Query psy6739
Match_columns 56
No_of_seqs 112 out of 1059
Neff 8.4
Searched_HMMs 29240
Date Fri Aug 16 17:13:00 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy6739.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/6739hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3dob_A Heat shock 70 kDa prote 99.7 3.5E-18 1.2E-22 94.5 5.9 55 2-56 70-124 (152)
2 3h0x_A 78 kDa glucose-regulate 99.7 6.9E-18 2.4E-22 93.2 6.9 55 2-56 70-124 (152)
3 3dqg_A Heat shock 70 kDa prote 99.7 7.8E-18 2.7E-22 93.0 6.4 54 2-56 70-123 (151)
4 3n8e_A Stress-70 protein, mito 99.7 4.2E-17 1.4E-21 92.4 6.5 54 2-56 90-143 (182)
5 4e81_A Chaperone protein DNAK; 99.7 8.4E-17 2.9E-21 93.1 6.3 54 2-56 71-124 (219)
6 2op6_A Heat shock 70 kDa prote 99.7 1.9E-16 6.6E-21 87.0 6.6 55 2-56 70-124 (152)
7 1u00_A HSC66, chaperone protei 99.6 5.3E-15 1.8E-19 85.7 6.5 54 2-56 68-121 (227)
8 1q5l_A Chaperone protein DNAK; 99.6 1.7E-14 5.8E-19 78.3 7.8 46 2-47 87-132 (135)
9 4b9q_A Chaperone protein DNAK; 99.5 6.6E-14 2.2E-18 89.4 5.7 54 2-56 459-512 (605)
10 1yuw_A Heat shock cognate 71 k 99.4 4.1E-13 1.4E-17 85.1 6.3 55 2-56 461-515 (554)
11 2v7y_A Chaperone protein DNAK; 99.4 9.3E-13 3.2E-17 82.6 6.5 54 2-56 428-481 (509)
12 2kho_A Heat shock protein 70; 99.4 8.4E-13 2.9E-17 84.4 6.2 54 2-56 459-512 (605)
13 3d2f_A Heat shock protein homo 99.2 2.2E-11 7.6E-16 78.9 5.2 55 2-56 464-529 (675)
14 3q9p_A Heat shock protein beta 76.5 1.4 4.8E-05 21.3 1.6 17 16-32 66-82 (85)
15 2hc5_A ORF 99, hypothetical pr 73.7 3.4 0.00011 21.6 2.7 25 15-39 56-81 (117)
16 3l1e_A Alpha-crystallin A chai 73.4 1.2 4.2E-05 22.4 1.0 20 17-36 72-91 (106)
17 1u07_A TONB protein; beta-hair 72.2 4.1 0.00014 19.6 2.7 15 14-28 26-40 (90)
18 2wj5_A Heat shock protein beta 71.8 1.6 5.6E-05 21.7 1.2 22 17-38 71-92 (101)
19 2y1y_A Alpha-crystallin B chai 67.4 4 0.00014 19.7 2.1 16 17-32 66-81 (90)
20 2k9k_A TONB2; metal transport; 65.3 9.5 0.00033 18.8 3.3 15 14-28 41-55 (106)
21 2klr_A Alpha-crystallin B chai 64.1 4 0.00014 22.5 1.8 30 17-46 133-163 (175)
22 1lr0_A TOLA protein; domain-sw 61.4 16 0.00053 19.1 5.0 16 13-28 52-67 (129)
23 4eld_A MJ16.5-P1, small heat s 61.1 2.2 7.5E-05 22.9 0.4 16 23-38 139-154 (161)
24 1wvl_A DNA-binding proteins 7A 60.2 2.9 9.9E-05 20.0 0.7 12 16-27 29-40 (80)
25 3iez_A RAS GTPase-activating-l 57.1 13 0.00045 19.3 3.0 32 2-35 38-70 (114)
26 2y7s_A Factor H binding protei 56.0 8.3 0.00028 22.8 2.3 28 4-31 17-44 (256)
27 2xiw_A DNA-binding protein 7D; 55.6 3.8 0.00013 19.6 0.7 14 16-29 40-53 (79)
28 3isu_A RAS GTPase-activating-l 55.2 10 0.00034 20.0 2.3 31 2-34 41-72 (121)
29 2grx_C Protein TONB; beta barr 50.3 18 0.00061 20.9 3.0 15 14-28 165-179 (229)
30 2fp7_A Serine protease subunit 48.8 19 0.00065 16.3 2.8 18 11-30 28-45 (54)
31 3rdl_A Protein kinase C alpha 48.0 25 0.00086 17.4 3.8 20 9-31 3-22 (137)
32 2k6w_A Putative uncharacterize 47.3 29 0.00098 17.9 3.5 26 7-33 92-117 (120)
33 2ijo_A Polyprotein; WEST NIle 47.1 21 0.00073 16.4 2.8 18 11-30 24-41 (58)
34 1op4_A Neural-cadherin; beta s 46.8 35 0.0012 18.7 4.2 27 18-44 78-119 (159)
35 3sbc_A Peroxiredoxin TSA1; alp 46.2 32 0.0011 19.5 3.7 26 14-39 142-168 (216)
36 2ohd_A Probable molybdenum cof 45.2 37 0.0013 18.6 3.6 21 12-33 72-92 (151)
37 3ke6_A Protein RV1364C/MT1410; 44.1 51 0.0018 19.9 4.8 27 14-40 321-347 (399)
38 2iih_A Molybdenum cofactor bio 43.9 40 0.0014 18.5 3.7 25 12-36 79-104 (157)
39 1x0h_A P195, RAS GTPase-activa 42.0 28 0.00095 17.9 2.7 23 13-35 35-58 (112)
40 2ekn_A Probable molybdenum cof 41.8 40 0.0014 18.5 3.5 21 12-33 81-101 (159)
41 1h8g_A Major autolysin; cholin 41.1 17 0.0006 17.7 1.9 12 18-29 83-94 (95)
42 2bol_A TSP36, small heat shock 40.7 13 0.00045 22.3 1.6 20 16-35 170-189 (314)
43 3gla_A Low molecular weight he 38.7 35 0.0012 16.4 2.8 16 14-32 80-95 (100)
44 1zps_A PRA-CH, phosphoribosyl- 38.3 27 0.00091 18.8 2.4 30 15-44 12-41 (138)
45 1rh8_A Piccolo protein; beta-s 38.1 39 0.0013 16.8 4.1 18 14-32 8-25 (142)
46 4gyx_A Type III collagen fragm 38.0 13 0.00045 14.6 0.9 9 6-14 5-13 (31)
47 3fbk_A RGS3, RGP3, regulator o 37.6 38 0.0013 17.3 2.9 19 14-32 15-34 (153)
48 3mfb_A Uncharacterized protein 37.2 52 0.0018 18.0 4.1 22 14-35 21-43 (157)
49 3k6d_A T-cadherin; cell adhesi 37.0 38 0.0013 16.3 2.9 28 19-46 50-79 (99)
50 1dwm_A LUTI, linum usitatissin 35.9 21 0.00072 16.6 1.6 13 15-27 51-63 (70)
51 1ekr_A Molybdenum cofactor bio 35.3 46 0.0016 18.3 3.1 23 12-34 81-104 (161)
52 1x9l_A CUI-DR1885; copper bind 35.0 54 0.0019 17.5 4.1 27 7-34 117-143 (149)
53 1c8c_A DNA-binding protein 7A; 34.3 16 0.00053 16.7 0.9 11 17-27 30-41 (64)
54 3if4_A Integron cassette prote 34.3 35 0.0012 17.7 2.3 17 15-31 26-42 (119)
55 3u95_A Glycoside hydrolase, fa 34.2 27 0.00093 22.0 2.3 22 5-27 371-392 (477)
56 2omz_B Epithelial-cadherin; le 33.7 46 0.0016 16.3 2.9 28 19-46 55-84 (105)
57 3imh_A Galactose-1-epimerase; 32.7 51 0.0017 19.8 3.2 23 12-34 141-163 (338)
58 4fei_A Heat shock protein-rela 32.2 48 0.0016 16.1 2.8 17 14-33 77-93 (102)
59 1hcx_A Major autolysin; cholin 31.0 30 0.001 17.8 1.8 12 18-29 115-126 (127)
60 1tol_A G3P - TOLA, protein (fu 30.0 36 0.0012 19.7 2.2 22 10-32 151-173 (222)
61 2p92_A Hypothetical protein; u 29.7 50 0.0017 17.2 2.6 19 8-26 15-33 (126)
62 2ov7_A 50S ribosomal protein L 27.8 62 0.0021 17.2 2.7 15 17-31 70-84 (137)
63 1mit_A RCMTI-V, trypsin inhibi 26.9 43 0.0015 15.5 1.8 12 16-27 51-62 (69)
64 1to2_I Chymotrypsin inhibitor 25.6 50 0.0017 15.0 1.9 12 16-27 46-57 (64)
65 3k6f_A T-cadherin; cell adhesi 25.6 65 0.0022 15.5 2.9 27 19-45 51-79 (100)
66 3q1n_A Galactose mutarotase re 25.2 1.1E+02 0.0036 17.7 3.8 21 13-33 109-130 (294)
67 3fcg_A F1 capsule-anchoring pr 24.6 73 0.0025 15.7 3.3 24 22-46 57-80 (90)
68 4hyz_A Uncharacterized protein 24.6 68 0.0023 16.0 2.5 14 14-27 96-109 (114)
69 3nre_A Aldose 1-epimerase; str 24.5 1.1E+02 0.0037 17.7 3.9 17 13-30 115-131 (291)
70 2ggv_A NS2B, non-structural pr 24.4 27 0.00092 15.9 0.8 16 13-30 26-41 (56)
71 1vbw_A Trypsin inhibitor BGIT; 24.4 54 0.0019 15.1 1.9 13 15-27 49-61 (68)
72 2jwk_A Protein TOLR; periplasm 23.6 60 0.0021 14.4 2.3 14 17-30 5-18 (74)
73 2eey_A Molybdopterin biosynthe 23.4 1E+02 0.0035 17.0 3.8 24 12-35 81-107 (162)
74 3zxo_A Redox sensor histidine 23.1 73 0.0025 15.2 3.7 23 14-38 63-85 (129)
75 4g2e_A Peroxiredoxin; redox pr 22.9 86 0.003 15.9 2.9 15 15-29 119-133 (157)
76 2con_A RUH-035 protein, NIN on 22.9 17 0.00058 17.7 -0.1 18 14-31 41-58 (79)
77 1obb_A Maltase, alpha-glucosid 22.8 57 0.0019 20.7 2.3 24 5-29 381-404 (480)
78 1zo0_A ODC-AZ, ornithine decar 22.7 95 0.0033 16.3 3.6 24 23-46 4-27 (126)
79 4gio_A Putative lipoprotein; u 22.6 86 0.0029 15.8 4.7 29 8-37 20-48 (107)
80 3ppe_A Vascular endothelial ca 22.4 83 0.0028 17.0 2.7 28 19-46 153-182 (203)
81 3aab_A Putative uncharacterize 22.3 40 0.0014 17.0 1.3 15 16-33 100-114 (123)
82 3dcd_A Galactose mutarotase re 22.2 1.3E+02 0.0043 17.6 3.8 21 13-33 109-130 (307)
83 2x5p_A FBA2, fibronectin bindi 22.2 74 0.0025 16.3 2.3 15 16-30 92-106 (121)
84 1gme_A Heat shock protein 16.9 21.8 70 0.0024 16.8 2.3 18 15-35 121-138 (151)
85 2asb_A Transcription elongatio 21.7 1.3E+02 0.0045 17.6 4.1 27 23-49 97-123 (251)
86 2ci2_I Chymotrypsin inhibitor 21.6 64 0.0022 15.5 1.9 12 16-27 65-76 (83)
87 1lur_A Aldose 1-epimerase; vit 21.4 1.2E+02 0.0041 17.9 3.4 23 11-33 137-159 (339)
88 3mwx_A Aldose 1-epimerase; str 21.2 1.3E+02 0.0046 17.5 3.8 17 13-30 144-160 (326)
89 3qve_A HMG box-containing prot 21.2 1.1E+02 0.0037 16.5 3.1 21 12-32 72-94 (139)
90 2v2f_A Penicillin binding prot 21.1 42 0.0014 12.2 1.0 11 18-28 7-17 (26)
91 2f1d_A IGPD 1, imidazoleglycer 20.9 1.3E+02 0.0043 17.3 3.3 20 11-30 20-39 (207)
92 3d33_A Domain of unknown funct 20.8 96 0.0033 15.7 3.8 25 14-39 39-63 (108)
93 2l55_A SILB,silver efflux prot 20.8 84 0.0029 15.0 4.0 25 8-33 48-72 (82)
94 3kf6_B Protein TEN1; OB fold, 20.7 62 0.0021 16.6 1.8 27 2-30 12-41 (105)
95 3e9v_A Protein BTG2; B-cell tr 20.6 98 0.0034 16.0 2.6 16 15-30 100-115 (120)
96 1nsx_A Galactose mutarotase; e 20.2 1.2E+02 0.0041 18.1 3.2 22 11-32 135-156 (347)
97 2w7v_A General secretion pathw 20.2 18 0.00061 18.1 -0.3 23 14-36 26-50 (95)
98 3msw_A Uncharacterized protein 20.1 1E+02 0.0035 16.7 2.6 18 13-30 37-54 (145)
No 1
>3dob_A Heat shock 70 kDa protein F44E5.5; structural genomics, APC90015.11, peptide-binding domain, HS 2, protein structure initiative; 2.39A {Caenorhabditis elegans}
Probab=99.74 E-value=3.5e-18 Score=94.52 Aligned_cols=55 Identities=73% Similarity=1.151 Sum_probs=48.2
Q ss_pred ccCCCCCCCCcCeEEEEEEeCCCcceEEEEEeCcCCceEEEEEEcCCCCCCcccC
Q psy6739 2 LTSIPPAPRGVPQIEVTFDIDANGILNVTAIEKSTGKENKITITNDRGRLSKEDT 56 (56)
Q Consensus 2 l~~ip~~p~g~~~i~V~f~~d~nGil~V~a~~~~~~~~~~~~i~~~~~~ls~~ei 56 (56)
|.||||.|+|.++|+|+|.||.||+|+|+|.+..+|+...++|..+.+.||++||
T Consensus 70 l~gipp~p~G~~~IeVtf~iD~nGiL~Vsa~d~~tg~~~~i~I~~~~~~Ls~~ei 124 (152)
T 3dob_A 70 LSGIPPAPRGVPQIEVTFNIDANGILNVSAEDKSTGKSNRITIQNEKGRLTQSDI 124 (152)
T ss_dssp EECCCCCCTTCCCEEEEEEECTTCCEEEEEEETTTCCEEEEEECCC----CHHHH
T ss_pred EeCCCCCCCCCceEEEEEEeCCCCeEEEEEEEcCCCCEEEEEEEcCCCCCCHHHH
Confidence 6799999999999999999999999999999999999999999887777998874
No 2
>3h0x_A 78 kDa glucose-regulated protein homolog; structural genomics, APC89502.3, peptide binding, chaperone, BIP, PSI-2; 1.92A {Saccharomyces cerevisiae} PDB: 1ckr_A 7hsc_A
Probab=99.74 E-value=6.9e-18 Score=93.24 Aligned_cols=55 Identities=71% Similarity=1.121 Sum_probs=51.5
Q ss_pred ccCCCCCCCCcCeEEEEEEeCCCcceEEEEEeCcCCceEEEEEEcCCCCCCcccC
Q psy6739 2 LTSIPPAPRGVPQIEVTFDIDANGILNVTAIEKSTGKENKITITNDRGRLSKEDT 56 (56)
Q Consensus 2 l~~ip~~p~g~~~i~V~f~~d~nGil~V~a~~~~~~~~~~~~i~~~~~~ls~~ei 56 (56)
|.||||.|+|.++|+|+|.||.||+|+|+|.+..+|+...++|..+.+.||++||
T Consensus 70 l~gipp~p~G~~~I~Vtf~iD~nGiL~V~a~d~~tg~~~~i~I~~~~~~ls~~ei 124 (152)
T 3h0x_A 70 LTGIPPAPRGVPQIEVTFALDANGILKVSATDKGTGKSESITITNDKGRLTQEEI 124 (152)
T ss_dssp ECCCCCCCTTCSCEEEEEEECTTSEEEEEEEETTTCCEEEEEEECCTTCCCHHHH
T ss_pred EeCCCCCCCCCceEEEEEEEcCCCEEEEEEEEcCCCcEeEEEEecCCCCCCHHHH
Confidence 6799999999999999999999999999999999999999999987678998874
No 3
>3dqg_A Heat shock 70 kDa protein F; structural genomics, APC90008.12, HSP70 protein, peptide-BIN domain, PSI-2, protein structure initiative; 1.72A {Caenorhabditis elegans}
Probab=99.73 E-value=7.8e-18 Score=93.01 Aligned_cols=54 Identities=65% Similarity=1.050 Sum_probs=50.8
Q ss_pred ccCCCCCCCCcCeEEEEEEeCCCcceEEEEEeCcCCceEEEEEEcCCCCCCcccC
Q psy6739 2 LTSIPPAPRGVPQIEVTFDIDANGILNVTAIEKSTGKENKITITNDRGRLSKEDT 56 (56)
Q Consensus 2 l~~ip~~p~g~~~i~V~f~~d~nGil~V~a~~~~~~~~~~~~i~~~~~~ls~~ei 56 (56)
|.||||.|+|.++|+|+|.||.||+|+|+|.+..+|+...++|... +.||++||
T Consensus 70 l~gipp~p~G~~~IeVtf~iD~nGiL~Vsa~d~~tg~~~~i~I~~~-~~Ls~~ei 123 (151)
T 3dqg_A 70 LVGIPPAPRGVPQVEVTFDIDANGIVNVSARDRGTGKEQQIVIQSS-GGLSKDQI 123 (151)
T ss_dssp EECCCCCCTTCSCEEEEEEECTTSEEEEEEEETTTCCEEEEEEECS-SSSCHHHH
T ss_pred EeCCCCCCCCCcEEEEEEEeccCcEEEEEEEEccCCCEeEEEEecC-CCCCHHHH
Confidence 6799999999999999999999999999999999999999999987 78999875
No 4
>3n8e_A Stress-70 protein, mitochondrial; beta-sandwich, helix, substrate binding domain, structural G consortium, SGC, chaperone; 2.80A {Homo sapiens}
Probab=99.70 E-value=4.2e-17 Score=92.36 Aligned_cols=54 Identities=67% Similarity=1.061 Sum_probs=50.8
Q ss_pred ccCCCCCCCCcCeEEEEEEeCCCcceEEEEEeCcCCceEEEEEEcCCCCCCcccC
Q psy6739 2 LTSIPPAPRGVPQIEVTFDIDANGILNVTAIEKSTGKENKITITNDRGRLSKEDT 56 (56)
Q Consensus 2 l~~ip~~p~g~~~i~V~f~~d~nGil~V~a~~~~~~~~~~~~i~~~~~~ls~~ei 56 (56)
|.||||+|+|.++|+|+|.||.||+|+|+|.+..+|+...++|... +.||++||
T Consensus 90 l~gipp~p~G~~~IeVtf~iD~nGiL~VsA~d~~tg~~~~i~I~~~-~~Ls~eei 143 (182)
T 3n8e_A 90 LIGIPPAPRGVPQIEVTFDIDANGIVHVSAKDKGTGREQQIVIQSS-GGLSKDDI 143 (182)
T ss_dssp ECCCCCCCTTCSCEEEEEEECTTCCEEEEEEETTTCCEEEEEESCC-CCCCHHHH
T ss_pred EcCCCCCCCCCeeEEEEEEEecCCEEEEEEEEcCCCCEeeEEEecC-ccCCHHHH
Confidence 6799999999999999999999999999999999999999999887 78998874
No 5
>4e81_A Chaperone protein DNAK; chaperone; 1.90A {Escherichia coli} PDB: 3dpp_A* 3dpq_A* 3qnj_A 3dpo_A 1dkz_A 1dky_A 1dkx_A 1bpr_A 2bpr_A 1dg4_A
Probab=99.68 E-value=8.4e-17 Score=93.11 Aligned_cols=54 Identities=59% Similarity=0.953 Sum_probs=50.1
Q ss_pred ccCCCCCCCCcCeEEEEEEeCCCcceEEEEEeCcCCceEEEEEEcCCCCCCcccC
Q psy6739 2 LTSIPPAPRGVPQIEVTFDIDANGILNVTAIEKSTGKENKITITNDRGRLSKEDT 56 (56)
Q Consensus 2 l~~ip~~p~g~~~i~V~f~~d~nGil~V~a~~~~~~~~~~~~i~~~~~~ls~~ei 56 (56)
|.||||.|+|.++|+|+|.||.||+|+|+|.+..+|+...++|... ++||++||
T Consensus 71 l~gipp~p~G~~~IeVtf~iD~nGiL~V~a~d~~tg~~~~i~I~~~-~~Ls~eeI 124 (219)
T 4e81_A 71 LDGINPAPRGMPQIEVTFDIDADGILHVSAKDKNSGKEQKITIKAS-SGLNEDEI 124 (219)
T ss_dssp EECCCCCSTTCSCEEEEEEECTTCCEEEEEEETTTCCEEEEEECTT-CSCCHHHH
T ss_pred EeCCCCCCCCCceEEEEEEeCCCCCEeeeeeccccCccceEeeecc-ccccHHHH
Confidence 6799999999999999999999999999999999999999999876 56998875
No 6
>2op6_A Heat shock 70 kDa protein D; HSP70/peptide-binding domain, structural genomics, APC90014. 2, protein structure initiative; 1.85A {Caenorhabditis elegans}
Probab=99.67 E-value=1.9e-16 Score=87.01 Aligned_cols=55 Identities=71% Similarity=1.083 Sum_probs=50.7
Q ss_pred ccCCCCCCCCcCeEEEEEEeCCCcceEEEEEeCcCCceEEEEEEcCCCCCCcccC
Q psy6739 2 LTSIPPAPRGVPQIEVTFDIDANGILNVTAIEKSTGKENKITITNDRGRLSKEDT 56 (56)
Q Consensus 2 l~~ip~~p~g~~~i~V~f~~d~nGil~V~a~~~~~~~~~~~~i~~~~~~ls~~ei 56 (56)
|.|+||.|+|.++|+|+|.||.||+|+|+|.+..+|+...+.|....+.||++||
T Consensus 70 l~gipp~p~G~~~I~V~f~id~nGiL~V~a~d~~tg~~~~i~i~~~~~~ls~eei 124 (152)
T 2op6_A 70 VTGIPPAPRGVPQIEVTFEIDVNGILHVSAEDKGTGNKNKLTITNDHNRLSPEDI 124 (152)
T ss_dssp ECCCCCCCTTCSCEEEEEEECTTSCEEEEEEETTTCCEEEEEECSSSSCCCHHHH
T ss_pred EECCCCCCCCCceEEEEEEECCCcEEEEEEEEecCCcEEEEEeeccccCCCHHHH
Confidence 6789999999999999999999999999999999999999999877677998764
No 7
>1u00_A HSC66, chaperone protein HSCA; DNAK, HSP70; 1.95A {Escherichia coli} SCOP: a.8.4.1 b.130.1.1
Probab=99.58 E-value=5.3e-15 Score=85.71 Aligned_cols=54 Identities=44% Similarity=0.693 Sum_probs=49.6
Q ss_pred ccCCCCCCCCcCeEEEEEEeCCCcceEEEEEeCcCCceEEEEEEcCCCCCCcccC
Q psy6739 2 LTSIPPAPRGVPQIEVTFDIDANGILNVTAIEKSTGKENKITITNDRGRLSKEDT 56 (56)
Q Consensus 2 l~~ip~~p~g~~~i~V~f~~d~nGil~V~a~~~~~~~~~~~~i~~~~~~ls~~ei 56 (56)
|.||||.|+|.++|+|+|.||.||+|+|+|.+..+|+...++|... +.||+++|
T Consensus 68 l~gi~~~p~G~~~I~Vtf~iD~nGiL~V~a~d~~tg~~~~i~i~~~-~~Ls~eei 121 (227)
T 1u00_A 68 LRGIPALPAGGAHIRVTFQVDADGLLSVTAMEKSTGVEASIQVKPS-YGLTDSEI 121 (227)
T ss_dssp ECCCCCCSTTCSCEEEEEEECTTCCEEEEEEETTTCCEEEEEECCC-SCCCHHHH
T ss_pred EeCCCCCCCCceEEEEEEEECCCCcEEEEeecccccccceEEEEec-cCCCHHHH
Confidence 6789999999999999999999999999999999999999999876 55998764
No 8
>1q5l_A Chaperone protein DNAK; HSP70, chaperone, heat shock protein; NMR {Escherichia coli} SCOP: b.130.1.1
Probab=99.57 E-value=1.7e-14 Score=78.33 Aligned_cols=46 Identities=67% Similarity=1.044 Sum_probs=43.7
Q ss_pred ccCCCCCCCCcCeEEEEEEeCCCcceEEEEEeCcCCceEEEEEEcC
Q psy6739 2 LTSIPPAPRGVPQIEVTFDIDANGILNVTAIEKSTGKENKITITND 47 (56)
Q Consensus 2 l~~ip~~p~g~~~i~V~f~~d~nGil~V~a~~~~~~~~~~~~i~~~ 47 (56)
|.++||.|+|.++|+|+|.||.||+|+|+|++..+|+...++|..+
T Consensus 87 l~gipp~p~G~~~IeVtf~iD~nGiL~V~a~d~~tg~~~~i~i~~~ 132 (135)
T 1q5l_A 87 LDGINPAPRGMPQIEVTFDIDADGILHVSAKDKNSGKEQKITIKAS 132 (135)
T ss_dssp CCCCCSCCSSSCCEEEEEEECTTSEEEEEEEETTTCCEEEEEEECS
T ss_pred EeCCCCCCCceeEEEEEEEECCCCEEEEEEEECCCCCEEEEEEecC
Confidence 6789999999999999999999999999999999999999999865
No 9
>4b9q_A Chaperone protein DNAK; HET: ATP; 2.40A {Escherichia coli} PDB: 2kho_A 1dkg_D
Probab=99.47 E-value=6.6e-14 Score=89.44 Aligned_cols=54 Identities=59% Similarity=0.953 Sum_probs=50.1
Q ss_pred ccCCCCCCCCcCeEEEEEEeCCCcceEEEEEeCcCCceEEEEEEcCCCCCCcccC
Q psy6739 2 LTSIPPAPRGVPQIEVTFDIDANGILNVTAIEKSTGKENKITITNDRGRLSKEDT 56 (56)
Q Consensus 2 l~~ip~~p~g~~~i~V~f~~d~nGil~V~a~~~~~~~~~~~~i~~~~~~ls~~ei 56 (56)
|.||||.|+|.++|+|+|.||.||+|+|+|.+..+|+...++|... +.||++||
T Consensus 459 l~~i~~~~~g~~~i~v~f~id~~gil~v~a~~~~tg~~~~i~i~~~-~~ls~~ei 512 (605)
T 4b9q_A 459 LDGINPAPRGMPQIEVTFDIDADGILHVSAKDKNSGKEQKITIKAS-SGLNEDEI 512 (605)
T ss_dssp EECCCCCSTTCCCEEEEEEECTTSCEEEEEEETTTCCEECCEEESC-CSCCHHHH
T ss_pred EeCCCCCcCCCceEEEEEEEcCCcEEEEEEEecCCCcEEEEEecCC-CCCCHHHH
Confidence 6789999999999999999999999999999999999999999876 56999875
No 10
>1yuw_A Heat shock cognate 71 kDa protein; chaperone; 2.60A {Bos taurus} SCOP: b.130.1.1 c.55.1.1 c.55.1.1 PDB: 3c7n_B* 2v7z_A*
Probab=99.41 E-value=4.1e-13 Score=85.07 Aligned_cols=55 Identities=89% Similarity=1.293 Sum_probs=50.7
Q ss_pred ccCCCCCCCCcCeEEEEEEeCCCcceEEEEEeCcCCceEEEEEEcCCCCCCcccC
Q psy6739 2 LTSIPPAPRGVPQIEVTFDIDANGILNVTAIEKSTGKENKITITNDRGRLSKEDT 56 (56)
Q Consensus 2 l~~ip~~p~g~~~i~V~f~~d~nGil~V~a~~~~~~~~~~~~i~~~~~~ls~~ei 56 (56)
|.|+||.|+|.++|+|+|.+|.||+|+|+|.+..+|+...+++....+.||++||
T Consensus 461 l~~i~~~~~g~~~i~v~f~id~~gil~v~a~~~~tg~~~~~~i~~~~~~ls~~~i 515 (554)
T 1yuw_A 461 LTGIPPAPRGVPQIEVTFDIDANGILNVSAVDKSTGKENKITITNDKGRLSKEDI 515 (554)
T ss_dssp EECCCCCSTTCCCEEEEEEECTTCCEEEEEEETTTCCEEEEEECCCSSCSCHHHH
T ss_pred EeCCCCCcccccEEEEEEEEccCceEEEEEEeccCCCceeEEEecCCCCCCHHHH
Confidence 6789999999999999999999999999999999999999999877677998874
No 11
>2v7y_A Chaperone protein DNAK; HSP70, heat shock protein, ATPase, domain rearrangement; HET: ADP; 2.37A {Geobacillus kaustophilus HTA426}
Probab=99.38 E-value=9.3e-13 Score=82.58 Aligned_cols=54 Identities=65% Similarity=0.952 Sum_probs=49.9
Q ss_pred ccCCCCCCCCcCeEEEEEEeCCCcceEEEEEeCcCCceEEEEEEcCCCCCCcccC
Q psy6739 2 LTSIPPAPRGVPQIEVTFDIDANGILNVTAIEKSTGKENKITITNDRGRLSKEDT 56 (56)
Q Consensus 2 l~~ip~~p~g~~~i~V~f~~d~nGil~V~a~~~~~~~~~~~~i~~~~~~ls~~ei 56 (56)
|.++||.|+|.++|+|+|.+|.||+|+|+|.+..+|+...++|... +.||++||
T Consensus 428 l~~i~~~~~g~~~i~v~f~id~~gil~v~a~~~~~g~~~~~~i~~~-~~l~~~~i 481 (509)
T 2v7y_A 428 LTGIPPAPRGVPQIEVTFDIDANGIVHVRAKDLGTNKEQSITIKSS-SGLSEEEI 481 (509)
T ss_dssp EECCCCCCTTCSCEEEEEEECTTSCEEEEEEETTTCCEEEEEECSS-CSCCSHHH
T ss_pred EeCCCCCCCcccEEEEEEEEcCCceEEEEEEEcCCCcEEEEEEEec-CCCCHHHH
Confidence 5789999999999999999999999999999999999999999876 67998874
No 12
>2kho_A Heat shock protein 70; molecular chaperone, HSP70, peptide binding, protein folding, acetylation, ATP-binding, cell inner membrane; NMR {Escherichia coli}
Probab=99.38 E-value=8.4e-13 Score=84.37 Aligned_cols=54 Identities=59% Similarity=0.953 Sum_probs=49.9
Q ss_pred ccCCCCCCCCcCeEEEEEEeCCCcceEEEEEeCcCCceEEEEEEcCCCCCCcccC
Q psy6739 2 LTSIPPAPRGVPQIEVTFDIDANGILNVTAIEKSTGKENKITITNDRGRLSKEDT 56 (56)
Q Consensus 2 l~~ip~~p~g~~~i~V~f~~d~nGil~V~a~~~~~~~~~~~~i~~~~~~ls~~ei 56 (56)
|.+|||.|+|.++|+|+|.+|.||+|+|+|.+..+|+...++|... +.||++||
T Consensus 459 l~~i~~~~~g~~~i~v~f~id~~gil~v~a~~~~tg~~~~i~i~~~-~~ls~~~i 512 (605)
T 2kho_A 459 LDGINPAPRGMPQIEVTFDIDADGILHVSAKDKNSGKEQKITIKAS-SGLNEDEI 512 (605)
T ss_dssp EECCCSCCTTCSCEEEEEEECTTSCEEEEEEETTTCCEEEEEECTT-SSCCHHHH
T ss_pred ecCCCCCCCCCcEEEEEEEEcCCCceeEEEEEcCCCceeecccccc-cCCCHHHH
Confidence 5789999999999999999999999999999999999999999876 77998864
No 13
>3d2f_A Heat shock protein homolog SSE1; nucleotide exchange factor, protein folding, ATP-binding, Ca binding, chaperone, nucleotide-binding, phosphoprotein; HET: ATP; 2.30A {Saccharomyces cerevisiae} PDB: 3d2e_A* 3c7n_A* 2qxl_A*
Probab=99.19 E-value=2.2e-11 Score=78.86 Aligned_cols=55 Identities=15% Similarity=0.250 Sum_probs=47.3
Q ss_pred ccCCCCCCCCcC-eEEEEEEeCCCcceEEEEE----------eCcCCceEEEEEEcCCCCCCcccC
Q psy6739 2 LTSIPPAPRGVP-QIEVTFDIDANGILNVTAI----------EKSTGKENKITITNDRGRLSKEDT 56 (56)
Q Consensus 2 l~~ip~~p~g~~-~i~V~f~~d~nGil~V~a~----------~~~~~~~~~~~i~~~~~~ls~~ei 56 (56)
|.||||.|+|.+ +|+|+|.+|.||+|+|+|. +..+|+...++|....+.||++||
T Consensus 464 l~gi~~~~~g~~~~i~v~f~id~~Gil~V~a~~~~~~~~~~~~~~t~~~~~i~i~~~~~~ls~~ei 529 (675)
T 3d2f_A 464 ITGVQLPEGQDSVPVKLKLRCDPSGLHTIEEAYTIEDIEAGSDTKTVKKDDLTIVAHTFGLDAKKL 529 (675)
T ss_dssp EECCCCCSSCSCEEEEEEEEECTTSCEEEEEEEEECC------CCCCEEEECEEEEECSSCCHHHH
T ss_pred ecCcCCCCCCCcceEEEEEEEcCCCcEEEEEEEEeecccccccccCcceeeEEEecCCCCCCHHHH
Confidence 678999999984 8999999999999999995 688999999999876557998874
No 14
>3q9p_A Heat shock protein beta-1; alpha-crystallin domain, chaperone, charcot-marie-tooth DISE neuronopathy, IG-like fold, stress response; 2.00A {Homo sapiens} PDB: 3q9q_A
Probab=76.54 E-value=1.4 Score=21.31 Aligned_cols=17 Identities=29% Similarity=0.440 Sum_probs=12.6
Q ss_pred EEEEEeCCCcceEEEEE
Q psy6739 16 EVTFDIDANGILNVTAI 32 (56)
Q Consensus 16 ~V~f~~d~nGil~V~a~ 32 (56)
.|+-.|..||+|+|++-
T Consensus 66 ~i~A~~~~~GvL~I~lP 82 (85)
T 3q9p_A 66 QVSSSLSPEGTLTVEAP 82 (85)
T ss_dssp GCEEEECTTSEEEEEEE
T ss_pred HcEEEECCCCEEEEEEE
Confidence 35666678999999864
No 15
>2hc5_A ORF 99, hypothetical protein YVYC; NESG, GFT-PSI, protein structure initiative, northeast structural genomics consortium, alpha-beta, FLAG; NMR {Bacillus subtilis} SCOP: d.352.1.1
Probab=73.69 E-value=3.4 Score=21.58 Aligned_cols=25 Identities=24% Similarity=0.417 Sum_probs=21.7
Q ss_pred EEEEEEeCCC-cceEEEEEeCcCCce
Q psy6739 15 IEVTFDIDAN-GILNVTAIEKSTGKE 39 (56)
Q Consensus 15 i~V~f~~d~n-Gil~V~a~~~~~~~~ 39 (56)
-.+.|.||.+ |.+.|.+.|..||..
T Consensus 56 ~~L~F~vdee~~~~vVkVvD~~TgEV 81 (117)
T 2hc5_A 56 VHLKFELHDKLNEYYVKVIEDSTNEV 81 (117)
T ss_dssp CCEEEEEEEETTEEEEEEEETTTTEE
T ss_pred CceEEEEecCCCcEEEEEEECCCCcE
Confidence 4689999965 889999999999986
No 16
>3l1e_A Alpha-crystallin A chain; lens transparency, polydispersity, protein aggregation, CRYS eye lens protein, chaperone; 1.15A {Bos taurus} PDB: 3l1f_A 3n3e_A
Probab=73.43 E-value=1.2 Score=22.42 Aligned_cols=20 Identities=15% Similarity=0.418 Sum_probs=14.5
Q ss_pred EEEEeCCCcceEEEEEeCcC
Q psy6739 17 VTFDIDANGILNVTAIEKST 36 (56)
Q Consensus 17 V~f~~d~nGil~V~a~~~~~ 36 (56)
++-.|+.||+|+|++--...
T Consensus 72 i~A~~s~~GvL~I~~PK~~~ 91 (106)
T 3l1e_A 72 LSCSLSADGMLTFSGPKIPS 91 (106)
T ss_dssp CEEEECTTSEEEEEEEBCCC
T ss_pred cEEEECCCCEEEEEEEccCc
Confidence 45566789999999865443
No 17
>1u07_A TONB protein; beta-hairpin, protein transport; 1.13A {Escherichia coli} SCOP: d.212.1.2 PDB: 2gsk_B* 1ihr_A 1qxx_A
Probab=72.20 E-value=4.1 Score=19.57 Aligned_cols=15 Identities=33% Similarity=0.800 Sum_probs=12.7
Q ss_pred eEEEEEEeCCCcceE
Q psy6739 14 QIEVTFDIDANGILN 28 (56)
Q Consensus 14 ~i~V~f~~d~nGil~ 28 (56)
.+.|.|.+|.||.+.
T Consensus 26 ~V~v~~~i~~~G~v~ 40 (90)
T 1u07_A 26 QVKVKFDVTPDGRVD 40 (90)
T ss_dssp EEEEEEEECTTSCEE
T ss_pred EEEEEEEECCCCCEE
Confidence 588999999999864
No 18
>2wj5_A Heat shock protein beta-6; chaperone, disulfide bond, stress response; 1.12A {Rattus norvegicus}
Probab=71.83 E-value=1.6 Score=21.73 Aligned_cols=22 Identities=27% Similarity=0.415 Sum_probs=15.1
Q ss_pred EEEEeCCCcceEEEEEeCcCCc
Q psy6739 17 VTFDIDANGILNVTAIEKSTGK 38 (56)
Q Consensus 17 V~f~~d~nGil~V~a~~~~~~~ 38 (56)
++-.|+.||+|+|++--....+
T Consensus 71 i~A~~s~nGvL~I~lPK~~~~~ 92 (101)
T 2wj5_A 71 VTSALSPEGVLSIQATPASAQA 92 (101)
T ss_dssp CEEEECTTSEEEEEECBCCCCC
T ss_pred CEEEECCCCEEEEEEECCCcCC
Confidence 4556668999999885544333
No 19
>2y1y_A Alpha-crystallin B chain,; small heat shock protein, chaperone, stress protein, eye LEN protein, cataract; HET: MSE; 2.00A {Homo sapiens} PDB: 2y22_A 2wj7_A 3l1g_A 2y1z_A
Probab=67.44 E-value=4 Score=19.74 Aligned_cols=16 Identities=25% Similarity=0.534 Sum_probs=11.9
Q ss_pred EEEEeCCCcceEEEEE
Q psy6739 17 VTFDIDANGILNVTAI 32 (56)
Q Consensus 17 V~f~~d~nGil~V~a~ 32 (56)
++-.|+.||+|+|++.
T Consensus 66 i~A~~~~~GvL~I~~p 81 (90)
T 2y1y_A 66 ITSSMSSDGVLTVNGP 81 (90)
T ss_dssp CEEEECTTSEEEEEEC
T ss_pred cEEEECCCCEEEEEEE
Confidence 4555668999999874
No 20
>2k9k_A TONB2; metal transport; NMR {Listonella anguillarum}
Probab=65.26 E-value=9.5 Score=18.76 Aligned_cols=15 Identities=27% Similarity=0.481 Sum_probs=12.7
Q ss_pred eEEEEEEeCCCcceE
Q psy6739 14 QIEVTFDIDANGILN 28 (56)
Q Consensus 14 ~i~V~f~~d~nGil~ 28 (56)
.+.|.|.+|.+|.+.
T Consensus 41 ~V~v~f~I~~~G~v~ 55 (106)
T 2k9k_A 41 FVTLSFTIDTTGKAV 55 (106)
T ss_dssp EEEEEEEEETTTEEE
T ss_pred EEEEEEEECCCCcEE
Confidence 588999999999864
No 21
>2klr_A Alpha-crystallin B chain; protein, dimer, oligomer, heterogeneity, intermolecular INTE chaperone, SHSP, human, small heat-shock protein, cataract; NMR {Homo sapiens} PDB: 2ygd_A
Probab=64.06 E-value=4 Score=22.50 Aligned_cols=30 Identities=30% Similarity=0.489 Sum_probs=14.0
Q ss_pred EEEEeCCCcceEEEEEeCcCCc-eEEEEEEc
Q psy6739 17 VTFDIDANGILNVTAIEKSTGK-ENKITITN 46 (56)
Q Consensus 17 V~f~~d~nGil~V~a~~~~~~~-~~~~~i~~ 46 (56)
|+-.|..||+|+|++--..... .+.+.|..
T Consensus 133 i~A~~s~dGvL~I~lPK~~~~~~~r~I~I~~ 163 (175)
T 2klr_A 133 ITSSLSSDGVLTVNGPRKQVSGPERTIPITR 163 (175)
T ss_dssp CEEEECTTSCEEEEEECC-------------
T ss_pred eEEEEcCCCEEEEEEECCCCCCCCeEEEEec
Confidence 4556678999999986544332 35566543
No 22
>1lr0_A TOLA protein; domain-swapping, TONB, protein transport; 1.91A {Pseudomonas aeruginosa} SCOP: d.212.1.1
Probab=61.40 E-value=16 Score=19.05 Aligned_cols=16 Identities=19% Similarity=0.430 Sum_probs=13.3
Q ss_pred CeEEEEEEeCCCcceE
Q psy6739 13 PQIEVTFDIDANGILN 28 (56)
Q Consensus 13 ~~i~V~f~~d~nGil~ 28 (56)
..+.|.|.++.+|.+.
T Consensus 52 ~~~~V~v~l~~dG~v~ 67 (129)
T 1lr0_A 52 MSVEVLIEMLPDGTIT 67 (129)
T ss_dssp CCEEEEEEECTTSBEE
T ss_pred CEEEEEEEECCCCCEE
Confidence 3588999999999864
No 23
>4eld_A MJ16.5-P1, small heat shock protein HSP16.5; chaperone; 2.70A {Methanocaldococcus jannaschii} PDB: 1shs_A
Probab=61.11 E-value=2.2 Score=22.94 Aligned_cols=16 Identities=25% Similarity=0.380 Sum_probs=11.1
Q ss_pred CCcceEEEEEeCcCCc
Q psy6739 23 ANGILNVTAIEKSTGK 38 (56)
Q Consensus 23 ~nGil~V~a~~~~~~~ 38 (56)
.||+|+|++--....+
T Consensus 139 ~nGvL~I~lpK~~~~~ 154 (161)
T 4eld_A 139 ENGVLSVILPKAESSI 154 (161)
T ss_dssp ETTEEEEEEEBCGGGS
T ss_pred ECCEEEEEEEcCCCCC
Confidence 3899999986544433
No 24
>1wvl_A DNA-binding proteins 7A/7B/7D, GCN4; leucine zipper, protein engineering, synchrotron radiation, thermophIle, X-RAY crystallography; 2.60A {Sulfolobus acidocaldarius} SCOP: b.34.13.1
Probab=60.21 E-value=2.9 Score=20.01 Aligned_cols=12 Identities=42% Similarity=0.573 Sum_probs=9.8
Q ss_pred EEEEEeCCCcce
Q psy6739 16 EVTFDIDANGIL 27 (56)
Q Consensus 16 ~V~f~~d~nGil 27 (56)
-|.|.||.||.-
T Consensus 29 mvsftyddngkt 40 (80)
T 1wvl_A 29 MVSFTYDDNGKT 40 (80)
T ss_dssp EEEEEEEETTEE
T ss_pred eEEEEEcCCCcc
Confidence 378999999864
No 25
>3iez_A RAS GTPase-activating-like protein iqgap2; structural genomics consortium, SGC, alternative splicing, calmodulin-binding, phosphoprotein; 1.50A {Homo sapiens} PDB: 4eza_A
Probab=57.13 E-value=13 Score=19.29 Aligned_cols=32 Identities=9% Similarity=0.140 Sum_probs=22.7
Q ss_pred ccCCCCCCCCcCeEEEEEE-eCCCcceEEEEEeCc
Q psy6739 2 LTSIPPAPRGVPQIEVTFD-IDANGILNVTAIEKS 35 (56)
Q Consensus 2 l~~ip~~p~g~~~i~V~f~-~d~nGil~V~a~~~~ 35 (56)
+.++|+...+ +|.++|+ .|.-|+.+|++....
T Consensus 38 i~g~~~~~~~--~i~f~IsS~~e~GvF~Ie~~~~g 70 (114)
T 3iez_A 38 IDDLQTNQFK--NVTFDIIATEDVGIFDVRSKFLG 70 (114)
T ss_dssp ETTCCGGGGG--GEEEEEEECSSTTEEEEEEEETT
T ss_pred ccCCChhhcc--eEEEEEEeCCCCeEEEEEEEECC
Confidence 4567654444 4777776 599999999998743
No 26
>2y7s_A Factor H binding protein; immune system, antigen, epitope, antibody, structure-based D vaccine; 1.90A {Neisseria meningitidis serogroup B} PDB: 2kc0_A 2w80_C 2w81_C 3kvd_D 2kdy_A 1ys5_A
Probab=56.01 E-value=8.3 Score=22.84 Aligned_cols=28 Identities=14% Similarity=0.319 Sum_probs=23.1
Q ss_pred CCCCCCCCcCeEEEEEEeCCCcceEEEE
Q psy6739 4 SIPPAPRGVPQIEVTFDIDANGILNVTA 31 (56)
Q Consensus 4 ~ip~~p~g~~~i~V~f~~d~nGil~V~a 31 (56)
.+.|.|+|...+.+.=+++.|+.|++++
T Consensus 17 p~~~~~~g~~~l~~~~s~~~n~~~~l~~ 44 (256)
T 2y7s_A 17 PLDHKDKGLQSLTLDQSVRKNEKLKLAA 44 (256)
T ss_dssp CCCTTSCSCCCEECSSSSCTTCEEEEEE
T ss_pred CCCCCcccccEEEEecccCCCCeEEEEe
Confidence 4568899987788877888999998887
No 27
>2xiw_A DNA-binding protein 7D; HET: MSE; 1.50A {Sulfolobus acidocaldarius}
Probab=55.61 E-value=3.8 Score=19.60 Aligned_cols=14 Identities=29% Similarity=0.415 Sum_probs=10.6
Q ss_pred EEEEEeCCCcceEE
Q psy6739 16 EVTFDIDANGILNV 29 (56)
Q Consensus 16 ~V~f~~d~nGil~V 29 (56)
-|.|.||.||.---
T Consensus 40 mvsFtYddnGKtGr 53 (79)
T 2xiw_A 40 NVKFLYNDNGKYGA 53 (79)
T ss_dssp EEEEEEEETTEEEE
T ss_pred eeEEEEcCCCcccC
Confidence 38899999987543
No 28
>3isu_A RAS GTPase-activating-like protein iqgap3; structural genomics, structural genomics consortium (SGC), RGC domain, calmodulin-binding; 1.88A {Homo sapiens}
Probab=55.15 E-value=10 Score=20.00 Aligned_cols=31 Identities=16% Similarity=0.189 Sum_probs=22.1
Q ss_pred ccCCCCCCCCcCeEEEEEE-eCCCcceEEEEEeC
Q psy6739 2 LTSIPPAPRGVPQIEVTFD-IDANGILNVTAIEK 34 (56)
Q Consensus 2 l~~ip~~p~g~~~i~V~f~-~d~nGil~V~a~~~ 34 (56)
+.++|+.... .+.++|+ -|.-|+.+|++...
T Consensus 41 i~g~~~~~~~--~v~f~Isss~e~GvF~I~~~~~ 72 (121)
T 3isu_A 41 IEDLPASHFR--NVIFDITPGDEAGKFEVNAKFL 72 (121)
T ss_dssp ETTCCGGGGG--GEEEEEEECSSTTEEEEEEEET
T ss_pred ecCCChhccc--cEEEEEEeCCCCeEEEEEEEeC
Confidence 3456654433 4777777 89999999999874
No 29
>2grx_C Protein TONB; beta barrel, outer membrane, heterocomplex, inter-protein beta sheet, protein-protein, metal transport; HET: GCN KDO GMH FTT DAO MYR FCI; 3.30A {Escherichia coli} SCOP: d.212.1.2 PDB: 1xx3_A
Probab=50.28 E-value=18 Score=20.94 Aligned_cols=15 Identities=33% Similarity=0.800 Sum_probs=12.1
Q ss_pred eEEEEEEeCCCcceE
Q psy6739 14 QIEVTFDIDANGILN 28 (56)
Q Consensus 14 ~i~V~f~~d~nGil~ 28 (56)
.+.|.|.+|.||.+.
T Consensus 165 ~V~V~f~Id~dG~V~ 179 (229)
T 2grx_C 165 QVKVKFDVTPDGRVD 179 (229)
T ss_dssp EECEEEECCTTSCCE
T ss_pred EEEEEEEECCCCCEE
Confidence 478899999999753
No 30
>2fp7_A Serine protease subunit NS2B; flavivirus, NS3 protease, NS2B cofactor; HET: OAR; 1.68A {West nile virus} PDB: 3e90_A*
Probab=48.78 E-value=19 Score=16.27 Aligned_cols=18 Identities=17% Similarity=0.492 Sum_probs=13.2
Q ss_pred CcCeEEEEEEeCCCcceEEE
Q psy6739 11 GVPQIEVTFDIDANGILNVT 30 (56)
Q Consensus 11 g~~~i~V~f~~d~nGil~V~ 30 (56)
++++++|+ +|.+|-++..
T Consensus 28 ~s~rldV~--~d~~G~f~l~ 45 (54)
T 2fp7_A 28 SSERVDVR--LDDDGNFQLM 45 (54)
T ss_dssp CCCEEEEE--ECTTSCEEEC
T ss_pred CcceEEEE--ECCCCCEEEc
Confidence 44567777 9999998654
No 31
>3rdl_A Protein kinase C alpha type; protein kinase PKC, transferase; 1.50A {Rattus norvegicus} PDB: 3gpe_A 3rdj_A 3twy_A 1dsy_A* 4dnl_A* 2uzp_A*
Probab=47.99 E-value=25 Score=17.39 Aligned_cols=20 Identities=30% Similarity=0.501 Sum_probs=14.8
Q ss_pred CCCcCeEEEEEEeCCCcceEEEE
Q psy6739 9 PRGVPQIEVTFDIDANGILNVTA 31 (56)
Q Consensus 9 p~g~~~i~V~f~~d~nGil~V~a 31 (56)
+.| +|.+++.| ..|.|.|.+
T Consensus 3 ~~G--~l~~~l~~-~~~~L~v~v 22 (137)
T 3rdl_A 3 KRG--RIYLKAEV-TDEKLHVTV 22 (137)
T ss_dssp CCC--EEEEEEEE-ETTEEEEEE
T ss_pred cce--EEEEEEEE-cCCEEEEEE
Confidence 455 57888888 678888875
No 32
>2k6w_A Putative uncharacterized protein TTHA1943; PCUA, copper transfer protein, metal transport; NMR {Thermus thermophilus} PDB: 2k6y_A 2k6z_A 2k70_A
Probab=47.34 E-value=29 Score=17.91 Aligned_cols=26 Identities=19% Similarity=0.312 Sum_probs=19.8
Q ss_pred CCCCCcCeEEEEEEeCCCcceEEEEEe
Q psy6739 7 PAPRGVPQIEVTFDIDANGILNVTAIE 33 (56)
Q Consensus 7 ~~p~g~~~i~V~f~~d~nGil~V~a~~ 33 (56)
|...|+ .+.++|..+..|.++|.+.-
T Consensus 92 ~l~~G~-~v~ltL~Fe~~~~v~v~~~V 117 (120)
T 2k6w_A 92 PLKAGE-EVELDLLFAGGKVLKVVLPV 117 (120)
T ss_dssp CBCTTC-EEEEEEEETTTEEEEEEEEE
T ss_pred CCCCCC-EEEEEEEECCCCeEEEEEEE
Confidence 345565 59999999988988887754
No 33
>2ijo_A Polyprotein; WEST NIle virus, protease, aprotinin, BPTI, NS2B, NS3, flavivirus, serine protease; 2.30A {West nile virus}
Probab=47.13 E-value=21 Score=16.36 Aligned_cols=18 Identities=17% Similarity=0.492 Sum_probs=13.2
Q ss_pred CcCeEEEEEEeCCCcceEEE
Q psy6739 11 GVPQIEVTFDIDANGILNVT 30 (56)
Q Consensus 11 g~~~i~V~f~~d~nGil~V~ 30 (56)
++++++|+ +|.+|-+++.
T Consensus 24 ~s~rldV~--~d~~G~f~L~ 41 (58)
T 2ijo_A 24 SSERVDVR--LDDDGNFQLM 41 (58)
T ss_dssp CCCEEEEE--ECTTSCEEET
T ss_pred CcceEEEE--ECCCCCEEEc
Confidence 44567777 9999999654
No 34
>1op4_A Neural-cadherin; beta sandwich, cadherin-like domain, cell adhesion; NMR {Mus musculus} SCOP: b.1.6.1
Probab=46.78 E-value=35 Score=18.67 Aligned_cols=27 Identities=22% Similarity=0.462 Sum_probs=19.5
Q ss_pred EEEeCCCcceEE---------------EEEeCcCCceEEEEE
Q psy6739 18 TFDIDANGILNV---------------TAIEKSTGKENKITI 44 (56)
Q Consensus 18 ~f~~d~nGil~V---------------~a~~~~~~~~~~~~i 44 (56)
.|.++.||.+.+ .|.|..++....+.+
T Consensus 78 dFkV~~DGtVya~r~v~L~~~~~~F~V~a~D~~t~~~~~i~V 119 (159)
T 1op4_A 78 DFKVDEDGTVYAVRSFPLTAEQAKFLIYAQDKETQEKWQVAV 119 (159)
T ss_dssp EEEEETTTEEEEESCCSCSSSCEEEEEEEEETTTTEEEEEEE
T ss_pred CeEEeCCCcEEEecceeecCCCcEEEEEEEcCCCceEEEEEE
Confidence 789999998874 456666666666655
No 35
>3sbc_A Peroxiredoxin TSA1; alpha-beta fold, peroxidase, cytosol, oxidoreductase; 2.80A {Saccharomyces cerevisiae}
Probab=46.22 E-value=32 Score=19.51 Aligned_cols=26 Identities=23% Similarity=0.480 Sum_probs=19.2
Q ss_pred eEEEEEEeCCCcceE-EEEEeCcCCce
Q psy6739 14 QIEVTFDIDANGILN-VTAIEKSTGKE 39 (56)
Q Consensus 14 ~i~V~f~~d~nGil~-V~a~~~~~~~~ 39 (56)
..+-+|-||.+|+|. +...+...|+.
T Consensus 142 ~~R~tFiID~~G~Ir~~~v~~~~~grn 168 (216)
T 3sbc_A 142 ALRGLFIIDPKGVIRHITINDLPVGRN 168 (216)
T ss_dssp ECEEEEEECTTSBEEEEEEECTTBCCC
T ss_pred eeeEEEEECCCCeEEEEEEcCCCCCCC
Confidence 378999999999985 45565666653
No 36
>2ohd_A Probable molybdenum cofactor biosynthesis protein; alpha + beta, biosynthetic protein; 2.20A {Sulfolobus tokodaii str}
Probab=45.20 E-value=37 Score=18.55 Aligned_cols=21 Identities=19% Similarity=0.446 Sum_probs=14.3
Q ss_pred cCeEEEEEEeCCCcceEEEEEe
Q psy6739 12 VPQIEVTFDIDANGILNVTAIE 33 (56)
Q Consensus 12 ~~~i~V~f~~d~nGil~V~a~~ 33 (56)
...++|.|.++.+++ +++++.
T Consensus 72 lt~v~v~f~~~~~~v-~i~~~v 92 (151)
T 2ohd_A 72 LEFVDVEIKIEEEGL-RVISTV 92 (151)
T ss_dssp CCEEEEEEEEETTEE-EEEEEE
T ss_pred ccEEEEEEEECCCEE-EEEEEE
Confidence 356999999998664 444433
No 37
>3ke6_A Protein RV1364C/MT1410; anti-sigma factor, anti-sigma factor antagonist, phosphatase serine kinase, ATPase, unknown function; 2.60A {Mycobacterium tuberculosis}
Probab=44.13 E-value=51 Score=19.90 Aligned_cols=27 Identities=19% Similarity=0.350 Sum_probs=20.8
Q ss_pred eEEEEEEeCCCcceEEEEEeCcCCceE
Q psy6739 14 QIEVTFDIDANGILNVTAIEKSTGKEN 40 (56)
Q Consensus 14 ~i~V~f~~d~nGil~V~a~~~~~~~~~ 40 (56)
.|.|++..+.++.|.|++.|...|...
T Consensus 321 ~i~v~~~~~~~~~l~i~V~D~G~g~~~ 347 (399)
T 3ke6_A 321 GIVVAAALAGDGNVRASVIDRGQWKDH 347 (399)
T ss_dssp CEEEEEEECTTSEEEEEEEESCBC---
T ss_pred eEEEEEEEcCCCEEEEEEEECCCCCCC
Confidence 588999998888899999998877643
No 38
>2iih_A Molybdenum cofactor biosynthesis protein C; MOAC, molybdenum cofactor (MOCO), MOCO biosynthesis, structu genomics, NPPSFA; 1.75A {Thermus thermophilus} PDB: 2ide_A 3jqj_A 3jqk_A 3jqm_A*
Probab=43.94 E-value=40 Score=18.53 Aligned_cols=25 Identities=16% Similarity=0.258 Sum_probs=16.8
Q ss_pred cCeEEEEEEeCC-CcceEEEEEeCcC
Q psy6739 12 VPQIEVTFDIDA-NGILNVTAIEKST 36 (56)
Q Consensus 12 ~~~i~V~f~~d~-nGil~V~a~~~~~ 36 (56)
...++|.|.++. +.-++++++...+
T Consensus 79 lt~v~v~~~~~~~~~~v~i~~~vkt~ 104 (157)
T 2iih_A 79 LTGVEVRVELLKAEKRVRIEATVKTK 104 (157)
T ss_dssp CSEEEEEEEEETTTTEEEEEEEEEEE
T ss_pred cceEEEEEEEcCCCCEEEEEEEEEEE
Confidence 356999999984 4557766655443
No 39
>1x0h_A P195, RAS GTPase-activating-like protein iqgap1; cell adhesion, beta-sandwich, protein-protein interaction, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: d.332.1.1
Probab=42.01 E-value=28 Score=17.87 Aligned_cols=23 Identities=13% Similarity=0.096 Sum_probs=18.6
Q ss_pred CeEEEEEE-eCCCcceEEEEEeCc
Q psy6739 13 PQIEVTFD-IDANGILNVTAIEKS 35 (56)
Q Consensus 13 ~~i~V~f~-~d~nGil~V~a~~~~ 35 (56)
.+|.++|+ -|.-|+.+|.+....
T Consensus 35 ~~i~f~IS~s~e~GvF~I~~~~~g 58 (112)
T 1x0h_A 35 KNVIFEISPTEEVGDFEVKAKFMG 58 (112)
T ss_dssp GGCEEEEECCSSSSCEEEEEESSC
T ss_pred CcEEEEEEcCCCCeEEEEEEEeCC
Confidence 36888888 778999999998744
No 40
>2ekn_A Probable molybdenum cofactor biosynthesis protein; structural genomic NPPSFA, national project on protein structural and function analyses; HET: FLC; 2.05A {Pyrococcus horikoshii}
Probab=41.81 E-value=40 Score=18.55 Aligned_cols=21 Identities=24% Similarity=0.479 Sum_probs=14.3
Q ss_pred cCeEEEEEEeCCCcceEEEEEe
Q psy6739 12 VPQIEVTFDIDANGILNVTAIE 33 (56)
Q Consensus 12 ~~~i~V~f~~d~nGil~V~a~~ 33 (56)
...++|.|.++.++ ++++++.
T Consensus 81 lt~v~v~f~~~~~~-v~i~~~v 101 (159)
T 2ekn_A 81 ITGVDITFDFGEDY-IEVTCEV 101 (159)
T ss_dssp EEEEEEEEEECSSE-EEEEEEE
T ss_pred ceEEEEEEEECCCE-EEEEEEE
Confidence 34699999999866 4444443
No 41
>1h8g_A Major autolysin; choline-binding domain, cell WALL attachment; 2.4A {Streptococcus pneumoniae} SCOP: b.109.1.1
Probab=41.11 E-value=17 Score=17.73 Aligned_cols=12 Identities=25% Similarity=0.869 Sum_probs=9.2
Q ss_pred EEEeCCCcceEE
Q psy6739 18 TFDIDANGILNV 29 (56)
Q Consensus 18 ~f~~d~nGil~V 29 (56)
.+.+|.||.|+|
T Consensus 83 ~y~~~~dG~~~~ 94 (95)
T 1h8g_A 83 EFTVEPDGLITV 94 (95)
T ss_dssp GEEECTTSCEEE
T ss_pred EEEECCCeEEEe
Confidence 377888888876
No 42
>2bol_A TSP36, small heat shock protein; A-crystallin, molecular chaperone; 2.5A {Taenia saginata}
Probab=40.73 E-value=13 Score=22.34 Aligned_cols=20 Identities=15% Similarity=0.250 Sum_probs=15.2
Q ss_pred EEEEEeCCCcceEEEEEeCc
Q psy6739 16 EVTFDIDANGILNVTAIEKS 35 (56)
Q Consensus 16 ~V~f~~d~nGil~V~a~~~~ 35 (56)
.|+-.|..||+|+|++--..
T Consensus 170 ~i~A~~~~nGVL~I~lPK~~ 189 (314)
T 2bol_A 170 HIQATITTDDVLVIEAPVNE 189 (314)
T ss_dssp GCEEEECSSSEEEEEEEBSS
T ss_pred ccEEEEeCCCEEEEEEeccC
Confidence 35677788999999986543
No 43
>3gla_A Low molecular weight heat shock protein; HSPA, SHP, SHSP, high resolution, stress response, chaperone; 1.64A {Xanthomonas axonopodis PV} PDB: 3gt6_A 3guf_A
Probab=38.68 E-value=35 Score=16.38 Aligned_cols=16 Identities=25% Similarity=0.335 Sum_probs=10.7
Q ss_pred eEEEEEEeCCCcceEEEEE
Q psy6739 14 QIEVTFDIDANGILNVTAI 32 (56)
Q Consensus 14 ~i~V~f~~d~nGil~V~a~ 32 (56)
.|.-+|. ||+|+|++-
T Consensus 80 ~i~A~~~---~GvL~I~~p 95 (100)
T 3gla_A 80 GITAAGR---NGVLEIRIP 95 (100)
T ss_dssp SCEEEEE---TTEEEEEEE
T ss_pred HeEEEEe---CCEEEEEEe
Confidence 3555553 799988764
No 44
>1zps_A PRA-CH, phosphoribosyl-AMP cyclohydrolase; histidine biosynthesis; 1.70A {Methanothermobacterthermautotrophicus} SCOP: b.168.1.1
Probab=38.32 E-value=27 Score=18.84 Aligned_cols=30 Identities=13% Similarity=0.305 Sum_probs=23.5
Q ss_pred EEEEEEeCCCcceEEEEEeCcCCceEEEEE
Q psy6739 15 IEVTFDIDANGILNVTAIEKSTGKENKITI 44 (56)
Q Consensus 15 i~V~f~~d~nGil~V~a~~~~~~~~~~~~i 44 (56)
+...+.+|.+|++-+-+.+..+|...-+..
T Consensus 12 ~~~~~~~~~~GLipaIvQd~~tg~VLMlay 41 (138)
T 1zps_A 12 LNFRHNINGEDLIIAVAQDHETGEVLMVAY 41 (138)
T ss_dssp SCCCCCSSSCCCEEEEEEETTTCCEEEEEE
T ss_pred hhcccccCCCCcEEEEEEECCCCCEEEEEe
Confidence 444567888999999999999998765544
No 45
>1rh8_A Piccolo protein; beta-sandwich, metal binding protein; NMR {Rattus norvegicus} SCOP: b.7.1.2
Probab=38.10 E-value=39 Score=16.82 Aligned_cols=18 Identities=22% Similarity=0.431 Sum_probs=13.7
Q ss_pred eEEEEEEeCCCcceEEEEE
Q psy6739 14 QIEVTFDIDANGILNVTAI 32 (56)
Q Consensus 14 ~i~V~f~~d~nGil~V~a~ 32 (56)
+|.+.+.|+ .|.|+|.+.
T Consensus 8 ~i~~~l~y~-~~~L~V~v~ 25 (142)
T 1rh8_A 8 EIQLQINYD-LGNLIIHIL 25 (142)
T ss_dssp EEEEEEEEE-TTEEEEEEE
T ss_pred EEEEEEEEc-CCEEEEEEE
Confidence 588888888 688888743
No 46
>4gyx_A Type III collagen fragment in A HOST peptide STAB the cysteine knot; collagen triple helix, type III collagen cysteine knot, BLOO clotting; 1.49A {Homo sapiens}
Probab=37.98 E-value=13 Score=14.56 Aligned_cols=9 Identities=67% Similarity=1.468 Sum_probs=5.7
Q ss_pred CCCCCCcCe
Q psy6739 6 PPAPRGVPQ 14 (56)
Q Consensus 6 p~~p~g~~~ 14 (56)
||.|+|++-
T Consensus 5 ppgprgqpg 13 (31)
T 4gyx_A 5 PPGPRGQPG 13 (31)
T ss_dssp CCCCCCCCC
T ss_pred CCCCCCCCc
Confidence 567777653
No 47
>3fbk_A RGS3, RGP3, regulator of G-protein signaling 3; all beta-sheet fold, structural genomics, PSI-2, protein structure initiative; 2.00A {Homo sapiens} SCOP: b.7.1.0
Probab=37.57 E-value=38 Score=17.34 Aligned_cols=19 Identities=21% Similarity=0.345 Sum_probs=13.2
Q ss_pred eEEEEEEeC-CCcceEEEEE
Q psy6739 14 QIEVTFDID-ANGILNVTAI 32 (56)
Q Consensus 14 ~i~V~f~~d-~nGil~V~a~ 32 (56)
++.+.+.|+ ..|.|.|.+.
T Consensus 15 ~~~lsL~y~~~~~~L~V~v~ 34 (153)
T 3fbk_A 15 AGQLRLSIDAQDRVLLLHII 34 (153)
T ss_dssp CCEEEEEEEESSSEEEEEEE
T ss_pred EEEEEEEEECCCCEEEEEEE
Confidence 577777777 4588888753
No 48
>3mfb_A Uncharacterized protein; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; 2.20A {Erwinia carotovora}
Probab=37.16 E-value=52 Score=17.98 Aligned_cols=22 Identities=18% Similarity=0.283 Sum_probs=17.0
Q ss_pred eEEEEEEeCC-CcceEEEEEeCc
Q psy6739 14 QIEVTFDIDA-NGILNVTAIEKS 35 (56)
Q Consensus 14 ~i~V~f~~d~-nGil~V~a~~~~ 35 (56)
++++.+.-|. +|.+.|.+....
T Consensus 21 rVR~~~~~de~~G~~~v~gv~Tg 43 (157)
T 3mfb_A 21 RVRYQWMEDEETGRLKAVGYHTS 43 (157)
T ss_dssp SEEEEEEECTTTCCEEEEEEECC
T ss_pred cEEEEEEecCCCCcEEEEEEECC
Confidence 3666666785 999999998865
No 49
>3k6d_A T-cadherin; cell adhesion; 1.80A {Xenopus laevis} PDB: 2v37_A
Probab=37.02 E-value=38 Score=16.34 Aligned_cols=28 Identities=21% Similarity=0.478 Sum_probs=15.1
Q ss_pred EEeCCC-cceEEEE-EeCcCCceEEEEEEc
Q psy6739 19 FDIDAN-GILNVTA-IEKSTGKENKITITN 46 (56)
Q Consensus 19 f~~d~n-Gil~V~a-~~~~~~~~~~~~i~~ 46 (56)
|.+|.+ |.|.+.. .|.+......+.+..
T Consensus 50 F~Id~~tG~i~~~~~LDrE~~~~y~l~V~A 79 (99)
T 3k6d_A 50 FKINENSGEVSVTKALDREAIPSYQLQVET 79 (99)
T ss_dssp EEECTTTCEEEECSCCCTTTCCEEEEEEEE
T ss_pred EEEECCceEEEECcCCCcccCceEEEEEEE
Confidence 677765 7776652 334444444554443
No 50
>1dwm_A LUTI, linum usitatissinum trypsin inhibitor; serine proteinase inhibitor; NMR {Linum usitatissimum} SCOP: d.40.1.1
Probab=35.87 E-value=21 Score=16.59 Aligned_cols=13 Identities=15% Similarity=0.271 Sum_probs=9.1
Q ss_pred EEEEEEeCCCcce
Q psy6739 15 IEVTFDIDANGIL 27 (56)
Q Consensus 15 i~V~f~~d~nGil 27 (56)
=+|.+.+|.+|++
T Consensus 51 ~RV~v~vD~~g~V 63 (70)
T 1dwm_A 51 DRVWVIVNDHGVV 63 (70)
T ss_dssp TEEEEEECTTSBB
T ss_pred CeEEEEECCCCeE
Confidence 3577778877765
No 51
>1ekr_A Molybdenum cofactor biosynthesis protein C; MOAC, molybdenum cofactor (MOCO), MOCO biosynthesis, MOCO DE translation; 2.00A {Escherichia coli} SCOP: d.58.21.1 PDB: 1eks_A*
Probab=35.29 E-value=46 Score=18.35 Aligned_cols=23 Identities=9% Similarity=0.390 Sum_probs=14.8
Q ss_pred cCeEEEEEEeCC-CcceEEEEEeC
Q psy6739 12 VPQIEVTFDIDA-NGILNVTAIEK 34 (56)
Q Consensus 12 ~~~i~V~f~~d~-nGil~V~a~~~ 34 (56)
...++|.|.++. +.-++++++..
T Consensus 81 lt~v~v~~~~~~~~~~v~i~~~v~ 104 (161)
T 1ekr_A 81 LSKVEVNLQAEPEHNRVRIETLCR 104 (161)
T ss_dssp CSEEEEEEEEEGGGTEEEEEEEEE
T ss_pred cceEEEEEEEcCCCCEEEEEEEEE
Confidence 346899999983 33466665543
No 52
>1x9l_A CUI-DR1885; copper binding protein, solution ST holo-form, structural proteomics in europe, spine, structur genomics; NMR {Deinococcus radiodurans} SCOP: b.2.10.1 PDB: 2jqa_A
Probab=34.96 E-value=54 Score=17.52 Aligned_cols=27 Identities=30% Similarity=0.411 Sum_probs=20.5
Q ss_pred CCCCCcCeEEEEEEeCCCcceEEEEEeC
Q psy6739 7 PAPRGVPQIEVTFDIDANGILNVTAIEK 34 (56)
Q Consensus 7 ~~p~g~~~i~V~f~~d~nGil~V~a~~~ 34 (56)
|...|+ .+.++|..+..|.++|.+.-.
T Consensus 117 ~l~~G~-~v~lTL~Fe~~g~v~v~~~V~ 143 (149)
T 1x9l_A 117 PLKVGE-TVNITLKATDGRTLNVAATVK 143 (149)
T ss_dssp CCCTTE-EEEEEECBTTTCCEEEEEEEC
T ss_pred CCCCCC-EEEEEEEECCCCeEEEEEEEe
Confidence 345565 599999999889888887654
No 53
>1c8c_A DNA-binding protein 7A; protein-DNA interaction, protein stability, hyperthermophIle, achaeabacteria, X-RAY crystallography; 1.45A {Sulfolobus solfataricus} SCOP: b.34.13.1 PDB: 1bnz_A 1bbx_C* 1jic_A 1sso_A 1bf4_A* 2cvr_A 1b4o_A 1azp_A* 1azq_A* 1ca5_A 1ca6_A 1sap_A 1wd0_A 1wd1_A 1wtw_A 1wtx_A 1wtq_A 1wtp_A 1wtv_A 1wtr_A ...
Probab=34.35 E-value=16 Score=16.74 Aligned_cols=11 Identities=27% Similarity=0.582 Sum_probs=8.2
Q ss_pred EEEEeCC-Ccce
Q psy6739 17 VTFDIDA-NGIL 27 (56)
Q Consensus 17 V~f~~d~-nGil 27 (56)
|.|.||. ||.-
T Consensus 30 isftyddgngkt 41 (64)
T 1c8c_A 30 ISFTYDEGGGKT 41 (64)
T ss_dssp EEEEEECGGGCE
T ss_pred EEEEEecCCCcc
Confidence 7899987 6653
No 54
>3if4_A Integron cassette protein HFX_CASS5; integron cassette protein mobIle metagenome structural genomics PSI-2 protein structure initiative midwest center for structural genomics; HET: MSE; 2.18A {Unidentified}
Probab=34.27 E-value=35 Score=17.66 Aligned_cols=17 Identities=29% Similarity=0.542 Sum_probs=13.7
Q ss_pred EEEEEEeCCCcceEEEE
Q psy6739 15 IEVTFDIDANGILNVTA 31 (56)
Q Consensus 15 i~V~f~~d~nGil~V~a 31 (56)
.--..++|.+|.|+|..
T Consensus 26 ~ia~IEvd~~Grihv~p 42 (119)
T 3if4_A 26 FVAAIEIDGTGRIHVTP 42 (119)
T ss_dssp EEEEEEECTTSCEEEEE
T ss_pred HHHHeeeccCCcEEEee
Confidence 44567899999999976
No 55
>3u95_A Glycoside hydrolase, family 4; hydrolysis, cytosol; 2.00A {Thermotoga neapolitana} PDB: 1vjt_A*
Probab=34.20 E-value=27 Score=22.02 Aligned_cols=22 Identities=23% Similarity=0.425 Sum_probs=17.6
Q ss_pred CCCCCCCcCeEEEEEEeCCCcce
Q psy6739 5 IPPAPRGVPQIEVTFDIDANGIL 27 (56)
Q Consensus 5 ip~~p~g~~~i~V~f~~d~nGil 27 (56)
|+..|.... |+|...+|.||+-
T Consensus 371 I~nLP~Dav-VEVpc~Vd~~Gi~ 392 (477)
T 3u95_A 371 LKDFPDDLV-MELPVWVDSSGIH 392 (477)
T ss_dssp STTSCTTSE-EEEEEEEETTEEE
T ss_pred cCCCCCCcE-EEEEEEEcCCCcc
Confidence 566777765 9999999999963
No 56
>2omz_B Epithelial-cadherin; leucine-rich-repeat, nvasion protein, IG-like domain, adhesi protein, cell invasion-cell adhesion complex; 1.60A {Homo sapiens} SCOP: b.1.6.1 PDB: 2omt_B 2omu_B 2omv_B 1o6s_B 2omy_B 2omx_B 3ff8_A 3ff7_A 2omw_B
Probab=33.71 E-value=46 Score=16.26 Aligned_cols=28 Identities=21% Similarity=0.307 Sum_probs=15.3
Q ss_pred EEeCC-CcceEEE-EEeCcCCceEEEEEEc
Q psy6739 19 FDIDA-NGILNVT-AIEKSTGKENKITITN 46 (56)
Q Consensus 19 f~~d~-nGil~V~-a~~~~~~~~~~~~i~~ 46 (56)
|.+|. +|.|++. ..|.+......+.+..
T Consensus 55 F~Id~~tG~I~~~~~LDrE~~~~y~l~V~A 84 (105)
T 2omz_B 55 FIIERETGWLKVTEPLDRERIATYTLFSHA 84 (105)
T ss_dssp EEECTTTCEEEECSCCCTTTCCEEEEEEEE
T ss_pred EEEeCCCCEEEECccCCcCCCCeEEEEEEE
Confidence 77775 4777665 2334444455555543
No 57
>3imh_A Galactose-1-epimerase; structural genomics, PSI-2, protein ST initiative, NEW YORK SGX research center for structural GEN nysgxrc; 1.76A {Lactobacillus acidophilus}
Probab=32.66 E-value=51 Score=19.84 Aligned_cols=23 Identities=9% Similarity=0.159 Sum_probs=16.4
Q ss_pred cCeEEEEEEeCCCcceEEEEEeC
Q psy6739 12 VPQIEVTFDIDANGILNVTAIEK 34 (56)
Q Consensus 12 ~~~i~V~f~~d~nGil~V~a~~~ 34 (56)
...++|+|+++.++.|+|+.+..
T Consensus 141 ~~~~~vtY~L~~~~~L~i~~~a~ 163 (338)
T 3imh_A 141 NLKLHARYELDNENNLHYLLEAV 163 (338)
T ss_dssp CEEEEEEEEEETTSEEEEEEEEE
T ss_pred EEEEEEEEEEecCCeEEEEEEEe
Confidence 35688899998877777665443
No 58
>4fei_A Heat shock protein-related protein; stress response, alpha-crystallin domain fold, aggregates, C chaperone; 2.40A {Deinococcus radiodurans}
Probab=32.22 E-value=48 Score=16.08 Aligned_cols=17 Identities=24% Similarity=0.272 Sum_probs=11.6
Q ss_pred eEEEEEEeCCCcceEEEEEe
Q psy6739 14 QIEVTFDIDANGILNVTAIE 33 (56)
Q Consensus 14 ~i~V~f~~d~nGil~V~a~~ 33 (56)
.|.-.| .||+|+|++.-
T Consensus 77 ~i~A~~---~~GvL~I~lpK 93 (102)
T 4fei_A 77 SGVASL---AGGVLTVRFEK 93 (102)
T ss_dssp CCEEEE---ETTEEEEEEEB
T ss_pred HcEEEE---ECCEEEEEEEc
Confidence 355555 38999998754
No 59
>1hcx_A Major autolysin; choline-binding domain, cell WALL attachment; HET: TPT DDQ; 2.6A {Streptococcus pneumoniae} SCOP: b.109.1.1 PDB: 1gvm_A* 2bml_A*
Probab=31.02 E-value=30 Score=17.77 Aligned_cols=12 Identities=25% Similarity=0.869 Sum_probs=9.6
Q ss_pred EEEeCCCcceEE
Q psy6739 18 TFDIDANGILNV 29 (56)
Q Consensus 18 ~f~~d~nGil~V 29 (56)
.|.+|.||+++|
T Consensus 115 ~y~~~~dG~~~~ 126 (127)
T 1hcx_A 115 EFTVEPDGLITV 126 (127)
T ss_dssp CEEECTTCCEEE
T ss_pred cEEECCCcEEEc
Confidence 577888888876
No 60
>1tol_A G3P - TOLA, protein (fusion protein consisting of minor coat protein, glycine rich linker, TOLA,...; bacteriophage M13, phage infection; 1.85A {Enterobacteria phage M13} SCOP: b.37.1.1 d.212.1.1 PDB: 2x9a_B 3qdr_A* 3qdp_A* 1s62_A
Probab=30.02 E-value=36 Score=19.68 Aligned_cols=22 Identities=14% Similarity=0.415 Sum_probs=16.1
Q ss_pred CCcCeEEEEEEeCCCcce-EEEEE
Q psy6739 10 RGVPQIEVTFDIDANGIL-NVTAI 32 (56)
Q Consensus 10 ~g~~~i~V~f~~d~nGil-~V~a~ 32 (56)
+|. .+.|.|.++.+|.| .+++.
T Consensus 151 ~G~-~v~Vrf~L~pdG~Vlsv~V~ 173 (222)
T 1tol_A 151 AGK-TCTLRIKLAPDGMLLDIKPE 173 (222)
T ss_dssp TTC-CEEEEEEECTTSCEEEEEEE
T ss_pred CCC-EEEEEEEECCCCCEEEEEec
Confidence 454 59999999999984 44443
No 61
>2p92_A Hypothetical protein; unknown function; HET: MSE; 1.73A {Staphylococcus aureus} SCOP: d.64.2.1
Probab=29.66 E-value=50 Score=17.21 Aligned_cols=19 Identities=32% Similarity=0.608 Sum_probs=11.0
Q ss_pred CCCCcCeEEEEEEeCCCcc
Q psy6739 8 APRGVPQIEVTFDIDANGI 26 (56)
Q Consensus 8 ~p~g~~~i~V~f~~d~nGi 26 (56)
.|++..=|+|+|..+.||.
T Consensus 15 ~~~~~~MI~V~i~~~~~g~ 33 (126)
T 2p92_A 15 VPRGSHMITVDITVNDEGK 33 (126)
T ss_dssp ------CEEEEEEECTTSC
T ss_pred CCCccccEEEEEEECCCCC
Confidence 4666656999999888875
No 62
>2ov7_A 50S ribosomal protein L1; 2.30A {Thermus thermophilus} PDB: 2oum_A 2vpl_A
Probab=27.80 E-value=62 Score=17.18 Aligned_cols=15 Identities=20% Similarity=0.485 Sum_probs=12.8
Q ss_pred EEEEeCCCcceEEEE
Q psy6739 17 VTFDIDANGILNVTA 31 (56)
Q Consensus 17 V~f~~d~nGil~V~a 31 (56)
|.|.+|..|++++.+
T Consensus 70 v~fr~dk~~~ih~~V 84 (137)
T 2ov7_A 70 IEFRNDKTGAIHAPV 84 (137)
T ss_dssp EEEECCTTSEEEEEE
T ss_pred EEEEECCCCEEEEEE
Confidence 788899999988875
No 63
>1mit_A RCMTI-V, trypsin inhibitor V; serine protease inhibitor (RCMTI-V); NMR {Cucurbita maxima} SCOP: d.40.1.1 PDB: 1tin_A
Probab=26.95 E-value=43 Score=15.51 Aligned_cols=12 Identities=17% Similarity=0.440 Sum_probs=8.6
Q ss_pred EEEEEeCCCcce
Q psy6739 16 EVTFDIDANGIL 27 (56)
Q Consensus 16 ~V~f~~d~nGil 27 (56)
+|.+.+|.+|++
T Consensus 51 RV~V~vD~~g~V 62 (69)
T 1mit_A 51 RVRIWVNKRGLV 62 (69)
T ss_dssp EEEEEEETTTEE
T ss_pred EEEEEECCCCcE
Confidence 567777777765
No 64
>1to2_I Chymotrypsin inhibitor 2; serine protease, hydrolase; HET: CIT 15P; 1.30A {Hordeum vulgare subsp} SCOP: d.40.1.1 PDB: 1tm3_I* 1tm5_I* 1tm1_I* 1tm7_I* 1tm4_I* 1y4a_I* 1y4d_I 1tmg_I* 1lw6_I 1y3b_I* 1y1k_I* 1y34_I* 1y48_I* 1y3d_I* 1y3c_I* 1y33_I* 1to1_I* 1y3f_I* 3ci2_A 1coa_I ...
Probab=25.65 E-value=50 Score=15.01 Aligned_cols=12 Identities=17% Similarity=0.152 Sum_probs=7.3
Q ss_pred EEEEEeCCCcce
Q psy6739 16 EVTFDIDANGIL 27 (56)
Q Consensus 16 ~V~f~~d~nGil 27 (56)
+|.+.+|.+|++
T Consensus 46 RV~v~vD~~g~V 57 (64)
T 1to2_I 46 RVRLFVDRLDNI 57 (64)
T ss_dssp EEEEEECTTSBB
T ss_pred EEEEEECCCCeE
Confidence 456666666654
No 65
>3k6f_A T-cadherin; cell adhesion, calcium, cell membrane, cleavage on PAIR of basic residues, glycoprotein, GPI-anchor, lipoprotein, membrane; 1.81A {Mus musculus}
Probab=25.61 E-value=65 Score=15.48 Aligned_cols=27 Identities=26% Similarity=0.502 Sum_probs=13.2
Q ss_pred EEeCCC-cceEEE-EEeCcCCceEEEEEE
Q psy6739 19 FDIDAN-GILNVT-AIEKSTGKENKITIT 45 (56)
Q Consensus 19 f~~d~n-Gil~V~-a~~~~~~~~~~~~i~ 45 (56)
|.+|.+ |.|.+. ..|.+......+.+.
T Consensus 51 F~Id~~tG~i~~~~~LDrE~~~~y~l~V~ 79 (100)
T 3k6f_A 51 FRINENTGSVSVTRTLDRETIATYQLYVE 79 (100)
T ss_dssp EEECTTTCEEEECSCCCTTTCSEEEEEEE
T ss_pred EEEECCCCEEEECcccCCcCCCEEEEEEE
Confidence 666654 766654 233334444444443
No 66
>3q1n_A Galactose mutarotase related enzyme; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-biology; HET: MSE; 1.61A {Lactobacillus casei}
Probab=25.22 E-value=1.1e+02 Score=17.75 Aligned_cols=21 Identities=19% Similarity=0.395 Sum_probs=12.9
Q ss_pred CeEEEEEEeCCCcc-eEEEEEe
Q psy6739 13 PQIEVTFDIDANGI-LNVTAIE 33 (56)
Q Consensus 13 ~~i~V~f~~d~nGi-l~V~a~~ 33 (56)
..++|+|+++.|++ ++.+++.
T Consensus 109 ~~~~v~y~L~~~~L~i~~~~~N 130 (294)
T 3q1n_A 109 YTLAVTYMLTDGGLSVHYTVTN 130 (294)
T ss_dssp EEEEEEEEEETTEEEEEEEEEE
T ss_pred EEEEEEEEEeCCEEEEEEEEEc
Confidence 45788888876553 4444443
No 67
>3fcg_A F1 capsule-anchoring protein; beta barrel, beta strand swapping, cell membrane, cell outer membrane, cell projection, fimbrium, membrane; 2.85A {Yersinia pestis}
Probab=24.64 E-value=73 Score=15.69 Aligned_cols=24 Identities=29% Similarity=0.390 Sum_probs=16.1
Q ss_pred CCCcceEEEEEeCcCCceEEEEEEc
Q psy6739 22 DANGILNVTAIEKSTGKENKITITN 46 (56)
Q Consensus 22 d~nGil~V~a~~~~~~~~~~~~i~~ 46 (56)
...|-|.|.+++ +.|+...+.+..
T Consensus 57 ~~~Gdl~V~v~e-adG~~~~~~vp~ 80 (90)
T 3fcg_A 57 GGSGELKVIIHE-SDGTKQVFTVPY 80 (90)
T ss_dssp -CCEEEEEEEEC-TTSCEEEEEEEE
T ss_pred CCceeEEEEEEE-CCCCEEEEEECc
Confidence 456778888877 667776666654
No 68
>4hyz_A Uncharacterized protein; PF13026 family protein, DUF3887, structural genomics, joint for structural genomics, JCSG; 2.25A {Ruminococcus gnavus}
Probab=24.62 E-value=68 Score=16.05 Aligned_cols=14 Identities=14% Similarity=0.256 Sum_probs=9.0
Q ss_pred eEEEEEEeCCCcce
Q psy6739 14 QIEVTFDIDANGIL 27 (56)
Q Consensus 14 ~i~V~f~~d~nGil 27 (56)
.+..++.+|.||.|
T Consensus 96 ~~~f~i~Fd~d~kl 109 (114)
T 4hyz_A 96 NVNYSLAYDEDMNL 109 (114)
T ss_dssp EEEEEEEECTTSCE
T ss_pred ceEEEEEECCCCcE
Confidence 36666677776655
No 69
>3nre_A Aldose 1-epimerase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2, isomerase; HET: MSE; 1.59A {Escherichia coli}
Probab=24.54 E-value=1.1e+02 Score=17.71 Aligned_cols=17 Identities=29% Similarity=0.489 Sum_probs=11.0
Q ss_pred CeEEEEEEeCCCcceEEE
Q psy6739 13 PQIEVTFDIDANGILNVT 30 (56)
Q Consensus 13 ~~i~V~f~~d~nGil~V~ 30 (56)
..++|+|+++.|+ |+++
T Consensus 115 ~~~~v~y~L~~~~-L~i~ 131 (291)
T 3nre_A 115 YRVSQAFHLTADT-LTVT 131 (291)
T ss_dssp EEEEEEEEECSSE-EEEE
T ss_pred EEEEEEEEEeCCe-EEEE
Confidence 4578888887654 4444
No 70
>2ggv_A NS2B, non-structural protein 2B; beta barrel, serine protease, viral protease, flavivirus, hydrolase; 1.80A {West nile virus}
Probab=24.45 E-value=27 Score=15.92 Aligned_cols=16 Identities=19% Similarity=0.565 Sum_probs=11.5
Q ss_pred CeEEEEEEeCCCcceEEE
Q psy6739 13 PQIEVTFDIDANGILNVT 30 (56)
Q Consensus 13 ~~i~V~f~~d~nGil~V~ 30 (56)
+.++|+ +|.+|-++..
T Consensus 26 ~rldV~--~d~~G~f~L~ 41 (56)
T 2ggv_A 26 ERVDVR--LDDDGNFQLM 41 (56)
T ss_dssp ECCCEE--ECTTSCEEET
T ss_pred ceEEEE--ECCCCCEEEc
Confidence 446666 9999998654
No 71
>1vbw_A Trypsin inhibitor BGIT; BGTI, protein binding; HET: TLA; 0.93A {Momordica charantia}
Probab=24.43 E-value=54 Score=15.09 Aligned_cols=13 Identities=23% Similarity=0.271 Sum_probs=9.2
Q ss_pred EEEEEEeCCCcce
Q psy6739 15 IEVTFDIDANGIL 27 (56)
Q Consensus 15 i~V~f~~d~nGil 27 (56)
=+|.+.+|.+|++
T Consensus 49 ~RV~v~vD~~g~V 61 (68)
T 1vbw_A 49 DRVRVWVTERGIV 61 (68)
T ss_dssp TEEEEEECTTSBB
T ss_pred CEEEEEECCCCcE
Confidence 4577778888765
No 72
>2jwk_A Protein TOLR; periplasmic domain, membrane, inner membrane, protein transport, transmembrane, transport, membrane protein; NMR {Haemophilus influenzae} PDB: 2jwl_A
Probab=23.64 E-value=60 Score=14.37 Aligned_cols=14 Identities=14% Similarity=0.401 Sum_probs=11.5
Q ss_pred EEEEeCCCcceEEE
Q psy6739 17 VTFDIDANGILNVT 30 (56)
Q Consensus 17 V~f~~d~nGil~V~ 30 (56)
+.+.++.+|.+.+.
T Consensus 5 i~v~I~~dG~~~~~ 18 (74)
T 2jwk_A 5 VILEVAGIGKYAIS 18 (74)
T ss_dssp EEEEECSSSCEEEE
T ss_pred EEEEEecCccEEEe
Confidence 66789999988776
No 73
>2eey_A Molybdopterin biosynthesis; molybdenium precursor bosynthesis, structural genomics; 1.94A {Geobacillus kaustophilus}
Probab=23.38 E-value=1e+02 Score=16.96 Aligned_cols=24 Identities=21% Similarity=0.412 Sum_probs=15.4
Q ss_pred cCeEEEEEEeCCC-cc--eEEEEEeCc
Q psy6739 12 VPQIEVTFDIDAN-GI--LNVTAIEKS 35 (56)
Q Consensus 12 ~~~i~V~f~~d~n-Gi--l~V~a~~~~ 35 (56)
...++|.|.++.+ .- ++++++...
T Consensus 81 lt~v~v~~~~~~~~~~~~v~i~a~vkt 107 (162)
T 2eey_A 81 LKGVDIAFAWENDGEAHKLVITATVKT 107 (162)
T ss_dssp CCEEEEEEEEECSSSSEEEEEEEEEEE
T ss_pred cceEEEEEEEcCcCCceEEEEEEEEEE
Confidence 3468999999853 34 666655443
No 74
>3zxo_A Redox sensor histidine kinase response regulator; transferase; HET: MSE; 1.90A {Mycobacterium tuberculosis}
Probab=23.13 E-value=73 Score=15.17 Aligned_cols=23 Identities=17% Similarity=0.433 Sum_probs=16.7
Q ss_pred eEEEEEEeCCCcceEEEEEeCcCCc
Q psy6739 14 QIEVTFDIDANGILNVTAIEKSTGK 38 (56)
Q Consensus 14 ~i~V~f~~d~nGil~V~a~~~~~~~ 38 (56)
.|.|++..+.+ +.++..|...|.
T Consensus 63 ~i~i~~~~~~~--~~i~v~D~G~gi 85 (129)
T 3zxo_A 63 TLTVRVKVDDD--LCIEVTDNGRGM 85 (129)
T ss_dssp EEEEEEEESSE--EEEEEEECCCCC
T ss_pred eEEEEEEEcCC--EEEEEecCCCCC
Confidence 58888887766 778877766554
No 75
>4g2e_A Peroxiredoxin; redox protein, structural genomics, NPPSFA, national project protein structural and functional analyses; 1.40A {Sulfolobus tokodaii} PDB: 2ywn_A 3hjp_A
Probab=22.92 E-value=86 Score=15.93 Aligned_cols=15 Identities=27% Similarity=0.383 Sum_probs=12.0
Q ss_pred EEEEEEeCCCcceEE
Q psy6739 15 IEVTFDIDANGILNV 29 (56)
Q Consensus 15 i~V~f~~d~nGil~V 29 (56)
...+|-+|.+|.+.-
T Consensus 119 ~p~tflID~~G~I~~ 133 (157)
T 4g2e_A 119 KRAVFVIDKEGKVRY 133 (157)
T ss_dssp CEEEEEECTTSBEEE
T ss_pred eeeEEEECCCCEEEE
Confidence 456899999999753
No 76
>2con_A RUH-035 protein, NIN one binding protein; ribosome, RNA binding protein, unknown function, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: g.41.15.1
Probab=22.89 E-value=17 Score=17.70 Aligned_cols=18 Identities=22% Similarity=0.386 Sum_probs=14.2
Q ss_pred eEEEEEEeCCCcceEEEE
Q psy6739 14 QIEVTFDIDANGILNVTA 31 (56)
Q Consensus 14 ~i~V~f~~d~nGil~V~a 31 (56)
-..|..++|.||.+.+-.
T Consensus 41 L~Rvsvsvd~~G~~~~hl 58 (79)
T 2con_A 41 LKKVSVTINDDGTLHMHF 58 (79)
T ss_dssp CEEEECBCCSSCCCBCCC
T ss_pred ceEEEEEECCCCcEEEec
Confidence 378899999999976543
No 77
>1obb_A Maltase, alpha-glucosidase; glycosidase, sulfinic acid, NAD+, maltose, hydrolase; HET: MAL NAD; 1.90A {Thermotoga maritima} SCOP: c.2.1.5 d.162.1.2
Probab=22.84 E-value=57 Score=20.73 Aligned_cols=24 Identities=33% Similarity=0.310 Sum_probs=18.7
Q ss_pred CCCCCCCcCeEEEEEEeCCCcceEE
Q psy6739 5 IPPAPRGVPQIEVTFDIDANGILNV 29 (56)
Q Consensus 5 ip~~p~g~~~i~V~f~~d~nGil~V 29 (56)
|+..|.... |+|...+|.+|+--+
T Consensus 381 I~~lp~d~v-VEvp~~v~~~G~~p~ 404 (480)
T 1obb_A 381 IHGIDDDVV-VEVPALVDKNGIHPE 404 (480)
T ss_dssp STTSCTTSE-EEEEEEEETTEEEEC
T ss_pred eCCCCCCeE-EEEEEEEcCCCCEee
Confidence 566777764 999999999998543
No 78
>1zo0_A ODC-AZ, ornithine decarboxylase antizyme; ornithine decarboxylase inhibitor, lyase inhibitor; NMR {Rattus norvegicus} SCOP: d.108.1.7
Probab=22.70 E-value=95 Score=16.34 Aligned_cols=24 Identities=29% Similarity=0.303 Sum_probs=15.0
Q ss_pred CCcceEEEEEeCcCCceEEEEEEc
Q psy6739 23 ANGILNVTAIEKSTGKENKITITN 46 (56)
Q Consensus 23 ~nGil~V~a~~~~~~~~~~~~i~~ 46 (56)
.||.|+|+.....+++...+.+..
T Consensus 4 sd~~L~V~ee~~~n~~~~~L~F~~ 27 (126)
T 1zo0_A 4 SDERLNVTEEPTSNDKTRVLSIQC 27 (126)
T ss_dssp ECSSEEEEEECCTTSSCEEEEEEE
T ss_pred ccCeeEEEeecCCCCCceEEEEEE
Confidence 466777777655566666666553
No 79
>4gio_A Putative lipoprotein; unknown function; 1.90A {Campylobacter jejuni subsp}
Probab=22.61 E-value=86 Score=15.77 Aligned_cols=29 Identities=28% Similarity=0.361 Sum_probs=20.8
Q ss_pred CCCCcCeEEEEEEeCCCcceEEEEEeCcCC
Q psy6739 8 APRGVPQIEVTFDIDANGILNVTAIEKSTG 37 (56)
Q Consensus 8 ~p~g~~~i~V~f~~d~nGil~V~a~~~~~~ 37 (56)
.+++. .+...=..+.||.|+|.+....+.
T Consensus 20 l~~~l-~~~~~~~~~~nG~l~v~v~~~s~~ 48 (107)
T 4gio_A 20 LPKSL-VKQFQKRINSNGYLEFEVILRSTF 48 (107)
T ss_dssp SCTTS-EEEEEEEECTTSCEEEEEEECCSS
T ss_pred cccce-eeccceEEccCCEEEEEEEecCCC
Confidence 45665 355666678999999998876653
No 80
>3ppe_A Vascular endothelial cadherin; extracellular cadherin (EC) domain, beta barrel, IG-domain L domain swapped dimer interface; 2.10A {Gallus gallus}
Probab=22.36 E-value=83 Score=17.05 Aligned_cols=28 Identities=14% Similarity=0.480 Sum_probs=16.4
Q ss_pred EEeCCCcceEEE--EEeCcCCceEEEEEEc
Q psy6739 19 FDIDANGILNVT--AIEKSTGKENKITITN 46 (56)
Q Consensus 19 f~~d~nGil~V~--a~~~~~~~~~~~~i~~ 46 (56)
|.+|.+|.|.+. ..+.+......+.+..
T Consensus 153 F~I~~tG~i~~~~~~LD~E~~~~y~l~V~A 182 (203)
T 3ppe_A 153 FTVDDSGVIFTARADLDRESQSAYEIIVKA 182 (203)
T ss_dssp EEECTTSEEEESCSCCCTTTCSEEEEEEEE
T ss_pred EEEeCCeEEEECCcCCCcccCCEEEEEEEE
Confidence 667766777764 3444555555555543
No 81
>3aab_A Putative uncharacterized protein ST1653; alpha-crystallin domain, chaperone; 1.85A {Sulfolobus tokodaii} PDB: 3aac_A
Probab=22.28 E-value=40 Score=16.96 Aligned_cols=15 Identities=20% Similarity=0.377 Sum_probs=10.7
Q ss_pred EEEEEeCCCcceEEEEEe
Q psy6739 16 EVTFDIDANGILNVTAIE 33 (56)
Q Consensus 16 ~V~f~~d~nGil~V~a~~ 33 (56)
.-.| .||+|+|++--
T Consensus 100 ~A~~---~~GvL~I~lPK 114 (123)
T 3aab_A 100 SGKY---ENGVLTIRIPI 114 (123)
T ss_dssp EEEE---ETTEEEEEEEG
T ss_pred eeEE---cCCEEEEEEEc
Confidence 4555 39999998753
No 82
>3dcd_A Galactose mutarotase related enzyme; Q5FKD7 LAR33 NESG X-RAY, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.90A {Lactobacillus acidophilus}
Probab=22.20 E-value=1.3e+02 Score=17.61 Aligned_cols=21 Identities=14% Similarity=0.301 Sum_probs=12.6
Q ss_pred CeEEEEEEeCCCcc-eEEEEEe
Q psy6739 13 PQIEVTFDIDANGI-LNVTAIE 33 (56)
Q Consensus 13 ~~i~V~f~~d~nGi-l~V~a~~ 33 (56)
..++|+|.++.|++ ++.+++.
T Consensus 109 ~~~~v~y~L~~~~L~i~~~v~N 130 (307)
T 3dcd_A 109 FEFRVNYNLMNNLLEENFSVVN 130 (307)
T ss_dssp EEEEEEEEEETTEEEEEEEEEE
T ss_pred eEEEEEEEEeCCEEEEEEEEEC
Confidence 45888888885543 3444444
No 83
>2x5p_A FBA2, fibronectin binding protein; protein binding; 1.60A {Streptococcus pyogenes}
Probab=22.16 E-value=74 Score=16.34 Aligned_cols=15 Identities=27% Similarity=0.656 Sum_probs=12.0
Q ss_pred EEEEEeCCCcceEEE
Q psy6739 16 EVTFDIDANGILNVT 30 (56)
Q Consensus 16 ~V~f~~d~nGil~V~ 30 (56)
.+.|.++.+|.++|.
T Consensus 92 ~i~ftV~~~g~v~v~ 106 (121)
T 2x5p_A 92 AITFTVNEQGQVTVN 106 (121)
T ss_dssp CEEEEECTTCCEEET
T ss_pred CEEEEEcCCceEEEe
Confidence 468999999988763
No 84
>1gme_A Heat shock protein 16.9B; small heat shock protein, chaperone, alpha-crystallin; 2.70A {Triticum aestivum} SCOP: b.15.1.1 PDB: 2h50_A 2h53_A 2byu_A
Probab=21.81 E-value=70 Score=16.78 Aligned_cols=18 Identities=28% Similarity=0.514 Sum_probs=12.3
Q ss_pred EEEEEEeCCCcceEEEEEeCc
Q psy6739 15 IEVTFDIDANGILNVTAIEKS 35 (56)
Q Consensus 15 i~V~f~~d~nGil~V~a~~~~ 35 (56)
|.-+| .||+|+|++.-..
T Consensus 121 i~A~~---~nGvL~I~lPK~~ 138 (151)
T 1gme_A 121 VKAGL---ENGVLTVTVPKAE 138 (151)
T ss_dssp CEEEE---ETTEEEEEEECCC
T ss_pred eEEEE---ECCEEEEEEEccC
Confidence 44444 5899999885443
No 85
>2asb_A Transcription elongation protein NUSA; protein-RNA complex, transcription/RNA complex; 1.50A {Mycobacterium tuberculosis} SCOP: b.40.4.5 d.52.3.1 d.52.3.1 PDB: 2atw_A
Probab=21.67 E-value=1.3e+02 Score=17.62 Aligned_cols=27 Identities=22% Similarity=0.556 Sum_probs=20.9
Q ss_pred CCcceEEEEEeCcCCceEEEEEEcCCC
Q psy6739 23 ANGILNVTAIEKSTGKENKITITNDRG 49 (56)
Q Consensus 23 ~nGil~V~a~~~~~~~~~~~~i~~~~~ 49 (56)
.+|++++.+.....|....+.+.+...
T Consensus 97 ~dG~veI~~iaRe~G~R~KiAV~s~d~ 123 (251)
T 2asb_A 97 ADGSVEIVAVAREAGHRSKIAVRSNVA 123 (251)
T ss_dssp HTTSEEEEEEEEETTTEEEEEEEESST
T ss_pred hcCeEEEEEEecCCCceeEEEEEcCCC
Confidence 378888888888889988888766433
No 86
>2ci2_I Chymotrypsin inhibitor 2; proteinase inhibitor (chymotrypsin); 2.00A {Hordeum vulgare} SCOP: d.40.1.1 PDB: 2sni_I
Probab=21.61 E-value=64 Score=15.52 Aligned_cols=12 Identities=17% Similarity=0.157 Sum_probs=8.9
Q ss_pred EEEEEeCCCcce
Q psy6739 16 EVTFDIDANGIL 27 (56)
Q Consensus 16 ~V~f~~d~nGil 27 (56)
+|.+.+|.+|++
T Consensus 65 RV~V~vD~~g~V 76 (83)
T 2ci2_I 65 RVRLFVDKLDNI 76 (83)
T ss_dssp EEEEEECTTSBB
T ss_pred EEEEEECCCCcE
Confidence 677778888765
No 87
>1lur_A Aldose 1-epimerase; vitamin B12, methyltransferase, structural genomics, structure-based function assignment, decarboxylase, PSI; 1.85A {Caenorhabditis elegans} SCOP: b.30.5.4
Probab=21.42 E-value=1.2e+02 Score=17.94 Aligned_cols=23 Identities=22% Similarity=0.410 Sum_probs=15.1
Q ss_pred CcCeEEEEEEeCCCcceEEEEEe
Q psy6739 11 GVPQIEVTFDIDANGILNVTAIE 33 (56)
Q Consensus 11 g~~~i~V~f~~d~nGil~V~a~~ 33 (56)
|...+.|+|+++.++.|+|+.+.
T Consensus 137 g~~~~~vtY~L~~~~~L~i~~~a 159 (339)
T 1lur_A 137 GDAKIDVTYTVNDRNQLIIEHHA 159 (339)
T ss_dssp SEEEEEEEEEECTTSEEEEEEEE
T ss_pred eEEEEEEEEEECCCCeEEEEEEE
Confidence 34568888888765656666544
No 88
>3mwx_A Aldose 1-epimerase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2, isomerase; HET: MSE; 1.45A {Bacillus subtilis}
Probab=21.24 E-value=1.3e+02 Score=17.50 Aligned_cols=17 Identities=24% Similarity=0.347 Sum_probs=10.7
Q ss_pred CeEEEEEEeCCCcceEEE
Q psy6739 13 PQIEVTFDIDANGILNVT 30 (56)
Q Consensus 13 ~~i~V~f~~d~nGil~V~ 30 (56)
..++|+|.++.++ |+++
T Consensus 144 ~~~~v~y~L~~~~-L~i~ 160 (326)
T 3mwx_A 144 AVVRMTYTIKENT-LFKH 160 (326)
T ss_dssp EEEEEEEEEETTE-EEEE
T ss_pred EEEEEEEEEcCCc-EEEE
Confidence 4577778887665 4433
No 89
>3qve_A HMG box-containing protein 1; SGC, HMG box transcription factor 1, HBP1, AXH domain, struc genomics consortium, transcription; 2.04A {Homo sapiens} PDB: 1v06_A
Probab=21.19 E-value=1.1e+02 Score=16.47 Aligned_cols=21 Identities=29% Similarity=0.453 Sum_probs=13.7
Q ss_pred cCeEEEEEEeCCC--cceEEEEE
Q psy6739 12 VPQIEVTFDIDAN--GILNVTAI 32 (56)
Q Consensus 12 ~~~i~V~f~~d~n--Gil~V~a~ 32 (56)
..-+.++|.++.. ..+++++.
T Consensus 72 ~~~v~ltF~~G~~~~~~V~le~~ 94 (139)
T 3qve_A 72 ESVLKLTFDPGTVEDGLLTVECK 94 (139)
T ss_dssp EEEEEEEEECSCGGGCCEEEEEE
T ss_pred CcEEEEEEecCCccceEEEEecc
Confidence 3457889999883 44655543
No 90
>2v2f_A Penicillin binding protein 1A; transpeptidase activity, peptidoglycan synthesis, transferase, hydrolase; HET: MES; 1.9A {Streptococcus pneumoniae} PDB: 2zc5_A* 2zc6_A*
Probab=21.09 E-value=42 Score=12.18 Aligned_cols=11 Identities=18% Similarity=-0.040 Sum_probs=7.4
Q ss_pred EEEeCCCcceE
Q psy6739 18 TFDIDANGILN 28 (56)
Q Consensus 18 ~f~~d~nGil~ 28 (56)
+.-||.||-+-
T Consensus 7 s~IYD~~g~~i 17 (26)
T 2v2f_A 7 SKIYDNKNQLI 17 (26)
T ss_pred CEEEeCCCCEe
Confidence 34489998753
No 91
>2f1d_A IGPD 1, imidazoleglycerol-phosphate dehydratase 1; herbicide, manganese, histidine biosynthesis, lyase; 3.00A {Arabidopsis thaliana} SCOP: d.14.1.9 d.14.1.9
Probab=20.91 E-value=1.3e+02 Score=17.28 Aligned_cols=20 Identities=15% Similarity=0.459 Sum_probs=15.4
Q ss_pred CcCeEEEEEEeCCCcceEEE
Q psy6739 11 GVPQIEVTFDIDANGILNVT 30 (56)
Q Consensus 11 g~~~i~V~f~~d~nGil~V~ 30 (56)
.+..|+|++.+|..|...|.
T Consensus 20 ~ET~I~v~l~LDG~G~~~i~ 39 (207)
T 2f1d_A 20 KETNVSVKINLDGTGVADSS 39 (207)
T ss_dssp SSCEEEEEEETTCCCCEEEE
T ss_pred CcEEEEEEEEeCCCCceeee
Confidence 35679999999988876654
No 92
>3d33_A Domain of unknown function with AN immunoglobulin beta-sandwich fold; structural genomics, joint center for structural genomics; HET: MSE; 1.70A {Bacteroides vulgatus atcc 8482}
Probab=20.83 E-value=96 Score=15.69 Aligned_cols=25 Identities=4% Similarity=0.112 Sum_probs=16.6
Q ss_pred eEEEEEEeCCCcceEEEEEeCcCCce
Q psy6739 14 QIEVTFDIDANGILNVTAIEKSTGKE 39 (56)
Q Consensus 14 ~i~V~f~~d~nGil~V~a~~~~~~~~ 39 (56)
.+.|.| .+..+-++|++++.++|+.
T Consensus 39 ~L~I~F-~~~~~~vtItI~~~~tG~i 63 (108)
T 3d33_A 39 LLTLKN-ASPDRDMTIRITDMAKGGV 63 (108)
T ss_dssp EEEEEE-SSCCSEEEEEEEETTTCCE
T ss_pred EEEEEE-CCcCCCEEEEEEECCCCcE
Confidence 366666 6666777777776666654
No 93
>2l55_A SILB,silver efflux protein, MFP component of the components proton antiporter metal...; APO form, AG(I)-binding site; NMR {Cupriavidus metallidurans}
Probab=20.77 E-value=84 Score=14.98 Aligned_cols=25 Identities=16% Similarity=0.495 Sum_probs=14.4
Q ss_pred CCCCcCeEEEEEEeCCCcceEEEEEe
Q psy6739 8 APRGVPQIEVTFDIDANGILNVTAIE 33 (56)
Q Consensus 8 ~p~g~~~i~V~f~~d~nGil~V~a~~ 33 (56)
.+.|. +|+.+|..+.+|.+.|+...
T Consensus 48 lk~Gd-~V~F~~~~~~~g~~~it~i~ 72 (82)
T 2l55_A 48 LKAGD-RVAFSFRLDPHGMATLVTVA 72 (82)
T ss_dssp CSTTC-EEEEEEEEETTTEEEEEEEE
T ss_pred CCCCC-EEEEEEEECCCCeEEEEEEE
Confidence 44454 47777766665555555543
No 94
>3kf6_B Protein TEN1; OB fold, chromosomal protein, DNA-binding, nucleus, telomere; 1.65A {Schizosaccharomyces pombe} PDB: 3k0x_A
Probab=20.73 E-value=62 Score=16.62 Aligned_cols=27 Identities=22% Similarity=0.409 Sum_probs=17.8
Q ss_pred ccCCCCCCCCcCeEEE---EEEeCCCcceEEE
Q psy6739 2 LTSIPPAPRGVPQIEV---TFDIDANGILNVT 30 (56)
Q Consensus 2 l~~ip~~p~g~~~i~V---~f~~d~nGil~V~ 30 (56)
|+.||..|.|. |++. --+|+ +|.|+++
T Consensus 12 Ls~lp~~~~G~-KVRFLGCV~sY~-tg~L~Le 41 (105)
T 3kf6_B 12 INQINDCKDGQ-KLRFLGCVQSYK-NGILRLI 41 (105)
T ss_dssp GGGGGGSCTTC-EEEEEEEEEEEE-TTEEEEE
T ss_pred hhhccCCCCCC-EEEEEEEeeeec-cEEEEEc
Confidence 45567777775 3332 33688 9999888
No 95
>3e9v_A Protein BTG2; B-cell translocation gene 2, structural genomics, PSI- 2, protein structure initiative; 1.70A {Homo sapiens} SCOP: d.370.1.1 PDB: 3dju_B 3djn_B
Probab=20.56 E-value=98 Score=16.05 Aligned_cols=16 Identities=31% Similarity=0.559 Sum_probs=12.7
Q ss_pred EEEEEEeCCCcceEEE
Q psy6739 15 IEVTFDIDANGILNVT 30 (56)
Q Consensus 15 i~V~f~~d~nGil~V~ 30 (56)
-+|.+.+..+|.+.|-
T Consensus 100 geVs~R~GE~g~i~vl 115 (120)
T 3e9v_A 100 YEVSYRIGEDGSICVL 115 (120)
T ss_dssp TEEEEEESTTSCEEEE
T ss_pred CEEEEEecCCCeEEEE
Confidence 5788889998887664
No 96
>1nsx_A Galactose mutarotase; epimerase, galactose metabolism, isomerase; HET: GAL; 1.75A {Lactococcus lactis} SCOP: b.30.5.4 PDB: 1nsz_A* 1mmu_A* 1l7k_A* 1l7j_A* 1mmx_A* 1mmy_A* 1mmz_A* 1mn0_A* 1ns0_A* 1ns4_A* 1ns8_A* 1nsr_A* 1nsu_A* 1nsv_A* 1ns7_A* 1ns2_A* 1nsm_A* 1nss_A*
Probab=20.19 E-value=1.2e+02 Score=18.08 Aligned_cols=22 Identities=18% Similarity=0.258 Sum_probs=13.9
Q ss_pred CcCeEEEEEEeCCCcceEEEEE
Q psy6739 11 GVPQIEVTFDIDANGILNVTAI 32 (56)
Q Consensus 11 g~~~i~V~f~~d~nGil~V~a~ 32 (56)
|...+.|+|+++.++.|+|+.+
T Consensus 135 g~~~~~vtY~L~~~~~L~i~~~ 156 (347)
T 1nsx_A 135 GKIEMSVTHSFDDDNKWKIHYE 156 (347)
T ss_dssp SCEEEEEEEEEETTSEEEEEEE
T ss_pred eEEEEEEEEEECCCCeEEEEEE
Confidence 3456888888875555555543
No 97
>2w7v_A General secretion pathway protein L; transport, type II secretion, transport protein; 2.30A {Vibrio parahaemolyticus}
Probab=20.18 E-value=18 Score=18.14 Aligned_cols=23 Identities=22% Similarity=0.465 Sum_probs=14.9
Q ss_pred eEEE-EEEeCCC-cceEEEEEeCcC
Q psy6739 14 QIEV-TFDIDAN-GILNVTAIEKST 36 (56)
Q Consensus 14 ~i~V-~f~~d~n-Gil~V~a~~~~~ 36 (56)
.+++ ++.||.+ |-|.+.++..+-
T Consensus 26 ~l~~~sLryD~~R~ELrlq~~A~dF 50 (95)
T 2w7v_A 26 DLEITSFKYDGQRGEVRIHARSSDF 50 (95)
T ss_dssp TCEEEEEEEETTTTEEEEEEEESSS
T ss_pred CceEEEEeecCCCCeEEEEEecCCH
Confidence 3555 7889876 667776655443
No 98
>3msw_A Uncharacterized protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE; 1.90A {Bacteroides fragilis}
Probab=20.05 E-value=1e+02 Score=16.68 Aligned_cols=18 Identities=17% Similarity=0.231 Sum_probs=14.6
Q ss_pred CeEEEEEEeCCCcceEEE
Q psy6739 13 PQIEVTFDIDANGILNVT 30 (56)
Q Consensus 13 ~~i~V~f~~d~nGil~V~ 30 (56)
+.++=.|.||.+|.|...
T Consensus 37 ~~lkY~Y~YD~~~rvteK 54 (145)
T 3msw_A 37 PVKMYKYSYDTDQQKTVK 54 (145)
T ss_dssp EEEEEEEEEETTTTEEEE
T ss_pred ceeEEEeEECCCCCEeeh
Confidence 467888999999998765
Done!