BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy676
(159 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|322798088|gb|EFZ19927.1| hypothetical protein SINV_08829 [Solenopsis invicta]
Length = 225
Score = 125 bits (313), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 49/79 (62%), Positives = 65/79 (82%)
Query: 24 KKLAYETDPAILLRRQKQIDFGKNTVGYDRYCSMVKREDRTKDHPKTPPKELKYSRRAWD 83
+ + YETDP +L RRQK+ID+GKNT+GYDRY ++ +E RT++HP+TPPK +KYSRR WD
Sbjct: 143 RHIEYETDPVVLARRQKEIDYGKNTIGYDRYIHLIPKEQRTREHPRTPPKSIKYSRRGWD 202
Query: 84 GLIKSWRSRLHFWDPPNEN 102
G++K WR +LH WDPP EN
Sbjct: 203 GMVKLWRKQLHSWDPPQEN 221
>gi|332018489|gb|EGI59079.1| Histone RNA hairpin-binding protein [Acromyrmex echinatior]
Length = 226
Score = 123 bits (309), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 50/79 (63%), Positives = 65/79 (82%)
Query: 24 KKLAYETDPAILLRRQKQIDFGKNTVGYDRYCSMVKREDRTKDHPKTPPKELKYSRRAWD 83
+ + YETDP +L RRQK+ID+GKNT GYDRY +V +E RT++HP+TPPK +KYSRR WD
Sbjct: 141 RHVEYETDPVVLARRQKEIDYGKNTNGYDRYIKLVPKEKRTREHPRTPPKYIKYSRRGWD 200
Query: 84 GLIKSWRSRLHFWDPPNEN 102
G+++ WR +LHFWDPP EN
Sbjct: 201 GMMRLWRKQLHFWDPPQEN 219
>gi|307174059|gb|EFN64746.1| Histone RNA hairpin-binding protein [Camponotus floridanus]
Length = 225
Score = 123 bits (308), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 49/79 (62%), Positives = 65/79 (82%)
Query: 24 KKLAYETDPAILLRRQKQIDFGKNTVGYDRYCSMVKREDRTKDHPKTPPKELKYSRRAWD 83
K + +ETDP +L RRQK+ID+GKNT+GYDRY ++ +E RT++HP+TPPK +KYSRR WD
Sbjct: 143 KHIEFETDPIVLARRQKEIDYGKNTIGYDRYIQLIPKEKRTREHPRTPPKYIKYSRRGWD 202
Query: 84 GLIKSWRSRLHFWDPPNEN 102
G++K WR +LH WDPP EN
Sbjct: 203 GMVKLWRKQLHSWDPPQEN 221
>gi|383851836|ref|XP_003701437.1| PREDICTED: uncharacterized protein LOC100878251 [Megachile
rotundata]
Length = 227
Score = 120 bits (301), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 49/76 (64%), Positives = 63/76 (82%)
Query: 24 KKLAYETDPAILLRRQKQIDFGKNTVGYDRYCSMVKREDRTKDHPKTPPKELKYSRRAWD 83
+++ YETDP +L RRQK+ID+GKNT+GYDRY V +E RT++HP+TPPK +KYSRR WD
Sbjct: 145 RRVEYETDPKVLARRQKEIDYGKNTIGYDRYIQAVPKEKRTREHPRTPPKYIKYSRRGWD 204
Query: 84 GLIKSWRSRLHFWDPP 99
G+IK WR +LH WDPP
Sbjct: 205 GMIKLWRKQLHQWDPP 220
>gi|307203819|gb|EFN82755.1| Histone RNA hairpin-binding protein [Harpegnathos saltator]
Length = 258
Score = 119 bits (299), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 48/83 (57%), Positives = 65/83 (78%)
Query: 24 KKLAYETDPAILLRRQKQIDFGKNTVGYDRYCSMVKREDRTKDHPKTPPKELKYSRRAWD 83
K + YE DP +L RRQK+ID+GKNT+GYDRY V ++ RT++HP+TPPK +KYSRR WD
Sbjct: 176 KHVEYEIDPIVLARRQKEIDYGKNTIGYDRYIQAVPKDKRTREHPRTPPKYIKYSRRGWD 235
Query: 84 GLIKSWRSRLHFWDPPNENGEPN 106
G+++ WR +LH WDPP E+ + N
Sbjct: 236 GMVRLWRKQLHSWDPPQEDNKTN 258
>gi|193610735|ref|XP_001944356.1| PREDICTED: hypothetical protein LOC100160338 [Acyrthosiphon pisum]
Length = 336
Score = 119 bits (298), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 63/116 (54%), Positives = 77/116 (66%), Gaps = 9/116 (7%)
Query: 25 KLAYETDPAILLRRQKQIDFGKNTVGYDRYCSMVKREDRTKDHPKTPPKELKYSRRAWDG 84
KL ETDP IL RRQKQIDFGKNT+GY +Y V + +R K HPKTPPK LKY+RRAWDG
Sbjct: 186 KLGRETDPLILSRRQKQIDFGKNTIGYVKYLEQVPKHERKKRHPKTPPKNLKYTRRAWDG 245
Query: 85 LIKSWRSRLHFWDPPNENGEPNSLL-------LDEDDDISSLD--SQSVDSLPCTP 131
LIK+WR +LH +DP + + + L L ++SLD SQ+ DS P TP
Sbjct: 246 LIKNWRVKLHLFDPDRRHDDEDDALTTGSSSNLYSLGSMTSLDSSSQASDSRPSTP 301
>gi|340726227|ref|XP_003401462.1| PREDICTED: hypothetical protein LOC100651022 [Bombus terrestris]
Length = 225
Score = 117 bits (293), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 46/76 (60%), Positives = 62/76 (81%)
Query: 24 KKLAYETDPAILLRRQKQIDFGKNTVGYDRYCSMVKREDRTKDHPKTPPKELKYSRRAWD 83
+++ YETDP +L RRQK+ID+GKNT+GYDRY V +E RT++HP+TPPK +KYSRR WD
Sbjct: 143 RRVEYETDPRVLARRQKEIDYGKNTIGYDRYIQAVPKEKRTREHPRTPPKYIKYSRRGWD 202
Query: 84 GLIKSWRSRLHFWDPP 99
+++ WR +LH WDPP
Sbjct: 203 SMVRLWRKQLHQWDPP 218
>gi|156546144|ref|XP_001602614.1| PREDICTED: hypothetical protein LOC100118716 [Nasonia vitripennis]
Length = 265
Score = 117 bits (293), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 50/81 (61%), Positives = 61/81 (75%)
Query: 24 KKLAYETDPAILLRRQKQIDFGKNTVGYDRYCSMVKREDRTKDHPKTPPKELKYSRRAWD 83
K YETDP +L RRQK ID+GKNT+GYDRY V ++ R+KDHP+TPP LKYSRR WD
Sbjct: 178 KNTEYETDPLVLARRQKDIDYGKNTIGYDRYTQEVPKDKRSKDHPRTPPMYLKYSRRGWD 237
Query: 84 GLIKSWRSRLHFWDPPNENGE 104
G++K WR +LH WDP N+ E
Sbjct: 238 GMVKLWRKQLHTWDPKNDEEE 258
>gi|350405469|ref|XP_003487443.1| PREDICTED: hypothetical protein LOC100745127 [Bombus impatiens]
Length = 225
Score = 117 bits (293), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 46/76 (60%), Positives = 62/76 (81%)
Query: 24 KKLAYETDPAILLRRQKQIDFGKNTVGYDRYCSMVKREDRTKDHPKTPPKELKYSRRAWD 83
+++ YETDP +L RRQK+ID+GKNT+GYDRY V +E RT++HP+TPPK +KYSRR WD
Sbjct: 143 RRVEYETDPKVLARRQKEIDYGKNTIGYDRYIQAVPKEKRTREHPRTPPKYIKYSRRGWD 202
Query: 84 GLIKSWRSRLHFWDPP 99
+++ WR +LH WDPP
Sbjct: 203 SMVRLWRKQLHQWDPP 218
>gi|110763164|ref|XP_001122465.1| PREDICTED: hypothetical protein LOC726745 [Apis mellifera]
Length = 222
Score = 117 bits (292), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 46/76 (60%), Positives = 62/76 (81%)
Query: 24 KKLAYETDPAILLRRQKQIDFGKNTVGYDRYCSMVKREDRTKDHPKTPPKELKYSRRAWD 83
+++ YETDP +L RRQK+ID+GKNT+GYDRY V +E RT++HP+TPPK +KYSRR WD
Sbjct: 141 RRVEYETDPRVLARRQKEIDYGKNTIGYDRYIQAVPKEKRTREHPRTPPKYIKYSRRGWD 200
Query: 84 GLIKSWRSRLHFWDPP 99
+++ WR +LH WDPP
Sbjct: 201 SMVRLWRKQLHQWDPP 216
>gi|157126117|ref|XP_001654544.1| replication-associated histone mRNA stem loop-binding protein,
putative [Aedes aegypti]
gi|108873388|gb|EAT37613.1| AAEL010422-PA [Aedes aegypti]
Length = 319
Score = 114 bits (286), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 51/75 (68%), Positives = 59/75 (78%)
Query: 24 KKLAYETDPAILLRRQKQIDFGKNTVGYDRYCSMVKREDRTKDHPKTPPKELKYSRRAWD 83
K + YE D +IL RRQKQID+GKNT+GY+ Y V RE RT DHPKTPPK +KYSRRAWD
Sbjct: 237 KPVEYEKDLSILERRQKQIDYGKNTLGYENYMKQVPREKRTNDHPKTPPKHIKYSRRAWD 296
Query: 84 GLIKSWRSRLHFWDP 98
GLIK WR +LH +DP
Sbjct: 297 GLIKVWRKKLHCFDP 311
>gi|347971318|ref|XP_003436725.1| AGAP013023-PA [Anopheles gambiae str. PEST]
gi|333468613|gb|EGK96998.1| AGAP013023-PA [Anopheles gambiae str. PEST]
Length = 271
Score = 113 bits (283), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 51/85 (60%), Positives = 64/85 (75%), Gaps = 3/85 (3%)
Query: 24 KKLAYETDPAILLRRQKQIDFGKNTVGYDRYCSMVKREDRTKDHPKTPPKELKYSRRAWD 83
+++ YETD A+L RRQKQID+GKNT+GY+ Y V R RTK+HP TP K LKYSRRAWD
Sbjct: 186 RQIEYETDEAVLARRQKQIDYGKNTLGYETYIQQVPRHARTKEHPATPQKHLKYSRRAWD 245
Query: 84 GLIKSWRSRLHFWDPPNENGEPNSL 108
GLIK WR +LH +DP NG+ ++
Sbjct: 246 GLIKVWRKKLHCFDP---NGDSSTF 267
>gi|347971316|ref|XP_003436724.1| AGAP013023-PB [Anopheles gambiae str. PEST]
gi|333468614|gb|EGK96999.1| AGAP013023-PB [Anopheles gambiae str. PEST]
Length = 305
Score = 112 bits (281), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 51/85 (60%), Positives = 64/85 (75%), Gaps = 3/85 (3%)
Query: 24 KKLAYETDPAILLRRQKQIDFGKNTVGYDRYCSMVKREDRTKDHPKTPPKELKYSRRAWD 83
+++ YETD A+L RRQKQID+GKNT+GY+ Y V R RTK+HP TP K LKYSRRAWD
Sbjct: 220 RQIEYETDEAVLARRQKQIDYGKNTLGYETYIQQVPRHARTKEHPATPQKHLKYSRRAWD 279
Query: 84 GLIKSWRSRLHFWDPPNENGEPNSL 108
GLIK WR +LH +DP NG+ ++
Sbjct: 280 GLIKVWRKKLHCFDP---NGDSSTF 301
>gi|347971310|ref|XP_003436723.1| AGAP012972-PA [Anopheles gambiae str. PEST]
gi|333468610|gb|EGK96997.1| AGAP012972-PA [Anopheles gambiae str. PEST]
Length = 305
Score = 112 bits (280), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 51/85 (60%), Positives = 64/85 (75%), Gaps = 3/85 (3%)
Query: 24 KKLAYETDPAILLRRQKQIDFGKNTVGYDRYCSMVKREDRTKDHPKTPPKELKYSRRAWD 83
+++ YETD A+L RRQKQID+GKNT+GY+ Y V R RTK+HP TP K LKYSRRAWD
Sbjct: 220 RQIEYETDEAVLARRQKQIDYGKNTLGYETYIQQVPRHARTKEHPATPQKHLKYSRRAWD 279
Query: 84 GLIKSWRSRLHFWDPPNENGEPNSL 108
GLIK WR +LH +DP NG+ ++
Sbjct: 280 GLIKVWRKKLHCFDP---NGDSSTF 301
>gi|195449507|ref|XP_002072102.1| GK22498 [Drosophila willistoni]
gi|195449511|ref|XP_002072104.1| GK22497 [Drosophila willistoni]
gi|194168187|gb|EDW83088.1| GK22498 [Drosophila willistoni]
gi|194168189|gb|EDW83090.1| GK22497 [Drosophila willistoni]
Length = 274
Score = 111 bits (277), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 49/76 (64%), Positives = 59/76 (77%)
Query: 29 ETDPAILLRRQKQIDFGKNTVGYDRYCSMVKREDRTKDHPKTPPKELKYSRRAWDGLIKS 88
E+DPAIL RRQKQID+GKNT Y+RY MV R RT+DHP+TP K KYSRRA+DGL+K
Sbjct: 186 ESDPAILSRRQKQIDYGKNTAAYERYLEMVPRPQRTRDHPRTPNKHGKYSRRAFDGLVKI 245
Query: 89 WRSRLHFWDPPNENGE 104
WR LH++DPP G+
Sbjct: 246 WRKSLHYYDPPTATGK 261
>gi|170045215|ref|XP_001850212.1| histone RNA hairpin-binding protein [Culex quinquefasciatus]
gi|167868199|gb|EDS31582.1| histone RNA hairpin-binding protein [Culex quinquefasciatus]
Length = 274
Score = 111 bits (277), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 47/73 (64%), Positives = 59/73 (80%)
Query: 26 LAYETDPAILLRRQKQIDFGKNTVGYDRYCSMVKREDRTKDHPKTPPKELKYSRRAWDGL 85
+ YE D +L+RRQKQID+GKNT+GY+ Y V RE RTK+HPKTPPK +KYSRRAWDGL
Sbjct: 199 VEYEKDIEVLVRRQKQIDYGKNTLGYENYQRQVPREQRTKEHPKTPPKHIKYSRRAWDGL 258
Query: 86 IKSWRSRLHFWDP 98
++ WR +LH +DP
Sbjct: 259 VRVWRKKLHCFDP 271
>gi|242013418|ref|XP_002427404.1| histone RNA hairpin-binding protein, putative [Pediculus humanus
corporis]
gi|212511781|gb|EEB14666.1| histone RNA hairpin-binding protein, putative [Pediculus humanus
corporis]
Length = 217
Score = 110 bits (276), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 50/71 (70%), Positives = 56/71 (78%)
Query: 27 AYETDPAILLRRQKQIDFGKNTVGYDRYCSMVKREDRTKDHPKTPPKELKYSRRAWDGLI 86
+ ETDP +L RRQKQID+GKNT+GYDRY V RE+R HPKTPPK KYSRRAWDGLI
Sbjct: 120 SIETDPLVLARRQKQIDYGKNTLGYDRYIKSVPREERKNYHPKTPPKHNKYSRRAWDGLI 179
Query: 87 KSWRSRLHFWD 97
K WR +LH WD
Sbjct: 180 KVWRQQLHCWD 190
>gi|195070111|ref|XP_001997079.1| GH23223 [Drosophila grimshawi]
gi|193905621|gb|EDW04488.1| GH23223 [Drosophila grimshawi]
Length = 268
Score = 109 bits (272), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 47/72 (65%), Positives = 58/72 (80%)
Query: 29 ETDPAILLRRQKQIDFGKNTVGYDRYCSMVKREDRTKDHPKTPPKELKYSRRAWDGLIKS 88
E DPA+L RRQKQID+GKNT Y+RY V R +RT+DHP+TP K KYSRRA+DGL+K
Sbjct: 181 EGDPAVLSRRQKQIDYGKNTATYERYVDQVARNERTRDHPRTPNKYGKYSRRAFDGLVKI 240
Query: 89 WRSRLHFWDPPN 100
WR +LHF+DPP+
Sbjct: 241 WRKQLHFYDPPS 252
>gi|195553522|ref|XP_002076681.1| GD15074 [Drosophila simulans]
gi|194202292|gb|EDX15868.1| GD15074 [Drosophila simulans]
Length = 257
Score = 109 bits (272), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 53/96 (55%), Positives = 65/96 (67%), Gaps = 5/96 (5%)
Query: 6 RHNTNANKKSGPGTPGSGKKLAYETDPAILLRRQKQIDFGKNTVGYDRYCSMVKREDRTK 65
+H+ NANK SG DPAIL RRQKQID+GKNT Y+RY MV + +RT+
Sbjct: 152 QHSRNANKSGY-----SGPTRRETADPAILSRRQKQIDYGKNTAAYERYVEMVPKAERTR 206
Query: 66 DHPKTPPKELKYSRRAWDGLIKSWRSRLHFWDPPNE 101
DHP+TP K KYSRRA+DGL+K WR LH +DPP +
Sbjct: 207 DHPRTPNKHGKYSRRAFDGLVKIWRKSLHIYDPPTQ 242
>gi|195070115|ref|XP_001997081.1| GH23225 [Drosophila grimshawi]
gi|193905623|gb|EDW04490.1| GH23225 [Drosophila grimshawi]
Length = 268
Score = 108 bits (271), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 51/87 (58%), Positives = 62/87 (71%), Gaps = 1/87 (1%)
Query: 29 ETDPAILLRRQKQIDFGKNTVGYDRYCSMVKREDRTKDHPKTPPKELKYSRRAWDGLIKS 88
E DPA+L RRQKQID+GKNT Y+RY V R RT+DHP+TP K KYSRRA+DGL+K
Sbjct: 181 EGDPAVLSRRQKQIDYGKNTAAYERYVDQVARNVRTRDHPRTPNKYGKYSRRAFDGLVKI 240
Query: 89 WRSRLHFWDPPNENGEPNSLLLDEDDD 115
WR +LHF+DPP+ + S D D D
Sbjct: 241 WRKQLHFYDPPSAK-DARSAEADSDSD 266
>gi|195112362|ref|XP_002000743.1| GI22353 [Drosophila mojavensis]
gi|193917337|gb|EDW16204.1| GI22353 [Drosophila mojavensis]
Length = 252
Score = 108 bits (271), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 51/87 (58%), Positives = 62/87 (71%), Gaps = 1/87 (1%)
Query: 29 ETDPAILLRRQKQIDFGKNTVGYDRYCSMVKREDRTKDHPKTPPKELKYSRRAWDGLIKS 88
E DPAIL RRQKQID+GKNT Y+RY V ++DRT+DHP+TP K KYSRRA+DGL+K
Sbjct: 165 EADPAILSRRQKQIDYGKNTAAYERYVETVPKKDRTRDHPRTPNKFGKYSRRAFDGLVKI 224
Query: 89 WRSRLHFWDPPNENGEPNSLLLDEDDD 115
WR +LH +DPP N+ D D D
Sbjct: 225 WRKQLHVYDPPAAKAS-NTCEADSDSD 250
>gi|195061861|ref|XP_001996085.1| GH14009 [Drosophila grimshawi]
gi|193891877|gb|EDV90743.1| GH14009 [Drosophila grimshawi]
Length = 268
Score = 108 bits (270), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 47/72 (65%), Positives = 57/72 (79%)
Query: 29 ETDPAILLRRQKQIDFGKNTVGYDRYCSMVKREDRTKDHPKTPPKELKYSRRAWDGLIKS 88
E DPA+L RRQKQID+GKNT Y+RY V R RT+DHP+TP K KYSRRA+DGL+K
Sbjct: 181 EGDPAVLSRRQKQIDYGKNTAAYERYVDQVARNVRTRDHPRTPNKYGKYSRRAFDGLVKI 240
Query: 89 WRSRLHFWDPPN 100
WR +LHF+DPP+
Sbjct: 241 WRKQLHFYDPPS 252
>gi|10334683|gb|AAG16723.1|AF186594_1 histone mRNA stem-loop binding protein [Drosophila melanogaster]
Length = 276
Score = 108 bits (270), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 47/73 (64%), Positives = 58/73 (79%)
Query: 29 ETDPAILLRRQKQIDFGKNTVGYDRYCSMVKREDRTKDHPKTPPKELKYSRRAWDGLIKS 88
E DPAIL RRQKQID+GKNT Y+RY MV +++RT+DHP+TP K KYSRRA+DGL+K
Sbjct: 189 EADPAILSRRQKQIDYGKNTAAYERYVEMVPKDERTRDHPRTPNKYGKYSRRAFDGLVKI 248
Query: 89 WRSRLHFWDPPNE 101
WR LH +DPP +
Sbjct: 249 WRKSLHIYDPPTQ 261
>gi|17137748|ref|NP_477480.1| Stem-loop binding protein [Drosophila melanogaster]
gi|9789800|sp|Q9VAN6.1|SLBP_DROME RecName: Full=Histone RNA hairpin-binding protein; AltName:
Full=Histone stem-loop-binding protein
gi|8050817|gb|AAF71752.1|AF258617_1 replication-associated histone mRNA stem loop-binding protein
[Drosophila melanogaster]
gi|7301755|gb|AAF56867.1| Stem-loop binding protein [Drosophila melanogaster]
gi|19528597|gb|AAL90413.1| RH47057p [Drosophila melanogaster]
gi|21430036|gb|AAM50696.1| GM06606p [Drosophila melanogaster]
gi|220942780|gb|ACL83933.1| Slbp-PA [synthetic construct]
Length = 276
Score = 108 bits (270), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 47/73 (64%), Positives = 58/73 (79%)
Query: 29 ETDPAILLRRQKQIDFGKNTVGYDRYCSMVKREDRTKDHPKTPPKELKYSRRAWDGLIKS 88
E DPAIL RRQKQID+GKNT Y+RY MV +++RT+DHP+TP K KYSRRA+DGL+K
Sbjct: 189 EADPAILSRRQKQIDYGKNTAAYERYVEMVPKDERTRDHPRTPNKYGKYSRRAFDGLVKI 248
Query: 89 WRSRLHFWDPPNE 101
WR LH +DPP +
Sbjct: 249 WRKSLHIYDPPTQ 261
>gi|270013872|gb|EFA10320.1| hypothetical protein TcasGA2_TC012536 [Tribolium castaneum]
Length = 239
Score = 108 bits (270), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 52/96 (54%), Positives = 65/96 (67%), Gaps = 2/96 (2%)
Query: 3 RATRHNTNANKKSGPGTPGSGKKLAYETDPAILLRRQKQIDFGKNTVGYDRYCSMVKRED 62
+ + N + N K+ P KK+ ETDP +L RRQKQID+GKNT+GYD Y +V R+
Sbjct: 142 KVSSLNLDENGKTPPR--KKSKKIELETDPEVLRRRQKQIDYGKNTIGYDEYTKLVPRQQ 199
Query: 63 RTKDHPKTPPKELKYSRRAWDGLIKSWRSRLHFWDP 98
R D P+TP K LKYSRR WDGLIK WR +LH +DP
Sbjct: 200 RKSDDPQTPNKFLKYSRRGWDGLIKQWRLKLHKYDP 235
>gi|194744473|ref|XP_001954718.1| GF18411 [Drosophila ananassae]
gi|190627755|gb|EDV43279.1| GF18411 [Drosophila ananassae]
Length = 272
Score = 107 bits (268), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 45/73 (61%), Positives = 58/73 (79%)
Query: 29 ETDPAILLRRQKQIDFGKNTVGYDRYCSMVKREDRTKDHPKTPPKELKYSRRAWDGLIKS 88
E +PA+L RRQKQID+GKNT Y+RY MV + +RT++HP+TP K KYSRRA+DGL+K
Sbjct: 186 EANPAVLARRQKQIDYGKNTAAYERYVEMVPKAERTREHPRTPNKYGKYSRRAFDGLVKI 245
Query: 89 WRSRLHFWDPPNE 101
WR LHF+DPP +
Sbjct: 246 WRKSLHFYDPPTQ 258
>gi|195341139|ref|XP_002037169.1| GM12257 [Drosophila sechellia]
gi|194131285|gb|EDW53328.1| GM12257 [Drosophila sechellia]
Length = 276
Score = 107 bits (267), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 46/73 (63%), Positives = 57/73 (78%)
Query: 29 ETDPAILLRRQKQIDFGKNTVGYDRYCSMVKREDRTKDHPKTPPKELKYSRRAWDGLIKS 88
E DPAIL RRQKQID+GKNT Y+RY MV + +RT++HP+TP K KYSRRA+DGL+K
Sbjct: 189 EADPAILSRRQKQIDYGKNTAAYERYVEMVPKAERTREHPRTPNKHGKYSRRAFDGLVKI 248
Query: 89 WRSRLHFWDPPNE 101
WR LH +DPP +
Sbjct: 249 WRKSLHIYDPPTQ 261
>gi|195503358|ref|XP_002098618.1| GE10470 [Drosophila yakuba]
gi|194184719|gb|EDW98330.1| GE10470 [Drosophila yakuba]
Length = 273
Score = 107 bits (266), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 46/73 (63%), Positives = 57/73 (78%)
Query: 29 ETDPAILLRRQKQIDFGKNTVGYDRYCSMVKREDRTKDHPKTPPKELKYSRRAWDGLIKS 88
E DPA+L RRQKQID+GKNT Y+RY MV + +RT+DHP+TP K KYSRRA+DGL+K
Sbjct: 186 EADPAVLSRRQKQIDYGKNTAAYERYLEMVPKTERTRDHPRTPNKYGKYSRRAFDGLVKI 245
Query: 89 WRSRLHFWDPPNE 101
WR LH +DPP +
Sbjct: 246 WRKSLHIYDPPTQ 258
>gi|194906474|ref|XP_001981382.1| GG12032 [Drosophila erecta]
gi|190656020|gb|EDV53252.1| GG12032 [Drosophila erecta]
Length = 274
Score = 105 bits (261), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 45/71 (63%), Positives = 56/71 (78%)
Query: 31 DPAILLRRQKQIDFGKNTVGYDRYCSMVKREDRTKDHPKTPPKELKYSRRAWDGLIKSWR 90
DPA+L RRQKQID+GKNT Y+RY MV + +RT+DHP+TP K KYSRRA+DGL+K WR
Sbjct: 189 DPAVLSRRQKQIDYGKNTAAYERYLEMVPKTERTRDHPRTPNKYGKYSRRAFDGLVKIWR 248
Query: 91 SRLHFWDPPNE 101
LH +DPP +
Sbjct: 249 KSLHIYDPPTQ 259
>gi|195144122|ref|XP_002013045.1| GL23600 [Drosophila persimilis]
gi|194101988|gb|EDW24031.1| GL23600 [Drosophila persimilis]
Length = 269
Score = 102 bits (254), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 44/73 (60%), Positives = 56/73 (76%)
Query: 29 ETDPAILLRRQKQIDFGKNTVGYDRYCSMVKREDRTKDHPKTPPKELKYSRRAWDGLIKS 88
E DPA+L RRQKQID+GKNT Y+RY MV + R+++ P+TP K KYSRRA+DGL+K
Sbjct: 183 EADPAVLSRRQKQIDYGKNTAAYERYTEMVPKTTRSREDPRTPNKYGKYSRRAFDGLVKI 242
Query: 89 WRSRLHFWDPPNE 101
WR LHF+DPP +
Sbjct: 243 WRKSLHFYDPPTQ 255
>gi|125774087|ref|XP_001358302.1| GA11260 [Drosophila pseudoobscura pseudoobscura]
gi|54638038|gb|EAL27440.1| GA11260 [Drosophila pseudoobscura pseudoobscura]
Length = 269
Score = 102 bits (253), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 44/73 (60%), Positives = 56/73 (76%)
Query: 29 ETDPAILLRRQKQIDFGKNTVGYDRYCSMVKREDRTKDHPKTPPKELKYSRRAWDGLIKS 88
E DPA+L RRQKQID+GKNT Y+RY MV + R+++ P+TP K KYSRRA+DGL+K
Sbjct: 183 EADPAVLSRRQKQIDYGKNTAAYERYTEMVPKATRSREDPRTPNKYGKYSRRAFDGLVKI 242
Query: 89 WRSRLHFWDPPNE 101
WR LHF+DPP +
Sbjct: 243 WRKSLHFYDPPTQ 255
>gi|405967977|gb|EKC33086.1| Histone RNA hairpin-binding protein [Crassostrea gigas]
Length = 269
Score = 100 bits (250), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 50/105 (47%), Positives = 66/105 (62%), Gaps = 4/105 (3%)
Query: 18 GTPGSGKKLAYETDPAILLRRQKQIDFGKNTVGYDRYCSMVKREDRTKDHPKTPPKELKY 77
G +K E DPA+L RRQK ID+GKNT+ YDRY +++ + RTK HP+TP K K
Sbjct: 111 GNDSKRQKFEEERDPAVLDRRQKAIDYGKNTLAYDRYITVIPKSQRTKTHPRTPNKYRKC 170
Query: 78 SRRAWDGLIKSWRSRLHFWDPPNENGEP----NSLLLDEDDDISS 118
SRR+WD ++ WR LH WDPP+ +G P N +LD D+ S
Sbjct: 171 SRRSWDSQVRLWRISLHQWDPPSADGTPAPRRNPSVLDTSDESDS 215
>gi|195399964|ref|XP_002058589.1| GJ14235 [Drosophila virilis]
gi|194142149|gb|EDW58557.1| GJ14235 [Drosophila virilis]
Length = 251
Score = 99.4 bits (246), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 48/88 (54%), Positives = 60/88 (68%), Gaps = 3/88 (3%)
Query: 31 DPAILLRRQKQIDFGKNTVGYDRYCSMVKREDRTKDHPKTPPKELKYSRRAWDGLIKSWR 90
DP IL RRQKQID+GKNT Y+RY V + +RT++HP+TP K KYSRRA+DGL+K WR
Sbjct: 166 DPEILSRRQKQIDYGKNTAAYERYIENVPKNERTREHPRTPNKYGKYSRRAFDGLVKIWR 225
Query: 91 SRLHFWDPPNENGEPNSLLLDEDDDISS 118
+LH +DPP NS + D D S
Sbjct: 226 KQLHIYDPPTAK---NSRTCEADSDSDS 250
>gi|391344284|ref|XP_003746431.1| PREDICTED: uncharacterized protein LOC100900359 [Metaseiulus
occidentalis]
Length = 158
Score = 98.6 bits (244), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 46/85 (54%), Positives = 59/85 (69%)
Query: 13 KKSGPGTPGSGKKLAYETDPAILLRRQKQIDFGKNTVGYDRYCSMVKREDRTKDHPKTPP 72
K+ G +G++ ETDP +L RRQKQI+FGK+T GY RY +V R+ RT HP+TP
Sbjct: 72 KRKREGATKAGREDRLETDPEVLARRQKQINFGKSTEGYKRYIELVARDKRTSCHPQTPQ 131
Query: 73 KELKYSRRAWDGLIKSWRSRLHFWD 97
KELKYSRR+WD +K WR LH +D
Sbjct: 132 KELKYSRRSWDMQVKLWRRALHVYD 156
>gi|119602986|gb|EAW82580.1| stem-loop (histone) binding protein, isoform CRA_d [Homo sapiens]
gi|193787481|dbj|BAG52687.1| unnamed protein product [Homo sapiens]
Length = 187
Score = 98.6 bits (244), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 46/77 (59%), Positives = 55/77 (71%), Gaps = 1/77 (1%)
Query: 28 YETDPAILLRRQKQIDFGKNTVGYDRYCSMVKREDRTKD-HPKTPPKELKYSRRAWDGLI 86
+ETD ++L+RRQKQI++GKNT+ YDRY V R R HPKTP K KYSRR+WD I
Sbjct: 45 FETDESVLMRRQKQINYGKNTIAYDRYIKEVPRHLRQPGIHPKTPNKFKKYSRRSWDQQI 104
Query: 87 KSWRSRLHFWDPPNENG 103
K W+ LHFWDPP E G
Sbjct: 105 KLWKVALHFWDPPAEEG 121
>gi|357619206|gb|EHJ71876.1| putative replication-associated histone mRNA stem loop-binding
protein [Danaus plexippus]
Length = 146
Score = 98.6 bits (244), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 47/76 (61%), Positives = 54/76 (71%)
Query: 22 SGKKLAYETDPAILLRRQKQIDFGKNTVGYDRYCSMVKREDRTKDHPKTPPKELKYSRRA 81
+ K + ETDP L RRQKQID+GKNTVGY Y V + RTKDHPKTP K KYSRR+
Sbjct: 56 TKKVIELETDPTTLQRRQKQIDYGKNTVGYHNYVKKVPIDQRTKDHPKTPDKYTKYSRRS 115
Query: 82 WDGLIKSWRSRLHFWD 97
WD LIK WR +LH +D
Sbjct: 116 WDMLIKLWRKKLHEYD 131
>gi|444302268|pdb|4HXH|C Chain C, Structure Of Mrna Stem-loop, Human Stem-loop Binding
Protein And 3'hexo Ternary Complex
Length = 120
Score = 98.2 bits (243), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 48/84 (57%), Positives = 57/84 (67%), Gaps = 1/84 (1%)
Query: 21 GSGKKLAYETDPAILLRRQKQIDFGKNTVGYDRYCSMVKREDRTKD-HPKTPPKELKYSR 79
GS +ETD ++L+RRQKQI++GKNT+ YDRY V R R HPKTP K KYSR
Sbjct: 18 GSHMPADFETDESVLMRRQKQINYGKNTIAYDRYIKEVPRHLRQPGIHPKTPNKFKKYSR 77
Query: 80 RAWDGLIKSWRSRLHFWDPPNENG 103
R+WD IK W+ LHFWDPP E G
Sbjct: 78 RSWDQQIKLWKVALHFWDPPAEEG 101
>gi|355570062|gb|EHH25580.1| hypothetical protein EGK_21440, partial [Macaca mulatta]
gi|355744808|gb|EHH49433.1| hypothetical protein EGM_00066, partial [Macaca fascicularis]
Length = 219
Score = 98.2 bits (243), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 46/77 (59%), Positives = 55/77 (71%), Gaps = 1/77 (1%)
Query: 28 YETDPAILLRRQKQIDFGKNTVGYDRYCSMVKREDRTKD-HPKTPPKELKYSRRAWDGLI 86
+ETD ++L+RRQKQI++GKNT+ YDRY V R R HPKTP K KYSRR+WD I
Sbjct: 77 FETDESVLMRRQKQINYGKNTIAYDRYIKEVPRHLRQPGIHPKTPNKFKKYSRRSWDQQI 136
Query: 87 KSWRSRLHFWDPPNENG 103
K W+ LHFWDPP E G
Sbjct: 137 KLWKVALHFWDPPAEEG 153
>gi|148235815|ref|NP_001085875.1| MGC80972 protein [Xenopus laevis]
gi|49118473|gb|AAH73461.1| MGC80972 protein [Xenopus laevis]
Length = 254
Score = 98.2 bits (243), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 49/95 (51%), Positives = 61/95 (64%), Gaps = 1/95 (1%)
Query: 29 ETDPAILLRRQKQIDFGKNTVGYDRYCSMVKREDRTKD-HPKTPPKELKYSRRAWDGLIK 87
ETDPA++ RRQKQI++GKNT+ YDRY V R R + HP+TP K KYSRR+WD I+
Sbjct: 127 ETDPAVIARRQKQINYGKNTIAYDRYIKAVPRHLREPNVHPRTPSKFKKYSRRSWDQQIR 186
Query: 88 SWRSRLHFWDPPNENGEPNSLLLDEDDDISSLDSQ 122
WR LH WDPP E G ++ED + SQ
Sbjct: 187 LWRIALHQWDPPAEEGSDLQPFMEEDMICTETSSQ 221
>gi|119602985|gb|EAW82579.1| stem-loop (histone) binding protein, isoform CRA_c [Homo sapiens]
gi|193787201|dbj|BAG52407.1| unnamed protein product [Homo sapiens]
Length = 231
Score = 97.8 bits (242), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 46/77 (59%), Positives = 55/77 (71%), Gaps = 1/77 (1%)
Query: 28 YETDPAILLRRQKQIDFGKNTVGYDRYCSMVKREDRTKD-HPKTPPKELKYSRRAWDGLI 86
+ETD ++L+RRQKQI++GKNT+ YDRY V R R HPKTP K KYSRR+WD I
Sbjct: 89 FETDESVLMRRQKQINYGKNTIAYDRYIKEVPRHLRQPGIHPKTPNKFKKYSRRSWDQQI 148
Query: 87 KSWRSRLHFWDPPNENG 103
K W+ LHFWDPP E G
Sbjct: 149 KLWKVALHFWDPPAEEG 165
>gi|350535959|ref|NP_001233401.1| histone RNA hairpin-binding protein [Pan troglodytes]
gi|343962549|dbj|BAK62862.1| histone RNA hairpin-binding protein [Pan troglodytes]
gi|410216694|gb|JAA05566.1| stem-loop binding protein [Pan troglodytes]
gi|410248944|gb|JAA12439.1| stem-loop binding protein [Pan troglodytes]
gi|410298716|gb|JAA27958.1| stem-loop binding protein [Pan troglodytes]
gi|410350207|gb|JAA41707.1| stem-loop binding protein [Pan troglodytes]
Length = 270
Score = 97.4 bits (241), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 46/77 (59%), Positives = 55/77 (71%), Gaps = 1/77 (1%)
Query: 28 YETDPAILLRRQKQIDFGKNTVGYDRYCSMVKREDRTKD-HPKTPPKELKYSRRAWDGLI 86
+ETD ++L+RRQKQI++GKNT+ YDRY V R R HPKTP K KYSRR+WD I
Sbjct: 128 FETDESVLMRRQKQINYGKNTIAYDRYIKEVPRHLRQPGIHPKTPNKFKKYSRRSWDQQI 187
Query: 87 KSWRSRLHFWDPPNENG 103
K W+ LHFWDPP E G
Sbjct: 188 KLWKVALHFWDPPAEEG 204
>gi|395734669|ref|XP_002814551.2| PREDICTED: LOW QUALITY PROTEIN: histone RNA hairpin-binding protein
[Pongo abelii]
Length = 269
Score = 97.4 bits (241), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 46/77 (59%), Positives = 55/77 (71%), Gaps = 1/77 (1%)
Query: 28 YETDPAILLRRQKQIDFGKNTVGYDRYCSMVKREDRTKD-HPKTPPKELKYSRRAWDGLI 86
+ETD ++L+RRQKQI++GKNT+ YDRY V R R HPKTP K KYSRR+WD I
Sbjct: 127 FETDESVLMRRQKQINYGKNTIAYDRYIKEVPRHLRQPGIHPKTPNKFKKYSRRSWDQQI 186
Query: 87 KSWRSRLHFWDPPNENG 103
K W+ LHFWDPP E G
Sbjct: 187 KLWKVALHFWDPPAEEG 203
>gi|397483586|ref|XP_003812980.1| PREDICTED: histone RNA hairpin-binding protein isoform 1 [Pan
paniscus]
Length = 270
Score = 97.4 bits (241), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 46/77 (59%), Positives = 55/77 (71%), Gaps = 1/77 (1%)
Query: 28 YETDPAILLRRQKQIDFGKNTVGYDRYCSMVKREDRTKD-HPKTPPKELKYSRRAWDGLI 86
+ETD ++L+RRQKQI++GKNT+ YDRY V R R HPKTP K KYSRR+WD I
Sbjct: 128 FETDESVLMRRQKQINYGKNTIAYDRYIKEVPRHLRQPGIHPKTPNKFKKYSRRSWDQQI 187
Query: 87 KSWRSRLHFWDPPNENG 103
K W+ LHFWDPP E G
Sbjct: 188 KLWKVALHFWDPPAEEG 204
>gi|345321195|ref|XP_001515610.2| PREDICTED: histone RNA hairpin-binding protein-like, partial
[Ornithorhynchus anatinus]
Length = 213
Score = 97.4 bits (241), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 51/99 (51%), Positives = 65/99 (65%), Gaps = 4/99 (4%)
Query: 29 ETDPAILLRRQKQIDFGKNTVGYDRYCSMVKREDRTKD-HPKTPPKELKYSRRAWDGLIK 87
ETD ++L+RRQKQI++GKNT+ YDRY V R R HPKTP K KYSRR+WD IK
Sbjct: 68 ETDESVLMRRQKQINYGKNTIAYDRYIKEVPRHLRQPGVHPKTPNKFKKYSRRSWDQQIK 127
Query: 88 SWRSRLHFWDPPNENGEPNSLLLDEDDDISSLDSQSVDS 126
W+ LHFWDPP E N L D+ ++++SV+S
Sbjct: 128 LWKVALHFWDPPAEG---NDLQDISPVDLGEMETESVES 163
>gi|193787645|dbj|BAG52851.1| unnamed protein product [Homo sapiens]
Length = 270
Score = 97.4 bits (241), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 46/77 (59%), Positives = 55/77 (71%), Gaps = 1/77 (1%)
Query: 28 YETDPAILLRRQKQIDFGKNTVGYDRYCSMVKREDRTKD-HPKTPPKELKYSRRAWDGLI 86
+ETD ++L+RRQKQI++GKNT+ YDRY V R R HPKTP K KYSRR+WD I
Sbjct: 128 FETDKSVLMRRQKQINYGKNTIAYDRYIKEVPRHLRQPGIHPKTPNKFKKYSRRSWDQQI 187
Query: 87 KSWRSRLHFWDPPNENG 103
K W+ LHFWDPP E G
Sbjct: 188 KLWKVALHFWDPPAEEG 204
>gi|5729862|ref|NP_006518.1| histone RNA hairpin-binding protein [Homo sapiens]
gi|332259932|ref|XP_003279037.1| PREDICTED: histone RNA hairpin-binding protein isoform 1 [Nomascus
leucogenys]
gi|426343589|ref|XP_004038377.1| PREDICTED: histone RNA hairpin-binding protein isoform 1 [Gorilla
gorilla gorilla]
gi|9789785|sp|Q14493.1|SLBP_HUMAN RecName: Full=Histone RNA hairpin-binding protein; AltName:
Full=Histone stem-loop-binding protein
gi|1279474|emb|CAA94918.1| histone RNA hairpin-binding protein [Homo sapiens]
gi|1732077|gb|AAB97091.1| histone stem-loop binding protein [Homo sapiens]
gi|15928884|gb|AAH14908.1| Stem-loop binding protein [Homo sapiens]
gi|16041673|gb|AAH15703.1| Stem-loop binding protein [Homo sapiens]
gi|30583705|gb|AAP36101.1| stem-loop (histone) binding protein [Homo sapiens]
gi|61360993|gb|AAX41968.1| stem-loop binding protein [synthetic construct]
gi|61360999|gb|AAX41969.1| stem-loop binding protein [synthetic construct]
gi|119602983|gb|EAW82577.1| stem-loop (histone) binding protein, isoform CRA_b [Homo sapiens]
gi|119602984|gb|EAW82578.1| stem-loop (histone) binding protein, isoform CRA_b [Homo sapiens]
gi|123983110|gb|ABM83296.1| stem-loop (histone) binding protein [synthetic construct]
gi|123997807|gb|ABM86505.1| stem-loop (histone) binding protein [synthetic construct]
gi|189055019|dbj|BAG38003.1| unnamed protein product [Homo sapiens]
Length = 270
Score = 97.4 bits (241), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 46/77 (59%), Positives = 55/77 (71%), Gaps = 1/77 (1%)
Query: 28 YETDPAILLRRQKQIDFGKNTVGYDRYCSMVKREDRTKD-HPKTPPKELKYSRRAWDGLI 86
+ETD ++L+RRQKQI++GKNT+ YDRY V R R HPKTP K KYSRR+WD I
Sbjct: 128 FETDESVLMRRQKQINYGKNTIAYDRYIKEVPRHLRQPGIHPKTPNKFKKYSRRSWDQQI 187
Query: 87 KSWRSRLHFWDPPNENG 103
K W+ LHFWDPP E G
Sbjct: 188 KLWKVALHFWDPPAEEG 204
>gi|383409787|gb|AFH28107.1| histone RNA hairpin-binding protein [Macaca mulatta]
gi|384942290|gb|AFI34750.1| histone RNA hairpin-binding protein [Macaca mulatta]
gi|387541074|gb|AFJ71164.1| histone RNA hairpin-binding protein [Macaca mulatta]
Length = 270
Score = 97.4 bits (241), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 46/77 (59%), Positives = 55/77 (71%), Gaps = 1/77 (1%)
Query: 28 YETDPAILLRRQKQIDFGKNTVGYDRYCSMVKREDRTKD-HPKTPPKELKYSRRAWDGLI 86
+ETD ++L+RRQKQI++GKNT+ YDRY V R R HPKTP K KYSRR+WD I
Sbjct: 128 FETDESVLMRRQKQINYGKNTIAYDRYIKEVPRHLRQPGIHPKTPNKFKKYSRRSWDQQI 187
Query: 87 KSWRSRLHFWDPPNENG 103
K W+ LHFWDPP E G
Sbjct: 188 KLWKVALHFWDPPAEEG 204
>gi|402852485|ref|XP_003890952.1| PREDICTED: histone RNA hairpin-binding protein isoform 1 [Papio
anubis]
Length = 351
Score = 97.4 bits (241), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 46/77 (59%), Positives = 55/77 (71%), Gaps = 1/77 (1%)
Query: 28 YETDPAILLRRQKQIDFGKNTVGYDRYCSMVKREDRTKD-HPKTPPKELKYSRRAWDGLI 86
+ETD ++L+RRQKQI++GKNT+ YDRY V R R HPKTP K KYSRR+WD I
Sbjct: 209 FETDESVLMRRQKQINYGKNTIAYDRYIKEVPRHLRQPGIHPKTPNKFKKYSRRSWDQQI 268
Query: 87 KSWRSRLHFWDPPNENG 103
K W+ LHFWDPP E G
Sbjct: 269 KLWKVALHFWDPPAEEG 285
>gi|380800655|gb|AFE72203.1| histone RNA hairpin-binding protein, partial [Macaca mulatta]
Length = 266
Score = 97.1 bits (240), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 46/77 (59%), Positives = 55/77 (71%), Gaps = 1/77 (1%)
Query: 28 YETDPAILLRRQKQIDFGKNTVGYDRYCSMVKREDRTKD-HPKTPPKELKYSRRAWDGLI 86
+ETD ++L+RRQKQI++GKNT+ YDRY V R R HPKTP K KYSRR+WD I
Sbjct: 124 FETDESVLMRRQKQINYGKNTIAYDRYIKEVPRHLRQPGIHPKTPNKFKKYSRRSWDQQI 183
Query: 87 KSWRSRLHFWDPPNENG 103
K W+ LHFWDPP E G
Sbjct: 184 KLWKVALHFWDPPAEEG 200
>gi|332259934|ref|XP_003279038.1| PREDICTED: histone RNA hairpin-binding protein isoform 2 [Nomascus
leucogenys]
gi|426343591|ref|XP_004038378.1| PREDICTED: histone RNA hairpin-binding protein isoform 2 [Gorilla
gorilla gorilla]
Length = 235
Score = 97.1 bits (240), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 46/77 (59%), Positives = 55/77 (71%), Gaps = 1/77 (1%)
Query: 28 YETDPAILLRRQKQIDFGKNTVGYDRYCSMVKREDRTKD-HPKTPPKELKYSRRAWDGLI 86
+ETD ++L+RRQKQI++GKNT+ YDRY V R R HPKTP K KYSRR+WD I
Sbjct: 93 FETDESVLMRRQKQINYGKNTIAYDRYIKEVPRHLRQPGIHPKTPNKFKKYSRRSWDQQI 152
Query: 87 KSWRSRLHFWDPPNENG 103
K W+ LHFWDPP E G
Sbjct: 153 KLWKVALHFWDPPAEEG 169
>gi|296197029|ref|XP_002746094.1| PREDICTED: histone RNA hairpin-binding protein isoform 1
[Callithrix jacchus]
Length = 270
Score = 97.1 bits (240), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 46/77 (59%), Positives = 55/77 (71%), Gaps = 1/77 (1%)
Query: 28 YETDPAILLRRQKQIDFGKNTVGYDRYCSMVKREDRTKD-HPKTPPKELKYSRRAWDGLI 86
+ETD ++L+RRQKQI++GKNT+ YDRY V R R HPKTP K KYSRR+WD I
Sbjct: 128 FETDESVLMRRQKQINYGKNTIAYDRYIKEVPRHLRQPGIHPKTPNKFKKYSRRSWDQQI 187
Query: 87 KSWRSRLHFWDPPNENG 103
K W+ LHFWDPP E G
Sbjct: 188 KLWKVALHFWDPPAEEG 204
>gi|397483588|ref|XP_003812981.1| PREDICTED: histone RNA hairpin-binding protein isoform 2 [Pan
paniscus]
Length = 235
Score = 97.1 bits (240), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 46/77 (59%), Positives = 55/77 (71%), Gaps = 1/77 (1%)
Query: 28 YETDPAILLRRQKQIDFGKNTVGYDRYCSMVKREDRTKD-HPKTPPKELKYSRRAWDGLI 86
+ETD ++L+RRQKQI++GKNT+ YDRY V R R HPKTP K KYSRR+WD I
Sbjct: 93 FETDESVLMRRQKQINYGKNTIAYDRYIKEVPRHLRQPGIHPKTPNKFKKYSRRSWDQQI 152
Query: 87 KSWRSRLHFWDPPNENG 103
K W+ LHFWDPP E G
Sbjct: 153 KLWKVALHFWDPPAEEG 169
>gi|296197031|ref|XP_002746095.1| PREDICTED: histone RNA hairpin-binding protein isoform 2
[Callithrix jacchus]
Length = 235
Score = 97.1 bits (240), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 46/77 (59%), Positives = 55/77 (71%), Gaps = 1/77 (1%)
Query: 28 YETDPAILLRRQKQIDFGKNTVGYDRYCSMVKREDRTKD-HPKTPPKELKYSRRAWDGLI 86
+ETD ++L+RRQKQI++GKNT+ YDRY V R R HPKTP K KYSRR+WD I
Sbjct: 93 FETDESVLMRRQKQINYGKNTIAYDRYIKEVPRHLRQPGIHPKTPNKFKKYSRRSWDQQI 152
Query: 87 KSWRSRLHFWDPPNENG 103
K W+ LHFWDPP E G
Sbjct: 153 KLWKVALHFWDPPAEEG 169
>gi|402852487|ref|XP_003890953.1| PREDICTED: histone RNA hairpin-binding protein isoform 2 [Papio
anubis]
Length = 235
Score = 97.1 bits (240), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 46/77 (59%), Positives = 55/77 (71%), Gaps = 1/77 (1%)
Query: 28 YETDPAILLRRQKQIDFGKNTVGYDRYCSMVKREDRTKD-HPKTPPKELKYSRRAWDGLI 86
+ETD ++L+RRQKQI++GKNT+ YDRY V R R HPKTP K KYSRR+WD I
Sbjct: 93 FETDESVLMRRQKQINYGKNTIAYDRYIKEVPRHLRQPGIHPKTPNKFKKYSRRSWDQQI 152
Query: 87 KSWRSRLHFWDPPNENG 103
K W+ LHFWDPP E G
Sbjct: 153 KLWKVALHFWDPPAEEG 169
>gi|410913329|ref|XP_003970141.1| PREDICTED: histone RNA hairpin-binding protein-like [Takifugu
rubripes]
Length = 238
Score = 97.1 bits (240), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 62/133 (46%), Positives = 75/133 (56%), Gaps = 16/133 (12%)
Query: 29 ETDPAILLRRQKQIDFGKNTVGYDRYCSMVKREDRTKD-HPKTPPKELKYSRRAWDGLIK 87
ETD +LLRRQKQI++GKNT+ YDRY V + R HPKTP K KYSRR+WD IK
Sbjct: 96 ETDETVLLRRQKQINYGKNTLAYDRYIKEVPKHMRQPGVHPKTPNKFRKYSRRSWDQQIK 155
Query: 88 SWRSRLHFWDPPNENGEPNS------LLLDEDDDISSLDSQSVDSLPCTPIQEWKRRVRA 141
W+ +LH WDPP E G+ + L LD+ DI LD + C P V
Sbjct: 156 LWKVKLHAWDPPAEEGQDGATDSIDELGLDDIMDI-ELDFPVLSDPSCAPAS-----VNV 209
Query: 142 KRESLSEDEEEDC 154
R S+ EEEDC
Sbjct: 210 HRISV---EEEDC 219
>gi|403286825|ref|XP_003934672.1| PREDICTED: histone RNA hairpin-binding protein [Saimiri boliviensis
boliviensis]
Length = 187
Score = 96.7 bits (239), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 45/77 (58%), Positives = 55/77 (71%), Gaps = 1/77 (1%)
Query: 28 YETDPAILLRRQKQIDFGKNTVGYDRYCSMVKREDRTKD-HPKTPPKELKYSRRAWDGLI 86
+ETD ++L+RRQKQI++GKNT+ YDRY V R R HPKTP K KYSRR+WD I
Sbjct: 45 FETDESVLMRRQKQINYGKNTIAYDRYIKEVPRHLRQPGIHPKTPNKFKKYSRRSWDQQI 104
Query: 87 KSWRSRLHFWDPPNENG 103
K W+ LHFWDPP + G
Sbjct: 105 KLWKVALHFWDPPADEG 121
>gi|301778095|ref|XP_002924464.1| PREDICTED: histone RNA hairpin-binding protein-like [Ailuropoda
melanoleuca]
Length = 233
Score = 96.7 bits (239), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 48/84 (57%), Positives = 56/84 (66%), Gaps = 1/84 (1%)
Query: 21 GSGKKLAYETDPAILLRRQKQIDFGKNTVGYDRYCSMVKREDRTKD-HPKTPPKELKYSR 79
GS ETD ++L+RRQKQI++GKNT+ YDRY V R R HPKTP K KYSR
Sbjct: 79 GSTVPADLETDESVLMRRQKQINYGKNTIAYDRYIKEVPRHLRQPGIHPKTPNKFKKYSR 138
Query: 80 RAWDGLIKSWRSRLHFWDPPNENG 103
R+WD IK W+ LHFWDPP E G
Sbjct: 139 RSWDQQIKLWKVALHFWDPPAEEG 162
>gi|355719574|gb|AES06646.1| stem-loop binding protein [Mustela putorius furo]
Length = 250
Score = 96.7 bits (239), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 48/84 (57%), Positives = 56/84 (66%), Gaps = 1/84 (1%)
Query: 21 GSGKKLAYETDPAILLRRQKQIDFGKNTVGYDRYCSMVKREDRTKD-HPKTPPKELKYSR 79
GS ETD ++L+RRQKQI++GKNT+ YDRY V R R HPKTP K KYSR
Sbjct: 97 GSTVPADLETDESVLMRRQKQINYGKNTIAYDRYIKEVPRHLRQPGIHPKTPNKFKKYSR 156
Query: 80 RAWDGLIKSWRSRLHFWDPPNENG 103
R+WD IK W+ LHFWDPP E G
Sbjct: 157 RSWDQQIKLWKVALHFWDPPAEEG 180
>gi|52345576|ref|NP_001004836.1| stem-loop binding protein [Xenopus (Silurana) tropicalis]
gi|49522027|gb|AAH74636.1| stem-loop binding protein [Xenopus (Silurana) tropicalis]
Length = 254
Score = 96.7 bits (239), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 52/100 (52%), Positives = 66/100 (66%), Gaps = 3/100 (3%)
Query: 29 ETDPAILLRRQKQIDFGKNTVGYDRYCSMVKREDRTKD-HPKTPPKELKYSRRAWDGLIK 87
ETDPA+L RRQKQI +GKNT+ YDRY V R R + HP+TP K KYSRR+WD I+
Sbjct: 127 ETDPAVLTRRQKQISYGKNTIAYDRYIKAVPRHLREPNVHPRTPNKFKKYSRRSWDQQIR 186
Query: 88 SWRSRLHFWDPPNENGEPNSLLLDEDDDISSLDSQSVDSL 127
WR LH WDPP E E + L ++D+ +++ S DSL
Sbjct: 187 LWRIALHQWDPPAE--EDSDLQPFTEEDMICVETSSQDSL 224
>gi|444722044|gb|ELW62748.1| Histone RNA hairpin-binding protein [Tupaia chinensis]
Length = 172
Score = 96.7 bits (239), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 46/76 (60%), Positives = 54/76 (71%), Gaps = 1/76 (1%)
Query: 29 ETDPAILLRRQKQIDFGKNTVGYDRYCSMVKREDRTKD-HPKTPPKELKYSRRAWDGLIK 87
ETD ++L+RRQKQI++GKNT+ YDRY V R R HPKTP K KYSRR+WD IK
Sbjct: 26 ETDESVLMRRQKQINYGKNTIAYDRYIKEVPRHLRQPGIHPKTPNKFKKYSRRSWDQQIK 85
Query: 88 SWRSRLHFWDPPNENG 103
W+ LHFWDPP E G
Sbjct: 86 LWKVALHFWDPPAEEG 101
>gi|348541357|ref|XP_003458153.1| PREDICTED: histone RNA hairpin-binding protein-like [Oreochromis
niloticus]
Length = 278
Score = 96.7 bits (239), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 50/96 (52%), Positives = 65/96 (67%), Gaps = 4/96 (4%)
Query: 29 ETDPAILLRRQKQIDFGKNTVGYDRYCSMVKREDRTKD-HPKTPPKELKYSRRAWDGLIK 87
ETD A+LLRRQKQI++GKNT+ YDRY V + R HPKTP K KYSRR+WD IK
Sbjct: 140 ETDEAVLLRRQKQINYGKNTLAYDRYIKEVPKHMRQPGVHPKTPNKFRKYSRRSWDQQIK 199
Query: 88 SWRSRLHFWDPPNENGEPNSLLLDED---DDISSLD 120
W+ +LH WDPP E G+ +L + E+ DD+ ++
Sbjct: 200 LWKVKLHAWDPPAEEGQDKTLDVVEELNLDDVMDIE 235
>gi|281343102|gb|EFB18686.1| hypothetical protein PANDA_013811 [Ailuropoda melanoleuca]
Length = 217
Score = 96.7 bits (239), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 48/84 (57%), Positives = 56/84 (66%), Gaps = 1/84 (1%)
Query: 21 GSGKKLAYETDPAILLRRQKQIDFGKNTVGYDRYCSMVKREDRTKD-HPKTPPKELKYSR 79
GS ETD ++L+RRQKQI++GKNT+ YDRY V R R HPKTP K KYSR
Sbjct: 63 GSTVPADLETDESVLMRRQKQINYGKNTIAYDRYIKEVPRHLRQPGIHPKTPNKFKKYSR 122
Query: 80 RAWDGLIKSWRSRLHFWDPPNENG 103
R+WD IK W+ LHFWDPP E G
Sbjct: 123 RSWDQQIKLWKVALHFWDPPAEEG 146
>gi|73951400|ref|XP_545928.2| PREDICTED: histone RNA hairpin-binding protein isoform 4 [Canis
lupus familiaris]
Length = 275
Score = 96.7 bits (239), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 50/92 (54%), Positives = 59/92 (64%), Gaps = 6/92 (6%)
Query: 13 KKSGPGTPGSGKKLAYETDPAILLRRQKQIDFGKNTVGYDRYCSMVKREDRTKD-HPKTP 71
K+ GP P ETD ++L+RRQKQI++GKNT+ YDRY V R R HPKTP
Sbjct: 118 KEVGPTVPAD-----LETDESVLMRRQKQINYGKNTIAYDRYIKEVPRHLRQPGIHPKTP 172
Query: 72 PKELKYSRRAWDGLIKSWRSRLHFWDPPNENG 103
K KYSRR+WD IK W+ LHFWDPP E G
Sbjct: 173 NKFKKYSRRSWDQQIKLWKVALHFWDPPAEEG 204
>gi|395857574|ref|XP_003801166.1| PREDICTED: histone RNA hairpin-binding protein isoform 1 [Otolemur
garnettii]
Length = 270
Score = 96.3 bits (238), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 45/77 (58%), Positives = 55/77 (71%), Gaps = 1/77 (1%)
Query: 28 YETDPAILLRRQKQIDFGKNTVGYDRYCSMVKREDRTKD-HPKTPPKELKYSRRAWDGLI 86
+ETD ++L+RRQKQI++GKNT+ YDRY V R R HPKTP K KYSRR+WD I
Sbjct: 128 FETDESVLMRRQKQINYGKNTIAYDRYIKEVPRHLRQPGIHPKTPNKFKKYSRRSWDQQI 187
Query: 87 KSWRSRLHFWDPPNENG 103
+ W+ LHFWDPP E G
Sbjct: 188 RLWKVALHFWDPPAEEG 204
>gi|395857576|ref|XP_003801167.1| PREDICTED: histone RNA hairpin-binding protein isoform 2 [Otolemur
garnettii]
Length = 235
Score = 96.3 bits (238), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 45/77 (58%), Positives = 55/77 (71%), Gaps = 1/77 (1%)
Query: 28 YETDPAILLRRQKQIDFGKNTVGYDRYCSMVKREDRTKD-HPKTPPKELKYSRRAWDGLI 86
+ETD ++L+RRQKQI++GKNT+ YDRY V R R HPKTP K KYSRR+WD I
Sbjct: 93 FETDESVLMRRQKQINYGKNTIAYDRYIKEVPRHLRQPGIHPKTPNKFKKYSRRSWDQQI 152
Query: 87 KSWRSRLHFWDPPNENG 103
+ W+ LHFWDPP E G
Sbjct: 153 RLWKVALHFWDPPAEEG 169
>gi|194209387|ref|XP_001488429.2| PREDICTED: histone RNA hairpin-binding protein-like [Equus
caballus]
Length = 222
Score = 96.3 bits (238), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 50/98 (51%), Positives = 64/98 (65%), Gaps = 3/98 (3%)
Query: 29 ETDPAILLRRQKQIDFGKNTVGYDRYCSMVKREDRTKD-HPKTPPKELKYSRRAWDGLIK 87
ETD ++L+RRQKQI++GKNT+ YDRY V R R HPKTP K KYSRR+WD I+
Sbjct: 76 ETDESVLMRRQKQINYGKNTIAYDRYIKEVPRHLRQPGIHPKTPNKFKKYSRRSWDQQIR 135
Query: 88 SWRSRLHFWDPPNENGEPNSLLLDEDDDISSLDSQSVD 125
W+ LHFWDPP E G L D+ ++++SVD
Sbjct: 136 LWKVALHFWDPPAEEG--CDLQEIHPVDLGEMETESVD 171
>gi|348571895|ref|XP_003471730.1| PREDICTED: histone RNA hairpin-binding protein-like [Cavia
porcellus]
Length = 264
Score = 96.3 bits (238), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 46/76 (60%), Positives = 54/76 (71%), Gaps = 1/76 (1%)
Query: 29 ETDPAILLRRQKQIDFGKNTVGYDRYCSMVKREDRTKD-HPKTPPKELKYSRRAWDGLIK 87
ETD ++L+RRQKQI++GKNT+ YDRY V R R HPKTP K KYSRR+WD IK
Sbjct: 118 ETDESVLMRRQKQINYGKNTIAYDRYIKEVPRHLRQPGIHPKTPNKFKKYSRRSWDQQIK 177
Query: 88 SWRSRLHFWDPPNENG 103
W+ LHFWDPP E G
Sbjct: 178 LWKVALHFWDPPAEEG 193
>gi|119602982|gb|EAW82576.1| stem-loop (histone) binding protein, isoform CRA_a [Homo sapiens]
Length = 182
Score = 95.9 bits (237), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 46/77 (59%), Positives = 55/77 (71%), Gaps = 1/77 (1%)
Query: 28 YETDPAILLRRQKQIDFGKNTVGYDRYCSMVKREDRTKD-HPKTPPKELKYSRRAWDGLI 86
+ETD ++L+RRQKQI++GKNT+ YDRY V R R HPKTP K KYSRR+WD I
Sbjct: 93 FETDESVLMRRQKQINYGKNTIAYDRYIKEVPRHLRQPGIHPKTPNKFKKYSRRSWDQQI 152
Query: 87 KSWRSRLHFWDPPNENG 103
K W+ LHFWDPP E G
Sbjct: 153 KLWKVALHFWDPPAEEG 169
>gi|334331662|ref|XP_001375607.2| PREDICTED: histone RNA hairpin-binding protein-like [Monodelphis
domestica]
Length = 295
Score = 95.5 bits (236), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 47/83 (56%), Positives = 55/83 (66%), Gaps = 1/83 (1%)
Query: 22 SGKKLAYETDPAILLRRQKQIDFGKNTVGYDRYCSMVKREDRTKD-HPKTPPKELKYSRR 80
S + ETD +L+RRQKQI++GKNT+ YDRY V R R HPKTP K KYSRR
Sbjct: 142 SAARAELETDENVLMRRQKQINYGKNTIAYDRYIKEVPRHLRQPGIHPKTPNKFKKYSRR 201
Query: 81 AWDGLIKSWRSRLHFWDPPNENG 103
+WD IK W+ LHFWDPP E G
Sbjct: 202 SWDQQIKLWKVALHFWDPPVEEG 224
>gi|148228718|ref|NP_001081826.1| histone RNA hairpin-binding protein [Xenopus laevis]
gi|9789782|sp|P79943.1|SLBP1_XENLA RecName: Full=Histone RNA hairpin-binding protein; AltName:
Full=Histone stem-loop-binding protein 1
gi|1732081|gb|AAC60342.1| histone stem-loop binding protein [Xenopus laevis]
gi|90112061|gb|AAI14223.1| SLBP protein [Xenopus laevis]
Length = 254
Score = 95.5 bits (236), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 48/95 (50%), Positives = 60/95 (63%), Gaps = 1/95 (1%)
Query: 29 ETDPAILLRRQKQIDFGKNTVGYDRYCSMVKREDRTKD-HPKTPPKELKYSRRAWDGLIK 87
ETDPA++ RRQKQI++GKNT+ YDRY V R R + HP+TP K KYSRR+WD I+
Sbjct: 127 ETDPAVITRRQKQINYGKNTIAYDRYIKAVPRHLREPNVHPRTPNKFKKYSRRSWDQQIR 186
Query: 88 SWRSRLHFWDPPNENGEPNSLLLDEDDDISSLDSQ 122
WR LH WDPP G ++ED + SQ
Sbjct: 187 LWRIALHQWDPPAAEGSDLQPFMEEDMVCTETSSQ 221
>gi|351704082|gb|EHB07001.1| Histone RNA hairpin-binding protein [Heterocephalus glaber]
Length = 310
Score = 95.5 bits (236), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 46/76 (60%), Positives = 54/76 (71%), Gaps = 1/76 (1%)
Query: 29 ETDPAILLRRQKQIDFGKNTVGYDRYCSMVKREDRTKD-HPKTPPKELKYSRRAWDGLIK 87
ETD ++L+RRQKQI++GKNT+ YDRY V R R HPKTP K KYSRR+WD IK
Sbjct: 121 ETDESVLMRRQKQINYGKNTIAYDRYIKEVPRHLRQPGIHPKTPNKFKKYSRRSWDQQIK 180
Query: 88 SWRSRLHFWDPPNENG 103
W+ LHFWDPP E G
Sbjct: 181 LWKVALHFWDPPAEEG 196
>gi|431897329|gb|ELK06591.1| Histone RNA hairpin-binding protein, partial [Pteropus alecto]
Length = 233
Score = 95.1 bits (235), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 46/76 (60%), Positives = 52/76 (68%), Gaps = 1/76 (1%)
Query: 29 ETDPAILLRRQKQIDFGKNTVGYDRYCSMVKREDRTKD-HPKTPPKELKYSRRAWDGLIK 87
ETD +L+RRQKQI +GKNT+ YDRY V R R HPKTP K KYSRR+WD IK
Sbjct: 87 ETDEGVLMRRQKQISYGKNTLAYDRYIKAVPRHLRQPGIHPKTPNKFKKYSRRSWDQQIK 146
Query: 88 SWRSRLHFWDPPNENG 103
W+ LHFWDPP E G
Sbjct: 147 LWKVALHFWDPPAEEG 162
>gi|432961064|ref|XP_004086556.1| PREDICTED: histone RNA hairpin-binding protein-like [Oryzias
latipes]
Length = 268
Score = 95.1 bits (235), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 51/91 (56%), Positives = 59/91 (64%), Gaps = 3/91 (3%)
Query: 27 AYETDPAILLRRQKQIDFGKNTVGYDRYCSMVKREDRTKD-HPKTPPKELKYSRRAWDGL 85
+ ETD +LLRRQKQI +GKNT+ YDRY V + R HPKTP K KYSRR+WD
Sbjct: 130 SLETDEGVLLRRQKQISYGKNTLAYDRYIREVPKHLRQPGIHPKTPNKFRKYSRRSWDQQ 189
Query: 86 IKSWRSRLHFWDPPNENG--EPNSLLLDEDD 114
IK WR +LH WDPP +NG E N LD D
Sbjct: 190 IKLWRVKLHAWDPPTDNGTQEDNEEQLDLGD 220
>gi|432114825|gb|ELK36563.1| Histone RNA hairpin-binding protein [Myotis davidii]
Length = 192
Score = 95.1 bits (235), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 46/76 (60%), Positives = 54/76 (71%), Gaps = 1/76 (1%)
Query: 29 ETDPAILLRRQKQIDFGKNTVGYDRYCSMVKREDRTKD-HPKTPPKELKYSRRAWDGLIK 87
ETD ++L+RRQKQI++GKNT+ YDRY V R R HPKTP K KYSRR+WD IK
Sbjct: 45 ETDESVLMRRQKQINYGKNTMAYDRYIREVPRHLRQPGIHPKTPNKFKKYSRRSWDQQIK 104
Query: 88 SWRSRLHFWDPPNENG 103
W+ LHFWDPP E G
Sbjct: 105 LWKVALHFWDPPTEEG 120
>gi|410958008|ref|XP_003985615.1| PREDICTED: histone RNA hairpin-binding protein [Felis catus]
Length = 218
Score = 95.1 bits (235), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 46/76 (60%), Positives = 54/76 (71%), Gaps = 1/76 (1%)
Query: 29 ETDPAILLRRQKQIDFGKNTVGYDRYCSMVKREDRTKD-HPKTPPKELKYSRRAWDGLIK 87
ETD ++L+RRQKQI++GKNT+ YDRY V R R HPKTP K KYSRR+WD IK
Sbjct: 72 ETDESVLMRRQKQINYGKNTIAYDRYIKEVPRHLRQPGIHPKTPNKFKKYSRRSWDQQIK 131
Query: 88 SWRSRLHFWDPPNENG 103
W+ LHFWDPP E G
Sbjct: 132 LWKVALHFWDPPPEEG 147
>gi|194374729|dbj|BAG62479.1| unnamed protein product [Homo sapiens]
Length = 235
Score = 94.7 bits (234), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 45/77 (58%), Positives = 54/77 (70%), Gaps = 1/77 (1%)
Query: 28 YETDPAILLRRQKQIDFGKNTVGYDRYCSMVKREDRTKD-HPKTPPKELKYSRRAWDGLI 86
+ETD ++L+RRQKQI++GKNT+ Y RY V R R HPKTP K KYSRR+WD I
Sbjct: 93 FETDESVLMRRQKQINYGKNTIAYGRYIKEVPRHLRQPGIHPKTPNKFKKYSRRSWDQQI 152
Query: 87 KSWRSRLHFWDPPNENG 103
K W+ LHFWDPP E G
Sbjct: 153 KLWKVALHFWDPPAEEG 169
>gi|344279229|ref|XP_003411392.1| PREDICTED: hypothetical protein LOC100674618 [Loxodonta africana]
Length = 530
Score = 94.7 bits (234), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 45/76 (59%), Positives = 54/76 (71%), Gaps = 1/76 (1%)
Query: 29 ETDPAILLRRQKQIDFGKNTVGYDRYCSMVKREDRTKD-HPKTPPKELKYSRRAWDGLIK 87
ETD ++L+RRQKQI++GKNT+ YDRY V R R HPKTP K KYSRR+WD I+
Sbjct: 404 ETDESVLMRRQKQINYGKNTIAYDRYIKEVPRHLRQPGVHPKTPNKFKKYSRRSWDQQIR 463
Query: 88 SWRSRLHFWDPPNENG 103
W+ LHFWDPP E G
Sbjct: 464 LWKVALHFWDPPAEEG 479
>gi|148235953|ref|NP_001081862.1| oocyte-specific histone RNA stem-loop-binding protein 2 [Xenopus
laevis]
gi|9789803|sp|Q9YGP6.1|SLBP2_XENLA RecName: Full=Oocyte-specific histone RNA stem-loop-binding protein
2
gi|4324619|gb|AAD16961.1| oocyte-specific histone mRNA stem-loop binding protein [Xenopus
laevis]
Length = 250
Score = 94.7 bits (234), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 47/78 (60%), Positives = 55/78 (70%), Gaps = 1/78 (1%)
Query: 26 LAYETDPAILLRRQKQIDFGKNTVGYDRYCSMV-KREDRTKDHPKTPPKELKYSRRAWDG 84
+ YETD A L RRQKQID+GKNTVGY Y V K E ++ HP+TP K KYSRR+WD
Sbjct: 99 VGYETDEATLHRRQKQIDYGKNTVGYQCYLQQVPKTERKSGVHPRTPNKSKKYSRRSWDM 158
Query: 85 LIKSWRSRLHFWDPPNEN 102
IK WR LH WDPP++N
Sbjct: 159 QIKLWRRDLHAWDPPSQN 176
>gi|20987196|gb|AAH29631.1| Slbp protein [Mus musculus]
gi|148705479|gb|EDL37426.1| mCG16335, isoform CRA_c [Mus musculus]
Length = 255
Score = 94.7 bits (234), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 45/76 (59%), Positives = 54/76 (71%), Gaps = 1/76 (1%)
Query: 29 ETDPAILLRRQKQIDFGKNTVGYDRYCSMVKREDRTKD-HPKTPPKELKYSRRAWDGLIK 87
ETD ++L+RRQKQI++GKNT+ YDRY V R R HP+TP K KYSRR+WD IK
Sbjct: 109 ETDESVLMRRQKQINYGKNTIAYDRYIKEVPRHLRQPGIHPRTPNKFKKYSRRSWDQQIK 168
Query: 88 SWRSRLHFWDPPNENG 103
W+ LHFWDPP E G
Sbjct: 169 LWKVALHFWDPPAEEG 184
>gi|213626717|gb|AAI69951.1| Oocyte-specific histone mRNA stem-loop binding protein [Xenopus
laevis]
Length = 250
Score = 94.7 bits (234), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 47/78 (60%), Positives = 55/78 (70%), Gaps = 1/78 (1%)
Query: 26 LAYETDPAILLRRQKQIDFGKNTVGYDRYCSMV-KREDRTKDHPKTPPKELKYSRRAWDG 84
+ YETD A L RRQKQID+GKNTVGY Y V K E ++ HP+TP K KYSRR+WD
Sbjct: 99 VGYETDEATLHRRQKQIDYGKNTVGYQCYLQQVPKTERKSGVHPRTPNKSKKYSRRSWDM 158
Query: 85 LIKSWRSRLHFWDPPNEN 102
IK WR LH WDPP++N
Sbjct: 159 QIKLWRRDLHAWDPPSQN 176
>gi|426232383|ref|XP_004010204.1| PREDICTED: histone RNA hairpin-binding protein [Ovis aries]
Length = 218
Score = 94.4 bits (233), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 45/76 (59%), Positives = 54/76 (71%), Gaps = 1/76 (1%)
Query: 29 ETDPAILLRRQKQIDFGKNTVGYDRYCSMVKREDRTKD-HPKTPPKELKYSRRAWDGLIK 87
ETD ++L+RRQKQI++GKNT+ YDRY V R R HPKTP K KYSRR+WD I+
Sbjct: 72 ETDESVLMRRQKQINYGKNTIAYDRYIKEVPRHLRQPGVHPKTPNKFKKYSRRSWDQQIR 131
Query: 88 SWRSRLHFWDPPNENG 103
W+ LHFWDPP E G
Sbjct: 132 LWKVALHFWDPPAEEG 147
>gi|395543158|ref|XP_003773488.1| PREDICTED: histone RNA hairpin-binding protein [Sarcophilus
harrisii]
Length = 295
Score = 94.4 bits (233), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 46/76 (60%), Positives = 53/76 (69%), Gaps = 1/76 (1%)
Query: 29 ETDPAILLRRQKQIDFGKNTVGYDRYCSMVKREDRTKD-HPKTPPKELKYSRRAWDGLIK 87
ETD +L+RRQKQI++GKNT+ YDRY V R R HPKTP K KYSRR+WD IK
Sbjct: 149 ETDENVLMRRQKQINYGKNTIAYDRYIKEVPRHLRQPGIHPKTPNKFKKYSRRSWDQQIK 208
Query: 88 SWRSRLHFWDPPNENG 103
W+ LHFWDPP E G
Sbjct: 209 LWKVALHFWDPPAEEG 224
>gi|354483954|ref|XP_003504157.1| PREDICTED: histone RNA hairpin-binding protein-like [Cricetulus
griseus]
Length = 275
Score = 94.4 bits (233), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 45/76 (59%), Positives = 54/76 (71%), Gaps = 1/76 (1%)
Query: 29 ETDPAILLRRQKQIDFGKNTVGYDRYCSMVKREDRTKD-HPKTPPKELKYSRRAWDGLIK 87
ETD ++L+RRQKQI++GKNT+ YDRY V R R HP+TP K KYSRR+WD IK
Sbjct: 129 ETDESVLMRRQKQINYGKNTIAYDRYIKEVPRHLRQPGIHPRTPNKFKKYSRRSWDQQIK 188
Query: 88 SWRSRLHFWDPPNENG 103
W+ LHFWDPP E G
Sbjct: 189 LWKVALHFWDPPAEEG 204
>gi|296486303|tpg|DAA28416.1| TPA: histone stem loop binding protein [Bos taurus]
Length = 272
Score = 94.4 bits (233), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 45/76 (59%), Positives = 54/76 (71%), Gaps = 1/76 (1%)
Query: 29 ETDPAILLRRQKQIDFGKNTVGYDRYCSMVKREDRTKD-HPKTPPKELKYSRRAWDGLIK 87
ETD ++L+RRQKQI++GKNT+ YDRY V R R HPKTP K KYSRR+WD I+
Sbjct: 129 ETDESVLMRRQKQINYGKNTIAYDRYIKEVPRHLRQPGVHPKTPNKFKKYSRRSWDQQIR 188
Query: 88 SWRSRLHFWDPPNENG 103
W+ LHFWDPP E G
Sbjct: 189 LWKVALHFWDPPAEEG 204
>gi|74187587|dbj|BAE36737.1| unnamed protein product [Mus musculus]
Length = 275
Score = 94.4 bits (233), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 45/76 (59%), Positives = 54/76 (71%), Gaps = 1/76 (1%)
Query: 29 ETDPAILLRRQKQIDFGKNTVGYDRYCSMVKREDRTKD-HPKTPPKELKYSRRAWDGLIK 87
ETD ++L+RRQKQI++GKNT+ YDRY V R R HP+TP K KYSRR+WD IK
Sbjct: 129 ETDESVLMRRQKQINYGKNTIAYDRYIKEVPRHLRQPGIHPRTPNKFKKYSRRSWDQQIK 188
Query: 88 SWRSRLHFWDPPNENG 103
W+ LHFWDPP E G
Sbjct: 189 LWKVALHFWDPPAEEG 204
>gi|6677987|ref|NP_033219.1| histone RNA hairpin-binding protein [Mus musculus]
gi|9789784|sp|P97440.1|SLBP_MOUSE RecName: Full=Histone RNA hairpin-binding protein; AltName:
Full=Histone stem-loop-binding protein
gi|1732079|gb|AAC53530.1| histone stem-loop binding protein [Mus musculus]
gi|74180351|dbj|BAE32343.1| unnamed protein product [Mus musculus]
gi|148705478|gb|EDL37425.1| mCG16335, isoform CRA_b [Mus musculus]
Length = 275
Score = 94.4 bits (233), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 45/76 (59%), Positives = 54/76 (71%), Gaps = 1/76 (1%)
Query: 29 ETDPAILLRRQKQIDFGKNTVGYDRYCSMVKREDRTKD-HPKTPPKELKYSRRAWDGLIK 87
ETD ++L+RRQKQI++GKNT+ YDRY V R R HP+TP K KYSRR+WD IK
Sbjct: 129 ETDESVLMRRQKQINYGKNTIAYDRYIKEVPRHLRQPGIHPRTPNKFKKYSRRSWDQQIK 188
Query: 88 SWRSRLHFWDPPNENG 103
W+ LHFWDPP E G
Sbjct: 189 LWKVALHFWDPPAEEG 204
>gi|417398236|gb|JAA46151.1| Putative histone rna hairpin-binding protein isoform 4 [Desmodus
rotundus]
Length = 276
Score = 94.4 bits (233), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 46/76 (60%), Positives = 54/76 (71%), Gaps = 1/76 (1%)
Query: 29 ETDPAILLRRQKQIDFGKNTVGYDRYCSMVKREDRTKD-HPKTPPKELKYSRRAWDGLIK 87
ETD ++L+RRQKQI++GKNT+ YDRY V R R HPKTP K KYSRR+WD IK
Sbjct: 129 ETDESVLMRRQKQINYGKNTMAYDRYIREVPRHLRQPGIHPKTPNKFKKYSRRSWDQQIK 188
Query: 88 SWRSRLHFWDPPNENG 103
W+ LHFWDPP E G
Sbjct: 189 LWKVALHFWDPPAEEG 204
>gi|114053069|ref|NP_001039345.1| histone RNA hairpin-binding protein [Bos taurus]
gi|82571711|gb|AAI10147.1| Histone stem loop binding protein [Bos taurus]
Length = 271
Score = 94.4 bits (233), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 45/76 (59%), Positives = 54/76 (71%), Gaps = 1/76 (1%)
Query: 29 ETDPAILLRRQKQIDFGKNTVGYDRYCSMVKREDRTKD-HPKTPPKELKYSRRAWDGLIK 87
ETD ++L+RRQKQI++GKNT+ YDRY V R R HPKTP K KYSRR+WD I+
Sbjct: 129 ETDESVLMRRQKQINYGKNTIAYDRYIKEVPRHLRQPGVHPKTPNKFKKYSRRSWDQQIR 188
Query: 88 SWRSRLHFWDPPNENG 103
W+ LHFWDPP E G
Sbjct: 189 LWKVALHFWDPPAEEG 204
>gi|74199944|dbj|BAE20786.1| unnamed protein product [Mus musculus]
Length = 250
Score = 94.4 bits (233), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 45/76 (59%), Positives = 54/76 (71%), Gaps = 1/76 (1%)
Query: 29 ETDPAILLRRQKQIDFGKNTVGYDRYCSMVKREDRTKD-HPKTPPKELKYSRRAWDGLIK 87
ETD ++L+RRQKQI++GKNT+ YDRY V R R HP+TP K KYSRR+WD IK
Sbjct: 129 ETDESVLMRRQKQINYGKNTIAYDRYIKEVPRHLRQPGIHPRTPNKFKKYSRRSWDQQIK 188
Query: 88 SWRSRLHFWDPPNENG 103
W+ LHFWDPP E G
Sbjct: 189 LWKVALHFWDPPAEEG 204
>gi|321475240|gb|EFX86203.1| hypothetical protein DAPPUDRAFT_45102 [Daphnia pulex]
Length = 125
Score = 94.0 bits (232), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 52/106 (49%), Positives = 64/106 (60%), Gaps = 6/106 (5%)
Query: 29 ETDPAILLRRQKQIDFGKNTVGYDRYCSMVKREDRTKDHPKTPPKELKYSRRAWDGLIKS 88
E DP +L RRQKQID+GKNT+ YD Y V + RTK+HP+TP K KYSRR WDG IK
Sbjct: 22 EEDPLVLSRRQKQIDYGKNTIAYDNYLKTVPKNKRTKEHPQTPNKYKKYSRRGWDGSIKV 81
Query: 89 WRSRLHFWDPPNENGEPNSLLLDEDDDISSLDSQSVDSLPCTPIQE 134
WR LH +D +E P E+ D +D ++D LP I E
Sbjct: 82 WRKMLHVFD-TSEASNPKE---KENADEDVVD--AIDYLPFDLIDE 121
>gi|148705477|gb|EDL37424.1| mCG16335, isoform CRA_a [Mus musculus]
Length = 240
Score = 94.0 bits (232), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 45/76 (59%), Positives = 54/76 (71%), Gaps = 1/76 (1%)
Query: 29 ETDPAILLRRQKQIDFGKNTVGYDRYCSMVKREDRTKD-HPKTPPKELKYSRRAWDGLIK 87
ETD ++L+RRQKQI++GKNT+ YDRY V R R HP+TP K KYSRR+WD IK
Sbjct: 94 ETDESVLMRRQKQINYGKNTIAYDRYIKEVPRHLRQPGIHPRTPNKFKKYSRRSWDQQIK 153
Query: 88 SWRSRLHFWDPPNENG 103
W+ LHFWDPP E G
Sbjct: 154 LWKVALHFWDPPAEEG 169
>gi|149047452|gb|EDM00122.1| rCG35799, isoform CRA_b [Rattus norvegicus]
Length = 255
Score = 93.6 bits (231), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 45/76 (59%), Positives = 54/76 (71%), Gaps = 1/76 (1%)
Query: 29 ETDPAILLRRQKQIDFGKNTVGYDRYCSMVKREDRTKD-HPKTPPKELKYSRRAWDGLIK 87
ETD ++L+RRQKQI++GKNT+ YDRY V R R HP+TP K KYSRR+WD IK
Sbjct: 109 ETDESVLMRRQKQINYGKNTMAYDRYIKEVPRHLRQPGIHPRTPNKFKKYSRRSWDQQIK 168
Query: 88 SWRSRLHFWDPPNENG 103
W+ LHFWDPP E G
Sbjct: 169 LWKVALHFWDPPAEEG 184
>gi|195976798|ref|NP_001124460.1| histone RNA hairpin-binding protein [Rattus norvegicus]
gi|149047451|gb|EDM00121.1| rCG35799, isoform CRA_a [Rattus norvegicus]
gi|189442753|gb|AAI67755.1| Slbp protein [Rattus norvegicus]
Length = 275
Score = 93.6 bits (231), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 45/76 (59%), Positives = 54/76 (71%), Gaps = 1/76 (1%)
Query: 29 ETDPAILLRRQKQIDFGKNTVGYDRYCSMVKREDRTKD-HPKTPPKELKYSRRAWDGLIK 87
ETD ++L+RRQKQI++GKNT+ YDRY V R R HP+TP K KYSRR+WD IK
Sbjct: 129 ETDESVLMRRQKQINYGKNTMAYDRYIKEVPRHLRQPGIHPRTPNKFKKYSRRSWDQQIK 188
Query: 88 SWRSRLHFWDPPNENG 103
W+ LHFWDPP E G
Sbjct: 189 LWKVALHFWDPPAEEG 204
>gi|149047453|gb|EDM00123.1| rCG35799, isoform CRA_c [Rattus norvegicus]
Length = 240
Score = 93.2 bits (230), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 45/76 (59%), Positives = 54/76 (71%), Gaps = 1/76 (1%)
Query: 29 ETDPAILLRRQKQIDFGKNTVGYDRYCSMVKREDRTKD-HPKTPPKELKYSRRAWDGLIK 87
ETD ++L+RRQKQI++GKNT+ YDRY V R R HP+TP K KYSRR+WD IK
Sbjct: 94 ETDESVLMRRQKQINYGKNTMAYDRYIKEVPRHLRQPGIHPRTPNKFKKYSRRSWDQQIK 153
Query: 88 SWRSRLHFWDPPNENG 103
W+ LHFWDPP E G
Sbjct: 154 LWKVALHFWDPPAEEG 169
>gi|298706915|emb|CBJ29742.1| Histone hairpin binding protein [Ectocarpus siliculosus]
Length = 1270
Score = 92.4 bits (228), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 49/117 (41%), Positives = 67/117 (57%), Gaps = 10/117 (8%)
Query: 21 GSGKKLAY----ETDPAILLRRQKQIDFGKNTVGYDRYCSMVKREDRTKDHPKTPPKELK 76
G G+ L + E DP + +RQKQIDFGKNT GYDRY + V R R++ PKTP KE K
Sbjct: 906 GQGEALKFASDREEDPHRIAQRQKQIDFGKNTSGYDRYLAAVPRNKRSRGDPKTPNKEKK 965
Query: 77 YSRRAWDGLIKSWRSRLHFWD------PPNENGEPNSLLLDEDDDISSLDSQSVDSL 127
S+R WDG I+SWR +LH +D E+G + + D + D + Q ++
Sbjct: 966 MSKRRWDGQIRSWRRQLHEYDVEVAGAASGEDGSHDQAVTDSEGDGETAREQGFSAV 1022
>gi|301614839|ref|XP_002936880.1| PREDICTED: oocyte-specific histone RNA stem-loop-binding protein
2-like [Xenopus (Silurana) tropicalis]
Length = 233
Score = 92.4 bits (228), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 46/77 (59%), Positives = 53/77 (68%), Gaps = 1/77 (1%)
Query: 28 YETDPAILLRRQKQIDFGKNTVGYDRYCSMV-KREDRTKDHPKTPPKELKYSRRAWDGLI 86
YETD A L RRQKQID+GKNT+GY Y V K E + HP+TP K KYSRR+WD I
Sbjct: 84 YETDEATLQRRQKQIDYGKNTIGYQCYLQQVPKSERKPGVHPRTPNKYKKYSRRSWDMQI 143
Query: 87 KSWRSRLHFWDPPNENG 103
K WR LH WDPP++N
Sbjct: 144 KLWRRALHAWDPPSQNS 160
>gi|449501376|ref|XP_004176682.1| PREDICTED: LOW QUALITY PROTEIN: histone RNA hairpin-binding protein
[Taeniopygia guttata]
Length = 272
Score = 92.0 bits (227), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 44/79 (55%), Positives = 53/79 (67%), Gaps = 1/79 (1%)
Query: 26 LAYETDPAILLRRQKQIDFGKNTVGYDRYCSMVKREDRTKD-HPKTPPKELKYSRRAWDG 84
+ ETD +L+RRQKQI++GKNT+ YDRY V R R HP+TP K KYSRR+WD
Sbjct: 122 VELETDEVVLMRRQKQINYGKNTIAYDRYIKEVPRCHRIPGVHPRTPNKFKKYSRRSWDQ 181
Query: 85 LIKSWRSRLHFWDPPNENG 103
IK W+ LH WDPP E G
Sbjct: 182 QIKLWKVALHSWDPPTEGG 200
>gi|33416889|gb|AAH55585.1| Sb:cb157 protein [Danio rerio]
Length = 290
Score = 92.0 bits (227), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 45/76 (59%), Positives = 52/76 (68%), Gaps = 1/76 (1%)
Query: 29 ETDPAILLRRQKQIDFGKNTVGYDRYCSMVKREDRTKD-HPKTPPKELKYSRRAWDGLIK 87
ETD L+RRQKQI++GKNT+ YDRY V + R HPKTP K KYSRR+WD IK
Sbjct: 153 ETDETTLIRRQKQINYGKNTLAYDRYIKEVPKHLRQPGVHPKTPNKFKKYSRRSWDQQIK 212
Query: 88 SWRSRLHFWDPPNENG 103
WR +LH WDPP E G
Sbjct: 213 LWRVKLHAWDPPAEEG 228
>gi|371875514|ref|NP_001243122.1| stem-loop binding protein isoform 1 [Danio rerio]
Length = 271
Score = 92.0 bits (227), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 45/76 (59%), Positives = 52/76 (68%), Gaps = 1/76 (1%)
Query: 29 ETDPAILLRRQKQIDFGKNTVGYDRYCSMVKREDRTKD-HPKTPPKELKYSRRAWDGLIK 87
ETD L+RRQKQI++GKNT+ YDRY V + R HPKTP K KYSRR+WD IK
Sbjct: 134 ETDETTLIRRQKQINYGKNTLAYDRYIKEVPKHLRQPGVHPKTPNKFKKYSRRSWDQQIK 193
Query: 88 SWRSRLHFWDPPNENG 103
WR +LH WDPP E G
Sbjct: 194 LWRVKLHAWDPPAEEG 209
>gi|326919573|ref|XP_003206054.1| PREDICTED: histone RNA hairpin-binding protein-like [Meleagris
gallopavo]
Length = 322
Score = 92.0 bits (227), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 48/102 (47%), Positives = 63/102 (61%), Gaps = 3/102 (2%)
Query: 26 LAYETDPAILLRRQKQIDFGKNTVGYDRYCSMVKREDRTKD-HPKTPPKELKYSRRAWDG 84
+ ETD +L+RRQKQI++GKNT+ YDRY V R R HP+TP K KYSRR+WD
Sbjct: 172 VELETDEVVLMRRQKQINYGKNTIAYDRYIKEVPRCHRIPGVHPRTPNKFKKYSRRSWDQ 231
Query: 85 LIKSWRSRLHFWDPPNENGEPNSLLLDEDDDISSLDSQSVDS 126
IK W+ LH WDPP E G L D+ ++++S+ S
Sbjct: 232 QIKLWKVALHSWDPPTEEG--CDLQEISPVDLGEMETESIGS 271
>gi|335308157|ref|XP_003361122.1| PREDICTED: hypothetical protein LOC100625723 [Sus scrofa]
Length = 442
Score = 92.0 bits (227), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 44/76 (57%), Positives = 53/76 (69%), Gaps = 1/76 (1%)
Query: 29 ETDPAILLRRQKQIDFGKNTVGYDRYCSMVKREDRTKD-HPKTPPKELKYSRRAWDGLIK 87
ETD ++L+RRQKQI++GKNT+ YDRY V R R HP+TP K KYSRR+WD IK
Sbjct: 295 ETDESVLMRRQKQINYGKNTIAYDRYIKEVPRHLRQPGVHPRTPNKFKKYSRRSWDQQIK 354
Query: 88 SWRSRLHFWDPPNENG 103
W+ LHFWDPP G
Sbjct: 355 LWKVALHFWDPPAAEG 370
>gi|52138703|ref|NP_001004403.1| histone RNA hairpin-binding protein [Gallus gallus]
gi|50593176|gb|AAT79382.1| histone stem-loop bindng protein [Gallus gallus]
gi|53128451|emb|CAG31303.1| hypothetical protein RCJMB04_4o10 [Gallus gallus]
Length = 274
Score = 92.0 bits (227), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 44/79 (55%), Positives = 53/79 (67%), Gaps = 1/79 (1%)
Query: 26 LAYETDPAILLRRQKQIDFGKNTVGYDRYCSMVKREDRTKD-HPKTPPKELKYSRRAWDG 84
+ ETD +L+RRQKQI++GKNT+ YDRY V R R HP+TP K KYSRR+WD
Sbjct: 124 VELETDEVVLMRRQKQINYGKNTIAYDRYIKEVPRCHRIPGVHPRTPNKFKKYSRRSWDQ 183
Query: 85 LIKSWRSRLHFWDPPNENG 103
IK W+ LH WDPP E G
Sbjct: 184 QIKLWKVALHSWDPPTEEG 202
>gi|349501090|ref|NP_001231786.1| stem-loop binding protein [Sus scrofa]
Length = 275
Score = 92.0 bits (227), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 44/76 (57%), Positives = 53/76 (69%), Gaps = 1/76 (1%)
Query: 29 ETDPAILLRRQKQIDFGKNTVGYDRYCSMVKREDRTKD-HPKTPPKELKYSRRAWDGLIK 87
ETD ++L+RRQKQI++GKNT+ YDRY V R R HP+TP K KYSRR+WD IK
Sbjct: 129 ETDESVLMRRQKQINYGKNTIAYDRYIKEVPRHLRQPGVHPRTPNKFKKYSRRSWDQQIK 188
Query: 88 SWRSRLHFWDPPNENG 103
W+ LHFWDPP G
Sbjct: 189 LWKVALHFWDPPAAEG 204
>gi|371875547|ref|NP_001243123.1| stem-loop binding protein isoform 2 [Danio rerio]
Length = 236
Score = 92.0 bits (227), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 45/76 (59%), Positives = 52/76 (68%), Gaps = 1/76 (1%)
Query: 29 ETDPAILLRRQKQIDFGKNTVGYDRYCSMVKREDRTKD-HPKTPPKELKYSRRAWDGLIK 87
ETD L+RRQKQI++GKNT+ YDRY V + R HPKTP K KYSRR+WD IK
Sbjct: 99 ETDETTLIRRQKQINYGKNTLAYDRYIKEVPKHLRQPGVHPKTPNKFKKYSRRSWDQQIK 158
Query: 88 SWRSRLHFWDPPNENG 103
WR +LH WDPP E G
Sbjct: 159 LWRVKLHAWDPPAEEG 174
>gi|307106254|gb|EFN54500.1| hypothetical protein CHLNCDRAFT_52961 [Chlorella variabilis]
Length = 869
Score = 91.7 bits (226), Expect = 9e-17, Method: Composition-based stats.
Identities = 50/113 (44%), Positives = 63/113 (55%), Gaps = 6/113 (5%)
Query: 10 NANKKSGPGTPGSGKKLAYETDPAILLRRQKQIDFGKNTVGYDRYCSMVKREDRTKD-HP 68
+A GP ++ ETDP L +RQKQ+D GKNT+GY RY V RE R K P
Sbjct: 584 DATPSGGPRQLSGAQR---ETDPHRLAQRQKQLDLGKNTLGYQRYRQAVPRERRNKKTDP 640
Query: 69 KTPPKELKYSRRAWDGLIKSWRSRLHFWDPPNENGEPNSLLLDEDDDISSLDS 121
TP S+RA++G +K WR +LH WDPP + GEP LL D+ L S
Sbjct: 641 MTPDVYQMCSKRAFEGQVKKWRRQLHAWDPPEDGGEP--ALLPVHSDVGGLAS 691
>gi|351713708|gb|EHB16627.1| Histone RNA hairpin-binding protein [Heterocephalus glaber]
Length = 173
Score = 91.3 bits (225), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 45/76 (59%), Positives = 52/76 (68%), Gaps = 1/76 (1%)
Query: 29 ETDPAILLRRQKQIDFGKNTVGYDRYCSMVKREDRTKD-HPKTPPKELKYSRRAWDGLIK 87
ETD ++L+RRQKQI+ GKNT+ YD Y V R R HPKTP K KYSRR+WD IK
Sbjct: 27 ETDESVLMRRQKQINCGKNTIAYDCYIKEVPRHLRQPGIHPKTPNKFKKYSRRSWDQQIK 86
Query: 88 SWRSRLHFWDPPNENG 103
W+ LHFWDPP E G
Sbjct: 87 LWKVALHFWDPPAEEG 102
>gi|351709471|gb|EHB12390.1| Histone RNA hairpin-binding protein [Heterocephalus glaber]
Length = 174
Score = 91.3 bits (225), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 45/76 (59%), Positives = 53/76 (69%), Gaps = 1/76 (1%)
Query: 29 ETDPAILLRRQKQIDFGKNTVGYDRYCSMVKREDRTKD-HPKTPPKELKYSRRAWDGLIK 87
ETD ++L+RRQKQI++GKNT+ YDRY V R R HPKTP K KYSRR+WD IK
Sbjct: 28 ETDESVLMRRQKQINYGKNTIAYDRYIKEVPRHLRQPGIHPKTPNKFKKYSRRSWDQRIK 87
Query: 88 SWRSRLHFWDPPNENG 103
+ LHFWDPP E G
Sbjct: 88 LRKVALHFWDPPAEEG 103
>gi|74193866|dbj|BAE22851.1| unnamed protein product [Mus musculus]
Length = 195
Score = 90.9 bits (224), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 43/74 (58%), Positives = 52/74 (70%), Gaps = 1/74 (1%)
Query: 31 DPAILLRRQKQIDFGKNTVGYDRYCSMVKREDRTKD-HPKTPPKELKYSRRAWDGLIKSW 89
D ++L+RRQKQI++GKNT+ YDRY V R R HP+TP K KYSRR+WD IK W
Sbjct: 1 DESVLMRRQKQINYGKNTIAYDRYIKEVPRHLRQPGIHPRTPNKFKKYSRRSWDQQIKLW 60
Query: 90 RSRLHFWDPPNENG 103
+ LHFWDPP E G
Sbjct: 61 KVALHFWDPPAEEG 74
>gi|241705170|ref|XP_002413235.1| conserved hypothetical protein [Ixodes scapularis]
gi|215507049|gb|EEC16543.1| conserved hypothetical protein [Ixodes scapularis]
Length = 143
Score = 90.1 bits (222), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 37/71 (52%), Positives = 53/71 (74%)
Query: 29 ETDPAILLRRQKQIDFGKNTVGYDRYCSMVKREDRTKDHPKTPPKELKYSRRAWDGLIKS 88
ETDP +L RR KQ+++GK+T GY RYC V ++ R + HP+TP + ++YSRR+WD ++
Sbjct: 56 ETDPEVLARRLKQLEYGKSTEGYKRYCDAVPKDKREQLHPRTPDRFVQYSRRSWDAQVRI 115
Query: 89 WRSRLHFWDPP 99
WR +LH WDPP
Sbjct: 116 WRRQLHLWDPP 126
>gi|168052721|ref|XP_001778788.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162669794|gb|EDQ56374.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 669
Score = 90.1 bits (222), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 45/89 (50%), Positives = 55/89 (61%)
Query: 19 TPGSGKKLAYETDPAILLRRQKQIDFGKNTVGYDRYCSMVKREDRTKDHPKTPPKELKYS 78
P S E DP L +RQKQID+GKNT+GY+RY MV R RTK HP+TP S
Sbjct: 468 APISAPTKQVEMDPHRLCQRQKQIDYGKNTLGYERYIEMVPRYKRTKSHPRTPDIRQVCS 527
Query: 79 RRAWDGLIKSWRSRLHFWDPPNENGEPNS 107
+R+WDG I+ WR LH +DPP E +S
Sbjct: 528 KRSWDGQIRKWRRLLHEYDPPKGEDEEDS 556
>gi|260830677|ref|XP_002610287.1| hypothetical protein BRAFLDRAFT_126848 [Branchiostoma floridae]
gi|229295651|gb|EEN66297.1| hypothetical protein BRAFLDRAFT_126848 [Branchiostoma floridae]
Length = 284
Score = 90.1 bits (222), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 53/127 (41%), Positives = 63/127 (49%), Gaps = 7/127 (5%)
Query: 6 RHNTNANKKSGPGTPGSGKKLAYETDPAILLRRQKQIDFGKNTVGYDRYCSMVKREDRTK 65
RH T + S ETD L+RRQKQID+GKNT+ YD Y R R K
Sbjct: 151 RHRTCSTGSSEQEDNSKANPAMCETDQVTLMRRQKQIDYGKNTLAYDNYSQNTPRHARKK 210
Query: 66 DHPKTPPKELKYSRRAWDGLIKSWRSRLHFWDPPNENGEPNS-------LLLDEDDDISS 118
D P TP K SRRAWDG IK WR +LH WDP E ++ LD+ D+
Sbjct: 211 DDPWTPTKFAVCSRRAWDGRIKEWRKKLHNWDPQIEQVSASAEGIVEEEACLDDVPDLEL 270
Query: 119 LDSQSVD 125
LD +D
Sbjct: 271 LDPMDID 277
>gi|443695821|gb|ELT96648.1| hypothetical protein CAPTEDRAFT_219525 [Capitella teleta]
Length = 334
Score = 88.6 bits (218), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 43/93 (46%), Positives = 61/93 (65%), Gaps = 2/93 (2%)
Query: 29 ETDPAILLRRQKQIDFGKNTVGYDRYCSMVKREDRTKDHPKTPPKELKYSRRAWDGLIKS 88
E DP +L RR KQID+GK+T Y +Y + V + RT+DHP TP K +YSRR+WD I+
Sbjct: 156 ERDPVVLQRRAKQIDYGKSTPEYAKYLAEVPKHVRTEDHPSTPNKNRQYSRRSWDTQIRI 215
Query: 89 WRSRLHFWDPPNENGEPNSLLLDEDDDISSLDS 121
WR LH WDP P+S+ +++D++S+ S
Sbjct: 216 WRKTLHIWDPVTST--PDSVREEDEDEVSTTGS 246
>gi|326919569|ref|XP_003206052.1| PREDICTED: hypothetical protein LOC100546401 [Meleagris gallopavo]
Length = 182
Score = 88.6 bits (218), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 51/120 (42%), Positives = 65/120 (54%), Gaps = 21/120 (17%)
Query: 29 ETDPAILLRRQKQIDFGKNTVGYDRYCSMVKREDRTKD-HPKTPPKELKYSRRAWDGLIK 87
ETD +L RRQKQI+FGKNT+ YDRY V + R HP+TP K KYSRR+WD I+
Sbjct: 23 ETDEVVLRRRQKQINFGKNTLAYDRYIKEVPKNQRIPGVHPRTPNKFKKYSRRSWDQQIR 82
Query: 88 SWRSRLHFWDPPNENGEPNSLLLDEDDDISSLDSQSVDSLPCTPIQE--WKRRVRAKRES 145
W+ LH WDPP E ++ + +PC+P WKRR R +S
Sbjct: 83 LWKIALHAWDPPTE------------------ETWDLQPVPCSPDSSPVWKRRKRNNSDS 124
>gi|168066170|ref|XP_001785015.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162663400|gb|EDQ50165.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 590
Score = 88.2 bits (217), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 46/93 (49%), Positives = 60/93 (64%), Gaps = 4/93 (4%)
Query: 29 ETDPAILLRRQKQIDFGKNTVGYDRYCSMVKREDRTKDHPKTPPKELKYSRRAWDGLIKS 88
E DP L +RQKQID+GKNT+GY+RY +V R RTK HP+TP S+R+WDG I+
Sbjct: 466 ELDPHRLCQRQKQIDYGKNTLGYERYIELVPRYQRTKAHPRTPDIRQVCSKRSWDGQIRK 525
Query: 89 WRSRLHFWDPPNENGE--PNSLLL--DEDDDIS 117
WR LH +DPP E P+ + + E D+IS
Sbjct: 526 WRRLLHEYDPPKGEDEEDPDQVFVPTREHDNIS 558
>gi|40549389|gb|AAR87749.1| stem-loop binding protein [Lytechinus variegatus]
Length = 496
Score = 87.4 bits (215), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 43/72 (59%), Positives = 50/72 (69%), Gaps = 1/72 (1%)
Query: 29 ETDPAILLRRQKQIDFGKNTVGYDRYCSMVKREDRTK-DHPKTPPKELKYSRRAWDGLIK 87
ETD +L+RRQKQIDFGKNT YD Y + VKR +R K HP TP K SRR+WD IK
Sbjct: 259 ETDRDVLIRRQKQIDFGKNTAAYDNYITTVKRRNRMKGKHPITPNKFQLTSRRSWDKQIK 318
Query: 88 SWRSRLHFWDPP 99
WR +LH +DPP
Sbjct: 319 LWRIKLHEFDPP 330
>gi|348671160|gb|EGZ10981.1| hypothetical protein PHYSODRAFT_519141 [Phytophthora sojae]
Length = 208
Score = 87.4 bits (215), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 38/72 (52%), Positives = 51/72 (70%), Gaps = 1/72 (1%)
Query: 29 ETDPAILLRRQKQIDFGKNTVGYDRYCSMVKR-EDRTKDHPKTPPKELKYSRRAWDGLIK 87
ETDP L +RQKQID+GKNT+GYDRYC+ V R + R HP TP K + ++ +DG+++
Sbjct: 52 ETDPHRLAQRQKQIDYGKNTIGYDRYCAQVPRLQRRPGKHPMTPDKTKRMGKKVFDGIVR 111
Query: 88 SWRSRLHFWDPP 99
WR LH +DPP
Sbjct: 112 KWRQALHKYDPP 123
>gi|198437752|ref|XP_002126575.1| PREDICTED: similar to stem-loop (histone) binding protein [Ciona
intestinalis]
Length = 295
Score = 87.0 bits (214), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 39/85 (45%), Positives = 56/85 (65%)
Query: 18 GTPGSGKKLAYETDPAILLRRQKQIDFGKNTVGYDRYCSMVKREDRTKDHPKTPPKELKY 77
GT +++A E D +L+RR+KQI++GKNT+ YD Y +++ RTK HP+TP K K
Sbjct: 144 GTIPLLEEVAVEEDSVVLMRREKQIEYGKNTIAYDNYTREIQKHKRTKFHPRTPDKFAKC 203
Query: 78 SRRAWDGLIKSWRSRLHFWDPPNEN 102
SRR+WD +K WR LH W+ E+
Sbjct: 204 SRRSWDAQVKIWRKALHNWEEYTED 228
>gi|449273556|gb|EMC83040.1| Histone RNA hairpin-binding protein, partial [Columba livia]
Length = 199
Score = 86.3 bits (212), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 44/91 (48%), Positives = 56/91 (61%), Gaps = 1/91 (1%)
Query: 29 ETDPAILLRRQKQIDFGKNTVGYDRYCSMVKREDRTKD-HPKTPPKELKYSRRAWDGLIK 87
ETD +L RRQKQI+FGKNT+ YDRY V + R HP+TP K KYSRR+WD I+
Sbjct: 16 ETDEVVLRRRQKQINFGKNTLAYDRYIKEVPKNQRIPGVHPRTPNKFKKYSRRSWDQQIR 75
Query: 88 SWRSRLHFWDPPNENGEPNSLLLDEDDDISS 118
W+ LH WDPP E + + + + SS
Sbjct: 76 LWKIALHAWDPPEETWDLQPVCVSTEPSYSS 106
>gi|281204532|gb|EFA78727.1| histone RNA hairpin-binding protein [Polysphondylium pallidum
PN500]
Length = 233
Score = 86.3 bits (212), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 44/90 (48%), Positives = 55/90 (61%), Gaps = 7/90 (7%)
Query: 29 ETDPAILLRRQKQIDFGKNTVGYDRYCSMVKREDRTKDHPKTPPKELKYSRRAWDGLIKS 88
E+DP L RQK IDFGKNT+GYD Y + + R R K HP+TP K + SRR+W G IK
Sbjct: 88 ESDPVKLKTRQKDIDFGKNTIGYDNYIAQIPRHKREKQHPRTPDKYQRCSRRSWAGQIKK 147
Query: 89 WRSRLHFWDPPNENGEPNSLLLDEDDDISS 118
WR LH +D PN+ D+DD+ S
Sbjct: 148 WRKELHKFD-------PNATEEDDDDNYIS 170
>gi|410914918|ref|XP_003970934.1| PREDICTED: uncharacterized protein LOC101064256 [Takifugu rubripes]
Length = 342
Score = 85.9 bits (211), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 46/95 (48%), Positives = 55/95 (57%), Gaps = 5/95 (5%)
Query: 29 ETDPAILLRRQKQIDFGKNTVGYDRYCSMVKREDR-TKDHPKTPPKELKYSRRAWDGLIK 87
ET+ A++ RRQKQI +GKNT GY Y V R R K HP TP K KYSRR+WD ++
Sbjct: 141 ETNAAVIKRRQKQIQYGKNTSGYQNYLLQVPRHLRDPKLHPSTPNKYRKYSRRSWDMQVR 200
Query: 88 SWRSRLHFWDPPNENGEPNSLLLDEDDDISSLDSQ 122
WR LH WDPP + E D D + L SQ
Sbjct: 201 LWRRALHMWDPPTDQSE----AADTQDPVEQLQSQ 231
>gi|301107372|ref|XP_002902768.1| conserved hypothetical protein [Phytophthora infestans T30-4]
gi|262097886|gb|EEY55938.1| conserved hypothetical protein [Phytophthora infestans T30-4]
Length = 182
Score = 84.7 bits (208), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 37/72 (51%), Positives = 49/72 (68%), Gaps = 1/72 (1%)
Query: 29 ETDPAILLRRQKQIDFGKNTVGYDRYCSMVKREDRT-KDHPKTPPKELKYSRRAWDGLIK 87
ETDP L +RQKQID+GKNT+GYD YC+ V R R HP TP K + ++ +DG+++
Sbjct: 36 ETDPHRLAQRQKQIDYGKNTIGYDHYCAQVPRHQRRPGKHPMTPDKTRRIGKKVFDGMVR 95
Query: 88 SWRSRLHFWDPP 99
WR LH +DPP
Sbjct: 96 RWRQMLHKYDPP 107
>gi|209737000|gb|ACI69369.1| Histone RNA hairpin-binding protein [Salmo salar]
Length = 273
Score = 84.7 bits (208), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 48/106 (45%), Positives = 62/106 (58%), Gaps = 9/106 (8%)
Query: 27 AYETDPAILLRRQKQIDFGKNTVGYDRYCSMVKREDRTKD-HPKTPPKELKYSRRAWDGL 85
E D +L+RRQKQI +GKNT+ YDRY V + R HPKTP K KYSRR+WD
Sbjct: 131 VMEEDEEVLMRRQKQITYGKNTLAYDRYIKEVPKHLRQPGVHPKTPNKFKKYSRRSWDQQ 190
Query: 86 IKSWRSRLHFWDPPN-ENGEPNSL-------LLDEDDDISSLDSQS 123
IK W+ ++H WDPP E E ++ ++D + D LDS S
Sbjct: 191 IKLWKVKIHAWDPPALEGSELQAIEEVDLDDVMDIELDFPELDSDS 236
>gi|323456728|gb|EGB12594.1| hypothetical protein AURANDRAFT_17941, partial [Aureococcus
anophagefferens]
Length = 74
Score = 84.7 bits (208), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 38/71 (53%), Positives = 53/71 (74%)
Query: 29 ETDPAILLRRQKQIDFGKNTVGYDRYCSMVKREDRTKDHPKTPPKELKYSRRAWDGLIKS 88
ETD L +R+K+I +GKNT+GYDRY +V +E R++ P+TP KYS+R +DG++K+
Sbjct: 1 ETDARRLSQRRKEITYGKNTLGYDRYTRLVPKEKRSRQDPRTPDVTGKYSKRQFDGIVKA 60
Query: 89 WRSRLHFWDPP 99
WR RLH WDPP
Sbjct: 61 WRRRLHEWDPP 71
>gi|148688628|gb|EDL20575.1| mCG11428 [Mus musculus]
Length = 254
Score = 84.7 bits (208), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 41/74 (55%), Positives = 52/74 (70%), Gaps = 1/74 (1%)
Query: 29 ETDPAILLRRQKQIDFGKNTVGYDRYCSMVKREDRTKD-HPKTPPKELKYSRRAWDGLIK 87
ETD ++L+R+QKQI++GKNT+ YDRY V R R HP++P K KYSRR+WD IK
Sbjct: 129 ETDESVLMRKQKQINYGKNTIAYDRYIKEVPRHLRQPGIHPRSPNKFKKYSRRSWDQQIK 188
Query: 88 SWRSRLHFWDPPNE 101
W+ LHF DPP E
Sbjct: 189 LWKVALHFGDPPAE 202
>gi|47551297|ref|NP_999831.1| stem-loop binding protein [Strongylocentrotus purpuratus]
gi|40549387|gb|AAR87748.1| stem-loop binding protein [Strongylocentrotus purpuratus]
Length = 525
Score = 84.0 bits (206), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 43/77 (55%), Positives = 50/77 (64%), Gaps = 1/77 (1%)
Query: 24 KKLAYETDPAILLRRQKQIDFGKNTVGYDRYCSMVKREDRTK-DHPKTPPKELKYSRRAW 82
K+ A E D +L+RRQKQIDFGKNT YD Y VKR +R K HP TP K SRR+W
Sbjct: 240 KETAMEEDRDVLIRRQKQIDFGKNTAAYDNYLHKVKRRNRLKGKHPYTPNKFQVTSRRSW 299
Query: 83 DGLIKSWRSRLHFWDPP 99
D I+ WR +LH DPP
Sbjct: 300 DKQIRLWRIKLHEHDPP 316
>gi|327265591|ref|XP_003217591.1| PREDICTED: oocyte-specific histone RNA stem-loop-binding protein
2-like [Anolis carolinensis]
Length = 145
Score = 83.6 bits (205), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 46/91 (50%), Positives = 54/91 (59%), Gaps = 9/91 (9%)
Query: 29 ETDPAILLRRQKQIDFGKNTVGYDRYCSMVKREDR-TKDHPKTPPKELKYSRRAWDGLIK 87
ETD ++L RRQKQID+GKNT+GY + V + R + HP TP K KYSRR+WD IK
Sbjct: 54 ETDESVLRRRQKQIDYGKNTIGYQCFVQEVPKATRESGVHPCTPNKYKKYSRRSWDMQIK 113
Query: 88 SWRSRLHFWDPP--------NENGEPNSLLL 110
WR LH WDPP E GEP L
Sbjct: 114 LWRRALHGWDPPGLEREAGAGEEGEPPISFL 144
>gi|311250213|ref|XP_003124002.1| PREDICTED: oocyte-specific histone RNA stem-loop-binding protein
2-like [Sus scrofa]
Length = 161
Score = 83.2 bits (204), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 40/74 (54%), Positives = 48/74 (64%), Gaps = 1/74 (1%)
Query: 29 ETDPAILLRRQKQIDFGKNTVGYDRYCSMVKREDRTKD-HPKTPPKELKYSRRAWDGLIK 87
ETD IL RRQKQID+GK T GY + V + R HP+TP K +YSRR+WD I+
Sbjct: 18 ETDKTILQRRQKQIDYGKRTPGYQSFLQQVPKAQRLPGLHPQTPNKNRRYSRRSWDAQIR 77
Query: 88 SWRSRLHFWDPPNE 101
WR LH WDPPN+
Sbjct: 78 QWRRALHSWDPPNQ 91
>gi|387165366|gb|AFJ59922.1| stem loop binding protein 2 [Sus scrofa]
Length = 194
Score = 82.8 bits (203), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 40/74 (54%), Positives = 48/74 (64%), Gaps = 1/74 (1%)
Query: 29 ETDPAILLRRQKQIDFGKNTVGYDRYCSMVKREDRTKD-HPKTPPKELKYSRRAWDGLIK 87
ETD IL RRQKQID+GK T GY + V + R HP+TP K +YSRR+WD I+
Sbjct: 51 ETDKTILQRRQKQIDYGKRTPGYQSFLQQVPKAQRLPGLHPQTPNKNRRYSRRSWDAQIR 110
Query: 88 SWRSRLHFWDPPNE 101
WR LH WDPPN+
Sbjct: 111 QWRRALHSWDPPNQ 124
>gi|328866009|gb|EGG14395.1| histone RNA hairpin-binding protein [Dictyostelium fasciculatum]
Length = 301
Score = 82.4 bits (202), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 39/75 (52%), Positives = 46/75 (61%)
Query: 29 ETDPAILLRRQKQIDFGKNTVGYDRYCSMVKREDRTKDHPKTPPKELKYSRRAWDGLIKS 88
ETDP L RQK ID+GKNT+GYD Y + V ++ R K HP TP K SRR+W IK
Sbjct: 154 ETDPLKLQSRQKDIDYGKNTIGYDNYINTVPKDQRKKGHPMTPSKYQSCSRRSWAAQIKI 213
Query: 89 WRSRLHFWDPPNENG 103
WR LH +DP G
Sbjct: 214 WRKALHQYDPEGHTG 228
>gi|66806263|ref|XP_636854.1| histone RNA hairpin-binding protein [Dictyostelium discoideum AX4]
gi|60465249|gb|EAL63343.1| histone RNA hairpin-binding protein [Dictyostelium discoideum AX4]
Length = 361
Score = 82.4 bits (202), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 39/70 (55%), Positives = 48/70 (68%)
Query: 29 ETDPAILLRRQKQIDFGKNTVGYDRYCSMVKREDRTKDHPKTPPKELKYSRRAWDGLIKS 88
ETD + +RQKQIDFGKNT+GYD Y V ++ R + HP+TP K K SRR+W G IK
Sbjct: 200 ETDEEKIKQRQKQIDFGKNTIGYDNYIQRVPKDKRDRIHPRTPDKYQKCSRRSWLGQIKI 259
Query: 89 WRSRLHFWDP 98
WR LH +DP
Sbjct: 260 WRKALHKFDP 269
>gi|358413124|ref|XP_003582469.1| PREDICTED: oocyte-specific histone RNA stem-loop-binding protein
2-like [Bos taurus]
gi|359067530|ref|XP_003586348.1| PREDICTED: oocyte-specific histone RNA stem-loop-binding protein
2-like [Bos taurus]
gi|224037293|gb|ACN37861.1| stem loop binding protein 2 [Bos taurus]
gi|387165436|gb|AFJ59942.1| stem loop binding protein 2 short isoform [Bos taurus]
gi|387165438|gb|AFJ59943.1| stem loop binding protein 2 long isoform [Bos taurus]
Length = 147
Score = 82.0 bits (201), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 50/139 (35%), Positives = 73/139 (52%), Gaps = 16/139 (11%)
Query: 16 GPGTPGSGKKLAYETDPAILLRRQKQIDFGKNTVGYDRYCSMVKREDRTKD-HPKTPPKE 74
G T + ETD +L RRQKQID+GK T GY + V + R HP+TP K
Sbjct: 24 GVSTEPCHARWELETDATVLQRRQKQIDYGKRTPGYQCFLQQVPKAQRQPGLHPQTPNKN 83
Query: 75 LKYSRRAWDGLIKSWRSRLHFWDPPNENGEPNSLLLDEDDDISSLDSQSVDSLPCTPIQE 134
+YSRR+WD I+ WR LH WDPP++ + + D+ + +DS TP+ +
Sbjct: 84 RRYSRRSWDAQIRKWRRALHSWDPPSQPLQAEGCGM--DNPLGPMDS--------TPLDD 133
Query: 135 WKRRVRAKRESLSEDEEED 153
W + + SE+++ED
Sbjct: 134 WLQALEP-----SENQDED 147
>gi|390367324|ref|XP_003731228.1| PREDICTED: uncharacterized protein LOC592731 [Strongylocentrotus
purpuratus]
Length = 435
Score = 81.6 bits (200), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 43/79 (54%), Positives = 50/79 (63%), Gaps = 1/79 (1%)
Query: 22 SGKKLAYETDPAILLRRQKQIDFGKNTVGYDRYCSMVKREDRTK-DHPKTPPKELKYSRR 80
S K+ E D +L+RRQKQIDFGKNT YD Y VKR +R K HP TP K SRR
Sbjct: 148 SKKETPMEEDRDVLIRRQKQIDFGKNTAAYDNYLHKVKRRNRLKGKHPYTPNKFQVTSRR 207
Query: 81 AWDGLIKSWRSRLHFWDPP 99
+WD I+ WR +LH DPP
Sbjct: 208 SWDKQIRLWRIKLHEHDPP 226
>gi|432895641|ref|XP_004076089.1| PREDICTED: uncharacterized protein LOC101168727 [Oryzias latipes]
Length = 341
Score = 81.3 bits (199), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 40/75 (53%), Positives = 49/75 (65%), Gaps = 1/75 (1%)
Query: 29 ETDPAILLRRQKQIDFGKNTVGYDRYCSMVKREDR-TKDHPKTPPKELKYSRRAWDGLIK 87
ET+ A+L RRQKQI +GKNT GY Y V + R K HP TP K KYSRR+WD ++
Sbjct: 140 ETNAAVLKRRQKQIQYGKNTTGYLNYLQQVPKHLRDPKLHPSTPNKYKKYSRRSWDMQVR 199
Query: 88 SWRSRLHFWDPPNEN 102
WR LH WDPP+ +
Sbjct: 200 LWRRALHLWDPPSAS 214
>gi|47221334|emb|CAF97252.1| unnamed protein product [Tetraodon nigroviridis]
Length = 78
Score = 81.3 bits (199), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 40/75 (53%), Positives = 49/75 (65%), Gaps = 1/75 (1%)
Query: 29 ETDPAILLRRQKQIDFGKNTVGYDRYCSMVKREDR-TKDHPKTPPKELKYSRRAWDGLIK 87
ET+ A+L RRQKQI +GKNT GY Y V + R K HP TP K KYSRR+WD ++
Sbjct: 4 ETNAAVLKRRQKQIQYGKNTSGYQNYLLQVPKHLRDPKLHPSTPNKYRKYSRRSWDMQVR 63
Query: 88 SWRSRLHFWDPPNEN 102
WR LH WDPP ++
Sbjct: 64 LWRRALHMWDPPTDD 78
>gi|291229975|ref|XP_002734948.1| PREDICTED: stem-loop binding protein-like [Saccoglossus
kowalevskii]
Length = 408
Score = 81.3 bits (199), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 38/68 (55%), Positives = 46/68 (67%)
Query: 29 ETDPAILLRRQKQIDFGKNTVGYDRYCSMVKREDRTKDHPKTPPKELKYSRRAWDGLIKS 88
ETD +ILLRRQKQ+D+GKNT Y + V R R KDHP+TP K SRR+WD IK
Sbjct: 202 ETDESILLRRQKQLDYGKNTAVYGEFIQQVPRGKRCKDHPRTPNKYQVSSRRSWDMQIKL 261
Query: 89 WRSRLHFW 96
W+ +LH W
Sbjct: 262 WKKKLHNW 269
>gi|308800790|ref|XP_003075176.1| Histone mRNA stem-loop binding protein (ISS) [Ostreococcus tauri]
gi|116061730|emb|CAL52448.1| Histone mRNA stem-loop binding protein (ISS) [Ostreococcus tauri]
Length = 341
Score = 80.5 bits (197), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 43/88 (48%), Positives = 57/88 (64%), Gaps = 4/88 (4%)
Query: 15 SGPGTPGSGKKLAYETDPAILLRRQKQIDFGKNTVGYDRYCSMVKREDRTKDHPKTPPKE 74
S P T S +KL ETD L +RQ+QID+GKNT+GY RY +VK+ +R H TP
Sbjct: 35 SKPST--SNRKL--ETDSHKLKQRQRQIDYGKNTLGYARYVELVKKSERKSCHAWTPDIH 90
Query: 75 LKYSRRAWDGLIKSWRSRLHFWDPPNEN 102
S+RA+DG+++ WR LH +DPP EN
Sbjct: 91 AALSKRAFDGVVRKWRRLLHEYDPPVEN 118
>gi|392306963|ref|NP_001254730.1| stem loop binding protein 2 [Equus caballus]
gi|387165362|gb|AFJ59920.1| stem loop binding protein 2 [Equus caballus]
Length = 184
Score = 80.5 bits (197), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 40/87 (45%), Positives = 51/87 (58%), Gaps = 1/87 (1%)
Query: 16 GPGTPGSGKKLAYETDPAILLRRQKQIDFGKNTVGYDRYCSMVKREDRTKD-HPKTPPKE 74
G T + ETD +L RRQKQID+GK T GY + V + R HP+TP K
Sbjct: 5 GVSTESCHARWEVETDETVLQRRQKQIDYGKRTPGYQCFLQQVPKAQRQPGLHPQTPNKN 64
Query: 75 LKYSRRAWDGLIKSWRSRLHFWDPPNE 101
+YSRR+WD I+ WR LH WDPP++
Sbjct: 65 RRYSRRSWDAQIRQWRRALHSWDPPSQ 91
>gi|432090294|gb|ELK23727.1| Oocyte-specific histone RNA stem-loop-binding protein 2 [Myotis
davidii]
Length = 157
Score = 80.1 bits (196), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 40/87 (45%), Positives = 51/87 (58%), Gaps = 1/87 (1%)
Query: 16 GPGTPGSGKKLAYETDPAILLRRQKQIDFGKNTVGYDRYCSMVKREDRTKD-HPKTPPKE 74
G T + ETD +L RRQKQID+GK T GY + V + R HP+TP K
Sbjct: 33 GVSTEPCHARWKVETDETVLQRRQKQIDYGKRTPGYQCFLQQVPKAQRQPGLHPQTPNKN 92
Query: 75 LKYSRRAWDGLIKSWRSRLHFWDPPNE 101
+YSRR+WD I+ WR LH WDPP++
Sbjct: 93 RRYSRRSWDAQIRQWRKALHSWDPPSQ 119
>gi|431892616|gb|ELK03049.1| Protein FAM53C [Pteropus alecto]
Length = 609
Score = 80.1 bits (196), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 38/74 (51%), Positives = 48/74 (64%), Gaps = 1/74 (1%)
Query: 29 ETDPAILLRRQKQIDFGKNTVGYDRYCSMVKREDRTKD-HPKTPPKELKYSRRAWDGLIK 87
ETD +L RRQKQID+GK T GY + V + R HP+TP K +YSRR+WD I+
Sbjct: 50 ETDETVLQRRQKQIDYGKRTPGYQCFLQQVPKAQRQPGLHPQTPNKNRRYSRRSWDAQIR 109
Query: 88 SWRSRLHFWDPPNE 101
WR LH WDPP++
Sbjct: 110 QWRRALHSWDPPSQ 123
>gi|393716308|ref|NP_001257345.1| uncharacterized protein LOC100363294 [Rattus norvegicus]
gi|387165364|gb|AFJ59921.1| stem loop binding protein 2 [Rattus norvegicus]
Length = 169
Score = 80.1 bits (196), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 38/74 (51%), Positives = 48/74 (64%), Gaps = 1/74 (1%)
Query: 29 ETDPAILLRRQKQIDFGKNTVGYDRYCSMVKREDRTKD-HPKTPPKELKYSRRAWDGLIK 87
ETD +L RRQKQ+D+GK T GY + V R R HP+TP K +YSRR+WD I+
Sbjct: 26 ETDEVVLRRRQKQMDYGKCTPGYQSFLQQVPRAQRQPGFHPQTPNKNRRYSRRSWDAQIR 85
Query: 88 SWRSRLHFWDPPNE 101
WR LH WDPP++
Sbjct: 86 QWRRALHTWDPPSQ 99
>gi|328770487|gb|EGF80529.1| hypothetical protein BATDEDRAFT_88725 [Batrachochytrium
dendrobatidis JAM81]
Length = 481
Score = 79.7 bits (195), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 41/82 (50%), Positives = 55/82 (67%), Gaps = 6/82 (7%)
Query: 35 LLRRQKQIDFGKNTVGYDRYCSMVKREDRTKDHPKTPPKELKYSRRAWDGLIKSWRSRLH 94
L +RQKQID+GKNTVGY RY V + R + P+TP + K S+RAWD ++SWR RLH
Sbjct: 350 LEQRQKQIDYGKNTVGYRRYLECVPKNKRQRGDPETPERHSKCSKRAWDAHVRSWRRRLH 409
Query: 95 FWDPPNENGEPNSLLLDEDDDI 116
+DPP G+P+ +D D D+
Sbjct: 410 QYDPP---GDPS---VDCDKDM 425
>gi|387165360|gb|AFJ59919.1| stem loop binding protein 2 [Canis lupus familiaris]
Length = 203
Score = 79.0 bits (193), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 40/87 (45%), Positives = 52/87 (59%), Gaps = 1/87 (1%)
Query: 16 GPGTPGSGKKLAYETDPAILLRRQKQIDFGKNTVGYDRYCSMVKREDRTKD-HPKTPPKE 74
G T + ETD +L RRQKQID+GK T GY + V + R HP+TP K+
Sbjct: 29 GVSTEPCHSRWEVETDETVLQRRQKQIDYGKRTPGYQCFLQQVPKAKRQPGLHPQTPNKK 88
Query: 75 LKYSRRAWDGLIKSWRSRLHFWDPPNE 101
+YSRR+WD I+ WR LH WDPP++
Sbjct: 89 RRYSRRSWDAQIRQWRRALHSWDPPSQ 115
>gi|281182864|ref|NP_001161817.2| uncharacterized protein LOC474694 [Canis lupus familiaris]
Length = 265
Score = 78.6 bits (192), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 38/74 (51%), Positives = 49/74 (66%), Gaps = 1/74 (1%)
Query: 29 ETDPAILLRRQKQIDFGKNTVGYDRYCSMVKREDRTKD-HPKTPPKELKYSRRAWDGLIK 87
ETD +L RRQKQID+GK T GY + V + R HP+TP K+ +YSRR+WD I+
Sbjct: 101 ETDETVLQRRQKQIDYGKRTPGYQCFLQQVPKAKRQPGLHPQTPNKKRRYSRRSWDAQIR 160
Query: 88 SWRSRLHFWDPPNE 101
WR LH WDPP++
Sbjct: 161 QWRRALHSWDPPSQ 174
>gi|159474504|ref|XP_001695365.1| histone gene transcript 5' hairpin-binding protein [Chlamydomonas
reinhardtii]
gi|158275848|gb|EDP01623.1| histone gene transcript 5' hairpin-binding protein [Chlamydomonas
reinhardtii]
Length = 166
Score = 78.6 bits (192), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 42/109 (38%), Positives = 69/109 (63%), Gaps = 5/109 (4%)
Query: 35 LLRRQKQIDFGKNTVGYDRYCSMVKREDRTKDHPKTPPKELKYSRRAWDGLIKSWRSRLH 94
L +RQKQID+GKNT+GY RY ++ ++ R K P+TP L S+RA++GLIK WR +LH
Sbjct: 58 LAQRQKQIDYGKNTLGYQRYLQLIPKDKRQKGDPQTPDMHLNNSKRAFEGLIKVWRRQLH 117
Query: 95 FWDP-PNENGEPNSLL-LDEDDDISSLDSQ---SVDSLPCTPIQEWKRR 138
+D +E+ P ++L E ++S++S+ +V ++ +P + R
Sbjct: 118 KYDQDGDEDAGPGAVLSYAERARLASINSEGDVAVSAVASSPTNSSRSR 166
>gi|402587762|gb|EJW81697.1| hypothetical protein WUBG_07393 [Wuchereria bancrofti]
Length = 439
Score = 77.8 bits (190), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 47/110 (42%), Positives = 66/110 (60%), Gaps = 6/110 (5%)
Query: 25 KLAYETDPAILLRRQKQIDFGKNTVGYDRYCSMVKREDRTKDHPKTPPKELKYSRRAWDG 84
KL + + LLRR K+I+ K Y +Y + V R RTKD PKTP K ++YSRR+WD
Sbjct: 273 KLGWCRNEITLLRRSKEIEKAKGKPVYAKYLAKVPRHARTKDMPKTPNKYIQYSRRSWDK 332
Query: 85 LIKSWRSRLHFWDPPNENGEPNSLLLDE--DDDISSLDSQSVDSLPCTPI 132
++ W+ RL+ W +E + L L+E DDIS DS++V S PCT +
Sbjct: 333 QVRLWKRRLYEW--ADEEPTQSCLSLNESTSDDIS--DSETVSSSPCTLM 378
>gi|170587523|ref|XP_001898525.1| Slbp protein [Brugia malayi]
gi|158594000|gb|EDP32591.1| Slbp protein, putative [Brugia malayi]
Length = 476
Score = 77.8 bits (190), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 48/110 (43%), Positives = 64/110 (58%), Gaps = 6/110 (5%)
Query: 25 KLAYETDPAILLRRQKQIDFGKNTVGYDRYCSMVKREDRTKDHPKTPPKELKYSRRAWDG 84
KL + D LLRR K+I+ K Y +Y + V R RTKD PKTP K + YSRR+WD
Sbjct: 310 KLGWCRDEITLLRRSKEIEKAKGKPVYAKYLAKVPRHARTKDMPKTPNKYISYSRRSWDK 369
Query: 85 LIKSWRSRLHFWDPPNENGEPNSLLLDE--DDDISSLDSQSVDSLPCTPI 132
++ W+ RL+ W +E + L L+E DDIS DS+ V S PCT +
Sbjct: 370 QVRVWKRRLYEW--ADEEPTQSCLSLNESTSDDIS--DSEIVSSSPCTLM 415
>gi|156406757|ref|XP_001641211.1| predicted protein [Nematostella vectensis]
gi|156228349|gb|EDO49148.1| predicted protein [Nematostella vectensis]
Length = 73
Score = 77.8 bits (190), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 37/72 (51%), Positives = 47/72 (65%)
Query: 29 ETDPAILLRRQKQIDFGKNTVGYDRYCSMVKREDRTKDHPKTPPKELKYSRRAWDGLIKS 88
ETD L +RQKQID GKNTV Y R+ + + R R K+ P TP K + S R+W G ++
Sbjct: 2 ETDLHKLEKRQKQIDIGKNTVAYGRFSAQIPRSKRAKEDPSTPDKFQQCSTRSWVGQVRV 61
Query: 89 WRSRLHFWDPPN 100
WR RLH WDPP+
Sbjct: 62 WRRRLHSWDPPS 73
>gi|449677181|ref|XP_002161363.2| PREDICTED: uncharacterized protein LOC100207031 [Hydra
magnipapillata]
Length = 347
Score = 77.8 bits (190), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 36/72 (50%), Positives = 47/72 (65%)
Query: 29 ETDPAILLRRQKQIDFGKNTVGYDRYCSMVKREDRTKDHPKTPPKELKYSRRAWDGLIKS 88
ETD + R+KQI GKNT GY +Y + V R DRT HP TP K S R+W G+++
Sbjct: 216 ETDEQRIKNREKQIAIGKNTEGYRKYIAEVPRSDRTPVHPWTPDKYSVCSTRSWQGVMRI 275
Query: 89 WRSRLHFWDPPN 100
WR +LH+WDPP+
Sbjct: 276 WRRKLHYWDPPH 287
>gi|122114551|ref|NP_001073645.1| uncharacterized protein LOC558918 [Danio rerio]
gi|120537563|gb|AAI29496.1| Zgc:158856 [Danio rerio]
Length = 326
Score = 77.4 bits (189), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 37/74 (50%), Positives = 46/74 (62%), Gaps = 1/74 (1%)
Query: 28 YETDPAILLRRQKQIDFGKNTVGYDRYCSMVKREDRTKD-HPKTPPKELKYSRRAWDGLI 86
+E + A+L RRQKQI +GKNT GY Y V + R HP TP K KYSRR+WD +
Sbjct: 128 FEINEAVLKRRQKQIQYGKNTCGYQNYVQQVPKRLRVPGIHPSTPNKYRKYSRRSWDMQV 187
Query: 87 KSWRSRLHFWDPPN 100
+ WR LH WD P+
Sbjct: 188 RLWRRALHAWDLPS 201
>gi|412990363|emb|CCO19681.1| histone RNA hairpin-binding protein [Bathycoccus prasinos]
Length = 140
Score = 75.1 bits (183), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 34/66 (51%), Positives = 46/66 (69%)
Query: 35 LLRRQKQIDFGKNTVGYDRYCSMVKREDRTKDHPKTPPKELKYSRRAWDGLIKSWRSRLH 94
+L+RQKQID+GKNTVGY++Y +V R R PKTP + S+RA+DG++K WR LH
Sbjct: 10 ILQRQKQIDYGKNTVGYEKYLKLVPRSKRGPTDPKTPNIYISNSKRAFDGIVKKWRRELH 69
Query: 95 FWDPPN 100
+D N
Sbjct: 70 RYDREN 75
>gi|145343490|ref|XP_001416355.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144576580|gb|ABO94648.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 334
Score = 75.1 bits (183), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 41/95 (43%), Positives = 54/95 (56%), Gaps = 2/95 (2%)
Query: 12 NKKSGPGTPGSGKKLAY--ETDPAILLRRQKQIDFGKNTVGYDRYCSMVKREDRTKDHPK 69
N +G GSG ETDP L +RQ+QID+GKNT+GY RY +V + R
Sbjct: 101 NAAAGDARRGSGDDATTREETDPHKLRQRQRQIDYGKNTLGYARYRELVAKSARRSSDAW 160
Query: 70 TPPKELKYSRRAWDGLIKSWRSRLHFWDPPNENGE 104
TP S+RA+DG ++ WR LH +DPP E+ E
Sbjct: 161 TPNIRAGMSKRAFDGAVRKWRRLLHAYDPPVEDDE 195
>gi|167537129|ref|XP_001750234.1| hypothetical protein [Monosiga brevicollis MX1]
gi|163771224|gb|EDQ84893.1| predicted protein [Monosiga brevicollis MX1]
Length = 417
Score = 73.2 bits (178), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 35/79 (44%), Positives = 51/79 (64%)
Query: 29 ETDPAILLRRQKQIDFGKNTVGYDRYCSMVKREDRTKDHPKTPPKELKYSRRAWDGLIKS 88
E D L +R+K I GKNT+GY Y + RE+RT +HP TPP E K S+RA+D +++
Sbjct: 239 EDDQHRLSQRRKAIMMGKNTIGYQNYLRTIPRENRTSEHPTTPPPEAKCSKRAFDSWVRN 298
Query: 89 WRSRLHFWDPPNENGEPNS 107
WR LH +D +++ P+S
Sbjct: 299 WRRALHQFDTIDQDSGPDS 317
>gi|320166353|gb|EFW43252.1| hypothetical protein CAOG_01296 [Capsaspora owczarzaki ATCC 30864]
Length = 327
Score = 72.8 bits (177), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 47/121 (38%), Positives = 65/121 (53%), Gaps = 23/121 (19%)
Query: 21 GSGKKLAYETDPAILLRRQKQIDFGKNTVGYDRYCSMVKREDRTKD-HPKTPPKELKYSR 79
G+ ++ AYETD L +RQ+QI+ GK Y RY V ++ R + HP TP K + S+
Sbjct: 199 GAPQQPAYETDAHKLEQRQRQINLGKQKPEYARYIEAVPKDQRIRGVHPTTPDKFMTASK 258
Query: 80 RAWDGLIKSWRSRLHFWDPP-------------------NENGEPNSL-LLDEDDDISSL 119
R +DGLIK WR +LH WD P N+NG N L LDE + I+++
Sbjct: 259 RQFDGLIKVWRRQLHRWDEPASATGASQPAEDGADSAEDNQNG--NELEELDEYEAIAAM 316
Query: 120 D 120
D
Sbjct: 317 D 317
>gi|330804506|ref|XP_003290235.1| hypothetical protein DICPUDRAFT_80982 [Dictyostelium purpureum]
gi|325079652|gb|EGC33242.1| hypothetical protein DICPUDRAFT_80982 [Dictyostelium purpureum]
Length = 361
Score = 72.8 bits (177), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 36/70 (51%), Positives = 44/70 (62%)
Query: 29 ETDPAILLRRQKQIDFGKNTVGYDRYCSMVKREDRTKDHPKTPPKELKYSRRAWDGLIKS 88
ETD + +RQKQIDFGKNT+GYD Y V ++ R PKTP SRR+W G +K
Sbjct: 212 ETDEDKIKKRQKQIDFGKNTLGYDNYIKSVPKDKRKFTDPKTPDIYQSCSRRSWVGQVKK 271
Query: 89 WRSRLHFWDP 98
WR LH +DP
Sbjct: 272 WRRLLHEYDP 281
>gi|66817964|ref|XP_642675.1| hypothetical protein DDB_G0277383 [Dictyostelium discoideum AX4]
gi|60470775|gb|EAL68748.1| hypothetical protein DDB_G0277383 [Dictyostelium discoideum AX4]
Length = 496
Score = 72.4 bits (176), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 39/81 (48%), Positives = 47/81 (58%), Gaps = 1/81 (1%)
Query: 15 SGPGTPGSGKKLAY-ETDPAILLRRQKQIDFGKNTVGYDRYCSMVKREDRTKDHPKTPPK 73
+ P T S KK ETDP L RQ+QID GK T GY Y ++V + R PKTP K
Sbjct: 370 ATPSTNESPKKTPLKETDPKRLAARQRQIDIGKMTAGYKNYIALVPKSKRKPTDPKTPNK 429
Query: 74 ELKYSRRAWDGLIKSWRSRLH 94
S+R+WDG IK WR +LH
Sbjct: 430 NQVCSKRSWDGQIKKWRRQLH 450
>gi|330796929|ref|XP_003286516.1| hypothetical protein DICPUDRAFT_94190 [Dictyostelium purpureum]
gi|325083497|gb|EGC36948.1| hypothetical protein DICPUDRAFT_94190 [Dictyostelium purpureum]
Length = 473
Score = 72.0 bits (175), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 34/70 (48%), Positives = 41/70 (58%)
Query: 29 ETDPAILLRRQKQIDFGKNTVGYDRYCSMVKREDRTKDHPKTPPKELKYSRRAWDGLIKS 88
E DP L RQ+QID GK T GY Y + V + R PKTP K S+R+WDG +K
Sbjct: 358 EIDPKRLAARQRQIDIGKMTAGYKNYIATVPKSKRKPTDPKTPNKNQVCSKRSWDGQVKK 417
Query: 89 WRSRLHFWDP 98
WR LH +DP
Sbjct: 418 WRRLLHQYDP 427
>gi|384245904|gb|EIE19396.1| hypothetical protein COCSUDRAFT_44731 [Coccomyxa subellipsoidea
C-169]
Length = 222
Score = 71.6 bits (174), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 37/91 (40%), Positives = 52/91 (57%), Gaps = 7/91 (7%)
Query: 29 ETDPAILLRRQKQIDFGKNTVGYDRYCSMVKREDRTK-------DHPKTPPKELKYSRRA 81
ETDP L +R +QI +GKNT+GY Y V ++ R + HP TP S+RA
Sbjct: 28 ETDPHRLEQRLRQITYGKNTLGYASYTKAVPKDKRKRAKKGEENTHPVTPDIHQMCSKRA 87
Query: 82 WDGLIKSWRSRLHFWDPPNENGEPNSLLLDE 112
+DG ++ WR +LHFWDP E E +++E
Sbjct: 88 FDGQVRKWRRQLHFWDPKPEGDEIKIEVVNE 118
>gi|328873624|gb|EGG21991.1| hypothetical protein DFA_01877 [Dictyostelium fasciculatum]
Length = 442
Score = 71.6 bits (174), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 34/77 (44%), Positives = 47/77 (61%)
Query: 22 SGKKLAYETDPAILLRRQKQIDFGKNTVGYDRYCSMVKREDRTKDHPKTPPKELKYSRRA 81
S KK+ E +P L RQ+Q+D GK T+GY + + V + R K PKTP K S+R+
Sbjct: 301 SLKKILKEDNPKRLQARQRQLDIGKATIGYKTFSTAVSKSKRKKSDPKTPNKNQICSKRS 360
Query: 82 WDGLIKSWRSRLHFWDP 98
WDG ++ WR LH +DP
Sbjct: 361 WDGQVRKWRRLLHQYDP 377
>gi|256075897|ref|XP_002574252.1| slbp-P1-related [Schistosoma mansoni]
gi|353229537|emb|CCD75708.1| slbp-P1-related [Schistosoma mansoni]
Length = 357
Score = 71.2 bits (173), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 35/66 (53%), Positives = 42/66 (63%)
Query: 35 LLRRQKQIDFGKNTVGYDRYCSMVKREDRTKDHPKTPPKELKYSRRAWDGLIKSWRSRLH 94
LLRRQK ID GK T Y Y + + +R K HP+TP K K SRRAWDG+I+ WR LH
Sbjct: 88 LLRRQKDIDMGKVTERYAEYVLSIPKPERQKYHPRTPNKFRKVSRRAWDGMIRKWRKHLH 147
Query: 95 FWDPPN 100
+D N
Sbjct: 148 NFDNLN 153
>gi|340370878|ref|XP_003383973.1| PREDICTED: hypothetical protein LOC100632191 [Amphimedon
queenslandica]
Length = 342
Score = 71.2 bits (173), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 35/76 (46%), Positives = 45/76 (59%)
Query: 30 TDPAILLRRQKQIDFGKNTVGYDRYCSMVKREDRTKDHPKTPPKELKYSRRAWDGLIKSW 89
TD L +RQKQI+ GKNT+GY+ Y + + + R P TP K K S RAW G + W
Sbjct: 240 TDGHRLAQRQKQIEMGKNTIGYESYIATLPKASRRHSDPWTPDKYKKCSTRAWQGQYRLW 299
Query: 90 RSRLHFWDPPNENGEP 105
R LH WDPP+ + P
Sbjct: 300 RKSLHRWDPPSASTVP 315
>gi|226467636|emb|CAX69694.1| Histone RNA hairpin-binding protein [Schistosoma japonicum]
Length = 420
Score = 71.2 bits (173), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 35/66 (53%), Positives = 42/66 (63%)
Query: 35 LLRRQKQIDFGKNTVGYDRYCSMVKREDRTKDHPKTPPKELKYSRRAWDGLIKSWRSRLH 94
LLRRQK ID GK T Y Y + + +R K HP+TP K K SRRAWDG+I+ WR LH
Sbjct: 196 LLRRQKDIDMGKVTERYAEYVLSIPKPERQKFHPRTPNKFRKVSRRAWDGMIRKWRKHLH 255
Query: 95 FWDPPN 100
+D N
Sbjct: 256 NFDDLN 261
>gi|313231976|emb|CBY09088.1| unnamed protein product [Oikopleura dioica]
Length = 341
Score = 70.5 bits (171), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 34/80 (42%), Positives = 48/80 (60%), Gaps = 4/80 (5%)
Query: 21 GSGKKLAY----ETDPAILLRRQKQIDFGKNTVGYDRYCSMVKREDRTKDHPKTPPKELK 76
GS ++ Y ETDP L RR++QI++GK T Y Y + V + DR K P TP K+
Sbjct: 201 GSNRRNTYIAEVETDPKTLARREQQIEYGKVTDDYAAYSAEVAKADRVKGQPVTPRKDQV 260
Query: 77 YSRRAWDGLIKSWRSRLHFW 96
SRR +D I+ W+ ++HFW
Sbjct: 261 ISRRNFDNQIRKWKKQIHFW 280
>gi|281205675|gb|EFA79864.1| hypothetical protein PPL_06684 [Polysphondylium pallidum PN500]
Length = 523
Score = 70.1 bits (170), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 39/96 (40%), Positives = 55/96 (57%), Gaps = 1/96 (1%)
Query: 33 AILLRRQKQIDFGKNTVGYDRYCSMVKREDRTKDHPKTPPKELKYSRRAWDGLIKSWRSR 92
A L RQ+QID GK T+GY Y + VK+ R K P+TP K S+R+W+G I WR
Sbjct: 386 AKLKSRQRQIDIGKQTLGYQAYIAAVKKSRRKKTDPRTPNKNQVCSKRSWEGQIGKWRRL 445
Query: 93 LHFWDPPNE-NGEPNSLLLDEDDDISSLDSQSVDSL 127
LH +DP + + E + LD+D D D + +S+
Sbjct: 446 LHQFDPADALSKEMIDIALDDDSDYIMSDQPTTNSI 481
>gi|312089895|ref|XP_003146414.1| hypothetical protein LOAG_10843 [Loa loa]
gi|307758422|gb|EFO17656.1| hypothetical protein LOAG_10843 [Loa loa]
Length = 432
Score = 69.7 bits (169), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 40/102 (39%), Positives = 59/102 (57%), Gaps = 2/102 (1%)
Query: 25 KLAYETDPAILLRRQKQIDFGKNTVGYDRYCSMVKREDRTKDHPKTPPKELKYSRRAWDG 84
KL + D LLRR K+I+ K Y +Y + V R RTK+ PKTP K ++YSRR+WD
Sbjct: 269 KLGWCKDETTLLRRSKEIEKAKEKPVYAKYLAKVPRHARTKNMPKTPNKYIQYSRRSWDK 328
Query: 85 LIKSWRSRLHFWDPPNENGEPNSLLLDEDDDISSLDSQSVDS 126
++ W+ RL+ W +E + L L+E + DS++V S
Sbjct: 329 QMRLWKRRLYEW--ADEEPTKSCLSLNESTGDETSDSETVSS 368
>gi|358332348|dbj|GAA51014.1| histone RNA hairpin-binding protein [Clonorchis sinensis]
Length = 317
Score = 68.2 bits (165), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 33/63 (52%), Positives = 41/63 (65%)
Query: 35 LLRRQKQIDFGKNTVGYDRYCSMVKREDRTKDHPKTPPKELKYSRRAWDGLIKSWRSRLH 94
LLRRQK ID GK T Y Y V + +R + HP+TP K K SRRAWDG+I+ WR LH
Sbjct: 13 LLRRQKDIDMGKVTDRYAEYVLSVPKPERERYHPRTPNKFRKVSRRAWDGMIRKWRKHLH 72
Query: 95 FWD 97
++
Sbjct: 73 NFE 75
>gi|397643366|gb|EJK75813.1| hypothetical protein THAOC_02451 [Thalassiosira oceanica]
Length = 333
Score = 67.0 bits (162), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 27/69 (39%), Positives = 45/69 (65%), Gaps = 3/69 (4%)
Query: 35 LLRRQKQIDFGKNTVGYDRYCSMV---KREDRTKDHPKTPPKELKYSRRAWDGLIKSWRS 91
+ +R++Q++FGKNT+GY+ Y + +R+ R DHP+TP + R W G++ +WR
Sbjct: 149 IHQRRRQVNFGKNTIGYEEYAKQIPKHRRKPRCPDHPQTPDYTMDIPARRWQGMLNAWRR 208
Query: 92 RLHFWDPPN 100
LH +DPP+
Sbjct: 209 ALHKFDPPD 217
>gi|324506057|gb|ADY42593.1| Histone RNA hairpin-binding protein [Ascaris suum]
Length = 368
Score = 66.2 bits (160), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 36/93 (38%), Positives = 51/93 (54%), Gaps = 1/93 (1%)
Query: 25 KLAYETDPAILLRRQKQIDFGKNTVGYDRYCSMVKREDRTKDHPKTPPKELKYSRRAWDG 84
KL + TD + RR K+I K Y RY + V +E+R DHPKTP K + YSRR+WD
Sbjct: 209 KLGWCTDQVTIDRRTKEIAKAKEKPVYARYLAEVPKEERKSDHPKTPNKYINYSRRSWDS 268
Query: 85 LIKSWRSRLHFWDPPNENGEPN-SLLLDEDDDI 116
++ W+ L+ W + N S+ D + DI
Sbjct: 269 QMRIWKRSLYVWGGEEISSSCNTSICSDSEHDI 301
>gi|339254586|ref|XP_003372516.1| hypothetical protein Tsp_10275 [Trichinella spiralis]
gi|316967046|gb|EFV51539.1| hypothetical protein Tsp_10275 [Trichinella spiralis]
Length = 307
Score = 65.9 bits (159), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 33/70 (47%), Positives = 41/70 (58%), Gaps = 1/70 (1%)
Query: 26 LAYETDPAILLRRQKQIDFGKNTVGYDRYCSMVKREDRTKD-HPKTPPKELKYSRRAWDG 84
A ETD IL RR K I G N Y Y + V ++ R K HP TP KELK+SRR+WD
Sbjct: 169 FAKETDENILARRTKDIQKGYNCEAYKHYLNAVPKDARIKGVHPVTPTKELKFSRRSWDA 228
Query: 85 LIKSWRSRLH 94
++ WR +H
Sbjct: 229 QVRLWRRNIH 238
>gi|223996241|ref|XP_002287794.1| hypothetical protein THAPSDRAFT_268247 [Thalassiosira pseudonana
CCMP1335]
gi|220976910|gb|EED95237.1| hypothetical protein THAPSDRAFT_268247 [Thalassiosira pseudonana
CCMP1335]
Length = 248
Score = 65.1 bits (157), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 30/69 (43%), Positives = 42/69 (60%), Gaps = 3/69 (4%)
Query: 35 LLRRQKQIDFGKNTVGYDRYCSMV---KREDRTKDHPKTPPKELKYSRRAWDGLIKSWRS 91
+ +R++Q+ FGKNT GY+ Y V KR R DHP TP + S R W G++ +WR
Sbjct: 63 IHQRRRQVLFGKNTAGYECYTKQVPRHKRRLRCADHPMTPDHLVDVSARRWQGMMNAWRR 122
Query: 92 RLHFWDPPN 100
LH +DPP+
Sbjct: 123 SLHKFDPPD 131
>gi|268532176|ref|XP_002631216.1| C. briggsae CBR-CDL-1 protein [Caenorhabditis briggsae]
Length = 381
Score = 63.9 bits (154), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 33/70 (47%), Positives = 42/70 (60%), Gaps = 1/70 (1%)
Query: 26 LAYETDPAILLRRQKQIDFGKNTVGYDRYCSMVKREDRTK-DHPKTPPKELKYSRRAWDG 84
L + TD A+L RR ++ID K Y RY S V DR K HP+TP K + YSRR+WD
Sbjct: 215 LGWCTDDAVLKRRSREIDRAKEKAVYQRYISEVPLRDRVKGTHPRTPNKLINYSRRSWDT 274
Query: 85 LIKSWRSRLH 94
IK W+ L+
Sbjct: 275 QIKKWKRSLY 284
>gi|308509386|ref|XP_003116876.1| CRE-CDL-1 protein [Caenorhabditis remanei]
gi|308241790|gb|EFO85742.1| CRE-CDL-1 protein [Caenorhabditis remanei]
Length = 382
Score = 62.8 bits (151), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 32/70 (45%), Positives = 42/70 (60%), Gaps = 1/70 (1%)
Query: 26 LAYETDPAILLRRQKQIDFGKNTVGYDRYCSMVKREDRTK-DHPKTPPKELKYSRRAWDG 84
L + TD A+L RR ++ID K Y RY S V DR K HP+TP K + +SRR+WD
Sbjct: 217 LGWCTDDAVLKRRSREIDRAKEKAVYQRYISEVPIRDRVKGQHPRTPNKLINFSRRSWDT 276
Query: 85 LIKSWRSRLH 94
IK W+ L+
Sbjct: 277 QIKKWKRSLY 286
>gi|71993388|ref|NP_496320.3| Protein CDL-1 [Caenorhabditis elegans]
gi|1353156|sp|Q09599.1|SLBP_CAEEL RecName: Full=Histone RNA hairpin-binding protein; AltName:
Full=Histone stem-loop-binding protein
gi|1752650|emb|CAA71200.1| histone RNA hairpin-binding protein [Caenorhabditis elegans]
gi|3878908|emb|CAA86782.1| Protein CDL-1 [Caenorhabditis elegans]
gi|18147775|dbj|BAB83255.1| histone stem-loop binding protein CDL-1 [Caenorhabditis elegans]
Length = 367
Score = 62.8 bits (151), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 32/70 (45%), Positives = 42/70 (60%), Gaps = 1/70 (1%)
Query: 26 LAYETDPAILLRRQKQIDFGKNTVGYDRYCSMVKREDRTK-DHPKTPPKELKYSRRAWDG 84
L + TD A+L RR ++ID K Y RY S V DR K HP+TP K + +SRR+WD
Sbjct: 203 LGWCTDEAVLKRRSREIDRAKEKAVYQRYTSEVPLRDRIKGQHPRTPNKLINFSRRSWDT 262
Query: 85 LIKSWRSRLH 94
IK W+ L+
Sbjct: 263 QIKKWKRSLY 272
>gi|341888986|gb|EGT44921.1| CBN-CDL-1 protein [Caenorhabditis brenneri]
Length = 385
Score = 62.0 bits (149), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 33/70 (47%), Positives = 41/70 (58%), Gaps = 1/70 (1%)
Query: 26 LAYETDPAILLRRQKQIDFGKNTVGYDRYCSMVKREDRTK-DHPKTPPKELKYSRRAWDG 84
L + TD A L RR ++ID K Y RY S V DR K HP+TP K + YSRR+WD
Sbjct: 217 LGWCTDDATLKRRSREIDRAKEKAVYQRYISEVPIRDRIKGQHPRTPNKLINYSRRSWDT 276
Query: 85 LIKSWRSRLH 94
IK W+ L+
Sbjct: 277 QIKKWKRSLY 286
>gi|255070941|ref|XP_002507552.1| hypothetical protein MICPUN_112727 [Micromonas sp. RCC299]
gi|226522827|gb|ACO68810.1| hypothetical protein MICPUN_112727 [Micromonas sp. RCC299]
Length = 158
Score = 61.2 bits (147), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 31/64 (48%), Positives = 41/64 (64%), Gaps = 3/64 (4%)
Query: 38 RQKQIDFGKNTVGYDRYCSMVKREDRTKD---HPKTPPKELKYSRRAWDGLIKSWRSRLH 94
R KQIDFG NT+GY RY +V ++ R+ + HP+TP S+R +DG IK WR LH
Sbjct: 9 RFKQIDFGYNTLGYARYIKLVPKDARSCEVSRHPRTPDPYQSCSKRNFDGQIKKWRRLLH 68
Query: 95 FWDP 98
+DP
Sbjct: 69 AYDP 72
>gi|167383521|ref|XP_001736566.1| hypothetical protein [Entamoeba dispar SAW760]
gi|165900982|gb|EDR27182.1| hypothetical protein EDI_245220 [Entamoeba dispar SAW760]
Length = 196
Score = 61.2 bits (147), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 27/60 (45%), Positives = 36/60 (60%)
Query: 38 RQKQIDFGKNTVGYDRYCSMVKREDRTKDHPKTPPKELKYSRRAWDGLIKSWRSRLHFWD 97
RQKQI FGK TV Y Y +++ + R PKTP E S+R WD +++ WR LH +D
Sbjct: 92 RQKQITFGKGTVEYQNYSAIIPKNQRRTTDPKTPDIECNVSKRKWDQIVRRWRRALHAFD 151
>gi|407043037|gb|EKE41692.1| hypothetical protein ENU1_047160 [Entamoeba nuttalli P19]
Length = 196
Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 27/60 (45%), Positives = 36/60 (60%)
Query: 38 RQKQIDFGKNTVGYDRYCSMVKREDRTKDHPKTPPKELKYSRRAWDGLIKSWRSRLHFWD 97
RQKQI FGK TV Y Y +++ + R PKTP E S+R WD +++ WR LH +D
Sbjct: 92 RQKQITFGKGTVEYQNYNAIIPKNQRRTTDPKTPDIECNVSKRKWDQIVRRWRRALHAFD 151
>gi|196013823|ref|XP_002116772.1| hypothetical protein TRIADDRAFT_60746 [Trichoplax adhaerens]
gi|190580750|gb|EDV20831.1| hypothetical protein TRIADDRAFT_60746 [Trichoplax adhaerens]
Length = 293
Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 35/77 (45%), Positives = 46/77 (59%), Gaps = 9/77 (11%)
Query: 58 VKREDRTKDHPKTPPKELKYSRRAWDGLIKSWRSRLHFWDPPN---------ENGEPNSL 108
+KR++RTKDHP+TP K +K SRR++D IK WR +LH +DPP N E SL
Sbjct: 214 LKRQERTKDHPRTPDKNIKVSRRSFDMQIKLWRKKLHEFDPPEIKQVWETQRSNEEFLSL 273
Query: 109 LLDEDDDISSLDSQSVD 125
LD + DI D+ D
Sbjct: 274 PLDCNGDIMMSDANETD 290
>gi|183229966|ref|XP_657327.2| hypothetical protein [Entamoeba histolytica HM-1:IMSS]
gi|169803091|gb|EAL51947.2| hypothetical protein EHI_045140 [Entamoeba histolytica HM-1:IMSS]
Length = 196
Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 27/60 (45%), Positives = 36/60 (60%)
Query: 38 RQKQIDFGKNTVGYDRYCSMVKREDRTKDHPKTPPKELKYSRRAWDGLIKSWRSRLHFWD 97
RQKQI FGK TV Y Y +++ + R PKTP E S+R WD +++ WR LH +D
Sbjct: 92 RQKQITFGKGTVEYQNYNAIIPKNQRRTTDPKTPDIECNVSKRKWDQIVRRWRRALHAFD 151
>gi|67481835|ref|XP_656267.1| histone RNA hairpin-binding protein [Entamoeba histolytica
HM-1:IMSS]
gi|56473455|gb|EAL50881.1| histone RNA hairpin-binding protein, putative [Entamoeba
histolytica HM-1:IMSS]
gi|449710333|gb|EMD49431.1| histone RNA hairpin-binding protein, putative [Entamoeba
histolytica KU27]
Length = 216
Score = 59.7 bits (143), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 29/69 (42%), Positives = 38/69 (55%)
Query: 29 ETDPAILLRRQKQIDFGKNTVGYDRYCSMVKREDRTKDHPKTPPKELKYSRRAWDGLIKS 88
E DP L R KQ+ +GK T GY Y V +R + PKTP S+R+WDG ++
Sbjct: 94 EEDPKKLDTRHKQVSYGKVTEGYANYVKFVPVSERIRGDPKTPDIHQSCSKRSWDGQVRK 153
Query: 89 WRSRLHFWD 97
WR LH +D
Sbjct: 154 WRRALHAFD 162
>gi|407043379|gb|EKE41919.1| histone RNA hairpin-binding protein, putative [Entamoeba nuttalli
P19]
Length = 216
Score = 59.7 bits (143), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 29/69 (42%), Positives = 38/69 (55%)
Query: 29 ETDPAILLRRQKQIDFGKNTVGYDRYCSMVKREDRTKDHPKTPPKELKYSRRAWDGLIKS 88
E DP L R KQ+ +GK T GY Y V +R + PKTP S+R+WDG ++
Sbjct: 94 EEDPKKLDTRHKQVSYGKVTEGYANYVKFVPVSERIRGDPKTPDIHQSCSKRSWDGQVRK 153
Query: 89 WRSRLHFWD 97
WR LH +D
Sbjct: 154 WRRALHAFD 162
>gi|303274432|ref|XP_003056536.1| hypothetical protein MICPUCDRAFT_55661 [Micromonas pusilla
CCMP1545]
gi|226462620|gb|EEH59912.1| hypothetical protein MICPUCDRAFT_55661 [Micromonas pusilla
CCMP1545]
Length = 165
Score = 59.3 bits (142), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 30/70 (42%), Positives = 44/70 (62%), Gaps = 3/70 (4%)
Query: 31 DPAILLRRQKQIDFGKNTVGYDRYCSMVKREDRTKD---HPKTPPKELKYSRRAWDGLIK 87
D + L+ R+KQ+D G NT+GY RY +V R R+ + HP+TP S+R++DG I+
Sbjct: 2 DRSRLVLRRKQLDLGYNTIGYARYVQLVPRGRRSTNLRRHPRTPDPLRDCSKRSFDGQIR 61
Query: 88 SWRSRLHFWD 97
WR LH +D
Sbjct: 62 RWRRLLHQYD 71
>gi|440290948|gb|ELP84247.1| hypothetical protein EIN_064820 [Entamoeba invadens IP1]
Length = 215
Score = 59.3 bits (142), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 30/69 (43%), Positives = 39/69 (56%)
Query: 29 ETDPAILLRRQKQIDFGKNTVGYDRYCSMVKREDRTKDHPKTPPKELKYSRRAWDGLIKS 88
ETD + R+KQI +GK T GY Y V E R + PKTP S+R+WDG ++
Sbjct: 93 ETDSRKVEAREKQITYGKATEGYKNYTHYVPYESRQFNDPKTPEINQVCSKRSWDGQVRK 152
Query: 89 WRSRLHFWD 97
WR LH +D
Sbjct: 153 WRRELHAFD 161
>gi|167393473|ref|XP_001740589.1| hypothetical protein [Entamoeba dispar SAW760]
gi|165895252|gb|EDR22989.1| hypothetical protein EDI_296610 [Entamoeba dispar SAW760]
Length = 216
Score = 59.3 bits (142), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 29/69 (42%), Positives = 38/69 (55%)
Query: 29 ETDPAILLRRQKQIDFGKNTVGYDRYCSMVKREDRTKDHPKTPPKELKYSRRAWDGLIKS 88
E DP L R KQ+ +GK T GY Y V +R + PKTP S+R+WDG ++
Sbjct: 94 EEDPKKLDTRSKQVSYGKVTEGYANYVKFVPVSERIRGDPKTPDIHQSCSKRSWDGQVRK 153
Query: 89 WRSRLHFWD 97
WR LH +D
Sbjct: 154 WRRALHAFD 162
>gi|303274434|ref|XP_003056537.1| predicted protein [Micromonas pusilla CCMP1545]
gi|226462621|gb|EEH59913.1| predicted protein [Micromonas pusilla CCMP1545]
Length = 106
Score = 58.5 bits (140), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 30/71 (42%), Positives = 44/71 (61%), Gaps = 3/71 (4%)
Query: 30 TDPAILLRRQKQIDFGKNTVGYDRYCSMVKREDRTKD---HPKTPPKELKYSRRAWDGLI 86
D + L+ R+KQ+D G NT+GY RY +V R R+ + HP+TP S+R++DG I
Sbjct: 1 MDRSRLVLRRKQLDLGYNTIGYARYVQLVPRGRRSTNLRRHPRTPDPLRDCSKRSFDGQI 60
Query: 87 KSWRSRLHFWD 97
+ WR LH +D
Sbjct: 61 RRWRRLLHQYD 71
>gi|302844666|ref|XP_002953873.1| hypothetical protein VOLCADRAFT_106146 [Volvox carteri f.
nagariensis]
gi|300260981|gb|EFJ45197.1| hypothetical protein VOLCADRAFT_106146 [Volvox carteri f.
nagariensis]
Length = 530
Score = 57.8 bits (138), Expect = 1e-06, Method: Composition-based stats.
Identities = 42/135 (31%), Positives = 61/135 (45%), Gaps = 25/135 (18%)
Query: 9 TNANKKSGPGTPGSGKKLAYETDPAILLRRQKQIDFGKNTVGYDRYCSMVKREDRTKD-- 66
+N ++ SG P K+ DP L +RQKQ+D+GKNT+GY RY V +E R +
Sbjct: 41 SNGSQSSGGALP---KQPIASLDPHRLAQRQKQVDYGKNTIGYQRYLQQVPKEKRRRKGE 97
Query: 67 ---HPKTPPKELKYSRRAWDGLIKSWRSRLHFWDPPNENGEPNSLLLDEDDDISSLDSQS 123
P TP S+R +DG R+RL E DD + D +
Sbjct: 98 QWLDPVTPDINQNISKRCFDGQFAE-RTRLQ----------------KERDDAAIEDITA 140
Query: 124 VDSLPCTPIQEWKRR 138
V ++P +P + R
Sbjct: 141 VSAIPSSPTNSSRSR 155
>gi|297282144|ref|XP_002802217.1| PREDICTED: histone RNA hairpin-binding protein-like [Macaca
mulatta]
Length = 264
Score = 57.4 bits (137), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 32/69 (46%), Positives = 38/69 (55%), Gaps = 8/69 (11%)
Query: 67 HPKTPPKELKYSRRAWDGLIKSWRSRLHFWDPPNENGEPNSLLLDEDDDISS-------- 118
HPKTP K KYSRR+WD IK W+ LHFWDPP E G + +D D+ S
Sbjct: 179 HPKTPNKFKKYSRRSWDQQIKLWKVALHFWDPPAEEGCDLQEISQDDFDVYSGTPTKVRH 238
Query: 119 LDSQSVDSL 127
+DSQ D
Sbjct: 239 MDSQVEDEF 247
>gi|48869185|gb|AAT47181.1| histone stem loop binding protein [Bos taurus]
Length = 147
Score = 56.2 bits (134), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 24/37 (64%), Positives = 27/37 (72%)
Query: 67 HPKTPPKELKYSRRAWDGLIKSWRSRLHFWDPPNENG 103
HPKTP K KYSRR+WD I+ W+ LHFWDPP E G
Sbjct: 40 HPKTPNKFKKYSRRSWDQQIRLWKVALHFWDPPAEEG 76
>gi|330799072|ref|XP_003287572.1| hypothetical protein DICPUDRAFT_151672 [Dictyostelium purpureum]
gi|325082436|gb|EGC35918.1| hypothetical protein DICPUDRAFT_151672 [Dictyostelium purpureum]
Length = 140
Score = 55.1 bits (131), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 29/67 (43%), Positives = 39/67 (58%), Gaps = 3/67 (4%)
Query: 34 ILLRRQKQIDFGKNTVGYDRYCSMVKRE---DRTKDHPKTPPKELKYSRRAWDGLIKSWR 90
IL+ RQKQID+GKNT GY Y ++ ++ K P K S+R++DG IK WR
Sbjct: 36 ILIARQKQIDYGKNTQGYKNYIELLNSNPNFMNETNNVKIPCIFQKCSKRSFDGQIKKWR 95
Query: 91 SRLHFWD 97
LH +D
Sbjct: 96 RFLHQFD 102
>gi|219112479|ref|XP_002177991.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
gi|217410876|gb|EEC50805.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
Length = 230
Score = 55.1 bits (131), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 28/67 (41%), Positives = 37/67 (55%), Gaps = 3/67 (4%)
Query: 35 LLRRQKQIDFGKNTVGYDRYCSMV---KREDRTKDHPKTPPKELKYSRRAWDGLIKSWRS 91
+ +RQK I GKNT GYD Y V +R R+ D P TP + W GL+++WR
Sbjct: 58 VAQRQKMIAKGKNTAGYDAYRRQVPVEQRRPRSMDTPSTPDVHRDVPNKRWQGLVRAWRV 117
Query: 92 RLHFWDP 98
LH +DP
Sbjct: 118 ALHKYDP 124
>gi|354473582|ref|XP_003499013.1| PREDICTED: histone RNA hairpin-binding protein-like [Cricetulus
griseus]
Length = 187
Score = 54.7 bits (130), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 23/37 (62%), Positives = 27/37 (72%)
Query: 67 HPKTPPKELKYSRRAWDGLIKSWRSRLHFWDPPNENG 103
HP+TP K KYSRR+WD IK W+ LHFW+PP E G
Sbjct: 69 HPRTPNKFKKYSRRSWDQQIKLWKVALHFWNPPAEEG 105
>gi|66362980|ref|XP_628456.1| SLBP family of RNA binding proteins [Cryptosporidium parvum Iowa
II]
gi|46229808|gb|EAK90626.1| SLBP family of RNA binding proteins [Cryptosporidium parvum Iowa
II]
Length = 353
Score = 54.3 bits (129), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 38/65 (58%), Gaps = 5/65 (7%)
Query: 37 RRQKQIDFGKNTVGYDRYCSMVKREDRTKD-----HPKTPPKELKYSRRAWDGLIKSWRS 91
+R KQI+ KN+VGY RY + V++ +R ++ HP TP S+ + G +K W+
Sbjct: 27 QRLKQINIAKNSVGYQRYTTAVRKNERKRELSFTWHPSTPDPYSNTSKSCFSGRLKEWKL 86
Query: 92 RLHFW 96
RLH W
Sbjct: 87 RLHLW 91
>gi|440300297|gb|ELP92786.1| hypothetical protein EIN_372080 [Entamoeba invadens IP1]
Length = 224
Score = 53.9 bits (128), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 25/67 (37%), Positives = 38/67 (56%)
Query: 38 RQKQIDFGKNTVGYDRYCSMVKREDRTKDHPKTPPKELKYSRRAWDGLIKSWRSRLHFWD 97
R KQI FGK T Y Y +++ + R P+TP +K S+R WD +++ WR LH +D
Sbjct: 124 RDKQISFGKMTTEYVNYINIIPKNKRRITDPETPNVGMKASKRRWDQVVRRWRRALHAFD 183
Query: 98 PPNENGE 104
+E +
Sbjct: 184 DVHEENQ 190
>gi|209876376|ref|XP_002139630.1| hypothetical protein [Cryptosporidium muris RN66]
gi|209555236|gb|EEA05281.1| hypothetical protein CMU_022860 [Cryptosporidium muris RN66]
Length = 522
Score = 53.1 bits (126), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 36/124 (29%), Positives = 61/124 (49%), Gaps = 9/124 (7%)
Query: 37 RRQKQIDFGKNTVGYDRYCSMVKREDRTKD-----HPKTPPKELKYSRRAWDGLIKSWRS 91
+R KQI+ GKN+ GY+RY V+ + R + HP TP S+ + G ++ W+
Sbjct: 139 QRLKQIEIGKNSRGYERYSRAVRHDKRKRHLNSSWHPTTPDVYANISKSCFSGRLREWKL 198
Query: 92 RLHFWDPPNENGEPNSLLLDEDDDISSLDSQSVDSLPCTPIQEWKRRVRAKRESLSEDEE 151
RLH W +E + +L+++ ++ L + +D IQ + AK E+ S E
Sbjct: 199 RLHLWGNLSE--DEYKAILNDNMELPPLLNSHLDQ--NINIQNLSNKYFAKSENTSYSEL 254
Query: 152 EDCK 155
D +
Sbjct: 255 SDFQ 258
>gi|343473163|emb|CCD14877.1| unnamed protein product [Trypanosoma congolense IL3000]
Length = 409
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 25/58 (43%), Positives = 34/58 (58%), Gaps = 4/58 (6%)
Query: 44 FGKNTVGYDRYCSMV----KREDRTKDHPKTPPKELKYSRRAWDGLIKSWRSRLHFWD 97
+GK TVGY +Y S+V +RE + HP TP E S+R +D + WR +LH WD
Sbjct: 95 YGKETVGYTKYISVVPNRWEREFQNPMHPITPRPEFDCSKRTFDRYLNVWRRQLHLWD 152
>gi|340052649|emb|CCC46931.1| conserved hypothetical protein [Trypanosoma vivax Y486]
Length = 595
Score = 51.2 bits (121), Expect = 1e-04, Method: Composition-based stats.
Identities = 29/67 (43%), Positives = 35/67 (52%), Gaps = 5/67 (7%)
Query: 44 FGKNTVGYDRYCSMV----KREDRTKDHPKTPPKELKYSRRAWDGLIKSWRSRLHFWDPP 99
+GK T GY Y S V RE R HP TP E S+R +D + WR +LH WD
Sbjct: 267 YGKETTGYSNYVSAVPCRCDREFRNPMHPMTPRPEYDCSKRTFDRYLNIWRRQLHLWDDY 326
Query: 100 N-ENGEP 105
N +N EP
Sbjct: 327 NPKNLEP 333
>gi|342180199|emb|CCC89676.1| conserved hypothetical protein [Trypanosoma congolense IL3000]
Length = 583
Score = 50.8 bits (120), Expect = 2e-04, Method: Composition-based stats.
Identities = 25/58 (43%), Positives = 34/58 (58%), Gaps = 4/58 (6%)
Query: 44 FGKNTVGYDRYCSMV----KREDRTKDHPKTPPKELKYSRRAWDGLIKSWRSRLHFWD 97
+GK TVGY +Y S+V +RE + HP TP E S+R +D + WR +LH WD
Sbjct: 269 YGKETVGYTKYISVVPNRWEREFQNPMHPITPRPEFDCSKRTFDRYLNVWRRQLHLWD 326
>gi|66363044|ref|XP_628488.1| SLBP family of RNA binding proteins [Cryptosporidium parvum Iowa
II]
gi|46229508|gb|EAK90326.1| SLBP family of RNA binding proteins [Cryptosporidium parvum Iowa
II]
Length = 237
Score = 49.7 bits (117), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 25/80 (31%), Positives = 43/80 (53%)
Query: 35 LLRRQKQIDFGKNTVGYDRYCSMVKREDRTKDHPKTPPKELKYSRRAWDGLIKSWRSRLH 94
++ R KQI GK+ Y Y + V E R+ + P+TP + + ++R +D L + WR +LH
Sbjct: 142 MISRLKQIAIGKSLPEYKNYINQVPLEKRSSEDPRTPKCDTRLTKREFDNLYREWRVKLH 201
Query: 95 FWDPPNENGEPNSLLLDEDD 114
++ +G + EDD
Sbjct: 202 QYESKFSSGASTRVNTPEDD 221
>gi|67623947|ref|XP_668256.1| CG15040 gene product [Cryptosporidium hominis TU502]
gi|54659451|gb|EAL38027.1| CG15040 gene product [Cryptosporidium hominis]
Length = 236
Score = 49.7 bits (117), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 25/80 (31%), Positives = 43/80 (53%)
Query: 35 LLRRQKQIDFGKNTVGYDRYCSMVKREDRTKDHPKTPPKELKYSRRAWDGLIKSWRSRLH 94
++ R KQI GK+ Y Y + V E R+ + P+TP + + ++R +D L + WR +LH
Sbjct: 141 MISRLKQIAIGKSLPEYKNYINQVPLEKRSSEDPRTPKCDTRLTKREFDNLYREWRVKLH 200
Query: 95 FWDPPNENGEPNSLLLDEDD 114
++ +G + EDD
Sbjct: 201 QYESKFSSGASTRVNTPEDD 220
>gi|407846494|gb|EKG02597.1| hypothetical protein TCSYLVIO_006370 [Trypanosoma cruzi]
Length = 621
Score = 49.3 bits (116), Expect = 5e-04, Method: Composition-based stats.
Identities = 32/93 (34%), Positives = 45/93 (48%), Gaps = 9/93 (9%)
Query: 44 FGKNTVGYDRYCSMV----KREDRTKDHPKTPPKELKYSRRAWDGLIKSWRSRLHFWDPP 99
+GK T+GY Y V RE R HP TP E S+R +D + WR +LH WD
Sbjct: 277 YGKETLGYSNYLRAVPSRCDREFRNPMHPITPRPEYDCSKRTFDRYLNVWRRQLHLWDDY 336
Query: 100 NENG-EPNSLLLDEDDDISSLDSQSVDSLPCTP 131
+ N EP + + I +L + ++ P TP
Sbjct: 337 DPNNLEPQYVRI----GIPTLRALGLELPPSTP 365
>gi|71401297|ref|XP_803320.1| hypothetical protein [Trypanosoma cruzi strain CL Brener]
gi|70866216|gb|EAN81874.1| hypothetical protein, conserved [Trypanosoma cruzi]
Length = 624
Score = 49.3 bits (116), Expect = 5e-04, Method: Composition-based stats.
Identities = 32/93 (34%), Positives = 45/93 (48%), Gaps = 9/93 (9%)
Query: 44 FGKNTVGYDRYCSMV----KREDRTKDHPKTPPKELKYSRRAWDGLIKSWRSRLHFWDPP 99
+GK T+GY Y V RE R HP TP E S+R +D + WR +LH WD
Sbjct: 278 YGKETLGYSNYLRAVPSRCDREFRNPMHPITPRPEYDCSKRTFDRYLNVWRRQLHLWDDY 337
Query: 100 NENG-EPNSLLLDEDDDISSLDSQSVDSLPCTP 131
+ N EP + + I +L + ++ P TP
Sbjct: 338 DPNNLEPQYVRI----GIPTLRALGLELPPSTP 366
>gi|157870784|ref|XP_001683942.1| conserved hypothetical protein [Leishmania major strain Friedlin]
gi|68127009|emb|CAJ05444.1| conserved hypothetical protein [Leishmania major strain Friedlin]
Length = 996
Score = 49.3 bits (116), Expect = 6e-04, Method: Composition-based stats.
Identities = 26/62 (41%), Positives = 35/62 (56%), Gaps = 4/62 (6%)
Query: 40 KQIDFGKNTVGYDRYCSMV----KREDRTKDHPKTPPKELKYSRRAWDGLIKSWRSRLHF 95
KQI +GK T GY +Y SM+ RE H TP E S+R +D ++ +WR +LH
Sbjct: 494 KQIVYGKETEGYLKYTSMIPRPCDREYHNPLHAITPRPEYDCSKRQFDRVLNAWRRQLHQ 553
Query: 96 WD 97
WD
Sbjct: 554 WD 555
>gi|344244298|gb|EGW00402.1| Histone RNA hairpin-binding protein [Cricetulus griseus]
Length = 225
Score = 49.3 bits (116), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 20/33 (60%), Positives = 27/33 (81%)
Query: 29 ETDPAILLRRQKQIDFGKNTVGYDRYCSMVKRE 61
ETD ++L+RRQKQI++GKNT+ YDRY V R+
Sbjct: 129 ETDESVLMRRQKQINYGKNTIAYDRYIKEVPRQ 161
>gi|401423509|ref|XP_003876241.1| conserved hypothetical protein [Leishmania mexicana
MHOM/GT/2001/U1103]
gi|322492482|emb|CBZ27757.1| conserved hypothetical protein [Leishmania mexicana
MHOM/GT/2001/U1103]
Length = 1002
Score = 48.9 bits (115), Expect = 7e-04, Method: Composition-based stats.
Identities = 26/62 (41%), Positives = 35/62 (56%), Gaps = 4/62 (6%)
Query: 40 KQIDFGKNTVGYDRYCSMVKR----EDRTKDHPKTPPKELKYSRRAWDGLIKSWRSRLHF 95
KQI +GK T GY +Y SM+ R E H TP E S+R +D ++ +WR +LH
Sbjct: 499 KQIIYGKETEGYLKYTSMISRPCDREYHNPLHAITPRPEYDCSKRQFDRVLNAWRRQLHQ 558
Query: 96 WD 97
WD
Sbjct: 559 WD 560
>gi|398016666|ref|XP_003861521.1| hypothetical protein, conserved [Leishmania donovani]
gi|322499747|emb|CBZ34821.1| hypothetical protein, conserved [Leishmania donovani]
Length = 998
Score = 48.9 bits (115), Expect = 8e-04, Method: Composition-based stats.
Identities = 27/62 (43%), Positives = 37/62 (59%), Gaps = 4/62 (6%)
Query: 40 KQIDFGKNTVGYDRYCSMVKRE-DRTKDHPK---TPPKELKYSRRAWDGLIKSWRSRLHF 95
KQI +GK T GY +Y SM+ R DR +P TP E S+R +D ++ +WR +LH
Sbjct: 496 KQIVYGKETEGYLKYTSMISRPCDREYHNPLHAITPRPEYDCSKRQFDRVLNAWRRQLHQ 555
Query: 96 WD 97
WD
Sbjct: 556 WD 557
>gi|146089061|ref|XP_001466222.1| conserved hypothetical protein [Leishmania infantum JPCM5]
gi|134070324|emb|CAM68661.1| conserved hypothetical protein [Leishmania infantum JPCM5]
Length = 998
Score = 48.5 bits (114), Expect = 8e-04, Method: Composition-based stats.
Identities = 26/62 (41%), Positives = 35/62 (56%), Gaps = 4/62 (6%)
Query: 40 KQIDFGKNTVGYDRYCSMVKR----EDRTKDHPKTPPKELKYSRRAWDGLIKSWRSRLHF 95
KQI +GK T GY +Y SM+ R E H TP E S+R +D ++ +WR +LH
Sbjct: 496 KQIVYGKETEGYLKYTSMISRPCDREYHNPLHAITPRPEYDCSKRQFDRVLNAWRRQLHQ 555
Query: 96 WD 97
WD
Sbjct: 556 WD 557
>gi|72386721|ref|XP_843785.1| hypothetical protein [Trypanosoma brucei brucei strain 927/4
GUTat10.1]
gi|62359790|gb|AAX80219.1| hypothetical protein, conserved [Trypanosoma brucei]
gi|70800317|gb|AAZ10226.1| hypothetical protein, conserved [Trypanosoma brucei brucei strain
927/4 GUTat10.1]
Length = 591
Score = 48.5 bits (114), Expect = 8e-04, Method: Composition-based stats.
Identities = 24/58 (41%), Positives = 30/58 (51%), Gaps = 4/58 (6%)
Query: 44 FGKNTVGYDRYCSMV----KREDRTKDHPKTPPKELKYSRRAWDGLIKSWRSRLHFWD 97
+GK T GY+ Y V RE R HP TP E S+R +D + WR +LH WD
Sbjct: 269 YGKETAGYENYIRAVPSRCDREFRNPMHPMTPRPEYDCSKRTFDRYLNVWRRQLHLWD 326
>gi|261326870|emb|CBH09843.1| hypothetical protein, conserved [Trypanosoma brucei gambiense
DAL972]
Length = 591
Score = 48.5 bits (114), Expect = 9e-04, Method: Composition-based stats.
Identities = 24/58 (41%), Positives = 30/58 (51%), Gaps = 4/58 (6%)
Query: 44 FGKNTVGYDRYCSMV----KREDRTKDHPKTPPKELKYSRRAWDGLIKSWRSRLHFWD 97
+GK T GY+ Y V RE R HP TP E S+R +D + WR +LH WD
Sbjct: 269 YGKETAGYENYIRAVPSRCDREFRNPMHPMTPRPEYDCSKRTFDRYLNVWRRQLHLWD 326
>gi|71398374|ref|XP_802584.1| hypothetical protein [Trypanosoma cruzi strain CL Brener]
gi|70864029|gb|EAN81138.1| hypothetical protein, conserved [Trypanosoma cruzi]
Length = 388
Score = 48.5 bits (114), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 34/94 (36%), Positives = 46/94 (48%), Gaps = 11/94 (11%)
Query: 44 FGKNTVGYDRYCSMVK----REDRTKDHPKTPPKELKYSRRAWDGLIKSWRSRLHFWD-- 97
+GK T+GY Y V RE R HP TP E S+R +D + WR +LH WD
Sbjct: 277 YGKETLGYSNYLRAVPSRCDREFRNPMHPITPRPEYDCSKRTFDRYLNVWRRQLHLWDDY 336
Query: 98 PPNENGEPNSLLLDEDDDISSLDSQSVDSLPCTP 131
PN N EP + + I +L + ++ P TP
Sbjct: 337 DPN-NLEPQYVRI----GIPTLRALGLELPPSTP 365
>gi|159474502|ref|XP_001695364.1| predicted protein [Chlamydomonas reinhardtii]
gi|158275847|gb|EDP01622.1| predicted protein [Chlamydomonas reinhardtii]
Length = 128
Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 22/38 (57%), Positives = 26/38 (68%)
Query: 23 GKKLAYETDPAILLRRQKQIDFGKNTVGYDRYCSMVKR 60
K+ + DP L +RQKQIDFGKNTVGY RY +V R
Sbjct: 90 AKQPILDLDPHRLAQRQKQIDFGKNTVGYQRYLQLVPR 127
>gi|156095464|ref|XP_001613767.1| hypothetical protein [Plasmodium vivax Sal-1]
gi|148802641|gb|EDL44040.1| hypothetical protein, conserved [Plasmodium vivax]
Length = 324
Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/76 (34%), Positives = 39/76 (51%), Gaps = 5/76 (6%)
Query: 26 LAYETDPAILLRRQKQIDFGKNTVGYDRYCSMVKREDRTKD-----HPKTPPKELKYSRR 80
L E A + +R K I+ K + Y+RY + V +E+R KD HP+TP S
Sbjct: 15 LKNELSQAQINQRIKNINLTKRLISYERYITAVPKEERRKDMKNDWHPETPRINRNLSLS 74
Query: 81 AWDGLIKSWRSRLHFW 96
W+ +K WR ++H W
Sbjct: 75 QWNKEMKKWRKQVHAW 90
>gi|72386517|ref|XP_843683.1| hypothetical protein [Trypanosoma brucei brucei strain 927/4
GUTat10.1]
gi|62175769|gb|AAX69897.1| hypothetical protein, conserved [Trypanosoma brucei]
gi|70800215|gb|AAZ10124.1| hypothetical protein, conserved [Trypanosoma brucei brucei strain
927/4 GUTat10.1]
Length = 432
Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 24/66 (36%), Positives = 36/66 (54%), Gaps = 3/66 (4%)
Query: 35 LLRRQKQIDFGKNTVGYDRYCSMVKREDRTKDH---PKTPPKELKYSRRAWDGLIKSWRS 91
L +R+KQ+ FG T GY+ +V+ + K P +PP K S+R WD ++ WR
Sbjct: 47 LHQREKQLSFGYATEGYNNMIKLVEHDPLLKSGGIIPLSPPDVNKGSKRVWDVSLRKWRR 106
Query: 92 RLHFWD 97
LH +D
Sbjct: 107 ALHMFD 112
>gi|261326739|emb|CBH09712.1| hypothetical protein, conserved [Trypanosoma brucei gambiense
DAL972]
Length = 432
Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 24/66 (36%), Positives = 36/66 (54%), Gaps = 3/66 (4%)
Query: 35 LLRRQKQIDFGKNTVGYDRYCSMVKREDRTKDH---PKTPPKELKYSRRAWDGLIKSWRS 91
L +R+KQ+ FG T GY+ +V+ + K P +PP K S+R WD ++ WR
Sbjct: 47 LHQREKQLSFGYATEGYNNMIKLVEHDPLLKSGGIIPLSPPDVNKGSKRVWDVSLRKWRR 106
Query: 92 RLHFWD 97
LH +D
Sbjct: 107 ALHMFD 112
>gi|389584145|dbj|GAB66878.1| hypothetical protein PCYB_102280 [Plasmodium cynomolgi strain B]
Length = 305
Score = 47.0 bits (110), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/76 (32%), Positives = 39/76 (51%), Gaps = 5/76 (6%)
Query: 26 LAYETDPAILLRRQKQIDFGKNTVGYDRYCSMVKREDRTKD-----HPKTPPKELKYSRR 80
L E A + +R K I+ K + Y+RY + + +E+R KD HP+TP S
Sbjct: 22 LKNELSQAQINQRIKNINLTKRLISYERYINAIPKEERRKDMKNDWHPETPRINRNLSLS 81
Query: 81 AWDGLIKSWRSRLHFW 96
W+ +K WR ++H W
Sbjct: 82 QWNKEMKKWRKQVHAW 97
>gi|154338842|ref|XP_001565643.1| conserved hypothetical protein [Leishmania braziliensis
MHOM/BR/75/M2904]
gi|134062695|emb|CAM39138.1| conserved hypothetical protein [Leishmania braziliensis
MHOM/BR/75/M2904]
Length = 950
Score = 47.0 bits (110), Expect = 0.002, Method: Composition-based stats.
Identities = 25/62 (40%), Positives = 35/62 (56%), Gaps = 4/62 (6%)
Query: 40 KQIDFGKNTVGYDRYCSMVKR----EDRTKDHPKTPPKELKYSRRAWDGLIKSWRSRLHF 95
KQI +GK T GY +Y S++ R E H TP E S+R +D ++ +WR +LH
Sbjct: 483 KQIIYGKETEGYLKYTSLISRPCDREYHNPLHAITPRPEYDCSKRQFDRVLNAWRRQLHQ 542
Query: 96 WD 97
WD
Sbjct: 543 WD 544
>gi|407851503|gb|EKG05397.1| hypothetical protein TCSYLVIO_003535 [Trypanosoma cruzi]
Length = 441
Score = 46.6 bits (109), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 38/120 (31%), Positives = 57/120 (47%), Gaps = 16/120 (13%)
Query: 37 RRQKQIDFGKNTVGYDRYCSMVKREDRTKDH---PKTPPKELKYSRRAWDGLIKSWRSRL 93
+R+KQI +G T GY +V+ + K P +PP K S+R WD ++ WR L
Sbjct: 55 QREKQISYGFVTEGYRNMVKLVESDPLLKSGGILPLSPPDLNKGSKRTWDVSLRKWRRAL 114
Query: 94 HFWDPPNENGEPNSLLLDEDDDISSLDS----QSVDSLPCTPIQEWK-RRVRAKRESLSE 148
H +D N + +ED ++L+S Q + + QE K RRVR E + E
Sbjct: 115 HMFD--------NVFIENEDASPTTLESVIENQRLQWVSPLFTQEPKERRVRLSAEKIKE 166
>gi|407407151|gb|EKF31095.1| hypothetical protein MOQ_005074 [Trypanosoma cruzi marinkellei]
Length = 628
Score = 46.6 bits (109), Expect = 0.003, Method: Composition-based stats.
Identities = 31/93 (33%), Positives = 44/93 (47%), Gaps = 9/93 (9%)
Query: 44 FGKNTVGYDRYCSMV----KREDRTKDHPKTPPKELKYSRRAWDGLIKSWRSRLHFWDPP 99
+GK T+GY Y V RE HP TP E S+R +D + WR +LH WD
Sbjct: 278 YGKETLGYSNYLRAVPSRCDREFHNPMHPITPRPEYDCSKRTFDRYLNVWRRQLHLWDDY 337
Query: 100 NENG-EPNSLLLDEDDDISSLDSQSVDSLPCTP 131
+ N EP + + I +L + ++ P TP
Sbjct: 338 DPNNLEPQYVRI----GIPTLRALGLELPPSTP 366
>gi|407414016|gb|EKF35684.1| hypothetical protein MOQ_002321 [Trypanosoma cruzi marinkellei]
Length = 441
Score = 46.2 bits (108), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 27/88 (30%), Positives = 44/88 (50%), Gaps = 11/88 (12%)
Query: 37 RRQKQIDFGKNTVGYDRYCSMVKREDRTKDH---PKTPPKELKYSRRAWDGLIKSWRSRL 93
+R+KQ+ +G T GY +V+ + K P +PP K S+R WD ++ WR L
Sbjct: 55 QREKQVSYGFATEGYRNMVKLVESDPLLKSGGILPLSPPDLSKGSKRTWDVSLRKWRRAL 114
Query: 94 HFWDPPNENGEPNSLLLDEDDDISSLDS 121
H +D N + +ED ++L+S
Sbjct: 115 HMFD--------NVFIENEDASQTTLES 134
>gi|340052553|emb|CCC46834.1| conserved hypothetical protein [Trypanosoma vivax Y486]
Length = 428
Score = 45.8 bits (107), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 34/125 (27%), Positives = 54/125 (43%), Gaps = 18/125 (14%)
Query: 6 RHNTNANKKSGPGTPGSGKKLAYETDPAI-----LLRRQKQIDFGKNTVGYDRYCSMVKR 60
RH +N P G+ P+ L +R+KQI FG T GY ++K
Sbjct: 13 RHGSNRETNRYPSKSNDGRSANKLCAPSPDDERRLSQREKQISFGYATEGYRNMMRLIKH 72
Query: 61 EDRTKDH---PKTPPKELKYSRRAWDGLIKSWRSRLHFWDPPNENGEPNSLLLD-EDDDI 116
+ P +PP S+R+WD ++ WR LH +D + +D EDD +
Sbjct: 73 DPLLMSGGIIPLSPPDITDGSKRSWDISLRKWRRALHMFD---------CVFIDGEDDSV 123
Query: 117 SSLDS 121
+L++
Sbjct: 124 KTLEN 128
>gi|343476599|emb|CCD12344.1| unnamed protein product [Trypanosoma congolense IL3000]
Length = 431
Score = 45.8 bits (107), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 26/74 (35%), Positives = 38/74 (51%), Gaps = 3/74 (4%)
Query: 36 LRRQKQIDFGKNTVGYDRYCSMVKREDRTKDH---PKTPPKELKYSRRAWDGLIKSWRSR 92
L+R+KQ+ FG T GY +V+ + + P PP K S+R WD ++ WR
Sbjct: 48 LQREKQLSFGYATDGYRNMVKLVEHDPLLRSGGVIPLLPPDIDKGSKRLWDVSLRKWRRA 107
Query: 93 LHFWDPPNENGEPN 106
LH +D +GE N
Sbjct: 108 LHMFDCVFIDGESN 121
>gi|71652619|ref|XP_814962.1| hypothetical protein [Trypanosoma cruzi strain CL Brener]
gi|70879981|gb|EAN93111.1| hypothetical protein, conserved [Trypanosoma cruzi]
Length = 441
Score = 45.4 bits (106), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 38/120 (31%), Positives = 56/120 (46%), Gaps = 16/120 (13%)
Query: 37 RRQKQIDFGKNTVGYDRYCSMVKREDRTKDH---PKTPPKELKYSRRAWDGLIKSWRSRL 93
+R+KQI +G T GY +V+ + K P +PP K S+R WD ++ WR L
Sbjct: 55 QREKQISYGFVTEGYRNMVKLVESDPLLKSGGILPLSPPDINKGSKRTWDVSLRKWRRAL 114
Query: 94 HFWDPPNENGEPNSLLLDEDDDISSLDS----QSVDSLPCTPIQEWK-RRVRAKRESLSE 148
H +D N + +ED +L+S Q + + QE K RRVR E + E
Sbjct: 115 HMFD--------NVFIENEDASPITLESVIENQRLQWVSPLFTQEPKERRVRLSAEKIKE 166
>gi|84995880|ref|XP_952662.1| hypothetical protein [Theileria annulata strain Ankara]
gi|65302823|emb|CAI74930.1| hypothetical protein, conserved [Theileria annulata]
Length = 380
Score = 45.4 bits (106), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 30/89 (33%), Positives = 42/89 (47%), Gaps = 10/89 (11%)
Query: 9 TNANKKSGPGTPGSGKKLAYETDPAILLRRQKQIDFGKNTVGYDRYCSMVKREDRTKDHP 68
T NKKS P + D R K I GK T GY Y MV +++R D P
Sbjct: 298 TELNKKSKP---------SLNDDNTRFYSRLKDIAIGKATKGYQNYIRMVPKDERGPDDP 348
Query: 69 KTPPKELKYSRRAWDGLIKSWRSRLHFWD 97
+TP + S + + +SWR++LH +D
Sbjct: 349 QTPNTK-NVSASKFRAMYRSWRTQLHKFD 376
>gi|399219031|emb|CCF75918.1| unnamed protein product [Babesia microti strain RI]
Length = 201
Score = 45.4 bits (106), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 31/100 (31%), Positives = 48/100 (48%), Gaps = 7/100 (7%)
Query: 3 RATRHNTNANKKSGPGTPGSGKKL---AYETDPAILLRRQ--KQIDFGKNTVGYDRYCSM 57
R +NT NK SG T KK+ A + P++ + RQ K I K GY+ Y +
Sbjct: 13 RHQHNNTTPNKNSGNET--FVKKIVRQASKQSPSVNIIRQRLKSISLTKLQKGYENYINK 70
Query: 58 VKREDRTKDHPKTPPKELKYSRRAWDGLIKSWRSRLHFWD 97
V + R D P TP ++ S W ++ WR ++H ++
Sbjct: 71 VPIDSRKSDDPVTPRVDINLSNSQWRNVLSEWRKKIHTYN 110
>gi|82540261|ref|XP_724463.1| hypothetical protein [Plasmodium yoelii yoelii 17XNL]
gi|23479108|gb|EAA16028.1| Drosophila melanogaster CG15040 gene product [Plasmodium yoelii
yoelii]
Length = 540
Score = 45.1 bits (105), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 23/63 (36%), Positives = 30/63 (47%)
Query: 38 RQKQIDFGKNTVGYDRYCSMVKREDRTKDHPKTPPKELKYSRRAWDGLIKSWRSRLHFWD 97
R K+I GK+T Y Y +VK EDR D P TP + + WR +LH +D
Sbjct: 478 RLKEIAVGKSTKEYKNYVKLVKYEDRMDDDPATPNAYENITNAKFQAKYNLWRKKLHKFD 537
Query: 98 PPN 100
N
Sbjct: 538 TIN 540
>gi|237835603|ref|XP_002367099.1| hypothetical protein TGME49_047320 [Toxoplasma gondii ME49]
gi|211964763|gb|EEA99958.1| hypothetical protein TGME49_047320 [Toxoplasma gondii ME49]
gi|221506227|gb|EEE31862.1| conserved hypothetical protein [Toxoplasma gondii VEG]
Length = 470
Score = 45.1 bits (105), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 36/128 (28%), Positives = 53/128 (41%), Gaps = 7/128 (5%)
Query: 5 TRHNTNANKKSGPGTPGSGKKLAYETDPAILLRRQKQIDFGKNTVGYDRYCSMVKREDR- 63
TR ++A + SGP K P + +R I K + GY RY V RE R
Sbjct: 242 TRSQSSAKESSGPQHFQRSKDKVL--TPLQISKRDADILHTKRSEGYQRYVRAVPREKRS 299
Query: 64 ----TKDHPKTPPKELKYSRRAWDGLIKSWRSRLHFWDPPNENGEPNSLLLDEDDDISSL 119
T HP TP S + W L+ WR ++H W E+ + + +D + +L
Sbjct: 300 PLCRTTWHPVTPRSAQNLSVKQWRDLLSKWRHQVHLWTNLPEHVYSSISGMAVEDQMKTL 359
Query: 120 DSQSVDSL 127
S + L
Sbjct: 360 GSMTAREL 367
>gi|209876448|ref|XP_002139666.1| hypothetical protein [Cryptosporidium muris RN66]
gi|209555272|gb|EEA05317.1| hypothetical protein, conserved [Cryptosporidium muris RN66]
Length = 251
Score = 44.7 bits (104), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 23/59 (38%), Positives = 32/59 (54%)
Query: 36 LRRQKQIDFGKNTVGYDRYCSMVKREDRTKDHPKTPPKELKYSRRAWDGLIKSWRSRLH 94
+ R KQI GK+ Y Y + V E R + P TP + K SRR +D + + WR +LH
Sbjct: 166 ISRLKQIAIGKSLPEYKNYIAAVPIEKRPPNAPHTPKHDNKVSRREFDRMYREWRIKLH 224
>gi|401423319|ref|XP_003876146.1| conserved hypothetical protein [Leishmania mexicana
MHOM/GT/2001/U1103]
gi|322492387|emb|CBZ27661.1| conserved hypothetical protein [Leishmania mexicana
MHOM/GT/2001/U1103]
Length = 873
Score = 44.3 bits (103), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 22/64 (34%), Positives = 34/64 (53%), Gaps = 3/64 (4%)
Query: 37 RRQKQIDFGKNTVGYDRYCSMVKREDRTKDH---PKTPPKELKYSRRAWDGLIKSWRSRL 93
+R+KQI FG T GY ++ + + P +PP +K S+R WD ++ WR L
Sbjct: 168 QREKQIQFGYVTDGYTNMKRLIAHDPLLRSGGILPLSPPDVVKGSKRLWDIQLRKWRRAL 227
Query: 94 HFWD 97
H +D
Sbjct: 228 HMFD 231
>gi|398016474|ref|XP_003861425.1| hypothetical protein, conserved [Leishmania donovani]
gi|322499651|emb|CBZ34725.1| hypothetical protein, conserved [Leishmania donovani]
Length = 851
Score = 44.3 bits (103), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 22/64 (34%), Positives = 33/64 (51%), Gaps = 3/64 (4%)
Query: 37 RRQKQIDFGKNTVGYDRYCSMVKREDRTKDH---PKTPPKELKYSRRAWDGLIKSWRSRL 93
+R+KQI FG T GY ++ + + P +PP K S+R WD ++ WR L
Sbjct: 168 QREKQIQFGYVTDGYTNMKRLIAHDPLLRSGGILPLSPPDVFKGSKRLWDIQLRKWRRAL 227
Query: 94 HFWD 97
H +D
Sbjct: 228 HMFD 231
>gi|68075437|ref|XP_679637.1| hypothetical protein [Plasmodium berghei strain ANKA]
gi|56500435|emb|CAI04796.1| conserved hypothetical protein [Plasmodium berghei]
Length = 199
Score = 44.3 bits (103), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 23/63 (36%), Positives = 30/63 (47%)
Query: 38 RQKQIDFGKNTVGYDRYCSMVKREDRTKDHPKTPPKELKYSRRAWDGLIKSWRSRLHFWD 97
R K+I GK+T Y Y +VK EDR D P TP + + WR +LH +D
Sbjct: 137 RLKEIAVGKSTKEYKNYVKLVKYEDRMDDDPATPNAYENITNAKFQAKYNLWRKKLHKFD 196
Query: 98 PPN 100
N
Sbjct: 197 TIN 199
>gi|157870592|ref|XP_001683846.1| conserved hypothetical protein [Leishmania major strain Friedlin]
gi|68126913|emb|CAJ05028.1| conserved hypothetical protein [Leishmania major strain Friedlin]
Length = 871
Score = 44.3 bits (103), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 22/64 (34%), Positives = 34/64 (53%), Gaps = 3/64 (4%)
Query: 37 RRQKQIDFGKNTVGYDRYCSMVKREDRTKDH---PKTPPKELKYSRRAWDGLIKSWRSRL 93
+R+KQI FG T GY ++ + + P +PP +K S+R WD ++ WR L
Sbjct: 168 QREKQIQFGYVTDGYTNMKRLIAHDPLLRSGGILPLSPPDVVKGSKRLWDIQLRKWRRAL 227
Query: 94 HFWD 97
H +D
Sbjct: 228 HMFD 231
>gi|146088703|ref|XP_001466124.1| conserved hypothetical protein [Leishmania infantum JPCM5]
gi|134070226|emb|CAM68563.1| conserved hypothetical protein [Leishmania infantum JPCM5]
Length = 852
Score = 44.3 bits (103), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 22/64 (34%), Positives = 33/64 (51%), Gaps = 3/64 (4%)
Query: 37 RRQKQIDFGKNTVGYDRYCSMVKREDRTKDH---PKTPPKELKYSRRAWDGLIKSWRSRL 93
+R+KQI FG T GY ++ + + P +PP K S+R WD ++ WR L
Sbjct: 168 QREKQIQFGYVTDGYTNMKRLIAHDPLLRSGGILPLSPPDVFKGSKRLWDIQLRKWRRAL 227
Query: 94 HFWD 97
H +D
Sbjct: 228 HMFD 231
>gi|221056977|ref|XP_002259626.1| hypothetical protein, conserved in Plasmodium species [Plasmodium
knowlesi strain H]
gi|193809698|emb|CAQ40400.1| hypothetical protein, conserved in Plasmodium species [Plasmodium
knowlesi strain H]
Length = 363
Score = 44.3 bits (103), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 22/69 (31%), Positives = 37/69 (53%), Gaps = 5/69 (7%)
Query: 33 AILLRRQKQIDFGKNTVGYDRYCSMVKREDRTKD-----HPKTPPKELKYSRRAWDGLIK 87
A + +R K I K + Y+RY + + +E+R +D HP+TP + S W+ +K
Sbjct: 40 AQMNQRIKNISLTKRLISYERYINAIPKEERREDMKNDWHPETPRIKKNVSLSQWNKEMK 99
Query: 88 SWRSRLHFW 96
WR ++H W
Sbjct: 100 KWRKQVHAW 108
>gi|221055417|ref|XP_002258847.1| hypothetical protein, conserved in Plasmodium species [Plasmodium
knowlesi strain H]
gi|193808917|emb|CAQ39620.1| hypothetical protein, conserved in Plasmodium species [Plasmodium
knowlesi strain H]
Length = 285
Score = 44.3 bits (103), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 22/69 (31%), Positives = 37/69 (53%), Gaps = 5/69 (7%)
Query: 33 AILLRRQKQIDFGKNTVGYDRYCSMVKREDRTKD-----HPKTPPKELKYSRRAWDGLIK 87
A + +R K I K + Y+RY + + +E+R +D HP+TP + S W+ +K
Sbjct: 22 AQMNQRIKNISLTKRLISYERYINAIPKEERREDMKNDWHPETPRIKKNVSLSQWNREMK 81
Query: 88 SWRSRLHFW 96
WR ++H W
Sbjct: 82 KWRKQIHAW 90
>gi|70936141|ref|XP_739058.1| hypothetical protein [Plasmodium chabaudi chabaudi]
gi|56515762|emb|CAH79963.1| conserved hypothetical protein [Plasmodium chabaudi chabaudi]
Length = 135
Score = 44.3 bits (103), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 23/63 (36%), Positives = 30/63 (47%)
Query: 38 RQKQIDFGKNTVGYDRYCSMVKREDRTKDHPKTPPKELKYSRRAWDGLIKSWRSRLHFWD 97
R K+I GK+T Y Y +VK EDR D P TP + + WR +LH +D
Sbjct: 73 RLKEIAVGKSTKEYKNYVKLVKYEDRMDDDPATPNAYENITNAKFQAKYNLWRKKLHKFD 132
Query: 98 PPN 100
N
Sbjct: 133 TTN 135
>gi|297787491|pdb|2KJM|A Chain A, Solution Structure Of Slbp Rna Binding Domain Fragment
Length = 30
Score = 44.3 bits (103), Expect = 0.019, Method: Composition-based stats.
Identities = 19/30 (63%), Positives = 25/30 (83%)
Query: 29 ETDPAILLRRQKQIDFGKNTVGYDRYCSMV 58
ETD ++L+RRQKQI++GKNT+ YDRY V
Sbjct: 1 ETDESVLMRRQKQINYGKNTIAYDRYIKEV 30
>gi|221056694|ref|XP_002259485.1| hypothetical protein, conserved in Plasmodium species [Plasmodium
knowlesi strain H]
gi|193809556|emb|CAQ40258.1| hypothetical protein, conserved in Plasmodium species [Plasmodium
knowlesi strain H]
Length = 314
Score = 43.9 bits (102), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 22/69 (31%), Positives = 37/69 (53%), Gaps = 5/69 (7%)
Query: 33 AILLRRQKQIDFGKNTVGYDRYCSMVKREDRTKD-----HPKTPPKELKYSRRAWDGLIK 87
A + +R K I K + Y+RY + + +E+R +D HP+TP + S W+ +K
Sbjct: 22 AQMNQRIKNISLTKRLISYERYINAIPKEERREDMKNDWHPETPRIKKNVSLSQWNREMK 81
Query: 88 SWRSRLHFW 96
WR ++H W
Sbjct: 82 KWRKQIHAW 90
>gi|221485365|gb|EEE23646.1| conserved hypothetical protein [Toxoplasma gondii GT1]
Length = 477
Score = 43.9 bits (102), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 31/97 (31%), Positives = 41/97 (42%), Gaps = 7/97 (7%)
Query: 5 TRHNTNANKKSGPGTPGSGKKLAYETDPAILLRRQKQIDFGKNTVGYDRYCSMVKREDR- 63
TR ++A + SGP K P + +R I K + GY RY V RE R
Sbjct: 242 TRSQSSAKESSGPQHFQRSKDKVL--TPLQISKRDADILHTKRSEGYQRYVRAVPREKRS 299
Query: 64 ----TKDHPKTPPKELKYSRRAWDGLIKSWRSRLHFW 96
T HP TP S + W L+ WR ++H W
Sbjct: 300 PLCRTTWHPVTPRSAQNLSVKQWRDLLSKWRHQVHLW 336
>gi|401413072|ref|XP_003885983.1| conserved hypothetical protein [Neospora caninum Liverpool]
gi|325120403|emb|CBZ55957.1| conserved hypothetical protein [Neospora caninum Liverpool]
Length = 448
Score = 43.9 bits (102), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 28/101 (27%), Positives = 42/101 (41%), Gaps = 5/101 (4%)
Query: 32 PAILLRRQKQIDFGKNTVGYDRYCSMVKREDRTKD-----HPKTPPKELKYSRRAWDGLI 86
P + +R I K + GY RY V RE R+ HP TP S + W L+
Sbjct: 270 PLQISKRDADILHTKRSEGYQRYVRAVPREKRSPSCRSTWHPVTPCSSQNLSVKQWRDLL 329
Query: 87 KSWRSRLHFWDPPNENGEPNSLLLDEDDDISSLDSQSVDSL 127
WR ++H W E+ + +D + +L S + L
Sbjct: 330 SKWRHQVHLWTNLPESVYSRISGMSVEDQVKALGSMTAREL 370
>gi|294876761|ref|XP_002767789.1| hypothetical protein Pmar_PMAR018391 [Perkinsus marinus ATCC
50983]
gi|294882547|ref|XP_002769736.1| hypothetical protein Pmar_PMAR021912 [Perkinsus marinus ATCC
50983]
gi|239869634|gb|EER00507.1| hypothetical protein Pmar_PMAR018391 [Perkinsus marinus ATCC
50983]
gi|239873477|gb|EER02454.1| hypothetical protein Pmar_PMAR021912 [Perkinsus marinus ATCC
50983]
Length = 63
Score = 43.9 bits (102), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 25/54 (46%), Positives = 33/54 (61%), Gaps = 3/54 (5%)
Query: 34 ILLRRQKQIDFGKNTVGYDRYCSMVKREDRT-KD--HPKTPPKELKYSRRAWDG 84
IL +RQKQID K + GY Y V++ DR KD HP TP + S+RA++G
Sbjct: 10 ILAQRQKQIDLAKTSRGYQNYSKHVRKSDRNLKDPLHPSTPRVDGTDSKRAFEG 63
>gi|221054824|ref|XP_002258551.1| hypothetical protein, conserved in Plasmodium species [Plasmodium
knowlesi strain H]
gi|193808620|emb|CAQ39323.1| hypothetical protein, conserved in Plasmodium species [Plasmodium
knowlesi strain H]
Length = 553
Score = 43.5 bits (101), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 22/60 (36%), Positives = 29/60 (48%)
Query: 38 RQKQIDFGKNTVGYDRYCSMVKREDRTKDHPKTPPKELKYSRRAWDGLIKSWRSRLHFWD 97
R K+I GK+T Y Y MVK E+R D P TP + + WR +LH +D
Sbjct: 491 RLKEIAVGKSTKEYKNYVKMVKYEERMDDDPTTPNAYENVTNAKFQAKYNLWRKKLHKFD 550
>gi|156089627|ref|XP_001612220.1| hypothetical protein [Babesia bovis T2Bo]
gi|154799474|gb|EDO08652.1| hypothetical protein BBOV_III011000 [Babesia bovis]
Length = 360
Score = 43.1 bits (100), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 21/63 (33%), Positives = 31/63 (49%)
Query: 35 LLRRQKQIDFGKNTVGYDRYCSMVKREDRTKDHPKTPPKELKYSRRAWDGLIKSWRSRLH 94
+ R K I GK+T GY Y V + RT + P+TP S + + + WR+ LH
Sbjct: 296 ICSRLKDIAIGKSTKGYQNYIRKVPIDQRTSEDPQTPNLRENVSAARFQVIYRKWRTALH 355
Query: 95 FWD 97
+D
Sbjct: 356 MYD 358
>gi|124507099|ref|XP_001352146.1| conserved Plasmodium protein, unknown function [Plasmodium
falciparum 3D7]
gi|23505176|emb|CAD51957.1| conserved Plasmodium protein, unknown function [Plasmodium
falciparum 3D7]
Length = 595
Score = 43.1 bits (100), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 22/63 (34%), Positives = 31/63 (49%)
Query: 38 RQKQIDFGKNTVGYDRYCSMVKREDRTKDHPKTPPKELKYSRRAWDGLIKSWRSRLHFWD 97
R K+I GK+T Y Y +VK +DR +D P TP + + WR +LH +D
Sbjct: 533 RLKEIAVGKSTKEYKNYVKLVKYQDRLEDDPATPNAYEDITNAKFQAKYNLWRKKLHKFD 592
Query: 98 PPN 100
N
Sbjct: 593 TLN 595
>gi|389583114|dbj|GAB65850.1| hypothetical protein PCYB_073520 [Plasmodium cynomolgi strain B]
Length = 608
Score = 42.4 bits (98), Expect = 0.057, Method: Compositional matrix adjust.
Identities = 21/60 (35%), Positives = 30/60 (50%)
Query: 38 RQKQIDFGKNTVGYDRYCSMVKREDRTKDHPKTPPKELKYSRRAWDGLIKSWRSRLHFWD 97
R K+I GK+T Y Y +VK E+R +D P TP + + WR +LH +D
Sbjct: 546 RLKEIAVGKSTKEYKNYVKVVKYEERMEDDPSTPNAYENVTNAKFQAKYNLWRKKLHKFD 605
>gi|294953705|ref|XP_002787897.1| conserved hypothetical protein [Perkinsus marinus ATCC 50983]
gi|239902921|gb|EER19693.1| conserved hypothetical protein [Perkinsus marinus ATCC 50983]
Length = 329
Score = 42.0 bits (97), Expect = 0.082, Method: Compositional matrix adjust.
Identities = 25/68 (36%), Positives = 35/68 (51%), Gaps = 1/68 (1%)
Query: 37 RRQKQIDFGKNTVGYDRYCSMVKREDRTKD-HPKTPPKELKYSRRAWDGLIKSWRSRLHF 95
+R KQI+ GK T Y Y + V R P TP + S+RA+D +K WR +LH
Sbjct: 255 QRAKQIEIGKMTENYLAYRAAVTPTRRNPGVDPITPNPNERVSKRAFDAELKQWRKKLHS 314
Query: 96 WDPPNENG 103
+ P+ G
Sbjct: 315 IEVPSVKG 322
>gi|429327152|gb|AFZ78912.1| hypothetical protein BEWA_017530 [Babesia equi]
Length = 324
Score = 41.6 bits (96), Expect = 0.097, Method: Compositional matrix adjust.
Identities = 24/74 (32%), Positives = 34/74 (45%)
Query: 24 KKLAYETDPAILLRRQKQIDFGKNTVGYDRYCSMVKREDRTKDHPKTPPKELKYSRRAWD 83
K A E + R K I GK T GY Y V +R D P+TP + S +
Sbjct: 248 KNKAIEDTNTRIYSRLKDIAIGKATKGYQNYIKKVPIAERGPDDPQTPNSKENISASRFR 307
Query: 84 GLIKSWRSRLHFWD 97
+ ++WR+ LH +D
Sbjct: 308 AIYRAWRTHLHKYD 321
>gi|156097560|ref|XP_001614813.1| hypothetical protein [Plasmodium vivax Sal-1]
gi|148803687|gb|EDL45086.1| hypothetical protein, conserved [Plasmodium vivax]
Length = 589
Score = 41.6 bits (96), Expect = 0.097, Method: Compositional matrix adjust.
Identities = 21/60 (35%), Positives = 29/60 (48%)
Query: 38 RQKQIDFGKNTVGYDRYCSMVKREDRTKDHPKTPPKELKYSRRAWDGLIKSWRSRLHFWD 97
R K+I GK+T Y Y +VK E+R D P TP + + WR +LH +D
Sbjct: 527 RLKEIAVGKSTKEYKNYVKVVKYEERMDDDPSTPNAYENVTNAKFQAKYNLWRKKLHRFD 586
>gi|403224078|dbj|BAM42208.1| conserved hypothetical protein [Theileria orientalis strain
Shintoku]
Length = 181
Score = 41.2 bits (95), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 22/71 (30%), Positives = 32/71 (45%), Gaps = 5/71 (7%)
Query: 36 LRRQKQIDFGKNTVGYDRYCSMVKREDRTKD-----HPKTPPKELKYSRRAWDGLIKSWR 90
+ R K I+ K Y +Y +V +E R K HP TP + S W+ + +WR
Sbjct: 7 ISRLKAINLTKLQESYKKYTKVVPKETRVKKLSDSWHPNTPDYRINLSNSLWNKKLSNWR 66
Query: 91 SRLHFWDPPNE 101
+H W NE
Sbjct: 67 KNVHKWSYINE 77
>gi|68010696|ref|XP_670850.1| hypothetical protein [Plasmodium berghei strain ANKA]
gi|56486482|emb|CAI03165.1| conserved hypothetical protein [Plasmodium berghei]
Length = 222
Score = 41.2 bits (95), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 20/65 (30%), Positives = 32/65 (49%), Gaps = 5/65 (7%)
Query: 37 RRQKQIDFGKNTVGYDRYCSMVKREDRTKD-----HPKTPPKELKYSRRAWDGLIKSWRS 91
+R K I+ K + Y+RY + + R + HP+TP + S W+ IK WR
Sbjct: 26 QRLKNINLTKRLISYERYIKAIPKNKRNPNLKNDWHPETPRINKQLSVSQWNKEIKKWRK 85
Query: 92 RLHFW 96
++H W
Sbjct: 86 QIHAW 90
>gi|82704670|ref|XP_726649.1| hypothetical protein [Plasmodium yoelii yoelii 17XNL]
gi|23482149|gb|EAA18214.1| hypothetical protein [Plasmodium yoelii yoelii]
Length = 262
Score = 40.8 bits (94), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 20/65 (30%), Positives = 32/65 (49%), Gaps = 5/65 (7%)
Query: 37 RRQKQIDFGKNTVGYDRYCSMVKREDRTKD-----HPKTPPKELKYSRRAWDGLIKSWRS 91
+R K I+ K + Y+RY + + R + HP+TP + S W+ IK WR
Sbjct: 26 QRLKNINLTKRLISYERYIKAIPKNKRNPNLKNDWHPETPRINKQLSVSQWNKEIKKWRK 85
Query: 92 RLHFW 96
++H W
Sbjct: 86 QIHAW 90
>gi|399218721|emb|CCF75608.1| unnamed protein product [Babesia microti strain RI]
Length = 756
Score = 40.4 bits (93), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 26/69 (37%), Positives = 33/69 (47%)
Query: 29 ETDPAILLRRQKQIDFGKNTVGYDRYCSMVKREDRTKDHPKTPPKELKYSRRAWDGLIKS 88
ET+ + R K I GK T Y Y S V R +RT D P+TP K S + +
Sbjct: 686 ETNMERINARLKDIAVGKTTKEYQNYISKVPRHERTDDDPQTPDPMEKCSSAKFRSKYRI 745
Query: 89 WRSRLHFWD 97
WR LH +D
Sbjct: 746 WRVALHKYD 754
>gi|124506301|ref|XP_001351748.1| conserved Plasmodium protein, unknown function [Plasmodium
falciparum 3D7]
gi|23504677|emb|CAD51555.1| conserved Plasmodium protein, unknown function [Plasmodium
falciparum 3D7]
Length = 293
Score = 40.0 bits (92), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 24/86 (27%), Positives = 40/86 (46%), Gaps = 10/86 (11%)
Query: 21 GSGKKLAYETDPAILLRRQ-----KQIDFGKNTVGYDRYCSMVKREDRTKD-----HPKT 70
G+ K AY+ + L Q K ++ K + Y+RY + + +R D HP+T
Sbjct: 5 GNFMKKAYKNNNIQLSENQINQRIKNVNLTKRLICYERYLKAIPKIERRNDLKNSWHPET 64
Query: 71 PPKELKYSRRAWDGLIKSWRSRLHFW 96
P + S W+ +K WR ++H W
Sbjct: 65 PRYNKQISLSQWNKELKKWRKQIHAW 90
>gi|156084632|ref|XP_001609799.1| hypothetical protein [Babesia bovis T2Bo]
gi|154797051|gb|EDO06231.1| conserved hypothetical protein [Babesia bovis]
Length = 203
Score = 39.7 bits (91), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 30/65 (46%), Gaps = 5/65 (7%)
Query: 38 RQKQIDFGKNTVGYDRYCSMVKREDRTKD-----HPKTPPKELKYSRRAWDGLIKSWRSR 92
R K I K Y+RY + V RE R K+ HP TP S W+ I +WR
Sbjct: 29 RLKNITLTKLNAAYERYTATVPRELRFKELRNSWHPVTPDHRSSLSISQWNQQISNWRHC 88
Query: 93 LHFWD 97
++ W+
Sbjct: 89 VYLWN 93
>gi|294937142|ref|XP_002781979.1| hypothetical protein Pmar_PMAR000934 [Perkinsus marinus ATCC 50983]
gi|239893192|gb|EER13774.1| hypothetical protein Pmar_PMAR000934 [Perkinsus marinus ATCC 50983]
Length = 368
Score = 39.7 bits (91), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 22/59 (37%), Positives = 32/59 (54%), Gaps = 1/59 (1%)
Query: 37 RRQKQIDFGKNTVGYDRY-CSMVKREDRTKDHPKTPPKELKYSRRAWDGLIKSWRSRLH 94
+R +QI+ GK T Y Y S+ R+ P TP + S+RA+D +K WR +LH
Sbjct: 293 QRARQIEIGKMTDNYLAYRASVTPRKRNPAVDPITPDPNERVSKRAFDADLKQWRKKLH 351
>gi|70937935|ref|XP_739709.1| hypothetical protein [Plasmodium chabaudi chabaudi]
gi|56516905|emb|CAH76471.1| conserved hypothetical protein [Plasmodium chabaudi chabaudi]
Length = 222
Score = 39.7 bits (91), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 19/65 (29%), Positives = 32/65 (49%), Gaps = 5/65 (7%)
Query: 37 RRQKQIDFGKNTVGYDRYCSMVKREDRTKD-----HPKTPPKELKYSRRAWDGLIKSWRS 91
+R K I+ K + Y+RY + + R + HP+TP + S W+ +K WR
Sbjct: 26 QRLKNINLTKRLISYERYIKAIPKNKRNPNLKNDWHPETPRINKQLSVSQWNKEMKKWRK 85
Query: 92 RLHFW 96
++H W
Sbjct: 86 QIHAW 90
>gi|339243365|ref|XP_003377608.1| putative protein tag-52 [Trichinella spiralis]
gi|316973576|gb|EFV57147.1| putative protein tag-52 [Trichinella spiralis]
Length = 754
Score = 39.3 bits (90), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 22/68 (32%), Positives = 32/68 (47%), Gaps = 18/68 (26%)
Query: 27 AYETDPAILLRRQKQIDFGKNTVGYDRYCSMVKREDRTKDHPKTPPKELKYSRRAWDGLI 86
+E D A+L RRQK +D G N+ Y +Y + V +RR+WD +
Sbjct: 611 GWEEDQAVLKRRQKDLDKGYNSEAYKKYIAAVP------------------NRRSWDSQV 652
Query: 87 KSWRSRLH 94
+ WR LH
Sbjct: 653 RLWRKMLH 660
>gi|294886295|ref|XP_002771654.1| hypothetical protein Pmar_PMAR014689 [Perkinsus marinus ATCC 50983]
gi|239875360|gb|EER03470.1| hypothetical protein Pmar_PMAR014689 [Perkinsus marinus ATCC 50983]
Length = 421
Score = 39.3 bits (90), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 22/59 (37%), Positives = 32/59 (54%), Gaps = 1/59 (1%)
Query: 37 RRQKQIDFGKNTVGYDRY-CSMVKREDRTKDHPKTPPKELKYSRRAWDGLIKSWRSRLH 94
+R +QI+ GK T Y Y S+ R+ P TP + S+RA+D +K WR +LH
Sbjct: 346 QRARQIEIGKMTDNYLAYRASVTPRKRNPAVDPITPDPNERVSKRAFDADLKQWRKKLH 404
>gi|154338726|ref|XP_001565585.1| conserved hypothetical protein [Leishmania braziliensis
MHOM/BR/75/M2904]
gi|134062637|emb|CAM39079.1| conserved hypothetical protein [Leishmania braziliensis
MHOM/BR/75/M2904]
Length = 846
Score = 38.1 bits (87), Expect = 1.2, Method: Composition-based stats.
Identities = 22/69 (31%), Positives = 35/69 (50%), Gaps = 3/69 (4%)
Query: 39 QKQIDFGKNTVGYDRYCSMVKREDRTKDH---PKTPPKELKYSRRAWDGLIKSWRSRLHF 95
+KQI FG T GY ++ + + P +PP+ + S+R WD ++ WR LH
Sbjct: 174 EKQIQFGYVTDGYTNMKRLIAHDPLLRSGGILPLSPPEIVNGSKRQWDIQLRKWRRALHM 233
Query: 96 WDPPNENGE 104
+D +GE
Sbjct: 234 FDYVFIDGE 242
>gi|84996669|ref|XP_953056.1| hypothetical protein [Theileria annulata strain Ankara]
gi|65304052|emb|CAI76431.1| hypothetical protein, conserved [Theileria annulata]
Length = 177
Score = 37.4 bits (85), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 20/65 (30%), Positives = 31/65 (47%), Gaps = 5/65 (7%)
Query: 38 RQKQIDFGKNTVGYDRYCSMVKREDRTKD-----HPKTPPKELKYSRRAWDGLIKSWRSR 92
R K ++ K Y RY +V R+ R K+ H +TP L + W+ + +WR
Sbjct: 7 RLKAVNLTKLQDSYKRYVRVVPRQLRVKELSDSWHSRTPDYRLNLTHSKWNKRLSNWRKL 66
Query: 93 LHFWD 97
+H WD
Sbjct: 67 VHRWD 71
>gi|237829751|ref|XP_002364173.1| hypothetical protein TGME49_109040 [Toxoplasma gondii ME49]
gi|211961837|gb|EEA97032.1| hypothetical protein TGME49_109040 [Toxoplasma gondii ME49]
gi|221481086|gb|EEE19494.1| conserved hypothetical protein [Toxoplasma gondii GT1]
gi|221507034|gb|EEE32638.1| conserved hypothetical protein [Toxoplasma gondii VEG]
Length = 616
Score = 37.4 bits (85), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 19/60 (31%), Positives = 30/60 (50%)
Query: 38 RQKQIDFGKNTVGYDRYCSMVKREDRTKDHPKTPPKELKYSRRAWDGLIKSWRSRLHFWD 97
R K I GK T GY + V ++ R + P TP + + S+ + + WR +LH +D
Sbjct: 480 RMKDIAIGKATEGYRNFIRAVPKDQRREGDPATPDPKQRCSKAQFQREYQDWRKQLHRYD 539
>gi|403221624|dbj|BAM39756.1| conserved hypothetical protein [Theileria orientalis strain
Shintoku]
Length = 347
Score = 37.0 bits (84), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 25/87 (28%), Positives = 38/87 (43%), Gaps = 12/87 (13%)
Query: 22 SGKKLAYETDPAILLRRQKQIDFGKNT-----------VGYDRYCSMVKREDRTKDHPKT 70
S K E + + R K I GK T GY Y M+ +++R D P+T
Sbjct: 259 SNKNKVVEDANSRVYSRLKDIAIGKATKHSTVRQVHVLQGYQNYIRMIPKDERGPDDPQT 318
Query: 71 PPKELKYSRRAWDGLIKSWRSRLHFWD 97
P S + + ++WR+RLH +D
Sbjct: 319 PDSR-NVSASKFRAIYRTWRTRLHKYD 344
>gi|428177056|gb|EKX45938.1| hypothetical protein GUITHDRAFT_108389 [Guillardia theta CCMP2712]
Length = 389
Score = 36.6 bits (83), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 24/74 (32%), Positives = 33/74 (44%), Gaps = 8/74 (10%)
Query: 29 ETDPAILLRRQKQIDFGKNTVGYDRYCSMVKREDRTKDHPKTP--------PKELKYSRR 80
E D L RQKQID GKNT GY R + +D P L +R
Sbjct: 263 EIDETKLRARQKQIDIGKNTEGYKRLMDQGFSGRQLQDIIGLPYITEEGVLELTLICGKR 322
Query: 81 AWDGLIKSWRSRLH 94
+DG ++ W+ +L+
Sbjct: 323 RYDGYLRMWKRKLY 336
>gi|194767643|ref|XP_001965924.1| GF11551 [Drosophila ananassae]
gi|190619767|gb|EDV35291.1| GF11551 [Drosophila ananassae]
Length = 2881
Score = 35.8 bits (81), Expect = 5.5, Method: Compositional matrix adjust.
Identities = 27/89 (30%), Positives = 39/89 (43%), Gaps = 16/89 (17%)
Query: 45 GKNTVGYDRYCSMVKREDRTKDHPKTPPKELKYSRRAWDGLIKSW------------RSR 92
G NTV +R S V E DH PP K++R+A + L+ W RS
Sbjct: 1346 GSNTVISNRKSSTVDMESDMPDHDLEPP---KFARKALERLLIDWNAVRSMIMSGAERSE 1402
Query: 93 LHFWDPP-NENGEPNSLLLDEDDDISSLD 120
HF +PP N + E ++ + + LD
Sbjct: 1403 AHFQNPPDNSSSEGFNMFIQTQHGSTLLD 1431
>gi|71028766|ref|XP_764026.1| hypothetical protein [Theileria parva strain Muguga]
gi|68350980|gb|EAN31743.1| hypothetical protein TP04_0391 [Theileria parva]
Length = 178
Score = 35.8 bits (81), Expect = 6.5, Method: Compositional matrix adjust.
Identities = 20/65 (30%), Positives = 30/65 (46%), Gaps = 5/65 (7%)
Query: 38 RQKQIDFGKNTVGYDRYCSMVKREDRTKD-----HPKTPPKELKYSRRAWDGLIKSWRSR 92
R + I+ K Y RY +V R R K+ H +TP L + W+ + +WR
Sbjct: 7 RLRAINLTKLQDSYRRYVRVVPRHLRVKELSDSWHSRTPDYRLNLTHSKWNKRLSNWRRL 66
Query: 93 LHFWD 97
+H WD
Sbjct: 67 VHRWD 71
>gi|401411007|ref|XP_003884951.1| hypothetical protein NCLIV_053490 [Neospora caninum Liverpool]
gi|325119370|emb|CBZ54923.1| hypothetical protein NCLIV_053490 [Neospora caninum Liverpool]
Length = 623
Score = 35.0 bits (79), Expect = 9.6, Method: Compositional matrix adjust.
Identities = 17/60 (28%), Positives = 30/60 (50%)
Query: 38 RQKQIDFGKNTVGYDRYCSMVKREDRTKDHPKTPPKELKYSRRAWDGLIKSWRSRLHFWD 97
R K I GK T GY + + ++ R + P TP + + ++ + + WR +LH +D
Sbjct: 483 RMKDIAIGKATEGYRNFIRAIPKDQRREGDPATPDPKQRCTKAQFQREYQDWRKQLHRYD 542
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.312 0.131 0.402
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 2,964,006,808
Number of Sequences: 23463169
Number of extensions: 128018546
Number of successful extensions: 240386
Number of sequences better than 100.0: 286
Number of HSP's better than 100.0 without gapping: 224
Number of HSP's successfully gapped in prelim test: 62
Number of HSP's that attempted gapping in prelim test: 239997
Number of HSP's gapped (non-prelim): 301
length of query: 159
length of database: 8,064,228,071
effective HSP length: 121
effective length of query: 38
effective length of database: 9,520,151,918
effective search space: 361765772884
effective search space used: 361765772884
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.8 bits)
S2: 71 (32.0 bits)