Query psy6719
Match_columns 126
No_of_seqs 112 out of 1022
Neff 6.8
Searched_HMMs 46136
Date Fri Aug 16 16:39:29 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy6719.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/6719hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 cd01383 MYSc_type_VIII Myosin 100.0 9.4E-36 2E-40 257.0 8.1 99 15-113 363-462 (677)
2 COG5022 Myosin heavy chain [Cy 100.0 7.6E-36 1.7E-40 267.1 7.7 104 15-123 426-531 (1463)
3 PTZ00014 myosin-A; Provisional 100.0 8.5E-36 1.8E-40 261.2 7.8 101 15-115 460-561 (821)
4 cd01387 MYSc_type_XV Myosin mo 100.0 7.1E-36 1.5E-40 257.8 7.0 100 16-115 360-460 (677)
5 cd01381 MYSc_type_VII Myosin m 100.0 1.6E-35 3.5E-40 255.4 8.8 100 15-114 360-460 (671)
6 cd01384 MYSc_type_XI Myosin mo 100.0 2E-35 4.3E-40 254.9 8.0 100 15-114 365-465 (674)
7 cd01385 MYSc_type_IX Myosin mo 100.0 1.3E-35 2.8E-40 256.7 6.6 101 15-115 374-476 (692)
8 cd01379 MYSc_type_III Myosin m 100.0 1.6E-35 3.6E-40 254.7 7.0 101 15-115 371-472 (653)
9 cd01382 MYSc_type_VI Myosin mo 100.0 2.7E-35 5.9E-40 255.5 7.8 101 15-115 395-496 (717)
10 cd01378 MYSc_type_I Myosin mot 100.0 3.7E-35 8.1E-40 253.3 8.0 101 15-115 364-467 (674)
11 cd01377 MYSc_type_II Myosin mo 100.0 6.2E-35 1.3E-39 252.6 8.4 100 15-114 372-473 (693)
12 cd01380 MYSc_type_V Myosin mot 100.0 1.6E-34 3.5E-39 249.9 8.2 99 15-114 366-465 (691)
13 smart00242 MYSc Myosin. Large 100.0 6.8E-34 1.5E-38 245.6 7.8 101 15-115 367-468 (677)
14 cd00124 MYSc Myosin motor doma 100.0 2.6E-33 5.6E-38 242.1 7.6 101 15-115 360-461 (679)
15 cd01386 MYSc_type_XVIII Myosin 100.0 1.3E-32 2.9E-37 239.9 8.0 100 16-115 372-493 (767)
16 PF00063 Myosin_head: Myosin h 100.0 8.2E-33 1.8E-37 238.7 4.6 101 15-115 362-464 (689)
17 KOG0161|consensus 100.0 3.4E-32 7.3E-37 250.9 6.3 108 13-125 444-553 (1930)
18 KOG0164|consensus 100.0 4.1E-31 8.8E-36 225.4 5.3 99 16-114 374-474 (1001)
19 KOG0163|consensus 100.0 9.6E-30 2.1E-34 218.1 6.3 101 14-114 448-549 (1259)
20 KOG0160|consensus 99.9 3E-27 6.5E-32 206.5 6.5 97 15-112 366-463 (862)
21 KOG0162|consensus 99.9 2.1E-26 4.6E-31 197.1 5.1 96 16-111 382-483 (1106)
22 KOG4229|consensus 99.9 2.5E-25 5.5E-30 198.1 4.0 100 16-115 426-526 (1062)
23 KOG2655|consensus 37.5 33 0.00072 28.5 2.8 32 20-51 82-115 (366)
24 COG5019 CDC3 Septin family pro 36.3 45 0.00098 27.8 3.4 32 19-50 84-117 (373)
25 cd01850 CDC_Septin CDC/Septin. 36.2 47 0.001 26.0 3.4 32 19-50 65-98 (276)
26 COG5211 SSU72 RNA polymerase I 32.9 16 0.00035 27.2 0.2 30 89-118 80-117 (197)
27 KOG1547|consensus 30.5 75 0.0016 25.6 3.6 48 20-68 107-157 (336)
28 PF00735 Septin: Septin; Inte 25.4 92 0.002 24.6 3.4 32 20-51 66-99 (281)
No 1
>cd01383 MYSc_type_VIII Myosin motor domain, plant-specific type VIII myosins, a subgroup which has been associated with endocytosis, cytokinesis, cell-to-cell coupling and gating at plasmodesmata. This catalytic (head) domain has ATPase activity and belongs to the larger group of P-loop NTPases. Myosins are actin-dependent molecular motors that play important roles in muscle contraction, cell motility, and organelle transport. The head domain is a molecular motor, which utilizes ATP hydrolysis to generate directed movement toward the plus end along actin filaments. A cyclical interaction between myosin and actin provides the driving force. Rates of ATP hydrolysis and consequently the speed of movement along actin filaments vary widely, from about 0.04 micrometer per second for myosin I to 4.5 micrometer per second for myosin II in skeletal muscle. Myosin II moves in discrete steps about 5-10 nm long and generates 1-5 piconewtons of force. Upon ATP binding, the myosin head dissociates f
Probab=100.00 E-value=9.4e-36 Score=257.01 Aligned_cols=99 Identities=46% Similarity=0.822 Sum_probs=95.3
Q ss_pred CCCCeeeeeccCcccc-ccchhHHHhhhhhhHHHHHHHHHhhHhHHHHhhhhCCcceecccCCchhhhHhhhcCCCcccc
Q psy6719 15 SGEGSIPAERYGFYPQ-QSSFEQLCINYANEHLQYYFNQHVFQYEQEEYNKEGIRWRHIEFSDNTLCLQLVEGKPNGLLC 93 (126)
Q Consensus 15 ~~~~i~ILDi~GFE~~-~n~feqlciN~~nE~L~~~~~~~~f~~~~~~y~~EgI~~~~i~~~dn~~~ldLi~~kp~Gll~ 93 (126)
++..|+||||||||+| .|+||||||||||||||++|++++|..++++|.+|||.|..|+|.||++|+|||++||.|||+
T Consensus 363 ~~~~IgiLDI~GFE~f~~NsfEQLcINyaNEkLQ~~f~~~vF~~EqeeY~~EgI~~~~i~f~dN~~~ldLie~kp~Gil~ 442 (677)
T cd01383 363 TGRSISILDIYGFESFDKNSFEQFCINYANERLQQHFNRHLFKLEQEEYEEDGIDWTKVEFEDNQECLDLFEKKPLGLLS 442 (677)
T ss_pred ccceEEEeeccccccCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCcccccCCCcHHHHHHHhcCCccHHH
Confidence 3567899999999999 999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cchhhhcCCCCCCccccccc
Q psy6719 94 VLDDQAKFSSSPFPVFRVSR 113 (126)
Q Consensus 94 lLDee~~~p~~td~sF~~~~ 113 (126)
+|||||++|++||++|++|.
T Consensus 443 lLdee~~~p~~tD~~f~~kl 462 (677)
T cd01383 443 LLDEESTFPNATDLTFANKL 462 (677)
T ss_pred HhHHHHcCCCCCHHHHHHHH
Confidence 99999999999999999653
No 2
>COG5022 Myosin heavy chain [Cytoskeleton]
Probab=100.00 E-value=7.6e-36 Score=267.10 Aligned_cols=104 Identities=44% Similarity=0.760 Sum_probs=97.6
Q ss_pred CCCCeeeeeccCcccc-ccchhHHHhhhhhhHHHHHHHHHhhHhHHHHhhhhCCcceecccCCchhhhHhhhc-CCCccc
Q psy6719 15 SGEGSIPAERYGFYPQ-QSSFEQLCINYANEHLQYYFNQHVFQYEQEEYNKEGIRWRHIEFSDNTLCLQLVEG-KPNGLL 92 (126)
Q Consensus 15 ~~~~i~ILDi~GFE~~-~n~feqlciN~~nE~L~~~~~~~~f~~~~~~y~~EgI~~~~i~~~dn~~~ldLi~~-kp~Gll 92 (126)
.++.||||||||||+| .|||||||||||||+||++|++++|+.+|++|.+|||.|.+|+|.||++|+|||++ .|.|||
T Consensus 426 ~~~fIGVLDIyGFEiFEkNSFEQlCINYtNEKLQQ~Fn~h~FklEQEeY~kE~IeW~~Idy~DnQ~~IDLIE~~~p~GIl 505 (1463)
T COG5022 426 ASNFIGVLDIYGFEIFEKNSFEQLCINYTNEKLQQFFNQHMFKLEQEEYVKEGIEWSFIDYFDNQPCIDLIEKKNPLGIL 505 (1463)
T ss_pred cccceeEEeecchhhhccCcHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHhcCcccccccccCcchhHHHhccCCCchH
Confidence 5678999999999999 99999999999999999999999999999999999999999999999999999996 378999
Q ss_pred ccchhhhcCCCCCCccccccchhhHHHHHhc
Q psy6719 93 CVLDDQAKFSSSPFPVFRVSREVGIFQQALN 123 (126)
Q Consensus 93 ~lLDee~~~p~~td~sF~~~~~~~~~~~~~~ 123 (126)
++|||||.+|.+||++|..| |-+.++
T Consensus 506 slLDEE~~~p~atd~s~~sK-----L~~~l~ 531 (1463)
T COG5022 506 SLLDEECVMPHATDESFTSK-----LAQRLN 531 (1463)
T ss_pred hhhcHHhcCCCCCchHHHHH-----HHHHhc
Confidence 99999999999999999977 555555
No 3
>PTZ00014 myosin-A; Provisional
Probab=100.00 E-value=8.5e-36 Score=261.16 Aligned_cols=101 Identities=31% Similarity=0.362 Sum_probs=96.3
Q ss_pred CCCCeeeeeccCcccc-ccchhHHHhhhhhhHHHHHHHHHhhHhHHHHhhhhCCcceecccCCchhhhHhhhcCCCcccc
Q psy6719 15 SGEGSIPAERYGFYPQ-QSSFEQLCINYANEHLQYYFNQHVFQYEQEEYNKEGIRWRHIEFSDNTLCLQLVEGKPNGLLC 93 (126)
Q Consensus 15 ~~~~i~ILDi~GFE~~-~n~feqlciN~~nE~L~~~~~~~~f~~~~~~y~~EgI~~~~i~~~dn~~~ldLi~~kp~Gll~ 93 (126)
....|+||||||||+| .|||||||||||||+||++|++++|..++++|.+|||.|..++|.||++|+|||++||.|||+
T Consensus 460 ~~~~IGiLDI~GFE~f~~NSfEQLcINy~NEkLQq~F~~~vF~~EqeeY~~EgI~~~~i~f~dN~~~idLie~k~~GIl~ 539 (821)
T PTZ00014 460 FKVFIGMLDIFGFEVFKNNSLEQLFINITNEMLQKNFVDIVFERESKLYKDEGISTEELEYTSNESVIDLLCGKGKSVLS 539 (821)
T ss_pred cCceEEEEecccccccCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccCCCCCCCCcHHHHHHHhcCCccHHH
Confidence 3457899999999999 999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cchhhhcCCCCCCccccccchh
Q psy6719 94 VLDDQAKFSSSPFPVFRVSREV 115 (126)
Q Consensus 94 lLDee~~~p~~td~sF~~~~~~ 115 (126)
+|||||++|++||++|++|.+.
T Consensus 540 lLDEec~~p~~tD~~f~~kl~~ 561 (821)
T PTZ00014 540 ILEDQCLAPGGTDEKFVSSCNT 561 (821)
T ss_pred HHHHHhCCCCCCHHHHHHHHHH
Confidence 9999999999999999976554
No 4
>cd01387 MYSc_type_XV Myosin motor domain, type XV myosins. In vertebrates, myosin XV appears to be expressed in sensory tissue and play a role in hearing. This catalytic (head) domain has ATPase activity and belongs to the larger group of P-loop NTPases. Myosins are actin-dependent molecular motors that play important roles in muscle contraction, cell motility, and organelle transport. The head domain is a molecular motor, which utilizes ATP hydrolysis to generate directed movement toward the plus end along actin filaments. A cyclical interaction between myosin and actin provides the driving force. Rates of ATP hydrolysis and consequently the speed of movement along actin filaments vary widely, from about 0.04 micrometer per second for myosin I to 4.5 micrometer per second for myosin II in skeletal muscle. Myosin II moves in discrete steps about 5-10 nm long and generates 1-5 piconewtons of force. Upon ATP binding, the myosin head dissociates from an actin filament. ATP hydrolysis caus
Probab=100.00 E-value=7.1e-36 Score=257.81 Aligned_cols=100 Identities=45% Similarity=0.681 Sum_probs=96.2
Q ss_pred CCCeeeeeccCcccc-ccchhHHHhhhhhhHHHHHHHHHhhHhHHHHhhhhCCcceecccCCchhhhHhhhcCCCccccc
Q psy6719 16 GEGSIPAERYGFYPQ-QSSFEQLCINYANEHLQYYFNQHVFQYEQEEYNKEGIRWRHIEFSDNTLCLQLVEGKPNGLLCV 94 (126)
Q Consensus 16 ~~~i~ILDi~GFE~~-~n~feqlciN~~nE~L~~~~~~~~f~~~~~~y~~EgI~~~~i~~~dn~~~ldLi~~kp~Gll~l 94 (126)
...|+||||||||+| .|+||||||||||||||++|++++|..++++|.+|||.|..++|.||++|+|||++||.|||++
T Consensus 360 ~~~IgILDIfGFE~f~~NsfEQLcINyaNEkLQ~~f~~~vF~~eq~eY~~EgI~~~~i~f~dN~~~ldLi~~kp~Gil~l 439 (677)
T cd01387 360 TLSIAILDIYGFEDLSFNSFEQLCINYANENLQYLFNKIVFQEEQEEYIREQLDWTEIAFADNQPVINLISLKPYGILRI 439 (677)
T ss_pred CceEEEEecCccccCCCCCHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCcccCcCChHHHHHHHhcCCCchHHH
Confidence 456899999999999 9999999999999999999999999999999999999999999999999999999999999999
Q ss_pred chhhhcCCCCCCccccccchh
Q psy6719 95 LDDQAKFSSSPFPVFRVSREV 115 (126)
Q Consensus 95 LDee~~~p~~td~sF~~~~~~ 115 (126)
|||||++|++||++|++|+..
T Consensus 440 Ldee~~~p~~td~~~~~kl~~ 460 (677)
T cd01387 440 LDDQCCFPQATDHTFLQKCHY 460 (677)
T ss_pred HHHHhcCCCCchHHHHHHHHH
Confidence 999999999999999977654
No 5
>cd01381 MYSc_type_VII Myosin motor domain, type VII myosins. Myosins in this group have been associated with functions in sensory systems such as vision and hearing. This catalytic (head) domain has ATPase activity and belongs to the larger group of P-loop NTPases. Myosins are actin-dependent molecular motors that play important roles in muscle contraction, cell motility, and organelle transport. The head domain is a molecular motor, which utilizes ATP hydrolysis to generate directed movement toward the plus end along actin filaments. A cyclical interaction between myosin and actin provides the driving force. Rates of ATP hydrolysis and consequently the speed of movement along actin filaments vary widely, from about 0.04 micrometer per second for myosin I to 4.5 micrometer per second for myosin II in skeletal muscle. Myosin II moves in discrete steps about 5-10 nm long and generates 1-5 piconewtons of force. Upon ATP binding, the myosin head dissociates from an actin filament. ATP hydr
Probab=100.00 E-value=1.6e-35 Score=255.40 Aligned_cols=100 Identities=42% Similarity=0.680 Sum_probs=95.7
Q ss_pred CCCCeeeeeccCcccc-ccchhHHHhhhhhhHHHHHHHHHhhHhHHHHhhhhCCcceecccCCchhhhHhhhcCCCcccc
Q psy6719 15 SGEGSIPAERYGFYPQ-QSSFEQLCINYANEHLQYYFNQHVFQYEQEEYNKEGIRWRHIEFSDNTLCLQLVEGKPNGLLC 93 (126)
Q Consensus 15 ~~~~i~ILDi~GFE~~-~n~feqlciN~~nE~L~~~~~~~~f~~~~~~y~~EgI~~~~i~~~dn~~~ldLi~~kp~Gll~ 93 (126)
+...|+||||||||+| .|+||||||||||||||++|++++|..++++|.+|||.|..++|.||++|+|||++||.|||+
T Consensus 360 ~~~~IgiLDIfGFE~f~~NsfEQLcINy~NEkLQ~~f~~~vf~~eq~eY~~EgI~~~~i~f~dN~~~ldLie~kp~Gil~ 439 (671)
T cd01381 360 SRNSIGVLDIFGFENFDVNSFEQLCINFANENLQQFFVQHIFKLEQEEYNLEHINWQHIEFVDNQDALDLIAIKPLNIMS 439 (671)
T ss_pred ccceEEEEecCCcccCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCCccCccCcHHHHHHHhcCCCCcce
Confidence 4567899999999999 999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cchhhhcCCCCCCccccccch
Q psy6719 94 VLDDQAKFSSSPFPVFRVSRE 114 (126)
Q Consensus 94 lLDee~~~p~~td~sF~~~~~ 114 (126)
+|||||++|++||++|++|.+
T Consensus 440 lLDee~~~p~~td~~f~~kl~ 460 (671)
T cd01381 440 LIDEESKFPKGTDQTMLEKLH 460 (671)
T ss_pred echHhhcCCCCCHHHHHHHHH
Confidence 999999999999999995543
No 6
>cd01384 MYSc_type_XI Myosin motor domain, plant-specific type XI myosin, involved in organelle transport. This catalytic (head) domain has ATPase activity and belongs to the larger group of P-loop NTPases. Myosins are actin-dependent molecular motors that play important roles in muscle contraction, cell motility, and organelle transport. The head domain is a molecular motor, which utilizes ATP hydrolysis to generate directed movement toward the plus end along actin filaments. A cyclical interaction between myosin and actin provides the driving force. Rates of ATP hydrolysis and consequently the speed of movement along actin filaments vary widely, from about 0.04 micrometer per second for myosin I to 4.5 micrometer per second for myosin II in skeletal muscle. Myosin II moves in discrete steps about 5-10 nm long and generates 1-5 piconewtons of force. Upon ATP binding, the myosin head dissociates from an actin filament. ATP hydrolysis causes the head to pivot and associate with a new act
Probab=100.00 E-value=2e-35 Score=254.93 Aligned_cols=100 Identities=46% Similarity=0.686 Sum_probs=95.5
Q ss_pred CCCCeeeeeccCcccc-ccchhHHHhhhhhhHHHHHHHHHhhHhHHHHhhhhCCcceecccCCchhhhHhhhcCCCcccc
Q psy6719 15 SGEGSIPAERYGFYPQ-QSSFEQLCINYANEHLQYYFNQHVFQYEQEEYNKEGIRWRHIEFSDNTLCLQLVEGKPNGLLC 93 (126)
Q Consensus 15 ~~~~i~ILDi~GFE~~-~n~feqlciN~~nE~L~~~~~~~~f~~~~~~y~~EgI~~~~i~~~dn~~~ldLi~~kp~Gll~ 93 (126)
+...|+||||||||+| .|+|||||||||||+||++|++++|..++++|.+|||.|..++|.||++|+|||+++|.|||+
T Consensus 365 ~~~~IgiLDI~GFE~f~~NsfEQLcINyaNEkLQ~~f~~~if~~eq~eY~~EgI~~~~i~~~DN~~~ldLie~~~~Gil~ 444 (674)
T cd01384 365 SKSLIGVLDIYGFESFKTNSFEQFCINLTNEKLQQHFNQHVFKMEQEEYTKEEIDWSYIEFVDNQDVLDLIEKKPGGIIA 444 (674)
T ss_pred CCeEEEEEecccccccCcCCHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHhcCCCCCcccCCChHHHHHHHhcCCccHHH
Confidence 4467899999999999 999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cchhhhcCCCCCCccccccch
Q psy6719 94 VLDDQAKFSSSPFPVFRVSRE 114 (126)
Q Consensus 94 lLDee~~~p~~td~sF~~~~~ 114 (126)
+|||||++|++||++|++|..
T Consensus 445 lLdee~~~p~~td~~f~~kl~ 465 (674)
T cd01384 445 LLDEACMFPKSTHETFAQKLY 465 (674)
T ss_pred HHHHHHcCCCCCHHHHHHHHH
Confidence 999999999999999995543
No 7
>cd01385 MYSc_type_IX Myosin motor domain, type IX myosins. Myosin IX is a processive single-headed motor, which might play a role in signalling. This catalytic (head) domain has ATPase activity and belongs to the larger group of P-loop NTPases. Myosins are actin-dependent molecular motors that play important roles in muscle contraction, cell motility, and organelle transport. The head domain is a molecular motor, which utilizes ATP hydrolysis to generate directed movement toward the plus end along actin filaments. A cyclical interaction between myosin and actin provides the driving force. Rates of ATP hydrolysis and consequently the speed of movement along actin filaments vary widely, from about 0.04 micrometer per second for myosin I to 4.5 micrometer per second for myosin II in skeletal muscle. Myosin II moves in discrete steps about 5-10 nm long and generates 1-5 piconewtons of force. Upon ATP binding, the myosin head dissociates from an actin filament. ATP hydrolysis causes the hea
Probab=100.00 E-value=1.3e-35 Score=256.69 Aligned_cols=101 Identities=49% Similarity=0.844 Sum_probs=96.6
Q ss_pred CCCCeeeeeccCcccc-c-cchhHHHhhhhhhHHHHHHHHHhhHhHHHHhhhhCCcceecccCCchhhhHhhhcCCCccc
Q psy6719 15 SGEGSIPAERYGFYPQ-Q-SSFEQLCINYANEHLQYYFNQHVFQYEQEEYNKEGIRWRHIEFSDNTLCLQLVEGKPNGLL 92 (126)
Q Consensus 15 ~~~~i~ILDi~GFE~~-~-n~feqlciN~~nE~L~~~~~~~~f~~~~~~y~~EgI~~~~i~~~dn~~~ldLi~~kp~Gll 92 (126)
+...|+||||||||+| . |+||||||||||||||++|++++|..++++|.+|||.|..|+|.||++|||||++||.|||
T Consensus 374 ~~~~IgiLDI~GFE~f~~~NsfEQLcINyaNEkLQ~~f~~~vf~~eq~~Y~~EgI~~~~i~f~dN~~~ldLie~k~~Gil 453 (692)
T cd01385 374 SGLSIGVLDIFGFEDFGRCNSFEQLCINYANEQLQYYFNQHIFKLEQEEYQGEGITWTNIEYTDNVGCIQLFSKKPTGLL 453 (692)
T ss_pred cceEEEEEecCccccCCCCCCHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHhcCCCcccccCCCcHHHHHHHhcCCccHH
Confidence 4567899999999999 7 9999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccchhhhcCCCCCCccccccchh
Q psy6719 93 CVLDDQAKFSSSPFPVFRVSREV 115 (126)
Q Consensus 93 ~lLDee~~~p~~td~sF~~~~~~ 115 (126)
++|||||++|++||++|+.|++.
T Consensus 454 ~lLdee~~~p~~td~~~l~kl~~ 476 (692)
T cd01385 454 YLLDEESNFPHATSQTLLAKFNQ 476 (692)
T ss_pred HHhHHHhcCCCCCHHHHHHHHHH
Confidence 99999999999999999977655
No 8
>cd01379 MYSc_type_III Myosin motor domain, type III myosins. Myosin III has been shown to play a role in the vision process in insects and in hearing in mammals. Myosin III, an unconventional myosin, does not form dimers. This catalytic (head) domain has ATPase activity and belongs to the larger group of P-loop NTPases. Myosins are actin-dependent molecular motors that play important roles in muscle contraction, cell motility, and organelle transport. The head domain is a molecular motor, which utilizes ATP hydrolysis to generate directed movement toward the plus end along actin filaments. A cyclical interaction between myosin and actin provides the driving force. Rates of ATP hydrolysis and consequently the speed of movement along actin filaments vary widely, from about 0.04 micrometer per second for myosin I to 4.5 micrometer per second for myosin II in skeletal muscle. Myosin II moves in discrete steps about 5-10 nm long and generates 1-5 piconewtons of force. Upon ATP binding, the
Probab=100.00 E-value=1.6e-35 Score=254.71 Aligned_cols=101 Identities=41% Similarity=0.654 Sum_probs=96.3
Q ss_pred CCCCeeeeeccCcccc-ccchhHHHhhhhhhHHHHHHHHHhhHhHHHHhhhhCCcceecccCCchhhhHhhhcCCCcccc
Q psy6719 15 SGEGSIPAERYGFYPQ-QSSFEQLCINYANEHLQYYFNQHVFQYEQEEYNKEGIRWRHIEFSDNTLCLQLVEGKPNGLLC 93 (126)
Q Consensus 15 ~~~~i~ILDi~GFE~~-~n~feqlciN~~nE~L~~~~~~~~f~~~~~~y~~EgI~~~~i~~~dn~~~ldLi~~kp~Gll~ 93 (126)
....|+||||||||+| .|+||||||||||||||++|++++|..++++|.+|||+|..++|.||++|+|||++||.|||+
T Consensus 371 ~~~~IgiLDI~GFE~f~~NsfEQLcINyaNEkLQ~~f~~~vf~~Eq~eY~~EgI~~~~i~~~dN~~~ldli~~kp~Gil~ 450 (653)
T cd01379 371 DQLNVGILDIFGFENFKKNSFEQLCINIANEQIQYYFNQHIFAWEQQEYLNEGVDARLVEYEDNRPLLDMFLQKPLGLLA 450 (653)
T ss_pred ccceEEEEeccccccCCCCCHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCCCCCcHHHHHhHccCCCcHHH
Confidence 3456899999999999 999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cchhhhcCCCCCCccccccchh
Q psy6719 94 VLDDQAKFSSSPFPVFRVSREV 115 (126)
Q Consensus 94 lLDee~~~p~~td~sF~~~~~~ 115 (126)
+|||||++|++||++|++|.+.
T Consensus 451 lLdee~~~~~~td~~~~~kl~~ 472 (653)
T cd01379 451 LLDEESRFPQATDQTLVEKFED 472 (653)
T ss_pred HHHHHhcCCCCCHHHHHHHHHH
Confidence 9999999999999999977544
No 9
>cd01382 MYSc_type_VI Myosin motor domain, type VI myosins. Myosin VI is a monomeric myosin, which moves towards the minus-end of actin filaments, in contrast to most other myosins. It has been implicated in endocytosis, secretion, and cell migration. This catalytic (head) domain has ATPase activity and belongs to the larger group of P-loop NTPases. Myosins are actin-dependent molecular motors that play important roles in muscle contraction, cell motility, and organelle transport. The head domain is a molecular motor, which utilizes ATP hydrolysis to generate directed movement toward the minus end along actin filaments. A cyclical interaction between myosin and actin provides the driving force. Rates of ATP hydrolysis and consequently the speed of movement along actin filaments vary widely, from about 0.04 micrometer per second for myosin I to 4.5 micrometer per second for myosin II in skeletal muscle. Myosin II moves in discrete steps about 5-10 nm long and generates 1-5 piconewtons of
Probab=100.00 E-value=2.7e-35 Score=255.50 Aligned_cols=101 Identities=35% Similarity=0.573 Sum_probs=96.1
Q ss_pred CCCCeeeeeccCcccc-ccchhHHHhhhhhhHHHHHHHHHhhHhHHHHhhhhCCcceecccCCchhhhHhhhcCCCcccc
Q psy6719 15 SGEGSIPAERYGFYPQ-QSSFEQLCINYANEHLQYYFNQHVFQYEQEEYNKEGIRWRHIEFSDNTLCLQLVEGKPNGLLC 93 (126)
Q Consensus 15 ~~~~i~ILDi~GFE~~-~n~feqlciN~~nE~L~~~~~~~~f~~~~~~y~~EgI~~~~i~~~dn~~~ldLi~~kp~Gll~ 93 (126)
+...|+||||||||+| .|+||||||||||||||++|++++|..++++|.+|||+|..++|.||++|+|||++||.|||+
T Consensus 395 ~~~~IgiLDIfGFE~f~~NsfEQLcINyaNEkLQ~~f~~~if~~Eq~~Y~~EgI~~~~i~~~DN~~~ldLie~k~~Gil~ 474 (717)
T cd01382 395 SSNFIGVLDIAGFEYFEHNSFEQFCINYCNEKLQQFFNERILKEEQELYQREGLGVNEVHYVDNQDCIDLIEAKLNGILD 474 (717)
T ss_pred CCcEEEEEeccccccCCCCCHHHHhhhhhHHHHHHHHHHHHHHHHHHHHHhcCCCCccccccccHHHHHHHhcCCccHHH
Confidence 4567899999999999 999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cchhhhcCCCCCCccccccchh
Q psy6719 94 VLDDQAKFSSSPFPVFRVSREV 115 (126)
Q Consensus 94 lLDee~~~p~~td~sF~~~~~~ 115 (126)
+|||||++|++||++|++|.+.
T Consensus 475 lLDee~~~p~~tD~~f~~kl~~ 496 (717)
T cd01382 475 ILDEENRLPQPSDQHFTSVVHQ 496 (717)
T ss_pred HhHHHhcCCCCCHHHHHHHHHH
Confidence 9999999999999999966443
No 10
>cd01378 MYSc_type_I Myosin motor domain, type I myosins. Myosin I generates movement at the leading edge in cell motility, and class I myosins have been implicated in phagocytosis and vesicle transport. Myosin I, an unconventional myosin, does not form dimers. This catalytic (head) domain has ATPase activity and belongs to the larger group of P-loop NTPases. Myosins are actin-dependent molecular motors that play important roles in muscle contraction, cell motility, and organelle transport. The head domain is a molecular motor, which utilizes ATP hydrolysis to generate directed movement toward the plus end along actin filaments. A cyclical interaction between myosin and actin provides the driving force. Rates of ATP hydrolysis and consequently the speed of movement along actin filaments vary widely, from about 0.04 micrometer per second for myosin I to 4.5 micrometer per second for myosin II in skeletal muscle. Myosin II moves in discrete steps about 5-10 nm long and generates 1-5 picon
Probab=100.00 E-value=3.7e-35 Score=253.29 Aligned_cols=101 Identities=37% Similarity=0.611 Sum_probs=96.0
Q ss_pred CCCCeeeeeccCcccc-ccchhHHHhhhhhhHHHHHHHHHhhHhHHHHhhhhCCcceecccCCchhhhHhhhc-CCCccc
Q psy6719 15 SGEGSIPAERYGFYPQ-QSSFEQLCINYANEHLQYYFNQHVFQYEQEEYNKEGIRWRHIEFSDNTLCLQLVEG-KPNGLL 92 (126)
Q Consensus 15 ~~~~i~ILDi~GFE~~-~n~feqlciN~~nE~L~~~~~~~~f~~~~~~y~~EgI~~~~i~~~dn~~~ldLi~~-kp~Gll 92 (126)
....|+||||||||+| .|+||||||||||||||++|++++|..++++|.+|||.|..++|.||++|+|||++ +|.|||
T Consensus 364 ~~~~IgILDIfGFE~f~~NsfEQLcINyaNEkLQ~~f~~~~F~~eq~~Y~~EgI~~~~i~f~DN~~~ldLie~~~~~Gil 443 (674)
T cd01378 364 KNKVIGVLDIYGFEIFQKNSFEQFCINYVNEKLQQIFIELTLKAEQEEYVREGIKWTPIEYFNNKIVCDLIEGKRPPGIF 443 (674)
T ss_pred CcceEEEEecccccccccccHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCcCcCChHHHHHHHhcCCCcchH
Confidence 4567899999999999 99999999999999999999999999999999999999999999999999999999 899999
Q ss_pred ccchhhhcCC-CCCCccccccchh
Q psy6719 93 CVLDDQAKFS-SSPFPVFRVSREV 115 (126)
Q Consensus 93 ~lLDee~~~p-~~td~sF~~~~~~ 115 (126)
++|||||++| ++||++|++|.+.
T Consensus 444 ~lLdee~~~p~~~tD~~~~~kl~~ 467 (674)
T cd01378 444 SILDDVCATPHEGTDQTFLEKLNK 467 (674)
T ss_pred HHHHHHHcCCCCCChHHHHHHHHH
Confidence 9999999999 9999999966443
No 11
>cd01377 MYSc_type_II Myosin motor domain, type II myosins. Myosin II mediates cortical contraction in cell motility, and is the motor in smooth and skeletal muscle. This catalytic (head) domain has ATPase activity and belongs to the larger group of P-loop NTPases. Myosins are actin-dependent molecular motors that play important roles in muscle contraction, cell motility, and organelle transport. The head domain is a molecular motor, which utilizes ATP hydrolysis to generate directed movement toward the plus end along actin filaments. A cyclical interaction between myosin and actin provides the driving force. Rates of ATP hydrolysis and consequently the speed of movement along actin filaments vary widely, from about 0.04 micrometer per second for myosin I to 4.5 micrometer per second for myosin II in skeletal muscle. Myosin II moves in discrete steps about 5-10 nm long and generates 1-5 piconewtons of force. Upon ATP binding, the myosin head dissociates from an actin filament. ATP hydro
Probab=100.00 E-value=6.2e-35 Score=252.57 Aligned_cols=100 Identities=40% Similarity=0.627 Sum_probs=95.1
Q ss_pred CCCCeeeeeccCcccc-ccchhHHHhhhhhhHHHHHHHHHhhHhHHHHhhhhCCcceeccc-CCchhhhHhhhcCCCccc
Q psy6719 15 SGEGSIPAERYGFYPQ-QSSFEQLCINYANEHLQYYFNQHVFQYEQEEYNKEGIRWRHIEF-SDNTLCLQLVEGKPNGLL 92 (126)
Q Consensus 15 ~~~~i~ILDi~GFE~~-~n~feqlciN~~nE~L~~~~~~~~f~~~~~~y~~EgI~~~~i~~-~dn~~~ldLi~~kp~Gll 92 (126)
+...|+||||||||+| .|+|||||||||||+||++|++++|+.++++|.+|||.|..++| .||++|+|||++||.|||
T Consensus 372 ~~~~IgiLDIfGFE~f~~NsfEQLcINyaNEkLQ~~f~~~vf~~eq~~Y~~EgI~~~~i~~~~dn~~~ldLie~~~~Gil 451 (693)
T cd01377 372 RAYFIGVLDIAGFEIFDFNSFEQLCINYTNEKLQQFFNHHMFVLEQEEYQREGIEWTFIDFGLDLQPTIDLIEKNPMGIL 451 (693)
T ss_pred CCceEEEEecccccccCCCCHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHhCCCCcccccCCCcHHHHHHHhcCCCchH
Confidence 4567899999999999 99999999999999999999999999999999999999999999 599999999999999999
Q ss_pred ccchhhhcCCCCCCccccccch
Q psy6719 93 CVLDDQAKFSSSPFPVFRVSRE 114 (126)
Q Consensus 93 ~lLDee~~~p~~td~sF~~~~~ 114 (126)
++|||||++|++||++|++|..
T Consensus 452 ~lLdee~~~~~~tD~~~~~kl~ 473 (693)
T cd01377 452 SLLDEECVFPKATDKTFVEKLY 473 (693)
T ss_pred hhhhHHhcCCCCCHHHHHHHHH
Confidence 9999999999999999996533
No 12
>cd01380 MYSc_type_V Myosin motor domain, type V myosins. Myosins V transport a variety of intracellular cargo processively along actin filaments, such as membraneous organelles and mRNA. This catalytic (head) domain has ATPase activity and belongs to the larger group of P-loop NTPases. Myosins are actin-dependent molecular motors that play important roles in muscle contraction, cell motility, and organelle transport. The head domain is a molecular motor, which utilizes ATP hydrolysis to generate directed movement toward the plus end along actin filaments. A cyclical interaction between myosin and actin provides the driving force. Rates of ATP hydrolysis and consequently the speed of movement along actin filaments vary widely, from about 0.04 micrometer per second for myosin I to 4.5 micrometer per second for myosin II in skeletal muscle. Myosin II moves in discrete steps about 5-10 nm long and generates 1-5 piconewtons of force. Upon ATP binding, the myosin head dissociates from an act
Probab=100.00 E-value=1.6e-34 Score=249.93 Aligned_cols=99 Identities=43% Similarity=0.706 Sum_probs=93.9
Q ss_pred CCCCeeeeeccCcccc-ccchhHHHhhhhhhHHHHHHHHHhhHhHHHHhhhhCCcceecccCCchhhhHhhhcCCCcccc
Q psy6719 15 SGEGSIPAERYGFYPQ-QSSFEQLCINYANEHLQYYFNQHVFQYEQEEYNKEGIRWRHIEFSDNTLCLQLVEGKPNGLLC 93 (126)
Q Consensus 15 ~~~~i~ILDi~GFE~~-~n~feqlciN~~nE~L~~~~~~~~f~~~~~~y~~EgI~~~~i~~~dn~~~ldLi~~kp~Gll~ 93 (126)
....|+||||||||+| .|+|||||||||||+||++|++++|..++++|.+|||.|..++|.||++|+|||++ |.|||+
T Consensus 366 ~~~~IgiLDI~GFE~f~~NsfEQLcINyaNEkLQ~~f~~~iF~~eq~~Y~~EgI~~~~i~f~DN~~~ldLie~-~~Gil~ 444 (691)
T cd01380 366 QTSFIGVLDIYGFETFEKNSFEQFCINYANEKLQQQFNQHVFKLEQEEYLKEGIEWTFIDFYDNQPCIDLIES-KLGILS 444 (691)
T ss_pred ccceEEEEecCcccccCCCCHHHHhhhhhhHHHHHHHHHHHHHHHHHHHHhcCCCCccccCCCCHHHHHHHhC-CCchHH
Confidence 4567899999999999 99999999999999999999999999999999999999999999999999999996 689999
Q ss_pred cchhhhcCCCCCCccccccch
Q psy6719 94 VLDDQAKFSSSPFPVFRVSRE 114 (126)
Q Consensus 94 lLDee~~~p~~td~sF~~~~~ 114 (126)
+|||||++|++||++|++|.+
T Consensus 445 lLdee~~~p~~td~~f~~kl~ 465 (691)
T cd01380 445 LLDEECRLPKGSDESWAQKLY 465 (691)
T ss_pred HhHHhhcCCCCChHHHHHHHH
Confidence 999999999999999996644
No 13
>smart00242 MYSc Myosin. Large ATPases. ATPase; molecular motor. Muscle contraction consists of a cyclical interaction between myosin and actin. The core of the myosin structure is similar in fold to that of kinesin.
Probab=100.00 E-value=6.8e-34 Score=245.65 Aligned_cols=101 Identities=48% Similarity=0.773 Sum_probs=96.5
Q ss_pred CCCCeeeeeccCcccc-ccchhHHHhhhhhhHHHHHHHHHhhHhHHHHhhhhCCcceecccCCchhhhHhhhcCCCcccc
Q psy6719 15 SGEGSIPAERYGFYPQ-QSSFEQLCINYANEHLQYYFNQHVFQYEQEEYNKEGIRWRHIEFSDNTLCLQLVEGKPNGLLC 93 (126)
Q Consensus 15 ~~~~i~ILDi~GFE~~-~n~feqlciN~~nE~L~~~~~~~~f~~~~~~y~~EgI~~~~i~~~dn~~~ldLi~~kp~Gll~ 93 (126)
....|+||||||||+| .|+||||||||||||||++|++++|..++++|.+|||.|..++|.||++|+|||+++|.|||+
T Consensus 367 ~~~~IgiLDifGFE~f~~NsfEQLcINyaNEkLq~~f~~~~f~~eq~~y~~EgI~~~~i~~~dN~~~l~li~~~~~Gil~ 446 (677)
T smart00242 367 STYFIGVLDIYGFEIFEVNSFEQLCINYANEKLQQFFNQHVFKLEQEEYEREGIDWTFIDFFDNQDCIDLIEKKPPGILS 446 (677)
T ss_pred CceEEEEEecccccccccCCHHHHHhHhhHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCCCCCcHHHHHHHHcCCccHHH
Confidence 4567899999999999 999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cchhhhcCCCCCCccccccchh
Q psy6719 94 VLDDQAKFSSSPFPVFRVSREV 115 (126)
Q Consensus 94 lLDee~~~p~~td~sF~~~~~~ 115 (126)
+|||||++|++||++|++|.+.
T Consensus 447 lLdee~~~~~~td~~~~~kl~~ 468 (677)
T smart00242 447 LLDEECRFPKATDQTFLEKLNQ 468 (677)
T ss_pred HHHHHhcCCCCCHHHHHHHHHH
Confidence 9999999999999999966544
No 14
>cd00124 MYSc Myosin motor domain. This catalytic (head) domain has ATPase activity and belongs to the larger group of P-loop NTPases. Myosins are actin-dependent molecular motors that play important roles in muscle contraction, cell motility, and organelle transport. The head domain is a molecular motor, which utilizes ATP hydrolysis to generate directed movement toward the plus end along actin filaments. A cyclical interaction between myosin and actin provides the driving force. Rates of ATP hydrolysis and consequently the speed of movement along actin filaments vary widely, from about 0.04 micrometer per second for myosin I to 4.5 micrometer per second for myosin II in skeletal muscle. Myosin II moves in discrete steps about 5-10 nm long and generates 1-5 piconewtons of force. Upon ATP binding, the myosin head dissociates from an actin filament. ATP hydrolysis causes the head to pivot and associate with a new actin subunit. The release of Pi causes the head to pivot and move the fila
Probab=99.98 E-value=2.6e-33 Score=242.07 Aligned_cols=101 Identities=46% Similarity=0.731 Sum_probs=96.2
Q ss_pred CCCCeeeeeccCcccc-ccchhHHHhhhhhhHHHHHHHHHhhHhHHHHhhhhCCcceecccCCchhhhHhhhcCCCcccc
Q psy6719 15 SGEGSIPAERYGFYPQ-QSSFEQLCINYANEHLQYYFNQHVFQYEQEEYNKEGIRWRHIEFSDNTLCLQLVEGKPNGLLC 93 (126)
Q Consensus 15 ~~~~i~ILDi~GFE~~-~n~feqlciN~~nE~L~~~~~~~~f~~~~~~y~~EgI~~~~i~~~dn~~~ldLi~~kp~Gll~ 93 (126)
....|+||||||||+| .|+|||||||||||+||++|++++|..++++|.+|||.|..++|.||++|+|||+++|.||++
T Consensus 360 ~~~~IgiLDi~GFE~f~~NsfEQLcINy~NEkLq~~f~~~~f~~eq~~y~~EgI~~~~i~~~dn~~~ldli~~~~~Gi~~ 439 (679)
T cd00124 360 RSLFIGILDIFGFEIFEKNSFEQLCINYANEKLQQFFNQHVFKLEQEEYQEEGIDWESIDFTDNQEVIDLIEKKPGGLLS 439 (679)
T ss_pred CCceeeEEeccccccCCCCCHHHHhcccchHHHHHHHHHHHHHHHHHHHHhcCCCccCCcCCCCHHHHHHHhcCCCcHHH
Confidence 4567899999999999 999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cchhhhcCCCCCCccccccchh
Q psy6719 94 VLDDQAKFSSSPFPVFRVSREV 115 (126)
Q Consensus 94 lLDee~~~p~~td~sF~~~~~~ 115 (126)
+|||||++|++||++|+++...
T Consensus 440 lLdee~~~~~~~d~~~~~kl~~ 461 (679)
T cd00124 440 LLDEECLFPKGTDETFLEKLNN 461 (679)
T ss_pred HHHHHhCCCCCCHHHHHHHHHH
Confidence 9999999999999999966443
No 15
>cd01386 MYSc_type_XVIII Myosin motor domain, type XVIII myosins. This catalytic (head) domain has ATPase activity and belongs to the larger group of P-loop NTPases. Myosins are actin-dependent molecular motors that play important roles in muscle contraction, cell motility, and organelle transport. The head domain is a molecular motor, which utilizes ATP hydrolysis to generate directed movement toward the plus end along actin filaments. A cyclical interaction between myosin and actin provides the driving force. Rates of ATP hydrolysis and consequently the speed of movement along actin filaments vary widely, from about 0.04 micrometer per second for myosin I to 4.5 micrometer per second for myosin II in skeletal muscle. Myosin II moves in discrete steps about 5-10 nm long and generates 1-5 piconewtons of force. Upon ATP binding, the myosin head dissociates from an actin filament. ATP hydrolysis causes the head to pivot and associate with a new actin subunit. The release of Pi causes the
Probab=99.97 E-value=1.3e-32 Score=239.93 Aligned_cols=100 Identities=28% Similarity=0.404 Sum_probs=91.4
Q ss_pred CCCeeeeeccCcccc-c------cchhHHHhhhhhhHHHHHHHHHhhHhHHHHhhhhCCcceeccc-CCchhhhHhhhcC
Q psy6719 16 GEGSIPAERYGFYPQ-Q------SSFEQLCINYANEHLQYYFNQHVFQYEQEEYNKEGIRWRHIEF-SDNTLCLQLVEGK 87 (126)
Q Consensus 16 ~~~i~ILDi~GFE~~-~------n~feqlciN~~nE~L~~~~~~~~f~~~~~~y~~EgI~~~~i~~-~dn~~~ldLi~~k 87 (126)
...|+||||||||+| . |+|||||||||||+||++|++++|..++++|.+|||+|+.+.+ .||++|++||+++
T Consensus 372 ~~~IgiLDIfGFE~f~~n~~~~~NsfEQLcINyaNEkLQq~f~~~vF~~Eq~eY~~EGI~~~~~~~~~dn~~~i~lid~~ 451 (767)
T cd01386 372 IASIMLVDTPGFQNPASQGKDRAATFEELCHNYLQERLQLLFHHRTFVQPLERYAEEGVEVEFDLAEPSPGTTVALVDQA 451 (767)
T ss_pred CcEEEEEecccccccccccccCCCCHHHHhhhhhHHHHHHHHHHHHHHHHHHHHHhhcCCccccccCCCchhhHHHhhcc
Confidence 456899999999999 4 8999999999999999999999999999999999999986554 7999999999986
Q ss_pred C--------------CcccccchhhhcCCCCCCccccccchh
Q psy6719 88 P--------------NGLLCVLDDQAKFSSSPFPVFRVSREV 115 (126)
Q Consensus 88 p--------------~Gll~lLDee~~~p~~td~sF~~~~~~ 115 (126)
| .|||++|||||++|++||++|++|.+.
T Consensus 452 p~~~~~~~~~~~~~~~GIl~lLDEec~~p~~tD~~f~~kl~~ 493 (767)
T cd01386 452 PQQVVVPAGLRAEDARGLLWLLDEEALVPGSSDDTFLERLFA 493 (767)
T ss_pred cccccccchhhccCCCchhhhhhHhhcCCCCcHHHHHHHHHH
Confidence 5 599999999999999999999976544
No 16
>PF00063 Myosin_head: Myosin head (motor domain); InterPro: IPR001609 Muscle contraction is caused by sliding between the thick and thin filaments of the myofibril. Myosin is a major component of thick filaments and exists as a hexamer of 2 heavy chains [], 2 alkali light chains, and 2 regulatory light chains. The heavy chain can be subdivided into the N-terminal globular head and the C-terminal coiled-coil rod-like tail, although some forms have a globular region in their C-terminal. There are many cell-specific isoforms of myosin heavy chains, coded for by a multi-gene family []. Myosin interacts with actin to convert chemical energy, in the form of ATP, to mechanical energy []. The 3-D structure of the head portion of myosin has been determined [] and a model for actin-myosin complex has been constructed []. The globular head is well conserved, some highly-conserved regions possibly relating to functional and structural domains []. The rod-like tail starts with an invariant proline residue, and contains many repeats of a 28 residue region, interrupted at 4 regularly-spaced points known as skip residues. Although the sequence of the tail is not well conserved, the chemical character is, hydrophobic, charged and skip residues occuring in a highly ordered and repeated fashion [].; GO: 0003774 motor activity, 0005524 ATP binding, 0016459 myosin complex; PDB: 1LKX_A 2V26_A 2BKI_A 3L9I_A 2BKH_A 2X51_A 2VB6_A 2VAS_A 1OE9_A 1W8J_A ....
Probab=99.97 E-value=8.2e-33 Score=238.74 Aligned_cols=101 Identities=45% Similarity=0.755 Sum_probs=88.4
Q ss_pred CCCCeeeeeccCcccc-ccchhHHHhhhhhhHHHHHHHHHhhHhHHHHhhhhCCcceeccc-CCchhhhHhhhcCCCccc
Q psy6719 15 SGEGSIPAERYGFYPQ-QSSFEQLCINYANEHLQYYFNQHVFQYEQEEYNKEGIRWRHIEF-SDNTLCLQLVEGKPNGLL 92 (126)
Q Consensus 15 ~~~~i~ILDi~GFE~~-~n~feqlciN~~nE~L~~~~~~~~f~~~~~~y~~EgI~~~~i~~-~dn~~~ldLi~~kp~Gll 92 (126)
....|+||||||||++ .|+||||||||||||||++|++++|..++++|.+|||.|..++| .||++|+|||+++|.|||
T Consensus 362 ~~~~IgILDi~GFE~~~~N~fEQLciNyanErLq~~f~~~~f~~e~~~y~~EgI~~~~i~~~~dn~~~ldLi~~~~~Gil 441 (689)
T PF00063_consen 362 NSSSIGILDIFGFENFSVNSFEQLCINYANERLQQFFNQHIFKSEQEEYKEEGIDWPFIDFNPDNQPCLDLIEKKPKGIL 441 (689)
T ss_dssp -SEEEEEEEEE-B---SSB-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTSSCSCS-GCGHHHHHHHHHHSSTTSHH
T ss_pred ccccCcccCccccccccccccccceeeeccccccceeeeecccccccccccccccccccccccCchhhhhhhccccCCHH
Confidence 4456889999999999 99999999999999999999999999999999999999999999 999999999999999999
Q ss_pred ccchhhhcCCCCCCccccccchh
Q psy6719 93 CVLDDQAKFSSSPFPVFRVSREV 115 (126)
Q Consensus 93 ~lLDee~~~p~~td~sF~~~~~~ 115 (126)
++|||||++|+++|++|+.++..
T Consensus 442 ~lLdee~~~~~~sd~~fl~kl~~ 464 (689)
T PF00063_consen 442 SLLDEECLLPRGSDESFLEKLLK 464 (689)
T ss_dssp HHHHHHCTSTTS-HHHHHHHHHH
T ss_pred HHhhhhhhcccchhhHHHHHHHh
Confidence 99999999999999999966444
No 17
>KOG0161|consensus
Probab=99.97 E-value=3.4e-32 Score=250.92 Aligned_cols=108 Identities=39% Similarity=0.603 Sum_probs=102.0
Q ss_pred CCCCCCeeeeeccCcccc-ccchhHHHhhhhhhHHHHHHHHHhhHhHHHHhhhhCCcceeccc-CCchhhhHhhhcCCCc
Q psy6719 13 LASGEGSIPAERYGFYPQ-QSSFEQLCINYANEHLQYYFNQHVFQYEQEEYNKEGIRWRHIEF-SDNTLCLQLVEGKPNG 90 (126)
Q Consensus 13 ~~~~~~i~ILDi~GFE~~-~n~feqlciN~~nE~L~~~~~~~~f~~~~~~y~~EgI~~~~i~~-~dn~~~ldLi~~kp~G 90 (126)
......|+||||+|||+| .||||||||||+||+||++|+.++|..++++|.+|||.|.+|+| .|-++|+|||+ +|.|
T Consensus 444 ~~~~~fIgvLDiaGFEIfe~nSFEQLciNytnEkLQqfFnh~mFvlEqeeY~~EgIew~fidfG~Dlq~~idLIE-kp~G 522 (1930)
T KOG0161|consen 444 QQRDYFIGVLDIAGFEIFEFNSFEQLCINYTNEKLQQFFNHHMFVLEQEEYQREGIEWDFIDFGLDLQPTIDLIE-KPMG 522 (1930)
T ss_pred cccCCcceeeeeccccccCcCCHHHHHHHHHHHHHHhhhcchhhhhhHHHHHHhCCceeeeccccchhhhHHHHh-chhh
Confidence 446778999999999999 99999999999999999999999999999999999999999999 79999999999 6889
Q ss_pred ccccchhhhcCCCCCCccccccchhhHHHHHhcCC
Q psy6719 91 LLCVLDDQAKFSSSPFPVFRVSREVGIFQQALNQP 125 (126)
Q Consensus 91 ll~lLDee~~~p~~td~sF~~~~~~~~~~~~~~~~ 125 (126)
|+|+|||||++|++||.||+ .+++.+++++|
T Consensus 523 i~slLdEEc~~PkAtd~tf~----~kL~~~~~gk~ 553 (1930)
T KOG0161|consen 523 ILSLLDEECVVPKATDKTFL----EKLCDQHLGKH 553 (1930)
T ss_pred HHHHHHHHHhcCCCccchHH----HHHHHHhhccC
Confidence 99999999999999999999 77888887665
No 18
>KOG0164|consensus
Probab=99.97 E-value=4.1e-31 Score=225.38 Aligned_cols=99 Identities=37% Similarity=0.591 Sum_probs=93.6
Q ss_pred CCCeeeeeccCcccc-ccchhHHHhhhhhhHHHHHHHHHhhHhHHHHhhhhCCcceecccCCchhhhHhhhcCCCccccc
Q psy6719 16 GEGSIPAERYGFYPQ-QSSFEQLCINYANEHLQYYFNQHVFQYEQEEYNKEGIRWRHIEFSDNTLCLQLVEGKPNGLLCV 94 (126)
Q Consensus 16 ~~~i~ILDi~GFE~~-~n~feqlciN~~nE~L~~~~~~~~f~~~~~~y~~EgI~~~~i~~~dn~~~ldLi~~kp~Gll~l 94 (126)
+..++||||||||+| .|||||||||||||+||+.|++.+++.+|+||.+|||.|..|+|.+|.-++||++.+..|||+|
T Consensus 374 ~~Vigvldiygfeif~~NSFEQfcINYCNEKLQQlFIel~LKqEQEEY~rEgI~W~~i~YFnN~iIcdLvE~~~~GIlai 453 (1001)
T KOG0164|consen 374 NTVIGVLDIYGFEIFQDNSFEQFCINYCNEKLQQLFIELVLKQEQEEYEREGIEWTHIDYFNNKIICDLVEQPHKGILAI 453 (1001)
T ss_pred ceEEEEEEeeeEEeecCCcHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHhcCCCceehhhcCCceeeehhccCccchhhh
Confidence 566789999999999 9999999999999999999999999999999999999999999999999999999999999999
Q ss_pred chhhhcCCC-CCCccccccch
Q psy6719 95 LDDQAKFSS-SPFPVFRVSRE 114 (126)
Q Consensus 95 LDee~~~p~-~td~sF~~~~~ 114 (126)
|||||+.|+ .||.+|+++=+
T Consensus 454 lDe~Cl~~G~vtD~tfL~~l~ 474 (1001)
T KOG0164|consen 454 LDEACLRPGTVTDETFLEKLN 474 (1001)
T ss_pred hhHHhcCCCccchHHHHHHHH
Confidence 999999986 78888886633
No 19
>KOG0163|consensus
Probab=99.96 E-value=9.6e-30 Score=218.09 Aligned_cols=101 Identities=40% Similarity=0.625 Sum_probs=96.3
Q ss_pred CCCCCeeeeeccCcccc-ccchhHHHhhhhhhHHHHHHHHHhhHhHHHHhhhhCCcceecccCCchhhhHhhhcCCCccc
Q psy6719 14 ASGEGSIPAERYGFYPQ-QSSFEQLCINYANEHLQYYFNQHVFQYEQEEYNKEGIRWRHIEFSDNTLCLQLVEGKPNGLL 92 (126)
Q Consensus 14 ~~~~~i~ILDi~GFE~~-~n~feqlciN~~nE~L~~~~~~~~f~~~~~~y~~EgI~~~~i~~~dn~~~ldLi~~kp~Gll 92 (126)
.+...|+||||+|||.| .|||||||||||||+||++|+++++..+|+.|.+||+.++.|.|.||++|++||+.|..||+
T Consensus 448 ~St~fiGVLDiAGFEyf~~NSFEQFCINyCNEKLQ~FFNerILkeEQElYekEGLnv~ei~f~DNqDcIeL~E~K~~Gif 527 (1259)
T KOG0163|consen 448 KSTFFIGVLDIAGFEYFAVNSFEQFCINYCNEKLQKFFNERILKEEQELYEKEGLNVPEIEFTDNQDCIELIEAKSNGIF 527 (1259)
T ss_pred cccceeEEEeeccceeeecccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCceEeccchhHHHHHHHhccchh
Confidence 35667899999999999 99999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccchhhhcCCCCCCccccccch
Q psy6719 93 CVLDDQAKFSSSPFPVFRVSRE 114 (126)
Q Consensus 93 ~lLDee~~~p~~td~sF~~~~~ 114 (126)
.|||||+++|++++++|+.+-+
T Consensus 528 dlLDEEaklP~~s~qhFT~~vH 549 (1259)
T KOG0163|consen 528 DLLDEEAKLPKPSYQHFTARVH 549 (1259)
T ss_pred hhhhhhccCCCcchHHHHHHHH
Confidence 9999999999999999995533
No 20
>KOG0160|consensus
Probab=99.94 E-value=3e-27 Score=206.53 Aligned_cols=97 Identities=46% Similarity=0.731 Sum_probs=93.4
Q ss_pred CCCCeeeeeccCcccc-ccchhHHHhhhhhhHHHHHHHHHhhHhHHHHhhhhCCcceecccCCchhhhHhhhcCCCcccc
Q psy6719 15 SGEGSIPAERYGFYPQ-QSSFEQLCINYANEHLQYYFNQHVFQYEQEEYNKEGIRWRHIEFSDNTLCLQLVEGKPNGLLC 93 (126)
Q Consensus 15 ~~~~i~ILDi~GFE~~-~n~feqlciN~~nE~L~~~~~~~~f~~~~~~y~~EgI~~~~i~~~dn~~~ldLi~~kp~Gll~ 93 (126)
+...|+||||||||.| .|+||||||||+||+||+.|++|+|+.++++|..|+|.|..++|.||++|+++|+. |.|+++
T Consensus 366 ~~~~igVLDiYgFEsF~~nsfeQfcINyanEkLqq~fnqHvfk~Eqeey~~e~i~Ws~ief~dNq~~~~lie~-~~Gi~~ 444 (862)
T KOG0160|consen 366 AERFIGVLDIYGFESFEVNSFEQFCINYANEKLQQQFNQHVFKLEQEEYTKEEIDWSGIEFRDNQECLDLIEK-PLGILA 444 (862)
T ss_pred ccceeeeehcccccccccCcHHHhhhhhHHHHhhHHHHHHHHHHHHHHHHhhccccccccCcCccchhhhhcc-ccchhh
Confidence 4567889999999999 99999999999999999999999999999999999999999999999999999996 999999
Q ss_pred cchhhhcCCCCCCcccccc
Q psy6719 94 VLDDQAKFSSSPFPVFRVS 112 (126)
Q Consensus 94 lLDee~~~p~~td~sF~~~ 112 (126)
+|||+|++|+++|++|..|
T Consensus 445 Llde~c~lp~~t~~~~a~K 463 (862)
T KOG0160|consen 445 LLDEECMLPKGTDETLAQK 463 (862)
T ss_pred ccchhccCCCCCcchHHHH
Confidence 9999999999999999944
No 21
>KOG0162|consensus
Probab=99.93 E-value=2.1e-26 Score=197.12 Aligned_cols=96 Identities=33% Similarity=0.573 Sum_probs=87.5
Q ss_pred CCCeeeeeccCcccc-ccchhHHHhhhhhhHHHHHHHHHhhHhHHHHhhhhCCcceecccCCchhhhHhhhc-CCCcccc
Q psy6719 16 GEGSIPAERYGFYPQ-QSSFEQLCINYANEHLQYYFNQHVFQYEQEEYNKEGIRWRHIEFSDNTLCLQLVEG-KPNGLLC 93 (126)
Q Consensus 16 ~~~i~ILDi~GFE~~-~n~feqlciN~~nE~L~~~~~~~~f~~~~~~y~~EgI~~~~i~~~dn~~~ldLi~~-kp~Gll~ 93 (126)
..+|+||||||||+| .|+|||+||||.||+||+.|++.+++.||++|.+|||.|.+|.|.||.-++|||+. .|.||++
T Consensus 382 ~~sIGiLDIYGFEIFe~N~FEQ~CINfVNEKLQQIFIeLTLKaEQEeYvrE~I~WTpIkYFnNKvVCDLIE~K~PPGims 461 (1106)
T KOG0162|consen 382 EYSIGILDIYGFEIFENNGFEQFCINFVNEKLQQIFIELTLKAEQEEYVREGIKWTPIKYFNNKVVCDLIENKRPPGIMS 461 (1106)
T ss_pred ccceeeEEeeeeeecccCCHHHHHHHHHHHHHHHHHHHHhhhhhHHHHHHhcccccchhhcCCeeeeehhhccCCchHHH
Confidence 456789999999999 99999999999999999999999999999999999999999999999999999997 5789999
Q ss_pred cchhhhcCC----CCCCccccc
Q psy6719 94 VLDDQAKFS----SSPFPVFRV 111 (126)
Q Consensus 94 lLDee~~~p----~~td~sF~~ 111 (126)
+|||.|... .+.|..|..
T Consensus 462 ~ldD~~At~Ha~~~~aDqa~~q 483 (1106)
T KOG0162|consen 462 ALDDVCATAHADSEGADQALLQ 483 (1106)
T ss_pred HHHHHHHHhccccchhHHHHHH
Confidence 999999853 455666663
No 22
>KOG4229|consensus
Probab=99.91 E-value=2.5e-25 Score=198.07 Aligned_cols=100 Identities=44% Similarity=0.759 Sum_probs=96.6
Q ss_pred CCCeeeeeccCcccc-ccchhHHHhhhhhhHHHHHHHHHhhHhHHHHhhhhCCcceecccCCchhhhHhhhcCCCccccc
Q psy6719 16 GEGSIPAERYGFYPQ-QSSFEQLCINYANEHLQYYFNQHVFQYEQEEYNKEGIRWRHIEFSDNTLCLQLVEGKPNGLLCV 94 (126)
Q Consensus 16 ~~~i~ILDi~GFE~~-~n~feqlciN~~nE~L~~~~~~~~f~~~~~~y~~EgI~~~~i~~~dn~~~ldLi~~kp~Gll~l 94 (126)
...|+||||||||+| .|+|||+|||||||+||.||.+++|..++++|..|+|.|..+.|.||..|+|+|..||+||+.+
T Consensus 426 ~~~IgiLdiFgfE~f~~nsfEq~~in~Ane~lQ~~fnqhIf~~Eq~ey~~e~I~w~~i~~~dN~~~ldli~~kp~gil~l 505 (1062)
T KOG4229|consen 426 ILSIGILDIFGFENFERNSFEQLCINLANEQLQYYFNQHIFALEQEEYDNESIDWRNIEFADNRRRLDLISPKPMGILSL 505 (1062)
T ss_pred cceeehhhhhcccchhhhHHHHHHHHHHHHHHHHHHHHHHHHHhHHHhhhcCCCeeeeeeeeccchhhhhccCccchhhe
Confidence 456889999999999 9999999999999999999999999999999999999999999999999999999999999999
Q ss_pred chhhhcCCCCCCccccccchh
Q psy6719 95 LDDQAKFSSSPFPVFRVSREV 115 (126)
Q Consensus 95 LDee~~~p~~td~sF~~~~~~ 115 (126)
||||+.||++||.+.+.|++.
T Consensus 506 iDees~fP~~td~tl~~k~~~ 526 (1062)
T KOG4229|consen 506 IDEESRFPKATDQTLLLKLNM 526 (1062)
T ss_pred ecccCcCCchHHHHHHHHhhh
Confidence 999999999999999988765
No 23
>KOG2655|consensus
Probab=37.53 E-value=33 Score=28.50 Aligned_cols=32 Identities=19% Similarity=0.317 Sum_probs=23.7
Q ss_pred eeeeccCcccc-ccch-hHHHhhhhhhHHHHHHH
Q psy6719 20 IPAERYGFYPQ-QSSF-EQLCINYANEHLQYYFN 51 (126)
Q Consensus 20 ~ILDi~GFE~~-~n~f-eqlciN~~nE~L~~~~~ 51 (126)
+|+|+|||-.+ .|+. -+-.++|..++..+|+.
T Consensus 82 tvidtPGfGD~vdns~~w~pi~~yi~~q~~~yl~ 115 (366)
T KOG2655|consen 82 TVIDTPGFGDAVDNSNCWRPIVNYIDSQFDQYLD 115 (366)
T ss_pred EEeccCCCcccccccccchhhhHHHHHHHHHHHh
Confidence 58999999988 4432 25567888888888763
No 24
>COG5019 CDC3 Septin family protein [Cell division and chromosome partitioning / Cytoskeleton]
Probab=36.27 E-value=45 Score=27.81 Aligned_cols=32 Identities=16% Similarity=0.257 Sum_probs=22.0
Q ss_pred eeeeeccCcccc-ccch-hHHHhhhhhhHHHHHH
Q psy6719 19 SIPAERYGFYPQ-QSSF-EQLCINYANEHLQYYF 50 (126)
Q Consensus 19 i~ILDi~GFE~~-~n~f-eqlciN~~nE~L~~~~ 50 (126)
+.|+|+|||-.+ .|+. -+-.++|..++..+|+
T Consensus 84 l~vIDtpGfGD~idNs~~we~I~~yI~~q~d~yl 117 (373)
T COG5019 84 LTVIDTPGFGDFIDNSKCWEPIVDYIDDQFDQYL 117 (373)
T ss_pred EEEeccCCccccccccccHHHHHHHHHHHHHHHH
Confidence 369999999998 4432 2445577777766655
No 25
>cd01850 CDC_Septin CDC/Septin. Septins are a conserved family of GTP-binding proteins associated with diverse processes in dividing and non-dividing cells. They were first discovered in the budding yeast S. cerevisiae as a set of genes (CDC3, CDC10, CDC11 and CDC12) required for normal bud morphology. Septins are also present in metazoan cells, where they are required for cytokinesis in some systems, and implicated in a variety of other processes involving organization of the cell cortex and exocytosis. In humans, 12 septin genes generate dozens of polypeptides, many of which comprise heterooligomeric complexes. Since septin mutants are commonly defective in cytokinesis and formation of the neck formation of the neck filaments/septin rings, septins have been considered to be the primary constituents of the neck filaments. Septins belong to the GTPase superfamily for their conserved GTPase motifs and enzymatic activities.
Probab=36.18 E-value=47 Score=25.96 Aligned_cols=32 Identities=16% Similarity=0.313 Sum_probs=22.5
Q ss_pred eeeeeccCcccc-ccc-hhHHHhhhhhhHHHHHH
Q psy6719 19 SIPAERYGFYPQ-QSS-FEQLCINYANEHLQYYF 50 (126)
Q Consensus 19 i~ILDi~GFE~~-~n~-feqlciN~~nE~L~~~~ 50 (126)
+.|+|+|||..+ .|+ --+-.++|..+++..|.
T Consensus 65 l~iiDTpGfgd~~~~~~~~~~i~~yi~~q~~~~l 98 (276)
T cd01850 65 LTVIDTPGFGDNINNSDCWKPIVDYIDDQFDQYL 98 (276)
T ss_pred EEEEecCCccccccchhhHHHHHHHHHHHHHHHH
Confidence 469999999887 432 22456678887777665
No 26
>COG5211 SSU72 RNA polymerase II-interacting protein involved in transcription start site selection [Transcription]
Probab=32.88 E-value=16 Score=27.23 Aligned_cols=30 Identities=30% Similarity=0.254 Sum_probs=21.7
Q ss_pred Ccccccchh--------hhcCCCCCCccccccchhhHH
Q psy6719 89 NGLLCVLDD--------QAKFSSSPFPVFRVSREVGIF 118 (126)
Q Consensus 89 ~Gll~lLDe--------e~~~p~~td~sF~~~~~~~~~ 118 (126)
.|||-+||. |-++.+..+=.|+..|++|.|
T Consensus 80 nGlL~mLdRNrrvK~aPe~wq~~~~~fd~ViTCEERcf 117 (197)
T COG5211 80 NGLLYMLDRNRRVKEAPENWQQRSEDFDLVITCEERCF 117 (197)
T ss_pred ccHHHHHHhcchhhhCchhhhhccccccEEEEehHHHH
Confidence 466666663 344556788889999999988
No 27
>KOG1547|consensus
Probab=30.51 E-value=75 Score=25.62 Aligned_cols=48 Identities=15% Similarity=0.261 Sum_probs=30.9
Q ss_pred eeeeccCcccc---ccchhHHHhhhhhhHHHHHHHHHhhHhHHHHhhhhCCc
Q psy6719 20 IPAERYGFYPQ---QSSFEQLCINYANEHLQYYFNQHVFQYEQEEYNKEGIR 68 (126)
Q Consensus 20 ~ILDi~GFE~~---~n~feqlciN~~nE~L~~~~~~~~f~~~~~~y~~EgI~ 68 (126)
.|+|.|||--. .|.+ +-.+-|.||+--+|..+-+-.........-.+.
T Consensus 107 tviDTPGfGDqInN~ncW-ePI~kyIneQye~yL~eElni~R~kripDTRVH 157 (336)
T KOG1547|consen 107 TVIDTPGFGDQINNDNCW-EPIEKYINEQYEQYLREELNIAREKRIPDTRVH 157 (336)
T ss_pred EEecCCCcccccCccchh-HHHHHHHHHHHHHHHHHHHhHHhhhcCCCceEE
Confidence 59999999888 4455 445689999888877554444333333434443
No 28
>PF00735 Septin: Septin; InterPro: IPR000038 Septins constitute a eukaryotic family of guanine nucleotide-binding proteins, most of which polymerise to form filaments []. Members of the family were first identified by genetic screening for Saccharomyces cerevisiae (Baker's yeast) mutants defective in cytokinesis []. Temperature-sensitive mutations in four genes, CDC3, CDC10, CDC11 and CDC12, were found to cause cell-cycle arrest and defects in bud growth and cytokinesis. The protein products of these genes localise at the division plane between mother and daughter cells, indicating a role in mother-daughter separation during cytokinesis []. Members of the family were therefore termed septins to reflect their role in septation and cell division. The identification of septin homologues in higher eukaryotes, which localise to the cleavage furrow in dividing cells, supports an orthologous function in cytokinesis. Septins have since been identified in most eukaryotes, except plants []. Septins are approximately 40-50 kDa in molecular mass, and typically comprise a conserved central core domain (more than 35% sequence identity between mammalian and yeast homologues) flanked by more divergent N- and C-termini. Most septins possess a P-loop motif in their N-terminal domain (which is characteristic of GTP-binding proteins), and a predicted C-terminal coiled-coil domain []. A number of septin interaction partners have been identified in yeast, many of which are components of the budding site selection machinery, kinase cascades or of the ubiquitination pathway. It has been proposed that septins may act as a scaffold that provides an interaction matrix for other proteins [, ]. In mammals, septins have been shown to regulate vesicle dynamics []. Mammalian septins have also been implicated in a variety of other cellular processes, including apoptosis, carcinogenesis and neurodegeneration []. This entry represents a variety of septins and homologous sequences involved in the cell division process.; GO: 0005525 GTP binding, 0007049 cell cycle; PDB: 2QAG_B 3FTQ_D 2QA5_A 2QNR_B 3TW4_A 3T5D_C.
Probab=25.44 E-value=92 Score=24.56 Aligned_cols=32 Identities=16% Similarity=0.260 Sum_probs=21.1
Q ss_pred eeeeccCcccc-ccch-hHHHhhhhhhHHHHHHH
Q psy6719 20 IPAERYGFYPQ-QSSF-EQLCINYANEHLQYYFN 51 (126)
Q Consensus 20 ~ILDi~GFE~~-~n~f-eqlciN~~nE~L~~~~~ 51 (126)
.|+|+|||... .|.. -+..++|..+++..+..
T Consensus 66 tiiDTpGfGd~i~n~~~~~~I~~yI~~qf~~~l~ 99 (281)
T PF00735_consen 66 TIIDTPGFGDNIDNSDCWEPIVDYIESQFDSYLE 99 (281)
T ss_dssp EEEEEC-CSSSSTHCHHHHHHHHHHHHHHHHHHH
T ss_pred EEEeCCCccccccchhhhHHHHHHHHHHHHHHHH
Confidence 59999999877 4432 24566888887776543
Done!