Query psy6720
Match_columns 182
No_of_seqs 123 out of 283
Neff 5.2
Searched_HMMs 29240
Date Fri Aug 16 16:42:19 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy6720.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/6720hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2i7n_A Pantothenate kinase 1; 100.0 3E-49 1E-53 352.3 13.3 159 5-164 194-357 (360)
2 2ews_A Pantothenate kinase; PA 100.0 7.9E-40 2.7E-44 283.6 17.1 158 2-164 125-285 (287)
3 4ehu_A Activator of 2-hydroxyi 97.8 0.00022 7.5E-09 58.8 11.7 130 5-160 113-247 (276)
4 1hux_A Activator of (R)-2-hydr 97.8 0.00015 5.3E-09 60.7 10.1 111 18-155 132-245 (270)
5 2w40_A Glycerol kinase, putati 94.5 0.54 1.9E-05 42.1 12.7 121 7-135 304-430 (503)
6 3h3n_X Glycerol kinase; ATP-bi 94.0 0.68 2.3E-05 41.6 12.2 132 8-152 301-437 (506)
7 3g25_A Glycerol kinase; IDP007 94.0 0.67 2.3E-05 41.6 12.1 133 8-153 302-439 (501)
8 2d4w_A Glycerol kinase; alpha 93.7 0.73 2.5E-05 41.3 11.9 121 7-135 300-426 (504)
9 2p3r_A Glycerol kinase; glycer 93.6 0.64 2.2E-05 41.9 11.3 134 7-153 298-436 (510)
10 2zf5_O Glycerol kinase; hypert 93.5 1.1 3.6E-05 40.1 12.6 133 7-153 292-428 (497)
11 2ivn_A O-sialoglycoprotein end 93.1 0.61 2.1E-05 39.8 9.9 133 4-150 139-279 (330)
12 3vth_A Hydrogenase maturation 92.6 0.62 2.1E-05 44.9 10.1 66 81-150 663-728 (761)
13 3eno_A Putative O-sialoglycopr 92.6 0.73 2.5E-05 39.6 9.7 139 3-151 144-285 (334)
14 3i8b_A Xylulose kinase; strain 92.4 3.1 0.00011 37.6 14.1 123 5-135 321-447 (515)
15 2dpn_A Glycerol kinase; thermu 92.3 1 3.5E-05 40.2 10.6 121 7-135 296-421 (495)
16 4g9i_A Hydrogenase maturation 92.1 0.3 1E-05 47.1 7.2 94 81-180 675-772 (772)
17 3hz6_A Xylulokinase; xylulose, 92.1 1.1 3.9E-05 40.2 10.7 121 7-135 296-425 (511)
18 4e1j_A Glycerol kinase; struct 91.2 1.8 6E-05 39.2 11.0 121 8-135 321-448 (520)
19 2itm_A Xylulose kinase, xylulo 90.4 8.9 0.00031 33.9 15.0 135 6-154 283-422 (484)
20 3ifr_A Carbohydrate kinase, FG 89.1 9.5 0.00033 34.1 13.9 133 6-151 293-433 (508)
21 3ven_A O-carbamoyltransferase 89.1 2.6 8.8E-05 39.5 10.4 128 4-131 157-327 (576)
22 3jvp_A Ribulokinase; PSI-II, N 88.8 6.1 0.00021 36.0 12.6 125 5-135 323-463 (572)
23 3ttc_A HYPF, transcriptional r 88.6 1.5 5.1E-05 41.7 8.5 64 81-150 569-632 (657)
24 3en9_A Glycoprotease, O-sialog 88.5 2.3 7.7E-05 38.5 9.4 137 3-150 143-283 (540)
25 3ll3_A Gluconate kinase; xylul 88.2 6.7 0.00023 35.1 12.2 124 5-135 287-416 (504)
26 2qm1_A Glucokinase; alpha-beta 81.8 9.2 0.00032 31.3 9.3 71 85-155 236-310 (326)
27 3r8e_A Hypothetical sugar kina 81.5 12 0.00041 31.0 10.1 70 86-155 235-308 (321)
28 3vgl_A Glucokinase; ROK family 81.4 14 0.00048 30.6 10.4 70 86-155 227-301 (321)
29 3ezw_A Glycerol kinase; glycer 80.4 19 0.00064 32.3 11.5 133 8-153 300-437 (526)
30 3qbx_A Anhydro-N-acetylmuramic 78.8 4.6 0.00016 35.9 6.8 107 23-134 192-305 (371)
31 3cqy_A Anhydro-N-acetylmuramic 77.5 5.5 0.00019 35.3 6.9 106 24-135 200-312 (370)
32 4bc3_A Xylulose kinase; transf 77.1 15 0.00052 33.0 10.0 136 8-153 332-469 (538)
33 2hoe_A N-acetylglucosamine kin 75.8 22 0.00074 30.3 10.1 69 85-153 288-358 (380)
34 2gup_A ROK family protein; sug 75.5 28 0.00097 28.0 10.4 53 85-138 201-253 (292)
35 4htl_A Beta-glucoside kinase; 75.3 13 0.00046 30.4 8.4 69 86-155 212-280 (297)
36 2iir_A Acetate kinase; transfe 75.0 14 0.00048 33.1 9.0 54 86-139 296-350 (403)
37 1z6r_A MLC protein; transcript 71.9 26 0.00087 29.9 9.6 73 86-158 309-387 (406)
38 2ch5_A NAGK protein; transfera 70.5 18 0.00062 29.8 8.1 55 85-139 231-293 (347)
39 4ijn_A Acetate kinase, acetoki 67.6 16 0.00056 32.7 7.6 54 86-139 297-351 (398)
40 2e2o_A Hexokinase; acetate and 67.3 31 0.0011 27.8 8.8 53 85-138 213-265 (299)
41 1z05_A Transcriptional regulat 66.1 43 0.0015 28.9 9.9 54 86-139 332-385 (429)
42 3vov_A Glucokinase, hexokinase 64.1 30 0.001 28.4 8.2 54 86-139 212-266 (302)
43 2aa4_A Mannac kinase, putative 63.2 22 0.00074 28.6 7.0 70 85-155 207-277 (289)
44 1saz_A Probable butyrate kinas 63.2 22 0.00075 30.6 7.4 54 86-139 268-323 (381)
45 1g99_A Acetate kinase; alpha/b 62.7 21 0.00072 32.0 7.4 55 86-140 296-351 (408)
46 3r9p_A ACKA; ssgcid, seattle s 61.0 19 0.00067 32.1 6.8 54 86-139 288-342 (391)
47 4h0o_A Acetate kinase; askha ( 60.4 48 0.0017 29.7 9.3 53 87-139 301-354 (404)
48 2e1z_A Propionate kinase; TDCD 60.0 20 0.0007 32.2 6.8 55 86-140 304-359 (415)
49 2uyt_A Rhamnulokinase; rhamnos 56.7 50 0.0017 28.9 8.7 54 81-135 361-416 (489)
50 3khy_A Propionate kinase; csgi 55.5 32 0.0011 30.6 7.2 53 87-139 288-341 (384)
51 2ap1_A Putative regulator prot 54.6 24 0.00082 29.0 6.0 45 86-130 244-288 (327)
52 2o3a_A UPF0106 protein AF_0751 53.7 24 0.00082 28.3 5.5 37 99-139 20-56 (178)
53 3l0q_A Xylulose kinase; xlylul 52.1 1.3E+02 0.0045 26.9 14.8 136 5-153 315-477 (554)
54 4db3_A Glcnac kinase, N-acetyl 51.6 77 0.0026 26.2 8.7 74 86-161 244-320 (327)
55 2q2r_A Glucokinase 1, putative 47.6 1.1E+02 0.0037 25.6 9.2 52 85-136 278-331 (373)
56 2yy8_A ATRM56, UPF0106 protein 47.5 34 0.0012 28.0 5.5 38 99-139 17-54 (201)
57 1nrz_A PTS system, sorbose-spe 42.6 26 0.0009 27.3 4.1 52 100-155 15-66 (164)
58 3mcp_A Glucokinase; structural 41.8 99 0.0034 26.5 8.1 54 86-140 234-287 (366)
59 3eye_A PTS system N-acetylgala 39.2 22 0.00074 28.0 3.1 52 100-155 20-72 (168)
60 1vsq_C Mannose-specific phosph 35.4 26 0.0009 27.3 3.1 52 100-155 18-69 (165)
61 2yhw_A Bifunctional UDP-N-acet 30.9 1.5E+02 0.0052 24.2 7.3 49 86-137 259-307 (343)
62 3h1q_A Ethanolamine utilizatio 30.0 1.3E+02 0.0044 23.5 6.5 63 91-161 205-268 (272)
63 1ble_A Fructose permease; phos 29.5 26 0.00089 27.3 2.1 52 100-155 16-67 (163)
64 1bdg_A Hexokinase; phosphotran 28.8 2.2E+02 0.0076 25.1 8.4 53 87-139 366-420 (451)
65 3lfj_A Manxb, phosphotransfera 28.1 25 0.00085 28.2 1.8 50 100-153 36-85 (187)
66 3p3v_A PTS system, N-acetylgal 22.5 36 0.0012 26.5 1.7 50 100-154 19-68 (163)
67 3sk3_A Acetate kinase, acetoki 22.1 72 0.0024 28.6 3.8 105 29-139 259-367 (415)
No 1
>2i7n_A Pantothenate kinase 1; PANK, transferase; HET: ACO; 1.90A {Homo sapiens} SCOP: c.55.1.14 c.55.1.14 PDB: 3smp_A* 3sms_A* 2i7p_A* 3mk6_A*
Probab=100.00 E-value=3e-49 Score=352.32 Aligned_cols=159 Identities=70% Similarity=1.063 Sum_probs=151.1
Q ss_pred CCCceEecccccchhhHHHHHHhhcCCCCHHHHHHHHhcCCCCCCcceeccccCCCCCCcc-----cccccccccccccc
Q psy6720 5 NLSPLCVLLTSLGGGTFLGLCCLLTGCNSFEEAIELATSGDNTKVDKLVRDIYGGSYERFL-----GMFSFGHMNSKEKR 79 (182)
Q Consensus 5 ~~~~~rvgGs~iGGGT~~GL~~LLtg~~~f~ei~~lA~~Gd~~~vDllV~DIyg~~~~~lg-----iASsFGK~~~~~~~ 79 (182)
+++|+||+||++||||||||++|||++.||||+++||++||+++|||+|+||||++|+++| +||||||+....++
T Consensus 194 ~~~f~rvgG~siGGGTflGL~~lLtg~~~~dEl~~lA~~Gd~~~vDllV~DIYg~~y~~~gL~~~~~ASsFGk~~~~~~~ 273 (360)
T 2i7n_A 194 KDNYKRVTGTSLGGGTFLGLCCLLTGCETFEEALEMAAKGDSTNVDKLVKDIYGGDYERFGLQGSAVASSFGNMMSKEKR 273 (360)
T ss_dssp TTEEEEEEEESCSHHHHHHHHHHHHCCCSHHHHHHHHHHCCGGGTSEEHHHHHSSCBGGGTBCTTSEEETTTTTTSHHHH
T ss_pred CCCEEEeccccCccHhHHHHHHHHhCCCCHHHHHHHHHcCCCCcccceeeecccCcccccCCCccceeehhhhHhhHhhh
Confidence 5699999999999999999999999999999999999999999999999999999999776 99999999765545
Q ss_pred cCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEEEcccccccHHHHHHHHHHHHHHhcCCceEEEecCCchhhhhh
Q psy6720 80 ESVSREDLARATLVTITNNIGSIARMSAINENINKVVFVGNFLRVNPISMKLLAYAMDYWSKGTQKALFLEHEVCIIGIF 159 (182)
Q Consensus 80 ~~~~~eDia~SLl~Mv~~nIg~la~l~A~~~~i~~Ivf~G~~i~~~~~~m~~i~~ai~yws~g~~~alFl~h~gyl~ga~ 159 (182)
+.+++||||+||+.||+++|+|+|+|+|+.+++++|||+|+|+++||.+|++|+++++|||+++++++|++|++|+ ||+
T Consensus 274 ~~~~~eDIa~gll~sVa~~I~~lA~l~A~~~~i~~IvftGgfla~n~~~~~~L~~~l~~ws~g~~~~~~~~~~~y~-GAl 352 (360)
T 2i7n_A 274 DSISKEDLARATLVTITNNIGSIARMCALNENIDRVVFVGNFLRINMVSMKLLAYAMDFWSKGQLKALFLEHEGYF-GAV 352 (360)
T ss_dssp TTCCHHHHHHHHHHHHHHHHHHHHHHHHHHHTCCCEEEESGGGCSSSHHHHHHHHHHHHHTTTSCCEEEETTTTCH-HHH
T ss_pred cCCCHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCeEEEeCcccccCHHHHHHHHHHHhhhhcCCeeEEEcCCccHH-HHH
Confidence 6899999999999999999999999999999999999999999999999999999999999999999999999999 888
Q ss_pred HHhhc
Q psy6720 160 DHWTS 164 (182)
Q Consensus 160 ~a~~~ 164 (182)
||...
T Consensus 353 GAaL~ 357 (360)
T 2i7n_A 353 GALLE 357 (360)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 87654
No 2
>2ews_A Pantothenate kinase; PANK, structural genomics, structural genomics consortium, S transferase; HET: ANP; 2.05A {Staphylococcus aureus subsp} SCOP: c.55.1.14
Probab=100.00 E-value=7.9e-40 Score=283.64 Aligned_cols=158 Identities=20% Similarity=0.277 Sum_probs=140.9
Q ss_pred CcCCCCceEecccccchhhHHHHHHhhcCCCCHHHHHHHHhcCCCCCCcceeccccCCCCCCcc---ccccccccccccc
Q psy6720 2 KIPNLSPLCVLLTSLGGGTFLGLCCLLTGCNSFEEAIELATSGDNTKVDKLVRDIYGGSYERFL---GMFSFGHMNSKEK 78 (182)
Q Consensus 2 ~~~~~~~~rvgGs~iGGGT~~GL~~LLtg~~~f~ei~~lA~~Gd~~~vDllV~DIyg~~~~~lg---iASsFGK~~~~~~ 78 (182)
+|.+++|+|++||++||||||||+++|+++.|++|+.+||++||++++||+|+|||+++++++. +||+|||+.. ..
T Consensus 125 ~v~~~~f~r~~g~aaGgGtFl~l~a~ll~~~~~~el~~lA~~g~~~~vDl~v~DIy~~~~~~l~~~s~as~Fgk~~~-l~ 203 (287)
T 2ews_A 125 YFDGQSQRRVGGIGTGGGMIQGLGYLLSQITDYKQLTDMAQHGDRNTIDLKVRHIYKDTEPPIPGDLTAANFGHVLH-HL 203 (287)
T ss_dssp EECSSCEEEEEEESCSHHHHHHHHHHHHCCCCHHHHHHHHTTCCCTTTCEETTTC-------CCTTSEEETTTTGGG-CT
T ss_pred EEcCCceEEcCccccchhhHHHHHHHHhCCCCHHHHHHHHHcCCccccccchhhhcCCCCCCcCcchhhHHHHHHHH-HH
Confidence 4567799999999999999999999999999999999999999999999999999999888775 9999999764 23
Q ss_pred ccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEEEcccccccHHHHHHHHHHHHHHhcCCceEEEecCCchhhhh
Q psy6720 79 RESVSREDLARATLVTITNNIGSIARMSAINENINKVVFVGNFLRVNPISMKLLAYAMDYWSKGTQKALFLEHEVCIIGI 158 (182)
Q Consensus 79 ~~~~~~eDia~SLl~Mv~~nIg~la~l~A~~~~i~~Ivf~G~~i~~~~~~m~~i~~ai~yws~g~~~alFl~h~gyl~ga 158 (182)
.+.+++||||+||+.||+++|+++|+++|+.+++++|+|+|.+++.||.++++++ ++|+..+.+++|++|++|+ ||
T Consensus 204 ~~g~~~eDIaasl~~sV~~~I~~la~~~a~~~~i~~Vvf~Gg~l~~n~~l~~~l~---~~~~~~~~~~~~p~~~~~~-gA 279 (287)
T 2ews_A 204 DADFTPSNKLAAVIGVVGEVVTTMAITVAREFKTENIVYIGSSFHNNALLRKVVE---DYTVLRGCKPYYVENGAFS-GA 279 (287)
T ss_dssp TSCCCHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCEEEEESGGGTTCHHHHHHHH---HHHHHTTCEEEECTTGGGH-HH
T ss_pred hCCCCHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEeCCchhcCHHHHHHHH---HHHhhCCceEEECCCccHH-HH
Confidence 5689999999999999999999999999999999999999999999999999999 7899999999999999999 88
Q ss_pred hHHhhc
Q psy6720 159 FDHWTS 164 (182)
Q Consensus 159 ~~a~~~ 164 (182)
+||...
T Consensus 280 lGAaL~ 285 (287)
T 2ews_A 280 IGALYL 285 (287)
T ss_dssp HHHHHT
T ss_pred HHHHHh
Confidence 887654
No 3
>4ehu_A Activator of 2-hydroxyisocaproyl-COA dehydratase; actin fold, ATPase, electron transfer, ATP/ADP binding; HET: ANP; 1.60A {Clostridium difficile} PDB: 4eht_A* 4eia_A
Probab=97.81 E-value=0.00022 Score=58.83 Aligned_cols=130 Identities=17% Similarity=0.168 Sum_probs=87.4
Q ss_pred CCCce--Eeccc-ccchhhHH-HHHHhhcCCCCHHHHHHHHhcCCCCCCcceeccccCCCCCCccccccccccccc-ccc
Q psy6720 5 NLSPL--CVLLT-SLGGGTFL-GLCCLLTGCNSFEEAIELATSGDNTKVDKLVRDIYGGSYERFLGMFSFGHMNSK-EKR 79 (182)
Q Consensus 5 ~~~~~--rvgGs-~iGGGT~~-GL~~LLtg~~~f~ei~~lA~~Gd~~~vDllV~DIyg~~~~~lgiASsFGK~~~~-~~~ 79 (182)
++.++ ..+++ ..|+|-+. =++++| + .++++.-+++++.+.. .+ |. ....+|.|.... ...
T Consensus 113 ~g~~~~~~~~~~~~~g~G~f~d~~a~~l-~-~~~~~~~~~~~~a~~~-~~-----i~-------~~~~~f~~s~~~~~~~ 177 (276)
T 4ehu_A 113 NGRLLNFLMNDKCAAGTGRFLDVMAKII-E-VDVSELGSISMNSQNE-VS-----IS-------STCTVFAESEVISHLS 177 (276)
T ss_dssp TSCEEEEEEECSCSTTSHHHHHHHHHHH-T-CCGGGHHHHHTTCSSC-CC-----CC-------CCSHHHHHHHHHHHHH
T ss_pred cCceEEEEeCCCcCcchhhHHHHHHHHh-c-cChhhhHHHHhcCCCC-CC-----cC-------CccchhhhhHHHHhhh
Confidence 34444 44555 56777666 455555 4 3677888888777531 11 11 134566553211 113
Q ss_pred cCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEEEcccccccHHHHHHHHHHHHHHhcCCceEEEecCCchhhhhh
Q psy6720 80 ESVSREDLARATLVTITNNIGSIARMSAINENINKVVFVGNFLRVNPISMKLLAYAMDYWSKGTQKALFLEHEVCIIGIF 159 (182)
Q Consensus 80 ~~~~~eDia~SLl~Mv~~nIg~la~l~A~~~~i~~Ivf~G~~i~~~~~~m~~i~~ai~yws~g~~~alFl~h~gyl~ga~ 159 (182)
+..++|||++++..+|..++... ..+..++++|+++|.. ..||.+.+.++ ++. +.++++++|.++. +|+
T Consensus 178 ~~~~~~di~a~~~~~v~~~l~~~---~~~~~~~~~vvl~GGv-a~n~~lr~~l~---~~~---g~~~~~p~~p~~~-~A~ 246 (276)
T 4ehu_A 178 ENAKIEDIVAGIHTSVAKRVSSL---VKRIGVQRNVVMVGGV-ARNSGIVRAMA---REI---NTEIIVPDIPQLT-GAL 246 (276)
T ss_dssp TTCCHHHHHHHHHHHHHHHHHHH---HHHHCCCSSEEEESGG-GGCHHHHHHHH---HHH---TSCEECCSSGGGH-HHH
T ss_pred ccccHHHHHHHHHHHHHHHHHHH---HHhcccCCeEEEecCc-cchHHHHHHHH---HHH---CCCeeeCCCcchH-HHH
Confidence 46789999999999999887654 5678899999999996 66788888887 444 6788999999998 454
Q ss_pred H
Q psy6720 160 D 160 (182)
Q Consensus 160 ~ 160 (182)
|
T Consensus 247 G 247 (276)
T 4ehu_A 247 G 247 (276)
T ss_dssp H
T ss_pred H
Confidence 3
No 4
>1hux_A Activator of (R)-2-hydroxyglutaryl-COA dehydratase; actin fold, metal binding protein; HET: ADP; 3.00A {Acidaminococcus fermentans} SCOP: c.55.1.5
Probab=97.76 E-value=0.00015 Score=60.73 Aligned_cols=111 Identities=12% Similarity=0.057 Sum_probs=76.3
Q ss_pred hhhHHHHHHhhcCCCCHHHHHHHHhcCCCCCCcceeccccCCCCCCcc-cccccccccccc-cccCCCHHHHHHHHHHHH
Q psy6720 18 GGTFLGLCCLLTGCNSFEEAIELATSGDNTKVDKLVRDIYGGSYERFL-GMFSFGHMNSKE-KRESVSREDLARATLVTI 95 (182)
Q Consensus 18 GGT~~GL~~LLtg~~~f~ei~~lA~~Gd~~~vDllV~DIyg~~~~~lg-iASsFGK~~~~~-~~~~~~~eDia~SLl~Mv 95 (182)
|.++.-++++| +. +++|+.++|.++.. +|+ ++ ....|.+-.... .....+++|++++++..|
T Consensus 132 G~~le~~a~~l-g~-~~~el~~la~~~~~-------------p~~-~~~~c~vfa~s~v~~l~~~g~~~~di~~av~e~V 195 (270)
T 1hux_A 132 GRFLDVMANIL-EV-KVSDLAELGAKSTK-------------RVA-ISSTCTVFAESEVISQLSKGTDKIDIIAGIHRSV 195 (270)
T ss_dssp HHHHHHHHHHH-TC-CTTTHHHHHTTCCS-------------CCC-CCCCSHHHHHHHHHHHHHTTCCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHh-CC-CHHHHHHHHhhCCC-------------CCC-cccccchhHhHHHHHHhhCCCCHHHHHHHHHHHH
Confidence 44788888877 65 79999999988741 111 22 334554422110 124578899999999999
Q ss_pred HHHHHHHHHHHHHHhCC-CEEEEEcccccccHHHHHHHHHHHHHHhcCCceEEEecCCchh
Q psy6720 96 TNNIGSIARMSAINENI-NKVVFVGNFLRVNPISMKLLAYAMDYWSKGTQKALFLEHEVCI 155 (182)
Q Consensus 96 ~~nIg~la~l~A~~~~i-~~Ivf~G~~i~~~~~~m~~i~~ai~yws~g~~~alFl~h~gyl 155 (182)
++++..+ ++..++ ++|+++|.. ..+|..++.++ +.. +.+..++++..+.
T Consensus 196 a~~i~~~----~~~~~~~~~i~~~GG~-a~n~~~~~~~~---~~l---g~~v~~p~~~~~~ 245 (270)
T 1hux_A 196 ASRVIGL----ANRVGIVKDVVMTGGV-AQNYGVRGALE---EGL---GVEIKTSPLAQYN 245 (270)
T ss_dssp HHHHHHH----HHTTCCCSSEEEESGG-GGCHHHHHHHH---HHH---CSCEECCGGGGGH
T ss_pred HHHHHHH----HhcCCCCCeEEEeCcc-ccCHHHHHHHH---HHH---CCCeEeCCCcchH
Confidence 9998433 334464 789999995 67888888888 444 4567788888886
No 5
>2w40_A Glycerol kinase, putative; closed conformation, malaria, transferase, sugar kinase/HSP70/actin superfamily, open conformation; 1.49A {Plasmodium falciparum} PDB: 2w41_A*
Probab=94.53 E-value=0.54 Score=42.11 Aligned_cols=121 Identities=16% Similarity=0.047 Sum_probs=79.9
Q ss_pred CceEecccccchhhHHHHHHhhcCCCCHHHHHHHHhcCCCCCCcceeccccCCCCCCcc---cccccccccccccccCCC
Q psy6720 7 SPLCVLLTSLGGGTFLGLCCLLTGCNSFEEAIELATSGDNTKVDKLVRDIYGGSYERFL---GMFSFGHMNSKEKRESVS 83 (182)
Q Consensus 7 ~~~rvgGs~iGGGT~~GL~~LLtg~~~f~ei~~lA~~Gd~~~vDllV~DIyg~~~~~lg---iASsFGK~~~~~~~~~~~ 83 (182)
.|--.+++..||.++-=|.+ +...++++++.++|++-...+-=+.+-+..|...|... .++-+|- ....+
T Consensus 304 ~~~~~g~~~~~g~~~~w~~~-~~~~~~~~~l~~~a~~~~~~~gl~~~P~~~G~r~P~~d~~arg~~~Gl------~~~~~ 376 (503)
T 2w40_A 304 KYALEGSIGTAGSGVSWLLK-NKLIDDPSEASDIMEKCENTTGVIFVPAFSGLYAPRWRSDARASIYGM------TFNTE 376 (503)
T ss_dssp EEEEEEEESCSHHHHHHHHH-TTSSSCGGGHHHHHHHCCSCTTCEEECCTTCBCTTTCBTTCCEEEEEE------CTTCC
T ss_pred eEEEechhhhhHhHHHHHHH-hCCcCCHHHHHHHHhhCCCCCCEEEecCCCCCCCCCCCCCCcEEEECC------CCCCC
Confidence 57777777888887766666 43345788888888653311111344455554333211 3333442 23568
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhC--C-CEEEEEcccccccHHHHHHHHHH
Q psy6720 84 REDLARATLVTITNNIGSIARMSAINEN--I-NKVVFVGNFLRVNPISMKLLAYA 135 (182)
Q Consensus 84 ~eDia~SLl~Mv~~nIg~la~l~A~~~~--i-~~Ivf~G~~i~~~~~~m~~i~~a 135 (182)
++|++++++.-|+..+-++.-...+..+ + ++|+++|.. ..|+..+++++.+
T Consensus 377 ~~~l~rAvlEgia~~~~~~~~~l~~~~g~~~~~~i~~~GG~-a~s~~~~Q~~Adv 430 (503)
T 2w40_A 377 RSHIVRALLEGIAFQLNEIVDSLTSDMGIEMLHVLRCDGGM-TKNKPFMQFNSDI 430 (503)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHTCSCCSCEEEESGG-GGCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhcCCCccceEEEeCcc-ccCHHHHHHHHHH
Confidence 9999999999999998887666554334 6 889999997 6788888999844
No 6
>3h3n_X Glycerol kinase; ATP-binding, glycerol metabolism, nucleoti binding, phosphoprotein, transferase; 1.73A {Enterococcus casseliflavus} PDB: 3h3o_O 3flc_O 3h46_X 3h45_X 3d7e_O 1r59_O 1xup_O
Probab=94.02 E-value=0.68 Score=41.64 Aligned_cols=132 Identities=16% Similarity=0.057 Sum_probs=84.4
Q ss_pred ceEecccccchhhHHHHHHhhcCCCCHHHHHHHHhcCCCCCCcceeccccCCCCCCcc---cccccccccccccccCCCH
Q psy6720 8 PLCVLLTSLGGGTFLGLCCLLTGCNSFEEAIELATSGDNTKVDKLVRDIYGGSYERFL---GMFSFGHMNSKEKRESVSR 84 (182)
Q Consensus 8 ~~rvgGs~iGGGT~~GL~~LLtg~~~f~ei~~lA~~Gd~~~vDllV~DIyg~~~~~lg---iASsFGK~~~~~~~~~~~~ 84 (182)
|---|++..+|..+.=+.+.+....+++++.++|++=...+-=+.+-...|...|-.. -++-+|- ....++
T Consensus 301 ~~~~g~~~~~G~~~~W~~~~~~~~~~~~~l~~~a~~~~~~~gl~~~P~~~Ger~P~~d~~arg~~~Gl------~~~~~~ 374 (506)
T 3h3n_X 301 YALEGSIFVAGSAIQWLRDGLRMIETSPQSEELAAKAKGDNEVYVVPAFTGLGAPYWDSEARGAVFGL------TRGTTK 374 (506)
T ss_dssp EEEEEEECCSSHHHHHHHHTSCCCSSTTHHHHHHTTCCSCSCCEEECCTTCBCTTTCBTTCCCEEECC------CTTCCH
T ss_pred EEEecchhhHHHHHHHHHHHcCCCCcHHHHHHHHhcCCCCCceEEeccccCCCCCccCCCCCEEEEcc------CCCCCH
Confidence 4444556677776655555554456899999999764332212344445554433221 3333441 124689
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHh--CCCEEEEEcccccccHHHHHHHHHHHHHHhcCCceEEEecCC
Q psy6720 85 EDLARATLVTITNNIGSIARMSAINE--NINKVVFVGNFLRVNPISMKLLAYAMDYWSKGTQKALFLEHE 152 (182)
Q Consensus 85 eDia~SLl~Mv~~nIg~la~l~A~~~--~i~~Ivf~G~~i~~~~~~m~~i~~ai~yws~g~~~alFl~h~ 152 (182)
+|++|+++.-|++.+-+.--...+.. .+++|+.+|.. ..|+..+++++.+ . ++...-++..
T Consensus 375 ~~l~RAvlEgia~~~r~~~~~l~~~~g~~~~~i~~~GGg-a~s~~~~Qi~ADv---~---g~pV~~~~~~ 437 (506)
T 3h3n_X 375 EDFVRATLQAVAYQSKDVIDTMKKDSGIDIPLLKVDGGA-AKNDLLMQFQADI---L---DIDVQRAANL 437 (506)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHCSCCCEEEEESGG-GGCHHHHHHHHHH---H---TSEEEECSSS
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCEEEEeccc-ccCHHHHHHHHHH---h---CCeEEecCCC
Confidence 99999999999999988765555443 57899999996 6788889998844 4 4554445543
No 7
>3g25_A Glycerol kinase; IDP00743, ATP-binding, glycerol metabolism, nucleotide-binding, transferase, struct genomics; HET: MSE; 1.90A {Staphylococcus aureus subsp} PDB: 3ge1_A*
Probab=93.97 E-value=0.67 Score=41.56 Aligned_cols=133 Identities=17% Similarity=0.049 Sum_probs=83.4
Q ss_pred ceEecccccchhhHHHHHHhhcCCCCHHHHHHHHhcCCCCCCcceeccccCCCCCCcc---cccccccccccccccCCCH
Q psy6720 8 PLCVLLTSLGGGTFLGLCCLLTGCNSFEEAIELATSGDNTKVDKLVRDIYGGSYERFL---GMFSFGHMNSKEKRESVSR 84 (182)
Q Consensus 8 ~~rvgGs~iGGGT~~GL~~LLtg~~~f~ei~~lA~~Gd~~~vDllV~DIyg~~~~~lg---iASsFGK~~~~~~~~~~~~ 84 (182)
|-.-|++..+|..+.=+.+.+....+++++.++|++=...+-=+.+-...|...|-.. -++-+|- ....++
T Consensus 302 ~~~~g~~~~~G~~~~W~~~~~~~~~~~~~l~~~a~~~~~~~gl~~~P~~~G~r~P~~d~~arg~~~Gl------~~~~~~ 375 (501)
T 3g25_A 302 YALEGSIFVSGSAIQWLRDGLRMINSAPQSESYATRVDSTEGVYVVPAFVGLGTPYWDSEARGAIFGL------TRGTEK 375 (501)
T ss_dssp EEEEEEESCSTHHHHHHHHTSCCCSSGGGHHHHHTTSSCCTTCEEECCTTCBCTTTCBTTCCEEEEEE------CTTCCH
T ss_pred EEEecccccHHHHHHHHHHHcCCCCcHHHHHHHHhhCCCCCeEEEecccccCCCCCCCCCCCEEEEcc------CCCCCH
Confidence 4444556667766544445554456899999999654332212334444554433221 3333342 124689
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHh--CCCEEEEEcccccccHHHHHHHHHHHHHHhcCCceEEEecCCc
Q psy6720 85 EDLARATLVTITNNIGSIARMSAINE--NINKVVFVGNFLRVNPISMKLLAYAMDYWSKGTQKALFLEHEV 153 (182)
Q Consensus 85 eDia~SLl~Mv~~nIg~la~l~A~~~--~i~~Ivf~G~~i~~~~~~m~~i~~ai~yws~g~~~alFl~h~g 153 (182)
+|++|+++.-|++.+-+.--...+.. .+++|+.+|.. ..|+..+++++. -. ++...-++...
T Consensus 376 ~~l~RAvlEgia~~~~~~~~~l~~~~g~~~~~i~~~GG~-aks~~~~Qi~Ad---v~---g~pV~~~~~~e 439 (501)
T 3g25_A 376 EHFIRATLESLCYQTRDVMEAMSKDSGIDVQSLRVDGGA-VKNNFIMQFQAD---IV---NTSVERPEIQE 439 (501)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHSSCCCSEEEEESGG-GGCHHHHHHHHH---HH---TSEEEEESCCC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhcCCCCcEEEEecch-hcCHHHHHHHHH---Hh---CCceEecCCCc
Confidence 99999999999999888766555543 57899999996 678888999884 44 45544455433
No 8
>2d4w_A Glycerol kinase; alpha and beta protein, ribonuclease H-like motif, actin- like ATPase domain, transferase; 2.30A {Cellulomonas SP}
Probab=93.73 E-value=0.73 Score=41.33 Aligned_cols=121 Identities=15% Similarity=0.042 Sum_probs=78.2
Q ss_pred CceEecccccchhhHHHHHHhhcCCCCHHHHHHHHhcCCCCCCc-ceeccccCCCCCCcc---cccccccccccccccCC
Q psy6720 7 SPLCVLLTSLGGGTFLGLCCLLTGCNSFEEAIELATSGDNTKVD-KLVRDIYGGSYERFL---GMFSFGHMNSKEKRESV 82 (182)
Q Consensus 7 ~~~rvgGs~iGGGT~~GL~~LLtg~~~f~ei~~lA~~Gd~~~vD-llV~DIyg~~~~~lg---iASsFGK~~~~~~~~~~ 82 (182)
.|-.-|++..||.++-=|...+....+++++.++|++=...+ . +.+-+..|...|... .++-+|- ....
T Consensus 300 ~~~~~g~~~~~G~~~~W~~~~~~~~~~~~~l~~~a~~~~~~~-gl~~~P~~~G~r~P~~d~~arg~~~Gl------~~~~ 372 (504)
T 2d4w_A 300 VYALEGSIAVTGSLVQWLRDNLGMFEDAPDVEWLAGKVQDNG-GAYFVPAFSGLFAPYWRPDARGALVGL------TRYV 372 (504)
T ss_dssp EEEEEEEESCSHHHHHHHHHTTCTTTTCSCTHHHHTTSSSCT-TCEEECTTCCCSTTTCCCCSCEEEEEE------CSSC
T ss_pred eEEEcchhhhHHHHHHHHHHHhCCCCCHHHHHHHHhhCCCCC-CEEEecCCCCCCCCCCCCCCCEEEEeC------CCCC
Confidence 566677777777776545444433456778888886532111 1 344555554433211 3333442 2346
Q ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHh--CCCEEEEEcccccccHHHHHHHHHH
Q psy6720 83 SREDLARATLVTITNNIGSIARMSAINE--NINKVVFVGNFLRVNPISMKLLAYA 135 (182)
Q Consensus 83 ~~eDia~SLl~Mv~~nIg~la~l~A~~~--~i~~Ivf~G~~i~~~~~~m~~i~~a 135 (182)
+++|++++++.-|+..+-+.--...+.. .+++|+.+|.. ..|+..|++++.+
T Consensus 373 ~~~~l~rAvlEgia~~~~~~~~~l~~~~g~~~~~i~~~GG~-a~s~~~~Qi~Adv 426 (504)
T 2d4w_A 373 NRNHIARAALEATAFQSREVVDAMNADSGVDLTELRVDGGM-VANELLMQFQADQ 426 (504)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHHHHSCCCCEEEEESGG-GGCHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCcceEEEeCCc-ccCHHHHHHHHHH
Confidence 8999999999999999887766554433 47899999997 6788888998844
No 9
>2p3r_A Glycerol kinase; glycerol metabolism, allosteric regulation, microfluidics,; 2.00A {Escherichia coli} PDB: 3ezw_A 1gla_G 1bo5_O* 1bot_O 1glb_G* 1glc_G* 1gld_G* 1gle_G* 1glf_O* 1bu6_O 1bwf_Y* 1glj_Y* 1gll_Y*
Probab=93.58 E-value=0.64 Score=41.91 Aligned_cols=134 Identities=16% Similarity=0.039 Sum_probs=84.8
Q ss_pred CceEecccccchhhHHHHHHhhcCCCCHHHHHHHHhcCCCCCCcceeccccCCCCCCcc---cccccccccccccccCCC
Q psy6720 7 SPLCVLLTSLGGGTFLGLCCLLTGCNSFEEAIELATSGDNTKVDKLVRDIYGGSYERFL---GMFSFGHMNSKEKRESVS 83 (182)
Q Consensus 7 ~~~rvgGs~iGGGT~~GL~~LLtg~~~f~ei~~lA~~Gd~~~vDllV~DIyg~~~~~lg---iASsFGK~~~~~~~~~~~ 83 (182)
.|---|++..+|..+.=+.+.+....+++++.++|++=...+-=+.+-...|...|... .++-+|- ....+
T Consensus 298 ~~~~~g~~~~~G~~~~W~~~~~~~~~~~~~l~~~a~~~~~~~gl~~~P~~~G~r~P~~d~~arg~~~Gl------~~~~~ 371 (510)
T 2p3r_A 298 NYALEGAVFMAGASIQWLRDEMKLINDAYDSEYFATKVQNTNGVYVVPAFTGLGAPYWDPYARGAIFGL------TRGVN 371 (510)
T ss_dssp EEEEEEEESCSHHHHHHHHHTSCCCCSSSCHHHHHTTSSSCTTCEEECCTTCCBTTTCCTTCCEEEEEE------CTTCC
T ss_pred eEEEccchhhHHHHHHHHHHHccCCCcHHHHHHHHhhCCCCCceEEeCcccCCCCCCCCCCCCEEEECC------CCCCC
Confidence 45555667777776655555554445788888888653211111344555554333211 3344442 12468
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHH--hCCCEEEEEcccccccHHHHHHHHHHHHHHhcCCceEEEecCCc
Q psy6720 84 REDLARATLVTITNNIGSIARMSAIN--ENINKVVFVGNFLRVNPISMKLLAYAMDYWSKGTQKALFLEHEV 153 (182)
Q Consensus 84 ~eDia~SLl~Mv~~nIg~la~l~A~~--~~i~~Ivf~G~~i~~~~~~m~~i~~ai~yws~g~~~alFl~h~g 153 (182)
++|++|+++.-|++.+-++--...+. ..+++|+.+|.. ..|+..|++++.+ . ++...-++...
T Consensus 372 ~~~l~RAvlEgia~~~r~~~~~l~~~~g~~~~~i~~~GGg-a~s~~~~Qi~ADv---~---g~pV~~~~~~e 436 (510)
T 2p3r_A 372 ANHIIRATLESIAYQTRDVLEAMQADSGIRLHALRVDGGA-VANNFLMQFQSDI---L---GTRVERPEVRE 436 (510)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCSEEEEESGG-GGCHHHHHHHHHH---H---TSEEEEESCCC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhcCCCccEEEEeCch-hcCHHHHHHHHHH---h---CCceEecCCCC
Confidence 99999999999999998876555554 457899999996 6788888988844 4 44544455433
No 10
>2zf5_O Glycerol kinase; hyperthermophilic archaeon, ATP-binding, GL metabolism, nucleotide-binding, transferase; 2.40A {Thermococcus kodakarensis}
Probab=93.53 E-value=1.1 Score=40.12 Aligned_cols=133 Identities=20% Similarity=0.065 Sum_probs=81.1
Q ss_pred CceEecccccchhhHHHHHHhhcCCCCHHHHHHHHhcCCCCCCc-ceeccccCCCCCCcc---cccccccccccccccCC
Q psy6720 7 SPLCVLLTSLGGGTFLGLCCLLTGCNSFEEAIELATSGDNTKVD-KLVRDIYGGSYERFL---GMFSFGHMNSKEKRESV 82 (182)
Q Consensus 7 ~~~rvgGs~iGGGT~~GL~~LLtg~~~f~ei~~lA~~Gd~~~vD-llV~DIyg~~~~~lg---iASsFGK~~~~~~~~~~ 82 (182)
.|-..+++..||.++-=+...+....+++++.++|++=...+ . +.+-+..|...|... .++-+|- ....
T Consensus 292 ~~~~~g~~~~~G~~~~w~~~~~~~~~~~~~l~~~a~~~~~~~-gl~~~P~~~G~r~P~~d~~arg~~~Gl------~~~~ 364 (497)
T 2zf5_O 292 SYALEGSIFVTGAAVQWLRDGIKIIKHASETEELATKLESNE-GVYFVPAFVGLGAPYWDQFARGIIIGI------TRGT 364 (497)
T ss_dssp EEEEEEEESCSHHHHHHHHHTSCCCSCGGGHHHHHTTSSSCT-TCEEECCTTCBCTTTCBTTCCEEEEEE------CTTC
T ss_pred EEEEechhhhHHHHHHHHHHHhCCCCcHHHHHHHHhhCCCCC-ceEEecCcCCCCCCCCCCCCCEEEEeC------CCCC
Confidence 455666777777776544444433457888888886432111 2 344455554333211 3333342 2356
Q ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEEEcccccccHHHHHHHHHHHHHHhcCCceEEEecCCc
Q psy6720 83 SREDLARATLVTITNNIGSIARMSAINENINKVVFVGNFLRVNPISMKLLAYAMDYWSKGTQKALFLEHEV 153 (182)
Q Consensus 83 ~~eDia~SLl~Mv~~nIg~la~l~A~~~~i~~Ivf~G~~i~~~~~~m~~i~~ai~yws~g~~~alFl~h~g 153 (182)
+++|++++++.-|+..+-++--...+.-.+++|+.+|.. ..|+..++.++. -. ++...-+++..
T Consensus 365 ~~~~l~rAvlEgia~~~~~~l~~l~~~~~~~~i~~~GG~-a~s~~~~Qi~Ad---v~---g~pV~~~~~~e 428 (497)
T 2zf5_O 365 GREHLARATLEAIAYLTRDVVDEMEKLVQIKELRVDGGA-TANDFLMQFQAD---IL---NRKVIRPVVKE 428 (497)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHTTTSCCCCEEEESGG-GGCHHHHHHHHH---HH---TSCEEEESCSC
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHhcCCcceEEEeCcc-ccCHHHHHHHHh---hc---CCeEEEcCCCc
Confidence 899999999999988876554333211157899999997 678888899884 44 45544555544
No 11
>2ivn_A O-sialoglycoprotein endopeptidase; UP1 keops complex, Fe/Zn dependent nucleotide phosphatase, metalloprotease, hypothetical protein, zinc; HET: ANP; 1.65A {Pyrococcus abyssi} PDB: 2ivo_A 2ivp_A*
Probab=93.15 E-value=0.61 Score=39.79 Aligned_cols=133 Identities=17% Similarity=0.106 Sum_probs=79.7
Q ss_pred CCCCceEecccc-cchhhHHHHHHhhcCCCC--HHHHHHHHhcCCCC-CCcceeccccCCCCCCccccccccccccc---
Q psy6720 4 PNLSPLCVLLTS-LGGGTFLGLCCLLTGCNS--FEEAIELATSGDNT-KVDKLVRDIYGGSYERFLGMFSFGHMNSK--- 76 (182)
Q Consensus 4 ~~~~~~rvgGs~-iGGGT~~GL~~LLtg~~~--f~ei~~lA~~Gd~~-~vDllV~DIyg~~~~~lgiASsFGK~~~~--- 76 (182)
..++++.+|.|. .+-|=++--...++|... --++.++|.+|+.. .....+++ .. -+|..+.+.
T Consensus 139 ~~~~~~~lg~t~dds~Gr~fD~vA~~LGl~~~~~~~le~lA~~g~~~~~~p~~i~~---~~-------fsfs~l~~~v~~ 208 (330)
T 2ivn_A 139 EGGRYRVFGETLDIGIGNAIDVFARELGLGFPGGPKVEKLAEKGEKYIELPYAVKG---MD-------LSFSGLLTEAIR 208 (330)
T ss_dssp ETTEEEEEEEBSSSCHHHHHHHHHHHHTCCSCHHHHHHHHHHTCCSCCCCCCCEET---TE-------ECCHHHHHHHHH
T ss_pred cCCeEEEEEeecCchhHHHHHHHHHHhCCCCCcHHHHHHHhhcCCCcCCCCcccCC---Ce-------EehHHHHHHHHH
Confidence 356788887653 222333333333335442 24788899988741 11122221 11 122211110
Q ss_pred -ccccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEEEcccccccHHHHHHHHHHHHHHhcCCceEEEec
Q psy6720 77 -EKRESVSREDLARATLVTITNNIGSIARMSAINENINKVVFVGNFLRVNPISMKLLAYAMDYWSKGTQKALFLE 150 (182)
Q Consensus 77 -~~~~~~~~eDia~SLl~Mv~~nIg~la~l~A~~~~i~~Ivf~G~~i~~~~~~m~~i~~ai~yws~g~~~alFl~ 150 (182)
-.+.+.+++|||+++...+.+.+..++...++.+++++|+++|.... |..+.+.+...+... ..+.++++
T Consensus 209 ~~~~g~~~~~diAa~fq~~l~~~l~~~~~~~~~~~~~~~vvlsGGVa~-N~~l~~~l~~~l~~~---g~~v~~p~ 279 (330)
T 2ivn_A 209 KYRSGKYRVEDLAYSFQETAFAALVEVTERAVAHTEKDEVVLVGGVAA-NNRLREMLRIMTEDR---GIKFFVPP 279 (330)
T ss_dssp HHHHTCSCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCSEEEEESGGGG-CHHHHHHHHHHHHHH---TCEEECCC
T ss_pred HHHcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCeEEEEccHHH-HHHHHHHHHHHHHHc---CCEEEecC
Confidence 00112578999999999999999999999999999999999999755 555556666443322 46665544
No 12
>3vth_A Hydrogenase maturation factor; carbamoyltransfer, maturation of [NIFE]-hydrogenase, carbamoylphosphate, iron, HYPE; HET: APC AP2; 2.00A {Thermoanaerobacter tengcongensis} PDB: 3vti_A
Probab=92.61 E-value=0.62 Score=44.92 Aligned_cols=66 Identities=18% Similarity=0.139 Sum_probs=54.8
Q ss_pred CCCHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEEEcccccccHHHHHHHHHHHHHHhcCCceEEEec
Q psy6720 81 SVSREDLARATLVTITNNIGSIARMSAINENINKVVFVGNFLRVNPISMKLLAYAMDYWSKGTQKALFLE 150 (182)
Q Consensus 81 ~~~~eDia~SLl~Mv~~nIg~la~l~A~~~~i~~Ivf~G~~i~~~~~~m~~i~~ai~yws~g~~~alFl~ 150 (182)
...++|||++....+...+..++..+++.+++++|+++|... .|..+.+.+. +...+.+++.++++
T Consensus 663 g~~~~dIAasFq~ala~~L~~~~~~a~~~~g~~~VvLsGGVa-~N~~Lr~~L~---~~l~~~g~~v~~p~ 728 (761)
T 3vth_A 663 GFEKSYISAKFHNTVVNFTYDLANLIRKETGINKVVLSGGSF-QNRYLLRRLI---EKLSLSGFEVYSNS 728 (761)
T ss_dssp TCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEESGGG-GSHHHHHHHH---HHHHHTTCEEEECS
T ss_pred CCCHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEEECcHH-HHHHHHHHHH---HHHHhCCCEEEecC
Confidence 467899999999999999999999999999999999999975 4555656666 34455678887766
No 13
>3eno_A Putative O-sialoglycoprotein endopeptidase; hydrolase, metal-binding, metalloprotease, protease, zinc, keops complex, ATPase, metal ION binding; 3.02A {Thermoplasma acidophilum}
Probab=92.59 E-value=0.73 Score=39.65 Aligned_cols=139 Identities=12% Similarity=0.016 Sum_probs=81.6
Q ss_pred cCCCCceEeccc-ccchhhHHHHHHhhcCCCCH--HHHHHHHhcCCCCCCcceeccccCCCCCCcccccccccccccccc
Q psy6720 3 IPNLSPLCVLLT-SLGGGTFLGLCCLLTGCNSF--EEAIELATSGDNTKVDKLVRDIYGGSYERFLGMFSFGHMNSKEKR 79 (182)
Q Consensus 3 ~~~~~~~rvgGs-~iGGGT~~GL~~LLtg~~~f--~ei~~lA~~Gd~~~vDllV~DIyg~~~~~lgiASsFGK~~~~~~~ 79 (182)
+..++|++++.| ...=|-++-=...++|..-+ -++..+|.+|+. .+++-.. +-+.+..--++-+. +... ..
T Consensus 144 ~~~~~~~~lg~t~d~S~G~~fD~vA~~LGl~y~g~~~le~lA~~g~~-~~~~~~~-~~~~~~sfsgl~~~---v~~~-l~ 217 (334)
T 3eno_A 144 HVNGRYRVLGETLDIGIGNMIDKFAREAGIPFPGGPEIEKLAMKGTK-LLDLPYS-VKGMDTAFSGILTA---ALQY-LK 217 (334)
T ss_dssp ECSSBEEEEEEBSSCCHHHHHHHHHTTTTCCSCHHHHHHTTGGGCCS-CCCCCCC-EETTEECCHHHHHH---HHHH-HH
T ss_pred EeCCEEEEeccCCCccHHHHHHHHHHHcCCCCCCHHHHHHHHhcCCC-CCCCcee-ccCceEchHHHHHH---HHHH-HH
Confidence 345778888775 22233333333333355421 367788888874 2222100 00111100011000 0000 01
Q ss_pred cCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEEEcccccccHHHHHHHHHHHHHHhcCCceEEEecC
Q psy6720 80 ESVSREDLARATLVTITNNIGSIARMSAINENINKVVFVGNFLRVNPISMKLLAYAMDYWSKGTQKALFLEH 151 (182)
Q Consensus 80 ~~~~~eDia~SLl~Mv~~nIg~la~l~A~~~~i~~Ivf~G~~i~~~~~~m~~i~~ai~yws~g~~~alFl~h 151 (182)
+...++|+|++....+.+.+..++...++.+++++|+++|-.. .|..+.+.+.....+. +++.++++.
T Consensus 218 ~g~~~~diAasfq~~l~~~l~~~~~~a~~~~g~~~vvlsGGVa-~N~~L~~~L~~~l~~~---g~~v~~p~~ 285 (334)
T 3eno_A 218 TGQAIEDISYSIQETAFAMLVEVLERALYVSGKDEILMAGGVA-LNRRLRDMVTNMAREA---GIRSYLTDR 285 (334)
T ss_dssp TTCCHHHHHHHHHHHHHHHHHHHHHHHHHHHTCSEEEEESSGG-GCHHHHHHHHHHHHHH---TSEEECCCT
T ss_pred cCCCHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCeEEEcCCHH-HHHHHHHHHHHHHHHc---CCEEEecCC
Confidence 2357999999999999999999999999999999999999974 5556666666554444 677666544
No 14
>3i8b_A Xylulose kinase; strain ATCC 15703 / DSM 20083, 11200J,, transferase, structural genomics, PSI-2; 2.00A {Bifidobacterium adolescentis ATCC15703}
Probab=92.43 E-value=3.1 Score=37.55 Aligned_cols=123 Identities=17% Similarity=0.099 Sum_probs=80.9
Q ss_pred CCCceEecccccchhhHHHHHHhhcCCCCHHHHHHHHhcCCCCCCc-ceeccccCCCCCCcc--cccccccccccccccC
Q psy6720 5 NLSPLCVLLTSLGGGTFLGLCCLLTGCNSFEEAIELATSGDNTKVD-KLVRDIYGGSYERFL--GMFSFGHMNSKEKRES 81 (182)
Q Consensus 5 ~~~~~rvgGs~iGGGT~~GL~~LLtg~~~f~ei~~lA~~Gd~~~vD-llV~DIyg~~~~~lg--iASsFGK~~~~~~~~~ 81 (182)
.+.|-..+++..||..+.=+.+.+ +. +++++.++|++=....-. +.+-...|...|..+ .++-+|-- ...
T Consensus 321 ~g~~~~~~~~~~gg~~l~w~~~~~-~~-~~~~l~~~a~~~~~g~~gl~~lP~~~Ger~P~~~~arg~~~Gl~-----~~~ 393 (515)
T 3i8b_A 321 TGHYLPLACTINGSRILDAGRAAL-GV-DYDELAKLAFASKPGANGITLVPYFDGERTPNRPNATATFSGMT-----LAN 393 (515)
T ss_dssp SSSEEEEEEESCSTHHHHHHHHHH-TC-CHHHHHHHHHHSCTTGGGCEEECCTTCBTTTTBTTCCCEEESCC-----TTT
T ss_pred CCCEEEeeecccHHHHHHHHHHHh-CC-CHHHHHHHHHhCCCCCCCeEEecCCCCCcCCCCcCcceEEecCC-----CCC
Confidence 455677777888888876666655 43 799999999764332222 344455555444222 33333411 123
Q ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHH-HhCCCEEEEEcccccccHHHHHHHHHH
Q psy6720 82 VSREDLARATLVTITNNIGSIARMSAI-NENINKVVFVGNFLRVNPISMKLLAYA 135 (182)
Q Consensus 82 ~~~eDia~SLl~Mv~~nIg~la~l~A~-~~~i~~Ivf~G~~i~~~~~~m~~i~~a 135 (182)
.+++|++|+++.-|+..+-++--...+ -..+++|+++|.. ..|+..+++++.+
T Consensus 394 ~~~~~l~RAvlEgia~~~r~~l~~l~~~g~~~~~i~~~GGg-aks~~~~Qi~ADv 447 (515)
T 3i8b_A 394 TTRENLARAFVEGLLCSQRDCLELIRSLGASITRILLIGGG-AKSEAIRTLAPSI 447 (515)
T ss_dssp CSHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCEEEEESGG-GGCHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCCEEEEECch-hcCHHHHHHHHHH
Confidence 489999999999999988776543333 2346899999997 5789899998844
No 15
>2dpn_A Glycerol kinase; thermus thermophilus HB8, structural genomics, NPPSFA, national project on protein structural and functional analyses; 2.80A {Thermus thermophilus}
Probab=92.31 E-value=1 Score=40.21 Aligned_cols=121 Identities=17% Similarity=0.042 Sum_probs=76.7
Q ss_pred CceEecccccchhhHHHHHHhhcCCCCHHHHHHHHhcCCCCCCcceeccccCCCCCCcc---cccccccccccccccCCC
Q psy6720 7 SPLCVLLTSLGGGTFLGLCCLLTGCNSFEEAIELATSGDNTKVDKLVRDIYGGSYERFL---GMFSFGHMNSKEKRESVS 83 (182)
Q Consensus 7 ~~~rvgGs~iGGGT~~GL~~LLtg~~~f~ei~~lA~~Gd~~~vDllV~DIyg~~~~~lg---iASsFGK~~~~~~~~~~~ 83 (182)
.|.--|++..||.++-=|.+ +....+++++.++|++=...+-=+.+-+..|...|... .++-+|- ....+
T Consensus 296 ~~~~~g~~~~~g~~~~w~~~-~~~~~~~~~l~~~a~~~~~~~gl~~~P~~~G~r~P~~d~~arg~~~Gl------~~~~~ 368 (495)
T 2dpn_A 296 TYALEGSLFVAGAAVGWLKE-VGLIRESAEVEALAASVEDTGDVYFVPAFTGLGAPYWDPYARGTLLGL------TRGTS 368 (495)
T ss_dssp EEEEEEEESCSHHHHHHHHH-TTSSSSTTTHHHHHHTCSCCSSCEEECCTTCBCTTTCBTTCCEEEEEE------CTTCC
T ss_pred EEEEechHHhHHHHHHHHHH-cCCccCHHHHHHHHhhCCCCCcEEEecCCCCCCCCCCCCCCceEEEec------CCCCC
Confidence 45556677777777654555 43335678888888653211111344555554433221 3333442 23468
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHH--hCCCEEEEEcccccccHHHHHHHHHH
Q psy6720 84 REDLARATLVTITNNIGSIARMSAIN--ENINKVVFVGNFLRVNPISMKLLAYA 135 (182)
Q Consensus 84 ~eDia~SLl~Mv~~nIg~la~l~A~~--~~i~~Ivf~G~~i~~~~~~m~~i~~a 135 (182)
++|++++++.-|+..+-++.-...+. ..+++|+++|.. ..|+..+++++.+
T Consensus 369 ~~~~~rAvlEgia~~~~~~~~~l~~~~g~~~~~i~~~GG~-a~n~~~~q~~Adv 421 (495)
T 2dpn_A 369 RAHLARAALEGVAFQVRDVVLAMEEEAGVRLKVLKADGGM-AQNRLFLKIQADL 421 (495)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHTTTSCCCCCEEEESGG-GGCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCcEEEEeccc-ccCHHHHHHHHHH
Confidence 99999999999999888776655443 346799999986 6788888998854
No 16
>4g9i_A Hydrogenase maturation protein HYPF; zinc finger, ATP binding, carbamoyla transferase; 4.50A {Thermococcus kodakarensis}
Probab=92.06 E-value=0.3 Score=47.05 Aligned_cols=94 Identities=12% Similarity=0.165 Sum_probs=66.7
Q ss_pred CCCHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEEEcccccccHHHHHHHHHHHHHHhcCCceEEEec----CCchhh
Q psy6720 81 SVSREDLARATLVTITNNIGSIARMSAINENINKVVFVGNFLRVNPISMKLLAYAMDYWSKGTQKALFLE----HEVCII 156 (182)
Q Consensus 81 ~~~~eDia~SLl~Mv~~nIg~la~l~A~~~~i~~Ivf~G~~i~~~~~~m~~i~~ai~yws~g~~~alFl~----h~gyl~ 156 (182)
...++|||++....+.+.+..++..+++.+++++|+++|....| ..+.+.+. +.....+++.++++ ++|=+
T Consensus 675 ~~~~~dIAasfQ~al~~~L~~~~~~a~~~tg~~~VvLSGGVa~N-~~L~~~l~---~~L~~~G~~v~~p~~vP~nDgGi- 749 (772)
T 4g9i_A 675 GASPADIAYSAHLALARAFAHTAVERAREFGVKNVALSGGVAYN-ELITKMIR---KVVEANGLNFHVTTEVPRGDNGV- 749 (772)
T ss_dssp TSCHHHHHHHHHHHHHHHHHHHHHHHHHTTTCSCCCEESSTTCC-HHHHHHHH---HHGGGSSCCCCCCTTSCSSGGGH-
T ss_pred CCCHHHHHHHHHHHHHHHHHHHHHHHHHHhCcCEEEEEchHHHH-HHHHHHHH---HHHHHCCCEEEccCCCCCCcchH-
Confidence 45789999999999999999999999999999999999998554 45555555 45666778876654 34444
Q ss_pred hhhHHhhcCCCcccCCCCCCcccc
Q psy6720 157 GIFDHWTSHPAFIDSYKPGVDFIL 180 (182)
Q Consensus 157 ga~~a~~~~~~~~~~~~~~~~~~~ 180 (182)
+++.||.. -.+...+....|.+|
T Consensus 750 ALGQA~iA-~~~L~~~l~~~Dl~l 772 (772)
T 4g9i_A 750 NVGQAFLG-GLYLEGYLTKEDLML 772 (772)
T ss_dssp HHHHHHHH-HHHHHTSSCTTTTTC
T ss_pred HHHHHHHH-HHHHhccCchhhhcC
Confidence 33333322 112556666677654
No 17
>3hz6_A Xylulokinase; xylulose, structural genomic, chromob violaceum, manolate, transferase, structural genomi 2; HET: ADP XUL; 1.65A {Chromobacterium violaceum} PDB: 3kzb_A*
Probab=92.06 E-value=1.1 Score=40.24 Aligned_cols=121 Identities=14% Similarity=0.071 Sum_probs=77.5
Q ss_pred CceEecccccchhhHHHHHHhhc--CCCCHHHHHHHHhc---C-CCCCCcceeccccCCCCCCcc---cccccccccccc
Q psy6720 7 SPLCVLLTSLGGGTFLGLCCLLT--GCNSFEEAIELATS---G-DNTKVDKLVRDIYGGSYERFL---GMFSFGHMNSKE 77 (182)
Q Consensus 7 ~~~rvgGs~iGGGT~~GL~~LLt--g~~~f~ei~~lA~~---G-d~~~vDllV~DIyg~~~~~lg---iASsFGK~~~~~ 77 (182)
.+--+|++..||.++-=+.+.+. ...+++++.++|++ | +..+-=+.+-...|...|-.. -++-+|-
T Consensus 296 ~~~~~g~~~~~G~~~~W~~~~~~~~~~~~~~~l~~~a~~~~~g~~~~~gl~~~P~~~Ger~P~~d~~arg~~~Gl----- 370 (511)
T 3hz6_A 296 KTLQVAPVLNAGNILQWALTLVGHRPGEDCAEYFHMAAAEVQGVTVPDGLLFVPYLHAERCPVELPAPRGALLGV----- 370 (511)
T ss_dssp EEEEEEEESSSHHHHHHHGGGGTCCTTSCSHHHHHHHHHHHTTCCCCTTCEEEEESSCBCSSSCBSSCEEEEECC-----
T ss_pred ceEEEeehhhHHHHHHHHHHHhcccccccHHHHHHHHHhCCCCCCCCCCEEEeCCCCCCCCCCCCCccceEEEcC-----
Confidence 34445666777777655666665 45689999988864 3 101111344444454433221 3333441
Q ss_pred cccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEEEcccccccHHHHHHHHHH
Q psy6720 78 KRESVSREDLARATLVTITNNIGSIARMSAINENINKVVFVGNFLRVNPISMKLLAYA 135 (182)
Q Consensus 78 ~~~~~~~eDia~SLl~Mv~~nIg~la~l~A~~~~i~~Ivf~G~~i~~~~~~m~~i~~a 135 (182)
....+++|++|+++.-|+..+-+.--...+-. +++|+.+|.. ..|+..+++++.+
T Consensus 371 -~~~~~~~~l~RAvlEgia~~~~~~~~~l~~g~-~~~i~~~GGg-a~s~~~~Qi~ADv 425 (511)
T 3hz6_A 371 -TGATTRAQILLAVLEGAALSLRWCAELLGMEK-VGLLKVVGGG-ARSEAWLRMIADN 425 (511)
T ss_dssp -CTTCCHHHHHHHHHHHHHHHHHHHHHHHTGGG-CCEEEEESGG-GGCHHHHHHHHHH
T ss_pred -CCCCCHHHHHHHHHHHHHHHHHHHHHHHhcCC-CCEEEEeCch-hcCHHHHHHHHHH
Confidence 13468999999999999998877654433333 8999999997 6788889998844
No 18
>4e1j_A Glycerol kinase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, transferase; 2.33A {Sinorhizobium meliloti}
Probab=91.21 E-value=1.8 Score=39.17 Aligned_cols=121 Identities=17% Similarity=0.060 Sum_probs=72.2
Q ss_pred ceEecccccchhhHHHHHHhhcCCCCHHHHHHHHhcCCCCCCcceeccccCCCCCCcc---cccccccccccccccCCCH
Q psy6720 8 PLCVLLTSLGGGTFLGLCCLLTGCNSFEEAIELATSGDNTKVDKLVRDIYGGSYERFL---GMFSFGHMNSKEKRESVSR 84 (182)
Q Consensus 8 ~~rvgGs~iGGGT~~GL~~LLtg~~~f~ei~~lA~~Gd~~~vDllV~DIyg~~~~~lg---iASsFGK~~~~~~~~~~~~ 84 (182)
|.--|++..+|..+.=+.+.+....+++++.++|++=.-.+-=+.+-...|...|-.. .++-+|-- ...++
T Consensus 321 ~~~~g~~~~~G~~~~W~~~~~~~~~~~~~l~~~a~~~~~~~gl~~lP~l~Ger~P~~d~~arg~~~Gl~------~~~~~ 394 (520)
T 4e1j_A 321 YALEGSIFVAGAAVQWLRDGLKVIKAAPDTGSLAESADPSQEVYLVPAFTGLGAPHWDPDARGAIFGMT------RNTGP 394 (520)
T ss_dssp EEEEEEESCSHHHHHHHHHTTCCC-----CHHHHHTSCTTCCCEEECCTTCBCTTTCBTTCCCEEEEEC------TTCCH
T ss_pred EEEcchHhhHHHHHHHHHHHcCCcccHHHHHHHHhcCCCCCcEEEEcCccCCCCCCCCCCCCEEEeccc------CCCCH
Confidence 4444556677776665666665456788998888653322212344555554433221 33444421 24689
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHH----hCCCEEEEEcccccccHHHHHHHHHH
Q psy6720 85 EDLARATLVTITNNIGSIARMSAIN----ENINKVVFVGNFLRVNPISMKLLAYA 135 (182)
Q Consensus 85 eDia~SLl~Mv~~nIg~la~l~A~~----~~i~~Ivf~G~~i~~~~~~m~~i~~a 135 (182)
+|++|+++.-|++.+-++--...+. -.+++|+.+|.. ..++..+++++.+
T Consensus 395 ~~l~RAvlEgia~~~r~~l~~l~~~~~~~g~~~~i~~~GGg-aks~~~~Qi~ADv 448 (520)
T 4e1j_A 395 AEFARAALEAVCYQTRDLLEAMHKDWRRNGNDTVLRVDGGM-VASDWTMQRLSDL 448 (520)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHCC-----CCEEEESGG-GGCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhccCCCcceEEEeCcc-ccCHHHHHHHHHH
Confidence 9999999999999888765444332 268899999997 6789999998843
No 19
>2itm_A Xylulose kinase, xylulokinase; ATPase, FGGY kinase, transferase; HET: XUL; 2.10A {Escherichia coli} PDB: 2nlx_A
Probab=90.43 E-value=8.9 Score=33.88 Aligned_cols=135 Identities=13% Similarity=0.021 Sum_probs=81.5
Q ss_pred CCceEecccccchhhHHHHHHhhcCCCCHHHHHHHHhcCCCCCCc-ceeccccCCCCCCcc---cccccccccccccccC
Q psy6720 6 LSPLCVLLTSLGGGTFLGLCCLLTGCNSFEEAIELATSGDNTKVD-KLVRDIYGGSYERFL---GMFSFGHMNSKEKRES 81 (182)
Q Consensus 6 ~~~~rvgGs~iGGGT~~GL~~LLtg~~~f~ei~~lA~~Gd~~~vD-llV~DIyg~~~~~lg---iASsFGK~~~~~~~~~ 81 (182)
+.|--.+++..||.++.=+...+ +..+++++.+++.+-....=+ +.+....|...|... .++-+|- ...
T Consensus 283 g~~~~~~~~~~~G~~~~W~~~~~-~~~~~~~~~~~a~~~~~~~~gl~~lP~~~G~r~P~~~~~a~g~~~Gl------~~~ 355 (484)
T 2itm_A 283 QRWHLMSVMLSAASCLDWAAKLT-GLSNVPALIAAAQQADESAEPVWFLPYLSGERTPHNNPQAKGVFFGL------THQ 355 (484)
T ss_dssp TCEEEEEEECCHHHHHHHHHHHT-TCCSHHHHHHHGGGCCTTSCCCEEEEEEC--------CCEEEEEEEE------ETT
T ss_pred CeeeeeehhhhHHHHHHHHHHhc-CcccHHHHHHHHhcCCCCCCCeEEeCCCCCCCCCCCCCCCceEEEcC------CCC
Confidence 35655666666666664444443 666899998888653322222 344445554333211 3343441 235
Q ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHH-HhCCCEEEEEcccccccHHHHHHHHHHHHHHhcCCceEEEecCCch
Q psy6720 82 VSREDLARATLVTITNNIGSIARMSAI-NENINKVVFVGNFLRVNPISMKLLAYAMDYWSKGTQKALFLEHEVC 154 (182)
Q Consensus 82 ~~~eDia~SLl~Mv~~nIg~la~l~A~-~~~i~~Ivf~G~~i~~~~~~m~~i~~ai~yws~g~~~alFl~h~gy 154 (182)
.+++|++++++.-|+..+-++--...+ ...+++|+.+|.. ..|+..++.++. -. ++...-++++..
T Consensus 356 ~~~~~~~rAvlEgia~~~~~~~~~l~~~g~~~~~i~~~GG~-a~s~~~~Qi~Ad---v~---g~pV~~~~~~e~ 422 (484)
T 2itm_A 356 HGPNELARAVLEGVGYALADGMDVVHACGIKPQSVTLIGGG-ARSEYWRQMLAD---IS---GQQLDYRTGGDV 422 (484)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHHHHHTTTCCCSCEEEESGG-GCCHHHHHHHHH---HH---CCCEEEESCTTS
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcceEEEEecc-ccCHHHHHHHHH---Hh---CCeEEeCCCCCc
Confidence 689999999999999988765544332 2347899999998 578888899884 44 455556666554
No 20
>3ifr_A Carbohydrate kinase, FGGY; xylulose kinase, SGX, structural GENO 11200H, transferase, PSI-2; 2.30A {Rhodospirillum rubrum}
Probab=89.07 E-value=9.5 Score=34.14 Aligned_cols=133 Identities=13% Similarity=-0.035 Sum_probs=84.1
Q ss_pred CCceEecccccchhhHHHHHHhhc--CCC-CHHHHHHHHhcCCCCCCcc-eeccccCCCCCCc---cccccccccccccc
Q psy6720 6 LSPLCVLLTSLGGGTFLGLCCLLT--GCN-SFEEAIELATSGDNTKVDK-LVRDIYGGSYERF---LGMFSFGHMNSKEK 78 (182)
Q Consensus 6 ~~~~rvgGs~iGGGT~~GL~~LLt--g~~-~f~ei~~lA~~Gd~~~vDl-lV~DIyg~~~~~l---giASsFGK~~~~~~ 78 (182)
+.|--.+++.-||..+-=+.+.+. +.+ +++++.++|++-....-++ .+-...|...|-. ..++-+|-
T Consensus 293 g~~~~~g~~~~~G~~~~W~~~~~~~~~~~~~~~~l~~~a~~~~~~~~gl~flP~~~Ger~P~~d~~arg~~~Gl------ 366 (508)
T 3ifr_A 293 GLYAPNGCMAATGSALNWLAKLLAPEAGEAAHAQLDALAAEVPAGADGLVCLPYFLGEKTPIHDPFASGTFTGL------ 366 (508)
T ss_dssp TCBCCEEEESSSHHHHHHHHHHHSTTCTTHHHHHHHHHHHTSCTTGGGCEEECCTTCCC----CCCCCCEEESC------
T ss_pred CceEEechhhhhHHHHHHHHHHHhhcCCCCCHHHHHHHHhcCCCCCCCeEEecCCCCCCCCCCCCCcCEEEECC------
Confidence 466666777788877755655552 432 7999999997633322233 3444555543321 14444442
Q ss_pred ccCCCHHHHHHHHHHHHHHHHHHHHHHHHH-HhCCCEEEEEcccccccHHHHHHHHHHHHHHhcCCceEEEecC
Q psy6720 79 RESVSREDLARATLVTITNNIGSIARMSAI-NENINKVVFVGNFLRVNPISMKLLAYAMDYWSKGTQKALFLEH 151 (182)
Q Consensus 79 ~~~~~~eDia~SLl~Mv~~nIg~la~l~A~-~~~i~~Ivf~G~~i~~~~~~m~~i~~ai~yws~g~~~alFl~h 151 (182)
....+++|++|+++.-|+..+-+.--...+ ...+++|+.+|.. ..|+..|++++.+ . ++...-++.
T Consensus 367 ~~~~~~~~l~rAvlEgia~~~~~~~~~l~~~g~~~~~i~~~GGg-a~s~~~~Qi~ADv---~---g~pV~~~~~ 433 (508)
T 3ifr_A 367 SLSHTRGHLWRALLEAVALAFRHHVAVLDDIGHAPQRFFASDGG-TRSRVWMGIMADV---L---QRPVQLLAN 433 (508)
T ss_dssp CTTCCHHHHHHHHHHHHHHHHHHHHHHHHHHTCCCCEEEEESGG-GGCHHHHHHHHHH---H---TSCEEEEEC
T ss_pred CCCCCHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCEEEEeCCc-ccCHHHHHHHHHH---h---CCeEEecCC
Confidence 124589999999999999988776544333 3457899999997 5688888998844 4 444445553
No 21
>3ven_A O-carbamoyltransferase TOBZ; antibiotic biosynthesis, substrate assisted catalysis, subst channeling, adenylation; HET: TLA; 1.57A {Streptoalloteichus tenebrarius} PDB: 3veo_A 3ves_A* 3vet_A* 3vew_A* 3ver_A* 3vf4_A* 3vf2_A* 3vex_A* 3vez_A*
Probab=89.06 E-value=2.6 Score=39.46 Aligned_cols=128 Identities=12% Similarity=0.098 Sum_probs=78.1
Q ss_pred CCCCceEeccc--ccchhhHHHHHHhhcCCCCHH--HHHHHHhcCCC--CCCccee-cc-ccCC-----------CCCCc
Q psy6720 4 PNLSPLCVLLT--SLGGGTFLGLCCLLTGCNSFE--EAIELATSGDN--TKVDKLV-RD-IYGG-----------SYERF 64 (182)
Q Consensus 4 ~~~~~~rvgGs--~iGGGT~~GL~~LLtg~~~f~--ei~~lA~~Gd~--~~vDllV-~D-Iyg~-----------~~~~l 64 (182)
.++++++++-+ .=.=|-+..-...++|....+ .++.||..|+. .-.|.+. .| -|.- +|.++
T Consensus 157 ~~~~l~~l~~~~~p~SLG~~Y~~vT~~LGF~~~gE~KVMGLApYG~p~~~~~~~l~~~dg~f~~~~~~~~~~~~~~~~~f 236 (576)
T 3ven_A 157 EGGKITVLDTVPGAWSLGFFYEHVSEYTGLGGDNPGKLMGLAAHGTTVDETLSAFAFDSDGYRLNLIDPQARDPEDWDEY 236 (576)
T ss_dssp ETTEEEEEEEEEGGGCHHHHHHHHHHHTTSCTTCHHHHHHHHTTSCCSCTTTTTEEEETTEEEETTSCTTCCCTTSSSSH
T ss_pred eCCEEEEEEEeccCChHHHHHHHHHHHcCCCCCCccceeEEcCCCCCchhhhHhhccCCCceeeeccccccccccccccc
Confidence 35666667665 123455666666666766545 49999999987 3444332 11 0100 11111
Q ss_pred c--------------------cccccccccccc--cccCCC--HHHHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEEEcc
Q psy6720 65 L--------------------GMFSFGHMNSKE--KRESVS--REDLARATLVTITNNIGSIARMSAINENINKVVFVGN 120 (182)
Q Consensus 65 g--------------------iASsFGK~~~~~--~~~~~~--~eDia~SLl~Mv~~nIg~la~l~A~~~~i~~Ivf~G~ 120 (182)
. ..--|+....+. ..++.. .+|||+|....+...+..++..+++.+++++|+++|.
T Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~p~R~~~~~~~~~~~~~~~dIAasfQ~~l~~~L~~~~~~a~~~tg~~~l~LaGG 316 (576)
T 3ven_A 237 SVTERAWFAHLERIYRLPPNEFVRRYDPAKGRVVRDTRRDPYEYRDLAATAQAALERAVFGLADSVLARTGERTLFVAGG 316 (576)
T ss_dssp HHHHHHHHHHHHHHSSSCCCCEEEEEETTTTEEEEEESSCGGGGHHHHHHHHHHHHHHHHHHHHHHHHHHTCSEEEEESG
T ss_pred cccccccccchhcccccchHHHHHHhcccccccccCCcccccHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCeEEecch
Confidence 0 001122211110 012333 7999999999999999999999999999999999999
Q ss_pred cccccHHHHHH
Q psy6720 121 FLRVNPISMKL 131 (182)
Q Consensus 121 ~i~~~~~~m~~ 131 (182)
...|.....++
T Consensus 317 Va~N~~L~~~l 327 (576)
T 3ven_A 317 VGLNATMNGKL 327 (576)
T ss_dssp GGGCHHHHHHH
T ss_pred HHHHHHHHHHH
Confidence 86665544333
No 22
>3jvp_A Ribulokinase; PSI-II, NYSGXRC, ribulose kinase, sugar kinase, crsytal structure, structural genomics, protein structure initiative; HET: 5RP; 2.31A {Bacillus halodurans} PDB: 3qdk_A*
Probab=88.81 E-value=6.1 Score=35.97 Aligned_cols=125 Identities=15% Similarity=0.001 Sum_probs=79.7
Q ss_pred CCCceEecccccchhhHHHHHHhhc-----------CCCCHHHHHHHHhcCCCCCCcce-eccccCCCCCCcc---cccc
Q psy6720 5 NLSPLCVLLTSLGGGTFLGLCCLLT-----------GCNSFEEAIELATSGDNTKVDKL-VRDIYGGSYERFL---GMFS 69 (182)
Q Consensus 5 ~~~~~rvgGs~iGGGT~~GL~~LLt-----------g~~~f~ei~~lA~~Gd~~~vDll-V~DIyg~~~~~lg---iASs 69 (182)
++.|--.+++.-+|..+-=|.+.+. |.+.++++.++|++-....-.++ +-.+.|...|-.. .++-
T Consensus 323 ~g~~~~~g~~~~~G~~~~W~~~~~~~~~~~~~~~~~g~~~~~~l~~~a~~~~~g~~gl~~lP~~~Ger~P~~d~~arg~~ 402 (572)
T 3jvp_A 323 PGYLGYEAGQSAVGDIFAWFVKHGVSAATFDEAQEKGVNVHALLEEKASQLRPGESGLLALDWWNGNRSILVDTELSGML 402 (572)
T ss_dssp TTSEEEEEEESCSHHHHHHHHHHTSBHHHHHHHHHTTBCHHHHHHHHHTSSCTTSSCCEEECCTTCCCTTTCCSSCCEEE
T ss_pred CCcEEEeehhhhHHHHHHHHHHhccchhhHHHHHhcCCCHHHHHHHHHHhCCCCCCCeEeCCccCCCCCCCCCCCcCEEE
Confidence 4566666777777777644555542 44558999999976544333333 3334454433221 3344
Q ss_pred cccccccccccCCCHHHHHHHHHHHHHHHHHHHHHHHHH-HhCCCEEEEEcccccccHHHHHHHHHH
Q psy6720 70 FGHMNSKEKRESVSREDLARATLVTITNNIGSIARMSAI-NENINKVVFVGNFLRVNPISMKLLAYA 135 (182)
Q Consensus 70 FGK~~~~~~~~~~~~eDia~SLl~Mv~~nIg~la~l~A~-~~~i~~Ivf~G~~i~~~~~~m~~i~~a 135 (182)
+|- ....+++|++|+++.-|++.+-+.--...+ -..+++|+.+|...+.++..+++++.+
T Consensus 403 ~Gl------~~~~t~~~l~RAvlEgia~~~r~~~~~l~~~g~~~~~i~~~GGga~ks~~~~Qi~ADv 463 (572)
T 3jvp_A 403 LGY------TLQTKPEEIYRALLEATAFGTRAIVDAFHGRGVEVHELYACGGLPQKNHLLMQIFADV 463 (572)
T ss_dssp EEE------CTTCCHHHHHHHHHHHHHHHHHHHHHHHHTTTCCEEEEEEESSHHHHCHHHHHHHHHH
T ss_pred ECC------CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcCEEEEEcCchhhCHHHHHHHHHH
Confidence 442 224689999999999999988776443322 224579999999753788899998844
No 23
>3ttc_A HYPF, transcriptional regulatory protein; Zn finger, nucleotide binding, hydrogenase maturation factor transferase; HET: ADP; 1.86A {Escherichia coli} PDB: 3tsp_A* 3tsu_A* 3ttf_A* 3ttd_A 3tsq_A
Probab=88.62 E-value=1.5 Score=41.67 Aligned_cols=64 Identities=20% Similarity=0.233 Sum_probs=51.7
Q ss_pred CCCHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEEEcccccccHHHHHHHHHHHHHHhcCCceEEEec
Q psy6720 81 SVSREDLARATLVTITNNIGSIARMSAINENINKVVFVGNFLRVNPISMKLLAYAMDYWSKGTQKALFLE 150 (182)
Q Consensus 81 ~~~~eDia~SLl~Mv~~nIg~la~l~A~~~~i~~Ivf~G~~i~~~~~~m~~i~~ai~yws~g~~~alFl~ 150 (182)
..+++|||++....+...+..++..+++.+++++|+++|.... |..+.+.+...+. +++.++.+
T Consensus 569 g~~~~dIAasFh~ala~~L~~~~~ra~~~~g~~~VvLsGGV~~-N~~Lre~L~~~l~-----g~~v~~p~ 632 (657)
T 3ttc_A 569 QAPVNQRAWAFHDALAQGFAALMREQATMRGITTLVFSGGVIH-NRLLRARLAHYLA-----DFTLLFPQ 632 (657)
T ss_dssp CCCHHHHHHHHHHHHHHHHHHHHHHHHHTTTCCEEEEESGGGG-CHHHHHHHHHHTT-----TSEEECCC
T ss_pred CCCHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCEEEEECcHHH-HHHHHHHHHHHhC-----CCEEEecC
Confidence 4689999999999999999999999999999999999999754 5555566664432 66765543
No 24
>3en9_A Glycoprotease, O-sialoglycoprotein endopeptidase/protein kinase; endopeptidase activity, protein kinase activity; HET: TBR; 2.67A {Methanocaldococcus jannaschii} PDB: 3enh_A* 2vwb_A*
Probab=88.47 E-value=2.3 Score=38.46 Aligned_cols=137 Identities=13% Similarity=-0.015 Sum_probs=80.9
Q ss_pred cCCCCceEecccc-cchh-hHHHHHHhhcCCC--CHHHHHHHHhcCCCCCCcceeccccCCCCCCccccccccccccccc
Q psy6720 3 IPNLSPLCVLLTS-LGGG-TFLGLCCLLTGCN--SFEEAIELATSGDNTKVDKLVRDIYGGSYERFLGMFSFGHMNSKEK 78 (182)
Q Consensus 3 ~~~~~~~rvgGs~-iGGG-T~~GL~~LLtg~~--~f~ei~~lA~~Gd~~~vDllV~DIyg~~~~~lgiASsFGK~~~~~~ 78 (182)
++.++|+++|.|. ..-| .|=-.+++| |.. .=-.|-++|++|+ ..+++-.. .-+.+.+-.|+.+..-+..
T Consensus 143 ~~~~~~~~lg~t~d~s~G~~~D~~a~~l-gl~~~gg~~ie~lA~~g~-~~~~~p~~-~~~~~~sfsgl~~~~~~~~---- 215 (540)
T 3en9_A 143 YVSKKYRVFGETLDIAVGNCLDQFARYV-NLPHPGGPYIEELARKGK-KLVDLPYT-VKGMDIAFSGLLTAAMRAY---- 215 (540)
T ss_dssp EETTEEEEEEEBSSSCHHHHHHHHHHHT-TCCSSCHHHHHHHHHTCC-CCCCCCCC-EETTEECCHHHHHHHHHHH----
T ss_pred EeCCceEEEeeccchHhHHHHHHHHHHc-CCCCCCHHHHHHHHHcCC-ccCcCCCC-CCCcceecHHHHHHHHHHH----
Confidence 3456777777652 2222 233344444 332 2247888999997 22332110 0011111111111110110
Q ss_pred ccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEEEcccccccHHHHHHHHHHHHHHhcCCceEEEec
Q psy6720 79 RESVSREDLARATLVTITNNIGSIARMSAINENINKVVFVGNFLRVNPISMKLLAYAMDYWSKGTQKALFLE 150 (182)
Q Consensus 79 ~~~~~~eDia~SLl~Mv~~nIg~la~l~A~~~~i~~Ivf~G~~i~~~~~~m~~i~~ai~yws~g~~~alFl~ 150 (182)
.+....+|+|+|....+...+...+..+++.+++++|+++|-... |..+.+.+..... ..+++.++++
T Consensus 216 ~~~~~~~~ia~~fq~~~~~~l~~~~~~a~~~~~~~~~~~~GGVa~-N~~l~~~l~~~~~---~~~~~~~~p~ 283 (540)
T 3en9_A 216 DAGERLEDICYSLQEYAFSMLTEITERALAHTNKGEVMLVGGVAA-NNRLREMLKAMCE---GQNVDFYVPP 283 (540)
T ss_dssp HTTCCHHHHHHHHHHHHHHHHHHHHHHHHHHHTCSEEEEESGGGG-CHHHHHHHHHHHH---HTTCEEECCC
T ss_pred HcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCeEEEeCcHHh-HHHHHHHHHHHHH---hcCCEEEeCC
Confidence 123578999999999999999999999999999999999999754 5556566664333 3467776643
No 25
>3ll3_A Gluconate kinase; xylulose kinase, nysgx, ATP, ADP, xylulose, transferase, structural genomics, PSI-2, protein structure initiative; HET: ATP DXP XUL ADP; 2.00A {Lactobacillus acidophilus} PDB: 3gbt_A*
Probab=88.16 E-value=6.7 Score=35.11 Aligned_cols=124 Identities=15% Similarity=0.038 Sum_probs=77.7
Q ss_pred CCCceEecccccchhhHHHHHHhhcCC-CCHHHHHHHHhcCCCCCCc-ceeccccCCCCCCcc---cccccccccccccc
Q psy6720 5 NLSPLCVLLTSLGGGTFLGLCCLLTGC-NSFEEAIELATSGDNTKVD-KLVRDIYGGSYERFL---GMFSFGHMNSKEKR 79 (182)
Q Consensus 5 ~~~~~rvgGs~iGGGT~~GL~~LLtg~-~~f~ei~~lA~~Gd~~~vD-llV~DIyg~~~~~lg---iASsFGK~~~~~~~ 79 (182)
++.|---|++..||.++.=+.+.+... .+.++++++|++-....-. +.+-...|...|... -++-+|- .
T Consensus 287 ~~~~~~~g~~~~~G~~~~W~~~~~~~~~~~~~~~~~~a~~~~~g~~gl~~~P~~~Ger~P~~d~~arg~~~Gl------~ 360 (504)
T 3ll3_A 287 KTHYLLGGPVNNGGIVFNWARQTLFDADETPQDFLDVAQTAPAGSRNLIFLPYLGGERAPIWDANARGSFVGL------T 360 (504)
T ss_dssp TTEEEEEEEESCSHHHHHHHHHHHTCTTCCHHHHHHHHHTSCTTGGGCEEECCTTCBCTTTCBTTCCEEEEEE------C
T ss_pred CCeEEEEeehhhHHHHHHHHHHHhccchhHHHHHHHHHhcCCCCCCCeEEecCccCCCCCCCCCccCeEEECC------C
Confidence 344554566777887776566555433 4677777777654432222 334444454433321 3333441 2
Q ss_pred cCCCHHHHHHHHHHHHHHHHHHHHHHHHH-HhCCCEEEEEcccccccHHHHHHHHHH
Q psy6720 80 ESVSREDLARATLVTITNNIGSIARMSAI-NENINKVVFVGNFLRVNPISMKLLAYA 135 (182)
Q Consensus 80 ~~~~~eDia~SLl~Mv~~nIg~la~l~A~-~~~i~~Ivf~G~~i~~~~~~m~~i~~a 135 (182)
...+++|++|+++.-|+..+-+.--...+ ...+++|+.+|.. ..++..+++++.+
T Consensus 361 ~~~~~~~l~RAvlEgia~~~r~~~~~l~~~g~~~~~i~~~GGg-a~s~~~~Qi~ADv 416 (504)
T 3ll3_A 361 RMHQKPEMARAVIEGIIFNLYDAASNLIKNTKKPVAINATGGF-LKSDFVRQLCANI 416 (504)
T ss_dssp TTCCHHHHHHHHHHHHHHHHHHHHHHHHTTSCCCSEEEEESGG-GCSHHHHHHHHHH
T ss_pred CCCCHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCCEEEEeCch-hcCHHHHHHHHHh
Confidence 34689999999999999988776443322 2357899999996 6788889998844
No 26
>2qm1_A Glucokinase; alpha-beta structure, putative helix-turn-helix, structural PSI-2, protein structure initiative; HET: MSE; 2.02A {Enterococcus faecalis}
Probab=81.78 E-value=9.2 Score=31.27 Aligned_cols=71 Identities=11% Similarity=0.017 Sum_probs=51.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEEEcccccccHHHHHHHHHHHHHHhc----CCceEEEecCCchh
Q psy6720 85 EDLARATLVTITNNIGSIARMSAINENINKVVFVGNFLRVNPISMKLLAYAMDYWSK----GTQKALFLEHEVCI 155 (182)
Q Consensus 85 eDia~SLl~Mv~~nIg~la~l~A~~~~i~~Ivf~G~~i~~~~~~m~~i~~ai~yws~----g~~~alFl~h~gyl 155 (182)
+..|+.++.-.+..+++.....+...+.+.||+.|......+...+.+...++-... ...+....+.+...
T Consensus 236 d~~a~~i~~~~~~~L~~~i~~l~~~l~p~~IvlgGg~~~~~~~~~~~l~~~l~~~~~~~~~~~~~i~~~~~~~~a 310 (326)
T 2qm1_A 236 DHFALMVVDRVCFYLGLATGNLGNTLNPDSVVIGGGVSAAGEFLRSRVEKYFQEFTFPQVRNSTKIKLAELGNEA 310 (326)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHHCCSEEEEEESGGGGTHHHHHHHHHHHHHTSCHHHHTTSEEEECSSGGGH
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEEcChhhhchHHHHHHHHHHHHHhhhhccCCCcEEEEcCcCchH
Confidence 356778888999999998888889999999999999987778777777766553321 24555554444443
No 27
>3r8e_A Hypothetical sugar kinase; ribonuclease H-like motif, structural genomics, joint center structural genomics, JCSG; HET: MSE; 1.65A {Cytophaga hutchinsonii}
Probab=81.55 E-value=12 Score=31.03 Aligned_cols=70 Identities=17% Similarity=-0.036 Sum_probs=54.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEEEcccccccHHHHHHHHHHHHHHh----cCCceEEEecCCchh
Q psy6720 86 DLARATLVTITNNIGSIARMSAINENINKVVFVGNFLRVNPISMKLLAYAMDYWS----KGTQKALFLEHEVCI 155 (182)
Q Consensus 86 Dia~SLl~Mv~~nIg~la~l~A~~~~i~~Ivf~G~~i~~~~~~m~~i~~ai~yws----~g~~~alFl~h~gyl 155 (182)
..|+.++.-.+..++......+...+.+.||+.|...+..+..++.+...++-.. ...++..+-+.+..-
T Consensus 235 ~~a~~~~~~~~~~La~~i~~l~~~ldP~~IvlgG~i~~~~~~l~~~l~~~l~~~~~~~~~~~~~i~~s~l~~~a 308 (321)
T 3r8e_A 235 ALALAVWADIGTIIGESLVNIVRVMDLNNILLGGGISGAFDYFVPNLKKAMLEHLPTYYTDDMYIGKATLENDA 308 (321)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEESGGGGGHHHHHHHHHHHHHHHSCHHHHTTCEEEECSSGGGH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEeChhcccchHHHHHHHHHHHHhcccccCCCCEEEEcCCCCcH
Confidence 4577889999999999999999999999999999998777877777776655432 245666666666555
No 28
>3vgl_A Glucokinase; ROK family, transferase; HET: BGC ANP; 1.55A {Streptomyces griseus} PDB: 3vgk_A* 3vgm_A*
Probab=81.37 E-value=14 Score=30.61 Aligned_cols=70 Identities=9% Similarity=0.004 Sum_probs=52.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEEEcccccccHHHHHHHHHHHHHHhc-----CCceEEEecCCchh
Q psy6720 86 DLARATLVTITNNIGSIARMSAINENINKVVFVGNFLRVNPISMKLLAYAMDYWSK-----GTQKALFLEHEVCI 155 (182)
Q Consensus 86 Dia~SLl~Mv~~nIg~la~l~A~~~~i~~Ivf~G~~i~~~~~~m~~i~~ai~yws~-----g~~~alFl~h~gyl 155 (182)
..|+.++.-.+..++......+...+.+.||+.|......+..++.+...++-+.. ...+...-+.+..-
T Consensus 227 ~~a~~~~~~~~~~La~~i~~l~~~l~p~~IvlgGgi~~~~~~l~~~l~~~l~~~~~~~~~~~~~~i~~s~l~~~a 301 (321)
T 3vgl_A 227 PVAVDSFRELARWAGAGLADLASLFDPSAFIVGGGVSDEGELVLDPIRKSFRRWLIGGEWRPHAQVLAAQLGGKA 301 (321)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHCCSEEEEESGGGGGTHHHHHHHHHHHHHHCTTGGGSCCCEEEECTTGGGH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEEeChhhcchHHHHHHHHHHHHHhcccccccCCCEEEECCCCCcH
Confidence 45678899999999999999999999999999999988878777777776664322 34455555544443
No 29
>3ezw_A Glycerol kinase; glycerol metabolism, allosteric regulation, microfluidics, in SITU DATA collection, ATP-binding, kinase binding; 2.00A {Escherichia coli} PDB: 1gla_G 1bo5_O* 1bot_O 1glb_G* 1glc_G* 1gld_G* 1gle_G* 1glf_O* 1bu6_O 1bwf_Y* 1glj_Y* 1gll_Y*
Probab=80.38 E-value=19 Score=32.32 Aligned_cols=133 Identities=16% Similarity=0.037 Sum_probs=78.1
Q ss_pred ceEecccccchhhHHHHHHhhcCCCCHHHHHHHHhcCCCCCCcceeccccCCCCCCcc---cccccccccccccccCCCH
Q psy6720 8 PLCVLLTSLGGGTFLGLCCLLTGCNSFEEAIELATSGDNTKVDKLVRDIYGGSYERFL---GMFSFGHMNSKEKRESVSR 84 (182)
Q Consensus 8 ~~rvgGs~iGGGT~~GL~~LLtg~~~f~ei~~lA~~Gd~~~vDllV~DIyg~~~~~lg---iASsFGK~~~~~~~~~~~~ 84 (182)
|.--|++..+|..+.=|...+....+..+..++++.=..++-=+.+-...|...|-.. -++-+|- ....++
T Consensus 300 y~~eg~~~~~G~~~~Wl~~~~~~~~~~~~~~~~~~~~~~~~gl~~lP~~~G~r~P~~d~~arG~~~Gl------t~~~~~ 373 (526)
T 3ezw_A 300 YALEGAVFMAGASIQWLRDEMKLINDAYDSEYFATKVQNTNGVYVVPAFTGLGAPYWDPYARGAIFGL------TRGVNA 373 (526)
T ss_dssp EEEEEEESCSHHHHHHHHHTSCCCCSSSCHHHHHTTSSSCTTCEEECCTTCBCTTTCBTTCCEEEEEE------CTTCCH
T ss_pred eeeHHHHHHHHHHHHHHHHHhccccchhHHHHHHhccCCCCCeEEeCCCCCCCCCCCCcccCeEEecC------CCCCCH
Confidence 3334666777777765666554444444444444332211111333334443322111 3344441 235689
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHH--hCCCEEEEEcccccccHHHHHHHHHHHHHHhcCCceEEEecCCc
Q psy6720 85 EDLARATLVTITNNIGSIARMSAIN--ENINKVVFVGNFLRVNPISMKLLAYAMDYWSKGTQKALFLEHEV 153 (182)
Q Consensus 85 eDia~SLl~Mv~~nIg~la~l~A~~--~~i~~Ivf~G~~i~~~~~~m~~i~~ai~yws~g~~~alFl~h~g 153 (182)
+|++|+++.-|++.+-++--...+. ..+++|+.+|.. ..|+..|++++.+ . ++...-++...
T Consensus 374 ~~i~RAvlEgia~~~r~~le~l~~~~g~~~~~i~v~GGg-aks~~~~Qi~ADv---l---g~pV~~~~~~E 437 (526)
T 3ezw_A 374 NHIIRATLESIAYQTRDVLEAMQADSGIRLHALRVDGGA-VANNFLMQFQSDI---L---GTRVERPEVRE 437 (526)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCSEEEEESGG-GGCHHHHHHHHHH---H---TSEEEEESCCC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCEEEEECch-hhCHHHHHHHHHH---H---CCEEEeCCCCc
Confidence 9999999999999887765544443 457899999997 6788899998844 4 45554455543
No 30
>3qbx_A Anhydro-N-acetylmuramic acid kinase; acetate and sugar kinases, HSP70, actin superfamily, anhydro-N-actetylmuramic acid binding; HET: AH0; 2.10A {Pseudomonas aeruginosa} PDB: 3qbw_A*
Probab=78.80 E-value=4.6 Score=35.85 Aligned_cols=107 Identities=17% Similarity=0.179 Sum_probs=63.2
Q ss_pred HHHHhhcCCCCHHHHHHHHhcCCCC--CCcceeccc-cCCCCCC-ccccccccc--cccc-ccccCCCHHHHHHHHHHHH
Q psy6720 23 GLCCLLTGCNSFEEAIELATSGDNT--KVDKLVRDI-YGGSYER-FLGMFSFGH--MNSK-EKRESVSREDLARATLVTI 95 (182)
Q Consensus 23 GL~~LLtg~~~f~ei~~lA~~Gd~~--~vDllV~DI-yg~~~~~-lgiASsFGK--~~~~-~~~~~~~~eDia~SLl~Mv 95 (182)
-.++..++ ..||+==++|++|... -+|-+..|= |..+.|+ .|- =-|+. +... .+-...++||+.+.|....
T Consensus 192 ~~~~~~~~-~~yD~dG~~A~~G~v~~~lL~~ll~~pyf~~~pPKStGR-E~F~~~~l~~~l~~~~~ls~~Dv~ATLt~~T 269 (371)
T 3qbx_A 192 AWIHHQRG-EHFDRDGAWAASGQVNHALLASLLADEFFAARGPKSTGR-ERFNLPWLQEHLARHPALPAADIQATLLELS 269 (371)
T ss_dssp HHHHHHHC-CSSCGGGHHHHTSCCCHHHHHHHHTSHHHHCCSSCCCCT-TTSSHHHHHHHC-----CCHHHHHHHHHHHH
T ss_pred HHHHHHhC-CCcccCcchhcCCCcCHHHHHHHhcCchhcCCCCCccCH-HHhCHHHHHHHHHhccCCCHHHHHHHHHHHH
Confidence 34555666 6788888889999632 112222222 2223332 220 00110 0000 0012578999999999999
Q ss_pred HHHHHHHHHHHHHHhCCCEEEEEcccccccHHHHHHHHH
Q psy6720 96 TNNIGSIARMSAINENINKVVFVGNFLRVNPISMKLLAY 134 (182)
Q Consensus 96 ~~nIg~la~l~A~~~~i~~Ivf~G~~i~~~~~~m~~i~~ 134 (182)
+++|.+---... ...++|+++|-= ..||.+|+.|+.
T Consensus 270 A~sIa~~~~~~~--~~~~~v~vcGGG-a~N~~Lm~~L~~ 305 (371)
T 3qbx_A 270 ARSISESLLDAQ--PDCEEVLVCGGG-AFNTALMKRLAM 305 (371)
T ss_dssp HHHHHHHHHHHC--TTCCEEEEESGG-GGCHHHHHHHHH
T ss_pred HHHHHHHHHhcc--CCCceEEEECCc-cCcHHHHHHHHH
Confidence 999987653332 247899999988 779999999994
No 31
>3cqy_A Anhydro-N-acetylmuramic acid kinase; APC7501, SO_1313, structural genomics, PSI-2, shewanella one MR-1, protein structure initiative; 2.30A {Shewanella oneidensis}
Probab=77.47 E-value=5.5 Score=35.33 Aligned_cols=106 Identities=17% Similarity=0.174 Sum_probs=64.0
Q ss_pred HHHhhcCCCCHHHHHHHHhcCCCCC--Ccceecccc-CCCCCC-ccccccccc--cccc-ccccCCCHHHHHHHHHHHHH
Q psy6720 24 LCCLLTGCNSFEEAIELATSGDNTK--VDKLVRDIY-GGSYER-FLGMFSFGH--MNSK-EKRESVSREDLARATLVTIT 96 (182)
Q Consensus 24 L~~LLtg~~~f~ei~~lA~~Gd~~~--vDllV~DIy-g~~~~~-lgiASsFGK--~~~~-~~~~~~~~eDia~SLl~Mv~ 96 (182)
.++..++ ..||+==++|++|.... ++-+..|=| ..+.|+ .| ==-|+. +... .+-.+.++||+.+.|..+.+
T Consensus 200 ~~~~~~~-~~yD~~G~~A~~G~v~~~lL~~ll~~pyf~~~pPKStG-RE~F~~~~l~~~l~~~~~l~~~Dv~ATLt~~TA 277 (370)
T 3cqy_A 200 WVQQVKN-ESYDKNGAWAASGKTDPQLLAQLLSHPYFSLAYPKSTG-RELFNQAWLEQQLSAFNQLNEEDIQSTLLDLTC 277 (370)
T ss_dssp HHHHHHC-CSSCGGGHHHHHSCCCHHHHHHHHTCGGGGSCSSCCCC-SSSSSHHHHHHHTTTCTTSCHHHHHHHHHHHHH
T ss_pred HHHHHHC-cCCCCCCHhhcCCCccHHHHHHHhcCccccCCCCCccC-hhhcCHHHHHHHHHhccCCCHHHHHHHHHHHHH
Confidence 4555666 47888888899987421 122222222 222232 12 000110 0000 00113579999999999999
Q ss_pred HHHHHHHHHHHHHhCCCEEEEEcccccccHHHHHHHHHH
Q psy6720 97 NNIGSIARMSAINENINKVVFVGNFLRVNPISMKLLAYA 135 (182)
Q Consensus 97 ~nIg~la~l~A~~~~i~~Ivf~G~~i~~~~~~m~~i~~a 135 (182)
.+|.+--.... +.++|+++|-= ..||.+|+.|+..
T Consensus 278 ~sIa~~~~~~~---~~~~v~vcGGG-a~N~~Lm~~L~~~ 312 (370)
T 3cqy_A 278 HSIAQDILKLA---QEGELFVCGGG-AFNAELMQRLAAL 312 (370)
T ss_dssp HHHHHHHHHHC---SSEEEEEESGG-GGCHHHHHHHHHH
T ss_pred HHHHHHHHhcC---CCCEEEEECCC-cCCHHHHHHHHHh
Confidence 99997664442 67799999998 7789999999853
No 32
>4bc3_A Xylulose kinase; transferase, glucuronate xylulokinase pathway; HET: MSE EDO; 1.68A {Homo sapiens} PDB: 4bc2_A* 4bc4_A* 4bc5_A*
Probab=77.14 E-value=15 Score=33.03 Aligned_cols=136 Identities=10% Similarity=-0.098 Sum_probs=74.4
Q ss_pred ceEecccccchhhHHHHHHhhcCCCCHHHHHHHHhcCCCCCCcce-eccccCCCCCCcccccccccccccccccCCCHHH
Q psy6720 8 PLCVLLTSLGGGTFLGLCCLLTGCNSFEEAIELATSGDNTKVDKL-VRDIYGGSYERFLGMFSFGHMNSKEKRESVSRED 86 (182)
Q Consensus 8 ~~rvgGs~iGGGT~~GL~~LLtg~~~f~ei~~lA~~Gd~~~vDll-V~DIyg~~~~~lgiASsFGK~~~~~~~~~~~~eD 86 (182)
|-..+.+.-||..+.=+.+.+ +..+++++.++|++-....-+++ +--..|...|.. .++-+....... ....+++|
T Consensus 332 ~~~~~~~~~gg~~~~w~~~~~-~~~~~~~l~~~a~~~~~g~~gl~~lp~~~Ger~P~~-~G~~~~~~~~~g-~~~~~~~~ 408 (538)
T 4bc3_A 332 YMALLCFKNGSLMREKIRNES-VSRSWSDFSKALQSTEMGNGGNLGFYFDVMEITPEI-IGRHRFNTENHK-VAAFPGDV 408 (538)
T ss_dssp EEEEEEESSSHHHHHHHHHHH-STTCHHHHHHHHHTSCTTGGGCEEEEESSCCSSSCC-CEEEEECTTSCE-ESCCCHHH
T ss_pred EEEeehhhccchHHHHHHHHh-cCCCHHHHHHHHhcCCCCCCCeEEeecCCCCcCCCC-Cceeeecccccc-ccCCCHHH
Confidence 333344444444443344444 45789999999977543332333 222334444432 111111100000 01257899
Q ss_pred HHHHHHHHHHHHHHHHHHHHHH-HhCCCEEEEEcccccccHHHHHHHHHHHHHHhcCCceEEEecCCc
Q psy6720 87 LARATLVTITNNIGSIARMSAI-NENINKVVFVGNFLRVNPISMKLLAYAMDYWSKGTQKALFLEHEV 153 (182)
Q Consensus 87 ia~SLl~Mv~~nIg~la~l~A~-~~~i~~Ivf~G~~i~~~~~~m~~i~~ai~yws~g~~~alFl~h~g 153 (182)
++|+++.-|++.+-..--...+ ...+++|+.+|.. ..++..|++++. -. ++...-++...
T Consensus 409 l~RAvlEgia~~~r~~~~~l~~~g~~~~~i~~~GGg-a~s~~~~Qi~AD---v~---g~pV~~~~~~e 469 (538)
T 4bc3_A 409 EVRALIEGQFMAKRIHAEGLGYRVMSKTKILATGGA-SHNREILQVLAD---VF---DAPVYVIDTAN 469 (538)
T ss_dssp HHHHHHHHHHHHHHHHHHHTTCCCCTTCCEEEEEGG-GGCHHHHHHHHH---HH---TSCEEECCCTT
T ss_pred HHHHHHHHHHHHHHHHHHHhhhcCCCCCeEEEEcch-hcCHHHHHHHHH---Hh---CCceEecCCCC
Confidence 9999999999988654321111 1235799999997 578889999884 44 44444444433
No 33
>2hoe_A N-acetylglucosamine kinase; TM1224, structural genomics, PSI-2, protein structure initiative, joint center structural genomics, JCSG; 2.46A {Thermotoga maritima} SCOP: a.4.5.63 c.55.1.10 c.55.1.10
Probab=75.85 E-value=22 Score=30.25 Aligned_cols=69 Identities=12% Similarity=-0.000 Sum_probs=51.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEEEcccccccHHHHHHHHHHHHHHhc--CCceEEEecCCc
Q psy6720 85 EDLARATLVTITNNIGSIARMSAINENINKVVFVGNFLRVNPISMKLLAYAMDYWSK--GTQKALFLEHEV 153 (182)
Q Consensus 85 eDia~SLl~Mv~~nIg~la~l~A~~~~i~~Ivf~G~~i~~~~~~m~~i~~ai~yws~--g~~~alFl~h~g 153 (182)
+..|+.++.-.+..+++.....+...+.+.||+.|......|...+.+...++-... ...+....+.+.
T Consensus 288 D~~a~~~l~~~~~~La~~i~~l~~~ldP~~IvlgG~~~~~~~~l~~~l~~~l~~~~~~~~~~~i~~s~~~~ 358 (380)
T 2hoe_A 288 DVRVKEYFDDIARYFSIGLLNLIHLFGISKIVIGGFFKELGENFLKKIKIEVETHLLYKHSVDMSFSKVQE 358 (380)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEGGGGGHHHHHHHHHHHHHHHCSSSCCCEEEECCCCS
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEEcCchhhhhHHHHHHHHHHHHHhcCCCCCcEEEEcCCCC
Confidence 356788899999999998888889999999999999987778777888776665432 234444444443
No 34
>2gup_A ROK family protein; sugar kinase, streptococcus pneumoniae TIGR4, AP sucrose, structural genomics, PSI; HET: SUC; 2.01A {Streptococcus pneumoniae} SCOP: c.55.1.10 c.55.1.10
Probab=75.45 E-value=28 Score=27.97 Aligned_cols=53 Identities=11% Similarity=0.053 Sum_probs=42.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEEEcccccccHHHHHHHHHHHHH
Q psy6720 85 EDLARATLVTITNNIGSIARMSAINENINKVVFVGNFLRVNPISMKLLAYAMDY 138 (182)
Q Consensus 85 eDia~SLl~Mv~~nIg~la~l~A~~~~i~~Ivf~G~~i~~~~~~m~~i~~ai~y 138 (182)
+..|+.++.-.+..+++.....+...+.+.||+.|... ..+..++.+...++-
T Consensus 201 d~~a~~i~~~~~~~L~~~i~~l~~~l~p~~IvlgG~i~-~~~~~~~~l~~~l~~ 253 (292)
T 2gup_A 201 NILCQEAIERMNRNLAQGLLNIQYLIDPGVISLGGSIS-QNPDFIQGVKKAVED 253 (292)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHHCCSEEEEESGGG-GCHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEEeCccc-cchHHHHHHHHHHHH
Confidence 35677888899999999988889999999999999985 466666666665543
No 35
>4htl_A Beta-glucoside kinase; structural genomics, sugar kinase, ROK family, PSI-biology, center for structural genomics, MCSG, transferase; HET: MSE; 1.64A {Listeria monocytogenes}
Probab=75.28 E-value=13 Score=30.44 Aligned_cols=69 Identities=9% Similarity=-0.017 Sum_probs=49.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEEEcccccccHHHHHHHHHHHHHHhcCCceEEEecCCchh
Q psy6720 86 DLARATLVTITNNIGSIARMSAINENINKVVFVGNFLRVNPISMKLLAYAMDYWSKGTQKALFLEHEVCI 155 (182)
Q Consensus 86 Dia~SLl~Mv~~nIg~la~l~A~~~~i~~Ivf~G~~i~~~~~~m~~i~~ai~yws~g~~~alFl~h~gyl 155 (182)
..|+.++.-....+++.........+.+.||+.|..... +..++.+...++.......+....+.+..-
T Consensus 212 ~~a~~~~~~~~~~La~~i~~l~~~~~p~~IvlgGgi~~~-~~~~~~l~~~l~~~~~~~~~i~~s~lg~~a 280 (297)
T 4htl_A 212 AVSERLITEFYTGICTGLYNLIYLFDPTHIFIGGGITSR-PTFIAELKHHMESFGLRDTIIETATHKNQA 280 (297)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHCCSEEEEESGGGGS-TTHHHHHHHHHTTTCCTTCEEEECSCTTTH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEEeCccccc-HHHHHHHHHHHHHhccCCCeEEECCcCChH
Confidence 456788899999999988888899999999999998765 556677776665433334444444444433
No 36
>2iir_A Acetate kinase; transferase; 3.30A {Thermotoga maritima}
Probab=75.05 E-value=14 Score=33.07 Aligned_cols=54 Identities=15% Similarity=0.265 Sum_probs=42.9
Q ss_pred HHHHHHHHHHHHHHH-HHHHHHHHHhCCCEEEEEcccccccHHHHHHHHHHHHHH
Q psy6720 86 DLARATLVTITNNIG-SIARMSAINENINKVVFVGNFLRVNPISMKLLAYAMDYW 139 (182)
Q Consensus 86 Dia~SLl~Mv~~nIg-~la~l~A~~~~i~~Ivf~G~~i~~~~~~m~~i~~ai~yw 139 (182)
+-|+-.+.|+++-|. +++.++|.+.+++-|||+|..=-+.+.+.+.+...+.|.
T Consensus 296 ~~A~lA~d~f~yri~k~IGa~~a~LggvDaIVFTgGIGEns~~vR~~i~~~l~~l 350 (403)
T 2iir_A 296 EWCKLVLEIYDYRIAKYIGAYAAAMNGVDAIVFTAGVGENSPITREDVCSYLEFL 350 (403)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHTCCSEEEEEHHHHTTCHHHHHHHHHTTGGG
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhCCCCEEEECcccccCCHHHHHHHHhhhhhc
Confidence 346667788887775 788888989999999999997668888777777666665
No 37
>1z6r_A MLC protein; transcriptional repressor, ROK family protein, DNA binding P helix-turn-helix, phosphotransferase system; 2.70A {Escherichia coli} SCOP: a.4.5.63 c.55.1.10 c.55.1.10 PDB: 3bp8_A
Probab=71.90 E-value=26 Score=29.90 Aligned_cols=73 Identities=11% Similarity=0.059 Sum_probs=52.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEEEcccccccHHHHHHHHHHHHHHhc----CCceEEEecCCchh--hhh
Q psy6720 86 DLARATLVTITNNIGSIARMSAINENINKVVFVGNFLRVNPISMKLLAYAMDYWSK----GTQKALFLEHEVCI--IGI 158 (182)
Q Consensus 86 Dia~SLl~Mv~~nIg~la~l~A~~~~i~~Ivf~G~~i~~~~~~m~~i~~ai~yws~----g~~~alFl~h~gyl--~ga 158 (182)
..|..++.-.+..+++.....+...+.+.||+.|......+..++.+...++-... ..++....+.+..- .||
T Consensus 309 ~~a~~~l~~~~~~L~~~i~~l~~~ldP~~IvlgG~i~~~~~~l~~~i~~~l~~~~~~~~~~~~~i~~s~l~~~a~~~GA 387 (406)
T 1z6r_A 309 LLAKDIITGVGAHVGRILAIMVNLFNPQKILIGSPLSKAADILFPVISDSIRQQALPAYSQHISVESTQFSNQGTMAGA 387 (406)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHCCSEEEEESGGGGGHHHHHHHHHHHHHHHSCHHHHTTCEEEECSCCCCTTTTHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEEeCccchhhHHHHHHHHHHHHHhcccccCCCcEEEEeCCCChHHHHHH
Confidence 45677888888889998888888999999999999887777777777766554321 34555454444332 455
No 38
>2ch5_A NAGK protein; transferase, N-acetylglucosamine, glcnac, sugar kinase, RIBO H fold, sugar kinase/HSP70/actin superfamily, domain rotati conformation; HET: NAG NDG; 1.9A {Homo sapiens} SCOP: c.55.1.5 c.55.1.5 PDB: 2ch6_A*
Probab=70.51 E-value=18 Score=29.83 Aligned_cols=55 Identities=11% Similarity=0.051 Sum_probs=46.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhCCC--------EEEEEcccccccHHHHHHHHHHHHHH
Q psy6720 85 EDLARATLVTITNNIGSIARMSAINENIN--------KVVFVGNFLRVNPISMKLLAYAMDYW 139 (182)
Q Consensus 85 eDia~SLl~Mv~~nIg~la~l~A~~~~i~--------~Ivf~G~~i~~~~~~m~~i~~ai~yw 139 (182)
+..|+.++.-.+..++......+...+.+ .||+.|......|..++.+...++-.
T Consensus 231 D~~a~~il~~~~~~La~~i~~l~~~~~p~~~~~~~~~~IvlgGgv~~~~~~~~~~~~~~l~~~ 293 (347)
T 2ch5_A 231 DPLSRYIFRKAGEMLGRHIVAVLPEIDPVLFQGKIGLPILCVGSVWKSWELLKEGFLLALTQG 293 (347)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHGGGSCGGGGCSTTCEEEEEESGGGGGHHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHhcccccccCCCceEEEECCcccCcHHHHHHHHHHHHhh
Confidence 45788999999999999999889999988 99999999877787777777666544
No 39
>4ijn_A Acetate kinase, acetokinase; proprionate kinase, ATP-dependent, metabolic intermediate biosynthesis, acetyl-COA biosynthesis, hydrolysis; HET: AMP; 1.70A {Mycobacterium smegmatis}
Probab=67.58 E-value=16 Score=32.67 Aligned_cols=54 Identities=7% Similarity=0.007 Sum_probs=39.4
Q ss_pred HHHHHHHHHHHHHHHHH-HHHHHHHhCCCEEEEEcccccccHHHHHHHHHHHHHH
Q psy6720 86 DLARATLVTITNNIGSI-ARMSAINENINKVVFVGNFLRVNPISMKLLAYAMDYW 139 (182)
Q Consensus 86 Dia~SLl~Mv~~nIg~l-a~l~A~~~~i~~Ivf~G~~i~~~~~~m~~i~~ai~yw 139 (182)
+-|+-.+.++.+.|..- +.+.|..-+++.|||+|.--.+.+.+.+.+...+.|.
T Consensus 297 ~~A~la~d~f~yriak~Iga~aa~LG~vDaIVfTGGIgEns~~vr~~I~~~l~~l 351 (398)
T 4ijn_A 297 EHAKLAYDVYIHRLRKYIGAYMAVLGRTDVISFTAGVGENVPPVRRDALAGLGGL 351 (398)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHSSCCEEEEEHHHHHHCHHHHHHHHTTCGGG
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhCCCcEEEECCccccccHHHHHHHHHHHhhc
Confidence 45788888888888765 4455555699999999997556676666666555555
No 40
>2e2o_A Hexokinase; acetate and sugar kinases, HSP70, actin superfamily, ribonuc fold, sugar kinase, glucose, phosphoryl transfer, transferase; HET: BGC; 1.65A {Sulfolobus tokodaii} PDB: 2e2n_A* 2e2p_A* 2e2q_A*
Probab=67.34 E-value=31 Score=27.85 Aligned_cols=53 Identities=23% Similarity=0.209 Sum_probs=43.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEEEcccccccHHHHHHHHHHHHH
Q psy6720 85 EDLARATLVTITNNIGSIARMSAINENINKVVFVGNFLRVNPISMKLLAYAMDY 138 (182)
Q Consensus 85 eDia~SLl~Mv~~nIg~la~l~A~~~~i~~Ivf~G~~i~~~~~~m~~i~~ai~y 138 (182)
+..|+.++.-.+..+++.....+...+.+.||+.|..... +..++.+...+.-
T Consensus 213 d~~a~~il~~~~~~La~~i~~l~~~l~p~~IvlgGgv~~~-~~~~~~l~~~~~~ 265 (299)
T 2e2o_A 213 DTVAMDILKQGAELLASQAVYLARKIGTNKVYLKGGMFRS-NIYHKFFTLYLEK 265 (299)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHHTCSEEEEESGGGGS-HHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEEECCccCc-HHHHHHHHHHCCC
Confidence 4578889999999999988888888899999999998877 7777777755443
No 41
>1z05_A Transcriptional regulator, ROK family; structural genomics, protein structure initiative, midwest center for structural genomics; 2.00A {Vibrio cholerae o1 biovar eltor} SCOP: a.4.5.63 c.55.1.10 c.55.1.10
Probab=66.10 E-value=43 Score=28.86 Aligned_cols=54 Identities=13% Similarity=0.095 Sum_probs=44.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEEEcccccccHHHHHHHHHHHHHH
Q psy6720 86 DLARATLVTITNNIGSIARMSAINENINKVVFVGNFLRVNPISMKLLAYAMDYW 139 (182)
Q Consensus 86 Dia~SLl~Mv~~nIg~la~l~A~~~~i~~Ivf~G~~i~~~~~~m~~i~~ai~yw 139 (182)
..|+.++.-.+..+++.....+...+.+.||+.|......+...+.+...++-.
T Consensus 332 ~~a~~il~~~~~~L~~~i~~l~~~ldP~~IvlgG~i~~~~~~l~~~l~~~l~~~ 385 (429)
T 1z05_A 332 PLAVDVIQQLGRYLGAAIAIVINLFNPEKILIGGVINQAKSILYPSIEQCIREQ 385 (429)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHCCSEEEEESGGGGGHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEEeCccccchHHHHHHHHHHHHHh
Confidence 456778888899999988888899999999999999887777777777666543
No 42
>3vov_A Glucokinase, hexokinase; ROK, sugar kinase, transferase; 2.02A {Thermus thermophilus}
Probab=64.12 E-value=30 Score=28.39 Aligned_cols=54 Identities=13% Similarity=-0.010 Sum_probs=45.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEEEcccc-cccHHHHHHHHHHHHHH
Q psy6720 86 DLARATLVTITNNIGSIARMSAINENINKVVFVGNFL-RVNPISMKLLAYAMDYW 139 (182)
Q Consensus 86 Dia~SLl~Mv~~nIg~la~l~A~~~~i~~Ivf~G~~i-~~~~~~m~~i~~ai~yw 139 (182)
..|+.++.-.+..+++.........+.+.||+.|... ...|..++.+...++-+
T Consensus 212 ~~a~~~~~~~~~~l~~~i~~l~~~~~p~~ivlgG~i~~~~~~~l~~~l~~~l~~~ 266 (302)
T 3vov_A 212 PKAERLVLQAARYVGIGLASLVKAFDPGVVVLGGGVALNAPEGYWEALLEAYRRY 266 (302)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHCCSEEEEESHHHHTSCHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEeChhHhhhhHHHHHHHHHHHHHh
Confidence 4567788999999999999999999999999999998 77787778777666544
No 43
>2aa4_A Mannac kinase, putative N-acetylmannosamine kinase; sugar methabolism, structural genomics, PSI, protein structure initiative; 2.20A {Escherichia coli} SCOP: c.55.1.10 c.55.1.10
Probab=63.20 E-value=22 Score=28.60 Aligned_cols=70 Identities=9% Similarity=-0.037 Sum_probs=48.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEEEcccccccHHHHHHHHHHHHHHhc-CCceEEEecCCchh
Q psy6720 85 EDLARATLVTITNNIGSIARMSAINENINKVVFVGNFLRVNPISMKLLAYAMDYWSK-GTQKALFLEHEVCI 155 (182)
Q Consensus 85 eDia~SLl~Mv~~nIg~la~l~A~~~~i~~Ivf~G~~i~~~~~~m~~i~~ai~yws~-g~~~alFl~h~gyl 155 (182)
+..|+.++.-.+..++......+...+.+.||+.|... ..+...+.+...++-... ...+..+.+.+...
T Consensus 207 d~~a~~i~~~~~~~L~~~i~~l~~~l~p~~ivlgG~~~-~~~~~~~~l~~~l~~~~~~~~~~i~~~~~~~~a 277 (289)
T 2aa4_A 207 DEQAQQLIHRSARTLARLIADIKATTDCQCVVVGGSVG-LAEGYLALVETYLAQEPAAFHVDLLAAHYRHDA 277 (289)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHHCCSEEEEEHHHH-TSTTHHHHHHHHHTTSCGGGCCEEEECSCSSCH
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEEeCccc-ccHHHHHHHHHHHHHhcCccCCEEEECCCCCch
Confidence 35677888888999999888889999999999999987 566666777654433211 13444455554443
No 44
>1saz_A Probable butyrate kinase 2; askha (acetate and sugar kinases, HSC70, actin) superfamily, acetate kinase, isobutyrate kinase; HET: ACP; 2.50A {Thermotoga maritima} SCOP: c.55.1.2 c.55.1.2 PDB: 1x9j_A*
Probab=63.19 E-value=22 Score=30.55 Aligned_cols=54 Identities=9% Similarity=0.161 Sum_probs=44.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHh--CCCEEEEEcccccccHHHHHHHHHHHHHH
Q psy6720 86 DLARATLVTITNNIGSIARMSAINE--NINKVVFVGNFLRVNPISMKLLAYAMDYW 139 (182)
Q Consensus 86 Dia~SLl~Mv~~nIg~la~l~A~~~--~i~~Ivf~G~~i~~~~~~m~~i~~ai~yw 139 (182)
..|+.++...+..+++.....+... +.+.||++|......+...+.+...++..
T Consensus 268 ~~a~~~l~~~~~~la~~i~~l~~~l~~~p~~IvlgGgi~~~~~~l~~~i~~~l~~~ 323 (381)
T 1saz_A 268 EWAKRVYRAMAYQIAKWIGKMAAVLKGEVDFIVLTGGLAHEKEFLVPWITKRVSFI 323 (381)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHTTTCCSEEEEEEGGGGCTTTHHHHHHHHHTTT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhcCCCCEEEEeCcCccChHHHHHHHHHHHHhh
Confidence 4678899999999999988888888 99999999998877665667777665543
No 45
>1g99_A Acetate kinase; alpha/beta, askha (acetate and sugar kinases, HSC70, actin) superfamily, conserved epsilon conformation; HET: ADP; 2.50A {Methanosarcina thermophila} SCOP: c.55.1.2 c.55.1.2 PDB: 1tuu_A* 1tuy_A*
Probab=62.70 E-value=21 Score=31.99 Aligned_cols=55 Identities=18% Similarity=0.135 Sum_probs=44.0
Q ss_pred HHHHHHHHHHHHHHH-HHHHHHHHHhCCCEEEEEcccccccHHHHHHHHHHHHHHh
Q psy6720 86 DLARATLVTITNNIG-SIARMSAINENINKVVFVGNFLRVNPISMKLLAYAMDYWS 140 (182)
Q Consensus 86 Dia~SLl~Mv~~nIg-~la~l~A~~~~i~~Ivf~G~~i~~~~~~m~~i~~ai~yws 140 (182)
+-|+-.+.|+++-|. +++.++|.+-+++-|||+|.-=-+.+.+.+.+...+.|..
T Consensus 296 ~~A~lA~d~f~yri~k~IGa~~a~LggvDaiVFTgGIGEns~~vR~~i~~~l~~lG 351 (408)
T 1g99_A 296 RKAELALEIFAYKVKKFIGEYSAVLNGADAVVFTAGIGENSASIRKRILTGLDGIG 351 (408)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHTTSCSEEEEEHHHHHHCHHHHHHHHTTCGGGT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhCCCCEEEECccccccCHHHHHHHHhhhhhhC
Confidence 346667788887776 7888888889999999999976588888787777777774
No 46
>3r9p_A ACKA; ssgcid, seattle structural genomics center for infectious DI acetate kinase, transferase; HET: PGE; 1.90A {Mycobacterium avium subsp} PDB: 3p4i_A 4dq8_A
Probab=61.02 E-value=19 Score=32.11 Aligned_cols=54 Identities=11% Similarity=0.102 Sum_probs=39.2
Q ss_pred HHHHHHHHHHHHHHHH-HHHHHHHHhCCCEEEEEcccccccHHHHHHHHHHHHHH
Q psy6720 86 DLARATLVTITNNIGS-IARMSAINENINKVVFVGNFLRVNPISMKLLAYAMDYW 139 (182)
Q Consensus 86 Dia~SLl~Mv~~nIg~-la~l~A~~~~i~~Ivf~G~~i~~~~~~m~~i~~ai~yw 139 (182)
+-|+-.+.|+.+.|.. ++.+.|.+-+++-|||+|.-=.+.+.+.+.+...+.|.
T Consensus 288 ~~A~lA~d~f~yri~k~Iga~aa~Lg~vDaIVfTGGIgens~~vR~~i~~~l~~l 342 (391)
T 3r9p_A 288 GAAQLAYSVFTHRLRKYIGAYLAVLGHTDVISFTAGIGENDAAVRRDAVSGMEEL 342 (391)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHSSCCEEEEEHHHHHHCHHHHHHHHTTCGGG
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhCCCCEEEECcccccCCHHHHHHHHHHHHhc
Confidence 3577778888887764 45666677799999999997555676666666555555
No 47
>4h0o_A Acetate kinase; askha (acetate and S kinase, HSC70, actin) superfamily, ribonuclease H-like fold transferase; 2.40A {Entamoeba histolytica}
Probab=60.39 E-value=48 Score=29.72 Aligned_cols=53 Identities=9% Similarity=0.077 Sum_probs=39.2
Q ss_pred HHHHHHHHHHHHHH-HHHHHHHHHhCCCEEEEEcccccccHHHHHHHHHHHHHH
Q psy6720 87 LARATLVTITNNIG-SIARMSAINENINKVVFVGNFLRVNPISMKLLAYAMDYW 139 (182)
Q Consensus 87 ia~SLl~Mv~~nIg-~la~l~A~~~~i~~Ivf~G~~i~~~~~~m~~i~~ai~yw 139 (182)
-|+-.+.|+.+.|. +++.++|.+.|++-|||+|.-=.+.+.+.+.+..-+.|.
T Consensus 301 ~A~lA~d~f~yri~k~IGa~aa~L~GvDaIVFTgGIGEns~~vR~~i~~~l~~l 354 (404)
T 4h0o_A 301 TCQLAFDVYIKQLAKTIGGLMVEIGGLDLLVFTDQMGLEVWQVRKAICDKMKFL 354 (404)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHTCCSEEEEEHHHHHHCHHHHHHHHHHTGGG
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEECCccccCcHHHHHHHHhhhhhc
Confidence 45666777777764 567888889999999999996456576666666566665
No 48
>2e1z_A Propionate kinase; TDCD, native, acetate kinase, nucleotide, AP4A, ADP, ATP, AMPPNP, transferase; HET: B4P; 1.98A {Salmonella typhimurium} SCOP: c.55.1.2 c.55.1.2 PDB: 1x3n_A* 2e1y_A 1x3m_A* 2e20_A*
Probab=60.04 E-value=20 Score=32.18 Aligned_cols=55 Identities=18% Similarity=0.260 Sum_probs=43.9
Q ss_pred HHHHHHHHHHHHHHH-HHHHHHHHHhCCCEEEEEcccccccHHHHHHHHHHHHHHh
Q psy6720 86 DLARATLVTITNNIG-SIARMSAINENINKVVFVGNFLRVNPISMKLLAYAMDYWS 140 (182)
Q Consensus 86 Dia~SLl~Mv~~nIg-~la~l~A~~~~i~~Ivf~G~~i~~~~~~m~~i~~ai~yws 140 (182)
+-|+-.+.|+++-|. +++.++|.+-+++-|||+|.-=-+.+.+.+.+...+.|..
T Consensus 304 ~~A~lA~d~f~yri~k~IGa~aa~LggvDaIVFTgGIGEns~~vR~~i~~~l~~lG 359 (415)
T 2e1z_A 304 ERARLAIKTFVHRIARHIAGHAASLHRLDGIIFTGGIGENSVLIRQLVIEHLGVLG 359 (415)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHTTCSSCCEEEEEHHHHHHCHHHHHHHHHTTGGGT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhCCCCEEEECccccccCHHHHHHHHhhHhhcC
Confidence 346667788887776 7888888889999999999976578888788877777774
No 49
>2uyt_A Rhamnulokinase; rhamnose degradation, IN-LINE phosphoryl transfer, hexokinas actin superfamily, L-rhamnulose kinase, rhamnose metabolism kinase; HET: LRH ADP; 1.55A {Escherichia coli} PDB: 2cgk_A 2cgj_A* 2cgl_A*
Probab=56.67 E-value=50 Score=28.92 Aligned_cols=54 Identities=22% Similarity=0.176 Sum_probs=44.2
Q ss_pred CCCHHHHHHHHHHHHHHHHHHHHHHHHHH--hCCCEEEEEcccccccHHHHHHHHHH
Q psy6720 81 SVSREDLARATLVTITNNIGSIARMSAIN--ENINKVVFVGNFLRVNPISMKLLAYA 135 (182)
Q Consensus 81 ~~~~eDia~SLl~Mv~~nIg~la~l~A~~--~~i~~Ivf~G~~i~~~~~~m~~i~~a 135 (182)
..+++|++|+++.-|++.+-+.--...+. ..+++|+.+|.. ..|+..|++++.+
T Consensus 361 ~~t~~~l~RAvlEgia~~~r~~~~~l~~~~g~~~~~i~~~GGg-aks~~~~Qi~ADv 416 (489)
T 2uyt_A 361 PESDAELARCIFDSLALLYADVLHELAQLRGEDFSQLHIVGGG-CQNTLLNQLCADA 416 (489)
T ss_dssp CCSHHHHHHHHHHHHHHHHHHHHHHHHHHHTCCCSEEEEESGG-GGCHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCEEEEeCCh-hhhHHHHHHHHHH
Confidence 56899999999999999988776655553 457899999997 6788899998854
No 50
>3khy_A Propionate kinase; csgid, IDP01739, ATP-binding, nucleotide-binding, transferase, structural genomics; 1.98A {Francisella tularensis subsp}
Probab=55.46 E-value=32 Score=30.64 Aligned_cols=53 Identities=13% Similarity=0.172 Sum_probs=39.3
Q ss_pred HHHHHHHHHHHHHH-HHHHHHHHHhCCCEEEEEcccccccHHHHHHHHHHHHHH
Q psy6720 87 LARATLVTITNNIG-SIARMSAINENINKVVFVGNFLRVNPISMKLLAYAMDYW 139 (182)
Q Consensus 87 ia~SLl~Mv~~nIg-~la~l~A~~~~i~~Ivf~G~~i~~~~~~m~~i~~ai~yw 139 (182)
-|+-.+.|+.+.|. +++.++|.+.+++-|||+|.-=.+.+.+.+.+..-+.|.
T Consensus 288 ~A~lA~d~f~yri~k~IGa~aa~L~gvDaIVFTgGIgEns~~iR~~i~~~l~~l 341 (384)
T 3khy_A 288 LAKLAIEIFSHRVAKFVASYMIYFNKLDALVFTGGIGENAANIRKNIISKLANL 341 (384)
T ss_dssp HHHHHHHHHHHHHHHHHHHHGGGCSSCCEEEEEHHHHHHCHHHHHHHHHHTGGG
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhCCCCEEEECCccccCcHHHHHHHHhhcccc
Confidence 46667777777775 557777878899999999997657676666666566665
No 51
>2ap1_A Putative regulator protein; zinc binding protein, structural genomics, PSI, protein STRU initiative; 1.90A {Salmonella typhimurium} SCOP: c.55.1.10 c.55.1.10
Probab=54.63 E-value=24 Score=28.98 Aligned_cols=45 Identities=11% Similarity=0.067 Sum_probs=36.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEEEcccccccHHHHH
Q psy6720 86 DLARATLVTITNNIGSIARMSAINENINKVVFVGNFLRVNPISMK 130 (182)
Q Consensus 86 Dia~SLl~Mv~~nIg~la~l~A~~~~i~~Ivf~G~~i~~~~~~m~ 130 (182)
..|+.++.-.+..+++.....+...+.+.||+.|......+...+
T Consensus 244 ~~a~~il~~~~~~La~~i~~l~~~l~p~~IvlgG~i~~~~~~~~~ 288 (327)
T 2ap1_A 244 EQAHAHVERYLDLLAVCLGNILTIVDPDLLVIGGGLSNFTAITTQ 288 (327)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHCCSEEEEESGGGGSTHHHHS
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEEeChhhcchhHHHH
Confidence 457788889999999998888999999999999998776554444
No 52
>2o3a_A UPF0106 protein AF_0751; structural genomics, unknown function, PSI-2, protein structure initiative; 2.20A {Archaeoglobus fulgidus} SCOP: c.116.1.8
Probab=53.66 E-value=24 Score=28.34 Aligned_cols=37 Identities=11% Similarity=0.211 Sum_probs=33.2
Q ss_pred HHHHHHHHHHHhCCCEEEEEcccccccHHHHHHHHHHHHHH
Q psy6720 99 IGSIARMSAINENINKVVFVGNFLRVNPISMKLLAYAMDYW 139 (182)
Q Consensus 99 Ig~la~l~A~~~~i~~Ivf~G~~i~~~~~~m~~i~~ai~yw 139 (182)
|.+...|.|++.|.++|++.+. .+..++++....+-|
T Consensus 20 iTTHV~LtARAfGA~~iil~~~----D~~v~esv~dV~~rw 56 (178)
T 2o3a_A 20 ISTHVALTARAFGAKGIYFDTE----DKSVFESVRDVVERW 56 (178)
T ss_dssp HHHHHHHHHHHTTCSEEEESSC----CHHHHHHHHHHHHHH
T ss_pred hhhHHHHHHHHhCCCeeEEeCC----CHHHHHHHHHHHHhc
Confidence 5677889999999999999997 677889999999999
No 53
>3l0q_A Xylulose kinase; xlylulose kinase, SGX, PSI, structural genomics, protein structure initiative; HET: MSE XUL EPE; 1.61A {Yersinia pseudotuberculosis} PDB: 3gg4_A*
Probab=52.06 E-value=1.3e+02 Score=26.89 Aligned_cols=136 Identities=18% Similarity=0.045 Sum_probs=81.3
Q ss_pred CCCceEecccccchhhHHHHHHhh------------cCCCCHHHHHHHHh---cCCCC----CCc-ceeccccCCCCCCc
Q psy6720 5 NLSPLCVLLTSLGGGTFLGLCCLL------------TGCNSFEEAIELAT---SGDNT----KVD-KLVRDIYGGSYERF 64 (182)
Q Consensus 5 ~~~~~rvgGs~iGGGT~~GL~~LL------------tg~~~f~ei~~lA~---~Gd~~----~vD-llV~DIyg~~~~~l 64 (182)
++.|-.-+++.-+|..+-=+.+.+ .+.+.++++.++++ .|... .-+ +.+-...|...|-.
T Consensus 315 ~~~~~~~g~~~~~G~~~~W~~~~~~~~~~~~~~a~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~gl~flP~~~Ger~P~~ 394 (554)
T 3l0q_A 315 PEYWLNEGGQSATGALIDHIIQSHPCYPALLEQAKNKGETIYEALNYILRQMAGEPENIAFLTNDIHMLPYFHGNRSPRA 394 (554)
T ss_dssp TTCEEEEEEESCSHHHHHHHHHTSTTHHHHHHHHHHTTCCHHHHHHHHHHHHHSSGGGGGGGGTTCCEECCTTCBCSSSC
T ss_pred CCceEecchhhhhHHHHHHHHHhcccchHHHHHHHhcCCCHHHHHHHHHHhcCCCCCccccccCceEEcccccCCCCCCC
Confidence 356776777788887775555543 14445666555442 33110 112 34445555543322
Q ss_pred c---cccccccccccccccCCCHHHH---HHHHHHHHHHHHHHHHHHHHH-HhCCCEEEEEcccccccHHHHHHHHHHHH
Q psy6720 65 L---GMFSFGHMNSKEKRESVSREDL---ARATLVTITNNIGSIARMSAI-NENINKVVFVGNFLRVNPISMKLLAYAMD 137 (182)
Q Consensus 65 g---iASsFGK~~~~~~~~~~~~eDi---a~SLl~Mv~~nIg~la~l~A~-~~~i~~Ivf~G~~i~~~~~~m~~i~~ai~ 137 (182)
. .++-+|- ....+++|+ +++++.-|++.+-++--...+ ...+++|+.+|.. ..++..|++++-
T Consensus 395 d~~arg~~~Gl------~~~~~~~~l~r~~rAvlEgia~~~r~~~e~l~~~g~~~~~i~~~GG~-aks~~~~Qi~AD--- 464 (554)
T 3l0q_A 395 NPNLTGIITGL------KLSTTPEDMALRYLATIQALALGTRHIIETMNQNGYNIDTMMASGGG-TKNPIFVQEHAN--- 464 (554)
T ss_dssp BTTCCCEECSC------CSCCSHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTCCCCEEEEESGG-GGCHHHHHHHHH---
T ss_pred CCCCcEEEECC------CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCCEEEEeCcc-ccCHHHHHHHHH---
Confidence 1 4444452 234689999 779999999988776543332 2347899999996 678889999884
Q ss_pred HHhcCCceEEEecCCc
Q psy6720 138 YWSKGTQKALFLEHEV 153 (182)
Q Consensus 138 yws~g~~~alFl~h~g 153 (182)
-. ++...-++...
T Consensus 465 v~---g~pV~~~~~~e 477 (554)
T 3l0q_A 465 AT---GCAMLLPEESE 477 (554)
T ss_dssp HH---CCEEEEESCSC
T ss_pred hh---CCeEEecCCCc
Confidence 44 45555555544
No 54
>4db3_A Glcnac kinase, N-acetyl-D-glucosamine kinase; structural genomics, center for structural genomics of infec diseases, csgid, transferase; 1.95A {Vibrio vulnificus}
Probab=51.59 E-value=77 Score=26.20 Aligned_cols=74 Identities=8% Similarity=0.007 Sum_probs=49.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEEEcccccccHHHHHHHHHHHHHHhc---CCceEEEecCCchhhhhhHH
Q psy6720 86 DLARATLVTITNNIGSIARMSAINENINKVVFVGNFLRVNPISMKLLAYAMDYWSK---GTQKALFLEHEVCIIGIFDH 161 (182)
Q Consensus 86 Dia~SLl~Mv~~nIg~la~l~A~~~~i~~Ivf~G~~i~~~~~~m~~i~~ai~yws~---g~~~alFl~h~gyl~ga~~a 161 (182)
..|+.++.-.+..++......+...+.+.||+.|..... +..++.+...++-+.. ...+...-+.+..- ++.+|
T Consensus 244 ~~a~~~~~~~~~~La~~i~~l~~~l~p~~IvlgGgi~~~-~~l~~~l~~~l~~~~~~~~~~~~i~~s~lg~~a-~~~GA 320 (327)
T 4db3_A 244 EKAAEHVERFMELLAICFGNIFTANDPHVVALGGGLSNF-ELIYEEMPKRVPKYLLSVAKCPKIIKAKHGDSG-GVRGA 320 (327)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHCCSEEEEESGGGGC-THHHHHHHHHGGGGSCTTCCCCEEEECSCGGGH-HHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEEeCcccch-HHHHHHHHHHHHHHhccccCCCEEEECCCCCcH-HHHHH
Confidence 356778999999999999999999999999999987654 5556666655443321 23444444444443 44333
No 55
>2q2r_A Glucokinase 1, putative; ATPase hexose kinase family, transferase; HET: BGC ADP; 2.10A {Trypanosoma cruzi}
Probab=47.64 E-value=1.1e+02 Score=25.64 Aligned_cols=52 Identities=12% Similarity=0.070 Sum_probs=39.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEEEcccccccHHHHH--HHHHHH
Q psy6720 85 EDLARATLVTITNNIGSIARMSAINENINKVVFVGNFLRVNPISMK--LLAYAM 136 (182)
Q Consensus 85 eDia~SLl~Mv~~nIg~la~l~A~~~~i~~Ivf~G~~i~~~~~~m~--~i~~ai 136 (182)
+..|+.++...+..+++.....+...+.+.||+.|..+...+..++ .+...+
T Consensus 278 D~~a~~~l~~~~~~L~~~i~~l~~~l~p~~IvlgGG~~~~~~~~~~~~~i~~~l 331 (373)
T 2q2r_A 278 DANACKAMKKYHEYLMRVGSEASMALLPLTIVLVGDNIVNNAFFYRNPQNLKEM 331 (373)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHHCCSEEEECSHHHHHTHHHHHSHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEeCChHhCchhhhcchhHHHHH
Confidence 3467889999999999999999999999999997774444465555 444433
No 56
>2yy8_A ATRM56, UPF0106 protein PH0461; DEEP trefoil knot, structural genomics, NPPSFA; HET: SAM MTA; 2.48A {Pyrococcus horikoshii}
Probab=47.46 E-value=34 Score=27.97 Aligned_cols=38 Identities=5% Similarity=0.144 Sum_probs=33.5
Q ss_pred HHHHHHHHHHHhCCCEEEEEcccccccHHHHHHHHHHHHHH
Q psy6720 99 IGSIARMSAINENINKVVFVGNFLRVNPISMKLLAYAMDYW 139 (182)
Q Consensus 99 Ig~la~l~A~~~~i~~Ivf~G~~i~~~~~~m~~i~~ai~yw 139 (182)
|.+...|.|++.|.++|++.+.. .+..++++...++-|
T Consensus 17 iTTHV~LtARAfGA~~iil~~~~---D~~v~esv~dV~~rW 54 (201)
T 2yy8_A 17 VTTHVALTARAFGADGIIIASEE---DEKVKESVEDVVKRW 54 (201)
T ss_dssp HHHHHHHHHHHTTCSEEEESSSC---CHHHHHHHHHHHHHH
T ss_pred hhhHHHHHHHHhcCCeEEEcCCc---ChhHHHHHHHHHHhc
Confidence 56777899999999999999974 677889999999999
No 57
>1nrz_A PTS system, sorbose-specific IIB component; beta sheet core, flanking helices, right handed beta-alpha-B crossover, transferase; 1.75A {Klebsiella pneumoniae} SCOP: c.38.1.1
Probab=42.57 E-value=26 Score=27.29 Aligned_cols=52 Identities=13% Similarity=0.177 Sum_probs=41.5
Q ss_pred HHHHHHHHHHhCCCEEEEEcccccccHHHHHHHHHHHHHHhcCCceEEEecCCchh
Q psy6720 100 GSIARMSAINENINKVVFVGNFLRVNPISMKLLAYAMDYWSKGTQKALFLEHEVCI 155 (182)
Q Consensus 100 g~la~l~A~~~~i~~Ivf~G~~i~~~~~~m~~i~~ai~yws~g~~~alFl~h~gyl 155 (182)
||.+..-++..++++|+.+-.-+.++|..+.++.-| ...+++..|+.-+..+
T Consensus 15 GQV~t~W~k~~~~~~IiVvnD~vA~D~~~k~~lk~a----~P~gvk~~i~sve~ai 66 (164)
T 1nrz_A 15 GQVTTVWSKVANAQRIIICNDDVFNDEVRRTLLRQA----APPGMKVNVVSLEKAV 66 (164)
T ss_dssp HHHHHHHHHHHTCSEEEEECHHHHTCHHHHHHHHHT----CCTTCEEEEECHHHHH
T ss_pred hhheeeeccccCCCEEEEeCccccCCHHHHHHHHhc----CCCCCeEEEEEHHHHH
Confidence 899999999999999999999999999887777654 2346666665555444
No 58
>3mcp_A Glucokinase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2, transferase; 3.00A {Parabacteroides distasonis}
Probab=41.83 E-value=99 Score=26.55 Aligned_cols=54 Identities=13% Similarity=0.080 Sum_probs=45.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEEEcccccccHHHHHHHHHHHHHHh
Q psy6720 86 DLARATLVTITNNIGSIARMSAINENINKVVFVGNFLRVNPISMKLLAYAMDYWS 140 (182)
Q Consensus 86 Dia~SLl~Mv~~nIg~la~l~A~~~~i~~Ivf~G~~i~~~~~~m~~i~~ai~yws 140 (182)
..|+.++.-.+..+|......+...+. .||+.|......+..++.+...++-+.
T Consensus 234 ~~a~~~l~~~~~~Lg~~i~nl~~~ldP-~IviGGgi~~~~~~~~~~l~~~l~~~~ 287 (366)
T 3mcp_A 234 EAAIAAFEELGEMAGDALASAITLIDG-LIVIGGGLSGASKYILPVLLKEMNAQT 287 (366)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHCS-EEEEESGGGGGHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHCC-EEEEEChhhhchHHHHHHHHHHHHHhc
Confidence 577888999999999999999999999 999999988877888888877766553
No 59
>3eye_A PTS system N-acetylgalactosamine-specific IIB component 1; structural genomics, phosphotransferase, PSI-2, protein structure initiative; 1.45A {Escherichia coli O157} SCOP: c.38.1.0
Probab=39.20 E-value=22 Score=27.99 Aligned_cols=52 Identities=19% Similarity=0.202 Sum_probs=41.4
Q ss_pred HHHHHHHHHHhCCCEEEEEcccccccHHHHHHHHHHHHHHhcC-CceEEEecCCchh
Q psy6720 100 GSIARMSAINENINKVVFVGNFLRVNPISMKLLAYAMDYWSKG-TQKALFLEHEVCI 155 (182)
Q Consensus 100 g~la~l~A~~~~i~~Ivf~G~~i~~~~~~m~~i~~ai~yws~g-~~~alFl~h~gyl 155 (182)
||.+..-++..++++|+.+-.-+.++|+.+.++.-|. .. +++..|+.-+..+
T Consensus 20 GQVat~W~k~~~~~~IiVvnD~vA~D~~~k~~lkmA~----P~~gvk~~i~sve~ai 72 (168)
T 3eye_A 20 GQVGVTWTSTIGANLLVVVDDVVANDDIQQKLMGITA----ETYGFGIRFFTIEKTI 72 (168)
T ss_dssp THHHHHHHHHHTCSEEEEECHHHHHSGGGGHHHHHHH----HHHTCEEEEECHHHHH
T ss_pred hhhhheeccccCCCEEEEEcccccCCHHHHHHHHhcC----CCCCCeEEEEEHHHHH
Confidence 7999999999999999999999999999888877663 22 5666665555433
No 60
>1vsq_C Mannose-specific phosphotransferase enzyme IIB component; sugar transport, complex (transferase/phosphocarrier, cytoplasm, membrane; HET: NEP; NMR {Escherichia coli} PDB: 2jzn_C 2jzo_D 2jzh_A
Probab=35.36 E-value=26 Score=27.27 Aligned_cols=52 Identities=15% Similarity=0.248 Sum_probs=40.8
Q ss_pred HHHHHHHHHHhCCCEEEEEcccccccHHHHHHHHHHHHHHhcCCceEEEecCCchh
Q psy6720 100 GSIARMSAINENINKVVFVGNFLRVNPISMKLLAYAMDYWSKGTQKALFLEHEVCI 155 (182)
Q Consensus 100 g~la~l~A~~~~i~~Ivf~G~~i~~~~~~m~~i~~ai~yws~g~~~alFl~h~gyl 155 (182)
||.+..-++..++++|+.+-.-+.++|..+.++.-| ...+++..|+.-+..+
T Consensus 18 GQV~t~W~~~~~~~~IiVvnD~vA~D~~~k~~lk~a----~P~gvk~~i~sve~ai 69 (165)
T 1vsq_C 18 GQVATRWTKETNVSRIIVVSDEVAADTVRKTLLTQV----APPGVTAHVVDVAKMI 69 (165)
T ss_dssp TTHHHHHHHHTTCSEEEEECHHHHTCHHHHHHHHHT----CCTTCEEEEECHHHHH
T ss_pred hheeeeeccccCCCEEEEeCccccCCHHHHHHHHhc----CCCCCeEEEEEHHHHH
Confidence 789999999999999999999999999887777654 2346666665555444
No 61
>2yhw_A Bifunctional UDP-N-acetylglucosamine 2-epimerase/N-acetylmannosamine kinase; transferase, sialic acid, mannac, ROK family; HET: BM3 2PE; 1.64A {Homo sapiens} PDB: 2yhy_A* 2yi1_A* 3eo3_A
Probab=30.95 E-value=1.5e+02 Score=24.23 Aligned_cols=49 Identities=14% Similarity=0.088 Sum_probs=38.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEEEcccccccHHHHHHHHHHHH
Q psy6720 86 DLARATLVTITNNIGSIARMSAINENINKVVFVGNFLRVNPISMKLLAYAMD 137 (182)
Q Consensus 86 Dia~SLl~Mv~~nIg~la~l~A~~~~i~~Ivf~G~~i~~~~~~m~~i~~ai~ 137 (182)
..|+.++.-.+..+++.....+...+.+.||+.|... +...+.+...++
T Consensus 259 ~~a~~il~~~~~~La~~i~~l~~~l~P~~IvlgG~i~---~~~~~~l~~~l~ 307 (343)
T 2yhw_A 259 AKAQSILRTAGTALGLGVVNILHTMNPSLVILSGVLA---SHYIHIVKDVIR 307 (343)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHTCCSEEEEESTTH---HHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEEeCCcH---HHHHHHHHHHHH
Confidence 4577888999999999998889999999999999974 344455554444
No 62
>3h1q_A Ethanolamine utilization protein EUTJ; ethanolamine utilization EUTJ, structural genomics, PSI-2; HET: ATP; 2.80A {Carboxydothermus hydrogenoformans z-29organism_taxid}
Probab=30.01 E-value=1.3e+02 Score=23.51 Aligned_cols=63 Identities=10% Similarity=0.038 Sum_probs=37.6
Q ss_pred HHHHHHHHHHHHHHHHHHHhC-CCEEEEEcccccccHHHHHHHHHHHHHHhcCCceEEEecCCchhhhhhHH
Q psy6720 91 TLVTITNNIGSIARMSAINEN-INKVVFVGNFLRVNPISMKLLAYAMDYWSKGTQKALFLEHEVCIIGIFDH 161 (182)
Q Consensus 91 Ll~Mv~~nIg~la~l~A~~~~-i~~Ivf~G~~i~~~~~~m~~i~~ai~yws~g~~~alFl~h~gyl~ga~~a 161 (182)
++.-+.+.|.....-.-+..+ +++|+++|.. ...|...+.++. .+ +++..-..+..|. +|.||
T Consensus 205 ~~~~~~~~i~~~i~~~l~~~~~~~~ivL~GG~-a~~~~l~~~l~~---~l---~~~v~~~~~p~~a-~a~Ga 268 (272)
T 3h1q_A 205 VVRPVIEKMALIVKEVIKNYDQTLPVYVVGGT-AYLTGFSEEFSR---FL---GKEVQVPIHPLLV-TPLGI 268 (272)
T ss_dssp HHHHHHHHHHHHHHHHTTTSCSSCCEEEESGG-GGSTTHHHHHHH---HH---SSCCBCCSSGGGH-HHHHH
T ss_pred HHHHHHHHHHHHHHHHHHhcCCCCEEEEECCc-cchhhHHHHHHH---Hh---CCCccccCChHHH-HHHHH
Confidence 333344444444444444456 8899999998 556777777774 33 3344445667777 55554
No 63
>1ble_A Fructose permease; phosphotransferase, sugar transport; 2.90A {Bacillus subtilis} SCOP: c.38.1.1
Probab=29.50 E-value=26 Score=27.27 Aligned_cols=52 Identities=12% Similarity=0.107 Sum_probs=39.5
Q ss_pred HHHHHHHHHHhCCCEEEEEcccccccHHHHHHHHHHHHHHhcCCceEEEecCCchh
Q psy6720 100 GSIARMSAINENINKVVFVGNFLRVNPISMKLLAYAMDYWSKGTQKALFLEHEVCI 155 (182)
Q Consensus 100 g~la~l~A~~~~i~~Ivf~G~~i~~~~~~m~~i~~ai~yws~g~~~alFl~h~gyl 155 (182)
||.+..-++..++++|+.+-.-+.++|..+.++.-| ...+++..|+.-+..+
T Consensus 16 GQV~t~W~~~~~~~~IiVvnD~vA~D~~~k~~lk~a----~P~gvk~~i~sve~ai 67 (163)
T 1ble_A 16 GQILTRWIKVHAADRIIVVSDDIAQDEMRKTLILSV----APSNVKASAVSVSKMA 67 (163)
T ss_dssp TTHHHHHHHHHTCSEEEEECHHHHHCHHHHHHHHTS----SCTTSEEEEECHHHHH
T ss_pred hhheeeeccccCCCEEEEeCccccCCHHHHHHHHhh----CCCCCeEEEEEHHHHH
Confidence 789999999999999999999999999877776643 1245565555444433
No 64
>1bdg_A Hexokinase; phosphotransferase; HET: GLC; 2.60A {Schistosoma mansoni} SCOP: c.55.1.3 c.55.1.3
Probab=28.83 E-value=2.2e+02 Score=25.13 Aligned_cols=53 Identities=11% Similarity=0.028 Sum_probs=37.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhCCC--EEEEEcccccccHHHHHHHHHHHHHH
Q psy6720 87 LARATLVTITNNIGSIARMSAINENIN--KVVFVGNFLRVNPISMKLLAYAMDYW 139 (182)
Q Consensus 87 ia~SLl~Mv~~nIg~la~l~A~~~~i~--~Ivf~G~~i~~~~~~m~~i~~ai~yw 139 (182)
+|+.++.=.+.-++....-.....+.+ .|++.|..+..+|...+.+..+++-.
T Consensus 366 va~~V~~RaA~lla~~ia~i~~~~~~~~~~V~i~Ggv~~~~~~~~~~l~~~l~~~ 420 (451)
T 1bdg_A 366 ACEMVVKRAAYLAGAGIACILRRINRSEVTVGVDGSLYKFHPKFCERMTDMVDKL 420 (451)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHCCSEEEEEEESHHHHHCTTHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhCCCceEEEEeCchhcCchhHHHHHHHHHHHH
Confidence 666666655555555554455556778 67788999999998888888776644
No 65
>3lfj_A Manxb, phosphotransferase system, mannose/fructose/N- acetylgalactosamine-specific component...; manxb PTS; 1.56A {Thermoanaerobacter tengcongensis}
Probab=28.12 E-value=25 Score=28.19 Aligned_cols=50 Identities=12% Similarity=0.094 Sum_probs=38.4
Q ss_pred HHHHHHHHHHhCCCEEEEEcccccccHHHHHHHHHHHHHHhcCCceEEEecCCc
Q psy6720 100 GSIARMSAINENINKVVFVGNFLRVNPISMKLLAYAMDYWSKGTQKALFLEHEV 153 (182)
Q Consensus 100 g~la~l~A~~~~i~~Ivf~G~~i~~~~~~m~~i~~ai~yws~g~~~alFl~h~g 153 (182)
||++..-++..++++|+.+-.-+.++|+.+.++.-|. ..+++..|+.-+.
T Consensus 36 GQVat~W~k~~~~~~IiVvnD~vA~D~~~k~~lkmA~----P~gvk~~i~sve~ 85 (187)
T 3lfj_A 36 GQVMTRWMKGFPEASIVIIDDELAVDEFMKNIYTMAA----PPGVKVKVFGVDA 85 (187)
T ss_dssp TTHHHHHHTTCTTCEEEEECHHHHHCHHHHHHHHHTS----CTTCCEEEECHHH
T ss_pred hhhhheeccccCCCEEEEECccccCCHHHHHHHHHhc----cCCCeEEEEEHHH
Confidence 7999999999999999999999999998887776441 2355555544333
No 66
>3p3v_A PTS system, N-acetylgalactosamine-specific IIB CO; PTS IIB component, phosphotransferase, sugar transport, STRU genomics; HET: PGE; 1.65A {Streptococcus pyogenes serotype M1} SCOP: c.38.1.0
Probab=22.50 E-value=36 Score=26.52 Aligned_cols=50 Identities=14% Similarity=0.165 Sum_probs=38.6
Q ss_pred HHHHHHHHHHhCCCEEEEEcccccccHHHHHHHHHHHHHHhcCCceEEEecCCch
Q psy6720 100 GSIARMSAINENINKVVFVGNFLRVNPISMKLLAYAMDYWSKGTQKALFLEHEVC 154 (182)
Q Consensus 100 g~la~l~A~~~~i~~Ivf~G~~i~~~~~~m~~i~~ai~yws~g~~~alFl~h~gy 154 (182)
|| +..-++..++++|+.+-.-+.++|..+.++.-| -..+++..|+.-+..
T Consensus 19 GQ-~~~W~k~~~~~~IiVvnD~vA~D~~~k~~lk~A----~P~gvk~~i~sve~a 68 (163)
T 3p3v_A 19 GQ-GQLWVKFLNCNTVIVANDAVSEDKIQQSLMKTV----IPSSIAIRFFSIQKV 68 (163)
T ss_dssp ST-HHHHHHHTTCSEEEEECHHHHHCHHHHHHHGGG----SCTTSEEEEECHHHH
T ss_pred hh-hhhhhhhcCCCEEEEEcccccCCHHHHHHHHhh----CCCCceEEEEEHHHH
Confidence 78 899999999999999999999999887776644 124566666555443
No 67
>3sk3_A Acetate kinase, acetokinase; actin-like ATPase domain, askha superfamily of phosphotransf acetokinase, ATP binding, phosphotransferase; HET: CIT; 1.90A {Salmonella enterica subsp} PDB: 3slc_A
Probab=22.15 E-value=72 Score=28.58 Aligned_cols=105 Identities=14% Similarity=0.108 Sum_probs=59.9
Q ss_pred cCCCCHHHHHHHHhcCCCCCCcceeccccCCC-C-CCcccccccccccccccccCCCHHHHHHHHHHHHHHHH-HHHHHH
Q psy6720 29 TGCNSFEEAIELATSGDNTKVDKLVRDIYGGS-Y-ERFLGMFSFGHMNSKEKRESVSREDLARATLVTITNNI-GSIARM 105 (182)
Q Consensus 29 tg~~~f~ei~~lA~~Gd~~~vDllV~DIyg~~-~-~~lgiASsFGK~~~~~~~~~~~~eDia~SLl~Mv~~nI-g~la~l 105 (182)
+|.-|+..++.|.+++..+ .|=+-+=+|+.+ . .-.|+.+-+=.+ ++ .....+ -|+-.+.|+++.| -+++.+
T Consensus 259 sGdiDp~~l~~l~~~~g~s-~~ei~~~Lnk~SGLlglsG~S~D~R~l---e~-~~~gd~-~A~lA~d~f~yri~k~IGa~ 332 (415)
T 3sk3_A 259 SGDIDPAIIFHLHDTLGMS-VDQINKMLTKESGLLGLTEVTSDCRYV---ED-NYATKE-DAKRAMDVYCHRLAKYIGSY 332 (415)
T ss_dssp -CCCCHHHHHHHHHHHTCC-HHHHHHHC------CCSTTTTCGGGCS---SC-CCCCHH-HHHHHHHHHHHHHHHHHHHG
T ss_pred CCCCChHHHHHHHHhcCCC-HHHHHHHHhcCcCcccccCCcchHHHH---HH-HHcCCH-hHHHHHHHHHHHHHHHHHHH
Confidence 5667999999999876532 121111123321 1 111122222212 11 112333 4666677777666 567788
Q ss_pred HHHHhC-CCEEEEEcccccccHHHHHHHHHHHHHH
Q psy6720 106 SAINEN-INKVVFVGNFLRVNPISMKLLAYAMDYW 139 (182)
Q Consensus 106 ~A~~~~-i~~Ivf~G~~i~~~~~~m~~i~~ai~yw 139 (182)
+|.+.| ++-|||+|.-=-|.+.+.+.+...+.|.
T Consensus 333 aa~L~G~vDaIVFTgGIGEns~~vR~~v~~~l~~l 367 (415)
T 3sk3_A 333 TALMDGRLDAVVFTGGIGENAAMVRELSLGKLGVL 367 (415)
T ss_dssp GGGSTTCCCEEEEEHHHHTTCHHHHHHHHHTCGGG
T ss_pred HHHhCCCCCEEEECCccccCCHHHHHHHHhhchhc
Confidence 888888 9999999998778887777776666655
Done!