BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy6731
(258 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9WUP7|UCHL5_MOUSE Ubiquitin carboxyl-terminal hydrolase isozyme L5 OS=Mus musculus
GN=Uchl5 PE=2 SV=2
Length = 329
Score = 227 bits (579), Expect = 6e-59, Method: Compositional matrix adjust.
Identities = 104/143 (72%), Positives = 121/143 (84%)
Query: 2 SDAGNWCLIESDPGVFTELIRGFGVQGVQVEELWSLEPENLKILQPVHGLIFLFKLREDT 61
S+AG WCL+ESDPGVFTELI+GFG +G QVEE+WSLEPE+ + L+PVHGLIFLFK +
Sbjct: 3 SNAGEWCLMESDPGVFTELIKGFGCRGAQVEEIWSLEPESFEKLKPVHGLIFLFKWQPGE 62
Query: 62 EPAGSIVQDSRLETIFFAKQVVNNACATQAILSILLNNSDPEVKLGSVLTEFKDFCQSFD 121
EPAGS+VQDSRLETIFFAKQV+NNACATQAI+S+LLN + +V LG L+EFK+F QSFD
Sbjct: 63 EPAGSVVQDSRLETIFFAKQVINNACATQAIVSVLLNCTHQDVHLGETLSEFKEFSQSFD 122
Query: 122 PTMKGYALSNSQPIRTVHNSFAR 144
MKG ALSNS IR VHNSFAR
Sbjct: 123 AAMKGLALSNSDVIRQVHNSFAR 145
Score = 105 bits (261), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 57/122 (46%), Positives = 79/122 (64%), Gaps = 5/122 (4%)
Query: 137 TVHNSFARYSSEEIRFNLLAVVCDKKMKYEKELAAATQALK-----DPSLDAATKTAKQN 191
+ +YS EIRFNL+A+V D+KM YE+++A + L D + +A Q+
Sbjct: 203 VIEKRIQKYSEGEIRFNLMAIVSDRKMIYEQKIAELQRQLAEEEPMDTDQGSTVLSAIQS 262
Query: 192 EVVQLKILIEEEAAKLESYRIENIRRKHNYLPLIMNLLKLLAKQGQLVNLYQKAVELNSS 251
EV + ++LIEEE KL+ Y+IENIRRKHNYLP IM LLK LA+ QL+ L +KA E ++
Sbjct: 263 EVARNQMLIEEEVQKLKRYKIENIRRKHNYLPFIMELLKTLAEHQQLIPLVEKAKEKQNA 322
Query: 252 KK 253
KK
Sbjct: 323 KK 324
>sp|Q06AT3|UCHL5_PIG Ubiquitin carboxyl-terminal hydrolase isozyme L5 OS=Sus scrofa
GN=UCHL5 PE=2 SV=1
Length = 329
Score = 226 bits (577), Expect = 9e-59, Method: Compositional matrix adjust.
Identities = 103/143 (72%), Positives = 120/143 (83%)
Query: 2 SDAGNWCLIESDPGVFTELIRGFGVQGVQVEELWSLEPENLKILQPVHGLIFLFKLREDT 61
+AG WCL+ESDPGVFTELI+GFG +G QVEE+WSLEPEN + L+PVHGLIFLFK +
Sbjct: 3 GNAGEWCLMESDPGVFTELIKGFGCRGAQVEEIWSLEPENFEKLKPVHGLIFLFKWQPGE 62
Query: 62 EPAGSIVQDSRLETIFFAKQVVNNACATQAILSILLNNSDPEVKLGSVLTEFKDFCQSFD 121
EPAGS+VQDSRL+TIFFAKQV+NNACATQAI+S+LLN + +V LG L+EFK+F QSFD
Sbjct: 63 EPAGSVVQDSRLDTIFFAKQVINNACATQAIVSVLLNCTHQDVHLGETLSEFKEFSQSFD 122
Query: 122 PTMKGYALSNSQPIRTVHNSFAR 144
MKG ALSNS IR VHNSFAR
Sbjct: 123 AAMKGLALSNSDVIRQVHNSFAR 145
Score = 104 bits (260), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 59/130 (45%), Positives = 84/130 (64%), Gaps = 7/130 (5%)
Query: 129 LSNSQPIRTVHNSFARYSSEEIRFNLLAVVCDKKMKYEKELAAATQALK-----DPSLDA 183
+S +P+ + +YS EIRFNL+A+V D+KM YE+++A + L D +
Sbjct: 197 ISAVRPV--IEKRIQKYSEGEIRFNLMAIVSDRKMIYEQKIAELQRQLAEEEPMDTDQGS 254
Query: 184 ATKTAKQNEVVQLKILIEEEAAKLESYRIENIRRKHNYLPLIMNLLKLLAKQGQLVNLYQ 243
+A Q+EV + ++LIEEE KL+ Y+IENIRRKHNYLP IM LLK LA+ QL+ L +
Sbjct: 255 NMLSAIQSEVAKNQMLIEEEVQKLKRYKIENIRRKHNYLPFIMELLKTLAEHQQLIPLVE 314
Query: 244 KAVELNSSKK 253
KA E ++KK
Sbjct: 315 KAKEKQNAKK 324
>sp|Q9Y5K5|UCHL5_HUMAN Ubiquitin carboxyl-terminal hydrolase isozyme L5 OS=Homo sapiens
GN=UCHL5 PE=1 SV=3
Length = 329
Score = 226 bits (577), Expect = 9e-59, Method: Compositional matrix adjust.
Identities = 103/143 (72%), Positives = 120/143 (83%)
Query: 2 SDAGNWCLIESDPGVFTELIRGFGVQGVQVEELWSLEPENLKILQPVHGLIFLFKLREDT 61
+AG WCL+ESDPGVFTELI+GFG +G QVEE+WSLEPEN + L+PVHGLIFLFK +
Sbjct: 3 GNAGEWCLMESDPGVFTELIKGFGCRGAQVEEIWSLEPENFEKLKPVHGLIFLFKWQPGE 62
Query: 62 EPAGSIVQDSRLETIFFAKQVVNNACATQAILSILLNNSDPEVKLGSVLTEFKDFCQSFD 121
EPAGS+VQDSRL+TIFFAKQV+NNACATQAI+S+LLN + +V LG L+EFK+F QSFD
Sbjct: 63 EPAGSVVQDSRLDTIFFAKQVINNACATQAIVSVLLNCTHQDVHLGETLSEFKEFSQSFD 122
Query: 122 PTMKGYALSNSQPIRTVHNSFAR 144
MKG ALSNS IR VHNSFAR
Sbjct: 123 AAMKGLALSNSDVIRQVHNSFAR 145
Score = 104 bits (260), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 59/130 (45%), Positives = 84/130 (64%), Gaps = 7/130 (5%)
Query: 129 LSNSQPIRTVHNSFARYSSEEIRFNLLAVVCDKKMKYEKELAAATQALK-----DPSLDA 183
+S +P+ + +YS EIRFNL+A+V D+KM YE+++A + L D
Sbjct: 197 ISAVRPV--IEKRIQKYSEGEIRFNLMAIVSDRKMIYEQKIAELQRQLAEEEPMDTDQGN 254
Query: 184 ATKTAKQNEVVQLKILIEEEAAKLESYRIENIRRKHNYLPLIMNLLKLLAKQGQLVNLYQ 243
+ +A Q+EV + ++LIEEE KL+ Y+IENIRRKHNYLP IM LLK LA+ QL+ L +
Sbjct: 255 SMLSAIQSEVAKNQMLIEEEVQKLKRYKIENIRRKHNYLPFIMELLKTLAEHQQLIPLVE 314
Query: 244 KAVELNSSKK 253
KA E ++KK
Sbjct: 315 KAKEKQNAKK 324
>sp|Q9XSJ0|UCHL5_BOVIN Ubiquitin carboxyl-terminal hydrolase isozyme L5 OS=Bos taurus
GN=UCHL5 PE=2 SV=1
Length = 328
Score = 226 bits (577), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 103/143 (72%), Positives = 120/143 (83%)
Query: 2 SDAGNWCLIESDPGVFTELIRGFGVQGVQVEELWSLEPENLKILQPVHGLIFLFKLREDT 61
+AG WCL+ESDPGVFTELI+GFG +G QVEE+WSLEPEN + L+PVHGLIFLFK +
Sbjct: 3 GNAGEWCLMESDPGVFTELIKGFGCRGAQVEEIWSLEPENFEKLKPVHGLIFLFKWQPGE 62
Query: 62 EPAGSIVQDSRLETIFFAKQVVNNACATQAILSILLNNSDPEVKLGSVLTEFKDFCQSFD 121
EPAGS+VQDSRL+TIFFAKQV+NNACATQAI+S+LLN + +V LG L+EFK+F QSFD
Sbjct: 63 EPAGSVVQDSRLDTIFFAKQVINNACATQAIVSVLLNCTHQDVHLGETLSEFKEFSQSFD 122
Query: 122 PTMKGYALSNSQPIRTVHNSFAR 144
MKG ALSNS IR VHNSFAR
Sbjct: 123 AAMKGLALSNSDVIRQVHNSFAR 145
Score = 107 bits (267), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 59/129 (45%), Positives = 85/129 (65%), Gaps = 6/129 (4%)
Query: 129 LSNSQPIRTVHNSFARYSSEEIRFNLLAVVCDKKMKYEKELAAATQALKDPSLDAATKT- 187
+S +P+ + +YS EIRFNL+A+V D+KM YE+++A + L + +D +
Sbjct: 197 ISAVRPV--IEKRIQKYSEGEIRFNLMAIVSDRKMIYEQKIAELQRQLAEEPMDTDQGSN 254
Query: 188 ---AKQNEVVQLKILIEEEAAKLESYRIENIRRKHNYLPLIMNLLKLLAKQGQLVNLYQK 244
A Q+EV + ++LIEEE KL+ Y+IENIRRKHNYLP IM LLK LA+ QL+ L +K
Sbjct: 255 MLSAIQSEVAKNQMLIEEEVQKLKRYKIENIRRKHNYLPFIMELLKTLAEHQQLIPLVEK 314
Query: 245 AVELNSSKK 253
A E ++KK
Sbjct: 315 AKEKQNAKK 323
>sp|Q09444|UBH4_CAEEL Probable ubiquitin carboxyl-terminal hydrolase ubh-4
OS=Caenorhabditis elegans GN=ubh-4 PE=3 SV=2
Length = 321
Score = 192 bits (488), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 122/314 (38%), Positives = 175/314 (55%), Gaps = 64/314 (20%)
Query: 1 MSDAGNWCLIESDPGVFTELIRGFGVQGVQVEELWSLEPENLKILQPVHGLIFLFKLRED 60
M+DAG+WCLIESDPGVFTE++RGFGV G+QVEEL+SL+ ++ + +P +GLIFLFK R+
Sbjct: 1 MTDAGSWCLIESDPGVFTEMLRGFGVDGLQVEELYSLD-DDKAMTRPTYGLIFLFKWRQG 59
Query: 61 TEPAGSIVQDSRLETIFFAKQVVNNACATQAILSILLNNSDPEVKLGSVLTEFKDFCQSF 120
E G I D + IFFA Q + NACATQA++++L+N D +VKLG++L ++K+F
Sbjct: 60 DETTG-IPSDK--QNIFFAHQTIQNACATQALINLLMNVEDTDVKLGNILNQYKEFAIDL 116
Query: 121 DPTMKGYALSNSQPIRTVHNSFARYS---------SEEIRFNLLAVVCDKKMKYE----K 167
DP +G+ LSNS+ IRTVHNSF+R + E ++ + V YE +
Sbjct: 117 DPNTRGHCLSNSEEIRTVHNSFSRQTLFELDIKGGESEDNYHFVTYVPIGNKVYELDGLR 176
Query: 168 EL---AAATQALKD------PSLDAATKTAKQNEVV-QLKILI----------------- 200
EL A Q +D P + + + E+ L L+
Sbjct: 177 ELPLEVAEFQKEQDWIEAIKPVIQQRMQKYSEGEITFNLMALVPNRKQKLQEMMENLIQA 236
Query: 201 ------EEEAAKL------ESYRIE-----NIRRKHNYLPLIMNLLKLLAKQGQLVNLYQ 243
EE+ A L E Y++E N RR+HNY P ++ L+K+LAK+G+LV L
Sbjct: 237 NENNELEEQIADLNKAIADEDYKMEMYRKENNRRRHNYTPFVIELMKILAKEGKLVGLVD 296
Query: 244 KAVELNSSKKEKVK 257
A + + KEK K
Sbjct: 297 NAYQ---AAKEKSK 307
>sp|Q9UUB6|UBLH2_SCHPO Ubiquitin carboxyl-terminal hydrolase 2 OS=Schizosaccharomyces
pombe (strain 972 / ATCC 24843) GN=uch2 PE=1 SV=1
Length = 300
Score = 165 bits (417), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 110/294 (37%), Positives = 163/294 (55%), Gaps = 49/294 (16%)
Query: 6 NWCLIESDPGVFTELIRGFGVQGVQVEELWSLEPENLKILQPVHGLIFLFKLREDTE-PA 64
+W IESD GVFT+LI GV+ V+V+EL+SL+ ++L+ ++G+IFLFK + P
Sbjct: 2 SWTTIESDAGVFTDLIENLGVKDVEVDELYSLDVDSLRQFPDIYGIIFLFKWNSKVDKPD 61
Query: 65 GSIVQDSRLETIFFAKQVVNNACATQAILSILLNNSDPEVKLGSVLTEFKDFCQSFDPTM 124
G++ DS ++ IFFAKQV+NNACATQA+LS+LLN+SD E+ LG+ L+EFKDF ++ P +
Sbjct: 62 GTMDYDS-MDNIFFAKQVINNACATQALLSVLLNHSD-EIDLGTTLSEFKDFSKTLPPEL 119
Query: 125 KGYALSNSQPIRTVHNSFAR---YSSEEIR--------FNLLAVV--------------- 158
KG AL NS+ IR HNSFAR + SEE+R ++ +A
Sbjct: 120 KGEALGNSEHIRCCHNSFARSDPFISEEVRAATDEDEVYHFIAYTNINNVFYELDGLQAA 179
Query: 159 ------CDKKMKYEKELAA--ATQALKDPS-----LDAATKTAKQNEVVQLKILIEEEAA 205
C K+ EK ++ A A DP+ L K K + + + + EE+AA
Sbjct: 180 PINHGSCTKEEFAEKAVSVIQARIANYDPAEIRFNLMVICKDKKASLLTREDLTDEEKAA 239
Query: 206 KLE-------SYRIENIRRKHNYLPLIMNLLKLLAKQGQLVNLYQKAVELNSSK 252
+ ++ EN R+HN++ L + L KLL K N + +E +K
Sbjct: 240 SIAVEDEKRLRWKRENQLRRHNFVGLFVELSKLLVKDRIDKNTWNSTLETAKAK 293
>sp|Q54N38|UCHL5_DICDI Ubiquitin carboxyl-terminal hydrolase isozyme L5 OS=Dictyostelium
discoideum GN=uch2 PE=3 SV=1
Length = 343
Score = 143 bits (360), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 75/143 (52%), Positives = 95/143 (66%), Gaps = 6/143 (4%)
Query: 1 MSDAGNWCLIESDPGVFTELIRGFGVQGVQVEELWSLEPENLKILQPVHGLIFLFKLRED 60
MS+ WC IESDPGVFTELI GV+ +QVEEL++L+ L+PV GLIFLFK ++
Sbjct: 1 MSENEGWCTIESDPGVFTELITKIGVKDIQVEELYTLDSSEYDRLKPVLGLIFLFKWEKE 60
Query: 61 TEPAGSIVQDSRLETIFFAKQVVNNACATQAILSILLNNSDPEVKLGSVLTEFKDFCQSF 120
E + D+ E IFFA QV+ NACATQAILS+LLN+ ++LG L+ FK F F
Sbjct: 61 EE--NRTISDN--ENIFFANQVIQNACATQAILSVLLNSEG--IELGEELSNFKSFVGDF 114
Query: 121 DPTMKGYALSNSQPIRTVHNSFA 143
P MKG A+ NS+ I+ HNSF
Sbjct: 115 PPMMKGEAIGNSELIKETHNSFT 137
Score = 63.2 bits (152), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 46/149 (30%), Positives = 74/149 (49%), Gaps = 31/149 (20%)
Query: 138 VHNSFARYSSEEIRFNLLAVVCDKKMKYEK-----------------ELAAATQALKDPS 180
+ +YS EIRFNL+AV+ +++ ++ EL + +
Sbjct: 197 IQKRMEKYSQGEIRFNLMAVIKNRQTTLQEKILTLEKKKNDLEIKLSELNSGSGGDNKEE 256
Query: 181 LDAATKTAKQN------------EVVQLKILIEEEAAKLESYRIENIRRKHNYLPLIMNL 228
AT T K++ E +IL+E+E K +++ ENIRRKHN+ PLI+NL
Sbjct: 257 SGGATPTTKEDLNFMINVVNNDIEEANNEILMEQE--KFRNWKDENIRRKHNFTPLILNL 314
Query: 229 LKLLAKQGQLVNLYQKAVELNSSKKEKVK 257
+K LA++ L L QKA + S K+++ K
Sbjct: 315 IKGLAEKDNLQPLIQKAKDQISQKQQQHK 343
>sp|D3ZHS6|BAP1_RAT Ubiquitin carboxyl-terminal hydrolase BAP1 OS=Rattus norvegicus
GN=Bap1 PE=3 SV=2
Length = 727
Score = 125 bits (315), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 67/152 (44%), Positives = 92/152 (60%), Gaps = 22/152 (14%)
Query: 6 NWCLIESDPGVFTELIRGFGVQGVQVEELWSLEPENLKILQPVHGLIFLFK--------- 56
W +ESDPG+FT L+ FGV+GVQVEE++ L+ K PV+G IFLFK
Sbjct: 4 GWLELESDPGLFTLLVEDFGVKGVQVEEIYDLQ---SKCQGPVYGFIFLFKWIEERRSRR 60
Query: 57 ----LREDTEPAGSIVQDSRLETIFFAKQVVNNACATQAILSILLNNSDPEVKLGSVLTE 112
L +DT S++ D + ++FFA Q++ N+CAT A+LS+LLN S+ V LG L+
Sbjct: 61 KVSTLVDDT----SVIDDDIVNSMFFAHQLIPNSCATHALLSVLLNCSN--VDLGPTLSR 114
Query: 113 FKDFCQSFDPTMKGYALSNSQPIRTVHNSFAR 144
KDF + F P KGYA+ N+ + HNS AR
Sbjct: 115 MKDFTKGFSPESKGYAIGNAPELAKAHNSHAR 146
Score = 42.0 bits (97), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 17/57 (29%), Positives = 34/57 (59%)
Query: 192 EVVQLKILIEEEAAKLESYRIENIRRKHNYLPLIMNLLKLLAKQGQLVNLYQKAVEL 248
E+ + ++EE K + ++I++ RR HNY I + +LA++G L NL ++ + +
Sbjct: 640 EIANYEACLKEEVEKRKKFKIDDQRRTHNYDEFICTFISMLAQEGMLANLVEQNISV 696
Score = 33.9 bits (76), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 13/22 (59%), Positives = 18/22 (81%)
Query: 148 EEIRFNLLAVVCDKKMKYEKEL 169
+IRFNL+AVV D+++KYE L
Sbjct: 224 HDIRFNLMAVVPDRRVKYEARL 245
>sp|A2VDM8|BAP1_BOVIN Ubiquitin carboxyl-terminal hydrolase BAP1 OS=Bos taurus GN=BAP1
PE=2 SV=1
Length = 711
Score = 125 bits (314), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 67/152 (44%), Positives = 91/152 (59%), Gaps = 22/152 (14%)
Query: 6 NWCLIESDPGVFTELIRGFGVQGVQVEELWSLEPENLKILQPVHGLIFLFK--------- 56
W +ESDPG+FT L+ FGV+GVQVEE++ L+ K PV+G IFLFK
Sbjct: 4 GWLELESDPGLFTLLVEDFGVKGVQVEEIYDLQ---SKCQGPVYGFIFLFKWIEERRSRR 60
Query: 57 ----LREDTEPAGSIVQDSRLETIFFAKQVVNNACATQAILSILLNNSDPEVKLGSVLTE 112
L +DT S++ D + +FFA Q++ N+CAT A+LS+LLN S+ V LG L+
Sbjct: 61 KVSTLVDDT----SVIDDDIVNNMFFAHQLIPNSCATHALLSVLLNCSN--VDLGPTLSR 114
Query: 113 FKDFCQSFDPTMKGYALSNSQPIRTVHNSFAR 144
KDF + F P KGYA+ N+ + HNS AR
Sbjct: 115 MKDFTKGFSPESKGYAIGNAPELAKAHNSHAR 146
Score = 41.6 bits (96), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 17/57 (29%), Positives = 34/57 (59%)
Query: 192 EVVQLKILIEEEAAKLESYRIENIRRKHNYLPLIMNLLKLLAKQGQLVNLYQKAVEL 248
E+ + ++EE K + ++I++ RR HNY I + +LA++G L NL ++ + +
Sbjct: 624 EIANYEACLKEEVEKRKKFKIDDQRRTHNYDEFICTFISMLAQEGMLANLVEQNISV 680
>sp|Q99PU7|BAP1_MOUSE Ubiquitin carboxyl-terminal hydrolase BAP1 OS=Mus musculus GN=Bap1
PE=1 SV=1
Length = 728
Score = 125 bits (313), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 67/152 (44%), Positives = 91/152 (59%), Gaps = 22/152 (14%)
Query: 6 NWCLIESDPGVFTELIRGFGVQGVQVEELWSLEPENLKILQPVHGLIFLFK--------- 56
W +ESDPG+FT L+ FGV+GVQVEE++ L+ K PV+G IFLFK
Sbjct: 4 GWLELESDPGLFTLLVEDFGVKGVQVEEIYDLQ---SKCQGPVYGFIFLFKWIEERRSRR 60
Query: 57 ----LREDTEPAGSIVQDSRLETIFFAKQVVNNACATQAILSILLNNSDPEVKLGSVLTE 112
L +DT S++ D + +FFA Q++ N+CAT A+LS+LLN S+ V LG L+
Sbjct: 61 KVSTLVDDT----SVIDDDIVNNMFFAHQLIPNSCATHALLSVLLNCSN--VDLGPTLSR 114
Query: 113 FKDFCQSFDPTMKGYALSNSQPIRTVHNSFAR 144
KDF + F P KGYA+ N+ + HNS AR
Sbjct: 115 MKDFTKGFSPESKGYAIGNAPELAKAHNSHAR 146
Score = 42.0 bits (97), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 17/57 (29%), Positives = 34/57 (59%)
Query: 192 EVVQLKILIEEEAAKLESYRIENIRRKHNYLPLIMNLLKLLAKQGQLVNLYQKAVEL 248
E+ + ++EE K + ++I++ RR HNY I + +LA++G L NL ++ + +
Sbjct: 641 EIANYEACLKEEVEKRKKFKIDDQRRTHNYDEFICTFISMLAQEGMLANLVEQNISV 697
Score = 33.9 bits (76), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 13/22 (59%), Positives = 18/22 (81%)
Query: 148 EEIRFNLLAVVCDKKMKYEKEL 169
+IRFNL+AVV D+++KYE L
Sbjct: 224 HDIRFNLMAVVPDRRIKYETRL 245
>sp|Q92560|BAP1_HUMAN Ubiquitin carboxyl-terminal hydrolase BAP1 OS=Homo sapiens GN=BAP1
PE=1 SV=2
Length = 729
Score = 124 bits (312), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 67/152 (44%), Positives = 90/152 (59%), Gaps = 22/152 (14%)
Query: 6 NWCLIESDPGVFTELIRGFGVQGVQVEELWSLEPENLKILQPVHGLIFLFK--------- 56
W +ESDPG+FT L+ FGV+GVQVEE++ L+ K PV+G IFLFK
Sbjct: 4 GWLELESDPGLFTLLVEDFGVKGVQVEEIYDLQ---SKCQGPVYGFIFLFKWIEERRSRR 60
Query: 57 ----LREDTEPAGSIVQDSRLETIFFAKQVVNNACATQAILSILLNNSDPEVKLGSVLTE 112
L +DT S++ D + +FFA Q++ N+CAT A+LS+LLN S V LG L+
Sbjct: 61 KVSTLVDDT----SVIDDDIVNNMFFAHQLIPNSCATHALLSVLLNCSS--VDLGPTLSR 114
Query: 113 FKDFCQSFDPTMKGYALSNSQPIRTVHNSFAR 144
KDF + F P KGYA+ N+ + HNS AR
Sbjct: 115 MKDFTKGFSPESKGYAIGNAPELAKAHNSHAR 146
Score = 41.6 bits (96), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 17/57 (29%), Positives = 34/57 (59%)
Query: 192 EVVQLKILIEEEAAKLESYRIENIRRKHNYLPLIMNLLKLLAKQGQLVNLYQKAVEL 248
E+ + ++EE K + ++I++ RR HNY I + +LA++G L NL ++ + +
Sbjct: 642 EIANYEACLKEEVEKRKKFKIDDQRRTHNYDEFICTFISMLAQEGMLANLVEQNISV 698
Score = 33.9 bits (76), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 13/22 (59%), Positives = 18/22 (81%)
Query: 148 EEIRFNLLAVVCDKKMKYEKEL 169
+IRFNL+AVV D+++KYE L
Sbjct: 224 HDIRFNLMAVVPDRRIKYEARL 245
>sp|Q66JB6|BAP1_XENTR Ubiquitin carboxyl-terminal hydrolase BAP1 OS=Xenopus tropicalis
GN=bap1 PE=2 SV=1
Length = 685
Score = 123 bits (308), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 66/152 (43%), Positives = 91/152 (59%), Gaps = 22/152 (14%)
Query: 6 NWCLIESDPGVFTELIRGFGVQGVQVEELWSLEPENLKILQPVHGLIFLFK--------- 56
W +ESDPG+FT L+ FGV+GVQVEE++ L+ K PV+G IFLFK
Sbjct: 4 GWLELESDPGLFTLLVEDFGVKGVQVEEIYDLQ---SKCPGPVYGFIFLFKWIEERRSRR 60
Query: 57 ----LREDTEPAGSIVQDSRLETIFFAKQVVNNACATQAILSILLNNSDPEVKLGSVLTE 112
L +DT S+++D + +FFA Q++ N+CAT A+LS+LLN S V LG L+
Sbjct: 61 KVSTLLDDT----SVMEDEVVNNMFFAHQLIPNSCATHALLSVLLNCSG--VHLGPTLSR 114
Query: 113 FKDFCQSFDPTMKGYALSNSQPIRTVHNSFAR 144
K+F + F P KGYA+ N+ + HNS AR
Sbjct: 115 IKEFTKGFSPESKGYAIGNAPELAKAHNSHAR 146
Score = 34.3 bits (77), Expect = 0.83, Method: Compositional matrix adjust.
Identities = 13/22 (59%), Positives = 19/22 (86%)
Query: 148 EEIRFNLLAVVCDKKMKYEKEL 169
+IRFNL+AVV D+++KYE +L
Sbjct: 224 HDIRFNLMAVVPDRRLKYESKL 245
>sp|A1L2G3|BAP1_DANRE Ubiquitin carboxyl-terminal hydrolase BAP1 OS=Danio rerio GN=bap1
PE=2 SV=2
Length = 755
Score = 122 bits (305), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 64/148 (43%), Positives = 89/148 (60%), Gaps = 14/148 (9%)
Query: 6 NWCLIESDPGVFTELIRGFGVQGVQVEELWSLEPENLKILQPVHGLIFLFKLREDTEP-- 63
W +ESDPG+FT L+ FGV+GVQVEE++ L+ K PV+G IFLFK E+
Sbjct: 4 GWLELESDPGLFTLLVEDFGVKGVQVEEIYDLQ---SKCQSPVYGFIFLFKWIEERRSRR 60
Query: 64 -------AGSIVQDSRLETIFFAKQVVNNACATQAILSILLNNSDPEVKLGSVLTEFKDF 116
S++ D + +FFA Q++ N+CAT A+LS+LLN S V+LG L+ K F
Sbjct: 61 KVSTLVDETSVIDDDIVNDMFFAHQLIPNSCATHALLSVLLNCSG--VELGMTLSRMKAF 118
Query: 117 CQSFDPTMKGYALSNSQPIRTVHNSFAR 144
+ F+P KGYA+ N+ + HNS AR
Sbjct: 119 TKGFNPESKGYAIGNAPELAKAHNSHAR 146
Score = 41.6 bits (96), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 16/57 (28%), Positives = 35/57 (61%)
Query: 192 EVVQLKILIEEEAAKLESYRIENIRRKHNYLPLIMNLLKLLAKQGQLVNLYQKAVEL 248
++ ++ ++EE K + Y+I++ RR HNY I + +LA++G L +L ++ + +
Sbjct: 668 DIANYEVYLKEEVEKRKKYKIDDQRRTHNYDEFICTFISMLAQEGMLASLVEQNISV 724
Score = 34.3 bits (77), Expect = 1.00, Method: Compositional matrix adjust.
Identities = 13/21 (61%), Positives = 19/21 (90%)
Query: 149 EIRFNLLAVVCDKKMKYEKEL 169
+IRFNL+AVV D+++KYE +L
Sbjct: 225 DIRFNLMAVVPDRRIKYESKL 245
>sp|Q52L14|BAP1_XENLA Ubiquitin carboxyl-terminal hydrolase BAP1 OS=Xenopus laevis
GN=bap1 PE=2 SV=1
Length = 618
Score = 121 bits (303), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 65/152 (42%), Positives = 90/152 (59%), Gaps = 22/152 (14%)
Query: 6 NWCLIESDPGVFTELIRGFGVQGVQVEELWSLEPENLKILQPVHGLIFLFK--------- 56
W +ESDPG+FT L+ FGV+GVQVEE++ L+ K PV+G IFLFK
Sbjct: 4 GWLELESDPGLFTLLVEDFGVKGVQVEEIYDLQ---SKCPGPVYGFIFLFKWIEERRSRR 60
Query: 57 ----LREDTEPAGSIVQDSRLETIFFAKQVVNNACATQAILSILLNNSDPEVKLGSVLTE 112
L +DT S+++D + +FFA Q++ N+CAT A+LS+LLN V LG L+
Sbjct: 61 KVSTLLDDT----SVMEDEVVNNMFFAHQLIPNSCATHALLSVLLNCGG--VHLGPTLSR 114
Query: 113 FKDFCQSFDPTMKGYALSNSQPIRTVHNSFAR 144
K+F + F P KGYA+ N+ + HNS AR
Sbjct: 115 IKEFTKGFSPESKGYAIGNAPELAKAHNSHAR 146
Score = 34.3 bits (77), Expect = 0.86, Method: Compositional matrix adjust.
Identities = 13/21 (61%), Positives = 19/21 (90%)
Query: 149 EIRFNLLAVVCDKKMKYEKEL 169
+IRFNL+AVV D+++KYE +L
Sbjct: 225 DIRFNLMAVVPDRRLKYEGKL 245
>sp|Q5F3N6|BAP1_CHICK Ubiquitin carboxyl-terminal hydrolase BAP1 OS=Gallus gallus GN=BAP1
PE=2 SV=1
Length = 700
Score = 120 bits (302), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 63/148 (42%), Positives = 89/148 (60%), Gaps = 14/148 (9%)
Query: 6 NWCLIESDPGVFTELIRGFGVQGVQVEELWSLEPENLKILQPVHGLIFLFKLREDTEP-- 63
W +ESDPG+FT L+ FGV+GVQVEE++ L+ K PV+G IFLFK E++
Sbjct: 4 GWLELESDPGLFTLLVEDFGVKGVQVEEIYDLQ---SKCQGPVYGFIFLFKWIEESRSRR 60
Query: 64 -------AGSIVQDSRLETIFFAKQVVNNACATQAILSILLNNSDPEVKLGSVLTEFKDF 116
S++ D + +FFA Q++ N+CAT A+LS+LLN ++ V LG L+ KDF
Sbjct: 61 KVSTLVDETSVIDDDIVNNMFFAHQLIPNSCATHALLSVLLNCNN--VDLGPTLSRMKDF 118
Query: 117 CQSFDPTMKGYALSNSQPIRTVHNSFAR 144
+ F P KGYA+ N+ + NS AR
Sbjct: 119 TKGFSPESKGYAIGNAPELAKARNSHAR 146
Score = 39.7 bits (91), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 16/57 (28%), Positives = 34/57 (59%)
Query: 192 EVVQLKILIEEEAAKLESYRIENIRRKHNYLPLIMNLLKLLAKQGQLVNLYQKAVEL 248
E+ + ++EE K + ++I++ RR HNY I + +LA++G L +L ++ + +
Sbjct: 613 EIANYEACLKEEVEKRKKFKIDDQRRTHNYDEFICTFISMLAQEGMLASLVEQNISV 669
Score = 36.2 bits (82), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 14/22 (63%), Positives = 19/22 (86%)
Query: 148 EEIRFNLLAVVCDKKMKYEKEL 169
+IRFNL+AVV D++MKYE +L
Sbjct: 224 HDIRFNLMAVVPDRRMKYESKL 245
>sp|C4A0D9|BAP1_BRAFL Ubiquitin carboxyl-terminal hydrolase BAP1 OS=Branchiostoma
floridae GN=BAP1 PE=3 SV=1
Length = 694
Score = 116 bits (291), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 64/148 (43%), Positives = 89/148 (60%), Gaps = 14/148 (9%)
Query: 6 NWCLIESDPGVFTELIRGFGVQGVQVEELWSLEPENLKILQPVHGLIFLFKLREDTE--- 62
W +ESDPG+FT L+ FGV+GVQVEE++ L + I PV+G IFLFK E+
Sbjct: 4 GWLELESDPGLFTLLVEDFGVKGVQVEEIYDL---SKPIEGPVYGFIFLFKWSEERRSRR 60
Query: 63 ---PA---GSIVQDSRLETIFFAKQVVNNACATQAILSILLNNSDPEVKLGSVLTEFKDF 116
P+ +V + + +FFA+Q++ N+CAT A+LS+LLN P++ LGS LT K F
Sbjct: 61 KVGPSMEESFVVDEDIVNDMFFAQQLIPNSCATHALLSVLLNC--PQISLGSTLTRLKYF 118
Query: 117 CQSFDPTMKGYALSNSQPIRTVHNSFAR 144
+ P KG+A+ N I HNS AR
Sbjct: 119 TRGMGPESKGWAIGNVPEIARAHNSHAR 146
Score = 42.7 bits (99), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 18/47 (38%), Positives = 30/47 (63%)
Query: 200 IEEEAAKLESYRIENIRRKHNYLPLIMNLLKLLAKQGQLVNLYQKAV 246
+++E K + Y++++ RR HNY I L++LA+QGQL L + V
Sbjct: 611 LKDEIEKRKKYKVDDCRRTHNYDDFIRTFLRMLAEQGQLSKLVDQHV 657
Score = 33.9 bits (76), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 13/32 (40%), Positives = 22/32 (68%)
Query: 138 VHNSFARYSSEEIRFNLLAVVCDKKMKYEKEL 169
+ N+ + +IRFNL+AVV D++ +YE +L
Sbjct: 214 IGNATGGENGHDIRFNLMAVVADRRQQYETKL 245
>sp|Q17N72|CALYP_AEDAE Ubiquitin carboxyl-terminal hydrolase calypso OS=Aedes aegypti
GN=calypso PE=3 SV=1
Length = 478
Score = 113 bits (282), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 62/145 (42%), Positives = 87/145 (60%), Gaps = 13/145 (8%)
Query: 7 WCLIESDPGVFTELIRGFGVQGVQVEELWSLEPENLKILQPVHGLIFLFKLREDTEPAGS 66
W +ESDPG+FT L+ FGV+GVQVEE++ L+ I PV+G IFLF+ E+
Sbjct: 12 WLELESDPGLFTLLLEDFGVKGVQVEEIYDLQK---NIEGPVYGFIFLFRWIEERRARRK 68
Query: 67 IVQDSRL--------ETIFFAKQVVNNACATQAILSILLNNSDPEVKLGSVLTEFKDFCQ 118
IV+ + + IFFA+QVV N+CAT A+LS+LLN SD + LG+ L+ K +
Sbjct: 69 IVETTEIYVKDEEAVNNIFFAQQVVPNSCATHALLSVLLNCSD--IDLGNTLSRLKVHTK 126
Query: 119 SFDPTMKGYALSNSQPIRTVHNSFA 143
P KG+A+ N+ + HNS A
Sbjct: 127 GMCPENKGWAIGNTPELACAHNSHA 151
Score = 35.8 bits (81), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 16/48 (33%), Positives = 27/48 (56%)
Query: 202 EEAAKLESYRIENIRRKHNYLPLIMNLLKLLAKQGQLVNLYQKAVELN 249
+E K +++++ RR HNY I L +LA QG+L +L + + N
Sbjct: 382 DENEKRAMFKVDDCRRTHNYDEFICTFLSMLAHQGELGDLVSQHLITN 429
>sp|B0W2R4|CALYP_CULQU Ubiquitin carboxyl-terminal hydrolase calypso OS=Culex
quinquefasciatus GN=calypso PE=3 SV=1
Length = 470
Score = 111 bits (277), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 62/147 (42%), Positives = 86/147 (58%), Gaps = 14/147 (9%)
Query: 6 NWCLIESDPGVFTELIRGFGVQGVQVEELWSLEPENLKILQPVHGLIFLFKLREDTEPAG 65
W +ESDPG+FT L+ FGV+GVQVEE++ L+ I PV G IFLF+ E+
Sbjct: 11 GWLELESDPGLFTLLLEDFGVKGVQVEEIYDLQK---TIEGPVFGFIFLFRWIEERRARR 67
Query: 66 SIVQDSR---------LETIFFAKQVVNNACATQAILSILLNNSDPEVKLGSVLTEFKDF 116
IV+ + + +IFFA QVV N+CAT A+LS+LLN SD + LG+ L+ K
Sbjct: 68 KIVETTTEMYVKDEEAVNSIFFAHQVVPNSCATHALLSVLLNCSD--IDLGTTLSRLKVH 125
Query: 117 CQSFDPTMKGYALSNSQPIRTVHNSFA 143
+ P KG+A+ N+ + HNS A
Sbjct: 126 TKGMCPDNKGWAIGNTPELACAHNSHA 152
Score = 35.4 bits (80), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 15/40 (37%), Positives = 24/40 (60%)
Query: 202 EEAAKLESYRIENIRRKHNYLPLIMNLLKLLAKQGQLVNL 241
+E K +++++ RR HNY I L +LA QG+L +L
Sbjct: 374 DENEKRAMFKVDDCRRTHNYDEFICTFLSMLAYQGELGDL 413
>sp|B4QHH0|CALYP_DROSI Ubiquitin carboxyl-terminal hydrolase calypso OS=Drosophila
simulans GN=calypso PE=3 SV=1
Length = 471
Score = 106 bits (264), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 57/149 (38%), Positives = 86/149 (57%), Gaps = 13/149 (8%)
Query: 4 AGNWCLIESDPGVFTELIRGFGVQGVQVEELWSLEPENLKILQPVHGLIFLFKLREDTEP 63
A W +ESDPG+FT L++ FG VQVEE++ L+ K ++ +G IFLF+ E+
Sbjct: 43 ADGWLELESDPGLFTLLLKDFGCHDVQVEEVYDLQ----KPIESPYGFIFLFRWIEERRA 98
Query: 64 AGSIVQ---------DSRLETIFFAKQVVNNACATQAILSILLNNSDPEVKLGSVLTEFK 114
IV+ + + +IFFA+QVV N+CAT A+LS+LLN ++ ++LG L+ K
Sbjct: 99 RRKIVETTAEIFVKDEEAISSIFFAQQVVPNSCATHALLSVLLNCNENNLQLGDTLSRLK 158
Query: 115 DFCQSFDPTMKGYALSNSQPIRTVHNSFA 143
+ P KG A+ N+ + HNS A
Sbjct: 159 THTKGMSPENKGLAIGNTPELACAHNSHA 187
>sp|Q7K5N4|CALYP_DROME Ubiquitin carboxyl-terminal hydrolase calypso OS=Drosophila
melanogaster GN=calypso PE=1 SV=1
Length = 471
Score = 106 bits (264), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 57/149 (38%), Positives = 86/149 (57%), Gaps = 13/149 (8%)
Query: 4 AGNWCLIESDPGVFTELIRGFGVQGVQVEELWSLEPENLKILQPVHGLIFLFKLREDTEP 63
A W +ESDPG+FT L++ FG VQVEE++ L+ K ++ +G IFLF+ E+
Sbjct: 43 ADGWLELESDPGLFTLLLKDFGCHDVQVEEVYDLQ----KPIESPYGFIFLFRWIEERRA 98
Query: 64 AGSIVQ---------DSRLETIFFAKQVVNNACATQAILSILLNNSDPEVKLGSVLTEFK 114
IV+ + + +IFFA+QVV N+CAT A+LS+LLN ++ ++LG L+ K
Sbjct: 99 RRKIVETTAEIFVKDEEAISSIFFAQQVVPNSCATHALLSVLLNCNENNLQLGDTLSRLK 158
Query: 115 DFCQSFDPTMKGYALSNSQPIRTVHNSFA 143
+ P KG A+ N+ + HNS A
Sbjct: 159 THTKGMSPENKGLAIGNTPELACAHNSHA 187
>sp|B4HST0|CALYP_DROSE Ubiquitin carboxyl-terminal hydrolase calypso OS=Drosophila
sechellia GN=calypso PE=3 SV=1
Length = 471
Score = 106 bits (264), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 57/149 (38%), Positives = 86/149 (57%), Gaps = 13/149 (8%)
Query: 4 AGNWCLIESDPGVFTELIRGFGVQGVQVEELWSLEPENLKILQPVHGLIFLFKLREDTEP 63
A W +ESDPG+FT L++ FG VQVEE++ L+ K ++ +G IFLF+ E+
Sbjct: 43 ADGWLELESDPGLFTLLLKDFGCHDVQVEEVYDLQ----KPIESPYGFIFLFRWIEERRA 98
Query: 64 AGSIVQ---------DSRLETIFFAKQVVNNACATQAILSILLNNSDPEVKLGSVLTEFK 114
IV+ + + +IFFA+QVV N+CAT A+LS+LLN ++ ++LG L+ K
Sbjct: 99 RRKIVETTAEIFVKDEEAISSIFFAQQVVPNSCATHALLSVLLNCNENNLQLGDTLSRLK 158
Query: 115 DFCQSFDPTMKGYALSNSQPIRTVHNSFA 143
+ P KG A+ N+ + HNS A
Sbjct: 159 THTKGMSPENKGLAIGNTPELACAHNSHA 187
>sp|B4P6P6|CALYP_DROYA Ubiquitin carboxyl-terminal hydrolase calypso OS=Drosophila yakuba
GN=calypso PE=3 SV=1
Length = 471
Score = 105 bits (263), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 57/149 (38%), Positives = 86/149 (57%), Gaps = 13/149 (8%)
Query: 4 AGNWCLIESDPGVFTELIRGFGVQGVQVEELWSLEPENLKILQPVHGLIFLFKLREDTEP 63
A W +ESDPG+FT L++ FG VQVEE++ L+ K ++ +G IFLF+ E+
Sbjct: 43 ADGWLELESDPGLFTLLLKDFGCHDVQVEEVYDLQ----KPIESPYGFIFLFRWIEERRA 98
Query: 64 AGSIVQDSR---------LETIFFAKQVVNNACATQAILSILLNNSDPEVKLGSVLTEFK 114
IV+ + + +IFFA+QVV N+CAT A+LS+LLN ++ ++LG L+ K
Sbjct: 99 RRKIVETTAEIFVKDEEAISSIFFAQQVVPNSCATHALLSVLLNCNENNLQLGDTLSRLK 158
Query: 115 DFCQSFDPTMKGYALSNSQPIRTVHNSFA 143
+ P KG A+ N+ + HNS A
Sbjct: 159 AHTKGMSPENKGLAIGNTPELACAHNSHA 187
>sp|B4LQ24|CALYP_DROVI Ubiquitin carboxyl-terminal hydrolase calypso OS=Drosophila virilis
GN=calypso PE=3 SV=1
Length = 462
Score = 105 bits (261), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 57/149 (38%), Positives = 85/149 (57%), Gaps = 13/149 (8%)
Query: 4 AGNWCLIESDPGVFTELIRGFGVQGVQVEELWSLEPENLKILQPVHGLIFLFKLREDTEP 63
A W +ESDPG+FT L+ FG VQVEE++ L+ K ++ +G IFLF+ E+
Sbjct: 27 ADGWLELESDPGLFTLLLEDFGCHDVQVEEVYDLQ----KPIESPYGFIFLFRWIEERRA 82
Query: 64 AGSIVQ---------DSRLETIFFAKQVVNNACATQAILSILLNNSDPEVKLGSVLTEFK 114
IV+ + + +IFFA+QVV N+CAT A+LS+LLN ++ ++LG L+ K
Sbjct: 83 RRKIVETTAEIFVKDEEAISSIFFAQQVVPNSCATHALLSVLLNCNENNLQLGETLSRLK 142
Query: 115 DFCQSFDPTMKGYALSNSQPIRTVHNSFA 143
+ P KG A+ N+ + HNS A
Sbjct: 143 AHTKGMSPENKGLAIGNTPELACAHNSHA 171
>sp|B3NPV7|CALYP_DROER Ubiquitin carboxyl-terminal hydrolase calypso OS=Drosophila erecta
GN=calypso PE=3 SV=1
Length = 471
Score = 105 bits (261), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 57/149 (38%), Positives = 86/149 (57%), Gaps = 13/149 (8%)
Query: 4 AGNWCLIESDPGVFTELIRGFGVQGVQVEELWSLEPENLKILQPVHGLIFLFKLREDTEP 63
A W +ESDPG+FT L++ FG VQVEE++ L+ K ++ +G IFLF+ E+
Sbjct: 43 ADGWLELESDPGLFTLLLKDFGCHDVQVEEVYDLQ----KPIESPYGFIFLFRWIEERRA 98
Query: 64 AGSIVQ---------DSRLETIFFAKQVVNNACATQAILSILLNNSDPEVKLGSVLTEFK 114
IV+ + + +IFFA+QVV N+CAT A+LS+LLN ++ ++LG L+ K
Sbjct: 99 RRKIVETTAEIFVKDEEAISSIFFAQQVVPNSCATHALLSVLLNCNENNLQLGDTLSRLK 158
Query: 115 DFCQSFDPTMKGYALSNSQPIRTVHNSFA 143
+ P KG A+ N+ + HNS A
Sbjct: 159 VHTKGMSPENKGLAIGNTPELACAHNSHA 187
>sp|B3MIV9|CALYP_DROAN Ubiquitin carboxyl-terminal hydrolase calypso OS=Drosophila
ananassae GN=calypso PE=3 SV=1
Length = 470
Score = 105 bits (261), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 57/149 (38%), Positives = 85/149 (57%), Gaps = 13/149 (8%)
Query: 4 AGNWCLIESDPGVFTELIRGFGVQGVQVEELWSLEPENLKILQPVHGLIFLFKLREDTEP 63
A W +ESDPG+FT L+ FG VQVEE++ L+ K ++ +G IFLF+ E+
Sbjct: 41 ADGWLELESDPGLFTLLLEDFGCHDVQVEEVYDLQ----KPIESPYGFIFLFRWIEERRA 96
Query: 64 AGSIVQ---------DSRLETIFFAKQVVNNACATQAILSILLNNSDPEVKLGSVLTEFK 114
IV+ + + +IFFA+QVV N+CAT A+LS+LLN ++ ++LG L+ K
Sbjct: 97 RRKIVETTAEIFVKDEEAISSIFFAQQVVPNSCATHALLSVLLNCNENNLQLGDTLSRLK 156
Query: 115 DFCQSFDPTMKGYALSNSQPIRTVHNSFA 143
+ P KG A+ N+ + HNS A
Sbjct: 157 AHTKGMSPENKGLAIGNTPELACAHNSHA 185
>sp|B4KT51|CALYP_DROMO Ubiquitin carboxyl-terminal hydrolase calypso OS=Drosophila
mojavensis GN=calypso PE=3 SV=1
Length = 461
Score = 105 bits (261), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 57/149 (38%), Positives = 85/149 (57%), Gaps = 13/149 (8%)
Query: 4 AGNWCLIESDPGVFTELIRGFGVQGVQVEELWSLEPENLKILQPVHGLIFLFKLREDTEP 63
A W +ESDPG+FT L+ FG VQVEE++ L+ K ++ +G IFLF+ E+
Sbjct: 27 ADGWLELESDPGLFTLLLEDFGCHDVQVEEVYDLQ----KPIESPYGFIFLFRWIEERRA 82
Query: 64 AGSIVQ---------DSRLETIFFAKQVVNNACATQAILSILLNNSDPEVKLGSVLTEFK 114
IV+ + + +IFFA+QVV N+CAT A+LS+LLN ++ ++LG L+ K
Sbjct: 83 RRKIVETTAEIFVKDEEAISSIFFAQQVVPNSCATHALLSVLLNCNENNLQLGETLSRLK 142
Query: 115 DFCQSFDPTMKGYALSNSQPIRTVHNSFA 143
+ P KG A+ N+ + HNS A
Sbjct: 143 AHTKGMSPENKGLAIGNTPELACAHNSHA 171
Score = 35.8 bits (81), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 32/128 (25%), Positives = 55/128 (42%), Gaps = 34/128 (26%)
Query: 148 EEIRFNLLAVVCDKK--MKYEKELAAATQALKDPSLDAATKTAKQNEVVQ---------- 195
++IRFNL+AVV D++ + ++ ++ QA+ +L K +Q + Q
Sbjct: 249 QDIRFNLMAVVPDRRIAITHKLKMLRTNQAIVSGTLQKLLKADEQGDDQQRPDTPNTLLE 308
Query: 196 ------------LKIL----------IEEEAAKLESYRIENIRRKHNYLPLIMNLLKLLA 233
LK L + +E + + ++++ RR HNY I L +LA
Sbjct: 309 PSAFTARDLQSLLKNLDTEIAINEQHLADENDRRQMFKVDASRRTHNYDKFICTFLSMLA 368
Query: 234 KQGQLVNL 241
QG L L
Sbjct: 369 HQGVLGEL 376
>sp|B4JW98|CALYP_DROGR Ubiquitin carboxyl-terminal hydrolase calypso OS=Drosophila
grimshawi GN=calypso PE=3 SV=1
Length = 462
Score = 104 bits (259), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 57/149 (38%), Positives = 84/149 (56%), Gaps = 13/149 (8%)
Query: 4 AGNWCLIESDPGVFTELIRGFGVQGVQVEELWSLEPENLKILQPVHGLIFLFKLREDTEP 63
A W +ESDPG+FT L+ FG VQVEE++ L+ K ++ +G IFLF+ E+
Sbjct: 27 ADGWLELESDPGLFTLLLEDFGCHDVQVEEVYDLQ----KPIESPYGFIFLFRWIEERRA 82
Query: 64 AGSIVQ---------DSRLETIFFAKQVVNNACATQAILSILLNNSDPEVKLGSVLTEFK 114
IV+ + + +IFFA+QVV N+CAT A+LS+LLN ++ ++LG L K
Sbjct: 83 RRKIVETTAEIFVKDEEAISSIFFAQQVVPNSCATHALLSVLLNCNENNLQLGETLGRLK 142
Query: 115 DFCQSFDPTMKGYALSNSQPIRTVHNSFA 143
+ P KG A+ N+ + HNS A
Sbjct: 143 AHTKGMSPENKGLAIGNTPELACAHNSHA 171
>sp|Q291J4|CALYP_DROPS Ubiquitin carboxyl-terminal hydrolase calypso OS=Drosophila
pseudoobscura pseudoobscura GN=calypso PE=3 SV=1
Length = 475
Score = 104 bits (259), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 57/149 (38%), Positives = 85/149 (57%), Gaps = 13/149 (8%)
Query: 4 AGNWCLIESDPGVFTELIRGFGVQGVQVEELWSLEPENLKILQPVHGLIFLFKLREDTEP 63
A W +ESDPG+FT L+ FG VQVEE++ L+ K ++ +G IFLF+ E+
Sbjct: 42 ADGWLELESDPGLFTLLLEDFGCHDVQVEEVYDLQ----KPIESPYGFIFLFRWIEERRA 97
Query: 64 AGSIVQDSR---------LETIFFAKQVVNNACATQAILSILLNNSDPEVKLGSVLTEFK 114
IV+ + + +IFFA+QVV N+CAT A+LS+LLN ++ ++LG L+ K
Sbjct: 98 RRKIVETTAEIFVKDEEAISSIFFAQQVVPNSCATHALLSVLLNCNENNLQLGDTLSRLK 157
Query: 115 DFCQSFDPTMKGYALSNSQPIRTVHNSFA 143
+ P KG A+ N+ + HNS A
Sbjct: 158 VHTKGMSPENKGLAIGNTPELACAHNSHA 186
>sp|B4GAM2|CALYP_DROPE Ubiquitin carboxyl-terminal hydrolase calypso OS=Drosophila
persimilis GN=calypso PE=3 SV=1
Length = 475
Score = 104 bits (259), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 57/149 (38%), Positives = 85/149 (57%), Gaps = 13/149 (8%)
Query: 4 AGNWCLIESDPGVFTELIRGFGVQGVQVEELWSLEPENLKILQPVHGLIFLFKLREDTEP 63
A W +ESDPG+FT L+ FG VQVEE++ L+ K ++ +G IFLF+ E+
Sbjct: 42 ADGWLELESDPGLFTLLLEDFGCHDVQVEEVYDLQ----KPIESPYGFIFLFRWIEERRA 97
Query: 64 AGSIVQDSR---------LETIFFAKQVVNNACATQAILSILLNNSDPEVKLGSVLTEFK 114
IV+ + + +IFFA+QVV N+CAT A+LS+LLN ++ ++LG L+ K
Sbjct: 98 RRKIVETTAEIFVKDEEAISSIFFAQQVVPNSCATHALLSVLLNCNENNLQLGDTLSRLK 157
Query: 115 DFCQSFDPTMKGYALSNSQPIRTVHNSFA 143
+ P KG A+ N+ + HNS A
Sbjct: 158 VHTKGMSPENKGLAIGNTPELACAHNSHA 186
>sp|P35122|UCHL_DROME Ubiquitin carboxyl-terminal hydrolase OS=Drosophila melanogaster
GN=Uch PE=2 SV=2
Length = 227
Score = 62.8 bits (151), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 48/176 (27%), Positives = 82/176 (46%), Gaps = 16/176 (9%)
Query: 6 NWCLIESDPGVFTELIRGFGVQ-GVQVEELWSLEPENLK-ILQPVHGLIFLFKLREDTEP 63
W +ES+P V T+ I GV V ++ LE + L+ I +PV I LF E E
Sbjct: 3 TWTPLESNPEVLTKYIHKLGVSPAWSVTDVIGLEDDTLEWIPRPVKAFILLFPCSETYEK 62
Query: 64 AGSI-------VQDSRLETIFFAKQVVNNACATQAILSILLNNSDPEVKLGSVLTEFKDF 116
+ V++ E +F+ +Q +NAC T A++ + NN + ++ G VL +F +
Sbjct: 63 HRAEEHDRIKEVEEQHPEDLFYMRQFTHNACGTVALIHSVANNKEVDIDRG-VLKDFLEK 121
Query: 117 CQSFDPTMKGYALSNSQPIRTVHNSFAR------YSSEEIRFNLLAVVCDKKMKYE 166
S P +G AL + H + A+ + E++ + +A+V + YE
Sbjct: 122 TASLSPEERGRALEKDEKFTADHEALAQEGQTNAANHEKVIHHFIALVNKEGTLYE 177
>sp|Q9JKB1|UCHL3_MOUSE Ubiquitin carboxyl-terminal hydrolase isozyme L3 OS=Mus musculus
GN=Uchl3 PE=1 SV=2
Length = 230
Score = 58.5 bits (140), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 42/154 (27%), Positives = 73/154 (47%), Gaps = 12/154 (7%)
Query: 7 WCLIESDPGVFTELIRGFGVQ-GVQVEELWSLEPENLKIL-QPVHGLIFLFKLRE----- 59
W +E++P V + ++ G+ Q +++ +EPE L ++ +PV ++ LF + E
Sbjct: 6 WLPLEANPEVTNQFLKQLGLHPNWQFVDVYGMEPELLSMVPRPVCAVLLLFPITEKYEVF 65
Query: 60 ---DTEPAGSIVQDSRLETIFFAKQVVNNACATQAILSILLNNSDP-EVKLGSVLTEFKD 115
+ E S QD +++F KQ ++NAC T ++ + NN D + GS L +F +
Sbjct: 66 RTEEEEKIKSQGQDVT-SSVYFMKQTISNACGTIGLIHAIANNKDKMHFESGSTLKKFLE 124
Query: 116 FCQSFDPTMKGYALSNSQPIRTVHNSFARYSSEE 149
S P + L N IR H + A E
Sbjct: 125 ESVSMSPEERAKFLENYDAIRVTHETSAHEGQTE 158
>sp|Q2TBG8|UCHL3_BOVIN Ubiquitin carboxyl-terminal hydrolase isozyme L3 OS=Bos taurus
GN=UCHL3 PE=2 SV=1
Length = 230
Score = 58.5 bits (140), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 41/154 (26%), Positives = 73/154 (47%), Gaps = 12/154 (7%)
Query: 7 WCLIESDPGVFTELIRGFGVQ-GVQVEELWSLEPENLKIL-QPVHGLIFLFKLRE----- 59
W +E++P V + ++ G+ Q +++ ++PE L ++ +PV ++ LF + E
Sbjct: 6 WLPLEANPEVTNQFLKQLGLHPNWQFVDVYGMDPELLSMVPRPVCAVLLLFPITEKYEVF 65
Query: 60 ---DTEPAGSIVQDSRLETIFFAKQVVNNACATQAILSILLNNSDP-EVKLGSVLTEFKD 115
+ E S QD +++F KQ ++NAC T ++ + NN D + GS L +F +
Sbjct: 66 RTEEEEKIKSQGQDV-TSSVYFMKQTISNACGTIGLIHAIANNKDKMHFESGSTLKKFLE 124
Query: 116 FCQSFDPTMKGYALSNSQPIRTVHNSFARYSSEE 149
S P + L N IR H + A E
Sbjct: 125 ESASMSPEERARYLENYDAIRVTHETSAHEGQTE 158
>sp|Q91Y78|UCHL3_RAT Ubiquitin carboxyl-terminal hydrolase isozyme L3 OS=Rattus
norvegicus GN=Uchl3 PE=1 SV=1
Length = 230
Score = 58.2 bits (139), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 41/154 (26%), Positives = 73/154 (47%), Gaps = 12/154 (7%)
Query: 7 WCLIESDPGVFTELIRGFGVQ-GVQVEELWSLEPENLKIL-QPVHGLIFLFKLRE----- 59
W +E++P V + ++ G+ Q +++ +EPE L ++ +PV ++ LF + E
Sbjct: 6 WLPLEANPEVTNQFLKQLGLHPNWQFVDVYGMEPELLSMVPRPVCAVLLLFPITEKYEVF 65
Query: 60 ---DTEPAGSIVQDSRLETIFFAKQVVNNACATQAILSILLNNSDP-EVKLGSVLTEFKD 115
+ E S QD +++F KQ ++NAC T ++ + NN D + GS L +F +
Sbjct: 66 RTEEEEKIKSQGQDV-TSSVYFMKQTISNACGTIGLIHAIANNKDKMHFESGSALKKFLE 124
Query: 116 FCQSFDPTMKGYALSNSQPIRTVHNSFARYSSEE 149
+ P + L N IR H + A E
Sbjct: 125 ESVAMSPEERARHLENYDAIRVTHETSAHEGQTE 158
>sp|P15374|UCHL3_HUMAN Ubiquitin carboxyl-terminal hydrolase isozyme L3 OS=Homo sapiens
GN=UCHL3 PE=1 SV=1
Length = 230
Score = 57.8 bits (138), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 41/154 (26%), Positives = 73/154 (47%), Gaps = 12/154 (7%)
Query: 7 WCLIESDPGVFTELIRGFGVQ-GVQVEELWSLEPENLKIL-QPVHGLIFLFKLRE----- 59
W +E++P V + ++ G+ Q +++ ++PE L ++ +PV ++ LF + E
Sbjct: 6 WLPLEANPEVTNQFLKQLGLHPNWQFVDVYGMDPELLSMVPRPVCAVLLLFPITEKYEVF 65
Query: 60 ---DTEPAGSIVQDSRLETIFFAKQVVNNACATQAILSILLNNSDP-EVKLGSVLTEFKD 115
+ E S QD +++F KQ ++NAC T ++ + NN D + GS L +F +
Sbjct: 66 RTEEEEKIKSQGQDVT-SSVYFMKQTISNACGTIGLIHAIANNKDKMHFESGSTLKKFLE 124
Query: 116 FCQSFDPTMKGYALSNSQPIRTVHNSFARYSSEE 149
S P + L N IR H + A E
Sbjct: 125 ESVSMSPEERARYLENYDAIRVTHETSAHEGQTE 158
>sp|O01391|UCHL_APLCA Ubiquitin carboxyl-terminal hydrolase OS=Aplysia californica GN=UCH
PE=2 SV=1
Length = 214
Score = 52.4 bits (124), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 35/127 (27%), Positives = 61/127 (48%), Gaps = 9/127 (7%)
Query: 1 MSDAGNWCLIESDPGVFTELIRGFGVQ-GVQVEELWSLEPENLKIL-QPVHGLIFLFKLR 58
M+ W +ES+P V + + G+ G +++ L+PE L ++ +P L+ LF
Sbjct: 1 MASEQRWIPLESNPKVLNKYVHNLGMDAGWNFVDVFGLDPELLAMVPRPAAALVLLFP-- 58
Query: 59 EDTEPAGSIV---QDSRLETIFFAKQVVNNACATQAILSILLNNSDPEVKLGSVLTEFKD 115
+D E ++ Q +++++ KQ + NAC T AI+ L NN + V FK
Sbjct: 59 DDKETVNQLIGEYQSDYPDSLYYTKQTIGNACGTVAIVHALANNEN--VIPFDAAKHFKT 116
Query: 116 FCQSFDP 122
F + P
Sbjct: 117 FLEKTKP 123
>sp|P58321|UCHL4_MOUSE Ubiquitin carboxyl-terminal hydrolase isozyme L4 OS=Mus musculus
GN=Uchl4 PE=1 SV=1
Length = 233
Score = 52.0 bits (123), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 42/157 (26%), Positives = 72/157 (45%), Gaps = 15/157 (9%)
Query: 7 WCLIESDPGVFTELIRGFGVQ-GVQVEELWSLEPENLKIL-QPVHGLIFLFKLRE----- 59
W +E++P V + ++ G+ Q +++ +E E L I+ +PV ++ LF + E
Sbjct: 6 WLPLEANPEVTNQFLKQLGLHPNWQFVDVYGMESELLSIIPRPVCAVLLLFPITEKYEVF 65
Query: 60 ---DTEPAGSIVQDSRLETIFFAKQVVNNACATQAILSI---LLNNSDP-EVKLGSVLTE 112
+ E S QD +++F KQ ++NAC T + + + NN D + GS L +
Sbjct: 66 RTEEEEKIKSQGQDVT-SSVYFMKQTISNACGTIGTIGLIHAIANNKDKVHFESGSTLKK 124
Query: 113 FKDFCQSFDPTMKGYALSNSQPIRTVHNSFARYSSEE 149
F + S P + L N IR H + A E
Sbjct: 125 FLEESVSMSPEERAKYLENYDAIRVTHETSAHEGQTE 161
>sp|Q06AB3|UCHL3_PIG Ubiquitin carboxyl-terminal hydrolase isozyme L3 OS=Sus scrofa
GN=UCHL3 PE=2 SV=1
Length = 230
Score = 50.8 bits (120), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 38/154 (24%), Positives = 72/154 (46%), Gaps = 12/154 (7%)
Query: 7 WCLIESDPGVFTELIRGFGVQ-GVQVEELWSLEPENLKIL-QPVHGLIFLFKLRE----- 59
W +E++P V + ++ G+ Q +++ ++PE L ++ +PV ++ LF + E
Sbjct: 6 WLPLEANPEVTNQFLKQLGLHPNWQFVDVYGMDPELLSMVPRPVCAVLLLFPITEKYEVF 65
Query: 60 ---DTEPAGSIVQDSRLETIFFAKQVVNNACATQAILSILLNNSDP-EVKLGSVLTEFKD 115
+ E S QD +++F KQ ++NAC T ++ + NN + + GS L +F +
Sbjct: 66 RTEEEEKIKSQGQDVT-PSVYFMKQTISNACGTIGLIHAIANNKNKMHFESGSTLKKFLE 124
Query: 116 FCQSFDPTMKGYALSNSQPIRTVHNSFARYSSEE 149
S P + L + I H + A E
Sbjct: 125 ESASMSPDERARYLESYDAIPVTHETSAHEGQTE 158
>sp|P35127|UBL1_YEAST Ubiquitin carboxyl-terminal hydrolase YUH1 OS=Saccharomyces
cerevisiae (strain ATCC 204508 / S288c) GN=YUH1 PE=1
SV=1
Length = 236
Score = 48.5 bits (114), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 37/93 (39%), Positives = 51/93 (54%), Gaps = 4/93 (4%)
Query: 10 IESDPGVFTELIRGFGVQGVQVE-ELWSL-EPENLKIL-QPVHGLIFLFKLREDTEPAGS 66
IES+P VFT G++ +++SL EPE L L +PV ++ LF + ED + + S
Sbjct: 11 IESNPEVFTNFAHKLGLKNEWAYFDIYSLTEPELLAFLPRPVKAIVLLFPINEDRKSSTS 70
Query: 67 IVQDSRLETIFFAKQVVNNACATQAILSILLNN 99
S + I+F KQ V NAC AIL L NN
Sbjct: 71 QQITSSYDVIWF-KQSVKNACGLYAILHSLSNN 102
>sp|Q10171|UBLH1_SCHPO Probable ubiquitin carboxyl-terminal hydrolase 1
OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843)
GN=uch1 PE=3 SV=1
Length = 222
Score = 47.8 bits (112), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 40/149 (26%), Positives = 70/149 (46%), Gaps = 22/149 (14%)
Query: 7 WCLIESDPGVFTELIRGFGVQGVQVEELWSLEPENLKILQPVHGLIFLFKLREDTEPAGS 66
W +E+ P V ++ GVQ V +L+SLE I +PVH L+F+F + +
Sbjct: 2 WRPLENTPEVLEPYLQKIGVQDASVFDLFSLEEIPEYIPRPVHALLFVFP----SSGTKT 57
Query: 67 IVQDSRL-----ETIFFAKQVVNNACATQAILSILLNNSDPEVKLGSVLTEFKDFCQSFD 121
I + SR+ + + + Q + NAC T +L + N +L + E DF +S
Sbjct: 58 IYKGSRILPKDSDKVLWYPQTIPNACGTIGLLHAVSNG-----ELRRKVNE-NDFIKSLI 111
Query: 122 PTMKGYA-------LSNSQPIRTVHNSFA 143
T +G + + +S+ + +H +FA
Sbjct: 112 RTAEGSSIEERAKLIEDSKELEALHAAFA 140
>sp|Q00981|UCHL1_RAT Ubiquitin carboxyl-terminal hydrolase isozyme L1 OS=Rattus
norvegicus GN=Uchl1 PE=1 SV=2
Length = 223
Score = 45.4 bits (106), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 37/147 (25%), Positives = 66/147 (44%), Gaps = 16/147 (10%)
Query: 10 IESDPGVFTELIRGFGVQGV-QVEELWSLEPENL-KILQPVHGLIFLFKL---------R 58
+E +P + +++ GV G + ++ LE E L + P L+ LF L +
Sbjct: 6 MEINPEMLNKVLAKLGVAGQWRFADVLGLEEETLGSVPSPACALLLLFPLTAQHENFRKK 65
Query: 59 EDTEPAGSIVQDSRLETIFFAKQVVNNACATQAILSILLNNSDP-EVKLGSVLTEFKDFC 117
+ E G V ++F KQ + N+C T ++ + NN D E + GSVL +F
Sbjct: 66 QIEELKGQEVSPK----VYFMKQTIGNSCGTIGLIHAVANNQDKLEFEDGSVLKQFLSET 121
Query: 118 QSFDPTMKGYALSNSQPIRTVHNSFAR 144
+ P + ++ I+ H+S A+
Sbjct: 122 EKLSPEDRAKCFEKNEAIQAAHDSVAQ 148
>sp|Q9R0P9|UCHL1_MOUSE Ubiquitin carboxyl-terminal hydrolase isozyme L1 OS=Mus musculus
GN=Uchl1 PE=1 SV=1
Length = 223
Score = 45.4 bits (106), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 37/147 (25%), Positives = 66/147 (44%), Gaps = 16/147 (10%)
Query: 10 IESDPGVFTELIRGFGVQGV-QVEELWSLEPENL-KILQPVHGLIFLFKL---------R 58
+E +P + +++ GV G + ++ LE E L + P L+ LF L +
Sbjct: 6 MEINPEMLNKVLAKLGVAGQWRFADVLGLEEETLGSVPSPACALLLLFPLTAQHENFRKK 65
Query: 59 EDTEPAGSIVQDSRLETIFFAKQVVNNACATQAILSILLNNSDP-EVKLGSVLTEFKDFC 117
+ E G V ++F KQ + N+C T ++ + NN D E + GSVL +F
Sbjct: 66 QIEELKGQEVSPK----VYFMKQTIGNSCGTIGLIHAVANNQDKLEFEDGSVLKQFLSET 121
Query: 118 QSFDPTMKGYALSNSQPIRTVHNSFAR 144
+ P + ++ I+ H+S A+
Sbjct: 122 EKLSPEDRAKCFEKNEAIQAAHDSVAQ 148
>sp|Q54T48|UCHL_DICDI Probable ubiquitin carboxyl-terminal hydrolase OS=Dictyostelium
discoideum GN=uch1 PE=3 SV=1
Length = 255
Score = 45.4 bits (106), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 35/148 (23%), Positives = 67/148 (45%), Gaps = 18/148 (12%)
Query: 6 NWCLIESDPGVFTELIRGFGV-QGVQVEELWSLEPENLKIL-QPVHGLIFLF-------- 55
NW +E++P V T ++ GV + + +++ ++ L+++ P +I LF
Sbjct: 13 NWIPLEANPEVLTTFMQSLGVSKDWEFCDIYGIDEGLLEMVPSPCVAVILLFPITNEYED 72
Query: 56 ---KLREDTEPAGSIVQDSRLETIFFAKQVVNNACATQAILSILLNNSDP-EVKLGSVLT 111
KL ++ E G ++ D ++F KQ + NAC T ++ +LNN++ E
Sbjct: 73 KRYKLEKEIEEKGQVLSDK----VYFMKQYIGNACGTIGVIHSVLNNANVIEFNENGFFK 128
Query: 112 EFKDFCQSFDPTMKGYALSNSQPIRTVH 139
+F D S + +L + I H
Sbjct: 129 QFLDKTTSLSTEERAISLLKNSEIEKSH 156
>sp|Q6SEG5|UCHL1_PIG Ubiquitin carboxyl-terminal hydrolase isozyme L1 OS=Sus scrofa
GN=UCHL1 PE=2 SV=1
Length = 223
Score = 43.9 bits (102), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 36/147 (24%), Positives = 67/147 (45%), Gaps = 16/147 (10%)
Query: 10 IESDPGVFTELIRGFGVQGV-QVEELWSLEPENL-KILQPVHGLIFLFKL---------R 58
+E +P + +++ GV G + ++ LE E+L + P L+ LF L +
Sbjct: 6 MEINPEMLNKVLTRLGVAGHWRFADVLGLEEESLGSVPAPACALLLLFPLTAQHENFRKK 65
Query: 59 EDTEPAGSIVQDSRLETIFFAKQVVNNACATQAILSILLNNSDP-EVKLGSVLTEFKDFC 117
+ E G V ++F KQ + N+C T ++ + NN D E + GSVL +F
Sbjct: 66 QIEELKGQEVSPK----VYFMKQTIGNSCGTIGLIHAVANNQDKLEFEDGSVLKQFLSET 121
Query: 118 QSFDPTMKGYALSNSQPIRTVHNSFAR 144
+ P + ++ I+ H++ A+
Sbjct: 122 EKLSPEDRAKCFEKNEAIQAAHDAVAQ 148
>sp|Q9GM50|UCHL1_HORSE Ubiquitin carboxyl-terminal hydrolase isozyme L1 OS=Equus caballus
GN=UCHL1 PE=2 SV=2
Length = 223
Score = 43.1 bits (100), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 36/147 (24%), Positives = 66/147 (44%), Gaps = 16/147 (10%)
Query: 10 IESDPGVFTELIRGFGVQGV-QVEELWSLEPENL-KILQPVHGLIFLFKL---------R 58
+E +P + +++ GV G + ++ LE E L + P L+ LF L +
Sbjct: 6 MEINPEMLNKVLARLGVAGQWRFVDVLGLEEETLGSVPAPACALLLLFPLTAQHENFRKK 65
Query: 59 EDTEPAGSIVQDSRLETIFFAKQVVNNACATQAILSILLNNSDP-EVKLGSVLTEFKDFC 117
+ E G V ++F KQ + N+C T ++ + NN D E + GSVL +F
Sbjct: 66 QIEELKGQEVSPK----VYFMKQTIGNSCGTIGLIHAVANNQDKLEFEDGSVLKQFLSET 121
Query: 118 QSFDPTMKGYALSNSQPIRTVHNSFAR 144
+ P + ++ I+ H++ A+
Sbjct: 122 EKLSPEDRAKCFEKNEAIQAAHDAVAQ 148
>sp|P23356|UCHL1_BOVIN Ubiquitin carboxyl-terminal hydrolase isozyme L1 OS=Bos taurus
GN=UCHL1 PE=1 SV=2
Length = 252
Score = 41.2 bits (95), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 19/70 (27%), Positives = 36/70 (51%), Gaps = 1/70 (1%)
Query: 76 IFFAKQVVNNACATQAILSILLNNSDP-EVKLGSVLTEFKDFCQSFDPTMKGYALSNSQP 134
++F KQ + N+C T ++ + NN D E + GSVL +F + P + ++
Sbjct: 108 VYFMKQTIGNSCGTIGLIHAVANNQDKLEFEDGSVLKQFLSETEKLSPEDRAKCFEKNEA 167
Query: 135 IRTVHNSFAR 144
I+ H++ A+
Sbjct: 168 IQAAHDAVAQ 177
>sp|P09936|UCHL1_HUMAN Ubiquitin carboxyl-terminal hydrolase isozyme L1 OS=Homo sapiens
GN=UCHL1 PE=1 SV=2
Length = 223
Score = 40.8 bits (94), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 35/147 (23%), Positives = 66/147 (44%), Gaps = 16/147 (10%)
Query: 10 IESDPGVFTELIRGFGVQGV-QVEELWSLEPENL-KILQPVHGLIFLFKL---------R 58
+E +P + +++ GV G + ++ LE E+L + P L+ LF L +
Sbjct: 6 MEINPEMLNKVLSRLGVAGQWRFVDVLGLEEESLGSVPAPACALLLLFPLTAQHENFRKK 65
Query: 59 EDTEPAGSIVQDSRLETIFFAKQVVNNACATQAILSILLNNSDP-EVKLGSVLTEFKDFC 117
+ E G V ++F KQ + N+C T ++ + NN D + GSVL +F
Sbjct: 66 QIEELKGQEVSPK----VYFMKQTIGNSCGTIGLIHAVANNQDKLGFEDGSVLKQFLSET 121
Query: 118 QSFDPTMKGYALSNSQPIRTVHNSFAR 144
+ P + ++ I+ H++ A+
Sbjct: 122 EKMSPEDRAKCFEKNEAIQAAHDAVAQ 148
>sp|Q60HC8|UCHL1_MACFA Ubiquitin carboxyl-terminal hydrolase isozyme L1 OS=Macaca
fascicularis GN=UCHL1 PE=2 SV=1
Length = 223
Score = 39.7 bits (91), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 33/147 (22%), Positives = 66/147 (44%), Gaps = 16/147 (10%)
Query: 10 IESDPGVFTELIRGFGVQGV-QVEELWSLEPENL-KILQPVHGLIFLFKLREDTEPAGSI 67
+E +P + +++ GV G + ++ LE ++L + P L+ LF L E
Sbjct: 6 MEINPEMLNKVLSRLGVAGQWRFVDVLGLEEDSLGSVPAPACALLLLFPLTAQHEN---- 61
Query: 68 VQDSRLE---------TIFFAKQVVNNACATQAILSILLNNSDP-EVKLGSVLTEFKDFC 117
+ ++E ++F KQ + N+C T ++ + NN D + GSVL +F
Sbjct: 62 FRKKQIEELKGQEVSPKVYFMKQTIGNSCGTIGLIHAVANNQDKLGFEDGSVLKQFLSET 121
Query: 118 QSFDPTMKGYALSNSQPIRTVHNSFAR 144
+ P + ++ I+ H++ A+
Sbjct: 122 EKMSPEDRAKCFEKNEAIQAAHDAVAQ 148
>sp|P50103|UCHL1_MONDO Ubiquitin carboxyl-terminal hydrolase isozyme L1 OS=Monodelphis
domestica GN=UCHL1 PE=3 SV=2
Length = 223
Score = 39.3 bits (90), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 21/85 (24%), Positives = 39/85 (45%), Gaps = 5/85 (5%)
Query: 76 IFFAKQVVNNACATQAILSILLNNSDP-EVKLGSVLTEFKDFCQSFDPTMKGYALSNSQP 134
++F KQ V N+C T ++ + NN D GSVL +F P + ++
Sbjct: 79 VYFMKQTVGNSCGTIGLIHAVANNQDKLNFDDGSVLKQFISETAKLSPEDRAKCFEKNEA 138
Query: 135 IRTVHNSFARYS----SEEIRFNLL 155
I+ H++ A+ +E+ F+ +
Sbjct: 139 IQAAHDAVAQEGQCRVDDEVNFHFI 163
>sp|Q9DB20|ATPO_MOUSE ATP synthase subunit O, mitochondrial OS=Mus musculus GN=Atp5o PE=1
SV=1
Length = 213
Score = 33.9 bits (76), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 24/75 (32%), Positives = 34/75 (45%), Gaps = 13/75 (17%)
Query: 166 EKELAAATQALKDPSLDAATKTAKQNEVVQLKILIEEEAAKLESYRIENIRRKHNYLPLI 225
EKEL Q LKDP + A V++K L +I ++ + PL
Sbjct: 59 EKELLRVGQLLKDPKVSLAVLNPYIKRTVKVKSL-------------NDITKREKFSPLT 105
Query: 226 MNLLKLLAKQGQLVN 240
NL+ LLA+ G+L N
Sbjct: 106 ANLMNLLAENGRLGN 120
>sp|P78395|PRAME_HUMAN Melanoma antigen preferentially expressed in tumors OS=Homo sapiens
GN=PRAME PE=1 SV=1
Length = 509
Score = 32.7 bits (73), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 27/84 (32%), Positives = 43/84 (51%), Gaps = 4/84 (4%)
Query: 171 AATQALKDPSLDAATKTAKQNEV---VQLKILIEEEAA-KLESYRIENIRRKHNYLPLIM 226
AA K +D + A+Q + V + + ++E A +L SY IE ++RK N L L
Sbjct: 151 AAQPMTKKRKVDGLSTEAEQPFIPVEVLVDLFLKEGACDELFSYLIEKVKRKKNVLRLCC 210
Query: 227 NLLKLLAKQGQLVNLYQKAVELNS 250
LK+ A Q + + K V+L+S
Sbjct: 211 KKLKIFAMPMQDIKMILKMVQLDS 234
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.316 0.132 0.369
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 87,112,848
Number of Sequences: 539616
Number of extensions: 3311088
Number of successful extensions: 10409
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 41
Number of HSP's successfully gapped in prelim test: 65
Number of HSP's that attempted gapping in prelim test: 10238
Number of HSP's gapped (non-prelim): 166
length of query: 258
length of database: 191,569,459
effective HSP length: 115
effective length of query: 143
effective length of database: 129,513,619
effective search space: 18520447517
effective search space used: 18520447517
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 60 (27.7 bits)