Your job contains 1 sequence.
>psy676
MVRATRHNTNANKKSGPGTPGSGKKLAYETDPAILLRRQKQIDFGKNTVGYDRYCSMVKR
EDRTKDHPKTPPKELKYSRRAWDGLIKSWRSRLHFWDPPNENGEPNSLLLDEDDDISSLD
SQSVDSLPCTPIQEWKRRVRAKRESLSEDEEEDCKPLQD
The BLAST search returned 2 gene products which did not match your query constraints. Please see the full BLAST report below for the details.
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= psy676
(159 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
FB|FBgn0041186 - symbol:Slbp "Stem-loop binding protein" ... 270 1.8e-23 1
UNIPROTKB|E1BZZ0 - symbol:E1BZZ0 "Uncharacterized protein... 226 1.2e-21 2
UNIPROTKB|C9IY53 - symbol:SLBP "Histone RNA hairpin-bindi... 250 2.4e-21 1
UNIPROTKB|E7EUV9 - symbol:SLBP "Histone RNA hairpin-bindi... 250 2.4e-21 1
UNIPROTKB|F8W8D3 - symbol:SLBP "Histone RNA hairpin-bindi... 250 2.4e-21 1
UNIPROTKB|H0YAE8 - symbol:SLBP "Histone RNA hairpin-bindi... 250 2.4e-21 1
UNIPROTKB|Q14493 - symbol:SLBP "Histone RNA hairpin-bindi... 250 2.4e-21 1
UNIPROTKB|E2RDE5 - symbol:SLBP "Uncharacterized protein" ... 247 4.9e-21 1
UNIPROTKB|F1MQ42 - symbol:LOC100335526 "Uncharacterized p... 244 1.0e-20 1
MGI|MGI:108402 - symbol:Slbp "stem-loop binding protein" ... 244 1.0e-20 1
UNIPROTKB|F1S9F2 - symbol:SLBP "Uncharacterized protein" ... 238 4.4e-20 1
UNIPROTKB|I3L934 - symbol:I3L934 "Uncharacterized protein... 238 4.4e-20 1
UNIPROTKB|I3LF37 - symbol:I3LF37 "Uncharacterized protein... 238 4.4e-20 1
UNIPROTKB|I3LKL2 - symbol:I3LKL2 "Uncharacterized protein... 238 4.4e-20 1
UNIPROTKB|Q6B7Z7 - symbol:SLBP "Histone stem-loop bindng ... 236 7.2e-20 1
ZFIN|ZDB-GENE-030131-9686 - symbol:slbp "stem-loop bindin... 235 9.2e-20 1
UNIPROTKB|I3LHJ1 - symbol:LOC100515533 "Uncharacterized p... 221 2.8e-18 1
UNIPROTKB|F1LKN1 - symbol:SLBP2 "Stem loop binding protei... 213 2.0e-17 1
UNIPROTKB|J9NYP0 - symbol:LOC474694 "Uncharacterized prot... 213 2.0e-17 1
UNIPROTKB|J9PB07 - symbol:LOC474694 "Uncharacterized prot... 213 2.0e-17 1
ZFIN|ZDB-GENE-070112-1722 - symbol:zgc:158856 "zgc:158856... 197 1.7e-15 1
DICTYBASE|DDB_G0277383 - symbol:DDB_G0277383 species:4468... 179 6.0e-13 1
WB|WBGene00000411 - symbol:cdl-1 species:6239 "Caenorhabd... 158 6.1e-11 1
UNIPROTKB|H7C4H8 - symbol:SLBP "Histone RNA hairpin-bindi... 147 2.0e-10 1
RGD|1584682 - symbol:Slbp "stem-loop binding protein" spe... 142 1.6e-09 1
>FB|FBgn0041186 [details] [associations]
symbol:Slbp "Stem-loop binding protein" species:7227
"Drosophila melanogaster" [GO:0008334 "histone mRNA metabolic
process" evidence=IMP] [GO:0003729 "mRNA binding" evidence=NAS;IMP]
[GO:0006398 "histone mRNA 3'-end processing" evidence=IDA;IMP;NAS]
[GO:0007049 "cell cycle" evidence=IMP;NAS] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0035613
"RNA stem-loop binding" evidence=IDA] InterPro:IPR026502
EMBL:AE014297 GO:GO:0007275 GO:GO:0005634 GO:GO:0005737
GO:GO:0003729 GO:GO:0007049 GO:GO:0006398 GO:GO:0035613
EMBL:AF186594 eggNOG:NOG278381 GeneTree:ENSGT00390000008738
PANTHER:PTHR17408 EMBL:AF258617 EMBL:AY089675 EMBL:AY118836
RefSeq:NP_477480.1 UniGene:Dm.4801 DisProt:DP00144
ProteinModelPortal:Q9VAN6 SMR:Q9VAN6 STRING:Q9VAN6 PaxDb:Q9VAN6
PRIDE:Q9VAN6 EnsemblMetazoa:FBtr0085409 GeneID:43448
KEGG:dme:Dmel_CG11886 CTD:7884 FlyBase:FBgn0041186
InParanoid:Q9VAN6 OMA:GHSDEAS OrthoDB:EOG4BNZV8 PhylomeDB:Q9VAN6
GenomeRNAi:43448 NextBio:834002 Bgee:Q9VAN6 GermOnline:CG11886
Uniprot:Q9VAN6
Length = 276
Score = 270 (100.1 bits), Expect = 1.8e-23, P = 1.8e-23
Identities = 47/73 (64%), Positives = 58/73 (79%)
Query: 29 ETDPAILLRRQKQIDFGKNTVGYDRYCSMVKREDRTKDHPKTPPKELKYSRRAWDGLIKS 88
E DPAIL RRQKQID+GKNT Y+RY MV +++RT+DHP+TP K KYSRRA+DGL+K
Sbjct: 189 EADPAILSRRQKQIDYGKNTAAYERYVEMVPKDERTRDHPRTPNKYGKYSRRAFDGLVKI 248
Query: 89 WRSRLHFWDPPNE 101
WR LH +DPP +
Sbjct: 249 WRKSLHIYDPPTQ 261
>UNIPROTKB|E1BZZ0 [details] [associations]
symbol:E1BZZ0 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0003729 "mRNA binding" evidence=IEA]
InterPro:IPR026502 GO:GO:0003729 GeneTree:ENSGT00390000008738
PANTHER:PTHR17408 EMBL:AADN02014926 IPI:IPI00598576
Ensembl:ENSGALT00000032028 OMA:KIALHAW Uniprot:E1BZZ0
Length = 205
Score = 226 (84.6 bits), Expect = 1.2e-21, Sum P(2) = 1.2e-21
Identities = 42/74 (56%), Positives = 50/74 (67%)
Query: 29 ETDPAILLRRQKQIDFGKNTVGYDRYCSMVKREDRTKD-HPKTPPKELKYSRRAWDGLIK 87
ETD +L RRQKQI+FGKNT+ YDRY V + R HP+TP K KYSRR+WD I+
Sbjct: 23 ETDEVVLRRRQKQINFGKNTLAYDRYIKEVPKNQRIPGVHPRTPNKFKKYSRRSWDQQIR 82
Query: 88 SWRSRLHFWDPPNE 101
W+ LH WDPP E
Sbjct: 83 LWKIALHAWDPPTE 96
Score = 41 (19.5 bits), Expect = 1.2e-21, Sum P(2) = 1.2e-21
Identities = 9/20 (45%), Positives = 11/20 (55%)
Query: 128 PCTPIQE--WKRRVRAKRES 145
PC+P WKRR R +S
Sbjct: 151 PCSPDSSPVWKRRKRNNPDS 170
>UNIPROTKB|C9IY53 [details] [associations]
symbol:SLBP "Histone RNA hairpin-binding protein"
species:9606 "Homo sapiens" [GO:0003729 "mRNA binding"
evidence=IEA] InterPro:IPR026502 GO:GO:0003729 EMBL:AC016773
PANTHER:PTHR17408 HGNC:HGNC:10904 HOGENOM:HOG000065710
IPI:IPI00946311 ProteinModelPortal:C9IY53 SMR:C9IY53 STRING:C9IY53
Ensembl:ENST00000460392 ArrayExpress:C9IY53 Bgee:C9IY53
Uniprot:C9IY53
Length = 250
Score = 250 (93.1 bits), Expect = 2.4e-21, P = 2.4e-21
Identities = 46/77 (59%), Positives = 55/77 (71%)
Query: 28 YETDPAILLRRQKQIDFGKNTVGYDRYCSMVKREDRTKD-HPKTPPKELKYSRRAWDGLI 86
+ETD ++L+RRQKQI++GKNT+ YDRY V R R HPKTP K KYSRR+WD I
Sbjct: 108 FETDESVLMRRQKQINYGKNTIAYDRYIKEVPRHLRQPGIHPKTPNKFKKYSRRSWDQQI 167
Query: 87 KSWRSRLHFWDPPNENG 103
K W+ LHFWDPP E G
Sbjct: 168 KLWKVALHFWDPPAEEG 184
>UNIPROTKB|E7EUV9 [details] [associations]
symbol:SLBP "Histone RNA hairpin-binding protein"
species:9606 "Homo sapiens" [GO:0003729 "mRNA binding"
evidence=IEA] InterPro:IPR026502 GO:GO:0003729 EMBL:AC016773
PANTHER:PTHR17408 HGNC:HGNC:10904 IPI:IPI00908740
ProteinModelPortal:E7EUV9 SMR:E7EUV9 Ensembl:ENST00000488267
UCSC:uc011bvf.1 ArrayExpress:E7EUV9 Bgee:E7EUV9 Uniprot:E7EUV9
Length = 235
Score = 250 (93.1 bits), Expect = 2.4e-21, P = 2.4e-21
Identities = 46/77 (59%), Positives = 55/77 (71%)
Query: 28 YETDPAILLRRQKQIDFGKNTVGYDRYCSMVKREDRTKD-HPKTPPKELKYSRRAWDGLI 86
+ETD ++L+RRQKQI++GKNT+ YDRY V R R HPKTP K KYSRR+WD I
Sbjct: 93 FETDESVLMRRQKQINYGKNTIAYDRYIKEVPRHLRQPGIHPKTPNKFKKYSRRSWDQQI 152
Query: 87 KSWRSRLHFWDPPNENG 103
K W+ LHFWDPP E G
Sbjct: 153 KLWKVALHFWDPPAEEG 169
>UNIPROTKB|F8W8D3 [details] [associations]
symbol:SLBP "Histone RNA hairpin-binding protein"
species:9606 "Homo sapiens" [GO:0003729 "mRNA binding"
evidence=IEA] InterPro:IPR026502 GO:GO:0003729 EMBL:AC016773
PANTHER:PTHR17408 HGNC:HGNC:10904 OMA:MYSGTPT IPI:IPI00947027
ProteinModelPortal:F8W8D3 SMR:F8W8D3 Ensembl:ENST00000318386
ArrayExpress:F8W8D3 Bgee:F8W8D3 Uniprot:F8W8D3
Length = 277
Score = 250 (93.1 bits), Expect = 2.4e-21, P = 2.4e-21
Identities = 46/77 (59%), Positives = 55/77 (71%)
Query: 28 YETDPAILLRRQKQIDFGKNTVGYDRYCSMVKREDRTKD-HPKTPPKELKYSRRAWDGLI 86
+ETD ++L+RRQKQI++GKNT+ YDRY V R R HPKTP K KYSRR+WD I
Sbjct: 135 FETDESVLMRRQKQINYGKNTIAYDRYIKEVPRHLRQPGIHPKTPNKFKKYSRRSWDQQI 194
Query: 87 KSWRSRLHFWDPPNENG 103
K W+ LHFWDPP E G
Sbjct: 195 KLWKVALHFWDPPAEEG 211
>UNIPROTKB|H0YAE8 [details] [associations]
symbol:SLBP "Histone RNA hairpin-binding protein"
species:9606 "Homo sapiens" [GO:0003729 "mRNA binding"
evidence=IEA] InterPro:IPR026502 GO:GO:0003729 EMBL:AC016773
PANTHER:PTHR17408 HGNC:HGNC:10904 Ensembl:ENST00000483348
Uniprot:H0YAE8
Length = 225
Score = 250 (93.1 bits), Expect = 2.4e-21, P = 2.4e-21
Identities = 46/77 (59%), Positives = 55/77 (71%)
Query: 28 YETDPAILLRRQKQIDFGKNTVGYDRYCSMVKREDRTKD-HPKTPPKELKYSRRAWDGLI 86
+ETD ++L+RRQKQI++GKNT+ YDRY V R R HPKTP K KYSRR+WD I
Sbjct: 83 FETDESVLMRRQKQINYGKNTIAYDRYIKEVPRHLRQPGIHPKTPNKFKKYSRRSWDQQI 142
Query: 87 KSWRSRLHFWDPPNENG 103
K W+ LHFWDPP E G
Sbjct: 143 KLWKVALHFWDPPAEEG 159
>UNIPROTKB|Q14493 [details] [associations]
symbol:SLBP "Histone RNA hairpin-binding protein"
species:9606 "Homo sapiens" [GO:0005515 "protein binding"
evidence=IPI] [GO:0071208 "histone pre-mRNA DCP binding"
evidence=ISS] [GO:0003729 "mRNA binding" evidence=IDA] [GO:0005634
"nucleus" evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA]
[GO:0033260 "DNA replication involved in S phase" evidence=IMP]
[GO:0033261 "regulation of S phase" evidence=IMP] [GO:0051028 "mRNA
transport" evidence=IDA] [GO:0071204 "histone pre-mRNA 3'end
processing complex" evidence=ISS] [GO:0006398 "histone mRNA 3'-end
processing" evidence=ISS] [GO:0071207 "histone pre-mRNA stem-loop
binding" evidence=ISS] [GO:0030529 "ribonucleoprotein complex"
evidence=TAS] [GO:0005654 "nucleoplasm" evidence=TAS] [GO:0005829
"cytosol" evidence=TAS] [GO:0006366 "transcription from RNA
polymerase II promoter" evidence=TAS] [GO:0006369 "termination of
RNA polymerase II transcription" evidence=TAS] [GO:0006397 "mRNA
processing" evidence=TAS] [GO:0006406 "mRNA export from nucleus"
evidence=TAS] [GO:0008334 "histone mRNA metabolic process"
evidence=TAS] [GO:0010467 "gene expression" evidence=TAS]
Reactome:REACT_71 InterPro:IPR026502 GO:GO:0005829 GO:GO:0005654
EMBL:CH471131 Reactome:REACT_1675 GO:GO:0003729 GO:GO:0006406
Reactome:REACT_1788 GO:GO:0033261 GO:GO:0006369 Reactome:REACT_78
GO:GO:0006398 GO:GO:0071204 GO:GO:0071207 EMBL:AC016773
GO:GO:0071208 GO:GO:0033260 eggNOG:NOG278381 PANTHER:PTHR17408
CTD:7884 EMBL:M63544 EMBL:U75679 EMBL:Z71188 EMBL:AK091735
EMBL:BC014908 EMBL:BC015703 IPI:IPI00031015 IPI:IPI00947182
RefSeq:NP_006518.1 UniGene:Hs.298345 PDB:2KJM PDBsum:2KJM
ProteinModelPortal:Q14493 SMR:Q14493 IntAct:Q14493 STRING:Q14493
PhosphoSite:Q14493 DMDM:9789785 PaxDb:Q14493 PeptideAtlas:Q14493
PRIDE:Q14493 DNASU:7884 Ensembl:ENST00000429429
Ensembl:ENST00000489418 GeneID:7884 KEGG:hsa:7884 UCSC:uc003gdi.1
GeneCards:GC04M001694 HGNC:HGNC:10904 HPA:HPA019254 MIM:602422
neXtProt:NX_Q14493 PharmGKB:PA35804 HOGENOM:HOG000065710
HOVERGEN:HBG017805 InParanoid:Q14493 OrthoDB:EOG4J1196
PhylomeDB:Q14493 EvolutionaryTrace:Q14493 GenomeRNAi:7884
NextBio:30350 ArrayExpress:Q14493 Bgee:Q14493 CleanEx:HS_SLBP
Genevestigator:Q14493 GermOnline:ENSG00000163950 Uniprot:Q14493
Length = 270
Score = 250 (93.1 bits), Expect = 2.4e-21, P = 2.4e-21
Identities = 46/77 (59%), Positives = 55/77 (71%)
Query: 28 YETDPAILLRRQKQIDFGKNTVGYDRYCSMVKREDRTKD-HPKTPPKELKYSRRAWDGLI 86
+ETD ++L+RRQKQI++GKNT+ YDRY V R R HPKTP K KYSRR+WD I
Sbjct: 128 FETDESVLMRRQKQINYGKNTIAYDRYIKEVPRHLRQPGIHPKTPNKFKKYSRRSWDQQI 187
Query: 87 KSWRSRLHFWDPPNENG 103
K W+ LHFWDPP E G
Sbjct: 188 KLWKVALHFWDPPAEEG 204
>UNIPROTKB|E2RDE5 [details] [associations]
symbol:SLBP "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0071207 "histone pre-mRNA stem-loop binding"
evidence=IEA] [GO:0071204 "histone pre-mRNA 3'end processing
complex" evidence=IEA] [GO:0051028 "mRNA transport" evidence=IEA]
[GO:0033261 "regulation of S phase" evidence=IEA] [GO:0033260 "DNA
replication involved in S phase" evidence=IEA] [GO:0006398 "histone
mRNA 3'-end processing" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0003729 "mRNA binding" evidence=IEA]
InterPro:IPR026502 GO:GO:0005737 GO:GO:0003729 GO:GO:0051028
GO:GO:0033261 GO:GO:0006398 GO:GO:0071204 GO:GO:0071207
GO:GO:0033260 GeneTree:ENSGT00390000008738 PANTHER:PTHR17408
CTD:7884 OMA:MYSGTPT EMBL:AAEX03002462 RefSeq:XP_545928.2
Ensembl:ENSCAFT00000023830 GeneID:488810 KEGG:cfa:488810
Uniprot:E2RDE5
Length = 275
Score = 247 (92.0 bits), Expect = 4.9e-21, P = 4.9e-21
Identities = 46/76 (60%), Positives = 54/76 (71%)
Query: 29 ETDPAILLRRQKQIDFGKNTVGYDRYCSMVKREDRTKD-HPKTPPKELKYSRRAWDGLIK 87
ETD ++L+RRQKQI++GKNT+ YDRY V R R HPKTP K KYSRR+WD IK
Sbjct: 129 ETDESVLMRRQKQINYGKNTIAYDRYIKEVPRHLRQPGIHPKTPNKFKKYSRRSWDQQIK 188
Query: 88 SWRSRLHFWDPPNENG 103
W+ LHFWDPP E G
Sbjct: 189 LWKVALHFWDPPAEEG 204
>UNIPROTKB|F1MQ42 [details] [associations]
symbol:LOC100335526 "Uncharacterized protein" species:9913
"Bos taurus" [GO:0071207 "histone pre-mRNA stem-loop binding"
evidence=IEA] [GO:0071204 "histone pre-mRNA 3'end processing
complex" evidence=IEA] [GO:0051028 "mRNA transport" evidence=IEA]
[GO:0033261 "regulation of S phase" evidence=IEA] [GO:0033260 "DNA
replication involved in S phase" evidence=IEA] [GO:0006398 "histone
mRNA 3'-end processing" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0003729 "mRNA binding" evidence=IEA]
InterPro:IPR026502 GO:GO:0005737 GO:GO:0003729 GO:GO:0051028
GO:GO:0033261 GO:GO:0006398 GO:GO:0071204 GO:GO:0071207
GO:GO:0033260 GeneTree:ENSGT00390000008738 PANTHER:PTHR17408
OMA:MYSGTPT EMBL:DAAA02018566 IPI:IPI00707089
Ensembl:ENSBTAT00000001753 ArrayExpress:F1MQ42 Uniprot:F1MQ42
Length = 275
Score = 244 (91.0 bits), Expect = 1.0e-20, P = 1.0e-20
Identities = 45/76 (59%), Positives = 54/76 (71%)
Query: 29 ETDPAILLRRQKQIDFGKNTVGYDRYCSMVKREDRTKD-HPKTPPKELKYSRRAWDGLIK 87
ETD ++L+RRQKQI++GKNT+ YDRY V R R HPKTP K KYSRR+WD I+
Sbjct: 129 ETDESVLMRRQKQINYGKNTIAYDRYIKEVPRHLRQPGVHPKTPNKFKKYSRRSWDQQIR 188
Query: 88 SWRSRLHFWDPPNENG 103
W+ LHFWDPP E G
Sbjct: 189 LWKVALHFWDPPAEEG 204
>MGI|MGI:108402 [details] [associations]
symbol:Slbp "stem-loop binding protein" species:10090 "Mus
musculus" [GO:0003723 "RNA binding" evidence=IEA] [GO:0003729 "mRNA
binding" evidence=ISO;IDA] [GO:0005634 "nucleus" evidence=ISO;IDA]
[GO:0005737 "cytoplasm" evidence=ISO;IDA] [GO:0006397 "mRNA
processing" evidence=IEA] [GO:0006398 "histone mRNA 3'-end
processing" evidence=IDA] [GO:0030529 "ribonucleoprotein complex"
evidence=IDA] [GO:0033260 "DNA replication involved in S phase"
evidence=ISO] [GO:0033261 "regulation of S phase" evidence=ISO]
[GO:0051028 "mRNA transport" evidence=ISO] [GO:0071204 "histone
pre-mRNA 3'end processing complex" evidence=IDA] [GO:0071207
"histone pre-mRNA stem-loop binding" evidence=IDA]
InterPro:IPR026502 MGI:MGI:108402 GO:GO:0005737 GO:GO:0003729
GO:GO:0051028 GO:GO:0033261 GO:GO:0006398 GO:GO:0071204
GO:GO:0071207 GO:GO:0033260 eggNOG:NOG278381 PANTHER:PTHR17408
CTD:7884 HOGENOM:HOG000065710 HOVERGEN:HBG017805 OrthoDB:EOG4J1196
EMBL:U75680 IPI:IPI00125396 RefSeq:NP_033219.1 UniGene:Mm.4172
ProteinModelPortal:P97440 SMR:P97440 STRING:P97440
PhosphoSite:P97440 PaxDb:P97440 PRIDE:P97440
Ensembl:ENSMUST00000057551 GeneID:20492 KEGG:mmu:20492
InParanoid:P97440 OMA:MYSGTPT NextBio:298633 Bgee:P97440
CleanEx:MM_SLBP Genevestigator:P97440 GermOnline:ENSMUSG00000004642
Uniprot:P97440
Length = 275
Score = 244 (91.0 bits), Expect = 1.0e-20, P = 1.0e-20
Identities = 45/76 (59%), Positives = 54/76 (71%)
Query: 29 ETDPAILLRRQKQIDFGKNTVGYDRYCSMVKREDRTKD-HPKTPPKELKYSRRAWDGLIK 87
ETD ++L+RRQKQI++GKNT+ YDRY V R R HP+TP K KYSRR+WD IK
Sbjct: 129 ETDESVLMRRQKQINYGKNTIAYDRYIKEVPRHLRQPGIHPRTPNKFKKYSRRSWDQQIK 188
Query: 88 SWRSRLHFWDPPNENG 103
W+ LHFWDPP E G
Sbjct: 189 LWKVALHFWDPPAEEG 204
>UNIPROTKB|F1S9F2 [details] [associations]
symbol:SLBP "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0003729 "mRNA binding" evidence=IEA] InterPro:IPR026502
GO:GO:0003729 GeneTree:ENSGT00390000008738 PANTHER:PTHR17408
OMA:MYSGTPT EMBL:FP102127 Ensembl:ENSSSCT00000009493 Uniprot:F1S9F2
Length = 217
Score = 238 (88.8 bits), Expect = 4.4e-20, P = 4.4e-20
Identities = 44/76 (57%), Positives = 53/76 (69%)
Query: 29 ETDPAILLRRQKQIDFGKNTVGYDRYCSMVKREDRTKD-HPKTPPKELKYSRRAWDGLIK 87
ETD ++L+RRQKQI++GKNT+ YDRY V R R HP+TP K KYSRR+WD IK
Sbjct: 71 ETDESVLMRRQKQINYGKNTIAYDRYIKEVPRHLRQPGVHPRTPNKFKKYSRRSWDQQIK 130
Query: 88 SWRSRLHFWDPPNENG 103
W+ LHFWDPP G
Sbjct: 131 LWKVALHFWDPPAAEG 146
>UNIPROTKB|I3L934 [details] [associations]
symbol:I3L934 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0003729 "mRNA binding" evidence=IEA] InterPro:IPR026502
GO:GO:0003729 GeneTree:ENSGT00390000008738 PANTHER:PTHR17408
Ensembl:ENSSSCT00000032212 Uniprot:I3L934
Length = 198
Score = 238 (88.8 bits), Expect = 4.4e-20, P = 4.4e-20
Identities = 44/76 (57%), Positives = 53/76 (69%)
Query: 29 ETDPAILLRRQKQIDFGKNTVGYDRYCSMVKREDRTKD-HPKTPPKELKYSRRAWDGLIK 87
ETD ++L+RRQKQI++GKNT+ YDRY V R R HP+TP K KYSRR+WD IK
Sbjct: 71 ETDESVLMRRQKQINYGKNTIAYDRYIKEVPRHLRQPGVHPRTPNKFKKYSRRSWDQQIK 130
Query: 88 SWRSRLHFWDPPNENG 103
W+ LHFWDPP G
Sbjct: 131 LWKVALHFWDPPAAEG 146
>UNIPROTKB|I3LF37 [details] [associations]
symbol:I3LF37 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0003729 "mRNA binding" evidence=IEA] InterPro:IPR026502
GO:GO:0003729 GeneTree:ENSGT00390000008738 PANTHER:PTHR17408
Ensembl:ENSSSCT00000029708 Uniprot:I3LF37
Length = 195
Score = 238 (88.8 bits), Expect = 4.4e-20, P = 4.4e-20
Identities = 44/76 (57%), Positives = 53/76 (69%)
Query: 29 ETDPAILLRRQKQIDFGKNTVGYDRYCSMVKREDRTKD-HPKTPPKELKYSRRAWDGLIK 87
ETD ++L+RRQKQI++GKNT+ YDRY V R R HP+TP K KYSRR+WD IK
Sbjct: 67 ETDESVLMRRQKQINYGKNTIAYDRYIKEVPRHLRQPGVHPRTPNKFKKYSRRSWDQQIK 126
Query: 88 SWRSRLHFWDPPNENG 103
W+ LHFWDPP G
Sbjct: 127 LWKVALHFWDPPAAEG 142
>UNIPROTKB|I3LKL2 [details] [associations]
symbol:I3LKL2 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0003729 "mRNA binding" evidence=IEA] InterPro:IPR026502
GO:GO:0003729 GeneTree:ENSGT00390000008738 PANTHER:PTHR17408
Ensembl:ENSSSCT00000026425 OMA:SAVEGNE Uniprot:I3LKL2
Length = 200
Score = 238 (88.8 bits), Expect = 4.4e-20, P = 4.4e-20
Identities = 44/76 (57%), Positives = 53/76 (69%)
Query: 29 ETDPAILLRRQKQIDFGKNTVGYDRYCSMVKREDRTKD-HPKTPPKELKYSRRAWDGLIK 87
ETD ++L+RRQKQI++GKNT+ YDRY V R R HP+TP K KYSRR+WD IK
Sbjct: 73 ETDESVLMRRQKQINYGKNTIAYDRYIKEVPRHLRQPGVHPRTPNKFKKYSRRSWDQQIK 132
Query: 88 SWRSRLHFWDPPNENG 103
W+ LHFWDPP G
Sbjct: 133 LWKVALHFWDPPAAEG 148
>UNIPROTKB|Q6B7Z7 [details] [associations]
symbol:SLBP "Histone stem-loop bindng protein" species:9031
"Gallus gallus" [GO:0003729 "mRNA binding" evidence=IEA]
InterPro:IPR026502 GO:GO:0005737 GO:GO:0003729 GO:GO:0051028
GO:GO:0033261 GO:GO:0006398 GO:GO:0071204 GO:GO:0071207
GO:GO:0033260 eggNOG:NOG278381 GeneTree:ENSGT00390000008738
PANTHER:PTHR17408 CTD:7884 HOGENOM:HOG000065710 HOVERGEN:HBG017805
OrthoDB:EOG4J1196 OMA:MYSGTPT EMBL:AADN02014926 EMBL:AY675345
EMBL:AJ719644 IPI:IPI00586327 RefSeq:NP_001004403.1
UniGene:Gga.21414 STRING:Q6B7Z7 Ensembl:ENSGALT00000025338
GeneID:422902 KEGG:gga:422902 InParanoid:Q6B7Z7 NextBio:20825463
Uniprot:Q6B7Z7
Length = 274
Score = 236 (88.1 bits), Expect = 7.2e-20, P = 7.2e-20
Identities = 44/76 (57%), Positives = 52/76 (68%)
Query: 29 ETDPAILLRRQKQIDFGKNTVGYDRYCSMVKREDRTKD-HPKTPPKELKYSRRAWDGLIK 87
ETD +L+RRQKQI++GKNT+ YDRY V R R HP+TP K KYSRR+WD IK
Sbjct: 127 ETDEVVLMRRQKQINYGKNTIAYDRYIKEVPRCHRIPGVHPRTPNKFKKYSRRSWDQQIK 186
Query: 88 SWRSRLHFWDPPNENG 103
W+ LH WDPP E G
Sbjct: 187 LWKVALHSWDPPTEEG 202
>ZFIN|ZDB-GENE-030131-9686 [details] [associations]
symbol:slbp "stem-loop binding protein"
species:7955 "Danio rerio" [GO:0003729 "mRNA binding" evidence=IEA]
InterPro:IPR026502 ZFIN:ZDB-GENE-030131-9686 GO:GO:0003729
GeneTree:ENSGT00390000008738 PANTHER:PTHR17408 EMBL:BX323828
IPI:IPI00998695 Ensembl:ENSDART00000123178 ArrayExpress:F1QEQ1
Bgee:F1QEQ1 Uniprot:F1QEQ1
Length = 302
Score = 235 (87.8 bits), Expect = 9.2e-20, P = 9.2e-20
Identities = 45/76 (59%), Positives = 52/76 (68%)
Query: 29 ETDPAILLRRQKQIDFGKNTVGYDRYCSMVKREDRTKD-HPKTPPKELKYSRRAWDGLIK 87
ETD L+RRQKQI++GKNT+ YDRY V + R HPKTP K KYSRR+WD IK
Sbjct: 165 ETDETTLIRRQKQINYGKNTLAYDRYIKEVPKHLRQPGVHPKTPNKFKKYSRRSWDQQIK 224
Query: 88 SWRSRLHFWDPPNENG 103
WR +LH WDPP E G
Sbjct: 225 LWRVKLHAWDPPAEEG 240
>UNIPROTKB|I3LHJ1 [details] [associations]
symbol:LOC100515533 "Uncharacterized protein" species:9823
"Sus scrofa" [GO:0003729 "mRNA binding" evidence=IEA]
InterPro:IPR026502 GO:GO:0003729 GeneTree:ENSGT00390000008738
PANTHER:PTHR17408 OMA:QQVPKAQ EMBL:CU928408
Ensembl:ENSSSCT00000024036 Uniprot:I3LHJ1
Length = 140
Score = 221 (82.9 bits), Expect = 2.8e-18, P = 2.8e-18
Identities = 40/74 (54%), Positives = 48/74 (64%)
Query: 29 ETDPAILLRRQKQIDFGKNTVGYDRYCSMVKREDRTKD-HPKTPPKELKYSRRAWDGLIK 87
ETD IL RRQKQID+GK T GY + V + R HP+TP K +YSRR+WD I+
Sbjct: 37 ETDKTILQRRQKQIDYGKRTPGYQSFLQQVPKAQRLPGLHPQTPNKNRRYSRRSWDAQIR 96
Query: 88 SWRSRLHFWDPPNE 101
WR LH WDPPN+
Sbjct: 97 QWRRALHSWDPPNQ 110
>UNIPROTKB|F1LKN1 [details] [associations]
symbol:SLBP2 "Stem loop binding protein 2" species:9913
"Bos taurus" [GO:0003729 "mRNA binding" evidence=IEA]
InterPro:IPR026502 GO:GO:0003729 GeneTree:ENSGT00390000008738
PANTHER:PTHR17408 EMBL:DAAA02020398 EMBL:FJ222239 EMBL:JQ812809
EMBL:JQ812810 IPI:IPI01017563 RefSeq:XP_003582469.1
RefSeq:XP_003586348.1 UniGene:Bt.106622 Ensembl:ENSBTAT00000064998
GeneID:100848789 KEGG:bta:100848789 CTD:398091 OMA:QQVPKAQ
Uniprot:F1LKN1
Length = 147
Score = 213 (80.0 bits), Expect = 2.0e-17, P = 2.0e-17
Identities = 38/74 (51%), Positives = 48/74 (64%)
Query: 29 ETDPAILLRRQKQIDFGKNTVGYDRYCSMVKREDRTKD-HPKTPPKELKYSRRAWDGLIK 87
ETD +L RRQKQID+GK T GY + V + R HP+TP K +YSRR+WD I+
Sbjct: 37 ETDATVLQRRQKQIDYGKRTPGYQCFLQQVPKAQRQPGLHPQTPNKNRRYSRRSWDAQIR 96
Query: 88 SWRSRLHFWDPPNE 101
WR LH WDPP++
Sbjct: 97 KWRRALHSWDPPSQ 110
>UNIPROTKB|J9NYP0 [details] [associations]
symbol:LOC474694 "Uncharacterized protein" species:9615
"Canis lupus familiaris" [GO:0003729 "mRNA binding" evidence=IEA]
InterPro:IPR026502 GO:GO:0003729 GeneTree:ENSGT00390000008738
PANTHER:PTHR17408 EMBL:AAEX03007812 Ensembl:ENSCAFT00000048482
Uniprot:J9NYP0
Length = 154
Score = 213 (80.0 bits), Expect = 2.0e-17, P = 2.0e-17
Identities = 38/74 (51%), Positives = 49/74 (66%)
Query: 29 ETDPAILLRRQKQIDFGKNTVGYDRYCSMVKREDRTKD-HPKTPPKELKYSRRAWDGLIK 87
ETD +L RRQKQID+GK T GY + V + R HP+TP K+ +YSRR+WD I+
Sbjct: 37 ETDETVLQRRQKQIDYGKRTPGYQCFLQQVPKAKRQPGLHPQTPNKKRRYSRRSWDAQIR 96
Query: 88 SWRSRLHFWDPPNE 101
WR LH WDPP++
Sbjct: 97 QWRRALHSWDPPSQ 110
>UNIPROTKB|J9PB07 [details] [associations]
symbol:LOC474694 "Uncharacterized protein" species:9615
"Canis lupus familiaris" [GO:0003729 "mRNA binding" evidence=IEA]
InterPro:IPR026502 GO:GO:0003729 GeneTree:ENSGT00390000008738
PANTHER:PTHR17408 EMBL:AAEX03007812 RefSeq:NP_001161817.2
Ensembl:ENSCAFT00000045547 GeneID:474694 KEGG:cfa:474694
Uniprot:J9PB07
Length = 265
Score = 213 (80.0 bits), Expect = 2.0e-17, P = 2.0e-17
Identities = 38/74 (51%), Positives = 49/74 (66%)
Query: 29 ETDPAILLRRQKQIDFGKNTVGYDRYCSMVKREDRTKD-HPKTPPKELKYSRRAWDGLIK 87
ETD +L RRQKQID+GK T GY + V + R HP+TP K+ +YSRR+WD I+
Sbjct: 101 ETDETVLQRRQKQIDYGKRTPGYQCFLQQVPKAKRQPGLHPQTPNKKRRYSRRSWDAQIR 160
Query: 88 SWRSRLHFWDPPNE 101
WR LH WDPP++
Sbjct: 161 QWRRALHSWDPPSQ 174
>ZFIN|ZDB-GENE-070112-1722 [details] [associations]
symbol:zgc:158856 "zgc:158856" species:7955 "Danio
rerio" [GO:0003729 "mRNA binding" evidence=IEA] [GO:0008150
"biological_process" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] InterPro:IPR026502 ZFIN:ZDB-GENE-070112-1722
GO:GO:0003729 eggNOG:NOG278381 GeneTree:ENSGT00390000008738
PANTHER:PTHR17408 EMBL:CT027639 EMBL:CU462984 EMBL:BC129495
IPI:IPI00829287 RefSeq:NP_001073645.1 UniGene:Dr.79802
STRING:A1L2F4 Ensembl:ENSDART00000101051 GeneID:558918
KEGG:dre:558918 InParanoid:A1L2F4 OMA:ILERCIL OrthoDB:EOG4Q2DH8
NextBio:20882691 Uniprot:A1L2F4
Length = 326
Score = 197 (74.4 bits), Expect = 1.7e-15, P = 1.7e-15
Identities = 37/74 (50%), Positives = 46/74 (62%)
Query: 28 YETDPAILLRRQKQIDFGKNTVGYDRYCSMVKREDRTKD-HPKTPPKELKYSRRAWDGLI 86
+E + A+L RRQKQI +GKNT GY Y V + R HP TP K KYSRR+WD +
Sbjct: 128 FEINEAVLKRRQKQIQYGKNTCGYQNYVQQVPKRLRVPGIHPSTPNKYRKYSRRSWDMQV 187
Query: 87 KSWRSRLHFWDPPN 100
+ WR LH WD P+
Sbjct: 188 RLWRRALHAWDLPS 201
>DICTYBASE|DDB_G0277383 [details] [associations]
symbol:DDB_G0277383 species:44689 "Dictyostelium
discoideum" [GO:0003729 "mRNA binding" evidence=IEA]
InterPro:IPR026502 dictyBase:DDB_G0277383 GO:GO:0003729
EMBL:AAFI02000019 eggNOG:NOG278381 PANTHER:PTHR17408
RefSeq:XP_642675.1 EnsemblProtists:DDB0169192 GeneID:8621001
KEGG:ddi:DDB_G0277383 InParanoid:Q75J91 OMA:IDIVENH Uniprot:Q75J91
Length = 496
Score = 179 (68.1 bits), Expect = 6.0e-13, P = 6.0e-13
Identities = 34/66 (51%), Positives = 41/66 (62%)
Query: 29 ETDPAILLRRQKQIDFGKNTVGYDRYCSMVKREDRTKDHPKTPPKELKYSRRAWDGLIKS 88
ETDP L RQ+QID GK T GY Y ++V + R PKTP K S+R+WDG IK
Sbjct: 385 ETDPKRLAARQRQIDIGKMTAGYKNYIALVPKSKRKPTDPKTPNKNQVCSKRSWDGQIKK 444
Query: 89 WRSRLH 94
WR +LH
Sbjct: 445 WRRQLH 450
>WB|WBGene00000411 [details] [associations]
symbol:cdl-1 species:6239 "Caenorhabditis elegans"
[GO:0003729 "mRNA binding" evidence=IEA] [GO:0009792 "embryo
development ending in birth or egg hatching" evidence=IMP]
[GO:0040010 "positive regulation of growth rate" evidence=IMP]
[GO:0002009 "morphogenesis of an epithelium" evidence=IMP]
[GO:0010171 "body morphogenesis" evidence=IMP] [GO:0000003
"reproduction" evidence=IMP] [GO:0040035 "hermaphrodite genitalia
development" evidence=IMP] [GO:0016246 "RNA interference"
evidence=IMP] [GO:0060465 "pharynx development" evidence=IMP]
[GO:0040025 "vulval development" evidence=IMP] [GO:0006915
"apoptotic process" evidence=IMP] [GO:0009790 "embryo development"
evidence=IMP] [GO:0007076 "mitotic chromosome condensation"
evidence=IMP] [GO:0005634 "nucleus" evidence=TAS] [GO:0005737
"cytoplasm" evidence=TAS] [GO:0003730 "mRNA 3'-UTR binding"
evidence=IDA] InterPro:IPR026502 GO:GO:0005634 GO:GO:0009792
GO:GO:0002009 GO:GO:0005737 GO:GO:0040010 GO:GO:0006915
GO:GO:0016246 GO:GO:0006397 GO:GO:0010171 GO:GO:0040035
GO:GO:0003730 GO:GO:0007076 GO:GO:0040025 GO:GO:0060465 EMBL:Z46794
EMBL:Y10114 EMBL:AB060649 PIR:T23983 RefSeq:NP_496320.3
UniGene:Cel.9173 ProteinModelPortal:Q09599 SMR:Q09599 IntAct:Q09599
MINT:MINT-6669894 STRING:Q09599 PaxDb:Q09599
EnsemblMetazoa:R06F6.1.1 EnsemblMetazoa:R06F6.1.2 GeneID:174659
KEGG:cel:CELE_R06F6.1 UCSC:R06F6.1.1 CTD:174659 WormBase:R06F6.1
eggNOG:NOG278381 GeneTree:ENSGT00390000008738 HOGENOM:HOG000016789
InParanoid:Q09599 OMA:AKEKAVY NextBio:884952 PANTHER:PTHR17408
Uniprot:Q09599
Length = 367
Score = 158 (60.7 bits), Expect = 6.1e-11, P = 6.1e-11
Identities = 32/70 (45%), Positives = 42/70 (60%)
Query: 26 LAYETDPAILLRRQKQIDFGKNTVGYDRYCSMVKREDRTK-DHPKTPPKELKYSRRAWDG 84
L + TD A+L RR ++ID K Y RY S V DR K HP+TP K + +SRR+WD
Sbjct: 203 LGWCTDEAVLKRRSREIDRAKEKAVYQRYTSEVPLRDRIKGQHPRTPNKLINFSRRSWDT 262
Query: 85 LIKSWRSRLH 94
IK W+ L+
Sbjct: 263 QIKKWKRSLY 272
>UNIPROTKB|H7C4H8 [details] [associations]
symbol:SLBP "Histone RNA hairpin-binding protein"
species:9606 "Homo sapiens" [GO:0003729 "mRNA binding"
evidence=IEA] InterPro:IPR026502 GO:GO:0003729 EMBL:AC016773
PANTHER:PTHR17408 HGNC:HGNC:10904 ProteinModelPortal:H7C4H8
Ensembl:ENST00000480936 Uniprot:H7C4H8
Length = 186
Score = 147 (56.8 bits), Expect = 2.0e-10, P = 2.0e-10
Identities = 29/51 (56%), Positives = 36/51 (70%)
Query: 28 YETDPAILLRRQKQIDFGKNTVGYDRYCSMVKREDRTKD-HPKTPPKELKY 77
+ETD ++L+RRQKQI++GKNT+ YDRY V R R HPKTP K KY
Sbjct: 136 FETDESVLMRRQKQINYGKNTIAYDRYIKEVPRHLRQPGIHPKTPNKFKKY 186
>RGD|1584682 [details] [associations]
symbol:Slbp "stem-loop binding protein" species:10116 "Rattus
norvegicus" [GO:0003729 "mRNA binding" evidence=IEA;ISO]
[GO:0005634 "nucleus" evidence=ISO] [GO:0005737 "cytoplasm"
evidence=ISO] [GO:0006398 "histone mRNA 3'-end processing"
evidence=ISO] [GO:0030529 "ribonucleoprotein complex" evidence=ISO]
[GO:0033260 "DNA replication involved in S phase" evidence=ISO]
[GO:0033261 "regulation of S phase" evidence=ISO] [GO:0051028 "mRNA
transport" evidence=ISO] [GO:0071204 "histone pre-mRNA 3'end
processing complex" evidence=ISO] [GO:0071207 "histone pre-mRNA
stem-loop binding" evidence=ISO] InterPro:IPR026502 GO:GO:0005737
GO:GO:0003729 GO:GO:0051028 GO:GO:0033261 GO:GO:0006398
GO:GO:0071204 GO:GO:0071207 GO:GO:0033260 PANTHER:PTHR17408
OrthoDB:EOG4J1196 IPI:IPI00188284 Ensembl:ENSRNOT00000023511
ArrayExpress:D4A7V4 Uniprot:D4A7V4
Length = 275
Score = 142 (55.0 bits), Expect = 1.6e-09, P = 1.6e-09
Identities = 24/37 (64%), Positives = 27/37 (72%)
Query: 67 HPKTPPKELKYSRRAWDGLIKSWRSRLHFWDPPNENG 103
HP+TP K KYSRR+WD IK W+ LHFWDPP E G
Sbjct: 168 HPRTPNKFKKYSRRSWDQQIKLWKVALHFWDPPAEEG 204
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.315 0.133 0.424 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 159 125 0.00091 102 3 11 22 0.42 31
29 0.39 33
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 25
No. of states in DFA: 587 (62 KB)
Total size of DFA: 159 KB (2094 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 13.23u 0.05s 13.28t Elapsed: 00:00:11
Total cpu time: 13.24u 0.05s 13.29t Elapsed: 00:00:11
Start: Thu Aug 15 12:29:02 2013 End: Thu Aug 15 12:29:13 2013