Query psy675
Match_columns 1175
No_of_seqs 481 out of 2204
Neff 8.5
Searched_HMMs 46136
Date Fri Aug 16 17:29:25 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy675.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/675hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG1777|consensus 100.0 6.5E-72 1.4E-76 595.6 27.7 463 38-517 1-524 (625)
2 KOG1777|consensus 100.0 2E-42 4.4E-47 370.0 24.8 407 391-846 126-534 (625)
3 TIGR03808 RR_plus_rpt_1 twin-a 99.9 2E-23 4.2E-28 233.6 33.0 356 69-480 52-426 (455)
4 TIGR03805 beta_helix_1 paralle 99.8 1E-18 2.3E-23 196.6 27.6 270 74-405 1-285 (314)
5 COG3420 NosD Nitrous oxidase a 99.8 7.3E-19 1.6E-23 185.4 23.5 261 81-436 31-293 (408)
6 TIGR03808 RR_plus_rpt_1 twin-a 99.6 9.1E-14 2E-18 156.5 26.3 270 520-851 135-424 (455)
7 COG3420 NosD Nitrous oxidase a 99.6 2.4E-13 5.2E-18 144.1 19.8 217 560-801 76-309 (408)
8 PLN02634 probable pectinestera 99.5 1.3E-12 2.7E-17 145.7 21.5 199 6-234 17-235 (359)
9 PLN02480 Probable pectinestera 99.5 2.3E-12 5.1E-17 144.0 21.4 154 65-234 54-218 (343)
10 PF07602 DUF1565: Protein of u 99.5 3.3E-12 7.1E-17 135.8 21.0 143 65-234 9-158 (246)
11 PLN02682 pectinesterase family 99.4 4.6E-12 9.9E-17 142.0 21.0 152 67-234 78-249 (369)
12 PF13229 Beta_helix: Right han 99.4 5.6E-13 1.2E-17 136.2 11.8 153 955-1109 2-158 (158)
13 PLN02773 pectinesterase 99.4 2.1E-11 4.5E-16 135.0 22.8 149 66-234 12-183 (317)
14 PF13229 Beta_helix: Right han 99.4 2.1E-12 4.5E-17 132.0 13.5 153 315-469 2-158 (158)
15 TIGR03805 beta_helix_1 paralle 99.4 2.2E-11 4.8E-16 137.5 22.8 173 560-761 62-250 (314)
16 PLN02671 pectinesterase 99.4 3.4E-11 7.3E-16 134.7 21.4 156 65-234 65-239 (359)
17 PLN02304 probable pectinestera 99.4 4.7E-11 1E-15 133.9 21.3 153 66-234 82-248 (379)
18 PF05048 NosD: Periplasmic cop 99.4 2.8E-11 6.2E-16 132.6 19.3 136 710-850 36-172 (236)
19 PLN02432 putative pectinestera 99.4 6E-11 1.3E-15 129.9 21.3 147 66-233 18-173 (293)
20 PLN02176 putative pectinestera 99.3 5.9E-11 1.3E-15 132.2 21.3 153 65-233 45-208 (340)
21 PRK10531 acyl-CoA thioesterase 99.3 1.1E-10 2.5E-15 132.4 23.5 158 65-234 88-303 (422)
22 PLN02497 probable pectinestera 99.3 7.5E-11 1.6E-15 130.9 21.1 153 66-234 39-203 (331)
23 PLN02665 pectinesterase family 99.3 6.5E-11 1.4E-15 133.3 20.8 155 65-235 74-241 (366)
24 PF05048 NosD: Periplasmic cop 99.3 5.3E-11 1.2E-15 130.4 18.4 151 954-1109 14-165 (236)
25 PF01095 Pectinesterase: Pecti 99.3 9.9E-11 2.1E-15 130.4 18.6 149 66-234 7-168 (298)
26 PF14592 Chondroitinas_B: Chon 99.3 8.1E-10 1.7E-14 125.1 25.6 258 71-382 4-285 (425)
27 PLN02916 pectinesterase family 99.3 3E-10 6.4E-15 132.3 21.0 150 65-234 193-358 (502)
28 PLN02933 Probable pectinestera 99.2 3.5E-10 7.7E-15 132.8 21.5 150 65-234 224-386 (530)
29 PLN02708 Probable pectinestera 99.2 3.4E-10 7.4E-15 135.2 21.6 149 65-233 247-410 (553)
30 PLN02745 Putative pectinestera 99.2 3.9E-10 8.4E-15 135.4 21.8 150 65-234 291-453 (596)
31 PLN02201 probable pectinestera 99.2 3.7E-10 8.1E-15 132.9 21.1 149 65-233 212-373 (520)
32 PLN02995 Probable pectinestera 99.2 3.7E-10 7.9E-15 134.3 21.1 150 65-234 229-393 (539)
33 PLN02217 probable pectinestera 99.2 3.6E-10 7.9E-15 135.9 21.1 150 65-234 256-418 (670)
34 PLN02488 probable pectinestera 99.2 4.4E-10 9.6E-15 130.0 20.9 150 65-234 203-365 (509)
35 PLN02990 Probable pectinestera 99.2 4.4E-10 9.5E-15 134.5 21.2 149 65-233 265-427 (572)
36 PLN02170 probable pectinestera 99.2 6.6E-10 1.4E-14 130.0 21.8 150 65-234 231-394 (529)
37 PLN02713 Probable pectinestera 99.2 4.1E-10 9E-15 134.6 20.5 150 65-234 256-421 (566)
38 PLN02506 putative pectinestera 99.2 5.3E-10 1.1E-14 132.6 20.5 150 65-234 238-400 (537)
39 PLN02484 probable pectinestera 99.2 7.7E-10 1.7E-14 132.8 21.7 151 65-234 278-441 (587)
40 PLN02468 putative pectinestera 99.2 5.9E-10 1.3E-14 133.5 20.6 150 65-234 264-426 (565)
41 PLN02301 pectinesterase/pectin 99.2 4.4E-10 9.5E-15 133.4 18.6 149 65-233 242-403 (548)
42 PLN02197 pectinesterase 99.2 9.1E-10 2E-14 131.5 19.5 149 65-233 281-444 (588)
43 PLN02314 pectinesterase 99.2 1.2E-09 2.6E-14 131.7 20.0 150 65-234 284-446 (586)
44 PLN02416 probable pectinestera 99.1 6.7E-10 1.5E-14 132.1 16.9 149 65-233 236-397 (541)
45 PLN03043 Probable pectinestera 99.1 2.1E-09 4.6E-14 128.0 20.6 150 65-234 229-394 (538)
46 PLN02313 Pectinesterase/pectin 99.1 1.4E-09 3E-14 130.9 18.9 149 65-233 281-442 (587)
47 PF12708 Pectate_lyase_3: Pect 98.7 1.5E-06 3.3E-11 94.4 20.6 49 67-118 14-64 (225)
48 COG4677 PemB Pectin methyleste 98.6 1.1E-06 2.4E-11 93.6 14.7 51 65-116 88-142 (405)
49 PF01696 Adeno_E1B_55K: Adenov 98.5 0.00012 2.7E-09 82.3 28.7 163 66-258 49-221 (386)
50 PLN02188 polygalacturonase/gly 98.1 0.0019 4.1E-08 75.5 29.7 208 67-296 49-286 (404)
51 PLN02793 Probable polygalactur 98.1 0.0089 1.9E-07 70.8 35.1 228 67-310 65-324 (443)
52 PLN02218 polygalacturonase ADP 98.1 0.0061 1.3E-07 71.8 33.5 180 68-264 81-291 (431)
53 PLN03003 Probable polygalactur 98.1 0.0035 7.7E-08 73.6 29.6 177 67-264 36-237 (456)
54 PLN02155 polygalacturonase 98.0 0.014 3E-07 68.1 32.1 183 67-264 40-244 (394)
55 PLN03010 polygalacturonase 97.9 0.031 6.8E-07 65.3 34.1 179 67-264 59-256 (409)
56 PF07602 DUF1565: Protein of u 97.9 0.00012 2.7E-09 78.5 12.4 102 1046-1150 115-225 (246)
57 PLN02698 Probable pectinestera 97.4 0.0043 9.3E-08 74.1 16.6 132 65-234 220-351 (497)
58 PF00295 Glyco_hydro_28: Glyco 97.2 0.046 9.9E-07 62.8 22.4 166 89-264 7-191 (326)
59 smart00656 Amb_all Amb_all dom 97.1 0.017 3.8E-07 60.5 16.6 97 102-212 11-115 (190)
60 COG5434 PGU1 Endopygalactoruna 96.8 0.058 1.2E-06 64.6 18.8 44 67-112 95-138 (542)
61 PF00544 Pec_lyase_C: Pectate 96.8 0.031 6.6E-07 59.3 14.9 112 90-211 3-128 (200)
62 PF14592 Chondroitinas_B: Chon 96.6 0.28 6E-06 56.9 21.4 134 460-596 223-386 (425)
63 TIGR03804 para_beta_helix para 96.5 0.0059 1.3E-07 47.3 5.4 43 803-846 1-43 (44)
64 TIGR03804 para_beta_helix para 96.5 0.0067 1.5E-07 47.0 5.7 39 735-774 2-40 (44)
65 PF01696 Adeno_E1B_55K: Adenov 96.4 0.48 1E-05 54.1 22.1 120 221-380 120-240 (386)
66 PF12541 DUF3737: Protein of u 96.0 1 2.3E-05 48.2 20.3 33 224-258 60-92 (277)
67 PLN02793 Probable polygalactur 95.7 1.5 3.2E-05 52.4 22.7 85 338-423 179-268 (443)
68 PLN02218 polygalacturonase ADP 95.6 1.7 3.6E-05 51.6 22.6 85 338-423 194-283 (431)
69 PLN03003 Probable polygalactur 95.6 2.8 6.2E-05 49.7 24.0 40 339-378 141-180 (456)
70 PF12541 DUF3737: Protein of u 95.5 2 4.4E-05 46.1 20.1 33 457-493 191-223 (277)
71 smart00656 Amb_all Amb_all dom 95.4 0.23 5.1E-06 52.1 13.1 66 315-380 33-114 (190)
72 PF00295 Glyco_hydro_28: Glyco 94.9 2 4.4E-05 49.4 20.1 98 214-341 93-191 (326)
73 PLN03010 polygalacturonase 94.7 11 0.00024 44.5 25.5 73 362-435 160-236 (409)
74 PLN02155 polygalacturonase 94.6 2.7 5.9E-05 49.3 20.1 86 338-424 147-237 (394)
75 PLN02188 polygalacturonase/gly 94.5 0.99 2.1E-05 53.1 16.3 126 407-559 157-287 (404)
76 PF12708 Pectate_lyase_3: Pect 94.2 0.49 1.1E-05 51.0 12.5 28 315-342 114-141 (225)
77 PF00544 Pec_lyase_C: Pectate 93.5 1.2 2.7E-05 47.1 13.3 116 213-354 75-200 (200)
78 PLN02682 pectinesterase family 93.1 8.9 0.00019 44.2 20.1 85 167-257 158-249 (369)
79 PLN02480 Probable pectinestera 92.5 1.2 2.6E-05 50.9 12.2 86 166-257 126-218 (343)
80 PF08480 Disaggr_assoc: Disagg 92.5 0.96 2.1E-05 45.7 9.8 89 277-381 3-110 (198)
81 PF08480 Disaggr_assoc: Disagg 91.1 1.4 3.1E-05 44.6 9.3 93 224-335 4-110 (198)
82 COG3866 PelB Pectate lyase [Ca 90.9 14 0.0003 40.7 17.1 67 315-381 118-199 (345)
83 PRK10531 acyl-CoA thioesterase 90.5 4.7 0.0001 47.2 14.3 87 167-258 201-304 (422)
84 PLN02773 pectinesterase 90.3 6.2 0.00014 44.7 14.8 86 167-258 97-184 (317)
85 PLN02634 probable pectinestera 90.2 15 0.00032 42.3 17.7 85 167-257 144-235 (359)
86 PLN02671 pectinesterase 89.9 25 0.00054 40.5 19.2 85 167-257 149-239 (359)
87 COG3866 PelB Pectate lyase [Ca 89.7 13 0.00028 40.9 15.7 69 476-552 118-200 (345)
88 smart00722 CASH Domain present 89.4 5.7 0.00012 39.2 12.6 62 608-671 77-144 (146)
89 PLN02665 pectinesterase family 89.2 25 0.00055 40.7 18.8 82 172-258 153-241 (366)
90 smart00722 CASH Domain present 88.6 5.1 0.00011 39.5 11.6 20 405-424 93-112 (146)
91 PLN02432 putative pectinestera 87.8 24 0.00052 39.6 16.9 85 167-257 89-174 (293)
92 PF01095 Pectinesterase: Pecti 86.7 25 0.00055 39.7 16.7 84 167-258 82-169 (298)
93 COG5434 PGU1 Endopygalactoruna 86.7 7.4 0.00016 47.1 13.0 88 291-379 239-341 (542)
94 PLN02933 Probable pectinestera 84.8 80 0.0017 38.6 20.3 85 167-257 300-386 (530)
95 PLN02916 pectinesterase family 84.6 56 0.0012 39.5 18.8 85 167-257 272-358 (502)
96 PLN02201 probable pectinestera 84.1 99 0.0022 37.7 20.8 81 172-257 292-374 (520)
97 PLN02995 Probable pectinestera 83.7 75 0.0016 39.0 19.8 81 172-257 311-393 (539)
98 PLN02497 probable pectinestera 83.5 24 0.00052 40.2 14.5 81 172-257 114-203 (331)
99 PRK09752 adhesin; Provisional 83.3 23 0.0005 46.3 15.5 68 290-358 112-193 (1250)
100 PLN02176 putative pectinestera 82.3 32 0.00068 39.5 14.9 81 172-257 121-209 (340)
101 PLN02170 probable pectinestera 82.2 1.1E+02 0.0023 37.4 19.9 82 172-258 312-395 (529)
102 PRK09752 adhesin; Provisional 81.9 41 0.00088 44.2 16.9 10 1011-1020 156-165 (1250)
103 PLN02488 probable pectinestera 81.3 73 0.0016 38.5 17.9 81 172-257 283-365 (509)
104 PLN02304 probable pectinestera 80.7 51 0.0011 38.3 15.9 81 172-257 161-248 (379)
105 PLN02217 probable pectinestera 79.9 57 0.0012 40.9 17.0 85 167-257 332-418 (670)
106 PLN02314 pectinesterase 76.8 1E+02 0.0022 38.3 18.1 81 172-257 364-446 (586)
107 PLN02745 Putative pectinestera 76.0 49 0.0011 41.1 14.9 85 167-257 367-453 (596)
108 PLN02713 Probable pectinestera 74.2 56 0.0012 40.3 14.7 85 167-257 335-421 (566)
109 PLN02990 Probable pectinestera 71.7 1.1E+02 0.0024 38.0 16.4 85 167-257 342-428 (572)
110 PLN03043 Probable pectinestera 71.0 80 0.0017 38.8 15.0 81 172-257 312-394 (538)
111 PLN02484 probable pectinestera 70.4 47 0.001 41.2 12.9 81 172-257 359-441 (587)
112 PLN02416 probable pectinestera 70.0 62 0.0013 39.7 13.7 85 167-257 312-398 (541)
113 PLN02301 pectinesterase/pectin 69.3 89 0.0019 38.4 14.8 81 172-257 322-404 (548)
114 PLN02708 Probable pectinestera 68.7 64 0.0014 39.8 13.5 80 172-256 329-410 (553)
115 PLN02506 putative pectinestera 67.8 90 0.002 38.3 14.5 81 172-257 318-400 (537)
116 PF03718 Glyco_hydro_49: Glyco 66.8 2.1E+02 0.0046 34.6 16.4 110 169-288 325-441 (582)
117 PLN02468 putative pectinestera 66.5 1.4E+02 0.0029 37.1 15.7 85 167-257 340-426 (565)
118 PLN02698 Probable pectinestera 62.8 59 0.0013 39.5 11.6 81 172-257 269-351 (497)
119 PLN02313 Pectinesterase/pectin 62.4 85 0.0018 39.1 13.0 81 172-257 361-443 (587)
120 PLN02197 pectinesterase 62.4 42 0.0009 41.5 10.3 85 167-257 359-445 (588)
121 PF03718 Glyco_hydro_49: Glyco 50.3 4.1E+02 0.0088 32.3 15.1 89 199-299 329-424 (582)
122 PRK09718 hypothetical protein; 49.1 32 0.0007 40.7 6.0 31 225-258 126-156 (512)
123 smart00710 PbH1 Parallel beta- 44.5 27 0.00058 22.5 2.8 17 1057-1073 5-21 (26)
124 PRK09718 hypothetical protein; 42.0 53 0.0012 39.0 6.3 16 370-385 228-243 (512)
125 PRK10123 wcaM putative colanic 29.2 5.2E+02 0.011 28.4 10.7 11 90-100 58-68 (464)
No 1
>KOG1777|consensus
Probab=100.00 E-value=6.5e-72 Score=595.58 Aligned_cols=463 Identities=69% Similarity=1.129 Sum_probs=444.4
Q ss_pred CchHHHHHhhhcceeecCCCcccccCCCCCCCCcchHHHHHhcCcccCCCccEEEEeCceeeeeEEEECcceEEEecCCC
Q psy675 38 NPWKESFRQLYRGIHVRPGYKAVTSDPGRKLAHFDTIQAALDHGDELGQSAPLVFVHSGVYRGEFLVLDSDVIIIGAAPG 117 (1175)
Q Consensus 38 ~~w~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~tIq~Al~~a~~gd~~~~~I~v~~G~Y~e~~l~I~k~v~l~G~g~g 117 (1175)
|||||||+|||||+||||..+++.. ....++|++|++||..+.+.+ .+.+||||+|+|+.|.|.|+++|+|+|+.|+
T Consensus 1 NPWKEs~~Ql~rGvHV~~~~~~~~~--~~~~~~fD~iEea~~~l~e~~-~e~LIFlH~G~~e~~~i~I~sdvqiiGAs~~ 77 (625)
T KOG1777|consen 1 NPWKESFRQLYRGVHVMKNPEQFVG--AANIQCFDHIEEALRFLDEND-EEKLIFLHEGTHETETIRITSDVQIIGASPS 77 (625)
T ss_pred CchHHHHHHHhccceeccCHHHhhh--hhhhHhhhhHHHHhhhccccc-ccceEEEEeccccceEEEEcCCeeEeccCCc
Confidence 7999999999999999999998876 679999999999999998875 5789999999999889999999999999999
Q ss_pred CcceeEEEecCCCceEEEecCceeeEEeeEEEEeCCCCCccccccceeEEEECCCcceEEeeeEEEeCCCCCeEEEEEcc
Q psy675 118 NVAESVILERDTESTVMFVEGAKNAYLGHVTLKFSPEAPSTVQHHKHYCLEVGEHATPTIDHCIIRSTSVVGAAVCVSGV 197 (1175)
Q Consensus 118 ~~~~~v~i~~~~~~~v~~~~g~~~~~l~~lti~~~~~~~~~~~~~~~~~i~v~~~~~~~i~~c~i~~~~~~g~~v~v~g~ 197 (1175)
.++++|+|++..+++|+|++ +++++.+|+++.++ +.+++|.|+.+..++.+.+++|.|++....|.++++.|+
T Consensus 78 dia~sVvle~~~~t~l~F~~---~AY~Gy~Tvkf~~d----~~h~~h~~ld~~~d~~p~ie~c~i~s~~~~g~Avcv~g~ 150 (625)
T KOG1777|consen 78 DIATSVVLEGRHATTLEFQE---SAYVGYVTVKFEPD----QEHHAHVCLDIEVDASPAIEECIIRSTGGVGAAVCVPGE 150 (625)
T ss_pred cceeeEEEecccccEEEEee---cceEEEEEEEeccc----cccceeEEEeeccCCCcccccccccCCCccCcccccCCc
Confidence 99999999999999999984 79999999999986 346678999999999999999999999888999999986
Q ss_pred CccceEeeeeEecCcceeEEEeeceeEEEEeeEEEecCceeEEEeccCcceEEecEEEecccceEEEecCCCc-------
Q psy675 198 CASPTLRHCDISDCENVGLYVTDYAQGLYEDNEISRNALAGIWVKNYANPIMRRNHIHHGRDVGIFTFDNGHI------- 270 (1175)
Q Consensus 198 ~a~~~i~~c~i~~~~~~GI~v~~~s~~~ie~c~i~~~~~~gI~v~~~a~~~i~~~~I~~~~~~GI~~~~~g~g------- 270 (1175)
+.|+++.|.++|+...|+++++.+++.+|+|+|++++.++|||.+.+.+++++|++++.++.||+.++.|+|
T Consensus 151 -a~P~~~~c~isDceNvglyvTd~a~g~yEh~ei~~NalA~vwvknha~p~~R~~~ih~G~dvGiftf~hg~Gy~e~cd~ 229 (625)
T KOG1777|consen 151 -AEPEIKLCAISDCENVGLYVTDHAQGIYEHCEISRNALAGVWVKNHAFPTMRNCTIHHGRDVGIFTFEHGQGYFESCDI 229 (625)
T ss_pred -cCcceeecccccCcceeEEEEeccccceecchhccccccceeeccccChhhhhceeecCCccceEEeccCcCCCccchH
Confidence 899999999999999999999999999999999999999999999999999999999999999999999887
Q ss_pred ------------------------------------------------------ccccCCcceEecceeeecccccEEEE
Q psy675 271 ------------------------------------------------------FPISNSNPTIRRNEIYNGHQGGVYIF 296 (1175)
Q Consensus 271 ------------------------------------------------------~~~~~s~~~i~~n~I~~~~~~GI~v~ 296 (1175)
|++++++|||++|+|....+.|+|++
T Consensus 230 ~qnlisg~eVkf~anp~~~rcevhh~~~ggi~vhedG~GqF~en~iyan~fAgvwits~snPTir~~eI~~G~qggvyI~ 309 (625)
T KOG1777|consen 230 HQNLISGIEVKFRANPIVLRCEVHHGKTGGIYVHEDGLGQFLENSIYANNFAGVWITSNSNPTIRQNEIIFGAQGGVYIF 309 (625)
T ss_pred HHhhhcceEEEeeccceEEEEEEeeCCCCcEEEeecchhhhhhhhhhccccceeeeeccCCCcceeeeEEecccceEEEE
Confidence 88999999999999999999999999
Q ss_pred ecCceEEEeeEEEecccccEEEecCCCceEEceEEEcCccccEEEEecceeEEeeeEEeecceeeEEEecCCCceEeeeE
Q psy675 297 GEGRGLIEHNNIYGNALAGIQIRTSSDPIVRHNKIHHGQHGGVYVHEKGVGLIEENEVYANTLAGVWITTGSAPVLRRNR 376 (1175)
Q Consensus 297 ~~~~~~i~~n~I~~n~~~GI~i~~~s~~~i~~n~i~~~~~~GI~v~~~s~~~i~~n~i~~n~~~GI~v~~~s~~~i~~n~ 376 (1175)
+.+++.++.|.+.++...||+|..+++|+++.|+|++....|||++..+++.++.|+++++..+||++..++.|.++.|+
T Consensus 310 ~~~rG~fe~n~i~~n~llgIqIr~~s~PIVr~nkI~Dg~hggi~vHr~gkGLieenkvy~n~lagi~vtTGstP~lR~n~ 389 (625)
T KOG1777|consen 310 GDGRGLFEFNEIYGNALLGIQIRTNSTPIVRYNKIHDGAHGGIYVHRKGKGLIEENKVYGNTLAGIWVTTGSTPDLRANR 389 (625)
T ss_pred eccccceehhhhhchhhhhhhhhcCCCceeeechhhccccccEEEehhcccceecchHhhhhhheeEecCCCCHhHhhhc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEeCceeeEEEEeCCeeEEeeceeeccceecEEEecCCccEEeccEEeCCCCCcEEEEeCceeeEEeeEEecccccCEEE
Q psy675 377 IHSGKQVGVYFYDNGHGKLEDNDIFNHLYSGVQIRTGSNPIIRGNKIWGGQNGGVLVYNGGLGLLEQNEIFDNAMAGVWI 456 (1175)
Q Consensus 377 i~~~~~~GI~v~~~~~~~i~~n~I~~n~~~GI~i~~~s~~~i~~n~i~~~~~~GI~l~~~~~~~i~~n~I~~n~~~GI~i 456 (1175)
++.+++.||++++.+...+++|+|.++.++|++++.+++|.+++|+||+.+ .||++++++.+.+|+|+|.+|++.||||
T Consensus 390 ihSGkq~GVyFydng~glle~ndi~~~~ysgvqirtGsNP~i~~NkIWggq-NGvLVyn~G~Gc~E~NeIFDNaMagVwI 468 (625)
T KOG1777|consen 390 IHSGKQVGVYFYDNGHGLLEQNDIRNHKYSGVQIRTGSNPKIRRNKIWGGQ-NGVLVYNGGLGCLEDNEIFDNAMAGVWI 468 (625)
T ss_pred ccccceeEEEEEeCCcchhhhhhhhhccccceEeecCCCCeeeecceecCc-ccEEEEcCcccccccccchhhhhcceEE
Confidence 999999999999999999999999999999999999999999999999986 6799999999999999999999999999
Q ss_pred eecCCceEeeeeEEcCCCccEEEEeCceeEEeeceeeccccccEEEeecCCceEeeeEEec
Q psy675 457 KTESNPTLKRNKIFDGRDGGICIFNGGKGVLEENDIFRNAQAGVLISTQSHPMLRRNRIFD 517 (1175)
Q Consensus 457 ~~~s~~~i~~n~i~~~~~~GI~i~~~~~~~i~~n~i~~n~~~GI~v~~~~~~~i~~n~I~~ 517 (1175)
+..++|++++|+|.+.++.||++++++++.+++|+|..|. ++ ..+.|.+++|+|.+
T Consensus 469 KTds~PtlrRNKI~dgRdgGicifngGkGlle~neif~Na----li-t~S~psLr~Nri~~ 524 (625)
T KOG1777|consen 469 KTDSNPTLRRNKIYDGRDGGICIFNGGKGLLEHNEIFRNA----LI-TDSAPSLRRNRIHD 524 (625)
T ss_pred ecCCCcceeecceecCCCCcEEEecCCceeeechhhhhcc----cc-ccCChhhhcccccc
Confidence 9999999999999999999999999999999999999987 34 67899999999987
No 2
>KOG1777|consensus
Probab=100.00 E-value=2e-42 Score=370.02 Aligned_cols=407 Identities=49% Similarity=0.824 Sum_probs=377.1
Q ss_pred CeeEEeeceeeccc--eecEEEecCCccEEeccEEeCCCCCcEEEEeCceeeEEeeEEecccccCEEEeecCCceEeeee
Q psy675 391 GHGKLEDNDIFNHL--YSGVQIRTGSNPIIRGNKIWGGQNGGVLVYNGGLGLLEQNEIFDNAMAGVWIKTESNPTLKRNK 468 (1175)
Q Consensus 391 ~~~~i~~n~I~~n~--~~GI~i~~~s~~~i~~n~i~~~~~~GI~l~~~~~~~i~~n~I~~n~~~GI~i~~~s~~~i~~n~ 468 (1175)
+...++.|.|..-. +.++.+.+.+.|.+..+.++++...|+++.+.+.+.+|.|+|..|+.+|||+.+.+.|++++|+
T Consensus 126 ~~p~ie~c~i~s~~~~g~Avcv~g~a~P~~~~c~isDceNvglyvTd~a~g~yEh~ei~~NalA~vwvknha~p~~R~~~ 205 (625)
T KOG1777|consen 126 ASPAIEECIIRSTGGVGAAVCVPGEAEPEIKLCAISDCENVGLYVTDHAQGIYEHCEISRNALAGVWVKNHAFPTMRNCT 205 (625)
T ss_pred CCcccccccccCCCccCcccccCCccCcceeecccccCcceeEEEEeccccceecchhccccccceeeccccChhhhhce
Confidence 33445555444432 2345556678899999999999999999999999999999999999999999999999999999
Q ss_pred EEcCCCccEEEEeCceeEEeeceeeccccccEEEeecCCceEeeeEEecCceeeEEEeCCCCccccccccceEEeeeeEe
Q psy675 469 IFDGRDGGICIFNGGKGVLEENDIFRNAQAGVLISTQSHPMLRRNRIFDGFAAGVEITNTPLSNLLINKENGFFEANDIH 548 (1175)
Q Consensus 469 i~~~~~~GI~i~~~~~~~i~~n~i~~n~~~GI~v~~~~~~~i~~n~I~~~~~~GI~i~~~~~~~~~~~~~n~~v~~n~i~ 548 (1175)
++..++.||..+..+.+-.+.|.+..+...|+.|...++|.+.+|.+......||++...+. ..|-+|++.
T Consensus 206 ih~G~dvGiftf~hg~Gy~e~cd~~qnlisg~eVkf~anp~~~rcevhh~~~ggi~vhedG~---------GqF~en~iy 276 (625)
T KOG1777|consen 206 IHHGRDVGIFTFEHGQGYFESCDIHQNLISGIEVKFRANPIVLRCEVHHGKTGGIYVHEDGL---------GQFLENSIY 276 (625)
T ss_pred eecCCccceEEeccCcCCCccchHHHhhhcceEEEeeccceEEEEEEeeCCCCcEEEeecch---------hhhhhhhhh
Confidence 99999999999999999999999999999999999999999999999998888999998887 889999999
Q ss_pred ccccceEEEeeccCcceeeeeEeecccccEEEEecCceEEecceeccCccceEEEecCCCcEEecceEEecccccEEEeC
Q psy675 549 NNRIAGFEVKAGANPTVVHCEIHHGQTGGIYVHENGLGQFIDNRIHSNNFAGVWITSNSNPTIRRNEIYNGHQGGVYIFG 628 (1175)
Q Consensus 549 ~n~~~Gi~v~~~~~~~i~~n~i~~n~~~GI~i~~~~~~~i~~n~i~~n~~~GI~i~~~~~~~i~~N~I~~n~~~GI~i~~ 628 (1175)
.|.+.|+++.+.++|+++.|.|......|+++.+.+++.|+.|.+.+|..-||++...+.|.++.|+|.+....||++..
T Consensus 277 an~fAgvwits~snPTir~~eI~~G~qggvyI~~~~rG~fe~n~i~~n~llgIqIr~~s~PIVr~nkI~Dg~hggi~vHr 356 (625)
T KOG1777|consen 277 ANNFAGVWITSNSNPTIRQNEIIFGAQGGVYIFGDGRGLFEFNEIYGNALLGIQIRTNSTPIVRYNKIHDGAHGGIYVHR 356 (625)
T ss_pred ccccceeeeeccCCCcceeeeEEecccceEEEEeccccceehhhhhchhhhhhhhhcCCCceeeechhhccccccEEEeh
Confidence 99999999999999999999999998999999999999999999999999999999999999999999999999999999
Q ss_pred CceEEEEeeEEEcceecCEEEeccCCCeEeeeEEeecccccEEEEecCccEEecceeeccccceEEeeeceeeeecCCcC
Q psy675 629 EGRGLIEHNNIYGNALAGIQIRTSSDPIVRHNKIHHGQHGGVYVHEKGVGLIEENEGKENQLLIFIRFLQIKLIPRARKT 708 (1175)
Q Consensus 629 ~~~~~i~~N~i~~n~~~GI~i~~ss~~~i~~N~I~~n~~~GI~v~~~~~~~I~~N~i~~N~~~g~~~~~s~~~~~~~~~~ 708 (1175)
.+.++|+.|++++|..+||++...+.|.++.|.++.....|+|+.+...+.+++|.|..+.
T Consensus 357 ~gkGLieenkvy~n~lagi~vtTGstP~lR~n~ihSGkq~GVyFydng~glle~ndi~~~~------------------- 417 (625)
T KOG1777|consen 357 KGKGLIEENKVYGNTLAGIWVTTGSTPDLRANRIHSGKQVGVYFYDNGHGLLEQNDIRNHK------------------- 417 (625)
T ss_pred hcccceecchHhhhhhheeEecCCCCHhHhhhcccccceeEEEEEeCCcchhhhhhhhhcc-------------------
Confidence 9999999999999999999999999999999999999999999999888899999987764
Q ss_pred ccCEEEEecCCCEEEceEEEcCCcccEEEEeCCccEEeceEEEecccccEEEEccCccEEeceEEEcCCCccEEEEcCce
Q psy675 709 YSGVQIRTGSNPIIRGNKIWGGQNGGVLVYNGGLGLLEQNEIFDNAMAGVWIKTESNPTLKRNKIFDGRDGGICIFNGGK 788 (1175)
Q Consensus 709 ~~GI~i~~~~~~~i~~N~I~~n~~~GI~l~~~~~~~i~~N~i~~N~~~GI~v~~~~~~~i~~N~I~~n~~~GI~i~~~~~ 788 (1175)
++|+++..++++.|+.|+||++++ ||++++++.+-+++|+|++|.++|||++..++|+++.|+|++.++.||+++++++
T Consensus 418 ysgvqirtGsNP~i~~NkIWggqN-GvLVyn~G~Gc~E~NeIFDNaMagVwIKTds~PtlrRNKI~dgRdgGicifngGk 496 (625)
T KOG1777|consen 418 YSGVQIRTGSNPKIRRNKIWGGQN-GVLVYNGGLGCLEDNEIFDNAMAGVWIKTDSNPTLRRNKIYDGRDGGICIFNGGK 496 (625)
T ss_pred ccceEeecCCCCeeeecceecCcc-cEEEEcCcccccccccchhhhhcceEEecCCCcceeecceecCCCCcEEEecCCc
Confidence 589999999999999999999765 6999999999999999999999999999999999999999999999999999999
Q ss_pred eEEEcceEeeeccCcEEEecCCCceEEeeeeecCccccEEEecCccceeecceEEecc
Q psy675 789 GVLEENDIFRNAQAGVLISTQSHPMLRRNRIFDGFAAGVEITNNATATLEDNQIFNNR 846 (1175)
Q Consensus 789 ~~i~~N~i~~N~~~Gi~l~~~~~~~i~~N~I~~n~~~GI~i~~~~~~~v~~N~i~~N~ 846 (1175)
+++++|+|++|+ ++ ..+.|.++.|+|.+ -.+|+|++|.
T Consensus 497 Glle~neif~Na----li-t~S~psLr~Nri~~---------------~~~N~iydN~ 534 (625)
T KOG1777|consen 497 GLLEHNEIFRNA----LI-TDSAPSLRRNRIHD---------------ERGNQIYDNL 534 (625)
T ss_pred eeeechhhhhcc----cc-ccCChhhhcccccc---------------ccccccccch
Confidence 999999999996 34 78899999999998 3467888875
No 3
>TIGR03808 RR_plus_rpt_1 twin-arg-translocated uncharacterized repeat protein. Members of this protein family have a Sec-independent twin-arginine tranlocation (TAT) signal sequence, which enables tranfer of proteins folded around prosthetic groups to cross the plasma membrane. These proteins have four copies of a repeat of about 23 amino acids that resembles the beta-helix repeat. Beta-helix refers to a structural motif in which successive beta strands wind around to stack parallel in a right-handed helix, as in AlgG and related enzymes of carbohydrate metabolism. The twin-arginine motif suggests that members of this protein family bind some unknown cofactor.
Probab=99.93 E-value=2e-23 Score=233.62 Aligned_cols=356 Identities=19% Similarity=0.222 Sum_probs=231.6
Q ss_pred CCcchHHHHHhcCcccCCCccEEEEeCceeeeeEEEECcceEEEecCCCCcceeEEEecCCCceEEEecCceeeEEeeEE
Q psy675 69 AHFDTIQAALDHGDELGQSAPLVFVHSGVYRGEFLVLDSDVIIIGAAPGNVAESVILERDTESTVMFVEGAKNAYLGHVT 148 (1175)
Q Consensus 69 ~~~~tIq~Al~~a~~gd~~~~~I~v~~G~Y~e~~l~I~k~v~l~G~g~g~~~~~v~i~~~~~~~v~~~~g~~~~~l~~lt 148 (1175)
..-+.||+||++|.+++ .+|.|+||+|++.+|+|+||++|.|+ ++. +..++.+. ..+.+..+++++.|++|+
T Consensus 52 d~T~ALQaAIdaAa~gG---~tV~Lp~G~Y~~G~L~L~spltL~G~-~gA--t~~vIdG~--~~lIiai~A~nVTIsGLt 123 (455)
T TIGR03808 52 DQTRALQRAIDEAARAQ---TPLALPPGVYRTGPLRLPSGAQLIGV-RGA--TRLVFTGG--PSLLSSEGADGIGLSGLT 123 (455)
T ss_pred hHHHHHHHHHHHhhcCC---CEEEECCCceecccEEECCCcEEEec-CCc--EEEEEcCC--ceEEEEecCCCeEEEeeE
Confidence 35578999999998553 48999999997449999999999997 443 23456665 334444458999999999
Q ss_pred EEeCCCCCccccccceeEEEECCCcceEEeeeEEEeCCCCCeEEEEEccCccceEeeeeEecCcceeEEEeeceeEEEEe
Q psy675 149 LKFSPEAPSTVQHHKHYCLEVGEHATPTIDHCIIRSTSVVGAAVCVSGVCASPTLRHCDISDCENVGLYVTDYAQGLYED 228 (1175)
Q Consensus 149 i~~~~~~~~~~~~~~~~~i~v~~~~~~~i~~c~i~~~~~~g~~v~v~g~~a~~~i~~c~i~~~~~~GI~v~~~s~~~ie~ 228 (1175)
|++++.+.+..+ .+|++.+ ...++|++|+|.++.+.||++.... ..+++
T Consensus 124 IdGsG~dl~~rd-----------------------------AgI~v~~-a~~v~Iedn~L~gsg~FGI~L~~~~-~~I~~ 172 (455)
T TIGR03808 124 LDGGGIPLPQRR-----------------------------GLIHCQG-GRDVRITDCEITGSGGNGIWLETVS-GDISG 172 (455)
T ss_pred EEeCCCcccCCC-----------------------------CEEEEcc-CCceEEEeeEEEcCCcceEEEEcCc-ceEec
Confidence 999885432211 2344432 3466677777776655777777655 67777
Q ss_pred eEEEecCceeEEEeccCcceEEecEEEecccceEEEecCCCcccccCCcceEecceeee---------cccccEEEEecC
Q psy675 229 NEISRNALAGIWVKNYANPIMRRNHIHHGRDVGIFTFDNGHIFPISNSNPTIRRNEIYN---------GHQGGVYIFGEG 299 (1175)
Q Consensus 229 c~i~~~~~~gI~v~~~a~~~i~~~~I~~~~~~GI~~~~~g~g~~~~~s~~~i~~n~I~~---------~~~~GI~v~~~~ 299 (1175)
++|.+....+|++.....+.+++|+|.+.++.||.+.... ....-..+.+|.+.+ ..++||.++...
T Consensus 173 N~I~g~~~~~I~lw~S~g~~V~~N~I~g~RD~gi~i~r~~----~~~dg~~v~~n~i~~i~a~~gg~~~~GNGI~~~~a~ 248 (455)
T TIGR03808 173 NTITQIAVTAIVSFDALGLIVARNTIIGANDNGIEILRSA----IGDDGTIVTDNRIEDIKAGPGGSGQYGNAINAFRAG 248 (455)
T ss_pred ceEeccccceEEEeccCCCEEECCEEEccCCCCeEEEEee----ecCCcceeeccccccccccCCCcCCccccEEEEccC
Confidence 7777777777777777777777777777777777664321 111223556666655 368999999999
Q ss_pred ceEEEeeEEEecccccEEEecCCCceEEceEEEcCccccEEEEecce-eEEeeeEEeecceeeEEEecC----CCceEee
Q psy675 300 RGLIEHNNIYGNALAGIQIRTSSDPIVRHNKIHHGQHGGVYVHEKGV-GLIEENEVYANTLAGVWITTG----SAPVLRR 374 (1175)
Q Consensus 300 ~~~i~~n~I~~n~~~GI~i~~~s~~~i~~n~i~~~~~~GI~v~~~s~-~~i~~n~i~~n~~~GI~v~~~----s~~~i~~ 374 (1175)
.++|++|+|+++.++||++..+++.++++|++++.+..|||.+.... ..+++|.+.++. .|+.+..- .-.++.+
T Consensus 249 ~v~V~gN~I~~~r~dgI~~nsss~~~i~~N~~~~~R~~alhymfs~~g~~i~~N~~~g~~-~G~av~nf~~ggr~~~~~g 327 (455)
T TIGR03808 249 NVIVRGNRIRNCDYSAVRGNSASNIQITGNSVSDVREVALYSEFAFEGAVIANNTVDGAA-VGVSVCNFNEGGRLAVVQG 327 (455)
T ss_pred CeEEECCEEeccccceEEEEcccCcEEECcEeeeeeeeEEEEEEeCCCcEEeccEEecCc-ceEEEEeecCCceEEEEec
Confidence 99999999999999999999999999999999998866999999888 889999999987 78887642 2235555
Q ss_pred eEEEeCceeeEEEEeCCeeEEeeceeeccceecEEEecCCccEEeccEEeCCCCCcEEEEeCc---eeeEEeeEEeccc-
Q psy675 375 NRIHSGKQVGVYFYDNGHGKLEDNDIFNHLYSGVQIRTGSNPIIRGNKIWGGQNGGVLVYNGG---LGLLEQNEIFDNA- 450 (1175)
Q Consensus 375 n~i~~~~~~GI~v~~~~~~~i~~n~I~~n~~~GI~i~~~s~~~i~~n~i~~~~~~GI~l~~~~---~~~i~~n~I~~n~- 450 (1175)
|.|++-...+-+=. --+ ...||-+.-.++..+.+|.|.+....||.+.... ...+.+|.|.+..
T Consensus 328 n~irn~~~~~p~~~------~~~------~~~g~gi~~ead~~~~~n~~e~ap~~g~~~gwg~y~r~~~~~~n~~r~~~~ 395 (455)
T TIGR03808 328 NIIRNLIPKRPIGT------APD------DDAGIGIYVEADTAVTGNVVENAPSFGIVAGWGKYLRDVAISGNVIRNAFV 395 (455)
T ss_pred ceeeccccCCCCCC------CCC------CCCceeEEEEecceeccceecCCcceeEEecchHhhhhhhhccceeeccCc
Confidence 65554321111000 000 0112222223445555566655555555554332 2234445544431
Q ss_pred ccCEEEeecC-CceEeeeeEEcCCCccEEEE
Q psy675 451 MAGVWIKTES-NPTLKRNKIFDGRDGGICIF 480 (1175)
Q Consensus 451 ~~GI~i~~~s-~~~i~~n~i~~~~~~GI~i~ 480 (1175)
+.+|.+.+++ ...|.+|.|++.+...|.=+
T Consensus 396 g~~vs~~~~~g~~~~~~n~~~~~~~ga~~g~ 426 (455)
T TIGR03808 396 GIGVSVVDGAGTALVNNNVISETPRGAVVGL 426 (455)
T ss_pred cEEEEEecCccceEEeCccccCCCCccEeec
Confidence 2334443333 45556666665554434433
No 4
>TIGR03805 beta_helix_1 parallel beta-helix repeat-containing protein. Members of this protein family contain a tandem pair of beta-helix repeats (see TIGR03804). Each repeat is expected to consist of three beta strands that form a single turn as they form a right-handed helix of stacked beta-structure. Member proteinsa occur regularly in two-gene pairs along with another uncharacterized protein family; both protein families exhibit either lipoprotein or regular signal peptides, suggesting transit through the plasma membrane, and the two may be fused. The function of the pair is unknown.
Probab=99.83 E-value=1e-18 Score=196.57 Aligned_cols=270 Identities=21% Similarity=0.202 Sum_probs=180.9
Q ss_pred HHHHHhcCcccCCCccEEEEeCceeee-eEEEEC-cceEEEecCCCCcceeEEEecC----CCceEEEecCceeeEEeeE
Q psy675 74 IQAALDHGDELGQSAPLVFVHSGVYRG-EFLVLD-SDVIIIGAAPGNVAESVILERD----TESTVMFVEGAKNAYLGHV 147 (1175)
Q Consensus 74 Iq~Al~~a~~gd~~~~~I~v~~G~Y~e-~~l~I~-k~v~l~G~g~g~~~~~v~i~~~----~~~~v~~~~g~~~~~l~~l 147 (1175)
||+||++|+||| +|+|+||+|++ ++|.|+ ++|+|+|++++. ++|+.. .+.++.+. +++++|++|
T Consensus 1 iQ~Ai~~A~~GD----tI~l~~G~Y~~~~~l~I~~~~Iti~G~g~~~----tvid~~~~~~~~~~i~v~--a~~VtI~~l 70 (314)
T TIGR03805 1 LQEALIAAQPGD----TIVLPEGVFQFDRTLSLDADGVTIRGAGMDE----TILDFSGQVGGAEGLLVT--SDDVTLSDL 70 (314)
T ss_pred CHhHHhhCCCCC----EEEECCCEEEcceeEEEeCCCeEEEecCCCc----cEEecccCCCCCceEEEE--eCCeEEEee
Confidence 799999999999 99999999994 489998 789999988643 366542 25667666 688999999
Q ss_pred EEEeCCCCCccccccceeEEEECCCcceEEeeeEEEeCCCCCeEEEEEccCccceEeeeeEecCcceeEEEeeceeEEEE
Q psy675 148 TLKFSPEAPSTVQHHKHYCLEVGEHATPTIDHCIIRSTSVVGAAVCVSGVCASPTLRHCDISDCENVGLYVTDYAQGLYE 227 (1175)
Q Consensus 148 ti~~~~~~~~~~~~~~~~~i~v~~~~~~~i~~c~i~~~~~~g~~v~v~g~~a~~~i~~c~i~~~~~~GI~v~~~s~~~ie 227 (1175)
+++.... .+|.+.....++|+++++..... + -....+.||++......+++
T Consensus 71 tI~~~~~----------~GI~v~~s~~i~I~n~~i~~~~~-------------~------~~~~~~~GI~~~~s~~v~I~ 121 (314)
T TIGR03805 71 AVENTKG----------DGVKVKGSDGIIIRRLRVEWTGG-------------P------KSSNGAYGIYPVESTNVLVE 121 (314)
T ss_pred EEEcCCC----------CeEEEeCCCCEEEEeeEEEeccC-------------c------cccCCcceEEEeccCCEEEE
Confidence 8876432 24444444455555555442200 0 00123578888887788888
Q ss_pred eeEEEecCceeEEEeccCcceEEecEEEecccceEEEecCCCcccccCCcceEecceeeecccccEEE--------EecC
Q psy675 228 DNEISRNALAGIWVKNYANPIMRRNHIHHGRDVGIFTFDNGHIFPISNSNPTIRRNEIYNGHQGGVYI--------FGEG 299 (1175)
Q Consensus 228 ~c~i~~~~~~gI~v~~~a~~~i~~~~I~~~~~~GI~~~~~g~g~~~~~s~~~i~~n~I~~~~~~GI~v--------~~~~ 299 (1175)
+|++++....||++..+....+++|+++++. .||++ ....+..+.+|.+.++. .||++ ..+.
T Consensus 122 ~n~i~g~~d~GIyv~~s~~~~v~nN~~~~n~-~GI~i--------~~S~~~~v~~N~~~~N~-~Gi~v~~~p~~~~~~s~ 191 (314)
T TIGR03805 122 DSYVRGASDAGIYVGQSQNIVVRNNVAEENV-AGIEI--------ENSQNADVYNNIATNNT-GGILVFDLPGLPQPGGS 191 (314)
T ss_pred CCEEECCCcccEEECCCCCeEEECCEEccCc-ceEEE--------EecCCcEEECCEEeccc-eeEEEeecCCCCcCCcc
Confidence 8888888777888888888888888888776 57765 33346777888877765 57877 3455
Q ss_pred ceEEEeeEEEecccccEEEecCCCceEEceEEEc-CccccEEEEecceeEEeeeEEeecceeeEEEecCCCceEeeeEEE
Q psy675 300 RGLIEHNNIYGNALAGIQIRTSSDPIVRHNKIHH-GQHGGVYVHEKGVGLIEENEVYANTLAGVWITTGSAPVLRRNRIH 378 (1175)
Q Consensus 300 ~~~i~~n~I~~n~~~GI~i~~~s~~~i~~n~i~~-~~~~GI~v~~~s~~~i~~n~i~~n~~~GI~v~~~s~~~i~~n~i~ 378 (1175)
+..|.+|.|.++.... ..+.++.+.. ..+.||++....+.+|++|+|.++..+||++..-..+-+. .
T Consensus 192 ~~~v~~N~i~~n~~~n--------~~~~gn~v~~~~~g~Gi~i~~~~~v~I~~N~i~~n~~~~i~~~~~~~~~~~----~ 259 (314)
T TIGR03805 192 NVRVFDNIIFDNNTPN--------FAPAGSIVASVPAGTGVVVMANRDVEIFGNVISNNDTANVLISSYHSTGLP----D 259 (314)
T ss_pred ceEEECCEEECCCCCC--------CcccCCceecCCCCcEEEEEcccceEEECCEEeCCcceeEEEEecccccCC----C
Confidence 7788888887764322 2333444433 2346899998889999999999999999988642211000 0
Q ss_pred eCceeeEEEEeCCeeEEeeceeeccce
Q psy675 379 SGKQVGVYFYDNGHGKLEDNDIFNHLY 405 (1175)
Q Consensus 379 ~~~~~GI~v~~~~~~~i~~n~I~~n~~ 405 (1175)
-..+.|...+. ....|.+|++.++..
T Consensus 260 ~~~~~~~~~~~-~~v~i~~N~~~~~g~ 285 (314)
T TIGR03805 260 QPPDDGFDPYP-RNISIHDNTFSDGGT 285 (314)
T ss_pred CCcCCCccCCC-cceEEEccEeecCCC
Confidence 01123332222 456677888877653
No 5
>COG3420 NosD Nitrous oxidase accessory protein [Inorganic ion transport and metabolism]
Probab=99.83 E-value=7.3e-19 Score=185.38 Aligned_cols=261 Identities=21% Similarity=0.276 Sum_probs=198.5
Q ss_pred CcccCCCccEEEEeCceeeeeEEEECcceEEEecCCCCcceeEEEecCCCceEEEecCceeeEEeeEEEEeCCCCCcccc
Q psy675 81 GDELGQSAPLVFVHSGVYRGEFLVLDSDVIIIGAAPGNVAESVILERDTESTVMFVEGAKNAYLGHVTLKFSPEAPSTVQ 160 (1175)
Q Consensus 81 a~~gd~~~~~I~v~~G~Y~e~~l~I~k~v~l~G~g~g~~~~~v~i~~~~~~~v~~~~g~~~~~l~~lti~~~~~~~~~~~ 160 (1175)
|.||| .+.|. |+|.+ +++|++++||.|+ ++.+ .-.+.+++.|++. ++++.++||++++++...+++.
T Consensus 31 a~pgd----~~~i~-g~~~g-~~vInr~l~l~ge-~ga~----l~g~g~G~~vtv~--aP~~~v~Gl~vr~sg~~lp~m~ 97 (408)
T COG3420 31 AKPGD----YYGIS-GRYAG-NFVINRALTLRGE-NGAV----LDGGGKGSYVTVA--APDVIVEGLTVRGSGRSLPAMD 97 (408)
T ss_pred cCCCc----EEEEe-eeecc-cEEEccceeeccc-cccE----EecCCcccEEEEe--CCCceeeeEEEecCCCCccccc
Confidence 88998 99999 99998 9999999999986 4432 3334678999998 8999999999999987665532
Q ss_pred ccceeEEEECCCcceEEeeeEEEeCCCCCeEEEEEccCccceEeeeeEecCcceeEEEeeceeEEEEeeEEEecCceeEE
Q psy675 161 HHKHYCLEVGEHATPTIDHCIIRSTSVVGAAVCVSGVCASPTLRHCDISDCENVGLYVTDYAQGLYEDNEISRNALAGIW 240 (1175)
Q Consensus 161 ~~~~~~i~v~~~~~~~i~~c~i~~~~~~g~~v~v~g~~a~~~i~~c~i~~~~~~GI~v~~~s~~~ie~c~i~~~~~~gI~ 240 (1175)
++|.+.-......+|+|++.++. .||++...+...+|+++|.+-.. +.
T Consensus 98 -----------------------------agI~v~~~at~A~Vr~N~l~~n~-~Gi~l~~s~d~~i~~n~i~G~~~--~r 145 (408)
T COG3420 98 -----------------------------AGIFVGRTATGAVVRHNDLIGNS-FGIYLHGSADVRIEGNTIQGLAD--LR 145 (408)
T ss_pred -----------------------------ceEEeccCcccceEEcccccccc-eEEEEeccCceEEEeeEEeeccc--cc
Confidence 22333212234677888888775 77777777666666666665321 11
Q ss_pred EeccCcceEEecEEEecccceEEEecCCCcccccCCcceEecceeeecccccEEEEecCceEEEeeEEEecccccEEEec
Q psy675 241 VKNYANPIMRRNHIHHGRDVGIFTFDNGHIFPISNSNPTIRRNEIYNGHQGGVYIFGEGRGLIEHNNIYGNALAGIQIRT 320 (1175)
Q Consensus 241 v~~~a~~~i~~~~I~~~~~~GI~~~~~g~g~~~~~s~~~i~~n~I~~~~~~GI~v~~~~~~~i~~n~I~~n~~~GI~i~~ 320 (1175)
+ .-.+.||+++....+.|.+|+|+. ..+||++..
T Consensus 146 ---------------------~------------------------~~rGnGI~vyNa~~a~V~~ndisy-~rDgIy~~~ 179 (408)
T COG3420 146 ---------------------V------------------------AERGNGIYVYNAPGALVVGNDISY-GRDGIYSDT 179 (408)
T ss_pred ---------------------h------------------------hhccCceEEEcCCCcEEEcCcccc-ccceEEEcc
Confidence 1 014789999999999999999998 568999999
Q ss_pred CCCceEEceEEEcCccccEEEEecceeEEeeeEEeecceeeEEEecCCCceEeeeEEEeCceeeEEEEeCCeeEEeecee
Q psy675 321 SSDPIVRHNKIHHGQHGGVYVHEKGVGLIEENEVYANTLAGVWITTGSAPVLRRNRIHSGKQVGVYFYDNGHGKLEDNDI 400 (1175)
Q Consensus 321 ~s~~~i~~n~i~~~~~~GI~v~~~s~~~i~~n~i~~n~~~GI~v~~~s~~~i~~n~i~~~~~~GI~v~~~~~~~i~~n~I 400 (1175)
+....+++|++++++ .|++++......+++|.+++|. .|..++.+....+++|+-.+++++||.+.-.....+++|.+
T Consensus 180 S~~~~~~gnr~~~~R-ygvHyM~t~~s~i~dn~s~~N~-vG~ALMys~~l~V~~nrS~Gnrd~Gillnya~~s~i~~N~v 257 (408)
T COG3420 180 SQHNVFKGNRFRDLR-YGVHYMYTNDSRISDNSSRDNR-VGYALMYSDRLKVSDNRSSGNRDHGILLNYANYSRIVGNRV 257 (408)
T ss_pred cccceecccchhhee-eeEEEEeccCcEeecccccCCc-ceEEEEEeccEEEEcCcccCccccceeeeeeeccceeccEE
Confidence 999999999999998 9999999999999999999997 89999999999999999999999999987655566777766
Q ss_pred eccceec--EEEecCCccEEeccEEeCCCCCcEEEEeC
Q psy675 401 FNHLYSG--VQIRTGSNPIIRGNKIWGGQNGGVLVYNG 436 (1175)
Q Consensus 401 ~~n~~~G--I~i~~~s~~~i~~n~i~~~~~~GI~l~~~ 436 (1175)
.++. .| +.+......+|++|.+.+|. -||++...
T Consensus 258 ~g~~-~Gk~vfiyn~~~~ki~~n~feg~~-iGIhltag 293 (408)
T COG3420 258 AGNV-SGKCVFIYNANYNKIRGNSFEGCA-IGIHLTAG 293 (408)
T ss_pred Eecc-cceEEEEeccchhhhccceeecce-EEEEEecc
Confidence 6633 23 44445555555555555554 45555443
No 6
>TIGR03808 RR_plus_rpt_1 twin-arg-translocated uncharacterized repeat protein. Members of this protein family have a Sec-independent twin-arginine tranlocation (TAT) signal sequence, which enables tranfer of proteins folded around prosthetic groups to cross the plasma membrane. These proteins have four copies of a repeat of about 23 amino acids that resembles the beta-helix repeat. Beta-helix refers to a structural motif in which successive beta strands wind around to stack parallel in a right-handed helix, as in AlgG and related enzymes of carbohydrate metabolism. The twin-arginine motif suggests that members of this protein family bind some unknown cofactor.
Probab=99.62 E-value=9.1e-14 Score=156.51 Aligned_cols=270 Identities=17% Similarity=0.181 Sum_probs=186.8
Q ss_pred eeeEEEeCCCCccccccccceEEeeeeEeccccceEEEeeccCcceeeeeEeecccccEEEEecCceEEecceeccCccc
Q psy675 520 AAGVEITNTPLSNLLINKENGFFEANDIHNNRIAGFEVKAGANPTVVHCEIHHGQTGGIYVHENGLGQFIDNRIHSNNFA 599 (1175)
Q Consensus 520 ~~GI~i~~~~~~~~~~~~~n~~v~~n~i~~n~~~Gi~v~~~~~~~i~~n~i~~n~~~GI~i~~~~~~~i~~n~i~~n~~~ 599 (1175)
..+|.+..+.. ++|++|++.++..+||++.... ..+.+|+|.++...+|+++++....|++|+|.+....
T Consensus 135 dAgI~v~~a~~---------v~Iedn~L~gsg~FGI~L~~~~-~~I~~N~I~g~~~~~I~lw~S~g~~V~~N~I~g~RD~ 204 (455)
T TIGR03808 135 RGLIHCQGGRD---------VRITDCEITGSGGNGIWLETVS-GDISGNTITQIAVTAIVSFDALGLIVARNTIIGANDN 204 (455)
T ss_pred CCEEEEccCCc---------eEEEeeEEEcCCcceEEEEcCc-ceEecceEeccccceEEEeccCCCEEECCEEEccCCC
Confidence 56777754444 8999999998876799998876 8889999998888889999888899999999998888
Q ss_pred eEEEecC----CCcEEecceEEe---------cccccEEEeCCceEEEEeeEEEcceecCEEEeccCCCeEeeeEEeecc
Q psy675 600 GVWITSN----SNPTIRRNEIYN---------GHQGGVYIFGEGRGLIEHNNIYGNALAGIQIRTSSDPIVRHNKIHHGQ 666 (1175)
Q Consensus 600 GI~i~~~----~~~~i~~N~I~~---------n~~~GI~i~~~~~~~i~~N~i~~n~~~GI~i~~ss~~~i~~N~I~~n~ 666 (1175)
||++... .-..+.+|.+.+ ..+.||.++.....+|++|+|++++.+||++..+++..|++|.+++-+
T Consensus 205 gi~i~r~~~~~dg~~v~~n~i~~i~a~~gg~~~~GNGI~~~~a~~v~V~gN~I~~~r~dgI~~nsss~~~i~~N~~~~~R 284 (455)
T TIGR03808 205 GIEILRSAIGDDGTIVTDNRIEDIKAGPGGSGQYGNAINAFRAGNVIVRGNRIRNCDYSAVRGNSASNIQITGNSVSDVR 284 (455)
T ss_pred CeEEEEeeecCCcceeeccccccccccCCCcCCccccEEEEccCCeEEECCEEeccccceEEEEcccCcEEECcEeeeee
Confidence 8888643 224577777765 357899999999999999999999988999999999999999999776
Q ss_pred cccEEEEecCc-cEEecceeeccccceEEeeeceeeeecCCcCccCEEEE---ecCCC-EEEceEEEcCCcccEEEEeCC
Q psy675 667 HGGVYVHEKGV-GLIEENEGKENQLLIFIRFLQIKLIPRARKTYSGVQIR---TGSNP-IIRGNKIWGGQNGGVLVYNGG 741 (1175)
Q Consensus 667 ~~GI~v~~~~~-~~I~~N~i~~N~~~g~~~~~s~~~~~~~~~~~~GI~i~---~~~~~-~i~~N~I~~n~~~GI~l~~~~ 741 (1175)
.-+|+.+.+.. ..+++|.+.+|.. |+.+. ++..+ .+++|.|.+-...|=
T Consensus 285 ~~alhymfs~~g~~i~~N~~~g~~~--------------------G~av~nf~~ggr~~~~~gn~irn~~~~~p------ 338 (455)
T TIGR03808 285 EVALYSEFAFEGAVIANNTVDGAAV--------------------GVSVCNFNEGGRLAVVQGNIIRNLIPKRP------ 338 (455)
T ss_pred eeEEEEEEeCCCcEEeccEEecCcc--------------------eEEEEeecCCceEEEEecceeeccccCCC------
Confidence 55999999877 7888888887764 33322 11111 223333321100000
Q ss_pred ccEEeceEEEecccccEEEEccCccEEeceEEEcCCCccEEEEcCceeEEEcceEeeeccCcEEEecCCCceEEeeeeec
Q psy675 742 LGLLEQNEIFDNAMAGVWIKTESNPTLKRNKIFDGRDGGICIFNGGKGVLEENDIFRNAQAGVLISTQSHPMLRRNRIFD 821 (1175)
Q Consensus 742 ~~~i~~N~i~~N~~~GI~v~~~~~~~i~~N~I~~n~~~GI~i~~~~~~~i~~N~i~~N~~~Gi~l~~~~~~~i~~N~I~~ 821 (1175)
.++-. .+-.+-||+++ +...+.+|.|.+-..+||.+ +.|=|+. +..+++|.|.+
T Consensus 339 ~~~~~----~~~~g~gi~~e--ad~~~~~n~~e~ap~~g~~~-----------------gwg~y~r---~~~~~~n~~r~ 392 (455)
T TIGR03808 339 IGTAP----DDDAGIGIYVE--ADTAVTGNVVENAPSFGIVA-----------------GWGKYLR---DVAISGNVIRN 392 (455)
T ss_pred CCCCC----CCCCceeEEEE--ecceeccceecCCcceeEEe-----------------cchHhhh---hhhhccceeec
Confidence 00000 00112244443 55667777777777777776 3444443 34566777766
Q ss_pred Cc-cccEEEecCc-cceeecceEEeccccceE
Q psy675 822 GF-AAGVEITNNA-TATLEDNQIFNNRFGGLC 851 (1175)
Q Consensus 822 n~-~~GI~i~~~~-~~~v~~N~i~~N~~g~~~ 851 (1175)
.. +.|+.+.+.+ ++.+.+|.|.+-+.|.++
T Consensus 393 ~~~g~~vs~~~~~g~~~~~~n~~~~~~~ga~~ 424 (455)
T TIGR03808 393 AFVGIGVSVVDGAGTALVNNNVISETPRGAVV 424 (455)
T ss_pred cCccEEEEEecCccceEEeCccccCCCCccEe
Confidence 43 4566666655 456778888887777654
No 7
>COG3420 NosD Nitrous oxidase accessory protein [Inorganic ion transport and metabolism]
Probab=99.55 E-value=2.4e-13 Score=144.14 Aligned_cols=217 Identities=20% Similarity=0.322 Sum_probs=183.6
Q ss_pred ccCcceeeeeEee------cccccEEEEecC-ceEEecceeccCccceEEEecCCCcEEecceEEec-------ccccEE
Q psy675 560 GANPTVVHCEIHH------GQTGGIYVHENG-LGQFIDNRIHSNNFAGVWITSNSNPTIRRNEIYNG-------HQGGVY 625 (1175)
Q Consensus 560 ~~~~~i~~n~i~~------n~~~GI~i~~~~-~~~i~~n~i~~n~~~GI~i~~~~~~~i~~N~I~~n-------~~~GI~ 625 (1175)
..+++++++++++ ..+.||++...+ .+.++.|.+.+|.. ||++..++++.+++|+|..- .+.||+
T Consensus 76 aP~~~v~Gl~vr~sg~~lp~m~agI~v~~~at~A~Vr~N~l~~n~~-Gi~l~~s~d~~i~~n~i~G~~~~r~~~rGnGI~ 154 (408)
T COG3420 76 APDVIVEGLTVRGSGRSLPAMDAGIFVGRTATGAVVRHNDLIGNSF-GIYLHGSADVRIEGNTIQGLADLRVAERGNGIY 154 (408)
T ss_pred CCCceeeeEEEecCCCCcccccceEEeccCcccceEEcccccccce-EEEEeccCceEEEeeEEeeccccchhhccCceE
Confidence 3345566666653 236788888776 57899999999986 99999999999999999653 468999
Q ss_pred EeCCceEEEEeeEEEcceecCEEEeccCCCeEeeeEEeecccccEEEEecCccEEecceeeccccceEEeeeceeeeecC
Q psy675 626 IFGEGRGLIEHNNIYGNALAGIQIRTSSDPIVRHNKIHHGQHGGVYVHEKGVGLIEENEGKENQLLIFIRFLQIKLIPRA 705 (1175)
Q Consensus 626 i~~~~~~~i~~N~i~~n~~~GI~i~~ss~~~i~~N~I~~n~~~GI~v~~~~~~~I~~N~i~~N~~~g~~~~~s~~~~~~~ 705 (1175)
++......|.+|+|+.-. +||+...+....+++|.+++.+ +|..++......+++|...+|.
T Consensus 155 vyNa~~a~V~~ndisy~r-DgIy~~~S~~~~~~gnr~~~~R-ygvHyM~t~~s~i~dn~s~~N~---------------- 216 (408)
T COG3420 155 VYNAPGALVVGNDISYGR-DGIYSDTSQHNVFKGNRFRDLR-YGVHYMYTNDSRISDNSSRDNR---------------- 216 (408)
T ss_pred EEcCCCcEEEcCcccccc-ceEEEcccccceecccchhhee-eeEEEEeccCcEeecccccCCc----------------
Confidence 999999999999998887 5999999999999999999886 8999999888889999888876
Q ss_pred CcCccCEEEEecCCCEEEceEEEcCCcccEEEEeCCccEEeceEEEeccccc--EEEEccCccEEeceEEEcCCCccEEE
Q psy675 706 RKTYSGVQIRTGSNPIIRGNKIWGGQNGGVLVYNGGLGLLEQNEIFDNAMAG--VWIKTESNPTLKRNKIFDGRDGGICI 783 (1175)
Q Consensus 706 ~~~~~GI~i~~~~~~~i~~N~I~~n~~~GI~l~~~~~~~i~~N~i~~N~~~G--I~v~~~~~~~i~~N~I~~n~~~GI~i 783 (1175)
.|+.++.+...++++|+-+++..+||++.-.....|.+|.+..| ..| +++.......|++|.+. +...||++
T Consensus 217 ----vG~ALMys~~l~V~~nrS~Gnrd~Gillnya~~s~i~~N~v~g~-~~Gk~vfiyn~~~~ki~~n~fe-g~~iGIhl 290 (408)
T COG3420 217 ----VGYALMYSDRLKVSDNRSSGNRDHGILLNYANYSRIVGNRVAGN-VSGKCVFIYNANYNKIRGNSFE-GCAIGIHL 290 (408)
T ss_pred ----ceEEEEEeccEEEEcCcccCccccceeeeeeeccceeccEEEec-ccceEEEEeccchhhhccceee-cceEEEEE
Confidence 48899999999999999999999999998777888999988875 345 88888888999999976 56789999
Q ss_pred EcCcee-EEEcceEeeecc
Q psy675 784 FNGGKG-VLEENDIFRNAQ 801 (1175)
Q Consensus 784 ~~~~~~-~i~~N~i~~N~~ 801 (1175)
..++++ .+..|.|++|..
T Consensus 291 tagsegn~~~gNsFigNr~ 309 (408)
T COG3420 291 TAGSEGNEIIGNSFIGNRV 309 (408)
T ss_pred eccccCcEEecccccccce
Confidence 988765 688899988853
No 8
>PLN02634 probable pectinesterase
Probab=99.50 E-value=1.3e-12 Score=145.66 Aligned_cols=199 Identities=16% Similarity=0.233 Sum_probs=127.7
Q ss_pred hhheecccccCCCCCCCCceeEEcCCCCCCCCCchHHHHHhhhcceeecCCCcccccCCCCCCCCcchHHHHHhcCcccC
Q psy675 6 LYSRVFEYDMPLYNPGGSLCFEFVPPEDSDHANPWKESFRQLYRGIHVRPGYKAVTSDPGRKLAHFDTIQAALDHGDELG 85 (1175)
Q Consensus 6 l~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~tIq~Al~~a~~gd 85 (1175)
|+..+.-|+.|+.-|.. + ...+. .-+.+.+|+ +|-|........++...++|+|||+||++++++.
T Consensus 17 ~~~~~~~~~~~~~~~~~-~---------~~~~~--~~~~~~~~~--~~~~~~~~~i~Va~dGsGdf~TIQaAIda~P~~~ 82 (359)
T PLN02634 17 LSFHCLCFRFPLVAACS-A---------STDDQ--QIQHHHHHK--WVGPSGHKVITVDANGHGDFRSVQDAVDSVPKNN 82 (359)
T ss_pred HHHhhHhhcCCcceecc-c---------ccCch--hhhhccCcc--ccCCCCCccEEECCCCCCCccCHHHHHhhCcccC
Confidence 55566678999998875 2 11111 111122222 2334333322222456789999999999998876
Q ss_pred CCccEEEEeCceeeeeEEEEC--cc-eEEEecCCCCcceeEEEecC----------------CCceEEEecCceeeEEee
Q psy675 86 QSAPLVFVHSGVYRGEFLVLD--SD-VIIIGAAPGNVAESVILERD----------------TESTVMFVEGAKNAYLGH 146 (1175)
Q Consensus 86 ~~~~~I~v~~G~Y~e~~l~I~--k~-v~l~G~g~g~~~~~v~i~~~----------------~~~~v~~~~g~~~~~l~~ 146 (1175)
..+.+|+|.||+|+| .|+|+ || |+|+|+++.. ++|... ...++++. ++++..++
T Consensus 83 ~~r~vI~Ik~GvY~E-kV~Ip~~k~~ItL~G~g~~~----TiIt~~~~a~~~~~~g~~~~T~~SaTv~V~--a~~F~a~n 155 (359)
T PLN02634 83 TMSVTIKINAGFYRE-KVVVPATKPYITFQGAGRDV----TAIEWHDRASDRGANGQQLRTYQTASVTVY--ANYFTARN 155 (359)
T ss_pred CccEEEEEeCceEEE-EEEEcCCCCeEEEEecCCCc----eEEEecccccccCCCCcccccccceEEEEE--CCCeEEEe
Confidence 567799999999998 99995 45 9999998653 244211 12345554 67899999
Q ss_pred EEEEeCCCCCccc-cccceeEEEECCCcceEEeeeEEEeCCCCCeEEEEEccCccceEeeeeEecCcceeEEEeeceeEE
Q psy675 147 VTLKFSPEAPSTV-QHHKHYCLEVGEHATPTIDHCIIRSTSVVGAAVCVSGVCASPTLRHCDISDCENVGLYVTDYAQGL 225 (1175)
Q Consensus 147 lti~~~~~~~~~~-~~~~~~~i~v~~~~~~~i~~c~i~~~~~~g~~v~v~g~~a~~~i~~c~i~~~~~~GI~v~~~s~~~ 225 (1175)
|||++.....+.. ......++.+. +.+..+.+|.|.+.. .+++.. ..+-.+++|.|++.- =++.+.+.+.
T Consensus 156 iTf~Nta~~~~~g~~~~QAVAl~v~-gDra~f~~C~f~G~Q---DTL~~~--~gR~yf~~CyIeG~V---DFIFG~g~a~ 226 (359)
T PLN02634 156 ISFKNTAPAPMPGMQGWQAVAFRIS-GDKAFFFGCGFYGAQ---DTLCDD--AGRHYFKECYIEGSI---DFIFGNGRSM 226 (359)
T ss_pred CeEEeCCccCCCCCCCCceEEEEec-CCcEEEEEeEEeccc---ceeeeC--CCCEEEEeeEEcccc---cEEcCCceEE
Confidence 9999875322111 01112346655 467888888888753 456653 357888888888654 3566778888
Q ss_pred EEeeEEEec
Q psy675 226 YEDNEISRN 234 (1175)
Q Consensus 226 ie~c~i~~~ 234 (1175)
+|+|+|...
T Consensus 227 Fe~C~I~s~ 235 (359)
T PLN02634 227 YKDCELHSI 235 (359)
T ss_pred EeccEEEEe
Confidence 888888754
No 9
>PLN02480 Probable pectinesterase
Probab=99.48 E-value=2.3e-12 Score=144.05 Aligned_cols=154 Identities=15% Similarity=0.180 Sum_probs=112.0
Q ss_pred CCCCCCcchHHHHHhcCcccCCCccEEEEeCceeeeeEEEEC--cc-eEEEecCCCCcceeEEEecC-------CCceEE
Q psy675 65 GRKLAHFDTIQAALDHGDELGQSAPLVFVHSGVYRGEFLVLD--SD-VIIIGAAPGNVAESVILERD-------TESTVM 134 (1175)
Q Consensus 65 ~~~~~~~~tIq~Al~~a~~gd~~~~~I~v~~G~Y~e~~l~I~--k~-v~l~G~g~g~~~~~v~i~~~-------~~~~v~ 134 (1175)
....++|+|||+||++|++++..+.+|+|+||+|+| .|+|+ || |+|+|+++.. ++|... ...+++
T Consensus 54 ~~G~g~f~TIQ~AIdaap~~~~~~~~I~Ik~GvY~E-~V~I~~~kp~ItL~G~g~~~----TvI~~~~~~~~~~~saTvt 128 (343)
T PLN02480 54 INGKGDFTSVQSAIDAVPVGNSEWIIVHLRKGVYRE-KVHIPENKPFIFMRGNGKGR----TSIVWSQSSSDNAASATFT 128 (343)
T ss_pred CCCCCCcccHHHHHhhCccCCCceEEEEEcCcEEEE-EEEECCCCceEEEEecCCCC----eEEEccccccCCCCceEEE
Confidence 345679999999999999987566679999999998 99996 77 9999988653 355543 345666
Q ss_pred EecCceeeEEeeEEEEeCCCCCccc-cccceeEEEECCCcceEEeeeEEEeCCCCCeEEEEEccCccceEeeeeEecCcc
Q psy675 135 FVEGAKNAYLGHVTLKFSPEAPSTV-QHHKHYCLEVGEHATPTIDHCIIRSTSVVGAAVCVSGVCASPTLRHCDISDCEN 213 (1175)
Q Consensus 135 ~~~g~~~~~l~~lti~~~~~~~~~~-~~~~~~~i~v~~~~~~~i~~c~i~~~~~~g~~v~v~g~~a~~~i~~c~i~~~~~ 213 (1175)
+. ++++.+++|||++........ ......++.+. ..++.|.+|.|.+.. .+++.. ..+-.+++|.|++.-
T Consensus 129 V~--a~~f~a~nLTf~Nta~~g~~~~~~~QAVAl~v~-gDra~f~~c~f~G~Q---DTLy~~--~gR~yf~~C~IeG~V- 199 (343)
T PLN02480 129 VE--APHFVAFGISIRNDAPTGMAFTSENQSVAAFVG-ADKVAFYHCAFYSTH---NTLFDY--KGRHYYHSCYIQGSI- 199 (343)
T ss_pred EE--CCCEEEEeeEEEecCCCCCCCCCCCceEEEEec-CCcEEEEeeEEeccc---ceeEeC--CCCEEEEeCEEEeee-
Confidence 66 789999999999984211100 00112234444 468889999998854 457754 357888999988754
Q ss_pred eeEEEeeceeEEEEeeEEEec
Q psy675 214 VGLYVTDYAQGLYEDNEISRN 234 (1175)
Q Consensus 214 ~GI~v~~~s~~~ie~c~i~~~ 234 (1175)
=++.+.+.+.+|+|+|...
T Consensus 200 --DFIFG~g~a~fe~C~i~s~ 218 (343)
T PLN02480 200 --DFIFGRGRSIFHNCEIFVI 218 (343)
T ss_pred --eEEccceeEEEEccEEEEe
Confidence 4677888888999988764
No 10
>PF07602 DUF1565: Protein of unknown function (DUF1565); InterPro: IPR011459 These proteins share a region of homology in their N termini, and are found in several phylogenetically diverse bacteria and in the archaeon Methanosarcina acetivorans. Some of these proteins also contain characterised domains such as IPR001119 from INTERPRO (e.g. Q8YWJ6 from SWISSPROT) and IPR005084 from INTERPRO (e.g. Q9FBS2 from SWISSPROT).
Probab=99.47 E-value=3.3e-12 Score=135.76 Aligned_cols=143 Identities=20% Similarity=0.269 Sum_probs=93.5
Q ss_pred CCCCCCcchHHHHHhcCcccCCCccEEEEeCceeeee-----EEEECcceEEEecCCCCcceeEEEecCCCceEEEecCc
Q psy675 65 GRKLAHFDTIQAALDHGDELGQSAPLVFVHSGVYRGE-----FLVLDSDVIIIGAAPGNVAESVILERDTESTVMFVEGA 139 (1175)
Q Consensus 65 ~~~~~~~~tIq~Al~~a~~gd~~~~~I~v~~G~Y~e~-----~l~I~k~v~l~G~g~g~~~~~v~i~~~~~~~v~~~~g~ 139 (1175)
+....||+||++||++|+||+ +|+|+||+|.|+ ||.|++.|+|+|....+-...+++.+. ....
T Consensus 9 Gs~~~P~~Ti~~A~~~a~~g~----~i~l~~GtY~~~~ge~fPi~i~~gVtl~G~~~~kG~~~il~~g~-~~~~------ 77 (246)
T PF07602_consen 9 GSQSAPFKTITKALQAAQPGD----TIQLAPGTYSEATGETFPIIIKPGVTLIGNESNKGQIDILITGG-GTGP------ 77 (246)
T ss_pred CccccCHHHHHHHHHhCCCCC----EEEECCceeccccCCcccEEecCCeEEeecccCCCcceEEecCC-ceEE------
Confidence 667889999999999999998 999999999982 689999999999763221112233322 1111
Q ss_pred eeeEEeeEEEEeCCCCCccccccceeEEEECCCcceEEeeeEEEeCC-CCCeEEEEEccCccceEeeeeEecCcceeEEE
Q psy675 140 KNAYLGHVTLKFSPEAPSTVQHHKHYCLEVGEHATPTIDHCIIRSTS-VVGAAVCVSGVCASPTLRHCDISDCENVGLYV 218 (1175)
Q Consensus 140 ~~~~l~~lti~~~~~~~~~~~~~~~~~i~v~~~~~~~i~~c~i~~~~-~~g~~v~v~g~~a~~~i~~c~i~~~~~~GI~v 218 (1175)
+|.+.....+ ...+.+......+|...+|++.. ..|.+|++.+ +.++|++|+|+++...||++
T Consensus 78 --------~I~g~~~~~~------~qn~tI~~~~~~~i~GvtItN~n~~~g~Gi~Ies--s~~tI~Nntf~~~~~~GI~v 141 (246)
T PF07602_consen 78 --------TISGGGPDLS------GQNVTIILANNATISGVTITNPNIARGTGIWIES--SSPTIANNTFTNNGREGIFV 141 (246)
T ss_pred --------eEeccCcccc------ceeEEEEecCCCEEEEEEEEcCCCCcceEEEEec--CCcEEEeeEEECCccccEEE
Confidence 1222221111 01111222355677777777763 2577888864 58999999999988889988
Q ss_pred eece-eEEEEeeEEEec
Q psy675 219 TDYA-QGLYEDNEISRN 234 (1175)
Q Consensus 219 ~~~s-~~~ie~c~i~~~ 234 (1175)
...+ ...+.+..|.++
T Consensus 142 ~g~~~~~~i~~~vI~GN 158 (246)
T PF07602_consen 142 TGTSANPGINGNVISGN 158 (246)
T ss_pred EeeecCCcccceEeecc
Confidence 7774 555555554443
No 11
>PLN02682 pectinesterase family protein
Probab=99.45 E-value=4.6e-12 Score=142.03 Aligned_cols=152 Identities=17% Similarity=0.246 Sum_probs=108.6
Q ss_pred CCCCcchHHHHHhcCcccCCCccEEEEeCceeeeeEEEEC--cc-eEEEecCCCCcceeEEEecC---------------
Q psy675 67 KLAHFDTIQAALDHGDELGQSAPLVFVHSGVYRGEFLVLD--SD-VIIIGAAPGNVAESVILERD--------------- 128 (1175)
Q Consensus 67 ~~~~~~tIq~Al~~a~~gd~~~~~I~v~~G~Y~e~~l~I~--k~-v~l~G~g~g~~~~~v~i~~~--------------- 128 (1175)
..++|+|||+||++++.....+.+|+|+||+|+| .|+|+ || |+|+|+++.. ++|...
T Consensus 78 gsGdf~TIQ~AIdavP~~~~~r~vI~Ik~G~Y~E-kV~Ip~~k~~Itl~G~g~~~----TiIt~~~~a~~~~~~g~~~gT 152 (369)
T PLN02682 78 AAGDFTTIQAAIDSLPVINLVRVVIKVNAGTYRE-KVNIPPLKAYITLEGAGADK----TIIQWGDTADTPGPGGRPLGT 152 (369)
T ss_pred CCCCccCHHHHHhhccccCCceEEEEEeCceeeE-EEEEeccCceEEEEecCCCc----cEEEeccccCccCCCCCcccc
Confidence 5689999999999998876567899999999998 89995 55 9999998654 245311
Q ss_pred -CCceEEEecCceeeEEeeEEEEeCCCCCcccc-ccceeEEEECCCcceEEeeeEEEeCCCCCeEEEEEccCccceEeee
Q psy675 129 -TESTVMFVEGAKNAYLGHVTLKFSPEAPSTVQ-HHKHYCLEVGEHATPTIDHCIIRSTSVVGAAVCVSGVCASPTLRHC 206 (1175)
Q Consensus 129 -~~~~v~~~~g~~~~~l~~lti~~~~~~~~~~~-~~~~~~i~v~~~~~~~i~~c~i~~~~~~g~~v~v~g~~a~~~i~~c 206 (1175)
..+++.+. ++++.+++|||+++....+... .+...++.+. +.+..+.+|.|.+.. .+++.. ..+-.+++|
T Consensus 153 ~~SAT~~v~--a~~F~a~nlTf~Nt~~~~~~g~~g~QAVAL~v~-gDr~~fy~C~f~G~Q---DTLy~~--~gRqyf~~C 224 (369)
T PLN02682 153 YGSATFAVN--SPYFIAKNITFKNTAPVPPPGALGKQAVALRIS-ADTAAFYGCKFLGAQ---DTLYDH--LGRHYFKDC 224 (369)
T ss_pred ccceEEEEE--CCCeEEEeeEEEcccccCCCCCCcccEEEEEec-CCcEEEEcceEeccc---cceEEC--CCCEEEEee
Confidence 11345454 6899999999998753221111 1112345555 467888899988864 457764 357888888
Q ss_pred eEecCcceeEEEeeceeEEEEeeEEEec
Q psy675 207 DISDCENVGLYVTDYAQGLYEDNEISRN 234 (1175)
Q Consensus 207 ~i~~~~~~GI~v~~~s~~~ie~c~i~~~ 234 (1175)
.|++.- =++.+.+.+.+|+|+|...
T Consensus 225 ~IeG~V---DFIFG~g~a~Fe~C~I~s~ 249 (369)
T PLN02682 225 YIEGSV---DFIFGNGLSLYEGCHLHAI 249 (369)
T ss_pred EEcccc---cEEecCceEEEEccEEEEe
Confidence 888754 3677778888888888753
No 12
>PF13229 Beta_helix: Right handed beta helix region; PDB: 2INV_C 2INU_C 1RU4_A.
Probab=99.44 E-value=5.6e-13 Score=136.24 Aligned_cols=153 Identities=31% Similarity=0.377 Sum_probs=85.9
Q ss_pred eEEEeecccceEEecEEEcCcceEEEEeeCCeEEEeeceeeeCCcccEEEecCCccEEeeeEEEecccccEEEecCceeE
Q psy675 955 GIWVKNYANPIMRRNHIHHGRDVGIFTFDNGHGFFEANDIHNNRIAGFEVKAGANPTVVHCEIHHGQTGGIYVHENGLGQ 1034 (1175)
Q Consensus 955 Gi~v~~~~~~~i~~n~i~~~~~~Gi~~~~~~~~~~~~n~I~~n~~~GI~v~~~a~~~i~~~~I~~n~~~Gi~~~~~g~g~ 1034 (1175)
||++......+|++|+|++....||++.......+++|.|++ ...||++...+..++++|.+.++. .|+++.......
T Consensus 2 Gi~i~~~~~~~i~~~~i~~~~~~gi~~~~~~~~~i~n~~i~~-~~~gi~~~~~~~~~i~~~~~~~~~-~~i~~~~~~~~~ 79 (158)
T PF13229_consen 2 GISINNGSNVTIRNCTISNNGGDGIHVSGSSNITIENCTISN-GGYGIYVSGGSNVTISNNTISDNG-SGIYVSGSSNIT 79 (158)
T ss_dssp CEEETTCEC-EEESEEEESSSSECEEE-SSCESEEES-EEES-STTSEEEECCES-EEES-EEES-S-EEEECCS-CS-E
T ss_pred EEEEECCcCeEEeeeEEEeCCCeEEEEEcCCCeEEECeEEEC-CCcEEEEecCCCeEEECeEEEEcc-ceEEEEecCCce
Confidence 455555555555555555555555555544445666666666 556666666666666666666665 566666666666
Q ss_pred EEeeEEeecccceEEEec-CCceeEeCceEEeceeeeEEEEcee--eEEEeceeEecCceeceEEecCCC-cEEEeeeE
Q psy675 1035 FIDNRIHSNNFAGVWITS-NSNPTIRRNEIYNGHQGGVYIFGEG--RGLIEHNNIYGNALAGIQIRTSSD-PIVRHNKI 1109 (1175)
Q Consensus 1035 i~~n~I~~N~~~Gi~i~~-~~~~~i~~n~i~~~~~~GI~~~~~g--~g~i~~n~i~~n~~~gi~i~~~~~-~~v~~n~i 1109 (1175)
|++|+|+++...||++.. .++++|.+|+|++++..||++.... ...|++|+|++|...||++..++. ..|.+|+|
T Consensus 80 i~~~~i~~~~~~gi~~~~~~~~~~i~~n~~~~~~~~gi~~~~~~~~~~~i~~n~i~~~~~~gi~~~~~~~~~~v~~n~~ 158 (158)
T PF13229_consen 80 IENNRIENNGDYGIYISNSSSNVTIENNTIHNNGGSGIYLEGGSSPNVTIENNTISNNGGNGIYLISGSSNCTVTNNTF 158 (158)
T ss_dssp EES-EEECSSS-SCE-TCEECS-EEES-EEECCTTSSCEEEECC--S-EEECEEEECESSEEEE-TT-SS--EEES-E-
T ss_pred ecCcEEEcCCCccEEEeccCCCEEEEeEEEEeCcceeEEEECCCCCeEEEEEEEEEeCcceeEEEECCCCeEEEECCCC
Confidence 666666666666666665 6667777777777777777776666 666677777777777777776555 66666654
No 13
>PLN02773 pectinesterase
Probab=99.41 E-value=2.1e-11 Score=134.99 Aligned_cols=149 Identities=17% Similarity=0.243 Sum_probs=108.4
Q ss_pred CCCCCcchHHHHHhcCcccCCCccEEEEeCceeeeeEEEEC--cc-eEEEecCCCCcceeEEEecC--------------
Q psy675 66 RKLAHFDTIQAALDHGDELGQSAPLVFVHSGVYRGEFLVLD--SD-VIIIGAAPGNVAESVILERD-------------- 128 (1175)
Q Consensus 66 ~~~~~~~tIq~Al~~a~~gd~~~~~I~v~~G~Y~e~~l~I~--k~-v~l~G~g~g~~~~~v~i~~~-------------- 128 (1175)
...++|+|||+||++++.....+.+|+|+||+|+| .|+|+ |+ |+|+|+++.. ++|...
T Consensus 12 dGsGdf~TIq~Aida~P~~~~~~~~I~Ik~G~Y~E-~V~I~~~k~~itl~G~~~~~----TiI~~~~~a~~~~~~~~~~~ 86 (317)
T PLN02773 12 DGSGDYCTVQDAIDAVPLCNRCRTVIRVAPGVYRQ-PVYVPKTKNLITLAGLSPEA----TVLTWNNTATKIDHHQASRV 86 (317)
T ss_pred CCCCCccCHHHHHhhchhcCCceEEEEEeCceEEE-EEEECcCCccEEEEeCCCCc----eEEEccCccccccccccccc
Confidence 45678999999999998876566799999999998 99995 44 9999998654 244311
Q ss_pred -----CC-ceEEEecCceeeEEeeEEEEeCCCCCccccccceeEEEECCCcceEEeeeEEEeCCCCCeEEEEEccCccce
Q psy675 129 -----TE-STVMFVEGAKNAYLGHVTLKFSPEAPSTVQHHKHYCLEVGEHATPTIDHCIIRSTSVVGAAVCVSGVCASPT 202 (1175)
Q Consensus 129 -----~~-~~v~~~~g~~~~~l~~lti~~~~~~~~~~~~~~~~~i~v~~~~~~~i~~c~i~~~~~~g~~v~v~g~~a~~~ 202 (1175)
.+ .++.+. ++++.+++|||++...... +...+|.+. +.+..+.+|.|.+.. .++++.. .+..
T Consensus 87 ~g~gT~~SaTv~v~--a~~f~a~nlT~~Nt~~~~~----gQAvAl~v~-gDr~~f~~c~~~G~Q---DTL~~~~--gr~y 154 (317)
T PLN02773 87 IGTGTFGCGTVIVE--GEDFIAENITFENSAPEGS----GQAVAIRVT-ADRCAFYNCRFLGWQ---DTLYLHY--GKQY 154 (317)
T ss_pred cCcCccCceEEEEE--CCCeEEEeeEEEeCCCCCC----CcEEEEEec-CccEEEEccEeeccc---ceeEeCC--CCEE
Confidence 01 344444 6899999999998753211 112346665 467889999998853 4677652 5788
Q ss_pred EeeeeEecCcceeEEEeeceeEEEEeeEEEec
Q psy675 203 LRHCDISDCENVGLYVTDYAQGLYEDNEISRN 234 (1175)
Q Consensus 203 i~~c~i~~~~~~GI~v~~~s~~~ie~c~i~~~ 234 (1175)
+++|.|++.- =++.+.+.+.+|+|+|...
T Consensus 155 f~~c~IeG~V---DFIFG~g~a~Fe~c~i~s~ 183 (317)
T PLN02773 155 LRDCYIEGSV---DFIFGNSTALLEHCHIHCK 183 (317)
T ss_pred EEeeEEeecc---cEEeeccEEEEEeeEEEEc
Confidence 8999998754 3566788888999998754
No 14
>PF13229 Beta_helix: Right handed beta helix region; PDB: 2INV_C 2INU_C 1RU4_A.
Probab=99.40 E-value=2.1e-12 Score=131.99 Aligned_cols=153 Identities=25% Similarity=0.356 Sum_probs=84.7
Q ss_pred cEEEecCCCceEEceEEEcCccccEEEEecceeEEeeeEEeecceeeEEEecCCCceEeeeEEEeCceeeEEEEeCCeeE
Q psy675 315 GIQIRTSSDPIVRHNKIHHGQHGGVYVHEKGVGLIEENEVYANTLAGVWITTGSAPVLRRNRIHSGKQVGVYFYDNGHGK 394 (1175)
Q Consensus 315 GI~i~~~s~~~i~~n~i~~~~~~GI~v~~~s~~~i~~n~i~~n~~~GI~v~~~s~~~i~~n~i~~~~~~GI~v~~~~~~~ 394 (1175)
||.+...+.+.|++++|.++...||++...+..+|++|+|.+ ...||++...+...+++|++.++. .|+.+...+...
T Consensus 2 Gi~i~~~~~~~i~~~~i~~~~~~gi~~~~~~~~~i~n~~i~~-~~~gi~~~~~~~~~i~~~~~~~~~-~~i~~~~~~~~~ 79 (158)
T PF13229_consen 2 GISINNGSNVTIRNCTISNNGGDGIHVSGSSNITIENCTISN-GGYGIYVSGGSNVTISNNTISDNG-SGIYVSGSSNIT 79 (158)
T ss_dssp CEEETTCEC-EEESEEEESSSSECEEE-SSCESEEES-EEES-STTSEEEECCES-EEES-EEES-S-EEEECCS-CS-E
T ss_pred EEEEECCcCeEEeeeEEEeCCCeEEEEEcCCCeEEECeEEEC-CCcEEEEecCCCeEEECeEEEEcc-ceEEEEecCCce
Confidence 444444444555555555544455555555545555555555 445555555555555566665554 555555555566
Q ss_pred EeeceeeccceecEEEec-CCccEEeccEEeCCCCCcEEEEeCc--eeeEEeeEEecccccCEEEeecCC-ceEeeeeE
Q psy675 395 LEDNDIFNHLYSGVQIRT-GSNPIIRGNKIWGGQNGGVLVYNGG--LGLLEQNEIFDNAMAGVWIKTESN-PTLKRNKI 469 (1175)
Q Consensus 395 i~~n~I~~n~~~GI~i~~-~s~~~i~~n~i~~~~~~GI~l~~~~--~~~i~~n~I~~n~~~GI~i~~~s~-~~i~~n~i 469 (1175)
+++|+|.++...||.+.. .+.++|++|++.+++..|+++.... ..++++|+|.++...||++...+. +++++|+|
T Consensus 80 i~~~~i~~~~~~gi~~~~~~~~~~i~~n~~~~~~~~gi~~~~~~~~~~~i~~n~i~~~~~~gi~~~~~~~~~~v~~n~~ 158 (158)
T PF13229_consen 80 IENNRIENNGDYGIYISNSSSNVTIENNTIHNNGGSGIYLEGGSSPNVTIENNTISNNGGNGIYLISGSSNCTVTNNTF 158 (158)
T ss_dssp EES-EEECSSS-SCE-TCEECS-EEES-EEECCTTSSCEEEECC--S-EEECEEEECESSEEEE-TT-SS--EEES-E-
T ss_pred ecCcEEEcCCCccEEEeccCCCEEEEeEEEEeCcceeEEEECCCCCeEEEEEEEEEeCcceeEEEECCCCeEEEECCCC
Confidence 666666666656666665 6677788888888877888888777 677788888888778887776665 77777764
No 15
>TIGR03805 beta_helix_1 parallel beta-helix repeat-containing protein. Members of this protein family contain a tandem pair of beta-helix repeats (see TIGR03804). Each repeat is expected to consist of three beta strands that form a single turn as they form a right-handed helix of stacked beta-structure. Member proteinsa occur regularly in two-gene pairs along with another uncharacterized protein family; both protein families exhibit either lipoprotein or regular signal peptides, suggesting transit through the plasma membrane, and the two may be fused. The function of the pair is unknown.
Probab=99.40 E-value=2.2e-11 Score=137.45 Aligned_cols=173 Identities=20% Similarity=0.198 Sum_probs=113.3
Q ss_pred ccCcceeeeeEeecccccEEEEecCceEEecceec-------cCccceEEEecCCCcEEecceEEecccccEEEeCCceE
Q psy675 560 GANPTVVHCEIHHGQTGGIYVHENGLGQFIDNRIH-------SNNFAGVWITSNSNPTIRRNEIYNGHQGGVYIFGEGRG 632 (1175)
Q Consensus 560 ~~~~~i~~n~i~~n~~~GI~i~~~~~~~i~~n~i~-------~n~~~GI~i~~~~~~~i~~N~I~~n~~~GI~i~~~~~~ 632 (1175)
+.++++++.++.+....||++..+...+|+++++. .+...||++..+.++.|++|.+..+...||++..+.+.
T Consensus 62 a~~VtI~~ltI~~~~~~GI~v~~s~~i~I~n~~i~~~~~~~~~~~~~GI~~~~s~~v~I~~n~i~g~~d~GIyv~~s~~~ 141 (314)
T TIGR03805 62 SDDVTLSDLAVENTKGDGVKVKGSDGIIIRRLRVEWTGGPKSSNGAYGIYPVESTNVLVEDSYVRGASDAGIYVGQSQNI 141 (314)
T ss_pred eCCeEEEeeEEEcCCCCeEEEeCCCCEEEEeeEEEeccCccccCCcceEEEeccCCEEEECCEEECCCcccEEECCCCCe
Confidence 44555555555555555565555445555555554 24456777777777777777777776677877777777
Q ss_pred EEEeeEEEcceecCEEEeccCCCeEeeeEEeecccccEEE--------EecCccEEecceeeccccceEEeeeceeeeec
Q psy675 633 LIEHNNIYGNALAGIQIRTSSDPIVRHNKIHHGQHGGVYV--------HEKGVGLIEENEGKENQLLIFIRFLQIKLIPR 704 (1175)
Q Consensus 633 ~i~~N~i~~n~~~GI~i~~ss~~~i~~N~I~~n~~~GI~v--------~~~~~~~I~~N~i~~N~~~g~~~~~s~~~~~~ 704 (1175)
+|++|++.++. .||+++.+.+..+.+|.+..|. .||++ +.+.+..|.+|.+.+|...
T Consensus 142 ~v~nN~~~~n~-~GI~i~~S~~~~v~~N~~~~N~-~Gi~v~~~p~~~~~~s~~~~v~~N~i~~n~~~------------- 206 (314)
T TIGR03805 142 VVRNNVAEENV-AGIEIENSQNADVYNNIATNNT-GGILVFDLPGLPQPGGSNVRVFDNIIFDNNTP------------- 206 (314)
T ss_pred EEECCEEccCc-ceEEEEecCCcEEECCEEeccc-eeEEEeecCCCCcCCccceEEECCEEECCCCC-------------
Confidence 77888887776 4888887777788888877775 57777 3344566777777766431
Q ss_pred CCcCccCEEEEecCCCEEEceEEEc-CCcccEEEEeCCccEEeceEEEecccccEEEE
Q psy675 705 ARKTYSGVQIRTGSNPIIRGNKIWG-GQNGGVLVYNGGLGLLEQNEIFDNAMAGVWIK 761 (1175)
Q Consensus 705 ~~~~~~GI~i~~~~~~~i~~N~I~~-n~~~GI~l~~~~~~~i~~N~i~~N~~~GI~v~ 761 (1175)
+..+.+|.+.. ....||+++.+....|++|+|.+|..+||++.
T Consensus 207 --------------n~~~~gn~v~~~~~g~Gi~i~~~~~v~I~~N~i~~n~~~~i~~~ 250 (314)
T TIGR03805 207 --------------NFAPAGSIVASVPAGTGVVVMANRDVEIFGNVISNNDTANVLIS 250 (314)
T ss_pred --------------CCcccCCceecCCCCcEEEEEcccceEEECCEEeCCcceeEEEE
Confidence 11222333321 13457777777777888888888888888764
No 16
>PLN02671 pectinesterase
Probab=99.37 E-value=3.4e-11 Score=134.66 Aligned_cols=156 Identities=15% Similarity=0.190 Sum_probs=107.9
Q ss_pred CCCCCCcchHHHHHhcCcccCCCccEEEEeCceeeeeEEEEC--cc-eEEEecCCCCcceeEEEecC-------------
Q psy675 65 GRKLAHFDTIQAALDHGDELGQSAPLVFVHSGVYRGEFLVLD--SD-VIIIGAAPGNVAESVILERD------------- 128 (1175)
Q Consensus 65 ~~~~~~~~tIq~Al~~a~~gd~~~~~I~v~~G~Y~e~~l~I~--k~-v~l~G~g~g~~~~~v~i~~~------------- 128 (1175)
+...++|+|||+||+++++....+.+|+|+||+|+| .|+|+ || |+|+|+++. +..++|...
T Consensus 65 ~dGsGdf~TIQ~AIdavP~~~~~~~~I~Ik~GvY~E-kV~I~~~k~~Itl~G~g~~--~~~TvIt~~~~a~~~~~~g~~~ 141 (359)
T PLN02671 65 KNGGGDSLTVQGAVDMVPDYNSQRVKIYILPGIYRE-KVLVPKSKPYISFIGNESR--AGDTVISWNDKASDLDSNGFEL 141 (359)
T ss_pred CCCCCCccCHHHHHHhchhcCCccEEEEEeCceEEE-EEEECCCCCeEEEEecCCC--CCCEEEEcCCcccccccCCccc
Confidence 345789999999999999876567899999999998 99994 55 999998732 112345421
Q ss_pred ---CCceEEEecCceeeEEeeEEEEeCCCCCccccccceeEEEECCCcceEEeeeEEEeCCCCCeEEEEEccCccceEee
Q psy675 129 ---TESTVMFVEGAKNAYLGHVTLKFSPEAPSTVQHHKHYCLEVGEHATPTIDHCIIRSTSVVGAAVCVSGVCASPTLRH 205 (1175)
Q Consensus 129 ---~~~~v~~~~g~~~~~l~~lti~~~~~~~~~~~~~~~~~i~v~~~~~~~i~~c~i~~~~~~g~~v~v~g~~a~~~i~~ 205 (1175)
...++.+. ++++..++|||++.....+....++..++.+. +.++.+.+|.|.+.. .+++.. ..+-.+++
T Consensus 142 gT~~SaTv~v~--a~~F~a~nitfeNt~~~~~g~~~~QAVALrv~-gDra~f~~c~f~G~Q---DTLy~~--~gR~yf~~ 213 (359)
T PLN02671 142 GTYRTASVTIE--SDYFCATGITFENTVVAEPGGQGMQAVALRIS-GDKAFFYKVRVLGAQ---DTLLDE--TGSHYFYQ 213 (359)
T ss_pred cceeeEEEEEE--CCceEEEeeEEEcCCCCCCCCCCccEEEEEEc-CccEEEEcceEeccc---cccEeC--CCcEEEEe
Confidence 11234444 68899999999988432111111112346665 467888888888753 456653 35778888
Q ss_pred eeEecCcceeEEEeeceeEEEEeeEEEec
Q psy675 206 CDISDCENVGLYVTDYAQGLYEDNEISRN 234 (1175)
Q Consensus 206 c~i~~~~~~GI~v~~~s~~~ie~c~i~~~ 234 (1175)
|.|++.- =++.+.+.+.+|+|+|...
T Consensus 214 CyIeG~V---DFIFG~g~A~Fe~C~I~s~ 239 (359)
T PLN02671 214 CYIQGSV---DFIFGNAKSLYQDCVIQST 239 (359)
T ss_pred cEEEEec---cEEecceeEEEeccEEEEe
Confidence 8888654 3566778888888888754
No 17
>PLN02304 probable pectinesterase
Probab=99.36 E-value=4.7e-11 Score=133.93 Aligned_cols=153 Identities=14% Similarity=0.236 Sum_probs=109.3
Q ss_pred CCCCCcchHHHHHhcCcccCCCccEEEEeCceeeeeEEEEC--cc-eEEEecCCCCcceeEEEecCC----------Cce
Q psy675 66 RKLAHFDTIQAALDHGDELGQSAPLVFVHSGVYRGEFLVLD--SD-VIIIGAAPGNVAESVILERDT----------EST 132 (1175)
Q Consensus 66 ~~~~~~~tIq~Al~~a~~gd~~~~~I~v~~G~Y~e~~l~I~--k~-v~l~G~g~g~~~~~v~i~~~~----------~~~ 132 (1175)
...++|+|||+||++++++...+.+|+|+||+|+| .|+|. || |+|+|+++..+ +|.... ..+
T Consensus 82 dGsGdf~TIQ~AIdavP~~~~~r~vI~Ik~GvY~E-kV~Ip~~K~~Itl~G~g~~~T----iIt~~~~a~~~~gT~~SaT 156 (379)
T PLN02304 82 NGCCNFTTVQSAVDAVGNFSQKRNVIWINSGIYYE-KVTVPKTKPNITFQGQGFDST----AIAWNDTAKSANGTFYSAS 156 (379)
T ss_pred CCCCCccCHHHHHhhCcccCCCcEEEEEeCeEeEE-EEEECCCCCcEEEEecCCCCc----EEEccCcccCCCCccceEE
Confidence 45689999999999999876677899999999998 89994 55 99999986542 444221 134
Q ss_pred EEEecCceeeEEeeEEEEeCCCCCcccc-ccceeEEEECCCcceEEeeeEEEeCCCCCeEEEEEccCccceEeeeeEecC
Q psy675 133 VMFVEGAKNAYLGHVTLKFSPEAPSTVQ-HHKHYCLEVGEHATPTIDHCIIRSTSVVGAAVCVSGVCASPTLRHCDISDC 211 (1175)
Q Consensus 133 v~~~~g~~~~~l~~lti~~~~~~~~~~~-~~~~~~i~v~~~~~~~i~~c~i~~~~~~g~~v~v~g~~a~~~i~~c~i~~~ 211 (1175)
+.+. ++++.+++|||++.....+..+ ..+..+|.+. +.+..+.+|.|.+.. .+++.. ..+-.+++|.|++.
T Consensus 157 v~v~--a~~F~a~nITf~Nta~~~~~g~~~~QAVAL~v~-gDra~fy~C~f~G~Q---DTLy~~--~gR~Yf~~CyIeG~ 228 (379)
T PLN02304 157 VQVF--ASNFIAKNISFMNVAPIPKPGDVGAQAVAIRIA-GDQAAFWGCGFFGAQ---DTLHDD--RGRHYFKDCYIQGS 228 (379)
T ss_pred EEEE--CCCeEEEeeEEEecCCCCCCCCCCccEEEEEec-CCcEEEEeceEeccc---ceeEeC--CCCEEEEeeEEccc
Confidence 4444 6889999999998753221111 1112345555 467888899988854 457654 35788888888865
Q ss_pred cceeEEEeeceeEEEEeeEEEec
Q psy675 212 ENVGLYVTDYAQGLYEDNEISRN 234 (1175)
Q Consensus 212 ~~~GI~v~~~s~~~ie~c~i~~~ 234 (1175)
- =++.+.+.+.+|+|+|...
T Consensus 229 V---DFIFG~g~A~Fe~C~I~s~ 248 (379)
T PLN02304 229 I---DFIFGDARSLYENCRLISM 248 (379)
T ss_pred c---cEEeccceEEEEccEEEEe
Confidence 4 4677888888888888753
No 18
>PF05048 NosD: Periplasmic copper-binding protein (NosD); InterPro: IPR007742 Bacterial nitrous oxide (N(2)O) reductase is the terminal oxidoreductase of a respiratory process that generates dinitrogen from N(2)O. To attain its functional state, the enzyme is subjected to a maturation process which involves the protein-driven synthesis of a unique copper-sulphur cluster and metallation of the binuclear Cu(A) site in the periplasm. NosD is a periplasmic protein which is thought to insert copper into the exported reductase apoenzyme [].
Probab=99.35 E-value=2.8e-11 Score=132.55 Aligned_cols=136 Identities=23% Similarity=0.385 Sum_probs=107.9
Q ss_pred cCEEEEecCCCEEEceEEEcCCcccEEEEeCCccEEeceEEEecccccEEEEccCccEEeceEEEcCCCccEEEEcCcee
Q psy675 710 SGVQIRTGSNPIIRGNKIWGGQNGGVLVYNGGLGLLEQNEIFDNAMAGVWIKTESNPTLKRNKIFDGRDGGICIFNGGKG 789 (1175)
Q Consensus 710 ~GI~i~~~~~~~i~~N~I~~n~~~GI~l~~~~~~~i~~N~i~~N~~~GI~v~~~~~~~i~~N~I~~n~~~GI~i~~~~~~ 789 (1175)
.||++..+...+|++|++..+ ..||.+..+...+|++|.+..+. .||++..+++.+|++|+|.++.. ||.+..+...
T Consensus 36 ~gi~~~~s~~~~I~~n~i~~~-~~GI~~~~s~~~~i~~n~i~~n~-~Gi~l~~s~~~~I~~N~i~~n~~-GI~l~~s~~~ 112 (236)
T PF05048_consen 36 DGIYVENSDNNTISNNTISNN-RYGIHLMGSSNNTIENNTISNNG-YGIYLMGSSNNTISNNTISNNGY-GIYLYGSSNN 112 (236)
T ss_pred CEEEEEEcCCeEEEeeEEECC-CeEEEEEccCCCEEEeEEEEccC-CCEEEEcCCCcEEECCEecCCCc-eEEEeeCCce
Confidence 456666666777777777766 67888888777888888888887 88888888877888888887766 8888877777
Q ss_pred EEEcceEeeeccCcEEEecCCCceEEeeeeecCccccEE-EecCccceeecceEEeccccce
Q psy675 790 VLEENDIFRNAQAGVLISTQSHPMLRRNRIFDGFAAGVE-ITNNATATLEDNQIFNNRFGGL 850 (1175)
Q Consensus 790 ~i~~N~i~~N~~~Gi~l~~~~~~~i~~N~I~~n~~~GI~-i~~~~~~~v~~N~i~~N~~g~~ 850 (1175)
.|++|+|. +...||++.......|++|+|..|..+||+ +......+|..|.| +|.....
T Consensus 113 ~I~~N~i~-~~~~GI~l~~s~~n~I~~N~i~~n~~~Gi~~~~~s~~n~I~~N~f-~N~~~~~ 172 (236)
T PF05048_consen 113 TISNNTIS-NNGYGIYLSSSSNNTITGNTISNNTDYGIYFLSGSSGNTIYNNNF-NNSINVI 172 (236)
T ss_pred EEECcEEe-CCCEEEEEEeCCCCEEECeEEeCCCccceEEeccCCCCEEECCCc-cCEeccE
Confidence 88888888 558888888888888999999998888998 66666777888888 7765544
No 19
>PLN02432 putative pectinesterase
Probab=99.35 E-value=6e-11 Score=129.93 Aligned_cols=147 Identities=20% Similarity=0.296 Sum_probs=108.1
Q ss_pred CCCCCcchHHHHHhcCcccCCCccEEEEeCceeeeeEEEE--Ccc-eEEEecCCCCcceeEEEecC------CCceEEEe
Q psy675 66 RKLAHFDTIQAALDHGDELGQSAPLVFVHSGVYRGEFLVL--DSD-VIIIGAAPGNVAESVILERD------TESTVMFV 136 (1175)
Q Consensus 66 ~~~~~~~tIq~Al~~a~~gd~~~~~I~v~~G~Y~e~~l~I--~k~-v~l~G~g~g~~~~~v~i~~~------~~~~v~~~ 136 (1175)
...++|+|||+||++++.....+.+|+|+||+|+| .|.| .|| |+|+|+++.. ++|... ..+++.+.
T Consensus 18 ~Gsg~f~TIq~Aida~p~~~~~~~~I~I~~G~Y~E-~V~ip~~k~~itl~G~~~~~----TvI~~~~~~~~~~saT~~v~ 92 (293)
T PLN02432 18 SGKGDFRKIQDAIDAVPSNNSQLVFIWVKPGIYRE-KVVVPADKPFITLSGTQASN----TIITWNDGGDIFESPTLSVL 92 (293)
T ss_pred CCCCCccCHHHHHhhccccCCceEEEEEeCceeEE-EEEEeccCceEEEEEcCCCC----eEEEecCCcccccceEEEEE
Confidence 35678999999999999876667899999999998 8999 455 9999998653 255332 23455555
Q ss_pred cCceeeEEeeEEEEeCCCCCccccccceeEEEECCCcceEEeeeEEEeCCCCCeEEEEEccCccceEeeeeEecCcceeE
Q psy675 137 EGAKNAYLGHVTLKFSPEAPSTVQHHKHYCLEVGEHATPTIDHCIIRSTSVVGAAVCVSGVCASPTLRHCDISDCENVGL 216 (1175)
Q Consensus 137 ~g~~~~~l~~lti~~~~~~~~~~~~~~~~~i~v~~~~~~~i~~c~i~~~~~~g~~v~v~g~~a~~~i~~c~i~~~~~~GI 216 (1175)
++++.+++|||++.-... .+..+|.+. +.+..+.+|.|.+.. .+++.. ..+..+++|.|++.- =
T Consensus 93 --a~~f~a~nlt~~Nt~g~~-----~QAvAl~v~-gDr~~f~~c~~~G~Q---DTLy~~--~gr~yf~~c~I~G~V---D 156 (293)
T PLN02432 93 --ASDFVGRFLTIQNTFGSS-----GKAVALRVA-GDRAAFYGCRILSYQ---DTLLDD--TGRHYYRNCYIEGAT---D 156 (293)
T ss_pred --CCCeEEEeeEEEeCCCCC-----CceEEEEEc-CCcEEEEcceEeccc---ceeEEC--CCCEEEEeCEEEecc---c
Confidence 789999999999875321 112345555 477888899988753 457654 357888888888754 3
Q ss_pred EEeeceeEEEEeeEEEe
Q psy675 217 YVTDYAQGLYEDNEISR 233 (1175)
Q Consensus 217 ~v~~~s~~~ie~c~i~~ 233 (1175)
++.+.+.+.+|+|+|..
T Consensus 157 FIFG~g~a~Fe~c~i~s 173 (293)
T PLN02432 157 FICGNAASLFEKCHLHS 173 (293)
T ss_pred EEecCceEEEEeeEEEE
Confidence 56677888888888875
No 20
>PLN02176 putative pectinesterase
Probab=99.35 E-value=5.9e-11 Score=132.24 Aligned_cols=153 Identities=17% Similarity=0.193 Sum_probs=106.8
Q ss_pred CCCCCCcchHHHHHhcCcccCCCccEEEEeCceeeeeEEEECc--c-eEEEecCCCCcceeEEEecC------CCceEEE
Q psy675 65 GRKLAHFDTIQAALDHGDELGQSAPLVFVHSGVYRGEFLVLDS--D-VIIIGAAPGNVAESVILERD------TESTVMF 135 (1175)
Q Consensus 65 ~~~~~~~~tIq~Al~~a~~gd~~~~~I~v~~G~Y~e~~l~I~k--~-v~l~G~g~g~~~~~v~i~~~------~~~~v~~ 135 (1175)
+...++|+|||+||+++++....+.+|+|+||+|+| .|+|++ | |+|+|++++. ++|... ..+++.+
T Consensus 45 ~dGsGdf~TIq~AIdavP~~~~~~~~I~Ik~GvY~E-kV~Ip~~k~~vtl~G~g~~~----TiIt~~~~~~t~~saT~~v 119 (340)
T PLN02176 45 PNDARYFKTVQSAIDSIPLQNQNWIRILIQNGIYRE-KVTIPKEKGYIYMQGKGIEK----TIIAYGDHQATDTSATFTS 119 (340)
T ss_pred CCCCCCccCHHHHHhhchhcCCceEEEEECCcEEEE-EEEECCCCccEEEEEcCCCc----eEEEEeCCcccccceEEEE
Confidence 445789999999999999876567789999999998 999954 3 9999998653 245321 2235555
Q ss_pred ecCceeeEEeeEEEEeCCCCCcc--ccccceeEEEECCCcceEEeeeEEEeCCCCCeEEEEEccCccceEeeeeEecCcc
Q psy675 136 VEGAKNAYLGHVTLKFSPEAPST--VQHHKHYCLEVGEHATPTIDHCIIRSTSVVGAAVCVSGVCASPTLRHCDISDCEN 213 (1175)
Q Consensus 136 ~~g~~~~~l~~lti~~~~~~~~~--~~~~~~~~i~v~~~~~~~i~~c~i~~~~~~g~~v~v~g~~a~~~i~~c~i~~~~~ 213 (1175)
. ++++.+++|||++....... ....+..++.+. +.+..+.+|.|.+.. .+++.. ..+-.+++|.|++.-
T Consensus 120 ~--a~~F~a~nlT~~Nt~~~~~~~~~~~~QAVAl~v~-gDr~~f~~C~f~G~Q---DTLy~~--~gRqyf~~CyIeG~V- 190 (340)
T PLN02176 120 Y--ASNIIITGITFKNTYNIASNSSRPTKPAVAARML-GDKYAIIDSSFDGFQ---DTLFDG--KGRHYYKRCVISGGI- 190 (340)
T ss_pred E--CCCEEEEeeEEEeCCCccCCCCCCccceEEEEec-CccEEEEccEEeccc---ceeEeC--CcCEEEEecEEEecc-
Confidence 5 78999999999987532111 001112345555 467788888888753 456653 357778888887654
Q ss_pred eeEEEeeceeEEEEeeEEEe
Q psy675 214 VGLYVTDYAQGLYEDNEISR 233 (1175)
Q Consensus 214 ~GI~v~~~s~~~ie~c~i~~ 233 (1175)
=++.+.+.+.+|+|+|..
T Consensus 191 --DFIFG~a~a~Fe~C~I~s 208 (340)
T PLN02176 191 --DFIFGYAQSIFEGCTLKL 208 (340)
T ss_pred --cEEecCceEEEeccEEEE
Confidence 356677788888888864
No 21
>PRK10531 acyl-CoA thioesterase; Provisional
Probab=99.34 E-value=1.1e-10 Score=132.38 Aligned_cols=158 Identities=14% Similarity=0.161 Sum_probs=106.1
Q ss_pred CCCCCCcchHHHHHhcCccc-CCCccEEEEeCceeeeeEEEEC--cc-eEEEecCCCCcceeEEEecC------------
Q psy675 65 GRKLAHFDTIQAALDHGDEL-GQSAPLVFVHSGVYRGEFLVLD--SD-VIIIGAAPGNVAESVILERD------------ 128 (1175)
Q Consensus 65 ~~~~~~~~tIq~Al~~a~~g-d~~~~~I~v~~G~Y~e~~l~I~--k~-v~l~G~g~g~~~~~v~i~~~------------ 128 (1175)
+...++|+|||+|||+|.|. ...+.+|+|+||+|+| .|.|. || |+|+|++.+ ++.++|...
T Consensus 88 ~dGsGdf~TIQaAIdAa~~~~~~~r~~I~Ik~GvY~E-kV~Ip~~kp~ItL~G~G~~--~~~TvIt~~~~~~~~~~~~~~ 164 (422)
T PRK10531 88 GTQGVTHTTVQAAVDAAIAKRTNKRQYIAVMPGTYQG-TVYVPAAAPPITLYGTGEK--PIDVKIGLALDGEMSPADWRA 164 (422)
T ss_pred CCCCCCccCHHHHHhhccccCCCceEEEEEeCceeEE-EEEeCCCCceEEEEecCCC--CCceEEEecCccccccccccc
Confidence 45667999999999987653 3356789999999998 89995 44 999997732 123455432
Q ss_pred --------------------------------CCceEEEecCceeeEEeeEEEEeCCCCCccccccceeEEEECCCcceE
Q psy675 129 --------------------------------TESTVMFVEGAKNAYLGHVTLKFSPEAPSTVQHHKHYCLEVGEHATPT 176 (1175)
Q Consensus 129 --------------------------------~~~~v~~~~g~~~~~l~~lti~~~~~~~~~~~~~~~~~i~v~~~~~~~ 176 (1175)
...++.+. ++++.+++|||++.-........++-.+|.+. +.+..
T Consensus 165 ~~~~~g~~~~~~p~~y~~d~~~~~~~~~~gT~~SATv~v~--ad~F~a~NLTf~Ntag~~~~~~~~QAVALrv~-GDra~ 241 (422)
T PRK10531 165 NVNPRGKYMPGKPAWYMYDSCQSKRAATIGTLCSAVFWSQ--NNGLQLQNLTIENTLGDSVDAGNHPAVALRTD-GDKVQ 241 (422)
T ss_pred cccccccccccccccccccccccccCCCcCceeeEEEEEE--CCCEEEEeeEEEeCCCCCCCCCcceeEEEEEc-CCcEE
Confidence 01123333 68899999999987543211111112345555 46888
Q ss_pred EeeeEEEeCCCCCeEEEEEc----------cCccceEeeeeEecCcceeEEEeeceeEEEEeeEEEec
Q psy675 177 IDHCIIRSTSVVGAAVCVSG----------VCASPTLRHCDISDCENVGLYVTDYAQGLYEDNEISRN 234 (1175)
Q Consensus 177 i~~c~i~~~~~~g~~v~v~g----------~~a~~~i~~c~i~~~~~~GI~v~~~s~~~ie~c~i~~~ 234 (1175)
+.+|.|.+.. ..+++.. ...+-.+++|.|++.- =++.+.+.+.+|+|+|...
T Consensus 242 fy~C~flG~Q---DTLy~~~~~~~~~~~~~~~gRqYf~~CyIeG~V---DFIFG~g~AvFenC~I~s~ 303 (422)
T PRK10531 242 IENVNILGRQ---DTFFVTNSGVQNRLETDRQPRTYVKNSYIEGDV---DFVFGRGAVVFDNTEFRVV 303 (422)
T ss_pred EEeeEEeccc---ceeeeccccccccccccccccEEEEeCEEeecc---cEEccCceEEEEcCEEEEe
Confidence 9999998854 4577521 1236788888888654 3567778888888888763
No 22
>PLN02497 probable pectinesterase
Probab=99.34 E-value=7.5e-11 Score=130.94 Aligned_cols=153 Identities=20% Similarity=0.255 Sum_probs=107.8
Q ss_pred CCCCCcchHHHHHhcCcccCCCccEEEEeCceeeeeEEEEC--cc-eEEEecCCCCcceeEEEecC------CCceEEEe
Q psy675 66 RKLAHFDTIQAALDHGDELGQSAPLVFVHSGVYRGEFLVLD--SD-VIIIGAAPGNVAESVILERD------TESTVMFV 136 (1175)
Q Consensus 66 ~~~~~~~tIq~Al~~a~~gd~~~~~I~v~~G~Y~e~~l~I~--k~-v~l~G~g~g~~~~~v~i~~~------~~~~v~~~ 136 (1175)
...++|+|||+||++++.....+.+|+|+||+|+| .|+|+ || |+|+|+++..+ +|... ..+++.+.
T Consensus 39 dGsGdf~TIq~AIdavP~~~~~~~~I~Ik~G~Y~E-kV~Ip~~k~~itl~G~g~~~t----iIt~~~~~~t~~SaT~~v~ 113 (331)
T PLN02497 39 SGHGNFTTIQSAIDSVPSNNKHWFCINVKAGLYRE-KVKIPYDKPFIVLVGAGKRRT----RIEWDDHDSTAQSPTFSTL 113 (331)
T ss_pred CCCCCccCHHHHHhhccccCCceEEEEEeCcEEEE-EEEecCCCCcEEEEecCCCCc----eEEEeccccccCceEEEEe
Confidence 45678999999999999876566789999999998 99994 44 99999986542 44421 23455555
Q ss_pred cCceeeEEeeEEEEeCCCCCcc---ccccceeEEEECCCcceEEeeeEEEeCCCCCeEEEEEccCccceEeeeeEecCcc
Q psy675 137 EGAKNAYLGHVTLKFSPEAPST---VQHHKHYCLEVGEHATPTIDHCIIRSTSVVGAAVCVSGVCASPTLRHCDISDCEN 213 (1175)
Q Consensus 137 ~g~~~~~l~~lti~~~~~~~~~---~~~~~~~~i~v~~~~~~~i~~c~i~~~~~~g~~v~v~g~~a~~~i~~c~i~~~~~ 213 (1175)
++++.+++|||++....+.. ...+...++.+. +.+..+.+|.|.+.. .+++.. ..+-.+++|.|++.-
T Consensus 114 --a~~f~a~nlT~~Nt~~~~~~~~~~~~~QAVAl~v~-gDr~~fy~C~f~G~Q---DTLy~~--~gRqyf~~C~IeG~V- 184 (331)
T PLN02497 114 --ADNTVVKSITFANSYNFPSKGNKNPRVPAVAAMIG-GDKSAFYSCGFAGVQ---DTLWDS--DGRHYFKRCTIQGAV- 184 (331)
T ss_pred --cCCeEEEccEEEeCCCCccccCCCCCcceEEEEec-CCcEEEEeeEEeccc---cceeeC--CCcEEEEeCEEEecc-
Confidence 78999999999987542210 001112345555 467788888888854 456653 357788888888654
Q ss_pred eeEEEeeceeEEEEeeEEEec
Q psy675 214 VGLYVTDYAQGLYEDNEISRN 234 (1175)
Q Consensus 214 ~GI~v~~~s~~~ie~c~i~~~ 234 (1175)
=++.+.+.+.+|+|+|...
T Consensus 185 --DFIFG~g~a~Fe~C~I~s~ 203 (331)
T PLN02497 185 --DFIFGSGQSIYESCVIQVL 203 (331)
T ss_pred --cEEccCceEEEEccEEEEe
Confidence 3567778888888888753
No 23
>PLN02665 pectinesterase family protein
Probab=99.33 E-value=6.5e-11 Score=133.25 Aligned_cols=155 Identities=14% Similarity=0.226 Sum_probs=107.5
Q ss_pred CCCCCCcchHHHHHhcCcccCCCccEEEEeCceeeeeEEEEC--cc-eEEEecCCCCcceeEEEecC---------CCce
Q psy675 65 GRKLAHFDTIQAALDHGDELGQSAPLVFVHSGVYRGEFLVLD--SD-VIIIGAAPGNVAESVILERD---------TEST 132 (1175)
Q Consensus 65 ~~~~~~~~tIq~Al~~a~~gd~~~~~I~v~~G~Y~e~~l~I~--k~-v~l~G~g~g~~~~~v~i~~~---------~~~~ 132 (1175)
+...++|+|||+||++++++...+.+|+|+||+|+| .|+|+ || |+|+|+++..+ +|... ...+
T Consensus 74 ~dG~Gdf~TIq~AIdaiP~~~~~r~vI~Ik~GvY~E-kV~Ip~~kp~Itl~G~~~~~t----iIt~~~~a~~~gT~~SaT 148 (366)
T PLN02665 74 KDGSGDFKTITDAIKSIPAGNTQRVIIDIGPGEYNE-KITIDRSKPFVTLYGSPGAMP----TLTFDGTAAKYGTVYSAT 148 (366)
T ss_pred CCCCCCccCHHHHHhhCcccCCceEEEEEeCcEEEE-EEEecCCCCEEEEEecCCCCC----EEEECCccCCCCCcceEE
Confidence 346789999999999999986677899999999998 89995 55 99999886532 45432 1234
Q ss_pred EEEecCceeeEEeeEEEEeCCCCCccccc-cceeEEEECCCcceEEeeeEEEeCCCCCeEEEEEccCccceEeeeeEecC
Q psy675 133 VMFVEGAKNAYLGHVTLKFSPEAPSTVQH-HKHYCLEVGEHATPTIDHCIIRSTSVVGAAVCVSGVCASPTLRHCDISDC 211 (1175)
Q Consensus 133 v~~~~g~~~~~l~~lti~~~~~~~~~~~~-~~~~~i~v~~~~~~~i~~c~i~~~~~~g~~v~v~g~~a~~~i~~c~i~~~ 211 (1175)
+.+. ++++.+++|||+++...++.... .+..++.+. +.+..+.+|.|.+.. .+++.. ..+-.+++|.|++.
T Consensus 149 v~v~--a~~F~a~nitf~Nta~~~~~~~~g~QAVAl~v~-gDka~f~~C~f~G~Q---DTL~~~--~gr~yf~~CyIeG~ 220 (366)
T PLN02665 149 LIVE--SDYFMAANIIIKNSAPRPDGKRKGAQAVAMRIS-GDKAAFYNCRFIGFQ---DTLCDD--KGRHFFKDCYIEGT 220 (366)
T ss_pred EEEE--CCCeEEEeeEEEeCCCCcCCCCCCcceEEEEEc-CCcEEEEcceecccc---ceeEeC--CCCEEEEeeEEeec
Confidence 4444 78999999999998542211101 112345555 367888888888753 356653 35677888888765
Q ss_pred cceeEEEeeceeEEEEeeEEEecC
Q psy675 212 ENVGLYVTDYAQGLYEDNEISRNA 235 (1175)
Q Consensus 212 ~~~GI~v~~~s~~~ie~c~i~~~~ 235 (1175)
- =++.+.+.+.+|+|+|....
T Consensus 221 V---DFIFG~g~a~fe~C~i~s~~ 241 (366)
T PLN02665 221 V---DFIFGSGKSLYLNTELHVVG 241 (366)
T ss_pred c---ceeccccceeeEccEEEEec
Confidence 4 35667777788888887543
No 24
>PF05048 NosD: Periplasmic copper-binding protein (NosD); InterPro: IPR007742 Bacterial nitrous oxide (N(2)O) reductase is the terminal oxidoreductase of a respiratory process that generates dinitrogen from N(2)O. To attain its functional state, the enzyme is subjected to a maturation process which involves the protein-driven synthesis of a unique copper-sulphur cluster and metallation of the binuclear Cu(A) site in the periplasm. NosD is a periplasmic protein which is thought to insert copper into the exported reductase apoenzyme [].
Probab=99.31 E-value=5.3e-11 Score=130.40 Aligned_cols=151 Identities=27% Similarity=0.412 Sum_probs=87.8
Q ss_pred eeEEEeecccceEEecEEEcCcceEEEEeeCCeEEEeeceeeeCCcccEEEecCCccEEeeeEEEecccccEEEecCcee
Q psy675 954 AGIWVKNYANPIMRRNHIHHGRDVGIFTFDNGHGFFEANDIHNNRIAGFEVKAGANPTVVHCEIHHGQTGGIYVHENGLG 1033 (1175)
Q Consensus 954 ~Gi~v~~~~~~~i~~n~i~~~~~~Gi~~~~~~~~~~~~n~I~~n~~~GI~v~~~a~~~i~~~~I~~n~~~Gi~~~~~g~g 1033 (1175)
.||++.......++++.+...+ .||++.......+++|.|+++ ..||.+......++++|.+.++. .||++..+...
T Consensus 14 ~Gi~l~~~~~~~i~~n~i~~~~-~gi~~~~s~~~~I~~n~i~~~-~~GI~~~~s~~~~i~~n~i~~n~-~Gi~l~~s~~~ 90 (236)
T PF05048_consen 14 NGIYLWNSSNNSIENNTISNSR-DGIYVENSDNNTISNNTISNN-RYGIHLMGSSNNTIENNTISNNG-YGIYLMGSSNN 90 (236)
T ss_pred CcEEEEeCCCCEEEcCEEEeCC-CEEEEEEcCCeEEEeeEEECC-CeEEEEEccCCCEEEeEEEEccC-CCEEEEcCCCc
Confidence 5666666666666656554443 344554455566666666666 35666666556666666666665 56666555544
Q ss_pred EEEeeEEeecccceEEEecCCceeEeCceEEeceeeeEEEEceeeEEEeceeEecCceeceE-EecCCCcEEEeeeE
Q psy675 1034 QFIDNRIHSNNFAGVWITSNSNPTIRRNEIYNGHQGGVYIFGEGRGLIEHNNIYGNALAGIQ-IRTSSDPIVRHNKI 1109 (1175)
Q Consensus 1034 ~i~~n~I~~N~~~Gi~i~~~~~~~i~~n~i~~~~~~GI~~~~~g~g~i~~n~i~~n~~~gi~-i~~~~~~~v~~n~i 1109 (1175)
.|++|+|.+|.. ||++......+|.+|+|. +...||++.......|++|+|.+|...||. +..+....|.+|.|
T Consensus 91 ~I~~N~i~~n~~-GI~l~~s~~~~I~~N~i~-~~~~GI~l~~s~~n~I~~N~i~~n~~~Gi~~~~~s~~n~I~~N~f 165 (236)
T PF05048_consen 91 TISNNTISNNGY-GIYLYGSSNNTISNNTIS-NNGYGIYLSSSSNNTITGNTISNNTDYGIYFLSGSSGNTIYNNNF 165 (236)
T ss_pred EEECCEecCCCc-eEEEeeCCceEEECcEEe-CCCEEEEEEeCCCCEEECeEEeCCCccceEEeccCCCCEEECCCc
Confidence 666666666655 666665555556666665 555566665555555555666555555555 44455555555555
No 25
>PF01095 Pectinesterase: Pectinesterase; InterPro: IPR000070 Pectinesterase 3.1.1.11 from EC (pectin methylesterase) catalyses the de-esterification of pectin into pectate and methanol. Pectin is one of the main components of the plant cell wall. In plants, pectinesterase plays an important role in cell wall metabolism during fruit ripening. In plant bacterial pathogens such as Erwinia carotovora and in fungal pathogens such as Aspergillus niger, pectinesterase is involved in maceration and soft-rotting of plant tissue. Plant pectinesterases are regulated by pectinesterase inhibitors, which are ineffective against microbial enzymes []. Prokaryotic and eukaryotic pectinesterases share a few regions of sequence similarity. The crystal structure of pectinesterase from Erwinia chrysanthemi revealed a beta-helix structure similar to that found in pectinolytic enzymes, though it is different from most structures of esterases []. The putative catalytic residues are in a similar location to those of the active site and substrate-binding cleft of pectate lyase.; GO: 0030599 pectinesterase activity, 0042545 cell wall modification, 0005618 cell wall; PDB: 1QJV_B 1XG2_A 1GQ8_A 2NTQ_A 2NTP_A 2NT9_A 2NT6_B 2NSP_B 2NTB_A 2NST_A ....
Probab=99.29 E-value=9.9e-11 Score=130.35 Aligned_cols=149 Identities=18% Similarity=0.317 Sum_probs=98.5
Q ss_pred CCCCCcchHHHHHhcCcccCCCccEEEEeCceeeeeEEEECc---ceEEEecCCCCcceeEEEecC----------CCce
Q psy675 66 RKLAHFDTIQAALDHGDELGQSAPLVFVHSGVYRGEFLVLDS---DVIIIGAAPGNVAESVILERD----------TEST 132 (1175)
Q Consensus 66 ~~~~~~~tIq~Al~~a~~gd~~~~~I~v~~G~Y~e~~l~I~k---~v~l~G~g~g~~~~~v~i~~~----------~~~~ 132 (1175)
...++|+|||+||+++++....+.+|+|+||+|+| .|.|++ +|+|+|+++.. ++|... ...+
T Consensus 7 dG~gdf~TIq~Aida~p~~~~~~~~I~I~~G~Y~E-~V~i~~~k~~v~l~G~~~~~----tiI~~~~~~~~~~~t~~saT 81 (298)
T PF01095_consen 7 DGSGDFTTIQAAIDAAPDNNTSRYTIFIKPGTYRE-KVTIPRSKPNVTLIGEGRDK----TIITGNDNAADGGGTFRSAT 81 (298)
T ss_dssp TSTSSBSSHHHHHHHS-SSSSS-EEEEE-SEEEE---EEE-STSTTEEEEES-TTT----EEEEE---TTTB-HCGGC-S
T ss_pred CCCCCccCHHHHHHhchhcCCceEEEEEeCeeEcc-ccEeccccceEEEEecCCCc----eEEEEecccccccccccccc
Confidence 45689999999999999876567899999999998 999986 49999998653 244432 1245
Q ss_pred EEEecCceeeEEeeEEEEeCCCCCccccccceeEEEECCCcceEEeeeEEEeCCCCCeEEEEEccCccceEeeeeEecCc
Q psy675 133 VMFVEGAKNAYLGHVTLKFSPEAPSTVQHHKHYCLEVGEHATPTIDHCIIRSTSVVGAAVCVSGVCASPTLRHCDISDCE 212 (1175)
Q Consensus 133 v~~~~g~~~~~l~~lti~~~~~~~~~~~~~~~~~i~v~~~~~~~i~~c~i~~~~~~g~~v~v~g~~a~~~i~~c~i~~~~ 212 (1175)
+.+. +.++.+.+|||++....... ...+|.+. ..+..+.+|.|.+.. .++++.+ .+..+++|.|++.-
T Consensus 82 ~~v~--a~~f~~~nit~~Nt~g~~~~----qAvAl~~~-~d~~~f~~c~~~g~Q---DTL~~~~--~r~y~~~c~IeG~v 149 (298)
T PF01095_consen 82 FSVN--ADDFTAENITFENTAGPSGG----QAVALRVS-GDRAAFYNCRFLGYQ---DTLYANG--GRQYFKNCYIEGNV 149 (298)
T ss_dssp EEE---STT-EEEEEEEEEHCSGSG--------SEEET--TSEEEEEEEEE-ST---T-EEE-S--SEEEEES-EEEESE
T ss_pred cccc--ccceeeeeeEEecCCCCccc----ceeeeeec-CCcEEEEEeEEcccc---ceeeecc--ceeEEEeeEEEecC
Confidence 5555 78999999999986432110 11245555 467899999999864 4688754 47889999998754
Q ss_pred ceeEEEeeceeEEEEeeEEEec
Q psy675 213 NVGLYVTDYAQGLYEDNEISRN 234 (1175)
Q Consensus 213 ~~GI~v~~~s~~~ie~c~i~~~ 234 (1175)
=++.+.+.+.+++|+|...
T Consensus 150 ---DFIfG~~~a~f~~c~i~~~ 168 (298)
T PF01095_consen 150 ---DFIFGNGTAVFENCTIHSR 168 (298)
T ss_dssp ---EEEEESSEEEEES-EEEE-
T ss_pred ---cEEECCeeEEeeeeEEEEe
Confidence 4677888999999999864
No 26
>PF14592 Chondroitinas_B: Chondroitinase B; PDB: 1OFM_A 1OFL_A 1DBO_A 1DBG_A.
Probab=99.28 E-value=8.1e-10 Score=125.15 Aligned_cols=258 Identities=14% Similarity=0.162 Sum_probs=121.6
Q ss_pred cchHHHHHhcCcccCCCccEEEEeCceeeeeEEEE------CcceEEEecCCCCcceeEEEecCCCceEEEecCceeeEE
Q psy675 71 FDTIQAALDHGDELGQSAPLVFVHSGVYRGEFLVL------DSDVIIIGAAPGNVAESVILERDTESTVMFVEGAKNAYL 144 (1175)
Q Consensus 71 ~~tIq~Al~~a~~gd~~~~~I~v~~G~Y~e~~l~I------~k~v~l~G~g~g~~~~~v~i~~~~~~~v~~~~g~~~~~l 144 (1175)
.++||+||++|.||| +|.|++|+|..-.|.+ .+||||.++.||. |+|++. +.|.+. ++.+.|
T Consensus 4 ~~~lq~Ai~~a~pGD----~I~L~~Gty~~~~i~~~~~GT~~~PItl~Ae~~G~----vvi~G~--s~l~i~--G~yl~v 71 (425)
T PF14592_consen 4 VAELQSAIDNAKPGD----TIVLADGTYKDVEIVFKGSGTAAKPITLRAENPGK----VVITGE--SNLRIS--GSYLVV 71 (425)
T ss_dssp HHHHHHHHHH--TT-----EEEE-SEEEET-EEEE-S--BTTB-EEEEESSTTS----EEEEES---EEEE---SSSEEE
T ss_pred HHHHHHHHHhCCCCC----EEEECCceeecceEEEEecccCCCCEEEEecCCCe----EEEecc--eeEEEE--eeeEEE
Confidence 468999999999999 9999999999634666 3679999988875 588864 467776 689999
Q ss_pred eeEEEEeCCCCC-ccccccceeEEEECCCcceEEeeeEEEeCCC---CCeEEEEE---ccCccceEeeeeEecCcceeEE
Q psy675 145 GHVTLKFSPEAP-STVQHHKHYCLEVGEHATPTIDHCIIRSTSV---VGAAVCVS---GVCASPTLRHCDISDCENVGLY 217 (1175)
Q Consensus 145 ~~lti~~~~~~~-~~~~~~~~~~i~v~~~~~~~i~~c~i~~~~~---~g~~v~v~---g~~a~~~i~~c~i~~~~~~GI~ 217 (1175)
+||.|+...... ....... ...-..+...++.+|.|..... .....+|. --+..-+|.+|.|.+-...|.+
T Consensus 72 ~GL~F~ng~~~~~~vi~fr~--~~~~~~a~~~RlT~~vi~~fn~~~~~~~~~wv~~~~l~G~~NrvDhn~F~gK~~~G~~ 149 (425)
T PF14592_consen 72 SGLKFKNGYTPTGAVISFRN--GGDASYANHCRLTNCVIDDFNNPDREESDNWVTIYSLYGKHNRVDHNYFQGKTNRGPT 149 (425)
T ss_dssp ES-EEEEE---TTT--TTS----SEEE-SSS-EEES-EEES--SS-S-SEEE---TT-----S-EEES-EEE---SSS-S
T ss_pred eCeEEecCCCCCCceEEeec--CCCcceecceEEEeEEeeccCCcccccCceEEEEEEeeccCceEEccEeeccccCCcE
Confidence 999998543211 1111110 0000013678888998886421 11222331 1235678888888876544432
Q ss_pred EeeceeEEEEeeEEEecCceeEEEeccCcceEEecEEEecccceEEEecCCCcccccCCcceEecceeeecccccEEE--
Q psy675 218 VTDYAQGLYEDNEISRNALAGIWVKNYANPIMRRNHIHHGRDVGIFTFDNGHIFPISNSNPTIRRNEIYNGHQGGVYI-- 295 (1175)
Q Consensus 218 v~~~s~~~ie~c~i~~~~~~gI~v~~~a~~~i~~~~I~~~~~~GI~~~~~g~g~~~~~s~~~i~~n~I~~~~~~GI~v-- 295 (1175)
+.-. ....+..+ ....-.|.+|.|.+-...| .+++..|.+
T Consensus 150 l~V~---------~~~~~~~~----~~~~h~IdhNyF~~rp~~g-------------------------~NggEtIRiG~ 191 (425)
T PF14592_consen 150 LAVR---------VILNGSQS----IANYHRIDHNYFGPRPPKG-------------------------GNGGETIRIGT 191 (425)
T ss_dssp EEE-----------S--SS-----------EEES-EEE-E---S-------------------------SS---SEEE-S
T ss_pred EEEE---------ecccCccc----cccCceEEeccccccCCCC-------------------------CCCceeEEEec
Confidence 2210 00000000 0012234555554211000 001111111
Q ss_pred ----EecCceEEEeeEEEecccc-cEEEecCCCceEEceEEEcCccccEEEEecceeEEeeeEEeecc----eeeEEEec
Q psy675 296 ----FGEGRGLIEHNNIYGNALA-GIQIRTSSDPIVRHNKIHHGQHGGVYVHEKGVGLIEENEVYANT----LAGVWITT 366 (1175)
Q Consensus 296 ----~~~~~~~i~~n~I~~n~~~-GI~i~~~s~~~i~~n~i~~~~~~GI~v~~~s~~~i~~n~i~~n~----~~GI~v~~ 366 (1175)
...+..+|+.|.+..+... =|.-..++..++++|+|.++. .+|.++-....++++|.|-++. ..||.|.+
T Consensus 192 S~~S~~~s~t~Ve~NlFe~cdGE~EIISvKS~~N~ir~Ntf~es~-G~ltlRHGn~n~V~gN~FiGng~~~~tGGIRIi~ 270 (425)
T PF14592_consen 192 SHSSMSDSNTTVENNLFERCDGEVEIISVKSSDNTIRNNTFRESQ-GSLTLRHGNRNTVEGNVFIGNGVKEGTGGIRIIG 270 (425)
T ss_dssp STT-B-----EEES-EEEEE-SSSEEEEEESBT-EEES-EEES-S-SEEEEEE-SS-EEES-EEEE-SSSS-B--EEE-S
T ss_pred ccccccccceeeecchhhhcCCceeEEEeecCCceEeccEEEecc-ceEEEecCCCceEeccEEecCCCcCCCCceEEec
Confidence 1124566677777666533 233335677888899998887 7788888888889999888875 24888877
Q ss_pred CCCceEeeeEEEeCce
Q psy675 367 GSAPVLRRNRIHSGKQ 382 (1175)
Q Consensus 367 ~s~~~i~~n~i~~~~~ 382 (1175)
... +|.+|-|.+.++
T Consensus 271 ~~H-~I~nNY~~gl~g 285 (425)
T PF14592_consen 271 EGH-TIYNNYFEGLTG 285 (425)
T ss_dssp BS--EEES-EEEESSB
T ss_pred CCc-EEEcceeecccc
Confidence 554 677888877754
No 27
>PLN02916 pectinesterase family protein
Probab=99.25 E-value=3e-10 Score=132.35 Aligned_cols=150 Identities=16% Similarity=0.278 Sum_probs=109.9
Q ss_pred CCCCCCcchHHHHHhcCccc---CCCccEEEEeCceeeeeEEEECc--c-eEEEecCCCCcceeEEEecCC---------
Q psy675 65 GRKLAHFDTIQAALDHGDEL---GQSAPLVFVHSGVYRGEFLVLDS--D-VIIIGAAPGNVAESVILERDT--------- 129 (1175)
Q Consensus 65 ~~~~~~~~tIq~Al~~a~~g---d~~~~~I~v~~G~Y~e~~l~I~k--~-v~l~G~g~g~~~~~v~i~~~~--------- 129 (1175)
+...++|+|||+||++++.. ...+.+|+|+||+|+| .|.|++ | |+|+|+++.. ++|....
T Consensus 193 ~dGsG~f~TIq~AI~a~P~~~~~~~~r~vI~Ik~GvY~E-~V~I~~~k~~i~l~G~g~~~----TiIt~~~~~~~g~~T~ 267 (502)
T PLN02916 193 RDGSGTHRTINQALAALSRMGKSRTNRVIIYVKAGVYNE-KVEIDRHMKNVMFVGDGMDK----TIITNNRNVPDGSTTY 267 (502)
T ss_pred CCCCCCccCHHHHHHhcccccCCCCceEEEEEeCceeeE-EEEecCCCceEEEEecCCCC----cEEEeCCccCCCCcce
Confidence 45678999999999999852 2346789999999998 999964 3 9999998754 3554321
Q ss_pred -CceEEEecCceeeEEeeEEEEeCCCCCccccccceeEEEECCCcceEEeeeEEEeCCCCCeEEEEEccCccceEeeeeE
Q psy675 130 -ESTVMFVEGAKNAYLGHVTLKFSPEAPSTVQHHKHYCLEVGEHATPTIDHCIIRSTSVVGAAVCVSGVCASPTLRHCDI 208 (1175)
Q Consensus 130 -~~~v~~~~g~~~~~l~~lti~~~~~~~~~~~~~~~~~i~v~~~~~~~i~~c~i~~~~~~g~~v~v~g~~a~~~i~~c~i 208 (1175)
..++.+. ++++..++|||++..... .+...++.+. .....+.+|.|.+.. .++++.. .+-.+++|.|
T Consensus 268 ~SAT~~v~--~~~F~A~nitf~Ntag~~----~~QAVALrv~-~D~a~fy~C~f~G~Q---DTLy~~~--~Rqyy~~C~I 335 (502)
T PLN02916 268 SSATFGVS--GDGFWARDITFENTAGPH----KHQAVALRVS-SDLSVFYRCSFKGYQ---DTLFVHS--LRQFYRDCHI 335 (502)
T ss_pred eeEEEEEE--CCCEEEEeeEEEeCCCCC----CCceEEEEEc-CCcEEEEeeeEeccC---ceeEeCC--CCEEEEecEE
Confidence 1244444 688999999999875321 1112356665 478889999999854 4677653 5788999999
Q ss_pred ecCcceeEEEeeceeEEEEeeEEEec
Q psy675 209 SDCENVGLYVTDYAQGLYEDNEISRN 234 (1175)
Q Consensus 209 ~~~~~~GI~v~~~s~~~ie~c~i~~~ 234 (1175)
++.- =++.+.+.+.+++|+|...
T Consensus 336 ~GtV---DFIFG~a~avFq~C~I~~~ 358 (502)
T PLN02916 336 YGTI---DFIFGDAAVVFQNCDIFVR 358 (502)
T ss_pred eccc---ceeccCceEEEecCEEEEe
Confidence 8764 3677888999999998753
No 28
>PLN02933 Probable pectinesterase/pectinesterase inhibitor
Probab=99.25 E-value=3.5e-10 Score=132.83 Aligned_cols=150 Identities=16% Similarity=0.279 Sum_probs=112.2
Q ss_pred CCCCCCcchHHHHHhcCcccCCCccEEEEeCceeeeeEEEECc--c-eEEEecCCCCcceeEEEecC----------CCc
Q psy675 65 GRKLAHFDTIQAALDHGDELGQSAPLVFVHSGVYRGEFLVLDS--D-VIIIGAAPGNVAESVILERD----------TES 131 (1175)
Q Consensus 65 ~~~~~~~~tIq~Al~~a~~gd~~~~~I~v~~G~Y~e~~l~I~k--~-v~l~G~g~g~~~~~v~i~~~----------~~~ 131 (1175)
+...++|+|||+||++++.....+.+|+|+||+|+| .|.|++ + |+|+|++++.+ +|... ...
T Consensus 224 ~dGsG~f~TIq~Ai~a~P~~~~~r~vI~Ik~GvY~E-~V~I~~~k~~itl~G~g~~~T----iIt~~~~~~dg~~T~~Sa 298 (530)
T PLN02933 224 IDGTGNFTTINEAVSAAPNSSETRFIIYIKGGEYFE-NVELPKKKTMIMFIGDGIGKT----VIKANRSRIDGWSTFQTA 298 (530)
T ss_pred CCCCCCccCHHHHHHhchhcCCCcEEEEEcCceEEE-EEEecCCCceEEEEEcCCCCc----EEEeCCccCCCCccccce
Confidence 457789999999999999876567899999999998 999964 3 99999987642 55432 123
Q ss_pred eEEEecCceeeEEeeEEEEeCCCCCccccccceeEEEECCCcceEEeeeEEEeCCCCCeEEEEEccCccceEeeeeEecC
Q psy675 132 TVMFVEGAKNAYLGHVTLKFSPEAPSTVQHHKHYCLEVGEHATPTIDHCIIRSTSVVGAAVCVSGVCASPTLRHCDISDC 211 (1175)
Q Consensus 132 ~v~~~~g~~~~~l~~lti~~~~~~~~~~~~~~~~~i~v~~~~~~~i~~c~i~~~~~~g~~v~v~g~~a~~~i~~c~i~~~ 211 (1175)
++.+. ++++..++|||++..... .+...++.+. +....+.+|.|.+.. ..+++. ..+-.+++|.|++.
T Consensus 299 T~~v~--a~~F~a~nitf~Ntag~~----~~QAVAlrv~-~Dra~fy~C~f~G~Q---DTLy~~--~~Rqyy~~C~IeGt 366 (530)
T PLN02933 299 TVGVK--GKGFIAKDISFVNYAGPA----KHQAVALRSG-SDHSAFYRCEFDGYQ---DTLYVH--SAKQFYRECDIYGT 366 (530)
T ss_pred EEEEE--CCCEEEEeeEEEECCCCC----CCceEEEEEc-CCcEEEEEeEEEecc---cccccC--CCceEEEeeEEecc
Confidence 45555 689999999999875321 1112345555 478899999999864 467765 35789999999876
Q ss_pred cceeEEEeeceeEEEEeeEEEec
Q psy675 212 ENVGLYVTDYAQGLYEDNEISRN 234 (1175)
Q Consensus 212 ~~~GI~v~~~s~~~ie~c~i~~~ 234 (1175)
- =++.+.+.+.+++|+|...
T Consensus 367 V---DFIFG~a~avFq~C~i~~~ 386 (530)
T PLN02933 367 I---DFIFGNAAVVFQNCSLYAR 386 (530)
T ss_pred c---ceeccCceEEEeccEEEEe
Confidence 5 3677888999999999753
No 29
>PLN02708 Probable pectinesterase/pectinesterase inhibitor
Probab=99.25 E-value=3.4e-10 Score=135.19 Aligned_cols=149 Identities=13% Similarity=0.274 Sum_probs=111.3
Q ss_pred CCCCCCcchHHHHHhcCccc-CCCccEEEEeCceeeeeEEEECc---ceEEEecCCCCcceeEEEecCC-----------
Q psy675 65 GRKLAHFDTIQAALDHGDEL-GQSAPLVFVHSGVYRGEFLVLDS---DVIIIGAAPGNVAESVILERDT----------- 129 (1175)
Q Consensus 65 ~~~~~~~~tIq~Al~~a~~g-d~~~~~I~v~~G~Y~e~~l~I~k---~v~l~G~g~g~~~~~v~i~~~~----------- 129 (1175)
+...++|+|||+||+++++. ...+.+|+|+||+|+| .|.|++ .|+|+|++++. ++|.+..
T Consensus 247 ~dGsg~f~TIq~Av~a~p~~~~~~r~vI~vk~GvY~E-~V~i~~~k~~v~l~G~g~~~----TiIt~~~~~~~~g~~T~~ 321 (553)
T PLN02708 247 KDGNCCYKTVQEAVNAAPDNNGDRKFVIRIKEGVYEE-TVRVPLEKKNVVFLGDGMGK----TVITGSLNVGQPGISTYN 321 (553)
T ss_pred CCCCCCccCHHHHHHhhhhccCCccEEEEEeCceEEe-eeeecCCCccEEEEecCCCc----eEEEecCccCCCCcCccc
Confidence 56788999999999999984 2457799999999998 899964 39999999764 3554321
Q ss_pred CceEEEecCceeeEEeeEEEEeCCCCCccccccceeEEEECCCcceEEeeeEEEeCCCCCeEEEEEccCccceEeeeeEe
Q psy675 130 ESTVMFVEGAKNAYLGHVTLKFSPEAPSTVQHHKHYCLEVGEHATPTIDHCIIRSTSVVGAAVCVSGVCASPTLRHCDIS 209 (1175)
Q Consensus 130 ~~~v~~~~g~~~~~l~~lti~~~~~~~~~~~~~~~~~i~v~~~~~~~i~~c~i~~~~~~g~~v~v~g~~a~~~i~~c~i~ 209 (1175)
..++.+. ++++.+++|||++...... +.-.++.+. .....+.+|.|.+.. .++++.+ .+-.+++|.|+
T Consensus 322 saT~~v~--~~~f~a~~it~~Ntag~~~----~QAVAlrv~-~D~~~f~~c~~~G~Q---DTLy~~~--~rq~y~~C~I~ 389 (553)
T PLN02708 322 TATVGVL--GDGFMARDLTIQNTAGPDA----HQAVAFRSD-SDLSVIENCEFLGNQ---DTLYAHS--LRQFYKSCRIQ 389 (553)
T ss_pred eEEEEEE--cCCeEEEeeEEEcCCCCCC----CceEEEEec-CCcEEEEeeeeeecc---ccceeCC--CceEEEeeEEe
Confidence 1344454 6899999999998754211 112345555 468899999999854 5688753 57789999998
Q ss_pred cCcceeEEEeeceeEEEEeeEEEe
Q psy675 210 DCENVGLYVTDYAQGLYEDNEISR 233 (1175)
Q Consensus 210 ~~~~~GI~v~~~s~~~ie~c~i~~ 233 (1175)
+.- =++.+.+.+.|++|+|..
T Consensus 390 GtV---DFIFG~a~avfq~c~i~~ 410 (553)
T PLN02708 390 GNV---DFIFGNSAAVFQDCAILI 410 (553)
T ss_pred ecC---CEEecCceEEEEccEEEE
Confidence 764 367788899999999974
No 30
>PLN02745 Putative pectinesterase/pectinesterase inhibitor
Probab=99.24 E-value=3.9e-10 Score=135.36 Aligned_cols=150 Identities=14% Similarity=0.236 Sum_probs=112.6
Q ss_pred CCCCCCcchHHHHHhcCcccCCCccEEEEeCceeeeeEEEECcc---eEEEecCCCCcceeEEEecC----------CCc
Q psy675 65 GRKLAHFDTIQAALDHGDELGQSAPLVFVHSGVYRGEFLVLDSD---VIIIGAAPGNVAESVILERD----------TES 131 (1175)
Q Consensus 65 ~~~~~~~~tIq~Al~~a~~gd~~~~~I~v~~G~Y~e~~l~I~k~---v~l~G~g~g~~~~~v~i~~~----------~~~ 131 (1175)
....++|+|||+||+++++....+.+|+|+||+|+| .|.|+|+ |+|+|++++.+ +|... ...
T Consensus 291 ~dGsG~f~TIq~Ai~a~P~~~~~r~vI~Ik~GvY~E-~V~I~~~k~~i~l~G~g~~~T----iIt~~~~~~~g~~T~~sa 365 (596)
T PLN02745 291 KDGSGNFTTISDALAAMPAKYEGRYVIYVKQGIYDE-TVTVDKKMVNVTMYGDGSQKT----IVTGNKNFADGVRTFRTA 365 (596)
T ss_pred CCCCCCcccHHHHHHhccccCCceEEEEEeCCeeEE-EEEEcCCCceEEEEecCCCce----EEEECCcccCCCcceeeE
Confidence 456789999999999999876567899999999998 8999653 99999987642 45432 123
Q ss_pred eEEEecCceeeEEeeEEEEeCCCCCccccccceeEEEECCCcceEEeeeEEEeCCCCCeEEEEEccCccceEeeeeEecC
Q psy675 132 TVMFVEGAKNAYLGHVTLKFSPEAPSTVQHHKHYCLEVGEHATPTIDHCIIRSTSVVGAAVCVSGVCASPTLRHCDISDC 211 (1175)
Q Consensus 132 ~v~~~~g~~~~~l~~lti~~~~~~~~~~~~~~~~~i~v~~~~~~~i~~c~i~~~~~~g~~v~v~g~~a~~~i~~c~i~~~ 211 (1175)
++.+. ++++..++|||++..... .+...++.+. .....+.+|.|.+.. .++++. ..+-.+++|.|++.
T Consensus 366 T~~v~--~~~F~a~nitf~Ntag~~----~~QAVAl~v~-~Dr~~f~~c~~~G~Q---DTLy~~--~~Rqyy~~C~I~Gt 433 (596)
T PLN02745 366 TFVAL--GEGFMAKSMGFRNTAGPE----KHQAVAIRVQ-SDRSIFLNCRFEGYQ---DTLYAQ--THRQFYRSCVITGT 433 (596)
T ss_pred EEEEE--cCCEEEEeeEEEECCCCC----CCceEEEEEc-CCcEEEEeeEEeecc---cccccC--CCcEEEEeeEEEee
Confidence 44444 689999999999875321 1112356655 478899999999864 467765 35789999999876
Q ss_pred cceeEEEeeceeEEEEeeEEEec
Q psy675 212 ENVGLYVTDYAQGLYEDNEISRN 234 (1175)
Q Consensus 212 ~~~GI~v~~~s~~~ie~c~i~~~ 234 (1175)
- =++.+.+.+.|++|+|...
T Consensus 434 V---DFIFG~a~avf~~C~i~~~ 453 (596)
T PLN02745 434 I---DFIFGDAAAIFQNCLIFVR 453 (596)
T ss_pred c---cEEecceeEEEEecEEEEe
Confidence 5 3778889999999999753
No 31
>PLN02201 probable pectinesterase/pectinesterase inhibitor
Probab=99.24 E-value=3.7e-10 Score=132.87 Aligned_cols=149 Identities=13% Similarity=0.280 Sum_probs=112.2
Q ss_pred CCCCCCcchHHHHHhcCcccCCCccEEEEeCceeeeeEEEECcc---eEEEecCCCCcceeEEEecC----------CCc
Q psy675 65 GRKLAHFDTIQAALDHGDELGQSAPLVFVHSGVYRGEFLVLDSD---VIIIGAAPGNVAESVILERD----------TES 131 (1175)
Q Consensus 65 ~~~~~~~~tIq~Al~~a~~gd~~~~~I~v~~G~Y~e~~l~I~k~---v~l~G~g~g~~~~~v~i~~~----------~~~ 131 (1175)
+...++|+|||+||+++++....+.+|+|+||+|+| .|.|+++ |+|+|++++.+ +|... ..+
T Consensus 212 ~dGsG~f~TIq~Ai~a~P~~~~~r~vI~Ik~GvY~E-~V~I~~~k~~i~l~G~g~~~T----iIt~~~~~~~g~~T~~SA 286 (520)
T PLN02201 212 ADGTGNFTTIMDAVLAAPDYSTKRYVIYIKKGVYLE-NVEIKKKKWNIMMVGDGIDAT----VITGNRSFIDGWTTFRSA 286 (520)
T ss_pred CCCCCCccCHHHHHHhchhcCCCcEEEEEeCceeEE-EEEecCCCceEEEEecCCCCc----EEEeCCccCCCCcccceE
Confidence 446789999999999999876677899999999998 9999653 99999987643 55432 123
Q ss_pred eEEEecCceeeEEeeEEEEeCCCCCccccccceeEEEECCCcceEEeeeEEEeCCCCCeEEEEEccCccceEeeeeEecC
Q psy675 132 TVMFVEGAKNAYLGHVTLKFSPEAPSTVQHHKHYCLEVGEHATPTIDHCIIRSTSVVGAAVCVSGVCASPTLRHCDISDC 211 (1175)
Q Consensus 132 ~v~~~~g~~~~~l~~lti~~~~~~~~~~~~~~~~~i~v~~~~~~~i~~c~i~~~~~~g~~v~v~g~~a~~~i~~c~i~~~ 211 (1175)
++.+. ++++..++|||+++.... .++..++.+. +....+.+|.|.+.. .++++.. .+-.+++|.|++.
T Consensus 287 T~~v~--~~~F~a~nitf~Ntag~~----~~QAVAlrv~-~D~~~fy~C~f~G~Q---DTLy~~~--~Rqyy~~C~I~Gt 354 (520)
T PLN02201 287 TFAVS--GRGFIARDITFQNTAGPE----KHQAVALRSD-SDLSVFYRCAMRGYQ---DTLYTHT--MRQFYRECRITGT 354 (520)
T ss_pred EEEEE--CCCeEEEeeEEEECCCCC----CCceEEEEEc-CCcEEEEeeeeeccC---CeeEeCC--CCEEEEeeEEeec
Confidence 44454 689999999999885421 1112356665 368889999999854 5687753 5788999999876
Q ss_pred cceeEEEeeceeEEEEeeEEEe
Q psy675 212 ENVGLYVTDYAQGLYEDNEISR 233 (1175)
Q Consensus 212 ~~~GI~v~~~s~~~ie~c~i~~ 233 (1175)
- =++.+.+.+.+++|+|..
T Consensus 355 V---DFIFG~a~avf~~C~i~~ 373 (520)
T PLN02201 355 V---DFIFGDATAVFQNCQILA 373 (520)
T ss_pred c---cEEecCceEEEEccEEEE
Confidence 4 467788899999999975
No 32
>PLN02995 Probable pectinesterase/pectinesterase inhibitor
Probab=99.24 E-value=3.7e-10 Score=134.27 Aligned_cols=150 Identities=16% Similarity=0.273 Sum_probs=108.0
Q ss_pred CCCCCCcchHHHHHhcCccc--CCCccEEEEeCceeeeeEEEEC--cc-eEEEecCCCCcceeEEEecCC----------
Q psy675 65 GRKLAHFDTIQAALDHGDEL--GQSAPLVFVHSGVYRGEFLVLD--SD-VIIIGAAPGNVAESVILERDT---------- 129 (1175)
Q Consensus 65 ~~~~~~~~tIq~Al~~a~~g--d~~~~~I~v~~G~Y~e~~l~I~--k~-v~l~G~g~g~~~~~v~i~~~~---------- 129 (1175)
+...++|+|||+||+++++. ...+.+|+|+||+|+| .|+|+ || |+|+|++++. ++|.+..
T Consensus 229 ~dGsG~f~TIq~Ai~a~p~~~~~~~r~vI~Ik~G~Y~E-~V~i~~~k~~i~l~G~g~~~----TvIt~~~~~~~~~~T~~ 303 (539)
T PLN02995 229 KDGSGHFNTVQAAIDVAGRRKVTSGRFVIYVKRGIYQE-NINVRLNNDDIMLVGDGMRS----TIITGGRSVKGGYTTYN 303 (539)
T ss_pred CCCCCCccCHHHHHHhcccccCCCceEEEEEeCCEeEE-EEEecCCCCcEEEEEcCCCC----eEEEeCCccCCCCcccc
Confidence 45678999999999999842 3457899999999998 89995 44 9999998754 3564321
Q ss_pred CceEEEecCceeeEEeeEEEEeCCCCCccccccceeEEEECCCcceEEeeeEEEeCCCCCeEEEEEccCccceEeeeeEe
Q psy675 130 ESTVMFVEGAKNAYLGHVTLKFSPEAPSTVQHHKHYCLEVGEHATPTIDHCIIRSTSVVGAAVCVSGVCASPTLRHCDIS 209 (1175)
Q Consensus 130 ~~~v~~~~g~~~~~l~~lti~~~~~~~~~~~~~~~~~i~v~~~~~~~i~~c~i~~~~~~g~~v~v~g~~a~~~i~~c~i~ 209 (1175)
..++.+. ++++..++|||++..... .+...++.+. +.+..+.+|.|.+.. .++++.. .+-.+++|.|+
T Consensus 304 SaT~~v~--~~~F~a~nitf~Ntag~~----~~QAVAlrv~-~Dr~~f~~c~~~G~Q---DTLy~~~--~Rqyy~~C~I~ 371 (539)
T PLN02995 304 SATAGIE--GLHFIAKGITFRNTAGPA----KGQAVALRSS-SDLSIFYKCSIEGYQ---DTLMVHS--QRQFYRECYIY 371 (539)
T ss_pred eEEEEEE--CCCeEEEeeEEEeCCCCC----CCceEEEEEc-CCceeEEcceEeccc---chhccCC--CceEEEeeEEe
Confidence 1234444 688999999999875321 1112345555 467888999998854 4577643 46788888888
Q ss_pred cCcceeEEEeeceeEEEEeeEEEec
Q psy675 210 DCENVGLYVTDYAQGLYEDNEISRN 234 (1175)
Q Consensus 210 ~~~~~GI~v~~~s~~~ie~c~i~~~ 234 (1175)
+.- =++.+.+.+.+++|+|...
T Consensus 372 GtV---DFIFG~a~avf~~C~i~~~ 393 (539)
T PLN02995 372 GTV---DFIFGNAAAVFQNCIILPR 393 (539)
T ss_pred ecc---ceEecccceEEeccEEEEe
Confidence 754 3677788888888888753
No 33
>PLN02217 probable pectinesterase/pectinesterase inhibitor
Probab=99.24 E-value=3.6e-10 Score=135.92 Aligned_cols=150 Identities=15% Similarity=0.304 Sum_probs=112.6
Q ss_pred CCCCCCcchHHHHHhcCcccCCCccEEEEeCceeeeeEEEECcc---eEEEecCCCCcceeEEEecC----------CCc
Q psy675 65 GRKLAHFDTIQAALDHGDELGQSAPLVFVHSGVYRGEFLVLDSD---VIIIGAAPGNVAESVILERD----------TES 131 (1175)
Q Consensus 65 ~~~~~~~~tIq~Al~~a~~gd~~~~~I~v~~G~Y~e~~l~I~k~---v~l~G~g~g~~~~~v~i~~~----------~~~ 131 (1175)
+...++|+|||+||++++++...+.+|+|+||+|+| .|.|+|+ |+|+|++++. ++|.+. ...
T Consensus 256 ~dGsG~f~TIq~Av~a~P~~~~~r~vI~Ik~GvY~E-~V~I~~~k~~i~l~Gdg~~~----TiIt~~~~~~dg~~T~~SA 330 (670)
T PLN02217 256 QDGSGQYKTINEALNFVPKKKNTTFVVHIKAGIYKE-YVQVNRSMTHLVFIGDGPDK----TVISGSKSYKDGITTYKTA 330 (670)
T ss_pred CCCCCCccCHHHHHHhccccCCceEEEEEeCCceEE-EEEEcCCCCcEEEEecCCCC----eEEEcCCccCCCCCccceE
Confidence 456789999999999999986677899999999998 9999764 9999998764 355432 123
Q ss_pred eEEEecCceeeEEeeEEEEeCCCCCccccccceeEEEECCCcceEEeeeEEEeCCCCCeEEEEEccCccceEeeeeEecC
Q psy675 132 TVMFVEGAKNAYLGHVTLKFSPEAPSTVQHHKHYCLEVGEHATPTIDHCIIRSTSVVGAAVCVSGVCASPTLRHCDISDC 211 (1175)
Q Consensus 132 ~v~~~~g~~~~~l~~lti~~~~~~~~~~~~~~~~~i~v~~~~~~~i~~c~i~~~~~~g~~v~v~g~~a~~~i~~c~i~~~ 211 (1175)
++.+. ++++..++|||++..... .++..++.+. .....+.+|.|.+.+ ..+++.. .+-.+++|.|++.
T Consensus 331 T~~v~--g~~F~a~nitf~Ntag~~----~~QAVAlrv~-~Dra~fy~C~f~G~Q---DTLy~~~--~Rqyy~~C~I~Gt 398 (670)
T PLN02217 331 TVAIV--GDHFIAKNIGFENTAGAI----KHQAVAIRVL-SDESIFYNCKFDGYQ---DTLYAHS--HRQFYRDCTISGT 398 (670)
T ss_pred EEEEE--CCCeEEEeeEEEeCCCCC----CCceEEEEec-CCcEEEEcceeeecc---chhccCC--CcEEEEeCEEEEe
Confidence 44454 689999999999875421 1112345555 478889999998853 4677653 5788999999876
Q ss_pred cceeEEEeeceeEEEEeeEEEec
Q psy675 212 ENVGLYVTDYAQGLYEDNEISRN 234 (1175)
Q Consensus 212 ~~~GI~v~~~s~~~ie~c~i~~~ 234 (1175)
- =++.+.+.+.|++|+|...
T Consensus 399 V---DFIFG~a~avfq~C~I~~r 418 (670)
T PLN02217 399 I---DFLFGDAAAVFQNCTLLVR 418 (670)
T ss_pred c---cEEecCceEEEEccEEEEc
Confidence 4 4677888899999999753
No 34
>PLN02488 probable pectinesterase/pectinesterase inhibitor
Probab=99.23 E-value=4.4e-10 Score=130.00 Aligned_cols=150 Identities=15% Similarity=0.247 Sum_probs=112.1
Q ss_pred CCCCCCcchHHHHHhcCcccCCCccEEEEeCceeeeeEEEEC--cc-eEEEecCCCCcceeEEEecCC----------Cc
Q psy675 65 GRKLAHFDTIQAALDHGDELGQSAPLVFVHSGVYRGEFLVLD--SD-VIIIGAAPGNVAESVILERDT----------ES 131 (1175)
Q Consensus 65 ~~~~~~~~tIq~Al~~a~~gd~~~~~I~v~~G~Y~e~~l~I~--k~-v~l~G~g~g~~~~~v~i~~~~----------~~ 131 (1175)
+...++|+|||+||++++++...+.+|+|+||+|+| .|.|+ |+ |+|+|++++. ++|.... ..
T Consensus 203 ~dGsG~f~TIq~AI~a~P~~~~~r~vI~Ik~GvY~E-~V~I~~~k~nItliGdg~~~----TiIt~n~~~~~g~~T~~SA 277 (509)
T PLN02488 203 KDGSGKYNTVNAAIAAAPEHSRKRFVIYIKTGVYDE-IVRIGSTKPNLTLIGDGQDS----TIITGNLSASNGKRTFYTA 277 (509)
T ss_pred CCCCCCccCHHHHHHhchhcCCCcEEEEEeCCeeEE-EEEecCCCccEEEEecCCCc----eEEEEcccccCCCCceeeE
Confidence 456789999999999999876567899999999998 99995 44 9999998764 2554321 12
Q ss_pred eEEEecCceeeEEeeEEEEeCCCCCccccccceeEEEECCCcceEEeeeEEEeCCCCCeEEEEEccCccceEeeeeEecC
Q psy675 132 TVMFVEGAKNAYLGHVTLKFSPEAPSTVQHHKHYCLEVGEHATPTIDHCIIRSTSVVGAAVCVSGVCASPTLRHCDISDC 211 (1175)
Q Consensus 132 ~v~~~~g~~~~~l~~lti~~~~~~~~~~~~~~~~~i~v~~~~~~~i~~c~i~~~~~~g~~v~v~g~~a~~~i~~c~i~~~ 211 (1175)
++.+. ++++..++|||++..... .+...++.+. .....+.+|.|.+.. .++++.. .+-.+++|.|++.
T Consensus 278 Tv~v~--g~gF~A~nitf~Ntag~~----~~QAVALrv~-~Dra~Fy~C~f~GyQ---DTLy~~~--~RqyyrdC~I~Gt 345 (509)
T PLN02488 278 TVASN--GDGFIGIDMCFRNTAGPA----KGPAVALRVS-GDMSVIYRCRIEGYQ---DALYPHR--DRQFYRECFITGT 345 (509)
T ss_pred EEEEE--cCCeEEEeeEEEECCCCC----CCceEEEEec-CCcEEEEcceeeccC---cceeeCC--CCEEEEeeEEeec
Confidence 34444 688999999999875421 1112345555 478889999999854 5677753 5789999999876
Q ss_pred cceeEEEeeceeEEEEeeEEEec
Q psy675 212 ENVGLYVTDYAQGLYEDNEISRN 234 (1175)
Q Consensus 212 ~~~GI~v~~~s~~~ie~c~i~~~ 234 (1175)
- =++.+.+.+.+++|+|...
T Consensus 346 V---DFIFG~a~avFq~C~I~sr 365 (509)
T PLN02488 346 V---DFICGNAAAVFQFCQIVAR 365 (509)
T ss_pred c---ceEecceEEEEEccEEEEe
Confidence 4 3677889999999999753
No 35
>PLN02990 Probable pectinesterase/pectinesterase inhibitor
Probab=99.23 E-value=4.4e-10 Score=134.52 Aligned_cols=149 Identities=17% Similarity=0.267 Sum_probs=111.5
Q ss_pred CCCCCCcchHHHHHhcCcccCCCccEEEEeCceeeeeEEEECc--c-eEEEecCCCCcceeEEEecC-----------CC
Q psy675 65 GRKLAHFDTIQAALDHGDELGQSAPLVFVHSGVYRGEFLVLDS--D-VIIIGAAPGNVAESVILERD-----------TE 130 (1175)
Q Consensus 65 ~~~~~~~~tIq~Al~~a~~gd~~~~~I~v~~G~Y~e~~l~I~k--~-v~l~G~g~g~~~~~v~i~~~-----------~~ 130 (1175)
+...++|+|||+||++++++...+.+|+|+||+|+| .|.|+| | |+|+|++++. ++|.+. ..
T Consensus 265 ~dGsG~f~TIq~Av~a~p~~~~~r~vI~Ik~GvY~E-~V~i~~~k~~i~l~G~g~~~----TiIt~~~~~~~g~~~T~~s 339 (572)
T PLN02990 265 QDGSGQYKTINEALNAVPKANQKPFVIYIKQGVYNE-KVDVTKKMTHVTFIGDGPTK----TKITGSLNFYIGKVKTYLT 339 (572)
T ss_pred CCCCCCCcCHHHHHhhCcccCCceEEEEEeCceeEE-EEEecCCCCcEEEEecCCCc----eEEEeccccCCCCccceee
Confidence 556789999999999998876667899999999998 999964 3 9999998764 355421 12
Q ss_pred ceEEEecCceeeEEeeEEEEeCCCCCccccccceeEEEECCCcceEEeeeEEEeCCCCCeEEEEEccCccceEeeeeEec
Q psy675 131 STVMFVEGAKNAYLGHVTLKFSPEAPSTVQHHKHYCLEVGEHATPTIDHCIIRSTSVVGAAVCVSGVCASPTLRHCDISD 210 (1175)
Q Consensus 131 ~~v~~~~g~~~~~l~~lti~~~~~~~~~~~~~~~~~i~v~~~~~~~i~~c~i~~~~~~g~~v~v~g~~a~~~i~~c~i~~ 210 (1175)
.++.+. ++++..++|||++..... .++..++.+. +....+.+|.|.+.. .++++.. .+-.+++|.|++
T Consensus 340 aT~~v~--~~~F~a~nitf~Ntag~~----~~QAVAlrv~-~D~~~f~~c~~~G~Q---DTLy~~~--~Rqyy~~C~I~G 407 (572)
T PLN02990 340 ATVAIN--GDHFTAKNIGFENTAGPE----GHQAVALRVS-ADYAVFYNCQIDGYQ---DTLYVHS--HRQFFRDCTVSG 407 (572)
T ss_pred eEEEEE--cCCEEEEeeEEEeCCCCC----CCceEEEEEc-CCcEEEEeeeEeccc---chhccCC--CcEEEEeeEEec
Confidence 334444 689999999999875321 1112356655 467889999999853 4677653 578899999987
Q ss_pred CcceeEEEeeceeEEEEeeEEEe
Q psy675 211 CENVGLYVTDYAQGLYEDNEISR 233 (1175)
Q Consensus 211 ~~~~GI~v~~~s~~~ie~c~i~~ 233 (1175)
.- =++.+.+.+.+++|+|..
T Consensus 408 tV---DFIFG~a~avf~~C~i~~ 427 (572)
T PLN02990 408 TV---DFIFGDAKVVLQNCNIVV 427 (572)
T ss_pred cc---ceEccCceEEEEccEEEE
Confidence 64 367788899999999975
No 36
>PLN02170 probable pectinesterase/pectinesterase inhibitor
Probab=99.22 E-value=6.6e-10 Score=130.01 Aligned_cols=150 Identities=16% Similarity=0.273 Sum_probs=110.2
Q ss_pred CCCCCCcchHHHHHhcCcc-cCCCccEEEEeCceeeeeEEEEC--cc-eEEEecCCCCcceeEEEecCC----------C
Q psy675 65 GRKLAHFDTIQAALDHGDE-LGQSAPLVFVHSGVYRGEFLVLD--SD-VIIIGAAPGNVAESVILERDT----------E 130 (1175)
Q Consensus 65 ~~~~~~~~tIq~Al~~a~~-gd~~~~~I~v~~G~Y~e~~l~I~--k~-v~l~G~g~g~~~~~v~i~~~~----------~ 130 (1175)
+...++|+|||+||++++| ....+.+|+|+||+|+| .|.|+ || |+|+|++++. ++|.... .
T Consensus 231 ~dGsG~f~TIq~AI~a~~~~~~~~r~vI~Ik~GvY~E-~V~I~~~k~nItl~G~g~~~----TiIt~~~~~~~g~~T~~S 305 (529)
T PLN02170 231 ADGSGTHKTIGEALLSTSLESGGGRTVIYLKAGTYHE-NLNIPTKQKNVMLVGDGKGK----TVIVGSRSNRGGWTTYQT 305 (529)
T ss_pred CCCCCchhhHHHHHHhcccccCCceEEEEEeCCeeEE-EEecCCCCceEEEEEcCCCC----eEEEeCCcCCCCCccccc
Confidence 5577899999999998755 34467899999999998 89995 34 9999998764 3554321 1
Q ss_pred ceEEEecCceeeEEeeEEEEeCCCCCccccccceeEEEECCCcceEEeeeEEEeCCCCCeEEEEEccCccceEeeeeEec
Q psy675 131 STVMFVEGAKNAYLGHVTLKFSPEAPSTVQHHKHYCLEVGEHATPTIDHCIIRSTSVVGAAVCVSGVCASPTLRHCDISD 210 (1175)
Q Consensus 131 ~~v~~~~g~~~~~l~~lti~~~~~~~~~~~~~~~~~i~v~~~~~~~i~~c~i~~~~~~g~~v~v~g~~a~~~i~~c~i~~ 210 (1175)
.++.+. ++++..++|||++...... ++..++.+. +.+..+.+|.|.+.. .+++... .+-.+++|.|++
T Consensus 306 aTv~v~--~~~F~a~nitf~Ntag~~~----~QAVALrv~-gDr~~fy~C~f~GyQ---DTLy~~~--~Rqyy~~C~I~G 373 (529)
T PLN02170 306 ATVAAM--GDGFIARDITFVNSAGPNS----EQAVALRVG-SDKSVVYRCSVEGYQ---DSLYTHS--KRQFYRETDITG 373 (529)
T ss_pred eEEEEE--cCCeEEEeeEEEecCCCCC----CceEEEEec-CCcEEEEeeeEeccC---CcceeCC--CCEEEEeeEEcc
Confidence 345555 6899999999998853211 112356665 467889999998854 4677653 477889999987
Q ss_pred CcceeEEEeeceeEEEEeeEEEec
Q psy675 211 CENVGLYVTDYAQGLYEDNEISRN 234 (1175)
Q Consensus 211 ~~~~GI~v~~~s~~~ie~c~i~~~ 234 (1175)
.- =++.+.+.+.+++|+|...
T Consensus 374 tV---DFIFG~a~avFq~C~I~~~ 394 (529)
T PLN02170 374 TV---DFIFGNSAVVFQSCNIAAR 394 (529)
T ss_pred cc---ceecccceEEEeccEEEEe
Confidence 64 4677888899999999754
No 37
>PLN02713 Probable pectinesterase/pectinesterase inhibitor
Probab=99.22 E-value=4.1e-10 Score=134.57 Aligned_cols=150 Identities=16% Similarity=0.315 Sum_probs=110.8
Q ss_pred CCCCCCcchHHHHHhcCccc---CCCccEEEEeCceeeeeEEEECc--c-eEEEecCCCCcceeEEEecCC---------
Q psy675 65 GRKLAHFDTIQAALDHGDEL---GQSAPLVFVHSGVYRGEFLVLDS--D-VIIIGAAPGNVAESVILERDT--------- 129 (1175)
Q Consensus 65 ~~~~~~~~tIq~Al~~a~~g---d~~~~~I~v~~G~Y~e~~l~I~k--~-v~l~G~g~g~~~~~v~i~~~~--------- 129 (1175)
+...++|+|||+||+++++. ...+.+|+|+||+|+| .|.|++ + |+|+|+++.. ++|.+..
T Consensus 256 ~dGsG~f~TIq~Av~a~p~~~~~~~~~~vI~Ik~G~Y~E-~V~i~~~k~~i~l~G~g~~~----TiIt~~~~~~~g~~T~ 330 (566)
T PLN02713 256 QNGTGNFTTINDAVAAAPNNTDGSNGYFVIYVTAGVYEE-YVSIPKNKKYLMMIGDGINQ----TVITGNRSVVDGWTTF 330 (566)
T ss_pred CCCCCCCCCHHHHHHhhhcccCCCCceEEEEEcCcEEEE-EEEecCCCceEEEEecCCCC----cEEEcCCcccCCCccc
Confidence 45678999999999999875 2345789999999998 999954 3 9999998754 3554321
Q ss_pred -CceEEEecCceeeEEeeEEEEeCCCCCccccccceeEEEECCCcceEEeeeEEEeCCCCCeEEEEEccCccceEeeeeE
Q psy675 130 -ESTVMFVEGAKNAYLGHVTLKFSPEAPSTVQHHKHYCLEVGEHATPTIDHCIIRSTSVVGAAVCVSGVCASPTLRHCDI 208 (1175)
Q Consensus 130 -~~~v~~~~g~~~~~l~~lti~~~~~~~~~~~~~~~~~i~v~~~~~~~i~~c~i~~~~~~g~~v~v~g~~a~~~i~~c~i 208 (1175)
..++.+. ++++..++|||++..... .+...++.+. +....+.+|.|.+.. .++++.. .+-.+++|.|
T Consensus 331 ~SaT~~v~--~~~F~a~nitf~Ntag~~----~~QAVAlrv~-~D~~~fy~C~~~G~Q---DTLy~~~--~Rqyy~~C~I 398 (566)
T PLN02713 331 NSATFAVV--GQNFVAVNITFRNTAGPA----KHQAVALRSG-ADLSTFYSCSFEAYQ---DTLYTHS--LRQFYRECDI 398 (566)
T ss_pred cceeEEEE--CCCeEEEeeEEEeCCCCC----CCceEEEEec-CCcEEEEeeeeccCC---cceEECC--CCEEEEeeEE
Confidence 1345554 689999999999875321 1112345555 467889999998854 5688753 5789999999
Q ss_pred ecCcceeEEEeeceeEEEEeeEEEec
Q psy675 209 SDCENVGLYVTDYAQGLYEDNEISRN 234 (1175)
Q Consensus 209 ~~~~~~GI~v~~~s~~~ie~c~i~~~ 234 (1175)
++.- =++.+.+.+.+++|+|...
T Consensus 399 ~GtV---DFIFG~a~avfq~C~i~~~ 421 (566)
T PLN02713 399 YGTV---DFIFGNAAVVFQNCNLYPR 421 (566)
T ss_pred eccc---ceecccceEEEeccEEEEe
Confidence 8754 4677888999999999753
No 38
>PLN02506 putative pectinesterase/pectinesterase inhibitor
Probab=99.21 E-value=5.3e-10 Score=132.64 Aligned_cols=150 Identities=14% Similarity=0.314 Sum_probs=111.4
Q ss_pred CCCCCCcchHHHHHhcCcccCCCccEEEEeCceeeeeEEEECc--c-eEEEecCCCCcceeEEEecCC----------Cc
Q psy675 65 GRKLAHFDTIQAALDHGDELGQSAPLVFVHSGVYRGEFLVLDS--D-VIIIGAAPGNVAESVILERDT----------ES 131 (1175)
Q Consensus 65 ~~~~~~~~tIq~Al~~a~~gd~~~~~I~v~~G~Y~e~~l~I~k--~-v~l~G~g~g~~~~~v~i~~~~----------~~ 131 (1175)
....++|+|||+||++++.....+.+|+|+||+|+| .|.|+| + |+|+|++++. ++|.... ..
T Consensus 238 ~dGsG~f~TIq~Av~a~p~~~~~r~vI~Vk~GvY~E-~V~I~~~k~~i~l~G~g~~~----tiIt~~~~~~~g~~T~~sa 312 (537)
T PLN02506 238 LDGSGHYRTITEAINEAPNHSNRRYIIYVKKGVYKE-NIDMKKKKTNIMLVGDGIGQ----TVVTGNRNFMQGWTTFRTA 312 (537)
T ss_pred CCCCCCccCHHHHHHhchhcCCCcEEEEEeCCeeeE-EEeccCCCceEEEEEcCCCC----eEEEeCccccCCCCcccce
Confidence 556789999999999998875567899999999998 899964 3 9999998764 3554321 22
Q ss_pred eEEEecCceeeEEeeEEEEeCCCCCccccccceeEEEECCCcceEEeeeEEEeCCCCCeEEEEEccCccceEeeeeEecC
Q psy675 132 TVMFVEGAKNAYLGHVTLKFSPEAPSTVQHHKHYCLEVGEHATPTIDHCIIRSTSVVGAAVCVSGVCASPTLRHCDISDC 211 (1175)
Q Consensus 132 ~v~~~~g~~~~~l~~lti~~~~~~~~~~~~~~~~~i~v~~~~~~~i~~c~i~~~~~~g~~v~v~g~~a~~~i~~c~i~~~ 211 (1175)
++.+. ++++..++|+|++...... +...++.+. +....+.+|.|.+.. .++++.. .+-.+++|.|++.
T Consensus 313 T~~v~--~~~F~a~nit~~Ntag~~~----~QAVAl~v~-~D~~~fy~C~~~G~Q---DTLy~~~--~rqyy~~C~I~Gt 380 (537)
T PLN02506 313 TVAVS--GRGFIARDITFRNTAGPQN----HQAVALRVD-SDQSAFYRCSMEGYQ---DTLYAHS--LRQFYRECEIYGT 380 (537)
T ss_pred EEEEE--cCCeEEEeeEEEeCCCCCC----CceEEEEec-CCcEEEEcceeeccc---ccceecC--CceEEEeeEEecc
Confidence 34444 6889999999998753211 112356665 478889999998854 4677653 4778999999875
Q ss_pred cceeEEEeeceeEEEEeeEEEec
Q psy675 212 ENVGLYVTDYAQGLYEDNEISRN 234 (1175)
Q Consensus 212 ~~~GI~v~~~s~~~ie~c~i~~~ 234 (1175)
- =++.+.+.+.+++|+|...
T Consensus 381 V---DFIFG~a~avfq~C~i~~r 400 (537)
T PLN02506 381 I---DFIFGNGAAVLQNCKIYTR 400 (537)
T ss_pred c---ceEccCceeEEeccEEEEc
Confidence 4 4677888899999998754
No 39
>PLN02484 probable pectinesterase/pectinesterase inhibitor
Probab=99.20 E-value=7.7e-10 Score=132.84 Aligned_cols=151 Identities=17% Similarity=0.291 Sum_probs=112.4
Q ss_pred CCCCCCcchHHHHHhcCcccCCCccEEEEeCceeeeeEEEECc--c-eEEEecCCCCcceeEEEecCC----------Cc
Q psy675 65 GRKLAHFDTIQAALDHGDELGQSAPLVFVHSGVYRGEFLVLDS--D-VIIIGAAPGNVAESVILERDT----------ES 131 (1175)
Q Consensus 65 ~~~~~~~~tIq~Al~~a~~gd~~~~~I~v~~G~Y~e~~l~I~k--~-v~l~G~g~g~~~~~v~i~~~~----------~~ 131 (1175)
+...++|+|||+||++++++...+.+|+|+||+|+|..|.|++ + |+|+|++++. ++|.+.. ..
T Consensus 278 ~dGsG~f~TIq~Ai~a~P~~~~~r~vI~Ik~G~Y~E~~v~i~~~k~ni~l~G~g~~~----TiIt~~~~~~~~~~t~~sa 353 (587)
T PLN02484 278 KDGNGTFKTISEAIKKAPEHSSRRTIIYVKAGRYEENNLKVGRKKTNLMFIGDGKGK----TVITGGKSIFDNLTTFHTA 353 (587)
T ss_pred CCCCCCcccHHHHHHhccccCCCcEEEEEeCCEEEEEEEEECCCCceEEEEecCCCC----eEEecCCcccCCCcccceE
Confidence 4577899999999999999876778999999999972399964 3 9999998754 3565431 12
Q ss_pred eEEEecCceeeEEeeEEEEeCCCCCccccccceeEEEECCCcceEEeeeEEEeCCCCCeEEEEEccCccceEeeeeEecC
Q psy675 132 TVMFVEGAKNAYLGHVTLKFSPEAPSTVQHHKHYCLEVGEHATPTIDHCIIRSTSVVGAAVCVSGVCASPTLRHCDISDC 211 (1175)
Q Consensus 132 ~v~~~~g~~~~~l~~lti~~~~~~~~~~~~~~~~~i~v~~~~~~~i~~c~i~~~~~~g~~v~v~g~~a~~~i~~c~i~~~ 211 (1175)
++.+. ++++..++|||++...... ++..++.+. +....+.+|.|.+.. .++++.. .+-.+++|.|++.
T Consensus 354 T~~v~--~~~F~a~~itf~Ntag~~~----~QAvAlrv~-~D~~~fy~C~~~G~Q---DTLy~~~--~Rqyy~~C~I~Gt 421 (587)
T PLN02484 354 SFAAT--GAGFIARDMTFENWAGPAK----HQAVALRVG-ADHAVVYRCNIIGYQ---DTLYVHS--NRQFFRECDIYGT 421 (587)
T ss_pred EEEEE--cCCEEEEeeEEEECCCCCC----CceEEEEec-CCcEEEEeeeEeccC---cccccCC--CcEEEEecEEEec
Confidence 44444 6899999999998754211 112356665 467889999998854 4677653 5788999999876
Q ss_pred cceeEEEeeceeEEEEeeEEEec
Q psy675 212 ENVGLYVTDYAQGLYEDNEISRN 234 (1175)
Q Consensus 212 ~~~GI~v~~~s~~~ie~c~i~~~ 234 (1175)
- =++.+.+.+.|++|+|...
T Consensus 422 V---DFIFG~a~avfq~C~i~~~ 441 (587)
T PLN02484 422 V---DFIFGNAAVVLQNCSIYAR 441 (587)
T ss_pred c---ceecccceeEEeccEEEEe
Confidence 4 3677888999999999753
No 40
>PLN02468 putative pectinesterase/pectinesterase inhibitor
Probab=99.20 E-value=5.9e-10 Score=133.50 Aligned_cols=150 Identities=14% Similarity=0.265 Sum_probs=111.8
Q ss_pred CCCCCCcchHHHHHhcCcccCCCccEEEEeCceeeeeEEEECcc---eEEEecCCCCcceeEEEecC----------CCc
Q psy675 65 GRKLAHFDTIQAALDHGDELGQSAPLVFVHSGVYRGEFLVLDSD---VIIIGAAPGNVAESVILERD----------TES 131 (1175)
Q Consensus 65 ~~~~~~~~tIq~Al~~a~~gd~~~~~I~v~~G~Y~e~~l~I~k~---v~l~G~g~g~~~~~v~i~~~----------~~~ 131 (1175)
+...++|+|||+||+++++....+.+|+|+||+|+| .|.|+|+ |+|+|+++..+ +|.+. ...
T Consensus 264 ~dGsg~f~tI~~Av~a~p~~~~~~~vI~ik~GvY~E-~V~i~~~k~~i~~~G~g~~~t----iIt~~~~~~dg~~t~~sa 338 (565)
T PLN02468 264 KDGSGKYKTISEALKDVPEKSEKRTIIYVKKGVYFE-NVRVEKKKWNVVMVGDGMSKT----IVSGSLNFVDGTPTFSTA 338 (565)
T ss_pred CCCCCCccCHHHHHHhchhcCCCcEEEEEeCCceEE-EEEecCCCCeEEEEecCCCCC----EEEeCCccCCCCCcccee
Confidence 456789999999999999876677899999999998 9999654 99999997643 45421 113
Q ss_pred eEEEecCceeeEEeeEEEEeCCCCCccccccceeEEEECCCcceEEeeeEEEeCCCCCeEEEEEccCccceEeeeeEecC
Q psy675 132 TVMFVEGAKNAYLGHVTLKFSPEAPSTVQHHKHYCLEVGEHATPTIDHCIIRSTSVVGAAVCVSGVCASPTLRHCDISDC 211 (1175)
Q Consensus 132 ~v~~~~g~~~~~l~~lti~~~~~~~~~~~~~~~~~i~v~~~~~~~i~~c~i~~~~~~g~~v~v~g~~a~~~i~~c~i~~~ 211 (1175)
++.+. ++++.+++|+|++...... +...++.+. .....+.+|.|.+.. .++++.. .+-.+++|.|++.
T Consensus 339 T~~v~--~~~f~a~~itf~Ntag~~~----~QAVAl~v~-~D~~~fy~c~~~G~Q---DTLy~~~--~rq~y~~C~I~Gt 406 (565)
T PLN02468 339 TFAVF--GKGFMARDMGFRNTAGPIK----HQAVALMSS-ADLSVFYRCTMDAFQ---DTLYAHA--QRQFYRECNIYGT 406 (565)
T ss_pred eeeEE--CCCeEEEEEEEEeCCCCCC----CceEEEEEc-CCcEEEEEeEEEecc---chhccCC--CceEEEeeEEecc
Confidence 44444 6889999999998754211 112345555 467889999998854 4677653 5678999999876
Q ss_pred cceeEEEeeceeEEEEeeEEEec
Q psy675 212 ENVGLYVTDYAQGLYEDNEISRN 234 (1175)
Q Consensus 212 ~~~GI~v~~~s~~~ie~c~i~~~ 234 (1175)
- =++.+.+.+.+++|+|...
T Consensus 407 v---DFIFG~a~avfq~c~i~~~ 426 (565)
T PLN02468 407 V---DFIFGNSAVVFQNCNILPR 426 (565)
T ss_pred c---ceeeccceEEEeccEEEEe
Confidence 4 4677888999999999643
No 41
>PLN02301 pectinesterase/pectinesterase inhibitor
Probab=99.19 E-value=4.4e-10 Score=133.35 Aligned_cols=149 Identities=13% Similarity=0.266 Sum_probs=104.5
Q ss_pred CCCCCCcchHHHHHhcCcccCCCccEEEEeCceeeeeEEEECc---ceEEEecCCCCcceeEEEecCC----C------c
Q psy675 65 GRKLAHFDTIQAALDHGDELGQSAPLVFVHSGVYRGEFLVLDS---DVIIIGAAPGNVAESVILERDT----E------S 131 (1175)
Q Consensus 65 ~~~~~~~~tIq~Al~~a~~gd~~~~~I~v~~G~Y~e~~l~I~k---~v~l~G~g~g~~~~~v~i~~~~----~------~ 131 (1175)
+...++|+|||+||++++.....+.+|+|+||+|+| .|.|+| .|+|+|++++.+ +|.+.. + .
T Consensus 242 ~dGsG~f~TIq~Ai~a~P~~~~~r~vI~Ik~G~Y~E-~V~i~~~k~~i~l~G~g~~~T----iIt~~~~~~dg~~T~~Sa 316 (548)
T PLN02301 242 KDGSGKYKTVKEAVASAPDNSKTRYVIYVKKGTYKE-NVEIGKKKKNLMLVGDGMDST----IITGSLNVIDGSTTFRSA 316 (548)
T ss_pred CCCCCCcccHHHHHHhhhhcCCceEEEEEeCceeeE-EEEecCCCceEEEEecCCCCc----EEEeCCccCCCCCceeeE
Confidence 456789999999999999876567799999999998 999965 399999987642 454321 1 2
Q ss_pred eEEEecCceeeEEeeEEEEeCCCCCccccccceeEEEECCCcceEEeeeEEEeCCCCCeEEEEEccCccceEeeeeEecC
Q psy675 132 TVMFVEGAKNAYLGHVTLKFSPEAPSTVQHHKHYCLEVGEHATPTIDHCIIRSTSVVGAAVCVSGVCASPTLRHCDISDC 211 (1175)
Q Consensus 132 ~v~~~~g~~~~~l~~lti~~~~~~~~~~~~~~~~~i~v~~~~~~~i~~c~i~~~~~~g~~v~v~g~~a~~~i~~c~i~~~ 211 (1175)
++.+. ++++..++|+|++..... .+...++.+. .....+.+|.|.+.. .++++.. .+-.+++|.|++.
T Consensus 317 T~~v~--~~~F~a~nitf~Ntag~~----~~QAVAlrv~-~D~~~fy~C~~~G~Q---DTLy~~~--~Rqyy~~C~I~Gt 384 (548)
T PLN02301 317 TVAAV--GDGFIAQDIWFQNTAGPE----KHQAVALRVS-ADQAVINRCRIDAYQ---DTLYAHS--LRQFYRDSYITGT 384 (548)
T ss_pred EEEEE--CCceEEEeeEEEECCCCC----CCceEEEEec-CCcEEEEeeeeeecc---ccceecC--CcEEEEeeEEEec
Confidence 34444 688999999999875321 1112345555 357788888888753 4566643 4567778877765
Q ss_pred cceeEEEeeceeEEEEeeEEEe
Q psy675 212 ENVGLYVTDYAQGLYEDNEISR 233 (1175)
Q Consensus 212 ~~~GI~v~~~s~~~ie~c~i~~ 233 (1175)
- =++.+.+.+.+|+|+|..
T Consensus 385 V---DFIFG~a~avfq~c~i~~ 403 (548)
T PLN02301 385 V---DFIFGNAAVVFQNCKIVA 403 (548)
T ss_pred c---ceecccceeEEeccEEEE
Confidence 3 356677777777777754
No 42
>PLN02197 pectinesterase
Probab=99.16 E-value=9.1e-10 Score=131.48 Aligned_cols=149 Identities=12% Similarity=0.213 Sum_probs=104.3
Q ss_pred CCCCCCcchHHHHHhcCcccCCCccEEEEeCceeeeeEEEECc--c-eEEEecCCCCcceeEEEecCC------------
Q psy675 65 GRKLAHFDTIQAALDHGDELGQSAPLVFVHSGVYRGEFLVLDS--D-VIIIGAAPGNVAESVILERDT------------ 129 (1175)
Q Consensus 65 ~~~~~~~~tIq~Al~~a~~gd~~~~~I~v~~G~Y~e~~l~I~k--~-v~l~G~g~g~~~~~v~i~~~~------------ 129 (1175)
+...++|+|||+||++++.....+.+|+|+||+|+| .|.|++ + |+|+|++++. ++|....
T Consensus 281 ~dGsG~f~TIq~Ai~a~P~~~~~r~vI~Ik~GvY~E-~V~I~~~k~ni~l~G~g~~~----TiIt~~~~~~~~~g~~T~~ 355 (588)
T PLN02197 281 KDGSGQFKTISQAVMACPDKNPGRCIIHIKAGIYNE-QVTIPKKKNNIFMFGDGARK----TVISYNRSVKLSPGTTTSL 355 (588)
T ss_pred CCCCCCcCCHHHHHHhccccCCceEEEEEeCceEEE-EEEccCCCceEEEEEcCCCC----eEEEeccccccCCCCcccc
Confidence 557889999999999999876567789999999998 999964 3 9999998754 3554321
Q ss_pred CceEEEecCceeeEEeeEEEEeCCCCCccccccceeEEEECCCcceEEeeeEEEeCCCCCeEEEEEccCccceEeeeeEe
Q psy675 130 ESTVMFVEGAKNAYLGHVTLKFSPEAPSTVQHHKHYCLEVGEHATPTIDHCIIRSTSVVGAAVCVSGVCASPTLRHCDIS 209 (1175)
Q Consensus 130 ~~~v~~~~g~~~~~l~~lti~~~~~~~~~~~~~~~~~i~v~~~~~~~i~~c~i~~~~~~g~~v~v~g~~a~~~i~~c~i~ 209 (1175)
..++.+. +.++..++|||+++.... .+...++.+. .....+.+|.|.+.. .++++.. .+-.+++|.|+
T Consensus 356 SaT~~v~--~~~F~a~nitf~Ntag~~----~~QAVAlrv~-~D~~~fy~C~f~GyQ---DTLy~~~--~Rqyy~~C~I~ 423 (588)
T PLN02197 356 SGTVQVE--SEGFMAKWIGFKNTAGPM----GHQAVAIRVN-GDRAVIFNCRFDGYQ---DTLYVNN--GRQFYRNIVVS 423 (588)
T ss_pred eeEEEEE--CCcEEEEEeEEEeCCCCC----CCceEEEEec-CCcEEEEEeEEEecC---cceEecC--CCEEEEeeEEE
Confidence 2244444 688999999999875321 1112345554 367778888888753 4577642 46677777777
Q ss_pred cCcceeEEEeeceeEEEEeeEEEe
Q psy675 210 DCENVGLYVTDYAQGLYEDNEISR 233 (1175)
Q Consensus 210 ~~~~~GI~v~~~s~~~ie~c~i~~ 233 (1175)
+.- =++.+.+.+.|++|+|..
T Consensus 424 GtV---DFIFG~a~avfq~C~i~~ 444 (588)
T PLN02197 424 GTV---DFIFGKSATVIQNSLIVV 444 (588)
T ss_pred ecc---cccccceeeeeecCEEEE
Confidence 653 356666777777777753
No 43
>PLN02314 pectinesterase
Probab=99.15 E-value=1.2e-09 Score=131.67 Aligned_cols=150 Identities=17% Similarity=0.270 Sum_probs=111.1
Q ss_pred CCCCCCcchHHHHHhcCcccCCCccEEEEeCceeeeeEEEECcc---eEEEecCCCCcceeEEEecC----------CCc
Q psy675 65 GRKLAHFDTIQAALDHGDELGQSAPLVFVHSGVYRGEFLVLDSD---VIIIGAAPGNVAESVILERD----------TES 131 (1175)
Q Consensus 65 ~~~~~~~~tIq~Al~~a~~gd~~~~~I~v~~G~Y~e~~l~I~k~---v~l~G~g~g~~~~~v~i~~~----------~~~ 131 (1175)
+...++|+|||+||++++.+...+.+|+|+||+|+| .|.|+++ |+|+|++++.+ +|.+. ...
T Consensus 284 ~dGsg~f~TI~~Av~a~p~~~~~r~vI~ik~G~Y~E-~V~i~~~k~~i~l~G~g~~~t----iIt~~~~~~~g~~t~~sa 358 (586)
T PLN02314 284 KDGSGDVKTINEAVASIPKKSKSRFVIYVKEGTYVE-NVLLDKSKWNVMIYGDGKDKT----IISGSLNFVDGTPTFSTA 358 (586)
T ss_pred CCCCCCccCHHHHHhhccccCCceEEEEEcCceEEE-EEEecCCCceEEEEecCCCCc----EEEecCCcCCCCCccceE
Confidence 456789999999999999886667899999999998 9999653 99999987643 55431 113
Q ss_pred eEEEecCceeeEEeeEEEEeCCCCCccccccceeEEEECCCcceEEeeeEEEeCCCCCeEEEEEccCccceEeeeeEecC
Q psy675 132 TVMFVEGAKNAYLGHVTLKFSPEAPSTVQHHKHYCLEVGEHATPTIDHCIIRSTSVVGAAVCVSGVCASPTLRHCDISDC 211 (1175)
Q Consensus 132 ~v~~~~g~~~~~l~~lti~~~~~~~~~~~~~~~~~i~v~~~~~~~i~~c~i~~~~~~g~~v~v~g~~a~~~i~~c~i~~~ 211 (1175)
++.+. ++++..++|||++..... .++..++.+. +....+.+|.|.+.. .++++.. .+-.+++|.|++.
T Consensus 359 T~~v~--~~~F~a~~itf~Ntag~~----~~QAvAlrv~-~D~~~f~~c~~~G~Q---DTLy~~~--~rq~y~~C~I~Gt 426 (586)
T PLN02314 359 TFAAA--GKGFIAKDMGFINTAGAA----KHQAVAFRSG-SDMSVFYQCSFDAFQ---DTLYAHS--NRQFYRDCDITGT 426 (586)
T ss_pred EEEEE--cCCeEEEeeEEEECCCCC----CCceEEEEec-CCcEEEEeeEEEecc---chheeCC--CCEEEEeeEEEec
Confidence 34444 688999999999875321 1112345555 467889999999853 5677753 4788999999875
Q ss_pred cceeEEEeeceeEEEEeeEEEec
Q psy675 212 ENVGLYVTDYAQGLYEDNEISRN 234 (1175)
Q Consensus 212 ~~~GI~v~~~s~~~ie~c~i~~~ 234 (1175)
- =++.+.+.+.|++|+|...
T Consensus 427 v---DFIFG~a~avf~~c~i~~~ 446 (586)
T PLN02314 427 I---DFIFGNAAVVFQNCNIQPR 446 (586)
T ss_pred c---ceeccCceeeeeccEEEEe
Confidence 4 4677888899999998753
No 44
>PLN02416 probable pectinesterase/pectinesterase inhibitor
Probab=99.14 E-value=6.7e-10 Score=132.09 Aligned_cols=149 Identities=17% Similarity=0.309 Sum_probs=101.2
Q ss_pred CCCCCCcchHHHHHhcCcccCCCccEEEEeCceeeeeEEEECc--c-eEEEecCCCCcceeEEEecCC----------Cc
Q psy675 65 GRKLAHFDTIQAALDHGDELGQSAPLVFVHSGVYRGEFLVLDS--D-VIIIGAAPGNVAESVILERDT----------ES 131 (1175)
Q Consensus 65 ~~~~~~~~tIq~Al~~a~~gd~~~~~I~v~~G~Y~e~~l~I~k--~-v~l~G~g~g~~~~~v~i~~~~----------~~ 131 (1175)
....++|+|||+||++++.....+.+|+|+||+|+| .|.|++ + |+|+|++++. ++|.+.. ..
T Consensus 236 ~dGsG~f~TIq~Ai~a~p~~~~~r~vI~Ik~GvY~E-~V~i~~~k~~i~l~G~g~~~----TiIt~~~~~~~g~~T~~sa 310 (541)
T PLN02416 236 ADGTGNFSTITDAINFAPNNSNDRIIIYVREGVYEE-NVEIPIYKTNIVLIGDGSDV----TFITGNRSVVDGWTTFRSA 310 (541)
T ss_pred CCCCCCccCHHHHHHhhhhcCCceEEEEEeCceeEE-EEecCCCCccEEEEecCCCc----eEEeCCCccCCCCCccceE
Confidence 456789999999999998876567789999999998 899964 4 9999998754 3565421 13
Q ss_pred eEEEecCceeeEEeeEEEEeCCCCCccccccceeEEEECCCcceEEeeeEEEeCCCCCeEEEEEccCccceEeeeeEecC
Q psy675 132 TVMFVEGAKNAYLGHVTLKFSPEAPSTVQHHKHYCLEVGEHATPTIDHCIIRSTSVVGAAVCVSGVCASPTLRHCDISDC 211 (1175)
Q Consensus 132 ~v~~~~g~~~~~l~~lti~~~~~~~~~~~~~~~~~i~v~~~~~~~i~~c~i~~~~~~g~~v~v~g~~a~~~i~~c~i~~~ 211 (1175)
++.+. ++++..++|||++..... .++..++.+. +....+.+|.|.+.. .++++.. .+-.+++|.|++.
T Consensus 311 T~~v~--~~~F~a~nitf~Ntag~~----~~QAVAl~v~-~D~~~fy~c~~~G~Q---DTLy~~~--~Rqyy~~C~I~Gt 378 (541)
T PLN02416 311 TLAVS--GEGFLARDITIENTAGPE----KHQAVALRVN-ADLVALYRCTINGYQ---DTLYVHS--FRQFYRECDIYGT 378 (541)
T ss_pred EEEEE--CCCeEEEeeEEEECCCCC----CCceEEEEEc-CccEEEEcceEeccc---chhccCC--CceEEEeeEEeec
Confidence 45555 688999999999875321 1112345554 356777777777743 3465532 3566777777654
Q ss_pred cceeEEEeeceeEEEEeeEEEe
Q psy675 212 ENVGLYVTDYAQGLYEDNEISR 233 (1175)
Q Consensus 212 ~~~GI~v~~~s~~~ie~c~i~~ 233 (1175)
- =++.+.+.+.+++|+|..
T Consensus 379 V---DFIFG~a~avfq~c~i~~ 397 (541)
T PLN02416 379 I---DYIFGNAAVVFQACNIVS 397 (541)
T ss_pred c---ceeeccceEEEeccEEEE
Confidence 3 245566666666666654
No 45
>PLN03043 Probable pectinesterase/pectinesterase inhibitor; Provisional
Probab=99.13 E-value=2.1e-09 Score=128.00 Aligned_cols=150 Identities=16% Similarity=0.290 Sum_probs=109.8
Q ss_pred CCCCCCcchHHHHHhcCcccCC---CccEEEEeCceeeeeEEEECc--c-eEEEecCCCCcceeEEEecCC---------
Q psy675 65 GRKLAHFDTIQAALDHGDELGQ---SAPLVFVHSGVYRGEFLVLDS--D-VIIIGAAPGNVAESVILERDT--------- 129 (1175)
Q Consensus 65 ~~~~~~~~tIq~Al~~a~~gd~---~~~~I~v~~G~Y~e~~l~I~k--~-v~l~G~g~g~~~~~v~i~~~~--------- 129 (1175)
+...++|+|||+||++++.... .+.+|+|+||+|+| .|.|.+ + |+|+|++++. ++|.+..
T Consensus 229 ~dGsG~f~TI~~Av~a~p~~~~~~~~r~vI~vk~G~Y~E-~V~i~~~k~~i~l~G~g~~~----tiIt~~~~~~dg~~T~ 303 (538)
T PLN03043 229 PYGTDNFTTITDAIAAAPNNSKPEDGYFVIYAREGYYEE-YVVVPKNKKNIMLIGDGINK----TIITGNHSVVDGWTTF 303 (538)
T ss_pred CCCCCCCcCHHHHHHhccccCCCCcceEEEEEcCeeeEE-EEEeCCCCCcEEEEecCCCC----eEEEeCCccCCCCccc
Confidence 4467899999999999987632 25689999999998 999953 3 9999998754 3565321
Q ss_pred -CceEEEecCceeeEEeeEEEEeCCCCCccccccceeEEEECCCcceEEeeeEEEeCCCCCeEEEEEccCccceEeeeeE
Q psy675 130 -ESTVMFVEGAKNAYLGHVTLKFSPEAPSTVQHHKHYCLEVGEHATPTIDHCIIRSTSVVGAAVCVSGVCASPTLRHCDI 208 (1175)
Q Consensus 130 -~~~v~~~~g~~~~~l~~lti~~~~~~~~~~~~~~~~~i~v~~~~~~~i~~c~i~~~~~~g~~v~v~g~~a~~~i~~c~i 208 (1175)
..++.+. +.++..++|||++..... .+...++.+. .....+.+|.|.+-. .++++.. .+-.+++|.|
T Consensus 304 ~saT~~v~--~~~F~a~~it~~Ntag~~----~~QAvAlrv~-~D~~~f~~C~~~gyQ---DTLy~~~--~rq~y~~c~I 371 (538)
T PLN03043 304 NSSTFAVS--GERFVAVDVTFRNTAGPE----KHQAVALRNN-ADLSTFYRCSFEGYQ---DTLYVHS--LRQFYRECDI 371 (538)
T ss_pred cceEEEEE--CCCEEEEeeEEEECCCCC----CCceEEEEEc-CCcEEEEeeEEeccC---cccccCC--CcEEEEeeEE
Confidence 1344454 689999999999875321 1112345555 467889999999854 4677653 4788999999
Q ss_pred ecCcceeEEEeeceeEEEEeeEEEec
Q psy675 209 SDCENVGLYVTDYAQGLYEDNEISRN 234 (1175)
Q Consensus 209 ~~~~~~GI~v~~~s~~~ie~c~i~~~ 234 (1175)
++.- =++.+.+.+.|++|+|...
T Consensus 372 ~GtV---DFIFG~a~avfq~c~i~~r 394 (538)
T PLN03043 372 YGTV---DFIFGNAAAIFQNCNLYAR 394 (538)
T ss_pred eecc---ceEeecceeeeeccEEEEe
Confidence 8764 3677889999999999753
No 46
>PLN02313 Pectinesterase/pectinesterase inhibitor
Probab=99.13 E-value=1.4e-09 Score=130.86 Aligned_cols=149 Identities=18% Similarity=0.329 Sum_probs=106.0
Q ss_pred CCCCCCcchHHHHHhcCcccCCCccEEEEeCceeeeeEEEECcc---eEEEecCCCCcceeEEEecCC----------Cc
Q psy675 65 GRKLAHFDTIQAALDHGDELGQSAPLVFVHSGVYRGEFLVLDSD---VIIIGAAPGNVAESVILERDT----------ES 131 (1175)
Q Consensus 65 ~~~~~~~~tIq~Al~~a~~gd~~~~~I~v~~G~Y~e~~l~I~k~---v~l~G~g~g~~~~~v~i~~~~----------~~ 131 (1175)
....++|+|||+||+++++....+.+|+|+||+|+| .|.|+|+ |+|+|++++. ++|.+.. ..
T Consensus 281 ~dGsG~f~TI~~Av~a~p~~~~~r~vI~ik~GvY~E-~V~i~~~k~ni~l~Gdg~~~----TiIt~~~~~~~g~~t~~sa 355 (587)
T PLN02313 281 ADGSGDFTTVAAAVAAAPEKSNKRFVIHIKAGVYRE-NVEVTKKKKNIMFLGDGRGK----TIITGSRNVVDGSTTFHSA 355 (587)
T ss_pred CCCCCCCccHHHHHHhccccCCceEEEEEeCceeEE-EEEeCCCCCeEEEEecCCCc----cEEEeCCcccCCCCceeeE
Confidence 456789999999999999876667899999999998 9999753 9999998754 3554321 13
Q ss_pred eEEEecCceeeEEeeEEEEeCCCCCccccccceeEEEECCCcceEEeeeEEEeCCCCCeEEEEEccCccceEeeeeEecC
Q psy675 132 TVMFVEGAKNAYLGHVTLKFSPEAPSTVQHHKHYCLEVGEHATPTIDHCIIRSTSVVGAAVCVSGVCASPTLRHCDISDC 211 (1175)
Q Consensus 132 ~v~~~~g~~~~~l~~lti~~~~~~~~~~~~~~~~~i~v~~~~~~~i~~c~i~~~~~~g~~v~v~g~~a~~~i~~c~i~~~ 211 (1175)
++.+. ++++..++|||++..... .++..++.+. .....+.+|.|.+.. .++++.. .+-.+++|.|.+.
T Consensus 356 t~~v~--~~~F~a~~itf~Ntag~~----~~QAvAlrv~-~D~~~fy~C~~~g~Q---DTLy~~~--~rq~y~~c~I~Gt 423 (587)
T PLN02313 356 TVAAV--GERFLARDITFQNTAGPS----KHQAVALRVG-SDFSAFYQCDMFAYQ---DTLYVHS--NRQFFVKCHITGT 423 (587)
T ss_pred EEEEE--CCCeEEEeeEEEeCCCCC----CCceEEEEec-CCcEEEEeeeEeccc---chhccCC--CcEEEEeeEEeec
Confidence 34444 678999999999875421 1112345555 467778888888753 4577643 4567888888765
Q ss_pred cceeEEEeeceeEEEEeeEEEe
Q psy675 212 ENVGLYVTDYAQGLYEDNEISR 233 (1175)
Q Consensus 212 ~~~GI~v~~~s~~~ie~c~i~~ 233 (1175)
- =++.+.+.+.+++|+|..
T Consensus 424 v---DFIFG~a~avfq~c~i~~ 442 (587)
T PLN02313 424 V---DFIFGNAAAVLQDCDINA 442 (587)
T ss_pred c---ceeccceeEEEEccEEEE
Confidence 4 356677777778887764
No 47
>PF12708 Pectate_lyase_3: Pectate lyase superfamily protein; PDB: 3EQN_A 3EQO_A 2PYG_A 2PYH_A 3SUC_A 3GQ7_A 3GQ9_A 3GQA_A 3GQ8_A 2VBE_A ....
Probab=98.67 E-value=1.5e-06 Score=94.44 Aligned_cols=49 Identities=27% Similarity=0.344 Sum_probs=35.2
Q ss_pred CCCCcchHHHHH-hcCcccCCCccEEEEeCceeee-eEEEECcceEEEecCCCC
Q psy675 67 KLAHFDTIQAAL-DHGDELGQSAPLVFVHSGVYRG-EFLVLDSDVIIIGAAPGN 118 (1175)
Q Consensus 67 ~~~~~~tIq~Al-~~a~~gd~~~~~I~v~~G~Y~e-~~l~I~k~v~l~G~g~g~ 118 (1175)
..++-+.||+|| +++.++ +++|++|||+|+- .+|.+.++|+|+|+++..
T Consensus 14 ~tDdt~Aiq~Ai~~~~~~~---g~~v~~P~G~Y~i~~~l~~~s~v~l~G~g~~~ 64 (225)
T PF12708_consen 14 VTDDTAAIQAAIDAAAAAG---GGVVYFPPGTYRISGTLIIPSNVTLRGAGGNS 64 (225)
T ss_dssp EEE-HHHHHHHHHHHCSTT---SEEEEE-SEEEEESS-EEE-TTEEEEESSTTT
T ss_pred ChhHHHHHHHhhhhcccCC---CeEEEEcCcEEEEeCCeEcCCCeEEEccCCCe
Confidence 456778999999 333333 3699999999998 469999999999988643
No 48
>COG4677 PemB Pectin methylesterase [Carbohydrate transport and metabolism]
Probab=98.56 E-value=1.1e-06 Score=93.65 Aligned_cols=51 Identities=25% Similarity=0.361 Sum_probs=42.4
Q ss_pred CCCCCCcchHHHHHhcCcccCC-CccEEEEeCceeeeeEEEECcc---eEEEecCC
Q psy675 65 GRKLAHFDTIQAALDHGDELGQ-SAPLVFVHSGVYRGEFLVLDSD---VIIIGAAP 116 (1175)
Q Consensus 65 ~~~~~~~~tIq~Al~~a~~gd~-~~~~I~v~~G~Y~e~~l~I~k~---v~l~G~g~ 116 (1175)
.....+|+|||+|||+|.+... .+-.|.|+||.|.| .|.|.++ |||.|++.
T Consensus 88 ~a~G~~f~TIQaAvdaA~~~~~~kr~yI~vk~GvY~e-~v~Vp~~~~~ITLyGed~ 142 (405)
T COG4677 88 GAQGVTFTTIQAAVDAAIIKRTNKRQYIAVKAGVYQE-TVYVPAAPGGITLYGEDE 142 (405)
T ss_pred CCCccchHHHHHHHhhhcccCCCceEEEEEccceece-eEEecCCCCceeEEecCC
Confidence 4455699999999999988752 45689999999998 8999864 99999883
No 49
>PF01696 Adeno_E1B_55K: Adenovirus EB1 55K protein / large t-antigen; InterPro: IPR002612 This family consists of adenovirus E1B 55 kDa protein or large t-antigen. E1B 55 kDa binds p53 the tumor suppressor protein converting it from a transcriptional activator which responds to damaged DNA in to an unregulated repressor of genes with a p53 binding site []. This protects the virus against p53 induced host antiviral responses and prevents apoptosis as induced by the adenovirus E1A protein []. The E1B region of adenovirus encodes two proteins E1B 55 kDa, the large t-antigen as found in this family and E1B 19 kDa IPR002924 from INTERPRO, the small t-antigen. Both of these proteins inhibit E1A induced apoptosis.
Probab=98.47 E-value=0.00012 Score=82.32 Aligned_cols=163 Identities=13% Similarity=0.152 Sum_probs=117.6
Q ss_pred CCCCCcchHHHHHhcCcccCCCccEEEEeCc-eeee-eEEEECcceEEEecCCCCcceeEEEecCCCceEEEec------
Q psy675 66 RKLAHFDTIQAALDHGDELGQSAPLVFVHSG-VYRG-EFLVLDSDVIIIGAAPGNVAESVILERDTESTVMFVE------ 137 (1175)
Q Consensus 66 ~~~~~~~tIq~Al~~a~~gd~~~~~I~v~~G-~Y~e-~~l~I~k~v~l~G~g~g~~~~~v~i~~~~~~~v~~~~------ 137 (1175)
-..+|.+..++||+.- +.|.|.|| +|+. .+|.|++...|+|.|. .|++..+.+.++.+..
T Consensus 49 ~~~~P~eDle~~I~~h-------aKVaL~Pg~~Y~i~~~V~I~~~cYIiGnGA-----~V~v~~~~~~~f~v~~~~~~P~ 116 (386)
T PF01696_consen 49 YWMEPGEDLEEAIRQH-------AKVALRPGAVYVIRKPVNIRSCCYIIGNGA-----TVRVNGPDRVAFRVCMQSMGPG 116 (386)
T ss_pred EEcCCCcCHHHHHHhc-------CEEEeCCCCEEEEeeeEEecceEEEECCCE-----EEEEeCCCCceEEEEcCCCCCe
Confidence 4556667899998853 28999998 6886 6999999999999772 4677777666565431
Q ss_pred --CceeeEEeeEEEEeCCCCCccccccceeEEEECCCcceEEeeeEEEeCCCCCeEEEEEccCccceEeeeeEecCccee
Q psy675 138 --GAKNAYLGHVTLKFSPEAPSTVQHHKHYCLEVGEHATPTIDHCIIRSTSVVGAAVCVSGVCASPTLRHCDISDCENVG 215 (1175)
Q Consensus 138 --g~~~~~l~~lti~~~~~~~~~~~~~~~~~i~v~~~~~~~i~~c~i~~~~~~g~~v~v~g~~a~~~i~~c~i~~~~~~G 215 (1175)
|-.++++.++.+...+. +.++++......+|.+|.|.+. .|.+|... +..++|+|+|.++. .|
T Consensus 117 V~gM~~VtF~ni~F~~~~~---------~~g~~f~~~t~~~~hgC~F~gf--~g~cl~~~---~~~~VrGC~F~~C~-~g 181 (386)
T PF01696_consen 117 VVGMEGVTFVNIRFEGRDT---------FSGVVFHANTNTLFHGCSFFGF--HGTCLESW---AGGEVRGCTFYGCW-KG 181 (386)
T ss_pred EeeeeeeEEEEEEEecCCc---------cceeEEEecceEEEEeeEEecC--cceeEEEc---CCcEEeeeEEEEEE-EE
Confidence 12345555555544331 3456666678899999999987 35666654 46899999999886 78
Q ss_pred EEEeeceeEEEEeeEEEecCceeEEEeccCcceEEecEEEecc
Q psy675 216 LYVTDYAQGLYEDNEISRNALAGIWVKNYANPIMRRNHIHHGR 258 (1175)
Q Consensus 216 I~v~~~s~~~ie~c~i~~~~~~gI~v~~~a~~~i~~~~I~~~~ 258 (1175)
|.-.+.+...+..|.|..... || ...+...+++|.+.++.
T Consensus 182 i~~~~~~~lsVk~C~FekC~i-gi--~s~G~~~i~hn~~~ec~ 221 (386)
T PF01696_consen 182 IVSRGKSKLSVKKCVFEKCVI-GI--VSEGPARIRHNCASECG 221 (386)
T ss_pred eecCCcceEEeeheeeeheEE-EE--EecCCeEEecceecccc
Confidence 877777888889998887653 55 33667788888888765
No 50
>PLN02188 polygalacturonase/glycoside hydrolase family protein
Probab=98.14 E-value=0.0019 Score=75.48 Aligned_cols=208 Identities=11% Similarity=0.062 Sum_probs=121.1
Q ss_pred CCCCcchHHHHHh-cCcccCCCccEEEEeCceeeeeEEEECc------ce--EEEecCCCCcceeEEEecCCCceEEEec
Q psy675 67 KLAHFDTIQAALD-HGDELGQSAPLVFVHSGVYRGEFLVLDS------DV--IIIGAAPGNVAESVILERDTESTVMFVE 137 (1175)
Q Consensus 67 ~~~~~~tIq~Al~-~a~~gd~~~~~I~v~~G~Y~e~~l~I~k------~v--~l~G~g~g~~~~~v~i~~~~~~~v~~~~ 137 (1175)
...+-+.||+|++ ++..+ .+++|+||||+|.-.+|.++. .| +|.+.. ... ..+.........
T Consensus 49 ~tddT~Ai~~Ai~~aC~~~--Ggg~V~vP~G~yl~g~i~lkgpc~~~s~v~l~L~~s~--d~~-----~y~~~~~~i~~~ 119 (404)
T PLN02188 49 HTDDSKAFMAAWKAACAST--GAVTLLIPPGTYYIGPVQFHGPCTNVSSLTFTLKAAT--DLS-----RYGSGNDWIEFG 119 (404)
T ss_pred CeeCHHHHHHHHHHHhccC--CCeEEEECCCeEEEEeEEeCCCcCcceeEEEEEEcCC--CHH-----HCCCccceEEEe
Confidence 4456678999997 44332 236999999999976788752 23 455422 110 000011111101
Q ss_pred CceeeEEeeEEEEeC------CCCC-cc-------ccccceeEEEECCCcceEEeeeEEEeCCCCCeEEEEEccCccceE
Q psy675 138 GAKNAYLGHVTLKFS------PEAP-ST-------VQHHKHYCLEVGEHATPTIDHCIIRSTSVVGAAVCVSGVCASPTL 203 (1175)
Q Consensus 138 g~~~~~l~~lti~~~------~~~~-~~-------~~~~~~~~i~v~~~~~~~i~~c~i~~~~~~g~~v~v~g~~a~~~i 203 (1175)
.+++++|.+. +..- +. ....+...+.+....++.|++.+++++.. -.+++.. ..++++
T Consensus 120 -----~~~ni~I~G~G~IDG~G~~ww~~~~~~~~~~~~~rP~~i~f~~~~nv~i~gitl~nSp~--w~i~~~~-~~~v~i 191 (404)
T PLN02188 120 -----WVNGLTLTGGGTFDGQGAAAWPFNKCPIRKDCKLLPTSVKFVNMNNTVVRGITSVNSKF--FHIALVE-CRNFKG 191 (404)
T ss_pred -----ceeeEEEEeeEEEeCCCcccccccccccCCCCCcCceEEEEEeeeeEEEeCeEEEcCCC--eEEEEEc-cccEEE
Confidence 1334444433 2210 00 00011234556566788999999998743 4566664 468999
Q ss_pred eeeeEecC----cceeEEEeeceeEEEEeeEEEecCceeEEEecc-CcceEEecEEEecccceEEEecC-CC-cccccCC
Q psy675 204 RHCDISDC----ENVGLYVTDYAQGLYEDNEISRNALAGIWVKNY-ANPIMRRNHIHHGRDVGIFTFDN-GH-IFPISNS 276 (1175)
Q Consensus 204 ~~c~i~~~----~~~GI~v~~~s~~~ie~c~i~~~~~~gI~v~~~-a~~~i~~~~I~~~~~~GI~~~~~-g~-g~~~~~s 276 (1175)
++-+|... -..||-+.......+++|.|.. ++.+|.++.. .+++++++.... ++||.+ .+ |. .....-.
T Consensus 192 ~~v~I~~~~~spNtDGidi~~s~nV~I~n~~I~~-GDDcIaiksg~~nI~I~n~~c~~--ghGisi-GSlG~~~~~~~V~ 267 (404)
T PLN02188 192 SGLKISAPSDSPNTDGIHIERSSGVYISDSRIGT-GDDCISIGQGNSQVTITRIRCGP--GHGISV-GSLGRYPNEGDVT 267 (404)
T ss_pred EEEEEeCCCCCCCCCcEeeeCcccEEEEeeEEeC-CCcEEEEccCCccEEEEEEEEcC--CCcEEe-CCCCCCCcCCcEE
Confidence 99999863 2479999998999999999985 5569999754 478888887754 367764 11 00 0001123
Q ss_pred cceEecceeeecccccEEEE
Q psy675 277 NPTIRRNEIYNGHQGGVYIF 296 (1175)
Q Consensus 277 ~~~i~~n~I~~~~~~GI~v~ 296 (1175)
++++++|++.+. ..|+.+.
T Consensus 268 nV~v~n~~~~~t-~~GiriK 286 (404)
T PLN02188 268 GLVVRDCTFTGT-TNGIRIK 286 (404)
T ss_pred EEEEEeeEEECC-CcEEEEE
Confidence 455666665543 3555554
No 51
>PLN02793 Probable polygalacturonase
Probab=98.12 E-value=0.0089 Score=70.76 Aligned_cols=228 Identities=11% Similarity=0.071 Sum_probs=124.5
Q ss_pred CCCCcchHHHHHh-cCcccCCCccEEEEeCc-eeeeeEEEEC----cceEEEecCCCCcceeEEEecC--------CCce
Q psy675 67 KLAHFDTIQAALD-HGDELGQSAPLVFVHSG-VYRGEFLVLD----SDVIIIGAAPGNVAESVILERD--------TEST 132 (1175)
Q Consensus 67 ~~~~~~tIq~Al~-~a~~gd~~~~~I~v~~G-~Y~e~~l~I~----k~v~l~G~g~g~~~~~v~i~~~--------~~~~ 132 (1175)
...+-+.||+|++ ++... .+++|+||+| +|.-.+|.+. ..|+|.=++ + ++.+. ....
T Consensus 65 ~tddT~Aiq~Ai~~aC~~~--ggg~v~vP~G~~fl~~~i~l~gpcks~vtL~l~g--~-----l~~~~d~~~w~~~~~~~ 135 (443)
T PLN02793 65 VTDDTQAFKEAWKMACSSK--VKTRIVIPAGYTFLVRPIDLGGPCKAKLTLQISG--T-----IIAPKDPDVWKGLNPRK 135 (443)
T ss_pred CCccHHHHHHHHHHHhccC--CCCEEEECCCceEEEEEEEECCccCCCeEEEEEE--E-----EEccCChHHccCCCCce
Confidence 3456678999998 44321 1259999999 4876689884 446664222 1 11111 1112
Q ss_pred EEEecCceeeEEee-EEEEeCCCCCccc--------cc-cceeEEEECCCcceEEeeeEEEeCCCCCeEEEEEccCccce
Q psy675 133 VMFVEGAKNAYLGH-VTLKFSPEAPSTV--------QH-HKHYCLEVGEHATPTIDHCIIRSTSVVGAAVCVSGVCASPT 202 (1175)
Q Consensus 133 v~~~~g~~~~~l~~-lti~~~~~~~~~~--------~~-~~~~~i~v~~~~~~~i~~c~i~~~~~~g~~v~v~g~~a~~~ 202 (1175)
+....+..++.+.| =+|.+.+..--.. +. .+...+.+....+++|++.+++++.. -.+.+.. ...++
T Consensus 136 ~i~~~~~~ni~ItG~G~IDG~G~~ww~~~~~~~~~~~~~~rP~~i~f~~~~nv~v~gitl~nSp~--~~i~~~~-~~nv~ 212 (443)
T PLN02793 136 WLYFHGVNHLTVEGGGTVNGMGHEWWAQSCKINHTNPCRHAPTAITFHKCKDLRVENLNVIDSQQ--MHIAFTN-CRRVT 212 (443)
T ss_pred EEEEecCceEEEEeceEEECCCcccccccccccCCCCccCCceEEEEEeeccEEEECeEEEcCCC--eEEEEEc-cCcEE
Confidence 22222333333332 1233222110000 00 01124566666788888888888743 3466654 45788
Q ss_pred EeeeeEecC----cceeEEEeeceeEEEEeeEEEecCceeEEEe-ccCcceEEecEEEecccceEEEecCCCc-ccccCC
Q psy675 203 LRHCDISDC----ENVGLYVTDYAQGLYEDNEISRNALAGIWVK-NYANPIMRRNHIHHGRDVGIFTFDNGHI-FPISNS 276 (1175)
Q Consensus 203 i~~c~i~~~----~~~GI~v~~~s~~~ie~c~i~~~~~~gI~v~-~~a~~~i~~~~I~~~~~~GI~~~~~g~g-~~~~~s 276 (1175)
+++-+|... ...||-+.......|++|.|.. ++.+|.++ ...+++|++|+.... +||.+=.-|.. ....-.
T Consensus 213 i~~l~I~~p~~spNTDGIdi~~s~nV~I~n~~I~~-gDDcIaik~~s~nI~I~n~~c~~G--hGisIGSlg~~~~~~~V~ 289 (443)
T PLN02793 213 ISGLKVIAPATSPNTDGIHISASRGVVIKDSIVRT-GDDCISIVGNSSRIKIRNIACGPG--HGISIGSLGKSNSWSEVR 289 (443)
T ss_pred EEEEEEECCCCCCCCCcEeeeccceEEEEeCEEeC-CCCeEEecCCcCCEEEEEeEEeCC--ccEEEecccCcCCCCcEE
Confidence 888888753 2478888888888899998884 55688886 456778888877543 56654100000 001123
Q ss_pred cceEecceeeecccccEEEEec--CceEEEeeEEEe
Q psy675 277 NPTIRRNEIYNGHQGGVYIFGE--GRGLIEHNNIYG 310 (1175)
Q Consensus 277 ~~~i~~n~I~~~~~~GI~v~~~--~~~~i~~n~I~~ 310 (1175)
++++++|.+.+. ..|+.++.. ..+.+++-++++
T Consensus 290 nV~v~n~~~~~t-~~GirIKt~~g~~G~v~nItf~n 324 (443)
T PLN02793 290 DITVDGAFLSNT-DNGVRIKTWQGGSGNASKITFQN 324 (443)
T ss_pred EEEEEccEEeCC-CceEEEEEeCCCCEEEEEEEEEe
Confidence 456666666543 356665532 223444444443
No 52
>PLN02218 polygalacturonase ADPG
Probab=98.11 E-value=0.0061 Score=71.80 Aligned_cols=180 Identities=12% Similarity=0.082 Sum_probs=110.5
Q ss_pred CCCcchHHHHHh-cCcccCCCccEEEEeCc-eeeeeEEEECc----ceEEEecCCCCcceeEEEecC-------CC-ceE
Q psy675 68 LAHFDTIQAALD-HGDELGQSAPLVFVHSG-VYRGEFLVLDS----DVIIIGAAPGNVAESVILERD-------TE-STV 133 (1175)
Q Consensus 68 ~~~~~tIq~Al~-~a~~gd~~~~~I~v~~G-~Y~e~~l~I~k----~v~l~G~g~g~~~~~v~i~~~-------~~-~~v 133 (1175)
..+-+.||+|++ ++... ..++|.|||| +|.-.+|.+.. .++|.=.+ +|..+ .. .-+
T Consensus 81 tddT~Af~~Ai~~aCs~~--Ggg~v~vP~G~tyl~~~i~l~gp~ks~~~l~l~g--------~L~~s~d~~~y~~~~~wi 150 (431)
T PLN02218 81 TDDTQAFVNAWKKACSSN--GAVNLLVPKGNTYLLKSIQLTGPCKSIRTVQIFG--------TLSASQKRSDYKDISKWI 150 (431)
T ss_pred cccHHHHHHHHHHhhhcC--CCcEEEECCCCeEEEeeeEecCccCCceEEEEEE--------EEEeCCChhhccccccCE
Confidence 346678999995 55432 1368999999 69866777753 23332111 11111 11 113
Q ss_pred EEecCceeeEEee---EEEEeCCCCC--------cccc-ccceeEEEECCCcceEEeeeEEEeCCCCCeEEEEEccCccc
Q psy675 134 MFVEGAKNAYLGH---VTLKFSPEAP--------STVQ-HHKHYCLEVGEHATPTIDHCIIRSTSVVGAAVCVSGVCASP 201 (1175)
Q Consensus 134 ~~~~g~~~~~l~~---lti~~~~~~~--------~~~~-~~~~~~i~v~~~~~~~i~~c~i~~~~~~g~~v~v~g~~a~~ 201 (1175)
.+ .+..++.+.| =+|.+.+..- ...+ ..+...+.+....+++|++.+++++.. -.+.+.. ..++
T Consensus 151 ~~-~~~~ni~I~G~~~GtIDG~G~~WW~~~~~~~~~~~~~~rP~~i~f~~~~nv~I~gitl~nSp~--w~i~~~~-~~nV 226 (431)
T PLN02218 151 MF-DGVNNLSVDGGSTGVVDGNGETWWQNSCKRNKAKPCTKAPTALTFYNSKSLIVKNLRVRNAQQ--IQISIEK-CSNV 226 (431)
T ss_pred EE-ecCcEEEEECCCCcEEeCCchhhhhcccccCCcCccCcCCEEEEEEccccEEEeCeEEEcCCC--EEEEEEc-eeeE
Confidence 33 2334555544 4444444210 0000 011235666677889999999988743 4566664 4689
Q ss_pred eEeeeeEecC----cceeEEEeeceeEEEEeeEEEecCceeEEEeccC-cceEEecEEEecccceEEE
Q psy675 202 TLRHCDISDC----ENVGLYVTDYAQGLYEDNEISRNALAGIWVKNYA-NPIMRRNHIHHGRDVGIFT 264 (1175)
Q Consensus 202 ~i~~c~i~~~----~~~GI~v~~~s~~~ie~c~i~~~~~~gI~v~~~a-~~~i~~~~I~~~~~~GI~~ 264 (1175)
++++-+|... -..||-+.......|++|.|.. ++.+|.++..+ ++++++|+... ++||.+
T Consensus 227 ~i~~v~I~a~~~spNTDGIdi~ss~nV~I~n~~I~t-GDDcIaIksgs~nI~I~n~~c~~--GHGisI 291 (431)
T PLN02218 227 QVSNVVVTAPADSPNTDGIHITNTQNIRVSNSIIGT-GDDCISIESGSQNVQINDITCGP--GHGISI 291 (431)
T ss_pred EEEEEEEeCCCCCCCCCcEeecccceEEEEccEEec-CCceEEecCCCceEEEEeEEEEC--CCCEEE
Confidence 9999998753 3578999888889999999984 56788888655 67888888854 356654
No 53
>PLN03003 Probable polygalacturonase At3g15720
Probab=98.05 E-value=0.0035 Score=73.56 Aligned_cols=177 Identities=12% Similarity=0.083 Sum_probs=106.0
Q ss_pred CCCCcchHHHHHhcC-c-ccCCCccEEEEeCce-eeeeEEEECcc-----eEEEecCCCCcceeEEEecC------CCce
Q psy675 67 KLAHFDTIQAALDHG-D-ELGQSAPLVFVHSGV-YRGEFLVLDSD-----VIIIGAAPGNVAESVILERD------TEST 132 (1175)
Q Consensus 67 ~~~~~~tIq~Al~~a-~-~gd~~~~~I~v~~G~-Y~e~~l~I~k~-----v~l~G~g~g~~~~~v~i~~~------~~~~ 132 (1175)
..++-+.||+|+++| . ++ .++|+||+|. |...+|.+..| +++.= .|+ ++.+. ....
T Consensus 36 ~tDdT~Af~~Aw~aaC~~~g---gg~v~VP~G~~yl~~pl~l~gpck~~~~~~~i--~G~-----i~ap~~~~w~~~~~~ 105 (456)
T PLN03003 36 VTDDSQAFLKAWEAVCSGTG---DGQFVVPAGMTFMLQPLKFQGSCKSTPVFVQM--LGK-----LVAPSKGNWKGDKDQ 105 (456)
T ss_pred CcccHHHHHHHHHHhhhccC---CCEEEECCCceEEeeeeEeCCCccCcceeecc--Cce-----EecCccccccCCCcc
Confidence 446668899999984 2 23 2699999995 65457777543 22211 121 11110 0111
Q ss_pred EEEecCceeeEEeeEEEEeCCCCCcccc------ccceeEEEECCCcceEEeeeEEEeCCCCCeEEEEEccCccceEeee
Q psy675 133 VMFVEGAKNAYLGHVTLKFSPEAPSTVQ------HHKHYCLEVGEHATPTIDHCIIRSTSVVGAAVCVSGVCASPTLRHC 206 (1175)
Q Consensus 133 v~~~~g~~~~~l~~lti~~~~~~~~~~~------~~~~~~i~v~~~~~~~i~~c~i~~~~~~g~~v~v~g~~a~~~i~~c 206 (1175)
+....+ +++++|.+.+...-..+ ..+...+.+....+++|++.++.++.. -.+.+.+ ...+++++-
T Consensus 106 wI~f~~-----~~~i~I~G~GtIDGqG~~wW~~~~~rP~~l~f~~~~nv~I~gitl~NSp~--w~i~i~~-c~nV~i~~l 177 (456)
T PLN03003 106 WILFTD-----IEGLVIEGDGEINGQGSSWWEHKGSRPTALKFRSCNNLRLSGLTHLDSPM--AHIHISE-CNYVTISSL 177 (456)
T ss_pred eEEEEc-----ccceEEeccceEeCCchhhhhcccCCceEEEEEecCCcEEeCeEEecCCc--EEEEEec-cccEEEEEE
Confidence 211112 33455554432110000 001224566666788888888888743 4566664 467999999
Q ss_pred eEecC----cceeEEEeeceeEEEEeeEEEecCceeEEEeccC-cceEEecEEEecccceEEE
Q psy675 207 DISDC----ENVGLYVTDYAQGLYEDNEISRNALAGIWVKNYA-NPIMRRNHIHHGRDVGIFT 264 (1175)
Q Consensus 207 ~i~~~----~~~GI~v~~~s~~~ie~c~i~~~~~~gI~v~~~a-~~~i~~~~I~~~~~~GI~~ 264 (1175)
+|... -..||-+.......+++|.|.. ++.+|.++.++ ++.|++|+... ++||.+
T Consensus 178 ~I~ap~~spNTDGIDi~~S~nV~I~n~~I~t-GDDCIaiksgs~NI~I~n~~c~~--GHGISI 237 (456)
T PLN03003 178 RINAPESSPNTDGIDVGASSNVVIQDCIIAT-GDDCIAINSGTSNIHISGIDCGP--GHGISI 237 (456)
T ss_pred EEeCCCCCCCCCcEeecCcceEEEEecEEec-CCCeEEeCCCCccEEEEeeEEEC--CCCeEE
Confidence 88863 2478988888889999998884 56788888664 77888888764 356654
No 54
>PLN02155 polygalacturonase
Probab=97.96 E-value=0.014 Score=68.06 Aligned_cols=183 Identities=10% Similarity=0.076 Sum_probs=107.8
Q ss_pred CCCCcchHHHHHh-cCcccCCCccEEEEeCceeeeeEEEEC----cceEEEecCCCCcceeEEEecCCC------ceEEE
Q psy675 67 KLAHFDTIQAALD-HGDELGQSAPLVFVHSGVYRGEFLVLD----SDVIIIGAAPGNVAESVILERDTE------STVMF 135 (1175)
Q Consensus 67 ~~~~~~tIq~Al~-~a~~gd~~~~~I~v~~G~Y~e~~l~I~----k~v~l~G~g~g~~~~~v~i~~~~~------~~v~~ 135 (1175)
...+-+.||+|++ ++... .+++|+||+|+|.-.+|.+. ..|+|.=+| . ++.+.+- ..+..
T Consensus 40 ~td~t~Ai~~Ai~~aC~~~--gGg~v~vP~G~yl~g~i~l~gpcksnv~l~l~G--~-----l~~~~d~~~~~~~~~wi~ 110 (394)
T PLN02155 40 VTDSTAAFLKAWQGACGSA--SSATVVVPTGTFLLKVITFGGPCKSKITFQVAG--T-----VVAPEDYRTFGNSGYWIL 110 (394)
T ss_pred ccccHHHHHHHHHHHcccC--CCeEEEECCCcEEEEEEEEcccCCCCceEEEee--E-----EECccccccccccceeEE
Confidence 4456678999995 55431 13699999999997788884 345554222 1 1111110 11122
Q ss_pred ecCceeeEEeeEEEEeCCCCC----cc-cccc-ceeEEEECCCcceEEeeeEEEeCCCCCeEEEEEccCccceEeeeeEe
Q psy675 136 VEGAKNAYLGHVTLKFSPEAP----ST-VQHH-KHYCLEVGEHATPTIDHCIIRSTSVVGAAVCVSGVCASPTLRHCDIS 209 (1175)
Q Consensus 136 ~~g~~~~~l~~lti~~~~~~~----~~-~~~~-~~~~i~v~~~~~~~i~~c~i~~~~~~g~~v~v~g~~a~~~i~~c~i~ 209 (1175)
..+..++.|.+=+|.+.+..- .. .... ....+.+....+++|++.+++++.. -.+.+.+ ...+++++.+|.
T Consensus 111 ~~~~~~i~i~GG~iDGqG~~ww~~~~~~~~~~~~p~~i~~~~~~nv~i~gitl~nSp~--w~i~~~~-~~nv~i~~v~I~ 187 (394)
T PLN02155 111 FNKVNRFSLVGGTFDARANGFWSCRKSGQNCPPGVRSISFNSAKDVIISGVKSMNSQV--SHMTLNG-CTNVVVRNVKLV 187 (394)
T ss_pred EECcCCCEEEccEEecCceeEEEcccCCCCCCCcccceeEEEeeeEEEECeEEEcCCC--eEEEEEC-eeeEEEEEEEEE
Confidence 223455555555555544210 00 0000 0123555555677888888877632 3455554 357888888887
Q ss_pred cCc----ceeEEEeeceeEEEEeeEEEecCceeEEEecc-CcceEEecEEEecccceEEE
Q psy675 210 DCE----NVGLYVTDYAQGLYEDNEISRNALAGIWVKNY-ANPIMRRNHIHHGRDVGIFT 264 (1175)
Q Consensus 210 ~~~----~~GI~v~~~s~~~ie~c~i~~~~~~gI~v~~~-a~~~i~~~~I~~~~~~GI~~ 264 (1175)
... ..||-+......++++|.|.. ++.+|.++.. .++.|++|.... ++||.+
T Consensus 188 ~p~~~~NtDGidi~~s~nV~I~~~~I~~-gDDcIaik~gs~nI~I~n~~c~~--GhGisI 244 (394)
T PLN02155 188 APGNSPNTDGFHVQFSTGVTFTGSTVQT-GDDCVAIGPGTRNFLITKLACGP--GHGVSI 244 (394)
T ss_pred CCCCCCCCCccccccceeEEEEeeEEec-CCceEEcCCCCceEEEEEEEEEC--CceEEe
Confidence 632 368888877888899998885 4568888764 477888877764 356654
No 55
>PLN03010 polygalacturonase
Probab=97.92 E-value=0.031 Score=65.30 Aligned_cols=179 Identities=10% Similarity=0.040 Sum_probs=109.0
Q ss_pred CCCCcchHHHHHhcCcccCCCccEEEEeCc-eeeeeEEEECc-----ceEEEecCCCCcceeEEEecCC--------Cce
Q psy675 67 KLAHFDTIQAALDHGDELGQSAPLVFVHSG-VYRGEFLVLDS-----DVIIIGAAPGNVAESVILERDT--------EST 132 (1175)
Q Consensus 67 ~~~~~~tIq~Al~~a~~gd~~~~~I~v~~G-~Y~e~~l~I~k-----~v~l~G~g~g~~~~~v~i~~~~--------~~~ 132 (1175)
...+-+.||+|+++|-.+....++|+|||| +|.-.+|.++. .|+|.=++ . ++.+.+ ...
T Consensus 59 ~tddt~A~~~Ai~~ac~~~g~~g~v~vP~G~~yl~~~i~l~~pc~~~~v~l~l~G--~-----l~~~~d~~~w~~~~~~~ 131 (409)
T PLN03010 59 QTDDSNAFLQAWNATCGGEGNINTLLIPSGKTYLLQPIEFKGPCKSTSIKVQLDG--I-----IVAPSNIVAWSNPKSQM 131 (409)
T ss_pred CcccHHHHHHHHHHHccCCCCceEEEECCCCeEEEEeEEecCCCCCCcEEEEEcc--E-----EEccCChhhccCCCCcc
Confidence 345667899999875432111259999999 79866888874 35554222 1 111111 111
Q ss_pred EEEecCceeeEEeeEEEEeCCCCCccccccceeEEEECCCcceEEeeeEEEeCCCCCeEEEEEccCccceEeeeeEecC-
Q psy675 133 VMFVEGAKNAYLGHVTLKFSPEAPSTVQHHKHYCLEVGEHATPTIDHCIIRSTSVVGAAVCVSGVCASPTLRHCDISDC- 211 (1175)
Q Consensus 133 v~~~~g~~~~~l~~lti~~~~~~~~~~~~~~~~~i~v~~~~~~~i~~c~i~~~~~~g~~v~v~g~~a~~~i~~c~i~~~- 211 (1175)
+....+ +++++|.+.+......+. ....+.+....+++|++.++.++.. -.+.+.+ ...+++++-+|...
T Consensus 132 wi~f~~-----v~nv~I~G~G~IDG~G~~-ww~~l~~~~~~nv~v~gitl~nsp~--~~i~i~~-~~nv~i~~i~I~a~~ 202 (409)
T PLN03010 132 WISFST-----VSGLMIDGSGTIDGRGSS-FWEALHISKCDNLTINGITSIDSPK--NHISIKT-CNYVAISKINILAPE 202 (409)
T ss_pred eEEEec-----ccccEEeeceEEeCCCcc-ccceEEEEeecCeEEeeeEEEcCCc--eEEEEec-cccEEEEEEEEeCCC
Confidence 111112 245555554322111111 1124666667889999999988743 4566664 45799999999863
Q ss_pred ---cceeEEEeeceeEEEEeeEEEecCceeEEEeccC-cceEEecEEEecccceEEE
Q psy675 212 ---ENVGLYVTDYAQGLYEDNEISRNALAGIWVKNYA-NPIMRRNHIHHGRDVGIFT 264 (1175)
Q Consensus 212 ---~~~GI~v~~~s~~~ie~c~i~~~~~~gI~v~~~a-~~~i~~~~I~~~~~~GI~~ 264 (1175)
-..||-+......++++|.|.. ++.+|.++..+ ...|+++.... ++||.+
T Consensus 203 ~s~NTDGiDi~~s~nV~I~n~~I~~-gDDcIaiksgs~ni~I~~~~C~~--gHGisI 256 (409)
T PLN03010 203 TSPNTDGIDISYSTNINIFDSTIQT-GDDCIAINSGSSNINITQINCGP--GHGISV 256 (409)
T ss_pred CCCCCCceeeeccceEEEEeeEEec-CCCeEEecCCCCcEEEEEEEeEC--cCCEEE
Confidence 2478988888889999998884 56789988765 55666555543 356654
No 56
>PF07602 DUF1565: Protein of unknown function (DUF1565); InterPro: IPR011459 These proteins share a region of homology in their N termini, and are found in several phylogenetically diverse bacteria and in the archaeon Methanosarcina acetivorans. Some of these proteins also contain characterised domains such as IPR001119 from INTERPRO (e.g. Q8YWJ6 from SWISSPROT) and IPR005084 from INTERPRO (e.g. Q9FBS2 from SWISSPROT).
Probab=97.88 E-value=0.00012 Score=78.49 Aligned_cols=102 Identities=28% Similarity=0.431 Sum_probs=61.8
Q ss_pred ceEEEecCCceeEeCceEEeceeeeEEEEcee-eEE-----EeceeEecCceeceEEecCCCc---EEEeeeEeeceeee
Q psy675 1046 AGVWITSNSNPTIRRNEIYNGHQGGVYIFGEG-RGL-----IEHNNIYGNALAGIQIRTSSDP---IVRHNKIHHGQHGG 1116 (1175)
Q Consensus 1046 ~Gi~i~~~~~~~i~~n~i~~~~~~GI~~~~~g-~g~-----i~~n~i~~n~~~gi~i~~~~~~---~v~~n~i~~~~~~g 1116 (1175)
.||||+.. +|+|..|+|+++...||++.... ... |++|.++.+. .||.+.....| .|++|.|+++.- |
T Consensus 115 ~Gi~Iess-~~tI~Nntf~~~~~~GI~v~g~~~~~~i~~~vI~GN~~~~~~-~Gi~i~~~~~~~~n~I~NN~I~~N~~-G 191 (246)
T PF07602_consen 115 TGIWIESS-SPTIANNTFTNNGREGIFVTGTSANPGINGNVISGNSIYFNK-TGISISDNAAPVENKIENNIIENNNI-G 191 (246)
T ss_pred eEEEEecC-CcEEEeeEEECCccccEEEEeeecCCcccceEeecceEEecC-cCeEEEcccCCccceeeccEEEeCCc-C
Confidence 44555333 45555555555545555444332 222 3334444444 59999888888 789999988776 8
Q ss_pred EEEEecceeeeeecceEEEeeeeeccceeeEEEe
Q psy675 1117 VYVHEKGVGLIEENEGFFEANDIHNNRIAGFEVK 1150 (1175)
Q Consensus 1117 i~~~~~~~~~~~~~~~~~~~n~~~~n~~~~~~~~ 1150 (1175)
|-+-..+--|=...+...-+|.|++|.++.++..
T Consensus 192 i~~~~~~pDlG~~s~~~~g~N~~~~N~~~Dl~~~ 225 (246)
T PF07602_consen 192 IVAIGDAPDLGTGSEGSPGNNIFRNNGRYDLNNS 225 (246)
T ss_pred eEeeccCCccccCCCCCCCCcEEecCcceeeEec
Confidence 8876444222222233355799999999999983
No 57
>PLN02698 Probable pectinesterase/pectinesterase inhibitor
Probab=97.35 E-value=0.0043 Score=74.11 Aligned_cols=132 Identities=12% Similarity=0.198 Sum_probs=86.2
Q ss_pred CCCCCCcchHHHHHhcCcccCCCccEEEEeCceeeeeEEEECcceEEEecCCCCcceeEEEecCCCceEEEecCceeeEE
Q psy675 65 GRKLAHFDTIQAALDHGDELGQSAPLVFVHSGVYRGEFLVLDSDVIIIGAAPGNVAESVILERDTESTVMFVEGAKNAYL 144 (1175)
Q Consensus 65 ~~~~~~~~tIq~Al~~a~~gd~~~~~I~v~~G~Y~e~~l~I~k~v~l~G~g~g~~~~~v~i~~~~~~~v~~~~g~~~~~l 144 (1175)
+...++|+|||+||+++|++. |.+.- +|+-.... +.+.+ .....++.+. ++++..
T Consensus 220 ~dGsG~f~tiq~Ai~a~p~~~----------g~~~T---iIt~~~~~-~~g~~---------t~~SaT~~v~--~~~F~a 274 (497)
T PLN02698 220 KDGTGNYETVSEAITAAHGNH----------GKYST---VIVGDDSV-TGGTS---------VPDTATFTIT--GDGFIA 274 (497)
T ss_pred CCCCCCcccHHHHHHhhhhcC----------CCCce---EEEeCCcc-cCCCc---------cccceeEEEE--CCCeEE
Confidence 557889999999999998862 43331 12211111 01110 1234556665 689999
Q ss_pred eeEEEEeCCCCCccccccceeEEEECCCcceEEeeeEEEeCCCCCeEEEEEccCccceEeeeeEecCcceeEEEeeceeE
Q psy675 145 GHVTLKFSPEAPSTVQHHKHYCLEVGEHATPTIDHCIIRSTSVVGAAVCVSGVCASPTLRHCDISDCENVGLYVTDYAQG 224 (1175)
Q Consensus 145 ~~lti~~~~~~~~~~~~~~~~~i~v~~~~~~~i~~c~i~~~~~~g~~v~v~g~~a~~~i~~c~i~~~~~~GI~v~~~s~~ 224 (1175)
++|||++..... .+...++.+. .....+.+|.|.+.. .++++.. .+-.+++|.|++.- =++.+.+.+
T Consensus 275 ~nitf~Ntag~~----~~QAvAl~v~-~D~~~fy~c~~~G~Q---DTLy~~~--~rqyy~~C~I~G~v---DFIFG~a~a 341 (497)
T PLN02698 275 RDIGFKNAAGPK----GEQAIALSIT-SDHSVLYRCSIAGYQ---DTLYAAA--LRQFYRECDIYGTI---DFIFGNAAA 341 (497)
T ss_pred EeeEEEECCCCC----CCceEEEEec-CCcEEEEcceeeccc---chheeCC--CcEEEEeeEEEecc---ceEecccce
Confidence 999999875421 1112356665 478889999998854 4677653 46788999998764 356688888
Q ss_pred EEEeeEEEec
Q psy675 225 LYEDNEISRN 234 (1175)
Q Consensus 225 ~ie~c~i~~~ 234 (1175)
.+++|+|...
T Consensus 342 vf~~C~i~~~ 351 (497)
T PLN02698 342 VFQNCYLFLR 351 (497)
T ss_pred eecccEEEEe
Confidence 9999998753
No 58
>PF00295 Glyco_hydro_28: Glycosyl hydrolases family 28; InterPro: IPR000743 O-Glycosyl hydrolases 3.2.1. from EC are a widespread group of enzymes that hydrolyse the glycosidic bond between two or more carbohydrates, or between a carbohydrate and a non-carbohydrate moiety. A classification system for glycosyl hydrolases, based on sequence similarity, has led to the definition of 85 different families [, ]. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. Glycoside hydrolase family 28 GH28 from CAZY comprises enzymes with several known activities; polygalacturonase (3.2.1.15 from EC); exo-polygalacturonase (3.2.1.67 from EC); exo-polygalacturonase (3.2.1.82 from EC); rhamnogalacturonase (EC not defined). Polygalacturonase (PG) (pectinase) [, ] catalyses the random hydrolysis of 1,4-alpha-D-galactosiduronic linkages in pectate and other galacturonans. In fruit, polygalacturonase plays an important role in cell wall metabolism during ripening. In plant bacterial pathogens such as Erwinia carotovora or Ralstonia solanacearum (Pseudomonas solanacearum) and fungal pathogens such as Aspergillus niger, polygalacturonase is involved in maceration and soft-rotting of plant tissue. Exo-poly-alpha-D-galacturonosidase (3.2.1.82 from EC) (exoPG) [] hydrolyses peptic acid from the non-reducing end, releasing digalacturonate. PG and exoPG share a few regions of sequence similarity, and belong to family 28 of the glycosyl hydrolases.; GO: 0004650 polygalacturonase activity, 0005975 carbohydrate metabolic process; PDB: 1KCC_A 1KCD_A 1K5C_A 1HG8_A 2IQ7_A 2UVF_B 1RMG_A 1CZF_B 3JUR_C 1BHE_A ....
Probab=97.20 E-value=0.046 Score=62.81 Aligned_cols=166 Identities=18% Similarity=0.168 Sum_probs=97.2
Q ss_pred cEEEEeCceeeeeEEEEC------cceEEEecCCCCcceeEEEecCCCceEEEecCceeeEEee-EEEEeCCCCC---c-
Q psy675 89 PLVFVHSGVYRGEFLVLD------SDVIIIGAAPGNVAESVILERDTESTVMFVEGAKNAYLGH-VTLKFSPEAP---S- 157 (1175)
Q Consensus 89 ~~I~v~~G~Y~e~~l~I~------k~v~l~G~g~g~~~~~v~i~~~~~~~v~~~~g~~~~~l~~-lti~~~~~~~---~- 157 (1175)
.+|+||+|+|.-.+|.++ ..++|.|... .+ ..-......++....++.++.+.| =+|.+.+..- .
T Consensus 7 ~~v~vP~g~~~~~~~~l~~~l~~~~~~~l~G~~~--~~--~~~~~~~~~~~i~~~~~~ni~i~G~G~IDG~G~~w~~~~~ 82 (326)
T PF00295_consen 7 GTVVVPAGTYLLGPLFLKSTLHSDVGLTLDGTIN--FS--YDNWEGPNSALIYAENAENITITGKGTIDGNGQAWWDGSG 82 (326)
T ss_dssp ESEEESTSTEEEEETSEETECETTCEEEEESEEE--EG---EESTSE-SEEEEEESEEEEECTTSSEEE--GGGTCSSCT
T ss_pred CEEEECCCCeEEceeEEEcccCCCeEEEEEEEEE--eC--CCcccCCccEEEEEEceEEEEecCCceEcCchhhhhcccc
Confidence 489999999987555554 3366665331 00 000001113343333445555554 4555544310 0
Q ss_pred c---ccccceeEEEECCCcceEEeeeEEEeCCCCCeEEEEEccCccceEeeeeEecCc----ceeEEEeeceeEEEEeeE
Q psy675 158 T---VQHHKHYCLEVGEHATPTIDHCIIRSTSVVGAAVCVSGVCASPTLRHCDISDCE----NVGLYVTDYAQGLYEDNE 230 (1175)
Q Consensus 158 ~---~~~~~~~~i~v~~~~~~~i~~c~i~~~~~~g~~v~v~g~~a~~~i~~c~i~~~~----~~GI~v~~~s~~~ie~c~ 230 (1175)
. ....+...+.+.....++|++..+..+.. -.+.+. ....+++++.+|.... ..||-+.+....++++|.
T Consensus 83 ~~~~~~~~rp~~i~~~~~~~~~i~~i~~~nsp~--w~~~~~-~~~nv~i~~i~I~~~~~~~NtDGid~~~s~nv~I~n~~ 159 (326)
T PF00295_consen 83 DANNNGQRRPRLIRFNNCKNVTIEGITIRNSPF--WHIHIN-DCDNVTISNITINNPANSPNTDGIDIDSSKNVTIENCF 159 (326)
T ss_dssp THCCSSSSSSESEEEEEEEEEEEESEEEES-SS--ESEEEE-SEEEEEEESEEEEEGGGCTS--SEEEESEEEEEEESEE
T ss_pred ccccccccccceeeeeeecceEEEeeEecCCCe--eEEEEE-ccCCeEEcceEEEecCCCCCcceEEEEeeeEEEEEEee
Confidence 0 00011122444444578888888888743 345555 3468999999998643 479999888889999999
Q ss_pred EEecCceeEEEeccC-cceEEecEEEecccceEEE
Q psy675 231 ISRNALAGIWVKNYA-NPIMRRNHIHHGRDVGIFT 264 (1175)
Q Consensus 231 i~~~~~~gI~v~~~a-~~~i~~~~I~~~~~~GI~~ 264 (1175)
|.. ++.+|.++..+ .+.+++|++... .|+.+
T Consensus 160 i~~-gDD~Iaiks~~~ni~v~n~~~~~g--hGisi 191 (326)
T PF00295_consen 160 IDN-GDDCIAIKSGSGNILVENCTCSGG--HGISI 191 (326)
T ss_dssp EES-SSESEEESSEECEEEEESEEEESS--SEEEE
T ss_pred ccc-ccCcccccccccceEEEeEEEecc--cccee
Confidence 974 56789998776 888999998753 45554
No 59
>smart00656 Amb_all Amb_all domain.
Probab=97.13 E-value=0.017 Score=60.54 Aligned_cols=97 Identities=10% Similarity=0.119 Sum_probs=62.4
Q ss_pred EEEECcceEEEecCCCCcceeEEEecCCCceEEEecCceeeEEeeEEEEeCCCCCccccccceeEEEECCCcceEEeeeE
Q psy675 102 FLVLDSDVIIIGAAPGNVAESVILERDTESTVMFVEGAKNAYLGHVTLKFSPEAPSTVQHHKHYCLEVGEHATPTIDHCI 181 (1175)
Q Consensus 102 ~l~I~k~v~l~G~g~g~~~~~v~i~~~~~~~v~~~~g~~~~~l~~lti~~~~~~~~~~~~~~~~~i~v~~~~~~~i~~c~ 181 (1175)
+|.|.+..||+|++++. .|.+ ..|.+.. +.++.+++|+|+......+ ....+|.+.....+-|++|.
T Consensus 11 ~i~v~snkTI~G~~~~~-----~i~g---~gl~i~~-~~NVIirnl~i~~~~~~~~----~~~D~i~~~~~~~VwIDHct 77 (190)
T smart00656 11 TIIINSNKTIDGRGSKV-----EIKG---GGLTIKS-VSNVIIRNLTIHDPKPVYG----SDGDAISIDGSSNVWIDHVS 77 (190)
T ss_pred eEEeCCCCEEEecCCCc-----EEEe---eEEEEEe-cceEEEeCCEEECCccCCC----CCCCEEEEeCCCeEEEEccE
Confidence 68899999999987432 3443 3466653 6799999999997543211 01246777777889999999
Q ss_pred EEeCC--------CCCeEEEEEccCccceEeeeeEecCc
Q psy675 182 IRSTS--------VVGAAVCVSGVCASPTLRHCDISDCE 212 (1175)
Q Consensus 182 i~~~~--------~~g~~v~v~g~~a~~~i~~c~i~~~~ 212 (1175)
|+... .++ .+.+......+++..|.|.+..
T Consensus 78 ~s~~~~~~~~~~~~D~-~~di~~~s~~vTvs~~~f~~h~ 115 (190)
T smart00656 78 LSGCTVTGFGDDTYDG-LIDIKNGSTYVTISNNYFHNHW 115 (190)
T ss_pred eEcceeccCCCCCCCc-cEEECcccccEEEECceEecCC
Confidence 98751 112 2333333356777777776544
No 60
>COG5434 PGU1 Endopygalactorunase [Cell envelope biogenesis, outer membrane]
Probab=96.80 E-value=0.058 Score=64.60 Aligned_cols=44 Identities=27% Similarity=0.318 Sum_probs=34.1
Q ss_pred CCCCcchHHHHHhcCcccCCCccEEEEeCceeeeeEEEECcceEEE
Q psy675 67 KLAHFDTIQAALDHGDELGQSAPLVFVHSGVYRGEFLVLDSDVIII 112 (1175)
Q Consensus 67 ~~~~~~tIq~Al~~a~~gd~~~~~I~v~~G~Y~e~~l~I~k~v~l~ 112 (1175)
..++-..||+||+++++. .++++.||||+|.-.+|.+++.++|.
T Consensus 95 ~t~~~~aiq~AI~~ca~a--~Gg~V~lPaGtylsg~l~LKS~~~L~ 138 (542)
T COG5434 95 ATDNTAAIQAAIDACASA--GGGTVLLPAGTYLSGPLFLKSNVTLH 138 (542)
T ss_pred CccCHHHHHHHHHhhhhh--cCceEEECCceeEeeeEEEecccEEE
Confidence 444556899999999842 23599999999976688888876665
No 61
>PF00544 Pec_lyase_C: Pectate lyase; InterPro: IPR002022 Pectate lyase 4.2.2.2 from EC is an enzyme involved in the maceration and soft rotting of plant tissue. Pectate lyase is responsible for the eliminative cleavage of pectate, yielding oligosaccharides with 4-deoxy-alpha-D-mann-4-enuronosyl groups at their non-reducing ends. The protein is maximally expressed late in pollen development. It has been suggested that the pollen expression of pectate lyase genes might relate to a requirement for pectin degradation during pollen tube growth []. The structure and the folding kinetics of one member of this family, pectate lyase C (pelC)1 from Erwinia chrysanthemi has been investigated in some detail [,]. PelC contains a parallel beta-helix folding motif. The majority of the regular secondary structure is composed of parallel beta-sheets (about 30%). The individual strands of the sheets are connected by unordered loops of varying length. The backbone is then formed by a large helix composed of beta-sheets. There are two disulphide bonds in pelC and 12 proline residues. One of these prolines, Pro220, is involved in a cis peptide bond. he folding mechanism of pelC involves two slow phases that have been attributed to proline isomerization. Some of the proteins in this family are allergens. Allergies are hypersensitivity reactions of the immune system to specific substances called allergens (such as pollen, stings, drugs, or food) that, in most people, result in no symptoms. A nomenclature system has been established for antigens (allergens) that cause IgE-mediated atopic allergies in humans [WHO/IUIS Allergen Nomenclature Subcommittee King T.P., Hoffmann D., Loewenstein H., Marsh D.G., Platts-Mills T.A.E., Thomas W. Bull. World Health Organ. 72:797-806(1994)]. This nomenclature system is defined by a designation that is composed of the first three letters of the genus; a space; the first letter of the species name; a space and an arabic number. In the event that two species names have identical designations, they are discriminated from one another by adding one or more letters (as necessary) to each species designation. The allergens in this family include allergens with the following designations: Amb a 1, Amb a 2, Amb a 3, Cha o 1, Cup a 1, Cry j 1, Jun a 1. Two of the major allergens in the pollen of short ragweed (Ambrosia artemisiifolia) are Amb aI and Amb aII. The primary structure of Amb aII has been deduced and has been shown to share ~65% sequence identity with the Amb alpha I multigene family of allergens []. Members of the Amb aI/aII family include Nicotiana tabacum (Common tobacco) pectate lyase, which is similar to the deduced amino acid sequences of two pollen-specific pectate lyase genes identified in Solanum lycopersicum (Tomato) (Lycopersicon esculentum) []; Cry jI, a major allergenic glycoprotein of Cryptomeria japonica (Japanese cedar) - the most common pollen allergen in Japan []; and P56 and P59, which share sequence similarity with pectate lyases of plant pathogenic bacteria [].; PDB: 1O8M_A 1O8K_A 1O8E_A 1O8H_A 2PEC_A 1PLU_A 1O8I_A 1O8J_A 1O8D_A 1O8F_A ....
Probab=96.78 E-value=0.031 Score=59.26 Aligned_cols=112 Identities=16% Similarity=0.216 Sum_probs=63.5
Q ss_pred EEEEeCceeee-eEEEECcceEEEecCCCCcceeEEEecCCCceEEEecCceeeEEeeEEEEeC---CCCCccccc--cc
Q psy675 90 LVFVHSGVYRG-EFLVLDSDVIIIGAAPGNVAESVILERDTESTVMFVEGAKNAYLGHVTLKFS---PEAPSTVQH--HK 163 (1175)
Q Consensus 90 ~I~v~~G~Y~e-~~l~I~k~v~l~G~g~g~~~~~v~i~~~~~~~v~~~~g~~~~~l~~lti~~~---~~~~~~~~~--~~ 163 (1175)
+|+--.|+... .+|.+....||+|.+.+. .|... .+.+..++.++.+++|+|+.- +........ ..
T Consensus 3 ~ii~~~g~i~~~~~i~v~snkTi~G~g~~~-----~i~~~---G~~i~~~~~NVIirNl~~~~~~~~~~~~~~~~~~~~~ 74 (200)
T PF00544_consen 3 LIIKVSGTIDLKSPISVGSNKTIIGIGAGA-----TIIGG---GLRIIKGASNVIIRNLRFRNVPVDPGPDWSGDGDSSD 74 (200)
T ss_dssp EEEEEHHCCHHHCEEEEESSEEEEEETTTT-----EEESS---EEEEEESCEEEEEES-EEECEEEECSTEEETTEEECS
T ss_pred EEEEEEeEEccCCeEEECCCcEEEEccCCe-----EEECc---eEEEecCCCeEEEECCEEEeccccCCcccCCCccccC
Confidence 45555577753 378999999999987542 34432 355555689999999999872 100000000 01
Q ss_pred eeEEEECCCcceEEeeeEEEeC--------CCCCeEEEEEccCccceEeeeeEecC
Q psy675 164 HYCLEVGEHATPTIDHCIIRST--------SVVGAAVCVSGVCASPTLRHCDISDC 211 (1175)
Q Consensus 164 ~~~i~v~~~~~~~i~~c~i~~~--------~~~g~~v~v~g~~a~~~i~~c~i~~~ 211 (1175)
..++.+....++-|++|.|+.. .. ..+.++.....++|.+|.|.+.
T Consensus 75 ~Dai~i~~~~nVWIDH~sfs~~~~~~~~~~~D--g~idi~~~s~~vTiS~n~f~~~ 128 (200)
T PF00544_consen 75 GDAISIDNSSNVWIDHCSFSWGNFECNSDSSD--GLIDIKKGSDNVTISNNIFDNH 128 (200)
T ss_dssp --SEEEESTEEEEEES-EEEETTS-GGGSSSS--SSEEEESSTEEEEEES-EEEEE
T ss_pred CCeEEEEecccEEEeccEEeccccccccccCC--ceEEEEeCCceEEEEchhcccc
Confidence 2345555566777888888776 32 2245544444566666666554
No 62
>PF14592 Chondroitinas_B: Chondroitinase B; PDB: 1OFM_A 1OFL_A 1DBO_A 1DBG_A.
Probab=96.55 E-value=0.28 Score=56.91 Aligned_cols=134 Identities=18% Similarity=0.205 Sum_probs=47.3
Q ss_pred CCceEeeeeEEcCCCccEEEEeCceeEEeeceeeccc----cccEEEeecCCceEeeeEEecCc----eeeEEEeCCCCc
Q psy675 460 SNPTLKRNKIFDGRDGGICIFNGGKGVLEENDIFRNA----QAGVLISTQSHPMLRRNRIFDGF----AAGVEITNTPLS 531 (1175)
Q Consensus 460 s~~~i~~n~i~~~~~~GI~i~~~~~~~i~~n~i~~n~----~~GI~v~~~~~~~i~~n~I~~~~----~~GI~i~~~~~~ 531 (1175)
+..++++|+|+.+. .+|.+..+...++++|-|.++. ..||.|... .-+|.+|-+.+.. ..++.+.++...
T Consensus 223 ~~N~ir~Ntf~es~-G~ltlRHGn~n~V~gN~FiGng~~~~tGGIRIi~~-~H~I~nNY~~gl~g~~~~~~~~v~ng~p~ 300 (425)
T PF14592_consen 223 SDNTIRNNTFRESQ-GSLTLRHGNRNTVEGNVFIGNGVKEGTGGIRIIGE-GHTIYNNYFEGLTGTRFRGALAVMNGVPN 300 (425)
T ss_dssp BT-EEES-EEES-S-SEEEEEE-SS-EEES-EEEE-SSSS-B--EEE-SB-S-EEES-EEEESSB-TTTTSEE-EEE--B
T ss_pred CCceEeccEEEecc-ceEEEecCCCceEeccEEecCCCcCCCCceEEecC-CcEEEcceeeccccceeecceeeccCCCC
Confidence 34455555555543 3455555555555555555543 125555432 2244444444422 122332221111
Q ss_pred c---ccccccceEEeeeeEeccccceEEEee-------------------ccCcceeeeeEeecccccEEEEecCceEEe
Q psy675 532 N---LLINKENGFFEANDIHNNRIAGFEVKA-------------------GANPTVVHCEIHHGQTGGIYVHENGLGQFI 589 (1175)
Q Consensus 532 ~---~~~~~~n~~v~~n~i~~n~~~Gi~v~~-------------------~~~~~i~~n~i~~n~~~GI~i~~~~~~~i~ 589 (1175)
+ ......+++|.+|++.++. ..|.+.. .-+.++.+|.|.......+.+.......+.
T Consensus 301 s~ln~y~qv~nv~I~~NT~In~~-~~i~~g~g~~~~~~~~~~~~~i~s~~p~~~~~~nN~i~~~~~~~~~~~~~d~~~~~ 379 (425)
T PF14592_consen 301 SPLNRYDQVKNVLIANNTFINCK-SPIHFGAGSDEERKDVLPASNIRSARPINSTFANNIIYNDDGDQYPIFNNDKFNFK 379 (425)
T ss_dssp STTSTT---BSEEEES-EEES-S-EEEESST-THHHHHHHHHHCT---B---SEEEES-EEE--SS----SEE-TT--TT
T ss_pred CCcccccccceeEEecceEEccC-CceEEccccccccccccccccccccCCceEEeeCCeEEcCCCCccceEecccceec
Confidence 1 1222455777777777776 3444432 123345566665544333222222333555
Q ss_pred cceeccC
Q psy675 590 DNRIHSN 596 (1175)
Q Consensus 590 ~n~i~~n 596 (1175)
+|.+..+
T Consensus 380 ~N~~~~~ 386 (425)
T PF14592_consen 380 NNIINNN 386 (425)
T ss_dssp SSEEES-
T ss_pred cceeecc
Confidence 5555544
No 63
>TIGR03804 para_beta_helix parallel beta-helix repeat (two copies). This model represents a tandem pair of an approximately 22-amino acid (each) repeat homologous to the beta-strand repeats that stack in a right-handed parallel beta-helix in the periplasmic C-5 mannuronan epimerase, AlgA, of Pseudomonas aeruginosa. A homology domain consisting of a longer tandem array of these repeats is described in the SMART database as CASH (SM00722), and is found in many carbohydrate-binding proteins and sugar hydrolases. A single repeat is represented by SM00710. This TIGRFAMs model represents a flavor of the parallel beta-helix-forming repeat based on prokaryotic sequences only in its seed alignment, although it also finds many eukaryotic sequences.
Probab=96.50 E-value=0.0059 Score=47.34 Aligned_cols=43 Identities=23% Similarity=0.380 Sum_probs=26.6
Q ss_pred cEEEecCCCceEEeeeeecCccccEEEecCccceeecceEEecc
Q psy675 803 GVLISTQSHPMLRRNRIFDGFAAGVEITNNATATLEDNQIFNNR 846 (1175)
Q Consensus 803 Gi~l~~~~~~~i~~N~I~~n~~~GI~i~~~~~~~v~~N~i~~N~ 846 (1175)
||++..+..+.|++|+|+++.. ||++......++.+|++.+|.
T Consensus 1 GI~l~~s~~~~i~~N~i~~~~~-GI~~~~s~~n~i~~N~~~~n~ 43 (44)
T TIGR03804 1 GIYLESSSNNTLENNTASNNSY-GIYLTDSSNNTLSNNTASSNS 43 (44)
T ss_pred CEEEEecCCCEEECcEEeCCCC-EEEEEeCCCCEeECCEEEcCc
Confidence 5566666666666666666555 666666666666666666553
No 64
>TIGR03804 para_beta_helix parallel beta-helix repeat (two copies). This model represents a tandem pair of an approximately 22-amino acid (each) repeat homologous to the beta-strand repeats that stack in a right-handed parallel beta-helix in the periplasmic C-5 mannuronan epimerase, AlgA, of Pseudomonas aeruginosa. A homology domain consisting of a longer tandem array of these repeats is described in the SMART database as CASH (SM00722), and is found in many carbohydrate-binding proteins and sugar hydrolases. A single repeat is represented by SM00710. This TIGRFAMs model represents a flavor of the parallel beta-helix-forming repeat based on prokaryotic sequences only in its seed alignment, although it also finds many eukaryotic sequences.
Probab=96.50 E-value=0.0067 Score=47.04 Aligned_cols=39 Identities=26% Similarity=0.382 Sum_probs=15.9
Q ss_pred EEEEeCCccEEeceEEEecccccEEEEccCccEEeceEEE
Q psy675 735 VLVYNGGLGLLEQNEIFDNAMAGVWIKTESNPTLKRNKIF 774 (1175)
Q Consensus 735 I~l~~~~~~~i~~N~i~~N~~~GI~v~~~~~~~i~~N~I~ 774 (1175)
|.|..+....|++|+++.+.. ||++..++...+++|.+.
T Consensus 2 I~l~~s~~~~i~~N~i~~~~~-GI~~~~s~~n~i~~N~~~ 40 (44)
T TIGR03804 2 IYLESSSNNTLENNTASNNSY-GIYLTDSSNNTLSNNTAS 40 (44)
T ss_pred EEEEecCCCEEECcEEeCCCC-EEEEEeCCCCEeECCEEE
Confidence 334333334444444444433 444444444444444433
No 65
>PF01696 Adeno_E1B_55K: Adenovirus EB1 55K protein / large t-antigen; InterPro: IPR002612 This family consists of adenovirus E1B 55 kDa protein or large t-antigen. E1B 55 kDa binds p53 the tumor suppressor protein converting it from a transcriptional activator which responds to damaged DNA in to an unregulated repressor of genes with a p53 binding site []. This protects the virus against p53 induced host antiviral responses and prevents apoptosis as induced by the adenovirus E1A protein []. The E1B region of adenovirus encodes two proteins E1B 55 kDa, the large t-antigen as found in this family and E1B 19 kDa IPR002924 from INTERPRO, the small t-antigen. Both of these proteins inhibit E1A induced apoptosis.
Probab=96.45 E-value=0.48 Score=54.13 Aligned_cols=120 Identities=13% Similarity=0.119 Sum_probs=67.3
Q ss_pred ceeEEEEeeEEEecC-ceeEEEeccCcceEEecEEEecccceEEEecCCCcccccCCcceEecceeeecccccEEEEecC
Q psy675 221 YAQGLYEDNEISRNA-LAGIWVKNYANPIMRRNHIHHGRDVGIFTFDNGHIFPISNSNPTIRRNEIYNGHQGGVYIFGEG 299 (1175)
Q Consensus 221 ~s~~~ie~c~i~~~~-~~gI~v~~~a~~~i~~~~I~~~~~~GI~~~~~g~g~~~~~s~~~i~~n~I~~~~~~GI~v~~~~ 299 (1175)
-...++.++.|.+-. ..|+++....+.+|.+|.+.+..+. .+.-.+
T Consensus 120 M~~VtF~ni~F~~~~~~~g~~f~~~t~~~~hgC~F~gf~g~---------------------------------cl~~~~ 166 (386)
T PF01696_consen 120 MEGVTFVNIRFEGRDTFSGVVFHANTNTLFHGCSFFGFHGT---------------------------------CLESWA 166 (386)
T ss_pred eeeeEEEEEEEecCCccceeEEEecceEEEEeeEEecCcce---------------------------------eEEEcC
Confidence 345566666666655 5666666666666666666654422 222234
Q ss_pred ceEEEeeEEEecccccEEEecCCCceEEceEEEcCccccEEEEecceeEEeeeEEeecceeeEEEecCCCceEeeeEEEe
Q psy675 300 RGLIEHNNIYGNALAGIQIRTSSDPIVRHNKIHHGQHGGVYVHEKGVGLIEENEVYANTLAGVWITTGSAPVLRRNRIHS 379 (1175)
Q Consensus 300 ~~~i~~n~I~~n~~~GI~i~~~s~~~i~~n~i~~~~~~GI~v~~~s~~~i~~n~i~~n~~~GI~v~~~s~~~i~~n~i~~ 379 (1175)
.+.+++|++.++. .||.-.+.+.+.+++|.+..+. -||.. .+...|.+|.++++. .-+.+.+ ...+.+|.|..
T Consensus 167 ~~~VrGC~F~~C~-~gi~~~~~~~lsVk~C~FekC~-igi~s--~G~~~i~hn~~~ec~-Cf~l~~g--~g~i~~N~v~~ 239 (386)
T PF01696_consen 167 GGEVRGCTFYGCW-KGIVSRGKSKLSVKKCVFEKCV-IGIVS--EGPARIRHNCASECG-CFVLMKG--TGSIKHNMVCG 239 (386)
T ss_pred CcEEeeeEEEEEE-EEeecCCcceEEeeheeeeheE-EEEEe--cCCeEEecceecccc-eEEEEcc--cEEEeccEEeC
Confidence 4556666665543 3555555566666777776666 55533 445566677666664 3333332 23566666654
Q ss_pred C
Q psy675 380 G 380 (1175)
Q Consensus 380 ~ 380 (1175)
.
T Consensus 240 ~ 240 (386)
T PF01696_consen 240 P 240 (386)
T ss_pred C
Confidence 3
No 66
>PF12541 DUF3737: Protein of unknown function (DUF3737) ; InterPro: IPR022208 This family of proteins is found in bacteria, archaea and eukaryotes. Proteins in this family are typically between 281 and 297 amino acids in length.
Probab=96.00 E-value=1 Score=48.23 Aligned_cols=33 Identities=24% Similarity=0.268 Sum_probs=16.5
Q ss_pred EEEEeeEEEecCceeEEEeccCcceEEecEEEecc
Q psy675 224 GLYEDNEISRNALAGIWVKNYANPIMRRNHIHHGR 258 (1175)
Q Consensus 224 ~~ie~c~i~~~~~~gI~v~~~a~~~i~~~~I~~~~ 258 (1175)
..+++|.+...+.+|||-. .+..+.+|.|+..+
T Consensus 60 ~~i~~~~f~~~aRa~iWYs--~~i~m~d~~i~apK 92 (277)
T PF12541_consen 60 IKIENCYFTEMARAAIWYS--NNITMKDSVIQAPK 92 (277)
T ss_pred eEEEeeEEeecceeeeeEe--CCEEEEeeeccCch
Confidence 4455555555555555542 24455555555443
No 67
>PLN02793 Probable polygalacturonase
Probab=95.71 E-value=1.5 Score=52.36 Aligned_cols=85 Identities=12% Similarity=0.035 Sum_probs=44.6
Q ss_pred cEEEEecceeEEeeeEEeecceeeEEEecCCCceEeeeEEEeC----ceeeEEEEeCCeeEEeeceeeccceecEEEe-c
Q psy675 338 GVYVHEKGVGLIEENEVYANTLAGVWITTGSAPVLRRNRIHSG----KQVGVYFYDNGHGKLEDNDIFNHLYSGVQIR-T 412 (1175)
Q Consensus 338 GI~v~~~s~~~i~~n~i~~n~~~GI~v~~~s~~~i~~n~i~~~----~~~GI~v~~~~~~~i~~n~I~~n~~~GI~i~-~ 412 (1175)
-|.+......+|++-++.+....-+.+..+.++++++-+|... ...||.+..+.+..|++|.|... ...|.+. +
T Consensus 179 ~i~f~~~~nv~v~gitl~nSp~~~i~~~~~~nv~i~~l~I~~p~~spNTDGIdi~~s~nV~I~n~~I~~g-DDcIaik~~ 257 (443)
T PLN02793 179 AITFHKCKDLRVENLNVIDSQQMHIAFTNCRRVTISGLKVIAPATSPNTDGIHISASRGVVIKDSIVRTG-DDCISIVGN 257 (443)
T ss_pred EEEEEeeccEEEECeEEEcCCCeEEEEEccCcEEEEEEEEECCCCCCCCCcEeeeccceEEEEeCEEeCC-CCeEEecCC
Confidence 4555555566677777777666666666666666666666542 12355554444445555544432 2344443 2
Q ss_pred CCccEEeccEE
Q psy675 413 GSNPIIRGNKI 423 (1175)
Q Consensus 413 ~s~~~i~~n~i 423 (1175)
+.+++|+++..
T Consensus 258 s~nI~I~n~~c 268 (443)
T PLN02793 258 SSRIKIRNIAC 268 (443)
T ss_pred cCCEEEEEeEE
Confidence 23344444433
No 68
>PLN02218 polygalacturonase ADPG
Probab=95.62 E-value=1.7 Score=51.60 Aligned_cols=85 Identities=12% Similarity=0.063 Sum_probs=48.1
Q ss_pred cEEEEecceeEEeeeEEeecceeeEEEecCCCceEeeeEEEeC----ceeeEEEEeCCeeEEeeceeeccceecEEEecC
Q psy675 338 GVYVHEKGVGLIEENEVYANTLAGVWITTGSAPVLRRNRIHSG----KQVGVYFYDNGHGKLEDNDIFNHLYSGVQIRTG 413 (1175)
Q Consensus 338 GI~v~~~s~~~i~~n~i~~n~~~GI~v~~~s~~~i~~n~i~~~----~~~GI~v~~~~~~~i~~n~I~~n~~~GI~i~~~ 413 (1175)
-|.+......+|++-++.+.....+.+..+.++++++-+|... ...||.+..+....|++|.|... ...|.+..+
T Consensus 194 ~i~f~~~~nv~I~gitl~nSp~w~i~~~~~~nV~i~~v~I~a~~~spNTDGIdi~ss~nV~I~n~~I~tG-DDcIaIksg 272 (431)
T PLN02218 194 ALTFYNSKSLIVKNLRVRNAQQIQISIEKCSNVQVSNVVVTAPADSPNTDGIHITNTQNIRVSNSIIGTG-DDCISIESG 272 (431)
T ss_pred EEEEEccccEEEeCeEEEcCCCEEEEEEceeeEEEEEEEEeCCCCCCCCCcEeecccceEEEEccEEecC-CceEEecCC
Confidence 4455556666777777777777777777777777776666541 12455555445555555555432 244555443
Q ss_pred C-ccEEeccEE
Q psy675 414 S-NPIIRGNKI 423 (1175)
Q Consensus 414 s-~~~i~~n~i 423 (1175)
+ +++++++.+
T Consensus 273 s~nI~I~n~~c 283 (431)
T PLN02218 273 SQNVQINDITC 283 (431)
T ss_pred CceEEEEeEEE
Confidence 3 344444444
No 69
>PLN03003 Probable polygalacturonase At3g15720
Probab=95.56 E-value=2.8 Score=49.73 Aligned_cols=40 Identities=10% Similarity=0.027 Sum_probs=19.9
Q ss_pred EEEEecceeEEeeeEEeecceeeEEEecCCCceEeeeEEE
Q psy675 339 VYVHEKGVGLIEENEVYANTLAGVWITTGSAPVLRRNRIH 378 (1175)
Q Consensus 339 I~v~~~s~~~i~~n~i~~n~~~GI~v~~~s~~~i~~n~i~ 378 (1175)
+.+.......|++-++.+....-+.+..+.++++++-+|.
T Consensus 141 l~f~~~~nv~I~gitl~NSp~w~i~i~~c~nV~i~~l~I~ 180 (456)
T PLN03003 141 LKFRSCNNLRLSGLTHLDSPMAHIHISECNYVTISSLRIN 180 (456)
T ss_pred EEEEecCCcEEeCeEEecCCcEEEEEeccccEEEEEEEEe
Confidence 3444444445555555555555555555555555554444
No 70
>PF12541 DUF3737: Protein of unknown function (DUF3737) ; InterPro: IPR022208 This family of proteins is found in bacteria, archaea and eukaryotes. Proteins in this family are typically between 281 and 297 amino acids in length.
Probab=95.50 E-value=2 Score=46.09 Aligned_cols=33 Identities=24% Similarity=0.237 Sum_probs=20.3
Q ss_pred eecCCceEeeeeEEcCCCccEEEEeCceeEEeeceee
Q psy675 457 KTESNPTLKRNKIFDGRDGGICIFNGGKGVLEENDIF 493 (1175)
Q Consensus 457 ~~~s~~~i~~n~i~~~~~~GI~i~~~~~~~i~~n~i~ 493 (1175)
+.+.++++.+|+|.+. -|++... ...+++|++.
T Consensus 191 W~SkNltliNC~I~g~--QpLCY~~--~L~l~nC~~~ 223 (277)
T PF12541_consen 191 WNSKNLTLINCTIEGT--QPLCYCD--NLVLENCTMI 223 (277)
T ss_pred EEcCCeEEEEeEEecc--CccEeec--ceEEeCcEee
Confidence 4556777777777764 3555443 3566777665
No 71
>smart00656 Amb_all Amb_all domain.
Probab=95.40 E-value=0.23 Score=52.11 Aligned_cols=66 Identities=20% Similarity=0.300 Sum_probs=34.5
Q ss_pred cEEEecCCCceEEceEEEcC------ccccEEEEecceeEEeeeEEeecc--------eee-EEEe-cCCCceEeeeEEE
Q psy675 315 GIQIRTSSDPIVRHNKIHHG------QHGGVYVHEKGVGLIEENEVYANT--------LAG-VWIT-TGSAPVLRRNRIH 378 (1175)
Q Consensus 315 GI~i~~~s~~~i~~n~i~~~------~~~GI~v~~~s~~~i~~n~i~~n~--------~~G-I~v~-~~s~~~i~~n~i~ 378 (1175)
|+.+....+++|++-+|++. ...+|.+.+....-|++|+|+... ..+ +.+. .+...+++.|.|.
T Consensus 33 gl~i~~~~NVIirnl~i~~~~~~~~~~~D~i~~~~~~~VwIDHct~s~~~~~~~~~~~~D~~~di~~~s~~vTvs~~~f~ 112 (190)
T smart00656 33 GLTIKSVSNVIIRNLTIHDPKPVYGSDGDAISIDGSSNVWIDHVSLSGCTVTGFGDDTYDGLIDIKNGSTYVTISNNYFH 112 (190)
T ss_pred EEEEEecceEEEeCCEEECCccCCCCCCCEEEEeCCCeEEEEccEeEcceeccCCCCCCCccEEECcccccEEEECceEe
Confidence 34443344555555555543 225676666666777777777641 122 2222 2345566666665
Q ss_pred eC
Q psy675 379 SG 380 (1175)
Q Consensus 379 ~~ 380 (1175)
+-
T Consensus 113 ~h 114 (190)
T smart00656 113 NH 114 (190)
T ss_pred cC
Confidence 43
No 72
>PF00295 Glyco_hydro_28: Glycosyl hydrolases family 28; InterPro: IPR000743 O-Glycosyl hydrolases 3.2.1. from EC are a widespread group of enzymes that hydrolyse the glycosidic bond between two or more carbohydrates, or between a carbohydrate and a non-carbohydrate moiety. A classification system for glycosyl hydrolases, based on sequence similarity, has led to the definition of 85 different families [, ]. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. Glycoside hydrolase family 28 GH28 from CAZY comprises enzymes with several known activities; polygalacturonase (3.2.1.15 from EC); exo-polygalacturonase (3.2.1.67 from EC); exo-polygalacturonase (3.2.1.82 from EC); rhamnogalacturonase (EC not defined). Polygalacturonase (PG) (pectinase) [, ] catalyses the random hydrolysis of 1,4-alpha-D-galactosiduronic linkages in pectate and other galacturonans. In fruit, polygalacturonase plays an important role in cell wall metabolism during ripening. In plant bacterial pathogens such as Erwinia carotovora or Ralstonia solanacearum (Pseudomonas solanacearum) and fungal pathogens such as Aspergillus niger, polygalacturonase is involved in maceration and soft-rotting of plant tissue. Exo-poly-alpha-D-galacturonosidase (3.2.1.82 from EC) (exoPG) [] hydrolyses peptic acid from the non-reducing end, releasing digalacturonate. PG and exoPG share a few regions of sequence similarity, and belong to family 28 of the glycosyl hydrolases.; GO: 0004650 polygalacturonase activity, 0005975 carbohydrate metabolic process; PDB: 1KCC_A 1KCD_A 1K5C_A 1HG8_A 2IQ7_A 2UVF_B 1RMG_A 1CZF_B 3JUR_C 1BHE_A ....
Probab=94.93 E-value=2 Score=49.38 Aligned_cols=98 Identities=16% Similarity=0.153 Sum_probs=62.8
Q ss_pred eeEEEeeceeEEEEeeEEEecCceeEEEeccCcceEEecEEEecccceEEEecCCCcccccCCcceEecceeeecccccE
Q psy675 214 VGLYVTDYAQGLYEDNEISRNALAGIWVKNYANPIMRRNHIHHGRDVGIFTFDNGHIFPISNSNPTIRRNEIYNGHQGGV 293 (1175)
Q Consensus 214 ~GI~v~~~s~~~ie~c~i~~~~~~gI~v~~~a~~~i~~~~I~~~~~~GI~~~~~g~g~~~~~s~~~i~~n~I~~~~~~GI 293 (1175)
.-+.+.......+++-++.+.....+.+....++.+++-+|...... ....||
T Consensus 93 ~~i~~~~~~~~~i~~i~~~nsp~w~~~~~~~~nv~i~~i~I~~~~~~---------------------------~NtDGi 145 (326)
T PF00295_consen 93 RLIRFNNCKNVTIEGITIRNSPFWHIHINDCDNVTISNITINNPANS---------------------------PNTDGI 145 (326)
T ss_dssp ESEEEEEEEEEEEESEEEES-SSESEEEESEEEEEEESEEEEEGGGC---------------------------TS--SE
T ss_pred ceeeeeeecceEEEeeEecCCCeeEEEEEccCCeEEcceEEEecCCC---------------------------CCcceE
Confidence 34555555567788888888877778777777777777777653310 134677
Q ss_pred EEEecCceEEEeeEEEecccccEEEecCC-CceEEceEEEcCccccEEE
Q psy675 294 YIFGEGRGLIEHNNIYGNALAGIQIRTSS-DPIVRHNKIHHGQHGGVYV 341 (1175)
Q Consensus 294 ~v~~~~~~~i~~n~I~~n~~~GI~i~~~s-~~~i~~n~i~~~~~~GI~v 341 (1175)
-+..+..++|++|.|.. +.+.|.+...+ +..++++.+..+ .||.+
T Consensus 146 d~~~s~nv~I~n~~i~~-gDD~Iaiks~~~ni~v~n~~~~~g--hGisi 191 (326)
T PF00295_consen 146 DIDSSKNVTIENCFIDN-GDDCIAIKSGSGNILVENCTCSGG--HGISI 191 (326)
T ss_dssp EEESEEEEEEESEEEES-SSESEEESSEECEEEEESEEEESS--SEEEE
T ss_pred EEEeeeEEEEEEeeccc-ccCcccccccccceEEEeEEEecc--cccee
Confidence 77776777777777753 56777776555 667777777543 44544
No 73
>PLN03010 polygalacturonase
Probab=94.71 E-value=11 Score=44.45 Aligned_cols=73 Identities=11% Similarity=0.085 Sum_probs=34.8
Q ss_pred EEEecCCCceEeeeEEEeCceeeEEEEeCCeeEEeeceeecc----ceecEEEecCCccEEeccEEeCCCCCcEEEEe
Q psy675 362 VWITTGSAPVLRRNRIHSGKQVGVYFYDNGHGKLEDNDIFNH----LYSGVQIRTGSNPIIRGNKIWGGQNGGVLVYN 435 (1175)
Q Consensus 362 I~v~~~s~~~i~~n~i~~~~~~GI~v~~~~~~~i~~n~I~~n----~~~GI~i~~~s~~~i~~n~i~~~~~~GI~l~~ 435 (1175)
+.+....+.++++-++.++....+.+......++++-.|... ...||.+..+.+++|+++.|... .++|.+..
T Consensus 160 l~~~~~~nv~v~gitl~nsp~~~i~i~~~~nv~i~~i~I~a~~~s~NTDGiDi~~s~nV~I~n~~I~~g-DDcIaiks 236 (409)
T PLN03010 160 LHISKCDNLTINGITSIDSPKNHISIKTCNYVAISKINILAPETSPNTDGIDISYSTNINIFDSTIQTG-DDCIAINS 236 (409)
T ss_pred EEEEeecCeEEeeeEEEcCCceEEEEeccccEEEEEEEEeCCCCCCCCCceeeeccceEEEEeeEEecC-CCeEEecC
Confidence 444444455555555555554455554444445544444431 12355555555555555555433 34554443
No 74
>PLN02155 polygalacturonase
Probab=94.61 E-value=2.7 Score=49.28 Aligned_cols=86 Identities=10% Similarity=0.034 Sum_probs=48.2
Q ss_pred cEEEEecceeEEeeeEEeecceeeEEEecCCCceEeeeEEEeCc----eeeEEEEeCCeeEEeeceeeccceecEEEecC
Q psy675 338 GVYVHEKGVGLIEENEVYANTLAGVWITTGSAPVLRRNRIHSGK----QVGVYFYDNGHGKLEDNDIFNHLYSGVQIRTG 413 (1175)
Q Consensus 338 GI~v~~~s~~~i~~n~i~~n~~~GI~v~~~s~~~i~~n~i~~~~----~~GI~v~~~~~~~i~~n~I~~n~~~GI~i~~~ 413 (1175)
.|.+......+|++-++.+....-+.+..+.++++++-+|.... ..||-+..+....|++|.|.... .+|.+..+
T Consensus 147 ~i~~~~~~nv~i~gitl~nSp~w~i~~~~~~nv~i~~v~I~~p~~~~NtDGidi~~s~nV~I~~~~I~~gD-DcIaik~g 225 (394)
T PLN02155 147 SISFNSAKDVIISGVKSMNSQVSHMTLNGCTNVVVRNVKLVAPGNSPNTDGFHVQFSTGVTFTGSTVQTGD-DCVAIGPG 225 (394)
T ss_pred ceeEEEeeeEEEECeEEEcCCCeEEEEECeeeEEEEEEEEECCCCCCCCCccccccceeEEEEeeEEecCC-ceEEcCCC
Confidence 35566666677777777777777777777777777777775421 23555544445555555544332 34444432
Q ss_pred C-ccEEeccEEe
Q psy675 414 S-NPIIRGNKIW 424 (1175)
Q Consensus 414 s-~~~i~~n~i~ 424 (1175)
+ ++.++++...
T Consensus 226 s~nI~I~n~~c~ 237 (394)
T PLN02155 226 TRNFLITKLACG 237 (394)
T ss_pred CceEEEEEEEEE
Confidence 2 3444444443
No 75
>PLN02188 polygalacturonase/glycoside hydrolase family protein
Probab=94.51 E-value=0.99 Score=53.09 Aligned_cols=126 Identities=13% Similarity=0.050 Sum_probs=71.8
Q ss_pred cEEEecCCccEEeccEEeCCCCCcEEEEeCceeeEEeeEEecc----cccCEEEeecCCceEeeeeEEcCCCccEEEEeC
Q psy675 407 GVQIRTGSNPIIRGNKIWGGQNGGVLVYNGGLGLLEQNEIFDN----AMAGVWIKTESNPTLKRNKIFDGRDGGICIFNG 482 (1175)
Q Consensus 407 GI~i~~~s~~~i~~n~i~~~~~~GI~l~~~~~~~i~~n~I~~n----~~~GI~i~~~s~~~i~~n~i~~~~~~GI~i~~~ 482 (1175)
-|++....+..|++-++.+.....+.+..+...++++-+|... ...||.+..+.+++|.++.|..
T Consensus 157 ~i~f~~~~nv~i~gitl~nSp~w~i~~~~~~~v~i~~v~I~~~~~spNtDGidi~~s~nV~I~n~~I~~----------- 225 (404)
T PLN02188 157 SVKFVNMNNTVVRGITSVNSKFFHIALVECRNFKGSGLKISAPSDSPNTDGIHIERSSGVYISDSRIGT----------- 225 (404)
T ss_pred EEEEEeeeeEEEeCeEEEcCCCeEEEEEccccEEEEEEEEeCCCCCCCCCcEeeeCcccEEEEeeEEeC-----------
Confidence 4455555667778888888777777777777777777777542 1235555555555555555443
Q ss_pred ceeEEeeceeeccccccEEEeec-CCceEeeeEEecCceeeEEEeCCCCccccccccceEEeeeeEeccccceEEEee
Q psy675 483 GKGVLEENDIFRNAQAGVLISTQ-SHPMLRRNRIFDGFAAGVEITNTPLSNLLINKENGFFEANDIHNNRIAGFEVKA 559 (1175)
Q Consensus 483 ~~~~i~~n~i~~n~~~GI~v~~~-~~~~i~~n~I~~~~~~GI~i~~~~~~~~~~~~~n~~v~~n~i~~n~~~Gi~v~~ 559 (1175)
..++|.+... .+.+++++... ..+||.+..-+....-....+++++++++.+.. .|++++.
T Consensus 226 -------------GDDcIaiksg~~nI~I~n~~c~--~ghGisiGSlG~~~~~~~V~nV~v~n~~~~~t~-~GiriKt 287 (404)
T PLN02188 226 -------------GDDCISIGQGNSQVTITRIRCG--PGHGISVGSLGRYPNEGDVTGLVVRDCTFTGTT-NGIRIKT 287 (404)
T ss_pred -------------CCcEEEEccCCccEEEEEEEEc--CCCcEEeCCCCCCCcCCcEEEEEEEeeEEECCC-cEEEEEE
Confidence 2334444322 24555555543 246666643111000112456888888888765 5888864
No 76
>PF12708 Pectate_lyase_3: Pectate lyase superfamily protein; PDB: 3EQN_A 3EQO_A 2PYG_A 2PYH_A 3SUC_A 3GQ7_A 3GQ9_A 3GQA_A 3GQ8_A 2VBE_A ....
Probab=94.23 E-value=0.49 Score=50.98 Aligned_cols=28 Identities=21% Similarity=0.513 Sum_probs=12.1
Q ss_pred cEEEecCCCceEEceEEEcCccccEEEE
Q psy675 315 GIQIRTSSDPIVRHNKIHHGQHGGVYVH 342 (1175)
Q Consensus 315 GI~i~~~s~~~i~~n~i~~~~~~GI~v~ 342 (1175)
|+.+....+..+.+++++++...|+++.
T Consensus 114 ~i~~~~~~~~~i~nv~~~~~~~~~i~~~ 141 (225)
T PF12708_consen 114 GIRFNSSQNVSISNVRIENSGGDGIYFN 141 (225)
T ss_dssp EEEETTEEEEEEEEEEEES-SS-SEEEE
T ss_pred EEEEEeCCeEEEEeEEEEccCccEEEEE
Confidence 3444333444455555555444555444
No 77
>PF00544 Pec_lyase_C: Pectate lyase; InterPro: IPR002022 Pectate lyase 4.2.2.2 from EC is an enzyme involved in the maceration and soft rotting of plant tissue. Pectate lyase is responsible for the eliminative cleavage of pectate, yielding oligosaccharides with 4-deoxy-alpha-D-mann-4-enuronosyl groups at their non-reducing ends. The protein is maximally expressed late in pollen development. It has been suggested that the pollen expression of pectate lyase genes might relate to a requirement for pectin degradation during pollen tube growth []. The structure and the folding kinetics of one member of this family, pectate lyase C (pelC)1 from Erwinia chrysanthemi has been investigated in some detail [,]. PelC contains a parallel beta-helix folding motif. The majority of the regular secondary structure is composed of parallel beta-sheets (about 30%). The individual strands of the sheets are connected by unordered loops of varying length. The backbone is then formed by a large helix composed of beta-sheets. There are two disulphide bonds in pelC and 12 proline residues. One of these prolines, Pro220, is involved in a cis peptide bond. he folding mechanism of pelC involves two slow phases that have been attributed to proline isomerization. Some of the proteins in this family are allergens. Allergies are hypersensitivity reactions of the immune system to specific substances called allergens (such as pollen, stings, drugs, or food) that, in most people, result in no symptoms. A nomenclature system has been established for antigens (allergens) that cause IgE-mediated atopic allergies in humans [WHO/IUIS Allergen Nomenclature Subcommittee King T.P., Hoffmann D., Loewenstein H., Marsh D.G., Platts-Mills T.A.E., Thomas W. Bull. World Health Organ. 72:797-806(1994)]. This nomenclature system is defined by a designation that is composed of the first three letters of the genus; a space; the first letter of the species name; a space and an arabic number. In the event that two species names have identical designations, they are discriminated from one another by adding one or more letters (as necessary) to each species designation. The allergens in this family include allergens with the following designations: Amb a 1, Amb a 2, Amb a 3, Cha o 1, Cup a 1, Cry j 1, Jun a 1. Two of the major allergens in the pollen of short ragweed (Ambrosia artemisiifolia) are Amb aI and Amb aII. The primary structure of Amb aII has been deduced and has been shown to share ~65% sequence identity with the Amb alpha I multigene family of allergens []. Members of the Amb aI/aII family include Nicotiana tabacum (Common tobacco) pectate lyase, which is similar to the deduced amino acid sequences of two pollen-specific pectate lyase genes identified in Solanum lycopersicum (Tomato) (Lycopersicon esculentum) []; Cry jI, a major allergenic glycoprotein of Cryptomeria japonica (Japanese cedar) - the most common pollen allergen in Japan []; and P56 and P59, which share sequence similarity with pectate lyases of plant pathogenic bacteria [].; PDB: 1O8M_A 1O8K_A 1O8E_A 1O8H_A 2PEC_A 1PLU_A 1O8I_A 1O8J_A 1O8D_A 1O8F_A ....
Probab=93.48 E-value=1.2 Score=47.14 Aligned_cols=116 Identities=12% Similarity=0.018 Sum_probs=57.2
Q ss_pred ceeEEEeeceeEEEEeeEEEec--------CceeEEEec-cCcceEEecEEEecccceEEEecCCCc-ccccCCcceEec
Q psy675 213 NVGLYVTDYAQGLYEDNEISRN--------ALAGIWVKN-YANPIMRRNHIHHGRDVGIFTFDNGHI-FPISNSNPTIRR 282 (1175)
Q Consensus 213 ~~GI~v~~~s~~~ie~c~i~~~--------~~~gI~v~~-~a~~~i~~~~I~~~~~~GI~~~~~g~g-~~~~~s~~~i~~ 282 (1175)
..+|-+.+.....+..|+|+.. .+..+.+.. +..+++..|.|.+.....+. ..... ......
T Consensus 75 ~Dai~i~~~~nVWIDH~sfs~~~~~~~~~~~Dg~idi~~~s~~vTiS~n~f~~~~k~~l~--G~~d~~~~~~~~------ 146 (200)
T PF00544_consen 75 GDAISIDNSSNVWIDHCSFSWGNFECNSDSSDGLIDIKKGSDNVTISNNIFDNHNKTMLI--GSSDSNSTDRGL------ 146 (200)
T ss_dssp --SEEEESTEEEEEES-EEEETTS-GGGSSSSSSEEEESSTEEEEEES-EEEEEEETCEE--SSCTTCGGGTTE------
T ss_pred CCeEEEEecccEEEeccEEeccccccccccCCceEEEEeCCceEEEEchhcccccccccc--CCCCCccccCCc------
Confidence 3455555555666777777766 555555553 34667888877765433221 00000 000011
Q ss_pred ceeeecccccEEEEecCceEEEeeEEEecccccEEEecCCCceEEceEEEcCccccEEEEecceeEEeeeEE
Q psy675 283 NEIYNGHQGGVYIFGEGRGLIEHNNIYGNALAGIQIRTSSDPIVRHNKIHHGQHGGVYVHEKGVGLIEENEV 354 (1175)
Q Consensus 283 n~I~~~~~~GI~v~~~~~~~i~~n~I~~n~~~GI~i~~~s~~~i~~n~i~~~~~~GI~v~~~s~~~i~~n~i 354 (1175)
+.++.+|.+.++....=.+. .....+.+|.+.+....+|.+...++..+|+|-|
T Consensus 147 -----------------~vT~hhN~f~~~~~R~P~~r-~G~~Hv~NN~~~~~~~y~i~~~~~a~v~~E~N~F 200 (200)
T PF00544_consen 147 -----------------RVTFHHNYFANTNSRNPRVR-FGYVHVYNNYYYNWSGYAIGARSGAQVLVENNYF 200 (200)
T ss_dssp -----------------EEEEES-EEEEEEE-TTEEC-SCEEEEES-EEEEECSESEEEETTEEEEEES-EE
T ss_pred -----------------eEEEEeEEECchhhCCCccc-ccEEEEEEeeeECCCCEEEEccCCeEEEEECcCC
Confidence 34445555544332111222 2345666777777677788877777777777754
No 78
>PLN02682 pectinesterase family protein
Probab=93.11 E-value=8.9 Score=44.25 Aligned_cols=85 Identities=13% Similarity=0.160 Sum_probs=62.7
Q ss_pred EEECCCcceEEeeeEEEeCCC-------CCeEEEEEccCccceEeeeeEecCcceeEEEeeceeEEEEeeEEEecCceeE
Q psy675 167 LEVGEHATPTIDHCIIRSTSV-------VGAAVCVSGVCASPTLRHCDISDCENVGLYVTDYAQGLYEDNEISRNALAGI 239 (1175)
Q Consensus 167 i~v~~~~~~~i~~c~i~~~~~-------~g~~v~v~g~~a~~~i~~c~i~~~~~~GI~v~~~s~~~ie~c~i~~~~~~gI 239 (1175)
+.+. ...+.+++..|+++.. .+.+|-+.-.+.+..+.+|+|.+.+ .-++. ...+..+++|.|.++-+
T Consensus 158 ~~v~-a~~F~a~nlTf~Nt~~~~~~g~~g~QAVAL~v~gDr~~fy~C~f~G~Q-DTLy~-~~gRqyf~~C~IeG~VD--- 231 (369)
T PLN02682 158 FAVN-SPYFIAKNITFKNTAPVPPPGALGKQAVALRISADTAAFYGCKFLGAQ-DTLYD-HLGRHYFKDCYIEGSVD--- 231 (369)
T ss_pred EEEE-CCCeEEEeeEEEcccccCCCCCCcccEEEEEecCCcEEEEcceEeccc-cceEE-CCCCEEEEeeEEccccc---
Confidence 4444 4678999999998641 1134444434468999999999987 44654 44678999999999876
Q ss_pred EEeccCcceEEecEEEec
Q psy675 240 WVKNYANPIMRRNHIHHG 257 (1175)
Q Consensus 240 ~v~~~a~~~i~~~~I~~~ 257 (1175)
.|.+.+...+.+|+|+..
T Consensus 232 FIFG~g~a~Fe~C~I~s~ 249 (369)
T PLN02682 232 FIFGNGLSLYEGCHLHAI 249 (369)
T ss_pred EEecCceEEEEccEEEEe
Confidence 467789999999999863
No 79
>PLN02480 Probable pectinesterase
Probab=92.54 E-value=1.2 Score=50.90 Aligned_cols=86 Identities=13% Similarity=0.066 Sum_probs=63.1
Q ss_pred EEEECCCcceEEeeeEEEeCCC-------CCeEEEEEccCccceEeeeeEecCcceeEEEeeceeEEEEeeEEEecCcee
Q psy675 166 CLEVGEHATPTIDHCIIRSTSV-------VGAAVCVSGVCASPTLRHCDISDCENVGLYVTDYAQGLYEDNEISRNALAG 238 (1175)
Q Consensus 166 ~i~v~~~~~~~i~~c~i~~~~~-------~g~~v~v~g~~a~~~i~~c~i~~~~~~GI~v~~~s~~~ie~c~i~~~~~~g 238 (1175)
.+.+. ...+++++++|++... .+.+|.+.-.+.+..+.+|+|.+.+ .-++. ...+..+++|.|.++-+
T Consensus 126 TvtV~-a~~f~a~nLTf~Nta~~g~~~~~~~QAVAl~v~gDra~f~~c~f~G~Q-DTLy~-~~gR~yf~~C~IeG~VD-- 200 (343)
T PLN02480 126 TFTVE-APHFVAFGISIRNDAPTGMAFTSENQSVAAFVGADKVAFYHCAFYSTH-NTLFD-YKGRHYYHSCYIQGSID-- 200 (343)
T ss_pred EEEEE-CCCEEEEeeEEEecCCCCCCCCCCCceEEEEecCCcEEEEeeEEeccc-ceeEe-CCCCEEEEeCEEEeeee--
Confidence 34444 4678999999999731 1245554333468999999999887 34554 45678999999999866
Q ss_pred EEEeccCcceEEecEEEec
Q psy675 239 IWVKNYANPIMRRNHIHHG 257 (1175)
Q Consensus 239 I~v~~~a~~~i~~~~I~~~ 257 (1175)
.|.+.+...+++|+|+..
T Consensus 201 -FIFG~g~a~fe~C~i~s~ 218 (343)
T PLN02480 201 -FIFGRGRSIFHNCEIFVI 218 (343)
T ss_pred -EEccceeEEEEccEEEEe
Confidence 467788999999999864
No 80
>PF08480 Disaggr_assoc: Disaggregatase related; InterPro: IPR013687 The members of this family are disaggregatases and several hypothetical proteins of the archaeal genus Methanosarcina. Disaggregatases cause aggregates to separate into single cells [] and contain parallel beta-helix repeats. Also see IPR010671 from INTERPRO.
Probab=92.50 E-value=0.96 Score=45.71 Aligned_cols=89 Identities=26% Similarity=0.295 Sum_probs=50.4
Q ss_pred cceEecceeeecccccEEEEecC---------ceEEEeeEEEecccccEEEecCCCceEEceEEEcCccccEEEEeccee
Q psy675 277 NPTIRRNEIYNGHQGGVYIFGEG---------RGLIEHNNIYGNALAGIQIRTSSDPIVRHNKIHHGQHGGVYVHEKGVG 347 (1175)
Q Consensus 277 ~~~i~~n~I~~~~~~GI~v~~~~---------~~~i~~n~I~~n~~~GI~i~~~s~~~i~~n~i~~~~~~GI~v~~~s~~ 347 (1175)
++.|-+|.|.+..+-||++.+.. .+.|.+|.|.+.+.. .+.. --.||...+--..
T Consensus 3 dIEIYnN~I~~T~g~GIWl~gy~~~ysk~~a~nVhIhhN~fY~tGtn-------~~~~---------wvGGIv~sGF~nt 66 (198)
T PF08480_consen 3 DIEIYNNTIYNTYGPGIWLFGYDGSYSKDSAKNVHIHHNIFYDTGTN-------PNID---------WVGGIVTSGFYNT 66 (198)
T ss_pred ceEEecceeecccCceEEEEecCCCCCccccccEEEECcEeecCCcC-------CCCc---------eeeeEEecccccc
Confidence 45677777887777888877541 234444444443210 0000 0146666555566
Q ss_pred EEeeeEEeecceeeEEEec----------CCCceEeeeEEEeCc
Q psy675 348 LIEENEVYANTLAGVWITT----------GSAPVLRRNRIHSGK 381 (1175)
Q Consensus 348 ~i~~n~i~~n~~~GI~v~~----------~s~~~i~~n~i~~~~ 381 (1175)
.||+|.|.++..+||.-+. .-.+++++|.|....
T Consensus 67 lIENNVfDG~y~aai~~~y~~~~~sp~gsgyttivRNNII~NT~ 110 (198)
T PF08480_consen 67 LIENNVFDGVYHAAIAQMYPDYDLSPKGSGYTTIVRNNIIVNTR 110 (198)
T ss_pred EEEeeeecccccceEEEEecccccCCCCCceEEEEEcceEeeee
Confidence 7777777777777776642 123466666666543
No 81
>PF08480 Disaggr_assoc: Disaggregatase related; InterPro: IPR013687 The members of this family are disaggregatases and several hypothetical proteins of the archaeal genus Methanosarcina. Disaggregatases cause aggregates to separate into single cells [] and contain parallel beta-helix repeats. Also see IPR010671 from INTERPRO.
Probab=91.15 E-value=1.4 Score=44.55 Aligned_cols=93 Identities=32% Similarity=0.436 Sum_probs=56.4
Q ss_pred EEEEeeEEEecCceeEEEecc----CcceEEecEEEecccceEEEecCCCcccccCCcceEecceeeecccccEEEEecC
Q psy675 224 GLYEDNEISRNALAGIWVKNY----ANPIMRRNHIHHGRDVGIFTFDNGHIFPISNSNPTIRRNEIYNGHQGGVYIFGEG 299 (1175)
Q Consensus 224 ~~ie~c~i~~~~~~gI~v~~~----a~~~i~~~~I~~~~~~GI~~~~~g~g~~~~~s~~~i~~n~I~~~~~~GI~v~~~~ 299 (1175)
..+-+++|.+...+|||+.+. ++-...+.+||++. | ++.| +. +.+ ....||...+--
T Consensus 4 IEIYnN~I~~T~g~GIWl~gy~~~ysk~~a~nVhIhhN~----f-Y~tG----tn---~~~-------~wvGGIv~sGF~ 64 (198)
T PF08480_consen 4 IEIYNNTIYNTYGPGIWLFGYDGSYSKDSAKNVHIHHNI----F-YDTG----TN---PNI-------DWVGGIVTSGFY 64 (198)
T ss_pred eEEecceeecccCceEEEEecCCCCCccccccEEEECcE----e-ecCC----cC---CCC-------ceeeeEEecccc
Confidence 456678888888999998754 12222344444432 0 0111 00 100 135688888777
Q ss_pred ceEEEeeEEEecccccEEEe----------cCCCceEEceEEEcCc
Q psy675 300 RGLIEHNNIYGNALAGIQIR----------TSSDPIVRHNKIHHGQ 335 (1175)
Q Consensus 300 ~~~i~~n~I~~n~~~GI~i~----------~~s~~~i~~n~i~~~~ 335 (1175)
..+||+|.|-++..+||.-. .+-..++++|.|.+..
T Consensus 65 ntlIENNVfDG~y~aai~~~y~~~~~sp~gsgyttivRNNII~NT~ 110 (198)
T PF08480_consen 65 NTLIENNVFDGVYHAAIAQMYPDYDLSPKGSGYTTIVRNNIIVNTR 110 (198)
T ss_pred ccEEEeeeecccccceEEEEecccccCCCCCceEEEEEcceEeeee
Confidence 88999999999988888653 1223467777776654
No 82
>COG3866 PelB Pectate lyase [Carbohydrate transport and metabolism]
Probab=90.90 E-value=14 Score=40.67 Aligned_cols=67 Identities=16% Similarity=0.172 Sum_probs=30.1
Q ss_pred cEEEecCCCceEEceEEEcCc-----cccEEEEe-cceeEEeeeEEeecc--------eeeEEEecCC-CceEeeeEEEe
Q psy675 315 GIQIRTSSDPIVRHNKIHHGQ-----HGGVYVHE-KGVGLIEENEVYANT--------LAGVWITTGS-APVLRRNRIHS 379 (1175)
Q Consensus 315 GI~i~~~s~~~i~~n~i~~~~-----~~GI~v~~-~s~~~i~~n~i~~n~--------~~GI~v~~~s-~~~i~~n~i~~ 379 (1175)
|+.+.+..+++|++-+|++.. ..+|-+.. ....-|.+|+|.+.. .-.+.+...+ ..+++.|.|++
T Consensus 118 gl~i~~a~NVIirNltf~~~~~~d~~~D~Isi~~~~~nIWIDH~tf~~~s~~~~~~h~DGl~Dik~~AnyITiS~n~fhd 197 (345)
T COG3866 118 GLKIRDAGNVIIRNLTFEGFYQGDPNYDAISIYDDGHNIWIDHNTFSGGSYNASGSHGDGLVDIKKDANYITISYNKFHD 197 (345)
T ss_pred eEEEEeCCcEEEEeeEEEeeccCCCCCCcEEeccCCeEEEEEeeEeccccccccccCCCccEEeccCCcEEEEEeeeeec
Confidence 334444444444444444332 23444422 222345555555521 1223444433 35677777776
Q ss_pred Cc
Q psy675 380 GK 381 (1175)
Q Consensus 380 ~~ 381 (1175)
..
T Consensus 198 h~ 199 (345)
T COG3866 198 HD 199 (345)
T ss_pred CC
Confidence 54
No 83
>PRK10531 acyl-CoA thioesterase; Provisional
Probab=90.48 E-value=4.7 Score=47.16 Aligned_cols=87 Identities=10% Similarity=0.073 Sum_probs=63.7
Q ss_pred EEECCCcceEEeeeEEEeCCC------CCeEEEEEccCccceEeeeeEecCcceeEEEe-----------eceeEEEEee
Q psy675 167 LEVGEHATPTIDHCIIRSTSV------VGAAVCVSGVCASPTLRHCDISDCENVGLYVT-----------DYAQGLYEDN 229 (1175)
Q Consensus 167 i~v~~~~~~~i~~c~i~~~~~------~g~~v~v~g~~a~~~i~~c~i~~~~~~GI~v~-----------~~s~~~ie~c 229 (1175)
+.+ ....+.+++..|++... .+.+|-+.-.+.+..+.+|+|.+.+ .-+++. ...+..+++|
T Consensus 201 v~v-~ad~F~a~NLTf~Ntag~~~~~~~~QAVALrv~GDra~fy~C~flG~Q-DTLy~~~~~~~~~~~~~~~gRqYf~~C 278 (422)
T PRK10531 201 FWS-QNNGLQLQNLTIENTLGDSVDAGNHPAVALRTDGDKVQIENVNILGRQ-DTFFVTNSGVQNRLETDRQPRTYVKNS 278 (422)
T ss_pred EEE-ECCCEEEEeeEEEeCCCCCCCCCcceeEEEEEcCCcEEEEeeEEeccc-ceeeeccccccccccccccccEEEEeC
Confidence 444 35789999999999742 1234444334468999999999886 567763 2347889999
Q ss_pred EEEecCceeEEEeccCcceEEecEEEecc
Q psy675 230 EISRNALAGIWVKNYANPIMRRNHIHHGR 258 (1175)
Q Consensus 230 ~i~~~~~~gI~v~~~a~~~i~~~~I~~~~ 258 (1175)
.|.+.-+ .|.+.+...+.+|+|+...
T Consensus 279 yIeG~VD---FIFG~g~AvFenC~I~s~~ 304 (422)
T PRK10531 279 YIEGDVD---FVFGRGAVVFDNTEFRVVN 304 (422)
T ss_pred EEeeccc---EEccCceEEEEcCEEEEec
Confidence 9999876 4667889999999998743
No 84
>PLN02773 pectinesterase
Probab=90.34 E-value=6.2 Score=44.67 Aligned_cols=86 Identities=15% Similarity=0.245 Sum_probs=64.1
Q ss_pred EEECCCcceEEeeeEEEeCCC--CCeEEEEEccCccceEeeeeEecCcceeEEEeeceeEEEEeeEEEecCceeEEEecc
Q psy675 167 LEVGEHATPTIDHCIIRSTSV--VGAAVCVSGVCASPTLRHCDISDCENVGLYVTDYAQGLYEDNEISRNALAGIWVKNY 244 (1175)
Q Consensus 167 i~v~~~~~~~i~~c~i~~~~~--~g~~v~v~g~~a~~~i~~c~i~~~~~~GI~v~~~s~~~ie~c~i~~~~~~gI~v~~~ 244 (1175)
+.+. ...+.+++.+|++... .+.+|.+.-.+.+..+.+|+|.+.+ .-+++. .....+++|.|.++-+ .|.+.
T Consensus 97 v~v~-a~~f~a~nlT~~Nt~~~~~gQAvAl~v~gDr~~f~~c~~~G~Q-DTL~~~-~gr~yf~~c~IeG~VD---FIFG~ 170 (317)
T PLN02773 97 VIVE-GEDFIAENITFENSAPEGSGQAVAIRVTADRCAFYNCRFLGWQ-DTLYLH-YGKQYLRDCYIEGSVD---FIFGN 170 (317)
T ss_pred EEEE-CCCeEEEeeEEEeCCCCCCCcEEEEEecCccEEEEccEeeccc-ceeEeC-CCCEEEEeeEEeeccc---EEeec
Confidence 4444 5689999999998743 2344444334468999999999876 556654 4678999999999876 46678
Q ss_pred CcceEEecEEEecc
Q psy675 245 ANPIMRRNHIHHGR 258 (1175)
Q Consensus 245 a~~~i~~~~I~~~~ 258 (1175)
+.+.+++|+|+...
T Consensus 171 g~a~Fe~c~i~s~~ 184 (317)
T PLN02773 171 STALLEHCHIHCKS 184 (317)
T ss_pred cEEEEEeeEEEEcc
Confidence 88999999998643
No 85
>PLN02634 probable pectinesterase
Probab=90.23 E-value=15 Score=42.33 Aligned_cols=85 Identities=12% Similarity=0.059 Sum_probs=62.1
Q ss_pred EEECCCcceEEeeeEEEeCCC-------CCeEEEEEccCccceEeeeeEecCcceeEEEeeceeEEEEeeEEEecCceeE
Q psy675 167 LEVGEHATPTIDHCIIRSTSV-------VGAAVCVSGVCASPTLRHCDISDCENVGLYVTDYAQGLYEDNEISRNALAGI 239 (1175)
Q Consensus 167 i~v~~~~~~~i~~c~i~~~~~-------~g~~v~v~g~~a~~~i~~c~i~~~~~~GI~v~~~s~~~ie~c~i~~~~~~gI 239 (1175)
+.+. +..+..++..|++... .+.+|.+.-.+.+..+.+|+|.+.+ .-++. ...+..+++|.|.++-+
T Consensus 144 v~V~-a~~F~a~niTf~Nta~~~~~g~~~~QAVAl~v~gDra~f~~C~f~G~Q-DTL~~-~~gR~yf~~CyIeG~VD--- 217 (359)
T PLN02634 144 VTVY-ANYFTARNISFKNTAPAPMPGMQGWQAVAFRISGDKAFFFGCGFYGAQ-DTLCD-DAGRHYFKECYIEGSID--- 217 (359)
T ss_pred EEEE-CCCeEEEeCeEEeCCccCCCCCCCCceEEEEecCCcEEEEEeEEeccc-ceeee-CCCCEEEEeeEEccccc---
Confidence 4443 4678889999998731 1344444334468999999999887 44554 45688999999999876
Q ss_pred EEeccCcceEEecEEEec
Q psy675 240 WVKNYANPIMRRNHIHHG 257 (1175)
Q Consensus 240 ~v~~~a~~~i~~~~I~~~ 257 (1175)
.|.+.+...+.+|+|+..
T Consensus 218 FIFG~g~a~Fe~C~I~s~ 235 (359)
T PLN02634 218 FIFGNGRSMYKDCELHSI 235 (359)
T ss_pred EEcCCceEEEeccEEEEe
Confidence 466788999999999864
No 86
>PLN02671 pectinesterase
Probab=89.89 E-value=25 Score=40.52 Aligned_cols=85 Identities=9% Similarity=0.010 Sum_probs=60.6
Q ss_pred EEECCCcceEEeeeEEEeCCC------CCeEEEEEccCccceEeeeeEecCcceeEEEeeceeEEEEeeEEEecCceeEE
Q psy675 167 LEVGEHATPTIDHCIIRSTSV------VGAAVCVSGVCASPTLRHCDISDCENVGLYVTDYAQGLYEDNEISRNALAGIW 240 (1175)
Q Consensus 167 i~v~~~~~~~i~~c~i~~~~~------~g~~v~v~g~~a~~~i~~c~i~~~~~~GI~v~~~s~~~ie~c~i~~~~~~gI~ 240 (1175)
+.+. +..+..++.+|++... .+.+|.+.-.+.+..+.+|+|.+.+ .-++. ......+++|.|.++-+ .
T Consensus 149 v~v~-a~~F~a~nitfeNt~~~~~g~~~~QAVALrv~gDra~f~~c~f~G~Q-DTLy~-~~gR~yf~~CyIeG~VD---F 222 (359)
T PLN02671 149 VTIE-SDYFCATGITFENTVVAEPGGQGMQAVALRISGDKAFFYKVRVLGAQ-DTLLD-ETGSHYFYQCYIQGSVD---F 222 (359)
T ss_pred EEEE-CCceEEEeeEEEcCCCCCCCCCCccEEEEEEcCccEEEEcceEeccc-cccEe-CCCcEEEEecEEEEecc---E
Confidence 4444 4677888888888621 1233433323458999999999886 44554 45678999999999876 3
Q ss_pred EeccCcceEEecEEEec
Q psy675 241 VKNYANPIMRRNHIHHG 257 (1175)
Q Consensus 241 v~~~a~~~i~~~~I~~~ 257 (1175)
|.+.+...+.+|+|+..
T Consensus 223 IFG~g~A~Fe~C~I~s~ 239 (359)
T PLN02671 223 IFGNAKSLYQDCVIQST 239 (359)
T ss_pred EecceeEEEeccEEEEe
Confidence 66788999999999864
No 87
>COG3866 PelB Pectate lyase [Carbohydrate transport and metabolism]
Probab=89.66 E-value=13 Score=40.89 Aligned_cols=69 Identities=16% Similarity=0.155 Sum_probs=35.5
Q ss_pred cEEEEeCceeEEeeceeeccc-----cccEEEe-ecCCceEeeeEEecCce-------ee-EEEeCCCCccccccccceE
Q psy675 476 GICIFNGGKGVLEENDIFRNA-----QAGVLIS-TQSHPMLRRNRIFDGFA-------AG-VEITNTPLSNLLINKENGF 541 (1175)
Q Consensus 476 GI~i~~~~~~~i~~n~i~~n~-----~~GI~v~-~~~~~~i~~n~I~~~~~-------~G-I~i~~~~~~~~~~~~~n~~ 541 (1175)
|+.+.+...+.|++-+|.+.. .++|.+. ++-+.-|.+|+++.... .| +.|..++. .++
T Consensus 118 gl~i~~a~NVIirNltf~~~~~~d~~~D~Isi~~~~~nIWIDH~tf~~~s~~~~~~h~DGl~Dik~~An--------yIT 189 (345)
T COG3866 118 GLKIRDAGNVIIRNLTFEGFYQGDPNYDAISIYDDGHNIWIDHNTFSGGSYNASGSHGDGLVDIKKDAN--------YIT 189 (345)
T ss_pred eEEEEeCCcEEEEeeEEEeeccCCCCCCcEEeccCCeEEEEEeeEeccccccccccCCCccEEeccCCc--------EEE
Confidence 344444334444444443322 3566663 33355666777766321 12 44444443 477
Q ss_pred EeeeeEecccc
Q psy675 542 FEANDIHNNRI 552 (1175)
Q Consensus 542 v~~n~i~~n~~ 552 (1175)
|+.|.+.+..+
T Consensus 190 iS~n~fhdh~K 200 (345)
T COG3866 190 ISYNKFHDHDK 200 (345)
T ss_pred EEeeeeecCCe
Confidence 88888777664
No 88
>smart00722 CASH Domain present in carbohydrate binding proteins and sugar hydrolses.
Probab=89.37 E-value=5.7 Score=39.17 Aligned_cols=62 Identities=24% Similarity=0.266 Sum_probs=27.7
Q ss_pred CcEEecceEEec---ccccEEEeCCceEEEEeeEEEcce---ecCEEEeccCCCeEeeeEEeecccccEE
Q psy675 608 NPTIRRNEIYNG---HQGGVYIFGEGRGLIEHNNIYGNA---LAGIQIRTSSDPIVRHNKIHHGQHGGVY 671 (1175)
Q Consensus 608 ~~~i~~N~I~~n---~~~GI~i~~~~~~~i~~N~i~~n~---~~GI~i~~ss~~~i~~N~I~~n~~~GI~ 671 (1175)
...+.+|.+.+. ...||++.......+.+|.+. . ..|+++.......+.+|.+......|++
T Consensus 77 ~~~i~~N~~~~~~~~~~~Gi~~~~~~~~~~~~N~i~--~~~~g~G~~~~~~~~~~~~~~~~~~~~~~Gi~ 144 (146)
T smart00722 77 KNLIIDNVTINGTEGSGAGIVVTAGSEGLFIGNRII--TNNDGDGNYLSDSSGGDLIGNRIYDNGRDGIA 144 (146)
T ss_pred ccEEEcceecCCCccceEEEEEECCccceEecCeEE--eecCCCCEEEeCCCCcEEEcceeEecCCCcEe
Confidence 344444444433 144444444444444444443 1 2455555555555555333333334444
No 89
>PLN02665 pectinesterase family protein
Probab=89.20 E-value=25 Score=40.65 Aligned_cols=82 Identities=12% Similarity=0.135 Sum_probs=61.2
Q ss_pred CcceEEeeeEEEeCCC------C-CeEEEEEccCccceEeeeeEecCcceeEEEeeceeEEEEeeEEEecCceeEEEecc
Q psy675 172 HATPTIDHCIIRSTSV------V-GAAVCVSGVCASPTLRHCDISDCENVGLYVTDYAQGLYEDNEISRNALAGIWVKNY 244 (1175)
Q Consensus 172 ~~~~~i~~c~i~~~~~------~-g~~v~v~g~~a~~~i~~c~i~~~~~~GI~v~~~s~~~ie~c~i~~~~~~gI~v~~~ 244 (1175)
...+..++..|++... . +.+|-+.-.+.+..+.+|+|.+.+ .-++. +..+..+++|.|.++-+ .|.+.
T Consensus 153 a~~F~a~nitf~Nta~~~~~~~~g~QAVAl~v~gDka~f~~C~f~G~Q-DTL~~-~~gr~yf~~CyIeG~VD---FIFG~ 227 (366)
T PLN02665 153 SDYFMAANIIIKNSAPRPDGKRKGAQAVAMRISGDKAAFYNCRFIGFQ-DTLCD-DKGRHFFKDCYIEGTVD---FIFGS 227 (366)
T ss_pred CCCeEEEeeEEEeCCCCcCCCCCCcceEEEEEcCCcEEEEcceecccc-ceeEe-CCCCEEEEeeEEeeccc---eeccc
Confidence 5788899999998742 1 134443333458999999999887 44554 45678999999999876 46678
Q ss_pred CcceEEecEEEecc
Q psy675 245 ANPIMRRNHIHHGR 258 (1175)
Q Consensus 245 a~~~i~~~~I~~~~ 258 (1175)
+...+.+|+|+...
T Consensus 228 g~a~fe~C~i~s~~ 241 (366)
T PLN02665 228 GKSLYLNTELHVVG 241 (366)
T ss_pred cceeeEccEEEEec
Confidence 89999999999754
No 90
>smart00722 CASH Domain present in carbohydrate binding proteins and sugar hydrolses.
Probab=88.58 E-value=5.1 Score=39.51 Aligned_cols=20 Identities=30% Similarity=0.561 Sum_probs=8.9
Q ss_pred eecEEEecCCccEEeccEEe
Q psy675 405 YSGVQIRTGSNPIIRGNKIW 424 (1175)
Q Consensus 405 ~~GI~i~~~s~~~i~~n~i~ 424 (1175)
..|+.+...+...+.+|++.
T Consensus 93 ~~Gi~~~~~~~~~~~~N~i~ 112 (146)
T smart00722 93 GAGIVVTAGSEGLFIGNRII 112 (146)
T ss_pred eEEEEEECCccceEecCeEE
Confidence 34444444444444444443
No 91
>PLN02432 putative pectinesterase
Probab=87.79 E-value=24 Score=39.62 Aligned_cols=85 Identities=19% Similarity=0.177 Sum_probs=62.3
Q ss_pred EEECCCcceEEeeeEEEeCCC-CCeEEEEEccCccceEeeeeEecCcceeEEEeeceeEEEEeeEEEecCceeEEEeccC
Q psy675 167 LEVGEHATPTIDHCIIRSTSV-VGAAVCVSGVCASPTLRHCDISDCENVGLYVTDYAQGLYEDNEISRNALAGIWVKNYA 245 (1175)
Q Consensus 167 i~v~~~~~~~i~~c~i~~~~~-~g~~v~v~g~~a~~~i~~c~i~~~~~~GI~v~~~s~~~ie~c~i~~~~~~gI~v~~~a 245 (1175)
+.+. +..+.+++..|++... .+.+|.+.-.+.+..+.+|+|.+.+ .-++. ...+..+++|.|.++-+ .|.+.+
T Consensus 89 ~~v~-a~~f~a~nlt~~Nt~g~~~QAvAl~v~gDr~~f~~c~~~G~Q-DTLy~-~~gr~yf~~c~I~G~VD---FIFG~g 162 (293)
T PLN02432 89 LSVL-ASDFVGRFLTIQNTFGSSGKAVALRVAGDRAAFYGCRILSYQ-DTLLD-DTGRHYYRNCYIEGATD---FICGNA 162 (293)
T ss_pred EEEE-CCCeEEEeeEEEeCCCCCCceEEEEEcCCcEEEEcceEeccc-ceeEE-CCCCEEEEeCEEEeccc---EEecCc
Confidence 4443 4678899999998632 2344444334468999999999876 45654 45678999999999876 466788
Q ss_pred cceEEecEEEec
Q psy675 246 NPIMRRNHIHHG 257 (1175)
Q Consensus 246 ~~~i~~~~I~~~ 257 (1175)
...+.+|+|+..
T Consensus 163 ~a~Fe~c~i~s~ 174 (293)
T PLN02432 163 ASLFEKCHLHSL 174 (293)
T ss_pred eEEEEeeEEEEe
Confidence 999999999863
No 92
>PF01095 Pectinesterase: Pectinesterase; InterPro: IPR000070 Pectinesterase 3.1.1.11 from EC (pectin methylesterase) catalyses the de-esterification of pectin into pectate and methanol. Pectin is one of the main components of the plant cell wall. In plants, pectinesterase plays an important role in cell wall metabolism during fruit ripening. In plant bacterial pathogens such as Erwinia carotovora and in fungal pathogens such as Aspergillus niger, pectinesterase is involved in maceration and soft-rotting of plant tissue. Plant pectinesterases are regulated by pectinesterase inhibitors, which are ineffective against microbial enzymes []. Prokaryotic and eukaryotic pectinesterases share a few regions of sequence similarity. The crystal structure of pectinesterase from Erwinia chrysanthemi revealed a beta-helix structure similar to that found in pectinolytic enzymes, though it is different from most structures of esterases []. The putative catalytic residues are in a similar location to those of the active site and substrate-binding cleft of pectate lyase.; GO: 0030599 pectinesterase activity, 0042545 cell wall modification, 0005618 cell wall; PDB: 1QJV_B 1XG2_A 1GQ8_A 2NTQ_A 2NTP_A 2NT9_A 2NT6_B 2NSP_B 2NTB_A 2NST_A ....
Probab=86.75 E-value=25 Score=39.73 Aligned_cols=84 Identities=18% Similarity=0.257 Sum_probs=55.0
Q ss_pred EEECCCcceEEeeeEEEeCCCC--C--eEEEEEccCccceEeeeeEecCcceeEEEeeceeEEEEeeEEEecCceeEEEe
Q psy675 167 LEVGEHATPTIDHCIIRSTSVV--G--AAVCVSGVCASPTLRHCDISDCENVGLYVTDYAQGLYEDNEISRNALAGIWVK 242 (1175)
Q Consensus 167 i~v~~~~~~~i~~c~i~~~~~~--g--~~v~v~g~~a~~~i~~c~i~~~~~~GI~v~~~s~~~ie~c~i~~~~~~gI~v~ 242 (1175)
+.+. ...+.+++..|++.... + .++.+. +.+..+.+|+|.+.+ .-+++. ..+..+.+|.|.++-+ .|.
T Consensus 82 ~~v~-a~~f~~~nit~~Nt~g~~~~qAvAl~~~--~d~~~f~~c~~~g~Q-DTL~~~-~~r~y~~~c~IeG~vD---FIf 153 (298)
T PF01095_consen 82 FSVN-ADDFTAENITFENTAGPSGGQAVALRVS--GDRAAFYNCRFLGYQ-DTLYAN-GGRQYFKNCYIEGNVD---FIF 153 (298)
T ss_dssp EEE--STT-EEEEEEEEEHCSGSG----SEEET---TSEEEEEEEEE-ST-T-EEE--SSEEEEES-EEEESEE---EEE
T ss_pred cccc-ccceeeeeeEEecCCCCcccceeeeeec--CCcEEEEEeEEcccc-ceeeec-cceeEEEeeEEEecCc---EEE
Confidence 4444 57889999999986321 1 344554 467999999999887 456654 4578899999999866 466
Q ss_pred ccCcceEEecEEEecc
Q psy675 243 NYANPIMRRNHIHHGR 258 (1175)
Q Consensus 243 ~~a~~~i~~~~I~~~~ 258 (1175)
+.+...+.+|+|+...
T Consensus 154 G~~~a~f~~c~i~~~~ 169 (298)
T PF01095_consen 154 GNGTAVFENCTIHSRR 169 (298)
T ss_dssp ESSEEEEES-EEEE--
T ss_pred CCeeEEeeeeEEEEec
Confidence 7888899999999743
No 93
>COG5434 PGU1 Endopygalactorunase [Cell envelope biogenesis, outer membrane]
Probab=86.72 E-value=7.4 Score=47.15 Aligned_cols=88 Identities=20% Similarity=0.132 Sum_probs=65.3
Q ss_pred ccEEEEecCceEEEeeEEEecccccEEEecCCCceEEceEEEcCcc---ccEEEEecceeEEeeeEEeecceeeEEEecC
Q psy675 291 GGVYIFGEGRGLIEHNNIYGNALAGIQIRTSSDPIVRHNKIHHGQH---GGVYVHEKGVGLIEENEVYANTLAGVWITTG 367 (1175)
Q Consensus 291 ~GI~v~~~~~~~i~~n~I~~n~~~GI~i~~~s~~~i~~n~i~~~~~---~GI~v~~~s~~~i~~n~i~~n~~~GI~v~~~ 367 (1175)
.-+.+.....+.+++-.|.....+++.....++.++++-+|..... .|+-....+.+.|++|.|.. +...|.+..+
T Consensus 239 ~~~~l~~c~NV~~~g~~i~ns~~~~~h~~~~~nl~~~nl~I~~~~~~NtDG~d~~sc~NvlI~~~~fdt-gDD~I~iksg 317 (542)
T COG5434 239 RTVVLKGCRNVLLEGLNIKNSPLWTVHPVDCDNLTFRNLTIDANRFDNTDGFDPGSCSNVLIEGCRFDT-GDDCIAIKSG 317 (542)
T ss_pred ceEEEeccceEEEeeeEecCCCcEEEeeecccCceecceEEECCCCCCCCccccccceeEEEeccEEec-CCceEEeecc
Confidence 3456667778888888888888888888888888888888866542 48888888888888888877 4577777654
Q ss_pred CC------------ceEeeeEEEe
Q psy675 368 SA------------PVLRRNRIHS 379 (1175)
Q Consensus 368 s~------------~~i~~n~i~~ 379 (1175)
+. ..+++|.+..
T Consensus 318 ~~~~~~~~~~~~~~i~i~~c~~~~ 341 (542)
T COG5434 318 AGLDGKKGYGPSRNIVIRNCYFSS 341 (542)
T ss_pred cCCcccccccccccEEEecceecc
Confidence 32 4566666663
No 94
>PLN02933 Probable pectinesterase/pectinesterase inhibitor
Probab=84.78 E-value=80 Score=38.55 Aligned_cols=85 Identities=13% Similarity=0.149 Sum_probs=62.7
Q ss_pred EEECCCcceEEeeeEEEeCCC--CCeEEEEEccCccceEeeeeEecCcceeEEEeeceeEEEEeeEEEecCceeEEEecc
Q psy675 167 LEVGEHATPTIDHCIIRSTSV--VGAAVCVSGVCASPTLRHCDISDCENVGLYVTDYAQGLYEDNEISRNALAGIWVKNY 244 (1175)
Q Consensus 167 i~v~~~~~~~i~~c~i~~~~~--~g~~v~v~g~~a~~~i~~c~i~~~~~~GI~v~~~s~~~ie~c~i~~~~~~gI~v~~~ 244 (1175)
+.+. +..+..++..|++... .+.+|.++-.+.+..+.+|+|.+.+ .-+++. ..+..+++|.|.++-+ .|.+.
T Consensus 300 ~~v~-a~~F~a~nitf~Ntag~~~~QAVAlrv~~Dra~fy~C~f~G~Q-DTLy~~-~~Rqyy~~C~IeGtVD---FIFG~ 373 (530)
T PLN02933 300 VGVK-GKGFIAKDISFVNYAGPAKHQAVALRSGSDHSAFYRCEFDGYQ-DTLYVH-SAKQFYRECDIYGTID---FIFGN 373 (530)
T ss_pred EEEE-CCCEEEEeeEEEECCCCCCCceEEEEEcCCcEEEEEeEEEecc-cccccC-CCceEEEeeEEecccc---eeccC
Confidence 4443 4678899999998742 1244544434568999999999887 456654 3567999999999876 46778
Q ss_pred CcceEEecEEEec
Q psy675 245 ANPIMRRNHIHHG 257 (1175)
Q Consensus 245 a~~~i~~~~I~~~ 257 (1175)
+...+.+|+|+.-
T Consensus 374 a~avFq~C~i~~~ 386 (530)
T PLN02933 374 AAVVFQNCSLYAR 386 (530)
T ss_pred ceEEEeccEEEEe
Confidence 9999999999864
No 95
>PLN02916 pectinesterase family protein
Probab=84.63 E-value=56 Score=39.52 Aligned_cols=85 Identities=14% Similarity=0.127 Sum_probs=62.4
Q ss_pred EEECCCcceEEeeeEEEeCCC--CCeEEEEEccCccceEeeeeEecCcceeEEEeeceeEEEEeeEEEecCceeEEEecc
Q psy675 167 LEVGEHATPTIDHCIIRSTSV--VGAAVCVSGVCASPTLRHCDISDCENVGLYVTDYAQGLYEDNEISRNALAGIWVKNY 244 (1175)
Q Consensus 167 i~v~~~~~~~i~~c~i~~~~~--~g~~v~v~g~~a~~~i~~c~i~~~~~~GI~v~~~s~~~ie~c~i~~~~~~gI~v~~~ 244 (1175)
+.+. +..+..++..|++... .+.+|.++-.+.+..+.+|+|.+.+ .-+++. ..+..+++|.|.++-+ .|.+.
T Consensus 272 ~~v~-~~~F~A~nitf~Ntag~~~~QAVALrv~~D~a~fy~C~f~G~Q-DTLy~~-~~Rqyy~~C~I~GtVD---FIFG~ 345 (502)
T PLN02916 272 FGVS-GDGFWARDITFENTAGPHKHQAVALRVSSDLSVFYRCSFKGYQ-DTLFVH-SLRQFYRDCHIYGTID---FIFGD 345 (502)
T ss_pred EEEE-CCCEEEEeeEEEeCCCCCCCceEEEEEcCCcEEEEeeeEeccC-ceeEeC-CCCEEEEecEEecccc---eeccC
Confidence 4443 4678899999998732 1234444323457999999999987 556654 3568999999999876 46788
Q ss_pred CcceEEecEEEec
Q psy675 245 ANPIMRRNHIHHG 257 (1175)
Q Consensus 245 a~~~i~~~~I~~~ 257 (1175)
+...+.+|+|+..
T Consensus 346 a~avFq~C~I~~~ 358 (502)
T PLN02916 346 AAVVFQNCDIFVR 358 (502)
T ss_pred ceEEEecCEEEEe
Confidence 9999999999864
No 96
>PLN02201 probable pectinesterase/pectinesterase inhibitor
Probab=84.11 E-value=99 Score=37.73 Aligned_cols=81 Identities=12% Similarity=0.158 Sum_probs=61.8
Q ss_pred CcceEEeeeEEEeCCC--CCeEEEEEccCccceEeeeeEecCcceeEEEeeceeEEEEeeEEEecCceeEEEeccCcceE
Q psy675 172 HATPTIDHCIIRSTSV--VGAAVCVSGVCASPTLRHCDISDCENVGLYVTDYAQGLYEDNEISRNALAGIWVKNYANPIM 249 (1175)
Q Consensus 172 ~~~~~i~~c~i~~~~~--~g~~v~v~g~~a~~~i~~c~i~~~~~~GI~v~~~s~~~ie~c~i~~~~~~gI~v~~~a~~~i 249 (1175)
+..+..++..|++... .+.+|.++-.+.+..+.+|+|.+.+ .-+++. ..+..+++|.|.++-+ +|.+.+...+
T Consensus 292 ~~~F~a~nitf~Ntag~~~~QAVAlrv~~D~~~fy~C~f~G~Q-DTLy~~-~~Rqyy~~C~I~GtVD---FIFG~a~avf 366 (520)
T PLN02201 292 GRGFIARDITFQNTAGPEKHQAVALRSDSDLSVFYRCAMRGYQ-DTLYTH-TMRQFYRECRITGTVD---FIFGDATAVF 366 (520)
T ss_pred CCCeEEEeeEEEECCCCCCCceEEEEEcCCcEEEEeeeeeccC-CeeEeC-CCCEEEEeeEEeeccc---EEecCceEEE
Confidence 4678899999998742 2344544434468999999999887 556654 4578999999999876 4678899999
Q ss_pred EecEEEec
Q psy675 250 RRNHIHHG 257 (1175)
Q Consensus 250 ~~~~I~~~ 257 (1175)
.+|+|+.-
T Consensus 367 ~~C~i~~~ 374 (520)
T PLN02201 367 QNCQILAK 374 (520)
T ss_pred EccEEEEe
Confidence 99999864
No 97
>PLN02995 Probable pectinesterase/pectinesterase inhibitor
Probab=83.73 E-value=75 Score=39.02 Aligned_cols=81 Identities=16% Similarity=0.161 Sum_probs=61.9
Q ss_pred CcceEEeeeEEEeCCC--CCeEEEEEccCccceEeeeeEecCcceeEEEeeceeEEEEeeEEEecCceeEEEeccCcceE
Q psy675 172 HATPTIDHCIIRSTSV--VGAAVCVSGVCASPTLRHCDISDCENVGLYVTDYAQGLYEDNEISRNALAGIWVKNYANPIM 249 (1175)
Q Consensus 172 ~~~~~i~~c~i~~~~~--~g~~v~v~g~~a~~~i~~c~i~~~~~~GI~v~~~s~~~ie~c~i~~~~~~gI~v~~~a~~~i 249 (1175)
+..+..++..|++... .+.+|-++-.+.+..+.+|+|.+.+ .-+++. ..+..+++|.|.+.-+ .|.+.+...+
T Consensus 311 ~~~F~a~nitf~Ntag~~~~QAVAlrv~~Dr~~f~~c~~~G~Q-DTLy~~-~~Rqyy~~C~I~GtVD---FIFG~a~avf 385 (539)
T PLN02995 311 GLHFIAKGITFRNTAGPAKGQAVALRSSSDLSIFYKCSIEGYQ-DTLMVH-SQRQFYRECYIYGTVD---FIFGNAAAVF 385 (539)
T ss_pred CCCeEEEeeEEEeCCCCCCCceEEEEEcCCceeEEcceEeccc-chhccC-CCceEEEeeEEeeccc---eEecccceEE
Confidence 4678899999998742 2345554434568999999999987 456654 3567999999999876 4677899999
Q ss_pred EecEEEec
Q psy675 250 RRNHIHHG 257 (1175)
Q Consensus 250 ~~~~I~~~ 257 (1175)
.+|+|+.-
T Consensus 386 ~~C~i~~~ 393 (539)
T PLN02995 386 QNCIILPR 393 (539)
T ss_pred eccEEEEe
Confidence 99999864
No 98
>PLN02497 probable pectinesterase
Probab=83.51 E-value=24 Score=40.25 Aligned_cols=81 Identities=9% Similarity=0.050 Sum_probs=60.0
Q ss_pred CcceEEeeeEEEeCCC---------CCeEEEEEccCccceEeeeeEecCcceeEEEeeceeEEEEeeEEEecCceeEEEe
Q psy675 172 HATPTIDHCIIRSTSV---------VGAAVCVSGVCASPTLRHCDISDCENVGLYVTDYAQGLYEDNEISRNALAGIWVK 242 (1175)
Q Consensus 172 ~~~~~i~~c~i~~~~~---------~g~~v~v~g~~a~~~i~~c~i~~~~~~GI~v~~~s~~~ie~c~i~~~~~~gI~v~ 242 (1175)
...+.+++.+|++... .+.+|.+.-.+.+..+.+|+|.+.+ .-++. ...+..+++|.|.++-+ .|.
T Consensus 114 a~~f~a~nlT~~Nt~~~~~~~~~~~~~QAVAl~v~gDr~~fy~C~f~G~Q-DTLy~-~~gRqyf~~C~IeG~VD---FIF 188 (331)
T PLN02497 114 ADNTVVKSITFANSYNFPSKGNKNPRVPAVAAMIGGDKSAFYSCGFAGVQ-DTLWD-SDGRHYFKRCTIQGAVD---FIF 188 (331)
T ss_pred cCCeEEEccEEEeCCCCccccCCCCCcceEEEEecCCcEEEEeeEEeccc-cceee-CCCcEEEEeCEEEeccc---EEc
Confidence 4678889999998632 1234444434468999999999987 44554 45678999999999876 467
Q ss_pred ccCcceEEecEEEec
Q psy675 243 NYANPIMRRNHIHHG 257 (1175)
Q Consensus 243 ~~a~~~i~~~~I~~~ 257 (1175)
+.+...+++|+|+..
T Consensus 189 G~g~a~Fe~C~I~s~ 203 (331)
T PLN02497 189 GSGQSIYESCVIQVL 203 (331)
T ss_pred cCceEEEEccEEEEe
Confidence 788999999999863
No 99
>PRK09752 adhesin; Provisional
Probab=83.29 E-value=23 Score=46.32 Aligned_cols=68 Identities=13% Similarity=0.136 Sum_probs=33.9
Q ss_pred cccEEEEecCceEEEeeEEEeccc----ccEEEecCC-----CceEEceEEEcCcc-----ccEEEEecceeEEeeeEEe
Q psy675 290 QGGVYIFGEGRGLIEHNNIYGNAL----AGIQIRTSS-----DPIVRHNKIHHGQH-----GGVYVHEKGVGLIEENEVY 355 (1175)
Q Consensus 290 ~~GI~v~~~~~~~i~~n~I~~n~~----~GI~i~~~s-----~~~i~~n~i~~~~~-----~GI~v~~~s~~~i~~n~i~ 355 (1175)
+..|+........+.++.|.+|.. -+|+..+.. .+.|.+++|.++.. .+||. ..+...|.+|.|.
T Consensus 112 GGAIya~~~~~itI~ns~F~nN~A~g~GGAIYa~G~n~~g~v~l~I~NS~F~nN~A~~G~GGAIYs-~ng~vtIsnS~F~ 190 (1250)
T PRK09752 112 GGAIFAKENSTLNLTDVIFSGNVAGGYGGAIYSSGTNDTGAVDLRVTNAMFRNNIANDGKGGAIYT-INNDVYLSDVIFD 190 (1250)
T ss_pred ccEEEecCcceeEEeeeEEEccccCCCCCEEEEcccCCCcceEEEEEecEEEccccccCCCCEEEE-ccCcEEEEeeEEe
Confidence 344444433344555555555542 124433211 24556666665532 23543 3455677777777
Q ss_pred ecc
Q psy675 356 ANT 358 (1175)
Q Consensus 356 ~n~ 358 (1175)
+|.
T Consensus 191 nN~ 193 (1250)
T PRK09752 191 NNQ 193 (1250)
T ss_pred CCc
Confidence 775
No 100
>PLN02176 putative pectinesterase
Probab=82.26 E-value=32 Score=39.48 Aligned_cols=81 Identities=14% Similarity=0.123 Sum_probs=60.1
Q ss_pred CcceEEeeeEEEeCCC--------CCeEEEEEccCccceEeeeeEecCcceeEEEeeceeEEEEeeEEEecCceeEEEec
Q psy675 172 HATPTIDHCIIRSTSV--------VGAAVCVSGVCASPTLRHCDISDCENVGLYVTDYAQGLYEDNEISRNALAGIWVKN 243 (1175)
Q Consensus 172 ~~~~~i~~c~i~~~~~--------~g~~v~v~g~~a~~~i~~c~i~~~~~~GI~v~~~s~~~ie~c~i~~~~~~gI~v~~ 243 (1175)
...+..++.+|++... .+.+|.+.-.+.+..+.+|+|.+.+ .-++. ...+..+++|.|.++-+ .|.+
T Consensus 121 a~~F~a~nlT~~Nt~~~~~~~~~~~~QAVAl~v~gDr~~f~~C~f~G~Q-DTLy~-~~gRqyf~~CyIeG~VD---FIFG 195 (340)
T PLN02176 121 ASNIIITGITFKNTYNIASNSSRPTKPAVAARMLGDKYAIIDSSFDGFQ-DTLFD-GKGRHYYKRCVISGGID---FIFG 195 (340)
T ss_pred CCCEEEEeeEEEeCCCccCCCCCCccceEEEEecCccEEEEccEEeccc-ceeEe-CCcCEEEEecEEEeccc---EEec
Confidence 4678889999988631 1244544434568999999999877 44554 45678999999999876 3667
Q ss_pred cCcceEEecEEEec
Q psy675 244 YANPIMRRNHIHHG 257 (1175)
Q Consensus 244 ~a~~~i~~~~I~~~ 257 (1175)
.+...+.+|+|+..
T Consensus 196 ~a~a~Fe~C~I~s~ 209 (340)
T PLN02176 196 YAQSIFEGCTLKLT 209 (340)
T ss_pred CceEEEeccEEEEe
Confidence 88999999999863
No 101
>PLN02170 probable pectinesterase/pectinesterase inhibitor
Probab=82.25 E-value=1.1e+02 Score=37.39 Aligned_cols=82 Identities=10% Similarity=0.168 Sum_probs=61.1
Q ss_pred CcceEEeeeEEEeCCCC--CeEEEEEccCccceEeeeeEecCcceeEEEeeceeEEEEeeEEEecCceeEEEeccCcceE
Q psy675 172 HATPTIDHCIIRSTSVV--GAAVCVSGVCASPTLRHCDISDCENVGLYVTDYAQGLYEDNEISRNALAGIWVKNYANPIM 249 (1175)
Q Consensus 172 ~~~~~i~~c~i~~~~~~--g~~v~v~g~~a~~~i~~c~i~~~~~~GI~v~~~s~~~ie~c~i~~~~~~gI~v~~~a~~~i 249 (1175)
+..+..++..|++.... +.+|.++-.+.+..+.+|+|.+.+ .-++.. ..+..+++|.|.++-+ .|.+.+...+
T Consensus 312 ~~~F~a~nitf~Ntag~~~~QAVALrv~gDr~~fy~C~f~GyQ-DTLy~~-~~Rqyy~~C~I~GtVD---FIFG~a~avF 386 (529)
T PLN02170 312 GDGFIARDITFVNSAGPNSEQAVALRVGSDKSVVYRCSVEGYQ-DSLYTH-SKRQFYRETDITGTVD---FIFGNSAVVF 386 (529)
T ss_pred cCCeEEEeeEEEecCCCCCCceEEEEecCCcEEEEeeeEeccC-CcceeC-CCCEEEEeeEEccccc---eecccceEEE
Confidence 46788999999987431 234444333457999999999887 456654 4567999999999876 4677899999
Q ss_pred EecEEEecc
Q psy675 250 RRNHIHHGR 258 (1175)
Q Consensus 250 ~~~~I~~~~ 258 (1175)
.+|+|+.-.
T Consensus 387 q~C~I~~~~ 395 (529)
T PLN02170 387 QSCNIAARK 395 (529)
T ss_pred eccEEEEec
Confidence 999998643
No 102
>PRK09752 adhesin; Provisional
Probab=81.94 E-value=41 Score=44.18 Aligned_cols=10 Identities=10% Similarity=0.205 Sum_probs=5.1
Q ss_pred EEeeeEEEec
Q psy675 1011 TVVHCEIHHG 1020 (1175)
Q Consensus 1011 ~i~~~~I~~n 1020 (1175)
.|.++.+.+|
T Consensus 156 ~I~NS~F~nN 165 (1250)
T PRK09752 156 RVTNAMFRNN 165 (1250)
T ss_pred EEEecEEEcc
Confidence 4445555555
No 103
>PLN02488 probable pectinesterase/pectinesterase inhibitor
Probab=81.34 E-value=73 Score=38.47 Aligned_cols=81 Identities=16% Similarity=0.148 Sum_probs=61.8
Q ss_pred CcceEEeeeEEEeCCC--CCeEEEEEccCccceEeeeeEecCcceeEEEeeceeEEEEeeEEEecCceeEEEeccCcceE
Q psy675 172 HATPTIDHCIIRSTSV--VGAAVCVSGVCASPTLRHCDISDCENVGLYVTDYAQGLYEDNEISRNALAGIWVKNYANPIM 249 (1175)
Q Consensus 172 ~~~~~i~~c~i~~~~~--~g~~v~v~g~~a~~~i~~c~i~~~~~~GI~v~~~s~~~ie~c~i~~~~~~gI~v~~~a~~~i 249 (1175)
+..+..++..|++... .+.||.++-.+.+..+.+|+|.+.+ .-+++. ..+..+++|.|.++-+ .|.+.+.+.+
T Consensus 283 g~gF~A~nitf~Ntag~~~~QAVALrv~~Dra~Fy~C~f~GyQ-DTLy~~-~~RqyyrdC~I~GtVD---FIFG~a~avF 357 (509)
T PLN02488 283 GDGFIGIDMCFRNTAGPAKGPAVALRVSGDMSVIYRCRIEGYQ-DALYPH-RDRQFYRECFITGTVD---FICGNAAAVF 357 (509)
T ss_pred cCCeEEEeeEEEECCCCCCCceEEEEecCCcEEEEcceeeccC-cceeeC-CCCEEEEeeEEeeccc---eEecceEEEE
Confidence 4678889999998743 2345555434568999999999887 556654 4578999999999876 4678899999
Q ss_pred EecEEEec
Q psy675 250 RRNHIHHG 257 (1175)
Q Consensus 250 ~~~~I~~~ 257 (1175)
.+|+|+.-
T Consensus 358 q~C~I~sr 365 (509)
T PLN02488 358 QFCQIVAR 365 (509)
T ss_pred EccEEEEe
Confidence 99999864
No 104
>PLN02304 probable pectinesterase
Probab=80.68 E-value=51 Score=38.30 Aligned_cols=81 Identities=10% Similarity=0.055 Sum_probs=60.0
Q ss_pred CcceEEeeeEEEeCCC-------CCeEEEEEccCccceEeeeeEecCcceeEEEeeceeEEEEeeEEEecCceeEEEecc
Q psy675 172 HATPTIDHCIIRSTSV-------VGAAVCVSGVCASPTLRHCDISDCENVGLYVTDYAQGLYEDNEISRNALAGIWVKNY 244 (1175)
Q Consensus 172 ~~~~~i~~c~i~~~~~-------~g~~v~v~g~~a~~~i~~c~i~~~~~~GI~v~~~s~~~ie~c~i~~~~~~gI~v~~~ 244 (1175)
+..+..++..|++... .+.||.+.-.+.+..+.+|+|.+.+ .-++. ...+..+++|.|.+.-+ .|.+.
T Consensus 161 a~~F~a~nITf~Nta~~~~~g~~~~QAVAL~v~gDra~fy~C~f~G~Q-DTLy~-~~gR~Yf~~CyIeG~VD---FIFG~ 235 (379)
T PLN02304 161 ASNFIAKNISFMNVAPIPKPGDVGAQAVAIRIAGDQAAFWGCGFFGAQ-DTLHD-DRGRHYFKDCYIQGSID---FIFGD 235 (379)
T ss_pred CCCeEEEeeEEEecCCCCCCCCCCccEEEEEecCCcEEEEeceEeccc-ceeEe-CCCCEEEEeeEEccccc---EEecc
Confidence 4678889999998741 1234444434468999999999987 44554 45678999999999876 46778
Q ss_pred CcceEEecEEEec
Q psy675 245 ANPIMRRNHIHHG 257 (1175)
Q Consensus 245 a~~~i~~~~I~~~ 257 (1175)
+...+++|+|+..
T Consensus 236 g~A~Fe~C~I~s~ 248 (379)
T PLN02304 236 ARSLYENCRLISM 248 (379)
T ss_pred ceEEEEccEEEEe
Confidence 8899999999863
No 105
>PLN02217 probable pectinesterase/pectinesterase inhibitor
Probab=79.87 E-value=57 Score=40.90 Aligned_cols=85 Identities=13% Similarity=0.148 Sum_probs=62.9
Q ss_pred EEECCCcceEEeeeEEEeCCC--CCeEEEEEccCccceEeeeeEecCcceeEEEeeceeEEEEeeEEEecCceeEEEecc
Q psy675 167 LEVGEHATPTIDHCIIRSTSV--VGAAVCVSGVCASPTLRHCDISDCENVGLYVTDYAQGLYEDNEISRNALAGIWVKNY 244 (1175)
Q Consensus 167 i~v~~~~~~~i~~c~i~~~~~--~g~~v~v~g~~a~~~i~~c~i~~~~~~GI~v~~~s~~~ie~c~i~~~~~~gI~v~~~ 244 (1175)
+.+. +..+..++..|++... .+.+|-++-.+.+..+.+|+|.+.+ .-+++. ..+..+++|.|.+.-+ +|.+.
T Consensus 332 ~~v~-g~~F~a~nitf~Ntag~~~~QAVAlrv~~Dra~fy~C~f~G~Q-DTLy~~-~~Rqyy~~C~I~GtVD---FIFG~ 405 (670)
T PLN02217 332 VAIV-GDHFIAKNIGFENTAGAIKHQAVAIRVLSDESIFYNCKFDGYQ-DTLYAH-SHRQFYRDCTISGTID---FLFGD 405 (670)
T ss_pred EEEE-CCCeEEEeeEEEeCCCCCCCceEEEEecCCcEEEEcceeeecc-chhccC-CCcEEEEeCEEEEecc---EEecC
Confidence 4443 4678999999998742 1244444434468999999999876 456654 4578999999999876 46688
Q ss_pred CcceEEecEEEec
Q psy675 245 ANPIMRRNHIHHG 257 (1175)
Q Consensus 245 a~~~i~~~~I~~~ 257 (1175)
+...|.+|+|+.-
T Consensus 406 a~avfq~C~I~~r 418 (670)
T PLN02217 406 AAAVFQNCTLLVR 418 (670)
T ss_pred ceEEEEccEEEEc
Confidence 9999999999864
No 106
>PLN02314 pectinesterase
Probab=76.83 E-value=1e+02 Score=38.33 Aligned_cols=81 Identities=14% Similarity=0.146 Sum_probs=60.4
Q ss_pred CcceEEeeeEEEeCCC--CCeEEEEEccCccceEeeeeEecCcceeEEEeeceeEEEEeeEEEecCceeEEEeccCcceE
Q psy675 172 HATPTIDHCIIRSTSV--VGAAVCVSGVCASPTLRHCDISDCENVGLYVTDYAQGLYEDNEISRNALAGIWVKNYANPIM 249 (1175)
Q Consensus 172 ~~~~~i~~c~i~~~~~--~g~~v~v~g~~a~~~i~~c~i~~~~~~GI~v~~~s~~~ie~c~i~~~~~~gI~v~~~a~~~i 249 (1175)
+..+..++..|++... .+.+|.++-.+.+..+.+|+|.+-+ .-+++. ..+..+++|.|.++-+ .|.+.+...|
T Consensus 364 ~~~F~a~~itf~Ntag~~~~QAvAlrv~~D~~~f~~c~~~G~Q-DTLy~~-~~rq~y~~C~I~GtvD---FIFG~a~avf 438 (586)
T PLN02314 364 GKGFIAKDMGFINTAGAAKHQAVAFRSGSDMSVFYQCSFDAFQ-DTLYAH-SNRQFYRDCDITGTID---FIFGNAAVVF 438 (586)
T ss_pred cCCeEEEeeEEEECCCCCCCceEEEEecCCcEEEEeeEEEecc-chheeC-CCCEEEEeeEEEeccc---eeccCceeee
Confidence 4678899999998732 1234444333457899999999876 456654 3567999999999876 4678899999
Q ss_pred EecEEEec
Q psy675 250 RRNHIHHG 257 (1175)
Q Consensus 250 ~~~~I~~~ 257 (1175)
.+|+|+.-
T Consensus 439 ~~c~i~~~ 446 (586)
T PLN02314 439 QNCNIQPR 446 (586)
T ss_pred eccEEEEe
Confidence 99999864
No 107
>PLN02745 Putative pectinesterase/pectinesterase inhibitor
Probab=75.96 E-value=49 Score=41.10 Aligned_cols=85 Identities=14% Similarity=0.104 Sum_probs=62.4
Q ss_pred EEECCCcceEEeeeEEEeCCC--CCeEEEEEccCccceEeeeeEecCcceeEEEeeceeEEEEeeEEEecCceeEEEecc
Q psy675 167 LEVGEHATPTIDHCIIRSTSV--VGAAVCVSGVCASPTLRHCDISDCENVGLYVTDYAQGLYEDNEISRNALAGIWVKNY 244 (1175)
Q Consensus 167 i~v~~~~~~~i~~c~i~~~~~--~g~~v~v~g~~a~~~i~~c~i~~~~~~GI~v~~~s~~~ie~c~i~~~~~~gI~v~~~ 244 (1175)
+.+. +..+..++..|++... .+.+|.+.-.+.+..+.+|+|.+.+ .-+|+. ..+..+++|.|.++-+ +|.+.
T Consensus 367 ~~v~-~~~F~a~nitf~Ntag~~~~QAVAl~v~~Dr~~f~~c~~~G~Q-DTLy~~-~~Rqyy~~C~I~GtVD---FIFG~ 440 (596)
T PLN02745 367 FVAL-GEGFMAKSMGFRNTAGPEKHQAVAIRVQSDRSIFLNCRFEGYQ-DTLYAQ-THRQFYRSCVITGTID---FIFGD 440 (596)
T ss_pred EEEE-cCCEEEEeeEEEECCCCCCCceEEEEEcCCcEEEEeeEEeecc-cccccC-CCcEEEEeeEEEeecc---EEecc
Confidence 4443 5778899999998743 1234444334468999999999887 556654 4578999999999876 56788
Q ss_pred CcceEEecEEEec
Q psy675 245 ANPIMRRNHIHHG 257 (1175)
Q Consensus 245 a~~~i~~~~I~~~ 257 (1175)
+...|.+|+|+--
T Consensus 441 a~avf~~C~i~~~ 453 (596)
T PLN02745 441 AAAIFQNCLIFVR 453 (596)
T ss_pred eeEEEEecEEEEe
Confidence 9999999999853
No 108
>PLN02713 Probable pectinesterase/pectinesterase inhibitor
Probab=74.17 E-value=56 Score=40.35 Aligned_cols=85 Identities=14% Similarity=0.160 Sum_probs=62.1
Q ss_pred EEECCCcceEEeeeEEEeCCC--CCeEEEEEccCccceEeeeeEecCcceeEEEeeceeEEEEeeEEEecCceeEEEecc
Q psy675 167 LEVGEHATPTIDHCIIRSTSV--VGAAVCVSGVCASPTLRHCDISDCENVGLYVTDYAQGLYEDNEISRNALAGIWVKNY 244 (1175)
Q Consensus 167 i~v~~~~~~~i~~c~i~~~~~--~g~~v~v~g~~a~~~i~~c~i~~~~~~GI~v~~~s~~~ie~c~i~~~~~~gI~v~~~ 244 (1175)
+.+. +..+..++..|++... .+.+|-++-.+.+..+.+|+|.+.+ .-+++. ..+..+++|.|.+.-+ .|.+.
T Consensus 335 ~~v~-~~~F~a~nitf~Ntag~~~~QAVAlrv~~D~~~fy~C~~~G~Q-DTLy~~-~~Rqyy~~C~I~GtVD---FIFG~ 408 (566)
T PLN02713 335 FAVV-GQNFVAVNITFRNTAGPAKHQAVALRSGADLSTFYSCSFEAYQ-DTLYTH-SLRQFYRECDIYGTVD---FIFGN 408 (566)
T ss_pred EEEE-CCCeEEEeeEEEeCCCCCCCceEEEEecCCcEEEEeeeeccCC-cceEEC-CCCEEEEeeEEecccc---eeccc
Confidence 4443 4789999999999732 1234444333457999999999887 556654 3567999999999876 46778
Q ss_pred CcceEEecEEEec
Q psy675 245 ANPIMRRNHIHHG 257 (1175)
Q Consensus 245 a~~~i~~~~I~~~ 257 (1175)
+.+.+.+|+|+..
T Consensus 409 a~avfq~C~i~~~ 421 (566)
T PLN02713 409 AAVVFQNCNLYPR 421 (566)
T ss_pred ceEEEeccEEEEe
Confidence 8999999999864
No 109
>PLN02990 Probable pectinesterase/pectinesterase inhibitor
Probab=71.74 E-value=1.1e+02 Score=37.95 Aligned_cols=85 Identities=15% Similarity=0.179 Sum_probs=62.3
Q ss_pred EEECCCcceEEeeeEEEeCCC--CCeEEEEEccCccceEeeeeEecCcceeEEEeeceeEEEEeeEEEecCceeEEEecc
Q psy675 167 LEVGEHATPTIDHCIIRSTSV--VGAAVCVSGVCASPTLRHCDISDCENVGLYVTDYAQGLYEDNEISRNALAGIWVKNY 244 (1175)
Q Consensus 167 i~v~~~~~~~i~~c~i~~~~~--~g~~v~v~g~~a~~~i~~c~i~~~~~~GI~v~~~s~~~ie~c~i~~~~~~gI~v~~~ 244 (1175)
+.+. +..+..++..|++... .+.+|.++-.+.+..+.+|+|.+.+ .-+++. ..+..+++|.|.++-+ .|.+.
T Consensus 342 ~~v~-~~~F~a~nitf~Ntag~~~~QAVAlrv~~D~~~f~~c~~~G~Q-DTLy~~-~~Rqyy~~C~I~GtVD---FIFG~ 415 (572)
T PLN02990 342 VAIN-GDHFTAKNIGFENTAGPEGHQAVALRVSADYAVFYNCQIDGYQ-DTLYVH-SHRQFFRDCTVSGTVD---FIFGD 415 (572)
T ss_pred EEEE-cCCEEEEeeEEEeCCCCCCCceEEEEEcCCcEEEEeeeEeccc-chhccC-CCcEEEEeeEEecccc---eEccC
Confidence 3443 4678999999998742 1244444433458999999999876 456654 3578999999999876 46688
Q ss_pred CcceEEecEEEec
Q psy675 245 ANPIMRRNHIHHG 257 (1175)
Q Consensus 245 a~~~i~~~~I~~~ 257 (1175)
+...+.+|+|+.-
T Consensus 416 a~avf~~C~i~~~ 428 (572)
T PLN02990 416 AKVVLQNCNIVVR 428 (572)
T ss_pred ceEEEEccEEEEe
Confidence 9999999999863
No 110
>PLN03043 Probable pectinesterase/pectinesterase inhibitor; Provisional
Probab=71.00 E-value=80 Score=38.83 Aligned_cols=81 Identities=16% Similarity=0.195 Sum_probs=60.1
Q ss_pred CcceEEeeeEEEeCCC--CCeEEEEEccCccceEeeeeEecCcceeEEEeeceeEEEEeeEEEecCceeEEEeccCcceE
Q psy675 172 HATPTIDHCIIRSTSV--VGAAVCVSGVCASPTLRHCDISDCENVGLYVTDYAQGLYEDNEISRNALAGIWVKNYANPIM 249 (1175)
Q Consensus 172 ~~~~~i~~c~i~~~~~--~g~~v~v~g~~a~~~i~~c~i~~~~~~GI~v~~~s~~~ie~c~i~~~~~~gI~v~~~a~~~i 249 (1175)
+..+..++..|++... .+.+|.++-.+.+..+.+|+|.+-+ .-+++. ..+..+++|.|.++-+ +|.+.+.+.|
T Consensus 312 ~~~F~a~~it~~Ntag~~~~QAvAlrv~~D~~~f~~C~~~gyQ-DTLy~~-~~rq~y~~c~I~GtVD---FIFG~a~avf 386 (538)
T PLN03043 312 GERFVAVDVTFRNTAGPEKHQAVALRNNADLSTFYRCSFEGYQ-DTLYVH-SLRQFYRECDIYGTVD---FIFGNAAAIF 386 (538)
T ss_pred CCCEEEEeeEEEECCCCCCCceEEEEEcCCcEEEEeeEEeccC-cccccC-CCcEEEEeeEEeeccc---eEeecceeee
Confidence 4678999999998742 2244544434457999999999886 446654 3567899999999876 4677889999
Q ss_pred EecEEEec
Q psy675 250 RRNHIHHG 257 (1175)
Q Consensus 250 ~~~~I~~~ 257 (1175)
.+|+|+.-
T Consensus 387 q~c~i~~r 394 (538)
T PLN03043 387 QNCNLYAR 394 (538)
T ss_pred eccEEEEe
Confidence 99999864
No 111
>PLN02484 probable pectinesterase/pectinesterase inhibitor
Probab=70.41 E-value=47 Score=41.22 Aligned_cols=81 Identities=14% Similarity=0.135 Sum_probs=60.8
Q ss_pred CcceEEeeeEEEeCCC--CCeEEEEEccCccceEeeeeEecCcceeEEEeeceeEEEEeeEEEecCceeEEEeccCcceE
Q psy675 172 HATPTIDHCIIRSTSV--VGAAVCVSGVCASPTLRHCDISDCENVGLYVTDYAQGLYEDNEISRNALAGIWVKNYANPIM 249 (1175)
Q Consensus 172 ~~~~~i~~c~i~~~~~--~g~~v~v~g~~a~~~i~~c~i~~~~~~GI~v~~~s~~~ie~c~i~~~~~~gI~v~~~a~~~i 249 (1175)
+..+..++..|++... .+.+|.++-.+.+..+.+|+|.+.+ .-+|+. ..+..+++|.|.++-+ .|.+.+...+
T Consensus 359 ~~~F~a~~itf~Ntag~~~~QAvAlrv~~D~~~fy~C~~~G~Q-DTLy~~-~~Rqyy~~C~I~GtVD---FIFG~a~avf 433 (587)
T PLN02484 359 GAGFIARDMTFENWAGPAKHQAVALRVGADHAVVYRCNIIGYQ-DTLYVH-SNRQFFRECDIYGTVD---FIFGNAAVVL 433 (587)
T ss_pred cCCEEEEeeEEEECCCCCCCceEEEEecCCcEEEEeeeEeccC-cccccC-CCcEEEEecEEEeccc---eecccceeEE
Confidence 4678899999998742 1234444333457999999999887 456654 3578999999999876 4678899999
Q ss_pred EecEEEec
Q psy675 250 RRNHIHHG 257 (1175)
Q Consensus 250 ~~~~I~~~ 257 (1175)
.+|+|+..
T Consensus 434 q~C~i~~~ 441 (587)
T PLN02484 434 QNCSIYAR 441 (587)
T ss_pred eccEEEEe
Confidence 99999864
No 112
>PLN02416 probable pectinesterase/pectinesterase inhibitor
Probab=70.00 E-value=62 Score=39.75 Aligned_cols=85 Identities=19% Similarity=0.185 Sum_probs=62.0
Q ss_pred EEECCCcceEEeeeEEEeCCC--CCeEEEEEccCccceEeeeeEecCcceeEEEeeceeEEEEeeEEEecCceeEEEecc
Q psy675 167 LEVGEHATPTIDHCIIRSTSV--VGAAVCVSGVCASPTLRHCDISDCENVGLYVTDYAQGLYEDNEISRNALAGIWVKNY 244 (1175)
Q Consensus 167 i~v~~~~~~~i~~c~i~~~~~--~g~~v~v~g~~a~~~i~~c~i~~~~~~GI~v~~~s~~~ie~c~i~~~~~~gI~v~~~ 244 (1175)
+.+. +..+..++-.|++... .+.+|.++-.+.+..+.+|+|.+.+ .-+++. ..+..+++|.|.+.-+ .|.+.
T Consensus 312 ~~v~-~~~F~a~nitf~Ntag~~~~QAVAl~v~~D~~~fy~c~~~G~Q-DTLy~~-~~Rqyy~~C~I~GtVD---FIFG~ 385 (541)
T PLN02416 312 LAVS-GEGFLARDITIENTAGPEKHQAVALRVNADLVALYRCTINGYQ-DTLYVH-SFRQFYRECDIYGTID---YIFGN 385 (541)
T ss_pred EEEE-CCCeEEEeeEEEECCCCCCCceEEEEEcCccEEEEcceEeccc-chhccC-CCceEEEeeEEeeccc---eeecc
Confidence 4444 4778899999998743 1244444434457999999999886 445554 3567999999999876 46778
Q ss_pred CcceEEecEEEec
Q psy675 245 ANPIMRRNHIHHG 257 (1175)
Q Consensus 245 a~~~i~~~~I~~~ 257 (1175)
+.+.+.+|+|+.-
T Consensus 386 a~avfq~c~i~~~ 398 (541)
T PLN02416 386 AAVVFQACNIVSK 398 (541)
T ss_pred ceEEEeccEEEEe
Confidence 9999999999864
No 113
>PLN02301 pectinesterase/pectinesterase inhibitor
Probab=69.27 E-value=89 Score=38.44 Aligned_cols=81 Identities=15% Similarity=0.178 Sum_probs=59.2
Q ss_pred CcceEEeeeEEEeCCC--CCeEEEEEccCccceEeeeeEecCcceeEEEeeceeEEEEeeEEEecCceeEEEeccCcceE
Q psy675 172 HATPTIDHCIIRSTSV--VGAAVCVSGVCASPTLRHCDISDCENVGLYVTDYAQGLYEDNEISRNALAGIWVKNYANPIM 249 (1175)
Q Consensus 172 ~~~~~i~~c~i~~~~~--~g~~v~v~g~~a~~~i~~c~i~~~~~~GI~v~~~s~~~ie~c~i~~~~~~gI~v~~~a~~~i 249 (1175)
+..+..++-.|++... .+.+|.++-.+.+..+.+|+|.+-+ .-+++. ..+..+++|.|.+.-+ .|.+.+...+
T Consensus 322 ~~~F~a~nitf~Ntag~~~~QAVAlrv~~D~~~fy~C~~~G~Q-DTLy~~-~~Rqyy~~C~I~GtVD---FIFG~a~avf 396 (548)
T PLN02301 322 GDGFIAQDIWFQNTAGPEKHQAVALRVSADQAVINRCRIDAYQ-DTLYAH-SLRQFYRDSYITGTVD---FIFGNAAVVF 396 (548)
T ss_pred CCceEEEeeEEEECCCCCCCceEEEEecCCcEEEEeeeeeecc-ccceec-CCcEEEEeeEEEeccc---eecccceeEE
Confidence 4678888999998632 1234444333457999999999887 556654 3567899999999876 4677888999
Q ss_pred EecEEEec
Q psy675 250 RRNHIHHG 257 (1175)
Q Consensus 250 ~~~~I~~~ 257 (1175)
.+|+|+--
T Consensus 397 q~c~i~~~ 404 (548)
T PLN02301 397 QNCKIVAR 404 (548)
T ss_pred eccEEEEe
Confidence 99999864
No 114
>PLN02708 Probable pectinesterase/pectinesterase inhibitor
Probab=68.72 E-value=64 Score=39.79 Aligned_cols=80 Identities=14% Similarity=0.158 Sum_probs=60.3
Q ss_pred CcceEEeeeEEEeCCCC--CeEEEEEccCccceEeeeeEecCcceeEEEeeceeEEEEeeEEEecCceeEEEeccCcceE
Q psy675 172 HATPTIDHCIIRSTSVV--GAAVCVSGVCASPTLRHCDISDCENVGLYVTDYAQGLYEDNEISRNALAGIWVKNYANPIM 249 (1175)
Q Consensus 172 ~~~~~i~~c~i~~~~~~--g~~v~v~g~~a~~~i~~c~i~~~~~~GI~v~~~s~~~ie~c~i~~~~~~gI~v~~~a~~~i 249 (1175)
+..+.+++-.|++.... +.+|.+.-.+.+..+.+|+|.+-+ .-+|+. ..+..+++|.|.++-+ .|.+.+.+.|
T Consensus 329 ~~~f~a~~it~~Ntag~~~~QAVAlrv~~D~~~f~~c~~~G~Q-DTLy~~-~~rq~y~~C~I~GtVD---FIFG~a~avf 403 (553)
T PLN02708 329 GDGFMARDLTIQNTAGPDAHQAVAFRSDSDLSVIENCEFLGNQ-DTLYAH-SLRQFYKSCRIQGNVD---FIFGNSAAVF 403 (553)
T ss_pred cCCeEEEeeEEEcCCCCCCCceEEEEecCCcEEEEeeeeeecc-ccceeC-CCceEEEeeEEeecCC---EEecCceEEE
Confidence 46788999999987431 245554434568999999999886 556664 3567899999999876 4677889999
Q ss_pred EecEEEe
Q psy675 250 RRNHIHH 256 (1175)
Q Consensus 250 ~~~~I~~ 256 (1175)
.+|+|+-
T Consensus 404 q~c~i~~ 410 (553)
T PLN02708 404 QDCAILI 410 (553)
T ss_pred EccEEEE
Confidence 9999985
No 115
>PLN02506 putative pectinesterase/pectinesterase inhibitor
Probab=67.84 E-value=90 Score=38.30 Aligned_cols=81 Identities=14% Similarity=0.163 Sum_probs=60.1
Q ss_pred CcceEEeeeEEEeCCC--CCeEEEEEccCccceEeeeeEecCcceeEEEeeceeEEEEeeEEEecCceeEEEeccCcceE
Q psy675 172 HATPTIDHCIIRSTSV--VGAAVCVSGVCASPTLRHCDISDCENVGLYVTDYAQGLYEDNEISRNALAGIWVKNYANPIM 249 (1175)
Q Consensus 172 ~~~~~i~~c~i~~~~~--~g~~v~v~g~~a~~~i~~c~i~~~~~~GI~v~~~s~~~ie~c~i~~~~~~gI~v~~~a~~~i 249 (1175)
+..+..++..|++... .+.+|.+.-.+.+..+.+|+|.+.+ .-+++. ..+..+++|.|.++-+ .|.+.+...+
T Consensus 318 ~~~F~a~nit~~Ntag~~~~QAVAl~v~~D~~~fy~C~~~G~Q-DTLy~~-~~rqyy~~C~I~GtVD---FIFG~a~avf 392 (537)
T PLN02506 318 GRGFIARDITFRNTAGPQNHQAVALRVDSDQSAFYRCSMEGYQ-DTLYAH-SLRQFYRECEIYGTID---FIFGNGAAVL 392 (537)
T ss_pred cCCeEEEeeEEEeCCCCCCCceEEEEecCCcEEEEcceeeccc-ccceec-CCceEEEeeEEecccc---eEccCceeEE
Confidence 4678899999998742 1234444334468999999999876 456654 3567999999999876 4677889999
Q ss_pred EecEEEec
Q psy675 250 RRNHIHHG 257 (1175)
Q Consensus 250 ~~~~I~~~ 257 (1175)
.+|+|+.-
T Consensus 393 q~C~i~~r 400 (537)
T PLN02506 393 QNCKIYTR 400 (537)
T ss_pred eccEEEEc
Confidence 99999864
No 116
>PF03718 Glyco_hydro_49: Glycosyl hydrolase family 49; InterPro: IPR005192 O-Glycosyl hydrolases 3.2.1. from EC are a widespread group of enzymes that hydrolyse the glycosidic bond between two or more carbohydrates, or between a carbohydrate and a non-carbohydrate moiety. A classification system for glycosyl hydrolases, based on sequence similarity, has led to the definition of 85 different families [, ]. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. This is a family of dextranase (3.2.1.11 from EC) and isopullulanase (3.2.1.57 from EC) which are all members of glycoside hydrolase family 49 (GH49 from CAZY). Dextranase hydrolyses alpha-1,6-glycosidic bonds in dextran polymers.; GO: 0004553 hydrolase activity, hydrolyzing O-glycosyl compounds; PDB: 1X0C_A 1WMR_A 2Z8G_B 1OGM_X 1OGO_X.
Probab=66.76 E-value=2.1e+02 Score=34.58 Aligned_cols=110 Identities=15% Similarity=0.079 Sum_probs=58.7
Q ss_pred ECCCcceEEeeeEEEeCCCCCeEEEEEccCc---cceEeeeeEecC---cceeEEEeeceeEEEEeeEEEecCceeEEEe
Q psy675 169 VGEHATPTIDHCIIRSTSVVGAAVCVSGVCA---SPTLRHCDISDC---ENVGLYVTDYAQGLYEDNEISRNALAGIWVK 242 (1175)
Q Consensus 169 v~~~~~~~i~~c~i~~~~~~g~~v~v~g~~a---~~~i~~c~i~~~---~~~GI~v~~~s~~~ie~c~i~~~~~~gI~v~ 242 (1175)
+.+...+.++..+|..... .++.+.+... ++.+++-+.-+. ...||-+.. ..+++||.|..+++ +|.+.
T Consensus 325 ~~g~q~~~~~GiTI~~pP~--~Sm~l~g~~~~~~~~~i~nyKqVGaW~~qtDGi~ly~--nS~i~dcF~h~nDD-~iKlY 399 (582)
T PF03718_consen 325 ANGGQTLTCEGITINDPPF--HSMDLYGNENDKFSMNISNYKQVGAWYFQTDGIELYP--NSTIRDCFIHVNDD-AIKLY 399 (582)
T ss_dssp -SSSEEEEEES-EEE--SS---SEEEESSSGGGEEEEEEEEEEE---CTT----B--T--T-EEEEEEEEESS--SEE--
T ss_pred cCCcceEEEEeeEecCCCc--ceEEecCCccccccceeeceeeeeeEEeccCCccccC--CCeeeeeEEEecCc-hhhee
Confidence 3445678899999988754 6678876532 345555555542 235666653 45678998887764 66555
Q ss_pred ccCcceEEecEEEecccceEEEecCCCccccc-CCcceEecceeeec
Q psy675 243 NYANPIMRRNHIHHGRDVGIFTFDNGHIFPIS-NSNPTIRRNEIYNG 288 (1175)
Q Consensus 243 ~~a~~~i~~~~I~~~~~~GI~~~~~g~g~~~~-~s~~~i~~n~I~~~ 288 (1175)
.+.+.+++|++-......++- +||... -+++.+++..|.+.
T Consensus 400 -hS~v~v~~~ViWk~~Ngpiiq----~GW~pr~isnv~veni~IIh~ 441 (582)
T PF03718_consen 400 -HSNVSVSNTVIWKNENGPIIQ----WGWTPRNISNVSVENIDIIHN 441 (582)
T ss_dssp -STTEEEEEEEEEE-SSS-SEE------CS---EEEEEEEEEEEEE-
T ss_pred -ecCcceeeeEEEecCCCCeEE----eeccccccCceEEeeeEEEee
Confidence 588999999999877555542 234432 24667777766654
No 117
>PLN02468 putative pectinesterase/pectinesterase inhibitor
Probab=66.47 E-value=1.4e+02 Score=37.13 Aligned_cols=85 Identities=13% Similarity=0.133 Sum_probs=61.0
Q ss_pred EEECCCcceEEeeeEEEeCCCC--CeEEEEEccCccceEeeeeEecCcceeEEEeeceeEEEEeeEEEecCceeEEEecc
Q psy675 167 LEVGEHATPTIDHCIIRSTSVV--GAAVCVSGVCASPTLRHCDISDCENVGLYVTDYAQGLYEDNEISRNALAGIWVKNY 244 (1175)
Q Consensus 167 i~v~~~~~~~i~~c~i~~~~~~--g~~v~v~g~~a~~~i~~c~i~~~~~~GI~v~~~s~~~ie~c~i~~~~~~gI~v~~~ 244 (1175)
+.+. +..+.+++..|++.... +.+|.+.-.+.+..+.+|+|.+.+ .-+|+. ..+..+++|.|.++-+ .|.+.
T Consensus 340 ~~v~-~~~f~a~~itf~Ntag~~~~QAVAl~v~~D~~~fy~c~~~G~Q-DTLy~~-~~rq~y~~C~I~GtvD---FIFG~ 413 (565)
T PLN02468 340 FAVF-GKGFMARDMGFRNTAGPIKHQAVALMSSADLSVFYRCTMDAFQ-DTLYAH-AQRQFYRECNIYGTVD---FIFGN 413 (565)
T ss_pred eeEE-CCCeEEEEEEEEeCCCCCCCceEEEEEcCCcEEEEEeEEEecc-chhccC-CCceEEEeeEEecccc---eeecc
Confidence 4443 46789999999987421 234433323457899999999876 556654 3567899999999876 46788
Q ss_pred CcceEEecEEEec
Q psy675 245 ANPIMRRNHIHHG 257 (1175)
Q Consensus 245 a~~~i~~~~I~~~ 257 (1175)
+.+.|.+|+|+.-
T Consensus 414 a~avfq~c~i~~~ 426 (565)
T PLN02468 414 SAVVFQNCNILPR 426 (565)
T ss_pred ceEEEeccEEEEe
Confidence 8999999999753
No 118
>PLN02698 Probable pectinesterase/pectinesterase inhibitor
Probab=62.76 E-value=59 Score=39.50 Aligned_cols=81 Identities=12% Similarity=0.161 Sum_probs=60.2
Q ss_pred CcceEEeeeEEEeCCCC--CeEEEEEccCccceEeeeeEecCcceeEEEeeceeEEEEeeEEEecCceeEEEeccCcceE
Q psy675 172 HATPTIDHCIIRSTSVV--GAAVCVSGVCASPTLRHCDISDCENVGLYVTDYAQGLYEDNEISRNALAGIWVKNYANPIM 249 (1175)
Q Consensus 172 ~~~~~i~~c~i~~~~~~--g~~v~v~g~~a~~~i~~c~i~~~~~~GI~v~~~s~~~ie~c~i~~~~~~gI~v~~~a~~~i 249 (1175)
+..+..++..|++.... ..+|-++-.+.+..+.+|+|.+.+ .-+++.. .+..+.+|.|.++-+ +|.+.+...|
T Consensus 269 ~~~F~a~nitf~Ntag~~~~QAvAl~v~~D~~~fy~c~~~G~Q-DTLy~~~-~rqyy~~C~I~G~vD---FIFG~a~avf 343 (497)
T PLN02698 269 GDGFIARDIGFKNAAGPKGEQAIALSITSDHSVLYRCSIAGYQ-DTLYAAA-LRQFYRECDIYGTID---FIFGNAAAVF 343 (497)
T ss_pred CCCeEEEeeEEEECCCCCCCceEEEEecCCcEEEEcceeeccc-chheeCC-CcEEEEeeEEEeccc---eEecccceee
Confidence 46788999999987431 134444334468999999999887 5566543 467999999999876 4667889999
Q ss_pred EecEEEec
Q psy675 250 RRNHIHHG 257 (1175)
Q Consensus 250 ~~~~I~~~ 257 (1175)
.+|+|+..
T Consensus 344 ~~C~i~~~ 351 (497)
T PLN02698 344 QNCYLFLR 351 (497)
T ss_pred cccEEEEe
Confidence 99999854
No 119
>PLN02313 Pectinesterase/pectinesterase inhibitor
Probab=62.38 E-value=85 Score=39.06 Aligned_cols=81 Identities=14% Similarity=0.165 Sum_probs=58.9
Q ss_pred CcceEEeeeEEEeCCC--CCeEEEEEccCccceEeeeeEecCcceeEEEeeceeEEEEeeEEEecCceeEEEeccCcceE
Q psy675 172 HATPTIDHCIIRSTSV--VGAAVCVSGVCASPTLRHCDISDCENVGLYVTDYAQGLYEDNEISRNALAGIWVKNYANPIM 249 (1175)
Q Consensus 172 ~~~~~i~~c~i~~~~~--~g~~v~v~g~~a~~~i~~c~i~~~~~~GI~v~~~s~~~ie~c~i~~~~~~gI~v~~~a~~~i 249 (1175)
+..+..++..|++... .+.+|.++-.+.+..+.+|+|.+-+ .-+++.. .+..+++|.|.++-+ .|.+.+.+.|
T Consensus 361 ~~~F~a~~itf~Ntag~~~~QAvAlrv~~D~~~fy~C~~~g~Q-DTLy~~~-~rq~y~~c~I~GtvD---FIFG~a~avf 435 (587)
T PLN02313 361 GERFLARDITFQNTAGPSKHQAVALRVGSDFSAFYQCDMFAYQ-DTLYVHS-NRQFFVKCHITGTVD---FIFGNAAAVL 435 (587)
T ss_pred CCCeEEEeeEEEeCCCCCCCceEEEEecCCcEEEEeeeEeccc-chhccCC-CcEEEEeeEEeeccc---eeccceeEEE
Confidence 4678889999998742 1234444333457899999999876 4566543 467899999999876 4667888999
Q ss_pred EecEEEec
Q psy675 250 RRNHIHHG 257 (1175)
Q Consensus 250 ~~~~I~~~ 257 (1175)
.+|+|+-.
T Consensus 436 q~c~i~~r 443 (587)
T PLN02313 436 QDCDINAR 443 (587)
T ss_pred EccEEEEe
Confidence 99999864
No 120
>PLN02197 pectinesterase
Probab=62.37 E-value=42 Score=41.53 Aligned_cols=85 Identities=13% Similarity=0.151 Sum_probs=61.8
Q ss_pred EEECCCcceEEeeeEEEeCCC--CCeEEEEEccCccceEeeeeEecCcceeEEEeeceeEEEEeeEEEecCceeEEEecc
Q psy675 167 LEVGEHATPTIDHCIIRSTSV--VGAAVCVSGVCASPTLRHCDISDCENVGLYVTDYAQGLYEDNEISRNALAGIWVKNY 244 (1175)
Q Consensus 167 i~v~~~~~~~i~~c~i~~~~~--~g~~v~v~g~~a~~~i~~c~i~~~~~~GI~v~~~s~~~ie~c~i~~~~~~gI~v~~~ 244 (1175)
+.+. +..+..++..|++... .+.+|-++-.+.+..+.+|+|.+.+ .-+++. ..+..+++|.|.++-+ .|.+.
T Consensus 359 ~~v~-~~~F~a~nitf~Ntag~~~~QAVAlrv~~D~~~fy~C~f~GyQ-DTLy~~-~~Rqyy~~C~I~GtVD---FIFG~ 432 (588)
T PLN02197 359 VQVE-SEGFMAKWIGFKNTAGPMGHQAVAIRVNGDRAVIFNCRFDGYQ-DTLYVN-NGRQFYRNIVVSGTVD---FIFGK 432 (588)
T ss_pred EEEE-CCcEEEEEeEEEeCCCCCCCceEEEEecCCcEEEEEeEEEecC-cceEec-CCCEEEEeeEEEeccc---ccccc
Confidence 4443 4678899999998642 1244544434468999999999887 556654 4577999999999866 46677
Q ss_pred CcceEEecEEEec
Q psy675 245 ANPIMRRNHIHHG 257 (1175)
Q Consensus 245 a~~~i~~~~I~~~ 257 (1175)
+...|.+|+|+--
T Consensus 433 a~avfq~C~i~~r 445 (588)
T PLN02197 433 SATVIQNSLIVVR 445 (588)
T ss_pred eeeeeecCEEEEe
Confidence 8889999998753
No 121
>PF03718 Glyco_hydro_49: Glycosyl hydrolase family 49; InterPro: IPR005192 O-Glycosyl hydrolases 3.2.1. from EC are a widespread group of enzymes that hydrolyse the glycosidic bond between two or more carbohydrates, or between a carbohydrate and a non-carbohydrate moiety. A classification system for glycosyl hydrolases, based on sequence similarity, has led to the definition of 85 different families [, ]. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. This is a family of dextranase (3.2.1.11 from EC) and isopullulanase (3.2.1.57 from EC) which are all members of glycoside hydrolase family 49 (GH49 from CAZY). Dextranase hydrolyses alpha-1,6-glycosidic bonds in dextran polymers.; GO: 0004553 hydrolase activity, hydrolyzing O-glycosyl compounds; PDB: 1X0C_A 1WMR_A 2Z8G_B 1OGM_X 1OGO_X.
Probab=50.32 E-value=4.1e+02 Score=32.31 Aligned_cols=89 Identities=17% Similarity=0.132 Sum_probs=48.1
Q ss_pred ccceEeeeeEecCcceeEEEeece----eEEEEeeEEEe---cCceeEEEeccCcceEEecEEEecccceEEEecCCCcc
Q psy675 199 ASPTLRHCDISDCENVGLYVTDYA----QGLYEDNEISR---NALAGIWVKNYANPIMRRNHIHHGRDVGIFTFDNGHIF 271 (1175)
Q Consensus 199 a~~~i~~c~i~~~~~~GI~v~~~s----~~~ie~c~i~~---~~~~gI~v~~~a~~~i~~~~I~~~~~~GI~~~~~g~g~ 271 (1175)
..+++.+-+|.+.....+.+.+.. ...+++-.+.+ .-..|+.+.. .-++++|=++.+. ..|-
T Consensus 329 q~~~~~GiTI~~pP~~Sm~l~g~~~~~~~~~i~nyKqVGaW~~qtDGi~ly~--nS~i~dcF~h~nD-D~iK-------- 397 (582)
T PF03718_consen 329 QTLTCEGITINDPPFHSMDLYGNENDKFSMNISNYKQVGAWYFQTDGIELYP--NSTIRDCFIHVND-DAIK-------- 397 (582)
T ss_dssp EEEEEES-EEE--SS-SEEEESSSGGGEEEEEEEEEEE---CTT----B--T--T-EEEEEEEEESS--SEE--------
T ss_pred ceEEEEeeEecCCCcceEEecCCccccccceeeceeeeeeEEeccCCccccC--CCeeeeeEEEecC-chhh--------
Confidence 467778888888887888887665 35666666654 1235777764 3456777777664 4443
Q ss_pred cccCCcceEecceeeecccccEEEEecC
Q psy675 272 PISNSNPTIRRNEIYNGHQGGVYIFGEG 299 (1175)
Q Consensus 272 ~~~~s~~~i~~n~I~~~~~~GI~v~~~~ 299 (1175)
...+.+.++++.|-.+....+.-.+..
T Consensus 398 -lYhS~v~v~~~ViWk~~Ngpiiq~GW~ 424 (582)
T PF03718_consen 398 -LYHSNVSVSNTVIWKNENGPIIQWGWT 424 (582)
T ss_dssp ---STTEEEEEEEEEE-SSS-SEE--CS
T ss_pred -eeecCcceeeeEEEecCCCCeEEeecc
Confidence 235778999999999877777555543
No 122
>PRK09718 hypothetical protein; Validated
Probab=49.14 E-value=32 Score=40.74 Aligned_cols=31 Identities=3% Similarity=-0.024 Sum_probs=13.5
Q ss_pred EEEeeEEEecCceeEEEeccCcceEEecEEEecc
Q psy675 225 LYEDNEISRNALAGIWVKNYANPIMRRNHIHHGR 258 (1175)
Q Consensus 225 ~ie~c~i~~~~~~gI~v~~~a~~~i~~~~I~~~~ 258 (1175)
.+.+|.+.+....+..+ +...+.++.+.++.
T Consensus 126 ~Lg~CNFsgAdLsgA~F---arA~L~rvsFinCK 156 (512)
T PRK09718 126 EIGDCNFTTAIVDNVIF---KCRRLHNVIFIKAS 156 (512)
T ss_pred ccCccccccCCCCCCcc---ccceecceEEEecc
Confidence 44445555544443311 23344444554444
No 123
>smart00710 PbH1 Parallel beta-helix repeats. The tertiary structures of pectate lyases and rhamnogalacturonase A show a stack of parallel beta strands that are coiled into a large helix. Each coil of the helix represents a structural repeat that, in some homologues, can be recognised from sequence information alone. Conservation of asparagines might be connected with asparagine-ladders that contribute to the stability of the fold. Proteins containing these repeats most often are enzymes with polysaccharide substrates.
Probab=44.54 E-value=27 Score=22.54 Aligned_cols=17 Identities=47% Similarity=0.716 Sum_probs=7.0
Q ss_pred eEeCceEEeceeeeEEE
Q psy675 1057 TIRRNEIYNGHQGGVYI 1073 (1175)
Q Consensus 1057 ~i~~n~i~~~~~~GI~~ 1073 (1175)
+|.+|.|+++...||++
T Consensus 5 ~i~~n~i~~~~~~Gi~i 21 (26)
T smart00710 5 TIENNTIRNNGGDGIYI 21 (26)
T ss_pred EEECCEEEeCCCCcEEE
Confidence 34444444444444443
No 124
>PRK09718 hypothetical protein; Validated
Probab=42.00 E-value=53 Score=39.00 Aligned_cols=16 Identities=0% Similarity=-0.076 Sum_probs=7.3
Q ss_pred ceEeeeEEEeCceeeE
Q psy675 370 PVLRRNRIHSGKQVGV 385 (1175)
Q Consensus 370 ~~i~~n~i~~~~~~GI 385 (1175)
+.+++..+.++.-.++
T Consensus 228 T~LkgVDFSdC~Le~~ 243 (512)
T PRK09718 228 VRISTGNFKDCITEQL 243 (512)
T ss_pred CcCCCcccccccccce
Confidence 3444445555543444
No 125
>PRK10123 wcaM putative colanic acid biosynthesis protein; Provisional
Probab=29.20 E-value=5.2e+02 Score=28.42 Aligned_cols=11 Identities=27% Similarity=0.329 Sum_probs=6.6
Q ss_pred EEEEeCceeee
Q psy675 90 LVFVHSGVYRG 100 (1175)
Q Consensus 90 ~I~v~~G~Y~e 100 (1175)
++.||+|.--|
T Consensus 58 tvvvpagl~ce 68 (464)
T PRK10123 58 TVVVPAGLVCD 68 (464)
T ss_pred EEEecCccEec
Confidence 66666665444
Done!