BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy6726
(184 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|1W0E|A Chain A, Crystal Structure Of Human Cytochrome P450 3a4
pdb|1W0F|A Chain A, Crystal Structure Of Human Cytochrome P450 3a4
pdb|1W0G|A Chain A, Crystal Structure Of Human Cytochrome P450 3a4
pdb|2J0D|A Chain A, Crystal Structure Of Human P450 3a4 In Complex With
Erythromycin
pdb|2J0D|B Chain B, Crystal Structure Of Human P450 3a4 In Complex With
Erythromycin
pdb|2V0M|A Chain A, Crystal Structure Of Human P450 3a4 In Complex With
Ketoconazole
pdb|2V0M|B Chain B, Crystal Structure Of Human P450 3a4 In Complex With
Ketoconazole
pdb|2V0M|C Chain C, Crystal Structure Of Human P450 3a4 In Complex With
Ketoconazole
pdb|2V0M|D Chain D, Crystal Structure Of Human P450 3a4 In Complex With
Ketoconazole
pdb|3NXU|A Chain A, Crystal Structure Of Human Cytochrome P4503a4 Bound To An
Inhibitor Ritonavir
pdb|3NXU|B Chain B, Crystal Structure Of Human Cytochrome P4503a4 Bound To An
Inhibitor Ritonavir
Length = 485
Score = 84.7 bits (208), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 44/97 (45%), Positives = 61/97 (62%), Gaps = 2/97 (2%)
Query: 2 VYPSVLEEIDRVLGRNTTHCPSYEDLCQLEYLECVIKETLRLFPAAPLIGRHIDEDFILD 61
V + EEID VL P+Y+ + Q+EYL+ V+ ETLRLFP A + R +D ++
Sbjct: 305 VQQKLQEEIDAVLPNKAP--PTYDTVLQMEYLDMVVNETLRLFPIAMRLERVCKKDVEIN 362
Query: 62 GLTIPAGVTVLISIYALHRDPKYYPSPGRFDPSRWMR 98
G+ IP GV V+I YALHRDPKY+ P +F P R+ +
Sbjct: 363 GMFIPKGVVVMIPSYALHRDPKYWTEPEKFLPERFSK 399
Score = 47.8 bits (112), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 26/59 (44%), Positives = 37/59 (62%), Gaps = 2/59 (3%)
Query: 123 EEIDRVLGRNTTHCPSYEDLCQLEYLECVIKETLRLFPAAPLIGRHIDEDFILDGLTIP 181
EEID VL P+Y+ + Q+EYL+ V+ ETLRLFP A + R +D ++G+ IP
Sbjct: 311 EEIDAVLPNKAP--PTYDTVLQMEYLDMVVNETLRLFPIAMRLERVCKKDVEINGMFIP 367
>pdb|1TQN|A Chain A, Crystal Structure Of Human Microsomal P450 3a4
Length = 486
Score = 84.7 bits (208), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 44/97 (45%), Positives = 61/97 (62%), Gaps = 2/97 (2%)
Query: 2 VYPSVLEEIDRVLGRNTTHCPSYEDLCQLEYLECVIKETLRLFPAAPLIGRHIDEDFILD 61
V + EEID VL P+Y+ + Q+EYL+ V+ ETLRLFP A + R +D ++
Sbjct: 306 VQQKLQEEIDAVLPNKAP--PTYDTVLQMEYLDMVVNETLRLFPIAMRLERVCKKDVEIN 363
Query: 62 GLTIPAGVTVLISIYALHRDPKYYPSPGRFDPSRWMR 98
G+ IP GV V+I YALHRDPKY+ P +F P R+ +
Sbjct: 364 GMFIPKGVVVMIPSYALHRDPKYWTEPEKFLPERFSK 400
Score = 47.8 bits (112), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 26/59 (44%), Positives = 37/59 (62%), Gaps = 2/59 (3%)
Query: 123 EEIDRVLGRNTTHCPSYEDLCQLEYLECVIKETLRLFPAAPLIGRHIDEDFILDGLTIP 181
EEID VL P+Y+ + Q+EYL+ V+ ETLRLFP A + R +D ++G+ IP
Sbjct: 312 EEIDAVLPNKAP--PTYDTVLQMEYLDMVVNETLRLFPIAMRLERVCKKDVEINGMFIP 368
>pdb|3UA1|A Chain A, Crystal Structure Of The Cytochrome
P4503a4-Bromoergocryptine Complex
pdb|3TJS|A Chain A, Crystal Structure Of The Complex Between Human Cytochrome
P450 3a4 And Desthiazolylmethyloxycarbonyl Ritonavir
Length = 487
Score = 84.7 bits (208), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 44/97 (45%), Positives = 61/97 (62%), Gaps = 2/97 (2%)
Query: 2 VYPSVLEEIDRVLGRNTTHCPSYEDLCQLEYLECVIKETLRLFPAAPLIGRHIDEDFILD 61
V + EEID VL P+Y+ + Q+EYL+ V+ ETLRLFP A + R +D ++
Sbjct: 307 VQQKLQEEIDAVLPNKAP--PTYDTVLQMEYLDMVVNETLRLFPIAMRLERVCKKDVEIN 364
Query: 62 GLTIPAGVTVLISIYALHRDPKYYPSPGRFDPSRWMR 98
G+ IP GV V+I YALHRDPKY+ P +F P R+ +
Sbjct: 365 GMFIPKGVVVMIPSYALHRDPKYWTEPEKFLPERFSK 401
Score = 47.8 bits (112), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 26/59 (44%), Positives = 37/59 (62%), Gaps = 2/59 (3%)
Query: 123 EEIDRVLGRNTTHCPSYEDLCQLEYLECVIKETLRLFPAAPLIGRHIDEDFILDGLTIP 181
EEID VL P+Y+ + Q+EYL+ V+ ETLRLFP A + R +D ++G+ IP
Sbjct: 313 EEIDAVLPNKAP--PTYDTVLQMEYLDMVVNETLRLFPIAMRLERVCKKDVEINGMFIP 369
>pdb|3C6G|A Chain A, Crystal Structure Of Cyp2r1 In Complex With Vitamin D3
pdb|3C6G|B Chain B, Crystal Structure Of Cyp2r1 In Complex With Vitamin D3
pdb|3DL9|A Chain A, Crystal Structure Of Cyp2r1 In Complex With
1-Alpha-Hydroxy- Vitamin D2
pdb|3DL9|B Chain B, Crystal Structure Of Cyp2r1 In Complex With
1-Alpha-Hydroxy- Vitamin D2
Length = 479
Score = 68.9 bits (167), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 36/94 (38%), Positives = 55/94 (58%), Gaps = 3/94 (3%)
Query: 5 SVLEEIDRVLGRNTTHCPSYEDLCQLEYLECVIKETLRLFPAAPL-IGRHIDEDFILDGL 63
V +EID ++G N PS++D C++ Y E V+ E LR PL I ED ++ G
Sbjct: 309 QVQKEIDLIMGPNGK--PSWDDKCKMPYTEAVLHEVLRFCNIVPLGIFHATSEDAVVRGY 366
Query: 64 TIPAGVTVLISIYALHRDPKYYPSPGRFDPSRWM 97
+IP G TV+ ++Y++H D KY+ P F P R++
Sbjct: 367 SIPKGTTVITNLYSVHFDEKYWRDPEVFHPERFL 400
Score = 41.6 bits (96), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 24/62 (38%), Positives = 35/62 (56%), Gaps = 3/62 (4%)
Query: 121 VLEEIDRVLGRNTTHCPSYEDLCQLEYLECVIKETLRLFPAAPL-IGRHIDEDFILDGLT 179
V +EID ++G N PS++D C++ Y E V+ E LR PL I ED ++ G +
Sbjct: 310 VQKEIDLIMGPNGK--PSWDDKCKMPYTEAVLHEVLRFCNIVPLGIFHATSEDAVVRGYS 367
Query: 180 IP 181
IP
Sbjct: 368 IP 369
>pdb|3CZH|A Chain A, Crystal Structure Of Cyp2r1 In Complex With Vitamin D2
pdb|3CZH|B Chain B, Crystal Structure Of Cyp2r1 In Complex With Vitamin D2
Length = 481
Score = 68.9 bits (167), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 36/94 (38%), Positives = 55/94 (58%), Gaps = 3/94 (3%)
Query: 5 SVLEEIDRVLGRNTTHCPSYEDLCQLEYLECVIKETLRLFPAAPL-IGRHIDEDFILDGL 63
V +EID ++G N PS++D C++ Y E V+ E LR PL I ED ++ G
Sbjct: 309 QVQKEIDLIMGPNGK--PSWDDKCKMPYTEAVLHEVLRFCNIVPLGIFHATSEDAVVRGY 366
Query: 64 TIPAGVTVLISIYALHRDPKYYPSPGRFDPSRWM 97
+IP G TV+ ++Y++H D KY+ P F P R++
Sbjct: 367 SIPKGTTVITNLYSVHFDEKYWRDPEVFHPERFL 400
Score = 41.6 bits (96), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 24/62 (38%), Positives = 35/62 (56%), Gaps = 3/62 (4%)
Query: 121 VLEEIDRVLGRNTTHCPSYEDLCQLEYLECVIKETLRLFPAAPL-IGRHIDEDFILDGLT 179
V +EID ++G N PS++D C++ Y E V+ E LR PL I ED ++ G +
Sbjct: 310 VQKEIDLIMGPNGK--PSWDDKCKMPYTEAVLHEVLRFCNIVPLGIFHATSEDAVVRGYS 367
Query: 180 IP 181
IP
Sbjct: 368 IP 369
>pdb|3MZS|A Chain A, Crystal Structure Of Cytochrome P450 Cyp11a1 In Complex
With 22- Hydroxy-Cholesterol
pdb|3MZS|B Chain B, Crystal Structure Of Cytochrome P450 Cyp11a1 In Complex
With 22- Hydroxy-Cholesterol
pdb|3MZS|C Chain C, Crystal Structure Of Cytochrome P450 Cyp11a1 In Complex
With 22- Hydroxy-Cholesterol
pdb|3MZS|D Chain D, Crystal Structure Of Cytochrome P450 Cyp11a1 In Complex
With 22- Hydroxy-Cholesterol
Length = 486
Score = 66.2 bits (160), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 29/65 (44%), Positives = 43/65 (66%)
Query: 33 LECVIKETLRLFPAAPLIGRHIDEDFILDGLTIPAGVTVLISIYALHRDPKYYPSPGRFD 92
L+ IKETLRL P + + R+ + D +L IPA V ++IYA+ RDP ++ SP +FD
Sbjct: 338 LKASIKETLRLHPISVTLQRYPESDLVLQDYLIPAKTLVQVAIYAMGRDPAFFSSPDKFD 397
Query: 93 PSRWM 97
P+RW+
Sbjct: 398 PTRWL 402
Score = 30.8 bits (68), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 15/35 (42%), Positives = 21/35 (60%)
Query: 148 LECVIKETLRLFPAAPLIGRHIDEDFILDGLTIPA 182
L+ IKETLRL P + + R+ + D +L IPA
Sbjct: 338 LKASIKETLRLHPISVTLQRYPESDLVLQDYLIPA 372
>pdb|2Q9F|A Chain A, Crystal Structure Of Human Cytochrome P450 46a1 In Complex
With Cholesterol-3-Sulphate
pdb|2Q9G|A Chain A, Crystal Structure Of Human Cytochrome P450 46a1
pdb|3MDM|A Chain A, Thioperamide Complex Of Cytochrome P450 46a1
pdb|3MDR|A Chain A, Tranylcypromine Complex Of Cytochrome P450 46a1
pdb|3MDR|B Chain B, Tranylcypromine Complex Of Cytochrome P450 46a1
pdb|3MDT|A Chain A, Voriconazole Complex Of Cytochrome P450 46a1
pdb|3MDT|B Chain B, Voriconazole Complex Of Cytochrome P450 46a1
pdb|3MDV|A Chain A, Clotrimazole Complex Of Cytochrome P450 46a1
pdb|3MDV|B Chain B, Clotrimazole Complex Of Cytochrome P450 46a1
pdb|4ENH|A Chain A, Crystal Structure Of Human Cytochrome P450 Cyp46a1 With
Fluvoxamine Bound
pdb|4FIA|A Chain A, Crystal Structure Of Human Cyp46a1 P450 With Bicalutamide
Bound
Length = 456
Score = 63.9 bits (154), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 32/88 (36%), Positives = 53/88 (60%), Gaps = 2/88 (2%)
Query: 9 EIDRVLGRNTTHCPSYEDLCQLEYLECVIKETLRLFPAAPLIGRHIDEDFILDGLTIPAG 68
E+D V+G + +EDL +L+YL V+KE+LRL+P A R ++E+ ++DG+ +P
Sbjct: 283 EVDEVIG--SKRYLDFEDLGRLQYLSQVLKESLRLYPPAWGTFRLLEEETLIDGVRVPGN 340
Query: 69 VTVLISIYALHRDPKYYPSPGRFDPSRW 96
+L S Y + R Y+ P F+P R+
Sbjct: 341 TPLLFSTYVMGRMDTYFEDPLTFNPDRF 368
Score = 47.0 bits (110), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 23/59 (38%), Positives = 39/59 (66%), Gaps = 2/59 (3%)
Query: 124 EIDRVLGRNTTHCPSYEDLCQLEYLECVIKETLRLFPAAPLIGRHIDEDFILDGLTIPA 182
E+D V+G + +EDL +L+YL V+KE+LRL+P A R ++E+ ++DG+ +P
Sbjct: 283 EVDEVIG--SKRYLDFEDLGRLQYLSQVLKESLRLYPPAWGTFRLLEEETLIDGVRVPG 339
>pdb|4DVQ|A Chain A, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Deoxycorticosterone
pdb|4DVQ|B Chain B, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Deoxycorticosterone
pdb|4DVQ|C Chain C, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Deoxycorticosterone
pdb|4DVQ|D Chain D, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Deoxycorticosterone
pdb|4DVQ|E Chain E, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Deoxycorticosterone
pdb|4DVQ|F Chain F, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Deoxycorticosterone
pdb|4DVQ|G Chain G, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Deoxycorticosterone
pdb|4DVQ|H Chain H, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Deoxycorticosterone
pdb|4DVQ|I Chain I, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Deoxycorticosterone
pdb|4DVQ|J Chain J, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Deoxycorticosterone
pdb|4DVQ|K Chain K, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Deoxycorticosterone
pdb|4DVQ|L Chain L, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Deoxycorticosterone
pdb|4FDH|A Chain A, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Fadrozole
pdb|4FDH|B Chain B, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Fadrozole
pdb|4FDH|C Chain C, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Fadrozole
pdb|4FDH|D Chain D, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Fadrozole
pdb|4FDH|E Chain E, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Fadrozole
pdb|4FDH|F Chain F, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Fadrozole
pdb|4FDH|G Chain G, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Fadrozole
pdb|4FDH|H Chain H, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Fadrozole
pdb|4FDH|I Chain I, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Fadrozole
pdb|4FDH|J Chain J, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Fadrozole
pdb|4FDH|K Chain K, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Fadrozole
pdb|4FDH|L Chain L, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Fadrozole
Length = 483
Score = 63.5 bits (153), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 28/76 (36%), Positives = 42/76 (55%)
Query: 28 CQLEYLECVIKETLRLFPAAPLIGRHIDEDFILDGLTIPAGVTVLISIYALHRDPKYYPS 87
+L L +KETLRL+P + R + D +L IPAG V + +Y+L R+ +P
Sbjct: 334 TELPLLRAALKETLRLYPVGLFLERVVSSDLVLQNYHIPAGTLVQVFLYSLGRNAALFPR 393
Query: 88 PGRFDPSRWMRFRFRG 103
P R++P RW+ R G
Sbjct: 394 PERYNPQRWLDIRGSG 409
Score = 32.7 bits (73), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 15/40 (37%), Positives = 21/40 (52%)
Query: 143 CQLEYLECVIKETLRLFPAAPLIGRHIDEDFILDGLTIPA 182
+L L +KETLRL+P + R + D +L IPA
Sbjct: 334 TELPLLRAALKETLRLYPVGLFLERVVSSDLVLQNYHIPA 373
>pdb|3N9Y|A Chain A, Crystal Structure Of Human Cyp11a1 In Complex With
Cholesterol
pdb|3N9Y|B Chain B, Crystal Structure Of Human Cyp11a1 In Complex With
Cholesterol
pdb|3N9Z|A Chain A, Crystal Structure Of Human Cyp11a1 In Complex With 22-
Hydroxycholesterol
pdb|3N9Z|B Chain B, Crystal Structure Of Human Cyp11a1 In Complex With 22-
Hydroxycholesterol
pdb|3NA1|A Chain A, Crystal Structure Of Human Cyp11a1 In Complex With 20-
Hydroxycholesterol
pdb|3NA1|B Chain B, Crystal Structure Of Human Cyp11a1 In Complex With 20-
Hydroxycholesterol
Length = 487
Score = 61.2 bits (147), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 28/65 (43%), Positives = 41/65 (63%)
Query: 33 LECVIKETLRLFPAAPLIGRHIDEDFILDGLTIPAGVTVLISIYALHRDPKYYPSPGRFD 92
L+ IKETLRL P + + R++ D +L IPA V ++IYAL R+P ++ P FD
Sbjct: 337 LKASIKETLRLHPISVTLQRYLVNDLVLRDYMIPAKTLVQVAIYALGREPTFFFDPENFD 396
Query: 93 PSRWM 97
P+RW+
Sbjct: 397 PTRWL 401
Score = 30.8 bits (68), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 15/35 (42%), Positives = 21/35 (60%)
Query: 148 LECVIKETLRLFPAAPLIGRHIDEDFILDGLTIPA 182
L+ IKETLRL P + + R++ D +L IPA
Sbjct: 337 LKASIKETLRLHPISVTLQRYLVNDLVLRDYMIPA 371
>pdb|3NA0|A Chain A, Crystal Structure Of Human Cyp11a1 In Complex With 20,22-
Dihydroxycholesterol
pdb|3NA0|B Chain B, Crystal Structure Of Human Cyp11a1 In Complex With 20,22-
Dihydroxycholesterol
Length = 471
Score = 60.8 bits (146), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 28/65 (43%), Positives = 41/65 (63%)
Query: 33 LECVIKETLRLFPAAPLIGRHIDEDFILDGLTIPAGVTVLISIYALHRDPKYYPSPGRFD 92
L+ IKETLRL P + + R++ D +L IPA V ++IYAL R+P ++ P FD
Sbjct: 334 LKASIKETLRLHPISVTLQRYLVNDLVLRDYMIPAKTLVQVAIYALGREPTFFFDPENFD 393
Query: 93 PSRWM 97
P+RW+
Sbjct: 394 PTRWL 398
Score = 30.8 bits (68), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 15/35 (42%), Positives = 21/35 (60%)
Query: 148 LECVIKETLRLFPAAPLIGRHIDEDFILDGLTIPA 182
L+ IKETLRL P + + R++ D +L IPA
Sbjct: 334 LKASIKETLRLHPISVTLQRYLVNDLVLRDYMIPA 368
>pdb|3EBS|A Chain A, Human Cytochrome P450 2a6 I208sI300FG301AS369G IN COMPLEX
With Phenacetin
pdb|3EBS|B Chain B, Human Cytochrome P450 2a6 I208sI300FG301AS369G IN COMPLEX
With Phenacetin
pdb|3EBS|C Chain C, Human Cytochrome P450 2a6 I208sI300FG301AS369G IN COMPLEX
With Phenacetin
pdb|3EBS|D Chain D, Human Cytochrome P450 2a6 I208sI300FG301AS369G IN COMPLEX
With Phenacetin
pdb|3T3Q|A Chain A, Human Cytochrome P450 2a6 I208sI300FG301AS369G IN COMPLEX
WITH Pilocarpine
pdb|3T3Q|B Chain B, Human Cytochrome P450 2a6 I208sI300FG301AS369G IN COMPLEX
WITH Pilocarpine
pdb|3T3Q|C Chain C, Human Cytochrome P450 2a6 I208sI300FG301AS369G IN COMPLEX
WITH Pilocarpine
pdb|3T3Q|D Chain D, Human Cytochrome P450 2a6 I208sI300FG301AS369G IN COMPLEX
WITH Pilocarpine
Length = 476
Score = 60.8 bits (146), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 33/108 (30%), Positives = 56/108 (51%), Gaps = 3/108 (2%)
Query: 2 VYPSVLEEIDRVLGRNTTHCPSYEDLCQLEYLECVIKETLRLFPAAPL-IGRHIDEDFIL 60
V V EEIDRV+G+N P +ED ++ Y+E VI E R P+ + R + +D
Sbjct: 301 VEAKVHEEIDRVIGKN--RQPKFEDRAKMPYMEAVIHEIQRFGDVIPMGLARRVKKDTKF 358
Query: 61 DGLTIPAGVTVLISIYALHRDPKYYPSPGRFDPSRWMRFRFRGDKTSA 108
+P G V + ++ RDP ++ +P F+P ++ + + K+ A
Sbjct: 359 RDFFLPKGTEVYPMLGSVLRDPSFFSNPQDFNPQHFLNEKGQFKKSDA 406
Score = 40.8 bits (94), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 21/53 (39%), Positives = 31/53 (58%), Gaps = 3/53 (5%)
Query: 121 VLEEIDRVLGRNTTHCPSYEDLCQLEYLECVIKETLRLFPAAPL-IGRHIDED 172
V EEIDRV+G+N P +ED ++ Y+E VI E R P+ + R + +D
Sbjct: 305 VHEEIDRVIGKN--RQPKFEDRAKMPYMEAVIHEIQRFGDVIPMGLARRVKKD 355
>pdb|2PG5|A Chain A, Crystal Structure Of Human Microsomal P450 2a6 N297q
pdb|2PG5|B Chain B, Crystal Structure Of Human Microsomal P450 2a6 N297q
pdb|2PG5|C Chain C, Crystal Structure Of Human Microsomal P450 2a6 N297q
pdb|2PG5|D Chain D, Crystal Structure Of Human Microsomal P450 2a6 N297q
Length = 476
Score = 60.5 bits (145), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 33/108 (30%), Positives = 56/108 (51%), Gaps = 3/108 (2%)
Query: 2 VYPSVLEEIDRVLGRNTTHCPSYEDLCQLEYLECVIKETLRLFPAAPL-IGRHIDEDFIL 60
V V EEIDRV+G+N P +ED ++ Y+E VI E R P+ + R + +D
Sbjct: 301 VEAKVHEEIDRVIGKN--RQPKFEDRAKMPYMEAVIHEIQRFGDVIPMSLARRVKKDTKF 358
Query: 61 DGLTIPAGVTVLISIYALHRDPKYYPSPGRFDPSRWMRFRFRGDKTSA 108
+P G V + ++ RDP ++ +P F+P ++ + + K+ A
Sbjct: 359 RDFFLPKGTEVYPMLGSVLRDPSFFSNPQDFNPQHFLNEKGQFKKSDA 406
Score = 40.8 bits (94), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 21/53 (39%), Positives = 31/53 (58%), Gaps = 3/53 (5%)
Query: 121 VLEEIDRVLGRNTTHCPSYEDLCQLEYLECVIKETLRLFPAAPL-IGRHIDED 172
V EEIDRV+G+N P +ED ++ Y+E VI E R P+ + R + +D
Sbjct: 305 VHEEIDRVIGKN--RQPKFEDRAKMPYMEAVIHEIQRFGDVIPMSLARRVKKD 355
>pdb|2PG7|A Chain A, Crystal Structure Of Human Microsomal P450 2a6 N297qI300V
pdb|2PG7|B Chain B, Crystal Structure Of Human Microsomal P450 2a6 N297qI300V
pdb|2PG7|C Chain C, Crystal Structure Of Human Microsomal P450 2a6 N297qI300V
pdb|2PG7|D Chain D, Crystal Structure Of Human Microsomal P450 2a6 N297qI300V
Length = 476
Score = 60.5 bits (145), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 33/108 (30%), Positives = 56/108 (51%), Gaps = 3/108 (2%)
Query: 2 VYPSVLEEIDRVLGRNTTHCPSYEDLCQLEYLECVIKETLRLFPAAPL-IGRHIDEDFIL 60
V V EEIDRV+G+N P +ED ++ Y+E VI E R P+ + R + +D
Sbjct: 301 VEAKVHEEIDRVIGKN--RQPKFEDRAKMPYMEAVIHEIQRFGDVIPMSLARRVKKDTKF 358
Query: 61 DGLTIPAGVTVLISIYALHRDPKYYPSPGRFDPSRWMRFRFRGDKTSA 108
+P G V + ++ RDP ++ +P F+P ++ + + K+ A
Sbjct: 359 RDFFLPKGTEVYPMLGSVLRDPSFFSNPQDFNPQHFLNEKGQFKKSDA 406
Score = 40.8 bits (94), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 21/53 (39%), Positives = 31/53 (58%), Gaps = 3/53 (5%)
Query: 121 VLEEIDRVLGRNTTHCPSYEDLCQLEYLECVIKETLRLFPAAPL-IGRHIDED 172
V EEIDRV+G+N P +ED ++ Y+E VI E R P+ + R + +D
Sbjct: 305 VHEEIDRVIGKN--RQPKFEDRAKMPYMEAVIHEIQRFGDVIPMSLARRVKKD 355
>pdb|1Z10|A Chain A, Crystal Structure Of Human Microsomal P450 2a6 With
Coumarin Bound
pdb|1Z10|B Chain B, Crystal Structure Of Human Microsomal P450 2a6 With
Coumarin Bound
pdb|1Z10|C Chain C, Crystal Structure Of Human Microsomal P450 2a6 With
Coumarin Bound
pdb|1Z10|D Chain D, Crystal Structure Of Human Microsomal P450 2a6 With
Coumarin Bound
pdb|1Z11|A Chain A, Crystal Structure Of Human Microsomal P450 2a6 With
Methoxsalen Bound
pdb|1Z11|B Chain B, Crystal Structure Of Human Microsomal P450 2a6 With
Methoxsalen Bound
pdb|1Z11|C Chain C, Crystal Structure Of Human Microsomal P450 2a6 With
Methoxsalen Bound
pdb|1Z11|D Chain D, Crystal Structure Of Human Microsomal P450 2a6 With
Methoxsalen Bound
pdb|2FDU|A Chain A, Microsomal P450 2a6 With The Inhibitor N,N-Dimethyl(5-
(Pyridin-3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDU|B Chain B, Microsomal P450 2a6 With The Inhibitor N,N-Dimethyl(5-
(Pyridin-3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDU|C Chain C, Microsomal P450 2a6 With The Inhibitor N,N-Dimethyl(5-
(Pyridin-3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDU|D Chain D, Microsomal P450 2a6 With The Inhibitor N,N-Dimethyl(5-
(Pyridin-3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDV|A Chain A, Microsomal P450 2a6 With The Inhibitor
N-Methyl(5-(Pyridin- 3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDV|B Chain B, Microsomal P450 2a6 With The Inhibitor
N-Methyl(5-(Pyridin- 3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDV|C Chain C, Microsomal P450 2a6 With The Inhibitor
N-Methyl(5-(Pyridin- 3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDV|D Chain D, Microsomal P450 2a6 With The Inhibitor
N-Methyl(5-(Pyridin- 3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDW|A Chain A, Crystal Structure Of Human Microsomal P450 2a6 With The
Inhibitor (5-(Pyridin-3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDW|B Chain B, Crystal Structure Of Human Microsomal P450 2a6 With The
Inhibitor (5-(Pyridin-3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDW|C Chain C, Crystal Structure Of Human Microsomal P450 2a6 With The
Inhibitor (5-(Pyridin-3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDW|D Chain D, Crystal Structure Of Human Microsomal P450 2a6 With The
Inhibitor (5-(Pyridin-3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDY|A Chain A, Microsomal P450 2a6 With The Inhibitor Adrithiol Bound
pdb|2FDY|B Chain B, Microsomal P450 2a6 With The Inhibitor Adrithiol Bound
pdb|2FDY|C Chain C, Microsomal P450 2a6 With The Inhibitor Adrithiol Bound
pdb|2FDY|D Chain D, Microsomal P450 2a6 With The Inhibitor Adrithiol Bound
pdb|3T3R|A Chain A, Human Cytochrome P450 2a6 In Complex With Pilocarpine
pdb|3T3R|B Chain B, Human Cytochrome P450 2a6 In Complex With Pilocarpine
pdb|3T3R|C Chain C, Human Cytochrome P450 2a6 In Complex With Pilocarpine
pdb|3T3R|D Chain D, Human Cytochrome P450 2a6 In Complex With Pilocarpine
pdb|4EJJ|A Chain A, Human Cytochrome P450 2a6 In Complex With Nicotine
pdb|4EJJ|B Chain B, Human Cytochrome P450 2a6 In Complex With Nicotine
pdb|4EJJ|C Chain C, Human Cytochrome P450 2a6 In Complex With Nicotine
pdb|4EJJ|D Chain D, Human Cytochrome P450 2a6 In Complex With Nicotine
Length = 476
Score = 60.5 bits (145), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 33/108 (30%), Positives = 56/108 (51%), Gaps = 3/108 (2%)
Query: 2 VYPSVLEEIDRVLGRNTTHCPSYEDLCQLEYLECVIKETLRLFPAAPL-IGRHIDEDFIL 60
V V EEIDRV+G+N P +ED ++ Y+E VI E R P+ + R + +D
Sbjct: 301 VEAKVHEEIDRVIGKN--RQPKFEDRAKMPYMEAVIHEIQRFGDVIPMSLARRVKKDTKF 358
Query: 61 DGLTIPAGVTVLISIYALHRDPKYYPSPGRFDPSRWMRFRFRGDKTSA 108
+P G V + ++ RDP ++ +P F+P ++ + + K+ A
Sbjct: 359 RDFFLPKGTEVYPMLGSVLRDPSFFSNPQDFNPQHFLNEKGQFKKSDA 406
Score = 40.8 bits (94), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 21/53 (39%), Positives = 31/53 (58%), Gaps = 3/53 (5%)
Query: 121 VLEEIDRVLGRNTTHCPSYEDLCQLEYLECVIKETLRLFPAAPL-IGRHIDED 172
V EEIDRV+G+N P +ED ++ Y+E VI E R P+ + R + +D
Sbjct: 305 VHEEIDRVIGKN--RQPKFEDRAKMPYMEAVIHEIQRFGDVIPMSLARRVKKD 355
>pdb|2PG6|A Chain A, Crystal Structure Of Human Microsomal P450 2a6 L240cN297Q
pdb|2PG6|B Chain B, Crystal Structure Of Human Microsomal P450 2a6 L240cN297Q
pdb|2PG6|C Chain C, Crystal Structure Of Human Microsomal P450 2a6 L240cN297Q
pdb|2PG6|D Chain D, Crystal Structure Of Human Microsomal P450 2a6 L240cN297Q
Length = 476
Score = 60.5 bits (145), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 33/108 (30%), Positives = 56/108 (51%), Gaps = 3/108 (2%)
Query: 2 VYPSVLEEIDRVLGRNTTHCPSYEDLCQLEYLECVIKETLRLFPAAPL-IGRHIDEDFIL 60
V V EEIDRV+G+N P +ED ++ Y+E VI E R P+ + R + +D
Sbjct: 301 VEAKVHEEIDRVIGKN--RQPKFEDRAKMPYMEAVIHEIQRFGDVIPMSLARRVKKDTKF 358
Query: 61 DGLTIPAGVTVLISIYALHRDPKYYPSPGRFDPSRWMRFRFRGDKTSA 108
+P G V + ++ RDP ++ +P F+P ++ + + K+ A
Sbjct: 359 RDFFLPKGTEVYPMLGSVLRDPSFFSNPQDFNPQHFLNEKGQFKKSDA 406
Score = 40.8 bits (94), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 21/53 (39%), Positives = 31/53 (58%), Gaps = 3/53 (5%)
Query: 121 VLEEIDRVLGRNTTHCPSYEDLCQLEYLECVIKETLRLFPAAPL-IGRHIDED 172
V EEIDRV+G+N P +ED ++ Y+E VI E R P+ + R + +D
Sbjct: 305 VHEEIDRVIGKN--RQPKFEDRAKMPYMEAVIHEIQRFGDVIPMSLARRVKKD 355
>pdb|3DBG|A Chain A, Crystal Structure Of Cytochrome P450 170a1 (Cyp170a1) From
Streptomyces Coelicolor
pdb|3DBG|B Chain B, Crystal Structure Of Cytochrome P450 170a1 (Cyp170a1) From
Streptomyces Coelicolor
pdb|3EL3|A Chain A, Distinct Monooxygenase And Farnesene Synthase Active Sites
In Cytochrome P450 170a1
pdb|3EL3|B Chain B, Distinct Monooxygenase And Farnesene Synthase Active Sites
In Cytochrome P450 170a1
Length = 467
Score = 60.1 bits (144), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 33/92 (35%), Positives = 50/92 (54%), Gaps = 3/92 (3%)
Query: 6 VLEEIDRVLGRNTTHCPSYEDLCQLEYLECVIKETLRLFPAAPLIGRHIDEDFILDGLTI 65
+ +E++ V G ++ED+ +L + VI E +RL PA ++ R + L G I
Sbjct: 300 IRDEVEAVTGGRPV---AFEDVRKLRHTGNVIVEAMRLRPAVWVLTRRAVAESELGGYRI 356
Query: 66 PAGVTVLISIYALHRDPKYYPSPGRFDPSRWM 97
PAG ++ S YA+ RDPK Y FDP RW+
Sbjct: 357 PAGADIIYSPYAIQRDPKSYDDNLEFDPDRWL 388
Score = 30.0 bits (66), Expect = 0.82, Method: Compositional matrix adjust.
Identities = 19/62 (30%), Positives = 32/62 (51%), Gaps = 3/62 (4%)
Query: 121 VLEEIDRVLGRNTTHCPSYEDLCQLEYLECVIKETLRLFPAAPLIGRHIDEDFILDGLTI 180
+ +E++ V G ++ED+ +L + VI E +RL PA ++ R + L G I
Sbjct: 300 IRDEVEAVTGGRPV---AFEDVRKLRHTGNVIVEAMRLRPAVWVLTRRAVAESELGGYRI 356
Query: 181 PA 182
PA
Sbjct: 357 PA 358
>pdb|2P85|A Chain A, Structure Of Human Lung Cytochrome P450 2a13 With Indole
Bound In Two Alternate Conformations
pdb|2P85|B Chain B, Structure Of Human Lung Cytochrome P450 2a13 With Indole
Bound In Two Alternate Conformations
pdb|2P85|C Chain C, Structure Of Human Lung Cytochrome P450 2a13 With Indole
Bound In Two Alternate Conformations
pdb|2P85|D Chain D, Structure Of Human Lung Cytochrome P450 2a13 With Indole
Bound In Two Alternate Conformations
pdb|2P85|E Chain E, Structure Of Human Lung Cytochrome P450 2a13 With Indole
Bound In Two Alternate Conformations
pdb|2P85|F Chain F, Structure Of Human Lung Cytochrome P450 2a13 With Indole
Bound In Two Alternate Conformations
pdb|3T3S|A Chain A, Human Cytochrome P450 2a13 In Complex With Pilocarpine
pdb|3T3S|B Chain B, Human Cytochrome P450 2a13 In Complex With Pilocarpine
pdb|3T3S|C Chain C, Human Cytochrome P450 2a13 In Complex With Pilocarpine
pdb|3T3S|D Chain D, Human Cytochrome P450 2a13 In Complex With Pilocarpine
pdb|3T3S|E Chain E, Human Cytochrome P450 2a13 In Complex With Pilocarpine
pdb|3T3S|F Chain F, Human Cytochrome P450 2a13 In Complex With Pilocarpine
pdb|3T3S|G Chain G, Human Cytochrome P450 2a13 In Complex With Pilocarpine
pdb|3T3S|H Chain H, Human Cytochrome P450 2a13 In Complex With Pilocarpine
pdb|4EJG|A Chain A, Human Cytochrome P450 2a13 In Complex With Nicotine
pdb|4EJG|B Chain B, Human Cytochrome P450 2a13 In Complex With Nicotine
pdb|4EJG|C Chain C, Human Cytochrome P450 2a13 In Complex With Nicotine
pdb|4EJG|D Chain D, Human Cytochrome P450 2a13 In Complex With Nicotine
pdb|4EJG|E Chain E, Human Cytochrome P450 2a13 In Complex With Nicotine
pdb|4EJG|F Chain F, Human Cytochrome P450 2a13 In Complex With Nicotine
pdb|4EJG|G Chain G, Human Cytochrome P450 2a13 In Complex With Nicotine
pdb|4EJG|H Chain H, Human Cytochrome P450 2a13 In Complex With Nicotine
pdb|4EJH|A Chain A, Human Cytochrome P450 2a13 In Complex With
4-(Methylnitrosamino)-1-(3- Pyridyl)-1-Butanone (Nnk)
pdb|4EJH|B Chain B, Human Cytochrome P450 2a13 In Complex With
4-(Methylnitrosamino)-1-(3- Pyridyl)-1-Butanone (Nnk)
pdb|4EJH|C Chain C, Human Cytochrome P450 2a13 In Complex With
4-(Methylnitrosamino)-1-(3- Pyridyl)-1-Butanone (Nnk)
pdb|4EJH|D Chain D, Human Cytochrome P450 2a13 In Complex With
4-(Methylnitrosamino)-1-(3- Pyridyl)-1-Butanone (Nnk)
pdb|4EJH|E Chain E, Human Cytochrome P450 2a13 In Complex With
4-(Methylnitrosamino)-1-(3- Pyridyl)-1-Butanone (Nnk)
pdb|4EJH|F Chain F, Human Cytochrome P450 2a13 In Complex With
4-(Methylnitrosamino)-1-(3- Pyridyl)-1-Butanone (Nnk)
pdb|4EJH|G Chain G, Human Cytochrome P450 2a13 In Complex With
4-(Methylnitrosamino)-1-(3- Pyridyl)-1-Butanone (Nnk)
pdb|4EJH|H Chain H, Human Cytochrome P450 2a13 In Complex With
4-(Methylnitrosamino)-1-(3- Pyridyl)-1-Butanone (Nnk)
pdb|4EJI|A Chain A, Human Cytochrome P450 2a13 In Complex With Two Molecules
Of 4- (Methylnitrosamino)-1-(3-Puridyl)-1-Butanone
Length = 476
Score = 58.2 bits (139), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 32/108 (29%), Positives = 56/108 (51%), Gaps = 3/108 (2%)
Query: 2 VYPSVLEEIDRVLGRNTTHCPSYEDLCQLEYLECVIKETLRLFPAAPL-IGRHIDEDFIL 60
V V EEIDRV+G+N P +ED ++ Y E VI E R P+ + +++D
Sbjct: 301 VEAKVHEEIDRVIGKN--RQPKFEDRAKMPYTEAVIHEIQRFGDMLPMGLAHRVNKDTKF 358
Query: 61 DGLTIPAGVTVLISIYALHRDPKYYPSPGRFDPSRWMRFRFRGDKTSA 108
+P G V + ++ RDP+++ +P F+P ++ + + K+ A
Sbjct: 359 RDFFLPKGTEVFPMLGSVLRDPRFFSNPRDFNPQHFLDKKGQFKKSDA 406
Score = 37.7 bits (86), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 20/53 (37%), Positives = 30/53 (56%), Gaps = 3/53 (5%)
Query: 121 VLEEIDRVLGRNTTHCPSYEDLCQLEYLECVIKETLRLFPAAPL-IGRHIDED 172
V EEIDRV+G+N P +ED ++ Y E VI E R P+ + +++D
Sbjct: 305 VHEEIDRVIGKN--RQPKFEDRAKMPYTEAVIHEIQRFGDMLPMGLAHRVNKD 355
>pdb|3CBD|A Chain A, Directed Evolution Of Cytochrome P450 Bm3, To Octane
Monoxygenase 139-3
pdb|3CBD|B Chain B, Directed Evolution Of Cytochrome P450 Bm3, To Octane
Monoxygenase 139-3
Length = 455
Score = 58.2 bits (139), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 58/169 (34%), Positives = 75/169 (44%), Gaps = 23/169 (13%)
Query: 2 VYPSVLEEIDRVLGRNTTHCPSYEDLCQLEYLECVIKETLRLFPAAPLIGRHIDEDFILD 61
V V EE RVL PSY+ + QL+Y+ V+ E LRL+P AP + ED +L
Sbjct: 286 VLQKVAEEATRVL---VDPVPSYKQVKQLKYVGMVLNEALRLWPTAPAFSLYAKEDTVLG 342
Query: 62 G-LTIPAGVTVLISIYALHRDPKYYPS------PGRF-DPSRWMRFRFR--GDKTSAPLL 111
G + G V++ I LHRD + P RF +PS + F+ G+ A
Sbjct: 343 GEYPLEKGDEVMVLIPQLHRDKTIWGDDVEEFRPERFENPSAIPQHAFKPFGNGQRA--- 399
Query: 112 ELPLIPTSFVLEEIDRVLGRNTTHCPSYEDLCQLEYLECVIKETLRLFP 160
I F L E VLG H +ED E IKETL L P
Sbjct: 400 ---CIGQQFALHEATLVLGMMLKHF-DFEDHTN---YELDIKETLTLKP 441
Score = 43.5 bits (101), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 31/86 (36%), Positives = 43/86 (50%), Gaps = 10/86 (11%)
Query: 99 FRFRGDKTSAPLLELPL---IPTSFVL----EEIDRVLGRNTTHCPSYEDLCQLEYLECV 151
F G +T++ LL L + VL EE RVL PSY+ + QL+Y+ V
Sbjct: 261 FLIAGHETTSGLLSFALYFLVKNPHVLQKVAEEATRVL---VDPVPSYKQVKQLKYVGMV 317
Query: 152 IKETLRLFPAAPLIGRHIDEDFILDG 177
+ E LRL+P AP + ED +L G
Sbjct: 318 LNEALRLWPTAPAFSLYAKEDTVLGG 343
>pdb|3PSX|A Chain A, Crystal Structure Of The Kt2 Mutant Of Cytochrome P450 Bm3
pdb|3PSX|B Chain B, Crystal Structure Of The Kt2 Mutant Of Cytochrome P450 Bm3
Length = 487
Score = 57.4 bits (137), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 60/193 (31%), Positives = 83/193 (43%), Gaps = 24/193 (12%)
Query: 2 VYPSVLEEIDRVLGRNTTHCPSYEDLCQLEYLECVIKETLRLFPAAPLIGRHIDEDFILD 61
V EE RVL PSY+ + QL+Y+ V+ E LRL+P AP + ED +L
Sbjct: 292 VLQKAAEEAARVL---VDPVPSYKQVKQLKYVGMVLNEALRLWPTAPAFSLYAKEDTVLG 348
Query: 62 G-LTIPAGVTVLISIYALHRDPKYYPS------PGRF-DPSRWMRFRFR--GDKTSAPLL 111
G + G +++ I LHRD + P RF +PS + F+ G+ A
Sbjct: 349 GEYPLEKGDEIMVLIPQLHRDKTIWGDDVEEFRPERFENPSAIPQHAFKPFGNGQRA--- 405
Query: 112 ELPLIPTSFVLEEIDRVLGRNTTHCPSYEDLCQLEYLECVIKETLRLFPAAPLIGRHIDE 171
I F L E VLG H +ED E IKETL L P + + +
Sbjct: 406 ---CIGQQFALHEATLVLGMMLKHF-DFEDHTN---YELDIKETLTLKPEG-FVVKAKSK 457
Query: 172 DFILDGLTIPAVE 184
L G+ P+ E
Sbjct: 458 KIPLGGIPSPSTE 470
>pdb|3K9V|A Chain A, Crystal Structure Of Rat Mitochondrial P450 24a1 S57d In
Complex With Chaps
pdb|3K9V|B Chain B, Crystal Structure Of Rat Mitochondrial P450 24a1 S57d In
Complex With Chaps
pdb|3K9Y|A Chain A, Crystal Structure Of Rat Mitochondrial P450 24a1 S57d In
Complex With Cymal-5
pdb|3K9Y|B Chain B, Crystal Structure Of Rat Mitochondrial P450 24a1 S57d In
Complex With Cymal-5
Length = 482
Score = 57.0 bits (136), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 32/110 (29%), Positives = 53/110 (48%), Gaps = 6/110 (5%)
Query: 6 VLEEIDRVLGRNTTHCPSYEDLCQLEYLECVIKETLRLFPAAPLIGRHIDEDFILDGLTI 65
+L+E+ VL N T P EDL + YL+ +KE++RL P+ P R +D+ +L +
Sbjct: 320 LLQEVQSVLPDNQT--PRAEDLRNMPYLKACLKESMRLTPSVPFTTRTLDKPTVLGEYAL 377
Query: 66 PAGVTVLISIYALHRDPKYYPSPGRFDPSRWMRFRFRGDKTSAPLLELPL 115
P G + ++ L + +F P RW+ + +K P LP
Sbjct: 378 PKGTVLTLNTQVLGSSEDNFEDSHKFRPERWL----QKEKKINPFAHLPF 423
Score = 41.6 bits (96), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 22/61 (36%), Positives = 35/61 (57%), Gaps = 2/61 (3%)
Query: 121 VLEEIDRVLGRNTTHCPSYEDLCQLEYLECVIKETLRLFPAAPLIGRHIDEDFILDGLTI 180
+L+E+ VL N T P EDL + YL+ +KE++RL P+ P R +D+ +L +
Sbjct: 320 LLQEVQSVLPDNQT--PRAEDLRNMPYLKACLKESMRLTPSVPFTTRTLDKPTVLGEYAL 377
Query: 181 P 181
P
Sbjct: 378 P 378
>pdb|3EKD|A Chain A, Crystal Structure Of The A264m Heme Domain Of Cytochrome
P450 Bm3
pdb|3EKD|B Chain B, Crystal Structure Of The A264m Heme Domain Of Cytochrome
P450 Bm3
Length = 470
Score = 56.6 bits (135), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 60/193 (31%), Positives = 83/193 (43%), Gaps = 24/193 (12%)
Query: 2 VYPSVLEEIDRVLGRNTTHCPSYEDLCQLEYLECVIKETLRLFPAAPLIGRHIDEDFILD 61
V EE RVL PSY+ + QL+Y+ V+ E LRL+P AP + ED +L
Sbjct: 286 VLQKAAEEAARVL---VDPVPSYKQVKQLKYVGMVLNEALRLWPTAPAFSLYAKEDTVLG 342
Query: 62 G-LTIPAGVTVLISIYALHRDPKYYPS------PGRF-DPSRWMRFRFR--GDKTSAPLL 111
G + G +++ I LHRD + P RF +PS + F+ G+ A
Sbjct: 343 GEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERFENPSAIPQHAFKPFGNGQRA--- 399
Query: 112 ELPLIPTSFVLEEIDRVLGRNTTHCPSYEDLCQLEYLECVIKETLRLFPAAPLIGRHIDE 171
I F L E VLG H +ED E IKETL L P + + +
Sbjct: 400 ---CIGQQFALHEATLVLGMMLKHF-DFEDHTN---YELDIKETLTLKPEG-FVVKAKSK 451
Query: 172 DFILDGLTIPAVE 184
L G+ P+ E
Sbjct: 452 KIPLGGIPSPSTE 464
>pdb|3BEN|A Chain A, Structure Of N-(12-Imidazolyl-Dodecanoyl)-L-Leucine
Inhibitor Bound To The Heme Domain Of Cytochrome
P450-Bm3
pdb|3BEN|B Chain B, Structure Of N-(12-Imidazolyl-Dodecanoyl)-L-Leucine
Inhibitor Bound To The Heme Domain Of Cytochrome
P450-Bm3
Length = 470
Score = 56.6 bits (135), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 60/193 (31%), Positives = 83/193 (43%), Gaps = 24/193 (12%)
Query: 2 VYPSVLEEIDRVLGRNTTHCPSYEDLCQLEYLECVIKETLRLFPAAPLIGRHIDEDFILD 61
V EE RVL PSY+ + QL+Y+ V+ E LRL+P AP + ED +L
Sbjct: 287 VLQKAAEEAARVL---VDPVPSYKQVKQLKYVGMVLNEALRLWPTAPAFSLYAKEDTVLG 343
Query: 62 G-LTIPAGVTVLISIYALHRDPKYYPS------PGRF-DPSRWMRFRFR--GDKTSAPLL 111
G + G +++ I LHRD + P RF +PS + F+ G+ A
Sbjct: 344 GEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERFENPSAIPQHAFKPFGNGQRA--- 400
Query: 112 ELPLIPTSFVLEEIDRVLGRNTTHCPSYEDLCQLEYLECVIKETLRLFPAAPLIGRHIDE 171
I F L E VLG H +ED E IKETL L P + + +
Sbjct: 401 ---CIGQQFALHEATLVLGMMLKHF-DFEDHTN---YELDIKETLTLKPEG-FVVKAKSK 452
Query: 172 DFILDGLTIPAVE 184
L G+ P+ E
Sbjct: 453 KIPLGGIPSPSTE 465
>pdb|2IJ2|A Chain A, Atomic Structure Of The Heme Domain Of Flavocytochrome
P450- Bm3
pdb|2IJ2|B Chain B, Atomic Structure Of The Heme Domain Of Flavocytochrome
P450- Bm3
Length = 470
Score = 56.6 bits (135), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 60/193 (31%), Positives = 83/193 (43%), Gaps = 24/193 (12%)
Query: 2 VYPSVLEEIDRVLGRNTTHCPSYEDLCQLEYLECVIKETLRLFPAAPLIGRHIDEDFILD 61
V EE RVL PSY+ + QL+Y+ V+ E LRL+P AP + ED +L
Sbjct: 286 VLQKAAEEAARVL---VDPVPSYKQVKQLKYVGMVLNEALRLWPTAPAFSLYAKEDTVLG 342
Query: 62 G-LTIPAGVTVLISIYALHRDPKYYPS------PGRF-DPSRWMRFRFR--GDKTSAPLL 111
G + G +++ I LHRD + P RF +PS + F+ G+ A
Sbjct: 343 GEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERFENPSAIPQHAFKPFGNGQRA--- 399
Query: 112 ELPLIPTSFVLEEIDRVLGRNTTHCPSYEDLCQLEYLECVIKETLRLFPAAPLIGRHIDE 171
I F L E VLG H +ED E IKETL L P + + +
Sbjct: 400 ---CIGQQFALHEATLVLGMMLKHF-DFEDHTN---YELDIKETLTLKPEG-FVVKAKSK 451
Query: 172 DFILDGLTIPAVE 184
L G+ P+ E
Sbjct: 452 KIPLGGIPSPSTE 464
>pdb|2NNB|A Chain A, The Q403k Mutnat Heme Domain Of Flavocytochrome P450 Bm3
pdb|2NNB|B Chain B, The Q403k Mutnat Heme Domain Of Flavocytochrome P450 Bm3
Length = 471
Score = 56.2 bits (134), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 60/193 (31%), Positives = 83/193 (43%), Gaps = 24/193 (12%)
Query: 2 VYPSVLEEIDRVLGRNTTHCPSYEDLCQLEYLECVIKETLRLFPAAPLIGRHIDEDFILD 61
V EE RVL PSY+ + QL+Y+ V+ E LRL+P AP + ED +L
Sbjct: 286 VLQKAAEEAARVL---VDPVPSYKQVKQLKYVGMVLNEALRLWPTAPAFSLYAKEDTVLG 342
Query: 62 G-LTIPAGVTVLISIYALHRDPKYYPS------PGRF-DPSRWMRFRFR--GDKTSAPLL 111
G + G +++ I LHRD + P RF +PS + F+ G+ A
Sbjct: 343 GEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERFENPSAIPQHAFKPFGNGQRA--- 399
Query: 112 ELPLIPTSFVLEEIDRVLGRNTTHCPSYEDLCQLEYLECVIKETLRLFPAAPLIGRHIDE 171
I F L E VLG H +ED E IKETL L P + + +
Sbjct: 400 ---CIGKQFALHEATLVLGMMLKHF-DFEDHTN---YELDIKETLTLKPEG-FVVKAKSK 451
Query: 172 DFILDGLTIPAVE 184
L G+ P+ E
Sbjct: 452 KIPLGGIPSPSTE 464
>pdb|2IJ4|A Chain A, Structure Of The A264k Mutant Of Cytochrome P450 Bm3
pdb|2IJ4|B Chain B, Structure Of The A264k Mutant Of Cytochrome P450 Bm3
Length = 470
Score = 56.2 bits (134), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 60/193 (31%), Positives = 83/193 (43%), Gaps = 24/193 (12%)
Query: 2 VYPSVLEEIDRVLGRNTTHCPSYEDLCQLEYLECVIKETLRLFPAAPLIGRHIDEDFILD 61
V EE RVL PSY+ + QL+Y+ V+ E LRL+P AP + ED +L
Sbjct: 286 VLQKAAEEAARVL---VDPVPSYKQVKQLKYVGMVLNEALRLWPTAPAFSLYAKEDTVLG 342
Query: 62 G-LTIPAGVTVLISIYALHRDPKYYPS------PGRF-DPSRWMRFRFR--GDKTSAPLL 111
G + G +++ I LHRD + P RF +PS + F+ G+ A
Sbjct: 343 GEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERFENPSAIPQHAFKPFGNGQRA--- 399
Query: 112 ELPLIPTSFVLEEIDRVLGRNTTHCPSYEDLCQLEYLECVIKETLRLFPAAPLIGRHIDE 171
I F L E VLG H +ED E IKETL L P + + +
Sbjct: 400 ---CIGQQFALHEATLVLGMMLKHF-DFEDHTN---YELDIKETLTLKPEG-FVVKAKSK 451
Query: 172 DFILDGLTIPAVE 184
L G+ P+ E
Sbjct: 452 KIPLGGIPSPSTE 464
>pdb|2HPD|A Chain A, Crystal Structure Of Hemoprotein Domain Of P450bm-3, A
Prototype For Microsomal P450's
pdb|2HPD|B Chain B, Crystal Structure Of Hemoprotein Domain Of P450bm-3, A
Prototype For Microsomal P450's
pdb|1FAG|A Chain A, Structure Of Cytochrome P450
pdb|1FAG|B Chain B, Structure Of Cytochrome P450
pdb|1FAG|C Chain C, Structure Of Cytochrome P450
pdb|1FAG|D Chain D, Structure Of Cytochrome P450
Length = 471
Score = 56.2 bits (134), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 60/193 (31%), Positives = 83/193 (43%), Gaps = 24/193 (12%)
Query: 2 VYPSVLEEIDRVLGRNTTHCPSYEDLCQLEYLECVIKETLRLFPAAPLIGRHIDEDFILD 61
V EE RVL PSY+ + QL+Y+ V+ E LRL+P AP + ED +L
Sbjct: 286 VLQKAAEEAARVL---VDPVPSYKQVKQLKYVGMVLNEALRLWPTAPAFSLYAKEDTVLG 342
Query: 62 G-LTIPAGVTVLISIYALHRDPKYYPS------PGRF-DPSRWMRFRFR--GDKTSAPLL 111
G + G +++ I LHRD + P RF +PS + F+ G+ A
Sbjct: 343 GEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERFENPSAIPQHAFKPFGNGQRA--- 399
Query: 112 ELPLIPTSFVLEEIDRVLGRNTTHCPSYEDLCQLEYLECVIKETLRLFPAAPLIGRHIDE 171
I F L E VLG H +ED E IKETL L P + + +
Sbjct: 400 ---CIGQQFALHEATLVLGMMLKHF-DFEDHTN---YELDIKETLTLKPEG-FVVKAKSK 451
Query: 172 DFILDGLTIPAVE 184
L G+ P+ E
Sbjct: 452 KIPLGGIPSPSTE 464
>pdb|3EKF|A Chain A, Crystal Structure Of The A264q Heme Domain Of Cytochrome
P450 Bm3
pdb|3EKF|B Chain B, Crystal Structure Of The A264q Heme Domain Of Cytochrome
P450 Bm3
Length = 470
Score = 56.2 bits (134), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 60/193 (31%), Positives = 83/193 (43%), Gaps = 24/193 (12%)
Query: 2 VYPSVLEEIDRVLGRNTTHCPSYEDLCQLEYLECVIKETLRLFPAAPLIGRHIDEDFILD 61
V EE RVL PSY+ + QL+Y+ V+ E LRL+P AP + ED +L
Sbjct: 286 VLQKAAEEAARVL---VDPVPSYKQVKQLKYVGMVLNEALRLWPTAPAFSLYAKEDTVLG 342
Query: 62 G-LTIPAGVTVLISIYALHRDPKYYPS------PGRF-DPSRWMRFRFR--GDKTSAPLL 111
G + G +++ I LHRD + P RF +PS + F+ G+ A
Sbjct: 343 GEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERFENPSAIPQHAFKPFGNGQRA--- 399
Query: 112 ELPLIPTSFVLEEIDRVLGRNTTHCPSYEDLCQLEYLECVIKETLRLFPAAPLIGRHIDE 171
I F L E VLG H +ED E IKETL L P + + +
Sbjct: 400 ---CIGQQFALHEATLVLGMMLKHF-DFEDHTN---YELDIKETLTLKPEG-FVVKAKSK 451
Query: 172 DFILDGLTIPAVE 184
L G+ P+ E
Sbjct: 452 KIPLGGIPSPSTE 464
>pdb|1JPZ|A Chain A, Crystal Structure Of A Complex Of The Heme Domain Of
P450bm- 3 With N-Palmitoylglycine
pdb|1JPZ|B Chain B, Crystal Structure Of A Complex Of The Heme Domain Of
P450bm- 3 With N-Palmitoylglycine
pdb|1ZO9|A Chain A, Crystal Structure Of The Wild Type Heme Domain Of P450bm-3
With N- Palmitoylmethionine
pdb|1ZO9|B Chain B, Crystal Structure Of The Wild Type Heme Domain Of P450bm-3
With N- Palmitoylmethionine
Length = 473
Score = 56.2 bits (134), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 60/193 (31%), Positives = 83/193 (43%), Gaps = 24/193 (12%)
Query: 2 VYPSVLEEIDRVLGRNTTHCPSYEDLCQLEYLECVIKETLRLFPAAPLIGRHIDEDFILD 61
V EE RVL PSY+ + QL+Y+ V+ E LRL+P AP + ED +L
Sbjct: 289 VLQKAAEEAARVL---VDPVPSYKQVKQLKYVGMVLNEALRLWPTAPAFSLYAKEDTVLG 345
Query: 62 G-LTIPAGVTVLISIYALHRDPKYYPS------PGRF-DPSRWMRFRFR--GDKTSAPLL 111
G + G +++ I LHRD + P RF +PS + F+ G+ A
Sbjct: 346 GEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERFENPSAIPQHAFKPFGNGQRA--- 402
Query: 112 ELPLIPTSFVLEEIDRVLGRNTTHCPSYEDLCQLEYLECVIKETLRLFPAAPLIGRHIDE 171
I F L E VLG H +ED E IKETL L P + + +
Sbjct: 403 ---CIGQQFALHEATLVLGMMLKHF-DFEDHTN---YELDIKETLTLKPEG-FVVKAKSK 454
Query: 172 DFILDGLTIPAVE 184
L G+ P+ E
Sbjct: 455 KIPLGGIPSPSTE 467
>pdb|1SMI|A Chain A, A Single Mutation Of P450 Bm3 Induces The Conformational
Rearrangement Seen Upon Substrate-Binding In Wild-Type
Enzyme
pdb|1SMI|B Chain B, A Single Mutation Of P450 Bm3 Induces The Conformational
Rearrangement Seen Upon Substrate-Binding In Wild-Type
Enzyme
pdb|1SMJ|A Chain A, Structure Of The A264e Mutant Of Cytochrome P450 Bm3
Complexed With Palmitoleate
pdb|1SMJ|B Chain B, Structure Of The A264e Mutant Of Cytochrome P450 Bm3
Complexed With Palmitoleate
pdb|1SMJ|C Chain C, Structure Of The A264e Mutant Of Cytochrome P450 Bm3
Complexed With Palmitoleate
pdb|1SMJ|D Chain D, Structure Of The A264e Mutant Of Cytochrome P450 Bm3
Complexed With Palmitoleate
Length = 471
Score = 56.2 bits (134), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 60/193 (31%), Positives = 83/193 (43%), Gaps = 24/193 (12%)
Query: 2 VYPSVLEEIDRVLGRNTTHCPSYEDLCQLEYLECVIKETLRLFPAAPLIGRHIDEDFILD 61
V EE RVL PSY+ + QL+Y+ V+ E LRL+P AP + ED +L
Sbjct: 286 VLQKAAEEAARVL---VDPVPSYKQVKQLKYVGMVLNEALRLWPTAPAFSLYAKEDTVLG 342
Query: 62 G-LTIPAGVTVLISIYALHRDPKYYPS------PGRF-DPSRWMRFRFR--GDKTSAPLL 111
G + G +++ I LHRD + P RF +PS + F+ G+ A
Sbjct: 343 GEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERFENPSAIPQHAFKPFGNGQRA--- 399
Query: 112 ELPLIPTSFVLEEIDRVLGRNTTHCPSYEDLCQLEYLECVIKETLRLFPAAPLIGRHIDE 171
I F L E VLG H +ED E IKETL L P + + +
Sbjct: 400 ---CIGQQFALHEATLVLGMMLKHF-DFEDHTN---YELDIKETLTLKPEG-FVVKAKSK 451
Query: 172 DFILDGLTIPAVE 184
L G+ P+ E
Sbjct: 452 KIPLGGIPSPSTE 464
>pdb|3KX5|A Chain A, Crystal Structure Of Bacillus Megaterium Bm3 Heme Domain
Mut
pdb|3KX5|B Chain B, Crystal Structure Of Bacillus Megaterium Bm3 Heme Domain
Mut
Length = 470
Score = 56.2 bits (134), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 60/193 (31%), Positives = 83/193 (43%), Gaps = 24/193 (12%)
Query: 2 VYPSVLEEIDRVLGRNTTHCPSYEDLCQLEYLECVIKETLRLFPAAPLIGRHIDEDFILD 61
V EE RVL PSY+ + QL+Y+ V+ E LRL+P AP + ED +L
Sbjct: 286 VLQKAAEEAARVL---VDPVPSYKQVKQLKYVGMVLNEALRLWPTAPAFSLYAKEDTVLG 342
Query: 62 G-LTIPAGVTVLISIYALHRDPKYYPS------PGRF-DPSRWMRFRFR--GDKTSAPLL 111
G + G +++ I LHRD + P RF +PS + F+ G+ A
Sbjct: 343 GEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERFENPSAIPQHAFKPFGNGQRA--- 399
Query: 112 ELPLIPTSFVLEEIDRVLGRNTTHCPSYEDLCQLEYLECVIKETLRLFPAAPLIGRHIDE 171
I F L E VLG H +ED E IKETL L P + + +
Sbjct: 400 ---CIGQQFALHEATLVLGMMLKHF-DFEDHTN---YELDIKETLTLKPEG-FVVKAKSK 451
Query: 172 DFILDGLTIPAVE 184
L G+ P+ E
Sbjct: 452 KIPLGGIPSPSTE 464
>pdb|1FAH|A Chain A, Structure Of Cytochrome P450
pdb|1FAH|B Chain B, Structure Of Cytochrome P450
Length = 471
Score = 56.2 bits (134), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 60/193 (31%), Positives = 83/193 (43%), Gaps = 24/193 (12%)
Query: 2 VYPSVLEEIDRVLGRNTTHCPSYEDLCQLEYLECVIKETLRLFPAAPLIGRHIDEDFILD 61
V EE RVL PSY+ + QL+Y+ V+ E LRL+P AP + ED +L
Sbjct: 286 VLQKAAEEAARVL---VDPVPSYKQVKQLKYVGMVLNEALRLWPTAPAFSLYAKEDTVLG 342
Query: 62 G-LTIPAGVTVLISIYALHRDPKYYPS------PGRF-DPSRWMRFRFR--GDKTSAPLL 111
G + G +++ I LHRD + P RF +PS + F+ G+ A
Sbjct: 343 GEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERFENPSAIPQHAFKPFGNGQRA--- 399
Query: 112 ELPLIPTSFVLEEIDRVLGRNTTHCPSYEDLCQLEYLECVIKETLRLFPAAPLIGRHIDE 171
I F L E VLG H +ED E IKETL L P + + +
Sbjct: 400 ---CIGQQFALHEATLVLGMMLKHF-DFEDHTN---YELDIKETLTLKPEG-FVVKAKSK 451
Query: 172 DFILDGLTIPAVE 184
L G+ P+ E
Sbjct: 452 KIPLGGIPSPSTE 464
>pdb|2IJ3|A Chain A, Structure Of The A264h Mutant Of Cytochrome P450 Bm3
pdb|2IJ3|B Chain B, Structure Of The A264h Mutant Of Cytochrome P450 Bm3
Length = 470
Score = 56.2 bits (134), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 60/193 (31%), Positives = 83/193 (43%), Gaps = 24/193 (12%)
Query: 2 VYPSVLEEIDRVLGRNTTHCPSYEDLCQLEYLECVIKETLRLFPAAPLIGRHIDEDFILD 61
V EE RVL PSY+ + QL+Y+ V+ E LRL+P AP + ED +L
Sbjct: 286 VLQKAAEEAARVL---VDPVPSYKQVKQLKYVGMVLNEALRLWPTAPAFSLYAKEDTVLG 342
Query: 62 G-LTIPAGVTVLISIYALHRDPKYYPS------PGRF-DPSRWMRFRFR--GDKTSAPLL 111
G + G +++ I LHRD + P RF +PS + F+ G+ A
Sbjct: 343 GEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERFENPSAIPQHAFKPFGNGQRA--- 399
Query: 112 ELPLIPTSFVLEEIDRVLGRNTTHCPSYEDLCQLEYLECVIKETLRLFPAAPLIGRHIDE 171
I F L E VLG H +ED E IKETL L P + + +
Sbjct: 400 ---CIGQQFALHEATLVLGMMLKHF-DFEDHTN---YELDIKETLTLKPEG-FVVKAKSK 451
Query: 172 DFILDGLTIPAVE 184
L G+ P+ E
Sbjct: 452 KIPLGGIPSPSTE 464
>pdb|3KX3|A Chain A, Crystal Structure Of Bacillus Megaterium Bm3 Heme Domain
Mut
pdb|3KX3|B Chain B, Crystal Structure Of Bacillus Megaterium Bm3 Heme Domain
Mut
Length = 470
Score = 56.2 bits (134), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 60/193 (31%), Positives = 83/193 (43%), Gaps = 24/193 (12%)
Query: 2 VYPSVLEEIDRVLGRNTTHCPSYEDLCQLEYLECVIKETLRLFPAAPLIGRHIDEDFILD 61
V EE RVL PSY+ + QL+Y+ V+ E LRL+P AP + ED +L
Sbjct: 286 VLQKAAEEAARVL---VDPVPSYKQVKQLKYVGMVLNEALRLWPTAPAFSLYAKEDTVLG 342
Query: 62 G-LTIPAGVTVLISIYALHRDPKYYPS------PGRF-DPSRWMRFRFR--GDKTSAPLL 111
G + G +++ I LHRD + P RF +PS + F+ G+ A
Sbjct: 343 GEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERFENPSAIPQHAFKPFGNGQRA--- 399
Query: 112 ELPLIPTSFVLEEIDRVLGRNTTHCPSYEDLCQLEYLECVIKETLRLFPAAPLIGRHIDE 171
I F L E VLG H +ED E IKETL L P + + +
Sbjct: 400 ---CIGQQFALHEATLVLGMMLKHF-DFEDHTN---YELDIKETLTLKPEG-FVVKAKSK 451
Query: 172 DFILDGLTIPAVE 184
L G+ P+ E
Sbjct: 452 KIPLGGIPSPSTE 464
>pdb|3EKB|A Chain A, Crystal Structure Of The A264c Mutant Heme Domain Of
Cytochrome P450 Bm3
pdb|3EKB|B Chain B, Crystal Structure Of The A264c Mutant Heme Domain Of
Cytochrome P450 Bm3
Length = 470
Score = 56.2 bits (134), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 60/193 (31%), Positives = 83/193 (43%), Gaps = 24/193 (12%)
Query: 2 VYPSVLEEIDRVLGRNTTHCPSYEDLCQLEYLECVIKETLRLFPAAPLIGRHIDEDFILD 61
V EE RVL PSY+ + QL+Y+ V+ E LRL+P AP + ED +L
Sbjct: 286 VLQKAAEEAARVL---VDPVPSYKQVKQLKYVGMVLNEALRLWPTAPAFSLYAKEDTVLG 342
Query: 62 G-LTIPAGVTVLISIYALHRDPKYYPS------PGRF-DPSRWMRFRFR--GDKTSAPLL 111
G + G +++ I LHRD + P RF +PS + F+ G+ A
Sbjct: 343 GEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERFENPSAIPQHAFKPFGNGQRA--- 399
Query: 112 ELPLIPTSFVLEEIDRVLGRNTTHCPSYEDLCQLEYLECVIKETLRLFPAAPLIGRHIDE 171
I F L E VLG H +ED E IKETL L P + + +
Sbjct: 400 ---CIGQQFALHEATLVLGMMLKHF-DFEDHTN---YELDIKETLTLKPEG-FVVKAKSK 451
Query: 172 DFILDGLTIPAVE 184
L G+ P+ E
Sbjct: 452 KIPLGGIPSPSTE 464
>pdb|3RUK|A Chain A, Human Cytochrome P450 Cyp17a1 In Complex With Abiraterone
pdb|3RUK|B Chain B, Human Cytochrome P450 Cyp17a1 In Complex With Abiraterone
pdb|3RUK|C Chain C, Human Cytochrome P450 Cyp17a1 In Complex With Abiraterone
pdb|3RUK|D Chain D, Human Cytochrome P450 Cyp17a1 In Complex With Abiraterone
pdb|3SWZ|A Chain A, Human Cytochrome P450 17a1 In Complex With Tok-001
pdb|3SWZ|B Chain B, Human Cytochrome P450 17a1 In Complex With Tok-001
pdb|3SWZ|C Chain C, Human Cytochrome P450 17a1 In Complex With Tok-001
pdb|3SWZ|D Chain D, Human Cytochrome P450 17a1 In Complex With Tok-001
Length = 494
Score = 56.2 bits (134), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 33/98 (33%), Positives = 54/98 (55%), Gaps = 3/98 (3%)
Query: 2 VYPSVLEEIDRVLGRNTTHCPSYEDLCQLEYLECVIKETLRLFPAAPLIGRH-IDEDFIL 60
V + EEID+ +G + T P+ D +L LE I+E LRL P AP++ H + D +
Sbjct: 306 VKKKLYEEIDQNVGFSRT--PTISDRNRLLLLEATIREVLRLRPVAPMLIPHKANVDSSI 363
Query: 61 DGLTIPAGVTVLISIYALHRDPKYYPSPGRFDPSRWMR 98
+ G V+I+++ALH + K + P +F P R++
Sbjct: 364 GEFAVDKGTEVIINLWALHHNEKEWHQPDQFMPERFLN 401
Score = 34.7 bits (78), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 24/60 (40%), Positives = 34/60 (56%), Gaps = 3/60 (5%)
Query: 106 TSAPLLELPLIPTSFVLEEIDRVLGRNTTHCPSYEDLCQLEYLECVIKETLRLFPAAPLI 165
T A LL P + + EEID+ +G + T P+ D +L LE I+E LRL P AP++
Sbjct: 296 TLAFLLHNPQVKKK-LYEEIDQNVGFSRT--PTISDRNRLLLLEATIREVLRLRPVAPML 352
>pdb|3M4V|A Chain A, Crystal Structure Of The A330p Mutant Of Cytochrome P450
Bm3
pdb|3M4V|B Chain B, Crystal Structure Of The A330p Mutant Of Cytochrome P450
Bm3
Length = 482
Score = 55.5 bits (132), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 60/193 (31%), Positives = 83/193 (43%), Gaps = 24/193 (12%)
Query: 2 VYPSVLEEIDRVLGRNTTHCPSYEDLCQLEYLECVIKETLRLFPAAPLIGRHIDEDFILD 61
V EE RVL PSY+ + QL+Y+ V+ E LRL+P AP + ED +L
Sbjct: 287 VLQKAAEEAARVL---VDPVPSYKQVKQLKYVGMVLNEALRLWPTAPPFSLYAKEDTVLG 343
Query: 62 G-LTIPAGVTVLISIYALHRDPKYYPS------PGRF-DPSRWMRFRFR--GDKTSAPLL 111
G + G +++ I LHRD + P RF +PS + F+ G+ A
Sbjct: 344 GEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERFENPSAIPQHAFKPFGNGQRA--- 400
Query: 112 ELPLIPTSFVLEEIDRVLGRNTTHCPSYEDLCQLEYLECVIKETLRLFPAAPLIGRHIDE 171
I F L E VLG H +ED E IKETL L P + + +
Sbjct: 401 ---CIGQQFALHEATLVLGMMLKHF-DFEDHTN---YELDIKETLTLKPEG-FVVKAKSK 452
Query: 172 DFILDGLTIPAVE 184
L G+ P+ E
Sbjct: 453 KIPLGGIPSPSTE 465
>pdb|3NPL|A Chain A, Structure Of Ru(Bpy)2(A-Phen)(K97c) P450 Bm3 Heme Domain,
A Ruthenium Modified P450 Bm3 Mutant
pdb|3NPL|B Chain B, Structure Of Ru(Bpy)2(A-Phen)(K97c) P450 Bm3 Heme Domain,
A Ruthenium Modified P450 Bm3 Mutant
Length = 470
Score = 55.5 bits (132), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 56/169 (33%), Positives = 74/169 (43%), Gaps = 23/169 (13%)
Query: 2 VYPSVLEEIDRVLGRNTTHCPSYEDLCQLEYLECVIKETLRLFPAAPLIGRHIDEDFILD 61
V EE RVL PSY+ + QL+Y+ V+ E LRL+P AP + ED +L
Sbjct: 287 VLQKAAEEAARVL---VDPVPSYKQVKQLKYVGMVLNEALRLWPTAPAFSLYAKEDTVLG 343
Query: 62 G-LTIPAGVTVLISIYALHRDPKYYPS------PGRF-DPSRWMRFRFR--GDKTSAPLL 111
G + G +++ I LHRD + P RF +PS + F+ G+ A
Sbjct: 344 GEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERFENPSAIPQHAFKPFGNGQRA--- 400
Query: 112 ELPLIPTSFVLEEIDRVLGRNTTHCPSYEDLCQLEYLECVIKETLRLFP 160
I F L E VLG H +ED E IKETL L P
Sbjct: 401 ---CIGQQFALHEATLVLGMMLKHF-DFEDHTN---YELDIKETLTLKP 442
Score = 43.1 bits (100), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 31/86 (36%), Positives = 43/86 (50%), Gaps = 10/86 (11%)
Query: 99 FRFRGDKTSAPLLELPL---IPTSFVL----EEIDRVLGRNTTHCPSYEDLCQLEYLECV 151
F G +T++ LL L + VL EE RVL PSY+ + QL+Y+ V
Sbjct: 262 FLIAGHETTSGLLSFALYFLVKNPHVLQKAAEEAARVL---VDPVPSYKQVKQLKYVGMV 318
Query: 152 IKETLRLFPAAPLIGRHIDEDFILDG 177
+ E LRL+P AP + ED +L G
Sbjct: 319 LNEALRLWPTAPAFSLYAKEDTVLGG 344
>pdb|1BVY|A Chain A, Complex Of The Heme And Fmn-Binding Domains Of The
Cytochrome P450(Bm-3)
pdb|1BVY|B Chain B, Complex Of The Heme And Fmn-Binding Domains Of The
Cytochrome P450(Bm-3)
Length = 458
Score = 55.5 bits (132), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 56/169 (33%), Positives = 74/169 (43%), Gaps = 23/169 (13%)
Query: 2 VYPSVLEEIDRVLGRNTTHCPSYEDLCQLEYLECVIKETLRLFPAAPLIGRHIDEDFILD 61
V EE RVL PSY+ + QL+Y+ V+ E LRL+P AP + ED +L
Sbjct: 286 VLQKAAEEAARVL---VDPVPSYKQVKQLKYVGMVLNEALRLWPTAPAFSLYAKEDTVLG 342
Query: 62 G-LTIPAGVTVLISIYALHRDPKYYPS------PGRF-DPSRWMRFRFR--GDKTSAPLL 111
G + G +++ I LHRD + P RF +PS + F+ G+ A
Sbjct: 343 GEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERFENPSAIPQHAFKPFGNGQRA--- 399
Query: 112 ELPLIPTSFVLEEIDRVLGRNTTHCPSYEDLCQLEYLECVIKETLRLFP 160
I F L E VLG H +ED E IKETL L P
Sbjct: 400 ---CIGQQFALHEATLVLGMMLKHF-DFEDHTN---YELDIKETLTLKP 441
Score = 43.1 bits (100), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 31/86 (36%), Positives = 43/86 (50%), Gaps = 10/86 (11%)
Query: 99 FRFRGDKTSAPLLELPL---IPTSFVL----EEIDRVLGRNTTHCPSYEDLCQLEYLECV 151
F G +T++ LL L + VL EE RVL PSY+ + QL+Y+ V
Sbjct: 261 FLIAGHETTSGLLSFALYFLVKNPHVLQKAAEEAARVL---VDPVPSYKQVKQLKYVGMV 317
Query: 152 IKETLRLFPAAPLIGRHIDEDFILDG 177
+ E LRL+P AP + ED +L G
Sbjct: 318 LNEALRLWPTAPAFSLYAKEDTVLGG 343
>pdb|2UWH|A Chain A, Cytochrome P450 Bm3 Mutant In Complex With Palmitic Acid
pdb|2UWH|B Chain B, Cytochrome P450 Bm3 Mutant In Complex With Palmitic Acid
pdb|2UWH|C Chain C, Cytochrome P450 Bm3 Mutant In Complex With Palmitic Acid
pdb|2UWH|D Chain D, Cytochrome P450 Bm3 Mutant In Complex With Palmitic Acid
pdb|2UWH|E Chain E, Cytochrome P450 Bm3 Mutant In Complex With Palmitic Acid
pdb|2UWH|F Chain F, Cytochrome P450 Bm3 Mutant In Complex With Palmitic Acid
Length = 458
Score = 55.5 bits (132), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 56/169 (33%), Positives = 74/169 (43%), Gaps = 23/169 (13%)
Query: 2 VYPSVLEEIDRVLGRNTTHCPSYEDLCQLEYLECVIKETLRLFPAAPLIGRHIDEDFILD 61
V EE RVL PSY+ + QL+Y+ V+ E LRL+P AP + ED +L
Sbjct: 286 VLQKAAEEAARVL---VDPVPSYKQVKQLKYVGMVLNEALRLWPTAPAFSLYAKEDTVLG 342
Query: 62 G-LTIPAGVTVLISIYALHRDPKYYPS------PGRF-DPSRWMRFRFR--GDKTSAPLL 111
G + G +++ I LHRD + P RF +PS + F+ G+ A
Sbjct: 343 GEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERFENPSAIPQHAFKPFGNGQRA--- 399
Query: 112 ELPLIPTSFVLEEIDRVLGRNTTHCPSYEDLCQLEYLECVIKETLRLFP 160
I F L E VLG H +ED E IKETL L P
Sbjct: 400 ---CIGQQFALHEATLVLGMMLKHF-DFEDHTN---YELDIKETLTLKP 441
Score = 43.1 bits (100), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 31/86 (36%), Positives = 43/86 (50%), Gaps = 10/86 (11%)
Query: 99 FRFRGDKTSAPLLELPL---IPTSFVL----EEIDRVLGRNTTHCPSYEDLCQLEYLECV 151
F G +T++ LL L + VL EE RVL PSY+ + QL+Y+ V
Sbjct: 261 FLIAGHETTSGLLSFALYFLVKNPHVLQKAAEEAARVL---VDPVPSYKQVKQLKYVGMV 317
Query: 152 IKETLRLFPAAPLIGRHIDEDFILDG 177
+ E LRL+P AP + ED +L G
Sbjct: 318 LNEALRLWPTAPAFSLYAKEDTVLGG 343
>pdb|1YQO|A Chain A, T268a Mutant Heme Domain Of Flavocytochrome P450 Bm3
pdb|1YQO|B Chain B, T268a Mutant Heme Domain Of Flavocytochrome P450 Bm3
Length = 455
Score = 55.1 bits (131), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 56/169 (33%), Positives = 74/169 (43%), Gaps = 23/169 (13%)
Query: 2 VYPSVLEEIDRVLGRNTTHCPSYEDLCQLEYLECVIKETLRLFPAAPLIGRHIDEDFILD 61
V EE RVL PSY+ + QL+Y+ V+ E LRL+P AP + ED +L
Sbjct: 286 VLQKAAEEAARVL---VDPVPSYKQVKQLKYVGMVLNEALRLWPTAPAFSLYAKEDTVLG 342
Query: 62 G-LTIPAGVTVLISIYALHRDPKYYPS------PGRF-DPSRWMRFRFR--GDKTSAPLL 111
G + G +++ I LHRD + P RF +PS + F+ G+ A
Sbjct: 343 GEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERFENPSAIPQHAFKPFGNGQRA--- 399
Query: 112 ELPLIPTSFVLEEIDRVLGRNTTHCPSYEDLCQLEYLECVIKETLRLFP 160
I F L E VLG H +ED E IKETL L P
Sbjct: 400 ---CIGQQFALHEATLVLGMMLKHF-DFEDHTN---YELDIKETLTLKP 441
Score = 41.6 bits (96), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 23/55 (41%), Positives = 31/55 (56%), Gaps = 3/55 (5%)
Query: 123 EEIDRVLGRNTTHCPSYEDLCQLEYLECVIKETLRLFPAAPLIGRHIDEDFILDG 177
EE RVL PSY+ + QL+Y+ V+ E LRL+P AP + ED +L G
Sbjct: 292 EEAARVL---VDPVPSYKQVKQLKYVGMVLNEALRLWPTAPAFSLYAKEDTVLGG 343
>pdb|1P0X|A Chain A, F393y Mutant Heme Domain Of Flavocytochrome P450 Bm3
pdb|1P0X|B Chain B, F393y Mutant Heme Domain Of Flavocytochrome P450 Bm3
Length = 455
Score = 55.1 bits (131), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 56/169 (33%), Positives = 74/169 (43%), Gaps = 23/169 (13%)
Query: 2 VYPSVLEEIDRVLGRNTTHCPSYEDLCQLEYLECVIKETLRLFPAAPLIGRHIDEDFILD 61
V EE RVL PSY+ + QL+Y+ V+ E LRL+P AP + ED +L
Sbjct: 286 VLQKAAEEAARVL---VDPVPSYKQVKQLKYVGMVLNEALRLWPTAPAFSLYAKEDTVLG 342
Query: 62 G-LTIPAGVTVLISIYALHRDPKYYPS------PGRF-DPSRWMRFRFR--GDKTSAPLL 111
G + G +++ I LHRD + P RF +PS + F+ G+ A
Sbjct: 343 GEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERFENPSAIPQHAFKPYGNGQRA--- 399
Query: 112 ELPLIPTSFVLEEIDRVLGRNTTHCPSYEDLCQLEYLECVIKETLRLFP 160
I F L E VLG H +ED E IKETL L P
Sbjct: 400 ---CIGQQFALHEATLVLGMMLKHF-DFEDHTN---YELDIKETLTLKP 441
Score = 43.1 bits (100), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 31/86 (36%), Positives = 43/86 (50%), Gaps = 10/86 (11%)
Query: 99 FRFRGDKTSAPLLELPL---IPTSFVL----EEIDRVLGRNTTHCPSYEDLCQLEYLECV 151
F G +T++ LL L + VL EE RVL PSY+ + QL+Y+ V
Sbjct: 261 FLIAGHETTSGLLSFALYFLVKNPHVLQKAAEEAARVL---VDPVPSYKQVKQLKYVGMV 317
Query: 152 IKETLRLFPAAPLIGRHIDEDFILDG 177
+ E LRL+P AP + ED +L G
Sbjct: 318 LNEALRLWPTAPAFSLYAKEDTVLGG 343
>pdb|1P0V|A Chain A, F393a Mutant Heme Domain Of Flavocytochrome P450 Bm3
pdb|1P0V|B Chain B, F393a Mutant Heme Domain Of Flavocytochrome P450 Bm3
Length = 455
Score = 55.1 bits (131), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 56/169 (33%), Positives = 74/169 (43%), Gaps = 23/169 (13%)
Query: 2 VYPSVLEEIDRVLGRNTTHCPSYEDLCQLEYLECVIKETLRLFPAAPLIGRHIDEDFILD 61
V EE RVL PSY+ + QL+Y+ V+ E LRL+P AP + ED +L
Sbjct: 286 VLQKAAEEAARVL---VDPVPSYKQVKQLKYVGMVLNEALRLWPTAPAFSLYAKEDTVLG 342
Query: 62 G-LTIPAGVTVLISIYALHRDPKYYPS------PGRF-DPSRWMRFRFR--GDKTSAPLL 111
G + G +++ I LHRD + P RF +PS + F+ G+ A
Sbjct: 343 GEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERFENPSAIPQHAFKPAGNGQRA--- 399
Query: 112 ELPLIPTSFVLEEIDRVLGRNTTHCPSYEDLCQLEYLECVIKETLRLFP 160
I F L E VLG H +ED E IKETL L P
Sbjct: 400 ---CIGQQFALHEATLVLGMMLKHF-DFEDHTN---YELDIKETLTLKP 441
Score = 43.1 bits (100), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 31/86 (36%), Positives = 43/86 (50%), Gaps = 10/86 (11%)
Query: 99 FRFRGDKTSAPLLELPL---IPTSFVL----EEIDRVLGRNTTHCPSYEDLCQLEYLECV 151
F G +T++ LL L + VL EE RVL PSY+ + QL+Y+ V
Sbjct: 261 FLIAGHETTSGLLSFALYFLVKNPHVLQKAAEEAARVL---VDPVPSYKQVKQLKYVGMV 317
Query: 152 IKETLRLFPAAPLIGRHIDEDFILDG 177
+ E LRL+P AP + ED +L G
Sbjct: 318 LNEALRLWPTAPAFSLYAKEDTVLGG 343
>pdb|2BMH|A Chain A, Modeling Protein-Substrate Interactions In The Heme Domain
Of Cytochrome P450bm-3
pdb|2BMH|B Chain B, Modeling Protein-Substrate Interactions In The Heme Domain
Of Cytochrome P450bm-3
pdb|1BU7|A Chain A, Cryogenic Structure Of Cytochrome P450bm-3 Heme Domain
pdb|1BU7|B Chain B, Cryogenic Structure Of Cytochrome P450bm-3 Heme Domain
pdb|2J1M|A Chain A, P450 Bm3 Heme Domain In Complex With Dmso
pdb|2J1M|B Chain B, P450 Bm3 Heme Domain In Complex With Dmso
pdb|2J4S|A Chain A, P450 Bm3 Heme Domain In Complex With Dmso
pdb|2J4S|B Chain B, P450 Bm3 Heme Domain In Complex With Dmso
Length = 455
Score = 55.1 bits (131), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 56/169 (33%), Positives = 74/169 (43%), Gaps = 23/169 (13%)
Query: 2 VYPSVLEEIDRVLGRNTTHCPSYEDLCQLEYLECVIKETLRLFPAAPLIGRHIDEDFILD 61
V EE RVL PSY+ + QL+Y+ V+ E LRL+P AP + ED +L
Sbjct: 286 VLQKAAEEAARVL---VDPVPSYKQVKQLKYVGMVLNEALRLWPTAPAFSLYAKEDTVLG 342
Query: 62 G-LTIPAGVTVLISIYALHRDPKYYPS------PGRF-DPSRWMRFRFR--GDKTSAPLL 111
G + G +++ I LHRD + P RF +PS + F+ G+ A
Sbjct: 343 GEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERFENPSAIPQHAFKPFGNGQRA--- 399
Query: 112 ELPLIPTSFVLEEIDRVLGRNTTHCPSYEDLCQLEYLECVIKETLRLFP 160
I F L E VLG H +ED E IKETL L P
Sbjct: 400 ---CIGQQFALHEATLVLGMMLKHF-DFEDHTN---YELDIKETLTLKP 441
Score = 43.1 bits (100), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 31/86 (36%), Positives = 43/86 (50%), Gaps = 10/86 (11%)
Query: 99 FRFRGDKTSAPLLELPL---IPTSFVL----EEIDRVLGRNTTHCPSYEDLCQLEYLECV 151
F G +T++ LL L + VL EE RVL PSY+ + QL+Y+ V
Sbjct: 261 FLIAGHETTSGLLSFALYFLVKNPHVLQKAAEEAARVL---VDPVPSYKQVKQLKYVGMV 317
Query: 152 IKETLRLFPAAPLIGRHIDEDFILDG 177
+ E LRL+P AP + ED +L G
Sbjct: 318 LNEALRLWPTAPAFSLYAKEDTVLGG 343
>pdb|2X7Y|A Chain A, P450 Bm3 F87a In Complex With Dmso
pdb|2X7Y|B Chain B, P450 Bm3 F87a In Complex With Dmso
pdb|2X80|A Chain A, P450 Bm3 F87a In Complex With Dmso
pdb|2X80|B Chain B, P450 Bm3 F87a In Complex With Dmso
Length = 455
Score = 55.1 bits (131), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 56/169 (33%), Positives = 74/169 (43%), Gaps = 23/169 (13%)
Query: 2 VYPSVLEEIDRVLGRNTTHCPSYEDLCQLEYLECVIKETLRLFPAAPLIGRHIDEDFILD 61
V EE RVL PSY+ + QL+Y+ V+ E LRL+P AP + ED +L
Sbjct: 286 VLQKAAEEAARVL---VDPVPSYKQVKQLKYVGMVLNEALRLWPTAPAFSLYAKEDTVLG 342
Query: 62 G-LTIPAGVTVLISIYALHRDPKYYPS------PGRF-DPSRWMRFRFR--GDKTSAPLL 111
G + G +++ I LHRD + P RF +PS + F+ G+ A
Sbjct: 343 GEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERFENPSAIPQHAFKPFGNGQRA--- 399
Query: 112 ELPLIPTSFVLEEIDRVLGRNTTHCPSYEDLCQLEYLECVIKETLRLFP 160
I F L E VLG H +ED E IKETL L P
Sbjct: 400 ---CIGQQFALHEATLVLGMMLKHF-DFEDHTN---YELDIKETLTLKP 441
Score = 43.1 bits (100), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 31/86 (36%), Positives = 43/86 (50%), Gaps = 10/86 (11%)
Query: 99 FRFRGDKTSAPLLELPL---IPTSFVL----EEIDRVLGRNTTHCPSYEDLCQLEYLECV 151
F G +T++ LL L + VL EE RVL PSY+ + QL+Y+ V
Sbjct: 261 FLIAGHETTSGLLSFALYFLVKNPHVLQKAAEEAARVL---VDPVPSYKQVKQLKYVGMV 317
Query: 152 IKETLRLFPAAPLIGRHIDEDFILDG 177
+ E LRL+P AP + ED +L G
Sbjct: 318 LNEALRLWPTAPAFSLYAKEDTVLGG 343
>pdb|1JME|A Chain A, Crystal Structure Of Phe393his Cytochrome P450 Bm3
pdb|1JME|B Chain B, Crystal Structure Of Phe393his Cytochrome P450 Bm3
Length = 455
Score = 55.1 bits (131), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 56/169 (33%), Positives = 74/169 (43%), Gaps = 23/169 (13%)
Query: 2 VYPSVLEEIDRVLGRNTTHCPSYEDLCQLEYLECVIKETLRLFPAAPLIGRHIDEDFILD 61
V EE RVL PSY+ + QL+Y+ V+ E LRL+P AP + ED +L
Sbjct: 286 VLQKAAEEAARVL---VDPVPSYKQVKQLKYVGMVLNEALRLWPTAPAFSLYAKEDTVLG 342
Query: 62 G-LTIPAGVTVLISIYALHRDPKYYPS------PGRF-DPSRWMRFRFR--GDKTSAPLL 111
G + G +++ I LHRD + P RF +PS + F+ G+ A
Sbjct: 343 GEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERFENPSAIPQHAFKPHGNGQRA--- 399
Query: 112 ELPLIPTSFVLEEIDRVLGRNTTHCPSYEDLCQLEYLECVIKETLRLFP 160
I F L E VLG H +ED E IKETL L P
Sbjct: 400 ---CIGQQFALHEATLVLGMMLKHF-DFEDHTN---YELDIKETLTLKP 441
Score = 43.1 bits (100), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 31/86 (36%), Positives = 43/86 (50%), Gaps = 10/86 (11%)
Query: 99 FRFRGDKTSAPLLELPL---IPTSFVL----EEIDRVLGRNTTHCPSYEDLCQLEYLECV 151
F G +T++ LL L + VL EE RVL PSY+ + QL+Y+ V
Sbjct: 261 FLIAGHETTSGLLSFALYFLVKNPHVLQKAAEEAARVL---VDPVPSYKQVKQLKYVGMV 317
Query: 152 IKETLRLFPAAPLIGRHIDEDFILDG 177
+ E LRL+P AP + ED +L G
Sbjct: 318 LNEALRLWPTAPAFSLYAKEDTVLGG 343
>pdb|1YQP|A Chain A, T268n Mutant Cytochrome Domain Of Flavocytochrome P450 Bm3
pdb|1YQP|B Chain B, T268n Mutant Cytochrome Domain Of Flavocytochrome P450 Bm3
Length = 455
Score = 55.1 bits (131), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 56/169 (33%), Positives = 74/169 (43%), Gaps = 23/169 (13%)
Query: 2 VYPSVLEEIDRVLGRNTTHCPSYEDLCQLEYLECVIKETLRLFPAAPLIGRHIDEDFILD 61
V EE RVL PSY+ + QL+Y+ V+ E LRL+P AP + ED +L
Sbjct: 286 VLQKAAEEAARVL---VDPVPSYKQVKQLKYVGMVLNEALRLWPTAPAFSLYAKEDTVLG 342
Query: 62 G-LTIPAGVTVLISIYALHRDPKYYPS------PGRF-DPSRWMRFRFR--GDKTSAPLL 111
G + G +++ I LHRD + P RF +PS + F+ G+ A
Sbjct: 343 GEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERFENPSAIPQHAFKPFGNGQRA--- 399
Query: 112 ELPLIPTSFVLEEIDRVLGRNTTHCPSYEDLCQLEYLECVIKETLRLFP 160
I F L E VLG H +ED E IKETL L P
Sbjct: 400 ---CIGQQFALHEATLVLGMMLKHF-DFEDHTN---YELDIKETLTLKP 441
Score = 41.6 bits (96), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 23/55 (41%), Positives = 31/55 (56%), Gaps = 3/55 (5%)
Query: 123 EEIDRVLGRNTTHCPSYEDLCQLEYLECVIKETLRLFPAAPLIGRHIDEDFILDG 177
EE RVL PSY+ + QL+Y+ V+ E LRL+P AP + ED +L G
Sbjct: 292 EEAARVL---VDPVPSYKQVKQLKYVGMVLNEALRLWPTAPAFSLYAKEDTVLGG 343
>pdb|3DGI|A Chain A, Crystal Structure Of F87aT268A MUTANT OF CYP BM3
pdb|3DGI|B Chain B, Crystal Structure Of F87aT268A MUTANT OF CYP BM3
Length = 461
Score = 55.1 bits (131), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 56/169 (33%), Positives = 74/169 (43%), Gaps = 23/169 (13%)
Query: 2 VYPSVLEEIDRVLGRNTTHCPSYEDLCQLEYLECVIKETLRLFPAAPLIGRHIDEDFILD 61
V EE RVL PSY+ + QL+Y+ V+ E LRL+P AP + ED +L
Sbjct: 286 VLQKAAEEAARVL---VDPVPSYKQVKQLKYVGMVLNEALRLWPTAPAFSLYAKEDTVLG 342
Query: 62 G-LTIPAGVTVLISIYALHRDPKYYPS------PGRF-DPSRWMRFRFR--GDKTSAPLL 111
G + G +++ I LHRD + P RF +PS + F+ G+ A
Sbjct: 343 GEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERFENPSAIPQHAFKPFGNGQRA--- 399
Query: 112 ELPLIPTSFVLEEIDRVLGRNTTHCPSYEDLCQLEYLECVIKETLRLFP 160
I F L E VLG H +ED E IKETL L P
Sbjct: 400 ---CIGQQFALHEATLVLGMMLKHF-DFEDHTN---YELDIKETLTLKP 441
Score = 41.6 bits (96), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 23/55 (41%), Positives = 31/55 (56%), Gaps = 3/55 (5%)
Query: 123 EEIDRVLGRNTTHCPSYEDLCQLEYLECVIKETLRLFPAAPLIGRHIDEDFILDG 177
EE RVL PSY+ + QL+Y+ V+ E LRL+P AP + ED +L G
Sbjct: 292 EEAARVL---VDPVPSYKQVKQLKYVGMVLNEALRLWPTAPAFSLYAKEDTVLGG 343
>pdb|1P0W|A Chain A, F393w Mutant Heme Domain Of Flavocytochrome P450 Bm3
pdb|1P0W|B Chain B, F393w Mutant Heme Domain Of Flavocytochrome P450 Bm3
Length = 455
Score = 55.1 bits (131), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 56/169 (33%), Positives = 74/169 (43%), Gaps = 23/169 (13%)
Query: 2 VYPSVLEEIDRVLGRNTTHCPSYEDLCQLEYLECVIKETLRLFPAAPLIGRHIDEDFILD 61
V EE RVL PSY+ + QL+Y+ V+ E LRL+P AP + ED +L
Sbjct: 286 VLQKAAEEAARVL---VDPVPSYKQVKQLKYVGMVLNEALRLWPTAPAFSLYAKEDTVLG 342
Query: 62 G-LTIPAGVTVLISIYALHRDPKYYPS------PGRF-DPSRWMRFRFR--GDKTSAPLL 111
G + G +++ I LHRD + P RF +PS + F+ G+ A
Sbjct: 343 GEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERFENPSAIPQHAFKPWGNGQRA--- 399
Query: 112 ELPLIPTSFVLEEIDRVLGRNTTHCPSYEDLCQLEYLECVIKETLRLFP 160
I F L E VLG H +ED E IKETL L P
Sbjct: 400 ---CIGQQFALHEATLVLGMMLKHF-DFEDHTN---YELDIKETLTLKP 441
Score = 43.1 bits (100), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 31/86 (36%), Positives = 43/86 (50%), Gaps = 10/86 (11%)
Query: 99 FRFRGDKTSAPLLELPL---IPTSFVL----EEIDRVLGRNTTHCPSYEDLCQLEYLECV 151
F G +T++ LL L + VL EE RVL PSY+ + QL+Y+ V
Sbjct: 261 FLIAGHETTSGLLSFALYFLVKNPHVLQKAAEEAARVL---VDPVPSYKQVKQLKYVGMV 317
Query: 152 IKETLRLFPAAPLIGRHIDEDFILDG 177
+ E LRL+P AP + ED +L G
Sbjct: 318 LNEALRLWPTAPAFSLYAKEDTVLGG 343
>pdb|1ZO4|A Chain A, Crystal Structure Of A328s Mutant Of The Heme Domain Of
P450bm-3
pdb|1ZO4|B Chain B, Crystal Structure Of A328s Mutant Of The Heme Domain Of
P450bm-3
Length = 473
Score = 55.1 bits (131), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 59/193 (30%), Positives = 83/193 (43%), Gaps = 24/193 (12%)
Query: 2 VYPSVLEEIDRVLGRNTTHCPSYEDLCQLEYLECVIKETLRLFPAAPLIGRHIDEDFILD 61
V EE RVL PSY+ + QL+Y+ V+ E LRL+P +P + ED +L
Sbjct: 289 VLQKAAEEAARVL---VDPVPSYKQVKQLKYVGMVLNEALRLWPTSPAFSLYAKEDTVLG 345
Query: 62 G-LTIPAGVTVLISIYALHRDPKYYPS------PGRF-DPSRWMRFRFR--GDKTSAPLL 111
G + G +++ I LHRD + P RF +PS + F+ G+ A
Sbjct: 346 GEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERFENPSAIPQHAFKPFGNGQRA--- 402
Query: 112 ELPLIPTSFVLEEIDRVLGRNTTHCPSYEDLCQLEYLECVIKETLRLFPAAPLIGRHIDE 171
I F L E VLG H +ED E IKETL L P + + +
Sbjct: 403 ---CIGQQFALHEATLVLGMMLKHF-DFEDHTN---YELDIKETLTLKPEG-FVVKAKSK 454
Query: 172 DFILDGLTIPAVE 184
L G+ P+ E
Sbjct: 455 KIPLGGIPSPSTE 467
>pdb|1OG2|A Chain A, Structure Of Human Cytochrome P450 Cyp2c9
pdb|1OG2|B Chain B, Structure Of Human Cytochrome P450 Cyp2c9
pdb|1OG5|A Chain A, Structure Of Human Cytochrome P450 Cyp2c9
pdb|1OG5|B Chain B, Structure Of Human Cytochrome P450 Cyp2c9
Length = 475
Score = 55.1 bits (131), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 33/97 (34%), Positives = 49/97 (50%), Gaps = 3/97 (3%)
Query: 2 VYPSVLEEIDRVLGRNTTHCPSYEDLCQLEYLECVIKETLRLFPAAPLIGRH-IDEDFIL 60
V V EEI+RV+GRN + C +D + Y + V+ E R P H + D
Sbjct: 300 VTAKVQEEIERVIGRNRSPC--MQDRSHMPYTDAVVHEVQRYIDLLPTSLPHAVTCDIKF 357
Query: 61 DGLTIPAGVTVLISIYALHRDPKYYPSPGRFDPSRWM 97
IP G T+LIS+ ++ D K +P+P FDP ++
Sbjct: 358 RNYLIPKGTTILISLTSVLHDNKEFPNPEMFDPHHFL 394
Score = 32.0 bits (71), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 16/40 (40%), Positives = 24/40 (60%), Gaps = 2/40 (5%)
Query: 118 TSFVLEEIDRVLGRNTTHCPSYEDLCQLEYLECVIKETLR 157
T+ V EEI+RV+GRN + C +D + Y + V+ E R
Sbjct: 301 TAKVQEEIERVIGRNRSPC--MQDRSHMPYTDAVVHEVQR 338
>pdb|1R9O|A Chain A, Crystal Structure Of P4502c9 With Flurbiprofen Bound
Length = 477
Score = 55.1 bits (131), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 33/97 (34%), Positives = 49/97 (50%), Gaps = 3/97 (3%)
Query: 2 VYPSVLEEIDRVLGRNTTHCPSYEDLCQLEYLECVIKETLRLFPAAPLIGRH-IDEDFIL 60
V V EEI+RV+GRN + C +D + Y + V+ E R P H + D
Sbjct: 302 VTAKVQEEIERVIGRNRSPC--MQDRSHMPYTDAVVHEVQRYIDLLPTSLPHAVTCDIKF 359
Query: 61 DGLTIPAGVTVLISIYALHRDPKYYPSPGRFDPSRWM 97
IP G T+LIS+ ++ D K +P+P FDP ++
Sbjct: 360 RNYLIPKGTTILISLTSVLHDNKEFPNPEMFDPHHFL 396
Score = 32.0 bits (71), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 16/40 (40%), Positives = 24/40 (60%), Gaps = 2/40 (5%)
Query: 118 TSFVLEEIDRVLGRNTTHCPSYEDLCQLEYLECVIKETLR 157
T+ V EEI+RV+GRN + C +D + Y + V+ E R
Sbjct: 303 TAKVQEEIERVIGRNRSPC--MQDRSHMPYTDAVVHEVQR 340
>pdb|4DUF|A Chain A, Cytochrome P450 Bm3h-2g9 Mri Sensor Bound To Serotonin
pdb|4DUF|B Chain B, Cytochrome P450 Bm3h-2g9 Mri Sensor Bound To Serotonin
pdb|4DUF|C Chain C, Cytochrome P450 Bm3h-2g9 Mri Sensor Bound To Serotonin
pdb|4DUF|D Chain D, Cytochrome P450 Bm3h-2g9 Mri Sensor Bound To Serotonin
Length = 471
Score = 54.7 bits (130), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 56/169 (33%), Positives = 74/169 (43%), Gaps = 23/169 (13%)
Query: 2 VYPSVLEEIDRVLGRNTTHCPSYEDLCQLEYLECVIKETLRLFPAAPLIGRHIDEDFILD 61
V EE RVL PSY+ + QL+Y+ V+ E LRL+P AP + ED +L
Sbjct: 286 VLQKAAEEAARVL---VDPVPSYKQVKQLKYVGMVLNEALRLWPTAPAFSLYAKEDTVLG 342
Query: 62 G-LTIPAGVTVLISIYALHRDPKYYPS------PGRF-DPSRWMRFRFR--GDKTSAPLL 111
G + G +++ I LHRD + P RF +PS + F+ G+ A
Sbjct: 343 GEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERFENPSAIPQHAFKPFGNGQRA--- 399
Query: 112 ELPLIPTSFVLEEIDRVLGRNTTHCPSYEDLCQLEYLECVIKETLRLFP 160
I F L E VLG H +ED E IKETL L P
Sbjct: 400 ---CIGQQFALHEATLVLGMMLKHF-DFEDHTN---YELDIKETLLLKP 441
Score = 42.0 bits (97), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 30/86 (34%), Positives = 43/86 (50%), Gaps = 10/86 (11%)
Query: 99 FRFRGDKTSAPLLELPL---IPTSFVL----EEIDRVLGRNTTHCPSYEDLCQLEYLECV 151
F G ++++ LL L + VL EE RVL PSY+ + QL+Y+ V
Sbjct: 261 FLIAGHESTSGLLSFALYFLVKNPHVLQKAAEEAARVL---VDPVPSYKQVKQLKYVGMV 317
Query: 152 IKETLRLFPAAPLIGRHIDEDFILDG 177
+ E LRL+P AP + ED +L G
Sbjct: 318 LNEALRLWPTAPAFSLYAKEDTVLGG 343
>pdb|4DTW|B Chain B, Cytochrome P450 Bm3h-8c8 Mri Sensor Bound To Serotonin
pdb|4DTW|A Chain A, Cytochrome P450 Bm3h-8c8 Mri Sensor Bound To Serotonin
pdb|4DTY|B Chain B, Cytochrome P450 Bm3h-8c8 Mri Sensor, No Ligand
pdb|4DTY|A Chain A, Cytochrome P450 Bm3h-8c8 Mri Sensor, No Ligand
pdb|4DTZ|A Chain A, Cytochrome P450 Bm3h-8c8 Mri Sensor Bound To Dopamine
pdb|4DTZ|B Chain B, Cytochrome P450 Bm3h-8c8 Mri Sensor Bound To Dopamine
Length = 469
Score = 54.7 bits (130), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 55/163 (33%), Positives = 73/163 (44%), Gaps = 23/163 (14%)
Query: 8 EEIDRVLGRNTTHCPSYEDLCQLEYLECVIKETLRLFPAAPLIGRHIDEDFILDG-LTIP 66
EE RVL PSY+ + QL+Y+ V+ E LRL+P AP + ED +L G +
Sbjct: 292 EEAARVL---VDPVPSYKQVKQLKYVGMVLNEALRLWPTAPAFSLYAKEDTVLGGEYPLE 348
Query: 67 AGVTVLISIYALHRDPKYYPS------PGRF-DPSRWMRFRFR--GDKTSAPLLELPLIP 117
G +++ I LHRD + P RF +PS + F+ G+ A I
Sbjct: 349 KGDELMVLIPQLHRDKTIWGDDVEEFRPERFENPSAIPQHAFKPFGNGQRA------CIG 402
Query: 118 TSFVLEEIDRVLGRNTTHCPSYEDLCQLEYLECVIKETLRLFP 160
F L E VLG H +ED E IKETL L P
Sbjct: 403 QQFALHEATLVLGMMLKHF-DFEDHTN---YELDIKETLTLKP 441
Score = 42.0 bits (97), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 23/55 (41%), Positives = 31/55 (56%), Gaps = 3/55 (5%)
Query: 123 EEIDRVLGRNTTHCPSYEDLCQLEYLECVIKETLRLFPAAPLIGRHIDEDFILDG 177
EE RVL PSY+ + QL+Y+ V+ E LRL+P AP + ED +L G
Sbjct: 292 EEAARVL---VDPVPSYKQVKQLKYVGMVLNEALRLWPTAPAFSLYAKEDTVLGG 343
>pdb|4DUC|A Chain A, Cytochrome P450 Bm3h-2g9 Mri Sensor, No Ligand
pdb|4DUC|B Chain B, Cytochrome P450 Bm3h-2g9 Mri Sensor, No Ligand
Length = 472
Score = 54.7 bits (130), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 56/169 (33%), Positives = 74/169 (43%), Gaps = 23/169 (13%)
Query: 2 VYPSVLEEIDRVLGRNTTHCPSYEDLCQLEYLECVIKETLRLFPAAPLIGRHIDEDFILD 61
V EE RVL PSY+ + QL+Y+ V+ E LRL+P AP + ED +L
Sbjct: 287 VLQKAAEEAARVL---VDPVPSYKQVKQLKYVGMVLNEALRLWPTAPAFSLYAKEDTVLG 343
Query: 62 G-LTIPAGVTVLISIYALHRDPKYYPS------PGRF-DPSRWMRFRFR--GDKTSAPLL 111
G + G +++ I LHRD + P RF +PS + F+ G+ A
Sbjct: 344 GEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERFENPSAIPQHAFKPFGNGQRA--- 400
Query: 112 ELPLIPTSFVLEEIDRVLGRNTTHCPSYEDLCQLEYLECVIKETLRLFP 160
I F L E VLG H +ED E IKETL L P
Sbjct: 401 ---CIGQQFALHEATLVLGMMLKHF-DFEDHTN---YELDIKETLLLKP 442
Score = 42.0 bits (97), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 30/86 (34%), Positives = 43/86 (50%), Gaps = 10/86 (11%)
Query: 99 FRFRGDKTSAPLLELPL---IPTSFVL----EEIDRVLGRNTTHCPSYEDLCQLEYLECV 151
F G ++++ LL L + VL EE RVL PSY+ + QL+Y+ V
Sbjct: 262 FLIAGHESTSGLLSFALYFLVKNPHVLQKAAEEAARVL---VDPVPSYKQVKQLKYVGMV 318
Query: 152 IKETLRLFPAAPLIGRHIDEDFILDG 177
+ E LRL+P AP + ED +L G
Sbjct: 319 LNEALRLWPTAPAFSLYAKEDTVLGG 344
>pdb|1ZOA|A Chain A, Crystal Structure Of A328v Mutant Of The Heme Domain Of
P450bm-3 With N-Palmitoylglycine
pdb|1ZOA|B Chain B, Crystal Structure Of A328v Mutant Of The Heme Domain Of
P450bm-3 With N-Palmitoylglycine
Length = 473
Score = 54.3 bits (129), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 59/193 (30%), Positives = 82/193 (42%), Gaps = 24/193 (12%)
Query: 2 VYPSVLEEIDRVLGRNTTHCPSYEDLCQLEYLECVIKETLRLFPAAPLIGRHIDEDFILD 61
V EE RVL PSY+ + QL+Y+ V+ E LRL+P P + ED +L
Sbjct: 289 VLQKAAEEAARVL---VDPVPSYKQVKQLKYVGMVLNEALRLWPTVPAFSLYAKEDTVLG 345
Query: 62 G-LTIPAGVTVLISIYALHRDPKYYPS------PGRF-DPSRWMRFRFR--GDKTSAPLL 111
G + G +++ I LHRD + P RF +PS + F+ G+ A
Sbjct: 346 GEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERFENPSAIPQHAFKPFGNGQRA--- 402
Query: 112 ELPLIPTSFVLEEIDRVLGRNTTHCPSYEDLCQLEYLECVIKETLRLFPAAPLIGRHIDE 171
I F L E VLG H +ED E IKETL L P + + +
Sbjct: 403 ---CIGQQFALHEATLVLGMMLKHF-DFEDHTN---YELDIKETLTLKPEG-FVVKAKSK 454
Query: 172 DFILDGLTIPAVE 184
L G+ P+ E
Sbjct: 455 KIPLGGIPSPSTE 467
>pdb|3KX4|A Chain A, Crystal Structure Of Bacillus Megaterium Bm3 Heme Domain
Mut
pdb|3KX4|B Chain B, Crystal Structure Of Bacillus Megaterium Bm3 Heme Domain
Mut
Length = 470
Score = 53.5 bits (127), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 58/191 (30%), Positives = 80/191 (41%), Gaps = 20/191 (10%)
Query: 2 VYPSVLEEIDRVLGRNTTHCPSYEDLCQLEYLECVIKETLRLFPAAPLIGRHIDEDFILD 61
V EE RVL PSY+ + QL+Y+ V+ E LRL+P AP + ED +L
Sbjct: 286 VLQKAAEEAARVL---VDPVPSYKQVKQLKYVGMVLNEALRLWPTAPAFSLYAKEDTVLG 342
Query: 62 G-LTIPAGVTVLISIYALHRDPKYYPS------PGRF-DPSRWMRFRFRGDKTSAPLLEL 113
G + G +++ I LHRD + P RF +PS + F+ E
Sbjct: 343 GEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERFENPSAIPQHAFKPFGNGQRACE- 401
Query: 114 PLIPTSFVLEEIDRVLGRNTTHCPSYEDLCQLEYLECVIKETLRLFPAAPLIGRHIDEDF 173
F L E VLG H +ED E IKETL L P + + +
Sbjct: 402 ---GQQFALHEATLVLGMMLKHF-DFEDHTN---YELDIKETLTLKPEG-FVVKAKSKKI 453
Query: 174 ILDGLTIPAVE 184
L G+ P+ E
Sbjct: 454 PLGGIPSPSTE 464
>pdb|3HF2|A Chain A, Crystal Structure Of The I401p Mutant Of Cytochrome P450
Bm3
pdb|3HF2|B Chain B, Crystal Structure Of The I401p Mutant Of Cytochrome P450
Bm3
Length = 482
Score = 53.5 bits (127), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 59/193 (30%), Positives = 82/193 (42%), Gaps = 24/193 (12%)
Query: 2 VYPSVLEEIDRVLGRNTTHCPSYEDLCQLEYLECVIKETLRLFPAAPLIGRHIDEDFILD 61
V EE RVL PSY+ + QL+Y+ V+ E LRL+P AP + ED +L
Sbjct: 287 VLQKAAEEAARVL---VDPVPSYKQVKQLKYVGMVLNEALRLWPTAPAFSLYAKEDTVLG 343
Query: 62 G-LTIPAGVTVLISIYALHRDPKYYPS------PGRF-DPSRWMRFRFR--GDKTSAPLL 111
G + G +++ I LHRD + P RF +PS + F+ G+ A
Sbjct: 344 GEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERFENPSAIPQHAFKPFGNGQRA--- 400
Query: 112 ELPLIPTSFVLEEIDRVLGRNTTHCPSYEDLCQLEYLECVIKETLRLFPAAPLIGRHIDE 171
F L E VLG H +ED E IKETL L P + + +
Sbjct: 401 ---CPGQQFALHEATLVLGMMLKHF-DFEDHTN---YELDIKETLTLKPEG-FVVKAKSK 452
Query: 172 DFILDGLTIPAVE 184
L G+ P+ E
Sbjct: 453 KIPLGGIPSPSTE 465
>pdb|4DUB|A Chain A, Cytochrome P450 Bm3h-9d7 Mri Sensor Bound To Dopamine
pdb|4DUB|B Chain B, Cytochrome P450 Bm3h-9d7 Mri Sensor Bound To Dopamine
Length = 472
Score = 53.5 bits (127), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 55/169 (32%), Positives = 73/169 (43%), Gaps = 23/169 (13%)
Query: 2 VYPSVLEEIDRVLGRNTTHCPSYEDLCQLEYLECVIKETLRLFPAAPLIGRHIDEDFILD 61
V EE RVL PSY+ + QL+Y+ V+ E LRL+P P + ED +L
Sbjct: 287 VLQKAAEEAARVL---VDPVPSYKQVKQLKYVGMVLNEALRLWPTGPAFSLYAKEDTVLG 343
Query: 62 G-LTIPAGVTVLISIYALHRDPKYYPS------PGRF-DPSRWMRFRFR--GDKTSAPLL 111
G + G +++ I LHRD + P RF +PS + F+ G+ A
Sbjct: 344 GEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERFENPSAIPQHAFKPFGNGQRA--- 400
Query: 112 ELPLIPTSFVLEEIDRVLGRNTTHCPSYEDLCQLEYLECVIKETLRLFP 160
I F L E VLG H +ED E IKETL L P
Sbjct: 401 ---CIGQQFALHEATLVLGMMLKHF-DFEDHTN---YELDIKETLVLKP 442
Score = 40.4 bits (93), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 22/55 (40%), Positives = 30/55 (54%), Gaps = 3/55 (5%)
Query: 123 EEIDRVLGRNTTHCPSYEDLCQLEYLECVIKETLRLFPAAPLIGRHIDEDFILDG 177
EE RVL PSY+ + QL+Y+ V+ E LRL+P P + ED +L G
Sbjct: 293 EEAARVL---VDPVPSYKQVKQLKYVGMVLNEALRLWPTGPAFSLYAKEDTVLGG 344
>pdb|4DUA|A Chain A, Cytochrome P450 Bm3h-9d7 Mri Sensor, No Ligand
pdb|4DUA|B Chain B, Cytochrome P450 Bm3h-9d7 Mri Sensor, No Ligand
Length = 471
Score = 53.1 bits (126), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 55/169 (32%), Positives = 73/169 (43%), Gaps = 23/169 (13%)
Query: 2 VYPSVLEEIDRVLGRNTTHCPSYEDLCQLEYLECVIKETLRLFPAAPLIGRHIDEDFILD 61
V EE RVL PSY+ + QL+Y+ V+ E LRL+P P + ED +L
Sbjct: 286 VLQKAAEEAARVL---VDPVPSYKQVKQLKYVGMVLNEALRLWPTGPAFSLYAKEDTVLG 342
Query: 62 G-LTIPAGVTVLISIYALHRDPKYYPS------PGRF-DPSRWMRFRFR--GDKTSAPLL 111
G + G +++ I LHRD + P RF +PS + F+ G+ A
Sbjct: 343 GEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERFENPSAIPQHAFKPFGNGQRA--- 399
Query: 112 ELPLIPTSFVLEEIDRVLGRNTTHCPSYEDLCQLEYLECVIKETLRLFP 160
I F L E VLG H +ED E IKETL L P
Sbjct: 400 ---CIGQQFALHEATLVLGMMLKHF-DFEDHTN---YELDIKETLVLKP 441
Score = 40.4 bits (93), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 22/55 (40%), Positives = 30/55 (54%), Gaps = 3/55 (5%)
Query: 123 EEIDRVLGRNTTHCPSYEDLCQLEYLECVIKETLRLFPAAPLIGRHIDEDFILDG 177
EE RVL PSY+ + QL+Y+ V+ E LRL+P P + ED +L G
Sbjct: 292 EEAARVL---VDPVPSYKQVKQLKYVGMVLNEALRLWPTGPAFSLYAKEDTVLGG 343
>pdb|4DU2|B Chain B, Cytochrome P450 Bm3h-B7 Mri Sensor Bound To Dopamine
pdb|4DU2|A Chain A, Cytochrome P450 Bm3h-B7 Mri Sensor Bound To Dopamine
Length = 470
Score = 53.1 bits (126), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 54/163 (33%), Positives = 73/163 (44%), Gaps = 23/163 (14%)
Query: 8 EEIDRVLGRNTTHCPSYEDLCQLEYLECVIKETLRLFPAAPLIGRHIDEDFILDG-LTIP 66
EE RVL PS++ + QL+Y+ V+ E LRL+P AP + ED +L G +
Sbjct: 293 EEAARVL---VDPVPSHKQVKQLKYVGMVLNEALRLWPTAPAFSLYAKEDTVLGGEYPLE 349
Query: 67 AGVTVLISIYALHRDPKYYPS------PGRF-DPSRWMRFRFR--GDKTSAPLLELPLIP 117
G +++ I LHRD + P RF +PS + F+ G+ A I
Sbjct: 350 KGDELMVLIPQLHRDKTVWGDDVEEFRPERFENPSAIPQHAFKPFGNGQRA------CIG 403
Query: 118 TSFVLEEIDRVLGRNTTHCPSYEDLCQLEYLECVIKETLRLFP 160
F L E VLG H +ED E IKETL L P
Sbjct: 404 QQFALHEATLVLGMMLKHF-DFEDHTN---YELDIKETLTLKP 442
Score = 40.0 bits (92), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 22/55 (40%), Positives = 31/55 (56%), Gaps = 3/55 (5%)
Query: 123 EEIDRVLGRNTTHCPSYEDLCQLEYLECVIKETLRLFPAAPLIGRHIDEDFILDG 177
EE RVL PS++ + QL+Y+ V+ E LRL+P AP + ED +L G
Sbjct: 293 EEAARVL---VDPVPSHKQVKQLKYVGMVLNEALRLWPTAPAFSLYAKEDTVLGG 344
>pdb|3R9C|A Chain A, Crystal Structure Of Mycobacterium Smegmatis Cyp164a2 With
Econazole Bound
pdb|3R9B|A Chain A, Crystal Structure Of Mycobacterium Smegmatis Cyp164a2 In
Ligand Free State
pdb|3R9B|B Chain B, Crystal Structure Of Mycobacterium Smegmatis Cyp164a2 In
Ligand Free State
pdb|3R9B|C Chain C, Crystal Structure Of Mycobacterium Smegmatis Cyp164a2 In
Ligand Free State
Length = 418
Score = 53.1 bits (126), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 25/62 (40%), Positives = 36/62 (58%)
Query: 34 ECVIKETLRLFPAAPLIGRHIDEDFILDGLTIPAGVTVLISIYALHRDPKYYPSPGRFDP 93
VI+ET+R P L+ R+ +D + T+P G T+L+ + A HRDP +P RFDP
Sbjct: 290 SAVIEETMRYDPPVQLVSRYAGDDLTIGTHTVPKGDTMLLLLAAAHRDPTIVGAPDRFDP 349
Query: 94 SR 95
R
Sbjct: 350 DR 351
>pdb|3QI8|B Chain B, Evolved Variant Of Cytochrome P450 (Bm3, Cyp102a1)
pdb|3QI8|A Chain A, Evolved Variant Of Cytochrome P450 (Bm3, Cyp102a1)
Length = 472
Score = 53.1 bits (126), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 55/174 (31%), Positives = 76/174 (43%), Gaps = 23/174 (13%)
Query: 2 VYPSVLEEIDRVLGRNTTHCPSYEDLCQLEYLECVIKETLRLFPAAPLIGRHIDEDFILD 61
V EE RVL PSY+ + QL+Y+ V+ E LR++P AP + ED +L
Sbjct: 287 VLQKAAEEAARVL---VDPVPSYKQVKQLKYVGMVLNEALRIWPTAPAFSLYAKEDTMLG 343
Query: 62 G-LTIPAGVTVLISIYALHRDPKYYPS------PGRF-DPSRWMRFRFR--GDKTSAPLL 111
G + G +++ I LHRD + P RF +PS + F+ G+ A
Sbjct: 344 GEYPLEKGDELMVLIPQLHRDKTVWGDDVEEFRPERFENPSAIPQHAFKPFGNGQRA--- 400
Query: 112 ELPLIPTSFVLEEIDRVLGRNTTHCPSYEDLCQLEYLECVIKETLRLFPAAPLI 165
I F L E VLG H +ED E I+ETL L P +I
Sbjct: 401 ---CIGQQFALHEATLVLGMMLKHF-DFEDHTN---YELDIEETLTLKPKGFVI 447
Score = 41.6 bits (96), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 30/86 (34%), Positives = 43/86 (50%), Gaps = 10/86 (11%)
Query: 99 FRFRGDKTSAPLLELPL---IPTSFVL----EEIDRVLGRNTTHCPSYEDLCQLEYLECV 151
F G +T++ LL L + VL EE RVL PSY+ + QL+Y+ V
Sbjct: 262 FLIAGHETTSGLLTFALYFLVKNPHVLQKAAEEAARVL---VDPVPSYKQVKQLKYVGMV 318
Query: 152 IKETLRLFPAAPLIGRHIDEDFILDG 177
+ E LR++P AP + ED +L G
Sbjct: 319 LNEALRIWPTAPAFSLYAKEDTMLGG 344
>pdb|4DUD|A Chain A, Cytochrome P450 Bm3h-2g9c6 Mri Sensor, No Ligand
pdb|4DUD|B Chain B, Cytochrome P450 Bm3h-2g9c6 Mri Sensor, No Ligand
pdb|4DUE|A Chain A, Cytochrome P450 Bm3h-2g9c6 Mri Sensor Bound To Serotonin
pdb|4DUE|B Chain B, Cytochrome P450 Bm3h-2g9c6 Mri Sensor Bound To Serotonin
Length = 471
Score = 52.8 bits (125), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 55/169 (32%), Positives = 73/169 (43%), Gaps = 23/169 (13%)
Query: 2 VYPSVLEEIDRVLGRNTTHCPSYEDLCQLEYLECVIKETLRLFPAAPLIGRHIDEDFILD 61
V EE RVL PSY+ + QL+Y+ V+ E LRL+P AP + ED +L
Sbjct: 286 VLQKAAEEAARVL---VDPVPSYKQVKQLKYVGMVLNEALRLWPTAPAFSLYAKEDTVLG 342
Query: 62 G-LTIPAGVTVLISIYALHRDPKYYPS------PGRF-DPSRWMRFRFR--GDKTSAPLL 111
G + G +++ I LHRD + P RF +PS + F+ G+ A
Sbjct: 343 GEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERFENPSAIPQHAFKPFGNGQRA--- 399
Query: 112 ELPLIPTSFVLEEIDRVLGRNTTHCPSYEDLCQLEYLECVIKETLRLFP 160
I F L E VLG H +ED E IKET L P
Sbjct: 400 ---CIGQQFALHEATLVLGMMLKHF-DFEDHTN---YELDIKETQLLKP 441
Score = 42.0 bits (97), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 30/86 (34%), Positives = 43/86 (50%), Gaps = 10/86 (11%)
Query: 99 FRFRGDKTSAPLLELPL---IPTSFVL----EEIDRVLGRNTTHCPSYEDLCQLEYLECV 151
F G ++++ LL L + VL EE RVL PSY+ + QL+Y+ V
Sbjct: 261 FLIAGHESTSGLLSFALYFLVKNPHVLQKAAEEAARVL---VDPVPSYKQVKQLKYVGMV 317
Query: 152 IKETLRLFPAAPLIGRHIDEDFILDG 177
+ E LRL+P AP + ED +L G
Sbjct: 318 LNEALRLWPTAPAFSLYAKEDTVLGG 343
>pdb|4GQS|A Chain A, Structure Of Human Microsomal Cytochrome P450 (cyp) 2c19
pdb|4GQS|B Chain B, Structure Of Human Microsomal Cytochrome P450 (cyp) 2c19
pdb|4GQS|C Chain C, Structure Of Human Microsomal Cytochrome P450 (cyp) 2c19
pdb|4GQS|D Chain D, Structure Of Human Microsomal Cytochrome P450 (cyp) 2c19
Length = 477
Score = 52.4 bits (124), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 32/97 (32%), Positives = 48/97 (49%), Gaps = 3/97 (3%)
Query: 2 VYPSVLEEIDRVLGRNTTHCPSYEDLCQLEYLECVIKETLRLFPAAPLIGRH-IDEDFIL 60
V V EEI+RV+GRN + C +D + Y + V+ E R P H + D
Sbjct: 302 VTAKVQEEIERVVGRNRSPC--MQDRGHMPYTDAVVHEVQRYIDLIPTSLPHAVTCDVKF 359
Query: 61 DGLTIPAGVTVLISIYALHRDPKYYPSPGRFDPSRWM 97
IP G T+L S+ ++ D K +P+P FDP ++
Sbjct: 360 RNYLIPKGTTILTSLTSVLHDNKEFPNPEMFDPRHFL 396
Score = 31.2 bits (69), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 17/46 (36%), Positives = 25/46 (54%), Gaps = 2/46 (4%)
Query: 118 TSFVLEEIDRVLGRNTTHCPSYEDLCQLEYLECVIKETLRLFPAAP 163
T+ V EEI+RV+GRN + C +D + Y + V+ E R P
Sbjct: 303 TAKVQEEIERVVGRNRSPC--MQDRGHMPYTDAVVHEVQRYIDLIP 346
>pdb|2VE3|A Chain A, Retinoic Acid Bound Cyanobacterial Cyp120a1
pdb|2VE3|B Chain B, Retinoic Acid Bound Cyanobacterial Cyp120a1
pdb|2VE4|A Chain A, Substrate Free Cyanobacterial Cyp120a1
pdb|2VE4|B Chain B, Substrate Free Cyanobacterial Cyp120a1
Length = 444
Score = 50.8 bits (120), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 27/74 (36%), Positives = 37/74 (50%)
Query: 23 SYEDLCQLEYLECVIKETLRLFPAAPLIGRHIDEDFILDGLTIPAGVTVLISIYALHRDP 82
+ E L ++ YL+ V++E LRL P R + +D G P G V I H DP
Sbjct: 294 TAETLKKMPYLDQVLQEVLRLIPPVGGGFRELIQDCQFQGFHFPKGWLVSYQISQTHADP 353
Query: 83 KYYPSPGRFDPSRW 96
YP P +FDP R+
Sbjct: 354 DLYPDPEKFDPERF 367
>pdb|1DT6|A Chain A, Structure Of Mammalian Cytochrome P450 2c5
pdb|1N6B|A Chain A, Microsomal Cytochrome P450 2c5/3lvdh Complex With A
Dimethyl Derivative Of Sulfaphenazole
pdb|1NR6|A Chain A, Microsomal Cytochrome P450 2c53LVDH COMPLEX WITH
DICLOFENAC
Length = 473
Score = 49.7 bits (117), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 30/97 (30%), Positives = 48/97 (49%), Gaps = 3/97 (3%)
Query: 2 VYPSVLEEIDRVLGRNTTHCPSYEDLCQLEYLECVIKETLRLFPAAPLIGRH-IDEDFIL 60
V V EEI+RV+GR+ + C +D ++ Y + VI E R P H + D
Sbjct: 298 VAARVQEEIERVIGRHRSPC--MQDRSRMPYTDAVIHEIQRFIDLLPTNLPHAVTRDVRF 355
Query: 61 DGLTIPAGVTVLISIYALHRDPKYYPSPGRFDPSRWM 97
IP G ++ S+ ++ D K +P+P FDP ++
Sbjct: 356 RNYFIPKGTDIITSLTSVLHDEKAFPNPKVFDPGHFL 392
Score = 29.3 bits (64), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 16/43 (37%), Positives = 24/43 (55%), Gaps = 2/43 (4%)
Query: 121 VLEEIDRVLGRNTTHCPSYEDLCQLEYLECVIKETLRLFPAAP 163
V EEI+RV+GR+ + C +D ++ Y + VI E R P
Sbjct: 302 VQEEIERVIGRHRSPC--MQDRSRMPYTDAVIHEIQRFIDLLP 342
>pdb|4I8V|A Chain A, Human Cytochrome P450 1a1 In Complex With
Alpha-naphthoflavone
pdb|4I8V|B Chain B, Human Cytochrome P450 1a1 In Complex With
Alpha-naphthoflavone
pdb|4I8V|C Chain C, Human Cytochrome P450 1a1 In Complex With
Alpha-naphthoflavone
pdb|4I8V|D Chain D, Human Cytochrome P450 1a1 In Complex With
Alpha-naphthoflavone
Length = 491
Score = 48.9 bits (115), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 31/97 (31%), Positives = 45/97 (46%), Gaps = 3/97 (3%)
Query: 2 VYPSVLEEIDRVLGRNTTHCPSYEDLCQLEYLECVIKETLRLFPAAPLIGRH-IDEDFIL 60
V + EE+D V+GR + P D L Y+E I ET R P H D L
Sbjct: 312 VQRKIQEELDTVIGR--SRRPRLSDRSHLPYMEAFILETFRHSSFVPFTIPHSTTRDTSL 369
Query: 61 DGLTIPAGVTVLISIYALHRDPKYYPSPGRFDPSRWM 97
G IP G V ++ + ++ D K + +P F P R++
Sbjct: 370 KGFYIPKGRCVFVNQWQINHDQKLWVNPSEFLPERFL 406
>pdb|2HI4|A Chain A, Crystal Structure Of Human Microsomal P450 1a2 In Complex
With Alpha-Naphthoflavone
Length = 495
Score = 48.1 bits (113), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 30/94 (31%), Positives = 44/94 (46%), Gaps = 3/94 (3%)
Query: 5 SVLEEIDRVLGRNTTHCPSYEDLCQLEYLECVIKETLRLFPAAPL-IGRHIDEDFILDGL 63
+ +E+D V+GR P D QL YLE I ET R P I D L+G
Sbjct: 318 KIQKELDTVIGRERR--PRLSDRPQLPYLEAFILETFRHSSFLPFTIPHSTTRDTTLNGF 375
Query: 64 TIPAGVTVLISIYALHRDPKYYPSPGRFDPSRWM 97
IP V ++ + ++ DP+ + P F P R++
Sbjct: 376 YIPKKCCVFVNQWQVNHDPELWEDPSEFRPERFL 409
>pdb|1IZO|A Chain A, Cytochrome P450 Bs Beta Complexed With Fatty Acid
pdb|1IZO|B Chain B, Cytochrome P450 Bs Beta Complexed With Fatty Acid
pdb|1IZO|C Chain C, Cytochrome P450 Bs Beta Complexed With Fatty Acid
pdb|2ZQX|A Chain A, Cytochrome P450bsbeta Cocrystallized With Heptanoic Acid
pdb|2ZQX|B Chain B, Cytochrome P450bsbeta Cocrystallized With Heptanoic Acid
pdb|2ZQX|C Chain C, Cytochrome P450bsbeta Cocrystallized With Heptanoic Acid
pdb|2ZQJ|A Chain A, Substrate-Free Form Of Cytochrome P450bsbeta
pdb|2ZQJ|B Chain B, Substrate-Free Form Of Cytochrome P450bsbeta
pdb|2ZQJ|C Chain C, Substrate-Free Form Of Cytochrome P450bsbeta
Length = 417
Score = 48.1 bits (113), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 18/62 (29%), Positives = 32/62 (51%)
Query: 34 ECVIKETLRLFPAAPLIGRHIDEDFILDGLTIPAGVTVLISIYALHRDPKYYPSPGRFDP 93
E ++E R +P P +G + +DF+ + G +VL+ +Y + DP+ + P F P
Sbjct: 277 EMFVQEVRRYYPFGPFLGALVKKDFVWNNCEFKKGTSVLLDLYGTNHDPRLWDHPDEFRP 336
Query: 94 SR 95
R
Sbjct: 337 ER 338
>pdb|1EA1|A Chain A, Cytochrome P450 14 Alpha-Sterol Demethylase (Cyp51) From
Mycobacterium Tuberculosis In Complex With Fluconazole
pdb|1E9X|A Chain A, Cytochrome P450 14 Alpha-Sterol Demethylase (Cyp51) From
Mycobacterium Tuberculosis In Complex With 4-
Phenylimidazole
pdb|1H5Z|A Chain A, Cytochrome P450 14 Alpha-Sterol Demethylase (Cyp51) From
Mycobacterium Tuberculosis In Ferric Low-Spin State
Length = 455
Score = 47.8 bits (112), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 32/95 (33%), Positives = 50/95 (52%), Gaps = 2/95 (2%)
Query: 2 VYPSVLEEIDRVLGRNTTHCPSYEDLCQLEYLECVIKETLRLFPAAPLIGRHIDEDFILD 61
Y +V++E+D + G + S+ L Q+ LE V+KETLRL P ++ R +F +
Sbjct: 278 AYAAVIDELDELYGDGRS--VSFHALRQIPQLENVLKETLRLHPPLIILMRVAKGEFEVQ 335
Query: 62 GLTIPAGVTVLISIYALHRDPKYYPSPGRFDPSRW 96
G I G V S +R P+ +P P F P+R+
Sbjct: 336 GHRIHEGDLVAASPAISNRIPEDFPDPHDFVPARY 370
Score = 32.7 bits (73), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 27/87 (31%), Positives = 41/87 (47%), Gaps = 9/87 (10%)
Query: 101 FRGDKTSAPLLELPLI-------PTSFVLEEIDRVLGRNTTHCPSYEDLCQLEYLECVIK 153
F G TS+ LI + V++E+D + G + S+ L Q+ LE V+K
Sbjct: 255 FAGHHTSSGTASWTLIELMRHRDAYAAVIDELDELYGDGRS--VSFHALRQIPQLENVLK 312
Query: 154 ETLRLFPAAPLIGRHIDEDFILDGLTI 180
ETLRL P ++ R +F + G I
Sbjct: 313 ETLRLHPPLIILMRVAKGEFEVQGHRI 339
>pdb|1X8V|A Chain A, Estriol-Bound And Ligand-Free Structures Of Sterol
14alpha- Demethylase (Cyp51)
pdb|2BZ9|A Chain A, Ligand-Free Structure Of Sterol 14alpha-Demethylase From
Mycobacterium Tuberculosis In P2(1) Space Group
pdb|2BZ9|B Chain B, Ligand-Free Structure Of Sterol 14alpha-Demethylase From
Mycobacterium Tuberculosis In P2(1) Space Group
pdb|2CI0|A Chain A, High Throughput Screening And X-Ray Crystallography
Assisted Evaluation Of Small Molecule Scaffolds For
Cyp51 Inhibitors
pdb|2CIB|A Chain A, High Throughput Screening And X-Ray Crystallography
Assisted Evaluation Of Small Molecule Scaffolds For
Cyp51 Inhibitors
pdb|2VKU|A Chain A, 4,4'-Dihydroxybenzophenone Mimics Sterol Substrate In The
Binding Site Of Sterol 14alpha-Demethylase (Cyp51) In
The X-Ray Structure Of The Complex
pdb|2W09|A Chain A, Cyp51 Of M. Tuberculosis Bound To An Inhibitor Cis-4-
Methyl-N-[(1s)-3-(Methylsulfanyl)-1-(Pyridin-4-
Ylcarbamoyl)propyl]cyclohexanecarboxamide
pdb|2W0B|A Chain A, Cyp51 Of M. Tuberculosis Bound To An Inhibitor 3-{[(4-
Methylphenyl)sulfonyl]amino}propyl Pyridin-4-Ylcarbamate
Length = 455
Score = 47.8 bits (112), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 32/95 (33%), Positives = 50/95 (52%), Gaps = 2/95 (2%)
Query: 2 VYPSVLEEIDRVLGRNTTHCPSYEDLCQLEYLECVIKETLRLFPAAPLIGRHIDEDFILD 61
Y +V++E+D + G + S+ L Q+ LE V+KETLRL P ++ R +F +
Sbjct: 278 AYAAVIDELDELYGDGRS--VSFHALRQIPQLENVLKETLRLHPPLIILMRVAKGEFEVQ 335
Query: 62 GLTIPAGVTVLISIYALHRDPKYYPSPGRFDPSRW 96
G I G V S +R P+ +P P F P+R+
Sbjct: 336 GHRIHEGDLVAASPAISNRIPEDFPDPHDFVPARY 370
Score = 32.7 bits (73), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 27/87 (31%), Positives = 41/87 (47%), Gaps = 9/87 (10%)
Query: 101 FRGDKTSAPLLELPLI-------PTSFVLEEIDRVLGRNTTHCPSYEDLCQLEYLECVIK 153
F G TS+ LI + V++E+D + G + S+ L Q+ LE V+K
Sbjct: 255 FAGHHTSSGTASWTLIELMRHRDAYAAVIDELDELYGDGRS--VSFHALRQIPQLENVLK 312
Query: 154 ETLRLFPAAPLIGRHIDEDFILDGLTI 180
ETLRL P ++ R +F + G I
Sbjct: 313 ETLRLHPPLIILMRVAKGEFEVQGHRI 339
>pdb|2W0A|A Chain A, Cyp51 Of M. Tuberculosis Bound To An Inhibitor
N-[(1s)-2-Methyl-1-(Pyridin-4-Ylcarbamoyl)propyl]
Cyclohexanecarboxamide
Length = 455
Score = 47.8 bits (112), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 32/95 (33%), Positives = 50/95 (52%), Gaps = 2/95 (2%)
Query: 2 VYPSVLEEIDRVLGRNTTHCPSYEDLCQLEYLECVIKETLRLFPAAPLIGRHIDEDFILD 61
Y +V++E+D + G + S+ L Q+ LE V+KETLRL P ++ R +F +
Sbjct: 278 AYAAVIDELDELYGDGRS--VSFHALRQIPQLENVLKETLRLHPPLIILMRVAKGEFEVQ 335
Query: 62 GLTIPAGVTVLISIYALHRDPKYYPSPGRFDPSRW 96
G I G V S +R P+ +P P F P+R+
Sbjct: 336 GHRIHEGDLVAASPAISNRIPEDFPDPHDFVPARY 370
Score = 32.7 bits (73), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 27/87 (31%), Positives = 41/87 (47%), Gaps = 9/87 (10%)
Query: 101 FRGDKTSAPLLELPLI-------PTSFVLEEIDRVLGRNTTHCPSYEDLCQLEYLECVIK 153
F G TS+ LI + V++E+D + G + S+ L Q+ LE V+K
Sbjct: 255 FAGHHTSSGTASWTLIELMRHRDAYAAVIDELDELYGDGRS--VSFHALRQIPQLENVLK 312
Query: 154 ETLRLFPAAPLIGRHIDEDFILDGLTI 180
ETLRL P ++ R +F + G I
Sbjct: 313 ETLRLHPPLIILMRVAKGEFEVQGHRI 339
>pdb|1PQ2|A Chain A, Crystal Structure Of Human Drug Metabolizing Cytochrome
P450 2c8
pdb|1PQ2|B Chain B, Crystal Structure Of Human Drug Metabolizing Cytochrome
P450 2c8
pdb|2NNH|A Chain A, Cyp2c8dh Complexed With 2 Molecules Of 9-Cis Retinoic Acid
pdb|2NNH|B Chain B, Cyp2c8dh Complexed With 2 Molecules Of 9-Cis Retinoic Acid
pdb|2NNI|A Chain A, Cyp2c8dh Complexed With Montelukast
pdb|2NNJ|A Chain A, Cyp2c8dh Complexed With Felodipine
pdb|2VN0|A Chain A, Cyp2c8dh Complexed With Troglitazone
Length = 476
Score = 47.8 bits (112), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 29/97 (29%), Positives = 46/97 (47%), Gaps = 3/97 (3%)
Query: 2 VYPSVLEEIDRVLGRNTTHCPSYEDLCQLEYLECVIKETLRLFPAAPLIGRH-IDEDFIL 60
V V EEID V+GR+ + C +D + Y + V+ E R P H + D
Sbjct: 301 VTAKVQEEIDHVIGRHRSPC--MQDRSHMPYTDAVVHEIQRYSDLVPTGVPHAVTTDTKF 358
Query: 61 DGLTIPAGVTVLISIYALHRDPKYYPSPGRFDPSRWM 97
IP G T++ + ++ D K +P+P FDP ++
Sbjct: 359 RNYLIPKGTTIMALLTSVLHDDKEFPNPNIFDPGHFL 395
Score = 28.9 bits (63), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 15/40 (37%), Positives = 23/40 (57%), Gaps = 2/40 (5%)
Query: 118 TSFVLEEIDRVLGRNTTHCPSYEDLCQLEYLECVIKETLR 157
T+ V EEID V+GR+ + C +D + Y + V+ E R
Sbjct: 302 TAKVQEEIDHVIGRHRSPC--MQDRSHMPYTDAVVHEIQR 339
>pdb|1U13|A Chain A, Crystal Structure Analysis Of The C37lC151TC442A-Triple
Mutant Of Cyp51 From Mycobacterium Tuberculosis
Length = 455
Score = 47.8 bits (112), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 32/95 (33%), Positives = 50/95 (52%), Gaps = 2/95 (2%)
Query: 2 VYPSVLEEIDRVLGRNTTHCPSYEDLCQLEYLECVIKETLRLFPAAPLIGRHIDEDFILD 61
Y +V++E+D + G + S+ L Q+ LE V+KETLRL P ++ R +F +
Sbjct: 278 AYAAVIDELDELYGDGRS--VSFHALRQIPQLENVLKETLRLHPPLIILMRVAKGEFEVQ 335
Query: 62 GLTIPAGVTVLISIYALHRDPKYYPSPGRFDPSRW 96
G I G V S +R P+ +P P F P+R+
Sbjct: 336 GHRIHEGDLVAASPAISNRIPEDFPDPHDFVPARY 370
Score = 32.7 bits (73), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 27/87 (31%), Positives = 41/87 (47%), Gaps = 9/87 (10%)
Query: 101 FRGDKTSAPLLELPLI-------PTSFVLEEIDRVLGRNTTHCPSYEDLCQLEYLECVIK 153
F G TS+ LI + V++E+D + G + S+ L Q+ LE V+K
Sbjct: 255 FAGHHTSSGTASWTLIELMRHRDAYAAVIDELDELYGDGRS--VSFHALRQIPQLENVLK 312
Query: 154 ETLRLFPAAPLIGRHIDEDFILDGLTI 180
ETLRL P ++ R +F + G I
Sbjct: 313 ETLRLHPPLIILMRVAKGEFEVQGHRI 339
>pdb|3EQM|A Chain A, Crystal Structure Of Human Placental Aromatase Cytochrome
P450 In Complex With Androstenedione
pdb|3S79|A Chain A, Human Placental Aromatase Cytochrome P450 (Cyp19a1)
Refined At 2.75 Angstrom
pdb|3S7S|A Chain A, Crystal Structure Of Human Placental Aromatase Complexed
With Breast Cancer Drug Exemestane
pdb|4GL5|A Chain A, Structure Of Human Placental Aromatase Complexed With
Designed Inhibitor Hddg029 (Compound 4)
pdb|4GL7|A Chain A, Structure Of Human Placental Aromatase Complexed With
Designed Inhibitor Hddg046 (Compound 5)
Length = 503
Score = 47.4 bits (111), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 25/90 (27%), Positives = 49/90 (54%), Gaps = 4/90 (4%)
Query: 2 VYPSVLEEIDRVLGRNTTHCPSYEDLCQLEYLECVIKETLRLFPAAPLIGRHIDEDFILD 61
V ++++EI V+G +D+ +L+ +E I E++R P L+ R ED ++D
Sbjct: 328 VEEAIIKEIQTVIGERDIKI---DDIQKLKVMENFIYESMRYQPVVDLVMRKALEDDVID 384
Query: 62 GLTIPAGVTVLISIYALHRDPKYYPSPGRF 91
G + G ++++I +HR +++P P F
Sbjct: 385 GYPVKKGTNIILNIGRMHR-LEFFPKPNEF 413
>pdb|3AWP|A Chain A, Cytochrome P450sp Alpha (Cyp152b1) Mutant F288g
Length = 415
Score = 45.8 bits (107), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 19/67 (28%), Positives = 32/67 (47%)
Query: 29 QLEYLECVIKETLRLFPAAPLIGRHIDEDFILDGLTIPAGVTVLISIYALHRDPKYYPSP 88
Q +Y E ++E R +P P + +DF +G+ P G V++ +Y + D + P
Sbjct: 270 QPDYAELFVQEVRRFYPFGPAVVARASQDFEWEGMAFPEGRQVVLDLYGSNHDAATWADP 329
Query: 89 GRFDPSR 95
F P R
Sbjct: 330 QEFRPER 336
Score = 29.6 bits (65), Expect = 0.97, Method: Compositional matrix adjust.
Identities = 11/38 (28%), Positives = 19/38 (50%)
Query: 144 QLEYLECVIKETLRLFPAAPLIGRHIDEDFILDGLTIP 181
Q +Y E ++E R +P P + +DF +G+ P
Sbjct: 270 QPDYAELFVQEVRRFYPFGPAVVARASQDFEWEGMAFP 307
>pdb|3E4E|A Chain A, Human Cytochrome P450 2e1 In Complex With The Inhibitor 4-
Methylpyrazole
pdb|3E4E|B Chain B, Human Cytochrome P450 2e1 In Complex With The Inhibitor 4-
Methylpyrazole
pdb|3E6I|A Chain A, Human Cytochrome P450 2e1 In Complex With The Inhibitor
Indazole
pdb|3E6I|B Chain B, Human Cytochrome P450 2e1 In Complex With The Inhibitor
Indazole
pdb|3GPH|A Chain A, Human Cytochrome P450 2e1 In Complex With
Omega-Imidazolyl-Decanoic Acid
pdb|3GPH|B Chain B, Human Cytochrome P450 2e1 In Complex With
Omega-Imidazolyl-Decanoic Acid
pdb|3KOH|A Chain A, Cytochrome P450 2e1 With Omega-Imidazolyl Octanoic Acid
pdb|3KOH|B Chain B, Cytochrome P450 2e1 With Omega-Imidazolyl Octanoic Acid
pdb|3LC4|A Chain A, Human Cytochrome P450 2e1 In Complex With
Omega-Imidazolyl-Dodecanoic Acid
pdb|3LC4|B Chain B, Human Cytochrome P450 2e1 In Complex With
Omega-Imidazolyl-Dodecanoic Acid
pdb|3T3Z|A Chain A, Human Cytochrome P450 2e1 In Complex With Pilocarpine
pdb|3T3Z|B Chain B, Human Cytochrome P450 2e1 In Complex With Pilocarpine
pdb|3T3Z|C Chain C, Human Cytochrome P450 2e1 In Complex With Pilocarpine
pdb|3T3Z|D Chain D, Human Cytochrome P450 2e1 In Complex With Pilocarpine
Length = 476
Score = 45.8 bits (107), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 30/103 (29%), Positives = 50/103 (48%), Gaps = 7/103 (6%)
Query: 1 MVYPSV----LEEIDRVLGRNTTHCPSYEDLCQLEYLECVIKETLRLFPAAPLIGRH-ID 55
M YP + EEIDRV+G + P+ +D ++ Y++ V+ E R P H
Sbjct: 295 MKYPEIEEKLHEEIDRVIG--PSRIPAIKDRQEMPYMDAVVHEIQRFITLVPSNLPHEAT 352
Query: 56 EDFILDGLTIPAGVTVLISIYALHRDPKYYPSPGRFDPSRWMR 98
D I G IP G V+ ++ ++ D + +P P +F P ++
Sbjct: 353 RDTIFRGYLIPKGTVVVPTLDSVLYDNQEFPDPEKFKPEHFLN 395
>pdb|3ABB|A Chain A, Crystal Structure Of Cyp105d6
Length = 408
Score = 45.4 bits (106), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 26/66 (39%), Positives = 35/66 (53%)
Query: 33 LECVIKETLRLFPAAPLIGRHIDEDFILDGLTIPAGVTVLISIYALHRDPKYYPSPGRFD 92
+ V++E LR + I R ED + G TI AG VL+SI ++RD K Y +P FD
Sbjct: 276 VSGVVEELLRFTSVSDHIVRMAKEDIEVGGATIKAGDAVLVSITLMNRDAKAYENPDIFD 335
Query: 93 PSRWMR 98
R R
Sbjct: 336 ARRNAR 341
>pdb|3VNO|A Chain A, Cytochrome P450sp Alpha (cyp152b1) Mutant R241e
Length = 407
Score = 44.7 bits (104), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 19/67 (28%), Positives = 32/67 (47%)
Query: 29 QLEYLECVIKETLRLFPAAPLIGRHIDEDFILDGLTIPAGVTVLISIYALHRDPKYYPSP 88
Q +Y E ++E R +P P + +DF +G+ P G V++ +Y + D + P
Sbjct: 262 QPDYAELFVQEVRRFYPFFPAVVARASQDFEWEGMAFPEGRQVVLDLYGSNHDAATWADP 321
Query: 89 GRFDPSR 95
F P R
Sbjct: 322 QEFRPER 328
Score = 28.1 bits (61), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 11/38 (28%), Positives = 19/38 (50%)
Query: 144 QLEYLECVIKETLRLFPAAPLIGRHIDEDFILDGLTIP 181
Q +Y E ++E R +P P + +DF +G+ P
Sbjct: 262 QPDYAELFVQEVRRFYPFFPAVVARASQDFEWEGMAFP 299
>pdb|3VOO|A Chain A, Cytochrome P450sp Alpha (cyp152b1) Mutant A245e
Length = 407
Score = 44.7 bits (104), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 19/67 (28%), Positives = 32/67 (47%)
Query: 29 QLEYLECVIKETLRLFPAAPLIGRHIDEDFILDGLTIPAGVTVLISIYALHRDPKYYPSP 88
Q +Y E ++E R +P P + +DF +G+ P G V++ +Y + D + P
Sbjct: 262 QPDYAELFVQEVRRFYPFFPAVVARASQDFEWEGMAFPEGRQVVLDLYGSNHDAATWADP 321
Query: 89 GRFDPSR 95
F P R
Sbjct: 322 QEFRPER 328
Score = 28.1 bits (61), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 11/38 (28%), Positives = 19/38 (50%)
Query: 144 QLEYLECVIKETLRLFPAAPLIGRHIDEDFILDGLTIP 181
Q +Y E ++E R +P P + +DF +G+ P
Sbjct: 262 QPDYAELFVQEVRRFYPFFPAVVARASQDFEWEGMAFP 299
>pdb|3VM4|A Chain A, Cytochrome P450sp Alpha (Cyp152b1) In Complex With
(R)-Ibuprophen
Length = 407
Score = 44.7 bits (104), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 19/67 (28%), Positives = 32/67 (47%)
Query: 29 QLEYLECVIKETLRLFPAAPLIGRHIDEDFILDGLTIPAGVTVLISIYALHRDPKYYPSP 88
Q +Y E ++E R +P P + +DF +G+ P G V++ +Y + D + P
Sbjct: 262 QPDYAELFVQEVRRFYPFFPAVVARASQDFEWEGMAFPEGRQVVLDLYGSNHDAATWADP 321
Query: 89 GRFDPSR 95
F P R
Sbjct: 322 QEFRPER 328
Score = 28.1 bits (61), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 11/38 (28%), Positives = 19/38 (50%)
Query: 144 QLEYLECVIKETLRLFPAAPLIGRHIDEDFILDGLTIP 181
Q +Y E ++E R +P P + +DF +G+ P
Sbjct: 262 QPDYAELFVQEVRRFYPFFPAVVARASQDFEWEGMAFP 299
>pdb|3AWQ|A Chain A, Cytochrome P450sp Alpha (Cyp152b1) Mutant L78f
Length = 415
Score = 44.7 bits (104), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 19/67 (28%), Positives = 32/67 (47%)
Query: 29 QLEYLECVIKETLRLFPAAPLIGRHIDEDFILDGLTIPAGVTVLISIYALHRDPKYYPSP 88
Q +Y E ++E R +P P + +DF +G+ P G V++ +Y + D + P
Sbjct: 270 QPDYAELFVQEVRRFYPFFPAVVARASQDFEWEGMAFPEGRQVVLDLYGSNHDAATWADP 329
Query: 89 GRFDPSR 95
F P R
Sbjct: 330 QEFRPER 336
Score = 28.5 bits (62), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 11/38 (28%), Positives = 19/38 (50%)
Query: 144 QLEYLECVIKETLRLFPAAPLIGRHIDEDFILDGLTIP 181
Q +Y E ++E R +P P + +DF +G+ P
Sbjct: 270 QPDYAELFVQEVRRFYPFFPAVVARASQDFEWEGMAFP 307
>pdb|2F9Q|A Chain A, Crystal Structure Of Human Cytochrome P450 2d6
pdb|2F9Q|B Chain B, Crystal Structure Of Human Cytochrome P450 2d6
pdb|2F9Q|C Chain C, Crystal Structure Of Human Cytochrome P450 2d6
pdb|2F9Q|D Chain D, Crystal Structure Of Human Cytochrome P450 2d6
Length = 479
Score = 44.7 bits (104), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 28/97 (28%), Positives = 44/97 (45%), Gaps = 3/97 (3%)
Query: 2 VYPSVLEEIDRVLGRNTTHCPSYEDLCQLEYLECVIKETLRLFPAAPLIGRHI-DEDFIL 60
V V +EID V+G+ P D + Y VI E R PL H+ D +
Sbjct: 305 VQRRVQQEIDDVIGQ--VRRPEMGDQAHMPYTTAVIHEVQRFGDIVPLGMTHMTSRDIEV 362
Query: 61 DGLTIPAGVTVLISIYALHRDPKYYPSPGRFDPSRWM 97
G IP G T++ ++ ++ +D + P RF P ++
Sbjct: 363 QGFRIPKGTTLITNLSSVLKDEAVWEKPFRFHPEHFL 399
>pdb|3AWM|A Chain A, Cytochrome P450sp Alpha (Cyp152b1) Wild-Type With Palmitic
Acid
Length = 415
Score = 44.7 bits (104), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 19/67 (28%), Positives = 32/67 (47%)
Query: 29 QLEYLECVIKETLRLFPAAPLIGRHIDEDFILDGLTIPAGVTVLISIYALHRDPKYYPSP 88
Q +Y E ++E R +P P + +DF +G+ P G V++ +Y + D + P
Sbjct: 270 QPDYAELFVQEVRRFYPFFPAVVARASQDFEWEGMAFPEGRQVVLDLYGSNHDAATWADP 329
Query: 89 GRFDPSR 95
F P R
Sbjct: 330 QEFRPER 336
Score = 28.1 bits (61), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 11/38 (28%), Positives = 19/38 (50%)
Query: 144 QLEYLECVIKETLRLFPAAPLIGRHIDEDFILDGLTIP 181
Q +Y E ++E R +P P + +DF +G+ P
Sbjct: 270 QPDYAELFVQEVRRFYPFFPAVVARASQDFEWEGMAFP 307
>pdb|3QM4|A Chain A, Human Cytochrome P450 (Cyp) 2d6 - Prinomastat Complex
pdb|3QM4|B Chain B, Human Cytochrome P450 (Cyp) 2d6 - Prinomastat Complex
pdb|3TBG|A Chain A, Human Cytochrome P450 2d6 With Two Thioridazines Bound In
Active Site
pdb|3TBG|B Chain B, Human Cytochrome P450 2d6 With Two Thioridazines Bound In
Active Site
pdb|3TBG|C Chain C, Human Cytochrome P450 2d6 With Two Thioridazines Bound In
Active Site
pdb|3TBG|D Chain D, Human Cytochrome P450 2d6 With Two Thioridazines Bound In
Active Site
pdb|3TDA|A Chain A, Competitive Replacement Of Thioridazine By Prinomastat In
Crystals Of Cytochrome P450 2d6
pdb|3TDA|B Chain B, Competitive Replacement Of Thioridazine By Prinomastat In
Crystals Of Cytochrome P450 2d6
pdb|3TDA|C Chain C, Competitive Replacement Of Thioridazine By Prinomastat In
Crystals Of Cytochrome P450 2d6
pdb|3TDA|D Chain D, Competitive Replacement Of Thioridazine By Prinomastat In
Crystals Of Cytochrome P450 2d6
Length = 479
Score = 44.3 bits (103), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 28/97 (28%), Positives = 44/97 (45%), Gaps = 3/97 (3%)
Query: 2 VYPSVLEEIDRVLGRNTTHCPSYEDLCQLEYLECVIKETLRLFPAAPLIGRHI-DEDFIL 60
V V +EID V+G+ P D + Y VI E R PL H+ D +
Sbjct: 305 VQRRVQQEIDDVIGQ--VRRPEMGDQAHMPYTTAVIHEVQRFGDIVPLGVTHMTSRDIEV 362
Query: 61 DGLTIPAGVTVLISIYALHRDPKYYPSPGRFDPSRWM 97
G IP G T++ ++ ++ +D + P RF P ++
Sbjct: 363 QGFRIPKGTTLITNLSSVLKDEAVWEKPFRFHPEHFL 399
>pdb|1PO5|A Chain A, Structure Of Mammalian Cytochrome P450 2b4
Length = 476
Score = 44.3 bits (103), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 29/102 (28%), Positives = 49/102 (48%), Gaps = 7/102 (6%)
Query: 1 MVYPSVLE----EIDRVLGRNTTHCPSYEDLCQLEYLECVIKETLRLFPAAPLIGRH-ID 55
+ YP V E EI++V+G + P+ +D ++ Y + VI E RL P H +
Sbjct: 296 LKYPHVTERVQKEIEQVIG--SHRPPALDDRAKMPYTDAVIHEIQRLGDLIPFGVPHTVT 353
Query: 56 EDFILDGLTIPAGVTVLISIYALHRDPKYYPSPGRFDPSRWM 97
+D G IP V + + DP+Y+ +P F+P ++
Sbjct: 354 KDTQFRGYVIPKNTEVFPVLSSALHDPRYFETPNTFNPGHFL 395
>pdb|3TK3|A Chain A, Cytochrome P450 2b4 Mutant L437a In Complex With
4-(4-Chlorophenyl) Imidazole
pdb|3TK3|B Chain B, Cytochrome P450 2b4 Mutant L437a In Complex With
4-(4-Chlorophenyl) Imidazole
pdb|3TK3|C Chain C, Cytochrome P450 2b4 Mutant L437a In Complex With
4-(4-Chlorophenyl) Imidazole
pdb|3TK3|D Chain D, Cytochrome P450 2b4 Mutant L437a In Complex With
4-(4-Chlorophenyl) Imidazole
Length = 476
Score = 44.3 bits (103), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 29/102 (28%), Positives = 49/102 (48%), Gaps = 7/102 (6%)
Query: 1 MVYPSVLE----EIDRVLGRNTTHCPSYEDLCQLEYLECVIKETLRLFPAAPLIGRH-ID 55
+ YP V E EI++V+G + P+ +D ++ Y + VI E RL P H +
Sbjct: 296 LKYPHVTERVQKEIEQVIG--SHRPPALDDRAKMPYTDAVIHEIQRLGDLIPFGVPHTVT 353
Query: 56 EDFILDGLTIPAGVTVLISIYALHRDPKYYPSPGRFDPSRWM 97
+D G IP V + + DP+Y+ +P F+P ++
Sbjct: 354 KDTQFRGYVIPKNTEVFPVLSSALHDPRYFETPNTFNPGHFL 395
>pdb|1SUO|A Chain A, Structure Of Mammalian Cytochrome P450 2b4 With Bound
4-(4- Chlorophenyl)imidazole
pdb|2BDM|A Chain A, Structure Of Cytochrome P450 2b4 With Bound Bifonazole
pdb|3G5N|A Chain A, Triple Ligand Occupancy Crystal Structure Of Cytochrome
P450 Complex With The Inhibitor
1-Biphenyl-4-Methyl-1h-Imidazole
pdb|3G5N|B Chain B, Triple Ligand Occupancy Crystal Structure Of Cytochrome
P450 Complex With The Inhibitor
1-Biphenyl-4-Methyl-1h-Imidazole
pdb|3G5N|C Chain C, Triple Ligand Occupancy Crystal Structure Of Cytochrome
P450 Complex With The Inhibitor
1-Biphenyl-4-Methyl-1h-Imidazole
pdb|3G5N|D Chain D, Triple Ligand Occupancy Crystal Structure Of Cytochrome
P450 Complex With The Inhibitor
1-Biphenyl-4-Methyl-1h-Imidazole
pdb|3G93|A Chain A, Single Ligand Occupancy Crystal Structure Of Cytochrome
P450 Complex With The Inhibitor
1-Biphenyl-4-Methyl-1h-Imidazole
pdb|3G93|B Chain B, Single Ligand Occupancy Crystal Structure Of Cytochrome
P450 Complex With The Inhibitor
1-Biphenyl-4-Methyl-1h-Imidazole
pdb|3G93|C Chain C, Single Ligand Occupancy Crystal Structure Of Cytochrome
P450 Complex With The Inhibitor
1-Biphenyl-4-Methyl-1h-Imidazole
pdb|3G93|D Chain D, Single Ligand Occupancy Crystal Structure Of Cytochrome
P450 Complex With The Inhibitor
1-Biphenyl-4-Methyl-1h-Imidazole
pdb|3KW4|A Chain A, Crystal Structure Of Cytochrome 2b4 In Complex With The
Anti-Platelet Drug Ticlopidine
pdb|3ME6|A Chain A, Crystal Structure Of Cytochrome 2b4 In Complex With The
Anti-Platelet Drug Clopidogrel
pdb|3ME6|B Chain B, Crystal Structure Of Cytochrome 2b4 In Complex With The
Anti-Platelet Drug Clopidogrel
pdb|3ME6|C Chain C, Crystal Structure Of Cytochrome 2b4 In Complex With The
Anti-Platelet Drug Clopidogrel
pdb|3ME6|D Chain D, Crystal Structure Of Cytochrome 2b4 In Complex With The
Anti-Platelet Drug Clopidogrel
pdb|3MVR|A Chain A, Crystal Structure Of Cytochrome P450 2b4-H226y In A Closed
Conformation
pdb|3MVR|B Chain B, Crystal Structure Of Cytochrome P450 2b4-H226y In A Closed
Conformation
pdb|3R1A|A Chain A, Closed Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3R1A|B Chain B, Closed Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3R1A|C Chain C, Closed Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3R1A|D Chain D, Closed Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3R1A|E Chain E, Closed Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3R1A|F Chain F, Closed Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3R1A|G Chain G, Closed Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3R1A|H Chain H, Closed Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3R1B|A Chain A, Open Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3R1B|B Chain B, Open Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3R1B|C Chain C, Open Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3R1B|D Chain D, Open Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3TMZ|A Chain A, Crystal Structure Of P450 2b4(H226y) In Complex With
Amlodipine
pdb|3UAS|A Chain A, Cytochrome P450 2b4 Covalently Bound To The
Mechanism-based Inactivator 9-ethynylphenanthrene
Length = 476
Score = 44.3 bits (103), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 29/102 (28%), Positives = 49/102 (48%), Gaps = 7/102 (6%)
Query: 1 MVYPSVLE----EIDRVLGRNTTHCPSYEDLCQLEYLECVIKETLRLFPAAPLIGRH-ID 55
+ YP V E EI++V+G + P+ +D ++ Y + VI E RL P H +
Sbjct: 296 LKYPHVTERVQKEIEQVIG--SHRPPALDDRAKMPYTDAVIHEIQRLGDLIPFGVPHTVT 353
Query: 56 EDFILDGLTIPAGVTVLISIYALHRDPKYYPSPGRFDPSRWM 97
+D G IP V + + DP+Y+ +P F+P ++
Sbjct: 354 KDTQFRGYVIPKNTEVFPVLSSALHDPRYFETPNTFNPGHFL 395
>pdb|2Q6N|A Chain A, Structure Of Cytochrome P450 2b4 With Bound 1-(4-
Cholorophenyl)imidazole
pdb|2Q6N|B Chain B, Structure Of Cytochrome P450 2b4 With Bound 1-(4-
Cholorophenyl)imidazole
pdb|2Q6N|C Chain C, Structure Of Cytochrome P450 2b4 With Bound 1-(4-
Cholorophenyl)imidazole
pdb|2Q6N|D Chain D, Structure Of Cytochrome P450 2b4 With Bound 1-(4-
Cholorophenyl)imidazole
pdb|2Q6N|E Chain E, Structure Of Cytochrome P450 2b4 With Bound 1-(4-
Cholorophenyl)imidazole
pdb|2Q6N|F Chain F, Structure Of Cytochrome P450 2b4 With Bound 1-(4-
Cholorophenyl)imidazole
pdb|2Q6N|G Chain G, Structure Of Cytochrome P450 2b4 With Bound 1-(4-
Cholorophenyl)imidazole
Length = 478
Score = 44.3 bits (103), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 29/102 (28%), Positives = 49/102 (48%), Gaps = 7/102 (6%)
Query: 1 MVYPSVLE----EIDRVLGRNTTHCPSYEDLCQLEYLECVIKETLRLFPAAPLIGRH-ID 55
+ YP V E EI++V+G + P+ +D ++ Y + VI E RL P H +
Sbjct: 296 LKYPHVTERVQKEIEQVIG--SHRPPALDDRAKMPYTDAVIHEIQRLGDLIPFGVPHTVT 353
Query: 56 EDFILDGLTIPAGVTVLISIYALHRDPKYYPSPGRFDPSRWM 97
+D G IP V + + DP+Y+ +P F+P ++
Sbjct: 354 KDTQFRGYVIPKNTEVFPVLSSALHDPRYFETPNTFNPGHFL 395
>pdb|4H1N|A Chain A, Crystal Structure Of P450 2b4 F297a Mutant In Complex With
Anti- Platelet Drug Clopidogrel
Length = 479
Score = 44.3 bits (103), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 29/102 (28%), Positives = 49/102 (48%), Gaps = 7/102 (6%)
Query: 1 MVYPSVLE----EIDRVLGRNTTHCPSYEDLCQLEYLECVIKETLRLFPAAPLIGRH-ID 55
+ YP V E EI++V+G + P+ +D ++ Y + VI E RL P H +
Sbjct: 296 LKYPHVTERVQKEIEQVIG--SHRPPALDDRAKMPYTDAVIHEIQRLGDLIPFGVPHTVT 353
Query: 56 EDFILDGLTIPAGVTVLISIYALHRDPKYYPSPGRFDPSRWM 97
+D G IP V + + DP+Y+ +P F+P ++
Sbjct: 354 KDTQFRGYVIPKNTEVFPVLSSALHDPRYFETPNTFNPGHFL 395
>pdb|3PM0|A Chain A, Structural Characterization Of The Complex Between Alpha-
Naphthoflavone And Human Cytochrome P450 1b1 (Cyp1b1)
Length = 507
Score = 43.9 bits (102), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 27/97 (27%), Positives = 48/97 (49%), Gaps = 3/97 (3%)
Query: 2 VYPSVLEEIDRVLGRNTTHCPSYEDLCQLEYLECVIKETLRLFPAAPLIGRH-IDEDFIL 60
V V E+D+V+GR+ P D L Y+ + E +R P+ H + +
Sbjct: 312 VQTRVQAELDQVVGRD--RLPCMGDQPNLPYVLAFLYEAMRFSSFVPVTIPHATTANTSV 369
Query: 61 DGLTIPAGVTVLISIYALHRDPKYYPSPGRFDPSRWM 97
G IP V ++ ++++ DP +P+P FDP+R++
Sbjct: 370 LGYHIPKDTVVFVNQWSVNHDPLKWPNPENFDPARFL 406
>pdb|3QZ1|A Chain A, Crystal Structure Of Bovine Steroid Of 21-Hydroxylase
(P450c21)
pdb|3QZ1|B Chain B, Crystal Structure Of Bovine Steroid Of 21-Hydroxylase
(P450c21)
pdb|3QZ1|C Chain C, Crystal Structure Of Bovine Steroid Of 21-Hydroxylase
(P450c21)
pdb|3QZ1|D Chain D, Crystal Structure Of Bovine Steroid Of 21-Hydroxylase
(P450c21)
Length = 496
Score = 43.9 bits (102), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 31/93 (33%), Positives = 44/93 (47%), Gaps = 4/93 (4%)
Query: 8 EEIDRVLGRNTTHCP--SYEDLCQLEYLECVIKETLRLFPAAPLIGRH-IDEDFILDGLT 64
EE+DR LG + C +Y+D +L L I E LRL P PL H + G
Sbjct: 318 EELDRELGPGAS-CSRVTYKDRARLPLLNATIAEVLRLRPVVPLALPHRTTRPSSIFGYD 376
Query: 65 IPAGVTVLISIYALHRDPKYYPSPGRFDPSRWM 97
IP G+ V+ ++ H D + P F P R++
Sbjct: 377 IPEGMVVIPNLQGAHLDETVWEQPHEFRPDRFL 409
Score = 30.4 bits (67), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 19/44 (43%), Positives = 24/44 (54%), Gaps = 3/44 (6%)
Query: 123 EEIDRVLGRNTTHCP--SYEDLCQLEYLECVIKETLRLFPAAPL 164
EE+DR LG + C +Y+D +L L I E LRL P PL
Sbjct: 318 EELDRELGPGAS-CSRVTYKDRARLPLLNATIAEVLRLRPVVPL 360
>pdb|3P3L|A Chain A, Crystal Structure Of The Cytochrome P450 Monooxygenase
Aurh (Wildtype) From Streptomyces Thioluteus
pdb|3P3L|B Chain B, Crystal Structure Of The Cytochrome P450 Monooxygenase
Aurh (Wildtype) From Streptomyces Thioluteus
Length = 406
Score = 43.5 bits (101), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 21/58 (36%), Positives = 31/58 (53%), Gaps = 1/58 (1%)
Query: 36 VIKETLRLFPAAPLIG-RHIDEDFILDGLTIPAGVTVLISIYALHRDPKYYPSPGRFD 92
++E LR P P+ R EDF ++G+ IP G V + + HRDP+ + RFD
Sbjct: 279 AVEEVLRWSPTLPVTATRVAAEDFEVNGVRIPTGTPVFMCAHVAHRDPRVFADADRFD 336
>pdb|3P3O|A Chain A, Crystal Structure Of The Cytochrome P450 Monooxygenase
Aurh (Ntermii) From Streptomyces Thioluteus
pdb|3P3X|A Chain A, Crystal Structure Of The Cytochrome P450 Monooxygenase
Aurh (Nterm- Aurh-I) From Streptomyces Thioluteus
pdb|3P3X|B Chain B, Crystal Structure Of The Cytochrome P450 Monooxygenase
Aurh (Nterm- Aurh-I) From Streptomyces Thioluteus
pdb|3P3Z|A Chain A, Crystal Structure Of The Cytochrome P450 Monooxygenase
Aurh From Streptomyces Thioluteus In Complex With
Ancymidol
Length = 416
Score = 43.1 bits (100), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 21/58 (36%), Positives = 31/58 (53%), Gaps = 1/58 (1%)
Query: 36 VIKETLRLFPAAPLIG-RHIDEDFILDGLTIPAGVTVLISIYALHRDPKYYPSPGRFD 92
++E LR P P+ R EDF ++G+ IP G V + + HRDP+ + RFD
Sbjct: 289 AVEEVLRWSPTLPVTATRVAAEDFEVNGVRIPTGTPVFMCAHVAHRDPRVFADADRFD 346
>pdb|1JIP|A Chain A, P450eryf(A245s)KETOCONAZOLE
Length = 403
Score = 43.1 bits (100), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 24/66 (36%), Positives = 34/66 (51%)
Query: 33 LECVIKETLRLFPAAPLIGRHIDEDFILDGLTIPAGVTVLISIYALHRDPKYYPSPGRFD 92
L ++E LR R E+ + G+ IP TVL++ A +RDPK +P P RFD
Sbjct: 273 LPNAVEEILRYIAPPETTTRFAAEEVEIGGVAIPQYSTVLVANGAANRDPKQFPDPHRFD 332
Query: 93 PSRWMR 98
+R R
Sbjct: 333 VTRDTR 338
>pdb|1JIO|A Chain A, P450eryf/6deb
Length = 403
Score = 42.7 bits (99), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 24/66 (36%), Positives = 34/66 (51%)
Query: 33 LECVIKETLRLFPAAPLIGRHIDEDFILDGLTIPAGVTVLISIYALHRDPKYYPSPGRFD 92
L ++E LR R E+ + G+ IP TVL++ A +RDPK +P P RFD
Sbjct: 273 LPNAVEEILRYIAPPETTTRFAAEEVEIGGVAIPQYSTVLVANGAANRDPKQFPDPHRFD 332
Query: 93 PSRWMR 98
+R R
Sbjct: 333 VTRDTR 338
>pdb|1Z8O|A Chain A, Ferrous Dioxygen Complex Of The Wild-Type Cytochrome
P450eryf
Length = 404
Score = 42.7 bits (99), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 24/66 (36%), Positives = 34/66 (51%)
Query: 33 LECVIKETLRLFPAAPLIGRHIDEDFILDGLTIPAGVTVLISIYALHRDPKYYPSPGRFD 92
L ++E LR R E+ + G+ IP TVL++ A +RDPK +P P RFD
Sbjct: 274 LPNAVEEILRYIAPPETTTRFAAEEVEIGGVAIPQYSTVLVANGAANRDPKQFPDPHRFD 333
Query: 93 PSRWMR 98
+R R
Sbjct: 334 VTRDTR 339
>pdb|1Z8Q|A Chain A, Ferrous Dioxygen Complex Of The A245t Cytochrome P450eryf
Length = 404
Score = 42.7 bits (99), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 24/66 (36%), Positives = 34/66 (51%)
Query: 33 LECVIKETLRLFPAAPLIGRHIDEDFILDGLTIPAGVTVLISIYALHRDPKYYPSPGRFD 92
L ++E LR R E+ + G+ IP TVL++ A +RDPK +P P RFD
Sbjct: 274 LPNAVEEILRYIAPPETTTRFAAEEVEIGGVAIPQYSTVLVANGAANRDPKQFPDPHRFD 333
Query: 93 PSRWMR 98
+R R
Sbjct: 334 VTRDTR 339
>pdb|1Z8P|A Chain A, Ferrous Dioxygen Complex Of The A245s Cytochrome P450eryf
Length = 404
Score = 42.7 bits (99), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 24/66 (36%), Positives = 34/66 (51%)
Query: 33 LECVIKETLRLFPAAPLIGRHIDEDFILDGLTIPAGVTVLISIYALHRDPKYYPSPGRFD 92
L ++E LR R E+ + G+ IP TVL++ A +RDPK +P P RFD
Sbjct: 274 LPNAVEEILRYIAPPETTTRFAAEEVEIGGVAIPQYSTVLVANGAANRDPKQFPDPHRFD 333
Query: 93 PSRWMR 98
+R R
Sbjct: 334 VTRDTR 339
>pdb|2VZ7|A Chain A, Crystal Structure Of The Yc-17-Bound Pikc D50n Mutant
pdb|2VZ7|B Chain B, Crystal Structure Of The Yc-17-Bound Pikc D50n Mutant
pdb|2VZM|A Chain A, Crystal Structure Of The Narbomycin-Bound Pikc D50n Mutant
pdb|2VZM|B Chain B, Crystal Structure Of The Narbomycin-Bound Pikc D50n Mutant
Length = 436
Score = 41.6 bits (96), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 26/69 (37%), Positives = 34/69 (49%), Gaps = 1/69 (1%)
Query: 28 CQLEYLECVIKETLRL-FPAAPLIGRHIDEDFILDGLTIPAGVTVLISIYALHRDPKYYP 86
+ L+ ++E LR P R E LDG IPAG TVL+ + HR P+ +P
Sbjct: 291 ADMTLLDGAVEEMLRYEGPVESATYRFPVEPVDLDGTVIPAGDTVLVVLADAHRTPERFP 350
Query: 87 SPGRFDPSR 95
P RFD R
Sbjct: 351 DPHRFDIRR 359
>pdb|2WHW|A Chain A, Selective Oxidation Of Carbolide C-H Bonds By Engineered
Macrolide P450 Monooxygenase
pdb|2WHW|B Chain B, Selective Oxidation Of Carbolide C-H Bonds By Engineered
Macrolide P450 Monooxygenase
pdb|2WI9|A Chain A, Selective Oxidation Of Carbolide C-H Bonds By Engineered
Macrolide P450 Monooxygenase
pdb|2WI9|B Chain B, Selective Oxidation Of Carbolide C-H Bonds By Engineered
Macrolide P450 Monooxygenase
Length = 436
Score = 41.6 bits (96), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 26/69 (37%), Positives = 34/69 (49%), Gaps = 1/69 (1%)
Query: 28 CQLEYLECVIKETLRL-FPAAPLIGRHIDEDFILDGLTIPAGVTVLISIYALHRDPKYYP 86
+ L+ ++E LR P R E LDG IPAG TVL+ + HR P+ +P
Sbjct: 291 ADMTLLDGAVEEMLRYEGPVESATYRFPVEPVDLDGTVIPAGDTVLVVLADAHRTPERFP 350
Query: 87 SPGRFDPSR 95
P RFD R
Sbjct: 351 DPHRFDIRR 359
>pdb|2BVJ|A Chain A, Ligand-Free Structure Of Cytochrome P450 Pikc (Cyp107l1)
pdb|2BVJ|B Chain B, Ligand-Free Structure Of Cytochrome P450 Pikc (Cyp107l1)
pdb|2C6H|A Chain A, Crystal Structure Of Yc-17-Bound Cytochrome P450 Pikc
(Cyp107l1)
pdb|2C6H|B Chain B, Crystal Structure Of Yc-17-Bound Cytochrome P450 Pikc
(Cyp107l1)
pdb|2C7X|A Chain A, Crystal Structure Of Narbomycin-Bound Cytochrome P450 Pikc
(Cyp107l1)
pdb|2CA0|A Chain A, Crystal Structure Of Yc-17-Bound Cytochrome P450 Pikc
(Cyp107l1)
pdb|2CA0|B Chain B, Crystal Structure Of Yc-17-Bound Cytochrome P450 Pikc
(Cyp107l1)
pdb|2CD8|A Chain A, Crystal Structure Of Yc-17-Bound Cytochrome P450 Pikc
(Cyp107l1)
pdb|2CD8|B Chain B, Crystal Structure Of Yc-17-Bound Cytochrome P450 Pikc
(Cyp107l1)
Length = 436
Score = 41.6 bits (96), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 26/69 (37%), Positives = 34/69 (49%), Gaps = 1/69 (1%)
Query: 28 CQLEYLECVIKETLRL-FPAAPLIGRHIDEDFILDGLTIPAGVTVLISIYALHRDPKYYP 86
+ L+ ++E LR P R E LDG IPAG TVL+ + HR P+ +P
Sbjct: 291 ADMTLLDGAVEEMLRYEGPVESATYRFPVEPVDLDGTVIPAGDTVLVVLADAHRTPERFP 350
Query: 87 SPGRFDPSR 95
P RFD R
Sbjct: 351 DPHRFDIRR 359
>pdb|1EGY|A Chain A, Cytochrome P450eryf With 9-Aminophenanthrene Bound
pdb|1EUP|A Chain A, X-Ray Crystal Structure Of Cytochrome P450eryf With
Androstendione Bound
pdb|1JIN|A Chain A, P450eryfKETOCONAZOLE
pdb|1OXA|A Chain A, Cytochrome P450 (Donor:o2 Oxidoreductase)
Length = 403
Score = 40.8 bits (94), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 23/66 (34%), Positives = 33/66 (50%)
Query: 33 LECVIKETLRLFPAAPLIGRHIDEDFILDGLTIPAGVTVLISIYALHRDPKYYPSPGRFD 92
L ++E LR R E+ + G+ IP TVL++ A +RDP +P P RFD
Sbjct: 273 LPNAVEEILRYIAPPETTTRFAAEEVEIGGVAIPQYSTVLVANGAANRDPSQFPDPHRFD 332
Query: 93 PSRWMR 98
+R R
Sbjct: 333 VTRDTR 338
>pdb|3A4G|A Chain A, Structure Of Cytochrome P450 Vdh From Pseudonocardia
Autotrophica (Trigonal Crystal Form)
pdb|3A4H|A Chain A, Structure Of Cytochrome P450 Vdh From Pseudonocardia
Autotrophica (Orthorhombic Crystal Form)
Length = 411
Score = 40.8 bits (94), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 22/64 (34%), Positives = 33/64 (51%), Gaps = 1/64 (1%)
Query: 33 LECVIKETLRL-FPAAPLIGRHIDEDFILDGLTIPAGVTVLISIYALHRDPKYYPSPGRF 91
+ ++E LR P + R ED G+TIPAG V++ + A +RD + P P R
Sbjct: 269 ISSAVEEFLRFDSPVSQAPIRFTAEDVTYSGVTIPAGEMVMLGLAAANRDADWMPEPDRL 328
Query: 92 DPSR 95
D +R
Sbjct: 329 DITR 332
>pdb|3A4Z|A Chain A, Structure Of Cytochrome P450 Vdh Mutant (Vdh-K1) Obtained
By Directed Evolution
pdb|3A4Z|B Chain B, Structure Of Cytochrome P450 Vdh Mutant (Vdh-K1) Obtained
By Directed Evolution
pdb|3A4Z|C Chain C, Structure Of Cytochrome P450 Vdh Mutant (Vdh-K1) Obtained
By Directed Evolution
pdb|3A4Z|D Chain D, Structure Of Cytochrome P450 Vdh Mutant (Vdh-K1) Obtained
By Directed Evolution
pdb|3A4Z|E Chain E, Structure Of Cytochrome P450 Vdh Mutant (Vdh-K1) Obtained
By Directed Evolution
pdb|3A50|A Chain A, Structure Of Cytochrome P450 Vdh Mutant (Vdh-K1) Obtained
By Directed Evolution With Bound Vitamin D3
pdb|3A50|B Chain B, Structure Of Cytochrome P450 Vdh Mutant (Vdh-K1) Obtained
By Directed Evolution With Bound Vitamin D3
pdb|3A50|C Chain C, Structure Of Cytochrome P450 Vdh Mutant (Vdh-K1) Obtained
By Directed Evolution With Bound Vitamin D3
pdb|3A50|D Chain D, Structure Of Cytochrome P450 Vdh Mutant (Vdh-K1) Obtained
By Directed Evolution With Bound Vitamin D3
pdb|3A50|E Chain E, Structure Of Cytochrome P450 Vdh Mutant (Vdh-K1) Obtained
By Directed Evolution With Bound Vitamin D3
pdb|3A51|A Chain A, Structure Of Cytochrome P450 Vdh Mutant (Vdh-K1) Obtained
By Directed Evolution With Bound 25-Hydroxyvitamin D3
pdb|3A51|B Chain B, Structure Of Cytochrome P450 Vdh Mutant (Vdh-K1) Obtained
By Directed Evolution With Bound 25-Hydroxyvitamin D3
pdb|3A51|C Chain C, Structure Of Cytochrome P450 Vdh Mutant (Vdh-K1) Obtained
By Directed Evolution With Bound 25-Hydroxyvitamin D3
pdb|3A51|D Chain D, Structure Of Cytochrome P450 Vdh Mutant (Vdh-K1) Obtained
By Directed Evolution With Bound 25-Hydroxyvitamin D3
pdb|3A51|E Chain E, Structure Of Cytochrome P450 Vdh Mutant (Vdh-K1) Obtained
By Directed Evolution With Bound 25-Hydroxyvitamin D3
Length = 411
Score = 40.4 bits (93), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 22/64 (34%), Positives = 33/64 (51%), Gaps = 1/64 (1%)
Query: 33 LECVIKETLRL-FPAAPLIGRHIDEDFILDGLTIPAGVTVLISIYALHRDPKYYPSPGRF 91
+ ++E LR P + R ED G+TIPAG V++ + A +RD + P P R
Sbjct: 269 ISSAVEEFLRFDSPVSQAPIRFTAEDVTYSGVTIPAGEMVMLGLAAANRDADWMPEPDRL 328
Query: 92 DPSR 95
D +R
Sbjct: 329 DITR 332
>pdb|2JJN|A Chain A, Structure Of Closed Cytochrome P450 Eryk
pdb|2JJO|A Chain A, Structure Of Cytochrome P450 Eryk In Complex With Its
Natural Substrate Erd
pdb|2JJP|A Chain A, Structure Of Cytochrome P450 Eryk In Complex With
Inhibitor Ketoconazole (Kc)
pdb|2XFH|A Chain A, Structure Of Cytochrome P450 Eryk Cocrystallized With
Inhibitor Clotrimazole
Length = 411
Score = 40.0 bits (92), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 21/61 (34%), Positives = 32/61 (52%)
Query: 35 CVIKETLRLFPAAPLIGRHIDEDFILDGLTIPAGVTVLISIYALHRDPKYYPSPGRFDPS 94
+++E LR P P + R + + G+ IPA V V + + +RD + P RFDPS
Sbjct: 276 AIVEEVLRYRPPFPQMQRTTTKATEVAGVPIPADVMVNTWVLSANRDSDAHDDPDRFDPS 335
Query: 95 R 95
R
Sbjct: 336 R 336
>pdb|2VRV|A Chain A, Structure Of Histidine Tagged Cytochrome P450 Eryk In
Complex With Inhibitor Clotrimazole (Clt)
pdb|2WIO|A Chain A, Structure Of The Histidine Tagged, Open Cytochrome P450
Eryk From S. Erythraea
Length = 431
Score = 40.0 bits (92), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 21/61 (34%), Positives = 32/61 (52%)
Query: 35 CVIKETLRLFPAAPLIGRHIDEDFILDGLTIPAGVTVLISIYALHRDPKYYPSPGRFDPS 94
+++E LR P P + R + + G+ IPA V V + + +RD + P RFDPS
Sbjct: 296 AIVEEVLRYRPPFPQMQRTTTKATEVAGVPIPADVMVNTWVLSANRDSDAHDDPDRFDPS 355
Query: 95 R 95
R
Sbjct: 356 R 356
>pdb|3TNK|A Chain A, Crystal Structure Of Mutant I87r In Cyp158a2
pdb|3TNK|B Chain B, Crystal Structure Of Mutant I87r In Cyp158a2
Length = 407
Score = 38.1 bits (87), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 23/59 (38%), Positives = 30/59 (50%), Gaps = 2/59 (3%)
Query: 36 VIKETLRLFPAAPLIG--RHIDEDFILDGLTIPAGVTVLISIYALHRDPKYYPSPGRFD 92
I E LR P +G R ED + G+ I AG V +S A +RDP+ +P P R D
Sbjct: 277 AIDELLRWIPHRNAVGLSRIALEDVEIKGVRIRAGDAVYVSYLAANRDPEVFPDPDRID 335
>pdb|3TZO|A Chain A, The Role Of I87 Of Cyp158a2 In Oxidative Coupling Reaction
pdb|3TZO|B Chain B, The Role Of I87 Of Cyp158a2 In Oxidative Coupling Reaction
Length = 410
Score = 38.1 bits (87), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 23/59 (38%), Positives = 30/59 (50%), Gaps = 2/59 (3%)
Query: 36 VIKETLRLFPAAPLIG--RHIDEDFILDGLTIPAGVTVLISIYALHRDPKYYPSPGRFD 92
I E LR P +G R ED + G+ I AG V +S A +RDP+ +P P R D
Sbjct: 277 AIDELLRWIPHRNAVGLSRIALEDVEIKGVRIRAGDAVYVSYLAANRDPEVFPDPDRID 335
>pdb|2D0E|A Chain A, Substrate Assited In Oxygen Activation In Cytochrome P450
158a2
Length = 407
Score = 38.1 bits (87), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 24/62 (38%), Positives = 31/62 (50%), Gaps = 2/62 (3%)
Query: 36 VIKETLRLFPAAPLIG--RHIDEDFILDGLTIPAGVTVLISIYALHRDPKYYPSPGRFDP 93
I E LR P +G R ED + G+ I AG V +S A +RDP+ +P P R D
Sbjct: 277 AIDELLRWIPHRNAVGLSRIALEDVEIKGVRIRAGDAVYVSYLAANRDPEVFPDPDRIDF 336
Query: 94 SR 95
R
Sbjct: 337 ER 338
>pdb|1SE6|A Chain A, Crystal Structure Of Streptomyces Coelicolor A3(2)
Cyp158a2 From Antibiotic Biosynthetic Pathways
pdb|1SE6|B Chain B, Crystal Structure Of Streptomyces Coelicolor A3(2)
Cyp158a2 From Antibiotic Biosynthetic Pathways
Length = 406
Score = 38.1 bits (87), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 24/62 (38%), Positives = 31/62 (50%), Gaps = 2/62 (3%)
Query: 36 VIKETLRLFPAAPLIG--RHIDEDFILDGLTIPAGVTVLISIYALHRDPKYYPSPGRFDP 93
I E LR P +G R ED + G+ I AG V +S A +RDP+ +P P R D
Sbjct: 277 AIDELLRWIPHRNAVGLSRIALEDVEIKGVRIRAGDAVYVSYLAANRDPEVFPDPDRIDF 336
Query: 94 SR 95
R
Sbjct: 337 ER 338
>pdb|1S1F|A Chain A, Crystal Structure Of Streptomyces Coelicolor A3(2)
Cyp158a2 From Antibiotic Biosynthetic Pathways
Length = 406
Score = 38.1 bits (87), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 24/62 (38%), Positives = 31/62 (50%), Gaps = 2/62 (3%)
Query: 36 VIKETLRLFPAAPLIG--RHIDEDFILDGLTIPAGVTVLISIYALHRDPKYYPSPGRFDP 93
I E LR P +G R ED + G+ I AG V +S A +RDP+ +P P R D
Sbjct: 277 AIDELLRWIPHRNAVGLSRIALEDVEIKGVRIRAGDAVYVSYLAANRDPEVFPDPDRIDF 336
Query: 94 SR 95
R
Sbjct: 337 ER 338
>pdb|2D09|A Chain A, A Role For Active Site Water Molecules And Hydroxyl Groups
Of Substrate For Oxygen Activation In Cytochrome P450
158a2
Length = 407
Score = 38.1 bits (87), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 23/59 (38%), Positives = 30/59 (50%), Gaps = 2/59 (3%)
Query: 36 VIKETLRLFPAAPLIG--RHIDEDFILDGLTIPAGVTVLISIYALHRDPKYYPSPGRFD 92
I E LR P +G R ED + G+ I AG V +S A +RDP+ +P P R D
Sbjct: 277 AIDELLRWIPHRNAVGLSRIALEDVEIKGVRIRAGDAVYVSYLAANRDPEVFPDPDRID 335
>pdb|1T93|A Chain A, Evidence For Multiple Substrate Recognition And Molecular
Mechanism Of C-C Reaction By Cytochrome P450 Cyp158a2
From Streptomyces Coelicolor A3(2)
Length = 406
Score = 38.1 bits (87), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 23/59 (38%), Positives = 30/59 (50%), Gaps = 2/59 (3%)
Query: 36 VIKETLRLFPAAPLIG--RHIDEDFILDGLTIPAGVTVLISIYALHRDPKYYPSPGRFD 92
I E LR P +G R ED + G+ I AG V +S A +RDP+ +P P R D
Sbjct: 277 AIDELLRWIPHRNAVGLSRIALEDVEIKGVRIRAGDAVYVSYLAANRDPEVFPDPDRID 335
>pdb|3IBD|A Chain A, Crystal Structure Of A Cytochrome P450 2b6 Genetic Variant
In Complex With The Inhibitor
4-(4-Chlorophenyl)imidazole
pdb|3QOA|A Chain A, Crystal Structure Of A Human Cytochrome P450 2b6
(Y226hK262R) IN Complex With The Inhibitor
4-Benzylpyridine.
pdb|3QU8|A Chain A, Crystal Structure Of A Human Cytochrome P450 2b6
(Y226hK262R) IN Complex With The Inhibitor
4-(4-Nitrobenzyl)pyridine.
pdb|3QU8|B Chain B, Crystal Structure Of A Human Cytochrome P450 2b6
(Y226hK262R) IN Complex With The Inhibitor
4-(4-Nitrobenzyl)pyridine.
pdb|3QU8|C Chain C, Crystal Structure Of A Human Cytochrome P450 2b6
(Y226hK262R) IN Complex With The Inhibitor
4-(4-Nitrobenzyl)pyridine.
pdb|3QU8|D Chain D, Crystal Structure Of A Human Cytochrome P450 2b6
(Y226hK262R) IN Complex With The Inhibitor
4-(4-Nitrobenzyl)pyridine.
pdb|3QU8|E Chain E, Crystal Structure Of A Human Cytochrome P450 2b6
(Y226hK262R) IN Complex With The Inhibitor
4-(4-Nitrobenzyl)pyridine.
pdb|3QU8|F Chain F, Crystal Structure Of A Human Cytochrome P450 2b6
(Y226hK262R) IN Complex With The Inhibitor
4-(4-Nitrobenzyl)pyridine.
pdb|3UA5|A Chain A, Crystal Structure Of P450 2b6 (Y226hK262R) IN COMPLEX WITH
TWO Molecules Of Amlodipine
pdb|3UA5|B Chain B, Crystal Structure Of P450 2b6 (Y226hK262R) IN COMPLEX WITH
TWO Molecules Of Amlodipine
Length = 476
Score = 38.1 bits (87), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 32/113 (28%), Positives = 47/113 (41%), Gaps = 7/113 (6%)
Query: 1 MVYPSVLE----EIDRVLGRNTTHCPSYEDLCQLEYLECVIKETLRLFPAAPLIGRHI-D 55
+ YP V E EI++V+G + P D ++ Y E VI E R P+ HI
Sbjct: 296 LKYPHVAERVYREIEQVIGPHRP--PELHDRAKMPYTEAVIYEIQRFSDLLPMGVPHIVT 353
Query: 56 EDFILDGLTIPAGVTVLISIYALHRDPKYYPSPGRFDPSRWMRFRFRGDKTSA 108
+ G IP V + + DP Y+ P F+P ++ KT A
Sbjct: 354 QHTSFRGYIIPKDTEVFLILSTALHDPHYFEKPDAFNPDHFLDANGALKKTEA 406
>pdb|3ZSN|A Chain A, Structure Of The Mixed-Function P450 Mycg F286a Mutant In
Complex With Mycinamicin Iv
pdb|3ZSN|B Chain B, Structure Of The Mixed-Function P450 Mycg F286a Mutant In
Complex With Mycinamicin Iv
pdb|3ZSN|C Chain C, Structure Of The Mixed-Function P450 Mycg F286a Mutant In
Complex With Mycinamicin Iv
Length = 417
Score = 36.6 bits (83), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 26/70 (37%), Positives = 33/70 (47%), Gaps = 8/70 (11%)
Query: 31 EYLECVIKETLRLFP-----AAPLIGRHIDEDFILDGLTIPAGVTVLISIYALHRDPKYY 85
E + ++E R P AAP R+ ED L G+TI AG VL S A +RD +
Sbjct: 285 ELIPSAVEELTRWVPLGVGTAAP---RYAVEDVTLRGVTIRAGEPVLASTGAANRDQAQF 341
Query: 86 PSPGRFDPSR 95
P R D R
Sbjct: 342 PDADRIDVDR 351
>pdb|3SN5|A Chain A, Crystal Structure Of Human Cyp7a1 In Complex With
Cholest-4-En-3-One
pdb|3SN5|B Chain B, Crystal Structure Of Human Cyp7a1 In Complex With
Cholest-4-En-3-One
pdb|3V8D|A Chain A, Crystal Structure Of Human Cyp7a1 In Complex With
7-Ketocholesterol
pdb|3V8D|B Chain B, Crystal Structure Of Human Cyp7a1 In Complex With
7-Ketocholesterol
Length = 491
Score = 36.6 bits (83), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 29/81 (35%), Positives = 40/81 (49%), Gaps = 5/81 (6%)
Query: 21 CPSYEDLCQLEYLECVIKETLRLFPAAPLIGRHIDEDFIL---DG-LTIPAGVTVLISIY 76
C S +L L L+ +IKE+LRL +A L R EDF L DG I + +
Sbjct: 317 CLSQAELNDLPVLDSIIKESLRL-SSASLNIRTAKEDFTLHLEDGSYNIRKDDIIALYPQ 375
Query: 77 ALHRDPKYYPSPGRFDPSRWM 97
+H DP+ YP P F R++
Sbjct: 376 LMHLDPEIYPDPLTFKYDRYL 396
Score = 28.5 bits (62), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 18/40 (45%), Positives = 23/40 (57%), Gaps = 1/40 (2%)
Query: 136 CPSYEDLCQLEYLECVIKETLRLFPAAPLIGRHIDEDFIL 175
C S +L L L+ +IKE+LRL +A L R EDF L
Sbjct: 317 CLSQAELNDLPVLDSIIKESLRL-SSASLNIRTAKEDFTL 355
>pdb|3DAX|A Chain A, Crystal Structure Of Human Cyp7a1
pdb|3DAX|B Chain B, Crystal Structure Of Human Cyp7a1
Length = 491
Score = 36.6 bits (83), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 29/81 (35%), Positives = 40/81 (49%), Gaps = 5/81 (6%)
Query: 21 CPSYEDLCQLEYLECVIKETLRLFPAAPLIGRHIDEDFIL---DG-LTIPAGVTVLISIY 76
C S +L L L+ +IKE+LRL +A L R EDF L DG I + +
Sbjct: 317 CLSQAELNDLPVLDSIIKESLRL-SSASLNIRTAKEDFTLHLEDGSYNIRKDDIIALYPQ 375
Query: 77 ALHRDPKYYPSPGRFDPSRWM 97
+H DP+ YP P F R++
Sbjct: 376 LMHLDPEIYPDPLTFKYDRYL 396
Score = 28.5 bits (62), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 18/40 (45%), Positives = 23/40 (57%), Gaps = 1/40 (2%)
Query: 136 CPSYEDLCQLEYLECVIKETLRLFPAAPLIGRHIDEDFIL 175
C S +L L L+ +IKE+LRL +A L R EDF L
Sbjct: 317 CLSQAELNDLPVLDSIIKESLRL-SSASLNIRTAKEDFTL 355
>pdb|4AW3|A Chain A, Structure Of The Mixed-Function P450 Mycg F286v Mutant In
Complex With Mycinamicin V In P1 Space Group
pdb|4AW3|B Chain B, Structure Of The Mixed-Function P450 Mycg F286v Mutant In
Complex With Mycinamicin V In P1 Space Group
Length = 417
Score = 36.6 bits (83), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 23/67 (34%), Positives = 31/67 (46%), Gaps = 2/67 (2%)
Query: 31 EYLECVIKETLRLFP--AAPLIGRHIDEDFILDGLTIPAGVTVLISIYALHRDPKYYPSP 88
E + ++E R P + R+ ED L G+TI AG VL S A +RD +P
Sbjct: 285 ELIPSAVEELTRWVPLGVGTAVPRYAVEDVTLRGVTIRAGEPVLASTGAANRDQAQFPDA 344
Query: 89 GRFDPSR 95
R D R
Sbjct: 345 DRIDVDR 351
>pdb|1WIY|A Chain A, Crystal Structure Analysis Of A 6-Coordinated Cytochorome
P450 From Thermus Thermophilus Hb8
pdb|1WIY|B Chain B, Crystal Structure Analysis Of A 6-Coordinated Cytochorome
P450 From Thermus Thermophilus Hb8
Length = 389
Score = 36.2 bits (82), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 19/61 (31%), Positives = 33/61 (54%), Gaps = 2/61 (3%)
Query: 37 IKETLRLFPAAPLIGRHIDEDFILDGLTIPAGVTVLISIYALHRDPKYYPSPGRFDPSRW 96
+E LRL+P A ++ R ++ +L +P G T+++S Y R Y+P F P R+
Sbjct: 258 FQEALRLYPPAWILTRRLERPLLLGEDRLPQGTTLVLSPYVTQR--LYFPEGEAFQPERF 315
Query: 97 M 97
+
Sbjct: 316 L 316
>pdb|3MGX|A Chain A, Crystal Structure Of P450 Oxyd That Is Involved In The
Biosynthesis Of Vancomycin-Type Antibiotics
pdb|3MGX|B Chain B, Crystal Structure Of P450 Oxyd That Is Involved In The
Biosynthesis Of Vancomycin-Type Antibiotics
Length = 415
Score = 35.4 bits (80), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 19/63 (30%), Positives = 32/63 (50%)
Query: 33 LECVIKETLRLFPAAPLIGRHIDEDFILDGLTIPAGVTVLISIYALHRDPKYYPSPGRFD 92
++ V++E LR A + R D ++G +P+G V+ + A +RDP + P F
Sbjct: 287 VDTVVEEVLRWTSPAMHVLRVTTADVTINGRDLPSGTPVVAWLPAANRDPAEFDDPDTFL 346
Query: 93 PSR 95
P R
Sbjct: 347 PGR 349
>pdb|3TKT|A Chain A, Crystal Structure Of Cyp108d1 From Novosphingobium
Aromaticivorans Dsm12444
Length = 450
Score = 35.4 bits (80), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 19/63 (30%), Positives = 31/63 (49%)
Query: 33 LECVIKETLRLFPAAPLIGRHIDEDFILDGLTIPAGVTVLISIYALHRDPKYYPSPGRFD 92
L +++E +R R D L G I AG ++++ A + DP +P P +FD
Sbjct: 322 LPGIVEEAIRWTTPVQHFMRTAATDTELCGQKIAAGDWLMLNYVAANHDPAQFPEPRKFD 381
Query: 93 PSR 95
P+R
Sbjct: 382 PTR 384
>pdb|2Y46|A Chain A, Structure Of The Mixed-Function P450 Mycg In Complex With
Mycinamicin Iv In C 2 2 21 Space Group
pdb|2Y46|B Chain B, Structure Of The Mixed-Function P450 Mycg In Complex With
Mycinamicin Iv In C 2 2 21 Space Group
pdb|2Y46|C Chain C, Structure Of The Mixed-Function P450 Mycg In Complex With
Mycinamicin Iv In C 2 2 21 Space Group
pdb|2Y5N|A Chain A, Structure Of The Mixed-Function P450 Mycg In Complex With
Mycinamicin V In P21 Space Group
pdb|2Y5N|B Chain B, Structure Of The Mixed-Function P450 Mycg In Complex With
Mycinamicin V In P21 Space Group
pdb|2Y5Z|A Chain A, Mixed-Function P450 Mycg In Complex With Mycinamicin Iii
In C2221 Space Group
pdb|2Y5Z|B Chain B, Mixed-Function P450 Mycg In Complex With Mycinamicin Iii
In C2221 Space Group
pdb|2Y5Z|C Chain C, Mixed-Function P450 Mycg In Complex With Mycinamicin Iii
In C2221 Space Group
pdb|2Y98|A Chain A, Structure Of The Mixed-Function P450 Mycg In Complex With
Mycinamicin Iv In P21212 Space Group
pdb|2YGX|A Chain A, Structure Of The Mixed-Function P450 Mycg In P21 Space
Group
pdb|2YGX|B Chain B, Structure Of The Mixed-Function P450 Mycg In P21 Space
Group
pdb|2YGX|C Chain C, Structure Of The Mixed-Function P450 Mycg In P21 Space
Group
pdb|2YGX|D Chain D, Structure Of The Mixed-Function P450 Mycg In P21 Space
Group
pdb|2YCA|A Chain A, Mixed-Function P450 Mycg In Complex With Mycinamicin Iii
In P21212 Space Group
Length = 417
Score = 35.0 bits (79), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 23/67 (34%), Positives = 30/67 (44%), Gaps = 2/67 (2%)
Query: 31 EYLECVIKETLRLFP--AAPLIGRHIDEDFILDGLTIPAGVTVLISIYALHRDPKYYPSP 88
E + ++E R P R+ ED L G+TI AG VL S A +RD +P
Sbjct: 285 ELIPSAVEELTRWVPLGVGTAFPRYAVEDVTLRGVTIRAGEPVLASTGAANRDQAQFPDA 344
Query: 89 GRFDPSR 95
R D R
Sbjct: 345 DRIDVDR 351
>pdb|3EJB|B Chain B, Crystal Structure Of P450bioi In Complex With
Tetradecanoic Acid Ligated Acyl Carrier Protein
pdb|3EJB|D Chain D, Crystal Structure Of P450bioi In Complex With
Tetradecanoic Acid Ligated Acyl Carrier Protein
pdb|3EJB|F Chain F, Crystal Structure Of P450bioi In Complex With
Tetradecanoic Acid Ligated Acyl Carrier Protein
pdb|3EJB|H Chain H, Crystal Structure Of P450bioi In Complex With
Tetradecanoic Acid Ligated Acyl Carrier Protein
pdb|3EJD|B Chain B, Crystal Structure Of P450bioi In Complex With Hexadec-9z-
Enoic Acid Ligated Acyl Carrier Protein
pdb|3EJD|D Chain D, Crystal Structure Of P450bioi In Complex With Hexadec-9z-
Enoic Acid Ligated Acyl Carrier Protein
pdb|3EJD|F Chain F, Crystal Structure Of P450bioi In Complex With Hexadec-9z-
Enoic Acid Ligated Acyl Carrier Protein
pdb|3EJD|H Chain H, Crystal Structure Of P450bioi In Complex With Hexadec-9z-
Enoic Acid Ligated Acyl Carrier Protein
pdb|3EJE|B Chain B, Crystal Structure Of P450bioi In Complex With Octadec-9z-
Enoic Acid Ligated Acyl Carrier Protein
pdb|3EJE|D Chain D, Crystal Structure Of P450bioi In Complex With Octadec-9z-
Enoic Acid Ligated Acyl Carrier Protein
pdb|3EJE|F Chain F, Crystal Structure Of P450bioi In Complex With Octadec-9z-
Enoic Acid Ligated Acyl Carrier Protein
pdb|3EJE|H Chain H, Crystal Structure Of P450bioi In Complex With Octadec-9z-
Enoic Acid Ligated Acyl Carrier Protein
Length = 404
Score = 34.7 bits (78), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 19/61 (31%), Positives = 30/61 (49%)
Query: 35 CVIKETLRLFPAAPLIGRHIDEDFILDGLTIPAGVTVLISIYALHRDPKYYPSPGRFDPS 94
++E LR + R ED + G+TI G V + + A +RDP + +P FD +
Sbjct: 269 TAVEECLRYESPTQMTARVASEDIDICGVTIRQGEQVYLLLGAANRDPSIFTNPDVFDIT 328
Query: 95 R 95
R
Sbjct: 329 R 329
>pdb|2WV2|A Chain A, X-Ray Structure Of Cyp51 From The Human Pathogen
Trypanosoma Brucei In Complex With Fluconazole
Length = 475
Score = 34.3 bits (77), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 17/67 (25%), Positives = 32/67 (47%)
Query: 29 QLEYLECVIKETLRLFPAAPLIGRHIDEDFILDGLTIPAGVTVLISIYALHRDPKYYPSP 88
++ + E +E++R P ++ R + D + +P G + S H D + +P P
Sbjct: 324 EMPFAERCARESIRRDPPLLMLMRKVMADVKVGSYVVPKGDIIACSPLLSHHDEEAFPEP 383
Query: 89 GRFDPSR 95
R+DP R
Sbjct: 384 RRWDPER 390
>pdb|3GW9|A Chain A, Crystal Structure Of Sterol 14-Alpha Demethylase (Cyp51)
From Trypanosoma Brucei Bound To An Inhibitor N-(1-(2,4-
Dichlorophenyl)-2-(1h-Imidazol-1-Yl)ethyl)-4-(5-Phenyl-
1,3, 4-Oxaziazol-2-Yl)benzamide
pdb|3GW9|B Chain B, Crystal Structure Of Sterol 14-Alpha Demethylase (Cyp51)
From Trypanosoma Brucei Bound To An Inhibitor N-(1-(2,4-
Dichlorophenyl)-2-(1h-Imidazol-1-Yl)ethyl)-4-(5-Phenyl-
1,3, 4-Oxaziazol-2-Yl)benzamide
pdb|3GW9|C Chain C, Crystal Structure Of Sterol 14-Alpha Demethylase (Cyp51)
From Trypanosoma Brucei Bound To An Inhibitor N-(1-(2,4-
Dichlorophenyl)-2-(1h-Imidazol-1-Yl)ethyl)-4-(5-Phenyl-
1,3, 4-Oxaziazol-2-Yl)benzamide
pdb|3GW9|D Chain D, Crystal Structure Of Sterol 14-Alpha Demethylase (Cyp51)
From Trypanosoma Brucei Bound To An Inhibitor N-(1-(2,4-
Dichlorophenyl)-2-(1h-Imidazol-1-Yl)ethyl)-4-(5-Phenyl-
1,3, 4-Oxaziazol-2-Yl)benzamide
Length = 450
Score = 34.3 bits (77), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 17/67 (25%), Positives = 32/67 (47%)
Query: 29 QLEYLECVIKETLRLFPAAPLIGRHIDEDFILDGLTIPAGVTVLISIYALHRDPKYYPSP 88
++ + E +E++R P ++ R + D + +P G + S H D + +P P
Sbjct: 311 EMPFAERCARESIRRDPPLLMLMRKVMADVKVGSYVVPKGDIIACSPLLSHHDEEAFPEP 370
Query: 89 GRFDPSR 95
R+DP R
Sbjct: 371 RRWDPER 377
>pdb|3G1Q|A Chain A, Crystal Structure Of Sterol 14-Alpha Demethylase (Cyp51)
From Trypanosoma Brucei In Ligand Free State
pdb|3G1Q|B Chain B, Crystal Structure Of Sterol 14-Alpha Demethylase (Cyp51)
From Trypanosoma Brucei In Ligand Free State
pdb|3G1Q|C Chain C, Crystal Structure Of Sterol 14-Alpha Demethylase (Cyp51)
From Trypanosoma Brucei In Ligand Free State
pdb|3G1Q|D Chain D, Crystal Structure Of Sterol 14-Alpha Demethylase (Cyp51)
From Trypanosoma Brucei In Ligand Free State
Length = 450
Score = 34.3 bits (77), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 17/67 (25%), Positives = 32/67 (47%)
Query: 29 QLEYLECVIKETLRLFPAAPLIGRHIDEDFILDGLTIPAGVTVLISIYALHRDPKYYPSP 88
++ + E +E++R P ++ R + D + +P G + S H D + +P P
Sbjct: 312 EMPFAERCARESIRRDPPLLMLMRKVMADVKVGSYVVPKGDIIACSPLLSHHDEEAFPEP 371
Query: 89 GRFDPSR 95
R+DP R
Sbjct: 372 RRWDPER 378
>pdb|3P99|A Chain A, Sterol 14alpha-Demethylase (Cyp51) From Trypanosoma Brucei
In Complex With
Delta7-14alpha-Methylene-Cyclopropyl-Dihydrolanosterol
pdb|3P99|B Chain B, Sterol 14alpha-Demethylase (Cyp51) From Trypanosoma Brucei
In Complex With
Delta7-14alpha-Methylene-Cyclopropyl-Dihydrolanosterol
pdb|3P99|C Chain C, Sterol 14alpha-Demethylase (Cyp51) From Trypanosoma Brucei
In Complex With
Delta7-14alpha-Methylene-Cyclopropyl-Dihydrolanosterol
pdb|3P99|D Chain D, Sterol 14alpha-Demethylase (Cyp51) From Trypanosoma Brucei
In Complex With
Delta7-14alpha-Methylene-Cyclopropyl-Dihydrolanosterol
Length = 453
Score = 34.3 bits (77), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 17/67 (25%), Positives = 32/67 (47%)
Query: 29 QLEYLECVIKETLRLFPAAPLIGRHIDEDFILDGLTIPAGVTVLISIYALHRDPKYYPSP 88
++ + E +E++R P ++ R + D + +P G + S H D + +P P
Sbjct: 310 EMPFAERCARESIRRDPPLLMLMRKVMADVKVGSYVVPKGDIIACSPLLSHHDEEAFPEP 369
Query: 89 GRFDPSR 95
R+DP R
Sbjct: 370 RRWDPER 376
>pdb|2X2N|A Chain A, X-Ray Structure Of Cyp51 From Trypanosoma Brucei In
Complex With Posaconazole In Two Different Conformations
pdb|2X2N|B Chain B, X-Ray Structure Of Cyp51 From Trypanosoma Brucei In
Complex With Posaconazole In Two Different Conformations
pdb|2X2N|C Chain C, X-Ray Structure Of Cyp51 From Trypanosoma Brucei In
Complex With Posaconazole In Two Different Conformations
pdb|2X2N|D Chain D, X-Ray Structure Of Cyp51 From Trypanosoma Brucei In
Complex With Posaconazole In Two Different Conformations
Length = 475
Score = 34.3 bits (77), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 17/67 (25%), Positives = 32/67 (47%)
Query: 29 QLEYLECVIKETLRLFPAAPLIGRHIDEDFILDGLTIPAGVTVLISIYALHRDPKYYPSP 88
++ + E +E++R P ++ R + D + +P G + S H D + +P P
Sbjct: 324 EMPFAERCARESIRRDPPLLMLMRKVMADVKVGSYVVPKGDIIACSPLLSHHDEEAFPEP 383
Query: 89 GRFDPSR 95
R+DP R
Sbjct: 384 RRWDPER 390
>pdb|3TIK|A Chain A, Sterol 14-Alpha Demethylase (Cyp51) From Trypanosoma
Brucei In Complex With The Tipifarnib Derivative
6-((4-Chlorophenyl)(Methoxy)(1-Methyl-
1h-Imidazol-5-Yl)methyl)-4-(2,
6-Difluorophenyl)-1-Methylquinolin- 2(1h)-One
pdb|3TIK|B Chain B, Sterol 14-Alpha Demethylase (Cyp51) From Trypanosoma
Brucei In Complex With The Tipifarnib Derivative
6-((4-Chlorophenyl)(Methoxy)(1-Methyl-
1h-Imidazol-5-Yl)methyl)-4-(2,
6-Difluorophenyl)-1-Methylquinolin- 2(1h)-One
pdb|3TIK|C Chain C, Sterol 14-Alpha Demethylase (Cyp51) From Trypanosoma
Brucei In Complex With The Tipifarnib Derivative
6-((4-Chlorophenyl)(Methoxy)(1-Methyl-
1h-Imidazol-5-Yl)methyl)-4-(2,
6-Difluorophenyl)-1-Methylquinolin- 2(1h)-One
pdb|3TIK|D Chain D, Sterol 14-Alpha Demethylase (Cyp51) From Trypanosoma
Brucei In Complex With The Tipifarnib Derivative
6-((4-Chlorophenyl)(Methoxy)(1-Methyl-
1h-Imidazol-5-Yl)methyl)-4-(2,
6-Difluorophenyl)-1-Methylquinolin- 2(1h)-One
Length = 454
Score = 34.3 bits (77), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 17/67 (25%), Positives = 32/67 (47%)
Query: 29 QLEYLECVIKETLRLFPAAPLIGRHIDEDFILDGLTIPAGVTVLISIYALHRDPKYYPSP 88
++ + E +E++R P ++ R + D + +P G + S H D + +P P
Sbjct: 311 EMPFAERCARESIRRDPPLLMLMRKVMADVKVGSYVVPKGDIIACSPLLSHHDEEAFPEP 370
Query: 89 GRFDPSR 95
R+DP R
Sbjct: 371 RRWDPER 377
>pdb|3LD6|A Chain A, Crystal Structure Of Human Lanosterol 14alpha-Demethylase
(C Complex With Ketoconazole
pdb|3LD6|B Chain B, Crystal Structure Of Human Lanosterol 14alpha-Demethylase
(C Complex With Ketoconazole
pdb|3JUS|A Chain A, Crystal Structure Of Human Lanosterol 14alpha-Demethylase
(Cyp51) In Complex With Econazole
pdb|3JUS|B Chain B, Crystal Structure Of Human Lanosterol 14alpha-Demethylase
(Cyp51) In Complex With Econazole
pdb|3JUV|A Chain A, Crystal Structure Of Human Lanosterol 14alpha-Demethylase
(C
Length = 461
Score = 33.9 bits (76), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 24/76 (31%), Positives = 36/76 (47%)
Query: 23 SYEDLCQLEYLECVIKETLRLFPAAPLIGRHIDEDFILDGLTIPAGVTVLISIYALHRDP 82
+Y+ L L L+ IKETLRL P ++ R + G TIP G V +S R
Sbjct: 305 TYDQLKDLNLLDRCIKETLRLRPPIMIMMRMARTPQTVAGYTIPPGHQVCVSPTVNQRLK 364
Query: 83 KYYPSPGRFDPSRWMR 98
+ F+P R+++
Sbjct: 365 DSWVERLDFNPDRYLQ 380
Score = 28.1 bits (61), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 29/88 (32%), Positives = 35/88 (39%), Gaps = 11/88 (12%)
Query: 94 SRWMRFRFRGDKTSAPLLELPLIPTSFVLEEIDRVLGRNTTHCPSYEDLCQLEYLECVIK 153
S WM F DKT L E V G N +Y+ L L L+ IK
Sbjct: 272 SAWMGFFLARDKTLQKKCYL----------EQKTVCGENLPPL-TYDQLKDLNLLDRCIK 320
Query: 154 ETLRLFPAAPLIGRHIDEDFILDGLTIP 181
ETLRL P ++ R + G TIP
Sbjct: 321 ETLRLRPPIMIMMRMARTPQTVAGYTIP 348
>pdb|1N97|A Chain A, Crystal Stucture Of Cyp175a1 From Thermus Thermophillus
Strain Hb27
pdb|1N97|B Chain B, Crystal Stucture Of Cyp175a1 From Thermus Thermophillus
Strain Hb27
Length = 389
Score = 33.1 bits (74), Expect = 0.085, Method: Compositional matrix adjust.
Identities = 19/64 (29%), Positives = 34/64 (53%), Gaps = 2/64 (3%)
Query: 37 IKETLRLFPAAPLIGRHIDEDFILDGLTIPAGVTVLISIYALHRDPKYYPSPGRFDPSRW 96
+E LRL+P A ++ R ++ +L +P G T+++S Y R ++P F P R+
Sbjct: 258 FQEALRLYPPAWILTRRLERPLLLGEDRLPPGTTLVLSPYVTQR--LHFPDGEAFRPERF 315
Query: 97 MRFR 100
+ R
Sbjct: 316 LEER 319
>pdb|2DKK|A Chain A, Structure/function Studies Of Cytochrome P450 158a1 From
Streptomyces Coelicolor A3(2)
Length = 411
Score = 33.1 bits (74), Expect = 0.086, Method: Compositional matrix adjust.
Identities = 17/40 (42%), Positives = 21/40 (52%)
Query: 56 EDFILDGLTIPAGVTVLISIYALHRDPKYYPSPGRFDPSR 95
ED + G I AG V +S A +RDP +P P R D R
Sbjct: 302 EDVEVHGTRIAAGEPVYVSYLAANRDPDVFPDPDRIDLDR 341
>pdb|2NZ5|A Chain A, Structure And Function Studies Of Cytochrome P450 158a1
From Streptomyces Coelicolor A3(2)
pdb|2NZ5|B Chain B, Structure And Function Studies Of Cytochrome P450 158a1
From Streptomyces Coelicolor A3(2)
pdb|2NZA|A Chain A, Structure And Function Studies Of Cytochrome P450 158a1
From Streptomyces Coelicolor A3(2)
pdb|2NZA|B Chain B, Structure And Function Studies Of Cytochrome P450 158a1
From Streptomyces Coelicolor A3(2)
Length = 413
Score = 33.1 bits (74), Expect = 0.089, Method: Compositional matrix adjust.
Identities = 17/40 (42%), Positives = 21/40 (52%)
Query: 56 EDFILDGLTIPAGVTVLISIYALHRDPKYYPSPGRFDPSR 95
ED + G I AG V +S A +RDP +P P R D R
Sbjct: 302 EDVEVHGTRIAAGEPVYVSYLAANRDPDVFPDPDRIDLDR 341
>pdb|1UED|A Chain A, Crystal Structure Of Oxyc A Cytochrome P450 Implicated In
An Oxidative C-C Coupling Reaction During Vancomycin
Biosynthesis.
pdb|1UED|B Chain B, Crystal Structure Of Oxyc A Cytochrome P450 Implicated In
An Oxidative C-C Coupling Reaction During Vancomycin
Biosynthesis
Length = 406
Score = 33.1 bits (74), Expect = 0.090, Method: Compositional matrix adjust.
Identities = 24/66 (36%), Positives = 31/66 (46%), Gaps = 1/66 (1%)
Query: 31 EYLECVIKETLR-LFPAAPLIGRHIDEDFILDGLTIPAGVTVLISIYALHRDPKYYPSPG 89
E E V+ E +R L P R +D ++DG I AG VL SI +RD P P
Sbjct: 276 EKAERVVNELVRYLSPVQAPNPRLAIKDVVIDGQLIKAGDYVLCSILMANRDEALTPDPD 335
Query: 90 RFDPSR 95
D +R
Sbjct: 336 VLDANR 341
>pdb|2WUZ|A Chain A, X-Ray Structure Of Cyp51 From Trypanosoma Cruzi In Complex
With Fluconazole In Alternative Conformation
pdb|2WUZ|B Chain B, X-Ray Structure Of Cyp51 From Trypanosoma Cruzi In Complex
With Fluconazole In Alternative Conformation
pdb|2WX2|A Chain A, X-Ray Structure Of Cyp51 From The Human Pathogen
Trypanosoma Cruzi In Complex With Fluconazole
pdb|2WX2|B Chain B, X-Ray Structure Of Cyp51 From The Human Pathogen
Trypanosoma Cruzi In Complex With Fluconazole
Length = 473
Score = 32.7 bits (73), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 15/67 (22%), Positives = 33/67 (49%)
Query: 29 QLEYLECVIKETLRLFPAAPLIGRHIDEDFILDGLTIPAGVTVLISIYALHRDPKYYPSP 88
++ + E ++E++R P ++ R + + + +P G + S H D + +P+P
Sbjct: 324 EMPFAERCVRESIRRDPPLLMVMRMVKAEVKVGSYVVPKGDIIACSPLLSHHDEEAFPNP 383
Query: 89 GRFDPSR 95
+DP R
Sbjct: 384 RLWDPER 390
>pdb|3K1O|A Chain A, Crystal Structure Of Sterol 14-alpha Demethylase (cyp51)
From Trypanosoma Cruzi In Complex With A Potential
Antichagasic Drug, Posaconazole
pdb|3KSW|A Chain A, Crystal Structure Of Sterol 14alpha-demethylase (cyp51)
From Trypanosoma Cruzi In Complex With An Inhibitor Vnf
((4-(4-
Chlorophenyl)-n-[2-(1h-imidazol-1-yl)-1-
phenylethyl]benzamide)
Length = 458
Score = 32.7 bits (73), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 15/67 (22%), Positives = 33/67 (49%)
Query: 29 QLEYLECVIKETLRLFPAAPLIGRHIDEDFILDGLTIPAGVTVLISIYALHRDPKYYPSP 88
++ + E ++E++R P ++ R + + + +P G + S H D + +P+P
Sbjct: 309 EMPFAERCVRESIRRDPPLLMVMRMVKAEVKVGSYVVPKGDIIACSPLLSHHDEEAFPNP 368
Query: 89 GRFDPSR 95
+DP R
Sbjct: 369 RLWDPER 375
>pdb|3KHM|A Chain A, Crystal Structure Of Sterol 14alpha-Demethylase (Cyp51)
From Trypanosoma Cruzi In Complex With Inhibitor
Fluconazole
Length = 464
Score = 32.7 bits (73), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 15/67 (22%), Positives = 33/67 (49%)
Query: 29 QLEYLECVIKETLRLFPAAPLIGRHIDEDFILDGLTIPAGVTVLISIYALHRDPKYYPSP 88
++ + E ++E++R P ++ R + + + +P G + S H D + +P+P
Sbjct: 315 EMPFAERCVRESIRRDPPLLMVMRMVKAEVKVGSYVVPKGDIIACSPLLSHHDEEAFPNP 374
Query: 89 GRFDPSR 95
+DP R
Sbjct: 375 RLWDPER 381
>pdb|1ODO|A Chain A, 1.85 A Structure Of Cyp154a1 From Streptomyces Coelicolor
A3(2)
Length = 408
Score = 32.0 bits (71), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 25/67 (37%), Positives = 35/67 (52%), Gaps = 6/67 (8%)
Query: 36 VIKETLRLFPAA---PLIGRHIDEDFIL-DGLTIPAGVTVLISIYALHRDPKYYPSPGRF 91
V++ETLR PA PL R+ D L DG TI G +L S A +R P ++ F
Sbjct: 278 VVEETLRHEPAVKHLPL--RYAVTDIALPDGRTIARGEPILASYAAANRHPDWHEDADTF 335
Query: 92 DPSRWMR 98
D +R ++
Sbjct: 336 DATRTVK 342
>pdb|1LFK|A Chain A, Crystal Structure Of Oxyb, A Cytochrome P450 Implicated In
An Oxidative Phenol Coupling Reaction During Vancomycin
Biosynthesis
pdb|1LG9|A Chain A, Crystal Structure Of Oxyb, A Cytochrome P450 Implicated In
An Oxidative Phenol Coupling Reaction During Vancomycin
Biosynthesis
pdb|1LGF|A Chain A, Crystal Structure Of Oxyb, A Cytochrome P450 Implicated In
An Oxidative Phenol Coupling Reaction During Vancomycin
Biosynthesis
Length = 398
Score = 31.6 bits (70), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 41/135 (30%), Positives = 50/135 (37%), Gaps = 34/135 (25%)
Query: 48 PLIGRHIDEDFILDGLTIPAGVTVLISIYALHRDPKYYPSPGRFDPSRWMRFRFRGDKTS 107
P I R ED L G I G +V+ S+ A +RDP P R D +R
Sbjct: 288 PRIAR---EDLTLAGQEIKKGDSVICSLPAANRDPALAPDVDRLDVTRE----------- 333
Query: 108 APLLELPLIPTSFVLEEIDRVLGRNTTHCPSYEDLCQLEYLECVIKETLRLFPAAPLIGR 167
P+ +F G HC L +LE L V E R FPA L
Sbjct: 334 ------PIPHVAF---------GHGVHHCLGAA-LARLE-LRTVFTELWRRFPALRLADP 376
Query: 168 HIDEDFILDGLTIPA 182
D +F LT PA
Sbjct: 377 AQDTEFR---LTTPA 388
>pdb|2FR7|A Chain A, Crystal Structure Of Cytochrome P450 Cyp199a2
pdb|4DNJ|A Chain A, The Crystal Structures Of 4-Methoxybenzoate Bound Cyp199a2
Length = 412
Score = 31.6 bits (70), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 16/44 (36%), Positives = 24/44 (54%)
Query: 52 RHIDEDFILDGLTIPAGVTVLISIYALHRDPKYYPSPGRFDPSR 95
R D L G TI G VL+ + + +RDP+ + P R+D +R
Sbjct: 303 RTTTRDVELAGATIGEGEKVLMFLGSANRDPRRWDDPDRYDITR 346
>pdb|2Z3T|A Chain A, Crystal Structure Of Substrate Free Cytochrome P450 Stap
(cyp245a1)
pdb|2Z3T|B Chain B, Crystal Structure Of Substrate Free Cytochrome P450 Stap
(cyp245a1)
pdb|2Z3T|C Chain C, Crystal Structure Of Substrate Free Cytochrome P450 Stap
(cyp245a1)
pdb|2Z3T|D Chain D, Crystal Structure Of Substrate Free Cytochrome P450 Stap
(cyp245a1)
pdb|2Z3U|A Chain A, Crystal Structure Of Chromopyrrolic Acid Bound Cytochrome
P450 Stap (Cyp245a1)
pdb|3A1L|A Chain A, Crystal Structure Of 11,11'-Dichlorochromopyrrolic Acid
Bound Cytochrome P450 Stap (Cyp245a1)
Length = 425
Score = 31.6 bits (70), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 19/65 (29%), Positives = 28/65 (43%)
Query: 31 EYLECVIKETLRLFPAAPLIGRHIDEDFILDGLTIPAGVTVLISIYALHRDPKYYPSPGR 90
E ++E +R P + R ED L IP G V+ + + +RDP +P P
Sbjct: 285 ESTPAAVEELMRYDPPVQAVTRWAYEDIRLGDHDIPRGSRVVALLGSANRDPARFPDPDV 344
Query: 91 FDPSR 95
D R
Sbjct: 345 LDVHR 349
>pdb|3L4D|A Chain A, Crystal Structure Of Sterol 14-Alpha Demethylase (Cyp51)
From Leishmania Infantum In Complex With Fluconazole
pdb|3L4D|B Chain B, Crystal Structure Of Sterol 14-Alpha Demethylase (Cyp51)
From Leishmania Infantum In Complex With Fluconazole
pdb|3L4D|C Chain C, Crystal Structure Of Sterol 14-Alpha Demethylase (Cyp51)
From Leishmania Infantum In Complex With Fluconazole
pdb|3L4D|D Chain D, Crystal Structure Of Sterol 14-Alpha Demethylase (Cyp51)
From Leishmania Infantum In Complex With Fluconazole
Length = 453
Score = 31.2 bits (69), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 15/71 (21%), Positives = 35/71 (49%)
Query: 29 QLEYLECVIKETLRLFPAAPLIGRHIDEDFILDGLTIPAGVTVLISIYALHRDPKYYPSP 88
++ + E +E++R P ++ R + + + +P G + S H+D + +P+P
Sbjct: 310 EMPFAEQCARESIRRDPPLVMLMRKVLKPVQVGKYVVPEGDIIACSPLLSHQDEEAFPNP 369
Query: 89 GRFDPSRWMRF 99
++P R M+
Sbjct: 370 REWNPERNMKL 380
>pdb|3TYW|A Chain A, Crystal Structure Of Cyp105n1 From Streptomyces Coelicolor
A3(2)
pdb|3TYW|B Chain B, Crystal Structure Of Cyp105n1 From Streptomyces Coelicolor
A3(2)
pdb|3TYW|C Chain C, Crystal Structure Of Cyp105n1 From Streptomyces Coelicolor
A3(2)
pdb|3TYW|D Chain D, Crystal Structure Of Cyp105n1 From Streptomyces Coelicolor
A3(2)
pdb|4FXB|A Chain A, Crystal Structure Of Cyp105n1 From Streptomyces
Coelicolor: A Cytochrome P450 Oxidase In The Coelibactin
Siderophore Biosynthetic Pathway
pdb|4FXB|B Chain B, Crystal Structure Of Cyp105n1 From Streptomyces
Coelicolor: A Cytochrome P450 Oxidase In The Coelibactin
Siderophore Biosynthetic Pathway
Length = 417
Score = 30.0 bits (66), Expect = 0.77, Method: Compositional matrix adjust.
Identities = 19/63 (30%), Positives = 29/63 (46%), Gaps = 1/63 (1%)
Query: 31 EYLECVIKETLRLFPAAPLIG-RHIDEDFILDGLTIPAGVTVLISIYALHRDPKYYPSPG 89
+ + + E LR+ A I R ED L G T+PA V+ + + DP+ + P
Sbjct: 280 DLMPAAVDELLRVLSVADSIPLRVAAEDIELSGRTVPADDGVIALLAGANHDPEQFDDPE 339
Query: 90 RFD 92
R D
Sbjct: 340 RVD 342
>pdb|2UUQ|A Chain A, Crystal Structure Of Cyp130 From Mycobacterium
Tuberculosis In The Ligand-Free Form
pdb|2UVN|A Chain A, Crystal Structure Of Econazole-Bound Cyp130 From
Mycobacterium Tuberculosis
pdb|2UVN|B Chain B, Crystal Structure Of Econazole-Bound Cyp130 From
Mycobacterium Tuberculosis
Length = 414
Score = 30.0 bits (66), Expect = 0.85, Method: Compositional matrix adjust.
Identities = 20/66 (30%), Positives = 30/66 (45%), Gaps = 1/66 (1%)
Query: 31 EYLECVIKETLRLFPAAPLIGRHIDEDFILDGLTIPAGVTVLISIYALHRDPKYY-PSPG 89
E + ++E LRL + R D + TIPAG VL+ + +RD + Y P
Sbjct: 281 EGIPDAVEELLRLTSPVQGLARTTTRDVTIGDTTIPAGRRVLLLYGSANRDERQYGPDAA 340
Query: 90 RFDPSR 95
D +R
Sbjct: 341 ELDVTR 346
>pdb|2WH8|A Chain A, Interaction Of Mycobacterium Tuberculosis Cyp130 With
Heterocyclic Arylamines
pdb|2WH8|B Chain B, Interaction Of Mycobacterium Tuberculosis Cyp130 With
Heterocyclic Arylamines
pdb|2WH8|C Chain C, Interaction Of Mycobacterium Tuberculosis Cyp130 With
Heterocyclic Arylamines
pdb|2WH8|D Chain D, Interaction Of Mycobacterium Tuberculosis Cyp130 With
Heterocyclic Arylamines
pdb|2WHF|A Chain A, Interaction Of Mycobacterium Tuberculosis Cyp130 With
Heterocyclic Arylamines
Length = 413
Score = 30.0 bits (66), Expect = 0.86, Method: Compositional matrix adjust.
Identities = 20/66 (30%), Positives = 30/66 (45%), Gaps = 1/66 (1%)
Query: 31 EYLECVIKETLRLFPAAPLIGRHIDEDFILDGLTIPAGVTVLISIYALHRDPKYY-PSPG 89
E + ++E LRL + R D + TIPAG VL+ + +RD + Y P
Sbjct: 280 EGIPDAVEELLRLTSPVQGLARTTTRDVTIGDTTIPAGRRVLLLYGSANRDERQYGPDAA 339
Query: 90 RFDPSR 95
D +R
Sbjct: 340 ELDVTR 345
>pdb|2WGY|A Chain A, Crystal Structure Of The G243a Mutant Of Cyp130 From M.
Tuberculosis
Length = 413
Score = 29.6 bits (65), Expect = 0.87, Method: Compositional matrix adjust.
Identities = 19/61 (31%), Positives = 28/61 (45%), Gaps = 1/61 (1%)
Query: 36 VIKETLRLFPAAPLIGRHIDEDFILDGLTIPAGVTVLISIYALHRDPKYY-PSPGRFDPS 94
++E LRL + R D + TIPAG VL+ + +RD + Y P D +
Sbjct: 285 AVEELLRLTSPVQGLARTTTRDVTIGDTTIPAGRRVLLLYGSANRDERQYGPDAAELDVT 344
Query: 95 R 95
R
Sbjct: 345 R 345
>pdb|3E5L|A Chain A, Crystal Structure Of Cyp105p1 H72a Mutant
Length = 403
Score = 28.9 bits (63), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 18/61 (29%), Positives = 26/61 (42%), Gaps = 1/61 (1%)
Query: 36 VIKETLRLFPAAPLIGRHI-DEDFILDGLTIPAGVTVLISIYALHRDPKYYPSPGRFDPS 94
++E LR G + D L G+ I G V+ + A DP + P RFD +
Sbjct: 273 AVEELLRYLTIGQFGGERVATRDVELGGVRIAKGEQVVAHVLAADFDPAFVEEPERFDIT 332
Query: 95 R 95
R
Sbjct: 333 R 333
>pdb|3ABA|A Chain A, Crystal Structure Of Cyp105p1 In Complex With Filipin I
Length = 403
Score = 28.9 bits (63), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 18/61 (29%), Positives = 26/61 (42%), Gaps = 1/61 (1%)
Query: 36 VIKETLRLFPAAPLIGRHI-DEDFILDGLTIPAGVTVLISIYALHRDPKYYPSPGRFDPS 94
++E LR G + D L G+ I G V+ + A DP + P RFD +
Sbjct: 273 AVEELLRYLTIGQFGGERVATRDVELGGVRIAKGEQVVAHVLAADFDPAFVEEPERFDIT 332
Query: 95 R 95
R
Sbjct: 333 R 333
>pdb|3E5J|A Chain A, Crystal Structure Of Cyp105p1 Wild-type Ligand-free Form
pdb|3E5K|A Chain A, Crystal Structure Of Cyp105p1 Wild-Type 4-Phenylimidazole
Complex
Length = 403
Score = 28.9 bits (63), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 18/61 (29%), Positives = 26/61 (42%), Gaps = 1/61 (1%)
Query: 36 VIKETLRLFPAAPLIGRHI-DEDFILDGLTIPAGVTVLISIYALHRDPKYYPSPGRFDPS 94
++E LR G + D L G+ I G V+ + A DP + P RFD +
Sbjct: 273 AVEELLRYLTIGQFGGERVATRDVELGGVRIAKGEQVVAHVLAADFDPAFVEEPERFDIT 332
Query: 95 R 95
R
Sbjct: 333 R 333
>pdb|2X9P|A Chain A, X-Ray Structure Of The Substrate-Free Cytochrome P450 Pimd
- A Polyene Macrolide Antibiotic Pimaricin Epoxidase
pdb|2XBK|A Chain A, X-Ray Structure Of The Substrate-Bound Cytochrome P450
Pimd - A Polyene Macrolide Antibiotic Pimaricin
Epoxidase
Length = 404
Score = 28.5 bits (62), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 20/71 (28%), Positives = 32/71 (45%), Gaps = 2/71 (2%)
Query: 27 LCQLEYLECVIKETLRLFPAAPLI--GRHIDEDFILDGLTIPAGVTVLISIYALHRDPKY 84
L + + ++E LR A + R+ ED G+TI AG VL + + D +
Sbjct: 268 LADPDVMARAVEEVLRTARAGGSVLPPRYASEDMEFGGVTIRAGDLVLFDLGLPNFDERA 327
Query: 85 YPSPGRFDPSR 95
+ P FD +R
Sbjct: 328 FTGPEEFDAAR 338
>pdb|2H9F|A Chain A, Crystal Structure Of A Prpf Family Methylaconitate
Isomerase (Pa0793) From Pseudomonas Aeruginosa At 1.95 A
Resolution
Length = 396
Score = 28.5 bits (62), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 15/47 (31%), Positives = 25/47 (53%), Gaps = 4/47 (8%)
Query: 140 EDLCQLEYLECVIKETLRLFPAAPLIGRHIDE--DFILDGLTIPAVE 184
+ +C++ + I +T+ P+ G + E DF LDG+T PA E
Sbjct: 130 DGICEVRIWQANIGKTI--IAHVPVSGGQVQETGDFELDGVTFPAAE 174
Score = 27.3 bits (59), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 16/50 (32%), Positives = 26/50 (52%), Gaps = 4/50 (8%)
Query: 25 EDLCQLEYLECVIKETLRLFPAAPLIGRHIDE--DFILDGLTIPAGVTVL 72
+ +C++ + I +T+ P+ G + E DF LDG+T PA VL
Sbjct: 130 DGICEVRIWQANIGKTI--IAHVPVSGGQVQETGDFELDGVTFPAAEIVL 177
>pdb|3GFX|A Chain A, Klebsiella Pneumoniae Blrp1 Ph 4.5 CalciumCY-Digmp Complex
pdb|3GFX|B Chain B, Klebsiella Pneumoniae Blrp1 Ph 4.5 CalciumCY-Digmp Complex
pdb|3GFY|A Chain A, Klebsiella Pneumoniae Blrp1 With Fmn And Cyclic Digmp, No
Metal Ions
pdb|3GFY|B Chain B, Klebsiella Pneumoniae Blrp1 With Fmn And Cyclic Digmp, No
Metal Ions
pdb|3GFZ|A Chain A, Klebsiella Pneumoniae Blrp1 Ph 6 Manganese/cy-digmp
Complex
pdb|3GFZ|B Chain B, Klebsiella Pneumoniae Blrp1 Ph 6 Manganese/cy-digmp
Complex
pdb|3GG0|A Chain A, Klebsiella Pneumoniae Blrp1 Ph 9.0 ManganeseCY-Digmp
Complex
pdb|3GG0|B Chain B, Klebsiella Pneumoniae Blrp1 Ph 9.0 ManganeseCY-Digmp
Complex
pdb|3GG1|A Chain A, Klebsiella Pneumoniae Blrp1 Ph 8.0 CalciumCY-Digmp Complex
pdb|3GG1|B Chain B, Klebsiella Pneumoniae Blrp1 Ph 8.0 CalciumCY-Digmp Complex
Length = 413
Score = 27.3 bits (59), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 22/64 (34%), Positives = 27/64 (42%), Gaps = 3/64 (4%)
Query: 62 GLTIPAGVTVLISIYALHRDPKYYPSPGRFDPSRWMRFRFRGDKTSAPLLELPLIPTSFV 121
G+T P + + A D Y P PSRWM G T+AP LP P F
Sbjct: 124 GVTEPVNDRMFRLLSAFIADGGRYCLPEPLQPSRWMMMPASG--TAAP-QHLPGQPCQFA 180
Query: 122 LEEI 125
L+ I
Sbjct: 181 LQAI 184
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.325 0.145 0.453
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 6,018,455
Number of Sequences: 62578
Number of extensions: 257946
Number of successful extensions: 881
Number of sequences better than 100.0: 162
Number of HSP's better than 100.0 without gapping: 149
Number of HSP's successfully gapped in prelim test: 13
Number of HSP's that attempted gapping in prelim test: 620
Number of HSP's gapped (non-prelim): 225
length of query: 184
length of database: 14,973,337
effective HSP length: 93
effective length of query: 91
effective length of database: 9,153,583
effective search space: 832976053
effective search space used: 832976053
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.5 bits)
S2: 48 (23.1 bits)