHHHhh----CCCeEecChHHhhcCCCEEEEeeCCccHHHHHHhh-c
Q psy6714 134 DKQIAGTTERGPGALIASL-----------NIVSKATGT----MGAKITFDNKEVTLNSEVIILAVKPHIVPVALNDI-K 197 (303)
Q Consensus 134 kIgIIGlG~MG~~~La~al-----------~r~~e~l~e----~Gv~v~~d~~eav~~ADIVILAVpP~~v~~VL~eI-~ 197 (303)
+++|||+|.||.+ ++..+ +++.+++.+ ++.....+..++++++|+||.|+|...-.+. ..+ .
T Consensus 110 ~vliiGaGg~a~a-i~~~L~~~G~~~I~v~nR~~~ka~~la~~~~~~~~~~~~~~~~~aDiVInatp~gm~p~~-~~i~~ 187 (253)
T 3u62_A 110 PVVVVGAGGAARA-VIYALLQMGVKDIWVVNRTIERAKALDFPVKIFSLDQLDEVVKKAKSLFNTTSVGMKGEE-LPVSD 187 (253)
T ss_dssp SEEEECCSHHHHH-HHHHHHHTTCCCEEEEESCHHHHHTCCSSCEEEEGGGHHHHHHTCSEEEECSSTTTTSCC-CSCCH
T ss_pred eEEEECcHHHHHH-HHHHHHHcCCCEEEEEeCCHHHHHHHHHHcccCCHHHHHhhhcCCCEEEECCCCCCCCCC-CCCCH
Confidence 7999999999995 43332 234444432 2323345566778899999999963211000 011 1
Q ss_pred cccCCCCEEEEecCCCcHHHHHhhCCCCCceEEEecCcHHhhhCCcE
Q psy6714 198 PVFNESNLLISVAGGVPIKNMEQALPKNSRIIRAMPNTPALVRQGAS 244 (303)
Q Consensus 198 ~~L~~g~IVVSiaaGV~ie~L~~~l~~~~~VVr~mPn~p~~v~~G~t 244 (303)
..++++.+|++++.+ ...-++.....+++ ++||+.++.++++..
T Consensus 188 ~~l~~~~~V~Divy~-~T~ll~~A~~~G~~--~~~~Gl~MLv~Qa~~ 231 (253)
T 3u62_A 188 DSLKNLSLVYDVIYF-DTPLVVKARKLGVK--HIIKGNLMFYYQAME 231 (253)
T ss_dssp HHHTTCSEEEECSSS-CCHHHHHHHHHTCS--EEECTHHHHHHHHHH
T ss_pred HHhCcCCEEEEeeCC-CcHHHHHHHHCCCc--EEECCHHHHHHHHHH
Confidence 235578899999888 66666655432222 489999999998764
No 149
>2glx_A 1,5-anhydro-D-fructose reductase; NADP(H) dependent reductase, rossmann-fold, sugar metabolism, 1,5-anhydro-D-mannitol, oxidoreductase; HET: NDP; 2.20A {Ensifer adhaerens}
Probab=97.59 E-value=0.00039 Score=64.12 Aligned_cols=86 Identities=5% Similarity=0.058 Sum_probs=53.9
Q ss_pred CcEEEEcCChhhHHHHHHHHh-----------hcHHH----HhhCCCe-EecChHHhhc--CCCEEEEeeCCccHHHHHH
Q psy6714 133 SDKQIAGTTERGPGALIASLN-----------IVSKA----TGTMGAK-ITFDNKEVTL--NSEVIILAVKPHIVPVALN 194 (303)
Q Consensus 133 mkIgIIGlG~MG~~~La~al~-----------r~~e~----l~e~Gv~-v~~d~~eav~--~ADIVILAVpP~~v~~VL~ 194 (303)
|||||||+|.||...++..+. +..++ ..++|+. ...+..++++ ++|+|++|+|+....+++.
T Consensus 1 ~~vgiiG~G~~g~~~~~~~l~~~~~~~vav~d~~~~~~~~~~~~~g~~~~~~~~~~~l~~~~~D~V~i~tp~~~h~~~~~ 80 (332)
T 2glx_A 1 NRWGLIGASTIAREWVIGAIRATGGEVVSMMSTSAERGAAYATENGIGKSVTSVEELVGDPDVDAVYVSTTNELHREQTL 80 (332)
T ss_dssp CEEEEESCCHHHHHTHHHHHHHTTCEEEEEECSCHHHHHHHHHHTTCSCCBSCHHHHHTCTTCCEEEECSCGGGHHHHHH
T ss_pred CeEEEEcccHHHHHhhhHHhhcCCCeEEEEECCCHHHHHHHHHHcCCCcccCCHHHHhcCCCCCEEEEeCChhHhHHHHH
Confidence 689999999999843243321 11222 2356774 6678888886 5999999999888777776
Q ss_pred hhccccCCCCEEEEec-CCCcHHHHHhh
Q psy6714 195 DIKPVFNESNLLISVA-GGVPIKNMEQA 221 (303)
Q Consensus 195 eI~~~L~~g~IVVSia-aGV~ie~L~~~ 221 (303)
... ..|+.|+.-. -+.+.+..+++
T Consensus 81 ~al---~~Gk~v~~ekP~~~~~~~~~~l 105 (332)
T 2glx_A 81 AAI---RAGKHVLCEKPLAMTLEDAREM 105 (332)
T ss_dssp HHH---HTTCEEEECSSSCSSHHHHHHH
T ss_pred HHH---HCCCeEEEeCCCcCCHHHHHHH
Confidence 543 3566555321 23455544443
No 150
>3oet_A Erythronate-4-phosphate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 2.36A {Salmonella enterica subsp}
Probab=97.58 E-value=4e-05 Score=74.17 Aligned_cols=92 Identities=14% Similarity=0.076 Sum_probs=58.0
Q ss_pred ccCCCcEEEEcCChhhHHHHHHHHhh----------cHHHHhhCCCeEecChHHhhcCCCEEEEeeCCc-c----HHHHH
Q psy6714 129 RWNRSDKQIAGTTERGPGALIASLNI----------VSKATGTMGAKITFDNKEVTLNSEVIILAVKPH-I----VPVAL 193 (303)
Q Consensus 129 ~~~~mkIgIIGlG~MG~~~La~al~r----------~~e~l~e~Gv~v~~d~~eav~~ADIVILAVpP~-~----v~~VL 193 (303)
.+..++|||||+|.||. .++..++. ..+. ...+. ...+..+++++||+|++++|.. . ...++
T Consensus 116 ~l~gktvGIIGlG~IG~-~vA~~l~a~G~~V~~~d~~~~~-~~~~~-~~~sl~ell~~aDiV~l~~Plt~~g~~~T~~li 192 (381)
T 3oet_A 116 SLRDRTIGIVGVGNVGS-RLQTRLEALGIRTLLCDPPRAA-RGDEG-DFRTLDELVQEADVLTFHTPLYKDGPYKTLHLA 192 (381)
T ss_dssp CGGGCEEEEECCSHHHH-HHHHHHHHTTCEEEEECHHHHH-TTCCS-CBCCHHHHHHHCSEEEECCCCCCSSTTCCTTSB
T ss_pred ccCCCEEEEEeECHHHH-HHHHHHHHCCCEEEEECCChHH-hccCc-ccCCHHHHHhhCCEEEEcCcCCccccccchhhc
Confidence 35578999999999999 46654321 1111 11222 3467889999999999999833 2 23333
Q ss_pred -HhhccccCCCCEEEEecCC--CcHHHHHhhCC
Q psy6714 194 -NDIKPVFNESNLLISVAGG--VPIKNMEQALP 223 (303)
Q Consensus 194 -~eI~~~L~~g~IVVSiaaG--V~ie~L~~~l~ 223 (303)
.+....++++.++|.+.-| ++.+.|.+.+.
T Consensus 193 ~~~~l~~mk~gailIN~aRG~vvde~aL~~aL~ 225 (381)
T 3oet_A 193 DETLIRRLKPGAILINACRGPVVDNAALLARLN 225 (381)
T ss_dssp CHHHHHHSCTTEEEEECSCGGGBCHHHHHHHHH
T ss_pred CHHHHhcCCCCcEEEECCCCcccCHHHHHHHHH
Confidence 2333346688999987633 34566766664
No 151
>3qy9_A DHPR, dihydrodipicolinate reductase; rossmann fold, NADH, NADPH, oxidoreductase; 1.80A {Staphylococcus aureus}
Probab=97.57 E-value=6e-05 Score=68.56 Aligned_cols=96 Identities=11% Similarity=0.021 Sum_probs=60.8
Q ss_pred CCcEEEEcCChhhHHHHHHHHhhcHHHH---------hhCCCeEecChHHhhcCCCEEEEeeCCccHHHHHHhhccccCC
Q psy6714 132 RSDKQIAGTTERGPGALIASLNIVSKAT---------GTMGAKITFDNKEVTLNSEVIILAVKPHIVPVALNDIKPVFNE 202 (303)
Q Consensus 132 ~mkIgIIGlG~MG~~~La~al~r~~e~l---------~e~Gv~v~~d~~eav~~ADIVILAVpP~~v~~VL~eI~~~L~~ 202 (303)
||||+|+|+|.||. .++..+......+ ...|+.++.|..+++ ++|+||-++.|..+.+.+. +..
T Consensus 3 MmkI~ViGaGrMG~-~i~~~l~~~~~eLva~~d~~~~~~~gv~v~~dl~~l~-~~DVvIDft~p~a~~~~~~-----l~~ 75 (243)
T 3qy9_A 3 SMKILLIGYGAMNQ-RVARLAEEKGHEIVGVIENTPKATTPYQQYQHIADVK-GADVAIDFSNPNLLFPLLD-----EDF 75 (243)
T ss_dssp CCEEEEECCSHHHH-HHHHHHHHTTCEEEEEECSSCC--CCSCBCSCTTTCT-TCSEEEECSCHHHHHHHHT-----SCC
T ss_pred ceEEEEECcCHHHH-HHHHHHHhCCCEEEEEEecCccccCCCceeCCHHHHh-CCCEEEEeCChHHHHHHHH-----Hhc
Confidence 78999999999999 5766543322111 124666667777777 8999997888887777765 334
Q ss_pred CCEEEEecCCCcHHH---HHhhCCCCCceEEEecCcH
Q psy6714 203 SNLLISVAGGVPIKN---MEQALPKNSRIIRAMPNTP 236 (303)
Q Consensus 203 g~IVVSiaaGV~ie~---L~~~l~~~~~VVr~mPn~p 236 (303)
+.-+|....|.+.+. |++.... .++ -+-||..
T Consensus 76 g~~vVigTTG~s~e~~~~l~~aa~~-~~v-~~a~N~S 110 (243)
T 3qy9_A 76 HLPLVVATTGEKEKLLNKLDELSQN-MPV-FFSANMS 110 (243)
T ss_dssp CCCEEECCCSSHHHHHHHHHHHTTT-SEE-EECSSCC
T ss_pred CCceEeCCCCCCHHHHHHHHHHHhc-CCE-EEECCcc
Confidence 554555556887644 4444432 333 3335643
No 152
>1xdw_A NAD+-dependent (R)-2-hydroxyglutarate dehydrogenase; structural variant of the BAB rossmann fold, oxidoreductase; 1.98A {Acidaminococcus fermentans}
Probab=97.56 E-value=2.3e-05 Score=74.03 Aligned_cols=92 Identities=13% Similarity=0.092 Sum_probs=57.3
Q ss_pred cCCCcEEEEcCChhhHHHHHHHHhh----------cHHHHhhCCCeEecChHHhhcCCCEEEEeeCCc-cHHHHH-Hhhc
Q psy6714 130 WNRSDKQIAGTTERGPGALIASLNI----------VSKATGTMGAKITFDNKEVTLNSEVIILAVKPH-IVPVAL-NDIK 197 (303)
Q Consensus 130 ~~~mkIgIIGlG~MG~~~La~al~r----------~~e~l~e~Gv~v~~d~~eav~~ADIVILAVpP~-~v~~VL-~eI~ 197 (303)
+..++|||||+|.||. .++..++. ..+...+.++. ..+..+++++||+|++++|.. ....++ ++..
T Consensus 144 l~g~~vgIiG~G~IG~-~~A~~l~~~G~~V~~~d~~~~~~~~~~~~-~~~l~ell~~aDvV~~~~p~t~~t~~li~~~~l 221 (331)
T 1xdw_A 144 VRNCTVGVVGLGRIGR-VAAQIFHGMGATVIGEDVFEIKGIEDYCT-QVSLDEVLEKSDIITIHAPYIKENGAVVTRDFL 221 (331)
T ss_dssp GGGSEEEEECCSHHHH-HHHHHHHHTTCEEEEECSSCCCSCTTTCE-ECCHHHHHHHCSEEEECCCCCTTTCCSBCHHHH
T ss_pred CCCCEEEEECcCHHHH-HHHHHHHHCCCEEEEECCCccHHHHhccc-cCCHHHHHhhCCEEEEecCCchHHHHHhCHHHH
Confidence 4568999999999999 46554321 11110111233 346778899999999999843 333333 2333
Q ss_pred cccCCCCEEEEecCC--CcHHHHHhhCC
Q psy6714 198 PVFNESNLLISVAGG--VPIKNMEQALP 223 (303)
Q Consensus 198 ~~L~~g~IVVSiaaG--V~ie~L~~~l~ 223 (303)
..++++.++|.+.-| ++.+.|.+.+.
T Consensus 222 ~~mk~ga~lin~srg~~vd~~aL~~aL~ 249 (331)
T 1xdw_A 222 KKMKDGAILVNCARGQLVDTEAVIEAVE 249 (331)
T ss_dssp HTSCTTEEEEECSCGGGBCHHHHHHHHH
T ss_pred hhCCCCcEEEECCCcccccHHHHHHHHH
Confidence 446788888877643 44566766664
No 153
>3moi_A Probable dehydrogenase; structural genomics, PSI2, MCSG, protein structure initiativ midwest center for structural genomics; 2.50A {Bordetella bronchiseptica}
Probab=97.54 E-value=0.00036 Score=66.41 Aligned_cols=86 Identities=7% Similarity=0.008 Sum_probs=54.5
Q ss_pred CCcEEEEcCC-hhhHHHHHHHHh------------hcHHH----HhhCCCeEecChHHhhc--CCCEEEEeeCCccHHHH
Q psy6714 132 RSDKQIAGTT-ERGPGALIASLN------------IVSKA----TGTMGAKITFDNKEVTL--NSEVIILAVKPHIVPVA 192 (303)
Q Consensus 132 ~mkIgIIGlG-~MG~~~La~al~------------r~~e~----l~e~Gv~v~~d~~eav~--~ADIVILAVpP~~v~~V 192 (303)
+|||||||+| .||.. ++..+. ...++ ..++|+....|.+++++ +.|+|++|+|+..-.++
T Consensus 2 ~~rigiiG~G~~~~~~-~~~~l~~~~~~~l~av~d~~~~~~~~~a~~~g~~~~~~~~ell~~~~vD~V~i~tp~~~H~~~ 80 (387)
T 3moi_A 2 KIRFGICGLGFAGSVL-MAPAMRHHPDAQIVAACDPNEDVRERFGKEYGIPVFATLAEMMQHVQMDAVYIASPHQFHCEH 80 (387)
T ss_dssp CEEEEEECCSHHHHTT-HHHHHHHCTTEEEEEEECSCHHHHHHHHHHHTCCEESSHHHHHHHSCCSEEEECSCGGGHHHH
T ss_pred ceEEEEEeCCHHHHHH-HHHHHHhCCCeEEEEEEeCCHHHHHHHHHHcCCCeECCHHHHHcCCCCCEEEEcCCcHHHHHH
Confidence 5799999999 88873 333221 12222 23568888889999886 49999999998877666
Q ss_pred HHhhccccCCCCEEEEec-CCCcHHHHHhh
Q psy6714 193 LNDIKPVFNESNLLISVA-GGVPIKNMEQA 221 (303)
Q Consensus 193 L~eI~~~L~~g~IVVSia-aGV~ie~L~~~ 221 (303)
+..... .++-|+.-. -..+.+..+++
T Consensus 81 ~~~al~---aGk~Vl~EKP~a~~~~e~~~l 107 (387)
T 3moi_A 81 VVQASE---QGLHIIVEKPLTLSRDEADRM 107 (387)
T ss_dssp HHHHHH---TTCEEEECSCCCSCHHHHHHH
T ss_pred HHHHHH---CCCceeeeCCccCCHHHHHHH
Confidence 655432 455555321 13445544443
No 154
>2o4c_A Erythronate-4-phosphate dehydrogenase; erythronate-4-phsphate, NAD, tartrate, phosph oxidoreductase; HET: NAD TLA; 2.30A {Pseudomonas aeruginosa}
Probab=97.52 E-value=3.3e-05 Score=74.66 Aligned_cols=91 Identities=14% Similarity=0.157 Sum_probs=59.1
Q ss_pred cCCCcEEEEcCChhhHHHHHHHHhh----------cHHHHhhCCCeEecChHHhhcCCCEEEEeeCCcc-----HHHHH-
Q psy6714 130 WNRSDKQIAGTTERGPGALIASLNI----------VSKATGTMGAKITFDNKEVTLNSEVIILAVKPHI-----VPVAL- 193 (303)
Q Consensus 130 ~~~mkIgIIGlG~MG~~~La~al~r----------~~e~l~e~Gv~v~~d~~eav~~ADIVILAVpP~~-----v~~VL- 193 (303)
+..++|||||+|+||. .++..++. ..+. ...|.. ..+..+++++||+|++++|... ...++
T Consensus 114 l~g~tvGIIGlG~IG~-~vA~~l~~~G~~V~~~d~~~~~-~~~g~~-~~~l~ell~~aDvV~l~~Plt~~g~~~T~~li~ 190 (380)
T 2o4c_A 114 LAERTYGVVGAGQVGG-RLVEVLRGLGWKVLVCDPPRQA-REPDGE-FVSLERLLAEADVISLHTPLNRDGEHPTRHLLD 190 (380)
T ss_dssp GGGCEEEEECCSHHHH-HHHHHHHHTTCEEEEECHHHHH-HSTTSC-CCCHHHHHHHCSEEEECCCCCSSSSSCCTTSBC
T ss_pred cCCCEEEEEeCCHHHH-HHHHHHHHCCCEEEEEcCChhh-hccCcc-cCCHHHHHHhCCEEEEeccCccccccchhhhcC
Confidence 4568999999999999 46654321 1111 123443 3577888999999999998443 33333
Q ss_pred HhhccccCCCCEEEEecCC--CcHHHHHhhCC
Q psy6714 194 NDIKPVFNESNLLISVAGG--VPIKNMEQALP 223 (303)
Q Consensus 194 ~eI~~~L~~g~IVVSiaaG--V~ie~L~~~l~ 223 (303)
+++...++++.+||.+.-| ++.+.|.+.+.
T Consensus 191 ~~~l~~mk~gailIN~sRG~vvd~~aL~~aL~ 222 (380)
T 2o4c_A 191 EPRLAALRPGTWLVNASRGAVVDNQALRRLLE 222 (380)
T ss_dssp HHHHHTSCTTEEEEECSCGGGBCHHHHHHHHH
T ss_pred HHHHhhCCCCcEEEECCCCcccCHHHHHHHHH
Confidence 2344456788898877644 34556776664
No 155
>1dxy_A D-2-hydroxyisocaproate dehydrogenase; D-2-hydroxycarboxylate dehydrogenase, D-lactate dehydrogenas oxidoreductase; HET: NAD; 1.86A {Lactobacillus casei} SCOP: c.2.1.4 c.23.12.1
Probab=97.52 E-value=2.7e-05 Score=73.67 Aligned_cols=93 Identities=14% Similarity=0.090 Sum_probs=58.4
Q ss_pred cCCCcEEEEcCChhhHHHHHHHHhh----------cHHHHhhCCCeEecChHHhhcCCCEEEEeeCCcc-HHHHH-Hhhc
Q psy6714 130 WNRSDKQIAGTTERGPGALIASLNI----------VSKATGTMGAKITFDNKEVTLNSEVIILAVKPHI-VPVAL-NDIK 197 (303)
Q Consensus 130 ~~~mkIgIIGlG~MG~~~La~al~r----------~~e~l~e~Gv~v~~d~~eav~~ADIVILAVpP~~-v~~VL-~eI~ 197 (303)
+..++|||||+|.||. .++..++. ......+.++. ..+..+++++||+|++++|... ...++ .+..
T Consensus 143 l~g~~vgIiG~G~IG~-~~A~~l~~~G~~V~~~d~~~~~~~~~~~~-~~~l~ell~~aDvV~~~~P~~~~t~~li~~~~l 220 (333)
T 1dxy_A 143 LGQQTVGVMGTGHIGQ-VAIKLFKGFGAKVIAYDPYPMKGDHPDFD-YVSLEDLFKQSDVIDLHVPGIEQNTHIINEAAF 220 (333)
T ss_dssp GGGSEEEEECCSHHHH-HHHHHHHHTTCEEEEECSSCCSSCCTTCE-ECCHHHHHHHCSEEEECCCCCGGGTTSBCHHHH
T ss_pred CCCCEEEEECcCHHHH-HHHHHHHHCCCEEEEECCCcchhhHhccc-cCCHHHHHhcCCEEEEcCCCchhHHHHhCHHHH
Confidence 4568999999999999 46554321 11110111233 3467888999999999998543 43333 2333
Q ss_pred cccCCCCEEEEecCC--CcHHHHHhhCCC
Q psy6714 198 PVFNESNLLISVAGG--VPIKNMEQALPK 224 (303)
Q Consensus 198 ~~L~~g~IVVSiaaG--V~ie~L~~~l~~ 224 (303)
..++++.++|.+.-| ++.+.|.+.+..
T Consensus 221 ~~mk~ga~lIn~srg~~vd~~aL~~aL~~ 249 (333)
T 1dxy_A 221 NLMKPGAIVINTARPNLIDTQAMLSNLKS 249 (333)
T ss_dssp HHSCTTEEEEECSCTTSBCHHHHHHHHHT
T ss_pred hhCCCCcEEEECCCCcccCHHHHHHHHHh
Confidence 456788888876644 455677777653
No 156
>3e82_A Putative oxidoreductase; NAD, GFO/IDH/MOCA family, PSI-2, NYSGXRC, 11136F, structural genomics, protein structure initiative; 2.04A {Klebsiella pneumoniae subsp}
Probab=97.50 E-value=0.00077 Score=63.64 Aligned_cols=86 Identities=5% Similarity=0.031 Sum_probs=55.7
Q ss_pred CCcEEEEcCChhhHHHHHHHHh------------hcHHHHh-hC-CCeEecChHHhhc--CCCEEEEeeCCccHHHHHHh
Q psy6714 132 RSDKQIAGTTERGPGALIASLN------------IVSKATG-TM-GAKITFDNKEVTL--NSEVIILAVKPHIVPVALND 195 (303)
Q Consensus 132 ~mkIgIIGlG~MG~~~La~al~------------r~~e~l~-e~-Gv~v~~d~~eav~--~ADIVILAVpP~~v~~VL~e 195 (303)
++||||||+|.||....+..+. +..+++. +. ++.+..|.+++++ +.|+|++|+|+..-.+++..
T Consensus 7 ~~rvgiiG~G~~g~~~~~~~l~~~~~~~l~av~d~~~~~~~~~~~~~~~~~~~~~ll~~~~~D~V~i~tp~~~H~~~~~~ 86 (364)
T 3e82_A 7 TINIALIGYGFVGKTFHAPLIRSVPGLNLAFVASRDEEKVKRDLPDVTVIASPEAAVQHPDVDLVVIASPNATHAPLARL 86 (364)
T ss_dssp CEEEEEECCSHHHHHTHHHHHHTSTTEEEEEEECSCHHHHHHHCTTSEEESCHHHHHTCTTCSEEEECSCGGGHHHHHHH
T ss_pred cceEEEECCCHHHHHHHHHHHhhCCCeEEEEEEcCCHHHHHhhCCCCcEECCHHHHhcCCCCCEEEEeCChHHHHHHHHH
Confidence 5799999999999842333322 2223332 33 6778889999887 78999999998776666654
Q ss_pred hccccCCCCEEEEecC--CCcHHHHHhh
Q psy6714 196 IKPVFNESNLLISVAG--GVPIKNMEQA 221 (303)
Q Consensus 196 I~~~L~~g~IVVSiaa--GV~ie~L~~~ 221 (303)
.. ..|+-|+. -. +.+.+..+++
T Consensus 87 al---~aGk~Vl~-EKPla~~~~e~~~l 110 (364)
T 3e82_A 87 AL---NAGKHVVV-DKPFTLDMQEAREL 110 (364)
T ss_dssp HH---HTTCEEEE-CSCSCSSHHHHHHH
T ss_pred HH---HCCCcEEE-eCCCcCCHHHHHHH
Confidence 43 35565553 33 3455555443
No 157
>1y81_A Conserved hypothetical protein; hyperthermophIle, structural genomics, PSI, protein structure initiative; HET: COA; 1.70A {Pyrococcus furiosus} SCOP: c.2.1.8
Probab=97.49 E-value=5.6e-05 Score=62.74 Aligned_cols=103 Identities=14% Similarity=0.142 Sum_probs=64.5
Q ss_pred CCcEEEEcC----ChhhHHHHHHHHhhc--------HHHHhhCCCeEecChHHhhcCCCEEEEeeCCccHHHHHHhhccc
Q psy6714 132 RSDKQIAGT----TERGPGALIASLNIV--------SKATGTMGAKITFDNKEVTLNSEVIILAVKPHIVPVALNDIKPV 199 (303)
Q Consensus 132 ~mkIgIIGl----G~MG~~~La~al~r~--------~e~l~e~Gv~v~~d~~eav~~ADIVILAVpP~~v~~VL~eI~~~ 199 (303)
..+|+|||+ |.||.. ++..+.+. ...-.-.|+.+..+..|+.+..|+++++||+..+.++++++..
T Consensus 14 p~~IavIGaS~~~g~~G~~-~~~~L~~~G~~V~~vnp~~~~i~G~~~~~s~~el~~~vDlvii~vp~~~v~~v~~~~~~- 91 (138)
T 1y81_A 14 FRKIALVGASKNPAKYGNI-ILKDLLSKGFEVLPVNPNYDEIEGLKCYRSVRELPKDVDVIVFVVPPKVGLQVAKEAVE- 91 (138)
T ss_dssp CCEEEEETCCSCTTSHHHH-HHHHHHHTTCEEEEECTTCSEETTEECBSSGGGSCTTCCEEEECSCHHHHHHHHHHHHH-
T ss_pred CCeEEEEeecCCCCCHHHH-HHHHHHHCCCEEEEeCCCCCeECCeeecCCHHHhCCCCCEEEEEeCHHHHHHHHHHHHH-
Confidence 457999999 999995 44433211 1111124777777888888899999999999999999988765
Q ss_pred cCCCCEEEEecCCCcHHHHHhhCCCCCceEEEecCcHHhh
Q psy6714 200 FNESNLLISVAGGVPIKNMEQALPKNSRIIRAMPNTPALV 239 (303)
Q Consensus 200 L~~g~IVVSiaaGV~ie~L~~~l~~~~~VVr~mPn~p~~v 239 (303)
...+.+|+ ..++. .+++.+.+.. ..+--+.||....+
T Consensus 92 ~g~~~i~~-~~~~~-~~~l~~~a~~-~Gi~~igpnc~g~~ 128 (138)
T 1y81_A 92 AGFKKLWF-QPGAE-SEEIRRFLEK-AGVEYSFGRCIMVE 128 (138)
T ss_dssp TTCCEEEE-CTTSC-CHHHHHHHHH-HTCEEECSCCHHHH
T ss_pred cCCCEEEE-cCccH-HHHHHHHHHH-CCCEEEcCCcceEE
Confidence 33444555 44444 3445444431 11222347765443
No 158
>3e18_A Oxidoreductase; dehydrogenase, NAD-binding, structural genom protein structure initiative, PSI, NEW YORK structural GENO research consortium; HET: NAD; 1.95A {Listeria innocua}
Probab=97.48 E-value=0.00032 Score=66.14 Aligned_cols=85 Identities=11% Similarity=0.085 Sum_probs=55.8
Q ss_pred CCcEEEEcCChhhHHHHHHHHhh------------cHH---HHhhCCCeEecChHHhhc--CCCEEEEeeCCccHHHHHH
Q psy6714 132 RSDKQIAGTTERGPGALIASLNI------------VSK---ATGTMGAKITFDNKEVTL--NSEVIILAVKPHIVPVALN 194 (303)
Q Consensus 132 ~mkIgIIGlG~MG~~~La~al~r------------~~e---~l~e~Gv~v~~d~~eav~--~ADIVILAVpP~~v~~VL~ 194 (303)
++||||||+|.||. ..+..+.. ..+ .+.+.|+....|.+++++ +.|+|++|+|+..-.+++.
T Consensus 5 ~~~vgiiG~G~~g~-~~~~~l~~~~~~~l~av~d~~~~~~~~a~~~g~~~~~~~~~ll~~~~~D~V~i~tp~~~h~~~~~ 83 (359)
T 3e18_A 5 KYQLVIVGYGGMGS-YHVTLASAADNLEVHGVFDILAEKREAAAQKGLKIYESYEAVLADEKVDAVLIATPNDSHKELAI 83 (359)
T ss_dssp CEEEEEECCSHHHH-HHHHHHHTSTTEEEEEEECSSHHHHHHHHTTTCCBCSCHHHHHHCTTCCEEEECSCGGGHHHHHH
T ss_pred cCcEEEECcCHHHH-HHHHHHHhCCCcEEEEEEcCCHHHHHHHHhcCCceeCCHHHHhcCCCCCEEEEcCCcHHHHHHHH
Confidence 46899999999998 44444321 122 234678887888899887 7899999999887777765
Q ss_pred hhccccCCCCEEEEec-CCCcHHHHHh
Q psy6714 195 DIKPVFNESNLLISVA-GGVPIKNMEQ 220 (303)
Q Consensus 195 eI~~~L~~g~IVVSia-aGV~ie~L~~ 220 (303)
... ..|+-|+.-. -+.+.+..++
T Consensus 84 ~al---~aGkhVl~EKP~a~~~~ea~~ 107 (359)
T 3e18_A 84 SAL---EAGKHVVCEKPVTMTSEDLLA 107 (359)
T ss_dssp HHH---HTTCEEEEESSCCSSHHHHHH
T ss_pred HHH---HCCCCEEeeCCCcCCHHHHHH
Confidence 543 2455555321 1344554444
No 159
>3f4l_A Putative oxidoreductase YHHX; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; 2.00A {Escherichia coli k-12}
Probab=97.45 E-value=0.00042 Score=64.73 Aligned_cols=87 Identities=9% Similarity=0.017 Sum_probs=54.7
Q ss_pred CCCcEEEEcCChhhHHHHHH-HHh------------hcHH---HHhh-CCCeEecChHHhhcC--CCEEEEeeCCccHHH
Q psy6714 131 NRSDKQIAGTTERGPGALIA-SLN------------IVSK---ATGT-MGAKITFDNKEVTLN--SEVIILAVKPHIVPV 191 (303)
Q Consensus 131 ~~mkIgIIGlG~MG~~~La~-al~------------r~~e---~l~e-~Gv~v~~d~~eav~~--ADIVILAVpP~~v~~ 191 (303)
+++||||||+|.||..+.+. .+. +..+ .+.+ .|+.+..|.++++++ .|+|++|+|+..-.+
T Consensus 1 m~~rvgiiG~G~~g~~~~~~~~~~~~~~~~l~av~d~~~~~~~~~~~~~~~~~~~~~~~ll~~~~~D~V~i~tp~~~h~~ 80 (345)
T 3f4l_A 1 MVINCAFIGFGKSTTRYHLPYVLNRKDSWHVAHIFRRHAKPEEQAPIYSHIHFTSDLDEVLNDPDVKLVVVCTHADSHFE 80 (345)
T ss_dssp -CEEEEEECCSHHHHHHTHHHHTTCTTTEEEEEEECSSCCGGGGSGGGTTCEEESCTHHHHTCTTEEEEEECSCGGGHHH
T ss_pred CceEEEEEecCHHHHHHHHHHHHhcCCCeEEEEEEcCCHhHHHHHHhcCCCceECCHHHHhcCCCCCEEEEcCChHHHHH
Confidence 36799999999999843333 211 1111 1222 367788899998875 899999999887766
Q ss_pred HHHhhccccCCCCEEEEecC--CCcHHHHHhh
Q psy6714 192 ALNDIKPVFNESNLLISVAG--GVPIKNMEQA 221 (303)
Q Consensus 192 VL~eI~~~L~~g~IVVSiaa--GV~ie~L~~~ 221 (303)
++.... ..|+-|+. -. +.+.+..+++
T Consensus 81 ~~~~al---~aGk~Vl~-EKP~a~~~~e~~~l 108 (345)
T 3f4l_A 81 YAKRAL---EAGKNVLV-EKPFTPTLAQAKEL 108 (345)
T ss_dssp HHHHHH---HTTCEEEE-CSSSCSSHHHHHHH
T ss_pred HHHHHH---HcCCcEEE-eCCCCCCHHHHHHH
Confidence 665543 35666653 24 3455554443
No 160
>1lss_A TRK system potassium uptake protein TRKA homolog; KTN domain, NAD, RCK domain, potassium transport, potassium channel, KTRA; HET: NAD; 2.30A {Methanocaldococcus jannaschii} SCOP: c.2.1.9
Probab=97.45 E-value=0.00056 Score=54.20 Aligned_cols=82 Identities=16% Similarity=0.112 Sum_probs=49.5
Q ss_pred CCcEEEEcCChhhHHHHHHHHh----------hcHH---HHh-hCCCeE-ecC---hH----HhhcCCCEEEEeeCCccH
Q psy6714 132 RSDKQIAGTTERGPGALIASLN----------IVSK---ATG-TMGAKI-TFD---NK----EVTLNSEVIILAVKPHIV 189 (303)
Q Consensus 132 ~mkIgIIGlG~MG~~~La~al~----------r~~e---~l~-e~Gv~v-~~d---~~----eav~~ADIVILAVpP~~v 189 (303)
.|+|.|+|+|.||. .++..+. +..+ .+. ..|+.. ..+ .. ..++++|+||+|++....
T Consensus 4 ~m~i~IiG~G~iG~-~~a~~L~~~g~~v~~~d~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~~~~d~vi~~~~~~~~ 82 (140)
T 1lss_A 4 GMYIIIAGIGRVGY-TLAKSLSEKGHDIVLIDIDKDICKKASAEIDALVINGDCTKIKTLEDAGIEDADMYIAVTGKEEV 82 (140)
T ss_dssp -CEEEEECCSHHHH-HHHHHHHHTTCEEEEEESCHHHHHHHHHHCSSEEEESCTTSHHHHHHTTTTTCSEEEECCSCHHH
T ss_pred CCEEEEECCCHHHH-HHHHHHHhCCCeEEEEECCHHHHHHHHHhcCcEEEEcCCCCHHHHHHcCcccCCEEEEeeCCchH
Confidence 58999999999999 4665432 1222 233 347643 222 21 125689999999998766
Q ss_pred HHHHHhhccccCCCCEEEEecCCCcH
Q psy6714 190 PVALNDIKPVFNESNLLISVAGGVPI 215 (303)
Q Consensus 190 ~~VL~eI~~~L~~g~IVVSiaaGV~i 215 (303)
...+..+...++.+++|+. +.+...
T Consensus 83 ~~~~~~~~~~~~~~~ii~~-~~~~~~ 107 (140)
T 1lss_A 83 NLMSSLLAKSYGINKTIAR-ISEIEY 107 (140)
T ss_dssp HHHHHHHHHHTTCCCEEEE-CSSTTH
T ss_pred HHHHHHHHHHcCCCEEEEE-ecCHhH
Confidence 6555555555656666654 444444
No 161
>2duw_A Putative COA-binding protein; ligand binding protein; NMR {Klebsiella pneumoniae}
Probab=97.44 E-value=9.4e-05 Score=61.74 Aligned_cols=103 Identities=10% Similarity=0.054 Sum_probs=65.9
Q ss_pred CCcEEEEcC----ChhhHHHHHHHHhh--------cHHH--HhhCCCeEecChHHhhcCCCEEEEeeCCccHHHHHHhhc
Q psy6714 132 RSDKQIAGT----TERGPGALIASLNI--------VSKA--TGTMGAKITFDNKEVTLNSEVIILAVKPHIVPVALNDIK 197 (303)
Q Consensus 132 ~mkIgIIGl----G~MG~~~La~al~r--------~~e~--l~e~Gv~v~~d~~eav~~ADIVILAVpP~~v~~VL~eI~ 197 (303)
..+|+|||+ |.||.. ++..+.. +... -.-.|+.+..+..|+.+..|++++|||+..+.++++++.
T Consensus 13 p~~IavIGas~~~g~~G~~-~~~~L~~~G~~v~~vnp~~~g~~i~G~~~~~sl~el~~~~Dlvii~vp~~~v~~v~~~~~ 91 (145)
T 2duw_A 13 TRTIALVGASDKPDRPSYR-VMKYLLDQGYHVIPVSPKVAGKTLLGQQGYATLADVPEKVDMVDVFRNSEAAWGVAQEAI 91 (145)
T ss_dssp CCCEEEESCCSCTTSHHHH-HHHHHHHHTCCEEEECSSSTTSEETTEECCSSTTTCSSCCSEEECCSCSTHHHHHHHHHH
T ss_pred CCEEEEECcCCCCCChHHH-HHHHHHHCCCEEEEeCCcccccccCCeeccCCHHHcCCCCCEEEEEeCHHHHHHHHHHHH
Confidence 457999999 899994 4433321 1111 112477777788888888999999999999999998876
Q ss_pred cccCCCCEEEEecCCCcHHHHHhhCCCCCceEEE-ecCcHHhhh
Q psy6714 198 PVFNESNLLISVAGGVPIKNMEQALPKNSRIIRA-MPNTPALVR 240 (303)
Q Consensus 198 ~~L~~g~IVVSiaaGV~ie~L~~~l~~~~~VVr~-mPn~p~~v~ 240 (303)
. ...+.+|+. .+.. .+.+.+.+.. ..+++ .||....+.
T Consensus 92 ~-~g~~~i~i~-~~~~-~~~l~~~a~~--~Gi~~igpnc~g~~~ 130 (145)
T 2duw_A 92 A-IGAKTLWLQ-LGVI-NEQAAVLARE--AGLSVVMDRCPAIEL 130 (145)
T ss_dssp H-HTCCEEECC-TTCC-CHHHHHHHHT--TTCEEECSCCHHHHS
T ss_pred H-cCCCEEEEc-CChH-HHHHHHHHHH--cCCEEEcCCeeeEEc
Confidence 5 334445553 3333 4556555532 22344 488765443
No 162
>2ewd_A Lactate dehydrogenase,; protein-substrate_cofactor analog complex, oxidoreductase; HET: A3D; 2.00A {Cryptosporidium parvum} PDB: 2frm_A 2fn7_A* 2fnz_A* 2fm3_A
Probab=97.44 E-value=8.7e-05 Score=69.06 Aligned_cols=88 Identities=14% Similarity=0.196 Sum_probs=55.8
Q ss_pred CCcEEEEcCChhhHHHHHHHH-h----------hcHHHHh-------------hCC--CeEecChHHhhcCCCEEEEeeC
Q psy6714 132 RSDKQIAGTTERGPGALIASL-N----------IVSKATG-------------TMG--AKITFDNKEVTLNSEVIILAVK 185 (303)
Q Consensus 132 ~mkIgIIGlG~MG~~~La~al-~----------r~~e~l~-------------e~G--v~v~~d~~eav~~ADIVILAVp 185 (303)
+|||+|||+|.||.+ ++..+ . ...+++. ... +..+.+. +++++||+||+|+.
T Consensus 4 ~~kI~VIGaG~~G~~-ia~~la~~g~~~V~l~D~~~~~~~~~~~~l~~~~~~~~~~~~i~~t~d~-~a~~~aDiVi~avg 81 (317)
T 2ewd_A 4 RRKIAVIGSGQIGGN-IAYIVGKDNLADVVLFDIAEGIPQGKALDITHSMVMFGSTSKVIGTDDY-ADISGSDVVIITAS 81 (317)
T ss_dssp CCEEEEECCSHHHHH-HHHHHHHHTCCEEEEECSSSSHHHHHHHHHHHHHHHHTCCCCEEEESCG-GGGTTCSEEEECCC
T ss_pred CCEEEEECCCHHHHH-HHHHHHhCCCceEEEEeCCchHHHHHHHHHHhhhhhcCCCcEEEECCCH-HHhCCCCEEEEeCC
Confidence 579999999999995 44331 1 1111110 012 3334555 78899999999993
Q ss_pred ----------------CccHHHHHHhhccccCCCCEEEEecCCCcH--HHHHhhC
Q psy6714 186 ----------------PHIVPVALNDIKPVFNESNLLISVAGGVPI--KNMEQAL 222 (303)
Q Consensus 186 ----------------P~~v~~VL~eI~~~L~~g~IVVSiaaGV~i--e~L~~~l 222 (303)
...+.++++++.++. ++.+||...+++.+ ..+.+.+
T Consensus 82 ~p~~~g~~r~d~~~~~~~i~~~i~~~i~~~~-~~~iii~~sNp~~~~~~~~~~~~ 135 (317)
T 2ewd_A 82 IPGRPKDDRSELLFGNARILDSVAEGVKKYC-PNAFVICITNPLDVMVSHFQKVS 135 (317)
T ss_dssp CSSCCSSCGGGGHHHHHHHHHHHHHHHHHHC-TTSEEEECCSSHHHHHHHHHHHH
T ss_pred CCCCCCCcHHHHHHhhHHHHHHHHHHHHHHC-CCcEEEEeCChHHHHHHHHHHhh
Confidence 123567778887765 57888878777765 3444543
No 163
>1ydw_A AX110P-like protein; structural genomics, protein structure initiative, center for eukaryotic structural genomics, CESG, AT4G09670; 2.49A {Arabidopsis thaliana} SCOP: c.2.1.3 d.81.1.5 PDB: 2q4e_A
Probab=97.43 E-value=0.00061 Score=63.93 Aligned_cols=72 Identities=4% Similarity=0.048 Sum_probs=49.9
Q ss_pred CCcEEEEcCChhhHHHHHHHHhh------------cHHH----HhhCC----CeEecChHHhhc--CCCEEEEeeCCccH
Q psy6714 132 RSDKQIAGTTERGPGALIASLNI------------VSKA----TGTMG----AKITFDNKEVTL--NSEVIILAVKPHIV 189 (303)
Q Consensus 132 ~mkIgIIGlG~MG~~~La~al~r------------~~e~----l~e~G----v~v~~d~~eav~--~ADIVILAVpP~~v 189 (303)
+|||||||+|.||. .++..+.. ..++ ..++| ..+..+.+++++ ++|+|++|+|+..-
T Consensus 6 ~~~vgiiG~G~ig~-~~~~~l~~~~~~~lv~v~d~~~~~~~~~a~~~~~~~~~~~~~~~~~ll~~~~~D~V~i~tp~~~h 84 (362)
T 1ydw_A 6 QIRIGVMGCADIAR-KVSRAIHLAPNATISGVASRSLEKAKAFATANNYPESTKIHGSYESLLEDPEIDALYVPLPTSLH 84 (362)
T ss_dssp CEEEEEESCCTTHH-HHHHHHHHCTTEEEEEEECSSHHHHHHHHHHTTCCTTCEEESSHHHHHHCTTCCEEEECCCGGGH
T ss_pred ceEEEEECchHHHH-HHHHHHhhCCCcEEEEEEcCCHHHHHHHHHHhCCCCCCeeeCCHHHHhcCCCCCEEEEcCChHHH
Confidence 57999999999998 45444321 1222 23456 366788888886 59999999998887
Q ss_pred HHHHHhhccccCCCCEEE
Q psy6714 190 PVALNDIKPVFNESNLLI 207 (303)
Q Consensus 190 ~~VL~eI~~~L~~g~IVV 207 (303)
.+++... +..|+-|+
T Consensus 85 ~~~~~~a---l~aGk~V~ 99 (362)
T 1ydw_A 85 VEWAIKA---AEKGKHIL 99 (362)
T ss_dssp HHHHHHH---HTTTCEEE
T ss_pred HHHHHHH---HHCCCeEE
Confidence 7777654 34566555
No 164
>3ec7_A Putative dehydrogenase; alpha-beta, structural genomics, PSI-2, protein structure in midwest center for structural genomics, MCSG; HET: MSE NAD EPE; 2.15A {Salmonella typhimurium}
Probab=97.42 E-value=0.0005 Score=64.77 Aligned_cols=85 Identities=14% Similarity=0.105 Sum_probs=54.7
Q ss_pred CCcEEEEcCChhhHHHHHHHHh-h------------cHHH----HhhCC--CeEecChHHhhc--CCCEEEEeeCCccHH
Q psy6714 132 RSDKQIAGTTERGPGALIASLN-I------------VSKA----TGTMG--AKITFDNKEVTL--NSEVIILAVKPHIVP 190 (303)
Q Consensus 132 ~mkIgIIGlG~MG~~~La~al~-r------------~~e~----l~e~G--v~v~~d~~eav~--~ADIVILAVpP~~v~ 190 (303)
++||||||+|.||.. .+..+. . ..++ .+++| .....+..++++ +.|+|++|+|+..-.
T Consensus 23 ~~rvgiIG~G~~g~~-~~~~l~~~~~~~~lvav~d~~~~~~~~~a~~~g~~~~~~~~~~~ll~~~~~D~V~i~tp~~~h~ 101 (357)
T 3ec7_A 23 TLKAGIVGIGMIGSD-HLRRLANTVSGVEVVAVCDIVAGRAQAALDKYAIEAKDYNDYHDLINDKDVEVVIITASNEAHA 101 (357)
T ss_dssp CEEEEEECCSHHHHH-HHHHHHHTCTTEEEEEEECSSTTHHHHHHHHHTCCCEEESSHHHHHHCTTCCEEEECSCGGGHH
T ss_pred eeeEEEECCcHHHHH-HHHHHHhhCCCcEEEEEEeCCHHHHHHHHHHhCCCCeeeCCHHHHhcCCCCCEEEEcCCcHHHH
Confidence 468999999999984 443332 1 1112 23557 677889999887 589999999988877
Q ss_pred HHHHhhccccCCCCEEEEec-CCCcHHHHHh
Q psy6714 191 VALNDIKPVFNESNLLISVA-GGVPIKNMEQ 220 (303)
Q Consensus 191 ~VL~eI~~~L~~g~IVVSia-aGV~ie~L~~ 220 (303)
+++..... .|+-|+.-. -..+.+..++
T Consensus 102 ~~~~~al~---aGk~Vl~EKPla~~~~e~~~ 129 (357)
T 3ec7_A 102 DVAVAALN---ANKYVFCEKPLAVTAADCQR 129 (357)
T ss_dssp HHHHHHHH---TTCEEEEESSSCSSHHHHHH
T ss_pred HHHHHHHH---CCCCEEeecCccCCHHHHHH
Confidence 77765433 455455321 1345554444
No 165
>3i23_A Oxidoreductase, GFO/IDH/MOCA family; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium; 2.30A {Enterococcus faecalis} PDB: 3fd8_A* 3hnp_A
Probab=97.41 E-value=0.001 Score=62.19 Aligned_cols=88 Identities=13% Similarity=0.074 Sum_probs=54.9
Q ss_pred CCCcEEEEcCChhhHHHHHHHHhh------------c-HHHH-hh---CCCeEecChHHhhcC--CCEEEEeeCCccHHH
Q psy6714 131 NRSDKQIAGTTERGPGALIASLNI------------V-SKAT-GT---MGAKITFDNKEVTLN--SEVIILAVKPHIVPV 191 (303)
Q Consensus 131 ~~mkIgIIGlG~MG~~~La~al~r------------~-~e~l-~e---~Gv~v~~d~~eav~~--ADIVILAVpP~~v~~ 191 (303)
|++||||||+|.||....+..+.. . .+.+ .+ .|+.+..|.++++++ .|+|++|+|+..-.+
T Consensus 1 M~~rvgiiG~G~~g~~~~~~~l~~~~~~~l~av~d~~~~~~~a~~~~~~~~~~~~~~~~ll~~~~~D~V~i~tp~~~h~~ 80 (349)
T 3i23_A 1 MTVKMGFIGFGKSANRYHLPYVMIRETLEVKTIFDLHVNEKAAAPFKEKGVNFTADLNELLTDPEIELITICTPAHTHYD 80 (349)
T ss_dssp CCEEEEEECCSHHHHHTTHHHHTTCTTEEEEEEECTTCCHHHHHHHHTTTCEEESCTHHHHSCTTCCEEEECSCGGGHHH
T ss_pred CeeEEEEEccCHHHHHHHHHHHhhCCCeEEEEEECCCHHHHHHHhhCCCCCeEECCHHHHhcCCCCCEEEEeCCcHHHHH
Confidence 467999999999997323322211 1 1222 22 477888899998875 899999999877666
Q ss_pred HHHhhccccCCCCEEEEecC-CCcHHHHHhh
Q psy6714 192 ALNDIKPVFNESNLLISVAG-GVPIKNMEQA 221 (303)
Q Consensus 192 VL~eI~~~L~~g~IVVSiaa-GV~ie~L~~~ 221 (303)
++.... ..|+-|+.-.- ..+.+..+++
T Consensus 81 ~~~~al---~aGk~Vl~EKP~a~~~~e~~~l 108 (349)
T 3i23_A 81 LAKQAI---LAGKSVIVEKPFCDTLEHAEEL 108 (349)
T ss_dssp HHHHHH---HTTCEEEECSCSCSSHHHHHHH
T ss_pred HHHHHH---HcCCEEEEECCCcCCHHHHHHH
Confidence 665543 24555553211 3445554443
No 166
>3gdo_A Uncharacterized oxidoreductase YVAA; structural genomics, putative oxidoreductase YVAA, oxidoredu PSI-2, protein structure initiative; 2.03A {Bacillus subtilis subsp} PDB: 3gfg_A
Probab=97.40 E-value=0.001 Score=62.55 Aligned_cols=87 Identities=11% Similarity=0.040 Sum_probs=56.0
Q ss_pred CCcEEEEcCChhhHHHHHHHHh------------hcHHHHh-hC-CCeEecChHHhhc--CCCEEEEeeCCccHHHHHHh
Q psy6714 132 RSDKQIAGTTERGPGALIASLN------------IVSKATG-TM-GAKITFDNKEVTL--NSEVIILAVKPHIVPVALND 195 (303)
Q Consensus 132 ~mkIgIIGlG~MG~~~La~al~------------r~~e~l~-e~-Gv~v~~d~~eav~--~ADIVILAVpP~~v~~VL~e 195 (303)
++||||||+|.||....+..+. +..+++. ++ ++.+..|.+++++ +.|+|++|+|+..-.+++..
T Consensus 5 ~~rvgiiG~G~~g~~~~~~~l~~~~~~~l~av~d~~~~~~~~~~~~~~~~~~~~~ll~~~~vD~V~i~tp~~~H~~~~~~ 84 (358)
T 3gdo_A 5 TIKVGILGYGLSGSVFHGPLLDVLDEYQISKIMTSRTEEVKRDFPDAEVVHELEEITNDPAIELVIVTTPSGLHYEHTMA 84 (358)
T ss_dssp CEEEEEECCSHHHHHTTHHHHTTCTTEEEEEEECSCHHHHHHHCTTSEEESSTHHHHTCTTCCEEEECSCTTTHHHHHHH
T ss_pred cceEEEEccCHHHHHHHHHHHhhCCCeEEEEEEcCCHHHHHhhCCCCceECCHHHHhcCCCCCEEEEcCCcHHHHHHHHH
Confidence 5799999999999842333322 2223332 34 6778889999887 68999999998877776655
Q ss_pred hccccCCCCEEEEecC-CCcHHHHHhh
Q psy6714 196 IKPVFNESNLLISVAG-GVPIKNMEQA 221 (303)
Q Consensus 196 I~~~L~~g~IVVSiaa-GV~ie~L~~~ 221 (303)
.. ..|+-|+.-.- +.+.+..+++
T Consensus 85 al---~aGkhVl~EKPla~~~~e~~~l 108 (358)
T 3gdo_A 85 CI---QAGKHVVMEKPMTATAEEGETL 108 (358)
T ss_dssp HH---HTTCEEEEESSCCSSHHHHHHH
T ss_pred HH---HcCCeEEEecCCcCCHHHHHHH
Confidence 43 35565553221 3455555443
No 167
>2v6b_A L-LDH, L-lactate dehydrogenase; oxidoreductase, radioresistance, NAD, cytoplasm, mesophilic, glycolysis; 2.50A {Deinococcus radiodurans}
Probab=97.39 E-value=0.00044 Score=64.20 Aligned_cols=99 Identities=15% Similarity=0.167 Sum_probs=59.4
Q ss_pred CcEEEEcCChhhHHHHHHHH------------hhcHHHH----hh--------CCCeEecChHHhhcCCCEEEEeeC-Cc
Q psy6714 133 SDKQIAGTTERGPGALIASL------------NIVSKAT----GT--------MGAKITFDNKEVTLNSEVIILAVK-PH 187 (303)
Q Consensus 133 mkIgIIGlG~MG~~~La~al------------~r~~e~l----~e--------~Gv~v~~d~~eav~~ADIVILAVp-P~ 187 (303)
|||+|||+|.||.+ ++..+ +...+++ .+ ....+..+..+++++||+||++++ |.
T Consensus 1 mkI~VIGaG~vG~~-la~~la~~g~~~eV~L~D~~~~~~~~~~~~l~~~~~~~~~~~i~~~~~~a~~~aDvVIi~~~~~~ 79 (304)
T 2v6b_A 1 MKVGVVGTGFVGST-AAFALVLRGSCSELVLVDRDEDRAQAEAEDIAHAAPVSHGTRVWHGGHSELADAQVVILTAGANQ 79 (304)
T ss_dssp CEEEEECCSHHHHH-HHHHHHHTTCCSEEEEECSSHHHHHHHHHHHTTSCCTTSCCEEEEECGGGGTTCSEEEECC----
T ss_pred CEEEEECCCHHHHH-HHHHHHhCCCCCEEEEEeCCHHHHHHHHHhhhhhhhhcCCeEEEECCHHHhCCCCEEEEcCCCCC
Confidence 79999999999994 54332 1111211 11 122333233567899999999995 32
Q ss_pred ---------------cHHHHHHhhccccCCCCEEEEecCCCcHH--HHHhhCCCCCceEEEecC
Q psy6714 188 ---------------IVPVALNDIKPVFNESNLLISVAGGVPIK--NMEQALPKNSRIIRAMPN 234 (303)
Q Consensus 188 ---------------~v~~VL~eI~~~L~~g~IVVSiaaGV~ie--~L~~~l~~~~~VVr~mPn 234 (303)
.+.++++++.++ .++.+||...+++... .+.+.++. .+++.+...
T Consensus 80 ~~g~~r~dl~~~n~~i~~~i~~~i~~~-~p~~~vi~~tNP~~~~~~~~~~~~~~-~rviG~gt~ 141 (304)
T 2v6b_A 80 KPGESRLDLLEKNADIFRELVPQITRA-APDAVLLVTSNPVDLLTDLATQLAPG-QPVIGSGTV 141 (304)
T ss_dssp --------CHHHHHHHHHHHHHHHHHH-CSSSEEEECSSSHHHHHHHHHHHSCS-SCEEECTTH
T ss_pred CCCCcHHHHHHhHHHHHHHHHHHHHHh-CCCeEEEEecCchHHHHHHHHHhCCh-hcEEeCCcC
Confidence 236777777776 4677777677777653 35555553 467666444
No 168
>3kux_A Putative oxidoreductase; oxidoreductase family, csgid, structural genomics, center FO structural genomics of infectious diseases; HET: MSE; 2.75A {Yersinia pestis}
Probab=97.37 E-value=0.001 Score=62.19 Aligned_cols=87 Identities=5% Similarity=-0.033 Sum_probs=54.7
Q ss_pred CCcEEEEcCChhhHHHHHHHHh------------hcHHHHh-hC-CCeEecChHHhhcC--CCEEEEeeCCccHHHHHHh
Q psy6714 132 RSDKQIAGTTERGPGALIASLN------------IVSKATG-TM-GAKITFDNKEVTLN--SEVIILAVKPHIVPVALND 195 (303)
Q Consensus 132 ~mkIgIIGlG~MG~~~La~al~------------r~~e~l~-e~-Gv~v~~d~~eav~~--ADIVILAVpP~~v~~VL~e 195 (303)
++||||||+|.||....+..+. +..+++. .. ++.+..|..+++++ .|+|++|+|+..-.+++..
T Consensus 7 ~~rvgiiG~G~~g~~~~~~~~~~~~~~~l~av~d~~~~~~~~~~~~~~~~~~~~~ll~~~~vD~V~i~tp~~~H~~~~~~ 86 (352)
T 3kux_A 7 KIKVGLLGYGYASKTFHAPLIMGTPGLELAGVSSSDASKVHADWPAIPVVSDPQMLFNDPSIDLIVIPTPNDTHFPLAQS 86 (352)
T ss_dssp CEEEEEECCSHHHHHTHHHHHHTSTTEEEEEEECSCHHHHHTTCSSCCEESCHHHHHHCSSCCEEEECSCTTTHHHHHHH
T ss_pred CceEEEECCCHHHHHHHHHHHhhCCCcEEEEEECCCHHHHHhhCCCCceECCHHHHhcCCCCCEEEEeCChHHHHHHHHH
Confidence 4789999999999842333322 2223333 22 56778899998875 8999999997776666654
Q ss_pred hccccCCCCEEEEecC-CCcHHHHHhh
Q psy6714 196 IKPVFNESNLLISVAG-GVPIKNMEQA 221 (303)
Q Consensus 196 I~~~L~~g~IVVSiaa-GV~ie~L~~~ 221 (303)
.. ..|+-|+.-.- +.+.+..+++
T Consensus 87 al---~aGkhV~~EKPla~~~~e~~~l 110 (352)
T 3kux_A 87 AL---AAGKHVVVDKPFTVTLSQANAL 110 (352)
T ss_dssp HH---HTTCEEEECSSCCSCHHHHHHH
T ss_pred HH---HCCCcEEEECCCcCCHHHHHHH
Confidence 43 35555553322 3555555443
No 169
>3fhl_A Putative oxidoreductase; NAD-binding domain, PSI-2, NYSGXRC, structur genomics, protein structure initiative; 1.93A {Bacteroides fragilis nctc 9343}
Probab=97.37 E-value=0.00081 Score=63.27 Aligned_cols=87 Identities=11% Similarity=-0.007 Sum_probs=55.1
Q ss_pred CCcEEEEcCChhhHHHHHHHHh------------hcHHHHh-hC-CCeEecChHHhhcC--CCEEEEeeCCccHHHHHHh
Q psy6714 132 RSDKQIAGTTERGPGALIASLN------------IVSKATG-TM-GAKITFDNKEVTLN--SEVIILAVKPHIVPVALND 195 (303)
Q Consensus 132 ~mkIgIIGlG~MG~~~La~al~------------r~~e~l~-e~-Gv~v~~d~~eav~~--ADIVILAVpP~~v~~VL~e 195 (303)
++||||||+|.||....+..+. +..+++. ++ ++.+..|.++++++ .|+|++|+|+..-.+++..
T Consensus 5 ~~rvgiiG~G~~g~~~~~~~l~~~~~~~l~av~d~~~~~~~~~~~~~~~~~~~~~ll~~~~vD~V~i~tp~~~H~~~~~~ 84 (362)
T 3fhl_A 5 IIKTGLAAFGMSGQVFHAPFISTNPHFELYKIVERSKELSKERYPQASIVRSFKELTEDPEIDLIVVNTPDNTHYEYAGM 84 (362)
T ss_dssp CEEEEESCCSHHHHHTTHHHHHHCTTEEEEEEECSSCCGGGTTCTTSEEESCSHHHHTCTTCCEEEECSCGGGHHHHHHH
T ss_pred ceEEEEECCCHHHHHHHHHHHhhCCCeEEEEEEcCCHHHHHHhCCCCceECCHHHHhcCCCCCEEEEeCChHHHHHHHHH
Confidence 5799999999999832232221 1222332 34 67788899998876 8999999998776666655
Q ss_pred hccccCCCCEEEEecC-CCcHHHHHhh
Q psy6714 196 IKPVFNESNLLISVAG-GVPIKNMEQA 221 (303)
Q Consensus 196 I~~~L~~g~IVVSiaa-GV~ie~L~~~ 221 (303)
.. ..|+-|+.-.- +.+.+..+++
T Consensus 85 al---~aGkhVl~EKP~a~~~~ea~~l 108 (362)
T 3fhl_A 85 AL---EAGKNVVVEKPFTSTTKQGEEL 108 (362)
T ss_dssp HH---HTTCEEEEESSCCSSHHHHHHH
T ss_pred HH---HCCCeEEEecCCCCCHHHHHHH
Confidence 43 24555553221 3455555544
No 170
>1tlt_A Putative oxidoreductase (virulence factor MVIM HO; structural genomics, NYSGXRC, PSI, protein structure initiative; 2.70A {Escherichia coli} SCOP: c.2.1.3 d.81.1.5
Probab=97.31 E-value=0.00063 Score=62.63 Aligned_cols=84 Identities=5% Similarity=-0.013 Sum_probs=51.4
Q ss_pred CCcEEEEcCChhhHHHHHHHHhh------------cHH---H-HhhCCCeEecChHHhhcCCCEEEEeeCCccHHHHHHh
Q psy6714 132 RSDKQIAGTTERGPGALIASLNI------------VSK---A-TGTMGAKITFDNKEVTLNSEVIILAVKPHIVPVALND 195 (303)
Q Consensus 132 ~mkIgIIGlG~MG~~~La~al~r------------~~e---~-l~e~Gv~v~~d~~eav~~ADIVILAVpP~~v~~VL~e 195 (303)
+|||||||+|.||...++..+.. ..+ . ..++|+....+.+++..++|+|++|+|+....+++..
T Consensus 5 ~~~vgiiG~G~~g~~~~~~~l~~~~~~~lvav~d~~~~~~~~~~~~~g~~~~~~~~~l~~~~D~V~i~tp~~~h~~~~~~ 84 (319)
T 1tlt_A 5 KLRIGVVGLGGIAQKAWLPVLAAASDWTLQGAWSPTRAKALPICESWRIPYADSLSSLAASCDAVFVHSSTASHFDVVST 84 (319)
T ss_dssp CEEEEEECCSTHHHHTHHHHHHSCSSEEEEEEECSSCTTHHHHHHHHTCCBCSSHHHHHTTCSEEEECSCTTHHHHHHHH
T ss_pred cceEEEECCCHHHHHHHHHHHHhCCCeEEEEEECCCHHHHHHHHHHcCCCccCcHHHhhcCCCEEEEeCCchhHHHHHHH
Confidence 57899999999998324433221 111 2 2345776556666665689999999998877777655
Q ss_pred hccccCCCCEEEEe-cCCCcHHHH
Q psy6714 196 IKPVFNESNLLISV-AGGVPIKNM 218 (303)
Q Consensus 196 I~~~L~~g~IVVSi-aaGV~ie~L 218 (303)
.. ..|+-|+.- --+.+.+..
T Consensus 85 al---~~G~~v~~eKP~~~~~~~~ 105 (319)
T 1tlt_A 85 LL---NAGVHVCVDKPLAENLRDA 105 (319)
T ss_dssp HH---HTTCEEEEESSSCSSHHHH
T ss_pred HH---HcCCeEEEeCCCCCCHHHH
Confidence 43 345544422 123445443
No 171
>2nqt_A N-acetyl-gamma-glutamyl-phosphate reductase; apoprotein, dimer, rossmann fold, structural genomics, PSI, protein structure initiative; 1.58A {Mycobacterium tuberculosis} PDB: 2i3a_A* 2i3g_A
Probab=97.26 E-value=0.00072 Score=64.55 Aligned_cols=146 Identities=12% Similarity=0.123 Sum_probs=82.5
Q ss_pred CCcEEEEc-CChhhHHHHHHHHhhcH-----H--------------HHhh----C----CCeEecChHHhhcCCCEEEEe
Q psy6714 132 RSDKQIAG-TTERGPGALIASLNIVS-----K--------------ATGT----M----GAKITFDNKEVTLNSEVIILA 183 (303)
Q Consensus 132 ~mkIgIIG-lG~MG~~~La~al~r~~-----e--------------~l~e----~----Gv~v~~d~~eav~~ADIVILA 183 (303)
||||+|+| +|.+|. .|...+.... . .+.. + .+.+..-..+.+.++|+||+|
T Consensus 9 m~kVaIvGATG~vG~-~llr~L~~~~~~~~~~~ei~~l~s~~~agk~~~~~~~~l~~~~~~~~~~~~~~~~~~~DvVf~a 87 (352)
T 2nqt_A 9 ATKVAVAGASGYAGG-EILRLLLGHPAYADGRLRIGALTAATSAGSTLGEHHPHLTPLAHRVVEPTEAAVLGGHDAVFLA 87 (352)
T ss_dssp CEEEEEETTTSHHHH-HHHHHHHTCHHHHTTSEEEEEEEESSCTTSBGGGTCTTCGGGTTCBCEECCHHHHTTCSEEEEC
T ss_pred CCEEEEECCCCHHHH-HHHHHHHcCCCCCCccEEEEEEECCCcCCCchhhhcccccccceeeeccCCHHHhcCCCEEEEC
Confidence 57999999 999999 4555433222 1 0110 0 111111113345689999999
Q ss_pred eCCccHHHHHHhhccccCCCCEEEEecCCCcH---HHHHhhCCCCCc--eEEEecCc--H-HhhhCCcEEEEeCCCCCHH
Q psy6714 184 VKPHIVPVALNDIKPVFNESNLLISVAGGVPI---KNMEQALPKNSR--IIRAMPNT--P-ALVRQGASVFVRGSSASDQ 255 (303)
Q Consensus 184 VpP~~v~~VL~eI~~~L~~g~IVVSiaaGV~i---e~L~~~l~~~~~--VVr~mPn~--p-~~v~~G~til~~g~~~~~e 255 (303)
++.....+++..+ . .|..||++.+.... +..+++.+.... ++..+|-. . ..+.+. .+ +..+++...
T Consensus 88 lg~~~s~~~~~~~-~---~G~~vIDlSa~~R~~~~~~~~~~y~~~h~~~~vyglPEv~~n~~~i~~~-~i-IanPgC~tt 161 (352)
T 2nqt_A 88 LPHGHSAVLAQQL-S---PETLIIDCGADFRLTDAAVWERFYGSSHAGSWPYGLPELPGARDQLRGT-RR-IAVPGCYPT 161 (352)
T ss_dssp CTTSCCHHHHHHS-C---TTSEEEECSSTTTCSCHHHHHHHHSSCCCCCCCBSCTTSTTHHHHHTTC-SE-EECCCHHHH
T ss_pred CCCcchHHHHHHH-h---CCCEEEEECCCccCCcchhhhhhccccCCCCeeEEecccccCHHHHhcC-CE-EEcCCHHHH
Confidence 9988888887766 3 56788887766532 456666653233 47777776 3 334432 33 334445544
Q ss_pred H-HHHHHHHHHhcCCcEEcCCCCchhhhhhccc
Q psy6714 256 D-AQTVINLFKSVGTCEEVPEYLLDGITGLSGS 287 (303)
Q Consensus 256 ~-~e~V~~Lfs~iG~~v~vdE~~~Da~tAlsGs 287 (303)
. .-.+..|++..|.... -.++...++||.
T Consensus 162 ~~~lal~PL~~~~~i~~~---i~v~t~~g~SGa 191 (352)
T 2nqt_A 162 AALLALFPALAADLIEPA---VTVVAVSGTSGA 191 (352)
T ss_dssp HHHHHHHHHHHTTCSCSE---EEEEEEECGGGG
T ss_pred HHHHHHHHHHHcCCCcce---EEEEEEeccccC
Confidence 4 3456666666554311 234445555554
No 172
>4had_A Probable oxidoreductase protein; structural genomics, protein structure initiative, nysgrc, PSI-biology; 2.00A {Rhizobium etli}
Probab=97.26 E-value=0.00057 Score=63.56 Aligned_cols=73 Identities=5% Similarity=-0.025 Sum_probs=48.3
Q ss_pred CCcEEEEcCChhhHHHHHHHH------------hhcHHH----HhhCCC-eEecChHHhhc--CCCEEEEeeCCccHHHH
Q psy6714 132 RSDKQIAGTTERGPGALIASL------------NIVSKA----TGTMGA-KITFDNKEVTL--NSEVIILAVKPHIVPVA 192 (303)
Q Consensus 132 ~mkIgIIGlG~MG~~~La~al------------~r~~e~----l~e~Gv-~v~~d~~eav~--~ADIVILAVpP~~v~~V 192 (303)
|+||||||+|.||...++..+ +++.++ .+++|+ .+..|.+++++ +.|+|++|+|+..=.++
T Consensus 23 mirigiIG~G~ig~~~~~~~~~~~~~~~lvav~d~~~~~a~~~a~~~g~~~~y~d~~ell~~~~iDaV~I~tP~~~H~~~ 102 (350)
T 4had_A 23 MLRFGIISTAKIGRDNVVPAIQDAENCVVTAIASRDLTRAREMADRFSVPHAFGSYEEMLASDVIDAVYIPLPTSQHIEW 102 (350)
T ss_dssp CEEEEEESCCHHHHHTHHHHHHHCSSEEEEEEECSSHHHHHHHHHHHTCSEEESSHHHHHHCSSCSEEEECSCGGGHHHH
T ss_pred ccEEEEEcChHHHHHHHHHHHHhCCCeEEEEEECCCHHHHHHHHHHcCCCeeeCCHHHHhcCCCCCEEEEeCCCchhHHH
Confidence 689999999999972233222 122222 346787 57788999885 47999999997776666
Q ss_pred HHhhccccCCCCEEE
Q psy6714 193 LNDIKPVFNESNLLI 207 (303)
Q Consensus 193 L~eI~~~L~~g~IVV 207 (303)
+..... .|+-|+
T Consensus 103 ~~~al~---aGkhVl 114 (350)
T 4had_A 103 SIKAAD---AGKHVV 114 (350)
T ss_dssp HHHHHH---TTCEEE
T ss_pred HHHHHh---cCCEEE
Confidence 544332 455444
No 173
>1x7d_A Ornithine cyclodeaminase; binds NAD+, binds L-ornithine, binds L-proline, 2 bundle, beta barrel, rossmann fold, lyase; HET: NAD ORN MES; 1.60A {Pseudomonas putida} SCOP: c.2.1.13 PDB: 1u7h_A*
Probab=97.26 E-value=0.00013 Score=69.53 Aligned_cols=78 Identities=12% Similarity=0.123 Sum_probs=49.1
Q ss_pred CCCcEEEEcCChhhHHHHHHHH------------hhcHHH---Hh-hC----CC--eEecChHHhhcCCCEEEEeeCCcc
Q psy6714 131 NRSDKQIAGTTERGPGALIASL------------NIVSKA---TG-TM----GA--KITFDNKEVTLNSEVIILAVKPHI 188 (303)
Q Consensus 131 ~~mkIgIIGlG~MG~~~La~al------------~r~~e~---l~-e~----Gv--~v~~d~~eav~~ADIVILAVpP~~ 188 (303)
..++|+|||+|.||..+ +..+ +++.++ +. ++ |+ .++.+.+++++++|+||+|++...
T Consensus 128 ~~~~v~iIGaG~~a~~~-a~al~~~~~~~~V~V~~r~~~~a~~la~~~~~~~g~~~~~~~~~~eav~~aDiVi~aTps~~ 206 (350)
T 1x7d_A 128 NARKMALIGNGAQSEFQ-ALAFHKHLGIEEIVAYDTDPLATAKLIANLKEYSGLTIRRASSVAEAVKGVDIITTVTADKA 206 (350)
T ss_dssp TCCEEEEECCSTTHHHH-HHHHHHHSCCCEEEEECSSHHHHHHHHHHHTTCTTCEEEECSSHHHHHTTCSEEEECCCCSS
T ss_pred cCCeEEEECCcHHHHHH-HHHHHHhCCCcEEEEEcCCHHHHHHHHHHHHhccCceEEEeCCHHHHHhcCCEEEEeccCCC
Confidence 35689999999999953 3221 222222 22 21 64 456788899999999999999763
Q ss_pred HHHHHHhhccccCCCCEEEEecCC
Q psy6714 189 VPVALNDIKPVFNESNLLISVAGG 212 (303)
Q Consensus 189 v~~VL~eI~~~L~~g~IVVSiaaG 212 (303)
...++. ...++++++|+ .++.
T Consensus 207 ~~pvl~--~~~l~~G~~V~-~vgs 227 (350)
T 1x7d_A 207 YATIIT--PDMLEPGMHLN-AVGG 227 (350)
T ss_dssp EEEEEC--GGGCCTTCEEE-ECSC
T ss_pred CCceec--HHHcCCCCEEE-ECCC
Confidence 223332 23567888766 4444
No 174
>2b0j_A 5,10-methenyltetrahydromethanopterin hydrogenase; rossmann fold, helix bundle, oxidoreductase; 1.75A {Methanocaldococcus jannaschii} SCOP: a.100.1.11 c.2.1.6 PDB: 3f47_A* 3daf_A* 3dag_A* 3f46_A* 3h65_A*
Probab=97.25 E-value=0.003 Score=59.24 Aligned_cols=118 Identities=15% Similarity=0.297 Sum_probs=82.9
Q ss_pred hCCCeEecChHHhhcCCCEEEEeeCCc-cHHHHHHhhccccCCCCEEEEecCCCcHHHHHhhC---C-CCCceEEEecCc
Q psy6714 161 TMGAKITFDNKEVTLNSEVIILAVKPH-IVPVALNDIKPVFNESNLLISVAGGVPIKNMEQAL---P-KNSRIIRAMPNT 235 (303)
Q Consensus 161 e~Gv~v~~d~~eav~~ADIVILAVpP~-~v~~VL~eI~~~L~~g~IVVSiaaGV~ie~L~~~l---~-~~~~VVr~mPn~ 235 (303)
+.|+++++|..|+++++|++|+=+|-- .-.++++.+.++++.|.+|-+++ -++.-.|...| . .+..|..+||..
T Consensus 126 daGVkVtsDD~EAvk~AEi~IlftPfG~~t~~Iakkii~~lpEgAII~nTC-Tipp~~ly~~le~l~R~DvgIsS~HPaa 204 (358)
T 2b0j_A 126 DVGLKVTSDDREAVEGADIVITWLPKGNKQPDIIKKFADAIPEGAIVTHAC-TIPTTKFAKIFKDLGREDLNITSYHPGC 204 (358)
T ss_dssp GGTCEEESCHHHHHTTCSEEEECCTTCTTHHHHHHHHGGGSCTTCEEEECS-SSCHHHHHHHHHHTTCTTSEEEECBCSS
T ss_pred HcCcEeecchHHHhcCCCEEEEecCCCCCcHHHHHHHHhhCcCCCEEeccc-CCCHHHHHHHHHHhCcccCCeeccCCCC
Confidence 569999999999999999999999844 47789999999998898766554 46554444433 2 344566666542
Q ss_pred -HHhhhCCcEEEEeCCCCCHHHHHHHHHHHHhcCC-cEEcCCCCchhhh
Q psy6714 236 -PALVRQGASVFVRGSSASDQDAQTVINLFKSVGT-CEEVPEYLLDGIT 282 (303)
Q Consensus 236 -p~~v~~G~til~~g~~~~~e~~e~V~~Lfs~iG~-~v~vdE~~~Da~t 282 (303)
|.. .|.+.+-- .-.++++++.+.+|.++.|+ .|.++.+....+.
T Consensus 205 VPgt--~Gq~~~g~-~yAtEEqIeklveLaksa~k~ay~vPAdl~SpV~ 250 (358)
T 2b0j_A 205 VPEM--KGQVYIAE-GYASEEAVNKLYEIGKIARGKAFKMPANLIGPVC 250 (358)
T ss_dssp CTTT--CCCEEEEE-SSSCHHHHHHHHHHHHHHHSCEEEEEHHHHHHHH
T ss_pred CCCC--CCcccccc-ccCCHHHHHHHHHHHHHhCCCeEecchhhccchh
Confidence 333 34443332 34589999999999999987 5667764443333
No 175
>2p2s_A Putative oxidoreductase; YP_050235.1, structural genomics, joint center for structural genomics, JCSG; HET: MSE; 1.25A {Pectobacterium atrosepticum SCRI1043}
Probab=97.25 E-value=0.0029 Score=58.61 Aligned_cols=87 Identities=9% Similarity=0.026 Sum_probs=52.5
Q ss_pred CCcEEEEcCChhhHHHHHHHHh-----------hcH---HH-HhhC-CCeEecChHHhhc--CCCEEEEeeCCccHHHHH
Q psy6714 132 RSDKQIAGTTERGPGALIASLN-----------IVS---KA-TGTM-GAKITFDNKEVTL--NSEVIILAVKPHIVPVAL 193 (303)
Q Consensus 132 ~mkIgIIGlG~MG~~~La~al~-----------r~~---e~-l~e~-Gv~v~~d~~eav~--~ADIVILAVpP~~v~~VL 193 (303)
++||||||+|.||...++..+. ++. +. .+++ ++.+..|..++++ +.|+|++|+|+..-.+++
T Consensus 4 ~~rvgiiG~G~~~~~~~~~~l~~~~~~lvav~d~~~~~~~~~a~~~~~~~~~~~~~~ll~~~~~D~V~i~tp~~~h~~~~ 83 (336)
T 2p2s_A 4 KIRFAAIGLAHNHIYDMCQQLIDAGAELAGVFESDSDNRAKFTSLFPSVPFAASAEQLITDASIDLIACAVIPCDRAELA 83 (336)
T ss_dssp CCEEEEECCSSTHHHHHHHHHHHTTCEEEEEECSCTTSCHHHHHHSTTCCBCSCHHHHHTCTTCCEEEECSCGGGHHHHH
T ss_pred ccEEEEECCChHHHHHhhhhhcCCCcEEEEEeCCCHHHHHHHHHhcCCCcccCCHHHHhhCCCCCEEEEeCChhhHHHHH
Confidence 5799999999999622333221 111 12 2345 5667788888886 689999999977766666
Q ss_pred HhhccccCCCCEEEEec-CCCcHHHHHhh
Q psy6714 194 NDIKPVFNESNLLISVA-GGVPIKNMEQA 221 (303)
Q Consensus 194 ~eI~~~L~~g~IVVSia-aGV~ie~L~~~ 221 (303)
.... ..|+-|+.-. -..+.+..+++
T Consensus 84 ~~al---~aGkhVl~EKP~a~~~~e~~~l 109 (336)
T 2p2s_A 84 LRTL---DAGKDFFTAKPPLTTLEQLDAV 109 (336)
T ss_dssp HHHH---HTTCEEEECSSCCSCHHHHHHH
T ss_pred HHHH---HCCCcEEEeCCCCCCHHHHHHH
Confidence 5433 2455444221 13444544443
No 176
>4f3y_A DHPR, dihydrodipicolinate reductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.10A {Burkholderia thailandensis}
Probab=97.23 E-value=0.0002 Score=66.15 Aligned_cols=83 Identities=19% Similarity=0.148 Sum_probs=56.8
Q ss_pred CCcEEEEc-CChhhHHHHHHHHhhcHH------------H--------Hh--hCCCeEecChHHhhcCCCEEEEeeCCcc
Q psy6714 132 RSDKQIAG-TTERGPGALIASLNIVSK------------A--------TG--TMGAKITFDNKEVTLNSEVIILAVKPHI 188 (303)
Q Consensus 132 ~mkIgIIG-lG~MG~~~La~al~r~~e------------~--------l~--e~Gv~v~~d~~eav~~ADIVILAVpP~~ 188 (303)
||||+|+| +|.||. .++..+....+ . +. ..|+.+..|..++++++|+||-+++|..
T Consensus 7 mikV~V~Ga~G~MG~-~i~~~l~~~~~~eLv~~~d~~~~~~~G~d~gel~g~~~gv~v~~dl~~ll~~~DVVIDfT~p~a 85 (272)
T 4f3y_A 7 SMKIAIAGASGRMGR-MLIEAVLAAPDATLVGALDRTGSPQLGQDAGAFLGKQTGVALTDDIERVCAEADYLIDFTLPEG 85 (272)
T ss_dssp CEEEEESSTTSHHHH-HHHHHHHHCTTEEEEEEBCCTTCTTTTSBTTTTTTCCCSCBCBCCHHHHHHHCSEEEECSCHHH
T ss_pred ccEEEEECCCCHHHH-HHHHHHHhCCCCEEEEEEEecCcccccccHHHHhCCCCCceecCCHHHHhcCCCEEEEcCCHHH
Confidence 68999999 999999 56655332211 0 00 1156667788888889999999999998
Q ss_pred HHHHHHhhccccCCCCEEEEecCCCcHHHH
Q psy6714 189 VPVALNDIKPVFNESNLLISVAGGVPIKNM 218 (303)
Q Consensus 189 v~~VL~eI~~~L~~g~IVVSiaaGV~ie~L 218 (303)
+.+.+..... .+.-+|....|.+.+.+
T Consensus 86 ~~~~~~~al~---~G~~vVigTTG~s~~~~ 112 (272)
T 4f3y_A 86 TLVHLDAALR---HDVKLVIGTTGFSEPQK 112 (272)
T ss_dssp HHHHHHHHHH---HTCEEEECCCCCCHHHH
T ss_pred HHHHHHHHHH---cCCCEEEECCCCCHHHH
Confidence 8887766543 34445555567876543
No 177
>3oj0_A Glutr, glutamyl-tRNA reductase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MSE SO4; 1.65A {Thermoplasma volcanium}
Probab=97.22 E-value=0.00022 Score=58.29 Aligned_cols=75 Identities=12% Similarity=0.138 Sum_probs=48.0
Q ss_pred CCcEEEEcCChhhHHHHHHHH----------hhcHHH----HhhCCCe--EecChHHhhcCCCEEEEeeCCccHHHHHHh
Q psy6714 132 RSDKQIAGTTERGPGALIASL----------NIVSKA----TGTMGAK--ITFDNKEVTLNSEVIILAVKPHIVPVALND 195 (303)
Q Consensus 132 ~mkIgIIGlG~MG~~~La~al----------~r~~e~----l~e~Gv~--v~~d~~eav~~ADIVILAVpP~~v~~VL~e 195 (303)
.++|+|||+|.||. .++..+ ++..++ ..++|+. ...+..++++++|+||.|++.... ++.
T Consensus 21 ~~~v~iiG~G~iG~-~~a~~l~~~g~~v~v~~r~~~~~~~~a~~~~~~~~~~~~~~~~~~~~Divi~at~~~~~--~~~- 96 (144)
T 3oj0_A 21 GNKILLVGNGMLAS-EIAPYFSYPQYKVTVAGRNIDHVRAFAEKYEYEYVLINDIDSLIKNNDVIITATSSKTP--IVE- 96 (144)
T ss_dssp CCEEEEECCSHHHH-HHGGGCCTTTCEEEEEESCHHHHHHHHHHHTCEEEECSCHHHHHHTCSEEEECSCCSSC--SBC-
T ss_pred CCEEEEECCCHHHH-HHHHHHHhCCCEEEEEcCCHHHHHHHHHHhCCceEeecCHHHHhcCCCEEEEeCCCCCc--Eee-
Confidence 57899999999999 454432 222222 2345654 345677888999999999985521 111
Q ss_pred hccccCCCCEEEEecC
Q psy6714 196 IKPVFNESNLLISVAG 211 (303)
Q Consensus 196 I~~~L~~g~IVVSiaa 211 (303)
...++++.+|+.+..
T Consensus 97 -~~~l~~g~~vid~~~ 111 (144)
T 3oj0_A 97 -ERSLMPGKLFIDLGN 111 (144)
T ss_dssp -GGGCCTTCEEEECCS
T ss_pred -HHHcCCCCEEEEccC
Confidence 234567777776643
No 178
>3v5n_A Oxidoreductase; structural genomics, PSI-biology, protein structure initiati nysgrc, NEW YORK structural genomics research consortium; 2.80A {Sinorhizobium meliloti}
Probab=97.13 E-value=0.003 Score=60.81 Aligned_cols=86 Identities=13% Similarity=0.140 Sum_probs=53.7
Q ss_pred CCcEEEEcCCh---hhHHHHHHHH-------------hhcHHH----HhhCCC---eEecChHHhhcC-------CCEEE
Q psy6714 132 RSDKQIAGTTE---RGPGALIASL-------------NIVSKA----TGTMGA---KITFDNKEVTLN-------SEVII 181 (303)
Q Consensus 132 ~mkIgIIGlG~---MG~~~La~al-------------~r~~e~----l~e~Gv---~v~~d~~eav~~-------ADIVI 181 (303)
++||||||+|. ||.. .+..+ ++..++ .+++|+ .+..|.++++++ .|+|+
T Consensus 37 ~~rvgiiG~G~~~~ig~~-h~~~~~~~~~~~lva~v~d~~~~~a~~~a~~~g~~~~~~~~~~~~ll~~~~~~~~~vD~V~ 115 (417)
T 3v5n_A 37 RIRLGMVGGGSGAFIGAV-HRIAARLDDHYELVAGALSSTPEKAEASGRELGLDPSRVYSDFKEMAIREAKLKNGIEAVA 115 (417)
T ss_dssp CEEEEEESCC--CHHHHH-HHHHHHHTSCEEEEEEECCSSHHHHHHHHHHHTCCGGGBCSCHHHHHHHHHHCTTCCSEEE
T ss_pred cceEEEEcCCCchHHHHH-HHHHHhhCCCcEEEEEEeCCCHHHHHHHHHHcCCCcccccCCHHHHHhcccccCCCCcEEE
Confidence 46899999999 9972 22221 112222 235687 577888888865 89999
Q ss_pred EeeCCccHHHHHHhhccccCCCCEEEEec-CCCcHHHHHhh
Q psy6714 182 LAVKPHIVPVALNDIKPVFNESNLLISVA-GGVPIKNMEQA 221 (303)
Q Consensus 182 LAVpP~~v~~VL~eI~~~L~~g~IVVSia-aGV~ie~L~~~ 221 (303)
+|+|+..-.+++.... ..|+-|+.-. -+.+.+..+++
T Consensus 116 I~tp~~~H~~~~~~al---~aGkhVl~EKPla~~~~ea~~l 153 (417)
T 3v5n_A 116 IVTPNHVHYAAAKEFL---KRGIHVICDKPLTSTLADAKKL 153 (417)
T ss_dssp ECSCTTSHHHHHHHHH---TTTCEEEEESSSCSSHHHHHHH
T ss_pred ECCCcHHHHHHHHHHH---hCCCeEEEECCCcCCHHHHHHH
Confidence 9999887777765543 3566565332 13455555544
No 179
>3dr3_A N-acetyl-gamma-glutamyl-phosphate reductase; csgid target, ARGC, essential gene, amino-acid biosynthesis, arginine biosynthesis, cytoplasm; HET: MLT; 2.00A {Shigella flexneri} PDB: 2g17_A
Probab=97.12 E-value=0.0015 Score=61.97 Aligned_cols=147 Identities=13% Similarity=0.181 Sum_probs=82.2
Q ss_pred CCcEEEEc-CChhhHHHHHHHHhhcH----------H-------H-------HhhC-CCeEec--ChHHhhcCCCEEEEe
Q psy6714 132 RSDKQIAG-TTERGPGALIASLNIVS----------K-------A-------TGTM-GAKITF--DNKEVTLNSEVIILA 183 (303)
Q Consensus 132 ~mkIgIIG-lG~MG~~~La~al~r~~----------e-------~-------l~e~-Gv~v~~--d~~eav~~ADIVILA 183 (303)
||||+|+| +|.+|. .|...+.... + . +... .+.+.. +..++++++|+||+|
T Consensus 4 M~kv~IvGatG~vG~-~l~~~L~~~p~~el~~l~s~~~~~saGk~~~~~~p~~~~~~~~~v~~~~~~~~~~~~~Dvvf~a 82 (337)
T 3dr3_A 4 MLNTLIVGASGYAGA-ELVTYVNRHPHMNITALTVSAQSNDAGKLISDLHPQLKGIVELPLQPMSDISEFSPGVDVVFLA 82 (337)
T ss_dssp CEEEEEETTTSHHHH-HHHHHHHHCTTEEEEEEEEETTCTTTTSBHHHHCGGGTTTCCCBEEEESSGGGTCTTCSEEEEC
T ss_pred ceEEEEECCCChHHH-HHHHHHHhCCCCcEEEEEecCchhhcCCchHHhCccccCccceeEeccCCHHHHhcCCCEEEEC
Confidence 68999999 799999 4554432211 0 1 1111 223322 444444899999999
Q ss_pred eCCccHHHHHHhhccccCCCCEEEEecCCC---cHHHHHhhCCCCC-------ceEEEecCcH-HhhhCCcEEEEeCCCC
Q psy6714 184 VKPHIVPVALNDIKPVFNESNLLISVAGGV---PIKNMEQALPKNS-------RIIRAMPNTP-ALVRQGASVFVRGSSA 252 (303)
Q Consensus 184 VpP~~v~~VL~eI~~~L~~g~IVVSiaaGV---~ie~L~~~l~~~~-------~VVr~mPn~p-~~v~~G~til~~g~~~ 252 (303)
+|...-.+++..+. ..|..||+..+.. +.+...++.+... .+|..+|-.. ..+... .+ +..+++
T Consensus 83 ~p~~~s~~~~~~~~---~~g~~vIDlSa~fR~~d~~v~~~wy~~~~~~p~l~~~~vyglPEvn~~~i~~~-~i-IanPgC 157 (337)
T 3dr3_A 83 TAHEVSHDLAPQFL---EAGCVVFDLSGAFRVNDATFYEKYYGFTHQYPELLEQAAYGLAEWCGNKLKEA-NL-IAVPGC 157 (337)
T ss_dssp SCHHHHHHHHHHHH---HTTCEEEECSSTTSSSCHHHHHHHTSSCCSCHHHHHHCEECCTTTCCHHHHTC-SE-EECCCH
T ss_pred CChHHHHHHHHHHH---HCCCEEEEcCCccccCCcccchhhccccccChhhhcceEEEccccCHHHhCCC-CE-EecCCh
Confidence 99888788877654 3677899888775 3344445543211 2466676553 233332 23 344556
Q ss_pred CHHHHHHH-HHHHH--hcCCcEEcCCC-Cchhhhhhccch
Q psy6714 253 SDQDAQTV-INLFK--SVGTCEEVPEY-LLDGITGLSGSG 288 (303)
Q Consensus 253 ~~e~~e~V-~~Lfs--~iG~~v~vdE~-~~Da~tAlsGsg 288 (303)
.......+ ..|.+ .+|. +.- .++...++||.|
T Consensus 158 ~tt~~~l~L~PL~~~g~~~~----~~i~~v~t~~g~SGaG 193 (337)
T 3dr3_A 158 YPTAAQLALKPLIDADLLDL----NQWPVINATSGVSGAG 193 (337)
T ss_dssp HHHHHHHHHHHHHHTTCBCT----TSCCEEEEEECGGGGC
T ss_pred HHHHHHHHHHHHHHcCccCC----CceEEEEEeeccccCC
Confidence 66555544 44554 2442 222 345555555544
No 180
>3m2t_A Probable dehydrogenase; PSI, SGXNY, structural genomics, protein structure initiative; HET: NAD; 2.30A {Chromobacterium violaceum}
Probab=97.11 E-value=0.00078 Score=63.49 Aligned_cols=86 Identities=8% Similarity=-0.004 Sum_probs=53.3
Q ss_pred CCcEEEEcCChhhHHHHHHHHh------------hcHHHH----hhC-CCeEecChHHhhcC--CCEEEEeeCCccHHHH
Q psy6714 132 RSDKQIAGTTERGPGALIASLN------------IVSKAT----GTM-GAKITFDNKEVTLN--SEVIILAVKPHIVPVA 192 (303)
Q Consensus 132 ~mkIgIIGlG~MG~~~La~al~------------r~~e~l----~e~-Gv~v~~d~~eav~~--ADIVILAVpP~~v~~V 192 (303)
++||||||+|.||...++..+. ++.+++ .++ +..+..|.++++++ .|+|++|+|+..-.++
T Consensus 5 ~~rigiIG~G~~g~~~~~~~l~~~~~~~l~av~d~~~~~~~~~a~~~~~~~~~~~~~~ll~~~~vD~V~i~tp~~~H~~~ 84 (359)
T 3m2t_A 5 LIKVGLVGIGAQMQENLLPSLLQMQDIRIVAACDSDLERARRVHRFISDIPVLDNVPAMLNQVPLDAVVMAGPPQLHFEM 84 (359)
T ss_dssp CEEEEEECCSHHHHHTHHHHHHTCTTEEEEEEECSSHHHHGGGGGTSCSCCEESSHHHHHHHSCCSEEEECSCHHHHHHH
T ss_pred cceEEEECCCHHHHHHHHHHHHhCCCcEEEEEEcCCHHHHHHHHHhcCCCcccCCHHHHhcCCCCCEEEEcCCcHHHHHH
Confidence 4689999999999832443332 222222 233 45677889998874 5999999998877777
Q ss_pred HHhhccccCCCCEEEEec-CCCcHHHHHh
Q psy6714 193 LNDIKPVFNESNLLISVA-GGVPIKNMEQ 220 (303)
Q Consensus 193 L~eI~~~L~~g~IVVSia-aGV~ie~L~~ 220 (303)
+.... ..|+-|+.-. -..+.+..++
T Consensus 85 ~~~al---~aGkhVl~EKPla~~~~e~~~ 110 (359)
T 3m2t_A 85 GLLAM---SKGVNVFVEKPPCATLEELET 110 (359)
T ss_dssp HHHHH---HTTCEEEECSCSCSSHHHHHH
T ss_pred HHHHH---HCCCeEEEECCCcCCHHHHHH
Confidence 65543 3455555321 1344444443
No 181
>3bio_A Oxidoreductase, GFO/IDH/MOCA family; structural genomics, MCSG, PSI-2, GFO/IDH/MO family, protein structure initiative; HET: MSE EPE; 1.80A {Porphyromonas gingivalis}
Probab=97.09 E-value=0.00032 Score=65.04 Aligned_cols=72 Identities=11% Similarity=0.060 Sum_probs=44.5
Q ss_pred CCcEEEEcCChhhHHHHHHHHhhc------------HHHHhhCCCe--EecChHHhhcCCCEEEEeeCCccHHHHHHhhc
Q psy6714 132 RSDKQIAGTTERGPGALIASLNIV------------SKATGTMGAK--ITFDNKEVTLNSEVIILAVKPHIVPVALNDIK 197 (303)
Q Consensus 132 ~mkIgIIGlG~MG~~~La~al~r~------------~e~l~e~Gv~--v~~d~~eav~~ADIVILAVpP~~v~~VL~eI~ 197 (303)
++||||||+|+||. .++..+.+. .++++..|+. ...+..+. .++|+||+|+|+..-.+++....
T Consensus 9 ~irv~IIG~G~iG~-~~~~~l~~~~~~elvav~d~~~~~~~~~g~~~~~~~~l~~~-~~~DvViiatp~~~h~~~~~~al 86 (304)
T 3bio_A 9 KIRAAIVGYGNIGR-YALQALREAPDFEIAGIVRRNPAEVPFELQPFRVVSDIEQL-ESVDVALVCSPSREVERTALEIL 86 (304)
T ss_dssp CEEEEEECCSHHHH-HHHHHHHHCTTEEEEEEECC-------CCTTSCEESSGGGS-SSCCEEEECSCHHHHHHHHHHHH
T ss_pred CCEEEEECChHHHH-HHHHHHhcCCCCEEEEEEcCCHHHHHHcCCCcCCHHHHHhC-CCCCEEEECCCchhhHHHHHHHH
Confidence 47899999999999 455544321 2233334543 23344443 68999999999887777765543
Q ss_pred cccCCCCEEEE
Q psy6714 198 PVFNESNLLIS 208 (303)
Q Consensus 198 ~~L~~g~IVVS 208 (303)
..|+-||.
T Consensus 87 ---~aG~~Vi~ 94 (304)
T 3bio_A 87 ---KKGICTAD 94 (304)
T ss_dssp ---TTTCEEEE
T ss_pred ---HcCCeEEE
Confidence 35666663
No 182
>2g1u_A Hypothetical protein TM1088A; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: AMP; 1.50A {Thermotoga maritima} PDB: 3l4b_A*
Probab=97.08 E-value=0.0024 Score=52.62 Aligned_cols=84 Identities=10% Similarity=-0.041 Sum_probs=51.3
Q ss_pred CCCcEEEEcCChhhHHHHHHHHhh----------cHHH---Hh-hCCCeEe-cC---h---HHh-hcCCCEEEEeeCCcc
Q psy6714 131 NRSDKQIAGTTERGPGALIASLNI----------VSKA---TG-TMGAKIT-FD---N---KEV-TLNSEVIILAVKPHI 188 (303)
Q Consensus 131 ~~mkIgIIGlG~MG~~~La~al~r----------~~e~---l~-e~Gv~v~-~d---~---~ea-v~~ADIVILAVpP~~ 188 (303)
..++|.|+|+|.||. .++..+.. ..++ +. ..|+.+. .+ . .++ ++++|+||+|++...
T Consensus 18 ~~~~v~IiG~G~iG~-~la~~L~~~g~~V~vid~~~~~~~~~~~~~g~~~~~~d~~~~~~l~~~~~~~ad~Vi~~~~~~~ 96 (155)
T 2g1u_A 18 KSKYIVIFGCGRLGS-LIANLASSSGHSVVVVDKNEYAFHRLNSEFSGFTVVGDAAEFETLKECGMEKADMVFAFTNDDS 96 (155)
T ss_dssp CCCEEEEECCSHHHH-HHHHHHHHTTCEEEEEESCGGGGGGSCTTCCSEEEESCTTSHHHHHTTTGGGCSEEEECSSCHH
T ss_pred CCCcEEEECCCHHHH-HHHHHHHhCCCeEEEEECCHHHHHHHHhcCCCcEEEecCCCHHHHHHcCcccCCEEEEEeCCcH
Confidence 357899999999999 56655322 2222 33 4566432 22 1 122 567999999999877
Q ss_pred HHHHHHhhccccCCCCEEEEecCCCcH
Q psy6714 189 VPVALNDIKPVFNESNLLISVAGGVPI 215 (303)
Q Consensus 189 v~~VL~eI~~~L~~g~IVVSiaaGV~i 215 (303)
....+..+...+.+...||..+.+...
T Consensus 97 ~~~~~~~~~~~~~~~~~iv~~~~~~~~ 123 (155)
T 2g1u_A 97 TNFFISMNARYMFNVENVIARVYDPEK 123 (155)
T ss_dssp HHHHHHHHHHHTSCCSEEEEECSSGGG
T ss_pred HHHHHHHHHHHHCCCCeEEEEECCHHH
Confidence 666655554443345556666655544
No 183
>3fef_A Putative glucosidase LPLD; gulosidase, structural genomics, unknown function, glycosidase, hydrolase, manganese, metal-binding, NAD, PSI- 2; 2.20A {Bacillus subtilis}
Probab=97.08 E-value=0.00081 Score=66.31 Aligned_cols=97 Identities=12% Similarity=0.222 Sum_probs=60.2
Q ss_pred CCcEEEEcCChhh-HHHHHHHH-------------hhcHHHHh----------h--CCCeEecChHHhhcCCCEEEEeeC
Q psy6714 132 RSDKQIAGTTERG-PGALIASL-------------NIVSKATG----------T--MGAKITFDNKEVTLNSEVIILAVK 185 (303)
Q Consensus 132 ~mkIgIIGlG~MG-~~~La~al-------------~r~~e~l~----------e--~Gv~v~~d~~eav~~ADIVILAVp 185 (303)
+|||+|||.|.|| +..|+..+ +...+++. . ..+..++|..+++++||+||++++
T Consensus 5 ~~KIaVIGaGs~g~g~~la~~l~~~~~~~geV~L~Di~~e~le~~~~~~~~l~~~~~~I~~TtD~~eAl~dADfVI~air 84 (450)
T 3fef_A 5 QIKIAYIGGGSQGWARSLMSDLSIDERMSGTVALYDLDFEAAQKNEVIGNHSGNGRWRYEAVSTLKKALSAADIVIISIL 84 (450)
T ss_dssp CEEEEEETTTCSSHHHHHHHHHHHCSSCCEEEEEECSSHHHHHHHHHHHTTSTTSCEEEEEESSHHHHHTTCSEEEECCC
T ss_pred CCEEEEECCChhHhHHHHHHHHHhccccCCeEEEEeCCHHHHHHHHHHHHHHhccCCeEEEECCHHHHhcCCCEEEeccc
Confidence 4799999999996 22343221 11122211 0 124566788899999999999997
Q ss_pred Ccc--------------------------------------HHHHHHhhccccCCCCEEEEecCCCcH--HHHHhhCCCC
Q psy6714 186 PHI--------------------------------------VPVALNDIKPVFNESNLLISVAGGVPI--KNMEQALPKN 225 (303)
Q Consensus 186 P~~--------------------------------------v~~VL~eI~~~L~~g~IVVSiaaGV~i--e~L~~~l~~~ 225 (303)
+.. +.++++.+..+ .++.++|..++++++ ..+.+.+|.
T Consensus 85 vG~~~~~~~De~ip~k~G~~~~vget~g~GGi~~alr~~~i~~~i~~~i~~~-~p~a~~i~~tNPvdi~t~~~~k~~p~- 162 (450)
T 3fef_A 85 PGSLDDMEVDVHLPERCGIYQSVGDTVGPGGIIRGLRAVPIFAEIARAIRDY-APESWVINYTNPMSVCTRVLYKVFPG- 162 (450)
T ss_dssp SSCHHHHHHHHHGGGGGTCCCSSCSSSHHHHHHHHHHHHHHHHHHHHHHHHH-CTTSEEEECCSSHHHHHHHHHHHCTT-
T ss_pred cCCcccchhhhhhhhccCccccchhhcCCchhhcccccHHHHHHHHHHHHHH-CCCeEEEEecCchHHHHHHHHHHCCC-
Confidence 641 44555556554 367788888888876 334555663
Q ss_pred CceEE
Q psy6714 226 SRIIR 230 (303)
Q Consensus 226 ~~VVr 230 (303)
.+++.
T Consensus 163 ~rviG 167 (450)
T 3fef_A 163 IKAIG 167 (450)
T ss_dssp CEEEE
T ss_pred CCEEE
Confidence 35543
No 184
>1ldn_A L-lactate dehydrogenase; oxidoreductase(CHOH(D)-NAD(A)); HET: FBP NAD; 2.50A {Geobacillus stearothermophilus} SCOP: c.2.1.5 d.162.1.1 PDB: 1ldb_A 2ldb_A*
Probab=97.08 E-value=0.00096 Score=62.26 Aligned_cols=100 Identities=11% Similarity=0.109 Sum_probs=57.2
Q ss_pred CCcEEEEcCChhhHHHHHHHHh------------hcHHH-------Hh----hC--CCeEecChHHhhcCCCEEEEeeCC
Q psy6714 132 RSDKQIAGTTERGPGALIASLN------------IVSKA-------TG----TM--GAKITFDNKEVTLNSEVIILAVKP 186 (303)
Q Consensus 132 ~mkIgIIGlG~MG~~~La~al~------------r~~e~-------l~----e~--Gv~v~~d~~eav~~ADIVILAVpP 186 (303)
+|||+|||+|.||.+ ++..+. ...++ +. .. .+.+..+..+++++||+||++.+.
T Consensus 6 ~~kI~IIGaG~vG~s-la~~l~~~~~~~ev~l~Di~~~~~~~~~~dl~~~~~~~~~~~~i~~~~~~al~~aDvViia~~~ 84 (316)
T 1ldn_A 6 GARVVVIGAGFVGAS-YVFALMNQGIADEIVLIDANESKAIGDAMDFNHGKVFAPKPVDIWHGDYDDCRDADLVVICAGA 84 (316)
T ss_dssp SCEEEEECCSHHHHH-HHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHHHTTSSSSCCEEEECCGGGTTTCSEEEECCSC
T ss_pred CCEEEEECcCHHHHH-HHHHHHhCCCCCEEEEEeCCcchHHHHHhhHHHHhhhcCCCeEEEcCcHHHhCCCCEEEEcCCC
Confidence 579999999999994 554321 11111 11 11 344445556789999999999753
Q ss_pred cc----------------HHHHHHhhccccCCCCEEEEecCCCcHH--HHHhh--CCCCCceEEEecC
Q psy6714 187 HI----------------VPVALNDIKPVFNESNLLISVAGGVPIK--NMEQA--LPKNSRIIRAMPN 234 (303)
Q Consensus 187 ~~----------------v~~VL~eI~~~L~~g~IVVSiaaGV~ie--~L~~~--l~~~~~VVr~mPn 234 (303)
.. +.++++.+..+. ++.+++-..++++.- .+.+. ++. .+++.++.+
T Consensus 85 ~~~~g~~r~dl~~~n~~i~~~i~~~i~~~~-p~a~~iv~tNPv~~~~~~~~~~s~~p~-~rviG~gt~ 150 (316)
T 1ldn_A 85 NQKPGETRLDLVDKNIAIFRSIVESVMASG-FQGLFLVATNPVDILTYATWKFSGLPH-ERVIGSGTI 150 (316)
T ss_dssp CCCTTTCSGGGHHHHHHHHHHHHHHHHHHT-CCSEEEECSSSHHHHHHHHHHHHTCCG-GGEEECTTH
T ss_pred CCCCCCCHHHHHHcChHHHHHHHHHHHHHC-CCCEEEEeCCchHHHHHHHHHHhCCCH-HHEEecccc
Confidence 32 345555666554 555555466666542 23333 332 356666443
No 185
>1guz_A Malate dehydrogenase; oxidoreductase, tricarboxylic acid cycle, NAD; HET: NAD; 2.0A {Chlorobium vibrioforme} SCOP: c.2.1.5 d.162.1.1 PDB: 1gv1_A 1gv0_A*
Probab=97.07 E-value=0.00041 Score=64.51 Aligned_cols=95 Identities=21% Similarity=0.219 Sum_probs=54.4
Q ss_pred CcEEEEcCChhhHHHHHHHHhh------------cHHH-------Hhh------CC--CeEecChHHhhcCCCEEEEeeC
Q psy6714 133 SDKQIAGTTERGPGALIASLNI------------VSKA-------TGT------MG--AKITFDNKEVTLNSEVIILAVK 185 (303)
Q Consensus 133 mkIgIIGlG~MG~~~La~al~r------------~~e~-------l~e------~G--v~v~~d~~eav~~ADIVILAVp 185 (303)
|||+|||+|.||.+ ++..+.. ..++ +.. .. +..+.+..+ +++||+||+|++
T Consensus 1 mkI~VIGaG~vG~~-la~~la~~~~g~~V~l~D~~~~~~~~~~~~l~~~~~~~~~~~~i~~t~d~~~-l~~aDvViiav~ 78 (310)
T 1guz_A 1 MKITVIGAGNVGAT-TAFRLAEKQLARELVLLDVVEGIPQGKALDMYESGPVGLFDTKVTGSNDYAD-TANSDIVIITAG 78 (310)
T ss_dssp CEEEEECCSHHHHH-HHHHHHHTTCCSEEEEECSSSSHHHHHHHHHHTTHHHHTCCCEEEEESCGGG-GTTCSEEEECCS
T ss_pred CEEEEECCCHHHHH-HHHHHHhCCCCCEEEEEeCChhHHHHHHHhHHhhhhcccCCcEEEECCCHHH-HCCCCEEEEeCC
Confidence 79999999999994 5443211 1111 111 12 233456555 899999999995
Q ss_pred Cc----------------cHHHHHHhhccccCCCCEEEEecCCCcHH--HHHhh--CCCCCceEEE
Q psy6714 186 PH----------------IVPVALNDIKPVFNESNLLISVAGGVPIK--NMEQA--LPKNSRIIRA 231 (303)
Q Consensus 186 P~----------------~v~~VL~eI~~~L~~g~IVVSiaaGV~ie--~L~~~--l~~~~~VVr~ 231 (303)
.. .+.++++.+.++. ++.+||...+++..- .+.+. ++. .+++..
T Consensus 79 ~p~~~g~~r~dl~~~n~~i~~~i~~~i~~~~-~~~~viv~tNP~~~~~~~~~~~~~~~~-~rviG~ 142 (310)
T 1guz_A 79 LPRKPGMTREDLLMKNAGIVKEVTDNIMKHS-KNPIIIVVSNPLDIMTHVAWVRSGLPK-ERVIGM 142 (310)
T ss_dssp CCCCTTCCHHHHHHHHHHHHHHHHHHHHHHC-SSCEEEECCSSHHHHHHHHHHHHCSCG-GGEEEE
T ss_pred CCCCCCCCHHHHHHHHHHHHHHHHHHHHHhC-CCcEEEEEcCchHHHHHHHHHhcCCCh-HHEEEC
Confidence 21 1245556666664 555666677766542 23332 442 356655
No 186
>3ce6_A Adenosylhomocysteinase; protein-substrate complex, dimer of dimers, NAD binding DOMA amino acid insertional region, hydrolase; HET: ADN NAD; 1.60A {Mycobacterium tuberculosis} PDB: 3dhy_A* 2zj0_A* 2ziz_A* 2zj1_A*
Probab=97.05 E-value=0.0025 Score=63.57 Aligned_cols=152 Identities=10% Similarity=0.108 Sum_probs=83.4
Q ss_pred CCcEEEEcCChhhHHHHHHHHh----------hcHH---HHhhCCCeEecChHHhhcCCCEEEEeeCCcc-HH-HHHHhh
Q psy6714 132 RSDKQIAGTTERGPGALIASLN----------IVSK---ATGTMGAKITFDNKEVTLNSEVIILAVKPHI-VP-VALNDI 196 (303)
Q Consensus 132 ~mkIgIIGlG~MG~~~La~al~----------r~~e---~l~e~Gv~v~~d~~eav~~ADIVILAVpP~~-v~-~VL~eI 196 (303)
.++|+|||+|.||. .++..++ .... .+.+.|+.+ .+..++++.+|+||+|+.... +. +.+.
T Consensus 274 GktV~IiG~G~IG~-~~A~~lka~Ga~Viv~d~~~~~~~~A~~~Ga~~-~~l~e~l~~aDvVi~atgt~~~i~~~~l~-- 349 (494)
T 3ce6_A 274 GKKVLICGYGDVGK-GCAEAMKGQGARVSVTEIDPINALQAMMEGFDV-VTVEEAIGDADIVVTATGNKDIIMLEHIK-- 349 (494)
T ss_dssp TCEEEEECCSHHHH-HHHHHHHHTTCEEEEECSCHHHHHHHHHTTCEE-CCHHHHGGGCSEEEECSSSSCSBCHHHHH--
T ss_pred cCEEEEEccCHHHH-HHHHHHHHCCCEEEEEeCCHHHHHHHHHcCCEE-ecHHHHHhCCCEEEECCCCHHHHHHHHHH--
Confidence 57899999999999 4554432 2222 345678864 567788899999999997544 33 3333
Q ss_pred ccccCCCCEEEEecCC---CcHHHHHh-hCCCCCce---EE--EecC--cHH-hhhCCcEE-EE-eCCCC--------CH
Q psy6714 197 KPVFNESNLLISVAGG---VPIKNMEQ-ALPKNSRI---IR--AMPN--TPA-LVRQGASV-FV-RGSSA--------SD 254 (303)
Q Consensus 197 ~~~L~~g~IVVSiaaG---V~ie~L~~-~l~~~~~V---Vr--~mPn--~p~-~v~~G~ti-l~-~g~~~--------~~ 254 (303)
.++++.+||.+.-+ ++...|.. .+.. ..+ +. ..|. .+. .+..|... +. ..++. ..
T Consensus 350 --~mk~ggilvnvG~~~~eId~~aL~~~aL~~-~~I~~~ldv~~~~~~~~~l~LL~~grlvnL~~~TPH~a~~~~~s~~~ 426 (494)
T 3ce6_A 350 --AMKDHAILGNIGHFDNEIDMAGLERSGATR-VNVKPQVDLWTFGDTGRSIIVLSEGRLLNLGNATGHPSFVMSNSFAN 426 (494)
T ss_dssp --HSCTTCEEEECSSSGGGBCHHHHHHTTCEE-EEEETTEEEEECTTTCCEEEEEGGGSCHHHHHSCCSCHHHHHHHHHH
T ss_pred --hcCCCcEEEEeCCCCCccCHHHHHHhhhcc-ceEEEEEEEeecCCcchHHHHHhCCCEEeccCCCCCccccchHHHHH
Confidence 35577777755322 34445544 2311 011 11 1121 110 01111110 00 00111 12
Q ss_pred HHHHHHHHHHH--hcCCcEEcCCCCchhhhhhccchHHH
Q psy6714 255 QDAQTVINLFK--SVGTCEEVPEYLLDGITGLSGSGPAY 291 (303)
Q Consensus 255 e~~e~V~~Lfs--~iG~~v~vdE~~~Da~tAlsGsgPAf 291 (303)
+..+.+..+++ .+|..+.+.+++||..+|.. ..|.+
T Consensus 427 qa~~ai~~~~~g~~~~~~V~~~P~~~De~vA~l-hL~~l 464 (494)
T 3ce6_A 427 QTIAQIELWTKNDEYDNEVYRLPKHLDEKVARI-HVEAL 464 (494)
T ss_dssp HHHHHHHHHHTGGGCCSSEECCCHHHHHHHHHH-HHHHH
T ss_pred HHHHHHHHHHcCCCCCCEEEECHHHHHHHHHHh-hHHHH
Confidence 34455555555 56777888888899999887 67765
No 187
>1zh8_A Oxidoreductase; TM0312, structural genomics, JO center for structural genomics, JCSG, protein structure INI PSI; HET: MSE NAP; 2.50A {Thermotoga maritima} SCOP: c.2.1.3 d.81.1.5
Probab=96.97 E-value=0.0057 Score=57.01 Aligned_cols=87 Identities=8% Similarity=0.041 Sum_probs=54.6
Q ss_pred CCCcEEEEcCC-hhhHHHHHHHHhh-------------cHHH----HhhCCC-eEecChHHhhc--CCCEEEEeeCCccH
Q psy6714 131 NRSDKQIAGTT-ERGPGALIASLNI-------------VSKA----TGTMGA-KITFDNKEVTL--NSEVIILAVKPHIV 189 (303)
Q Consensus 131 ~~mkIgIIGlG-~MG~~~La~al~r-------------~~e~----l~e~Gv-~v~~d~~eav~--~ADIVILAVpP~~v 189 (303)
.++||||||+| .||. ..+..+.. ..++ .+++|+ .+..|.+++++ +.|+|++|+|+..-
T Consensus 17 ~~irvgiIG~G~~~g~-~~~~~l~~~~~~~~lvav~d~~~~~~~~~a~~~~~~~~~~~~~~ll~~~~vD~V~i~tp~~~H 95 (340)
T 1zh8_A 17 RKIRLGIVGCGIAARE-LHLPALKNLSHLFEITAVTSRTRSHAEEFAKMVGNPAVFDSYEELLESGLVDAVDLTLPVELN 95 (340)
T ss_dssp CCEEEEEECCSHHHHH-THHHHHHTTTTTEEEEEEECSSHHHHHHHHHHHSSCEEESCHHHHHHSSCCSEEEECCCGGGH
T ss_pred CceeEEEEecCHHHHH-HHHHHHHhCCCceEEEEEEcCCHHHHHHHHHHhCCCcccCCHHHHhcCCCCCEEEEeCCchHH
Confidence 35799999999 7887 33333222 1122 234576 67888888886 58999999998877
Q ss_pred HHHHHhhccccCCCCEEEEec-CCCcHHHHHhh
Q psy6714 190 PVALNDIKPVFNESNLLISVA-GGVPIKNMEQA 221 (303)
Q Consensus 190 ~~VL~eI~~~L~~g~IVVSia-aGV~ie~L~~~ 221 (303)
.+++.... ..|+-|+.-. -..+.+..+++
T Consensus 96 ~~~~~~al---~aGkhVl~EKPla~~~~ea~~l 125 (340)
T 1zh8_A 96 LPFIEKAL---RKGVHVICEKPISTDVETGKKV 125 (340)
T ss_dssp HHHHHHHH---HTTCEEEEESSSSSSHHHHHHH
T ss_pred HHHHHHHH---HCCCcEEEeCCCCCCHHHHHHH
Confidence 66665543 2455555321 12355555444
No 188
>1v8b_A Adenosylhomocysteinase; hydrolase; HET: NAD ADN; 2.40A {Plasmodium falciparum} SCOP: c.2.1.4 c.23.12.3
Probab=96.94 E-value=0.002 Score=64.02 Aligned_cols=86 Identities=10% Similarity=0.058 Sum_probs=57.3
Q ss_pred CCCcEEEEcCChhhHHHHHHHHh----------hcHH---HHhhCCCeEecChHHhhcCCCEEEEeeCCccHHHHHHhhc
Q psy6714 131 NRSDKQIAGTTERGPGALIASLN----------IVSK---ATGTMGAKITFDNKEVTLNSEVIILAVKPHIVPVALNDIK 197 (303)
Q Consensus 131 ~~mkIgIIGlG~MG~~~La~al~----------r~~e---~l~e~Gv~v~~d~~eav~~ADIVILAVpP~~v~~VL~eI~ 197 (303)
..++|+|||+|.||. .++..++ +... .....|+.+ .+..+++++||+|++++....+.. .+..
T Consensus 256 ~GktVgIIG~G~IG~-~vA~~l~~~G~~Viv~d~~~~~~~~a~~~g~~~-~~l~ell~~aDiVi~~~~t~~lI~--~~~l 331 (479)
T 1v8b_A 256 SGKIVVICGYGDVGK-GCASSMKGLGARVYITEIDPICAIQAVMEGFNV-VTLDEIVDKGDFFITCTGNVDVIK--LEHL 331 (479)
T ss_dssp TTSEEEEECCSHHHH-HHHHHHHHHTCEEEEECSCHHHHHHHHTTTCEE-CCHHHHTTTCSEEEECCSSSSSBC--HHHH
T ss_pred CCCEEEEEeeCHHHH-HHHHHHHhCcCEEEEEeCChhhHHHHHHcCCEe-cCHHHHHhcCCEEEECCChhhhcC--HHHH
Confidence 467899999999999 4555432 2222 233567765 578899999999999975333211 1222
Q ss_pred cccCCCCEEEEecCC---CcHHHHHh
Q psy6714 198 PVFNESNLLISVAGG---VPIKNMEQ 220 (303)
Q Consensus 198 ~~L~~g~IVVSiaaG---V~ie~L~~ 220 (303)
..++++.+||.+.-| |+.+.|.+
T Consensus 332 ~~MK~gailiNvgrg~~EId~~aL~~ 357 (479)
T 1v8b_A 332 LKMKNNAVVGNIGHFDDEIQVNELFN 357 (479)
T ss_dssp TTCCTTCEEEECSSTTTSBCHHHHHT
T ss_pred hhcCCCcEEEEeCCCCccccchhhhc
Confidence 346688899977655 46677766
No 189
>4gqa_A NAD binding oxidoreductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; HET: MSE; 2.42A {Klebsiella pneumoniae}
Probab=96.93 E-value=0.0073 Score=57.51 Aligned_cols=87 Identities=14% Similarity=0.080 Sum_probs=54.3
Q ss_pred CCcEEEEcCChhhHHHHHHHHh--------------------hcHHH----HhhCCC-eEecChHHhhc--CCCEEEEee
Q psy6714 132 RSDKQIAGTTERGPGALIASLN--------------------IVSKA----TGTMGA-KITFDNKEVTL--NSEVIILAV 184 (303)
Q Consensus 132 ~mkIgIIGlG~MG~~~La~al~--------------------r~~e~----l~e~Gv-~v~~d~~eav~--~ADIVILAV 184 (303)
++||||||+|.||. ..+..+. .+.++ .+++|+ .+..|.+++++ +.|+|++|+
T Consensus 26 klrvgiIG~G~ig~-~h~~~~~~~~~~~~~~~~~~elvav~d~~~~~a~~~a~~~~~~~~y~d~~~ll~~~~vD~V~I~t 104 (412)
T 4gqa_A 26 RLNIGLIGSGFMGQ-AHADAYRRAAMFYPDLPKRPHLYALADQDQAMAERHAAKLGAEKAYGDWRELVNDPQVDVVDITS 104 (412)
T ss_dssp EEEEEEECCSHHHH-HHHHHHHHHHHHCTTSSSEEEEEEEECSSHHHHHHHHHHHTCSEEESSHHHHHHCTTCCEEEECS
T ss_pred cceEEEEcCcHHHH-HHHHHHHhccccccccCCCeEEEEEEcCCHHHHHHHHHHcCCCeEECCHHHHhcCCCCCEEEECC
Confidence 57999999999997 3332221 12222 245677 57788899886 579999999
Q ss_pred CCccHHHHHHhhccccCCCCEEEEec-CCCcHHHHHhhC
Q psy6714 185 KPHIVPVALNDIKPVFNESNLLISVA-GGVPIKNMEQAL 222 (303)
Q Consensus 185 pP~~v~~VL~eI~~~L~~g~IVVSia-aGV~ie~L~~~l 222 (303)
|+..=.+++.... ..|+-|+.-. -+.+.++.++++
T Consensus 105 p~~~H~~~~~~al---~aGkhVl~EKP~a~~~~ea~~l~ 140 (412)
T 4gqa_A 105 PNHLHYTMAMAAI---AAGKHVYCEKPLAVNEQQAQEMA 140 (412)
T ss_dssp CGGGHHHHHHHHH---HTTCEEEEESCSCSSHHHHHHHH
T ss_pred CcHHHHHHHHHHH---HcCCCeEeecCCcCCHHHHHHHH
Confidence 9777666665433 2455555221 134555555543
No 190
>2hjr_A Malate dehydrogenase; malaria, structural genomics, structural genomics consortium, SGC, oxidoreductase; HET: CIT APR; 2.20A {Cryptosporidium parvum}
Probab=96.93 E-value=0.0021 Score=60.34 Aligned_cols=81 Identities=19% Similarity=0.242 Sum_probs=49.5
Q ss_pred CCcEEEEcCChhhHHHHHHHH-h----------hcHHH-------H----hh--C--CCeEecChHHhhcCCCEEEEeeC
Q psy6714 132 RSDKQIAGTTERGPGALIASL-N----------IVSKA-------T----GT--M--GAKITFDNKEVTLNSEVIILAVK 185 (303)
Q Consensus 132 ~mkIgIIGlG~MG~~~La~al-~----------r~~e~-------l----~e--~--Gv~v~~d~~eav~~ADIVILAVp 185 (303)
+|||+|||.|.||.+ ++..+ . ...++ + .. . .+..+.|. +++++||+||+++.
T Consensus 14 ~~kI~ViGaG~vG~~-iA~~la~~g~~~V~L~Di~~~~l~~~~~~l~~~~~~~~~~~~i~~t~d~-~al~~aD~VI~avg 91 (328)
T 2hjr_A 14 RKKISIIGAGQIGST-IALLLGQKDLGDVYMFDIIEGVPQGKALDLNHCMALIGSPAKIFGENNY-EYLQNSDVVIITAG 91 (328)
T ss_dssp CCEEEEECCSHHHHH-HHHHHHHTTCCEEEEECSSTTHHHHHHHHHHHHHHHHTCCCCEEEESCG-GGGTTCSEEEECCS
T ss_pred CCEEEEECCCHHHHH-HHHHHHhCCCCeEEEEECCHHHHHHHHHHHHhHhhccCCCCEEEECCCH-HHHCCCCEEEEcCC
Confidence 479999999999995 44331 0 11111 1 11 1 23444566 78899999999993
Q ss_pred -Cc---------------cHHHHHHhhccccCCCCEEEEecCCCcH
Q psy6714 186 -PH---------------IVPVALNDIKPVFNESNLLISVAGGVPI 215 (303)
Q Consensus 186 -P~---------------~v~~VL~eI~~~L~~g~IVVSiaaGV~i 215 (303)
|. .+.++++++..+. ++.+||-..+.++.
T Consensus 92 ~p~k~g~tr~dl~~~n~~i~~~i~~~i~~~~-p~a~viv~tNP~~~ 136 (328)
T 2hjr_A 92 VPRKPNMTRSDLLTVNAKIVGSVAENVGKYC-PNAFVICITNPLDA 136 (328)
T ss_dssp CCCCTTCCSGGGHHHHHHHHHHHHHHHHHHC-TTCEEEECCSSHHH
T ss_pred CCCCCCCchhhHHhhhHHHHHHHHHHHHHHC-CCeEEEEecCchHH
Confidence 21 2566777777665 66666545555543
No 191
>3kb6_A D-lactate dehydrogenase; oxidoreductase, D-LDH, NAD, structural genomics, NPPSFA, NAT project on protein structural and functional analyses; HET: MSE NAD 1PE; 2.12A {Aquifex aeolicus}
Probab=96.90 E-value=0.00081 Score=63.61 Aligned_cols=93 Identities=20% Similarity=0.201 Sum_probs=60.0
Q ss_pred cCCCcEEEEcCChhhHHHHHHHHh----------hc-HHHHhhCCCeEecChHHhhcCCCEEEEeeCC-ccHHHHH-Hhh
Q psy6714 130 WNRSDKQIAGTTERGPGALIASLN----------IV-SKATGTMGAKITFDNKEVTLNSEVIILAVKP-HIVPVAL-NDI 196 (303)
Q Consensus 130 ~~~mkIgIIGlG~MG~~~La~al~----------r~-~e~l~e~Gv~v~~d~~eav~~ADIVILAVpP-~~v~~VL-~eI 196 (303)
+..+++||||+|.||. .++..++ .. .+...+.|+.. .+..+++++||+|++++|- .....++ ++.
T Consensus 139 l~g~tvGIiG~G~IG~-~va~~~~~fg~~v~~~d~~~~~~~~~~~~~~-~~l~ell~~sDivslh~Plt~~T~~li~~~~ 216 (334)
T 3kb6_A 139 LNRLTLGVIGTGRIGS-RVAMYGLAFGMKVLCYDVVKREDLKEKGCVY-TSLDELLKESDVISLHVPYTKETHHMINEER 216 (334)
T ss_dssp GGGSEEEEECCSHHHH-HHHHHHHHTTCEEEEECSSCCHHHHHTTCEE-CCHHHHHHHCSEEEECCCCCTTTTTCBCHHH
T ss_pred ecCcEEEEECcchHHH-HHHHhhcccCceeeecCCccchhhhhcCcee-cCHHHHHhhCCEEEEcCCCChhhccCcCHHH
Confidence 4467899999999999 4654422 11 12334556653 5788999999999999983 3333333 122
Q ss_pred ccccCCCCEEEEecCC--CcHHHHHhhCCC
Q psy6714 197 KPVFNESNLLISVAGG--VPIKNMEQALPK 224 (303)
Q Consensus 197 ~~~L~~g~IVVSiaaG--V~ie~L~~~l~~ 224 (303)
...++++.++|.+.=| |+.+.|.+.|..
T Consensus 217 l~~mk~~a~lIN~aRG~iVde~aL~~aL~~ 246 (334)
T 3kb6_A 217 ISLMKDGVYLINTARGKVVDTDALYRAYQR 246 (334)
T ss_dssp HHHSCTTEEEEECSCGGGBCHHHHHHHHHT
T ss_pred HhhcCCCeEEEecCccccccHHHHHHHHHh
Confidence 2346688899987733 344667776653
No 192
>3ic5_A Putative saccharopine dehydrogenase; structural genomics, APC63807.2, N-terminal domain, saccharo dehydrogenase, PSI-2; HET: MSE; 2.08A {Ruegeria pomeroyi}
Probab=96.89 E-value=0.0025 Score=48.83 Aligned_cols=77 Identities=16% Similarity=0.124 Sum_probs=47.3
Q ss_pred CCCcEEEEcCChhhHHHHHHHHh-----------hcHHH---HhhCCCeEe-------cChHHhhcCCCEEEEeeCCccH
Q psy6714 131 NRSDKQIAGTTERGPGALIASLN-----------IVSKA---TGTMGAKIT-------FDNKEVTLNSEVIILAVKPHIV 189 (303)
Q Consensus 131 ~~mkIgIIGlG~MG~~~La~al~-----------r~~e~---l~e~Gv~v~-------~d~~eav~~ADIVILAVpP~~v 189 (303)
++|+|.|+|.|.||.. ++..+. +..++ +...|+... .+..++++++|+||.|+++...
T Consensus 4 ~~~~v~I~G~G~iG~~-~~~~l~~~g~~~v~~~~r~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~d~vi~~~~~~~~ 82 (118)
T 3ic5_A 4 MRWNICVVGAGKIGQM-IAALLKTSSNYSVTVADHDLAALAVLNRMGVATKQVDAKDEAGLAKALGGFDAVISAAPFFLT 82 (118)
T ss_dssp TCEEEEEECCSHHHHH-HHHHHHHCSSEEEEEEESCHHHHHHHHTTTCEEEECCTTCHHHHHHHTTTCSEEEECSCGGGH
T ss_pred CcCeEEEECCCHHHHH-HHHHHHhCCCceEEEEeCCHHHHHHHHhCCCcEEEecCCCHHHHHHHHcCCCEEEECCCchhh
Confidence 4679999999999994 554421 12222 234455432 1223566789999999988777
Q ss_pred HHHHHhhccccCCCCEEEEecC
Q psy6714 190 PVALNDIKPVFNESNLLISVAG 211 (303)
Q Consensus 190 ~~VL~eI~~~L~~g~IVVSiaa 211 (303)
..++..... .+..++.+.+
T Consensus 83 ~~~~~~~~~---~g~~~~~~~~ 101 (118)
T 3ic5_A 83 PIIAKAAKA---AGAHYFDLTE 101 (118)
T ss_dssp HHHHHHHHH---TTCEEECCCS
T ss_pred HHHHHHHHH---hCCCEEEecC
Confidence 777655433 3444554443
No 193
>3c85_A Putative glutathione-regulated potassium-efflux S protein KEFB; TRKA domain; HET: AMP; 1.90A {Vibrio parahaemolyticus rimd 2210633}
Probab=96.88 E-value=0.0024 Score=53.72 Aligned_cols=79 Identities=18% Similarity=0.210 Sum_probs=45.5
Q ss_pred CCcEEEEcCChhhHHHHHHHHhhc-----------HH---HHhhCCCeEe-cC---h---HHh--hcCCCEEEEeeCCcc
Q psy6714 132 RSDKQIAGTTERGPGALIASLNIV-----------SK---ATGTMGAKIT-FD---N---KEV--TLNSEVIILAVKPHI 188 (303)
Q Consensus 132 ~mkIgIIGlG~MG~~~La~al~r~-----------~e---~l~e~Gv~v~-~d---~---~ea--v~~ADIVILAVpP~~ 188 (303)
.++|.|+|+|.||. .++..+... .+ .+.+.|+.+. .| . .++ ++++|+||+|++...
T Consensus 39 ~~~v~IiG~G~~G~-~~a~~L~~~~g~~V~vid~~~~~~~~~~~~g~~~~~gd~~~~~~l~~~~~~~~ad~vi~~~~~~~ 117 (183)
T 3c85_A 39 HAQVLILGMGRIGT-GAYDELRARYGKISLGIEIREEAAQQHRSEGRNVISGDATDPDFWERILDTGHVKLVLLAMPHHQ 117 (183)
T ss_dssp TCSEEEECCSHHHH-HHHHHHHHHHCSCEEEEESCHHHHHHHHHTTCCEEECCTTCHHHHHTBCSCCCCCEEEECCSSHH
T ss_pred CCcEEEECCCHHHH-HHHHHHHhccCCeEEEEECCHHHHHHHHHCCCCEEEcCCCCHHHHHhccCCCCCCEEEEeCCChH
Confidence 56899999999999 465543221 12 3445677532 22 1 233 568999999998654
Q ss_pred HH-HHHHhhccccCCCCEEEEecCC
Q psy6714 189 VP-VALNDIKPVFNESNLLISVAGG 212 (303)
Q Consensus 189 v~-~VL~eI~~~L~~g~IVVSiaaG 212 (303)
.. .++..++. +.++..||..+.+
T Consensus 118 ~~~~~~~~~~~-~~~~~~ii~~~~~ 141 (183)
T 3c85_A 118 GNQTALEQLQR-RNYKGQIAAIAEY 141 (183)
T ss_dssp HHHHHHHHHHH-TTCCSEEEEEESS
T ss_pred HHHHHHHHHHH-HCCCCEEEEEECC
Confidence 43 33333333 3344445544433
No 194
>2i6t_A Ubiquitin-conjugating enzyme E2-like isoform A; L-lactate dehydrogenase, oxidoreductase, ubiquitin-protein L unknown function; 2.10A {Homo sapiens} PDB: 3dl2_A
Probab=96.87 E-value=0.0021 Score=59.98 Aligned_cols=81 Identities=15% Similarity=0.210 Sum_probs=49.9
Q ss_pred CCcEEEEcCChhhHHHHHHHH------------hhcHH------HHh---hCCCeEecChHHhhcCCCEEEEeeCC----
Q psy6714 132 RSDKQIAGTTERGPGALIASL------------NIVSK------ATG---TMGAKITFDNKEVTLNSEVIILAVKP---- 186 (303)
Q Consensus 132 ~mkIgIIGlG~MG~~~La~al------------~r~~e------~l~---e~Gv~v~~d~~eav~~ADIVILAVpP---- 186 (303)
++||+|||.|.||.+ ++..+ +...+ .+. ...+..+.|. +.+++||+||+++-.
T Consensus 14 ~~kV~ViGaG~vG~~-~a~~l~~~g~~~ev~L~Di~~~~~g~a~dl~~~~~~~i~~t~d~-~~l~~aD~Vi~aag~~~pG 91 (303)
T 2i6t_A 14 VNKITVVGGGELGIA-CTLAISAKGIADRLVLLDLSEGTKGATMDLEIFNLPNVEISKDL-SASAHSKVVIFTVNSLGSS 91 (303)
T ss_dssp CCEEEEECCSHHHHH-HHHHHHHHTCCSEEEEECCC-----CHHHHHHHTCTTEEEESCG-GGGTTCSEEEECCCC----
T ss_pred CCEEEEECCCHHHHH-HHHHHHhcCCCCEEEEEcCCcchHHHHHHHhhhcCCCeEEeCCH-HHHCCCCEEEEcCCCCCCC
Confidence 689999999999974 33221 11111 111 1134555666 778999999999721
Q ss_pred -----------ccHHHHHHhhccccCCCCEEEEecCCCcH
Q psy6714 187 -----------HIVPVALNDIKPVFNESNLLISVAGGVPI 215 (303)
Q Consensus 187 -----------~~v~~VL~eI~~~L~~g~IVVSiaaGV~i 215 (303)
..+.++++++..+. ++.+||-..+.++.
T Consensus 92 ~tR~dl~~~n~~i~~~i~~~i~~~~-p~a~iiv~sNP~~~ 130 (303)
T 2i6t_A 92 QSYLDVVQSNVDMFRALVPALGHYS-QHSVLLVASQPVEI 130 (303)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHHHT-TTCEEEECSSSHHH
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHhC-CCeEEEEcCChHHH
Confidence 12556667777655 66676657776654
No 195
>2ixa_A Alpha-N-acetylgalactosaminidase; NAD, A-ECO conversion, hydrolase; HET: NAD; 2.3A {Flavobacterium meningosepticum} PDB: 2ixb_A*
Probab=96.86 E-value=0.0045 Score=59.95 Aligned_cols=85 Identities=11% Similarity=0.048 Sum_probs=52.3
Q ss_pred CCcEEEEcCChhhHHHHHHHHh------------hcHHHH-------hhCC---CeEec----ChHHhhc--CCCEEEEe
Q psy6714 132 RSDKQIAGTTERGPGALIASLN------------IVSKAT-------GTMG---AKITF----DNKEVTL--NSEVIILA 183 (303)
Q Consensus 132 ~mkIgIIGlG~MG~~~La~al~------------r~~e~l-------~e~G---v~v~~----d~~eav~--~ADIVILA 183 (303)
++||||||+|.||.. .+..+. +..+++ .++| ..+.. |.+++++ +.|+|++|
T Consensus 20 ~~rvgiIG~G~~g~~-h~~~l~~~~~~~lvav~d~~~~~~~~~a~~~~~~g~~~~~~~~~~~~~~~~ll~~~~vD~V~i~ 98 (444)
T 2ixa_A 20 KVRIAFIAVGLRGQT-HVENMARRDDVEIVAFADPDPYMVGRAQEILKKNGKKPAKVFGNGNDDYKNMLKDKNIDAVFVS 98 (444)
T ss_dssp CEEEEEECCSHHHHH-HHHHHHTCTTEEEEEEECSCHHHHHHHHHHHHHTTCCCCEEECSSTTTHHHHTTCTTCCEEEEC
T ss_pred CceEEEEecCHHHHH-HHHHHHhCCCcEEEEEEeCCHHHHHHHHHHHHhcCCCCCceeccCCCCHHHHhcCCCCCEEEEc
Confidence 579999999999984 333322 112221 1346 46666 8888886 58999999
Q ss_pred eCCccHHHHHHhhccccCCCCEEEEec-CCCcHHHHHh
Q psy6714 184 VKPHIVPVALNDIKPVFNESNLLISVA-GGVPIKNMEQ 220 (303)
Q Consensus 184 VpP~~v~~VL~eI~~~L~~g~IVVSia-aGV~ie~L~~ 220 (303)
+|+..-.+++.... ..|+-|+.-. -..+.+..++
T Consensus 99 tp~~~h~~~~~~al---~aGkhV~~EKP~a~~~~ea~~ 133 (444)
T 2ixa_A 99 SPWEWHHEHGVAAM---KAGKIVGMEVSGAITLEECWD 133 (444)
T ss_dssp CCGGGHHHHHHHHH---HTTCEEEECCCCCSSHHHHHH
T ss_pred CCcHHHHHHHHHHH---HCCCeEEEeCCCcCCHHHHHH
Confidence 99877666665433 3566555321 1344544433
No 196
>3dty_A Oxidoreductase, GFO/IDH/MOCA family; MGCL2, tetramer, PSI-2, 11131, NYSGXRC, structural genomics, protein structure initiative; 2.04A {Pseudomonas syringae PV}
Probab=96.85 E-value=0.0063 Score=57.96 Aligned_cols=85 Identities=8% Similarity=-0.018 Sum_probs=53.9
Q ss_pred CCcEEEEcCCh---hhHHHHHHHH-------------hhcHHH----HhhCCC---eEecChHHhhcC-------CCEEE
Q psy6714 132 RSDKQIAGTTE---RGPGALIASL-------------NIVSKA----TGTMGA---KITFDNKEVTLN-------SEVII 181 (303)
Q Consensus 132 ~mkIgIIGlG~---MG~~~La~al-------------~r~~e~----l~e~Gv---~v~~d~~eav~~-------ADIVI 181 (303)
++||||||+|. ||.. .+..+ ++..++ .+++|+ .+..|.++++++ .|+|+
T Consensus 12 ~~rvgiiG~G~~~~ig~~-h~~~~~~~~~~~lva~v~d~~~~~a~~~a~~~g~~~~~~~~~~~~ll~~~~~~~~~vD~V~ 90 (398)
T 3dty_A 12 PIRWAMVGGGSQSQIGYI-HRCAALRDNTFVLVAGAFDIDPIRGSAFGEQLGVDSERCYADYLSMFEQEARRADGIQAVS 90 (398)
T ss_dssp CEEEEEEECCTTCSSHHH-HHHHHHGGGSEEEEEEECCSSHHHHHHHHHHTTCCGGGBCSSHHHHHHHHTTCTTCCSEEE
T ss_pred cceEEEEcCCccchhHHH-HHHHHhhCCCeEEEEEEeCCCHHHHHHHHHHhCCCcceeeCCHHHHHhcccccCCCCCEEE
Confidence 57999999999 9973 33221 112222 235788 577888888864 89999
Q ss_pred EeeCCccHHHHHHhhccccCCCCEEEEecC--CCcHHHHHhh
Q psy6714 182 LAVKPHIVPVALNDIKPVFNESNLLISVAG--GVPIKNMEQA 221 (303)
Q Consensus 182 LAVpP~~v~~VL~eI~~~L~~g~IVVSiaa--GV~ie~L~~~ 221 (303)
+|+|+..-.+++..... .|+-|+. -. ..+.+..+++
T Consensus 91 i~tp~~~H~~~~~~al~---aGkhVl~-EKPla~~~~ea~~l 128 (398)
T 3dty_A 91 IATPNGTHYSITKAALE---AGLHVVC-EKPLCFTVEQAENL 128 (398)
T ss_dssp EESCGGGHHHHHHHHHH---TTCEEEE-CSCSCSCHHHHHHH
T ss_pred ECCCcHHHHHHHHHHHH---CCCeEEE-eCCCcCCHHHHHHH
Confidence 99998776666655432 4555553 22 3445554443
No 197
>1pzg_A LDH, lactate dehydrogenase; apicomplexa, APAD, tetramer, rossmann fold, oxidoreductase; HET: CME A3D; 1.60A {Toxoplasma gondii} SCOP: c.2.1.5 d.162.1.1 PDB: 1pzf_A* 1pze_A* 1pzh_A* 3om9_A* 1sov_A 1sow_A* 3czm_A*
Probab=96.83 E-value=0.0026 Score=59.78 Aligned_cols=82 Identities=13% Similarity=0.206 Sum_probs=51.9
Q ss_pred CCcEEEEcCChhhHHHHHHHH--h---------hcHHH-----------HhhC----CCeEecChHHhhcCCCEEEEee-
Q psy6714 132 RSDKQIAGTTERGPGALIASL--N---------IVSKA-----------TGTM----GAKITFDNKEVTLNSEVIILAV- 184 (303)
Q Consensus 132 ~mkIgIIGlG~MG~~~La~al--~---------r~~e~-----------l~e~----Gv~v~~d~~eav~~ADIVILAV- 184 (303)
+|||+|||.|.||.+ ++..+ + ...++ +... .+..+.|..+++++||+||+++
T Consensus 9 ~~kI~VIGaG~vG~~-lA~~la~~g~~~V~L~D~~~~~~~~~~~~l~~~~~~~~~~~~i~~t~d~~ea~~~aDiVi~a~g 87 (331)
T 1pzg_A 9 RKKVAMIGSGMIGGT-MGYLCALRELADVVLYDVVKGMPEGKALDLSHVTSVVDTNVSVRAEYSYEAALTGADCVIVTAG 87 (331)
T ss_dssp CCEEEEECCSHHHHH-HHHHHHHHTCCEEEEECSSSSHHHHHHHHHHHHHHHTTCCCCEEEECSHHHHHTTCSEEEECCS
T ss_pred CCEEEEECCCHHHHH-HHHHHHhCCCCeEEEEECChhHHHHHHHHHHhhhhccCCCCEEEEeCCHHHHhCCCCEEEEccC
Confidence 589999999999995 54331 0 01110 1111 2334577777899999999999
Q ss_pred -C--Ccc-----------------HHHHHHhhccccCCCCEEEEecCCCcH
Q psy6714 185 -K--PHI-----------------VPVALNDIKPVFNESNLLISVAGGVPI 215 (303)
Q Consensus 185 -p--P~~-----------------v~~VL~eI~~~L~~g~IVVSiaaGV~i 215 (303)
| +.. +.+++++|..+. ++.+||-..+.+++
T Consensus 88 ~p~~~g~~~~~~~r~dl~~~n~~i~~~i~~~i~~~~-p~a~vi~~tNP~~~ 137 (331)
T 1pzg_A 88 LTKVPGKPDSEWSRNDLLPFNSKIIREIGQNIKKYC-PKTFIIVVTNPLDC 137 (331)
T ss_dssp CSSCTTCCGGGCCGGGGHHHHHHHHHHHHHHHHHHC-TTCEEEECCSSHHH
T ss_pred CCCCCCcccCCCCHHHHHHHHHHHHHHHHHHHHHHC-CCcEEEEEcCchHH
Confidence 3 222 667777777765 66666655555544
No 198
>3pqe_A L-LDH, L-lactate dehydrogenase; FBP, oxidoreductase; 2.20A {Bacillus subtilis} PDB: 3pqf_A* 3pqd_A*
Probab=96.81 E-value=0.0019 Score=60.91 Aligned_cols=100 Identities=13% Similarity=0.205 Sum_probs=57.8
Q ss_pred CCcEEEEcCChhhHHHHHHHH------------hhcHHH-------Hhh------CCCeEecChHHhhcCCCEEEEeeC-
Q psy6714 132 RSDKQIAGTTERGPGALIASL------------NIVSKA-------TGT------MGAKITFDNKEVTLNSEVIILAVK- 185 (303)
Q Consensus 132 ~mkIgIIGlG~MG~~~La~al------------~r~~e~-------l~e------~Gv~v~~d~~eav~~ADIVILAVp- 185 (303)
.|||+|||+|.||.+ ++..+ +...++ +.. .++.+..+..+++++||+||+++.
T Consensus 5 ~~kI~ViGaG~vG~~-~a~~l~~~~~~~~l~l~D~~~~k~~g~a~DL~~~~~~~~~~v~i~~~~~~a~~~aDvVvi~ag~ 83 (326)
T 3pqe_A 5 VNKVALIGAGFVGSS-YAFALINQGITDELVVIDVNKEKAMGDVMDLNHGKAFAPQPVKTSYGTYEDCKDADIVCICAGA 83 (326)
T ss_dssp CCEEEEECCSHHHHH-HHHHHHHHTCCSEEEEECSCHHHHHHHHHHHHHTGGGSSSCCEEEEECGGGGTTCSEEEECCSC
T ss_pred CCEEEEECCCHHHHH-HHHHHHhCCCCceEEEEecchHHHHHHHHHHHhccccccCCeEEEeCcHHHhCCCCEEEEeccc
Confidence 689999999999994 55432 111111 111 244555555678899999999983
Q ss_pred ---Ccc------------HHHHHHhhccccCCCCEEEEecCCCcHHH--HHhh--CCCCCceEEEecC
Q psy6714 186 ---PHI------------VPVALNDIKPVFNESNLLISVAGGVPIKN--MEQA--LPKNSRIIRAMPN 234 (303)
Q Consensus 186 ---P~~------------v~~VL~eI~~~L~~g~IVVSiaaGV~ie~--L~~~--l~~~~~VVr~mPn 234 (303)
|.. +.++++.+..+ .++.+|+-..+++++-. +.+. +|. .+++.++..
T Consensus 84 p~kpG~~R~dL~~~N~~Iv~~i~~~I~~~-~p~a~vlvvtNPvd~~t~~~~k~~g~p~-~rviG~gt~ 149 (326)
T 3pqe_A 84 NQKPGETRLELVEKNLKIFKGIVSEVMAS-GFDGIFLVATNPVDILTYATWKFSGLPK-ERVIGSGTT 149 (326)
T ss_dssp CCCTTCCHHHHHHHHHHHHHHHHHHHHHT-TCCSEEEECSSSHHHHHHHHHHHHCCCG-GGEEECTTH
T ss_pred CCCCCccHHHHHHHHHHHHHHHHHHHHHh-cCCeEEEEcCChHHHHHHHHHHhcCCCH-HHEEeeccc
Confidence 211 23444455554 35667777777776532 2232 332 356665333
No 199
>3llv_A Exopolyphosphatase-related protein; NAD(P)-binding, rossmann, PSI, M structural genomics; 1.70A {Archaeoglobus fulgidus}
Probab=96.79 E-value=0.0075 Score=48.40 Aligned_cols=89 Identities=10% Similarity=0.139 Sum_probs=48.7
Q ss_pred CCCcEEEEcCChhhHHHHHHHHh----------hcHH---HHhhCCCeEe-cCh--HHh-----hcCCCEEEEeeCCccH
Q psy6714 131 NRSDKQIAGTTERGPGALIASLN----------IVSK---ATGTMGAKIT-FDN--KEV-----TLNSEVIILAVKPHIV 189 (303)
Q Consensus 131 ~~mkIgIIGlG~MG~~~La~al~----------r~~e---~l~e~Gv~v~-~d~--~ea-----v~~ADIVILAVpP~~v 189 (303)
.|++|.|+|+|.+|. .++..+. +..+ .+.+.|+.+. .|. .+. ++++|+||++++....
T Consensus 5 ~~~~v~I~G~G~iG~-~la~~L~~~g~~V~~id~~~~~~~~~~~~~~~~~~gd~~~~~~l~~~~~~~~d~vi~~~~~~~~ 83 (141)
T 3llv_A 5 GRYEYIVIGSEAAGV-GLVRELTAAGKKVLAVDKSKEKIELLEDEGFDAVIADPTDESFYRSLDLEGVSAVLITGSDDEF 83 (141)
T ss_dssp -CCSEEEECCSHHHH-HHHHHHHHTTCCEEEEESCHHHHHHHHHTTCEEEECCTTCHHHHHHSCCTTCSEEEECCSCHHH
T ss_pred CCCEEEEECCCHHHH-HHHHHHHHCCCeEEEEECCHHHHHHHHHCCCcEEECCCCCHHHHHhCCcccCCEEEEecCCHHH
Confidence 467899999999999 5665542 1222 3445566532 221 222 3579999999986555
Q ss_pred HHHHHhhccccCCCCEEEEecCCCcHHHHHh
Q psy6714 190 PVALNDIKPVFNESNLLISVAGGVPIKNMEQ 220 (303)
Q Consensus 190 ~~VL~eI~~~L~~g~IVVSiaaGV~ie~L~~ 220 (303)
.-.+......+....+|+........+.|++
T Consensus 84 n~~~~~~a~~~~~~~iia~~~~~~~~~~l~~ 114 (141)
T 3llv_A 84 NLKILKALRSVSDVYAIVRVSSPKKKEEFEE 114 (141)
T ss_dssp HHHHHHHHHHHCCCCEEEEESCGGGHHHHHH
T ss_pred HHHHHHHHHHhCCceEEEEEcChhHHHHHHH
Confidence 4433333323334445444433333344443
No 200
>3ijp_A DHPR, dihydrodipicolinate reductase; ssgcid, SBRI, decode biostructures, niaid, amino-acid biosynthesis, cytoplasm; HET: NAP; 2.30A {Bartonella henselae}
Probab=96.77 E-value=0.0012 Score=61.61 Aligned_cols=88 Identities=18% Similarity=0.170 Sum_probs=59.2
Q ss_pred CCcEEEEc-CChhhHHHHHHHHhhcH------------H--------HH---hhCCCeEecChHHhhcCCCEEEEeeCCc
Q psy6714 132 RSDKQIAG-TTERGPGALIASLNIVS------------K--------AT---GTMGAKITFDNKEVTLNSEVIILAVKPH 187 (303)
Q Consensus 132 ~mkIgIIG-lG~MG~~~La~al~r~~------------e--------~l---~e~Gv~v~~d~~eav~~ADIVILAVpP~ 187 (303)
++||+|+| +|.||. .++....... . .+ ...|+.++.|..+++.++|+||-++.|.
T Consensus 21 ~irV~V~Ga~GrMGr-~i~~~v~~~~~~eLvg~vd~~~~~~~G~d~gel~G~~~~gv~v~~dl~~ll~~aDVvIDFT~p~ 99 (288)
T 3ijp_A 21 SMRLTVVGANGRMGR-ELITAIQRRKDVELCAVLVRKGSSFVDKDASILIGSDFLGVRITDDPESAFSNTEGILDFSQPQ 99 (288)
T ss_dssp CEEEEESSTTSHHHH-HHHHHHHTCSSEEEEEEBCCTTCTTTTSBGGGGTTCSCCSCBCBSCHHHHTTSCSEEEECSCHH
T ss_pred CeEEEEECCCCHHHH-HHHHHHHhCCCCEEEEEEecCCccccccchHHhhccCcCCceeeCCHHHHhcCCCEEEEcCCHH
Confidence 57999999 999999 6665532211 0 01 1346777788889899999999999988
Q ss_pred cHHHHHHhhccccCCCCEEEEecCCCcHHH---HHhhCC
Q psy6714 188 IVPVALNDIKPVFNESNLLISVAGGVPIKN---MEQALP 223 (303)
Q Consensus 188 ~v~~VL~eI~~~L~~g~IVVSiaaGV~ie~---L~~~l~ 223 (303)
.+.+.+..... .+.-+|....|.+.+. |++.+.
T Consensus 100 a~~~~~~~~l~---~Gv~vViGTTG~~~e~~~~L~~aa~ 135 (288)
T 3ijp_A 100 ASVLYANYAAQ---KSLIHIIGTTGFSKTEEAQIADFAK 135 (288)
T ss_dssp HHHHHHHHHHH---HTCEEEECCCCCCHHHHHHHHHHHT
T ss_pred HHHHHHHHHHH---cCCCEEEECCCCCHHHHHHHHHHhC
Confidence 87777665433 3444555556777643 444443
No 201
>3d0o_A L-LDH 1, L-lactate dehydrogenase 1; cytoplasm, glycolysis, NAD, oxidoreductase, phosphoprotein; 1.80A {Staphylococcus aureus} PDB: 3d4p_A* 3h3j_A*
Probab=96.75 E-value=0.0026 Score=59.38 Aligned_cols=101 Identities=12% Similarity=0.192 Sum_probs=59.0
Q ss_pred CCcEEEEcCChhhHHHHHHHH------------hhcHHHH-------h----h--CCCeEecChHHhhcCCCEEEEeeC-
Q psy6714 132 RSDKQIAGTTERGPGALIASL------------NIVSKAT-------G----T--MGAKITFDNKEVTLNSEVIILAVK- 185 (303)
Q Consensus 132 ~mkIgIIGlG~MG~~~La~al------------~r~~e~l-------~----e--~Gv~v~~d~~eav~~ADIVILAVp- 185 (303)
+|||+|||+|.+|.+ ++..+ +...+++ . . ..+.+..+..+++++||+||+++.
T Consensus 6 ~~KI~IIGaG~vG~~-la~~l~~~~~~~ei~L~Di~~~~~~g~~~dl~~~~~~~~~~~~v~~~~~~a~~~aDvVvi~ag~ 84 (317)
T 3d0o_A 6 GNKVVLIGNGAVGSS-YAFSLVNQSIVDELVIIDLDTEKVRGDVMDLKHATPYSPTTVRVKAGEYSDCHDADLVVICAGA 84 (317)
T ss_dssp CCEEEEECCSHHHHH-HHHHHHHHCSCSEEEEECSCHHHHHHHHHHHHHHGGGSSSCCEEEECCGGGGTTCSEEEECCCC
T ss_pred CCEEEEECCCHHHHH-HHHHHHhCCCCCEEEEEeCChhHhhhhhhhHHhhhhhcCCCeEEEeCCHHHhCCCCEEEECCCC
Confidence 479999999999995 44321 1111111 1 1 234455566778999999999984
Q ss_pred C---------------ccHHHHHHhhccccCCCCEEEEecCCCcHH--HHHhh--CCCCCceEEEecCc
Q psy6714 186 P---------------HIVPVALNDIKPVFNESNLLISVAGGVPIK--NMEQA--LPKNSRIIRAMPNT 235 (303)
Q Consensus 186 P---------------~~v~~VL~eI~~~L~~g~IVVSiaaGV~ie--~L~~~--l~~~~~VVr~mPn~ 235 (303)
| ..+.++.+.+..+ .++.+||-..+++..- .+.+. ++. .+++.++.++
T Consensus 85 ~~~~g~~r~dl~~~n~~i~~~i~~~i~~~-~p~a~viv~tNPv~~~t~~~~k~~~~p~-~rviG~gt~l 151 (317)
T 3d0o_A 85 AQKPGETRLDLVSKNLKIFKSIVGEVMAS-KFDGIFLVATNPVDILAYATWKFSGLPK-ERVIGSGTIL 151 (317)
T ss_dssp CCCTTCCHHHHHHHHHHHHHHHHHHHHHT-TCCSEEEECSSSHHHHHHHHHHHHCCCG-GGEEECTTHH
T ss_pred CCCCCCcHHHHHHHHHHHHHHHHHHHHHh-CCCcEEEEecCcHHHHHHHHHHHhCCCH-HHEEecCccc
Confidence 2 1244555566665 4566666566666552 33344 442 3666664443
No 202
>2czc_A Glyceraldehyde-3-phosphate dehydrogenase; glycolysis, NAD, oxidoreductase, structural genomics; HET: NAD; 2.00A {Pyrococcus horikoshii} SCOP: c.2.1.3 d.81.1.1
Probab=96.73 E-value=0.0026 Score=59.85 Aligned_cols=62 Identities=10% Similarity=0.080 Sum_probs=40.8
Q ss_pred CCcEEEEcCChhhHHHHHHHHhhc------------H----HHHhhCCC------------------eEecChHHhhcCC
Q psy6714 132 RSDKQIAGTTERGPGALIASLNIV------------S----KATGTMGA------------------KITFDNKEVTLNS 177 (303)
Q Consensus 132 ~mkIgIIGlG~MG~~~La~al~r~------------~----e~l~e~Gv------------------~v~~d~~eav~~A 177 (303)
|+||||||+|.||. .++..+... . ..++..|+ .+..+..+++.++
T Consensus 2 ~irVgIiG~G~iG~-~~~r~l~~~~~~elvav~d~~~~~~~~~~~~~g~~~~~~~~~~v~~~~~~~~~v~~d~~~l~~~v 80 (334)
T 2czc_A 2 KVKVGVNGYGTIGK-RVAYAVTKQDDMELIGITKTKPDFEAYRAKELGIPVYAASEEFIPRFEKEGFEVAGTLNDLLEKV 80 (334)
T ss_dssp CEEEEEECCSHHHH-HHHHHHHTCTTEEEEEEEESSCSHHHHHHHHTTCCEEESSGGGHHHHHHHTCCCSCBHHHHHTTC
T ss_pred CcEEEEEeEhHHHH-HHHHHHhcCCCCEEEEEEcCCHHHHHHHHHhcCccccccccccceeccCCceEEcCcHHHhccCC
Confidence 46999999999999 566553221 1 11223443 2335677777899
Q ss_pred CEEEEeeCCccHHHHHH
Q psy6714 178 EVIILAVKPHIVPVALN 194 (303)
Q Consensus 178 DIVILAVpP~~v~~VL~ 194 (303)
|+||+|+|...-.+...
T Consensus 81 DvV~~aTp~~~h~~~a~ 97 (334)
T 2czc_A 81 DIIVDATPGGIGAKNKP 97 (334)
T ss_dssp SEEEECCSTTHHHHHHH
T ss_pred CEEEECCCccccHHHHH
Confidence 99999999776444444
No 203
>1oju_A MDH, malate dehydrogenase; hyperthermophilic, oxidoreductase; HET: ENA; 2.79A {Archaeoglobus fulgidus} PDB: 1ojs_A* 2x0i_A* 2x0j_A*
Probab=96.72 E-value=0.002 Score=59.92 Aligned_cols=80 Identities=15% Similarity=0.174 Sum_probs=48.5
Q ss_pred CcEEEEcCChhhHHHHHHHH------------hhcHHHH-------h---h-C--CCe--EecChHHhhcCCCEEEEeeC
Q psy6714 133 SDKQIAGTTERGPGALIASL------------NIVSKAT-------G---T-M--GAK--ITFDNKEVTLNSEVIILAVK 185 (303)
Q Consensus 133 mkIgIIGlG~MG~~~La~al------------~r~~e~l-------~---e-~--Gv~--v~~d~~eav~~ADIVILAVp 185 (303)
|||+|||.|.||.+ ++..+ +...+++ . . + ... .+.| .+++++||+||++..
T Consensus 1 MkI~ViGaG~vG~~-la~~l~~~~~~~~v~L~D~~~~~~~g~~~dl~~~~~~~~~~~~i~~t~d-~~a~~~aDiVViaag 78 (294)
T 1oju_A 1 MKLGFVGAGRVGST-SAFTCLLNLDVDEIALVDIAEDLAVGEAMDLAHAAAGIDKYPKIVGGAD-YSLLKGSEIIVVTAG 78 (294)
T ss_dssp CEEEEECCSHHHHH-HHHHHHHHSCCSEEEEECSSHHHHHHHHHHHHHHHHTTTCCCEEEEESC-GGGGTTCSEEEECCC
T ss_pred CEEEEECCCHHHHH-HHHHHHhCCCCCeEEEEECChHHHHHHHHHHHhhhhhcCCCCEEEEeCC-HHHhCCCCEEEECCC
Confidence 79999999999994 54331 1111111 1 1 1 223 3345 778999999999983
Q ss_pred ----Cc------------cHHHHHHhhccccCCCCEEEEecCCCcH
Q psy6714 186 ----PH------------IVPVALNDIKPVFNESNLLISVAGGVPI 215 (303)
Q Consensus 186 ----P~------------~v~~VL~eI~~~L~~g~IVVSiaaGV~i 215 (303)
|. .+.++.+.+..+ .++.+||-..+++++
T Consensus 79 ~~~kpG~~R~dl~~~N~~i~~~i~~~i~~~-~p~a~iivvsNPvd~ 123 (294)
T 1oju_A 79 LARKPGMTRLDLAHKNAGIIKDIAKKIVEN-APESKILVVTNPMDV 123 (294)
T ss_dssp CCCCSSCCHHHHHHHHHHHHHHHHHHHHTT-STTCEEEECSSSHHH
T ss_pred CCCCCCCcHHHHHHHHHHHHHHHHHHHHhh-CCCeEEEEeCCcchH
Confidence 21 123444556654 466777767777765
No 204
>2nu8_A Succinyl-COA ligase [ADP-forming] subunit alpha; citric acid cycle, heterotetramer, ligase, ATP-grAsp fold, R fold; HET: COA; 2.15A {Escherichia coli} SCOP: c.2.1.8 c.23.4.1 PDB: 2nu9_A* 2nu7_A* 2nua_A* 2nu6_A* 2scu_A* 1jll_A* 1scu_A* 1jkj_A* 1cqj_A* 1cqi_A*
Probab=96.71 E-value=0.0046 Score=57.12 Aligned_cols=83 Identities=11% Similarity=0.144 Sum_probs=58.1
Q ss_pred CCcEEEEcC-ChhhHHHHHHHHhhc---------HHHH--hhCCCeEecChHHhhc--CCCEEEEeeCCccHHHHHHhhc
Q psy6714 132 RSDKQIAGT-TERGPGALIASLNIV---------SKAT--GTMGAKITFDNKEVTL--NSEVIILAVKPHIVPVALNDIK 197 (303)
Q Consensus 132 ~mkIgIIGl-G~MG~~~La~al~r~---------~e~l--~e~Gv~v~~d~~eav~--~ADIVILAVpP~~v~~VL~eI~ 197 (303)
.+||+|+|+ |.||. ..+..+... ..+. ..+|+.+..+..++.+ +.|+++++||+....+++.+..
T Consensus 7 ~~rVaViG~sG~~G~-~~~~~l~~~g~~~V~~V~p~~~g~~~~G~~vy~sl~el~~~~~~D~viI~tP~~~~~~~~~ea~ 85 (288)
T 2nu8_A 7 NTKVICQGFTGSQGT-FHSEQAIAYGTKMVGGVTPGKGGTTHLGLPVFNTVREAVAATGATASVIYVPAPFCKDSILEAI 85 (288)
T ss_dssp TCEEEEETTTSHHHH-HHHHHHHHHTCEEEEEECTTCTTCEETTEEEESSHHHHHHHHCCCEEEECCCGGGHHHHHHHHH
T ss_pred CCEEEEECCCChHHH-HHHHHHHHCCCeEEEEeCCCcccceeCCeeccCCHHHHhhcCCCCEEEEecCHHHHHHHHHHHH
Confidence 578999998 99998 455443221 0111 1347777788888887 8999999999999999998865
Q ss_pred cccCCCCEEEEecCCCcHHH
Q psy6714 198 PVFNESNLLISVAGGVPIKN 217 (303)
Q Consensus 198 ~~L~~g~IVVSiaaGV~ie~ 217 (303)
.. .-+.+|-+..|++.+.
T Consensus 86 ~~--Gi~~iVi~t~G~~~~~ 103 (288)
T 2nu8_A 86 DA--GIKLIITITEGIPTLD 103 (288)
T ss_dssp HT--TCSEEEECCCCCCHHH
T ss_pred HC--CCCEEEEECCCCCHHH
Confidence 42 1234444667887753
No 205
>3hdj_A Probable ornithine cyclodeaminase; APC62486, bordetella pertussis TOH structural genomics, PSI-2, protein structure initiative; 1.70A {Bordetella pertussis}
Probab=96.69 E-value=0.0017 Score=60.76 Aligned_cols=76 Identities=13% Similarity=0.235 Sum_probs=48.5
Q ss_pred CCcEEEEcCChhhHHHHHHHHh------------hc-HHHH----h-hCCC--eEecChHHhhcCCCEEEEeeCCccHHH
Q psy6714 132 RSDKQIAGTTERGPGALIASLN------------IV-SKAT----G-TMGA--KITFDNKEVTLNSEVIILAVKPHIVPV 191 (303)
Q Consensus 132 ~mkIgIIGlG~MG~~~La~al~------------r~-~e~l----~-e~Gv--~v~~d~~eav~~ADIVILAVpP~~v~~ 191 (303)
..+|+|||+|.||.. .+..+. ++ .+.+ . +.|+ ... +.++++++|||||+|++... .
T Consensus 121 ~~~v~iIGaG~~a~~-~~~al~~~~~~~~V~v~~r~~a~~la~~l~~~~g~~~~~~-~~~eav~~aDIVi~aT~s~~--p 196 (313)
T 3hdj_A 121 SSVLGLFGAGTQGAE-HAAQLSARFALEAILVHDPYASPEILERIGRRCGVPARMA-APADIAAQADIVVTATRSTT--P 196 (313)
T ss_dssp CCEEEEECCSHHHHH-HHHHHHHHSCCCEEEEECTTCCHHHHHHHHHHHTSCEEEC-CHHHHHHHCSEEEECCCCSS--C
T ss_pred CcEEEEECccHHHHH-HHHHHHHhCCCcEEEEECCcHHHHHHHHHHHhcCCeEEEe-CHHHHHhhCCEEEEccCCCC--c
Confidence 467999999999984 333321 11 1122 2 2466 345 88899999999999998642 3
Q ss_pred HHHhhccccCCCCEEEEecCCCc
Q psy6714 192 ALNDIKPVFNESNLLISVAGGVP 214 (303)
Q Consensus 192 VL~eI~~~L~~g~IVVSiaaGV~ 214 (303)
++. .+.++++++|+ .++..+
T Consensus 197 vl~--~~~l~~G~~V~-~vGs~~ 216 (313)
T 3hdj_A 197 LFA--GQALRAGAFVG-AIGSSL 216 (313)
T ss_dssp SSC--GGGCCTTCEEE-ECCCSS
T ss_pred ccC--HHHcCCCcEEE-ECCCCC
Confidence 332 34577888765 444443
No 206
>1ez4_A Lactate dehydrogenase; rossmann fold, oxidoreductase; HET: NAD; 2.30A {Lactobacillus pentosus} SCOP: c.2.1.5 d.162.1.1
Probab=96.67 E-value=0.0028 Score=59.32 Aligned_cols=101 Identities=15% Similarity=0.242 Sum_probs=59.5
Q ss_pred CCcEEEEcCChhhHHHHHHHH------------hhcHHHH-------hh-----CCCeEecChHHhhcCCCEEEEeeC--
Q psy6714 132 RSDKQIAGTTERGPGALIASL------------NIVSKAT-------GT-----MGAKITFDNKEVTLNSEVIILAVK-- 185 (303)
Q Consensus 132 ~mkIgIIGlG~MG~~~La~al------------~r~~e~l-------~e-----~Gv~v~~d~~eav~~ADIVILAVp-- 185 (303)
+|||+|||+|.+|.+ ++..+ +...+++ .. ..+++..+..+++++||+||++..
T Consensus 5 ~~KI~IiGaG~vG~~-~a~~l~~~~~~~el~L~Di~~~~~~g~~~dl~~~~~~~~~~~v~~~~~~a~~~aDvVii~ag~~ 83 (318)
T 1ez4_A 5 HQKVVLVGDGAVGSS-YAFAMAQQGIAEEFVIVDVVKDRTKGDALDLEDAQAFTAPKKIYSGEYSDCKDADLVVITAGAP 83 (318)
T ss_dssp BCEEEEECCSHHHHH-HHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHGGGGGSCCCEEEECCGGGGTTCSEEEECCCC-
T ss_pred CCEEEEECCCHHHHH-HHHHHHcCCCCCEEEEEeCCchHHHHHHHHHHHHHHhcCCeEEEECCHHHhCCCCEEEECCCCC
Confidence 489999999999994 44331 1111111 11 234455566778999999999984
Q ss_pred --C------------ccHHHHHHhhccccCCCCEEEEecCCCcHH--HHHhh--CCCCCceEEEecCc
Q psy6714 186 --P------------HIVPVALNDIKPVFNESNLLISVAGGVPIK--NMEQA--LPKNSRIIRAMPNT 235 (303)
Q Consensus 186 --P------------~~v~~VL~eI~~~L~~g~IVVSiaaGV~ie--~L~~~--l~~~~~VVr~mPn~ 235 (303)
| ..+.++++.+..+ .++.+||-..+++..- .+.+. ++. .+++.++.++
T Consensus 84 ~~~g~~R~dl~~~n~~i~~~i~~~i~~~-~p~a~iiv~tNPv~~~t~~~~k~s~~p~-~rviG~gt~L 149 (318)
T 1ez4_A 84 QKPGESRLDLVNKNLNILSSIVKPVVDS-GFDGIFLVAANPVDILTYATWKFSGFPK-ERVIGSGTSL 149 (318)
T ss_dssp ---------CHHHHHHHHHHHHHHHHHT-TCCSEEEECSSSHHHHHHHHHHHHCCCG-GGEEECTTHH
T ss_pred CCCCCCHHHHHHHHHHHHHHHHHHHHHh-CCCeEEEEeCCcHHHHHHHHHHHcCCCH-HHEEeccccc
Confidence 2 2244555556655 3566666677777652 33343 442 3666664443
No 207
>3btv_A Galactose/lactose metabolism regulatory protein GAL80; eukaryotic transcription repressor, acetylation, carbohydrate metabolism; 2.10A {Saccharomyces cerevisiae} PDB: 3bts_A 3v2u_A* 3btu_A
Probab=96.66 E-value=0.0067 Score=58.78 Aligned_cols=64 Identities=5% Similarity=-0.069 Sum_probs=42.6
Q ss_pred CCcEEEEcC----ChhhHHHHHHHHhhc-------------HHH----HhhCCCe---EecChHHhhc--CCCEEEEeeC
Q psy6714 132 RSDKQIAGT----TERGPGALIASLNIV-------------SKA----TGTMGAK---ITFDNKEVTL--NSEVIILAVK 185 (303)
Q Consensus 132 ~mkIgIIGl----G~MG~~~La~al~r~-------------~e~----l~e~Gv~---v~~d~~eav~--~ADIVILAVp 185 (303)
++||||||+ |.||.. .+..+... .++ .+++|+. +..|..++++ +.|+|++|+|
T Consensus 20 ~irvgiIG~g~~gG~~g~~-~~~~l~~~~~~~~lvav~d~~~~~~~~~a~~~g~~~~~~~~~~~~ll~~~~vD~V~i~tp 98 (438)
T 3btv_A 20 PIRVGFVGLNAAKGWAIKT-HYPAILQLSSQFQITALYSPKIETSIATIQRLKLSNATAFPTLESFASSSTIDMIVIAIQ 98 (438)
T ss_dssp CEEEEEESCCTTSSSTTTT-HHHHHHHTTTTEEEEEEECSSHHHHHHHHHHTTCTTCEEESSHHHHHHCSSCSEEEECSC
T ss_pred CCEEEEEcccCCCChHHHH-HHHHHHhcCCCeEEEEEEeCCHHHHHHHHHHcCCCcceeeCCHHHHhcCCCCCEEEEeCC
Confidence 478999999 888872 33322211 122 2345664 7788889886 6899999999
Q ss_pred CccHHHHHHhh
Q psy6714 186 PHIVPVALNDI 196 (303)
Q Consensus 186 P~~v~~VL~eI 196 (303)
+..-.+++...
T Consensus 99 ~~~H~~~~~~a 109 (438)
T 3btv_A 99 VASHYEVVMPL 109 (438)
T ss_dssp HHHHHHHHHHH
T ss_pred cHHHHHHHHHH
Confidence 77665555443
No 208
>1y6j_A L-lactate dehydrogenase; southeast collaboratory for structural genomics, secsg, protein struc initiative, PSI, oxidoreductase; 3.01A {Clostridium thermocellum} SCOP: c.2.1.5 d.162.1.1
Probab=96.63 E-value=0.0033 Score=58.75 Aligned_cols=102 Identities=14% Similarity=0.210 Sum_probs=57.0
Q ss_pred CCcEEEEcCChhhHHHHHHHH------------hhcHHH-------Hhh---C--CCeEecChHHhhcCCCEEEEeeC-C
Q psy6714 132 RSDKQIAGTTERGPGALIASL------------NIVSKA-------TGT---M--GAKITFDNKEVTLNSEVIILAVK-P 186 (303)
Q Consensus 132 ~mkIgIIGlG~MG~~~La~al------------~r~~e~-------l~e---~--Gv~v~~d~~eav~~ADIVILAVp-P 186 (303)
+|||+|||+|.+|.+ ++..+ +...++ +.. + .+++..+..+++++||+||++++ |
T Consensus 7 ~~KI~IiGaG~vG~~-~a~~l~~~~~~~ev~L~Di~~~~~~g~~~dl~~~~~~~~~~~i~~~~~~a~~~aDvVii~~g~p 85 (318)
T 1y6j_A 7 RSKVAIIGAGFVGAS-AAFTMALRQTANELVLIDVFKEKAIGEAMDINHGLPFMGQMSLYAGDYSDVKDCDVIVVTAGAN 85 (318)
T ss_dssp CCCEEEECCSHHHHH-HHHHHHHTTCSSEEEEECCC---CCHHHHHHTTSCCCTTCEEEC--CGGGGTTCSEEEECCCC-
T ss_pred CCEEEEECCCHHHHH-HHHHHHhCCCCCEEEEEeCChHHHHHHHHHHHHhHHhcCCeEEEECCHHHhCCCCEEEEcCCCC
Confidence 589999999999995 44331 111111 111 1 22333344667999999999995 3
Q ss_pred cc---------------HHHHHHhhccccCCCCEEEEecCCCcHH--HHHhh--CCCCCceEEEecCcH
Q psy6714 187 HI---------------VPVALNDIKPVFNESNLLISVAGGVPIK--NMEQA--LPKNSRIIRAMPNTP 236 (303)
Q Consensus 187 ~~---------------v~~VL~eI~~~L~~g~IVVSiaaGV~ie--~L~~~--l~~~~~VVr~mPn~p 236 (303)
.. +.++++.+.++- ++.+||-..+++..- .+.+. ++. .+++.++.+++
T Consensus 86 ~k~g~~r~dl~~~n~~i~~~i~~~i~~~~-p~a~viv~tNPv~~~~~~~~k~s~~p~-~rviG~gt~Ld 152 (318)
T 1y6j_A 86 RKPGETRLDLAKKNVMIAKEVTQNIMKYY-NHGVILVVSNPVDIITYMIQKWSGLPV-GKVIGSGTVLD 152 (318)
T ss_dssp -----CHHHHHHHHHHHHHHHHHHHHHHC-CSCEEEECSSSHHHHHHHHHHHHTCCT-TTEEECTTHHH
T ss_pred CCCCcCHHHHHHhhHHHHHHHHHHHHHhC-CCcEEEEecCcHHHHHHHHHHHcCCCH-HHEeccCCchH
Confidence 21 466667777653 566666566666542 23333 443 46766644433
No 209
>1t2d_A LDH-P, L-lactate dehydrogenase; ternary complex, oxidoreductase; HET: NAD; 1.10A {Plasmodium falciparum} SCOP: c.2.1.5 d.162.1.1 PDB: 1t25_A* 1t26_A* 1t2c_A* 1t24_A* 2x8l_A 2ydn_A* 2a94_A* 1u4s_A* 1u5a_A* 1u5c_A* 1u4o_A* 1t2e_A* 1xiv_A* 1ceq_A 1ldg_A* 1cet_A* 1oc4_A* 2a92_A* 2aa3_A*
Probab=96.58 E-value=0.0046 Score=57.93 Aligned_cols=81 Identities=16% Similarity=0.179 Sum_probs=49.5
Q ss_pred CCcEEEEcCChhhHHHHHHHH-----------hhcHHH-------Hh------hCC--CeEecChHHhhcCCCEEEEee-
Q psy6714 132 RSDKQIAGTTERGPGALIASL-----------NIVSKA-------TG------TMG--AKITFDNKEVTLNSEVIILAV- 184 (303)
Q Consensus 132 ~mkIgIIGlG~MG~~~La~al-----------~r~~e~-------l~------e~G--v~v~~d~~eav~~ADIVILAV- 184 (303)
+|||+|||+|.||.+ ++..+ +...++ +. ... +..+.|. +++++||+||+++
T Consensus 4 ~~kI~VIGaG~vG~~-ia~~la~~g~~~v~L~Di~~~~l~~~~~~l~~~~~~~~~~~~i~~t~d~-~al~~aD~Vi~a~g 81 (322)
T 1t2d_A 4 KAKIVLVGSGMIGGV-MATLIVQKNLGDVVLFDIVKNMPHGKALDTSHTNVMAYSNCKVSGSNTY-DDLAGADVVIVTAG 81 (322)
T ss_dssp CCEEEEECCSHHHHH-HHHHHHHTTCCEEEEECSSSSHHHHHHHHHHTHHHHHTCCCCEEEECCG-GGGTTCSEEEECCS
T ss_pred CCEEEEECCCHHHHH-HHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhhhhhcCCCcEEEECCCH-HHhCCCCEEEEeCC
Confidence 579999999999995 44331 111111 11 112 2334566 7899999999998
Q ss_pred -CC--c-----------------cHHHHHHhhccccCCCCEEEEecCCCcH
Q psy6714 185 -KP--H-----------------IVPVALNDIKPVFNESNLLISVAGGVPI 215 (303)
Q Consensus 185 -pP--~-----------------~v~~VL~eI~~~L~~g~IVVSiaaGV~i 215 (303)
|. . .+.+++++|..+. ++.+||-..+.+++
T Consensus 82 ~p~k~g~~~qe~~r~dl~~~n~~i~~~i~~~i~~~~-p~a~iiv~tNP~~~ 131 (322)
T 1t2d_A 82 FTKAPGKSDKEWNRDDLLPLNNKIMIEIGGHIKKNC-PNAFIIVVTNPVDV 131 (322)
T ss_dssp CSSCTTCCSTTCCGGGGHHHHHHHHHHHHHHHHHHC-TTSEEEECSSSHHH
T ss_pred CCCCCCCCcccccHHHHHHHHHHHHHHHHHHHHHHC-CCeEEEEecCChHH
Confidence 31 1 3566667777665 66666545565544
No 210
>1ur5_A Malate dehydrogenase; oxidoreductase, tricarboxylic acid cycle; HET: NAD; 1.75A {Chloroflexus aurantiacus} SCOP: c.2.1.5 d.162.1.1 PDB: 1uxg_A* 1guy_A* 1uxk_A* 1uxh_A* 1uxj_A* 1uxi_A*
Probab=96.57 E-value=0.0047 Score=57.35 Aligned_cols=82 Identities=22% Similarity=0.229 Sum_probs=47.3
Q ss_pred CCCcEEEEcCChhhHHHHHHHH-h----------hcHHH-------Hhh------CCC--eEecChHHhhcCCCEEEEee
Q psy6714 131 NRSDKQIAGTTERGPGALIASL-N----------IVSKA-------TGT------MGA--KITFDNKEVTLNSEVIILAV 184 (303)
Q Consensus 131 ~~mkIgIIGlG~MG~~~La~al-~----------r~~e~-------l~e------~Gv--~v~~d~~eav~~ADIVILAV 184 (303)
|+|||+|||+|.||.+ ++..+ . ...++ +.+ ... ..+.+. +++++||+||+++
T Consensus 1 M~~kI~VIGaG~vG~~-~a~~la~~g~~~v~L~Di~~~~~~g~~~dl~~~~~~~~~~~~i~~t~d~-~a~~~aD~Vi~a~ 78 (309)
T 1ur5_A 1 MRKKISIIGAGFVGST-TAHWLAAKELGDIVLLDIVEGVPQGKALDLYEASPIEGFDVRVTGTNNY-ADTANSDVIVVTS 78 (309)
T ss_dssp -CCEEEEECCSHHHHH-HHHHHHHTTCSEEEEECSSSSHHHHHHHHHHTTHHHHTCCCCEEEESCG-GGGTTCSEEEECC
T ss_pred CCCEEEEECCCHHHHH-HHHHHHHCCCCeEEEEeCCccHHHHHHHhHHHhHhhcCCCeEEEECCCH-HHHCCCCEEEEcC
Confidence 3579999999999995 44331 1 11111 111 122 233565 7789999999998
Q ss_pred C-C---------------ccHHHHHHhhccccCCCCEEEEecCCCcH
Q psy6714 185 K-P---------------HIVPVALNDIKPVFNESNLLISVAGGVPI 215 (303)
Q Consensus 185 p-P---------------~~v~~VL~eI~~~L~~g~IVVSiaaGV~i 215 (303)
. | ..+.++++.+..+. ++.+||-..++++.
T Consensus 79 g~p~~~g~~r~dl~~~n~~i~~~i~~~i~~~~-p~a~vi~~tNPv~~ 124 (309)
T 1ur5_A 79 GAPRKPGMSREDLIKVNADITRACISQAAPLS-PNAVIIMVNNPLDA 124 (309)
T ss_dssp CC--------CHHHHHHHHHHHHHHHHHGGGC-TTCEEEECCSSHHH
T ss_pred CCCCCCCCCHHHHHHHHHHHHHHHHHHHHhhC-CCeEEEEcCCchHH
Confidence 3 2 12235556666654 66666555665554
No 211
>4ew6_A D-galactose-1-dehydrogenase protein; nysgrc, PSI-biology, structural genomics, NEW YORK structura genomics research consortium, two domain; 2.30A {Rhizobium etli}
Probab=96.56 E-value=0.0023 Score=59.72 Aligned_cols=86 Identities=9% Similarity=0.038 Sum_probs=53.8
Q ss_pred CCcEEEEcCChhhHHHHHHHHhhcHH---------HHhhCCCeEecChHHhhcC---CCEEEEeeCCccHHHHHHhhccc
Q psy6714 132 RSDKQIAGTTERGPGALIASLNIVSK---------ATGTMGAKITFDNKEVTLN---SEVIILAVKPHIVPVALNDIKPV 199 (303)
Q Consensus 132 ~mkIgIIGlG~MG~~~La~al~r~~e---------~l~e~Gv~v~~d~~eav~~---ADIVILAVpP~~v~~VL~eI~~~ 199 (303)
++||||||+|.||....+..+..... .....|+....|.++++++ .|+|++|+|+..-.+++....
T Consensus 25 ~~rvgiiG~G~ig~~~~~~~l~~~~~~~lvav~d~~~~~~g~~~~~~~~~ll~~~~~vD~V~i~tp~~~H~~~~~~al-- 102 (330)
T 4ew6_A 25 PINLAIVGVGKIVRDQHLPSIAKNANFKLVATASRHGTVEGVNSYTTIEAMLDAEPSIDAVSLCMPPQYRYEAAYKAL-- 102 (330)
T ss_dssp CEEEEEECCSHHHHHTHHHHHHHCTTEEEEEEECSSCCCTTSEEESSHHHHHHHCTTCCEEEECSCHHHHHHHHHHHH--
T ss_pred CceEEEEecCHHHHHHHHHHHHhCCCeEEEEEEeCChhhcCCCccCCHHHHHhCCCCCCEEEEeCCcHHHHHHHHHHH--
Confidence 46899999999997223333332211 1124578888888888764 899999999877766665543
Q ss_pred cCCCCEEEEec-CCCcHHHHHh
Q psy6714 200 FNESNLLISVA-GGVPIKNMEQ 220 (303)
Q Consensus 200 L~~g~IVVSia-aGV~ie~L~~ 220 (303)
..|+-|+.-. -+.+.+..++
T Consensus 103 -~aGkhVl~EKP~a~~~~e~~~ 123 (330)
T 4ew6_A 103 -VAGKHVFLEKPPGATLSEVAD 123 (330)
T ss_dssp -HTTCEEEECSSSCSSHHHHHH
T ss_pred -HcCCcEEEeCCCCCCHHHHHH
Confidence 2556555221 1345544443
No 212
>2hmt_A YUAA protein; RCK, KTN, KTR, KTRA, ktrab, membrane protein, ION transporter, symporter, transport protein; HET: NAI; 2.20A {Bacillus subtilis} SCOP: c.2.1.9 PDB: 2hms_A* 2hmu_A* 2hmv_A* 2hmw_A* 1lsu_A*
Probab=96.55 E-value=0.0051 Score=48.62 Aligned_cols=81 Identities=11% Similarity=0.130 Sum_probs=43.1
Q ss_pred CCCcEEEEcCChhhHHHHHHHHhh----------cHHH---HhhCCCeEe-cC---hH---Hh-hcCCCEEEEeeCCc-c
Q psy6714 131 NRSDKQIAGTTERGPGALIASLNI----------VSKA---TGTMGAKIT-FD---NK---EV-TLNSEVIILAVKPH-I 188 (303)
Q Consensus 131 ~~mkIgIIGlG~MG~~~La~al~r----------~~e~---l~e~Gv~v~-~d---~~---ea-v~~ADIVILAVpP~-~ 188 (303)
.+++|.|+|.|.||. .++..+.. ..++ +.+.|.... .+ .. ++ ++++|+||+|++.. .
T Consensus 5 ~~~~v~I~G~G~iG~-~~a~~l~~~g~~v~~~d~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~~~~d~vi~~~~~~~~ 83 (144)
T 2hmt_A 5 KNKQFAVIGLGRFGG-SIVKELHRMGHEVLAVDINEEKVNAYASYATHAVIANATEENELLSLGIRNFEYVIVAIGANIQ 83 (144)
T ss_dssp -CCSEEEECCSHHHH-HHHHHHHHTTCCCEEEESCHHHHHTTTTTCSEEEECCTTCHHHHHTTTGGGCSEEEECCCSCHH
T ss_pred cCCcEEEECCCHHHH-HHHHHHHHCCCEEEEEeCCHHHHHHHHHhCCEEEEeCCCCHHHHHhcCCCCCCEEEECCCCchH
Confidence 356799999999999 56655321 2222 233455432 22 21 22 56799999999864 4
Q ss_pred HHHHHHhhccccCCCCEEEEecCCC
Q psy6714 189 VPVALNDIKPVFNESNLLISVAGGV 213 (303)
Q Consensus 189 v~~VL~eI~~~L~~g~IVVSiaaGV 213 (303)
....+......+....+ |..+.+.
T Consensus 84 ~~~~~~~~~~~~~~~~i-i~~~~~~ 107 (144)
T 2hmt_A 84 ASTLTTLLLKELDIPNI-WVKAQNY 107 (144)
T ss_dssp HHHHHHHHHHHTTCSEE-EEECCSH
T ss_pred HHHHHHHHHHHcCCCeE-EEEeCCH
Confidence 33233222223444444 4444433
No 213
>2xxj_A L-LDH, L-lactate dehydrogenase; oxidoreductase, hyperthermophIle; HET: NAD; 1.964A {Thermus thermophilus} PDB: 2xxb_A* 3zzn_A* 2v7p_A* 2e37_A* 2v6m_A* 2xxe_A 4a73_A
Probab=96.54 E-value=0.0036 Score=58.33 Aligned_cols=99 Identities=12% Similarity=0.091 Sum_probs=57.5
Q ss_pred CcEEEEcCChhhHHHHHHHH------------hhcHHHH-------hh-----CCCeEecChHHhhcCCCEEEEeeC-Cc
Q psy6714 133 SDKQIAGTTERGPGALIASL------------NIVSKAT-------GT-----MGAKITFDNKEVTLNSEVIILAVK-PH 187 (303)
Q Consensus 133 mkIgIIGlG~MG~~~La~al------------~r~~e~l-------~e-----~Gv~v~~d~~eav~~ADIVILAVp-P~ 187 (303)
|||+|||.|.+|.+ ++..+ +...+++ .. ..+.+..+..+++++||+||++.. |.
T Consensus 1 ~KI~IiGaG~vG~~-~a~~l~~~~~~~el~L~Di~~~k~~g~a~dl~~~~~~~~~~~v~~~~~~a~~~aD~Vii~ag~~~ 79 (310)
T 2xxj_A 1 MKVGIVGSGMVGSA-TAYALALLGVAREVVLVDLDRKLAQAHAEDILHATPFAHPVWVWAGSYGDLEGARAVVLAAGVAQ 79 (310)
T ss_dssp CEEEEECCSHHHHH-HHHHHHHTTCCSEEEEECSSHHHHHHHHHHHHTTGGGSCCCEEEECCGGGGTTEEEEEECCCCCC
T ss_pred CEEEEECCCHHHHH-HHHHHHhCCCCCEEEEEeCChhHHHHHHHHHHHhHhhcCCeEEEECCHHHhCCCCEEEECCCCCC
Confidence 79999999999994 44331 1111111 11 133444455778999999999984 32
Q ss_pred c---------------HHHHHHhhccccCCCCEEEEecCCCcHH--HHHhh--CCCCCceEEEecC
Q psy6714 188 I---------------VPVALNDIKPVFNESNLLISVAGGVPIK--NMEQA--LPKNSRIIRAMPN 234 (303)
Q Consensus 188 ~---------------v~~VL~eI~~~L~~g~IVVSiaaGV~ie--~L~~~--l~~~~~VVr~mPn 234 (303)
. +.++++.+..+ .++.+||-..+++..- .+.+. ++. .+++.++.+
T Consensus 80 ~~g~~r~dl~~~n~~i~~~i~~~i~~~-~p~a~iiv~tNPv~~~t~~~~k~s~~p~-~rviG~gt~ 143 (310)
T 2xxj_A 80 RPGETRLQLLDRNAQVFAQVVPRVLEA-APEAVLLVATNPVDVMTQVAYALSGLPP-GRVVGSGTI 143 (310)
T ss_dssp CTTCCHHHHHHHHHHHHHHHHHHHHHH-CTTCEEEECSSSHHHHHHHHHHHHTCCG-GGEEECTTH
T ss_pred CCCcCHHHHHHhhHHHHHHHHHHHHHH-CCCcEEEEecCchHHHHHHHHHHcCCCH-HHEEecCcc
Confidence 2 34455556655 3556666577777653 23333 442 366666444
No 214
>3d64_A Adenosylhomocysteinase; structural genomics, ssgcid, S-adenosyl-L-homocysteine hydro NAD, one-carbon metabolism; HET: NAD; 2.30A {Burkholderia pseudomallei} PDB: 3glq_A*
Probab=96.54 E-value=0.0034 Score=62.59 Aligned_cols=85 Identities=9% Similarity=0.138 Sum_probs=55.9
Q ss_pred CCCcEEEEcCChhhHHHHHHHHh----------hcHHH---HhhCCCeEecChHHhhcCCCEEEEeeCCcc-H-HHHHHh
Q psy6714 131 NRSDKQIAGTTERGPGALIASLN----------IVSKA---TGTMGAKITFDNKEVTLNSEVIILAVKPHI-V-PVALND 195 (303)
Q Consensus 131 ~~mkIgIIGlG~MG~~~La~al~----------r~~e~---l~e~Gv~v~~d~~eav~~ADIVILAVpP~~-v-~~VL~e 195 (303)
..++|+|||+|.||. .++..++ +.... ....|+.+ .+..+++++||+|++++.... + .+.+.
T Consensus 276 ~GktVgIIG~G~IG~-~vA~~l~~~G~~V~v~d~~~~~~~~a~~~G~~~-~~l~ell~~aDiVi~~~~t~~lI~~~~l~- 352 (494)
T 3d64_A 276 AGKIAVVAGYGDVGK-GCAQSLRGLGATVWVTEIDPICALQAAMEGYRV-VTMEYAADKADIFVTATGNYHVINHDHMK- 352 (494)
T ss_dssp TTCEEEEECCSHHHH-HHHHHHHTTTCEEEEECSCHHHHHHHHTTTCEE-CCHHHHTTTCSEEEECSSSSCSBCHHHHH-
T ss_pred CCCEEEEEccCHHHH-HHHHHHHHCCCEEEEEeCChHhHHHHHHcCCEe-CCHHHHHhcCCEEEECCCcccccCHHHHh-
Confidence 467899999999999 4665432 22222 23457765 578899999999999985332 2 23333
Q ss_pred hccccCCCCEEEEecCC---CcHHHHHhhC
Q psy6714 196 IKPVFNESNLLISVAGG---VPIKNMEQAL 222 (303)
Q Consensus 196 I~~~L~~g~IVVSiaaG---V~ie~L~~~l 222 (303)
.++++.+||.+.-| |+.+.| +.+
T Consensus 353 ---~MK~gAilINvgrg~veID~~aL-~AL 378 (494)
T 3d64_A 353 ---AMRHNAIVCNIGHFDSEIDVAST-RQY 378 (494)
T ss_dssp ---HCCTTEEEEECSSSSCSBCCGGG-TTS
T ss_pred ---hCCCCcEEEEcCCCcchhchHHH-Hhh
Confidence 45678888877654 355566 444
No 215
>3u3x_A Oxidoreductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.79A {Sinorhizobium meliloti}
Probab=96.52 E-value=0.0089 Score=56.29 Aligned_cols=85 Identities=8% Similarity=0.003 Sum_probs=52.2
Q ss_pred CcEEEEcCChhhHHHHHHHH-----------hhcHHH----HhhCC-CeEecChHHhhcC--CCEEEEeeCCccHHHHHH
Q psy6714 133 SDKQIAGTTERGPGALIASL-----------NIVSKA----TGTMG-AKITFDNKEVTLN--SEVIILAVKPHIVPVALN 194 (303)
Q Consensus 133 mkIgIIGlG~MG~~~La~al-----------~r~~e~----l~e~G-v~v~~d~~eav~~--ADIVILAVpP~~v~~VL~ 194 (303)
+||||||+|.+|...+...+ ++..++ .+++| ..+..|.++++++ .|+|++|+|+..-.+++.
T Consensus 27 irvgiiG~G~~~~~~~~~~~~~~~~~lvav~d~~~~~a~~~a~~~~~~~~~~~~~~ll~~~~vD~V~I~tp~~~H~~~~~ 106 (361)
T 3u3x_A 27 LRFAAVGLNHNHIYGQVNCLLRAGARLAGFHEKDDALAAEFSAVYADARRIATAEEILEDENIGLIVSAAVSSERAELAI 106 (361)
T ss_dssp CEEEEECCCSTTHHHHHHHHHHTTCEEEEEECSCHHHHHHHHHHSSSCCEESCHHHHHTCTTCCEEEECCCHHHHHHHHH
T ss_pred cEEEEECcCHHHHHHHHHHhhcCCcEEEEEEcCCHHHHHHHHHHcCCCcccCCHHHHhcCCCCCEEEEeCChHHHHHHHH
Confidence 68999999999953333221 122222 23566 5677899998875 899999999776666655
Q ss_pred hhccccCCCCEEEEec-CCCcHHHHHh
Q psy6714 195 DIKPVFNESNLLISVA-GGVPIKNMEQ 220 (303)
Q Consensus 195 eI~~~L~~g~IVVSia-aGV~ie~L~~ 220 (303)
... ..|+-|+.-. -..+.+..++
T Consensus 107 ~al---~aGkhVl~EKPla~~~~ea~~ 130 (361)
T 3u3x_A 107 RAM---QHGKDVLVDKPGMTSFDQLAK 130 (361)
T ss_dssp HHH---HTTCEEEEESCSCSSHHHHHH
T ss_pred HHH---HCCCeEEEeCCCCCCHHHHHH
Confidence 443 2455555321 1344544444
No 216
>3h9u_A Adenosylhomocysteinase; NAD CO-factor complex, structural genomics, SGC stockholm, S genomics consortium, SGC, hydrolase, NAD; HET: NAD ADN PG4; 1.90A {Trypanosoma brucei} PDB: 3g1u_A* 1b3r_A* 1k0u_A* 1ky4_A* 2h5l_A* 1xwf_A* 1d4f_A* 1ky5_A* 3nj4_A* 1li4_A* 1a7a_A*
Probab=96.52 E-value=0.0039 Score=61.30 Aligned_cols=87 Identities=9% Similarity=0.184 Sum_probs=56.9
Q ss_pred CCCcEEEEcCChhhHHHHHHHHh----------hcHH---HHhhCCCeEecChHHhhcCCCEEEEeeCCccHHHHHHhhc
Q psy6714 131 NRSDKQIAGTTERGPGALIASLN----------IVSK---ATGTMGAKITFDNKEVTLNSEVIILAVKPHIVPVALNDIK 197 (303)
Q Consensus 131 ~~mkIgIIGlG~MG~~~La~al~----------r~~e---~l~e~Gv~v~~d~~eav~~ADIVILAVpP~~v~~VL~eI~ 197 (303)
..++|+|||+|.||.+ ++..++ .+.. .+...|+.+ .+..++++++||||++.....+.+ .+..
T Consensus 210 ~GktVgIiG~G~IG~~-vA~~Lka~Ga~Viv~D~~p~~a~~A~~~G~~~-~sL~eal~~ADVVilt~gt~~iI~--~e~l 285 (436)
T 3h9u_A 210 AGKTACVCGYGDVGKG-CAAALRGFGARVVVTEVDPINALQAAMEGYQV-LLVEDVVEEAHIFVTTTGNDDIIT--SEHF 285 (436)
T ss_dssp TTCEEEEECCSHHHHH-HHHHHHHTTCEEEEECSCHHHHHHHHHTTCEE-CCHHHHTTTCSEEEECSSCSCSBC--TTTG
T ss_pred cCCEEEEEeeCHHHHH-HHHHHHHCCCEEEEECCChhhhHHHHHhCCee-cCHHHHHhhCCEEEECCCCcCccC--HHHH
Confidence 3678999999999994 554432 2221 233567765 578899999999999875443321 2334
Q ss_pred cccCCCCEEEEecCC---CcHHHHHhh
Q psy6714 198 PVFNESNLLISVAGG---VPIKNMEQA 221 (303)
Q Consensus 198 ~~L~~g~IVVSiaaG---V~ie~L~~~ 221 (303)
..++++.+||.+.-| |+.+.|...
T Consensus 286 ~~MK~gAIVINvgRg~vEID~~~L~~~ 312 (436)
T 3h9u_A 286 PRMRDDAIVCNIGHFDTEIQVAWLKAN 312 (436)
T ss_dssp GGCCTTEEEEECSSSGGGBCHHHHHHH
T ss_pred hhcCCCcEEEEeCCCCCccCHHHHHhh
Confidence 456788888877644 345566553
No 217
>1obb_A Maltase, alpha-glucosidase; glycosidase, sulfinic acid, NAD+, maltose, hydrolase; HET: MAL NAD; 1.90A {Thermotoga maritima} SCOP: c.2.1.5 d.162.1.2
Probab=96.51 E-value=0.0073 Score=59.97 Aligned_cols=64 Identities=8% Similarity=0.056 Sum_probs=41.9
Q ss_pred eEecChHHhhcCCCEEEEeeCCc------------------------------------------cHHHHHHhhccccCC
Q psy6714 165 KITFDNKEVTLNSEVIILAVKPH------------------------------------------IVPVALNDIKPVFNE 202 (303)
Q Consensus 165 ~v~~d~~eav~~ADIVILAVpP~------------------------------------------~v~~VL~eI~~~L~~ 202 (303)
..++|..+++++||+||++++.. .+.++++.|..+- +
T Consensus 66 ~~ttD~~eal~dAD~VIiaagv~~~~~~~~dE~ip~K~g~~~~l~dt~g~g~~~~G~~~~~rni~i~~~i~~~i~~~~-P 144 (480)
T 1obb_A 66 EKTMNLDDVIIDADFVINTAMVGGHTYLEKVRQIGEKYGYYRGIDAQEFNMVSDYYTFSNYNQLKYFVDIARKIEKLS-P 144 (480)
T ss_dssp EEESCHHHHHTTCSEEEECCCTTHHHHHHHHHHHHHHTTCTTCTTCBTTBCCTTCCSSSCHHHHHHHHHHHHHHHHHC-T
T ss_pred EEECCHHHHhCCCCEEEECCCcccccccccccccccccccccchhhhcCCccchhhhHHhhhhHHHHHHHHHHHHHHC-C
Confidence 34567678899999999999642 3345556666543 6
Q ss_pred CCEEEEecCCCcH--HHHHhhCCCCCceEEE
Q psy6714 203 SNLLISVAGGVPI--KNMEQALPKNSRIIRA 231 (303)
Q Consensus 203 g~IVVSiaaGV~i--e~L~~~l~~~~~VVr~ 231 (303)
+.+||-.++++.+ ..+.+ ++. .+++.+
T Consensus 145 ~A~ii~~TNPvdi~t~~~~k-~p~-~rviG~ 173 (480)
T 1obb_A 145 KAWYLQAANPIFEGTTLVTR-TVP-IKAVGF 173 (480)
T ss_dssp TCEEEECSSCHHHHHHHHHH-HSC-SEEEEE
T ss_pred CeEEEEeCCcHHHHHHHHHH-CCC-CcEEec
Confidence 7777878887765 33444 453 366655
No 218
>2zqz_A L-LDH, L-lactate dehydrogenase; oxidoreductase, rossmann fold, cytoplasm, glycolysis, NAD, phosphoprotein; 2.50A {Lactobacillus casei} PDB: 2zqy_A 3vkv_A* 1llc_A*
Probab=96.50 E-value=0.0041 Score=58.50 Aligned_cols=101 Identities=14% Similarity=0.198 Sum_probs=59.2
Q ss_pred CCcEEEEcCChhhHHHHHHHH------------hhcHHHH-------hh-----CCCeEecChHHhhcCCCEEEEeeCCc
Q psy6714 132 RSDKQIAGTTERGPGALIASL------------NIVSKAT-------GT-----MGAKITFDNKEVTLNSEVIILAVKPH 187 (303)
Q Consensus 132 ~mkIgIIGlG~MG~~~La~al------------~r~~e~l-------~e-----~Gv~v~~d~~eav~~ADIVILAVpP~ 187 (303)
+|||+|||+|.+|.+ ++..+ +...+++ .. ..+.+..+..+++++||+||++....
T Consensus 9 ~~KI~IiGaG~vG~~-la~~l~~~~~~~el~L~Di~~~~~~g~~~dl~~~~~~~~~~~i~~~~~~a~~~aDvVii~ag~~ 87 (326)
T 2zqz_A 9 HQKVILVGDGAVGSS-YAYAMVLQGIAQEIGIVDIFKDKTKGDAIDLSNALPFTSPKKIYSAEYSDAKDADLVVITAGAP 87 (326)
T ss_dssp CCEEEEECCSHHHHH-HHHHHHHHTCCSEEEEECSCHHHHHHHHHHHHTTGGGSCCCEEEECCGGGGGGCSEEEECCCCC
T ss_pred CCEEEEECCCHHHHH-HHHHHHcCCCCCEEEEEeCCchHhHHHHHHHHHHHHhcCCeEEEECCHHHhCCCCEEEEcCCCC
Confidence 589999999999994 44321 1111111 11 23445556677899999999998421
Q ss_pred ----------------cHHHHHHhhccccCCCCEEEEecCCCcHH--HHHhh--CCCCCceEEEecCc
Q psy6714 188 ----------------IVPVALNDIKPVFNESNLLISVAGGVPIK--NMEQA--LPKNSRIIRAMPNT 235 (303)
Q Consensus 188 ----------------~v~~VL~eI~~~L~~g~IVVSiaaGV~ie--~L~~~--l~~~~~VVr~mPn~ 235 (303)
.+.++++.+..+- ++.+||-..+++..- .+.+. ++. .+++.++.++
T Consensus 88 ~k~g~~R~dl~~~n~~i~~~i~~~i~~~~-p~a~iiv~tNPv~~~t~~~~k~s~~p~-~rviG~gt~L 153 (326)
T 2zqz_A 88 QKPGETRLDLVNKNLKILKSIVDPIVDSG-FNGIFLVAANPVDILTYATWKLSGFPK-NRVVGSGTSL 153 (326)
T ss_dssp -----CHHHHHHHHHHHHHHHHHHHHHHT-CCSEEEECSSSHHHHHHHHHHHHCCCG-GGEEECTTHH
T ss_pred CCCCCCHHHHHHHHHHHHHHHHHHHHHHC-CCeEEEEeCCcHHHHHHHHHHHcCCCH-HHEEEccccc
Confidence 2344455555553 566666677777653 33343 442 3666664443
No 219
>1omo_A Alanine dehydrogenase; two-domain, beta-sandwich-dimer, rossmann-fold NAD domain, human MU crystallin homolog; HET: NAD; 2.32A {Archaeoglobus fulgidus} SCOP: c.2.1.13 PDB: 1vll_A
Probab=96.48 E-value=0.0023 Score=59.88 Aligned_cols=72 Identities=14% Similarity=0.125 Sum_probs=45.2
Q ss_pred CCCcEEEEcCChhhHHHHHHHH------------hhcHHH---Hh----hC--CCeEecChHHhhcCCCEEEEeeCCccH
Q psy6714 131 NRSDKQIAGTTERGPGALIASL------------NIVSKA---TG----TM--GAKITFDNKEVTLNSEVIILAVKPHIV 189 (303)
Q Consensus 131 ~~mkIgIIGlG~MG~~~La~al------------~r~~e~---l~----e~--Gv~v~~d~~eav~~ADIVILAVpP~~v 189 (303)
..++|+|||+|.||.. .+..+ +++.++ +. .. ++. ..+.++++ ++|+||+|++...
T Consensus 124 ~~~~v~iIGaG~~a~~-~~~al~~~~~~~~V~v~~r~~~~a~~la~~~~~~~~~~~-~~~~~e~v-~aDvVi~aTp~~~- 199 (322)
T 1omo_A 124 NSSVFGFIGCGTQAYF-QLEALRRVFDIGEVKAYDVREKAAKKFVSYCEDRGISAS-VQPAEEAS-RCDVLVTTTPSRK- 199 (322)
T ss_dssp TCCEEEEECCSHHHHH-HHHHHHHHSCCCEEEEECSSHHHHHHHHHHHHHTTCCEE-ECCHHHHT-SSSEEEECCCCSS-
T ss_pred CCCEEEEEcCcHHHHH-HHHHHHHhCCccEEEEECCCHHHHHHHHHHHHhcCceEE-ECCHHHHh-CCCEEEEeeCCCC-
Confidence 3568999999999984 33322 222222 21 11 244 67788888 9999999998643
Q ss_pred HHHHHhhccccCCCCEEEEe
Q psy6714 190 PVALNDIKPVFNESNLLISV 209 (303)
Q Consensus 190 ~~VL~eI~~~L~~g~IVVSi 209 (303)
.++. ...++++++|+.+
T Consensus 200 -pv~~--~~~l~~G~~V~~i 216 (322)
T 1omo_A 200 -PVVK--AEWVEEGTHINAI 216 (322)
T ss_dssp -CCBC--GGGCCTTCEEEEC
T ss_pred -ceec--HHHcCCCeEEEEC
Confidence 2221 2356788876643
No 220
>2nvw_A Galactose/lactose metabolism regulatory protein GAL80; transcription, galactose metabolism, repressor; 2.10A {Kluyveromyces lactis} SCOP: c.2.1.3 d.81.1.5 PDB: 3e1k_A
Probab=96.37 E-value=0.017 Score=56.87 Aligned_cols=64 Identities=11% Similarity=0.025 Sum_probs=43.2
Q ss_pred CCcEEEEcC----ChhhHHHHHHHHhh-------------cHHH----HhhCCCe---EecChHHhhc--CCCEEEEeeC
Q psy6714 132 RSDKQIAGT----TERGPGALIASLNI-------------VSKA----TGTMGAK---ITFDNKEVTL--NSEVIILAVK 185 (303)
Q Consensus 132 ~mkIgIIGl----G~MG~~~La~al~r-------------~~e~----l~e~Gv~---v~~d~~eav~--~ADIVILAVp 185 (303)
++||||||+ |.||.. .+..+.. ..++ ..++|+. +..|..++++ +.|+|++|+|
T Consensus 39 ~irvgiIG~g~~GG~~g~~-h~~~l~~~~~~~~lvav~d~~~~~a~~~a~~~g~~~~~~~~d~~ell~~~~vD~V~I~tp 117 (479)
T 2nvw_A 39 PIRVGFVGLTSGKSWVAKT-HFLAIQQLSSQFQIVALYNPTLKSSLQTIEQLQLKHATGFDSLESFAQYKDIDMIVVSVK 117 (479)
T ss_dssp CEEEEEECCCSTTSHHHHT-HHHHHHHTTTTEEEEEEECSCHHHHHHHHHHTTCTTCEEESCHHHHHHCTTCSEEEECSC
T ss_pred cCEEEEEcccCCCCHHHHH-HHHHHHhcCCCeEEEEEEeCCHHHHHHHHHHcCCCcceeeCCHHHHhcCCCCCEEEEcCC
Confidence 579999999 899873 3333221 1122 2356763 7788888885 6899999999
Q ss_pred CccHHHHHHhh
Q psy6714 186 PHIVPVALNDI 196 (303)
Q Consensus 186 P~~v~~VL~eI 196 (303)
+..-.+++...
T Consensus 118 ~~~H~~~~~~a 128 (479)
T 2nvw_A 118 VPEHYEVVKNI 128 (479)
T ss_dssp HHHHHHHHHHH
T ss_pred cHHHHHHHHHH
Confidence 77666665443
No 221
>4gmf_A Yersiniabactin biosynthetic protein YBTU; rossmann fold, NADPH dependent thiazoline reductase, oxidore; HET: EPE; 1.85A {Yersinia enterocolitica subsp} PDB: 4gmg_A*
Probab=96.36 E-value=0.0065 Score=58.14 Aligned_cols=84 Identities=10% Similarity=0.142 Sum_probs=53.9
Q ss_pred CCcEEEEcCChhhHHHHHHHHh-------------hcHH----HHhhCCCeEecChHHhhcCCCEEEEeeCCccH----H
Q psy6714 132 RSDKQIAGTTERGPGALIASLN-------------IVSK----ATGTMGAKITFDNKEVTLNSEVIILAVKPHIV----P 190 (303)
Q Consensus 132 ~mkIgIIGlG~MG~~~La~al~-------------r~~e----~l~e~Gv~v~~d~~eav~~ADIVILAVpP~~v----~ 190 (303)
+.||+|||+| +|. ..+..+. +..+ ..+++|+...+|.++++++.|+|++|+|...- .
T Consensus 7 ~~rv~VvG~G-~g~-~h~~a~~~~~~~~elvav~~~~~~~a~~~a~~~gv~~~~~~~~l~~~~D~v~i~~p~~~h~~~~~ 84 (372)
T 4gmf_A 7 KQRVLIVGAK-FGE-MYLNAFMQPPEGLELVGLLAQGSARSRELAHAFGIPLYTSPEQITGMPDIACIVVRSTVAGGAGT 84 (372)
T ss_dssp CEEEEEECST-TTH-HHHHTTSSCCTTEEEEEEECCSSHHHHHHHHHTTCCEESSGGGCCSCCSEEEECCC--CTTSHHH
T ss_pred CCEEEEEehH-HHH-HHHHHHHhCCCCeEEEEEECCCHHHHHHHHHHhCCCEECCHHHHhcCCCEEEEECCCcccchhHH
Confidence 6789999999 787 4443321 1112 23578999889999999999999999986543 3
Q ss_pred HHHHhhccccCCCCEEEEecCCCcHHHHHhh
Q psy6714 191 VALNDIKPVFNESNLLISVAGGVPIKNMEQA 221 (303)
Q Consensus 191 ~VL~eI~~~L~~g~IVVSiaaGV~ie~L~~~ 221 (303)
++.... +..|+-|+ +-.+++.++.+++
T Consensus 85 ~~a~~a---l~aGkhVl-~EKPl~~~ea~~l 111 (372)
T 4gmf_A 85 QLARHF---LARGVHVI-QEHPLHPDDISSL 111 (372)
T ss_dssp HHHHHH---HHTTCEEE-EESCCCHHHHHHH
T ss_pred HHHHHH---HHcCCcEE-EecCCCHHHHHHH
Confidence 444332 23566555 3355776655554
No 222
>3nep_X Malate dehydrogenase; halophIle, molecular adpatation, NAD, oxidoreductase, tricarboxylic acid cycle; 1.55A {Salinibacter ruber}
Probab=96.36 E-value=0.0095 Score=55.85 Aligned_cols=81 Identities=17% Similarity=0.246 Sum_probs=48.5
Q ss_pred CcEEEEcCChhhHHHHHHHH------------hhcHHH-------Hh------hCCCeEe-cChHHhhcCCCEEEEeeC-
Q psy6714 133 SDKQIAGTTERGPGALIASL------------NIVSKA-------TG------TMGAKIT-FDNKEVTLNSEVIILAVK- 185 (303)
Q Consensus 133 mkIgIIGlG~MG~~~La~al------------~r~~e~-------l~------e~Gv~v~-~d~~eav~~ADIVILAVp- 185 (303)
|||+|||+|.||.+ ++..+ +...++ +. .....+. ++..+++++||+||++..
T Consensus 1 Mkv~ViGaG~vG~~-~a~~l~~~~~~~el~l~D~~~~k~~g~a~DL~~~~~~~~~~~~v~~~~~~~a~~~aDvVii~ag~ 79 (314)
T 3nep_X 1 MKVTVIGAGNVGAT-VAECVARQDVAKEVVMVDIKDGMPQGKALDMRESSPIHGFDTRVTGTNDYGPTEDSDVCIITAGL 79 (314)
T ss_dssp CEEEEECCSHHHHH-HHHHHHHHTCSSEEEEECSSTTHHHHHHHHHHHHHHHHTCCCEEEEESSSGGGTTCSEEEECCCC
T ss_pred CEEEEECCCHHHHH-HHHHHHhCCCCCEEEEEeCchHHHHHHHHHHhccccccCCCcEEEECCCHHHhCCCCEEEECCCC
Confidence 89999999999994 44331 111111 11 1234443 456778999999999983
Q ss_pred Cc---------------cHHHHHHhhccccCCCCEEEEecCCCcH
Q psy6714 186 PH---------------IVPVALNDIKPVFNESNLLISVAGGVPI 215 (303)
Q Consensus 186 P~---------------~v~~VL~eI~~~L~~g~IVVSiaaGV~i 215 (303)
|+ .+.++.+.+..+ .++.+|+-..++++.
T Consensus 80 ~~kpG~~R~dl~~~N~~i~~~i~~~i~~~-~p~a~vivvtNPvd~ 123 (314)
T 3nep_X 80 PRSPGMSRDDLLAKNTEIVGGVTEQFVEG-SPDSTIIVVANPLDV 123 (314)
T ss_dssp -------CHHHHHHHHHHHHHHHHHHHTT-CTTCEEEECCSSHHH
T ss_pred CCCCCCCHHHHHHhhHHHHHHHHHHHHHh-CCCcEEEecCCchhH
Confidence 21 123334455554 366677767777765
No 223
>3abi_A Putative uncharacterized protein PH1688; L-lysine dehydrogenase, oxidoreductase; HET: NAD; 2.44A {Pyrococcus horikoshii}
Probab=96.31 E-value=0.0092 Score=56.20 Aligned_cols=76 Identities=14% Similarity=0.108 Sum_probs=46.3
Q ss_pred CCCcEEEEcCChhhHHHHHHHHhhc---------HH---HHhhCCCeEe---cC---hHHhhcCCCEEEEeeCCccHHHH
Q psy6714 131 NRSDKQIAGTTERGPGALIASLNIV---------SK---ATGTMGAKIT---FD---NKEVTLNSEVIILAVKPHIVPVA 192 (303)
Q Consensus 131 ~~mkIgIIGlG~MG~~~La~al~r~---------~e---~l~e~Gv~v~---~d---~~eav~~ADIVILAVpP~~v~~V 192 (303)
+.|||.|||+|.||. .++..+.+. .+ ++++..-.+. .| ..++++++|+||.|+||..-..+
T Consensus 15 ~~mkilvlGaG~vG~-~~~~~L~~~~~v~~~~~~~~~~~~~~~~~~~~~~d~~d~~~l~~~~~~~DvVi~~~p~~~~~~v 93 (365)
T 3abi_A 15 RHMKVLILGAGNIGR-AIAWDLKDEFDVYIGDVNNENLEKVKEFATPLKVDASNFDKLVEVMKEFELVIGALPGFLGFKS 93 (365)
T ss_dssp -CCEEEEECCSHHHH-HHHHHHTTTSEEEEEESCHHHHHHHTTTSEEEECCTTCHHHHHHHHTTCSEEEECCCGGGHHHH
T ss_pred CccEEEEECCCHHHH-HHHHHHhcCCCeEEEEcCHHHHHHHhccCCcEEEecCCHHHHHHHHhCCCEEEEecCCcccchH
Confidence 478999999999999 465554221 12 2222211111 22 34567899999999999876666
Q ss_pred HHhhccccCCCCEEEEec
Q psy6714 193 LNDIKPVFNESNLLISVA 210 (303)
Q Consensus 193 L~eI~~~L~~g~IVVSia 210 (303)
++... ..++-+|+++
T Consensus 94 ~~~~~---~~g~~yvD~s 108 (365)
T 3abi_A 94 IKAAI---KSKVDMVDVS 108 (365)
T ss_dssp HHHHH---HHTCEEEECC
T ss_pred HHHHH---hcCcceEeee
Confidence 65433 2455566543
No 224
>1j5p_A Aspartate dehydrogenase; TM1643, structural genomics, JCSG, protein structure initiative, joint center for structural G oxidoreductase; HET: NAD; 1.90A {Thermotoga maritima} SCOP: c.2.1.3 d.81.1.3 PDB: 1h2h_A*
Probab=96.30 E-value=0.0029 Score=57.99 Aligned_cols=75 Identities=13% Similarity=0.158 Sum_probs=52.0
Q ss_pred CCcEEEEcCChhhHHHHHHHHhhcHH-------HHhhCCCeEecChHHhhcCCCEEEEeeCCccHHHHHHhhccccCCCC
Q psy6714 132 RSDKQIAGTTERGPGALIASLNIVSK-------ATGTMGAKITFDNKEVTLNSEVIILAVKPHIVPVALNDIKPVFNESN 204 (303)
Q Consensus 132 ~mkIgIIGlG~MG~~~La~al~r~~e-------~l~e~Gv~v~~d~~eav~~ADIVILAVpP~~v~~VL~eI~~~L~~g~ 204 (303)
+|+|++||+|+||. .++.. + ..+ +..++|+.++.|..+++.++|+|+-|-.++.+.+.+..+ |..|+
T Consensus 12 ~~rV~i~G~GaIG~-~v~~~-~-~leLv~v~~~k~gelgv~a~~d~d~lla~pD~VVe~A~~~av~e~~~~i---L~aG~ 85 (253)
T 1j5p_A 12 HMTVLIIGMGNIGK-KLVEL-G-NFEKIYAYDRISKDIPGVVRLDEFQVPSDVSTVVECASPEAVKEYSLQI---LKNPV 85 (253)
T ss_dssp CCEEEEECCSHHHH-HHHHH-S-CCSEEEEECSSCCCCSSSEECSSCCCCTTCCEEEECSCHHHHHHHHHHH---TTSSS
T ss_pred cceEEEECcCHHHH-HHHhc-C-CcEEEEEEeccccccCceeeCCHHHHhhCCCEEEECCCHHHHHHHHHHH---HHCCC
Confidence 69999999999999 45544 2 111 111236677788888888999999999888777755554 44666
Q ss_pred EEEEecCC
Q psy6714 205 LLISVAGG 212 (303)
Q Consensus 205 IVVSiaaG 212 (303)
=||+++.|
T Consensus 86 dvv~~S~g 93 (253)
T 1j5p_A 86 NYIIISTS 93 (253)
T ss_dssp EEEECCGG
T ss_pred CEEEcChh
Confidence 56655544
No 225
>3fwz_A Inner membrane protein YBAL; TRKA-N domain, E.coli, structural genomics, PSI-2, Pro structure initiative; HET: MSE AMP; 1.79A {Escherichia coli k-12}
Probab=96.29 E-value=0.019 Score=46.41 Aligned_cols=80 Identities=15% Similarity=0.076 Sum_probs=47.1
Q ss_pred CCcEEEEcCChhhHHHHHHHHhh----------cHH---HHhhCCCeEe-cC--hHHh-----hcCCCEEEEeeCCccHH
Q psy6714 132 RSDKQIAGTTERGPGALIASLNI----------VSK---ATGTMGAKIT-FD--NKEV-----TLNSEVIILAVKPHIVP 190 (303)
Q Consensus 132 ~mkIgIIGlG~MG~~~La~al~r----------~~e---~l~e~Gv~v~-~d--~~ea-----v~~ADIVILAVpP~~v~ 190 (303)
+++|.|+|+|.+|. .++..+.. +.+ .+.+.|+.+. .| ..+. ++++|+||++++.+...
T Consensus 7 ~~~viIiG~G~~G~-~la~~L~~~g~~v~vid~~~~~~~~~~~~g~~~i~gd~~~~~~l~~a~i~~ad~vi~~~~~~~~n 85 (140)
T 3fwz_A 7 CNHALLVGYGRVGS-LLGEKLLASDIPLVVIETSRTRVDELRERGVRAVLGNAANEEIMQLAHLECAKWLILTIPNGYEA 85 (140)
T ss_dssp CSCEEEECCSHHHH-HHHHHHHHTTCCEEEEESCHHHHHHHHHTTCEEEESCTTSHHHHHHTTGGGCSEEEECCSCHHHH
T ss_pred CCCEEEECcCHHHH-HHHHHHHHCCCCEEEEECCHHHHHHHHHcCCCEEECCCCCHHHHHhcCcccCCEEEEECCChHHH
Confidence 56799999999999 57765432 222 3446677543 22 1222 46899999999876544
Q ss_pred H-HHHhhccccCCCCEEEEecCCC
Q psy6714 191 V-ALNDIKPVFNESNLLISVAGGV 213 (303)
Q Consensus 191 ~-VL~eI~~~L~~g~IVVSiaaGV 213 (303)
. ++..++. +.++.-||..+...
T Consensus 86 ~~~~~~a~~-~~~~~~iiar~~~~ 108 (140)
T 3fwz_A 86 GEIVASARA-KNPDIEIIARAHYD 108 (140)
T ss_dssp HHHHHHHHH-HCSSSEEEEEESSH
T ss_pred HHHHHHHHH-HCCCCeEEEEECCH
Confidence 3 3333333 33444455444433
No 226
>1dih_A Dihydrodipicolinate reductase; oxidoreductase; HET: NDP; 2.20A {Escherichia coli} SCOP: c.2.1.3 d.81.1.3 PDB: 1arz_A* 1dru_A* 1drv_A* 1drw_A*
Probab=96.25 E-value=0.0029 Score=58.10 Aligned_cols=84 Identities=17% Similarity=0.154 Sum_probs=53.0
Q ss_pred CCcEEEEcC-ChhhHHHHHHHHhhcH------------HH-----H------hhCCCeEecChHHhhcCCCEEEEeeCCc
Q psy6714 132 RSDKQIAGT-TERGPGALIASLNIVS------------KA-----T------GTMGAKITFDNKEVTLNSEVIILAVKPH 187 (303)
Q Consensus 132 ~mkIgIIGl-G~MG~~~La~al~r~~------------e~-----l------~e~Gv~v~~d~~eav~~ADIVILAVpP~ 187 (303)
+|||+|+|+ |.||. .++..+.... +. + ...|+.+..+..++++++|+||-++.|.
T Consensus 5 ~mkV~V~Ga~G~mG~-~~~~~~~~~~~~elva~~d~~~~~~~g~d~~~~~g~~~~~v~~~~dl~~~l~~~DvVIDft~p~ 83 (273)
T 1dih_A 5 NIRVAIAGAGGRMGR-QLIQAALALEGVQLGAALEREGSSLLGSDAGELAGAGKTGVTVQSSLDAVKDDFDVFIDFTRPE 83 (273)
T ss_dssp BEEEEETTTTSHHHH-HHHHHHHHSTTEECCCEECCTTCTTCSCCTTCSSSSSCCSCCEESCSTTTTTSCSEEEECSCHH
T ss_pred CcEEEEECCCCHHHH-HHHHHHHhCCCCEEEEEEecCchhhhhhhHHHHcCCCcCCceecCCHHHHhcCCCEEEEcCChH
Confidence 589999998 99999 5665432111 01 0 1124555667777788999999777887
Q ss_pred cHHHHHHhhccccCCCCEEEEecCCCcHHHHH
Q psy6714 188 IVPVALNDIKPVFNESNLLISVAGGVPIKNME 219 (303)
Q Consensus 188 ~v~~VL~eI~~~L~~g~IVVSiaaGV~ie~L~ 219 (303)
...+.+..... .++-+|.-..|.+.+.+.
T Consensus 84 ~~~~~~~~a~~---~G~~vVigTtG~~~e~~~ 112 (273)
T 1dih_A 84 GTLNHLAFCRQ---HGKGMVIGTTGFDEAGKQ 112 (273)
T ss_dssp HHHHHHHHHHH---TTCEEEECCCCCCHHHHH
T ss_pred HHHHHHHHHHh---CCCCEEEECCCCCHHHHH
Confidence 77777665443 344445434478776443
No 227
>2d59_A Hypothetical protein PH1109; COA binding, structural genomics; 1.65A {Pyrococcus horikoshii} SCOP: c.2.1.8 PDB: 2d5a_A* 2e6u_X* 3qa9_A 3q9n_A* 3q9u_A*
Probab=96.24 E-value=0.004 Score=51.59 Aligned_cols=101 Identities=12% Similarity=0.040 Sum_probs=62.4
Q ss_pred CCcEEEEcC----ChhhHHHHHHHHhhc--------HHHHhhCCCeEecChHHhhcCCCEEEEeeCCccHHHHHHhhccc
Q psy6714 132 RSDKQIAGT----TERGPGALIASLNIV--------SKATGTMGAKITFDNKEVTLNSEVIILAVKPHIVPVALNDIKPV 199 (303)
Q Consensus 132 ~mkIgIIGl----G~MG~~~La~al~r~--------~e~l~e~Gv~v~~d~~eav~~ADIVILAVpP~~v~~VL~eI~~~ 199 (303)
..+|+|||+ |.+|. .++..+... ...-.-.|+.+..+..|+.+..|+++++||+..+.++++++...
T Consensus 22 p~~iaVVGas~~~g~~G~-~~~~~l~~~G~~v~~Vnp~~~~i~G~~~y~sl~~l~~~vDlvvi~vp~~~~~~vv~~~~~~ 100 (144)
T 2d59_A 22 YKKIALVGASPKPERDAN-IVMKYLLEHGYDVYPVNPKYEEVLGRKCYPSVLDIPDKIEVVDLFVKPKLTMEYVEQAIKK 100 (144)
T ss_dssp CCEEEEETCCSCTTSHHH-HHHHHHHHTTCEEEEECTTCSEETTEECBSSGGGCSSCCSEEEECSCHHHHHHHHHHHHHH
T ss_pred CCEEEEEccCCCCCchHH-HHHHHHHHCCCEEEEECCCCCeECCeeccCCHHHcCCCCCEEEEEeCHHHHHHHHHHHHHc
Confidence 457999999 78998 455443221 11101136666677888878899999999999999999887653
Q ss_pred cCCCCEEEEecCCCcHHHHHhhCCCCCceEEEecCcHH
Q psy6714 200 FNESNLLISVAGGVPIKNMEQALPKNSRIIRAMPNTPA 237 (303)
Q Consensus 200 L~~g~IVVSiaaGV~ie~L~~~l~~~~~VVr~mPn~p~ 237 (303)
- -..+| +..|...+.+.+.+.. ..+--..||...
T Consensus 101 g-i~~i~--~~~g~~~~~l~~~a~~-~Gi~vvGpnc~g 134 (144)
T 2d59_A 101 G-AKVVW--FQYNTYNREASKKADE-AGLIIVANRCMM 134 (144)
T ss_dssp T-CSEEE--ECTTCCCHHHHHHHHH-TTCEEEESCCHH
T ss_pred C-CCEEE--ECCCchHHHHHHHHHH-cCCEEEcCCchh
Confidence 2 23344 3455555556555432 112223377553
No 228
>3l4b_C TRKA K+ channel protien TM1088B; potassium channel, ring-gating complex, structural GEN PSI-2-2, protein structure initiative; HET: AMP; 3.45A {Thermotoga maritima}
Probab=96.24 E-value=0.013 Score=50.86 Aligned_cols=81 Identities=12% Similarity=0.075 Sum_probs=49.6
Q ss_pred CcEEEEcCChhhHHHHHHHHh----------hcHHH---Hh-hCCCeEe-cC---h---HHh-hcCCCEEEEeeCCccHH
Q psy6714 133 SDKQIAGTTERGPGALIASLN----------IVSKA---TG-TMGAKIT-FD---N---KEV-TLNSEVIILAVKPHIVP 190 (303)
Q Consensus 133 mkIgIIGlG~MG~~~La~al~----------r~~e~---l~-e~Gv~v~-~d---~---~ea-v~~ADIVILAVpP~~v~ 190 (303)
|||.|+|+|.+|. .++..+. ++.++ +. ..|+.+. .| . .++ ++++|+||++++.+...
T Consensus 1 M~iiIiG~G~~G~-~la~~L~~~g~~v~vid~~~~~~~~l~~~~~~~~i~gd~~~~~~l~~a~i~~ad~vi~~~~~d~~n 79 (218)
T 3l4b_C 1 MKVIIIGGETTAY-YLARSMLSRKYGVVIINKDRELCEEFAKKLKATIIHGDGSHKEILRDAEVSKNDVVVILTPRDEVN 79 (218)
T ss_dssp CCEEEECCHHHHH-HHHHHHHHTTCCEEEEESCHHHHHHHHHHSSSEEEESCTTSHHHHHHHTCCTTCEEEECCSCHHHH
T ss_pred CEEEEECCCHHHH-HHHHHHHhCCCeEEEEECCHHHHHHHHHHcCCeEEEcCCCCHHHHHhcCcccCCEEEEecCCcHHH
Confidence 7899999999999 5766542 22222 22 3466432 22 1 222 57899999999988777
Q ss_pred HHHHhhccccCCCCEEEEecCCCc
Q psy6714 191 VALNDIKPVFNESNLLISVAGGVP 214 (303)
Q Consensus 191 ~VL~eI~~~L~~g~IVVSiaaGV~ 214 (303)
.++..+...+.+..-||..+....
T Consensus 80 ~~~~~~a~~~~~~~~iia~~~~~~ 103 (218)
T 3l4b_C 80 LFIAQLVMKDFGVKRVVSLVNDPG 103 (218)
T ss_dssp HHHHHHHHHTSCCCEEEECCCSGG
T ss_pred HHHHHHHHHHcCCCeEEEEEeCcc
Confidence 666555443334444555544443
No 229
>1vkn_A N-acetyl-gamma-glutamyl-phosphate reductase; TM1782, structu genomics, JCSG, PSI, protein structure initiative, joint CE structural genomics; 1.80A {Thermotoga maritima} SCOP: c.2.1.3 d.81.1.1
Probab=96.24 E-value=0.0073 Score=57.68 Aligned_cols=148 Identities=16% Similarity=0.179 Sum_probs=82.8
Q ss_pred CCcEEEEc-CChhhHHHHHHHHhhcHH--------------HHhh------CCCeEe-cChHHhhcCCCEEEEeeCCccH
Q psy6714 132 RSDKQIAG-TTERGPGALIASLNIVSK--------------ATGT------MGAKIT-FDNKEVTLNSEVIILAVKPHIV 189 (303)
Q Consensus 132 ~mkIgIIG-lG~MG~~~La~al~r~~e--------------~l~e------~Gv~v~-~d~~eav~~ADIVILAVpP~~v 189 (303)
|.|||||| +|..|. .|.+.+..... .+.+ ..+.+. .+..+..+++|+||+|+|...-
T Consensus 13 ~~~V~IvGAtG~vG~-ellrlL~~hP~~el~~l~S~~~aG~~~~~~~p~~~~~l~~~~~~~~~~~~~~Dvvf~alp~~~s 91 (351)
T 1vkn_A 13 MIRAGIIGATGYTGL-ELVRLLKNHPEAKITYLSSRTYAGKKLEEIFPSTLENSILSEFDPEKVSKNCDVLFTALPAGAS 91 (351)
T ss_dssp CEEEEEESTTSHHHH-HHHHHHHHCTTEEEEEEECSTTTTSBHHHHCGGGCCCCBCBCCCHHHHHHHCSEEEECCSTTHH
T ss_pred eeEEEEECCCCHHHH-HHHHHHHcCCCcEEEEEeCcccccCChHHhChhhccCceEEeCCHHHhhcCCCEEEECCCcHHH
Confidence 56999997 899999 46654432211 0110 122221 2344444789999999999988
Q ss_pred HHHHHhhccccCCCCEEEEecCCCc---HHHHHhhCCCCCce------EEEecCcH-HhhhCCcEEEEeCCCCCHHHH-H
Q psy6714 190 PVALNDIKPVFNESNLLISVAGGVP---IKNMEQALPKNSRI------IRAMPNTP-ALVRQGASVFVRGSSASDQDA-Q 258 (303)
Q Consensus 190 ~~VL~eI~~~L~~g~IVVSiaaGV~---ie~L~~~l~~~~~V------Vr~mPn~p-~~v~~G~til~~g~~~~~e~~-e 258 (303)
.++...+ .+..||+..+..- .+..+++.+....+ +..+|-.. ..+..+ . ++.++++..... -
T Consensus 92 ~~~~~~~-----~g~~VIDlSsdfRl~~~~~y~~~y~~~h~~p~~~~~~yglPE~n~e~i~~a-~-iIANPgC~~t~~~l 164 (351)
T 1vkn_A 92 YDLVREL-----KGVKIIDLGADFRFDDPGVYREWYGKELSGYENIKRVYGLPELHREEIKNA-Q-VVGNPGCYPTSVIL 164 (351)
T ss_dssp HHHHTTC-----CSCEEEESSSTTTCSSHHHHHHHHCCCCTTGGGCCEEECCHHHHHHHHTTC-S-EEECCCHHHHHHHH
T ss_pred HHHHHHh-----CCCEEEECChhhhCCchhhhhhhcCCCCCchhhcCCceECCccCHHHhccC-C-EEeCCChHHHHHHH
Confidence 8877665 5778998877642 24455554421222 66666543 234433 2 334455555543 4
Q ss_pred HHHHHHHhcCCcEEcCCCCchhhhhhccchH
Q psy6714 259 TVINLFKSVGTCEEVPEYLLDGITGLSGSGP 289 (303)
Q Consensus 259 ~V~~Lfs~iG~~v~vdE~~~Da~tAlsGsgP 289 (303)
.+..|++..+.. .+.-..|...++||.|-
T Consensus 165 aL~PL~~~~~i~--~~~iiv~t~sgvSGAG~ 193 (351)
T 1vkn_A 165 ALAPALKHNLVD--PETILVDAKSGVSGAGR 193 (351)
T ss_dssp HHHHHHHTTCSC--CSEEEEEEEEEGGGGCS
T ss_pred HHHHHHHcCCCC--CCEEEEEEEeeccccCc
Confidence 466666553321 11224556666766654
No 230
>1cf2_P Protein (glyceraldehyde-3-phosphate dehydrogenase); oxydoreductase, oxidoreductase; HET: NAP; 2.10A {Methanothermus fervidus} SCOP: c.2.1.3 d.81.1.1
Probab=96.22 E-value=0.0049 Score=58.26 Aligned_cols=76 Identities=13% Similarity=0.101 Sum_probs=46.7
Q ss_pred CCcEEEEcCChhhHHHHHHHHhhcH----------------HHHhh------------------CCCeEecChHHhhcCC
Q psy6714 132 RSDKQIAGTTERGPGALIASLNIVS----------------KATGT------------------MGAKITFDNKEVTLNS 177 (303)
Q Consensus 132 ~mkIgIIGlG~MG~~~La~al~r~~----------------e~l~e------------------~Gv~v~~d~~eav~~A 177 (303)
|+||||+|.|.||. .+++.+.... ..+.. .++.+..+..+++.++
T Consensus 1 mikVgIiGaG~iG~-~l~r~L~~~~~~elvav~d~~~~~~~~~~~~~g~~~~~~~~~~v~~~~~~~l~v~~~~~~~~~~v 79 (337)
T 1cf2_P 1 MKAVAINGYGTVGK-RVADAIAQQDDMKVIGVSKTRPDFEARMALKKGYDLYVAIPERVKLFEKAGIEVAGTVDDMLDEA 79 (337)
T ss_dssp CEEEEEECCSTTHH-HHHHHHHTSSSEEEEEEEESSCSHHHHHHHHTTCCEEESSGGGHHHHHHTTCCCCEEHHHHHHTC
T ss_pred CeEEEEEeECHHHH-HHHHHHHcCCCcEEEEEEcCChhHHHHhcCCcchhhccccccceeeecCCceEEcCCHHHHhcCC
Confidence 57899999999999 5665432110 01111 1222323555667789
Q ss_pred CEEEEeeCCccHHHHHHhhccccCCCCEEEEecC
Q psy6714 178 EVIILAVKPHIVPVALNDIKPVFNESNLLISVAG 211 (303)
Q Consensus 178 DIVILAVpP~~v~~VL~eI~~~L~~g~IVVSiaa 211 (303)
|+||.|++.....+....+.. .|+.||...+
T Consensus 80 DvV~~atp~~~~~~~a~~~l~---aG~~VId~sp 110 (337)
T 1cf2_P 80 DIVIDCTPEGIGAKNLKMYKE---KGIKAIFQGG 110 (337)
T ss_dssp SEEEECCSTTHHHHHHHHHHH---HTCCEEECTT
T ss_pred CEEEECCCchhhHHHHHHHHH---cCCEEEEecC
Confidence 999999998877777655432 3444554443
No 231
>1b7g_O Protein (glyceraldehyde 3-phosphate dehydrogenase; archaea, hyperthermophIle, GAPDH, hyperthermophilic dehydrog oxidoreductase; 2.05A {Sulfolobus solfataricus} SCOP: c.2.1.3 d.81.1.1
Probab=96.21 E-value=0.01 Score=56.07 Aligned_cols=63 Identities=8% Similarity=0.046 Sum_probs=39.8
Q ss_pred CCcEEEEcCChhhHHHHHHHHhhcH----------------HHHhhCCCeEec-----------------ChHHhhcCCC
Q psy6714 132 RSDKQIAGTTERGPGALIASLNIVS----------------KATGTMGAKITF-----------------DNKEVTLNSE 178 (303)
Q Consensus 132 ~mkIgIIGlG~MG~~~La~al~r~~----------------e~l~e~Gv~v~~-----------------d~~eav~~AD 178 (303)
|+||||+|+|.||. .+++.+.... ..+...|+.+.. +.+++.+++|
T Consensus 1 ~ikVgIiGaG~iG~-~~~r~L~~~p~~elvav~d~~~~~~~~~a~~~g~~~~~~~~~~~~~~~~~v~v~~~~e~l~~~vD 79 (340)
T 1b7g_O 1 MVNVAVNGYGTIGK-RVADAIIKQPDMKLVGVAKTSPNYEAFIAHRRGIRIYVPQQSIKKFEESGIPVAGTVEDLIKTSD 79 (340)
T ss_dssp CEEEEEECCSHHHH-HHHHHHHTCTTEEEEEEECSSCSHHHHHHHHTTCCEECCGGGHHHHHTTTCCCCCCHHHHHHHCS
T ss_pred CeEEEEEecCHHHH-HHHHHHHcCCCCEEEEEEcCChHHHHHHHHhcCcceecCcCHHHHhcccccccccCHhHhhcCCC
Confidence 46899999999999 5665532211 112233444332 3334445799
Q ss_pred EEEEeeCCccHHHHHHh
Q psy6714 179 VIILAVKPHIVPVALND 195 (303)
Q Consensus 179 IVILAVpP~~v~~VL~e 195 (303)
+||+|++.....+....
T Consensus 80 vV~~aTp~~~s~~~a~~ 96 (340)
T 1b7g_O 80 IVVDTTPNGVGAQYKPI 96 (340)
T ss_dssp EEEECCSTTHHHHHHHH
T ss_pred EEEECCCCchhHHHHHH
Confidence 99999998876666644
No 232
>3upl_A Oxidoreductase; rossmann fold, NADPH binding; 1.50A {Brucella melitensis biovar abortus 230ORGANISM_TAXID} PDB: 3upy_A*
Probab=96.17 E-value=0.011 Score=58.31 Aligned_cols=74 Identities=18% Similarity=0.123 Sum_probs=45.0
Q ss_pred CCcEEEEcCChhhHHHHHHHHh------------hcHHH----HhhC-C----------------------CeEecChHH
Q psy6714 132 RSDKQIAGTTERGPGALIASLN------------IVSKA----TGTM-G----------------------AKITFDNKE 172 (303)
Q Consensus 132 ~mkIgIIGlG~MG~~~La~al~------------r~~e~----l~e~-G----------------------v~v~~d~~e 172 (303)
.+||||||+|.||. .++..+. ++.++ +.+. | ..++.|.++
T Consensus 23 ~IRVGIIGaG~iG~-~~~~~l~~~~~veLvAV~D~~~era~~~a~~~yG~~~~~~~~~~~~~i~~a~~~g~~~v~~D~ee 101 (446)
T 3upl_A 23 PIRIGLIGAGEMGT-DIVTQVARMQGIEVGALSARRLPNTFKAIRTAYGDEENAREATTESAMTRAIEAGKIAVTDDNDL 101 (446)
T ss_dssp CEEEEEECCSHHHH-HHHHHHTTSSSEEEEEEECSSTHHHHHHHHHHHSSSTTEEECSSHHHHHHHHHTTCEEEESCHHH
T ss_pred ceEEEEECChHHHH-HHHHHHhhCCCcEEEEEEeCCHHHHHHHHHHhcCCccccccccchhhhhhhhccCCceEECCHHH
Confidence 57999999999999 4554432 11122 1122 4 346778888
Q ss_pred hhc--CCCEEEEeeCCc-cHHHHHHhhccccCCCCEEEEe
Q psy6714 173 VTL--NSEVIILAVKPH-IVPVALNDIKPVFNESNLLISV 209 (303)
Q Consensus 173 av~--~ADIVILAVpP~-~v~~VL~eI~~~L~~g~IVVSi 209 (303)
+++ +.|+|++|+++. .-.+++.. .+..|+-|+..
T Consensus 102 LL~d~dIDaVviaTp~p~~H~e~a~~---AL~AGKHVv~~ 138 (446)
T 3upl_A 102 ILSNPLIDVIIDATGIPEVGAETGIA---AIRNGKHLVMM 138 (446)
T ss_dssp HHTCTTCCEEEECSCCHHHHHHHHHH---HHHTTCEEEEC
T ss_pred HhcCCCCCEEEEcCCChHHHHHHHHH---HHHcCCcEEec
Confidence 886 589999999753 22333322 23356667643
No 233
>1u8x_X Maltose-6'-phosphate glucosidase; structural genomics, PSI, protein structure initiative, MCSG glucosidase, NAD-dependent; HET: G6P NAD; 2.05A {Bacillus subtilis} SCOP: c.2.1.5 d.162.1.2
Probab=96.17 E-value=0.013 Score=58.05 Aligned_cols=65 Identities=14% Similarity=0.197 Sum_probs=45.8
Q ss_pred eEecChHHhhcCCCEEEEeeCCc------------------------------------cHHHHHHhhccccCCCCEEEE
Q psy6714 165 KITFDNKEVTLNSEVIILAVKPH------------------------------------IVPVALNDIKPVFNESNLLIS 208 (303)
Q Consensus 165 ~v~~d~~eav~~ADIVILAVpP~------------------------------------~v~~VL~eI~~~L~~g~IVVS 208 (303)
..+.|..+++++||+||++++.. .+.++++.+..+- ++.+||-
T Consensus 91 ~~t~D~~eal~~AD~VViaag~~~~~g~~rd~~ip~k~g~~~~eT~G~ggl~~~~rni~i~~~i~~~i~~~~-P~A~ii~ 169 (472)
T 1u8x_X 91 AATTDPEEAFTDVDFVMAHIRVGKYAMRALDEQIPLKYGVVGQETCGPGGIAYGMRSIGGVLEILDYMEKYS-PDAWMLN 169 (472)
T ss_dssp EEESCHHHHHSSCSEEEECCCTTHHHHHHHHHHHHHTTTCCCCSSSHHHHHHHHHHHHHHHHHHHHHHHHHC-TTCEEEE
T ss_pred EEECCHHHHHcCCCEEEEcCCCccccccchhhhhhhhcCcccccccCchhHHHHhhhHHHHHHHHHHHHHHC-CCeEEEE
Confidence 34457778899999999999873 2456666676644 7788888
Q ss_pred ecCCCcH--HHHHhhCCCCCceEEE
Q psy6714 209 VAGGVPI--KNMEQALPKNSRIIRA 231 (303)
Q Consensus 209 iaaGV~i--e~L~~~l~~~~~VVr~ 231 (303)
.++++.+ ..+.+..|. .+++.+
T Consensus 170 ~TNPvdi~T~~~~k~~p~-~rViG~ 193 (472)
T 1u8x_X 170 YSNPAAIVAEATRRLRPN-SKILNI 193 (472)
T ss_dssp CCSCHHHHHHHHHHHSTT-CCEEEC
T ss_pred eCCcHHHHHHHHHHhCCC-CCEEEe
Confidence 8888876 445566653 466665
No 234
>1lc0_A Biliverdin reductase A; oxidoreductase, tetrapyrrole, bIle pigment, heme, bilirubin, NADH; 1.20A {Rattus norvegicus} SCOP: c.2.1.3 d.81.1.4 PDB: 1lc3_A* 1gcu_A 2h63_A*
Probab=96.16 E-value=0.0066 Score=55.65 Aligned_cols=71 Identities=6% Similarity=0.054 Sum_probs=45.0
Q ss_pred CCcEEEEcCChhhHHHHHHHHhhc--HH-----------H-HhhCCCeEecChHHhhc--CCCEEEEeeCCccHHHHHHh
Q psy6714 132 RSDKQIAGTTERGPGALIASLNIV--SK-----------A-TGTMGAKITFDNKEVTL--NSEVIILAVKPHIVPVALND 195 (303)
Q Consensus 132 ~mkIgIIGlG~MG~~~La~al~r~--~e-----------~-l~e~Gv~v~~d~~eav~--~ADIVILAVpP~~v~~VL~e 195 (303)
++||||||+|.||.. .+..+... .. . ....|+. ..|.+++++ +.|+|++|+|+..-.+++..
T Consensus 7 ~~rvgiIG~G~iG~~-~~~~l~~~~~~~~~~lvav~d~~~~a~~~g~~-~~~~~ell~~~~vD~V~i~tp~~~H~~~~~~ 84 (294)
T 1lc0_A 7 KFGVVVVGVGRAGSV-RLRDLKDPRSAAFLNLIGFVSRRELGSLDEVR-QISLEDALRSQEIDVAYICSESSSHEDYIRQ 84 (294)
T ss_dssp SEEEEEECCSHHHHH-HHHHHTSHHHHTTEEEEEEECSSCCCEETTEE-BCCHHHHHHCSSEEEEEECSCGGGHHHHHHH
T ss_pred cceEEEEEEcHHHHH-HHHHHhccccCCCEEEEEEECchHHHHHcCCC-CCCHHHHhcCCCCCEEEEeCCcHhHHHHHHH
Confidence 679999999999984 33333221 00 0 1123444 367788876 68999999997766666554
Q ss_pred hccccCCCCEEE
Q psy6714 196 IKPVFNESNLLI 207 (303)
Q Consensus 196 I~~~L~~g~IVV 207 (303)
.. ..|+-|+
T Consensus 85 al---~aGkhVl 93 (294)
T 1lc0_A 85 FL---QAGKHVL 93 (294)
T ss_dssp HH---HTTCEEE
T ss_pred HH---HCCCcEE
Confidence 33 3456455
No 235
>3ldh_A Lactate dehydrogenase; oxidoreductase, CHOH donor, NAD acceptor; HET: NAD; 3.00A {Squalus acanthias} SCOP: i.12.1.1
Probab=96.15 E-value=0.0067 Score=57.45 Aligned_cols=82 Identities=11% Similarity=0.051 Sum_probs=50.5
Q ss_pred CCcEEEEcCChhhHHHHHHHH------------hhcHHH-------Hh---hC----CCeEecChHHhhcCCCEEEEeeC
Q psy6714 132 RSDKQIAGTTERGPGALIASL------------NIVSKA-------TG---TM----GAKITFDNKEVTLNSEVIILAVK 185 (303)
Q Consensus 132 ~mkIgIIGlG~MG~~~La~al------------~r~~e~-------l~---e~----Gv~v~~d~~eav~~ADIVILAVp 185 (303)
.|||+|||+|.||.+ ++..+ +...++ +. .+ .+..+.|.++ +++||+||++..
T Consensus 21 ~~kV~ViGaG~vG~~-~a~~la~~g~~~ev~L~Di~~~~~~g~a~DL~~~~~~~~~~~i~~t~d~~~-~~daDiVIitaG 98 (330)
T 3ldh_A 21 YNKITVVGCDAVGMA-DAISVLMKDLADEVALVDVMEDKLKGEMMDLEHGSLFLHTAKIVSGKDYSV-SAGSKLVVITAG 98 (330)
T ss_dssp CCEEEEESTTHHHHH-HHHHHHHHCCCSEEEEECSCHHHHHHHHHHHHHHGGGSCCSEEEEESSSCS-CSSCSEEEECCS
T ss_pred CCEEEEECCCHHHHH-HHHHHHhCCCCCeEEEEECCHHHHHHHHHHhhhhhhcccCCeEEEcCCHHH-hCCCCEEEEeCC
Confidence 689999999999994 44331 111111 11 11 1233456654 899999999963
Q ss_pred -C---------------ccHHHHHHhhccccCCCCEEEEecCCCcHH
Q psy6714 186 -P---------------HIVPVALNDIKPVFNESNLLISVAGGVPIK 216 (303)
Q Consensus 186 -P---------------~~v~~VL~eI~~~L~~g~IVVSiaaGV~ie 216 (303)
| ..+.++++++..+ .++.+|+-..+++++-
T Consensus 99 ~p~kpG~tR~dll~~N~~I~k~i~~~I~k~-~P~a~ilvvtNPvdi~ 144 (330)
T 3ldh_A 99 ARQQEGESRLNLVQRNVNIFKFIIPNIVKH-SPDCLKELHPELGTDK 144 (330)
T ss_dssp CCCCSSCCTTGGGHHHHHHHHHHHHHHHHH-CTTCEEEECSSSHHHH
T ss_pred CCCCCCCCHHHHHHhhHHHHHHHHHHHHhh-CCCceEEeCCCccHHH
Confidence 2 1245566677766 4677777777777653
No 236
>1xyg_A Putative N-acetyl-gamma-glutamyl-phosphate reduct; structural genomics, protein structure initiative, CENT eukaryotic structural genomics; 2.19A {Arabidopsis thaliana} SCOP: c.2.1.3 d.81.1.1 PDB: 2q49_A 2cvo_A
Probab=96.10 E-value=0.011 Score=56.38 Aligned_cols=147 Identities=10% Similarity=0.152 Sum_probs=81.6
Q ss_pred CCcEEEEc-CChhhHHHHHHHHhhcHH--------------HHh----h-CC-----CeEecChHHhhcCCCEEEEeeCC
Q psy6714 132 RSDKQIAG-TTERGPGALIASLNIVSK--------------ATG----T-MG-----AKITFDNKEVTLNSEVIILAVKP 186 (303)
Q Consensus 132 ~mkIgIIG-lG~MG~~~La~al~r~~e--------------~l~----e-~G-----v~v~~d~~eav~~ADIVILAVpP 186 (303)
++||+|+| +|.+|. .+++.+..... ++. . .| +.+ .+ .+..+++|+||+|++.
T Consensus 16 ~~kV~IiGAtG~iG~-~llr~L~~~p~~elvai~~~~~~g~~~~~~~~~~~~~v~~dl~~-~~-~~~~~~vDvVf~atp~ 92 (359)
T 1xyg_A 16 DIRIGLLGASGYTGA-EIVRLLANHPHFQVTLMTADRKAGQSMESVFPHLRAQKLPTLVS-VK-DADFSTVDAVFCCLPH 92 (359)
T ss_dssp CEEEEEECCSSHHHH-HHHHHHHTCSSEEEEEEBCSTTTTSCHHHHCGGGTTSCCCCCBC-GG-GCCGGGCSEEEECCCT
T ss_pred CcEEEEECcCCHHHH-HHHHHHHcCCCcEEEEEeCchhcCCCHHHhCchhcCccccccee-cc-hhHhcCCCEEEEcCCc
Confidence 46899999 999999 56655422110 010 0 11 111 22 3345689999999998
Q ss_pred ccHHHHHHhhccccCCCCEEEEecCCCc---HHHHHhhCCCC-------CceEEEecCcHH-hhhCCcEEEEeCCCCCHH
Q psy6714 187 HIVPVALNDIKPVFNESNLLISVAGGVP---IKNMEQALPKN-------SRIIRAMPNTPA-LVRQGASVFVRGSSASDQ 255 (303)
Q Consensus 187 ~~v~~VL~eI~~~L~~g~IVVSiaaGV~---ie~L~~~l~~~-------~~VVr~mPn~p~-~v~~G~til~~g~~~~~e 255 (303)
..-.+....+ ..|..||+..+... .+.++++.+.. ..++..+|-..- .+... .+ +..+++...
T Consensus 93 ~~s~~~a~~~----~aG~~VId~sa~~R~~~~~~y~~~y~~~~~~~~~l~~~vygvpE~n~~~i~~~-~i-IanpgC~tt 166 (359)
T 1xyg_A 93 GTTQEIIKEL----PTALKIVDLSADFRLRNIAEYEEWYGQPHKAVELQKEVVYGLTEILREDIKKA-RL-VANPGCYPT 166 (359)
T ss_dssp TTHHHHHHTS----CTTCEEEECSSTTTCSCHHHHHHHHSSCCSCHHHHTTCEECCHHHHHHHHHTC-SE-EECCCHHHH
T ss_pred hhHHHHHHHH----hCCCEEEECCccccCCchhhhhhhhcCCcCChhhcCCceEECCccCHHHhccC-CE-EECCCcHHH
Confidence 8877776654 36778888776543 24455555321 135666654432 23332 23 344555555
Q ss_pred HHHH-HHHHHHhcCCcEEcCCCCchhhhhhccchH
Q psy6714 256 DAQT-VINLFKSVGTCEEVPEYLLDGITGLSGSGP 289 (303)
Q Consensus 256 ~~e~-V~~Lfs~iG~~v~vdE~~~Da~tAlsGsgP 289 (303)
.... +..|.+..|.. .+.-.++...++||.|-
T Consensus 167 ~~~~~l~pL~~~~~i~--~~~i~v~t~~~~SGaG~ 199 (359)
T 1xyg_A 167 TIQLPLVPLLKANLIK--HENIIIDAKSGVSGAGR 199 (359)
T ss_dssp HHHHHHHHHHHTTCBC--SSSCEEEEEEEGGGGCS
T ss_pred HHHHHHHHHHHcCCCC--CCeEEEEEEEEccccCc
Confidence 5444 55555554421 12445666666666554
No 237
>1iuk_A Hypothetical protein TT1466; structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; 1.70A {Thermus thermophilus} SCOP: c.2.1.8 PDB: 1iul_A
Probab=96.10 E-value=0.0036 Score=51.74 Aligned_cols=100 Identities=9% Similarity=0.098 Sum_probs=62.9
Q ss_pred CCcEEEEcC----ChhhHHHHHHHHhh--------cHHH-Hhh-CCCeEecChHHhhcCCCEEEEeeCCccHHHHHHhhc
Q psy6714 132 RSDKQIAGT----TERGPGALIASLNI--------VSKA-TGT-MGAKITFDNKEVTLNSEVIILAVKPHIVPVALNDIK 197 (303)
Q Consensus 132 ~mkIgIIGl----G~MG~~~La~al~r--------~~e~-l~e-~Gv~v~~d~~eav~~ADIVILAVpP~~v~~VL~eI~ 197 (303)
..+|+|||+ |.||. .++..+.. +..+ ..+ .|+.+..+..|+.+..|+++++||+..+.++++++.
T Consensus 13 p~~vaVvGas~~~g~~G~-~~~~~l~~~G~~v~~vnp~~~~~~i~G~~~~~sl~el~~~vDlavi~vp~~~~~~v~~~~~ 91 (140)
T 1iuk_A 13 AKTIAVLGAHKDPSRPAH-YVPRYLREQGYRVLPVNPRFQGEELFGEEAVASLLDLKEPVDILDVFRPPSALMDHLPEVL 91 (140)
T ss_dssp CCEEEEETCCSSTTSHHH-HHHHHHHHTTCEEEEECGGGTTSEETTEECBSSGGGCCSCCSEEEECSCHHHHTTTHHHHH
T ss_pred CCEEEEECCCCCCCChHH-HHHHHHHHCCCEEEEeCCCcccCcCCCEEecCCHHHCCCCCCEEEEEeCHHHHHHHHHHHH
Confidence 457999999 79999 45544322 1111 111 467777788888788999999999999999998776
Q ss_pred cccCCCCEEEEecCCCcHHHHHhhCCC-CCceEEEecCcHH
Q psy6714 198 PVFNESNLLISVAGGVPIKNMEQALPK-NSRIIRAMPNTPA 237 (303)
Q Consensus 198 ~~L~~g~IVVSiaaGV~ie~L~~~l~~-~~~VVr~mPn~p~ 237 (303)
..- -+.+|+ ..|...+.+.+.+.. +..+ ..||...
T Consensus 92 ~~g-i~~i~~--~~g~~~~~~~~~a~~~Gir~--vgpnc~g 127 (140)
T 1iuk_A 92 ALR-PGLVWL--QSGIRHPEFEKALKEAGIPV--VADRCLM 127 (140)
T ss_dssp HHC-CSCEEE--CTTCCCHHHHHHHHHTTCCE--EESCCHH
T ss_pred HcC-CCEEEE--cCCcCHHHHHHHHHHcCCEE--EcCCccc
Confidence 532 334554 345545555554432 2232 3467554
No 238
>4fb5_A Probable oxidoreductase protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, GFO/IDH/MOCA family; 2.61A {Rhizobium etli}
Probab=96.09 E-value=0.014 Score=54.18 Aligned_cols=71 Identities=14% Similarity=0.110 Sum_probs=45.9
Q ss_pred CcEEEEcCChhhHHHHHHHHh-------------------hcH----HHHhhCCC-eEecChHHhhc--CCCEEEEeeCC
Q psy6714 133 SDKQIAGTTERGPGALIASLN-------------------IVS----KATGTMGA-KITFDNKEVTL--NSEVIILAVKP 186 (303)
Q Consensus 133 mkIgIIGlG~MG~~~La~al~-------------------r~~----e~l~e~Gv-~v~~d~~eav~--~ADIVILAVpP 186 (303)
.||||||+|.||. .-+..++ .+. +..+++|+ .+..|.+++++ +.|+|++|+|+
T Consensus 26 irvgiIG~G~ig~-~H~~a~~~~~~~~~~~~~~~lvav~d~~~~~a~~~a~~~g~~~~y~d~~ell~~~~iDaV~IatP~ 104 (393)
T 4fb5_A 26 LGIGLIGTGYMGK-CHALAWNAVKTVFGDVERPRLVHLAEANAGLAEARAGEFGFEKATADWRALIADPEVDVVSVTTPN 104 (393)
T ss_dssp CEEEEECCSHHHH-HHHHHHTTHHHHHCSSCCCEEEEEECC--TTHHHHHHHHTCSEEESCHHHHHHCTTCCEEEECSCG
T ss_pred ccEEEEcCCHHHH-HHHHHHHhhhhhhccCCCcEEEEEECCCHHHHHHHHHHhCCCeecCCHHHHhcCCCCcEEEECCCh
Confidence 4799999999997 3332211 111 12346687 47788888886 57999999997
Q ss_pred ccHHHHHHhhccccCCCCEEE
Q psy6714 187 HIVPVALNDIKPVFNESNLLI 207 (303)
Q Consensus 187 ~~v~~VL~eI~~~L~~g~IVV 207 (303)
..=.+++.... ..|+-|+
T Consensus 105 ~~H~~~a~~al---~aGkhVl 122 (393)
T 4fb5_A 105 QFHAEMAIAAL---EAGKHVW 122 (393)
T ss_dssp GGHHHHHHHHH---HTTCEEE
T ss_pred HHHHHHHHHHH---hcCCeEE
Confidence 77666654433 2455555
No 239
>3ip3_A Oxidoreductase, putative; structural genomics, PSI-2, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.14A {Thermotoga maritima}
Probab=96.08 E-value=0.0046 Score=57.40 Aligned_cols=73 Identities=10% Similarity=-0.019 Sum_probs=46.8
Q ss_pred CCCcEEEEcCChhhHHHHHHHH----------hhc----HHHH----hhCCC--eEecChHHhhc--CCCEEEEeeCCcc
Q psy6714 131 NRSDKQIAGTTERGPGALIASL----------NIV----SKAT----GTMGA--KITFDNKEVTL--NSEVIILAVKPHI 188 (303)
Q Consensus 131 ~~mkIgIIGlG~MG~~~La~al----------~r~----~e~l----~e~Gv--~v~~d~~eav~--~ADIVILAVpP~~ 188 (303)
|++||||||+|.+|. .++..+ ++. .+++ .++|+ .+..|.+++++ +.|+|++|+|+..
T Consensus 1 M~~rvgiiG~G~~~~-~~~~~l~~~~~lvav~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~vD~V~I~tp~~~ 79 (337)
T 3ip3_A 1 MSLKICVIGSSGHFR-YALEGLDEECSITGIAPGVPEEDLSKLEKAISEMNIKPKKYNNWWEMLEKEKPDILVINTVFSL 79 (337)
T ss_dssp -CEEEEEECSSSCHH-HHHTTCCTTEEEEEEECSSTTCCCHHHHHHHHTTTCCCEECSSHHHHHHHHCCSEEEECSSHHH
T ss_pred CceEEEEEccchhHH-HHHHhcCCCcEEEEEecCCchhhHHHHHHHHHHcCCCCcccCCHHHHhcCCCCCEEEEeCCcch
Confidence 467999999999998 444321 111 1222 23464 67788888886 4899999999776
Q ss_pred HHHHHHhhccccCCCCEEE
Q psy6714 189 VPVALNDIKPVFNESNLLI 207 (303)
Q Consensus 189 v~~VL~eI~~~L~~g~IVV 207 (303)
-.+++.... ..|+-|+
T Consensus 80 H~~~~~~al---~aGkhVl 95 (337)
T 3ip3_A 80 NGKILLEAL---ERKIHAF 95 (337)
T ss_dssp HHHHHHHHH---HTTCEEE
T ss_pred HHHHHHHHH---HCCCcEE
Confidence 555554433 2455455
No 240
>3vku_A L-LDH, L-lactate dehydrogenase; rossmann fold, NADH binding, oxidoreductase; 1.96A {Lactobacillus casei} PDB: 2zqz_A 2zqy_A 3vkv_A* 1llc_A*
Probab=96.03 E-value=0.014 Score=55.13 Aligned_cols=82 Identities=15% Similarity=0.216 Sum_probs=51.2
Q ss_pred CCcEEEEcCChhhHHHHHHHH------------hhcHHHH-------h---h--CCCeEecChHHhhcCCCEEEEeeC-C
Q psy6714 132 RSDKQIAGTTERGPGALIASL------------NIVSKAT-------G---T--MGAKITFDNKEVTLNSEVIILAVK-P 186 (303)
Q Consensus 132 ~mkIgIIGlG~MG~~~La~al------------~r~~e~l-------~---e--~Gv~v~~d~~eav~~ADIVILAVp-P 186 (303)
+|||+|||+|.||.+ ++..+ +...+++ . . .++.+..+..+++++||+||++.. |
T Consensus 9 ~~kV~ViGaG~vG~~-~a~~l~~~~~~~el~l~D~~~~k~~g~a~DL~~~~~~~~~~~i~~~~~~a~~~aDiVvi~ag~~ 87 (326)
T 3vku_A 9 HQKVILVGDGAVGSS-YAYAMVLQGIAQEIGIVDIFKDKTKGDAIDLEDALPFTSPKKIYSAEYSDAKDADLVVITAGAP 87 (326)
T ss_dssp CCEEEEECCSHHHHH-HHHHHHHHTCCSEEEEECSCHHHHHHHHHHHHTTGGGSCCCEEEECCGGGGTTCSEEEECCCCC
T ss_pred CCEEEEECCCHHHHH-HHHHHHhCCCCCeEEEEeCChHHHHHHHhhHhhhhhhcCCcEEEECcHHHhcCCCEEEECCCCC
Confidence 689999999999994 55432 1111111 1 1 145555666778999999999873 2
Q ss_pred ---------------ccHHHHHHhhccccCCCCEEEEecCCCcH
Q psy6714 187 ---------------HIVPVALNDIKPVFNESNLLISVAGGVPI 215 (303)
Q Consensus 187 ---------------~~v~~VL~eI~~~L~~g~IVVSiaaGV~i 215 (303)
..+.++.+.+..+- ++.+|+-..+++++
T Consensus 88 ~kpG~tR~dL~~~N~~I~~~i~~~i~~~~-p~a~ilvvtNPvdi 130 (326)
T 3vku_A 88 QKPGETRLDLVNKNLKILKSIVDPIVDSG-FNGIFLVAANPVDI 130 (326)
T ss_dssp ----------------CHHHHHHHHHTTT-CCSEEEECSSSHHH
T ss_pred CCCCchHHHHHHHHHHHHHHHHHHHHhcC-CceEEEEccCchHH
Confidence 12344555565543 56677777777765
No 241
>3do5_A HOM, homoserine dehydrogenase; NP_069768.1, putative homoserine dehydrogenase, structural G joint center for structural genomics, JCSG; 2.20A {Archaeoglobus fulgidus}
Probab=96.02 E-value=0.0053 Score=57.88 Aligned_cols=77 Identities=16% Similarity=0.136 Sum_probs=43.5
Q ss_pred CCcEEEEcCChhhHHHHHHHHhhcHHHHhh------------------------------C-CCeEec--ChHHhhc--C
Q psy6714 132 RSDKQIAGTTERGPGALIASLNIVSKATGT------------------------------M-GAKITF--DNKEVTL--N 176 (303)
Q Consensus 132 ~mkIgIIGlG~MG~~~La~al~r~~e~l~e------------------------------~-Gv~v~~--d~~eav~--~ 176 (303)
|+||||||+|.||.. ++..+....+.+++ . ...+.. |..++++ +
T Consensus 2 mirvgIiG~G~VG~~-~~~~l~~~~~~l~~~g~~~~lvaV~d~~~~~~~~id~~~~~~~~~~~~~~~~~~d~~~ll~~~~ 80 (327)
T 3do5_A 2 MIKIAIVGFGTVGQG-VAELLIRKREEIEKAIGEFKVTAVADSKSSISGDFSLVEALRMKRETGMLRDDAKAIEVVRSAD 80 (327)
T ss_dssp CEEEEEECCSHHHHH-HHHHHHHTHHHHHHHHCCEEEEEEECSSCEEESSCCHHHHHHHHHHHSSCSBCCCHHHHHHHSC
T ss_pred cEEEEEEeccHHHHH-HHHHHHhhHHHHHhcCCCEEEEEEEeCChHhccccCHHHHHhhhccCccccCCCCHHHHhcCCC
Confidence 789999999999994 55444332111100 0 111223 6677765 5
Q ss_pred CCEEEEeeCCccH-HHHHHhhccccCCCCEEEEe
Q psy6714 177 SEVIILAVKPHIV-PVALNDIKPVFNESNLLISV 209 (303)
Q Consensus 177 ADIVILAVpP~~v-~~VL~eI~~~L~~g~IVVSi 209 (303)
.|+|+.|+|+..- .+..+.+...+..|+-||+.
T Consensus 81 iDvVv~~tp~~~h~~~a~~~~~~aL~aGkhVv~~ 114 (327)
T 3do5_A 81 YDVLIEASVTRVDGGEGVNYIREALKRGKHVVTS 114 (327)
T ss_dssp CSEEEECCCCC----CHHHHHHHHHTTTCEEEEC
T ss_pred CCEEEECCCCcccchhHHHHHHHHHHCCCeEEec
Confidence 8999999987641 11222223345567767644
No 242
>3p2y_A Alanine dehydrogenase/pyridine nucleotide transhy; seattle structural genomics center for infectious disease, S tuberculosis; 1.82A {Mycobacterium smegmatis str}
Probab=95.99 E-value=0.0051 Score=59.43 Aligned_cols=74 Identities=11% Similarity=0.219 Sum_probs=46.7
Q ss_pred CCcEEEEcCChhhHHHHHHHH----------hhcH---HHHhhCCCeEec-------------------------ChHHh
Q psy6714 132 RSDKQIAGTTERGPGALIASL----------NIVS---KATGTMGAKITF-------------------------DNKEV 173 (303)
Q Consensus 132 ~mkIgIIGlG~MG~~~La~al----------~r~~---e~l~e~Gv~v~~-------------------------d~~ea 173 (303)
..||+|||+|.||.. ++..+ ++.. +.+.++|..... +..++
T Consensus 184 ~~kV~ViG~G~iG~~-aa~~a~~lGa~V~v~D~~~~~l~~~~~lGa~~~~l~~~~~~~~gya~~~~~~~~~~~~~~l~e~ 262 (381)
T 3p2y_A 184 PASALVLGVGVAGLQ-ALATAKRLGAKTTGYDVRPEVAEQVRSVGAQWLDLGIDAAGEGGYARELSEAERAQQQQALEDA 262 (381)
T ss_dssp CCEEEEESCSHHHHH-HHHHHHHHTCEEEEECSSGGGHHHHHHTTCEECCCC-------------CHHHHHHHHHHHHHH
T ss_pred CCEEEEECchHHHHH-HHHHHHHCCCEEEEEeCCHHHHHHHHHcCCeEEeccccccccccchhhhhHHHHhhhHHHHHHH
Confidence 468999999999984 33321 2222 345566765422 34578
Q ss_pred hcCCCEEEEee--CC----c-cHHHHHHhhccccCCCCEEEEec
Q psy6714 174 TLNSEVIILAV--KP----H-IVPVALNDIKPVFNESNLLISVA 210 (303)
Q Consensus 174 v~~ADIVILAV--pP----~-~v~~VL~eI~~~L~~g~IVVSia 210 (303)
++++||||.++ |. . ..++.++. ++++.+||.++
T Consensus 263 l~~aDIVI~tv~iPg~~ap~Lvt~emv~~----MkpGsVIVDvA 302 (381)
T 3p2y_A 263 ITKFDIVITTALVPGRPAPRLVTAAAATG----MQPGSVVVDLA 302 (381)
T ss_dssp HTTCSEEEECCCCTTSCCCCCBCHHHHHT----SCTTCEEEETT
T ss_pred HhcCCEEEECCCCCCcccceeecHHHHhc----CCCCcEEEEEe
Confidence 89999999987 32 1 12444444 55788888764
No 243
>3fi9_A Malate dehydrogenase; structural genomics, oxidoreductase, PSI-2, protein structur initiative; 1.90A {Porphyromonas gingivalis}
Probab=95.97 E-value=0.011 Score=56.12 Aligned_cols=83 Identities=18% Similarity=0.180 Sum_probs=48.4
Q ss_pred CCCcEEEEcC-ChhhHHHHHHHH------------hhcHHH-------Hhh-----CCCeEecChHHhhcCCCEEEEeeC
Q psy6714 131 NRSDKQIAGT-TERGPGALIASL------------NIVSKA-------TGT-----MGAKITFDNKEVTLNSEVIILAVK 185 (303)
Q Consensus 131 ~~mkIgIIGl-G~MG~~~La~al------------~r~~e~-------l~e-----~Gv~v~~d~~eav~~ADIVILAVp 185 (303)
.+|||+|||+ |.+|.. ++.++ +...++ +.. ..+..+.+..+++++||+||++.-
T Consensus 7 ~~~KV~ViGaaG~VG~~-~a~~l~~~g~~~evvLiDi~~~k~~g~a~DL~~~~~~~~~i~~t~d~~~al~dADvVvitaG 85 (343)
T 3fi9_A 7 TEEKLTIVGAAGMIGSN-MAQTAAMMRLTPNLCLYDPFAVGLEGVAEEIRHCGFEGLNLTFTSDIKEALTDAKYIVSSGG 85 (343)
T ss_dssp CSSEEEEETTTSHHHHH-HHHHHHHTTCCSCEEEECSCHHHHHHHHHHHHHHCCTTCCCEEESCHHHHHTTEEEEEECCC
T ss_pred CCCEEEEECCCChHHHH-HHHHHHhcCCCCEEEEEeCCchhHHHHHHhhhhCcCCCCceEEcCCHHHHhCCCCEEEEccC
Confidence 4689999997 999994 44221 111111 111 234555677788999999999972
Q ss_pred -C---c------------cHHHHHHhhccccCCCCE-EEEecCCCcH
Q psy6714 186 -P---H------------IVPVALNDIKPVFNESNL-LISVAGGVPI 215 (303)
Q Consensus 186 -P---~------------~v~~VL~eI~~~L~~g~I-VVSiaaGV~i 215 (303)
| . .+.++++.+..+- ++.+ |+-+.+++++
T Consensus 86 ~p~kpG~~R~dLl~~N~~I~~~i~~~i~~~~-p~a~~vlvvsNPvd~ 131 (343)
T 3fi9_A 86 APRKEGMTREDLLKGNAEIAAQLGKDIKSYC-PDCKHVIIIFNPADI 131 (343)
T ss_dssp -------CHHHHHHHHHHHHHHHHHHHHHHC-TTCCEEEECSSSHHH
T ss_pred CCCCCCCCHHHHHHHHHHHHHHHHHHHHHhc-cCcEEEEEecCchHH
Confidence 2 1 1233444555544 4443 5556677654
No 244
>3oqb_A Oxidoreductase; structural genomics, protein structure INI NEW YORK structural genomix research consortium, NYSGXRC, PSI-2; 2.60A {Bradyrhizobium japonicum}
Probab=95.93 E-value=0.014 Score=54.91 Aligned_cols=86 Identities=12% Similarity=0.132 Sum_probs=53.5
Q ss_pred CCcEEEEc-CChhhHHHHH----HHHh---------------------hcHHH----HhhCCC-eEecChHHhhcC--CC
Q psy6714 132 RSDKQIAG-TTERGPGALI----ASLN---------------------IVSKA----TGTMGA-KITFDNKEVTLN--SE 178 (303)
Q Consensus 132 ~mkIgIIG-lG~MG~~~La----~al~---------------------r~~e~----l~e~Gv-~v~~d~~eav~~--AD 178 (303)
.+|||||| +|.||....+ ..+. ++.++ .+++|+ .+..|.++++++ .|
T Consensus 6 ~irigiiG~~G~~g~~~h~~~~~~~~~~~~~~~l~~~~~~~~~~av~~~~~~~a~~~a~~~~~~~~~~~~~~ll~~~~iD 85 (383)
T 3oqb_A 6 RLGLIMNGVTGRMGLNQHLIRSIVAIRDQGGVRLKNGDRIMPDPILVGRSAEKVEALAKRFNIARWTTDLDAALADKNDT 85 (383)
T ss_dssp EEEEEEESTTSTHHHHTTTTTTHHHHHHHTSEECTTSCEEEEEEEEECSSSHHHHHHHHHTTCCCEESCHHHHHHCSSCC
T ss_pred eeEEEEEeccchhhhhhhHHHHHHHHhhcCceeecCCcccceeeEEEcCCHHHHHHHHHHhCCCcccCCHHHHhcCCCCC
Confidence 57899999 9999983022 2111 11222 235788 477889998865 89
Q ss_pred EEEEeeCCccHHHHHHhhccccCCCCEEEEecC--CCcHHHHHhh
Q psy6714 179 VIILAVKPHIVPVALNDIKPVFNESNLLISVAG--GVPIKNMEQA 221 (303)
Q Consensus 179 IVILAVpP~~v~~VL~eI~~~L~~g~IVVSiaa--GV~ie~L~~~ 221 (303)
+|++|+|+..-.+++... +..|+-|+ +-. +.+.+..+++
T Consensus 86 ~V~i~tp~~~h~~~~~~a---l~~Gk~V~-~EKP~a~~~~~~~~l 126 (383)
T 3oqb_A 86 MFFDAATTQARPGLLTQA---INAGKHVY-CEKPIATNFEEALEV 126 (383)
T ss_dssp EEEECSCSSSSHHHHHHH---HTTTCEEE-ECSCSCSSHHHHHHH
T ss_pred EEEECCCchHHHHHHHHH---HHCCCeEE-EcCCCCCCHHHHHHH
Confidence 999999976666665443 33566666 333 3455444443
No 245
>4dpl_A Malonyl-COA/succinyl-COA reductase; dinucleotide binding, dimerization domain, NADP, oxidoreductase; HET: NAP; 1.90A {Sulfolobus tokodaii} PDB: 4dpk_A* 4dpm_A*
Probab=95.89 E-value=0.0076 Score=57.57 Aligned_cols=78 Identities=15% Similarity=0.106 Sum_probs=49.6
Q ss_pred CCcEEEEc-CChhhHHHHHHHHhhcH--------------HHHhh--------------CCCeEecChHHhhcCCCEEEE
Q psy6714 132 RSDKQIAG-TTERGPGALIASLNIVS--------------KATGT--------------MGAKITFDNKEVTLNSEVIIL 182 (303)
Q Consensus 132 ~mkIgIIG-lG~MG~~~La~al~r~~--------------e~l~e--------------~Gv~v~~d~~eav~~ADIVIL 182 (303)
++|||||| +|..|. .|...+.... +.+.+ ....+.....+.+.++|+||+
T Consensus 7 ~~kVaIvGATGyvG~-eLlrlL~~hP~~el~~l~S~~saGk~~~~~~p~~~~~~~~~~~~~~~v~~~~~~~~~~vDvvf~ 85 (359)
T 4dpl_A 7 TLKAAILGATGLVGI-EYVRMLSNHPYIKPAYLAGKGSVGKPYGEVVRWQTVGQVPKEIADMEIKPTDPKLMDDVDIIFS 85 (359)
T ss_dssp CEEEEETTTTSTTHH-HHHHHHTTCSSEEEEEEEESTTTTSBHHHHCCCCSSSCCCHHHHTCBCEECCGGGCTTCCEEEE
T ss_pred CCeEEEECCCCHHHH-HHHHHHHhCCCceEEEEECchhcCCChhHhcccccccccccccccceEEeCCHHHhcCCCEEEE
Confidence 57899999 899999 4555433211 01111 012222212234578999999
Q ss_pred eeCCccHHHHHHhhccccCCCCEEEEecCCC
Q psy6714 183 AVKPHIVPVALNDIKPVFNESNLLISVAGGV 213 (303)
Q Consensus 183 AVpP~~v~~VL~eI~~~L~~g~IVVSiaaGV 213 (303)
|++...-.++...+.. .|..||++.+..
T Consensus 86 a~p~~~s~~~a~~~~~---~G~~vIDlSa~~ 113 (359)
T 4dpl_A 86 PLPQGAAGPVEEQFAK---EGFPVISNSPDH 113 (359)
T ss_dssp CCCTTTHHHHHHHHHH---TTCEEEECSSTT
T ss_pred CCChHHHHHHHHHHHH---CCCEEEEcCCCc
Confidence 9999988888877643 677888887654
No 246
>4dpk_A Malonyl-COA/succinyl-COA reductase; dinucleotide binding, dimerization domain, NADP, oxidoreductase; 2.05A {Sulfolobus tokodaii} PDB: 4dpm_A*
Probab=95.89 E-value=0.0076 Score=57.57 Aligned_cols=78 Identities=15% Similarity=0.106 Sum_probs=49.5
Q ss_pred CCcEEEEc-CChhhHHHHHHHHhhcH--------------HHHhh--------------CCCeEecChHHhhcCCCEEEE
Q psy6714 132 RSDKQIAG-TTERGPGALIASLNIVS--------------KATGT--------------MGAKITFDNKEVTLNSEVIIL 182 (303)
Q Consensus 132 ~mkIgIIG-lG~MG~~~La~al~r~~--------------e~l~e--------------~Gv~v~~d~~eav~~ADIVIL 182 (303)
++|||||| +|..|. .|...+.... +.+.+ ....+.....+.+.++|+||+
T Consensus 7 ~~kVaIvGATGyvG~-eLlrlL~~hP~~el~~l~S~~saGk~~~~~~p~~~~~~~~~~~~~~~v~~~~~~~~~~vDvvf~ 85 (359)
T 4dpk_A 7 TLKAAILGATGLVGI-EYVRMLSNHPYIKPAYLAGKGSVGKPYGEVVRWQTVGQVPKEIADMEIKPTDPKLMDDVDIIFS 85 (359)
T ss_dssp CEEEEETTTTSTTHH-HHHHHHTTCSSEEEEEEEESTTTTSBHHHHCCCCSSSCCCHHHHTCBCEECCGGGCTTCCEEEE
T ss_pred CCeEEEECCCCHHHH-HHHHHHHhCCCceEEEEECchhcCCChhHhcccccccccccccccceEEeCCHHHhcCCCEEEE
Confidence 57899999 899999 4555433211 01111 012222212234578999999
Q ss_pred eeCCccHHHHHHhhccccCCCCEEEEecCCC
Q psy6714 183 AVKPHIVPVALNDIKPVFNESNLLISVAGGV 213 (303)
Q Consensus 183 AVpP~~v~~VL~eI~~~L~~g~IVVSiaaGV 213 (303)
|++...-.++...+.. .|..||++.+..
T Consensus 86 a~p~~~s~~~a~~~~~---~G~~vIDlSa~~ 113 (359)
T 4dpk_A 86 PLPQGAAGPVEEQFAK---EGFPVISNSPDH 113 (359)
T ss_dssp CCCTTTHHHHHHHHHH---TTCEEEECSSTT
T ss_pred CCChHHHHHHHHHHHH---CCCEEEEcCCCc
Confidence 9999988888877643 577888877654
No 247
>1ys4_A Aspartate-semialdehyde dehydrogenase; oxidoreductase, asadh; HET: NAP; 2.29A {Methanocaldococcus jannaschii}
Probab=95.86 E-value=0.0089 Score=56.59 Aligned_cols=77 Identities=14% Similarity=0.178 Sum_probs=48.0
Q ss_pred CCcEEEEc-CChhhHHHHHHHHhhcH-----------H----HHh-hCC-------------CeEe-cChHHhhc-CCCE
Q psy6714 132 RSDKQIAG-TTERGPGALIASLNIVS-----------K----ATG-TMG-------------AKIT-FDNKEVTL-NSEV 179 (303)
Q Consensus 132 ~mkIgIIG-lG~MG~~~La~al~r~~-----------e----~l~-e~G-------------v~v~-~d~~eav~-~ADI 179 (303)
+|||+|+| +|.+|. .|++.+.... . .+. .++ +.+. .+..+.++ ++|+
T Consensus 8 ~~kV~IiGAtG~iG~-~llr~L~~~p~~ev~~i~~s~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv 86 (354)
T 1ys4_A 8 KIKVGVLGATGSVGQ-RFVQLLADHPMFELTALAASERSAGKKYKDACYWFQDRDIPENIKDMVVIPTDPKHEEFEDVDI 86 (354)
T ss_dssp CEEEEEETTTSHHHH-HHHHHHTTCSSEEEEEEEECTTTTTSBHHHHSCCCCSSCCCHHHHTCBCEESCTTSGGGTTCCE
T ss_pred cceEEEECcCCHHHH-HHHHHHhcCCCCEEEEEEcccccccccHHHhcccccccccccCceeeEEEeCCHHHHhcCCCCE
Confidence 47999999 999999 5665532111 0 010 011 1111 24445446 8999
Q ss_pred EEEeeCCccHHHHHHhhccccCCCCEEEEecCC
Q psy6714 180 IILAVKPHIVPVALNDIKPVFNESNLLISVAGG 212 (303)
Q Consensus 180 VILAVpP~~v~~VL~eI~~~L~~g~IVVSiaaG 212 (303)
||+|++.....+++..+.. .|..||+..+.
T Consensus 87 V~~atp~~~~~~~a~~~~~---aG~~VId~s~~ 116 (354)
T 1ys4_A 87 VFSALPSDLAKKFEPEFAK---EGKLIFSNASA 116 (354)
T ss_dssp EEECCCHHHHHHHHHHHHH---TTCEEEECCST
T ss_pred EEECCCchHHHHHHHHHHH---CCCEEEECCch
Confidence 9999998877777766543 56778877653
No 248
>4h3v_A Oxidoreductase domain protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; HET: MSE; 1.68A {Kribbella flavida}
Probab=95.85 E-value=0.015 Score=53.87 Aligned_cols=71 Identities=10% Similarity=0.048 Sum_probs=45.9
Q ss_pred CcEEEEcCChhhHHHHHHHHh-------------------hcHHH----HhhCCC-eEecChHHhhc--CCCEEEEeeCC
Q psy6714 133 SDKQIAGTTERGPGALIASLN-------------------IVSKA----TGTMGA-KITFDNKEVTL--NSEVIILAVKP 186 (303)
Q Consensus 133 mkIgIIGlG~MG~~~La~al~-------------------r~~e~----l~e~Gv-~v~~d~~eav~--~ADIVILAVpP 186 (303)
.||||||+|.||. ..+..+. .+.++ ..++|+ .+..|.+++++ +.|+|++|+|+
T Consensus 7 lrvgiIG~G~ig~-~h~~~~~~~~~~~~~~~~~~l~av~d~~~~~a~~~a~~~g~~~~~~d~~~ll~~~~iDaV~I~tP~ 85 (390)
T 4h3v_A 7 LGIGLIGYAFMGA-AHSQAWRSAPRFFDLPLHPDLNVLCGRDAEAVRAAAGKLGWSTTETDWRTLLERDDVQLVDVCTPG 85 (390)
T ss_dssp EEEEEECHHHHHH-HHHHHHHHHHHHSCCSSEEEEEEEECSSHHHHHHHHHHHTCSEEESCHHHHTTCTTCSEEEECSCG
T ss_pred CcEEEEcCCHHHH-HHHHHHHhCccccccccCceEEEEEcCCHHHHHHHHHHcCCCcccCCHHHHhcCCCCCEEEEeCCh
Confidence 4799999999997 3322211 12222 235676 56788888885 47999999997
Q ss_pred ccHHHHHHhhccccCCCCEEE
Q psy6714 187 HIVPVALNDIKPVFNESNLLI 207 (303)
Q Consensus 187 ~~v~~VL~eI~~~L~~g~IVV 207 (303)
..=.+++.... ..|+-|+
T Consensus 86 ~~H~~~~~~al---~aGkhVl 103 (390)
T 4h3v_A 86 DSHAEIAIAAL---EAGKHVL 103 (390)
T ss_dssp GGHHHHHHHHH---HTTCEEE
T ss_pred HHHHHHHHHHH---HcCCCce
Confidence 76666654433 2455555
No 249
>3p7m_A Malate dehydrogenase; putative dehydrogenase, enzyme, structural genomics, center structural genomics of infectious diseases, csgid; 2.20A {Francisella tularensis}
Probab=95.81 E-value=0.022 Score=53.48 Aligned_cols=82 Identities=18% Similarity=0.236 Sum_probs=48.6
Q ss_pred CCcEEEEcCChhhHHHHHHHHh-----------hcHHH-------Hhh------CCCeEe-cChHHhhcCCCEEEEeeC-
Q psy6714 132 RSDKQIAGTTERGPGALIASLN-----------IVSKA-------TGT------MGAKIT-FDNKEVTLNSEVIILAVK- 185 (303)
Q Consensus 132 ~mkIgIIGlG~MG~~~La~al~-----------r~~e~-------l~e------~Gv~v~-~d~~eav~~ADIVILAVp- 185 (303)
+|||+|||+|.||. .++..+. ...++ +.. ....+. ++..+++++||+||++..
T Consensus 5 ~~kI~iiGaG~vG~-~~a~~l~~~~~~~v~l~Di~~~~~~g~a~dL~~~~~~~~~~~~v~~t~d~~a~~~aDvVIi~ag~ 83 (321)
T 3p7m_A 5 RKKITLVGAGNIGG-TLAHLALIKQLGDVVLFDIAQGMPNGKALDLLQTCPIEGVDFKVRGTNDYKDLENSDVVIVTAGV 83 (321)
T ss_dssp CCEEEEECCSHHHH-HHHHHHHHTTCCEEEEECSSSSHHHHHHHHHHTTHHHHTCCCCEEEESCGGGGTTCSEEEECCSC
T ss_pred CCEEEEECCCHHHH-HHHHHHHhCCCceEEEEeCChHHHHHHHHHHHhhhhhcCCCcEEEEcCCHHHHCCCCEEEEcCCc
Confidence 58999999999999 4554321 11111 111 133333 344578999999999973
Q ss_pred C---------------ccHHHHHHhhccccCCCCEEEEecCCCcH
Q psy6714 186 P---------------HIVPVALNDIKPVFNESNLLISVAGGVPI 215 (303)
Q Consensus 186 P---------------~~v~~VL~eI~~~L~~g~IVVSiaaGV~i 215 (303)
| ..+.++++.+..+- ++.+||-..++++.
T Consensus 84 p~k~G~~R~dl~~~N~~i~~~i~~~i~~~~-p~a~vivvtNPvd~ 127 (321)
T 3p7m_A 84 PRKPGMSRDDLLGINIKVMQTVGEGIKHNC-PNAFVICITNPLDI 127 (321)
T ss_dssp CCCTTCCHHHHHHHHHHHHHHHHHHHHHHC-TTCEEEECCSSHHH
T ss_pred CCCCCCCHHHHHHHhHHHHHHHHHHHHHHC-CCcEEEEecCchHH
Confidence 2 11334445565554 66666666676665
No 250
>2x0j_A Malate dehydrogenase; oxidoreductase, hyperthermophilic, tricarboxylic acid cycle; HET: ENA; 2.79A {Archaeoglobus fulgidus dsm 4304} PDB: 2x0i_A*
Probab=95.80 E-value=0.024 Score=52.72 Aligned_cols=82 Identities=15% Similarity=0.168 Sum_probs=47.6
Q ss_pred CcEEEEcCChhhHHHHHHHH------------hhcHHH-------Hh----hCC--CeE-ecChHHhhcCCCEEEEee--
Q psy6714 133 SDKQIAGTTERGPGALIASL------------NIVSKA-------TG----TMG--AKI-TFDNKEVTLNSEVIILAV-- 184 (303)
Q Consensus 133 mkIgIIGlG~MG~~~La~al------------~r~~e~-------l~----e~G--v~v-~~d~~eav~~ADIVILAV-- 184 (303)
|||+|||+|++|.+ ++..+ +...++ +. -.+ ..+ ..+..+.+++||+||++-
T Consensus 1 MKV~IiGaG~VG~~-~a~~l~~~~~~~el~L~Di~~~~~~G~a~DL~h~~~~~~~~~~i~~~~d~~~~~~aDvVvitAG~ 79 (294)
T 2x0j_A 1 MKLGFVGAGRVGST-SAFTCLLNLDVDEIALVDIAEDLAVGEAMDLAHAAAGIDKYPKIVGGADYSLLKGSEIIVVTAGL 79 (294)
T ss_dssp CEEEEECCSHHHHH-HHHHHHHHSCCSEEEEECSSHHHHHHHHHHHHHHHGGGTCCCEEEEESCGGGGTTCSEEEECCCC
T ss_pred CEEEEECcCHHHHH-HHHHHHhCCCCCEEEEEeCCCCcchhhhhhhhcccccCCCCCeEecCCCHHHhCCCCEEEEecCC
Confidence 89999999999984 55432 111111 11 111 222 233345689999999987
Q ss_pred --CCccH------------HHHHHhhccccCCCCEEEEecCCCcHH
Q psy6714 185 --KPHIV------------PVALNDIKPVFNESNLLISVAGGVPIK 216 (303)
Q Consensus 185 --pP~~v------------~~VL~eI~~~L~~g~IVVSiaaGV~ie 216 (303)
+|-.- .++.+++..+- ++.+|+-+.++++.-
T Consensus 80 prkpGmtR~dLl~~Na~I~~~i~~~i~~~~-p~aivlvvsNPvd~~ 124 (294)
T 2x0j_A 80 ARKPGMTRLDLAHKNAGIIKDIAKKIVENA-PESKILVVTNPMDVM 124 (294)
T ss_dssp CCCSSSCHHHHHHHHHHHHHHHHHHHHTTS-TTCEEEECSSSHHHH
T ss_pred CCCCCCchHHHHHHHHHHHHHHHHHHHhcC-CceEEEEecCcchhh
Confidence 34322 23344555543 566777788888763
No 251
>1oi7_A Succinyl-COA synthetase alpha chain; SCS, ligase, riken structural genomics/proteomics initiative, RSGI, structural genomics; 1.23A {Thermus thermophilus} SCOP: c.2.1.8 c.23.4.1
Probab=95.79 E-value=0.02 Score=52.83 Aligned_cols=82 Identities=15% Similarity=0.173 Sum_probs=57.2
Q ss_pred CCcEEEEcC-ChhhHHHHHHHHhhcH-H--------H--HhhCCCeEecChHHhhc--CCCEEEEeeCCccHHHHHHhhc
Q psy6714 132 RSDKQIAGT-TERGPGALIASLNIVS-K--------A--TGTMGAKITFDNKEVTL--NSEVIILAVKPHIVPVALNDIK 197 (303)
Q Consensus 132 ~mkIgIIGl-G~MG~~~La~al~r~~-e--------~--l~e~Gv~v~~d~~eav~--~ADIVILAVpP~~v~~VL~eI~ 197 (303)
.+||+|+|. |.||. .++..+.... + . -.-.|+.+..+..++.+ .+|++|+++||..+.+++++..
T Consensus 7 ~~~VaVvGasG~~G~-~~~~~l~~~g~~~v~~VnP~~~g~~i~G~~vy~sl~el~~~~~~Dv~Ii~vp~~~~~~~~~ea~ 85 (288)
T 1oi7_A 7 ETRVLVQGITGREGQ-FHTKQMLTYGTKIVAGVTPGKGGMEVLGVPVYDTVKEAVAHHEVDASIIFVPAPAAADAALEAA 85 (288)
T ss_dssp TCEEEEETTTSHHHH-HHHHHHHHHTCEEEEEECTTCTTCEETTEEEESSHHHHHHHSCCSEEEECCCHHHHHHHHHHHH
T ss_pred CCEEEEECCCCCHHH-HHHHHHHHcCCeEEEEECCCCCCceECCEEeeCCHHHHhhcCCCCEEEEecCHHHHHHHHHHHH
Confidence 578999997 99998 5554432210 0 0 01247777788888888 8999999999999999998875
Q ss_pred cccCCCCEEEEecCCCcHH
Q psy6714 198 PVFNESNLLISVAGGVPIK 216 (303)
Q Consensus 198 ~~L~~g~IVVSiaaGV~ie 216 (303)
.. .- +.+|-+..|++.+
T Consensus 86 ~~-Gi-~~vVi~t~G~~~~ 102 (288)
T 1oi7_A 86 HA-GI-PLIVLITEGIPTL 102 (288)
T ss_dssp HT-TC-SEEEECCSCCCHH
T ss_pred HC-CC-CEEEEECCCCCHH
Confidence 42 12 3344466788764
No 252
>1nvm_B Acetaldehyde dehydrogenase (acylating), 4-hydroxy-2-oxovalerate aldolase; sequestered tunnel, substrate channeling; HET: NAD; 1.70A {Pseudomonas SP} SCOP: c.2.1.3 d.81.1.1
Probab=95.73 E-value=0.011 Score=55.13 Aligned_cols=75 Identities=15% Similarity=0.134 Sum_probs=45.9
Q ss_pred CCcEEEEcCChhhHHHHHHHH-h------------hc-----HHHHhhCCCeEe-cChHHhhc-----CCCEEEEeeCCc
Q psy6714 132 RSDKQIAGTTERGPGALIASL-N------------IV-----SKATGTMGAKIT-FDNKEVTL-----NSEVIILAVKPH 187 (303)
Q Consensus 132 ~mkIgIIGlG~MG~~~La~al-~------------r~-----~e~l~e~Gv~v~-~d~~eav~-----~ADIVILAVpP~ 187 (303)
++||||||+|.||. .++..+ + +. .+..+++|+... .+.+++++ +.|+||+|+++.
T Consensus 4 ~irVaIIG~G~iG~-~~~~~l~~~~~~~elvav~d~~~~~~~~~~a~~~g~~~~~~~~e~ll~~~~~~~iDvV~~atp~~ 82 (312)
T 1nvm_B 4 KLKVAIIGSGNIGT-DLMIKVLRNAKYLEMGAMVGIDAASDGLARAQRMGVTTTYAGVEGLIKLPEFADIDFVFDATSAS 82 (312)
T ss_dssp CEEEEEECCSHHHH-HHHHHHHHHCSSEEEEEEECSCTTCHHHHHHHHTTCCEESSHHHHHHHSGGGGGEEEEEECSCHH
T ss_pred CCEEEEEcCcHHHH-HHHHHHHhhCcCeEEEEEEeCChhhhHHHHHHHcCCCcccCCHHHHHhccCCCCCcEEEECCChH
Confidence 57899999999999 444433 2 11 112236677643 34455543 579999999976
Q ss_pred cHHHHHHhhccccCCCCEEEE
Q psy6714 188 IVPVALNDIKPVFNESNLLIS 208 (303)
Q Consensus 188 ~v~~VL~eI~~~L~~g~IVVS 208 (303)
.-.+........ ++|+.||.
T Consensus 83 ~h~~~a~~al~a-~~Gk~Vi~ 102 (312)
T 1nvm_B 83 AHVQNEALLRQA-KPGIRLID 102 (312)
T ss_dssp HHHHHHHHHHHH-CTTCEEEE
T ss_pred HHHHHHHHHHHh-CCCCEEEE
Confidence 666665554321 12666664
No 253
>2d4a_B Malate dehydrogenase; archaea, hyperthermophIle, oxidoreductase; 2.87A {Aeropyrum pernix}
Probab=95.72 E-value=0.026 Score=52.49 Aligned_cols=79 Identities=13% Similarity=0.113 Sum_probs=48.1
Q ss_pred cEEEEcCChhhHHHHHHHH--h---------hcHHH-------Hh------hCCCeE--ecChHHhhcCCCEEEEeeCCc
Q psy6714 134 DKQIAGTTERGPGALIASL--N---------IVSKA-------TG------TMGAKI--TFDNKEVTLNSEVIILAVKPH 187 (303)
Q Consensus 134 kIgIIGlG~MG~~~La~al--~---------r~~e~-------l~------e~Gv~v--~~d~~eav~~ADIVILAVpP~ 187 (303)
||+|||.|.||.+ ++..+ + ...++ +. .....+ +.+. +++++||+||++....
T Consensus 1 KI~IiGaG~vG~~-~a~~l~~~~l~el~L~Di~~~~~~g~~~dl~~~~~~~~~~~~i~~t~d~-~a~~~aD~Vi~~ag~~ 78 (308)
T 2d4a_B 1 MITILGAGKVGMA-TAVMLMMRGYDDLLLIARTPGKPQGEALDLAHAAAELGVDIRISGSNSY-EDMRGSDIVLVTAGIG 78 (308)
T ss_dssp CEEEECCSHHHHH-HHHHHHHHTCSCEEEECSSTTHHHHHHHHHHHHHHHHTCCCCEEEESCG-GGGTTCSEEEECCSCC
T ss_pred CEEEECcCHHHHH-HHHHHHhCCCCEEEEEcCChhhHHHHHHHHHHhhhhcCCCeEEEECCCH-HHhCCCCEEEEeCCCC
Confidence 7999999999995 44321 1 01111 11 113333 3454 6799999999997533
Q ss_pred c----------------HHHHHHhhccccCCCCEEEEecCCCcH
Q psy6714 188 I----------------VPVALNDIKPVFNESNLLISVAGGVPI 215 (303)
Q Consensus 188 ~----------------v~~VL~eI~~~L~~g~IVVSiaaGV~i 215 (303)
. +.++++++..+. ++.+||-..++++.
T Consensus 79 ~k~G~~r~dl~~~n~~i~~~i~~~i~~~~-p~a~iiv~tNPv~~ 121 (308)
T 2d4a_B 79 RKPGMTREQLLEANANTMADLAEKIKAYA-KDAIVVITTNPVDA 121 (308)
T ss_dssp CCSSCCTHHHHHHHHHHHHHHHHHHHHHC-TTCEEEECCSSHHH
T ss_pred CCCCCcHHHHHHHHHHHHHHHHHHHHHHC-CCeEEEEeCCchHH
Confidence 2 667777777654 56555556676654
No 254
>2z2v_A Hypothetical protein PH1688; L-lysine dehydrogenase, oxidoreductase; HET: NAD; 2.44A {Pyrococcus horikoshii} PDB: 3a63_A* 3abi_A*
Probab=95.72 E-value=0.0074 Score=57.47 Aligned_cols=75 Identities=13% Similarity=0.130 Sum_probs=46.4
Q ss_pred CCcEEEEcCChhhHHHHHHHH---------hhcHHHHh---hCCCeEe------cChHHhhcCCCEEEEeeCCccHHHHH
Q psy6714 132 RSDKQIAGTTERGPGALIASL---------NIVSKATG---TMGAKIT------FDNKEVTLNSEVIILAVKPHIVPVAL 193 (303)
Q Consensus 132 ~mkIgIIGlG~MG~~~La~al---------~r~~e~l~---e~Gv~v~------~d~~eav~~ADIVILAVpP~~v~~VL 193 (303)
.+||+|||+|.||.. ++..+ +++.+++. +.+.... .+..++++++|+||.|+|+..-..++
T Consensus 16 ~~~v~IiGaG~iG~~-ia~~L~~~~~V~V~~R~~~~a~~la~~~~~~~~d~~~~~~l~~ll~~~DvVIn~~P~~~~~~v~ 94 (365)
T 2z2v_A 16 HMKVLILGAGNIGRA-IAWDLKDEFDVYIGDVNNENLEKVKEFATPLKVDASNFDKLVEVMKEFELVIGALPGFLGFKSI 94 (365)
T ss_dssp CCEEEEECCSHHHHH-HHHHHTTTSEEEEEESCHHHHHHHTTTSEEEECCTTCHHHHHHHHTTCSCEEECCCHHHHHHHH
T ss_pred CCeEEEEcCCHHHHH-HHHHHHcCCeEEEEECCHHHHHHHHhhCCeEEEecCCHHHHHHHHhCCCEEEECCChhhhHHHH
Confidence 578999999999994 54433 22333332 2221111 23456788999999999866545555
Q ss_pred HhhccccCCCCEEEEec
Q psy6714 194 NDIKPVFNESNLLISVA 210 (303)
Q Consensus 194 ~eI~~~L~~g~IVVSia 210 (303)
... +..++.+|+++
T Consensus 95 ~a~---l~~G~~~vD~s 108 (365)
T 2z2v_A 95 KAA---IKSKVDMVDVS 108 (365)
T ss_dssp HHH---HHTTCCEEECC
T ss_pred HHH---HHhCCeEEEcc
Confidence 432 34677777654
No 255
>1p9l_A Dihydrodipicolinate reductase; oxidoreductase, lysine biosynthesis, NADH binding specificity, TB structural genomics consortium; HET: NAD PDC PG4; 2.30A {Mycobacterium tuberculosis} SCOP: c.2.1.3 d.81.1.3 PDB: 1c3v_A* 1yl5_A 1yl7_A* 1yl6_A*
Probab=95.69 E-value=0.014 Score=52.87 Aligned_cols=76 Identities=14% Similarity=0.144 Sum_probs=47.9
Q ss_pred CcEEEEcC-ChhhHHHHHHHHhhcHHHHhhCCCeEe------cChHHhhc-CCCEEEEeeCCccHHHHHHhhccccCCCC
Q psy6714 133 SDKQIAGT-TERGPGALIASLNIVSKATGTMGAKIT------FDNKEVTL-NSEVIILAVKPHIVPVALNDIKPVFNESN 204 (303)
Q Consensus 133 mkIgIIGl-G~MG~~~La~al~r~~e~l~e~Gv~v~------~d~~eav~-~ADIVILAVpP~~v~~VL~eI~~~L~~g~ 204 (303)
|||+|+|+ |.||. .++..+... .++.+. .+..+++. .+|+||=++.|..+.+.+..... .+.
T Consensus 1 mkV~V~Ga~G~mG~-~i~~~~~~~------~~~elva~~d~~~dl~~~~~~~~DvvIDfT~p~a~~~~~~~a~~---~g~ 70 (245)
T 1p9l_A 1 MRVGVLGAKGKVGT-TMVRAVAAA------DDLTLSAELDAGDPLSLLTDGNTEVVIDFTHPDVVMGNLEFLID---NGI 70 (245)
T ss_dssp CEEEEETTTSHHHH-HHHHHHHHC------TTCEEEEEECTTCCTHHHHHTTCCEEEECSCTTTHHHHHHHHHH---TTC
T ss_pred CEEEEECCCCHHHH-HHHHHHHhC------CCCEEEEEEccCCCHHHHhccCCcEEEEccChHHHHHHHHHHHH---cCC
Confidence 68999995 99999 565443221 122211 34455554 79999988899998888766443 344
Q ss_pred EEEEecCCCcHHHH
Q psy6714 205 LLISVAGGVPIKNM 218 (303)
Q Consensus 205 IVVSiaaGV~ie~L 218 (303)
-+|....|.+.+.+
T Consensus 71 ~~VigTTG~~~e~~ 84 (245)
T 1p9l_A 71 HAVVGTTGFTAERF 84 (245)
T ss_dssp EEEECCCCCCHHHH
T ss_pred CEEEcCCCCCHHHH
Confidence 34444447776544
No 256
>2vt3_A REX, redox-sensing transcriptional repressor REX; transcriptional regulation, redox poise; HET: ATP; 2.0A {Bacillus subtilis} PDB: 2vt2_A*
Probab=95.68 E-value=0.0032 Score=56.07 Aligned_cols=66 Identities=18% Similarity=0.175 Sum_probs=40.8
Q ss_pred CCcEEEEcCChhhHHHHHHH--Hh-----------hcHHHHh--hCCCe--EecChHHhhcCCCEEEEeeCCccHHHHHH
Q psy6714 132 RSDKQIAGTTERGPGALIAS--LN-----------IVSKATG--TMGAK--ITFDNKEVTLNSEVIILAVKPHIVPVALN 194 (303)
Q Consensus 132 ~mkIgIIGlG~MG~~~La~a--l~-----------r~~e~l~--e~Gv~--v~~d~~eav~~ADIVILAVpP~~v~~VL~ 194 (303)
.++++|||+|.+|. .++.. .. .+.++.. -.|+. ...+..+++++.|+||+|+|.....+++.
T Consensus 85 ~~rV~IIGAG~~G~-~La~~~~~~~~g~~iVg~~D~dp~k~g~~i~gv~V~~~~dl~eli~~~D~ViIAvPs~~~~ei~~ 163 (215)
T 2vt3_A 85 MTDVILIGVGNLGT-AFLHYNFTKNNNTKISMAFDINESKIGTEVGGVPVYNLDDLEQHVKDESVAILTVPAVAAQSITD 163 (215)
T ss_dssp --CEEEECCSHHHH-HHHHCC------CCEEEEEESCTTTTTCEETTEEEEEGGGHHHHCSSCCEEEECSCHHHHHHHHH
T ss_pred CCEEEEEccCHHHH-HHHHHHhcccCCcEEEEEEeCCHHHHHhHhcCCeeechhhHHHHHHhCCEEEEecCchhHHHHHH
Confidence 46899999999999 56663 11 1111111 12333 33566677766699999999877777776
Q ss_pred hhcc
Q psy6714 195 DIKP 198 (303)
Q Consensus 195 eI~~ 198 (303)
.+..
T Consensus 164 ~l~~ 167 (215)
T 2vt3_A 164 RLVA 167 (215)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 6543
No 257
>3o9z_A Lipopolysaccaride biosynthesis protein WBPB; oxidoreductase, sugar biosynthesis, dehydrogenase; HET: NAD AKG; 1.45A {Thermus thermophilus} PDB: 3oa0_A*
Probab=95.66 E-value=0.031 Score=51.60 Aligned_cols=86 Identities=8% Similarity=0.041 Sum_probs=52.1
Q ss_pred CCCcEEEEcC-ChhhHHHHHHHHhhc-----------HH--HHh-hC-CCeEecChHHhh----------cCCCEEEEee
Q psy6714 131 NRSDKQIAGT-TERGPGALIASLNIV-----------SK--ATG-TM-GAKITFDNKEVT----------LNSEVIILAV 184 (303)
Q Consensus 131 ~~mkIgIIGl-G~MG~~~La~al~r~-----------~e--~l~-e~-Gv~v~~d~~eav----------~~ADIVILAV 184 (303)
.|+||||||+ |.||. ..+..+... .+ .+. .+ +.....+.++++ .+.|+|++|+
T Consensus 2 ~mirvgiIG~gG~i~~-~h~~~l~~~~~~lvav~d~~~~~~~~~~~~~~~~~~~~~~~ll~~~~~l~~~~~~vD~V~I~t 80 (312)
T 3o9z_A 2 HMTRFALTGLAGYIAP-RHLKAIKEVGGVLVASLDPATNVGLVDSFFPEAEFFTEPEAFEAYLEDLRDRGEGVDYLSIAS 80 (312)
T ss_dssp -CCEEEEECTTSSSHH-HHHHHHHHTTCEEEEEECSSCCCGGGGGTCTTCEEESCHHHHHHHHHHHHHTTCCCSEEEECS
T ss_pred CceEEEEECCChHHHH-HHHHHHHhCCCEEEEEEcCCHHHHHHHhhCCCCceeCCHHHHHHHhhhhcccCCCCcEEEECC
Confidence 4789999999 68998 344433221 11 121 22 456777877776 5789999999
Q ss_pred CCccHHHHHHhhccccCCCCEEEEecC--CCcHHHHHhh
Q psy6714 185 KPHIVPVALNDIKPVFNESNLLISVAG--GVPIKNMEQA 221 (303)
Q Consensus 185 pP~~v~~VL~eI~~~L~~g~IVVSiaa--GV~ie~L~~~ 221 (303)
|+..-.+++.... ..|+-|+. -. ..+.+..+++
T Consensus 81 P~~~H~~~~~~al---~aGkhVl~-EKPla~~~~ea~~l 115 (312)
T 3o9z_A 81 PNHLHYPQIRMAL---RLGANALS-EKPLVLWPEEIARL 115 (312)
T ss_dssp CGGGHHHHHHHHH---HTTCEEEE-CSSSCSCHHHHHHH
T ss_pred CchhhHHHHHHHH---HCCCeEEE-ECCCCCCHHHHHHH
Confidence 9887777765543 24555552 22 3344444443
No 258
>3oa2_A WBPB; oxidoreductase, sugar biosynthesis, dehydrogenase; HET: NAD; 1.50A {Pseudomonas aeruginosa}
Probab=95.63 E-value=0.032 Score=51.64 Aligned_cols=87 Identities=5% Similarity=-0.088 Sum_probs=52.2
Q ss_pred CCCcEEEEcC-ChhhHHHHHHHHhhc-----------H--HHHh-hC-CCeEecChHHhh-----------cCCCEEEEe
Q psy6714 131 NRSDKQIAGT-TERGPGALIASLNIV-----------S--KATG-TM-GAKITFDNKEVT-----------LNSEVIILA 183 (303)
Q Consensus 131 ~~mkIgIIGl-G~MG~~~La~al~r~-----------~--e~l~-e~-Gv~v~~d~~eav-----------~~ADIVILA 183 (303)
.|+||||||+ |.||. ..+..+... . ..+. .+ +.....+.++++ .+.|+|++|
T Consensus 2 ~mirvgiIG~gG~i~~-~h~~~l~~~~~~lvav~d~~~~~~~~~~~~~~~~~~~~~~~ll~~~~~l~~~~~~~vD~V~I~ 80 (318)
T 3oa2_A 2 HMKNFALIGAAGYIAP-RHMRAIKDTGNCLVSAYDINDSVGIIDSISPQSEFFTEFEFFLDHASNLKRDSATALDYVSIC 80 (318)
T ss_dssp -CCEEEEETTTSSSHH-HHHHHHHHTTCEEEEEECSSCCCGGGGGTCTTCEEESSHHHHHHHHHHHTTSTTTSCCEEEEC
T ss_pred CceEEEEECCCcHHHH-HHHHHHHhCCCEEEEEEcCCHHHHHHHhhCCCCcEECCHHHHHHhhhhhhhccCCCCcEEEEC
Confidence 3789999999 68997 444433221 1 1121 22 556777887776 468999999
Q ss_pred eCCccHHHHHHhhccccCCCCEEEEec-CCCcHHHHHhh
Q psy6714 184 VKPHIVPVALNDIKPVFNESNLLISVA-GGVPIKNMEQA 221 (303)
Q Consensus 184 VpP~~v~~VL~eI~~~L~~g~IVVSia-aGV~ie~L~~~ 221 (303)
+|+..-.+++..... .|+-|+.-. -..+.+..+++
T Consensus 81 tP~~~H~~~~~~al~---aGkhVl~EKPla~~~~ea~~l 116 (318)
T 3oa2_A 81 SPNYLHYPHIAAGLR---LGCDVICEKPLVPTPEMLDQL 116 (318)
T ss_dssp SCGGGHHHHHHHHHH---TTCEEEECSSCCSCHHHHHHH
T ss_pred CCcHHHHHHHHHHHH---CCCeEEEECCCcCCHHHHHHH
Confidence 998877776655432 455555221 13445544443
No 259
>2yyy_A Glyceraldehyde-3-phosphate dehydrogenase; glyceraldehyde 3-phosphate binding, alpha and beta proteins (A/B) class, MJ1146; HET: NAP; 1.85A {Methanocaldococcus jannaschii}
Probab=95.62 E-value=0.026 Score=53.55 Aligned_cols=38 Identities=8% Similarity=0.018 Sum_probs=24.7
Q ss_pred ChHHhhcCCCEEEEeeCCccHHHHHHhhccccCCCCEEEE
Q psy6714 169 DNKEVTLNSEVIILAVKPHIVPVALNDIKPVFNESNLLIS 208 (303)
Q Consensus 169 d~~eav~~ADIVILAVpP~~v~~VL~eI~~~L~~g~IVVS 208 (303)
+..++..++|+||.|++.....+..+ ..+++.|+.||+
T Consensus 74 ~~~~~~~~vDiV~eatg~~~s~~~a~--~~~l~aG~~VI~ 111 (343)
T 2yyy_A 74 TILDIIEDADIVVDGAPKKIGKQNLE--NIYKPHKVKAIL 111 (343)
T ss_dssp BGGGTGGGCSEEEECCCTTHHHHHHH--HTTTTTTCEEEE
T ss_pred chHHhccCCCEEEECCCccccHHHHH--HHHHHCCCEEEE
Confidence 44455578999999998776555554 224455665553
No 260
>4dio_A NAD(P) transhydrogenase subunit alpha PART 1; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.60A {Sinorhizobium meliloti}
Probab=95.61 E-value=0.0077 Score=58.62 Aligned_cols=79 Identities=14% Similarity=0.257 Sum_probs=46.4
Q ss_pred CCcEEEEcCChhhHHHHHHH---------Hhhc---HHHHhhCCCeEe-----------------------------cCh
Q psy6714 132 RSDKQIAGTTERGPGALIAS---------LNIV---SKATGTMGAKIT-----------------------------FDN 170 (303)
Q Consensus 132 ~mkIgIIGlG~MG~~~La~a---------l~r~---~e~l~e~Gv~v~-----------------------------~d~ 170 (303)
..||+|||+|.||..+...+ +++. .+.+.++|.... .+.
T Consensus 190 ~~kV~ViG~G~iG~~aa~~a~~lGa~V~v~D~~~~~l~~~~~~G~~~~~~~~~~~~d~~~~~~ya~e~s~~~~~~~~~~l 269 (405)
T 4dio_A 190 AAKIFVMGAGVAGLQAIATARRLGAVVSATDVRPAAKEQVASLGAKFIAVEDEEFKAAETAGGYAKEMSGEYQVKQAALV 269 (405)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSTTHHHHHHHTTCEECCCCC-----------------CHHHHHHHHHH
T ss_pred CCEEEEECCcHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHcCCceeecccccccccccccchhhhcchhhhhhhHhHH
Confidence 46899999999998432222 1122 234455666431 134
Q ss_pred HHhhcCCCEEEEeeC-Cc-cHHHHH-HhhccccCCCCEEEEec
Q psy6714 171 KEVTLNSEVIILAVK-PH-IVPVAL-NDIKPVFNESNLLISVA 210 (303)
Q Consensus 171 ~eav~~ADIVILAVp-P~-~v~~VL-~eI~~~L~~g~IVVSia 210 (303)
.++++++||||.|+. |. ....++ +++...++++.+||.++
T Consensus 270 ~e~l~~aDVVI~tvlipg~~ap~Lvt~emv~~Mk~GsVIVDvA 312 (405)
T 4dio_A 270 AEHIAKQDIVITTALIPGRPAPRLVTREMLDSMKPGSVVVDLA 312 (405)
T ss_dssp HHHHHTCSEEEECCCCSSSCCCCCBCHHHHTTSCTTCEEEETT
T ss_pred HHHhcCCCEEEECCcCCCCCCCEEecHHHHhcCCCCCEEEEEe
Confidence 567889999999962 21 111111 23333466889999765
No 261
>1s6y_A 6-phospho-beta-glucosidase; hydrolase, structural genomics, PSI, protein structure initi midwest center for structural genomics; 2.31A {Geobacillus stearothermophilus} SCOP: c.2.1.5 d.162.1.2
Probab=95.55 E-value=0.021 Score=56.13 Aligned_cols=64 Identities=8% Similarity=0.177 Sum_probs=45.0
Q ss_pred EecChHHhhcCCCEEEEeeCCcc------------------------------------HHHHHHhhccccCCCCEEEEe
Q psy6714 166 ITFDNKEVTLNSEVIILAVKPHI------------------------------------VPVALNDIKPVFNESNLLISV 209 (303)
Q Consensus 166 v~~d~~eav~~ADIVILAVpP~~------------------------------------v~~VL~eI~~~L~~g~IVVSi 209 (303)
.+.|..+++++||+||++++... +.++++.+..+- ++.+||-.
T Consensus 73 ~t~D~~eal~gAD~VVitagv~~~~~~~rd~~ip~~~g~~~~et~G~ggi~~~~rni~i~~~i~~~i~~~~-P~a~ii~~ 151 (450)
T 1s6y_A 73 LTLDRRRALDGADFVTTQFRVGGLEARAKDERIPLKYGVIGQETNGPGGLFKGLRTIPVILDIIRDMEELC-PDAWLINF 151 (450)
T ss_dssp EESCHHHHHTTCSEEEECCCTTHHHHHHHHHHTGGGGTCCCCSSSTHHHHHHHHHHHHHHHHHHHHHHHHC-TTCEEEEC
T ss_pred EeCCHHHHhCCCCEEEEcCCCCCCcchhhhhhhhhhcCcccccccccchHHHHhhhHHHHHHHHHHHHHHC-CCeEEEEe
Confidence 34566788999999999998532 456666676644 77888888
Q ss_pred cCCCcH--HHHHhhCCCCCceEEE
Q psy6714 210 AGGVPI--KNMEQALPKNSRIIRA 231 (303)
Q Consensus 210 aaGV~i--e~L~~~l~~~~~VVr~ 231 (303)
++++++ ..+.+..|. .+++.+
T Consensus 152 tNPvdivT~a~~k~~p~-~rViG~ 174 (450)
T 1s6y_A 152 TNPAGMVTEAVLRYTKQ-EKVVGL 174 (450)
T ss_dssp SSSHHHHHHHHHHHCCC-CCEEEC
T ss_pred CCcHHHHHHHHHHhCCC-CCEEEe
Confidence 888876 445566653 466655
No 262
>3gvi_A Malate dehydrogenase; NAD, oxidoreductase, tricarboxylic acid cycle, structural genomics; HET: ADP; 2.25A {Brucella melitensis biovar ABORTUS2308} PDB: 3gvh_A*
Probab=95.50 E-value=0.041 Score=51.68 Aligned_cols=81 Identities=17% Similarity=0.234 Sum_probs=48.6
Q ss_pred CCcEEEEcCChhhHHHHHHHH--h---------hcHHH-------Hh------hCCCeE--ecChHHhhcCCCEEEEeeC
Q psy6714 132 RSDKQIAGTTERGPGALIASL--N---------IVSKA-------TG------TMGAKI--TFDNKEVTLNSEVIILAVK 185 (303)
Q Consensus 132 ~mkIgIIGlG~MG~~~La~al--~---------r~~e~-------l~------e~Gv~v--~~d~~eav~~ADIVILAVp 185 (303)
+|||+|||+|.||.+ ++..+ + ...++ +. .....+ +.+. +++++||+||++..
T Consensus 7 ~~kI~viGaG~vG~~-~a~~l~~~~~~~v~L~Di~~~~~~g~~~dl~~~~~~~~~~~~v~~t~d~-~a~~~aDiVIiaag 84 (324)
T 3gvi_A 7 RNKIALIGSGMIGGT-LAHLAGLKELGDVVLFDIAEGTPQGKGLDIAESSPVDGFDAKFTGANDY-AAIEGADVVIVTAG 84 (324)
T ss_dssp CCEEEEECCSHHHHH-HHHHHHHTTCCEEEEECSSSSHHHHHHHHHHHHHHHHTCCCCEEEESSG-GGGTTCSEEEECCS
T ss_pred CCEEEEECCCHHHHH-HHHHHHhCCCCeEEEEeCCchhHHHHHHHHhchhhhcCCCCEEEEeCCH-HHHCCCCEEEEccC
Confidence 579999999999994 54332 1 11111 11 123333 3454 78999999999973
Q ss_pred -Cc---------------cHHHHHHhhccccCCCCEEEEecCCCcH
Q psy6714 186 -PH---------------IVPVALNDIKPVFNESNLLISVAGGVPI 215 (303)
Q Consensus 186 -P~---------------~v~~VL~eI~~~L~~g~IVVSiaaGV~i 215 (303)
|+ .+.++++.+..+- ++.+||-..+++++
T Consensus 85 ~p~k~G~~R~dl~~~N~~i~~~i~~~i~~~~-p~a~iivvtNPvd~ 129 (324)
T 3gvi_A 85 VPRKPGMSRDDLLGINLKVMEQVGAGIKKYA-PEAFVICITNPLDA 129 (324)
T ss_dssp CCCC-----CHHHHHHHHHHHHHHHHHHHHC-TTCEEEECCSSHHH
T ss_pred cCCCCCCCHHHHHHhhHHHHHHHHHHHHHHC-CCeEEEecCCCcHH
Confidence 21 1234445555544 66677767777765
No 263
>2ejw_A HDH, homoserine dehydrogenase; NAD-dependent, oxidoreductase; 1.70A {Thermus thermophilus}
Probab=95.44 E-value=0.016 Score=54.80 Aligned_cols=72 Identities=7% Similarity=0.036 Sum_probs=43.5
Q ss_pred CCcEEEEcCChhhHHHHHHHHhhcHHHHhhC------------------CC---eEecChHHhhcCCCEEEEeeCCcc-H
Q psy6714 132 RSDKQIAGTTERGPGALIASLNIVSKATGTM------------------GA---KITFDNKEVTLNSEVIILAVKPHI-V 189 (303)
Q Consensus 132 ~mkIgIIGlG~MG~~~La~al~r~~e~l~e~------------------Gv---~v~~d~~eav~~ADIVILAVpP~~-v 189 (303)
++||||||+|.||.. ++..+....+.+.+. ++ .+++|..+++ +.|+|+.|++... .
T Consensus 3 ~irvgIiG~G~VG~~-~~~~l~~~~~~l~~~g~~~~lvaV~d~~~~~~~~~~~~~~~~d~~~ll-~iDvVve~t~~~~~a 80 (332)
T 2ejw_A 3 ALKIALLGGGTVGSA-FYNLVLERAEELSAFGVVPRFLGVLVRDPRKPRAIPQELLRAEPFDLL-EADLVVEAMGGVEAP 80 (332)
T ss_dssp EEEEEEECCSHHHHH-HHHHHHHTGGGGGGGTEEEEEEEEECSCTTSCCSSCGGGEESSCCCCT-TCSEEEECCCCSHHH
T ss_pred eeEEEEEcCCHHHHH-HHHHHHhChhhHhhcCCCEEEEEEEECCHHHhhccCcccccCCHHHHh-CCCEEEECCCCcHHH
Confidence 478999999999994 665544333211111 11 2345666667 8999999998663 3
Q ss_pred HHHHHhhccccCCCCEEEE
Q psy6714 190 PVALNDIKPVFNESNLLIS 208 (303)
Q Consensus 190 ~~VL~eI~~~L~~g~IVVS 208 (303)
.+.+... +..|+-||+
T Consensus 81 ~~~~~~A---L~aGKhVVt 96 (332)
T 2ejw_A 81 LRLVLPA---LEAGIPLIT 96 (332)
T ss_dssp HHHHHHH---HHTTCCEEE
T ss_pred HHHHHHH---HHcCCeEEE
Confidence 4444332 335565665
No 264
>3n58_A Adenosylhomocysteinase; ssgcid, hydrolase, structural genomics, seattle structural G center for infectious disease; HET: ADN NAD; 2.39A {Brucella melitensis biovar abortus}
Probab=95.40 E-value=0.048 Score=53.91 Aligned_cols=76 Identities=9% Similarity=0.129 Sum_probs=50.3
Q ss_pred CCCcEEEEcCChhhHHHHHHHHh----------hcHH---HHhhCCCeEecChHHhhcCCCEEEEeeCCccH--HHHHHh
Q psy6714 131 NRSDKQIAGTTERGPGALIASLN----------IVSK---ATGTMGAKITFDNKEVTLNSEVIILAVKPHIV--PVALND 195 (303)
Q Consensus 131 ~~mkIgIIGlG~MG~~~La~al~----------r~~e---~l~e~Gv~v~~d~~eav~~ADIVILAVpP~~v--~~VL~e 195 (303)
..++++|||+|.||.+ ++..++ .+.. .....|+.+ .+..++++.+|+|++++....+ .+.+..
T Consensus 246 ~GKTVgVIG~G~IGr~-vA~~lrafGa~Viv~d~dp~~a~~A~~~G~~v-v~LeElL~~ADIVv~atgt~~lI~~e~l~~ 323 (464)
T 3n58_A 246 AGKVAVVCGYGDVGKG-SAQSLAGAGARVKVTEVDPICALQAAMDGFEV-VTLDDAASTADIVVTTTGNKDVITIDHMRK 323 (464)
T ss_dssp TTCEEEEECCSHHHHH-HHHHHHHTTCEEEEECSSHHHHHHHHHTTCEE-CCHHHHGGGCSEEEECCSSSSSBCHHHHHH
T ss_pred cCCEEEEECcCHHHHH-HHHHHHHCCCEEEEEeCCcchhhHHHhcCcee-ccHHHHHhhCCEEEECCCCccccCHHHHhc
Confidence 4678999999999994 554432 1221 223467765 4778899999999999854333 344444
Q ss_pred hccccCCCCEEEEecCC
Q psy6714 196 IKPVFNESNLLISVAGG 212 (303)
Q Consensus 196 I~~~L~~g~IVVSiaaG 212 (303)
++++.+||.+.-|
T Consensus 324 ----MK~GAILINvGRg 336 (464)
T 3n58_A 324 ----MKDMCIVGNIGHF 336 (464)
T ss_dssp ----SCTTEEEEECSSS
T ss_pred ----CCCCeEEEEcCCC
Confidence 4578888876533
No 265
>4aj2_A L-lactate dehydrogenase A chain; oxidoreductase-inhibitor complex, fragment-based LEAD genera inhibitors; HET: 52C; 1.75A {Rattus norvegicus} PDB: 4aj1_A* 4aje_A* 4ajh_A* 4aji_A* 4ajj_A* 4ajk_A* 4ajl_A* 4ajn_A* 4ajo_A* 4al4_A* 4aj4_A* 4ajp_A* 1i10_A* 3h3f_A* 9ldt_A* 9ldb_A* 1t2f_A* 1i0z_A* 5ldh_A* 1ldm_A* ...
Probab=95.38 E-value=0.023 Score=53.72 Aligned_cols=83 Identities=17% Similarity=0.228 Sum_probs=49.0
Q ss_pred cCCCcEEEEcCChhhHHHHHHHH------------hhcHHH-------Hhh---C--C--CeEecChHHhhcCCCEEEEe
Q psy6714 130 WNRSDKQIAGTTERGPGALIASL------------NIVSKA-------TGT---M--G--AKITFDNKEVTLNSEVIILA 183 (303)
Q Consensus 130 ~~~mkIgIIGlG~MG~~~La~al------------~r~~e~-------l~e---~--G--v~v~~d~~eav~~ADIVILA 183 (303)
...|||+|||+|.||.+ ++..+ +...++ +.. + . +....|. +.+++||+||++
T Consensus 17 ~~~~kV~ViGaG~vG~~-~a~~l~~~~~~~el~L~Di~~~~~~g~a~DL~~~~~~~~~~~i~~~~d~-~~~~~aDiVvi~ 94 (331)
T 4aj2_A 17 VPQNKITVVGVGAVGMA-CAISILMKDLADELALVDVIEDKLKGEMMDLQHGSLFLKTPKIVSSKDY-SVTANSKLVIIT 94 (331)
T ss_dssp CCSSEEEEECCSHHHHH-HHHHHHHTTCCSEEEEECSCHHHHHHHHHHHHHTGGGCSCCEEEECSSG-GGGTTEEEEEEC
T ss_pred CCCCEEEEECCCHHHHH-HHHHHHhCCCCceEEEEeCChHHHHHHHHhhhhhhhccCCCeEEEcCCH-HHhCCCCEEEEc
Confidence 34789999999999984 44321 111111 111 1 1 1223444 468999999999
Q ss_pred eC-Cc---------------cHHHHHHhhccccCCCCEEEEecCCCcH
Q psy6714 184 VK-PH---------------IVPVALNDIKPVFNESNLLISVAGGVPI 215 (303)
Q Consensus 184 Vp-P~---------------~v~~VL~eI~~~L~~g~IVVSiaaGV~i 215 (303)
.- |+ .+.++.+.+..+ .++.+|+-..+++++
T Consensus 95 aG~~~kpG~tR~dL~~~N~~I~~~i~~~i~~~-~p~a~vlvvtNPvdi 141 (331)
T 4aj2_A 95 AGARQQEGESRLNLVQRNVNIFKFIIPNVVKY-SPQCKLLIVSNPVDI 141 (331)
T ss_dssp CSCCCCTTCCGGGGHHHHHHHHHHHHHHHHHH-CTTCEEEECSSSHHH
T ss_pred cCCCCCCCccHHHHHHHHHHHHHHHHHHHHHH-CCCeEEEEecChHHH
Confidence 72 21 133445556665 466777777777765
No 266
>3pwk_A Aspartate-semialdehyde dehydrogenase; NADP binding, oxidoreductase-oxidoreductase I complex; HET: 25A L14; 1.50A {Streptococcus pneumoniae} PDB: 2gyy_A* 2gz2_A* 2gz3_A* 2gz1_A* 3pws_A* 3pyl_A 3pyx_A* 3pzb_A* 3q11_A* 3q1l_A
Probab=95.29 E-value=0.011 Score=56.84 Aligned_cols=78 Identities=9% Similarity=0.056 Sum_probs=47.8
Q ss_pred CCCcEEEEc-CChhhHHHHHHHHhhc--HH-H---H---hhCC-------C--eEecChHHhhcCCCEEEEeeCCccHHH
Q psy6714 131 NRSDKQIAG-TTERGPGALIASLNIV--SK-A---T---GTMG-------A--KITFDNKEVTLNSEVIILAVKPHIVPV 191 (303)
Q Consensus 131 ~~mkIgIIG-lG~MG~~~La~al~r~--~e-~---l---~e~G-------v--~v~~d~~eav~~ADIVILAVpP~~v~~ 191 (303)
|+|||+||| +|..|. .|...+... .. . + ...| . .+..-..+.++++|+||+|++...-.+
T Consensus 1 m~~kVaIvGATG~vG~-eLlrlL~~~~~p~~el~~~as~~saG~~~~~~~~~~~~~~~~~~~~~~~Dvvf~a~~~~~s~~ 79 (366)
T 3pwk_A 1 MGYTVAVVGATGAVGA-QMIKMLEESTLPIDKIRYLASARSAGKSLKFKDQDITIEETTETAFEGVDIALFSAGSSTSAK 79 (366)
T ss_dssp -CEEEEEETTTSHHHH-HHHHHHHTCCCCEEEEEEEECTTTTTCEEEETTEEEEEEECCTTTTTTCSEEEECSCHHHHHH
T ss_pred CCcEEEEECCCChHHH-HHHHHHhcCCCCcEEEEEEEccccCCCcceecCCCceEeeCCHHHhcCCCEEEECCChHhHHH
Confidence 357999999 999999 465544332 10 0 0 0111 1 121111234678999999998777777
Q ss_pred HHHhhccccCCCCEEEEecCC
Q psy6714 192 ALNDIKPVFNESNLLISVAGG 212 (303)
Q Consensus 192 VL~eI~~~L~~g~IVVSiaaG 212 (303)
....+. ..|..||+..+.
T Consensus 80 ~a~~~~---~~G~~vIDlSa~ 97 (366)
T 3pwk_A 80 YAPYAV---KAGVVVVDNTSY 97 (366)
T ss_dssp HHHHHH---HTTCEEEECSST
T ss_pred HHHHHH---HCCCEEEEcCCc
Confidence 776654 357788887764
No 267
>3gvp_A Adenosylhomocysteinase 3; protein CO-factor complex, hydrolase, NAD, one-carbon metabolism, phosphoprotein; HET: NAD; 2.25A {Homo sapiens} PDB: 3mtg_A*
Probab=95.16 E-value=0.018 Score=56.46 Aligned_cols=76 Identities=17% Similarity=0.243 Sum_probs=49.7
Q ss_pred CCCcEEEEcCChhhHHHHHHHHh----------hcHH---HHhhCCCeEecChHHhhcCCCEEEEeeC-CccHH-HHHHh
Q psy6714 131 NRSDKQIAGTTERGPGALIASLN----------IVSK---ATGTMGAKITFDNKEVTLNSEVIILAVK-PHIVP-VALND 195 (303)
Q Consensus 131 ~~mkIgIIGlG~MG~~~La~al~----------r~~e---~l~e~Gv~v~~d~~eav~~ADIVILAVp-P~~v~-~VL~e 195 (303)
..++++|+|+|.||. .++..++ .+.. .....|+.+ .+..++++.+|+||+|.- +..+. +.+..
T Consensus 219 ~GktV~ViG~G~IGk-~vA~~Lra~Ga~Viv~D~dp~ra~~A~~~G~~v-~~Leeal~~ADIVi~atgt~~lI~~e~l~~ 296 (435)
T 3gvp_A 219 GGKQVVVCGYGEVGK-GCCAALKAMGSIVYVTEIDPICALQACMDGFRL-VKLNEVIRQVDIVITCTGNKNVVTREHLDR 296 (435)
T ss_dssp TTCEEEEECCSHHHH-HHHHHHHHTTCEEEEECSCHHHHHHHHHTTCEE-CCHHHHTTTCSEEEECSSCSCSBCHHHHHH
T ss_pred cCCEEEEEeeCHHHH-HHHHHHHHCCCEEEEEeCChhhhHHHHHcCCEe-ccHHHHHhcCCEEEECCCCcccCCHHHHHh
Confidence 357899999999999 4554432 2221 233567654 578889999999999853 33332 44444
Q ss_pred hccccCCCCEEEEecCC
Q psy6714 196 IKPVFNESNLLISVAGG 212 (303)
Q Consensus 196 I~~~L~~g~IVVSiaaG 212 (303)
++++.+||.+.-|
T Consensus 297 ----MK~gailINvgrg 309 (435)
T 3gvp_A 297 ----MKNSCIVCNMGHS 309 (435)
T ss_dssp ----SCTTEEEEECSST
T ss_pred ----cCCCcEEEEecCC
Confidence 4577788876543
No 268
>2ozp_A N-acetyl-gamma-glutamyl-phosphate reductase; amino acid biosynthesis, structural genomics, riken structur genomics/proteomics initiative; 2.01A {Thermus thermophilus}
Probab=94.99 E-value=0.033 Score=52.67 Aligned_cols=147 Identities=11% Similarity=0.165 Sum_probs=78.1
Q ss_pred CCcEEEEc-CChhhHHHHHHHHhhcHH--------------HHhh----C-C---CeEecChHHhhcCCCEEEEeeCCcc
Q psy6714 132 RSDKQIAG-TTERGPGALIASLNIVSK--------------ATGT----M-G---AKITFDNKEVTLNSEVIILAVKPHI 188 (303)
Q Consensus 132 ~mkIgIIG-lG~MG~~~La~al~r~~e--------------~l~e----~-G---v~v~~d~~eav~~ADIVILAVpP~~ 188 (303)
||||+|+| +|.+|. .+.+.+..... ++.+ + | +.+ .+..+ +.++|+||+|++...
T Consensus 4 ~~kV~IiGAtG~iG~-~llr~L~~~p~~elv~v~s~~~~g~~~~~~~~~~~g~~~~~~-~~~~~-~~~vDvV~~a~g~~~ 80 (345)
T 2ozp_A 4 KKTLSIVGASGYAGG-EFLRLALSHPYLEVKQVTSRRFAGEPVHFVHPNLRGRTNLKF-VPPEK-LEPADILVLALPHGV 80 (345)
T ss_dssp CEEEEEETTTSHHHH-HHHHHHHTCTTEEEEEEBCSTTTTSBGGGTCGGGTTTCCCBC-BCGGG-CCCCSEEEECCCTTH
T ss_pred CCEEEEECCCCHHHH-HHHHHHHcCCCcEEEEEECchhhCchhHHhCchhcCcccccc-cchhH-hcCCCEEEEcCCcHH
Confidence 57999999 799999 56655322110 0110 1 1 111 22223 478999999999887
Q ss_pred HHHHHHhhccccCCCCEEEEecCCCc---HHHHHhhCCCC------CceEEEecCcH-HhhhCCcEEEEeCCCCCHHHHH
Q psy6714 189 VPVALNDIKPVFNESNLLISVAGGVP---IKNMEQALPKN------SRIIRAMPNTP-ALVRQGASVFVRGSSASDQDAQ 258 (303)
Q Consensus 189 v~~VL~eI~~~L~~g~IVVSiaaGV~---ie~L~~~l~~~------~~VVr~mPn~p-~~v~~G~til~~g~~~~~e~~e 258 (303)
-.+++..+. ..|..||+..+... .+.++++..+. ..++..+|-.. ..+... .+ +.++++......
T Consensus 81 s~~~a~~~~---~aG~~VId~Sa~~r~~~~~~y~~~y~~h~~~e~l~~~vygvpE~n~~~i~~~-~i-Ianp~C~tt~~~ 155 (345)
T 2ozp_A 81 FAREFDRYS---ALAPVLVDLSADFRLKDPELYRRYYGEHPRPDLLGRFVYAVPELYREALKGA-DW-IAGAGCNATATL 155 (345)
T ss_dssp HHHTHHHHH---TTCSEEEECSSTTSCSCHHHHHHHHCCCSSGGGTTSSEECCHHHHHHHHHTC-SE-EECCCHHHHHHH
T ss_pred HHHHHHHHH---HCCCEEEEcCccccCCChHHHHhhhccccchhhhccCcEeccccCHHHhhcC-CE-EeCCCcHHHHHH
Confidence 777776553 46777888876543 23344433310 13555655442 223332 23 334455554443
Q ss_pred -HHHHHHHhcCCcEEcCCCCchhhhhhccch
Q psy6714 259 -TVINLFKSVGTCEEVPEYLLDGITGLSGSG 288 (303)
Q Consensus 259 -~V~~Lfs~iG~~v~vdE~~~Da~tAlsGsg 288 (303)
.+..|.+..|.. .+.-.++...++||.|
T Consensus 156 ~~l~pL~~~~~i~--~~~i~v~t~~~~SGaG 184 (345)
T 2ozp_A 156 LGLYPLLKAGVLK--PTPIFVTLLISTSAGG 184 (345)
T ss_dssp HHHHHHHHTTCBC--SSCEEEEEEECSGGGC
T ss_pred HHHHHHHHhcCCC--CCeEEEEEEEEccccC
Confidence 355555554421 1133455555666554
No 269
>1t4b_A Aspartate-semialdehyde dehydrogenase; asadh, HOSR, lysine biosynthesis, NADP+ oxidoreductase (phosphorylating), domain movement; 1.60A {Escherichia coli} SCOP: c.2.1.3 d.81.1.1 PDB: 1t4d_A 1brm_A 1gl3_A* 1nwc_A 1ta4_A 1tb4_A 1ps8_A 1pr3_A 1oza_A 1pqu_A* 1pqp_A 1nwh_A* 1nx6_A* 1pu2_A* 1q2x_A*
Probab=94.91 E-value=0.044 Score=52.40 Aligned_cols=76 Identities=12% Similarity=0.122 Sum_probs=46.6
Q ss_pred CCcEEEEc-CChhhHHHHHH-HHhhcH-HH-----------------HhhCCCeEec--ChHHhhcCCCEEEEeeCCccH
Q psy6714 132 RSDKQIAG-TTERGPGALIA-SLNIVS-KA-----------------TGTMGAKITF--DNKEVTLNSEVIILAVKPHIV 189 (303)
Q Consensus 132 ~mkIgIIG-lG~MG~~~La~-al~r~~-e~-----------------l~e~Gv~v~~--d~~eav~~ADIVILAVpP~~v 189 (303)
||||+|+| +|.+|. .|.. .+.... .. +....+.+.. +.. ..+++|+||+|++...-
T Consensus 1 m~kVaIvGAtG~vG~-~llr~ll~~~~~~~v~i~~~~~~s~G~~v~~~~g~~i~~~~~~~~~-~~~~~DvVf~a~g~~~s 78 (367)
T 1t4b_A 1 MQNVGFIGWRGMVGS-VLMQRMVEERDFDAIRPVFFSTSQLGQAAPSFGGTTGTLQDAFDLE-ALKALDIIVTCQGGDYT 78 (367)
T ss_dssp CCEEEEESTTSHHHH-HHHHHHHHTTGGGGSEEEEEESSSTTSBCCGGGTCCCBCEETTCHH-HHHTCSEEEECSCHHHH
T ss_pred CcEEEEECCCCHHHH-HHHHHHHhcCCCCeEEEEEEEeCCCCCCccccCCCceEEEecCChH-HhcCCCEEEECCCchhH
Confidence 57999999 999999 5655 333221 10 1001122211 233 35789999999998777
Q ss_pred HHHHHhhccccCCC--CEEEEecCC
Q psy6714 190 PVALNDIKPVFNES--NLLISVAGG 212 (303)
Q Consensus 190 ~~VL~eI~~~L~~g--~IVVSiaaG 212 (303)
.+....+.. .| .+||+..+.
T Consensus 79 ~~~a~~~~~---~G~k~vVID~ss~ 100 (367)
T 1t4b_A 79 NEIYPKLRE---SGWQGYWIDAASS 100 (367)
T ss_dssp HHHHHHHHH---TTCCCEEEECSST
T ss_pred HHHHHHHHH---CCCCEEEEcCChh
Confidence 777766543 34 378877653
No 270
>1mld_A Malate dehydrogenase; oxidoreductase(NAD(A)-CHOH(D)); HET: CIT; 1.83A {Sus scrofa} SCOP: c.2.1.5 d.162.1.1 PDB: 2dfd_A*
Probab=94.88 E-value=0.05 Score=50.61 Aligned_cols=82 Identities=12% Similarity=0.114 Sum_probs=49.5
Q ss_pred CcEEEEcC-ChhhHHHHHHHHhh------------cH--HH---HhhC--C--CeEe---cChHHhhcCCCEEEEeeC--
Q psy6714 133 SDKQIAGT-TERGPGALIASLNI------------VS--KA---TGTM--G--AKIT---FDNKEVTLNSEVIILAVK-- 185 (303)
Q Consensus 133 mkIgIIGl-G~MG~~~La~al~r------------~~--e~---l~e~--G--v~v~---~d~~eav~~ADIVILAVp-- 185 (303)
|||+|||. |.+|.+ ++..+-. .. .. +... . +... ++..+++++||+||++..
T Consensus 1 mKI~IiGa~G~VG~~-la~~L~~~~~~~ev~L~Di~~~~~~a~dL~~~~~~~~l~~~~~t~d~~~a~~~aDvVvi~ag~~ 79 (314)
T 1mld_A 1 AKVAVLGASGGIGQP-LSLLLKNSPLVSRLTLYDIAHTPGVAADLSHIETRATVKGYLGPEQLPDCLKGCDVVVIPAGVP 79 (314)
T ss_dssp CEEEEETTTSTTHHH-HHHHHHTCTTCSEEEEEESSSHHHHHHHHTTSSSSCEEEEEESGGGHHHHHTTCSEEEECCSCC
T ss_pred CEEEEECCCChHHHH-HHHHHHhCCCCcEEEEEeCCccHHHHHHHhccCcCceEEEecCCCCHHHHhCCCCEEEECCCcC
Confidence 79999997 999995 5443211 11 11 1111 1 2221 356678999999999983
Q ss_pred --C------------ccHHHHHHhhccccCCCCEEEEecCCCcHH
Q psy6714 186 --P------------HIVPVALNDIKPVFNESNLLISVAGGVPIK 216 (303)
Q Consensus 186 --P------------~~v~~VL~eI~~~L~~g~IVVSiaaGV~ie 216 (303)
+ ..+.++++.+..+. ++.+||-..+++..-
T Consensus 80 ~~~g~~r~dl~~~n~~i~~~i~~~i~~~~-p~a~viv~sNPv~~~ 123 (314)
T 1mld_A 80 RKPGMTRDDLFNTNATIVATLTAACAQHC-PDAMICIISNPVNST 123 (314)
T ss_dssp CCTTCCGGGGHHHHHHHHHHHHHHHHHHC-TTSEEEECSSCHHHH
T ss_pred CCCCCcHHHHHHHHHHHHHHHHHHHHhhC-CCeEEEEECCCcchh
Confidence 2 23556666666654 555555577777754
No 271
>2r00_A Aspartate-semialdehyde dehydrogenase; conformational change, half-OF-sites-reactivity, protein evolution, sequence homology; HET: HTI; 2.03A {Vibrio cholerae} PDB: 2qz9_A* 2r00_C*
Probab=94.84 E-value=0.017 Score=54.43 Aligned_cols=78 Identities=9% Similarity=0.048 Sum_probs=46.8
Q ss_pred CCCcEEEEc-CChhhHHHHHHHHhhc--HH-H---H---hhC-------CC--eEecChHHhhcCCCEEEEeeCCccHHH
Q psy6714 131 NRSDKQIAG-TTERGPGALIASLNIV--SK-A---T---GTM-------GA--KITFDNKEVTLNSEVIILAVKPHIVPV 191 (303)
Q Consensus 131 ~~mkIgIIG-lG~MG~~~La~al~r~--~e-~---l---~e~-------Gv--~v~~d~~eav~~ADIVILAVpP~~v~~ 191 (303)
.||||+|+| +|.+|. .|...+... .. . + ... |. .+..-..+..+++|+||+|++...-.+
T Consensus 2 ~~~kV~I~GAtG~iG~-~llr~L~~~~~p~~elv~i~s~~~~G~~~~~~~~~i~~~~~~~~~~~~vDvVf~a~g~~~s~~ 80 (336)
T 2r00_A 2 QQFNVAIFGATGAVGE-TMLEVLQEREFPVDELFLLASERSEGKTYRFNGKTVRVQNVEEFDWSQVHIALFSAGGELSAK 80 (336)
T ss_dssp CCEEEEEETTTSHHHH-HHHHHHHHTTCCEEEEEEEECTTTTTCEEEETTEEEEEEEGGGCCGGGCSEEEECSCHHHHHH
T ss_pred CccEEEEECCCCHHHH-HHHHHHhcCCCCCEEEEEEECCCCCCCceeecCceeEEecCChHHhcCCCEEEECCCchHHHH
Confidence 368999999 999999 455543322 10 0 0 111 11 121111223468999999998777666
Q ss_pred HHHhhccccCCCCEEEEecCC
Q psy6714 192 ALNDIKPVFNESNLLISVAGG 212 (303)
Q Consensus 192 VL~eI~~~L~~g~IVVSiaaG 212 (303)
....+. ..|..||+..+.
T Consensus 81 ~a~~~~---~~G~~vId~s~~ 98 (336)
T 2r00_A 81 WAPIAA---EAGVVVIDNTSH 98 (336)
T ss_dssp HHHHHH---HTTCEEEECSST
T ss_pred HHHHHH---HcCCEEEEcCCc
Confidence 666543 356778877654
No 272
>1gpj_A Glutamyl-tRNA reductase; tRNA-dependent tetrapyrrole biosynthesis; HET: GMC CIT; 1.95A {Methanopyrus kandleri} SCOP: a.151.1.1 c.2.1.7 d.58.39.1
Probab=94.83 E-value=0.064 Score=51.43 Aligned_cols=81 Identities=20% Similarity=0.238 Sum_probs=47.1
Q ss_pred CCCcEEEEcCChhhHHHHHHHH-----------hhcHHH----HhhCCCeEe--cChHHhhcCCCEEEEeeCC-ccHH--
Q psy6714 131 NRSDKQIAGTTERGPGALIASL-----------NIVSKA----TGTMGAKIT--FDNKEVTLNSEVIILAVKP-HIVP-- 190 (303)
Q Consensus 131 ~~mkIgIIGlG~MG~~~La~al-----------~r~~e~----l~e~Gv~v~--~d~~eav~~ADIVILAVpP-~~v~-- 190 (303)
..++|+|||+|.||. .++..+ ++..++ ..++|+.+. .+..+++.++|+||.|++. ..+.
T Consensus 166 ~g~~VlIiGaG~iG~-~~a~~l~~~G~~~V~v~~r~~~ra~~la~~~g~~~~~~~~l~~~l~~aDvVi~at~~~~~~~~~ 244 (404)
T 1gpj_A 166 HDKTVLVVGAGEMGK-TVAKSLVDRGVRAVLVANRTYERAVELARDLGGEAVRFDELVDHLARSDVVVSATAAPHPVIHV 244 (404)
T ss_dssp TTCEEEEESCCHHHH-HHHHHHHHHCCSEEEEECSSHHHHHHHHHHHTCEECCGGGHHHHHHTCSEEEECCSSSSCCBCH
T ss_pred cCCEEEEEChHHHHH-HHHHHHHHCCCCEEEEEeCCHHHHHHHHHHcCCceecHHhHHHHhcCCCEEEEccCCCCceecH
Confidence 467899999999999 444332 222222 235576542 3556777899999999973 3332
Q ss_pred HHHHh-h-ccccCCCCEEEEecCC
Q psy6714 191 VALND-I-KPVFNESNLLISVAGG 212 (303)
Q Consensus 191 ~VL~e-I-~~~L~~g~IVVSiaaG 212 (303)
+.+.. + +..-.++.++|.+..+
T Consensus 245 ~~l~~~~lk~r~~~~~v~vdia~P 268 (404)
T 1gpj_A 245 DDVREALRKRDRRSPILIIDIANP 268 (404)
T ss_dssp HHHHHHHHHCSSCCCEEEEECCSS
T ss_pred HHHHHHHHhccCCCCEEEEEccCC
Confidence 34443 2 1111234456665543
No 273
>3mtj_A Homoserine dehydrogenase; rossmann-fold, PSI, MCSG, structural genomics, midwest cente structural genomics; 2.15A {Thiobacillus denitrificans}
Probab=94.77 E-value=0.068 Score=52.49 Aligned_cols=73 Identities=10% Similarity=0.109 Sum_probs=45.3
Q ss_pred CcEEEEcCChhhHHHHHHHHhh---------------------cHHHHhh--CCCeEecChHHhhc--CCCEEEEeeCC-
Q psy6714 133 SDKQIAGTTERGPGALIASLNI---------------------VSKATGT--MGAKITFDNKEVTL--NSEVIILAVKP- 186 (303)
Q Consensus 133 mkIgIIGlG~MG~~~La~al~r---------------------~~e~l~e--~Gv~v~~d~~eav~--~ADIVILAVpP- 186 (303)
+||||||+|.||.. ++..+.. ..++... .+..++.|..++++ +.|+|+.|+++
T Consensus 11 irIgIIG~G~VG~~-~~~~L~~~~~~l~~~~g~~i~lvaV~d~~~~~~~~~~~~~~~~~d~~ell~d~diDvVve~tp~~ 89 (444)
T 3mtj_A 11 IHVGLLGLGTVGGG-TLTVLRRNAEEITRRAGREIRVVRAAVRNLDKAEALAGGLPLTTNPFDVVDDPEIDIVVELIGGL 89 (444)
T ss_dssp EEEEEECCHHHHHH-HHHHHHHTHHHHHHHHSSCEEEEEEECSCHHHHHHHHTTCCEESCTHHHHTCTTCCEEEECCCSS
T ss_pred ccEEEECCCHHHHH-HHHHHHHhHHHHHHhcCCCEEEEEEEECCHHHhhhhcccCcccCCHHHHhcCCCCCEEEEcCCCc
Confidence 47999999999984 4433221 1111111 24556778888886 57999999985
Q ss_pred ccHHHHHHhhccccCCCCEEEEe
Q psy6714 187 HIVPVALNDIKPVFNESNLLISV 209 (303)
Q Consensus 187 ~~v~~VL~eI~~~L~~g~IVVSi 209 (303)
..-.+++... +..|+-||+-
T Consensus 90 ~~h~~~~~~A---L~aGKhVvte 109 (444)
T 3mtj_A 90 EPARELVMQA---IANGKHVVTA 109 (444)
T ss_dssp TTHHHHHHHH---HHTTCEEEEC
T ss_pred hHHHHHHHHH---HHcCCEEEEC
Confidence 5555554332 3356666644
No 274
>2ep5_A 350AA long hypothetical aspartate-semialdehyde dehydrogenase; oxidoreductase, structural genomics, NPPSFA; 2.40A {Sulfolobus tokodaii}
Probab=94.76 E-value=0.037 Score=52.32 Aligned_cols=76 Identities=12% Similarity=0.178 Sum_probs=46.5
Q ss_pred CCcEEEEc-CChhhHHHHHHHHhhcH----------H-----HHh-hC-------------CCeEec-ChHHhhcCCCEE
Q psy6714 132 RSDKQIAG-TTERGPGALIASLNIVS----------K-----ATG-TM-------------GAKITF-DNKEVTLNSEVI 180 (303)
Q Consensus 132 ~mkIgIIG-lG~MG~~~La~al~r~~----------e-----~l~-e~-------------Gv~v~~-d~~eav~~ADIV 180 (303)
++||+|+| +|.+|. .+...+.... . .+. .+ .+.+.. +..+ ++++|+|
T Consensus 4 ~~kV~IiGAtG~iG~-~llr~L~~~p~~elvai~~s~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~-~~~vDvV 81 (350)
T 2ep5_A 4 KIKVSLLGSTGMVGQ-KMVKMLAKHPYLELVKVSASPSKIGKKYKDAVKWIEQGDIPEEVQDLPIVSTNYED-HKDVDVV 81 (350)
T ss_dssp CEEEEEESCSSHHHH-HHHHHHTTCSSEEEEEEECCGGGTTSBHHHHCCCCSSSSCCHHHHTCBEECSSGGG-GTTCSEE
T ss_pred CcEEEEECcCCHHHH-HHHHHHHhCCCcEEEEEecChhhcCCCHHHhcCcccccccccCCceeEEeeCCHHH-hcCCCEE
Confidence 57999999 899999 5665432111 0 010 01 112221 3333 4789999
Q ss_pred EEeeCCccHHHHHHhhccccCCCCEEEEecCC
Q psy6714 181 ILAVKPHIVPVALNDIKPVFNESNLLISVAGG 212 (303)
Q Consensus 181 ILAVpP~~v~~VL~eI~~~L~~g~IVVSiaaG 212 (303)
|+|++...-.+++..+. ..|..||+..+.
T Consensus 82 f~atp~~~s~~~a~~~~---~aG~~VId~s~~ 110 (350)
T 2ep5_A 82 LSALPNELAESIELELV---KNGKIVVSNASP 110 (350)
T ss_dssp EECCCHHHHHHHHHHHH---HTTCEEEECSST
T ss_pred EECCChHHHHHHHHHHH---HCCCEEEECCcc
Confidence 99999777777766554 356678877653
No 275
>3hsk_A Aspartate-semialdehyde dehydrogenase; candida albicans NADP complex, amino-acid biosynthesis; HET: NAP; 2.20A {Candida albicans}
Probab=94.67 E-value=0.023 Score=54.73 Aligned_cols=38 Identities=11% Similarity=0.082 Sum_probs=29.7
Q ss_pred hhcCCCEEEEeeCCccHHHHHHhhccccCCCCEEEEecCCC
Q psy6714 173 VTLNSEVIILAVKPHIVPVALNDIKPVFNESNLLISVAGGV 213 (303)
Q Consensus 173 av~~ADIVILAVpP~~v~~VL~eI~~~L~~g~IVVSiaaGV 213 (303)
.++++|+||+|++.....++...+.. .|..||+..+..
T Consensus 90 ~~~~~Dvvf~alp~~~s~~~~~~~~~---~G~~VIDlSa~f 127 (381)
T 3hsk_A 90 NFLECDVVFSGLDADVAGDIEKSFVE---AGLAVVSNAKNY 127 (381)
T ss_dssp TGGGCSEEEECCCHHHHHHHHHHHHH---TTCEEEECCSTT
T ss_pred hcccCCEEEECCChhHHHHHHHHHHh---CCCEEEEcCCcc
Confidence 46789999999998888888777643 577888877654
No 276
>2fp4_A Succinyl-COA ligase [GDP-forming] alpha-chain, mitochondrial; active site phosphohistidine residue; HET: NEP GTP; 2.08A {Sus scrofa} SCOP: c.2.1.8 c.23.4.1 PDB: 2fpg_A* 2fpi_A* 2fpp_A* 1euc_A* 1eud_A*
Probab=94.60 E-value=0.12 Score=48.14 Aligned_cols=89 Identities=17% Similarity=0.253 Sum_probs=60.1
Q ss_pred CCcEEEE-cC-ChhhHHHHHHHHhhc---------HHHH--hhCCCeEecChHHhhc--CCCEEEEeeCCccHHHHHHhh
Q psy6714 132 RSDKQIA-GT-TERGPGALIASLNIV---------SKAT--GTMGAKITFDNKEVTL--NSEVIILAVKPHIVPVALNDI 196 (303)
Q Consensus 132 ~mkIgII-Gl-G~MG~~~La~al~r~---------~e~l--~e~Gv~v~~d~~eav~--~ADIVILAVpP~~v~~VL~eI 196 (303)
..+++|| |. |.+|. .++..+... +.+. .-.|+.+..+..|+.+ ..|+++++||+..+.++++++
T Consensus 13 ~~siaVV~Gasg~~G~-~~~~~l~~~G~~~v~~VnP~~~g~~i~G~~vy~sl~el~~~~~vD~avI~vP~~~~~~~~~e~ 91 (305)
T 2fp4_A 13 KNTKVICQGFTGKQGT-FHSQQALEYGTNLVGGTTPGKGGKTHLGLPVFNTVKEAKEQTGATASVIYVPPPFAAAAINEA 91 (305)
T ss_dssp TTCEEEEETTTSHHHH-HHHHHHHHHTCEEEEEECTTCTTCEETTEEEESSHHHHHHHHCCCEEEECCCHHHHHHHHHHH
T ss_pred CCcEEEEECCCCCHHH-HHHHHHHHCCCcEEEEeCCCcCcceECCeeeechHHHhhhcCCCCEEEEecCHHHHHHHHHHH
Confidence 4568999 97 99988 454443221 1110 1247777788888888 899999999999999999887
Q ss_pred ccccCCCCEEEEecCCCcHH---HHHhhCC
Q psy6714 197 KPVFNESNLLISVAGGVPIK---NMEQALP 223 (303)
Q Consensus 197 ~~~L~~g~IVVSiaaGV~ie---~L~~~l~ 223 (303)
... .- +.+|-+..|+..+ .+.+.+.
T Consensus 92 i~~-Gi-~~iv~~t~G~~~~~~~~l~~~a~ 119 (305)
T 2fp4_A 92 IDA-EV-PLVVCITEGIPQQDMVRVKHRLL 119 (305)
T ss_dssp HHT-TC-SEEEECCCCCCHHHHHHHHHHHT
T ss_pred HHC-CC-CEEEEECCCCChHHHHHHHHHHH
Confidence 542 12 3445577798765 3555443
No 277
>2yv1_A Succinyl-COA ligase [ADP-forming] subunit alpha; COA-binding domain, structural genomics, NPPSFA; 1.70A {Methanocaldococcus jannaschii}
Probab=94.58 E-value=0.072 Score=49.25 Aligned_cols=82 Identities=11% Similarity=0.158 Sum_probs=56.8
Q ss_pred CCcEEEEcC-ChhhHHHHHHHHhhcH---------HHH-h-hCCCeEecChHHhhc--CCCEEEEeeCCccHHHHHHhhc
Q psy6714 132 RSDKQIAGT-TERGPGALIASLNIVS---------KAT-G-TMGAKITFDNKEVTL--NSEVIILAVKPHIVPVALNDIK 197 (303)
Q Consensus 132 ~mkIgIIGl-G~MG~~~La~al~r~~---------e~l-~-e~Gv~v~~d~~eav~--~ADIVILAVpP~~v~~VL~eI~ 197 (303)
..++.|+|. |.||. .+...+.... .+. . -.|+.+..+..++.+ ++|+++++|||..+.+++.+..
T Consensus 13 ~~~v~V~Gasg~~G~-~~~~~l~~~g~~~V~~VnP~~~g~~i~G~~vy~sl~el~~~~~~Dv~ii~vp~~~~~~~v~ea~ 91 (294)
T 2yv1_A 13 NTKAIVQGITGRQGS-FHTKKMLECGTKIVGGVTPGKGGQNVHGVPVFDTVKEAVKETDANASVIFVPAPFAKDAVFEAI 91 (294)
T ss_dssp TCCEEEETTTSHHHH-HHHHHHHHTTCCEEEEECTTCTTCEETTEEEESSHHHHHHHHCCCEEEECCCHHHHHHHHHHHH
T ss_pred CCEEEEECCCCCHHH-HHHHHHHhCCCeEEEEeCCCCCCceECCEeeeCCHHHHhhcCCCCEEEEccCHHHHHHHHHHHH
Confidence 467899997 99998 4554432210 000 1 157778888888888 8999999999999999998876
Q ss_pred cccCCCCEEEEecCCCcHH
Q psy6714 198 PVFNESNLLISVAGGVPIK 216 (303)
Q Consensus 198 ~~L~~g~IVVSiaaGV~ie 216 (303)
.. .-+.+|-+..|++.+
T Consensus 92 ~~--Gi~~vVi~t~G~~~~ 108 (294)
T 2yv1_A 92 DA--GIELIVVITEHIPVH 108 (294)
T ss_dssp HT--TCSEEEECCSCCCHH
T ss_pred HC--CCCEEEEECCCCCHH
Confidence 42 123344467788764
No 278
>3u95_A Glycoside hydrolase, family 4; hydrolysis, cytosol; 2.00A {Thermotoga neapolitana} PDB: 1vjt_A*
Probab=94.35 E-value=0.13 Score=50.75 Aligned_cols=20 Identities=20% Similarity=0.054 Sum_probs=16.9
Q ss_pred eEecChHHhhcCCCEEEEee
Q psy6714 165 KITFDNKEVTLNSEVIILAV 184 (303)
Q Consensus 165 ~v~~d~~eav~~ADIVILAV 184 (303)
..++|..+++++||+||+++
T Consensus 65 ~~t~d~~eAl~gAD~Vi~~~ 84 (477)
T 3u95_A 65 VKTESLDEAIEGADFIINTA 84 (477)
T ss_dssp EEESCHHHHHTTCSEEEECC
T ss_pred EEeCCHHHHhCCCCEEEECc
Confidence 34677889999999999987
No 279
>3tl2_A Malate dehydrogenase; center for structural genomics of infectious diseases, csgid dehydrogenase, oxidoreductase, citric acid cycle; 1.70A {Bacillus anthracis}
Probab=94.34 E-value=0.13 Score=48.14 Aligned_cols=82 Identities=18% Similarity=0.226 Sum_probs=47.8
Q ss_pred CCcEEEEcCChhhHHHHHHHH-----------hhc--HHHH-------h------hCCCeEe-cChHHhhcCCCEEEEee
Q psy6714 132 RSDKQIAGTTERGPGALIASL-----------NIV--SKAT-------G------TMGAKIT-FDNKEVTLNSEVIILAV 184 (303)
Q Consensus 132 ~mkIgIIGlG~MG~~~La~al-----------~r~--~e~l-------~------e~Gv~v~-~d~~eav~~ADIVILAV 184 (303)
++||+|||.|.||.+ ++..+ +.. .+++ . .....+. ++..+.+++||+||++.
T Consensus 8 ~~kv~ViGaG~vG~~-ia~~l~~~g~~~v~l~D~~~~~~~~~g~a~dl~~~~~~~~~~~~i~~t~d~~a~~~aDvVIiaa 86 (315)
T 3tl2_A 8 RKKVSVIGAGFTGAT-TAFLLAQKELADVVLVDIPQLENPTKGKALDMLEASPVQGFDANIIGTSDYADTADSDVVVITA 86 (315)
T ss_dssp CCEEEEECCSHHHHH-HHHHHHHTTCCEEEEECCGGGHHHHHHHHHHHHHHHHHHTCCCCEEEESCGGGGTTCSEEEECC
T ss_pred CCEEEEECCCHHHHH-HHHHHHhCCCCeEEEEeccchHHHHHHhhhhHHHhhhhccCCCEEEEcCCHHHhCCCCEEEEeC
Confidence 468999999999994 54331 111 1111 0 1122232 33356789999999998
Q ss_pred C-Cc---------------cHHHHHHhhccccCCCCEEEEecCCCcH
Q psy6714 185 K-PH---------------IVPVALNDIKPVFNESNLLISVAGGVPI 215 (303)
Q Consensus 185 p-P~---------------~v~~VL~eI~~~L~~g~IVVSiaaGV~i 215 (303)
. |+ .+.++.+.+..+- ++.+|+-..+++++
T Consensus 87 g~p~kpg~~R~dl~~~N~~i~~~i~~~i~~~~-p~a~vlvvsNPvd~ 132 (315)
T 3tl2_A 87 GIARKPGMSRDDLVATNSKIMKSITRDIAKHS-PNAIIVVLTNPVDA 132 (315)
T ss_dssp SCCCCTTCCHHHHHHHHHHHHHHHHHHHHHHC-TTCEEEECCSSHHH
T ss_pred CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhC-CCeEEEECCChHHH
Confidence 2 21 2334455565543 66677767777665
No 280
>3tz6_A Aspartate-semialdehyde dehydrogenase; asadh, ASD, ASA, amino-acid biosynthesis, diaminopimelate biosynthesis, lysine biosynthesis; HET: SO4; 1.95A {Mycobacterium tuberculosis} PDB: 3vos_A* 3kub_A 3llg_A
Probab=94.17 E-value=0.027 Score=53.49 Aligned_cols=76 Identities=12% Similarity=0.113 Sum_probs=47.2
Q ss_pred CcEEEEc-CChhhHHHHHHHHhhc--HH-H---H---hhCCC---------eEecChHHhhcCCCEEEEeeCCccHHHHH
Q psy6714 133 SDKQIAG-TTERGPGALIASLNIV--SK-A---T---GTMGA---------KITFDNKEVTLNSEVIILAVKPHIVPVAL 193 (303)
Q Consensus 133 mkIgIIG-lG~MG~~~La~al~r~--~e-~---l---~e~Gv---------~v~~d~~eav~~ADIVILAVpP~~v~~VL 193 (303)
|||+||| +|..|.. |...+... .. . + ...|- .+.....+.++++|+||+|++...-.+..
T Consensus 2 ~~VaIvGatG~vG~e-l~~lL~~h~fp~~el~~~~s~~~aG~~~~~~~~~~~~~~~~~~~~~~~Dvvf~a~~~~~s~~~a 80 (344)
T 3tz6_A 2 LSIGIVGATGQVGQV-MRTLLDERDFPASAVRFFASARSQGRKLAFRGQEIEVEDAETADPSGLDIALFSAGSAMSKVQA 80 (344)
T ss_dssp EEEEEETTTSHHHHH-HHHHHHHTTCCEEEEEEEECTTTSSCEEEETTEEEEEEETTTSCCTTCSEEEECSCHHHHHHHH
T ss_pred CEEEEECCCChHHHH-HHHHHHhCCCCceEEEEEECcccCCCceeecCCceEEEeCCHHHhccCCEEEECCChHHHHHHH
Confidence 7899999 8999994 55443332 11 0 0 11121 11111123457899999999988777777
Q ss_pred HhhccccCCCCEEEEecCC
Q psy6714 194 NDIKPVFNESNLLISVAGG 212 (303)
Q Consensus 194 ~eI~~~L~~g~IVVSiaaG 212 (303)
..+.. .|..||+..+.
T Consensus 81 ~~~~~---~G~~vID~Sa~ 96 (344)
T 3tz6_A 81 PRFAA---AGVTVIDNSSA 96 (344)
T ss_dssp HHHHH---TTCEEEECSST
T ss_pred HHHHh---CCCEEEECCCc
Confidence 66543 57788887664
No 281
>2yv2_A Succinyl-COA synthetase alpha chain; COA-binding domain, ligase, structural genomics, NPPSFA; 2.20A {Aeropyrum pernix}
Probab=93.88 E-value=0.18 Score=46.59 Aligned_cols=82 Identities=15% Similarity=0.200 Sum_probs=55.4
Q ss_pred CCcEEEEcC-ChhhHHHHHHHHhhc-H--------HHH-h-hCCCeEecChHHhhc--C-CCEEEEeeCCccHHHHHHhh
Q psy6714 132 RSDKQIAGT-TERGPGALIASLNIV-S--------KAT-G-TMGAKITFDNKEVTL--N-SEVIILAVKPHIVPVALNDI 196 (303)
Q Consensus 132 ~mkIgIIGl-G~MG~~~La~al~r~-~--------e~l-~-e~Gv~v~~d~~eav~--~-ADIVILAVpP~~v~~VL~eI 196 (303)
..++.|+|. |.||. .+...+... . .+. . -.|+.+..+..++.+ . +|+++++|||..+.+++++.
T Consensus 13 ~~~vvV~Gasg~~G~-~~~~~l~~~g~~~v~~VnP~~~g~~i~G~~vy~sl~el~~~~~~~DvaIi~vp~~~~~~~v~ea 91 (297)
T 2yv2_A 13 ETRVLVQGITGREGS-FHAKAMLEYGTKVVAGVTPGKGGSEVHGVPVYDSVKEALAEHPEINTSIVFVPAPFAPDAVYEA 91 (297)
T ss_dssp TCEEEEETTTSHHHH-HHHHHHHHHTCEEEEEECTTCTTCEETTEEEESSHHHHHHHCTTCCEEEECCCGGGHHHHHHHH
T ss_pred CCEEEEECCCCCHHH-HHHHHHHhCCCcEEEEeCCCCCCceECCEeeeCCHHHHhhcCCCCCEEEEecCHHHHHHHHHHH
Confidence 457888897 99998 455443221 0 000 1 147777888888876 5 99999999999999999887
Q ss_pred ccccCCCCEEEEecCCCcHH
Q psy6714 197 KPVFNESNLLISVAGGVPIK 216 (303)
Q Consensus 197 ~~~L~~g~IVVSiaaGV~ie 216 (303)
... .-+.+|-+..|++.+
T Consensus 92 ~~~--Gi~~vVi~t~G~~~~ 109 (297)
T 2yv2_A 92 VDA--GIRLVVVITEGIPVH 109 (297)
T ss_dssp HHT--TCSEEEECCCCCCHH
T ss_pred HHC--CCCEEEEECCCCCHH
Confidence 652 123344466788764
No 282
>3ing_A Homoserine dehydrogenase; NP_394635.1, structural genomics, center for structural genomics, JCSG, protein structure INI PSI-2; HET: NDP; 1.95A {Thermoplasma acidophilum}
Probab=93.87 E-value=0.059 Score=50.69 Aligned_cols=41 Identities=5% Similarity=0.056 Sum_probs=24.8
Q ss_pred ChHHhhc--CCCEEEEeeCCcc-HHHHHHhhccccCCCCEEEEe
Q psy6714 169 DNKEVTL--NSEVIILAVKPHI-VPVALNDIKPVFNESNLLISV 209 (303)
Q Consensus 169 d~~eav~--~ADIVILAVpP~~-v~~VL~eI~~~L~~g~IVVSi 209 (303)
+..+++. +.|+|+.|+++.. .....+.+...+..|+-||+.
T Consensus 73 d~~e~l~~~~iDvVVe~T~~~~~~~pa~~~~~~aL~aGkhVVta 116 (325)
T 3ing_A 73 SGPEDLMGEAADLLVDCTPASRDGVREYSLYRMAFESGMNVVTA 116 (325)
T ss_dssp CSGGGGTTSCCSEEEECCCCCSSSHHHHHHHHHHHHTTCEEEEC
T ss_pred CHHHHhcCCCCCEEEECCCCccccchHHHHHHHHHHCCCeEEEc
Confidence 4455554 5899999998753 333333333345567777754
No 283
>2vhw_A Alanine dehydrogenase; NAD, secreted, oxidoreductase; HET: NAI; 2.0A {Mycobacterium tuberculosis} PDB: 2vhx_A* 2vhy_A 2vhz_A* 2vhv_A* 2voe_A 2voj_A*
Probab=93.80 E-value=0.063 Score=51.08 Aligned_cols=75 Identities=15% Similarity=0.229 Sum_probs=45.2
Q ss_pred CCCcEEEEcCChhhHHHHHHHH----------hhcHH---HHhh-CCCeE------ecChHHhhcCCCEEEEeeC-Ccc-
Q psy6714 131 NRSDKQIAGTTERGPGALIASL----------NIVSK---ATGT-MGAKI------TFDNKEVTLNSEVIILAVK-PHI- 188 (303)
Q Consensus 131 ~~mkIgIIGlG~MG~~~La~al----------~r~~e---~l~e-~Gv~v------~~d~~eav~~ADIVILAVp-P~~- 188 (303)
..++++|||+|.||.. ++..+ ++..+ .+.+ .|..+ ..+..+++..+|+||.|+. |..
T Consensus 167 ~g~~V~ViG~G~iG~~-~a~~a~~~Ga~V~~~d~~~~~l~~~~~~~g~~~~~~~~~~~~l~~~l~~aDvVi~~~~~p~~~ 245 (377)
T 2vhw_A 167 EPADVVVIGAGTAGYN-AARIANGMGATVTVLDINIDKLRQLDAEFCGRIHTRYSSAYELEGAVKRADLVIGAVLVPGAK 245 (377)
T ss_dssp CCCEEEEECCSHHHHH-HHHHHHHTTCEEEEEESCHHHHHHHHHHTTTSSEEEECCHHHHHHHHHHCSEEEECCCCTTSC
T ss_pred CCCEEEEECCCHHHHH-HHHHHHhCCCEEEEEeCCHHHHHHHHHhcCCeeEeccCCHHHHHHHHcCCCEEEECCCcCCCC
Confidence 3578999999999994 44332 12222 2333 45431 1234567788999999985 332
Q ss_pred -----HHHHHHhhccccCCCCEEEEec
Q psy6714 189 -----VPVALNDIKPVFNESNLLISVA 210 (303)
Q Consensus 189 -----v~~VL~eI~~~L~~g~IVVSia 210 (303)
..+.++ .++++.+||.+.
T Consensus 246 t~~li~~~~l~----~mk~g~~iV~va 268 (377)
T 2vhw_A 246 APKLVSNSLVA----HMKPGAVLVDIA 268 (377)
T ss_dssp CCCCBCHHHHT----TSCTTCEEEEGG
T ss_pred CcceecHHHHh----cCCCCcEEEEEe
Confidence 344443 345677788664
No 284
>3eag_A UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-ME diaminopimelate ligase; UDP-N-acetylmuramate:L-alanyl-G glutamyl-MESO-diaminopimelate ligase; 2.55A {Neisseria meningitidis MC58}
Probab=93.79 E-value=0.52 Score=43.56 Aligned_cols=54 Identities=19% Similarity=0.282 Sum_probs=34.5
Q ss_pred CCCcEEEEcCChhhHHHHHHHHhh---------------cHHHHhhCCCeEe--cChHHhh-cCCCEEEEee
Q psy6714 131 NRSDKQIAGTTERGPGALIASLNI---------------VSKATGTMGAKIT--FDNKEVT-LNSEVIILAV 184 (303)
Q Consensus 131 ~~mkIgIIGlG~MG~~~La~al~r---------------~~e~l~e~Gv~v~--~d~~eav-~~ADIVILAV 184 (303)
.+|||.|||+|.+|-+.++..+.+ ..+.+.+.|+.+. .+..++. .++|+||++-
T Consensus 3 ~~~~i~~iGiGg~Gms~~A~~L~~~G~~V~~~D~~~~~~~~~~L~~~gi~v~~g~~~~~l~~~~~d~vV~Sp 74 (326)
T 3eag_A 3 AMKHIHIIGIGGTFMGGLAAIAKEAGFEVSGCDAKMYPPMSTQLEALGIDVYEGFDAAQLDEFKADVYVIGN 74 (326)
T ss_dssp CCCEEEEESCCSHHHHHHHHHHHHTTCEEEEEESSCCTTHHHHHHHTTCEEEESCCGGGGGSCCCSEEEECT
T ss_pred CCcEEEEEEECHHHHHHHHHHHHhCCCEEEEEcCCCCcHHHHHHHhCCCEEECCCCHHHcCCCCCCEEEECC
Confidence 367899999999998436544311 1234667788764 3344444 4789888863
No 285
>1id1_A Putative potassium channel protein; RCK domain, E.coli potassium channel, BK channel, rossmann fold, membrane protein; 2.40A {Escherichia coli} SCOP: c.2.1.9
Probab=93.78 E-value=0.28 Score=39.73 Aligned_cols=83 Identities=10% Similarity=-0.023 Sum_probs=47.6
Q ss_pred CCcEEEEcCChhhHHHHHHHHh----------hc-HH---HHh---hCCCeEe-cC---h---HHh-hcCCCEEEEeeCC
Q psy6714 132 RSDKQIAGTTERGPGALIASLN----------IV-SK---ATG---TMGAKIT-FD---N---KEV-TLNSEVIILAVKP 186 (303)
Q Consensus 132 ~mkIgIIGlG~MG~~~La~al~----------r~-~e---~l~---e~Gv~v~-~d---~---~ea-v~~ADIVILAVpP 186 (303)
.++|.|+|.|.+|. .++..+. +. .+ .+. ..|+.+. .| . .++ ++++|+||++++.
T Consensus 3 ~~~vlI~G~G~vG~-~la~~L~~~g~~V~vid~~~~~~~~~~~~~~~~~~~~i~gd~~~~~~l~~a~i~~ad~vi~~~~~ 81 (153)
T 1id1_A 3 KDHFIVCGHSILAI-NTILQLNQRGQNVTVISNLPEDDIKQLEQRLGDNADVIPGDSNDSSVLKKAGIDRCRAILALSDN 81 (153)
T ss_dssp CSCEEEECCSHHHH-HHHHHHHHTTCCEEEEECCCHHHHHHHHHHHCTTCEEEESCTTSHHHHHHHTTTTCSEEEECSSC
T ss_pred CCcEEEECCCHHHH-HHHHHHHHCCCCEEEEECCChHHHHHHHHhhcCCCeEEEcCCCCHHHHHHcChhhCCEEEEecCC
Confidence 45799999999999 5665532 21 11 222 2355532 22 1 233 6789999999988
Q ss_pred ccHHHHHHhhccccCCCCEEEEecCCCcH
Q psy6714 187 HIVPVALNDIKPVFNESNLLISVAGGVPI 215 (303)
Q Consensus 187 ~~v~~VL~eI~~~L~~g~IVVSiaaGV~i 215 (303)
+.....+..+...+.+...||..+.....
T Consensus 82 d~~n~~~~~~a~~~~~~~~ii~~~~~~~~ 110 (153)
T 1id1_A 82 DADNAFVVLSAKDMSSDVKTVLAVSDSKN 110 (153)
T ss_dssp HHHHHHHHHHHHHHTSSSCEEEECSSGGG
T ss_pred hHHHHHHHHHHHHHCCCCEEEEEECCHHH
Confidence 77665554443334333334545544444
No 286
>1o6z_A MDH, malate dehydrogenase; halophilic, ION-binding, protein-solvent interaction, oxidoreductase; HET: NAD; 1.95A {Haloarcula marismortui} SCOP: c.2.1.5 d.162.1.1 PDB: 1gt2_A* 2x0r_A* 2j5k_A 2j5q_A 2j5r_A 1d3a_A 1hlp_A* 2hlp_A
Probab=93.78 E-value=0.16 Score=46.79 Aligned_cols=96 Identities=15% Similarity=0.261 Sum_probs=54.5
Q ss_pred CcEEEEc-CChhhHHHHHHHH------------hh--cHHHH-------hh-----CCCeEecChHHhhcCCCEEEEeeC
Q psy6714 133 SDKQIAG-TTERGPGALIASL------------NI--VSKAT-------GT-----MGAKITFDNKEVTLNSEVIILAVK 185 (303)
Q Consensus 133 mkIgIIG-lG~MG~~~La~al------------~r--~~e~l-------~e-----~Gv~v~~d~~eav~~ADIVILAVp 185 (303)
|||+|+| .|.+|.+ ++..+ +. ..+++ .. ..+.+..+..+++++||+||++..
T Consensus 1 mKI~IiGAaG~vG~~-l~~~L~~~~~~~el~L~Di~~~~~~~~~~~~dl~~~~~~~~~~~v~~~~~~a~~~aDvVi~~ag 79 (303)
T 1o6z_A 1 TKVSVVGAAGTVGAA-AGYNIALRDIADEVVFVDIPDKEDDTVGQAADTNHGIAYDSNTRVRQGGYEDTAGSDVVVITAG 79 (303)
T ss_dssp CEEEEETTTSHHHHH-HHHHHHHTTCCSEEEEECCGGGHHHHHHHHHHHHHHHTTTCCCEEEECCGGGGTTCSEEEECCC
T ss_pred CEEEEECCCChHHHH-HHHHHHhCCCCCEEEEEcCCCChhhHHHHHHHHHHHHhhCCCcEEEeCCHHHhCCCCEEEEcCC
Confidence 7999999 9999994 54331 12 22111 11 123443344677999999999983
Q ss_pred -Cc---------------cHHHHHHhhccccCCCCEEEEecCCCcHH--HHHhh--CCCCCceEEE
Q psy6714 186 -PH---------------IVPVALNDIKPVFNESNLLISVAGGVPIK--NMEQA--LPKNSRIIRA 231 (303)
Q Consensus 186 -P~---------------~v~~VL~eI~~~L~~g~IVVSiaaGV~ie--~L~~~--l~~~~~VVr~ 231 (303)
|. .+.++++.+..+ .++.+|+-..++++.- .+.+. ++. .+++.+
T Consensus 80 ~~~~~g~~r~dl~~~N~~i~~~i~~~i~~~-~p~~~viv~SNPv~~~~~~~~~~~~~p~-~rviG~ 143 (303)
T 1o6z_A 80 IPRQPGQTRIDLAGDNAPIMEDIQSSLDEH-NDDYISLTTSNPVDLLNRHLYEAGDRSR-EQVIGF 143 (303)
T ss_dssp CCCCTTCCHHHHHHHHHHHHHHHHHHHHTT-CSCCEEEECCSSHHHHHHHHHHHSSSCG-GGEEEC
T ss_pred CCCCCCCCHHHHHHHHHHHHHHHHHHHHHH-CCCcEEEEeCChHHHHHHHHHHHcCCCH-HHeeec
Confidence 21 234455555554 3555666566666652 33344 442 355555
No 287
>1u8f_O GAPDH, glyceraldehyde-3-phosphate dehydrogenase, liver; rossmann fold, oxidoreductase, mammalian GAPDH; HET: NAD; 1.75A {Homo sapiens} SCOP: c.2.1.3 d.81.1.1 PDB: 1znq_O* 1j0x_O* 3gpd_R* 1dss_G* 1crw_G* 1szj_G* 1ihx_A* 1ihy_A* 1gpd_G* 4gpd_1
Probab=93.75 E-value=0.1 Score=49.18 Aligned_cols=35 Identities=3% Similarity=-0.018 Sum_probs=23.7
Q ss_pred cCCCEEEEeeCCccHHHHHHhhccccCCCCEEEEecCC
Q psy6714 175 LNSEVIILAVKPHIVPVALNDIKPVFNESNLLISVAGG 212 (303)
Q Consensus 175 ~~ADIVILAVpP~~v~~VL~eI~~~L~~g~IVVSiaaG 212 (303)
.++|+||+|++...-.+.+..+ +..|..+|.+.++
T Consensus 90 ~~vDvV~eatg~~~~~e~a~~~---l~aGak~V~iSap 124 (335)
T 1u8f_O 90 AGAEYVVESTGVFTTMEKAGAH---LQGGAKRVIISAP 124 (335)
T ss_dssp TTCCEEEECSSSCCSHHHHGGG---GGGTCSEEEESSC
T ss_pred CCCCEEEECCCchhhHHHHHHH---HhCCCeEEEeccC
Confidence 4799999999988877776554 3345334445554
No 288
>1x13_A NAD(P) transhydrogenase subunit alpha; NAD(H)-binding domain, rossmann fold, oxidoreductase; 1.90A {Escherichia coli} PDB: 1x14_A* 1x15_A* 2bru_A*
Probab=93.72 E-value=0.04 Score=53.09 Aligned_cols=74 Identities=12% Similarity=0.254 Sum_probs=45.4
Q ss_pred CCcEEEEcCChhhHHHHHHHH----------hhcH---HHHhhCCCeEec---------------------------ChH
Q psy6714 132 RSDKQIAGTTERGPGALIASL----------NIVS---KATGTMGAKITF---------------------------DNK 171 (303)
Q Consensus 132 ~mkIgIIGlG~MG~~~La~al----------~r~~---e~l~e~Gv~v~~---------------------------d~~ 171 (303)
..+|+|||+|.||.. ++..+ ++.. +.+.++|..... +..
T Consensus 172 g~~V~ViGaG~iG~~-aa~~a~~~Ga~V~v~D~~~~~~~~~~~lGa~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~l~ 250 (401)
T 1x13_A 172 PAKVMVIGAGVAGLA-AIGAANSLGAIVRAFDTRPEVKEQVQSMGAEFLELDFKEEAGSGDGYAKVMSDAFIKAEMELFA 250 (401)
T ss_dssp CCEEEEECCSHHHHH-HHHHHHHTTCEEEEECSCGGGHHHHHHTTCEECCC--------CCHHHHHHSHHHHHHHHHHHH
T ss_pred CCEEEEECCCHHHHH-HHHHHHHCCCEEEEEcCCHHHHHHHHHcCCEEEEecccccccccccchhhccHHHHHHHHHHHH
Confidence 578999999999984 33221 1222 234567776432 234
Q ss_pred HhhcCCCEEEEee--C----CccH-HHHHHhhccccCCCCEEEEec
Q psy6714 172 EVTLNSEVIILAV--K----PHIV-PVALNDIKPVFNESNLLISVA 210 (303)
Q Consensus 172 eav~~ADIVILAV--p----P~~v-~~VL~eI~~~L~~g~IVVSia 210 (303)
+++..+|+||.|+ | |..+ .+.++. ++++.+||.+.
T Consensus 251 e~~~~aDvVI~~~~~pg~~ap~li~~~~l~~----mk~g~vIVdva 292 (401)
T 1x13_A 251 AQAKEVDIIVTTALIPGKPAPKLITREMVDS----MKAGSVIVDLA 292 (401)
T ss_dssp HHHHHCSEEEECCCCTTSCCCCCBCHHHHHT----SCTTCEEEETT
T ss_pred HHhCCCCEEEECCccCCCCCCeeeCHHHHhc----CCCCcEEEEEc
Confidence 6677899999994 3 1222 445544 44677888664
No 289
>3hhp_A Malate dehydrogenase; MDH, citric acid cycle, TCA cycle, NAD, oxidoreductase, tricarboxylic acid cycle; 1.45A {Escherichia coli k-12} PDB: 2pwz_A 2cmd_A* 1emd_A* 1ib6_A* 1ie3_A* 4e0b_A*
Probab=93.66 E-value=0.16 Score=47.33 Aligned_cols=82 Identities=13% Similarity=0.163 Sum_probs=47.8
Q ss_pred CcEEEEc-CChhhHHHHHHHHh-h------------cH---HH---HhhC--CCeEe----cChHHhhcCCCEEEEeeC-
Q psy6714 133 SDKQIAG-TTERGPGALIASLN-I------------VS---KA---TGTM--GAKIT----FDNKEVTLNSEVIILAVK- 185 (303)
Q Consensus 133 mkIgIIG-lG~MG~~~La~al~-r------------~~---e~---l~e~--Gv~v~----~d~~eav~~ADIVILAVp- 185 (303)
|||+||| +|.+|.. ++..+. . .. .. +... ...+. .+..+.+++||+||++..
T Consensus 1 mKV~IiGAaG~VG~~-~a~~L~~~~~~~~el~L~Di~~~~~G~a~Dl~~~~~~~~v~~~~~~~~~~~~~~aDivii~ag~ 79 (312)
T 3hhp_A 1 MKVAVLGAAGGIGQA-LALLLKTQLPSGSELSLYDIAPVTPGVAVDLSHIPTAVKIKGFSGEDATPALEGADVVLISAGV 79 (312)
T ss_dssp CEEEEETTTSHHHHH-HHHHHHHHSCTTEEEEEECSSTTHHHHHHHHHTSCSSEEEEEECSSCCHHHHTTCSEEEECCSC
T ss_pred CEEEEECCCCHHHHH-HHHHHHhCCCCCceEEEEecCCCchhHHHHhhCCCCCceEEEecCCCcHHHhCCCCEEEEeCCC
Confidence 7999999 9999994 443321 1 00 01 1111 12332 255678999999999972
Q ss_pred Cc---------------cHHHHHHhhccccCCCCEEEEecCCCcHH
Q psy6714 186 PH---------------IVPVALNDIKPVFNESNLLISVAGGVPIK 216 (303)
Q Consensus 186 P~---------------~v~~VL~eI~~~L~~g~IVVSiaaGV~ie 216 (303)
|+ .+.++.+.+..+ .++.+|+-..++++.-
T Consensus 80 ~rkpG~~R~dll~~N~~I~~~i~~~i~~~-~p~a~vlvvtNPvd~~ 124 (312)
T 3hhp_A 80 ARKPGMDRSDLFNVNAGIVKNLVQQVAKT-CPKACIGIITNPVNTT 124 (312)
T ss_dssp SCCTTCCHHHHHHHHHHHHHHHHHHHHHH-CTTSEEEECSSCHHHH
T ss_pred CCCCCCCHHHHHHHHHHHHHHHHHHHHHH-CCCcEEEEecCcchhH
Confidence 21 123334445554 3566777677777653
No 290
>2hjs_A USG-1 protein homolog; aspartate-semialdehyde dehydrogenase, probable hydrolase, PS aeruginosa, structurual genomics; 2.20A {Pseudomonas aeruginosa} SCOP: c.2.1.3 d.81.1.1
Probab=93.41 E-value=0.044 Score=51.70 Aligned_cols=77 Identities=13% Similarity=0.156 Sum_probs=44.6
Q ss_pred CCcEEEEc-CChhhHHHHHHHHh-h-cHH-HH------hhC-------CCeEe-cC-hHHhhcCCCEEEEeeCCccHHHH
Q psy6714 132 RSDKQIAG-TTERGPGALIASLN-I-VSK-AT------GTM-------GAKIT-FD-NKEVTLNSEVIILAVKPHIVPVA 192 (303)
Q Consensus 132 ~mkIgIIG-lG~MG~~~La~al~-r-~~e-~l------~e~-------Gv~v~-~d-~~eav~~ADIVILAVpP~~v~~V 192 (303)
+|||+|+| +|.+|. .|...+. + ... .+ ... |..+. .+ ..+.++++|+||+|++...-.+.
T Consensus 6 ~~kV~IiGAtG~iG~-~llr~L~~~~~~~~elv~i~s~~~~g~~~~~~g~~i~~~~~~~~~~~~~DvV~~a~g~~~s~~~ 84 (340)
T 2hjs_A 6 PLNVAVVGATGSVGE-ALVGLLDERDFPLHRLHLLASAESAGQRMGFAESSLRVGDVDSFDFSSVGLAFFAAAAEVSRAH 84 (340)
T ss_dssp CCCEEEETTTSHHHH-HHHHHHHHTTCCCSCEEEEECTTTTTCEEEETTEEEECEEGGGCCGGGCSEEEECSCHHHHHHH
T ss_pred CcEEEEECCCCHHHH-HHHHHHHhCCCCcEEEEEEecCCCCCCccccCCcceEEecCCHHHhcCCCEEEEcCCcHHHHHH
Confidence 47999999 899999 4555433 1 110 00 111 11111 11 12235689999999987776666
Q ss_pred HHhhccccCCCCEEEEecCC
Q psy6714 193 LNDIKPVFNESNLLISVAGG 212 (303)
Q Consensus 193 L~eI~~~L~~g~IVVSiaaG 212 (303)
+..+.. .|..+|.+.+.
T Consensus 85 a~~~~~---aG~kvId~Sa~ 101 (340)
T 2hjs_A 85 AERARA---AGCSVIDLSGA 101 (340)
T ss_dssp HHHHHH---TTCEEEETTCT
T ss_pred HHHHHH---CCCEEEEeCCC
Confidence 665543 45667766543
No 291
>1smk_A Malate dehydrogenase, glyoxysomal; tricarboxylic cycle, glyoxysome, NAD, glyoxylate bypass, oxidoreductase; HET: CIT; 2.50A {Citrullus lanatus} PDB: 1sev_A
Probab=93.40 E-value=0.1 Score=48.61 Aligned_cols=83 Identities=16% Similarity=0.176 Sum_probs=47.4
Q ss_pred CCCcEEEEc-CChhhHHHHHHHHhh------------cHH--H---HhhCCC--eE-----ecChHHhhcCCCEEEEeeC
Q psy6714 131 NRSDKQIAG-TTERGPGALIASLNI------------VSK--A---TGTMGA--KI-----TFDNKEVTLNSEVIILAVK 185 (303)
Q Consensus 131 ~~mkIgIIG-lG~MG~~~La~al~r------------~~e--~---l~e~Gv--~v-----~~d~~eav~~ADIVILAVp 185 (303)
++|||+||| +|.+|.. ++..+.. ..+ . +..... .+ .++..+++++||+||++..
T Consensus 7 ~~mKI~ViGAaG~VG~~-la~~L~~~g~~~ev~l~Di~~~~~~~~dL~~~~~~~~v~~~~~t~d~~~al~gaDvVi~~ag 85 (326)
T 1smk_A 7 PGFKVAILGAAGGIGQP-LAMLMKMNPLVSVLHLYDVVNAPGVTADISHMDTGAVVRGFLGQQQLEAALTGMDLIIVPAG 85 (326)
T ss_dssp -CEEEEEETTTSTTHHH-HHHHHHHCTTEEEEEEEESSSHHHHHHHHHTSCSSCEEEEEESHHHHHHHHTTCSEEEECCC
T ss_pred CCCEEEEECCCChHHHH-HHHHHHhCCCCCEEEEEeCCCcHhHHHHhhcccccceEEEEeCCCCHHHHcCCCCEEEEcCC
Confidence 468999999 8999994 5543211 111 1 222111 22 2245678999999999983
Q ss_pred -C---------------ccHHHHHHhhccccCCCCEEEEecCCCcH
Q psy6714 186 -P---------------HIVPVALNDIKPVFNESNLLISVAGGVPI 215 (303)
Q Consensus 186 -P---------------~~v~~VL~eI~~~L~~g~IVVSiaaGV~i 215 (303)
| ..+.++++.+..+- ++.+|+-..+++..
T Consensus 86 ~~~~~g~~r~dl~~~N~~~~~~i~~~i~~~~-p~~~viv~SNPv~~ 130 (326)
T 1smk_A 86 VPRKPGMTRDDLFKINAGIVKTLCEGIAKCC-PRAIVNLISNPVNS 130 (326)
T ss_dssp CCCCSSCCCSHHHHHHHHHHHHHHHHHHHHC-TTSEEEECCSSHHH
T ss_pred cCCCCCCCHHHHHHHHHHHHHHHHHHHHhhC-CCeEEEEECCchHH
Confidence 2 12445555555543 45555545666665
No 292
>3cps_A Glyceraldehyde 3-phosphate dehydrogenase; GAPDH, glycolysis, malaria, structural genomics; HET: NAD; 1.90A {Cryptosporidium parvum iowa II} PDB: 1vsv_A* 1vsu_A* 3chz_A 3cie_A* 3cif_A* 3sth_A*
Probab=93.40 E-value=0.042 Score=52.47 Aligned_cols=34 Identities=6% Similarity=0.035 Sum_probs=24.2
Q ss_pred cCCCEEEEeeCCccHHHHHHhhccccCCCC--EEEEecC
Q psy6714 175 LNSEVIILAVKPHIVPVALNDIKPVFNESN--LLISVAG 211 (303)
Q Consensus 175 ~~ADIVILAVpP~~v~~VL~eI~~~L~~g~--IVVSiaa 211 (303)
.++|+||.|++...-.+.+..+ +..|. +|||..+
T Consensus 104 ~~vDvV~eatg~~~s~e~a~~~---l~~GakkvVId~pa 139 (354)
T 3cps_A 104 SGAQIVCESTGVFTTEEKASLH---LKGGAKKVIISAPP 139 (354)
T ss_dssp HTCCEEEECSSSCCSHHHHGGG---GTTTCSEEEESSCC
T ss_pred CCCCEEEECCCchhhHHHHHHH---HHcCCcEEEEeCCC
Confidence 4799999999988777776554 33454 7776543
No 293
>3l9w_A Glutathione-regulated potassium-efflux system Pro linker, ancillary protein KEFF; potassium channel regulation, domains, antiport; HET: FMN AMP GSH; 1.75A {Escherichia coli} PDB: 3eyw_A* 3l9x_A*
Probab=93.14 E-value=0.25 Score=47.72 Aligned_cols=79 Identities=19% Similarity=0.098 Sum_probs=46.8
Q ss_pred CCcEEEEcCChhhHHHHHHHHhh----------cHH---HHhhCCCeE-ecCh--H----Hh-hcCCCEEEEeeCCccHH
Q psy6714 132 RSDKQIAGTTERGPGALIASLNI----------VSK---ATGTMGAKI-TFDN--K----EV-TLNSEVIILAVKPHIVP 190 (303)
Q Consensus 132 ~mkIgIIGlG~MG~~~La~al~r----------~~e---~l~e~Gv~v-~~d~--~----ea-v~~ADIVILAVpP~~v~ 190 (303)
.|+|.|+|+|.+|. .++..+.. +.+ .+.+.|+.+ ..|. . ++ ++++|+||++++.....
T Consensus 4 ~~~viIiG~Gr~G~-~va~~L~~~g~~vvvId~d~~~v~~~~~~g~~vi~GDat~~~~L~~agi~~A~~viv~~~~~~~n 82 (413)
T 3l9w_A 4 GMRVIIAGFGRFGQ-ITGRLLLSSGVKMVVLDHDPDHIETLRKFGMKVFYGDATRMDLLESAGAAKAEVLINAIDDPQTN 82 (413)
T ss_dssp CCSEEEECCSHHHH-HHHHHHHHTTCCEEEEECCHHHHHHHHHTTCCCEESCTTCHHHHHHTTTTTCSEEEECCSSHHHH
T ss_pred CCeEEEECCCHHHH-HHHHHHHHCCCCEEEEECCHHHHHHHHhCCCeEEEcCCCCHHHHHhcCCCccCEEEECCCChHHH
Confidence 57899999999999 57765432 222 345667753 2221 1 22 57899999999866554
Q ss_pred HHHHhhccccCCCCEEEEecC
Q psy6714 191 VALNDIKPVFNESNLLISVAG 211 (303)
Q Consensus 191 ~VL~eI~~~L~~g~IVVSiaa 211 (303)
-.+-.+...+.++.-||.-+.
T Consensus 83 ~~i~~~ar~~~p~~~Iiara~ 103 (413)
T 3l9w_A 83 LQLTEMVKEHFPHLQIIARAR 103 (413)
T ss_dssp HHHHHHHHHHCTTCEEEEEES
T ss_pred HHHHHHHHHhCCCCeEEEEEC
Confidence 443333333445533444433
No 294
>2dt5_A AT-rich DNA-binding protein; REX, NADH, NAD, rossmann fold, redox sensing, winged helix, themophilus; HET: NAD; 2.16A {Thermus thermophilus} SCOP: a.4.5.38 c.2.1.12 PDB: 1xcb_A* 3ikt_A* 3ikv_A 3il2_A*
Probab=93.07 E-value=0.035 Score=49.17 Aligned_cols=65 Identities=18% Similarity=0.113 Sum_probs=39.5
Q ss_pred CCcEEEEcCChhhHHHHHHHHhh------------cHHHHh--hCCCeE--ecChHHhhc-CCCEEEEeeCCccHHHHHH
Q psy6714 132 RSDKQIAGTTERGPGALIASLNI------------VSKATG--TMGAKI--TFDNKEVTL-NSEVIILAVKPHIVPVALN 194 (303)
Q Consensus 132 ~mkIgIIGlG~MG~~~La~al~r------------~~e~l~--e~Gv~v--~~d~~eav~-~ADIVILAVpP~~v~~VL~ 194 (303)
.++++|||+|.+|. .++..... +.++.. -.|+.+ ..+..++++ +.|+|++|+|.....+++.
T Consensus 80 ~~rV~IIGaG~~G~-~la~~~~~~~g~~iVg~~D~dp~k~g~~i~gv~V~~~~dl~ell~~~ID~ViIA~Ps~~~~ei~~ 158 (211)
T 2dt5_A 80 KWGLCIVGMGRLGS-ALADYPGFGESFELRGFFDVDPEKVGRPVRGGVIEHVDLLPQRVPGRIEIALLTVPREAAQKAAD 158 (211)
T ss_dssp CEEEEEECCSHHHH-HHHHCSCCCSSEEEEEEEESCTTTTTCEETTEEEEEGGGHHHHSTTTCCEEEECSCHHHHHHHHH
T ss_pred CCEEEEECccHHHH-HHHHhHhhcCCcEEEEEEeCCHHHHhhhhcCCeeecHHhHHHHHHcCCCEEEEeCCchhHHHHHH
Confidence 46899999999999 56653111 111111 123332 345566664 5899999998776666665
Q ss_pred hhc
Q psy6714 195 DIK 197 (303)
Q Consensus 195 eI~ 197 (303)
.+.
T Consensus 159 ~l~ 161 (211)
T 2dt5_A 159 LLV 161 (211)
T ss_dssp HHH
T ss_pred HHH
Confidence 553
No 295
>3keo_A Redox-sensing transcriptional repressor REX; DNA binding protein, winged helix, rossmann fold, NAD+; HET: NAD; 1.50A {Streptococcus agalactiae serogroup iiiorganism_taxid} PDB: 3keq_A* 3ket_A*
Probab=93.01 E-value=0.032 Score=49.68 Aligned_cols=65 Identities=17% Similarity=0.192 Sum_probs=40.9
Q ss_pred CCcEEEEcCChhhHHHHHHHH-------------hhcHH-HHhh---CCCeEe--cChHHhhc--CCCEEEEeeCCccHH
Q psy6714 132 RSDKQIAGTTERGPGALIASL-------------NIVSK-ATGT---MGAKIT--FDNKEVTL--NSEVIILAVKPHIVP 190 (303)
Q Consensus 132 ~mkIgIIGlG~MG~~~La~al-------------~r~~e-~l~e---~Gv~v~--~d~~eav~--~ADIVILAVpP~~v~ 190 (303)
+.+++|+|+|++|. +|+..+ +.+.+ +... .|+.+. .+..++++ +.|++|||+|.....
T Consensus 84 ~~~V~IvGaG~lG~-aLa~~~~~~~~g~~iVg~~D~dp~~kiG~~~i~GvpV~~~~dL~~~v~~~~Id~vIIAvPs~~aq 162 (212)
T 3keo_A 84 TTNVMLVGCGNIGR-ALLHYRFHDRNKMQISMAFDLDSNDLVGKTTEDGIPVYGISTINDHLIDSDIETAILTVPSTEAQ 162 (212)
T ss_dssp CEEEEEECCSHHHH-HHTTCCCCTTSSEEEEEEEECTTSTTTTCBCTTCCBEEEGGGHHHHC-CCSCCEEEECSCGGGHH
T ss_pred CCEEEEECcCHHHH-HHHHhhhcccCCeEEEEEEeCCchhccCceeECCeEEeCHHHHHHHHHHcCCCEEEEecCchhHH
Confidence 45799999999999 566541 11122 2211 355543 34556665 489999999887777
Q ss_pred HHHHhhc
Q psy6714 191 VALNDIK 197 (303)
Q Consensus 191 ~VL~eI~ 197 (303)
++++.+.
T Consensus 163 ~v~d~lv 169 (212)
T 3keo_A 163 EVADILV 169 (212)
T ss_dssp HHHHHHH
T ss_pred HHHHHHH
Confidence 7776554
No 296
>3c8m_A Homoserine dehydrogenase; structural genomics, APC89447, PS protein structure initiative, midwest center for structural genomics; HET: MSE; 1.90A {Thermoplasma volcanium GSS1} PDB: 3jsa_A*
Probab=92.95 E-value=0.23 Score=46.52 Aligned_cols=38 Identities=8% Similarity=0.154 Sum_probs=23.5
Q ss_pred ChHHhh-cCCCEEEEeeCCc----cHHHHHHhhccccCCCCEEEEe
Q psy6714 169 DNKEVT-LNSEVIILAVKPH----IVPVALNDIKPVFNESNLLISV 209 (303)
Q Consensus 169 d~~eav-~~ADIVILAVpP~----~v~~VL~eI~~~L~~g~IVVSi 209 (303)
|..+++ .+.|+|+.|+++. ...+++.. .+..|+-||+.
T Consensus 78 d~~~ll~~~iDvVv~~t~~~~~~~~~~~~~~~---AL~aGkhVvta 120 (331)
T 3c8m_A 78 SASEALARDFDIVVDATPASADGKKELAFYKE---TFENGKDVVTA 120 (331)
T ss_dssp CHHHHHHSSCSEEEECSCCCSSSHHHHHHHHH---HHHTTCEEEEC
T ss_pred CHHHHhCCCCCEEEECCCCCCccchHHHHHHH---HHHCCCeEEec
Confidence 566655 3689999999985 33333332 34467777753
No 297
>3uw3_A Aspartate-semialdehyde dehydrogenase; structural genomics, seattle structural genomics center for infectious disease (ssgcid); 1.55A {Burkholderia thailandensis}
Probab=92.92 E-value=0.12 Score=49.60 Aligned_cols=77 Identities=10% Similarity=0.098 Sum_probs=47.1
Q ss_pred CCCcEEEEc-CChhhHHHHHH-HHhhcH--H-------------HHhhC-C--CeEec-ChHHhhcCCCEEEEeeCCccH
Q psy6714 131 NRSDKQIAG-TTERGPGALIA-SLNIVS--K-------------ATGTM-G--AKITF-DNKEVTLNSEVIILAVKPHIV 189 (303)
Q Consensus 131 ~~mkIgIIG-lG~MG~~~La~-al~r~~--e-------------~l~e~-G--v~v~~-d~~eav~~ADIVILAVpP~~v 189 (303)
..||||||| +|..|. .|.. .+.... . .+.++ | ..+.. +..+.++++|+||+|++...-
T Consensus 3 ~~~~VaIvGATG~vG~-ellr~lL~~hp~~~~~l~~~ss~~aG~~~~~~~~~~~~v~~~~~~~~~~~vDvvf~a~~~~~s 81 (377)
T 3uw3_A 3 GSMNVGLVGWRGMVGS-VLMQRMQEEGDFDLIEPVFFSTSNAGGKAPSFAKNETTLKDATSIDDLKKCDVIITCQGGDYT 81 (377)
T ss_dssp CCCEEEEESTTSHHHH-HHHHHHHHTTGGGGSEEEEEESSCTTSBCCTTCCSCCBCEETTCHHHHHTCSEEEECSCHHHH
T ss_pred CCCEEEEECCCCHHHH-HHHHHHHhhCCCCceEEEEEechhcCCCHHHcCCCceEEEeCCChhHhcCCCEEEECCChHHH
Confidence 368999999 888898 4554 433222 1 01111 1 11211 122346789999999998887
Q ss_pred HHHHHhhccccCCC--CEEEEecC
Q psy6714 190 PVALNDIKPVFNES--NLLISVAG 211 (303)
Q Consensus 190 ~~VL~eI~~~L~~g--~IVVSiaa 211 (303)
.+++..+.. .| +.||+..+
T Consensus 82 ~~~~~~~~~---~G~k~~VID~ss 102 (377)
T 3uw3_A 82 NDVFPKLRA---AGWNGYWIDAAS 102 (377)
T ss_dssp HHHHHHHHH---TTCCSEEEECSS
T ss_pred HHHHHHHHH---CCCCEEEEeCCc
Confidence 877776543 44 37887765
No 298
>1l7d_A Nicotinamide nucleotide transhydrogenase, subunit alpha 1; transhydrogenase domain I, oxidoreductase; 1.81A {Rhodospirillum rubrum} SCOP: c.2.1.4 c.23.12.2 PDB: 1hzz_A* 1f8g_A 1l7e_A* 1u28_A* 1u2d_A* 1u2g_A* 1xlt_A* 2oo5_A* 2oor_A* 2frd_A* 2fsv_A* 1nm5_A* 2fr8_A* 1ptj_A*
Probab=92.83 E-value=0.092 Score=49.93 Aligned_cols=75 Identities=15% Similarity=0.270 Sum_probs=45.4
Q ss_pred CCCcEEEEcCChhhHHHHHHHH----------hhc---HHHHhhCCCeEe--cC--------------------------
Q psy6714 131 NRSDKQIAGTTERGPGALIASL----------NIV---SKATGTMGAKIT--FD-------------------------- 169 (303)
Q Consensus 131 ~~mkIgIIGlG~MG~~~La~al----------~r~---~e~l~e~Gv~v~--~d-------------------------- 169 (303)
...+++|||+|.+|.. ++..+ ++. .+.+.++|.... ..
T Consensus 171 ~g~~V~ViGaG~iG~~-aa~~a~~~Ga~V~~~d~~~~~~~~~~~~Ga~~~~i~~~~~~~~~~~~~~~~~~s~~~~~~~~~ 249 (384)
T 1l7d_A 171 PPARVLVFGVGVAGLQ-AIATAKRLGAVVMATDVRAATKEQVESLGGKFITVDDEAMKTAETAGGYAKEMGEEFRKKQAE 249 (384)
T ss_dssp CCCEEEEECCSHHHHH-HHHHHHHTTCEEEEECSCSTTHHHHHHTTCEECCC-----------------------CCHHH
T ss_pred CCCEEEEECCCHHHHH-HHHHHHHCCCEEEEEeCCHHHHHHHHHcCCeEEeecccccccccccccchhhcCHHHHhhhHH
Confidence 3578999999999984 33322 111 233456776543 11
Q ss_pred -hHHhhcCCCEEEEee--C----CccH-HHHHHhhccccCCCCEEEEec
Q psy6714 170 -NKEVTLNSEVIILAV--K----PHIV-PVALNDIKPVFNESNLLISVA 210 (303)
Q Consensus 170 -~~eav~~ADIVILAV--p----P~~v-~~VL~eI~~~L~~g~IVVSia 210 (303)
..+.++.+|+||.|+ | |..+ .+.++. ++++.+||.+.
T Consensus 250 ~l~~~~~~aDvVi~~~~~pg~~~~~li~~~~l~~----mk~g~vivdva 294 (384)
T 1l7d_A 250 AVLKELVKTDIAITTALIPGKPAPVLITEEMVTK----MKPGSVIIDLA 294 (384)
T ss_dssp HHHHHHTTCSEEEECCCCTTSCCCCCSCHHHHTT----SCTTCEEEETT
T ss_pred HHHHHhCCCCEEEECCccCCCCCCeeeCHHHHhc----CCCCCEEEEEe
Confidence 446678899999998 3 1222 444443 45677777664
No 299
>1ebf_A Homoserine dehydrogenase; dinucleotide, NAD, dimer, oxidoreductase; HET: NAD; 2.30A {Saccharomyces cerevisiae} SCOP: c.2.1.3 d.81.1.2 PDB: 1ebu_A* 1tve_A* 1q7g_A*
Probab=92.70 E-value=0.043 Score=52.20 Aligned_cols=22 Identities=14% Similarity=0.241 Sum_probs=17.0
Q ss_pred CCCcEEEEcCChhhHHHHHHHHh
Q psy6714 131 NRSDKQIAGTTERGPGALIASLN 153 (303)
Q Consensus 131 ~~mkIgIIGlG~MG~~~La~al~ 153 (303)
+++||||||+|.||.. ++..+.
T Consensus 3 k~i~vgIiG~G~VG~~-~~~~l~ 24 (358)
T 1ebf_A 3 KVVNVAVIGAGVVGSA-FLDQLL 24 (358)
T ss_dssp SEEEEEEECCSHHHHH-HHHHHH
T ss_pred ceEEEEEEecCHHHHH-HHHHHH
Confidence 3679999999999994 555443
No 300
>3pzr_A Aspartate-semialdehyde dehydrogenase; NADP, oxidoreductase-oxidoreductase inhibitor complex; HET: NAP; 1.75A {Vibrio cholerae} PDB: 1mc4_A 1mb4_A* 3q0e_A
Probab=92.62 E-value=0.13 Score=49.37 Aligned_cols=75 Identities=9% Similarity=0.058 Sum_probs=45.7
Q ss_pred CcEEEEc-CChhhHHHHHH-HHhhcH--H-------------HHhhC-C--CeEec-ChHHhhcCCCEEEEeeCCccHHH
Q psy6714 133 SDKQIAG-TTERGPGALIA-SLNIVS--K-------------ATGTM-G--AKITF-DNKEVTLNSEVIILAVKPHIVPV 191 (303)
Q Consensus 133 mkIgIIG-lG~MG~~~La~-al~r~~--e-------------~l~e~-G--v~v~~-d~~eav~~ADIVILAVpP~~v~~ 191 (303)
||||||| +|..|. .|.+ .+.... . .+.++ | ..+.. +..+.++++|+||+|++...-.+
T Consensus 1 ~~VaIvGATG~vG~-ellr~lL~~hp~~~~~l~~~ss~~aG~~~~~~~~~~~~~~~~~~~~~~~~~Dvvf~a~~~~~s~~ 79 (370)
T 3pzr_A 1 MRVGLVGWRGMVGS-VLMQRMVEERDFDLIEPVFFSTSQIGVPAPNFGKDAGMLHDAFDIESLKQLDAVITCQGGSYTEK 79 (370)
T ss_dssp CEEEEESCSSHHHH-HHHHHHHHTTGGGGSEEEEEESSSTTSBCCCSSSCCCBCEETTCHHHHTTCSEEEECSCHHHHHH
T ss_pred CEEEEECCCCHHHH-HHHHHHHhcCCCCceEEEEEeccccCcCHHHhCCCceEEEecCChhHhccCCEEEECCChHHHHH
Confidence 7899999 899999 4554 433222 1 01111 1 11111 12234678999999999887777
Q ss_pred HHHhhccccCCC--CEEEEecC
Q psy6714 192 ALNDIKPVFNES--NLLISVAG 211 (303)
Q Consensus 192 VL~eI~~~L~~g--~IVVSiaa 211 (303)
.+..+.. .| +.||+..+
T Consensus 80 ~~~~~~~---~G~k~~VID~ss 98 (370)
T 3pzr_A 80 VYPALRQ---AGWKGYWIDAAS 98 (370)
T ss_dssp HHHHHHH---TTCCCEEEECSS
T ss_pred HHHHHHH---CCCCEEEEeCCc
Confidence 7766543 34 47887765
No 301
>1up7_A 6-phospho-beta-glucosidase; hydrolase, family4 hydrolase, Na dependent; HET: G6P NAD; 2.4A {Thermotoga maritima} SCOP: c.2.1.5 d.162.1.2 PDB: 1up6_A* 1up4_A
Probab=92.44 E-value=0.48 Score=45.95 Aligned_cols=62 Identities=10% Similarity=0.180 Sum_probs=42.7
Q ss_pred ecChHHhhcCCCEEEEeeCCc------------------------------------cHHHHHHhhccccCCCCEEEEec
Q psy6714 167 TFDNKEVTLNSEVIILAVKPH------------------------------------IVPVALNDIKPVFNESNLLISVA 210 (303)
Q Consensus 167 ~~d~~eav~~ADIVILAVpP~------------------------------------~v~~VL~eI~~~L~~g~IVVSia 210 (303)
+.|..+++++||+||++.-.. .+.++++.+..+- +.++|..+
T Consensus 64 t~d~~~al~~AD~Viitagvg~~~~~~rd~~i~~k~glvgqeT~G~GGi~~~~rni~i~~~i~~~i~~~~--~A~lin~T 141 (417)
T 1up7_A 64 SDTFEGAVVDAKYVIFQFRPGGLKGRENDEGIPLKYGLIGQETTGVGGFSAALRAFPIVEEYVDTVRKTS--NATIVNFT 141 (417)
T ss_dssp CSSHHHHHTTCSEEEECCCTTHHHHHHHHHHGGGGGTCCCCSSSTHHHHHHHHHHHHHHHHHHHHHHHTT--CCEEEECS
T ss_pred eCCHHHHhCCCCEEEEcCCCCCCCccchhhhhhhhcCcccccccccchhHHhhccHHHHHHHHHHHHHHC--CEEEEEeC
Confidence 356668899999999999431 1456667777654 77888899
Q ss_pred CCCcH--HHHHhhCCCCCceEEE
Q psy6714 211 GGVPI--KNMEQALPKNSRIIRA 231 (303)
Q Consensus 211 aGV~i--e~L~~~l~~~~~VVr~ 231 (303)
+++.+ ..+.+..|. .+++.+
T Consensus 142 NPvdi~t~a~~k~~p~-~rviG~ 163 (417)
T 1up7_A 142 NPSGHITEFVRNYLEY-EKFIGL 163 (417)
T ss_dssp SSHHHHHHHHHHTTCC-SSEEEC
T ss_pred ChHHHHHHHHHHhCCC-CCEEEe
Confidence 98876 445555553 366655
No 302
>7mdh_A Protein (malate dehydrogenase); chloroplastic malate dehydrogenase (NADP+), activated by LIG chloroplastic malate dehydrogenase; 2.40A {Sorghum bicolor} SCOP: c.2.1.5 d.162.1.1 PDB: 1civ_A*
Probab=92.13 E-value=0.51 Score=45.33 Aligned_cols=52 Identities=17% Similarity=0.165 Sum_probs=32.0
Q ss_pred eEecChHHhhcCCCEEEEeeC-Cc---------------cHHHHHHhhccccCCCCEEEEecCCCcHH
Q psy6714 165 KITFDNKEVTLNSEVIILAVK-PH---------------IVPVALNDIKPVFNESNLLISVAGGVPIK 216 (303)
Q Consensus 165 ~v~~d~~eav~~ADIVILAVp-P~---------------~v~~VL~eI~~~L~~g~IVVSiaaGV~ie 216 (303)
.+..+..+.+++||+||++-- |+ .+.++.+.|..+-.++.+||-+.+++++-
T Consensus 97 ~i~~~~y~~~~daDvVVitag~prkpG~tR~DLl~~N~~I~k~i~~~i~~~a~p~~ivlVvsNPvD~~ 164 (375)
T 7mdh_A 97 SIGIDPYEVFEDVDWALLIGAKPRGPGMERAALLDINGQIFADQGKALNAVASKNVKVLVVGNPCNTN 164 (375)
T ss_dssp EEESCHHHHTTTCSEEEECCCCCCCTTCCHHHHHHHHHHHHHHHHHHHHHHSCTTCEEEECSSSHHHH
T ss_pred EEecCCHHHhCCCCEEEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhcCCCeEEEEecCchhHH
Confidence 455566788999999999752 22 12233334554434566777677777664
No 303
>3don_A Shikimate dehydrogenase; alpha-beta structure, rossman fold, amino-acid biosynthesis, amino acid biosynthesis, NADP, oxidoreductase; 2.10A {Staphylococcus epidermidis} PDB: 3doo_A*
Probab=91.88 E-value=0.071 Score=48.98 Aligned_cols=108 Identities=13% Similarity=0.048 Sum_probs=57.0
Q ss_pred CCcEEEEcCChhhHHHHHHHH-----------hhcHHHHhhC--CCeE--ecChHHhhcCCCEEEEeeCCccHHHHHHhh
Q psy6714 132 RSDKQIAGTTERGPGALIASL-----------NIVSKATGTM--GAKI--TFDNKEVTLNSEVIILAVKPHIVPVALNDI 196 (303)
Q Consensus 132 ~mkIgIIGlG~MG~~~La~al-----------~r~~e~l~e~--Gv~v--~~d~~eav~~ADIVILAVpP~~v~~VL~eI 196 (303)
.+++.|||+|.||.+ ++..+ +++.+++.++ ++.. ..+..+++.++|+||-|+|.....++-..+
T Consensus 117 ~k~vlvlGaGg~g~a-ia~~L~~~G~~~v~v~~R~~~~a~~la~~~~~~~~~~~~~~~~~aDiVInaTp~Gm~~~~~~~l 195 (277)
T 3don_A 117 DAYILILGAGGASKG-IANELYKIVRPTLTVANRTMSRFNNWSLNINKINLSHAESHLDEFDIIINTTPAGMNGNTDSVI 195 (277)
T ss_dssp GCCEEEECCSHHHHH-HHHHHHTTCCSCCEEECSCGGGGTTCCSCCEEECHHHHHHTGGGCSEEEECCC-------CCSS
T ss_pred CCEEEEECCcHHHHH-HHHHHHHCCCCEEEEEeCCHHHHHHHHHhcccccHhhHHHHhcCCCEEEECccCCCCCCCcCCC
Confidence 568999999999995 44332 2333333322 2222 234456678999999999754222210011
Q ss_pred -ccccCCCCEEEEec-CCCcHHHHHhhCCCCCceEEEecCcHHhhhCCc
Q psy6714 197 -KPVFNESNLLISVA-GGVPIKNMEQALPKNSRIIRAMPNTPALVRQGA 243 (303)
Q Consensus 197 -~~~L~~g~IVVSia-aGV~ie~L~~~l~~~~~VVr~mPn~p~~v~~G~ 243 (303)
...++++.+|+.++ ++....-++..-..+ ++++....+.+.|+.
T Consensus 196 ~~~~l~~~~~V~D~vY~P~~T~ll~~A~~~G---~~~~~Gl~MLv~Qa~ 241 (277)
T 3don_A 196 SLNRLASHTLVSDIVYNPYKTPILIEAEQRG---NPIYNGLDMFVHQGA 241 (277)
T ss_dssp CCTTCCSSCEEEESCCSSSSCHHHHHHHHTT---CCEECTHHHHHHHHH
T ss_pred CHHHcCCCCEEEEecCCCCCCHHHHHHHHCc---CEEeCCHHHHHHHHH
Confidence 23466788888765 333333333322212 345667777776653
No 304
>3e5r_O PP38, glyceraldehyde-3-phosphate dehydrogenase, cytosolic; GAPDH, RICE, oxidoreductase, cytoplasm, glycolysis, NAD; HET: NAD; 2.30A {Oryza sativa subsp} PDB: 3e6a_O
Probab=91.20 E-value=0.23 Score=46.82 Aligned_cols=32 Identities=9% Similarity=0.007 Sum_probs=22.6
Q ss_pred cCCCEEEEeeCCccHHHHHHhhccccCCCC--EEEEe
Q psy6714 175 LNSEVIILAVKPHIVPVALNDIKPVFNESN--LLISV 209 (303)
Q Consensus 175 ~~ADIVILAVpP~~v~~VL~eI~~~L~~g~--IVVSi 209 (303)
.++|+||.|++...-.+.+..+.. .|. +|||.
T Consensus 92 ~~vDvV~eaTg~~~~~e~a~~~l~---aGak~VVIs~ 125 (337)
T 3e5r_O 92 AGAEYVVESTGVFTDKEKAAAHLK---GGAKKVVISA 125 (337)
T ss_dssp HTCSEEEECSSSCCSHHHHTHHHH---TTCSEEEESS
T ss_pred cCCCEEEECCCchhhHHHHHHHHH---cCCCEEEEec
Confidence 479999999998877777655432 343 66654
No 305
>2aef_A Calcium-gated potassium channel MTHK; rossmann fold, helix-turn-helix, Ca2+ binding, flexible interface; 1.70A {Methanothermobacterthermautotrophicus} PDB: 2aej_A 2aem_A 3rbx_A 2ogu_A 2fy8_A 3kxd_A
Probab=90.56 E-value=0.59 Score=40.47 Aligned_cols=77 Identities=16% Similarity=0.072 Sum_probs=44.8
Q ss_pred CCcEEEEcCChhhHHHHHHHHhh---------cHH---HHhhCCCeEe-cC---hH---Hh-hcCCCEEEEeeCCccHHH
Q psy6714 132 RSDKQIAGTTERGPGALIASLNI---------VSK---ATGTMGAKIT-FD---NK---EV-TLNSEVIILAVKPHIVPV 191 (303)
Q Consensus 132 ~mkIgIIGlG~MG~~~La~al~r---------~~e---~l~e~Gv~v~-~d---~~---ea-v~~ADIVILAVpP~~v~~ 191 (303)
.++|.|+|+|.+|. .++..+.. ..+ .+. .|+.+. .| .. ++ ++++|+||++++.+...-
T Consensus 9 ~~~viI~G~G~~G~-~la~~L~~~g~v~vid~~~~~~~~~~-~~~~~i~gd~~~~~~l~~a~i~~ad~vi~~~~~d~~n~ 86 (234)
T 2aef_A 9 SRHVVICGWSESTL-ECLRELRGSEVFVLAEDENVRKKVLR-SGANFVHGDPTRVSDLEKANVRGARAVIVDLESDSETI 86 (234)
T ss_dssp -CEEEEESCCHHHH-HHHHHSTTSEEEEEESCGGGHHHHHH-TTCEEEESCTTCHHHHHHTTCTTCSEEEECCSCHHHHH
T ss_pred CCEEEEECCChHHH-HHHHHHHhCCeEEEEECCHHHHHHHh-cCCeEEEcCCCCHHHHHhcCcchhcEEEEcCCCcHHHH
Confidence 46899999999999 57766432 122 223 566532 22 11 22 678999999998775554
Q ss_pred HHHhhccccCCCCEEEEec
Q psy6714 192 ALNDIKPVFNESNLLISVA 210 (303)
Q Consensus 192 VL~eI~~~L~~g~IVVSia 210 (303)
.+..+...+.++.-||..+
T Consensus 87 ~~~~~a~~~~~~~~iia~~ 105 (234)
T 2aef_A 87 HCILGIRKIDESVRIIAEA 105 (234)
T ss_dssp HHHHHHHHHCSSSEEEEEC
T ss_pred HHHHHHHHHCCCCeEEEEE
Confidence 4433333344552344343
No 306
>2egg_A AROE, shikimate 5-dehydrogenase; dimer, X-RAY diffraction, structural genomics, NPPSFA; 2.25A {Geobacillus kaustophilus}
Probab=90.36 E-value=0.41 Score=43.90 Aligned_cols=107 Identities=14% Similarity=0.130 Sum_probs=56.5
Q ss_pred CCCcEEEEcCChhhHHHHHHHH-----------hhcHHHH----hhCCC---eEe--cChHHhhcCCCEEEEeeCCccHH
Q psy6714 131 NRSDKQIAGTTERGPGALIASL-----------NIVSKAT----GTMGA---KIT--FDNKEVTLNSEVIILAVKPHIVP 190 (303)
Q Consensus 131 ~~mkIgIIGlG~MG~~~La~al-----------~r~~e~l----~e~Gv---~v~--~d~~eav~~ADIVILAVpP~~v~ 190 (303)
..+++.|||+|.||.+ ++..+ +++.+++ .+++. .+. .+..+.+.++|+||.|++.....
T Consensus 140 ~~~~vlVlGaGg~g~a-ia~~L~~~G~~~V~v~nR~~~ka~~la~~~~~~~~~~~~~~~~~~~~~~aDivIn~t~~~~~~ 218 (297)
T 2egg_A 140 DGKRILVIGAGGGARG-IYFSLLSTAAERIDMANRTVEKAERLVREGDERRSAYFSLAEAETRLAEYDIIINTTSVGMHP 218 (297)
T ss_dssp TTCEEEEECCSHHHHH-HHHHHHTTTCSEEEEECSSHHHHHHHHHHSCSSSCCEECHHHHHHTGGGCSEEEECSCTTCSS
T ss_pred CCCEEEEECcHHHHHH-HHHHHHHCCCCEEEEEeCCHHHHHHHHHHhhhccCceeeHHHHHhhhccCCEEEECCCCCCCC
Confidence 3578999999999995 44332 2333332 23333 222 24456678999999999854321
Q ss_pred HH--HHhh-ccccCCCCEEEEecC-CCcHHHHHhhCCCCCceEEEecCcHHhhhCC
Q psy6714 191 VA--LNDI-KPVFNESNLLISVAG-GVPIKNMEQALPKNSRIIRAMPNTPALVRQG 242 (303)
Q Consensus 191 ~V--L~eI-~~~L~~g~IVVSiaa-GV~ie~L~~~l~~~~~VVr~mPn~p~~v~~G 242 (303)
.+ + .+ ...++++.+|+.+.- .....-++..-..+ +.+++...+.+.++
T Consensus 219 ~~~~~-~i~~~~l~~~~~v~D~~y~P~~T~ll~~A~~~G---~~~v~Gl~MLv~Qa 270 (297)
T 2egg_A 219 RVEVQ-PLSLERLRPGVIVSDIIYNPLETKWLKEAKARG---ARVQNGVGMLVYQG 270 (297)
T ss_dssp CCSCC-SSCCTTCCTTCEEEECCCSSSSCHHHHHHHHTT---CEEECSHHHHHHHH
T ss_pred CCCCC-CCCHHHcCCCCEEEEcCCCCCCCHHHHHHHHCc---CEEECCHHHHHHHH
Confidence 10 0 01 134567788886643 22222222211112 24566666665553
No 307
>2yv3_A Aspartate-semialdehyde dehydrogenase; aspartate pathway, structural genomics; 2.70A {Thermus thermophilus}
Probab=90.30 E-value=0.16 Score=47.66 Aligned_cols=74 Identities=9% Similarity=0.099 Sum_probs=44.5
Q ss_pred CcEEEEc-CChhhHHHHHHHHh-hcHH--------HHhhC-------C--CeEec-ChHHhhcCCCEEEEeeCCccHHHH
Q psy6714 133 SDKQIAG-TTERGPGALIASLN-IVSK--------ATGTM-------G--AKITF-DNKEVTLNSEVIILAVKPHIVPVA 192 (303)
Q Consensus 133 mkIgIIG-lG~MG~~~La~al~-r~~e--------~l~e~-------G--v~v~~-d~~eav~~ADIVILAVpP~~v~~V 192 (303)
|||+|+| +|.+|. .|.+.+. +..+ ..+.. | +.+.. ++.+ . ++|+||+|++...-.+.
T Consensus 1 mkVaI~GAtG~iG~-~llr~L~~~~~~~~~l~~~~s~~~~g~~l~~~g~~i~v~~~~~~~-~-~~DvV~~a~g~~~s~~~ 77 (331)
T 2yv3_A 1 MRVAVVGATGAVGR-EILKVLEARNFPLSELRLYASPRSAGVRLAFRGEEIPVEPLPEGP-L-PVDLVLASAGGGISRAK 77 (331)
T ss_dssp CCEEEETTTSHHHH-HHHHHHHHTTCCCSCCEEEECGGGSSCEEEETTEEEEEEECCSSC-C-CCSEEEECSHHHHHHHH
T ss_pred CEEEEECCCCHHHH-HHHHHHHhCCCCcEEEEEeeccccCCCEEEEcCceEEEEeCChhh-c-CCCEEEECCCccchHHH
Confidence 6899999 999999 4555432 1110 00111 1 11211 2223 3 79999999987777777
Q ss_pred HHhhccccCCCCEEEEecCC
Q psy6714 193 LNDIKPVFNESNLLISVAGG 212 (303)
Q Consensus 193 L~eI~~~L~~g~IVVSiaaG 212 (303)
...+. ..|..||+..+.
T Consensus 78 a~~~~---~~G~~vId~s~~ 94 (331)
T 2yv3_A 78 ALVWA---EGGALVVDNSSA 94 (331)
T ss_dssp HHHHH---HTTCEEEECSSS
T ss_pred HHHHH---HCCCEEEECCCc
Confidence 66553 356778877654
No 308
>2eez_A Alanine dehydrogenase; TTHA0216, structural genomic NPPSFA, national project on protein structural and function analyses; 2.71A {Thermus thermophilus}
Probab=90.26 E-value=0.38 Score=45.33 Aligned_cols=75 Identities=16% Similarity=0.199 Sum_probs=43.1
Q ss_pred cCCCcEEEEcCChhhHHHHHHHH----------hhcHHH---Hhh-CCCeE------ecChHHhhcCCCEEEEeeCCcc-
Q psy6714 130 WNRSDKQIAGTTERGPGALIASL----------NIVSKA---TGT-MGAKI------TFDNKEVTLNSEVIILAVKPHI- 188 (303)
Q Consensus 130 ~~~mkIgIIGlG~MG~~~La~al----------~r~~e~---l~e-~Gv~v------~~d~~eav~~ADIVILAVpP~~- 188 (303)
...++++|+|.|.||.. ++..+ ++..++ +.+ .|..+ ..+..++++.+|+||.|++...
T Consensus 164 l~~~~V~ViGaG~iG~~-~a~~l~~~Ga~V~~~d~~~~~~~~~~~~~g~~~~~~~~~~~~l~~~~~~~DvVi~~~g~~~~ 242 (369)
T 2eez_A 164 VAPASVVILGGGTVGTN-AAKIALGMGAQVTILDVNHKRLQYLDDVFGGRVITLTATEANIKKSVQHADLLIGAVLVPGA 242 (369)
T ss_dssp BCCCEEEEECCSHHHHH-HHHHHHHTTCEEEEEESCHHHHHHHHHHTTTSEEEEECCHHHHHHHHHHCSEEEECCC----
T ss_pred CCCCEEEEECCCHHHHH-HHHHHHhCCCEEEEEECCHHHHHHHHHhcCceEEEecCCHHHHHHHHhCCCEEEECCCCCcc
Confidence 34578999999999983 44332 122222 222 55432 1233466788999999997332
Q ss_pred ------HHHHHHhhccccCCCCEEEEe
Q psy6714 189 ------VPVALNDIKPVFNESNLLISV 209 (303)
Q Consensus 189 ------v~~VL~eI~~~L~~g~IVVSi 209 (303)
..+.++ .++++.+||.+
T Consensus 243 ~~~~li~~~~l~----~mk~gg~iV~v 265 (369)
T 2eez_A 243 KAPKLVTRDMLS----LMKEGAVIVDV 265 (369)
T ss_dssp ---CCSCHHHHT----TSCTTCEEEEC
T ss_pred ccchhHHHHHHH----hhcCCCEEEEE
Confidence 233333 34566677754
No 309
>3ngx_A Bifunctional protein fold; methylenetetrahydrofolate dehydrogenase/cyclohydrolase; 2.30A {Thermoplasma acidophilum} PDB: 3ngl_A
Probab=90.09 E-value=0.4 Score=44.27 Aligned_cols=66 Identities=17% Similarity=0.259 Sum_probs=43.9
Q ss_pred cCCCcEEEEcCCh-hhHHHHHHHHhhcHHHHhhCCCeE--e----cChHHhhcCCCEEEEeeC-CccHHHHHHhhccccC
Q psy6714 130 WNRSDKQIAGTTE-RGPGALIASLNIVSKATGTMGAKI--T----FDNKEVTLNSEVIILAVK-PHIVPVALNDIKPVFN 201 (303)
Q Consensus 130 ~~~mkIgIIGlG~-MG~~~La~al~r~~e~l~e~Gv~v--~----~d~~eav~~ADIVILAVp-P~~v~~VL~eI~~~L~ 201 (303)
+..+++.|||.|. +|.+ ++.. +...|+++ + .+..+.+++|||||.+++ |..+. .++++
T Consensus 148 l~Gk~vvVvG~s~iVG~p-lA~l-------L~~~gAtVtv~~~~t~~L~~~~~~ADIVI~Avg~p~~I~------~~~vk 213 (276)
T 3ngx_A 148 YHENTVTIVNRSPVVGRP-LSMM-------LLNRNYTVSVCHSKTKDIGSMTRSSKIVVVAVGRPGFLN------REMVT 213 (276)
T ss_dssp CCSCEEEEECCCTTTHHH-HHHH-------HHHTTCEEEEECTTCSCHHHHHHHSSEEEECSSCTTCBC------GGGCC
T ss_pred cCCCEEEEEcCChHHHHH-HHHH-------HHHCCCeEEEEeCCcccHHHhhccCCEEEECCCCCcccc------Hhhcc
Confidence 4467899999985 7885 3322 22335543 2 356788999999999996 43321 23467
Q ss_pred CCCEEEEe
Q psy6714 202 ESNLLISV 209 (303)
Q Consensus 202 ~g~IVVSi 209 (303)
+|.+||.+
T Consensus 214 ~GavVIDv 221 (276)
T 3ngx_A 214 PGSVVIDV 221 (276)
T ss_dssp TTCEEEEC
T ss_pred CCcEEEEe
Confidence 88888855
No 310
>2x5j_O E4PDH, D-erythrose-4-phosphate dehydrogenase; oxidoreductase, hydride transfer, aldehyde dehydrogenase, PY biosynthesis; 2.30A {Escherichia coli} PDB: 2xf8_A* 2x5k_O*
Probab=90.07 E-value=0.25 Score=46.65 Aligned_cols=34 Identities=9% Similarity=-0.050 Sum_probs=22.1
Q ss_pred CCCEEEEeeCCccHHHHHHhhccccCCCCEEEEec
Q psy6714 176 NSEVIILAVKPHIVPVALNDIKPVFNESNLLISVA 210 (303)
Q Consensus 176 ~ADIVILAVpP~~v~~VL~eI~~~L~~g~IVVSia 210 (303)
++|+||.|++.....+....+... ...++|||..
T Consensus 92 ~vDvV~e~tg~~~s~e~a~~~l~~-GakkVVId~~ 125 (339)
T 2x5j_O 92 GVDVVLDCTGVYGSREHGEAHIAA-GAKKVLFSHP 125 (339)
T ss_dssp TCSEEEECSSSCCSHHHHHHHHHT-TCSEEEESSC
T ss_pred CCCEEEECCCccccHHHHHHHHHc-CCCEEEEecc
Confidence 799999999977777666554331 1223566543
No 311
>3b1j_A Glyceraldehyde 3-phosphate dehydrogenase (NADP+); alpha/beta fold, oxidoreductase-protein binding complex; HET: NAD; 2.20A {Synechococcus elongatus} PDB: 3b1k_A* 3b20_A*
Probab=89.97 E-value=0.25 Score=46.74 Aligned_cols=21 Identities=5% Similarity=0.118 Sum_probs=16.3
Q ss_pred CCCEEEEeeCCccHHHHHHhh
Q psy6714 176 NSEVIILAVKPHIVPVALNDI 196 (303)
Q Consensus 176 ~ADIVILAVpP~~v~~VL~eI 196 (303)
++|+||.|++...-.+.....
T Consensus 91 ~vDvV~e~tg~~~s~e~a~~~ 111 (339)
T 3b1j_A 91 DIDLVIESTGVFVTAEGASKH 111 (339)
T ss_dssp TCCEEEECSSSCCBHHHHHHH
T ss_pred CCCEEEECCCccccHHHHHHH
Confidence 689999999877766666554
No 312
>1gad_O D-glyceraldehyde-3-phosphate dehydrogenase; oxidoreductase (aldehyde(D)-NAD+(A)); HET: NAD; 1.80A {Escherichia coli} SCOP: c.2.1.3 d.81.1.1 PDB: 1dc4_A* 1dc3_A 1dc6_A* 1dc5_A* 1s7c_A* 1gae_O* 2vyn_A* 2vyv_A*
Probab=89.94 E-value=0.4 Score=45.15 Aligned_cols=36 Identities=8% Similarity=0.063 Sum_probs=24.2
Q ss_pred cCCCEEEEeeCCccHHHHHHhhccccCCCCEEEEecCCC
Q psy6714 175 LNSEVIILAVKPHIVPVALNDIKPVFNESNLLISVAGGV 213 (303)
Q Consensus 175 ~~ADIVILAVpP~~v~~VL~eI~~~L~~g~IVVSiaaGV 213 (303)
.++|+||.|++...-.+....+. ..|..+|.+.+..
T Consensus 87 ~~vDvVf~atg~~~s~e~a~~~l---~~GakvVdlSa~~ 122 (330)
T 1gad_O 87 VGVDVVAEATGLFLTDETARKHI---TAGAKKVVMTGPS 122 (330)
T ss_dssp HTCSEEEECSSSCCSHHHHTHHH---HTTCSEEEESSCC
T ss_pred ccCCEEEECCCccccHHHHHHHH---HCCCEEEEECCCC
Confidence 47999999999877777665543 2454455555544
No 313
>3l07_A Bifunctional protein fold; structural genomics, IDP01849, methylenetetrahydrofolate dehydrogenase; 1.88A {Francisella tularensis}
Probab=89.90 E-value=0.56 Score=43.46 Aligned_cols=65 Identities=20% Similarity=0.309 Sum_probs=43.1
Q ss_pred CCCcEEEEcCCh-hhHHHHHHHHhhcHHHHhhCCCeE--e----cChHHhhcCCCEEEEeeC-CccHHHHHHhhccccCC
Q psy6714 131 NRSDKQIAGTTE-RGPGALIASLNIVSKATGTMGAKI--T----FDNKEVTLNSEVIILAVK-PHIVPVALNDIKPVFNE 202 (303)
Q Consensus 131 ~~mkIgIIGlG~-MG~~~La~al~r~~e~l~e~Gv~v--~----~d~~eav~~ADIVILAVp-P~~v~~VL~eI~~~L~~ 202 (303)
...++.|||.|. +|.+ ++.. +...|+++ + .+..+.+++|||||.+++ |..+. .+.+++
T Consensus 160 ~Gk~vvVIG~s~iVG~p-~A~l-------L~~~gAtVtv~hs~t~~L~~~~~~ADIVI~Avg~p~~I~------~~~vk~ 225 (285)
T 3l07_A 160 EGAYAVVVGASNVVGKP-VSQL-------LLNAKATVTTCHRFTTDLKSHTTKADILIVAVGKPNFIT------ADMVKE 225 (285)
T ss_dssp TTCEEEEECCCTTTHHH-HHHH-------HHHTTCEEEEECTTCSSHHHHHTTCSEEEECCCCTTCBC------GGGSCT
T ss_pred CCCEEEEECCCchhHHH-HHHH-------HHHCCCeEEEEeCCchhHHHhcccCCEEEECCCCCCCCC------HHHcCC
Confidence 457899999887 6985 4332 22334432 2 356788999999999996 33321 234678
Q ss_pred CCEEEEe
Q psy6714 203 SNLLISV 209 (303)
Q Consensus 203 g~IVVSi 209 (303)
+.+||.+
T Consensus 226 GavVIDv 232 (285)
T 3l07_A 226 GAVVIDV 232 (285)
T ss_dssp TCEEEEC
T ss_pred CcEEEEe
Confidence 8888865
No 314
>2d2i_A Glyceraldehyde 3-phosphate dehydrogenase; rossmann fold, protein-NADP+ complex, oxidoreductase; HET: NAP; 2.50A {Synechococcus SP} PDB: 2duu_A
Probab=89.79 E-value=0.24 Score=47.67 Aligned_cols=33 Identities=9% Similarity=0.182 Sum_probs=21.0
Q ss_pred CCCEEEEeeCCccHHHHHHhhccccCCCCEEEEe
Q psy6714 176 NSEVIILAVKPHIVPVALNDIKPVFNESNLLISV 209 (303)
Q Consensus 176 ~ADIVILAVpP~~v~~VL~eI~~~L~~g~IVVSi 209 (303)
++|+||.|++.....+.+...... ...++|||.
T Consensus 91 gvDvV~e~TG~f~s~e~a~~hl~a-GakkVVIs~ 123 (380)
T 2d2i_A 91 DIDLVIESTGVFVTAEGASKHIQA-GAKKVLITA 123 (380)
T ss_dssp TCCEEEECSSSCCBHHHHHHHHHT-TCSEEEESS
T ss_pred CCCEEEECCCccccHHHHHHHHHc-CCcEEEEcC
Confidence 789999999877776666554321 122345554
No 315
>4h7p_A Malate dehydrogenase; ssgcid, structural G seattle structural genomics center for infectious disease, oxidoreductase; 1.30A {Leishmania major}
Probab=89.28 E-value=0.98 Score=42.72 Aligned_cols=52 Identities=15% Similarity=0.085 Sum_probs=33.0
Q ss_pred eEecChHHhhcCCCEEEEee----CCc------------cHHHHHHhhccccCCCCEEEEecCCCcHH
Q psy6714 165 KITFDNKEVTLNSEVIILAV----KPH------------IVPVALNDIKPVFNESNLLISVAGGVPIK 216 (303)
Q Consensus 165 ~v~~d~~eav~~ADIVILAV----pP~------------~v~~VL~eI~~~L~~g~IVVSiaaGV~ie 216 (303)
.+..+..+++++|||||++- +|- .+.++.+.|..+-.++.+|+-+.++++.-
T Consensus 89 ~~~~~~~~a~~~advVvi~aG~prkpGmtR~DLl~~Na~I~~~~~~~i~~~a~~~~~vlvvsNPvd~~ 156 (345)
T 4h7p_A 89 VVTADPRVAFDGVAIAIMCGAFPRKAGMERKDLLEMNARIFKEQGEAIAAVAASDCRVVVVGNPANTN 156 (345)
T ss_dssp EEESCHHHHTTTCSEEEECCCCCCCTTCCHHHHHHHHHHHHHHHHHHHHHHSCTTCEEEECSSSHHHH
T ss_pred EEcCChHHHhCCCCEEEECCCCCCCCCCCHHHHHHHhHHHHHHHHHHHHhhccCceEEEEeCCCcchH
Confidence 35567788899999999975 232 12333444555444676666677777653
No 316
>1rm4_O Glyceraldehyde 3-phosphate dehydrogenase A; rossmann fold, GAPDH-NADP complex, oxidoreductase; HET: NDP; 2.00A {Spinacia oleracea} SCOP: c.2.1.3 d.81.1.1 PDB: 1nbo_O* 2hki_A 2pkq_P* 1rm5_O* 1rm3_O* 2pkr_O* 1jn0_O* 3qv1_A* 3k2b_A* 3rvd_A* 2pkq_O*
Probab=89.00 E-value=0.4 Score=45.33 Aligned_cols=34 Identities=3% Similarity=-0.032 Sum_probs=22.3
Q ss_pred CCCEEEEeeCCccHHHHHHhhccccCCCCEEEEecCC
Q psy6714 176 NSEVIILAVKPHIVPVALNDIKPVFNESNLLISVAGG 212 (303)
Q Consensus 176 ~ADIVILAVpP~~v~~VL~eI~~~L~~g~IVVSiaaG 212 (303)
++|+||.|++...-.+....+.. .|..+|.+.+.
T Consensus 91 gvDiV~eatg~~~s~e~a~~~l~---~Gak~V~iSap 124 (337)
T 1rm4_O 91 GIDLVIEGTGVFVDRDGAGKHLQ---AGAKKVLITAP 124 (337)
T ss_dssp TCCEEEECSSSCCBHHHHHHHHH---TTCSEEEESSC
T ss_pred CCCEEEECCCchhhHHHHHHHHH---cCCEEEEECCc
Confidence 79999999997777766655432 34444444443
No 317
>3cmc_O GAPDH, glyceraldehyde-3-phosphate dehydrogenase; microspectrophotometry, reaction intermediate, dehydrogenase phosphate binding site; HET: G3H NAD; 1.77A {Bacillus stearothermophilus} SCOP: c.2.1.3 d.81.1.1 PDB: 2gd1_O 1gd1_O* 1npt_O* 1nqa_O* 1nqo_O* 1nq5_O* 2dbv_O* 1dbv_O* 3dbv_O* 4dbv_O*
Probab=88.95 E-value=0.3 Score=46.05 Aligned_cols=32 Identities=6% Similarity=0.083 Sum_probs=22.6
Q ss_pred CCCEEEEeeCCccHHHHHHhhccccCCCC--EEEEec
Q psy6714 176 NSEVIILAVKPHIVPVALNDIKPVFNESN--LLISVA 210 (303)
Q Consensus 176 ~ADIVILAVpP~~v~~VL~eI~~~L~~g~--IVVSia 210 (303)
++|+||.|++...-.+....+.. .|. +|||..
T Consensus 88 ~vDvV~~atg~~~s~e~a~~~l~---~Gak~vVId~p 121 (334)
T 3cmc_O 88 GVDIVVESTGRFTKREDAAKHLE---AGAKKVIISAP 121 (334)
T ss_dssp TCCEEEECSSSCCBHHHHTHHHH---TTCSEEEESSC
T ss_pred ccCEEEECCCchhhHHHHHHHHH---CCCCEEEEeCC
Confidence 79999999998777777655432 343 777653
No 318
>2c2x_A Methylenetetrahydrofolate dehydrogenase- methenyltetrahydrofolate cyclohydrolase; NADP; 2.0A {Mycobacterium tuberculosis} PDB: 2c2y_A
Probab=88.79 E-value=0.78 Score=42.43 Aligned_cols=67 Identities=16% Similarity=0.151 Sum_probs=43.2
Q ss_pred cCCCcEEEEcCChh-hHHHHHHHHhhcHHHHhhC--CCeE--e----cChHHhhcCCCEEEEeeCCccHHHHHHhhcccc
Q psy6714 130 WNRSDKQIAGTTER-GPGALIASLNIVSKATGTM--GAKI--T----FDNKEVTLNSEVIILAVKPHIVPVALNDIKPVF 200 (303)
Q Consensus 130 ~~~mkIgIIGlG~M-G~~~La~al~r~~e~l~e~--Gv~v--~----~d~~eav~~ADIVILAVpP~~v~~VL~eI~~~L 200 (303)
+..+++.|||.|.| |.+ ++.. +... |.++ + .+..+.+++|||||.++....+ +. .+.+
T Consensus 156 l~gk~vvVvG~s~iVG~p-~A~l-------L~~~g~~atVtv~h~~t~~L~~~~~~ADIVI~Avg~p~~---I~--~~~v 222 (281)
T 2c2x_A 156 IAGAHVVVIGRGVTVGRP-LGLL-------LTRRSENATVTLCHTGTRDLPALTRQADIVVAAVGVAHL---LT--ADMV 222 (281)
T ss_dssp CTTCEEEEECCCTTTHHH-HHHH-------HTSTTTCCEEEEECTTCSCHHHHHTTCSEEEECSCCTTC---BC--GGGS
T ss_pred CCCCEEEEECCCcHHHHH-HHHH-------HhcCCCCCEEEEEECchhHHHHHHhhCCEEEECCCCCcc---cC--HHHc
Confidence 34678999999986 885 4333 2233 4433 2 4567889999999999963322 11 2335
Q ss_pred CCCCEEEEe
Q psy6714 201 NESNLLISV 209 (303)
Q Consensus 201 ~~g~IVVSi 209 (303)
+++.+||.+
T Consensus 223 k~GavVIDV 231 (281)
T 2c2x_A 223 RPGAAVIDV 231 (281)
T ss_dssp CTTCEEEEC
T ss_pred CCCcEEEEc
Confidence 678888854
No 319
>1leh_A Leucine dehydrogenase; oxidoreductase; 2.20A {Lysinibacillus sphaericus} SCOP: c.2.1.7 c.58.1.1
Probab=88.74 E-value=0.51 Score=44.99 Aligned_cols=98 Identities=10% Similarity=0.100 Sum_probs=53.1
Q ss_pred cCCCcEEEEcCChhhHHHHHHHH----------hhcHHH----HhhCCCeEecChHHhhc-CCCEEEEeeCCccHH-HHH
Q psy6714 130 WNRSDKQIAGTTERGPGALIASL----------NIVSKA----TGTMGAKITFDNKEVTL-NSEVIILAVKPHIVP-VAL 193 (303)
Q Consensus 130 ~~~mkIgIIGlG~MG~~~La~al----------~r~~e~----l~e~Gv~v~~d~~eav~-~ADIVILAVpP~~v~-~VL 193 (303)
+..++|+|+|+|+||.. ++..+ +.+.++ ..++|.... +..++.. +|||++.|.....+. +.+
T Consensus 171 L~GktV~V~G~G~VG~~-~A~~L~~~GakVvv~D~~~~~l~~~a~~~ga~~v-~~~~ll~~~~DIvip~a~~~~I~~~~~ 248 (364)
T 1leh_A 171 LEGLAVSVQGLGNVAKA-LCKKLNTEGAKLVVTDVNKAAVSAAVAEEGADAV-APNAIYGVTCDIFAPCALGAVLNDFTI 248 (364)
T ss_dssp CTTCEEEEECCSHHHHH-HHHHHHHTTCEEEEECSCHHHHHHHHHHHCCEEC-CGGGTTTCCCSEEEECSCSCCBSTTHH
T ss_pred CCcCEEEEECchHHHHH-HHHHHHHCCCEEEEEcCCHHHHHHHHHHcCCEEE-ChHHHhccCCcEeeccchHHHhCHHHH
Confidence 45689999999999994 55432 122222 223476553 4445444 899999987554442 233
Q ss_pred HhhccccCCCCEEEEecCCCc-HHHHHhhCCCCCceEEEecCcH
Q psy6714 194 NDIKPVFNESNLLISVAGGVP-IKNMEQALPKNSRIIRAMPNTP 236 (303)
Q Consensus 194 ~eI~~~L~~g~IVVSiaaGV~-ie~L~~~l~~~~~VVr~mPn~p 236 (303)
+.+ ...+|+..+++-. .+...+.|.. .-+.+.|...
T Consensus 249 ~~l-----g~~iV~e~An~p~t~~ea~~~L~~--~Gi~~~Pd~~ 285 (364)
T 1leh_A 249 PQL-----KAKVIAGSADNQLKDPRHGKYLHE--LGIVYAPDYV 285 (364)
T ss_dssp HHC-----CCSEECCSCSCCBSSHHHHHHHHH--HTCEECCHHH
T ss_pred HhC-----CCcEEEeCCCCCcccHHHHHHHHh--CCCEEeccee
Confidence 333 3346664544432 2344444432 2245556543
No 320
>4a26_A Putative C-1-tetrahydrofolate synthase, cytoplasm; oxidoreductase, hydrolase, leishmaniasis; 2.70A {Leishmania major}
Probab=88.65 E-value=0.59 Score=43.65 Aligned_cols=65 Identities=15% Similarity=0.227 Sum_probs=42.7
Q ss_pred CCCcEEEEcCCh-hhHHHHHHHHhhcHHHHhhCCCeE--ec----ChH--HhhcCCCEEEEeeC-CccHHHHHHhhcccc
Q psy6714 131 NRSDKQIAGTTE-RGPGALIASLNIVSKATGTMGAKI--TF----DNK--EVTLNSEVIILAVK-PHIVPVALNDIKPVF 200 (303)
Q Consensus 131 ~~mkIgIIGlG~-MG~~~La~al~r~~e~l~e~Gv~v--~~----d~~--eav~~ADIVILAVp-P~~v~~VL~eI~~~L 200 (303)
...++.|||.|. +|.+ ++.. +...|+++ +. +.. +.+++|||||.+++ |..+. .+++
T Consensus 164 ~Gk~vvVIG~s~iVG~p-~A~l-------L~~~gAtVtv~~~~T~~l~l~~~~~~ADIVI~Avg~p~~I~------~~~v 229 (300)
T 4a26_A 164 AGKRAVVLGRSNIVGAP-VAAL-------LMKENATVTIVHSGTSTEDMIDYLRTADIVIAAMGQPGYVK------GEWI 229 (300)
T ss_dssp TTCEEEEECCCTTTHHH-HHHH-------HHHTTCEEEEECTTSCHHHHHHHHHTCSEEEECSCCTTCBC------GGGS
T ss_pred CCCEEEEECCCchHHHH-HHHH-------HHHCCCeEEEEeCCCCCchhhhhhccCCEEEECCCCCCCCc------HHhc
Confidence 457899999887 7985 4322 22335443 32 356 78899999999997 43221 2346
Q ss_pred CCCCEEEEe
Q psy6714 201 NESNLLISV 209 (303)
Q Consensus 201 ~~g~IVVSi 209 (303)
+++.+||.+
T Consensus 230 k~GavVIDv 238 (300)
T 4a26_A 230 KEGAAVVDV 238 (300)
T ss_dssp CTTCEEEEC
T ss_pred CCCcEEEEE
Confidence 788888865
No 321
>3p2o_A Bifunctional protein fold; structural genomics, center for structural genomics of infec diseases, csgid, alpha-beta-alpha sandwich; HET: NAD; 2.23A {Campylobacter jejuni subsp}
Probab=88.61 E-value=0.68 Score=42.90 Aligned_cols=65 Identities=20% Similarity=0.286 Sum_probs=43.1
Q ss_pred CCCcEEEEcCCh-hhHHHHHHHHhhcHHHHhhCCCeE--e----cChHHhhcCCCEEEEeeC-CccHHHHHHhhccccCC
Q psy6714 131 NRSDKQIAGTTE-RGPGALIASLNIVSKATGTMGAKI--T----FDNKEVTLNSEVIILAVK-PHIVPVALNDIKPVFNE 202 (303)
Q Consensus 131 ~~mkIgIIGlG~-MG~~~La~al~r~~e~l~e~Gv~v--~----~d~~eav~~ADIVILAVp-P~~v~~VL~eI~~~L~~ 202 (303)
..+++.|||.|. +|.+ ++.. +...|+++ + .+..+.+++|||||.+++ |..+. .+.+++
T Consensus 159 ~Gk~vvVvGrs~iVG~p-~A~l-------L~~~gAtVtv~h~~t~~L~~~~~~ADIVI~Avg~p~~I~------~~~vk~ 224 (285)
T 3p2o_A 159 EGKDAVIIGASNIVGRP-MATM-------LLNAGATVSVCHIKTKDLSLYTRQADLIIVAAGCVNLLR------SDMVKE 224 (285)
T ss_dssp TTCEEEEECCCTTTHHH-HHHH-------HHHTTCEEEEECTTCSCHHHHHTTCSEEEECSSCTTCBC------GGGSCT
T ss_pred CCCEEEEECCCchHHHH-HHHH-------HHHCCCeEEEEeCCchhHHHHhhcCCEEEECCCCCCcCC------HHHcCC
Confidence 457899999887 5885 4322 22335443 2 356788999999999996 33321 234678
Q ss_pred CCEEEEe
Q psy6714 203 SNLLISV 209 (303)
Q Consensus 203 g~IVVSi 209 (303)
+.+||.+
T Consensus 225 GavVIDV 231 (285)
T 3p2o_A 225 GVIVVDV 231 (285)
T ss_dssp TEEEEEC
T ss_pred CeEEEEe
Confidence 8888755
No 322
>1edz_A 5,10-methylenetetrahydrofolate dehydrogenase; nucleotide-binding domain, monofunctional, oxidoreductase; 2.80A {Saccharomyces cerevisiae} SCOP: c.2.1.7 c.58.1.2 PDB: 1ee9_A*
Probab=88.52 E-value=0.58 Score=44.02 Aligned_cols=77 Identities=18% Similarity=0.142 Sum_probs=43.4
Q ss_pred cCCCcEEEEcCChh-hHHHHHHHHhh----------cH----HHHhhCC---CeE-----e--cChHHhhcCCCEEEEee
Q psy6714 130 WNRSDKQIAGTTER-GPGALIASLNI----------VS----KATGTMG---AKI-----T--FDNKEVTLNSEVIILAV 184 (303)
Q Consensus 130 ~~~mkIgIIGlG~M-G~~~La~al~r----------~~----e~l~e~G---v~v-----~--~d~~eav~~ADIVILAV 184 (303)
+...++.|||.|.| |.. ++..+.. .. ++..+++ ... + .+..+.+++|||||.||
T Consensus 175 l~gk~vvVIG~G~iVG~~-~A~~L~~~gAtVtv~nR~~~~l~~ra~~la~~~~~~t~~~~t~~~~L~e~l~~ADIVIsAt 253 (320)
T 1edz_A 175 LYGKKCIVINRSEIVGRP-LAALLANDGATVYSVDVNNIQKFTRGESLKLNKHHVEDLGEYSEDLLKKCSLDSDVVITGV 253 (320)
T ss_dssp TTTCEEEEECCCTTTHHH-HHHHHHTTSCEEEEECSSEEEEEESCCCSSCCCCEEEEEEECCHHHHHHHHHHCSEEEECC
T ss_pred CCCCEEEEECCCcchHHH-HHHHHHHCCCEEEEEeCchHHHHhHHHHHhhhcccccccccccHhHHHHHhccCCEEEECC
Confidence 44678999999976 884 4443211 10 0111111 111 1 45678889999999999
Q ss_pred CCccHHHHHHhhccccCCCCEEEEecC
Q psy6714 185 KPHIVPVALNDIKPVFNESNLLISVAG 211 (303)
Q Consensus 185 pP~~v~~VL~eI~~~L~~g~IVVSiaa 211 (303)
....+ ++. .+.++++.+||.+..
T Consensus 254 g~p~~--vI~--~e~vk~GavVIDVgi 276 (320)
T 1edz_A 254 PSENY--KFP--TEYIKEGAVCINFAC 276 (320)
T ss_dssp CCTTC--CBC--TTTSCTTEEEEECSS
T ss_pred CCCcc--eeC--HHHcCCCeEEEEcCC
Confidence 64321 011 223567888887643
No 323
>1a4i_A Methylenetetrahydrofolate dehydrogenase / methenyltetrahydrofolate cyclohydrolase...; THF, bifunctional, oxidoreductase; HET: NDP; 1.50A {Homo sapiens} SCOP: c.2.1.7 c.58.1.2 PDB: 1dia_A* 1dib_A* 1dig_A*
Probab=88.16 E-value=0.98 Score=42.16 Aligned_cols=66 Identities=9% Similarity=0.112 Sum_probs=43.3
Q ss_pred CCCcEEEEcCCh-hhHHHHHHHHhhcHHHHhhCCCeE--e----cChHHhhcCCCEEEEeeCCccHHHHHHhhccccCCC
Q psy6714 131 NRSDKQIAGTTE-RGPGALIASLNIVSKATGTMGAKI--T----FDNKEVTLNSEVIILAVKPHIVPVALNDIKPVFNES 203 (303)
Q Consensus 131 ~~mkIgIIGlG~-MG~~~La~al~r~~e~l~e~Gv~v--~----~d~~eav~~ADIVILAVpP~~v~~VL~eI~~~L~~g 203 (303)
...++.|||.|. +|.+ ++.. +...|.++ + .+..+.+++|||||.++....+ +. .+.++++
T Consensus 164 ~gk~vvVIG~s~iVG~p-~A~l-------L~~~gAtVtv~hs~t~~L~~~~~~ADIVI~Avg~p~~---I~--~~~vk~G 230 (301)
T 1a4i_A 164 AGRHAVVVGRSKIVGAP-MHDL-------LLWNNATVTTCHSKTAHLDEEVNKGDILVVATGQPEM---VK--GEWIKPG 230 (301)
T ss_dssp TTCEEEEECCCTTTHHH-HHHH-------HHHTTCEEEEECTTCSSHHHHHTTCSEEEECCCCTTC---BC--GGGSCTT
T ss_pred CCCEEEEECCCchHHHH-HHHH-------HHhCCCeEEEEECCcccHHHHhccCCEEEECCCCccc---CC--HHHcCCC
Confidence 457899999996 6985 3322 22334432 2 4567889999999999964322 11 2346688
Q ss_pred CEEEEe
Q psy6714 204 NLLISV 209 (303)
Q Consensus 204 ~IVVSi 209 (303)
.+||.+
T Consensus 231 avVIDV 236 (301)
T 1a4i_A 231 AIVIDC 236 (301)
T ss_dssp CEEEEC
T ss_pred cEEEEc
Confidence 888866
No 324
>4a5o_A Bifunctional protein fold; oxidoreductase, hydrolase; 2.20A {Pseudomonas aeruginosa PAO1}
Probab=87.94 E-value=0.84 Score=42.32 Aligned_cols=65 Identities=18% Similarity=0.283 Sum_probs=43.1
Q ss_pred CCCcEEEEcCCh-hhHHHHHHHHhhcHHHHhhCCCeE--e----cChHHhhcCCCEEEEeeC-CccHHHHHHhhccccCC
Q psy6714 131 NRSDKQIAGTTE-RGPGALIASLNIVSKATGTMGAKI--T----FDNKEVTLNSEVIILAVK-PHIVPVALNDIKPVFNE 202 (303)
Q Consensus 131 ~~mkIgIIGlG~-MG~~~La~al~r~~e~l~e~Gv~v--~----~d~~eav~~ADIVILAVp-P~~v~~VL~eI~~~L~~ 202 (303)
..+++.|||.|. +|.+ ++.. +...|+++ + .+..+.+++|||||.+++ |..+. .+.+++
T Consensus 160 ~Gk~vvVvGrs~iVG~p-lA~l-------L~~~gAtVtv~hs~T~~L~~~~~~ADIVI~Avg~p~~I~------~~~vk~ 225 (286)
T 4a5o_A 160 YGMDAVVVGASNIVGRP-MALE-------LLLGGCTVTVTHRFTRDLADHVSRADLVVVAAGKPGLVK------GEWIKE 225 (286)
T ss_dssp TTCEEEEECTTSTTHHH-HHHH-------HHHTTCEEEEECTTCSCHHHHHHTCSEEEECCCCTTCBC------GGGSCT
T ss_pred CCCEEEEECCCchhHHH-HHHH-------HHHCCCeEEEEeCCCcCHHHHhccCCEEEECCCCCCCCC------HHHcCC
Confidence 457899999876 7885 4332 22334432 2 356788999999999996 33321 234678
Q ss_pred CCEEEEe
Q psy6714 203 SNLLISV 209 (303)
Q Consensus 203 g~IVVSi 209 (303)
+.+||.+
T Consensus 226 GavVIDv 232 (286)
T 4a5o_A 226 GAIVIDV 232 (286)
T ss_dssp TCEEEEC
T ss_pred CeEEEEe
Confidence 8888865
No 325
>1b0a_A Protein (fold bifunctional protein); folate, dehydrogenase, cyclcohydrolase, channeling, oxidoreductase,hydrolase; 2.56A {Escherichia coli K12} SCOP: c.2.1.7 c.58.1.2
Probab=87.75 E-value=0.75 Score=42.68 Aligned_cols=66 Identities=17% Similarity=0.185 Sum_probs=43.1
Q ss_pred CCCcEEEEcCCh-hhHHHHHHHHhhcHHHHhhCCCeE--e----cChHHhhcCCCEEEEeeCCccHHHHHHhhccccCCC
Q psy6714 131 NRSDKQIAGTTE-RGPGALIASLNIVSKATGTMGAKI--T----FDNKEVTLNSEVIILAVKPHIVPVALNDIKPVFNES 203 (303)
Q Consensus 131 ~~mkIgIIGlG~-MG~~~La~al~r~~e~l~e~Gv~v--~----~d~~eav~~ADIVILAVpP~~v~~VL~eI~~~L~~g 203 (303)
...++.|||.|. +|.+ ++.. +...|.++ + .+..+.+++||+||.++....+ +. .++++++
T Consensus 158 ~gk~vvVIG~s~iVG~p-~A~l-------L~~~gAtVtv~hs~t~~L~~~~~~ADIVI~Avg~p~l---I~--~~~vk~G 224 (288)
T 1b0a_A 158 FGLNAVVIGASNIVGRP-MSME-------LLLAGCTTTVTHRFTKNLRHHVENADLLIVAVGKPGF---IP--GDWIKEG 224 (288)
T ss_dssp TTCEEEEECCCTTTHHH-HHHH-------HHTTTCEEEEECSSCSCHHHHHHHCSEEEECSCCTTC---BC--TTTSCTT
T ss_pred CCCEEEEECCChHHHHH-HHHH-------HHHCCCeEEEEeCCchhHHHHhccCCEEEECCCCcCc---CC--HHHcCCC
Confidence 457899999997 5985 3322 22345443 2 3567888999999999963322 11 2345788
Q ss_pred CEEEEe
Q psy6714 204 NLLISV 209 (303)
Q Consensus 204 ~IVVSi 209 (303)
.+||.+
T Consensus 225 avVIDV 230 (288)
T 1b0a_A 225 AIVIDV 230 (288)
T ss_dssp CEEEEC
T ss_pred cEEEEc
Confidence 888854
No 326
>1b8p_A Protein (malate dehydrogenase); oxidoreductase; 1.90A {Aquaspirillum arcticum} SCOP: c.2.1.5 d.162.1.1 PDB: 1b8u_A* 1b8v_A* 3d5t_A
Probab=87.54 E-value=1.6 Score=40.40 Aligned_cols=49 Identities=16% Similarity=0.141 Sum_probs=30.3
Q ss_pred ecChHHhhcCCCEEEEeeC-Cc----c-----------HHHHHHhhccccCCCCEEEEecCCCcH
Q psy6714 167 TFDNKEVTLNSEVIILAVK-PH----I-----------VPVALNDIKPVFNESNLLISVAGGVPI 215 (303)
Q Consensus 167 ~~d~~eav~~ADIVILAVp-P~----~-----------v~~VL~eI~~~L~~g~IVVSiaaGV~i 215 (303)
..+..+++++||+||++.- +. . +.++++.+..+-+++..||-..+++..
T Consensus 74 ~~~~~~al~~aD~Vi~~ag~~~~~g~~r~dl~~~N~~i~~~i~~~i~~~~~p~a~ii~~SNPv~~ 138 (329)
T 1b8p_A 74 HADPMTAFKDADVALLVGARPRGPGMERKDLLEANAQIFTVQGKAIDAVASRNIKVLVVGNPANT 138 (329)
T ss_dssp ESSHHHHTTTCSEEEECCCCCCCTTCCHHHHHHHHHHHHHHHHHHHHHHSCTTCEEEECSSSHHH
T ss_pred ecCcHHHhCCCCEEEEeCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhcCCCeEEEEccCchHH
Confidence 4566788999999999873 21 1 334555565543245566656666654
No 327
>2axq_A Saccharopine dehydrogenase; rossmann fold variant, saccharopine reductase fold (domain II), alpha/beta protein; 1.70A {Saccharomyces cerevisiae}
Probab=86.74 E-value=0.99 Score=44.24 Aligned_cols=75 Identities=12% Similarity=0.169 Sum_probs=42.5
Q ss_pred CCCcEEEEcCChhhHHHHHHHHh-----------hcHHHH---h-hCCCeE-ec------ChHHhhcCCCEEEEeeCCcc
Q psy6714 131 NRSDKQIAGTTERGPGALIASLN-----------IVSKAT---G-TMGAKI-TF------DNKEVTLNSEVIILAVKPHI 188 (303)
Q Consensus 131 ~~mkIgIIGlG~MG~~~La~al~-----------r~~e~l---~-e~Gv~v-~~------d~~eav~~ADIVILAVpP~~ 188 (303)
.+++|.|||+|.+|.+ ++..+. +..+++ . ..++.. .. +..++++++|+||.|+++..
T Consensus 22 ~~k~VlIiGAGgiG~a-ia~~L~~~~g~~V~v~~R~~~ka~~la~~~~~~~~~~D~~d~~~l~~~l~~~DvVIn~tp~~~ 100 (467)
T 2axq_A 22 MGKNVLLLGSGFVAQP-VIDTLAANDDINVTVACRTLANAQALAKPSGSKAISLDVTDDSALDKVLADNDVVISLIPYTF 100 (467)
T ss_dssp -CEEEEEECCSTTHHH-HHHHHHTSTTEEEEEEESSHHHHHHHHGGGTCEEEECCTTCHHHHHHHHHTSSEEEECSCGGG
T ss_pred CCCEEEEECChHHHHH-HHHHHHhCCCCeEEEEECCHHHHHHHHHhcCCcEEEEecCCHHHHHHHHcCCCEEEECCchhh
Confidence 4678999999999994 444321 222222 2 234432 11 23456778999999998765
Q ss_pred HHHHHHhhccccCCCCEEEEe
Q psy6714 189 VPVALNDIKPVFNESNLLISV 209 (303)
Q Consensus 189 v~~VL~eI~~~L~~g~IVVSi 209 (303)
-..+.... +..+..++.+
T Consensus 101 ~~~v~~a~---l~~g~~vvd~ 118 (467)
T 2axq_A 101 HPNVVKSA---IRTKTDVVTS 118 (467)
T ss_dssp HHHHHHHH---HHHTCEEEEC
T ss_pred hHHHHHHH---HhcCCEEEEe
Confidence 44443322 2234555543
No 328
>3o8q_A Shikimate 5-dehydrogenase I alpha; structural genomics, center for structural genomics of infec diseases, csgid; HET: EPE; 1.45A {Vibrio cholerae biovar el tor} PDB: 3sef_A* 3pgj_A* 3o8q_B*
Probab=85.20 E-value=0.71 Score=42.22 Aligned_cols=107 Identities=16% Similarity=0.141 Sum_probs=54.4
Q ss_pred CCCcEEEEcCChhhHHHHHHHH-----------hhcHHHH----hhC---C-CeEecChHHhhcCCCEEEEeeCCccHHH
Q psy6714 131 NRSDKQIAGTTERGPGALIASL-----------NIVSKAT----GTM---G-AKITFDNKEVTLNSEVIILAVKPHIVPV 191 (303)
Q Consensus 131 ~~mkIgIIGlG~MG~~~La~al-----------~r~~e~l----~e~---G-v~v~~d~~eav~~ADIVILAVpP~~v~~ 191 (303)
..+++.|+|+|.||.+ ++..+ +++.+++ .+. + +.+ .+..++..++|+||-|++.....+
T Consensus 125 ~~k~vlvlGaGg~g~a-ia~~L~~~G~~~v~v~~R~~~~a~~la~~~~~~~~~~~-~~~~~l~~~aDiIInaTp~gm~~~ 202 (281)
T 3o8q_A 125 KGATILLIGAGGAARG-VLKPLLDQQPASITVTNRTFAKAEQLAELVAAYGEVKA-QAFEQLKQSYDVIINSTSASLDGE 202 (281)
T ss_dssp TTCEEEEECCSHHHHH-HHHHHHTTCCSEEEEEESSHHHHHHHHHHHGGGSCEEE-EEGGGCCSCEEEEEECSCCCC---
T ss_pred cCCEEEEECchHHHHH-HHHHHHhcCCCeEEEEECCHHHHHHHHHHhhccCCeeE-eeHHHhcCCCCEEEEcCcCCCCCC
Confidence 3578999999999994 44332 2222222 111 1 222 234444478999999998554322
Q ss_pred HHHhh-ccccCCCCEEEEec-CCCcHHHHHhhCCCCCceEEEecCcHHhhhCC
Q psy6714 192 ALNDI-KPVFNESNLLISVA-GGVPIKNMEQALPKNSRIIRAMPNTPALVRQG 242 (303)
Q Consensus 192 VL~eI-~~~L~~g~IVVSia-aGV~ie~L~~~l~~~~~VVr~mPn~p~~v~~G 242 (303)
.. .+ ...++++.+|+.++ +.....-++..-..++. .++....+.+.|+
T Consensus 203 ~~-~l~~~~l~~~~~V~DlvY~P~~T~ll~~A~~~G~~--~~~~Gl~Mlv~Qa 252 (281)
T 3o8q_A 203 LP-AIDPVIFSSRSVCYDMMYGKGYTVFNQWARQHGCA--QAIDGLGMLVGQA 252 (281)
T ss_dssp -C-SCCGGGEEEEEEEEESCCCSSCCHHHHHHHHTTCS--EEECTHHHHHHHH
T ss_pred CC-CCCHHHhCcCCEEEEecCCCccCHHHHHHHHCCCC--EEECcHHHHHHHH
Confidence 10 11 12345667777654 23233333332221222 2556667766665
No 329
>2ph5_A Homospermidine synthase; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative; HET: NAD; 2.50A {Legionella pneumophila subsp}
Probab=85.06 E-value=2 Score=42.62 Aligned_cols=77 Identities=12% Similarity=0.036 Sum_probs=45.7
Q ss_pred CCcEEEEcCChhhHHHHHHHHhhc----------------HHHHhhCCCeEe-----cCh-----HHhhcCCCEEEEeeC
Q psy6714 132 RSDKQIAGTTERGPGALIASLNIV----------------SKATGTMGAKIT-----FDN-----KEVTLNSEVIILAVK 185 (303)
Q Consensus 132 ~mkIgIIGlG~MG~~~La~al~r~----------------~e~l~e~Gv~v~-----~d~-----~eav~~ADIVILAVp 185 (303)
.+||.|||+|.||..++-+..++. .+.....|+... .++ .+++++.|+||-+.+
T Consensus 13 ~~rVlIIGaGgVG~~va~lla~~~dv~~~~I~vaD~~~~~~~~~~~~g~~~~~~~Vdadnv~~~l~aLl~~~DvVIN~s~ 92 (480)
T 2ph5_A 13 KNRFVILGFGCVGQALMPLIFEKFDIKPSQVTIIAAEGTKVDVAQQYGVSFKLQQITPQNYLEVIGSTLEENDFLIDVSI 92 (480)
T ss_dssp CSCEEEECCSHHHHHHHHHHHHHBCCCGGGEEEEESSCCSCCHHHHHTCEEEECCCCTTTHHHHTGGGCCTTCEEEECCS
T ss_pred CCCEEEECcCHHHHHHHHHHHhCCCCceeEEEEeccchhhhhHHhhcCCceeEEeccchhHHHHHHHHhcCCCEEEECCc
Confidence 478999999999995433332211 011122354332 232 234555699998888
Q ss_pred CccHHHHHHhhccccCCCCEEEEecC
Q psy6714 186 PHIVPVALNDIKPVFNESNLLISVAG 211 (303)
Q Consensus 186 P~~v~~VL~eI~~~L~~g~IVVSiaa 211 (303)
+....++++.... .|..+|+++.
T Consensus 93 ~~~~l~Im~acle---aGv~YlDTa~ 115 (480)
T 2ph5_A 93 GISSLALIILCNQ---KGALYINAAT 115 (480)
T ss_dssp SSCHHHHHHHHHH---HTCEEEESSC
T ss_pred cccCHHHHHHHHH---cCCCEEECCC
Confidence 8877777765432 4567777764
No 330
>3ff4_A Uncharacterized protein; structural genomics, PSI- protein structure initiative, midwest center for structural genomics, MCSG; 2.10A {Cytophaga hutchinsonii atcc 33406}
Probab=84.74 E-value=0.27 Score=39.72 Aligned_cols=87 Identities=17% Similarity=0.224 Sum_probs=53.6
Q ss_pred CCcEEEEcCC----hhhHHHHHHHHhhcH-H------HHh-hCCCeEecChHHhhcCCCEEEEeeCCccHHHHHHhhccc
Q psy6714 132 RSDKQIAGTT----ERGPGALIASLNIVS-K------ATG-TMGAKITFDNKEVTLNSEVIILAVKPHIVPVALNDIKPV 199 (303)
Q Consensus 132 ~mkIgIIGlG----~MG~~~La~al~r~~-e------~l~-e~Gv~v~~d~~eav~~ADIVILAVpP~~v~~VL~eI~~~ 199 (303)
..+|+|||.. ..|. .+...+.... + +.. =.|..+..+..++=+ .|++++++|++.+.++++++...
T Consensus 4 p~siAVVGaS~~~~~~g~-~v~~~L~~~g~~V~pVnP~~~~i~G~~~y~sl~dlp~-vDlavi~~p~~~v~~~v~e~~~~ 81 (122)
T 3ff4_A 4 MKKTLILGATPETNRYAY-LAAERLKSHGHEFIPVGRKKGEVLGKTIINERPVIEG-VDTVTLYINPQNQLSEYNYILSL 81 (122)
T ss_dssp CCCEEEETCCSCTTSHHH-HHHHHHHHHTCCEEEESSSCSEETTEECBCSCCCCTT-CCEEEECSCHHHHGGGHHHHHHH
T ss_pred CCEEEEEccCCCCCCHHH-HHHHHHHHCCCeEEEECCCCCcCCCeeccCChHHCCC-CCEEEEEeCHHHHHHHHHHHHhc
Confidence 4569999974 4565 3333322110 0 011 135555566666556 89999999999999999887653
Q ss_pred cCCCCEEEEecCCCcHHHHHhhCC
Q psy6714 200 FNESNLLISVAGGVPIKNMEQALP 223 (303)
Q Consensus 200 L~~g~IVVSiaaGV~ie~L~~~l~ 223 (303)
.-..+ + +..|...+++.+.+.
T Consensus 82 -g~k~v-~-~~~G~~~~e~~~~a~ 102 (122)
T 3ff4_A 82 -KPKRV-I-FNPGTENEELEEILS 102 (122)
T ss_dssp -CCSEE-E-ECTTCCCHHHHHHHH
T ss_pred -CCCEE-E-ECCCCChHHHHHHHH
Confidence 23333 3 567887666666553
No 331
>4g65_A TRK system potassium uptake protein TRKA; structural genomics, center for structural genomics of infec diseases, csgid, niaid; HET: MSE; 2.09A {Vibrio vulnificus}
Probab=84.69 E-value=1.4 Score=43.00 Aligned_cols=65 Identities=12% Similarity=0.141 Sum_probs=40.1
Q ss_pred CCCcEEEEcCChhhHHHHHHHHh----------hcHHH---Hh-hCCCeE-ecC------hHHh-hcCCCEEEEeeCCcc
Q psy6714 131 NRSDKQIAGTTERGPGALIASLN----------IVSKA---TG-TMGAKI-TFD------NKEV-TLNSEVIILAVKPHI 188 (303)
Q Consensus 131 ~~mkIgIIGlG~MG~~~La~al~----------r~~e~---l~-e~Gv~v-~~d------~~ea-v~~ADIVILAVpP~~ 188 (303)
..|||-|+|+|.+|. .|+..+. .+.++ +. .+++.+ ..| ..++ +++||++|.++..+.
T Consensus 2 ~~M~iiI~G~G~vG~-~la~~L~~~~~~v~vId~d~~~~~~~~~~~~~~~i~Gd~~~~~~L~~Agi~~ad~~ia~t~~De 80 (461)
T 4g65_A 2 NAMKIIILGAGQVGG-TLAENLVGENNDITIVDKDGDRLRELQDKYDLRVVNGHASHPDVLHEAGAQDADMLVAVTNTDE 80 (461)
T ss_dssp CCEEEEEECCSHHHH-HHHHHTCSTTEEEEEEESCHHHHHHHHHHSSCEEEESCTTCHHHHHHHTTTTCSEEEECCSCHH
T ss_pred CcCEEEEECCCHHHH-HHHHHHHHCCCCEEEEECCHHHHHHHHHhcCcEEEEEcCCCHHHHHhcCCCcCCEEEEEcCChH
Confidence 369999999999999 6887642 22232 32 456653 222 1222 578998887777665
Q ss_pred HHHHHHhh
Q psy6714 189 VPVALNDI 196 (303)
Q Consensus 189 v~~VL~eI 196 (303)
+.=++..+
T Consensus 81 ~Nl~~~~~ 88 (461)
T 4g65_A 81 TNMAACQV 88 (461)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHH
Confidence 54443333
No 332
>4ina_A Saccharopine dehydrogenase; structural genomics, PSI-biology, northeast structural genom consortium, NESG, oxidoreductas; 2.49A {Wolinella succinogenes}
Probab=84.12 E-value=0.46 Score=45.41 Aligned_cols=63 Identities=8% Similarity=0.031 Sum_probs=36.7
Q ss_pred CCcEEEEcCChhhHHHHHHHHhhc-------------HHHH-------hhC---CCeE-e------cChHHhhcC--CCE
Q psy6714 132 RSDKQIAGTTERGPGALIASLNIV-------------SKAT-------GTM---GAKI-T------FDNKEVTLN--SEV 179 (303)
Q Consensus 132 ~mkIgIIGlG~MG~~~La~al~r~-------------~e~l-------~e~---Gv~v-~------~d~~eav~~--ADI 179 (303)
||||+|||+|.||. .++..+... .+++ ... .+.. . .+..+++++ +|+
T Consensus 1 M~kVlIiGaGgiG~-~ia~~L~~~g~~~~~V~v~~r~~~~~~~la~~l~~~~~~~~~~~~~D~~d~~~l~~~l~~~~~Dv 79 (405)
T 4ina_A 1 MAKVLQIGAGGVGG-VVAHKMAMNREVFSHITLASRTLSKCQEIAQSIKAKGYGEIDITTVDADSIEELVALINEVKPQI 79 (405)
T ss_dssp -CEEEEECCSHHHH-HHHHHHHTCTTTCCEEEEEESCHHHHHHHHHHHHHTTCCCCEEEECCTTCHHHHHHHHHHHCCSE
T ss_pred CCEEEEECCCHHHH-HHHHHHHhCCCCceEEEEEECCHHHHHHHHHHhhhhcCCceEEEEecCCCHHHHHHHHHhhCCCE
Confidence 57899999999998 455443211 1111 111 2322 1 123455665 899
Q ss_pred EEEeeCCccHHHHHHh
Q psy6714 180 IILAVKPHIVPVALND 195 (303)
Q Consensus 180 VILAVpP~~v~~VL~e 195 (303)
||.|+++..-..+++.
T Consensus 80 Vin~ag~~~~~~v~~a 95 (405)
T 4ina_A 80 VLNIALPYQDLTIMEA 95 (405)
T ss_dssp EEECSCGGGHHHHHHH
T ss_pred EEECCCcccChHHHHH
Confidence 9999988765566544
No 333
>3ond_A Adenosylhomocysteinase; plant protein, enzyme-substrate complex, NAD cofactor, regul SAM-dependent methylation reactions; HET: NAD ADN; 1.17A {Lupinus luteus} PDB: 3one_A* 3onf_A*
Probab=83.60 E-value=2 Score=42.62 Aligned_cols=74 Identities=12% Similarity=0.254 Sum_probs=46.9
Q ss_pred CCCcEEEEcCChhhHHHHHHHHh----------hcHH---HHhhCCCeEecChHHhhcCCCEEEEeeC-CccHHH-HHHh
Q psy6714 131 NRSDKQIAGTTERGPGALIASLN----------IVSK---ATGTMGAKITFDNKEVTLNSEVIILAVK-PHIVPV-ALND 195 (303)
Q Consensus 131 ~~mkIgIIGlG~MG~~~La~al~----------r~~e---~l~e~Gv~v~~d~~eav~~ADIVILAVp-P~~v~~-VL~e 195 (303)
..++++|+|.|.||. .++..+. .... .+...|+.+ .+..+++..+|+|+.+.. ...+.. .+.
T Consensus 264 ~GKtVvVtGaGgIG~-aiA~~Laa~GA~Viv~D~~~~~a~~Aa~~g~dv-~~lee~~~~aDvVi~atG~~~vl~~e~l~- 340 (488)
T 3ond_A 264 AGKVAVVAGYGDVGK-GCAAALKQAGARVIVTEIDPICALQATMEGLQV-LTLEDVVSEADIFVTTTGNKDIIMLDHMK- 340 (488)
T ss_dssp TTCEEEEECCSHHHH-HHHHHHHHTTCEEEEECSCHHHHHHHHHTTCEE-CCGGGTTTTCSEEEECSSCSCSBCHHHHT-
T ss_pred cCCEEEEECCCHHHH-HHHHHHHHCCCEEEEEcCCHHHHHHHHHhCCcc-CCHHHHHHhcCEEEeCCCChhhhhHHHHH-
Confidence 357899999999999 4555432 2222 233556654 567788889999999885 333322 333
Q ss_pred hccccCCCCEEEEec
Q psy6714 196 IKPVFNESNLLISVA 210 (303)
Q Consensus 196 I~~~L~~g~IVVSia 210 (303)
.++++.+|+...
T Consensus 341 ---~mk~gaiVvNaG 352 (488)
T 3ond_A 341 ---KMKNNAIVCNIG 352 (488)
T ss_dssp ---TSCTTEEEEESS
T ss_pred ---hcCCCeEEEEcC
Confidence 345677776554
No 334
>1hdg_O Holo-D-glyceraldehyde-3-phosphate dehydrogenase; oxidoreductase (aldehy(D)-NAD(A)); HET: NAD; 2.50A {Thermotoga maritima} SCOP: c.2.1.3 d.81.1.1
Probab=83.29 E-value=0.95 Score=42.58 Aligned_cols=32 Identities=6% Similarity=-0.012 Sum_probs=22.7
Q ss_pred CCCEEEEeeCCccHHHHHHhhccccCCCC--EEEEec
Q psy6714 176 NSEVIILAVKPHIVPVALNDIKPVFNESN--LLISVA 210 (303)
Q Consensus 176 ~ADIVILAVpP~~v~~VL~eI~~~L~~g~--IVVSia 210 (303)
++|+||.|++...-.+....+.. .|. +|||..
T Consensus 89 ~vDvV~~atg~~~s~e~a~~~l~---aGakkvVId~~ 122 (332)
T 1hdg_O 89 GVDFVIESTGVFRNREKAELHLQ---AGAKKVIITAP 122 (332)
T ss_dssp TCCEEEECSSSCCBHHHHTHHHH---TTCSEEEESSC
T ss_pred CCCEEEECCccchhHHHHHHHHH---cCCcEEEEeCC
Confidence 79999999998777776655432 344 777653
No 335
>3lk7_A UDP-N-acetylmuramoylalanine--D-glutamate ligase; agalacitae, PSI, MCSG, structural genomics, midwest center for structural genomics; HET: MSE; 1.50A {Streptococcus agalactiae}
Probab=83.28 E-value=8.9 Score=36.76 Aligned_cols=53 Identities=15% Similarity=0.083 Sum_probs=33.9
Q ss_pred CCCcEEEEcCChhhHHHHHHHHhh-----------------cHHHHhhCCCeEec--ChHHhhcC-CCEEEEee
Q psy6714 131 NRSDKQIAGTTERGPGALIASLNI-----------------VSKATGTMGAKITF--DNKEVTLN-SEVIILAV 184 (303)
Q Consensus 131 ~~mkIgIIGlG~MG~~~La~al~r-----------------~~e~l~e~Gv~v~~--d~~eav~~-ADIVILAV 184 (303)
..+||.|||+|..|- +++..+.+ ..+.+.+.|+.+.. +..+.+.+ +|+||++.
T Consensus 8 ~~k~v~viG~G~sG~-s~A~~l~~~G~~V~~~D~~~~~~~~~~~~L~~~gi~~~~g~~~~~~~~~~~d~vv~sp 80 (451)
T 3lk7_A 8 ENKKVLVLGLARSGE-AAARLLAKLGAIVTVNDGKPFDENPTAQSLLEEGIKVVCGSHPLELLDEDFCYMIKNP 80 (451)
T ss_dssp TTCEEEEECCTTTHH-HHHHHHHHTTCEEEEEESSCGGGCHHHHHHHHTTCEEEESCCCGGGGGSCEEEEEECT
T ss_pred CCCEEEEEeeCHHHH-HHHHHHHhCCCEEEEEeCCcccCChHHHHHHhCCCEEEECCChHHhhcCCCCEEEECC
Confidence 467899999999998 45544311 11245667886542 33445566 89888864
No 336
>1p77_A Shikimate 5-dehydrogenase; NADPH, oxidoreductase; HET: ATR; 1.95A {Haemophilus influenzae} SCOP: c.2.1.7 c.58.1.5 PDB: 1p74_A*
Probab=82.96 E-value=0.87 Score=40.97 Aligned_cols=77 Identities=10% Similarity=0.163 Sum_probs=38.1
Q ss_pred CCCcEEEEcCChhhHHHHHHHH----------hhcHHH---Hh-hC----CCeEecChHHhhc-CCCEEEEeeCCccHHH
Q psy6714 131 NRSDKQIAGTTERGPGALIASL----------NIVSKA---TG-TM----GAKITFDNKEVTL-NSEVIILAVKPHIVPV 191 (303)
Q Consensus 131 ~~mkIgIIGlG~MG~~~La~al----------~r~~e~---l~-e~----Gv~v~~d~~eav~-~ADIVILAVpP~~v~~ 191 (303)
..+++.|+|+|.||.+ ++..+ +++.++ +. ++ .+.. .+..++.+ ++|+||-|++.....+
T Consensus 118 ~~~~vlvlGaGg~g~a-~a~~L~~~G~~v~v~~R~~~~a~~l~~~~~~~~~~~~-~~~~~~~~~~~DivIn~t~~~~~~~ 195 (272)
T 1p77_A 118 PNQHVLILGAGGATKG-VLLPLLQAQQNIVLANRTFSKTKELAERFQPYGNIQA-VSMDSIPLQTYDLVINATSAGLSGG 195 (272)
T ss_dssp TTCEEEEECCSHHHHT-THHHHHHTTCEEEEEESSHHHHHHHHHHHGGGSCEEE-EEGGGCCCSCCSEEEECCCC-----
T ss_pred CCCEEEEECCcHHHHH-HHHHHHHCCCEEEEEECCHHHHHHHHHHccccCCeEE-eeHHHhccCCCCEEEECCCCCCCCC
Confidence 3568999999999984 33321 233322 21 11 1222 23333334 8999999998554332
Q ss_pred HHHhhc-cccCCCCEEEEec
Q psy6714 192 ALNDIK-PVFNESNLLISVA 210 (303)
Q Consensus 192 VL~eI~-~~L~~g~IVVSia 210 (303)
+. .+. ..+.++.+|+.+.
T Consensus 196 ~~-~i~~~~l~~~~~v~D~~ 214 (272)
T 1p77_A 196 TA-SVDAEILKLGSAFYDMQ 214 (272)
T ss_dssp ---CCCHHHHHHCSCEEESC
T ss_pred CC-CCCHHHcCCCCEEEEee
Confidence 21 111 1133456667554
No 337
>5mdh_A Malate dehydrogenase; oxidoreductase, (NAD(A)-CHOH(D)); HET: NAD; 2.40A {Sus scrofa} SCOP: c.2.1.5 d.162.1.1 PDB: 4mdh_A*
Probab=82.86 E-value=1.6 Score=40.84 Aligned_cols=51 Identities=18% Similarity=0.087 Sum_probs=30.6
Q ss_pred eEecChHHhhcCCCEEEEeeC-Cc---------------cHHHHHHhhccccCCCCEEEEecCCCcH
Q psy6714 165 KITFDNKEVTLNSEVIILAVK-PH---------------IVPVALNDIKPVFNESNLLISVAGGVPI 215 (303)
Q Consensus 165 ~v~~d~~eav~~ADIVILAVp-P~---------------~v~~VL~eI~~~L~~g~IVVSiaaGV~i 215 (303)
.+..+..+.+++||+||++-- |+ .+.++++.+..+-.++..||-+.+++++
T Consensus 68 ~~~~~~~~~~~daDvVvitAg~prkpG~tR~dll~~N~~i~~~i~~~i~~~~~~~~~vivvsNPvd~ 134 (333)
T 5mdh_A 68 IATDKEEIAFKDLDVAILVGSMPRRDGMERKDLLKANVKIFKCQGAALDKYAKKSVKVIVVGNPANT 134 (333)
T ss_dssp EEESCHHHHTTTCSEEEECCSCCCCTTCCTTTTHHHHHHHHHHHHHHHHHHSCTTCEEEECSSSHHH
T ss_pred EEcCCcHHHhCCCCEEEEeCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEEcCCchHH
Confidence 344566778999999999861 21 1344555565544334335556677665
No 338
>1hye_A L-lactate/malate dehydrogenase; nucleotide binding domain, oxidoreductase; HET: NAP; 1.90A {Methanocaldococcus jannaschii} SCOP: c.2.1.5 d.162.1.1 PDB: 1hyg_A*
Probab=82.73 E-value=1.2 Score=40.93 Aligned_cols=95 Identities=15% Similarity=0.165 Sum_probs=51.6
Q ss_pred CcEEEEcC-ChhhHHHHHHHH------------hh--cHHHH-------h----hC--CCeEec-C--hHHhhcCCCEEE
Q psy6714 133 SDKQIAGT-TERGPGALIASL------------NI--VSKAT-------G----TM--GAKITF-D--NKEVTLNSEVII 181 (303)
Q Consensus 133 mkIgIIGl-G~MG~~~La~al------------~r--~~e~l-------~----e~--Gv~v~~-d--~~eav~~ADIVI 181 (303)
|||.|+|. |.+|.+ |+..+ +. ..+++ . .. .+.+.. + ..+++++||+||
T Consensus 1 mKI~V~GaaG~vG~~-l~~~L~~~~~~~el~L~Di~~~~~~~~~~~~dl~~~~~~~~~~~~i~~~~d~l~~al~gaD~Vi 79 (313)
T 1hye_A 1 MKVTIIGASGRVGSA-TALLLAKEPFMKDLVLIGREHSINKLEGLREDIYDALAGTRSDANIYVESDENLRIIDESDVVI 79 (313)
T ss_dssp CEEEEETTTSHHHHH-HHHHHHTCTTCCEEEEEECGGGHHHHHHHHHHHHHHHTTSCCCCEEEEEETTCGGGGTTCSEEE
T ss_pred CEEEEECCCChhHHH-HHHHHHhCCCCCEEEEEcCCCchhhhHHHHHHHHHhHHhcCCCeEEEeCCcchHHHhCCCCEEE
Confidence 79999998 999994 54331 11 21111 1 11 224432 2 367899999999
Q ss_pred EeeC-Cc----c-----------HHHHHHhhccccCCCCEEEEecCCCcHH--HHHhh--CCCCCceEEE
Q psy6714 182 LAVK-PH----I-----------VPVALNDIKPVFNESNLLISVAGGVPIK--NMEQA--LPKNSRIIRA 231 (303)
Q Consensus 182 LAVp-P~----~-----------v~~VL~eI~~~L~~g~IVVSiaaGV~ie--~L~~~--l~~~~~VVr~ 231 (303)
++-- |. . +.++++.+..+- +.+|+-..+++.+- .+.+. ++. .+++.+
T Consensus 80 ~~Ag~~~~~g~~r~dl~~~N~~i~~~i~~~i~~~~--~~~vlv~SNPv~~~t~~~~k~~~~p~-~rviG~ 146 (313)
T 1hye_A 80 ITSGVPRKEGMSRMDLAKTNAKIVGKYAKKIAEIC--DTKIFVITNPVDVMTYKALVDSKFER-NQVFGL 146 (313)
T ss_dssp ECCSCCCCTTCCHHHHHHHHHHHHHHHHHHHHHHC--CCEEEECSSSHHHHHHHHHHHHCCCT-TSEEEC
T ss_pred ECCCCCCCCCCcHHHHHHHHHHHHHHHHHHHHHhC--CeEEEEecCcHHHHHHHHHHhhCcCh-hcEEEe
Confidence 9872 21 1 123334444433 55666566777652 33343 442 355555
No 339
>4b4u_A Bifunctional protein fold; oxidoreductase; HET: NAP; 1.45A {Acinetobacter baumannii atcc 19606} PDB: 4b4v_A* 4b4w_A*
Probab=80.85 E-value=3.6 Score=38.37 Aligned_cols=68 Identities=16% Similarity=0.249 Sum_probs=45.1
Q ss_pred CCCcEEEEcCC-hhhHHHHHHHHhhcHHHHhhCCCeE------ecChHHhhcCCCEEEEee-CCccHHHHHHhhccccCC
Q psy6714 131 NRSDKQIAGTT-ERGPGALIASLNIVSKATGTMGAKI------TFDNKEVTLNSEVIILAV-KPHIVPVALNDIKPVFNE 202 (303)
Q Consensus 131 ~~mkIgIIGlG-~MG~~~La~al~r~~e~l~e~Gv~v------~~d~~eav~~ADIVILAV-pP~~v~~VL~eI~~~L~~ 202 (303)
..+++.|||-+ .+|.++..+. ...|.++ +.|..+..++|||||.++ +|..+. .+++++
T Consensus 178 ~Gk~vvViGRS~iVGkPla~LL--------~~~~ATVTi~Hs~T~dl~~~~~~ADIvV~A~G~p~~i~------~d~vk~ 243 (303)
T 4b4u_A 178 AGKHAVVVGRSAILGKPMAMML--------LQANATVTICHSRTQNLPELVKQADIIVGAVGKAELIQ------KDWIKQ 243 (303)
T ss_dssp TTCEEEEECCCTTTHHHHHHHH--------HHTTCEEEEECTTCSSHHHHHHTCSEEEECSCSTTCBC------GGGSCT
T ss_pred CCCEEEEEeccccccchHHHHH--------HhcCCEEEEecCCCCCHHHHhhcCCeEEeccCCCCccc------cccccC
Confidence 45789999955 5577633222 2234543 246678899999999999 566432 345778
Q ss_pred CCEEEEecCCCc
Q psy6714 203 SNLLISVAGGVP 214 (303)
Q Consensus 203 g~IVVSiaaGV~ 214 (303)
|.+||.+ |+.
T Consensus 244 GavVIDV--Gin 253 (303)
T 4b4u_A 244 GAVVVDA--GFH 253 (303)
T ss_dssp TCEEEEC--CCB
T ss_pred CCEEEEe--cee
Confidence 9988865 554
No 340
>1nyt_A Shikimate 5-dehydrogenase; alpha/beta domains, WIDE cleft separation, oxidoreductase; HET: NAP; 1.50A {Escherichia coli} SCOP: c.2.1.7 c.58.1.5
Probab=80.14 E-value=2.3 Score=38.05 Aligned_cols=77 Identities=14% Similarity=0.132 Sum_probs=40.9
Q ss_pred CCcEEEEcCChhhHHHHHHHH----------hhcHHHH----hhCCC--eE-ecChHHhh-cCCCEEEEeeCCccHHHHH
Q psy6714 132 RSDKQIAGTTERGPGALIASL----------NIVSKAT----GTMGA--KI-TFDNKEVT-LNSEVIILAVKPHIVPVAL 193 (303)
Q Consensus 132 ~mkIgIIGlG~MG~~~La~al----------~r~~e~l----~e~Gv--~v-~~d~~eav-~~ADIVILAVpP~~v~~VL 193 (303)
.+++.|+|.|.||.+ ++..+ +++.+++ .+++. .+ ..+..++. ..+|+||-|++.....++
T Consensus 119 ~k~vlViGaGg~g~a-~a~~L~~~G~~V~v~~R~~~~~~~la~~~~~~~~~~~~~~~~~~~~~~DivVn~t~~~~~~~~- 196 (271)
T 1nyt_A 119 GLRILLIGAGGASRG-VLLPLLSLDCAVTITNRTVSRAEELAKLFAHTGSIQALSMDELEGHEFDLIINATSSGISGDI- 196 (271)
T ss_dssp TCEEEEECCSHHHHH-HHHHHHHTTCEEEEECSSHHHHHHHHHHTGGGSSEEECCSGGGTTCCCSEEEECCSCGGGTCC-
T ss_pred CCEEEEECCcHHHHH-HHHHHHHcCCEEEEEECCHHHHHHHHHHhhccCCeeEecHHHhccCCCCEEEECCCCCCCCCC-
Confidence 568999999999994 44332 2232222 12221 11 23333333 489999999975432211
Q ss_pred Hhhc-cccCCCCEEEEec
Q psy6714 194 NDIK-PVFNESNLLISVA 210 (303)
Q Consensus 194 ~eI~-~~L~~g~IVVSia 210 (303)
..+. ..+.++.+|+.+.
T Consensus 197 ~~i~~~~l~~~~~v~D~~ 214 (271)
T 1nyt_A 197 PAIPSSLIHPGIYCYDMF 214 (271)
T ss_dssp CCCCGGGCCTTCEEEESC
T ss_pred CCCCHHHcCCCCEEEEec
Confidence 1121 2345677777653
No 341
>2csu_A 457AA long hypothetical protein; structural genomics, PH0766, riken ST genomics/proteomics initiative, RSGI, NPPSFA; 2.20A {Pyrococcus horikoshii} SCOP: c.2.1.8 c.23.4.1 c.23.4.1
Probab=79.58 E-value=1.3 Score=43.24 Aligned_cols=79 Identities=14% Similarity=0.168 Sum_probs=52.5
Q ss_pred CCcEEEEcCC----hhhHHHHHHHHhhcH-H-------HH-hhCCCeEecChHHhhcCCCEEEEeeCCccHHHHHHhhcc
Q psy6714 132 RSDKQIAGTT----ERGPGALIASLNIVS-K-------AT-GTMGAKITFDNKEVTLNSEVIILAVKPHIVPVALNDIKP 198 (303)
Q Consensus 132 ~mkIgIIGlG----~MG~~~La~al~r~~-e-------~l-~e~Gv~v~~d~~eav~~ADIVILAVpP~~v~~VL~eI~~ 198 (303)
..+|+|||.+ .+|. .+...+.... . +. .-.|+.+..+..++-+..|+++++||+..+.++++++..
T Consensus 8 p~siAVvGas~~~~~~g~-~v~~~l~~~g~~~v~pVnP~~~~i~G~~~y~sl~~lp~~~Dlavi~vp~~~~~~~v~e~~~ 86 (457)
T 2csu_A 8 PKGIAVIGASNDPKKLGY-EVFKNLKEYKKGKVYPVNIKEEEVQGVKAYKSVKDIPDEIDLAIIVVPKRFVKDTLIQCGE 86 (457)
T ss_dssp CSEEEEETCCSCTTSHHH-HHHHHHTTCCSSEEEEECSSCSEETTEECBSSTTSCSSCCSEEEECSCHHHHHHHHHHHHH
T ss_pred CCeEEEECcCCCCCchHH-HHHHHHHHcCCCEEEEECCCCCeECCEeccCCHHHcCCCCCEEEEecCHHHHHHHHHHHHH
Confidence 3579999987 6777 4544443321 1 00 114666667777777789999999999999999988764
Q ss_pred ccCCCCEEEEecCCC
Q psy6714 199 VFNESNLLISVAGGV 213 (303)
Q Consensus 199 ~L~~g~IVVSiaaGV 213 (303)
. .- +.+|-+..|+
T Consensus 87 ~-Gi-~~vv~~s~G~ 99 (457)
T 2csu_A 87 K-GV-KGVVIITAGF 99 (457)
T ss_dssp H-TC-CEEEECCCSS
T ss_pred c-CC-CEEEEecCCC
Confidence 3 12 3344466676
No 342
>1ff9_A Saccharopine reductase; lysine biosynthesis, alpha-aminoadipate pathway, dehydrogenase, oxidoreductase; 2.00A {Magnaporthe grisea} SCOP: c.2.1.3 d.81.1.2 PDB: 1e5l_A* 1e5q_A
Probab=79.56 E-value=2.4 Score=41.11 Aligned_cols=60 Identities=5% Similarity=-0.028 Sum_probs=34.6
Q ss_pred CCcEEEEcCChhhHHHHHHHHh----------hcHHHHh----hCC-CeE----ec---ChHHhhcCCCEEEEeeCCccH
Q psy6714 132 RSDKQIAGTTERGPGALIASLN----------IVSKATG----TMG-AKI----TF---DNKEVTLNSEVIILAVKPHIV 189 (303)
Q Consensus 132 ~mkIgIIGlG~MG~~~La~al~----------r~~e~l~----e~G-v~v----~~---d~~eav~~ADIVILAVpP~~v 189 (303)
+++|.|+|+|.||.+ ++..+. +..+++. ..+ +.. .. +..++++++|+||.|+++...
T Consensus 3 ~k~VlViGaG~iG~~-ia~~L~~~G~~V~v~~R~~~~a~~la~~~~~~~~~~~Dv~d~~~l~~~l~~~DvVIn~a~~~~~ 81 (450)
T 1ff9_A 3 TKSVLMLGSGFVTRP-TLDVLTDSGIKVTVACRTLESAKKLSAGVQHSTPISLDVNDDAALDAEVAKHDLVISLIPYTFH 81 (450)
T ss_dssp CCEEEEECCSTTHHH-HHHHHHTTTCEEEEEESSHHHHHHTTTTCTTEEEEECCTTCHHHHHHHHTTSSEEEECCC--CH
T ss_pred CCEEEEECCCHHHHH-HHHHHHhCcCEEEEEECCHHHHHHHHHhcCCceEEEeecCCHHHHHHHHcCCcEEEECCccccc
Confidence 468999999999994 554431 2223332 122 221 11 223567789999999987554
Q ss_pred HHH
Q psy6714 190 PVA 192 (303)
Q Consensus 190 ~~V 192 (303)
..+
T Consensus 82 ~~i 84 (450)
T 1ff9_A 82 ATV 84 (450)
T ss_dssp HHH
T ss_pred hHH
Confidence 444
No 343
>3dfz_A SIRC, precorrin-2 dehydrogenase; NAD dehydrogenase, cobalamin biosynthesis, NAD, oxidoreducta porphyrin biosynthesis; 2.30A {Bacillus megaterium}
Probab=79.46 E-value=6.2 Score=34.90 Aligned_cols=67 Identities=13% Similarity=0.049 Sum_probs=40.9
Q ss_pred cCCCcEEEEcCChhhHHHHHHHHhh-----------c---HHHHhh-CCCeEecC--hHHhhcCCCEEEEeeCCccHHHH
Q psy6714 130 WNRSDKQIAGTTERGPGALIASLNI-----------V---SKATGT-MGAKITFD--NKEVTLNSEVIILAVKPHIVPVA 192 (303)
Q Consensus 130 ~~~mkIgIIGlG~MG~~~La~al~r-----------~---~e~l~e-~Gv~v~~d--~~eav~~ADIVILAVpP~~v~~V 192 (303)
+..+++.|||.|.+|.. .+..+-. . .+.+.+ .++.+... ..+.++++|+||.|+....+...
T Consensus 29 L~gk~VLVVGgG~va~~-ka~~Ll~~GA~VtVvap~~~~~l~~l~~~~~i~~i~~~~~~~dL~~adLVIaAT~d~~~N~~ 107 (223)
T 3dfz_A 29 LKGRSVLVVGGGTIATR-RIKGFLQEGAAITVVAPTVSAEINEWEAKGQLRVKRKKVGEEDLLNVFFIVVATNDQAVNKF 107 (223)
T ss_dssp CTTCCEEEECCSHHHHH-HHHHHGGGCCCEEEECSSCCHHHHHHHHTTSCEEECSCCCGGGSSSCSEEEECCCCTHHHHH
T ss_pred cCCCEEEEECCCHHHHH-HHHHHHHCCCEEEEECCCCCHHHHHHHHcCCcEEEECCCCHhHhCCCCEEEECCCCHHHHHH
Confidence 45689999999999983 3333211 0 112222 23543211 12446789999999987777776
Q ss_pred HHhhc
Q psy6714 193 LNDIK 197 (303)
Q Consensus 193 L~eI~ 197 (303)
+....
T Consensus 108 I~~~a 112 (223)
T 3dfz_A 108 VKQHI 112 (223)
T ss_dssp HHHHS
T ss_pred HHHHH
Confidence 66554
No 344
>1c1d_A L-phenylalanine dehydrogenase; amino acid dehydrogenase, oxidative deamination mechanism, oxidoreductase; HET: PHE NAD; 1.25A {Rhodococcus SP} SCOP: c.2.1.7 c.58.1.1 PDB: 1bw9_A* 1c1x_A* 1bw9_B* 1c1d_B* 1c1x_B* 1bxg_B* 1bxg_A*
Probab=79.34 E-value=3.8 Score=38.84 Aligned_cols=77 Identities=10% Similarity=0.114 Sum_probs=45.5
Q ss_pred cCCCcEEEEcCChhhHHHHHHHHh----------hc---HHHHhhCCCeEecChHHhhc-CCCEEEEeeCCccHH-HHHH
Q psy6714 130 WNRSDKQIAGTTERGPGALIASLN----------IV---SKATGTMGAKITFDNKEVTL-NSEVIILAVKPHIVP-VALN 194 (303)
Q Consensus 130 ~~~mkIgIIGlG~MG~~~La~al~----------r~---~e~l~e~Gv~v~~d~~eav~-~ADIVILAVpP~~v~-~VL~ 194 (303)
+..++++|+|+|++|. .++..+. .. .+...++|++.. ++.+++. +|||++.|-....+. +.+.
T Consensus 173 L~GktV~I~G~GnVG~-~~A~~l~~~GakVvvsD~~~~~~~~a~~~ga~~v-~~~ell~~~~DIliP~A~~~~I~~~~~~ 250 (355)
T 1c1d_A 173 LDGLTVLVQGLGAVGG-SLASLAAEAGAQLLVADTDTERVAHAVALGHTAV-ALEDVLSTPCDVFAPCAMGGVITTEVAR 250 (355)
T ss_dssp STTCEEEEECCSHHHH-HHHHHHHHTTCEEEEECSCHHHHHHHHHTTCEEC-CGGGGGGCCCSEEEECSCSCCBCHHHHH
T ss_pred CCCCEEEEECcCHHHH-HHHHHHHHCCCEEEEEeCCccHHHHHHhcCCEEe-ChHHhhcCccceecHhHHHhhcCHHHHh
Confidence 4568999999999998 4544321 11 122335676653 5556666 899998764443332 3333
Q ss_pred hhccccCCCCEEEEecCCC
Q psy6714 195 DIKPVFNESNLLISVAGGV 213 (303)
Q Consensus 195 eI~~~L~~g~IVVSiaaGV 213 (303)
. ++ .++||-.+++-
T Consensus 251 ~----lk-~~iVie~AN~p 264 (355)
T 1c1d_A 251 T----LD-CSVVAGAANNV 264 (355)
T ss_dssp H----CC-CSEECCSCTTC
T ss_pred h----CC-CCEEEECCCCC
Confidence 3 32 46777666554
No 345
>3gd5_A Otcase, ornithine carbamoyltransferase; structural genomics, NYSGXRC, target 9454P, operon, amino-acid biosynthesis, ARGI biosynthesis; 2.10A {Gloeobacter violaceus}
Probab=79.22 E-value=3.4 Score=38.80 Aligned_cols=55 Identities=20% Similarity=0.218 Sum_probs=35.6
Q ss_pred ccCCCcEEEEc-CChhhHHHHHHHHhhc------------------HH----HHhhCC--CeEecChHHhhcCCCEEEEe
Q psy6714 129 RWNRSDKQIAG-TTERGPGALIASLNIV------------------SK----ATGTMG--AKITFDNKEVTLNSEVIILA 183 (303)
Q Consensus 129 ~~~~mkIgIIG-lG~MG~~~La~al~r~------------------~e----~l~e~G--v~v~~d~~eav~~ADIVILA 183 (303)
++...||+||| .++|.. +++..+... .+ .+++.| +.++.|+.++++++|||..-
T Consensus 154 ~l~glkva~vGD~~rva~-Sl~~~~~~~G~~v~~~~P~~~~~~~~~~~~~~~~a~~~g~~v~~~~d~~eav~~aDvvyt~ 232 (323)
T 3gd5_A 154 RLAGLKLAYVGDGNNVAH-SLLLGCAKVGMSIAVATPEGFTPDPAVSARASEIAGRTGAEVQILRDPFEAARGAHILYTD 232 (323)
T ss_dssp CCTTCEEEEESCCCHHHH-HHHHHHHHHTCEEEEECCTTCCCCHHHHHHHHHHHHHHTCCEEEESCHHHHHTTCSEEEEC
T ss_pred CCCCCEEEEECCCCcHHH-HHHHHHHHcCCEEEEECCCcccCCHHHHHHHHHHHHHcCCeEEEECCHHHHhcCCCEEEEe
Confidence 45678999999 556666 555442110 01 122345 56778999999999998765
Q ss_pred e
Q psy6714 184 V 184 (303)
Q Consensus 184 V 184 (303)
+
T Consensus 233 ~ 233 (323)
T 3gd5_A 233 V 233 (323)
T ss_dssp C
T ss_pred c
Confidence 4
No 346
>4ep1_A Otcase, ornithine carbamoyltransferase; structural genomics, niaid, national institute of allergy AN infectious diseases; 3.25A {Bacillus anthracis}
Probab=78.41 E-value=3.7 Score=38.84 Aligned_cols=55 Identities=15% Similarity=0.148 Sum_probs=35.8
Q ss_pred ccCCCcEEEEc-CChhhHHHHHHHHhhc------------------HH----HHhhCC--CeEecChHHhhcCCCEEEEe
Q psy6714 129 RWNRSDKQIAG-TTERGPGALIASLNIV------------------SK----ATGTMG--AKITFDNKEVTLNSEVIILA 183 (303)
Q Consensus 129 ~~~~mkIgIIG-lG~MG~~~La~al~r~------------------~e----~l~e~G--v~v~~d~~eav~~ADIVILA 183 (303)
++...||+||| .+++.. +++..+.+. .+ .+++.| +.++.|+.++++++|+|..-
T Consensus 176 ~l~glkva~vGD~~nva~-Sl~~~~~~~G~~v~~~~P~~~~~~~~~~~~~~~~a~~~G~~v~~~~d~~eav~~aDVvyt~ 254 (340)
T 4ep1_A 176 TFKGIKLAYVGDGNNVCH-SLLLASAKVGMHMTVATPVGYRPNEEIVKKALAIAKETGAEIEILHNPELAVNEADFIYTD 254 (340)
T ss_dssp CCTTCEEEEESCCCHHHH-HHHHHHHHHTCEEEEECCTTCCCCHHHHHHHHHHHHHHCCCEEEESCHHHHHTTCSEEEEC
T ss_pred CCCCCEEEEECCCchhHH-HHHHHHHHcCCEEEEECCcccCCCHHHHHHHHHHHHHcCCeEEEECCHHHHhCCCCEEEec
Confidence 45678999999 456665 555442110 01 123456 45678999999999999875
Q ss_pred e
Q psy6714 184 V 184 (303)
Q Consensus 184 V 184 (303)
+
T Consensus 255 ~ 255 (340)
T 4ep1_A 255 V 255 (340)
T ss_dssp C
T ss_pred C
Confidence 4
No 347
>2g82_O GAPDH, glyceraldehyde-3-phosphate dehydrogenase; G3PDH, glycolysis, oxidoreductase, NAD, rossmann fold; HET: NAD PGE; 1.65A {Thermus aquaticus} SCOP: c.2.1.3 d.81.1.1 PDB: 1cer_O* 1vc2_A*
Probab=78.24 E-value=1.5 Score=41.25 Aligned_cols=32 Identities=9% Similarity=0.025 Sum_probs=21.6
Q ss_pred CCCEEEEeeCCccHHHHHHhhccccCCCC--EEEEec
Q psy6714 176 NSEVIILAVKPHIVPVALNDIKPVFNESN--LLISVA 210 (303)
Q Consensus 176 ~ADIVILAVpP~~v~~VL~eI~~~L~~g~--IVVSia 210 (303)
++|+||.|++...-.+....... .|. +|||..
T Consensus 86 gvDiV~estG~~~s~e~a~~~l~---aGakkvVIsap 119 (331)
T 2g82_O 86 GVGVVIESTGVFTDADKAKAHLE---GGAKKVIITAP 119 (331)
T ss_dssp TEEEEEECSSSCCBHHHHTHHHH---TTCSEEEESSC
T ss_pred CCCEEEECCCchhhHHHHHHHHH---CCCCEEEECCC
Confidence 68999999987777666655432 333 777543
No 348
>3ius_A Uncharacterized conserved protein; APC63810, silicibacter pomeroyi DSS, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.66A {Ruegeria pomeroyi dss-3}
Probab=78.14 E-value=3.6 Score=35.87 Aligned_cols=55 Identities=15% Similarity=0.104 Sum_probs=33.0
Q ss_pred CCCcEEEEcCChhhHHHHHHHHhh----------cH---HHHhhCCCeEe-cChHHh-hcCCCEEEEeeCC
Q psy6714 131 NRSDKQIAGTTERGPGALIASLNI----------VS---KATGTMGAKIT-FDNKEV-TLNSEVIILAVKP 186 (303)
Q Consensus 131 ~~mkIgIIGlG~MG~~~La~al~r----------~~---e~l~e~Gv~v~-~d~~ea-v~~ADIVILAVpP 186 (303)
+||||.|.|.|.+|. .|+..+.. .. ..+...++... .|..++ ++++|+||-+..+
T Consensus 4 m~~~ilVtGaG~iG~-~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~D~~d~~~~~~d~vi~~a~~ 73 (286)
T 3ius_A 4 MTGTLLSFGHGYTAR-VLSRALAPQGWRIIGTSRNPDQMEAIRASGAEPLLWPGEEPSLDGVTHLLISTAP 73 (286)
T ss_dssp -CCEEEEETCCHHHH-HHHHHHGGGTCEEEEEESCGGGHHHHHHTTEEEEESSSSCCCCTTCCEEEECCCC
T ss_pred CcCcEEEECCcHHHH-HHHHHHHHCCCEEEEEEcChhhhhhHhhCCCeEEEecccccccCCCCEEEECCCc
Confidence 578999999999999 46655321 11 12333455432 221111 6789999999853
No 349
>1pjc_A Protein (L-alanine dehydrogenase); oxidoreductase, NAD; HET: NAD; 2.00A {Phormidium lapideum} SCOP: c.2.1.4 c.23.12.2 PDB: 1pjb_A* 1say_A
Probab=77.29 E-value=2.1 Score=40.04 Aligned_cols=74 Identities=14% Similarity=0.105 Sum_probs=41.5
Q ss_pred CCcEEEEcCChhhHHHHHHHH----------hhcHHH---HhhCC---CeEe----cChHHhhcCCCEEEEeeCCcc---
Q psy6714 132 RSDKQIAGTTERGPGALIASL----------NIVSKA---TGTMG---AKIT----FDNKEVTLNSEVIILAVKPHI--- 188 (303)
Q Consensus 132 ~mkIgIIGlG~MG~~~La~al----------~r~~e~---l~e~G---v~v~----~d~~eav~~ADIVILAVpP~~--- 188 (303)
..++.|+|.|.+|.. ++..+ ++..++ +.+.| +.+. .+..+.+..+|+||-|+....
T Consensus 167 ~~~VlViGaGgvG~~-aa~~a~~~Ga~V~v~dr~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~DvVI~~~~~~~~~~ 245 (361)
T 1pjc_A 167 PGKVVILGGGVVGTE-AAKMAVGLGAQVQIFDINVERLSYLETLFGSRVELLYSNSAEIETAVAEADLLIGAVLVPGRRA 245 (361)
T ss_dssp CCEEEEECCSHHHHH-HHHHHHHTTCEEEEEESCHHHHHHHHHHHGGGSEEEECCHHHHHHHHHTCSEEEECCCCTTSSC
T ss_pred CCEEEEECCCHHHHH-HHHHHHhCCCEEEEEeCCHHHHHHHHHhhCceeEeeeCCHHHHHHHHcCCCEEEECCCcCCCCC
Confidence 468999999999984 43332 222222 22322 2111 123456678999999995322
Q ss_pred ----HHHHHHhhccccCCCCEEEEec
Q psy6714 189 ----VPVALNDIKPVFNESNLLISVA 210 (303)
Q Consensus 189 ----v~~VL~eI~~~L~~g~IVVSia 210 (303)
..+.++ .++++.+||.+.
T Consensus 246 ~~li~~~~~~----~~~~g~~ivdv~ 267 (361)
T 1pjc_A 246 PILVPASLVE----QMRTGSVIVDVA 267 (361)
T ss_dssp CCCBCHHHHT----TSCTTCEEEETT
T ss_pred CeecCHHHHh----hCCCCCEEEEEe
Confidence 333333 345667777553
No 350
>3e8x_A Putative NAD-dependent epimerase/dehydratase; structural genomics, APC7755, NADP, P protein structure initiative; HET: MSE NAP; 2.10A {Bacillus halodurans}
Probab=77.29 E-value=5.4 Score=33.83 Aligned_cols=56 Identities=14% Similarity=0.170 Sum_probs=34.2
Q ss_pred cCCCcEEEEc-CChhhHHHHHHHHh----------hcHH---HHhhCCC-eEe-----cChHHhhcCCCEEEEeeCC
Q psy6714 130 WNRSDKQIAG-TTERGPGALIASLN----------IVSK---ATGTMGA-KIT-----FDNKEVTLNSEVIILAVKP 186 (303)
Q Consensus 130 ~~~mkIgIIG-lG~MG~~~La~al~----------r~~e---~l~e~Gv-~v~-----~d~~eav~~ADIVILAVpP 186 (303)
+..|+|.|.| .|.+|.+ ++..+- +..+ .+...++ .+. .+..++++.+|+||.+.-.
T Consensus 19 l~~~~ilVtGatG~iG~~-l~~~L~~~G~~V~~~~R~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~D~vi~~ag~ 94 (236)
T 3e8x_A 19 FQGMRVLVVGANGKVARY-LLSELKNKGHEPVAMVRNEEQGPELRERGASDIVVANLEEDFSHAFASIDAVVFAAGS 94 (236)
T ss_dssp --CCEEEEETTTSHHHHH-HHHHHHHTTCEEEEEESSGGGHHHHHHTTCSEEEECCTTSCCGGGGTTCSEEEECCCC
T ss_pred cCCCeEEEECCCChHHHH-HHHHHHhCCCeEEEEECChHHHHHHHhCCCceEEEcccHHHHHHHHcCCCEEEECCCC
Confidence 4578999998 5999994 655431 1112 2333455 432 2345677889999998853
No 351
>1pvv_A Otcase, ornithine carbamoyltransferase; dodecamer; 1.87A {Pyrococcus furiosus} SCOP: c.78.1.1 c.78.1.1 PDB: 1a1s_A
Probab=77.27 E-value=4.2 Score=37.99 Aligned_cols=56 Identities=14% Similarity=0.160 Sum_probs=37.3
Q ss_pred cccCCCcEEEEcC-ChhhHHHHHHHHhhc------------------HH----HHhhCC--CeEecChHHhhcCCCEEEE
Q psy6714 128 ARWNRSDKQIAGT-TERGPGALIASLNIV------------------SK----ATGTMG--AKITFDNKEVTLNSEVIIL 182 (303)
Q Consensus 128 ~~~~~mkIgIIGl-G~MG~~~La~al~r~------------------~e----~l~e~G--v~v~~d~~eav~~ADIVIL 182 (303)
+++...||+|||= +++.. +++..+.+. .+ .+++.| +.++.|+.++++++|+|..
T Consensus 151 g~l~gl~va~vGD~~rva~-Sl~~~~~~~g~~v~~~~P~~~~~~~~~~~~~~~~a~~~g~~~~~~~d~~eav~~aDvvy~ 229 (315)
T 1pvv_A 151 GTIKGVKVVYVGDGNNVAH-SLMIAGTKLGADVVVATPEGYEPDEKVIKWAEQNAAESGGSFELLHDPVKAVKDADVIYT 229 (315)
T ss_dssp SCCTTCEEEEESCCCHHHH-HHHHHHHHTTCEEEEECCTTCCCCHHHHHHHHHHHHHHTCEEEEESCHHHHTTTCSEEEE
T ss_pred CCcCCcEEEEECCCcchHH-HHHHHHHHCCCEEEEECCccccCCHHHHHHHHHHHHHcCCeEEEEeCHHHHhCCCCEEEE
Confidence 3456789999995 67776 565543211 01 122567 4567899999999999988
Q ss_pred ee
Q psy6714 183 AV 184 (303)
Q Consensus 183 AV 184 (303)
-+
T Consensus 230 ~~ 231 (315)
T 1pvv_A 230 DV 231 (315)
T ss_dssp CC
T ss_pred cc
Confidence 54
No 352
>1jw9_B Molybdopterin biosynthesis MOEB protein; MOEB: modified rossmann fold, (2) Cys-X-X-Cys zinc-binding M MOAD: ubiquitin-like fold; 1.70A {Escherichia coli} SCOP: c.111.1.1 PDB: 1jwa_B* 1jwb_B*
Probab=76.46 E-value=2.8 Score=37.21 Aligned_cols=25 Identities=12% Similarity=0.157 Sum_probs=17.2
Q ss_pred HHhhcCCCEEEEeeCCccHHHHHHh
Q psy6714 171 KEVTLNSEVIILAVKPHIVPVALND 195 (303)
Q Consensus 171 ~eav~~ADIVILAVpP~~v~~VL~e 195 (303)
.+.++++|+||.|+........+..
T Consensus 116 ~~~~~~~DvVi~~~d~~~~~~~l~~ 140 (249)
T 1jw9_B 116 AALIAEHDLVLDCTDNVAVRNQLNA 140 (249)
T ss_dssp HHHHHTSSEEEECCSSHHHHHHHHH
T ss_pred HHHHhCCCEEEEeCCCHHHHHHHHH
Confidence 3567789999999976555544444
No 353
>3jyo_A Quinate/shikimate dehydrogenase; enzyme-cofactor complex, amino-acid biosynthesis, aromatic A biosynthesis, NAD, oxidoreductase; HET: NAD; 1.00A {Corynebacterium glutamicum} PDB: 3jyp_A* 3jyq_A* 2nlo_A
Probab=76.09 E-value=3.2 Score=37.79 Aligned_cols=107 Identities=8% Similarity=0.041 Sum_probs=55.2
Q ss_pred CCcEEEEcCChhhHHHHHHHH-----------hhcHHHH-------hhC--C--CeEec--ChHHhhcCCCEEEEeeCCc
Q psy6714 132 RSDKQIAGTTERGPGALIASL-----------NIVSKAT-------GTM--G--AKITF--DNKEVTLNSEVIILAVKPH 187 (303)
Q Consensus 132 ~mkIgIIGlG~MG~~~La~al-----------~r~~e~l-------~e~--G--v~v~~--d~~eav~~ADIVILAVpP~ 187 (303)
..++.|+|.|.+|.+ ++..+ +++.+++ ... + +.... +..+.+.++|+||-|+|..
T Consensus 127 ~k~vlVlGaGG~g~a-ia~~L~~~G~~~v~i~~R~~~~a~~la~~~~~~~~~~~i~~~~~~~l~~~l~~~DiVInaTp~G 205 (283)
T 3jyo_A 127 LDSVVQVGAGGVGNA-VAYALVTHGVQKLQVADLDTSRAQALADVINNAVGREAVVGVDARGIEDVIAAADGVVNATPMG 205 (283)
T ss_dssp CSEEEEECCSHHHHH-HHHHHHHTTCSEEEEECSSHHHHHHHHHHHHHHHTSCCEEEECSTTHHHHHHHSSEEEECSSTT
T ss_pred CCEEEEECCcHHHHH-HHHHHHHCCCCEEEEEECCHHHHHHHHHHHHhhcCCceEEEcCHHHHHHHHhcCCEEEECCCCC
Confidence 567999999999984 44332 2222222 111 2 22333 5566778899999999742
Q ss_pred cHHHHHHhh-ccccCCCCEEEEec-CCCcHHHHHhhCCCCCceEEEecCcHHhhhCC
Q psy6714 188 IVPVALNDI-KPVFNESNLLISVA-GGVPIKNMEQALPKNSRIIRAMPNTPALVRQG 242 (303)
Q Consensus 188 ~v~~VL~eI-~~~L~~g~IVVSia-aGV~ie~L~~~l~~~~~VVr~mPn~p~~v~~G 242 (303)
.....-..+ ...++++.+|+.++ ++....-|+..-..++ +++....+.+.|+
T Consensus 206 m~~~~~~pi~~~~l~~~~~v~DlvY~P~~T~ll~~A~~~G~---~~~~Gl~MLv~Qa 259 (283)
T 3jyo_A 206 MPAHPGTAFDVSCLTKDHWVGDVVYMPIETELLKAARALGC---ETLDGTRMAIHQA 259 (283)
T ss_dssp STTSCSCSSCGGGCCTTCEEEECCCSSSSCHHHHHHHHHTC---CEECTHHHHHHHH
T ss_pred CCCCCCCCCCHHHhCCCCEEEEecCCCCCCHHHHHHHHCcC---eEeCcHHHHHHHH
Confidence 211100001 22455677777654 3333333333221122 4566667766654
No 354
>3ew7_A LMO0794 protein; Q8Y8U8_lismo, putative NAD-dependent epimerase/dehydratase, LMR162, NESG, structural genomics, PSI-2; 2.73A {Listeria monocytogenes}
Probab=76.06 E-value=4.9 Score=33.29 Aligned_cols=53 Identities=15% Similarity=0.065 Sum_probs=32.4
Q ss_pred CcEEEEc-CChhhHHHHHHHHh----------hcHHHHhh--CCCeEe-cCh----HHhhcCCCEEEEeeCC
Q psy6714 133 SDKQIAG-TTERGPGALIASLN----------IVSKATGT--MGAKIT-FDN----KEVTLNSEVIILAVKP 186 (303)
Q Consensus 133 mkIgIIG-lG~MG~~~La~al~----------r~~e~l~e--~Gv~v~-~d~----~eav~~ADIVILAVpP 186 (303)
|||.|+| .|.+|.. ++..+- +..+.+.+ .++.+. .|. .+++..+|+||.+...
T Consensus 1 MkvlVtGatG~iG~~-l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~d~vi~~ag~ 71 (221)
T 3ew7_A 1 MKIGIIGATGRAGSR-ILEEAKNRGHEVTAIVRNAGKITQTHKDINILQKDIFDLTLSDLSDQNVVVDAYGI 71 (221)
T ss_dssp CEEEEETTTSHHHHH-HHHHHHHTTCEEEEEESCSHHHHHHCSSSEEEECCGGGCCHHHHTTCSEEEECCCS
T ss_pred CeEEEEcCCchhHHH-HHHHHHhCCCEEEEEEcCchhhhhccCCCeEEeccccChhhhhhcCCCEEEECCcC
Confidence 7899998 7999994 655431 12222222 345432 221 2567889999999843
No 355
>3hn7_A UDP-N-acetylmuramate-L-alanine ligase; ATP-binding, nucleotide-binding, structural genomics, joint for structural genomics, JCSG; HET: MSE; 1.65A {Psychrobacter arcticus 273-4}
Probab=75.24 E-value=4.7 Score=39.70 Aligned_cols=58 Identities=14% Similarity=0.180 Sum_probs=37.4
Q ss_pred CCCcEEEEcCChhhHHHHHHHHhh---------------cHHHHhhCCCeEe--cChHHhhcCCCEEEEe--eCCcc
Q psy6714 131 NRSDKQIAGTTERGPGALIASLNI---------------VSKATGTMGAKIT--FDNKEVTLNSEVIILA--VKPHI 188 (303)
Q Consensus 131 ~~mkIgIIGlG~MG~~~La~al~r---------------~~e~l~e~Gv~v~--~d~~eav~~ADIVILA--VpP~~ 188 (303)
+.++|.|||.|..|-+.++..+.. ..+.+.+.|+.+. .+..++..++|+||++ +|+..
T Consensus 18 ~~~~i~~iGiGg~Gms~lA~~l~~~G~~V~~sD~~~~~~~~~~L~~~gi~~~~G~~~~~~~~~~d~vV~Spgi~~~~ 94 (524)
T 3hn7_A 18 QGMHIHILGICGTFMGSLALLARALGHTVTGSDANIYPPMSTQLEQAGVTIEEGYLIAHLQPAPDLVVVGNAMKRGM 94 (524)
T ss_dssp -CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCCCTTHHHHHHHTTCEEEESCCGGGGCSCCSEEEECTTCCTTS
T ss_pred cCCEEEEEEecHhhHHHHHHHHHhCCCEEEEECCCCCcHHHHHHHHCCCEEECCCCHHHcCCCCCEEEECCCcCCCC
Confidence 357899999999887445654321 1235667898764 3344444679999996 45543
No 356
>1vm6_A DHPR, dihydrodipicolinate reductase; TM1520, structural genomics, protein structure initiative, PSI, joint center for structu genomics; HET: NAD PG4; 2.27A {Thermotoga maritima} SCOP: c.2.1.3 d.81.1.3
Probab=74.67 E-value=6.3 Score=35.28 Aligned_cols=76 Identities=14% Similarity=0.173 Sum_probs=44.0
Q ss_pred CCcEEEEcC-ChhhHHHHHHHHhhcHHHHhhCCCeEe----cChHHhhcCCCEEEEeeCCccHHHHHHhhccccCCCCEE
Q psy6714 132 RSDKQIAGT-TERGPGALIASLNIVSKATGTMGAKIT----FDNKEVTLNSEVIILAVKPHIVPVALNDIKPVFNESNLL 206 (303)
Q Consensus 132 ~mkIgIIGl-G~MG~~~La~al~r~~e~l~e~Gv~v~----~d~~eav~~ADIVILAVpP~~v~~VL~eI~~~L~~g~IV 206 (303)
.||++|+|. |.||. ++.... .+.|..+. ....+.++++|+||=-+.|..+.+.++.... .+.-+
T Consensus 12 ~~~~~v~Ga~GrMG~-~i~~~~-------~~~~~elv~~id~~~~~~l~~~DVvIDFT~P~a~~~~~~~~~~---~g~~~ 80 (228)
T 1vm6_A 12 HMKYGIVGYSGRMGQ-EIQKVF-------SEKGHELVLKVDVNGVEELDSPDVVIDFSSPEALPKTVDLCKK---YRAGL 80 (228)
T ss_dssp CCEEEEETTTSHHHH-HHHHHH-------HHTTCEEEEEEETTEEEECSCCSEEEECSCGGGHHHHHHHHHH---HTCEE
T ss_pred cceeEEEEecCHHHH-HHHHHH-------hCCCCEEEEEEcCCCcccccCCCEEEECCCHHHHHHHHHHHHH---cCCCE
Confidence 699999995 99999 554321 12222211 1111223579998856667777777655433 34445
Q ss_pred EEecCCCcHHHH
Q psy6714 207 ISVAGGVPIKNM 218 (303)
Q Consensus 207 VSiaaGV~ie~L 218 (303)
|.-..|.+.+.+
T Consensus 81 ViGTTG~~~~~~ 92 (228)
T 1vm6_A 81 VLGTTALKEEHL 92 (228)
T ss_dssp EECCCSCCHHHH
T ss_pred EEeCCCCCHHHH
Confidence 555557876654
No 357
>3a06_A 1-deoxy-D-xylulose 5-phosphate reductoisomerase; MEP pathway, isoprene biosynthesis, metal- NADP, oxidoreductase; HET: NDP; 2.00A {Thermotoga maritima} PDB: 3a14_A*
Probab=74.28 E-value=6.4 Score=37.79 Aligned_cols=23 Identities=17% Similarity=0.312 Sum_probs=17.0
Q ss_pred cCCCEEEEeeC-CccHHHHHHhhc
Q psy6714 175 LNSEVIILAVK-PHIVPVALNDIK 197 (303)
Q Consensus 175 ~~ADIVILAVp-P~~v~~VL~eI~ 197 (303)
.++|+|+.|+. ...+..++..+.
T Consensus 84 ~~~D~Vv~AivG~aGL~ptlaAi~ 107 (376)
T 3a06_A 84 LKPDITMVAVSGFSGLRAVLASLE 107 (376)
T ss_dssp HCCSEEEECCCSTTHHHHHHHHHH
T ss_pred CCCCEEEEEeeCHHHHHHHHHHHH
Confidence 36899999986 666777776654
No 358
>3e48_A Putative nucleoside-diphosphate-sugar epimerase; alpha-beta protein., structural genomics, PSI-2, protein STR initiative; 1.60A {Staphylococcus aureus subsp}
Probab=74.25 E-value=6.5 Score=34.29 Aligned_cols=53 Identities=9% Similarity=0.077 Sum_probs=33.0
Q ss_pred CcEEEEc-CChhhHHHHHHHHhhc-----------HHH---HhhCCCeEe----cC---hHHhhcCCCEEEEeeCC
Q psy6714 133 SDKQIAG-TTERGPGALIASLNIV-----------SKA---TGTMGAKIT----FD---NKEVTLNSEVIILAVKP 186 (303)
Q Consensus 133 mkIgIIG-lG~MG~~~La~al~r~-----------~e~---l~e~Gv~v~----~d---~~eav~~ADIVILAVpP 186 (303)
|||.|.| +|.+|. .++..+... .++ +...|+.+. .| ..++++.+|+||.+..+
T Consensus 1 M~ilVtGatG~iG~-~l~~~L~~~~g~~V~~~~R~~~~~~~~~~~~v~~~~~D~~d~~~l~~~~~~~d~vi~~a~~ 75 (289)
T 3e48_A 1 MNIMLTGATGHLGT-HITNQAIANHIDHFHIGVRNVEKVPDDWRGKVSVRQLDYFNQESMVEAFKGMDTVVFIPSI 75 (289)
T ss_dssp CCEEEETTTSHHHH-HHHHHHHHTTCTTEEEEESSGGGSCGGGBTTBEEEECCTTCHHHHHHHTTTCSEEEECCCC
T ss_pred CEEEEEcCCchHHH-HHHHHHhhCCCCcEEEEECCHHHHHHhhhCCCEEEEcCCCCHHHHHHHHhCCCEEEEeCCC
Confidence 7899998 799999 455544321 111 223455432 12 34567899999999854
No 359
>1npy_A Hypothetical shikimate 5-dehydrogenase-like protein HI0607; structural genomics, PSI, protein structure initiative; 1.75A {Haemophilus influenzae} SCOP: c.2.1.7 c.58.1.5
Probab=74.22 E-value=4.5 Score=36.58 Aligned_cols=104 Identities=10% Similarity=0.152 Sum_probs=52.4
Q ss_pred CCcEEEEcCChhhHHHHHHHH-----------hhcHHHH----hhCCCeEecChHHhhcCCCEEEEeeCCccHH----HH
Q psy6714 132 RSDKQIAGTTERGPGALIASL-----------NIVSKAT----GTMGAKITFDNKEVTLNSEVIILAVKPHIVP----VA 192 (303)
Q Consensus 132 ~mkIgIIGlG~MG~~~La~al-----------~r~~e~l----~e~Gv~v~~d~~eav~~ADIVILAVpP~~v~----~V 192 (303)
.+++.|||+|.||.+ ++..+ +++.+++ .++|.....+.. +.++|+||-|+|..... +.
T Consensus 119 ~~~vlvlGaGgaara-v~~~L~~~G~~~i~v~nRt~~ka~~la~~~~~~~~~~~~--~~~~DivInaTp~gm~~~~~~~~ 195 (271)
T 1npy_A 119 NAKVIVHGSGGMAKA-VVAAFKNSGFEKLKIYARNVKTGQYLAALYGYAYINSLE--NQQADILVNVTSIGMKGGKEEMD 195 (271)
T ss_dssp TSCEEEECSSTTHHH-HHHHHHHTTCCCEEEECSCHHHHHHHHHHHTCEEESCCT--TCCCSEEEECSSTTCTTSTTTTS
T ss_pred CCEEEEECCcHHHHH-HHHHHHHCCCCEEEEEeCCHHHHHHHHHHcCCccchhhh--cccCCEEEECCCCCccCccccCC
Confidence 357999999999994 44332 2333332 233544322222 46899999999854321 11
Q ss_pred HHhhc-cccCCCCEEEEecC-CCcHHHHHhhCCCCCceEEEecCcHHhhhCC
Q psy6714 193 LNDIK-PVFNESNLLISVAG-GVPIKNMEQALPKNSRIIRAMPNTPALVRQG 242 (303)
Q Consensus 193 L~eI~-~~L~~g~IVVSiaa-GV~ie~L~~~l~~~~~VVr~mPn~p~~v~~G 242 (303)
+ .+. ..+.++.+|+.++- +....-++..-..+ .+++....+.+.|+
T Consensus 196 ~-~~~~~~l~~~~~v~DlvY~P~~T~ll~~A~~~G---~~~i~Gl~MLv~Qa 243 (271)
T 1npy_A 196 L-AFPKAFIDNASVAFDVVAMPVETPFIRYAQARG---KQTISGAAVIVLQA 243 (271)
T ss_dssp C-SSCHHHHHHCSEEEECCCSSSSCHHHHHHHHTT---CEEECHHHHHHHHH
T ss_pred C-CCCHHHcCCCCEEEEeecCCCCCHHHHHHHHCC---CEEECCHHHHHHHH
Confidence 0 010 12334667776653 32232222221112 33455556666554
No 360
>3pwz_A Shikimate dehydrogenase 3; alpha-beta, oxidoreductase; 1.71A {Pseudomonas putida}
Probab=73.38 E-value=4.3 Score=36.81 Aligned_cols=107 Identities=14% Similarity=0.130 Sum_probs=53.4
Q ss_pred CCCcEEEEcCChhhHHHHHHHH-----------hhcHHHHh----hCC---CeEecChHHhh-cCCCEEEEeeCCccHHH
Q psy6714 131 NRSDKQIAGTTERGPGALIASL-----------NIVSKATG----TMG---AKITFDNKEVT-LNSEVIILAVKPHIVPV 191 (303)
Q Consensus 131 ~~mkIgIIGlG~MG~~~La~al-----------~r~~e~l~----e~G---v~v~~d~~eav-~~ADIVILAVpP~~v~~ 191 (303)
..+++.|+|.|.+|.+ ++..+ +++.+++. +++ +.+ .+..++. .++|+||-|+|.....+
T Consensus 119 ~~k~~lvlGaGg~~~a-ia~~L~~~G~~~v~i~~R~~~~a~~la~~~~~~~~~~-~~~~~l~~~~~DivInaTp~gm~~~ 196 (272)
T 3pwz_A 119 RNRRVLLLGAGGAVRG-ALLPFLQAGPSELVIANRDMAKALALRNELDHSRLRI-SRYEALEGQSFDIVVNATSASLTAD 196 (272)
T ss_dssp TTSEEEEECCSHHHHH-HHHHHHHTCCSEEEEECSCHHHHHHHHHHHCCTTEEE-ECSGGGTTCCCSEEEECSSGGGGTC
T ss_pred cCCEEEEECccHHHHH-HHHHHHHcCCCEEEEEeCCHHHHHHHHHHhccCCeeE-eeHHHhcccCCCEEEECCCCCCCCC
Confidence 4578999999999984 44332 22333221 222 232 2223332 68999999997432111
Q ss_pred HHHhh-ccccCCCCEEEEec-CCCcHHHHHhhCCCCCceEEEecCcHHhhhCC
Q psy6714 192 ALNDI-KPVFNESNLLISVA-GGVPIKNMEQALPKNSRIIRAMPNTPALVRQG 242 (303)
Q Consensus 192 VL~eI-~~~L~~g~IVVSia-aGV~ie~L~~~l~~~~~VVr~mPn~p~~v~~G 242 (303)
. ..+ ...++++.+|+.++ +.....-++..-..++. .++....+.+.|+
T Consensus 197 ~-~~i~~~~l~~~~~V~DlvY~P~~T~ll~~A~~~G~~--~~~~Gl~ML~~Qa 246 (272)
T 3pwz_A 197 L-PPLPADVLGEAALAYELAYGKGLTPFLRLAREQGQA--RLADGVGMLVEQA 246 (272)
T ss_dssp C-CCCCGGGGTTCSEEEESSCSCCSCHHHHHHHHHSCC--EEECTHHHHHHHH
T ss_pred C-CCCCHHHhCcCCEEEEeecCCCCCHHHHHHHHCCCC--EEECCHHHHHHHH
Confidence 0 001 12356777777664 33333333322111222 2555666666554
No 361
>3phh_A Shikimate dehydrogenase; shikimate pathway, helicobacter PYL oxidoreductase, alpha/beta domain, rossmann fold; HET: SKM; 1.42A {Helicobacter pylori} PDB: 3phg_A* 3phi_A* 3phj_A* 4foo_A 4fpx_A 4fos_A* 4fr5_A* 4fq8_A*
Probab=73.35 E-value=3.8 Score=37.31 Aligned_cols=103 Identities=19% Similarity=0.168 Sum_probs=54.1
Q ss_pred CCcEEEEcCChhhHHHHHHHH----------hhcHH---HHhhCCCeEecChHHhhcCCCEEEEeeCCcc-----H-HHH
Q psy6714 132 RSDKQIAGTTERGPGALIASL----------NIVSK---ATGTMGAKITFDNKEVTLNSEVIILAVKPHI-----V-PVA 192 (303)
Q Consensus 132 ~mkIgIIGlG~MG~~~La~al----------~r~~e---~l~e~Gv~v~~d~~eav~~ADIVILAVpP~~-----v-~~V 192 (303)
.+++.|||+|.||.+ ++..+ +++.+ .+.++|+.+. +..+ +.++|+||-|+|... + .+.
T Consensus 118 ~k~vlvlGaGGaara-ia~~L~~~G~~v~V~nRt~~ka~~la~~~~~~~-~~~~-l~~~DiVInaTp~Gm~~~~~l~~~~ 194 (269)
T 3phh_A 118 YQNALILGAGGSAKA-LACELKKQGLQVSVLNRSSRGLDFFQRLGCDCF-MEPP-KSAFDLIINATSASLHNELPLNKEV 194 (269)
T ss_dssp CCEEEEECCSHHHHH-HHHHHHHTTCEEEEECSSCTTHHHHHHHTCEEE-SSCC-SSCCSEEEECCTTCCCCSCSSCHHH
T ss_pred CCEEEEECCCHHHHH-HHHHHHHCCCEEEEEeCCHHHHHHHHHCCCeEe-cHHH-hccCCEEEEcccCCCCCCCCCChHH
Confidence 467999999999995 44332 22222 2224565443 2233 238999999987431 1 122
Q ss_pred HHhhccccCCCCEEEEecCCCcHHHHHhhCCCCCceEEEecCcHHhhhCCc
Q psy6714 193 LNDIKPVFNESNLLISVAGGVPIKNMEQALPKNSRIIRAMPNTPALVRQGA 243 (303)
Q Consensus 193 L~eI~~~L~~g~IVVSiaaGV~ie~L~~~l~~~~~VVr~mPn~p~~v~~G~ 243 (303)
+.+ .++++.+|+.++-.-...-++..-..+ ++++....+.+.|+.
T Consensus 195 l~~---~l~~~~~v~D~vY~P~T~ll~~A~~~G---~~~~~Gl~MLv~Qa~ 239 (269)
T 3phh_A 195 LKG---YFKEGKLAYDLAYGFLTPFLSLAKELK---TPFQDGKDMLIYQAA 239 (269)
T ss_dssp HHH---HHHHCSEEEESCCSSCCHHHHHHHHTT---CCEECSHHHHHHHHH
T ss_pred HHh---hCCCCCEEEEeCCCCchHHHHHHHHCc---CEEECCHHHHHHHHH
Confidence 211 233567777655321333233322212 345666677776653
No 362
>1r0k_A 1-deoxy-D-xylulose 5-phosphate reductoisomerase; NADPH dependent, fosmidomycin, non- mevalonate pathway, oxidoreductase; 1.91A {Zymomonas mobilis} SCOP: a.69.3.1 c.2.1.3 d.81.1.3 PDB: 1r0l_A*
Probab=73.23 E-value=5.6 Score=38.24 Aligned_cols=16 Identities=13% Similarity=0.200 Sum_probs=13.8
Q ss_pred CCcEEEEcC-ChhhHHH
Q psy6714 132 RSDKQIAGT-TERGPGA 147 (303)
Q Consensus 132 ~mkIgIIGl-G~MG~~~ 147 (303)
|+||+|+|+ |.||...
T Consensus 4 m~rI~ILGsTGSIG~~~ 20 (388)
T 1r0k_A 4 PRTVTVLGATGSIGHST 20 (388)
T ss_dssp CEEEEEETTTSHHHHHH
T ss_pred ceEEEEECCCeEeHHHH
Confidence 578999998 9999953
No 363
>3qvo_A NMRA family protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; HET: MNB; 2.30A {Shigella flexneri 2A}
Probab=72.48 E-value=5.1 Score=34.23 Aligned_cols=59 Identities=10% Similarity=0.118 Sum_probs=34.5
Q ss_pred CCCcEEEEc-CChhhHHHHHHHHhhc-----------HHHHh---hCCCeEe----cC---hHHhhcCCCEEEEeeCCcc
Q psy6714 131 NRSDKQIAG-TTERGPGALIASLNIV-----------SKATG---TMGAKIT----FD---NKEVTLNSEVIILAVKPHI 188 (303)
Q Consensus 131 ~~mkIgIIG-lG~MG~~~La~al~r~-----------~e~l~---e~Gv~v~----~d---~~eav~~ADIVILAVpP~~ 188 (303)
+||+|.|.| .|.+|. .++..+-.. .+.+. ..++.+. .| ..++++.+|+||.+.....
T Consensus 22 ~mk~vlVtGatG~iG~-~l~~~L~~~G~~~V~~~~R~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~D~vv~~a~~~~ 100 (236)
T 3qvo_A 22 HMKNVLILGAGGQIAR-HVINQLADKQTIKQTLFARQPAKIHKPYPTNSQIIMGDVLNHAALKQAMQGQDIVYANLTGED 100 (236)
T ss_dssp CCEEEEEETTTSHHHH-HHHHHHTTCTTEEEEEEESSGGGSCSSCCTTEEEEECCTTCHHHHHHHHTTCSEEEEECCSTT
T ss_pred cccEEEEEeCCcHHHH-HHHHHHHhCCCceEEEEEcChhhhcccccCCcEEEEecCCCHHHHHHHhcCCCEEEEcCCCCc
Confidence 466789998 899999 466553221 11111 1133221 12 2356788999998886655
Q ss_pred HH
Q psy6714 189 VP 190 (303)
Q Consensus 189 v~ 190 (303)
+.
T Consensus 101 ~~ 102 (236)
T 3qvo_A 101 LD 102 (236)
T ss_dssp HH
T ss_pred hh
Confidence 43
No 364
>3r6d_A NAD-dependent epimerase/dehydratase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, veillo parvula; HET: MLZ; 1.25A {Veillonella parvula dsm 2008} PDB: 4hng_A 4hnh_A* 3r14_A*
Probab=72.39 E-value=6.1 Score=33.15 Aligned_cols=58 Identities=16% Similarity=0.070 Sum_probs=33.5
Q ss_pred CCCc-EEEEc-CChhhHHHHHHHHh-----------hcHH-HHh-----hCCCeEe----c---ChHHhhcCCCEEEEee
Q psy6714 131 NRSD-KQIAG-TTERGPGALIASLN-----------IVSK-ATG-----TMGAKIT----F---DNKEVTLNSEVIILAV 184 (303)
Q Consensus 131 ~~mk-IgIIG-lG~MG~~~La~al~-----------r~~e-~l~-----e~Gv~v~----~---d~~eav~~ADIVILAV 184 (303)
+||| |.|.| .|.+|.+ ++..+- +..+ ++. ..++... . +..++++.+|+||.+.
T Consensus 3 ~mmk~vlVtGasg~iG~~-~~~~l~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~vv~~a 81 (221)
T 3r6d_A 3 AMYXYITILGAAGQIAQX-LTATLLTYTDMHITLYGRQLKTRIPPEIIDHERVTVIEGSFQNPGXLEQAVTNAEVVFVGA 81 (221)
T ss_dssp CSCSEEEEESTTSHHHHH-HHHHHHHHCCCEEEEEESSHHHHSCHHHHTSTTEEEEECCTTCHHHHHHHHTTCSEEEESC
T ss_pred ceEEEEEEEeCCcHHHHH-HHHHHHhcCCceEEEEecCccccchhhccCCCceEEEECCCCCHHHHHHHHcCCCEEEEcC
Confidence 3566 99998 7999994 554422 1223 322 1233221 1 2245678899999998
Q ss_pred CCccH
Q psy6714 185 KPHIV 189 (303)
Q Consensus 185 pP~~v 189 (303)
....+
T Consensus 82 g~~n~ 86 (221)
T 3r6d_A 82 MESGS 86 (221)
T ss_dssp CCCHH
T ss_pred CCCCh
Confidence 65333
No 365
>1zud_1 Adenylyltransferase THIF; thiamin, thiazole, protein-protein complex, THIF, TRAN biosynthetic protein complex; 1.98A {Escherichia coli} PDB: 1zfn_A* 1zkm_A
Probab=72.08 E-value=4.4 Score=35.99 Aligned_cols=20 Identities=20% Similarity=0.038 Sum_probs=15.6
Q ss_pred cCCCcEEEEcCChhhHHHHHH
Q psy6714 130 WNRSDKQIAGTTERGPGALIA 150 (303)
Q Consensus 130 ~~~mkIgIIGlG~MG~~~La~ 150 (303)
+...+|.|||+|.+|.. ++.
T Consensus 26 l~~~~VlvvG~GglG~~-va~ 45 (251)
T 1zud_1 26 LLDSQVLIIGLGGLGTP-AAL 45 (251)
T ss_dssp HHTCEEEEECCSTTHHH-HHH
T ss_pred HhcCcEEEEccCHHHHH-HHH
Confidence 44678999999999994 443
No 366
>2i6u_A Otcase, ornithine carbamoyltransferase; X-RAY crystallography, ornithine carbamyoltransferase, carbamoyl phosphate, L- norvaline; 2.20A {Mycobacterium tuberculosis} PDB: 2p2g_A
Probab=72.07 E-value=6.9 Score=36.39 Aligned_cols=56 Identities=11% Similarity=0.119 Sum_probs=37.5
Q ss_pred cccCCCcEEEEcCC--hhhHHHHHHHHhhc------------------HH----HHhhCC--CeEecChHHhhcCCCEEE
Q psy6714 128 ARWNRSDKQIAGTT--ERGPGALIASLNIV------------------SK----ATGTMG--AKITFDNKEVTLNSEVII 181 (303)
Q Consensus 128 ~~~~~mkIgIIGlG--~MG~~~La~al~r~------------------~e----~l~e~G--v~v~~d~~eav~~ADIVI 181 (303)
+.+...||+|||=| +|.. +++..+.+. .+ .+++.| +.++.|+.++++++|+|.
T Consensus 144 g~l~gl~va~vGD~~~rva~-Sl~~~~~~~g~~v~~~~P~~~~~~~~~~~~~~~~a~~~G~~~~~~~d~~eav~~aDvvy 222 (307)
T 2i6u_A 144 GALRGLRLSYFGDGANNMAH-SLLLGGVTAGIHVTVAAPEGFLPDPSVRAAAERRAQDTGASVTVTADAHAAAAGADVLV 222 (307)
T ss_dssp SCCTTCEEEEESCTTSHHHH-HHHHHHHHTTCEEEEECCTTSCCCHHHHHHHHHHHHHHTCCEEEESCHHHHHTTCSEEE
T ss_pred CCcCCeEEEEECCCCcCcHH-HHHHHHHHCCCEEEEECCccccCCHHHHHHHHHHHHHcCCeEEEEECHHHHhcCCCEEE
Confidence 34567899999975 7776 565543211 01 122556 556889999999999998
Q ss_pred Eee
Q psy6714 182 LAV 184 (303)
Q Consensus 182 LAV 184 (303)
.-+
T Consensus 223 ~~~ 225 (307)
T 2i6u_A 223 TDT 225 (307)
T ss_dssp ECC
T ss_pred ecc
Confidence 854
No 367
>4hv4_A UDP-N-acetylmuramate--L-alanine ligase; MURC, yersinia pestis peptidoglycan synthesis; HET: AMP; 2.25A {Yersinia pestis} PDB: 2f00_A
Probab=71.98 E-value=6.3 Score=38.47 Aligned_cols=57 Identities=21% Similarity=0.375 Sum_probs=37.3
Q ss_pred CCcEEEEcCChhhHHHHHHHHhh--------------cHHHHhhCCCeEec-ChHHhhcCCCEEEEe--eCCcc
Q psy6714 132 RSDKQIAGTTERGPGALIASLNI--------------VSKATGTMGAKITF-DNKEVTLNSEVIILA--VKPHI 188 (303)
Q Consensus 132 ~mkIgIIGlG~MG~~~La~al~r--------------~~e~l~e~Gv~v~~-d~~eav~~ADIVILA--VpP~~ 188 (303)
+++|.|||+|..|-+.++..+.. ..+.+.+.|+.+.. ...+.+.++|+||++ +|++.
T Consensus 22 ~~~v~viGiG~sG~s~~A~~l~~~G~~V~~~D~~~~~~~~~l~~~gi~~~~g~~~~~~~~~d~vV~Spgi~~~~ 95 (494)
T 4hv4_A 22 VRHIHFVGIGGAGMGGIAEVLANEGYQISGSDLAPNSVTQHLTALGAQIYFHHRPENVLDASVVVVSTAISADN 95 (494)
T ss_dssp CCEEEEETTTSTTHHHHHHHHHHTTCEEEEECSSCCHHHHHHHHTTCEEESSCCGGGGTTCSEEEECTTSCTTC
T ss_pred CCEEEEEEEcHhhHHHHHHHHHhCCCeEEEEECCCCHHHHHHHHCCCEEECCCCHHHcCCCCEEEECCCCCCCC
Confidence 57899999999887335554321 12356678987642 233456789999997 45543
No 368
>1vlv_A Otcase, ornithine carbamoyltransferase; TM1097, structural genomics, protein structure initiative, PSI, joint center for structu genomics; 2.25A {Thermotoga maritima} SCOP: c.78.1.1 c.78.1.1
Probab=71.38 E-value=7.3 Score=36.56 Aligned_cols=55 Identities=16% Similarity=0.164 Sum_probs=36.8
Q ss_pred ccCCCcEEEEcCC--hhhHHHHHHHHhhc------------------HH----HHhhCC--CeEecChHHhhcCCCEEEE
Q psy6714 129 RWNRSDKQIAGTT--ERGPGALIASLNIV------------------SK----ATGTMG--AKITFDNKEVTLNSEVIIL 182 (303)
Q Consensus 129 ~~~~mkIgIIGlG--~MG~~~La~al~r~------------------~e----~l~e~G--v~v~~d~~eav~~ADIVIL 182 (303)
.+...||+|+|=| ++.. +++..+.+. .+ .+++.| +.++.|+.++++++|+|..
T Consensus 164 ~l~gl~va~vGD~~~rva~-Sl~~~~~~~G~~v~~~~P~~~~p~~~~~~~~~~~a~~~G~~v~~~~d~~eav~~aDvvyt 242 (325)
T 1vlv_A 164 RLKGVKVVFMGDTRNNVAT-SLMIACAKMGMNFVACGPEELKPRSDVFKRCQEIVKETDGSVSFTSNLEEALAGADVVYT 242 (325)
T ss_dssp CSTTCEEEEESCTTSHHHH-HHHHHHHHTTCEEEEESCGGGCCCHHHHHHHHHHHHHHCCEEEEESCHHHHHTTCSEEEE
T ss_pred CcCCcEEEEECCCCcCcHH-HHHHHHHHCCCEEEEECCccccCCHHHHHHHHHHHHHcCCeEEEEcCHHHHHccCCEEEe
Confidence 4567899999975 6766 565543211 01 122567 4567899999999999988
Q ss_pred ee
Q psy6714 183 AV 184 (303)
Q Consensus 183 AV 184 (303)
-+
T Consensus 243 ~~ 244 (325)
T 1vlv_A 243 DV 244 (325)
T ss_dssp CC
T ss_pred cc
Confidence 54
No 369
>1duv_G Octase-1, ornithine transcarbamoylase; enzyme-inhibitor complex, transferase; HET: PSQ; 1.70A {Escherichia coli} SCOP: c.78.1.1 c.78.1.1 PDB: 1akm_A* 2otc_A*
Probab=71.09 E-value=7.3 Score=36.64 Aligned_cols=55 Identities=16% Similarity=0.222 Sum_probs=37.2
Q ss_pred ccCCCcEEEEcCC--hhhHHHHHHHHhh------------------c----HHHHhhCC--CeEecChHHhhcCCCEEEE
Q psy6714 129 RWNRSDKQIAGTT--ERGPGALIASLNI------------------V----SKATGTMG--AKITFDNKEVTLNSEVIIL 182 (303)
Q Consensus 129 ~~~~mkIgIIGlG--~MG~~~La~al~r------------------~----~e~l~e~G--v~v~~d~~eav~~ADIVIL 182 (303)
.+...||++||=| +|.. +++..+.. . .+.+++.| +.++.|+.++++++|||..
T Consensus 152 ~l~gl~ia~vGD~~~~va~-Sl~~~~~~~G~~v~~~~P~~~~p~~~~~~~~~~~a~~~G~~v~~~~d~~eav~~aDvvyt 230 (333)
T 1duv_G 152 AFNEMTLVYAGDARNNMGN-SMLEAAALTGLDLRLVAPQACWPEAALVTECRALAQQNGGNITLTEDVAKGVEGADFIYT 230 (333)
T ss_dssp CGGGCEEEEESCTTSHHHH-HHHHHHHHHCCEEEEECCGGGCCCHHHHHHHHHHHHHTTCEEEEESCHHHHHTTCSEEEE
T ss_pred CCCCcEEEEECCCccchHH-HHHHHHHHcCCEEEEECCcccCCCHHHHHHHHHHHHHcCCeEEEEECHHHHhCCCCEEEe
Confidence 4567899999975 7777 55544211 0 11123667 4567899999999999988
Q ss_pred ee
Q psy6714 183 AV 184 (303)
Q Consensus 183 AV 184 (303)
-+
T Consensus 231 d~ 232 (333)
T 1duv_G 231 DV 232 (333)
T ss_dssp CC
T ss_pred CC
Confidence 55
No 370
>3fpf_A Mtnas, putative uncharacterized protein; thermonicotianamine, nicotianamine, biosynthetic protein; HET: TNA MTA; 1.66A {Methanothermobacter thermautotrophicusorganism_taxid} PDB: 3fpe_A* 3fph_A* 3fpg_A* 3fpj_A* 3o31_A*
Probab=70.33 E-value=16 Score=33.77 Aligned_cols=76 Identities=14% Similarity=0.198 Sum_probs=44.4
Q ss_pred CCcEEEEcCChhhHHHHHHH----------------HhhcHHHHhhCCC---eE-ecChHHhh-cCCCEEEEeeCCccHH
Q psy6714 132 RSDKQIAGTTERGPGALIAS----------------LNIVSKATGTMGA---KI-TFDNKEVT-LNSEVIILAVKPHIVP 190 (303)
Q Consensus 132 ~mkIgIIGlG~MG~~~La~a----------------l~r~~e~l~e~Gv---~v-~~d~~eav-~~ADIVILAVpP~~v~ 190 (303)
.++|..||+|..|...+..+ +....+.+.+.|+ .+ ..|..+.- ...|+||++.-.....
T Consensus 123 g~rVLDIGcG~G~~ta~~lA~~~ga~V~gIDis~~~l~~Ar~~~~~~gl~~v~~v~gDa~~l~d~~FDvV~~~a~~~d~~ 202 (298)
T 3fpf_A 123 GERAVFIGGGPLPLTGILLSHVYGMRVNVVEIEPDIAELSRKVIEGLGVDGVNVITGDETVIDGLEFDVLMVAALAEPKR 202 (298)
T ss_dssp TCEEEEECCCSSCHHHHHHHHTTCCEEEEEESSHHHHHHHHHHHHHHTCCSEEEEESCGGGGGGCCCSEEEECTTCSCHH
T ss_pred cCEEEEECCCccHHHHHHHHHccCCEEEEEECCHHHHHHHHHHHHhcCCCCeEEEECchhhCCCCCcCEEEECCCccCHH
Confidence 56899999998764223222 0111222333443 22 23333322 4689999877656667
Q ss_pred HHHHhhccccCCCCEEE
Q psy6714 191 VALNDIKPVFNESNLLI 207 (303)
Q Consensus 191 ~VL~eI~~~L~~g~IVV 207 (303)
.+++++...+++|-.+|
T Consensus 203 ~~l~el~r~LkPGG~Lv 219 (298)
T 3fpf_A 203 RVFRNIHRYVDTETRII 219 (298)
T ss_dssp HHHHHHHHHCCTTCEEE
T ss_pred HHHHHHHHHcCCCcEEE
Confidence 88888888887765444
No 371
>3rui_A Ubiquitin-like modifier-activating enzyme ATG7; autophagosome formation, non-canonical E1, ATP BI UBL, ATG8, ATG12, ATG10, ATG3, UBL activation, thiolation; 1.91A {Saccharomyces cerevisiae} PDB: 3t7e_A 3vh3_A 3vh4_A*
Probab=70.15 E-value=5.6 Score=37.56 Aligned_cols=37 Identities=14% Similarity=0.210 Sum_probs=23.3
Q ss_pred HHhhcCCCEEEEeeCCccHHHHHHhhccccCCCCEEEEe
Q psy6714 171 KEVTLNSEVIILAVKPHIVPVALNDIKPVFNESNLLISV 209 (303)
Q Consensus 171 ~eav~~ADIVILAVpP~~v~~VL~eI~~~L~~g~IVVSi 209 (303)
.+.++++|+||.|+.....+-.+..+... .++.+|+.
T Consensus 134 ~~~l~~~DlVvd~tDn~~tR~lin~~c~~--~~~plI~a 170 (340)
T 3rui_A 134 RALIKEHDIIFLLVDSRESRWLPSLLSNI--ENKTVINA 170 (340)
T ss_dssp HHHHHHCSEEEECCSSTGGGHHHHHHHHH--TTCEEEEE
T ss_pred HhhhccCCEEEecCCCHHHHHHHHHHHHH--cCCcEEEe
Confidence 45678899999999765555555443321 34556653
No 372
>3d6n_B Aspartate carbamoyltransferase; reactor, chamber, pores, internal cavity, hydrolase, metal-B pyrimidine biosynthesis, hydrolase-transferase; HET: FLC; 2.30A {Aquifex aeolicus}
Probab=68.90 E-value=7 Score=36.10 Aligned_cols=57 Identities=11% Similarity=0.038 Sum_probs=40.4
Q ss_pred ccCCCcEEEEcC---ChhhHHHHHHHHhhcH-------------HHHhhCCCeEecChHHhhcCCCEEEEeeCCc
Q psy6714 129 RWNRSDKQIAGT---TERGPGALIASLNIVS-------------KATGTMGAKITFDNKEVTLNSEVIILAVKPH 187 (303)
Q Consensus 129 ~~~~mkIgIIGl---G~MG~~~La~al~r~~-------------e~l~e~Gv~v~~d~~eav~~ADIVILAVpP~ 187 (303)
++...||+|+|= +++.. +++..+.+.. ..+.+.|+.++.|+.++++++|+|.. +-.+
T Consensus 143 ~l~gl~va~vGDl~~~rva~-Sl~~~~~~~g~~v~~~~P~~~~p~~~~~~g~~~~~d~~eav~~aDvvy~-~~~q 215 (291)
T 3d6n_B 143 EVKDLRVLYVGDIKHSRVFR-SGAPLLNMFGAKIGVCGPKTLIPRDVEVFKVDVFDDVDKGIDWADVVIW-LRLQ 215 (291)
T ss_dssp CCTTCEEEEESCCTTCHHHH-HHHHHHHHTTCEEEEESCGGGSCTTGGGGCEEEESSHHHHHHHCSEEEE-CCCC
T ss_pred CcCCcEEEEECCCCCCchHH-HHHHHHHHCCCEEEEECCchhCCchHHHCCCEEEcCHHHHhCCCCEEEE-eCcc
Confidence 456789999996 67777 6665533211 11335588888999999999999998 7654
No 373
>4gsl_A Ubiquitin-like modifier-activating enzyme ATG7; ubiquitin-like protein activation enzyme, ubiquitin-like Pro transfer enzyme, protein transport; 2.70A {Saccharomyces cerevisiae} PDB: 3vh2_A 4gsk_A 3vh1_A
Probab=68.79 E-value=5.3 Score=40.71 Aligned_cols=37 Identities=14% Similarity=0.210 Sum_probs=23.4
Q ss_pred HHhhcCCCEEEEeeCCccHHHHHHhhccccCCCCEEEEe
Q psy6714 171 KEVTLNSEVIILAVKPHIVPVALNDIKPVFNESNLLISV 209 (303)
Q Consensus 171 ~eav~~ADIVILAVpP~~v~~VL~eI~~~L~~g~IVVSi 209 (303)
.+.++++|+||.|+.....+-.+..+.-. .++.+|+.
T Consensus 426 ~~ll~~~DlVvd~tDn~~tR~~ln~~c~~--~~~PlI~a 462 (615)
T 4gsl_A 426 RALIKEHDIIFLLVDSRESRWLPSLLSNI--ENKTVINA 462 (615)
T ss_dssp HHHHHHCSEEEECCSSGGGTHHHHHHHHH--TTCEEEEE
T ss_pred HHHhhcCCEEEecCCCHHHHHHHHHHHHH--cCCeEEEE
Confidence 35678899999999766655555443321 34556653
No 374
>2ef0_A Ornithine carbamoyltransferase; TTHA1199, thermus thermophil structural genomics, NPPSFA; 2.00A {Thermus thermophilus}
Probab=68.35 E-value=7.1 Score=36.20 Aligned_cols=55 Identities=16% Similarity=0.131 Sum_probs=36.9
Q ss_pred ccCCCcEEEEcC-ChhhHHHHHHHHhhc---------------HHHHhhCCCeEecChHHhhcCCCEEEEee
Q psy6714 129 RWNRSDKQIAGT-TERGPGALIASLNIV---------------SKATGTMGAKITFDNKEVTLNSEVIILAV 184 (303)
Q Consensus 129 ~~~~mkIgIIGl-G~MG~~~La~al~r~---------------~e~l~e~Gv~v~~d~~eav~~ADIVILAV 184 (303)
++...||+|+|= +++.. +++..+.+. .+.+...++.++.|+.++++++|+|..-+
T Consensus 151 ~l~gl~ia~vGD~~rva~-Sl~~~~~~~g~~v~~~~P~~~~~~~~~~~~~~~~~~~d~~eav~~aDvvy~~~ 221 (301)
T 2ef0_A 151 GLAGLEVAWVGDGNNVLN-SLLEVAPLAGLKVRVATPKGYEPDPGLLKRANAFFTHDPKEAALGAHALYTDV 221 (301)
T ss_dssp CCTTCEEEEESCCCHHHH-HHHHHHHHHTCEEEEECCTTCCCCHHHHHHHTCEEESCHHHHHTTCSEEEECC
T ss_pred CcCCcEEEEECCCchhHH-HHHHHHHHcCCEEEEECCchhcCCHHHHhhceeEEECCHHHHhcCCCEEEecC
Confidence 456789999995 66666 565543221 11122234778899999999999998854
No 375
>2w37_A Ornithine carbamoyltransferase, catabolic; transcarbamylase, metal binding-site, hexamer, cytoplasm, arginine metabolism; 2.10A {Lactobacillus hilgardii}
Probab=67.90 E-value=9.3 Score=36.39 Aligned_cols=55 Identities=20% Similarity=0.146 Sum_probs=36.9
Q ss_pred ccCCCcEEEEcCC--hhhHHHHHHHHhh------------------cHH----HHhhCC--CeEecChHHhhcCCCEEEE
Q psy6714 129 RWNRSDKQIAGTT--ERGPGALIASLNI------------------VSK----ATGTMG--AKITFDNKEVTLNSEVIIL 182 (303)
Q Consensus 129 ~~~~mkIgIIGlG--~MG~~~La~al~r------------------~~e----~l~e~G--v~v~~d~~eav~~ADIVIL 182 (303)
.+...||+|||=| +|.. +++..+.. ..+ .+++.| +.++.|+.++++++|||..
T Consensus 173 ~l~gl~va~vGD~~~rva~-Sl~~~~~~lG~~v~~~~P~~l~p~~~~~~~~~~~a~~~G~~v~~~~d~~eav~~aDvvyt 251 (359)
T 2w37_A 173 KLQGLTLTFMGDGRNNVAN-SLLVTGAILGVNIHIVAPKALFPTEETQNIAKGFAEKSGAKLVITDDLDEGLKGSNVVYT 251 (359)
T ss_dssp CCTTCEEEEESCTTSHHHH-HHHHHHHHHTCEEEEECCGGGSCCHHHHHHHHHHHHHHTCCEEEESCHHHHHTTCSEEEE
T ss_pred CcCCeEEEEECCCccchHH-HHHHHHHHcCCEEEEECCccccCCHHHHHHHHHHHHHcCCeEEEEeCHHHHhcCCCEEEE
Confidence 4567899999975 7776 55544211 001 122556 5568899999999999988
Q ss_pred ee
Q psy6714 183 AV 184 (303)
Q Consensus 183 AV 184 (303)
-+
T Consensus 252 d~ 253 (359)
T 2w37_A 252 DV 253 (359)
T ss_dssp CC
T ss_pred cc
Confidence 54
No 376
>3czc_A RMPB; alpha/beta sandwich, phosphotransferase system, transferase, transport; 2.02A {Streptococcus mutans}
Probab=67.86 E-value=23 Score=27.36 Aligned_cols=81 Identities=12% Similarity=0.115 Sum_probs=45.5
Q ss_pred CCCcEEEEcCChhhHHHHHHHHhhcHHHHhhCCCe---Ee-cCh---HHhhcCCCEEEEeeCCccHHHHHHhhccccCCC
Q psy6714 131 NRSDKQIAGTTERGPGALIASLNIVSKATGTMGAK---IT-FDN---KEVTLNSEVIILAVKPHIVPVALNDIKPVFNES 203 (303)
Q Consensus 131 ~~mkIgIIGlG~MG~~~La~al~r~~e~l~e~Gv~---v~-~d~---~eav~~ADIVILAVpP~~v~~VL~eI~~~L~~g 203 (303)
.++||.++=...||+..++.. +..+.+.+.|+. +. .+. .+...++|+||+.++-.. .+. ..+.
T Consensus 17 ~~~kIlvvC~sG~gTS~m~~~--kl~~~~~~~gi~~~~i~~~~~~~~~~~~~~~DlIi~t~~l~~------~~~--~~~~ 86 (110)
T 3czc_A 17 SMVKVLTACGNGMGSSMVIKM--KVENALRQLGVSDIESASCSVGEAKGLASNYDIVVASNHLIH------ELD--GRTN 86 (110)
T ss_dssp -CEEEEEECCCCHHHHHHHHH--HHHHHHHHTTCCCEEEEEECHHHHHHHGGGCSEEEEETTTGG------GTT--TSCS
T ss_pred CCcEEEEECCCcHHHHHHHHH--HHHHHHHHcCCCeEEEEEeeHHHHhhccCCCcEEEECCchHH------HhC--cCCC
Confidence 356898885556777434321 333455666654 22 222 233468999988875331 111 1234
Q ss_pred CEEEEecCCCcHHHHHhh
Q psy6714 204 NLLISVAGGVPIKNMEQA 221 (303)
Q Consensus 204 ~IVVSiaaGV~ie~L~~~ 221 (303)
..++.+...++.+.+++.
T Consensus 87 ~~vi~i~~~l~~~ei~~~ 104 (110)
T 3czc_A 87 GKLIGLDNLMDDNEIKTK 104 (110)
T ss_dssp SEEEEESSTTCHHHHHHH
T ss_pred ceEEEeeccCCHHHHHHH
Confidence 467778888888776654
No 377
>1dxh_A Ornithine carbamoyltransferase; transcarbamylase; 2.50A {Pseudomonas aeruginosa} SCOP: c.78.1.1 c.78.1.1 PDB: 1ort_A
Probab=67.37 E-value=8.4 Score=36.27 Aligned_cols=55 Identities=18% Similarity=0.157 Sum_probs=37.2
Q ss_pred ccCCCcEEEEcCC--hhhHHHHHHHHhhc----------------------HHHHhhCC--CeEecChHHhhcCCCEEEE
Q psy6714 129 RWNRSDKQIAGTT--ERGPGALIASLNIV----------------------SKATGTMG--AKITFDNKEVTLNSEVIIL 182 (303)
Q Consensus 129 ~~~~mkIgIIGlG--~MG~~~La~al~r~----------------------~e~l~e~G--v~v~~d~~eav~~ADIVIL 182 (303)
.+...||+++|=| +|.. +++..+... .+.+++.| +.++.|+.++++++|+|..
T Consensus 152 ~l~gl~va~vGD~~~~va~-Sl~~~~~~~G~~v~~~~P~~~~p~~~~~~~~~~~a~~~G~~v~~~~d~~eav~~aDvvyt 230 (335)
T 1dxh_A 152 PLHDISYAYLGDARNNMGN-SLLLIGAKLGMDVRIAAPKALWPHDEFVAQCKKFAEESGAKLTLTEDPKEAVKGVDFVHT 230 (335)
T ss_dssp CGGGCEEEEESCCSSHHHH-HHHHHHHHTTCEEEEECCGGGSCCHHHHHHHHHHHHHHTCEEEEESCHHHHTTTCSEEEE
T ss_pred CcCCeEEEEecCCccchHH-HHHHHHHHcCCEEEEECCcccCCCHHHHHHHHHHHHHcCCeEEEEeCHHHHhCCCCEEEe
Confidence 4567899999975 7777 565542210 01122567 4567899999999999988
Q ss_pred ee
Q psy6714 183 AV 184 (303)
Q Consensus 183 AV 184 (303)
-+
T Consensus 231 d~ 232 (335)
T 1dxh_A 231 DV 232 (335)
T ss_dssp CC
T ss_pred CC
Confidence 54
No 378
>3mwd_B ATP-citrate synthase; ATP-grAsp, phosphohistidine, organic acid, lyase, transferas; HET: CIT; 2.10A {Homo sapiens} PDB: 3mwe_B*
Probab=67.12 E-value=8.8 Score=36.06 Aligned_cols=82 Identities=11% Similarity=0.073 Sum_probs=50.9
Q ss_pred CCcEEEEc-CChhhHHHHHHHH-hhc--HH--------------HH----hhCCCeEecChHHhhc---CCCEEEEeeCC
Q psy6714 132 RSDKQIAG-TTERGPGALIASL-NIV--SK--------------AT----GTMGAKITFDNKEVTL---NSEVIILAVKP 186 (303)
Q Consensus 132 ~mkIgIIG-lG~MG~~~La~al-~r~--~e--------------~l----~e~Gv~v~~d~~eav~---~ADIVILAVpP 186 (303)
..|+-|-| .|.++..|+...+ ... .+ .+ .+.|+.+..+..++.+ ++|++|++||+
T Consensus 10 ~tkviV~G~~Gk~~~~ml~~~~~~~r~~~~vVagV~P~~~g~~~~v~~G~~~~Gvpvy~sv~ea~~~~p~~DlaVi~vp~ 89 (334)
T 3mwd_B 10 HTKAIVWGMQTRAVQGMLDFDYVCSRDEPSVAAMVYPFTGDHKQKFYWGHKEILIPVFKNMADAMRKHPEVDVLINFASL 89 (334)
T ss_dssp TCCEEEESCCHHHHHHHHHHHHHTTCSSCSEEEEECTTSCSEEEEEEETTEEEEEEEESSHHHHHHHCTTCCEEEECCCT
T ss_pred CCeEEEECCchHHHHHHHHhcccccCCCceEEEEEcCCCCCccceEeccCccCCceeeCCHHHHhhcCCCCcEEEEecCH
Confidence 57888888 5777765444321 110 00 01 1235677788888765 58999999998
Q ss_pred ccHH-HHHHhhccccCCC-CEEEEecCCCcHH
Q psy6714 187 HIVP-VALNDIKPVFNES-NLLISVAGGVPIK 216 (303)
Q Consensus 187 ~~v~-~VL~eI~~~L~~g-~IVVSiaaGV~ie 216 (303)
..+. .+++.+.. .+ +.+|-+..|++.+
T Consensus 90 ~~a~~ai~ea~~~---~Gv~~vViiT~G~~e~ 118 (334)
T 3mwd_B 90 RSAYDSTMETMNY---AQIRTIAIIAEGIPEA 118 (334)
T ss_dssp TTHHHHHHHHTTS---TTCCEEEECCSCCCHH
T ss_pred HHHHHHHHHHHHH---CCCCEEEEECCCCCHH
Confidence 8874 55566541 22 3556567899864
No 379
>3dhn_A NAD-dependent epimerase/dehydratase; reductase, PF01370, Q89Z24_bactn, NESG, BTR310, structural genomics, PSI-2; 2.00A {Bacteroides thetaiotaomicron}
Probab=65.95 E-value=3.3 Score=34.75 Aligned_cols=55 Identities=18% Similarity=0.134 Sum_probs=32.7
Q ss_pred CCcEEEEc-CChhhHHHHHHHHhh----------cHHHHhh--CCCeEe----cC---hHHhhcCCCEEEEeeCCc
Q psy6714 132 RSDKQIAG-TTERGPGALIASLNI----------VSKATGT--MGAKIT----FD---NKEVTLNSEVIILAVKPH 187 (303)
Q Consensus 132 ~mkIgIIG-lG~MG~~~La~al~r----------~~e~l~e--~Gv~v~----~d---~~eav~~ADIVILAVpP~ 187 (303)
||||.|.| .|.+|. .++..+.. ..+.+.. .++.+. .+ ..++++++|+||.+..+.
T Consensus 4 m~~ilItGatG~iG~-~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~d~vi~~a~~~ 78 (227)
T 3dhn_A 4 VKKIVLIGASGFVGS-ALLNEALNRGFEVTAVVRHPEKIKIENEHLKVKKADVSSLDEVCEVCKGADAVISAFNPG 78 (227)
T ss_dssp CCEEEEETCCHHHHH-HHHHHHHTTTCEEEEECSCGGGCCCCCTTEEEECCCTTCHHHHHHHHTTCSEEEECCCC-
T ss_pred CCEEEEEcCCchHHH-HHHHHHHHCCCEEEEEEcCcccchhccCceEEEEecCCCHHHHHHHhcCCCEEEEeCcCC
Confidence 68999998 799999 46655321 1122211 233321 12 345678899999998543
No 380
>1y8q_A Ubiquitin-like 1 activating enzyme E1A; SUMO, heterodimer, UBL, ligase; HET: ATP; 2.25A {Homo sapiens} PDB: 1y8r_A* 3kyc_A* 3kyd_A*
Probab=65.37 E-value=12 Score=34.89 Aligned_cols=26 Identities=12% Similarity=0.098 Sum_probs=18.9
Q ss_pred hHHhhcCCCEEEEeeCCccHHHHHHh
Q psy6714 170 NKEVTLNSEVIILAVKPHIVPVALND 195 (303)
Q Consensus 170 ~~eav~~ADIVILAVpP~~v~~VL~e 195 (303)
..+.++++|+||.|+........+..
T Consensus 119 ~~~~~~~~dvVv~~~d~~~~r~~ln~ 144 (346)
T 1y8q_A 119 PESFFTQFDAVCLTCCSRDVIVKVDQ 144 (346)
T ss_dssp CHHHHTTCSEEEEESCCHHHHHHHHH
T ss_pred hHHHhcCCCEEEEcCCCHHHHHHHHH
Confidence 35678899999999876655555544
No 381
>4a8t_A Putrescine carbamoyltransferase; trabnsferase PALO, delta-N-(phosphonoacetyl)-L- ornithine, agmatine deiminase route, agmatine catabolism; HET: PAO PGE; 1.59A {Enterococcus faecalis}
Probab=65.27 E-value=9.7 Score=35.92 Aligned_cols=53 Identities=11% Similarity=0.044 Sum_probs=34.0
Q ss_pred ccCCCcEEEEc-CChhhHHHHHHHHhhc------------------HH----HHhhCC--CeEecChHHhhcCCCEEEEe
Q psy6714 129 RWNRSDKQIAG-TTERGPGALIASLNIV------------------SK----ATGTMG--AKITFDNKEVTLNSEVIILA 183 (303)
Q Consensus 129 ~~~~mkIgIIG-lG~MG~~~La~al~r~------------------~e----~l~e~G--v~v~~d~~eav~~ADIVILA 183 (303)
.+...||+||| .+++.. +++..+.+. .+ .+++.| +.++.|+. +++++|+|..=
T Consensus 172 ~l~glkva~vGD~~rva~-Sl~~~~~~~G~~v~~~~P~~~~~~~~~~~~~~~~a~~~g~~v~~~~d~~-av~~aDvvytd 249 (339)
T 4a8t_A 172 KLEDCKVVFVGDATQVCF-SLGLITTKMGMNFVHFGPEGFQLNEEHQAKLAKNCEVSGGSFLVTDDAS-SVEGADFLYTD 249 (339)
T ss_dssp CGGGCEEEEESSCCHHHH-HHHHHHHHTTCEEEEECCTTSSCCHHHHHHHHHHHHHHCCEEEEECCGG-GGTTCSEEEEC
T ss_pred CCCCCEEEEECCCchhHH-HHHHHHHHcCCEEEEECCcccCCCHHHHHHHHHHHHHcCCEEEEECChh-HHcCCCEEEec
Confidence 45678999999 556665 555442211 01 123456 45678888 99999999963
No 382
>3h2z_A Mannitol-1-phosphate 5-dehydrogenase; PSI- protein structure initiative, structural genomics, midwest for structural genomics (MCSG); 1.90A {Shigella flexneri 2a str}
Probab=65.21 E-value=5 Score=38.38 Aligned_cols=43 Identities=14% Similarity=0.173 Sum_probs=28.0
Q ss_pred HhhcCCCEEEEeeCCccHHHHHHhhcccc--------CCCCEEEEecCCCc
Q psy6714 172 EVTLNSEVIILAVKPHIVPVALNDIKPVF--------NESNLLISVAGGVP 214 (303)
Q Consensus 172 eav~~ADIVILAVpP~~v~~VL~eI~~~L--------~~g~IVVSiaaGV~ 214 (303)
+++.++|+|..+|.|+.+..+...|...| .+.-.|+|+-+-..
T Consensus 75 ~~i~~adlitT~vG~~~l~~i~~~l~~~L~~R~~~~~~~pltilsCeN~~~ 125 (382)
T 3h2z_A 75 DLIAQVDLVTTAVGPVVLERIAPAIAKGLVKRKEQGNESPLNIIACENMVR 125 (382)
T ss_dssp HHHTTCSEEEECCCHHHHHHTHHHHHHHHHHHHHHTCCSCEEEEECCSSTT
T ss_pred HHHcCCCEEEECCCcccHHHHHHHHHHHHHHHHHcCCCCCcEEEECCCccc
Confidence 45679999999999888776654443222 12335778766554
No 383
>4a8p_A Putrescine carbamoyltransferase; ornithine agmatine deiminase route; HET: PAO; 2.00A {Enterococcus faecalis} PDB: 4a8h_A* 3txx_A
Probab=63.99 E-value=10 Score=35.99 Aligned_cols=52 Identities=12% Similarity=0.065 Sum_probs=33.8
Q ss_pred ccCCCcEEEEc-CChhhHHHHHHHHhhc------------------HH----HHhhCCC--eEecChHHhhcCCCEEEE
Q psy6714 129 RWNRSDKQIAG-TTERGPGALIASLNIV------------------SK----ATGTMGA--KITFDNKEVTLNSEVIIL 182 (303)
Q Consensus 129 ~~~~mkIgIIG-lG~MG~~~La~al~r~------------------~e----~l~e~Gv--~v~~d~~eav~~ADIVIL 182 (303)
++...||+||| +++|.. +++..+.+. .+ .+++.|. .++.|+. +++++|||..
T Consensus 150 ~l~glkva~vGD~~rva~-Sl~~~~~~~G~~v~~~~P~~~~p~~~~~~~~~~~a~~~G~~v~~~~d~~-av~~aDVVyt 226 (355)
T 4a8p_A 150 KLEDCKVVFVGDATQVCF-SLGLITTKMGMNFVHFGPEGFQLNEEHQAKLAKNCEVSGGSFLVTDDAS-SVEGADFLYT 226 (355)
T ss_dssp CGGGCEEEEESCCCHHHH-HHHHHHHHTTCEEEEECCTTSSCCHHHHHHHHHHHHHHSCEEEEECCGG-GGTTCSEEEE
T ss_pred CCCCCEEEEECCCchhHH-HHHHHHHHcCCEEEEECCCccCCCHHHHHHHHHHHHHcCCeEEEECCHH-HHcCCCEEEe
Confidence 45678999999 566666 555442211 01 1234564 5678888 9999999986
No 384
>1lnq_A MTHK channels, potassium channel related protein; rossman fold, helix bundle, membrane protein; 3.30A {Methanothermobacter thermautotrophicusorganism_taxid} SCOP: c.2.1.9 d.286.1.1 f.14.1.1 PDB: 3rbz_A
Probab=63.81 E-value=16 Score=33.09 Aligned_cols=76 Identities=14% Similarity=0.055 Sum_probs=42.2
Q ss_pred CcEEEEcCChhhHHHHHHHHhh---------cHHH--HhhCCCeEe-cC---h---HHh-hcCCCEEEEeeCCccHHHHH
Q psy6714 133 SDKQIAGTTERGPGALIASLNI---------VSKA--TGTMGAKIT-FD---N---KEV-TLNSEVIILAVKPHIVPVAL 193 (303)
Q Consensus 133 mkIgIIGlG~MG~~~La~al~r---------~~e~--l~e~Gv~v~-~d---~---~ea-v~~ADIVILAVpP~~v~~VL 193 (303)
++|.|+|.|.+|. .++..+.. +.++ +.+.|+.+. .| . .++ +++||.||++++.+...-.+
T Consensus 116 ~~viI~G~G~~g~-~l~~~L~~~g~v~vid~~~~~~~~~~~~~~~i~gd~~~~~~L~~a~i~~a~~vi~~~~~d~~n~~~ 194 (336)
T 1lnq_A 116 RHVVICGWSESTL-ECLRELRGSEVFVLAEDENVRKKVLRSGANFVHGDPTRVSDLEKANVRGARAVIVDLESDSETIHC 194 (336)
T ss_dssp CEEEEESCCHHHH-HHHTTGGGSCEEEEESCGGGHHHHHHTTCEEEESCTTSHHHHHHTCSTTEEEEEECCSSHHHHHHH
T ss_pred CCEEEECCcHHHH-HHHHHHHhCCcEEEEeCChhhhhHHhCCcEEEEeCCCCHHHHHhcChhhccEEEEcCCccHHHHHH
Confidence 4799999999999 56654321 1122 345566532 22 1 223 57899999999866443333
Q ss_pred HhhccccCCCCEEEEe
Q psy6714 194 NDIKPVFNESNLLISV 209 (303)
Q Consensus 194 ~eI~~~L~~g~IVVSi 209 (303)
-.....+.++.-||.-
T Consensus 195 ~~~ar~~~~~~~iiar 210 (336)
T 1lnq_A 195 ILGIRKIDESVRIIAE 210 (336)
T ss_dssp HHHHHTTCTTSEEEEE
T ss_pred HHHHHHHCCCCeEEEE
Confidence 2222234454334433
No 385
>3nkl_A UDP-D-quinovosamine 4-dehydrogenase; alpha-beta fold, structural genomics, PSI-2, protein structu initiative; HET: MSE GOL; 1.90A {Vibrio fischeri}
Probab=61.98 E-value=14 Score=28.81 Aligned_cols=21 Identities=24% Similarity=0.278 Sum_probs=16.4
Q ss_pred CCcEEEEcCChhhHHHHHHHHh
Q psy6714 132 RSDKQIAGTTERGPGALIASLN 153 (303)
Q Consensus 132 ~mkIgIIGlG~MG~~~La~al~ 153 (303)
..++.|||.|..|. .++..+.
T Consensus 4 ~~~vlIiGaG~~g~-~l~~~l~ 24 (141)
T 3nkl_A 4 KKKVLIYGAGSAGL-QLANMLR 24 (141)
T ss_dssp CEEEEEECCSHHHH-HHHHHHH
T ss_pred CCEEEEECCCHHHH-HHHHHHH
Confidence 45799999999999 5665544
No 386
>3vh1_A Ubiquitin-like modifier-activating enzyme ATG7; autophagy, zinc binding, metal binding protein; 3.00A {Saccharomyces cerevisiae} PDB: 3vh2_A
Probab=61.93 E-value=8.4 Score=39.12 Aligned_cols=26 Identities=12% Similarity=0.130 Sum_probs=18.4
Q ss_pred HHhhcCCCEEEEeeCCccHHHHHHhh
Q psy6714 171 KEVTLNSEVIILAVKPHIVPVALNDI 196 (303)
Q Consensus 171 ~eav~~ADIVILAVpP~~v~~VL~eI 196 (303)
.+.++++|+||.|+.....+-++..+
T Consensus 427 ~~li~~~DvVvdatDn~~tR~lin~~ 452 (598)
T 3vh1_A 427 RALIKEHDIIFLLVDSRESRWLPSLL 452 (598)
T ss_dssp HHHHHHCSEEEECCSBGGGTHHHHHH
T ss_pred HHHHhcCCEEEECCCCHHHHHHHHHH
Confidence 35677899999999766655555443
No 387
>2f00_A UDP-N-acetylmuramate--L-alanine ligase; amide bond ligase, ATPase, bacterial cell WALL; 2.50A {Escherichia coli}
Probab=61.49 E-value=14 Score=35.75 Aligned_cols=53 Identities=21% Similarity=0.330 Sum_probs=34.2
Q ss_pred CCcEEEEcCChhhHHHHHHHHhh--------------cHHHHhhCCCeEec-ChHHhhcCCCEEEEee
Q psy6714 132 RSDKQIAGTTERGPGALIASLNI--------------VSKATGTMGAKITF-DNKEVTLNSEVIILAV 184 (303)
Q Consensus 132 ~mkIgIIGlG~MG~~~La~al~r--------------~~e~l~e~Gv~v~~-d~~eav~~ADIVILAV 184 (303)
.++|.|||+|..|-+.++..+.. ..+.+.+.|+.+.. ...+.++.+|+||+.-
T Consensus 19 ~~~v~viGiG~sG~s~~A~~l~~~G~~V~~~D~~~~~~~~~l~~~gi~~~~g~~~~~~~~a~~vv~s~ 86 (491)
T 2f00_A 19 VRHIHFVGIGGAGMGGIAEVLANEGYQISGSDLAPNPVTQQLMNLGATIYFNHRPENVRDASVVVVSS 86 (491)
T ss_dssp CCEEEEETTTSTTHHHHHHHHHHTTCEEEEECSSCCHHHHHHHHTTCEEESSCCGGGGTTCSEEEECT
T ss_pred CCEEEEEEcCHHHHHHHHHHHHhCCCeEEEECCCCCHHHHHHHHCCCEEECCCCHHHcCCCCEEEECC
Confidence 56899999999988436654321 11345677887642 1223467899999863
No 388
>1p3d_A UDP-N-acetylmuramate--alanine ligase; alpha/beta protein; HET: UMA ANP; 1.70A {Haemophilus influenzae} SCOP: c.5.1.1 c.59.1.1 c.72.2.1 PDB: 1gqq_A* 1p31_A* 1gqy_A*
Probab=61.17 E-value=14 Score=35.60 Aligned_cols=53 Identities=19% Similarity=0.200 Sum_probs=34.0
Q ss_pred CCcEEEEcCChhhHHHHHHHHhh--------------cHHHHhhCCCeEe-cChHHhhcCCCEEEEee
Q psy6714 132 RSDKQIAGTTERGPGALIASLNI--------------VSKATGTMGAKIT-FDNKEVTLNSEVIILAV 184 (303)
Q Consensus 132 ~mkIgIIGlG~MG~~~La~al~r--------------~~e~l~e~Gv~v~-~d~~eav~~ADIVILAV 184 (303)
.++|.|||+|..|-+.++..+.. ..+.+.+.|+.+. ....+.++.+|+||+.-
T Consensus 18 ~~~i~viG~G~sG~s~~A~~l~~~G~~V~~~D~~~~~~~~~l~~~gi~~~~g~~~~~~~~a~~vv~s~ 85 (475)
T 1p3d_A 18 VQQIHFIGIGGAGMSGIAEILLNEGYQISGSDIADGVVTQRLAQAGAKIYIGHAEEHIEGASVVVVSS 85 (475)
T ss_dssp CCEEEEETTTSTTHHHHHHHHHHHTCEEEEEESCCSHHHHHHHHTTCEEEESCCGGGGTTCSEEEECT
T ss_pred CCEEEEEeecHHHHHHHHHHHHhCCCEEEEECCCCCHHHHHHHhCCCEEECCCCHHHcCCCCEEEECC
Confidence 56899999999988436554321 1134567788764 12223467899999863
No 389
>1tvm_A PTS system, galactitol-specific IIB component; phosphotransferase system (PTS), P-loop; NMR {Escherichia coli}
Probab=60.90 E-value=14 Score=28.89 Aligned_cols=55 Identities=5% Similarity=0.024 Sum_probs=31.5
Q ss_pred CCCcEEEEcCChhhHHHHHHHHhhcHHHHhhCCCeE--e-cC---hHHhhcCCCEEEEeeCCc
Q psy6714 131 NRSDKQIAGTTERGPGALIASLNIVSKATGTMGAKI--T-FD---NKEVTLNSEVIILAVKPH 187 (303)
Q Consensus 131 ~~mkIgIIGlG~MG~~~La~al~r~~e~l~e~Gv~v--~-~d---~~eav~~ADIVILAVpP~ 187 (303)
.++||.++=...||+..++. .+..+.+.+.|+.+ . .+ ..+.++++|+||+.++-.
T Consensus 20 ~~kkIlvvC~sG~gTS~ll~--~kl~~~~~~~gi~~~V~~~~~~~~~~~~~~~DlIist~~l~ 80 (113)
T 1tvm_A 20 SKRKIIVACGGAVATSTMAA--EEIKELCQSHNIPVELIQCRVNEIETYMDGVHLICTTARVD 80 (113)
T ss_dssp SSEEEEEESCSCSSHHHHHH--HHHHHHHHHTTCCEEEEEECTTTTTTSTTSCSEEEESSCCC
T ss_pred cccEEEEECCCCHHHHHHHH--HHHHHHHHHcCCeEEEEEecHHHHhhccCCCCEEEECCccc
Confidence 36789999555678743322 23334556667532 1 12 222346799999887643
No 390
>1vl6_A Malate oxidoreductase; TM0542, NAD-dependent malic enzyme, structural genomics, JCS protein structure initiative, PSI; 2.61A {Thermotoga maritima} SCOP: c.2.1.7 c.58.1.3 PDB: 2hae_A*
Probab=60.42 E-value=18 Score=34.79 Aligned_cols=79 Identities=11% Similarity=0.169 Sum_probs=49.2
Q ss_pred cCCCcEEEEcCChhhHHHHHHHH-----------hhc----H-----------HHHh-hCC-CeEecChHHhhcCCCEEE
Q psy6714 130 WNRSDKQIAGTTERGPGALIASL-----------NIV----S-----------KATG-TMG-AKITFDNKEVTLNSEVII 181 (303)
Q Consensus 130 ~~~mkIgIIGlG~MG~~~La~al-----------~r~----~-----------e~l~-e~G-v~v~~d~~eav~~ADIVI 181 (303)
+...||-|+|.|.+|.+ .++.+ ++. . +.+. +.+ .....+..++++.+|++|
T Consensus 190 l~~~kVVv~GAGaAG~~-iAkll~~~G~~~I~v~Dr~Gli~~~R~~~~L~~~k~~~A~~~~~~~~~~~L~eav~~ADVlI 268 (388)
T 1vl6_A 190 IEEVKVVVNGIGAAGYN-IVKFLLDLGVKNVVAVDRKGILNENDPETCLNEYHLEIARITNPERLSGDLETALEGADFFI 268 (388)
T ss_dssp TTTCEEEEECCSHHHHH-HHHHHHHHTCCEEEEEETTEECCTTSGGGCSSHHHHHHHHTSCTTCCCSCHHHHHTTCSEEE
T ss_pred CCCcEEEEECCCHHHHH-HHHHHHhCCCCeEEEEECCCcccCCCcccccCHHHHHHHHhhhccCchhhHHHHHccCCEEE
Confidence 44679999999999984 33221 111 0 1121 111 112356789999999988
Q ss_pred EeeCCcc-HHHHHHhhccccCCCCEEEEecCCC
Q psy6714 182 LAVKPHI-VPVALNDIKPVFNESNLLISVAGGV 213 (303)
Q Consensus 182 LAVpP~~-v~~VL~eI~~~L~~g~IVVSiaaGV 213 (303)
=+..|.. -+++++.++ ++.+|+.++++.
T Consensus 269 G~Sap~l~t~emVk~Ma----~~pIIfalSNPt 297 (388)
T 1vl6_A 269 GVSRGNILKPEWIKKMS----RKPVIFALANPV 297 (388)
T ss_dssp ECSCSSCSCHHHHTTSC----SSCEEEECCSSS
T ss_pred EeCCCCccCHHHHHhcC----CCCEEEEcCCCC
Confidence 7775443 356666654 566888888766
No 391
>2ark_A Flavodoxin; FMN, structural genomics, PSI, structure initiative, midwest center for structural genomic electron transport; 2.40A {Aquifex aeolicus} SCOP: c.23.5.8
Probab=60.04 E-value=17 Score=30.05 Aligned_cols=64 Identities=13% Similarity=0.145 Sum_probs=34.5
Q ss_pred CCcEEEE-cCChhhHHHHHHHHhhcHHHHhh-CCCeEe----cC-hHHhhcCCCEEEEeeCCc------cHHHHHHhhcc
Q psy6714 132 RSDKQIA-GTTERGPGALIASLNIVSKATGT-MGAKIT----FD-NKEVTLNSEVIILAVKPH------IVPVALNDIKP 198 (303)
Q Consensus 132 ~mkIgII-GlG~MG~~~La~al~r~~e~l~e-~Gv~v~----~d-~~eav~~ADIVILAVpP~------~v~~VL~eI~~ 198 (303)
||||.|| |. +.+. -....+...+.+.+ .|+.+. .+ ..+.+.++|.||++.|.+ .+..+++.+..
T Consensus 4 M~kiliiy~S--~~Gn-T~~~a~~i~~~l~~~~g~~v~~~~l~~~~~~~l~~aD~ii~gsP~y~g~~~~~lk~fld~~~~ 80 (188)
T 2ark_A 4 MGKVLVIYDT--RTGN-TKKMAELVAEGARSLEGTEVRLKHVDEATKEDVLWADGLAVGSPTNMGLVSWKMKRFFDDVLG 80 (188)
T ss_dssp CEEEEEEECC--SSSH-HHHHHHHHHHHHHTSTTEEEEEEETTTCCHHHHHHCSEEEEEEECBTTBCCHHHHHHHHHTGG
T ss_pred CCEEEEEEEC--CCcH-HHHHHHHHHHHHhhcCCCeEEEEEhhhCCHHHHHhCCEEEEEeCccCCcCCHHHHHHHHHHhh
Confidence 6788887 54 3321 11111223334444 565431 11 234567899999999744 36666766643
No 392
>3csu_A Protein (aspartate carbamoyltransferase); transferase (carbamoyl-P; 1.88A {Escherichia coli} SCOP: c.78.1.1 c.78.1.1 PDB: 1r0b_A* 1q95_A* 1raa_A* 1rab_A* 1rac_A* 1rad_A* 1rae_A* 1raf_A* 1rag_A* 1rah_A* 1rai_A* 1r0c_A* 1za2_A* 1za1_A* 2fzc_A* 2fzg_A* 2fzk_A* 2h3e_A* 2ipo_A* 2qg9_A ...
Probab=59.97 E-value=15 Score=34.07 Aligned_cols=55 Identities=13% Similarity=0.186 Sum_probs=37.8
Q ss_pred ccCCCcEEEEcC---ChhhHHHHHHHHhhc-H------------------HHHhhCCC--eEecChHHhhcCCCEEEEee
Q psy6714 129 RWNRSDKQIAGT---TERGPGALIASLNIV-S------------------KATGTMGA--KITFDNKEVTLNSEVIILAV 184 (303)
Q Consensus 129 ~~~~mkIgIIGl---G~MG~~~La~al~r~-~------------------e~l~e~Gv--~v~~d~~eav~~ADIVILAV 184 (303)
++...||+++|= |++.. +++..+.+. . +.+++.|. .++.|+.++++++|+|..-+
T Consensus 151 ~l~gl~va~vGD~~~~rva~-Sl~~~~~~~~g~~v~~~~P~~~~~~~~~~~~~~~~g~~~~~~~d~~eav~~aDvvyt~~ 229 (310)
T 3csu_A 151 RLDNLHVAMVGDLKYGRTVH-SLTQALAKFDGNRFYFIAPDALAMPQYILDMLDEKGIAWSLHSSIEEVMAEVDILYMTR 229 (310)
T ss_dssp CSSSCEEEEESCTTTCHHHH-HHHHHHHTSSSCEEEEECCGGGCCCHHHHHHHHHTTCCEEECSCGGGTTTTCSEEEECC
T ss_pred CcCCcEEEEECCCCCCchHH-HHHHHHHhCCCCEEEEECCcccccCHHHHHHHHHcCCeEEEEcCHHHHhcCCCEEEECC
Confidence 456789999996 47777 666654332 0 12334565 45688899999999988764
No 393
>3dqp_A Oxidoreductase YLBE; alpha-beta protein., structural genomics, PSI-2, protein structure initiative; 1.40A {Lactococcus lactis subsp}
Probab=59.66 E-value=5.5 Score=33.35 Aligned_cols=53 Identities=19% Similarity=0.084 Sum_probs=31.3
Q ss_pred CcEEEEc-CChhhHHHHHHHHhh----------cHHHHhh-CCCeEe----cC-h---HHhhcCCCEEEEeeCC
Q psy6714 133 SDKQIAG-TTERGPGALIASLNI----------VSKATGT-MGAKIT----FD-N---KEVTLNSEVIILAVKP 186 (303)
Q Consensus 133 mkIgIIG-lG~MG~~~La~al~r----------~~e~l~e-~Gv~v~----~d-~---~eav~~ADIVILAVpP 186 (303)
|||.|.| .|.+|. .++..+-. ..+.+.+ .++.+. .+ . .++++++|+||.+...
T Consensus 1 M~ilItGatG~iG~-~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~~d~vi~~ag~ 73 (219)
T 3dqp_A 1 MKIFIVGSTGRVGK-SLLKSLSTTDYQIYAGARKVEQVPQYNNVKAVHFDVDWTPEEMAKQLHGMDAIINVSGS 73 (219)
T ss_dssp CEEEEESTTSHHHH-HHHHHHTTSSCEEEEEESSGGGSCCCTTEEEEECCTTSCHHHHHTTTTTCSEEEECCCC
T ss_pred CeEEEECCCCHHHH-HHHHHHHHCCCEEEEEECCccchhhcCCceEEEecccCCHHHHHHHHcCCCEEEECCcC
Confidence 6899998 899999 46655321 1122211 233221 22 2 3456789999998853
No 394
>3b6i_A Flavoprotein WRBA; flavoproteins, NADH:quinone oxidoreductase, FMN; HET: FMN 15P; 1.66A {Escherichia coli} PDB: 2r96_A* 2r97_A 2rg1_A* 3b6j_A* 3b6k_A* 3b6m_A*
Probab=59.37 E-value=15 Score=30.24 Aligned_cols=27 Identities=11% Similarity=0.154 Sum_probs=18.6
Q ss_pred HHhhcCCCEEEEeeCCc------cHHHHHHhhc
Q psy6714 171 KEVTLNSEVIILAVKPH------IVPVALNDIK 197 (303)
Q Consensus 171 ~eav~~ADIVILAVpP~------~v~~VL~eI~ 197 (303)
.+.+.++|.|||+.|.+ .+..+++.+.
T Consensus 63 ~~~l~~aD~ii~gsP~y~~~~~~~lk~~ld~~~ 95 (198)
T 3b6i_A 63 PQELADYDAIIFGTPTRFGNMSGQMRTFLDQTG 95 (198)
T ss_dssp GGGGGGCSEEEEEEEEETTEECHHHHHHHTTCH
T ss_pred HHHHHHCCEEEEEeChhcCCchHHHHHHHHHhh
Confidence 34567899999999843 4556665553
No 395
>3two_A Mannitol dehydrogenase; cinnamyl-alcohol dehydrogenase, NADP(H) oxidoreductase; HET: NDP; 2.18A {Helicobacter pylori}
Probab=59.28 E-value=14 Score=33.58 Aligned_cols=66 Identities=18% Similarity=0.129 Sum_probs=40.6
Q ss_pred CCcEEEEcCChhhHHHHHHHHh-------------hcHHHHhhCCCeE-ecChHHhhcCCCEEEEeeCCc-cHHHHHHhh
Q psy6714 132 RSDKQIAGTTERGPGALIASLN-------------IVSKATGTMGAKI-TFDNKEVTLNSEVIILAVKPH-IVPVALNDI 196 (303)
Q Consensus 132 ~mkIgIIGlG~MG~~~La~al~-------------r~~e~l~e~Gv~v-~~d~~eav~~ADIVILAVpP~-~v~~VL~eI 196 (303)
..+|.|+|.|.+|. +++...+ ...+.++++|+.. ..+..++.+..|+||-|+... .+...++-+
T Consensus 177 g~~VlV~GaG~vG~-~a~qla~~~Ga~Vi~~~~~~~~~~~~~~lGa~~v~~~~~~~~~~~D~vid~~g~~~~~~~~~~~l 255 (348)
T 3two_A 177 GTKVGVAGFGGLGS-MAVKYAVAMGAEVSVFARNEHKKQDALSMGVKHFYTDPKQCKEELDFIISTIPTHYDLKDYLKLL 255 (348)
T ss_dssp TCEEEEESCSHHHH-HHHHHHHHTTCEEEEECSSSTTHHHHHHTTCSEEESSGGGCCSCEEEEEECCCSCCCHHHHHTTE
T ss_pred CCEEEEECCcHHHH-HHHHHHHHCCCeEEEEeCCHHHHHHHHhcCCCeecCCHHHHhcCCCEEEECCCcHHHHHHHHHHH
Confidence 45799999999998 3332211 1223456777742 233333334689999999755 777776655
Q ss_pred cc
Q psy6714 197 KP 198 (303)
Q Consensus 197 ~~ 198 (303)
++
T Consensus 256 ~~ 257 (348)
T 3two_A 256 TY 257 (348)
T ss_dssp EE
T ss_pred hc
Confidence 43
No 396
>4gx0_A TRKA domain protein; membrane protein, ION channel, ADP binding, NAD binding, MEM transport protein; HET: MAL GLC; 2.60A {Geobacter sulfurreducens} PDB: 4gx1_A* 4gx2_A* 4gx5_A 4gvl_A*
Probab=59.04 E-value=18 Score=35.42 Aligned_cols=77 Identities=14% Similarity=-0.015 Sum_probs=42.3
Q ss_pred CcEEEEcCChhhHHHHHHHHhhc----------HHHHhhCCCeEecC------hH-HhhcCCCEEEEeeCCccHHHHHHh
Q psy6714 133 SDKQIAGTTERGPGALIASLNIV----------SKATGTMGAKITFD------NK-EVTLNSEVIILAVKPHIVPVALND 195 (303)
Q Consensus 133 mkIgIIGlG~MG~~~La~al~r~----------~e~l~e~Gv~v~~d------~~-eav~~ADIVILAVpP~~v~~VL~e 195 (303)
+++.|+|+|.+|. .++..+... .++..+.+..+..| .. .-++++|.+|+++..+...-++..
T Consensus 349 ~~viIiG~G~~G~-~la~~L~~~g~~v~vid~d~~~~~~~~~~i~gD~t~~~~L~~agi~~ad~vi~~~~~d~~ni~~~~ 427 (565)
T 4gx0_A 349 ELIFIIGHGRIGC-AAAAFLDRKPVPFILIDRQESPVCNDHVVVYGDATVGQTLRQAGIDRASGIIVTTNDDSTNIFLTL 427 (565)
T ss_dssp CCEEEECCSHHHH-HHHHHHHHTTCCEEEEESSCCSSCCSSCEEESCSSSSTHHHHHTTTSCSEEEECCSCHHHHHHHHH
T ss_pred CCEEEECCCHHHH-HHHHHHHHCCCCEEEEECChHHHhhcCCEEEeCCCCHHHHHhcCccccCEEEEECCCchHHHHHHH
Confidence 7899999999999 677665332 12222222222211 11 225789999999887654433333
Q ss_pred hccccCCCCEEEEec
Q psy6714 196 IKPVFNESNLLISVA 210 (303)
Q Consensus 196 I~~~L~~g~IVVSia 210 (303)
+...+.++.-||.-+
T Consensus 428 ~ak~l~~~~~iiar~ 442 (565)
T 4gx0_A 428 ACRHLHSHIRIVARA 442 (565)
T ss_dssp HHHHHCSSSEEEEEE
T ss_pred HHHHHCCCCEEEEEE
Confidence 333344553344443
No 397
>2a5l_A Trp repressor binding protein WRBA; APC5760, PA0949, protein structure initiative, PSI, structural genomics; 1.70A {Pseudomonas aeruginosa} SCOP: c.23.5.8 PDB: 1zwk_A 1zwl_A*
Probab=58.71 E-value=25 Score=28.79 Aligned_cols=27 Identities=15% Similarity=0.032 Sum_probs=18.7
Q ss_pred HHhhcCCCEEEEeeCCc------cHHHHHHhhc
Q psy6714 171 KEVTLNSEVIILAVKPH------IVPVALNDIK 197 (303)
Q Consensus 171 ~eav~~ADIVILAVpP~------~v~~VL~eI~ 197 (303)
.+.+.++|.|||+.|.+ .+..+++.+.
T Consensus 66 ~~~l~~aD~ii~gsP~y~~~~~~~lk~~ld~~~ 98 (200)
T 2a5l_A 66 LEDLKNCAGLALGSPTRFGNMASPLKYFLDGTS 98 (200)
T ss_dssp HHHHHTCSEEEEEEECBTTBCCHHHHHHHHTCH
T ss_pred HHHHHHCCEEEEEcChhccCccHHHHHHHHHHH
Confidence 44567899999999844 3556665553
No 398
>3gpi_A NAD-dependent epimerase/dehydratase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.44A {Methylobacillus flagellatus KT}
Probab=58.61 E-value=11 Score=32.91 Aligned_cols=20 Identities=35% Similarity=0.325 Sum_probs=16.1
Q ss_pred CCcEEEEcCChhhHHHHHHHH
Q psy6714 132 RSDKQIAGTTERGPGALIASL 152 (303)
Q Consensus 132 ~mkIgIIGlG~MG~~~La~al 152 (303)
+|||.|.|+|.+|. .|+..+
T Consensus 3 ~~~ilVtGaG~iG~-~l~~~L 22 (286)
T 3gpi_A 3 LSKILIAGCGDLGL-ELARRL 22 (286)
T ss_dssp CCCEEEECCSHHHH-HHHHHH
T ss_pred CCcEEEECCCHHHH-HHHHHH
Confidence 57999999999999 466543
No 399
>3st7_A Capsular polysaccharide synthesis enzyme CAP5F; rossmann fold, cupid domain, short-chain dehydrogenase/reduc NADPH; 2.45A {Staphylococcus aureus} PDB: 2zkl_A 3vhr_A
Probab=58.49 E-value=3.1 Score=38.03 Aligned_cols=44 Identities=20% Similarity=0.197 Sum_probs=28.3
Q ss_pred CcEEEEc-CChhhHHHHHHHHhhcHHHHhhCCC-eEe-----cC---hHHhhcCCCEEEEee
Q psy6714 133 SDKQIAG-TTERGPGALIASLNIVSKATGTMGA-KIT-----FD---NKEVTLNSEVIILAV 184 (303)
Q Consensus 133 mkIgIIG-lG~MG~~~La~al~r~~e~l~e~Gv-~v~-----~d---~~eav~~ADIVILAV 184 (303)
|||.|.| +|.+|.. |+..+ .+.|. .+. .+ ..++++++|+||-+.
T Consensus 1 M~VlVtGatG~iG~~-l~~~L-------~~~g~~~v~~~d~~~d~~~l~~~~~~~d~Vih~a 54 (369)
T 3st7_A 1 MNIVITGAKGFVGKN-LKADL-------TSTTDHHIFEVHRQTKEEELESALLKADFIVHLA 54 (369)
T ss_dssp CEEEEETTTSHHHHH-HHHHH-------HHHCCCEEEECCTTCCHHHHHHHHHHCSEEEECC
T ss_pred CEEEEECCCCHHHHH-HHHHH-------HhCCCCEEEEECCCCCHHHHHHHhccCCEEEECC
Confidence 7899998 8999994 55332 22232 221 12 245677899999876
No 400
>4ekn_B Aspartate carbamoyltransferase; atcase, aspartate transcarbamoylase, pyrimidine biosynthesis thermostability, substrate channeling; 2.50A {Methanocaldococcus jannaschii} PDB: 3e2p_A 2rgw_A
Probab=58.48 E-value=16 Score=33.84 Aligned_cols=55 Identities=11% Similarity=0.125 Sum_probs=37.5
Q ss_pred ccCCCcEEEEcC---ChhhHHHHHHHHhhc-H------------------HHHhhCCCe--EecChHHhhcCCCEEEEee
Q psy6714 129 RWNRSDKQIAGT---TERGPGALIASLNIV-S------------------KATGTMGAK--ITFDNKEVTLNSEVIILAV 184 (303)
Q Consensus 129 ~~~~mkIgIIGl---G~MG~~~La~al~r~-~------------------e~l~e~Gv~--v~~d~~eav~~ADIVILAV 184 (303)
.+...||+|||= |++.. +++..+.+. . +.+++.|.. ++.|+.++++++|+|..-+
T Consensus 148 ~l~glkva~vGD~~~~rva~-Sl~~~~~~~~G~~v~~~~P~~~~~~~~~~~~~~~~g~~~~~~~d~~eav~~aDvvy~~~ 226 (306)
T 4ekn_B 148 RIDGIKIAFVGDLKYGRTVH-SLVYALSLFENVEMYFVSPKELRLPKDIIEDLKAKNIKFYEKESLDDLDDDIDVLYVTR 226 (306)
T ss_dssp CSTTCEEEEESCTTTCHHHH-HHHHHHHTSSSCEEEEECCGGGCCCHHHHHHHHHTTCCEEEESCGGGCCTTCSEEEECC
T ss_pred CcCCCEEEEEcCCCCCcHHH-HHHHHHHhcCCCEEEEECCcccccCHHHHHHHHHcCCEEEEEcCHHHHhcCCCEEEeCC
Confidence 456789999996 46777 666554332 0 123456664 4688899999999998653
No 401
>4e7p_A Response regulator; DNA binding, cytosol, transcription regulator; 1.89A {Streptococcus pneumoniae} PDB: 4e7o_A
Probab=57.71 E-value=60 Score=24.67 Aligned_cols=93 Identities=14% Similarity=0.005 Sum_probs=44.2
Q ss_pred CCCCCcccccCCCcEEEEcCChhhHHHHHHHHhhcHHHHhhCC----CeEecChHHhh-----cCCCEEEEeeC--CccH
Q psy6714 121 TTPSSREARWNRSDKQIAGTTERGPGALIASLNIVSKATGTMG----AKITFDNKEVT-----LNSEVIILAVK--PHIV 189 (303)
Q Consensus 121 ~~~~~~~~~~~~mkIgIIGlG~MG~~~La~al~r~~e~l~e~G----v~v~~d~~eav-----~~ADIVILAVp--P~~v 189 (303)
.+.........||+|.||.--..=...|. ..+...| +..+.+..+++ ...|+||+-.. ...-
T Consensus 9 ~~~~~~~~~~~m~~iLivdd~~~~~~~l~-------~~L~~~~~~~~v~~~~~~~~al~~l~~~~~dlii~D~~l~~~~g 81 (150)
T 4e7p_A 9 HHSSGLVPRGSHMKVLVAEDQSMLRDAMC-------QLLTLQPDVESVLQAKNGQEAIQLLEKESVDIAILDVEMPVKTG 81 (150)
T ss_dssp -----------CEEEEEECSCHHHHHHHH-------HHHHTSTTEEEEEEESSHHHHHHHHTTSCCSEEEECSSCSSSCH
T ss_pred ccccCCCCCCCccEEEEEcCCHHHHHHHH-------HHHHhCCCcEEEEEECCHHHHHHHhhccCCCEEEEeCCCCCCcH
Confidence 34444444456889999975433221121 2233333 22345555543 35799999874 4455
Q ss_pred HHHHHhhccccCCCCEEEEecCCCcHHHHHhh
Q psy6714 190 PVALNDIKPVFNESNLLISVAGGVPIKNMEQA 221 (303)
Q Consensus 190 ~~VL~eI~~~L~~g~IVVSiaaGV~ie~L~~~ 221 (303)
.++++.++... ++..||-+.+..+.+.....
T Consensus 82 ~~~~~~l~~~~-~~~~ii~ls~~~~~~~~~~~ 112 (150)
T 4e7p_A 82 LEVLEWIRSEK-LETKVVVVTTFKRAGYFERA 112 (150)
T ss_dssp HHHHHHHHHTT-CSCEEEEEESCCCHHHHHHH
T ss_pred HHHHHHHHHhC-CCCeEEEEeCCCCHHHHHHH
Confidence 67777776543 34444434444444444443
No 402
>1oth_A Protein (ornithine transcarbamoylase); transferase; HET: PAO; 1.85A {Homo sapiens} SCOP: c.78.1.1 c.78.1.1 PDB: 1ep9_A 1fvo_A 1c9y_A* 1fb5_A
Probab=57.47 E-value=13 Score=34.63 Aligned_cols=55 Identities=16% Similarity=0.092 Sum_probs=35.0
Q ss_pred ccCCCcEEEEcCCh-hhHHHHHHHHhhc------------------HH----HHhhCC--CeEecChHHhhcCCCEEEEe
Q psy6714 129 RWNRSDKQIAGTTE-RGPGALIASLNIV------------------SK----ATGTMG--AKITFDNKEVTLNSEVIILA 183 (303)
Q Consensus 129 ~~~~mkIgIIGlG~-MG~~~La~al~r~------------------~e----~l~e~G--v~v~~d~~eav~~ADIVILA 183 (303)
++...||+|||=|+ |.. +++..+.+. .+ .+++.| +.++.|+.++++++|+|..=
T Consensus 152 ~l~gl~va~vGD~~~va~-Sl~~~~~~~G~~v~~~~P~~~~~~~~~~~~~~~~a~~~G~~~~~~~d~~eav~~aDvvy~d 230 (321)
T 1oth_A 152 SLKGLTLSWIGDGNNILH-SIMMSAAKFGMHLQAATPKGYEPDASVTKLAEQYAKENGTKLLLTNDPLEAAHGGNVLITD 230 (321)
T ss_dssp CCTTCEEEEESCSSHHHH-HHHTTTGGGTCEEEEECCTTCCCCHHHHHHHHHHHHHHTCCEEEESCHHHHHTTCSEEEEC
T ss_pred CcCCcEEEEECCchhhHH-HHHHHHHHcCCeEEEECCccccCCHHHHHHHHHHHHHcCCeEEEEECHHHHhccCCEEEEe
Confidence 45678999999654 554 555432110 01 122345 56678999999999999884
Q ss_pred e
Q psy6714 184 V 184 (303)
Q Consensus 184 V 184 (303)
+
T Consensus 231 ~ 231 (321)
T 1oth_A 231 T 231 (321)
T ss_dssp C
T ss_pred c
Confidence 4
No 403
>1qv9_A F420-dependent methylenetetrahydromethanopterin dehydrogenase; monomer: alpha/beta domain, helix bundle, trimer of dimers, oxidoreductase; HET: MSE; 1.54A {Methanopyrus kandleri} SCOP: c.127.1.1 PDB: 1u6i_A 1u6j_A 1u6k_A* 3iqe_A* 3iqf_A* 3iqz_A*
Probab=57.22 E-value=13 Score=33.93 Aligned_cols=15 Identities=7% Similarity=0.016 Sum_probs=13.4
Q ss_pred CCcEEEEcCChhhHH
Q psy6714 132 RSDKQIAGTTERGPG 146 (303)
Q Consensus 132 ~mkIgIIGlG~MG~~ 146 (303)
+.|||||=+|++|.+
T Consensus 3 vvKiGiiKlGNigts 17 (283)
T 1qv9_A 3 VAKAIFIKCGNLGTS 17 (283)
T ss_dssp CEEEEEEECSCCHHH
T ss_pred eEEEEEEEecccchH
Confidence 469999999999994
No 404
>3tpf_A Otcase, ornithine carbamoyltransferase; structural genomics, center for structural genomics of infec diseases, csgid, rossman fold; 2.70A {Campylobacter jejuni subsp}
Probab=56.82 E-value=20 Score=33.20 Aligned_cols=56 Identities=14% Similarity=0.194 Sum_probs=35.7
Q ss_pred cccC-CCcEEEEc-CChhhHHHHHHHHhhc---------------H---HH----HhhCC--CeEecChHHhhcCCCEEE
Q psy6714 128 ARWN-RSDKQIAG-TTERGPGALIASLNIV---------------S---KA----TGTMG--AKITFDNKEVTLNSEVII 181 (303)
Q Consensus 128 ~~~~-~mkIgIIG-lG~MG~~~La~al~r~---------------~---e~----l~e~G--v~v~~d~~eav~~ADIVI 181 (303)
+++. ..||+||| .+++.. +++..+.+. . +. +++.| +.++.|+.++++++|+|.
T Consensus 141 g~l~~gl~va~vGD~~~va~-Sl~~~~~~~G~~v~~~~P~~~~~~~~~~~~~~~~a~~~g~~~~~~~d~~eav~~aDvvy 219 (307)
T 3tpf_A 141 KMQNGIAKVAFIGDSNNMCN-SWLITAAILGFEISIAMPKNYKISPEIWEFAMKQALISGAKISLGYDKFEALKDKDVVI 219 (307)
T ss_dssp CCGGGCCEEEEESCSSHHHH-HHHHHHHHHTCEEEEECCTTCCCCHHHHHHHHHHHHHHTCEEEEESCHHHHHTTCSEEE
T ss_pred CCCCCCCEEEEEcCCCccHH-HHHHHHHHcCCEEEEECCCccCCCHHHHHHHHHHHHHcCCeEEEEcCHHHHhcCCCEEE
Confidence 3456 78999999 456665 555442110 0 11 12445 456789999999999998
Q ss_pred Eee
Q psy6714 182 LAV 184 (303)
Q Consensus 182 LAV 184 (303)
.-+
T Consensus 220 t~~ 222 (307)
T 3tpf_A 220 TDT 222 (307)
T ss_dssp ECC
T ss_pred ecC
Confidence 765
No 405
>2pln_A HP1043, response regulator; signaling protein; 1.80A {Helicobacter pylori} PDB: 2hqo_A
Probab=56.79 E-value=58 Score=24.20 Aligned_cols=91 Identities=11% Similarity=0.051 Sum_probs=44.3
Q ss_pred CCCCCcccccCCCcEEEEcCChhhHHHHHHHHhhcHHHHhhCCCe--EecChHHhh-----cCCCEEEEeeCCccHHHHH
Q psy6714 121 TTPSSREARWNRSDKQIAGTTERGPGALIASLNIVSKATGTMGAK--ITFDNKEVT-----LNSEVIILAVKPHIVPVAL 193 (303)
Q Consensus 121 ~~~~~~~~~~~~mkIgIIGlG~MG~~~La~al~r~~e~l~e~Gv~--v~~d~~eav-----~~ADIVILAVpP~~v~~VL 193 (303)
.....+.+...+++|.||.--..=...| ...+...|+. .+.+..+++ ...|+|| ++...-.+++
T Consensus 7 ~~~~~~~~~~~~~~ilivdd~~~~~~~l-------~~~L~~~g~~v~~~~~~~~al~~l~~~~~dlvi--~~~~~g~~~~ 77 (137)
T 2pln_A 7 HHHHGSLVPRGSMRVLLIEKNSVLGGEI-------EKGLNVKGFMADVTESLEDGEYLMDIRNYDLVM--VSDKNALSFV 77 (137)
T ss_dssp --------CTTCSEEEEECSCHHHHHHH-------HHHHHHTTCEEEEESCHHHHHHHHHHSCCSEEE--ECSTTHHHHH
T ss_pred ccccCcccCCCCCeEEEEeCCHHHHHHH-------HHHHHHcCcEEEEeCCHHHHHHHHHcCCCCEEE--EcCccHHHHH
Confidence 3344444445678999997544332112 2223344554 344544443 2579988 7666666788
Q ss_pred HhhccccCCCCEEEEecCCCcHHHHHhh
Q psy6714 194 NDIKPVFNESNLLISVAGGVPIKNMEQA 221 (303)
Q Consensus 194 ~eI~~~L~~g~IVVSiaaGV~ie~L~~~ 221 (303)
+.+... ..+.-||-+.+..+.+.....
T Consensus 78 ~~l~~~-~~~~~ii~ls~~~~~~~~~~~ 104 (137)
T 2pln_A 78 SRIKEK-HSSIVVLVSSDNPTSEEEVHA 104 (137)
T ss_dssp HHHHHH-STTSEEEEEESSCCHHHHHHH
T ss_pred HHHHhc-CCCccEEEEeCCCCHHHHHHH
Confidence 777654 213434434444444444443
No 406
>3m2p_A UDP-N-acetylglucosamine 4-epimerase; SGXNY, 11155J, isomerase, structural genomics, PSI-2, protein structure initiative; HET: UDP; 2.95A {Bacillus cereus}
Probab=56.50 E-value=5.6 Score=35.20 Aligned_cols=54 Identities=9% Similarity=-0.008 Sum_probs=30.3
Q ss_pred CCCcEEEEc-CChhhHHHHHHHHhhcH----------HHHhhCCCeE------ecChHHhhcCCCEEEEeeC
Q psy6714 131 NRSDKQIAG-TTERGPGALIASLNIVS----------KATGTMGAKI------TFDNKEVTLNSEVIILAVK 185 (303)
Q Consensus 131 ~~mkIgIIG-lG~MG~~~La~al~r~~----------e~l~e~Gv~v------~~d~~eav~~ADIVILAVp 185 (303)
|+|+|.|.| .|.+|.. |+..+.... ....-.++.+ ..+..++++++|+||-+.-
T Consensus 1 M~~~vlVtGatG~iG~~-l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~d~Vih~a~ 71 (311)
T 3m2p_A 1 MSLKIAVTGGTGFLGQY-VVESIKNDGNTPIILTRSIGNKAINDYEYRVSDYTLEDLINQLNDVDAVVHLAA 71 (311)
T ss_dssp -CCEEEEETTTSHHHHH-HHHHHHHTTCEEEEEESCCC-----CCEEEECCCCHHHHHHHTTTCSEEEECCC
T ss_pred CCCEEEEECCCcHHHHH-HHHHHHhCCCEEEEEeCCCCcccCCceEEEEccccHHHHHHhhcCCCEEEEccc
Confidence 468899998 8999994 655432110 0000002321 1223456788999998874
No 407
>3fbt_A Chorismate mutase and shikimate 5-dehydrogenase fusion protein; structural genomics, oxidoreductase, amino-acid biosynthesis; 2.10A {Clostridium acetobutylicum}
Probab=56.17 E-value=8.4 Score=35.15 Aligned_cols=106 Identities=16% Similarity=0.080 Sum_probs=54.3
Q ss_pred CCcEEEEcCChhhHHHHHHHH-----------hhcHHHHhh--CCCe--EecChHHhhcCCCEEEEeeCCccHHHH--HH
Q psy6714 132 RSDKQIAGTTERGPGALIASL-----------NIVSKATGT--MGAK--ITFDNKEVTLNSEVIILAVKPHIVPVA--LN 194 (303)
Q Consensus 132 ~mkIgIIGlG~MG~~~La~al-----------~r~~e~l~e--~Gv~--v~~d~~eav~~ADIVILAVpP~~v~~V--L~ 194 (303)
..++.|||.|.+|.+ ++..+ +++.+++.+ ..+. ...+..+ + ++|+||-|+|.-..... +.
T Consensus 122 ~k~vlvlGaGGaara-ia~~L~~~G~~~v~v~nRt~~ka~~La~~~~~~~~~~l~~-l-~~DivInaTp~Gm~~~~~~~p 198 (282)
T 3fbt_A 122 NNICVVLGSGGAARA-VLQYLKDNFAKDIYVVTRNPEKTSEIYGEFKVISYDELSN-L-KGDVIINCTPKGMYPKEGESP 198 (282)
T ss_dssp TSEEEEECSSTTHHH-HHHHHHHTTCSEEEEEESCHHHHHHHCTTSEEEEHHHHTT-C-CCSEEEECSSTTSTTSTTCCS
T ss_pred CCEEEEECCcHHHHH-HHHHHHHcCCCEEEEEeCCHHHHHHHHHhcCcccHHHHHh-c-cCCEEEECCccCccCCCccCC
Confidence 567999999999984 44332 233333321 1221 1122223 4 79999999974221110 00
Q ss_pred hhccccCCCCEEEEec-CCCcHHHHHhhCCCCCceEEEecCcHHhhhCCc
Q psy6714 195 DIKPVFNESNLLISVA-GGVPIKNMEQALPKNSRIIRAMPNTPALVRQGA 243 (303)
Q Consensus 195 eI~~~L~~g~IVVSia-aGV~ie~L~~~l~~~~~VVr~mPn~p~~v~~G~ 243 (303)
--...++++.+|+.++ +.....-|+..-..+ .+++....+.+.|+.
T Consensus 199 i~~~~l~~~~~v~DlvY~P~~T~ll~~A~~~G---~~~~~Gl~MLv~Qa~ 245 (282)
T 3fbt_A 199 VDKEVVAKFSSAVDLIYNPVETLFLKYARESG---VKAVNGLYMLVSQAA 245 (282)
T ss_dssp SCHHHHTTCSEEEESCCSSSSCHHHHHHHHTT---CEEECSHHHHHHHHH
T ss_pred CCHHHcCCCCEEEEEeeCCCCCHHHHHHHHCc---CeEeCcHHHHHHHHH
Confidence 0011245677777665 444444343322212 346677777776653
No 408
>1y7t_A Malate dehydrogenase; NAD-dependent-MDH-NADPH complex, oxidoreductase; HET: NDP; 1.65A {Thermus thermophilus} SCOP: c.2.1.5 d.162.1.1 PDB: 1iz9_A* 2cvq_A* 1bmd_A* 1bdm_A* 1wze_A* 1wzi_A*
Probab=56.07 E-value=10 Score=34.54 Aligned_cols=19 Identities=16% Similarity=0.233 Sum_probs=14.9
Q ss_pred CCcEEEEcC-ChhhHHHHHHH
Q psy6714 132 RSDKQIAGT-TERGPGALIAS 151 (303)
Q Consensus 132 ~mkIgIIGl-G~MG~~~La~a 151 (303)
.|||.|+|. |.+|.+ |+..
T Consensus 4 ~mkVlVtGaaGfIG~~-l~~~ 23 (327)
T 1y7t_A 4 PVRVAVTGAAGQIGYS-LLFR 23 (327)
T ss_dssp CEEEEESSTTSHHHHH-HHHH
T ss_pred CCEEEEECCCCHHHHH-HHHH
Confidence 579999995 999995 5443
No 409
>3hzh_A Chemotaxis response regulator (CHEY-3); phosphatase, complex, response regulator, receiver domain, two-component signal transduction; HET: BFD; 1.96A {Borrelia burgdorferi}
Probab=55.36 E-value=69 Score=24.66 Aligned_cols=84 Identities=14% Similarity=0.107 Sum_probs=44.1
Q ss_pred CCCcEEEEcCChhhHHHHHHHHhhcHHHHhhCCCeE---ecChHHhhc-------CCCEEEEeeC--CccHHHHHHhhcc
Q psy6714 131 NRSDKQIAGTTERGPGALIASLNIVSKATGTMGAKI---TFDNKEVTL-------NSEVIILAVK--PHIVPVALNDIKP 198 (303)
Q Consensus 131 ~~mkIgIIGlG~MG~~~La~al~r~~e~l~e~Gv~v---~~d~~eav~-------~ADIVILAVp--P~~v~~VL~eI~~ 198 (303)
++++|.||.-=..-...| ...+.+.|+.+ +.+..++++ ..|+||+-+. ...-.++++.|+.
T Consensus 35 ~~~~Ilivdd~~~~~~~l-------~~~L~~~g~~v~~~~~~~~~al~~l~~~~~~~dliilD~~l~~~~g~~~~~~lr~ 107 (157)
T 3hzh_A 35 IPFNVLIVDDSVFTVKQL-------TQIFTSEGFNIIDTAADGEEAVIKYKNHYPNIDIVTLXITMPKMDGITCLSNIME 107 (157)
T ss_dssp EECEEEEECSCHHHHHHH-------HHHHHHTTCEEEEEESSHHHHHHHHHHHGGGCCEEEECSSCSSSCHHHHHHHHHH
T ss_pred CceEEEEEeCCHHHHHHH-------HHHHHhCCCeEEEEECCHHHHHHHHHhcCCCCCEEEEeccCCCccHHHHHHHHHh
Confidence 457899997543322112 22334556643 345544432 5799999874 4455677777765
Q ss_pred ccCCCCEEEEecCCCcHHHHHhhC
Q psy6714 199 VFNESNLLISVAGGVPIKNMEQAL 222 (303)
Q Consensus 199 ~L~~g~IVVSiaaGV~ie~L~~~l 222 (303)
.. ++.-||-+.+..+.+.+...+
T Consensus 108 ~~-~~~~ii~ls~~~~~~~~~~~~ 130 (157)
T 3hzh_A 108 FD-KNARVIMISALGKEQLVKDCL 130 (157)
T ss_dssp HC-TTCCEEEEESCCCHHHHHHHH
T ss_pred hC-CCCcEEEEeccCcHHHHHHHH
Confidence 43 333233244444444444433
No 410
>4gud_A Imidazole glycerol phosphate synthase subunit His; structural genomics, niaid, national institute of allergy AN infectious diseases; HET: MSE 1PE; 1.91A {Vibrio cholerae}
Probab=54.77 E-value=13 Score=31.32 Aligned_cols=42 Identities=21% Similarity=0.281 Sum_probs=26.9
Q ss_pred CcEEEE--cCChhhHHHHHHHHhhcHHHHhhCCCe--EecChHHhhcCCCEEEEee
Q psy6714 133 SDKQIA--GTTERGPGALIASLNIVSKATGTMGAK--ITFDNKEVTLNSEVIILAV 184 (303)
Q Consensus 133 mkIgII--GlG~MG~~~La~al~r~~e~l~e~Gv~--v~~d~~eav~~ADIVILAV 184 (303)
.||+|| |.|++.. +.+ .++++|+. ++.++ +.++++|.|||+=
T Consensus 3 ~~I~iiD~g~~n~~s--i~~-------al~~~G~~~~v~~~~-~~l~~~D~lilPG 48 (211)
T 4gud_A 3 QNVVIIDTGCANISS--VKF-------AIERLGYAVTISRDP-QVVLAADKLFLPG 48 (211)
T ss_dssp CCEEEECCCCTTHHH--HHH-------HHHHTTCCEEEECCH-HHHHHCSEEEECC
T ss_pred CEEEEEECCCChHHH--HHH-------HHHHCCCEEEEECCH-HHHhCCCEEEECC
Confidence 479999 6666544 433 34566764 34444 4567899999953
No 411
>4f2g_A Otcase 1, ornithine carbamoyltransferase 1; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.10A {Burkholderia thailandensis}
Probab=54.53 E-value=16 Score=33.89 Aligned_cols=55 Identities=11% Similarity=0.073 Sum_probs=35.3
Q ss_pred ccCCCcEEEEc-CChhhHHHHHHHHhhc--------H------HHH--hhCC--CeEecChHHhhcCCCEEEEee
Q psy6714 129 RWNRSDKQIAG-TTERGPGALIASLNIV--------S------KAT--GTMG--AKITFDNKEVTLNSEVIILAV 184 (303)
Q Consensus 129 ~~~~mkIgIIG-lG~MG~~~La~al~r~--------~------e~l--~e~G--v~v~~d~~eav~~ADIVILAV 184 (303)
++...||+||| .+++.. +++..+.+. + +.+ ++.| +.++.|+.++++++|+|..-+
T Consensus 151 ~l~glkva~vGD~~~va~-Sl~~~~~~~G~~v~~~~P~~~~~~~~~~~~~~g~~v~~~~d~~eav~~aDvvyt~~ 224 (309)
T 4f2g_A 151 PIRGKTVAWVGDANNMLY-TWIQAARILDFKLQLSTPPGYALDAKLVDAESAPFYQVFDDPNEACKGADLVTTDV 224 (309)
T ss_dssp CCTTCEEEEESCCCHHHH-HHHHHHHHHTCEEEEECCGGGCCCGGGSCGGGGGGEEECSSHHHHTTTCSEEEECC
T ss_pred CCCCCEEEEECCCcchHH-HHHHHHHHcCCEEEEECCcccCCCHHHHHHHcCCeEEEEcCHHHHhcCCCEEEecc
Confidence 45678999999 556666 555443221 0 111 1233 456789999999999998743
No 412
>1ml4_A Aspartate transcarbamoylase; beta pleated sheet, protein inhibitor complex, transferase; HET: PAL; 1.80A {Pyrococcus abyssi} SCOP: c.78.1.1 c.78.1.1
Probab=54.10 E-value=20 Score=33.24 Aligned_cols=55 Identities=15% Similarity=0.103 Sum_probs=37.4
Q ss_pred ccCCCcEEEEcCC---hhhHHHHHHHHhhc------------------HHHHhhCCC--eEecChHHhhcCCCEEEEee
Q psy6714 129 RWNRSDKQIAGTT---ERGPGALIASLNIV------------------SKATGTMGA--KITFDNKEVTLNSEVIILAV 184 (303)
Q Consensus 129 ~~~~mkIgIIGlG---~MG~~~La~al~r~------------------~e~l~e~Gv--~v~~d~~eav~~ADIVILAV 184 (303)
++...||+|||=| ++.. +++..+.+. .+.+++.|. .++.|+.++++++|+|..-+
T Consensus 152 ~l~gl~va~vGD~~~~rva~-Sl~~~~~~~G~~v~~~~P~~~~~~~~~~~~~~~~g~~~~~~~d~~eav~~aDvvyt~~ 229 (308)
T 1ml4_A 152 RIDGLKIGLLGDLKYGRTVH-SLAEALTFYDVELYLISPELLRMPRHIVEELREKGMKVVETTTLEDVIGKLDVLYVTR 229 (308)
T ss_dssp CSSSEEEEEESCTTTCHHHH-HHHHHGGGSCEEEEEECCGGGCCCHHHHHHHHHTTCCEEEESCTHHHHTTCSEEEECC
T ss_pred CCCCeEEEEeCCCCcCchHH-HHHHHHHHCCCEEEEECCccccCCHHHHHHHHHcCCeEEEEcCHHHHhcCCCEEEECC
Confidence 4567899999964 6777 666653211 122334565 46688999999999998765
No 413
>1qyc_A Phenylcoumaran benzylic ether reductase PT1; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.20A {Pinus taeda} SCOP: c.2.1.2
Probab=53.59 E-value=22 Score=30.96 Aligned_cols=54 Identities=28% Similarity=0.228 Sum_probs=33.6
Q ss_pred CCcEEEEc-CChhhHHHHHHHH-h---------hc------HHH------HhhCCCeEe----cC---hHHhhcCCCEEE
Q psy6714 132 RSDKQIAG-TTERGPGALIASL-N---------IV------SKA------TGTMGAKIT----FD---NKEVTLNSEVII 181 (303)
Q Consensus 132 ~mkIgIIG-lG~MG~~~La~al-~---------r~------~e~------l~e~Gv~v~----~d---~~eav~~ADIVI 181 (303)
||+|.|+| +|.+|.+ ++..+ + +. .++ +...|+.+. .| ..++++++|+||
T Consensus 4 ~~~ilVtGatG~iG~~-l~~~L~~~g~~V~~l~R~~~~~~~~~~~~~~~~l~~~~v~~v~~D~~d~~~l~~~~~~~d~vi 82 (308)
T 1qyc_A 4 RSRILLIGATGYIGRH-VAKASLDLGHPTFLLVRESTASSNSEKAQLLESFKASGANIVHGSIDDHASLVEAVKNVDVVI 82 (308)
T ss_dssp CCCEEEESTTSTTHHH-HHHHHHHTTCCEEEECCCCCTTTTHHHHHHHHHHHTTTCEEECCCTTCHHHHHHHHHTCSEEE
T ss_pred CCEEEEEcCCcHHHHH-HHHHHHhCCCCEEEEECCcccccCHHHHHHHHHHHhCCCEEEEeccCCHHHHHHHHcCCCEEE
Confidence 67899998 6999994 55442 1 11 111 123466542 12 345678899999
Q ss_pred EeeCC
Q psy6714 182 LAVKP 186 (303)
Q Consensus 182 LAVpP 186 (303)
.+...
T Consensus 83 ~~a~~ 87 (308)
T 1qyc_A 83 STVGS 87 (308)
T ss_dssp ECCCG
T ss_pred ECCcc
Confidence 99864
No 414
>2l2q_A PTS system, cellobiose-specific IIB component (CE; cellobiose-specific phosphotransferase IIB component, struct genomics; NMR {Borrelia burgdorferi}
Probab=53.31 E-value=17 Score=28.05 Aligned_cols=56 Identities=14% Similarity=0.122 Sum_probs=32.6
Q ss_pred CCcEEEEcCChhhHHHHHHHHhhcHHHHhhCCCe--Ee----cChHHhhcCCCEEEEeeCCccHH
Q psy6714 132 RSDKQIAGTTERGPGALIASLNIVSKATGTMGAK--IT----FDNKEVTLNSEVIILAVKPHIVP 190 (303)
Q Consensus 132 ~mkIgIIGlG~MG~~~La~al~r~~e~l~e~Gv~--v~----~d~~eav~~ADIVILAVpP~~v~ 190 (303)
.|||.++=.+.||+.+++. +..+.+.+.|+. +. .+..+.+.++|+||++.+-....
T Consensus 4 ~mkIlvvC~~G~~TSll~~---kl~~~~~~~gi~~~i~~~~~~~~~~~~~~~D~Ii~t~~l~~~~ 65 (109)
T 2l2q_A 4 SMNILLVCGAGMSTSMLVQ---RIEKYAKSKNINATIEAIAETRLSEVVDRFDVVLLAPQSRFNK 65 (109)
T ss_dssp CEEEEEESSSSCSSCHHHH---HHHHHHHHHTCSEEEEEECSTTHHHHTTTCSEEEECSCCSSHH
T ss_pred ceEEEEECCChHhHHHHHH---HHHHHHHHCCCCeEEEEecHHHHHhhcCCCCEEEECCccHHHH
Confidence 4788888444567743332 334455566652 21 23344467899999988755433
No 415
>3h2s_A Putative NADH-flavin reductase; Q03B84, NESG, LCR19, structural genomics, PSI-2, protein structure initiative; HET: NDP; 1.78A {Lactobacillus casei atcc 334}
Probab=53.01 E-value=28 Score=28.71 Aligned_cols=53 Identities=11% Similarity=0.094 Sum_probs=32.4
Q ss_pred CcEEEEc-CChhhHHHHHHHHh----------hcHHHHh---hCCCeEe-cCh----HHhhcCCCEEEEeeCC
Q psy6714 133 SDKQIAG-TTERGPGALIASLN----------IVSKATG---TMGAKIT-FDN----KEVTLNSEVIILAVKP 186 (303)
Q Consensus 133 mkIgIIG-lG~MG~~~La~al~----------r~~e~l~---e~Gv~v~-~d~----~eav~~ADIVILAVpP 186 (303)
|||.|.| .|.+|. .++..+- +..+.+. ..++.+. .|. .++++++|+||-+.-.
T Consensus 1 MkilVtGatG~iG~-~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~d~vi~~ag~ 72 (224)
T 3h2s_A 1 MKIAVLGATGRAGS-AIVAEARRRGHEVLAVVRDPQKAADRLGATVATLVKEPLVLTEADLDSVDAVVDALSV 72 (224)
T ss_dssp CEEEEETTTSHHHH-HHHHHHHHTTCEEEEEESCHHHHHHHTCTTSEEEECCGGGCCHHHHTTCSEEEECCCC
T ss_pred CEEEEEcCCCHHHH-HHHHHHHHCCCEEEEEEecccccccccCCCceEEecccccccHhhcccCCEEEECCcc
Confidence 7899998 599999 4665431 2222222 2355432 222 1567899999998843
No 416
>3c1o_A Eugenol synthase; phenylpropene, PIP reductase, short-chain dehydrogenase/reductase, oxidoreductase; HET: NAP; 1.80A {Clarkia breweri}
Probab=52.90 E-value=20 Score=31.56 Aligned_cols=65 Identities=18% Similarity=0.107 Sum_probs=37.8
Q ss_pred CCCcEEEEc-CChhhHHHHHHHHh----------hcH------HH------HhhCCCeEe----cC---hHHhhcCCCEE
Q psy6714 131 NRSDKQIAG-TTERGPGALIASLN----------IVS------KA------TGTMGAKIT----FD---NKEVTLNSEVI 180 (303)
Q Consensus 131 ~~mkIgIIG-lG~MG~~~La~al~----------r~~------e~------l~e~Gv~v~----~d---~~eav~~ADIV 180 (303)
+||+|.|.| +|.+|. .++..+- +.. ++ +...|+.+. .| ..++++.+|+|
T Consensus 3 ~~~~ilVtGatG~iG~-~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~l~~~~~~~v~~v~~D~~d~~~l~~a~~~~d~v 81 (321)
T 3c1o_A 3 HMEKIIIYGGTGYIGK-FMVRASLSFSHPTFIYARPLTPDSTPSSVQLREEFRSMGVTIIEGEMEEHEKMVSVLKQVDIV 81 (321)
T ss_dssp -CCCEEEETTTSTTHH-HHHHHHHHTTCCEEEEECCCCTTCCHHHHHHHHHHHHTTCEEEECCTTCHHHHHHHHTTCSEE
T ss_pred cccEEEEEcCCchhHH-HHHHHHHhCCCcEEEEECCcccccChHHHHHHHHhhcCCcEEEEecCCCHHHHHHHHcCCCEE
Confidence 478899998 699999 4554421 111 11 123466532 12 34567889999
Q ss_pred EEeeCC---ccHHHHHHhh
Q psy6714 181 ILAVKP---HIVPVALNDI 196 (303)
Q Consensus 181 ILAVpP---~~v~~VL~eI 196 (303)
|.+... .....+++..
T Consensus 82 i~~a~~~~~~~~~~l~~aa 100 (321)
T 3c1o_A 82 ISALPFPMISSQIHIINAI 100 (321)
T ss_dssp EECCCGGGSGGGHHHHHHH
T ss_pred EECCCccchhhHHHHHHHH
Confidence 999853 2334444443
No 417
>2x5o_A UDP-N-acetylmuramoylalanine--D-glutamate ligase; ATP-binding, cell cycle, cell division, cell shape, cell WAL biogenesis/degradation; HET: KCX VSV; 1.46A {Escherichia coli} PDB: 2wjp_A* 2xpc_A* 2y1o_A* 2jff_A* 2jfh_A* 2uuo_A* 2uup_A* 2vtd_A* 2vte_A* 2jfg_A* 2y66_A* 2y67_A* 2y68_A* 4uag_A* 1e0d_A* 1uag_A* 1eeh_A* 3uag_A* 2uag_A*
Probab=52.86 E-value=13 Score=35.50 Aligned_cols=53 Identities=11% Similarity=0.062 Sum_probs=33.8
Q ss_pred cCCCcEEEEcCChhhHHHHHHHHhhc---------------HHHHhhCCCeEe--cChHHhhcCCCEEEEee
Q psy6714 130 WNRSDKQIAGTTERGPGALIASLNIV---------------SKATGTMGAKIT--FDNKEVTLNSEVIILAV 184 (303)
Q Consensus 130 ~~~mkIgIIGlG~MG~~~La~al~r~---------------~e~l~e~Gv~v~--~d~~eav~~ADIVILAV 184 (303)
+..+||.|||+|..|-+ .+..+... ...+. .|+.+. ....+.++.+|+||++.
T Consensus 3 ~~~~~v~viG~G~~G~~-~a~~l~~~G~~v~~~D~~~~~~~~~~l~-~G~~~~~g~~~~~~~~~~d~vV~s~ 72 (439)
T 2x5o_A 3 YQGKNVVIIGLGLTGLS-CVDFFLARGVTPRVMDTRMTPPGLDKLP-EAVERHTGSLNDEWLMAADLIVASP 72 (439)
T ss_dssp CTTCCEEEECCHHHHHH-HHHHHHTTTCCCEEEESSSSCTTGGGSC-TTSCEEESSCCHHHHHTCSEEEECT
T ss_pred CCCCEEEEEeecHHHHH-HHHHHHhCCCEEEEEECCCCcchhHHhh-CCCEEEECCCcHHHhccCCEEEeCC
Confidence 34678999999998873 44443210 12344 687764 22355666899999984
No 418
>2r6j_A Eugenol synthase 1; phenylpropene, PIP reductase, short-chain dehydrogenase/reductase, plant protein; HET: NDP; 1.50A {Ocimum basilicum} PDB: 2qys_A 2qx7_A* 2qzz_A* 2r2g_A* 3c3x_A* 2qw8_A*
Probab=52.75 E-value=24 Score=31.12 Aligned_cols=64 Identities=22% Similarity=0.118 Sum_probs=37.6
Q ss_pred CCcEEEEc-CChhhHHHHHHHHh----------hcH----H---HHhhCCCeEe-c---C---hHHhhcCCCEEEEeeCC
Q psy6714 132 RSDKQIAG-TTERGPGALIASLN----------IVS----K---ATGTMGAKIT-F---D---NKEVTLNSEVIILAVKP 186 (303)
Q Consensus 132 ~mkIgIIG-lG~MG~~~La~al~----------r~~----e---~l~e~Gv~v~-~---d---~~eav~~ADIVILAVpP 186 (303)
+++|.|+| +|.+|. .++..+- +.. + .+...|+.+. . | ..++++.+|+||.+...
T Consensus 11 ~~~ilVtGatG~iG~-~l~~~L~~~g~~V~~l~R~~~~~~~~~~~l~~~~v~~v~~Dl~d~~~l~~a~~~~d~vi~~a~~ 89 (318)
T 2r6j_A 11 KSKILIFGGTGYIGN-HMVKGSLKLGHPTYVFTRPNSSKTTLLDEFQSLGAIIVKGELDEHEKLVELMKKVDVVISALAF 89 (318)
T ss_dssp CCCEEEETTTSTTHH-HHHHHHHHTTCCEEEEECTTCSCHHHHHHHHHTTCEEEECCTTCHHHHHHHHTTCSEEEECCCG
T ss_pred CCeEEEECCCchHHH-HHHHHHHHCCCcEEEEECCCCchhhHHHHhhcCCCEEEEecCCCHHHHHHHHcCCCEEEECCch
Confidence 34899998 699999 4655431 111 1 1234566532 1 2 34567889999999863
Q ss_pred ---ccHHHHHHhh
Q psy6714 187 ---HIVPVALNDI 196 (303)
Q Consensus 187 ---~~v~~VL~eI 196 (303)
.....+++..
T Consensus 90 ~~~~~~~~l~~aa 102 (318)
T 2r6j_A 90 PQILDQFKILEAI 102 (318)
T ss_dssp GGSTTHHHHHHHH
T ss_pred hhhHHHHHHHHHH
Confidence 3344555443
No 419
>4amu_A Ornithine carbamoyltransferase, catabolic; ornithine transcarbamoylase, hydrolase; 2.50A {Mycoplasma penetrans} PDB: 4anf_A
Probab=52.66 E-value=25 Score=33.51 Aligned_cols=54 Identities=13% Similarity=0.109 Sum_probs=35.0
Q ss_pred cCCCcEEEEcCC--hhhHHHHHHHHh---------------h--cHH-------HHhhCC--CeEecChHHhhcCCCEEE
Q psy6714 130 WNRSDKQIAGTT--ERGPGALIASLN---------------I--VSK-------ATGTMG--AKITFDNKEVTLNSEVII 181 (303)
Q Consensus 130 ~~~mkIgIIGlG--~MG~~~La~al~---------------r--~~e-------~l~e~G--v~v~~d~~eav~~ADIVI 181 (303)
+...||+|||=| +|.. +++..+. - ..+ .+.+.| +.++.|+.++++++|||.
T Consensus 178 l~glkva~vGD~~nnva~-Sl~~~~~~lG~~v~~~~P~~~~p~~~~~~~~~~~~~~~~~g~~i~~~~d~~eav~~aDVVy 256 (365)
T 4amu_A 178 LKNKKIVFIGDYKNNVGV-STMIGAAFNGMHVVMCGPDNYKNEIDKNVLAKCIELFKRNGGSLRFSTDKILAAQDADVIY 256 (365)
T ss_dssp CTTCEEEEESSTTSHHHH-HHHHHHHHTTCEEEEESCGGGGGGSCHHHHHHHHHHHHHHSCEEEEESCHHHHTTTCSEEE
T ss_pred CCCCEEEEECCCCcchHH-HHHHHHHHcCCEEEEECCccccCCCcHHHHHHHHHHHHHcCCEEEEECCHHHHhcCCCEEE
Confidence 567899999976 5555 5554321 1 111 123446 456788999999999998
Q ss_pred Eee
Q psy6714 182 LAV 184 (303)
Q Consensus 182 LAV 184 (303)
.-+
T Consensus 257 td~ 259 (365)
T 4amu_A 257 TDV 259 (365)
T ss_dssp ECC
T ss_pred ecc
Confidence 743
No 420
>1ydg_A Trp repressor binding protein WRBA; tetramer, structural genomics, PSI, protein structure initiative; 2.00A {Deinococcus radiodurans} SCOP: c.23.5.8 PDB: 1yrh_A*
Probab=52.56 E-value=28 Score=29.06 Aligned_cols=25 Identities=8% Similarity=0.097 Sum_probs=17.9
Q ss_pred HhhcCCCEEEEeeCC------ccHHHHHHhh
Q psy6714 172 EVTLNSEVIILAVKP------HIVPVALNDI 196 (303)
Q Consensus 172 eav~~ADIVILAVpP------~~v~~VL~eI 196 (303)
+.+.++|.|||+.|. ..+..+++.+
T Consensus 74 ~~l~~aD~ii~gsP~y~~~~~~~lk~~ld~~ 104 (211)
T 1ydg_A 74 ADLEWAEAIVFSSPTRFGGATSQMRAFIDTL 104 (211)
T ss_dssp HHHHHCSEEEEEEEEETTEECHHHHHHHHTT
T ss_pred HHHHHCCEEEEEcCccccCccHHHHHHHHHh
Confidence 456789999999983 3456666655
No 421
>3nbm_A PTS system, lactose-specific IIBC components; PTS_IIB_LACTOSE, phosphoenolpyruvate:carbohydrate system, P- phosphorylation; HET: MSE; 1.30A {Streptococcus pneumoniae}
Probab=52.22 E-value=15 Score=28.67 Aligned_cols=63 Identities=10% Similarity=-0.009 Sum_probs=35.3
Q ss_pred CCCcEEEEcCChhhHHHHHHHHhhcHHHHhhCCCe--E----ecChHHhhcCCCEEEEeeCCccHHHHHHhh
Q psy6714 131 NRSDKQIAGTTERGPGALIASLNIVSKATGTMGAK--I----TFDNKEVTLNSEVIILAVKPHIVPVALNDI 196 (303)
Q Consensus 131 ~~mkIgIIGlG~MG~~~La~al~r~~e~l~e~Gv~--v----~~d~~eav~~ADIVILAVpP~~v~~VL~eI 196 (303)
..|||.++=.|.|.+.+|+...++ .+++.|+. + .....+.+++.|+|+|+-.-....+-+++.
T Consensus 5 ~~mkIlL~C~aGmSTsllv~km~~---~a~~~gi~v~i~a~~~~~~~~~~~~~DvvLLgPQV~y~~~~ik~~ 73 (108)
T 3nbm_A 5 KELKVLVLCAGSGTSAQLANAINE---GANLTEVRVIANSGAYGAHYDIMGVYDLIILAPQVRSYYREMKVD 73 (108)
T ss_dssp CCEEEEEEESSSSHHHHHHHHHHH---HHHHHTCSEEEEEEETTSCTTTGGGCSEEEECGGGGGGHHHHHHH
T ss_pred cCceEEEECCCCCCHHHHHHHHHH---HHHHCCCceEEEEcchHHHHhhccCCCEEEEChHHHHHHHHHHHH
Confidence 468888884444888555544333 34445553 2 123345677899999985433333333333
No 422
>3sds_A Ornithine carbamoyltransferase, mitochondrial; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 2.80A {Coccidioides immitis}
Probab=51.98 E-value=29 Score=32.77 Aligned_cols=54 Identities=9% Similarity=-0.016 Sum_probs=33.9
Q ss_pred cCCCcEEEEcCC-hhhHHHHHHHHhhc--------------H----HHHh------hC--CCeEecChHHhhcCCCEEEE
Q psy6714 130 WNRSDKQIAGTT-ERGPGALIASLNIV--------------S----KATG------TM--GAKITFDNKEVTLNSEVIIL 182 (303)
Q Consensus 130 ~~~mkIgIIGlG-~MG~~~La~al~r~--------------~----e~l~------e~--Gv~v~~d~~eav~~ADIVIL 182 (303)
+...||+|||=| ++.. +++..+.+. . +.++ +. ++.++.|+.++++++|||..
T Consensus 186 l~glkva~vGD~~nva~-Sl~~~l~~lG~~v~~~~P~~~~~~~~i~~~~~~~a~~~~~g~~~~~~~d~~eav~~aDVvyt 264 (353)
T 3sds_A 186 LEGLKIAWVGDANNVLF-DLAIAATKMGVNVAVATPRGYEIPSHIVELIQKAREGVQSPGNLTQTTVPEVAVKDADVIVT 264 (353)
T ss_dssp CTTCEEEEESCCCHHHH-HHHHHHHHTTCEEEEECCTTCCCCHHHHHHHHHHHTTCSSCCCEEEESCHHHHTTTCSEEEE
T ss_pred cCCCEEEEECCCchHHH-HHHHHHHHcCCEEEEECCcccCCCHHHHHHHHHhhhhccCCCeEEEECCHHHHhcCCCEEEe
Confidence 467899999954 5554 555442211 1 1111 12 45677899999999999986
Q ss_pred ee
Q psy6714 183 AV 184 (303)
Q Consensus 183 AV 184 (303)
-+
T Consensus 265 d~ 266 (353)
T 3sds_A 265 DT 266 (353)
T ss_dssp CC
T ss_pred CC
Confidence 43
No 423
>4id9_A Short-chain dehydrogenase/reductase; putative dehydrogenase, enzyme function initiative, EFI, STR genomics, oxidoreductase; HET: NAD; 1.60A {Agrobacterium fabrum} PDB: 4idg_A*
Probab=51.82 E-value=14 Score=33.04 Aligned_cols=56 Identities=11% Similarity=0.146 Sum_probs=28.5
Q ss_pred ccCCCcEEEEc-CChhhHHHHHHHHhhcHHHH-------hhCCCeE-ec---C---hHHhhcCCCEEEEeeC
Q psy6714 129 RWNRSDKQIAG-TTERGPGALIASLNIVSKAT-------GTMGAKI-TF---D---NKEVTLNSEVIILAVK 185 (303)
Q Consensus 129 ~~~~mkIgIIG-lG~MG~~~La~al~r~~e~l-------~e~Gv~v-~~---d---~~eav~~ADIVILAVp 185 (303)
.+.+|+|.|.| .|.+|.+ |+..+....... ...++.. .. + ..++++++|+||-+..
T Consensus 16 ~~~~~~vlVtGatG~iG~~-l~~~L~~~G~~V~~~~r~~~~~~~~~~~~Dl~d~~~~~~~~~~~d~vih~A~ 86 (347)
T 4id9_A 16 PRGSHMILVTGSAGRVGRA-VVAALRTQGRTVRGFDLRPSGTGGEEVVGSLEDGQALSDAIMGVSAVLHLGA 86 (347)
T ss_dssp -----CEEEETTTSHHHHH-HHHHHHHTTCCEEEEESSCCSSCCSEEESCTTCHHHHHHHHTTCSEEEECCC
T ss_pred ccCCCEEEEECCCChHHHH-HHHHHHhCCCEEEEEeCCCCCCCccEEecCcCCHHHHHHHHhCCCEEEECCc
Confidence 34678999998 5999994 655432211000 0012221 11 1 2456789999998763
No 424
>1fy2_A Aspartyl dipeptidase; serine protease, catalytic triad, strand-helix MO hydrolase; 1.20A {Salmonella typhimurium} SCOP: c.23.16.4 PDB: 1fye_A
Probab=51.76 E-value=12 Score=32.61 Aligned_cols=83 Identities=12% Similarity=0.119 Sum_probs=46.8
Q ss_pred CCcEEEEcCChhhHHHHHHHHhhcHHHHhhCCCeEe-----cChHHhhcCCCEEEEeeC-CccHHHHHHh------hccc
Q psy6714 132 RSDKQIAGTTERGPGALIASLNIVSKATGTMGAKIT-----FDNKEVTLNSEVIILAVK-PHIVPVALND------IKPV 199 (303)
Q Consensus 132 ~mkIgIIGlG~MG~~~La~al~r~~e~l~e~Gv~v~-----~d~~eav~~ADIVILAVp-P~~v~~VL~e------I~~~ 199 (303)
..||+||-+|..+.. --..+....+.++++|+.+. .+..+.+++||.|||+=- ...+...+.+ |+..
T Consensus 31 ~~~i~iI~~a~~~~~-~~~~~~~~~~al~~lG~~~~~v~~~~d~~~~l~~ad~I~lpGG~~~~~~~~l~~~gl~~~l~~~ 109 (229)
T 1fy2_A 31 RRSAVFIPFAGVTQT-WDEYTDKTAEVLAPLGVNVTGIHRVADPLAAIEKAEIIIVGGGNTFQLLKESRERGLLAPMADR 109 (229)
T ss_dssp CCEEEEECTTCCSSC-HHHHHHHHHHHHGGGTCEEEETTSSSCHHHHHHHCSEEEECCSCHHHHHHHHHHTTCHHHHHHH
T ss_pred CCeEEEEECCCCCCC-HHHHHHHHHHHHHHCCCEEEEEeccccHHHHHhcCCEEEECCCcHHHHHHHHHHCChHHHHHHH
Confidence 478999988742110 00111233445667787542 235477889999999872 2223333322 3333
Q ss_pred cCCCCEEEEecCCCcH
Q psy6714 200 FNESNLLISVAGGVPI 215 (303)
Q Consensus 200 L~~g~IVVSiaaGV~i 215 (303)
+..+..++-+++|.-+
T Consensus 110 ~~~G~p~~G~sAG~~~ 125 (229)
T 1fy2_A 110 VKRGALYIGWSAGANL 125 (229)
T ss_dssp HHTTCEEEEETHHHHH
T ss_pred HHcCCEEEEECHHHHh
Confidence 4467788877766543
No 425
>2qrj_A Saccharopine dehydrogenase, NAD+, L-lysine- forming; sulfate, rossmann fold, alpha-aminoadipate pathway, fungal lysine biosynthesis; 1.60A {Saccharomyces cerevisiae} PDB: 2qrk_A* 2qrl_A* 2q99_A 3ugk_A 3uh1_A* 3uha_A*
Probab=51.29 E-value=16 Score=35.23 Aligned_cols=67 Identities=18% Similarity=0.249 Sum_probs=39.9
Q ss_pred CCcEEEEcC-ChhhHHHHHHHHhhcHHHHhhCCC---eEe-cCh--------HHhhcCCCEEEEeeC-----CccH-HHH
Q psy6714 132 RSDKQIAGT-TERGPGALIASLNIVSKATGTMGA---KIT-FDN--------KEVTLNSEVIILAVK-----PHIV-PVA 192 (303)
Q Consensus 132 ~mkIgIIGl-G~MG~~~La~al~r~~e~l~e~Gv---~v~-~d~--------~eav~~ADIVILAVp-----P~~v-~~V 192 (303)
..|+-|||. |..|.+.+.. +..+|+ .+. .|. .+.+.++||||=|+. |.-+ ++.
T Consensus 214 ~~kV~ViG~~G~vG~~A~~~--------a~~lGa~~~~V~v~D~~~~~~g~~~~~i~~aDivIn~vlig~~aP~Lvt~e~ 285 (394)
T 2qrj_A 214 KPTVLIIGALGRCGSGAIDL--------LHKVGIPDANILKWDIKETSRGGPFDEIPQADIFINCIYLSKPIAPFTNMEK 285 (394)
T ss_dssp CCCEEEETTTSHHHHHHHHH--------HHHTTCCGGGEEEECHHHHTTCSCCTHHHHSSEEEECCCCCSSCCCSCCHHH
T ss_pred CCeEEEEcCCCHHHHHHHHH--------HHhCCCCcCceEEeeccccccCCchhhHhhCCEEEECcCcCCCCCcccCHHH
Confidence 457999998 9999853322 222332 111 010 144668999999996 3322 344
Q ss_pred HHhhcccc-CCCCEEEEec
Q psy6714 193 LNDIKPVF-NESNLLISVA 210 (303)
Q Consensus 193 L~eI~~~L-~~g~IVVSia 210 (303)
++. + +++.+||.++
T Consensus 286 v~~----m~k~gsVIVDVA 300 (394)
T 2qrj_A 286 LNN----PNRRLRTVVDVS 300 (394)
T ss_dssp HCC----TTCCCCEEEETT
T ss_pred Hhc----CcCCCeEEEEEe
Confidence 433 4 6788888765
No 426
>3h5n_A MCCB protein; ubiquitin-activating enzyme, microcin, protein structure, MCCC7, peptide antibiotics, N-P bond formation, transferase; HET: ATP; 1.90A {Escherichia coli} PDB: 3h5r_A 3h9g_A 3h9j_A* 3h9q_A 3h5a_A
Probab=50.14 E-value=30 Score=32.27 Aligned_cols=17 Identities=18% Similarity=0.153 Sum_probs=14.6
Q ss_pred cCCCcEEEEcCChhhHH
Q psy6714 130 WNRSDKQIAGTTERGPG 146 (303)
Q Consensus 130 ~~~mkIgIIGlG~MG~~ 146 (303)
+...+|.|||+|.+|..
T Consensus 116 L~~~~VlvvG~GglGs~ 132 (353)
T 3h5n_A 116 LKNAKVVILGCGGIGNH 132 (353)
T ss_dssp HHTCEEEEECCSHHHHH
T ss_pred HhCCeEEEECCCHHHHH
Confidence 45678999999999984
No 427
>3orq_A N5-carboxyaminoimidazole ribonucleotide synthetas; ATP-grAsp superfamily, ligase,biosynthetic protein; HET: MSE ADP; 2.23A {Staphylococcus aureus subsp} PDB: 3orr_A
Probab=50.03 E-value=13 Score=34.49 Aligned_cols=21 Identities=19% Similarity=0.147 Sum_probs=17.0
Q ss_pred CCCcEEEEcCChhhHHHHHHHH
Q psy6714 131 NRSDKQIAGTTERGPGALIASL 152 (303)
Q Consensus 131 ~~mkIgIIGlG~MG~~~La~al 152 (303)
.+++|+|||.|.+|. +++..+
T Consensus 11 ~~~~IlIlG~G~lg~-~la~aa 31 (377)
T 3orq_A 11 FGATIGIIGGGQLGK-MMAQSA 31 (377)
T ss_dssp TTCEEEEECCSHHHH-HHHHHH
T ss_pred CCCEEEEECCCHHHH-HHHHHH
Confidence 357899999999999 676653
No 428
>2zki_A 199AA long hypothetical Trp repressor binding protein; alpha/beta structure, transcription; 2.90A {Sulfolobus tokodaii}
Probab=49.94 E-value=38 Score=27.80 Aligned_cols=26 Identities=4% Similarity=-0.069 Sum_probs=18.1
Q ss_pred HHhhcCCCEEEEeeCCc------cHHHHHHhh
Q psy6714 171 KEVTLNSEVIILAVKPH------IVPVALNDI 196 (303)
Q Consensus 171 ~eav~~ADIVILAVpP~------~v~~VL~eI 196 (303)
.+.+.++|.|||+.|-+ .+..+++.+
T Consensus 65 ~~~l~~aD~ii~gsP~y~~~~~~~lk~~ld~~ 96 (199)
T 2zki_A 65 LDDMRWADGFAIGSPTRYGNMAGGLKTFLDTT 96 (199)
T ss_dssp HHHHHHCSEEEEEEECBTTBCCHHHHHHHHTT
T ss_pred HHHHHhCCEEEEECCccccCccHHHHHHHHHh
Confidence 44567899999999844 355566554
No 429
>3tfw_A Putative O-methyltransferase; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium; 1.88A {Klebsiella pneumoniae subsp}
Probab=49.31 E-value=72 Score=27.34 Aligned_cols=32 Identities=16% Similarity=0.097 Sum_probs=25.8
Q ss_pred CCCEEEEeeCCccHHHHHHhhccccCCCCEEE
Q psy6714 176 NSEVIILAVKPHIVPVALNDIKPVFNESNLLI 207 (303)
Q Consensus 176 ~ADIVILAVpP~~v~~VL~eI~~~L~~g~IVV 207 (303)
..|+||+.........+++.+...+++|-+||
T Consensus 136 ~fD~V~~d~~~~~~~~~l~~~~~~LkpGG~lv 167 (248)
T 3tfw_A 136 AFDLIFIDADKPNNPHYLRWALRYSRPGTLII 167 (248)
T ss_dssp CCSEEEECSCGGGHHHHHHHHHHTCCTTCEEE
T ss_pred CeEEEEECCchHHHHHHHHHHHHhcCCCeEEE
Confidence 68999998877778888888888888776555
No 430
>3eth_A Phosphoribosylaminoimidazole carboxylase ATPase subunit; ATP-grAsp, purine biosynthesis, antimicrobial, ATP-binding, decarboxylase, lyase; HET: ATP; 1.60A {Escherichia coli} SCOP: b.84.2.1 c.30.1.1 d.142.1.2 PDB: 1b6r_A* 3etj_A* 1b6s_A*
Probab=49.15 E-value=10 Score=35.52 Aligned_cols=19 Identities=16% Similarity=0.179 Sum_probs=15.7
Q ss_pred CCcEEEEcCChhhHHHHHHH
Q psy6714 132 RSDKQIAGTTERGPGALIAS 151 (303)
Q Consensus 132 ~mkIgIIGlG~MG~~~La~a 151 (303)
|+||||||-|..|. ||+..
T Consensus 1 Mk~igilGgGqlg~-m~~~a 19 (355)
T 3eth_A 1 MKQVCVLGNGQLGR-MLRQA 19 (355)
T ss_dssp CCEEEEESCSHHHH-HHHHH
T ss_pred CCEEEEECCCHHHH-HHHHH
Confidence 34599999999999 78755
No 431
>3rih_A Short chain dehydrogenase or reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: PG5; 2.15A {Mycobacterium abscessus}
Probab=48.77 E-value=37 Score=30.28 Aligned_cols=35 Identities=20% Similarity=0.284 Sum_probs=19.3
Q ss_pred CCEEEEeeC---CccHHHHHHhhccccCCCCEEEEecC
Q psy6714 177 SEVIILAVK---PHIVPVALNDIKPVFNESNLLISVAG 211 (303)
Q Consensus 177 ADIVILAVp---P~~v~~VL~eI~~~L~~g~IVVSiaa 211 (303)
.++.++.+. +..+.++++++...+..=.+||..++
T Consensus 91 ~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~lvnnAg 128 (293)
T 3rih_A 91 GNVIGVRLDVSDPGSCADAARTVVDAFGALDVVCANAG 128 (293)
T ss_dssp SCEEEEECCTTCHHHHHHHHHHHHHHHSCCCEEEECCC
T ss_pred CcEEEEEEeCCCHHHHHHHHHHHHHHcCCCCEEEECCC
Confidence 356666664 44455666666544433346776543
No 432
>2vzf_A NADH-dependent FMN reductase; oxidoreductase; 2.50A {Edta-degrading bacterium BNC1} PDB: 2vzh_A* 2vzj_A*
Probab=48.40 E-value=25 Score=29.27 Aligned_cols=16 Identities=25% Similarity=0.287 Sum_probs=12.5
Q ss_pred HhhcCCCEEEEeeCCc
Q psy6714 172 EVTLNSEVIILAVKPH 187 (303)
Q Consensus 172 eav~~ADIVILAVpP~ 187 (303)
+.+.++|.||+++|-+
T Consensus 65 ~~i~~aD~ii~~sP~y 80 (197)
T 2vzf_A 65 DATCNADGLIVATPIY 80 (197)
T ss_dssp HHHHHCSEEEEEEECB
T ss_pred HHHHHCCEEEEEeCcc
Confidence 3467899999999844
No 433
>3rp8_A Flavoprotein monooxygenase; FAD-binding protein, oxidoreductase; HET: FAD; 1.97A {Klebsiella pneumoniae} PDB: 3rp7_A* 3rp6_A*
Probab=47.94 E-value=11 Score=34.80 Aligned_cols=20 Identities=15% Similarity=0.180 Sum_probs=16.3
Q ss_pred CCcEEEEcCChhhHHHHHHHH
Q psy6714 132 RSDKQIAGTTERGPGALIASL 152 (303)
Q Consensus 132 ~mkIgIIGlG~MG~~~La~al 152 (303)
.++|.|||.|..|. +++..+
T Consensus 23 ~~dV~IVGaG~aGl-~~A~~L 42 (407)
T 3rp8_A 23 HMKAIVIGAGIGGL-SAAVAL 42 (407)
T ss_dssp CCEEEEECCSHHHH-HHHHHH
T ss_pred CCEEEEECCCHHHH-HHHHHH
Confidence 67899999999998 566553
No 434
>1pg5_A Aspartate carbamoyltransferase; 2.60A {Sulfolobus acidocaldarius} SCOP: c.78.1.1 c.78.1.1 PDB: 2be9_A*
Probab=47.29 E-value=33 Score=31.63 Aligned_cols=55 Identities=15% Similarity=0.076 Sum_probs=38.6
Q ss_pred ccCCCcEEEEcC---ChhhHHHHHHHHhhc-H--------------H-HHhhCCC--eEecChHHhhcCCCEEEEee
Q psy6714 129 RWNRSDKQIAGT---TERGPGALIASLNIV-S--------------K-ATGTMGA--KITFDNKEVTLNSEVIILAV 184 (303)
Q Consensus 129 ~~~~mkIgIIGl---G~MG~~~La~al~r~-~--------------e-~l~e~Gv--~v~~d~~eav~~ADIVILAV 184 (303)
.+...||+|||= |++.. +++..+.+. . + .+++.|. .++.|+.++++++|+|..-+
T Consensus 146 ~l~gl~va~vGD~~~~rva~-Sl~~~~~~~~g~~v~~~~P~~~~~~~~~~~~~g~~~~~~~d~~eav~~aDvvyt~~ 221 (299)
T 1pg5_A 146 TIDGLVFALLGDLKYARTVN-SLLRILTRFRPKLVYLISPQLLRARKEILDELNYPVKEVENPFEVINEVDVLYVTR 221 (299)
T ss_dssp CSTTCEEEEEECCSSCHHHH-HHHHHGGGSCCSEEEEECCGGGCCCHHHHTTCCSCEEEESCGGGTGGGCSEEEEEC
T ss_pred CcCCcEEEEECCCCCCchHH-HHHHHHHhCCCCEEEEECCchhcCCHHHHHHcCCeEEEeCCHHHHhcCCCEEEeCC
Confidence 456789999996 57877 677664333 1 1 1345565 45688899999999998765
No 435
>3l4e_A Uncharacterized peptidase LMO0363; hypothetical protein LMO0363, csgid, similar to peptidase E, hydrolase, protease, serine protease; HET: MSE; 1.50A {Listeria monocytogenes}
Probab=47.25 E-value=9.2 Score=33.13 Aligned_cols=82 Identities=12% Similarity=0.078 Sum_probs=44.8
Q ss_pred CCcEEEEcCChhhHHHHHHHHhhcHHHHhhCCCeEe-c-----ChH---HhhcCCCEEEEeeC-CccHHHHHH------h
Q psy6714 132 RSDKQIAGTTERGPGALIASLNIVSKATGTMGAKIT-F-----DNK---EVTLNSEVIILAVK-PHIVPVALN------D 195 (303)
Q Consensus 132 ~mkIgIIGlG~MG~~~La~al~r~~e~l~e~Gv~v~-~-----d~~---eav~~ADIVILAVp-P~~v~~VL~------e 195 (303)
..+|+||.++. |...--.......+.++.+|+.+. . +.+ +.+++||.||++-- ...+-..+. .
T Consensus 27 ~~~i~~Ip~As-~~~~~~~~~~s~~~a~~~lG~~v~~~~i~~~~~~~~~~~l~~ad~I~l~GG~~~~l~~~L~~~gl~~~ 105 (206)
T 3l4e_A 27 GKTVTFIPTAS-TVEEVTFYVEAGKKALESLGLLVEELDIATESLGEITTKLRKNDFIYVTGGNTFFLLQELKRTGADKL 105 (206)
T ss_dssp TCEEEEECGGG-GGCSCCHHHHHHHHHHHHTTCEEEECCTTTSCHHHHHHHHHHSSEEEECCSCHHHHHHHHHHHTHHHH
T ss_pred CCEEEEECCCC-CCCCHHHHHHHHHHHHHHcCCeEEEEEecCCChHHHHHHHHhCCEEEECCCCHHHHHHHHHHCChHHH
Confidence 47899998763 310000011233455667787542 1 332 56789999999762 222223332 2
Q ss_pred hccccCCCCEEEEecCCCc
Q psy6714 196 IKPVFNESNLLISVAGGVP 214 (303)
Q Consensus 196 I~~~L~~g~IVVSiaaGV~ 214 (303)
|+..+..|+.++-+++|.-
T Consensus 106 l~~~~~~G~p~~G~sAGa~ 124 (206)
T 3l4e_A 106 ILEEIAAGKLYIGESAGAV 124 (206)
T ss_dssp HHHHHHTTCEEEEETHHHH
T ss_pred HHHHHHcCCeEEEECHHHH
Confidence 4444556788887776653
No 436
>3tnl_A Shikimate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD SKM; 1.45A {Listeria monocytogenes} PDB: 3toz_A*
Probab=47.25 E-value=17 Score=33.63 Aligned_cols=107 Identities=13% Similarity=0.103 Sum_probs=54.5
Q ss_pred CCCcEEEEcCChhhHHHHHHHH-----------hhc---HHHHh--------hCCCe--Ee--cC---hHHhhcCCCEEE
Q psy6714 131 NRSDKQIAGTTERGPGALIASL-----------NIV---SKATG--------TMGAK--IT--FD---NKEVTLNSEVII 181 (303)
Q Consensus 131 ~~mkIgIIGlG~MG~~~La~al-----------~r~---~e~l~--------e~Gv~--v~--~d---~~eav~~ADIVI 181 (303)
..+++.|+|.|.+|.+ ++..+ +++ .+++. ..|.. +. .+ ..+.+.++|+||
T Consensus 153 ~gk~~lVlGaGG~g~a-ia~~L~~~Ga~~V~i~nR~~~~~~~a~~la~~~~~~~~~~~~~~~~~~~~~l~~~l~~aDiII 231 (315)
T 3tnl_A 153 IGKKMTICGAGGAATA-ICIQAALDGVKEISIFNRKDDFYANAEKTVEKINSKTDCKAQLFDIEDHEQLRKEIAESVIFT 231 (315)
T ss_dssp TTSEEEEECCSHHHHH-HHHHHHHTTCSEEEEEECSSTTHHHHHHHHHHHHHHSSCEEEEEETTCHHHHHHHHHTCSEEE
T ss_pred cCCEEEEECCChHHHH-HHHHHHHCCCCEEEEEECCCchHHHHHHHHHHhhhhcCCceEEeccchHHHHHhhhcCCCEEE
Confidence 3568999999999984 44332 233 33221 12332 21 12 234567899999
Q ss_pred EeeCCccHHH----HHHhhccccCCCCEEEEec-CCCcHHHHHhhCCCCCceEEEecCcHHhhhCC
Q psy6714 182 LAVKPHIVPV----ALNDIKPVFNESNLLISVA-GGVPIKNMEQALPKNSRIIRAMPNTPALVRQG 242 (303)
Q Consensus 182 LAVpP~~v~~----VL~eI~~~L~~g~IVVSia-aGV~ie~L~~~l~~~~~VVr~mPn~p~~v~~G 242 (303)
-|+|.-.... .+. ....++++.+|+.++ ++....-|+..-..+ .+++....+.+.|+
T Consensus 232 NaTp~Gm~~~~~~~p~~-~~~~l~~~~~V~DlvY~P~~T~ll~~A~~~G---~~~~~Gl~MLv~Qa 293 (315)
T 3tnl_A 232 NATGVGMKPFEGETLLP-SADMLRPELIVSDVVYKPTKTRLLEIAEEQG---CQTLNGLGMMLWQG 293 (315)
T ss_dssp ECSSTTSTTSTTCCSCC-CGGGCCTTCEEEESCCSSSSCHHHHHHHHTT---CEEECSHHHHHHHH
T ss_pred ECccCCCCCCCCCCCCC-cHHHcCCCCEEEEeccCCCCCHHHHHHHHCC---CeEeCcHHHHHHHH
Confidence 9987432211 010 122355677766654 333333333322212 35566667766654
No 437
>3uog_A Alcohol dehydrogenase; structural genomics, protein structure initiative, PSI-biolo YORK structural genomics research consortium; 2.20A {Sinorhizobium meliloti 1021}
Probab=47.23 E-value=21 Score=32.74 Aligned_cols=14 Identities=14% Similarity=0.057 Sum_probs=12.3
Q ss_pred CCcEEEEcCChhhH
Q psy6714 132 RSDKQIAGTTERGP 145 (303)
Q Consensus 132 ~mkIgIIGlG~MG~ 145 (303)
..+|.|+|.|.+|.
T Consensus 190 g~~VlV~G~G~vG~ 203 (363)
T 3uog_A 190 GDRVVVQGTGGVAL 203 (363)
T ss_dssp TCEEEEESSBHHHH
T ss_pred CCEEEEECCCHHHH
Confidence 35899999999998
No 438
>2x4g_A Nucleoside-diphosphate-sugar epimerase; isomerase; 2.65A {Pseudomonas aeruginosa}
Probab=47.23 E-value=27 Score=30.78 Aligned_cols=54 Identities=11% Similarity=0.071 Sum_probs=30.9
Q ss_pred CCCcEEEEc-CChhhHHHHHHHHhh----------cHH---HHhhCCCeEe-c---C---hHHhhcCCCEEEEeeC
Q psy6714 131 NRSDKQIAG-TTERGPGALIASLNI----------VSK---ATGTMGAKIT-F---D---NKEVTLNSEVIILAVK 185 (303)
Q Consensus 131 ~~mkIgIIG-lG~MG~~~La~al~r----------~~e---~l~e~Gv~v~-~---d---~~eav~~ADIVILAVp 185 (303)
.+|+|.|.| .|.+|.+ |+..+.. ... .+...++... . + ..++++.+|+||-+.-
T Consensus 12 ~~M~ilVtGatG~iG~~-l~~~L~~~g~~V~~~~r~~~~~~~l~~~~~~~~~~Dl~d~~~~~~~~~~~d~vih~a~ 86 (342)
T 2x4g_A 12 AHVKYAVLGATGLLGHH-AARAIRAAGHDLVLIHRPSSQIQRLAYLEPECRVAEMLDHAGLERALRGLDGVIFSAG 86 (342)
T ss_dssp CCCEEEEESTTSHHHHH-HHHHHHHTTCEEEEEECTTSCGGGGGGGCCEEEECCTTCHHHHHHHTTTCSEEEEC--
T ss_pred cCCEEEEECCCcHHHHH-HHHHHHHCCCEEEEEecChHhhhhhccCCeEEEEecCCCHHHHHHHHcCCCEEEECCc
Confidence 468999998 7999994 6554321 111 1222244322 1 2 2356778999998864
No 439
>1gtm_A Glutamate dehydrogenase; oxidoreductase, NAD, NADP; 2.20A {Pyrococcus furiosus} SCOP: c.2.1.7 c.58.1.1 PDB: 1bvu_A 1euz_A
Probab=46.41 E-value=14 Score=35.57 Aligned_cols=19 Identities=21% Similarity=0.162 Sum_probs=15.5
Q ss_pred cCCCcEEEEcCChhhHHHHH
Q psy6714 130 WNRSDKQIAGTTERGPGALI 149 (303)
Q Consensus 130 ~~~mkIgIIGlG~MG~~~La 149 (303)
+..++++|+|+|+||. .++
T Consensus 210 l~gktvgI~G~G~VG~-~vA 228 (419)
T 1gtm_A 210 LKGKTIAIQGYGNAGY-YLA 228 (419)
T ss_dssp STTCEEEEECCSHHHH-HHH
T ss_pred cCCCEEEEEcCCHHHH-HHH
Confidence 4568899999999999 344
No 440
>4hb9_A Similarities with probable monooxygenase; flavin, structural genomics, NEW YORK structural genomics RE consortium, nysgrc, PSI; HET: MSE FAD; 1.93A {Photorhabdus luminescens}
Probab=46.04 E-value=12 Score=33.87 Aligned_cols=19 Identities=26% Similarity=0.281 Sum_probs=16.1
Q ss_pred CcEEEEcCChhhHHHHHHHH
Q psy6714 133 SDKQIAGTTERGPGALIASL 152 (303)
Q Consensus 133 mkIgIIGlG~MG~~~La~al 152 (303)
|||.|||.|.-|- +++..+
T Consensus 2 m~V~IVGaGpaGl-~~A~~L 20 (412)
T 4hb9_A 2 MHVGIIGAGIGGT-CLAHGL 20 (412)
T ss_dssp CEEEEECCSHHHH-HHHHHH
T ss_pred CEEEEECcCHHHH-HHHHHH
Confidence 8999999999998 666654
No 441
>3d7n_A Flavodoxin, WRBA-like protein; structural genomics, PSI, MCS protein structure initiative, midwest center for structural genomics; 2.30A {Agrobacterium tumefaciens}
Probab=45.81 E-value=18 Score=30.21 Aligned_cols=26 Identities=8% Similarity=0.005 Sum_probs=19.0
Q ss_pred HhhcCCCEEEEeeCC------ccHHHHHHhhc
Q psy6714 172 EVTLNSEVIILAVKP------HIVPVALNDIK 197 (303)
Q Consensus 172 eav~~ADIVILAVpP------~~v~~VL~eI~ 197 (303)
+.+.++|.|||+.|. ..+..+++.+.
T Consensus 50 ~~l~~~D~ii~gsP~y~g~~~~~~k~fld~~~ 81 (193)
T 3d7n_A 50 AALDAADAIIFGTPTYMGGPSWQFKKFADASS 81 (193)
T ss_dssp HHHHHCSEEEEEEEEETTEECHHHHHHHHHTH
T ss_pred HHHHHCCEEEEEeCccCCCccHHHHHHHHHhh
Confidence 456789999999984 45666776653
No 442
>3pff_A ATP-citrate synthase; phosphohistidine, organic acid, ATP-grAsp, lyase, transferas; HET: TLA ADP; 2.30A {Homo sapiens}
Probab=45.81 E-value=26 Score=36.86 Aligned_cols=54 Identities=9% Similarity=0.028 Sum_probs=39.3
Q ss_pred CCCeEecChHHhhc---CCCEEEEeeCCccHHHHHHhhccccCCCCEEEEecCCCcHH
Q psy6714 162 MGAKITFDNKEVTL---NSEVIILAVKPHIVPVALNDIKPVFNESNLLISVAGGVPIK 216 (303)
Q Consensus 162 ~Gv~v~~d~~eav~---~ADIVILAVpP~~v~~VL~eI~~~L~~g~IVVSiaaGV~ie 216 (303)
.|+.+..+..++.+ ++|+.|++||+..+.+++.+..... .=+.+|-++.|+...
T Consensus 548 ~Gvp~y~sv~ea~~~~p~~DlaVI~vP~~~v~~av~ea~~~~-Gvk~~Viis~Gf~e~ 604 (829)
T 3pff_A 548 ILIPVFKNMADAMRKHPEVDVLINFASLRSAYDSTMETMNYA-QIRTIAIIAEGIPEA 604 (829)
T ss_dssp EEEEEESSHHHHHHHCTTCCEEEECCCTTTHHHHHHHHTTST-TCCEEEECCSCCCHH
T ss_pred CCcccCCcHHHHhhccCCCcEEEEeCCHHHHHHHHHHHHhhC-CCCEEEEeCCCCCHH
Confidence 35667788888765 4899999999999999998875411 113455577899753
No 443
>1tt5_A APPBP1, amyloid protein-binding protein 1; cell cycle, ligase; 2.60A {Homo sapiens} SCOP: c.111.1.2 PDB: 3dbh_A 3dbl_A 3dbr_A 1r4m_A 1r4n_A* 2nvu_A* 1yov_A 3gzn_A*
Probab=45.74 E-value=27 Score=34.60 Aligned_cols=25 Identities=16% Similarity=0.202 Sum_probs=17.6
Q ss_pred HHhhcCCCEEEEeeCCccHHHHHHh
Q psy6714 171 KEVTLNSEVIILAVKPHIVPVALND 195 (303)
Q Consensus 171 ~eav~~ADIVILAVpP~~v~~VL~e 195 (303)
.+.+++.|+||.|+......-.+.+
T Consensus 119 ~~~~~~~DvVi~~~d~~~~r~~ln~ 143 (531)
T 1tt5_A 119 PSFFCRFTVVVATQLPESTSLRLAD 143 (531)
T ss_dssp GGGGGGCSEEEEESCCHHHHHHHHH
T ss_pred HHHhcCCCEEEEeCCCHHHHHHHHH
Confidence 3567889999999866555555544
No 444
>2gas_A Isoflavone reductase; NADPH-dependent reductase, oxidoreductase; 1.60A {Medicago sativa}
Probab=45.69 E-value=22 Score=30.95 Aligned_cols=55 Identities=15% Similarity=0.127 Sum_probs=34.0
Q ss_pred CCcEEEEc-CChhhHHHHHHHH-h---------hcH-------HH------HhhCCCeEe-c---C---hHHhhcCCCEE
Q psy6714 132 RSDKQIAG-TTERGPGALIASL-N---------IVS-------KA------TGTMGAKIT-F---D---NKEVTLNSEVI 180 (303)
Q Consensus 132 ~mkIgIIG-lG~MG~~~La~al-~---------r~~-------e~------l~e~Gv~v~-~---d---~~eav~~ADIV 180 (303)
||+|.|.| +|.+|.+ ++..+ + +.. ++ +...|+.+. . | ..++++.+|+|
T Consensus 2 ~~~vlVtGatG~iG~~-l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~~~l~~~~v~~v~~D~~d~~~l~~~~~~~d~v 80 (307)
T 2gas_A 2 ENKILILGPTGAIGRH-IVWASIKAGNPTYALVRKTITAANPETKEELIDNYQSLGVILLEGDINDHETLVKAIKQVDIV 80 (307)
T ss_dssp CCCEEEESTTSTTHHH-HHHHHHHHTCCEEEEECCSCCSSCHHHHHHHHHHHHHTTCEEEECCTTCHHHHHHHHTTCSEE
T ss_pred CcEEEEECCCchHHHH-HHHHHHhCCCcEEEEECCCcccCChHHHHHHHHHHHhCCCEEEEeCCCCHHHHHHHHhCCCEE
Confidence 67899998 6999994 55442 1 111 21 123466532 1 2 24567889999
Q ss_pred EEeeCCc
Q psy6714 181 ILAVKPH 187 (303)
Q Consensus 181 ILAVpP~ 187 (303)
|.+....
T Consensus 81 i~~a~~~ 87 (307)
T 2gas_A 81 ICAAGRL 87 (307)
T ss_dssp EECSSSS
T ss_pred EECCccc
Confidence 9998643
No 445
>1hdo_A Biliverdin IX beta reductase; foetal metabolism, HAEM degradation, flavin reductase, diaphorase, green HAEM binding protein; HET: NAP; 1.15A {Homo sapiens} SCOP: c.2.1.2 PDB: 1he2_A* 1he3_A* 1he4_A* 1he5_A*
Probab=45.68 E-value=27 Score=28.19 Aligned_cols=52 Identities=15% Similarity=0.162 Sum_probs=30.3
Q ss_pred CcEEEEc-CChhhHHHHHHHHhh----------cHHHHh---hCCCeEe----cC---hHHhhcCCCEEEEeeC
Q psy6714 133 SDKQIAG-TTERGPGALIASLNI----------VSKATG---TMGAKIT----FD---NKEVTLNSEVIILAVK 185 (303)
Q Consensus 133 mkIgIIG-lG~MG~~~La~al~r----------~~e~l~---e~Gv~v~----~d---~~eav~~ADIVILAVp 185 (303)
|+|.|+| .|.+|. .++..+-. ..+.+. ..++.+. .+ ..++++++|+||.+..
T Consensus 4 ~~ilVtGatG~iG~-~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~d~vi~~a~ 76 (206)
T 1hdo_A 4 KKIAIFGATGQTGL-TTLAQAVQAGYEVTVLVRDSSRLPSEGPRPAHVVVGDVLQAADVDKTVAGQDAVIVLLG 76 (206)
T ss_dssp CEEEEESTTSHHHH-HHHHHHHHTTCEEEEEESCGGGSCSSSCCCSEEEESCTTSHHHHHHHHTTCSEEEECCC
T ss_pred CEEEEEcCCcHHHH-HHHHHHHHCCCeEEEEEeChhhcccccCCceEEEEecCCCHHHHHHHHcCCCEEEECcc
Confidence 7899998 599999 46654321 112221 1234321 12 2356778999998875
No 446
>1qyd_A Pinoresinol-lariciresinol reductase; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.50A {Thuja plicata} SCOP: c.2.1.2
Probab=45.29 E-value=41 Score=29.28 Aligned_cols=54 Identities=22% Similarity=0.193 Sum_probs=33.7
Q ss_pred CCcEEEEc-CChhhHHHHHHHHh----------hc-----HHH------HhhCCCeEe----cC---hHHhhcCCCEEEE
Q psy6714 132 RSDKQIAG-TTERGPGALIASLN----------IV-----SKA------TGTMGAKIT----FD---NKEVTLNSEVIIL 182 (303)
Q Consensus 132 ~mkIgIIG-lG~MG~~~La~al~----------r~-----~e~------l~e~Gv~v~----~d---~~eav~~ADIVIL 182 (303)
+|+|.|+| +|.+|.. ++..+- +. .++ +...|+.+. .+ ..++++.+|+||.
T Consensus 4 ~~~ilVtGatG~iG~~-l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~~d~vi~ 82 (313)
T 1qyd_A 4 KSRVLIVGGTGYIGKR-IVNASISLGHPTYVLFRPEVVSNIDKVQMLLYFKQLGAKLIEASLDDHQRLVDALKQVDVVIS 82 (313)
T ss_dssp CCCEEEESTTSTTHHH-HHHHHHHTTCCEEEECCSCCSSCHHHHHHHHHHHTTTCEEECCCSSCHHHHHHHHTTCSEEEE
T ss_pred CCEEEEEcCCcHHHHH-HHHHHHhCCCcEEEEECCCcccchhHHHHHHHHHhCCeEEEeCCCCCHHHHHHHHhCCCEEEE
Confidence 67899998 7999994 554421 11 111 123466542 22 3456789999999
Q ss_pred eeCC
Q psy6714 183 AVKP 186 (303)
Q Consensus 183 AVpP 186 (303)
+...
T Consensus 83 ~a~~ 86 (313)
T 1qyd_A 83 ALAG 86 (313)
T ss_dssp CCCC
T ss_pred CCcc
Confidence 8853
No 447
>2fk8_A Methoxy mycolic acid synthase 4; S-adenosylmethionine-dependent methyltransferase fold, trans; HET: SAM; 2.00A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 2fk7_A* 3ha3_A* 3ha5_A* 3ha7_A*
Probab=44.70 E-value=81 Score=27.73 Aligned_cols=45 Identities=2% Similarity=-0.064 Sum_probs=29.3
Q ss_pred cChHHhhcCCCEEEEe-----eCCccHHHHHHhhccccCCC-CEEEEecCC
Q psy6714 168 FDNKEVTLNSEVIILA-----VKPHIVPVALNDIKPVFNES-NLLISVAGG 212 (303)
Q Consensus 168 ~d~~eav~~ADIVILA-----VpP~~v~~VL~eI~~~L~~g-~IVVSiaaG 212 (303)
.|..+.-...|+|+.. +++.....+++++...+++| .++++....
T Consensus 147 ~d~~~~~~~fD~v~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~ 197 (318)
T 2fk8_A 147 QGWEDFAEPVDRIVSIEAFEHFGHENYDDFFKRCFNIMPADGRMTVQSSVS 197 (318)
T ss_dssp SCGGGCCCCCSEEEEESCGGGTCGGGHHHHHHHHHHHSCTTCEEEEEEEEC
T ss_pred CChHHCCCCcCEEEEeChHHhcCHHHHHHHHHHHHHhcCCCcEEEEEEecc
Confidence 3433333568999887 55567788888888778765 555555443
No 448
>1e2b_A Enzyme IIB-cellobiose; phosphotransferase system, transferas transport, phosphorylation; NMR {Escherichia coli} SCOP: c.44.2.1 PDB: 1iib_A 1h9c_A* 2wwv_D 2wy2_D
Probab=43.95 E-value=35 Score=26.28 Aligned_cols=52 Identities=10% Similarity=0.098 Sum_probs=30.5
Q ss_pred CCcEEEE-cCChhhHHHHHHHHhhcHHHHhhCCCeEe------cChHHhhcCCCEEEEeeCCc
Q psy6714 132 RSDKQIA-GTTERGPGALIASLNIVSKATGTMGAKIT------FDNKEVTLNSEVIILAVKPH 187 (303)
Q Consensus 132 ~mkIgII-GlG~MG~~~La~al~r~~e~l~e~Gv~v~------~d~~eav~~ADIVILAVpP~ 187 (303)
|+||.++ |.| |++.+++. +-.+.+++.|+.+. .+..+.+.++|+|+++....
T Consensus 3 mkkIll~Cg~G-~sTS~l~~---k~~~~~~~~gi~~~i~a~~~~~~~~~~~~~Dvil~~pqv~ 61 (106)
T 1e2b_A 3 KKHIYLFSSAG-MSTSLLVS---KMRAQAEKYEVPVIIEAFPETLAGEKGQNADVVLLGPQIA 61 (106)
T ss_dssp CEEEEEECSSS-TTTHHHHH---HHHHHHHHSCCSEEEEEECSSSTTHHHHHCSEEEECTTSG
T ss_pred CcEEEEECCCc-hhHHHHHH---HHHHHHHHCCCCeEEEEecHHHHHhhccCCCEEEEccchh
Confidence 4678888 555 57733332 44455667776421 23344567789888775433
No 449
>2nvu_B Maltose binding protein/NEDD8-activating enzyme E1 catalytic subunit chimera; multifunction macromolecular complex, ubiquitin, ATP, conformational change, thioester, switch, adenylation, protein turnover, ligase; HET: ATP; 2.80A {Homo sapiens} SCOP: c.111.1.2 c.94.1.1
Probab=43.21 E-value=47 Score=34.10 Aligned_cols=26 Identities=15% Similarity=0.162 Sum_probs=18.5
Q ss_pred hHHhhcCCCEEEEeeCCccHHHHHHh
Q psy6714 170 NKEVTLNSEVIILAVKPHIVPVALND 195 (303)
Q Consensus 170 ~~eav~~ADIVILAVpP~~v~~VL~e 195 (303)
+.+.++++|+||.|+.....+..+..
T Consensus 494 ~~~~~~~~d~vv~~~d~~~~r~~in~ 519 (805)
T 2nvu_B 494 NDTFYRQFHIIVCGLDSIIARRWING 519 (805)
T ss_dssp CHHHHHTCSEEEECCSCHHHHHHHHH
T ss_pred HHHHHhcCCEEEECCCCHHHHHHHHH
Confidence 35678899999999876555544433
No 450
>1p0f_A NADP-dependent alcohol dehydrogenase; ADH topology, NADP(H)-dependent, oxidoreductase; HET: NAP; 1.80A {Rana perezi} SCOP: b.35.1.2 c.2.1.1 PDB: 1p0c_A*
Probab=43.17 E-value=43 Score=30.60 Aligned_cols=14 Identities=21% Similarity=0.079 Sum_probs=12.3
Q ss_pred CCcEEEEcCChhhH
Q psy6714 132 RSDKQIAGTTERGP 145 (303)
Q Consensus 132 ~mkIgIIGlG~MG~ 145 (303)
..+|.|+|.|.+|.
T Consensus 192 g~~VlV~GaG~vG~ 205 (373)
T 1p0f_A 192 GSTCAVFGLGGVGF 205 (373)
T ss_dssp TCEEEEECCSHHHH
T ss_pred CCEEEEECCCHHHH
Confidence 35799999999998
No 451
>3i6i_A Putative leucoanthocyanidin reductase 1; rossmann fold, short chain dehydrogenase reductase, flavonoi oxidoreductase; HET: NDP; 1.75A {Vitis vinifera} PDB: 3i5m_A 3i52_A* 3i6q_A*
Probab=42.85 E-value=38 Score=30.30 Aligned_cols=55 Identities=18% Similarity=0.136 Sum_probs=33.5
Q ss_pred CCcEEEEc-CChhhHHHHHHHHhh----------cH----H------HHhhCCCeEe-c---C---hHHhhc--CCCEEE
Q psy6714 132 RSDKQIAG-TTERGPGALIASLNI----------VS----K------ATGTMGAKIT-F---D---NKEVTL--NSEVII 181 (303)
Q Consensus 132 ~mkIgIIG-lG~MG~~~La~al~r----------~~----e------~l~e~Gv~v~-~---d---~~eav~--~ADIVI 181 (303)
+|+|.|.| +|.+|. .++..+.. .. + .+...|+.+. . | ..++++ ++|+||
T Consensus 10 ~~~IlVtGatG~iG~-~l~~~L~~~g~~V~~l~R~~~~~~~~~~~~~~l~~~~v~~~~~Dl~d~~~l~~~~~~~~~d~Vi 88 (346)
T 3i6i_A 10 KGRVLIAGATGFIGQ-FVATASLDAHRPTYILARPGPRSPSKAKIFKALEDKGAIIVYGLINEQEAMEKILKEHEIDIVV 88 (346)
T ss_dssp -CCEEEECTTSHHHH-HHHHHHHHTTCCEEEEECSSCCCHHHHHHHHHHHHTTCEEEECCTTCHHHHHHHHHHTTCCEEE
T ss_pred CCeEEEECCCcHHHH-HHHHHHHHCCCCEEEEECCCCCChhHHHHHHHHHhCCcEEEEeecCCHHHHHHHHhhCCCCEEE
Confidence 57899998 599999 46554311 11 1 1224566542 1 2 345677 899999
Q ss_pred EeeCCc
Q psy6714 182 LAVKPH 187 (303)
Q Consensus 182 LAVpP~ 187 (303)
.+....
T Consensus 89 ~~a~~~ 94 (346)
T 3i6i_A 89 STVGGE 94 (346)
T ss_dssp ECCCGG
T ss_pred ECCchh
Confidence 998653
No 452
>1ag9_A Flavodoxin; electron transport, reductive activation; HET: FMN BTB; 1.80A {Escherichia coli} SCOP: c.23.5.1 PDB: 1ahn_A*
Probab=42.78 E-value=1.3e+02 Score=24.24 Aligned_cols=27 Identities=7% Similarity=0.095 Sum_probs=18.8
Q ss_pred HhhcCCCEEEEeeCCcc-------HHHHHHhhcc
Q psy6714 172 EVTLNSEVIILAVKPHI-------VPVALNDIKP 198 (303)
Q Consensus 172 eav~~ADIVILAVpP~~-------v~~VL~eI~~ 198 (303)
+.+.+.|+|||++|-+. +.++++.+..
T Consensus 41 ~~l~~~d~ii~g~pt~~~G~~p~~~~~f~~~l~~ 74 (175)
T 1ag9_A 41 EDLEAYDILLLGIPTWYYGEAQCDWDDFFPTLEE 74 (175)
T ss_dssp HHHHTCSEEEEECCEETTTEECHHHHHHHHHHTT
T ss_pred hHhhhCCEEEEEEeecCCCcChHHHHHHHhhhhh
Confidence 34668999999998642 5566666543
No 453
>1y8q_B Anthracycline-, ubiquitin-like 2 activating enzyme E1B; SUMO, heterodimer, UBL, ligase; HET: ATP; 2.25A {Homo sapiens} PDB: 1y8r_B* 3kyc_B* 3kyd_B* 2px9_A
Probab=42.55 E-value=43 Score=34.21 Aligned_cols=25 Identities=12% Similarity=0.033 Sum_probs=18.3
Q ss_pred HHhhcCCCEEEEeeCCccHHHHHHh
Q psy6714 171 KEVTLNSEVIILAVKPHIVPVALND 195 (303)
Q Consensus 171 ~eav~~ADIVILAVpP~~v~~VL~e 195 (303)
.+.+.++|+||.|+.....+-.+..
T Consensus 103 ~~~~~~~DlVvda~Dn~~aR~~ln~ 127 (640)
T 1y8q_B 103 VEFFRQFILVMNALDNRAARNHVNR 127 (640)
T ss_dssp HHHHTTCSEEEECCSCHHHHHHHHH
T ss_pred HhhhcCCCEEEECCCCHHHHHHHHH
Confidence 4667899999999976555555544
No 454
>3e05_A Precorrin-6Y C5,15-methyltransferase (decarboxyla; porphyrin metabolism, S-adenosyl-methionine; 1.80A {Geobacter metallireducens} SCOP: c.66.1.0
Probab=42.17 E-value=96 Score=25.19 Aligned_cols=35 Identities=0% Similarity=0.199 Sum_probs=26.4
Q ss_pred cCCCEEEEeeCCccHHHHHHhhccccCCCC-EEEEe
Q psy6714 175 LNSEVIILAVKPHIVPVALNDIKPVFNESN-LLISV 209 (303)
Q Consensus 175 ~~ADIVILAVpP~~v~~VL~eI~~~L~~g~-IVVSi 209 (303)
...|+||+.........+++++...++++- ++++.
T Consensus 107 ~~~D~i~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~ 142 (204)
T 3e05_A 107 PDPDRVFIGGSGGMLEEIIDAVDRRLKSEGVIVLNA 142 (204)
T ss_dssp CCCSEEEESCCTTCHHHHHHHHHHHCCTTCEEEEEE
T ss_pred CCCCEEEECCCCcCHHHHHHHHHHhcCCCeEEEEEe
Confidence 568999998776688889988888887655 44443
No 455
>3q98_A Transcarbamylase; rossmann fold, transferase; 2.00A {Escherichia coli}
Probab=42.12 E-value=41 Score=32.29 Aligned_cols=24 Identities=8% Similarity=0.163 Sum_probs=19.0
Q ss_pred hCCC--eEecChHHhhcCCCEEEEee
Q psy6714 161 TMGA--KITFDNKEVTLNSEVIILAV 184 (303)
Q Consensus 161 e~Gv--~v~~d~~eav~~ADIVILAV 184 (303)
+.|. .++.|+.++++++|||..-+
T Consensus 249 ~~G~~i~~~~d~~eav~~aDvVytd~ 274 (399)
T 3q98_A 249 ASGGSFRQVTSMEEAFKDADIVYPKS 274 (399)
T ss_dssp HHTCEEEEESCHHHHHTTCSEEEECC
T ss_pred HcCCEEEEEcCHHHHhCCCCEEEecC
Confidence 4564 46789999999999998765
No 456
>3t4e_A Quinate/shikimate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 1.95A {Salmonella enterica subsp} PDB: 1npd_A* 1o9b_A* 1vi2_A*
Probab=41.87 E-value=23 Score=32.63 Aligned_cols=108 Identities=14% Similarity=0.150 Sum_probs=53.2
Q ss_pred CCCcEEEEcCChhhHHHHHHHH-----------hhc---HHHHh--------hCCCeE--e--cCh---HHhhcCCCEEE
Q psy6714 131 NRSDKQIAGTTERGPGALIASL-----------NIV---SKATG--------TMGAKI--T--FDN---KEVTLNSEVII 181 (303)
Q Consensus 131 ~~mkIgIIGlG~MG~~~La~al-----------~r~---~e~l~--------e~Gv~v--~--~d~---~eav~~ADIVI 181 (303)
...++.|+|.|.+|.+ ++..+ ++. .++++ ..+..+ . .+. .+.+.++|+||
T Consensus 147 ~gk~~lVlGAGGaara-ia~~L~~~G~~~v~v~nRt~~~~~~a~~la~~~~~~~~~~v~~~~~~~l~~~~~~l~~~DiII 225 (312)
T 3t4e_A 147 RGKTMVLLGAGGAATA-IGAQAAIEGIKEIKLFNRKDDFFEKAVAFAKRVNENTDCVVTVTDLADQHAFTEALASADILT 225 (312)
T ss_dssp TTCEEEEECCSHHHHH-HHHHHHHTTCSEEEEEECSSTHHHHHHHHHHHHHHHSSCEEEEEETTCHHHHHHHHHHCSEEE
T ss_pred CCCEEEEECcCHHHHH-HHHHHHHcCCCEEEEEECCCchHHHHHHHHHHhhhccCcceEEechHhhhhhHhhccCceEEE
Confidence 3567999999999984 44332 233 33221 123322 1 222 34567899999
Q ss_pred EeeCCccHHHHHHhh---ccccCCCCEEEEec-CCCcHHHHHhhCCCCCceEEEecCcHHhhhCC
Q psy6714 182 LAVKPHIVPVALNDI---KPVFNESNLLISVA-GGVPIKNMEQALPKNSRIIRAMPNTPALVRQG 242 (303)
Q Consensus 182 LAVpP~~v~~VL~eI---~~~L~~g~IVVSia-aGV~ie~L~~~l~~~~~VVr~mPn~p~~v~~G 242 (303)
=|+|.-.-...-..+ ...+.++.+|+.++ ++....-|+..-..++ +++....+.+.|+
T Consensus 226 NaTp~Gm~~~~~~~~~~~~~~l~~~~~v~D~vY~P~~T~ll~~A~~~G~---~~~~Gl~MLv~Qa 287 (312)
T 3t4e_A 226 NGTKVGMKPLENESLIGDVSLLRPELLVTECVYNPHMTKLLQQAQQAGC---KTIDGYGMLLWQG 287 (312)
T ss_dssp ECSSTTSTTSTTCCSCCCGGGSCTTCEEEECCCSSSSCHHHHHHHHTTC---EEECHHHHHHHHH
T ss_pred ECCcCCCCCCCCCcccCCHHHcCCCCEEEEeccCCCCCHHHHHHHHCCC---eEECcHHHHHHHH
Confidence 888743210000011 12355666666654 3333333333222122 4455556665554
No 457
>3hm2_A Precorrin-6Y C5,15-methyltransferase; alpha-beta-sandwich, structural genomics, PSI-2, protein structure initiative; 2.21A {Corynebacterium diphtheriae}
Probab=41.80 E-value=88 Score=24.41 Aligned_cols=35 Identities=14% Similarity=0.114 Sum_probs=20.8
Q ss_pred cCCCEEEEeeCCccHHHHHHhhccccCCC-CEEEEec
Q psy6714 175 LNSEVIILAVKPHIVPVALNDIKPVFNES-NLLISVA 210 (303)
Q Consensus 175 ~~ADIVILAVpP~~v~~VL~eI~~~L~~g-~IVVSia 210 (303)
...|+||+.-.... ..+++++...++++ .++++..
T Consensus 93 ~~~D~i~~~~~~~~-~~~l~~~~~~L~~gG~l~~~~~ 128 (178)
T 3hm2_A 93 DNPDVIFIGGGLTA-PGVFAAAWKRLPVGGRLVANAV 128 (178)
T ss_dssp SCCSEEEECC-TTC-TTHHHHHHHTCCTTCEEEEEEC
T ss_pred CCCCEEEECCcccH-HHHHHHHHHhcCCCCEEEEEee
Confidence 45899887765444 55666666666654 4444443
No 458
>4h31_A Otcase, ornithine carbamoyltransferase; structural genomics, niaid, national institute of allergy AN infectious diseases; HET: PE5; 1.70A {Vibrio vulnificus} PDB: 3upd_A*
Probab=41.80 E-value=45 Score=31.43 Aligned_cols=54 Identities=11% Similarity=0.115 Sum_probs=34.0
Q ss_pred ccCCCcEEEEcCC--hhhHHHHHHHHhhc----------------------HHHHhhCCC--eEecChHHhhcCCCEEEE
Q psy6714 129 RWNRSDKQIAGTT--ERGPGALIASLNIV----------------------SKATGTMGA--KITFDNKEVTLNSEVIIL 182 (303)
Q Consensus 129 ~~~~mkIgIIGlG--~MG~~~La~al~r~----------------------~e~l~e~Gv--~v~~d~~eav~~ADIVIL 182 (303)
.+...||+|||=| ++.. +++..+.+. .+.+.+.|. .++.|+.++++++|+|..
T Consensus 178 ~l~gl~ia~vGD~~~~va~-S~~~~~~~~g~~v~~~~P~~~~p~~~~~~~~~~~~~~~g~~v~~~~d~~eav~~aDvvyt 256 (358)
T 4h31_A 178 ALADIQFAYLGDARNNVGN-SLMVGAAKMGMDIRLVGPQAYWPDEELVAACQAIAKQTGGKITLTENVAEGVQGCDFLYT 256 (358)
T ss_dssp CGGGCEEEEESCTTSHHHH-HHHHHHHHHTCEEEEESCGGGSCCHHHHHHHHHHHHHHTCEEEEESCHHHHHTTCSEEEE
T ss_pred CcCceEEEecCCCCcccch-HHHHHHHhcCceEEEeCCcccCCCHHHHHHHHHHHHHcCCcceeccCHHHHhccCcEEEE
Confidence 3457899999954 5666 555432110 011234454 467889999999999884
Q ss_pred e
Q psy6714 183 A 183 (303)
Q Consensus 183 A 183 (303)
-
T Consensus 257 ~ 257 (358)
T 4h31_A 257 D 257 (358)
T ss_dssp C
T ss_pred E
Confidence 3
No 459
>4b4o_A Epimerase family protein SDR39U1; isomerase; HET: NDP PE4; 2.70A {Homo sapiens}
Probab=41.61 E-value=23 Score=30.92 Aligned_cols=18 Identities=22% Similarity=0.161 Sum_probs=14.4
Q ss_pred CcEEEEc-CChhhHHHHHHH
Q psy6714 133 SDKQIAG-TTERGPGALIAS 151 (303)
Q Consensus 133 mkIgIIG-lG~MG~~~La~a 151 (303)
|||.|.| +|-+|.+ |+..
T Consensus 1 MkILVTGatGfIG~~-L~~~ 19 (298)
T 4b4o_A 1 MRVLVGGGTGFIGTA-LTQL 19 (298)
T ss_dssp CEEEEETTTSHHHHH-HHHH
T ss_pred CEEEEECCCCHHHHH-HHHH
Confidence 8999998 5999994 6544
No 460
>1tt5_B Ubiquitin-activating enzyme E1C isoform 1; cell cycle, ligase; 2.60A {Homo sapiens} SCOP: c.111.1.2 PDB: 3dbl_B 3dbr_B 3dbh_B 3gzn_B* 1yov_B 1r4m_B 1r4n_B*
Probab=41.20 E-value=27 Score=33.78 Aligned_cols=25 Identities=12% Similarity=0.118 Sum_probs=18.3
Q ss_pred HHhhcCCCEEEEeeCCccHHHHHHh
Q psy6714 171 KEVTLNSEVIILAVKPHIVPVALND 195 (303)
Q Consensus 171 ~eav~~ADIVILAVpP~~v~~VL~e 195 (303)
.+.++++|+||.|+.....+..+..
T Consensus 124 ~~~~~~~DlVi~~~Dn~~~R~~in~ 148 (434)
T 1tt5_B 124 DTFYRQFHIIVCGLDSIIARRWING 148 (434)
T ss_dssp HHHHTTCSEEEECCSCHHHHHHHHH
T ss_pred HHHhcCCCEEEECCCCHHHHHHHHH
Confidence 5678899999999876655544433
No 461
>3i3l_A Alkylhalidase CMLS; flavin-dependent halogenase, chloramphenicol biosynthesis, halogenation reaction, structural genomics; HET: FAD; 2.20A {Streptomyces venezuelae}
Probab=40.90 E-value=15 Score=36.67 Aligned_cols=33 Identities=21% Similarity=0.122 Sum_probs=15.3
Q ss_pred CCCCCCCcccccCC---CcEEEEcCChhhHHHHHHHH
Q psy6714 119 APTTPSSREARWNR---SDKQIAGTTERGPGALIASL 152 (303)
Q Consensus 119 ~~~~~~~~~~~~~~---mkIgIIGlG~MG~~~La~al 152 (303)
.++++.++..+..+ .+|.|||.|..|. +++..+
T Consensus 7 ~~~~~~~~~~~~~~M~~~DVvIVGgG~AGl-~aA~~L 42 (591)
T 3i3l_A 7 HHHHSSGLVPRGSHMTRSKVAIIGGGPAGS-VAGLTL 42 (591)
T ss_dssp -------------CCCCCEEEEECCSHHHH-HHHHHH
T ss_pred CCCCCCCCCCCcCcCCCCCEEEECcCHHHH-HHHHHH
Confidence 33444444333333 3799999999998 566543
No 462
>2yfk_A Aspartate/ornithine carbamoyltransferase; transcarbamylase; 2.55A {Enterococcus faecalis}
Probab=40.76 E-value=42 Score=32.44 Aligned_cols=24 Identities=17% Similarity=0.160 Sum_probs=19.5
Q ss_pred hCCC--eEecChHHhhcCCCEEEEee
Q psy6714 161 TMGA--KITFDNKEVTLNSEVIILAV 184 (303)
Q Consensus 161 e~Gv--~v~~d~~eav~~ADIVILAV 184 (303)
+.|. .++.|+.++++++|||..-+
T Consensus 246 ~~G~~v~~~~d~~eav~~ADVVytd~ 271 (418)
T 2yfk_A 246 EFGGNFTKTNSMAEAFKDADVVYPKS 271 (418)
T ss_dssp HHSSEEEEESCHHHHHTTCSEEEECC
T ss_pred HcCCEEEEEcCHHHHhcCCCEEEEcc
Confidence 4574 56788999999999998865
No 463
>1vkr_A Mannitol-specific PTS system enzyme iiabc compone; phosphotransferase, transferase, kinase, sugar transport; NMR {Escherichia coli} SCOP: c.44.2.1 PDB: 1vrv_A* 2few_B*
Probab=40.71 E-value=29 Score=27.59 Aligned_cols=52 Identities=15% Similarity=0.180 Sum_probs=29.1
Q ss_pred CCcEEEEcCChhhHHHHHHHHhhcHHHHhhCCC---eEe-cChHHhhcCCCEEEEeeC
Q psy6714 132 RSDKQIAGTTERGPGALIASLNIVSKATGTMGA---KIT-FDNKEVTLNSEVIILAVK 185 (303)
Q Consensus 132 ~mkIgIIGlG~MG~~~La~al~r~~e~l~e~Gv---~v~-~d~~eav~~ADIVILAVp 185 (303)
++||.++=...||+.+|+.. +..+.+.+.|+ .+. .+..++-.++|+||..++
T Consensus 13 ~kkIlvVC~sGmgTS~ml~~--klkk~~~e~gi~~~~V~~~~i~e~~~~~DlIist~~ 68 (125)
T 1vkr_A 13 VRKIIVACDAGMGSSAMGAG--VLRKKIQDAGLSQISVTNSAINNLPPDVDLVITHRD 68 (125)
T ss_dssp CCEEEECCSSSSHHHHHHHH--HHHHHHHHTTCTTSEEEECCTTCCCTTCSEEEEEHH
T ss_pred ccEEEEECCCcHHHHHHHHH--HHHHHHHHCCCceEEEEEeeHHHCCCCCCEEEECCc
Confidence 67898885556787444322 33344556666 222 233333347898888863
No 464
>2q62_A ARSH; alpha/beta, flavoprotein; 1.80A {Sinorhizobium meliloti}
Probab=39.89 E-value=40 Score=29.80 Aligned_cols=15 Identities=20% Similarity=0.160 Sum_probs=10.8
Q ss_pred HhhcCCCEEEEeeCC
Q psy6714 172 EVTLNSEVIILAVKP 186 (303)
Q Consensus 172 eav~~ADIVILAVpP 186 (303)
+.+..||.||+++|-
T Consensus 94 ~~i~~AD~iI~~sP~ 108 (247)
T 2q62_A 94 ELSIWSEGQVWVSPE 108 (247)
T ss_dssp HHHHHCSEEEEEEEC
T ss_pred HHHHHCCEEEEEeCC
Confidence 455678888888873
No 465
>3uko_A Alcohol dehydrogenase class-3; alcohol dehydrogenase III, homodimer, reduction of GSNO, NAD binding, oxidoreductase; HET: NAD SO4; 1.40A {Arabidopsis thaliana}
Probab=39.50 E-value=50 Score=30.26 Aligned_cols=14 Identities=29% Similarity=0.230 Sum_probs=12.3
Q ss_pred CCcEEEEcCChhhH
Q psy6714 132 RSDKQIAGTTERGP 145 (303)
Q Consensus 132 ~mkIgIIGlG~MG~ 145 (303)
..+|.|+|.|.+|.
T Consensus 194 g~~VlV~GaG~vG~ 207 (378)
T 3uko_A 194 GSNVAIFGLGTVGL 207 (378)
T ss_dssp TCCEEEECCSHHHH
T ss_pred CCEEEEECCCHHHH
Confidence 45799999999998
No 466
>3sc6_A DTDP-4-dehydrorhamnose reductase; RFBD, structural genomics, infectious diseases, bacillus anthracis STR. AMES, rhamnose biosynthetic pathway; HET: NAP; 2.65A {Bacillus anthracis} SCOP: c.2.1.0
Probab=39.28 E-value=20 Score=30.92 Aligned_cols=46 Identities=20% Similarity=0.224 Sum_probs=27.8
Q ss_pred CCcEEEEc-CChhhHHHHHHHHhhcHHHHhhCCCeEe------------cChHHhhc--CCCEEEEeeC
Q psy6714 132 RSDKQIAG-TTERGPGALIASLNIVSKATGTMGAKIT------------FDNKEVTL--NSEVIILAVK 185 (303)
Q Consensus 132 ~mkIgIIG-lG~MG~~~La~al~r~~e~l~e~Gv~v~------------~d~~eav~--~ADIVILAVp 185 (303)
+|||.|.| .|.+|. .++..+ .+.|..+. .+..++++ .+|+||-+.-
T Consensus 5 ~m~ilVtGatG~iG~-~l~~~L-------~~~g~~V~~~~r~~~D~~d~~~~~~~~~~~~~d~vi~~a~ 65 (287)
T 3sc6_A 5 KERVIITGANGQLGK-QLQEEL-------NPEEYDIYPFDKKLLDITNISQVQQVVQEIRPHIIIHCAA 65 (287)
T ss_dssp CEEEEEESTTSHHHH-HHHHHS-------CTTTEEEEEECTTTSCTTCHHHHHHHHHHHCCSEEEECCC
T ss_pred eeEEEEECCCCHHHH-HHHHHH-------HhCCCEEEEecccccCCCCHHHHHHHHHhcCCCEEEECCc
Confidence 35899998 799999 455432 22233221 12234555 5999998864
No 467
>1e3i_A Alcohol dehydrogenase, class II; HET: NAD; 2.08A {Mus musculus} SCOP: b.35.1.2 c.2.1.1 PDB: 1e3e_A* 1e3l_A* 3cos_A*
Probab=39.18 E-value=54 Score=30.00 Aligned_cols=14 Identities=21% Similarity=0.062 Sum_probs=12.2
Q ss_pred CCcEEEEcCChhhH
Q psy6714 132 RSDKQIAGTTERGP 145 (303)
Q Consensus 132 ~mkIgIIGlG~MG~ 145 (303)
..+|.|+|.|.+|.
T Consensus 196 g~~VlV~GaG~vG~ 209 (376)
T 1e3i_A 196 GSTCAVFGLGCVGL 209 (376)
T ss_dssp TCEEEEECCSHHHH
T ss_pred CCEEEEECCCHHHH
Confidence 35799999999998
No 468
>3aog_A Glutamate dehydrogenase; NAD(H), oxidoreducta; HET: GLU; 2.10A {Thermus thermophilus HB27} PDB: 3aoe_A
Probab=38.91 E-value=43 Score=32.63 Aligned_cols=98 Identities=12% Similarity=0.118 Sum_probs=50.8
Q ss_pred cCCCcEEEEcCChhhHHHHHHHHhh---------------------cHHHH---h-hCC-------CeEecChHHhh-cC
Q psy6714 130 WNRSDKQIAGTTERGPGALIASLNI---------------------VSKAT---G-TMG-------AKITFDNKEVT-LN 176 (303)
Q Consensus 130 ~~~mkIgIIGlG~MG~~~La~al~r---------------------~~e~l---~-e~G-------v~v~~d~~eav-~~ 176 (303)
+..++|.|.|.|++|.. ++..+.+ +.+.+ + +.| .+. .++.++. .+
T Consensus 233 l~g~~vaVqGfGnVG~~-~a~~L~e~GakvVavsD~~G~i~dp~Gld~~~l~~~~~~~g~i~~y~~a~~-i~~~ei~~~~ 310 (440)
T 3aog_A 233 VEGARVAIQGFGNVGNA-AARAFHDHGARVVAVQDHTGTVYNEAGIDPYDLLRHVQEFGGVRGYPKAEP-LPAADFWGLP 310 (440)
T ss_dssp STTCEEEEECCSHHHHH-HHHHHHHTTCEEEEEECSSCEEECTTCCCHHHHHHHHHHTSSSTTCTTSEE-CCHHHHTTCC
T ss_pred ccCCEEEEeccCHHHHH-HHHHHHHCCCEEEEEEcCCcEEECCCCCCHHHHHHHHHhcCCcccCCCceE-cCchhhhcCC
Confidence 34678999999999994 4433211 11111 1 222 222 2344543 37
Q ss_pred CCEEEEeeCCccHHHHHHhhccccCCCCEEEEecCCCcHHHHHhhCCCCCceEEEecCc
Q psy6714 177 SEVIILAVKPHIVPVALNDIKPVFNESNLLISVAGGVPIKNMEQALPKNSRIIRAMPNT 235 (303)
Q Consensus 177 ADIVILAVpP~~v~~VL~eI~~~L~~g~IVVSiaaGV~ie~L~~~l~~~~~VVr~mPn~ 235 (303)
|||+|-|-....+. .+-.+.+ .-++|+--+++-....-.+.|.. +-|.++|..
T Consensus 311 ~DIlvPcA~~n~i~---~~na~~l-~ak~VvEgAN~p~t~eA~~iL~~--~GI~~~PD~ 363 (440)
T 3aog_A 311 VEFLVPAALEKQIT---EQNAWRI-RARIVAEGANGPTTPAADDILLE--KGVLVVPDV 363 (440)
T ss_dssp CSEEEECSSSSCBC---TTTGGGC-CCSEEECCSSSCBCHHHHHHHHH--HTCEEECHH
T ss_pred CcEEEecCCcCccc---hhhHHHc-CCcEEEecCccccCHHHHHHHHH--CCCEEEChH
Confidence 99999997655443 1222234 34677766655443333333421 235566654
No 469
>2wm3_A NMRA-like family domain containing protein 1; unknown function; HET: NAP NFL; 1.85A {Homo sapiens} PDB: 2wmd_A* 2exx_A* 3dxf_A 3e5m_A
Probab=38.13 E-value=49 Score=28.74 Aligned_cols=53 Identities=15% Similarity=0.130 Sum_probs=32.2
Q ss_pred CCcEEEEc-CChhhHHHHHHHH-hh----------cH-----HHHhhCCCeEe----cC---hHHhhcCCCEEEEeeC
Q psy6714 132 RSDKQIAG-TTERGPGALIASL-NI----------VS-----KATGTMGAKIT----FD---NKEVTLNSEVIILAVK 185 (303)
Q Consensus 132 ~mkIgIIG-lG~MG~~~La~al-~r----------~~-----e~l~e~Gv~v~----~d---~~eav~~ADIVILAVp 185 (303)
+|+|.|.| +|.+|. .++..+ +. .. +.+...|+.+. .| ..++++.+|+||.+..
T Consensus 5 ~~~ilVtGatG~iG~-~l~~~L~~~g~~~V~~~~R~~~~~~~~~l~~~~~~~~~~D~~d~~~l~~~~~~~d~vi~~a~ 81 (299)
T 2wm3_A 5 KKLVVVFGGTGAQGG-SVARTLLEDGTFKVRVVTRNPRKKAAKELRLQGAEVVQGDQDDQVIMELALNGAYATFIVTN 81 (299)
T ss_dssp CCEEEEETTTSHHHH-HHHHHHHHHCSSEEEEEESCTTSHHHHHHHHTTCEEEECCTTCHHHHHHHHTTCSEEEECCC
T ss_pred CCEEEEECCCchHHH-HHHHHHHhcCCceEEEEEcCCCCHHHHHHHHCCCEEEEecCCCHHHHHHHHhcCCEEEEeCC
Confidence 57899998 599999 455442 11 11 11233466432 12 2356788999999874
No 470
>2jhf_A Alcohol dehydrogenase E chain; oxidoreductase, metal coordination, NAD, zinc, inhibition, acetylation, metal-binding; HET: NAD; 1.0A {Equus caballus} SCOP: b.35.1.2 c.2.1.1 PDB: 1adc_A* 1adf_A* 1adg_A* 1adb_A* 1bto_A* 1heu_A* 1hf3_A* 1hld_A* 1lde_A* 1ldy_A* 1mg0_A* 1n92_A* 1p1r_A* 1ye3_A 1het_A* 2jhg_A* 2ohx_A* 2oxi_A* 3bto_A* 4dwv_A* ...
Probab=38.10 E-value=61 Score=29.58 Aligned_cols=14 Identities=21% Similarity=0.114 Sum_probs=12.2
Q ss_pred CCcEEEEcCChhhH
Q psy6714 132 RSDKQIAGTTERGP 145 (303)
Q Consensus 132 ~mkIgIIGlG~MG~ 145 (303)
..+|.|+|.|.+|.
T Consensus 192 g~~VlV~GaG~vG~ 205 (374)
T 2jhf_A 192 GSTCAVFGLGGVGL 205 (374)
T ss_dssp TCEEEEECCSHHHH
T ss_pred CCEEEEECCCHHHH
Confidence 35799999999998
No 471
>1ryi_A Glycine oxidase; flavoprotein, protein-inhibitor complex, oxidoreductase; HET: FAD; 1.80A {Bacillus subtilis} SCOP: c.3.1.2 d.16.1.3 PDB: 3if9_A* 1ng4_A* 1ng3_A*
Probab=37.74 E-value=17 Score=32.80 Aligned_cols=19 Identities=16% Similarity=0.149 Sum_probs=15.3
Q ss_pred CCcEEEEcCChhhHHHHHHH
Q psy6714 132 RSDKQIAGTTERGPGALIAS 151 (303)
Q Consensus 132 ~mkIgIIGlG~MG~~~La~a 151 (303)
+.+|.|||.|..|. +++..
T Consensus 17 ~~dvvIIGgG~~Gl-~~A~~ 35 (382)
T 1ryi_A 17 HYEAVVIGGGIIGS-AIAYY 35 (382)
T ss_dssp EEEEEEECCSHHHH-HHHHH
T ss_pred CCCEEEECcCHHHH-HHHHH
Confidence 56899999999998 55544
No 472
>1pjq_A CYSG, siroheme synthase; rossman fold, nucleotide binding motif, SAM, NAD, phosphoserine, transferase/oxidoreductase/lyase complex; HET: SEP PGE SAH; 2.21A {Salmonella typhimurium} SCOP: c.2.1.11 c.90.1.1 e.37.1.1 PDB: 1pjs_A* 1pjt_A*
Probab=37.14 E-value=78 Score=30.36 Aligned_cols=59 Identities=12% Similarity=-0.033 Sum_probs=34.4
Q ss_pred cCCCcEEEEcCChhhHHHHHHHHhh-----------c-H--HHHh-hCCCeEec-C-hHHhhcCCCEEEEeeCCccH
Q psy6714 130 WNRSDKQIAGTTERGPGALIASLNI-----------V-S--KATG-TMGAKITF-D-NKEVTLNSEVIILAVKPHIV 189 (303)
Q Consensus 130 ~~~mkIgIIGlG~MG~~~La~al~r-----------~-~--e~l~-e~Gv~v~~-d-~~eav~~ADIVILAVpP~~v 189 (303)
+..++|.|||.|.+|.. .+..+.+ . . +.+. +.++.+.. . ..+.++++|+||.++....+
T Consensus 10 l~~~~vlVvGgG~va~~-k~~~L~~~ga~V~vi~~~~~~~~~~l~~~~~i~~~~~~~~~~~l~~~~lVi~at~~~~~ 85 (457)
T 1pjq_A 10 LRDRDCLIVGGGDVAER-KARLLLEAGARLTVNALTFIPQFTVWANEGMLTLVEGPFDETLLDSCWLAIAATDDDTV 85 (457)
T ss_dssp CBTCEEEEECCSHHHHH-HHHHHHHTTBEEEEEESSCCHHHHHHHTTTSCEEEESSCCGGGGTTCSEEEECCSCHHH
T ss_pred CCCCEEEEECCCHHHHH-HHHHHHhCcCEEEEEcCCCCHHHHHHHhcCCEEEEECCCCccccCCccEEEEcCCCHHH
Confidence 45689999999999984 3333211 0 1 1222 23454422 1 23346789999999865543
No 473
>2lnd_A De novo designed protein, PFK fold; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Artificial gene}
Probab=36.90 E-value=1.1e+02 Score=23.31 Aligned_cols=77 Identities=17% Similarity=0.231 Sum_probs=46.2
Q ss_pred CCEEEEeeCCccHHHHHHhhccccCCCCEEEEecCCCcHHHHHhhCCCCCceEEEecCcHHhhhCCcEEEEeCCCCCHHH
Q psy6714 177 SEVIILAVKPHIVPVALNDIKPVFNESNLLISVAGGVPIKNMEQALPKNSRIIRAMPNTPALVRQGASVFVRGSSASDQD 256 (303)
Q Consensus 177 ADIVILAVpP~~v~~VL~eI~~~L~~g~IVVSiaaGV~ie~L~~~l~~~~~VVr~mPn~p~~v~~G~til~~g~~~~~e~ 256 (303)
.-+|-.++..++++++++.+++ .|+.+|-.++|.+...+.+... .+-.+|+.-=+.-....++.
T Consensus 28 gryirtatssqdirdiiksmkd---ngkplvvfvngasqndvnefqn-------------eakkegvsydvlkstdpeel 91 (112)
T 2lnd_A 28 GRYIRTATSSQDIRDIIKSMKD---NGKPLVVFVNGASQNDVNEFQN-------------EAKKEGVSYDVLKSTDPEEL 91 (112)
T ss_dssp TTTEEEECSHHHHHHHHHHHTT---CCSCEEEEECSCCHHHHHHHHH-------------HHHHHTCEEEEEECCCHHHH
T ss_pred CceeeeccchhhHHHHHHHHHh---cCCeEEEEecCcccccHHHHHH-------------HHHhcCcchhhhccCCHHHH
Confidence 3456667777888888888775 4444555777887766555332 11223443212212224556
Q ss_pred HHHHHHHHHhcCC
Q psy6714 257 AQTVINLFKSVGT 269 (303)
Q Consensus 257 ~e~V~~Lfs~iG~ 269 (303)
.+.|.+++...|.
T Consensus 92 tqrvreflktags 104 (112)
T 2lnd_A 92 TQRVREFLKTAGS 104 (112)
T ss_dssp HHHHHHHHHHTTS
T ss_pred HHHHHHHHHhccc
Confidence 6889999999885
No 474
>2m1z_A LMO0427 protein; homolog PTS system IIB component, transferase; NMR {Listeria monocytogenes egd-e}
Probab=36.43 E-value=71 Score=24.96 Aligned_cols=16 Identities=31% Similarity=0.335 Sum_probs=12.8
Q ss_pred HhhcCCCEEEEeeCCc
Q psy6714 172 EVTLNSEVIILAVKPH 187 (303)
Q Consensus 172 eav~~ADIVILAVpP~ 187 (303)
+.++.+|+|||+..-.
T Consensus 53 ~~I~~AD~VIia~d~~ 68 (106)
T 2m1z_A 53 KDVNIGEVVIFAVDTK 68 (106)
T ss_dssp HHHHHCSEEEEEESSC
T ss_pred HHHhhCCEEEEecccc
Confidence 5577899999998643
No 475
>1nvt_A Shikimate 5'-dehydrogenase; structural genomics, PSI, protein structure initiative; HET: NAP; 2.35A {Methanocaldococcus jannaschii} SCOP: c.2.1.7 c.58.1.5
Probab=36.40 E-value=30 Score=30.80 Aligned_cols=78 Identities=14% Similarity=0.109 Sum_probs=41.2
Q ss_pred CCCcEEEEcCChhhHHHHHHHH---------hhcHHHHh----hCC----------CeEecChHHhhcCCCEEEEeeCCc
Q psy6714 131 NRSDKQIAGTTERGPGALIASL---------NIVSKATG----TMG----------AKITFDNKEVTLNSEVIILAVKPH 187 (303)
Q Consensus 131 ~~mkIgIIGlG~MG~~~La~al---------~r~~e~l~----e~G----------v~v~~d~~eav~~ADIVILAVpP~ 187 (303)
..+++.|+|.|.||.+ ++..+ ++..+++. +++ +.+ .+..+.+.++|+||-+++..
T Consensus 127 ~~k~vlV~GaGgiG~a-ia~~L~~~G~V~v~~r~~~~~~~l~~~~~~~~~~~~~~~~d~-~~~~~~~~~~DilVn~ag~~ 204 (287)
T 1nvt_A 127 KDKNIVIYGAGGAARA-VAFELAKDNNIIIANRTVEKAEALAKEIAEKLNKKFGEEVKF-SGLDVDLDGVDIIINATPIG 204 (287)
T ss_dssp CSCEEEEECCSHHHHH-HHHHHTSSSEEEEECSSHHHHHHHHHHHHHHHTCCHHHHEEE-ECTTCCCTTCCEEEECSCTT
T ss_pred CCCEEEEECchHHHHH-HHHHHHHCCCEEEEECCHHHHHHHHHHHhhhcccccceeEEE-eeHHHhhCCCCEEEECCCCC
Confidence 3567999999999984 54442 12222111 110 112 22244567899999998744
Q ss_pred cHHHHH-Hhh--ccccCCCCEEEEec
Q psy6714 188 IVPVAL-NDI--KPVFNESNLLISVA 210 (303)
Q Consensus 188 ~v~~VL-~eI--~~~L~~g~IVVSia 210 (303)
....+- ..+ ...++++.+|+.+.
T Consensus 205 ~~~~~~~~~~~~~~~l~~~~~v~Dv~ 230 (287)
T 1nvt_A 205 MYPNIDVEPIVKAEKLREDMVVMDLI 230 (287)
T ss_dssp CTTCCSSCCSSCSTTCCSSSEEEECC
T ss_pred CCCCCCCCCCCCHHHcCCCCEEEEee
Confidence 321100 001 22355677777664
No 476
>3h9e_O Glyceraldehyde-3-phosphate dehydrogenase, testis-; oxidoreductase, structural genomics, structural genomics CON SGC, glycolysis, NAD; HET: NAD; 1.72A {Homo sapiens} PDB: 3pfw_O* 2vyn_D* 2vyv_D*
Probab=36.33 E-value=19 Score=34.04 Aligned_cols=20 Identities=15% Similarity=0.177 Sum_probs=16.3
Q ss_pred CCCcEEEEcCChhhHHHHHHH
Q psy6714 131 NRSDKQIAGTTERGPGALIAS 151 (303)
Q Consensus 131 ~~mkIgIIGlG~MG~~~La~a 151 (303)
.++||||.|.|.||. .+++.
T Consensus 6 ~~~kvgInGFGRIGr-lv~R~ 25 (346)
T 3h9e_O 6 RELTVGINGFGRIGR-LVLRA 25 (346)
T ss_dssp CCCEEEEECCSHHHH-HHHHH
T ss_pred CeeEEEEECCChHHH-HHHHH
Confidence 478999999999999 55543
No 477
>2ep7_A GAPDH, glyceraldehyde-3-phosphate dehydrogenase; oxidoreductase, structural genomics, NPPSFA; HET: NAD; 2.30A {Aquifex aeolicus}
Probab=36.32 E-value=19 Score=33.99 Aligned_cols=19 Identities=16% Similarity=0.190 Sum_probs=15.3
Q ss_pred CCcEEEEcCChhhHHHHHHH
Q psy6714 132 RSDKQIAGTTERGPGALIAS 151 (303)
Q Consensus 132 ~mkIgIIGlG~MG~~~La~a 151 (303)
++||||.|.|.||. .+.+.
T Consensus 2 ~ikV~InGfGrIGr-~v~r~ 20 (342)
T 2ep7_A 2 AIKVGINGFGRIGR-SFFRA 20 (342)
T ss_dssp -CEEEEECCSHHHH-HHHHH
T ss_pred ceEEEEECCCHHHH-HHHHH
Confidence 36999999999999 56654
No 478
>3oh8_A Nucleoside-diphosphate sugar epimerase (SULA FAMI; DUF1731_C, northeast structural genomics consortium, NESG, C PSI-biology; 2.00A {Corynebacterium glutamicum}
Probab=36.25 E-value=8.7 Score=37.27 Aligned_cols=53 Identities=15% Similarity=0.048 Sum_probs=29.8
Q ss_pred CCcEEEEc-CChhhHHHHHHHHhhcHHHH--------hhCCCe--EecChHHhhcCCCEEEEeeC
Q psy6714 132 RSDKQIAG-TTERGPGALIASLNIVSKAT--------GTMGAK--ITFDNKEVTLNSEVIILAVK 185 (303)
Q Consensus 132 ~mkIgIIG-lG~MG~~~La~al~r~~e~l--------~e~Gv~--v~~d~~eav~~ADIVILAVp 185 (303)
+|||.|.| +|.+|. .|+..+....... ....+. ......++++++|+||-+.-
T Consensus 147 ~m~VLVTGatG~IG~-~l~~~L~~~G~~V~~l~R~~~~~~~v~~d~~~~~~~~l~~~D~Vih~A~ 210 (516)
T 3oh8_A 147 PLTVAITGSRGLVGR-ALTAQLQTGGHEVIQLVRKEPKPGKRFWDPLNPASDLLDGADVLVHLAG 210 (516)
T ss_dssp CCEEEEESTTSHHHH-HHHHHHHHTTCEEEEEESSSCCTTCEECCTTSCCTTTTTTCSEEEECCC
T ss_pred CCEEEEECCCCHHHH-HHHHHHHHCCCEEEEEECCCCCccceeecccchhHHhcCCCCEEEECCC
Confidence 78999998 899999 4654432111000 000011 01123456788999998764
No 479
>3grf_A Ornithine carbamoyltransferase; ornithine transcarbamoylase, arginine degradation pathway, giardia lamblia, drug target; 2.00A {Giardia intestinalis}
Probab=36.07 E-value=73 Score=29.69 Aligned_cols=22 Identities=27% Similarity=0.261 Sum_probs=17.7
Q ss_pred CC--CeEecChHHhhcCCCEEEEe
Q psy6714 162 MG--AKITFDNKEVTLNSEVIILA 183 (303)
Q Consensus 162 ~G--v~v~~d~~eav~~ADIVILA 183 (303)
.| +.++.|+.++++++|||..-
T Consensus 218 ~g~~v~~~~d~~eav~~aDvvytd 241 (328)
T 3grf_A 218 TGGSIKIFHDCKKGCEGVDVVYTD 241 (328)
T ss_dssp CCCEEEEESSHHHHHTTCSEEEEC
T ss_pred CCCeEEEEcCHHHHhcCCCEEEec
Confidence 46 45678999999999999863
No 480
>1uuf_A YAHK, zinc-type alcohol dehydrogenase-like protein YAHK; oxidoreductase, zinc binding, oxydoreductase, metal-binding; 1.76A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1
Probab=36.06 E-value=31 Score=31.80 Aligned_cols=65 Identities=18% Similarity=0.147 Sum_probs=35.8
Q ss_pred CCcEEEEcCChhhHHHHHHHHh-------------hcHHHHhhCCCeEe--cChHH----hhcCCCEEEEeeC-CccHHH
Q psy6714 132 RSDKQIAGTTERGPGALIASLN-------------IVSKATGTMGAKIT--FDNKE----VTLNSEVIILAVK-PHIVPV 191 (303)
Q Consensus 132 ~mkIgIIGlG~MG~~~La~al~-------------r~~e~l~e~Gv~v~--~d~~e----av~~ADIVILAVp-P~~v~~ 191 (303)
..+|.|+|.|.+|. +++...+ ...+.++++|+... .+..+ +....|+||-|+. +..+..
T Consensus 195 g~~VlV~GaG~vG~-~aiqlak~~Ga~Vi~~~~~~~~~~~a~~lGa~~vi~~~~~~~~~~~~~g~Dvvid~~g~~~~~~~ 273 (369)
T 1uuf_A 195 GKKVGVVGIGGLGH-MGIKLAHAMGAHVVAFTTSEAKREAAKALGADEVVNSRNADEMAAHLKSFDFILNTVAAPHNLDD 273 (369)
T ss_dssp TCEEEEECCSHHHH-HHHHHHHHTTCEEEEEESSGGGHHHHHHHTCSEEEETTCHHHHHTTTTCEEEEEECCSSCCCHHH
T ss_pred CCEEEEECCCHHHH-HHHHHHHHCCCEEEEEeCCHHHHHHHHHcCCcEEeccccHHHHHHhhcCCCEEEECCCCHHHHHH
Confidence 35799999999998 3332211 11223456676422 11112 2235788888886 345666
Q ss_pred HHHhhc
Q psy6714 192 ALNDIK 197 (303)
Q Consensus 192 VL~eI~ 197 (303)
.++-++
T Consensus 274 ~~~~l~ 279 (369)
T 1uuf_A 274 FTTLLK 279 (369)
T ss_dssp HHTTEE
T ss_pred HHHHhc
Confidence 655444
No 481
>2h6e_A ADH-4, D-arabinose 1-dehydrogenase; rossman fold, medium chain alcohol dehydrogenase, oxidoreduc; 1.80A {Sulfolobus solfataricus}
Probab=35.95 E-value=37 Score=30.73 Aligned_cols=14 Identities=7% Similarity=-0.052 Sum_probs=12.2
Q ss_pred CCcEEEEcCChhhH
Q psy6714 132 RSDKQIAGTTERGP 145 (303)
Q Consensus 132 ~mkIgIIGlG~MG~ 145 (303)
..+|.|+|.|.+|.
T Consensus 171 g~~VlV~GaG~vG~ 184 (344)
T 2h6e_A 171 EPVVIVNGIGGLAV 184 (344)
T ss_dssp SCEEEEECCSHHHH
T ss_pred CCEEEEECCCHHHH
Confidence 45799999999998
No 482
>2tmg_A Protein (glutamate dehydrogenase); metabolic role, mutant, oxidoreductase; 2.90A {Thermotoga maritima} SCOP: c.2.1.7 c.58.1.1 PDB: 1b26_A 1b3b_A
Probab=35.78 E-value=41 Score=32.48 Aligned_cols=61 Identities=16% Similarity=0.293 Sum_probs=31.1
Q ss_pred ChHHhh-cCCCEEEEeeCCccHHHHHHhhccccCCCCEEEEecCCCcHHHHHhhCCCCCceEEEecCc
Q psy6714 169 DNKEVT-LNSEVIILAVKPHIVPVALNDIKPVFNESNLLISVAGGVPIKNMEQALPKNSRIIRAMPNT 235 (303)
Q Consensus 169 d~~eav-~~ADIVILAVpP~~v~~VL~eI~~~L~~g~IVVSiaaGV~ie~L~~~l~~~~~VVr~mPn~ 235 (303)
++.++. .+|||+|-|-....+... -.+.+ .-++|+--+++-....-.+.|.. +-|.++|..
T Consensus 277 ~~~eil~~~~DIliP~A~~n~i~~~---~a~~l-~ak~V~EgAN~p~t~~a~~~l~~--~Gi~~~PD~ 338 (415)
T 2tmg_A 277 TNEELLELDVDILVPAALEGAIHAG---NAERI-KAKAVVEGANGPTTPEADEILSR--RGILVVPDI 338 (415)
T ss_dssp CHHHHTTCSCSEEEECSSTTSBCHH---HHTTC-CCSEEECCSSSCBCHHHHHHHHH--TTCEEECHH
T ss_pred CchhhhcCCCcEEEecCCcCccCcc---cHHHc-CCeEEEeCCCcccCHHHHHHHHH--CCCEEEChH
Confidence 344544 379999999876555321 11223 34677766554433333333321 234566543
No 483
>3hja_A GAPDH, glyceraldehyde-3-phosphate dehydrogenase; niaid, ssgcid, decode, UW, SBRI, LYME disease, non-hodgkin lymphomas, cytoplasm; HET: NAD; 2.20A {Borrelia burgdorferi B31}
Probab=35.37 E-value=20 Score=34.09 Aligned_cols=19 Identities=16% Similarity=0.135 Sum_probs=14.8
Q ss_pred CCcEEEEcCChhhHHHHHHH
Q psy6714 132 RSDKQIAGTTERGPGALIAS 151 (303)
Q Consensus 132 ~mkIgIIGlG~MG~~~La~a 151 (303)
.+||||.|.|.||. .+.+.
T Consensus 21 ~~kVaInGfGrIGr-~vlr~ 39 (356)
T 3hja_A 21 SMKLAINGFGRIGR-NVFKI 39 (356)
T ss_dssp -CEEEEECCSHHHH-HHHHH
T ss_pred CeEEEEECCCHHHH-HHHHH
Confidence 47999999999999 44443
No 484
>1cdo_A Alcohol dehydrogenase; oxidoreductase, oxidoreductase (CH-OH(D)-NAD(A)); HET: NAD; 2.05A {Gadus callarias} SCOP: b.35.1.2 c.2.1.1
Probab=34.80 E-value=73 Score=29.03 Aligned_cols=14 Identities=21% Similarity=0.133 Sum_probs=12.1
Q ss_pred CCcEEEEcCChhhH
Q psy6714 132 RSDKQIAGTTERGP 145 (303)
Q Consensus 132 ~mkIgIIGlG~MG~ 145 (303)
..+|.|+|.|.+|.
T Consensus 193 g~~VlV~GaG~vG~ 206 (374)
T 1cdo_A 193 GSTCAVFGLGAVGL 206 (374)
T ss_dssp TCEEEEECCSHHHH
T ss_pred CCEEEEECCCHHHH
Confidence 35799999999998
No 485
>2fzw_A Alcohol dehydrogenase class III CHI chain; S-nitrosoglutathione reductase, glutathione-dependent formaldehyde dehydrogenase, oxidoreductase; HET: NAD; 1.84A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 PDB: 3qj5_A* 1mc5_A* 2fze_A* 1m6w_A* 1ma0_A* 1mp0_A* 1teh_A* 1m6h_A*
Probab=34.74 E-value=61 Score=29.52 Aligned_cols=14 Identities=21% Similarity=0.045 Sum_probs=12.2
Q ss_pred CCcEEEEcCChhhH
Q psy6714 132 RSDKQIAGTTERGP 145 (303)
Q Consensus 132 ~mkIgIIGlG~MG~ 145 (303)
..+|.|+|.|.+|.
T Consensus 191 g~~VlV~GaG~vG~ 204 (373)
T 2fzw_A 191 GSVCAVFGLGGVGL 204 (373)
T ss_dssp TCEEEEECCSHHHH
T ss_pred CCEEEEECCCHHHH
Confidence 35799999999998
No 486
>2rir_A Dipicolinate synthase, A chain; structural genomics, APC1343, PSI-2, structure initiative; HET: MSE NAP; 2.79A {Bacillus subtilis}
Probab=34.72 E-value=18 Score=32.52 Aligned_cols=52 Identities=19% Similarity=0.132 Sum_probs=27.0
Q ss_pred CCCcEEEEcCChhhHHHHHHHHhhcH-H---------HHhhCCCeEecChHHhhcCCCEEEEe
Q psy6714 131 NRSDKQIAGTTERGPGALIASLNIVS-K---------ATGTMGAKITFDNKEVTLNSEVIILA 183 (303)
Q Consensus 131 ~~mkIgIIGlG~MG~~~La~al~r~~-e---------~l~e~Gv~v~~d~~eav~~ADIVILA 183 (303)
..|||.|+|....... +...+.... + .+.+.|.....+..+.++++|+||..
T Consensus 6 ~~mki~v~~~~~~~~~-~~~~L~~~g~~v~~~~~~~~~~~~~g~~~~~~~~~~~~~~d~ii~~ 67 (300)
T 2rir_A 6 TGLKIAVIGGDARQLE-IIRKLTEQQADIYLVGFDQLDHGFTGAVKCNIDEIPFQQIDSIILP 67 (300)
T ss_dssp CSCEEEEESBCHHHHH-HHHHHHHTTCEEEEESCTTSSCCCTTEEECCGGGSCGGGCSEEECC
T ss_pred cCCEEEEECCCHHHHH-HHHHHHhCCCEEEEEeccccccccccceeccchHHHHhcCCEEEec
Confidence 3589999998765542 222221100 0 00112333333345667899999873
No 487
>1ka9_H Imidazole glycerol phosphtate synthase; riken structural genomics/proteomics initiative, RSGI, structural genomics, transferase; 2.30A {Thermus thermophilus} SCOP: c.23.16.1
Probab=34.24 E-value=37 Score=28.38 Aligned_cols=45 Identities=11% Similarity=0.150 Sum_probs=25.7
Q ss_pred CCCcEEEEcCC--hhhHHHHHHHHhhcHHHHhhCCCeEe-cChHHhhcCCCEEEEee
Q psy6714 131 NRSDKQIAGTT--ERGPGALIASLNIVSKATGTMGAKIT-FDNKEVTLNSEVIILAV 184 (303)
Q Consensus 131 ~~mkIgIIGlG--~MG~~~La~al~r~~e~l~e~Gv~v~-~d~~eav~~ADIVILAV 184 (303)
|+|||+||-.| +.+. + .+.+++.|+.+. .++.+.+.++|.|||+=
T Consensus 1 M~~~I~iid~~~~~~~~--~-------~~~l~~~G~~~~~~~~~~~l~~~d~lil~G 48 (200)
T 1ka9_H 1 MRMKALLIDYGSGNLRS--A-------AKALEAAGFSVAVAQDPKAHEEADLLVLPG 48 (200)
T ss_dssp --CEEEEECSSCSCHHH--H-------HHHHHHTTCEEEEESSTTSCSSCSEEEECC
T ss_pred CccEEEEEeCCCccHHH--H-------HHHHHHCCCeEEEecChHHcccCCEEEECC
Confidence 35789999665 4333 2 234556676432 22233467899999944
No 488
>1vl8_A Gluconate 5-dehydrogenase; TM0441, structural genomics, JCSG structure initiative, PSI, joint center for structural GENO oxidoreductase; HET: NAP; 2.07A {Thermotoga maritima} SCOP: c.2.1.2
Probab=33.96 E-value=81 Score=27.26 Aligned_cols=85 Identities=13% Similarity=0.160 Sum_probs=37.4
Q ss_pred CCCCCCCcccccCCCcEEEEc-CChhhHHHHHHHHhhcHHHHhhCCCeEe--c-Ch---HHhh------cCCCEEEEeeC
Q psy6714 119 APTTPSSREARWNRSDKQIAG-TTERGPGALIASLNIVSKATGTMGAKIT--F-DN---KEVT------LNSEVIILAVK 185 (303)
Q Consensus 119 ~~~~~~~~~~~~~~mkIgIIG-lG~MG~~~La~al~r~~e~l~e~Gv~v~--~-d~---~eav------~~ADIVILAVp 185 (303)
.|-.+..+...+..+++-|.| .|.||. .++.. +.+.|..+. . +. .++. ...++.++.+.
T Consensus 8 ~~~~~~~~~~~l~~k~~lVTGas~gIG~-~ia~~-------l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D 79 (267)
T 1vl8_A 8 HHHHHMKEVFDLRGRVALVTGGSRGLGF-GIAQG-------LAEAGCSVVVASRNLEEASEAAQKLTEKYGVETMAFRCD 79 (267)
T ss_dssp ---------CCCTTCEEEEETTTSHHHH-HHHHH-------HHHTTCEEEEEESCHHHHHHHHHHHHHHHCCCEEEEECC
T ss_pred CCCCCCCCCcCCCCCEEEEECCCCHHHH-HHHHH-------HHHCCCEEEEEeCCHHHHHHHHHHHHHhcCCeEEEEEcC
Confidence 344444555445556677776 788898 35433 333454331 1 11 1111 13455555553
Q ss_pred ---CccHHHHHHhhccccCCCCEEEEecC
Q psy6714 186 ---PHIVPVALNDIKPVFNESNLLISVAG 211 (303)
Q Consensus 186 ---P~~v~~VL~eI~~~L~~g~IVVSiaa 211 (303)
+..+..+++++...+..=.+||..++
T Consensus 80 l~~~~~v~~~~~~~~~~~g~iD~lvnnAg 108 (267)
T 1vl8_A 80 VSNYEEVKKLLEAVKEKFGKLDTVVNAAG 108 (267)
T ss_dssp TTCHHHHHHHHHHHHHHHSCCCEEEECCC
T ss_pred CCCHHHHHHHHHHHHHHcCCCCEEEECCC
Confidence 44555666665443333246675543
No 489
>1l3i_A Precorrin-6Y methyltransferase/putative decarboxylase; structural genomics, beta barrel, rossmann fold, tetramer; HET: SAH; 1.95A {Methanothermobacterthermautotrophicus} SCOP: c.66.1.22 PDB: 1kxz_A 1l3b_A 1f38_A 1l3c_A*
Probab=33.53 E-value=95 Score=24.28 Aligned_cols=36 Identities=8% Similarity=0.153 Sum_probs=25.5
Q ss_pred cCCCEEEEeeCCccHHHHHHhhccccCCC-CEEEEec
Q psy6714 175 LNSEVIILAVKPHIVPVALNDIKPVFNES-NLLISVA 210 (303)
Q Consensus 175 ~~ADIVILAVpP~~v~~VL~eI~~~L~~g-~IVVSia 210 (303)
...|+||+.-....+..++..+...++++ .++++..
T Consensus 99 ~~~D~v~~~~~~~~~~~~l~~~~~~l~~gG~l~~~~~ 135 (192)
T 1l3i_A 99 PDIDIAVVGGSGGELQEILRIIKDKLKPGGRIIVTAI 135 (192)
T ss_dssp CCEEEEEESCCTTCHHHHHHHHHHTEEEEEEEEEEEC
T ss_pred CCCCEEEECCchHHHHHHHHHHHHhcCCCcEEEEEec
Confidence 35799988766577888888887777655 4555443
No 490
>3qj4_A Renalase; FAD/NAD(P)-binding rossmann fold superfamily, flavin contain oxidoreductase, monoamine oxidase, NAD, extracellular, oxidoreductase; HET: FAD; 2.50A {Homo sapiens}
Probab=33.08 E-value=21 Score=31.85 Aligned_cols=20 Identities=25% Similarity=0.215 Sum_probs=15.8
Q ss_pred CCcEEEEcCChhhHHHHHHHH
Q psy6714 132 RSDKQIAGTTERGPGALIASL 152 (303)
Q Consensus 132 ~mkIgIIGlG~MG~~~La~al 152 (303)
|++|.|||.|..|. +++..+
T Consensus 1 m~dV~IIGaG~aGl-~~A~~L 20 (342)
T 3qj4_A 1 MAQVLIVGAGMTGS-LCAALL 20 (342)
T ss_dssp CEEEEEECCSHHHH-HHHHHH
T ss_pred CCcEEEECCcHHHH-HHHHHH
Confidence 45799999999998 566554
No 491
>3grz_A L11 mtase, ribosomal protein L11 methyltransferase; methylase, SAM-binding domain, PSI-2, nysgxrc; 2.00A {Lactobacillus delbrueckii subsp}
Probab=32.94 E-value=28 Score=28.53 Aligned_cols=48 Identities=19% Similarity=0.276 Sum_probs=33.0
Q ss_pred cCCCEEEEeeCCccHHHHHHhhccccCCC-CEEEEecCCCcHHHHHhhC
Q psy6714 175 LNSEVIILAVKPHIVPVALNDIKPVFNES-NLLISVAGGVPIKNMEQAL 222 (303)
Q Consensus 175 ~~ADIVILAVpP~~v~~VL~eI~~~L~~g-~IVVSiaaGV~ie~L~~~l 222 (303)
...|+|+...+...+..+++++...++++ .++++....-..+.+...+
T Consensus 124 ~~fD~i~~~~~~~~~~~~l~~~~~~L~~gG~l~~~~~~~~~~~~~~~~~ 172 (205)
T 3grz_A 124 GKFDLIVANILAEILLDLIPQLDSHLNEDGQVIFSGIDYLQLPKIEQAL 172 (205)
T ss_dssp SCEEEEEEESCHHHHHHHGGGSGGGEEEEEEEEEEEEEGGGHHHHHHHH
T ss_pred CCceEEEECCcHHHHHHHHHHHHHhcCCCCEEEEEecCcccHHHHHHHH
Confidence 56899988877777888888888777654 5566544444555565554
No 492
>1yvv_A Amine oxidase, flavin-containing; oxidoreductase, PSR10, Q888A4, X-RAY, structure, PSI, protein structure initiative; HET: FAD; 2.50A {Pseudomonas syringae} PDB: 3kkj_A*
Probab=32.92 E-value=27 Score=30.68 Aligned_cols=20 Identities=25% Similarity=0.202 Sum_probs=15.8
Q ss_pred CCcEEEEcCChhhHHHHHHHH
Q psy6714 132 RSDKQIAGTTERGPGALIASL 152 (303)
Q Consensus 132 ~mkIgIIGlG~MG~~~La~al 152 (303)
+++|.|||.|..|. +++..+
T Consensus 2 ~~dV~IIGaG~~Gl-~~A~~L 21 (336)
T 1yvv_A 2 TVPIAIIGTGIAGL-SAAQAL 21 (336)
T ss_dssp CCCEEEECCSHHHH-HHHHHH
T ss_pred CceEEEECCcHHHH-HHHHHH
Confidence 45799999999998 566543
No 493
>2gpy_A O-methyltransferase; structural genomics, PSI, protein structure initiative, NEW research center for structural genomics, nysgxrc; HET: MSE; 1.90A {Bacillus halodurans}
Probab=32.89 E-value=75 Score=26.54 Aligned_cols=34 Identities=9% Similarity=0.065 Sum_probs=25.5
Q ss_pred cCCCEEEEeeCCccHHHHHHhhccccCCC-CEEEE
Q psy6714 175 LNSEVIILAVKPHIVPVALNDIKPVFNES-NLLIS 208 (303)
Q Consensus 175 ~~ADIVILAVpP~~v~~VL~eI~~~L~~g-~IVVS 208 (303)
...|+||+..+......+++.+...++++ .+|++
T Consensus 125 ~~fD~I~~~~~~~~~~~~l~~~~~~L~pgG~lv~~ 159 (233)
T 2gpy_A 125 PLFDVLFIDAAKGQYRRFFDMYSPMVRPGGLILSD 159 (233)
T ss_dssp CCEEEEEEEGGGSCHHHHHHHHGGGEEEEEEEEEE
T ss_pred CCccEEEECCCHHHHHHHHHHHHHHcCCCeEEEEE
Confidence 45799999887777888888887777765 45554
No 494
>4ej6_A Putative zinc-binding dehydrogenase; structural genomics, nysgrc, PSI-biology, NEW YORK structura genomics research consortium; 1.89A {Sinorhizobium meliloti} PDB: 4ejm_A*
Probab=32.76 E-value=33 Score=31.62 Aligned_cols=14 Identities=29% Similarity=0.157 Sum_probs=12.2
Q ss_pred CCcEEEEcCChhhH
Q psy6714 132 RSDKQIAGTTERGP 145 (303)
Q Consensus 132 ~mkIgIIGlG~MG~ 145 (303)
..+|.|+|.|.+|.
T Consensus 183 g~~VlV~GaG~vG~ 196 (370)
T 4ej6_A 183 GSTVAILGGGVIGL 196 (370)
T ss_dssp TCEEEEECCSHHHH
T ss_pred CCEEEEECCCHHHH
Confidence 45799999999998
No 495
>3ip1_A Alcohol dehydrogenase, zinc-containing; structural genomics, metal-binding, oxidoreductase, PSI-2, protein structure initiative; 2.09A {Thermotoga maritima}
Probab=32.43 E-value=75 Score=29.45 Aligned_cols=14 Identities=21% Similarity=0.171 Sum_probs=12.2
Q ss_pred CCcEEEEcCChhhH
Q psy6714 132 RSDKQIAGTTERGP 145 (303)
Q Consensus 132 ~mkIgIIGlG~MG~ 145 (303)
..+|.|+|.|.+|.
T Consensus 214 g~~VlV~GaG~vG~ 227 (404)
T 3ip1_A 214 GDNVVILGGGPIGL 227 (404)
T ss_dssp TCEEEEECCSHHHH
T ss_pred CCEEEEECCCHHHH
Confidence 45799999999998
No 496
>3cmm_A Ubiquitin-activating enzyme E1 1; UBA1, protein turnover, ligase, conformationa thioester, adenylation, transthioesterification, ATP-bindin nucleotide-binding; 2.70A {Saccharomyces cerevisiae}
Probab=32.38 E-value=59 Score=34.96 Aligned_cols=17 Identities=24% Similarity=0.194 Sum_probs=14.5
Q ss_pred cCCCcEEEEcCChhhHH
Q psy6714 130 WNRSDKQIAGTTERGPG 146 (303)
Q Consensus 130 ~~~mkIgIIGlG~MG~~ 146 (303)
+...+|.|||+|.+|..
T Consensus 25 L~~s~VlIvG~GGlGse 41 (1015)
T 3cmm_A 25 MQTSNVLILGLKGLGVE 41 (1015)
T ss_dssp HTTCEEEEECCSHHHHH
T ss_pred HhcCEEEEECCChHHHH
Confidence 45678999999999994
No 497
>3aoe_E Glutamate dehydrogenase; rossmann fold, NADH, oxidoreductase; 2.60A {Thermus thermophilus}
Probab=32.38 E-value=77 Score=30.58 Aligned_cols=55 Identities=18% Similarity=0.152 Sum_probs=29.6
Q ss_pred cCCCEEEEeeCCccHHHHHHhhccccCCCCEEEEecCCCcHHHHHhhCCCCCceEEEecCc
Q psy6714 175 LNSEVIILAVKPHIVPVALNDIKPVFNESNLLISVAGGVPIKNMEQALPKNSRIIRAMPNT 235 (303)
Q Consensus 175 ~~ADIVILAVpP~~v~~VL~eI~~~L~~g~IVVSiaaGV~ie~L~~~l~~~~~VVr~mPn~ 235 (303)
-+|||++-|-....+...- .+.+ .-++|+--+++-....-.+.|.. +-|.++|..
T Consensus 288 ~~~DVliP~A~~n~i~~~~---A~~l-~ak~V~EgAN~p~t~~A~~~L~~--~Gi~~~PD~ 342 (419)
T 3aoe_E 288 LEAEVLVLAAREGALDGDR---ARQV-QAQAVVEVANFGLNPEAEAYLLG--KGALVVPDL 342 (419)
T ss_dssp SSCSEEEECSCTTCBCHHH---HTTC-CCSEEEECSTTCBCHHHHHHHHH--HTCEEECHH
T ss_pred cCceEEEecccccccccch---HhhC-CceEEEECCCCcCCHHHHHHHHH--CCCEEECHH
Confidence 3799999998766554322 2223 33577766654443333333421 335566654
No 498
>3s2e_A Zinc-containing alcohol dehydrogenase superfamily; FURX, oxidoreductase; HET: NAD; 1.76A {Ralstonia eutropha} PDB: 3s1l_A* 3s2f_A* 3s2g_A* 3s2i_A* 1llu_A* 3meq_A*
Probab=32.32 E-value=48 Score=29.80 Aligned_cols=14 Identities=21% Similarity=0.081 Sum_probs=12.1
Q ss_pred CCcEEEEcCChhhH
Q psy6714 132 RSDKQIAGTTERGP 145 (303)
Q Consensus 132 ~mkIgIIGlG~MG~ 145 (303)
..+|.|+|.|.+|.
T Consensus 167 g~~VlV~GaG~vG~ 180 (340)
T 3s2e_A 167 GQWVVISGIGGLGH 180 (340)
T ss_dssp TSEEEEECCSTTHH
T ss_pred CCEEEEECCCHHHH
Confidence 35799999999998
No 499
>1obf_O Glyceraldehyde 3-phosphate dehydrogenase; glycolytic pathway, oxidoreductase, free-NAD GAPDH; HET: PG4; 1.7A {Achromobacter xylosoxidans} SCOP: c.2.1.3 d.81.1.1 PDB: 3gnq_A*
Probab=32.14 E-value=22 Score=33.38 Aligned_cols=19 Identities=16% Similarity=0.223 Sum_probs=15.4
Q ss_pred CCcEEEEcCChhhHHHHHHH
Q psy6714 132 RSDKQIAGTTERGPGALIAS 151 (303)
Q Consensus 132 ~mkIgIIGlG~MG~~~La~a 151 (303)
++||||.|.|.||. .+.+.
T Consensus 1 ~ikVaInGfGrIGr-~v~r~ 19 (335)
T 1obf_O 1 TIRVAINGYGRIGR-NILRA 19 (335)
T ss_dssp CEEEEEECCSHHHH-HHHHH
T ss_pred CcEEEEECCCHHHH-HHHHH
Confidence 36899999999999 55554
No 500
>3slg_A PBGP3 protein; structural genomics, seattle structural genomics center for infectious disease, ssgcid, melioidosis, glanders; 2.10A {Burkholderia pseudomallei}
Probab=32.00 E-value=1.5e+02 Score=26.42 Aligned_cols=21 Identities=19% Similarity=0.077 Sum_probs=15.7
Q ss_pred cCCCcEEEEc-CChhhHHHHHHH
Q psy6714 130 WNRSDKQIAG-TTERGPGALIAS 151 (303)
Q Consensus 130 ~~~mkIgIIG-lG~MG~~~La~a 151 (303)
.+||+|.|.| +|.+|.. |+..
T Consensus 22 m~~~~vlVtGatG~iG~~-l~~~ 43 (372)
T 3slg_A 22 MKAKKVLILGVNGFIGHH-LSKR 43 (372)
T ss_dssp -CCCEEEEESCSSHHHHH-HHHH
T ss_pred cCCCEEEEECCCChHHHH-HHHH
Confidence 3468999998 8999994 5544
Done!