Query psy6736
Match_columns 1023
No_of_seqs 736 out of 5291
Neff 8.8
Searched_HMMs 46136
Date Fri Aug 16 17:08:15 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy6736.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/6736hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG0100|consensus 100.0 8E-112 2E-116 877.2 53.3 579 1-602 50-648 (663)
2 PTZ00009 heat shock 70 kDa pro 100.0 9.7E-90 2.1E-94 829.7 69.0 595 1-631 18-652 (653)
3 PRK13411 molecular chaperone D 100.0 4.8E-86 1E-90 796.3 63.8 557 1-601 16-605 (653)
4 PRK13410 molecular chaperone D 100.0 7E-86 1.5E-90 791.5 63.5 554 1-597 16-607 (668)
5 PLN03184 chloroplast Hsp70; Pr 100.0 9.9E-85 2.2E-89 784.9 66.3 554 1-602 53-641 (673)
6 PTZ00400 DnaK-type molecular c 100.0 6.2E-85 1.3E-89 786.7 63.5 552 1-600 55-641 (663)
7 PTZ00186 heat shock 70 kDa pre 100.0 6E-85 1.3E-89 779.2 62.7 552 1-600 41-628 (657)
8 KOG0101|consensus 100.0 6.5E-86 1.4E-90 746.3 45.3 576 1-598 21-615 (620)
9 PRK00290 dnaK molecular chaper 100.0 1.1E-83 2.4E-88 778.2 63.3 551 1-599 16-599 (627)
10 TIGR02350 prok_dnaK chaperone 100.0 1.6E-82 3.4E-87 766.5 62.3 549 1-596 14-594 (595)
11 CHL00094 dnaK heat shock prote 100.0 2.6E-82 5.6E-87 763.2 63.9 549 1-597 16-599 (621)
12 TIGR01991 HscA Fe-S protein as 100.0 1.6E-81 3.5E-86 751.0 63.4 545 1-597 13-585 (599)
13 PRK05183 hscA chaperone protei 100.0 3.8E-80 8.2E-85 740.4 61.3 541 1-598 33-602 (616)
14 KOG0102|consensus 100.0 3.3E-81 7.2E-86 675.2 40.0 570 1-600 41-630 (640)
15 PRK01433 hscA chaperone protei 100.0 1.2E-78 2.6E-83 719.9 59.9 517 1-590 33-572 (595)
16 COG0443 DnaK Molecular chapero 100.0 2.6E-77 5.7E-82 703.8 56.1 547 1-597 19-578 (579)
17 KOG0100|consensus 100.0 9.1E-78 2E-82 623.5 37.0 366 628-1021 218-583 (663)
18 PF00012 HSP70: Hsp70 protein; 100.0 1.2E-74 2.7E-79 706.8 60.3 551 1-597 13-602 (602)
19 KOG0103|consensus 100.0 2.1E-69 4.6E-74 602.2 48.7 499 78-597 107-646 (727)
20 KOG0104|consensus 100.0 3.6E-65 7.8E-70 567.8 43.5 497 81-600 131-740 (902)
21 PTZ00186 heat shock 70 kDa pre 100.0 1.9E-60 4E-65 568.8 40.6 357 633-1021 210-570 (657)
22 KOG0101|consensus 100.0 2.4E-61 5.1E-66 546.6 28.7 365 631-1021 193-557 (620)
23 PRK13410 molecular chaperone D 100.0 1.7E-59 3.7E-64 563.5 41.2 358 633-1022 185-546 (668)
24 PRK13411 molecular chaperone D 100.0 5.1E-59 1.1E-63 561.7 44.6 359 632-1021 183-545 (653)
25 PTZ00009 heat shock 70 kDa pro 100.0 9.4E-59 2E-63 560.3 44.4 364 633-1022 192-556 (653)
26 PTZ00400 DnaK-type molecular c 100.0 1.1E-58 2.4E-63 558.9 42.5 358 632-1021 223-584 (663)
27 PLN03184 chloroplast Hsp70; Pr 100.0 1.6E-58 3.4E-63 557.5 41.4 357 633-1021 222-582 (673)
28 KOG0102|consensus 100.0 2.3E-59 5.1E-64 505.9 24.9 358 634-1023 211-572 (640)
29 CHL00094 dnaK heat shock prote 100.0 1.7E-57 3.8E-62 547.9 41.8 358 632-1021 184-545 (621)
30 PRK00290 dnaK molecular chaper 100.0 2.5E-57 5.5E-62 548.5 43.1 357 633-1021 183-543 (627)
31 TIGR02350 prok_dnaK chaperone 100.0 8.4E-57 1.8E-61 542.8 43.5 358 632-1021 180-541 (595)
32 TIGR01991 HscA Fe-S protein as 100.0 1.4E-56 3.1E-61 536.2 42.4 353 633-1021 179-531 (599)
33 PRK05183 hscA chaperone protei 100.0 5.4E-56 1.2E-60 532.0 39.4 349 633-1021 199-547 (616)
34 PRK01433 hscA chaperone protei 100.0 8.9E-54 1.9E-58 507.6 40.0 335 633-1021 191-525 (595)
35 COG0443 DnaK Molecular chapero 100.0 3E-53 6.4E-58 499.9 30.3 358 633-1022 170-527 (579)
36 PF00012 HSP70: Hsp70 protein; 100.0 1E-50 2.3E-55 495.9 44.0 360 633-1022 186-548 (602)
37 KOG0103|consensus 100.0 2.4E-48 5.2E-53 433.9 30.5 384 632-1022 193-590 (727)
38 PRK11678 putative chaperone; P 100.0 4.7E-46 1E-50 426.6 34.8 336 1-365 14-448 (450)
39 KOG0104|consensus 100.0 5.8E-40 1.3E-44 366.7 27.6 381 632-1022 212-678 (902)
40 PRK13928 rod shape-determining 100.0 1.6E-32 3.5E-37 308.8 28.1 288 38-365 27-324 (336)
41 PRK13929 rod-share determining 100.0 1.5E-31 3.3E-36 299.8 27.1 284 39-362 29-324 (335)
42 PRK13927 rod shape-determining 100.0 1.1E-29 2.5E-34 286.4 25.8 288 37-365 28-325 (334)
43 TIGR00904 mreB cell shape dete 100.0 8.8E-29 1.9E-33 278.4 27.0 247 81-364 71-327 (333)
44 PRK13930 rod shape-determining 100.0 4.7E-28 1E-32 273.7 25.5 288 38-365 32-329 (335)
45 TIGR02529 EutJ ethanolamine ut 100.0 2.2E-28 4.7E-33 259.4 19.6 209 77-360 30-238 (239)
46 PF06723 MreB_Mbl: MreB/Mbl pr 99.9 1.5E-26 3.3E-31 252.2 19.0 284 39-362 26-319 (326)
47 COG1077 MreB Actin-like ATPase 99.9 2E-25 4.4E-30 231.7 21.2 289 39-366 31-333 (342)
48 PRK11678 putative chaperone; P 99.9 6.7E-26 1.5E-30 260.4 19.2 185 631-822 205-448 (450)
49 PRK15080 ethanolamine utilizat 99.9 7.3E-25 1.6E-29 236.7 22.1 242 39-362 23-267 (267)
50 TIGR01174 ftsA cell division p 99.8 3.9E-20 8.5E-25 211.4 18.2 191 132-361 161-371 (371)
51 PRK13928 rod shape-determining 99.8 5.8E-20 1.3E-24 207.0 18.3 172 632-822 144-324 (336)
52 PRK09472 ftsA cell division pr 99.8 8.7E-19 1.9E-23 202.4 22.8 194 132-363 169-387 (420)
53 PRK13927 rod shape-determining 99.8 1.3E-18 2.8E-23 196.5 15.2 172 632-822 145-325 (334)
54 PRK13929 rod-share determining 99.7 1.9E-17 4.2E-22 185.9 17.5 169 632-819 147-324 (335)
55 TIGR00904 mreB cell shape dete 99.7 3.3E-17 7.1E-22 184.6 17.3 171 632-821 147-327 (333)
56 PRK13930 rod shape-determining 99.7 1.1E-16 2.5E-21 180.9 16.1 169 634-821 151-328 (335)
57 COG0849 ftsA Cell division ATP 99.7 7.4E-16 1.6E-20 172.4 20.9 250 65-365 86-381 (418)
58 PRK15080 ethanolamine utilizat 99.6 9.7E-15 2.1E-19 158.0 13.7 131 637-819 137-267 (267)
59 TIGR01174 ftsA cell division p 99.6 1.1E-14 2.4E-19 166.6 13.0 159 632-818 193-371 (371)
60 TIGR02529 EutJ ethanolamine ut 99.6 1.7E-14 3.7E-19 153.3 13.2 129 637-817 110-238 (239)
61 PRK09472 ftsA cell division pr 99.5 9.4E-14 2E-18 160.6 13.6 163 632-821 201-388 (420)
62 PF06723 MreB_Mbl: MreB/Mbl pr 99.5 2.1E-13 4.6E-18 149.3 14.8 167 632-819 142-319 (326)
63 COG4820 EutJ Ethanolamine util 99.5 3.1E-14 6.6E-19 137.1 6.2 192 101-360 79-270 (277)
64 cd00012 ACTIN Actin; An ubiqui 99.3 2.6E-11 5.7E-16 139.1 17.2 245 81-364 69-347 (371)
65 COG0849 ftsA Cell division ATP 99.3 2.1E-11 4.6E-16 136.9 14.5 173 624-822 192-381 (418)
66 COG1077 MreB Actin-like ATPase 99.3 3.5E-11 7.6E-16 126.3 13.0 170 635-823 153-333 (342)
67 smart00268 ACTIN Actin. ACTIN 99.2 7.4E-11 1.6E-15 135.6 15.4 245 77-363 65-346 (373)
68 PRK13917 plasmid segregation p 99.2 6.1E-10 1.3E-14 125.1 22.2 216 114-367 109-339 (344)
69 TIGR03739 PRTRC_D PRTRC system 99.0 1.2E-08 2.6E-13 114.2 18.0 209 114-362 101-318 (320)
70 PTZ00280 Actin-related protein 98.9 5.6E-08 1.2E-12 112.9 20.4 232 79-339 74-336 (414)
71 TIGR01175 pilM type IV pilus a 98.9 2.1E-08 4.6E-13 114.1 16.5 165 127-343 141-309 (348)
72 PF00022 Actin: Actin; InterP 98.9 2.1E-08 4.5E-13 116.3 14.5 226 115-364 94-367 (393)
73 PF11104 PilM_2: Type IV pilus 98.8 3.8E-08 8.3E-13 111.2 12.3 183 129-362 136-339 (340)
74 PF06406 StbA: StbA protein; 98.7 1.1E-07 2.3E-12 106.2 13.0 174 144-359 141-316 (318)
75 PRK13917 plasmid segregation p 98.7 1.7E-07 3.7E-12 105.5 13.8 157 633-824 183-339 (344)
76 PTZ00281 actin; Provisional 98.7 4.3E-07 9.4E-12 104.0 16.9 218 115-363 101-349 (376)
77 PTZ00004 actin-2; Provisional 98.6 7.9E-07 1.7E-11 102.0 17.7 217 115-363 101-351 (378)
78 PTZ00452 actin; Provisional 98.6 2.8E-06 6.1E-11 97.0 21.1 217 115-363 100-348 (375)
79 PTZ00466 actin-like protein; P 98.5 3.3E-06 7.1E-11 96.6 19.1 242 79-363 79-353 (380)
80 TIGR00241 CoA_E_activ CoA-subs 98.4 4.9E-06 1.1E-10 89.6 13.8 170 147-361 73-248 (248)
81 COG4972 PilM Tfp pilus assembl 98.4 3.5E-05 7.7E-10 81.8 19.5 168 132-352 152-322 (354)
82 PF07520 SrfB: Virulence facto 98.3 6.7E-05 1.5E-09 91.3 22.2 272 81-366 415-836 (1002)
83 PF11104 PilM_2: Type IV pilus 98.3 6.9E-06 1.5E-10 92.9 12.8 140 634-819 179-339 (340)
84 cd00012 ACTIN Actin; An ubiqui 98.2 2.8E-06 6.1E-11 97.6 9.2 168 635-821 143-347 (371)
85 TIGR01175 pilM type IV pilus a 98.2 1.4E-05 3E-10 91.1 12.8 117 636-797 189-307 (348)
86 KOG0679|consensus 98.2 0.00024 5.1E-09 76.7 20.8 122 81-229 80-202 (426)
87 TIGR03739 PRTRC_D PRTRC system 98.0 3.1E-05 6.8E-10 86.7 11.5 154 633-819 165-318 (320)
88 PF08841 DDR: Diol dehydratase 98.0 0.00012 2.6E-09 75.7 13.3 190 139-362 106-329 (332)
89 smart00268 ACTIN Actin. ACTIN 98.0 1.4E-05 3E-10 92.0 7.5 169 634-821 142-347 (373)
90 PF06406 StbA: StbA protein; 97.9 6.6E-05 1.4E-09 83.9 10.6 155 631-816 160-316 (318)
91 TIGR00241 CoA_E_activ CoA-subs 97.7 9.8E-05 2.1E-09 79.5 8.4 152 638-817 94-247 (248)
92 COG5277 Actin and related prot 97.7 0.0018 3.8E-08 74.8 18.1 97 116-229 107-204 (444)
93 PTZ00280 Actin-related protein 97.6 0.00029 6.3E-09 82.0 11.8 151 634-797 159-337 (414)
94 PF00022 Actin: Actin; InterP 97.6 0.00015 3.3E-09 84.1 9.2 177 636-821 143-367 (393)
95 COG4820 EutJ Ethanolamine util 97.6 7.1E-05 1.5E-09 73.3 4.6 129 637-817 142-270 (277)
96 TIGR03192 benz_CoA_bzdQ benzoy 97.5 0.0043 9.3E-08 66.9 18.0 70 290-364 218-288 (293)
97 PTZ00281 actin; Provisional 97.4 0.00074 1.6E-08 77.4 10.3 167 635-820 149-349 (376)
98 PTZ00452 actin; Provisional 97.4 0.00075 1.6E-08 77.2 10.2 167 635-820 148-348 (375)
99 PRK10719 eutA reactivating fac 97.3 0.00025 5.4E-09 80.2 5.8 82 117-220 90-183 (475)
100 TIGR02261 benz_CoA_red_D benzo 97.3 0.006 1.3E-07 64.9 15.6 71 289-362 188-262 (262)
101 PF08841 DDR: Diol dehydratase 97.3 0.0016 3.4E-08 67.7 10.5 49 771-819 274-329 (332)
102 TIGR03286 methan_mark_15 putat 97.3 0.0063 1.4E-07 68.2 16.0 46 317-363 357-402 (404)
103 PTZ00466 actin-like protein; P 97.3 0.002 4.3E-08 73.9 12.5 167 635-820 154-353 (380)
104 PTZ00004 actin-2; Provisional 97.3 0.00097 2.1E-08 76.6 9.5 168 635-820 149-351 (378)
105 COG4457 SrfB Uncharacterized p 97.2 0.036 7.7E-07 64.0 20.5 54 313-366 776-848 (1014)
106 TIGR02259 benz_CoA_red_A benzo 97.2 0.0066 1.4E-07 67.2 14.1 70 290-362 359-432 (432)
107 COG1924 Activator of 2-hydroxy 97.2 0.023 5.1E-07 62.1 18.0 74 287-365 317-391 (396)
108 PF07520 SrfB: Virulence facto 97.0 0.016 3.5E-07 71.3 16.4 84 734-822 730-835 (1002)
109 PRK13317 pantothenate kinase; 96.8 0.0097 2.1E-07 64.6 11.9 49 772-820 222-273 (277)
110 COG1924 Activator of 2-hydroxy 96.8 0.0039 8.4E-08 68.0 8.6 157 638-821 232-390 (396)
111 PRK13317 pantothenate kinase; 96.7 0.031 6.6E-07 60.8 14.2 49 315-363 222-273 (277)
112 TIGR02261 benz_CoA_red_D benzo 96.7 0.022 4.7E-07 60.7 12.6 70 747-819 189-262 (262)
113 KOG0676|consensus 96.6 0.027 5.9E-07 62.8 13.1 116 83-228 75-192 (372)
114 TIGR02259 benz_CoA_red_A benzo 96.5 0.026 5.7E-07 62.6 12.5 46 774-819 383-432 (432)
115 COG4972 PilM Tfp pilus assembl 96.4 0.031 6.7E-07 60.1 12.0 116 637-797 195-312 (354)
116 TIGR03286 methan_mark_15 putat 96.4 0.021 4.5E-07 64.2 11.1 46 774-820 357-402 (404)
117 PF02782 FGGY_C: FGGY family o 96.2 0.0091 2E-07 61.9 6.8 75 288-364 121-196 (198)
118 KOG0797|consensus 96.1 0.037 7.9E-07 62.3 10.5 121 81-228 195-322 (618)
119 KOG0677|consensus 96.0 0.049 1.1E-06 55.9 10.2 237 100-367 83-364 (389)
120 TIGR03192 benz_CoA_bzdQ benzoy 95.8 0.022 4.8E-07 61.5 7.0 70 747-821 218-288 (293)
121 PF02782 FGGY_C: FGGY family o 95.6 0.015 3.2E-07 60.3 5.2 76 744-821 120-196 (198)
122 COG5277 Actin and related prot 95.4 0.049 1.1E-06 63.1 8.7 48 773-820 363-417 (444)
123 PRK10719 eutA reactivating fac 95.1 0.014 3E-07 66.4 3.0 117 632-785 143-268 (475)
124 COG1069 AraB Ribulose kinase [ 95.1 0.24 5.2E-06 57.1 12.7 180 180-367 270-481 (544)
125 PF14450 FtsA: Cell division p 95.0 0.054 1.2E-06 51.1 6.2 52 180-231 1-57 (120)
126 PLN02669 xylulokinase 94.9 0.075 1.6E-06 64.2 8.8 72 290-364 421-492 (556)
127 PRK15027 xylulokinase; Provisi 94.9 0.069 1.5E-06 63.7 8.4 80 283-367 357-437 (484)
128 TIGR01315 5C_CHO_kinase FGGY-f 94.8 0.073 1.6E-06 64.3 8.5 85 281-367 409-493 (541)
129 PF01968 Hydantoinase_A: Hydan 94.4 0.088 1.9E-06 57.9 7.1 69 289-360 215-283 (290)
130 PRK15027 xylulokinase; Provisi 94.3 0.085 1.8E-06 62.9 7.3 78 740-824 357-437 (484)
131 PLN02669 xylulokinase 94.3 0.1 2.3E-06 62.9 8.1 72 747-821 421-492 (556)
132 PF06277 EutA: Ethanolamine ut 94.3 0.067 1.5E-06 61.0 5.7 74 589-675 101-178 (473)
133 PRK00047 glpK glycerol kinase; 94.0 0.14 3E-06 61.4 8.0 51 315-367 403-453 (498)
134 TIGR01315 5C_CHO_kinase FGGY-f 93.9 0.11 2.3E-06 62.9 7.1 83 740-824 411-493 (541)
135 PRK04123 ribulokinase; Provisi 93.9 0.13 2.8E-06 62.4 7.9 73 290-367 413-489 (548)
136 TIGR01311 glycerol_kin glycero 93.8 0.13 2.9E-06 61.4 7.7 51 315-367 399-449 (493)
137 TIGR01312 XylB D-xylulose kina 93.7 0.18 3.8E-06 60.3 8.5 51 315-367 390-440 (481)
138 TIGR02628 fuculo_kin_coli L-fu 93.6 0.17 3.7E-06 60.0 7.8 74 290-367 367-443 (465)
139 PTZ00294 glycerol kinase-like 93.5 0.19 4.1E-06 60.3 8.2 50 316-367 407-456 (504)
140 PRK10331 L-fuculokinase; Provi 93.5 0.18 3.9E-06 59.9 7.9 51 315-367 389-439 (470)
141 COG1069 AraB Ribulose kinase [ 93.5 0.74 1.6E-05 53.2 12.1 181 636-824 269-481 (544)
142 TIGR01234 L-ribulokinase L-rib 93.3 0.22 4.9E-06 60.1 8.4 51 315-367 435-486 (536)
143 PLN02295 glycerol kinase 92.9 0.26 5.6E-06 59.3 8.1 51 315-367 412-462 (512)
144 KOG0679|consensus 92.8 0.35 7.6E-06 53.0 7.9 49 635-686 154-202 (426)
145 TIGR00555 panK_eukar pantothen 92.8 0.63 1.4E-05 50.4 9.9 154 635-817 101-278 (279)
146 TIGR01314 gntK_FGGY gluconate 92.6 0.3 6.6E-06 58.6 8.2 51 315-367 401-451 (505)
147 PRK00047 glpK glycerol kinase; 92.6 0.23 5.1E-06 59.4 7.2 78 745-824 375-453 (498)
148 TIGR01311 glycerol_kin glycero 92.6 0.21 4.6E-06 59.7 6.8 77 746-824 372-449 (493)
149 TIGR02627 rhamnulo_kin rhamnul 92.6 0.26 5.7E-06 58.2 7.5 50 315-367 387-436 (454)
150 TIGR01312 XylB D-xylulose kina 92.5 0.28 6.2E-06 58.5 7.7 78 745-824 362-440 (481)
151 PRK04123 ribulokinase; Provisi 92.4 0.27 5.9E-06 59.6 7.5 77 746-824 412-489 (548)
152 TIGR01234 L-ribulokinase L-rib 92.4 0.29 6.2E-06 59.2 7.6 76 747-824 410-486 (536)
153 TIGR02628 fuculo_kin_coli L-fu 92.3 0.25 5.5E-06 58.5 6.8 76 745-824 365-443 (465)
154 COG4457 SrfB Uncharacterized p 92.3 2.1 4.6E-05 50.1 13.5 83 736-823 744-848 (1014)
155 PF14450 FtsA: Cell division p 92.3 0.42 9.2E-06 45.0 7.0 47 637-683 1-52 (120)
156 KOG2531|consensus 92.3 0.44 9.5E-06 53.4 7.9 56 307-364 434-489 (545)
157 PTZ00294 glycerol kinase-like 92.2 0.28 6E-06 58.9 7.1 77 746-824 379-456 (504)
158 PRK10939 autoinducer-2 (AI-2) 92.2 0.32 7E-06 58.6 7.7 51 315-367 409-459 (520)
159 TIGR00555 panK_eukar pantothen 92.0 2.6 5.6E-05 45.8 13.4 72 288-360 204-278 (279)
160 PF01869 BcrAD_BadFG: BadF/Bad 92.0 5 0.00011 43.8 16.1 71 289-362 197-271 (271)
161 KOG0676|consensus 91.9 0.12 2.5E-06 58.0 3.1 49 772-820 290-345 (372)
162 KOG2517|consensus 91.9 0.49 1.1E-05 55.0 8.2 73 293-367 391-464 (516)
163 PRK10331 L-fuculokinase; Provi 91.8 0.33 7.1E-06 57.7 7.0 76 747-824 363-439 (470)
164 PRK10640 rhaB rhamnulokinase; 91.8 0.37 8.1E-06 57.1 7.4 50 315-367 375-424 (471)
165 TIGR01314 gntK_FGGY gluconate 91.6 0.38 8.3E-06 57.7 7.3 78 745-824 373-451 (505)
166 KOG0680|consensus 91.4 4.2 9E-05 43.9 13.5 105 115-227 93-198 (400)
167 PLN02295 glycerol kinase 90.8 0.49 1.1E-05 56.8 7.2 78 745-824 379-462 (512)
168 PRK10939 autoinducer-2 (AI-2) 90.6 0.49 1.1E-05 57.0 7.0 51 772-824 409-459 (520)
169 KOG2517|consensus 90.6 0.58 1.3E-05 54.4 7.1 77 747-825 388-465 (516)
170 COG1070 XylB Sugar (pentulose 90.6 1 2.3E-05 53.8 9.7 78 283-365 371-449 (502)
171 TIGR02627 rhamnulo_kin rhamnul 90.4 0.44 9.5E-06 56.3 6.2 50 772-824 387-436 (454)
172 PF01968 Hydantoinase_A: Hydan 90.3 0.81 1.8E-05 50.4 7.7 64 751-817 220-283 (290)
173 KOG2531|consensus 90.0 0.71 1.5E-05 51.8 6.8 55 765-821 435-489 (545)
174 KOG0681|consensus 89.4 0.35 7.7E-06 55.2 4.0 67 298-364 539-614 (645)
175 PRK10640 rhaB rhamnulokinase; 88.9 0.64 1.4E-05 55.2 6.1 50 772-824 375-424 (471)
176 PRK11031 guanosine pentaphosph 85.1 1.8 3.8E-05 51.6 6.9 77 131-222 94-171 (496)
177 PF07318 DUF1464: Protein of u 85.0 8.5 0.00019 42.6 11.3 70 293-367 242-318 (343)
178 PF02543 CmcH_NodU: Carbamoylt 84.9 75 0.0016 36.2 19.4 83 280-367 131-216 (360)
179 COG1070 XylB Sugar (pentulose 84.5 2 4.4E-05 51.4 7.0 77 740-823 371-450 (502)
180 KOG0681|consensus 84.2 0.86 1.9E-05 52.2 3.4 49 773-821 559-614 (645)
181 COG0248 GppA Exopolyphosphatas 83.0 8.9 0.00019 45.3 11.2 84 101-197 59-148 (492)
182 PF02541 Ppx-GppA: Ppx/GppA ph 82.2 2.1 4.5E-05 47.2 5.5 74 134-222 77-151 (285)
183 PRK10854 exopolyphosphatase; P 81.7 3.6 7.9E-05 49.3 7.7 76 132-222 100-176 (513)
184 TIGR00744 ROK_glcA_fam ROK fam 80.5 37 0.00081 37.8 15.0 71 114-195 57-140 (318)
185 PLN02666 5-oxoprolinase 80.1 16 0.00034 48.4 12.9 77 282-361 454-531 (1275)
186 PLN02920 pantothenate kinase 1 80.0 15 0.00032 41.5 11.0 50 770-819 295-350 (398)
187 TIGR03706 exo_poly_only exopol 79.5 6.4 0.00014 43.6 8.2 54 133-197 90-144 (300)
188 COG3426 Butyrate kinase [Energ 79.3 11 0.00024 40.1 9.0 49 312-360 293-344 (358)
189 PF01869 BcrAD_BadFG: BadF/Bad 79.2 4.4 9.5E-05 44.2 6.7 70 747-819 198-271 (271)
190 KOG0677|consensus 78.8 13 0.00028 38.8 9.2 173 637-824 151-364 (389)
191 KOG0680|consensus 78.6 17 0.00037 39.4 10.3 24 773-796 318-341 (400)
192 PF03702 UPF0075: Uncharacteri 78.3 8.1 0.00018 43.7 8.5 73 289-364 261-337 (364)
193 COG0554 GlpK Glycerol kinase [ 77.9 7 0.00015 44.9 7.8 74 289-367 375-452 (499)
194 PF07318 DUF1464: Protein of u 77.9 20 0.00044 39.8 11.1 54 770-824 258-318 (343)
195 PRK09585 anmK anhydro-N-acetyl 76.2 16 0.00035 41.3 10.1 67 294-364 268-338 (365)
196 PLN02666 5-oxoprolinase 75.9 14 0.0003 48.8 10.7 78 738-818 453-531 (1275)
197 PRK14878 UGMP family protein; 74.6 31 0.00068 38.6 12.0 24 773-796 242-265 (323)
198 PTZ00340 O-sialoglycoprotein e 71.6 68 0.0015 36.1 13.5 59 295-359 248-308 (345)
199 PRK14878 UGMP family protein; 70.7 54 0.0012 36.7 12.7 24 316-339 242-265 (323)
200 PLN02920 pantothenate kinase 1 69.5 89 0.0019 35.5 13.7 50 313-362 295-350 (398)
201 PF03702 UPF0075: Uncharacteri 68.3 12 0.00026 42.4 6.8 65 755-822 270-338 (364)
202 COG4819 EutA Ethanolamine util 67.5 4.2 9.2E-05 43.9 2.8 51 620-675 130-180 (473)
203 COG0533 QRI7 Metal-dependent p 66.1 79 0.0017 35.2 12.2 61 294-360 245-307 (342)
204 PF02541 Ppx-GppA: Ppx/GppA ph 65.9 14 0.00029 40.7 6.6 40 635-679 112-151 (285)
205 TIGR03281 methan_mark_12 putat 65.7 34 0.00074 37.2 9.1 49 316-367 263-314 (326)
206 TIGR03281 methan_mark_12 putat 64.7 19 0.00042 39.0 7.0 49 773-824 263-314 (326)
207 COG0554 GlpK Glycerol kinase [ 63.4 18 0.00038 41.8 6.8 83 737-824 365-452 (499)
208 PTZ00340 O-sialoglycoprotein e 62.9 96 0.0021 34.9 12.5 39 753-796 249-287 (345)
209 PRK03011 butyrate kinase; Prov 62.4 15 0.00033 41.6 6.3 47 315-361 295-344 (358)
210 PF02543 CmcH_NodU: Carbamoylt 61.6 1.2E+02 0.0026 34.6 13.2 83 737-824 131-216 (360)
211 COG0145 HyuA N-methylhydantoin 60.7 10 0.00022 46.6 4.7 42 146-197 256-297 (674)
212 PF06277 EutA: Ethanolamine ut 59.6 20 0.00044 41.5 6.5 88 118-218 88-178 (473)
213 PF00349 Hexokinase_1: Hexokin 58.7 31 0.00067 35.8 7.2 55 632-688 60-118 (206)
214 COG2377 Predicted molecular ch 58.0 63 0.0014 36.2 9.7 54 312-365 287-344 (371)
215 PRK09604 UGMP family protein; 57.2 3.2E+02 0.007 30.7 20.2 48 315-362 254-306 (332)
216 PF08735 DUF1786: Putative pyr 56.5 90 0.0019 33.3 10.2 72 112-195 111-184 (254)
217 TIGR00143 hypF [NiFe] hydrogen 55.0 27 0.00059 43.4 7.1 49 315-363 658-711 (711)
218 COG2377 Predicted molecular ch 53.1 1.9E+02 0.0042 32.5 12.4 55 768-822 286-344 (371)
219 TIGR03123 one_C_unchar_1 proba 52.6 9.7 0.00021 42.2 2.5 20 634-653 127-146 (318)
220 PRK00976 hypothetical protein; 51.9 57 0.0012 36.2 8.2 50 315-367 263-314 (326)
221 PF03630 Fumble: Fumble ; Int 51.8 1.1E+02 0.0023 34.6 10.5 156 630-819 151-340 (341)
222 cd06007 R3H_DEXH_helicase R3H 50.8 44 0.00096 26.9 5.3 37 107-145 8-44 (59)
223 PRK09585 anmK anhydro-N-acetyl 50.1 42 0.00091 38.1 7.0 48 773-821 287-338 (365)
224 cd02640 R3H_NRF R3H domain of 48.2 56 0.0012 26.5 5.5 42 103-145 4-45 (60)
225 KOG0797|consensus 47.3 20 0.00043 41.3 3.9 50 773-822 527-590 (618)
226 TIGR03123 one_C_unchar_1 proba 47.2 13 0.00028 41.3 2.3 19 179-197 129-147 (318)
227 KOG2708|consensus 46.8 1.7E+02 0.0038 30.3 9.9 65 292-361 236-301 (336)
228 COG0533 QRI7 Metal-dependent p 46.8 82 0.0018 35.1 8.4 51 741-796 231-285 (342)
229 PRK00976 hypothetical protein; 46.4 42 0.00092 37.2 6.1 50 772-824 263-314 (326)
230 PF14574 DUF4445: Domain of un 46.2 45 0.00097 38.5 6.6 86 276-362 289-375 (412)
231 COG0248 GppA Exopolyphosphatas 46.1 33 0.00072 40.6 5.7 20 634-653 128-147 (492)
232 PRK11031 guanosine pentaphosph 46.1 27 0.00058 41.7 5.0 38 636-678 133-170 (496)
233 PRK03011 butyrate kinase; Prov 45.8 23 0.00049 40.3 4.1 46 772-817 295-343 (358)
234 PRK10854 exopolyphosphatase; P 42.3 28 0.0006 41.8 4.4 19 635-653 137-155 (513)
235 COG0145 HyuA N-methylhydantoin 40.0 24 0.00053 43.4 3.4 18 636-653 279-296 (674)
236 COG5026 Hexokinase [Carbohydra 39.0 1.2E+02 0.0026 34.8 8.2 32 632-663 72-104 (466)
237 COG1521 Pantothenate kinase ty 38.7 75 0.0016 34.0 6.4 44 284-327 181-224 (251)
238 PRK07058 acetate kinase; Provi 38.3 1.2E+02 0.0026 34.6 8.3 45 291-339 298-343 (396)
239 COG4012 Uncharacterized protei 38.3 2.1E+02 0.0047 30.4 9.3 85 122-226 186-273 (342)
240 TIGR00143 hypF [NiFe] hydrogen 38.2 33 0.00071 42.8 4.2 49 772-820 658-711 (711)
241 cd02646 R3H_G-patch R3H domain 37.9 90 0.002 25.0 5.3 42 101-145 2-43 (58)
242 PTZ00107 hexokinase; Provision 35.5 3.8E+02 0.0082 31.7 12.1 26 632-657 71-96 (464)
243 KOG1369|consensus 35.3 8.1E+02 0.018 28.9 15.5 28 631-658 82-109 (474)
244 cd02641 R3H_Smubp-2_like R3H d 34.8 1.2E+02 0.0026 24.6 5.6 43 102-145 3-45 (60)
245 PF10458 Val_tRNA-synt_C: Valy 34.2 1.5E+02 0.0032 24.5 6.2 45 520-564 9-53 (66)
246 TIGR03723 bact_gcp putative gl 34.1 90 0.002 34.8 6.6 55 300-359 249-308 (314)
247 PRK09605 bifunctional UGMP fam 33.6 1.2E+02 0.0025 36.8 7.9 51 316-366 246-301 (535)
248 PF00349 Hexokinase_1: Hexokin 32.8 58 0.0013 33.8 4.4 30 176-205 61-91 (206)
249 PLN02914 hexokinase 32.3 2.6E+02 0.0057 33.2 10.1 25 632-656 92-116 (490)
250 KOG2413|consensus 31.4 1.1E+02 0.0024 36.5 6.6 17 634-650 396-416 (606)
251 PLN02377 3-ketoacyl-CoA syntha 30.6 1.3E+02 0.0029 35.8 7.4 54 287-340 165-219 (502)
252 PF03646 FlaG: FlaG protein; 29.7 79 0.0017 28.9 4.3 45 915-993 54-99 (107)
253 PLN02362 hexokinase 29.7 3.6E+02 0.0078 32.2 10.7 26 632-657 92-117 (509)
254 PRK12440 acetate kinase; Revie 29.2 7.3E+02 0.016 28.6 12.6 43 293-339 302-345 (397)
255 PLN02902 pantothenate kinase 29.1 1.4E+02 0.0031 37.5 7.4 49 770-819 344-399 (876)
256 KOG1385|consensus 28.9 55 0.0012 37.1 3.6 88 101-196 124-231 (453)
257 PRK07058 acetate kinase; Provi 28.5 4.6E+02 0.0099 30.2 10.8 42 751-796 301-343 (396)
258 COG2192 Predicted carbamoyl tr 28.3 1.1E+03 0.024 28.3 16.9 82 281-367 255-338 (555)
259 COG1548 Predicted transcriptio 28.0 54 0.0012 34.6 3.1 73 101-197 77-149 (330)
260 PRK13328 pantothenate kinase; 27.3 1.2E+02 0.0025 32.7 5.8 70 284-363 183-252 (255)
261 PLN02596 hexokinase-like 27.2 2.9E+02 0.0062 32.9 9.3 27 631-657 92-118 (490)
262 PTZ00297 pantothenate kinase; 26.9 4.5E+02 0.0099 35.9 12.1 50 770-819 1389-1444(1452)
263 PTZ00297 pantothenate kinase; 25.9 4.2E+02 0.0091 36.2 11.5 73 288-361 1365-1443(1452)
264 KOG2708|consensus 25.8 7.8E+02 0.017 25.7 13.3 66 749-819 236-302 (336)
265 PF02801 Ketoacyl-synt_C: Beta 25.4 1E+02 0.0022 28.7 4.3 47 752-798 24-72 (119)
266 PRK09604 UGMP family protein; 24.8 1E+02 0.0023 34.6 5.1 59 756-819 243-306 (332)
267 cd02639 R3H_RRM R3H domain of 24.2 1.3E+02 0.0029 24.3 4.1 30 117-146 17-46 (60)
268 PLN03173 chalcone synthase; Pr 24.1 2.5E+02 0.0054 32.4 8.1 48 293-340 101-149 (391)
269 PRK05082 N-acetylmannosamine k 23.7 2.6E+02 0.0056 30.6 7.9 48 315-362 233-286 (291)
270 KOG1385|consensus 23.7 62 0.0013 36.7 2.8 20 634-653 212-231 (453)
271 PLN03170 chalcone synthase; Pr 23.5 2.3E+02 0.005 32.8 7.6 51 291-341 103-154 (401)
272 TIGR03723 bact_gcp putative gl 23.2 1.3E+02 0.0027 33.6 5.2 56 756-816 248-308 (314)
273 PLN02377 3-ketoacyl-CoA syntha 22.9 1.7E+02 0.0036 35.0 6.3 51 748-798 169-220 (502)
274 COG4819 EutA Ethanolamine util 22.6 51 0.0011 36.0 1.8 87 118-217 90-179 (473)
275 PLN03172 chalcone synthase fam 22.6 2.8E+02 0.0061 32.0 8.1 51 290-340 98-149 (393)
276 PF08392 FAE1_CUT1_RppA: FAE1/ 22.5 2.1E+02 0.0045 31.3 6.4 43 755-797 87-130 (290)
277 PRK09557 fructokinase; Reviewe 22.4 1.5E+02 0.0032 32.8 5.6 48 315-362 244-299 (301)
278 COG4296 Uncharacterized protei 22.3 1.8E+02 0.0039 27.4 4.9 22 561-582 90-112 (156)
279 PRK08868 flagellar protein Fla 22.0 2.2E+02 0.0047 27.6 5.7 44 916-993 89-133 (144)
280 TIGR00744 ROK_glcA_fam ROK fam 21.9 1.3E+02 0.0029 33.4 5.2 49 772-820 251-309 (318)
281 PF08006 DUF1700: Protein of u 21.7 2.2E+02 0.0048 28.7 6.3 57 528-593 4-62 (181)
282 COG2192 Predicted carbamoyl tr 21.7 1.4E+03 0.031 27.4 13.2 81 738-823 255-337 (555)
283 PLN02405 hexokinase 21.7 6.3E+02 0.014 30.1 10.8 25 632-656 92-116 (497)
284 TIGR03706 exo_poly_only exopol 21.6 68 0.0015 35.5 2.7 17 637-653 127-143 (300)
285 PRK13310 N-acetyl-D-glucosamin 21.6 3E+02 0.0065 30.3 8.0 48 315-362 245-300 (303)
286 PRK09557 fructokinase; Reviewe 21.6 1.4E+02 0.0029 33.0 5.1 48 772-819 244-299 (301)
287 PLN02854 3-ketoacyl-CoA syntha 21.5 1.9E+02 0.0042 34.5 6.5 45 296-340 190-235 (521)
288 COG2441 Predicted butyrate kin 21.4 2.3E+02 0.005 30.4 6.2 53 315-367 273-335 (374)
289 PF08392 FAE1_CUT1_RppA: FAE1/ 21.3 1.9E+02 0.0041 31.6 5.8 44 297-340 86-130 (290)
290 PRK05082 N-acetylmannosamine k 21.3 1.5E+02 0.0032 32.6 5.3 48 772-819 233-286 (291)
291 TIGR00329 gcp_kae1 metallohydr 21.2 1.1E+02 0.0025 33.8 4.4 37 298-339 246-282 (305)
292 TIGR02707 butyr_kinase butyrat 20.9 1.3E+02 0.0028 34.1 4.8 45 315-359 293-340 (351)
293 COG2433 Uncharacterized conser 20.9 8.4E+02 0.018 29.5 11.1 70 516-600 448-517 (652)
294 PF02685 Glucokinase: Glucokin 20.5 8.1E+02 0.018 27.3 10.9 92 139-231 88-182 (316)
295 PRK13310 N-acetyl-D-glucosamin 20.3 1.5E+02 0.0032 32.8 5.1 48 772-819 245-300 (303)
296 PF02801 Ketoacyl-synt_C: Beta 20.2 1.1E+02 0.0024 28.4 3.5 46 296-341 25-72 (119)
297 PLN03168 chalcone synthase; Pr 20.0 3.1E+02 0.0068 31.6 7.8 52 289-340 96-148 (389)
No 1
>KOG0100|consensus
Probab=100.00 E-value=8e-112 Score=877.18 Aligned_cols=579 Identities=56% Similarity=0.862 Sum_probs=532.4
Q ss_pred CcccCCCCCeeEEeecccccccceeeccccc------cc-CCccccceeeEEEeccCeEEee--cCCCceee----e-ee
Q psy6736 1 MAIIHPDHPEVEITEEQSLLIQTSIMDLIGD------NL-GQGLIKPAFSGIRLEEGAVMLY--CSDGYTAG----W-IN 66 (1023)
Q Consensus 1 vav~~~~~p~~~~~~~~~~~~~pS~~~~~~~------~~-g~~~~~ps~v~~~~~~~~~~~G--~~~~~~~~----~-~k 66 (1023)
|+|+.|+...+ |.|+||+|.|||.+++.++ ++ .+....|.-.-++ -++ ++| .++....+ | |+
T Consensus 50 VgV~kNgrvEI-iANdQGNRItPSyVaFt~derLiGdAAKNQ~~~NPenTiFD--~KR-LIGr~~~d~~vq~Dik~~Pfk 125 (663)
T KOG0100|consen 50 VGVYKNGRVEI-IANDQGNRITPSYVAFTDDERLIGDAAKNQLTSNPENTIFD--AKR-LIGRKFNDKSVQKDIKFLPFK 125 (663)
T ss_pred EEEEeCCeEEE-EecCCCCccccceeeeccchhhhhhHhhcccccCcccceec--hHH-HhCcccCChhhhhhhhcCceE
Confidence 68999999999 9999999999999998843 33 3334455422122 111 223 11111111 1 11
Q ss_pred cccCCcC----cccc-ccccccCHHHHHhHhhhhccCcchHHHHHHHHHhCCcCCcceEecCCCCCHHHHHHHHHHHHHc
Q psy6736 67 SITGDLT----PWDG-ARLKAVSAQELSRGVKAIFTAPDILKKKTSEDILRKVDGQNEGLIPAYFNISSVKSTKDSGTIA 141 (1023)
Q Consensus 67 ~~~g~~~----~~~~-~~~~~~~~~~v~a~~L~~~~~~~~~l~~~a~~~~~~~~~~~vitVPa~~~~~qr~~l~~Aa~~A 141 (1023)
-...+.+ +.+. +..+.|+|++++||+| .++++.|++++|.+++++|+||||||++.|||++++|..+|
T Consensus 126 vv~k~~kp~i~v~v~~g~~K~FtPeEiSaMiL-------~KMKe~AEayLGkkv~~AVvTvPAYFNDAQrQATKDAGtIA 198 (663)
T KOG0100|consen 126 VVNKDGKPYIQVKVGGGETKVFTPEEISAMIL-------TKMKETAEAYLGKKVTHAVVTVPAYFNDAQRQATKDAGTIA 198 (663)
T ss_pred EEcCCCCccEEEEccCCcccccCHHHHHHHHH-------HHHHHHHHHHhCCcccceEEecchhcchHHHhhhcccceec
Confidence 1112222 2333 3467899999999999 99999999999999999999999999999999999999999
Q ss_pred CCceeeeecchHHHHHHhccccccCccccccCCCCCcEEEEEEeCCceEEEEEEEEeCCEEEEEEecCCCCccHHHHHHH
Q psy6736 142 GLNVLRIINEPTAAAIAYGLDKKVGSTAVEYNGSGERNVLIFDLGGGTFDVSILTIEDGIFEVKSTAGDTHLGGEDFDNR 221 (1023)
Q Consensus 142 Gl~~~~li~Ep~AAal~y~~~~~~~~~~~~~~~~~~~~vlV~D~GggT~dvsv~~~~~~~~~v~~~~~~~~lGG~~~D~~ 221 (1023)
||+++|+||||+|||++|+++... .++++||||+||||||+|++.+.+++|+|++++||.++||+|||++
T Consensus 199 gLnV~RIiNePTaAAIAYGLDKk~----------gEknilVfDLGGGTFDVSlLtIdnGVFeVlaTnGDThLGGEDFD~r 268 (663)
T KOG0100|consen 199 GLNVVRIINEPTAAAIAYGLDKKD----------GEKNILVFDLGGGTFDVSLLTIDNGVFEVLATNGDTHLGGEDFDQR 268 (663)
T ss_pred cceEEEeecCccHHHHHhcccccC----------CcceEEEEEcCCceEEEEEEEEcCceEEEEecCCCcccCccchHHH
Confidence 999999999999999999998762 5789999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhhhccCccccHHHHHHHHHHHHHHhHHcCCCCceEEEEecccCCceeEEEecHHHHHHHhHHHHHHHHHH
Q psy6736 222 MVNHFVQEFKRKYKKDLTTNKRALRRLRTACERAKRTLSSSTQASIEIDSLFEGVDFYTSITRARFEELNADLFRGTMEP 301 (1023)
Q Consensus 222 l~~~l~~~~~~~~~~~~~~~~~~~~~L~~~ae~~K~~Ls~~~~~~i~i~~~~~~~~~~~~itr~~~e~~~~~~~~~i~~~ 301 (1023)
+++||.+.|+++++.++..+.+++.+|+++||+||+.||++.++.+.|+++++|.||+-++||+.||++.-++|..++.|
T Consensus 269 vm~~fiklykkK~gkDv~kdnkA~~KLrRe~EkAKRaLSsqhq~riEIeS~fdG~DfSEtLtRAkFEElNmDLFr~TlkP 348 (663)
T KOG0100|consen 269 VMEYFIKLYKKKHGKDVRKDNKAVQKLRREVEKAKRALSSQHQVRIEIESLFDGVDFSETLTRAKFEELNMDLFRKTLKP 348 (663)
T ss_pred HHHHHHHHHhhhcCCccchhhHHHHHHHHHHHHHHhhhccccceEEeeeeccccccccchhhhhHHHHhhhHHHHHhhHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHcCCCccCcCeEEEEcCCCCcHHHHHHHHHHcCCccccccCCCchhHHhHHHHHHHHHhCCCCcceeeeEEeee
Q psy6736 302 VEKSLRDAKMDKAQIHDIVLVGGSTRIPKVQKLLQDFFNGKELNKSINPDEAVAYGAAVQAAILHGDKSEEVQDLLLLDV 381 (1023)
Q Consensus 302 i~~~l~~~~~~~~~i~~V~LvGG~sr~p~v~~~l~~~f~~~~i~~~~~pd~aVa~GAa~~a~~l~~~~~~~~~~~~~~d~ 381 (1023)
+.++|+++++.+.||+.|+||||++|||.||++|+++|+|+++...+|||||||+|||.+|..+++ .....++++.|+
T Consensus 349 v~kvl~Ds~lkKsdideiVLVGGsTrIPKvQqllk~fF~GKepskGinPdEAVAYGAAVQaGvlsG--ee~t~divLLDv 426 (663)
T KOG0100|consen 349 VQKVLEDSDLKKSDIDEIVLVGGSTRIPKVQQLLKDFFNGKEPSKGINPDEAVAYGAAVQAGVLSG--EEDTGDIVLLDV 426 (663)
T ss_pred HHHHHhhcCcccccCceEEEecCcccChhHHHHHHHHhCCCCccCCCChHHHHHhhhhhhhccccc--ccCcCcEEEEee
Confidence 999999999999999999999999999999999999999999999999999999999999999998 456889999999
Q ss_pred ccccceEEecCceEEEEEecCCCCCCceEEEEEeccCCCCcEEEEEeecCccccccCceeeEEEecCCCCCCCCCCeEEE
Q psy6736 382 TPLSLGIETAGGVMTALIKRNTTIPTKQTQTFTTYSDNQPGVLIQVYEGERAMTKDNNLLGKFELTSIPPAPRGVPQIEV 461 (1023)
Q Consensus 382 ~~~sigi~~~~~~~~~ii~~~t~ip~~~~~~~~~~~d~q~~~~i~i~~g~~~~~~~~~~lg~~~i~~~~~~~~g~~~i~v 461 (1023)
+|+++||++.+|.|..+|||||.+|++++..|+|+.|+|+.+.|.+|+|++.+.++|..+|+|.+.|+||+|+|.|+|+|
T Consensus 427 ~pLtlGIETvGGVMTklI~RNTviPTkKSQvFsTa~DnQ~tV~I~vyEGER~mtkdn~lLGkFdltGipPAPRGvpqIEV 506 (663)
T KOG0100|consen 427 NPLTLGIETVGGVMTKLIPRNTVIPTKKSQVFSTAQDNQPTVTIQVYEGERPMTKDNHLLGKFDLTGIPPAPRGVPQIEV 506 (663)
T ss_pred ccccceeeeecceeeccccCCcccCccccceeeecccCCceEEEEEeeccccccccccccccccccCCCCCCCCCccEEE
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEEEcCCcceEEEEEeccCCcceeEEEecCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHhhhhh-
Q psy6736 462 TFDIDANGILNVTAIEKSTGKENKITITNDRGRLSKEDIERMVNDAEKYKAEDEKQKAVISAKNSLESYCFNMKSTVED- 540 (1023)
Q Consensus 462 ~f~~d~~g~l~v~~~~~~t~~~~~~~i~~~~~~ls~~~~~~~~~~~~~~~~~d~~~~~~~~a~N~lE~~iy~~~~~l~~- 540 (1023)
+|.+|.||+|+|++.++.+|++++++|+++.++||+++|++|++..++|.++|+..+++.++||+||+|.|++++.+.+
T Consensus 507 tFevDangiL~VsAeDKgtg~~~kitItNd~~rLt~EdIerMv~eAekFAeeDk~~KekieaRN~LE~YayslKnqi~dk 586 (663)
T KOG0100|consen 507 TFEVDANGILQVSAEDKGTGKKEKITITNDKGRLTPEDIERMVNEAEKFAEEDKKLKEKIEARNELESYAYSLKNQIGDK 586 (663)
T ss_pred EEEEccCceEEEEeeccCCCCcceEEEecCCCCCCHHHHHHHHHHHHHHhhhhHHHHHHHHhHHHHHHHHHHhhhccCch
Confidence 9999999999999999999999999999999999999999999999999999999999999999999999999999987
Q ss_pred hhhhccCCHHHHHHHHHhhHHHHHHHhhCCccCHHHHHHHHHHHHHHHHHHHHHHHcccCCC
Q psy6736 541 EKLKDKISDAERTQILDKCNDVIKWLDANQLAEKEEFEHKQKELEAICNPIITKLYQGSGGA 602 (1023)
Q Consensus 541 ~~~~~~~~~~e~~~l~~~l~~~~~WL~~~~~a~~~~~~~kl~~L~~~~~pi~~r~~e~~g~~ 602 (1023)
+.+...+++++++.+..++++..+||+++.+|++++|.+++++|+..+.||..+++..+|++
T Consensus 587 ekLg~Kl~~edKe~~e~av~e~~eWL~~n~~a~~Ee~~ek~kele~vv~PiisklY~~ag~~ 648 (663)
T KOG0100|consen 587 EKLGGKLSDEDKETIEDAVEEALEWLESNQDASKEEFKEKKKELEAVVQPIISKLYGGAGGA 648 (663)
T ss_pred hHhcccCChhHHHHHHHHHHHHHHHHhhcccccHHHHHHHHHHHHHHHHHHHHHHhhhcCCC
Confidence 56889999999999999999999999999999999999999999999999999999988754
No 2
>PTZ00009 heat shock 70 kDa protein; Provisional
Probab=100.00 E-value=9.7e-90 Score=829.74 Aligned_cols=595 Identities=65% Similarity=0.959 Sum_probs=532.3
Q ss_pred CcccCCCCCeeEEeecccccccceeecccccccCCccccceeeEEEeccCeEEee--------cCCCceeeeeecccCCc
Q psy6736 1 MAIIHPDHPEVEITEEQSLLIQTSIMDLIGDNLGQGLIKPAFSGIRLEEGAVMLY--------CSDGYTAGWINSITGDL 72 (1023)
Q Consensus 1 vav~~~~~p~~~~~~~~~~~~~pS~~~~~~~~~g~~~~~ps~v~~~~~~~~~~~G--------~~~~~~~~~~k~~~g~~ 72 (1023)
||+|.++.|.+ |.|++|++.|||++.+..+ ..++| ..|..++..||+++|..
T Consensus 18 va~~~~g~~~i-i~n~~g~r~tPS~V~f~~~-------------------~~~vG~~A~~~~~~~p~~ti~~~KrliG~~ 77 (653)
T PTZ00009 18 VGVWKNENVEI-IANDQGNRTTPSYVAFTDT-------------------ERLIGDAAKNQVARNPENTVFDAKRLIGRK 77 (653)
T ss_pred EEEEeCCceEE-EECCCCCccCCcEEEECCC-------------------CEEEcHHHHHhhhhCcccEEhhhHHHhCCC
Confidence 57888888888 8888888888888777521 11223 45667777788888763
Q ss_pred C-------------------------cc--ccccccccCHHHHHhHhhhhccCcchHHHHHHHHHhCCcCCcceEecCCC
Q psy6736 73 T-------------------------PW--DGARLKAVSAQELSRGVKAIFTAPDILKKKTSEDILRKVDGQNEGLIPAY 125 (1023)
Q Consensus 73 ~-------------------------~~--~~~~~~~~~~~~v~a~~L~~~~~~~~~l~~~a~~~~~~~~~~~vitVPa~ 125 (1023)
. +. .......++|++|++++| ++|++.|+.++|.++.++|||||+|
T Consensus 78 ~~d~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~peel~a~iL-------~~lk~~ae~~~g~~v~~~VItVPa~ 150 (653)
T PTZ00009 78 FDDSVVQSDMKHWPFKVTTGGDDKPMIEVTYQGEKKTFHPEEISSMVL-------QKMKEIAEAYLGKQVKDAVVTVPAY 150 (653)
T ss_pred CCchhHhhhhhcCceEEEEcCCCceEEEEEeCCceEEECHHHHHHHHH-------HHHHHHHHHHhCCCcceeEEEeCCC
Confidence 1 00 011235799999999999 9999999999999999999999999
Q ss_pred CCHHHHHHHHHHHHHcCCceeeeecchHHHHHHhccccccCccccccCCCCCcEEEEEEeCCceEEEEEEEEeCCEEEEE
Q psy6736 126 FNISSVKSTKDSGTIAGLNVLRIINEPTAAAIAYGLDKKVGSTAVEYNGSGERNVLIFDLGGGTFDVSILTIEDGIFEVK 205 (1023)
Q Consensus 126 ~~~~qr~~l~~Aa~~AGl~~~~li~Ep~AAal~y~~~~~~~~~~~~~~~~~~~~vlV~D~GggT~dvsv~~~~~~~~~v~ 205 (1023)
|++.||+++++||++|||++++||+||+|||++|+...... .+.++|||||||||||+|++++.++.++++
T Consensus 151 f~~~qR~a~~~Aa~~AGl~v~~li~EptAAAl~y~~~~~~~---------~~~~vlv~D~GggT~dvsv~~~~~~~~~v~ 221 (653)
T PTZ00009 151 FNDSQRQATKDAGTIAGLNVLRIINEPTAAAIAYGLDKKGD---------GEKNVLIFDLGGGTFDVSLLTIEDGIFEVK 221 (653)
T ss_pred CCHHHHHHHHHHHHHcCCceeEEecchHHHHHHHhhhccCC---------CCCEEEEEECCCCeEEEEEEEEeCCeEEEE
Confidence 99999999999999999999999999999999999765311 467899999999999999999999999999
Q ss_pred EecCCCCccHHHHHHHHHHHHHHHHHhhh-ccCccccHHHHHHHHHHHHHHhHHcCCCCceEEEEecccCCceeEEEecH
Q psy6736 206 STAGDTHLGGEDFDNRMVNHFVQEFKRKY-KKDLTTNKRALRRLRTACERAKRTLSSSTQASIEIDSLFEGVDFYTSITR 284 (1023)
Q Consensus 206 ~~~~~~~lGG~~~D~~l~~~l~~~~~~~~-~~~~~~~~~~~~~L~~~ae~~K~~Ls~~~~~~i~i~~~~~~~~~~~~itr 284 (1023)
++.||.++||.+||.+|++|+.++|..++ +.++..+++++.+|+.+||++|+.||.+.++.+.+++++++.++.++|||
T Consensus 222 a~~gd~~lGG~d~D~~l~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~aEkaK~~LS~~~~~~i~i~~~~~~~d~~~~itR 301 (653)
T PTZ00009 222 ATAGDTHLGGEDFDNRLVEFCVQDFKRKNRGKDLSSNQRALRRLRTQCERAKRTLSSSTQATIEIDSLFEGIDYNVTISR 301 (653)
T ss_pred EecCCCCCChHHHHHHHHHHHHHHHHHhccCCCCccCHHHHHHHHHHHHHHHHhCCCCceEEEEEEeccCCceEEEEECH
Confidence 99999999999999999999999998776 36777889999999999999999999999999999999999999999999
Q ss_pred HHHHHHhHHHHHHHHHHHHHHHHHcCCCccCcCeEEEEcCCCCcHHHHHHHHHHcCCccccccCCCchhHHhHHHHHHHH
Q psy6736 285 ARFEELNADLFRGTMEPVEKSLRDAKMDKAQIHDIVLVGGSTRIPKVQKLLQDFFNGKELNKSINPDEAVAYGAAVQAAI 364 (1023)
Q Consensus 285 ~~~e~~~~~~~~~i~~~i~~~l~~~~~~~~~i~~V~LvGG~sr~p~v~~~l~~~f~~~~i~~~~~pd~aVa~GAa~~a~~ 364 (1023)
++|+++++|+++++..+|+++|+++++.+.+|+.|+||||+||+|+|+++|+++|++.++...+|||+|||+|||++|++
T Consensus 302 ~~fe~l~~~l~~~~~~~i~~~L~~a~~~~~~i~~ViLvGGssriP~v~~~i~~~f~~~~~~~~~npdeaVA~GAa~~aa~ 381 (653)
T PTZ00009 302 ARFEELCGDYFRNTLQPVEKVLKDAGMDKRSVHEVVLVGGSTRIPKVQSLIKDFFNGKEPCKSINPDEAVAYGAAVQAAI 381 (653)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHCcEEEEECCCCCChhHHHHHHHHhCCCCCCCCCCcchHHhhhhhhhHHH
Confidence 99999999999999999999999999999999999999999999999999999997778888999999999999999999
Q ss_pred HhCCCCcceeeeEEeeeccccceEEecCceEEEEEecCCCCCCceEEEEEeccCCCCcEEEEEeecCccccccCceeeEE
Q psy6736 365 LHGDKSEEVQDLLLLDVTPLSLGIETAGGVMTALIKRNTTIPTKQTQTFTTYSDNQPGVLIQVYEGERAMTKDNNLLGKF 444 (1023)
Q Consensus 365 l~~~~~~~~~~~~~~d~~~~sigi~~~~~~~~~ii~~~t~ip~~~~~~~~~~~d~q~~~~i~i~~g~~~~~~~~~~lg~~ 444 (1023)
+++...++++++.+.|++|++||++..++.+.+||++|+++|++++++|++..++|+.+.|.||||++....+|..||+|
T Consensus 382 ls~~~~~~~~~~~~~dv~p~slgi~~~~~~~~~ii~~~t~iP~~~~~~f~t~~d~q~~~~i~i~ege~~~~~~n~~lg~~ 461 (653)
T PTZ00009 382 LTGEQSSQVQDLLLLDVTPLSLGLETAGGVMTKLIERNTTIPTKKSQIFTTYADNQPGVLIQVFEGERAMTKDNNLLGKF 461 (653)
T ss_pred hcCCccccccceEEEeecccccCccccCCceEEEEeCCCcCCccceeEeEeecCCCceEEEEEEecccccCCCCceEEEE
Confidence 99755577889999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EecCCCCCCCCCCeEEEEEEEcCCcceEEEEEeccCCcceeEEEecCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy6736 445 ELTSIPPAPRGVPQIEVTFDIDANGILNVTAIEKSTGKENKITITNDRGRLSKEDIERMVNDAEKYKAEDEKQKAVISAK 524 (1023)
Q Consensus 445 ~i~~~~~~~~g~~~i~v~f~~d~~g~l~v~~~~~~t~~~~~~~i~~~~~~ls~~~~~~~~~~~~~~~~~d~~~~~~~~a~ 524 (1023)
.+.++|+.+.|.+.|+|+|++|.||+|+|++.+..+++...+++.....+|+.++++++++.+.++..+|+..+++.+++
T Consensus 462 ~i~~i~~~~~g~~~i~v~f~id~~Gil~v~~~~~~t~~~~~~~i~~~~~~ls~~~i~~~~~~~~~~~~~d~~~~~~~eak 541 (653)
T PTZ00009 462 HLDGIPPAPRGVPQIEVTFDIDANGILNVSAEDKSTGKSNKITITNDKGRLSKADIDRMVNEAEKYKAEDEANRERVEAK 541 (653)
T ss_pred EEcCCCCCCCCCceEEEEEEECCCCeEEEEEecccCCceeeEEEeeccccccHHHHHHHHHHHHHHHHHhHHHHHHHHHH
Confidence 99999999999889999999999999999999999999999988876678999999999999999999999999999999
Q ss_pred HhHHHHHHHHHhhhhhhhhhccCCHHHHHHHHHhhHHHHHHHhhCCccCHHHHHHHHHHHHHHHHHHHHHHHcccC-CCC
Q psy6736 525 NSLESYCFNMKSTVEDEKLKDKISDAERTQILDKCNDVIKWLDANQLAEKEEFEHKQKELEAICNPIITKLYQGSG-GAP 603 (1023)
Q Consensus 525 N~lE~~iy~~~~~l~~~~~~~~~~~~e~~~l~~~l~~~~~WL~~~~~a~~~~~~~kl~~L~~~~~pi~~r~~e~~g-~~~ 603 (1023)
|+||+|||++|+.|+++++..++++++++++.+.++++++||+++.+++.++|++|+++|+++++|+..|++..+| |+|
T Consensus 542 N~lEs~Iy~~r~~L~~~~~~~~~t~ee~~~l~~~l~~~~~wL~~~~~~~~~~~~~kl~eL~~~~~pi~~r~~~~~~~~~~ 621 (653)
T PTZ00009 542 NGLENYCYSMKNTLQDEKVKGKLSDSDKATIEKAIDEALEWLEKNQLAEKEEFEHKQKEVESVCNPIMTKMYQAAGGGMP 621 (653)
T ss_pred hhhHHHHHHHHHHHhhhhhhccCCHHHHHHHHHHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHHHHHHHHHhhccCCCC
Confidence 9999999999999986668999999999999999999999999888899999999999999999999999987766 455
Q ss_pred CCCCCCCC-CCCCCCCC--CCCCCCCCccCC
Q psy6736 604 GGFPGAPG-AGAPPSGA--PGAGPGPTIEEG 631 (1023)
Q Consensus 604 ~~~p~~~~-~~~~~~~~--~~~~~~~~~~~~ 631 (1023)
++-|+-|+ --+.++++ +|+++||.+++.
T Consensus 622 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 652 (653)
T PTZ00009 622 GGMPGGMPGGMPGGAGPAGAGASSGPTVEEV 652 (653)
T ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCccccC
Confidence 54444332 11122223 356789988875
No 3
>PRK13411 molecular chaperone DnaK; Provisional
Probab=100.00 E-value=4.8e-86 Score=796.32 Aligned_cols=557 Identities=46% Similarity=0.682 Sum_probs=506.0
Q ss_pred CcccCCCCCeeEEeecccccccceeecccccccCCccccceeeEEEeccCeEEee--------cCCCceeeeeecccCCc
Q psy6736 1 MAIIHPDHPEVEITEEQSLLIQTSIMDLIGDNLGQGLIKPAFSGIRLEEGAVMLY--------CSDGYTAGWINSITGDL 72 (1023)
Q Consensus 1 vav~~~~~p~~~~~~~~~~~~~pS~~~~~~~~~g~~~~~ps~v~~~~~~~~~~~G--------~~~~~~~~~~k~~~g~~ 72 (1023)
||+|.++.|.+ |.|.+|++.+||++.+.. ++..++| ..|..++..||+++|..
T Consensus 16 va~~~~g~~~i-i~n~~g~r~tPS~V~f~~------------------~~~~~vG~~A~~~~~~~p~~ti~~~KrliG~~ 76 (653)
T PRK13411 16 VAVLEGGKPIV-IPNSEGGRTTPSIVGFGK------------------SGDRLVGQLAKRQAVTNAENTVYSIKRFIGRR 76 (653)
T ss_pred EEEEECCEEEE-EECCCCCccCceEEEEeC------------------CCCEEEcHHHHHhhhhCcccchHHHHHHhCCC
Confidence 57788888887 888888777777776642 2223334 35666777788888863
Q ss_pred C---------------------ccccccccccCHHHHHhHhhhhccCcchHHHHHHHHHhCCcCCcceEecCCCCCHHHH
Q psy6736 73 T---------------------PWDGARLKAVSAQELSRGVKAIFTAPDILKKKTSEDILRKVDGQNEGLIPAYFNISSV 131 (1023)
Q Consensus 73 ~---------------------~~~~~~~~~~~~~~v~a~~L~~~~~~~~~l~~~a~~~~~~~~~~~vitVPa~~~~~qr 131 (1023)
. +.+...+..++|++++|++| ++|++.|+.++|.++.++|||||+||++.||
T Consensus 77 ~~d~~~~~~~~~~~~v~~~~~~~~~~i~~~~~~peei~a~iL-------~~lk~~ae~~lg~~v~~~VITVPa~f~~~qR 149 (653)
T PRK13411 77 WDDTEEERSRVPYTCVKGRDDTVNVQIRGRNYTPQEISAMIL-------QKLKQDAEAYLGEPVTQAVITVPAYFTDAQR 149 (653)
T ss_pred ccchhHHhhcCCceEEecCCCceEEEECCEEECHHHHHHHHH-------HHHHHHHHHHhCCCcceEEEEECCCCCcHHH
Confidence 1 11122345789999999999 9999999999999999999999999999999
Q ss_pred HHHHHHHHHcCCceeeeecchHHHHHHhccccccCccccccCCCCCcEEEEEEeCCceEEEEEEEEeCCEEEEEEecCCC
Q psy6736 132 KSTKDSGTIAGLNVLRIINEPTAAAIAYGLDKKVGSTAVEYNGSGERNVLIFDLGGGTFDVSILTIEDGIFEVKSTAGDT 211 (1023)
Q Consensus 132 ~~l~~Aa~~AGl~~~~li~Ep~AAal~y~~~~~~~~~~~~~~~~~~~~vlV~D~GggT~dvsv~~~~~~~~~v~~~~~~~ 211 (1023)
+++++||++|||++++|++||+|||++|+..... .+.++|||||||||||+|++++.++.++++++.|+.
T Consensus 150 ~a~~~Aa~~AGl~v~~li~EPtAAAl~y~~~~~~----------~~~~vlV~DlGgGT~dvsi~~~~~~~~~V~at~gd~ 219 (653)
T PRK13411 150 QATKDAGTIAGLEVLRIINEPTAAALAYGLDKQD----------QEQLILVFDLGGGTFDVSILQLGDGVFEVKATAGNN 219 (653)
T ss_pred HHHHHHHHHcCCCeEEEecchHHHHHHhcccccC----------CCCEEEEEEcCCCeEEEEEEEEeCCEEEEEEEecCC
Confidence 9999999999999999999999999999886431 467899999999999999999999999999999999
Q ss_pred CccHHHHHHHHHHHHHHHHHhhhccCccccHHHHHHHHHHHHHHhHHcCCCCceEEEEecccC----CceeEEEecHHHH
Q psy6736 212 HLGGEDFDNRMVNHFVQEFKRKYKKDLTTNKRALRRLRTACERAKRTLSSSTQASIEIDSLFE----GVDFYTSITRARF 287 (1023)
Q Consensus 212 ~lGG~~~D~~l~~~l~~~~~~~~~~~~~~~~~~~~~L~~~ae~~K~~Ls~~~~~~i~i~~~~~----~~~~~~~itr~~~ 287 (1023)
++||.+||.+|++|+.++|..+++.++..+++++.+|+.+||++|+.||.+..+.+.++++.. +.++.+.|||++|
T Consensus 220 ~LGG~dfD~~l~~~l~~~f~~~~~~d~~~~~~~~~rL~~~aE~aK~~LS~~~~~~i~i~~~~~d~~~~~~~~~~itR~~f 299 (653)
T PRK13411 220 HLGGDDFDNCIVDWLVENFQQQEGIDLSQDKMALQRLREAAEKAKIELSSMLTTSINLPFITADETGPKHLEMELTRAKF 299 (653)
T ss_pred CcCHHHHHHHHHHHHHHHHHHhhCCCcccCHHHHHHHHHHHHHHHHhcCCCCceEEEEeeeccCCCCCeeEEEEEcHHHH
Confidence 999999999999999999998888888889999999999999999999999999998887643 3578899999999
Q ss_pred HHHhHHHHHHHHHHHHHHHHHcCCCccCcCeEEEEcCCCCcHHHHHHHHHHcCCccccccCCCchhHHhHHHHHHHHHhC
Q psy6736 288 EELNADLFRGTMEPVEKSLRDAKMDKAQIHDIVLVGGSTRIPKVQKLLQDFFNGKELNKSINPDEAVAYGAAVQAAILHG 367 (1023)
Q Consensus 288 e~~~~~~~~~i~~~i~~~l~~~~~~~~~i~~V~LvGG~sr~p~v~~~l~~~f~~~~i~~~~~pd~aVa~GAa~~a~~l~~ 367 (1023)
+++++|+++++..+|+++|+++++.+.+|+.|+||||+||+|+|++.|+++|++..+..++|||+|||+|||++|+.+++
T Consensus 300 e~l~~~l~~~~~~~i~~~L~~a~~~~~~id~ViLvGGssriP~v~~~l~~~f~~~~~~~~~npdeaVA~GAAi~aa~l~~ 379 (653)
T PRK13411 300 EELTKDLVEATIEPMQQALKDAGLKPEDIDRVILVGGSTRIPAVQEAIQKFFGGKQPDRSVNPDEAVALGAAIQAGVLGG 379 (653)
T ss_pred HHHHHHHHHHHHHHHHHHHHHcCCCHHHCcEEEEECCCCCcchHHHHHHHHcCCcCcCCCCCchHHHHHHHHHHHHhhcC
Confidence 99999999999999999999999999999999999999999999999999997778888999999999999999999986
Q ss_pred CCCcceeeeEEeeeccccceEEecCceEEEEEecCCCCCCceEEEEEeccCCCCcEEEEEeecCccccccCceeeEEEec
Q psy6736 368 DKSEEVQDLLLLDVTPLSLGIETAGGVMTALIKRNTTIPTKQTQTFTTYSDNQPGVLIQVYEGERAMTKDNNLLGKFELT 447 (1023)
Q Consensus 368 ~~~~~~~~~~~~d~~~~sigi~~~~~~~~~ii~~~t~ip~~~~~~~~~~~d~q~~~~i~i~~g~~~~~~~~~~lg~~~i~ 447 (1023)
.++++.+.|++|++||+++.++.|.+|||||+++|++++++|++..++|+.+.|.+|||++..+.+|..+|+|.+.
T Consensus 380 ----~~~~~~~~dv~p~slgi~~~~~~~~~ii~r~t~iP~~~~~~f~t~~d~q~~v~i~v~~ge~~~~~~n~~lg~~~l~ 455 (653)
T PRK13411 380 ----EVKDLLLLDVTPLSLGIETLGEVFTKIIERNTTIPTSKSQVFSTATDGQTSVEIHVLQGERAMAKDNKSLGKFLLT 455 (653)
T ss_pred ----CccceeeeecccceeeEEecCCceEEEEECCCcccceeeEEEEeccCCCeEEEEEEEEecCcccccCceeeEEEEc
Confidence 2678999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCCCCCeEEEEEEEcCCcceEEEEEeccCCcceeEEEecCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhH
Q psy6736 448 SIPPAPRGVPQIEVTFDIDANGILNVTAIEKSTGKENKITITNDRGRLSKEDIERMVNDAEKYKAEDEKQKAVISAKNSL 527 (1023)
Q Consensus 448 ~~~~~~~g~~~i~v~f~~d~~g~l~v~~~~~~t~~~~~~~i~~~~~~ls~~~~~~~~~~~~~~~~~d~~~~~~~~a~N~l 527 (1023)
++|+++.|.+.|+|+|++|.||+|+|++.+..+|++..+.+.+. .+|+.+++++++++++++..+|+..+++.++||+|
T Consensus 456 ~i~~~~~g~~~i~v~f~id~~Gil~v~a~d~~t~~~~~~~i~~~-~~ls~~ei~~~~~~~~~~~~~D~~~~~~~eakN~l 534 (653)
T PRK13411 456 GIPPAPRGVPQIEVSFEIDVNGILKVSAQDQGTGREQSIRITNT-GGLSSNEIERMRQEAEKYAEEDRRRKQLIELKNQA 534 (653)
T ss_pred CCCCCCCCCccEEEEEEECCCCeEEEEEeeccCCceEeeEEecc-ccchHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999888888764 57999999999999999999999999999999999
Q ss_pred HHHHHHHHhhhhhhhhhccCCHHHHHHHHHhhHHHHHHHhhCCccCHHHHHHHHHHHHHHHHHHHHHHHcccCC
Q psy6736 528 ESYCFNMKSTVEDEKLKDKISDAERTQILDKCNDVIKWLDANQLAEKEEFEHKQKELEAICNPIITKLYQGSGG 601 (1023)
Q Consensus 528 E~~iy~~~~~l~~~~~~~~~~~~e~~~l~~~l~~~~~WL~~~~~a~~~~~~~kl~~L~~~~~pi~~r~~e~~g~ 601 (1023)
|+|+|.+|+.|++ +..++++++++++.+.++++++||+++ +++.++|++++++|++.+.++..++++++|+
T Consensus 535 Es~iy~~r~~l~~--~~~~~~~~er~~i~~~l~~~~~wL~~~-~~~~~~~~~~~~el~~~~~~i~~~~y~~~~~ 605 (653)
T PRK13411 535 DSLLYSYESTLKE--NGELISEELKQRAEQKVEQLEAALTDP-NISLEELKQQLEEFQQALLAIGAEVYQQGGS 605 (653)
T ss_pred HHHHHHHHHHHHH--hhccCCHHHHHHHHHHHHHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHHHHHhhcCC
Confidence 9999999999974 578999999999999999999999984 4688999999999999999999999877664
No 4
>PRK13410 molecular chaperone DnaK; Provisional
Probab=100.00 E-value=7e-86 Score=791.52 Aligned_cols=554 Identities=39% Similarity=0.624 Sum_probs=504.1
Q ss_pred CcccCCCCCeeEEeecccccccceeecccccccCCccccceeeEEEeccCeEEee--------cCCCceeeeeecccCCc
Q psy6736 1 MAIIHPDHPEVEITEEQSLLIQTSIMDLIGDNLGQGLIKPAFSGIRLEEGAVMLY--------CSDGYTAGWINSITGDL 72 (1023)
Q Consensus 1 vav~~~~~p~~~~~~~~~~~~~pS~~~~~~~~~g~~~~~ps~v~~~~~~~~~~~G--------~~~~~~~~~~k~~~g~~ 72 (1023)
||++.++.|.+ |.|.+|.+.|||++.+.. ++.+++| ..|..++..||+++|..
T Consensus 16 va~~~~g~~~i-i~n~~g~r~tPS~V~f~~------------------~~~~~vG~~A~~~~~~~p~~ti~~~KRliG~~ 76 (668)
T PRK13410 16 VAVMEGGKPVV-IANAEGMRTTPSVVGFTK------------------DGELLVGQLARRQLVLNPQNTFYNLKRFIGRR 76 (668)
T ss_pred EEEEECCeEEE-EECCCCCccCceEEEEeC------------------CCCEEECHHHHHhhHhCccceehHHhhhhCCC
Confidence 57788888887 788888777777776642 2233344 45677778888888874
Q ss_pred Cc-----------------------cccccccccCHHHHHhHhhhhccCcchHHHHHHHHHhCCcCCcceEecCCCCCHH
Q psy6736 73 TP-----------------------WDGARLKAVSAQELSRGVKAIFTAPDILKKKTSEDILRKVDGQNEGLIPAYFNIS 129 (1023)
Q Consensus 73 ~~-----------------------~~~~~~~~~~~~~v~a~~L~~~~~~~~~l~~~a~~~~~~~~~~~vitVPa~~~~~ 129 (1023)
.. .....+..++|++|+|++| ++|++.|+.++|.++.++|||||+||++.
T Consensus 77 ~~~~~~~~~~~~~~v~~~~~g~~~i~~~~~~~~~speel~a~iL-------~~lk~~ae~~lg~~v~~~VITVPa~f~~~ 149 (668)
T PRK13410 77 YDELDPESKRVPYTIRRNEQGNVRIKCPRLEREFAPEELSAMIL-------RKLADDASRYLGEPVTGAVITVPAYFNDS 149 (668)
T ss_pred chhhHHhhccCCeEEEECCCCcEEEEEecCCeEEcHHHHHHHHH-------HHHHHHHHHHhCCCcceEEEEECCCCCHH
Confidence 20 0111235799999999999 99999999999999999999999999999
Q ss_pred HHHHHHHHHHHcCCceeeeecchHHHHHHhccccccCccccccCCCCCcEEEEEEeCCceEEEEEEEEeCCEEEEEEecC
Q psy6736 130 SVKSTKDSGTIAGLNVLRIINEPTAAAIAYGLDKKVGSTAVEYNGSGERNVLIFDLGGGTFDVSILTIEDGIFEVKSTAG 209 (1023)
Q Consensus 130 qr~~l~~Aa~~AGl~~~~li~Ep~AAal~y~~~~~~~~~~~~~~~~~~~~vlV~D~GggT~dvsv~~~~~~~~~v~~~~~ 209 (1023)
||++|++||++|||++++||+||+|||++|+.... .+.++||||+||||||+|++++.++.++++++.|
T Consensus 150 qR~a~~~Aa~~AGl~v~~li~EPtAAAlayg~~~~-----------~~~~vlV~DlGgGT~Dvsv~~~~~g~~~V~at~g 218 (668)
T PRK13410 150 QRQATRDAGRIAGLEVERILNEPTAAALAYGLDRS-----------SSQTVLVFDLGGGTFDVSLLEVGNGVFEVKATSG 218 (668)
T ss_pred HHHHHHHHHHHcCCCeEEEecchHHHHHHhccccC-----------CCCEEEEEECCCCeEEEEEEEEcCCeEEEEEeec
Confidence 99999999999999999999999999999987653 5678999999999999999999999999999999
Q ss_pred CCCccHHHHHHHHHHHHHHHHHhhhccCccccHHHHHHHHHHHHHHhHHcCCCCceEEEEecccCC----ceeEEEecHH
Q psy6736 210 DTHLGGEDFDNRMVNHFVQEFKRKYKKDLTTNKRALRRLRTACERAKRTLSSSTQASIEIDSLFEG----VDFYTSITRA 285 (1023)
Q Consensus 210 ~~~lGG~~~D~~l~~~l~~~~~~~~~~~~~~~~~~~~~L~~~ae~~K~~Ls~~~~~~i~i~~~~~~----~~~~~~itr~ 285 (1023)
+.++||.+||.+|++|+.++|..+++.++..+++++.+|+.+||++|+.||.+..+.+.++.+..+ .++..+|||+
T Consensus 219 d~~lGG~dfD~~l~~~l~~~f~~~~~~d~~~~~~a~~rL~~~aEkaK~~LS~~~~~~i~i~~~~~~~~g~~~~~~~itR~ 298 (668)
T PRK13410 219 DTQLGGNDFDKRIVDWLAEQFLEKEGIDLRRDRQALQRLTEAAEKAKIELSGVSVTDISLPFITATEDGPKHIETRLDRK 298 (668)
T ss_pred CCCCChhHHHHHHHHHHHHHHHhhhCCCcccCHHHHHHHHHHHHHHHHhcCCCCceEEEEeeeecCCCCCeeEEEEECHH
Confidence 999999999999999999999988888888899999999999999999999999999998876543 4688999999
Q ss_pred HHHHHhHHHHHHHHHHHHHHHHHcCCCccCcCeEEEEcCCCCcHHHHHHHHHHcCCccccccCCCchhHHhHHHHHHHHH
Q psy6736 286 RFEELNADLFRGTMEPVEKSLRDAKMDKAQIHDIVLVGGSTRIPKVQKLLQDFFNGKELNKSINPDEAVAYGAAVQAAIL 365 (1023)
Q Consensus 286 ~~e~~~~~~~~~i~~~i~~~l~~~~~~~~~i~~V~LvGG~sr~p~v~~~l~~~f~~~~i~~~~~pd~aVa~GAa~~a~~l 365 (1023)
+|+++|+++++++..+|+++|+++++.+.+|+.|+||||+||||+|++.|+++| +.++...+||++|||+|||++|+++
T Consensus 299 ~FE~l~~~l~~r~~~~i~~~L~~ag~~~~dId~VvLVGGssRiP~V~~~l~~~f-g~~~~~~~npdeaVA~GAAi~aa~l 377 (668)
T PRK13410 299 QFESLCGDLLDRLLRPVKRALKDAGLSPEDIDEVVLVGGSTRMPMVQQLVRTLI-PREPNQNVNPDEVVAVGAAIQAGIL 377 (668)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHcCCChhhCcEEEEECCccccHHHHHHHHHHc-CCCcccCCCCchHHHHhHHHHHHhh
Confidence 999999999999999999999999999999999999999999999999999999 5677889999999999999999999
Q ss_pred hCCCCcceeeeEEeeeccccceEEecCceEEEEEecCCCCCCceEEEEEeccCCCCcEEEEEeecCccccccCceeeEEE
Q psy6736 366 HGDKSEEVQDLLLLDVTPLSLGIETAGGVMTALIKRNTTIPTKQTQTFTTYSDNQPGVLIQVYEGERAMTKDNNLLGKFE 445 (1023)
Q Consensus 366 ~~~~~~~~~~~~~~d~~~~sigi~~~~~~~~~ii~~~t~ip~~~~~~~~~~~d~q~~~~i~i~~g~~~~~~~~~~lg~~~ 445 (1023)
++ .++++.+.|++|++||+++.+|.+.+|||+|+++|++++.+|++..++|+.+.|+||||++....+|..||+|.
T Consensus 378 s~----~~~~~~l~Dv~p~slgie~~~g~~~~li~rnt~iP~~~~~~f~t~~dnq~~v~i~v~qGe~~~~~~n~~lg~~~ 453 (668)
T PRK13410 378 AG----ELKDLLLLDVTPLSLGLETIGGVMKKLIPRNTTIPVRRSDVFSTSENNQSSVEIHVWQGEREMASDNKSLGRFK 453 (668)
T ss_pred cc----cccceeEEeeccccccceecCCeeEEEEeCCCcccccccccceeccCCCcEEEEEEEeeccccccCCceEEEEE
Confidence 87 35789999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ecCCCCCCCCCCeEEEEEEEcCCcceEEEEEeccCCcceeEEEecCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy6736 446 LTSIPPAPRGVPQIEVTFDIDANGILNVTAIEKSTGKENKITITNDRGRLSKEDIERMVNDAEKYKAEDEKQKAVISAKN 525 (1023)
Q Consensus 446 i~~~~~~~~g~~~i~v~f~~d~~g~l~v~~~~~~t~~~~~~~i~~~~~~ls~~~~~~~~~~~~~~~~~d~~~~~~~~a~N 525 (1023)
|.++|+++.|.++|+|+|++|.||+|+|++.+..||++..+++... .+|+.++++++++++.++..+|+..+++.++||
T Consensus 454 l~~i~~~~~g~~~I~v~f~id~nGiL~V~a~d~~tg~~~~~~i~~~-~~ls~~ei~~~~~~~~~~~~~d~~~~~~~e~kn 532 (668)
T PRK13410 454 LSGIPPAPRGVPQVQVAFDIDANGILQVSATDRTTGREQSVTIQGA-STLSEQEVNRMIQEAEAKADEDRRRRERIEKRN 532 (668)
T ss_pred EeCCCCCCCCCCeEEEEEEECCCcEEEEEEEEcCCCceeeeeeccc-ccCCHHHHHHHHHHHHHHhhhhHHHHHHHHHHH
Confidence 9999999999999999999999999999999999999988888754 679999999999999999999999999999999
Q ss_pred hHHHHHHHHHhhhhh--hhhhccCCHHHHHHHHHhhHHHHHHHhhCC-ccCHHHHHHHHHHHHHHHHHHHHHHHc
Q psy6736 526 SLESYCFNMKSTVED--EKLKDKISDAERTQILDKCNDVIKWLDANQ-LAEKEEFEHKQKELEAICNPIITKLYQ 597 (1023)
Q Consensus 526 ~lE~~iy~~~~~l~~--~~~~~~~~~~e~~~l~~~l~~~~~WL~~~~-~a~~~~~~~kl~~L~~~~~pi~~r~~e 597 (1023)
++|+|+|.+|+.|.+ +.+..++++++++++.+.++++++||++++ +...+.+.++++.|+.+..++..|+.+
T Consensus 533 ~~e~~i~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~wL~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~ 607 (668)
T PRK13410 533 RALTLIAQAERRLRDAALEFGPYFAERQRRAVESAMRDVQDSLEQDDDRELDLAVADLQEALYGLNREVRAEYKE 607 (668)
T ss_pred HHHHHHHHHHHHHHhhhhhhhccCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHhh
Confidence 999999999999975 358899999999999999999999999775 466777888889999999999999988
No 5
>PLN03184 chloroplast Hsp70; Provisional
Probab=100.00 E-value=9.9e-85 Score=784.88 Aligned_cols=554 Identities=44% Similarity=0.674 Sum_probs=501.4
Q ss_pred CcccCCCCCeeEEeecccccccceeecccccccCCccccceeeEEEeccCeEEee--------cCCCceeeeeecccCCc
Q psy6736 1 MAIIHPDHPEVEITEEQSLLIQTSIMDLIGDNLGQGLIKPAFSGIRLEEGAVMLY--------CSDGYTAGWINSITGDL 72 (1023)
Q Consensus 1 vav~~~~~p~~~~~~~~~~~~~pS~~~~~~~~~g~~~~~ps~v~~~~~~~~~~~G--------~~~~~~~~~~k~~~g~~ 72 (1023)
||+|.++.|.+ +.|++|++.|||++.+. .++.+++| ..|..++..+|+++|..
T Consensus 53 va~~~~g~~~i-i~n~~g~r~tPS~V~f~------------------~~~~~~vG~~A~~~~~~~p~~ti~~~KrliG~~ 113 (673)
T PLN03184 53 VAAMEGGKPTI-VTNAEGQRTTPSVVAYT------------------KNGDRLVGQIAKRQAVVNPENTFFSVKRFIGRK 113 (673)
T ss_pred EEEEECCeEEE-EECCCCCeecceEEEEc------------------CCCCEEECHHHHHhhhhCchhhhHHHHHhhCCC
Confidence 46777777776 77777777777776664 22233444 45677777888888864
Q ss_pred Cc-----------------------cccccccccCHHHHHhHhhhhccCcchHHHHHHHHHhCCcCCcceEecCCCCCHH
Q psy6736 73 TP-----------------------WDGARLKAVSAQELSRGVKAIFTAPDILKKKTSEDILRKVDGQNEGLIPAYFNIS 129 (1023)
Q Consensus 73 ~~-----------------------~~~~~~~~~~~~~v~a~~L~~~~~~~~~l~~~a~~~~~~~~~~~vitVPa~~~~~ 129 (1023)
.. .....+..++|+++++++| ++|++.|+.+++.++.++|||||+||++.
T Consensus 114 ~~d~~~~~~~~~~~v~~~~~~~v~~~~~~~~~~~speei~a~iL-------~~lk~~ae~~lg~~v~~~VITVPa~f~~~ 186 (673)
T PLN03184 114 MSEVDEESKQVSYRVVRDENGNVKLDCPAIGKQFAAEEISAQVL-------RKLVDDASKFLNDKVTKAVITVPAYFNDS 186 (673)
T ss_pred cchhhhhhhcCCeEEEecCCCcEEEEEecCCeEEcHHHHHHHHH-------HHHHHHHHHHhCCCCCeEEEEECCCCCHH
Confidence 20 0112345799999999999 99999999999999999999999999999
Q ss_pred HHHHHHHHHHHcCCceeeeecchHHHHHHhccccccCccccccCCCCCcEEEEEEeCCceEEEEEEEEeCCEEEEEEecC
Q psy6736 130 SVKSTKDSGTIAGLNVLRIINEPTAAAIAYGLDKKVGSTAVEYNGSGERNVLIFDLGGGTFDVSILTIEDGIFEVKSTAG 209 (1023)
Q Consensus 130 qr~~l~~Aa~~AGl~~~~li~Ep~AAal~y~~~~~~~~~~~~~~~~~~~~vlV~D~GggT~dvsv~~~~~~~~~v~~~~~ 209 (1023)
||+++++||++|||++++||+||+|||++|+.... .+.++|||||||||||+|++++.++.++++++.|
T Consensus 187 qR~a~~~Aa~~AGl~v~~li~EPtAAAlayg~~~~-----------~~~~vlV~DlGgGT~DvSi~~~~~~~~eVla~~g 255 (673)
T PLN03184 187 QRTATKDAGRIAGLEVLRIINEPTAASLAYGFEKK-----------SNETILVFDLGGGTFDVSVLEVGDGVFEVLSTSG 255 (673)
T ss_pred HHHHHHHHHHHCCCCeEEEeCcHHHHHHHhhcccC-----------CCCEEEEEECCCCeEEEEEEEecCCEEEEEEecC
Confidence 99999999999999999999999999999987653 4678999999999999999999999999999999
Q ss_pred CCCccHHHHHHHHHHHHHHHHHhhhccCccccHHHHHHHHHHHHHHhHHcCCCCceEEEEecccC----CceeEEEecHH
Q psy6736 210 DTHLGGEDFDNRMVNHFVQEFKRKYKKDLTTNKRALRRLRTACERAKRTLSSSTQASIEIDSLFE----GVDFYTSITRA 285 (1023)
Q Consensus 210 ~~~lGG~~~D~~l~~~l~~~~~~~~~~~~~~~~~~~~~L~~~ae~~K~~Ls~~~~~~i~i~~~~~----~~~~~~~itr~ 285 (1023)
+.++||++||++|++|+.++|..+++.++..+++++.+|+.+||++|+.||.+.++.+.++++.. +.++.++|||+
T Consensus 256 d~~LGG~dfD~~L~~~~~~~f~~~~~~d~~~~~~~~~rL~~~aEkaK~~LS~~~~~~i~i~~~~~~~~g~~~~~~~itR~ 335 (673)
T PLN03184 256 DTHLGGDDFDKRIVDWLASNFKKDEGIDLLKDKQALQRLTEAAEKAKIELSSLTQTSISLPFITATADGPKHIDTTLTRA 335 (673)
T ss_pred CCccCHHHHHHHHHHHHHHHHHhhcCCCcccCHHHHHHHHHHHHHHHHhcCCCCcceEEEEeeeccCCCCceEEEEECHH
Confidence 99999999999999999999999888888889999999999999999999999999998876542 35788999999
Q ss_pred HHHHHhHHHHHHHHHHHHHHHHHcCCCccCcCeEEEEcCCCCcHHHHHHHHHHcCCccccccCCCchhHHhHHHHHHHHH
Q psy6736 286 RFEELNADLFRGTMEPVEKSLRDAKMDKAQIHDIVLVGGSTRIPKVQKLLQDFFNGKELNKSINPDEAVAYGAAVQAAIL 365 (1023)
Q Consensus 286 ~~e~~~~~~~~~i~~~i~~~l~~~~~~~~~i~~V~LvGG~sr~p~v~~~l~~~f~~~~i~~~~~pd~aVa~GAa~~a~~l 365 (1023)
+|+++++++++++..+|+++|+++++.+.+|+.|+||||+||+|+|++.|+++| +..+...+|||+|||+|||++|+++
T Consensus 336 ~fe~l~~~l~~r~~~~i~~~L~~a~~~~~dId~ViLvGGssriP~V~~~i~~~f-g~~~~~~~npdeaVA~GAAi~aa~l 414 (673)
T PLN03184 336 KFEELCSDLLDRCKTPVENALRDAKLSFKDIDEVILVGGSTRIPAVQELVKKLT-GKDPNVTVNPDEVVALGAAVQAGVL 414 (673)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHcCCChhHccEEEEECCccccHHHHHHHHHHh-CCCcccccCcchHHHHHHHHHHHHh
Confidence 999999999999999999999999999999999999999999999999999999 5677788999999999999999999
Q ss_pred hCCCCcceeeeEEeeeccccceEEecCceEEEEEecCCCCCCceEEEEEeccCCCCcEEEEEeecCccccccCceeeEEE
Q psy6736 366 HGDKSEEVQDLLLLDVTPLSLGIETAGGVMTALIKRNTTIPTKQTQTFTTYSDNQPGVLIQVYEGERAMTKDNNLLGKFE 445 (1023)
Q Consensus 366 ~~~~~~~~~~~~~~d~~~~sigi~~~~~~~~~ii~~~t~ip~~~~~~~~~~~d~q~~~~i~i~~g~~~~~~~~~~lg~~~ 445 (1023)
++ .++++.+.|++|++||+++.++.+.+|||+|+++|++++++|++..|+|+.+.|.+|||++....+|..||+|.
T Consensus 415 s~----~~~~~~~~dv~p~slgi~~~~~~~~~ii~r~t~iP~~~~~~f~t~~d~q~~v~i~i~~ge~~~~~~n~~lg~~~ 490 (673)
T PLN03184 415 AG----EVSDIVLLDVTPLSLGLETLGGVMTKIIPRNTTLPTSKSEVFSTAADGQTSVEINVLQGEREFVRDNKSLGSFR 490 (673)
T ss_pred cc----CccceEEEecccccceEEecCCeeEEEEeCCCccceecceEeeeecCCCcEEEEEEEeecccccccCceEEEEE
Confidence 86 35688999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ecCCCCCCCCCCeEEEEEEEcCCcceEEEEEeccCCcceeEEEecCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy6736 446 LTSIPPAPRGVPQIEVTFDIDANGILNVTAIEKSTGKENKITITNDRGRLSKEDIERMVNDAEKYKAEDEKQKAVISAKN 525 (1023)
Q Consensus 446 i~~~~~~~~g~~~i~v~f~~d~~g~l~v~~~~~~t~~~~~~~i~~~~~~ls~~~~~~~~~~~~~~~~~d~~~~~~~~a~N 525 (1023)
|.++|+++.|.+.|+|+|.+|.||+|+|++.+..++++..+++... .+|+.++++++++++.++..+|+..+++.++||
T Consensus 491 i~~i~~~~~g~~~i~v~f~id~~GiL~V~a~~~~t~~~~~~~i~~~-~~ls~eei~~~~~~~~~~~~~D~~~~~~~eakN 569 (673)
T PLN03184 491 LDGIPPAPRGVPQIEVKFDIDANGILSVSATDKGTGKKQDITITGA-STLPKDEVERMVQEAEKFAKEDKEKRDAVDTKN 569 (673)
T ss_pred EeCCCCCCCCCceEEEEEEeCCCCeEEEEEEecCCCeEEEEEeccc-ccccHHHHHHHHHHHHHhhhhhHHHHHHHHHHH
Confidence 9999999999999999999999999999999999999998888754 579999999999999999999999999999999
Q ss_pred hHHHHHHHHHhhhhhhhhhccCCHHHHHHHHHhhHHHHHHHhhCCccCHHHHHHHHHHHHHHHHHHHHHHHcccCCC
Q psy6736 526 SLESYCFNMKSTVEDEKLKDKISDAERTQILDKCNDVIKWLDANQLAEKEEFEHKQKELEAICNPIITKLYQGSGGA 602 (1023)
Q Consensus 526 ~lE~~iy~~~~~l~~~~~~~~~~~~e~~~l~~~l~~~~~WL~~~~~a~~~~~~~kl~~L~~~~~pi~~r~~e~~g~~ 602 (1023)
+||+|+|.+|+.|.+ +.+++++++++++.+.++++++||+.+ +.+.+++++++|.+.+.++..+++..+|+.
T Consensus 570 ~lE~~iy~~r~~l~e--~~~~~~~eer~~l~~~l~~~e~wL~~~---d~~~ik~~~~~l~~~l~~l~~~~~~~~~~~ 641 (673)
T PLN03184 570 QADSVVYQTEKQLKE--LGDKVPADVKEKVEAKLKELKDAIASG---STQKMKDAMAALNQEVMQIGQSLYNQPGAG 641 (673)
T ss_pred hHHHHHHHHHHHHHH--HhhhCCHHHHHHHHHHHHHHHHHHhcC---CHHHHHHHHHHHHHHHHHHHHHHHhcCCCC
Confidence 999999999999963 788999999999999999999999976 567889999999999999999988777643
No 6
>PTZ00400 DnaK-type molecular chaperone; Provisional
Probab=100.00 E-value=6.2e-85 Score=786.73 Aligned_cols=552 Identities=47% Similarity=0.745 Sum_probs=501.6
Q ss_pred CcccCCCCCeeEEeecccccccceeecccccccCCccccceeeEEEeccCeEEee--------cCCCceeeeeecccCCc
Q psy6736 1 MAIIHPDHPEVEITEEQSLLIQTSIMDLIGDNLGQGLIKPAFSGIRLEEGAVMLY--------CSDGYTAGWINSITGDL 72 (1023)
Q Consensus 1 vav~~~~~p~~~~~~~~~~~~~pS~~~~~~~~~g~~~~~ps~v~~~~~~~~~~~G--------~~~~~~~~~~k~~~g~~ 72 (1023)
||+|.++.|.+ |.|++|.+.+||++.+.. ++..++| ..|..++..+|+++|..
T Consensus 55 va~~~~~~~~i-i~n~~g~r~tPS~V~f~~------------------~~~~~vG~~A~~~~~~~p~~ti~~~KrliG~~ 115 (663)
T PTZ00400 55 VAIMEGSQPKV-IENSEGMRTTPSVVAFTE------------------DGQRLVGIVAKRQAVTNPENTVFATKRLIGRR 115 (663)
T ss_pred EEEEeCCeeEE-EECCCCCcccCeEEEEeC------------------CCCEEECHHHHHhHHhCCcceehhhhhhcCCC
Confidence 57777888777 778777777777776642 2233334 45677777788888863
Q ss_pred C-----------------------ccccccccccCHHHHHhHhhhhccCcchHHHHHHHHHhCCcCCcceEecCCCCCHH
Q psy6736 73 T-----------------------PWDGARLKAVSAQELSRGVKAIFTAPDILKKKTSEDILRKVDGQNEGLIPAYFNIS 129 (1023)
Q Consensus 73 ~-----------------------~~~~~~~~~~~~~~v~a~~L~~~~~~~~~l~~~a~~~~~~~~~~~vitVPa~~~~~ 129 (1023)
. +.+...+..++|++++|++| ++|++.|+.++|.++.++|||||+||++.
T Consensus 116 ~~d~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~speel~a~iL-------~~lk~~ae~~lg~~v~~~VITVPa~f~~~ 188 (663)
T PTZ00400 116 YDEDATKKEQKILPYKIVRASNGDAWIEAQGKKYSPSQIGAFVL-------EKMKETAESYLGRKVKQAVITVPAYFNDS 188 (663)
T ss_pred cCcHHHHhhhccCCeEEEecCCCceEEEECCEEECHHHHHHHHH-------HHHHHHHHHHhCCCCceEEEEECCCCCHH
Confidence 1 11112345799999999999 99999999999999999999999999999
Q ss_pred HHHHHHHHHHHcCCceeeeecchHHHHHHhccccccCccccccCCCCCcEEEEEEeCCceEEEEEEEEeCCEEEEEEecC
Q psy6736 130 SVKSTKDSGTIAGLNVLRIINEPTAAAIAYGLDKKVGSTAVEYNGSGERNVLIFDLGGGTFDVSILTIEDGIFEVKSTAG 209 (1023)
Q Consensus 130 qr~~l~~Aa~~AGl~~~~li~Ep~AAal~y~~~~~~~~~~~~~~~~~~~~vlV~D~GggT~dvsv~~~~~~~~~v~~~~~ 209 (1023)
||+++++||++||+++++||+||+|||++|+.... .+.++|||||||||||+|++++.++.++++++.|
T Consensus 189 qR~a~~~Aa~~AGl~v~~li~EptAAAlay~~~~~-----------~~~~vlV~DlGgGT~DvSv~~~~~g~~~v~a~~g 257 (663)
T PTZ00400 189 QRQATKDAGKIAGLDVLRIINEPTAAALAFGMDKN-----------DGKTIAVYDLGGGTFDISILEILGGVFEVKATNG 257 (663)
T ss_pred HHHHHHHHHHHcCCceEEEeCchHHHHHHhccccC-----------CCcEEEEEeCCCCeEEEEEEEecCCeeEEEeccc
Confidence 99999999999999999999999999999987653 5679999999999999999999999999999999
Q ss_pred CCCccHHHHHHHHHHHHHHHHHhhhccCccccHHHHHHHHHHHHHHhHHcCCCCceEEEEecccCC----ceeEEEecHH
Q psy6736 210 DTHLGGEDFDNRMVNHFVQEFKRKYKKDLTTNKRALRRLRTACERAKRTLSSSTQASIEIDSLFEG----VDFYTSITRA 285 (1023)
Q Consensus 210 ~~~lGG~~~D~~l~~~l~~~~~~~~~~~~~~~~~~~~~L~~~ae~~K~~Ls~~~~~~i~i~~~~~~----~~~~~~itr~ 285 (1023)
+.++||.+||.+|++|+.++|..+++.++..+++++.+|+.+||++|+.||.+.++.+.++.+..+ .++.++|||+
T Consensus 258 d~~LGG~d~D~~l~~~l~~~f~~~~~~~~~~~~~a~~~L~~~aE~aK~~LS~~~~~~i~i~~~~~d~~g~~~~~~~itR~ 337 (663)
T PTZ00400 258 NTSLGGEDFDQRILNYLIAEFKKQQGIDLKKDKLALQRLREAAETAKIELSSKTQTEINLPFITADQSGPKHLQIKLSRA 337 (663)
T ss_pred CCCcCHHHHHHHHHHHHHHHhhhhcCCCcccCHHHHHHHHHHHHHHHHHcCCCCceEEEEEeeccCCCCceEEEEEECHH
Confidence 999999999999999999999988888888899999999999999999999999888888876543 4789999999
Q ss_pred HHHHHhHHHHHHHHHHHHHHHHHcCCCccCcCeEEEEcCCCCcHHHHHHHHHHcCCccccccCCCchhHHhHHHHHHHHH
Q psy6736 286 RFEELNADLFRGTMEPVEKSLRDAKMDKAQIHDIVLVGGSTRIPKVQKLLQDFFNGKELNKSINPDEAVAYGAAVQAAIL 365 (1023)
Q Consensus 286 ~~e~~~~~~~~~i~~~i~~~l~~~~~~~~~i~~V~LvGG~sr~p~v~~~l~~~f~~~~i~~~~~pd~aVa~GAa~~a~~l 365 (1023)
+|+++++|+++++..+|.++|+++++.+.+|+.|+||||+||+|+|++.|+++| +.++...+|||+|||+|||++|+++
T Consensus 338 efe~l~~~l~~~~~~~i~~~L~~a~~~~~~i~~ViLvGGssriP~v~~~l~~~f-~~~~~~~~npdeaVA~GAAi~aa~l 416 (663)
T PTZ00400 338 KLEELTHDLLKKTIEPCEKCIKDAGVKKDELNDVILVGGMTRMPKVSETVKKIF-GKEPSKGVNPDEAVAMGAAIQAGVL 416 (663)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHcCCCHHHCcEEEEECCccCChHHHHHHHHHh-CCCcccCCCCccceeeccHHHHHhh
Confidence 999999999999999999999999999999999999999999999999999999 5677889999999999999999999
Q ss_pred hCCCCcceeeeEEeeeccccceEEecCceEEEEEecCCCCCCceEEEEEeccCCCCcEEEEEeecCccccccCceeeEEE
Q psy6736 366 HGDKSEEVQDLLLLDVTPLSLGIETAGGVMTALIKRNTTIPTKQTQTFTTYSDNQPGVLIQVYEGERAMTKDNNLLGKFE 445 (1023)
Q Consensus 366 ~~~~~~~~~~~~~~d~~~~sigi~~~~~~~~~ii~~~t~ip~~~~~~~~~~~d~q~~~~i~i~~g~~~~~~~~~~lg~~~ 445 (1023)
++ ..+++.+.|++|++||+++.+|.|.++||+|+++|++++.+|++..|+|+.+.|.||||++..+.+|..+|+|.
T Consensus 417 ~~----~~~~~~~~dv~p~slgi~~~~g~~~~ii~~~t~iP~~~~~~f~~~~d~q~~~~i~i~ege~~~~~~n~~lg~~~ 492 (663)
T PTZ00400 417 KG----EIKDLLLLDVTPLSLGIETLGGVFTRLINRNTTIPTKKSQVFSTAADNQTQVGIKVFQGEREMAADNKLLGQFD 492 (663)
T ss_pred cC----CccceEEEeccccceEEEecCCeeEEEEecCccCCccceeeeeeccCCCceEEEEEEEecCccCCcCceeEEEE
Confidence 86 35788999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ecCCCCCCCCCCeEEEEEEEcCCcceEEEEEeccCCcceeEEEecCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy6736 446 LTSIPPAPRGVPQIEVTFDIDANGILNVTAIEKSTGKENKITITNDRGRLSKEDIERMVNDAEKYKAEDEKQKAVISAKN 525 (1023)
Q Consensus 446 i~~~~~~~~g~~~i~v~f~~d~~g~l~v~~~~~~t~~~~~~~i~~~~~~ls~~~~~~~~~~~~~~~~~d~~~~~~~~a~N 525 (1023)
+.++|+++.|.+.|+|+|.+|.||+|+|++.+..+++...++++.. .+|+.++++++++++.++..+|+..+++.++||
T Consensus 493 i~~i~~~~~g~~~i~v~f~id~~Gil~v~a~~~~~~~~~~~~i~~~-~~ls~~ei~~~~~~~~~~~~~D~~~~~~~eakN 571 (663)
T PTZ00400 493 LVGIPPAPRGVPQIEVTFDVDANGIMNISAVDKSTGKKQEITIQSS-GGLSDEEIEKMVKEAEEYKEQDEKKKELVDAKN 571 (663)
T ss_pred EcCCCCCCCCCceEEEEEEECCCCCEEEEEEeccCCcEEEEEeecc-ccccHHHHHHHHHHHHhhhhhhhHHHHHHHHHH
Confidence 9999999999999999999999999999999999999988888764 579999999999999999999999999999999
Q ss_pred hHHHHHHHHHhhhhhhhhhccCCHHHHHHHHHhhHHHHHHHhhCCccCHHHHHHHHHHHHHHHHHHHHHHHcccC
Q psy6736 526 SLESYCFNMKSTVEDEKLKDKISDAERTQILDKCNDVIKWLDANQLAEKEEFEHKQKELEAICNPIITKLYQGSG 600 (1023)
Q Consensus 526 ~lE~~iy~~~~~l~~~~~~~~~~~~e~~~l~~~l~~~~~WL~~~~~a~~~~~~~kl~~L~~~~~pi~~r~~e~~g 600 (1023)
+||+|+|++|+.|.+ +...+++++++++.+.++++++||+++ +.+++++++++|++.+.++..+++..++
T Consensus 572 ~lEs~iy~~r~~l~e--~~~~~s~~ere~i~~~l~~~~~WL~~~---d~~~i~~k~~eL~~~l~~l~~k~y~~~~ 641 (663)
T PTZ00400 572 EAETLIYSVEKQLSD--LKDKISDADKDELKQKITKLRSTLSSE---DVDSIKDKTKQLQEASWKISQQAYKQGN 641 (663)
T ss_pred HHHHHHHHHHHHHHH--HhhhCCHHHHHHHHHHHHHHHHHHhcC---CHHHHHHHHHHHHHHHHHHHHHHHhhhc
Confidence 999999999999974 888999999999999999999999976 5789999999999999999998876543
No 7
>PTZ00186 heat shock 70 kDa precursor protein; Provisional
Probab=100.00 E-value=6e-85 Score=779.19 Aligned_cols=552 Identities=40% Similarity=0.646 Sum_probs=496.5
Q ss_pred CcccCCCCCeeEEeecccccccceeecccccccCCccccceeeEEEeccCeEEee--------cCCCceeeeeecccCCc
Q psy6736 1 MAIIHPDHPEVEITEEQSLLIQTSIMDLIGDNLGQGLIKPAFSGIRLEEGAVMLY--------CSDGYTAGWINSITGDL 72 (1023)
Q Consensus 1 vav~~~~~p~~~~~~~~~~~~~pS~~~~~~~~~g~~~~~ps~v~~~~~~~~~~~G--------~~~~~~~~~~k~~~g~~ 72 (1023)
||+|.++.|.+ +.|..|.+.+||++.+.. +..++| .+|..++..||+++|..
T Consensus 41 vA~~~~~~~~i-i~n~~g~r~tPS~V~f~~-------------------~~~lvG~~Ak~~~~~~p~~ti~~~KRliG~~ 100 (657)
T PTZ00186 41 VATMDGDKARV-LENSEGFRTTPSVVAFKG-------------------SEKLVGLAAKRQAITNPQSTFYAVKRLIGRR 100 (657)
T ss_pred EEEEeCCceEE-eecCCCCcccceEEEECC-------------------CCEEEcHHHHHhhhhCchhHHHHHHHHhccc
Confidence 46777777776 777777666676665541 122334 45677777888888863
Q ss_pred Cc-----------------------cc-cccccccCHHHHHhHhhhhccCcchHHHHHHHHHhCCcCCcceEecCCCCCH
Q psy6736 73 TP-----------------------WD-GARLKAVSAQELSRGVKAIFTAPDILKKKTSEDILRKVDGQNEGLIPAYFNI 128 (1023)
Q Consensus 73 ~~-----------------------~~-~~~~~~~~~~~v~a~~L~~~~~~~~~l~~~a~~~~~~~~~~~vitVPa~~~~ 128 (1023)
.- .+ ...+..++|++|++++| ++|++.|+.++|.++.++|||||+||++
T Consensus 101 ~~d~~v~~~~~~~p~~vv~~~~~~~~i~~~~~~~~speeisa~iL-------~~Lk~~Ae~~lg~~v~~aVITVPayF~~ 173 (657)
T PTZ00186 101 FEDEHIQKDIKNVPYKIVRAGNGDAWVQDGNGKQYSPSQIGAFVL-------EKMKETAENFLGHKVSNAVVTCPAYFND 173 (657)
T ss_pred cccHHHHHhhccCcEEEEEcCCCceEEEeCCCeEEcHHHHHHHHH-------HHHHHHHHHHhCCccceEEEEECCCCCh
Confidence 10 00 01245799999999999 9999999999999999999999999999
Q ss_pred HHHHHHHHHHHHcCCceeeeecchHHHHHHhccccccCccccccCCCCCcEEEEEEeCCceEEEEEEEEeCCEEEEEEec
Q psy6736 129 SSVKSTKDSGTIAGLNVLRIINEPTAAAIAYGLDKKVGSTAVEYNGSGERNVLIFDLGGGTFDVSILTIEDGIFEVKSTA 208 (1023)
Q Consensus 129 ~qr~~l~~Aa~~AGl~~~~li~Ep~AAal~y~~~~~~~~~~~~~~~~~~~~vlV~D~GggT~dvsv~~~~~~~~~v~~~~ 208 (1023)
.||+++++||++|||++++||+||+|||++|+.... .+.+++|||+||||||+|++++.++.++++++.
T Consensus 174 ~qR~at~~Aa~~AGl~v~rlInEPtAAAlayg~~~~-----------~~~~vlV~DlGGGT~DvSil~~~~g~~~V~at~ 242 (657)
T PTZ00186 174 AQRQATKDAGTIAGLNVIRVVNEPTAAALAYGMDKT-----------KDSLIAVYDLGGGTFDISVLEIAGGVFEVKATN 242 (657)
T ss_pred HHHHHHHHHHHHcCCCeEEEEcChHHHHHHHhccCC-----------CCCEEEEEECCCCeEEEEEEEEeCCEEEEEEec
Confidence 999999999999999999999999999999997653 467899999999999999999999999999999
Q ss_pred CCCCccHHHHHHHHHHHHHHHHHhhhccCccccHHHHHHHHHHHHHHhHHcCCCCceEEEEecccCC----ceeEEEecH
Q psy6736 209 GDTHLGGEDFDNRMVNHFVQEFKRKYKKDLTTNKRALRRLRTACERAKRTLSSSTQASIEIDSLFEG----VDFYTSITR 284 (1023)
Q Consensus 209 ~~~~lGG~~~D~~l~~~l~~~~~~~~~~~~~~~~~~~~~L~~~ae~~K~~Ls~~~~~~i~i~~~~~~----~~~~~~itr 284 (1023)
||.++||+|||.+|++|+.++|..+++.++..+++++.+|+.+||++|+.||.+..+.+.++.+..+ .++.++|||
T Consensus 243 Gd~~LGG~DfD~~l~~~~~~~f~~~~~~d~~~~~~~~~rL~~~aEkaK~~LS~~~~~~i~i~~i~~~~~g~~~~~~~ItR 322 (657)
T PTZ00186 243 GDTHLGGEDFDLALSDYILEEFRKTSGIDLSKERMALQRVREAAEKAKCELSSAMETEVNLPFITANADGAQHIQMHISR 322 (657)
T ss_pred CCCCCCchhHHHHHHHHHHHHHhhhcCCCcccCHHHHHHHHHHHHHHHHHhCCCCceEEEEeeeccCCCCCcceEEEecH
Confidence 9999999999999999999999999988888889999999999999999999999999988876432 458899999
Q ss_pred HHHHHHhHHHHHHHHHHHHHHHHHcCCCccCcCeEEEEcCCCCcHHHHHHHHHHcCCccccccCCCchhHHhHHHHHHHH
Q psy6736 285 ARFEELNADLFRGTMEPVEKSLRDAKMDKAQIHDIVLVGGSTRIPKVQKLLQDFFNGKELNKSINPDEAVAYGAAVQAAI 364 (1023)
Q Consensus 285 ~~~e~~~~~~~~~i~~~i~~~l~~~~~~~~~i~~V~LvGG~sr~p~v~~~l~~~f~~~~i~~~~~pd~aVa~GAa~~a~~ 364 (1023)
++|++++++++++++.+++++|+++++.+.+|+.|+||||+||||.|++.|+++| +.++...+|||+|||+|||++|++
T Consensus 323 ~efe~l~~~l~~r~~~~v~~~L~~a~~~~~dId~VvLVGGssriP~V~~~l~~~f-g~~~~~~~nPdeaVA~GAAi~a~~ 401 (657)
T PTZ00186 323 SKFEGITQRLIERSIAPCKQCMKDAGVELKEINDVVLVGGMTRMPKVVEEVKKFF-QKDPFRGVNPDEAVALGAATLGGV 401 (657)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHcCCChhhCCEEEEECCcccChHHHHHHHHHh-CCCccccCCCchHHHHhHHHHHHH
Confidence 9999999999999999999999999999999999999999999999999999999 556678899999999999999999
Q ss_pred HhCCCCcceeeeEEeeeccccceEEecCceEEEEEecCCCCCCceEEEEEeccCCCCcEEEEEeecCccccccCceeeEE
Q psy6736 365 LHGDKSEEVQDLLLLDVTPLSLGIETAGGVMTALIKRNTTIPTKQTQTFTTYSDNQPGVLIQVYEGERAMTKDNNLLGKF 444 (1023)
Q Consensus 365 l~~~~~~~~~~~~~~d~~~~sigi~~~~~~~~~ii~~~t~ip~~~~~~~~~~~d~q~~~~i~i~~g~~~~~~~~~~lg~~ 444 (1023)
+++ .++++.+.|++|++||+++.+|.+.+|||||++||++++..|++..|+|+.+.|+||||++..+.+|..||+|
T Consensus 402 l~~----~~~~~~l~Dv~p~slgie~~~g~~~~iI~rnt~iP~~~~~~f~t~~dnQ~~v~i~i~qGe~~~~~~n~~lg~~ 477 (657)
T PTZ00186 402 LRG----DVKGLVLLDVTPLSLGIETLGGVFTRMIPKNTTIPTKKSQTFSTAADNQTQVGIKVFQGEREMAADNQMMGQF 477 (657)
T ss_pred hcc----ccCceEEEeeccccccceecCCEEEEEEeCCCEeeEEEeeccccccCCCceEEEEEEEecccccccccccceE
Confidence 987 3568899999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EecCCCCCCCCCCeEEEEEEEcCCcceEEEEEeccCCcceeEEEecCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy6736 445 ELTSIPPAPRGVPQIEVTFDIDANGILNVTAIEKSTGKENKITITNDRGRLSKEDIERMVNDAEKYKAEDEKQKAVISAK 524 (1023)
Q Consensus 445 ~i~~~~~~~~g~~~i~v~f~~d~~g~l~v~~~~~~t~~~~~~~i~~~~~~ls~~~~~~~~~~~~~~~~~d~~~~~~~~a~ 524 (1023)
.+.++|+.|+|.+.|+|+|++|.||+|+|++.+..||++..++|... ..|++++++++++..+++..+|+..+++.+++
T Consensus 478 ~l~~ip~~~~G~~~I~Vtf~iD~nGiL~V~a~d~~tg~~~~~~i~~~-~~ls~~~i~~~~~~~~~~~~~d~~~~~~~~~~ 556 (657)
T PTZ00186 478 DLVGIPPAPRGVPQIEVTFDIDANGICHVTAKDKATGKTQNITITAN-GGLSKEQIEQMIRDSEQHAEADRVKRELVEVR 556 (657)
T ss_pred EEcCCCCCCCCCCcEEEEEEEcCCCEEEEEEEEccCCcEEEEEeccC-ccCCHHHHHHHHHHHHhhhhhhHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999864 46999999999999999999999999999999
Q ss_pred HhHHHHHHHHHhhhhhhhhhccCCHHHHHHHHHhhHHHHHHHhhCCccCHHHHHHHHHHHHHHHHHHHHHHHcccC
Q psy6736 525 NSLESYCFNMKSTVEDEKLKDKISDAERTQILDKCNDVIKWLDANQLAEKEEFEHKQKELEAICNPIITKLYQGSG 600 (1023)
Q Consensus 525 N~lE~~iy~~~~~l~~~~~~~~~~~~e~~~l~~~l~~~~~WL~~~~~a~~~~~~~kl~~L~~~~~pi~~r~~e~~g 600 (1023)
|++|.+++.++..+.+ . ..+++++++.+.+.+...++||..+ +.+.+.+++++++|++.+.++..+++..++
T Consensus 557 ~~~~~~~~~~~~~~~~--~-~~~~~~~~~~~~~~~~~~~~~l~~~-~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~ 628 (657)
T PTZ00186 557 NNAETQLTTAERQLGE--W-KYVSDAEKENVKTLVAELRKAMENP-NVAKDDLAAATDKLQKAVMECGRTEYQQAA 628 (657)
T ss_pred HHHHHHHHHHHHHhhh--h-ccCCHHHHHHHHHHHHHHHHHHhcC-CcCHHHHHHHHHHHHHHHHHHHHHHHhhcc
Confidence 9999999999999964 2 4689999999999999999999843 346789999999999999999988765443
No 8
>KOG0101|consensus
Probab=100.00 E-value=6.5e-86 Score=746.31 Aligned_cols=576 Identities=70% Similarity=1.004 Sum_probs=524.5
Q ss_pred CcccCCCCCeeEEeecccccccceeeccccccc--C-----CccccceeeEEEeccCeEEee--cCCCceeeeeecccCC
Q psy6736 1 MAIIHPDHPEVEITEEQSLLIQTSIMDLIGDNL--G-----QGLIKPAFSGIRLEEGAVMLY--CSDGYTAGWINSITGD 71 (1023)
Q Consensus 1 vav~~~~~p~~~~~~~~~~~~~pS~~~~~~~~~--g-----~~~~~ps~v~~~~~~~~~~~G--~~~~~~~~~~k~~~g~ 71 (1023)
||+|.++...+ +.|++|++.|||.+++.++-. | +....|.-.-++ -+++. | ..+.......++|...
T Consensus 21 v~v~~~~~v~i-ian~~g~rttPs~vaf~~~e~~vg~~a~~qv~~np~ntv~~--~krli-Gr~f~d~~v~~~~k~~pf~ 96 (620)
T KOG0101|consen 21 VGVYQSGKVEI-IANDQGNRTTPSVVAFTDTERLIGDAAKNQVARNPDNTVFD--AKRLI-GRFFDDPEVQSDMKLWPFK 96 (620)
T ss_pred eeeEcCCccee-eeccccCccccceeeecccccchhhhhhhhhhcCCcceeee--hhhhc-CccccchhhHhHhhcCCcc
Confidence 68888888888 999999999999999996421 2 223344322111 11222 3 1222222222333211
Q ss_pred --------cC--ccccccccccCHHHHHhHhhhhccCcchHHHHHHHHHhCCcCCcceEecCCCCCHHHHHHHHHHHHHc
Q psy6736 72 --------LT--PWDGARLKAVSAQELSRGVKAIFTAPDILKKKTSEDILRKVDGQNEGLIPAYFNISSVKSTKDSGTIA 141 (1023)
Q Consensus 72 --------~~--~~~~~~~~~~~~~~v~a~~L~~~~~~~~~l~~~a~~~~~~~~~~~vitVPa~~~~~qr~~l~~Aa~~A 141 (1023)
.. +........|.|+++++++| .++++.|+.++|.++.++|+|||+||++.||+++.+|+.+|
T Consensus 97 V~~~~~~~~~i~~~~~~~~~~f~peeiss~~L-------~klke~Ae~~Lg~~v~~aviTVPa~F~~~Qr~at~~A~~ia 169 (620)
T KOG0101|consen 97 VISDQGGKPKIQVTYKGETKSFNPEEISSMVL-------TKLKETAEAYLGKTVKKAVVTVPAYFNDSQRAATKDAALIA 169 (620)
T ss_pred cccccCCcceEEecccccceeeeeeeeeehhc-------cccHHHHHHHhcCceeeEEEEecCCcCHHHHHHHHHHHHhc
Confidence 11 12223346899999999999 99999999999999999999999999999999999999999
Q ss_pred CCceeeeecchHHHHHHhccccccCccccccCCCCCcEEEEEEeCCceEEEEEEEEeCCEEEEEEecCCCCccHHHHHHH
Q psy6736 142 GLNVLRIINEPTAAAIAYGLDKKVGSTAVEYNGSGERNVLIFDLGGGTFDVSILTIEDGIFEVKSTAGDTHLGGEDFDNR 221 (1023)
Q Consensus 142 Gl~~~~li~Ep~AAal~y~~~~~~~~~~~~~~~~~~~~vlV~D~GggT~dvsv~~~~~~~~~v~~~~~~~~lGG~~~D~~ 221 (1023)
||+++++|+||+|||++|++.+... ...+++|+|+||||||+|++.+.++.+.+.++.||.++||.+||+.
T Consensus 170 Gl~vlrii~EPtAaalAygl~k~~~---------~~~~VlI~DlGggtfdvs~l~i~gG~~~vkat~gd~~lGGedf~~~ 240 (620)
T KOG0101|consen 170 GLNVLRIINEPTAAALAYGLDKKVL---------GERNVLIFDLGGGTFDVSVLSLEGGIFEVKATAGDTHLGGEDFDNK 240 (620)
T ss_pred CCceeeeecchHHHHHHhhcccccc---------ceeeEEEEEcCCCceeeeeEEeccchhhhhhhcccccccchhhhHH
Confidence 9999999999999999999776521 6788999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhhhccCccccHHHHHHHHHHHHHHhHHcCCCCceEEEEecccCCceeEEEecHHHHHHHhHHHHHHHHHH
Q psy6736 222 MVNHFVQEFKRKYKKDLTTNKRALRRLRTACERAKRTLSSSTQASIEIDSLFEGVDFYTSITRARFEELNADLFRGTMEP 301 (1023)
Q Consensus 222 l~~~l~~~~~~~~~~~~~~~~~~~~~L~~~ae~~K~~Ls~~~~~~i~i~~~~~~~~~~~~itr~~~e~~~~~~~~~i~~~ 301 (1023)
|++|+..+|+.+++.++..+++++.+|+.+||.+|+.||....+.+.++++++|.++...|+|.+|+.++.+++..++.+
T Consensus 241 l~~h~~~ef~~k~~~d~~~n~r~l~rLR~a~E~aKr~LS~~~~~~i~vdsL~~g~d~~~~itrarfe~l~~dlf~~~~~~ 320 (620)
T KOG0101|consen 241 LVNHFAAEFKRKAGKDIGGNARALRRLRTACERAKRTLSSSTQASIEIDSLYEGIDFYTSITRARFEELNADLFRSTLEP 320 (620)
T ss_pred HHHHHHHHHHHhhccccccchHHHHHHHHHHHHHHhhhcccccceeccchhhccccccceeehhhhhhhhhHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHcCCCccCcCeEEEEcCCCCcHHHHHHHHHHcCCccccccCCCchhHHhHHHHHHHHHhCCCCcceeeeEEeee
Q psy6736 302 VEKSLRDAKMDKAQIHDIVLVGGSTRIPKVQKLLQDFFNGKELNKSINPDEAVAYGAAVQAAILHGDKSEEVQDLLLLDV 381 (1023)
Q Consensus 302 i~~~l~~~~~~~~~i~~V~LvGG~sr~p~v~~~l~~~f~~~~i~~~~~pd~aVa~GAa~~a~~l~~~~~~~~~~~~~~d~ 381 (1023)
+.++|+++++.+.+|+.|+||||++|+|.+|..++++|+++.+..++|||++||+|||++||.+++.....+.++.+.|+
T Consensus 321 v~~~L~da~~dk~~i~~vvlVGGstriPk~~~ll~d~f~~k~~~~sinpDeavA~GAavqaa~~~g~~~~~~~~l~lid~ 400 (620)
T KOG0101|consen 321 VEKALKDAKLDKSDIDEVVLVGGSTRIPKVQKLLEDFFNGKELNKSINPDEAVAYGAAVQAAILSGDKSLNIQDLLLIDV 400 (620)
T ss_pred HHHHHHhhccCccCCceeEEecCcccchHHHHHHHHHhcccccccCCCHHHHHHhhHHHHhhhccCCccccccceeeeec
Confidence 99999999999999999999999999999999999999999999999999999999999999999987777899999999
Q ss_pred ccccceEEecCceEEEEEecCCCCCCceEEEEEeccCCCCcEEEEEeecCccccccCceeeEEEecCCCCCCCCCCeEEE
Q psy6736 382 TPLSLGIETAGGVMTALIKRNTTIPTKQTQTFTTYSDNQPGVLIQVYEGERAMTKDNNLLGKFELTSIPPAPRGVPQIEV 461 (1023)
Q Consensus 382 ~~~sigi~~~~~~~~~ii~~~t~ip~~~~~~~~~~~d~q~~~~i~i~~g~~~~~~~~~~lg~~~i~~~~~~~~g~~~i~v 461 (1023)
.|.++|+++.++.|.++|++||.+|+.++.+|+|+.|+|+.+.|.||+|++...++|..+|.|.+.++|++|+|++.|++
T Consensus 401 ~pl~~gve~a~~~~~~~i~~~t~~P~~k~~~ftt~~dnQp~V~I~VyEger~~~kdn~~lg~feL~gippaprgvp~Iev 480 (620)
T KOG0101|consen 401 APLSLGVETAGGVFTVLIPRNTSIPTKKTQTFTTYSDNQPGVLIQVYEGERAMTKDNNLLGKFELTGIPPAPRGVPQIEV 480 (620)
T ss_pred ccccccccccCCcceeeeecccccceeeeeeeeeecCCCCceeEEEEeccccccccccccceeeecCCCccccCCcceeE
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEEEcCCcceEEEEEeccCCcceeEEEecCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHhhhhhh
Q psy6736 462 TFDIDANGILNVTAIEKSTGKENKITITNDRGRLSKEDIERMVNDAEKYKAEDEKQKAVISAKNSLESYCFNMKSTVEDE 541 (1023)
Q Consensus 462 ~f~~d~~g~l~v~~~~~~t~~~~~~~i~~~~~~ls~~~~~~~~~~~~~~~~~d~~~~~~~~a~N~lE~~iy~~~~~l~~~ 541 (1023)
+|.+|.||+|.|++++..||+...+++++..++||.++|+++....+.+..+|+..+.+.+++|.||+|+|+++..++++
T Consensus 481 tfdiD~ngiL~Vta~d~stgK~~~i~i~n~~grls~~~Ierm~~ea~~~~~~d~~~~~~v~~~~~le~~~f~~~~~~~~~ 560 (620)
T KOG0101|consen 481 TFDIDANGILNVTAVDKSTGKENKITITNDKGRLSKEEIERMVQEAEKYKAEDEKQKDKVAAKNSLESYAFNMKATVEDE 560 (620)
T ss_pred EEecCCCcEEEEeeccccCCccceEEEecccceeehhhhhhhhhhhhhccccCHHHHHHHHHHhhHHHHHHhhhhhhhhh
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999875
Q ss_pred hhhccCCHHHHHHHHHhhHHHHHHHhhCCccCHHHHHHHHHHHHHHHHHHHHHHHcc
Q psy6736 542 KLKDKISDAERTQILDKCNDVIKWLDANQLAEKEEFEHKQKELEAICNPIITKLYQG 598 (1023)
Q Consensus 542 ~~~~~~~~~e~~~l~~~l~~~~~WL~~~~~a~~~~~~~kl~~L~~~~~pi~~r~~e~ 598 (1023)
. ..++++++.++.+++.++..||+.+..+.+++|+.|.++|+..+.||+.+++.+
T Consensus 561 ~--~~i~~~~~~~~~~~~~~~i~wl~~~~~~~~~e~e~k~~el~~~~~p~~~~~~~~ 615 (620)
T KOG0101|consen 561 K--GKINEEDKQKILDKCNEVINWLDKNQLAEKEEFEHKQKELELVCNPIISKLYQG 615 (620)
T ss_pred c--cccChhhhhhHHHHHHHHHHHhhhcccccccHHHHHHHHHHhhccHHHHhhhcc
Confidence 4 899999999999999999999999988889999999999999999999999876
No 9
>PRK00290 dnaK molecular chaperone DnaK; Provisional
Probab=100.00 E-value=1.1e-83 Score=778.19 Aligned_cols=551 Identities=48% Similarity=0.748 Sum_probs=502.6
Q ss_pred CcccCCCCCeeEEeecccccccceeecccccccCCccccceeeEEEeccCeEEee--------cCCCceeeeeecccCCc
Q psy6736 1 MAIIHPDHPEVEITEEQSLLIQTSIMDLIGDNLGQGLIKPAFSGIRLEEGAVMLY--------CSDGYTAGWINSITGDL 72 (1023)
Q Consensus 1 vav~~~~~p~~~~~~~~~~~~~pS~~~~~~~~~g~~~~~ps~v~~~~~~~~~~~G--------~~~~~~~~~~k~~~g~~ 72 (1023)
||+|.++.|.+ +.|++|++.+||++.+.+ ++.+.+| ..|..++..+|+++|..
T Consensus 16 va~~~~g~~~i-i~n~~g~r~~PS~V~f~~------------------~~~~~vG~~A~~~~~~~p~~~i~~~Kr~iG~~ 76 (627)
T PRK00290 16 VAVMEGGEPKV-IENAEGARTTPSVVAFTK------------------DGERLVGQPAKRQAVTNPENTIFSIKRLMGRR 76 (627)
T ss_pred EEEEECCEEEE-EECCCCCcccceEEEEeC------------------CCCEEEcHHHHHhhhhCchhhHHHHHHHhCCC
Confidence 57788888887 888888887787776642 2223334 45666777788888865
Q ss_pred C---------------------ccccccccccCHHHHHhHhhhhccCcchHHHHHHHHHhCCcCCcceEecCCCCCHHHH
Q psy6736 73 T---------------------PWDGARLKAVSAQELSRGVKAIFTAPDILKKKTSEDILRKVDGQNEGLIPAYFNISSV 131 (1023)
Q Consensus 73 ~---------------------~~~~~~~~~~~~~~v~a~~L~~~~~~~~~l~~~a~~~~~~~~~~~vitVPa~~~~~qr 131 (1023)
. ..+...+..++|+++++++| ++|++.|+.++|.++.++|||||+||++.||
T Consensus 77 ~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~peel~a~iL-------~~lk~~ae~~~g~~v~~~VItVPa~f~~~qR 149 (627)
T PRK00290 77 DEEVQKDIKLVPYKIVKADNGDAWVEIDGKKYTPQEISAMIL-------QKLKKDAEDYLGEKVTEAVITVPAYFNDAQR 149 (627)
T ss_pred chHHHHHhhcCCeEEEEcCCCceEEEECCEEEcHHHHHHHHH-------HHHHHHHHHHhCCCCceEEEEECCCCCHHHH
Confidence 1 11122345799999999999 9999999999999999999999999999999
Q ss_pred HHHHHHHHHcCCceeeeecchHHHHHHhccccccCccccccCCCCCcEEEEEEeCCceEEEEEEEEeCCEEEEEEecCCC
Q psy6736 132 KSTKDSGTIAGLNVLRIINEPTAAAIAYGLDKKVGSTAVEYNGSGERNVLIFDLGGGTFDVSILTIEDGIFEVKSTAGDT 211 (1023)
Q Consensus 132 ~~l~~Aa~~AGl~~~~li~Ep~AAal~y~~~~~~~~~~~~~~~~~~~~vlV~D~GggT~dvsv~~~~~~~~~v~~~~~~~ 211 (1023)
+++++||++|||++++||+||+|||++|+.... .+.++|||||||||||+|++++.++.++++++.|+.
T Consensus 150 ~a~~~Aa~~AGl~v~~li~EptAAAl~y~~~~~-----------~~~~vlV~D~GggT~dvsv~~~~~~~~~vla~~gd~ 218 (627)
T PRK00290 150 QATKDAGKIAGLEVLRIINEPTAAALAYGLDKK-----------GDEKILVYDLGGGTFDVSILEIGDGVFEVLSTNGDT 218 (627)
T ss_pred HHHHHHHHHcCCceEEEecchHHHHHHhhhccC-----------CCCEEEEEECCCCeEEEEEEEEeCCeEEEEEecCCC
Confidence 999999999999999999999999999987653 468899999999999999999999999999999999
Q ss_pred CccHHHHHHHHHHHHHHHHHhhhccCccccHHHHHHHHHHHHHHhHHcCCCCceEEEEecccCC----ceeEEEecHHHH
Q psy6736 212 HLGGEDFDNRMVNHFVQEFKRKYKKDLTTNKRALRRLRTACERAKRTLSSSTQASIEIDSLFEG----VDFYTSITRARF 287 (1023)
Q Consensus 212 ~lGG~~~D~~l~~~l~~~~~~~~~~~~~~~~~~~~~L~~~ae~~K~~Ls~~~~~~i~i~~~~~~----~~~~~~itr~~~ 287 (1023)
++||.+||.+|++|+.++|..+++.++..+++++.+|+.+||++|+.||.+..+.+.++.+..+ .++.++|||++|
T Consensus 219 ~lGG~d~D~~l~~~~~~~~~~~~~~~~~~~~~~~~rL~~~ae~aK~~LS~~~~~~i~i~~~~~d~~g~~~~~~~itR~~f 298 (627)
T PRK00290 219 HLGGDDFDQRIIDYLADEFKKENGIDLRKDKMALQRLKEAAEKAKIELSSAQQTEINLPFITADASGPKHLEIKLTRAKF 298 (627)
T ss_pred CcChHHHHHHHHHHHHHHHHHhhCCCcccCHHHHHHHHHHHHHHHHHcCCCCeEEEEEeecccCCCCCeEEEEEECHHHH
Confidence 9999999999999999999999988888899999999999999999999999999988876542 578899999999
Q ss_pred HHHhHHHHHHHHHHHHHHHHHcCCCccCcCeEEEEcCCCCcHHHHHHHHHHcCCccccccCCCchhHHhHHHHHHHHHhC
Q psy6736 288 EELNADLFRGTMEPVEKSLRDAKMDKAQIHDIVLVGGSTRIPKVQKLLQDFFNGKELNKSINPDEAVAYGAAVQAAILHG 367 (1023)
Q Consensus 288 e~~~~~~~~~i~~~i~~~l~~~~~~~~~i~~V~LvGG~sr~p~v~~~l~~~f~~~~i~~~~~pd~aVa~GAa~~a~~l~~ 367 (1023)
+++++++++++..+|+++|+++++.+.+|+.|+||||+||+|+|++.|++.| +.++..++||++|||+|||++|+.+++
T Consensus 299 e~l~~~l~~~~~~~i~~~l~~a~~~~~~id~ViLvGGssriP~v~~~l~~~f-g~~~~~~~npdeava~GAa~~aa~l~~ 377 (627)
T PRK00290 299 EELTEDLVERTIEPCKQALKDAGLSVSDIDEVILVGGSTRMPAVQELVKEFF-GKEPNKGVNPDEVVAIGAAIQGGVLAG 377 (627)
T ss_pred HHHHHHHHHHHHHHHHHHHHHcCCChhhCcEEEEECCcCCChHHHHHHHHHh-CCCCCcCcCChHHHHHhHHHHHHHhcC
Confidence 9999999999999999999999999999999999999999999999999999 677888999999999999999999986
Q ss_pred CCCcceeeeEEeeeccccceEEecCceEEEEEecCCCCCCceEEEEEeccCCCCcEEEEEeecCccccccCceeeEEEec
Q psy6736 368 DKSEEVQDLLLLDVTPLSLGIETAGGVMTALIKRNTTIPTKQTQTFTTYSDNQPGVLIQVYEGERAMTKDNNLLGKFELT 447 (1023)
Q Consensus 368 ~~~~~~~~~~~~d~~~~sigi~~~~~~~~~ii~~~t~ip~~~~~~~~~~~d~q~~~~i~i~~g~~~~~~~~~~lg~~~i~ 447 (1023)
.++++.+.|++|++||+++.++.+.+|||+|+++|++++++|++..++|+.+.|.+|||++....+|..||+|.+.
T Consensus 378 ----~~~~~~~~d~~~~slgi~~~~~~~~~ii~~~t~~P~~~~~~f~~~~d~q~~~~i~v~~ge~~~~~~~~~lg~~~i~ 453 (627)
T PRK00290 378 ----DVKDVLLLDVTPLSLGIETLGGVMTKLIERNTTIPTKKSQVFSTAADNQPAVTIHVLQGEREMAADNKSLGRFNLT 453 (627)
T ss_pred ----CccceeeeeccceEEEEEecCCeEEEEecCCCcCCccceEEEEecCCCcceEEEEEEEecccccCcCceEEEEEEC
Confidence 3678999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCCCCCeEEEEEEEcCCcceEEEEEeccCCcceeEEEecCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhH
Q psy6736 448 SIPPAPRGVPQIEVTFDIDANGILNVTAIEKSTGKENKITITNDRGRLSKEDIERMVNDAEKYKAEDEKQKAVISAKNSL 527 (1023)
Q Consensus 448 ~~~~~~~g~~~i~v~f~~d~~g~l~v~~~~~~t~~~~~~~i~~~~~~ls~~~~~~~~~~~~~~~~~d~~~~~~~~a~N~l 527 (1023)
++|+.+.|.+.|+|+|++|.||+|+|++.+..+++...+++... .+|+.++++++++++.++..+|+..+++.++||+|
T Consensus 454 ~~~~~~~g~~~i~v~f~~d~~gil~v~a~~~~~~~~~~~~i~~~-~~ls~e~i~~~~~~~~~~~~~d~~~~~~~eakN~l 532 (627)
T PRK00290 454 GIPPAPRGVPQIEVTFDIDANGIVHVSAKDKGTGKEQSITITAS-SGLSDEEIERMVKDAEANAEEDKKRKELVEARNQA 532 (627)
T ss_pred CCCCCCCCCceEEEEEEECCCceEEEEEEEccCCceeEEEeccc-cccCHHHHHHHHHHHHHhhhcchhHHHHHHHHHHH
Confidence 99999999989999999999999999999999999998888765 56999999999999999999999999999999999
Q ss_pred HHHHHHHHhhhhhhhhhccCCHHHHHHHHHhhHHHHHHHhhCCccCHHHHHHHHHHHHHHHHHHHHHHHccc
Q psy6736 528 ESYCFNMKSTVEDEKLKDKISDAERTQILDKCNDVIKWLDANQLAEKEEFEHKQKELEAICNPIITKLYQGS 599 (1023)
Q Consensus 528 E~~iy~~~~~l~~~~~~~~~~~~e~~~l~~~l~~~~~WL~~~~~a~~~~~~~kl~~L~~~~~pi~~r~~e~~ 599 (1023)
|+|+|.+|+.|+ ++..++++++++++.+.++++++||+++ +.++|++++++|+++++++..|+++.+
T Consensus 533 e~~i~~~~~~l~--~~~~~~~~~e~~~i~~~l~~~~~wL~~~---~~~~i~~k~~~L~~~~~~~~~~~~~~~ 599 (627)
T PRK00290 533 DSLIYQTEKTLK--ELGDKVPADEKEKIEAAIKELKEALKGE---DKEAIKAKTEELTQASQKLGEAMYQQA 599 (627)
T ss_pred HHHHHHHHHHHH--HHhccCCHHHHHHHHHHHHHHHHHHhcC---CHHHHHHHHHHHHHHHHHHHHHHHhhc
Confidence 999999999997 3778999999999999999999999976 678999999999999999999987643
No 10
>TIGR02350 prok_dnaK chaperone protein DnaK. Members of this family are the chaperone DnaK, of the DnaK-DnaJ-GrpE chaperone system. All members of the seed alignment were taken from completely sequenced bacterial or archaeal genomes and (except for Mycoplasma sequence) found clustered with other genes of this systems. This model excludes DnaK homologs that are not DnaK itself, such as the heat shock cognate protein HscA (TIGR01991). However, it is not designed to distinguish among DnaK paralogs in eukaryotes. Note that a number of dnaK genes have shadow ORFs in the same reverse (relative to dnaK) reading frame, a few of which have been assigned glutamate dehydrogenase activity. The significance of this observation is unclear; lengths of such shadow ORFs are highly variable as if the presumptive protein product is not conserved.
Probab=100.00 E-value=1.6e-82 Score=766.49 Aligned_cols=549 Identities=49% Similarity=0.729 Sum_probs=498.9
Q ss_pred CcccCCCCCeeEEeecccccccceeecccccccCCccccceeeEEEeccCeEEee--------cCCCceeeeeecccCCc
Q psy6736 1 MAIIHPDHPEVEITEEQSLLIQTSIMDLIGDNLGQGLIKPAFSGIRLEEGAVMLY--------CSDGYTAGWINSITGDL 72 (1023)
Q Consensus 1 vav~~~~~p~~~~~~~~~~~~~pS~~~~~~~~~g~~~~~ps~v~~~~~~~~~~~G--------~~~~~~~~~~k~~~g~~ 72 (1023)
||+|.++.|.+ +.|++|.+.+||++.+.++ +.+++| ..|..++..||+++|..
T Consensus 14 va~~~~g~~~i-i~n~~~~~~~PS~V~~~~~------------------~~~~vG~~A~~~~~~~p~~~i~~~Kr~iG~~ 74 (595)
T TIGR02350 14 VAVMEGGEPVV-IPNAEGARTTPSVVAFTKN------------------GERLVGQPAKRQAVTNPENTIYSIKRFMGRR 74 (595)
T ss_pred EEEEECCEEEE-EECCCCCcccCeEEEEeCC------------------CCEEECHHHHHhhhhCchhhhHHHHHHhCCC
Confidence 57788888887 7888887777777766522 233334 45666777788888874
Q ss_pred C--------------------ccccccccccCHHHHHhHhhhhccCcchHHHHHHHHHhCCcCCcceEecCCCCCHHHHH
Q psy6736 73 T--------------------PWDGARLKAVSAQELSRGVKAIFTAPDILKKKTSEDILRKVDGQNEGLIPAYFNISSVK 132 (1023)
Q Consensus 73 ~--------------------~~~~~~~~~~~~~~v~a~~L~~~~~~~~~l~~~a~~~~~~~~~~~vitVPa~~~~~qr~ 132 (1023)
. +.+...+..++|+++++++| ++|++.|+.++|.++.++|||||+||++.||+
T Consensus 75 ~~~~~~~~~~~~~~v~~~~~~~~~~v~~~~~~peel~a~~L-------~~l~~~a~~~~~~~v~~~VItVPa~f~~~qR~ 147 (595)
T TIGR02350 75 FDEVTEEAKRVPYKVVGDGGDVRVKVDGKEYTPQEISAMIL-------QKLKKDAEAYLGEKVTEAVITVPAYFNDAQRQ 147 (595)
T ss_pred chHHHHHhhcCCeeEEcCCCceEEEECCEEecHHHHHHHHH-------HHHHHHHHHHhCCCCCeEEEEECCCCCHHHHH
Confidence 2 11122345789999999999 99999999999999999999999999999999
Q ss_pred HHHHHHHHcCCceeeeecchHHHHHHhccccccCccccccCCCCCcEEEEEEeCCceEEEEEEEEeCCEEEEEEecCCCC
Q psy6736 133 STKDSGTIAGLNVLRIINEPTAAAIAYGLDKKVGSTAVEYNGSGERNVLIFDLGGGTFDVSILTIEDGIFEVKSTAGDTH 212 (1023)
Q Consensus 133 ~l~~Aa~~AGl~~~~li~Ep~AAal~y~~~~~~~~~~~~~~~~~~~~vlV~D~GggT~dvsv~~~~~~~~~v~~~~~~~~ 212 (1023)
++++||++||+++++||+||+|||++|+.... ..+.++|||||||||||+|++++.++.++++++.|+..
T Consensus 148 a~~~Aa~~AGl~v~~li~EptAAAl~y~~~~~----------~~~~~vlV~D~Gggt~dvsv~~~~~~~~~v~~~~gd~~ 217 (595)
T TIGR02350 148 ATKDAGKIAGLEVLRIINEPTAAALAYGLDKS----------KKDEKILVFDLGGGTFDVSILEIGDGVFEVLSTAGDTH 217 (595)
T ss_pred HHHHHHHHcCCceEEEecchHHHHHHHhhccc----------CCCcEEEEEECCCCeEEEEEEEecCCeEEEEEecCCcc
Confidence 99999999999999999999999999987652 15688999999999999999999999999999999999
Q ss_pred ccHHHHHHHHHHHHHHHHHhhhccCccccHHHHHHHHHHHHHHhHHcCCCCceEEEEecccC----CceeEEEecHHHHH
Q psy6736 213 LGGEDFDNRMVNHFVQEFKRKYKKDLTTNKRALRRLRTACERAKRTLSSSTQASIEIDSLFE----GVDFYTSITRARFE 288 (1023)
Q Consensus 213 lGG~~~D~~l~~~l~~~~~~~~~~~~~~~~~~~~~L~~~ae~~K~~Ls~~~~~~i~i~~~~~----~~~~~~~itr~~~e 288 (1023)
+||.+||..|++|+.++|..+++.++..+++++.+|+.+||++|+.||.+.++.+.++.+.. +.++.++|||++|+
T Consensus 218 lGG~d~D~~l~~~~~~~~~~~~~~~~~~~~~~~~~L~~~ae~aK~~LS~~~~~~i~i~~~~~~~~g~~~~~~~itr~~fe 297 (595)
T TIGR02350 218 LGGDDFDQRIIDWLADEFKKEEGIDLSKDKMALQRLKEAAEKAKIELSSVLSTEINLPFITADASGPKHLEMTLTRAKFE 297 (595)
T ss_pred cCchhHHHHHHHHHHHHHHHhhCCCcccCHHHHHHHHHHHHHHHHHcCCCCceEEEeeecccCCCCCeeEEEEEeHHHHH
Confidence 99999999999999999999998888889999999999999999999999999998887653 35788999999999
Q ss_pred HHhHHHHHHHHHHHHHHHHHcCCCccCcCeEEEEcCCCCcHHHHHHHHHHcCCccccccCCCchhHHhHHHHHHHHHhCC
Q psy6736 289 ELNADLFRGTMEPVEKSLRDAKMDKAQIHDIVLVGGSTRIPKVQKLLQDFFNGKELNKSINPDEAVAYGAAVQAAILHGD 368 (1023)
Q Consensus 289 ~~~~~~~~~i~~~i~~~l~~~~~~~~~i~~V~LvGG~sr~p~v~~~l~~~f~~~~i~~~~~pd~aVa~GAa~~a~~l~~~ 368 (1023)
++++|+++++..+|+++|+++++.+.+|+.|+||||+||+|+|++.|++.|+ .++..++||++|||+|||++|+.+++.
T Consensus 298 ~l~~~l~~~~~~~i~~~l~~a~~~~~~i~~V~LvGGssriP~v~~~i~~~f~-~~~~~~~~pdeava~GAa~~aa~l~~~ 376 (595)
T TIGR02350 298 ELTADLVERTKEPVRQALKDAGLSASDIDEVILVGGSTRIPAVQELVKDFFG-KEPNKSVNPDEVVAIGAAIQGGVLKGD 376 (595)
T ss_pred HHHHHHHHHHHHHHHHHHHHcCCCHhHCcEEEEECCcccChHHHHHHHHHhC-CcccCCcCcHHHHHHHHHHHHHHhcCC
Confidence 9999999999999999999999999999999999999999999999999995 778889999999999999999999872
Q ss_pred CCcceeeeEEeeeccccceEEecCceEEEEEecCCCCCCceEEEEEeccCCCCcEEEEEeecCccccccCceeeEEEecC
Q psy6736 369 KSEEVQDLLLLDVTPLSLGIETAGGVMTALIKRNTTIPTKQTQTFTTYSDNQPGVLIQVYEGERAMTKDNNLLGKFELTS 448 (1023)
Q Consensus 369 ~~~~~~~~~~~d~~~~sigi~~~~~~~~~ii~~~t~ip~~~~~~~~~~~d~q~~~~i~i~~g~~~~~~~~~~lg~~~i~~ 448 (1023)
++++.+.|++|++||++..++.+.+|||+|+++|++++++|++..|+|+.+.+.+|||++..+.+|..||+|.+++
T Consensus 377 ----~~~~~~~d~~~~~igi~~~~~~~~~ii~~~~~iP~~~~~~~~~~~d~q~~v~i~i~~ge~~~~~~~~~lg~~~i~~ 452 (595)
T TIGR02350 377 ----VKDVLLLDVTPLSLGIETLGGVMTKLIERNTTIPTKKSQVFSTAADNQPAVDIHVLQGERPMAADNKSLGRFELTG 452 (595)
T ss_pred ----cccceeeecccceeEEEecCCceEEEEeCCCcCCccceEeeeccCCCCcEEEEEEEeecccccccCcEeEEEEECC
Confidence 6788999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCCCCeEEEEEEEcCCcceEEEEEeccCCcceeEEEecCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHH
Q psy6736 449 IPPAPRGVPQIEVTFDIDANGILNVTAIEKSTGKENKITITNDRGRLSKEDIERMVNDAEKYKAEDEKQKAVISAKNSLE 528 (1023)
Q Consensus 449 ~~~~~~g~~~i~v~f~~d~~g~l~v~~~~~~t~~~~~~~i~~~~~~ls~~~~~~~~~~~~~~~~~d~~~~~~~~a~N~lE 528 (1023)
+|+.+.|.++|+++|++|.||+|+|++.+..++++..++++.. .+||.++++++++++.++..+|+..+++.+++|+||
T Consensus 453 ~~~~~~g~~~i~v~f~~d~~G~l~v~~~~~~~~~~~~~~i~~~-~~ls~~~~~~~~~~~~~~~~~D~~~~~~~e~kn~lE 531 (595)
T TIGR02350 453 IPPAPRGVPQIEVTFDIDANGILHVSAKDKGTGKEQSITITAS-SGLSEEEIERMVKEAEANAEEDKKRKEEIEARNNAD 531 (595)
T ss_pred CCCCCCCCceEEEEEEEcCCCeEEEEEEEccCCceEEEEeccc-cccCHHHHHHHHHHHHHhhhcchhHHHHHHHHHHHH
Confidence 9999999989999999999999999999999999988888764 569999999999999999999999999999999999
Q ss_pred HHHHHHHhhhhhhhhhccCCHHHHHHHHHhhHHHHHHHhhCCccCHHHHHHHHHHHHHHHHHHHHHHH
Q psy6736 529 SYCFNMKSTVEDEKLKDKISDAERTQILDKCNDVIKWLDANQLAEKEEFEHKQKELEAICNPIITKLY 596 (1023)
Q Consensus 529 ~~iy~~~~~l~~~~~~~~~~~~e~~~l~~~l~~~~~WL~~~~~a~~~~~~~kl~~L~~~~~pi~~r~~ 596 (1023)
+|||.+|+.|++ +..++++++++++.+.++++++||+++ +..++++++++|+++++++..+++
T Consensus 532 s~iy~~r~~l~~--~~~~~~~~e~~~l~~~l~~~~~wL~~~---d~~~i~~~~~~l~~~~~~~~~~~~ 594 (595)
T TIGR02350 532 SLAYQAEKTLKE--AGDKLPAEEKEKIEKAVAELKEALKGE---DVEEIKAKTEELQQALQKLAEAMY 594 (595)
T ss_pred HHHHHHHHHHHH--hhccCCHHHHHHHHHHHHHHHHHHhcC---CHHHHHHHHHHHHHHHHHHHHHHh
Confidence 999999999974 578999999999999999999999976 567899999999999999988753
No 11
>CHL00094 dnaK heat shock protein 70
Probab=100.00 E-value=2.6e-82 Score=763.21 Aligned_cols=549 Identities=48% Similarity=0.718 Sum_probs=498.7
Q ss_pred CcccCCCCCeeEEeecccccccceeecccccccCCccccceeeEEEeccCeEEee--------cCCCceeeeeecccCCc
Q psy6736 1 MAIIHPDHPEVEITEEQSLLIQTSIMDLIGDNLGQGLIKPAFSGIRLEEGAVMLY--------CSDGYTAGWINSITGDL 72 (1023)
Q Consensus 1 vav~~~~~p~~~~~~~~~~~~~pS~~~~~~~~~g~~~~~ps~v~~~~~~~~~~~G--------~~~~~~~~~~k~~~g~~ 72 (1023)
||+|.++.|.+ |.|++|.+.+||++.+. .++.+++| .+|..++..+|+++|..
T Consensus 16 va~~~~g~~~i-i~n~~g~r~~PS~V~f~------------------~~~~~~vG~~A~~~~~~~p~~ti~~~KrliG~~ 76 (621)
T CHL00094 16 VAVMEGGKPTV-IPNAEGFRTTPSIVAYT------------------KKGDLLVGQIAKRQAVINPENTFYSVKRFIGRK 76 (621)
T ss_pred EEEEECCEEEE-EECCCCCcccceEEEEc------------------CCCCEEECHHHHHhHHhCccceehhhHHhcCCC
Confidence 46777778877 77777777777776664 22333444 35677778888888875
Q ss_pred C-----------ccc------------cccccccCHHHHHhHhhhhccCcchHHHHHHHHHhCCcCCcceEecCCCCCHH
Q psy6736 73 T-----------PWD------------GARLKAVSAQELSRGVKAIFTAPDILKKKTSEDILRKVDGQNEGLIPAYFNIS 129 (1023)
Q Consensus 73 ~-----------~~~------------~~~~~~~~~~~v~a~~L~~~~~~~~~l~~~a~~~~~~~~~~~vitVPa~~~~~ 129 (1023)
. ..+ ...+..++|+++++++| ++|++.|+.++|.++.++|||||+||++.
T Consensus 77 ~~~~~~~~~~~~~~v~~~~~g~i~~~~~~~~~~~s~eei~a~iL-------~~l~~~ae~~lg~~v~~~VItVPa~f~~~ 149 (621)
T CHL00094 77 FSEISEEAKQVSYKVKTDSNGNIKIECPALNKDFSPEEISAQVL-------RKLVEDASKYLGETVTQAVITVPAYFNDS 149 (621)
T ss_pred hHHHHhhhhcCCeEEEECCCCCEEEEEecCCeEEcHHHHHHHHH-------HHHHHHHHHHhCCCCCeEEEEECCCCCHH
Confidence 2 000 11245789999999999 99999999999999999999999999999
Q ss_pred HHHHHHHHHHHcCCceeeeecchHHHHHHhccccccCccccccCCCCCcEEEEEEeCCceEEEEEEEEeCCEEEEEEecC
Q psy6736 130 SVKSTKDSGTIAGLNVLRIINEPTAAAIAYGLDKKVGSTAVEYNGSGERNVLIFDLGGGTFDVSILTIEDGIFEVKSTAG 209 (1023)
Q Consensus 130 qr~~l~~Aa~~AGl~~~~li~Ep~AAal~y~~~~~~~~~~~~~~~~~~~~vlV~D~GggT~dvsv~~~~~~~~~v~~~~~ 209 (1023)
||+++++||++|||++++||+||+|||++|+.... .+.++|||||||||||+|++++.++.+++++++|
T Consensus 150 qR~a~~~Aa~~AGl~v~~li~EptAAAlay~~~~~-----------~~~~vlV~DlGgGT~DvSv~~~~~~~~~vla~~g 218 (621)
T CHL00094 150 QRQATKDAGKIAGLEVLRIINEPTAASLAYGLDKK-----------NNETILVFDLGGGTFDVSILEVGDGVFEVLSTSG 218 (621)
T ss_pred HHHHHHHHHHHcCCceEEEeccHHHHHHHhccccC-----------CCCEEEEEEcCCCeEEEEEEEEcCCEEEEEEEec
Confidence 99999999999999999999999999999987653 4678999999999999999999999999999999
Q ss_pred CCCccHHHHHHHHHHHHHHHHHhhhccCccccHHHHHHHHHHHHHHhHHcCCCCceEEEEecccC----CceeEEEecHH
Q psy6736 210 DTHLGGEDFDNRMVNHFVQEFKRKYKKDLTTNKRALRRLRTACERAKRTLSSSTQASIEIDSLFE----GVDFYTSITRA 285 (1023)
Q Consensus 210 ~~~lGG~~~D~~l~~~l~~~~~~~~~~~~~~~~~~~~~L~~~ae~~K~~Ls~~~~~~i~i~~~~~----~~~~~~~itr~ 285 (1023)
+.++||++||.+|++|+.++|.++++.++..+++.+.+|+.+||++|+.||.+.++.+.++.+.. +.++...|||+
T Consensus 219 d~~lGG~d~D~~l~~~~~~~~~~~~~~~~~~~~~~~~~L~~~aE~aK~~LS~~~~~~i~i~~~~~~~~g~~~~~~~itR~ 298 (621)
T CHL00094 219 DTHLGGDDFDKKIVNWLIKEFKKKEGIDLSKDRQALQRLTEAAEKAKIELSNLTQTEINLPFITATQTGPKHIEKTLTRA 298 (621)
T ss_pred CCCcChHHHHHHHHHHHHHHHHHHhCCCcccCHHHHHHHHHHHHHHHHhcCCCCceEEEEeecccCCCCCeeEEEEEcHH
Confidence 99999999999999999999999999888889999999999999999999999989898887643 24788899999
Q ss_pred HHHHHhHHHHHHHHHHHHHHHHHcCCCccCcCeEEEEcCCCCcHHHHHHHHHHcCCccccccCCCchhHHhHHHHHHHHH
Q psy6736 286 RFEELNADLFRGTMEPVEKSLRDAKMDKAQIHDIVLVGGSTRIPKVQKLLQDFFNGKELNKSINPDEAVAYGAAVQAAIL 365 (1023)
Q Consensus 286 ~~e~~~~~~~~~i~~~i~~~l~~~~~~~~~i~~V~LvGG~sr~p~v~~~l~~~f~~~~i~~~~~pd~aVa~GAa~~a~~l 365 (1023)
+|+++++++++++..+|+++|+++++.+.+|+.|+||||+||+|.|++.|+++| +.++...+||++|||+|||++|+.+
T Consensus 299 ~fe~l~~~l~~~~~~~i~~~L~~a~~~~~~i~~ViLvGGssriP~v~~~l~~~f-g~~~~~~~~pdeava~GAA~~aa~l 377 (621)
T CHL00094 299 KFEELCSDLINRCRIPVENALKDAKLDKSDIDEVVLVGGSTRIPAIQELVKKLL-GKKPNQSVNPDEVVAIGAAVQAGVL 377 (621)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHcCCChhhCcEEEEECCccCChHHHHHHHHHh-CCCcCcCCCchhHHHhhhHHHHHHh
Confidence 999999999999999999999999999999999999999999999999999999 5678889999999999999999999
Q ss_pred hCCCCcceeeeEEeeeccccceEEecCceEEEEEecCCCCCCceEEEEEeccCCCCcEEEEEeecCccccccCceeeEEE
Q psy6736 366 HGDKSEEVQDLLLLDVTPLSLGIETAGGVMTALIKRNTTIPTKQTQTFTTYSDNQPGVLIQVYEGERAMTKDNNLLGKFE 445 (1023)
Q Consensus 366 ~~~~~~~~~~~~~~d~~~~sigi~~~~~~~~~ii~~~t~ip~~~~~~~~~~~d~q~~~~i~i~~g~~~~~~~~~~lg~~~ 445 (1023)
++ ..+++.+.|++|++||++..++.+.+|||+|+++|++++.+|++..++|+.+.+.+|||++..+.+|..||+|.
T Consensus 378 s~----~~~~~~~~d~~~~~lgi~~~~~~~~~ii~~~t~iP~~~~~~~~~~~~~q~~v~i~i~~ge~~~~~~n~~lg~~~ 453 (621)
T CHL00094 378 AG----EVKDILLLDVTPLSLGVETLGGVMTKIIPRNTTIPTKKSEVFSTAVDNQTNVEIHVLQGERELAKDNKSLGTFR 453 (621)
T ss_pred cC----CccceeeeeeeceeeeeeccCCEEEEEEeCCCccceeeeEEEEeccCCCcEEEEEEEeeccccCCCCCEEEEEE
Confidence 86 35788999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ecCCCCCCCCCCeEEEEEEEcCCcceEEEEEeccCCcceeEEEecCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy6736 446 LTSIPPAPRGVPQIEVTFDIDANGILNVTAIEKSTGKENKITITNDRGRLSKEDIERMVNDAEKYKAEDEKQKAVISAKN 525 (1023)
Q Consensus 446 i~~~~~~~~g~~~i~v~f~~d~~g~l~v~~~~~~t~~~~~~~i~~~~~~ls~~~~~~~~~~~~~~~~~d~~~~~~~~a~N 525 (1023)
+.++|+.+.|.+.|+|+|++|.||+|+|++.+..+++...+++.+ ..+|+.++++++++++.++..+|+..+++.+++|
T Consensus 454 i~~~~~~~~g~~~i~v~f~id~~Gil~v~~~~~~t~~~~~~~i~~-~~~ls~~~i~~~~~~~~~~~~~d~~~~~~~~~kn 532 (621)
T CHL00094 454 LDGIPPAPRGVPQIEVTFDIDANGILSVTAKDKGTGKEQSITIQG-ASTLPKDEVERMVKEAEKNAAEDKEKREKIDLKN 532 (621)
T ss_pred EeCCCCCCCCCCcEEEEEEECCCCeEEEEEeeccCCceeeeeecc-chhccHHHHHHHHHHHHHhhhcchhHHHHHHHHH
Confidence 999999999998999999999999999999999999988888874 3579999999999999999999999999999999
Q ss_pred hHHHHHHHHHhhhhhhhhhccCCHHHHHHHHHhhHHHHHHHhhCCccCHHHHHHHHHHHHHHHHHHHHHHHc
Q psy6736 526 SLESYCFNMKSTVEDEKLKDKISDAERTQILDKCNDVIKWLDANQLAEKEEFEHKQKELEAICNPIITKLYQ 597 (1023)
Q Consensus 526 ~lE~~iy~~~~~l~~~~~~~~~~~~e~~~l~~~l~~~~~WL~~~~~a~~~~~~~kl~~L~~~~~pi~~r~~e 597 (1023)
+||+|+|.+|+.|++ +..++++++++++.+.++++++||+++ ..+++++++++|++.++++..+++.
T Consensus 533 ~le~~i~~~~~~l~~--~~~~~~~~~~~~~~~~l~~~~~wl~~~---~~~~~~~~~~~l~~~~~~~~~kl~~ 599 (621)
T CHL00094 533 QAESLCYQAEKQLKE--LKDKISEEKKEKIENLIKKLRQALQND---NYESIKSLLEELQKALMEIGKEVYS 599 (621)
T ss_pred HhHHHHHHHHHHHHH--HhccCCHHHHHHHHHHHHHHHHHHhcC---CHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 999999999999974 788999999999999999999999976 4578999999999999999998766
No 12
>TIGR01991 HscA Fe-S protein assembly chaperone HscA. The Heat Shock Cognate proteins HscA and HscB act together as chaperones. HscA resembles DnaK but belongs in a separate clade. The apparent function is to aid assembly of iron-sulfur cluster proteins. Homologs from Buchnera and Wolbachia are clearly in the same clade but are highly derived and score lower than some examples of DnaK.
Probab=100.00 E-value=1.6e-81 Score=751.04 Aligned_cols=545 Identities=37% Similarity=0.560 Sum_probs=488.1
Q ss_pred CcccCCCCCeeEEeecccccccceeecccccccCCccccceeeEEEeccCeEEee--------cCCCceeeeeecccCCc
Q psy6736 1 MAIIHPDHPEVEITEEQSLLIQTSIMDLIGDNLGQGLIKPAFSGIRLEEGAVMLY--------CSDGYTAGWINSITGDL 72 (1023)
Q Consensus 1 vav~~~~~p~~~~~~~~~~~~~pS~~~~~~~~~g~~~~~ps~v~~~~~~~~~~~G--------~~~~~~~~~~k~~~g~~ 72 (1023)
||+|.++.|.+ |.|.+|.+.+||++.+.+ ++.+.+| .+|..++..||+++|..
T Consensus 13 va~~~~g~~~i-i~n~~g~~~~PS~V~f~~------------------~~~~~vG~~A~~~~~~~p~~ti~~~Kr~iG~~ 73 (599)
T TIGR01991 13 VASVRSGVPEV-LPDAEGRVLLPSVVRYLK------------------DGGVEVGKEALAAAAEDPKNTISSVKRLMGRS 73 (599)
T ss_pred EEEEECCEEEE-EECCCCCcccCeEEEEeC------------------CCCEEecHHHHHhhhhChhhhHHHHHHHhCCC
Confidence 46777777777 777777666666666542 2334445 35677777888888864
Q ss_pred Cc--------------------cccccccccCHHHHHhHhhhhccCcchHHHHHHHHHhCCcCCcceEecCCCCCHHHHH
Q psy6736 73 TP--------------------WDGARLKAVSAQELSRGVKAIFTAPDILKKKTSEDILRKVDGQNEGLIPAYFNISSVK 132 (1023)
Q Consensus 73 ~~--------------------~~~~~~~~~~~~~v~a~~L~~~~~~~~~l~~~a~~~~~~~~~~~vitVPa~~~~~qr~ 132 (1023)
.- .+....+.++|+++++++| ++|++.|+.++|.++.++|||||+||++.||+
T Consensus 74 ~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~ei~a~iL-------~~lk~~a~~~lg~~v~~~VItVPa~f~~~qR~ 146 (599)
T TIGR01991 74 IEDIKTFSILPYRFVDGPGEMVRLRTVQGTVTPVEVSAEIL-------KKLKQRAEESLGGDLVGAVITVPAYFDDAQRQ 146 (599)
T ss_pred ccchhhcccCCEEEEEcCCCceEEEeCCCEEcHHHHHHHHH-------HHHHHHHHHHhCCCcceEEEEECCCCCHHHHH
Confidence 20 0111234789999999999 99999999999999999999999999999999
Q ss_pred HHHHHHHHcCCceeeeecchHHHHHHhccccccCccccccCCCCCcEEEEEEeCCceEEEEEEEEeCCEEEEEEecCCCC
Q psy6736 133 STKDSGTIAGLNVLRIINEPTAAAIAYGLDKKVGSTAVEYNGSGERNVLIFDLGGGTFDVSILTIEDGIFEVKSTAGDTH 212 (1023)
Q Consensus 133 ~l~~Aa~~AGl~~~~li~Ep~AAal~y~~~~~~~~~~~~~~~~~~~~vlV~D~GggT~dvsv~~~~~~~~~v~~~~~~~~ 212 (1023)
++++||++||+++++|++||+|||++|+.... .+.++||||+||||||+|++++.++.++++++.|+.+
T Consensus 147 a~~~Aa~~AGl~v~~li~EPtAAAlay~~~~~-----------~~~~vlV~DlGgGT~DvSi~~~~~~~~~vla~~gd~~ 215 (599)
T TIGR01991 147 ATKDAARLAGLNVLRLLNEPTAAAVAYGLDKA-----------SEGIYAVYDLGGGTFDVSILKLTKGVFEVLATGGDSA 215 (599)
T ss_pred HHHHHHHHcCCCceEEecCHHHHHHHHhhccC-----------CCCEEEEEEcCCCeEEEEEEEEcCCeEEEEEEcCCCC
Confidence 99999999999999999999999999987653 5678999999999999999999999999999999999
Q ss_pred ccHHHHHHHHHHHHHHHHHhhhccCccccHHHHHHHHHHHHHHhHHcCCCCceEEEEecccCCceeEEEecHHHHHHHhH
Q psy6736 213 LGGEDFDNRMVNHFVQEFKRKYKKDLTTNKRALRRLRTACERAKRTLSSSTQASIEIDSLFEGVDFYTSITRARFEELNA 292 (1023)
Q Consensus 213 lGG~~~D~~l~~~l~~~~~~~~~~~~~~~~~~~~~L~~~ae~~K~~Ls~~~~~~i~i~~~~~~~~~~~~itr~~~e~~~~ 292 (1023)
+||.+||++|++|+.+++ +.+...+++.+.+|+.+||++|+.||.+..+.+.++. +|.++.++|||++|+++++
T Consensus 216 lGG~d~D~~l~~~l~~~~----~~~~~~~~~~~~~L~~~ae~aK~~LS~~~~~~i~i~~--~g~~~~~~itr~efe~l~~ 289 (599)
T TIGR01991 216 LGGDDFDHALAKWILKQL----GISADLNPEDQRLLLQAARAAKEALTDAESVEVDFTL--DGKDFKGKLTRDEFEALIQ 289 (599)
T ss_pred CCHHHHHHHHHHHHHHhh----CCCCCCCHHHHHHHHHHHHHHHHhCCCCceEEEEEEE--CCcEEEEEEeHHHHHHHHH
Confidence 999999999999999765 3444567889999999999999999999988888874 6889999999999999999
Q ss_pred HHHHHHHHHHHHHHHHcCCCccCcCeEEEEcCCCCcHHHHHHHHHHcCCccccccCCCchhHHhHHHHHHHHHhCCCCcc
Q psy6736 293 DLFRGTMEPVEKSLRDAKMDKAQIHDIVLVGGSTRIPKVQKLLQDFFNGKELNKSINPDEAVAYGAAVQAAILHGDKSEE 372 (1023)
Q Consensus 293 ~~~~~i~~~i~~~l~~~~~~~~~i~~V~LvGG~sr~p~v~~~l~~~f~~~~i~~~~~pd~aVa~GAa~~a~~l~~~~~~~ 372 (1023)
|+++++..+|.++|+++++.+.+|+.|+||||+||+|+|++.|++.| +..+..++|||+|||+|||++|+.+++ .+.
T Consensus 290 ~ll~~i~~~i~~~L~~a~~~~~~id~ViLvGGssriP~V~~~l~~~f-~~~~~~~~npdeaVA~GAai~a~~l~~--~~~ 366 (599)
T TIGR01991 290 PLVQKTLSICRRALRDAGLSVEEIKGVVLVGGSTRMPLVRRAVAELF-GQEPLTDIDPDQVVALGAAIQADLLAG--NRI 366 (599)
T ss_pred HHHHHHHHHHHHHHHHcCCChhhCCEEEEECCcCCChHHHHHHHHHh-CCCCCCCCCCcHHHHHHHHHHHHHhcc--ccc
Confidence 99999999999999999999999999999999999999999999999 556677899999999999999999987 345
Q ss_pred eeeeEEeeeccccceEEecCceEEEEEecCCCCCCceEEEEEeccCCCCcEEEEEeecCccccccCceeeEEEecCCCCC
Q psy6736 373 VQDLLLLDVTPLSLGIETAGGVMTALIKRNTTIPTKQTQTFTTYSDNQPGVLIQVYEGERAMTKDNNLLGKFELTSIPPA 452 (1023)
Q Consensus 373 ~~~~~~~d~~~~sigi~~~~~~~~~ii~~~t~ip~~~~~~~~~~~d~q~~~~i~i~~g~~~~~~~~~~lg~~~i~~~~~~ 452 (1023)
.+++.+.|++|++||+++.+|.+.++||||+++|++++..|++..|+|+.+.|.||||++..+.+|..||+|.|.++|+.
T Consensus 367 ~~~~~l~dv~p~slgi~~~~g~~~~ii~rnt~iP~~~~~~~~t~~d~q~~v~i~i~qGe~~~~~~n~~lg~~~l~~i~~~ 446 (599)
T TIGR01991 367 GNDLLLLDVTPLSLGIETMGGLVEKIIPRNTPIPVARAQEFTTYKDGQTAMVIHVVQGERELVEDCRSLARFELRGIPPM 446 (599)
T ss_pred cCceEEEEeeeeeeEEEecCCEEEEEEeCCCcCCccceEEEEEccCCCeEEEEEEEeecccccccCceEEEEEEcCCCCC
Confidence 56899999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCeEEEEEEEcCCcceEEEEEeccCCcceeEEEecCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHH
Q psy6736 453 PRGVPQIEVTFDIDANGILNVTAIEKSTGKENKITITNDRGRLSKEDIERMVNDAEKYKAEDEKQKAVISAKNSLESYCF 532 (1023)
Q Consensus 453 ~~g~~~i~v~f~~d~~g~l~v~~~~~~t~~~~~~~i~~~~~~ls~~~~~~~~~~~~~~~~~d~~~~~~~~a~N~lE~~iy 532 (1023)
+.|.+.|+|+|++|.||+|+|++.+..||++..+.+.+. ..|++++++++.++..++..+|+..++..+++|++|+|+|
T Consensus 447 ~~g~~~i~v~f~id~~gil~V~a~~~~t~~~~~~~i~~~-~~l~~~~i~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~ 525 (599)
T TIGR01991 447 VAGAARIRVTFQVDADGLLTVSAQEQSTGVEQSIQVKPS-YGLSDEEIERMLKDSFKHAEEDMYARALAEQKVEAERILE 525 (599)
T ss_pred CCCCCcEEEEEEECCCCeEEEEEEECCCCcEEEEecccc-cCCCHHHHHHHHHHHHhhhhhhHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999999998888764 5699999999999999999999999999999999999999
Q ss_pred HHHhhhhhhhhhccCCHHHHHHHHHhhHHHHHHHhhCCccCHHHHHHHHHHHHHHHHHHHHHHHc
Q psy6736 533 NMKSTVEDEKLKDKISDAERTQILDKCNDVIKWLDANQLAEKEEFEHKQKELEAICNPIITKLYQ 597 (1023)
Q Consensus 533 ~~~~~l~~~~~~~~~~~~e~~~l~~~l~~~~~WL~~~~~a~~~~~~~kl~~L~~~~~pi~~r~~e 597 (1023)
.++..+.+ +...+++++++++.+.++++++||+++ +.+.++++.++|++.+.++..+...
T Consensus 526 ~~~~~~~~--~~~~~~~~~~~~~~~~l~~~~~~l~~~---~~~~~~~~~~~l~~~~~~~~~~~~~ 585 (599)
T TIGR01991 526 ALQAALAA--DGDLLSEDERAAIDAAMEALQKALQGD---DADAIKAAIEALEEATDNFAARRMD 585 (599)
T ss_pred HHHHHHHH--hhccCCHHHHHHHHHHHHHHHHHHhcC---CHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 99998864 446889999999999999999999876 5678899999999999999875554
No 13
>PRK05183 hscA chaperone protein HscA; Provisional
Probab=100.00 E-value=3.8e-80 Score=740.38 Aligned_cols=541 Identities=35% Similarity=0.552 Sum_probs=477.9
Q ss_pred CcccCCCCCeeEEeecccccccceeecccccccCCccccceeeEEEeccCeEEee--------cCCCceeeeeecccCCc
Q psy6736 1 MAIIHPDHPEVEITEEQSLLIQTSIMDLIGDNLGQGLIKPAFSGIRLEEGAVMLY--------CSDGYTAGWINSITGDL 72 (1023)
Q Consensus 1 vav~~~~~p~~~~~~~~~~~~~pS~~~~~~~~~g~~~~~ps~v~~~~~~~~~~~G--------~~~~~~~~~~k~~~g~~ 72 (1023)
||+|.++.|.+ |.|.+|.+.+||++.+. .++ +.+| ..|..++..+|+++|..
T Consensus 33 va~~~~g~~~i-i~n~~g~~~~PS~V~f~------------------~~~-~~vG~~A~~~~~~~p~~ti~~~KrliG~~ 92 (616)
T PRK05183 33 VATVRSGQAEV-LPDEQGRVLLPSVVRYL------------------EDG-IEVGYEARANAAQDPKNTISSVKRFMGRS 92 (616)
T ss_pred EEEEECCEEEE-EEcCCCCeecCeEEEEc------------------CCC-EEEcHHHHHhhHhCchhhHHHHHHHhCCC
Confidence 35556666655 56655555555555544 222 4455 45677777888888864
Q ss_pred Cc---------------------cccccccccCHHHHHhHhhhhccCcchHHHHHHHHHhCCcCCcceEecCCCCCHHHH
Q psy6736 73 TP---------------------WDGARLKAVSAQELSRGVKAIFTAPDILKKKTSEDILRKVDGQNEGLIPAYFNISSV 131 (1023)
Q Consensus 73 ~~---------------------~~~~~~~~~~~~~v~a~~L~~~~~~~~~l~~~a~~~~~~~~~~~vitVPa~~~~~qr 131 (1023)
.. .+....+.++|+++++++| ++|++.|+.++|.++.++|||||+||++.||
T Consensus 93 ~~d~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~p~ei~a~iL-------~~lk~~ae~~lg~~v~~~VITVPa~f~~~qR 165 (616)
T PRK05183 93 LADIQQRYPHLPYQFVASENGMPLIRTAQGLKSPVEVSAEIL-------KALRQRAEETLGGELDGAVITVPAYFDDAQR 165 (616)
T ss_pred chhhhhhhhcCCeEEEecCCCceEEEecCCeEcHHHHHHHHH-------HHHHHHHHHHhCCCcceEEEEECCCCCHHHH
Confidence 20 0001124789999999999 9999999999999999999999999999999
Q ss_pred HHHHHHHHHcCCceeeeecchHHHHHHhccccccCccccccCCCCCcEEEEEEeCCceEEEEEEEEeCCEEEEEEecCCC
Q psy6736 132 KSTKDSGTIAGLNVLRIINEPTAAAIAYGLDKKVGSTAVEYNGSGERNVLIFDLGGGTFDVSILTIEDGIFEVKSTAGDT 211 (1023)
Q Consensus 132 ~~l~~Aa~~AGl~~~~li~Ep~AAal~y~~~~~~~~~~~~~~~~~~~~vlV~D~GggT~dvsv~~~~~~~~~v~~~~~~~ 211 (1023)
+++++||++||+++++||+||+|||++|+.... .+.+++|||+||||||+|++++.++.++++++.||.
T Consensus 166 ~a~~~Aa~~AGl~v~~li~EPtAAAlay~~~~~-----------~~~~vlV~DlGGGT~DvSv~~~~~~~~evlat~gd~ 234 (616)
T PRK05183 166 QATKDAARLAGLNVLRLLNEPTAAAIAYGLDSG-----------QEGVIAVYDLGGGTFDISILRLSKGVFEVLATGGDS 234 (616)
T ss_pred HHHHHHHHHcCCCeEEEecchHHHHHHhhcccC-----------CCCEEEEEECCCCeEEEEEEEeeCCEEEEEEecCCC
Confidence 999999999999999999999999999987653 467899999999999999999999999999999999
Q ss_pred CccHHHHHHHHHHHHHHHHHhhhccCccccHHHHHHHHHHHHHHhHHcCCCCceEEEEecccCCceeEEEecHHHHHHHh
Q psy6736 212 HLGGEDFDNRMVNHFVQEFKRKYKKDLTTNKRALRRLRTACERAKRTLSSSTQASIEIDSLFEGVDFYTSITRARFEELN 291 (1023)
Q Consensus 212 ~lGG~~~D~~l~~~l~~~~~~~~~~~~~~~~~~~~~L~~~ae~~K~~Ls~~~~~~i~i~~~~~~~~~~~~itr~~~e~~~ 291 (1023)
++||.+||.+|++|+.++|+ .+...+++.+.+|+.+||++|+.||.+..+.+.+... ...|||++|++++
T Consensus 235 ~lGG~d~D~~l~~~~~~~~~----~~~~~~~~~~~~L~~~ae~aK~~LS~~~~~~i~i~~~------~~~itr~efe~l~ 304 (616)
T PRK05183 235 ALGGDDFDHLLADWILEQAG----LSPRLDPEDQRLLLDAARAAKEALSDADSVEVSVALW------QGEITREQFNALI 304 (616)
T ss_pred CcCHHHHHHHHHHHHHHHcC----CCcCCCHHHHHHHHHHHHHHHHhcCCCceEEEEEecC------CCeEcHHHHHHHH
Confidence 99999999999999998775 3344678889999999999999999999888887532 2349999999999
Q ss_pred HHHHHHHHHHHHHHHHHcCCCccCcCeEEEEcCCCCcHHHHHHHHHHcCCccccccCCCchhHHhHHHHHHHHHhCCCCc
Q psy6736 292 ADLFRGTMEPVEKSLRDAKMDKAQIHDIVLVGGSTRIPKVQKLLQDFFNGKELNKSINPDEAVAYGAAVQAAILHGDKSE 371 (1023)
Q Consensus 292 ~~~~~~i~~~i~~~l~~~~~~~~~i~~V~LvGG~sr~p~v~~~l~~~f~~~~i~~~~~pd~aVa~GAa~~a~~l~~~~~~ 371 (1023)
+|+++++..+++++|+++++.+.+|+.|+||||+||+|+|++.|+++| +..+..++|||+|||+|||++|+.+++ .+
T Consensus 305 ~~l~~~~~~~i~~~L~~a~~~~~~i~~ViLvGGssriP~v~~~l~~~f-g~~~~~~~npdeaVA~GAAi~a~~l~~--~~ 381 (616)
T PRK05183 305 APLVKRTLLACRRALRDAGVEADEVKEVVMVGGSTRVPLVREAVGEFF-GRTPLTSIDPDKVVAIGAAIQADILAG--NK 381 (616)
T ss_pred HHHHHHHHHHHHHHHHHcCCCcccCCEEEEECCcccChHHHHHHHHHh-ccCcCcCCCchHHHHHHHHHHHHHhcc--cc
Confidence 999999999999999999999999999999999999999999999999 455667899999999999999999987 33
Q ss_pred ceeeeEEeeeccccceEEecCceEEEEEecCCCCCCceEEEEEeccCCCCcEEEEEeecCccccccCceeeEEEecCCCC
Q psy6736 372 EVQDLLLLDVTPLSLGIETAGGVMTALIKRNTTIPTKQTQTFTTYSDNQPGVLIQVYEGERAMTKDNNLLGKFELTSIPP 451 (1023)
Q Consensus 372 ~~~~~~~~d~~~~sigi~~~~~~~~~ii~~~t~ip~~~~~~~~~~~d~q~~~~i~i~~g~~~~~~~~~~lg~~~i~~~~~ 451 (1023)
..+++.+.|++|++||+++.+|.+.+|||||+++|++++..|++..|+|+.+.++||||++..+.+|..||+|.|.++|+
T Consensus 382 ~~~~~~l~dv~p~slgi~~~~g~~~~ii~r~t~iP~~~~~~~~t~~d~q~~v~i~v~qGe~~~~~~n~~lg~~~i~~i~~ 461 (616)
T PRK05183 382 PDSDMLLLDVIPLSLGLETMGGLVEKIIPRNTTIPVARAQEFTTFKDGQTAMAIHVVQGERELVADCRSLARFELRGIPP 461 (616)
T ss_pred ccCceEEEeeccccccceecCCeEEEEEeCCCcccccccEEEEeccCCCeEEEEEEecccccccccccEEEEEEeCCCCC
Confidence 45689999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCeEEEEEEEcCCcceEEEEEeccCCcceeEEEecCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHH
Q psy6736 452 APRGVPQIEVTFDIDANGILNVTAIEKSTGKENKITITNDRGRLSKEDIERMVNDAEKYKAEDEKQKAVISAKNSLESYC 531 (1023)
Q Consensus 452 ~~~g~~~i~v~f~~d~~g~l~v~~~~~~t~~~~~~~i~~~~~~ls~~~~~~~~~~~~~~~~~d~~~~~~~~a~N~lE~~i 531 (1023)
.+.|.++|+|+|++|.||+|+|++.+..+|++..+++.+. ..|+++++++++++..++..+|+..+++.+++|++|+|+
T Consensus 462 ~~~g~~~i~v~f~~d~~Gil~V~a~~~~~~~~~~~~i~~~-~~ls~~~i~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~i 540 (616)
T PRK05183 462 MAAGAARIRVTFQVDADGLLSVTAMEKSTGVEASIQVKPS-YGLTDDEIARMLKDSMSHAEEDMQARALAEQKVEAERVL 540 (616)
T ss_pred CCCCCccEEEEEEECCCCeEEEEEEEcCCCcEEEeccccc-ccCCHHHHHHHHHHHHhhhhhhhhHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999988755 469999999999999999999999999999999999999
Q ss_pred HHHHhhhhhhhhhccCCHHHHHHHHHhhHHHHHHHhhCCccCHHHHHHHHHHHHHHHHHHHHHHHcc
Q psy6736 532 FNMKSTVEDEKLKDKISDAERTQILDKCNDVIKWLDANQLAEKEEFEHKQKELEAICNPIITKLYQG 598 (1023)
Q Consensus 532 y~~~~~l~~~~~~~~~~~~e~~~l~~~l~~~~~WL~~~~~a~~~~~~~kl~~L~~~~~pi~~r~~e~ 598 (1023)
|.++..+.+ ....+++++++++.+.++++++||..+ +.+.+++++++|++.+.++..+..+.
T Consensus 541 ~~~~~~~~~--~~~~~~~~~~~~~~~~l~~~~~~l~~~---d~~~~~~~~~~l~~~~~~~~~~~~~~ 602 (616)
T PRK05183 541 EALQAALAA--DGDLLSAAERAAIDAAMAALREVAQGD---DADAIEAAIKALDKATQEFAARRMDR 602 (616)
T ss_pred HHHHHHHHH--hhccCCHHHHHHHHHHHHHHHHHHhcC---CHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 999999964 336789999999999999999999865 66899999999999999999865543
No 14
>KOG0102|consensus
Probab=100.00 E-value=3.3e-81 Score=675.17 Aligned_cols=570 Identities=45% Similarity=0.684 Sum_probs=510.1
Q ss_pred CcccCCCCCeeEEeecccccccceeecccccc---cCCccccceeeEEE---eccCeEEee----------cCCCceeee
Q psy6736 1 MAIIHPDHPEVEITEEQSLLIQTSIMDLIGDN---LGQGLIKPAFSGIR---LEEGAVMLY----------CSDGYTAGW 64 (1023)
Q Consensus 1 vav~~~~~p~~~~~~~~~~~~~pS~~~~~~~~---~g~~~~~ps~v~~~---~~~~~~~~G----------~~~~~~~~~ 64 (1023)
||+|+|..|.+ +.|..|.|.|||.+++.-|. .|...++-++.+=. +.++ .++| ......++.
T Consensus 41 va~meg~~~ki-ienaegqrtTpsvva~~kdge~Lvg~~akrqav~n~~ntffatK-rligRrf~d~evq~~~k~vpyKi 118 (640)
T KOG0102|consen 41 VAVMEGKKPKI-IENAEGQRTTPSVVAFTKDGERLVGMPAKRQAVTNPENTFFATK-RLIGRRFDDPEVQKDIKQVPYKI 118 (640)
T ss_pred EEEEeCCCceE-eecccccccCCceEEEeccccEEecchhhhhhccCCCceEEEeh-hhhhhhccCHHHHHHHHhCCcce
Confidence 68999999998 99999999999999887332 12222222222100 0011 1223 123445666
Q ss_pred eecccCCcCccccccccccCHHHHHhHhhhhccCcchHHHHHHHHHhCCcCCcceEecCCCCCHHHHHHHHHHHHHcCCc
Q psy6736 65 INSITGDLTPWDGARLKAVSAQELSRGVKAIFTAPDILKKKTSEDILRKVDGQNEGLIPAYFNISSVKSTKDSGTIAGLN 144 (1023)
Q Consensus 65 ~k~~~g~~~~~~~~~~~~~~~~~v~a~~L~~~~~~~~~l~~~a~~~~~~~~~~~vitVPa~~~~~qr~~l~~Aa~~AGl~ 144 (1023)
+|...|+..+.. ++..++|.++.+++| .+++++|+.+++.++..+|+||||||++.||+++++|.++||++
T Consensus 119 Vk~~ngdaw~e~--~G~~~spsqig~~vl-------~kmk~tae~yl~~~v~~avvtvpAyfndsqRqaTkdag~iagl~ 189 (640)
T KOG0102|consen 119 VKASNGDAWVEA--RGKQYSPSQIGAFVL-------MKMKETAEAYLGKKVKNAVITVPAYFNDSQRQATKDAGQIAGLN 189 (640)
T ss_pred EEccCCcEEEEe--CCeEecHHHHHHHHH-------HHHHHHHHHHcCchhhheeeccHHHHhHHHHHHhHhhhhhccce
Confidence 665555544444 778999999999999 99999999999999999999999999999999999999999999
Q ss_pred eeeeecchHHHHHHhccccccCccccccCCCCCcEEEEEEeCCceEEEEEEEEeCCEEEEEEecCCCCccHHHHHHHHHH
Q psy6736 145 VLRIINEPTAAAIAYGLDKKVGSTAVEYNGSGERNVLIFDLGGGTFDVSILTIEDGIFEVKSTAGDTHLGGEDFDNRMVN 224 (1023)
Q Consensus 145 ~~~li~Ep~AAal~y~~~~~~~~~~~~~~~~~~~~vlV~D~GggT~dvsv~~~~~~~~~v~~~~~~~~lGG~~~D~~l~~ 224 (1023)
+++++|||+|||++|+++.. .+..++|||+||||||+|++.+.++++++.++.||.++||++||..+..
T Consensus 190 vlrvineptaaalaygld~k-----------~~g~iaV~dLgggtfdisilei~~gvfevksTngdtflggedfd~~~~~ 258 (640)
T KOG0102|consen 190 VLRVINEPTAAALAYGLDKK-----------EDGVIAVFDLGGGTFDISILEIEDGVFEVKSTNGDTHLGGEDFDNALVR 258 (640)
T ss_pred eeccCCccchhHHhhccccc-----------CCCceEEEEcCCceeeeeeehhccceeEEEeccCccccChhHHHHHHHH
Confidence 99999999999999999876 4678999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhhhccCccccHHHHHHHHHHHHHHhHHcCCCCceEEEEecccCC----ceeEEEecHHHHHHHhHHHHHHHHH
Q psy6736 225 HFVQEFKRKYKKDLTTNKRALRRLRTACERAKRTLSSSTQASIEIDSLFEG----VDFYTSITRARFEELNADLFRGTME 300 (1023)
Q Consensus 225 ~l~~~~~~~~~~~~~~~~~~~~~L~~~ae~~K~~Ls~~~~~~i~i~~~~~~----~~~~~~itr~~~e~~~~~~~~~i~~ 300 (1023)
|+...|.+..+.++..+.++++||+.++|++|++||...++.+.++++..+ ..+++++||.+|++++.+++++.++
T Consensus 259 ~~v~~fk~~~gidl~kd~~a~qrl~eaaEkaKielSs~~~tei~lp~iTada~gpkh~~i~~tr~efe~~v~~lI~Rti~ 338 (640)
T KOG0102|consen 259 FIVSEFKKEEGIDLTKDRMALQRLREAAEKAKIELSSRQQTEINLPFITADASGPKHLNIELTRGEFEELVPSLIARTIE 338 (640)
T ss_pred HHHHhhhcccCcchhhhHHHHHHHHHHHHhhhhhhhhcccceeccceeeccCCCCeeEEEeecHHHHHHhhHHHHHhhhh
Confidence 999999999999999999999999999999999999999999999887654 5789999999999999999999999
Q ss_pred HHHHHHHHcCCCccCcCeEEEEcCCCCcHHHHHHHHHHcCCccccccCCCchhHHhHHHHHHHHHhCCCCcceeeeEEee
Q psy6736 301 PVEKSLRDAKMDKAQIHDIVLVGGSTRIPKVQKLLQDFFNGKELNKSINPDEAVAYGAAVQAAILHGDKSEEVQDLLLLD 380 (1023)
Q Consensus 301 ~i~~~l~~~~~~~~~i~~V~LvGG~sr~p~v~~~l~~~f~~~~i~~~~~pd~aVa~GAa~~a~~l~~~~~~~~~~~~~~d 380 (1023)
++.++|++|++..+||+.|+||||.+|+|.+++.+++.| +......+|||++||.|||++++.+++ .++++.+.|
T Consensus 339 p~~~aL~dA~~~~~di~EV~lvggmtrmpkv~s~V~e~f-gk~p~~~vnPdeava~GAaiqggvl~g----eVkdvlLLd 413 (640)
T KOG0102|consen 339 PCKKALRDASLSSSDINEVILVGGMTRMPKVQSTVKELF-GKGPSKGVNPDEAVAGGAAIQGGVLSG----EVKDVLLLD 413 (640)
T ss_pred HHHHHHHhccCChhhhhhhhhhcchhhcHHHHHHHHHHh-CCCCCCCcCCcchhccchhhccchhhc----cccceeeee
Confidence 999999999999999999999999999999999999999 677888999999999999999999987 589999999
Q ss_pred eccccceEEecCceEEEEEecCCCCCCceEEEEEeccCCCCcEEEEEeecCccccccCceeeEEEecCCCCCCCCCCeEE
Q psy6736 381 VTPLSLGIETAGGVMTALIKRNTTIPTKQTQTFTTYSDNQPGVLIQVYEGERAMTKDNNLLGKFELTSIPPAPRGVPQIE 460 (1023)
Q Consensus 381 ~~~~sigi~~~~~~~~~ii~~~t~ip~~~~~~~~~~~d~q~~~~i~i~~g~~~~~~~~~~lg~~~i~~~~~~~~g~~~i~ 460 (1023)
++|+++|+++.+|.|..+||||+.||++++..|.+..|+|+.+.|.++||++....+|..+|+|.+.++|+.|+|.+.|+
T Consensus 414 VtpLsLgietlggvft~Li~rnttIptkksqvfstaadgqt~V~ikv~qgere~~~dnk~lG~f~l~gipp~pRgvpqie 493 (640)
T KOG0102|consen 414 VTPLSLGIETLGGVFTKLIPRNTTIPTKKSQVFSTAADGQTQVEIKVFQGEREMVNDNKLLGSFILQGIPPAPRGVPQIE 493 (640)
T ss_pred cchHHHHHHhhhhhheecccCCcccCchhhhheeecccCCceEEEEeeechhhhhccCcccceeeecccCCCCCCCCcee
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEEEEcCCcceEEEEEeccCCcceeEEEecCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHhhhhh
Q psy6736 461 VTFDIDANGILNVTAIEKSTGKENKITITNDRGRLSKEDIERMVNDAEKYKAEDEKQKAVISAKNSLESYCFNMKSTVED 540 (1023)
Q Consensus 461 v~f~~d~~g~l~v~~~~~~t~~~~~~~i~~~~~~ls~~~~~~~~~~~~~~~~~d~~~~~~~~a~N~lE~~iy~~~~~l~~ 540 (1023)
|+|.+|.||+++|+|.++.|+|.+++++....+ ||+++++.+....+++...|+.++++.+..|..|+++|.....+..
T Consensus 494 VtfDIdanGI~~vsA~dk~t~K~qsi~i~~sgg-Ls~~ei~~mV~eaer~~~~d~~~~~~ie~~nka~s~~~~te~~~~~ 572 (640)
T KOG0102|consen 494 VTFDIDANGIGTVSAKDKGTGKSQSITIASSGG-LSKDEIELMVGEAERLASTDKEKREAIETKNKADSIIYDTEKSLKE 572 (640)
T ss_pred EEEeecCCceeeeehhhcccCCccceEEeecCC-CCHHHHHHHHHHHHHHHhhhHHHHHHhhhhcchhheecCchhhhhh
Confidence 999999999999999999999999999988755 9999999999999999999999999999999999999999888863
Q ss_pred hhhhccCCHHHHHHHHHhhHHHHHHHhhCCccCHHHHHHHHHHHHHHHHHHHHHHHcccC
Q psy6736 541 EKLKDKISDAERTQILDKCNDVIKWLDANQLAEKEEFEHKQKELEAICNPIITKLYQGSG 600 (1023)
Q Consensus 541 ~~~~~~~~~~e~~~l~~~l~~~~~WL~~~~~a~~~~~~~kl~~L~~~~~pi~~r~~e~~g 600 (1023)
+....+.++..+|...+.+..+.+..-...+.++...+...|++..-|++..++..++
T Consensus 573 --~~~~~~~~~~~~i~~~i~~l~~~~~~~~~~~~~~~k~~~~~l~q~~lkl~es~~k~~~ 630 (640)
T KOG0102|consen 573 --FEEKIPAEECEKLEEKISDLRELVANKDSGDMEEIKKAMSALQQASLKLFESAYKNMG 630 (640)
T ss_pred --hhhhCcHHHHHHHHHHHHHHHHHHhhhccCChhhHHHHHHHHHHhhhHHHHHHHhhhc
Confidence 7778888888899999999888875322233478888999999999999988876543
No 15
>PRK01433 hscA chaperone protein HscA; Provisional
Probab=100.00 E-value=1.2e-78 Score=719.89 Aligned_cols=517 Identities=32% Similarity=0.475 Sum_probs=445.8
Q ss_pred CcccCCCCCeeEEeecccccccceeecccccccCCccccceeeEEEeccCeEEeecCCCceeeeeecccCCcC-------
Q psy6736 1 MAIIHPDHPEVEITEEQSLLIQTSIMDLIGDNLGQGLIKPAFSGIRLEEGAVMLYCSDGYTAGWINSITGDLT------- 73 (1023)
Q Consensus 1 vav~~~~~p~~~~~~~~~~~~~pS~~~~~~~~~g~~~~~ps~v~~~~~~~~~~~G~~~~~~~~~~k~~~g~~~------- 73 (1023)
||+|.++.|.+ |.|.+|++.+||++.+..+. +.+|... ++.++|+++|...
T Consensus 33 va~~~~~~~~i-i~n~~g~~~tPS~V~f~~~~-------------------~~vG~~A--ti~~~KrliG~~~~~~~~~~ 90 (595)
T PRK01433 33 IAIATNRKVKV-IKSIDDKELIPTTIDFTSNN-------------------FTIGNNK--GLRSIKRLFGKTLKEILNTP 90 (595)
T ss_pred EEEEeCCeeEE-EECCCCCeecCeEEEEcCCC-------------------EEECchh--hHHHHHHHhCCCchhhccch
Confidence 57777788877 78877777777777665221 2233211 3344455554321
Q ss_pred ----------------ccccccccccCHHHHHhHhhhhccCcchHHHHHHHHHhCCcCCcceEecCCCCCHHHHHHHHHH
Q psy6736 74 ----------------PWDGARLKAVSAQELSRGVKAIFTAPDILKKKTSEDILRKVDGQNEGLIPAYFNISSVKSTKDS 137 (1023)
Q Consensus 74 ----------------~~~~~~~~~~~~~~v~a~~L~~~~~~~~~l~~~a~~~~~~~~~~~vitVPa~~~~~qr~~l~~A 137 (1023)
..+...+..++|+++++++| ++|++.|+.++|.++.++||||||||++.||+++++|
T Consensus 91 ~~~~~~k~~~~~~~~~~~~~~~~~~~speei~a~iL-------~~lk~~ae~~lg~~v~~aVITVPa~f~~~qR~a~~~A 163 (595)
T PRK01433 91 ALFSLVKDYLDVNSSELKLNFANKQLRIPEIAAEIF-------IYLKNQAEEQLKTNITKAVITVPAHFNDAARGEVMLA 163 (595)
T ss_pred hhHhhhhheeecCCCeeEEEECCEEEcHHHHHHHHH-------HHHHHHHHHHhCCCcceEEEEECCCCCHHHHHHHHHH
Confidence 12222345799999999999 9999999999999999999999999999999999999
Q ss_pred HHHcCCceeeeecchHHHHHHhccccccCccccccCCCCCcEEEEEEeCCceEEEEEEEEeCCEEEEEEecCCCCccHHH
Q psy6736 138 GTIAGLNVLRIINEPTAAAIAYGLDKKVGSTAVEYNGSGERNVLIFDLGGGTFDVSILTIEDGIFEVKSTAGDTHLGGED 217 (1023)
Q Consensus 138 a~~AGl~~~~li~Ep~AAal~y~~~~~~~~~~~~~~~~~~~~vlV~D~GggT~dvsv~~~~~~~~~v~~~~~~~~lGG~~ 217 (1023)
|++||++++++++||+|||++|+.... .+.++||||+||||||+|++++.++.++|+++.||.++||++
T Consensus 164 a~~AGl~v~~li~EPtAAAlay~~~~~-----------~~~~vlV~DlGGGT~DvSi~~~~~~~~~V~at~gd~~lGG~d 232 (595)
T PRK01433 164 AKIAGFEVLRLIAEPTAAAYAYGLNKN-----------QKGCYLVYDLGGGTFDVSILNIQEGIFQVIATNGDNMLGGND 232 (595)
T ss_pred HHHcCCCEEEEecCcHHHHHHHhcccC-----------CCCEEEEEECCCCcEEEEEEEEeCCeEEEEEEcCCcccChHH
Confidence 999999999999999999999987653 456899999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHhhhccCccccHHHHHHHHHHHHHHhHHcCCCCceEEEEecccCCceeEEEecHHHHHHHhHHHHHH
Q psy6736 218 FDNRMVNHFVQEFKRKYKKDLTTNKRALRRLRTACERAKRTLSSSTQASIEIDSLFEGVDFYTSITRARFEELNADLFRG 297 (1023)
Q Consensus 218 ~D~~l~~~l~~~~~~~~~~~~~~~~~~~~~L~~~ae~~K~~Ls~~~~~~i~i~~~~~~~~~~~~itr~~~e~~~~~~~~~ 297 (1023)
||.+|++|+..+|.. ..+.+ .++.||++|+.||.+..... ..++|||++|+++++|++++
T Consensus 233 ~D~~l~~~~~~~~~~------~~~~~----~~~~~ekaK~~LS~~~~~~~----------~~~~itr~efe~l~~~l~~~ 292 (595)
T PRK01433 233 IDVVITQYLCNKFDL------PNSID----TLQLAKKAKETLTYKDSFNN----------DNISINKQTLEQLILPLVER 292 (595)
T ss_pred HHHHHHHHHHHhcCC------CCCHH----HHHHHHHHHHhcCCCccccc----------ceEEEcHHHHHHHHHHHHHH
Confidence 999999999988742 22222 23459999999998764221 16899999999999999999
Q ss_pred HHHHHHHHHHHcCCCccCcCeEEEEcCCCCcHHHHHHHHHHcCCccccccCCCchhHHhHHHHHHHHHhCCCCcceeeeE
Q psy6736 298 TMEPVEKSLRDAKMDKAQIHDIVLVGGSTRIPKVQKLLQDFFNGKELNKSINPDEAVAYGAAVQAAILHGDKSEEVQDLL 377 (1023)
Q Consensus 298 i~~~i~~~l~~~~~~~~~i~~V~LvGG~sr~p~v~~~l~~~f~~~~i~~~~~pd~aVa~GAa~~a~~l~~~~~~~~~~~~ 377 (1023)
+..+++++|++++ +.+|+.|+||||+||+|+|++.|+++| +.++..++|||+|||+|||++|+.+++. ..++.
T Consensus 293 ~~~~i~~~L~~a~--~~~Id~ViLvGGssriP~v~~~l~~~f-~~~~~~~~npdeaVA~GAAi~a~~l~~~----~~~~~ 365 (595)
T PRK01433 293 TINIAQECLEQAG--NPNIDGVILVGGATRIPLIKDELYKAF-KVDILSDIDPDKAVVWGAALQAENLIAP----HTNSL 365 (595)
T ss_pred HHHHHHHHHhhcC--cccCcEEEEECCcccChhHHHHHHHHh-CCCceecCCchHHHHHHHHHHHHHhhCC----ccceE
Confidence 9999999999998 678999999999999999999999999 5677788999999999999999999762 35788
Q ss_pred EeeeccccceEEecCceEEEEEecCCCCCCceEEEEEeccCCCCcEEEEEeecCccccccCceeeEEEecCCCCCCCCCC
Q psy6736 378 LLDVTPLSLGIETAGGVMTALIKRNTTIPTKQTQTFTTYSDNQPGVLIQVYEGERAMTKDNNLLGKFELTSIPPAPRGVP 457 (1023)
Q Consensus 378 ~~d~~~~sigi~~~~~~~~~ii~~~t~ip~~~~~~~~~~~d~q~~~~i~i~~g~~~~~~~~~~lg~~~i~~~~~~~~g~~ 457 (1023)
+.|++|++||+++.+|.+.+|||||+++|+++++.|++..|+|+.+.|+||||++..+.+|..||+|.+.++|+.++|.+
T Consensus 366 l~Dv~p~slgi~~~~g~~~~ii~rnt~iP~~~~~~f~t~~d~q~~v~i~v~qGe~~~~~~n~~lg~~~l~~i~~~~~g~~ 445 (595)
T PRK01433 366 LIDVVPLSLGMELYGGIVEKIIMRNTPIPISVVKEFTTYADNQTGIQFHILQGEREMAADCRSLARFELKGLPPMKAGSI 445 (595)
T ss_pred EEEecccceEEEecCCEEEEEEECCCcccceeeEEeEeecCCCeEEEEEEEeccccccCCCcEEEEEEEcCCCCCCCCCc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred eEEEEEEEcCCcceEEEEEeccCCcceeEEEecCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHhh
Q psy6736 458 QIEVTFDIDANGILNVTAIEKSTGKENKITITNDRGRLSKEDIERMVNDAEKYKAEDEKQKAVISAKNSLESYCFNMKST 537 (1023)
Q Consensus 458 ~i~v~f~~d~~g~l~v~~~~~~t~~~~~~~i~~~~~~ls~~~~~~~~~~~~~~~~~d~~~~~~~~a~N~lE~~iy~~~~~ 537 (1023)
.|+|+|++|.||+|+|++.+..||++..+.+... ..|+++++++++++.+++..+|...++..+++|++|+++|.++..
T Consensus 446 ~i~vtf~id~~Gil~V~a~~~~t~~~~~~~i~~~-~~ls~~ei~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~ 524 (595)
T PRK01433 446 RAEVTFAIDADGILSVSAYEKISNTSHAIEVKPN-HGIDKTEIDIMLENAYKNAKIDYTTRLLQEAVIEAEALIFNIERA 524 (595)
T ss_pred cEEEEEEECCCCcEEEEEEEcCCCcEEEEEecCC-CCCCHHHHHHHHHHHHhhhhhhHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999765 459999999999999999999999999999999999999999999
Q ss_pred hhhhhhhccCCHHHHHHHHHhhHHHHHHHhhCCccCHHHHHHHHHHHHHHHHH
Q psy6736 538 VEDEKLKDKISDAERTQILDKCNDVIKWLDANQLAEKEEFEHKQKELEAICNP 590 (1023)
Q Consensus 538 l~~~~~~~~~~~~e~~~l~~~l~~~~~WL~~~~~a~~~~~~~kl~~L~~~~~p 590 (1023)
+++ +...+++++++++.+.+++.++||..+ +...+++++++|++...+
T Consensus 525 ~~~--~~~~l~~~~~~~i~~~~~~~~~~l~~~---~~~~~~~~~~~~~~~~~~ 572 (595)
T PRK01433 525 IAE--LTTLLSESEISIINSLLDNIKEAVHAR---DIILINNSIKEFKSKIKK 572 (595)
T ss_pred HHH--hhccCCHHHHHHHHHHHHHHHHHHhcC---CHHHHHHHHHHHHHHHHH
Confidence 964 556789999999999999999999865 333444444444444444
No 16
>COG0443 DnaK Molecular chaperone [Posttranslational modification, protein turnover, chaperones]
Probab=100.00 E-value=2.6e-77 Score=703.76 Aligned_cols=547 Identities=49% Similarity=0.728 Sum_probs=507.8
Q ss_pred CcccCCC-CCeeEEeecccccccceeecccccccCCccccceeeEEEeccCeEEee--------cCCCceeeeeecccCC
Q psy6736 1 MAIIHPD-HPEVEITEEQSLLIQTSIMDLIGDNLGQGLIKPAFSGIRLEEGAVMLY--------CSDGYTAGWINSITGD 71 (1023)
Q Consensus 1 vav~~~~-~p~~~~~~~~~~~~~pS~~~~~~~~~g~~~~~ps~v~~~~~~~~~~~G--------~~~~~~~~~~k~~~g~ 71 (1023)
||+|.++ .|.+ +.|.+|.+.+||++.+..+ +.+.+| ..|..+...+|+.+|.
T Consensus 19 vA~~~~~~~~~v-i~n~~g~r~~PSvv~f~~~------------------~~~~vG~~A~~q~~~~p~~t~~~~kr~~G~ 79 (579)
T COG0443 19 VAVMRGGGLPKV-IENAEGERLTPSVVAFSKN------------------GEVLVGQAAKRQAVDNPENTIFSIKRKIGR 79 (579)
T ss_pred EEEEeCCCCceE-ecCCCCCcccceEEEECCC------------------CCEEecHHHHHHhhhCCcceEEEEehhcCC
Confidence 5788877 6777 8888887777777766633 233334 5788899999999996
Q ss_pred cC----ccccccccccCHHHHHhHhhhhccCcchHHHHHHHHHhCCcCCcceEecCCCCCHHHHHHHHHHHHHcCCceee
Q psy6736 72 LT----PWDGARLKAVSAQELSRGVKAIFTAPDILKKKTSEDILRKVDGQNEGLIPAYFNISSVKSTKDSGTIAGLNVLR 147 (1023)
Q Consensus 72 ~~----~~~~~~~~~~~~~~v~a~~L~~~~~~~~~l~~~a~~~~~~~~~~~vitVPa~~~~~qr~~l~~Aa~~AGl~~~~ 147 (1023)
.. ..+...++.++|++|++++| ++|+++|+.+++.++.++||||||||++.||+++++||++|||++++
T Consensus 80 ~~~~~~~~~~~~~~~~~~eeisa~~L-------~~lk~~ae~~lg~~v~~~VItVPayF~d~qR~at~~A~~iaGl~vlr 152 (579)
T COG0443 80 GSNGLKISVEVDGKKYTPEEISAMIL-------TKLKEDAEAYLGEKVTDAVITVPAYFNDAQRQATKDAARIAGLNVLR 152 (579)
T ss_pred CCCCCcceeeeCCeeeCHHHHHHHHH-------HHHHHHHHHhhCCCcceEEEEeCCCCCHHHHHHHHHHHHHcCCCeEE
Confidence 32 34444446899999999999 99999999999999999999999999999999999999999999999
Q ss_pred eecchHHHHHHhccccccCccccccCCCCCcEEEEEEeCCceEEEEEEEEeCCEEEEEEecCCCCccHHHHHHHHHHHHH
Q psy6736 148 IINEPTAAAIAYGLDKKVGSTAVEYNGSGERNVLIFDLGGGTFDVSILTIEDGIFEVKSTAGDTHLGGEDFDNRMVNHFV 227 (1023)
Q Consensus 148 li~Ep~AAal~y~~~~~~~~~~~~~~~~~~~~vlV~D~GggT~dvsv~~~~~~~~~v~~~~~~~~lGG~~~D~~l~~~l~ 227 (1023)
+++||+|||++|+.... .+..++|||+||||||+|++++.++.++++++.||.++||++||.+|++|+.
T Consensus 153 linEPtAAAlayg~~~~-----------~~~~vlV~DlGGGTfDvSll~~~~g~~ev~at~gd~~LGGddfD~~l~~~~~ 221 (579)
T COG0443 153 LINEPTAAALAYGLDKG-----------KEKTVLVYDLGGGTFDVSLLEIGDGVFEVLATGGDNHLGGDDFDNALIDYLV 221 (579)
T ss_pred EecchHHHHHHhHhccC-----------CCcEEEEEEcCCCCEEEEEEEEcCCEEEEeecCCCcccCchhHHHHHHHHHH
Confidence 99999999999999875 6789999999999999999999999999999999999999999999999999
Q ss_pred HHHHhhhccCccccHHHHHHHHHHHHHHhHHcCCCCceEEEEecccCCceeEEEecHHHHHHHhHHHHHHHHHHHHHHHH
Q psy6736 228 QEFKRKYKKDLTTNKRALRRLRTACERAKRTLSSSTQASIEIDSLFEGVDFYTSITRARFEELNADLFRGTMEPVEKSLR 307 (1023)
Q Consensus 228 ~~~~~~~~~~~~~~~~~~~~L~~~ae~~K~~Ls~~~~~~i~i~~~~~~~~~~~~itr~~~e~~~~~~~~~i~~~i~~~l~ 307 (1023)
.+|..+++.++..+++.+++|+.+||++|+.||...++.+.++++..+.++..+|||++||+++.+++.++..++.++|.
T Consensus 222 ~~f~~~~~~d~~~~~~~~~rL~~~ae~aK~~LS~~~~~~i~~~~~~~~~~~~~~ltR~~~E~l~~dll~r~~~~~~~al~ 301 (579)
T COG0443 222 MEFKGKGGIDLRSDKAALQRLREAAEKAKIELSSATQTSINLPSIGGDIDLLKELTRAKFEELILDLLERTIEPVEQALK 301 (579)
T ss_pred HHhhccCCccccccHHHHHHHHHHHHHHHHHcccccccccchhhccccchhhhhhhHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999988877778899999999999999999999999999999
Q ss_pred HcCCCccCcCeEEEEcCCCCcHHHHHHHHHHcCCccccccCCCchhHHhHHHHHHHHHhCCCCcceeeeEEeeeccccce
Q psy6736 308 DAKMDKAQIHDIVLVGGSTRIPKVQKLLQDFFNGKELNKSINPDEAVAYGAAVQAAILHGDKSEEVQDLLLLDVTPLSLG 387 (1023)
Q Consensus 308 ~~~~~~~~i~~V~LvGG~sr~p~v~~~l~~~f~~~~i~~~~~pd~aVa~GAa~~a~~l~~~~~~~~~~~~~~d~~~~sig 387 (1023)
++++++.+|+.|+||||++|||.|++.++++|+ +++...+|||++||.|||++|+.+++.. .++.+.|++|+++|
T Consensus 302 ~a~l~~~~I~~VilvGGstriP~V~~~v~~~f~-~~~~~~inpdeava~GAa~qa~~l~~~~----~d~ll~Dv~plslg 376 (579)
T COG0443 302 DAGLEKSDIDLVILVGGSTRIPAVQELVKEFFG-KEPEKSINPDEAVALGAAIQAAVLSGEV----PDVLLLDVIPLSLG 376 (579)
T ss_pred HcCCChhhCceEEEccceeccHHHHHHHHHHhC-ccccccCCccHHHHHHHHHHHHhhcCcc----cCceEEeeeeeccc
Confidence 999999999999999999999999999999995 8888999999999999999999998732 38899999999999
Q ss_pred EEecCceEEEEEecCCCCCCceEEEEEeccCCCCcEEEEEeecCccccccCceeeEEEecCCCCCCCCCCeEEEEEEEcC
Q psy6736 388 IETAGGVMTALIKRNTTIPTKQTQTFTTYSDNQPGVLIQVYEGERAMTKDNNLLGKFELTSIPPAPRGVPQIEVTFDIDA 467 (1023)
Q Consensus 388 i~~~~~~~~~ii~~~t~ip~~~~~~~~~~~d~q~~~~i~i~~g~~~~~~~~~~lg~~~i~~~~~~~~g~~~i~v~f~~d~ 467 (1023)
++..++.+.++|++|+.+|.++...|++..|+|..+.+++++|++....+|..+|.|.+.++|+.++|.+.|+++|.+|.
T Consensus 377 ie~~~~~~~~ii~rn~~iP~~~~~~f~t~~d~q~~~~i~v~qge~~~~~~~~~lg~f~l~~i~~~~~g~~~i~v~f~iD~ 456 (579)
T COG0443 377 IETLGGVRTPIIERNTTIPVKKSQEFSTAADGQTAVAIHVFQGEREMAADNKSLGRFELDGIPPAPRGVPQIEVTFDIDA 456 (579)
T ss_pred cccCcchhhhHHhcCCCCCcccceEEEeecCCCceeEEEEEecchhhcccCceeEEEECCCCCCCCCCCCceEEEeccCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CcceEEEEEeccCCcceeEEEecCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHhhhhhhhhhccC
Q psy6736 468 NGILNVTAIEKSTGKENKITITNDRGRLSKEDIERMVNDAEKYKAEDEKQKAVISAKNSLESYCFNMKSTVEDEKLKDKI 547 (1023)
Q Consensus 468 ~g~l~v~~~~~~t~~~~~~~i~~~~~~ls~~~~~~~~~~~~~~~~~d~~~~~~~~a~N~lE~~iy~~~~~l~~~~~~~~~ 547 (1023)
||+++|++.+..+|++..+++....+ |++++++.+.+..+.+.+.|...++..+.+|..+++++.++..|.+. . .+
T Consensus 457 ~gi~~v~a~~~~~~k~~~i~i~~~~~-ls~~~i~~~~~~a~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~l~~~--~-~~ 532 (579)
T COG0443 457 NGILNVTAKDLGTGKEQSITIKASSG-LSDEEIERMVEDAEANAALDKKFRELVEARNEAESLIYSLEKALKEI--V-KV 532 (579)
T ss_pred CcceEeeeecccCCceEEEEEecCCC-CCHHHHHHHHHHHHHHHhhHHHHHHHHHhhHHHHHHHHHHHHHHhhh--c-cC
Confidence 99999999999999999999999887 99999999999999999999999999999999999999999999763 3 89
Q ss_pred CHHHHHHHHHhhHHHHHHHhhCCccCHHHHHHHHHHHHHHHHHHHHHHHc
Q psy6736 548 SDAERTQILDKCNDVIKWLDANQLAEKEEFEHKQKELEAICNPIITKLYQ 597 (1023)
Q Consensus 548 ~~~e~~~l~~~l~~~~~WL~~~~~a~~~~~~~kl~~L~~~~~pi~~r~~e 597 (1023)
+++++.++.+.+.+.++||+. . .++++.+.++|+....++..++++
T Consensus 533 ~~~~~~~~~~~~~~~~~~l~~-~---~~~~~~~~~~l~~~~~~~~~~~~~ 578 (579)
T COG0443 533 SEEEKEKIEEAITDLEEALEG-E---KEEIKAKIEELQEVTQKLAEKKYQ 578 (579)
T ss_pred CHHHHHHHHHHHHHHHHHHhc-c---HHHHHHHHHHHHHHHHHHHHHHhc
Confidence 999999999999999999987 2 889999999999999999887654
No 17
>KOG0100|consensus
Probab=100.00 E-value=9.1e-78 Score=623.51 Aligned_cols=366 Identities=65% Similarity=1.039 Sum_probs=354.8
Q ss_pred ccCCCCcceEEEEEeCCceEEEEEEEEeCCEEEEEEecCCCCCcHHHHHHHHHHHHHHHHHhhhccCcchhHHHHHHHHH
Q psy6736 628 IEEGSGERNVLIFDLGGGTFDVSILTIEDGIFEVKSTAGDTHLGGEDFDNRMVNHFVQEFKRKYKKDLTTNKRALRRLRT 707 (1023)
Q Consensus 628 ~~~~~~~~~vlV~D~GggT~dvsi~~~~~~~~~v~~~~gd~~lGG~~~D~~l~~~~~~~~~~~~~~~~~~~~~~~~~L~~ 707 (1023)
++..+.++++||||+||||||||++.+.+|.|+|+++.||.||||+|||.++++||.+.++++++.|++.+.+++++|++
T Consensus 218 LDKk~gEknilVfDLGGGTFDVSlLtIdnGVFeVlaTnGDThLGGEDFD~rvm~~fiklykkK~gkDv~kdnkA~~KLrR 297 (663)
T KOG0100|consen 218 LDKKDGEKNILVFDLGGGTFDVSLLTIDNGVFEVLATNGDTHLGGEDFDQRVMEYFIKLYKKKHGKDVRKDNKAVQKLRR 297 (663)
T ss_pred ccccCCcceEEEEEcCCceEEEEEEEEcCceEEEEecCCCcccCccchHHHHHHHHHHHHhhhcCCccchhhHHHHHHHH
Confidence 56778889999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHhhhcCCCceeEEEEecccCCcceEEEecHHHHHHHHHHHHHHHHHHHHHHHHHcCCCccccceEEEecCccCcHH
Q psy6736 708 ACERAKRTLSSSTQASIEIDSLFEGVDFYTSITRARFEELNADLFRGTMEPVEKSLRDAKMDKAQIHDIVLVGGSTRIPK 787 (1023)
Q Consensus 708 ~~e~~K~~Ls~~~~~~~~i~~~~~~~~~~~~itr~~~~~~~~~~~~~~~~~i~~~l~~~~~~~~~i~~V~LvGG~srip~ 787 (1023)
+||+||++||++.++.++|+++++|.||+-++||..||++..++|..+++|++++|+++++.+.+|+.|+|||||+|||.
T Consensus 298 e~EkAKRaLSsqhq~riEIeS~fdG~DfSEtLtRAkFEElNmDLFr~TlkPv~kvl~Ds~lkKsdideiVLVGGsTrIPK 377 (663)
T KOG0100|consen 298 EVEKAKRALSSQHQVRIEIESLFDGVDFSETLTRAKFEELNMDLFRKTLKPVQKVLEDSDLKKSDIDEIVLVGGSTRIPK 377 (663)
T ss_pred HHHHHHhhhccccceEEeeeeccccccccchhhhhHHHHhhhHHHHHhhHHHHHHHhhcCcccccCceEEEecCcccChh
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhhcCcccCCCCCCccceecchHHHHHHHhCCCcccccceEEeeccceeeEEEeeCceeEEeecCCCCCCcceE
Q psy6736 788 VQKLLQDFFNGKELNKSINPDEAVAYGAAVQAAILHGDKSEEVQDLLLLDVTPLSLGIETAGGVMTALIKRNTTIPTKQT 867 (1023)
Q Consensus 788 v~~~l~~~f~~~~~~~~~~p~~aVa~GAa~~a~~l~~~~~~~~~~~~~~d~~~~sigi~~~~~~~~~ii~~~~~lP~~~~ 867 (1023)
||++|+++|.++++...+|||||||+|||.+|..++|. ....++++.|++|.++||++.+|.|+.+|||||.+|++++
T Consensus 378 vQqllk~fF~GKepskGinPdEAVAYGAAVQaGvlsGe--e~t~divLLDv~pLtlGIETvGGVMTklI~RNTviPTkKS 455 (663)
T KOG0100|consen 378 VQQLLKDFFNGKEPSKGINPDEAVAYGAAVQAGVLSGE--EDTGDIVLLDVNPLTLGIETVGGVMTKLIPRNTVIPTKKS 455 (663)
T ss_pred HHHHHHHHhCCCCccCCCChHHHHHhhhhhhhcccccc--cCcCcEEEEeeccccceeeeecceeeccccCCcccCcccc
Confidence 99999999999999999999999999999999999985 4678999999999999999999999999999999999999
Q ss_pred EEEEeecCCCCcEEEEEeecCccccccCceeeEEEEecCCCCCCCCCeEEEEEEECCCccEEEEEEEcccCceeeEEecc
Q psy6736 868 QTFTTYSDNQPGVLIQVYEGERAMTKDNNLLGKFELTSIPPAPRGVPQIEVTFDIDANGILNVTAIEKSTGKENKITITN 947 (1023)
Q Consensus 868 ~~f~~~~~~q~~i~i~iyeg~~~~~~~~~~ig~~~l~~~~~~~~g~~~i~v~f~id~~gil~V~a~~~~~~~~~~~~~~~ 947 (1023)
+.|+++.|+|+.+.|.||+|++.+.++|+.||.|.+.++||+|+|.|+|+|+|++|.||||+|+|.++.+|+.++
T Consensus 456 QvFsTa~DnQ~tV~I~vyEGER~mtkdn~lLGkFdltGipPAPRGvpqIEVtFevDangiL~VsAeDKgtg~~~k----- 530 (663)
T KOG0100|consen 456 QVFSTAQDNQPTVTIQVYEGERPMTKDNHLLGKFDLTGIPPAPRGVPQIEVTFEVDANGILQVSAEDKGTGKKEK----- 530 (663)
T ss_pred ceeeecccCCceEEEEEeeccccccccccccccccccCCCCCCCCCccEEEEEEEccCceEEEEeeccCCCCcce-----
Confidence 999999999999999999999999999999999999999999999999999999999999999999999887554
Q ss_pred ccccccccccccccccCcccceEEeeCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHhhcc
Q psy6736 948 DRGRRYLNVTAIEKSTGKENKITITNDRGRLSKEDIERMVNDAEKYKAEDEKQKAVISAKNSLESYCFNMKSKG 1021 (1023)
Q Consensus 948 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ls~eei~~~~~~~~~~~~~d~~~~~~~~akN~lE~~iy~~r~k~ 1021 (1023)
++|+|+.++||+|+|++|.+..++++++|+...++.++||+||+|.|+|++.+
T Consensus 531 ---------------------itItNd~~rLt~EdIerMv~eAekFAeeDk~~KekieaRN~LE~YayslKnqi 583 (663)
T KOG0100|consen 531 ---------------------ITITNDKGRLTPEDIERMVNEAEKFAEEDKKLKEKIEARNELESYAYSLKNQI 583 (663)
T ss_pred ---------------------EEEecCCCCCCHHHHHHHHHHHHHHhhhhHHHHHHHHhHHHHHHHHHHhhhcc
Confidence 55666678999999999999999999999999999999999999999999875
No 18
>PF00012 HSP70: Hsp70 protein; InterPro: IPR013126 Heat shock proteins, Hsp70 chaperones help to fold many proteins. Hsp70 assisted folding involves repeated cycles of substrate binding and release. Hsp70 activity is ATP dependent. Hsp70 proteins are made up of two regions: the amino terminus is the ATPase domain and the carboxyl terminus is the substrate binding region []. Hsp70 proteins have an average molecular weight of 70 kDa [, , ]. In most species,there are many proteins that belong to the hsp70 family. Some of these are only expressed under stress conditions (strictly inducible), while some are present in cells under normal growth conditions and are not heat-inducible (constitutive or cognate) [, ]. Hsp70 proteins can be found in different cellular compartments(nuclear, cytosolic, mitochondrial, endoplasmic reticulum, for example).; PDB: 2P32_D 3D2F_A 2QXL_A 3D2E_C 3C7N_A 3FE1_C 4ANI_C 2V7Y_A 2KHO_A 3DPQ_B ....
Probab=100.00 E-value=1.2e-74 Score=706.76 Aligned_cols=551 Identities=42% Similarity=0.686 Sum_probs=484.1
Q ss_pred CcccCCCCCeeEEeecccccccceeecccccccCCccccceeeEEEeccCeEEee--------cCCCceeeeeecccCCc
Q psy6736 1 MAIIHPDHPEVEITEEQSLLIQTSIMDLIGDNLGQGLIKPAFSGIRLEEGAVMLY--------CSDGYTAGWINSITGDL 72 (1023)
Q Consensus 1 vav~~~~~p~~~~~~~~~~~~~pS~~~~~~~~~g~~~~~ps~v~~~~~~~~~~~G--------~~~~~~~~~~k~~~g~~ 72 (1023)
||++.++.|.+ |.|.+|++.+||++.+..+ ...+| ..|..++..+|+++|..
T Consensus 13 va~~~~~~~~i-i~~~~~~~~~ps~v~~~~~-------------------~~~~G~~a~~~~~~~~~~~~~~~k~liG~~ 72 (602)
T PF00012_consen 13 VAVFKNGKPEI-ILNEEGKRKTPSVVSFSDN-------------------ERLVGEDAKSQMIRNPKNTIYNLKRLIGRK 72 (602)
T ss_dssp EEEEETTEEEE-E--TTS-SSEESEEEEESS-------------------CEEETHHHHHTTTTSGGGEEESGGGTTTSB
T ss_pred EEEEEeccccc-cccccccccccceeeEeee-------------------cccCCcchhhhccccccccccccccccccc
Confidence 57778888877 7888888888888776632 11222 33455566666666652
Q ss_pred C-------------------------cccc--ccccccCHHHHHhHhhhhccCcchHHHHHHHHHhCCcCCcceEecCCC
Q psy6736 73 T-------------------------PWDG--ARLKAVSAQELSRGVKAIFTAPDILKKKTSEDILRKVDGQNEGLIPAY 125 (1023)
Q Consensus 73 ~-------------------------~~~~--~~~~~~~~~~v~a~~L~~~~~~~~~l~~~a~~~~~~~~~~~vitVPa~ 125 (1023)
. +.+. +....++|+++++++| ++|++.|+.+++..+.++|||||++
T Consensus 73 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l-------~~l~~~a~~~~~~~~~~~vitVPa~ 145 (602)
T PF00012_consen 73 FDDPDVQKEKKKFPYKVVEDPDGKVYFEVDYDGKSKTYSPEELSAMIL-------KYLKEMAEKYLGEKVTDVVITVPAY 145 (602)
T ss_dssp TTSHHHHHHHTTSSSEEEEETTTEEEEEEEETTEEEEEEHHHHHHHHH-------HHHHHHHHHHHTSBEEEEEEEE-TT
T ss_pred ccccccchhhhcccccccccccccccccccccccceeeeeecccccch-------hhhcccchhhcccccccceeeechh
Confidence 1 1111 1224789999999999 9999999999999999999999999
Q ss_pred CCHHHHHHHHHHHHHcCCceeeeecchHHHHHHhccccccCccccccCCCCCcEEEEEEeCCceEEEEEEEEeCCEEEEE
Q psy6736 126 FNISSVKSTKDSGTIAGLNVLRIINEPTAAAIAYGLDKKVGSTAVEYNGSGERNVLIFDLGGGTFDVSILTIEDGIFEVK 205 (1023)
Q Consensus 126 ~~~~qr~~l~~Aa~~AGl~~~~li~Ep~AAal~y~~~~~~~~~~~~~~~~~~~~vlV~D~GggT~dvsv~~~~~~~~~v~ 205 (1023)
|++.||++|++||+.|||++++||+||+|||++|+..+.. .+.++|||||||||+|+|++++.++.++++
T Consensus 146 ~~~~qr~~~~~Aa~~agl~~~~li~Ep~Aaa~~y~~~~~~----------~~~~vlv~D~Gggt~dvs~~~~~~~~~~v~ 215 (602)
T PF00012_consen 146 FTDEQRQALRDAAELAGLNVLRLINEPTAAALAYGLERSD----------KGKTVLVVDFGGGTFDVSVVEFSNGQFEVL 215 (602)
T ss_dssp --HHHHHHHHHHHHHTT-EEEEEEEHHHHHHHHTTTTSSS----------SEEEEEEEEEESSEEEEEEEEEETTEEEEE
T ss_pred hhhhhhhcccccccccccccceeecccccccccccccccc----------cccceeccccccceEeeeehhccccccccc
Confidence 9999999999999999999999999999999999877652 478999999999999999999999999999
Q ss_pred EecCCCCccHHHHHHHHHHHHHHHHHhhhccCccccHHHHHHHHHHHHHHhHHcCC--CCceEEEEecccC-CceeEEEe
Q psy6736 206 STAGDTHLGGEDFDNRMVNHFVQEFKRKYKKDLTTNKRALRRLRTACERAKRTLSS--STQASIEIDSLFE-GVDFYTSI 282 (1023)
Q Consensus 206 ~~~~~~~lGG~~~D~~l~~~l~~~~~~~~~~~~~~~~~~~~~L~~~ae~~K~~Ls~--~~~~~i~i~~~~~-~~~~~~~i 282 (1023)
++.++..+||.+||.+|++|+.++|+.+++.+...+++.+.+|+.+||++|+.||. +.+..+.++.+.+ |.++.+.|
T Consensus 216 ~~~~~~~lGG~~~D~~l~~~~~~~~~~~~~~d~~~~~~~~~~L~~~~e~~K~~Ls~~~~~~~~~~~~~~~~~~~~~~~~i 295 (602)
T PF00012_consen 216 ATAGDNNLGGRDFDEALAEYLLEKFKKKYKIDLRENPRAMARLLEAAEKAKEQLSSNDNTEITISIESLYDDGEDFSITI 295 (602)
T ss_dssp EEEEETTCSHHHHHHHHHHHHHHHHHHHHSS-GTCSHHHHHHHHHHHHHHHHHTTTSSSSEEEEEEEEEETTTEEEEEEE
T ss_pred ccccccccccceecceeecccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc
Confidence 99999999999999999999999999998888889999999999999999999999 6667778887777 88999999
Q ss_pred cHHHHHHHhHHHHHHHHHHHHHHHHHcCCCccCcCeEEEEcCCCCcHHHHHHHHHHcCCccccccCCCchhHHhHHHHHH
Q psy6736 283 TRARFEELNADLFRGTMEPVEKSLRDAKMDKAQIHDIVLVGGSTRIPKVQKLLQDFFNGKELNKSINPDEAVAYGAAVQA 362 (1023)
Q Consensus 283 tr~~~e~~~~~~~~~i~~~i~~~l~~~~~~~~~i~~V~LvGG~sr~p~v~~~l~~~f~~~~i~~~~~pd~aVa~GAa~~a 362 (1023)
||++|+++++|+++++..+|+++|+++++++.+|+.|+||||+||+|+|++.|++.|+ ..+..++||++|||+|||++|
T Consensus 296 tr~~fe~l~~~~~~~~~~~i~~~l~~~~~~~~~i~~V~lvGG~sr~p~v~~~l~~~f~-~~~~~~~~p~~aVA~GAa~~a 374 (602)
T PF00012_consen 296 TREEFEELCEPLLERIIEPIEKALKDAGLKKEDIDSVLLVGGSSRIPYVQEALKELFG-KKISKSVNPDEAVARGAALYA 374 (602)
T ss_dssp EHHHHHHHTHHHHHHTHHHHHHHHHHTT--GGGESEEEEESGGGGSHHHHHHHHHHTT-SEEB-SS-TTTHHHHHHHHHH
T ss_pred ccceecccccccccccccccccccccccccccccceeEEecCcccchhhhhhhhhccc-cccccccccccccccccccch
Confidence 9999999999999999999999999999999999999999999999999999999995 778889999999999999999
Q ss_pred HHHhCCCCcceeeeEEeeeccccceEEecCceEEEEEecCCCCCCceEEEEEeccCCCCcEEEEEeecCccccccCceee
Q psy6736 363 AILHGDKSEEVQDLLLLDVTPLSLGIETAGGVMTALIKRNTTIPTKQTQTFTTYSDNQPGVLIQVYEGERAMTKDNNLLG 442 (1023)
Q Consensus 363 ~~l~~~~~~~~~~~~~~d~~~~sigi~~~~~~~~~ii~~~t~ip~~~~~~~~~~~d~q~~~~i~i~~g~~~~~~~~~~lg 442 (1023)
+.+++ .++.+++.+.|++|++||++..++.+.+++++|+++|...+..|.+..++|..+.+.+|+|+.....+|..+|
T Consensus 375 ~~~~~--~~~~~~~~~~d~~~~~~~i~~~~~~~~~ii~~~t~iP~~~~~~~~t~~~~~~~i~i~i~~g~~~~~~~~~~ig 452 (602)
T PF00012_consen 375 AILSG--SFRVKDIKIIDVTPFSIGIEVSNGKFSKIIPKNTPIPSKKSKSFKTVTDNQTSISIDIYEGESSSFEDNKKIG 452 (602)
T ss_dssp HHHHT--SCSSTSSCESEBESSEEEEEETTTEEEEEESTTEBSSEEEEEEEEESSTTCSEEEEEEEESSSSBGGGSEEEE
T ss_pred hhhcc--ccccccccccccccccccccccccccccccccccccccccccccchhccccccccceeeeccccccccccccc
Confidence 99987 4667788999999999999999999999999999999999999999999999999999999999989999999
Q ss_pred EEEecCCCCCCCCCCeEEEEEEEcCCcceEEEEEeccCCcceeEEEecCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy6736 443 KFELTSIPPAPRGVPQIEVTFDIDANGILNVTAIEKSTGKENKITITNDRGRLSKEDIERMVNDAEKYKAEDEKQKAVIS 522 (1023)
Q Consensus 443 ~~~i~~~~~~~~g~~~i~v~f~~d~~g~l~v~~~~~~t~~~~~~~i~~~~~~ls~~~~~~~~~~~~~~~~~d~~~~~~~~ 522 (1023)
++.+.++++.+.|.++|+++|++|.+|+|+|++.+..++....+++..... ++.++++++.++++++..+|+.++++.+
T Consensus 453 ~~~i~~i~~~~~g~~~i~v~f~ld~~Gil~V~~~~~~~~~~~~~~v~~~~~-~~~~~~~~~~~~~~~~~~~d~~~~~~~e 531 (602)
T PF00012_consen 453 SYTISGIPPAPKGKPKIKVTFELDENGILSVEAAEVETGKEEEVTVKKKET-LSKEEIEELKKKLEEMDEEDEERRERAE 531 (602)
T ss_dssp EEEEES-SSSSTTSSEEEEEEEEETTSEEEEEEEETTTTEEEEEEEESSSS-SCHHHHHHHHHHHHHTHHHHHHHHHHHH
T ss_pred cccccccccccccccceeeEEeeeeeeehhhhhcccccccccccccccccc-cccccccccccccchhhhhhhhhhhccc
Confidence 999999999999999999999999999999999999999888888887755 9999999999999999999999999999
Q ss_pred HHHhHHHHHHHHHhhhhhhhhhccCCHHHHHHHHHhhHHHHHHHhhC-CccCHHHHHHHHHHHHHHHHHHHHHHHc
Q psy6736 523 AKNSLESYCFNMKSTVEDEKLKDKISDAERTQILDKCNDVIKWLDAN-QLAEKEEFEHKQKELEAICNPIITKLYQ 597 (1023)
Q Consensus 523 a~N~lE~~iy~~~~~l~~~~~~~~~~~~e~~~l~~~l~~~~~WL~~~-~~a~~~~~~~kl~~L~~~~~pi~~r~~e 597 (1023)
++|+||+++|++|+.+++. ...++++++ .+.+++..+||+++ .+++.++|++|+++|++..+||..|+++
T Consensus 532 ~kn~lE~~i~~~r~~l~~~--~~~~~~~~~---~~~l~~~~~wl~~~~~~~~~~e~~~kl~~L~~~~~~i~~r~~~ 602 (602)
T PF00012_consen 532 AKNELESYIYELRDKLEED--KDFVSEEEK---KKKLKETSDWLEDNGEDADKEEYKEKLEELKKVIEPIKKRYMQ 602 (602)
T ss_dssp HHHHHHHHHHHHHHHHTCC--GGGSTHHHH---HHHHHHHHHHHHHHTTTSHHHHHHHHHHHHHHHHHHHHHHHCC
T ss_pred cHHHHHHHHHHHHHHHHhh--hccCCHHHH---HHHHHHHHHHHHhhccCCCHHHHHHHHHHHHHHHHHHHHHhcC
Confidence 9999999999999999874 677777777 78888999999887 4678999999999999999999999863
No 19
>KOG0103|consensus
Probab=100.00 E-value=2.1e-69 Score=602.21 Aligned_cols=499 Identities=30% Similarity=0.513 Sum_probs=449.1
Q ss_pred ccccccCHHHHHhHhhhhccCcchHHHHHHHHHhCCcCCcceEecCCCCCHHHHHHHHHHHHHcCCceeeeecchHHHHH
Q psy6736 78 ARLKAVSAQELSRGVKAIFTAPDILKKKTSEDILRKVDGQNEGLIPAYFNISSVKSTKDSGTIAGLNVLRIINEPTAAAI 157 (1023)
Q Consensus 78 ~~~~~~~~~~v~a~~L~~~~~~~~~l~~~a~~~~~~~~~~~vitVPa~~~~~qr~~l~~Aa~~AGl~~~~li~Ep~AAal 157 (1023)
+....|+|++|.||+| .+|++.|+..+..++.+|||+||+||++.||+++.+||+.|||++++|++|.+|+|+
T Consensus 107 ge~~~ft~~Qv~Am~l-------~klk~~ae~~l~~~v~DcvIavP~~FTd~qRravldAA~iagLn~lrLmnd~TA~Al 179 (727)
T KOG0103|consen 107 GEKHPFTPEQVLAMLL-------TKLKATAEKNLKSPVSDCVIAVPSYFTDSQRRAVLDAARIAGLNPLRLMNDTTATAL 179 (727)
T ss_pred cCCCCCChHHHHHHHH-------HHHHHHHHHhcCCCCCCeeEeccccccHHHHHHHHhHHhhcCccceeeeecchHhHh
Confidence 3447899999999999 999999999999999999999999999999999999999999999999999999999
Q ss_pred HhccccccCccccccCCCCCcEEEEEEeCCceEEEEEEEEeCCEEEEEEecCCCCccHHHHHHHHHHHHHHHHHhhhccC
Q psy6736 158 AYGLDKKVGSTAVEYNGSGERNVLIFDLGGGTFDVSILTIEDGIFEVKSTAGDTHLGGEDFDNRMVNHFVQEFKRKYKKD 237 (1023)
Q Consensus 158 ~y~~~~~~~~~~~~~~~~~~~~vlV~D~GggT~dvsv~~~~~~~~~v~~~~~~~~lGG~~~D~~l~~~l~~~~~~~~~~~ 237 (1023)
+||+.+...+ -+..++.+++++|+|++++.+|++.|..|.+.++++.+|.++||++||+.|.+|+..+|+.+++++
T Consensus 180 ~ygiyKtDLP----~~~ekpr~v~fvD~GHS~~q~si~aF~kG~lkvl~ta~D~~lGgr~fDe~L~~hfa~efk~kykid 255 (727)
T KOG0103|consen 180 AYGIYKTDLP----ENEEKPRNVVFVDIGHSSYQVSIAAFTKGKLKVLATAFDRKLGGRDFDEALIDHFAKEFKTKYKID 255 (727)
T ss_pred hcccccccCC----CcccCcceEEEEecccccceeeeeeeccCcceeeeeecccccccchHHHHHHHHHHHHhccccccc
Confidence 9999887432 234468899999999999999999999999999999999999999999999999999999999999
Q ss_pred ccccHHHHHHHHHHHHHHhHHcCCCCceEEEEecccCCceeEEEecHHHHHHHhHHHHHHHHHHHHHHHHHcCCCccCcC
Q psy6736 238 LTTNKRALRRLRTACERAKRTLSSSTQASIEIDSLFEGVDFYTSITRARFEELNADLFRGTMEPVEKSLRDAKMDKAQIH 317 (1023)
Q Consensus 238 ~~~~~~~~~~L~~~ae~~K~~Ls~~~~~~i~i~~~~~~~~~~~~itr~~~e~~~~~~~~~i~~~i~~~l~~~~~~~~~i~ 317 (1023)
...++++..||+.+||+.|+.||+++....+|++++++.|.+..|+|++||+++.|+++++..++.++|+++++..+||+
T Consensus 256 v~sn~kA~lRL~~~~EKlKK~lSAN~~~plNIEcfM~d~dvs~~i~ReEfEel~~plL~rv~~p~~~~l~d~~l~~edi~ 335 (727)
T KOG0103|consen 256 VRSNAKAKLRLLAECEKLKKVLSANTELPLNIECFMNDKDVSSKIKREEFEELSAPLLERVEVPLLKALADAKLKVEDIH 335 (727)
T ss_pred hhhchhHHHHHHHHHHHHHHHhhcCcCCCcchhheeecchhhhhccHHHHHHHHHHHHHhhhHHHHHHHHHhcCccccce
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred eEEEEcCCCCcHHHHHHHHHHcCCccccccCCCchhHHhHHHHHHHHHhCCCCcceeeeEEeeeccccceEEec----C-
Q psy6736 318 DIVLVGGSTRIPKVQKLLQDFFNGKELNKSINPDEAVAYGAAVQAAILHGDKSEEVQDLLLLDVTPLSLGIETA----G- 392 (1023)
Q Consensus 318 ~V~LvGG~sr~p~v~~~l~~~f~~~~i~~~~~pd~aVa~GAa~~a~~l~~~~~~~~~~~~~~d~~~~sigi~~~----~- 392 (1023)
.|.+|||+||+|.|++.|.++| ++++..++|.|+|||+|||+++|++++ .++++.+.+.|+.||+|.+.+. +
T Consensus 336 ~VEiVGg~sripaike~Is~~F-gke~s~TlN~dEavarG~ALqcAIlSP--~frVRef~v~Di~pysIs~~w~~~~ed~ 412 (727)
T KOG0103|consen 336 AVEIVGGLSRIPAIKEMISDFF-GKELSRTLNQDEAVARGAALQCAILSP--TFRVREFSVEDIVPYSISLRWVKQGEDG 412 (727)
T ss_pred eEEEecCcccchHHHHHHHHHh-CCcccccccHHHHHHHhHHHHHHhcCc--cccceecceecccceeEEEEeccccccC
Confidence 9999999999999999999999 899999999999999999999999998 7899999999999999988743 2
Q ss_pred ceEEEEEecCCCCCCceEEEEEeccCCCCcEEEEEeecC-ccccccCceeeEEEecCCCCCCC-CCCeEEEEEEEcCCcc
Q psy6736 393 GVMTALIKRNTTIPTKQTQTFTTYSDNQPGVLIQVYEGE-RAMTKDNNLLGKFELTSIPPAPR-GVPQIEVTFDIDANGI 470 (1023)
Q Consensus 393 ~~~~~ii~~~t~ip~~~~~~~~~~~d~q~~~~i~i~~g~-~~~~~~~~~lg~~~i~~~~~~~~-g~~~i~v~f~~d~~g~ 470 (1023)
+....+||+|.++|.++..+|.... .+.+.++++. ..++.....|+++.+.++.+... ...+++|...++.+|+
T Consensus 413 ~~~~evF~~~~~~p~~K~lT~~Rk~----~F~lea~yt~~~~lp~~~~kI~~~~i~~v~~~~~ge~skVKvkvr~n~~Gi 488 (727)
T KOG0103|consen 413 GSVTEVFPKGHPSPSVKLLTFNRKG----PFTLEAKYTKVNKLPYPKPKIEKWTITGVTPSEDGEFSKVKVKVRLNEHGI 488 (727)
T ss_pred CCceeeecCCCCCCCceEEEEEecC----ceEEEEEeccccccCCCCCceeeEEecccccCccccccceeEEEEEcCccc
Confidence 5557899999999999999887543 4677776654 55665667899999998887766 4568999999999999
Q ss_pred eEEEEEec--------------c--------------CCc----ceeEEEec-CCCCCcHHHHHHHHHHHHHHHHHHHHH
Q psy6736 471 LNVTAIEK--------------S--------------TGK----ENKITITN-DRGRLSKEDIERMVNDAEKYKAEDEKQ 517 (1023)
Q Consensus 471 l~v~~~~~--------------~--------------t~~----~~~~~i~~-~~~~ls~~~~~~~~~~~~~~~~~d~~~ 517 (1023)
.+|..... . .++ ...+.+.. ..+.|+..+++..++++.+|...|+..
T Consensus 489 ~~i~sA~~~e~~~veev~~~~~e~~~~~~~~~~~~~~~~k~kvk~~~L~~~~~~~~~l~~~~l~~~~e~E~~M~~qD~~~ 568 (727)
T KOG0103|consen 489 DTIESATLIEDIEVEEVPEEPMEYDDAAKMLERIAPAENKKKVKKVDLPIEAYTKGALITDELELYIEKENKMILQDKLE 568 (727)
T ss_pred eeeecceeecccchhccccchhhhhcchhhhhhhccccccceeeeccccceeeeccccCHHHHHHHHHHHHHhhhhhhhh
Confidence 98864210 0 000 01122222 235799999999999999999999999
Q ss_pred HHHHHHHHhHHHHHHHHHhhhhhhhhhccCCHHHHHHHHHhhHHHHHHHhhC-CccCHHHHHHHHHHHHHHHHHHHHHHH
Q psy6736 518 KAVISAKNSLESYCFNMKSTVEDEKLKDKISDAERTQILDKCNDVIKWLDAN-QLAEKEEFEHKQKELEAICNPIITKLY 596 (1023)
Q Consensus 518 ~~~~~a~N~lE~~iy~~~~~l~~~~~~~~~~~~e~~~l~~~l~~~~~WL~~~-~~a~~~~~~~kl~~L~~~~~pi~~r~~ 596 (1023)
.++..++|.||+|+|.+|++|.+ .|.++++++++++|...++++++|||++ ++.++..|..|+.+|+.+++ ..|+.
T Consensus 569 ~Et~D~KNaleeyVY~~R~kl~~-~y~~f~~~a~~e~~~~~l~~~E~wlyedGed~~k~~Y~~kl~elk~~g~--~~r~~ 645 (727)
T KOG0103|consen 569 KETVDAKNALEEYVYDMRDKLSD-KYEDFITDAEREKLKKMLTDTEEWLYEDGEDQTKAVYVAKLEELKKLGD--KKRFD 645 (727)
T ss_pred hhhccHHHHHHHHHHHHHHHhhh-hhhhhcCHHHHHHHHHHHHHHHHHHHhcCcccchHHHHHHHHHHHhhhh--hhhhh
Confidence 99999999999999999999986 6899999999999999999999999987 48999999999999999998 66666
Q ss_pred c
Q psy6736 597 Q 597 (1023)
Q Consensus 597 e 597 (1023)
+
T Consensus 646 e 646 (727)
T KOG0103|consen 646 E 646 (727)
T ss_pred h
Confidence 5
No 20
>KOG0104|consensus
Probab=100.00 E-value=3.6e-65 Score=567.80 Aligned_cols=497 Identities=28% Similarity=0.447 Sum_probs=435.1
Q ss_pred cccCHHHHHhHhhhhccCcchHHHHHHHHHhCCcCCcceEecCCCCCHHHHHHHHHHHHHcCCceeeeecchHHHHHHhc
Q psy6736 81 KAVSAQELSRGVKAIFTAPDILKKKTSEDILRKVDGQNEGLIPAYFNISSVKSTKDSGTIAGLNVLRIINEPTAAAIAYG 160 (1023)
Q Consensus 81 ~~~~~~~v~a~~L~~~~~~~~~l~~~a~~~~~~~~~~~vitVPa~~~~~qr~~l~~Aa~~AGl~~~~li~Ep~AAal~y~ 160 (1023)
..|+.+++.||+| .+.+..|+.+...+|+++|||||.||++.||+++.+||++||++++.||+|.+|||+.|+
T Consensus 131 ~~ysvEellAMil-------~~a~~~ae~~a~~~Ikd~ViTVP~~F~qaeR~all~Aa~iagl~vLqLind~~a~Al~yg 203 (902)
T KOG0104|consen 131 EEYSVEELLAMIL-------QYAKSLAEEYAKQPIKDMVITVPPFFNQAERRALLQAAQIAGLNVLQLINDGTAVALNYG 203 (902)
T ss_pred cccCHHHHHHHHH-------HHHHHHHHHHHhcchhheEEeCCcccCHHHHHHHHHHHHhcCchhhhhhccchHHHhhhh
Confidence 5789999999999 999999999999999999999999999999999999999999999999999999999999
Q ss_pred cccccCccccccCCCCCcEEEEEEeCCceEEEEEEEEe----------CCEEEEEEecCCCCccHHHHHHHHHHHHHHHH
Q psy6736 161 LDKKVGSTAVEYNGSGERNVLIFDLGGGTFDVSILTIE----------DGIFEVKSTAGDTHLGGEDFDNRMVNHFVQEF 230 (1023)
Q Consensus 161 ~~~~~~~~~~~~~~~~~~~vlV~D~GggT~dvsv~~~~----------~~~~~v~~~~~~~~lGG~~~D~~l~~~l~~~~ 230 (1023)
+.+.... ...+++++|||||+|+|.++++.+. ...+++++.++|..+||..|..+|.+||...|
T Consensus 204 v~rRk~i------~~~~q~~i~YDMGs~sT~Ativsy~~v~~k~~g~~~p~i~~~gvGfd~tLGG~e~~~rLr~~l~~~F 277 (902)
T KOG0104|consen 204 VFRRKEI------NETPQHYIFYDMGSGSTSATIVSYQLVKTKEQGGKQPQIQVLGVGFDRTLGGLEMTMRLRDHLANEF 277 (902)
T ss_pred hhccccC------CCCceEEEEEecCCCceeEEEEEEEeeccccccCccceEEEEeeccCCccchHHHHHHHHHHHHHHH
Confidence 9875332 2378999999999999999999984 25899999999999999999999999999999
Q ss_pred Hhhhcc--CccccHHHHHHHHHHHHHHhHHcCCCCceEEEEecccCCceeEEEecHHHHHHHhHHHHHHHHHHHHHHHHH
Q psy6736 231 KRKYKK--DLTTNKRALRRLRTACERAKRTLSSSTQASIEIDSLFEGVDFYTSITRARFEELNADLFRGTMEPVEKSLRD 308 (1023)
Q Consensus 231 ~~~~~~--~~~~~~~~~~~L~~~ae~~K~~Ls~~~~~~i~i~~~~~~~~~~~~itr~~~e~~~~~~~~~i~~~i~~~l~~ 308 (1023)
.+.++. ++..++|++.+|.++|+++|..||+|.++.+.|+++++++||+.+|||++||++|+++..++..||.++|..
T Consensus 278 ~~~~k~~~dv~~nprAmaKl~keA~R~K~vLSANsea~aqIEsL~ddiDFr~kvTRe~fEelc~Dl~~r~~~Pi~dAl~~ 357 (902)
T KOG0104|consen 278 NEQHKTKKDVHTNPRAMAKLNKEAERLKQVLSANSEAFAQIESLIDDIDFRLKVTREEFEELCADLEERIVEPINDALKK 357 (902)
T ss_pred HHhcCCccccccCHHHHHHHHHHHHHHHHHhhcchhhHHHHHHHhhccccccceeHHHHHHHHHHHHHhhhhhHHHHHHh
Confidence 987764 678899999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCCccCcCeEEEEcCCCCcHHHHHHHHHHcCCccccccCCCchhHHhHHHHHHHHHhCCCCcceeeeEEeeeccccceE
Q psy6736 309 AKMDKAQIHDIVLVGGSTRIPKVQKLLQDFFNGKELNKSINPDEAVAYGAAVQAAILHGDKSEEVQDLLLLDVTPLSLGI 388 (1023)
Q Consensus 309 ~~~~~~~i~~V~LvGG~sr~p~v~~~l~~~f~~~~i~~~~~pd~aVa~GAa~~a~~l~~~~~~~~~~~~~~d~~~~sigi 388 (1023)
++++..+|+.|+|.||++|+|.||+.|.++.+..++..++|.|||+++||+++||.|+. +|+++++.+.|.++|+|-+
T Consensus 358 a~l~ldeIn~ViL~Gg~TRVP~VQe~l~k~v~~~ei~knlNaDEA~vmGav~~aA~LSk--sFKvKpf~V~D~~~yp~~v 435 (902)
T KOG0104|consen 358 AQLSLDEINQVILFGGATRVPKVQETLIKAVGKEELGKNLNADEAAVMGAVYQAAHLSK--SFKVKPFNVVDASVYPYLV 435 (902)
T ss_pred cCCChhhhheeEEecCcccCchHHHHHHHHHhHHHHhcccChhHHHHHHHHHHHHhhcc--cccccceeeeecccccEEE
Confidence 99999999999999999999999999999998889999999999999999999999997 8999999999999999988
Q ss_pred EecCc--------eEEEEEecCCCCCCceEEEEEeccCCCCcEEEEEeecCccccccCceeeEEEecCCCCCC----C--
Q psy6736 389 ETAGG--------VMTALIKRNTTIPTKQTQTFTTYSDNQPGVLIQVYEGERAMTKDNNLLGKFELTSIPPAP----R-- 454 (1023)
Q Consensus 389 ~~~~~--------~~~~ii~~~t~ip~~~~~~~~~~~d~q~~~~i~i~~g~~~~~~~~~~lg~~~i~~~~~~~----~-- 454 (1023)
+..+. .-..+|++|.++|..+..+|+.++|+ +.+.+-.|.-. .-+..++++++...- .
T Consensus 436 ~f~~~~~i~~~k~~~~~lf~~~~~yPnk~vi~~~~ysdd---f~~~~n~~~~~-----~nl~~velsgV~d~~kk~~~~~ 507 (902)
T KOG0104|consen 436 EFETEPGIHALKSVKRDLFARMSPYPNKKVITFTSYSDD---FPFNINYGDLG-----QNLTTVELSGVKDALKKNSYSD 507 (902)
T ss_pred EeccCCcccccchhHHHHHhcCCcCCCcceeeccccCCc---cccccchhhhc-----cCccEEEEecchHHHHhcccch
Confidence 65432 22358999999999998888877665 33333222110 234477777765432 1
Q ss_pred -CCCeEEEEEEEcCCcceEEEEEec---------------------cC-----------------------Cc--c----
Q psy6736 455 -GVPQIEVTFDIDANGILNVTAIEK---------------------ST-----------------------GK--E---- 483 (1023)
Q Consensus 455 -g~~~i~v~f~~d~~g~l~v~~~~~---------------------~t-----------------------~~--~---- 483 (1023)
....|+++|.+|.+|++.|+..+. +| ++ +
T Consensus 508 ~~~KGIk~~F~~D~Sgi~~v~~~evv~e~~~~~d~~~~~st~~K~~~~~e~e~~~~~~~~~e~ae~k~~ep~e~se~~ee 587 (902)
T KOG0104|consen 508 SESKGIKASFSLDLSGIVLVSRVEVVFEKQKEEDSGDKKSTLSKLGSTSEGEETSDDSVQEEDAEEKGLEPSERSELEEE 587 (902)
T ss_pred hhccCceEEEEEcCcCceEEeeeeEEEeccCCcccchhhhhhhccccccccccccccccchhhhhhhccCcccccccccc
Confidence 134699999999999998864320 00 00 0
Q ss_pred --------------------------------eeEEEecC---CCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHH
Q psy6736 484 --------------------------------NKITITND---RGRLSKEDIERMVNDAEKYKAEDEKQKAVISAKNSLE 528 (1023)
Q Consensus 484 --------------------------------~~~~i~~~---~~~ls~~~~~~~~~~~~~~~~~d~~~~~~~~a~N~lE 528 (1023)
..+.|+.. ...|....+.....+++.+.++|+.+.++++|.|.||
T Consensus 588 ~~~d~s~e~k~e~~t~e~~~~~~~~~~~~p~~~~~~i~~~~~~~~~l~~~~~~~~~~kl~d~~~~e~~k~~re~a~N~LE 667 (902)
T KOG0104|consen 588 AEEDASQEDKTEKETSEAQKPTEKKETPAPMVVRLQIQETYPDLPVLNENALDAAVAKLEDFVQKEKEKSEREEASNELE 667 (902)
T ss_pred ccccccccccccccchhccCcchhhcccCcceeEeeeeeecccccCCchhHHHHHHHHHHHHHHhhhhHHHHHHHHHHHH
Confidence 01333322 2358899999999999999999999999999999999
Q ss_pred HHHHHHHhhhhhhhhhccCCHHHHHHHHHhhHHHHHHHhhCC-ccCHHHHHHHHHHHHHHHHHHHHHHHcccC
Q psy6736 529 SYCFNMKSTVEDEKLKDKISDAERTQILDKCNDVIKWLDANQ-LAEKEEFEHKQKELEAICNPIITKLYQGSG 600 (1023)
Q Consensus 529 ~~iy~~~~~l~~~~~~~~~~~~e~~~l~~~l~~~~~WL~~~~-~a~~~~~~~kl~~L~~~~~pi~~r~~e~~g 600 (1023)
.|+|++.+.|++++|..+++++|++.|++.+....+||+++. +..++.|.+++.+|++++..+..|..++..
T Consensus 668 ~~l~e~q~~l~d~ey~e~at~EEk~~L~~~~~~~~~Wleed~~~~~t~~~~ek~a~L~~l~~~~~~R~ee~kq 740 (902)
T KOG0104|consen 668 AFLFELQDKLDDDEYAEVATEEEKKILKKKVSLLMDWLEEDGSQTPTEMLTEKLAELKKLETSKNFREEERKQ 740 (902)
T ss_pred HHHHHHHHHhcCchHhhhcCHHHHHHHHHHHHHHHHHHHhhccccchhHHHHHHHHHHHHHhhhhHHHHHHHh
Confidence 999999999999999999999999999999999999998874 788999999999999999999999988764
No 21
>PTZ00186 heat shock 70 kDa precursor protein; Provisional
Probab=100.00 E-value=1.9e-60 Score=568.75 Aligned_cols=357 Identities=48% Similarity=0.792 Sum_probs=334.9
Q ss_pred CcceEEEEEeCCceEEEEEEEEeCCEEEEEEecCCCCCcHHHHHHHHHHHHHHHHHhhhccCcchhHHHHHHHHHHHHHH
Q psy6736 633 GERNVLIFDLGGGTFDVSILTIEDGIFEVKSTAGDTHLGGEDFDNRMVNHFVQEFKRKYKKDLTTNKRALRRLRTACERA 712 (1023)
Q Consensus 633 ~~~~vlV~D~GggT~dvsi~~~~~~~~~v~~~~gd~~lGG~~~D~~l~~~~~~~~~~~~~~~~~~~~~~~~~L~~~~e~~ 712 (1023)
.++++|||||||||||+||+++.++.++|+++.||.+|||+|||.+|++|++++|..+++.++..+++++.+|+.+||++
T Consensus 210 ~~~~vlV~DlGGGT~DvSil~~~~g~~~V~at~Gd~~LGG~DfD~~l~~~~~~~f~~~~~~d~~~~~~~~~rL~~~aEka 289 (657)
T PTZ00186 210 KDSLIAVYDLGGGTFDISVLEIAGGVFEVKATNGDTHLGGEDFDLALSDYILEEFRKTSGIDLSKERMALQRVREAAEKA 289 (657)
T ss_pred CCCEEEEEECCCCeEEEEEEEEeCCEEEEEEecCCCCCCchhHHHHHHHHHHHHHhhhcCCCcccCHHHHHHHHHHHHHH
Confidence 46789999999999999999999999999999999999999999999999999999999888888899999999999999
Q ss_pred hhhcCCCceeEEEEecccCC----cceEEEecHHHHHHHHHHHHHHHHHHHHHHHHHcCCCccccceEEEecCccCcHHH
Q psy6736 713 KRTLSSSTQASIEIDSLFEG----VDFYTSITRARFEELNADLFRGTMEPVEKSLRDAKMDKAQIHDIVLVGGSTRIPKV 788 (1023)
Q Consensus 713 K~~Ls~~~~~~~~i~~~~~~----~~~~~~itr~~~~~~~~~~~~~~~~~i~~~l~~~~~~~~~i~~V~LvGG~srip~v 788 (1023)
|+.||.+.++.+.++.+..+ .++.++|||++|+++++|++++++.+++++|+++++++.+|+.|+||||+||||.|
T Consensus 290 K~~LS~~~~~~i~i~~i~~~~~g~~~~~~~ItR~efe~l~~~l~~r~~~~v~~~L~~a~~~~~dId~VvLVGGssriP~V 369 (657)
T PTZ00186 290 KCELSSAMETEVNLPFITANADGAQHIQMHISRSKFEGITQRLIERSIAPCKQCMKDAGVELKEINDVVLVGGMTRMPKV 369 (657)
T ss_pred HHHhCCCCceEEEEeeeccCCCCCcceEEEecHHHHHHHHHHHHHHHHHHHHHHHHHcCCChhhCCEEEEECCcccChHH
Confidence 99999999999988865432 45889999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhhcCcccCCCCCCccceecchHHHHHHHhCCCcccccceEEeeccceeeEEEeeCceeEEeecCCCCCCcceEE
Q psy6736 789 QKLLQDFFNGKELNKSINPDEAVAYGAAVQAAILHGDKSEEVQDLLLLDVTPLSLGIETAGGVMTALIKRNTTIPTKQTQ 868 (1023)
Q Consensus 789 ~~~l~~~f~~~~~~~~~~p~~aVa~GAa~~a~~l~~~~~~~~~~~~~~d~~~~sigi~~~~~~~~~ii~~~~~lP~~~~~ 868 (1023)
+++|+++|+ ..+...+|||+|||+|||++|+++++. ++++.+.|++|++||+++.+|.|.+|||||++||++++.
T Consensus 370 ~~~l~~~fg-~~~~~~~nPdeaVA~GAAi~a~~l~~~----~~~~~l~Dv~p~slgie~~~g~~~~iI~rnt~iP~~~~~ 444 (657)
T PTZ00186 370 VEEVKKFFQ-KDPFRGVNPDEAVALGAATLGGVLRGD----VKGLVLLDVTPLSLGIETLGGVFTRMIPKNTTIPTKKSQ 444 (657)
T ss_pred HHHHHHHhC-CCccccCCCchHHHHhHHHHHHHhccc----cCceEEEeeccccccceecCCEEEEEEeCCCEeeEEEee
Confidence 999999995 556688999999999999999999863 467899999999999999999999999999999999999
Q ss_pred EEEeecCCCCcEEEEEeecCccccccCceeeEEEEecCCCCCCCCCeEEEEEEECCCccEEEEEEEcccCceeeEEeccc
Q psy6736 869 TFTTYSDNQPGVLIQVYEGERAMTKDNNLLGKFELTSIPPAPRGVPQIEVTFDIDANGILNVTAIEKSTGKENKITITND 948 (1023)
Q Consensus 869 ~f~~~~~~q~~i~i~iyeg~~~~~~~~~~ig~~~l~~~~~~~~g~~~i~v~f~id~~gil~V~a~~~~~~~~~~~~~~~~ 948 (1023)
.|++..|+|+.+.|.||||++....+|..||+|.|.++|+.|+|.++|+|+|++|.||+|+|++.+..||++..++|..
T Consensus 445 ~f~t~~dnQ~~v~i~i~qGe~~~~~~n~~lg~~~l~~ip~~~~G~~~I~Vtf~iD~nGiL~V~a~d~~tg~~~~~~i~~- 523 (657)
T PTZ00186 445 TFSTAADNQTQVGIKVFQGEREMAADNQMMGQFDLVGIPPAPRGVPQIEVTFDIDANGICHVTAKDKATGKTQNITITA- 523 (657)
T ss_pred ccccccCCCceEEEEEEEecccccccccccceEEEcCCCCCCCCCCcEEEEEEEcCCCEEEEEEEEccCCcEEEEEecc-
Confidence 9999999999999999999999999999999999999999999999999999999999999999999999977665542
Q ss_pred cccccccccccccccCcccceEEeeCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHhhcc
Q psy6736 949 RGRRYLNVTAIEKSTGKENKITITNDRGRLSKEDIERMVNDAEKYKAEDEKQKAVISAKNSLESYCFNMKSKG 1021 (1023)
Q Consensus 949 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ls~eei~~~~~~~~~~~~~d~~~~~~~~akN~lE~~iy~~r~k~ 1021 (1023)
..+||+++++++.++.++++.+|+..++..+++|++|+++|.++..+
T Consensus 524 --------------------------~~~ls~~~i~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~ 570 (657)
T PTZ00186 524 --------------------------NGGLSKEQIEQMIRDSEQHAEADRVKRELVEVRNNAETQLTTAERQL 570 (657)
T ss_pred --------------------------CccCCHHHHHHHHHHHHhhhhhhHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 23699999999999999999999999999999999999999998765
No 22
>KOG0101|consensus
Probab=100.00 E-value=2.4e-61 Score=546.60 Aligned_cols=365 Identities=84% Similarity=1.222 Sum_probs=352.3
Q ss_pred CCCcceEEEEEeCCceEEEEEEEEeCCEEEEEEecCCCCCcHHHHHHHHHHHHHHHHHhhhccCcchhHHHHHHHHHHHH
Q psy6736 631 GSGERNVLIFDLGGGTFDVSILTIEDGIFEVKSTAGDTHLGGEDFDNRMVNHFVQEFKRKYKKDLTTNKRALRRLRTACE 710 (1023)
Q Consensus 631 ~~~~~~vlV~D~GggT~dvsi~~~~~~~~~v~~~~gd~~lGG~~~D~~l~~~~~~~~~~~~~~~~~~~~~~~~~L~~~~e 710 (1023)
...+.+|||||+||||||+|++.+.+|.+.|.++.||.+|||.+||+.|++|+..+|+.+++.++..+++++.+|+.+||
T Consensus 193 ~~~~~~VlI~DlGggtfdvs~l~i~gG~~~vkat~gd~~lGGedf~~~l~~h~~~ef~~k~~~d~~~n~r~l~rLR~a~E 272 (620)
T KOG0101|consen 193 VLGERNVLIFDLGGGTFDVSVLSLEGGIFEVKATAGDTHLGGEDFDNKLVNHFAAEFKRKAGKDIGGNARALRRLRTACE 272 (620)
T ss_pred ccceeeEEEEEcCCCceeeeeEEeccchhhhhhhcccccccchhhhHHHHHHHHHHHHHhhccccccchHHHHHHHHHHH
Confidence 45678899999999999999999999988999999999999999999999999999999999999999999999999999
Q ss_pred HHhhhcCCCceeEEEEecccCCcceEEEecHHHHHHHHHHHHHHHHHHHHHHHHHcCCCccccceEEEecCccCcHHHHH
Q psy6736 711 RAKRTLSSSTQASIEIDSLFEGVDFYTSITRARFEELNADLFRGTMEPVEKSLRDAKMDKAQIHDIVLVGGSTRIPKVQK 790 (1023)
Q Consensus 711 ~~K~~Ls~~~~~~~~i~~~~~~~~~~~~itr~~~~~~~~~~~~~~~~~i~~~l~~~~~~~~~i~~V~LvGG~srip~v~~ 790 (1023)
++|+.||...++++.++++++|.++..+|||.+|++++.+++.+++.++..+|+++++++.+|+.|+|||||||+|.++.
T Consensus 273 ~aKr~LS~~~~~~i~vdsL~~g~d~~~~itrarfe~l~~dlf~~~~~~v~~~L~da~~dk~~i~~vvlVGGstriPk~~~ 352 (620)
T KOG0101|consen 273 RAKRTLSSSTQASIEIDSLYEGIDFYTSITRARFEELNADLFRSTLEPVEKALKDAKLDKSDIDEVVLVGGSTRIPKVQK 352 (620)
T ss_pred HHHhhhcccccceeccchhhccccccceeehhhhhhhhhHHHHHHHHHHHHHHHhhccCccCCceeEEecCcccchHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHhhcCcccCCCCCCccceecchHHHHHHHhCCCcccccceEEeeccceeeEEEeeCceeEEeecCCCCCCcceEEEE
Q psy6736 791 LLQDFFNGKELNKSINPDEAVAYGAAVQAAILHGDKSEEVQDLLLLDVTPLSLGIETAGGVMTALIKRNTTIPTKQTQTF 870 (1023)
Q Consensus 791 ~l~~~f~~~~~~~~~~p~~aVa~GAa~~a~~l~~~~~~~~~~~~~~d~~~~sigi~~~~~~~~~ii~~~~~lP~~~~~~f 870 (1023)
.++++|+++.+..++||||+||+|||++||.+++.....+.++++.|+.|.++||++.++.|.++|++||++|++++++|
T Consensus 353 ll~d~f~~k~~~~sinpDeavA~GAavqaa~~~g~~~~~~~~l~lid~~pl~~gve~a~~~~~~~i~~~t~~P~~k~~~f 432 (620)
T KOG0101|consen 353 LLEDFFNGKELNKSINPDEAVAYGAAVQAAILSGDKSLNIQDLLLIDVAPLSLGVETAGGVFTVLIPRNTSIPTKKTQTF 432 (620)
T ss_pred HHHHHhcccccccCCCHHHHHHhhHHHHhhhccCCccccccceeeeecccccccccccCCcceeeeecccccceeeeeee
Confidence 99999988889999999999999999999999998887789999999999999999999999999999999999999999
Q ss_pred EeecCCCCcEEEEEeecCccccccCceeeEEEEecCCCCCCCCCeEEEEEEECCCccEEEEEEEcccCceeeEEeccccc
Q psy6736 871 TTYSDNQPGVLIQVYEGERAMTKDNNLLGKFELTSIPPAPRGVPQIEVTFDIDANGILNVTAIEKSTGKENKITITNDRG 950 (1023)
Q Consensus 871 ~~~~~~q~~i~i~iyeg~~~~~~~~~~ig~~~l~~~~~~~~g~~~i~v~f~id~~gil~V~a~~~~~~~~~~~~~~~~~~ 950 (1023)
++..|||+.+.|.||||++...++|..+|.|.|.++||+|.|.+.|+++|.+|.||+|+|+|.++.||+.+++
T Consensus 433 tt~~dnQp~V~I~VyEger~~~kdn~~lg~feL~gippaprgvp~IevtfdiD~ngiL~Vta~d~stgK~~~i------- 505 (620)
T KOG0101|consen 433 TTYSDNQPGVLIQVYEGERAMTKDNNLLGKFELTGIPPAPRGVPQIEVTFDIDANGILNVTAVDKSTGKENKI------- 505 (620)
T ss_pred eeecCCCCceeEEEEeccccccccccccceeeecCCCccccCCcceeEEEecCCCcEEEEeeccccCCccceE-------
Confidence 9999999999999999999999999999999999999999999999999999999999999999999987654
Q ss_pred cccccccccccccCcccceEEeeCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHhhcc
Q psy6736 951 RRYLNVTAIEKSTGKENKITITNDRGRLSKEDIERMVNDAEKYKAEDEKQKAVISAKNSLESYCFNMKSKG 1021 (1023)
Q Consensus 951 ~~~~~~~~~~~~~~~~~~~~~~~~~~~ls~eei~~~~~~~~~~~~~d~~~~~~~~akN~lE~~iy~~r~k~ 1021 (1023)
+|+++.++||.++|++|....++++.+|+..+.+..++|.||+|+|+++.-+
T Consensus 506 -------------------~i~n~~grls~~~Ierm~~ea~~~~~~d~~~~~~v~~~~~le~~~f~~~~~~ 557 (620)
T KOG0101|consen 506 -------------------TITNDKGRLSKEEIERMVQEAEKYKAEDEKQKDKVAAKNSLESYAFNMKATV 557 (620)
T ss_pred -------------------EEecccceeehhhhhhhhhhhhhccccCHHHHHHHHHHhhHHHHHHhhhhhh
Confidence 4556678899999999999999999999999999999999999999999764
No 23
>PRK13410 molecular chaperone DnaK; Provisional
Probab=100.00 E-value=1.7e-59 Score=563.51 Aligned_cols=358 Identities=47% Similarity=0.799 Sum_probs=334.3
Q ss_pred CcceEEEEEeCCceEEEEEEEEeCCEEEEEEecCCCCCcHHHHHHHHHHHHHHHHHhhhccCcchhHHHHHHHHHHHHHH
Q psy6736 633 GERNVLIFDLGGGTFDVSILTIEDGIFEVKSTAGDTHLGGEDFDNRMVNHFVQEFKRKYKKDLTTNKRALRRLRTACERA 712 (1023)
Q Consensus 633 ~~~~vlV~D~GggT~dvsi~~~~~~~~~v~~~~gd~~lGG~~~D~~l~~~~~~~~~~~~~~~~~~~~~~~~~L~~~~e~~ 712 (1023)
.++++|||||||||||+||+++.++.++|+++.||.+|||++||.+|++|+.++|..+++.++..+++++.+|+.+||++
T Consensus 185 ~~~~vlV~DlGgGT~Dvsv~~~~~g~~~V~at~gd~~lGG~dfD~~l~~~l~~~f~~~~~~d~~~~~~a~~rL~~~aEka 264 (668)
T PRK13410 185 SSQTVLVFDLGGGTFDVSLLEVGNGVFEVKATSGDTQLGGNDFDKRIVDWLAEQFLEKEGIDLRRDRQALQRLTEAAEKA 264 (668)
T ss_pred CCCEEEEEECCCCeEEEEEEEEcCCeEEEEEeecCCCCChhHHHHHHHHHHHHHHHhhhCCCcccCHHHHHHHHHHHHHH
Confidence 46789999999999999999999999999999999999999999999999999999888888888899999999999999
Q ss_pred hhhcCCCceeEEEEecccCC----cceEEEecHHHHHHHHHHHHHHHHHHHHHHHHHcCCCccccceEEEecCccCcHHH
Q psy6736 713 KRTLSSSTQASIEIDSLFEG----VDFYTSITRARFEELNADLFRGTMEPVEKSLRDAKMDKAQIHDIVLVGGSTRIPKV 788 (1023)
Q Consensus 713 K~~Ls~~~~~~~~i~~~~~~----~~~~~~itr~~~~~~~~~~~~~~~~~i~~~l~~~~~~~~~i~~V~LvGG~srip~v 788 (1023)
|+.||.+..+.+.++.+..+ .++...|||++|+++|+++++++..+|+++|+++++++++|+.|+||||+||||+|
T Consensus 265 K~~LS~~~~~~i~i~~~~~~~~g~~~~~~~itR~~FE~l~~~l~~r~~~~i~~~L~~ag~~~~dId~VvLVGGssRiP~V 344 (668)
T PRK13410 265 KIELSGVSVTDISLPFITATEDGPKHIETRLDRKQFESLCGDLLDRLLRPVKRALKDAGLSPEDIDEVVLVGGSTRMPMV 344 (668)
T ss_pred HHhcCCCCceEEEEeeeecCCCCCeeEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHcCCChhhCcEEEEECCccccHHH
Confidence 99999999999998876543 46788999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhhcCcccCCCCCCccceecchHHHHHHHhCCCcccccceEEeeccceeeEEEeeCceeEEeecCCCCCCcceEE
Q psy6736 789 QKLLQDFFNGKELNKSINPDEAVAYGAAVQAAILHGDKSEEVQDLLLLDVTPLSLGIETAGGVMTALIKRNTTIPTKQTQ 868 (1023)
Q Consensus 789 ~~~l~~~f~~~~~~~~~~p~~aVa~GAa~~a~~l~~~~~~~~~~~~~~d~~~~sigi~~~~~~~~~ii~~~~~lP~~~~~ 868 (1023)
+++|+++| +..+...+|||+|||+|||++|+++++ .++++.+.|++|++||+++.+|.+.+|||+|+++|++++.
T Consensus 345 ~~~l~~~f-g~~~~~~~npdeaVA~GAAi~aa~ls~----~~~~~~l~Dv~p~slgie~~~g~~~~li~rnt~iP~~~~~ 419 (668)
T PRK13410 345 QQLVRTLI-PREPNQNVNPDEVVAVGAAIQAGILAG----ELKDLLLLDVTPLSLGLETIGGVMKKLIPRNTTIPVRRSD 419 (668)
T ss_pred HHHHHHHc-CCCcccCCCCchHHHHhHHHHHHhhcc----cccceeEEeeccccccceecCCeeEEEEeCCCcccccccc
Confidence 99999999 466788899999999999999999986 3568999999999999999999999999999999999999
Q ss_pred EEEeecCCCCcEEEEEeecCccccccCceeeEEEEecCCCCCCCCCeEEEEEEECCCccEEEEEEEcccCceeeEEeccc
Q psy6736 869 TFTTYSDNQPGVLIQVYEGERAMTKDNNLLGKFELTSIPPAPRGVPQIEVTFDIDANGILNVTAIEKSTGKENKITITND 948 (1023)
Q Consensus 869 ~f~~~~~~q~~i~i~iyeg~~~~~~~~~~ig~~~l~~~~~~~~g~~~i~v~f~id~~gil~V~a~~~~~~~~~~~~~~~~ 948 (1023)
.|++..++|+.+.|.||||++....+|..||+|.|.++|+.++|.++|+|+|++|.||+|+|++.+..||++..+.
T Consensus 420 ~f~t~~dnq~~v~i~v~qGe~~~~~~n~~lg~~~l~~i~~~~~g~~~I~v~f~id~nGiL~V~a~d~~tg~~~~~~---- 495 (668)
T PRK13410 420 VFSTSENNQSSVEIHVWQGEREMASDNKSLGRFKLSGIPPAPRGVPQVQVAFDIDANGILQVSATDRTTGREQSVT---- 495 (668)
T ss_pred cceeccCCCcEEEEEEEeeccccccCCceEEEEEEeCCCCCCCCCCeEEEEEEECCCcEEEEEEEEcCCCceeeee----
Confidence 9999999999999999999999999999999999999999999999999999999999999999998887654333
Q ss_pred cccccccccccccccCcccceEEeeCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHhhccC
Q psy6736 949 RGRRYLNVTAIEKSTGKENKITITNDRGRLSKEDIERMVNDAEKYKAEDEKQKAVISAKNSLESYCFNMKSKGR 1022 (1023)
Q Consensus 949 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ls~eei~~~~~~~~~~~~~d~~~~~~~~akN~lE~~iy~~r~k~~ 1022 (1023)
+.. ..+||+++++++++++.+|..+|+.++++.++||+||+|||.+|+++.
T Consensus 496 ----------------------i~~-~~~ls~~ei~~~~~~~~~~~~~d~~~~~~~e~kn~~e~~i~~~~~~l~ 546 (668)
T PRK13410 496 ----------------------IQG-ASTLSEQEVNRMIQEAEAKADEDRRRRERIEKRNRALTLIAQAERRLR 546 (668)
T ss_pred ----------------------ecc-cccCCHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 222 246999999999999999999999999999999999999999999874
No 24
>PRK13411 molecular chaperone DnaK; Provisional
Probab=100.00 E-value=5.1e-59 Score=561.74 Aligned_cols=359 Identities=55% Similarity=0.861 Sum_probs=335.1
Q ss_pred CCcceEEEEEeCCceEEEEEEEEeCCEEEEEEecCCCCCcHHHHHHHHHHHHHHHHHhhhccCcchhHHHHHHHHHHHHH
Q psy6736 632 SGERNVLIFDLGGGTFDVSILTIEDGIFEVKSTAGDTHLGGEDFDNRMVNHFVQEFKRKYKKDLTTNKRALRRLRTACER 711 (1023)
Q Consensus 632 ~~~~~vlV~D~GggT~dvsi~~~~~~~~~v~~~~gd~~lGG~~~D~~l~~~~~~~~~~~~~~~~~~~~~~~~~L~~~~e~ 711 (1023)
..++++|||||||||||+||+++.++.++|++++||.+|||++||.+|++|+.++|..+++.++..+++++.+|+.+||+
T Consensus 183 ~~~~~vlV~DlGgGT~dvsi~~~~~~~~~V~at~gd~~LGG~dfD~~l~~~l~~~f~~~~~~d~~~~~~~~~rL~~~aE~ 262 (653)
T PRK13411 183 DQEQLILVFDLGGGTFDVSILQLGDGVFEVKATAGNNHLGGDDFDNCIVDWLVENFQQQEGIDLSQDKMALQRLREAAEK 262 (653)
T ss_pred CCCCEEEEEEcCCCeEEEEEEEEeCCEEEEEEEecCCCcCHHHHHHHHHHHHHHHHHHhhCCCcccCHHHHHHHHHHHHH
Confidence 34678999999999999999999999999999999999999999999999999999988888888889999999999999
Q ss_pred HhhhcCCCceeEEEEecccC----CcceEEEecHHHHHHHHHHHHHHHHHHHHHHHHHcCCCccccceEEEecCccCcHH
Q psy6736 712 AKRTLSSSTQASIEIDSLFE----GVDFYTSITRARFEELNADLFRGTMEPVEKSLRDAKMDKAQIHDIVLVGGSTRIPK 787 (1023)
Q Consensus 712 ~K~~Ls~~~~~~~~i~~~~~----~~~~~~~itr~~~~~~~~~~~~~~~~~i~~~l~~~~~~~~~i~~V~LvGG~srip~ 787 (1023)
+|+.||.+.++.+.++++.. +.++.+.|||++|+++++|++++++.+++++|+++++.+++|+.|+||||+||||+
T Consensus 263 aK~~LS~~~~~~i~i~~~~~d~~~~~~~~~~itR~~fe~l~~~l~~~~~~~i~~~L~~a~~~~~~id~ViLvGGssriP~ 342 (653)
T PRK13411 263 AKIELSSMLTTSINLPFITADETGPKHLEMELTRAKFEELTKDLVEATIEPMQQALKDAGLKPEDIDRVILVGGSTRIPA 342 (653)
T ss_pred HHHhcCCCCceEEEEeeeccCCCCCeeEEEEEcHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHCcEEEEECCCCCcch
Confidence 99999999999998887643 35788999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhhcCcccCCCCCCccceecchHHHHHHHhCCCcccccceEEeeccceeeEEEeeCceeEEeecCCCCCCcceE
Q psy6736 788 VQKLLQDFFNGKELNKSINPDEAVAYGAAVQAAILHGDKSEEVQDLLLLDVTPLSLGIETAGGVMTALIKRNTTIPTKQT 867 (1023)
Q Consensus 788 v~~~l~~~f~~~~~~~~~~p~~aVa~GAa~~a~~l~~~~~~~~~~~~~~d~~~~sigi~~~~~~~~~ii~~~~~lP~~~~ 867 (1023)
|+++|+++|++..+..++|||+|||+|||++|+++++. ++++.+.|++|++||++..++.|.+|||+|+++|++++
T Consensus 343 v~~~l~~~f~~~~~~~~~npdeaVA~GAAi~aa~l~~~----~~~~~~~dv~p~slgi~~~~~~~~~ii~r~t~iP~~~~ 418 (653)
T PRK13411 343 VQEAIQKFFGGKQPDRSVNPDEAVALGAAIQAGVLGGE----VKDLLLLDVTPLSLGIETLGEVFTKIIERNTTIPTSKS 418 (653)
T ss_pred HHHHHHHHcCCcCcCCCCCchHHHHHHHHHHHHhhcCC----ccceeeeecccceeeEEecCCceEEEEECCCcccceee
Confidence 99999999977788889999999999999999999763 57889999999999999999999999999999999999
Q ss_pred EEEEeecCCCCcEEEEEeecCccccccCceeeEEEEecCCCCCCCCCeEEEEEEECCCccEEEEEEEcccCceeeEEecc
Q psy6736 868 QTFTTYSDNQPGVLIQVYEGERAMTKDNNLLGKFELTSIPPAPRGVPQIEVTFDIDANGILNVTAIEKSTGKENKITITN 947 (1023)
Q Consensus 868 ~~f~~~~~~q~~i~i~iyeg~~~~~~~~~~ig~~~l~~~~~~~~g~~~i~v~f~id~~gil~V~a~~~~~~~~~~~~~~~ 947 (1023)
..|++..++|+.+.|.||||++....+|..||++.+.++|+.+.|.++|+|+|++|.||+|+|++.+..+|++..+.
T Consensus 419 ~~f~t~~d~q~~v~i~v~~ge~~~~~~n~~lg~~~l~~i~~~~~g~~~i~v~f~id~~Gil~v~a~d~~t~~~~~~~--- 495 (653)
T PRK13411 419 QVFSTATDGQTSVEIHVLQGERAMAKDNKSLGKFLLTGIPPAPRGVPQIEVSFEIDVNGILKVSAQDQGTGREQSIR--- 495 (653)
T ss_pred EEEEeccCCCeEEEEEEEEecCcccccCceeeEEEEcCCCCCCCCCccEEEEEEECCCCeEEEEEeeccCCceEeeE---
Confidence 99999999999999999999999999999999999999999999999999999999999999999988877654332
Q ss_pred ccccccccccccccccCcccceEEeeCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHhhcc
Q psy6736 948 DRGRRYLNVTAIEKSTGKENKITITNDRGRLSKEDIERMVNDAEKYKAEDEKQKAVISAKNSLESYCFNMKSKG 1021 (1023)
Q Consensus 948 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ls~eei~~~~~~~~~~~~~d~~~~~~~~akN~lE~~iy~~r~k~ 1021 (1023)
+.+ ..+||+++++++++++.+|..+|+.++++.++||+||+|||.+|+++
T Consensus 496 -----------------------i~~-~~~ls~~ei~~~~~~~~~~~~~D~~~~~~~eakN~lEs~iy~~r~~l 545 (653)
T PRK13411 496 -----------------------ITN-TGGLSSNEIERMRQEAEKYAEEDRRRKQLIELKNQADSLLYSYESTL 545 (653)
T ss_pred -----------------------Eec-cccchHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 222 24699999999999999999999999999999999999999999987
No 25
>PTZ00009 heat shock 70 kDa protein; Provisional
Probab=100.00 E-value=9.4e-59 Score=560.32 Aligned_cols=364 Identities=78% Similarity=1.172 Sum_probs=340.8
Q ss_pred CcceEEEEEeCCceEEEEEEEEeCCEEEEEEecCCCCCcHHHHHHHHHHHHHHHHHhhh-ccCcchhHHHHHHHHHHHHH
Q psy6736 633 GERNVLIFDLGGGTFDVSILTIEDGIFEVKSTAGDTHLGGEDFDNRMVNHFVQEFKRKY-KKDLTTNKRALRRLRTACER 711 (1023)
Q Consensus 633 ~~~~vlV~D~GggT~dvsi~~~~~~~~~v~~~~gd~~lGG~~~D~~l~~~~~~~~~~~~-~~~~~~~~~~~~~L~~~~e~ 711 (1023)
.++++|||||||||||+||+++.++.++|+++.||.+|||++||.+|++|+.++|..++ +.++..+++++.+|+.+||+
T Consensus 192 ~~~~vlv~D~GggT~dvsv~~~~~~~~~v~a~~gd~~lGG~d~D~~l~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~aEk 271 (653)
T PTZ00009 192 GEKNVLIFDLGGGTFDVSLLTIEDGIFEVKATAGDTHLGGEDFDNRLVEFCVQDFKRKNRGKDLSSNQRALRRLRTQCER 271 (653)
T ss_pred CCCEEEEEECCCCeEEEEEEEEeCCeEEEEEecCCCCCChHHHHHHHHHHHHHHHHHhccCCCCccCHHHHHHHHHHHHH
Confidence 36789999999999999999999999999999999999999999999999999998776 36777788999999999999
Q ss_pred HhhhcCCCceeEEEEecccCCcceEEEecHHHHHHHHHHHHHHHHHHHHHHHHHcCCCccccceEEEecCccCcHHHHHH
Q psy6736 712 AKRTLSSSTQASIEIDSLFEGVDFYTSITRARFEELNADLFRGTMEPVEKSLRDAKMDKAQIHDIVLVGGSTRIPKVQKL 791 (1023)
Q Consensus 712 ~K~~Ls~~~~~~~~i~~~~~~~~~~~~itr~~~~~~~~~~~~~~~~~i~~~l~~~~~~~~~i~~V~LvGG~srip~v~~~ 791 (1023)
+|+.||.+.++.+.+++++++.++.++|||++|+++|+|++++++.+++++|+++++++.+|+.|+||||+||||.|+++
T Consensus 272 aK~~LS~~~~~~i~i~~~~~~~d~~~~itR~~fe~l~~~l~~~~~~~i~~~L~~a~~~~~~i~~ViLvGGssriP~v~~~ 351 (653)
T PTZ00009 272 AKRTLSSSTQATIEIDSLFEGIDYNVTISRARFEELCGDYFRNTLQPVEKVLKDAGMDKRSVHEVVLVGGSTRIPKVQSL 351 (653)
T ss_pred HHHhCCCCceEEEEEEeccCCceEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHCcEEEEECCCCCChhHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHhhcCcccCCCCCCccceecchHHHHHHHhCCCcccccceEEeeccceeeEEEeeCceeEEeecCCCCCCcceEEEEE
Q psy6736 792 LQDFFNGKELNKSINPDEAVAYGAAVQAAILHGDKSEEVQDLLLLDVTPLSLGIETAGGVMTALIKRNTTIPTKQTQTFT 871 (1023)
Q Consensus 792 l~~~f~~~~~~~~~~p~~aVa~GAa~~a~~l~~~~~~~~~~~~~~d~~~~sigi~~~~~~~~~ii~~~~~lP~~~~~~f~ 871 (1023)
|+++|++..+...+|||+|||+|||++|+++++...+.++++.+.|++|++||++..++.+.+|||+|++||++++.+|+
T Consensus 352 i~~~f~~~~~~~~~npdeaVA~GAa~~aa~ls~~~~~~~~~~~~~dv~p~slgi~~~~~~~~~ii~~~t~iP~~~~~~f~ 431 (653)
T PTZ00009 352 IKDFFNGKEPCKSINPDEAVAYGAAVQAAILTGEQSSQVQDLLLLDVTPLSLGLETAGGVMTKLIERNTTIPTKKSQIFT 431 (653)
T ss_pred HHHHhCCCCCCCCCCcchHHhhhhhhhHHHhcCCccccccceEEEeecccccCccccCCceEEEEeCCCcCCccceeEeE
Confidence 99999777788899999999999999999998765567788999999999999999999999999999999999999999
Q ss_pred eecCCCCcEEEEEeecCccccccCceeeEEEEecCCCCCCCCCeEEEEEEECCCccEEEEEEEcccCceeeEEecccccc
Q psy6736 872 TYSDNQPGVLIQVYEGERAMTKDNNLLGKFELTSIPPAPRGVPQIEVTFDIDANGILNVTAIEKSTGKENKITITNDRGR 951 (1023)
Q Consensus 872 ~~~~~q~~i~i~iyeg~~~~~~~~~~ig~~~l~~~~~~~~g~~~i~v~f~id~~gil~V~a~~~~~~~~~~~~~~~~~~~ 951 (1023)
+..++|+.+.|.||||++....+|..||++.+.++|+.++|.+.|+|+|++|.||+|+|++.+..++++..+
T Consensus 432 t~~d~q~~~~i~i~ege~~~~~~n~~lg~~~i~~i~~~~~g~~~i~v~f~id~~Gil~v~~~~~~t~~~~~~-------- 503 (653)
T PTZ00009 432 TYADNQPGVLIQVFEGERAMTKDNNLLGKFHLDGIPPAPRGVPQIEVTFDIDANGILNVSAEDKSTGKSNKI-------- 503 (653)
T ss_pred eecCCCceEEEEEEecccccCCCCceEEEEEEcCCCCCCCCCceEEEEEEECCCCeEEEEEecccCCceeeE--------
Confidence 999999999999999999999999999999999999999998899999999999999999998877765433
Q ss_pred ccccccccccccCcccceEEeeCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHhhccC
Q psy6736 952 RYLNVTAIEKSTGKENKITITNDRGRLSKEDIERMVNDAEKYKAEDEKQKAVISAKNSLESYCFNMKSKGR 1022 (1023)
Q Consensus 952 ~~~~~~~~~~~~~~~~~~~~~~~~~~ls~eei~~~~~~~~~~~~~d~~~~~~~~akN~lE~~iy~~r~k~~ 1022 (1023)
++.....+||.++++++++++.+|..+|+.++++.++||+||+|||.+|+++.
T Consensus 504 ------------------~i~~~~~~ls~~~i~~~~~~~~~~~~~d~~~~~~~eakN~lEs~Iy~~r~~L~ 556 (653)
T PTZ00009 504 ------------------TITNDKGRLSKADIDRMVNEAEKYKAEDEANRERVEAKNGLENYCYSMKNTLQ 556 (653)
T ss_pred ------------------EEeeccccccHHHHHHHHHHHHHHHHHhHHHHHHHHHHhhhHHHHHHHHHHHh
Confidence 33334467999999999999999999999999999999999999999999873
No 26
>PTZ00400 DnaK-type molecular chaperone; Provisional
Probab=100.00 E-value=1.1e-58 Score=558.92 Aligned_cols=358 Identities=54% Similarity=0.885 Sum_probs=333.3
Q ss_pred CCcceEEEEEeCCceEEEEEEEEeCCEEEEEEecCCCCCcHHHHHHHHHHHHHHHHHhhhccCcchhHHHHHHHHHHHHH
Q psy6736 632 SGERNVLIFDLGGGTFDVSILTIEDGIFEVKSTAGDTHLGGEDFDNRMVNHFVQEFKRKYKKDLTTNKRALRRLRTACER 711 (1023)
Q Consensus 632 ~~~~~vlV~D~GggT~dvsi~~~~~~~~~v~~~~gd~~lGG~~~D~~l~~~~~~~~~~~~~~~~~~~~~~~~~L~~~~e~ 711 (1023)
..++++|||||||||||+||+++.++.++|+++.||.+|||++||.+|++|+.++|..+++.++..+++++.+|+.+||+
T Consensus 223 ~~~~~vlV~DlGgGT~DvSv~~~~~g~~~v~a~~gd~~LGG~d~D~~l~~~l~~~f~~~~~~~~~~~~~a~~~L~~~aE~ 302 (663)
T PTZ00400 223 NDGKTIAVYDLGGGTFDISILEILGGVFEVKATNGNTSLGGEDFDQRILNYLIAEFKKQQGIDLKKDKLALQRLREAAET 302 (663)
T ss_pred CCCcEEEEEeCCCCeEEEEEEEecCCeeEEEecccCCCcCHHHHHHHHHHHHHHHhhhhcCCCcccCHHHHHHHHHHHHH
Confidence 34678999999999999999999999999999999999999999999999999999988888888889999999999999
Q ss_pred HhhhcCCCceeEEEEecccCC----cceEEEecHHHHHHHHHHHHHHHHHHHHHHHHHcCCCccccceEEEecCccCcHH
Q psy6736 712 AKRTLSSSTQASIEIDSLFEG----VDFYTSITRARFEELNADLFRGTMEPVEKSLRDAKMDKAQIHDIVLVGGSTRIPK 787 (1023)
Q Consensus 712 ~K~~Ls~~~~~~~~i~~~~~~----~~~~~~itr~~~~~~~~~~~~~~~~~i~~~l~~~~~~~~~i~~V~LvGG~srip~ 787 (1023)
+|+.||.+.++.+.++.+..+ .++.++|||++|+++|+|++++++++++++|+++++++++|+.|+||||+||||+
T Consensus 303 aK~~LS~~~~~~i~i~~~~~d~~g~~~~~~~itR~efe~l~~~l~~~~~~~i~~~L~~a~~~~~~i~~ViLvGGssriP~ 382 (663)
T PTZ00400 303 AKIELSSKTQTEINLPFITADQSGPKHLQIKLSRAKLEELTHDLLKKTIEPCEKCIKDAGVKKDELNDVILVGGMTRMPK 382 (663)
T ss_pred HHHHcCCCCceEEEEEeeccCCCCceEEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHCcEEEEECCccCChH
Confidence 999999999888888866543 4788999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhhcCcccCCCCCCccceecchHHHHHHHhCCCcccccceEEeeccceeeEEEeeCceeEEeecCCCCCCcceE
Q psy6736 788 VQKLLQDFFNGKELNKSINPDEAVAYGAAVQAAILHGDKSEEVQDLLLLDVTPLSLGIETAGGVMTALIKRNTTIPTKQT 867 (1023)
Q Consensus 788 v~~~l~~~f~~~~~~~~~~p~~aVa~GAa~~a~~l~~~~~~~~~~~~~~d~~~~sigi~~~~~~~~~ii~~~~~lP~~~~ 867 (1023)
|+++|+++|+ .++...+|||+|||+|||++|+++++. .+++.+.|++|++||++..+|.|.+|||+|+++|++++
T Consensus 383 v~~~l~~~f~-~~~~~~~npdeaVA~GAAi~aa~l~~~----~~~~~~~dv~p~slgi~~~~g~~~~ii~~~t~iP~~~~ 457 (663)
T PTZ00400 383 VSETVKKIFG-KEPSKGVNPDEAVAMGAAIQAGVLKGE----IKDLLLLDVTPLSLGIETLGGVFTRLINRNTTIPTKKS 457 (663)
T ss_pred HHHHHHHHhC-CCcccCCCCccceeeccHHHHHhhcCC----ccceEEEeccccceEEEecCCeeEEEEecCccCCccce
Confidence 9999999994 567789999999999999999999763 56789999999999999999999999999999999999
Q ss_pred EEEEeecCCCCcEEEEEeecCccccccCceeeEEEEecCCCCCCCCCeEEEEEEECCCccEEEEEEEcccCceeeEEecc
Q psy6736 868 QTFTTYSDNQPGVLIQVYEGERAMTKDNNLLGKFELTSIPPAPRGVPQIEVTFDIDANGILNVTAIEKSTGKENKITITN 947 (1023)
Q Consensus 868 ~~f~~~~~~q~~i~i~iyeg~~~~~~~~~~ig~~~l~~~~~~~~g~~~i~v~f~id~~gil~V~a~~~~~~~~~~~~~~~ 947 (1023)
..|++..|+|+.+.|.||||++....+|..||++.+.++|+.+.|.++|+|+|.+|.||+|+|++.+..+|++..+.+
T Consensus 458 ~~f~~~~d~q~~~~i~i~ege~~~~~~n~~lg~~~i~~i~~~~~g~~~i~v~f~id~~Gil~v~a~~~~~~~~~~~~i-- 535 (663)
T PTZ00400 458 QVFSTAADNQTQVGIKVFQGEREMAADNKLLGQFDLVGIPPAPRGVPQIEVTFDVDANGIMNISAVDKSTGKKQEITI-- 535 (663)
T ss_pred eeeeeccCCCceEEEEEEEecCccCCcCceeEEEEEcCCCCCCCCCceEEEEEEECCCCCEEEEEEeccCCcEEEEEe--
Confidence 999999999999999999999999999999999999999999999999999999999999999999888876544333
Q ss_pred ccccccccccccccccCcccceEEeeCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHhhcc
Q psy6736 948 DRGRRYLNVTAIEKSTGKENKITITNDRGRLSKEDIERMVNDAEKYKAEDEKQKAVISAKNSLESYCFNMKSKG 1021 (1023)
Q Consensus 948 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ls~eei~~~~~~~~~~~~~d~~~~~~~~akN~lE~~iy~~r~k~ 1021 (1023)
+. ..+||+++++++++++.+|..+|+..+++.++||+||+|||.+|+++
T Consensus 536 ------------------------~~-~~~ls~~ei~~~~~~~~~~~~~D~~~~~~~eakN~lEs~iy~~r~~l 584 (663)
T PTZ00400 536 ------------------------QS-SGGLSDEEIEKMVKEAEEYKEQDEKKKELVDAKNEAETLIYSVEKQL 584 (663)
T ss_pred ------------------------ec-cccccHHHHHHHHHHHHhhhhhhhHHHHHHHHHHHHHHHHHHHHHHH
Confidence 22 24699999999999999999999999999999999999999999886
No 27
>PLN03184 chloroplast Hsp70; Provisional
Probab=100.00 E-value=1.6e-58 Score=557.55 Aligned_cols=357 Identities=53% Similarity=0.845 Sum_probs=332.9
Q ss_pred CcceEEEEEeCCceEEEEEEEEeCCEEEEEEecCCCCCcHHHHHHHHHHHHHHHHHhhhccCcchhHHHHHHHHHHHHHH
Q psy6736 633 GERNVLIFDLGGGTFDVSILTIEDGIFEVKSTAGDTHLGGEDFDNRMVNHFVQEFKRKYKKDLTTNKRALRRLRTACERA 712 (1023)
Q Consensus 633 ~~~~vlV~D~GggT~dvsi~~~~~~~~~v~~~~gd~~lGG~~~D~~l~~~~~~~~~~~~~~~~~~~~~~~~~L~~~~e~~ 712 (1023)
.++++|||||||||||+||+++.++.++|+++.||.+|||++||++|++|+.++|..+++.++..+++++.+|+.+||++
T Consensus 222 ~~~~vlV~DlGgGT~DvSi~~~~~~~~eVla~~gd~~LGG~dfD~~L~~~~~~~f~~~~~~d~~~~~~~~~rL~~~aEka 301 (673)
T PLN03184 222 SNETILVFDLGGGTFDVSVLEVGDGVFEVLSTSGDTHLGGDDFDKRIVDWLASNFKKDEGIDLLKDKQALQRLTEAAEKA 301 (673)
T ss_pred CCCEEEEEECCCCeEEEEEEEecCCEEEEEEecCCCccCHHHHHHHHHHHHHHHHHhhcCCCcccCHHHHHHHHHHHHHH
Confidence 45789999999999999999999999999999999999999999999999999999988888888899999999999999
Q ss_pred hhhcCCCceeEEEEecccC----CcceEEEecHHHHHHHHHHHHHHHHHHHHHHHHHcCCCccccceEEEecCccCcHHH
Q psy6736 713 KRTLSSSTQASIEIDSLFE----GVDFYTSITRARFEELNADLFRGTMEPVEKSLRDAKMDKAQIHDIVLVGGSTRIPKV 788 (1023)
Q Consensus 713 K~~Ls~~~~~~~~i~~~~~----~~~~~~~itr~~~~~~~~~~~~~~~~~i~~~l~~~~~~~~~i~~V~LvGG~srip~v 788 (1023)
|+.||.+.++.+.++++.. +.++..+|||++|+++|+++++++..+|+++|+++++++++|+.|+||||+||||.|
T Consensus 302 K~~LS~~~~~~i~i~~~~~~~~g~~~~~~~itR~~fe~l~~~l~~r~~~~i~~~L~~a~~~~~dId~ViLvGGssriP~V 381 (673)
T PLN03184 302 KIELSSLTQTSISLPFITATADGPKHIDTTLTRAKFEELCSDLLDRCKTPVENALRDAKLSFKDIDEVILVGGSTRIPAV 381 (673)
T ss_pred HHhcCCCCcceEEEEeeeccCCCCceEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHcCCChhHccEEEEECCccccHHH
Confidence 9999999999998876542 257889999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhhcCcccCCCCCCccceecchHHHHHHHhCCCcccccceEEeeccceeeEEEeeCceeEEeecCCCCCCcceEE
Q psy6736 789 QKLLQDFFNGKELNKSINPDEAVAYGAAVQAAILHGDKSEEVQDLLLLDVTPLSLGIETAGGVMTALIKRNTTIPTKQTQ 868 (1023)
Q Consensus 789 ~~~l~~~f~~~~~~~~~~p~~aVa~GAa~~a~~l~~~~~~~~~~~~~~d~~~~sigi~~~~~~~~~ii~~~~~lP~~~~~ 868 (1023)
+++|+++| +..+...+|||+|||+|||++|+++++ .++++.+.|++|++||+++.++.+.+|||+|+++|++++.
T Consensus 382 ~~~i~~~f-g~~~~~~~npdeaVA~GAAi~aa~ls~----~~~~~~~~dv~p~slgi~~~~~~~~~ii~r~t~iP~~~~~ 456 (673)
T PLN03184 382 QELVKKLT-GKDPNVTVNPDEVVALGAAVQAGVLAG----EVSDIVLLDVTPLSLGLETLGGVMTKIIPRNTTLPTSKSE 456 (673)
T ss_pred HHHHHHHh-CCCcccccCcchHHHHHHHHHHHHhcc----CccceEEEecccccceEEecCCeeEEEEeCCCccceecce
Confidence 99999999 466778899999999999999999986 3567899999999999999999999999999999999999
Q ss_pred EEEeecCCCCcEEEEEeecCccccccCceeeEEEEecCCCCCCCCCeEEEEEEECCCccEEEEEEEcccCceeeEEeccc
Q psy6736 869 TFTTYSDNQPGVLIQVYEGERAMTKDNNLLGKFELTSIPPAPRGVPQIEVTFDIDANGILNVTAIEKSTGKENKITITND 948 (1023)
Q Consensus 869 ~f~~~~~~q~~i~i~iyeg~~~~~~~~~~ig~~~l~~~~~~~~g~~~i~v~f~id~~gil~V~a~~~~~~~~~~~~~~~~ 948 (1023)
+|++..|+|+.+.|.||||++....+|..||+|.|.++|+.++|.++|+|+|++|.||+|+|++.+..++++..+.+.
T Consensus 457 ~f~t~~d~q~~v~i~i~~ge~~~~~~n~~lg~~~i~~i~~~~~g~~~i~v~f~id~~GiL~V~a~~~~t~~~~~~~i~-- 534 (673)
T PLN03184 457 VFSTAADGQTSVEINVLQGEREFVRDNKSLGSFRLDGIPPAPRGVPQIEVKFDIDANGILSVSATDKGTGKKQDITIT-- 534 (673)
T ss_pred EeeeecCCCcEEEEEEEeecccccccCceEEEEEEeCCCCCCCCCceEEEEEEeCCCCeEEEEEEecCCCeEEEEEec--
Confidence 999999999999999999999999999999999999999999999899999999999999999999888775544332
Q ss_pred cccccccccccccccCcccceEEeeCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHhhcc
Q psy6736 949 RGRRYLNVTAIEKSTGKENKITITNDRGRLSKEDIERMVNDAEKYKAEDEKQKAVISAKNSLESYCFNMKSKG 1021 (1023)
Q Consensus 949 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ls~eei~~~~~~~~~~~~~d~~~~~~~~akN~lE~~iy~~r~k~ 1021 (1023)
. ..+||+++++++++++.+|..+|+..+++.++||+||+|||.+|+++
T Consensus 535 ------------------------~-~~~ls~eei~~~~~~~~~~~~~D~~~~~~~eakN~lE~~iy~~r~~l 582 (673)
T PLN03184 535 ------------------------G-ASTLPKDEVERMVQEAEKFAKEDKEKRDAVDTKNQADSVVYQTEKQL 582 (673)
T ss_pred ------------------------c-cccccHHHHHHHHHHHHHhhhhhHHHHHHHHHHHhHHHHHHHHHHHH
Confidence 2 24699999999999999999999999999999999999999999987
No 28
>KOG0102|consensus
Probab=100.00 E-value=2.3e-59 Score=505.93 Aligned_cols=358 Identities=54% Similarity=0.846 Sum_probs=340.9
Q ss_pred cceEEEEEeCCceEEEEEEEEeCCEEEEEEecCCCCCcHHHHHHHHHHHHHHHHHhhhccCcchhHHHHHHHHHHHHHHh
Q psy6736 634 ERNVLIFDLGGGTFDVSILTIEDGIFEVKSTAGDTHLGGEDFDNRMVNHFVQEFKRKYKKDLTTNKRALRRLRTACERAK 713 (1023)
Q Consensus 634 ~~~vlV~D~GggT~dvsi~~~~~~~~~v~~~~gd~~lGG~~~D~~l~~~~~~~~~~~~~~~~~~~~~~~~~L~~~~e~~K 713 (1023)
+..++|||+||||||+||+++.++.++|.++.||.+|||+|||..+++|+..+|+...+.++..+.++++||++++|++|
T Consensus 211 ~g~iaV~dLgggtfdisilei~~gvfevksTngdtflggedfd~~~~~~~v~~fk~~~gidl~kd~~a~qrl~eaaEkaK 290 (640)
T KOG0102|consen 211 DGVIAVFDLGGGTFDISILEIEDGVFEVKSTNGDTHLGGEDFDNALVRFIVSEFKKEEGIDLTKDRMALQRLREAAEKAK 290 (640)
T ss_pred CCceEEEEcCCceeeeeeehhccceeEEEeccCccccChhHHHHHHHHHHHHhhhcccCcchhhhHHHHHHHHHHHHhhh
Confidence 68899999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhcCCCceeEEEEecccCC----cceEEEecHHHHHHHHHHHHHHHHHHHHHHHHHcCCCccccceEEEecCccCcHHHH
Q psy6736 714 RTLSSSTQASIEIDSLFEG----VDFYTSITRARFEELNADLFRGTMEPVEKSLRDAKMDKAQIHDIVLVGGSTRIPKVQ 789 (1023)
Q Consensus 714 ~~Ls~~~~~~~~i~~~~~~----~~~~~~itr~~~~~~~~~~~~~~~~~i~~~l~~~~~~~~~i~~V~LvGG~srip~v~ 789 (1023)
++||...+..+.++.+..+ ..+++++||.+|++++.++++|+++++.++|++|++..+||+.|+||||.+|||.++
T Consensus 291 ielSs~~~tei~lp~iTada~gpkh~~i~~tr~efe~~v~~lI~Rti~p~~~aL~dA~~~~~di~EV~lvggmtrmpkv~ 370 (640)
T KOG0102|consen 291 IELSSRQQTEINLPFITADASGPKHLNIELTRGEFEELVPSLIARTIEPCKKALRDASLSSSDINEVILVGGMTRMPKVQ 370 (640)
T ss_pred hhhhhcccceeccceeeccCCCCeeEEEeecHHHHHHhhHHHHHhhhhHHHHHHHhccCChhhhhhhhhhcchhhcHHHH
Confidence 9999999999999987765 578999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHhhcCcccCCCCCCccceecchHHHHHHHhCCCcccccceEEeeccceeeEEEeeCceeEEeecCCCCCCcceEEE
Q psy6736 790 KLLQDFFNGKELNKSINPDEAVAYGAAVQAAILHGDKSEEVQDLLLLDVTPLSLGIETAGGVMTALIKRNTTIPTKQTQT 869 (1023)
Q Consensus 790 ~~l~~~f~~~~~~~~~~p~~aVa~GAa~~a~~l~~~~~~~~~~~~~~d~~~~sigi~~~~~~~~~ii~~~~~lP~~~~~~ 869 (1023)
+.+.++| +.......|||++||.|||++++.+.+ .++++.+.|++|.++|+++.+|.|..+||+||.||++++..
T Consensus 371 s~V~e~f-gk~p~~~vnPdeava~GAaiqggvl~g----eVkdvlLLdVtpLsLgietlggvft~Li~rnttIptkksqv 445 (640)
T KOG0102|consen 371 STVKELF-GKGPSKGVNPDEAVAGGAAIQGGVLSG----EVKDVLLLDVTPLSLGIETLGGVFTKLIPRNTTIPTKKSQV 445 (640)
T ss_pred HHHHHHh-CCCCCCCcCCcchhccchhhccchhhc----cccceeeeecchHHHHHHhhhhhheecccCCcccCchhhhh
Confidence 9999999 567788999999999999999999987 57899999999999999999999999999999999999999
Q ss_pred EEeecCCCCcEEEEEeecCccccccCceeeEEEEecCCCCCCCCCeEEEEEEECCCccEEEEEEEcccCceeeEEecccc
Q psy6736 870 FTTYSDNQPGVLIQVYEGERAMTKDNNLLGKFELTSIPPAPRGVPQIEVTFDIDANGILNVTAIEKSTGKENKITITNDR 949 (1023)
Q Consensus 870 f~~~~~~q~~i~i~iyeg~~~~~~~~~~ig~~~l~~~~~~~~g~~~i~v~f~id~~gil~V~a~~~~~~~~~~~~~~~~~ 949 (1023)
|.++.|+|+.+.|+|+||++....+|..+|+|.+.++||.|+|.|+|.|+|.+|.|||++|+|.++.||++..+++..
T Consensus 446 fstaadgqt~V~ikv~qgere~~~dnk~lG~f~l~gipp~pRgvpqieVtfDIdanGI~~vsA~dk~t~K~qsi~i~~-- 523 (640)
T KOG0102|consen 446 FSTAADGQTQVEIKVFQGEREMVNDNKLLGSFILQGIPPAPRGVPQIEVTFDIDANGIGTVSAKDKGTGKSQSITIAS-- 523 (640)
T ss_pred eeecccCCceEEEEeeechhhhhccCcccceeeecccCCCCCCCCceeEEEeecCCceeeeehhhcccCCccceEEee--
Confidence 999999999999999999999999999999999999999999999999999999999999999999999977655443
Q ss_pred ccccccccccccccCcccceEEeeCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHhhccCC
Q psy6736 950 GRRYLNVTAIEKSTGKENKITITNDRGRLSKEDIERMVNDAEKYKAEDEKQKAVISAKNSLESYCFNMKSKGRY 1023 (1023)
Q Consensus 950 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~ls~eei~~~~~~~~~~~~~d~~~~~~~~akN~lE~~iy~~r~k~~~ 1023 (1023)
. ++||+++++.|.++.+.+...|+.++++.+.+|..|+++|.....++|
T Consensus 524 ------------------------s-ggLs~~ei~~mV~eaer~~~~d~~~~~~ie~~nka~s~~~~te~~~~~ 572 (640)
T KOG0102|consen 524 ------------------------S-GGLSKDEIELMVGEAERLASTDKEKREAIETKNKADSIIYDTEKSLKE 572 (640)
T ss_pred ------------------------c-CCCCHHHHHHHHHHHHHHHhhhHHHHHHhhhhcchhheecCchhhhhh
Confidence 2 349999999999999999999999999999999999999987766654
No 29
>CHL00094 dnaK heat shock protein 70
Probab=100.00 E-value=1.7e-57 Score=547.86 Aligned_cols=358 Identities=56% Similarity=0.875 Sum_probs=332.7
Q ss_pred CCcceEEEEEeCCceEEEEEEEEeCCEEEEEEecCCCCCcHHHHHHHHHHHHHHHHHhhhccCcchhHHHHHHHHHHHHH
Q psy6736 632 SGERNVLIFDLGGGTFDVSILTIEDGIFEVKSTAGDTHLGGEDFDNRMVNHFVQEFKRKYKKDLTTNKRALRRLRTACER 711 (1023)
Q Consensus 632 ~~~~~vlV~D~GggT~dvsi~~~~~~~~~v~~~~gd~~lGG~~~D~~l~~~~~~~~~~~~~~~~~~~~~~~~~L~~~~e~ 711 (1023)
+.+.++|||||||||||+||+++.++.++|++++||.++||++||.+|++|+.++|..+++.++..+++++.+|+.+||+
T Consensus 184 ~~~~~vlV~DlGgGT~DvSv~~~~~~~~~vla~~gd~~lGG~d~D~~l~~~~~~~~~~~~~~~~~~~~~~~~~L~~~aE~ 263 (621)
T CHL00094 184 KNNETILVFDLGGGTFDVSILEVGDGVFEVLSTSGDTHLGGDDFDKKIVNWLIKEFKKKEGIDLSKDRQALQRLTEAAEK 263 (621)
T ss_pred CCCCEEEEEEcCCCeEEEEEEEEcCCEEEEEEEecCCCcChHHHHHHHHHHHHHHHHHHhCCCcccCHHHHHHHHHHHHH
Confidence 34578999999999999999999999999999999999999999999999999999999988888889999999999999
Q ss_pred HhhhcCCCceeEEEEecccC----CcceEEEecHHHHHHHHHHHHHHHHHHHHHHHHHcCCCccccceEEEecCccCcHH
Q psy6736 712 AKRTLSSSTQASIEIDSLFE----GVDFYTSITRARFEELNADLFRGTMEPVEKSLRDAKMDKAQIHDIVLVGGSTRIPK 787 (1023)
Q Consensus 712 ~K~~Ls~~~~~~~~i~~~~~----~~~~~~~itr~~~~~~~~~~~~~~~~~i~~~l~~~~~~~~~i~~V~LvGG~srip~ 787 (1023)
+|+.||.+.++.+.++.+.. +.++...|||++|+++++++++++..+|+++|+++++++.+|+.|+||||+||||.
T Consensus 264 aK~~LS~~~~~~i~i~~~~~~~~g~~~~~~~itR~~fe~l~~~l~~~~~~~i~~~L~~a~~~~~~i~~ViLvGGssriP~ 343 (621)
T CHL00094 264 AKIELSNLTQTEINLPFITATQTGPKHIEKTLTRAKFEELCSDLINRCRIPVENALKDAKLDKSDIDEVVLVGGSTRIPA 343 (621)
T ss_pred HHHhcCCCCceEEEEeecccCCCCCeeEEEEEcHHHHHHHHHHHHHHHHHHHHHHHHHcCCChhhCcEEEEECCccCChH
Confidence 99999999988998887643 24688899999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhhcCcccCCCCCCccceecchHHHHHHHhCCCcccccceEEeeccceeeEEEeeCceeEEeecCCCCCCcceE
Q psy6736 788 VQKLLQDFFNGKELNKSINPDEAVAYGAAVQAAILHGDKSEEVQDLLLLDVTPLSLGIETAGGVMTALIKRNTTIPTKQT 867 (1023)
Q Consensus 788 v~~~l~~~f~~~~~~~~~~p~~aVa~GAa~~a~~l~~~~~~~~~~~~~~d~~~~sigi~~~~~~~~~ii~~~~~lP~~~~ 867 (1023)
|++.|+++|+ .++...+|||+|||+|||++|+.+++ ..+++.+.|++|++||++..+|.+.+|||+|+++|++++
T Consensus 344 v~~~l~~~fg-~~~~~~~~pdeava~GAA~~aa~ls~----~~~~~~~~d~~~~~lgi~~~~~~~~~ii~~~t~iP~~~~ 418 (621)
T CHL00094 344 IQELVKKLLG-KKPNQSVNPDEVVAIGAAVQAGVLAG----EVKDILLLDVTPLSLGVETLGGVMTKIIPRNTTIPTKKS 418 (621)
T ss_pred HHHHHHHHhC-CCcCcCCCchhHHHhhhHHHHHHhcC----CccceeeeeeeceeeeeeccCCEEEEEEeCCCccceeee
Confidence 9999999994 66788999999999999999999976 346789999999999999999999999999999999999
Q ss_pred EEEEeecCCCCcEEEEEeecCccccccCceeeEEEEecCCCCCCCCCeEEEEEEECCCccEEEEEEEcccCceeeEEecc
Q psy6736 868 QTFTTYSDNQPGVLIQVYEGERAMTKDNNLLGKFELTSIPPAPRGVPQIEVTFDIDANGILNVTAIEKSTGKENKITITN 947 (1023)
Q Consensus 868 ~~f~~~~~~q~~i~i~iyeg~~~~~~~~~~ig~~~l~~~~~~~~g~~~i~v~f~id~~gil~V~a~~~~~~~~~~~~~~~ 947 (1023)
..|++..++|+.+.|.||||++....+|..||+|.|.++|+.++|.++|+|+|++|.||+|+|++.+..++++..+.
T Consensus 419 ~~~~~~~~~q~~v~i~i~~ge~~~~~~n~~lg~~~i~~~~~~~~g~~~i~v~f~id~~Gil~v~~~~~~t~~~~~~~--- 495 (621)
T CHL00094 419 EVFSTAVDNQTNVEIHVLQGERELAKDNKSLGTFRLDGIPPAPRGVPQIEVTFDIDANGILSVTAKDKGTGKEQSIT--- 495 (621)
T ss_pred EEEEeccCCCcEEEEEEEeeccccCCCCCEEEEEEEeCCCCCCCCCCcEEEEEEECCCCeEEEEEeeccCCceeeee---
Confidence 99999999999999999999999999999999999999999999988999999999999999999998887654333
Q ss_pred ccccccccccccccccCcccceEEeeCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHhhcc
Q psy6736 948 DRGRRYLNVTAIEKSTGKENKITITNDRGRLSKEDIERMVNDAEKYKAEDEKQKAVISAKNSLESYCFNMKSKG 1021 (1023)
Q Consensus 948 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ls~eei~~~~~~~~~~~~~d~~~~~~~~akN~lE~~iy~~r~k~ 1021 (1023)
+.+ ..+||+++++++++++.+|..+|+..+++.++||+||+|||.+|+++
T Consensus 496 -----------------------i~~-~~~ls~~~i~~~~~~~~~~~~~d~~~~~~~~~kn~le~~i~~~~~~l 545 (621)
T CHL00094 496 -----------------------IQG-ASTLPKDEVERMVKEAEKNAAEDKEKREKIDLKNQAESLCYQAEKQL 545 (621)
T ss_pred -----------------------ecc-chhccHHHHHHHHHHHHHhhhcchhHHHHHHHHHHhHHHHHHHHHHH
Confidence 222 23699999999999999999999999999999999999999999987
No 30
>PRK00290 dnaK molecular chaperone DnaK; Provisional
Probab=100.00 E-value=2.5e-57 Score=548.53 Aligned_cols=357 Identities=56% Similarity=0.896 Sum_probs=333.9
Q ss_pred CcceEEEEEeCCceEEEEEEEEeCCEEEEEEecCCCCCcHHHHHHHHHHHHHHHHHhhhccCcchhHHHHHHHHHHHHHH
Q psy6736 633 GERNVLIFDLGGGTFDVSILTIEDGIFEVKSTAGDTHLGGEDFDNRMVNHFVQEFKRKYKKDLTTNKRALRRLRTACERA 712 (1023)
Q Consensus 633 ~~~~vlV~D~GggT~dvsi~~~~~~~~~v~~~~gd~~lGG~~~D~~l~~~~~~~~~~~~~~~~~~~~~~~~~L~~~~e~~ 712 (1023)
.++++|||||||||||+|++++.++.++|+++.||.++||++||.+|++|+.++|..+++.++..+++++.+|+.+||++
T Consensus 183 ~~~~vlV~D~GggT~dvsv~~~~~~~~~vla~~gd~~lGG~d~D~~l~~~~~~~~~~~~~~~~~~~~~~~~rL~~~ae~a 262 (627)
T PRK00290 183 GDEKILVYDLGGGTFDVSILEIGDGVFEVLSTNGDTHLGGDDFDQRIIDYLADEFKKENGIDLRKDKMALQRLKEAAEKA 262 (627)
T ss_pred CCCEEEEEECCCCeEEEEEEEEeCCeEEEEEecCCCCcChHHHHHHHHHHHHHHHHHhhCCCcccCHHHHHHHHHHHHHH
Confidence 46889999999999999999999999999999999999999999999999999999998888888899999999999999
Q ss_pred hhhcCCCceeEEEEecccCC----cceEEEecHHHHHHHHHHHHHHHHHHHHHHHHHcCCCccccceEEEecCccCcHHH
Q psy6736 713 KRTLSSSTQASIEIDSLFEG----VDFYTSITRARFEELNADLFRGTMEPVEKSLRDAKMDKAQIHDIVLVGGSTRIPKV 788 (1023)
Q Consensus 713 K~~Ls~~~~~~~~i~~~~~~----~~~~~~itr~~~~~~~~~~~~~~~~~i~~~l~~~~~~~~~i~~V~LvGG~srip~v 788 (1023)
|+.||.+.++.+.++.+..+ .++.++|||++|+++|+++++++..+++++|+++++++.+|+.|+||||+||||+|
T Consensus 263 K~~LS~~~~~~i~i~~~~~d~~g~~~~~~~itR~~fe~l~~~l~~~~~~~i~~~l~~a~~~~~~id~ViLvGGssriP~v 342 (627)
T PRK00290 263 KIELSSAQQTEINLPFITADASGPKHLEIKLTRAKFEELTEDLVERTIEPCKQALKDAGLSVSDIDEVILVGGSTRMPAV 342 (627)
T ss_pred HHHcCCCCeEEEEEeecccCCCCCeEEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHcCCChhhCcEEEEECCcCCChHH
Confidence 99999999999998876542 57889999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhhcCcccCCCCCCccceecchHHHHHHHhCCCcccccceEEeeccceeeEEEeeCceeEEeecCCCCCCcceEE
Q psy6736 789 QKLLQDFFNGKELNKSINPDEAVAYGAAVQAAILHGDKSEEVQDLLLLDVTPLSLGIETAGGVMTALIKRNTTIPTKQTQ 868 (1023)
Q Consensus 789 ~~~l~~~f~~~~~~~~~~p~~aVa~GAa~~a~~l~~~~~~~~~~~~~~d~~~~sigi~~~~~~~~~ii~~~~~lP~~~~~ 868 (1023)
++.|+++| +.++..++|||+|||+|||++|+.+++ +++++.+.|++|++||++..++.+.+|||+|+++|++++.
T Consensus 343 ~~~l~~~f-g~~~~~~~npdeava~GAa~~aa~l~~----~~~~~~~~d~~~~slgi~~~~~~~~~ii~~~t~~P~~~~~ 417 (627)
T PRK00290 343 QELVKEFF-GKEPNKGVNPDEVVAIGAAIQGGVLAG----DVKDVLLLDVTPLSLGIETLGGVMTKLIERNTTIPTKKSQ 417 (627)
T ss_pred HHHHHHHh-CCCCCcCcCChHHHHHhHHHHHHHhcC----CccceeeeeccceEEEEEecCCeEEEEecCCCcCCccceE
Confidence 99999999 567788999999999999999999986 3567899999999999999999999999999999999999
Q ss_pred EEEeecCCCCcEEEEEeecCccccccCceeeEEEEecCCCCCCCCCeEEEEEEECCCccEEEEEEEcccCceeeEEeccc
Q psy6736 869 TFTTYSDNQPGVLIQVYEGERAMTKDNNLLGKFELTSIPPAPRGVPQIEVTFDIDANGILNVTAIEKSTGKENKITITND 948 (1023)
Q Consensus 869 ~f~~~~~~q~~i~i~iyeg~~~~~~~~~~ig~~~l~~~~~~~~g~~~i~v~f~id~~gil~V~a~~~~~~~~~~~~~~~~ 948 (1023)
+|++..++|+.+.|.||||++....+|..||++.|.++|+.++|.++|+|+|++|.||+|+|++.+..+|+..++.+.
T Consensus 418 ~f~~~~d~q~~~~i~v~~ge~~~~~~~~~lg~~~i~~~~~~~~g~~~i~v~f~~d~~gil~v~a~~~~~~~~~~~~i~-- 495 (627)
T PRK00290 418 VFSTAADNQPAVTIHVLQGEREMAADNKSLGRFNLTGIPPAPRGVPQIEVTFDIDANGIVHVSAKDKGTGKEQSITIT-- 495 (627)
T ss_pred EEEecCCCcceEEEEEEEecccccCcCceEEEEEECCCCCCCCCCceEEEEEEECCCceEEEEEEEccCCceeEEEec--
Confidence 999999999999999999999999999999999999999999998899999999999999999998888765544332
Q ss_pred cccccccccccccccCcccceEEeeCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHhhcc
Q psy6736 949 RGRRYLNVTAIEKSTGKENKITITNDRGRLSKEDIERMVNDAEKYKAEDEKQKAVISAKNSLESYCFNMKSKG 1021 (1023)
Q Consensus 949 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ls~eei~~~~~~~~~~~~~d~~~~~~~~akN~lE~~iy~~r~k~ 1021 (1023)
+ ..+||+++++++++++.+|..+|+..+++.++||+||+|||.+|+++
T Consensus 496 ------------------------~-~~~ls~e~i~~~~~~~~~~~~~d~~~~~~~eakN~le~~i~~~~~~l 543 (627)
T PRK00290 496 ------------------------A-SSGLSDEEIERMVKDAEANAEEDKKRKELVEARNQADSLIYQTEKTL 543 (627)
T ss_pred ------------------------c-ccccCHHHHHHHHHHHHHhhhcchhHHHHHHHHHHHHHHHHHHHHHH
Confidence 2 23699999999999999999999999999999999999999999986
No 31
>TIGR02350 prok_dnaK chaperone protein DnaK. Members of this family are the chaperone DnaK, of the DnaK-DnaJ-GrpE chaperone system. All members of the seed alignment were taken from completely sequenced bacterial or archaeal genomes and (except for Mycoplasma sequence) found clustered with other genes of this systems. This model excludes DnaK homologs that are not DnaK itself, such as the heat shock cognate protein HscA (TIGR01991). However, it is not designed to distinguish among DnaK paralogs in eukaryotes. Note that a number of dnaK genes have shadow ORFs in the same reverse (relative to dnaK) reading frame, a few of which have been assigned glutamate dehydrogenase activity. The significance of this observation is unclear; lengths of such shadow ORFs are highly variable as if the presumptive protein product is not conserved.
Probab=100.00 E-value=8.4e-57 Score=542.83 Aligned_cols=358 Identities=58% Similarity=0.892 Sum_probs=334.1
Q ss_pred CCcceEEEEEeCCceEEEEEEEEeCCEEEEEEecCCCCCcHHHHHHHHHHHHHHHHHhhhccCcchhHHHHHHHHHHHHH
Q psy6736 632 SGERNVLIFDLGGGTFDVSILTIEDGIFEVKSTAGDTHLGGEDFDNRMVNHFVQEFKRKYKKDLTTNKRALRRLRTACER 711 (1023)
Q Consensus 632 ~~~~~vlV~D~GggT~dvsi~~~~~~~~~v~~~~gd~~lGG~~~D~~l~~~~~~~~~~~~~~~~~~~~~~~~~L~~~~e~ 711 (1023)
+.++++|||||||||||+|++++.++.++|+++.||.++||++||++|++|+.++|..+++.++..+++++.+|+.+||+
T Consensus 180 ~~~~~vlV~D~Gggt~dvsv~~~~~~~~~v~~~~gd~~lGG~d~D~~l~~~~~~~~~~~~~~~~~~~~~~~~~L~~~ae~ 259 (595)
T TIGR02350 180 KKDEKILVFDLGGGTFDVSILEIGDGVFEVLSTAGDTHLGGDDFDQRIIDWLADEFKKEEGIDLSKDKMALQRLKEAAEK 259 (595)
T ss_pred CCCcEEEEEECCCCeEEEEEEEecCCeEEEEEecCCcccCchhHHHHHHHHHHHHHHHhhCCCcccCHHHHHHHHHHHHH
Confidence 45688999999999999999999999999999999999999999999999999999999988888889999999999999
Q ss_pred HhhhcCCCceeEEEEecccC----CcceEEEecHHHHHHHHHHHHHHHHHHHHHHHHHcCCCccccceEEEecCccCcHH
Q psy6736 712 AKRTLSSSTQASIEIDSLFE----GVDFYTSITRARFEELNADLFRGTMEPVEKSLRDAKMDKAQIHDIVLVGGSTRIPK 787 (1023)
Q Consensus 712 ~K~~Ls~~~~~~~~i~~~~~----~~~~~~~itr~~~~~~~~~~~~~~~~~i~~~l~~~~~~~~~i~~V~LvGG~srip~ 787 (1023)
+|+.||.+.++.+.++.+.. +.++.++|||++|+++++|+++++.++++++|+++++++.+|+.|+||||+||||+
T Consensus 260 aK~~LS~~~~~~i~i~~~~~~~~g~~~~~~~itr~~fe~l~~~l~~~~~~~i~~~l~~a~~~~~~i~~V~LvGGssriP~ 339 (595)
T TIGR02350 260 AKIELSSVLSTEINLPFITADASGPKHLEMTLTRAKFEELTADLVERTKEPVRQALKDAGLSASDIDEVILVGGSTRIPA 339 (595)
T ss_pred HHHHcCCCCceEEEeeecccCCCCCeeEEEEEeHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHhHCcEEEEECCcccChH
Confidence 99999999999998887654 25788999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhhcCcccCCCCCCccceecchHHHHHHHhCCCcccccceEEeeccceeeEEEeeCceeEEeecCCCCCCcceE
Q psy6736 788 VQKLLQDFFNGKELNKSINPDEAVAYGAAVQAAILHGDKSEEVQDLLLLDVTPLSLGIETAGGVMTALIKRNTTIPTKQT 867 (1023)
Q Consensus 788 v~~~l~~~f~~~~~~~~~~p~~aVa~GAa~~a~~l~~~~~~~~~~~~~~d~~~~sigi~~~~~~~~~ii~~~~~lP~~~~ 867 (1023)
|++.|+++|+ .++...+|||+|||+|||++|+.+++. ++++.+.|++|++||++..++.+.+|||+|+++|++++
T Consensus 340 v~~~i~~~f~-~~~~~~~~pdeava~GAa~~aa~l~~~----~~~~~~~d~~~~~igi~~~~~~~~~ii~~~~~iP~~~~ 414 (595)
T TIGR02350 340 VQELVKDFFG-KEPNKSVNPDEVVAIGAAIQGGVLKGD----VKDVLLLDVTPLSLGIETLGGVMTKLIERNTTIPTKKS 414 (595)
T ss_pred HHHHHHHHhC-CcccCCcCcHHHHHHHHHHHHHHhcCC----cccceeeecccceeEEEecCCceEEEEeCCCcCCccce
Confidence 9999999995 677889999999999999999999763 56789999999999999999999999999999999999
Q ss_pred EEEEeecCCCCcEEEEEeecCccccccCceeeEEEEecCCCCCCCCCeEEEEEEECCCccEEEEEEEcccCceeeEEecc
Q psy6736 868 QTFTTYSDNQPGVLIQVYEGERAMTKDNNLLGKFELTSIPPAPRGVPQIEVTFDIDANGILNVTAIEKSTGKENKITITN 947 (1023)
Q Consensus 868 ~~f~~~~~~q~~i~i~iyeg~~~~~~~~~~ig~~~l~~~~~~~~g~~~i~v~f~id~~gil~V~a~~~~~~~~~~~~~~~ 947 (1023)
.+|++..++|+.+.|.||||++....+|..||++.+.++|+.++|.++|+|+|++|.||+|+|++.+..+|++..+.+.
T Consensus 415 ~~~~~~~d~q~~v~i~i~~ge~~~~~~~~~lg~~~i~~~~~~~~g~~~i~v~f~~d~~G~l~v~~~~~~~~~~~~~~i~- 493 (595)
T TIGR02350 415 QVFSTAADNQPAVDIHVLQGERPMAADNKSLGRFELTGIPPAPRGVPQIEVTFDIDANGILHVSAKDKGTGKEQSITIT- 493 (595)
T ss_pred EeeeccCCCCcEEEEEEEeecccccccCcEeEEEEECCCCCCCCCCceEEEEEEEcCCCeEEEEEEEccCCceEEEEec-
Confidence 9999999999999999999999999999999999999999999998899999999999999999999888775544332
Q ss_pred ccccccccccccccccCcccceEEeeCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHhhcc
Q psy6736 948 DRGRRYLNVTAIEKSTGKENKITITNDRGRLSKEDIERMVNDAEKYKAEDEKQKAVISAKNSLESYCFNMKSKG 1021 (1023)
Q Consensus 948 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ls~eei~~~~~~~~~~~~~d~~~~~~~~akN~lE~~iy~~r~k~ 1021 (1023)
.. .+||+++++++++++.++..+|+.++++.++||+||+|||.+|+++
T Consensus 494 -------------------------~~-~~ls~~~~~~~~~~~~~~~~~D~~~~~~~e~kn~lEs~iy~~r~~l 541 (595)
T TIGR02350 494 -------------------------AS-SGLSEEEIERMVKEAEANAEEDKKRKEEIEARNNADSLAYQAEKTL 541 (595)
T ss_pred -------------------------cc-cccCHHHHHHHHHHHHHhhhcchhHHHHHHHHHHHHHHHHHHHHHH
Confidence 22 3699999999999999999999999999999999999999999987
No 32
>TIGR01991 HscA Fe-S protein assembly chaperone HscA. The Heat Shock Cognate proteins HscA and HscB act together as chaperones. HscA resembles DnaK but belongs in a separate clade. The apparent function is to aid assembly of iron-sulfur cluster proteins. Homologs from Buchnera and Wolbachia are clearly in the same clade but are highly derived and score lower than some examples of DnaK.
Probab=100.00 E-value=1.4e-56 Score=536.18 Aligned_cols=353 Identities=42% Similarity=0.661 Sum_probs=326.0
Q ss_pred CcceEEEEEeCCceEEEEEEEEeCCEEEEEEecCCCCCcHHHHHHHHHHHHHHHHHhhhccCcchhHHHHHHHHHHHHHH
Q psy6736 633 GERNVLIFDLGGGTFDVSILTIEDGIFEVKSTAGDTHLGGEDFDNRMVNHFVQEFKRKYKKDLTTNKRALRRLRTACERA 712 (1023)
Q Consensus 633 ~~~~vlV~D~GggT~dvsi~~~~~~~~~v~~~~gd~~lGG~~~D~~l~~~~~~~~~~~~~~~~~~~~~~~~~L~~~~e~~ 712 (1023)
.++++|||||||||||+||+++.++.++|++++||.+|||+|||.+|++|+.+++ +.+...+++.+.+|+.+||++
T Consensus 179 ~~~~vlV~DlGgGT~DvSi~~~~~~~~~vla~~gd~~lGG~d~D~~l~~~l~~~~----~~~~~~~~~~~~~L~~~ae~a 254 (599)
T TIGR01991 179 SEGIYAVYDLGGGTFDVSILKLTKGVFEVLATGGDSALGGDDFDHALAKWILKQL----GISADLNPEDQRLLLQAARAA 254 (599)
T ss_pred CCCEEEEEEcCCCeEEEEEEEEcCCeEEEEEEcCCCCCCHHHHHHHHHHHHHHhh----CCCCCCCHHHHHHHHHHHHHH
Confidence 4678999999999999999999999999999999999999999999999999764 344456788899999999999
Q ss_pred hhhcCCCceeEEEEecccCCcceEEEecHHHHHHHHHHHHHHHHHHHHHHHHHcCCCccccceEEEecCccCcHHHHHHH
Q psy6736 713 KRTLSSSTQASIEIDSLFEGVDFYTSITRARFEELNADLFRGTMEPVEKSLRDAKMDKAQIHDIVLVGGSTRIPKVQKLL 792 (1023)
Q Consensus 713 K~~Ls~~~~~~~~i~~~~~~~~~~~~itr~~~~~~~~~~~~~~~~~i~~~l~~~~~~~~~i~~V~LvGG~srip~v~~~l 792 (1023)
|+.||.+.++.+.++. +|.++.++|||++|+++++|+++++.++++++|+++++++.+|+.|+||||+||||+|+++|
T Consensus 255 K~~LS~~~~~~i~i~~--~g~~~~~~itr~efe~l~~~ll~~i~~~i~~~L~~a~~~~~~id~ViLvGGssriP~V~~~l 332 (599)
T TIGR01991 255 KEALTDAESVEVDFTL--DGKDFKGKLTRDEFEALIQPLVQKTLSICRRALRDAGLSVEEIKGVVLVGGSTRMPLVRRAV 332 (599)
T ss_pred HHhCCCCceEEEEEEE--CCcEEEEEEeHHHHHHHHHHHHHHHHHHHHHHHHHcCCChhhCCEEEEECCcCCChHHHHHH
Confidence 9999999988888864 78899999999999999999999999999999999999999999999999999999999999
Q ss_pred HHhhcCcccCCCCCCccceecchHHHHHHHhCCCcccccceEEeeccceeeEEEeeCceeEEeecCCCCCCcceEEEEEe
Q psy6736 793 QDFFNGKELNKSINPDEAVAYGAAVQAAILHGDKSEEVQDLLLLDVTPLSLGIETAGGVMTALIKRNTTIPTKQTQTFTT 872 (1023)
Q Consensus 793 ~~~f~~~~~~~~~~p~~aVa~GAa~~a~~l~~~~~~~~~~~~~~d~~~~sigi~~~~~~~~~ii~~~~~lP~~~~~~f~~ 872 (1023)
+++|+ ..+..++|||+|||+|||++|+.+++. +..+++.+.|++|++||+++.+|.+.+|||||+++|++++..|++
T Consensus 333 ~~~f~-~~~~~~~npdeaVA~GAai~a~~l~~~--~~~~~~~l~dv~p~slgi~~~~g~~~~ii~rnt~iP~~~~~~~~t 409 (599)
T TIGR01991 333 AELFG-QEPLTDIDPDQVVALGAAIQADLLAGN--RIGNDLLLLDVTPLSLGIETMGGLVEKIIPRNTPIPVARAQEFTT 409 (599)
T ss_pred HHHhC-CCCCCCCCCcHHHHHHHHHHHHHhccc--cccCceEEEEeeeeeeEEEecCCEEEEEEeCCCcCCccceEEEEE
Confidence 99995 556778999999999999999999863 344678999999999999999999999999999999999999999
Q ss_pred ecCCCCcEEEEEeecCccccccCceeeEEEEecCCCCCCCCCeEEEEEEECCCccEEEEEEEcccCceeeEEeccccccc
Q psy6736 873 YSDNQPGVLIQVYEGERAMTKDNNLLGKFELTSIPPAPRGVPQIEVTFDIDANGILNVTAIEKSTGKENKITITNDRGRR 952 (1023)
Q Consensus 873 ~~~~q~~i~i~iyeg~~~~~~~~~~ig~~~l~~~~~~~~g~~~i~v~f~id~~gil~V~a~~~~~~~~~~~~~~~~~~~~ 952 (1023)
..++|+.+.|.||||++....+|..||+|.|.++|+.+.|.++|+|+|++|.||+|+|++.+..||++..+.+.
T Consensus 410 ~~d~q~~v~i~i~qGe~~~~~~n~~lg~~~l~~i~~~~~g~~~i~v~f~id~~gil~V~a~~~~t~~~~~~~i~------ 483 (599)
T TIGR01991 410 YKDGQTAMVIHVVQGERELVEDCRSLARFELRGIPPMVAGAARIRVTFQVDADGLLTVSAQEQSTGVEQSIQVK------ 483 (599)
T ss_pred ccCCCeEEEEEEEeecccccccCceEEEEEEcCCCCCCCCCCcEEEEEEECCCCeEEEEEEECCCCcEEEEecc------
Confidence 99999999999999999999999999999999999999999999999999999999999999988876554332
Q ss_pred cccccccccccCcccceEEeeCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHhhcc
Q psy6736 953 YLNVTAIEKSTGKENKITITNDRGRLSKEDIERMVNDAEKYKAEDEKQKAVISAKNSLESYCFNMKSKG 1021 (1023)
Q Consensus 953 ~~~~~~~~~~~~~~~~~~~~~~~~~ls~eei~~~~~~~~~~~~~d~~~~~~~~akN~lE~~iy~~r~k~ 1021 (1023)
+ ..+||+++++++.+++.++..+|+..++..++||++|+|+|.++..+
T Consensus 484 --------------------~-~~~l~~~~i~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~ 531 (599)
T TIGR01991 484 --------------------P-SYGLSDEEIERMLKDSFKHAEEDMYARALAEQKVEAERILEALQAAL 531 (599)
T ss_pred --------------------c-ccCCCHHHHHHHHHHHHhhhhhhHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 2 23599999999999999999999999999999999999999998765
No 33
>PRK05183 hscA chaperone protein HscA; Provisional
Probab=100.00 E-value=5.4e-56 Score=532.04 Aligned_cols=349 Identities=40% Similarity=0.652 Sum_probs=320.4
Q ss_pred CcceEEEEEeCCceEEEEEEEEeCCEEEEEEecCCCCCcHHHHHHHHHHHHHHHHHhhhccCcchhHHHHHHHHHHHHHH
Q psy6736 633 GERNVLIFDLGGGTFDVSILTIEDGIFEVKSTAGDTHLGGEDFDNRMVNHFVQEFKRKYKKDLTTNKRALRRLRTACERA 712 (1023)
Q Consensus 633 ~~~~vlV~D~GggT~dvsi~~~~~~~~~v~~~~gd~~lGG~~~D~~l~~~~~~~~~~~~~~~~~~~~~~~~~L~~~~e~~ 712 (1023)
.++++|||||||||||+||+++.++.++|++++||.+|||+|||.+|++|+.++++. +...+++++.+|+.+||++
T Consensus 199 ~~~~vlV~DlGGGT~DvSv~~~~~~~~evlat~gd~~lGG~d~D~~l~~~~~~~~~~----~~~~~~~~~~~L~~~ae~a 274 (616)
T PRK05183 199 QEGVIAVYDLGGGTFDISILRLSKGVFEVLATGGDSALGGDDFDHLLADWILEQAGL----SPRLDPEDQRLLLDAARAA 274 (616)
T ss_pred CCCEEEEEECCCCeEEEEEEEeeCCEEEEEEecCCCCcCHHHHHHHHHHHHHHHcCC----CcCCCHHHHHHHHHHHHHH
Confidence 467899999999999999999999999999999999999999999999999987643 3335778899999999999
Q ss_pred hhhcCCCceeEEEEecccCCcceEEEecHHHHHHHHHHHHHHHHHHHHHHHHHcCCCccccceEEEecCccCcHHHHHHH
Q psy6736 713 KRTLSSSTQASIEIDSLFEGVDFYTSITRARFEELNADLFRGTMEPVEKSLRDAKMDKAQIHDIVLVGGSTRIPKVQKLL 792 (1023)
Q Consensus 713 K~~Ls~~~~~~~~i~~~~~~~~~~~~itr~~~~~~~~~~~~~~~~~i~~~l~~~~~~~~~i~~V~LvGG~srip~v~~~l 792 (1023)
|+.||.+.++.+.+..+ ...|||++|+++++|+++++..+++++|+++++.+++|+.|+||||+||||+|+++|
T Consensus 275 K~~LS~~~~~~i~i~~~------~~~itr~efe~l~~~l~~~~~~~i~~~L~~a~~~~~~i~~ViLvGGssriP~v~~~l 348 (616)
T PRK05183 275 KEALSDADSVEVSVALW------QGEITREQFNALIAPLVKRTLLACRRALRDAGVEADEVKEVVMVGGSTRVPLVREAV 348 (616)
T ss_pred HHhcCCCceEEEEEecC------CCeEcHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcccCCEEEEECCcccChHHHHHH
Confidence 99999999888887532 234999999999999999999999999999999999999999999999999999999
Q ss_pred HHhhcCcccCCCCCCccceecchHHHHHHHhCCCcccccceEEeeccceeeEEEeeCceeEEeecCCCCCCcceEEEEEe
Q psy6736 793 QDFFNGKELNKSINPDEAVAYGAAVQAAILHGDKSEEVQDLLLLDVTPLSLGIETAGGVMTALIKRNTTIPTKQTQTFTT 872 (1023)
Q Consensus 793 ~~~f~~~~~~~~~~p~~aVa~GAa~~a~~l~~~~~~~~~~~~~~d~~~~sigi~~~~~~~~~ii~~~~~lP~~~~~~f~~ 872 (1023)
+++|+ ..+..++|||+|||+|||++|+.+++. ....++.+.|++|++||+++.+|.+.+|||+|+++|++++..|++
T Consensus 349 ~~~fg-~~~~~~~npdeaVA~GAAi~a~~l~~~--~~~~~~~l~dv~p~slgi~~~~g~~~~ii~r~t~iP~~~~~~~~t 425 (616)
T PRK05183 349 GEFFG-RTPLTSIDPDKVVAIGAAIQADILAGN--KPDSDMLLLDVIPLSLGLETMGGLVEKIIPRNTTIPVARAQEFTT 425 (616)
T ss_pred HHHhc-cCcCcCCCchHHHHHHHHHHHHHhccc--cccCceEEEeeccccccceecCCeEEEEEeCCCcccccccEEEEe
Confidence 99995 455678999999999999999999864 234678999999999999999999999999999999999999999
Q ss_pred ecCCCCcEEEEEeecCccccccCceeeEEEEecCCCCCCCCCeEEEEEEECCCccEEEEEEEcccCceeeEEeccccccc
Q psy6736 873 YSDNQPGVLIQVYEGERAMTKDNNLLGKFELTSIPPAPRGVPQIEVTFDIDANGILNVTAIEKSTGKENKITITNDRGRR 952 (1023)
Q Consensus 873 ~~~~q~~i~i~iyeg~~~~~~~~~~ig~~~l~~~~~~~~g~~~i~v~f~id~~gil~V~a~~~~~~~~~~~~~~~~~~~~ 952 (1023)
..++|+.+.|.||||++....+|..||++.|.++|+.++|.++|+|+|++|.||+|+|++.+..+|++..+.+.+
T Consensus 426 ~~d~q~~v~i~v~qGe~~~~~~n~~lg~~~i~~i~~~~~g~~~i~v~f~~d~~Gil~V~a~~~~~~~~~~~~i~~----- 500 (616)
T PRK05183 426 FKDGQTAMAIHVVQGERELVADCRSLARFELRGIPPMAAGAARIRVTFQVDADGLLSVTAMEKSTGVEASIQVKP----- 500 (616)
T ss_pred ccCCCeEEEEEEecccccccccccEEEEEEeCCCCCCCCCCccEEEEEEECCCCeEEEEEEEcCCCcEEEecccc-----
Confidence 999999999999999999999999999999999999999999999999999999999999999998876554432
Q ss_pred cccccccccccCcccceEEeeCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHhhcc
Q psy6736 953 YLNVTAIEKSTGKENKITITNDRGRLSKEDIERMVNDAEKYKAEDEKQKAVISAKNSLESYCFNMKSKG 1021 (1023)
Q Consensus 953 ~~~~~~~~~~~~~~~~~~~~~~~~~ls~eei~~~~~~~~~~~~~d~~~~~~~~akN~lE~~iy~~r~k~ 1021 (1023)
..+||+++++++++++.++..+|+..+++.++||++|+|+|.+++++
T Consensus 501 ----------------------~~~ls~~~i~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~i~~~~~~~ 547 (616)
T PRK05183 501 ----------------------SYGLTDDEIARMLKDSMSHAEEDMQARALAEQKVEAERVLEALQAAL 547 (616)
T ss_pred ----------------------cccCCHHHHHHHHHHHHhhhhhhhhHHHHHHHHHHHHHHHHHHHHHH
Confidence 23599999999999999999999999999999999999999999876
No 34
>PRK01433 hscA chaperone protein HscA; Provisional
Probab=100.00 E-value=8.9e-54 Score=507.63 Aligned_cols=335 Identities=37% Similarity=0.579 Sum_probs=303.1
Q ss_pred CcceEEEEEeCCceEEEEEEEEeCCEEEEEEecCCCCCcHHHHHHHHHHHHHHHHHhhhccCcchhHHHHHHHHHHHHHH
Q psy6736 633 GERNVLIFDLGGGTFDVSILTIEDGIFEVKSTAGDTHLGGEDFDNRMVNHFVQEFKRKYKKDLTTNKRALRRLRTACERA 712 (1023)
Q Consensus 633 ~~~~vlV~D~GggT~dvsi~~~~~~~~~v~~~~gd~~lGG~~~D~~l~~~~~~~~~~~~~~~~~~~~~~~~~L~~~~e~~ 712 (1023)
.++++|||||||||||+|++++.++.++|++++||.+|||+|||.+|++|++++|... .+.+ .+..||++
T Consensus 191 ~~~~vlV~DlGGGT~DvSi~~~~~~~~~V~at~gd~~lGG~d~D~~l~~~~~~~~~~~------~~~~----~~~~~eka 260 (595)
T PRK01433 191 QKGCYLVYDLGGGTFDVSILNIQEGIFQVIATNGDNMLGGNDIDVVITQYLCNKFDLP------NSID----TLQLAKKA 260 (595)
T ss_pred CCCEEEEEECCCCcEEEEEEEEeCCeEEEEEEcCCcccChHHHHHHHHHHHHHhcCCC------CCHH----HHHHHHHH
Confidence 3568999999999999999999999999999999999999999999999999887421 1222 23359999
Q ss_pred hhhcCCCceeEEEEecccCCcceEEEecHHHHHHHHHHHHHHHHHHHHHHHHHcCCCccccceEEEecCccCcHHHHHHH
Q psy6736 713 KRTLSSSTQASIEIDSLFEGVDFYTSITRARFEELNADLFRGTMEPVEKSLRDAKMDKAQIHDIVLVGGSTRIPKVQKLL 792 (1023)
Q Consensus 713 K~~Ls~~~~~~~~i~~~~~~~~~~~~itr~~~~~~~~~~~~~~~~~i~~~l~~~~~~~~~i~~V~LvGG~srip~v~~~l 792 (1023)
|+.||.+..... ..++|||++|+++++|++++++.+++++|++++ ..+|+.|+||||+||||+|+++|
T Consensus 261 K~~LS~~~~~~~----------~~~~itr~efe~l~~~l~~~~~~~i~~~L~~a~--~~~Id~ViLvGGssriP~v~~~l 328 (595)
T PRK01433 261 KETLTYKDSFNN----------DNISINKQTLEQLILPLVERTINIAQECLEQAG--NPNIDGVILVGGATRIPLIKDEL 328 (595)
T ss_pred HHhcCCCccccc----------ceEEEcHHHHHHHHHHHHHHHHHHHHHHHhhcC--cccCcEEEEECCcccChhHHHHH
Confidence 999998765321 168899999999999999999999999999998 67899999999999999999999
Q ss_pred HHhhcCcccCCCCCCccceecchHHHHHHHhCCCcccccceEEeeccceeeEEEeeCceeEEeecCCCCCCcceEEEEEe
Q psy6736 793 QDFFNGKELNKSINPDEAVAYGAAVQAAILHGDKSEEVQDLLLLDVTPLSLGIETAGGVMTALIKRNTTIPTKQTQTFTT 872 (1023)
Q Consensus 793 ~~~f~~~~~~~~~~p~~aVa~GAa~~a~~l~~~~~~~~~~~~~~d~~~~sigi~~~~~~~~~ii~~~~~lP~~~~~~f~~ 872 (1023)
+++|+ .++..+.|||+|||+|||++|+.+++. ..++.+.|++|++||+++.+|.+.+|||||++||+++++.|++
T Consensus 329 ~~~f~-~~~~~~~npdeaVA~GAAi~a~~l~~~----~~~~~l~Dv~p~slgi~~~~g~~~~ii~rnt~iP~~~~~~f~t 403 (595)
T PRK01433 329 YKAFK-VDILSDIDPDKAVVWGAALQAENLIAP----HTNSLLIDVVPLSLGMELYGGIVEKIIMRNTPIPISVVKEFTT 403 (595)
T ss_pred HHHhC-CCceecCCchHHHHHHHHHHHHHhhCC----ccceEEEEecccceEEEecCCEEEEEEECCCcccceeeEEeEe
Confidence 99994 667788999999999999999999753 3468899999999999999999999999999999999999999
Q ss_pred ecCCCCcEEEEEeecCccccccCceeeEEEEecCCCCCCCCCeEEEEEEECCCccEEEEEEEcccCceeeEEeccccccc
Q psy6736 873 YSDNQPGVLIQVYEGERAMTKDNNLLGKFELTSIPPAPRGVPQIEVTFDIDANGILNVTAIEKSTGKENKITITNDRGRR 952 (1023)
Q Consensus 873 ~~~~q~~i~i~iyeg~~~~~~~~~~ig~~~l~~~~~~~~g~~~i~v~f~id~~gil~V~a~~~~~~~~~~~~~~~~~~~~ 952 (1023)
..++|+.+.|.||||++....+|..||+|.|.++|+.++|.++|+|+|++|.||+|+|++.+..||++..+.+..
T Consensus 404 ~~d~q~~v~i~v~qGe~~~~~~n~~lg~~~l~~i~~~~~g~~~i~vtf~id~~Gil~V~a~~~~t~~~~~~~i~~----- 478 (595)
T PRK01433 404 YADNQTGIQFHILQGEREMAADCRSLARFELKGLPPMKAGSIRAEVTFAIDADGILSVSAYEKISNTSHAIEVKP----- 478 (595)
T ss_pred ecCCCeEEEEEEEeccccccCCCcEEEEEEEcCCCCCCCCCccEEEEEEECCCCcEEEEEEEcCCCcEEEEEecC-----
Confidence 999999999999999999999999999999999999999999999999999999999999999999876655432
Q ss_pred cccccccccccCcccceEEeeCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHhhcc
Q psy6736 953 YLNVTAIEKSTGKENKITITNDRGRLSKEDIERMVNDAEKYKAEDEKQKAVISAKNSLESYCFNMKSKG 1021 (1023)
Q Consensus 953 ~~~~~~~~~~~~~~~~~~~~~~~~~ls~eei~~~~~~~~~~~~~d~~~~~~~~akN~lE~~iy~~r~k~ 1021 (1023)
..+||++|+++++++.+++..+|+..++..+++|++|+++|.+++.+
T Consensus 479 ----------------------~~~ls~~ei~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~ 525 (595)
T PRK01433 479 ----------------------NHGIDKTEIDIMLENAYKNAKIDYTTRLLQEAVIEAEALIFNIERAI 525 (595)
T ss_pred ----------------------CCCCCHHHHHHHHHHHHhhhhhhHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 23599999999999999999999999999999999999999988654
No 35
>COG0443 DnaK Molecular chaperone [Posttranslational modification, protein turnover, chaperones]
Probab=100.00 E-value=3e-53 Score=499.89 Aligned_cols=358 Identities=58% Similarity=0.889 Sum_probs=339.8
Q ss_pred CcceEEEEEeCCceEEEEEEEEeCCEEEEEEecCCCCCcHHHHHHHHHHHHHHHHHhhhccCcchhHHHHHHHHHHHHHH
Q psy6736 633 GERNVLIFDLGGGTFDVSILTIEDGIFEVKSTAGDTHLGGEDFDNRMVNHFVQEFKRKYKKDLTTNKRALRRLRTACERA 712 (1023)
Q Consensus 633 ~~~~vlV~D~GggT~dvsi~~~~~~~~~v~~~~gd~~lGG~~~D~~l~~~~~~~~~~~~~~~~~~~~~~~~~L~~~~e~~ 712 (1023)
++.+||||||||||||+||+++.++.++|+++.||.+|||+|||.+|++|+..+|..+++.++..++.++++|+.+||++
T Consensus 170 ~~~~vlV~DlGGGTfDvSll~~~~g~~ev~at~gd~~LGGddfD~~l~~~~~~~f~~~~~~d~~~~~~~~~rL~~~ae~a 249 (579)
T COG0443 170 KEKTVLVYDLGGGTFDVSLLEIGDGVFEVLATGGDNHLGGDDFDNALIDYLVMEFKGKGGIDLRSDKAALQRLREAAEKA 249 (579)
T ss_pred CCcEEEEEEcCCCCEEEEEEEEcCCEEEEeecCCCcccCchhHHHHHHHHHHHHhhccCCccccccHHHHHHHHHHHHHH
Confidence 67899999999999999999999999999999999999999999999999999999998899999999999999999999
Q ss_pred hhhcCCCceeEEEEecccCCcceEEEecHHHHHHHHHHHHHHHHHHHHHHHHHcCCCccccceEEEecCccCcHHHHHHH
Q psy6736 713 KRTLSSSTQASIEIDSLFEGVDFYTSITRARFEELNADLFRGTMEPVEKSLRDAKMDKAQIHDIVLVGGSTRIPKVQKLL 792 (1023)
Q Consensus 713 K~~Ls~~~~~~~~i~~~~~~~~~~~~itr~~~~~~~~~~~~~~~~~i~~~l~~~~~~~~~i~~V~LvGG~srip~v~~~l 792 (1023)
|+.||...++.+.++++..+.++..+|||++||+++.+++.+++.++..+|.++++++.+|+.|+||||+||||.|++.+
T Consensus 250 K~~LS~~~~~~i~~~~~~~~~~~~~~ltR~~~E~l~~dll~r~~~~~~~al~~a~l~~~~I~~VilvGGstriP~V~~~v 329 (579)
T COG0443 250 KIELSSATQTSINLPSIGGDIDLLKELTRAKFEELILDLLERTIEPVEQALKDAGLEKSDIDLVILVGGSTRIPAVQELV 329 (579)
T ss_pred HHHcccccccccchhhccccchhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHcCCChhhCceEEEccceeccHHHHHHH
Confidence 99999999999999887777788999999999999999999999999999999999999999999999999999999999
Q ss_pred HHhhcCcccCCCCCCccceecchHHHHHHHhCCCcccccceEEeeccceeeEEEeeCceeEEeecCCCCCCcceEEEEEe
Q psy6736 793 QDFFNGKELNKSINPDEAVAYGAAVQAAILHGDKSEEVQDLLLLDVTPLSLGIETAGGVMTALIKRNTTIPTKQTQTFTT 872 (1023)
Q Consensus 793 ~~~f~~~~~~~~~~p~~aVa~GAa~~a~~l~~~~~~~~~~~~~~d~~~~sigi~~~~~~~~~ii~~~~~lP~~~~~~f~~ 872 (1023)
+++|+ +++...+|||++||.|||++|+.+++.. .++++.|++|+++|++..++.+.++|++|+.+|.++...|++
T Consensus 330 ~~~f~-~~~~~~inpdeava~GAa~qa~~l~~~~----~d~ll~Dv~plslgie~~~~~~~~ii~rn~~iP~~~~~~f~t 404 (579)
T COG0443 330 KEFFG-KEPEKSINPDEAVALGAAIQAAVLSGEV----PDVLLLDVIPLSLGIETLGGVRTPIIERNTTIPVKKSQEFST 404 (579)
T ss_pred HHHhC-ccccccCCccHHHHHHHHHHHHhhcCcc----cCceEEeeeeeccccccCcchhhhHHhcCCCCCcccceEEEe
Confidence 99995 7888999999999999999999998743 288999999999999999999999999999999999999999
Q ss_pred ecCCCCcEEEEEeecCccccccCceeeEEEEecCCCCCCCCCeEEEEEEECCCccEEEEEEEcccCceeeEEeccccccc
Q psy6736 873 YSDNQPGVLIQVYEGERAMTKDNNLLGKFELTSIPPAPRGVPQIEVTFDIDANGILNVTAIEKSTGKENKITITNDRGRR 952 (1023)
Q Consensus 873 ~~~~q~~i~i~iyeg~~~~~~~~~~ig~~~l~~~~~~~~g~~~i~v~f~id~~gil~V~a~~~~~~~~~~~~~~~~~~~~ 952 (1023)
..|+|..+.++++||++....+|..+|.|.+.++|+.+.|.+.|+|+|.+|.||+++|++.+..+|++..++|.
T Consensus 405 ~~d~q~~~~i~v~qge~~~~~~~~~lg~f~l~~i~~~~~g~~~i~v~f~iD~~gi~~v~a~~~~~~k~~~i~i~------ 478 (579)
T COG0443 405 AADGQTAVAIHVFQGEREMAADNKSLGRFELDGIPPAPRGVPQIEVTFDIDANGILNVTAKDLGTGKEQSITIK------ 478 (579)
T ss_pred ecCCCceeEEEEEecchhhcccCceeEEEECCCCCCCCCCCCceEEEeccCCCcceEeeeecccCCceEEEEEe------
Confidence 99999999999999999999999999999999999999999999999999999999999988888887665544
Q ss_pred cccccccccccCcccceEEeeCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHhhccC
Q psy6736 953 YLNVTAIEKSTGKENKITITNDRGRLSKEDIERMVNDAEKYKAEDEKQKAVISAKNSLESYCFNMKSKGR 1022 (1023)
Q Consensus 953 ~~~~~~~~~~~~~~~~~~~~~~~~~ls~eei~~~~~~~~~~~~~d~~~~~~~~akN~lE~~iy~~r~k~~ 1022 (1023)
...+ |++++++.+.+....+.+.|+..++..+.+|..|+++|.++..++
T Consensus 479 --------------------~~~~-ls~~~i~~~~~~a~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~l~ 527 (579)
T COG0443 479 --------------------ASSG-LSDEEIERMVEDAEANAALDKKFRELVEARNEAESLIYSLEKALK 527 (579)
T ss_pred --------------------cCCC-CCHHHHHHHHHHHHHHHhhHHHHHHHHHhhHHHHHHHHHHHHHHh
Confidence 4445 999999999999999999999999999999999999999987664
No 36
>PF00012 HSP70: Hsp70 protein; InterPro: IPR013126 Heat shock proteins, Hsp70 chaperones help to fold many proteins. Hsp70 assisted folding involves repeated cycles of substrate binding and release. Hsp70 activity is ATP dependent. Hsp70 proteins are made up of two regions: the amino terminus is the ATPase domain and the carboxyl terminus is the substrate binding region []. Hsp70 proteins have an average molecular weight of 70 kDa [, , ]. In most species,there are many proteins that belong to the hsp70 family. Some of these are only expressed under stress conditions (strictly inducible), while some are present in cells under normal growth conditions and are not heat-inducible (constitutive or cognate) [, ]. Hsp70 proteins can be found in different cellular compartments(nuclear, cytosolic, mitochondrial, endoplasmic reticulum, for example).; PDB: 2P32_D 3D2F_A 2QXL_A 3D2E_C 3C7N_A 3FE1_C 4ANI_C 2V7Y_A 2KHO_A 3DPQ_B ....
Probab=100.00 E-value=1e-50 Score=495.92 Aligned_cols=360 Identities=48% Similarity=0.810 Sum_probs=330.5
Q ss_pred CcceEEEEEeCCceEEEEEEEEeCCEEEEEEecCCCCCcHHHHHHHHHHHHHHHHHhhhccCcchhHHHHHHHHHHHHHH
Q psy6736 633 GERNVLIFDLGGGTFDVSILTIEDGIFEVKSTAGDTHLGGEDFDNRMVNHFVQEFKRKYKKDLTTNKRALRRLRTACERA 712 (1023)
Q Consensus 633 ~~~~vlV~D~GggT~dvsi~~~~~~~~~v~~~~gd~~lGG~~~D~~l~~~~~~~~~~~~~~~~~~~~~~~~~L~~~~e~~ 712 (1023)
.++++|||||||||||+|++++.++.++++++.|+..+||++||.+|++|+.++|..+++.+...+++.+.+|+.+||++
T Consensus 186 ~~~~vlv~D~Gggt~dvs~~~~~~~~~~v~~~~~~~~lGG~~~D~~l~~~~~~~~~~~~~~d~~~~~~~~~~L~~~~e~~ 265 (602)
T PF00012_consen 186 KGKTVLVVDFGGGTFDVSVVEFSNGQFEVLATAGDNNLGGRDFDEALAEYLLEKFKKKYKIDLRENPRAMARLLEAAEKA 265 (602)
T ss_dssp SEEEEEEEEEESSEEEEEEEEEETTEEEEEEEEEETTCSHHHHHHHHHHHHHHHHHHHHSS-GTCSHHHHHHHHHHHHHH
T ss_pred cccceeccccccceEeeeehhcccccccccccccccccccceecceeecccccccccccccccccccccccccccccccc
Confidence 57899999999999999999999999999999999999999999999999999999998888888899999999999999
Q ss_pred hhhcCC--CceeEEEEecccC-CcceEEEecHHHHHHHHHHHHHHHHHHHHHHHHHcCCCccccceEEEecCccCcHHHH
Q psy6736 713 KRTLSS--STQASIEIDSLFE-GVDFYTSITRARFEELNADLFRGTMEPVEKSLRDAKMDKAQIHDIVLVGGSTRIPKVQ 789 (1023)
Q Consensus 713 K~~Ls~--~~~~~~~i~~~~~-~~~~~~~itr~~~~~~~~~~~~~~~~~i~~~l~~~~~~~~~i~~V~LvGG~srip~v~ 789 (1023)
|+.||. +.+..+.++.+.+ |.++.+.|||++|+++++|+++++.++++++|++++++.++|+.|+||||+||+|+|+
T Consensus 266 K~~Ls~~~~~~~~~~~~~~~~~~~~~~~~itr~~fe~l~~~~~~~~~~~i~~~l~~~~~~~~~i~~V~lvGG~sr~p~v~ 345 (602)
T PF00012_consen 266 KEQLSSNDNTEITISIESLYDDGEDFSITITREEFEELCEPLLERIIEPIEKALKDAGLKKEDIDSVLLVGGSSRIPYVQ 345 (602)
T ss_dssp HHHTTTSSSSEEEEEEEEEETTTEEEEEEEEHHHHHHHTHHHHHHTHHHHHHHHHHTT--GGGESEEEEESGGGGSHHHH
T ss_pred ccccccccccccccccccccccccccccccccceecccccccccccccccccccccccccccccceeEEecCcccchhhh
Confidence 999999 6777788887777 8899999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHhhcCcccCCCCCCccceecchHHHHHHHhCCCcccccceEEeeccceeeEEEeeCceeEEeecCCCCCCcceEEE
Q psy6736 790 KLLQDFFNGKELNKSINPDEAVAYGAAVQAAILHGDKSEEVQDLLLLDVTPLSLGIETAGGVMTALIKRNTTIPTKQTQT 869 (1023)
Q Consensus 790 ~~l~~~f~~~~~~~~~~p~~aVa~GAa~~a~~l~~~~~~~~~~~~~~d~~~~sigi~~~~~~~~~ii~~~~~lP~~~~~~ 869 (1023)
+.|++.|+ ..+..++||++|||+|||++|+.+++. ++.+++.+.|++|++||++..++.+.+++++|+++|...+..
T Consensus 346 ~~l~~~f~-~~~~~~~~p~~aVA~GAa~~a~~~~~~--~~~~~~~~~d~~~~~~~i~~~~~~~~~ii~~~t~iP~~~~~~ 422 (602)
T PF00012_consen 346 EALKELFG-KKISKSVNPDEAVARGAALYAAILSGS--FRVKDIKIIDVTPFSIGIEVSNGKFSKIIPKNTPIPSKKSKS 422 (602)
T ss_dssp HHHHHHTT-SEEB-SS-TTTHHHHHHHHHHHHHHTS--CSSTSSCESEBESSEEEEEETTTEEEEEESTTEBSSEEEEEE
T ss_pred hhhhhccc-cccccccccccccccccccchhhhccc--cccccccccccccccccccccccccccccccccccccccccc
Confidence 99999996 778889999999999999999999863 456788999999999999999999999999999999999999
Q ss_pred EEeecCCCCcEEEEEeecCccccccCceeeEEEEecCCCCCCCCCeEEEEEEECCCccEEEEEEEcccCceeeEEecccc
Q psy6736 870 FTTYSDNQPGVLIQVYEGERAMTKDNNLLGKFELTSIPPAPRGVPQIEVTFDIDANGILNVTAIEKSTGKENKITITNDR 949 (1023)
Q Consensus 870 f~~~~~~q~~i~i~iyeg~~~~~~~~~~ig~~~l~~~~~~~~g~~~i~v~f~id~~gil~V~a~~~~~~~~~~~~~~~~~ 949 (1023)
|++..++|+.+.+.||+|+.....+|..||++.+.++++.+.|.++|+|+|++|.||+|+|++.+..++.+..+.+.
T Consensus 423 ~~t~~~~~~~i~i~i~~g~~~~~~~~~~ig~~~i~~i~~~~~g~~~i~v~f~ld~~Gil~V~~~~~~~~~~~~~~v~--- 499 (602)
T PF00012_consen 423 FKTVTDNQTSISIDIYEGESSSFEDNKKIGSYTISGIPPAPKGKPKIKVTFELDENGILSVEAAEVETGKEEEVTVK--- 499 (602)
T ss_dssp EEESSTTCSEEEEEEEESSSSBGGGSEEEEEEEEES-SSSSTTSSEEEEEEEEETTSEEEEEEEETTTTEEEEEEEE---
T ss_pred cchhccccccccceeeeccccccccccccccccccccccccccccceeeEEeeeeeeehhhhhcccccccccccccc---
Confidence 99999999999999999999999999999999999999999999999999999999999999999877766544333
Q ss_pred ccccccccccccccCcccceEEeeCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHhhccC
Q psy6736 950 GRRYLNVTAIEKSTGKENKITITNDRGRLSKEDIERMVNDAEKYKAEDEKQKAVISAKNSLESYCFNMKSKGR 1022 (1023)
Q Consensus 950 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~ls~eei~~~~~~~~~~~~~d~~~~~~~~akN~lE~~iy~~r~k~~ 1022 (1023)
.... ++++++++++++++++..+|+.+++..+++|+||+|+|++|+++.
T Consensus 500 -----------------------~~~~-~~~~~~~~~~~~~~~~~~~d~~~~~~~e~kn~lE~~i~~~r~~l~ 548 (602)
T PF00012_consen 500 -----------------------KKET-LSKEEIEELKKKLEEMDEEDEERRERAEAKNELESYIYELRDKLE 548 (602)
T ss_dssp -----------------------SSSS-SCHHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred -----------------------cccc-cccccccccccccchhhhhhhhhhhccccHHHHHHHHHHHHHHHH
Confidence 2233 999999999999999999999999999999999999999999874
No 37
>KOG0103|consensus
Probab=100.00 E-value=2.4e-48 Score=433.91 Aligned_cols=384 Identities=30% Similarity=0.518 Sum_probs=328.2
Q ss_pred CCcceEEEEEeCCceEEEEEEEEeCCEEEEEEecCCCCCcHHHHHHHHHHHHHHHHHhhhccCcchhHHHHHHHHHHHHH
Q psy6736 632 SGERNVLIFDLGGGTFDVSILTIEDGIFEVKSTAGDTHLGGEDFDNRMVNHFVQEFKRKYKKDLTTNKRALRRLRTACER 711 (1023)
Q Consensus 632 ~~~~~vlV~D~GggT~dvsi~~~~~~~~~v~~~~gd~~lGG~~~D~~l~~~~~~~~~~~~~~~~~~~~~~~~~L~~~~e~ 711 (1023)
+++++|+++|||++++.+|++.+..|.+.++++.+|.++||++||++|.+||+++|+.+|+++...+++++.||+..||+
T Consensus 193 ekpr~v~fvD~GHS~~q~si~aF~kG~lkvl~ta~D~~lGgr~fDe~L~~hfa~efk~kykidv~sn~kA~lRL~~~~EK 272 (727)
T KOG0103|consen 193 EKPRNVVFVDIGHSSYQVSIAAFTKGKLKVLATAFDRKLGGRDFDEALIDHFAKEFKTKYKIDVRSNAKAKLRLLAECEK 272 (727)
T ss_pred cCcceEEEEecccccceeeeeeeccCcceeeeeecccccccchHHHHHHHHHHHHhccccccchhhchhHHHHHHHHHHH
Confidence 45789999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HhhhcCCCceeEEEEecccCCcceEEEecHHHHHHHHHHHHHHHHHHHHHHHHHcCCCccccceEEEecCccCcHHHHHH
Q psy6736 712 AKRTLSSSTQASIEIDSLFEGVDFYTSITRARFEELNADLFRGTMEPVEKSLRDAKMDKAQIHDIVLVGGSTRIPKVQKL 791 (1023)
Q Consensus 712 ~K~~Ls~~~~~~~~i~~~~~~~~~~~~itr~~~~~~~~~~~~~~~~~i~~~l~~~~~~~~~i~~V~LvGG~srip~v~~~ 791 (1023)
.|+.||++...+.+|++++++.|.+..|+|++|+++|.|+++|+..++.++|+++++..+||+.|.+|||+||+|.|+++
T Consensus 273 lKK~lSAN~~~plNIEcfM~d~dvs~~i~ReEfEel~~plL~rv~~p~~~~l~d~~l~~edi~~VEiVGg~sripaike~ 352 (727)
T KOG0103|consen 273 LKKVLSANTELPLNIECFMNDKDVSSKIKREEFEELSAPLLERVEVPLLKALADAKLKVEDIHAVEIVGGLSRIPAIKEM 352 (727)
T ss_pred HHHHhhcCcCCCcchhheeecchhhhhccHHHHHHHHHHHHHhhhHHHHHHHHHhcCccccceeEEEecCcccchHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHhhcCcccCCCCCCccceecchHHHHHHHhCCCcccccceEEeeccceeeEEEee----C-ceeEEeecCCCCCCcce
Q psy6736 792 LQDFFNGKELNKSINPDEAVAYGAAVQAAILHGDKSEEVQDLLLLDVTPLSLGIETA----G-GVMTALIKRNTTIPTKQ 866 (1023)
Q Consensus 792 l~~~f~~~~~~~~~~p~~aVa~GAa~~a~~l~~~~~~~~~~~~~~d~~~~sigi~~~----~-~~~~~ii~~~~~lP~~~ 866 (1023)
|+++| ++.+.+++|.|+|||+|||+++|++++ .++++.+.+.|+.||+|.+... + +....+||+|.++|.++
T Consensus 353 Is~~F-gke~s~TlN~dEavarG~ALqcAIlSP--~frVRef~v~Di~pysIs~~w~~~~ed~~~~~evF~~~~~~p~~K 429 (727)
T KOG0103|consen 353 ISDFF-GKELSRTLNQDEAVARGAALQCAILSP--TFRVREFSVEDIVPYSISLRWVKQGEDGGSVTEVFPKGHPSPSVK 429 (727)
T ss_pred HHHHh-CCcccccccHHHHHHHhHHHHHHhcCc--cccceecceecccceeEEEEeccccccCCCceeeecCCCCCCCce
Confidence 99999 789999999999999999999999987 6899999999999999988743 2 55578999999999999
Q ss_pred EEEEEeecCCCCcEEEEEee-cCccccccCceeeEEEEecCCCCCC-CCCeEEEEEEECCCccEEEEEEEcccCceee-E
Q psy6736 867 TQTFTTYSDNQPGVLIQVYE-GERAMTKDNNLLGKFELTSIPPAPR-GVPQIEVTFDIDANGILNVTAIEKSTGKENK-I 943 (1023)
Q Consensus 867 ~~~f~~~~~~q~~i~i~iye-g~~~~~~~~~~ig~~~l~~~~~~~~-g~~~i~v~f~id~~gil~V~a~~~~~~~~~~-~ 943 (1023)
..+|.+.. .+.+.++. +....+.....|+++.+.++.+... ...+++|+..++.+|++.|...-.-...+.. +
T Consensus 430 ~lT~~Rk~----~F~lea~yt~~~~lp~~~~kI~~~~i~~v~~~~~ge~skVKvkvr~n~~Gi~~i~sA~~~e~~~veev 505 (727)
T KOG0103|consen 430 LLTFNRKG----PFTLEAKYTKVNKLPYPKPKIEKWTITGVTPSEDGEFSKVKVKVRLNEHGIDTIESATLIEDIEVEEV 505 (727)
T ss_pred EEEEEecC----ceEEEEEeccccccCCCCCceeeEEecccccCccccccceeEEEEEcCccceeeecceeecccchhcc
Confidence 99987742 35555544 4455665668999999998877666 4558999999999999988742221111111 1
Q ss_pred E---eccccccccc--cccccccccCcccceEEeeCCC-CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHH
Q psy6736 944 T---ITNDRGRRYL--NVTAIEKSTGKENKITITNDRG-RLSKEDIERMVNDAEKYKAEDEKQKAVISAKNSLESYCFNM 1017 (1023)
Q Consensus 944 ~---~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~-~ls~eei~~~~~~~~~~~~~d~~~~~~~~akN~lE~~iy~~ 1017 (1023)
. ...+.+.... ...++.|.+.+...+.+..... +|+..+++..++++.+|..+|+...++.++||+||+|||.|
T Consensus 506 ~~~~~e~~~~~~~~~~~~~~~~k~kvk~~~L~~~~~~~~~l~~~~l~~~~e~E~~M~~qD~~~~Et~D~KNaleeyVY~~ 585 (727)
T KOG0103|consen 506 PEEPMEYDDAAKMLERIAPAENKKKVKKVDLPIEAYTKGALITDELELYIEKENKMILQDKLEKETVDAKNALEEYVYDM 585 (727)
T ss_pred ccchhhhhcchhhhhhhccccccceeeeccccceeeeccccCHHHHHHHHHHHHHhhhhhhhhhhhccHHHHHHHHHHHH
Confidence 1 1111111010 1122224445556676666554 79999999999999999999999999999999999999999
Q ss_pred hhccC
Q psy6736 1018 KSKGR 1022 (1023)
Q Consensus 1018 r~k~~ 1022 (1023)
|+||-
T Consensus 586 R~kl~ 590 (727)
T KOG0103|consen 586 RDKLS 590 (727)
T ss_pred HHHhh
Confidence 99973
No 38
>PRK11678 putative chaperone; Provisional
Probab=100.00 E-value=4.7e-46 Score=426.64 Aligned_cols=336 Identities=20% Similarity=0.237 Sum_probs=270.2
Q ss_pred CcccCCCCCeeEEeecccccccceeecccccc-cC-----Cccccce----------------eeEEEeccCeEEee---
Q psy6736 1 MAIIHPDHPEVEITEEQSLLIQTSIMDLIGDN-LG-----QGLIKPA----------------FSGIRLEEGAVMLY--- 55 (1023)
Q Consensus 1 vav~~~~~p~~~~~~~~~~~~~pS~~~~~~~~-~g-----~~~~~ps----------------~v~~~~~~~~~~~G--- 55 (1023)
||+|++++|.+ |++++|.+++||++.+.... .+ ...+.|- -...+.+++.+++|
T Consensus 14 va~~~~~~~~l-i~~~~~~~~~pS~v~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~A 92 (450)
T PRK11678 14 VAVMRDGKPRL-LPLENDSTYLPSTLCAPTREAVSEWLYRHLDVPAYDDERQALLRRAIRYNREEDIDVTAQSVFFGLAA 92 (450)
T ss_pred eEEeeCCceEE-EEcCCCCCcCCeeeeccCchhhhhhhhhhcccCcccchhhhhhhhhhhhcccccccccccccchhHHH
Confidence 68999999999 99999999999998664110 00 0000000 00122245677777
Q ss_pred -------cCCCceeeeeecccCCcCccccccccccCHHHHHhHhhhhccCcchHHHHHHHHHhCCcCCcceEecCCCCC-
Q psy6736 56 -------CSDGYTAGWINSITGDLTPWDGARLKAVSAQELSRGVKAIFTAPDILKKKTSEDILRKVDGQNEGLIPAYFN- 127 (1023)
Q Consensus 56 -------~~~~~~~~~~k~~~g~~~~~~~~~~~~~~~~~v~a~~L~~~~~~~~~l~~~a~~~~~~~~~~~vitVPa~~~- 127 (1023)
+..++.++.||+++|...+.... ...++++++++| ++|++.|+.++|.++.++|||||++|+
T Consensus 93 ~~~~~~~p~~~r~i~s~Kr~lg~~~~~~~~---~~~~e~l~a~iL-------~~lk~~ae~~~g~~v~~~VItvPa~F~~ 162 (450)
T PRK11678 93 LAQYLEDPEEVYFVKSPKSFLGASGLKPQQ---VALFEDLVCAMM-------LHIKQQAEAQLQAAITQAVIGRPVNFQG 162 (450)
T ss_pred HHhhccCCCCceEEecchhhhccCCCCccc---eeCHHHHHHHHH-------HHHHHHHHHHhCCCCCcEEEEECCcccc
Confidence 34455588999999986543332 245999999999 999999999999999999999999998
Q ss_pred ----HHHHHH---HHHHHHHcCCceeeeecchHHHHHHhccccccCccccccCCCCCcEEEEEEeCCceEEEEEEEEeCC
Q psy6736 128 ----ISSVKS---TKDSGTIAGLNVLRIINEPTAAAIAYGLDKKVGSTAVEYNGSGERNVLIFDLGGGTFDVSILTIEDG 200 (1023)
Q Consensus 128 ----~~qr~~---l~~Aa~~AGl~~~~li~Ep~AAal~y~~~~~~~~~~~~~~~~~~~~vlV~D~GggT~dvsv~~~~~~ 200 (1023)
+.||++ |++||+.||+++++|++||+|||++|+.... .+..+||||+||||+|+|++++.++
T Consensus 163 ~~~~~~qr~a~~~l~~Aa~~AG~~~v~li~EPtAAAl~y~~~~~-----------~~~~vlV~D~GGGT~D~Svv~~~~~ 231 (450)
T PRK11678 163 LGGEEANRQAEGILERAAKRAGFKDVEFQFEPVAAGLDFEATLT-----------EEKRVLVVDIGGGTTDCSMLLMGPS 231 (450)
T ss_pred CCcchhHHHHHHHHHHHHHHcCCCEEEEEcCHHHHHHHhccccC-----------CCCeEEEEEeCCCeEEEEEEEecCc
Confidence 788876 6999999999999999999999999986433 5788999999999999999999653
Q ss_pred -------EEEEEEecCCCCccHHHHHHHHH-HHHHHHHHhh----hccCc------------------------------
Q psy6736 201 -------IFEVKSTAGDTHLGGEDFDNRMV-NHFVQEFKRK----YKKDL------------------------------ 238 (1023)
Q Consensus 201 -------~~~v~~~~~~~~lGG~~~D~~l~-~~l~~~~~~~----~~~~~------------------------------ 238 (1023)
..++++++| ..+||+|||..|+ +++...|+.. .+.++
T Consensus 232 ~~~~~~r~~~vla~~G-~~lGG~DfD~~L~~~~~~~~fg~~~~~~~g~~~p~~~~~~~~~~~~i~~~~~~~~~~~~~~~~ 310 (450)
T PRK11678 232 WRGRADRSASLLGHSG-QRIGGNDLDIALAFKQLMPLLGMGSETEKGIALPSLPFWNAVAINDVPAQSDFYSLANGRLLN 310 (450)
T ss_pred ccccCCcceeEEecCC-CCCChHHHHHHHHHHHHHHHhhhchhhccCCcCcchhhhhhhhhhccchhhhhhhhhhHHHHH
Confidence 468999998 6899999999998 6788777521 11110
Q ss_pred -----cccHHHH------------HHHHHHHHHHhHHcCCCCceEEEEecccCCceeEEEecHHHHHHHhHHHHHHHHHH
Q psy6736 239 -----TTNKRAL------------RRLRTACERAKRTLSSSTQASIEIDSLFEGVDFYTSITRARFEELNADLFRGTMEP 301 (1023)
Q Consensus 239 -----~~~~~~~------------~~L~~~ae~~K~~Ls~~~~~~i~i~~~~~~~~~~~~itr~~~e~~~~~~~~~i~~~ 301 (1023)
..+++.+ .+|+.+||++|+.||.+.++.+.++.+. .++..+|||++|+++++++++++..+
T Consensus 311 ~~~~~~~~p~~~~rl~~l~~~~~~~~L~~~aE~aK~~LS~~~~a~i~~~~~~--~~~~~~ItR~efe~ii~~~l~ri~~~ 388 (450)
T PRK11678 311 DLIRDAREPEKVARLLKVWRQRLSYRLVRSAEEAKIALSDQAETRASLDFIS--DGLATEISQQGLEEAISQPLARILEL 388 (450)
T ss_pred HHhhccccHHHHHHHHHHhhhhhhHHHHHHHHHHHHHcCCCCceEEEecccC--CCcceeeCHHHHHHHHHHHHHHHHHH
Confidence 0123233 3688999999999999999999888654 35779999999999999999999999
Q ss_pred HHHHHHHcCCCccCcCeEEEEcCCCCcHHHHHHHHHHcCCccccccCCCchhHHhHHHHHHHHH
Q psy6736 302 VEKSLRDAKMDKAQIHDIVLVGGSTRIPKVQKLLQDFFNGKELNKSINPDEAVAYGAAVQAAIL 365 (1023)
Q Consensus 302 i~~~l~~~~~~~~~i~~V~LvGG~sr~p~v~~~l~~~f~~~~i~~~~~pd~aVa~GAa~~a~~l 365 (1023)
|+++|+++++. ++.|+||||+|++|+|++.|++.||+.++. ..+|.++||.|+|++|..+
T Consensus 389 i~~~L~~a~~~---~d~VvLvGGsSriP~V~~~l~~~fg~~~v~-~g~~~~sVa~Gla~~a~~~ 448 (450)
T PRK11678 389 VQLALDQAQVK---PDVIYLTGGSARSPLIRAALAQQLPGIPIV-GGDDFGSVTAGLARWAQVV 448 (450)
T ss_pred HHHHHHHcCCC---CCEEEEcCcccchHHHHHHHHHHCCCCcEE-eCCCcchHHHHHHHHHHhh
Confidence 99999999976 489999999999999999999999776665 5599999999999999753
No 39
>KOG0104|consensus
Probab=100.00 E-value=5.8e-40 Score=366.67 Aligned_cols=381 Identities=29% Similarity=0.458 Sum_probs=300.8
Q ss_pred CCcceEEEEEeCCceEEEEEEEEe----------CCEEEEEEecCCCCCcHHHHHHHHHHHHHHHHHhhhc--cCcchhH
Q psy6736 632 SGERNVLIFDLGGGTFDVSILTIE----------DGIFEVKSTAGDTHLGGEDFDNRMVNHFVQEFKRKYK--KDLTTNK 699 (1023)
Q Consensus 632 ~~~~~vlV~D~GggT~dvsi~~~~----------~~~~~v~~~~gd~~lGG~~~D~~l~~~~~~~~~~~~~--~~~~~~~ 699 (1023)
...+++||||||.|++.+|++.+. ...++++++++|..|||..|..+|.+|+.+.|.+.++ .+...++
T Consensus 212 ~~~q~~i~YDMGs~sT~Ativsy~~v~~k~~g~~~p~i~~~gvGfd~tLGG~e~~~rLr~~l~~~F~~~~k~~~dv~~np 291 (902)
T KOG0104|consen 212 ETPQHYIFYDMGSGSTSATIVSYQLVKTKEQGGKQPQIQVLGVGFDRTLGGLEMTMRLRDHLANEFNEQHKTKKDVHTNP 291 (902)
T ss_pred CCceEEEEEecCCCceeEEEEEEEeeccccccCccceEEEEeeccCCccchHHHHHHHHHHHHHHHHHhcCCccccccCH
Confidence 345889999999999999999874 2578999999999999999999999999999998776 4678899
Q ss_pred HHHHHHHHHHHHHhhhcCCCceeEEEEecccCCcceEEEecHHHHHHHHHHHHHHHHHHHHHHHHHcCCCccccceEEEe
Q psy6736 700 RALRRLRTACERAKRTLSSSTQASIEIDSLFEGVDFYTSITRARFEELNADLFRGTMEPVEKSLRDAKMDKAQIHDIVLV 779 (1023)
Q Consensus 700 ~~~~~L~~~~e~~K~~Ls~~~~~~~~i~~~~~~~~~~~~itr~~~~~~~~~~~~~~~~~i~~~l~~~~~~~~~i~~V~Lv 779 (1023)
|++++|.++|+++|..||+|..+.+.|+++.+++||...|||++||++|++++.|+..||.++|..++++.++|+.|+|+
T Consensus 292 rAmaKl~keA~R~K~vLSANsea~aqIEsL~ddiDFr~kvTRe~fEelc~Dl~~r~~~Pi~dAl~~a~l~ldeIn~ViL~ 371 (902)
T KOG0104|consen 292 RAMAKLNKEAERLKQVLSANSEAFAQIESLIDDIDFRLKVTREEFEELCADLEERIVEPINDALKKAQLSLDEINQVILF 371 (902)
T ss_pred HHHHHHHHHHHHHHHHhhcchhhHHHHHHHhhccccccceeHHHHHHHHHHHHHhhhhhHHHHHHhcCCChhhhheeEEe
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCccCcHHHHHHHHHhhcCcccCCCCCCccceecchHHHHHHHhCCCcccccceEEeeccceeeEEEeeCc--------e
Q psy6736 780 GGSTRIPKVQKLLQDFFNGKELNKSINPDEAVAYGAAVQAAILHGDKSEEVQDLLLLDVTPLSLGIETAGG--------V 851 (1023)
Q Consensus 780 GG~srip~v~~~l~~~f~~~~~~~~~~p~~aVa~GAa~~a~~l~~~~~~~~~~~~~~d~~~~sigi~~~~~--------~ 851 (1023)
||+||+|.||+.|.++.+..++...+|.|||+++||+++||.|+. +++++++.+.|.+.|+|-++..+. .
T Consensus 372 Gg~TRVP~VQe~l~k~v~~~ei~knlNaDEA~vmGav~~aA~LSk--sFKvKpf~V~D~~~yp~~v~f~~~~~i~~~k~~ 449 (902)
T KOG0104|consen 372 GGATRVPKVQETLIKAVGKEELGKNLNADEAAVMGAVYQAAHLSK--SFKVKPFNVVDASVYPYLVEFETEPGIHALKSV 449 (902)
T ss_pred cCcccCchHHHHHHHHHhHHHHhcccChhHHHHHHHHHHHHhhcc--cccccceeeeecccccEEEEeccCCcccccchh
Confidence 999999999999999998889999999999999999999999975 788999999999999988875432 2
Q ss_pred eEEeecCCCCCCcceEEEEEeecCCCCcEEEEEeecCccccccCceeeEEEEecCCCC----CC---CCCeEEEEEEECC
Q psy6736 852 MTALIKRNTTIPTKQTQTFTTYSDNQPGVLIQVYEGERAMTKDNNLLGKFELTSIPPA----PR---GVPQIEVTFDIDA 924 (1023)
Q Consensus 852 ~~~ii~~~~~lP~~~~~~f~~~~~~q~~i~i~iyeg~~~~~~~~~~ig~~~l~~~~~~----~~---g~~~i~v~f~id~ 924 (1023)
...+|+++.++|.++..+|+..+++ +.+.+--|.-. ..+-.+++.++... +. ....|++.|.+|.
T Consensus 450 ~~~lf~~~~~yPnk~vi~~~~ysdd---f~~~~n~~~~~-----~nl~~velsgV~d~~kk~~~~~~~~KGIk~~F~~D~ 521 (902)
T KOG0104|consen 450 KRDLFARMSPYPNKKVITFTSYSDD---FPFNINYGDLG-----QNLTTVELSGVKDALKKNSYSDSESKGIKASFSLDL 521 (902)
T ss_pred HHHHHhcCCcCCCcceeeccccCCc---cccccchhhhc-----cCccEEEEecchHHHHhcccchhhccCceEEEEEcC
Confidence 2348999999999987888776554 33332222110 22336677655422 11 2346999999999
Q ss_pred CccEEEEEEEcccCc--------eeeEE--e--------cc-ccc--c--------ccc---------cccccccccCc-
Q psy6736 925 NGILNVTAIEKSTGK--------ENKIT--I--------TN-DRG--R--------RYL---------NVTAIEKSTGK- 965 (1023)
Q Consensus 925 ~gil~V~a~~~~~~~--------~~~~~--~--------~~-~~~--~--------~~~---------~~~~~~~~~~~- 965 (1023)
+|++.|+..+.-+.+ +.... . .. ++. + ... .......++.+
T Consensus 522 Sgi~~v~~~evv~e~~~~~d~~~~~st~~K~~~~~e~e~~~~~~~~~e~ae~k~~ep~e~se~~ee~~~d~s~e~k~e~~ 601 (902)
T KOG0104|consen 522 SGIVLVSRVEVVFEKQKEEDSGDKKSTLSKLGSTSEGEETSDDSVQEEDAEEKGLEPSERSELEEEAEEDASQEDKTEKE 601 (902)
T ss_pred cCceEEeeeeEEEeccCCcccchhhhhhhccccccccccccccccchhhhhhhccCcccccccccccccccccccccccc
Confidence 999998865432211 00000 0 00 000 0 000 00000000000
Q ss_pred -------------c----cceEEeeC---CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHhhccC
Q psy6736 966 -------------E----NKITITND---RGRLSKEDIERMVNDAEKYKAEDEKQKAVISAKNSLESYCFNMKSKGR 1022 (1023)
Q Consensus 966 -------------~----~~~~~~~~---~~~ls~eei~~~~~~~~~~~~~d~~~~~~~~akN~lE~~iy~~r~k~~ 1022 (1023)
. ..+.|+.. .+.|++..++....+++.+.++|+.+.++++|.|.||+|+|++.+++-
T Consensus 602 t~e~~~~~~~~~~~~p~~~~~~i~~~~~~~~~l~~~~~~~~~~kl~d~~~~e~~k~~re~a~N~LE~~l~e~q~~l~ 678 (902)
T KOG0104|consen 602 TSEAQKPTEKKETPAPMVVRLQIQETYPDLPVLNENALDAAVAKLEDFVQKEKEKSEREEASNELEAFLFELQDKLD 678 (902)
T ss_pred chhccCcchhhcccCcceeEeeeeeecccccCCchhHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHhc
Confidence 0 11333322 236999999999999999999999999999999999999999999863
No 40
>PRK13928 rod shape-determining protein Mbl; Provisional
Probab=100.00 E-value=1.6e-32 Score=308.83 Aligned_cols=288 Identities=18% Similarity=0.266 Sum_probs=219.5
Q ss_pred ccceeeEEEeccCeE-EeecCCCceeeeeecccCCcCccccccccccCHHHHHhHhhhhccCcchHHHHHHHHHhCCcCC
Q psy6736 38 IKPAFSGIRLEEGAV-MLYCSDGYTAGWINSITGDLTPWDGARLKAVSAQELSRGVKAIFTAPDILKKKTSEDILRKVDG 116 (1023)
Q Consensus 38 ~~ps~v~~~~~~~~~-~~G~~~~~~~~~~k~~~g~~~~~~~~~~~~~~~~~v~a~~L~~~~~~~~~l~~~a~~~~~~~~~ 116 (1023)
-.||+++++.+.+.+ .+|..... ...+..+...+..+...+.+...++.+.+| +++++.+.........
T Consensus 27 ~~psvv~~~~~~~~i~~vG~~A~~---~~~~~p~~~~~~~pi~~G~i~d~~~~~~~l-------~~~~~~~~~~~~~~~p 96 (336)
T PRK13928 27 NEPSVVAIDKNTNKVLAVGEEARR---MVGRTPGNIVAIRPLRDGVIADYDVTEKML-------KYFINKACGKRFFSKP 96 (336)
T ss_pred ccCCEEEEECCCCeEEEecHHHHH---hhhcCCCCEEEEccCCCCeEecHHHHHHHH-------HHHHHHHhccCCCCCC
Confidence 368888888333444 55633111 111111221122233445677777878888 8888665433233445
Q ss_pred cceEecCCCCCHHHHHHHHHHHHHcCCceeeeecchHHHHHHhccccccCccccccCCCCCcEEEEEEeCCceEEEEEEE
Q psy6736 117 QNEGLIPAYFNISSVKSTKDSGTIAGLNVLRIINEPTAAAIAYGLDKKVGSTAVEYNGSGERNVLIFDLGGGTFDVSILT 196 (1023)
Q Consensus 117 ~~vitVPa~~~~~qr~~l~~Aa~~AGl~~~~li~Ep~AAal~y~~~~~~~~~~~~~~~~~~~~vlV~D~GggT~dvsv~~ 196 (1023)
.+|||||++|++.||+++++|++.||++++.+++||+|||++|+.... ++..++|||+||||||+++++
T Consensus 97 ~~vitvP~~~~~~~r~~~~~a~~~ag~~~~~li~ep~Aaa~~~g~~~~-----------~~~~~lVvDiGggttdvsvv~ 165 (336)
T PRK13928 97 RIMICIPTGITSVEKRAVREAAEQAGAKKVYLIEEPLAAAIGAGLDIS-----------QPSGNMVVDIGGGTTDIAVLS 165 (336)
T ss_pred eEEEEeCCCCCHHHHHHHHHHHHHcCCCceEecccHHHHHHHcCCccc-----------CCCeEEEEEeCCCeEEEEEEE
Confidence 799999999999999999999999999999999999999999987543 466799999999999999999
Q ss_pred EeCCEEEEEEecCCCCccHHHHHHHHHHHHHHHHHhhhccCccccHHHHHHHHHHHHHHhHHcCCCC----ceEEEEe--
Q psy6736 197 IEDGIFEVKSTAGDTHLGGEDFDNRMVNHFVQEFKRKYKKDLTTNKRALRRLRTACERAKRTLSSST----QASIEID-- 270 (1023)
Q Consensus 197 ~~~~~~~v~~~~~~~~lGG~~~D~~l~~~l~~~~~~~~~~~~~~~~~~~~~L~~~ae~~K~~Ls~~~----~~~i~i~-- 270 (1023)
.+... ..++..+||.+||+.|++++..+|+...+ ...||++|+.++... ...+.+.
T Consensus 166 ~g~~~-----~~~~~~lGG~did~~i~~~l~~~~~~~~~-------------~~~ae~lK~~~~~~~~~~~~~~~~v~g~ 227 (336)
T PRK13928 166 LGGIV-----TSSSIKVAGDKFDEAIIRYIRKKYKLLIG-------------ERTAEEIKIKIGTAFPGAREEEMEIRGR 227 (336)
T ss_pred eCCEE-----EeCCcCCHHHHHHHHHHHHHHHHhchhcC-------------HHHHHHHHHHhcccccccCCcEEEEecc
Confidence 85322 24578999999999999999987752211 247999999987532 1233332
Q ss_pred cccCCceeEEEecHHHHHHHhHHHHHHHHHHHHHHHHHcC--CCccCcC-eEEEEcCCCCcHHHHHHHHHHcCCcccccc
Q psy6736 271 SLFEGVDFYTSITRARFEELNADLFRGTMEPVEKSLRDAK--MDKAQIH-DIVLVGGSTRIPKVQKLLQDFFNGKELNKS 347 (1023)
Q Consensus 271 ~~~~~~~~~~~itr~~~e~~~~~~~~~i~~~i~~~l~~~~--~~~~~i~-~V~LvGG~sr~p~v~~~l~~~f~~~~i~~~ 347 (1023)
.+..+.+..++|+|++|++++.++++++.+.|.+.|+.++ +....++ .|+|+||+|++|.|++.|++.| +.++...
T Consensus 228 ~~~~~~~~~~~i~~~~~~eii~~~~~~i~~~i~~~l~~~~~~~~~~~i~~~IvL~GG~s~ipgi~e~l~~~~-~~~v~~~ 306 (336)
T PRK13928 228 DLVTGLPKTITVTSEEIREALKEPVSAIVQAVKSVLERTPPELSADIIDRGIIMTGGGALLHGLDKLLAEET-KVPVYIA 306 (336)
T ss_pred cccCCCceEEEECHHHHHHHHHHHHHHHHHHHHHHHHhCCccccHhhcCCCEEEECcccchhhHHHHHHHHH-CCCceec
Confidence 2344566789999999999999999999999999999986 4456677 7999999999999999999999 6788888
Q ss_pred CCCchhHHhHHHHHHHHH
Q psy6736 348 INPDEAVAYGAAVQAAIL 365 (1023)
Q Consensus 348 ~~pd~aVa~GAa~~a~~l 365 (1023)
.||++|||+|||+++..+
T Consensus 307 ~~P~~ava~Gaa~~~~~~ 324 (336)
T PRK13928 307 EDPISCVALGTGKMLENI 324 (336)
T ss_pred CCHHHHHHHHHHHHHhch
Confidence 899999999999998764
No 41
>PRK13929 rod-share determining protein MreBH; Provisional
Probab=100.00 E-value=1.5e-31 Score=299.76 Aligned_cols=284 Identities=16% Similarity=0.268 Sum_probs=219.9
Q ss_pred cceeeEEEeccCe-EEeecCCCceeeeeecccCCcCccccccccccCHHHHHhHhhhhccCcchHHHHHHHHHhCCcCC-
Q psy6736 39 KPAFSGIRLEEGA-VMLYCSDGYTAGWINSITGDLTPWDGARLKAVSAQELSRGVKAIFTAPDILKKKTSEDILRKVDG- 116 (1023)
Q Consensus 39 ~ps~v~~~~~~~~-~~~G~~~~~~~~~~k~~~g~~~~~~~~~~~~~~~~~v~a~~L~~~~~~~~~l~~~a~~~~~~~~~- 116 (1023)
.||+++++.+++. +.+|... .....+..+.-....+.+.+.+..-++++.+| ++++..++..++..+.
T Consensus 29 ~ps~va~~~~~~~~~~vG~~A---~~~~~~~p~~~~~~~pi~~G~I~d~d~~~~~l-------~~~~~~~~~~l~~~~~~ 98 (335)
T PRK13929 29 EPSVVAVDTETKAVLAIGTEA---KNMIGKTPGKIVAVRPMKDGVIADYDMTTDLL-------KQIMKKAGKNIGMTFRK 98 (335)
T ss_pred CCcEEEEECCCCeEEEeCHHH---HHhhhcCCCcEEEEecCCCCccCCHHHHHHHH-------HHHHHHHHHhcCCCCCC
Confidence 5888888733333 5666221 11111112221122233344566668889999 9999999888886654
Q ss_pred -cceEecCCCCCHHHHHHHHHHHHHcCCceeeeecchHHHHHHhccccccCccccccCCCCCcEEEEEEeCCceEEEEEE
Q psy6736 117 -QNEGLIPAYFNISSVKSTKDSGTIAGLNVLRIINEPTAAAIAYGLDKKVGSTAVEYNGSGERNVLIFDLGGGTFDVSIL 195 (1023)
Q Consensus 117 -~~vitVPa~~~~~qr~~l~~Aa~~AGl~~~~li~Ep~AAal~y~~~~~~~~~~~~~~~~~~~~vlV~D~GggT~dvsv~ 195 (1023)
.+|||||++|++.||+++.+|++.||++++.+++||+|||++|+.... ++..++|+|+||||||++++
T Consensus 99 ~~vvitvP~~~~~~~R~~l~~a~~~ag~~~~~li~ep~Aaa~~~g~~~~-----------~~~~~lvvDiG~gtt~v~vi 167 (335)
T PRK13929 99 PNVVVCTPSGSTAVERRAISDAVKNCGAKNVHLIEEPVAAAIGADLPVD-----------EPVANVVVDIGGGTTEVAII 167 (335)
T ss_pred CeEEEEcCCCCCHHHHHHHHHHHHHcCCCeeEeecCHHHHHHhcCCCcC-----------CCceEEEEEeCCCeEEEEEE
Confidence 799999999999999999999999999999999999999999987543 56789999999999999999
Q ss_pred EEeCCEEEEEEecCCCCccHHHHHHHHHHHHHHHHHhhhccCccccHHHHHHHHHHHHHHhHHcCCCC----ceEEEEe-
Q psy6736 196 TIEDGIFEVKSTAGDTHLGGEDFDNRMVNHFVQEFKRKYKKDLTTNKRALRRLRTACERAKRTLSSST----QASIEID- 270 (1023)
Q Consensus 196 ~~~~~~~~v~~~~~~~~lGG~~~D~~l~~~l~~~~~~~~~~~~~~~~~~~~~L~~~ae~~K~~Ls~~~----~~~i~i~- 270 (1023)
++++.. ..++..+||.+||+.|.+++.+.|. ... . ...||++|+.++... ...+.+.
T Consensus 168 ~~~~~~-----~~~~~~~GG~~id~~l~~~l~~~~~----~~~--~-------~~~AE~iK~~l~~~~~~~~~~~~~v~g 229 (335)
T PRK13929 168 SFGGVV-----SCHSIRIGGDQLDEDIVSFVRKKYN----LLI--G-------ERTAEQVKMEIGYALIEHEPETMEVRG 229 (335)
T ss_pred EeCCEE-----EecCcCCHHHHHHHHHHHHHHHHhC----cCc--C-------HHHHHHHHHHHcCCCCCCCCceEEEeC
Confidence 875422 2456789999999999999987653 111 1 247999999998632 2223332
Q ss_pred -cccCCceeEEEecHHHHHHHhHHHHHHHHHHHHHHHHHcCCC--ccCcC-eEEEEcCCCCcHHHHHHHHHHcCCccccc
Q psy6736 271 -SLFEGVDFYTSITRARFEELNADLFRGTMEPVEKSLRDAKMD--KAQIH-DIVLVGGSTRIPKVQKLLQDFFNGKELNK 346 (1023)
Q Consensus 271 -~~~~~~~~~~~itr~~~e~~~~~~~~~i~~~i~~~l~~~~~~--~~~i~-~V~LvGG~sr~p~v~~~l~~~f~~~~i~~ 346 (1023)
++..+.+..+++++++|++++.+++.++.+.|.+.|++++.. ...++ .|+|+||+|++|.++++|++.| +.++..
T Consensus 230 ~~~~~~~p~~i~i~~~~~~~~i~~~l~~i~~~i~~~L~~~~~~l~~~~~~~gIvLtGG~s~lpgl~e~l~~~~-~~~v~~ 308 (335)
T PRK13929 230 RDLVTGLPKTITLESKEIQGAMRESLLHILEAIRATLEDCPPELSGDIVDRGVILTGGGALLNGIKEWLSEEI-VVPVHV 308 (335)
T ss_pred CccCCCCCeEEEEcHHHHHHHHHHHHHHHHHHHHHHHHhCCcccchhhcCCCEEEEchhhhhhhHHHHHHHHH-CCCcee
Confidence 233455678999999999999999999999999999998643 35677 6999999999999999999999 678888
Q ss_pred cCCCchhHHhHHHHHH
Q psy6736 347 SINPDEAVAYGAAVQA 362 (1023)
Q Consensus 347 ~~~pd~aVa~GAa~~a 362 (1023)
..||+++||.||+..-
T Consensus 309 ~~~P~~~Va~Ga~~~~ 324 (335)
T PRK13929 309 AANPLESVAIGTGRSL 324 (335)
T ss_pred CCCHHHHHHHHHHHHH
Confidence 8899999999999774
No 42
>PRK13927 rod shape-determining protein MreB; Provisional
Probab=99.97 E-value=1.1e-29 Score=286.39 Aligned_cols=288 Identities=19% Similarity=0.302 Sum_probs=210.5
Q ss_pred cccceeeEEEeccCe-EEeecCCCceeeeeecccCCcCccccccccccCHHHHHhHhhhhccCcchHHHHHHHHHhCCcC
Q psy6736 37 LIKPAFSGIRLEEGA-VMLYCSDGYTAGWINSITGDLTPWDGARLKAVSAQELSRGVKAIFTAPDILKKKTSEDILRKVD 115 (1023)
Q Consensus 37 ~~~ps~v~~~~~~~~-~~~G~~~~~~~~~~k~~~g~~~~~~~~~~~~~~~~~v~a~~L~~~~~~~~~l~~~a~~~~~~~~ 115 (1023)
...||++++....+. +.+|...... ..+..+.-.+..+.+.+.+..-+.+..+| ++++........ .-
T Consensus 28 ~~~ps~v~~~~~~~~~~~vG~~a~~~---~~~~~~~~~~~~pi~~G~i~d~~~~~~ll-------~~~~~~~~~~~~-~~ 96 (334)
T PRK13927 28 LNEPSVVAIRTDTKKVLAVGEEAKQM---LGRTPGNIVAIRPMKDGVIADFDVTEKML-------KYFIKKVHKNFR-PS 96 (334)
T ss_pred EecCCEEEEECCCCeEEEecHHHHHH---hhcCCCCEEEEecCCCCeecCHHHHHHHH-------HHHHHHHhhccC-CC
Confidence 358899998733233 5677221000 00000111111122223333344555566 676665544322 22
Q ss_pred CcceEecCCCCCHHHHHHHHHHHHHcCCceeeeecchHHHHHHhccccccCccccccCCCCCcEEEEEEeCCceEEEEEE
Q psy6736 116 GQNEGLIPAYFNISSVKSTKDSGTIAGLNVLRIINEPTAAAIAYGLDKKVGSTAVEYNGSGERNVLIFDLGGGTFDVSIL 195 (1023)
Q Consensus 116 ~~~vitVPa~~~~~qr~~l~~Aa~~AGl~~~~li~Ep~AAal~y~~~~~~~~~~~~~~~~~~~~vlV~D~GggT~dvsv~ 195 (1023)
..+|+|||++|++.||+++++|++.||++.+.+++||+|||++|+.... ++..++|||+||||||++++
T Consensus 97 ~~~vi~vP~~~~~~~r~~~~~a~~~ag~~~~~li~ep~aaa~~~g~~~~-----------~~~~~lvvDiGggttdvs~v 165 (334)
T PRK13927 97 PRVVICVPSGITEVERRAVRESALGAGAREVYLIEEPMAAAIGAGLPVT-----------EPTGSMVVDIGGGTTEVAVI 165 (334)
T ss_pred CcEEEEeCCCCCHHHHHHHHHHHHHcCCCeeccCCChHHHHHHcCCccc-----------CCCeEEEEEeCCCeEEEEEE
Confidence 4899999999999999999999999999999999999999999987543 45678999999999999999
Q ss_pred EEeCCEEEEEEecCCCCccHHHHHHHHHHHHHHHHHhhhccCccccHHHHHHHHHHHHHHhHHcCCCCc----eEEEE--
Q psy6736 196 TIEDGIFEVKSTAGDTHLGGEDFDNRMVNHFVQEFKRKYKKDLTTNKRALRRLRTACERAKRTLSSSTQ----ASIEI-- 269 (1023)
Q Consensus 196 ~~~~~~~~v~~~~~~~~lGG~~~D~~l~~~l~~~~~~~~~~~~~~~~~~~~~L~~~ae~~K~~Ls~~~~----~~i~i-- 269 (1023)
+..+.. ..++..+||.+||+.|.+++.+++.. .. . ...||++|+.++.... ..+.+
T Consensus 166 ~~~~~~-----~~~~~~lGG~~id~~l~~~l~~~~~~----~~--~-------~~~ae~iK~~~~~~~~~~~~~~~~~~~ 227 (334)
T PRK13927 166 SLGGIV-----YSKSVRVGGDKFDEAIINYVRRNYNL----LI--G-------ERTAERIKIEIGSAYPGDEVLEMEVRG 227 (334)
T ss_pred ecCCeE-----eeCCcCChHHHHHHHHHHHHHHHhCc----Cc--C-------HHHHHHHHHHhhccCCCCCCceEEEeC
Confidence 885432 24557899999999999999876641 11 1 2368999999875432 22333
Q ss_pred ecccCCceeEEEecHHHHHHHhHHHHHHHHHHHHHHHHHcCCC--ccCcC-eEEEEcCCCCcHHHHHHHHHHcCCccccc
Q psy6736 270 DSLFEGVDFYTSITRARFEELNADLFRGTMEPVEKSLRDAKMD--KAQIH-DIVLVGGSTRIPKVQKLLQDFFNGKELNK 346 (1023)
Q Consensus 270 ~~~~~~~~~~~~itr~~~e~~~~~~~~~i~~~i~~~l~~~~~~--~~~i~-~V~LvGG~sr~p~v~~~l~~~f~~~~i~~ 346 (1023)
+.+..+.+..++|+|++|++++.+.++++.+.|.++|++++.. ...++ .|+|+||+|++|.++++|++.| +.++..
T Consensus 228 ~~~~~~~~~~~~i~~~~~~e~i~~~~~~i~~~i~~~l~~~~~~~~~~~~~~~IvL~GG~s~ipgl~~~l~~~~-~~~v~~ 306 (334)
T PRK13927 228 RDLVTGLPKTITISSNEIREALQEPLSAIVEAVKVALEQTPPELAADIVDRGIVLTGGGALLRGLDKLLSEET-GLPVHV 306 (334)
T ss_pred cccCCCCCeEEEECHHHHHHHHHHHHHHHHHHHHHHHHHCCchhhhhhhcCCEEEECchhhhhHHHHHHHHHH-CCCcEe
Confidence 2334556678899999999999999999999999999998643 22334 5999999999999999999999 678888
Q ss_pred cCCCchhHHhHHHHHHHHH
Q psy6736 347 SINPDEAVAYGAAVQAAIL 365 (1023)
Q Consensus 347 ~~~pd~aVa~GAa~~a~~l 365 (1023)
..||+++||+||++++..+
T Consensus 307 ~~~P~~ava~Ga~~~~~~~ 325 (334)
T PRK13927 307 AEDPLTCVARGTGKALENI 325 (334)
T ss_pred cCCHHHHHHHHHHHHHhhH
Confidence 8899999999999998653
No 43
>TIGR00904 mreB cell shape determining protein, MreB/Mrl family. A close homolog is found in the Archaeon Methanobacterium thermoautotrophicum, and a more distant homolog in Archaeoglobus fulgidus. The family is related to cell division protein FtsA and heat shock protein DnaK.
Probab=99.97 E-value=8.8e-29 Score=278.42 Aligned_cols=247 Identities=22% Similarity=0.312 Sum_probs=192.6
Q ss_pred cccCHHHHHhHhhhhccCcchHHHHHHHHHhCCcCCcceEecCCCCCHHHHHHHHHHHHHcCCceeeeecchHHHHHHhc
Q psy6736 81 KAVSAQELSRGVKAIFTAPDILKKKTSEDILRKVDGQNEGLIPAYFNISSVKSTKDSGTIAGLNVLRIINEPTAAAIAYG 160 (1023)
Q Consensus 81 ~~~~~~~v~a~~L~~~~~~~~~l~~~a~~~~~~~~~~~vitVPa~~~~~qr~~l~~Aa~~AGl~~~~li~Ep~AAal~y~ 160 (1023)
+.+..-+.+..++ ++++.......+.....+|+|||++|+..||+++++|++.||++.+.+++||+|||++|+
T Consensus 71 G~i~d~~~~~~~~-------~~~l~~~~~~~~~~~~~~vitvP~~~~~~~r~~~~~~~~~ag~~~~~li~ep~aaa~~~g 143 (333)
T TIGR00904 71 GVIADFEVTEKMI-------KYFIKQVHSRKSFFKPRIVICVPSGITPVERRAVKESALSAGAREVYLIEEPMAAAIGAG 143 (333)
T ss_pred CEEEcHHHHHHHH-------HHHHHHHhcccccCCCcEEEEeCCCCCHHHHHHHHHHHHHcCCCeEEEecCHHHHHHhcC
Confidence 3444445555566 676665543333233489999999999999999999999999999999999999999998
Q ss_pred cccccCccccccCCCCCcEEEEEEeCCceEEEEEEEEeCCEEEEEEecCCCCccHHHHHHHHHHHHHHHHHhhhccCccc
Q psy6736 161 LDKKVGSTAVEYNGSGERNVLIFDLGGGTFDVSILTIEDGIFEVKSTAGDTHLGGEDFDNRMVNHFVQEFKRKYKKDLTT 240 (1023)
Q Consensus 161 ~~~~~~~~~~~~~~~~~~~vlV~D~GggT~dvsv~~~~~~~~~v~~~~~~~~lGG~~~D~~l~~~l~~~~~~~~~~~~~~ 240 (1023)
.... ++..++|||+||||||+++++..+.. ..++..+||++||+.|++++.++|. ....
T Consensus 144 ~~~~-----------~~~~~lVvDiG~gttdvs~v~~~~~~-----~~~~~~lGG~did~~l~~~l~~~~~----~~~~- 202 (333)
T TIGR00904 144 LPVE-----------EPTGSMVVDIGGGTTEVAVISLGGIV-----VSRSIRVGGDEFDEAIINYIRRTYN----LLIG- 202 (333)
T ss_pred Cccc-----------CCceEEEEEcCCCeEEEEEEEeCCEE-----ecCCccchHHHHHHHHHHHHHHHhc----ccCC-
Confidence 6543 45678999999999999999885432 2456789999999999999987653 1111
Q ss_pred cHHHHHHHHHHHHHHhHHcCCCCc-----eEEEEec--ccCCceeEEEecHHHHHHHhHHHHHHHHHHHHHHHHHcCCCc
Q psy6736 241 NKRALRRLRTACERAKRTLSSSTQ-----ASIEIDS--LFEGVDFYTSITRARFEELNADLFRGTMEPVEKSLRDAKMDK 313 (1023)
Q Consensus 241 ~~~~~~~L~~~ae~~K~~Ls~~~~-----~~i~i~~--~~~~~~~~~~itr~~~e~~~~~~~~~i~~~i~~~l~~~~~~~ 313 (1023)
+..||++|+.++.... ..+.+.. ...+......+++++|.+++.+.++++.+.+.+.|+.++...
T Consensus 203 --------~~~ae~lK~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~e~i~~~~~~i~~~i~~~l~~~~~~~ 274 (333)
T TIGR00904 203 --------EQTAERIKIEIGSAYPLNDEPRKMEVRGRDLVTGLPRTIEITSVEVREALQEPVNQIVEAVKRTLEKTPPEL 274 (333)
T ss_pred --------HHHHHHHHHHHhccccccccccceeecCccccCCCCeEEEECHHHHHHHHHHHHHHHHHHHHHHHHhCCchh
Confidence 2478999999976322 1222211 122334567899999999999999999999999999887542
Q ss_pred -cCc-C-eEEEEcCCCCcHHHHHHHHHHcCCccccccCCCchhHHhHHHHHHHH
Q psy6736 314 -AQI-H-DIVLVGGSTRIPKVQKLLQDFFNGKELNKSINPDEAVAYGAAVQAAI 364 (1023)
Q Consensus 314 -~~i-~-~V~LvGG~sr~p~v~~~l~~~f~~~~i~~~~~pd~aVa~GAa~~a~~ 364 (1023)
.++ + .|+|+||+|++|.++++|++.| +.++....||+++||.||++++..
T Consensus 275 ~~~l~~~~IvL~GGss~ipgl~e~l~~~~-~~~v~~~~~P~~~va~Ga~~~~~~ 327 (333)
T TIGR00904 275 AADIVERGIVLTGGGALLRNLDKLLSKET-GLPVIVADDPLLCVAKGTGKALED 327 (333)
T ss_pred hhhhccCCEEEECcccchhhHHHHHHHHH-CCCceecCChHHHHHHHHHHHHhC
Confidence 244 3 6999999999999999999999 688888899999999999998754
No 44
>PRK13930 rod shape-determining protein MreB; Provisional
Probab=99.96 E-value=4.7e-28 Score=273.71 Aligned_cols=288 Identities=19% Similarity=0.260 Sum_probs=212.4
Q ss_pred ccceeeEEEeccC-eEEeecCCCceeeeeecccCCcCccccccccccCHHHHHhHhhhhccCcchHHHHHHHHHhCCcCC
Q psy6736 38 IKPAFSGIRLEEG-AVMLYCSDGYTAGWINSITGDLTPWDGARLKAVSAQELSRGVKAIFTAPDILKKKTSEDILRKVDG 116 (1023)
Q Consensus 38 ~~ps~v~~~~~~~-~~~~G~~~~~~~~~~k~~~g~~~~~~~~~~~~~~~~~v~a~~L~~~~~~~~~l~~~a~~~~~~~~~ 116 (1023)
..||+|++...++ .+.+|....... .+..+.-.+..+.+.+.+..-+....+| +++++.+.........
T Consensus 32 ~~ps~v~~~~~~~~~~~vG~~A~~~~---~~~~~~~~~~~pi~~G~i~d~~~~e~ll-------~~~~~~~~~~~~~~~~ 101 (335)
T PRK13930 32 NEPSVVAIDTKTGKVLAVGEEAKEML---GRTPGNIEAIRPLKDGVIADFEATEAML-------RYFIKKARGRRFFRKP 101 (335)
T ss_pred ecCCEEEEECCCCeEEEEcHHHHHhh---hcCCCCeEEeecCCCCeEcCHHHHHHHH-------HHHHHHHhhcccCCCC
Confidence 3699999873233 467772210000 0000000111122223444445667777 8888777654455567
Q ss_pred cceEecCCCCCHHHHHHHHHHHHHcCCceeeeecchHHHHHHhccccccCccccccCCCCCcEEEEEEeCCceEEEEEEE
Q psy6736 117 QNEGLIPAYFNISSVKSTKDSGTIAGLNVLRIINEPTAAAIAYGLDKKVGSTAVEYNGSGERNVLIFDLGGGTFDVSILT 196 (1023)
Q Consensus 117 ~~vitVPa~~~~~qr~~l~~Aa~~AGl~~~~li~Ep~AAal~y~~~~~~~~~~~~~~~~~~~~vlV~D~GggT~dvsv~~ 196 (1023)
.+|+|+|++|+..||+++.+|++.+|++.+.+++||+|||++|+.... .+..++|||+||||||++++.
T Consensus 102 ~vvit~P~~~~~~~r~~~~~~~e~~g~~~~~lv~ep~AAa~a~g~~~~-----------~~~~~lVvDiG~gttdvs~v~ 170 (335)
T PRK13930 102 RIVICVPSGITEVERRAVREAAEHAGAREVYLIEEPMAAAIGAGLPVT-----------EPVGNMVVDIGGGTTEVAVIS 170 (335)
T ss_pred cEEEEECCCCCHHHHHHHHHHHHHcCCCeEEecccHHHHHHhcCCCcC-----------CCCceEEEEeCCCeEEEEEEE
Confidence 899999999999999999999999999999999999999999986543 345679999999999999998
Q ss_pred EeCCEEEEEEecCCCCccHHHHHHHHHHHHHHHHHhhhccCccccHHHHHHHHHHHHHHhHHcCCCCc----eEEEEe--
Q psy6736 197 IEDGIFEVKSTAGDTHLGGEDFDNRMVNHFVQEFKRKYKKDLTTNKRALRRLRTACERAKRTLSSSTQ----ASIEID-- 270 (1023)
Q Consensus 197 ~~~~~~~v~~~~~~~~lGG~~~D~~l~~~l~~~~~~~~~~~~~~~~~~~~~L~~~ae~~K~~Ls~~~~----~~i~i~-- 270 (1023)
.+... ..+...+||.+||+.|.+++.+++. .... ...||++|+.++.... ..+.+.
T Consensus 171 ~g~~~-----~~~~~~lGG~~id~~l~~~l~~~~~----~~~~---------~~~ae~~K~~~~~~~~~~~~~~~~~~~~ 232 (335)
T PRK13930 171 LGGIV-----YSESIRVAGDEMDEAIVQYVRRKYN----LLIG---------ERTAEEIKIEIGSAYPLDEEESMEVRGR 232 (335)
T ss_pred eCCEE-----eecCcCchhHHHHHHHHHHHHHHhC----CCCC---------HHHHHHHHHHhhcCcCCCCCceEEEECc
Confidence 75422 2456889999999999999987653 1111 1478999999976432 123332
Q ss_pred cccCCceeEEEecHHHHHHHhHHHHHHHHHHHHHHHHHcCCC--ccCcCe-EEEEcCCCCcHHHHHHHHHHcCCcccccc
Q psy6736 271 SLFEGVDFYTSITRARFEELNADLFRGTMEPVEKSLRDAKMD--KAQIHD-IVLVGGSTRIPKVQKLLQDFFNGKELNKS 347 (1023)
Q Consensus 271 ~~~~~~~~~~~itr~~~e~~~~~~~~~i~~~i~~~l~~~~~~--~~~i~~-V~LvGG~sr~p~v~~~l~~~f~~~~i~~~ 347 (1023)
....+.+..+.|++++|++++.+.++++.+.+.+.|+.+... ...++. |+|+||+|++|.++++|++.| +.++...
T Consensus 233 ~~~~~~~~~~~i~~~~~~e~i~~~~~~i~~~i~~~l~~~~~~~~~~~~~~~IvL~GG~s~ipg~~~~l~~~~-~~~v~~~ 311 (335)
T PRK13930 233 DLVTGLPKTIEISSEEVREALAEPLQQIVEAVKSVLEKTPPELAADIIDRGIVLTGGGALLRGLDKLLSEET-GLPVHIA 311 (335)
T ss_pred cCCCCCCeeEEECHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHhhHHHhCCEEEECchhcchhHHHHHHHHH-CCCceec
Confidence 223445567899999999999999999999999999987533 233454 999999999999999999999 5778888
Q ss_pred CCCchhHHhHHHHHHHHH
Q psy6736 348 INPDEAVAYGAAVQAAIL 365 (1023)
Q Consensus 348 ~~pd~aVa~GAa~~a~~l 365 (1023)
.+|+++||.||++.+...
T Consensus 312 ~~p~~ava~Ga~~~~~~~ 329 (335)
T PRK13930 312 EDPLTCVARGTGKALENL 329 (335)
T ss_pred CCHHHHHHHHHHHHHhCh
Confidence 899999999999998643
No 45
>TIGR02529 EutJ ethanolamine utilization protein EutJ family protein.
Probab=99.96 E-value=2.2e-28 Score=259.36 Aligned_cols=209 Identities=22% Similarity=0.237 Sum_probs=178.7
Q ss_pred cccccccCHHHHHhHhhhhccCcchHHHHHHHHHhCCcCCcceEecCCCCCHHHHHHHHHHHHHcCCceeeeecchHHHH
Q psy6736 77 GARLKAVSAQELSRGVKAIFTAPDILKKKTSEDILRKVDGQNEGLIPAYFNISSVKSTKDSGTIAGLNVLRIINEPTAAA 156 (1023)
Q Consensus 77 ~~~~~~~~~~~v~a~~L~~~~~~~~~l~~~a~~~~~~~~~~~vitVPa~~~~~qr~~l~~Aa~~AGl~~~~li~Ep~AAa 156 (1023)
...++.+...+.++++| +++++.++.+++.++.++|||||++|++.||+++.+|++.||++++.+++||.|||
T Consensus 30 ~~~~g~I~d~~~~~~~l-------~~l~~~a~~~~g~~~~~vvisVP~~~~~~~r~a~~~a~~~aGl~~~~li~ep~Aaa 102 (239)
T TIGR02529 30 VVRDGIVVDFLGAVEIV-------RRLKDTLEQKLGIELTHAATAIPPGTIEGDPKVIVNVIESAGIEVLHVLDEPTAAA 102 (239)
T ss_pred cccCCeEEEhHHHHHHH-------HHHHHHHHHHhCCCcCcEEEEECCCCCcccHHHHHHHHHHcCCceEEEeehHHHHH
Confidence 34556788888999999 99999999999999999999999999999999999999999999999999999999
Q ss_pred HHhccccccCccccccCCCCCcEEEEEEeCCceEEEEEEEEeCCEEEEEEecCCCCccHHHHHHHHHHHHHHHHHhhhcc
Q psy6736 157 IAYGLDKKVGSTAVEYNGSGERNVLIFDLGGGTFDVSILTIEDGIFEVKSTAGDTHLGGEDFDNRMVNHFVQEFKRKYKK 236 (1023)
Q Consensus 157 l~y~~~~~~~~~~~~~~~~~~~~vlV~D~GggT~dvsv~~~~~~~~~v~~~~~~~~lGG~~~D~~l~~~l~~~~~~~~~~ 236 (1023)
++|+.. ..+|+|+||||||+++++.+. + .. ..+..+||++||+.|++++.-.
T Consensus 103 ~~~~~~----------------~~~vvDiGggtt~i~i~~~G~--i--~~-~~~~~~GG~~it~~Ia~~~~i~------- 154 (239)
T TIGR02529 103 AVLQIK----------------NGAVVDVGGGTTGISILKKGK--V--IY-SADEPTGGTHMSLVLAGAYGIS------- 154 (239)
T ss_pred HHhcCC----------------CcEEEEeCCCcEEEEEEECCe--E--EE-EEeeecchHHHHHHHHHHhCCC-------
Confidence 988532 149999999999999986532 2 22 4467899999999987654311
Q ss_pred CccccHHHHHHHHHHHHHHhHHcCCCCceEEEEecccCCceeEEEecHHHHHHHhHHHHHHHHHHHHHHHHHcCCCccCc
Q psy6736 237 DLTTNKRALRRLRTACERAKRTLSSSTQASIEIDSLFEGVDFYTSITRARFEELNADLFRGTMEPVEKSLRDAKMDKAQI 316 (1023)
Q Consensus 237 ~~~~~~~~~~~L~~~ae~~K~~Ls~~~~~~i~i~~~~~~~~~~~~itr~~~e~~~~~~~~~i~~~i~~~l~~~~~~~~~i 316 (1023)
+.+||++|+.++. .+++.+++.++++++.+.+++.|++.+ +
T Consensus 155 ------------~~~AE~~K~~~~~----------------------~~~~~~~i~~~~~~i~~~i~~~l~~~~-----~ 195 (239)
T TIGR02529 155 ------------FEEAEEYKRGHKD----------------------EEEIFPVVKPVYQKMASIVKRHIEGQG-----V 195 (239)
T ss_pred ------------HHHHHHHHHhcCC----------------------HHHHHHHHHHHHHHHHHHHHHHHHhCC-----C
Confidence 1478999987641 456778999999999999999998643 5
Q ss_pred CeEEEEcCCCCcHHHHHHHHHHcCCccccccCCCchhHHhHHHH
Q psy6736 317 HDIVLVGGSTRIPKVQKLLQDFFNGKELNKSINPDEAVAYGAAV 360 (1023)
Q Consensus 317 ~~V~LvGG~sr~p~v~~~l~~~f~~~~i~~~~~pd~aVa~GAa~ 360 (1023)
+.|+|+||+|++|.+++.|++.| +.++..+.||++++|.|||+
T Consensus 196 ~~v~LtGG~a~ipgl~e~l~~~l-g~~v~~~~~P~~~va~Gaa~ 238 (239)
T TIGR02529 196 KDLYLVGGACSFSGFADVFEKQL-GLNVIKPQHPLYVTPLGIAM 238 (239)
T ss_pred CEEEEECchhcchhHHHHHHHHh-CCCcccCCCCCeehhheeec
Confidence 78999999999999999999999 78888899999999999986
No 46
>PF06723 MreB_Mbl: MreB/Mbl protein; InterPro: IPR004753 Bacterial cell shape varies greatly between species, and characteristic morphologies are used for identification purposes. In addition to individual cell shape, the way in which groups of cells are arranged is also typical of some bacterial species, especially Gram-positive coccoids. For many years, it was believed that micro-organisms with other than spheroidal cell shapes maintained morphology by means of their external cell walls. Recently, however, studies of the Gram-positive rod Bacillus subtilis have revealed two related genes that are essential for the integrity of cell morphogenesis []. Termed mreB and mbl, the gene products localise close to the cell surface, forming filamentous helical structures. Many homologues have been found in diverse bacterial groups, suggesting a common ancestor []. The crystal structure of MreB from Thermotoga maritima has been resolved using X-ray crystallography []. It consists of 19 beta-strands and 15 alpha- helices, and shows remarkable structural similarity to eukaryotic actin. MreB crystals also contain proto-filaments, with individual proteins assembling into polymers like F-actin, in the same orientation. It is hypothesised therefore, that MreB was the forerunner of actin in early eukaryotes [].; GO: 0000902 cell morphogenesis; PDB: 1JCF_A 1JCE_A 2WUS_A 1JCG_A.
Probab=99.94 E-value=1.5e-26 Score=252.16 Aligned_cols=284 Identities=20% Similarity=0.288 Sum_probs=208.1
Q ss_pred cceeeEEEeccCeEE-eecCCCceeeeeecccCCcCccccccccccCHHHHHhHhhhhccCcchHHHHHHHHHhCCcCCc
Q psy6736 39 KPAFSGIRLEEGAVM-LYCSDGYTAGWINSITGDLTPWDGARLKAVSAQELSRGVKAIFTAPDILKKKTSEDILRKVDGQ 117 (1023)
Q Consensus 39 ~ps~v~~~~~~~~~~-~G~~~~~~~~~~k~~~g~~~~~~~~~~~~~~~~~v~a~~L~~~~~~~~~l~~~a~~~~~~~~~~ 117 (1023)
.||+++++...+.+. +| ..+..+..+......+..+.+.+.+...+++..+| +++.+.+.......-..
T Consensus 26 epSvVA~~~~~~~i~avG---~~A~~m~gktp~~i~~~~Pl~~GvI~D~~~~~~~l-------~~~l~k~~~~~~~~~p~ 95 (326)
T PF06723_consen 26 EPSVVAYDKDTGKILAVG---DEAKAMLGKTPDNIEVVRPLKDGVIADYEAAEEML-------RYFLKKALGRRSFFRPR 95 (326)
T ss_dssp EES-EEEETTT--EEEES---HHHHTTTTS-GTTEEEE-SEETTEESSHHHHHHHH-------HHHHHHHHTSS-SS--E
T ss_pred cCcEEEEECCCCeEEEEh---HHHHHHhhcCCCccEEEccccCCcccCHHHHHHHH-------HHHHHHhccCCCCCCCe
Confidence 577777774444443 33 23334444555555566677778888889999898 99999887643334468
Q ss_pred ceEecCCCCCHHHHHHHHHHHHHcCCceeeeecchHHHHHHhccccccCccccccCCCCCcEEEEEEeCCceEEEEEEEE
Q psy6736 118 NEGLIPAYFNISSVKSTKDSGTIAGLNVLRIINEPTAAAIAYGLDKKVGSTAVEYNGSGERNVLIFDLGGGTFDVSILTI 197 (1023)
Q Consensus 118 ~vitVPa~~~~~qr~~l~~Aa~~AGl~~~~li~Ep~AAal~y~~~~~~~~~~~~~~~~~~~~vlV~D~GggT~dvsv~~~ 197 (1023)
++|+||+.-++.+|+++.+|+..||.+.+.|++||.|||+..+..-. ++...||+|+||||||++++..
T Consensus 96 vvi~vP~~~T~verrA~~~a~~~aGa~~V~li~ep~AaAiGaGl~i~-----------~~~g~miVDIG~GtTdiavisl 164 (326)
T PF06723_consen 96 VVICVPSGITEVERRALIDAARQAGARKVYLIEEPIAAAIGAGLDIF-----------EPRGSMIVDIGGGTTDIAVISL 164 (326)
T ss_dssp EEEEE-SS--HHHHHHHHHHHHHTT-SEEEEEEHHHHHHHHTT--TT-----------SSS-EEEEEE-SS-EEEEEEET
T ss_pred EEEEeCCCCCHHHHHHHHHHHHHcCCCEEEEecchHHHHhcCCCCCC-----------CCCceEEEEECCCeEEEEEEEC
Confidence 99999999999999999999999999999999999999999988765 6788999999999999999976
Q ss_pred eCCEEEEEEecCCCCccHHHHHHHHHHHHHHHHHhhhccCccccHHHHHHHHHHHHHHhHHcCCCC----ceEEEE--ec
Q psy6736 198 EDGIFEVKSTAGDTHLGGEDFDNRMVNHFVQEFKRKYKKDLTTNKRALRRLRTACERAKRTLSSST----QASIEI--DS 271 (1023)
Q Consensus 198 ~~~~~~v~~~~~~~~lGG~~~D~~l~~~l~~~~~~~~~~~~~~~~~~~~~L~~~ae~~K~~Ls~~~----~~~i~i--~~ 271 (1023)
++ .+. +....+||++||++|.+|+.++|.-. -=...||++|+.++... ...+.+ .+
T Consensus 165 gg-iv~----s~si~~gG~~~DeaI~~~ir~~y~l~-------------Ig~~tAE~iK~~~g~~~~~~~~~~~~v~Grd 226 (326)
T PF06723_consen 165 GG-IVA----SRSIRIGGDDIDEAIIRYIREKYNLL-------------IGERTAEKIKIEIGSASPPEEEESMEVRGRD 226 (326)
T ss_dssp TE-EEE----EEEES-SHHHHHHHHHHHHHHHHSEE---------------HHHHHHHHHHH-BSS--HHHHEEEEEEEE
T ss_pred CC-EEE----EEEEEecCcchhHHHHHHHHHhhCcc-------------cCHHHHHHHHHhcceeeccCCCceEEEECcc
Confidence 32 222 22257899999999999999998511 11237899999987642 223344 35
Q ss_pred ccCCceeEEEecHHHHHHHhHHHHHHHHHHHHHHHHHcCCCc-cCc--CeEEEEcCCCCcHHHHHHHHHHcCCccccccC
Q psy6736 272 LFEGVDFYTSITRARFEELNADLFRGTMEPVEKSLRDAKMDK-AQI--HDIVLVGGSTRIPKVQKLLQDFFNGKELNKSI 348 (1023)
Q Consensus 272 ~~~~~~~~~~itr~~~e~~~~~~~~~i~~~i~~~l~~~~~~~-~~i--~~V~LvGG~sr~p~v~~~l~~~f~~~~i~~~~ 348 (1023)
+..|..-.+.|+.+++.+++.+.+.+|.+.|+++|+...-.. .|| ++|+|+||+|+++.+.++|++.+ +.++...-
T Consensus 227 ~~tGlP~~~~i~~~ev~~ai~~~~~~I~~~i~~~Le~~pPel~~DI~~~GI~LtGGga~l~Gl~~~i~~~~-~~pV~va~ 305 (326)
T PF06723_consen 227 LITGLPKSIEITSSEVREAIEPPVDQIVEAIKEVLEKTPPELAADILENGIVLTGGGALLRGLDEYISEET-GVPVRVAD 305 (326)
T ss_dssp TTTTCEEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHTS-HHHHHHHHHH-EEEESGGGGSBTHHHHHHHHH-SS-EEE-S
T ss_pred ccCCCcEEEEEcHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHCCEEEEChhhhhccHHHHHHHHH-CCCEEEcC
Confidence 677888999999999999999999999999999999864321 243 46999999999999999999999 79999999
Q ss_pred CCchhHHhHHHHHH
Q psy6736 349 NPDEAVAYGAAVQA 362 (1023)
Q Consensus 349 ~pd~aVa~GAa~~a 362 (1023)
||..|||.||....
T Consensus 306 ~P~~~va~G~~~~l 319 (326)
T PF06723_consen 306 DPLTAVARGAGKLL 319 (326)
T ss_dssp STTTHHHHHHHHTT
T ss_pred CHHHHHHHHHHHHH
Confidence 99999999998754
No 47
>COG1077 MreB Actin-like ATPase involved in cell morphogenesis [Cell division and chromosome partitioning]
Probab=99.94 E-value=2e-25 Score=231.74 Aligned_cols=289 Identities=18% Similarity=0.253 Sum_probs=233.5
Q ss_pred cceeeEEEe--ccCeEEeecCCCceeeeeecccCCcCccccccccccCHHHHHhHhhhhccCcchHHHHHHHHHhC-CcC
Q psy6736 39 KPAFSGIRL--EEGAVMLYCSDGYTAGWINSITGDLTPWDGARLKAVSAQELSRGVKAIFTAPDILKKKTSEDILR-KVD 115 (1023)
Q Consensus 39 ~ps~v~~~~--~~~~~~~G~~~~~~~~~~k~~~g~~~~~~~~~~~~~~~~~v~a~~L~~~~~~~~~l~~~a~~~~~-~~~ 115 (1023)
.||||+++. ..+.++ ..+..+..++.+.+++.....+.+++.+...+++..+| +|+++.+..... ...
T Consensus 31 ePSVVAi~~~~~~~~v~--aVG~eAK~MlGrTP~ni~aiRPmkdGVIAd~~~te~ml-------~~fik~~~~~~~~~~~ 101 (342)
T COG1077 31 EPSVVAIESEGKTKVVL--AVGEEAKQMLGRTPGNIVAIRPMKDGVIADFEVTELML-------KYFIKKVHKNGSSFPK 101 (342)
T ss_pred CceEEEEeecCCCceEE--EehHHHHHHhccCCCCceEEeecCCcEeecHHHHHHHH-------HHHHHHhccCCCCCCC
Confidence 566776664 233333 34556667778888888888889999999999999999 999988864333 455
Q ss_pred CcceEecCCCCCHHHHHHHHHHHHHcCCceeeeecchHHHHHHhccccccCccccccCCCCCcEEEEEEeCCceEEEEEE
Q psy6736 116 GQNEGLIPAYFNISSVKSTKDSGTIAGLNVLRIINEPTAAAIAYGLDKKVGSTAVEYNGSGERNVLIFDLGGGTFDVSIL 195 (1023)
Q Consensus 116 ~~~vitVPa~~~~~qr~~l~~Aa~~AGl~~~~li~Ep~AAal~y~~~~~~~~~~~~~~~~~~~~vlV~D~GggT~dvsv~ 195 (1023)
..++++||..-++.+|+|+++|++.||.+.+.++.||.|||+..+..-. ++..-||||+||||||++++
T Consensus 102 prI~i~vP~g~T~VErrAi~ea~~~aGa~~V~lieEp~aAAIGaglpi~-----------ep~G~mvvDIGgGTTevaVI 170 (342)
T COG1077 102 PRIVICVPSGITDVERRAIKEAAESAGAREVYLIEEPMAAAIGAGLPIM-----------EPTGSMVVDIGGGTTEVAVI 170 (342)
T ss_pred CcEEEEecCCccHHHHHHHHHHHHhccCceEEEeccHHHHHhcCCCccc-----------CCCCCEEEEeCCCceeEEEE
Confidence 6799999999999999999999999999999999999999998877654 56677999999999999999
Q ss_pred EEeCCEEEEEEecCCCCccHHHHHHHHHHHHHHHHHhhhccCccccHHHHHHHHHHHHHHhHHcCCCC--------ceEE
Q psy6736 196 TIEDGIFEVKSTAGDTHLGGEDFDNRMVNHFVQEFKRKYKKDLTTNKRALRRLRTACERAKRTLSSST--------QASI 267 (1023)
Q Consensus 196 ~~~~~~~~v~~~~~~~~lGG~~~D~~l~~~l~~~~~~~~~~~~~~~~~~~~~L~~~ae~~K~~Ls~~~--------~~~i 267 (1023)
.+.+-.. +....+||+.||+++.+|+.++|+--.+ -+.||++|+...... +..+
T Consensus 171 Slggiv~-----~~Sirv~GD~~De~Ii~yvr~~~nl~IG-------------e~taE~iK~eiG~a~~~~~~~~~~~eV 232 (342)
T COG1077 171 SLGGIVS-----SSSVRVGGDKMDEAIIVYVRKKYNLLIG-------------ERTAEKIKIEIGSAYPEEEDEELEMEV 232 (342)
T ss_pred EecCEEE-----EeeEEEecchhhHHHHHHHHHHhCeeec-------------HHHHHHHHHHhcccccccCCccceeeE
Confidence 9955322 2236799999999999999999872211 235888998875432 2334
Q ss_pred EEecccCCceeEEEecHHHHHHHhHHHHHHHHHHHHHHHHHcCCC--ccCcCe-EEEEcCCCCcHHHHHHHHHHcCCccc
Q psy6736 268 EIDSLFEGVDFYTSITRARFEELNADLFRGTMEPVEKSLRDAKMD--KAQIHD-IVLVGGSTRIPKVQKLLQDFFNGKEL 344 (1023)
Q Consensus 268 ~i~~~~~~~~~~~~itr~~~e~~~~~~~~~i~~~i~~~l~~~~~~--~~~i~~-V~LvGG~sr~p~v~~~l~~~f~~~~i 344 (1023)
.-.++..|..-.++++.+++.+.+++.++.|++.++..|+...-. .+-++. ++|+||+|.+..+.+.|++.. +.++
T Consensus 233 ~Grdl~~GlPk~i~i~s~ev~eal~~~v~~Iveair~~Le~tpPeL~~DI~ergivltGGGalLrglD~~i~~et-~~pv 311 (342)
T COG1077 233 RGRDLVTGLPKTITINSEEIAEALEEPLNGIVEAIRLVLEKTPPELAADIVERGIVLTGGGALLRGLDRLLSEET-GVPV 311 (342)
T ss_pred EeeecccCCCeeEEEcHHHHHHHHHHHHHHHHHHHHHHHhhCCchhcccHhhCceEEecchHHhcCchHhHHhcc-CCeE
Confidence 445667788889999999999999999999999999999986533 222344 999999999999999999998 7888
Q ss_pred cccCCCchhHHhHHHHHHHHHh
Q psy6736 345 NKSINPDEAVAYGAAVQAAILH 366 (1023)
Q Consensus 345 ~~~~~pd~aVa~GAa~~a~~l~ 366 (1023)
....+|-.|||.|+......+.
T Consensus 312 ~ia~~pL~~Va~G~G~~le~~~ 333 (342)
T COG1077 312 IIADDPLTCVAKGTGKALEALD 333 (342)
T ss_pred EECCChHHHHHhccchhhhhhH
Confidence 8888999999999998877654
No 48
>PRK11678 putative chaperone; Provisional
Probab=99.94 E-value=6.7e-26 Score=260.42 Aligned_cols=185 Identities=25% Similarity=0.340 Sum_probs=153.1
Q ss_pred CCCcceEEEEEeCCceEEEEEEEEeCC-------EEEEEEecCCCCCcHHHHHHHHH-HHHHHHHHhh----hccCc---
Q psy6736 631 GSGERNVLIFDLGGGTFDVSILTIEDG-------IFEVKSTAGDTHLGGEDFDNRMV-NHFVQEFKRK----YKKDL--- 695 (1023)
Q Consensus 631 ~~~~~~vlV~D~GggT~dvsi~~~~~~-------~~~v~~~~gd~~lGG~~~D~~l~-~~~~~~~~~~----~~~~~--- 695 (1023)
.++++++|||||||||||+||+++.++ ..+|++++| .++||+|||.+|+ +++...|... .+.++
T Consensus 205 ~~~~~~vlV~D~GGGT~D~Svv~~~~~~~~~~~r~~~vla~~G-~~lGG~DfD~~L~~~~~~~~fg~~~~~~~g~~~p~~ 283 (450)
T PRK11678 205 LTEEKRVLVVDIGGGTTDCSMLLMGPSWRGRADRSASLLGHSG-QRIGGNDLDIALAFKQLMPLLGMGSETEKGIALPSL 283 (450)
T ss_pred cCCCCeEEEEEeCCCeEEEEEEEecCcccccCCcceeEEecCC-CCCChHHHHHHHHHHHHHHHhhhchhhccCCcCcch
Confidence 356788999999999999999998654 468999999 6899999999998 6777777421 11100
Q ss_pred --------------------------------chhHHHH------------HHHHHHHHHHhhhcCCCceeEEEEecccC
Q psy6736 696 --------------------------------TTNKRAL------------RRLRTACERAKRTLSSSTQASIEIDSLFE 731 (1023)
Q Consensus 696 --------------------------------~~~~~~~------------~~L~~~~e~~K~~Ls~~~~~~~~i~~~~~ 731 (1023)
..+++.+ .+|+.+||++|+.||.+.++.+.++.+.
T Consensus 284 ~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~p~~~~rl~~l~~~~~~~~L~~~aE~aK~~LS~~~~a~i~~~~~~- 362 (450)
T PRK11678 284 PFWNAVAINDVPAQSDFYSLANGRLLNDLIRDAREPEKVARLLKVWRQRLSYRLVRSAEEAKIALSDQAETRASLDFIS- 362 (450)
T ss_pred hhhhhhhhhccchhhhhhhhhhHHHHHHHhhccccHHHHHHHHHHhhhhhhHHHHHHHHHHHHHcCCCCceEEEecccC-
Confidence 0122222 3688999999999999999999887654
Q ss_pred CcceEEEecHHHHHHHHHHHHHHHHHHHHHHHHHcCCCccccceEEEecCccCcHHHHHHHHHhhcCcccCCCCCCccce
Q psy6736 732 GVDFYTSITRARFEELNADLFRGTMEPVEKSLRDAKMDKAQIHDIVLVGGSTRIPKVQKLLQDFFNGKELNKSINPDEAV 811 (1023)
Q Consensus 732 ~~~~~~~itr~~~~~~~~~~~~~~~~~i~~~l~~~~~~~~~i~~V~LvGG~srip~v~~~l~~~f~~~~~~~~~~p~~aV 811 (1023)
.++..+|||++|+++++++++++..+++++|+++++. ++.|+||||+|+||.|++.|++.||..++ ...+|.++|
T Consensus 363 -~~~~~~ItR~efe~ii~~~l~ri~~~i~~~L~~a~~~---~d~VvLvGGsSriP~V~~~l~~~fg~~~v-~~g~~~~sV 437 (450)
T PRK11678 363 -DGLATEISQQGLEEAISQPLARILELVQLALDQAQVK---PDVIYLTGGSARSPLIRAALAQQLPGIPI-VGGDDFGSV 437 (450)
T ss_pred -CCcceeeCHHHHHHHHHHHHHHHHHHHHHHHHHcCCC---CCEEEEcCcccchHHHHHHHHHHCCCCcE-EeCCCcchH
Confidence 4577899999999999999999999999999999976 47899999999999999999999976555 467999999
Q ss_pred ecchHHHHHHH
Q psy6736 812 AYGAAVQAAIL 822 (1023)
Q Consensus 812 a~GAa~~a~~l 822 (1023)
|.|+|++|..+
T Consensus 438 a~Gla~~a~~~ 448 (450)
T PRK11678 438 TAGLARWAQVV 448 (450)
T ss_pred HHHHHHHHHhh
Confidence 99999999653
No 49
>PRK15080 ethanolamine utilization protein EutJ; Provisional
Probab=99.93 E-value=7.3e-25 Score=236.74 Aligned_cols=242 Identities=24% Similarity=0.279 Sum_probs=192.0
Q ss_pred cceeeEEEeccCeEEee--cCCCceeeeeecccCC-cCccccccccccCHHHHHhHhhhhccCcchHHHHHHHHHhCCcC
Q psy6736 39 KPAFSGIRLEEGAVMLY--CSDGYTAGWINSITGD-LTPWDGARLKAVSAQELSRGVKAIFTAPDILKKKTSEDILRKVD 115 (1023)
Q Consensus 39 ~ps~v~~~~~~~~~~~G--~~~~~~~~~~k~~~g~-~~~~~~~~~~~~~~~~v~a~~L~~~~~~~~~l~~~a~~~~~~~~ 115 (1023)
.+-++++|..+.++.+= ..... ..+- ..+....+.+.+...+....+| +++++.|+.++|.++
T Consensus 23 ~~~~~~iDiGSssi~~vv~~~~~~-------~~~~~~~~~~~vr~G~i~di~~a~~~i-------~~~~~~ae~~~g~~i 88 (267)
T PRK15080 23 SPLKVGVDLGTANIVLAVLDEDGQ-------PVAGALEWADVVRDGIVVDFIGAVTIV-------RRLKATLEEKLGREL 88 (267)
T ss_pred CCEEEEEEccCceEEEEEEcCCCC-------EEEEEeccccccCCCEEeeHHHHHHHH-------HHHHHHHHHHhCCCc
Confidence 45577777666665531 11000 1111 1133344445566677777787 999999999999999
Q ss_pred CcceEecCCCCCHHHHHHHHHHHHHcCCceeeeecchHHHHHHhccccccCccccccCCCCCcEEEEEEeCCceEEEEEE
Q psy6736 116 GQNEGLIPAYFNISSVKSTKDSGTIAGLNVLRIINEPTAAAIAYGLDKKVGSTAVEYNGSGERNVLIFDLGGGTFDVSIL 195 (1023)
Q Consensus 116 ~~~vitVPa~~~~~qr~~l~~Aa~~AGl~~~~li~Ep~AAal~y~~~~~~~~~~~~~~~~~~~~vlV~D~GggT~dvsv~ 195 (1023)
..++++||++|+..+|+++.+|++.||+++..+++||.|++.+|... ..+|+|+||||||++++
T Consensus 89 ~~v~~~vp~~~~~~~~~~~~~~~~~aGl~~~~ii~e~~A~a~~~~~~----------------~~~vvDIGggtt~i~v~ 152 (267)
T PRK15080 89 THAATAIPPGTSEGDPRAIINVVESAGLEVTHVLDEPTAAAAVLGID----------------NGAVVDIGGGTTGISIL 152 (267)
T ss_pred CeEEEEeCCCCCchhHHHHHHHHHHcCCceEEEechHHHHHHHhCCC----------------CcEEEEeCCCcEEEEEE
Confidence 99999999999999999999999999999999999999999887431 15899999999999997
Q ss_pred EEeCCEEEEEEecCCCCccHHHHHHHHHHHHHHHHHhhhccCccccHHHHHHHHHHHHHHhHHcCCCCceEEEEecccCC
Q psy6736 196 TIEDGIFEVKSTAGDTHLGGEDFDNRMVNHFVQEFKRKYKKDLTTNKRALRRLRTACERAKRTLSSSTQASIEIDSLFEG 275 (1023)
Q Consensus 196 ~~~~~~~~v~~~~~~~~lGG~~~D~~l~~~l~~~~~~~~~~~~~~~~~~~~~L~~~ae~~K~~Ls~~~~~~i~i~~~~~~ 275 (1023)
+- +.+. . .++..+||++||+.|++++.-. +.+||++|+.++
T Consensus 153 ~~--g~~~--~-~~~~~~GG~~it~~Ia~~l~i~-------------------~~eAE~lK~~~~--------------- 193 (267)
T PRK15080 153 KD--GKVV--Y-SADEPTGGTHMSLVLAGAYGIS-------------------FEEAEQYKRDPK--------------- 193 (267)
T ss_pred EC--CeEE--E-EecccCchHHHHHHHHHHhCCC-------------------HHHHHHHHhccC---------------
Confidence 54 3321 1 3567999999999998775321 247899998753
Q ss_pred ceeEEEecHHHHHHHhHHHHHHHHHHHHHHHHHcCCCccCcCeEEEEcCCCCcHHHHHHHHHHcCCccccccCCCchhHH
Q psy6736 276 VDFYTSITRARFEELNADLFRGTMEPVEKSLRDAKMDKAQIHDIVLVGGSTRIPKVQKLLQDFFNGKELNKSINPDEAVA 355 (1023)
Q Consensus 276 ~~~~~~itr~~~e~~~~~~~~~i~~~i~~~l~~~~~~~~~i~~V~LvGG~sr~p~v~~~l~~~f~~~~i~~~~~pd~aVa 355 (1023)
+++++.++++++++++.+.+++.++.. +++.|+|+||+|++|.+++.+++.| +.++....||+.++|
T Consensus 194 -------~~~~~~~ii~~~~~~i~~~i~~~l~~~-----~~~~IvLtGG~s~lpgl~e~l~~~l-g~~v~~~~~P~~~~a 260 (267)
T PRK15080 194 -------HHKEIFPVVKPVVEKMASIVARHIEGQ-----DVEDIYLVGGTCCLPGFEEVFEKQT-GLPVHKPQHPLFVTP 260 (267)
T ss_pred -------CHHHHHHHHHHHHHHHHHHHHHHHhcC-----CCCEEEEECCcccchhHHHHHHHHh-CCCcccCCCchHHHH
Confidence 357889999999999999999999864 5789999999999999999999999 788888999999999
Q ss_pred hHHHHHH
Q psy6736 356 YGAAVQA 362 (1023)
Q Consensus 356 ~GAa~~a 362 (1023)
.|||+|+
T Consensus 261 ~Gaa~~~ 267 (267)
T PRK15080 261 LGIALSC 267 (267)
T ss_pred HHHHhhC
Confidence 9999874
No 50
>TIGR01174 ftsA cell division protein FtsA. This bacterial cell division protein interacts with FtsZ, the bacterial homolog of tubulin. It is an ATP-binding protein and shows structural similarities to actin and heat shock cognate protein 70.
Probab=99.84 E-value=3.9e-20 Score=211.36 Aligned_cols=191 Identities=24% Similarity=0.332 Sum_probs=150.8
Q ss_pred HHHHHHHHHcCCceeeeecchHHHHHHhccccccCccccccCCCCCcEEEEEEeCCceEEEEEEEEeCCEEEEEEecCCC
Q psy6736 132 KSTKDSGTIAGLNVLRIINEPTAAAIAYGLDKKVGSTAVEYNGSGERNVLIFDLGGGTFDVSILTIEDGIFEVKSTAGDT 211 (1023)
Q Consensus 132 ~~l~~Aa~~AGl~~~~li~Ep~AAal~y~~~~~~~~~~~~~~~~~~~~vlV~D~GggT~dvsv~~~~~~~~~v~~~~~~~ 211 (1023)
+.+.+|++.||+++..++.||.|+|++|..... .+..++|+|+||||||++++.. +.... ....
T Consensus 161 ~~~~~~~~~aGl~~~~i~~~~~A~a~a~~~~~~-----------~~~~~~vvDiG~gtt~i~i~~~--g~~~~---~~~i 224 (371)
T TIGR01174 161 RNLVKCVERCGLEVDNIVLSGLASAIAVLTEDE-----------KELGVCLIDIGGGTTDIAVYTG--GSIRY---TKVI 224 (371)
T ss_pred HHHHHHHHHcCCCeeeEEEhhhhhhhhhcCcch-----------hcCCEEEEEeCCCcEEEEEEEC--CEEEE---Eeee
Confidence 678889999999999999999999998854322 4567999999999999999864 32221 2346
Q ss_pred CccHHHHHHHHHHHHHHHHHhhhccCccccHHHHHHHHHHHHHHhHHcCCC------CceEEEEecccCCceeEEEecHH
Q psy6736 212 HLGGEDFDNRMVNHFVQEFKRKYKKDLTTNKRALRRLRTACERAKRTLSSS------TQASIEIDSLFEGVDFYTSITRA 285 (1023)
Q Consensus 212 ~lGG~~~D~~l~~~l~~~~~~~~~~~~~~~~~~~~~L~~~ae~~K~~Ls~~------~~~~i~i~~~~~~~~~~~~itr~ 285 (1023)
.+||++||+.|.+.+.- .+.+||++|+.++.. .+..+.++... .+....++|+
T Consensus 225 ~~GG~~it~~i~~~l~~-------------------~~~~AE~lK~~~~~~~~~~~~~~~~i~~~~~~--~~~~~~is~~ 283 (371)
T TIGR01174 225 PIGGNHITKDIAKALRT-------------------PLEEAERIKIKYGCASIPLEGPDENIEIPSVG--ERPPRSLSRK 283 (371)
T ss_pred cchHHHHHHHHHHHhCC-------------------CHHHHHHHHHHeeEecccCCCCCCEEEeccCC--CCCCeEEcHH
Confidence 79999999998765421 234899999999863 24456665443 3566899999
Q ss_pred HHHHHhHHHHHHHHHHHH-HHHHHcCCCccCcCe-EEEEcCCCCcHHHHHHHHHHcCCcccccc------------CCCc
Q psy6736 286 RFEELNADLFRGTMEPVE-KSLRDAKMDKAQIHD-IVLVGGSTRIPKVQKLLQDFFNGKELNKS------------INPD 351 (1023)
Q Consensus 286 ~~e~~~~~~~~~i~~~i~-~~l~~~~~~~~~i~~-V~LvGG~sr~p~v~~~l~~~f~~~~i~~~------------~~pd 351 (1023)
+|++++.+.++++.+.+. +.|++++.. .+++. |+|+||+|++|.+++.+++.| +.++... -+|.
T Consensus 284 ~l~~ii~~~~~ei~~~i~~~~L~~~~~~-~~i~~gIvLtGG~S~ipgi~~~l~~~~-~~~vr~~~P~~~~~~~~~~~~p~ 361 (371)
T TIGR01174 284 ELAEIIEARAEEILEIVKQKELRKSGFK-EELNGGIVLTGGGAQLEGIVELAEKVF-DNPVRIGLPQNIGGLTEDVNDPE 361 (371)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhcCCc-ccCCCEEEEeChHHcccCHHHHHHHHh-CCCeEEECCCccCCchhhcCCcH
Confidence 999999999999999997 999998876 67777 999999999999999999999 4433211 2677
Q ss_pred hhHHhHHHHH
Q psy6736 352 EAVAYGAAVQ 361 (1023)
Q Consensus 352 ~aVa~GAa~~ 361 (1023)
.++|.|.++|
T Consensus 362 ~~~a~Gl~~~ 371 (371)
T TIGR01174 362 YSTAVGLLLY 371 (371)
T ss_pred HHHHHHHHhC
Confidence 8888888764
No 51
>PRK13928 rod shape-determining protein Mbl; Provisional
Probab=99.83 E-value=5.8e-20 Score=207.02 Aligned_cols=172 Identities=20% Similarity=0.362 Sum_probs=138.3
Q ss_pred CCcceEEEEEeCCceEEEEEEEEeCCEEEEEEecCCCCCcHHHHHHHHHHHHHHHHHhhhccCcchhHHHHHHHHHHHHH
Q psy6736 632 SGERNVLIFDLGGGTFDVSILTIEDGIFEVKSTAGDTHLGGEDFDNRMVNHFVQEFKRKYKKDLTTNKRALRRLRTACER 711 (1023)
Q Consensus 632 ~~~~~vlV~D~GggT~dvsi~~~~~~~~~v~~~~gd~~lGG~~~D~~l~~~~~~~~~~~~~~~~~~~~~~~~~L~~~~e~ 711 (1023)
+++..++|||+||||||+|+++... .+ ..++..+||++||+.|++++.+++....+ ...||+
T Consensus 144 ~~~~~~lVvDiGggttdvsvv~~g~-~~----~~~~~~lGG~did~~i~~~l~~~~~~~~~-------------~~~ae~ 205 (336)
T PRK13928 144 SQPSGNMVVDIGGGTTDIAVLSLGG-IV----TSSSIKVAGDKFDEAIIRYIRKKYKLLIG-------------ERTAEE 205 (336)
T ss_pred cCCCeEEEEEeCCCeEEEEEEEeCC-EE----EeCCcCCHHHHHHHHHHHHHHHHhchhcC-------------HHHHHH
Confidence 4456799999999999999998642 21 34578999999999999999877642211 246899
Q ss_pred HhhhcCCCc----eeEEEEe--cccCCcceEEEecHHHHHHHHHHHHHHHHHHHHHHHHHcC--CCccccc-eEEEecCc
Q psy6736 712 AKRTLSSST----QASIEID--SLFEGVDFYTSITRARFEELNADLFRGTMEPVEKSLRDAK--MDKAQIH-DIVLVGGS 782 (1023)
Q Consensus 712 ~K~~Ls~~~----~~~~~i~--~~~~~~~~~~~itr~~~~~~~~~~~~~~~~~i~~~l~~~~--~~~~~i~-~V~LvGG~ 782 (1023)
+|+.++... ...+.+. ++..+.+..++|+|++|++++.++++++.+.+.+.|+.++ +..+.++ .|+|+||+
T Consensus 206 lK~~~~~~~~~~~~~~~~v~g~~~~~~~~~~~~i~~~~~~eii~~~~~~i~~~i~~~l~~~~~~~~~~~i~~~IvL~GG~ 285 (336)
T PRK13928 206 IKIKIGTAFPGAREEEMEIRGRDLVTGLPKTITVTSEEIREALKEPVSAIVQAVKSVLERTPPELSADIIDRGIIMTGGG 285 (336)
T ss_pred HHHHhcccccccCCcEEEEecccccCCCceEEEECHHHHHHHHHHHHHHHHHHHHHHHHhCCccccHhhcCCCEEEECcc
Confidence 999886431 1233332 2344566778999999999999999999999999999986 4556777 79999999
Q ss_pred cCcHHHHHHHHHhhcCcccCCCCCCccceecchHHHHHHH
Q psy6736 783 TRIPKVQKLLQDFFNGKELNKSINPDEAVAYGAAVQAAIL 822 (1023)
Q Consensus 783 srip~v~~~l~~~f~~~~~~~~~~p~~aVa~GAa~~a~~l 822 (1023)
|++|.|+++|++.| +.++....||++|||+|||+++..+
T Consensus 286 s~ipgi~e~l~~~~-~~~v~~~~~P~~ava~Gaa~~~~~~ 324 (336)
T PRK13928 286 ALLHGLDKLLAEET-KVPVYIAEDPISCVALGTGKMLENI 324 (336)
T ss_pred cchhhHHHHHHHHH-CCCceecCCHHHHHHHHHHHHHhch
Confidence 99999999999999 5677788899999999999998764
No 52
>PRK09472 ftsA cell division protein FtsA; Reviewed
Probab=99.81 E-value=8.7e-19 Score=202.36 Aligned_cols=194 Identities=21% Similarity=0.275 Sum_probs=148.2
Q ss_pred HHHHHHHHHcCCceeeeecchHHHHHHhccccccCccccccCCCCCcEEEEEEeCCceEEEEEEEEeCCEEEEEEecCCC
Q psy6736 132 KSTKDSGTIAGLNVLRIINEPTAAAIAYGLDKKVGSTAVEYNGSGERNVLIFDLGGGTFDVSILTIEDGIFEVKSTAGDT 211 (1023)
Q Consensus 132 ~~l~~Aa~~AGl~~~~li~Ep~AAal~y~~~~~~~~~~~~~~~~~~~~vlV~D~GggT~dvsv~~~~~~~~~v~~~~~~~ 211 (1023)
+.+.+|++.||+++..++.||.|+|+++..... ++..++|+|+||||||++++. ++.+. .....
T Consensus 169 ~~~~~a~~~aGl~v~~iv~ep~Aaa~a~l~~~e-----------~~~gv~vvDiGggtTdisv~~--~G~l~---~~~~i 232 (420)
T PRK09472 169 KNIVKAVERCGLKVDQLIFAGLASSYAVLTEDE-----------RELGVCVVDIGGGTMDIAVYT--GGALR---HTKVI 232 (420)
T ss_pred HHHHHHHHHcCCeEeeEEehhhHHHHHhcChhh-----------hhcCeEEEEeCCCceEEEEEE--CCEEE---EEeee
Confidence 445679999999999999999999999865432 467799999999999999997 34322 23346
Q ss_pred CccHHHHHHHHHHHHHHHHHhhhccCccccHHHHHHHHHHHHHHhHHcCCC------CceEEEEecccCCceeEEEecHH
Q psy6736 212 HLGGEDFDNRMVNHFVQEFKRKYKKDLTTNKRALRRLRTACERAKRTLSSS------TQASIEIDSLFEGVDFYTSITRA 285 (1023)
Q Consensus 212 ~lGG~~~D~~l~~~l~~~~~~~~~~~~~~~~~~~~~L~~~ae~~K~~Ls~~------~~~~i~i~~~~~~~~~~~~itr~ 285 (1023)
.+||++|++.|+..+.-. ...||++|+.+... .+..+.++...+.. ...++|.
T Consensus 233 ~~GG~~it~dIa~~l~i~-------------------~~~AE~lK~~~g~~~~~~~~~~~~i~v~~~~~~~--~~~i~~~ 291 (420)
T PRK09472 233 PYAGNVVTSDIAYAFGTP-------------------PSDAEAIKVRHGCALGSIVGKDESVEVPSVGGRP--PRSLQRQ 291 (420)
T ss_pred echHHHHHHHHHHHhCcC-------------------HHHHHHHHHhcceeccccCCCCceeEecCCCCCC--CeEEcHH
Confidence 799999999998655321 24899999775432 23456665443322 2588999
Q ss_pred HHHHHhHHHHHHHHHHHHH-------HHHHcCCCccCcCeEEEEcCCCCcHHHHHHHHHHcCCccccc------------
Q psy6736 286 RFEELNADLFRGTMEPVEK-------SLRDAKMDKAQIHDIVLVGGSTRIPKVQKLLQDFFNGKELNK------------ 346 (1023)
Q Consensus 286 ~~e~~~~~~~~~i~~~i~~-------~l~~~~~~~~~i~~V~LvGG~sr~p~v~~~l~~~f~~~~i~~------------ 346 (1023)
+|.+++.+.++++++.+.+ .+..+++....++.|+|+||+|++|.|++.+++.| +.++..
T Consensus 292 ~l~~ii~~r~~ei~~~i~~~l~~~~~~l~~~g~~~~~~~givLtGG~a~lpgi~e~~~~~f-~~~vri~~P~~~~g~~~~ 370 (420)
T PRK09472 292 TLAEVIEPRYTELLNLVNEEILQLQEQLRQQGVKHHLAAGIVLTGGAAQIEGLAACAQRVF-HTQVRIGAPLNITGLTDY 370 (420)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCcccCCCEEEEeCchhccccHHHHHHHHh-CCCeEEeCCcccCCChhh
Confidence 9999999977777766654 55667777778899999999999999999999999 444322
Q ss_pred cCCCchhHHhHHHHHHH
Q psy6736 347 SINPDEAVAYGAAVQAA 363 (1023)
Q Consensus 347 ~~~pd~aVa~GAa~~a~ 363 (1023)
..+|..|+|.|.++|+.
T Consensus 371 ~~~P~~ata~Gl~~~~~ 387 (420)
T PRK09472 371 AQEPYYSTAVGLLHYGK 387 (420)
T ss_pred cCCcHHHHHHHHHHHhh
Confidence 13899999999999976
No 53
>PRK13927 rod shape-determining protein MreB; Provisional
Probab=99.78 E-value=1.3e-18 Score=196.52 Aligned_cols=172 Identities=21% Similarity=0.377 Sum_probs=134.9
Q ss_pred CCcceEEEEEeCCceEEEEEEEEeCCEEEEEEecCCCCCcHHHHHHHHHHHHHHHHHhhhccCcchhHHHHHHHHHHHHH
Q psy6736 632 SGERNVLIFDLGGGTFDVSILTIEDGIFEVKSTAGDTHLGGEDFDNRMVNHFVQEFKRKYKKDLTTNKRALRRLRTACER 711 (1023)
Q Consensus 632 ~~~~~vlV~D~GggT~dvsi~~~~~~~~~v~~~~gd~~lGG~~~D~~l~~~~~~~~~~~~~~~~~~~~~~~~~L~~~~e~ 711 (1023)
+++..++|||+||||||+++++..+.. ..++.++||++||+.|++++.+++.. ... ...||+
T Consensus 145 ~~~~~~lvvDiGggttdvs~v~~~~~~-----~~~~~~lGG~~id~~l~~~l~~~~~~----~~~---------~~~ae~ 206 (334)
T PRK13927 145 TEPTGSMVVDIGGGTTEVAVISLGGIV-----YSKSVRVGGDKFDEAIINYVRRNYNL----LIG---------ERTAER 206 (334)
T ss_pred cCCCeEEEEEeCCCeEEEEEEecCCeE-----eeCCcCChHHHHHHHHHHHHHHHhCc----CcC---------HHHHHH
Confidence 345678999999999999999865321 33557899999999999999866531 111 246899
Q ss_pred HhhhcCCCce----eEEEE--ecccCCcceEEEecHHHHHHHHHHHHHHHHHHHHHHHHHcCCC--ccccc-eEEEecCc
Q psy6736 712 AKRTLSSSTQ----ASIEI--DSLFEGVDFYTSITRARFEELNADLFRGTMEPVEKSLRDAKMD--KAQIH-DIVLVGGS 782 (1023)
Q Consensus 712 ~K~~Ls~~~~----~~~~i--~~~~~~~~~~~~itr~~~~~~~~~~~~~~~~~i~~~l~~~~~~--~~~i~-~V~LvGG~ 782 (1023)
+|+.++.... ..+.+ +.+..+.+..++|+|++|++++.+.++++.+.+.++|+++... .+-++ .|+|+||+
T Consensus 207 iK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~e~i~~~~~~i~~~i~~~l~~~~~~~~~~~~~~~IvL~GG~ 286 (334)
T PRK13927 207 IKIEIGSAYPGDEVLEMEVRGRDLVTGLPKTITISSNEIREALQEPLSAIVEAVKVALEQTPPELAADIVDRGIVLTGGG 286 (334)
T ss_pred HHHHhhccCCCCCCceEEEeCcccCCCCCeEEEECHHHHHHHHHHHHHHHHHHHHHHHHHCCchhhhhhhcCCEEEECch
Confidence 9998875322 22333 2334556678899999999999999999999999999988643 23344 59999999
Q ss_pred cCcHHHHHHHHHhhcCcccCCCCCCccceecchHHHHHHH
Q psy6736 783 TRIPKVQKLLQDFFNGKELNKSINPDEAVAYGAAVQAAIL 822 (1023)
Q Consensus 783 srip~v~~~l~~~f~~~~~~~~~~p~~aVa~GAa~~a~~l 822 (1023)
|++|.++++|++.| +.++....||+++||+|||+++...
T Consensus 287 s~ipgl~~~l~~~~-~~~v~~~~~P~~ava~Ga~~~~~~~ 325 (334)
T PRK13927 287 ALLRGLDKLLSEET-GLPVHVAEDPLTCVARGTGKALENI 325 (334)
T ss_pred hhhhHHHHHHHHHH-CCCcEecCCHHHHHHHHHHHHHhhH
Confidence 99999999999999 5778888899999999999998653
No 54
>PRK13929 rod-share determining protein MreBH; Provisional
Probab=99.75 E-value=1.9e-17 Score=185.87 Aligned_cols=169 Identities=17% Similarity=0.352 Sum_probs=134.2
Q ss_pred CCcceEEEEEeCCceEEEEEEEEeCCEEEEEEecCCCCCcHHHHHHHHHHHHHHHHHhhhccCcchhHHHHHHHHHHHHH
Q psy6736 632 SGERNVLIFDLGGGTFDVSILTIEDGIFEVKSTAGDTHLGGEDFDNRMVNHFVQEFKRKYKKDLTTNKRALRRLRTACER 711 (1023)
Q Consensus 632 ~~~~~vlV~D~GggT~dvsi~~~~~~~~~v~~~~gd~~lGG~~~D~~l~~~~~~~~~~~~~~~~~~~~~~~~~L~~~~e~ 711 (1023)
+++..++|+|+||||+|++++.+.+ .+ ..++..+||++||+.|++++.+.+. .... ...||+
T Consensus 147 ~~~~~~lvvDiG~gtt~v~vi~~~~-~~----~~~~~~~GG~~id~~l~~~l~~~~~----~~~~---------~~~AE~ 208 (335)
T PRK13929 147 DEPVANVVVDIGGGTTEVAIISFGG-VV----SCHSIRIGGDQLDEDIVSFVRKKYN----LLIG---------ERTAEQ 208 (335)
T ss_pred CCCceEEEEEeCCCeEEEEEEEeCC-EE----EecCcCCHHHHHHHHHHHHHHHHhC----cCcC---------HHHHHH
Confidence 3457799999999999999998643 21 3456789999999999999987553 2111 257999
Q ss_pred HhhhcCCCc----eeEEEEe--cccCCcceEEEecHHHHHHHHHHHHHHHHHHHHHHHHHcCC--Cccccc-eEEEecCc
Q psy6736 712 AKRTLSSST----QASIEID--SLFEGVDFYTSITRARFEELNADLFRGTMEPVEKSLRDAKM--DKAQIH-DIVLVGGS 782 (1023)
Q Consensus 712 ~K~~Ls~~~----~~~~~i~--~~~~~~~~~~~itr~~~~~~~~~~~~~~~~~i~~~l~~~~~--~~~~i~-~V~LvGG~ 782 (1023)
+|+.++... ...+.+. ++..+....+++++++|++++.+++.++.+.+.+.|+++.. ..+.++ .|+|+||+
T Consensus 209 iK~~l~~~~~~~~~~~~~v~g~~~~~~~p~~i~i~~~~~~~~i~~~l~~i~~~i~~~L~~~~~~l~~~~~~~gIvLtGG~ 288 (335)
T PRK13929 209 VKMEIGYALIEHEPETMEVRGRDLVTGLPKTITLESKEIQGAMRESLLHILEAIRATLEDCPPELSGDIVDRGVILTGGG 288 (335)
T ss_pred HHHHHcCCCCCCCCceEEEeCCccCCCCCeEEEEcHHHHHHHHHHHHHHHHHHHHHHHHhCCcccchhhcCCCEEEEchh
Confidence 999997631 2223332 23345557889999999999999999999999999999864 346677 69999999
Q ss_pred cCcHHHHHHHHHhhcCcccCCCCCCccceecchHHHH
Q psy6736 783 TRIPKVQKLLQDFFNGKELNKSINPDEAVAYGAAVQA 819 (1023)
Q Consensus 783 srip~v~~~l~~~f~~~~~~~~~~p~~aVa~GAa~~a 819 (1023)
|++|.++++|++.| +.++....||+++||+||+..-
T Consensus 289 s~lpgl~e~l~~~~-~~~v~~~~~P~~~Va~Ga~~~~ 324 (335)
T PRK13929 289 ALLNGIKEWLSEEI-VVPVHVAANPLESVAIGTGRSL 324 (335)
T ss_pred hhhhhHHHHHHHHH-CCCceeCCCHHHHHHHHHHHHH
Confidence 99999999999999 5677778899999999999774
No 55
>TIGR00904 mreB cell shape determining protein, MreB/Mrl family. A close homolog is found in the Archaeon Methanobacterium thermoautotrophicum, and a more distant homolog in Archaeoglobus fulgidus. The family is related to cell division protein FtsA and heat shock protein DnaK.
Probab=99.74 E-value=3.3e-17 Score=184.62 Aligned_cols=171 Identities=23% Similarity=0.372 Sum_probs=132.1
Q ss_pred CCcceEEEEEeCCceEEEEEEEEeCCEEEEEEecCCCCCcHHHHHHHHHHHHHHHHHhhhccCcchhHHHHHHHHHHHHH
Q psy6736 632 SGERNVLIFDLGGGTFDVSILTIEDGIFEVKSTAGDTHLGGEDFDNRMVNHFVQEFKRKYKKDLTTNKRALRRLRTACER 711 (1023)
Q Consensus 632 ~~~~~vlV~D~GggT~dvsi~~~~~~~~~v~~~~gd~~lGG~~~D~~l~~~~~~~~~~~~~~~~~~~~~~~~~L~~~~e~ 711 (1023)
+++..++|||+||||||+++++..+-. ..++.++||++||+.|++++.+++. .... +..||+
T Consensus 147 ~~~~~~lVvDiG~gttdvs~v~~~~~~-----~~~~~~lGG~did~~l~~~l~~~~~----~~~~---------~~~ae~ 208 (333)
T TIGR00904 147 EEPTGSMVVDIGGGTTEVAVISLGGIV-----VSRSIRVGGDEFDEAIINYIRRTYN----LLIG---------EQTAER 208 (333)
T ss_pred cCCceEEEEEcCCCeEEEEEEEeCCEE-----ecCCccchHHHHHHHHHHHHHHHhc----ccCC---------HHHHHH
Confidence 345779999999999999999875321 3356789999999999999986653 1111 257899
Q ss_pred HhhhcCCCce-----eEEEEec--ccCCcceEEEecHHHHHHHHHHHHHHHHHHHHHHHHHcCCCc-ccc-c-eEEEecC
Q psy6736 712 AKRTLSSSTQ-----ASIEIDS--LFEGVDFYTSITRARFEELNADLFRGTMEPVEKSLRDAKMDK-AQI-H-DIVLVGG 781 (1023)
Q Consensus 712 ~K~~Ls~~~~-----~~~~i~~--~~~~~~~~~~itr~~~~~~~~~~~~~~~~~i~~~l~~~~~~~-~~i-~-~V~LvGG 781 (1023)
+|+.++.... ..+.+.. ...+......|++++|.+++.+.++++.+.+.+.|+.+.... .++ + .|+|+||
T Consensus 209 lK~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~e~i~~~~~~i~~~i~~~l~~~~~~~~~~l~~~~IvL~GG 288 (333)
T TIGR00904 209 IKIEIGSAYPLNDEPRKMEVRGRDLVTGLPRTIEITSVEVREALQEPVNQIVEAVKRTLEKTPPELAADIVERGIVLTGG 288 (333)
T ss_pred HHHHHhccccccccccceeecCccccCCCCeEEEECHHHHHHHHHHHHHHHHHHHHHHHHhCCchhhhhhccCCEEEECc
Confidence 9999865321 1222221 122334567899999999999999999999999999876432 244 3 6999999
Q ss_pred ccCcHHHHHHHHHhhcCcccCCCCCCccceecchHHHHHH
Q psy6736 782 STRIPKVQKLLQDFFNGKELNKSINPDEAVAYGAAVQAAI 821 (1023)
Q Consensus 782 ~srip~v~~~l~~~f~~~~~~~~~~p~~aVa~GAa~~a~~ 821 (1023)
+|++|.++++|++.| +.++....||+++||.||++++..
T Consensus 289 ss~ipgl~e~l~~~~-~~~v~~~~~P~~~va~Ga~~~~~~ 327 (333)
T TIGR00904 289 GALLRNLDKLLSKET-GLPVIVADDPLLCVAKGTGKALED 327 (333)
T ss_pred ccchhhHHHHHHHHH-CCCceecCChHHHHHHHHHHHHhC
Confidence 999999999999999 677888899999999999999743
No 56
>PRK13930 rod shape-determining protein MreB; Provisional
Probab=99.71 E-value=1.1e-16 Score=180.88 Aligned_cols=169 Identities=21% Similarity=0.337 Sum_probs=131.3
Q ss_pred cceEEEEEeCCceEEEEEEEEeCCEEEEEEecCCCCCcHHHHHHHHHHHHHHHHHhhhccCcchhHHHHHHHHHHHHHHh
Q psy6736 634 ERNVLIFDLGGGTFDVSILTIEDGIFEVKSTAGDTHLGGEDFDNRMVNHFVQEFKRKYKKDLTTNKRALRRLRTACERAK 713 (1023)
Q Consensus 634 ~~~vlV~D~GggT~dvsi~~~~~~~~~v~~~~gd~~lGG~~~D~~l~~~~~~~~~~~~~~~~~~~~~~~~~L~~~~e~~K 713 (1023)
+..++|||+||||||++++..... . ..+...+||.+||+.|++++.+++. .... ...||++|
T Consensus 151 ~~~~lVvDiG~gttdvs~v~~g~~----~-~~~~~~lGG~~id~~l~~~l~~~~~----~~~~---------~~~ae~~K 212 (335)
T PRK13930 151 PVGNMVVDIGGGTTEVAVISLGGI----V-YSESIRVAGDEMDEAIVQYVRRKYN----LLIG---------ERTAEEIK 212 (335)
T ss_pred CCceEEEEeCCCeEEEEEEEeCCE----E-eecCcCchhHHHHHHHHHHHHHHhC----CCCC---------HHHHHHHH
Confidence 456899999999999999985431 1 2456789999999999999987642 2111 24689999
Q ss_pred hhcCCCce----eEEEEe--cccCCcceEEEecHHHHHHHHHHHHHHHHHHHHHHHHHcCCC--ccccce-EEEecCccC
Q psy6736 714 RTLSSSTQ----ASIEID--SLFEGVDFYTSITRARFEELNADLFRGTMEPVEKSLRDAKMD--KAQIHD-IVLVGGSTR 784 (1023)
Q Consensus 714 ~~Ls~~~~----~~~~i~--~~~~~~~~~~~itr~~~~~~~~~~~~~~~~~i~~~l~~~~~~--~~~i~~-V~LvGG~sr 784 (1023)
+.++.... ..+.+. ....+....+.|++++|++++.+.++++.+.+.++|+.+... .+.++. |+|+||+|+
T Consensus 213 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~e~i~~~~~~i~~~i~~~l~~~~~~~~~~~~~~~IvL~GG~s~ 292 (335)
T PRK13930 213 IEIGSAYPLDEEESMEVRGRDLVTGLPKTIEISSEEVREALAEPLQQIVEAVKSVLEKTPPELAADIIDRGIVLTGGGAL 292 (335)
T ss_pred HHhhcCcCCCCCceEEEECccCCCCCCeeEEECHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHhhHHHhCCEEEECchhc
Confidence 99875432 123332 223444567899999999999999999999999999987533 233464 999999999
Q ss_pred cHHHHHHHHHhhcCcccCCCCCCccceecchHHHHHH
Q psy6736 785 IPKVQKLLQDFFNGKELNKSINPDEAVAYGAAVQAAI 821 (1023)
Q Consensus 785 ip~v~~~l~~~f~~~~~~~~~~p~~aVa~GAa~~a~~ 821 (1023)
+|.++++|++.| +.++....+|+++||+||++++..
T Consensus 293 ipg~~~~l~~~~-~~~v~~~~~p~~ava~Ga~~~~~~ 328 (335)
T PRK13930 293 LRGLDKLLSEET-GLPVHIAEDPLTCVARGTGKALEN 328 (335)
T ss_pred chhHHHHHHHHH-CCCceecCCHHHHHHHHHHHHHhC
Confidence 999999999999 567777889999999999999854
No 57
>COG0849 ftsA Cell division ATPase FtsA [Cell division and chromosome partitioning]
Probab=99.70 E-value=7.4e-16 Score=172.41 Aligned_cols=250 Identities=22% Similarity=0.329 Sum_probs=192.4
Q ss_pred eecccCCcCccccccccccCHHHHHhHhhhhccCcchHHHHHHHHHhCCcCCcceEecCCCCCH-HH-------------
Q psy6736 65 INSITGDLTPWDGARLKAVSAQELSRGVKAIFTAPDILKKKTSEDILRKVDGQNEGLIPAYFNI-SS------------- 130 (1023)
Q Consensus 65 ~k~~~g~~~~~~~~~~~~~~~~~v~a~~L~~~~~~~~~l~~~a~~~~~~~~~~~vitVPa~~~~-~q------------- 130 (1023)
++++.....+.++.. +.++.+++ .++.+.|......+...++...|-.|.- .|
T Consensus 86 i~s~~~~g~v~i~~~-~eIt~~DI------------~rvl~~A~~~~~~~~~~ilh~~p~~y~vD~~~~I~dP~gm~G~r 152 (418)
T COG0849 86 IKSQNVNGEVSISEE-KEITQEDI------------ERVLEAAKAVAIPPEREILHVIPQEYIVDGQEGIKDPLGMSGVR 152 (418)
T ss_pred eEEEeeEEEEEcCCC-CccCHHHH------------HHHHHHHHhhccCCCceEEEEeeeEEEECCccccCCccccccce
Confidence 344444443444443 68888888 5666777666655557777777755521 11
Q ss_pred --------------HHHHHHHHHHcCCceeeeecchHHHHHHhccccccCccccccCCCCCcEEEEEEeCCceEEEEEEE
Q psy6736 131 --------------VKSTKDSGTIAGLNVLRIINEPTAAAIAYGLDKKVGSTAVEYNGSGERNVLIFDLGGGTFDVSILT 196 (1023)
Q Consensus 131 --------------r~~l~~Aa~~AGl~~~~li~Ep~AAal~y~~~~~~~~~~~~~~~~~~~~vlV~D~GggT~dvsv~~ 196 (1023)
-+.+.+|.+.+|+++..++.+|.|+|.+...+.. ++.+++++|+||||||+++++
T Consensus 153 L~v~vhvit~~~~~~~Nl~k~v~r~gl~v~~i~l~plAsa~a~L~~dE-----------kelGv~lIDiG~GTTdIai~~ 221 (418)
T COG0849 153 LEVEVHVITGPKNILENLEKCVERAGLKVDNIVLEPLASALAVLTEDE-----------KELGVALIDIGGGTTDIAIYK 221 (418)
T ss_pred EEEEEEEEEcchHHHHHHHHHHHHhCCCeeeEEEehhhhhhhccCccc-----------HhcCeEEEEeCCCcEEEEEEE
Confidence 2779999999999999999999999998766554 678899999999999999997
Q ss_pred EeCCEEEEEEecCCCCccHHHHHHHHHHHHHHHHHhhhccCccccHHHHHHHHHHHHHHhHHcCCCC------ceEEEEe
Q psy6736 197 IEDGIFEVKSTAGDTHLGGEDFDNRMVNHFVQEFKRKYKKDLTTNKRALRRLRTACERAKRTLSSST------QASIEID 270 (1023)
Q Consensus 197 ~~~~~~~v~~~~~~~~lGG~~~D~~l~~~l~~~~~~~~~~~~~~~~~~~~~L~~~ae~~K~~Ls~~~------~~~i~i~ 270 (1023)
-+. + .+.+...+||++++..|+..|.-.+. .||+.|+...... +..+.++
T Consensus 222 ~G~--l---~~~~~ipvgG~~vT~DIa~~l~t~~~-------------------~AE~iK~~~g~a~~~~~~~~~~i~v~ 277 (418)
T COG0849 222 NGA--L---RYTGVIPVGGDHVTKDIAKGLKTPFE-------------------EAERIKIKYGSALISLADDEETIEVP 277 (418)
T ss_pred CCE--E---EEEeeEeeCccHHHHHHHHHhCCCHH-------------------HHHHHHHHcCccccCcCCCcceEecc
Confidence 532 2 22445789999999999988877665 7899999886543 3345565
Q ss_pred cccCCceeEEEecHHHHHHHhHHHHHHHHHHHHHHHHHcCCCccCcCeEEEEcCCCCcHHHHHHHHHHcCCccccc----
Q psy6736 271 SLFEGVDFYTSITRARFEELNADLFRGTMEPVEKSLRDAKMDKAQIHDIVLVGGSTRIPKVQKLLQDFFNGKELNK---- 346 (1023)
Q Consensus 271 ~~~~~~~~~~~itr~~~e~~~~~~~~~i~~~i~~~l~~~~~~~~~i~~V~LvGG~sr~p~v~~~l~~~f~~~~i~~---- 346 (1023)
...+. ....+||.++.+++++.+.+++..+++.|++.++...-...|+|+||++.+|.+.+..++.|+ .+++.
T Consensus 278 ~vg~~--~~~~~t~~~ls~II~aR~~Ei~~lV~~~l~~~g~~~~~~~gvVlTGG~a~l~Gi~elA~~if~-~~vRig~P~ 354 (418)
T COG0849 278 SVGSD--IPRQVTRSELSEIIEARVEEILELVKAELRKSGLPNHLPGGVVLTGGGAQLPGIVELAERIFG-RPVRLGVPL 354 (418)
T ss_pred cCCCc--ccchhhHHHHHHHHHhhHHHHHHHHHHHHHHcCccccCCCeEEEECchhcCccHHHHHHHhcC-CceEeCCCc
Confidence 44333 367899999999999999999999999999999976666789999999999999999999994 33211
Q ss_pred --------cCCCchhHHhHHHHHHHHH
Q psy6736 347 --------SINPDEAVAYGAAVQAAIL 365 (1023)
Q Consensus 347 --------~~~pd~aVa~GAa~~a~~l 365 (1023)
..+|..+.|.|..++++..
T Consensus 355 ~~~Gl~d~~~~p~fs~avGl~~~~~~~ 381 (418)
T COG0849 355 NIVGLTDIARNPAFSTAVGLLLYGALM 381 (418)
T ss_pred cccCchhhccCchhhhhHHHHHHHhhc
Confidence 2368899999999998753
No 58
>PRK15080 ethanolamine utilization protein EutJ; Provisional
Probab=99.59 E-value=9.7e-15 Score=158.03 Aligned_cols=131 Identities=22% Similarity=0.350 Sum_probs=109.7
Q ss_pred EEEEEeCCceEEEEEEEEeCCEEEEEEecCCCCCcHHHHHHHHHHHHHHHHHhhhccCcchhHHHHHHHHHHHHHHhhhc
Q psy6736 637 VLIFDLGGGTFDVSILTIEDGIFEVKSTAGDTHLGGEDFDNRMVNHFVQEFKRKYKKDLTTNKRALRRLRTACERAKRTL 716 (1023)
Q Consensus 637 vlV~D~GggT~dvsi~~~~~~~~~v~~~~gd~~lGG~~~D~~l~~~~~~~~~~~~~~~~~~~~~~~~~L~~~~e~~K~~L 716 (1023)
.+|+|+||||||+++++ ++.+.. + ++..+||++||+.|++++. .+ +.+||++|+.+
T Consensus 137 ~~vvDIGggtt~i~v~~--~g~~~~--~-~~~~~GG~~it~~Ia~~l~--------i~-----------~~eAE~lK~~~ 192 (267)
T PRK15080 137 GAVVDIGGGTTGISILK--DGKVVY--S-ADEPTGGTHMSLVLAGAYG--------IS-----------FEEAEQYKRDP 192 (267)
T ss_pred cEEEEeCCCcEEEEEEE--CCeEEE--E-ecccCchHHHHHHHHHHhC--------CC-----------HHHHHHHHhcc
Confidence 58999999999999975 554332 2 4678999999999987642 11 35788888875
Q ss_pred CCCceeEEEEecccCCcceEEEecHHHHHHHHHHHHHHHHHHHHHHHHHcCCCccccceEEEecCccCcHHHHHHHHHhh
Q psy6736 717 SSSTQASIEIDSLFEGVDFYTSITRARFEELNADLFRGTMEPVEKSLRDAKMDKAQIHDIVLVGGSTRIPKVQKLLQDFF 796 (1023)
Q Consensus 717 s~~~~~~~~i~~~~~~~~~~~~itr~~~~~~~~~~~~~~~~~i~~~l~~~~~~~~~i~~V~LvGG~srip~v~~~l~~~f 796 (1023)
+ +++++.++++++++++.+.+++.|+.. .++.|+|+||+|++|.+++.+++.|
T Consensus 193 ~----------------------~~~~~~~ii~~~~~~i~~~i~~~l~~~-----~~~~IvLtGG~s~lpgl~e~l~~~l 245 (267)
T PRK15080 193 K----------------------HHKEIFPVVKPVVEKMASIVARHIEGQ-----DVEDIYLVGGTCCLPGFEEVFEKQT 245 (267)
T ss_pred C----------------------CHHHHHHHHHHHHHHHHHHHHHHHhcC-----CCCEEEEECCcccchhHHHHHHHHh
Confidence 3 357889999999999999999999853 5789999999999999999999999
Q ss_pred cCcccCCCCCCccceecchHHHH
Q psy6736 797 NGKELNKSINPDEAVAYGAAVQA 819 (1023)
Q Consensus 797 ~~~~~~~~~~p~~aVa~GAa~~a 819 (1023)
+.++..+.||+.++|.|||+||
T Consensus 246 -g~~v~~~~~P~~~~a~Gaa~~~ 267 (267)
T PRK15080 246 -GLPVHKPQHPLFVTPLGIALSC 267 (267)
T ss_pred -CCCcccCCCchHHHHHHHHhhC
Confidence 6778889999999999999875
No 59
>TIGR01174 ftsA cell division protein FtsA. This bacterial cell division protein interacts with FtsZ, the bacterial homolog of tubulin. It is an ATP-binding protein and shows structural similarities to actin and heat shock cognate protein 70.
Probab=99.57 E-value=1.1e-14 Score=166.61 Aligned_cols=159 Identities=23% Similarity=0.369 Sum_probs=121.3
Q ss_pred CCcceEEEEEeCCceEEEEEEEEeCCEEEEEEecCCCCCcHHHHHHHHHHHHHHHHHhhhccCcchhHHHHHHHHHHHHH
Q psy6736 632 SGERNVLIFDLGGGTFDVSILTIEDGIFEVKSTAGDTHLGGEDFDNRMVNHFVQEFKRKYKKDLTTNKRALRRLRTACER 711 (1023)
Q Consensus 632 ~~~~~vlV~D~GggT~dvsi~~~~~~~~~v~~~~gd~~lGG~~~D~~l~~~~~~~~~~~~~~~~~~~~~~~~~L~~~~e~ 711 (1023)
+++..++|+|+||||+|++++. ++.+... ....+||++||+.|+..+. ..+.+||+
T Consensus 193 ~~~~~~~vvDiG~gtt~i~i~~--~g~~~~~---~~i~~GG~~it~~i~~~l~-------------------~~~~~AE~ 248 (371)
T TIGR01174 193 EKELGVCLIDIGGGTTDIAVYT--GGSIRYT---KVIPIGGNHITKDIAKALR-------------------TPLEEAER 248 (371)
T ss_pred hhcCCEEEEEeCCCcEEEEEEE--CCEEEEE---eeecchHHHHHHHHHHHhC-------------------CCHHHHHH
Confidence 3456799999999999999986 4543332 3367999999998876431 12467899
Q ss_pred HhhhcCCC------ceeEEEEecccCCcceEEEecHHHHHHHHHHHHHHHHHHHH-HHHHHcCCCccccce-EEEecCcc
Q psy6736 712 AKRTLSSS------TQASIEIDSLFEGVDFYTSITRARFEELNADLFRGTMEPVE-KSLRDAKMDKAQIHD-IVLVGGST 783 (1023)
Q Consensus 712 ~K~~Ls~~------~~~~~~i~~~~~~~~~~~~itr~~~~~~~~~~~~~~~~~i~-~~l~~~~~~~~~i~~-V~LvGG~s 783 (1023)
+|+.++.. .+..+.++... .+....++|++|++++.+.++++.+.++ +.|++++.. ++++. |+|+||+|
T Consensus 249 lK~~~~~~~~~~~~~~~~i~~~~~~--~~~~~~is~~~l~~ii~~~~~ei~~~i~~~~L~~~~~~-~~i~~gIvLtGG~S 325 (371)
T TIGR01174 249 IKIKYGCASIPLEGPDENIEIPSVG--ERPPRSLSRKELAEIIEARAEEILEIVKQKELRKSGFK-EELNGGIVLTGGGA 325 (371)
T ss_pred HHHHeeEecccCCCCCCEEEeccCC--CCCCeEEcHHHHHHHHHHHHHHHHHHHHHHHHHhcCCc-ccCCCEEEEeChHH
Confidence 99998753 23456665443 3566899999999999999999999997 999998876 66777 99999999
Q ss_pred CcHHHHHHHHHhhcCcccCC------------CCCCccceecchHHH
Q psy6736 784 RIPKVQKLLQDFFNGKELNK------------SINPDEAVAYGAAVQ 818 (1023)
Q Consensus 784 rip~v~~~l~~~f~~~~~~~------------~~~p~~aVa~GAa~~ 818 (1023)
++|.+++.+++.|+. ++.. ..+|..++|.|.++|
T Consensus 326 ~ipgi~~~l~~~~~~-~vr~~~P~~~~~~~~~~~~p~~~~a~Gl~~~ 371 (371)
T TIGR01174 326 QLEGIVELAEKVFDN-PVRIGLPQNIGGLTEDVNDPEYSTAVGLLLY 371 (371)
T ss_pred cccCHHHHHHHHhCC-CeEEECCCccCCchhhcCCcHHHHHHHHHhC
Confidence 999999999999943 2211 125667777776653
No 60
>TIGR02529 EutJ ethanolamine utilization protein EutJ family protein.
Probab=99.57 E-value=1.7e-14 Score=153.26 Aligned_cols=129 Identities=20% Similarity=0.327 Sum_probs=105.7
Q ss_pred EEEEEeCCceEEEEEEEEeCCEEEEEEecCCCCCcHHHHHHHHHHHHHHHHHhhhccCcchhHHHHHHHHHHHHHHhhhc
Q psy6736 637 VLIFDLGGGTFDVSILTIEDGIFEVKSTAGDTHLGGEDFDNRMVNHFVQEFKRKYKKDLTTNKRALRRLRTACERAKRTL 716 (1023)
Q Consensus 637 vlV~D~GggT~dvsi~~~~~~~~~v~~~~gd~~lGG~~~D~~l~~~~~~~~~~~~~~~~~~~~~~~~~L~~~~e~~K~~L 716 (1023)
.+|+|+||||+|+++++ .+.+.. ..+..+||++||+.|++++. .+ +.+||++|+.+
T Consensus 110 ~~vvDiGggtt~i~i~~--~G~i~~---~~~~~~GG~~it~~Ia~~~~--------i~-----------~~~AE~~K~~~ 165 (239)
T TIGR02529 110 GAVVDVGGGTTGISILK--KGKVIY---SADEPTGGTHMSLVLAGAYG--------IS-----------FEEAEEYKRGH 165 (239)
T ss_pred cEEEEeCCCcEEEEEEE--CCeEEE---EEeeecchHHHHHHHHHHhC--------CC-----------HHHHHHHHHhc
Confidence 59999999999999976 444332 34577999999998875431 11 25789999875
Q ss_pred CCCceeEEEEecccCCcceEEEecHHHHHHHHHHHHHHHHHHHHHHHHHcCCCccccceEEEecCccCcHHHHHHHHHhh
Q psy6736 717 SSSTQASIEIDSLFEGVDFYTSITRARFEELNADLFRGTMEPVEKSLRDAKMDKAQIHDIVLVGGSTRIPKVQKLLQDFF 796 (1023)
Q Consensus 717 s~~~~~~~~i~~~~~~~~~~~~itr~~~~~~~~~~~~~~~~~i~~~l~~~~~~~~~i~~V~LvGG~srip~v~~~l~~~f 796 (1023)
+. .+++.+++.++++++...+++.|++. .++.|+|+||+|++|.+++.+++.|
T Consensus 166 ~~----------------------~~~~~~~i~~~~~~i~~~i~~~l~~~-----~~~~v~LtGG~a~ipgl~e~l~~~l 218 (239)
T TIGR02529 166 KD----------------------EEEIFPVVKPVYQKMASIVKRHIEGQ-----GVKDLYLVGGACSFSGFADVFEKQL 218 (239)
T ss_pred CC----------------------HHHHHHHHHHHHHHHHHHHHHHHHhC-----CCCEEEEECchhcchhHHHHHHHHh
Confidence 41 45677899999999999999999864 3578999999999999999999999
Q ss_pred cCcccCCCCCCccceecchHH
Q psy6736 797 NGKELNKSINPDEAVAYGAAV 817 (1023)
Q Consensus 797 ~~~~~~~~~~p~~aVa~GAa~ 817 (1023)
+.++..+.||+++||.|||+
T Consensus 219 -g~~v~~~~~P~~~va~Gaa~ 238 (239)
T TIGR02529 219 -GLNVIKPQHPLYVTPLGIAM 238 (239)
T ss_pred -CCCcccCCCCCeehhheeec
Confidence 67888899999999999986
No 61
>PRK09472 ftsA cell division protein FtsA; Reviewed
Probab=99.51 E-value=9.4e-14 Score=160.61 Aligned_cols=163 Identities=21% Similarity=0.295 Sum_probs=120.3
Q ss_pred CCcceEEEEEeCCceEEEEEEEEeCCEEEEEEecCCCCCcHHHHHHHHHHHHHHHHHhhhccCcchhHHHHHHHHHHHHH
Q psy6736 632 SGERNVLIFDLGGGTFDVSILTIEDGIFEVKSTAGDTHLGGEDFDNRMVNHFVQEFKRKYKKDLTTNKRALRRLRTACER 711 (1023)
Q Consensus 632 ~~~~~vlV~D~GggT~dvsi~~~~~~~~~v~~~~gd~~lGG~~~D~~l~~~~~~~~~~~~~~~~~~~~~~~~~L~~~~e~ 711 (1023)
+++..++|+|+||||||+++++ +|.+....+ ..+||++|++.|+..+. . -+..||+
T Consensus 201 e~~~gv~vvDiGggtTdisv~~--~G~l~~~~~---i~~GG~~it~dIa~~l~--------i-----------~~~~AE~ 256 (420)
T PRK09472 201 ERELGVCVVDIGGGTMDIAVYT--GGALRHTKV---IPYAGNVVTSDIAYAFG--------T-----------PPSDAEA 256 (420)
T ss_pred hhhcCeEEEEeCCCceEEEEEE--CCEEEEEee---eechHHHHHHHHHHHhC--------c-----------CHHHHHH
Confidence 4567799999999999999997 565443332 56999999999875441 1 1357899
Q ss_pred HhhhcC----CC--ceeEEEEecccCCcceEEEecHHHHHHHHHHHHHHHHHHHH-------HHHHHcCCCccccceEEE
Q psy6736 712 AKRTLS----SS--TQASIEIDSLFEGVDFYTSITRARFEELNADLFRGTMEPVE-------KSLRDAKMDKAQIHDIVL 778 (1023)
Q Consensus 712 ~K~~Ls----~~--~~~~~~i~~~~~~~~~~~~itr~~~~~~~~~~~~~~~~~i~-------~~l~~~~~~~~~i~~V~L 778 (1023)
+|+... .. .+..+.++...... ...++|.+|.+++.+.++++++.+. ..|..+++....++.|+|
T Consensus 257 lK~~~g~~~~~~~~~~~~i~v~~~~~~~--~~~i~~~~l~~ii~~r~~ei~~~i~~~l~~~~~~l~~~g~~~~~~~givL 334 (420)
T PRK09472 257 IKVRHGCALGSIVGKDESVEVPSVGGRP--PRSLQRQTLAEVIEPRYTELLNLVNEEILQLQEQLRQQGVKHHLAAGIVL 334 (420)
T ss_pred HHHhcceeccccCCCCceeEecCCCCCC--CeEEcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCcccCCCEEEE
Confidence 986542 21 23456665443222 3489999999999997666666665 455677777778899999
Q ss_pred ecCccCcHHHHHHHHHhhcCcccCC------------CCCCccceecchHHHHHH
Q psy6736 779 VGGSTRIPKVQKLLQDFFNGKELNK------------SINPDEAVAYGAAVQAAI 821 (1023)
Q Consensus 779 vGG~srip~v~~~l~~~f~~~~~~~------------~~~p~~aVa~GAa~~a~~ 821 (1023)
+||+|++|.|++++++.|+ .++.. ..+|..|+|.|.++|+..
T Consensus 335 tGG~a~lpgi~e~~~~~f~-~~vri~~P~~~~g~~~~~~~P~~ata~Gl~~~~~~ 388 (420)
T PRK09472 335 TGGAAQIEGLAACAQRVFH-TQVRIGAPLNITGLTDYAQEPYYSTAVGLLHYGKE 388 (420)
T ss_pred eCchhccccHHHHHHHHhC-CCeEEeCCcccCCChhhcCCcHHHHHHHHHHHhhh
Confidence 9999999999999999994 33221 248999999999999863
No 62
>PF06723 MreB_Mbl: MreB/Mbl protein; InterPro: IPR004753 Bacterial cell shape varies greatly between species, and characteristic morphologies are used for identification purposes. In addition to individual cell shape, the way in which groups of cells are arranged is also typical of some bacterial species, especially Gram-positive coccoids. For many years, it was believed that micro-organisms with other than spheroidal cell shapes maintained morphology by means of their external cell walls. Recently, however, studies of the Gram-positive rod Bacillus subtilis have revealed two related genes that are essential for the integrity of cell morphogenesis []. Termed mreB and mbl, the gene products localise close to the cell surface, forming filamentous helical structures. Many homologues have been found in diverse bacterial groups, suggesting a common ancestor []. The crystal structure of MreB from Thermotoga maritima has been resolved using X-ray crystallography []. It consists of 19 beta-strands and 15 alpha- helices, and shows remarkable structural similarity to eukaryotic actin. MreB crystals also contain proto-filaments, with individual proteins assembling into polymers like F-actin, in the same orientation. It is hypothesised therefore, that MreB was the forerunner of actin in early eukaryotes [].; GO: 0000902 cell morphogenesis; PDB: 1JCF_A 1JCE_A 2WUS_A 1JCG_A.
Probab=99.50 E-value=2.1e-13 Score=149.32 Aligned_cols=167 Identities=23% Similarity=0.382 Sum_probs=125.6
Q ss_pred CCcceEEEEEeCCceEEEEEEEEeCCEEEEEEecCCCCCcHHHHHHHHHHHHHHHHHhhhccCcchhHHHHHHHHHHHHH
Q psy6736 632 SGERNVLIFDLGGGTFDVSILTIEDGIFEVKSTAGDTHLGGEDFDNRMVNHFVQEFKRKYKKDLTTNKRALRRLRTACER 711 (1023)
Q Consensus 632 ~~~~~vlV~D~GggT~dvsi~~~~~~~~~v~~~~gd~~lGG~~~D~~l~~~~~~~~~~~~~~~~~~~~~~~~~L~~~~e~ 711 (1023)
.++...||+|+||||+|++++. -+.+....+ ...||++||++|.+|+.+++.-. + =...||+
T Consensus 142 ~~~~g~miVDIG~GtTdiavis--lggiv~s~s---i~~gG~~~DeaI~~~ir~~y~l~----I---------g~~tAE~ 203 (326)
T PF06723_consen 142 FEPRGSMIVDIGGGTTDIAVIS--LGGIVASRS---IRIGGDDIDEAIIRYIREKYNLL----I---------GERTAEK 203 (326)
T ss_dssp TSSS-EEEEEE-SS-EEEEEEE--TTEEEEEEE---ES-SHHHHHHHHHHHHHHHHSEE---------------HHHHHH
T ss_pred CCCCceEEEEECCCeEEEEEEE--CCCEEEEEE---EEecCcchhHHHHHHHHHhhCcc----c---------CHHHHHH
Confidence 3456799999999999999996 343322222 46899999999999999987421 1 1236889
Q ss_pred HhhhcCCCc----eeEEEEe--cccCCcceEEEecHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcc---cc--ceEEEec
Q psy6736 712 AKRTLSSST----QASIEID--SLFEGVDFYTSITRARFEELNADLFRGTMEPVEKSLRDAKMDKA---QI--HDIVLVG 780 (1023)
Q Consensus 712 ~K~~Ls~~~----~~~~~i~--~~~~~~~~~~~itr~~~~~~~~~~~~~~~~~i~~~l~~~~~~~~---~i--~~V~LvG 780 (1023)
+|+.++... ...+.+. ++..|....+.|+-+++.+.+.+.+.++.+.++++|+.. .++ || +.|+|+|
T Consensus 204 iK~~~g~~~~~~~~~~~~v~Grd~~tGlP~~~~i~~~ev~~ai~~~~~~I~~~i~~~Le~~--pPel~~DI~~~GI~LtG 281 (326)
T PF06723_consen 204 IKIEIGSASPPEEEESMEVRGRDLITGLPKSIEITSSEVREAIEPPVDQIVEAIKEVLEKT--PPELAADILENGIVLTG 281 (326)
T ss_dssp HHHHH-BSS--HHHHEEEEEEEETTTTCEEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHTS---HHHHHHHHHH-EEEES
T ss_pred HHHhcceeeccCCCceEEEECccccCCCcEEEEEcHHHHHHHHHHHHHHHHHHHHHHHHhC--CHHHHHHHHHCCEEEEC
Confidence 999886432 2234443 566788889999999999999999999999999999964 332 33 4699999
Q ss_pred CccCcHHHHHHHHHhhcCcccCCCCCCccceecchHHHH
Q psy6736 781 GSTRIPKVQKLLQDFFNGKELNKSINPDEAVAYGAAVQA 819 (1023)
Q Consensus 781 G~srip~v~~~l~~~f~~~~~~~~~~p~~aVa~GAa~~a 819 (1023)
|+|+++.+.++|++.+ +.++....||..|||.||....
T Consensus 282 Gga~l~Gl~~~i~~~~-~~pV~va~~P~~~va~G~~~~l 319 (326)
T PF06723_consen 282 GGALLRGLDEYISEET-GVPVRVADDPLTAVARGAGKLL 319 (326)
T ss_dssp GGGGSBTHHHHHHHHH-SS-EEE-SSTTTHHHHHHHHTT
T ss_pred hhhhhccHHHHHHHHH-CCCEEEcCCHHHHHHHHHHHHH
Confidence 9999999999999999 6889999999999999998765
No 63
>COG4820 EutJ Ethanolamine utilization protein, possible chaperonin [Amino acid transport and metabolism]
Probab=99.49 E-value=3.1e-14 Score=137.06 Aligned_cols=192 Identities=24% Similarity=0.309 Sum_probs=151.9
Q ss_pred hHHHHHHHHHhCCcCCcceEecCCCCCHHHHHHHHHHHHHcCCceeeeecchHHHHHHhccccccCccccccCCCCCcEE
Q psy6736 101 ILKKKTSEDILRKVDGQNEGLIPAYFNISSVKSTKDSGTIAGLNVLRIINEPTAAAIAYGLDKKVGSTAVEYNGSGERNV 180 (1023)
Q Consensus 101 ~~l~~~a~~~~~~~~~~~vitVPa~~~~~qr~~l~~Aa~~AGl~~~~li~Ep~AAal~y~~~~~~~~~~~~~~~~~~~~v 180 (1023)
+++++.+|+.+|..+.++.-++|+.-.....+...+..+.||++++..++||+|||.-..+.. -
T Consensus 79 rrlkd~lEk~lGi~~tha~taiPPGt~~~~~ri~iNViESAGlevl~vlDEPTAaa~vL~l~d----------------g 142 (277)
T COG4820 79 RRLKDTLEKQLGIRFTHAATAIPPGTEQGDPRISINVIESAGLEVLHVLDEPTAAADVLQLDD----------------G 142 (277)
T ss_pred HHHHHHHHHhhCeEeeeccccCCCCccCCCceEEEEeecccCceeeeecCCchhHHHHhccCC----------------C
Confidence 899999999999999999999999998888888889999999999999999999986554433 2
Q ss_pred EEEEeCCceEEEEEEEEeCCEEEEEEecCCCCccHHHHHHHHHHHHHHHHHhhhccCccccHHHHHHHHHHHHHHhHHcC
Q psy6736 181 LIFDLGGGTFDVSILTIEDGIFEVKSTAGDTHLGGEDFDNRMVNHFVQEFKRKYKKDLTTNKRALRRLRTACERAKRTLS 260 (1023)
Q Consensus 181 lV~D~GggT~dvsv~~~~~~~~~v~~~~~~~~lGG~~~D~~l~~~l~~~~~~~~~~~~~~~~~~~~~L~~~ae~~K~~Ls 260 (1023)
.|+|+|||||-+|+++-++-.+ +.|...||.++...|+-+..-.+ ++||..|+.--
T Consensus 143 ~VVDiGGGTTGIsi~kkGkViy-----~ADEpTGGtHmtLvlAG~ygi~~-------------------EeAE~~Kr~~k 198 (277)
T COG4820 143 GVVDIGGGTTGISIVKKGKVIY-----SADEPTGGTHMTLVLAGNYGISL-------------------EEAEQYKRGHK 198 (277)
T ss_pred cEEEeCCCcceeEEEEcCcEEE-----eccCCCCceeEEEEEecccCcCH-------------------hHHHHhhhccc
Confidence 7999999999999998755443 45677888887766654322222 26676665431
Q ss_pred CCCceEEEEecccCCceeEEEecHHHHHHHhHHHHHHHHHHHHHHHHHcCCCccCcCeEEEEcCCCCcHHHHHHHHHHcC
Q psy6736 261 SSTQASIEIDSLFEGVDFYTSITRARFEELNADLFRGTMEPVEKSLRDAKMDKAQIHDIVLVGGSTRIPKVQKLLQDFFN 340 (1023)
Q Consensus 261 ~~~~~~i~i~~~~~~~~~~~~itr~~~e~~~~~~~~~i~~~i~~~l~~~~~~~~~i~~V~LvGG~sr~p~v~~~l~~~f~ 340 (1023)
.. +|.-..+.|+++++.+.+.+-++..+ +..++|+||+|.-|.+.+..++.|
T Consensus 199 ~~----------------------~Eif~~v~PV~eKMAeIv~~hie~~~-----i~dl~lvGGac~~~g~e~~Fe~~l- 250 (277)
T COG4820 199 KG----------------------EEIFPVVKPVYEKMAEIVARHIEGQG-----ITDLWLVGGACMQPGVEELFEKQL- 250 (277)
T ss_pred cc----------------------hhcccchhHHHHHHHHHHHHHhccCC-----CcceEEecccccCccHHHHHHHHh-
Confidence 11 12222467889999999998888766 466999999999999999999999
Q ss_pred CccccccCCCchhHHhHHHH
Q psy6736 341 GKELNKSINPDEAVAYGAAV 360 (1023)
Q Consensus 341 ~~~i~~~~~pd~aVa~GAa~ 360 (1023)
+.++..+..|....-.|-|+
T Consensus 251 ~l~v~~P~~p~y~TPLgIA~ 270 (277)
T COG4820 251 ALQVHLPQHPLYMTPLGIAS 270 (277)
T ss_pred ccccccCCCcceechhhhhh
Confidence 88898888888777777664
No 64
>cd00012 ACTIN Actin; An ubiquitous protein involved in the formation of filaments that are a major component of the cytoskeleton. Interaction with myosin provides the basis of muscular contraction and many aspects of cell motility. Each actin protomer binds one molecule of ATP and either calcium or magnesium ions. Actin exists as a monomer in low salt concentrations, but filaments form rapidly as salt concentration rises, with the consequent hydrolysis of ATP. Polymerization is regulated by so-called capping proteins. The ATPase domain of actin shares similarity with ATPase domains of hexokinase and hsp70 proteins.
Probab=99.32 E-value=2.6e-11 Score=139.13 Aligned_cols=245 Identities=18% Similarity=0.122 Sum_probs=156.8
Q ss_pred cccCHHHHHhHhhhhccCcchHHHHHHHHHhCCcCCcceEecCCCCCHHHHHHHHH-HHHHcCCceeeeecchHHHHHHh
Q psy6736 81 KAVSAQELSRGVKAIFTAPDILKKKTSEDILRKVDGQNEGLIPAYFNISSVKSTKD-SGTIAGLNVLRIINEPTAAAIAY 159 (1023)
Q Consensus 81 ~~~~~~~v~a~~L~~~~~~~~~l~~~a~~~~~~~~~~~vitVPa~~~~~qr~~l~~-Aa~~AGl~~~~li~Ep~AAal~y 159 (1023)
+.+..-+....++ +++....-. ....-..++|++|..++..+|+.+.+ +.+..|+..+.++.+|.+|++++
T Consensus 69 G~i~d~~~~e~~~-------~~~~~~~l~-~~~~~~~vvl~~p~~~~~~~r~~~~e~lfe~~~~~~v~~~~~~~~a~~~~ 140 (371)
T cd00012 69 GIVVDWDDMEKIW-------DHLFFNELK-VNPEEHPVLLTEPPLNPKSNREKTTEIMFETFNVPALYVAIQAVLSLYAS 140 (371)
T ss_pred CEEeCHHHHHHHH-------HHHHHHhcC-CCCCCCceEEecCCCCCHHHHHHHHHHhhccCCCCEEEEechHHHHHHhc
Confidence 3444445555555 565543211 12224679999999999888888766 56779999999999999999987
Q ss_pred ccccccCccccccCCCCCcEEEEEEeCCceEEEEEEEEeCCEEEEEEecCCCCccHHHHHHHHHHHHHHHHHhhhccCcc
Q psy6736 160 GLDKKVGSTAVEYNGSGERNVLIFDLGGGTFDVSILTIEDGIFEVKSTAGDTHLGGEDFDNRMVNHFVQEFKRKYKKDLT 239 (1023)
Q Consensus 160 ~~~~~~~~~~~~~~~~~~~~vlV~D~GggT~dvsv~~~~~~~~~v~~~~~~~~lGG~~~D~~l~~~l~~~~~~~~~~~~~ 239 (1023)
+. .+.+|+|+|+++|+++.+.- +.. +........+||.++|+.|.+++...... .+.
T Consensus 141 g~----------------~~~lVVDiG~~~t~i~pv~~--G~~-~~~~~~~~~~GG~~l~~~l~~~l~~~~~~---~~~- 197 (371)
T cd00012 141 GR----------------TTGLVVDSGDGVTHVVPVYD--GYV-LPHAIKRLDLAGRDLTRYLKELLRERGYE---LNS- 197 (371)
T ss_pred CC----------------CeEEEEECCCCeeEEEEEEC--CEE-chhhheeccccHHHHHHHHHHHHHhcCCC---ccc-
Confidence 53 35799999999999988764 222 11222346899999999999988654310 011
Q ss_pred ccHHHHHHHHHHHHHHhHHcCCCCce-------------EEE-EecccCCceeEEEecHHHH---HHHhHHH-----HHH
Q psy6736 240 TNKRALRRLRTACERAKRTLSSSTQA-------------SIE-IDSLFEGVDFYTSITRARF---EELNADL-----FRG 297 (1023)
Q Consensus 240 ~~~~~~~~L~~~ae~~K~~Ls~~~~~-------------~i~-i~~~~~~~~~~~~itr~~~---e~~~~~~-----~~~ 297 (1023)
..-...++.+|+.+..-... ... ...+.++. .+.+..+.| |-++.|. ...
T Consensus 198 ------~~~~~~~~~iKe~~~~v~~~~~~~~~~~~~~~~~~~~~~~lpd~~--~i~~~~er~~~~E~lF~p~~~~~~~~~ 269 (371)
T cd00012 198 ------SDEREIVRDIKEKLCYVALDIEEEQDKSAKETSLLEKTYELPDGR--TIKVGNERFRAPEILFNPSLIGSEQVG 269 (371)
T ss_pred ------hhHHHHHHHHHHhheeecCCHHHHHHhhhccCCccceeEECCCCe--EEEEChHHhhChHhcCChhhcCCCcCC
Confidence 11122456666654321100 000 01112222 345555444 2334432 337
Q ss_pred HHHHHHHHHHHcCCC--ccCcCeEEEEcCCCCcHHHHHHHHHHcC----C-----ccccccCCCchhHHhHHHHHHHH
Q psy6736 298 TMEPVEKSLRDAKMD--KAQIHDIVLVGGSTRIPKVQKLLQDFFN----G-----KELNKSINPDEAVAYGAAVQAAI 364 (1023)
Q Consensus 298 i~~~i~~~l~~~~~~--~~~i~~V~LvGG~sr~p~v~~~l~~~f~----~-----~~i~~~~~pd~aVa~GAa~~a~~ 364 (1023)
+.+.|.+++...... ..-++.|+|+||+|++|.+.++|.+.+. . ..+....+|..++-.||+++|..
T Consensus 270 i~~~i~~~i~~~~~~~~~~l~~~Ivl~GG~s~~~gl~~rl~~el~~~~~~~~~~~~~~~~~~~~~~~aw~G~si~as~ 347 (371)
T cd00012 270 ISEAIYSSINKCDIDLRKDLYSNIVLSGGSTLFPGFGERLQKELLKLAPPSKDTKVKVIAPPERKYSVWLGGSILASL 347 (371)
T ss_pred HHHHHHHHHHhCCHhHHHHHHhCEEEeCCccCCcCHHHHHHHHHHHhCCcccceEEEEccCCCccccEEeCchhhcCc
Confidence 788888888876432 2335779999999999999999988763 1 12344568899999999999854
No 65
>COG0849 ftsA Cell division ATPase FtsA [Cell division and chromosome partitioning]
Probab=99.30 E-value=2.1e-11 Score=136.87 Aligned_cols=173 Identities=24% Similarity=0.405 Sum_probs=135.0
Q ss_pred CCCCccCCCCcceEEEEEeCCceEEEEEEEEeCCEEEEEEecCCCCCcHHHHHHHHHHHHHHHHHhhhccCcchhHHHHH
Q psy6736 624 PGPTIEEGSGERNVLIFDLGGGTFDVSILTIEDGIFEVKSTAGDTHLGGEDFDNRMVNHFVQEFKRKYKKDLTTNKRALR 703 (1023)
Q Consensus 624 ~~~~~~~~~~~~~vlV~D~GggT~dvsi~~~~~~~~~v~~~~gd~~lGG~~~D~~l~~~~~~~~~~~~~~~~~~~~~~~~ 703 (1023)
+...+.+.+++-.++++|+||||+|+++++ +|.+....+ ..+||++++..|+.-|.-.+
T Consensus 192 a~a~L~~dEkelGv~lIDiG~GTTdIai~~--~G~l~~~~~---ipvgG~~vT~DIa~~l~t~~---------------- 250 (418)
T COG0849 192 ALAVLTEDEKELGVALIDIGGGTTDIAIYK--NGALRYTGV---IPVGGDHVTKDIAKGLKTPF---------------- 250 (418)
T ss_pred hhhccCcccHhcCeEEEEeCCCcEEEEEEE--CCEEEEEee---EeeCccHHHHHHHHHhCCCH----------------
Confidence 344566778889999999999999999987 676555444 66999999999987654333
Q ss_pred HHHHHHHHHhhhcCC------CceeEEEEecccCCcceEEEecHHHHHHHHHHHHHHHHHHHHHHHHHcCCCccccceEE
Q psy6736 704 RLRTACERAKRTLSS------STQASIEIDSLFEGVDFYTSITRARFEELNADLFRGTMEPVEKSLRDAKMDKAQIHDIV 777 (1023)
Q Consensus 704 ~L~~~~e~~K~~Ls~------~~~~~~~i~~~~~~~~~~~~itr~~~~~~~~~~~~~~~~~i~~~l~~~~~~~~~i~~V~ 777 (1023)
..||+.|+.... .....+.++...+. ....+||.++.+++++.+.+++..+++.|++.++...-...|+
T Consensus 251 ---~~AE~iK~~~g~a~~~~~~~~~~i~v~~vg~~--~~~~~t~~~ls~II~aR~~Ei~~lV~~~l~~~g~~~~~~~gvV 325 (418)
T COG0849 251 ---EEAERIKIKYGSALISLADDEETIEVPSVGSD--IPRQVTRSELSEIIEARVEEILELVKAELRKSGLPNHLPGGVV 325 (418)
T ss_pred ---HHHHHHHHHcCccccCcCCCcceEecccCCCc--ccchhhHHHHHHHHHhhHHHHHHHHHHHHHHcCccccCCCeEE
Confidence 367888877632 23345666554333 3778999999999999999999999999999999877778899
Q ss_pred EecCccCcHHHHHHHHHhhcCc-ccCC----------CCCCccceecchHHHHHHH
Q psy6736 778 LVGGSTRIPKVQKLLQDFFNGK-ELNK----------SINPDEAVAYGAAVQAAIL 822 (1023)
Q Consensus 778 LvGG~srip~v~~~l~~~f~~~-~~~~----------~~~p~~aVa~GAa~~a~~l 822 (1023)
|+||++.||.+.+..++.|+.. ++.. ..+|..+.|.|..+|++..
T Consensus 326 lTGG~a~l~Gi~elA~~if~~~vRig~P~~~~Gl~d~~~~p~fs~avGl~~~~~~~ 381 (418)
T COG0849 326 LTGGGAQLPGIVELAERIFGRPVRLGVPLNIVGLTDIARNPAFSTAVGLLLYGALM 381 (418)
T ss_pred EECchhcCccHHHHHHHhcCCceEeCCCccccCchhhccCchhhhhHHHHHHHhhc
Confidence 9999999999999999999421 1111 2368899999999998754
No 66
>COG1077 MreB Actin-like ATPase involved in cell morphogenesis [Cell division and chromosome partitioning]
Probab=99.27 E-value=3.5e-11 Score=126.30 Aligned_cols=170 Identities=19% Similarity=0.354 Sum_probs=132.1
Q ss_pred ceEEEEEeCCceEEEEEEEEeCCEEEEEEecCCCCCcHHHHHHHHHHHHHHHHHhhhccCcchhHHHHHHHHHHHHHHhh
Q psy6736 635 RNVLIFDLGGGTFDVSILTIEDGIFEVKSTAGDTHLGGEDFDNRMVNHFVQEFKRKYKKDLTTNKRALRRLRTACERAKR 714 (1023)
Q Consensus 635 ~~vlV~D~GggT~dvsi~~~~~~~~~v~~~~gd~~lGG~~~D~~l~~~~~~~~~~~~~~~~~~~~~~~~~L~~~~e~~K~ 714 (1023)
..-||||+||||+|+.++.+.+ .+.- ....+||+.||++|++|+.++++--.+ . ..+|++|+
T Consensus 153 ~G~mvvDIGgGTTevaVISlgg-iv~~----~Sirv~GD~~De~Ii~yvr~~~nl~IG------e-------~taE~iK~ 214 (342)
T COG1077 153 TGSMVVDIGGGTTEVAVISLGG-IVSS----SSVRVGGDKMDEAIIVYVRKKYNLLIG------E-------RTAEKIKI 214 (342)
T ss_pred CCCEEEEeCCCceeEEEEEecC-EEEE----eeEEEecchhhHHHHHHHHHHhCeeec------H-------HHHHHHHH
Confidence 4578999999999999998743 2211 114689999999999999988753221 1 23677777
Q ss_pred hcCC--------CceeEEEEecccCCcceEEEecHHHHHHHHHHHHHHHHHHHHHHHHHcC--CCccccce-EEEecCcc
Q psy6736 715 TLSS--------STQASIEIDSLFEGVDFYTSITRARFEELNADLFRGTMEPVEKSLRDAK--MDKAQIHD-IVLVGGST 783 (1023)
Q Consensus 715 ~Ls~--------~~~~~~~i~~~~~~~~~~~~itr~~~~~~~~~~~~~~~~~i~~~l~~~~--~~~~~i~~-V~LvGG~s 783 (1023)
.... ..+.++.-.++..|..-.++++-++..+..++.++++++.++..|+... +..+-++. ++|+||+|
T Consensus 215 eiG~a~~~~~~~~~~~eV~Grdl~~GlPk~i~i~s~ev~eal~~~v~~Iveair~~Le~tpPeL~~DI~ergivltGGGa 294 (342)
T COG1077 215 EIGSAYPEEEDEELEMEVRGRDLVTGLPKTITINSEEIAEALEEPLNGIVEAIRLVLEKTPPELAADIVERGIVLTGGGA 294 (342)
T ss_pred HhcccccccCCccceeeEEeeecccCCCeeEEEcHHHHHHHHHHHHHHHHHHHHHHHhhCCchhcccHhhCceEEecchH
Confidence 7532 1223344445667777789999999999999999999999999999853 44444555 99999999
Q ss_pred CcHHHHHHHHHhhcCcccCCCCCCccceecchHHHHHHHh
Q psy6736 784 RIPKVQKLLQDFFNGKELNKSINPDEAVAYGAAVQAAILH 823 (1023)
Q Consensus 784 rip~v~~~l~~~f~~~~~~~~~~p~~aVa~GAa~~a~~l~ 823 (1023)
.+..+.+.|++.. +.++....+|-.|||+|+......+.
T Consensus 295 lLrglD~~i~~et-~~pv~ia~~pL~~Va~G~G~~le~~~ 333 (342)
T COG1077 295 LLRGLDRLLSEET-GVPVIIADDPLTCVAKGTGKALEALD 333 (342)
T ss_pred HhcCchHhHHhcc-CCeEEECCChHHHHHhccchhhhhhH
Confidence 9999999999987 66777888999999999998887653
No 67
>smart00268 ACTIN Actin. ACTIN subfamily of ACTIN/mreB/sugarkinase/Hsp70 superfamily
Probab=99.24 E-value=7.4e-11 Score=135.58 Aligned_cols=245 Identities=18% Similarity=0.138 Sum_probs=152.0
Q ss_pred cccccccCHHHHHhHhhhhccCcchHHHHHHHHHhCC--cCCcceEecCCCCCHHHHHHHHHHH-HHcCCceeeeecchH
Q psy6736 77 GARLKAVSAQELSRGVKAIFTAPDILKKKTSEDILRK--VDGQNEGLIPAYFNISSVKSTKDSG-TIAGLNVLRIINEPT 153 (1023)
Q Consensus 77 ~~~~~~~~~~~v~a~~L~~~~~~~~~l~~~a~~~~~~--~~~~~vitVPa~~~~~qr~~l~~Aa-~~AGl~~~~li~Ep~ 153 (1023)
+.+.+.+..-+....++ +++... .++. .-..++||+|...+..+|+.+.+.+ +..|++.+.++.+|.
T Consensus 65 P~~~G~i~d~~~~e~i~-------~~~~~~---~l~~~~~~~~vll~~p~~~~~~~r~~~~e~lfE~~~~~~v~~~~~~~ 134 (373)
T smart00268 65 PIEHGIVENWDDMEKIW-------DYTFFN---ELRVEPEEHPVLLTEPPMNPKSNREKILEIMFETFNFPALYIAIQAV 134 (373)
T ss_pred CCcCCEEeCHHHHHHHH-------HHHHhh---hcCCCCccCeeEEecCCCCCHHHHHHHHHHhhccCCCCeEEEeccHH
Confidence 33445566666666666 666653 2332 2357899999999999999988776 577999999999999
Q ss_pred HHHHHhccccccCccccccCCCCCcEEEEEEeCCceEEEEEEEEeCCEEEEEEecCCCCccHHHHHHHHHHHHHHHHHhh
Q psy6736 154 AAAIAYGLDKKVGSTAVEYNGSGERNVLIFDLGGGTFDVSILTIEDGIFEVKSTAGDTHLGGEDFDNRMVNHFVQEFKRK 233 (1023)
Q Consensus 154 AAal~y~~~~~~~~~~~~~~~~~~~~vlV~D~GggT~dvsv~~~~~~~~~v~~~~~~~~lGG~~~D~~l~~~l~~~~~~~ 233 (1023)
||+++++ ..+.+|+|+|+++|+++.+.- +.. +........+||.++|+.|.+++...-.
T Consensus 135 ~a~~~~g----------------~~~~lVVDiG~~~t~v~pv~~--G~~-~~~~~~~~~~GG~~l~~~l~~~l~~~~~-- 193 (373)
T smart00268 135 LSLYASG----------------RTTGLVIDSGDGVTHVVPVVD--GYV-LPHAIKRIDIAGRDLTDYLKELLSERGY-- 193 (373)
T ss_pred HHHHhCC----------------CCEEEEEecCCCcceEEEEEC--CEE-chhhheeccCcHHHHHHHHHHHHHhcCC--
Confidence 9998875 246799999999999998873 322 1122223579999999999988766100
Q ss_pred hccCccccHHHHHHHHHHHHHHhHHcCCCC-----------------ceEEEEecccCCceeEEEecHHHH---HHHhHH
Q psy6736 234 YKKDLTTNKRALRRLRTACERAKRTLSSST-----------------QASIEIDSLFEGVDFYTSITRARF---EELNAD 293 (1023)
Q Consensus 234 ~~~~~~~~~~~~~~L~~~ae~~K~~Ls~~~-----------------~~~i~i~~~~~~~~~~~~itr~~~---e~~~~~ 293 (1023)
.... ..-...++.+|+.+..-. ...... .+.+|..+ .+..+.| |-++.|
T Consensus 194 -~~~~-------~~~~~~~~~iKe~~~~v~~~~~~~~~~~~~~~~~~~~~~~~-~lpdg~~~--~~~~er~~~~E~lf~p 262 (373)
T smart00268 194 -QFNS-------SAEFEIVREIKEKLCYVAEDFEKEMKKARESSESSKLEKTY-ELPDGNTI--KVGNERFRIPEILFKP 262 (373)
T ss_pred -CCCc-------HHHHHHHHHhhhheeeecCChHHHHHHhhhcccccccceeE-ECCCCCEE--EEChHHeeCchhcCCc
Confidence 0000 011223445554432110 000011 12233333 3333322 223333
Q ss_pred H-----HHHHHHHHHHHHHHcCCC--ccCcCeEEEEcCCCCcHHHHHHHHHHc----CC---ccccccCCCchhHHhHHH
Q psy6736 294 L-----FRGTMEPVEKSLRDAKMD--KAQIHDIVLVGGSTRIPKVQKLLQDFF----NG---KELNKSINPDEAVAYGAA 359 (1023)
Q Consensus 294 ~-----~~~i~~~i~~~l~~~~~~--~~~i~~V~LvGG~sr~p~v~~~l~~~f----~~---~~i~~~~~pd~aVa~GAa 359 (1023)
. ...+.+.|.++|..+... ..=.+.|+|+||+|++|.+.++|.+.+ +. ..+....++..++=.||+
T Consensus 263 ~~~~~~~~~i~~~i~~~i~~~~~d~r~~l~~nIvltGG~s~i~Gl~~RL~~el~~~~p~~~~v~v~~~~~~~~~~W~G~s 342 (373)
T smart00268 263 ELIGLEQKGIHELVYESIQKCDIDVRKDLYENIVLSGGSTLIPGFGERLEKELKQLAPKKLKVKVIAPPERKYSVWLGGS 342 (373)
T ss_pred hhcCCCcCCHHHHHHHHHHhCCHhHHHHHHhCeEeecccccCcCHHHHHHHHHHHhCCCCceeEEecCCCCccceEeCcc
Confidence 1 236778888888776432 112356999999999999999998776 21 123334456677778888
Q ss_pred HHHH
Q psy6736 360 VQAA 363 (1023)
Q Consensus 360 ~~a~ 363 (1023)
++|.
T Consensus 343 ilas 346 (373)
T smart00268 343 ILAS 346 (373)
T ss_pred cccC
Confidence 7774
No 68
>PRK13917 plasmid segregation protein ParM; Provisional
Probab=99.24 E-value=6.1e-10 Score=125.13 Aligned_cols=216 Identities=14% Similarity=0.162 Sum_probs=139.4
Q ss_pred cCCcce--EecCCCCCHHH-HHHHHHHHHHc------C------CceeeeecchHHHHHHhccccccCccccccCCCCCc
Q psy6736 114 VDGQNE--GLIPAYFNISS-VKSTKDSGTIA------G------LNVLRIINEPTAAAIAYGLDKKVGSTAVEYNGSGER 178 (1023)
Q Consensus 114 ~~~~~v--itVPa~~~~~q-r~~l~~Aa~~A------G------l~~~~li~Ep~AAal~y~~~~~~~~~~~~~~~~~~~ 178 (1023)
.+.+++ ...|..+-..+ ++.+++..... | ++.+.++.||.+|.+++........ .....+..
T Consensus 109 ~~~~v~l~tGLPv~~~~~~~~~~l~k~l~~~~~v~~~g~~~~I~i~~V~V~pQ~~ga~~~~~~~~~g~~---~~~~~~~~ 185 (344)
T PRK13917 109 EVVEVVVATGMPSEEIGTDKVAKFEKLLNKSRLIEINGIAVTINVKGVKVVAQPMGTLLDLYLDNDGVV---ADKAFEEG 185 (344)
T ss_pred CcceeEEEEcCCHHHHHHHHHHHHHHHhcCceEEEECCEEEEEEEEEEEEecccHHHHHHHHhcccCcc---cchhcccC
Confidence 344454 58996664344 46676654221 1 2346789999999888766532110 00011345
Q ss_pred EEEEEEeCCceEEEEEEEEeCCEEEEEEecCCCCccHHHHHHHHHHHHHHHHHhhhccCccccHHHHHHHHHHHHHHhHH
Q psy6736 179 NVLIFDLGGGTFDVSILTIEDGIFEVKSTAGDTHLGGEDFDNRMVNHFVQEFKRKYKKDLTTNKRALRRLRTACERAKRT 258 (1023)
Q Consensus 179 ~vlV~D~GggT~dvsv~~~~~~~~~v~~~~~~~~lGG~~~D~~l~~~l~~~~~~~~~~~~~~~~~~~~~L~~~ae~~K~~ 258 (1023)
.++|+|+|+||||++++. +..+. ...++....|..++.+.|.+++..+.. +..+ +. .++.+..+
T Consensus 186 ~ilvIDIG~~TtD~~v~~--~~~~~-~~~s~s~~~G~~~~~~~I~~~i~~~~~---~~~~--~~---~~ie~~l~----- 249 (344)
T PRK13917 186 KVSVIDFGSGTTDLDTIQ--NLKRV-EEESFVIPKGTIDVYKRIASHISKKEE---GASI--TP---YMLEKGLE----- 249 (344)
T ss_pred cEEEEEcCCCcEEEEEEe--CcEEc-ccccccccchHHHHHHHHHHHHHhhCC---CCCC--CH---HHHHHHHH-----
Confidence 789999999999999986 33332 233444778999999999888854321 2222 11 12221211
Q ss_pred cCCCCceEEEEecccCCceeEEEecHHHHHHHhHHHHHHHHHHHHHHHHHcCCCccCcCeEEEEcCCCCcHHHHHHHHHH
Q psy6736 259 LSSSTQASIEIDSLFEGVDFYTSITRARFEELNADLFRGTMEPVEKSLRDAKMDKAQIHDIVLVGGSTRIPKVQKLLQDF 338 (1023)
Q Consensus 259 Ls~~~~~~i~i~~~~~~~~~~~~itr~~~e~~~~~~~~~i~~~i~~~l~~~~~~~~~i~~V~LvGG~sr~p~v~~~l~~~ 338 (1023)
.. .+.+. .+.. +.+ ++++.++++++++++.+.|...+.. ..+++.|+|+||++++ +++.|++.
T Consensus 250 --~g---~i~~~---~~~~--id~-~~~~~~~~~~~~~~i~~~i~~~~~~----~~~~d~IiL~GGGA~l--l~~~lk~~ 312 (344)
T PRK13917 250 --YG---ACKLN---QKTV--IDF-KDEFYKEQDSVIDEVMSGFEIAVGN----INSFDRVIVTGGGANI--FFDSLSHW 312 (344)
T ss_pred --cC---cEEeC---CCce--Eeh-HHHHHHHHHHHHHHHHHHHHHHhcc----cCCCCEEEEECCcHHH--HHHHHHHH
Confidence 11 11111 1111 222 4567788999999999988888753 3478999999999987 88999999
Q ss_pred cCCccccccCCCchhHHhHHHHHHHHHhC
Q psy6736 339 FNGKELNKSINPDEAVAYGAAVQAAILHG 367 (1023)
Q Consensus 339 f~~~~i~~~~~pd~aVa~GAa~~a~~l~~ 367 (1023)
|+.. ....||..|.|+|...+|..+.+
T Consensus 313 f~~~--~~~~~p~~ANa~G~~~~g~~~~~ 339 (344)
T PRK13917 313 YSDV--EKADESQFANVRGYYKYGELLKN 339 (344)
T ss_pred cCCe--EEcCChHHHHHHHHHHHHHHHhc
Confidence 9654 45679999999999999987654
No 69
>TIGR03739 PRTRC_D PRTRC system protein D. A novel genetic system characterized by six major proteins, included a ParB homolog and a ThiF homolog, is designated PRTRC, or ParB-Related,ThiF-Related Cassette. It is often found on plasmids. This protein family is designated PRTRC system protein D. The gray zone, between trusted and noise, includes proteins found in the same genomes as other proteins of the PRTRC systems, but not in the same contiguous gene region.
Probab=98.99 E-value=1.2e-08 Score=114.17 Aligned_cols=209 Identities=17% Similarity=0.149 Sum_probs=131.5
Q ss_pred cCCcceEecCCCCCHHHHHHHHHHHHHc---------CCceeeeecchHHHHHHhccccccCccccccCCCCCcEEEEEE
Q psy6736 114 VDGQNEGLIPAYFNISSVKSTKDSGTIA---------GLNVLRIINEPTAAAIAYGLDKKVGSTAVEYNGSGERNVLIFD 184 (1023)
Q Consensus 114 ~~~~~vitVPa~~~~~qr~~l~~Aa~~A---------Gl~~~~li~Ep~AAal~y~~~~~~~~~~~~~~~~~~~~vlV~D 184 (1023)
.+..+|+..|..+-..||+.+++..... -++.+.++.||.+|.++|....... . .....++|+|
T Consensus 101 ~~~~lv~GLP~~~~~~~k~~l~~~l~g~~~~~~~~~i~I~~V~V~PQ~~Ga~~~~~~~~~~~-----~--~~~~~~lVID 173 (320)
T TIGR03739 101 EIDQLVVGLPVATLTTYKSALEKAVTGEHDIGAGKAVTVRKVLAVPQPQGALVHFVAQHGKL-----L--TGKEQSLIID 173 (320)
T ss_pred CCCEEEECCCHHHHHHHHHHHHHHhccceecCCceEEEEEEEEEeCCChHHHHHHHhcCCCc-----c--cCcCcEEEEe
Confidence 3557999999888888899998876532 2355789999999988876543210 0 1455689999
Q ss_pred eCCceEEEEEEEEeCCEEEEEEecCCCCccHHHHHHHHHHHHHHHHHhhhccCccccHHHHHHHHHHHHHHhHHcCCCCc
Q psy6736 185 LGGGTFDVSILTIEDGIFEVKSTAGDTHLGGEDFDNRMVNHFVQEFKRKYKKDLTTNKRALRRLRTACERAKRTLSSSTQ 264 (1023)
Q Consensus 185 ~GggT~dvsv~~~~~~~~~v~~~~~~~~lGG~~~D~~l~~~l~~~~~~~~~~~~~~~~~~~~~L~~~ae~~K~~Ls~~~~ 264 (1023)
+|++|||+.++. +..+ +...++....|-.++-+.+.+.+.+++. .+...+...+.. ....-|.
T Consensus 174 IG~~TtD~~~~~--~~~~-~~~~s~s~~~G~~~~~~~I~~~i~~~~g----~~~~~~~~~i~~---~l~~g~~------- 236 (320)
T TIGR03739 174 PGYFTFDWLVAR--GMRL-VQKRSGSVNGGMSDIYRLLAAEISKDIG----TPAYRDIDRIDL---ALRTGKQ------- 236 (320)
T ss_pred cCCCeeeeehcc--CCEE-cccccCCchhHHHHHHHHHHHHHHhhcC----CCCccCHHHHHH---HHHhCCc-------
Confidence 999999997764 3443 3444555778988888888888777654 221111111111 1111110
Q ss_pred eEEEEecccCCceeEEEecHHHHHHHhHHHHHHHHHHHHHHHHHcCCCccCcCeEEEEcCCCCcHHHHHHHHHHcCCccc
Q psy6736 265 ASIEIDSLFEGVDFYTSITRARFEELNADLFRGTMEPVEKSLRDAKMDKAQIHDIVLVGGSTRIPKVQKLLQDFFNGKEL 344 (1023)
Q Consensus 265 ~~i~i~~~~~~~~~~~~itr~~~e~~~~~~~~~i~~~i~~~l~~~~~~~~~i~~V~LvGG~sr~p~v~~~l~~~f~~~~i 344 (1023)
+.+ .+.. +.|+ +.++ .....+++++..+.+.+. ...+++.|+|+||++. .+++.|++.||...+
T Consensus 237 --~~~----~gk~--~di~-~~~~-~~~~~~~~~v~~i~~~~~----~~~~~~~Iil~GGGa~--ll~~~l~~~f~~~~i 300 (320)
T TIGR03739 237 --PRI----YQKP--VDIK-RCLE-LAETVAQQAVSTMMTWIG----APESIQNIVLVGGGAF--LFKKAVKAAFPKHRI 300 (320)
T ss_pred --eee----ccee--cCch-HHHH-HHHHHHHHHHHHHHHhcc----cCCcccEEEEeCCcHH--HHHHHHHHHCCCCee
Confidence 000 1111 1222 1222 333444444444444332 2346899999999998 678999999977666
Q ss_pred cccCCCchhHHhHHHHHH
Q psy6736 345 NKSINPDEAVAYGAAVQA 362 (1023)
Q Consensus 345 ~~~~~pd~aVa~GAa~~a 362 (1023)
....||..|.|+|-..++
T Consensus 301 ~~~~dp~~ANarG~~~~g 318 (320)
T TIGR03739 301 VEVDEPMFANVRGFQIAG 318 (320)
T ss_pred EecCCcHHHHHHHHHHhh
Confidence 667799999999987765
No 70
>PTZ00280 Actin-related protein 3; Provisional
Probab=98.91 E-value=5.6e-08 Score=112.89 Aligned_cols=232 Identities=18% Similarity=0.095 Sum_probs=141.6
Q ss_pred cccccCHHHHHhHhhhhccCcchHHHHHHHHHhC--CcCCcceEecCCCCCHHHHHHHHHHH-HHcCCceeeeecchHHH
Q psy6736 79 RLKAVSAQELSRGVKAIFTAPDILKKKTSEDILR--KVDGQNEGLIPAYFNISSVKSTKDSG-TIAGLNVLRIINEPTAA 155 (1023)
Q Consensus 79 ~~~~~~~~~v~a~~L~~~~~~~~~l~~~a~~~~~--~~~~~~vitVPa~~~~~qr~~l~~Aa-~~AGl~~~~li~Ep~AA 155 (1023)
..+.+..-+....++ .++... .++ ..-..+++|.|..++..+|+.+.+.+ +..|+.-+.+..+|.+|
T Consensus 74 ~~G~I~dwd~~e~l~-------~~~~~~---~L~~~p~~~~vllte~~~~~~~~Re~l~e~lFE~~~~p~i~~~~~~~ls 143 (414)
T PTZ00280 74 KHGIVEDWDLMEKFW-------EQCIFK---YLRCEPEEHYFILTEPPMNPPENREYTAEIMFETFNVKGLYIAVQAVLA 143 (414)
T ss_pred cCCEeCCHHHHHHHH-------HHHHHH---hhccCCCCCceEEeeCCCCcHHHHHHHHHHHhhccCCCeEEEecCHHHh
Confidence 334555555555555 554432 232 22346899999999999999887665 55599999999999999
Q ss_pred HHHhccccccCccccccCCCCCcEEEEEEeCCceEEEEEEEEeCCEEEEEEecCCCCccHHHHHHHHHHHHHHHHHhhhc
Q psy6736 156 AIAYGLDKKVGSTAVEYNGSGERNVLIFDLGGGTFDVSILTIEDGIFEVKSTAGDTHLGGEDFDNRMVNHFVQEFKRKYK 235 (1023)
Q Consensus 156 al~y~~~~~~~~~~~~~~~~~~~~vlV~D~GggT~dvsv~~~~~~~~~v~~~~~~~~lGG~~~D~~l~~~l~~~~~~~~~ 235 (1023)
++++....... . .....+-+|+|+|+|+|+++.+.- |..-..+ .....+||.++|+.|.++|.++.
T Consensus 144 lya~~~~~~~~----~--~~g~~tglVVDiG~~~T~i~PV~~--G~~l~~~-~~~~~~GG~~lt~~L~~lL~~~~----- 209 (414)
T PTZ00280 144 LRASWTSKKAK----E--LGGTLTGTVIDSGDGVTHVIPVVD--GYVIGSS-IKHIPLAGRDITNFIQQMLRERG----- 209 (414)
T ss_pred Hhhhccccccc----c--cCCceeEEEEECCCCceEEEEEEC--CEEcccc-eEEecCcHHHHHHHHHHHHHHcC-----
Confidence 98763322100 0 001235599999999999987753 3221111 12257999999999999886532
Q ss_pred cCccccHHHHHHHHHHHHHHhHHcCCCCc-----------------eEEEEecccCCceeEEEecHHHHH---HHhHHHH
Q psy6736 236 KDLTTNKRALRRLRTACERAKRTLSSSTQ-----------------ASIEIDSLFEGVDFYTSITRARFE---ELNADLF 295 (1023)
Q Consensus 236 ~~~~~~~~~~~~L~~~ae~~K~~Ls~~~~-----------------~~i~i~~~~~~~~~~~~itr~~~e---~~~~~~~ 295 (1023)
..+... .....++.+|+.+..-.. ..+..+....+....+.|..+.|. -++.|-+
T Consensus 210 ~~~~~~-----~~~~~~~~iKe~~c~v~~d~~~e~~~~~~~~~~~~~~~~~~d~~~g~~~~i~l~~erf~~~E~LF~P~~ 284 (414)
T PTZ00280 210 EPIPAE-----DILLLAQRIKEKYCYVAPDIAKEFEKYDSDPKNHFKKYTAVNSVTKKPYTVDVGYERFLGPEMFFHPEI 284 (414)
T ss_pred CCCCcH-----HHHHHHHHHHHhcCcccCcHHHHHHHhhcCcccccceEECCCCCCCCccEEEechHHhcCcccccChhh
Confidence 111111 112245566665532110 112222222234446777777664 3454532
Q ss_pred ------HHHHHHHHHHHHHcCCC--ccCcCeEEEEcCCCCcHHHHHHHHHHc
Q psy6736 296 ------RGTMEPVEKSLRDAKMD--KAQIHDIVLVGGSTRIPKVQKLLQDFF 339 (1023)
Q Consensus 296 ------~~i~~~i~~~l~~~~~~--~~~i~~V~LvGG~sr~p~v~~~l~~~f 339 (1023)
..+.+.|.+.+.++... ..=.+.|+|+||+|.+|.+.++|++.+
T Consensus 285 ~~~~~~~gl~e~i~~sI~~~~~d~r~~L~~nIvL~GG~s~~~Gf~eRL~~El 336 (414)
T PTZ00280 285 FSSEWTTPLPEVVDDAIQSCPIDCRRPLYKNIVLSGGSTMFKGFDKRLQRDV 336 (414)
T ss_pred cCCccCCCHHHHHHHHHHhCChhhHHHHhhcEEEeCCcccCcCHHHHHHHHH
Confidence 14567777787776533 222366999999999999999998876
No 71
>TIGR01175 pilM type IV pilus assembly protein PilM. This protein is required for the assembly of the type IV fimbria in Pseudomonas aeruginosa responsible for twitching motility, and for a similar pilus-like structure in Synechocystis. It is also found in species such as Deinococcus described as having natural transformation (for which a type IV pilus-like structure is proposed) but not fimbria.
Probab=98.91 E-value=2.1e-08 Score=114.11 Aligned_cols=165 Identities=15% Similarity=0.192 Sum_probs=110.5
Q ss_pred CHHHHHHHHHHHHHcCCceeeeecchHHHHHHhcc-ccccCccccccCCCCCc-EEEEEEeCCceEEEEEEEEeCCEEEE
Q psy6736 127 NISSVKSTKDSGTIAGLNVLRIINEPTAAAIAYGL-DKKVGSTAVEYNGSGER-NVLIFDLGGGTFDVSILTIEDGIFEV 204 (1023)
Q Consensus 127 ~~~qr~~l~~Aa~~AGl~~~~li~Ep~AAal~y~~-~~~~~~~~~~~~~~~~~-~vlV~D~GggT~dvsv~~~~~~~~~v 204 (1023)
.....+.+.++++.||+++..+..+|.|.+-.+.. ..... ...... .++++|+|+++|+++++.-+...+
T Consensus 141 ~~~~v~~~~~~~~~aGl~~~~id~~~~Al~~~~~~~~~~~~------~~~~~~~~~~lvdiG~~~t~l~i~~~g~~~~-- 212 (348)
T TIGR01175 141 RKEVVDSRLHALKLAGLEPKVVDVESFALLRAWRLLGEQLA------SRTYRLTDAALVDIGATSSTLNLLHPGRMLF-- 212 (348)
T ss_pred cHHHHHHHHHHHHHcCCceEEEecHHHHHHHHHHHHHhhCc------cccccCceEEEEEECCCcEEEEEEECCeEEE--
Confidence 34556788999999999999999999998665531 00000 001233 499999999999999996433222
Q ss_pred EEecCCCCccHHHHHHHHHHHHHHHHHhhhccCccccHHHHHHHHHHHHHHhHHcCCCCceEEEEecccCCceeEEEecH
Q psy6736 205 KSTAGDTHLGGEDFDNRMVNHFVQEFKRKYKKDLTTNKRALRRLRTACERAKRTLSSSTQASIEIDSLFEGVDFYTSITR 284 (1023)
Q Consensus 205 ~~~~~~~~lGG~~~D~~l~~~l~~~~~~~~~~~~~~~~~~~~~L~~~ae~~K~~Ls~~~~~~i~i~~~~~~~~~~~~itr 284 (1023)
.....+||.++++.+.+.+.-. ...||+.|..-+....
T Consensus 213 ---~r~i~~G~~~i~~~i~~~~~~~-------------------~~~Ae~~k~~~~~~~~-------------------- 250 (348)
T TIGR01175 213 ---TREVPFGTRQLTSELSRAYGLN-------------------PEEAGEAKQQGGLPLL-------------------- 250 (348)
T ss_pred ---EEEeechHHHHHHHHHHHcCCC-------------------HHHHHHHHhcCCCCCc--------------------
Confidence 3346799999999987543221 1367777765322110
Q ss_pred HHHHHHhHHHHHHHHHHHHHHHHHc--CCCccCcCeEEEEcCCCCcHHHHHHHHHHcCCcc
Q psy6736 285 ARFEELNADLFRGTMEPVEKSLRDA--KMDKAQIHDIVLVGGSTRIPKVQKLLQDFFNGKE 343 (1023)
Q Consensus 285 ~~~e~~~~~~~~~i~~~i~~~l~~~--~~~~~~i~~V~LvGG~sr~p~v~~~l~~~f~~~~ 343 (1023)
.-.+++++.++++...|.+.++-. ......++.|+|+||+++++.+.+.+++.| +.+
T Consensus 251 -~~~~~~~~~~~~l~~eI~~~l~~~~~~~~~~~i~~I~LtGgga~~~gl~~~l~~~l-~~~ 309 (348)
T TIGR01175 251 -YDPEVLRRFKGELVDEIRRSLQFFTAQSGTNSLDGLVLAGGGATLSGLDAAIYQRL-GLP 309 (348)
T ss_pred -hhHHHHHHHHHHHHHHHHHHHHhhcCCCCCcccceEEEECccccchhHHHHHHHHH-CCC
Confidence 012345566666666677766532 222345899999999999999999999999 443
No 72
>PF00022 Actin: Actin; InterPro: IPR004000 Actin [, ] is a ubiquitous protein involved in the formation of filaments that are major components of the cytoskeleton. These filaments interact with myosin to produce a sliding effect, which is the basis of muscular contraction and many aspects of cell motility, including cytokinesis. Each actin protomer binds one molecule of ATP and has one high affinity site for either calcium or magnesium ions, as well as several low affinity sites. Actin exists as a monomer in low salt concentrations, but filaments form rapidly as salt concentration rises, with the consequent hydrolysis of ATP. Actin from many sources forms a tight complex with deoxyribonuclease (DNase I) although the significance of this is still unknown. The formation of this complex results in the inhibition of DNase I activity, and actin loses its ability to polymerise. It has been shown that an ATPase domain of actin shares similarity with ATPase domains of hexokinase and hsp70 proteins [, ]. In vertebrates there are three groups of actin isoforms: alpha, beta and gamma. The alpha actins are found in muscle tissues and are a major constituent of the contractile apparatus. The beta and gamma actins co-exists in most cell types as components of the cytoskeleton and as mediators of internal cell motility. In plants there are many isoforms which are probably involved in a variety of functions such as cytoplasmic streaming, cell shape determination, tip growth, graviperception, cell wall deposition, etc. Recently some divergent actin-like proteins have been identified in several species. These proteins include centractin (actin-RPV) from mammals, fungi yeast ACT5, Neurospora crassa ro-4) and Pneumocystis carinii, which seems to be a component of a multi-subunit centrosomal complex involved in microtubule based vesicle motility (this subfamily is known as ARP1); ARP2 subfamily, which includes chicken ACTL, Saccharomyces cerevisiae ACT2, Drosophila melanogaster 14D and Caenorhabditis elegans actC; ARP3 subfamily, which includes actin 2 from mammals, Drosophila 66B, yeast ACT4 and Schizosaccharomyces pombe act2; and ARP4 subfamily, which includes yeast ACT3 and Drosophila 13E.; PDB: 2OAN_B 1HLU_A 2BTF_A 3UB5_A 3U4L_A 4EFH_A 1YVN_A 1YAG_A 1D4X_A 1MDU_B ....
Probab=98.86 E-value=2.1e-08 Score=116.30 Aligned_cols=226 Identities=20% Similarity=0.226 Sum_probs=132.5
Q ss_pred CCcceEecCCCCCHHHHHHHHHHH-HHcCCceeeeecchHHHHHHhccccccCccccccCCCCCcEEEEEEeCCceEEEE
Q psy6736 115 DGQNEGLIPAYFNISSVKSTKDSG-TIAGLNVLRIINEPTAAAIAYGLDKKVGSTAVEYNGSGERNVLIFDLGGGTFDVS 193 (1023)
Q Consensus 115 ~~~~vitVPa~~~~~qr~~l~~Aa-~~AGl~~~~li~Ep~AAal~y~~~~~~~~~~~~~~~~~~~~vlV~D~GggT~dvs 193 (1023)
-..++++.|..++..+|+.+.+.+ +..|+.-+.++++|.+|+++++.. +-+|+|+|.+.|.++
T Consensus 94 ~~~vll~~~~~~~~~~r~~l~e~lfE~~~~~~v~~~~~~~~a~~~~g~~----------------tglVVD~G~~~t~v~ 157 (393)
T PF00022_consen 94 DHPVLLTEPPFNPRSQREKLAEILFEKFGVPSVYFIPSPLLALYASGRT----------------TGLVVDIGYSSTSVV 157 (393)
T ss_dssp GSEEEEEESTT--HHHHHHHHHHHHHTS--SEEEEEEHHHHHHHHTTBS----------------SEEEEEESSS-EEEE
T ss_pred cceeeeeccccCCchhhhhhhhhhhcccccceeeeeecccccccccccc----------------cccccccceeeeeee
Confidence 456899999999999998776554 577999999999999999888643 349999999999887
Q ss_pred EEEEeCCEEEEEEecCCCCccHHHHHHHHHHHHHHHHHh---hhccC---cc-ccHHHHHHHHHHHHHHhHHc-------
Q psy6736 194 ILTIEDGIFEVKSTAGDTHLGGEDFDNRMVNHFVQEFKR---KYKKD---LT-TNKRALRRLRTACERAKRTL------- 259 (1023)
Q Consensus 194 v~~~~~~~~~v~~~~~~~~lGG~~~D~~l~~~l~~~~~~---~~~~~---~~-~~~~~~~~L~~~ae~~K~~L------- 259 (1023)
.+- ++.. +........+||.++++.|.+.|..+--. .+... .. ...-....-...++.+|+.+
T Consensus 158 pV~--dG~~-~~~~~~~~~~GG~~lt~~l~~lL~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ik~~~~~v~~~~ 234 (393)
T PF00022_consen 158 PVV--DGYV-LPHSIKRSPIGGDDLTEYLKELLKERNIQINPSYLIKSKSPVEGESYNNSDDEEIVEEIKEECCYVSEDP 234 (393)
T ss_dssp EEE--TTEE--GGGBEEES-SHHHHHHHHHHHHHHT-SS--GCCCCCCHCCC-TCHHSSHHHHHHHHHHHHHHHSGGSSH
T ss_pred eee--eccc-cccccccccccHHHHHHHHHHHHHhhccccccccccccccccccccccchhhhccchhccchhhhccccc
Confidence 763 3322 11111225799999999998888874110 00000 00 00000001111222333222
Q ss_pred --------CCCCceEEEEecccCCceeEEEecHHHHH---HHhHHHH------------HHHHHHHHHHHHHcCCCc--c
Q psy6736 260 --------SSSTQASIEIDSLFEGVDFYTSITRARFE---ELNADLF------------RGTMEPVEKSLRDAKMDK--A 314 (1023)
Q Consensus 260 --------s~~~~~~i~i~~~~~~~~~~~~itr~~~e---~~~~~~~------------~~i~~~i~~~l~~~~~~~--~ 314 (1023)
.........+ .++. .+.+..+.|. -++.|.. ..+.+.|.+++..+.... .
T Consensus 235 ~~~~~~~~~~~~~~~~~l---Pdg~--~i~~~~er~~~~E~LF~p~~~~~~~~~~~~~~~gL~~~I~~si~~~~~d~r~~ 309 (393)
T PF00022_consen 235 DEEQEEQASENPEKSYEL---PDGQ--TIILGKERFRIPEILFNPSLIGIDSASEPSEFMGLPELILDSISKCPIDLRKE 309 (393)
T ss_dssp HHHHHHHHCSTTTEEEE----TTSS--EEEESTHHHHHHHTTTSGGGGTSSSTS---SSSCHHHHHHHHHHTSTTTTHHH
T ss_pred ccccccccccccceeccc---cccc--ccccccccccccccccccccccccccccccccchhhhhhhhhhhccccccccc
Confidence 1122223322 2343 4555554442 2333322 156778888887765432 1
Q ss_pred CcCeEEEEcCCCCcHHHHHHHHHHcCC-------ccccccC-CCchhHHhHHHHHHHH
Q psy6736 315 QIHDIVLVGGSTRIPKVQKLLQDFFNG-------KELNKSI-NPDEAVAYGAAVQAAI 364 (1023)
Q Consensus 315 ~i~~V~LvGG~sr~p~v~~~l~~~f~~-------~~i~~~~-~pd~aVa~GAa~~a~~ 364 (1023)
=...|+|+||+|++|.+.++|.+.+.. .++.... +|..++=.||+++|..
T Consensus 310 l~~nIvl~GG~S~i~G~~eRL~~eL~~~~~~~~~~~v~~~~~~~~~~aW~Ggsilasl 367 (393)
T PF00022_consen 310 LLSNIVLTGGSSLIPGFKERLQQELRSLLPSSTKVKVIAPPSDRQFAAWIGGSILASL 367 (393)
T ss_dssp HHTTEEEESGGGGSTTHHHHHHHHHHHHSGTTSTEEEE--T-TTTSHHHHHHHHHHTS
T ss_pred cccceEEecccccccchHHHHHHHhhhhhhccccceeccCchhhhhcccccceeeecc
Confidence 236799999999999999999877622 2334444 7899999999998853
No 73
>PF11104 PilM_2: Type IV pilus assembly protein PilM;; PDB: 2YCH_A.
Probab=98.77 E-value=3.8e-08 Score=111.21 Aligned_cols=183 Identities=21% Similarity=0.294 Sum_probs=110.8
Q ss_pred HHHHHHHHHHHHcCCceeeeecchHHHHHHhccccccCccccccCCCCCcEEEEEEeCCceEEEEEEEEeCCEEEEEEec
Q psy6736 129 SSVKSTKDSGTIAGLNVLRIINEPTAAAIAYGLDKKVGSTAVEYNGSGERNVLIFDLGGGTFDVSILTIEDGIFEVKSTA 208 (1023)
Q Consensus 129 ~qr~~l~~Aa~~AGl~~~~li~Ep~AAal~y~~~~~~~~~~~~~~~~~~~~vlV~D~GggT~dvsv~~~~~~~~~v~~~~ 208 (1023)
..-+...++++.|||++..+=-+|.|.+-.|.......+ .......++++|+|+.++.++++.-+...+ .
T Consensus 136 ~~v~~~~~~~~~aGL~~~~vDv~~~Al~r~~~~~~~~~~-----~~~~~~~~~lvdiG~~~t~~~i~~~g~~~f-----~ 205 (340)
T PF11104_consen 136 EIVESYVELFEEAGLKPVAVDVEAFALARLFEFLEPQLP-----DEEDAETVALVDIGASSTTVIIFQNGKPIF-----S 205 (340)
T ss_dssp HHHHHHHHHHHHTT-EEEEEEEHHHHGGGGGHHHHHTST---------T-EEEEEEE-SS-EEEEEEETTEEEE-----E
T ss_pred HHHHHHHHHHHHcCCceEEEeehHHHHHHHHHHHHHhCC-----cccccceEEEEEecCCeEEEEEEECCEEEE-----E
Confidence 344678899999999998776666665444433211000 001346799999999999999986432222 3
Q ss_pred CCCCccHHHHHHHHHHHHHHHHHhhhccCccccHHHHHHHHHHHHHHhHHcCCCCceEEEEecccCCceeEEEecHHHHH
Q psy6736 209 GDTHLGGEDFDNRMVNHFVQEFKRKYKKDLTTNKRALRRLRTACERAKRTLSSSTQASIEIDSLFEGVDFYTSITRARFE 288 (1023)
Q Consensus 209 ~~~~lGG~~~D~~l~~~l~~~~~~~~~~~~~~~~~~~~~L~~~ae~~K~~Ls~~~~~~i~i~~~~~~~~~~~~itr~~~e 288 (1023)
+...+||.++++.|++.+.-.+. +||..|..-+... +...
T Consensus 206 R~i~~G~~~l~~~i~~~~~i~~~-------------------~Ae~~k~~~~l~~---------------------~~~~ 245 (340)
T PF11104_consen 206 RSIPIGGNDLTEAIARELGIDFE-------------------EAEELKRSGGLPE---------------------EYDQ 245 (340)
T ss_dssp EEES-SHHHHHHHHHHHTT--HH-------------------HHHHHHHHT---------------------------HH
T ss_pred EEEeeCHHHHHHHHHHhcCCCHH-------------------HHHHHHhcCCCCc---------------------chHH
Confidence 34679999999999977654443 5666666521100 2334
Q ss_pred HHhHHHHHHHHHHHHHHHH--HcCCCccCcCeEEEEcCCCCcHHHHHHHHHHcCCcccc---------ccC---------
Q psy6736 289 ELNADLFRGTMEPVEKSLR--DAKMDKAQIHDIVLVGGSTRIPKVQKLLQDFFNGKELN---------KSI--------- 348 (1023)
Q Consensus 289 ~~~~~~~~~i~~~i~~~l~--~~~~~~~~i~~V~LvGG~sr~p~v~~~l~~~f~~~~i~---------~~~--------- 348 (1023)
+.+.+.++++..-|.+.++ ........|+.|+|+||++++|.+.+.|++.+ +.++. ...
T Consensus 246 ~~l~~~~~~l~~EI~rsl~~y~~~~~~~~i~~I~L~Ggga~l~gL~~~l~~~l-~~~v~~~~p~~~~~~~~~~~~~~~~~ 324 (340)
T PF11104_consen 246 DALRPFLEELAREIRRSLDFYQSQSGGESIERIYLSGGGARLPGLAEYLSEEL-GIPVEVINPFKNIKLDPKINSEYLQE 324 (340)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHH------SEEEEESGGGGSTTHHHHHHHHH-TSEEEE--GGGGSB--TTS-HHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCEEEEECCccchhhHHHHHHHHH-CCceEEcChHHhCccCcccChhhhhh
Confidence 5566666777777777766 22334557999999999999999999999998 44321 111
Q ss_pred -CCchhHHhHHHHHH
Q psy6736 349 -NPDEAVAYGAAVQA 362 (1023)
Q Consensus 349 -~pd~aVa~GAa~~a 362 (1023)
.|..++|.|.|+..
T Consensus 325 ~~~~~avA~GLAlR~ 339 (340)
T PF11104_consen 325 DAPQFAVALGLALRG 339 (340)
T ss_dssp HHHHHHHHHHHHHHH
T ss_pred hhhHHHHHHHHhhcC
Confidence 25678999998864
No 74
>PF06406 StbA: StbA protein; InterPro: IPR009440 This entry represents bacterial plasmid segregation proteins ParM and StbA []. They are involved in the control of plasmid partition and required for the accurate segregation of the plasmid. ; PDB: 3IKY_C 3IKU_I 2ZGZ_B 1MWM_A 1MWK_A 2ZHC_A 2ZGY_A 2QU4_A.
Probab=98.71 E-value=1.1e-07 Score=106.18 Aligned_cols=174 Identities=17% Similarity=0.266 Sum_probs=98.8
Q ss_pred ceeeeecchHHHHHHhccccccCccccccCCCCCcEEEEEEeCCceEEEEEEEEeCCEEEEEEecCCCCccHHHHHHHHH
Q psy6736 144 NVLRIINEPTAAAIAYGLDKKVGSTAVEYNGSGERNVLIFDLGGGTFDVSILTIEDGIFEVKSTAGDTHLGGEDFDNRMV 223 (1023)
Q Consensus 144 ~~~~li~Ep~AAal~y~~~~~~~~~~~~~~~~~~~~vlV~D~GggT~dvsv~~~~~~~~~v~~~~~~~~lGG~~~D~~l~ 223 (1023)
..+.+++|+.||.+.+..... +...++|+|+||+|+|++++.- +.-.+....+...+|-..+-..+.
T Consensus 141 ~~V~V~PQ~~~A~~~~~~~~~-----------~~~~~lVVDIGG~T~Dv~~v~~--~~~~~~~~~~~~~~Gvs~~~~~I~ 207 (318)
T PF06406_consen 141 KDVEVFPQSVGAVFDALMDLD-----------EDESVLVVDIGGRTTDVAVVRG--GLPDISKCSGTPEIGVSDLYDAIA 207 (318)
T ss_dssp EEEEEEESSHHHHHHHHHTS------------TTSEEEEEEE-SS-EEEEEEEG--GG--EEEEEEETTSSTHHHHHHHH
T ss_pred eeEEEEcccHHHHHHHHHhhc-----------ccCcEEEEEcCCCeEEeeeecC--CccccchhccCCchhHHHHHHHHH
Confidence 467899999999988765522 3467999999999999998862 211222334456789998888888
Q ss_pred HHHHHHHHhhhccCccccHHHHHHHHHHHHHHhHHcCCCCceEEEEecccCCceeEEEecHHHHHHHhHHHHHHHHHHHH
Q psy6736 224 NHFVQEFKRKYKKDLTTNKRALRRLRTACERAKRTLSSSTQASIEIDSLFEGVDFYTSITRARFEELNADLFRGTMEPVE 303 (1023)
Q Consensus 224 ~~l~~~~~~~~~~~~~~~~~~~~~L~~~ae~~K~~Ls~~~~~~i~i~~~~~~~~~~~~itr~~~e~~~~~~~~~i~~~i~ 303 (1023)
+.+.. .. ... +......+..... -+..++. ..... =..+++.++++..++++.+.|.
T Consensus 208 ~~l~~-~~----~~~--s~~~~~~ii~~~~-~~~~~~~----------~i~~~-----~~~~~v~~~i~~~~~~l~~~i~ 264 (318)
T PF06406_consen 208 QALRS-AG----IDT--SELQIDDIIRNRK-DKGYLRQ----------VINDE-----DVIDDVSEVIEEAVEELINRIL 264 (318)
T ss_dssp HHTT---S----BHH--HHHHHHHHHHTTT--HHHHHH----------HSSSH-----HHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHH-hc----CCC--cHHHHHHHHHhhh-ccceecc----------cccch-----hhHHHHHHHHHHHHHHHHHHHH
Confidence 77665 11 000 0001111111000 0000000 00000 0123444555555555555555
Q ss_pred HHHHHcCCCccCcCeEEEEcCCCCcHHHHHHHHHHcC--CccccccCCCchhHHhHHH
Q psy6736 304 KSLRDAKMDKAQIHDIVLVGGSTRIPKVQKLLQDFFN--GKELNKSINPDEAVAYGAA 359 (1023)
Q Consensus 304 ~~l~~~~~~~~~i~~V~LvGG~sr~p~v~~~l~~~f~--~~~i~~~~~pd~aVa~GAa 359 (1023)
+.+. ...+++.|+||||++. .+.+.|++.|+ ...+...-||..|-|+|-+
T Consensus 265 ~~~~----~~~~~~~I~~vGGGA~--ll~~~Ik~~~~~~~~~i~i~~~pqfAnv~G~~ 316 (318)
T PF06406_consen 265 RELG----DFSDIDRIFFVGGGAI--LLKDAIKEAFPVPNERIVIVDDPQFANVRGFY 316 (318)
T ss_dssp HHHT----TS-S-SEEEEESTTHH--HHHHHHHHHHT--GGGEE--SSGGGHHHHHHH
T ss_pred HHHh----hhccCCeEEEECCcHH--HHHHHHHHhhCCCCCcEEECCCchhhHHHHHh
Confidence 5543 2356799999999986 77899999985 3467778899999999964
No 75
>PRK13917 plasmid segregation protein ParM; Provisional
Probab=98.68 E-value=1.7e-07 Score=105.47 Aligned_cols=157 Identities=16% Similarity=0.199 Sum_probs=107.9
Q ss_pred CcceEEEEEeCCceEEEEEEEEeCCEEEEEEecCCCCCcHHHHHHHHHHHHHHHHHhhhccCcchhHHHHHHHHHHHHHH
Q psy6736 633 GERNVLIFDLGGGTFDVSILTIEDGIFEVKSTAGDTHLGGEDFDNRMVNHFVQEFKRKYKKDLTTNKRALRRLRTACERA 712 (1023)
Q Consensus 633 ~~~~vlV~D~GggT~dvsi~~~~~~~~~v~~~~gd~~lGG~~~D~~l~~~~~~~~~~~~~~~~~~~~~~~~~L~~~~e~~ 712 (1023)
++.+++|+|+|+||+|++++. ++.+.. ..++....|..++.+.|.+++.++. ++..+. .. ++....+
T Consensus 183 ~~~~ilvIDIG~~TtD~~v~~--~~~~~~-~~s~s~~~G~~~~~~~I~~~i~~~~---~~~~~~--~~---~ie~~l~-- 249 (344)
T PRK13917 183 EEGKVSVIDFGSGTTDLDTIQ--NLKRVE-EESFVIPKGTIDVYKRIASHISKKE---EGASIT--PY---MLEKGLE-- 249 (344)
T ss_pred ccCcEEEEEcCCCcEEEEEEe--CcEEcc-cccccccchHHHHHHHHHHHHHhhC---CCCCCC--HH---HHHHHHH--
Confidence 446799999999999999986 444433 3334467899999999988875432 222221 11 1212211
Q ss_pred hhhcCCCceeEEEEecccCCcceEEEecHHHHHHHHHHHHHHHHHHHHHHHHHcCCCccccceEEEecCccCcHHHHHHH
Q psy6736 713 KRTLSSSTQASIEIDSLFEGVDFYTSITRARFEELNADLFRGTMEPVEKSLRDAKMDKAQIHDIVLVGGSTRIPKVQKLL 792 (1023)
Q Consensus 713 K~~Ls~~~~~~~~i~~~~~~~~~~~~itr~~~~~~~~~~~~~~~~~i~~~l~~~~~~~~~i~~V~LvGG~srip~v~~~l 792 (1023)
.. .+.+ ..+.. +.+ ++++.++++.+++++.+.+...+.. ..+++.|+|+||++++ +++.|
T Consensus 250 -----~g---~i~~---~~~~~--id~-~~~~~~~~~~~~~~i~~~i~~~~~~----~~~~d~IiL~GGGA~l--l~~~l 309 (344)
T PRK13917 250 -----YG---ACKL---NQKTV--IDF-KDEFYKEQDSVIDEVMSGFEIAVGN----INSFDRVIVTGGGANI--FFDSL 309 (344)
T ss_pred -----cC---cEEe---CCCce--Eeh-HHHHHHHHHHHHHHHHHHHHHHhcc----cCCCCEEEEECCcHHH--HHHHH
Confidence 11 1111 11111 222 4667889999999999988888753 3578999999999987 88999
Q ss_pred HHhhcCcccCCCCCCccceecchHHHHHHHhC
Q psy6736 793 QDFFNGKELNKSINPDEAVAYGAAVQAAILHG 824 (1023)
Q Consensus 793 ~~~f~~~~~~~~~~p~~aVa~GAa~~a~~l~~ 824 (1023)
++.|+.. ....||..|-|+|...+|..+.+
T Consensus 310 k~~f~~~--~~~~~p~~ANa~G~~~~g~~~~~ 339 (344)
T PRK13917 310 SHWYSDV--EKADESQFANVRGYYKYGELLKN 339 (344)
T ss_pred HHHcCCe--EEcCChHHHHHHHHHHHHHHHhc
Confidence 9999643 56689999999999999986643
No 76
>PTZ00281 actin; Provisional
Probab=98.67 E-value=4.3e-07 Score=103.97 Aligned_cols=218 Identities=17% Similarity=0.182 Sum_probs=136.1
Q ss_pred CCcceEecCCCCCHHHHHHHHH-HHHHcCCceeeeecchHHHHHHhccccccCccccccCCCCCcEEEEEEeCCceEEEE
Q psy6736 115 DGQNEGLIPAYFNISSVKSTKD-SGTIAGLNVLRIINEPTAAAIAYGLDKKVGSTAVEYNGSGERNVLIFDLGGGTFDVS 193 (1023)
Q Consensus 115 ~~~~vitVPa~~~~~qr~~l~~-Aa~~AGl~~~~li~Ep~AAal~y~~~~~~~~~~~~~~~~~~~~vlV~D~GggT~dvs 193 (1023)
-..+++|-|..+...+|+.|.+ ..+..++.-+.+...|.+++++++. .+-+|+|+|.+.|.++
T Consensus 101 ~~pvllte~~~~~~~~re~l~e~lFE~~~vp~~~~~~~~~ls~ya~g~----------------~tglVVDiG~~~t~v~ 164 (376)
T PTZ00281 101 EHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGR----------------TTGIVMDSGDGVSHTV 164 (376)
T ss_pred cCeEEEecCCCCcHHHHHHHHHHHhcccCCceeEeeccHHHHHHhcCC----------------ceEEEEECCCceEEEE
Confidence 3568899999999999988876 5577799999999999999887642 2469999999999987
Q ss_pred EEEEeCCEEEEEEecCCCCccHHHHHHHHHHHHHHHHHhhhccCccccHHHHHHHHHHHHHHhHHcCCCCc---------
Q psy6736 194 ILTIEDGIFEVKSTAGDTHLGGEDFDNRMVNHFVQEFKRKYKKDLTTNKRALRRLRTACERAKRTLSSSTQ--------- 264 (1023)
Q Consensus 194 v~~~~~~~~~v~~~~~~~~lGG~~~D~~l~~~l~~~~~~~~~~~~~~~~~~~~~L~~~ae~~K~~Ls~~~~--------- 264 (1023)
-+.-+-. +........+||.++++.|.+.|...- ..... . .- ...++.+|+.+..-..
T Consensus 165 PV~dG~~---~~~~~~~~~~GG~~lt~~L~~lL~~~~-----~~~~~-~-~~---~~~~~~iKe~~c~v~~d~~~~~~~~ 231 (376)
T PTZ00281 165 PIYEGYA---LPHAILRLDLAGRDLTDYMMKILTERG-----YSFTT-T-AE---REIVRDIKEKLAYVALDFEAEMQTA 231 (376)
T ss_pred EEEeccc---chhheeeccCcHHHHHHHHHHHHHhcC-----CCCCc-H-HH---HHHHHHHHHhcEEecCCchHHHHhh
Confidence 6543221 111222357999999999988775421 11110 0 00 1234555555432110
Q ss_pred ---eEEEEe-cccCCceeEEEecHHHH---HHHhHHHH-----HHHHHHHHHHHHHcCCC--ccCcCeEEEEcCCCCcHH
Q psy6736 265 ---ASIEID-SLFEGVDFYTSITRARF---EELNADLF-----RGTMEPVEKSLRDAKMD--KAQIHDIVLVGGSTRIPK 330 (1023)
Q Consensus 265 ---~~i~i~-~~~~~~~~~~~itr~~~---e~~~~~~~-----~~i~~~i~~~l~~~~~~--~~~i~~V~LvGG~sr~p~ 330 (1023)
...... .+.+|. .+++..+.| |-+++|.+ ..+.+.|.+++..+... +.=.+.|+|+||+|.+|.
T Consensus 232 ~~~~~~~~~y~LPdg~--~i~i~~er~~~~E~LF~P~~~~~~~~gi~~~i~~sI~~~~~d~r~~L~~nIvl~GG~s~~~G 309 (376)
T PTZ00281 232 ASSSALEKSYELPDGQ--VITIGNERFRCPEALFQPSFLGMESAGIHETTYNSIMKCDVDIRKDLYGNVVLSGGTTMFPG 309 (376)
T ss_pred hcCcccceeEECCCCC--EEEeeHHHeeCcccccChhhcCCCCCCHHHHHHHHHHhCChhHHHHHHhhccccCccccCcC
Confidence 001111 122333 345555444 23444432 24566777777765432 122367999999999999
Q ss_pred HHHHHHHHc----CC---ccccccCCCchhHHhHHHHHHH
Q psy6736 331 VQKLLQDFF----NG---KELNKSINPDEAVAYGAAVQAA 363 (1023)
Q Consensus 331 v~~~l~~~f----~~---~~i~~~~~pd~aVa~GAa~~a~ 363 (1023)
+.++|+..+ +. .++..+.++..++=.||+++|.
T Consensus 310 f~~RL~~El~~~~p~~~~v~v~~~~~r~~~aW~Ggsilas 349 (376)
T PTZ00281 310 IADRMNKELTALAPSTMKIKIIAPPERKYSVWIGGSILAS 349 (376)
T ss_pred HHHHHHHHHHHhCCCCcceEEecCCCCceeEEECcccccC
Confidence 999988765 21 1234445667888889988875
No 77
>PTZ00004 actin-2; Provisional
Probab=98.63 E-value=7.9e-07 Score=101.98 Aligned_cols=217 Identities=15% Similarity=0.133 Sum_probs=135.5
Q ss_pred CCcceEecCCCCCHHHHHHHHHH-HHHcCCceeeeecchHHHHHHhccccccCccccccCCCCCcEEEEEEeCCceEEEE
Q psy6736 115 DGQNEGLIPAYFNISSVKSTKDS-GTIAGLNVLRIINEPTAAAIAYGLDKKVGSTAVEYNGSGERNVLIFDLGGGTFDVS 193 (1023)
Q Consensus 115 ~~~~vitVPa~~~~~qr~~l~~A-a~~AGl~~~~li~Ep~AAal~y~~~~~~~~~~~~~~~~~~~~vlV~D~GggT~dvs 193 (1023)
-..+++|-|..++..+|+.+.+. .+..|+..+.++.+|.+|+++++. .+-+|+|+|.+.|+++
T Consensus 101 ~~pvllte~~~~~~~~r~~~~e~lFE~~~~~~~~~~~~~~ls~ya~g~----------------~tglVVDiG~~~t~v~ 164 (378)
T PTZ00004 101 EHPVLLTEAPLNPKANREKMTQIMFETHNVPAMYVAIQAVLSLYASGR----------------TTGIVLDSGDGVSHTV 164 (378)
T ss_pred cCcceeecCCCCcHHHHHHHHHHHHhhcCCceEEeeccHHHHHHhcCC----------------ceEEEEECCCCcEEEE
Confidence 45688999999999999876555 467799999999999999887642 2459999999999987
Q ss_pred EEEEeCCEEEEEEecCCCCccHHHHHHHHHHHHHHHHHhhhccCccccHHHHHHHHHHHHHHhHHcCCCC----------
Q psy6736 194 ILTIEDGIFEVKSTAGDTHLGGEDFDNRMVNHFVQEFKRKYKKDLTTNKRALRRLRTACERAKRTLSSST---------- 263 (1023)
Q Consensus 194 v~~~~~~~~~v~~~~~~~~lGG~~~D~~l~~~l~~~~~~~~~~~~~~~~~~~~~L~~~ae~~K~~Ls~~~---------- 263 (1023)
.+.- |..-..+ .....+||.++++.|.+.+.... ..+... .. ...++.+|+.+..-.
T Consensus 165 pV~d--G~~l~~~-~~~~~~GG~~lt~~L~~lL~~~~-----~~~~~~--~~---~~~~~~iKe~~c~v~~d~~~~~~~~ 231 (378)
T PTZ00004 165 PIYE--GYSLPHA-IHRLDVAGRDLTEYMMKILHERG-----TTFTTT--AE---KEIVRDIKEKLCYIALDFDEEMGNS 231 (378)
T ss_pred EEEC--CEEeecc-eeeecccHHHHHHHHHHHHHhcC-----CCCCcH--HH---HHHHHHHhhcceeecCCHHHHHhhh
Confidence 7652 3222112 22357999999999999875431 111111 00 112344444432110
Q ss_pred ----c-eEEEEecccCCceeEEEecHHHHH---HHhHHH------HHHHHHHHHHHHHHcCCC--ccCcCeEEEEcCCCC
Q psy6736 264 ----Q-ASIEIDSLFEGVDFYTSITRARFE---ELNADL------FRGTMEPVEKSLRDAKMD--KAQIHDIVLVGGSTR 327 (1023)
Q Consensus 264 ----~-~~i~i~~~~~~~~~~~~itr~~~e---~~~~~~------~~~i~~~i~~~l~~~~~~--~~~i~~V~LvGG~sr 327 (1023)
. ..... .+.+|. .+.+..+.|. -++.|- ...+.+.|.+++.++... +.=...|+|+||+|.
T Consensus 232 ~~~~~~~~~~y-~lPdg~--~i~l~~er~~~~E~LF~P~~~~~~~~~gi~~~i~~sI~~~~~d~r~~L~~nIvl~GG~s~ 308 (378)
T PTZ00004 232 AGSSDKYEESY-ELPDGT--IITVGSERFRCPEALFQPSLIGKEEPPGIHELTFQSINKCDIDIRKDLYGNIVLSGGTTM 308 (378)
T ss_pred hcCccccceEE-ECCCCC--EEEEcHHHeeCcccccChhhcCccccCChHHHHHHHHHhCChhHHHHHHhhEEeccchhc
Confidence 0 01111 122343 2445555542 345553 235567777777766432 222367999999999
Q ss_pred cHHHHHHHHHHc----CC---ccccccCCCchhHHhHHHHHHH
Q psy6736 328 IPKVQKLLQDFF----NG---KELNKSINPDEAVAYGAAVQAA 363 (1023)
Q Consensus 328 ~p~v~~~l~~~f----~~---~~i~~~~~pd~aVa~GAa~~a~ 363 (1023)
+|.+.++|+..+ +. .++..+.++..++=.||+++|.
T Consensus 309 ~~Gf~~RL~~EL~~~~p~~~~~~v~~~~~~~~~aW~Ggsilas 351 (378)
T PTZ00004 309 YRGLPERLTKELTTLAPSTMKIKVVAPPERKYSVWIGGSILSS 351 (378)
T ss_pred CcCHHHHHHHHHHHhCCCCccEEEecCCCCceeEEECcccccC
Confidence 999999988765 21 1233445677777888888774
No 78
>PTZ00452 actin; Provisional
Probab=98.61 E-value=2.8e-06 Score=97.01 Aligned_cols=217 Identities=17% Similarity=0.160 Sum_probs=134.4
Q ss_pred CCcceEecCCCCCHHHHHHHHHHH-HHcCCceeeeecchHHHHHHhccccccCccccccCCCCCcEEEEEEeCCceEEEE
Q psy6736 115 DGQNEGLIPAYFNISSVKSTKDSG-TIAGLNVLRIINEPTAAAIAYGLDKKVGSTAVEYNGSGERNVLIFDLGGGTFDVS 193 (1023)
Q Consensus 115 ~~~~vitVPa~~~~~qr~~l~~Aa-~~AGl~~~~li~Ep~AAal~y~~~~~~~~~~~~~~~~~~~~vlV~D~GggT~dvs 193 (1023)
-..+++|-|..++..+|+.|.+.+ +..+...+.+.+.|.+++++++. .+-+|+|+|.|.++++
T Consensus 100 ~~pvlitE~~~~~~~~Re~l~eilFE~~~vp~~~~~~~~~lslya~g~----------------~tglVVDiG~~~t~v~ 163 (375)
T PTZ00452 100 DQPVFMTDAPMNSKFNRERMTQIMFETFNTPCLYISNEAVLSLYTSGK----------------TIGLVVDSGEGVTHCV 163 (375)
T ss_pred cCceeeecCCCCCHHHHHHHHHHHhhccCCceEEEechHHHHHHHCCC----------------ceeeeecCCCCcceEE
Confidence 457899999999999998886654 56688899999999999887643 2459999999999987
Q ss_pred EEEEeCCEEEEEEecCCCCccHHHHHHHHHHHHHHHHHhhhccCccccHHHHHHHHHHHHHHhHHcCCCC----------
Q psy6736 194 ILTIEDGIFEVKSTAGDTHLGGEDFDNRMVNHFVQEFKRKYKKDLTTNKRALRRLRTACERAKRTLSSST---------- 263 (1023)
Q Consensus 194 v~~~~~~~~~v~~~~~~~~lGG~~~D~~l~~~l~~~~~~~~~~~~~~~~~~~~~L~~~ae~~K~~Ls~~~---------- 263 (1023)
-+. +|..--.+. ....+||.++++.|.+.|... +....... . ...++.+|+.+..-.
T Consensus 164 PV~--dG~~l~~~~-~r~~~gG~~lt~~L~~lL~~~-----~~~~~~~~-~----~~~~~~iKe~~c~v~~d~~~e~~~~ 230 (375)
T PTZ00452 164 PVF--EGHQIPQAI-TKINLAGRLCTDYLTQILQEL-----GYSLTEPH-Q----RIIVKNIKERLCYTALDPQDEKRIY 230 (375)
T ss_pred EEE--CCEEeccce-EEeeccchHHHHHHHHHHHhc-----CCCCCCHH-H----HHHHHHHHHHhccccCcHHHHHHHh
Confidence 765 332211121 225699999999998877532 11111110 0 112344444433211
Q ss_pred ----ceEEEEecccCCceeEEEecHHHH---HHHhHHHH-----HHHHHHHHHHHHHcCCC--ccCcCeEEEEcCCCCcH
Q psy6736 264 ----QASIEIDSLFEGVDFYTSITRARF---EELNADLF-----RGTMEPVEKSLRDAKMD--KAQIHDIVLVGGSTRIP 329 (1023)
Q Consensus 264 ----~~~i~i~~~~~~~~~~~~itr~~~---e~~~~~~~-----~~i~~~i~~~l~~~~~~--~~~i~~V~LvGG~sr~p 329 (1023)
...... .+.+|. .+.+..+.| |-+++|.+ ..+.+.|.+.+..+... ..=...|+|+||+|.+|
T Consensus 231 ~~~~~~~~~y-~LPDg~--~i~l~~er~~~~E~LF~P~~~g~~~~gi~~~i~~si~~c~~d~r~~L~~nIvL~GG~Sl~~ 307 (375)
T PTZ00452 231 KESNSQDSPY-KLPDGN--ILTIKSQKFRCSEILFQPKLIGLEVAGIHHLAYSSIKKCDLDLRQELCRNIVLSGGTTLFP 307 (375)
T ss_pred hccCCcCceE-ECCCCC--EEEeehHHhcCcccccChhhcCCCCCChhHHHHHHHHhCCHhHHHHhhccEEEeccccccc
Confidence 000011 122333 345666655 23444432 24566777777766432 22246799999999999
Q ss_pred HHHHHHHHHc----CC-c--cccccCCCchhHHhHHHHHHH
Q psy6736 330 KVQKLLQDFF----NG-K--ELNKSINPDEAVAYGAAVQAA 363 (1023)
Q Consensus 330 ~v~~~l~~~f----~~-~--~i~~~~~pd~aVa~GAa~~a~ 363 (1023)
.+.++|++.+ +. . ++..+.++..++=.|++++|.
T Consensus 308 Gf~~RL~~El~~~~p~~~~v~v~~~~~r~~~aW~GgSilas 348 (375)
T PTZ00452 308 GIANRLSNELTNLVPSQLKIQVAAPPDRRFSAWIGGSIQCT 348 (375)
T ss_pred CHHHHHHHHHHHhCCCCceeEEecCCCcceeEEECchhhcC
Confidence 9999988765 21 1 233344556677788888875
No 79
>PTZ00466 actin-like protein; Provisional
Probab=98.54 E-value=3.3e-06 Score=96.59 Aligned_cols=242 Identities=15% Similarity=0.106 Sum_probs=146.2
Q ss_pred cccccCHHHHHhHhhhhccCcchHHHHHHHHHhCC--cCCcceEecCCCCCHHHHHHHHHH-HHHcCCceeeeecchHHH
Q psy6736 79 RLKAVSAQELSRGVKAIFTAPDILKKKTSEDILRK--VDGQNEGLIPAYFNISSVKSTKDS-GTIAGLNVLRIINEPTAA 155 (1023)
Q Consensus 79 ~~~~~~~~~v~a~~L~~~~~~~~~l~~~a~~~~~~--~~~~~vitVPa~~~~~qr~~l~~A-a~~AGl~~~~li~Ep~AA 155 (1023)
..+.+..-+....++ +++.+ .++. .-..+++|-|+.++..+|+.|.+. .+..|+.-+.+.++|.+|
T Consensus 79 ~~G~v~dwd~~e~iw-------~~~f~----~l~v~~~~~pvllte~~~~~~~~re~~~e~lFE~~~~p~~~~~~~~~ls 147 (380)
T PTZ00466 79 NHGIIENWNDMENIW-------IHVYN----SMKINSEEHPVLLTEAPLNPQKNKEKIAEVFFETFNVPALFISIQAILS 147 (380)
T ss_pred cCCeECCHHHHHHHH-------HHHHh----hcccCCccCeEEEecCccccHHHHHHHHHHHhccCCCCeEEEecchHHH
Confidence 334455555555555 55543 2332 235688999999999999987554 466789999999999999
Q ss_pred HHHhccccccCccccccCCCCCcEEEEEEeCCceEEEEEEEEeCCEEEEEEecCCCCccHHHHHHHHHHHHHHHHHhhhc
Q psy6736 156 AIAYGLDKKVGSTAVEYNGSGERNVLIFDLGGGTFDVSILTIEDGIFEVKSTAGDTHLGGEDFDNRMVNHFVQEFKRKYK 235 (1023)
Q Consensus 156 al~y~~~~~~~~~~~~~~~~~~~~vlV~D~GggT~dvsv~~~~~~~~~v~~~~~~~~lGG~~~D~~l~~~l~~~~~~~~~ 235 (1023)
+++++. .+-+|+|+|.+.|.++-+. ++..-. .......+||.++++.|.+.+.+. +
T Consensus 148 l~a~g~----------------~tglVVD~G~~~t~v~PV~--~G~~~~-~~~~~~~~GG~~lt~~L~~lL~~~-----~ 203 (380)
T PTZ00466 148 LYSCGK----------------TNGTVLDCGDGVCHCVSIY--EGYSIT-NTITRTDVAGRDITTYLGYLLRKN-----G 203 (380)
T ss_pred HHhcCC----------------ceEEEEeCCCCceEEEEEE--CCEEee-cceeEecCchhHHHHHHHHHHHhc-----C
Confidence 987643 2469999999999987654 332211 122225799999999998877531 1
Q ss_pred cCccccHHHHHHHHHHHHHHhHHcCCC-------------CceEEEEecccCCceeEEEecHHHH---HHHhHHHH----
Q psy6736 236 KDLTTNKRALRRLRTACERAKRTLSSS-------------TQASIEIDSLFEGVDFYTSITRARF---EELNADLF---- 295 (1023)
Q Consensus 236 ~~~~~~~~~~~~L~~~ae~~K~~Ls~~-------------~~~~i~i~~~~~~~~~~~~itr~~~---e~~~~~~~---- 295 (1023)
..... . .-+..++.+|+.+..- .......+ +.+|. .+.+..+.| |-++.|-+
T Consensus 204 ~~~~~-~----~~~~~v~~iKe~~c~v~~d~~~e~~~~~~~~~~~~y~-LPdg~--~i~l~~er~~~~E~LF~P~~~g~~ 275 (380)
T PTZ00466 204 HLFNT-S----AEMEVVKNMKENCCYVSFNMNKEKNSSEKALTTLPYI-LPDGS--QILIGSERYRAPEVLFNPSILGLE 275 (380)
T ss_pred CCCCc-H----HHHHHHHHHHHhCeEecCChHHHHhhccccccceeEE-CCCCc--EEEEchHHhcCcccccCccccCCC
Confidence 11110 0 1112344455543211 00001111 22333 345565555 23444422
Q ss_pred -HHHHHHHHHHHHHcCCC--ccCcCeEEEEcCCCCcHHHHHHHHHHcCC-----c--cccccCCCchhHHhHHHHHHH
Q psy6736 296 -RGTMEPVEKSLRDAKMD--KAQIHDIVLVGGSTRIPKVQKLLQDFFNG-----K--ELNKSINPDEAVAYGAAVQAA 363 (1023)
Q Consensus 296 -~~i~~~i~~~l~~~~~~--~~~i~~V~LvGG~sr~p~v~~~l~~~f~~-----~--~i~~~~~pd~aVa~GAa~~a~ 363 (1023)
..+.+.|.+.+.++... +.=...|+|+||+|.+|.+.++|+..+.. . .+..+.++..++=+||+++|.
T Consensus 276 ~~gl~~~i~~sI~~c~~d~r~~L~~nIvL~GG~Sl~~Gf~~RL~~EL~~l~p~~~~v~v~~~~~r~~~aW~GgSilas 353 (380)
T PTZ00466 276 YLGLSELIVTSITRADMDLRRTLYSHIVLSGGTTMFHGFGDRLLNEIRKFAPKDITIRISAPPERKFSTFIGGSILAS 353 (380)
T ss_pred CCCHHHHHHHHHHhCChhhHHHHhhcEEEeCCccccCCHHHHHHHHHHHhCCCCceEEEecCCCCceeEEECchhhcC
Confidence 24566777777766433 22246799999999999999999877621 1 233344666777889888875
No 80
>TIGR00241 CoA_E_activ CoA-substrate-specific enzyme activase, putative. This domain may be involved in generating or regenerating the active sites of enzymes related to (R)-2-hydroxyglutaryl-CoA dehydratase and benzoyl-CoA reductase.
Probab=98.35 E-value=4.9e-06 Score=89.61 Aligned_cols=170 Identities=19% Similarity=0.239 Sum_probs=103.4
Q ss_pred eeecchHHHHHHhccccccCccccccCCCCCcEEEEEEeCCceEEEEEEEEeCCEEEEEEecCCCCccHHHHHHHHHHHH
Q psy6736 147 RIINEPTAAAIAYGLDKKVGSTAVEYNGSGERNVLIFDLGGGTFDVSILTIEDGIFEVKSTAGDTHLGGEDFDNRMVNHF 226 (1023)
Q Consensus 147 ~li~Ep~AAal~y~~~~~~~~~~~~~~~~~~~~vlV~D~GggT~dvsv~~~~~~~~~v~~~~~~~~lGG~~~D~~l~~~l 226 (1023)
..++|.+|-+.....-.. ..=.|+|+||..+-+..++ ++.+.-.........|+..|.+.+++.+
T Consensus 73 ~~~~ei~~~~~g~~~~~~-------------~~~~vidiGgqd~k~i~~~--~g~~~~~~~n~~ca~Gtg~f~e~~a~~l 137 (248)
T TIGR00241 73 KIVTEISCHGKGANYLAP-------------EARGVIDIGGQDSKVIKID--DGKVDDFTMNDKCAAGTGRFLEVTARRL 137 (248)
T ss_pred CceEEhhHHHHHHHHHCC-------------CCCEEEEecCCeeEEEEEC--CCcEeeeeecCcccccccHHHHHHHHHc
Confidence 367788876554322211 1225999999988887776 4544433445556778888888887664
Q ss_pred HHHHHhhhccCccccHHHHHHHHHHHHHHhHHc----CCCCceEEEEec-ccCCceeEEEecHHHHHHHhHHHHHHHHHH
Q psy6736 227 VQEFKRKYKKDLTTNKRALRRLRTACERAKRTL----SSSTQASIEIDS-LFEGVDFYTSITRARFEELNADLFRGTMEP 301 (1023)
Q Consensus 227 ~~~~~~~~~~~~~~~~~~~~~L~~~ae~~K~~L----s~~~~~~i~i~~-~~~~~~~~~~itr~~~e~~~~~~~~~i~~~ 301 (1023)
--.+. +++..+..- .-+....+..+. +.... .-..++ ++++..+++.+...
T Consensus 138 ~~~~~-------------------e~~~~~~~~~~~~~~~~~c~vf~~s~vi~~l--~~g~~~---~di~~~~~~~va~~ 193 (248)
T TIGR00241 138 GVSVE-------------------ELGSLAEKADRKAKISSMCTVFAESELISLL--AAGVKK---EDILAGVYESIAER 193 (248)
T ss_pred CCCHH-------------------HHHHHHhcCCCCCCcCCEeEEEechhHHHHH--HCCCCH---HHHHHHHHHHHHHH
Confidence 42222 222222221 111112222211 00000 001122 45666666666666
Q ss_pred HHHHHHHcCCCccCcC-eEEEEcCCCCcHHHHHHHHHHcCCccccccCCCchhHHhHHHHH
Q psy6736 302 VEKSLRDAKMDKAQIH-DIVLVGGSTRIPKVQKLLQDFFNGKELNKSINPDEAVAYGAAVQ 361 (1023)
Q Consensus 302 i~~~l~~~~~~~~~i~-~V~LvGG~sr~p~v~~~l~~~f~~~~i~~~~~pd~aVa~GAa~~ 361 (1023)
+.+.+...+ ++ .|+|+||.+++|++.+.+++.+ +.++..+.+|..+.|+|||++
T Consensus 194 i~~~~~~~~-----~~~~Vvl~GGva~n~~l~~~l~~~l-g~~v~~~~~~~~~~AlGaAl~ 248 (248)
T TIGR00241 194 VAEMLQRLK-----IEAPIVFTGGVSKNKGLVKALEKKL-GMKVITPPEPQIVGAVGAALL 248 (248)
T ss_pred HHHHHhhcC-----CCCCEEEECccccCHHHHHHHHHHh-CCcEEcCCCccHHHHHHHHhC
Confidence 666665433 44 7999999999999999999999 788888889999999999973
No 81
>COG4972 PilM Tfp pilus assembly protein, ATPase PilM [Cell motility and secretion / Intracellular trafficking and secretion]
Probab=98.35 E-value=3.5e-05 Score=81.81 Aligned_cols=168 Identities=18% Similarity=0.246 Sum_probs=110.6
Q ss_pred HHHHHHHHHcCCceeeeecchHHHHHHhccc-cccCccccccCCCCCcEEEEEEeCCceEEEEEEEEeCCEEEEEEecCC
Q psy6736 132 KSTKDSGTIAGLNVLRIINEPTAAAIAYGLD-KKVGSTAVEYNGSGERNVLIFDLGGGTFDVSILTIEDGIFEVKSTAGD 210 (1023)
Q Consensus 132 ~~l~~Aa~~AGl~~~~li~Ep~AAal~y~~~-~~~~~~~~~~~~~~~~~vlV~D~GggT~dvsv~~~~~~~~~v~~~~~~ 210 (1023)
....+|+++|||+...+=-|.-|.--+|..- .... ......+++|+|+|+..+.+.++.-+...+ ..+
T Consensus 152 ~~ri~a~~~AGl~~~vlDV~~fAl~ra~~~~~~~~~------~~~a~~~vav~~Igat~s~l~vi~~gk~ly-----~r~ 220 (354)
T COG4972 152 ESRIDAFELAGLEPKVLDVESFALLRAYRLLASQFG------PEEAAMKVAVFDIGATSSELLVIQDGKILY-----TRE 220 (354)
T ss_pred HHHHHHHHHcCCCceEEehHHHHHHHHHHHHHHHhC------CchhhhhheeeeecccceEEEEEECCeeee-----Eee
Confidence 4467889999998877777777775555411 1111 001233479999999999999987654444 455
Q ss_pred CCccHHHHHHHHHHHHHHHHHhhhccCccccHHHHHHHHHHHHHHhHHcCCCCceEEEEecccCCceeEEEecHHHHHHH
Q psy6736 211 THLGGEDFDNRMVNHFVQEFKRKYKKDLTTNKRALRRLRTACERAKRTLSSSTQASIEIDSLFEGVDFYTSITRARFEEL 290 (1023)
Q Consensus 211 ~~lGG~~~D~~l~~~l~~~~~~~~~~~~~~~~~~~~~L~~~ae~~K~~Ls~~~~~~i~i~~~~~~~~~~~~itr~~~e~~ 290 (1023)
..+||+.++.++...+--.+. .++.+|....-.. +--.++
T Consensus 221 ~~~g~~Qlt~~i~r~~~L~~~-------------------~a~~~k~~~~~P~---------------------~y~~~v 260 (354)
T COG4972 221 VPVGTDQLTQEIQRAYSLTEE-------------------KAEEIKRGGTLPT---------------------DYGSEV 260 (354)
T ss_pred ccCcHHHHHHHHHHHhCCChh-------------------HhHHHHhCCCCCC---------------------chhHHH
Confidence 789999999988755432222 4566665543221 122345
Q ss_pred hHHHHHHHHHHHHHHHHHc--CCCccCcCeEEEEcCCCCcHHHHHHHHHHcCCccccccCCCch
Q psy6736 291 NADLFRGTMEPVEKSLRDA--KMDKAQIHDIVLVGGSTRIPKVQKLLQDFFNGKELNKSINPDE 352 (1023)
Q Consensus 291 ~~~~~~~i~~~i~~~l~~~--~~~~~~i~~V~LvGG~sr~p~v~~~l~~~f~~~~i~~~~~pd~ 352 (1023)
..+++..+.+.|.+.|+-. .-...+|+.|+|.||++++-.+.+++.+.+ +.+.. ..||..
T Consensus 261 l~~f~~~l~~ei~Rslqfy~~~s~~~~id~i~LaGggA~l~gL~~~i~qrl-~~~t~-vanPf~ 322 (354)
T COG4972 261 LRPFLGELTQEIRRSLQFYLSQSEMVDIDQILLAGGGASLEGLAAAIQQRL-SIPTE-VANPFA 322 (354)
T ss_pred HHHHHHHHHHHHHHHHHHHHhccccceeeEEEEecCCcchhhHHHHHHHHh-CCCeE-eeCHHH
Confidence 6677777777777776632 234567999999999999999999999998 44332 235543
No 82
>PF07520 SrfB: Virulence factor SrfB; InterPro: IPR009216 This entry represents proteins of unknown function. It has been shown in Salmonella enterica that srfB is one of the genes activated by the global signal transduction/regulatory system SsrA/B []. This activation takes place within eukaryotic cells. The activated genes include pathogenicity island 2 (SPI-2) genes and at least 10 other genes (srfB is one of them) which are believed to be horizontally acquired, and to be involved in virulence/pathogenicity [].
Probab=98.28 E-value=6.7e-05 Score=91.31 Aligned_cols=272 Identities=15% Similarity=0.154 Sum_probs=154.3
Q ss_pred cccCHHHHHhHhhhhccCcchHHHHHHHHHhC--------------CcCCcceEecCCCCCHHHHHHHHHHHHHc-----
Q psy6736 81 KAVSAQELSRGVKAIFTAPDILKKKTSEDILR--------------KVDGQNEGLIPAYFNISSVKSTKDSGTIA----- 141 (1023)
Q Consensus 81 ~~~~~~~v~a~~L~~~~~~~~~l~~~a~~~~~--------------~~~~~~vitVPa~~~~~qr~~l~~Aa~~A----- 141 (1023)
..|+..-+..++| ..+.-+|-.+.+ ...+.+++|||.-....+|+.+++.++.|
T Consensus 415 p~ySRSSLMtfML-------~EiL~QAL~QINSpa~R~r~~~~~~PR~LR~IILT~P~AMPk~Er~ifr~r~~~Ai~LvW 487 (1002)
T PF07520_consen 415 PHYSRSSLMTFML-------SEILAQALMQINSPAQRLRRGHSDAPRRLRRIILTLPPAMPKPEREIFRRRMEEAIGLVW 487 (1002)
T ss_pred ccccHHHHHHHHH-------HHHHHHHHHHhcCHHHHhhcccCCCChhhhheeEECCCCCCHHHHHHHHHHHHHHHHHHH
Confidence 4467777877777 777777755432 23457999999999999999988888776
Q ss_pred ---CCc---------------------eeeeecchHHHHHHhccc------------------cccCccccccCCCCCcE
Q psy6736 142 ---GLN---------------------VLRIINEPTAAAIAYGLD------------------KKVGSTAVEYNGSGERN 179 (1023)
Q Consensus 142 ---Gl~---------------------~~~li~Ep~AAal~y~~~------------------~~~~~~~~~~~~~~~~~ 179 (1023)
|.. +.-=.+|.+|.-+-|.+. +............+.-+
T Consensus 488 k~lGw~~~~~~~~~~~~~~~~~~~~P~v~~~WDEATC~QlVyLYnE~~~~fgG~~~~FF~~~~rp~~~~~~~~~~~~slr 567 (1002)
T PF07520_consen 488 KALGWHPWDDDFDTNKDREKSWVPLPEVQMEWDEATCGQLVYLYNEIQVKFGGRAEEFFALMARPDRQPAPGEDPGPSLR 567 (1002)
T ss_pred HHcCCCCCCCCcccccccccccCCCCceeEEeecceeeeeeehhHHHHHHcCCCHHHHHHHhcCCCccccccCCCCCceE
Confidence 421 112246666654433211 11000000011223557
Q ss_pred EEEEEeCCceEEEEEEEEe----CC-EEEE----EEecCCCCccHHHHHHHHHH-HHHHHHHhh----------------
Q psy6736 180 VLIFDLGGGTFDVSILTIE----DG-IFEV----KSTAGDTHLGGEDFDNRMVN-HFVQEFKRK---------------- 233 (1023)
Q Consensus 180 vlV~D~GggT~dvsv~~~~----~~-~~~v----~~~~~~~~lGG~~~D~~l~~-~l~~~~~~~---------------- 233 (1023)
+.-+|+||||||+.|-.+. .+ ...+ +...| -.+.|+||=..+++ +++..+.+.
T Consensus 568 iASIDIGGGTTDL~It~Y~ld~G~g~nv~I~P~q~FReG-FkvAGDDiLldVI~~~VlPal~~aL~~aG~~~~~~ll~~L 646 (1002)
T PF07520_consen 568 IASIDIGGGTTDLMITQYRLDDGQGSNVKITPEQLFREG-FKVAGDDILLDVIQRIVLPALQQALKKAGVADPRALLSRL 646 (1002)
T ss_pred EEEEecCCCcceeeEEEEEeccCCcceeEECcchhhhhh-cccccHHHHHHHHHHHhHHHHHHHHHHhcccCHHHHHHHH
Confidence 8999999999999998775 22 2221 12223 45788888766654 444333321
Q ss_pred hccCccccH-H-------------HHHHHHHHHHHHhHHcCCCCceEEEEecc---------------------------
Q psy6736 234 YKKDLTTNK-R-------------ALRRLRTACERAKRTLSSSTQASIEIDSL--------------------------- 272 (1023)
Q Consensus 234 ~~~~~~~~~-~-------------~~~~L~~~ae~~K~~Ls~~~~~~i~i~~~--------------------------- 272 (1023)
+|.+-.... + ...+++.++|+.-..- ........+..+
T Consensus 647 fG~dg~~~~~~~lRqQ~~lQv~~Pi~l~iL~~yE~~d~~~-~~~~~~~~f~ell~~~~Pt~~vl~yi~~~~~~~~~~~~~ 725 (1002)
T PF07520_consen 647 FGGDGQSDQDRVLRQQFTLQVFIPIGLAILKAYENYDPLD-PSAEIDATFGELLEREPPTAAVLDYINEEVRRLPAGAPD 725 (1002)
T ss_pred hCCcchhHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCccc-cCccccccHHHhcCCcCCcHHHHHHHHHHHhhcCCCCCC
Confidence 222211000 0 0112333444422100 000000100000
Q ss_pred cCCceeEEEecHHHHHHHhH---HHHHHHHHHHHHHHHHcCCCccCcCeEEEEcCCCCcHHHHHHHHHHcCCc-------
Q psy6736 273 FEGVDFYTSITRARFEELNA---DLFRGTMEPVEKSLRDAKMDKAQIHDIVLVGGSTRIPKVQKLLQDFFNGK------- 342 (1023)
Q Consensus 273 ~~~~~~~~~itr~~~e~~~~---~~~~~i~~~i~~~l~~~~~~~~~i~~V~LvGG~sr~p~v~~~l~~~f~~~------- 342 (1023)
.+-.+..+.|+..++...+- -.+..++..+-+++.. .+.|.++|+|--||+|.||..+++..+-.
T Consensus 726 Fdildv~l~i~~~~l~~~~~~~r~~i~~~L~~LcEvv~~-----Y~CDVLLLTGRPSrlPgvqalfr~~~pvPp~RIv~l 800 (1002)
T PF07520_consen 726 FDILDVPLEIDLEKLHAAFLSDRMVICKTLRALCEVVHH-----YDCDVLLLTGRPSRLPGVQALFRHLLPVPPDRIVPL 800 (1002)
T ss_pred cceecceEEEcHHHHHHHHHhCcccHHHHHHHHHHHHHH-----hCCCEEEEcCCccccHHHHHHHHHhCCCCcccEEec
Confidence 11124467888888887664 4455555555555544 34689999999999999999999987311
Q ss_pred ------------cccccCCCchhHHhHHHHHHHHHh
Q psy6736 343 ------------ELNKSINPDEAVAYGAAVQAAILH 366 (1023)
Q Consensus 343 ------------~i~~~~~pd~aVa~GAa~~a~~l~ 366 (1023)
.-..--||...||.||.+++....
T Consensus 801 ~~Y~tg~WYPF~~~~rI~dPKTTaaVGAmLc~La~~ 836 (1002)
T PF07520_consen 801 HGYRTGNWYPFNDQGRIDDPKTTAAVGAMLCLLAEG 836 (1002)
T ss_pred CCeeecccccCCCCCcCCCchHHHHHHHHHHHHhcc
Confidence 111233899999999998775443
No 83
>PF11104 PilM_2: Type IV pilus assembly protein PilM;; PDB: 2YCH_A.
Probab=98.26 E-value=6.9e-06 Score=92.91 Aligned_cols=140 Identities=21% Similarity=0.327 Sum_probs=86.1
Q ss_pred cceEEEEEeCCceEEEEEEEEeCCEEEEEEecCCCCCcHHHHHHHHHHHHHHHHHhhhccCcchhHHHHHHHHHHHHHHh
Q psy6736 634 ERNVLIFDLGGGTFDVSILTIEDGIFEVKSTAGDTHLGGEDFDNRMVNHFVQEFKRKYKKDLTTNKRALRRLRTACERAK 713 (1023)
Q Consensus 634 ~~~vlV~D~GggT~dvsi~~~~~~~~~v~~~~gd~~lGG~~~D~~l~~~~~~~~~~~~~~~~~~~~~~~~~L~~~~e~~K 713 (1023)
...++++|+|+.++.++++. ++.+...-+ ..+||.+++++|++.+--.+ ..||..|
T Consensus 179 ~~~~~lvdiG~~~t~~~i~~--~g~~~f~R~---i~~G~~~l~~~i~~~~~i~~-------------------~~Ae~~k 234 (340)
T PF11104_consen 179 AETVALVDIGASSTTVIIFQ--NGKPIFSRS---IPIGGNDLTEAIARELGIDF-------------------EEAEELK 234 (340)
T ss_dssp T-EEEEEEE-SS-EEEEEEE--TTEEEEEEE---ES-SHHHHHHHHHHHTT--H-------------------HHHHHHH
T ss_pred cceEEEEEecCCeEEEEEEE--CCEEEEEEE---EeeCHHHHHHHHHHhcCCCH-------------------HHHHHHH
Confidence 45799999999999999977 666554433 46999999999986542221 2445555
Q ss_pred hhcCCCceeEEEEecccCCcceEEEecHHHHHHHHHHHHHHHHHHHHHHHHH--cCCCccccceEEEecCccCcHHHHHH
Q psy6736 714 RTLSSSTQASIEIDSLFEGVDFYTSITRARFEELNADLFRGTMEPVEKSLRD--AKMDKAQIHDIVLVGGSTRIPKVQKL 791 (1023)
Q Consensus 714 ~~Ls~~~~~~~~i~~~~~~~~~~~~itr~~~~~~~~~~~~~~~~~i~~~l~~--~~~~~~~i~~V~LvGG~srip~v~~~ 791 (1023)
..-+-.. +...+.+.+.++++..-|.+.++- +......|+.|+|+||++++|.+.+.
T Consensus 235 ~~~~l~~---------------------~~~~~~l~~~~~~l~~EI~rsl~~y~~~~~~~~i~~I~L~Ggga~l~gL~~~ 293 (340)
T PF11104_consen 235 RSGGLPE---------------------EYDQDALRPFLEELAREIRRSLDFYQSQSGGESIERIYLSGGGARLPGLAEY 293 (340)
T ss_dssp HHT---------------------------HHHHHHHHHHHHHHHHHHHHHHHHHH------SEEEEESGGGGSTTHHHH
T ss_pred hcCCCCc---------------------chHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCEEEEECCccchhhHHHH
Confidence 4311000 223455666677777777777662 23345679999999999999999999
Q ss_pred HHHhhcCccc---------CCCC----------CCccceecchHHHH
Q psy6736 792 LQDFFNGKEL---------NKSI----------NPDEAVAYGAAVQA 819 (1023)
Q Consensus 792 l~~~f~~~~~---------~~~~----------~p~~aVa~GAa~~a 819 (1023)
|++.++ .++ .... .|+.+||.|.|+..
T Consensus 294 l~~~l~-~~v~~~~p~~~~~~~~~~~~~~~~~~~~~~avA~GLAlR~ 339 (340)
T PF11104_consen 294 LSEELG-IPVEVINPFKNIKLDPKINSEYLQEDAPQFAVALGLALRG 339 (340)
T ss_dssp HHHHHT-SEEEE--GGGGSB--TTS-HHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHC-CceEEcChHHhCccCcccChhhhhhhhhHHHHHHHHhhcC
Confidence 999983 221 1111 35678888888764
No 84
>cd00012 ACTIN Actin; An ubiquitous protein involved in the formation of filaments that are a major component of the cytoskeleton. Interaction with myosin provides the basis of muscular contraction and many aspects of cell motility. Each actin protomer binds one molecule of ATP and either calcium or magnesium ions. Actin exists as a monomer in low salt concentrations, but filaments form rapidly as salt concentration rises, with the consequent hydrolysis of ATP. Polymerization is regulated by so-called capping proteins. The ATPase domain of actin shares similarity with ATPase domains of hexokinase and hsp70 proteins.
Probab=98.23 E-value=2.8e-06 Score=97.60 Aligned_cols=168 Identities=23% Similarity=0.275 Sum_probs=106.4
Q ss_pred ceEEEEEeCCceEEEEEEEEeCCEEEEEEecCCCCCcHHHHHHHHHHHHHHHHHhhhccCcchhHHHHHHHHHHHHHHhh
Q psy6736 635 RNVLIFDLGGGTFDVSILTIEDGIFEVKSTAGDTHLGGEDFDNRMVNHFVQEFKRKYKKDLTTNKRALRRLRTACERAKR 714 (1023)
Q Consensus 635 ~~vlV~D~GggT~dvsi~~~~~~~~~v~~~~gd~~lGG~~~D~~l~~~~~~~~~~~~~~~~~~~~~~~~~L~~~~e~~K~ 714 (1023)
.+-+|+|+|+++++++.+. +|..-- .......+||+++|+.|.+++..... ..+... -...++.+|+
T Consensus 143 ~~~lVVDiG~~~t~i~pv~--~G~~~~-~~~~~~~~GG~~l~~~l~~~l~~~~~---~~~~~~-------~~~~~~~iKe 209 (371)
T cd00012 143 TTGLVVDSGDGVTHVVPVY--DGYVLP-HAIKRLDLAGRDLTRYLKELLRERGY---ELNSSD-------EREIVRDIKE 209 (371)
T ss_pred CeEEEEECCCCeeEEEEEE--CCEEch-hhheeccccHHHHHHHHHHHHHhcCC---Cccchh-------HHHHHHHHHH
Confidence 6799999999999998876 554322 22234679999999999998765421 001111 1223455555
Q ss_pred hcCCCc-----------------eeEEEEecccCCcceEEEecHHHHHHHHHHHHH---------HHHHHHHHHHHHcCC
Q psy6736 715 TLSSST-----------------QASIEIDSLFEGVDFYTSITRARFEELNADLFR---------GTMEPVEKSLRDAKM 768 (1023)
Q Consensus 715 ~Ls~~~-----------------~~~~~i~~~~~~~~~~~~itr~~~~~~~~~~~~---------~~~~~i~~~l~~~~~ 768 (1023)
.+..-. ..... +.++ ..+.++.+.| .+.+.+|+ .+.+.|.++|.....
T Consensus 210 ~~~~v~~~~~~~~~~~~~~~~~~~~~~~---lpd~--~~i~~~~er~-~~~E~lF~p~~~~~~~~~i~~~i~~~i~~~~~ 283 (371)
T cd00012 210 KLCYVALDIEEEQDKSAKETSLLEKTYE---LPDG--RTIKVGNERF-RAPEILFNPSLIGSEQVGISEAIYSSINKCDI 283 (371)
T ss_pred hheeecCCHHHHHHhhhccCCccceeEE---CCCC--eEEEEChHHh-hChHhcCChhhcCCCcCCHHHHHHHHHHhCCH
Confidence 542210 00111 1122 2455665544 33444444 677888888876543
Q ss_pred C--ccccceEEEecCccCcHHHHHHHHHhhcC---------cccCCCCCCccceecchHHHHHH
Q psy6736 769 D--KAQIHDIVLVGGSTRIPKVQKLLQDFFNG---------KELNKSINPDEAVAYGAAVQAAI 821 (1023)
Q Consensus 769 ~--~~~i~~V~LvGG~srip~v~~~l~~~f~~---------~~~~~~~~p~~aVa~GAa~~a~~ 821 (1023)
+ ..-.+.|+|+||+|++|.+.+.|.+.+.. ..+....+|..++-+||+++|..
T Consensus 284 ~~~~~l~~~Ivl~GG~s~~~gl~~rl~~el~~~~~~~~~~~~~~~~~~~~~~~aw~G~si~as~ 347 (371)
T cd00012 284 DLRKDLYSNIVLSGGSTLFPGFGERLQKELLKLAPPSKDTKVKVIAPPERKYSVWLGGSILASL 347 (371)
T ss_pred hHHHHHHhCEEEeCCccCCcCHHHHHHHHHHHhCCcccceEEEEccCCCccccEEeCchhhcCc
Confidence 2 23467899999999999999999987742 12335568899999999999954
No 85
>TIGR01175 pilM type IV pilus assembly protein PilM. This protein is required for the assembly of the type IV fimbria in Pseudomonas aeruginosa responsible for twitching motility, and for a similar pilus-like structure in Synechocystis. It is also found in species such as Deinococcus described as having natural transformation (for which a type IV pilus-like structure is proposed) but not fimbria.
Probab=98.17 E-value=1.4e-05 Score=91.10 Aligned_cols=117 Identities=12% Similarity=0.235 Sum_probs=79.7
Q ss_pred eEEEEEeCCceEEEEEEEEeCCEEEEEEecCCCCCcHHHHHHHHHHHHHHHHHhhhccCcchhHHHHHHHHHHHHHHhhh
Q psy6736 636 NVLIFDLGGGTFDVSILTIEDGIFEVKSTAGDTHLGGEDFDNRMVNHFVQEFKRKYKKDLTTNKRALRRLRTACERAKRT 715 (1023)
Q Consensus 636 ~vlV~D~GggT~dvsi~~~~~~~~~v~~~~gd~~lGG~~~D~~l~~~~~~~~~~~~~~~~~~~~~~~~~L~~~~e~~K~~ 715 (1023)
+++++|+|++++++++++ ++.+....+ ..+||.++++.|.+.+ +.+ ...||+.|..
T Consensus 189 ~~~lvdiG~~~t~l~i~~--~g~~~~~r~---i~~G~~~i~~~i~~~~--------~~~-----------~~~Ae~~k~~ 244 (348)
T TIGR01175 189 DAALVDIGATSSTLNLLH--PGRMLFTRE---VPFGTRQLTSELSRAY--------GLN-----------PEEAGEAKQQ 244 (348)
T ss_pred eEEEEEECCCcEEEEEEE--CCeEEEEEE---eechHHHHHHHHHHHc--------CCC-----------HHHHHHHHhc
Confidence 499999999999999986 665544433 5699999999887432 211 2456777764
Q ss_pred cCCCceeEEEEecccCCcceEEEecHHHHHHHHHHHHHHHHHHHHHHHHHc--CCCccccceEEEecCccCcHHHHHHHH
Q psy6736 716 LSSSTQASIEIDSLFEGVDFYTSITRARFEELNADLFRGTMEPVEKSLRDA--KMDKAQIHDIVLVGGSTRIPKVQKLLQ 793 (1023)
Q Consensus 716 Ls~~~~~~~~i~~~~~~~~~~~~itr~~~~~~~~~~~~~~~~~i~~~l~~~--~~~~~~i~~V~LvGG~srip~v~~~l~ 793 (1023)
-..... . -.+++++.++++..-|.+.|+.. ......++.|+|+||++++|.+.+.++
T Consensus 245 ~~~~~~-------------~--------~~~~~~~~~~~l~~eI~~~l~~~~~~~~~~~i~~I~LtGgga~~~gl~~~l~ 303 (348)
T TIGR01175 245 GGLPLL-------------Y--------DPEVLRRFKGELVDEIRRSLQFFTAQSGTNSLDGLVLAGGGATLSGLDAAIY 303 (348)
T ss_pred CCCCCc-------------h--------hHHHHHHHHHHHHHHHHHHHHhhcCCCCCcccceEEEECccccchhHHHHHH
Confidence 321110 0 02345566666666666666532 222345899999999999999999999
Q ss_pred Hhhc
Q psy6736 794 DFFN 797 (1023)
Q Consensus 794 ~~f~ 797 (1023)
+.|+
T Consensus 304 ~~l~ 307 (348)
T TIGR01175 304 QRLG 307 (348)
T ss_pred HHHC
Confidence 9994
No 86
>KOG0679|consensus
Probab=98.16 E-value=0.00024 Score=76.70 Aligned_cols=122 Identities=14% Similarity=0.092 Sum_probs=85.5
Q ss_pred cccCHHHHHhHhhhhccCcchHHHHHHHHHhCCcCCcceEecCCCCCHHHHHHHH-HHHHHcCCceeeeecchHHHHHHh
Q psy6736 81 KAVSAQELSRGVKAIFTAPDILKKKTSEDILRKVDGQNEGLIPAYFNISSVKSTK-DSGTIAGLNVLRIINEPTAAAIAY 159 (1023)
Q Consensus 81 ~~~~~~~v~a~~L~~~~~~~~~l~~~a~~~~~~~~~~~vitVPa~~~~~qr~~l~-~Aa~~AGl~~~~li~Ep~AAal~y 159 (1023)
+-+..=++..+++ +|..+.-- +....---++||-|++=+..+|+.+. -+.+...+....|..+|+++|++-
T Consensus 80 Glv~dWD~~~~~w-------~~~~~~~L-k~~p~ehP~litEp~wN~~~~Rek~~ElmFE~~nvPAf~L~k~~v~~AFA~ 151 (426)
T KOG0679|consen 80 GLVEDWDLFEMQW-------RYAYKNQL-KVNPEEHPVLITEPPWNTRANREKLTELMFEKLNVPAFYLAKTAVCTAFAN 151 (426)
T ss_pred CCcccHHHHHHHH-------HHHHhhhh-hcCccccceeeecCCCCcHHHHHHHHHHHHhhcCCceEEEechHHHHHHhc
Confidence 4455556666666 66553211 12222346899999888888887654 455777889999999999999876
Q ss_pred ccccccCccccccCCCCCcEEEEEEeCCceEEEEEEEEeCCEEEEEEecCCCCccHHHHHHHHHHHHHHH
Q psy6736 160 GLDKKVGSTAVEYNGSGERNVLIFDLGGGTFDVSILTIEDGIFEVKSTAGDTHLGGEDFDNRMVNHFVQE 229 (1023)
Q Consensus 160 ~~~~~~~~~~~~~~~~~~~~vlV~D~GggT~dvsv~~~~~~~~~v~~~~~~~~lGG~~~D~~l~~~l~~~ 229 (1023)
| ..+.||+|+|++++.++-+. +|.+--.+... ..+||+.++..+.+.|..+
T Consensus 152 G----------------rstalVvDiGa~~~svsPV~--DG~Vlqk~vvk-s~laGdFl~~~~~q~l~~~ 202 (426)
T KOG0679|consen 152 G----------------RSTALVVDIGATHTSVSPVH--DGYVLQKGVVK-SPLAGDFLNDQCRQLLEPK 202 (426)
T ss_pred C----------------CCceEEEEecCCCceeeeee--cceEeeeeeEe-cccchHHHHHHHHHHHhhc
Confidence 4 23579999999999988765 33333333333 6899999999999988754
No 87
>TIGR03739 PRTRC_D PRTRC system protein D. A novel genetic system characterized by six major proteins, included a ParB homolog and a ThiF homolog, is designated PRTRC, or ParB-Related,ThiF-Related Cassette. It is often found on plasmids. This protein family is designated PRTRC system protein D. The gray zone, between trusted and noise, includes proteins found in the same genomes as other proteins of the PRTRC systems, but not in the same contiguous gene region.
Probab=98.01 E-value=3.1e-05 Score=86.69 Aligned_cols=154 Identities=19% Similarity=0.213 Sum_probs=91.0
Q ss_pred CcceEEEEEeCCceEEEEEEEEeCCEEEEEEecCCCCCcHHHHHHHHHHHHHHHHHhhhccCcchhHHHHHHHHHHHHHH
Q psy6736 633 GERNVLIFDLGGGTFDVSILTIEDGIFEVKSTAGDTHLGGEDFDNRMVNHFVQEFKRKYKKDLTTNKRALRRLRTACERA 712 (1023)
Q Consensus 633 ~~~~vlV~D~GggT~dvsi~~~~~~~~~v~~~~gd~~lGG~~~D~~l~~~~~~~~~~~~~~~~~~~~~~~~~L~~~~e~~ 712 (1023)
++.+++|+|+||+|+|+.++. +..+ +...++....|-.++-+.|.+.+.+++. .+...+...+.. +.+.=
T Consensus 165 ~~~~~lVIDIG~~TtD~~~~~--~~~~-~~~~s~s~~~G~~~~~~~I~~~i~~~~g----~~~~~~~~~i~~---~l~~g 234 (320)
T TIGR03739 165 GKEQSLIIDPGYFTFDWLVAR--GMRL-VQKRSGSVNGGMSDIYRLLAAEISKDIG----TPAYRDIDRIDL---ALRTG 234 (320)
T ss_pred CcCcEEEEecCCCeeeeehcc--CCEE-cccccCCchhHHHHHHHHHHHHHHhhcC----CCCccCHHHHHH---HHHhC
Confidence 556799999999999998764 4444 4455555678988888888877766653 221011111111 11111
Q ss_pred hhhcCCCceeEEEEecccCCcceEEEecHHHHHHHHHHHHHHHHHHHHHHHHHcCCCccccceEEEecCccCcHHHHHHH
Q psy6736 713 KRTLSSSTQASIEIDSLFEGVDFYTSITRARFEELNADLFRGTMEPVEKSLRDAKMDKAQIHDIVLVGGSTRIPKVQKLL 792 (1023)
Q Consensus 713 K~~Ls~~~~~~~~i~~~~~~~~~~~~itr~~~~~~~~~~~~~~~~~i~~~l~~~~~~~~~i~~V~LvGG~srip~v~~~l 792 (1023)
|. +.+ .+. .+.|+ +.++ .....+++++..+.+.+. ...+++.|+|+||++. .+++.|
T Consensus 235 ~~---------~~~----~gk--~~di~-~~~~-~~~~~~~~~v~~i~~~~~----~~~~~~~Iil~GGGa~--ll~~~l 291 (320)
T TIGR03739 235 KQ---------PRI----YQK--PVDIK-RCLE-LAETVAQQAVSTMMTWIG----APESIQNIVLVGGGAF--LFKKAV 291 (320)
T ss_pred Cc---------eee----cce--ecCch-HHHH-HHHHHHHHHHHHHHHhcc----cCCcccEEEEeCCcHH--HHHHHH
Confidence 10 000 111 11222 1122 333334444333333331 1245889999999987 668999
Q ss_pred HHhhcCcccCCCCCCccceecchHHHH
Q psy6736 793 QDFFNGKELNKSINPDEAVAYGAAVQA 819 (1023)
Q Consensus 793 ~~~f~~~~~~~~~~p~~aVa~GAa~~a 819 (1023)
++.|+...+....||..|.|+|-..++
T Consensus 292 ~~~f~~~~i~~~~dp~~ANarG~~~~g 318 (320)
T TIGR03739 292 KAAFPKHRIVEVDEPMFANVRGFQIAG 318 (320)
T ss_pred HHHCCCCeeEecCCcHHHHHHHHHHhh
Confidence 999977655567899999999977665
No 88
>PF08841 DDR: Diol dehydratase reactivase ATPase-like domain; InterPro: IPR009191 Diol dehydratase (propanediol dehydratase) and glycerol dehydratase undergo concomitant, irreversible inactivation by glycerol during catalysis [, ]. This inactivation is mechanism-based and involves cleavage of the Co-C bond of the cobalamin cofactor, coenzyme B12 (AdoCbl), forming 5 -deoxyadenosine and a modified coenzyme []. Irreversible inactivation of the enzyme results from tight binding to the modified, inactive cobalamin [, ]. The glycerol-inactivated enzyme undergoes rapid reactivation in the presence of free AdoCbl, ATP, and Mg 2+ (or Mn 2+ ) []. Reactivation is mediated by a complex of two proteins: a large subunit (DdrA/PduG) and a small subunit (DdrB/PduH, IPR009192 from INTERPRO) [, ]. The two subunits of the reactivating factor for glycerol dehydratase have been shown to form a tight complex that serves to reactivate the glycerol-inactivated holoenzyme, as well as O2-inactivated holoenzyme in vitro []. It is believed that this reactivating factor replaces an enzyme-bound, adenine-lacking inactive cobalamin with a free, adenine-containing active cobalamin []. PduG and PduH, part of the propanediol utilization pdu operon, are believed to have a similar function in the reactivation of propanediol dehydratase. PduG was also proposed, on the basis of genetic tests, to be a cobalamin adenosyltransferase involved in the conversion of inactive cobalamin (B12) to AdoCbl []. However, this function has since been shown to belong to another protein, PduO (IPR009221 from INTERPRO, IPR012228 from INTERPRO) []. Please see IPR003207 from INTERPRO, IPR003208 from INTERPRO, IPR009204 from INTERPRO for more details on the propanediol utilization pathway and pdu operon, as well as on the glycerol breakdown pathway.; PDB: 1NBW_C 2D0P_C 2D0O_C.
Probab=97.95 E-value=0.00012 Score=75.75 Aligned_cols=190 Identities=18% Similarity=0.227 Sum_probs=98.6
Q ss_pred HHcCCceeeeecchHHHHHHhccccccCccccccCCCCCcEEEEEEeCCceEEEEEEEEeCCEEEEEEecCCCCccHHHH
Q psy6736 139 TIAGLNVLRIINEPTAAAIAYGLDKKVGSTAVEYNGSGERNVLIFDLGGGTFDVSILTIEDGIFEVKSTAGDTHLGGEDF 218 (1023)
Q Consensus 139 ~~AGl~~~~li~Ep~AAal~y~~~~~~~~~~~~~~~~~~~~vlV~D~GggT~dvsv~~~~~~~~~v~~~~~~~~lGG~~~ 218 (1023)
+..|.++.--=-|+.+|.+....... .+..+.|+|+||||||.|++.-.+.+. ..--+| .|+.+
T Consensus 106 ~~lgv~V~igGvEAemAi~GALTTPG-----------t~~PlaIlDmG~GSTDAsii~~~g~v~-~iHlAG----AG~mV 169 (332)
T PF08841_consen 106 EELGVPVEIGGVEAEMAILGALTTPG-----------TDKPLAILDMGGGSTDASIINRDGEVT-AIHLAG----AGNMV 169 (332)
T ss_dssp HHHTSEEEEECEHHHHHHHHHTTSTT-------------SSEEEEEE-SSEEEEEEE-TTS-EE-EEEEE-----SHHHH
T ss_pred HHHCCceEEccccHHHHHhcccCCCC-----------CCCCeEEEecCCCcccHHHhCCCCcEE-EEEecC----Cchhh
Confidence 45688887778899999887655443 456689999999999999998754433 222122 46666
Q ss_pred HHHHHHHHHHHHHhhhccCccccHHHHHHHHHHHHHHhHHcCCCCceEEE----------EecccC----------Ccee
Q psy6736 219 DNRMVNHFVQEFKRKYKKDLTTNKRALRRLRTACERAKRTLSSSTQASIE----------IDSLFE----------GVDF 278 (1023)
Q Consensus 219 D~~l~~~l~~~~~~~~~~~~~~~~~~~~~L~~~ae~~K~~Ls~~~~~~i~----------i~~~~~----------~~~~ 278 (1023)
+..|...| +.+ . +.-||.+|+---..-+..+. ++...+ ..+.
T Consensus 170 TmlI~sEL--------Gl~----d------~~lAE~IKkyPlaKVEslfhiR~EDGtv~Ffd~pl~p~~faRvvi~~~~~ 231 (332)
T PF08841_consen 170 TMLINSEL--------GLE----D------RELAEDIKKYPLAKVESLFHIRHEDGTVQFFDEPLDPDVFARVVILKEDG 231 (332)
T ss_dssp HHHHHHHC--------T-S-----------HHHHHHHHHS-EEEEECTTEEEETTS-EEE-SS---CCCTTSEEEECTTE
T ss_pred HHHHHHhh--------CCC----C------HHHHHHhhhcchhhhccceEEEecCCceEEecCCCChHHeeEEEEecCCc
Confidence 66654322 111 1 11466777642111110000 000000 0011
Q ss_pred EEEe----cHHHHHHHhHHHHHHH-HHHHHHHHHHcC--CCccCcCeEEEEcCCCCcHHHHHHHHHHcCC-------ccc
Q psy6736 279 YTSI----TRARFEELNADLFRGT-MEPVEKSLRDAK--MDKAQIHDIVLVGGSTRIPKVQKLLQDFFNG-------KEL 344 (1023)
Q Consensus 279 ~~~i----tr~~~e~~~~~~~~~i-~~~i~~~l~~~~--~~~~~i~~V~LvGG~sr~p~v~~~l~~~f~~-------~~i 344 (1023)
.+.| +-+++..+=...-++. ..-..++|+... -...+|+.|+|||||+.=.-|-+++.+.+.. -.+
T Consensus 232 lvPi~~~~~lEkir~vRr~AK~kVFVtNa~RaL~~vsPtgniR~i~fVVlVGGSALDFEIp~~vtdaLs~y~iVaGRgNI 311 (332)
T PF08841_consen 232 LVPIPGDLSLEKIRSVRREAKEKVFVTNALRALKQVSPTGNIRDIPFVVLVGGSALDFEIPQMVTDALSHYGIVAGRGNI 311 (332)
T ss_dssp EEEESSTS-HHHHHHHHHHHHHHHHHHHHHHHHCCCSTTSSCCC--EEEEESGGGGSSSHHHHHHHHHCTTT-EEEE--G
T ss_pred eeecCCCccHHHHHHHHHHhhhhhhHHHHHHHHHhcCCCCCcccCceEEEecCchhhhhhHHHHHHHHhhCcceeecccc
Confidence 2222 2233322222211111 222334444332 2245889999999999887777888777632 245
Q ss_pred cccCCCchhHHhHHHHHH
Q psy6736 345 NKSINPDEAVAYGAAVQA 362 (1023)
Q Consensus 345 ~~~~~pd~aVa~GAa~~a 362 (1023)
.-..-|..|||.|.++.-
T Consensus 312 rG~eGPRNAVATGLvlsy 329 (332)
T PF08841_consen 312 RGVEGPRNAVATGLVLSY 329 (332)
T ss_dssp GGTSTTSTHHHHHHHHHH
T ss_pred ccccCchHHHHHHHHHhh
Confidence 555679999999998743
No 89
>smart00268 ACTIN Actin. ACTIN subfamily of ACTIN/mreB/sugarkinase/Hsp70 superfamily
Probab=97.95 E-value=1.4e-05 Score=92.00 Aligned_cols=169 Identities=22% Similarity=0.314 Sum_probs=99.3
Q ss_pred cceEEEEEeCCceEEEEEEEEeCCEEEEEEecCCCCCcHHHHHHHHHHHHHHHHHhhhccCcchhHHHHHHHHHHHHHHh
Q psy6736 634 ERNVLIFDLGGGTFDVSILTIEDGIFEVKSTAGDTHLGGEDFDNRMVNHFVQEFKRKYKKDLTTNKRALRRLRTACERAK 713 (1023)
Q Consensus 634 ~~~vlV~D~GggT~dvsi~~~~~~~~~v~~~~gd~~lGG~~~D~~l~~~~~~~~~~~~~~~~~~~~~~~~~L~~~~e~~K 713 (1023)
..+-||+|+|+++++++.+. +|..- ........+||+++|+.|.+++...-. .+ ... .-...++.+|
T Consensus 142 ~~~~lVVDiG~~~t~v~pv~--~G~~~-~~~~~~~~~GG~~l~~~l~~~l~~~~~-~~--~~~-------~~~~~~~~iK 208 (373)
T smart00268 142 RTTGLVIDSGDGVTHVVPVV--DGYVL-PHAIKRIDIAGRDLTDYLKELLSERGY-QF--NSS-------AEFEIVREIK 208 (373)
T ss_pred CCEEEEEecCCCcceEEEEE--CCEEc-hhhheeccCcHHHHHHHHHHHHHhcCC-CC--CcH-------HHHHHHHHhh
Confidence 45799999999999999877 44332 222223579999999999988765110 01 111 1122344455
Q ss_pred hhcCCC-------------------ceeEEEEecccCCcceEEEecHHHHHHHHHHHH---------HHHHHHHHHHHHH
Q psy6736 714 RTLSSS-------------------TQASIEIDSLFEGVDFYTSITRARFEELNADLF---------RGTMEPVEKSLRD 765 (1023)
Q Consensus 714 ~~Ls~~-------------------~~~~~~i~~~~~~~~~~~~itr~~~~~~~~~~~---------~~~~~~i~~~l~~ 765 (1023)
+.+..- ....+. +.++.. +.+..+.| .+.+.+| ..+.+.|.++|..
T Consensus 209 e~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~---lpdg~~--~~~~~er~-~~~E~lf~p~~~~~~~~~i~~~i~~~i~~ 282 (373)
T smart00268 209 EKLCYVAEDFEKEMKKARESSESSKLEKTYE---LPDGNT--IKVGNERF-RIPEILFKPELIGLEQKGIHELVYESIQK 282 (373)
T ss_pred hheeeecCChHHHHHHhhhcccccccceeEE---CCCCCE--EEEChHHe-eCchhcCCchhcCCCcCCHHHHHHHHHHh
Confidence 443211 001111 123332 33333332 2333333 3567777777776
Q ss_pred cCCC--ccccceEEEecCccCcHHHHHHHHHhhcC-------cccCCCCCCccceecchHHHHHH
Q psy6736 766 AKMD--KAQIHDIVLVGGSTRIPKVQKLLQDFFNG-------KELNKSINPDEAVAYGAAVQAAI 821 (1023)
Q Consensus 766 ~~~~--~~~i~~V~LvGG~srip~v~~~l~~~f~~-------~~~~~~~~p~~aVa~GAa~~a~~ 821 (1023)
+..+ ..=.+.|+|+||+|++|.+.+.|.+.+.. ..+....++..++=+||+++|..
T Consensus 283 ~~~d~r~~l~~nIvltGG~s~i~Gl~~RL~~el~~~~p~~~~v~v~~~~~~~~~~W~G~silas~ 347 (373)
T smart00268 283 CDIDVRKDLYENIVLSGGSTLIPGFGERLEKELKQLAPKKLKVKVIAPPERKYSVWLGGSILASL 347 (373)
T ss_pred CCHhHHHHHHhCeEeecccccCcCHHHHHHHHHHHhCCCCceeEEecCCCCccceEeCcccccCc
Confidence 5322 12246799999999999999999887621 12334456677888999988854
No 90
>PF06406 StbA: StbA protein; InterPro: IPR009440 This entry represents bacterial plasmid segregation proteins ParM and StbA []. They are involved in the control of plasmid partition and required for the accurate segregation of the plasmid. ; PDB: 3IKY_C 3IKU_I 2ZGZ_B 1MWM_A 1MWK_A 2ZHC_A 2ZGY_A 2QU4_A.
Probab=97.86 E-value=6.6e-05 Score=83.85 Aligned_cols=155 Identities=19% Similarity=0.313 Sum_probs=82.3
Q ss_pred CCCcceEEEEEeCCceEEEEEEEEeCCEEEEEEecCCCCCcHHHHHHHHHHHHHHHHHhhhccCcchhHHHHHHHHHHHH
Q psy6736 631 GSGERNVLIFDLGGGTFDVSILTIEDGIFEVKSTAGDTHLGGEDFDNRMVNHFVQEFKRKYKKDLTTNKRALRRLRTACE 710 (1023)
Q Consensus 631 ~~~~~~vlV~D~GggT~dvsi~~~~~~~~~v~~~~gd~~lGG~~~D~~l~~~~~~~~~~~~~~~~~~~~~~~~~L~~~~e 710 (1023)
+.+...+||+|+||+|+|++++. ++.-.+....+...+|-.++-.++.+.+... . .. .+.....++.....
T Consensus 160 ~~~~~~~lVVDIGG~T~Dv~~v~--~~~~~~~~~~~~~~~Gvs~~~~~I~~~l~~~-~----~~--~s~~~~~~ii~~~~ 230 (318)
T PF06406_consen 160 LDEDESVLVVDIGGRTTDVAVVR--GGLPDISKCSGTPEIGVSDLYDAIAQALRSA-G----ID--TSELQIDDIIRNRK 230 (318)
T ss_dssp S-TTSEEEEEEE-SS-EEEEEEE--GGG--EEEEEEETTSSTHHHHHHHHHHTT---S----BH--HHHHHHHHHHHTTT
T ss_pred hcccCcEEEEEcCCCeEEeeeec--CCccccchhccCCchhHHHHHHHHHHHHHHh-c----CC--CcHHHHHHHHHhhh
Confidence 44556799999999999999886 3322333445556789988888887766551 1 10 01111111111000
Q ss_pred HHhhhcCCCceeEEEEecccCCcceEEEecHHHHHHHHHHHHHHHHHHHHHHHHHcCCCccccceEEEecCccCcHHHHH
Q psy6736 711 RAKRTLSSSTQASIEIDSLFEGVDFYTSITRARFEELNADLFRGTMEPVEKSLRDAKMDKAQIHDIVLVGGSTRIPKVQK 790 (1023)
Q Consensus 711 ~~K~~Ls~~~~~~~~i~~~~~~~~~~~~itr~~~~~~~~~~~~~~~~~i~~~l~~~~~~~~~i~~V~LvGG~srip~v~~ 790 (1023)
-+..++. .....+ -.+++.+.++..++++.+.|.+.+.+ ..+++.|+||||++. .+.+
T Consensus 231 -~~~~~~~----------~i~~~~-----~~~~v~~~i~~~~~~l~~~i~~~~~~----~~~~~~I~~vGGGA~--ll~~ 288 (318)
T PF06406_consen 231 -DKGYLRQ----------VINDED-----VIDDVSEVIEEAVEELINRILRELGD----FSDIDRIFFVGGGAI--LLKD 288 (318)
T ss_dssp --HHHHHH----------HSSSHH-----HHHHHHHHHHHHHHHHHHHHHHHHTT----S-S-SEEEEESTTHH--HHHH
T ss_pred -ccceecc----------cccchh-----hHHHHHHHHHHHHHHHHHHHHHHHhh----hccCCeEEEECCcHH--HHHH
Confidence 0000000 000000 12344444444555555545444432 346789999999975 6788
Q ss_pred HHHHhhc--CcccCCCCCCccceecchH
Q psy6736 791 LLQDFFN--GKELNKSINPDEAVAYGAA 816 (1023)
Q Consensus 791 ~l~~~f~--~~~~~~~~~p~~aVa~GAa 816 (1023)
.|++.|+ ...+...-||+.|-|+|-+
T Consensus 289 ~Ik~~~~~~~~~i~i~~~pqfAnv~G~~ 316 (318)
T PF06406_consen 289 AIKEAFPVPNERIVIVDDPQFANVRGFY 316 (318)
T ss_dssp HHHHHHT--GGGEE--SSGGGHHHHHHH
T ss_pred HHHHhhCCCCCcEEECCCchhhHHHHHh
Confidence 9999885 3466778899999999854
No 91
>TIGR00241 CoA_E_activ CoA-substrate-specific enzyme activase, putative. This domain may be involved in generating or regenerating the active sites of enzymes related to (R)-2-hydroxyglutaryl-CoA dehydratase and benzoyl-CoA reductase.
Probab=97.70 E-value=9.8e-05 Score=79.52 Aligned_cols=152 Identities=22% Similarity=0.316 Sum_probs=89.5
Q ss_pred EEEEeCCceEEEEEEEEeCCEEEEEEecCCCCCcHHHHHHHHHHHHHHHHHhhhccCcchhHHHHHHHHHHHHHHhhhcC
Q psy6736 638 LIFDLGGGTFDVSILTIEDGIFEVKSTAGDTHLGGEDFDNRMVNHFVQEFKRKYKKDLTTNKRALRRLRTACERAKRTLS 717 (1023)
Q Consensus 638 lV~D~GggT~dvsi~~~~~~~~~v~~~~gd~~lGG~~~D~~l~~~~~~~~~~~~~~~~~~~~~~~~~L~~~~e~~K~~Ls 717 (1023)
.|+|+||..+-+..+. ++.+.-.........|+..|.+.+++.+- .++ ..+..+ +.+.+....
T Consensus 94 ~vidiGgqd~k~i~~~--~g~~~~~~~n~~ca~Gtg~f~e~~a~~l~--------~~~----~e~~~~---~~~~~~~~~ 156 (248)
T TIGR00241 94 GVIDIGGQDSKVIKID--DGKVDDFTMNDKCAAGTGRFLEVTARRLG--------VSV----EELGSL---AEKADRKAK 156 (248)
T ss_pred EEEEecCCeeEEEEEC--CCcEeeeeecCcccccccHHHHHHHHHcC--------CCH----HHHHHH---HhcCCCCCC
Confidence 4999999977766665 66554444555566788888877775432 211 111111 111111100
Q ss_pred CCceeEEEEe-cccCCcceEEEecHHHHHHHHHHHHHHHHHHHHHHHHHcCCCccccc-eEEEecCccCcHHHHHHHHHh
Q psy6736 718 SSTQASIEID-SLFEGVDFYTSITRARFEELNADLFRGTMEPVEKSLRDAKMDKAQIH-DIVLVGGSTRIPKVQKLLQDF 795 (1023)
Q Consensus 718 ~~~~~~~~i~-~~~~~~~~~~~itr~~~~~~~~~~~~~~~~~i~~~l~~~~~~~~~i~-~V~LvGG~srip~v~~~l~~~ 795 (1023)
-+....+-.+ .+.... ....++ ++++..+++.+...+.+.+...+ ++ .|+|.||.++.|.+.+.+++.
T Consensus 157 ~~~~c~vf~~s~vi~~l--~~g~~~---~di~~~~~~~va~~i~~~~~~~~-----~~~~Vvl~GGva~n~~l~~~l~~~ 226 (248)
T TIGR00241 157 ISSMCTVFAESELISLL--AAGVKK---EDILAGVYESIAERVAEMLQRLK-----IEAPIVFTGGVSKNKGLVKALEKK 226 (248)
T ss_pred cCCEeEEEechhHHHHH--HCCCCH---HHHHHHHHHHHHHHHHHHHhhcC-----CCCCEEEECccccCHHHHHHHHHH
Confidence 0111111110 000000 001222 45666666666666666655433 44 799999999999999999999
Q ss_pred hcCcccCCCCCCccceecchHH
Q psy6736 796 FNGKELNKSINPDEAVAYGAAV 817 (1023)
Q Consensus 796 f~~~~~~~~~~p~~aVa~GAa~ 817 (1023)
+ +.++..+.+|..+.|+|||+
T Consensus 227 l-g~~v~~~~~~~~~~AlGaAl 247 (248)
T TIGR00241 227 L-GMKVITPPEPQIVGAVGAAL 247 (248)
T ss_pred h-CCcEEcCCCccHHHHHHHHh
Confidence 9 67788888999999999997
No 92
>COG5277 Actin and related proteins [Cytoskeleton]
Probab=97.65 E-value=0.0018 Score=74.80 Aligned_cols=97 Identities=12% Similarity=0.072 Sum_probs=72.2
Q ss_pred CcceEecCCCCCHHHHHHHHH-HHHHcCCceeeeecchHHHHHHhccccccCccccccCCCCCcEEEEEEeCCceEEEEE
Q psy6736 116 GQNEGLIPAYFNISSVKSTKD-SGTIAGLNVLRIINEPTAAAIAYGLDKKVGSTAVEYNGSGERNVLIFDLGGGTFDVSI 194 (1023)
Q Consensus 116 ~~~vitVPa~~~~~qr~~l~~-Aa~~AGl~~~~li~Ep~AAal~y~~~~~~~~~~~~~~~~~~~~vlV~D~GggT~dvsv 194 (1023)
..+++|-|..+...+|..+.+ ..+...+..+.+..++.+++++.+.. ..+.+|+|+|.+.|+++-
T Consensus 107 ~pllltep~~n~~~~re~~~e~~fE~~~vp~~~~~~~~~l~~ya~g~~--------------~~~g~ViD~G~~~t~v~P 172 (444)
T COG5277 107 HPLLLTEPPLNPPSNREKITELLFETLNVPALYLAIQAVLSLYASGSS--------------DETGLVIDSGDSVTHVIP 172 (444)
T ss_pred CceEEeccCCCcHHHHHHHHHHHHHhcCCcceEeeHHHHHHHHhcCCC--------------CCceEEEEcCCCceeeEe
Confidence 468999999999999877644 45777888888888888887766532 136799999999999887
Q ss_pred EEEeCCEEEEEEecCCCCccHHHHHHHHHHHHHHH
Q psy6736 195 LTIEDGIFEVKSTAGDTHLGGEDFDNRMVNHFVQE 229 (1023)
Q Consensus 195 ~~~~~~~~~v~~~~~~~~lGG~~~D~~l~~~l~~~ 229 (1023)
+--+-. +.....-..+||++++..|.+.|...
T Consensus 173 V~DG~~---l~~a~~ri~~gG~~it~~l~~lL~~~ 204 (444)
T COG5277 173 VVDGIV---LPKAVKRIDIGGRDITDYLKKLLREK 204 (444)
T ss_pred eecccc---ccccceeeecCcHHHHHHHHHHHhhc
Confidence 653221 11112236799999999998888774
No 93
>PTZ00280 Actin-related protein 3; Provisional
Probab=97.64 E-value=0.00029 Score=82.02 Aligned_cols=151 Identities=19% Similarity=0.194 Sum_probs=89.1
Q ss_pred cceEEEEEeCCceEEEEEEEEeCCEEEEEEecCCCCCcHHHHHHHHHHHHHHHHHhhhccCcchhHHHHHHHHHHHHHHh
Q psy6736 634 ERNVLIFDLGGGTFDVSILTIEDGIFEVKSTAGDTHLGGEDFDNRMVNHFVQEFKRKYKKDLTTNKRALRRLRTACERAK 713 (1023)
Q Consensus 634 ~~~vlV~D~GggT~dvsi~~~~~~~~~v~~~~gd~~lGG~~~D~~l~~~~~~~~~~~~~~~~~~~~~~~~~L~~~~e~~K 713 (1023)
..+-||+|+|.|+++++-+. +|..--.+. .-..+||.++|+.|.++|.+.. ..+... ..+..++.+|
T Consensus 159 ~~tglVVDiG~~~T~i~PV~--~G~~l~~~~-~~~~~GG~~lt~~L~~lL~~~~-----~~~~~~-----~~~~~~~~iK 225 (414)
T PTZ00280 159 TLTGTVIDSGDGVTHVIPVV--DGYVIGSSI-KHIPLAGRDITNFIQQMLRERG-----EPIPAE-----DILLLAQRIK 225 (414)
T ss_pred ceeEEEEECCCCceEEEEEE--CCEEcccce-EEecCcHHHHHHHHHHHHHHcC-----CCCCcH-----HHHHHHHHHH
Confidence 34569999999999998765 443322222 2257999999999999875431 111111 0112355556
Q ss_pred hhcCCCc-----------------eeEEEEecccCCcceEEEecHHHHHH---HHHHHH------HHHHHHHHHHHHHcC
Q psy6736 714 RTLSSST-----------------QASIEIDSLFEGVDFYTSITRARFEE---LNADLF------RGTMEPVEKSLRDAK 767 (1023)
Q Consensus 714 ~~Ls~~~-----------------~~~~~i~~~~~~~~~~~~itr~~~~~---~~~~~~------~~~~~~i~~~l~~~~ 767 (1023)
+.++.-. ...+..++...+....+.|..+.|.- ++.|-+ ..+.+.|.+.|.++.
T Consensus 226 e~~c~v~~d~~~e~~~~~~~~~~~~~~~~~~d~~~g~~~~i~l~~erf~~~E~LF~P~~~~~~~~~gl~e~i~~sI~~~~ 305 (414)
T PTZ00280 226 EKYCYVAPDIAKEFEKYDSDPKNHFKKYTAVNSVTKKPYTVDVGYERFLGPEMFFHPEIFSSEWTTPLPEVVDDAIQSCP 305 (414)
T ss_pred HhcCcccCcHHHHHHHhhcCcccccceEECCCCCCCCccEEEechHHhcCcccccChhhcCCccCCCHHHHHHHHHHhCC
Confidence 6543210 01122222222344567777776653 233311 145567777777654
Q ss_pred CC--ccccceEEEecCccCcHHHHHHHHHhhc
Q psy6736 768 MD--KAQIHDIVLVGGSTRIPKVQKLLQDFFN 797 (1023)
Q Consensus 768 ~~--~~~i~~V~LvGG~srip~v~~~l~~~f~ 797 (1023)
.+ ..=.+.|+|+||+|.+|.+.+.|++.+.
T Consensus 306 ~d~r~~L~~nIvL~GG~s~~~Gf~eRL~~El~ 337 (414)
T PTZ00280 306 IDCRRPLYKNIVLSGGSTMFKGFDKRLQRDVR 337 (414)
T ss_pred hhhHHHHhhcEEEeCCcccCcCHHHHHHHHHH
Confidence 32 2234679999999999999999998773
No 94
>PF00022 Actin: Actin; InterPro: IPR004000 Actin [, ] is a ubiquitous protein involved in the formation of filaments that are major components of the cytoskeleton. These filaments interact with myosin to produce a sliding effect, which is the basis of muscular contraction and many aspects of cell motility, including cytokinesis. Each actin protomer binds one molecule of ATP and has one high affinity site for either calcium or magnesium ions, as well as several low affinity sites. Actin exists as a monomer in low salt concentrations, but filaments form rapidly as salt concentration rises, with the consequent hydrolysis of ATP. Actin from many sources forms a tight complex with deoxyribonuclease (DNase I) although the significance of this is still unknown. The formation of this complex results in the inhibition of DNase I activity, and actin loses its ability to polymerise. It has been shown that an ATPase domain of actin shares similarity with ATPase domains of hexokinase and hsp70 proteins [, ]. In vertebrates there are three groups of actin isoforms: alpha, beta and gamma. The alpha actins are found in muscle tissues and are a major constituent of the contractile apparatus. The beta and gamma actins co-exists in most cell types as components of the cytoskeleton and as mediators of internal cell motility. In plants there are many isoforms which are probably involved in a variety of functions such as cytoplasmic streaming, cell shape determination, tip growth, graviperception, cell wall deposition, etc. Recently some divergent actin-like proteins have been identified in several species. These proteins include centractin (actin-RPV) from mammals, fungi yeast ACT5, Neurospora crassa ro-4) and Pneumocystis carinii, which seems to be a component of a multi-subunit centrosomal complex involved in microtubule based vesicle motility (this subfamily is known as ARP1); ARP2 subfamily, which includes chicken ACTL, Saccharomyces cerevisiae ACT2, Drosophila melanogaster 14D and Caenorhabditis elegans actC; ARP3 subfamily, which includes actin 2 from mammals, Drosophila 66B, yeast ACT4 and Schizosaccharomyces pombe act2; and ARP4 subfamily, which includes yeast ACT3 and Drosophila 13E.; PDB: 2OAN_B 1HLU_A 2BTF_A 3UB5_A 3U4L_A 4EFH_A 1YVN_A 1YAG_A 1D4X_A 1MDU_B ....
Probab=97.63 E-value=0.00015 Score=84.09 Aligned_cols=177 Identities=20% Similarity=0.354 Sum_probs=100.9
Q ss_pred eEEEEEeCCceEEEEEEEEeCCEEEEEEecCCCCCcHHHHHHHHHHHHHHH-HHh--hhc-----------cCcchhHHH
Q psy6736 636 NVLIFDLGGGTFDVSILTIEDGIFEVKSTAGDTHLGGEDFDNRMVNHFVQE-FKR--KYK-----------KDLTTNKRA 701 (1023)
Q Consensus 636 ~vlV~D~GggT~dvsi~~~~~~~~~v~~~~gd~~lGG~~~D~~l~~~~~~~-~~~--~~~-----------~~~~~~~~~ 701 (1023)
+-||+|+|.+.+.|+-+. +|.. +........+||.++++.|.+.+.++ +.- .+. .........
T Consensus 143 tglVVD~G~~~t~v~pV~--dG~~-~~~~~~~~~~GG~~lt~~l~~lL~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 219 (393)
T PF00022_consen 143 TGLVVDIGYSSTSVVPVV--DGYV-LPHSIKRSPIGGDDLTEYLKELLKERNIQINPSYLIKSKSPVEGESYNNSDDEEI 219 (393)
T ss_dssp SEEEEEESSS-EEEEEEE--TTEE--GGGBEEES-SHHHHHHHHHHHHHHT-SS--GCCCCCCHCCC-TCHHSSHHHHHH
T ss_pred cccccccceeeeeeeeee--eccc-cccccccccccHHHHHHHHHHHHHhhccccccccccccccccccccccchhhhcc
Confidence 579999999999887764 5543 11122225689999999999888874 110 000 000111222
Q ss_pred HHHHHHHHHHHhhhc--------CCCceeEEEEecccCCcceEEEecHHHHHHHHHHHHH----------------HHHH
Q psy6736 702 LRRLRTACERAKRTL--------SSSTQASIEIDSLFEGVDFYTSITRARFEELNADLFR----------------GTME 757 (1023)
Q Consensus 702 ~~~L~~~~e~~K~~L--------s~~~~~~~~i~~~~~~~~~~~~itr~~~~~~~~~~~~----------------~~~~ 757 (1023)
...+++.+..+.... +......+.++ ++. .+.+..+.| .+.+.+|+ .+.+
T Consensus 220 ~~~ik~~~~~v~~~~~~~~~~~~~~~~~~~~~lP---dg~--~i~~~~er~-~~~E~LF~p~~~~~~~~~~~~~~~gL~~ 293 (393)
T PF00022_consen 220 VEEIKEECCYVSEDPDEEQEEQASENPEKSYELP---DGQ--TIILGKERF-RIPEILFNPSLIGIDSASEPSEFMGLPE 293 (393)
T ss_dssp HHHHHHHHHSGGSSHHHHHHHHHCSTTTEEEE-T---TSS--EEEESTHHH-HHHHTTTSGGGGTSSSTS---SSSCHHH
T ss_pred chhccchhhhcccccccccccccccccceecccc---ccc--ccccccccc-cccccccccccccccccccccccchhhh
Confidence 222332222111111 11222333332 333 556666655 34455544 4667
Q ss_pred HHHHHHHHcCCCc--cccceEEEecCccCcHHHHHHHHHhhcC-------cccCCCC-CCccceecchHHHHHH
Q psy6736 758 PVEKSLRDAKMDK--AQIHDIVLVGGSTRIPKVQKLLQDFFNG-------KELNKSI-NPDEAVAYGAAVQAAI 821 (1023)
Q Consensus 758 ~i~~~l~~~~~~~--~~i~~V~LvGG~srip~v~~~l~~~f~~-------~~~~~~~-~p~~aVa~GAa~~a~~ 821 (1023)
.|.+++..+..+. .-.+.|+|+||+|++|.+.+.|.+.+.. .++.... +|..++=+||+++|..
T Consensus 294 ~I~~si~~~~~d~r~~l~~nIvl~GG~S~i~G~~eRL~~eL~~~~~~~~~~~v~~~~~~~~~~aW~Ggsilasl 367 (393)
T PF00022_consen 294 LILDSISKCPIDLRKELLSNIVLTGGSSLIPGFKERLQQELRSLLPSSTKVKVIAPPSDRQFAAWIGGSILASL 367 (393)
T ss_dssp HHHHHHHTSTTTTHHHHHTTEEEESGGGGSTTHHHHHHHHHHHHSGTTSTEEEE--T-TTTSHHHHHHHHHHTS
T ss_pred hhhhhhhccccccccccccceEEecccccccchHHHHHHHhhhhhhccccceeccCchhhhhcccccceeeecc
Confidence 7888887665332 2247899999999999999999887632 2333444 7889999999999853
No 95
>COG4820 EutJ Ethanolamine utilization protein, possible chaperonin [Amino acid transport and metabolism]
Probab=97.58 E-value=7.1e-05 Score=73.28 Aligned_cols=129 Identities=24% Similarity=0.361 Sum_probs=89.5
Q ss_pred EEEEEeCCceEEEEEEEEeCCEEEEEEecCCCCCcHHHHHHHHHHHHHHHHHhhhccCcchhHHHHHHHHHHHHHHhhhc
Q psy6736 637 VLIFDLGGGTFDVSILTIEDGIFEVKSTAGDTHLGGEDFDNRMVNHFVQEFKRKYKKDLTTNKRALRRLRTACERAKRTL 716 (1023)
Q Consensus 637 vlV~D~GggT~dvsi~~~~~~~~~v~~~~gd~~lGG~~~D~~l~~~~~~~~~~~~~~~~~~~~~~~~~L~~~~e~~K~~L 716 (1023)
-.|+|+||||+-+||++ +|. |..+ -|..-||..+...|+- .|++++ ++||..|..-
T Consensus 142 g~VVDiGGGTTGIsi~k--kGk--Viy~-ADEpTGGtHmtLvlAG--------~ygi~~-----------EeAE~~Kr~~ 197 (277)
T COG4820 142 GGVVDIGGGTTGISIVK--KGK--VIYS-ADEPTGGTHMTLVLAG--------NYGISL-----------EEAEQYKRGH 197 (277)
T ss_pred CcEEEeCCCcceeEEEE--cCc--EEEe-ccCCCCceeEEEEEec--------ccCcCH-----------hHHHHhhhcc
Confidence 56899999999999998 443 3322 2466788777655542 223322 3556666542
Q ss_pred CCCceeEEEEecccCCcceEEEecHHHHHHHHHHHHHHHHHHHHHHHHHcCCCccccceEEEecCccCcHHHHHHHHHhh
Q psy6736 717 SSSTQASIEIDSLFEGVDFYTSITRARFEELNADLFRGTMEPVEKSLRDAKMDKAQIHDIVLVGGSTRIPKVQKLLQDFF 796 (1023)
Q Consensus 717 s~~~~~~~~i~~~~~~~~~~~~itr~~~~~~~~~~~~~~~~~i~~~l~~~~~~~~~i~~V~LvGG~srip~v~~~l~~~f 796 (1023)
-... |.-..++|.++++.+.+.+-++..+ +..+.|+||+|.-|.+.+..++.|
T Consensus 198 k~~~----------------------Eif~~v~PV~eKMAeIv~~hie~~~-----i~dl~lvGGac~~~g~e~~Fe~~l 250 (277)
T COG4820 198 KKGE----------------------EIFPVVKPVYEKMAEIVARHIEGQG-----ITDLWLVGGACMQPGVEELFEKQL 250 (277)
T ss_pred ccch----------------------hcccchhHHHHHHHHHHHHHhccCC-----CcceEEecccccCccHHHHHHHHh
Confidence 1111 1112356888999999998888665 467999999999999999999999
Q ss_pred cCcccCCCCCCccceecchHH
Q psy6736 797 NGKELNKSINPDEAVAYGAAV 817 (1023)
Q Consensus 797 ~~~~~~~~~~p~~aVa~GAa~ 817 (1023)
..++..+..|....-.|-|+
T Consensus 251 -~l~v~~P~~p~y~TPLgIA~ 270 (277)
T COG4820 251 -ALQVHLPQHPLYMTPLGIAS 270 (277)
T ss_pred -ccccccCCCcceechhhhhh
Confidence 77888888887776666654
No 96
>TIGR03192 benz_CoA_bzdQ benzoyl-CoA reductase, bzd-type, Q subunit. Members of this family are the Q subunit of one of two related types of four-subunit ATP-dependent benzoyl-CoA reductase. This enzyme system catalyzes the dearomatization of benzoyl-CoA, a common intermediate in pathways for the degradation for a number of different aromatic compounds, such as phenol and toluene.
Probab=97.55 E-value=0.0043 Score=66.88 Aligned_cols=70 Identities=23% Similarity=0.286 Sum_probs=51.0
Q ss_pred HhHHHHHHHHHHHHHHHHHcCCCccCcCeEEEEcCCCCcHHHHHHHHHHcCCcccc-ccCCCchhHHhHHHHHHHH
Q psy6736 290 LNADLFRGTMEPVEKSLRDAKMDKAQIHDIVLVGGSTRIPKVQKLLQDFFNGKELN-KSINPDEAVAYGAAVQAAI 364 (1023)
Q Consensus 290 ~~~~~~~~i~~~i~~~l~~~~~~~~~i~~V~LvGG~sr~p~v~~~l~~~f~~~~i~-~~~~pd~aVa~GAa~~a~~ 364 (1023)
++..+...+...+...++..++. +.|+|+||.++.|.+++.+++.+ +.++. .+.+|..+-|.|||++|..
T Consensus 218 I~aGl~~sia~rv~~~~~~~~i~----~~v~~~GGva~N~~l~~al~~~L-g~~v~~~p~~p~~~GAlGAAL~A~~ 288 (293)
T TIGR03192 218 VIAAYCQAMAERVVSLLERIGVE----EGFFITGGIAKNPGVVKRIERIL-GIKAVDTKIDSQIAGALGAALFGYT 288 (293)
T ss_pred HHHHHHHHHHHHHHHHhcccCCC----CCEEEECcccccHHHHHHHHHHh-CCCceeCCCCccHHHHHHHHHHHHH
Confidence 34444444444444444433322 45999999999999999999999 56665 5778999999999999864
No 97
>PTZ00281 actin; Provisional
Probab=97.37 E-value=0.00074 Score=77.45 Aligned_cols=167 Identities=21% Similarity=0.307 Sum_probs=96.7
Q ss_pred ceEEEEEeCCceEEEEEEEEeCCEEEEEEecCCCCCcHHHHHHHHHHHHHHHHHhhhccCcchhHHHHHHHHHHHHHHhh
Q psy6736 635 RNVLIFDLGGGTFDVSILTIEDGIFEVKSTAGDTHLGGEDFDNRMVNHFVQEFKRKYKKDLTTNKRALRRLRTACERAKR 714 (1023)
Q Consensus 635 ~~vlV~D~GggT~dvsi~~~~~~~~~v~~~~gd~~lGG~~~D~~l~~~~~~~~~~~~~~~~~~~~~~~~~L~~~~e~~K~ 714 (1023)
.+-||+|+|.+.+.++-+. +|.. +........+||.++++.|.+.|...- +......+ +..++.+|+
T Consensus 149 ~tglVVDiG~~~t~v~PV~--dG~~-~~~~~~~~~~GG~~lt~~L~~lL~~~~---~~~~~~~~-------~~~~~~iKe 215 (376)
T PTZ00281 149 TTGIVMDSGDGVSHTVPIY--EGYA-LPHAILRLDLAGRDLTDYMMKILTERG---YSFTTTAE-------REIVRDIKE 215 (376)
T ss_pred ceEEEEECCCceEEEEEEE--eccc-chhheeeccCcHHHHHHHHHHHHHhcC---CCCCcHHH-------HHHHHHHHH
Confidence 4689999999999887544 3322 222222357999999999988775431 11101111 122444555
Q ss_pred hcCCCc----------------eeEEEEecccCCcceEEEecHHHHHHHHHHHHH---------HHHHHHHHHHHHcCCC
Q psy6736 715 TLSSST----------------QASIEIDSLFEGVDFYTSITRARFEELNADLFR---------GTMEPVEKSLRDAKMD 769 (1023)
Q Consensus 715 ~Ls~~~----------------~~~~~i~~~~~~~~~~~~itr~~~~~~~~~~~~---------~~~~~i~~~l~~~~~~ 769 (1023)
.++.-. ..... +.+|. .+.+..+.| ...+.+|+ .+.+.|.+++..+..+
T Consensus 216 ~~c~v~~d~~~~~~~~~~~~~~~~~y~---LPdg~--~i~i~~er~-~~~E~LF~P~~~~~~~~gi~~~i~~sI~~~~~d 289 (376)
T PTZ00281 216 KLAYVALDFEAEMQTAASSSALEKSYE---LPDGQ--VITIGNERF-RCPEALFQPSFLGMESAGIHETTYNSIMKCDVD 289 (376)
T ss_pred hcEEecCCchHHHHhhhcCcccceeEE---CCCCC--EEEeeHHHe-eCcccccChhhcCCCCCCHHHHHHHHHHhCChh
Confidence 542100 01112 22333 345555544 22333443 3556666666655322
Q ss_pred c--cccceEEEecCccCcHHHHHHHHHhhcC-------cccCCCCCCccceecchHHHHH
Q psy6736 770 K--AQIHDIVLVGGSTRIPKVQKLLQDFFNG-------KELNKSINPDEAVAYGAAVQAA 820 (1023)
Q Consensus 770 ~--~~i~~V~LvGG~srip~v~~~l~~~f~~-------~~~~~~~~p~~aVa~GAa~~a~ 820 (1023)
. .=.+.|+|+||+|.+|.+.++|+..+.. .++..+.++..++=+||+++|.
T Consensus 290 ~r~~L~~nIvl~GG~s~~~Gf~~RL~~El~~~~p~~~~v~v~~~~~r~~~aW~Ggsilas 349 (376)
T PTZ00281 290 IRKDLYGNVVLSGGTTMFPGIADRMNKELTALAPSTMKIKIIAPPERKYSVWIGGSILAS 349 (376)
T ss_pred HHHHHHhhccccCccccCcCHHHHHHHHHHHhCCCCcceEEecCCCCceeEEECcccccC
Confidence 1 2246799999999999999998876621 1234445777899999999985
No 98
>PTZ00452 actin; Provisional
Probab=97.36 E-value=0.00075 Score=77.23 Aligned_cols=167 Identities=17% Similarity=0.253 Sum_probs=96.5
Q ss_pred ceEEEEEeCCceEEEEEEEEeCCEEEEEEecCCCCCcHHHHHHHHHHHHHHHHHhhhccCcchhHHHHHHHHHHHHHHhh
Q psy6736 635 RNVLIFDLGGGTFDVSILTIEDGIFEVKSTAGDTHLGGEDFDNRMVNHFVQEFKRKYKKDLTTNKRALRRLRTACERAKR 714 (1023)
Q Consensus 635 ~~vlV~D~GggT~dvsi~~~~~~~~~v~~~~gd~~lGG~~~D~~l~~~~~~~~~~~~~~~~~~~~~~~~~L~~~~e~~K~ 714 (1023)
.+-||+|+|.|.++++-+. +|..--.+. ....+||.++++.|.+.|.+. .+......... .++.+|+
T Consensus 148 ~tglVVDiG~~~t~v~PV~--dG~~l~~~~-~r~~~gG~~lt~~L~~lL~~~---~~~~~~~~~~~-------~~~~iKe 214 (375)
T PTZ00452 148 TIGLVVDSGEGVTHCVPVF--EGHQIPQAI-TKINLAGRLCTDYLTQILQEL---GYSLTEPHQRI-------IVKNIKE 214 (375)
T ss_pred ceeeeecCCCCcceEEEEE--CCEEeccce-EEeeccchHHHHHHHHHHHhc---CCCCCCHHHHH-------HHHHHHH
Confidence 4679999999999987665 553322222 225699999999988876432 11111001111 1333444
Q ss_pred hcCCC----------------ceeEEEEecccCCcceEEEecHHHHHHHHHHHHH---------HHHHHHHHHHHHcCCC
Q psy6736 715 TLSSS----------------TQASIEIDSLFEGVDFYTSITRARFEELNADLFR---------GTMEPVEKSLRDAKMD 769 (1023)
Q Consensus 715 ~Ls~~----------------~~~~~~i~~~~~~~~~~~~itr~~~~~~~~~~~~---------~~~~~i~~~l~~~~~~ 769 (1023)
.++.- ......+ .+|. .+.+..+.| ...+.+|+ .+.+.+.+.+..+...
T Consensus 215 ~~c~v~~d~~~e~~~~~~~~~~~~~y~L---PDg~--~i~l~~er~-~~~E~LF~P~~~g~~~~gi~~~i~~si~~c~~d 288 (375)
T PTZ00452 215 RLCYTALDPQDEKRIYKESNSQDSPYKL---PDGN--ILTIKSQKF-RCSEILFQPKLIGLEVAGIHHLAYSSIKKCDLD 288 (375)
T ss_pred HhccccCcHHHHHHHhhccCCcCceEEC---CCCC--EEEeehHHh-cCcccccChhhcCCCCCChhHHHHHHHHhCCHh
Confidence 43211 0111222 2333 355666666 33333333 3456666666655322
Q ss_pred --ccccceEEEecCccCcHHHHHHHHHhhcC-----c--ccCCCCCCccceecchHHHHH
Q psy6736 770 --KAQIHDIVLVGGSTRIPKVQKLLQDFFNG-----K--ELNKSINPDEAVAYGAAVQAA 820 (1023)
Q Consensus 770 --~~~i~~V~LvGG~srip~v~~~l~~~f~~-----~--~~~~~~~p~~aVa~GAa~~a~ 820 (1023)
..=.+.|+|+||+|.+|.+.++|.+.+.. . ++..+.++..++=+|++++|.
T Consensus 289 ~r~~L~~nIvL~GG~Sl~~Gf~~RL~~El~~~~p~~~~v~v~~~~~r~~~aW~GgSilas 348 (375)
T PTZ00452 289 LRQELCRNIVLSGGTTLFPGIANRLSNELTNLVPSQLKIQVAAPPDRRFSAWIGGSIQCT 348 (375)
T ss_pred HHHHhhccEEEecccccccCHHHHHHHHHHHhCCCCceeEEecCCCcceeEEECchhhcC
Confidence 22246899999999999999999876621 1 233344666788899999985
No 99
>PRK10719 eutA reactivating factor for ethanolamine ammonia lyase; Provisional
Probab=97.35 E-value=0.00025 Score=80.21 Aligned_cols=82 Identities=18% Similarity=0.179 Sum_probs=57.6
Q ss_pred cceEecCCCCCHHHHHHHHHHHHH------------cCCceeeeecchHHHHHHhccccccCccccccCCCCCcEEEEEE
Q psy6736 117 QNEGLIPAYFNISSVKSTKDSGTI------------AGLNVLRIINEPTAAAIAYGLDKKVGSTAVEYNGSGERNVLIFD 184 (1023)
Q Consensus 117 ~~vitVPa~~~~~qr~~l~~Aa~~------------AGl~~~~li~Ep~AAal~y~~~~~~~~~~~~~~~~~~~~vlV~D 184 (1023)
-.+||.+...-.. ++++.+. ||+++..++. |.|++.+...+ + ++..++++|
T Consensus 90 ahIITg~~~~~~N----l~~~v~~~~~~~gdfVVA~AG~~le~iva-~~ASg~avLse-E-----------ke~gVa~ID 152 (475)
T PRK10719 90 AVIITGETARKEN----AREVVMALSGSAGDFVVATAGPDLESIIA-GKGAGAQTLSE-E-----------RNTRVLNID 152 (475)
T ss_pred EEEEEechhHHHH----HHHHHHHhcccccceeeeccCccHHHhhh-HHHhhHHHhhh-h-----------ccCceEEEE
Confidence 3588887665544 5555554 6777766766 99988766533 2 677899999
Q ss_pred eCCceEEEEEEEEeCCEEEEEEecCCCCccHHHHHH
Q psy6736 185 LGGGTFDVSILTIEDGIFEVKSTAGDTHLGGEDFDN 220 (1023)
Q Consensus 185 ~GggT~dvsv~~~~~~~~~v~~~~~~~~lGG~~~D~ 220 (1023)
+|||||+++++.-+.-. ..+...+||+.++.
T Consensus 153 IGgGTT~iaVf~~G~l~-----~T~~l~vGG~~IT~ 183 (475)
T PRK10719 153 IGGGTANYALFDAGKVI-----DTACLNVGGRLIET 183 (475)
T ss_pred eCCCceEEEEEECCEEE-----EEEEEecccceEEE
Confidence 99999999999753322 23447789988753
No 100
>TIGR02261 benz_CoA_red_D benzoyl-CoA reductase, bcr type, subunit D. This model describes the D subunit of benzoyl-CoA reductase, a 4-subunit enzyme. Many aromatic compounds are metabolized by way of benzoyl-CoA. This family shows sequence similarity to the A subunit (TIGR02259) and to the 2-hydroxyglutaryl-CoA dehydratase alpha chain.
Probab=97.33 E-value=0.006 Score=64.87 Aligned_cols=71 Identities=15% Similarity=0.124 Sum_probs=49.3
Q ss_pred HHhHHHHHHHHHHHHHHHHHcCCCccCcCeEEEEcCCCCcHHHHHHHHHHcCCcc----ccccCCCchhHHhHHHHHH
Q psy6736 289 ELNADLFRGTMEPVEKSLRDAKMDKAQIHDIVLVGGSTRIPKVQKLLQDFFNGKE----LNKSINPDEAVAYGAAVQA 362 (1023)
Q Consensus 289 ~~~~~~~~~i~~~i~~~l~~~~~~~~~i~~V~LvGG~sr~p~v~~~l~~~f~~~~----i~~~~~pd~aVa~GAa~~a 362 (1023)
+++..+...+.+.+...++..+.. -+.|+|+||.++.+.+.+.|++.+++.+ +..+.+|+.+-|.|||++|
T Consensus 188 dI~aGl~~sia~r~~~~~~~~~~~---~~~v~~~GGva~n~~~~~~le~~l~~~~~~~~v~~~~~~q~~gAlGAAl~~ 262 (262)
T TIGR02261 188 NILKGIHESMADRLAKLLKSLGAL---DGTVLCTGGLALDAGLLEALKDAIQEAKMAVAAENHPDAIYAGAIGAALWG 262 (262)
T ss_pred HHHHHHHHHHHHHHHHHHhccCCC---CCcEEEECcccccHHHHHHHHHHhccCCcceEecCCCcchHHHHHHHHHcC
Confidence 344445555555444444443221 1359999999999999999999885433 5556688899999999874
No 101
>PF08841 DDR: Diol dehydratase reactivase ATPase-like domain; InterPro: IPR009191 Diol dehydratase (propanediol dehydratase) and glycerol dehydratase undergo concomitant, irreversible inactivation by glycerol during catalysis [, ]. This inactivation is mechanism-based and involves cleavage of the Co-C bond of the cobalamin cofactor, coenzyme B12 (AdoCbl), forming 5 -deoxyadenosine and a modified coenzyme []. Irreversible inactivation of the enzyme results from tight binding to the modified, inactive cobalamin [, ]. The glycerol-inactivated enzyme undergoes rapid reactivation in the presence of free AdoCbl, ATP, and Mg 2+ (or Mn 2+ ) []. Reactivation is mediated by a complex of two proteins: a large subunit (DdrA/PduG) and a small subunit (DdrB/PduH, IPR009192 from INTERPRO) [, ]. The two subunits of the reactivating factor for glycerol dehydratase have been shown to form a tight complex that serves to reactivate the glycerol-inactivated holoenzyme, as well as O2-inactivated holoenzyme in vitro []. It is believed that this reactivating factor replaces an enzyme-bound, adenine-lacking inactive cobalamin with a free, adenine-containing active cobalamin []. PduG and PduH, part of the propanediol utilization pdu operon, are believed to have a similar function in the reactivation of propanediol dehydratase. PduG was also proposed, on the basis of genetic tests, to be a cobalamin adenosyltransferase involved in the conversion of inactive cobalamin (B12) to AdoCbl []. However, this function has since been shown to belong to another protein, PduO (IPR009221 from INTERPRO, IPR012228 from INTERPRO) []. Please see IPR003207 from INTERPRO, IPR003208 from INTERPRO, IPR009204 from INTERPRO for more details on the propanediol utilization pathway and pdu operon, as well as on the glycerol breakdown pathway.; PDB: 1NBW_C 2D0P_C 2D0O_C.
Probab=97.30 E-value=0.0016 Score=67.74 Aligned_cols=49 Identities=27% Similarity=0.350 Sum_probs=37.3
Q ss_pred cccceEEEecCccCcHHHHHHHHHhhcC-------cccCCCCCCccceecchHHHH
Q psy6736 771 AQIHDIVLVGGSTRIPKVQKLLQDFFNG-------KELNKSINPDEAVAYGAAVQA 819 (1023)
Q Consensus 771 ~~i~~V~LvGG~srip~v~~~l~~~f~~-------~~~~~~~~p~~aVa~GAa~~a 819 (1023)
.+|++|+|||||+.=.-|-+++.+.+.. -.++-..-|..|||.|.++-.
T Consensus 274 R~i~fVVlVGGSALDFEIp~~vtdaLs~y~iVaGRgNIrG~eGPRNAVATGLvlsy 329 (332)
T PF08841_consen 274 RDIPFVVLVGGSALDFEIPQMVTDALSHYGIVAGRGNIRGVEGPRNAVATGLVLSY 329 (332)
T ss_dssp CC--EEEEESGGGGSSSHHHHHHHHHCTTT-EEEE--GGGTSTTSTHHHHHHHHHH
T ss_pred ccCceEEEecCchhhhhhHHHHHHHHhhCcceeeccccccccCchHHHHHHHHHhh
Confidence 5799999999999988888888887732 356667789999999988653
No 102
>TIGR03286 methan_mark_15 putative methanogenesis marker protein 15. Members of this protein family, to date, are found in a completed prokaryotic genome if and only if the species is one of the archaeal methanogens. The exact function is unknown, but likely is linked to methanogenesis or a process closely connected to it. Related proteins include the BadF/BadG/BcrA/BcrD ATPase family (pfam01869), which includes an activator for (R)-2-hydroxyglutaryl-CoA dehydratase.
Probab=97.29 E-value=0.0063 Score=68.24 Aligned_cols=46 Identities=33% Similarity=0.413 Sum_probs=42.5
Q ss_pred CeEEEEcCCCCcHHHHHHHHHHcCCccccccCCCchhHHhHHHHHHH
Q psy6736 317 HDIVLVGGSTRIPKVQKLLQDFFNGKELNKSINPDEAVAYGAAVQAA 363 (1023)
Q Consensus 317 ~~V~LvGG~sr~p~v~~~l~~~f~~~~i~~~~~pd~aVa~GAa~~a~ 363 (1023)
+.|+++||.++.+.+.+.+++.+ +.++..+.+|..+-|.|||++|.
T Consensus 357 ~~VvftGGva~N~gvv~ale~~L-g~~iivPe~pq~~GAiGAAL~A~ 402 (404)
T TIGR03286 357 EPVILVGGTSLIEGLVKALGDLL-GIEVVVPEYSQYIGAVGAALLAS 402 (404)
T ss_pred CcEEEECChhhhHHHHHHHHHHh-CCcEEECCcccHHHHHHHHHHhc
Confidence 45999999999999999999999 67888899999999999999984
No 103
>PTZ00466 actin-like protein; Provisional
Probab=97.28 E-value=0.002 Score=73.87 Aligned_cols=167 Identities=19% Similarity=0.208 Sum_probs=97.5
Q ss_pred ceEEEEEeCCceEEEEEEEEeCCEEEEEEecCCCCCcHHHHHHHHHHHHHHHHHhhhccCcchhHHHHHHHHHHHHHHhh
Q psy6736 635 RNVLIFDLGGGTFDVSILTIEDGIFEVKSTAGDTHLGGEDFDNRMVNHFVQEFKRKYKKDLTTNKRALRRLRTACERAKR 714 (1023)
Q Consensus 635 ~~vlV~D~GggT~dvsi~~~~~~~~~v~~~~gd~~lGG~~~D~~l~~~~~~~~~~~~~~~~~~~~~~~~~L~~~~e~~K~ 714 (1023)
.+-+|+|+|.+.+.|+-+. +|..- ........+||.++++.|.+.+.+. .+..+...+ +..++.+|+
T Consensus 154 ~tglVVD~G~~~t~v~PV~--~G~~~-~~~~~~~~~GG~~lt~~L~~lL~~~---~~~~~~~~~-------~~~v~~iKe 220 (380)
T PTZ00466 154 TNGTVLDCGDGVCHCVSIY--EGYSI-TNTITRTDVAGRDITTYLGYLLRKN---GHLFNTSAE-------MEVVKNMKE 220 (380)
T ss_pred ceEEEEeCCCCceEEEEEE--CCEEe-ecceeEecCchhHHHHHHHHHHHhc---CCCCCcHHH-------HHHHHHHHH
Confidence 4689999999999987655 44332 2222235799999999998876532 111111111 122334444
Q ss_pred hcCC---C----------c--eeEEEEecccCCcceEEEecHHHHHHHHHHHHH---------HHHHHHHHHHHHcCCCc
Q psy6736 715 TLSS---S----------T--QASIEIDSLFEGVDFYTSITRARFEELNADLFR---------GTMEPVEKSLRDAKMDK 770 (1023)
Q Consensus 715 ~Ls~---~----------~--~~~~~i~~~~~~~~~~~~itr~~~~~~~~~~~~---------~~~~~i~~~l~~~~~~~ 770 (1023)
.++. + . ..... +.+|. .+.|..+.|. ..+.+|+ .+-+.|.+.+.++..+.
T Consensus 221 ~~c~v~~d~~~e~~~~~~~~~~~~y~---LPdg~--~i~l~~er~~-~~E~LF~P~~~g~~~~gl~~~i~~sI~~c~~d~ 294 (380)
T PTZ00466 221 NCCYVSFNMNKEKNSSEKALTTLPYI---LPDGS--QILIGSERYR-APEVLFNPSILGLEYLGLSELIVTSITRADMDL 294 (380)
T ss_pred hCeEecCChHHHHhhccccccceeEE---CCCCc--EEEEchHHhc-CcccccCccccCCCCCCHHHHHHHHHHhCChhh
Confidence 4321 0 0 01122 22333 3556666653 3344443 34566666666654321
Q ss_pred --cccceEEEecCccCcHHHHHHHHHhhcC-------cccCCCCCCccceecchHHHHH
Q psy6736 771 --AQIHDIVLVGGSTRIPKVQKLLQDFFNG-------KELNKSINPDEAVAYGAAVQAA 820 (1023)
Q Consensus 771 --~~i~~V~LvGG~srip~v~~~l~~~f~~-------~~~~~~~~p~~aVa~GAa~~a~ 820 (1023)
.=...|+|+||+|.+|.+.+.|.+.+.. .++..+.++..++=+||+++|.
T Consensus 295 r~~L~~nIvL~GG~Sl~~Gf~~RL~~EL~~l~p~~~~v~v~~~~~r~~~aW~GgSilas 353 (380)
T PTZ00466 295 RRTLYSHIVLSGGTTMFHGFGDRLLNEIRKFAPKDITIRISAPPERKFSTFIGGSILAS 353 (380)
T ss_pred HHHHhhcEEEeCCccccCCHHHHHHHHHHHhCCCCceEEEecCCCCceeEEECchhhcC
Confidence 2246799999999999999999887622 1233445667788899999985
No 104
>PTZ00004 actin-2; Provisional
Probab=97.25 E-value=0.00097 Score=76.60 Aligned_cols=168 Identities=18% Similarity=0.218 Sum_probs=97.5
Q ss_pred ceEEEEEeCCceEEEEEEEEeCCEEEEEEecCCCCCcHHHHHHHHHHHHHHHHHhhhccCcchhHHHHHHHHHHHHHHhh
Q psy6736 635 RNVLIFDLGGGTFDVSILTIEDGIFEVKSTAGDTHLGGEDFDNRMVNHFVQEFKRKYKKDLTTNKRALRRLRTACERAKR 714 (1023)
Q Consensus 635 ~~vlV~D~GggT~dvsi~~~~~~~~~v~~~~gd~~lGG~~~D~~l~~~~~~~~~~~~~~~~~~~~~~~~~L~~~~e~~K~ 714 (1023)
.+-+|+|+|.+.++++-+. +|..--.+. ....+||.++++.|.+.+..+- +....... ...++..|+
T Consensus 149 ~tglVVDiG~~~t~v~pV~--dG~~l~~~~-~~~~~GG~~lt~~L~~lL~~~~---~~~~~~~~-------~~~~~~iKe 215 (378)
T PTZ00004 149 TTGIVLDSGDGVSHTVPIY--EGYSLPHAI-HRLDVAGRDLTEYMMKILHERG---TTFTTTAE-------KEIVRDIKE 215 (378)
T ss_pred ceEEEEECCCCcEEEEEEE--CCEEeecce-eeecccHHHHHHHHHHHHHhcC---CCCCcHHH-------HHHHHHHhh
Confidence 4679999999999987765 454322222 2357999999999998875431 11111111 112344444
Q ss_pred hcCCC---------------c--eeEEEEecccCCcceEEEecHHHHH---HHHHHH------HHHHHHHHHHHHHHcCC
Q psy6736 715 TLSSS---------------T--QASIEIDSLFEGVDFYTSITRARFE---ELNADL------FRGTMEPVEKSLRDAKM 768 (1023)
Q Consensus 715 ~Ls~~---------------~--~~~~~i~~~~~~~~~~~~itr~~~~---~~~~~~------~~~~~~~i~~~l~~~~~ 768 (1023)
.++.- . ...+. +.+|. .+.+..+.|. -++.|- ...+.+.|.+++.++..
T Consensus 216 ~~c~v~~d~~~~~~~~~~~~~~~~~~y~---lPdg~--~i~l~~er~~~~E~LF~P~~~~~~~~~gi~~~i~~sI~~~~~ 290 (378)
T PTZ00004 216 KLCYIALDFDEEMGNSAGSSDKYEESYE---LPDGT--IITVGSERFRCPEALFQPSLIGKEEPPGIHELTFQSINKCDI 290 (378)
T ss_pred cceeecCCHHHHHhhhhcCccccceEEE---CCCCC--EEEEcHHHeeCcccccChhhcCccccCChHHHHHHHHHhCCh
Confidence 43210 0 11122 22333 3455555542 233332 22455666677666543
Q ss_pred C--ccccceEEEecCccCcHHHHHHHHHhhcC-------cccCCCCCCccceecchHHHHH
Q psy6736 769 D--KAQIHDIVLVGGSTRIPKVQKLLQDFFNG-------KELNKSINPDEAVAYGAAVQAA 820 (1023)
Q Consensus 769 ~--~~~i~~V~LvGG~srip~v~~~l~~~f~~-------~~~~~~~~p~~aVa~GAa~~a~ 820 (1023)
+ ..=...|+|+||+|.+|.+.++|...+.. .++....++..++=+||+++|.
T Consensus 291 d~r~~L~~nIvl~GG~s~~~Gf~~RL~~EL~~~~p~~~~~~v~~~~~~~~~aW~Ggsilas 351 (378)
T PTZ00004 291 DIRKDLYGNIVLSGGTTMYRGLPERLTKELTTLAPSTMKIKVVAPPERKYSVWIGGSILSS 351 (378)
T ss_pred hHHHHHHhhEEeccchhcCcCHHHHHHHHHHHhCCCCccEEEecCCCCceeEEECcccccC
Confidence 2 12246799999999999999999887621 1233445677888899998885
No 105
>COG4457 SrfB Uncharacterized protein conserved in bacteria, putative virulence factor [Function unknown]
Probab=97.19 E-value=0.036 Score=64.00 Aligned_cols=54 Identities=24% Similarity=0.340 Sum_probs=40.7
Q ss_pred ccCcCeEEEEcCCCCcHHHHHHHHHHcCCc-------------------cccccCCCchhHHhHHHHHHHHHh
Q psy6736 313 KAQIHDIVLVGGSTRIPKVQKLLQDFFNGK-------------------ELNKSINPDEAVAYGAAVQAAILH 366 (1023)
Q Consensus 313 ~~~i~~V~LvGG~sr~p~v~~~l~~~f~~~-------------------~i~~~~~pd~aVa~GAa~~a~~l~ 366 (1023)
-.+.|.++|+|--+|+|.|+..++...+-. +..+.-||...+|.||-+++..+.
T Consensus 776 ~y~cDVlLlTGRPsrlPgvqalfr~~~pvp~~rilpl~~Yrvg~WYPF~k~grIddPKtTAaVGAMLC~Lsl~ 848 (1014)
T COG4457 776 HYDCDVLLLTGRPSRLPGVQALFRHLQPVPVNRILPLDDYRVGTWYPFRKQGRIDDPKTTAAVGAMLCALSLE 848 (1014)
T ss_pred hhcccEEEEcCCcccCccHHHHHhhcCCCCCCceEeccceeccceecccccCcCCCcchHHHHHHHHHHHHhh
Confidence 345688999999999999999998876210 112223899999999998876654
No 106
>TIGR02259 benz_CoA_red_A benzoyl-CoA reductase, bcr type, subunit A. This model describes A, or gamma, subunit of the bcr type of benzoyl-CoA reductase, a 4-subunit enzyme. Many aromatic compounds are metabolized by way of benzoyl-CoA. This family shows strong sequence similarity to the 2-hydroxyglutaryl-CoA dehydratase alpha chain and to subunits of different types of benzoyl-CoA reductase (such as the bzd type).
Probab=97.17 E-value=0.0066 Score=67.17 Aligned_cols=70 Identities=17% Similarity=0.173 Sum_probs=51.1
Q ss_pred HhHHHHHHHHHHHHHHHHHcCCCccCcCeEEEEcCCCCcHHHHHHHHHHcC----CccccccCCCchhHHhHHHHHH
Q psy6736 290 LNADLFRGTMEPVEKSLRDAKMDKAQIHDIVLVGGSTRIPKVQKLLQDFFN----GKELNKSINPDEAVAYGAAVQA 362 (1023)
Q Consensus 290 ~~~~~~~~i~~~i~~~l~~~~~~~~~i~~V~LvGG~sr~p~v~~~l~~~f~----~~~i~~~~~pd~aVa~GAa~~a 362 (1023)
++..+...+...+...+...+ .--+.|+|+||.++.+.+.+.|++.++ +.++..+.+|..+-|.|||++|
T Consensus 359 IaAGL~~SIA~Rv~s~l~r~~---~i~~~VvftGGvA~N~gvv~aLe~~L~~~~~~~~V~Vp~~pq~~GALGAAL~a 432 (432)
T TIGR02259 359 ILAGLHRAIILRAISIISRSG---GITDQFTFTGGVAKNEAAVKELRKLIKENYGEVQINIDPDSIYTGALGASEFA 432 (432)
T ss_pred HHHHHHHHHHHHHHHHHhccc---CCCCCEEEECCccccHHHHHHHHHHHccccCCCeEecCCCccHHHHHHHHHhC
Confidence 444455555544444444431 112569999999999999999999984 4567788899999999999975
No 107
>COG1924 Activator of 2-hydroxyglutaryl-CoA dehydratase (HSP70-class ATPase domain) [Lipid metabolism]
Probab=97.16 E-value=0.023 Score=62.15 Aligned_cols=74 Identities=26% Similarity=0.311 Sum_probs=56.9
Q ss_pred HHHHhHHHHHHHHHHHHH-HHHHcCCCccCcCeEEEEcCCCCcHHHHHHHHHHcCCccccccCCCchhHHhHHHHHHHHH
Q psy6736 287 FEELNADLFRGTMEPVEK-SLRDAKMDKAQIHDIVLVGGSTRIPKVQKLLQDFFNGKELNKSINPDEAVAYGAAVQAAIL 365 (1023)
Q Consensus 287 ~e~~~~~~~~~i~~~i~~-~l~~~~~~~~~i~~V~LvGG~sr~p~v~~~l~~~f~~~~i~~~~~pd~aVa~GAa~~a~~l 365 (1023)
.|+++..+...+.+.+-. +++.-... +-|+|+||.+....+.+++++.+ +.++..+.+|...-|.|||++|...
T Consensus 317 ~EdI~AGl~~Sv~~~v~~~~~~~~~i~----~~iv~~GGva~n~av~~ale~~l-g~~V~vP~~~ql~GAiGAAL~a~~~ 391 (396)
T COG1924 317 PEDILAGLAYSVAENVAEKVIKRVDIE----EPIVLQGGVALNKAVVRALEDLL-GRKVIVPPYAQLMGAIGAALIAKEV 391 (396)
T ss_pred HHHHHHHHHHHHHHHHHHHHhhccCCC----CCEEEECcchhhHHHHHHHHHHh-CCeeecCCccchhhHHHHHHHHhhh
Confidence 345566666655554444 55443332 22999999999999999999999 7899999999999999999998644
No 108
>PF07520 SrfB: Virulence factor SrfB; InterPro: IPR009216 This entry represents proteins of unknown function. It has been shown in Salmonella enterica that srfB is one of the genes activated by the global signal transduction/regulatory system SsrA/B []. This activation takes place within eukaryotic cells. The activated genes include pathogenicity island 2 (SPI-2) genes and at least 10 other genes (srfB is one of them) which are believed to be horizontally acquired, and to be involved in virulence/pathogenicity [].
Probab=96.97 E-value=0.016 Score=71.25 Aligned_cols=84 Identities=17% Similarity=0.227 Sum_probs=60.3
Q ss_pred ceEEEecHHHHHHHHH---HHHHHHHHHHHHHHHHcCCCccccceEEEecCccCcHHHHHHHHHhhcCc-----------
Q psy6736 734 DFYTSITRARFEELNA---DLFRGTMEPVEKSLRDAKMDKAQIHDIVLVGGSTRIPKVQKLLQDFFNGK----------- 799 (1023)
Q Consensus 734 ~~~~~itr~~~~~~~~---~~~~~~~~~i~~~l~~~~~~~~~i~~V~LvGG~srip~v~~~l~~~f~~~----------- 799 (1023)
+..+.|+..++...+. -.|..++..+-+++.. -+-|.++|+|--||+|.|+..+++..+-.
T Consensus 730 dv~l~i~~~~l~~~~~~~r~~i~~~L~~LcEvv~~-----Y~CDVLLLTGRPSrlPgvqalfr~~~pvPp~RIv~l~~Y~ 804 (1002)
T PF07520_consen 730 DVPLEIDLEKLHAAFLSDRMVICKTLRALCEVVHH-----YDCDVLLLTGRPSRLPGVQALFRHLLPVPPDRIVPLHGYR 804 (1002)
T ss_pred cceEEEcHHHHHHHHHhCcccHHHHHHHHHHHHHH-----hCCCEEEEcCCccccHHHHHHHHHhCCCCcccEEecCCee
Confidence 4567889988888664 4455555555555443 24588999999999999999999987421
Q ss_pred --------ccCCCCCCccceecchHHHHHHH
Q psy6736 800 --------ELNKSINPDEAVAYGAAVQAAIL 822 (1023)
Q Consensus 800 --------~~~~~~~p~~aVa~GAa~~a~~l 822 (1023)
+..+--||.+.||.||.+.+...
T Consensus 805 tg~WYPF~~~~rI~dPKTTaaVGAmLc~La~ 835 (1002)
T PF07520_consen 805 TGNWYPFNDQGRIDDPKTTAAVGAMLCLLAE 835 (1002)
T ss_pred ecccccCCCCCcCCCchHHHHHHHHHHHHhc
Confidence 11234599999999998887543
No 109
>PRK13317 pantothenate kinase; Provisional
Probab=96.84 E-value=0.0097 Score=64.63 Aligned_cols=49 Identities=24% Similarity=0.262 Sum_probs=42.5
Q ss_pred ccceEEEec-CccCcHHHHHHHHHhhc--CcccCCCCCCccceecchHHHHH
Q psy6736 772 QIHDIVLVG-GSTRIPKVQKLLQDFFN--GKELNKSINPDEAVAYGAAVQAA 820 (1023)
Q Consensus 772 ~i~~V~LvG-G~srip~v~~~l~~~f~--~~~~~~~~~p~~aVa~GAa~~a~ 820 (1023)
.++.|+++| |.++.|.+++.+.+.+. +.++..+.||..+.|+|||++|.
T Consensus 222 ~~~~Ivf~G~gla~n~~l~~~l~~~l~~~~~~~~~p~~~~~~gAlGAaL~a~ 273 (277)
T PRK13317 222 NIENIVYIGSTLTNNPLLQEIIESYTKLRNCTPIFLENGGYSGAIGALLLAT 273 (277)
T ss_pred CCCeEEEECcccccCHHHHHHHHHHHhcCCceEEecCCCchhHHHHHHHHhh
Confidence 456899999 79999999999998873 46677888999999999999884
No 110
>COG1924 Activator of 2-hydroxyglutaryl-CoA dehydratase (HSP70-class ATPase domain) [Lipid metabolism]
Probab=96.83 E-value=0.0039 Score=68.04 Aligned_cols=157 Identities=21% Similarity=0.315 Sum_probs=88.5
Q ss_pred EEEEeCCceEEEEEEEEeCCEEEEEEecCCCCCcHHHHHHHHHHHHHHHHHhhhccCcchhHHHHHHHHHHHHHHhhhcC
Q psy6736 638 LIFDLGGGTFDVSILTIEDGIFEVKSTAGDTHLGGEDFDNRMVNHFVQEFKRKYKKDLTTNKRALRRLRTACERAKRTLS 717 (1023)
Q Consensus 638 lV~D~GggT~dvsi~~~~~~~~~v~~~~gd~~lGG~~~D~~l~~~~~~~~~~~~~~~~~~~~~~~~~L~~~~e~~K~~Ls 717 (1023)
.|+|+||- |.-++++.+|.+.-.....-..-|.-.|=+.++ +..+.++ ..+-+.+++++..-.
T Consensus 232 tIiDIGGQ--D~K~i~i~dG~v~df~mN~~CAAGtGrFLE~~A--------~~Lgv~v-------~E~~~~A~~~~~~v~ 294 (396)
T COG1924 232 TVIDIGGQ--DSKVIKLEDGKVDDFTMNDKCAAGTGRFLEVIA--------RRLGVDV-------EELGKLALKATPPVK 294 (396)
T ss_pred EEEEecCc--ceeEEEEeCCeeeeeEeccccccccchHHHHHH--------HHhCCCH-------HHHHHHHhcCCCCcc
Confidence 78999998 777778878876554444333333223322332 2223322 223333444444211
Q ss_pred CCceeEEEEecccCCcceEEEe-cHHHHHHHHHHHHHHHHHHHHH-HHHHcCCCccccceEEEecCccCcHHHHHHHHHh
Q psy6736 718 SSTQASIEIDSLFEGVDFYTSI-TRARFEELNADLFRGTMEPVEK-SLRDAKMDKAQIHDIVLVGGSTRIPKVQKLLQDF 795 (1023)
Q Consensus 718 ~~~~~~~~i~~~~~~~~~~~~i-tr~~~~~~~~~~~~~~~~~i~~-~l~~~~~~~~~i~~V~LvGG~srip~v~~~l~~~ 795 (1023)
-+....+-.+ .++.-.+ .-...|+++.-+...+.+.+-. +++...+ .+ -|+|+||.+....+.+++++.
T Consensus 295 i~S~CaVF~e-----Sevi~~~~~G~~~EdI~AGl~~Sv~~~v~~~~~~~~~i--~~--~iv~~GGva~n~av~~ale~~ 365 (396)
T COG1924 295 INSRCAVFAE-----SEVISALAEGASPEDILAGLAYSVAENVAEKVIKRVDI--EE--PIVLQGGVALNKAVVRALEDL 365 (396)
T ss_pred cCCeeEEEeh-----HHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHhhccCC--CC--CEEEECcchhhHHHHHHHHHH
Confidence 1111111111 0000000 0012344555555554444333 4443332 22 299999999999999999999
Q ss_pred hcCcccCCCCCCccceecchHHHHHH
Q psy6736 796 FNGKELNKSINPDEAVAYGAAVQAAI 821 (1023)
Q Consensus 796 f~~~~~~~~~~p~~aVa~GAa~~a~~ 821 (1023)
+ +.++..+.+|..+-|+|||++|..
T Consensus 366 l-g~~V~vP~~~ql~GAiGAAL~a~~ 390 (396)
T COG1924 366 L-GRKVIVPPYAQLMGAIGAALIAKE 390 (396)
T ss_pred h-CCeeecCCccchhhHHHHHHHHhh
Confidence 9 688999999999999999999954
No 111
>PRK13317 pantothenate kinase; Provisional
Probab=96.66 E-value=0.031 Score=60.78 Aligned_cols=49 Identities=24% Similarity=0.262 Sum_probs=42.5
Q ss_pred CcCeEEEEc-CCCCcHHHHHHHHHHcC--CccccccCCCchhHHhHHHHHHH
Q psy6736 315 QIHDIVLVG-GSTRIPKVQKLLQDFFN--GKELNKSINPDEAVAYGAAVQAA 363 (1023)
Q Consensus 315 ~i~~V~LvG-G~sr~p~v~~~l~~~f~--~~~i~~~~~pd~aVa~GAa~~a~ 363 (1023)
.++.|+++| |.++.|.+++.+.+.+. +.++..+.||..+.|.|||+++.
T Consensus 222 ~~~~Ivf~G~gla~n~~l~~~l~~~l~~~~~~~~~p~~~~~~gAlGAaL~a~ 273 (277)
T PRK13317 222 NIENIVYIGSTLTNNPLLQEIIESYTKLRNCTPIFLENGGYSGAIGALLLAT 273 (277)
T ss_pred CCCeEEEECcccccCHHHHHHHHHHHhcCCceEEecCCCchhHHHHHHHHhh
Confidence 357899999 79999999999998873 46777788999999999999875
No 112
>TIGR02261 benz_CoA_red_D benzoyl-CoA reductase, bcr type, subunit D. This model describes the D subunit of benzoyl-CoA reductase, a 4-subunit enzyme. Many aromatic compounds are metabolized by way of benzoyl-CoA. This family shows sequence similarity to the A subunit (TIGR02259) and to the 2-hydroxyglutaryl-CoA dehydratase alpha chain.
Probab=96.66 E-value=0.022 Score=60.68 Aligned_cols=70 Identities=16% Similarity=0.121 Sum_probs=47.9
Q ss_pred HHHHHHHHHHHHHHHHHHHcCCCccccceEEEecCccCcHHHHHHHHHhhcCcc----cCCCCCCccceecchHHHH
Q psy6736 747 LNADLFRGTMEPVEKSLRDAKMDKAQIHDIVLVGGSTRIPKVQKLLQDFFNGKE----LNKSINPDEAVAYGAAVQA 819 (1023)
Q Consensus 747 ~~~~~~~~~~~~i~~~l~~~~~~~~~i~~V~LvGG~srip~v~~~l~~~f~~~~----~~~~~~p~~aVa~GAa~~a 819 (1023)
++.-+...+.+.+...++..+.. -+.|+|.||.++.+.+.+.+++.+++.+ +..+.+|+.+-|+|||++|
T Consensus 189 I~aGl~~sia~r~~~~~~~~~~~---~~~v~~~GGva~n~~~~~~le~~l~~~~~~~~v~~~~~~q~~gAlGAAl~~ 262 (262)
T TIGR02261 189 ILKGIHESMADRLAKLLKSLGAL---DGTVLCTGGLALDAGLLEALKDAIQEAKMAVAAENHPDAIYAGAIGAALWG 262 (262)
T ss_pred HHHHHHHHHHHHHHHHHhccCCC---CCcEEEECcccccHHHHHHHHHHhccCCcceEecCCCcchHHHHHHHHHcC
Confidence 34444444444444444433211 1359999999999999999999885433 4456688899999999874
No 113
>KOG0676|consensus
Probab=96.56 E-value=0.027 Score=62.82 Aligned_cols=116 Identities=12% Similarity=0.078 Sum_probs=67.2
Q ss_pred cCHHHHHhHhhhhccCcchHHHHHHHHHhCCcCCcceEecCCCCCHHHHHHHHHHH-HHcCCceeeeecchHHHHHHhcc
Q psy6736 83 VSAQELSRGVKAIFTAPDILKKKTSEDILRKVDGQNEGLIPAYFNISSVKSTKDSG-TIAGLNVLRIINEPTAAAIAYGL 161 (1023)
Q Consensus 83 ~~~~~v~a~~L~~~~~~~~~l~~~a~~~~~~~~~~~vitVPa~~~~~qr~~l~~Aa-~~AGl~~~~li~Ep~AAal~y~~ 161 (1023)
+..-+-...++ .|+...-.... .....+++|-|..|....|+.|-+.. +.-+.+-+.+ +..|.+ |+.
T Consensus 75 v~~wd~me~iw-------~~if~~~L~~~-Pee~pvllte~pl~p~~nREk~tqi~FE~fnvpa~yv---a~qavl-ya~ 142 (372)
T KOG0676|consen 75 VTDWDDMEKIW-------HHLFYSELLVA-PEEHPVLLTEPPLNPKANREKLTQIMFETFNVPALYV---AIQAVL-YAS 142 (372)
T ss_pred ccchHHHHHHH-------HHHHHHhhccC-cccCceEeecCCCCchHhHHHHHHHhhhhcCccHhHH---HHHHHH-HHc
Confidence 43333335565 66662222111 23367999999999999998877654 3333333333 223333 544
Q ss_pred ccccCccccccCCCCCcEEEEEEeCCceEEE-EEEEEeCCEEEEEEecCCCCccHHHHHHHHHHHHHH
Q psy6736 162 DKKVGSTAVEYNGSGERNVLIFDLGGGTFDV-SILTIEDGIFEVKSTAGDTHLGGEDFDNRMVNHFVQ 228 (1023)
Q Consensus 162 ~~~~~~~~~~~~~~~~~~vlV~D~GggT~dv-sv~~~~~~~~~v~~~~~~~~lGG~~~D~~l~~~l~~ 228 (1023)
.+ .+=+|+|+|.|-+++ -+++- . .+...-....+||+++++-+...|.+
T Consensus 143 g~--------------ttG~VvD~G~gvt~~vPI~eG---~-~lp~ai~~ldl~G~dlt~~l~~~L~~ 192 (372)
T KOG0676|consen 143 GR--------------TTGLVVDSGDGVTHVVPIYEG---Y-ALPHAILRLDLAGRDLTDYLLKQLRK 192 (372)
T ss_pred CC--------------eeEEEEEcCCCceeeeecccc---c-ccchhhheecccchhhHHHHHHHHHh
Confidence 33 245999999996654 44432 1 12222334679999999877666665
No 114
>TIGR02259 benz_CoA_red_A benzoyl-CoA reductase, bcr type, subunit A. This model describes A, or gamma, subunit of the bcr type of benzoyl-CoA reductase, a 4-subunit enzyme. Many aromatic compounds are metabolized by way of benzoyl-CoA. This family shows strong sequence similarity to the 2-hydroxyglutaryl-CoA dehydratase alpha chain and to subunits of different types of benzoyl-CoA reductase (such as the bzd type).
Probab=96.54 E-value=0.026 Score=62.58 Aligned_cols=46 Identities=20% Similarity=0.221 Sum_probs=40.9
Q ss_pred ceEEEecCccCcHHHHHHHHHhhc----CcccCCCCCCccceecchHHHH
Q psy6736 774 HDIVLVGGSTRIPKVQKLLQDFFN----GKELNKSINPDEAVAYGAAVQA 819 (1023)
Q Consensus 774 ~~V~LvGG~srip~v~~~l~~~f~----~~~~~~~~~p~~aVa~GAa~~a 819 (1023)
+.|+|+||.++.+.+.+.|++.++ +.++..+.+|+.+-|+|||++|
T Consensus 383 ~~VvftGGvA~N~gvv~aLe~~L~~~~~~~~V~Vp~~pq~~GALGAAL~a 432 (432)
T TIGR02259 383 DQFTFTGGVAKNEAAVKELRKLIKENYGEVQINIDPDSIYTGALGASEFA 432 (432)
T ss_pred CCEEEECCccccHHHHHHHHHHHccccCCCeEecCCCccHHHHHHHHHhC
Confidence 469999999999999999999984 4567788999999999999875
No 115
>COG4972 PilM Tfp pilus assembly protein, ATPase PilM [Cell motility and secretion / Intracellular trafficking and secretion]
Probab=96.45 E-value=0.031 Score=60.06 Aligned_cols=116 Identities=17% Similarity=0.309 Sum_probs=76.1
Q ss_pred EEEEEeCCceEEEEEEEEeCCEEEEEEecCCCCCcHHHHHHHHHHHHHHHHHhhhccCcchhHHHHHHHHHHHHHHhhhc
Q psy6736 637 VLIFDLGGGTFDVSILTIEDGIFEVKSTAGDTHLGGEDFDNRMVNHFVQEFKRKYKKDLTTNKRALRRLRTACERAKRTL 716 (1023)
Q Consensus 637 vlV~D~GggT~dvsi~~~~~~~~~v~~~~gd~~lGG~~~D~~l~~~~~~~~~~~~~~~~~~~~~~~~~L~~~~e~~K~~L 716 (1023)
++|+|+|+..+.++++. ++..- ...+..+||+.+..++...+ ..+. ..++.+|...
T Consensus 195 vav~~Igat~s~l~vi~--~gk~l---y~r~~~~g~~Qlt~~i~r~~--------~L~~-----------~~a~~~k~~~ 250 (354)
T COG4972 195 VAVFDIGATSSELLVIQ--DGKIL---YTREVPVGTDQLTQEIQRAY--------SLTE-----------EKAEEIKRGG 250 (354)
T ss_pred heeeeecccceEEEEEE--CCeee---eEeeccCcHHHHHHHHHHHh--------CCCh-----------hHhHHHHhCC
Confidence 89999999999999987 33221 12346799999998886432 2111 2345555543
Q ss_pred CCCceeEEEEecccCCcceEEEecHHHHHHHHHHHHHHHHHHHHHHHHH--cCCCccccceEEEecCccCcHHHHHHHHH
Q psy6736 717 SSSTQASIEIDSLFEGVDFYTSITRARFEELNADLFRGTMEPVEKSLRD--AKMDKAQIHDIVLVGGSTRIPKVQKLLQD 794 (1023)
Q Consensus 717 s~~~~~~~~i~~~~~~~~~~~~itr~~~~~~~~~~~~~~~~~i~~~l~~--~~~~~~~i~~V~LvGG~srip~v~~~l~~ 794 (1023)
.--. +--.+...+.+..+..-|.+.|+- +.-...+|++|+|.||+..+-.+.+++.+
T Consensus 251 ~~P~---------------------~y~~~vl~~f~~~l~~ei~Rslqfy~~~s~~~~id~i~LaGggA~l~gL~~~i~q 309 (354)
T COG4972 251 TLPT---------------------DYGSEVLRPFLGELTQEIRRSLQFYLSQSEMVDIDQILLAGGGASLEGLAAAIQQ 309 (354)
T ss_pred CCCC---------------------chhHHHHHHHHHHHHHHHHHHHHHHHhccccceeeEEEEecCCcchhhHHHHHHH
Confidence 2111 112234556666666666666652 22234679999999999999999999999
Q ss_pred hhc
Q psy6736 795 FFN 797 (1023)
Q Consensus 795 ~f~ 797 (1023)
.++
T Consensus 310 rl~ 312 (354)
T COG4972 310 RLS 312 (354)
T ss_pred HhC
Confidence 883
No 116
>TIGR03286 methan_mark_15 putative methanogenesis marker protein 15. Members of this protein family, to date, are found in a completed prokaryotic genome if and only if the species is one of the archaeal methanogens. The exact function is unknown, but likely is linked to methanogenesis or a process closely connected to it. Related proteins include the BadF/BadG/BcrA/BcrD ATPase family (pfam01869), which includes an activator for (R)-2-hydroxyglutaryl-CoA dehydratase.
Probab=96.43 E-value=0.021 Score=64.20 Aligned_cols=46 Identities=33% Similarity=0.413 Sum_probs=42.2
Q ss_pred ceEEEecCccCcHHHHHHHHHhhcCcccCCCCCCccceecchHHHHH
Q psy6736 774 HDIVLVGGSTRIPKVQKLLQDFFNGKELNKSINPDEAVAYGAAVQAA 820 (1023)
Q Consensus 774 ~~V~LvGG~srip~v~~~l~~~f~~~~~~~~~~p~~aVa~GAa~~a~ 820 (1023)
+.|+++||.++.+.+.+.+++.+ +.++..+.+|+.+.|+|||++|.
T Consensus 357 ~~VvftGGva~N~gvv~ale~~L-g~~iivPe~pq~~GAiGAAL~A~ 402 (404)
T TIGR03286 357 EPVILVGGTSLIEGLVKALGDLL-GIEVVVPEYSQYIGAVGAALLAS 402 (404)
T ss_pred CcEEEECChhhhHHHHHHHHHHh-CCcEEECCcccHHHHHHHHHHhc
Confidence 35999999999999999999999 67788899999999999999984
No 117
>PF02782 FGGY_C: FGGY family of carbohydrate kinases, C-terminal domain; InterPro: IPR018485 It has been shown [] that four different type of carbohydrate kinases seem to be evolutionary related. These enzymes include L-fucolokinase (2.7.1.51 from EC) (gene fucK); gluconokinase (2.7.1.12 from EC) (gene gntK); glycerol kinase (2.7.1.30 from EC) (gene glpK); xylulokinase (2.7.1.17 from EC) (gene xylB); and L-xylulose kinase (2.7.1.53 from EC) (gene lyxK). These enzymes are proteins of from 480 to 520 amino acid residues. This entry represents the C-terminal domain of these proteins. It adopts a ribonuclease H-like fold and is structurally related to the N-terminal domain [, ].; GO: 0016773 phosphotransferase activity, alcohol group as acceptor, 0005975 carbohydrate metabolic process; PDB: 4E1J_B 2W40_C 2W41_A 2UYT_A 2CGK_B 2CGL_A 2CGJ_A 3GBT_A 3LL3_B 3HZ6_A ....
Probab=96.25 E-value=0.0091 Score=61.90 Aligned_cols=75 Identities=25% Similarity=0.404 Sum_probs=53.7
Q ss_pred HHHhHHHHHHHHHHHHHHHHHcCCC-ccCcCeEEEEcCCCCcHHHHHHHHHHcCCccccccCCCchhHHhHHHHHHHH
Q psy6736 288 EELNADLFRGTMEPVEKSLRDAKMD-KAQIHDIVLVGGSTRIPKVQKLLQDFFNGKELNKSINPDEAVAYGAAVQAAI 364 (1023)
Q Consensus 288 e~~~~~~~~~i~~~i~~~l~~~~~~-~~~i~~V~LvGG~sr~p~v~~~l~~~f~~~~i~~~~~pd~aVa~GAa~~a~~ 364 (1023)
.+++.-+++.+.-.++..++...-. ...++.|+++||.++.|.+.+.+.+.| +.++... +..++.|.|||+.|+.
T Consensus 121 ~~~~rAv~Egia~~~~~~~~~l~~~~~~~~~~i~~~GG~~~n~~~~q~~Advl-~~~V~~~-~~~e~~a~GaA~~A~~ 196 (198)
T PF02782_consen 121 ADLARAVLEGIAFSLRQILEELEELTGIPIRRIRVSGGGAKNPLWMQILADVL-GRPVVRP-EVEEASALGAALLAAV 196 (198)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHTSCESEEEEESGGGGSHHHHHHHHHHH-TSEEEEE-SSSTHHHHHHHHHHHH
T ss_pred HHHHHHHHHhHHHHHHHhhhhccccccccceeeEeccccccChHHHHHHHHHh-CCceEeC-CCCchHHHHHHHHHHh
Confidence 3444555555554444444433111 223799999999999999999999999 6887665 4489999999999874
No 118
>KOG0797|consensus
Probab=96.08 E-value=0.037 Score=62.29 Aligned_cols=121 Identities=17% Similarity=0.135 Sum_probs=84.8
Q ss_pred cccCHHHHHhHhhhhccCcchHHHHHH-HHHhCCcCC-----cceEecCCCCCHHHHHH-HHHHHHHcCCceeeeecchH
Q psy6736 81 KAVSAQELSRGVKAIFTAPDILKKKTS-EDILRKVDG-----QNEGLIPAYFNISSVKS-TKDSGTIAGLNVLRIINEPT 153 (1023)
Q Consensus 81 ~~~~~~~v~a~~L~~~~~~~~~l~~~a-~~~~~~~~~-----~~vitVPa~~~~~qr~~-l~~Aa~~AGl~~~~li~Ep~ 153 (1023)
...+.+++++.+- .+.+.| ...+..+.+ .+|+-||-.|....-+. +.-.....||+-..++-|..
T Consensus 195 ~y~Slq~l~~dlt--------~il~yaL~e~L~Ip~~kl~qy~aVlVVpD~f~r~hveefl~ilL~eL~F~~~~v~QESl 266 (618)
T KOG0797|consen 195 PYYSLQRLCEDLT--------AILDYALLEKLHIPHKKLFQYHAVLVVPDTFDRRHVEEFLTILLGELGFNSAVVHQESL 266 (618)
T ss_pred cchhHHHHHHHHH--------HHHHHHHHHhcCCChhHhcceeEEEEecchhhHHHHHHHHHHHHHHhccceEEEEhhhh
Confidence 3456677777664 555555 334554443 58999999998777554 45556778999999999999
Q ss_pred HHHHHhccccccCccccccCCCCCcEEEEEEeCCceEEEEEEEEeCCEEEEEEecCCCCccHHHHHHHHHHHHHH
Q psy6736 154 AAAIAYGLDKKVGSTAVEYNGSGERNVLIFDLGGGTFDVSILTIEDGIFEVKSTAGDTHLGGEDFDNRMVNHFVQ 228 (1023)
Q Consensus 154 AAal~y~~~~~~~~~~~~~~~~~~~~vlV~D~GggT~dvsv~~~~~~~~~v~~~~~~~~lGG~~~D~~l~~~l~~ 228 (1023)
||.+..|+. .-.|||+|+-+|.++.++-+- . ...+.-....||.||++.|+-.+++
T Consensus 267 aatfGaGls----------------s~CVVdiGAQkTsIaCVEdGv--s-~~ntri~L~YGGdDitr~f~~ll~r 322 (618)
T KOG0797|consen 267 AATFGAGLS----------------SACVVDIGAQKTSIACVEDGV--S-LPNTRIILPYGGDDITRCFLWLLRR 322 (618)
T ss_pred HHHhcCCcc----------------ceeEEEccCcceeEEEeecCc--c-ccCceEEeccCCchHHHHHHHHHHh
Confidence 998766553 348999999999999887431 1 1111112468999999999866554
No 119
>KOG0677|consensus
Probab=96.01 E-value=0.049 Score=55.91 Aligned_cols=237 Identities=17% Similarity=0.176 Sum_probs=132.4
Q ss_pred chHHHHHHHH-HhC--CcCCcceEecCCCCCHHHHHHHHHH-HHHcCCceeeeecchHHHHHHhccccccCccccccCCC
Q psy6736 100 DILKKKTSED-ILR--KVDGQNEGLIPAYFNISSVKSTKDS-GTIAGLNVLRIINEPTAAAIAYGLDKKVGSTAVEYNGS 175 (1023)
Q Consensus 100 ~~~l~~~a~~-~~~--~~~~~~vitVPa~~~~~qr~~l~~A-a~~AGl~~~~li~Ep~AAal~y~~~~~~~~~~~~~~~~ 175 (1023)
+.++++++-- .++ ....++.+|-|+--....|+.|-+. .+..||.-+.+.-...-+.++-++.
T Consensus 83 M~h~WDytF~ekl~idp~~~KiLLTePPmNP~kNREKm~evMFEkY~F~gvyvaiQAVLtLYAQGL~------------- 149 (389)
T KOG0677|consen 83 MEHVWDYTFGEKLKIDPTNCKILLTEPPMNPTKNREKMIEVMFEKYGFGGVYVAIQAVLTLYAQGLL------------- 149 (389)
T ss_pred HHHHHHhhhhhhccCCCccCeEEeeCCCCCccccHHHHHHHHHHHcCCCeEEehHHHHHHHHHhccc-------------
Confidence 3577776622 232 2334689999998888888887665 5778998766654444443333322
Q ss_pred CCcEEEEEEeCCceEEEEEEEEeCCEEEEEEecCCCCccHHHHHHHHHHHHHHHHHhhhccCccccHHHHHHHHHHHHHH
Q psy6736 176 GERNVLIFDLGGGTFDVSILTIEDGIFEVKSTAGDTHLGGEDFDNRMVNHFVQEFKRKYKKDLTTNKRALRRLRTACERA 255 (1023)
Q Consensus 176 ~~~~vlV~D~GggT~dvsv~~~~~~~~~v~~~~~~~~lGG~~~D~~l~~~l~~~~~~~~~~~~~~~~~~~~~L~~~ae~~ 255 (1023)
.=+|+|-|.|-|.+.-+-- +-.+.-+ .+...+.|+|+++-|++.+..+=- ..+-..+ .......
T Consensus 150 ---tGvVvDSGDGVTHi~PVye-~~~l~HL--trRldvAGRdiTryLi~LLl~rGY---afN~tAD-------FETVR~i 213 (389)
T KOG0677|consen 150 ---TGVVVDSGDGVTHIVPVYE-GFVLPHL--TRRLDVAGRDITRYLIKLLLRRGY---AFNHTAD-------FETVREI 213 (389)
T ss_pred ---ceEEEecCCCeeEEeeeec-ceehhhh--hhhccccchhHHHHHHHHHHhhcc---ccccccc-------hHHHHHH
Confidence 2289999999888765432 1111111 233568999999999988775311 0111111 1122334
Q ss_pred hHHcCCC-----------CceEEEEe--cccCCceeEEEecHHHHH---HHhHHHH-----HHHHHHHHHHHHHcCCCc-
Q psy6736 256 KRTLSSS-----------TQASIEID--SLFEGVDFYTSITRARFE---ELNADLF-----RGTMEPVEKSLRDAKMDK- 313 (1023)
Q Consensus 256 K~~Ls~~-----------~~~~i~i~--~~~~~~~~~~~itr~~~e---~~~~~~~-----~~i~~~i~~~l~~~~~~~- 313 (1023)
|+.|..- .++.+-++ .+.+|.- +.+-.+.|+ .+++|-+ ..+.+++-.+++.+.+..
T Consensus 214 KEKLCYisYd~e~e~kLalETTvLv~~YtLPDGRv--IkvG~ERFeAPE~LFqP~Li~VE~~G~aellF~~iQaaDiD~R 291 (389)
T KOG0677|consen 214 KEKLCYISYDLELEQKLALETTVLVESYTLPDGRV--IKVGGERFEAPEALFQPHLINVEGPGVAELLFNTIQAADIDIR 291 (389)
T ss_pred HhhheeEeechhhhhHhhhhheeeeeeeecCCCcE--EEecceeccCchhhcCcceeccCCCcHHHHHHHHHHHhccchH
Confidence 4443211 11222222 2334432 344455554 4555533 234556666666665431
Q ss_pred -cCcCeEEEEcCCCCcHHHHHHHHHHcC---------Cc---------cccccCCCchhHHhHHHHHHHHHhC
Q psy6736 314 -AQIHDIVLVGGSTRIPKVQKLLQDFFN---------GK---------ELNKSINPDEAVAYGAAVQAAILHG 367 (1023)
Q Consensus 314 -~~i~~V~LvGG~sr~p~v~~~l~~~f~---------~~---------~i~~~~~pd~aVa~GAa~~a~~l~~ 367 (1023)
+=-.+|+|.||++--|.+-..|++.+. +. .+..+..-...|-.|.|..|.++..
T Consensus 292 ~~lYkhIVLSGGstMYPGLPSRLEkElkqlyl~rVL~~d~~~l~KfkiRIEdPPrRKhMVflGGAVLA~imkD 364 (389)
T KOG0677|consen 292 SELYKHIVLSGGSTMYPGLPSRLEKELKQLYLDRVLKGDTDKLKKFKIRIEDPPRRKHMVFLGGAVLAGIMKD 364 (389)
T ss_pred HHHHhHeeecCCcccCCCCcHHHHHHHHHHHHHHHHcCChhhhhheEEeccCCCccceeEEEchHHHHHHhcC
Confidence 223679999999999988777665431 11 1222223345788888888887764
No 120
>TIGR03192 benz_CoA_bzdQ benzoyl-CoA reductase, bzd-type, Q subunit. Members of this family are the Q subunit of one of two related types of four-subunit ATP-dependent benzoyl-CoA reductase. This enzyme system catalyzes the dearomatization of benzoyl-CoA, a common intermediate in pathways for the degradation for a number of different aromatic compounds, such as phenol and toluene.
Probab=95.75 E-value=0.022 Score=61.51 Aligned_cols=70 Identities=23% Similarity=0.286 Sum_probs=49.8
Q ss_pred HHHHHHHHHHHHHHHHHHHcCCCccccceEEEecCccCcHHHHHHHHHhhcCcccC-CCCCCccceecchHHHHHH
Q psy6736 747 LNADLFRGTMEPVEKSLRDAKMDKAQIHDIVLVGGSTRIPKVQKLLQDFFNGKELN-KSINPDEAVAYGAAVQAAI 821 (1023)
Q Consensus 747 ~~~~~~~~~~~~i~~~l~~~~~~~~~i~~V~LvGG~srip~v~~~l~~~f~~~~~~-~~~~p~~aVa~GAa~~a~~ 821 (1023)
++.-++..+.+.+...++..++. +.|+|.||.++.|.+++.+++.+ +.++. .+.+|+.+-|+|||++|..
T Consensus 218 I~aGl~~sia~rv~~~~~~~~i~----~~v~~~GGva~N~~l~~al~~~L-g~~v~~~p~~p~~~GAlGAAL~A~~ 288 (293)
T TIGR03192 218 VIAAYCQAMAERVVSLLERIGVE----EGFFITGGIAKNPGVVKRIERIL-GIKAVDTKIDSQIAGALGAALFGYT 288 (293)
T ss_pred HHHHHHHHHHHHHHHHhcccCCC----CCEEEECcccccHHHHHHHHHHh-CCCceeCCCCccHHHHHHHHHHHHH
Confidence 33344444444444444433322 35999999999999999999999 45555 5778999999999999954
No 121
>PF02782 FGGY_C: FGGY family of carbohydrate kinases, C-terminal domain; InterPro: IPR018485 It has been shown [] that four different type of carbohydrate kinases seem to be evolutionary related. These enzymes include L-fucolokinase (2.7.1.51 from EC) (gene fucK); gluconokinase (2.7.1.12 from EC) (gene gntK); glycerol kinase (2.7.1.30 from EC) (gene glpK); xylulokinase (2.7.1.17 from EC) (gene xylB); and L-xylulose kinase (2.7.1.53 from EC) (gene lyxK). These enzymes are proteins of from 480 to 520 amino acid residues. This entry represents the C-terminal domain of these proteins. It adopts a ribonuclease H-like fold and is structurally related to the N-terminal domain [, ].; GO: 0016773 phosphotransferase activity, alcohol group as acceptor, 0005975 carbohydrate metabolic process; PDB: 4E1J_B 2W40_C 2W41_A 2UYT_A 2CGK_B 2CGL_A 2CGJ_A 3GBT_A 3LL3_B 3HZ6_A ....
Probab=95.63 E-value=0.015 Score=60.27 Aligned_cols=76 Identities=25% Similarity=0.367 Sum_probs=55.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHcCCC-ccccceEEEecCccCcHHHHHHHHHhhcCcccCCCCCCccceecchHHHHHH
Q psy6736 744 FEELNADLFRGTMEPVEKSLRDAKMD-KAQIHDIVLVGGSTRIPKVQKLLQDFFNGKELNKSINPDEAVAYGAAVQAAI 821 (1023)
Q Consensus 744 ~~~~~~~~~~~~~~~i~~~l~~~~~~-~~~i~~V~LvGG~srip~v~~~l~~~f~~~~~~~~~~p~~aVa~GAa~~a~~ 821 (1023)
..++..-+++.+.-.++..++...-. ...++.|+++||.++.|.+.+++.+.| +.++....+ .++.|.|||+.|+.
T Consensus 120 ~~~~~rAv~Egia~~~~~~~~~l~~~~~~~~~~i~~~GG~~~n~~~~q~~Advl-~~~V~~~~~-~e~~a~GaA~~A~~ 196 (198)
T PF02782_consen 120 RADLARAVLEGIAFSLRQILEELEELTGIPIRRIRVSGGGAKNPLWMQILADVL-GRPVVRPEV-EEASALGAALLAAV 196 (198)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHTSCESEEEEESGGGGSHHHHHHHHHHH-TSEEEEESS-STHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhHHHHHHHhhhhccccccccceeeEeccccccChHHHHHHHHHh-CCceEeCCC-CchHHHHHHHHHHh
Confidence 45555666666665555555443111 234789999999999999999999999 566654444 89999999999964
No 122
>COG5277 Actin and related proteins [Cytoskeleton]
Probab=95.40 E-value=0.049 Score=63.08 Aligned_cols=48 Identities=27% Similarity=0.423 Sum_probs=39.1
Q ss_pred cceEEEecCccCcHHHHHHHHHhhcC-------cccCCCCCCccceecchHHHHH
Q psy6736 773 IHDIVLVGGSTRIPKVQKLLQDFFNG-------KELNKSINPDEAVAYGAAVQAA 820 (1023)
Q Consensus 773 i~~V~LvGG~srip~v~~~l~~~f~~-------~~~~~~~~p~~aVa~GAa~~a~ 820 (1023)
...|+|+||+|.+|.+...|.+.+.. ..+..+.+|...+=+||+++|.
T Consensus 363 ~~nivitGGts~~pg~~~Rl~~el~~~~p~~~~v~v~~~~~~~~~~W~GaSila~ 417 (444)
T COG5277 363 YSNIVLTGGTSKIPGFAERLQKELTSLAPSIWKVSVIPPPDPSLDAWLGASILAS 417 (444)
T ss_pred hhCEEEecCccCCCCHHHHHHHHHHhhcCCCCceeeecCCchhhccccchhhhcc
Confidence 46799999999999999999887632 2345566888999999999986
No 123
>PRK10719 eutA reactivating factor for ethanolamine ammonia lyase; Provisional
Probab=95.10 E-value=0.014 Score=66.42 Aligned_cols=117 Identities=14% Similarity=0.185 Sum_probs=66.8
Q ss_pred CCcceEEEEEeCCceEEEEEEEEeCCEEEEEEecCCCCCcHHHHHHHHHHHHHHHHHhhhccCcchhHHHHHHHHHHHHH
Q psy6736 632 SGERNVLIFDLGGGTFDVSILTIEDGIFEVKSTAGDTHLGGEDFDNRMVNHFVQEFKRKYKKDLTTNKRALRRLRTACER 711 (1023)
Q Consensus 632 ~~~~~vlV~D~GggT~dvsi~~~~~~~~~v~~~~gd~~lGG~~~D~~l~~~~~~~~~~~~~~~~~~~~~~~~~L~~~~e~ 711 (1023)
+++..++++|+||||+++++++ +|.+.-... ..+||+.+... -+ +.-....+. .+++.+ .
T Consensus 143 Eke~gVa~IDIGgGTT~iaVf~--~G~l~~T~~---l~vGG~~IT~D-~~----------~~i~yis~~-~~~l~~---~ 202 (475)
T PRK10719 143 ERNTRVLNIDIGGGTANYALFD--AGKVIDTAC---LNVGGRLIETD-SQ----------GRVTYISPP-GQMILD---E 202 (475)
T ss_pred hccCceEEEEeCCCceEEEEEE--CCEEEEEEE---EecccceEEEC-CC----------CCEEEEChH-HHHHHH---H
Confidence 7788899999999999999987 664433322 56899887532 10 000001111 122211 1
Q ss_pred HhhhcCCCceeEEEEecccCCcceEEEecHHHHHHHHHHHHHHHHHHHHH--------HHHHcCCC-ccccceEEEecCc
Q psy6736 712 AKRTLSSSTQASIEIDSLFEGVDFYTSITRARFEELNADLFRGTMEPVEK--------SLRDAKMD-KAQIHDIVLVGGS 782 (1023)
Q Consensus 712 ~K~~Ls~~~~~~~~i~~~~~~~~~~~~itr~~~~~~~~~~~~~~~~~i~~--------~l~~~~~~-~~~i~~V~LvGG~ 782 (1023)
+-..+.. --.++.+++..+|+-+.+-+.+.+.. ++....+. ...++.|.+.||-
T Consensus 203 ~~~~~~~-----------------G~~~~~~~L~~i~~~Ma~~l~~~i~~~~~~~~~~l~~~~~l~~~~~~~~i~fSGGV 265 (475)
T PRK10719 203 LGLAITD-----------------GRSLTGEQLQQVTRRMAELLVEVIGGALSPLAQALMTTKLLPAGVPPEIITFSGGV 265 (475)
T ss_pred cCCCccc-----------------cccCCHHHHHHHHHHHHHHHHHHhCCCCChhHHhhccCCCCCCCCCCCEEEEecch
Confidence 1111111 12467788888877776666655542 11111233 3578999999998
Q ss_pred cCc
Q psy6736 783 TRI 785 (1023)
Q Consensus 783 sri 785 (1023)
+..
T Consensus 266 ad~ 268 (475)
T PRK10719 266 GDC 268 (475)
T ss_pred Hhh
Confidence 765
No 124
>COG1069 AraB Ribulose kinase [Energy production and conversion]
Probab=95.09 E-value=0.24 Score=57.09 Aligned_cols=180 Identities=18% Similarity=0.200 Sum_probs=102.6
Q ss_pred EEEEEeCCceEEEEEEEEe-------CCEEEEEEecCCCCccHHHHHHHHHHHHHHHHH---------hhhccCccccHH
Q psy6736 180 VLIFDLGGGTFDVSILTIE-------DGIFEVKSTAGDTHLGGEDFDNRMVNHFVQEFK---------RKYKKDLTTNKR 243 (1023)
Q Consensus 180 vlV~D~GggT~dvsv~~~~-------~~~~~v~~~~~~~~lGG~~~D~~l~~~l~~~~~---------~~~~~~~~~~~~ 243 (1023)
-|++=+|-+|+++.+-+.. +.....+....-..=||..-.=.|.+||.+... .+.+.++.. .
T Consensus 270 ~l~~I~GTStC~m~~s~~~~~v~GvwGpy~~ai~Pg~~~~EgGQSatG~l~dhl~~~h~~~~e~~~~~~~~~~~~~~--~ 347 (544)
T COG1069 270 SLAMIAGTSTCHMLLSEKPRFVPGVWGPYDGAVLPGLWLYEGGQSATGDLLDHLVRTHPAPLEQLAAHPKDGEEIYE--S 347 (544)
T ss_pred eEEEEeccceEEEEecCCceecCccccccccccCcchhhhcccchhhhHHHHHHHHhCCcccchhhccchhhhHHHH--H
Confidence 4666678888887766532 112222222222234788778888888877632 111111111 1
Q ss_pred HHHHHHHHHHHHhHHcCCCCceEEEEecccCC------ce-------eEEEecHHHHHHHhHHHHHHHH---HHHHHHHH
Q psy6736 244 ALRRLRTACERAKRTLSSSTQASIEIDSLFEG------VD-------FYTSITRARFEELNADLFRGTM---EPVEKSLR 307 (1023)
Q Consensus 244 ~~~~L~~~ae~~K~~Ls~~~~~~i~i~~~~~~------~~-------~~~~itr~~~e~~~~~~~~~i~---~~i~~~l~ 307 (1023)
...++..-+++++...+... ....++.+..+ .+ +++.-+.+.+-.+....+..+. ..|-++++
T Consensus 348 ~~~~~~~l~~~~~~~~~l~~-~l~~l~~f~GNRsP~aDp~l~G~i~GltL~T~~~~l~~lY~a~l~a~A~GtR~Iie~~~ 426 (544)
T COG1069 348 LAQRLELLTEAAAAIPPLAS-GLHVLDWFNGNRSPLADPRLKGVITGLTLDTSPESLALLYRALLEATAFGTRAIIETFE 426 (544)
T ss_pred HHHHHHHHHhhHhccCcccC-CcEecccccCCcCCCCCccceeEEeccccCCCcHHHHHHHHHHHHHHHHhHHHHHHHHH
Confidence 23334444455555543222 12222222211 11 1222234434344444444443 45556666
Q ss_pred HcCCCccCcCeEEEEcCCCCcHHHHHHHHHHcCCccccccCCCchhHHhHHHHHHHHHhC
Q psy6736 308 DAKMDKAQIHDIVLVGGSTRIPKVQKLLQDFFNGKELNKSINPDEAVAYGAAVQAAILHG 367 (1023)
Q Consensus 308 ~~~~~~~~i~~V~LvGG~sr~p~v~~~l~~~f~~~~i~~~~~pd~aVa~GAa~~a~~l~~ 367 (1023)
+.++. |+.|+..||-.+.|.+.+.+.+.. +.++..+ ..+++++.|+|+.|+.-.+
T Consensus 427 ~~g~~---Id~l~~sGG~~KN~llmql~aDvt-g~~v~i~-~s~~a~llGsAm~~avAag 481 (544)
T COG1069 427 DQGIA---IDTLFASGGIRKNPLLMQLYADVT-GRPVVIP-ASDQAVLLGAAMFAAVAAG 481 (544)
T ss_pred HcCCe---eeEEEecCCcccCHHHHHHHHHhc-CCeEEee-cccchhhhHHHHHHHHHhc
Confidence 66654 799999999999999999999998 6777655 7789999999999876543
No 125
>PF14450 FtsA: Cell division protein FtsA; PDB: 1E4F_T 4A2B_A 4A2A_A 1E4G_T.
Probab=95.00 E-value=0.054 Score=51.08 Aligned_cols=52 Identities=17% Similarity=0.314 Sum_probs=29.4
Q ss_pred EEEEEeCCceEEEEEEEEe-CCEEEEEEecCCCCcc--HHHHH--HHHHHHHHHHHH
Q psy6736 180 VLIFDLGGGTFDVSILTIE-DGIFEVKSTAGDTHLG--GEDFD--NRMVNHFVQEFK 231 (1023)
Q Consensus 180 vlV~D~GggT~dvsv~~~~-~~~~~v~~~~~~~~lG--G~~~D--~~l~~~l~~~~~ 231 (1023)
++++|+|++++.+.+++.. .+.+.++..+.....| |..+. +.+..-+...+.
T Consensus 1 i~~iDiGs~~~~~~i~~~~~~~~~~vl~~g~~~s~gi~~g~Itd~~~i~~~i~~a~~ 57 (120)
T PF14450_consen 1 IVVIDIGSSKTKVAIAEDGSDGYIRVLGVGEVPSKGIKGGHITDIEDISKAIKIAIE 57 (120)
T ss_dssp EEEEEE-SSSEEEEEEETTEEEEEEEES----------HHHHH--HHHHHHHT--HH
T ss_pred CEEEEcCCCcEEEEEEEeCCCCcEEEEEEecccccccCCCEEEEHHHHHHHHHHHHH
Confidence 5899999999999999973 3445554432211111 77777 666665555443
No 126
>PLN02669 xylulokinase
Probab=94.92 E-value=0.075 Score=64.19 Aligned_cols=72 Identities=19% Similarity=0.308 Sum_probs=52.5
Q ss_pred HhHHHHHHHHHHHHHHHHHcCCCccCcCeEEEEcCCCCcHHHHHHHHHHcCCccccccCCCchhHHhHHHHHHHH
Q psy6736 290 LNADLFRGTMEPVEKSLRDAKMDKAQIHDIVLVGGSTRIPKVQKLLQDFFNGKELNKSINPDEAVAYGAAVQAAI 364 (1023)
Q Consensus 290 ~~~~~~~~i~~~i~~~l~~~~~~~~~i~~V~LvGG~sr~p~v~~~l~~~f~~~~i~~~~~pd~aVa~GAa~~a~~ 364 (1023)
++..+++.+.-.++..++..+.. ..++.|+++||+|+++.+.+.+.+.| +.++...-. .++.|+|||+.|+.
T Consensus 421 ~~RAvlEg~a~~~r~~~~~l~~~-~~~~~i~~~GGgs~s~~w~Qi~ADVl-g~pV~~~~~-~ea~alGAA~~A~~ 492 (556)
T PLN02669 421 EVRAIIEGQFLSMRAHAERFGMP-VPPKRIIATGGASANQSILKLIASIF-GCDVYTVQR-PDSASLGAALRAAH 492 (556)
T ss_pred HHHHHHHHHHHHHHHHHHHHhCC-CCCcEEEEEcChhcCHHHHHHHHHHc-CCCeEecCC-CCchHHHHHHHHHH
Confidence 34445555554444444444332 34789999999999999999999999 677765544 47889999999975
No 127
>PRK15027 xylulokinase; Provisional
Probab=94.90 E-value=0.069 Score=63.70 Aligned_cols=80 Identities=19% Similarity=0.249 Sum_probs=56.2
Q ss_pred cHHHHHHH-hHHHHHHHHHHHHHHHHHcCCCccCcCeEEEEcCCCCcHHHHHHHHHHcCCccccccCCCchhHHhHHHHH
Q psy6736 283 TRARFEEL-NADLFRGTMEPVEKSLRDAKMDKAQIHDIVLVGGSTRIPKVQKLLQDFFNGKELNKSINPDEAVAYGAAVQ 361 (1023)
Q Consensus 283 tr~~~e~~-~~~~~~~i~~~i~~~l~~~~~~~~~i~~V~LvGG~sr~p~v~~~l~~~f~~~~i~~~~~pd~aVa~GAa~~ 361 (1023)
+|.+|-.. ++.+.-.+...+ +.+++.+. .++.|+++||+++++...+.+.+.+ +.++....+.+++.++|||+.
T Consensus 357 ~~~~l~rAvlEgia~~~~~~~-~~l~~~g~---~~~~i~~~GGga~s~~w~Qi~Adv~-g~pv~~~~~~~~~~a~GaA~l 431 (484)
T PRK15027 357 GPNELARAVLEGVGYALADGM-DVVHACGI---KPQSVTLIGGGARSEYWRQMLADIS-GQQLDYRTGGDVGPALGAARL 431 (484)
T ss_pred CHHHHHHHHHHHHHHHHHHHH-HHHHHcCC---CccEEEEeCcccCCHHHHHHHHHHh-CCeEEeecCCCcchHHHHHHH
Confidence 45555432 223322323333 34444443 3688999999999999999999999 788866667777899999999
Q ss_pred HHHHhC
Q psy6736 362 AAILHG 367 (1023)
Q Consensus 362 a~~l~~ 367 (1023)
|+.-.+
T Consensus 432 A~~~~G 437 (484)
T PRK15027 432 AQIAAN 437 (484)
T ss_pred HHHhcC
Confidence 986654
No 128
>TIGR01315 5C_CHO_kinase FGGY-family pentulose kinase. This model represents a subfamily of the FGGY family of carbohydrate kinases. This subfamily is closely related to a set of ribulose kinases, and many members are designated ribitol kinase. However, the member from Klebsiella pneumoniae, from a ribitol catabolism operon, accepts D-ribulose and to a lesser extent D-arabinitol and ribitol (PubMed:9639934 and JW Lengeler, personal communication); its annotation in GenBank as ribitol kinase is imprecise and may have affected public annotation of related proteins.
Probab=94.85 E-value=0.073 Score=64.32 Aligned_cols=85 Identities=19% Similarity=0.180 Sum_probs=62.1
Q ss_pred EecHHHHHHHhHHHHHHHHHHHHHHHHHcCCCccCcCeEEEEcCCCCcHHHHHHHHHHcCCccccccCCCchhHHhHHHH
Q psy6736 281 SITRARFEELNADLFRGTMEPVEKSLRDAKMDKAQIHDIVLVGGSTRIPKVQKLLQDFFNGKELNKSINPDEAVAYGAAV 360 (1023)
Q Consensus 281 ~itr~~~e~~~~~~~~~i~~~i~~~l~~~~~~~~~i~~V~LvGG~sr~p~v~~~l~~~f~~~~i~~~~~pd~aVa~GAa~ 360 (1023)
.-+|..+.+++..+++.+.-.++..++...-....++.|.++||.++++...+.+.+.+ +.++....+ .++.++|||+
T Consensus 409 ~~~~~~~~~~~rAvlEgiaf~~r~~~e~l~~~g~~~~~i~~~GGga~s~~w~Qi~ADvl-g~pV~~~~~-~e~~alGaA~ 486 (541)
T TIGR01315 409 DRSKDGLALLYYATMEFIAYGTRQIVEAMNTAGHTIKSIFMSGGQCQNPLLMQLIADAC-DMPVLIPYV-NEAVLHGAAM 486 (541)
T ss_pred CCChHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCccEEEEecCcccCHHHHHHHHHHH-CCeeEecCh-hHHHHHHHHH
Confidence 33566667777777777765555554433211224788999999999999999999999 788876644 5688999999
Q ss_pred HHHHHhC
Q psy6736 361 QAAILHG 367 (1023)
Q Consensus 361 ~a~~l~~ 367 (1023)
.|+.-.+
T Consensus 487 lA~~~~G 493 (541)
T TIGR01315 487 LGAKAAG 493 (541)
T ss_pred HHHHhcC
Confidence 9976544
No 129
>PF01968 Hydantoinase_A: Hydantoinase/oxoprolinase; InterPro: IPR002821 This family includes the enzymes hydantoinase and oxoprolinase (3.5.2.9 from EC). Both reactions involve the hydrolysis of 5-membered rings via hydrolysis of their internal imide bonds [].; GO: 0016787 hydrolase activity; PDB: 3C0B_C 3CET_B.
Probab=94.43 E-value=0.088 Score=57.95 Aligned_cols=69 Identities=17% Similarity=0.138 Sum_probs=13.5
Q ss_pred HHhHHHHHHHHHHHHHHHHHcCCCccCcCeEEEEcCCCCcHHHHHHHHHHcCCccccccCCCchhHHhHHHH
Q psy6736 289 ELNADLFRGTMEPVEKSLRDAKMDKAQIHDIVLVGGSTRIPKVQKLLQDFFNGKELNKSINPDEAVAYGAAV 360 (1023)
Q Consensus 289 ~~~~~~~~~i~~~i~~~l~~~~~~~~~i~~V~LvGG~sr~p~v~~~l~~~f~~~~i~~~~~pd~aVa~GAa~ 360 (1023)
.+++-..+++.+.|++.....+..+.+. .++.+||.+ |++...|.+.++-..+..+..|.-+-|.||++
T Consensus 215 ~i~~~~~~~m~~~i~~~~~~~g~~~~~~-~lv~~GG~g--~~~~~~la~~lg~~~v~~p~~~~v~~A~Ga~~ 283 (290)
T PF01968_consen 215 GIVRIANENMADAIREVSVERGYDPRDF-PLVAFGGAG--PLHAPELAEELGIPRVVPPHYAGVANAIGAAV 283 (290)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHT--EEEE--------------------------------------------
T ss_pred HHHHHHHHHHHHHHHHHHHhhCCCcccc-ccccccccc--cccccccccccccccccccccccccccccccc
Confidence 3444455555566666655556555432 255566665 67778888877444566666678899999985
No 130
>PRK15027 xylulokinase; Provisional
Probab=94.34 E-value=0.085 Score=62.93 Aligned_cols=78 Identities=21% Similarity=0.317 Sum_probs=55.5
Q ss_pred cHHHHHHHHHHHHHHHHHHHHH---HHHHcCCCccccceEEEecCccCcHHHHHHHHHhhcCcccCCCCCCccceecchH
Q psy6736 740 TRARFEELNADLFRGTMEPVEK---SLRDAKMDKAQIHDIVLVGGSTRIPKVQKLLQDFFNGKELNKSINPDEAVAYGAA 816 (1023)
Q Consensus 740 tr~~~~~~~~~~~~~~~~~i~~---~l~~~~~~~~~i~~V~LvGG~srip~v~~~l~~~f~~~~~~~~~~p~~aVa~GAa 816 (1023)
+|.+|-. .+++.+.-.++. .+++.+. .++.|+++||+++.+...+++.+.| +.++....+.+++.|+|||
T Consensus 357 ~~~~l~r---AvlEgia~~~~~~~~~l~~~g~---~~~~i~~~GGga~s~~w~Qi~Adv~-g~pv~~~~~~~~~~a~GaA 429 (484)
T PRK15027 357 GPNELAR---AVLEGVGYALADGMDVVHACGI---KPQSVTLIGGGARSEYWRQMLADIS-GQQLDYRTGGDVGPALGAA 429 (484)
T ss_pred CHHHHHH---HHHHHHHHHHHHHHHHHHHcCC---CccEEEEeCcccCCHHHHHHHHHHh-CCeEEeecCCCcchHHHHH
Confidence 4554443 444444333333 3444333 4788999999999999999999999 6777556667778999999
Q ss_pred HHHHHHhC
Q psy6736 817 VQAAILHG 824 (1023)
Q Consensus 817 ~~a~~l~~ 824 (1023)
+.|+.-.|
T Consensus 430 ~lA~~~~G 437 (484)
T PRK15027 430 RLAQIAAN 437 (484)
T ss_pred HHHHHhcC
Confidence 99987654
No 131
>PLN02669 xylulokinase
Probab=94.33 E-value=0.1 Score=62.94 Aligned_cols=72 Identities=21% Similarity=0.346 Sum_probs=52.8
Q ss_pred HHHHHHHHHHHHHHHHHHHcCCCccccceEEEecCccCcHHHHHHHHHhhcCcccCCCCCCccceecchHHHHHH
Q psy6736 747 LNADLFRGTMEPVEKSLRDAKMDKAQIHDIVLVGGSTRIPKVQKLLQDFFNGKELNKSINPDEAVAYGAAVQAAI 821 (1023)
Q Consensus 747 ~~~~~~~~~~~~i~~~l~~~~~~~~~i~~V~LvGG~srip~v~~~l~~~f~~~~~~~~~~p~~aVa~GAa~~a~~ 821 (1023)
+++.+++.+.-.++..++..+.. ..++.|+++||+|+.|.+.+.+.+.| +.++.....+ ++.|+|||+.|+.
T Consensus 421 ~~RAvlEg~a~~~r~~~~~l~~~-~~~~~i~~~GGgs~s~~w~Qi~ADVl-g~pV~~~~~~-ea~alGAA~~A~~ 492 (556)
T PLN02669 421 EVRAIIEGQFLSMRAHAERFGMP-VPPKRIIATGGASANQSILKLIASIF-GCDVYTVQRP-DSASLGAALRAAH 492 (556)
T ss_pred HHHHHHHHHHHHHHHHHHHHhCC-CCCcEEEEEcChhcCHHHHHHHHHHc-CCCeEecCCC-CchHHHHHHHHHH
Confidence 45555555555555555544332 34789999999999999999999999 5666554444 7889999999975
No 132
>PF06277 EutA: Ethanolamine utilisation protein EutA; InterPro: IPR009377 Proteins in this entry are EutA ethanolamine utilization proteins, reactivating factors for ethanolamine ammonia lyase, encoded by the ethanolamine utilization eut operon. The holoenzyme of adenosylcobalamin-dependent ethanolamine ammonia-lyase (EutBC, IPR0092462 from INTERPRO, IPR010628 from INTERPRO), which is part of the ethanolamine utilization pathway [, , ], undergoes suicidal inactivation during catalysis as well as inactivation in the absence of substrate. The inactivation involves the irreversible cleavage of the Co-C bond of the coenzyme. The inactivated holoenzyme undergoes rapid and continuous reactivation in the presence of ATP, Mg2+, and free adenosylcobalamin in permeabilised cells (in situ), homogenate, and cell extracts of Escherichia coli. The EutA protein is essential for reactivation. It was demonstrated with purified recombinant EutA that both the suicidally inactivated and O2-inactivated holoethanolamine ammonia lyase underwent rapid reactivation in vitro by EutA in the presence of adenosylcobalamin, ATP, and Mg2+ []. The inactive enzyme-cyanocobalamin complex was also activated in situ and in vitro by EutA under the same conditions. Thus EutA is believed to be the only component of the reactivating factor for ethanolamine ammonia lyase. Reactivation and activation occur through the exchange of modified coenzyme for free intact adenosylcobalamin []. Bacteria that harbor the ethanolamine utilization pathway can use ethanolamine as a source of carbon and nitrogen. For more information on the ethanolamine utilization pathway, please see IPR009194 from INTERPRO, IPR012408 from INTERPRO.
Probab=94.25 E-value=0.067 Score=61.00 Aligned_cols=74 Identities=27% Similarity=0.415 Sum_probs=47.1
Q ss_pred HHHHHHHHcccCCCCCCCCCCC---CCCCCCCCC-CCCCCCCCccCCCCcceEEEEEeCCceEEEEEEEEeCCEEEEEEe
Q psy6736 589 NPIITKLYQGSGGAPGGFPGAP---GAGAPPSGA-PGAGPGPTIEEGSGERNVLIFDLGGGTFDVSILTIEDGIFEVKST 664 (1023)
Q Consensus 589 ~pi~~r~~e~~g~~~~~~p~~~---~~~~~~~~~-~~~~~~~~~~~~~~~~~vlV~D~GggT~dvsi~~~~~~~~~v~~~ 664 (1023)
+++...+.+.+| .| +|+++.++- +|..+|+..-..+....|+=+|+||||+.+++++ .| ++.++
T Consensus 101 ~~v~~~Ls~~aG--------DFVVATAGPdLEsiiAgkGsGA~~~S~~~~~~V~NiDIGGGTtN~avf~--~G--~v~~T 168 (473)
T PF06277_consen 101 REVLHALSGFAG--------DFVVATAGPDLESIIAGKGSGAAALSKEHHTVVANIDIGGGTTNIAVFD--NG--EVIDT 168 (473)
T ss_pred HHHHHHHHHhcC--------CEEEEccCCCHHHHHhccCccHHHHhhhhCCeEEEEEeCCCceeEEEEE--CC--EEEEE
Confidence 445666666676 22 233433222 4455555444446677899999999999999987 55 34444
Q ss_pred cCCCCCcHHHH
Q psy6736 665 AGDTHLGGEDF 675 (1023)
Q Consensus 665 ~gd~~lGG~~~ 675 (1023)
+. .+.||+-|
T Consensus 169 ~c-l~IGGRLi 178 (473)
T PF06277_consen 169 AC-LDIGGRLI 178 (473)
T ss_pred EE-EeeccEEE
Confidence 44 66899865
No 133
>PRK00047 glpK glycerol kinase; Provisional
Probab=93.95 E-value=0.14 Score=61.40 Aligned_cols=51 Identities=22% Similarity=0.358 Sum_probs=43.4
Q ss_pred CcCeEEEEcCCCCcHHHHHHHHHHcCCccccccCCCchhHHhHHHHHHHHHhC
Q psy6736 315 QIHDIVLVGGSTRIPKVQKLLQDFFNGKELNKSINPDEAVAYGAAVQAAILHG 367 (1023)
Q Consensus 315 ~i~~V~LvGG~sr~p~v~~~l~~~f~~~~i~~~~~pd~aVa~GAa~~a~~l~~ 367 (1023)
.++.|.++||++++|...+.+.+.| +.++... +..++.++|||+.|+.-.+
T Consensus 403 ~~~~i~~~GGga~s~~w~Qi~ADvl-g~pV~~~-~~~e~~a~GaA~~A~~~~G 453 (498)
T PRK00047 403 RLKELRVDGGAVANNFLMQFQADIL-GVPVERP-VVAETTALGAAYLAGLAVG 453 (498)
T ss_pred CCceEEEecCcccCHHHHHHHHHhh-CCeeEec-CcccchHHHHHHHHhhhcC
Confidence 3688999999999999999999999 7888654 4567889999999976544
No 134
>TIGR01315 5C_CHO_kinase FGGY-family pentulose kinase. This model represents a subfamily of the FGGY family of carbohydrate kinases. This subfamily is closely related to a set of ribulose kinases, and many members are designated ribitol kinase. However, the member from Klebsiella pneumoniae, from a ribitol catabolism operon, accepts D-ribulose and to a lesser extent D-arabinitol and ribitol (PubMed:9639934 and JW Lengeler, personal communication); its annotation in GenBank as ribitol kinase is imprecise and may have affected public annotation of related proteins.
Probab=93.94 E-value=0.11 Score=62.95 Aligned_cols=83 Identities=19% Similarity=0.192 Sum_probs=62.1
Q ss_pred cHHHHHHHHHHHHHHHHHHHHHHHHHcCCCccccceEEEecCccCcHHHHHHHHHhhcCcccCCCCCCccceecchHHHH
Q psy6736 740 TRARFEELNADLFRGTMEPVEKSLRDAKMDKAQIHDIVLVGGSTRIPKVQKLLQDFFNGKELNKSINPDEAVAYGAAVQA 819 (1023)
Q Consensus 740 tr~~~~~~~~~~~~~~~~~i~~~l~~~~~~~~~i~~V~LvGG~srip~v~~~l~~~f~~~~~~~~~~p~~aVa~GAa~~a 819 (1023)
+|..+..++..+++.+.-.++..++...-....++.|.++||.++.|...+.+.+.+ +.++....+ .++.|+|||+.|
T Consensus 411 ~~~~~~~~~rAvlEgiaf~~r~~~e~l~~~g~~~~~i~~~GGga~s~~w~Qi~ADvl-g~pV~~~~~-~e~~alGaA~lA 488 (541)
T TIGR01315 411 SKDGLALLYYATMEFIAYGTRQIVEAMNTAGHTIKSIFMSGGQCQNPLLMQLIADAC-DMPVLIPYV-NEAVLHGAAMLG 488 (541)
T ss_pred ChHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCccEEEEecCcccCHHHHHHHHHHH-CCeeEecCh-hHHHHHHHHHHH
Confidence 566677777888887766655555543211224788999999999999999999999 677766555 457899999999
Q ss_pred HHHhC
Q psy6736 820 AILHG 824 (1023)
Q Consensus 820 ~~l~~ 824 (1023)
+.-.|
T Consensus 489 ~~~~G 493 (541)
T TIGR01315 489 AKAAG 493 (541)
T ss_pred HHhcC
Confidence 76544
No 135
>PRK04123 ribulokinase; Provisional
Probab=93.93 E-value=0.13 Score=62.39 Aligned_cols=73 Identities=21% Similarity=0.388 Sum_probs=52.0
Q ss_pred HhHHHHHHHHHHH---HHHHHHcCCCccCcCeEEEEcCC-CCcHHHHHHHHHHcCCccccccCCCchhHHhHHHHHHHHH
Q psy6736 290 LNADLFRGTMEPV---EKSLRDAKMDKAQIHDIVLVGGS-TRIPKVQKLLQDFFNGKELNKSINPDEAVAYGAAVQAAIL 365 (1023)
Q Consensus 290 ~~~~~~~~i~~~i---~~~l~~~~~~~~~i~~V~LvGG~-sr~p~v~~~l~~~f~~~~i~~~~~pd~aVa~GAa~~a~~l 365 (1023)
++..+++.+.-.+ .+.|++.+. .++.|.++||+ ++++.+.+.+.+.| +.++... .+.++.++|||+.|+.-
T Consensus 413 l~RAvlEgia~~~~~~~e~l~~~g~---~~~~i~~~GGg~s~s~~w~Qi~ADv~-g~pV~~~-~~~e~~alGaA~lA~~~ 487 (548)
T PRK04123 413 IYRALIEATAFGTRAIMECFEDQGV---PVEEVIAAGGIARKNPVLMQIYADVL-NRPIQVV-ASDQCPALGAAIFAAVA 487 (548)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHcCC---CcceEEEeCCCcccCHHHHHHHHHhc-CCceEec-CccccchHHHHHHHHHH
Confidence 3444444444333 333444433 46889999999 99999999999999 7887544 45678899999999865
Q ss_pred hC
Q psy6736 366 HG 367 (1023)
Q Consensus 366 ~~ 367 (1023)
.+
T Consensus 488 ~G 489 (548)
T PRK04123 488 AG 489 (548)
T ss_pred hc
Confidence 43
No 136
>TIGR01311 glycerol_kin glycerol kinase. This model describes glycerol kinase, a member of the FGGY family of carbohydrate kinases.
Probab=93.84 E-value=0.13 Score=61.42 Aligned_cols=51 Identities=25% Similarity=0.371 Sum_probs=43.5
Q ss_pred CcCeEEEEcCCCCcHHHHHHHHHHcCCccccccCCCchhHHhHHHHHHHHHhC
Q psy6736 315 QIHDIVLVGGSTRIPKVQKLLQDFFNGKELNKSINPDEAVAYGAAVQAAILHG 367 (1023)
Q Consensus 315 ~i~~V~LvGG~sr~p~v~~~l~~~f~~~~i~~~~~pd~aVa~GAa~~a~~l~~ 367 (1023)
.++.|.++||+++++...+.+.+.| +.++... +..++.|+|||+.|+.-.+
T Consensus 399 ~~~~i~~~GGga~s~~w~Qi~ADv~-g~pv~~~-~~~e~~alGaA~~a~~~~G 449 (493)
T TIGR01311 399 EITKLRVDGGMTNNNLLMQFQADIL-GVPVVRP-KVTETTALGAAYAAGLAVG 449 (493)
T ss_pred CCceEEEecccccCHHHHHHHHHhc-CCeeEec-CCCcchHHHHHHHHHhhcC
Confidence 3688999999999999999999999 7888654 5567889999999976544
No 137
>TIGR01312 XylB D-xylulose kinase. D-xylulose kinase (XylB) generally is found with xylose isomerase (XylA) and acts in xylose utilization.
Probab=93.75 E-value=0.18 Score=60.30 Aligned_cols=51 Identities=35% Similarity=0.599 Sum_probs=44.1
Q ss_pred CcCeEEEEcCCCCcHHHHHHHHHHcCCccccccCCCchhHHhHHHHHHHHHhC
Q psy6736 315 QIHDIVLVGGSTRIPKVQKLLQDFFNGKELNKSINPDEAVAYGAAVQAAILHG 367 (1023)
Q Consensus 315 ~i~~V~LvGG~sr~p~v~~~l~~~f~~~~i~~~~~pd~aVa~GAa~~a~~l~~ 367 (1023)
.++.|.++||.++++.+.+.+.+.| +.++... +..++.++|||+.|+.-.+
T Consensus 390 ~~~~i~~~GG~s~s~~~~Q~~Adv~-g~pv~~~-~~~e~~a~GaA~~a~~~~g 440 (481)
T TIGR01312 390 PIQSIRLIGGGAKSPAWRQMLADIF-GTPVDVP-EGEEGPALGAAILAAWALG 440 (481)
T ss_pred CcceEEEeccccCCHHHHHHHHHHh-CCceeec-CCCcchHHHHHHHHHHhcC
Confidence 4788999999999999999999999 7887655 4667899999999987654
No 138
>TIGR02628 fuculo_kin_coli L-fuculokinase. Members of this family are L-fuculokinase, from the clade that includes the L-fuculokinase of Escherichia coli. This enzyme catalyzes the second step in fucose catabolism. This family belongs to FGGY family of carbohydrate kinases (pfam02782, pfam00370). It is encoded by the kinase (K) gene of the fucose (fuc) operon.
Probab=93.56 E-value=0.17 Score=60.03 Aligned_cols=74 Identities=15% Similarity=0.223 Sum_probs=52.2
Q ss_pred HhHHHHHHHHHHHH---HHHHHcCCCccCcCeEEEEcCCCCcHHHHHHHHHHcCCccccccCCCchhHHhHHHHHHHHHh
Q psy6736 290 LNADLFRGTMEPVE---KSLRDAKMDKAQIHDIVLVGGSTRIPKVQKLLQDFFNGKELNKSINPDEAVAYGAAVQAAILH 366 (1023)
Q Consensus 290 ~~~~~~~~i~~~i~---~~l~~~~~~~~~i~~V~LvGG~sr~p~v~~~l~~~f~~~~i~~~~~pd~aVa~GAa~~a~~l~ 366 (1023)
++..+++.+.-.++ +.+++.+. ..++.|.++||++++|...+.+.+.| +.++...-+ .++.++|||+.|+.-.
T Consensus 367 l~rAvlEgia~~~r~~~e~l~~~~~--~~~~~i~~~GGga~s~~w~Qi~Adv~-g~pV~~~~~-~e~~~lGaA~~a~~a~ 442 (465)
T TIGR02628 367 IYRAALEGLTAQLKRNLQMLEQIGQ--FKASELLLVGGGSKNTLWNQIRANML-DIPVKVVDD-AETTVAGAAMFGFYGV 442 (465)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhcC--CCcceEEEecCccCCHHHHHHhhhhc-CCeeEeccC-CcchHHHHHHHHHHhc
Confidence 44444444433333 34444321 23688999999999999999999999 788865544 5788999999998654
Q ss_pred C
Q psy6736 367 G 367 (1023)
Q Consensus 367 ~ 367 (1023)
+
T Consensus 443 G 443 (465)
T TIGR02628 443 G 443 (465)
T ss_pred C
Confidence 4
No 139
>PTZ00294 glycerol kinase-like protein; Provisional
Probab=93.54 E-value=0.19 Score=60.27 Aligned_cols=50 Identities=26% Similarity=0.418 Sum_probs=43.1
Q ss_pred cCeEEEEcCCCCcHHHHHHHHHHcCCccccccCCCchhHHhHHHHHHHHHhC
Q psy6736 316 IHDIVLVGGSTRIPKVQKLLQDFFNGKELNKSINPDEAVAYGAAVQAAILHG 367 (1023)
Q Consensus 316 i~~V~LvGG~sr~p~v~~~l~~~f~~~~i~~~~~pd~aVa~GAa~~a~~l~~ 367 (1023)
++.|.++||.++++.+.+.+.+.| +.++... ...++.++|||+.|+.-.+
T Consensus 407 ~~~i~~~GG~a~s~~w~Qi~Adv~-g~pV~~~-~~~e~~alGaAl~aa~a~G 456 (504)
T PTZ00294 407 LNSLRVDGGLTKNKLLMQFQADIL-GKDIVVP-EMAETTALGAALLAGLAVG 456 (504)
T ss_pred cceEEEecccccCHHHHHHHHHHh-CCceEec-CcccchHHHHHHHHHhhcC
Confidence 688999999999999999999999 7888655 4556889999999986554
No 140
>PRK10331 L-fuculokinase; Provisional
Probab=93.49 E-value=0.18 Score=59.91 Aligned_cols=51 Identities=20% Similarity=0.287 Sum_probs=43.4
Q ss_pred CcCeEEEEcCCCCcHHHHHHHHHHcCCccccccCCCchhHHhHHHHHHHHHhC
Q psy6736 315 QIHDIVLVGGSTRIPKVQKLLQDFFNGKELNKSINPDEAVAYGAAVQAAILHG 367 (1023)
Q Consensus 315 ~i~~V~LvGG~sr~p~v~~~l~~~f~~~~i~~~~~pd~aVa~GAa~~a~~l~~ 367 (1023)
.++.|.++||+++++...+.+.+.+ +.++... +..++.++|||+.|+.-.+
T Consensus 389 ~~~~i~~~GGga~s~~w~Qi~Advl-g~pV~~~-~~~e~~a~GaA~la~~~~G 439 (470)
T PRK10331 389 KASELLLVGGGSRNALWNQIKANML-DIPIKVL-DDAETTVAGAAMFGWYGVG 439 (470)
T ss_pred CCceEEEEcccccCHHHHHHHHHhc-CCeeEec-CcccchHHHHHHHHHHhcC
Confidence 4789999999999999999999999 7888655 4557889999999976544
No 141
>COG1069 AraB Ribulose kinase [Energy production and conversion]
Probab=93.46 E-value=0.74 Score=53.23 Aligned_cols=181 Identities=19% Similarity=0.211 Sum_probs=99.9
Q ss_pred eEEEEEeCCceEEEEEEEEeC---C----EEEEEEecCCCCCcHHHHHHHHHHHHHHHHH---------hhhccCcchhH
Q psy6736 636 NVLIFDLGGGTFDVSILTIED---G----IFEVKSTAGDTHLGGEDFDNRMVNHFVQEFK---------RKYKKDLTTNK 699 (1023)
Q Consensus 636 ~vlV~D~GggT~dvsi~~~~~---~----~~~v~~~~gd~~lGG~~~D~~l~~~~~~~~~---------~~~~~~~~~~~ 699 (1023)
+-|++=+|-+||++.+-+-.. | ....+--+.-..=||..-.=+|.+||.+... .+++.++..
T Consensus 269 ~~l~~I~GTStC~m~~s~~~~~v~GvwGpy~~ai~Pg~~~~EgGQSatG~l~dhl~~~h~~~~e~~~~~~~~~~~~~~-- 346 (544)
T COG1069 269 GSLAMIAGTSTCHMLLSEKPRFVPGVWGPYDGAVLPGLWLYEGGQSATGDLLDHLVRTHPAPLEQLAAHPKDGEEIYE-- 346 (544)
T ss_pred CeEEEEeccceEEEEecCCceecCccccccccccCcchhhhcccchhhhHHHHHHHHhCCcccchhhccchhhhHHHH--
Confidence 345556788888887765321 1 1111111111223788888888888887642 122221111
Q ss_pred HHHHHHHHHHHHHhhhcCCCceeEEEEecccC------Ccce-------EEEecHHHHHHHHHHHHHHHH---HHHHHHH
Q psy6736 700 RALRRLRTACERAKRTLSSSTQASIEIDSLFE------GVDF-------YTSITRARFEELNADLFRGTM---EPVEKSL 763 (1023)
Q Consensus 700 ~~~~~L~~~~e~~K~~Ls~~~~~~~~i~~~~~------~~~~-------~~~itr~~~~~~~~~~~~~~~---~~i~~~l 763 (1023)
....++..-+++.+...+-... -..++.+.. +.+. ++.=+.+.+-.+....+.-+- ..|-+++
T Consensus 347 ~~~~~~~~l~~~~~~~~~l~~~-l~~l~~f~GNRsP~aDp~l~G~i~GltL~T~~~~l~~lY~a~l~a~A~GtR~Iie~~ 425 (544)
T COG1069 347 SLAQRLELLTEAAAAIPPLASG-LHVLDWFNGNRSPLADPRLKGVITGLTLDTSPESLALLYRALLEATAFGTRAIIETF 425 (544)
T ss_pred HHHHHHHHHHhhHhccCcccCC-cEecccccCCcCCCCCccceeEEeccccCCCcHHHHHHHHHHHHHHHHhHHHHHHHH
Confidence 2233444444555555432221 122222211 1111 222234433344444444332 3444555
Q ss_pred HHcCCCccccceEEEecCccCcHHHHHHHHHhhcCcccCCCCCCccceecchHHHHHHHhC
Q psy6736 764 RDAKMDKAQIHDIVLVGGSTRIPKVQKLLQDFFNGKELNKSINPDEAVAYGAAVQAAILHG 824 (1023)
Q Consensus 764 ~~~~~~~~~i~~V~LvGG~srip~v~~~l~~~f~~~~~~~~~~p~~aVa~GAa~~a~~l~~ 824 (1023)
++.++ .|+.|+..||-.+.|.+.+.+.+.. +.++..+ ..+++++.|+|++|+.-.+
T Consensus 426 ~~~g~---~Id~l~~sGG~~KN~llmql~aDvt-g~~v~i~-~s~~a~llGsAm~~avAag 481 (544)
T COG1069 426 EDQGI---AIDTLFASGGIRKNPLLMQLYADVT-GRPVVIP-ASDQAVLLGAAMFAAVAAG 481 (544)
T ss_pred HHcCC---eeeEEEecCCcccCHHHHHHHHHhc-CCeEEee-cccchhhhHHHHHHHHHhc
Confidence 66554 5789999999999999999999988 5555444 6688999999999986544
No 142
>TIGR01234 L-ribulokinase L-ribulokinase. This enzyme catalyzes the second step in arabinose catabolism. The most closely related protein subfamily outside the scope of this model includes ribitol kinase from E. coli.
Probab=93.30 E-value=0.22 Score=60.12 Aligned_cols=51 Identities=27% Similarity=0.479 Sum_probs=43.6
Q ss_pred CcCeEEEEcCC-CCcHHHHHHHHHHcCCccccccCCCchhHHhHHHHHHHHHhC
Q psy6736 315 QIHDIVLVGGS-TRIPKVQKLLQDFFNGKELNKSINPDEAVAYGAAVQAAILHG 367 (1023)
Q Consensus 315 ~i~~V~LvGG~-sr~p~v~~~l~~~f~~~~i~~~~~pd~aVa~GAa~~a~~l~~ 367 (1023)
.++.|.++||+ ++++.+.+.+.+.| +.+|....+ .++.|.|||+.|+.-.+
T Consensus 435 ~~~~i~~~GGg~a~s~~w~Qi~Adv~-g~pV~~~~~-~e~~a~GaA~lA~~~~G 486 (536)
T TIGR01234 435 PVEELMAAGGIARKNPVIMQIYADVT-NRPLQIVAS-DQAPALGAAIFAAVAAG 486 (536)
T ss_pred CcceEEEeCCccccCHHHHHHHHHhh-CCeeEeccC-CcchhHHHHHHHHHHcC
Confidence 47899999999 99999999999999 788866655 46889999999986554
No 143
>PLN02295 glycerol kinase
Probab=92.94 E-value=0.26 Score=59.27 Aligned_cols=51 Identities=24% Similarity=0.326 Sum_probs=43.5
Q ss_pred CcCeEEEEcCCCCcHHHHHHHHHHcCCccccccCCCchhHHhHHHHHHHHHhC
Q psy6736 315 QIHDIVLVGGSTRIPKVQKLLQDFFNGKELNKSINPDEAVAYGAAVQAAILHG 367 (1023)
Q Consensus 315 ~i~~V~LvGG~sr~p~v~~~l~~~f~~~~i~~~~~pd~aVa~GAa~~a~~l~~ 367 (1023)
.++.|.++||++++|...+.+.+.| +.++... +..++.|+|||+.|+.-.+
T Consensus 412 ~~~~i~~~GGga~s~~w~Qi~ADv~-g~pV~~~-~~~e~~alGaA~~A~~~~G 462 (512)
T PLN02295 412 GLFLLRVDGGATANNLLMQIQADLL-GSPVVRP-ADIETTALGAAYAAGLAVG 462 (512)
T ss_pred CcceEEEeccchhCHHHHHHHHHhc-CCceEec-CccccHHHHHHHHHHhhcC
Confidence 4788999999999999999999999 7888644 5567889999999876554
No 144
>KOG0679|consensus
Probab=92.81 E-value=0.35 Score=53.03 Aligned_cols=49 Identities=20% Similarity=0.323 Sum_probs=37.8
Q ss_pred ceEEEEEeCCceEEEEEEEEeCCEEEEEEecCCCCCcHHHHHHHHHHHHHHH
Q psy6736 635 RNVLIFDLGGGTFDVSILTIEDGIFEVKSTAGDTHLGGEDFDNRMVNHFVQE 686 (1023)
Q Consensus 635 ~~vlV~D~GggT~dvsi~~~~~~~~~v~~~~gd~~lGG~~~D~~l~~~~~~~ 686 (1023)
.+-||+|+|++++.||=+. +|.+--.+.-. .+|||+.++..+.+.|...
T Consensus 154 stalVvDiGa~~~svsPV~--DG~Vlqk~vvk-s~laGdFl~~~~~q~l~~~ 202 (426)
T KOG0679|consen 154 STALVVDIGATHTSVSPVH--DGYVLQKGVVK-SPLAGDFLNDQCRQLLEPK 202 (426)
T ss_pred CceEEEEecCCCceeeeee--cceEeeeeeEe-cccchHHHHHHHHHHHhhc
Confidence 4589999999999988765 55443334433 7899999999999988765
No 145
>TIGR00555 panK_eukar pantothenate kinase, eukaryotic/staphyloccocal type. This model describes a eukaryotic form of pantothenate kinase, characterized from the fungus Aspergillus nidulans and with similar forms known in several other eukaryotes. It also includes forms from several Gram-positive bacteria suggested to have originated from the eukaryotic form by lateral transfer. It differs in a number of biochemical properties (such as inhibition by acetyl-CoA) from most bacterial CoaA and lacks sequence similarity. This enzyme is the key regulatory step in the biosynthesis of coenzyme A (CoA).
Probab=92.78 E-value=0.63 Score=50.39 Aligned_cols=154 Identities=19% Similarity=0.228 Sum_probs=85.4
Q ss_pred ceEEEEEeCCceEEEEEEEEeCCEEEEEEecCCCCCcHHHHHHHHHHHHHHHHHhhhccCcchhHHHHHHHHHHHHHHhh
Q psy6736 635 RNVLIFDLGGGTFDVSILTIEDGIFEVKSTAGDTHLGGEDFDNRMVNHFVQEFKRKYKKDLTTNKRALRRLRTACERAKR 714 (1023)
Q Consensus 635 ~~vlV~D~GggT~dvsi~~~~~~~~~v~~~~gd~~lGG~~~D~~l~~~~~~~~~~~~~~~~~~~~~~~~~L~~~~e~~K~ 714 (1023)
..++++.+|.| +|+++++.. ...-..| ..+||-.|= -|+..+... .+ ...|.+.|++-
T Consensus 101 ~p~llvnIGsG---vSi~~v~~~--~~~Rv~G-t~iGGGTf~-GL~~LL~~~----------~~---~~el~~lA~~G-- 158 (279)
T TIGR00555 101 YPYLLVNIGTG---TSILYVDGD--NYERVGG-TSLGGGTFL-GLGKLLTGI----------QT---FDELLEMAQHG-- 158 (279)
T ss_pred CceEEEEecCC---eEEEEEcCc--cEEEEcC-ccccHHHHH-HHHHHHcCC----------CC---HHHHHHHHHcC--
Confidence 34899999887 788888766 4444455 568876654 555555411 01 12233322221
Q ss_pred hcCCCceeEEEEecccCCc----c-------------e----EEEecHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcccc
Q psy6736 715 TLSSSTQASIEIDSLFEGV----D-------------F----YTSITRARFEELNADLFRGTMEPVEKSLRDAKMDKAQI 773 (1023)
Q Consensus 715 ~Ls~~~~~~~~i~~~~~~~----~-------------~----~~~itr~~~~~~~~~~~~~~~~~i~~~l~~~~~~~~~i 773 (1023)
.+...++-+.+++.+. . + .-..+ =|+++..++.-+...|-. |.........+
T Consensus 159 ---~~~~vDl~V~dIYg~~y~~~~L~~d~iASsfGkv~~~~~~~~~~---~eDiAaSLl~mV~~nIg~-lA~~~a~~~~~ 231 (279)
T TIGR00555 159 ---DRTNVDLLVGDIYGGDYSESGLDGSLTASSFGKVLSKHLDQSFS---PEDIAASLLGLIGNNIGQ-IAYLCALRYNI 231 (279)
T ss_pred ---CCcccccccccccCCCCCCCCCCcceeeeccchhhccccccCCC---HHHHHHHHHHHHHHHHHH-HHHHHHHHcCC
Confidence 1122233333333210 0 0 00122 234444555544443222 11111123457
Q ss_pred ceEEEecC-ccCcHHHHHHHHHhh--cCcccCCCCCCccceecchHH
Q psy6736 774 HDIVLVGG-STRIPKVQKLLQDFF--NGKELNKSINPDEAVAYGAAV 817 (1023)
Q Consensus 774 ~~V~LvGG-~srip~v~~~l~~~f--~~~~~~~~~~p~~aVa~GAa~ 817 (1023)
..|+++|| .+..|.+++.+...+ -+.++..+.|+...+|.||++
T Consensus 232 ~~IvF~Gg~L~~~~~l~~~~~~~~~~~~~~~ifp~h~~y~gAlGAaL 278 (279)
T TIGR00555 232 DRIVFIGSFLRNNQLLMKVLSYATNFWSKKALFLEHEGYSGAIGALL 278 (279)
T ss_pred CeEEEECCcccCCHHHHHHHHHHHhhcCceEEEECCcchHHHhhhcc
Confidence 88999999 677999999998875 235667788999999999986
No 146
>TIGR01314 gntK_FGGY gluconate kinase, FGGY type. Gluconate is derived from glucose in two steps. This model describes one form of gluconate kinase, belonging to the FGGY family of carbohydrate kinases. Gluconate kinase phosphoryates gluconate for entry into the Entner-Douderoff pathway.
Probab=92.64 E-value=0.3 Score=58.57 Aligned_cols=51 Identities=20% Similarity=0.277 Sum_probs=43.3
Q ss_pred CcCeEEEEcCCCCcHHHHHHHHHHcCCccccccCCCchhHHhHHHHHHHHHhC
Q psy6736 315 QIHDIVLVGGSTRIPKVQKLLQDFFNGKELNKSINPDEAVAYGAAVQAAILHG 367 (1023)
Q Consensus 315 ~i~~V~LvGG~sr~p~v~~~l~~~f~~~~i~~~~~pd~aVa~GAa~~a~~l~~ 367 (1023)
.++.|.++||.++++...+.+.+.| +.++...- ..++.++|||+.|+.-.+
T Consensus 401 ~~~~i~~~GGga~s~~w~Qi~Adv~-g~pv~~~~-~~e~~a~GaA~la~~~~G 451 (505)
T TIGR01314 401 PLNMIQATGGFASSEVWRQMMSDIF-EQEIVVPE-SYESSCLGACILGLKALG 451 (505)
T ss_pred CCcEEEEecCcccCHHHHHHHHHHc-CCeeEecC-CCCcchHHHHHHHHHhcC
Confidence 4789999999999999999999999 78886554 446889999999976544
No 147
>PRK00047 glpK glycerol kinase; Provisional
Probab=92.64 E-value=0.23 Score=59.41 Aligned_cols=78 Identities=17% Similarity=0.235 Sum_probs=53.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHcC-CCccccceEEEecCccCcHHHHHHHHHhhcCcccCCCCCCccceecchHHHHHHHh
Q psy6736 745 EELNADLFRGTMEPVEKSLRDAK-MDKAQIHDIVLVGGSTRIPKVQKLLQDFFNGKELNKSINPDEAVAYGAAVQAAILH 823 (1023)
Q Consensus 745 ~~~~~~~~~~~~~~i~~~l~~~~-~~~~~i~~V~LvGG~srip~v~~~l~~~f~~~~~~~~~~p~~aVa~GAa~~a~~l~ 823 (1023)
..++..+++.+.-.++..++... .....++.|.++||.++.|...+++.+.| +.++... +..++.|+|||+.|+.-.
T Consensus 375 ~~l~rAvlEgia~~~r~~~e~l~~~~g~~~~~i~~~GGga~s~~w~Qi~ADvl-g~pV~~~-~~~e~~a~GaA~~A~~~~ 452 (498)
T PRK00047 375 EHIIRATLESIAYQTRDVLDAMQADSGIRLKELRVDGGAVANNFLMQFQADIL-GVPVERP-VVAETTALGAAYLAGLAV 452 (498)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhcCCCCceEEEecCcccCHHHHHHHHHhh-CCeeEec-CcccchHHHHHHHHhhhc
Confidence 33455555555544444443322 11224788999999999999999999999 5777544 455788999999997654
Q ss_pred C
Q psy6736 824 G 824 (1023)
Q Consensus 824 ~ 824 (1023)
|
T Consensus 453 G 453 (498)
T PRK00047 453 G 453 (498)
T ss_pred C
Confidence 4
No 148
>TIGR01311 glycerol_kin glycerol kinase. This model describes glycerol kinase, a member of the FGGY family of carbohydrate kinases.
Probab=92.62 E-value=0.21 Score=59.72 Aligned_cols=77 Identities=18% Similarity=0.227 Sum_probs=53.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHcC-CCccccceEEEecCccCcHHHHHHHHHhhcCcccCCCCCCccceecchHHHHHHHhC
Q psy6736 746 ELNADLFRGTMEPVEKSLRDAK-MDKAQIHDIVLVGGSTRIPKVQKLLQDFFNGKELNKSINPDEAVAYGAAVQAAILHG 824 (1023)
Q Consensus 746 ~~~~~~~~~~~~~i~~~l~~~~-~~~~~i~~V~LvGG~srip~v~~~l~~~f~~~~~~~~~~p~~aVa~GAa~~a~~l~~ 824 (1023)
.++..+++.+.-.++..++... .....++.|.++||.++.+...+++.+.| +.++.. .+..++.|+|||+.|+.-.|
T Consensus 372 ~l~rAvlEgia~~~~~~~~~l~~~~g~~~~~i~~~GGga~s~~w~Qi~ADv~-g~pv~~-~~~~e~~alGaA~~a~~~~G 449 (493)
T TIGR01311 372 HIARAALEAIAFQTRDVLEAMEKDAGVEITKLRVDGGMTNNNLLMQFQADIL-GVPVVR-PKVTETTALGAAYAAGLAVG 449 (493)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhcCCCCceEEEecccccCHHHHHHHHHhc-CCeeEe-cCCCcchHHHHHHHHHhhcC
Confidence 3444555555444444443321 11224788999999999999999999999 677654 34467889999999976544
No 149
>TIGR02627 rhamnulo_kin rhamnulokinase. This model describes rhamnulokinase, an enzyme that catalyzes the second step in rhamnose catabolism.
Probab=92.61 E-value=0.26 Score=58.24 Aligned_cols=50 Identities=22% Similarity=0.290 Sum_probs=42.6
Q ss_pred CcCeEEEEcCCCCcHHHHHHHHHHcCCccccccCCCchhHHhHHHHHHHHHhC
Q psy6736 315 QIHDIVLVGGSTRIPKVQKLLQDFFNGKELNKSINPDEAVAYGAAVQAAILHG 367 (1023)
Q Consensus 315 ~i~~V~LvGG~sr~p~v~~~l~~~f~~~~i~~~~~pd~aVa~GAa~~a~~l~~ 367 (1023)
.++.|.++||++++++..+.+.+.+ +.++... +.++.|+|||+.|+.-.+
T Consensus 387 ~~~~i~~~GGga~s~~w~Qi~ADvl-g~pV~~~--~~e~~a~GaA~~a~~~~G 436 (454)
T TIGR02627 387 PISQLHIVGGGSQNAFLNQLCADAC-GIRVIAG--PVEASTLGNIGVQLMALD 436 (454)
T ss_pred CcCEEEEECChhhhHHHHHHHHHHh-CCceEcC--CchHHHHHHHHHHHHhcC
Confidence 3788999999999999999999999 7888543 367899999999986554
No 150
>TIGR01312 XylB D-xylulose kinase. D-xylulose kinase (XylB) generally is found with xylose isomerase (XylA) and acts in xylose utilization.
Probab=92.52 E-value=0.28 Score=58.51 Aligned_cols=78 Identities=28% Similarity=0.464 Sum_probs=53.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHHcC-CCccccceEEEecCccCcHHHHHHHHHhhcCcccCCCCCCccceecchHHHHHHHh
Q psy6736 745 EELNADLFRGTMEPVEKSLRDAK-MDKAQIHDIVLVGGSTRIPKVQKLLQDFFNGKELNKSINPDEAVAYGAAVQAAILH 823 (1023)
Q Consensus 745 ~~~~~~~~~~~~~~i~~~l~~~~-~~~~~i~~V~LvGG~srip~v~~~l~~~f~~~~~~~~~~p~~aVa~GAa~~a~~l~ 823 (1023)
..+...+++.+.-.++..++... .....++.|.++||.++.+.+.+++.+.| +.++... +..++.|+|||+.|+.-.
T Consensus 362 ~~l~railEgia~~~~~~~~~l~~~~~~~~~~i~~~GG~s~s~~~~Q~~Adv~-g~pv~~~-~~~e~~a~GaA~~a~~~~ 439 (481)
T TIGR01312 362 ADLTRAVLEGVTFALRDSLDILREAGGIPIQSIRLIGGGAKSPAWRQMLADIF-GTPVDVP-EGEEGPALGAAILAAWAL 439 (481)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhcCCCcceEEEeccccCCHHHHHHHHHHh-CCceeec-CCCcchHHHHHHHHHHhc
Confidence 33444555554444444433221 11124789999999999999999999999 5666544 466789999999998765
Q ss_pred C
Q psy6736 824 G 824 (1023)
Q Consensus 824 ~ 824 (1023)
+
T Consensus 440 g 440 (481)
T TIGR01312 440 G 440 (481)
T ss_pred C
Confidence 4
No 151
>PRK04123 ribulokinase; Provisional
Probab=92.44 E-value=0.27 Score=59.63 Aligned_cols=77 Identities=18% Similarity=0.324 Sum_probs=52.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHcCCCccccceEEEecCc-cCcHHHHHHHHHhhcCcccCCCCCCccceecchHHHHHHHhC
Q psy6736 746 ELNADLFRGTMEPVEKSLRDAKMDKAQIHDIVLVGGS-TRIPKVQKLLQDFFNGKELNKSINPDEAVAYGAAVQAAILHG 824 (1023)
Q Consensus 746 ~~~~~~~~~~~~~i~~~l~~~~~~~~~i~~V~LvGG~-srip~v~~~l~~~f~~~~~~~~~~p~~aVa~GAa~~a~~l~~ 824 (1023)
.++..+++.+.-.+...++...-....++.|.++||+ ++.+...+++.+.| +.++... .+.|+.|+|||+.|+.-.+
T Consensus 412 ~l~RAvlEgia~~~~~~~e~l~~~g~~~~~i~~~GGg~s~s~~w~Qi~ADv~-g~pV~~~-~~~e~~alGaA~lA~~~~G 489 (548)
T PRK04123 412 DIYRALIEATAFGTRAIMECFEDQGVPVEEVIAAGGIARKNPVLMQIYADVL-NRPIQVV-ASDQCPALGAAIFAAVAAG 489 (548)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHcCCCcceEEEeCCCcccCHHHHHHHHHhc-CCceEec-CccccchHHHHHHHHHHhc
Confidence 3455555555444433333222112247889999999 99999999999999 5666444 4567889999999986544
No 152
>TIGR01234 L-ribulokinase L-ribulokinase. This enzyme catalyzes the second step in arabinose catabolism. The most closely related protein subfamily outside the scope of this model includes ribitol kinase from E. coli.
Probab=92.41 E-value=0.29 Score=59.20 Aligned_cols=76 Identities=22% Similarity=0.316 Sum_probs=52.7
Q ss_pred HHHHHHHHHHHHHHHHHHHcCCCccccceEEEecCc-cCcHHHHHHHHHhhcCcccCCCCCCccceecchHHHHHHHhC
Q psy6736 747 LNADLFRGTMEPVEKSLRDAKMDKAQIHDIVLVGGS-TRIPKVQKLLQDFFNGKELNKSINPDEAVAYGAAVQAAILHG 824 (1023)
Q Consensus 747 ~~~~~~~~~~~~i~~~l~~~~~~~~~i~~V~LvGG~-srip~v~~~l~~~f~~~~~~~~~~p~~aVa~GAa~~a~~l~~ 824 (1023)
+...+++.+.-.++..++...-....++.|.++||. ++.+.+.+++.+.| +.++....+ .++.|+|||+.|+.-.|
T Consensus 410 ~~RAvlEgia~~~~~~l~~l~~~g~~~~~i~~~GGg~a~s~~w~Qi~Adv~-g~pV~~~~~-~e~~a~GaA~lA~~~~G 486 (536)
T TIGR01234 410 LYRALIEATAFGTRMIMETFTDSGVPVEELMAAGGIARKNPVIMQIYADVT-NRPLQIVAS-DQAPALGAAIFAAVAAG 486 (536)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhcCCCcceEEEeCCccccCHHHHHHHHHhh-CCeeEeccC-CcchhHHHHHHHHHHcC
Confidence 444455554433333333222112347899999999 99999999999999 677755555 46889999999987654
No 153
>TIGR02628 fuculo_kin_coli L-fuculokinase. Members of this family are L-fuculokinase, from the clade that includes the L-fuculokinase of Escherichia coli. This enzyme catalyzes the second step in fucose catabolism. This family belongs to FGGY family of carbohydrate kinases (pfam02782, pfam00370). It is encoded by the kinase (K) gene of the fucose (fuc) operon.
Probab=92.31 E-value=0.25 Score=58.54 Aligned_cols=76 Identities=14% Similarity=0.232 Sum_probs=53.3
Q ss_pred HHHHHHHHHHHHHHHHH---HHHHcCCCccccceEEEecCccCcHHHHHHHHHhhcCcccCCCCCCccceecchHHHHHH
Q psy6736 745 EELNADLFRGTMEPVEK---SLRDAKMDKAQIHDIVLVGGSTRIPKVQKLLQDFFNGKELNKSINPDEAVAYGAAVQAAI 821 (1023)
Q Consensus 745 ~~~~~~~~~~~~~~i~~---~l~~~~~~~~~i~~V~LvGG~srip~v~~~l~~~f~~~~~~~~~~p~~aVa~GAa~~a~~ 821 (1023)
..++..+++.+.-.++. .+++.+ ...++.|.++||+++.|...+++.+.| +.++....+ .++.++|||+.|+.
T Consensus 365 ~~l~rAvlEgia~~~r~~~e~l~~~~--~~~~~~i~~~GGga~s~~w~Qi~Adv~-g~pV~~~~~-~e~~~lGaA~~a~~ 440 (465)
T TIGR02628 365 GHIYRAALEGLTAQLKRNLQMLEQIG--QFKASELLLVGGGSKNTLWNQIRANML-DIPVKVVDD-AETTVAGAAMFGFY 440 (465)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhc--CCCcceEEEecCccCCHHHHHHhhhhc-CCeeEeccC-CcchHHHHHHHHHH
Confidence 33455555555444444 344332 123688999999999999999999999 577755544 46889999999986
Q ss_pred HhC
Q psy6736 822 LHG 824 (1023)
Q Consensus 822 l~~ 824 (1023)
-.+
T Consensus 441 a~G 443 (465)
T TIGR02628 441 GVG 443 (465)
T ss_pred hcC
Confidence 544
No 154
>COG4457 SrfB Uncharacterized protein conserved in bacteria, putative virulence factor [Function unknown]
Probab=92.30 E-value=2.1 Score=50.12 Aligned_cols=83 Identities=19% Similarity=0.276 Sum_probs=52.4
Q ss_pred EEEecHHHHHHHHHHH---HHHHHHHHHHHHHHcCCCccccceEEEecCccCcHHHHHHHHHhhcCc-------------
Q psy6736 736 YTSITRARFEELNADL---FRGTMEPVEKSLRDAKMDKAQIHDIVLVGGSTRIPKVQKLLQDFFNGK------------- 799 (1023)
Q Consensus 736 ~~~itr~~~~~~~~~~---~~~~~~~i~~~l~~~~~~~~~i~~V~LvGG~srip~v~~~l~~~f~~~------------- 799 (1023)
.+.|.-.++++.+-.. +......+-+++. --+-|.++|+|--||+|.|+..++...+-.
T Consensus 744 pl~i~~~ql~e~~ls~~~~i~~~f~al~EaIn-----~y~cDVlLlTGRPsrlPgvqalfr~~~pvp~~rilpl~~Yrvg 818 (1014)
T COG4457 744 PLAIDLSQLHECFLSGDYDITGVFDALCEAIN-----HYDCDVLLLTGRPSRLPGVQALFRHLQPVPVNRILPLDDYRVG 818 (1014)
T ss_pred ceeccHHHHHHHHhhCcccccchHHHHHHHHh-----hhcccEEEEcCCcccCccHHHHHhhcCCCCCCceEeccceecc
Confidence 3566666666543322 2222333333332 234578999999999999999998775311
Q ss_pred ------ccCCCCCCccceecchHHHHHHHh
Q psy6736 800 ------ELNKSINPDEAVAYGAAVQAAILH 823 (1023)
Q Consensus 800 ------~~~~~~~p~~aVa~GAa~~a~~l~ 823 (1023)
+-.+-.||...+|.||-+.+..+.
T Consensus 819 ~WYPF~k~grIddPKtTAaVGAMLC~Lsl~ 848 (1014)
T COG4457 819 TWYPFRKQGRIDDPKTTAAVGAMLCALSLE 848 (1014)
T ss_pred ceecccccCcCCCcchHHHHHHHHHHHHhh
Confidence 112334999999999988886543
No 155
>PF14450 FtsA: Cell division protein FtsA; PDB: 1E4F_T 4A2B_A 4A2A_A 1E4G_T.
Probab=92.29 E-value=0.42 Score=44.98 Aligned_cols=47 Identities=19% Similarity=0.364 Sum_probs=27.1
Q ss_pred EEEEEeCCceEEEEEEEE-eCCEEEEEEecCCCCCc--HHHHH--HHHHHHH
Q psy6736 637 VLIFDLGGGTFDVSILTI-EDGIFEVKSTAGDTHLG--GEDFD--NRMVNHF 683 (1023)
Q Consensus 637 vlV~D~GggT~dvsi~~~-~~~~~~v~~~~gd~~lG--G~~~D--~~l~~~~ 683 (1023)
|+++|+|++++.+.+.+. ..+.++++..+.-...| |..+. +.+.+-+
T Consensus 1 i~~iDiGs~~~~~~i~~~~~~~~~~vl~~g~~~s~gi~~g~Itd~~~i~~~i 52 (120)
T PF14450_consen 1 IVVIDIGSSKTKVAIAEDGSDGYIRVLGVGEVPSKGIKGGHITDIEDISKAI 52 (120)
T ss_dssp EEEEEE-SSSEEEEEEETTEEEEEEEES----------HHHHH--HHHHHHH
T ss_pred CEEEEcCCCcEEEEEEEeCCCCcEEEEEEecccccccCCCEEEEHHHHHHHH
Confidence 679999999999999996 44455666433211111 66666 5555433
No 156
>KOG2531|consensus
Probab=92.29 E-value=0.44 Score=53.43 Aligned_cols=56 Identities=21% Similarity=0.370 Sum_probs=46.9
Q ss_pred HHcCCCccCcCeEEEEcCCCCcHHHHHHHHHHcCCccccccCCCchhHHhHHHHHHHH
Q psy6736 307 RDAKMDKAQIHDIVLVGGSTRIPKVQKLLQDFFNGKELNKSINPDEAVAYGAAVQAAI 364 (1023)
Q Consensus 307 ~~~~~~~~~i~~V~LvGG~sr~p~v~~~l~~~f~~~~i~~~~~pd~aVa~GAa~~a~~ 364 (1023)
+.-+....+.+.|+.|||.||...|-+.|.+.| +.++..- +..++.+.|+|+.|+.
T Consensus 434 ~~lg~~~~~~~rilvtGGAS~N~~Ilq~iadVf-~apVy~~-~~~~sa~lG~A~ra~y 489 (545)
T KOG2531|consen 434 EPLGFKSNPPTRILVTGGASRNEAILQIIADVF-GAPVYTI-EGPNSAALGGAYRAAY 489 (545)
T ss_pred ccccCCCCCCceEEEecCccccHHHHHHHHHHh-CCCeEee-cCCchhhHHHHHHHHH
Confidence 344555667789999999999999999999999 7777644 8889999999999764
No 157
>PTZ00294 glycerol kinase-like protein; Provisional
Probab=92.23 E-value=0.28 Score=58.86 Aligned_cols=77 Identities=17% Similarity=0.258 Sum_probs=53.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHcCC-CccccceEEEecCccCcHHHHHHHHHhhcCcccCCCCCCccceecchHHHHHHHhC
Q psy6736 746 ELNADLFRGTMEPVEKSLRDAKM-DKAQIHDIVLVGGSTRIPKVQKLLQDFFNGKELNKSINPDEAVAYGAAVQAAILHG 824 (1023)
Q Consensus 746 ~~~~~~~~~~~~~i~~~l~~~~~-~~~~i~~V~LvGG~srip~v~~~l~~~f~~~~~~~~~~p~~aVa~GAa~~a~~l~~ 824 (1023)
.++..+++.+.-.++..++...- ....++.|.++||.++.+...+++.+.| +.++.... ..++.|+|||+.|+.-.|
T Consensus 379 ~i~rAvlEgia~~~r~~~~~l~~~~g~~~~~i~~~GG~a~s~~w~Qi~Adv~-g~pV~~~~-~~e~~alGaAl~aa~a~G 456 (504)
T PTZ00294 379 HIVRAALEAIALQTNDVIESMEKDAGIELNSLRVDGGLTKNKLLMQFQADIL-GKDIVVPE-MAETTALGAALLAGLAVG 456 (504)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhCCCcceEEEecccccCHHHHHHHHHHh-CCceEecC-cccchHHHHHHHHHhhcC
Confidence 34445555555444444433211 1123788999999999999999999999 66665444 556889999999986544
No 158
>PRK10939 autoinducer-2 (AI-2) kinase; Provisional
Probab=92.22 E-value=0.32 Score=58.56 Aligned_cols=51 Identities=25% Similarity=0.375 Sum_probs=43.3
Q ss_pred CcCeEEEEcCCCCcHHHHHHHHHHcCCccccccCCCchhHHhHHHHHHHHHhC
Q psy6736 315 QIHDIVLVGGSTRIPKVQKLLQDFFNGKELNKSINPDEAVAYGAAVQAAILHG 367 (1023)
Q Consensus 315 ~i~~V~LvGG~sr~p~v~~~l~~~f~~~~i~~~~~pd~aVa~GAa~~a~~l~~ 367 (1023)
.++.|.++||+++++...+.+.+.+ +.++....+ .++.++|||+.|+.-.+
T Consensus 409 ~~~~i~~~GGga~s~~w~Qi~ADvl-g~pV~~~~~-~e~~alGaA~lA~~~~G 459 (520)
T PRK10939 409 FPSSLVFAGGGSKGKLWSQILADVT-GLPVKVPVV-KEATALGCAIAAGVGAG 459 (520)
T ss_pred CCcEEEEeCCcccCHHHHHHHHHhc-CCeeEEecc-cCchHHHHHHHHHHHhC
Confidence 3788999999999999999999999 788876644 46789999999876544
No 159
>TIGR00555 panK_eukar pantothenate kinase, eukaryotic/staphyloccocal type. This model describes a eukaryotic form of pantothenate kinase, characterized from the fungus Aspergillus nidulans and with similar forms known in several other eukaryotes. It also includes forms from several Gram-positive bacteria suggested to have originated from the eukaryotic form by lateral transfer. It differs in a number of biochemical properties (such as inhibition by acetyl-CoA) from most bacterial CoaA and lacks sequence similarity. This enzyme is the key regulatory step in the biosynthesis of coenzyme A (CoA).
Probab=92.01 E-value=2.6 Score=45.76 Aligned_cols=72 Identities=18% Similarity=0.072 Sum_probs=48.3
Q ss_pred HHHhHHHHHHHHHHHHHHHHHcCCCccCcCeEEEEcC-CCCcHHHHHHHHHHc--CCccccccCCCchhHHhHHHH
Q psy6736 288 EELNADLFRGTMEPVEKSLRDAKMDKAQIHDIVLVGG-STRIPKVQKLLQDFF--NGKELNKSINPDEAVAYGAAV 360 (1023)
Q Consensus 288 e~~~~~~~~~i~~~i~~~l~~~~~~~~~i~~V~LvGG-~sr~p~v~~~l~~~f--~~~~i~~~~~pd~aVa~GAa~ 360 (1023)
|+++..++.-+...|-..-. .......+..|+++|| .+..|.+++.+...+ .+.++..+.|+...+|.||++
T Consensus 204 eDiAaSLl~mV~~nIg~lA~-~~a~~~~~~~IvF~Gg~L~~~~~l~~~~~~~~~~~~~~~ifp~h~~y~gAlGAaL 278 (279)
T TIGR00555 204 EDIAASLLGLIGNNIGQIAY-LCALRYNIDRIVFIGSFLRNNQLLMKVLSYATNFWSKKALFLEHEGYSGAIGALL 278 (279)
T ss_pred HHHHHHHHHHHHHHHHHHHH-HHHHHcCCCeEEEECCcccCCHHHHHHHHHHHhhcCceEEEECCcchHHHhhhcc
Confidence 34455555554443322211 1112345788999999 778999999998775 345677788999999999986
No 160
>PF01869 BcrAD_BadFG: BadF/BadG/BcrA/BcrD ATPase family; InterPro: IPR002731 This domain is found in the BadF (O07462 from SWISSPROT) and BadG (O07463 from SWISSPROT) proteins that are two subunits of Benzoyl-CoA reductase, that may be involved in ATP hydrolysis. The family also includes an activase subunit from the enzyme 2-hydroxyglutaryl-CoA dehydratase (P11568 from SWISSPROT). The hypothetical protein AQ_278 from Aquifex aeolicus O66634 from SWISSPROT contains two copies of this region suggesting that the family may structurally dimerise.; PDB: 2E2N_B 2E2Q_A 2E2P_B 2E2O_A 1ZBS_A 2CH6_A 2CH5_D 1ZC6_A 1HUX_A.
Probab=92.01 E-value=5 Score=43.77 Aligned_cols=71 Identities=25% Similarity=0.328 Sum_probs=48.7
Q ss_pred HHhHHHHHHHHHHHHHHHHHcCCCccCcCeEEEEcCCCCcHHHHHHHHHH----cCCccccccCCCchhHHhHHHHHH
Q psy6736 289 ELNADLFRGTMEPVEKSLRDAKMDKAQIHDIVLVGGSTRIPKVQKLLQDF----FNGKELNKSINPDEAVAYGAAVQA 362 (1023)
Q Consensus 289 ~~~~~~~~~i~~~i~~~l~~~~~~~~~i~~V~LvGG~sr~p~v~~~l~~~----f~~~~i~~~~~pd~aVa~GAa~~a 362 (1023)
+++....+.+.+.+..++........ .|+|+||..+.+.+++.+.+. .+..++..+..|....|.||+++|
T Consensus 197 ~Il~~a~~~la~~i~~~~~~~~~~~~---~v~l~GGv~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~a~GAallA 271 (271)
T PF01869_consen 197 DILAEAADELAELIKAVLKRLGPEKE---PVVLSGGVFKNSPLVKALRDALKEKLPKVPIIIPVEPQYDPAYGAALLA 271 (271)
T ss_dssp HHHHHHHHHHHHHHHHHHHTCTCCCC---SEEEESGGGGCHHHHHHHGGGS-HHHHCCTCECECCGSSHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHhcCCCCC---eEEEECCccCchHHHHHHHHHHHHhcCCCceEECCCCCccHHHHHHHhC
Confidence 34455555556666666665543321 299999999997777766443 334455667789999999999986
No 161
>KOG0676|consensus
Probab=91.93 E-value=0.12 Score=57.96 Aligned_cols=49 Identities=22% Similarity=0.302 Sum_probs=32.4
Q ss_pred ccceEEEecCccCcHHHHHHHHHhhcC-----cc--cCCCCCCccceecchHHHHH
Q psy6736 772 QIHDIVLVGGSTRIPKVQKLLQDFFNG-----KE--LNKSINPDEAVAYGAAVQAA 820 (1023)
Q Consensus 772 ~i~~V~LvGG~srip~v~~~l~~~f~~-----~~--~~~~~~p~~aVa~GAa~~a~ 820 (1023)
-...|+|+||+|-+|.+.+++.+.+.. .+ +..+.+...+|=.|+++.|.
T Consensus 290 L~~nivLsGGtT~~pGl~~Rl~kEl~~l~P~~~~ikv~~pp~r~~s~WlGgSIlas 345 (372)
T KOG0676|consen 290 LYENIVLSGGTTMFPGLADRLQKELQALAPSTIKIKVIAPPERKYSAWLGGSILAS 345 (372)
T ss_pred HHhheEEeCCcccchhHHHHHHHHHhhcCCCCcceEEecCcccccceecCceeEee
Confidence 346799999999999999988876521 11 22222223456677777764
No 162
>KOG2517|consensus
Probab=91.90 E-value=0.49 Score=54.99 Aligned_cols=73 Identities=22% Similarity=0.322 Sum_probs=54.8
Q ss_pred HHHHHHHHHHHHHHHHcCCCc-cCcCeEEEEcCCCCcHHHHHHHHHHcCCccccccCCCchhHHhHHHHHHHHHhC
Q psy6736 293 DLFRGTMEPVEKSLRDAKMDK-AQIHDIVLVGGSTRIPKVQKLLQDFFNGKELNKSINPDEAVAYGAAVQAAILHG 367 (1023)
Q Consensus 293 ~~~~~i~~~i~~~l~~~~~~~-~~i~~V~LvGG~sr~p~v~~~l~~~f~~~~i~~~~~pd~aVa~GAa~~a~~l~~ 367 (1023)
..++.+.--.+..|+...... ..|+.+.+.||.|+.|.+-+.+.+.+ +.++..+.++|. ++.|||+.|+..++
T Consensus 391 A~leai~fqtr~Il~am~~~~~~~i~~L~~~GG~s~N~ll~Q~~ADi~-g~pv~~p~~~e~-~~~GaA~l~~~a~~ 464 (516)
T KOG2517|consen 391 AALEAIAFQTREILEAMERDGGHPISTLRVCGGLSKNPLLMQLQADIL-GLPVVRPQDVEA-VALGAAMLAGAASG 464 (516)
T ss_pred HHHHHHHHHHHHHHHHHHHhcCCCcceeeeccccccCHHHHHHHHHHh-CCccccccchhH-HHHHHHHHHHhhcC
Confidence 444444433333333322222 45788999999999999999999999 689998888887 99999999988776
No 163
>PRK10331 L-fuculokinase; Provisional
Probab=91.77 E-value=0.33 Score=57.71 Aligned_cols=76 Identities=16% Similarity=0.235 Sum_probs=52.6
Q ss_pred HHHHHHHHHHHHHHHHHHHcC-CCccccceEEEecCccCcHHHHHHHHHhhcCcccCCCCCCccceecchHHHHHHHhC
Q psy6736 747 LNADLFRGTMEPVEKSLRDAK-MDKAQIHDIVLVGGSTRIPKVQKLLQDFFNGKELNKSINPDEAVAYGAAVQAAILHG 824 (1023)
Q Consensus 747 ~~~~~~~~~~~~i~~~l~~~~-~~~~~i~~V~LvGG~srip~v~~~l~~~f~~~~~~~~~~p~~aVa~GAa~~a~~l~~ 824 (1023)
+...+++.+.-.++..++... .....++.|.++||+++.|...+++.+.| +.++.... ..++.++|||+.|+.-.|
T Consensus 363 l~rAvlEgia~~~~~~~~~l~~~~~~~~~~i~~~GGga~s~~w~Qi~Advl-g~pV~~~~-~~e~~a~GaA~la~~~~G 439 (470)
T PRK10331 363 FYRAALEGLTAQLKRNLQVLEKIGHFKASELLLVGGGSRNALWNQIKANML-DIPIKVLD-DAETTVAGAAMFGWYGVG 439 (470)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhcCCCCceEEEEcccccCHHHHHHHHHhc-CCeeEecC-cccchHHHHHHHHHHhcC
Confidence 444555555444444443322 11234789999999999999999999999 56665444 456889999999976543
No 164
>PRK10640 rhaB rhamnulokinase; Provisional
Probab=91.76 E-value=0.37 Score=57.13 Aligned_cols=50 Identities=18% Similarity=0.205 Sum_probs=42.3
Q ss_pred CcCeEEEEcCCCCcHHHHHHHHHHcCCccccccCCCchhHHhHHHHHHHHHhC
Q psy6736 315 QIHDIVLVGGSTRIPKVQKLLQDFFNGKELNKSINPDEAVAYGAAVQAAILHG 367 (1023)
Q Consensus 315 ~i~~V~LvGG~sr~p~v~~~l~~~f~~~~i~~~~~pd~aVa~GAa~~a~~l~~ 367 (1023)
.++.|.++||+++++...+.+.+.+ +.++... . .++.+.|||+.|+.-.+
T Consensus 375 ~~~~i~~~GGga~s~~w~Qi~ADvl-g~pV~~~-~-~ea~alGaa~~a~~a~G 424 (471)
T PRK10640 375 PFSQLHIVGGGCQNALLNQLCADAC-GIRVIAG-P-VEASTLGNIGIQLMTLD 424 (471)
T ss_pred CcceEEEECChhhhHHHHHHHHHHh-CCCeeeC-C-hhHHHHHHHHHHHHHcC
Confidence 3688999999999999999999999 7888544 2 37999999999876554
No 165
>TIGR01314 gntK_FGGY gluconate kinase, FGGY type. Gluconate is derived from glucose in two steps. This model describes one form of gluconate kinase, belonging to the FGGY family of carbohydrate kinases. Gluconate kinase phosphoryates gluconate for entry into the Entner-Douderoff pathway.
Probab=91.57 E-value=0.38 Score=57.72 Aligned_cols=78 Identities=15% Similarity=0.178 Sum_probs=52.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHcC-CCccccceEEEecCccCcHHHHHHHHHhhcCcccCCCCCCccceecchHHHHHHHh
Q psy6736 745 EELNADLFRGTMEPVEKSLRDAK-MDKAQIHDIVLVGGSTRIPKVQKLLQDFFNGKELNKSINPDEAVAYGAAVQAAILH 823 (1023)
Q Consensus 745 ~~~~~~~~~~~~~~i~~~l~~~~-~~~~~i~~V~LvGG~srip~v~~~l~~~f~~~~~~~~~~p~~aVa~GAa~~a~~l~ 823 (1023)
..++..+++.+.-.+...+.... .....++.|.++||.++.+...+++.+.| +.++....+ .++.++|||+.|+.-.
T Consensus 373 ~~l~rAvlEgia~~~~~~~~~~~~~~g~~~~~i~~~GGga~s~~w~Qi~Adv~-g~pv~~~~~-~e~~a~GaA~la~~~~ 450 (505)
T TIGR01314 373 EHMIRAALEGVIYNLYTVALALVEVMGDPLNMIQATGGFASSEVWRQMMSDIF-EQEIVVPES-YESSCLGACILGLKAL 450 (505)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhcCCCCcEEEEecCcccCHHHHHHHHHHc-CCeeEecCC-CCcchHHHHHHHHHhc
Confidence 34455555555444443322210 01124789999999999999999999999 577755544 4688999999997654
Q ss_pred C
Q psy6736 824 G 824 (1023)
Q Consensus 824 ~ 824 (1023)
|
T Consensus 451 G 451 (505)
T TIGR01314 451 G 451 (505)
T ss_pred C
Confidence 4
No 166
>KOG0680|consensus
Probab=91.36 E-value=4.2 Score=43.87 Aligned_cols=105 Identities=10% Similarity=0.067 Sum_probs=59.3
Q ss_pred CCcceEecCCC-CCHHHHHHHHHHHHHcCCceeeeecchHHHHHHhccccccCccccccCCCCCcEEEEEEeCCceEEEE
Q psy6736 115 DGQNEGLIPAY-FNISSVKSTKDSGTIAGLNVLRIINEPTAAAIAYGLDKKVGSTAVEYNGSGERNVLIFDLGGGTFDVS 193 (1023)
Q Consensus 115 ~~~~vitVPa~-~~~~qr~~l~~Aa~~AGl~~~~li~Ep~AAal~y~~~~~~~~~~~~~~~~~~~~vlV~D~GggT~dvs 193 (1023)
...+|+|=|.+ |..-|.....-..+..++.- +..-+.|+..++-....... ..+. ......+|+|-|.+-|-+.
T Consensus 93 ~~~ivlTep~~~~psi~~~t~eilFEey~fd~--v~kttaa~lva~~~~~~~ne--~~tt-~~~~c~lVIDsGysfThIi 167 (400)
T KOG0680|consen 93 DHNIVLTEPCMTFPSIQEHTDEILFEEYQFDA--VLKTTAAVLVAFTKYVRNNE--DSTT-TSSECCLVIDSGYSFTHII 167 (400)
T ss_pred cceEEEecccccccchhhhHHHHHHHHhccce--EeecCHHHhcchhhhccCCc--cccc-cccceEEEEeCCCceEEEe
Confidence 35689999954 45556666666667777764 34444444444431111110 0111 2466899999999877654
Q ss_pred EEEEeCCEEEEEEecCCCCccHHHHHHHHHHHHH
Q psy6736 194 ILTIEDGIFEVKSTAGDTHLGGEDFDNRMVNHFV 227 (1023)
Q Consensus 194 v~~~~~~~~~v~~~~~~~~lGG~~~D~~l~~~l~ 227 (1023)
-+-.+.. ...+.- -..+||..++..|.+.+.
T Consensus 168 p~v~g~~--~~qaV~-RiDvGGK~LTn~LKE~iS 198 (400)
T KOG0680|consen 168 PVVKGIP--YYQAVK-RIDVGGKALTNLLKETIS 198 (400)
T ss_pred hhhcCcc--hhhceE-EeecchHHHHHHHHHHhh
Confidence 3322111 111111 257999999998877654
No 167
>PLN02295 glycerol kinase
Probab=90.76 E-value=0.49 Score=56.83 Aligned_cols=78 Identities=18% Similarity=0.237 Sum_probs=54.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHc----CC--CccccceEEEecCccCcHHHHHHHHHhhcCcccCCCCCCccceecchHHH
Q psy6736 745 EELNADLFRGTMEPVEKSLRDA----KM--DKAQIHDIVLVGGSTRIPKVQKLLQDFFNGKELNKSINPDEAVAYGAAVQ 818 (1023)
Q Consensus 745 ~~~~~~~~~~~~~~i~~~l~~~----~~--~~~~i~~V~LvGG~srip~v~~~l~~~f~~~~~~~~~~p~~aVa~GAa~~ 818 (1023)
..++..+++.+.-.++..++.. +. ....++.|.++||+++.|...+++.+.| +.++... +..++.|+|||+.
T Consensus 379 ~~l~RAvlEgia~~~r~~l~~l~~~~~~~~~~~~~~~i~~~GGga~s~~w~Qi~ADv~-g~pV~~~-~~~e~~alGaA~~ 456 (512)
T PLN02295 379 AHIARAVLESMCFQVKDVLDAMRKDAGEEKSHKGLFLLRVDGGATANNLLMQIQADLL-GSPVVRP-ADIETTALGAAYA 456 (512)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhhcccccCCCcceEEEeccchhCHHHHHHHHHhc-CCceEec-CccccHHHHHHHH
Confidence 3345555555554444444432 21 1234788999999999999999999999 6776443 4557889999999
Q ss_pred HHHHhC
Q psy6736 819 AAILHG 824 (1023)
Q Consensus 819 a~~l~~ 824 (1023)
|+.-.+
T Consensus 457 A~~~~G 462 (512)
T PLN02295 457 AGLAVG 462 (512)
T ss_pred HHhhcC
Confidence 976544
No 168
>PRK10939 autoinducer-2 (AI-2) kinase; Provisional
Probab=90.62 E-value=0.49 Score=56.99 Aligned_cols=51 Identities=25% Similarity=0.375 Sum_probs=42.6
Q ss_pred ccceEEEecCccCcHHHHHHHHHhhcCcccCCCCCCccceecchHHHHHHHhC
Q psy6736 772 QIHDIVLVGGSTRIPKVQKLLQDFFNGKELNKSINPDEAVAYGAAVQAAILHG 824 (1023)
Q Consensus 772 ~i~~V~LvGG~srip~v~~~l~~~f~~~~~~~~~~p~~aVa~GAa~~a~~l~~ 824 (1023)
.++.|.++||+++.+...+++.+.| +.++....+ .++.++|||+.|+.-.|
T Consensus 409 ~~~~i~~~GGga~s~~w~Qi~ADvl-g~pV~~~~~-~e~~alGaA~lA~~~~G 459 (520)
T PRK10939 409 FPSSLVFAGGGSKGKLWSQILADVT-GLPVKVPVV-KEATALGCAIAAGVGAG 459 (520)
T ss_pred CCcEEEEeCCcccCHHHHHHHHHhc-CCeeEEecc-cCchHHHHHHHHHHHhC
Confidence 4788999999999999999999999 677765554 46789999999976544
No 169
>KOG2517|consensus
Probab=90.58 E-value=0.58 Score=54.41 Aligned_cols=77 Identities=22% Similarity=0.321 Sum_probs=56.2
Q ss_pred HHHHHHHHHHHHHHHHHHHcCCCc-cccceEEEecCccCcHHHHHHHHHhhcCcccCCCCCCccceecchHHHHHHHhCC
Q psy6736 747 LNADLFRGTMEPVEKSLRDAKMDK-AQIHDIVLVGGSTRIPKVQKLLQDFFNGKELNKSINPDEAVAYGAAVQAAILHGD 825 (1023)
Q Consensus 747 ~~~~~~~~~~~~i~~~l~~~~~~~-~~i~~V~LvGG~srip~v~~~l~~~f~~~~~~~~~~p~~aVa~GAa~~a~~l~~~ 825 (1023)
+....++.+.--++..|+...... ..|+.+.+.||.|+.|.+.+.+.+.+ +.++..+.++|. |+.|||+.|+..++.
T Consensus 388 ia~A~leai~fqtr~Il~am~~~~~~~i~~L~~~GG~s~N~ll~Q~~ADi~-g~pv~~p~~~e~-~~~GaA~l~~~a~~~ 465 (516)
T KOG2517|consen 388 LARAALEAIAFQTREILEAMERDGGHPISTLRVCGGLSKNPLLMQLQADIL-GLPVVRPQDVEA-VALGAAMLAGAASGK 465 (516)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhcCCCcceeeeccccccCHHHHHHHHHHh-CCccccccchhH-HHHHHHHHHHhhcCC
Confidence 333444444433333333322222 46788999999999999999999999 588888888887 999999999887653
No 170
>COG1070 XylB Sugar (pentulose and hexulose) kinases [Carbohydrate transport and metabolism]
Probab=90.57 E-value=1 Score=53.83 Aligned_cols=78 Identities=24% Similarity=0.227 Sum_probs=48.0
Q ss_pred cHHHHHHHhHHHHHHHHHHHHHHHHHc-CCCccCcCeEEEEcCCCCcHHHHHHHHHHcCCccccccCCCchhHHhHHHHH
Q psy6736 283 TRARFEELNADLFRGTMEPVEKSLRDA-KMDKAQIHDIVLVGGSTRIPKVQKLLQDFFNGKELNKSINPDEAVAYGAAVQ 361 (1023)
Q Consensus 283 tr~~~e~~~~~~~~~i~~~i~~~l~~~-~~~~~~i~~V~LvGG~sr~p~v~~~l~~~f~~~~i~~~~~pd~aVa~GAa~~ 361 (1023)
+|.+|-..+-+-+.-......+.|++. +. .++.|.++||++|.++..+++.+.+ +.++..+.. .|+.+.|+|..
T Consensus 371 ~~~~l~ravlEgva~~l~~~~~~l~~~~g~---~~~~i~~~GGgars~~w~Qi~Ad~~-g~~v~~~~~-~e~~a~g~A~~ 445 (502)
T COG1070 371 TRAHLARAVLEGVAFALADGLEALEELGGK---PPSRVRVVGGGARSPLWLQILADAL-GLPVVVPEV-EEAGALGGAAL 445 (502)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHhcCC---CccEEEEECCcccCHHHHHHHHHHc-CCeeEecCc-ccchHHHHHHH
Confidence 555554333222222223333444444 33 3578999999999999999999999 788875534 45555555544
Q ss_pred HHHH
Q psy6736 362 AAIL 365 (1023)
Q Consensus 362 a~~l 365 (1023)
++..
T Consensus 446 ~~~~ 449 (502)
T COG1070 446 AAAA 449 (502)
T ss_pred HHHH
Confidence 4433
No 171
>TIGR02627 rhamnulo_kin rhamnulokinase. This model describes rhamnulokinase, an enzyme that catalyzes the second step in rhamnose catabolism.
Probab=90.42 E-value=0.44 Score=56.35 Aligned_cols=50 Identities=22% Similarity=0.290 Sum_probs=41.8
Q ss_pred ccceEEEecCccCcHHHHHHHHHhhcCcccCCCCCCccceecchHHHHHHHhC
Q psy6736 772 QIHDIVLVGGSTRIPKVQKLLQDFFNGKELNKSINPDEAVAYGAAVQAAILHG 824 (1023)
Q Consensus 772 ~i~~V~LvGG~srip~v~~~l~~~f~~~~~~~~~~p~~aVa~GAa~~a~~l~~ 824 (1023)
.++.|.++||+++.++..+++.+.+ +.++... +.++.|+|||+.|+.-.|
T Consensus 387 ~~~~i~~~GGga~s~~w~Qi~ADvl-g~pV~~~--~~e~~a~GaA~~a~~~~G 436 (454)
T TIGR02627 387 PISQLHIVGGGSQNAFLNQLCADAC-GIRVIAG--PVEASTLGNIGVQLMALD 436 (454)
T ss_pred CcCEEEEECChhhhHHHHHHHHHHh-CCceEcC--CchHHHHHHHHHHHHhcC
Confidence 4788999999999999999999999 6776433 367899999999987554
No 172
>PF01968 Hydantoinase_A: Hydantoinase/oxoprolinase; InterPro: IPR002821 This family includes the enzymes hydantoinase and oxoprolinase (3.5.2.9 from EC). Both reactions involve the hydrolysis of 5-membered rings via hydrolysis of their internal imide bonds [].; GO: 0016787 hydrolase activity; PDB: 3C0B_C 3CET_B.
Probab=90.27 E-value=0.81 Score=50.39 Aligned_cols=64 Identities=19% Similarity=0.167 Sum_probs=9.4
Q ss_pred HHHHHHHHHHHHHHHcCCCccccceEEEecCccCcHHHHHHHHHhhcCcccCCCCCCccceecchHH
Q psy6736 751 LFRGTMEPVEKSLRDAKMDKAQIHDIVLVGGSTRIPKVQKLLQDFFNGKELNKSINPDEAVAYGAAV 817 (1023)
Q Consensus 751 ~~~~~~~~i~~~l~~~~~~~~~i~~V~LvGG~srip~v~~~l~~~f~~~~~~~~~~p~~aVa~GAa~ 817 (1023)
..+.+.+.|++.....+..+.+ -.++.+||.+ |++-..|.+.++-..+..+..|.-+-|.||++
T Consensus 220 ~~~~m~~~i~~~~~~~g~~~~~-~~lv~~GG~g--~~~~~~la~~lg~~~v~~p~~~~v~~A~Ga~~ 283 (290)
T PF01968_consen 220 ANENMADAIREVSVERGYDPRD-FPLVAFGGAG--PLHAPELAEELGIPRVVPPHYAGVANAIGAAV 283 (290)
T ss_dssp HHHHHHHHHHHHHHHHT--EEE-E-------------------------------------------
T ss_pred HHHHHHHHHHHHHHhhCCCccc-cccccccccc--cccccccccccccccccccccccccccccccc
Confidence 3344445555554444555443 2355566665 67777777777545566666678888999884
No 173
>KOG2531|consensus
Probab=90.04 E-value=0.71 Score=51.81 Aligned_cols=55 Identities=24% Similarity=0.410 Sum_probs=45.2
Q ss_pred HcCCCccccceEEEecCccCcHHHHHHHHHhhcCcccCCCCCCccceecchHHHHHH
Q psy6736 765 DAKMDKAQIHDIVLVGGSTRIPKVQKLLQDFFNGKELNKSINPDEAVAYGAAVQAAI 821 (1023)
Q Consensus 765 ~~~~~~~~i~~V~LvGG~srip~v~~~l~~~f~~~~~~~~~~p~~aVa~GAa~~a~~ 821 (1023)
.-+......+.|+.|||.||...|-+.|.+.| +.++.. ++..++.|.|+|+.|+.
T Consensus 435 ~lg~~~~~~~rilvtGGAS~N~~Ilq~iadVf-~apVy~-~~~~~sa~lG~A~ra~y 489 (545)
T KOG2531|consen 435 PLGFKSNPPTRILVTGGASRNEAILQIIADVF-GAPVYT-IEGPNSAALGGAYRAAY 489 (545)
T ss_pred cccCCCCCCceEEEecCccccHHHHHHHHHHh-CCCeEe-ecCCchhhHHHHHHHHH
Confidence 34555557789999999999999999999999 566543 37888999999999864
No 174
>KOG0681|consensus
Probab=89.42 E-value=0.35 Score=55.16 Aligned_cols=67 Identities=19% Similarity=0.336 Sum_probs=49.9
Q ss_pred HHHHHHHHHHHcCCCccC--cCeEEEEcCCCCcHHHHHHHHHHcCC-------ccccccCCCchhHHhHHHHHHHH
Q psy6736 298 TMEPVEKSLRDAKMDKAQ--IHDIVLVGGSTRIPKVQKLLQDFFNG-------KELNKSINPDEAVAYGAAVQAAI 364 (1023)
Q Consensus 298 i~~~i~~~l~~~~~~~~~--i~~V~LvGG~sr~p~v~~~l~~~f~~-------~~i~~~~~pd~aVa~GAa~~a~~ 364 (1023)
+.+.+...|+.....-.. +..|+|+||+|.+|.+.+.|+..+-+ ..|....||-..+=+||+.+|+.
T Consensus 539 l~Ei~~~il~r~p~~eq~~lV~nVllTGG~s~~pGmkeRi~kElt~mrP~gS~i~V~rasdP~LDAW~GA~~~a~n 614 (645)
T KOG0681|consen 539 LAEIMDTILRRYPHDEQEKLVSNVLLTGGCSQLPGMKERIKKELTSMRPVGSSINVVRASDPVLDAWRGASAWAAN 614 (645)
T ss_pred HHHHHHHHHHhCchhhhHhhhhheEeecccccCcCHHHHHHHHhheecccCCceEEEecCCcchhhhhhhHHhhcC
Confidence 345555566554322222 78899999999999999999987622 34566779999999999999975
No 175
>PRK10640 rhaB rhamnulokinase; Provisional
Probab=88.95 E-value=0.64 Score=55.15 Aligned_cols=50 Identities=20% Similarity=0.261 Sum_probs=41.4
Q ss_pred ccceEEEecCccCcHHHHHHHHHhhcCcccCCCCCCccceecchHHHHHHHhC
Q psy6736 772 QIHDIVLVGGSTRIPKVQKLLQDFFNGKELNKSINPDEAVAYGAAVQAAILHG 824 (1023)
Q Consensus 772 ~i~~V~LvGG~srip~v~~~l~~~f~~~~~~~~~~p~~aVa~GAa~~a~~l~~ 824 (1023)
.++.|.++||+++.+...+++.+.+ +.++... +.++.++|||+.|+.-.|
T Consensus 375 ~~~~i~~~GGga~s~~w~Qi~ADvl-g~pV~~~--~~ea~alGaa~~a~~a~G 424 (471)
T PRK10640 375 PFSQLHIVGGGCQNALLNQLCADAC-GIRVIAG--PVEASTLGNIGIQLMTLD 424 (471)
T ss_pred CcceEEEECChhhhHHHHHHHHHHh-CCCeeeC--ChhHHHHHHHHHHHHHcC
Confidence 4688999999999999999999999 5676443 237889999999976554
No 176
>PRK11031 guanosine pentaphosphate phosphohydrolase; Provisional
Probab=85.08 E-value=1.8 Score=51.64 Aligned_cols=77 Identities=21% Similarity=0.305 Sum_probs=47.5
Q ss_pred HHHHHHHHHHcCCceeeeecchHHHHHHh-ccccccCccccccCCCCCcEEEEEEeCCceEEEEEEEEeCCEEEEEEecC
Q psy6736 131 VKSTKDSGTIAGLNVLRIINEPTAAAIAY-GLDKKVGSTAVEYNGSGERNVLIFDLGGGTFDVSILTIEDGIFEVKSTAG 209 (1023)
Q Consensus 131 r~~l~~Aa~~AGl~~~~li~Ep~AAal~y-~~~~~~~~~~~~~~~~~~~~vlV~D~GggT~dvsv~~~~~~~~~v~~~~~ 209 (1023)
...+.++-+..|+++ ++|+-.+=|-+.| +.....+ .....+|+|+|||+|.+++++-..... ..
T Consensus 94 ~~fl~~i~~~tGl~i-evIsG~eEA~l~~~gv~~~l~---------~~~~~lviDIGGGStEl~~~~~~~~~~-----~~ 158 (496)
T PRK11031 94 DEFLAKAQEILGCPV-QVISGEEEARLIYQGVAHTTG---------GADQRLVVDIGGASTELVTGTGAQATS-----LF 158 (496)
T ss_pred HHHHHHHHHHHCCCe-EEeCHHHHHHHHHHhhhhccC---------CCCCEEEEEecCCeeeEEEecCCceee-----ee
Confidence 344666667779998 5666555554544 4433221 223589999999999999876322111 22
Q ss_pred CCCccHHHHHHHH
Q psy6736 210 DTHLGGEDFDNRM 222 (1023)
Q Consensus 210 ~~~lGG~~~D~~l 222 (1023)
...+|...+.+.+
T Consensus 159 Sl~lG~vrl~e~f 171 (496)
T PRK11031 159 SLSMGCVTWLERY 171 (496)
T ss_pred EEeccchHHHHHh
Confidence 3578887766554
No 177
>PF07318 DUF1464: Protein of unknown function (DUF1464); InterPro: IPR009927 This family consists of several hypothetical archaeal proteins of around 350 residues in length. The function of this family is unknown.
Probab=84.97 E-value=8.5 Score=42.64 Aligned_cols=70 Identities=26% Similarity=0.403 Sum_probs=44.8
Q ss_pred HHHHHHHHHHHHHHHHcCCCccCcCeEEEEcCCCCcHHHHHHHHHHcCCc---cccccCCC----chhHHhHHHHHHHHH
Q psy6736 293 DLFRGTMEPVEKSLRDAKMDKAQIHDIVLVGGSTRIPKVQKLLQDFFNGK---ELNKSINP----DEAVAYGAAVQAAIL 365 (1023)
Q Consensus 293 ~~~~~i~~~i~~~l~~~~~~~~~i~~V~LvGG~sr~p~v~~~l~~~f~~~---~i~~~~~p----d~aVa~GAa~~a~~l 365 (1023)
.+++.+.+.|...+. ...+++.|+|.|-.+++|-+.+.+++.|.+. ++ ..+.+ -...|.|||+.|.-+
T Consensus 242 a~~E~i~k~V~~l~~----~~~~~~~IilSGr~~~~~~~~~~l~~~l~~~~~~~v-~~l~~~~~~aKeaA~GaAiIA~gl 316 (343)
T PF07318_consen 242 AMIESIVKAVASLLA----SVPDPDEIILSGRFSRIPEFRKKLEDRLEDYFPVKV-RKLEGLARKAKEAAQGAAIIANGL 316 (343)
T ss_pred HHHHHHHHHHHHHhc----ccCCCCEEEEeccccccHHHHHHHHHHHHhhcccce-eecccccccchhhhhhHHHHhhhh
Confidence 344444444443332 2346788999999999999988888777321 12 12222 234889999998777
Q ss_pred hC
Q psy6736 366 HG 367 (1023)
Q Consensus 366 ~~ 367 (1023)
.+
T Consensus 317 aG 318 (343)
T PF07318_consen 317 AG 318 (343)
T ss_pred hc
Confidence 65
No 178
>PF02543 CmcH_NodU: Carbamoyltransferase; InterPro: IPR003696 The putative O-carbamoyltransferases (O-Cases) encoded by the nodU genes of Rhizobium fredii and Bradyrhizobium japonicum are involved in the synthesis of nodulation factors []. The cmcH genes of Nocardia lactamdurans and Streptomyces clavuligerus encode a functional 3'-hydroxymethylcephem O-carbamoyltransferase 2.1.3.7 from EC for cephamycin biosynthesis that shows significant similarity to the O-carbamoyltransferases [].; GO: 0003824 catalytic activity, 0009058 biosynthetic process; PDB: 3VES_A 3VER_A 3VEN_A 3VF2_A 3VEX_A 3VEW_A 3VET_A 3VEO_A 3VEZ_A 3VF4_A.
Probab=84.88 E-value=75 Score=36.17 Aligned_cols=83 Identities=19% Similarity=0.144 Sum_probs=56.7
Q ss_pred EEecHHHHHHHhHHHHHHHH-HHHHHHHHHcCCCccCcCe-EEEEcCCCCcHHHHHHHHHHcCCccccc-cCCCchhHHh
Q psy6736 280 TSITRARFEELNADLFRGTM-EPVEKSLRDAKMDKAQIHD-IVLVGGSTRIPKVQKLLQDFFNGKELNK-SINPDEAVAY 356 (1023)
Q Consensus 280 ~~itr~~~e~~~~~~~~~i~-~~i~~~l~~~~~~~~~i~~-V~LvGG~sr~p~v~~~l~~~f~~~~i~~-~~~pd~aVa~ 356 (1023)
..-.+.++...++..+++++ ..++.+++..+ ++. +.|.||.+..-..-..|.+..+-..+.. +.-.|.-+|.
T Consensus 131 ~~~~~~dlAa~~Q~~~E~~v~~~~~~~~~~~g-----~~~~L~laGGvaLN~~~N~~l~~~~~~~~v~V~Pa~gD~G~ai 205 (360)
T PF02543_consen 131 LTQRHADLAASAQKVLEEIVLHLVRHLLERTG-----IDNNLCLAGGVALNCKANGRLLEEPGFDNVFVPPAAGDAGLAI 205 (360)
T ss_dssp EESS-HHHHHHHHHHHHHHHHHHHHHHHHHHT-------SEEEEESGGGG-HHHHHHHHTSTT-SEEE--TTTSGGGHHH
T ss_pred ccchHHHHHHHHHHHHHHHHHHHHHHHHHHhC-----CCCeEEEechHHHHHHHHHHHHhcCCCCeEEECCCCCCcchHH
Confidence 34567777777787777665 55566666666 355 9999999999888888888743344443 3455899999
Q ss_pred HHHHHHHHHhC
Q psy6736 357 GAAVQAAILHG 367 (1023)
Q Consensus 357 GAa~~a~~l~~ 367 (1023)
|||+++....+
T Consensus 206 GaA~~~~~~~~ 216 (360)
T PF02543_consen 206 GAALYAWHELG 216 (360)
T ss_dssp HHHHHHHHHTT
T ss_pred HHHHHHHHHhc
Confidence 99999976543
No 179
>COG1070 XylB Sugar (pentulose and hexulose) kinases [Carbohydrate transport and metabolism]
Probab=84.47 E-value=2 Score=51.43 Aligned_cols=77 Identities=26% Similarity=0.325 Sum_probs=48.0
Q ss_pred cHHHHHHHHHHHHHHHHHHHH---HHHHHcCCCccccceEEEecCccCcHHHHHHHHHhhcCcccCCCCCCccceecchH
Q psy6736 740 TRARFEELNADLFRGTMEPVE---KSLRDAKMDKAQIHDIVLVGGSTRIPKVQKLLQDFFNGKELNKSINPDEAVAYGAA 816 (1023)
Q Consensus 740 tr~~~~~~~~~~~~~~~~~i~---~~l~~~~~~~~~i~~V~LvGG~srip~v~~~l~~~f~~~~~~~~~~p~~aVa~GAa 816 (1023)
+|.+|- +.+++.+.-.+. +.|++. ....++.|.++||++|.++..+++.+.+ +.++..+. ..|+.+.|+|
T Consensus 371 ~~~~l~---ravlEgva~~l~~~~~~l~~~--~g~~~~~i~~~GGgars~~w~Qi~Ad~~-g~~v~~~~-~~e~~a~g~A 443 (502)
T COG1070 371 TRAHLA---RAVLEGVAFALADGLEALEEL--GGKPPSRVRVVGGGARSPLWLQILADAL-GLPVVVPE-VEEAGALGGA 443 (502)
T ss_pred CHHHHH---HHHHHHHHHHHHHHHHHHHHh--cCCCccEEEEECCcccCHHHHHHHHHHc-CCeeEecC-cccchHHHHH
Confidence 454444 344444433333 344433 2234578999999999999999999999 56665443 3456656665
Q ss_pred HHHHHHh
Q psy6736 817 VQAAILH 823 (1023)
Q Consensus 817 ~~a~~l~ 823 (1023)
..++...
T Consensus 444 ~~~~~~~ 450 (502)
T COG1070 444 ALAAAAL 450 (502)
T ss_pred HHHHHHh
Confidence 5555443
No 180
>KOG0681|consensus
Probab=84.25 E-value=0.86 Score=52.20 Aligned_cols=49 Identities=18% Similarity=0.368 Sum_probs=41.3
Q ss_pred cceEEEecCccCcHHHHHHHHHhhcC-------cccCCCCCCccceecchHHHHHH
Q psy6736 773 IHDIVLVGGSTRIPKVQKLLQDFFNG-------KELNKSINPDEAVAYGAAVQAAI 821 (1023)
Q Consensus 773 i~~V~LvGG~srip~v~~~l~~~f~~-------~~~~~~~~p~~aVa~GAa~~a~~ 821 (1023)
+..|+|+||+|.+|.+.+.|.+.+.+ ..+....||-..+=+||+.+|+.
T Consensus 559 V~nVllTGG~s~~pGmkeRi~kElt~mrP~gS~i~V~rasdP~LDAW~GA~~~a~n 614 (645)
T KOG0681|consen 559 VSNVLLTGGCSQLPGMKERIKKELTSMRPVGSSINVVRASDPVLDAWRGASAWAAN 614 (645)
T ss_pred hhheEeecccccCcCHHHHHHHHhheecccCCceEEEecCCcchhhhhhhHHhhcC
Confidence 68899999999999999999987632 34566779998899999999865
No 181
>COG0248 GppA Exopolyphosphatase [Nucleotide transport and metabolism / Inorganic ion transport and metabolism]
Probab=83.00 E-value=8.9 Score=45.26 Aligned_cols=84 Identities=17% Similarity=0.131 Sum_probs=51.0
Q ss_pred hHHHHHHHHHhCCcCCcceEecCCCCCHHH------HHHHHHHHHHcCCceeeeecchHHHHHHhccccccCccccccCC
Q psy6736 101 ILKKKTSEDILRKVDGQNEGLIPAYFNISS------VKSTKDSGTIAGLNVLRIINEPTAAAIAYGLDKKVGSTAVEYNG 174 (1023)
Q Consensus 101 ~~l~~~a~~~~~~~~~~~vitVPa~~~~~q------r~~l~~Aa~~AGl~~~~li~Ep~AAal~y~~~~~~~~~~~~~~~ 174 (1023)
..|+..++-.-+..+..+ ..| -|..- -+.+..+-+..|+++--+=-|-+|--..+|.-...+
T Consensus 59 ~aL~~f~e~~~~~~~~~v-~~v---ATsA~R~A~N~~eFl~rv~~~~G~~ievIsGeeEArl~~lGv~~~~~-------- 126 (492)
T COG0248 59 SALKRFAELLDGFGAEEV-RVV---ATSALRDAPNGDEFLARVEKELGLPIEVISGEEEARLIYLGVASTLP-------- 126 (492)
T ss_pred HHHHHHHHHHhhCCCCEE-EEe---hhHHHHcCCCHHHHHHHHHHHhCCceEEeccHHHHHHHHHHHHhcCC--------
Confidence 455555554444455553 222 22333 355788888889988544445555444444443321
Q ss_pred CCCcEEEEEEeCCceEEEEEEEE
Q psy6736 175 SGERNVLIFDLGGGTFDVSILTI 197 (1023)
Q Consensus 175 ~~~~~vlV~D~GggT~dvsv~~~ 197 (1023)
.....+|+|+|||+|.+++..-
T Consensus 127 -~~~~~lv~DIGGGStEl~~g~~ 148 (492)
T COG0248 127 -RKGDGLVIDIGGGSTELVLGDN 148 (492)
T ss_pred -CCCCEEEEEecCCeEEEEEecC
Confidence 2566899999999999999874
No 182
>PF02541 Ppx-GppA: Ppx/GppA phosphatase family; InterPro: IPR003695 Exopolyphosphate phosphatase (Ppx) 3.6.1.11 from EC and guanosine pentaphosphate phosphatase (GppA) 3.6.1.40 from EC belong to the sugar kinase/actin/hsp70 superfamily [].; PDB: 3MDQ_A 1U6Z_A 1T6D_B 2J4R_B 1T6C_A 2FLO_B 3CER_B 3HI0_A.
Probab=82.24 E-value=2.1 Score=47.16 Aligned_cols=74 Identities=20% Similarity=0.438 Sum_probs=42.0
Q ss_pred HHHHHHHcCCceeeeecchHHHHHHh-ccccccCccccccCCCCCcEEEEEEeCCceEEEEEEEEeCCEEEEEEecCCCC
Q psy6736 134 TKDSGTIAGLNVLRIINEPTAAAIAY-GLDKKVGSTAVEYNGSGERNVLIFDLGGGTFDVSILTIEDGIFEVKSTAGDTH 212 (1023)
Q Consensus 134 l~~Aa~~AGl~~~~li~Ep~AAal~y-~~~~~~~~~~~~~~~~~~~~vlV~D~GggT~dvsv~~~~~~~~~v~~~~~~~~ 212 (1023)
+.+.-+..|+++ .+|+..+=|.+.| +..... ......+|+|+|||+|.+++++- +.+.- .....
T Consensus 77 ~~~i~~~tGi~i-~iIsgeeEa~l~~~gv~~~l---------~~~~~~lviDIGGGStEl~~~~~--~~~~~---~~Sl~ 141 (285)
T PF02541_consen 77 LDRIKKETGIDI-EIISGEEEARLSFLGVLSSL---------PPDKNGLVIDIGGGSTELILFEN--GKVVF---SQSLP 141 (285)
T ss_dssp HHHHHHHHSS-E-EEE-HHHHHHHHHHHHHHHS---------TTTSSEEEEEEESSEEEEEEEET--TEEEE---EEEES
T ss_pred HHHHHHHhCCce-EEecHHHHHHHHHHHHHhhc---------cccCCEEEEEECCCceEEEEEEC--CeeeE---eeeee
Confidence 444456679988 5555555444444 332221 13456899999999999998864 22211 12257
Q ss_pred ccHHHHHHHH
Q psy6736 213 LGGEDFDNRM 222 (1023)
Q Consensus 213 lGG~~~D~~l 222 (1023)
+|...+.+.+
T Consensus 142 lG~vrl~e~~ 151 (285)
T PF02541_consen 142 LGAVRLTERF 151 (285)
T ss_dssp --HHHHHHHH
T ss_pred hHHHHHHHHH
Confidence 8888876655
No 183
>PRK10854 exopolyphosphatase; Provisional
Probab=81.66 E-value=3.6 Score=49.27 Aligned_cols=76 Identities=21% Similarity=0.361 Sum_probs=46.1
Q ss_pred HHHHHHHHHcCCceeeeecchHHHHHHh-ccccccCccccccCCCCCcEEEEEEeCCceEEEEEEEEeCCEEEEEEecCC
Q psy6736 132 KSTKDSGTIAGLNVLRIINEPTAAAIAY-GLDKKVGSTAVEYNGSGERNVLIFDLGGGTFDVSILTIEDGIFEVKSTAGD 210 (1023)
Q Consensus 132 ~~l~~Aa~~AGl~~~~li~Ep~AAal~y-~~~~~~~~~~~~~~~~~~~~vlV~D~GggT~dvsv~~~~~~~~~v~~~~~~ 210 (1023)
..+.++-+..|+++ ++|+-.+=|.+.| +.....+ .....+|+|+|||+|.+++++-..... ..+
T Consensus 100 ~fl~~i~~~tGl~i-~vIsG~EEA~l~~~gv~~~l~---------~~~~~lvvDIGGGStEl~~~~~~~~~~-~~S---- 164 (513)
T PRK10854 100 DFLKRAEKVIPYPI-EIISGNEEARLIFMGVEHTQP---------EKGRKLVIDIGGGSTELVIGENFEPIL-VES---- 164 (513)
T ss_pred HHHHHHHHHHCCCe-EEeCHHHHHHHHHhhhhcccC---------CCCCeEEEEeCCCeEEEEEecCCCeeE-eEE----
Confidence 34555666679998 5666555555555 4433321 224689999999999999987432221 111
Q ss_pred CCccHHHHHHHH
Q psy6736 211 THLGGEDFDNRM 222 (1023)
Q Consensus 211 ~~lGG~~~D~~l 222 (1023)
..+|...+.+.+
T Consensus 165 ~~lG~vrl~e~f 176 (513)
T PRK10854 165 RRMGCVSFAQLY 176 (513)
T ss_pred EecceeeHHhhh
Confidence 267776665544
No 184
>TIGR00744 ROK_glcA_fam ROK family protein (putative glucokinase). This alignment models one branch of the ROK superfamily of proteins. The three members of the seed alignment for this model all have experimental evidence for activity as glucokinase, but the set of related proteins is crowded with paralogs of different or unknown function. Proteins scoring above the trusted_cutoff will show strong similarity to at least one known glucokinase and may be designated as putative glucokinases. However, definitive identification of glucokinases should be done only with extreme caution.
Probab=80.52 E-value=37 Score=37.81 Aligned_cols=71 Identities=23% Similarity=0.170 Sum_probs=41.7
Q ss_pred cCCcceEecCCCCCHHH------------HHHHHHHH-HHcCCceeeeecchHHHHHHhccccccCccccccCCCCCcEE
Q psy6736 114 VDGQNEGLIPAYFNISS------------VKSTKDSG-TIAGLNVLRIINEPTAAAIAYGLDKKVGSTAVEYNGSGERNV 180 (1023)
Q Consensus 114 ~~~~~vitVPa~~~~~q------------r~~l~~Aa-~~AGl~~~~li~Ep~AAal~y~~~~~~~~~~~~~~~~~~~~v 180 (1023)
.+..+.|++|..++... .-.+.+.. +..|++ +.+.|+..|+|++-....... ..+++
T Consensus 57 ~i~gIgva~pG~vd~~~g~~~~~~~~~w~~~~l~~~l~~~~~~p-v~v~NDa~~~alaE~~~g~~~---------~~~~~ 126 (318)
T TIGR00744 57 EIVAIGIGAPGPVNRQRGTVYFAVNLDWKQEPLKEKVEARVGLP-VVVENDANAAALGEYKKGAGK---------GARDV 126 (318)
T ss_pred ceEEEEEeccccccCCCCEEEecCCCCCCCCCHHHHHHHHHCCC-EEEechHHHHHHHHHHhcccC---------CCCcE
Confidence 35567788886553221 11233333 334776 579999999998654322111 34678
Q ss_pred EEEEeCCceEEEEEE
Q psy6736 181 LIFDLGGGTFDVSIL 195 (1023)
Q Consensus 181 lV~D~GggT~dvsv~ 195 (1023)
+++.+|.|- -.+++
T Consensus 127 ~~v~igtGi-G~giv 140 (318)
T TIGR00744 127 ICITLGTGL-GGGII 140 (318)
T ss_pred EEEEeCCcc-EEEEE
Confidence 889999874 55554
No 185
>PLN02666 5-oxoprolinase
Probab=80.13 E-value=16 Score=48.39 Aligned_cols=77 Identities=13% Similarity=0.123 Sum_probs=48.2
Q ss_pred ecHHHHHHHhHHHH-HHHHHHHHHHHHHcCCCccCcCeEEEEcCCCCcHHHHHHHHHHcCCccccccCCCchhHHhHHHH
Q psy6736 282 ITRARFEELNADLF-RGTMEPVEKSLRDAKMDKAQIHDIVLVGGSTRIPKVQKLLQDFFNGKELNKSINPDEAVAYGAAV 360 (1023)
Q Consensus 282 itr~~~e~~~~~~~-~~i~~~i~~~l~~~~~~~~~i~~V~LvGG~sr~p~v~~~l~~~f~~~~i~~~~~pd~aVa~GAa~ 360 (1023)
++-++..+-+..+. ..+.+.|+......+..+.+ -.++..||+ =|...-.|.+.++=..+..+.+|.-..|.|+++
T Consensus 454 ~~~e~aA~~i~~ia~~~m~~air~i~~~~G~dpr~-~~l~afGGa--gp~ha~~lA~~lgi~~vivP~~~gv~sA~G~~~ 530 (1275)
T PLN02666 454 MSVEEVALGFVRVANEAMCRPIRQLTEMKGYETAN-HALACFGGA--GPQHACAIARALGMSEVFVHRYCGILSAYGMGL 530 (1275)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCCC-ceEEEecCc--HHHHHHHHHHHcCCCEEEeCCCccHHHHHHHHh
Confidence 34445544333333 34445666666666666543 224444444 478888899999444577888999999999986
Q ss_pred H
Q psy6736 361 Q 361 (1023)
Q Consensus 361 ~ 361 (1023)
-
T Consensus 531 a 531 (1275)
T PLN02666 531 A 531 (1275)
T ss_pred h
Confidence 4
No 186
>PLN02920 pantothenate kinase 1
Probab=80.00 E-value=15 Score=41.55 Aligned_cols=50 Identities=12% Similarity=-0.086 Sum_probs=37.3
Q ss_pred ccccceEEEecCccCcH-HHHHHHHHhh-----cCcccCCCCCCccceecchHHHH
Q psy6736 770 KAQIHDIVLVGGSTRIP-KVQKLLQDFF-----NGKELNKSINPDEAVAYGAAVQA 819 (1023)
Q Consensus 770 ~~~i~~V~LvGG~srip-~v~~~l~~~f-----~~~~~~~~~~p~~aVa~GAa~~a 819 (1023)
..+++.|+++|...|.+ ..++.|.-.+ ++.+.....+....-|.||++..
T Consensus 295 ~~~ik~Ivf~G~fir~~~~tm~~ls~a~~fwS~g~~ka~FLrHeGYlGAlGAfl~~ 350 (398)
T PLN02920 295 RFGLKRIFFGGFFIRGHSYTMDTISVAVHFWSKGEAKAMFLRHEGFLGALGAFMSY 350 (398)
T ss_pred HcCCCEEEEEeecccCcHHHHHHHHHHHHHhccCceeEEEecCcchhHHHHHHHhc
Confidence 35689999999999998 7777554432 34556667788889999998655
No 187
>TIGR03706 exo_poly_only exopolyphosphatase. It appears that a single enzyme may act as both exopolyphosphatase (Ppx) and guanosine pentaphosphate phosphohydrolase (GppA) in a number of species. Members of the seed alignment use to define this exception-level model are encoded adjacent to a polyphosphate kinase 1 gene, and the trusted cutoff is set high enough (425) that no genome has a second hit. Therefore all members may be presumed to at least share exopolyphospatase activity, and may lack GppA activity. GppA acts in the stringent response.
Probab=79.50 E-value=6.4 Score=43.63 Aligned_cols=54 Identities=20% Similarity=0.368 Sum_probs=35.3
Q ss_pred HHHHHHHHcCCceeeeecchHHHHHHhc-cccccCccccccCCCCCcEEEEEEeCCceEEEEEEEE
Q psy6736 133 STKDSGTIAGLNVLRIINEPTAAAIAYG-LDKKVGSTAVEYNGSGERNVLIFDLGGGTFDVSILTI 197 (1023)
Q Consensus 133 ~l~~Aa~~AGl~~~~li~Ep~AAal~y~-~~~~~~~~~~~~~~~~~~~vlV~D~GggT~dvsv~~~ 197 (1023)
.+.+.-+..|+++ ++|+..+=|.+.|. ...... . ...+++|+|||+|.++++.-
T Consensus 90 ~~~~i~~~tgi~i-~visg~eEa~l~~~gv~~~~~---------~-~~~~v~DiGGGSte~~~~~~ 144 (300)
T TIGR03706 90 FLREAEAILGLPI-EVISGEEEARLIYLGVAHTLP---------I-ADGLVVDIGGGSTELILGKD 144 (300)
T ss_pred HHHHHHHHHCCCe-EEeChHHHHHHHHHHHHhCCC---------C-CCcEEEEecCCeEEEEEecC
Confidence 3444445679987 67777777766663 222211 1 12499999999999998763
No 188
>COG3426 Butyrate kinase [Energy production and conversion]
Probab=79.34 E-value=11 Score=40.08 Aligned_cols=49 Identities=24% Similarity=0.184 Sum_probs=36.8
Q ss_pred CccCcCeEEEEcCCCCcHHHHHHHHHHc---CCccccccCCCchhHHhHHHH
Q psy6736 312 DKAQIHDIVLVGGSTRIPKVQKLLQDFF---NGKELNKSINPDEAVAYGAAV 360 (1023)
Q Consensus 312 ~~~~i~~V~LvGG~sr~p~v~~~l~~~f---~~~~i~~~~~pd~aVa~GAa~ 360 (1023)
-+..+|.|+|+||.++...+-++|.+.. ....+.-.-|-.+|-|.||..
T Consensus 293 L~G~vDaIvLTGGiA~~~~f~~~I~~~v~~iapv~v~PGE~EleALA~G~lR 344 (358)
T COG3426 293 LKGKVDAIVLTGGIAYEKLFVDAIEDRVSWIAPVIVYPGEDELEALAEGALR 344 (358)
T ss_pred cCCCCCEEEEecchhhHHHHHHHHHHHHhhhcceEecCCchHHHHHHhhhHH
Confidence 3567899999999999999999998875 122333444566789999864
No 189
>PF01869 BcrAD_BadFG: BadF/BadG/BcrA/BcrD ATPase family; InterPro: IPR002731 This domain is found in the BadF (O07462 from SWISSPROT) and BadG (O07463 from SWISSPROT) proteins that are two subunits of Benzoyl-CoA reductase, that may be involved in ATP hydrolysis. The family also includes an activase subunit from the enzyme 2-hydroxyglutaryl-CoA dehydratase (P11568 from SWISSPROT). The hypothetical protein AQ_278 from Aquifex aeolicus O66634 from SWISSPROT contains two copies of this region suggesting that the family may structurally dimerise.; PDB: 2E2N_B 2E2Q_A 2E2P_B 2E2O_A 1ZBS_A 2CH6_A 2CH5_D 1ZC6_A 1HUX_A.
Probab=79.22 E-value=4.4 Score=44.20 Aligned_cols=70 Identities=26% Similarity=0.320 Sum_probs=45.6
Q ss_pred HHHHHHHHHHHHHHHHHHHcCCCccccceEEEecCccCcHHHHHHHHHhh----cCcccCCCCCCccceecchHHHH
Q psy6736 747 LNADLFRGTMEPVEKSLRDAKMDKAQIHDIVLVGGSTRIPKVQKLLQDFF----NGKELNKSINPDEAVAYGAAVQA 819 (1023)
Q Consensus 747 ~~~~~~~~~~~~i~~~l~~~~~~~~~i~~V~LvGG~srip~v~~~l~~~f----~~~~~~~~~~p~~aVa~GAa~~a 819 (1023)
+++...+.+.+.+..++........ .|+|+||..+.+.+++.+.+.+ +..++..+..|....|.|||++|
T Consensus 198 Il~~a~~~la~~i~~~~~~~~~~~~---~v~l~GGv~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~a~GAallA 271 (271)
T PF01869_consen 198 ILAEAADELAELIKAVLKRLGPEKE---PVVLSGGVFKNSPLVKALRDALKEKLPKVPIIIPVEPQYDPAYGAALLA 271 (271)
T ss_dssp HHHHHHHHHHHHHHHHHHTCTCCCC---SEEEESGGGGCHHHHHHHGGGS-HHHHCCTCECECCGSSHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHhcCCCCC---eEEEECCccCchHHHHHHHHHHHHhcCCCceEECCCCCccHHHHHHHhC
Confidence 3334444444555555554433222 2999999999977776664433 34445567789999999999986
No 190
>KOG0677|consensus
Probab=78.84 E-value=13 Score=38.84 Aligned_cols=173 Identities=21% Similarity=0.336 Sum_probs=91.4
Q ss_pred EEEEEeCCceEEEEEEEEeCCEEEEEEecCCCCCcHHHHHHHHHHHHHHHHHhhhccCcchhHHHHHHHHHHHHHHhhhc
Q psy6736 637 VLIFDLGGGTFDVSILTIEDGIFEVKSTAGDTHLGGEDFDNRMVNHFVQEFKRKYKKDLTTNKRALRRLRTACERAKRTL 716 (1023)
Q Consensus 637 vlV~D~GggT~dvsi~~~~~~~~~v~~~~gd~~lGG~~~D~~l~~~~~~~~~~~~~~~~~~~~~~~~~L~~~~e~~K~~L 716 (1023)
=+|+|-|.|-+.+.-+. .+ +....-.+...+.|+|+++-|++.+..+= |...-..+- +.....|+.|
T Consensus 151 GvVvDSGDGVTHi~PVy--e~-~~l~HLtrRldvAGRdiTryLi~LLl~rG---YafN~tADF-------ETVR~iKEKL 217 (389)
T KOG0677|consen 151 GVVVDSGDGVTHIVPVY--EG-FVLPHLTRRLDVAGRDITRYLIKLLLRRG---YAFNHTADF-------ETVREIKEKL 217 (389)
T ss_pred eEEEecCCCeeEEeeee--cc-eehhhhhhhccccchhHHHHHHHHHHhhc---cccccccch-------HHHHHHHhhh
Confidence 47899999988876443 11 11111122245789999999998877541 111111110 1222334433
Q ss_pred CCC-----------ceeEEEEe--cccCCcceEEEecHHHHHH---HHHHHH-----HHHHHHHHHHHHHcCCCc--ccc
Q psy6736 717 SSS-----------TQASIEID--SLFEGVDFYTSITRARFEE---LNADLF-----RGTMEPVEKSLRDAKMDK--AQI 773 (1023)
Q Consensus 717 s~~-----------~~~~~~i~--~~~~~~~~~~~itr~~~~~---~~~~~~-----~~~~~~i~~~l~~~~~~~--~~i 773 (1023)
+-- .++++-++ .+.+|. .+.+--+.|+. +++|-+ ..+-+++-.+++.+.++. +=-
T Consensus 218 CYisYd~e~e~kLalETTvLv~~YtLPDGR--vIkvG~ERFeAPE~LFqP~Li~VE~~G~aellF~~iQaaDiD~R~~lY 295 (389)
T KOG0677|consen 218 CYISYDLELEQKLALETTVLVESYTLPDGR--VIKVGGERFEAPEALFQPHLINVEGPGVAELLFNTIQAADIDIRSELY 295 (389)
T ss_pred eeEeechhhhhHhhhhheeeeeeeecCCCc--EEEecceeccCchhhcCcceeccCCCcHHHHHHHHHHHhccchHHHHH
Confidence 211 01111111 122333 23444555542 344322 123445555555554432 223
Q ss_pred ceEEEecCccCcHHHHHHHHHhhc---------C---------cccCCCCCCccceecchHHHHHHHhC
Q psy6736 774 HDIVLVGGSTRIPKVQKLLQDFFN---------G---------KELNKSINPDEAVAYGAAVQAAILHG 824 (1023)
Q Consensus 774 ~~V~LvGG~srip~v~~~l~~~f~---------~---------~~~~~~~~p~~aVa~GAa~~a~~l~~ 824 (1023)
.+|+|.||||--|.+...|++.+. + ..+..+..-...|=.|.|..|.++..
T Consensus 296 khIVLSGGstMYPGLPSRLEkElkqlyl~rVL~~d~~~l~KfkiRIEdPPrRKhMVflGGAVLA~imkD 364 (389)
T KOG0677|consen 296 KHIVLSGGSTMYPGLPSRLEKELKQLYLDRVLKGDTDKLKKFKIRIEDPPRRKHMVFLGGAVLAGIMKD 364 (389)
T ss_pred hHeeecCCcccCCCCcHHHHHHHHHHHHHHHHcCChhhhhheEEeccCCCccceeEEEchHHHHHHhcC
Confidence 679999999999998888776541 1 12223333457899999999987754
No 191
>KOG0680|consensus
Probab=78.62 E-value=17 Score=39.38 Aligned_cols=24 Identities=25% Similarity=0.560 Sum_probs=21.6
Q ss_pred cceEEEecCccCcHHHHHHHHHhh
Q psy6736 773 IHDIVLVGGSTRIPKVQKLLQDFF 796 (1023)
Q Consensus 773 i~~V~LvGG~srip~v~~~l~~~f 796 (1023)
+..|+++||++..|..++.|...+
T Consensus 318 ~~NIv~iGGn~~fPgF~~RL~~El 341 (400)
T KOG0680|consen 318 LENIVCIGGNSNFPGFRQRLAREL 341 (400)
T ss_pred HhcEEEecCccCCcchHHHHHHHH
Confidence 457999999999999999998876
No 192
>PF03702 UPF0075: Uncharacterised protein family (UPF0075); InterPro: IPR005338 Anhydro-N-acetylmuramic acid kinase catalyzes the specific phosphorylation of 1,6-anhydro-N-acetylmuramic acid (anhMurNAc) with the simultaneous cleavage of the 1,6-anhydro ring, generating MurNAc-6-P. It is also required for the utilisation of anhMurNAc, either imported from the medium, or derived from its own cell wall murein, and in so doing plays a role in cell wall recycling [, ]. ; GO: 0005524 ATP binding, 0016773 phosphotransferase activity, alcohol group as acceptor, 0006040 amino sugar metabolic process, 0009254 peptidoglycan turnover; PDB: 3QBX_B 3QBW_A 3CQY_B.
Probab=78.32 E-value=8.1 Score=43.72 Aligned_cols=73 Identities=23% Similarity=0.283 Sum_probs=44.6
Q ss_pred HHhHHHHHHHHHHHHHHHHHcCCCccCcCeEEEEcCCCCcHHHHHHHHHHcCCccccc----cCCCchhHHhHHHHHHHH
Q psy6736 289 ELNADLFRGTMEPVEKSLRDAKMDKAQIHDIVLVGGSTRIPKVQKLLQDFFNGKELNK----SINPDEAVAYGAAVQAAI 364 (1023)
Q Consensus 289 ~~~~~~~~~i~~~i~~~l~~~~~~~~~i~~V~LvGG~sr~p~v~~~l~~~f~~~~i~~----~~~pd~aVa~GAa~~a~~ 364 (1023)
++..-+.+-+...|.+.++..... ++.|+++||+++.|++.+.|++.+++.++.. .++|+.-=|.+-|++|..
T Consensus 261 D~~aTlt~~TA~sI~~~i~~~~~~---~~~v~v~GGGa~N~~L~~~L~~~l~~~~v~~~~~~gi~~~~~EA~aFA~La~~ 337 (364)
T PF03702_consen 261 DILATLTEFTAQSIADAIRRFPPQ---PDEVYVCGGGARNPFLMERLQERLPGIPVKTTDELGIPPDAKEAMAFAWLAYR 337 (364)
T ss_dssp HHHHHHHHHHHHHHHHHHHHH-TT----EEEEEESGGGG-HHHHHHHHHH-TTCEEEEGGGGTS-CCCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHhcCCC---CceEEEECCCcCCHHHHHHHHhhCCCCEEecHHHcCCCHHHHHHHHHHHHHHH
Confidence 344444444555666666654332 6899999999999999999999997755432 345554445555566654
No 193
>COG0554 GlpK Glycerol kinase [Energy production and conversion]
Probab=77.88 E-value=7 Score=44.87 Aligned_cols=74 Identities=19% Similarity=0.302 Sum_probs=53.5
Q ss_pred HHhHHHHHHHHHHHHHHH----HHcCCCccCcCeEEEEcCCCCcHHHHHHHHHHcCCccccccCCCchhHHhHHHHHHHH
Q psy6736 289 ELNADLFRGTMEPVEKSL----RDAKMDKAQIHDIVLVGGSTRIPKVQKLLQDFFNGKELNKSINPDEAVAYGAAVQAAI 364 (1023)
Q Consensus 289 ~~~~~~~~~i~~~i~~~l----~~~~~~~~~i~~V~LvGG~sr~p~v~~~l~~~f~~~~i~~~~~pd~aVa~GAa~~a~~ 364 (1023)
.+++..++.+.-...+++ ++++. .+..+-+=||.++..++.+...+.+ +.++.++ .-.|..|.|||+.|..
T Consensus 375 hi~RA~LEsiayQ~~dv~~aM~~d~~~---~~~~LrvDGG~s~n~~lmQfqADil-g~~V~Rp-~~~EtTAlGaA~lAGl 449 (499)
T COG0554 375 HIARATLESIAYQTRDVLEAMEKDSGI---KLTRLRVDGGASRNNFLMQFQADIL-GVPVERP-VVLETTALGAAYLAGL 449 (499)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhcCC---CceeEEEcCccccchhHHHHHHHHh-CCeeecc-ccchhhHHHHHHHHhh
Confidence 344444444443333333 34443 5788899999999999999999999 7888776 4567899999999976
Q ss_pred HhC
Q psy6736 365 LHG 367 (1023)
Q Consensus 365 l~~ 367 (1023)
-.+
T Consensus 450 a~G 452 (499)
T COG0554 450 AVG 452 (499)
T ss_pred hhC
Confidence 554
No 194
>PF07318 DUF1464: Protein of unknown function (DUF1464); InterPro: IPR009927 This family consists of several hypothetical archaeal proteins of around 350 residues in length. The function of this family is unknown.
Probab=77.87 E-value=20 Score=39.78 Aligned_cols=54 Identities=30% Similarity=0.447 Sum_probs=38.3
Q ss_pred ccccceEEEecCccCcHHHHHHHHHhhcCc---ccCCCCCC----ccceecchHHHHHHHhC
Q psy6736 770 KAQIHDIVLVGGSTRIPKVQKLLQDFFNGK---ELNKSINP----DEAVAYGAAVQAAILHG 824 (1023)
Q Consensus 770 ~~~i~~V~LvGG~srip~v~~~l~~~f~~~---~~~~~~~p----~~aVa~GAa~~a~~l~~ 824 (1023)
..+++.|+|.|-.+++|-+++.+++.|.+. ++ ..+.+ -...|.|||+.|.-+.+
T Consensus 258 ~~~~~~IilSGr~~~~~~~~~~l~~~l~~~~~~~v-~~l~~~~~~aKeaA~GaAiIA~glaG 318 (343)
T PF07318_consen 258 VPDPDEIILSGRFSRIPEFRKKLEDRLEDYFPVKV-RKLEGLARKAKEAAQGAAIIANGLAG 318 (343)
T ss_pred cCCCCEEEEeccccccHHHHHHHHHHHHhhcccce-eecccccccchhhhhhHHHHhhhhhc
Confidence 346789999999999999988888877331 11 12222 13488999999977665
No 195
>PRK09585 anmK anhydro-N-acetylmuramic acid kinase; Reviewed
Probab=76.15 E-value=16 Score=41.33 Aligned_cols=67 Identities=21% Similarity=0.286 Sum_probs=42.6
Q ss_pred HHHHHHHHHHHHHHHcCCCccCcCeEEEEcCCCCcHHHHHHHHHHcCCcccc----ccCCCchhHHhHHHHHHHH
Q psy6736 294 LFRGTMEPVEKSLRDAKMDKAQIHDIVLVGGSTRIPKVQKLLQDFFNGKELN----KSINPDEAVAYGAAVQAAI 364 (1023)
Q Consensus 294 ~~~~i~~~i~~~l~~~~~~~~~i~~V~LvGG~sr~p~v~~~l~~~f~~~~i~----~~~~pd~aVa~GAa~~a~~ 364 (1023)
+.+-+...|.+.++... ...+.|+++||+++.|++.++|++.++ .++. ..++++.-=|..-|++|..
T Consensus 268 lt~~TA~sI~~~~~~~~---~~~~~vlv~GGGa~N~~Lm~~L~~~l~-~~v~~~~~~G~~~da~EA~aFA~La~~ 338 (365)
T PRK09585 268 LTELTAASIARAVRRLP---PGPDELLVCGGGARNPTLMERLAALLP-TEVATTDALGIDGDAKEALAFAWLAVR 338 (365)
T ss_pred HHHHHHHHHHHHHHhcc---CCCCEEEEECCCcchHHHHHHHHHhcC-CcccCHHHcCCChhHHHHHHHHHHHHH
Confidence 33334455555554432 224689999999999999999999995 3332 1245554445555666643
No 196
>PLN02666 5-oxoprolinase
Probab=75.92 E-value=14 Score=48.82 Aligned_cols=78 Identities=13% Similarity=0.117 Sum_probs=49.4
Q ss_pred EecHHHHHHHHHHHHHH-HHHHHHHHHHHcCCCccccceEEEecCccCcHHHHHHHHHhhcCcccCCCCCCccceecchH
Q psy6736 738 SITRARFEELNADLFRG-TMEPVEKSLRDAKMDKAQIHDIVLVGGSTRIPKVQKLLQDFFNGKELNKSINPDEAVAYGAA 816 (1023)
Q Consensus 738 ~itr~~~~~~~~~~~~~-~~~~i~~~l~~~~~~~~~i~~V~LvGG~srip~v~~~l~~~f~~~~~~~~~~p~~aVa~GAa 816 (1023)
-++-++..+-+..+.+. +...|+......+.++.+ -.++-.||+ =|..--.|.+.++-..+..+.+|.-.-|+|++
T Consensus 453 g~~~e~aA~~i~~ia~~~m~~air~i~~~~G~dpr~-~~l~afGGa--gp~ha~~lA~~lgi~~vivP~~~gv~sA~G~~ 529 (1275)
T PLN02666 453 DMSVEEVALGFVRVANEAMCRPIRQLTEMKGYETAN-HALACFGGA--GPQHACAIARALGMSEVFVHRYCGILSAYGMG 529 (1275)
T ss_pred CCCHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCCC-ceEEEecCc--HHHHHHHHHHHcCCCEEEeCCCccHHHHHHHH
Confidence 35556665555555544 345566666666666643 223444444 37777888888854557788889888899987
Q ss_pred HH
Q psy6736 817 VQ 818 (1023)
Q Consensus 817 ~~ 818 (1023)
+-
T Consensus 530 ~a 531 (1275)
T PLN02666 530 LA 531 (1275)
T ss_pred hh
Confidence 53
No 197
>PRK14878 UGMP family protein; Provisional
Probab=74.64 E-value=31 Score=38.60 Aligned_cols=24 Identities=21% Similarity=0.394 Sum_probs=22.2
Q ss_pred cceEEEecCccCcHHHHHHHHHhh
Q psy6736 773 IHDIVLVGGSTRIPKVQKLLQDFF 796 (1023)
Q Consensus 773 i~~V~LvGG~srip~v~~~l~~~f 796 (1023)
++.|+|+||.+...++++.+.+.+
T Consensus 242 ~~~vvlsGGVa~N~~L~~~l~~~~ 265 (323)
T PRK14878 242 KKEVLLVGGVAANRRLREKLEIMA 265 (323)
T ss_pred CCeEEEeccHHHHHHHHHHHHHHH
Confidence 578999999999999999999976
No 198
>PTZ00340 O-sialoglycoprotein endopeptidase-like protein; Provisional
Probab=71.60 E-value=68 Score=36.09 Aligned_cols=59 Identities=19% Similarity=0.345 Sum_probs=37.8
Q ss_pred HHHHHHHHHHHHHHcCCCccCcCeEEEEcCCCCcHHHHHHHHHHcCC--ccccccCCCchhHHhHHH
Q psy6736 295 FRGTMEPVEKSLRDAKMDKAQIHDIVLVGGSTRIPKVQKLLQDFFNG--KELNKSINPDEAVAYGAA 359 (1023)
Q Consensus 295 ~~~i~~~i~~~l~~~~~~~~~i~~V~LvGG~sr~p~v~~~l~~~f~~--~~i~~~~~pd~aVa~GAa 359 (1023)
++-+.+.+.++++.. .+..++++||-+...+||+.|++.... .++.. ..|..|.-.||-
T Consensus 248 ~~~L~~k~~~a~~~~-----~~~~lvv~GGVAaN~~LR~~l~~~~~~~~~~~~~-p~~~~ctDNaaM 308 (345)
T PTZ00340 248 FAMLVEVTERAMSHC-----GSNEVLIVGGVGCNLRLQEMMQQMAKERGGKLFA-MDERYCIDNGAM 308 (345)
T ss_pred HHHHHHHHHHHHHHh-----CCCeEEEcCCHHHHHHHHHHHHHHHHHcCCEEEe-CChHhhhhhHHH
Confidence 344445555555543 367899999999999999999998632 23332 245555544443
No 199
>PRK14878 UGMP family protein; Provisional
Probab=70.71 E-value=54 Score=36.74 Aligned_cols=24 Identities=21% Similarity=0.394 Sum_probs=22.1
Q ss_pred cCeEEEEcCCCCcHHHHHHHHHHc
Q psy6736 316 IHDIVLVGGSTRIPKVQKLLQDFF 339 (1023)
Q Consensus 316 i~~V~LvGG~sr~p~v~~~l~~~f 339 (1023)
+..|+|+||.+...++++.|.+.+
T Consensus 242 ~~~vvlsGGVa~N~~L~~~l~~~~ 265 (323)
T PRK14878 242 KKEVLLVGGVAANRRLREKLEIMA 265 (323)
T ss_pred CCeEEEeccHHHHHHHHHHHHHHH
Confidence 678999999999999999999876
No 200
>PLN02920 pantothenate kinase 1
Probab=69.50 E-value=89 Score=35.55 Aligned_cols=50 Identities=12% Similarity=-0.063 Sum_probs=37.0
Q ss_pred ccCcCeEEEEcCCCCcH-HHHHHHHHH---c--CCccccccCCCchhHHhHHHHHH
Q psy6736 313 KAQIHDIVLVGGSTRIP-KVQKLLQDF---F--NGKELNKSINPDEAVAYGAAVQA 362 (1023)
Q Consensus 313 ~~~i~~V~LvGG~sr~p-~v~~~l~~~---f--~~~~i~~~~~pd~aVa~GAa~~a 362 (1023)
..+++.|+++|.+.|.+ ..++.|.-. + ++.+....-+....-|.||.+..
T Consensus 295 ~~~ik~Ivf~G~fir~~~~tm~~ls~a~~fwS~g~~ka~FLrHeGYlGAlGAfl~~ 350 (398)
T PLN02920 295 RFGLKRIFFGGFFIRGHSYTMDTISVAVHFWSKGEAKAMFLRHEGFLGALGAFMSY 350 (398)
T ss_pred HcCCCEEEEEeecccCcHHHHHHHHHHHHHhccCceeEEEecCcchhHHHHHHHhc
Confidence 45689999999999998 666644432 2 34556666788899999998754
No 201
>PF03702 UPF0075: Uncharacterised protein family (UPF0075); InterPro: IPR005338 Anhydro-N-acetylmuramic acid kinase catalyzes the specific phosphorylation of 1,6-anhydro-N-acetylmuramic acid (anhMurNAc) with the simultaneous cleavage of the 1,6-anhydro ring, generating MurNAc-6-P. It is also required for the utilisation of anhMurNAc, either imported from the medium, or derived from its own cell wall murein, and in so doing plays a role in cell wall recycling [, ]. ; GO: 0005524 ATP binding, 0016773 phosphotransferase activity, alcohol group as acceptor, 0006040 amino sugar metabolic process, 0009254 peptidoglycan turnover; PDB: 3QBX_B 3QBW_A 3CQY_B.
Probab=68.27 E-value=12 Score=42.41 Aligned_cols=65 Identities=25% Similarity=0.320 Sum_probs=38.8
Q ss_pred HHHHHHHHHHHcCCCccccceEEEecCccCcHHHHHHHHHhhcCcccCC----CCCCccceecchHHHHHHH
Q psy6736 755 TMEPVEKSLRDAKMDKAQIHDIVLVGGSTRIPKVQKLLQDFFNGKELNK----SINPDEAVAYGAAVQAAIL 822 (1023)
Q Consensus 755 ~~~~i~~~l~~~~~~~~~i~~V~LvGG~srip~v~~~l~~~f~~~~~~~----~~~p~~aVa~GAa~~a~~l 822 (1023)
+...|.+.++... .+++.|+++||+.+.|.+.+.|++.+++.++.. .++|+.-=|.+-|++|...
T Consensus 270 TA~sI~~~i~~~~---~~~~~v~v~GGGa~N~~L~~~L~~~l~~~~v~~~~~~gi~~~~~EA~aFA~La~~~ 338 (364)
T PF03702_consen 270 TAQSIADAIRRFP---PQPDEVYVCGGGARNPFLMERLQERLPGIPVKTTDELGIPPDAKEAMAFAWLAYRR 338 (364)
T ss_dssp HHHHHHHHHHHH----TT-EEEEEESGGGG-HHHHHHHHHH-TTCEEEEGGGGTS-CCCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhcC---CCCceEEEECCCcCCHHHHHHHHhhCCCCEEecHHHcCCCHHHHHHHHHHHHHHHH
Confidence 3344444454433 227899999999999999999999997644432 2445543344556666543
No 202
>COG4819 EutA Ethanolamine utilization protein, possible chaperonin protecting lyase from inhibition [Amino acid transport and metabolism]
Probab=67.45 E-value=4.2 Score=43.88 Aligned_cols=51 Identities=33% Similarity=0.537 Sum_probs=31.4
Q ss_pred CCCCCCCCccCCCCcceEEEEEeCCceEEEEEEEEeCCEEEEEEecCCCCCcHHHH
Q psy6736 620 PGAGPGPTIEEGSGERNVLIFDLGGGTFDVSILTIEDGIFEVKSTAGDTHLGGEDF 675 (1023)
Q Consensus 620 ~~~~~~~~~~~~~~~~~vlV~D~GggT~dvsi~~~~~~~~~v~~~~gd~~lGG~~~ 675 (1023)
+|..+++-.-..++...++=+|+||||+..|++. .| ++..++. ..+||+-+
T Consensus 130 AGkGaGA~t~Seqr~t~v~NlDIGGGTtN~slFD--~G--kv~dTaC-LdiGGRLi 180 (473)
T COG4819 130 AGKGAGAQTLSEQRLTRVLNLDIGGGTTNYSLFD--AG--KVSDTAC-LDIGGRLI 180 (473)
T ss_pred ccCCccccchhhhhceEEEEEeccCCccceeeec--cc--cccccee-eecCcEEE
Confidence 4444444222224556788899999999999876 33 3444433 45677654
No 203
>COG0533 QRI7 Metal-dependent proteases with possible chaperone activity [Posttranslational modification, protein turnover, chaperones]
Probab=66.13 E-value=79 Score=35.19 Aligned_cols=61 Identities=18% Similarity=0.378 Sum_probs=41.2
Q ss_pred HHHHHHHHHHHHHHHcCCCccCcCeEEEEcCCCCcHHHHHHHHHHcC--CccccccCCCchhHHhHHHH
Q psy6736 294 LFRGTMEPVEKSLRDAKMDKAQIHDIVLVGGSTRIPKVQKLLQDFFN--GKELNKSINPDEAVAYGAAV 360 (1023)
Q Consensus 294 ~~~~i~~~i~~~l~~~~~~~~~i~~V~LvGG~sr~p~v~~~l~~~f~--~~~i~~~~~pd~aVa~GAa~ 360 (1023)
.++-+++..+++++..+ .+.++++||-+....+|+++++... +..+. ...++.|.-.||-+
T Consensus 245 v~~~L~~kt~rAl~~~~-----~~~lvi~GGVaaN~~LR~~l~~~~~~~g~~~~-~p~~~lCtDNaaMI 307 (342)
T COG0533 245 VFDMLVEKTERALKHTG-----KKELVIAGGVAANSRLREMLEEMCKERGAEVY-IPPLELCTDNAAMI 307 (342)
T ss_pred HHHHHHHHHHHHHHHhC-----CCEEEEeccHHHhHHHHHHHHHHHHhcCCEEE-cCChHhccchHHHH
Confidence 45566667777777665 4679999999999999999998762 22232 22455555555543
No 204
>PF02541 Ppx-GppA: Ppx/GppA phosphatase family; InterPro: IPR003695 Exopolyphosphate phosphatase (Ppx) 3.6.1.11 from EC and guanosine pentaphosphate phosphatase (GppA) 3.6.1.40 from EC belong to the sugar kinase/actin/hsp70 superfamily [].; PDB: 3MDQ_A 1U6Z_A 1T6D_B 2J4R_B 1T6C_A 2FLO_B 3CER_B 3HI0_A.
Probab=65.89 E-value=14 Score=40.70 Aligned_cols=40 Identities=25% Similarity=0.566 Sum_probs=26.8
Q ss_pred ceEEEEEeCCceEEEEEEEEeCCEEEEEEecCCCCCcHHHHHHHH
Q psy6736 635 RNVLIFDLGGGTFDVSILTIEDGIFEVKSTAGDTHLGGEDFDNRM 679 (1023)
Q Consensus 635 ~~vlV~D~GggT~dvsi~~~~~~~~~v~~~~gd~~lGG~~~D~~l 679 (1023)
.+.+|+|+|||++.+++++ ++.+.-..+ -.+|.-.+.+.+
T Consensus 112 ~~~lviDIGGGStEl~~~~--~~~~~~~~S---l~lG~vrl~e~~ 151 (285)
T PF02541_consen 112 KNGLVIDIGGGSTELILFE--NGKVVFSQS---LPLGAVRLTERF 151 (285)
T ss_dssp SSEEEEEEESSEEEEEEEE--TTEEEEEEE---ES--HHHHHHHH
T ss_pred CCEEEEEECCCceEEEEEE--CCeeeEeee---eehHHHHHHHHH
Confidence 4589999999999999876 554433322 468887776554
No 205
>TIGR03281 methan_mark_12 putative methanogenesis marker protein 12. Members of this protein family, to date, are found in a completed prokaryotic genome if and only if the species is one of the archaeal methanogens. The exact function is unknown, but likely is linked to methanogenesis or a process closely connected to it.
Probab=65.75 E-value=34 Score=37.18 Aligned_cols=49 Identities=20% Similarity=0.314 Sum_probs=39.2
Q ss_pred cCeEEEEcC--CCCcH-HHHHHHHHHcCCccccccCCCchhHHhHHHHHHHHHhC
Q psy6736 316 IHDIVLVGG--STRIP-KVQKLLQDFFNGKELNKSINPDEAVAYGAAVQAAILHG 367 (1023)
Q Consensus 316 i~~V~LvGG--~sr~p-~v~~~l~~~f~~~~i~~~~~pd~aVa~GAa~~a~~l~~ 367 (1023)
.+.|+|.|- +.+.| .+++.|++.| +.++. .+.. .+.|.|+|+.|.-+.+
T Consensus 263 ~~~IvLSGs~g~~r~~~~v~~~I~~~L-~~~V~-~L~~-ksAA~G~AiIA~dI~g 314 (326)
T TIGR03281 263 EAGVVLAGSGGTLREPINFSGKIKRVL-SCKVL-VLDS-ESAAIGLALIAEDIFS 314 (326)
T ss_pred CCcEEEeCcchhccCchHHHHHHHHHh-CCCeE-Eecc-hhhhhhHHHHHHHHhC
Confidence 357999988 99999 9999999999 44443 2333 8899999999977765
No 206
>TIGR03281 methan_mark_12 putative methanogenesis marker protein 12. Members of this protein family, to date, are found in a completed prokaryotic genome if and only if the species is one of the archaeal methanogens. The exact function is unknown, but likely is linked to methanogenesis or a process closely connected to it.
Probab=64.71 E-value=19 Score=39.01 Aligned_cols=49 Identities=20% Similarity=0.317 Sum_probs=38.8
Q ss_pred cceEEEecC--ccCcH-HHHHHHHHhhcCcccCCCCCCccceecchHHHHHHHhC
Q psy6736 773 IHDIVLVGG--STRIP-KVQKLLQDFFNGKELNKSINPDEAVAYGAAVQAAILHG 824 (1023)
Q Consensus 773 i~~V~LvGG--~srip-~v~~~l~~~f~~~~~~~~~~p~~aVa~GAa~~a~~l~~ 824 (1023)
.+.|+|.|- +.+.| .+++.|++.|. .++. .+.. ++.|+|+|+.|.-+.+
T Consensus 263 ~~~IvLSGs~g~~r~~~~v~~~I~~~L~-~~V~-~L~~-ksAA~G~AiIA~dI~g 314 (326)
T TIGR03281 263 EAGVVLAGSGGTLREPINFSGKIKRVLS-CKVL-VLDS-ESAAIGLALIAEDIFS 314 (326)
T ss_pred CCcEEEeCcchhccCchHHHHHHHHHhC-CCeE-Eecc-hhhhhhHHHHHHHHhC
Confidence 347999987 99999 99999999994 4432 3333 8899999999987765
No 207
>COG0554 GlpK Glycerol kinase [Energy production and conversion]
Probab=63.36 E-value=18 Score=41.77 Aligned_cols=83 Identities=19% Similarity=0.301 Sum_probs=58.0
Q ss_pred EEecHH-HHHHHHHHHHHHHHHHHHHHHH----HcCCCccccceEEEecCccCcHHHHHHHHHhhcCcccCCCCCCccce
Q psy6736 737 TSITRA-RFEELNADLFRGTMEPVEKSLR----DAKMDKAQIHDIVLVGGSTRIPKVQKLLQDFFNGKELNKSINPDEAV 811 (1023)
Q Consensus 737 ~~itr~-~~~~~~~~~~~~~~~~i~~~l~----~~~~~~~~i~~V~LvGG~srip~v~~~l~~~f~~~~~~~~~~p~~aV 811 (1023)
+-|||. .-+.+++..++.+.-...++++ +++. .++.+-+=||.|+..++.+...+.+ +.++.++.+ .|.-
T Consensus 365 ~Gltrgt~~~hi~RA~LEsiayQ~~dv~~aM~~d~~~---~~~~LrvDGG~s~n~~lmQfqADil-g~~V~Rp~~-~EtT 439 (499)
T COG0554 365 FGLTRGTTKAHIARATLESIAYQTRDVLEAMEKDSGI---KLTRLRVDGGASRNNFLMQFQADIL-GVPVERPVV-LETT 439 (499)
T ss_pred EeeCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCC---CceeEEEcCccccchhHHHHHHHHh-CCeeecccc-chhh
Confidence 444443 2334455555555554444444 3333 5788889999999999999999999 677766654 5789
Q ss_pred ecchHHHHHHHhC
Q psy6736 812 AYGAAVQAAILHG 824 (1023)
Q Consensus 812 a~GAa~~a~~l~~ 824 (1023)
|.|||+.|..-.+
T Consensus 440 AlGaA~lAGla~G 452 (499)
T COG0554 440 ALGAAYLAGLAVG 452 (499)
T ss_pred HHHHHHHHhhhhC
Confidence 9999999987654
No 208
>PTZ00340 O-sialoglycoprotein endopeptidase-like protein; Provisional
Probab=62.87 E-value=96 Score=34.94 Aligned_cols=39 Identities=18% Similarity=0.359 Sum_probs=29.6
Q ss_pred HHHHHHHHHHHHHcCCCccccceEEEecCccCcHHHHHHHHHhh
Q psy6736 753 RGTMEPVEKSLRDAKMDKAQIHDIVLVGGSTRIPKVQKLLQDFF 796 (1023)
Q Consensus 753 ~~~~~~i~~~l~~~~~~~~~i~~V~LvGG~srip~v~~~l~~~f 796 (1023)
+-+.+.+.++++.. .++.|+++||-+...++|++|++..
T Consensus 249 ~~L~~k~~~a~~~~-----~~~~lvv~GGVAaN~~LR~~l~~~~ 287 (345)
T PTZ00340 249 AMLVEVTERAMSHC-----GSNEVLIVGGVGCNLRLQEMMQQMA 287 (345)
T ss_pred HHHHHHHHHHHHHh-----CCCeEEEcCCHHHHHHHHHHHHHHH
Confidence 33444555555543 3678999999999999999999986
No 209
>PRK03011 butyrate kinase; Provisional
Probab=62.37 E-value=15 Score=41.60 Aligned_cols=47 Identities=21% Similarity=0.232 Sum_probs=36.3
Q ss_pred CcCeEEEEcCCCCcHHHHHHHHHHcC---CccccccCCCchhHHhHHHHH
Q psy6736 315 QIHDIVLVGGSTRIPKVQKLLQDFFN---GKELNKSINPDEAVAYGAAVQ 361 (1023)
Q Consensus 315 ~i~~V~LvGG~sr~p~v~~~l~~~f~---~~~i~~~~~pd~aVa~GAa~~ 361 (1023)
++|.|+|.||.+..+.+++.|++.+. ...+....+-.+|.+.||+..
T Consensus 295 dpD~IVlgGGI~~~~~l~~~I~~~l~~~~pv~i~p~~~e~~A~a~GA~rv 344 (358)
T PRK03011 295 KVDAIVLTGGLAYSKRLVERIKERVSFIAPVIVYPGEDEMEALAEGALRV 344 (358)
T ss_pred CCCEEEEeCccccCHHHHHHHHHHHHhhCCeEEEeCCCHHHHHHHHHHHH
Confidence 68999999999999999998887762 234455555668999998743
No 210
>PF02543 CmcH_NodU: Carbamoyltransferase; InterPro: IPR003696 The putative O-carbamoyltransferases (O-Cases) encoded by the nodU genes of Rhizobium fredii and Bradyrhizobium japonicum are involved in the synthesis of nodulation factors []. The cmcH genes of Nocardia lactamdurans and Streptomyces clavuligerus encode a functional 3'-hydroxymethylcephem O-carbamoyltransferase 2.1.3.7 from EC for cephamycin biosynthesis that shows significant similarity to the O-carbamoyltransferases [].; GO: 0003824 catalytic activity, 0009058 biosynthetic process; PDB: 3VES_A 3VER_A 3VEN_A 3VF2_A 3VEX_A 3VEW_A 3VET_A 3VEO_A 3VEZ_A 3VF4_A.
Probab=61.61 E-value=1.2e+02 Score=34.56 Aligned_cols=83 Identities=19% Similarity=0.153 Sum_probs=56.8
Q ss_pred EEecHHHHHHHHHHHHHHH-HHHHHHHHHHcCCCccccce-EEEecCccCcHHHHHHHHHhhcCcccC-CCCCCccceec
Q psy6736 737 TSITRARFEELNADLFRGT-MEPVEKSLRDAKMDKAQIHD-IVLVGGSTRIPKVQKLLQDFFNGKELN-KSINPDEAVAY 813 (1023)
Q Consensus 737 ~~itr~~~~~~~~~~~~~~-~~~i~~~l~~~~~~~~~i~~-V~LvGG~srip~v~~~l~~~f~~~~~~-~~~~p~~aVa~ 813 (1023)
..-.+.++...++..++++ +..++.++++.+ ++. +.|.||....-..-..|.+..+-..+. .+.--|.-+|+
T Consensus 131 ~~~~~~dlAa~~Q~~~E~~v~~~~~~~~~~~g-----~~~~L~laGGvaLN~~~N~~l~~~~~~~~v~V~Pa~gD~G~ai 205 (360)
T PF02543_consen 131 LTQRHADLAASAQKVLEEIVLHLVRHLLERTG-----IDNNLCLAGGVALNCKANGRLLEEPGFDNVFVPPAAGDAGLAI 205 (360)
T ss_dssp EESS-HHHHHHHHHHHHHHHHHHHHHHHHHHT-------SEEEEESGGGG-HHHHHHHHTSTT-SEEE--TTTSGGGHHH
T ss_pred ccchHHHHHHHHHHHHHHHHHHHHHHHHHHhC-----CCCeEEEechHHHHHHHHHHHHhcCCCCeEEECCCCCCcchHH
Confidence 3456778887788888775 456667777666 345 999999999888888888774333333 34455899999
Q ss_pred chHHHHHHHhC
Q psy6736 814 GAAVQAAILHG 824 (1023)
Q Consensus 814 GAa~~a~~l~~ 824 (1023)
|||+++....+
T Consensus 206 GaA~~~~~~~~ 216 (360)
T PF02543_consen 206 GAALYAWHELG 216 (360)
T ss_dssp HHHHHHHHHTT
T ss_pred HHHHHHHHHhc
Confidence 99999976543
No 211
>COG0145 HyuA N-methylhydantoinase A/acetone carboxylase, beta subunit [Amino acid transport and metabolism / Secondary metabolites biosynthesis, transport, and catabolism]
Probab=60.68 E-value=10 Score=46.62 Aligned_cols=42 Identities=24% Similarity=0.465 Sum_probs=27.3
Q ss_pred eeeecchHHHHHHhccccccCccccccCCCCCcEEEEEEeCCceEEEEEEEE
Q psy6736 146 LRIINEPTAAAIAYGLDKKVGSTAVEYNGSGERNVLIFDLGGGTFDVSILTI 197 (1023)
Q Consensus 146 ~~li~Ep~AAal~y~~~~~~~~~~~~~~~~~~~~vlV~D~GggT~dvsv~~~ 197 (1023)
..+.+=|.|..+....-.... .+ +++++||||.|||++++.-
T Consensus 256 ~tI~SGPAagvvGAa~ltg~~---------~g-~~i~~DmGGTStDva~i~~ 297 (674)
T COG0145 256 ETILSGPAAGVVGAAYLTGLK---------AG-NAIVFDMGGTSTDVALIID 297 (674)
T ss_pred eeEeeccHHHHHHHHHhcccc---------cC-CEEEEEcCCcceeeeeeec
Confidence 346666666555443321100 22 5999999999999999873
No 212
>PF06277 EutA: Ethanolamine utilisation protein EutA; InterPro: IPR009377 Proteins in this entry are EutA ethanolamine utilization proteins, reactivating factors for ethanolamine ammonia lyase, encoded by the ethanolamine utilization eut operon. The holoenzyme of adenosylcobalamin-dependent ethanolamine ammonia-lyase (EutBC, IPR0092462 from INTERPRO, IPR010628 from INTERPRO), which is part of the ethanolamine utilization pathway [, , ], undergoes suicidal inactivation during catalysis as well as inactivation in the absence of substrate. The inactivation involves the irreversible cleavage of the Co-C bond of the coenzyme. The inactivated holoenzyme undergoes rapid and continuous reactivation in the presence of ATP, Mg2+, and free adenosylcobalamin in permeabilised cells (in situ), homogenate, and cell extracts of Escherichia coli. The EutA protein is essential for reactivation. It was demonstrated with purified recombinant EutA that both the suicidally inactivated and O2-inactivated holoethanolamine ammonia lyase underwent rapid reactivation in vitro by EutA in the presence of adenosylcobalamin, ATP, and Mg2+ []. The inactive enzyme-cyanocobalamin complex was also activated in situ and in vitro by EutA under the same conditions. Thus EutA is believed to be the only component of the reactivating factor for ethanolamine ammonia lyase. Reactivation and activation occur through the exchange of modified coenzyme for free intact adenosylcobalamin []. Bacteria that harbor the ethanolamine utilization pathway can use ethanolamine as a source of carbon and nitrogen. For more information on the ethanolamine utilization pathway, please see IPR009194 from INTERPRO, IPR012408 from INTERPRO.
Probab=59.63 E-value=20 Score=41.48 Aligned_cols=88 Identities=19% Similarity=0.123 Sum_probs=54.8
Q ss_pred ceEecCCCCCHHHHHHHHHHHHHcCCceeeee---cchHHHHHHhccccccCccccccCCCCCcEEEEEEeCCceEEEEE
Q psy6736 118 NEGLIPAYFNISSVKSTKDSGTIAGLNVLRII---NEPTAAAIAYGLDKKVGSTAVEYNGSGERNVLIFDLGGGTFDVSI 194 (1023)
Q Consensus 118 ~vitVPa~~~~~qr~~l~~Aa~~AGl~~~~li---~Ep~AAal~y~~~~~~~~~~~~~~~~~~~~vlV~D~GggT~dvsv 194 (1023)
++||==+--.+.+|..+..-+..||==|+.-- -|..=|+-..|.... .......++=+|+||||+.+++
T Consensus 88 VIITGETArKeNA~~v~~~Ls~~aGDFVVATAGPdLEsiiAgkGsGA~~~--------S~~~~~~V~NiDIGGGTtN~av 159 (473)
T PF06277_consen 88 VIITGETARKENAREVLHALSGFAGDFVVATAGPDLESIIAGKGSGAAAL--------SKEHHTVVANIDIGGGTTNIAV 159 (473)
T ss_pred EEEecchhhhhhHHHHHHHHHHhcCCEEEEccCCCHHHHHhccCccHHHH--------hhhhCCeEEEEEeCCCceeEEE
Confidence 56776677788888888888888983332221 233333322221111 1115678999999999999999
Q ss_pred EEEeCCEEEEEEecCCCCccHHHH
Q psy6736 195 LTIEDGIFEVKSTAGDTHLGGEDF 218 (1023)
Q Consensus 195 ~~~~~~~~~v~~~~~~~~lGG~~~ 218 (1023)
++.+ ++.++ ++.++||+-|
T Consensus 160 f~~G----~v~~T-~cl~IGGRLi 178 (473)
T PF06277_consen 160 FDNG----EVIDT-ACLDIGGRLI 178 (473)
T ss_pred EECC----EEEEE-EEEeeccEEE
Confidence 8863 23332 3367888753
No 213
>PF00349 Hexokinase_1: Hexokinase; InterPro: IPR022672 Hexokinase is an important enzyme that catalyses the ATP-dependent conversion of aldo- and keto-hexose sugars to the hexose-6-phosphate (H6P). The enzyme can catalyse this reaction on glucose, fructose, sorbitol and glucosamine, and as such is the first step in a number of metabolic pathways []. The addition of a phosphate group to the sugar acts to trap it in a cell, since the negatively charged phosphate cannot easily traverse the plasma membrane. The enzyme is widely distributed in eukaryotes. There are three isozymes of hexokinase in yeast (PI, PII and glucokinase): isozymes PI and PII phosphorylate both aldo- and keto-sugars; glucokinase is specific for aldo-hexoses. All three isozymes contain two domains []. Structural studies of yeast hexokinase reveal a well-defined catalytic pocket that binds ATP and hexose, allowing easy transfer of the phosphate from ATP to the sugar []. Vertebrates contain four hexokinase isozymes, designated I to IV, where types I to III contain a duplication of the two-domain yeast-type hexokinases. Both the N- and C-terminal halves bind hexose and H6P, though in types I an III only the C-terminal half supports catalysis, while both halves support catalysis in type II. The N-terminal half is the regulatory region. Type IV hexokinase is similar to the yeast enzyme in containing only the two domains, and is sometimes incorrectly referred to as glucokinase. The different vertebrate isozymes differ in their catalysis, localisation and regulation, thereby contributing to the different patterns of glucose metabolism in different tissues []. Whereas types I to III can phosphorylate a variety of hexose sugars and are inhibited by glucose-6-phosphate (G6P), type IV is specific for glucose and shows no G6P inhibition. Type I enzyme may have a catabolic function, producing H6P for energy production in glycolysis; it is bound to the mitochondrial membrane, which enables the coordination of glycolysis with the TCA cycle. Types II and III enzyme may have anabolic functions, providing H6P for glycogen or lipid synthesis. Type IV enzyme is found in the liver and pancreatic beta-cells, where it is controlled by insulin (activation) and glucagon (inhibition). In pancreatic beta-cells, type IV enzyme acts as a glucose sensor to modify insulin secretion. Mutations in type IV hexokinase have been associated with diabetes mellitus. Hexokinase (2.7.1.1 from EC), a fructose and glucose phosphorylating enzyme, contains two structurally similar domains represented by this family and PF03727 from PFAM. Some hexokinases have two copies of each of these domains. This entry represents the N-terminal domain.; GO: 0005524 ATP binding, 0016773 phosphotransferase activity, alcohol group as acceptor, 0005975 carbohydrate metabolic process; PDB: 3O1W_A 3O6W_A 3O4W_B 3O08_B 3O80_A 3O5B_A 3O8M_A 3O1B_A 1BG3_A 4DHY_A ....
Probab=58.69 E-value=31 Score=35.85 Aligned_cols=55 Identities=15% Similarity=0.363 Sum_probs=34.9
Q ss_pred CCcceEEEEEeCCceEEEEEEEEeCC-EEEEEEecCCCC---CcHHHHHHHHHHHHHHHHH
Q psy6736 632 SGERNVLIFDLGGGTFDVSILTIEDG-IFEVKSTAGDTH---LGGEDFDNRMVNHFVQEFK 688 (1023)
Q Consensus 632 ~~~~~vlV~D~GggT~dvsi~~~~~~-~~~v~~~~gd~~---lGG~~~D~~l~~~~~~~~~ 688 (1023)
.+.+.+|++|+||.+|-|.++++.++ .+++........ .-|.. +.|.+|+++.+.
T Consensus 60 ~E~G~~LalDlGGTnlRv~~V~L~g~~~~~~~~~~~~ip~~~~~~~~--~~lFd~ia~~i~ 118 (206)
T PF00349_consen 60 NEKGDFLALDLGGTNLRVALVELSGNGKVEIEQEKYKIPEELMNGSG--EELFDFIADCIA 118 (206)
T ss_dssp TTEEEEEEEEESSSSEEEEEEEEESSSEEEEEEEEEE--HHHHTSBH--HHHHHHHHHHHH
T ss_pred CCCceEEEEeecCcEEEEEEEEEcCCCCceeeeccccCChHHhcCCc--ccHHHHHHHHHH
Confidence 55678999999999999999999876 444433222111 01111 556677766654
No 214
>COG2377 Predicted molecular chaperone distantly related to HSP70-fold metalloproteases [Posttranslational modification, protein turnover, chaperones]
Probab=57.98 E-value=63 Score=36.17 Aligned_cols=54 Identities=22% Similarity=0.246 Sum_probs=41.6
Q ss_pred CccCcCeEEEEcCCCCcHHHHHHHHHHcCCcccc----ccCCCchhHHhHHHHHHHHH
Q psy6736 312 DKAQIHDIVLVGGSTRIPKVQKLLQDFFNGKELN----KSINPDEAVAYGAAVQAAIL 365 (1023)
Q Consensus 312 ~~~~i~~V~LvGG~sr~p~v~~~l~~~f~~~~i~----~~~~pd~aVa~GAa~~a~~l 365 (1023)
...+.+..+++||+.+.|++.+.|...+++..|. ..+++|..=|.+-|+.|...
T Consensus 287 ~~~~p~~l~vcGGG~~N~llm~rLa~l~~g~~V~~t~~~g~~gd~~EA~afA~LA~r~ 344 (371)
T COG2377 287 LQGDPRRLVVCGGGRRNPLLMARLAALLEGVEVATTDEAGLDGDAVEAEAFAWLAWRT 344 (371)
T ss_pred ccCCCceeEeecCCccCHHHHHHHHHhcCCCeeeechhcCCCcchhhHHHHHHHHHHH
Confidence 4566789999999999999999999999764443 25577776677777776543
No 215
>PRK09604 UGMP family protein; Validated
Probab=57.19 E-value=3.2e+02 Score=30.66 Aligned_cols=48 Identities=19% Similarity=0.203 Sum_probs=35.3
Q ss_pred CcCeEEEEcCCCCcHHHHHHHHHHcCC--ccccccC---CCchhHHhHHHHHH
Q psy6736 315 QIHDIVLVGGSTRIPKVQKLLQDFFNG--KELNKSI---NPDEAVAYGAAVQA 362 (1023)
Q Consensus 315 ~i~~V~LvGG~sr~p~v~~~l~~~f~~--~~i~~~~---~pd~aVa~GAa~~a 362 (1023)
+++.|+|.||.+...++++.|.+.+.. ..+..+. --|.+++.|++=+-
T Consensus 254 ~~~~lvlsGGVa~N~~L~~~l~~~~~~~g~~v~~~~~~p~~D~gisIg~ag~~ 306 (332)
T PRK09604 254 GVKTLVVAGGVAANSGLRERLAELAKKRGIEVFIPPLKLCTDNAAMIAAAGYE 306 (332)
T ss_pred CCCeEEEcChHHHHHHHHHHHHHHHHHCCCEEECCCCCCCcHHHHHHHHHHHH
Confidence 467899999999999999999988732 2333332 34788888887443
No 216
>PF08735 DUF1786: Putative pyruvate format-lyase activating enzyme (DUF1786); InterPro: IPR014846 This family is annotated as pyruvate formate-lyase activating enzyme (1.97.1.4 from EC) in UniProt. It is not clear where this annotation comes from.
Probab=56.51 E-value=90 Score=33.30 Aligned_cols=72 Identities=18% Similarity=0.247 Sum_probs=46.0
Q ss_pred CCcCCcceE--ecCCCCCHHHHHHHHHHHHHcCCceeeeecchHHHHHHhccccccCccccccCCCCCcEEEEEEeCCce
Q psy6736 112 RKVDGQNEG--LIPAYFNISSVKSTKDSGTIAGLNVLRIINEPTAAAIAYGLDKKVGSTAVEYNGSGERNVLIFDLGGGT 189 (1023)
Q Consensus 112 ~~~~~~~vi--tVPa~~~~~qr~~l~~Aa~~AGl~~~~li~Ep~AAal~y~~~~~~~~~~~~~~~~~~~~vlV~D~GggT 189 (1023)
+..+...+. .+|.+|+-- +++++++..+|.+. -+.+-..||.+....+... +....++++|+|-|+
T Consensus 111 g~~~~~~~y~~~~P~~~TRm--~av~~~~~~~~~~~-~vmDTg~AAvlGal~d~~v---------~~~~~~~~vniGN~H 178 (254)
T PF08735_consen 111 GGRPESFVYADDPPPYFTRM--RAVRESLGGAGYDE-VVMDTGPAAVLGALCDPEV---------SSREGIIVVNIGNGH 178 (254)
T ss_pred CCCHHHeeecCCCcHHHHHH--HHHHHHhccCCCCc-eEecCHHHHHhhhhcChhh---------hccCCeEEEEeCCcc
Confidence 445667777 899997643 56667766666666 3444444444433332221 145679999999998
Q ss_pred EEEEEE
Q psy6736 190 FDVSIL 195 (1023)
Q Consensus 190 ~dvsv~ 195 (1023)
|=..++
T Consensus 179 Tlaa~v 184 (254)
T PF08735_consen 179 TLAALV 184 (254)
T ss_pred EEEEEE
Confidence 888777
No 217
>TIGR00143 hypF [NiFe] hydrogenase maturation protein HypF. A previously described regulatory effect of HypF mutatation is attributable to loss of activity of a regulatory hydrogenase. A zinc finger-like region CXXCX(18)CXXCX(24)CXXCX(18)CXXC region further supported the regulatory hypothesis. However, more recent work (PUBMED:11375153) shows the direct effect is on the activity of expressed hydrogenases with nickel/iron centers, rather than on expression.
Probab=54.96 E-value=27 Score=43.43 Aligned_cols=49 Identities=29% Similarity=0.364 Sum_probs=37.4
Q ss_pred CcCeEEEEcCCCCcHHHHHHHHHHcC--Ccccccc---CCCchhHHhHHHHHHH
Q psy6736 315 QIHDIVLVGGSTRIPKVQKLLQDFFN--GKELNKS---INPDEAVAYGAAVQAA 363 (1023)
Q Consensus 315 ~i~~V~LvGG~sr~p~v~~~l~~~f~--~~~i~~~---~~pd~aVa~GAa~~a~ 363 (1023)
.++.|+|+||..+..++++.|.+.+. +.++..+ .--|.+++.|.|++|+
T Consensus 658 g~~~VvLSGGVfqN~~L~~~L~~~L~~~g~~v~~p~~~p~nDgGislGQa~~a~ 711 (711)
T TIGR00143 658 GIHKIVISGGVFYNRLLLERLAKYLKGLGFQFLFHRHLPPGDGGISLGQAVAAA 711 (711)
T ss_pred CCCeEEEeccHHHHHHHHHHHHHHHHhCCCEEEccCCCCCCHHHHHHHHHHHhC
Confidence 46789999999999999999988773 2333322 2348899999988774
No 218
>COG2377 Predicted molecular chaperone distantly related to HSP70-fold metalloproteases [Posttranslational modification, protein turnover, chaperones]
Probab=53.06 E-value=1.9e+02 Score=32.48 Aligned_cols=55 Identities=22% Similarity=0.238 Sum_probs=41.7
Q ss_pred CCccccceEEEecCccCcHHHHHHHHHhhcCcccC----CCCCCccceecchHHHHHHH
Q psy6736 768 MDKAQIHDIVLVGGSTRIPKVQKLLQDFFNGKELN----KSINPDEAVAYGAAVQAAIL 822 (1023)
Q Consensus 768 ~~~~~i~~V~LvGG~srip~v~~~l~~~f~~~~~~----~~~~p~~aVa~GAa~~a~~l 822 (1023)
......+..+++||+.+.|++.+.|...+++..+. ..+++|..=|.+-|+.|...
T Consensus 286 ~~~~~p~~l~vcGGG~~N~llm~rLa~l~~g~~V~~t~~~g~~gd~~EA~afA~LA~r~ 344 (371)
T COG2377 286 TLQGDPRRLVVCGGGRRNPLLMARLAALLEGVEVATTDEAGLDGDAVEAEAFAWLAWRT 344 (371)
T ss_pred hccCCCceeEeecCCccCHHHHHHHHHhcCCCeeeechhcCCCcchhhHHHHHHHHHHH
Confidence 34566789999999999999999999999764543 24567766667777777543
No 219
>TIGR03123 one_C_unchar_1 probable H4MPT-linked C1 transfer pathway protein. This protein family was identified, by the method of partial phylogenetic profiling, as related to the use of tetrahydromethanopterin (H4MPT) as a C-1 carrier. Characteristic markers of the H4MPT-linked C1 transfer pathway include formylmethanofuran dehydrogenase subunits, methenyltetrahydromethanopterin cyclohydrolase, etc. Tetrahydromethanopterin, a tetrahydrofolate analog, occurs in methanogenic archaea, bacterial methanotrophs, planctomycetes, and a few other lineages.
Probab=52.63 E-value=9.7 Score=42.19 Aligned_cols=20 Identities=25% Similarity=0.363 Sum_probs=17.8
Q ss_pred cceEEEEEeCCceEEEEEEE
Q psy6736 634 ERNVLIFDLGGGTFDVSILT 653 (1023)
Q Consensus 634 ~~~vlV~D~GggT~dvsi~~ 653 (1023)
-.+++++||||.|+|++++.
T Consensus 127 ~~~~I~~DmGGTTtDi~~i~ 146 (318)
T TIGR03123 127 IPECLFVDMGSTTTDIIPII 146 (318)
T ss_pred CCCEEEEEcCccceeeEEec
Confidence 45599999999999999986
No 220
>PRK00976 hypothetical protein; Provisional
Probab=51.94 E-value=57 Score=36.18 Aligned_cols=50 Identities=20% Similarity=0.325 Sum_probs=38.6
Q ss_pred CcCeEEEEcCCCCcH--HHHHHHHHHcCCccccccCCCchhHHhHHHHHHHHHhC
Q psy6736 315 QIHDIVLVGGSTRIP--KVQKLLQDFFNGKELNKSINPDEAVAYGAAVQAAILHG 367 (1023)
Q Consensus 315 ~i~~V~LvGG~sr~p--~v~~~l~~~f~~~~i~~~~~pd~aVa~GAa~~a~~l~~ 367 (1023)
|++.|+|-||-++.+ .+.+.+++.+. .. ...-...+-++|||+.|..+.+
T Consensus 263 DPe~IVLGGGVS~~~e~~L~~~I~e~l~-~~--~a~LG~dAGaiGAA~iA~~i~~ 314 (326)
T PRK00976 263 PEDNVVLAGSVGEMDEPDVSERIKELLD-KK--VLVLGKESAAIGLALIARDIFN 314 (326)
T ss_pred CCCEEEEcCccccCchhHHHHHHHHHhc-cc--ccccCCchHHHHHHHHHHHHhC
Confidence 468899999999998 88899988873 22 2223458999999999876654
No 221
>PF03630 Fumble: Fumble ; InterPro: IPR004567 Pantothenate kinase (PanK or CoaA) catalyses the first step of the universal five step coenzyme A (CoA) biosynthesis pathway. CoA is a ubiquitous and essential cofactor in all living organsims. Pantothenate kinase catalyses the first and rate limiting step in the CoA biosynthetic pathway, which involves transferring a phosphoryl group from ATP to pantothenate, also known as vitamin B5. Three distinct types of pantothenate kinase enzymes have been identified: type I PanK enzymes are typified by the E. coli CoaA protein, type II enzymes are primarily found in eukaryotic organisms whilst type III enzymes have a wider phylogenic distribution and are not feedback inhibited by CoA []. This family describes the type II (primarily eukaryotic) form of pantothenate kinase PanK, characterised from the fungus Emericella nidulans and with similar forms known in several other eukaryotes. It also includes forms from several Gram-positive bacteria suggested to have originated from the eukaryotic form by lateral transfer. It differs in a number of biochemical properties (such as inhibition by acetyl-CoA) from type I PanK enzymes and shows little sequence similarity [, ].; GO: 0004594 pantothenate kinase activity, 0005524 ATP binding, 0015937 coenzyme A biosynthetic process; PDB: 3SMP_B 2I7N_B 2EWS_B 2I7P_C 3SMS_A 3MK6_D.
Probab=51.79 E-value=1.1e+02 Score=34.59 Aligned_cols=156 Identities=20% Similarity=0.300 Sum_probs=0.0
Q ss_pred CCCCcceEEEEEeCCceEEEEEEEEe-CCEEEEEEecCCCCCcHHHHHHHHHHHHHHHHHhhhccCcchhHHHHHHHHHH
Q psy6736 630 EGSGERNVLIFDLGGGTFDVSILTIE-DGIFEVKSTAGDTHLGGEDFDNRMVNHFVQEFKRKYKKDLTTNKRALRRLRTA 708 (1023)
Q Consensus 630 ~~~~~~~vlV~D~GggT~dvsi~~~~-~~~~~v~~~~gd~~lGG~~~D~~l~~~~~~~~~~~~~~~~~~~~~~~~~L~~~ 708 (1023)
+....-.+|++.+|.| +|+++++ ++.++-++-.+ +||-.| .-+.+|+..
T Consensus 151 ~~~~~~PyllvniGsG---vSi~~v~~~~~~~rvgGs~---iGGgT~------------------------~GL~~llt~ 200 (341)
T PF03630_consen 151 DNSDIYPYLLVNIGSG---VSILKVEGPNQFERVGGSS---IGGGTF------------------------WGLCSLLTG 200 (341)
T ss_dssp TTSS-SSEEEEEESSS---EEEEEEEETTEEEEEEEES----SHHHH------------------------HHHHHHHH-
T ss_pred CCCCCCcEEEEEcCCc---eEEEEEeCCCceEEEeccc---cchHhH------------------------HHHHHHhcC
Q ss_pred HHHHhhhc-----CCCceeEEEEecccCCc----------------------ceEEEecHHHHHHHHHHHHHHHHHHHHH
Q psy6736 709 CERAKRTL-----SSSTQASIEIDSLFEGV----------------------DFYTSITRARFEELNADLFRGTMEPVEK 761 (1023)
Q Consensus 709 ~e~~K~~L-----s~~~~~~~~i~~~~~~~----------------------~~~~~itr~~~~~~~~~~~~~~~~~i~~ 761 (1023)
++...+.+ ..+..+++-+.+++.+. .-.-.++++++..-.-.++...+..+.-
T Consensus 201 ~~~~~e~~~la~~G~~~~vDllV~DIyg~~y~~~~L~~~~~AssFGk~~~~~~~~~~~~~~Dia~sll~mv~~nIg~la~ 280 (341)
T PF03630_consen 201 CKSFDEILELAKKGDNSNVDLLVGDIYGGDYNKIGLPGDLTASSFGKVQSKAKRKDSFSKEDIAKSLLNMVSNNIGQLAY 280 (341)
T ss_dssp --SHHHHHHHHHH--GGGTSEEHHHHHSS-BGGGTB-TTSEEETTCCGGSHHHH-CC--HHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCHHHHHHHhcCCCccccCceeeeccCCCcccCCCCHHHHHhhhhhhhhcccccccCCHHHHHHHHHHHHHHHHHHHHH
Q ss_pred HHHHcCCCccccceEEEecCccCc-HHHHHHHH---Hhh--cCcccCCCCCCccceecchHHHH
Q psy6736 762 SLRDAKMDKAQIHDIVLVGGSTRI-PKVQKLLQ---DFF--NGKELNKSINPDEAVAYGAAVQA 819 (1023)
Q Consensus 762 ~l~~~~~~~~~i~~V~LvGG~sri-p~v~~~l~---~~f--~~~~~~~~~~p~~aVa~GAa~~a 819 (1023)
...+. ..++.|+++|...|. |...+.|. +++ +..++....+...+-|.||.+..
T Consensus 281 l~A~~----~~~~~I~f~G~~~~~~~~~~~~l~~a~~~~s~~~~~~~fl~h~gy~galGa~l~~ 340 (341)
T PF03630_consen 281 LHAKI----HGVKRIVFGGSFIRNNPITMRTLSYAINFWSKGELKALFLRHEGYLGALGAFLKH 340 (341)
T ss_dssp HHHHH----HT--EEEEESGGGTSSCHHHHHHHHHHHHHTTTS-EEEEETTTTSHHHHHHHHTH
T ss_pred HHHHH----cCCCEEEEEeccccCCHHHHHHHHHHHHHhccCCceEEEecCCchhHHHHHHHhc
No 222
>cd06007 R3H_DEXH_helicase R3H domain of a group of proteins which also contain a DEXH-box helicase domain, and may function as ATP-dependent DNA or RNA helicases. The name of the R3H domain comes from the characteristic spacing of the most conserved arginine and histidine residues. The function of the domain is predicted to bind ssDNA or ssRNA in a sequence-specific manner.
Probab=50.76 E-value=44 Score=26.94 Aligned_cols=37 Identities=16% Similarity=0.062 Sum_probs=30.8
Q ss_pred HHHHhCCcCCcceEecCCCCCHHHHHHHHHHHHHcCCce
Q psy6736 107 SEDILRKVDGQNEGLIPAYFNISSVKSTKDSGTIAGLNV 145 (1023)
Q Consensus 107 a~~~~~~~~~~~vitVPa~~~~~qr~~l~~Aa~~AGl~~ 145 (1023)
.+.+.... .-.++-|+.++..+|..+.+.|...||..
T Consensus 8 i~~F~~~~--~~~l~Fpp~ls~~eR~~vH~~a~~~gL~s 44 (59)
T cd06007 8 LEDFRASD--NEEYEFPSSLTNHERAVIHRLCRKLGLKS 44 (59)
T ss_pred HHHHHcCc--ccEEEcCCCCCHHHHHHHHHHHHHcCCCc
Confidence 34455433 78899999999999999999999999875
No 223
>PRK09585 anmK anhydro-N-acetylmuramic acid kinase; Reviewed
Probab=50.10 E-value=42 Score=38.07 Aligned_cols=48 Identities=23% Similarity=0.340 Sum_probs=33.2
Q ss_pred cceEEEecCccCcHHHHHHHHHhhcCcccCC----CCCCccceecchHHHHHH
Q psy6736 773 IHDIVLVGGSTRIPKVQKLLQDFFNGKELNK----SINPDEAVAYGAAVQAAI 821 (1023)
Q Consensus 773 i~~V~LvGG~srip~v~~~l~~~f~~~~~~~----~~~p~~aVa~GAa~~a~~ 821 (1023)
.+.|+++||+++.|++.++|++.++ .++.. .++||.-=|..-|++|..
T Consensus 287 ~~~vlv~GGGa~N~~Lm~~L~~~l~-~~v~~~~~~G~~~da~EA~aFA~La~~ 338 (365)
T PRK09585 287 PDELLVCGGGARNPTLMERLAALLP-TEVATTDALGIDGDAKEALAFAWLAVR 338 (365)
T ss_pred CCEEEEECCCcchHHHHHHHHHhcC-CcccCHHHcCCChhHHHHHHHHHHHHH
Confidence 4689999999999999999999985 33321 134554334444566643
No 224
>cd02640 R3H_NRF R3H domain of the NF-kappaB-repression factor (NRF). NRF is a nuclear inhibitor of NF-kappaB proteins that can silence the IFNbeta promoter via binding to a negative regulatory element (NRE). Beside R3H NRF also contains a G-patch domain. The name of the R3H domain comes from the characteristic spacing of the most conserved arginine and histidine residues. The function of the domain is predicted to bind ssDNA or ssRNA in a sequence-specific manner.
Probab=48.20 E-value=56 Score=26.47 Aligned_cols=42 Identities=7% Similarity=0.045 Sum_probs=33.4
Q ss_pred HHHHHHHHhCCcCCcceEecCCCCCHHHHHHHHHHHHHcCCce
Q psy6736 103 KKKTSEDILRKVDGQNEGLIPAYFNISSVKSTKDSGTIAGLNV 145 (1023)
Q Consensus 103 l~~~a~~~~~~~~~~~vitVPa~~~~~qr~~l~~Aa~~AGl~~ 145 (1023)
+.+..+.+.... ..-.++.|+.++..+|..+.+.|+..||+.
T Consensus 4 ~~~~i~~F~~s~-~~~~l~f~p~lt~~eR~~vH~~a~~~gL~s 45 (60)
T cd02640 4 YRQIIQNYAHSD-DIRDMVFSPEFSKEERALIHQIAQKYGLKS 45 (60)
T ss_pred HHHHHHHHHcCC-ccceEEcCCCCCHHHHHHHHHHHHHcCCce
Confidence 344455555433 467899999999999999999999999876
No 225
>KOG0797|consensus
Probab=47.26 E-value=20 Score=41.30 Aligned_cols=50 Identities=26% Similarity=0.393 Sum_probs=36.4
Q ss_pred cceEEEecCccCcHHHHHHHHHhhcC-----cc---------cCCCCCCccceecchHHHHHHH
Q psy6736 773 IHDIVLVGGSTRIPKVQKLLQDFFNG-----KE---------LNKSINPDEAVAYGAAVQAAIL 822 (1023)
Q Consensus 773 i~~V~LvGG~srip~v~~~l~~~f~~-----~~---------~~~~~~p~~aVa~GAa~~a~~l 822 (1023)
-+.|++|||+...|.+...|++..-. .. ..+..||...+=+|||++|.+-
T Consensus 527 ~sSil~Vgga~~~~g~~~~LEeRi~n~~pp~~~~I~~VsVip~prdMdp~~VaWKGaaIla~l~ 590 (618)
T KOG0797|consen 527 FSSILLVGGAGLFPGLVAALEERILNAIPPGREAIDTVSVIPPPRDMDPQFVAWKGAAILAILD 590 (618)
T ss_pred hhHHHhhcccccchhHHHHHHHHHhccCCccccccCceeecCCCcCCCchheEecchhhhhHHH
Confidence 46789999999999998888876531 11 1233688888889999988654
No 226
>TIGR03123 one_C_unchar_1 probable H4MPT-linked C1 transfer pathway protein. This protein family was identified, by the method of partial phylogenetic profiling, as related to the use of tetrahydromethanopterin (H4MPT) as a C-1 carrier. Characteristic markers of the H4MPT-linked C1 transfer pathway include formylmethanofuran dehydrogenase subunits, methenyltetrahydromethanopterin cyclohydrolase, etc. Tetrahydromethanopterin, a tetrahydrofolate analog, occurs in methanogenic archaea, bacterial methanotrophs, planctomycetes, and a few other lineages.
Probab=47.18 E-value=13 Score=41.28 Aligned_cols=19 Identities=26% Similarity=0.379 Sum_probs=17.1
Q ss_pred EEEEEEeCCceEEEEEEEE
Q psy6736 179 NVLIFDLGGGTFDVSILTI 197 (1023)
Q Consensus 179 ~vlV~D~GggT~dvsv~~~ 197 (1023)
+++++||||.|||++++.-
T Consensus 129 ~~I~~DmGGTTtDi~~i~~ 147 (318)
T TIGR03123 129 ECLFVDMGSTTTDIIPIID 147 (318)
T ss_pred CEEEEEcCccceeeEEecC
Confidence 4899999999999999864
No 227
>KOG2708|consensus
Probab=46.81 E-value=1.7e+02 Score=30.27 Aligned_cols=65 Identities=12% Similarity=0.244 Sum_probs=42.8
Q ss_pred HHHHHHHHHHHHHHHHHcCCCccCcCeEEEEcCCCCcHHHHHHHHHHcCCcc-ccccCCCchhHHhHHHHH
Q psy6736 292 ADLFRGTMEPVEKSLRDAKMDKAQIHDIVLVGGSTRIPKVQKLLQDFFNGKE-LNKSINPDEAVAYGAAVQ 361 (1023)
Q Consensus 292 ~~~~~~i~~~i~~~l~~~~~~~~~i~~V~LvGG~sr~p~v~~~l~~~f~~~~-i~~~~~pd~aVa~GAa~~ 361 (1023)
+.+|.-+++.-++++...+. +.|++|||-+..-.+|++......... ....-|-..|+-.|+-+.
T Consensus 236 EtvFamLVEiTERAMAh~~s-----~evLIVGGVGCN~RLQeMM~~Mc~eRgg~~faTDeRfCIDNG~MIA 301 (336)
T KOG2708|consen 236 ETVFAMLVEITERAMAHCGS-----KEVLIVGGVGCNERLQEMMAIMCSERGGKLFATDERFCIDNGVMIA 301 (336)
T ss_pred HHHHHHHHHHHHHHHhhcCC-----CcEEEEecccccHHHHHHHHHHHHhcCCceEecccceeeeCchHHH
Confidence 33455555666666665543 679999999999999999988763221 122335566777777653
No 228
>COG0533 QRI7 Metal-dependent proteases with possible chaperone activity [Posttranslational modification, protein turnover, chaperones]
Probab=46.78 E-value=82 Score=35.07 Aligned_cols=51 Identities=20% Similarity=0.464 Sum_probs=37.4
Q ss_pred HHHHHHHHHH----HHHHHHHHHHHHHHHcCCCccccceEEEecCccCcHHHHHHHHHhh
Q psy6736 741 RARFEELNAD----LFRGTMEPVEKSLRDAKMDKAQIHDIVLVGGSTRIPKVQKLLQDFF 796 (1023)
Q Consensus 741 r~~~~~~~~~----~~~~~~~~i~~~l~~~~~~~~~i~~V~LvGG~srip~v~~~l~~~f 796 (1023)
.++.++++.. .++-+++.++++|+..+. +.++++||-+....+|+++++..
T Consensus 231 ~~d~~dia~sfQ~av~~~L~~kt~rAl~~~~~-----~~lvi~GGVaaN~~LR~~l~~~~ 285 (342)
T COG0533 231 EEDKEDIAASFQEAVFDMLVEKTERALKHTGK-----KELVIAGGVAANSRLREMLEEMC 285 (342)
T ss_pred hhhHHHHHHHHHHHHHHHHHHHHHHHHHHhCC-----CEEEEeccHHHhHHHHHHHHHHH
Confidence 3444444433 455566777777776654 66999999999999999999876
No 229
>PRK00976 hypothetical protein; Provisional
Probab=46.39 E-value=42 Score=37.19 Aligned_cols=50 Identities=18% Similarity=0.297 Sum_probs=38.5
Q ss_pred ccceEEEecCccCcH--HHHHHHHHhhcCcccCCCCCCccceecchHHHHHHHhC
Q psy6736 772 QIHDIVLVGGSTRIP--KVQKLLQDFFNGKELNKSINPDEAVAYGAAVQAAILHG 824 (1023)
Q Consensus 772 ~i~~V~LvGG~srip--~v~~~l~~~f~~~~~~~~~~p~~aVa~GAa~~a~~l~~ 824 (1023)
+++.|+|-||-|+++ .+.+.+++.+.. . ...-...+-++|||+.|..+.+
T Consensus 263 DPe~IVLGGGVS~~~e~~L~~~I~e~l~~-~--~a~LG~dAGaiGAA~iA~~i~~ 314 (326)
T PRK00976 263 PEDNVVLAGSVGEMDEPDVSERIKELLDK-K--VLVLGKESAAIGLALIARDIFN 314 (326)
T ss_pred CCCEEEEcCccccCchhHHHHHHHHHhcc-c--ccccCCchHHHHHHHHHHHHhC
Confidence 478899999999998 788888888732 2 2233458999999999976643
No 230
>PF14574 DUF4445: Domain of unknown function (DUF4445); PDB: 3ZYY_X.
Probab=46.22 E-value=45 Score=38.51 Aligned_cols=86 Identities=16% Similarity=0.148 Sum_probs=50.9
Q ss_pred ceeEEEecHHHHHHHhHHHHHHHHHHHHHHHHHcCCCccCcCeEEEEcCCCCcHHHHHHHH-HHcCCccccccCCCchhH
Q psy6736 276 VDFYTSITRARFEELNADLFRGTMEPVEKSLRDAKMDKAQIHDIVLVGGSTRIPKVQKLLQ-DFFNGKELNKSINPDEAV 354 (1023)
Q Consensus 276 ~~~~~~itr~~~e~~~~~~~~~i~~~i~~~l~~~~~~~~~i~~V~LvGG~sr~p~v~~~l~-~~f~~~~i~~~~~pd~aV 354 (1023)
..-.+.||..+++++.. --..+..-++-.|++++++.+||+.|+|.||++.-=-+.+++. -.+|.....+..-.-.++
T Consensus 289 ~~~~i~itq~DIr~~ql-AKaAi~aGi~~Ll~~agi~~~di~~v~lAG~FG~~l~~~~a~~iGLlP~~~~~kv~~~GN~a 367 (412)
T PF14574_consen 289 IGDDIYITQKDIREFQL-AKAAIRAGIEILLEEAGISPEDIDRVYLAGGFGNYLDPESAIRIGLLPDVPAEKVRFVGNAA 367 (412)
T ss_dssp SSS-EEEEHHHHHHHHH-HHHHHHHHHHHHHHHTT--GGG--EEEEECSS-SEEEHHHHHHTTSS--S-GGGEEEEC-HH
T ss_pred CCCCEEEeHHHHHHHHH-HHHHHHHHHHHHHHHcCCCHHHccEEEEeCcccccCCHHHHhhcCCCCCccccCEEEECcHH
Confidence 34468899999987532 2344566778889999999999999999999999777777765 334433222222223356
Q ss_pred HhHHHHHH
Q psy6736 355 AYGAAVQA 362 (1023)
Q Consensus 355 a~GAa~~a 362 (1023)
-.||.+..
T Consensus 368 l~GA~~~L 375 (412)
T PF14574_consen 368 LAGARMAL 375 (412)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHh
Confidence 66766543
No 231
>COG0248 GppA Exopolyphosphatase [Nucleotide transport and metabolism / Inorganic ion transport and metabolism]
Probab=46.12 E-value=33 Score=40.56 Aligned_cols=20 Identities=25% Similarity=0.596 Sum_probs=17.9
Q ss_pred cceEEEEEeCCceEEEEEEE
Q psy6736 634 ERNVLIFDLGGGTFDVSILT 653 (1023)
Q Consensus 634 ~~~vlV~D~GggT~dvsi~~ 653 (1023)
....+|+|+|||++.+++..
T Consensus 128 ~~~~lv~DIGGGStEl~~g~ 147 (492)
T COG0248 128 KGDGLVIDIGGGSTELVLGD 147 (492)
T ss_pred CCCEEEEEecCCeEEEEEec
Confidence 45699999999999999986
No 232
>PRK11031 guanosine pentaphosphate phosphohydrolase; Provisional
Probab=46.07 E-value=27 Score=41.74 Aligned_cols=38 Identities=18% Similarity=0.243 Sum_probs=25.4
Q ss_pred eEEEEEeCCceEEEEEEEEeCCEEEEEEecCCCCCcHHHHHHH
Q psy6736 636 NVLIFDLGGGTFDVSILTIEDGIFEVKSTAGDTHLGGEDFDNR 678 (1023)
Q Consensus 636 ~vlV~D~GggT~dvsi~~~~~~~~~v~~~~gd~~lGG~~~D~~ 678 (1023)
+.+|+|+|||++.+++++ ++.+.-.. .-.+|.-.+.+.
T Consensus 133 ~~lviDIGGGStEl~~~~--~~~~~~~~---Sl~lG~vrl~e~ 170 (496)
T PRK11031 133 QRLVVDIGGASTELVTGT--GAQATSLF---SLSMGCVTWLER 170 (496)
T ss_pred CEEEEEecCCeeeEEEec--CCceeeee---EEeccchHHHHH
Confidence 489999999999999876 44332221 245777665444
No 233
>PRK03011 butyrate kinase; Provisional
Probab=45.84 E-value=23 Score=40.27 Aligned_cols=46 Identities=22% Similarity=0.247 Sum_probs=35.3
Q ss_pred ccceEEEecCccCcHHHHHHHHHhhc---CcccCCCCCCccceecchHH
Q psy6736 772 QIHDIVLVGGSTRIPKVQKLLQDFFN---GKELNKSINPDEAVAYGAAV 817 (1023)
Q Consensus 772 ~i~~V~LvGG~srip~v~~~l~~~f~---~~~~~~~~~p~~aVa~GAa~ 817 (1023)
++|.|+|.||.+..+.+++.|.+.+. ...+....+-.+|.+.||+.
T Consensus 295 dpD~IVlgGGI~~~~~l~~~I~~~l~~~~pv~i~p~~~e~~A~a~GA~r 343 (358)
T PRK03011 295 KVDAIVLTGGLAYSKRLVERIKERVSFIAPVIVYPGEDEMEALAEGALR 343 (358)
T ss_pred CCCEEEEeCccccCHHHHHHHHHHHHhhCCeEEEeCCCHHHHHHHHHHH
Confidence 68999999999999999998888763 23344455556799999763
No 234
>PRK10854 exopolyphosphatase; Provisional
Probab=42.34 E-value=28 Score=41.84 Aligned_cols=19 Identities=32% Similarity=0.620 Sum_probs=17.1
Q ss_pred ceEEEEEeCCceEEEEEEE
Q psy6736 635 RNVLIFDLGGGTFDVSILT 653 (1023)
Q Consensus 635 ~~vlV~D~GggT~dvsi~~ 653 (1023)
++.+|+|+|||++.+++++
T Consensus 137 ~~~lvvDIGGGStEl~~~~ 155 (513)
T PRK10854 137 GRKLVIDIGGGSTELVIGE 155 (513)
T ss_pred CCeEEEEeCCCeEEEEEec
Confidence 4689999999999999976
No 235
>COG0145 HyuA N-methylhydantoinase A/acetone carboxylase, beta subunit [Amino acid transport and metabolism / Secondary metabolites biosynthesis, transport, and catabolism]
Probab=39.97 E-value=24 Score=43.38 Aligned_cols=18 Identities=39% Similarity=0.923 Sum_probs=16.9
Q ss_pred eEEEEEeCCceEEEEEEE
Q psy6736 636 NVLIFDLGGGTFDVSILT 653 (1023)
Q Consensus 636 ~vlV~D~GggT~dvsi~~ 653 (1023)
+++++||||.|+|++++.
T Consensus 279 ~~i~~DmGGTStDva~i~ 296 (674)
T COG0145 279 NAIVFDMGGTSTDVALII 296 (674)
T ss_pred CEEEEEcCCcceeeeeee
Confidence 699999999999999886
No 236
>COG5026 Hexokinase [Carbohydrate transport and metabolism]
Probab=39.03 E-value=1.2e+02 Score=34.84 Aligned_cols=32 Identities=31% Similarity=0.686 Sum_probs=25.8
Q ss_pred CCcceEEEEEeCCceEEEEEEEEe-CCEEEEEE
Q psy6736 632 SGERNVLIFDLGGGTFDVSILTIE-DGIFEVKS 663 (1023)
Q Consensus 632 ~~~~~vlV~D~GggT~dvsi~~~~-~~~~~v~~ 663 (1023)
.+.+.+|++|+||..|-+++|++. ++.+++..
T Consensus 72 ~e~g~~LaiD~GGTnlRvc~V~l~g~gt~~~~~ 104 (466)
T COG5026 72 NESGSVLAIDLGGTNLRVCLVVLGGDGTFDIEQ 104 (466)
T ss_pred CCCCCEEEEecCCceEEEEEEEeCCCCCccccc
Confidence 456789999999999999999997 45555443
No 237
>COG1521 Pantothenate kinase type III (Bvg accessory factor family protein) [Transcription]
Probab=38.71 E-value=75 Score=33.96 Aligned_cols=44 Identities=20% Similarity=0.357 Sum_probs=32.0
Q ss_pred HHHHHHHhHHHHHHHHHHHHHHHHHcCCCccCcCeEEEEcCCCC
Q psy6736 284 RARFEELNADLFRGTMEPVEKSLRDAKMDKAQIHDIVLVGGSTR 327 (1023)
Q Consensus 284 r~~~e~~~~~~~~~i~~~i~~~l~~~~~~~~~i~~V~LvGG~sr 327 (1023)
++..+.+...++......|+..+++.......=+.++++||.++
T Consensus 181 k~T~~aiqsG~v~g~~~~i~~~~~~~k~~~~~~~~~vltGg~~~ 224 (251)
T COG1521 181 KNTVEAIQSGVVYGYVGLIEGLLKEIKEELKGGDAVVLTGGLAK 224 (251)
T ss_pred cchHHHHHHhHHHHHHHHHHHHHHHHHHHhCCCCeEEEeCCchH
Confidence 45677777778888888888887776543323477999999865
No 238
>PRK07058 acetate kinase; Provisional
Probab=38.33 E-value=1.2e+02 Score=34.64 Aligned_cols=45 Identities=7% Similarity=0.093 Sum_probs=32.0
Q ss_pred hHHHHHHHHHHHHHHHHHcCCCccCcCeEEEEcCCC-CcHHHHHHHHHHc
Q psy6736 291 NADLFRGTMEPVEKSLRDAKMDKAQIHDIVLVGGST-RIPKVQKLLQDFF 339 (1023)
Q Consensus 291 ~~~~~~~i~~~i~~~l~~~~~~~~~i~~V~LvGG~s-r~p~v~~~l~~~f 339 (1023)
++-++.++.+.|-...... ..+|.|+++||-+ ..+.|++.|.+.+
T Consensus 298 ~d~f~yri~k~IGa~~a~L----g~vDaiVfTGGIgEns~~vr~~i~~~l 343 (396)
T PRK07058 298 LDLFALRIAGEIARLAATL----GGLDAVVFTAGIGEHQPAIRAAVCERL 343 (396)
T ss_pred HHHHHHHHHHHHHHHHHHh----CCCCEEEECCccccCcHHHHHHHHhhh
Confidence 3334455555444443332 3589999999999 9999999999876
No 239
>COG4012 Uncharacterized protein conserved in archaea [Function unknown]
Probab=38.31 E-value=2.1e+02 Score=30.41 Aligned_cols=85 Identities=16% Similarity=0.266 Sum_probs=47.8
Q ss_pred cCCCCCHHHHHHHHHHHHHc---CCceeeeecchHHHHHHhccccccCccccccCCCCCcEEEEEEeCCceEEEEEEEEe
Q psy6736 122 IPAYFNISSVKSTKDSGTIA---GLNVLRIINEPTAAAIAYGLDKKVGSTAVEYNGSGERNVLIFDLGGGTFDVSILTIE 198 (1023)
Q Consensus 122 VPa~~~~~qr~~l~~Aa~~A---Gl~~~~li~Ep~AAal~y~~~~~~~~~~~~~~~~~~~~vlV~D~GggT~dvsv~~~~ 198 (1023)
+|.+|+ .|+.|+..| |-. ..+++--.||+.....+. .....+|+|+|-|++..+++.-
T Consensus 186 iPe~Ft-----RMraaa~sal~~~t~-av~mDskfaav~gal~dp------------aa~palvVd~GngHttaalvde- 246 (342)
T COG4012 186 IPESFT-----RMRAAAMSALSAGTD-AVAMDSKFAAVMGALVDP------------AADPALVVDYGNGHTTAALVDE- 246 (342)
T ss_pred CchhHH-----HHHHHHHHHHhcCce-EEEEcchhHhhhhcccCc------------ccCceEEEEccCCceEEEEecC-
Confidence 566665 355544443 332 456666667766555543 2346899999999998888753
Q ss_pred CCEEEEEEecCCCCccHHHHHHHHHHHH
Q psy6736 199 DGIFEVKSTAGDTHLGGEDFDNRMVNHF 226 (1023)
Q Consensus 199 ~~~~~v~~~~~~~~lGG~~~D~~l~~~l 226 (1023)
+.+.-+.......+.-..|-..|..+.
T Consensus 247 -dRI~gv~EHHT~~Lspekled~I~rf~ 273 (342)
T COG4012 247 -DRIVGVYEHHTIRLSPEKLEDQIIRFV 273 (342)
T ss_pred -CeEEEEeecccccCCHHHHHHHHHHHH
Confidence 333322222224455544444444333
No 240
>TIGR00143 hypF [NiFe] hydrogenase maturation protein HypF. A previously described regulatory effect of HypF mutatation is attributable to loss of activity of a regulatory hydrogenase. A zinc finger-like region CXXCX(18)CXXCX(24)CXXCX(18)CXXC region further supported the regulatory hypothesis. However, more recent work (PUBMED:11375153) shows the direct effect is on the activity of expressed hydrogenases with nickel/iron centers, rather than on expression.
Probab=38.17 E-value=33 Score=42.75 Aligned_cols=49 Identities=29% Similarity=0.364 Sum_probs=36.3
Q ss_pred ccceEEEecCccCcHHHHHHHHHhhcC--cccCCC---CCCccceecchHHHHH
Q psy6736 772 QIHDIVLVGGSTRIPKVQKLLQDFFNG--KELNKS---INPDEAVAYGAAVQAA 820 (1023)
Q Consensus 772 ~i~~V~LvGG~srip~v~~~l~~~f~~--~~~~~~---~~p~~aVa~GAa~~a~ 820 (1023)
.++.|+|+||..+..++++.|.+.+.. .++..+ .--|.+++.|.|+.|+
T Consensus 658 g~~~VvLSGGVfqN~~L~~~L~~~L~~~g~~v~~p~~~p~nDgGislGQa~~a~ 711 (711)
T TIGR00143 658 GIHKIVISGGVFYNRLLLERLAKYLKGLGFQFLFHRHLPPGDGGISLGQAVAAA 711 (711)
T ss_pred CCCeEEEeccHHHHHHHHHHHHHHHHhCCCEEEccCCCCCCHHHHHHHHHHHhC
Confidence 467899999999999999999987742 222222 2347888999887763
No 241
>cd02646 R3H_G-patch R3H domain of a group of fungal and plant proteins with unknown function, who also contain a G-patch domain. The name of the R3H domain comes from the characteristic spacing of the most conserved arginine and histidine residues. The function of the R3H domain is predicted to bind ssDNA or ssRNA in a sequence-specific manner.
Probab=37.94 E-value=90 Score=24.98 Aligned_cols=42 Identities=14% Similarity=0.080 Sum_probs=33.0
Q ss_pred hHHHHHHHHHhCCcCCcceEecCCCCCHHHHHHHHHHHHHcCCce
Q psy6736 101 ILKKKTSEDILRKVDGQNEGLIPAYFNISSVKSTKDSGTIAGLNV 145 (1023)
Q Consensus 101 ~~l~~~a~~~~~~~~~~~vitVPa~~~~~qr~~l~~Aa~~AGl~~ 145 (1023)
..+.+..+.++... .-.++-|+ ++..+|+.+.+.|...||..
T Consensus 2 ~~i~~~i~~F~~~~--~~~~~fpp-m~~~~R~~vH~lA~~~~L~S 43 (58)
T cd02646 2 EDIKDEIEAFLLDS--RDSLSFPP-MDKHGRKTIHKLANCYNLKS 43 (58)
T ss_pred hHHHHHHHHHHhCC--CceEecCC-CCHHHHHHHHHHHHHcCCcc
Confidence 45566666666544 56779999 89999999999999999865
No 242
>PTZ00107 hexokinase; Provisional
Probab=35.51 E-value=3.8e+02 Score=31.68 Aligned_cols=26 Identities=19% Similarity=0.415 Sum_probs=22.6
Q ss_pred CCcceEEEEEeCCceEEEEEEEEeCC
Q psy6736 632 SGERNVLIFDLGGGTFDVSILTIEDG 657 (1023)
Q Consensus 632 ~~~~~vlV~D~GggT~dvsi~~~~~~ 657 (1023)
.+...+|.+|+||.+|-|.++++.++
T Consensus 71 ~E~G~fLAlDlGGTN~RV~~V~L~g~ 96 (464)
T PTZ00107 71 KEKGVYYAIDFGGTNFRAVRVSLRGG 96 (464)
T ss_pred CccceEEEEecCCceEEEEEEEeCCC
Confidence 44567999999999999999999764
No 243
>KOG1369|consensus
Probab=35.33 E-value=8.1e+02 Score=28.91 Aligned_cols=28 Identities=32% Similarity=0.642 Sum_probs=24.5
Q ss_pred CCCcceEEEEEeCCceEEEEEEEEeCCE
Q psy6736 631 GSGERNVLIFDLGGGTFDVSILTIEDGI 658 (1023)
Q Consensus 631 ~~~~~~vlV~D~GggT~dvsi~~~~~~~ 658 (1023)
..+.+.++.+|+||..|-|..+.+.++.
T Consensus 82 G~E~G~~lalDLGGTn~Rv~~v~L~g~~ 109 (474)
T KOG1369|consen 82 GTEKGKFLALDLGGTNFRVLLVKLGGGR 109 (474)
T ss_pred CCcCCCEEEEecCCCceEEEEEEecCCc
Confidence 4667889999999999999999998773
No 244
>cd02641 R3H_Smubp-2_like R3H domain of Smubp-2_like proteins. Smubp-2_like proteins also contain a helicase_like and an AN1-like Zinc finger domain and have been shown to bind single-stranded DNA. The name of the R3H domain comes from the characteristic spacing of the most conserved arginine and histidine residues. The function of the domain is predicted to bind ssDNA or ssRNA.
Probab=34.83 E-value=1.2e+02 Score=24.55 Aligned_cols=43 Identities=12% Similarity=0.062 Sum_probs=33.0
Q ss_pred HHHHHHHHHhCCcCCcceEecCCCCCHHHHHHHHHHHHHcCCce
Q psy6736 102 LKKKTSEDILRKVDGQNEGLIPAYFNISSVKSTKDSGTIAGLNV 145 (1023)
Q Consensus 102 ~l~~~a~~~~~~~~~~~vitVPa~~~~~qr~~l~~Aa~~AGl~~ 145 (1023)
++.+....+...+ ....+.-|+.++..||..+.+.|+..||..
T Consensus 3 ~~~~~i~~F~~~~-~~~~l~F~p~ls~~eR~~vH~lA~~~gL~s 45 (60)
T cd02641 3 HLKAMVKAFMKDP-KATELEFPPTLSSHDRLLVHELAEELGLRH 45 (60)
T ss_pred hHHHHHHHHHcCC-CcCcEECCCCCCHHHHHHHHHHHHHcCCce
Confidence 3444455555433 347899999999999999999999999865
No 245
>PF10458 Val_tRNA-synt_C: Valyl tRNA synthetase tRNA binding arm; InterPro: IPR019499 The aminoacyl-tRNA synthetases (6.1.1. from EC) catalyse the attachment of an amino acid to its cognate transfer RNA molecule in a highly specific two-step reaction. These proteins differ widely in size and oligomeric state, and have limited sequence homology []. The 20 aminoacyl-tRNA synthetases are divided into two classes, I and II. Class I aminoacyl-tRNA synthetases contain a characteristic Rossman fold catalytic domain and are mostly monomeric []. Class II aminoacyl-tRNA synthetases share an anti-parallel beta-sheet fold flanked by alpha-helices [], and are mostly dimeric or multimeric, containing at least three conserved regions [, , ]. However, tRNA binding involves an alpha-helical structure that is conserved between class I and class II synthetases. In reactions catalysed by the class I aminoacyl-tRNA synthetases, the aminoacyl group is coupled to the 2'-hydroxyl of the tRNA, while, in class II reactions, the 3'-hydroxyl site is preferred. The synthetases specific for arginine, cysteine, glutamic acid, glutamine, isoleucine, leucine, methionine, tyrosine, tryptophan and valine belong to class I synthetases. The synthetases specific for alanine, asparagine, aspartic acid, glycine, histidine, lysine, phenylalanine, proline, serine, and threonine belong to class-II synthetases []. Based on their mode of binding to the tRNA acceptor stem, both classes of tRNA synthetases have been subdivided into three subclasses, designated 1a, 1b, 1c and 2a, 2b, 2c. This entry represents the C-terminal domain of Valyl-tRNA synthetase, which consists of two helices in a long alpha-hairpin. Valyl-tRNA synthetase (6.1.1.9 from EC) is an alpha monomer that belongs to class Ia.; GO: 0000166 nucleotide binding, 0004832 valine-tRNA ligase activity, 0005524 ATP binding, 0006438 valyl-tRNA aminoacylation, 0005737 cytoplasm; PDB: 1IVS_B 1GAX_B.
Probab=34.25 E-value=1.5e+02 Score=24.48 Aligned_cols=45 Identities=11% Similarity=0.155 Sum_probs=30.2
Q ss_pred HHHHHHhHHHHHHHHHhhhhhhhhhccCCHHHHHHHHHhhHHHHH
Q psy6736 520 VISAKNSLESYCFNMKSTVEDEKLKDKISDAERTQILDKCNDVIK 564 (1023)
Q Consensus 520 ~~~a~N~lE~~iy~~~~~l~~~~~~~~~~~~e~~~l~~~l~~~~~ 564 (1023)
+......++..+-.+...|.++.|....+++-.+.-...+.++..
T Consensus 9 L~Kel~kl~~~i~~~~~kL~n~~F~~kAP~eVve~er~kl~~~~~ 53 (66)
T PF10458_consen 9 LEKELEKLEKEIERLEKKLSNENFVEKAPEEVVEKEREKLEELEE 53 (66)
T ss_dssp HHHHHHHHHHHHHHHHHHHCSTTHHHHS-CCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHcCccccccCCHHHHHHHHHHHHHHHH
Confidence 344455677777788888888888888887766666665555444
No 246
>TIGR03723 bact_gcp putative glycoprotease GCP. This model represents bacterial members of a protein family that is widely distributed. In a few pathogenic species, the protein is exported in a way that may represent an exceptional secondary function. This model plus companion (archaeal) model TIGR03722 together span the prokaryotic member sequences of TIGR00329, a protein family that appears universal in life, and whose broad function is unknown. A member of TIGR03722 has been characterized as a DNA-binding protein with apurinic endopeptidase activity. In contrast, the rare characterized members of the present family show O-sialoglycoprotein endopeptidase (EC. 3.4.24.57) activity after export. These include glycoprotease (gcp) from Pasteurella haemolytica A1 and a cohemolysin from Riemerella anatipestifer (GB|AAG39646.1). The member from Staphylococcus aureus is essential and is related to cell wall dynamics and the modulation of autolysis, but members are also found in the Mycoplasmas
Probab=34.14 E-value=90 Score=34.79 Aligned_cols=55 Identities=20% Similarity=0.336 Sum_probs=37.1
Q ss_pred HHHHHHHHHcCCCccCcCeEEEEcCCCCcHHHHHHHHHHcCC--ccccccC---CCchhHHhHHH
Q psy6736 300 EPVEKSLRDAKMDKAQIHDIVLVGGSTRIPKVQKLLQDFFNG--KELNKSI---NPDEAVAYGAA 359 (1023)
Q Consensus 300 ~~i~~~l~~~~~~~~~i~~V~LvGG~sr~p~v~~~l~~~f~~--~~i~~~~---~pd~aVa~GAa 359 (1023)
+.+..+++.. .++.|+|.||.+...++++.|.+.... ..+..+. --|.+++.|++
T Consensus 249 ~~~~~~~~~~-----~~~~v~lsGGVa~N~~l~~~l~~~~~~~~~~v~~~~~~p~~D~Gi~Ig~a 308 (314)
T TIGR03723 249 EKTKRALKKT-----GLKTLVVAGGVAANSRLRERLEELAEKAGLEVFIPPLELCTDNAAMIAAA 308 (314)
T ss_pred HHHHHHHHHh-----CCCeEEEeccHHHHHHHHHHHHHHHHHCCCEEECCCCCCCChHHHHHHHH
Confidence 4444444433 467899999999999999999988622 1332222 34778888876
No 247
>PRK09605 bifunctional UGMP family protein/serine/threonine protein kinase; Validated
Probab=33.57 E-value=1.2e+02 Score=36.81 Aligned_cols=51 Identities=14% Similarity=0.223 Sum_probs=36.9
Q ss_pred cCeEEEEcCCCCcHHHHHHHHHHcC--CccccccC---CCchhHHhHHHHHHHHHh
Q psy6736 316 IHDIVLVGGSTRIPKVQKLLQDFFN--GKELNKSI---NPDEAVAYGAAVQAAILH 366 (1023)
Q Consensus 316 i~~V~LvGG~sr~p~v~~~l~~~f~--~~~i~~~~---~pd~aVa~GAa~~a~~l~ 366 (1023)
++.|+|+||.+...++++.|.+.+. +.++..+. ..|.+++.|++.+.....
T Consensus 246 ~~~lvlsGGVa~N~~l~~~l~~~~~~~~~~v~~~~~~~~~D~g~~ia~a~~~~~~~ 301 (535)
T PRK09605 246 KDEVLLVGGVAANNRLREMLKEMCEERGADFYVPEPRFCGDNGAMIAWLGLLMYKA 301 (535)
T ss_pred CCeEEEeccHHHHHHHHHHHHHHHHHCCCEEECCCCccccchHHHHHHHHHHHHHc
Confidence 5789999999999999999996651 22343332 457888998886654443
No 248
>PF00349 Hexokinase_1: Hexokinase; InterPro: IPR022672 Hexokinase is an important enzyme that catalyses the ATP-dependent conversion of aldo- and keto-hexose sugars to the hexose-6-phosphate (H6P). The enzyme can catalyse this reaction on glucose, fructose, sorbitol and glucosamine, and as such is the first step in a number of metabolic pathways []. The addition of a phosphate group to the sugar acts to trap it in a cell, since the negatively charged phosphate cannot easily traverse the plasma membrane. The enzyme is widely distributed in eukaryotes. There are three isozymes of hexokinase in yeast (PI, PII and glucokinase): isozymes PI and PII phosphorylate both aldo- and keto-sugars; glucokinase is specific for aldo-hexoses. All three isozymes contain two domains []. Structural studies of yeast hexokinase reveal a well-defined catalytic pocket that binds ATP and hexose, allowing easy transfer of the phosphate from ATP to the sugar []. Vertebrates contain four hexokinase isozymes, designated I to IV, where types I to III contain a duplication of the two-domain yeast-type hexokinases. Both the N- and C-terminal halves bind hexose and H6P, though in types I an III only the C-terminal half supports catalysis, while both halves support catalysis in type II. The N-terminal half is the regulatory region. Type IV hexokinase is similar to the yeast enzyme in containing only the two domains, and is sometimes incorrectly referred to as glucokinase. The different vertebrate isozymes differ in their catalysis, localisation and regulation, thereby contributing to the different patterns of glucose metabolism in different tissues []. Whereas types I to III can phosphorylate a variety of hexose sugars and are inhibited by glucose-6-phosphate (G6P), type IV is specific for glucose and shows no G6P inhibition. Type I enzyme may have a catabolic function, producing H6P for energy production in glycolysis; it is bound to the mitochondrial membrane, which enables the coordination of glycolysis with the TCA cycle. Types II and III enzyme may have anabolic functions, providing H6P for glycogen or lipid synthesis. Type IV enzyme is found in the liver and pancreatic beta-cells, where it is controlled by insulin (activation) and glucagon (inhibition). In pancreatic beta-cells, type IV enzyme acts as a glucose sensor to modify insulin secretion. Mutations in type IV hexokinase have been associated with diabetes mellitus. Hexokinase (2.7.1.1 from EC), a fructose and glucose phosphorylating enzyme, contains two structurally similar domains represented by this family and PF03727 from PFAM. Some hexokinases have two copies of each of these domains. This entry represents the N-terminal domain.; GO: 0005524 ATP binding, 0016773 phosphotransferase activity, alcohol group as acceptor, 0005975 carbohydrate metabolic process; PDB: 3O1W_A 3O6W_A 3O4W_B 3O08_B 3O80_A 3O5B_A 3O8M_A 3O1B_A 1BG3_A 4DHY_A ....
Probab=32.80 E-value=58 Score=33.82 Aligned_cols=30 Identities=23% Similarity=0.537 Sum_probs=24.7
Q ss_pred CCcEEEEEEeCCceEEEEEEEEeCC-EEEEE
Q psy6736 176 GERNVLIFDLGGGTFDVSILTIEDG-IFEVK 205 (1023)
Q Consensus 176 ~~~~vlV~D~GggT~dvsv~~~~~~-~~~v~ 205 (1023)
+...+|++|+||.++-+.++++.+. .+++.
T Consensus 61 E~G~~LalDlGGTnlRv~~V~L~g~~~~~~~ 91 (206)
T PF00349_consen 61 EKGDFLALDLGGTNLRVALVELSGNGKVEIE 91 (206)
T ss_dssp TEEEEEEEEESSSSEEEEEEEEESSSEEEEE
T ss_pred CCceEEEEeecCcEEEEEEEEEcCCCCceee
Confidence 5678999999999999999999865 44443
No 249
>PLN02914 hexokinase
Probab=32.30 E-value=2.6e+02 Score=33.18 Aligned_cols=25 Identities=24% Similarity=0.393 Sum_probs=22.5
Q ss_pred CCcceEEEEEeCCceEEEEEEEEeC
Q psy6736 632 SGERNVLIFDLGGGTFDVSILTIED 656 (1023)
Q Consensus 632 ~~~~~vlV~D~GggT~dvsi~~~~~ 656 (1023)
.+...+|.+|+||.+|-|..+++.+
T Consensus 92 ~E~G~fLAlDlGGTNfRV~~V~L~g 116 (490)
T PLN02914 92 NEKGLFYALDLGGTNFRVLRVQLGG 116 (490)
T ss_pred CeeeEEEEEecCCceEEEEEEEecC
Confidence 5567899999999999999999976
No 250
>KOG2413|consensus
Probab=31.36 E-value=1.1e+02 Score=36.45 Aligned_cols=17 Identities=35% Similarity=0.614 Sum_probs=13.9
Q ss_pred cceEEEEEeCC----ceEEEE
Q psy6736 634 ERNVLIFDLGG----GTFDVS 650 (1023)
Q Consensus 634 ~~~vlV~D~Gg----gT~dvs 650 (1023)
+..+.+||-|+ ||||||
T Consensus 396 ~~kiyL~DSGaQY~DGTTDvT 416 (606)
T KOG2413|consen 396 PDKIYLCDSGAQYLDGTTDVT 416 (606)
T ss_pred CceEEEEccCcccccCcccee
Confidence 45688899998 889887
No 251
>PLN02377 3-ketoacyl-CoA synthase
Probab=30.56 E-value=1.3e+02 Score=35.77 Aligned_cols=54 Identities=6% Similarity=0.163 Sum_probs=41.8
Q ss_pred HHHHhHHHHHHHHHHHHHHHHHcCCCccCcCeEEE-EcCCCCcHHHHHHHHHHcC
Q psy6736 287 FEELNADLFRGTMEPVEKSLRDAKMDKAQIHDIVL-VGGSTRIPKVQKLLQDFFN 340 (1023)
Q Consensus 287 ~e~~~~~~~~~i~~~i~~~l~~~~~~~~~i~~V~L-vGG~sr~p~v~~~l~~~f~ 340 (1023)
++...++...-+...++++|++++++++|||.|++ +.+....|.+..+|.+.++
T Consensus 165 ~~~~~~ea~~l~~~A~~~aL~kaGi~p~dID~LVv~cS~~~~~PSlaa~V~~~LG 219 (502)
T PLN02377 165 MAAAREEAEQVMFGALDNLFANTNVNPKDIGILVVNCSLFNPTPSLSAMIVNKYK 219 (502)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHcCCCHHHCCEEEEECCCCCCCCcHHHHHHHHhC
Confidence 44444444555677888999999999999999877 4444468999999999994
No 252
>PF03646 FlaG: FlaG protein; InterPro: IPR005186 Although these proteins are known to be important for flagellar their exact function is unknown.; PDB: 2HC5_A.
Probab=29.74 E-value=79 Score=28.88 Aligned_cols=45 Identities=20% Similarity=0.429 Sum_probs=32.4
Q ss_pred eEEEEEEECCC-ccEEEEEEEcccCceeeEEeccccccccccccccccccCcccceEEeeCCCCCCHHHHHHHHHHHHHH
Q psy6736 915 QIEVTFDIDAN-GILNVTAIEKSTGKENKITITNDRGRRYLNVTAIEKSTGKENKITITNDRGRLSKEDIERMVNDAEKY 993 (1023)
Q Consensus 915 ~i~v~f~id~~-gil~V~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ls~eei~~~~~~~~~~ 993 (1023)
...+.|.+|.+ |.+.|.++|..||+... .++.|++-++.+++.++
T Consensus 54 ~~~l~F~vde~~~~~vVkViD~~T~eVIR----------------------------------qIP~Ee~l~l~~~l~e~ 99 (107)
T PF03646_consen 54 NTSLRFSVDEESGRVVVKVIDKETGEVIR----------------------------------QIPPEELLDLAKRLREL 99 (107)
T ss_dssp S--EEEEEEEETTEEEEEEEETTT-SEEE----------------------------------EE-HHHHHHHHHHHHHH
T ss_pred CCceEEEEecCCCcEEEEEEECCCCcEEE----------------------------------eCCcHHHHHHHHHHHHH
Confidence 35789999885 88999999999998643 26788888887777664
No 253
>PLN02362 hexokinase
Probab=29.65 E-value=3.6e+02 Score=32.24 Aligned_cols=26 Identities=27% Similarity=0.362 Sum_probs=22.7
Q ss_pred CCcceEEEEEeCCceEEEEEEEEeCC
Q psy6736 632 SGERNVLIFDLGGGTFDVSILTIEDG 657 (1023)
Q Consensus 632 ~~~~~vlV~D~GggT~dvsi~~~~~~ 657 (1023)
.+...+|.+|+||.+|-|..+++.++
T Consensus 92 ~E~G~fLAlDlGGTNfRV~~V~L~g~ 117 (509)
T PLN02362 92 SEIGTYYALDLGGTNFRVLRVQLGGQ 117 (509)
T ss_pred CcceeEEEEecCCceEEEEEEEecCC
Confidence 45677999999999999999999764
No 254
>PRK12440 acetate kinase; Reviewed
Probab=29.24 E-value=7.3e+02 Score=28.56 Aligned_cols=43 Identities=9% Similarity=0.144 Sum_probs=29.7
Q ss_pred HHHHHHHHHHHHHHHHcCCCccCcCeEEEEcCCCCcHH-HHHHHHHHc
Q psy6736 293 DLFRGTMEPVEKSLRDAKMDKAQIHDIVLVGGSTRIPK-VQKLLQDFF 339 (1023)
Q Consensus 293 ~~~~~i~~~i~~~l~~~~~~~~~i~~V~LvGG~sr~p~-v~~~l~~~f 339 (1023)
-++.++.+.|-...... ..+|.|+++||-+.... +|+.|.+.+
T Consensus 302 ~f~yri~k~Ig~~~a~l----~gvDaiVFTgGIGen~~~vr~~i~~~l 345 (397)
T PRK12440 302 VFTYRVAKYIASYLAAL----DSLDGIIFTGGIGENSLPIRREILKNL 345 (397)
T ss_pred HHHHHHHHHHHHHHHHh----CCCCEEEECCccccCcHHHHHHHHhhh
Confidence 34445544444443332 35899999999998777 999998876
No 255
>PLN02902 pantothenate kinase
Probab=29.13 E-value=1.4e+02 Score=37.54 Aligned_cols=49 Identities=14% Similarity=0.044 Sum_probs=30.7
Q ss_pred ccccceEEEecCccCc-----HHHHHHHHHhh--cCcccCCCCCCccceecchHHHH
Q psy6736 770 KAQIHDIVLVGGSTRI-----PKVQKLLQDFF--NGKELNKSINPDEAVAYGAAVQA 819 (1023)
Q Consensus 770 ~~~i~~V~LvGG~sri-----p~v~~~l~~~f--~~~~~~~~~~p~~aVa~GAa~~a 819 (1023)
..+++.|+++|..-|- ..+...+. ++ +..+.....+--..-|.||.+..
T Consensus 344 ~~~ikrIvF~G~fIr~h~~tm~~ls~Ai~-fwSkg~~~a~FlrHeGylGAlGafl~~ 399 (876)
T PLN02902 344 RFGLKRIFFGGFFIRGHAYTMDTISFAVH-FWSKGEAQAMFLRHEGFLGALGAFMSY 399 (876)
T ss_pred HcCCCEEEEecceecCCcchHHHHHHHHH-HhcCCceEEEEecccchhHHHHHHhcC
Confidence 3568899999998664 33444444 23 22344455566677888887655
No 256
>KOG1385|consensus
Probab=28.94 E-value=55 Score=37.06 Aligned_cols=88 Identities=20% Similarity=0.207 Sum_probs=47.4
Q ss_pred hHHHHHHHHHhCCc---CCcceEecCCCC---CHHHHHHHHHHHHHc----C-C----ceeeeec---chHHH--HHHhc
Q psy6736 101 ILKKKTSEDILRKV---DGQNEGLIPAYF---NISSVKSTKDSGTIA----G-L----NVLRIIN---EPTAA--AIAYG 160 (1023)
Q Consensus 101 ~~l~~~a~~~~~~~---~~~~vitVPa~~---~~~qr~~l~~Aa~~A----G-l----~~~~li~---Ep~AA--al~y~ 160 (1023)
+-|.+.|+++.... -+.+++---|.+ ....-+.+.+|.+.. + + +.+.+++ |..=| .++|.
T Consensus 124 ~~LLd~A~~~vP~~~~~kTPi~lkATAGLRlL~~~ka~~IL~aVre~l~~~s~f~v~~d~VsIm~GtdEGv~aWiTiN~L 203 (453)
T KOG1385|consen 124 RPLLDVAEAFVPREHWKKTPIVLKATAGLRLLPGSKADNILQAVRELLKNDSPFPVVEDAVSIMDGTDEGVYAWITINYL 203 (453)
T ss_pred HHHHHHHHhhCCHhHhccCceEEEeecccccCChhHHHHHHHHHHHHHhccCCccccCCceeeccCcccceeeeeehhhh
Confidence 78999999886432 233444444444 222223344443322 1 1 2234443 44433 24444
Q ss_pred cccccCccccccCCCCCcEEEEEEeCCceEEEEEEE
Q psy6736 161 LDKKVGSTAVEYNGSGERNVLIFDLGGGTFDVSILT 196 (1023)
Q Consensus 161 ~~~~~~~~~~~~~~~~~~~vlV~D~GggT~dvsv~~ 196 (1023)
...-.. ....++.|+|+|||+|.++..-
T Consensus 204 lg~L~~--------~~~~tvgv~DLGGGSTQi~f~p 231 (453)
T KOG1385|consen 204 LGTLGA--------PGHRTVGVVDLGGGSTQITFLP 231 (453)
T ss_pred hcccCC--------CCCCceEEEEcCCceEEEEEec
Confidence 333211 1357899999999999999765
No 257
>PRK07058 acetate kinase; Provisional
Probab=28.48 E-value=4.6e+02 Score=30.16 Aligned_cols=42 Identities=7% Similarity=0.157 Sum_probs=30.1
Q ss_pred HHHHHHHHHHHHHHHcCCCccccceEEEecCcc-CcHHHHHHHHHhh
Q psy6736 751 LFRGTMEPVEKSLRDAKMDKAQIHDIVLVGGST-RIPKVQKLLQDFF 796 (1023)
Q Consensus 751 ~~~~~~~~i~~~l~~~~~~~~~i~~V~LvGG~s-rip~v~~~l~~~f 796 (1023)
...++.+.|-...... ..+|.|+++||-. +.+.||+.|.+.+
T Consensus 301 f~yri~k~IGa~~a~L----g~vDaiVfTGGIgEns~~vr~~i~~~l 343 (396)
T PRK07058 301 FALRIAGEIARLAATL----GGLDAVVFTAGIGEHQPAIRAAVCERL 343 (396)
T ss_pred HHHHHHHHHHHHHHHh----CCCCEEEECCccccCcHHHHHHHHhhh
Confidence 3444444444433322 3589999999999 9999999999876
No 258
>COG2192 Predicted carbamoyl transferase, NodU family [Posttranslational modification, protein turnover, chaperones]
Probab=28.30 E-value=1.1e+03 Score=28.27 Aligned_cols=82 Identities=21% Similarity=0.197 Sum_probs=54.5
Q ss_pred EecHHHHHHHhHHHHHHHHHHHHHHHHHcCCCccCcCeEEEEcCCCCcHHHH-HHHHHHcCCcccc-ccCCCchhHHhHH
Q psy6736 281 SITRARFEELNADLFRGTMEPVEKSLRDAKMDKAQIHDIVLVGGSTRIPKVQ-KLLQDFFNGKELN-KSINPDEAVAYGA 358 (1023)
Q Consensus 281 ~itr~~~e~~~~~~~~~i~~~i~~~l~~~~~~~~~i~~V~LvGG~sr~p~v~-~~l~~~f~~~~i~-~~~~pd~aVa~GA 358 (1023)
+..-.++...++..+++++..+-+-+.+... .+.+.+.||.+..-..- +.|.+-+ ...+. .+--.|.-.|.||
T Consensus 255 ~~~~~diAasaQ~~lE~l~l~~~~~~~~~~g----~~~L~~AGGVAlNv~~N~~~l~~~~-f~dlfV~Pa~gD~G~AvGA 329 (555)
T COG2192 255 TERAADIAASAQAYLEELVLEMLRYLREETG----EDNLALAGGVALNVKANGKLLRRGL-FEDLFVQPAMGDAGLAVGA 329 (555)
T ss_pred cccHHHHHHHHHHHHHHHHHHHHHHHHHHhC----ccceEEccceeeeeeehHhHhhccc-CceeEecCCCCCcchHHHH
Confidence 3344566666777777777666666654432 47799999998876666 5565555 33443 3334578899999
Q ss_pred HHHHHHHhC
Q psy6736 359 AVQAAILHG 367 (1023)
Q Consensus 359 a~~a~~l~~ 367 (1023)
|+++....+
T Consensus 330 Al~~~~~~~ 338 (555)
T COG2192 330 ALAVKRELG 338 (555)
T ss_pred HHHHHHHhc
Confidence 999876543
No 259
>COG1548 Predicted transcriptional regulator/sugar kinase [Transcription / Carbohydrate transport and metabolism]
Probab=27.96 E-value=54 Score=34.64 Aligned_cols=73 Identities=16% Similarity=0.041 Sum_probs=39.7
Q ss_pred hHHHHHHHHHhCCcCCcceEecCCCCCHHHHHHHHHHHHHcCCceeeeecchHHHHHHhccccccCccccccCCCCCcEE
Q psy6736 101 ILKKKTSEDILRKVDGQNEGLIPAYFNISSVKSTKDSGTIAGLNVLRIINEPTAAAIAYGLDKKVGSTAVEYNGSGERNV 180 (1023)
Q Consensus 101 ~~l~~~a~~~~~~~~~~~vitVPa~~~~~qr~~l~~Aa~~AGl~~~~li~Ep~AAal~y~~~~~~~~~~~~~~~~~~~~v 180 (1023)
+.+++..+..++.++ .++++-..|... ++.++-- -.|||-+.+..+-.. ...+..+
T Consensus 77 e~Ii~~v~~Af~~pv--~~v~~~G~~~ss--Ea~~~~~-------------~vAAaNW~Ata~~~~-------e~~~dsc 132 (330)
T COG1548 77 EDIIDTVEKAFNCPV--YVVDVNGNFLSS--EALKNPR-------------EVAAANWVATARFLA-------EEIKDSC 132 (330)
T ss_pred HHHHHHHHHhcCCce--EEEeccCcCcCh--hHhcCHH-------------HHHHhhhHHHHHHHH-------HhcCCce
Confidence 566666666666665 677777777553 2222111 122322222111100 0135668
Q ss_pred EEEEeCCceEEEEEEEE
Q psy6736 181 LIFDLGGGTFDVSILTI 197 (1023)
Q Consensus 181 lV~D~GggT~dvsv~~~ 197 (1023)
+++|+|..|+|+--+.-
T Consensus 133 i~VD~GSTTtDIIPi~~ 149 (330)
T COG1548 133 ILVDMGSTTTDIIPIKD 149 (330)
T ss_pred EEEecCCcccceEeecc
Confidence 99999999999876643
No 260
>PRK13328 pantothenate kinase; Reviewed
Probab=27.30 E-value=1.2e+02 Score=32.75 Aligned_cols=70 Identities=19% Similarity=0.216 Sum_probs=38.3
Q ss_pred HHHHHHHhHHHHHHHHHHHHHHHHHcCCCccCcCeEEEEcCCCCcHHHHHHHHHHcCCccccccCCCchhHHhHHHHHHH
Q psy6736 284 RARFEELNADLFRGTMEPVEKSLRDAKMDKAQIHDIVLVGGSTRIPKVQKLLQDFFNGKELNKSINPDEAVAYGAAVQAA 363 (1023)
Q Consensus 284 r~~~e~~~~~~~~~i~~~i~~~l~~~~~~~~~i~~V~LvGG~sr~p~v~~~l~~~f~~~~i~~~~~pd~aVa~GAa~~a~ 363 (1023)
++.-+.+-..++......|+..+++..-...+--.|+++||.+.. |...+ ... ...+|+ -|-.|..+++.
T Consensus 183 ~~T~~ai~sG~~~~~~~~i~~~i~~~~~~~~~~~~vi~TGGda~~------l~~~l-~~~--~~~~p~-LvL~GL~~i~~ 252 (255)
T PRK13328 183 DDTPDAISAGCLAAQAGLIERAWRDLAARWQAPVRLVLSGGAADA------VAPAL-TVP--HTRHDN-LVLLGLALIAA 252 (255)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCEEEEECCCHHH------HHhhC-CCC--CEECCC-cHHHHHHHHHh
Confidence 445555555666666666666655432222112469999999653 33333 111 233555 67888876653
No 261
>PLN02596 hexokinase-like
Probab=27.24 E-value=2.9e+02 Score=32.85 Aligned_cols=27 Identities=15% Similarity=0.156 Sum_probs=23.4
Q ss_pred CCCcceEEEEEeCCceEEEEEEEEeCC
Q psy6736 631 GSGERNVLIFDLGGGTFDVSILTIEDG 657 (1023)
Q Consensus 631 ~~~~~~vlV~D~GggT~dvsi~~~~~~ 657 (1023)
..+...+|.+|+||.+|-|..+++.++
T Consensus 92 G~E~G~yLAlDlGGTNfRV~~V~L~g~ 118 (490)
T PLN02596 92 GDEKGLYYGLNLRGSNFLLLRARLGGK 118 (490)
T ss_pred CCcceEEEEEeeCCceEEEEEEEEcCC
Confidence 355678999999999999999999764
No 262
>PTZ00297 pantothenate kinase; Provisional
Probab=26.90 E-value=4.5e+02 Score=35.92 Aligned_cols=50 Identities=14% Similarity=0.108 Sum_probs=36.6
Q ss_pred ccccceEEEecC-ccCcHHHHHHHHHhh-----cCcccCCCCCCccceecchHHHH
Q psy6736 770 KAQIHDIVLVGG-STRIPKVQKLLQDFF-----NGKELNKSINPDEAVAYGAAVQA 819 (1023)
Q Consensus 770 ~~~i~~V~LvGG-~srip~v~~~l~~~f-----~~~~~~~~~~p~~aVa~GAa~~a 819 (1023)
..+++.|+++|+ -...|...+.|...+ |+.+.....+-...-|+||++..
T Consensus 1389 ~~~~~~i~f~G~~i~~~~~~~~~l~~a~~~ws~g~~~a~fl~hegy~ga~Ga~~~~ 1444 (1452)
T PTZ00297 1389 VQGVPNIFFAGGFVRDNPIIWSHISSTMKYWSKGECHAHFLEHDGYLGALGCATLD 1444 (1452)
T ss_pred HcCCCEEEEecchhcCCHHHHHHHHHHHHHHcCCCeeEEEecCccccHHhhhhhcC
Confidence 467899999999 455899988888654 33455555567788889988654
No 263
>PTZ00297 pantothenate kinase; Provisional
Probab=25.88 E-value=4.2e+02 Score=36.24 Aligned_cols=73 Identities=12% Similarity=0.054 Sum_probs=46.0
Q ss_pred HHHhHHHHHHHHHHHHHHHHHcCCCccCcCeEEEEcC-CCCcHHHHHHHHHHc-----CCccccccCCCchhHHhHHHHH
Q psy6736 288 EELNADLFRGTMEPVEKSLRDAKMDKAQIHDIVLVGG-STRIPKVQKLLQDFF-----NGKELNKSINPDEAVAYGAAVQ 361 (1023)
Q Consensus 288 e~~~~~~~~~i~~~i~~~l~~~~~~~~~i~~V~LvGG-~sr~p~v~~~l~~~f-----~~~~i~~~~~pd~aVa~GAa~~ 361 (1023)
+++++.++.-|..-|-+.--- .....+++.|+++|+ -...|...+.|.... |+.+....-+-...-|.||++.
T Consensus 1365 ~Di~~sll~~is~nIgqia~l-~a~~~~~~~i~f~G~~i~~~~~~~~~l~~a~~~ws~g~~~a~fl~hegy~ga~Ga~~~ 1443 (1452)
T PTZ00297 1365 IDIVRSLLNMISSNVTQLAYL-HSRVQGVPNIFFAGGFVRDNPIIWSHISSTMKYWSKGECHAHFLEHDGYLGALGCATL 1443 (1452)
T ss_pred HHHHHHHHHHHHHHHHHHHHH-HHHHcCCCEEEEecchhcCCHHHHHHHHHHHHHHcCCCeeEEEecCccccHHhhhhhc
Confidence 345555555555444332111 122456899999999 555898888887653 3445555556778889999865
No 264
>KOG2708|consensus
Probab=25.80 E-value=7.8e+02 Score=25.73 Aligned_cols=66 Identities=12% Similarity=0.239 Sum_probs=45.4
Q ss_pred HHHHHHHHHHHHHHHHHcCCCccccceEEEecCccCcHHHHHHHHHhhcCcc-cCCCCCCccceecchHHHH
Q psy6736 749 ADLFRGTMEPVEKSLRDAKMDKAQIHDIVLVGGSTRIPKVQKLLQDFFNGKE-LNKSINPDEAVAYGAAVQA 819 (1023)
Q Consensus 749 ~~~~~~~~~~i~~~l~~~~~~~~~i~~V~LvGG~srip~v~~~l~~~f~~~~-~~~~~~p~~aVa~GAa~~a 819 (1023)
+-+|.-+.+..++++...+. +.|++|||-...-.+|++......+.. .....|-..|+--|+-+--
T Consensus 236 EtvFamLVEiTERAMAh~~s-----~evLIVGGVGCN~RLQeMM~~Mc~eRgg~~faTDeRfCIDNG~MIA~ 302 (336)
T KOG2708|consen 236 ETVFAMLVEITERAMAHCGS-----KEVLIVGGVGCNERLQEMMAIMCSERGGKLFATDERFCIDNGVMIAQ 302 (336)
T ss_pred HHHHHHHHHHHHHHHhhcCC-----CcEEEEecccccHHHHHHHHHHHHhcCCceEecccceeeeCchHHHH
Confidence 34455566777777776653 579999999999999999988763321 2234455667777876543
No 265
>PF02801 Ketoacyl-synt_C: Beta-ketoacyl synthase, C-terminal domain; InterPro: IPR014031 Beta-ketoacyl-ACP synthase 2.3.1.41 from EC (KAS) [] is the enzyme that catalyzes the condensation of malonyl-ACP with the growing fatty acid chain. It is found as a component of a number of enzymatic systems, including fatty acid synthetase (FAS), which catalyzes the formation of long-chain fatty acids from acetyl-CoA, malonyl-CoA and NADPH; the multi-functional 6-methysalicylic acid synthase (MSAS) from Penicillium patulum [], which is involved in the biosynthesis of a polyketide antibiotic; polyketide antibiotic synthase enzyme systems; Emericella nidulans multifunctional protein Wa, which is involved in the biosynthesis of conidial green pigment; Rhizobium nodulation protein nodE, which probably acts as a beta-ketoacyl synthase in the synthesis of the nodulation Nod factor fatty acyl chain; and yeast mitochondrial protein CEM1. The condensation reaction is a two step process, first the acyl component of an activated acyl primer is transferred to a cysteine residue of the enzyme and is then condensed with an activated malonyl donor with the concomitant release of carbon dioxide. This entry represents the C-terminal domain of beta-ketoacyl-ACP synthases. The active site is contained in a cleft betweeen N- and C-terminal domains, with residues from both domains contributing to substrate binding and catalysis [].; PDB: 2UV8_B 3HMJ_A 2VKZ_C 4EWG_A 1TQY_H 1E5M_A 1J3N_B 2VZ8_A 2VZ9_B 3O04_A ....
Probab=25.39 E-value=1e+02 Score=28.69 Aligned_cols=47 Identities=17% Similarity=0.228 Sum_probs=32.5
Q ss_pred HHHHHHHHHHHHHHcCCCccccceEEEecCccCc--HHHHHHHHHhhcC
Q psy6736 752 FRGTMEPVEKSLRDAKMDKAQIHDIVLVGGSTRI--PKVQKLLQDFFNG 798 (1023)
Q Consensus 752 ~~~~~~~i~~~l~~~~~~~~~i~~V~LvGG~sri--p~v~~~l~~~f~~ 798 (1023)
-......++++|+++++++++|+.|..-|-++.. +.=.+.|.+.|+.
T Consensus 24 ~~~~~~~i~~al~~agi~~~~I~~i~~hg~Gt~~~D~~E~~ai~~~~~~ 72 (119)
T PF02801_consen 24 GAALARAIRRALADAGISPEDIDYIEAHGTGTPLGDAAEAEAIARVFGD 72 (119)
T ss_dssp HHHHHHHHHHHHHHHTS-GGGEEEEE----SSHHHHHHHHHHHHHHHGG
T ss_pred HHHHHHHHHHHHhhhccccccceeeeeeccccccchhhhhhhhhhhhcc
Confidence 3445677999999999999999999999977775 4444577888854
No 266
>PRK09604 UGMP family protein; Validated
Probab=24.80 E-value=1e+02 Score=34.59 Aligned_cols=59 Identities=17% Similarity=0.230 Sum_probs=39.2
Q ss_pred HHHHHHHHHHcCCCccccceEEEecCccCcHHHHHHHHHhhcC--cccCCCC---CCccceecchHHHH
Q psy6736 756 MEPVEKSLRDAKMDKAQIHDIVLVGGSTRIPKVQKLLQDFFNG--KELNKSI---NPDEAVAYGAAVQA 819 (1023)
Q Consensus 756 ~~~i~~~l~~~~~~~~~i~~V~LvGG~srip~v~~~l~~~f~~--~~~~~~~---~p~~aVa~GAa~~a 819 (1023)
.+.++++++.. .++.|+|.||.....++++.|.+.+.. ..+..+. --|.++++|+|=+-
T Consensus 243 ~~~~~~~~~~~-----~~~~lvlsGGVa~N~~L~~~l~~~~~~~g~~v~~~~~~p~~D~gisIg~ag~~ 306 (332)
T PRK09604 243 VIKTKRALKQT-----GVKTLVVAGGVAANSGLRERLAELAKKRGIEVFIPPLKLCTDNAAMIAAAGYE 306 (332)
T ss_pred HHHHHHHHHHh-----CCCeEEEcChHHHHHHHHHHHHHHHHHCCCEEECCCCCCCcHHHHHHHHHHHH
Confidence 34444444432 467899999999999999999998732 2222222 34778888887443
No 267
>cd02639 R3H_RRM R3H domain of mainly fungal proteins which are associated with a RNA recognition motif (RRM) domain. Present in this group is the RNA-binding post-transcriptional regulator Cip2 (Csx1-interacting protein 2) involved in counteracting Csx1 function. Csx1 plays a central role in controlling gene expression during oxidative stress. The name of the R3H domain comes from the characteristic spacing of the most conserved arginine and histidine residues. The function of the domain is predicted to bind ssDNA or ssRNA in a sequence-specific manner.
Probab=24.18 E-value=1.3e+02 Score=24.34 Aligned_cols=30 Identities=17% Similarity=0.192 Sum_probs=26.7
Q ss_pred cceEecCCCCCHHHHHHHHHHHHHcCCcee
Q psy6736 117 QNEGLIPAYFNISSVKSTKDSGTIAGLNVL 146 (1023)
Q Consensus 117 ~~vitVPa~~~~~qr~~l~~Aa~~AGl~~~ 146 (1023)
.-.++.|+.++..||+.+...|...||...
T Consensus 17 ~~eL~Fp~~ls~~eRriih~la~~lGL~~~ 46 (60)
T cd02639 17 RDELAFPSSLSPAERRIVHLLASRLGLNHV 46 (60)
T ss_pred ceEEEcCCCCCHHHHHHHHHHHHHcCCceE
Confidence 557788999999999999999999998763
No 268
>PLN03173 chalcone synthase; Provisional
Probab=24.14 E-value=2.5e+02 Score=32.38 Aligned_cols=48 Identities=17% Similarity=0.269 Sum_probs=38.9
Q ss_pred HHHHHHHHHHHHHHHHcCCCccCcCeEEEEcCCC-CcHHHHHHHHHHcC
Q psy6736 293 DLFRGTMEPVEKSLRDAKMDKAQIHDIVLVGGST-RIPKVQKLLQDFFN 340 (1023)
Q Consensus 293 ~~~~~i~~~i~~~l~~~~~~~~~i~~V~LvGG~s-r~p~v~~~l~~~f~ 340 (1023)
.-.+-..+.++++|+++++.+++||.|+++..+. ..|.+.-.|.+.+|
T Consensus 101 ~a~~La~~Aa~~AL~~ag~~~~dId~li~~t~t~~~~P~~a~~l~~~LG 149 (391)
T PLN03173 101 EVPKLGKEAAAKAIKEWGQPKSKITHLVFCTTSGVDMPGADYQLTKLLG 149 (391)
T ss_pred HHHHHHHHHHHHHHHHcCCCHHHCCEEEEEccCCCcccHHHHHHHHHhC
Confidence 3444556778899999999999999988776554 58999999999984
No 269
>PRK05082 N-acetylmannosamine kinase; Provisional
Probab=23.74 E-value=2.6e+02 Score=30.56 Aligned_cols=48 Identities=23% Similarity=0.187 Sum_probs=31.7
Q ss_pred CcCeEEEEcCCCCcHHHHHHHHHHcCC------ccccccCCCchhHHhHHHHHH
Q psy6736 315 QIHDIVLVGGSTRIPKVQKLLQDFFNG------KELNKSINPDEAVAYGAAVQA 362 (1023)
Q Consensus 315 ~i~~V~LvGG~sr~p~v~~~l~~~f~~------~~i~~~~~pd~aVa~GAa~~a 362 (1023)
+++.|+|-|+.+..+.+.+.+++.+.. .++......+.+.+.|||.++
T Consensus 233 dpe~IvlgG~~~~~~~~~~~i~~~l~~~~~~~~~~i~~s~~~~~~~~~GAa~~~ 286 (291)
T PRK05082 233 DCQCVVLGGSVGLAEGYLELVQAYLAQEPAIYHVPLLAAHYRHDAGLLGAALWA 286 (291)
T ss_pred CCCEEEEcCccccHHHHHHHHHHHHHhcccccCCeEEECccCCchhhhhHHHHh
Confidence 458899988887766666666665522 123333345678899999876
No 270
>KOG1385|consensus
Probab=23.67 E-value=62 Score=36.71 Aligned_cols=20 Identities=40% Similarity=0.770 Sum_probs=17.5
Q ss_pred cceEEEEEeCCceEEEEEEE
Q psy6736 634 ERNVLIFDLGGGTFDVSILT 653 (1023)
Q Consensus 634 ~~~vlV~D~GggT~dvsi~~ 653 (1023)
.+++-|+|+|||++.++..-
T Consensus 212 ~~tvgv~DLGGGSTQi~f~p 231 (453)
T KOG1385|consen 212 HRTVGVVDLGGGSTQITFLP 231 (453)
T ss_pred CCceEEEEcCCceEEEEEec
Confidence 57799999999999998764
No 271
>PLN03170 chalcone synthase; Provisional
Probab=23.47 E-value=2.3e+02 Score=32.82 Aligned_cols=51 Identities=14% Similarity=0.196 Sum_probs=40.6
Q ss_pred hHHHHHHHHHHHHHHHHHcCCCccCcCeEEEEcCCC-CcHHHHHHHHHHcCC
Q psy6736 291 NADLFRGTMEPVEKSLRDAKMDKAQIHDIVLVGGST-RIPKVQKLLQDFFNG 341 (1023)
Q Consensus 291 ~~~~~~~i~~~i~~~l~~~~~~~~~i~~V~LvGG~s-r~p~v~~~l~~~f~~ 341 (1023)
.+...+-..+..+++|+++++.++|||.|+++-.+. .+|.+.-.|.+.++-
T Consensus 103 ~~~a~~La~~Aa~~AL~~ag~~~~dId~lI~~T~Tg~~~Ps~a~~l~~~LGl 154 (401)
T PLN03170 103 VVEVPKLGKAAAQKAIKEWGQPKSKITHLVFCTTSGVDMPGADYQLTKMLGL 154 (401)
T ss_pred HHHHHHHHHHHHHHHHHHcCCCHHHCCEEEEEccCCCCCChHHHHHHHHhCc
Confidence 334445556788999999999999999988776544 699999999999843
No 272
>TIGR03723 bact_gcp putative glycoprotease GCP. This model represents bacterial members of a protein family that is widely distributed. In a few pathogenic species, the protein is exported in a way that may represent an exceptional secondary function. This model plus companion (archaeal) model TIGR03722 together span the prokaryotic member sequences of TIGR00329, a protein family that appears universal in life, and whose broad function is unknown. A member of TIGR03722 has been characterized as a DNA-binding protein with apurinic endopeptidase activity. In contrast, the rare characterized members of the present family show O-sialoglycoprotein endopeptidase (EC. 3.4.24.57) activity after export. These include glycoprotease (gcp) from Pasteurella haemolytica A1 and a cohemolysin from Riemerella anatipestifer (GB|AAG39646.1). The member from Staphylococcus aureus is essential and is related to cell wall dynamics and the modulation of autolysis, but members are also found in the Mycoplasmas
Probab=23.15 E-value=1.3e+02 Score=33.65 Aligned_cols=56 Identities=20% Similarity=0.382 Sum_probs=36.7
Q ss_pred HHHHHHHHHHcCCCccccceEEEecCccCcHHHHHHHHHhhcCc--ccCCC-C--CCccceecchH
Q psy6736 756 MEPVEKSLRDAKMDKAQIHDIVLVGGSTRIPKVQKLLQDFFNGK--ELNKS-I--NPDEAVAYGAA 816 (1023)
Q Consensus 756 ~~~i~~~l~~~~~~~~~i~~V~LvGG~srip~v~~~l~~~f~~~--~~~~~-~--~p~~aVa~GAa 816 (1023)
.+.+.++++.. .++.|+|.||.....++++.|.+..... .+..+ . --|.++++|+|
T Consensus 248 ~~~~~~~~~~~-----~~~~v~lsGGVa~N~~l~~~l~~~~~~~~~~v~~~~~~p~~D~Gi~Ig~a 308 (314)
T TIGR03723 248 VEKTKRALKKT-----GLKTLVVAGGVAANSRLRERLEELAEKAGLEVFIPPLELCTDNAAMIAAA 308 (314)
T ss_pred HHHHHHHHHHh-----CCCeEEEeccHHHHHHHHHHHHHHHHHCCCEEECCCCCCCChHHHHHHHH
Confidence 34445555433 3578999999999999999999887321 22211 1 33667777765
No 273
>PLN02377 3-ketoacyl-CoA synthase
Probab=22.89 E-value=1.7e+02 Score=34.97 Aligned_cols=51 Identities=6% Similarity=0.141 Sum_probs=39.8
Q ss_pred HHHHHHHHHHHHHHHHHHcCCCccccceEEE-ecCccCcHHHHHHHHHhhcC
Q psy6736 748 NADLFRGTMEPVEKSLRDAKMDKAQIHDIVL-VGGSTRIPKVQKLLQDFFNG 798 (1023)
Q Consensus 748 ~~~~~~~~~~~i~~~l~~~~~~~~~i~~V~L-vGG~srip~v~~~l~~~f~~ 798 (1023)
.+...+=+...++++|++++++++|||.|+. +.+....|.+--+|.+.+|-
T Consensus 169 ~~ea~~l~~~A~~~aL~kaGi~p~dID~LVv~cS~~~~~PSlaa~V~~~LGl 220 (502)
T PLN02377 169 REEAEQVMFGALDNLFANTNVNPKDIGILVVNCSLFNPTPSLSAMIVNKYKL 220 (502)
T ss_pred HHHHHHHHHHHHHHHHHHcCCCHHHCCEEEEECCCCCCCCcHHHHHHHHhCC
Confidence 3334444567888999999999999999877 44555689999999999953
No 274
>COG4819 EutA Ethanolamine utilization protein, possible chaperonin protecting lyase from inhibition [Amino acid transport and metabolism]
Probab=22.62 E-value=51 Score=36.02 Aligned_cols=87 Identities=21% Similarity=0.124 Sum_probs=48.3
Q ss_pred ceEecCCCCCHHHHHHHHHHHHHcCCceeeee---cchHHHHHHhccccccCccccccCCCCCcEEEEEEeCCceEEEEE
Q psy6736 118 NEGLIPAYFNISSVKSTKDSGTIAGLNVLRII---NEPTAAAIAYGLDKKVGSTAVEYNGSGERNVLIFDLGGGTFDVSI 194 (1023)
Q Consensus 118 ~vitVPa~~~~~qr~~l~~Aa~~AGl~~~~li---~Ep~AAal~y~~~~~~~~~~~~~~~~~~~~vlV~D~GggT~dvsv 194 (1023)
++||=-.--...+|.++..-...||==++.-. -|..-|.-..+.. .+.......++=+|+||||+..|+
T Consensus 90 vIITGEtArk~NA~~vl~alSg~aGDFVVAtAGPdLESiIAGkGaGA~--------t~Seqr~t~v~NlDIGGGTtN~sl 161 (473)
T COG4819 90 VIITGETARKRNARPVLMALSGSAGDFVVATAGPDLESIIAGKGAGAQ--------TLSEQRLTRVLNLDIGGGTTNYSL 161 (473)
T ss_pred EEEeccccccccchHHHHHhhhcccceEEEecCCCHHHHhccCCcccc--------chhhhhceEEEEEeccCCccceee
Confidence 56666566667777777666666763222211 1222222211111 111224567899999999999999
Q ss_pred EEEeCCEEEEEEecCCCCccHHH
Q psy6736 195 LTIEDGIFEVKSTAGDTHLGGED 217 (1023)
Q Consensus 195 ~~~~~~~~~v~~~~~~~~lGG~~ 217 (1023)
+..++ +..+ .+..+||+-
T Consensus 162 FD~Gk----v~dT-aCLdiGGRL 179 (473)
T COG4819 162 FDAGK----VSDT-ACLDIGGRL 179 (473)
T ss_pred ecccc----cccc-eeeecCcEE
Confidence 86532 2222 225677764
No 275
>PLN03172 chalcone synthase family protein; Provisional
Probab=22.57 E-value=2.8e+02 Score=32.02 Aligned_cols=51 Identities=16% Similarity=0.251 Sum_probs=40.8
Q ss_pred HhHHHHHHHHHHHHHHHHHcCCCccCcCeEEEEcCCC-CcHHHHHHHHHHcC
Q psy6736 290 LNADLFRGTMEPVEKSLRDAKMDKAQIHDIVLVGGST-RIPKVQKLLQDFFN 340 (1023)
Q Consensus 290 ~~~~~~~~i~~~i~~~l~~~~~~~~~i~~V~LvGG~s-r~p~v~~~l~~~f~ 340 (1023)
..+...+-..+.++++|+++++.+++||.|+++..+. .+|.+.-.|.+.++
T Consensus 98 ~~~~a~~La~~Aa~~aL~~ag~~~~dId~ii~~t~t~~~~P~~a~~l~~~LG 149 (393)
T PLN03172 98 VVVEVPKLGKEAAAKAIKEWGQPKSKITHLVFCTTSGVDMPGADYQLTKLLG 149 (393)
T ss_pred HHHHHHHHHHHHHHHHHHHcCCCHHHCCEEEEEccCCCcCchHHHHHHHHhC
Confidence 3344445556778899999999999999988776655 69999999999984
No 276
>PF08392 FAE1_CUT1_RppA: FAE1/Type III polyketide synthase-like protein; InterPro: IPR013601 This domain is found in proteins that are described as 3-ketoacyl-CoA synthases, type III polyketide synthases, fatty acid elongases and fatty acid condensing enzymes, and are found in both prokaryotic and eukaryotic (mainly plant) species. The region contains the active site residues, as well as motifs involved in substrate binding []. ; GO: 0016747 transferase activity, transferring acyl groups other than amino-acyl groups, 0006633 fatty acid biosynthetic process, 0016020 membrane
Probab=22.53 E-value=2.1e+02 Score=31.35 Aligned_cols=43 Identities=12% Similarity=0.202 Sum_probs=37.2
Q ss_pred HHHHHHHHHHHcCCCccccceEE-EecCccCcHHHHHHHHHhhc
Q psy6736 755 TMEPVEKSLRDAKMDKAQIHDIV-LVGGSTRIPKVQKLLQDFFN 797 (1023)
Q Consensus 755 ~~~~i~~~l~~~~~~~~~i~~V~-LvGG~srip~v~~~l~~~f~ 797 (1023)
+...++++|+++++++.|||.++ -+..++-.|.+-.+|.+.|+
T Consensus 87 ~f~av~~LL~ktgv~p~dIdiLVvncs~f~ptPSLsamIvnr~~ 130 (290)
T PF08392_consen 87 IFGAVDDLLAKTGVKPSDIDILVVNCSLFNPTPSLSAMIVNRYG 130 (290)
T ss_pred HHHHHHHHHHHcCCCHHHCCEEEEECcCCCcCCcHHHHHHHHhC
Confidence 45788899999999999999855 46678899999999999994
No 277
>PRK09557 fructokinase; Reviewed
Probab=22.42 E-value=1.5e+02 Score=32.77 Aligned_cols=48 Identities=23% Similarity=0.288 Sum_probs=29.8
Q ss_pred CcCeEEEEcCCCCcHHHHHHHHHHcC--------CccccccCCCchhHHhHHHHHH
Q psy6736 315 QIHDIVLVGGSTRIPKVQKLLQDFFN--------GKELNKSINPDEAVAYGAAVQA 362 (1023)
Q Consensus 315 ~i~~V~LvGG~sr~p~v~~~l~~~f~--------~~~i~~~~~pd~aVa~GAa~~a 362 (1023)
+++.|+|-||.++.+.+.+.|++.+. ..++....-.+.+.++||++..
T Consensus 244 dP~~IvlgG~~~~~~~~~~~l~~~~~~~~~~~~~~~~i~~s~~~~~a~~~GAa~~~ 299 (301)
T PRK09557 244 DPDVIVLGGGMSNVDRLYPTLPALLKQYVFGGECETPVRKALHGDSSGVRGAAWLW 299 (301)
T ss_pred CCCEEEEcCcccchHHHHHHHHHHHHHHhcccccCCeEEEcccCCchhhhhhhHhh
Confidence 45888888888777666555555441 1123333345678899998753
No 278
>COG4296 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=22.29 E-value=1.8e+02 Score=27.42 Aligned_cols=22 Identities=18% Similarity=0.468 Sum_probs=16.1
Q ss_pred HHHHHHhhCC-ccCHHHHHHHHH
Q psy6736 561 DVIKWLDANQ-LAEKEEFEHKQK 582 (1023)
Q Consensus 561 ~~~~WL~~~~-~a~~~~~~~kl~ 582 (1023)
..++||++++ .-|.+++++|..
T Consensus 90 knE~WleEDe~~iTpE~fk~Rm~ 112 (156)
T COG4296 90 KNEDWLEEDEQPITPESFKERMA 112 (156)
T ss_pred chhhhhhccCCccCHHHHHHHhh
Confidence 4578999885 578888876654
No 279
>PRK08868 flagellar protein FlaG; Provisional
Probab=21.97 E-value=2.2e+02 Score=27.58 Aligned_cols=44 Identities=23% Similarity=0.332 Sum_probs=35.0
Q ss_pred EEEEEEECCC-ccEEEEEEEcccCceeeEEeccccccccccccccccccCcccceEEeeCCCCCCHHHHHHHHHHHHHH
Q psy6736 916 IEVTFDIDAN-GILNVTAIEKSTGKENKITITNDRGRRYLNVTAIEKSTGKENKITITNDRGRLSKEDIERMVNDAEKY 993 (1023)
Q Consensus 916 i~v~f~id~~-gil~V~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ls~eei~~~~~~~~~~ 993 (1023)
..+.|++|.+ |.+-|+.+|..||+... .+..|++-++.+++.+|
T Consensus 89 ~~L~F~vdeetgr~VVkViD~~T~EVIR----------------------------------QIP~Ee~L~la~~l~e~ 133 (144)
T PRK08868 89 KGLSFRVDEESGRDVVTIYEASTGDIIR----------------------------------QIPDEEMLEVLRRLAEQ 133 (144)
T ss_pred CceEEEEecCCCCEEEEEEECCCCceee----------------------------------eCCCHHHHHHHHHHHHh
Confidence 4789999986 88899999999987542 37788888887777754
No 280
>TIGR00744 ROK_glcA_fam ROK family protein (putative glucokinase). This alignment models one branch of the ROK superfamily of proteins. The three members of the seed alignment for this model all have experimental evidence for activity as glucokinase, but the set of related proteins is crowded with paralogs of different or unknown function. Proteins scoring above the trusted_cutoff will show strong similarity to at least one known glucokinase and may be designated as putative glucokinases. However, definitive identification of glucokinases should be done only with extreme caution.
Probab=21.87 E-value=1.3e+02 Score=33.36 Aligned_cols=49 Identities=20% Similarity=0.183 Sum_probs=30.5
Q ss_pred ccceEEEecCccCc-HHHHHHHHHhhcC---------cccCCCCCCccceecchHHHHH
Q psy6736 772 QIHDIVLVGGSTRI-PKVQKLLQDFFNG---------KELNKSINPDEAVAYGAAVQAA 820 (1023)
Q Consensus 772 ~i~~V~LvGG~sri-p~v~~~l~~~f~~---------~~~~~~~~p~~aVa~GAa~~a~ 820 (1023)
+++.|+|-|+.+.. |.+.+.+++.+.. .++..+.-.+.++++|||..+.
T Consensus 251 dP~~IvlgG~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~i~~s~~~~~~~~~Gaa~~~~ 309 (318)
T TIGR00744 251 NPSAIVLGGGLSDAGDLLLDPIRKSYKRWLFGGARQVADIIAAQLGNDAGLVGAADLAR 309 (318)
T ss_pred CCCEEEECChhhhCcHHHHHHHHHHHHHHhhhcccCCcEEEEcccCCchhhHHHHHHHH
Confidence 56788888877663 5555555554411 1233344456789999998864
No 281
>PF08006 DUF1700: Protein of unknown function (DUF1700); InterPro: IPR012963 This family contains many hypothetical bacterial proteins and two putative membrane proteins (Q6GFD0 from SWISSPROT and Q6G806 from SWISSPROT).
Probab=21.74 E-value=2.2e+02 Score=28.72 Aligned_cols=57 Identities=16% Similarity=0.262 Sum_probs=34.6
Q ss_pred HHHHHHHHhhhhhhhhhccCCHHHHHHHHHhhHHHHHHHhhCC--ccCHHHHHHHHHHHHHHHHHHHH
Q psy6736 528 ESYCFNMKSTVEDEKLKDKISDAERTQILDKCNDVIKWLDANQ--LAEKEEFEHKQKELEAICNPIIT 593 (1023)
Q Consensus 528 E~~iy~~~~~l~~~~~~~~~~~~e~~~l~~~l~~~~~WL~~~~--~a~~~~~~~kl~~L~~~~~pi~~ 593 (1023)
++|+.+++..|. .++++|++++ ++.+++++++.. -.+.++.-+.+-.-++++..+..
T Consensus 4 ~efL~~L~~~L~------~lp~~e~~e~---l~~Y~e~f~d~~~~G~sEeeii~~LG~P~~iA~~i~~ 62 (181)
T PF08006_consen 4 NEFLNELEKYLK------KLPEEEREEI---LEYYEEYFDDAGEEGKSEEEIIAELGSPKEIAREILA 62 (181)
T ss_pred HHHHHHHHHHHH------cCCHHHHHHH---HHHHHHHHHHhhhCCCCHHHHHHHcCCHHHHHHHHHH
Confidence 345555555553 3566666555 556777776543 24667777777777777666654
No 282
>COG2192 Predicted carbamoyl transferase, NodU family [Posttranslational modification, protein turnover, chaperones]
Probab=21.70 E-value=1.4e+03 Score=27.36 Aligned_cols=81 Identities=20% Similarity=0.172 Sum_probs=52.8
Q ss_pred EecHHHHHHHHHHHHHHHHHHHHHHHHHcCCCccccceEEEecCccCcHHHH-HHHHHhhcCcccC-CCCCCccceecch
Q psy6736 738 SITRARFEELNADLFRGTMEPVEKSLRDAKMDKAQIHDIVLVGGSTRIPKVQ-KLLQDFFNGKELN-KSINPDEAVAYGA 815 (1023)
Q Consensus 738 ~itr~~~~~~~~~~~~~~~~~i~~~l~~~~~~~~~i~~V~LvGG~srip~v~-~~l~~~f~~~~~~-~~~~p~~aVa~GA 815 (1023)
...-.++...++..+++++..+-+-+.+... .+.+.+.||....-..- +.+.+.+ ...+. .+--.|.-.|.||
T Consensus 255 ~~~~~diAasaQ~~lE~l~l~~~~~~~~~~g----~~~L~~AGGVAlNv~~N~~~l~~~~-f~dlfV~Pa~gD~G~AvGA 329 (555)
T COG2192 255 TERAADIAASAQAYLEELVLEMLRYLREETG----EDNLALAGGVALNVKANGKLLRRGL-FEDLFVQPAMGDAGLAVGA 329 (555)
T ss_pred cccHHHHHHHHHHHHHHHHHHHHHHHHHHhC----ccceEEccceeeeeeehHhHhhccc-CceeEecCCCCCcchHHHH
Confidence 4445566666777777776666555554322 46799999998877666 5665554 22332 3334477899999
Q ss_pred HHHHHHHh
Q psy6736 816 AVQAAILH 823 (1023)
Q Consensus 816 a~~a~~l~ 823 (1023)
|+++....
T Consensus 330 Al~~~~~~ 337 (555)
T COG2192 330 ALAVKREL 337 (555)
T ss_pred HHHHHHHh
Confidence 99986544
No 283
>PLN02405 hexokinase
Probab=21.66 E-value=6.3e+02 Score=30.11 Aligned_cols=25 Identities=24% Similarity=0.371 Sum_probs=22.3
Q ss_pred CCcceEEEEEeCCceEEEEEEEEeC
Q psy6736 632 SGERNVLIFDLGGGTFDVSILTIED 656 (1023)
Q Consensus 632 ~~~~~vlV~D~GggT~dvsi~~~~~ 656 (1023)
.+...+|.+|+||.+|-|..+++.+
T Consensus 92 ~E~G~flAlDlGGTNfRV~~V~L~g 116 (497)
T PLN02405 92 DEKGLFYALDLGGTNFRVLRVLLGG 116 (497)
T ss_pred CcceeEEEEecCCceEEEEEEEEcC
Confidence 4567899999999999999999975
No 284
>TIGR03706 exo_poly_only exopolyphosphatase. It appears that a single enzyme may act as both exopolyphosphatase (Ppx) and guanosine pentaphosphate phosphohydrolase (GppA) in a number of species. Members of the seed alignment use to define this exception-level model are encoded adjacent to a polyphosphate kinase 1 gene, and the trusted cutoff is set high enough (425) that no genome has a second hit. Therefore all members may be presumed to at least share exopolyphospatase activity, and may lack GppA activity. GppA acts in the stringent response.
Probab=21.61 E-value=68 Score=35.49 Aligned_cols=17 Identities=29% Similarity=0.622 Sum_probs=15.3
Q ss_pred EEEEEeCCceEEEEEEE
Q psy6736 637 VLIFDLGGGTFDVSILT 653 (1023)
Q Consensus 637 vlV~D~GggT~dvsi~~ 653 (1023)
.+++|+|||++.++++.
T Consensus 127 ~~v~DiGGGSte~~~~~ 143 (300)
T TIGR03706 127 GLVVDIGGGSTELILGK 143 (300)
T ss_pred cEEEEecCCeEEEEEec
Confidence 49999999999999875
No 285
>PRK13310 N-acetyl-D-glucosamine kinase; Provisional
Probab=21.59 E-value=3e+02 Score=30.26 Aligned_cols=48 Identities=23% Similarity=0.257 Sum_probs=30.8
Q ss_pred CcCeEEEEcCCCCcHHHHHHHHHHcCC--------ccccccCCCchhHHhHHHHHH
Q psy6736 315 QIHDIVLVGGSTRIPKVQKLLQDFFNG--------KELNKSINPDEAVAYGAAVQA 362 (1023)
Q Consensus 315 ~i~~V~LvGG~sr~p~v~~~l~~~f~~--------~~i~~~~~pd~aVa~GAa~~a 362 (1023)
|++.|+|-||.+..+.+.+.|++.+.. .++......+.+.++|||..+
T Consensus 245 dP~~IvlgG~~~~~~~~~~~l~~~~~~~~~~~~~~~~i~~s~~~~~a~~~GAa~~~ 300 (303)
T PRK13310 245 DPHLVVLGGGLSNFDAIYEQLPKRLPRHLLPVARVPRIEKARHGDAGGVRGAAFLH 300 (303)
T ss_pred CCCEEEECCcccChHHHHHHHHHHHHHHhcccccCceEEEcccCchHHHHhHHHHh
Confidence 458888877777666666666555421 123334455678899999765
No 286
>PRK09557 fructokinase; Reviewed
Probab=21.59 E-value=1.4e+02 Score=33.05 Aligned_cols=48 Identities=23% Similarity=0.287 Sum_probs=28.9
Q ss_pred ccceEEEecCccCcHHHHHHHHHhhcC--------cccCCCCCCccceecchHHHH
Q psy6736 772 QIHDIVLVGGSTRIPKVQKLLQDFFNG--------KELNKSINPDEAVAYGAAVQA 819 (1023)
Q Consensus 772 ~i~~V~LvGG~srip~v~~~l~~~f~~--------~~~~~~~~p~~aVa~GAa~~a 819 (1023)
+++.|+|-||.++.+.+.+.|++.+.. .++....-.+.+.++|||+.+
T Consensus 244 dP~~IvlgG~~~~~~~~~~~l~~~~~~~~~~~~~~~~i~~s~~~~~a~~~GAa~~~ 299 (301)
T PRK09557 244 DPDVIVLGGGMSNVDRLYPTLPALLKQYVFGGECETPVRKALHGDSSGVRGAAWLW 299 (301)
T ss_pred CCCEEEEcCcccchHHHHHHHHHHHHHHhcccccCCeEEEcccCCchhhhhhhHhh
Confidence 467888888887776665555554411 122233344567888888754
No 287
>PLN02854 3-ketoacyl-CoA synthase
Probab=21.45 E-value=1.9e+02 Score=34.52 Aligned_cols=45 Identities=4% Similarity=0.171 Sum_probs=36.2
Q ss_pred HHHHHHHHHHHHHcCCCccCcCeEEE-EcCCCCcHHHHHHHHHHcC
Q psy6736 296 RGTMEPVEKSLRDAKMDKAQIHDIVL-VGGSTRIPKVQKLLQDFFN 340 (1023)
Q Consensus 296 ~~i~~~i~~~l~~~~~~~~~i~~V~L-vGG~sr~p~v~~~l~~~f~ 340 (1023)
.-+...++++|++++++++|||.|++ +.+....|.+..+|.+.++
T Consensus 190 ~v~~~~~~~lL~kaGi~p~dID~LIv~cS~~~p~PSlAa~I~n~LG 235 (521)
T PLN02854 190 AVMFGALDSLFSKTGVKPRDIGILIVNCSLFNPTPSLSAMIVNHYK 235 (521)
T ss_pred HHHHHHHHHHHHHcCCCHHHCCEEEEECCCCCCCCCHHHHHHHHhC
Confidence 33566778899999999999999886 3444458999999999994
No 288
>COG2441 Predicted butyrate kinase [Energy production and conversion]
Probab=21.36 E-value=2.3e+02 Score=30.44 Aligned_cols=53 Identities=34% Similarity=0.434 Sum_probs=33.4
Q ss_pred CcCeEEEEcCCCCcHH----HHHHHHHHcCC----ccc--cccCCCchhHHhHHHHHHHHHhC
Q psy6736 315 QIHDIVLVGGSTRIPK----VQKLLQDFFNG----KEL--NKSINPDEAVAYGAAVQAAILHG 367 (1023)
Q Consensus 315 ~i~~V~LvGG~sr~p~----v~~~l~~~f~~----~~i--~~~~~pd~aVa~GAa~~a~~l~~ 367 (1023)
..+.|+|.|-++++|- |++.|++.|.. ..+ ....-----.|.|||+.|..+++
T Consensus 273 ~pd~iylSGrf~~~~~~~~dv~~~l~d~~s~~g~~~evr~le~~~K~KeaA~GaAiiAnaiAG 335 (374)
T COG2441 273 YPDAIYLSGRFSRIPRFFSDVKEKLRDAFSSYGFGIEVRKLESRAKAKEAAEGAAIIANAIAG 335 (374)
T ss_pred CcceEEEeeecccccchhhHHHHHHHHHHhhcCccceeehhhhhhhhhhhccchhhhhhhhcc
Confidence 4588999999999875 56666666621 111 11111223467899998876665
No 289
>PF08392 FAE1_CUT1_RppA: FAE1/Type III polyketide synthase-like protein; InterPro: IPR013601 This domain is found in proteins that are described as 3-ketoacyl-CoA synthases, type III polyketide synthases, fatty acid elongases and fatty acid condensing enzymes, and are found in both prokaryotic and eukaryotic (mainly plant) species. The region contains the active site residues, as well as motifs involved in substrate binding []. ; GO: 0016747 transferase activity, transferring acyl groups other than amino-acyl groups, 0006633 fatty acid biosynthetic process, 0016020 membrane
Probab=21.26 E-value=1.9e+02 Score=31.62 Aligned_cols=44 Identities=11% Similarity=0.175 Sum_probs=37.8
Q ss_pred HHHHHHHHHHHHcCCCccCcCe-EEEEcCCCCcHHHHHHHHHHcC
Q psy6736 297 GTMEPVEKSLRDAKMDKAQIHD-IVLVGGSTRIPKVQKLLQDFFN 340 (1023)
Q Consensus 297 ~i~~~i~~~l~~~~~~~~~i~~-V~LvGG~sr~p~v~~~l~~~f~ 340 (1023)
-+...|+++|+++++++.|||. |+-+..++-.|.+-.+|.+.|+
T Consensus 86 v~f~av~~LL~ktgv~p~dIdiLVvncs~f~ptPSLsamIvnr~~ 130 (290)
T PF08392_consen 86 VIFGAVDDLLAKTGVKPSDIDILVVNCSLFNPTPSLSAMIVNRYG 130 (290)
T ss_pred HHHHHHHHHHHHcCCCHHHCCEEEEECcCCCcCCcHHHHHHHHhC
Confidence 3567788999999999999998 4566778999999999999993
No 290
>PRK05082 N-acetylmannosamine kinase; Provisional
Probab=21.26 E-value=1.5e+02 Score=32.58 Aligned_cols=48 Identities=23% Similarity=0.187 Sum_probs=31.0
Q ss_pred ccceEEEecCccCcHHHHHHHHHhhcC------cccCCCCCCccceecchHHHH
Q psy6736 772 QIHDIVLVGGSTRIPKVQKLLQDFFNG------KELNKSINPDEAVAYGAAVQA 819 (1023)
Q Consensus 772 ~i~~V~LvGG~srip~v~~~l~~~f~~------~~~~~~~~p~~aVa~GAa~~a 819 (1023)
+++.|+|-||.+..+.+.+.+++.+.. .++......+.+.+.|||.++
T Consensus 233 dpe~IvlgG~~~~~~~~~~~i~~~l~~~~~~~~~~i~~s~~~~~~~~~GAa~~~ 286 (291)
T PRK05082 233 DCQCVVLGGSVGLAEGYLELVQAYLAQEPAIYHVPLLAAHYRHDAGLLGAALWA 286 (291)
T ss_pred CCCEEEEcCccccHHHHHHHHHHHHHhcccccCCeEEECccCCchhhhhHHHHh
Confidence 467888888877666655666665532 122333345678899999876
No 291
>TIGR00329 gcp_kae1 metallohydrolase, glycoprotease/Kae1 family. This subfamily includes the well-studied secreted O-sialoglycoprotein endopeptidase (glycoprotease, EC 3.4.24.57) of Pasteurella haemolytica, a pathogen. A member from Riemerella anatipestifer, associated with cohemolysin activity, likewise is exported without benefit of a classical signal peptide and shows glycoprotease activity on the test substrate glycophorin. However, archaeal members of this subfamily show unrelated activities as demonstrated in Pyrococcus abyssi: DNA binding, iron binding, apurinic endonuclease activity, genomic association with a kinase domain, and no glycoprotease activity. This family thus pulls together a set of proteins as a homology group that appears to be near-universal in life, yet heterogeneous in assayed function between bacteria and archaea.
Probab=21.16 E-value=1.1e+02 Score=33.83 Aligned_cols=37 Identities=24% Similarity=0.551 Sum_probs=28.0
Q ss_pred HHHHHHHHHHHcCCCccCcCeEEEEcCCCCcHHHHHHHHHHc
Q psy6736 298 TMEPVEKSLRDAKMDKAQIHDIVLVGGSTRIPKVQKLLQDFF 339 (1023)
Q Consensus 298 i~~~i~~~l~~~~~~~~~i~~V~LvGG~sr~p~v~~~l~~~f 339 (1023)
+.+.++++++.. .++.|+|.||.+...++++.|.+.+
T Consensus 246 l~~~~~~~~~~~-----g~~~vvlsGGVa~N~~L~~~l~~~~ 282 (305)
T TIGR00329 246 LIEKTKRALKDT-----GPKELVLVGGVSANKRLREMLETLC 282 (305)
T ss_pred HHHHHHHHHHHc-----CCCEEEEECCHHHHHHHHHHHHHHH
Confidence 334444555443 4678999999999999999998876
No 292
>TIGR02707 butyr_kinase butyrate kinase. This model represents an enzyme family in which members are designated either butryate kinase or branched-chain carboxylic acid kinase. The EC designation 2.7.2.7 describes an enzyme with relatively broad specificity; gene products whose context suggests a role in metabolism of aliphatic amino acids are likely to act as branched-chain carboxylic acid kinase. The gene typically found adjacent, ptb (phosphate butyryltransferase), likewise encodes an enzyme that may have a broad specificity that includes a role in aliphatic amino acid cabolism.
Probab=20.88 E-value=1.3e+02 Score=34.14 Aligned_cols=45 Identities=22% Similarity=0.152 Sum_probs=31.7
Q ss_pred CcCeEEEEcCCCCcHHHHHHHHHHcCCc-cc--cccCCCchhHHhHHH
Q psy6736 315 QIHDIVLVGGSTRIPKVQKLLQDFFNGK-EL--NKSINPDEAVAYGAA 359 (1023)
Q Consensus 315 ~i~~V~LvGG~sr~p~v~~~l~~~f~~~-~i--~~~~~pd~aVa~GAa 359 (1023)
++|.|++.||.+..+.+++.|.+.+.-. ++ ....+-.++.|.||.
T Consensus 293 ~pD~IV~gGGI~e~~~l~~~I~~~l~~~a~v~~~pg~~e~~ala~ga~ 340 (351)
T TIGR02707 293 KVDAIVLTGGLAYSKYFVSEIIKRVSFIAPVLVYPGEDEMEALAEGAL 340 (351)
T ss_pred CCCEEEEcchhhcCHHHHHHHHHHHHhhCCEEEeCCcHHHHHHHHhHH
Confidence 5799999999999999999998887322 22 222233467777775
No 293
>COG2433 Uncharacterized conserved protein [Function unknown]
Probab=20.86 E-value=8.4e+02 Score=29.47 Aligned_cols=70 Identities=21% Similarity=0.261 Sum_probs=32.9
Q ss_pred HHHHHHHHHHhHHHHHHHHHhhhhhhhhhccCCHHHHHHHHHhhHHHHHHHhhCCccCHHHHHHHHHHHHHHHHHHHHHH
Q psy6736 516 KQKAVISAKNSLESYCFNMKSTVEDEKLKDKISDAERTQILDKCNDVIKWLDANQLAEKEEFEHKQKELEAICNPIITKL 595 (1023)
Q Consensus 516 ~~~~~~~a~N~lE~~iy~~~~~l~~~~~~~~~~~~e~~~l~~~l~~~~~WL~~~~~a~~~~~~~kl~~L~~~~~pi~~r~ 595 (1023)
.++++++.+++|+++-.+++..+.. .-+.......+...+.-|.+. ....++++.++.+|+++ +.
T Consensus 448 ~k~eie~L~~~l~~~~r~~~~~~~~--------~rei~~~~~~I~~L~~~L~e~-~~~ve~L~~~l~~l~k~------~~ 512 (652)
T COG2433 448 LKREIEKLESELERFRREVRDKVRK--------DREIRARDRRIERLEKELEEK-KKRVEELERKLAELRKM------RK 512 (652)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhh--------hHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHH------Hh
Confidence 3344555566666665555533321 122233333333333333322 23456666677766654 33
Q ss_pred HcccC
Q psy6736 596 YQGSG 600 (1023)
Q Consensus 596 ~e~~g 600 (1023)
.+.+|
T Consensus 513 lE~sG 517 (652)
T COG2433 513 LELSG 517 (652)
T ss_pred hhhcC
Confidence 46666
No 294
>PF02685 Glucokinase: Glucokinase; InterPro: IPR003836 Glucokinases 2.7.1.2 from EC are found in invertebrates and microorganisms and are highly specific for glucose. These enzymes phosphorylate glucose using ATP as a donor to give glucose-6-phosphate and ADP [].; GO: 0004340 glucokinase activity, 0005524 ATP binding, 0006096 glycolysis, 0051156 glucose 6-phosphate metabolic process; PDB: 1SZ2_B 1Q18_B 2Q2R_B.
Probab=20.52 E-value=8.1e+02 Score=27.29 Aligned_cols=92 Identities=14% Similarity=0.207 Sum_probs=52.2
Q ss_pred HHcCCceeeeecchHHHHHHhccccccCccccc-cCCCCCcEEEEEEeCCceEEEEEEEEeCCEEEEEEec-CCCCcc-H
Q psy6736 139 TIAGLNVLRIINEPTAAAIAYGLDKKVGSTAVE-YNGSGERNVLIFDLGGGTFDVSILTIEDGIFEVKSTA-GDTHLG-G 215 (1023)
Q Consensus 139 ~~AGl~~~~li~Ep~AAal~y~~~~~~~~~~~~-~~~~~~~~vlV~D~GggT~dvsv~~~~~~~~~v~~~~-~~~~lG-G 215 (1023)
+..|++.+.|||+=+|.|++...-...+...+. -........+|+=.|-| +-++.+--.++...++.+. |...+. -
T Consensus 88 ~~lg~~~v~liNDfeA~a~gl~~L~~~~l~~l~~g~~~~~~~~~Vig~GTG-LG~a~l~~~~~~~~v~~sEgGH~~fap~ 166 (316)
T PF02685_consen 88 QRLGIPRVRLINDFEAQAYGLPALDPEDLVTLQPGEPDPGGPRAVIGPGTG-LGVALLVPDGDGYYVLPSEGGHVDFAPR 166 (316)
T ss_dssp CCCT-TCEEEEEHHHHHHHHHHHHHHCCECCHCCEESSTTS-EEEEEESSS-EEEEEEEEETTEEEEEEE-GGGSB---S
T ss_pred HHhCCceEEEEcccchheeccCCCCHHHeeeccCCCCCCCCcEEEEEcCCC-cEEEEEEecCCceEeCCCccccccCCCC
Confidence 345889999999999998765321111110000 01124567899988876 5555555555555566554 444443 3
Q ss_pred HHHHHHHHHHHHHHHH
Q psy6736 216 EDFDNRMVNHFVQEFK 231 (1023)
Q Consensus 216 ~~~D~~l~~~l~~~~~ 231 (1023)
.+.+..|.+++.+++.
T Consensus 167 ~~~e~~l~~~l~~~~~ 182 (316)
T PF02685_consen 167 TDEEAELLRFLRRRYG 182 (316)
T ss_dssp SHHHHHHHHHHHHHCT
T ss_pred CHHHHHHHHHHHHhcC
Confidence 4677788888888773
No 295
>PRK13310 N-acetyl-D-glucosamine kinase; Provisional
Probab=20.27 E-value=1.5e+02 Score=32.79 Aligned_cols=48 Identities=23% Similarity=0.257 Sum_probs=29.9
Q ss_pred ccceEEEecCccCcHHHHHHHHHhhcC--------cccCCCCCCccceecchHHHH
Q psy6736 772 QIHDIVLVGGSTRIPKVQKLLQDFFNG--------KELNKSINPDEAVAYGAAVQA 819 (1023)
Q Consensus 772 ~i~~V~LvGG~srip~v~~~l~~~f~~--------~~~~~~~~p~~aVa~GAa~~a 819 (1023)
+++.|+|-||.+..|.+.+.|++.+.. .++....-.+.+.++|||..+
T Consensus 245 dP~~IvlgG~~~~~~~~~~~l~~~~~~~~~~~~~~~~i~~s~~~~~a~~~GAa~~~ 300 (303)
T PRK13310 245 DPHLVVLGGGLSNFDAIYEQLPKRLPRHLLPVARVPRIEKARHGDAGGVRGAAFLH 300 (303)
T ss_pred CCCEEEECCcccChHHHHHHHHHHHHHHhcccccCceEEEcccCchHHHHhHHHHh
Confidence 467888877777666555666555421 122333445678889998776
No 296
>PF02801 Ketoacyl-synt_C: Beta-ketoacyl synthase, C-terminal domain; InterPro: IPR014031 Beta-ketoacyl-ACP synthase 2.3.1.41 from EC (KAS) [] is the enzyme that catalyzes the condensation of malonyl-ACP with the growing fatty acid chain. It is found as a component of a number of enzymatic systems, including fatty acid synthetase (FAS), which catalyzes the formation of long-chain fatty acids from acetyl-CoA, malonyl-CoA and NADPH; the multi-functional 6-methysalicylic acid synthase (MSAS) from Penicillium patulum [], which is involved in the biosynthesis of a polyketide antibiotic; polyketide antibiotic synthase enzyme systems; Emericella nidulans multifunctional protein Wa, which is involved in the biosynthesis of conidial green pigment; Rhizobium nodulation protein nodE, which probably acts as a beta-ketoacyl synthase in the synthesis of the nodulation Nod factor fatty acyl chain; and yeast mitochondrial protein CEM1. The condensation reaction is a two step process, first the acyl component of an activated acyl primer is transferred to a cysteine residue of the enzyme and is then condensed with an activated malonyl donor with the concomitant release of carbon dioxide. This entry represents the C-terminal domain of beta-ketoacyl-ACP synthases. The active site is contained in a cleft betweeen N- and C-terminal domains, with residues from both domains contributing to substrate binding and catalysis [].; PDB: 2UV8_B 3HMJ_A 2VKZ_C 4EWG_A 1TQY_H 1E5M_A 1J3N_B 2VZ8_A 2VZ9_B 3O04_A ....
Probab=20.23 E-value=1.1e+02 Score=28.44 Aligned_cols=46 Identities=17% Similarity=0.270 Sum_probs=31.6
Q ss_pred HHHHHHHHHHHHHcCCCccCcCeEEEEcCCCCc--HHHHHHHHHHcCC
Q psy6736 296 RGTMEPVEKSLRDAKMDKAQIHDIVLVGGSTRI--PKVQKLLQDFFNG 341 (1023)
Q Consensus 296 ~~i~~~i~~~l~~~~~~~~~i~~V~LvGG~sr~--p~v~~~l~~~f~~ 341 (1023)
......|+++|+++++.+++|+.|..-|-++.. +.=.+.|.+.|+.
T Consensus 25 ~~~~~~i~~al~~agi~~~~I~~i~~hg~Gt~~~D~~E~~ai~~~~~~ 72 (119)
T PF02801_consen 25 AALARAIRRALADAGISPEDIDYIEAHGTGTPLGDAAEAEAIARVFGD 72 (119)
T ss_dssp HHHHHHHHHHHHHHTS-GGGEEEEE----SSHHHHHHHHHHHHHHHGG
T ss_pred HHHHHHHHHHHhhhccccccceeeeeeccccccchhhhhhhhhhhhcc
Confidence 445677999999999999999999999877775 3334567888854
No 297
>PLN03168 chalcone synthase; Provisional
Probab=20.03 E-value=3.1e+02 Score=31.58 Aligned_cols=52 Identities=17% Similarity=0.264 Sum_probs=39.9
Q ss_pred HHhHHHHHHHHHHHHHHHHHcCCCccCcCeEEEEcCC-CCcHHHHHHHHHHcC
Q psy6736 289 ELNADLFRGTMEPVEKSLRDAKMDKAQIHDIVLVGGS-TRIPKVQKLLQDFFN 340 (1023)
Q Consensus 289 ~~~~~~~~~i~~~i~~~l~~~~~~~~~i~~V~LvGG~-sr~p~v~~~l~~~f~ 340 (1023)
-..+...+-..+..+++|+++++.++|||.|+++-.+ -.+|.+.-.|.+.+|
T Consensus 96 ~~~~~a~~La~~Aa~~AL~~ag~~~~dId~lI~~T~Tg~~~Ps~a~~l~~~LG 148 (389)
T PLN03168 96 IVVVQVPKLAAEAAQKAIKEWGGRKSDITHIVFATTSGVNMPGADHALAKLLG 148 (389)
T ss_pred HHHHHHHHHHHHHHHHHHHHcCCCHHHCCEEEEECCCCCCCccHHHHHHHHhC
Confidence 3334445555778899999999999999998766433 358999999999984
Done!