RPS-BLAST 2.2.26 [Sep-21-2011]
Database: scop70_1_75
13,730 sequences; 2,407,596 total letters
Searching..................................................done
Query= psy6758
(101 letters)
>d1ckaa_ b.34.2.1 (A:) C-Crk, N-terminal SH3 domain {Mouse (Mus
musculus) [TaxId: 10090]}
Length = 57
Score = 47.0 bits (112), Expect = 2e-09
Identities = 16/55 (29%), Positives = 29/55 (52%), Gaps = 2/55 (3%)
Query: 9 KVLYDFDYSTKDGKYVRIQEGEKLFLIKKTNKDWWQVIRSSGKPFYVPASYVEVY 63
+ L+DF+ + ++ + ++G+ L + K + WW S GK +P YVE Y
Sbjct: 5 RALFDFNGNDEED--LPFKKGDILRIRDKPEEQWWNAEDSEGKRGMIPVPYVEKY 57
>d1gl5a_ b.34.2.1 (A:) tyrosine kinase tec {Mouse (Mus musculus)
[TaxId: 10090]}
Length = 67
Score = 46.7 bits (111), Expect = 4e-09
Identities = 14/61 (22%), Positives = 31/61 (50%), Gaps = 2/61 (3%)
Query: 7 TLKVLYDFDYSTKDGKYVRIQEGEKLFLIKKTNKDWWQVIRSSGKPFYVPASYVEVYKKL 66
+ +YDF + +R++ G++ +++K + WW+ G Y+P++YV K
Sbjct: 4 IVVAMYDFQATEAHD--LRLERGQEYIILEKNDLHWWRARDKYGSEGYIPSNYVTGKKSN 61
Query: 67 S 67
+
Sbjct: 62 N 62
>d1ugva_ b.34.2.1 (A:) Olygophrenin-1 like protein (KIAA0621)
{Human (Homo sapiens) [TaxId: 9606]}
Length = 72
Score = 46.8 bits (111), Expect = 4e-09
Identities = 13/61 (21%), Positives = 21/61 (34%), Gaps = 2/61 (3%)
Query: 9 KVLYDFDYSTKDGKYVRIQEGEKLFLIKKTNKDWWQVIRSSGKPFYVPASYVEVYKKLSN 68
K LY + G + + + W +GK +P +YVE S+
Sbjct: 14 KALYACKAEHDS--ELSFTAGTVFDNVHPSQEPGWLEGTLNGKTGLIPENYVEFLSGPSS 71
Query: 69 G 69
G
Sbjct: 72 G 72
>d1awwa_ b.34.2.1 (A:) Bruton's tyrosine kinase {Human (Homo
sapiens) [TaxId: 9606]}
Length = 67
Score = 46.3 bits (110), Expect = 6e-09
Identities = 13/53 (24%), Positives = 33/53 (62%), Gaps = 2/53 (3%)
Query: 9 KVLYDFDYSTKDGKYVRIQEGEKLFLIKKTNKDWWQVIRSSGKPFYVPASYVE 61
LYD+ + +++++G++ F+++++N WW+ +G+ Y+P++YV
Sbjct: 12 VALYDYMPMNAND--LQLRKGDEYFILEESNLPWWRARDKNGQEGYIPSNYVT 62
>d2hspa_ b.34.2.1 (A:) Phospholipase C, SH3 domain {Human (Homo
sapiens) [TaxId: 9606]}
Length = 71
Score = 45.6 bits (108), Expect = 1e-08
Identities = 12/56 (21%), Positives = 24/56 (42%), Gaps = 2/56 (3%)
Query: 9 KVLYDFDYSTKDGKYVRIQEGEKLFLIKKTNKDWWQVIRSSGKPFYVPASYVEVYK 64
K L+D+ +D + + + ++K WW+ K + P++YVE
Sbjct: 10 KALFDYKAQREDE--LTFIKSAIIQNVEKQEGGWWRGDYGGKKQLWFPSNYVEEMV 63
>d1ujya_ b.34.2.1 (A:) Rac/CDC42 GEF 6 {Human (Homo sapiens)
[TaxId: 9606]}
Length = 76
Score = 44.5 bits (105), Expect = 3e-08
Identities = 11/61 (18%), Positives = 31/61 (50%), Gaps = 3/61 (4%)
Query: 4 QDVTLKVLYDFDYSTKDGKYVRIQEGEKLFLIKKTNKDWWQVIRSSGKPFYVPASYVEVY 63
+ +K ++F + +D + + +G+ +++ + WW+ +G+ + P++YV
Sbjct: 9 HQLIVKARFNFKQTNEDE--LSVCKGDIIYVTRVEEGGWWEG-TLNGRTGWFPSNYVREI 65
Query: 64 K 64
K
Sbjct: 66 K 66
>d1udla_ b.34.2.1 (A:) Intersectin 2 (KIAA1256) {Human (Homo
sapiens) [TaxId: 9606]}
Length = 98
Score = 44.5 bits (105), Expect = 5e-08
Identities = 14/59 (23%), Positives = 30/59 (50%), Gaps = 3/59 (5%)
Query: 9 KVLYDFDYSTKDGKYVRIQEGEKLFLIKKTNKDWWQVIRSSGKPFYVPASYVEVYKKLS 67
+YD+ + +D + +G+ + ++ K + DWWQ +G P++YV++ S
Sbjct: 38 IAMYDYAANNEDE--LSFSKGQLINVMNKDDPDWWQG-EINGVTGLFPSNYVKMTTDSS 93
Score = 23.3 bits (50), Expect = 5.1
Identities = 7/15 (46%), Positives = 12/15 (80%)
Query: 48 SSGKPFYVPASYVEV 62
SSG+ + PAS+V++
Sbjct: 5 SSGQKGWFPASHVKL 19
>d1utia_ b.34.2.1 (A:) Grb2-related adaptor protein 2 (Mona/Gads)
{Mouse (Mus musculus) [TaxId: 10090]}
Length = 57
Score = 43.5 bits (103), Expect = 5e-08
Identities = 16/54 (29%), Positives = 26/54 (48%), Gaps = 3/54 (5%)
Query: 9 KVLYDFDYSTKDGKYVRIQEGEKLFLIKKTNKDWWQVIRSSGKPFYVPASYVEV 62
+ LYDF+ +D + + GE + ++ +N WW R K PA+YV
Sbjct: 5 RALYDFEALEEDE--LGFRSGEVVEVLDSSNPSWWTG-RLHNKLGLFPANYVAP 55
>d1k9aa1 b.34.2.1 (A:6-76) Carboxyl-terminal src kinase (csk)
{Human (Homo sapiens) [TaxId: 9606]}
Length = 71
Score = 44.1 bits (104), Expect = 5e-08
Identities = 12/65 (18%), Positives = 30/65 (46%), Gaps = 3/65 (4%)
Query: 6 VTLKVLYDFDYSTKDGKYVRIQEGEKLFLIKKT-NKDWWQVIRSSGKPFYVPASYVEVYK 64
Y+F + + + +G+ L ++ T + +W++ G+ +PA+YV+ +
Sbjct: 7 TECIAKYNFHGTAEQD--LPFCKGDVLTIVAVTKDPNWYKAKNKVGREGIIPANYVQKRE 64
Query: 65 KLSNG 69
+ G
Sbjct: 65 GVKAG 69
>d1gcqa_ b.34.2.1 (A:) Growth factor receptor-bound protein 2
(GRB2), N- and C-terminal domains {Human (Homo sapiens)
[TaxId: 9606]}
Length = 56
Score = 43.5 bits (103), Expect = 5e-08
Identities = 11/53 (20%), Positives = 25/53 (47%), Gaps = 3/53 (5%)
Query: 9 KVLYDFDYSTKDGKYVRIQEGEKLFLIKKTNKDWWQVIRSSGKPFYVPASYVE 61
+ L+DFD + + G+ + ++ ++ +WW+ G+ P +YV
Sbjct: 5 QALFDFDPQEDGE--LGFRRGDFIHVMDNSDPNWWKG-ACHGQTGMFPRNYVT 54
>d2rn8a1 b.34.2.1 (A:176-228) Bruton's tyrosine kinase {Mus
musculus [TaxId: 10090]}
Length = 53
Score = 43.3 bits (102), Expect = 6e-08
Identities = 13/53 (24%), Positives = 26/53 (49%), Gaps = 2/53 (3%)
Query: 9 KVLYDFDYSTKDGKYVRIQEGEKLFLIKKTNKDWWQVIRSSGKPFYVPASYVE 61
LYD+ + + ++ E+ +L+ + WW+V +G Y P+SY+
Sbjct: 2 IALYDYQTNDPQE--LALRCDEEYYLLDSSEIHWWRVQDKNGHEGYAPSSYLV 52
>d1jo8a_ b.34.2.1 (A:) Actin binding protein ABP1 {Baker's yeast
(Saccharomyces cerevisiae) [TaxId: 4932]}
Length = 58
Score = 43.2 bits (102), Expect = 7e-08
Identities = 13/55 (23%), Positives = 25/55 (45%), Gaps = 3/55 (5%)
Query: 9 KVLYDFDYSTKDGKYVRIQEGEKLFLIKKTNKDWWQ-VIRSSGKPFYVPASYVEV 62
YD+D + + + E +K+ I+ + DWW + G P++YV +
Sbjct: 4 TAEYDYDAAEDNE--LTFVENDKIINIEFVDDDWWLGELEKDGSKGLFPSNYVSL 56
>d2iima1 b.34.2.1 (A:58-119) p56-lck tyrosine kinase, SH3 domain
{Human (Homo sapiens) [TaxId: 9606]}
Length = 62
Score = 43.3 bits (102), Expect = 8e-08
Identities = 12/59 (20%), Positives = 33/59 (55%), Gaps = 2/59 (3%)
Query: 3 LQDVTLKVLYDFDYSTKDGKYVRIQEGEKLFLIKKTNKDWWQVIRSSGKPFYVPASYVE 61
LQD + L+ ++ S + ++GE+L +++++ + W ++G+ ++P ++V
Sbjct: 4 LQDNLVIALHSYEPSHDGD--LGFEKGEQLRILEQSGEWWKAQSLTTGQEGFIPFNFVA 60
>d1sema_ b.34.2.1 (A:) Growth factor receptor-bound protein 2
(GRB2), N- and C-terminal domains {Caenorhabditis
elegans, SEM-5 [TaxId: 6239]}
Length = 58
Score = 43.1 bits (102), Expect = 9e-08
Identities = 13/55 (23%), Positives = 28/55 (50%), Gaps = 3/55 (5%)
Query: 9 KVLYDFDYSTKDGKYVRIQEGEKLFLIKKTNKDWWQVIRSSGKPFYVPASYVEVY 63
+ L+DF+ + + G+ + LI K + +WW+ + + + P++YV Y
Sbjct: 6 QALFDFNPQESGE--LAFKRGDVITLINKDDPNWWEG-QLNNRRGIFPSNYVCPY 57
>d1uj0a_ b.34.2.1 (A:) Signal transducing adaptor molecule Stam2
{Mouse (Mus musculus) [TaxId: 10090]}
Length = 58
Score = 42.7 bits (101), Expect = 1e-07
Identities = 11/53 (20%), Positives = 26/53 (49%), Gaps = 3/53 (5%)
Query: 9 KVLYDFDYSTKDGKYVRIQEGEKLFLIKKTNKDWWQVIRSSGKPFYVPASYVE 61
+ LYDF+ + + + GE + ++ ++ +WWQ + P+++V
Sbjct: 6 RALYDFEAVEDNE--LTFKHGELITVLDDSDANWWQG-ENHRGTGLFPSNFVT 55
>d1u06a1 b.34.2.1 (A:7-61) alpha-Spectrin, SH3 domain {Chicken
(Gallus gallus) [TaxId: 9031]}
Length = 55
Score = 42.4 bits (100), Expect = 1e-07
Identities = 19/54 (35%), Positives = 32/54 (59%), Gaps = 3/54 (5%)
Query: 9 KVLYDFDYSTKDGKYVRIQEGEKLFLIKKTNKDWWQVIRSSGKPFYVPASYVEV 62
LYD+ + V +++G+ L L+ TNKDWW+V + + +VPA+YV+
Sbjct: 4 LALYDYQEKSPRE--VTMKKGDILTLLNSTNKDWWKV-EVNDRQGFVPAAYVKK 54
>d1fmka1 b.34.2.1 (A:82-145) c-src protein tyrosine kinase {Human
(Homo sapiens) [TaxId: 9606]}
Length = 64
Score = 42.5 bits (100), Expect = 2e-07
Identities = 18/61 (29%), Positives = 33/61 (54%), Gaps = 3/61 (4%)
Query: 7 TLKVLYDFDYSTKDGKYVRIQEGEKLFLIKKTNKDWWQVIR-SSGKPFYVPASYVEVYKK 65
T LYD++ T+ + ++GE+L ++ T DWW S+G+ Y+P++YV
Sbjct: 4 TFVALYDYESRTETD--LSFKKGERLQIVNNTEGDWWLAHSLSTGQTGYIPSNYVAPSDS 61
Query: 66 L 66
+
Sbjct: 62 I 62
>d1wfwa_ b.34.2.1 (A:) Kalirin-9a {Mouse (Mus musculus) [TaxId:
10090]}
Length = 74
Score = 42.8 bits (100), Expect = 2e-07
Identities = 12/68 (17%), Positives = 30/68 (44%), Gaps = 7/68 (10%)
Query: 7 TLKVLYDFDYSTKDGKYVRIQEGEKLFLIKKTNKDWWQVIR-----SSGKPFYVPASYVE 61
T+ V+ D+ ++ + + +GE + ++ ++ V + S +VP S +
Sbjct: 9 TMTVIKDYYALKEN--EICVSQGEVVQVLAVNQQNMCLVYQPASDHSPAAEGWVPGSILA 66
Query: 62 VYKKLSNG 69
+ S+G
Sbjct: 67 PFSGPSSG 74
>d1ng2a2 b.34.2.1 (A:215-332) p47pox (neutrophil cytosolic factor
1) {Human (Homo sapiens) [TaxId: 9606]}
Length = 118
Score = 43.5 bits (102), Expect = 2e-07
Identities = 14/78 (17%), Positives = 29/78 (37%), Gaps = 3/78 (3%)
Query: 9 KVLYDFDYSTKDGKYVRIQEGEKLFLIKKTNKDWWQVIRSSGKPFYVPASYVEVYKKLSN 68
+ + D V + EGE + +I K WW + R Y P+ Y++ + +
Sbjct: 18 VAIKAYTAVEGDE--VSLLEGEAVEVIHKLLDGWWVI-RKDDVTGYFPSMYLQKSGQDVS 74
Query: 69 GNRNNVENINPTMEKTRS 86
+ ++ P +
Sbjct: 75 QAQRQIKRGAPPRRSSIR 92
>d1arka_ b.34.2.1 (A:) SH3 domain from nebulin {Human (Homo
sapiens) [TaxId: 9606]}
Length = 60
Score = 42.0 bits (99), Expect = 2e-07
Identities = 12/55 (21%), Positives = 30/55 (54%), Gaps = 3/55 (5%)
Query: 9 KVLYDFDYSTKDGKYVRIQEGEKLFLIKKTNKDWWQ-VIRSSGKPFYVPASYVEV 62
+ +YD+ + D V ++G+ + ++ ++ W ++ +G+ +PA+YVE
Sbjct: 7 RAMYDYMAADADE--VSFKDGDAIINVQAIDEGWMYGTVQRTGRTGMLPANYVEA 59
>d1spka_ b.34.2.1 (A:) BAI1-associated protein 2-like 1 (RIKEN
cDNA 1300006m19) {Mouse (Mus musculus) [TaxId: 10090]}
Length = 72
Score = 42.1 bits (99), Expect = 2e-07
Identities = 11/63 (17%), Positives = 27/63 (42%), Gaps = 3/63 (4%)
Query: 9 KVLYDFDYSTKDGKYVRIQEGEKLFLIKKTNKD--WWQVIRSSGKPFYVPASYVEVYKKL 66
K ++ + + + +G+ L L+ KD + ++ + P+SY ++
Sbjct: 11 KTIFPHT-AGNNKTLLSFAQGDVLTLLIPEEKDGWLYGEHDTTKARGWFPSSYTKLLSGP 69
Query: 67 SNG 69
S+G
Sbjct: 70 SSG 72
>d1u5sa1 b.34.2.1 (A:1-71) Nck-2 {Human (Homo sapiens) [TaxId:
9606]}
Length = 71
Score = 42.1 bits (99), Expect = 3e-07
Identities = 16/58 (27%), Positives = 31/58 (53%), Gaps = 4/58 (6%)
Query: 7 TLKVLYDFDYSTKDGKYVRIQEGEKLFLIKKTN--KDWWQVIRSSGKPFYVPASYVEV 62
++ LY F T++ + ++GE + +I+K +WW+ + G+ VP +YV V
Sbjct: 8 VVQTLYPFSSVTEE--ELNFEKGETMEVIEKPENDPEWWKCKNARGQVGLVPKNYVVV 63
>d1k4us_ b.34.2.1 (S:) p67phox {Human (Homo sapiens) [TaxId:
9606]}
Length = 62
Score = 41.6 bits (98), Expect = 3e-07
Identities = 13/53 (24%), Positives = 28/53 (52%), Gaps = 3/53 (5%)
Query: 9 KVLYDFDYSTKDGKYVRIQEGEKLFLIKKTNKDWWQVIRSSGKPFYVPASYVE 61
+ L+ ++ + + + QEG+ + ++ K N++W + S GK P +VE
Sbjct: 9 EALFSYEATQPED--LEFQEGDIILVLSKVNEEWLEG-ESKGKVGIFPKVFVE 58
>d2v1ra1 b.34.2.1 (A:10-76) Peroxisomal membrane protein Pex13p
{Baker's yeast (Saccharomyces cerevisiae) [TaxId:
4932]}
Length = 67
Score = 41.8 bits (98), Expect = 4e-07
Identities = 16/59 (27%), Positives = 33/59 (55%), Gaps = 6/59 (10%)
Query: 9 KVLYDFDYSTKDGKYVRIQEGEKLFLIKKT-----NKDWWQVIRSSGKPFYVPASYVEV 62
+ LYDF + + V +++G+ + ++ K + DWW+V +G Y+P +Y+E+
Sbjct: 9 RALYDFVPENPEME-VALKKGDLMAILSKKDPLGRDSDWWKVRTKNGNIGYIPYNYIEI 66
>d1oota_ b.34.2.1 (A:) Hypothetical protein YFR024c {Baker's yeast
(Saccharomyces cerevisiae) [TaxId: 4932]}
Length = 58
Score = 41.3 bits (97), Expect = 4e-07
Identities = 14/55 (25%), Positives = 28/55 (50%), Gaps = 3/55 (5%)
Query: 9 KVLYDFDYSTKDGKYVRIQEGEKLFLIKKTNK-DWWQVIRSSGKPFYVPASYVEV 62
LY F + ++G+ + ++KK++ + W R +G+ PA+YVE+
Sbjct: 5 VALYSFAGEESGD--LPFRKGDVITILKKSDSQNDWWTGRVNGREGIFPANYVEL 57
>d1gria1 b.34.2.1 (A:1-56) Growth factor receptor-bound protein 2
(GRB2), N- and C-terminal domains {Human (Homo sapiens)
[TaxId: 9606]}
Length = 56
Score = 41.2 bits (97), Expect = 4e-07
Identities = 12/54 (22%), Positives = 25/54 (46%), Gaps = 2/54 (3%)
Query: 9 KVLYDFDYSTKDGKYVRIQEGEKLFLIKKTNKDWWQVIRSSGKPFYVPASYVEV 62
YDF + D + + G+ L ++ + W +GK ++P +Y+E+
Sbjct: 4 IAKYDFKATADD--ELSFKRGDILKVLNEECDQNWYKAELNGKDGFIPKNYIEM 55
>d1qcfa1 b.34.2.1 (A:80-145) Hemapoetic cell kinase Hck {Human
(Homo sapiens) [TaxId: 9606]}
Length = 65
Score = 41.3 bits (97), Expect = 5e-07
Identities = 12/61 (19%), Positives = 33/61 (54%), Gaps = 2/61 (3%)
Query: 6 VTLKVLYDFDYSTKDGKYVRIQEGEKLFLIKKTNKDWWQVIRSSGKPFYVPASYVEVYKK 65
+ + LYD++ + + Q+G+++ +++++ + W ++ K Y+P++YV
Sbjct: 5 IIVVALYDYEAIHHED--LSFQKGDQMVVLEESGEWWKARSLATRKEGYIPSNYVARVDS 62
Query: 66 L 66
L
Sbjct: 63 L 63
>d1opka1 b.34.2.1 (A:83-139) Abl tyrosine kinase, SH3 domain
{Mouse (Mus musculus) [TaxId: 10090]}
Length = 57
Score = 40.9 bits (96), Expect = 6e-07
Identities = 14/52 (26%), Positives = 26/52 (50%), Gaps = 2/52 (3%)
Query: 10 VLYDFDYSTKDGKYVRIQEGEKLFLIKKTNKDWWQVIRSSGKPFYVPASYVE 61
LYDF S + + I +GEKL ++ + W ++ +VP++Y+
Sbjct: 5 ALYDFVASGDNT--LSITKGEKLRVLGYNHNGEWCEAQTKNGQGWVPSNYIT 54
>d1efna_ b.34.2.1 (A:) Fyn proto-oncogene tyrosine kinase, SH3
domain {Human (Homo sapiens) [TaxId: 9606]}
Length = 57
Score = 39.7 bits (93), Expect = 2e-06
Identities = 16/53 (30%), Positives = 31/53 (58%), Gaps = 3/53 (5%)
Query: 10 VLYDFDYSTKDGKYVRIQEGEKLFLIKKTNKDWWQVIR-SSGKPFYVPASYVE 61
LYD++ T+D + +GEK ++ + DWW+ ++G+ Y+P++YV
Sbjct: 5 ALYDYEAITEDD--LSFHKGEKFQILNSSEGDWWEARSLTTGETGYIPSNYVA 55
>d1uffa_ b.34.2.1 (A:) Intersectin 2 (KIAA1256) {Human (Homo
sapiens) [TaxId: 9606]}
Length = 93
Score = 40.1 bits (93), Expect = 2e-06
Identities = 13/55 (23%), Positives = 23/55 (41%), Gaps = 3/55 (5%)
Query: 9 KVLYDFDYSTKDGKYVRIQEGEKLFLIKKTN-KDWWQVIRSSGKPFYVPASYVEV 62
+ LY F+ D + G+ + + +KT + W G + P +YVE
Sbjct: 9 RALYPFEARNHDE--MSFNSGDIIQVDEKTVGEPGWLYGSFQGNFGWFPCNYVEK 61
>d1ue9a_ b.34.2.1 (A:) Intersectin 2 (KIAA1256) {Human (Homo
sapiens) [TaxId: 9606]}
Length = 80
Score = 39.5 bits (92), Expect = 3e-06
Identities = 13/63 (20%), Positives = 27/63 (42%), Gaps = 6/63 (9%)
Query: 9 KVLYDFDYSTKDGKYVRIQEGEKLFLIKKTNKDWWQVI----RSSGKPFYVPASYVEVYK 64
+V + S + + + G+ + ++KK WWQ + + PAS+V++
Sbjct: 11 QVTSAYVASGSEQ--LSLAPGQLILILKKNTSGWWQGELQARGKKRQKGWFPASHVKLLG 68
Query: 65 KLS 67
S
Sbjct: 69 PSS 71
>d1zuua1 b.34.2.1 (A:2-57) BZZ1 {Baker's yeast (Saccharomyces
cerevisiae) [TaxId: 4932]}
Length = 56
Score = 39.1 bits (91), Expect = 3e-06
Identities = 13/56 (23%), Positives = 25/56 (44%), Gaps = 4/56 (7%)
Query: 9 KVLYDFDYSTKDGKYVRIQEGEKLFLIKKTNKDW--WQVIRSSGKPFYVPASYVEV 62
KVLY + D + I G+K+ L+ + ++G+ VP +Y+ +
Sbjct: 3 KVLYAYVQKDDD--EITITPGDKISLVARDTGSGWTKINNDTTGETGLVPTTYIRI 56
>d1uhca_ b.34.2.1 (A:) Hypothetical protein Baa76854.1 (KIAA1010)
{Human (Homo sapiens) [TaxId: 9606]}
Length = 79
Score = 39.1 bits (91), Expect = 4e-06
Identities = 12/59 (20%), Positives = 26/59 (44%), Gaps = 5/59 (8%)
Query: 9 KVLYDFDYSTKDGKYVRIQEGEKLFLIKK---TNKDWWQVIRSSGKPFYVPASYVEVYK 64
+Y F + + + +KL +++ T W + +GK YVP++Y+ +
Sbjct: 17 FAVYTFKARNPNE--LSVSANQKLKILEFKDVTGNTEWWLAEVNGKKGYVPSNYIRKTE 73
>d1i07a_ b.34.2.1 (A:) EPS8 SH3 domain {Mouse (Mus musculus)
[TaxId: 10090]}
Length = 59
Score = 38.3 bits (89), Expect = 6e-06
Identities = 12/56 (21%), Positives = 27/56 (48%), Gaps = 3/56 (5%)
Query: 9 KVLYDFDYSTKDGKYVRIQEGEKLFLIKKTNKDWWQVIRSSGKPFYVPASYVEVYK 64
K YDF + + + + L ++ + WW+V +SG +VP + +++ +
Sbjct: 5 KSKYDFVARNSSE--LSVMKDDVLEILDD-RRQWWKVRNASGDSGFVPNNILDIMR 57
>d1ng2a1 b.34.2.1 (A:157-214) p47pox (neutrophil cytosolic factor
1) {Human (Homo sapiens) [TaxId: 9606]}
Length = 58
Score = 37.9 bits (88), Expect = 8e-06
Identities = 11/56 (19%), Positives = 30/56 (53%), Gaps = 3/56 (5%)
Query: 7 TLKVLYDFDYSTKDGKYVRIQEGEKLFLIKKTNKDWWQVIRSSGKPFYVPASYVEV 62
T + + D++ ++ + + G+ + +++K+ WW + K ++PAS++E
Sbjct: 4 TYRAIADYEKTSGSE--MALSTGDVVEVVEKSESGWWFC-QMKAKRGWIPASFLEP 56
>d1uhfa_ b.34.2.1 (A:) Intersectin 2 (KIAA1256) {Human (Homo
sapiens) [TaxId: 9606]}
Length = 69
Score = 37.8 bits (88), Expect = 1e-05
Identities = 11/54 (20%), Positives = 23/54 (42%), Gaps = 4/54 (7%)
Query: 9 KVLYDFDYSTKDGKYVRIQEGEKLFLIKKTNKDWWQVIRSSGKPFYVPASYVEV 62
LY + + EGE++ + +K + +WW + P++YV+
Sbjct: 12 IALYPYSSVEPG--DLTFTEGEEILVTQK-DGEWWTG-SIGDRSGIFPSNYVKP 61
>d1j3ta_ b.34.2.1 (A:) Intersectin 2 (KIAA1256) {Human (Homo
sapiens) [TaxId: 9606]}
Length = 74
Score = 37.9 bits (88), Expect = 1e-05
Identities = 8/66 (12%), Positives = 29/66 (43%), Gaps = 4/66 (6%)
Query: 4 QDVTLKVLYDFDYSTKDGKYVRIQEGEKLFLIKKTNKDWWQVIRSSGKPFYVPASYVEVY 63
+++ + L + + ++ + + + ++++ W+ + G + P SYV++
Sbjct: 9 ENLKAQALCSWTAKKDN--HLNFSKHDIITVLEQQENWWFGEVH--GGRGWFPKSYVKII 64
Query: 64 KKLSNG 69
+G
Sbjct: 65 PGSESG 70
>d1ycsb2 b.34.2.1 (B:457-519) 53BP2 {Human (Homo sapiens) [TaxId:
9606]}
Length = 63
Score = 36.7 bits (85), Expect = 2e-05
Identities = 15/58 (25%), Positives = 31/58 (53%), Gaps = 6/58 (10%)
Query: 9 KVLYDFDYSTKDGKYVRIQEGEKLFLIKKTNKD---WWQVIRSSGKPFYVPASYVEVY 63
L+D++ D + ++EG+ + +I + ++D WW R + K YVP + + +Y
Sbjct: 8 YALWDYEPQNDDE--LPMKEGDCMTIIHREDEDEIEWWWA-RLNDKEGYVPRNLLGLY 62
>d1gcqc_ b.34.2.1 (C:) Vav N-terminal SH3 domain {Mouse (Mus
musculus) [TaxId: 10090]}
Length = 69
Score = 36.0 bits (83), Expect = 6e-05
Identities = 10/63 (15%), Positives = 25/63 (39%), Gaps = 6/63 (9%)
Query: 7 TLKVLYDF----DYSTKDGKYVRIQEGEKLFLIKKTNKDWWQV--IRSSGKPFYVPASYV 60
++V ++ G ++R+ G+ + L K + W ++ + + P + V
Sbjct: 6 KMEVFQEYYGIPPPPGAFGPFLRLNPGDIVELTKAEAEHNWWEGRNTATNEVGWFPCNRV 65
Query: 61 EVY 63
Y
Sbjct: 66 HPY 68
>d1wlpb1 b.34.2.1 (B:229-281) p47pox (neutrophil cytosolic factor
1) {Human (Homo sapiens) [TaxId: 9606]}
Length = 53
Score = 34.5 bits (79), Expect = 2e-04
Identities = 13/52 (25%), Positives = 22/52 (42%), Gaps = 3/52 (5%)
Query: 10 VLYDFDYSTKDGKYVRIQEGEKLFLIKKTNKDWWQVIRSSGKPFYVPASYVE 61
+ + D V + EGE + +I K WW + R Y P+ Y++
Sbjct: 5 AIKAYTAVEGDE--VSLLEGEAVEVIHKLLDGWWVI-RKDDVTGYFPSMYLQ 53
>d1wiea_ b.34.2.1 (A:) RIM binding protein 2, RIMBP2 {Human (Homo
sapiens) [TaxId: 9606]}
Length = 96
Score = 34.3 bits (78), Expect = 5e-04
Identities = 8/59 (13%), Positives = 25/59 (42%), Gaps = 5/59 (8%)
Query: 9 KVLYDFDYSTKDGKY----VRIQEGEKLFLIKKTNKDW-WQVIRSSGKPFYVPASYVEV 62
Y ++ + + + G+ L++ ++D ++ G+ VP+++V+
Sbjct: 21 VARYSYNPFDGPNENPEAELPLTAGKYLYVYGDMDEDGFYEGELLDGQRGLVPSNFVDF 79
>d1kjwa1 b.34.2.1 (A:430-525) Psd-95 {Rat (Rattus norvegicus)
[TaxId: 10116]}
Length = 96
Score = 33.9 bits (77), Expect = 7e-04
Identities = 13/67 (19%), Positives = 30/67 (44%), Gaps = 8/67 (11%)
Query: 9 KVLYDFDYSTKDGKYVR---IQEGEKLFLIKKTNKDWWQVIR-----SSGKPFYVPASYV 60
+ L+D+D + G + + G+ L +I +++WWQ R + ++P+
Sbjct: 5 RALFDYDKTKDCGFLSQALSFRFGDVLHVIDAGDEEWWQARRVHSDSETDDIGFIPSKRR 64
Query: 61 EVYKKLS 67
++ S
Sbjct: 65 VERREWS 71
>d1t0ha_ b.34.2.1 (A:) SH3-like domain of the L-type calcium
channel {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]}
Length = 96
Score = 33.8 bits (77), Expect = 7e-04
Identities = 11/73 (15%), Positives = 30/73 (41%), Gaps = 7/73 (9%)
Query: 6 VTLKVLYDFDYSTKD-----GKYVRIQEGEKLFLIKKTNKDWWQ--VIRSSGKPFYVPAS 58
++ + + +D G + + + L + +K N DWW +++ + ++P+
Sbjct: 22 FAVRTNVRYSAAQEDDVPVPGMAISFEAKDFLHVKEKFNNDWWIGRLVKEGCEIGFIPSP 81
Query: 59 YVEVYKKLSNGNR 71
+L + R
Sbjct: 82 VKLENMRLQHEQR 94
>d1bb9a_ b.34.2.1 (A:) Amphiphysin 2 {Rat (Rattus norvegicus)
[TaxId: 10116]}
Length = 83
Score = 31.9 bits (72), Expect = 0.003
Identities = 9/70 (12%), Positives = 24/70 (34%), Gaps = 16/70 (22%)
Query: 9 KVLYDFDYSTKDGKYVRIQEGEKLFLIKKTNKD--------------WWQVIRSSGKPFY 54
+ +D+ + D ++++ G+ + +I N + W Q
Sbjct: 16 QAQHDYTATDTD--ELQLKAGDVVLVIPFQNPEEQDEGWLMGVKESDWNQHKELEKCRGV 73
Query: 55 VPASYVEVYK 64
P ++ E +
Sbjct: 74 FPENFTERVQ 83
>d1i1ja_ b.34.2.1 (A:) Melanoma inhibitory activity protein {Human
(Homo sapiens) [TaxId: 9606]}
Length = 106
Score = 31.6 bits (71), Expect = 0.005
Identities = 12/64 (18%), Positives = 25/64 (39%), Gaps = 10/64 (15%)
Query: 14 FDYSTKDGKYVRIQEGEKLFLIKK---TNKDWWQVI-------RSSGKPFYVPASYVEVY 63
DY D +++ I G+ +++ K + +W + + Y P+S V
Sbjct: 28 QDYMAPDCRFLTIHRGQVVYVFSKLKGRGRLFWGGSVQGDYYGDLAARLGYFPSSIVRED 87
Query: 64 KKLS 67
+ L
Sbjct: 88 QTLK 91
>d1ug1a_ b.34.2.1 (A:) Hypothetical protein Baa76854.1 (KIAA1010)
{Human (Homo sapiens) [TaxId: 9606]}
Length = 92
Score = 31.3 bits (70), Expect = 0.005
Identities = 11/59 (18%), Positives = 26/59 (44%), Gaps = 5/59 (8%)
Query: 9 KVLYDFDYSTKDGKYVRIQEGEKLFLIKKT---NKDWWQVIRSSGKPFYVPASYVEVYK 64
+ +F+ + V + EG+ + +IKK +I + +V +S+++ Y
Sbjct: 21 QAERNFNAAQDLD--VSLLEGDLVGVIKKKDPMGSQNRWLIDNGVTKGFVYSSFLKPYN 77
>d1phta_ b.34.2.1 (A:) Phosphatidylinositol 3-kinase (p85-alpha
subunit, pi3k), SH3 domain {Human (Homo sapiens)
[TaxId: 9606]}
Length = 83
Score = 29.0 bits (64), Expect = 0.042
Identities = 12/75 (16%), Positives = 26/75 (34%), Gaps = 18/75 (24%)
Query: 9 KVLYDFDYSTKDGKYVRIQEGEKLFLIKKTNKD---------------WWQVIR-SSGKP 52
+ LYD+ ++ + + G+ L + K + W ++G+
Sbjct: 7 RALYDYKKEREE--DIDLHLGDILTVNKGSLVALGFSDGQEARPEEIGWLNGYNETTGER 64
Query: 53 FYVPASYVEVYKKLS 67
P +YVE +
Sbjct: 65 GDFPGTYVEYIGRKK 79
>d1ri9a_ b.34.2.1 (A:) Fyn-binding protein (T-cell adapter protein
adap) {Human (Homo sapiens) [TaxId: 9606]}
Length = 77
Score = 26.3 bits (58), Expect = 0.35
Identities = 13/54 (24%), Positives = 23/54 (42%)
Query: 7 TLKVLYDFDYSTKDGKYVRIQEGEKLFLIKKTNKDWWQVIRSSGKPFYVPASYV 60
+ KV + ++++ GE L +I+ T+ GK YV SY+
Sbjct: 22 STKVTTSITSKKWGTRDLQVKPGESLEVIQTTDDTKVLCRNEEGKYGYVLRSYL 75
>d2j0181 d.301.1.1 (8:2-65) Ribosomal protein L35p {Thermus
thermophilus [TaxId: 274]}
Length = 64
Score = 25.4 bits (56), Expect = 0.60
Identities = 14/49 (28%), Positives = 22/49 (44%), Gaps = 4/49 (8%)
Query: 18 TKDGKYVRIQEGEKLFLIKKTNKDWWQVIRSSGKPFYVPASYVEVYKKL 66
T GK V ++ G++ +K+ K IR G+ F + E K L
Sbjct: 16 TASGKVVAMKTGKRHLNWQKSGK----EIRQKGRKFVLAKPEAERIKLL 60
>d2qam31 d.301.1.1 (3:1-64) Ribosomal protein L35p {Escherichia
coli [TaxId: 562]}
Length = 64
Score = 24.6 bits (54), Expect = 0.93
Identities = 8/49 (16%), Positives = 12/49 (24%), Gaps = 4/49 (8%)
Query: 18 TKDGKYVRIQEGEKLFLIKKTNKDWWQVIRSSGKPFYVPASYVEVYKKL 66
T G + + L KK K R V + +
Sbjct: 16 TGKGGFKHKHANLRHILTKKATK----RKRHLRPKAMVSKGDLGLVIAC 60
>gi|94984680|ref|YP_604044.1|(2-62:67) 50S ribosomal protein L35
[Deinococcus geothermalis DSM 11300]
gi|145572732|sp|Q1J0V9.1|RL35_DEIGD RecName: Full=50S
ribosomal protein L35 gi|94554961|gb|ABF44875.1|
ribosomal protein L35 [Deinococcus geothermalis DSM
11300] E=4e-21 s/c=1.69 id=84% cov=98%
Length = 61
Score = 23.5 bits (51), Expect = 2.2
Identities = 12/49 (24%), Positives = 18/49 (36%), Gaps = 4/49 (8%)
Query: 18 TKDGKYVRIQEGEKLFLIKKTNKDWWQVIRSSGKPFYVPASYVEVYKKL 66
T GK + + G++ K+ IR GK F + S K
Sbjct: 16 TATGKVMAFKSGKRHQNTGKSGD----EIRGKGKGFVLAKSEWARMKLG 60
>d1h5pa_ d.217.1.1 (A:) Nuclear autoantigen Sp100b {Human (Homo
sapiens) [TaxId: 9606]}
Length = 95
Score = 24.0 bits (52), Expect = 2.3
Identities = 8/40 (20%), Positives = 16/40 (40%), Gaps = 7/40 (17%)
Query: 21 GKYVRIQEGEKL----FLI---KKTNKDWWQVIRSSGKPF 53
K ++ ++ + F I + +K+W IR G
Sbjct: 34 KKCIQSEDKKWFTPREFEIEGDRGASKNWKLSIRCGGYTL 73
>d1oqja_ d.217.1.1 (A:) Glucocorticoid modulatory element binding
protein-1 (Gmeb1) {Human (Homo sapiens) [TaxId: 9606]}
Length = 90
Score = 22.9 bits (49), Expect = 5.9
Identities = 8/17 (47%), Positives = 9/17 (52%)
Query: 36 KKTNKDWWQVIRSSGKP 52
K T KDW + IR G
Sbjct: 50 KSTLKDWKRAIRLGGIM 66
>d1ufna_ d.217.1.1 (A:) Putative nuclear protein homolog
5830484a20rik {Mouse (Mus musculus) [TaxId: 10090]}
Length = 94
Score = 22.8 bits (49), Expect = 7.1
Identities = 13/39 (33%), Positives = 21/39 (53%), Gaps = 7/39 (17%)
Query: 21 GKYVRIQEGEKL----FLI---KKTNKDWWQVIRSSGKP 52
K ++ + G+ L FL + T+KDW VIR +G+
Sbjct: 39 KKCIQNEAGDWLTVKEFLNEGGRATSKDWKGVIRCNGET 77
>d1itka1 a.93.1.3 (A:18-423) Catalase-peroxidase KatG {Archaeon
Haloarcula marismortui [TaxId: 2238]}
Length = 406
Score = 23.1 bits (49), Expect = 8.1
Identities = 5/7 (71%), Positives = 7/7 (100%)
Query: 37 KTNKDWW 43
K+N+DWW
Sbjct: 4 KSNQDWW 10
Database: scop70_1_75
Posted date: Mar 27, 2010 6:21 PM
Number of letters in database: 2,407,596
Number of sequences in database: 13,730
Lambda K H
0.313 0.132 0.384
Gapped
Lambda K H
0.267 0.0710 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 13730
Number of Hits to DB: 389,402
Number of extensions: 16596
Number of successful extensions: 120
Number of sequences better than 10.0: 1
Number of HSP's gapped: 89
Number of HSP's successfully gapped: 65
Length of query: 101
Length of database: 2,407,596
Length adjustment: 62
Effective length of query: 39
Effective length of database: 1,556,336
Effective search space: 60697104
Effective search space used: 60697104
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)
S2: 47 (21.9 bits)