Query psy6733
Match_columns 257
No_of_seqs 238 out of 1474
Neff 6.4
Searched_HMMs 13730
Date Fri Aug 16 17:04:25 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy6733.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/6733hhsearch_scop -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d1oiga_ g.3.18.1 (A:) Dumpy {F 20.3 7.1 0.00052 20.4 -0.6 13 11-23 6-18 (26)
2 d1xmeb2 f.17.2.1 (B:3-36) Bact 18.6 22 0.0016 19.4 1.2 20 72-91 14-33 (34)
3 d2cs3a1 g.44.1.3 (A:8-87) Prot 14.1 17 0.0013 24.1 -0.1 13 9-21 48-60 (80)
4 d2crda_ g.3.7.2 (A:) Charybdot 12.8 74 0.0054 17.9 2.5 22 11-32 3-24 (37)
5 d1rk8c_ b.72.3.1 (C:) Pym (Wit 10.9 29 0.0021 19.2 0.3 10 41-50 16-25 (33)
6 d1zrja1 a.140.2.1 (A:1-37) Het 10.5 65 0.0047 18.2 1.8 19 20-38 6-24 (37)
7 d1vg0a1 c.3.1.3 (A:3-444,A:558 10.0 62 0.0045 28.6 2.4 20 130-149 11-30 (491)
8 d4cpai_ g.3.2.1 (I:) Carboxype 8.1 83 0.006 17.5 1.5 22 34-55 8-30 (37)
9 d1j5ja_ g.3.7.2 (A:) Bekm-1 {L 7.8 1.2E+02 0.0084 16.7 2.1 24 10-33 2-25 (36)
10 d1ecib_ a.33.1.1 (B:) Ectatomi 7.5 10 0.00076 20.9 -2.6 19 13-31 8-30 (34)
No 1
>d1oiga_ g.3.18.1 (A:) Dumpy {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}
Probab=20.30 E-value=7.1 Score=20.44 Aligned_cols=13 Identities=23% Similarity=0.672 Sum_probs=10.3
Q ss_pred CcccCCChhhHHH
Q psy6733 11 TDVFCPTAKYCTA 23 (257)
Q Consensus 11 ~~~~~~~~~~~~~ 23 (257)
-|+-||...+|+.
T Consensus 6 l~sdcpsn~acvn 18 (26)
T d1oiga_ 6 LNSDCPSNQACVN 18 (26)
T ss_dssp SSTTSSTTCEECS
T ss_pred EcCCCCccHhHhc
Confidence 4678999999874
No 2
>d1xmeb2 f.17.2.1 (B:3-36) Bacterial ba3 type cytochrome c oxidase subunit II {Thermus thermophilus [TaxId: 274]}
Probab=18.58 E-value=22 Score=19.43 Aligned_cols=20 Identities=15% Similarity=0.242 Sum_probs=10.2
Q ss_pred ccccchhhHHHHHHHHHHHH
Q psy6733 72 RDCTPFTFASVCSGISVYSL 91 (257)
Q Consensus 72 ~~~~~~~F~~si~WI~~~s~ 91 (257)
++|..++..|..+.|+.++|
T Consensus 14 kgwlafslamlfvfialiay 33 (34)
T d1xmeb2 14 KGWLAFSLAMLFVFIALIAY 33 (34)
T ss_dssp HHHHHHHHHHHHHHHHHHHH
T ss_pred hhHHHHHHHHHHHHHHHHhc
Confidence 34555555555555554443
No 3
>d2cs3a1 g.44.1.3 (A:8-87) Protein c14orf4 (KIAA1865) {Human (Homo sapiens) [TaxId: 9606]}
Probab=14.12 E-value=17 Score=24.12 Aligned_cols=13 Identities=38% Similarity=1.132 Sum_probs=10.4
Q ss_pred CCCcccCCChhhH
Q psy6733 9 ADTDVFCPTAKYC 21 (257)
Q Consensus 9 ~~~~~~~~~~~~~ 21 (257)
++.+++||..+.|
T Consensus 48 ~~~evyCPSG~kC 60 (80)
T d2cs3a1 48 ATGEVYCPSGEKC 60 (80)
T ss_dssp SSSCCCCTTSSCC
T ss_pred CCCcEECCCCCcc
Confidence 3458999999877
No 4
>d2crda_ g.3.7.2 (A:) Charybdotoxin {Scorpion (Leiurus quinquestriatus hebraeus) [TaxId: 6884]}
Probab=12.82 E-value=74 Score=17.88 Aligned_cols=22 Identities=27% Similarity=0.412 Sum_probs=18.9
Q ss_pred CcccCCChhhHHHHHHhhhccC
Q psy6733 11 TDVFCPTAKYCTATLAATLDKQ 32 (257)
Q Consensus 11 ~~~~~~~~~~~~~~~~~~~~~~ 32 (257)
||+-|...|.|-+--|++...+
T Consensus 3 t~v~Ct~SkeCW~vCk~~~g~~ 24 (37)
T d2crda_ 3 TNVSCTTSKECWSVCQRLHNTS 24 (37)
T ss_dssp CSCCCSSTHHHHHHHHHHSSCC
T ss_pred eeeeeccchhHhHHHHHHhCCC
Confidence 7999999999999988876654
No 5
>d1rk8c_ b.72.3.1 (C:) Pym (Within the bgcn gene intron protein, WIBG), N-terminal domain {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}
Probab=10.89 E-value=29 Score=19.15 Aligned_cols=10 Identities=40% Similarity=0.398 Sum_probs=7.8
Q ss_pred CCCCCCcccc
Q psy6733 41 HPVGTSRCQP 50 (257)
Q Consensus 41 ~~~~~~~~~~ 50 (257)
-|+|+|||+.
T Consensus 16 RpDGtWRK~r 25 (33)
T d1rk8c_ 16 RPDGTWRKAR 25 (33)
T ss_dssp CTTSCEECCE
T ss_pred CCCCccccce
Confidence 6899998753
No 6
>d1zrja1 a.140.2.1 (A:1-37) Heterogeneous nuclear ribonucleoprotein U-like protein 1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=10.49 E-value=65 Score=18.19 Aligned_cols=19 Identities=16% Similarity=0.088 Sum_probs=15.6
Q ss_pred hHHHHHHhhhccCCCCCCC
Q psy6733 20 YCTATLAATLDKQTLPPCL 38 (257)
Q Consensus 20 ~~~~~~~~~~~~~~~~~~~ 38 (257)
-=++++|+.|++..++.+.
T Consensus 6 m~V~eLK~~Lk~rgL~~sG 24 (37)
T d1zrja1 6 LKVNELREELQRRGLDTRG 24 (37)
T ss_dssp SCHHHHHHHHHHTTCCCCS
T ss_pred CcHHHHHHHHHHCCCCCCC
Confidence 3478999999999998764
No 7
>d1vg0a1 c.3.1.3 (A:3-444,A:558-606) Rab escort protein 1 {Rat (Rattus norvegicus) [TaxId: 10116]}
Probab=10.05 E-value=62 Score=28.57 Aligned_cols=20 Identities=20% Similarity=0.494 Sum_probs=18.3
Q ss_pred hhcCChhHHHHHHHHHHhCC
Q psy6733 130 AAGVSVPDALSSLAVVKEGY 149 (257)
Q Consensus 130 A~GtSlPDli~si~aar~G~ 149 (257)
-+||+++|.+.+.+.+|+|+
T Consensus 11 I~GTGL~ESILAaAlSr~Gk 30 (491)
T d1vg0a1 11 VIGTGLPESIIAAACSRSGQ 30 (491)
T ss_dssp EECCSHHHHHHHHHHHHTTC
T ss_pred EECCChHHHHHHHHHHhcCC
Confidence 47999999999999999985
No 8
>d4cpai_ g.3.2.1 (I:) Carboxypeptidase A inhibitor {Potato [TaxId: 4113]}
Probab=8.08 E-value=83 Score=17.47 Aligned_cols=22 Identities=27% Similarity=0.404 Sum_probs=15.9
Q ss_pred CCCCCCC-CCCCCCccccccccc
Q psy6733 34 LPPCLTP-HPVGTSRCQPHYPYP 55 (257)
Q Consensus 34 ~~~~~~~-~~~~~~~~~~~~~~~ 55 (257)
-+||.+. .=+|++.||+-|.+-
T Consensus 8 ~kpc~t~ddcsg~~fcqacw~~a 30 (37)
T d4cpai_ 8 NKPCKTHDDCSGAWFCQACWNSA 30 (37)
T ss_dssp TCBCSSSSSSCCCSSCCEEETTT
T ss_pred CCCcccccCccchHHHHHHHHhc
Confidence 3566665 448999999999653
No 9
>d1j5ja_ g.3.7.2 (A:) Bekm-1 {Lesser asian scorpion (Buthus eupeus) [TaxId: 34648]}
Probab=7.84 E-value=1.2e+02 Score=16.74 Aligned_cols=24 Identities=21% Similarity=0.415 Sum_probs=20.1
Q ss_pred CCcccCCChhhHHHHHHhhhccCC
Q psy6733 10 DTDVFCPTAKYCTATLAATLDKQT 33 (257)
Q Consensus 10 ~~~~~~~~~~~~~~~~~~~~~~~~ 33 (257)
.||+-|...+.|----|.|..|.+
T Consensus 2 ptdikcs~s~qc~pvck~~fgk~n 25 (36)
T d1j5ja_ 2 PTDIKCSESYQCFPVCKSRFGKTN 25 (36)
T ss_dssp EEEEECSSGGGHHHHHHHHTCCSC
T ss_pred CccceecCccchhHHHHHHcCCCC
Confidence 379999999999999898887643
No 10
>d1ecib_ a.33.1.1 (B:) Ectatomin subunit B, EB {Ant (Ectatomma tuberculatum), venom [TaxId: 39300]}
Probab=7.47 E-value=10 Score=20.85 Aligned_cols=19 Identities=42% Similarity=0.898 Sum_probs=12.8
Q ss_pred ccCCC----hhhHHHHHHhhhcc
Q psy6733 13 VFCPT----AKYCTATLAATLDK 31 (257)
Q Consensus 13 ~~~~~----~~~~~~~~~~~~~~ 31 (257)
.+||+ +|.|...|+.|..+
T Consensus 8 ticptlksmakkcegsiatmikk 30 (34)
T d1ecib_ 8 TICPTLKSMAKKCEGSIATMIKK 30 (34)
T ss_dssp HHHHHHHHHHTTBSTTHHHHHHH
T ss_pred EecchHHHHHHHccchHHHHHHH
Confidence 36887 45677777777654
Done!