Query psy6765
Match_columns 246
No_of_seqs 335 out of 2748
Neff 8.3
Searched_HMMs 29240
Date Fri Aug 16 17:51:28 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy6765.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/6765hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3pm9_A Putative oxidoreductase 99.9 3E-25 1E-29 204.2 13.2 146 23-170 11-157 (476)
2 4bby_A Alkyldihydroxyacetoneph 99.9 1.6E-23 5.3E-28 199.7 15.3 149 19-171 154-316 (658)
3 1wvf_A 4-cresol dehydrogenase 99.9 6.5E-23 2.2E-27 190.8 14.1 141 28-170 19-165 (520)
4 1e8g_A Vanillyl-alcohol oxidas 99.9 3.2E-22 1.1E-26 187.5 16.1 140 28-169 23-180 (560)
5 1f0x_A DLDH, D-lactate dehydro 99.9 3.3E-22 1.1E-26 187.1 14.0 141 27-171 10-157 (571)
6 2uuu_A Alkyldihydroxyacetoneph 99.9 1.7E-21 5.9E-26 183.0 14.8 150 19-171 84-247 (584)
7 1w1o_A Cytokinin dehydrogenase 99.8 1.5E-20 5.1E-25 175.4 12.1 142 26-170 31-180 (534)
8 3tsh_A Pollen allergen PHL P 4 99.8 6.7E-20 2.3E-24 169.7 13.9 133 25-160 7-149 (500)
9 1hsk_A UDP-N-acetylenolpyruvoy 99.8 1.1E-19 3.9E-24 159.5 12.2 127 24-160 13-143 (326)
10 2exr_A Cytokinin dehydrogenase 99.8 4.1E-20 1.4E-24 171.9 9.0 137 25-169 26-172 (524)
11 3pop_A GILR oxidase; FAD bindi 99.8 5.6E-19 1.9E-23 163.3 12.3 118 42-160 11-129 (501)
12 3rja_A Carbohydrate oxidase; p 99.8 2.8E-18 9.5E-23 157.7 13.4 115 44-158 15-131 (473)
13 2ipi_A Aclacinomycin oxidoredu 99.8 2.2E-18 7.4E-23 160.2 12.2 117 44-161 33-151 (521)
14 3tx1_A UDP-N-acetylenolpyruvoy 99.8 1.4E-18 4.9E-23 152.0 10.2 126 25-160 20-149 (322)
15 2wdx_A Putative hexose oxidase 99.8 2.7E-18 9.2E-23 159.6 12.1 111 47-158 38-150 (523)
16 2y3s_A TAML; oxidoreductase; H 99.8 4.4E-18 1.5E-22 158.4 12.9 113 44-157 36-150 (530)
17 2bvf_A 6-hydroxy-D-nicotine ox 99.8 5.1E-18 1.7E-22 155.5 12.4 116 43-160 15-131 (459)
18 4feh_A Oxidoreductase DPRE1; a 99.7 6.9E-18 2.3E-22 155.3 12.9 118 53-172 31-150 (481)
19 3js8_A Cholesterol oxidase; ch 99.7 6.7E-18 2.3E-22 156.2 11.9 121 52-174 16-144 (540)
20 3fw9_A Reticuline oxidase; BI- 99.7 1.2E-17 4E-22 154.2 12.8 103 56-159 36-141 (495)
21 1zr6_A Glucooligosaccharide ox 99.7 7.6E-18 2.6E-22 156.0 10.4 125 30-158 6-135 (503)
22 2i0k_A Oxidoreductase; MIX alp 99.7 1.9E-17 6.3E-22 155.2 12.6 125 47-172 17-148 (561)
23 3vte_A Tetrahydrocannabinolic 99.7 5.2E-17 1.8E-21 150.4 12.4 102 57-159 45-149 (518)
24 2vfr_A Xylitol oxidase, aldito 99.7 4.3E-17 1.5E-21 147.9 10.1 115 56-174 11-125 (422)
25 4bby_A Alkyldihydroxyacetoneph 99.6 3.7E-15 1.3E-19 142.0 9.7 106 133-246 154-273 (658)
26 1uxy_A MURB, uridine diphospho 99.5 2E-14 6.8E-19 126.6 10.2 104 50-159 2-110 (340)
27 3i99_A UDP-N-acetylenolpyruvoy 99.5 6.5E-15 2.2E-19 130.2 6.4 106 48-160 16-127 (357)
28 3tsh_A Pollen allergen PHL P 4 99.5 1.4E-13 4.7E-18 127.3 10.7 98 141-246 9-118 (500)
29 3pm9_A Putative oxidoreductase 99.4 2.5E-13 8.7E-18 124.7 8.7 69 178-246 47-115 (476)
30 3pop_A GILR oxidase; FAD bindi 99.4 3.9E-13 1.3E-17 124.2 9.9 85 152-245 12-96 (501)
31 3fw9_A Reticuline oxidase; BI- 99.4 4.7E-13 1.6E-17 123.5 10.1 87 152-245 17-108 (495)
32 2gqt_A UDP-N-acetylenolpyruvyl 99.4 3E-13 1E-17 115.2 7.3 95 50-160 10-108 (268)
33 3rja_A Carbohydrate oxidase; p 99.4 8.1E-13 2.8E-17 121.3 9.3 95 143-245 3-100 (473)
34 3vte_A Tetrahydrocannabinolic 99.4 1.5E-12 5.2E-17 120.5 10.5 88 151-245 24-116 (518)
35 2wdx_A Putative hexose oxidase 99.4 8.5E-13 2.9E-17 122.6 8.9 86 152-245 34-119 (523)
36 2y3s_A TAML; oxidoreductase; H 99.4 1.7E-12 5.7E-17 120.8 9.8 87 150-245 34-120 (530)
37 2ipi_A Aclacinomycin oxidoredu 99.4 1.2E-12 4.2E-17 121.5 8.8 88 150-245 30-117 (521)
38 1wvf_A 4-cresol dehydrogenase 99.3 1.1E-12 3.7E-17 121.9 7.9 67 179-245 53-121 (520)
39 1f0x_A DLDH, D-lactate dehydro 99.3 1.8E-12 6.1E-17 121.3 9.1 68 178-245 41-113 (571)
40 1zr6_A Glucooligosaccharide ox 99.3 2.4E-12 8.2E-17 119.1 8.7 95 140-243 6-103 (503)
41 1e8g_A Vanillyl-alcohol oxidas 99.3 2.4E-12 8.1E-17 120.6 8.5 68 179-246 67-137 (560)
42 2uuu_A Alkyldihydroxyacetoneph 99.3 2.7E-12 9.2E-17 120.6 8.3 68 179-246 134-204 (584)
43 2bvf_A 6-hydroxy-D-nicotine ox 99.3 5.4E-12 1.9E-16 115.5 8.7 84 152-245 16-99 (459)
44 2exr_A Cytokinin dehydrogenase 99.3 5E-12 1.7E-16 117.5 7.5 64 179-244 58-122 (524)
45 1hsk_A UDP-N-acetylenolpyruvoy 99.2 2.3E-11 7.8E-16 106.6 6.7 70 173-244 39-108 (326)
46 1w1o_A Cytokinin dehydrogenase 99.2 4.6E-11 1.6E-15 111.3 8.8 67 178-245 64-138 (534)
47 4feh_A Oxidoreductase DPRE1; a 99.2 4.9E-11 1.7E-15 109.6 8.3 71 174-245 34-106 (481)
48 3tx1_A UDP-N-acetylenolpyruvoy 99.0 2.1E-10 7E-15 100.2 6.6 71 172-244 44-114 (322)
49 3js8_A Cholesterol oxidase; ch 99.0 2.8E-10 9.4E-15 105.4 7.3 66 178-245 25-96 (540)
50 2i0k_A Oxidoreductase; MIX alp 99.0 3.1E-10 1.1E-14 106.2 6.5 66 178-244 31-101 (561)
51 2vfr_A Xylitol oxidase, aldito 98.9 9.2E-10 3.1E-14 99.6 6.4 64 178-245 16-79 (422)
52 1uxy_A MURB, uridine diphospho 98.9 2.5E-09 8.7E-14 94.0 6.1 71 172-245 4-74 (340)
53 3i99_A UDP-N-acetylenolpyruvoy 98.8 2.2E-09 7.5E-14 94.8 2.8 69 171-243 19-87 (357)
54 2gqt_A UDP-N-acetylenolpyruvyl 98.6 2E-08 7E-13 85.3 4.9 64 172-243 12-75 (268)
55 1ffv_C CUTM, flavoprotein of c 97.2 0.00083 2.8E-08 57.4 7.4 71 66-145 5-83 (287)
56 2yvs_A Glycolate oxidase subun 96.9 0.001 3.6E-08 54.5 5.1 51 123-173 1-51 (219)
57 1n62_C Carbon monoxide dehydro 96.5 0.0054 1.8E-07 52.3 6.8 76 66-145 5-83 (288)
58 3nvz_B Xanthine dehydrogenase/ 96.0 0.013 4.4E-07 50.4 6.5 82 63-148 7-90 (305)
59 2w3s_A Xanthine dehydrogenase; 95.8 0.0082 2.8E-07 54.6 4.8 78 64-149 175-258 (462)
60 3hrd_C Nicotinate dehydrogenas 95.3 0.051 1.8E-06 46.4 7.8 76 66-145 3-82 (296)
61 1t3q_C Quinoline 2-oxidoreduct 95.2 0.043 1.5E-06 46.6 7.1 76 66-145 5-82 (288)
62 1rm6_B 4-hydroxybenzoyl-COA re 92.3 0.37 1.3E-05 41.6 7.4 76 66-146 6-84 (324)
63 1ffv_C CUTM, flavoprotein of c 87.8 0.66 2.2E-05 39.2 5.1 57 183-243 5-66 (287)
64 3unc_A Xanthine dehydrogenase/ 85.8 1 3.5E-05 46.1 6.0 80 64-148 231-313 (1332)
65 1n62_C Carbon monoxide dehydro 73.2 2.4 8.2E-05 35.7 3.3 54 183-239 5-63 (288)
66 1rzw_A Protein AF2095(GR4); be 69.4 8.5 0.00029 28.1 5.1 38 62-99 45-83 (123)
67 1xty_A PTH, peptidyl-tRNA hydr 65.8 11 0.00037 27.3 5.1 38 61-98 50-88 (120)
68 1wn2_A Peptidyl-tRNA hydrolase 65.2 11 0.00038 27.3 5.1 38 62-99 52-90 (121)
69 2w3s_A Xanthine dehydrogenase; 64.8 3.8 0.00013 37.0 3.0 52 184-239 178-234 (462)
70 3dmy_A Protein FDRA; predicted 64.7 81 0.0028 28.4 12.8 89 132-220 117-212 (480)
71 1rlk_A Hypothetical protein TA 64.4 9.1 0.00031 27.6 4.4 38 62-99 48-86 (117)
72 1vkm_A Conserved hypothetical 64.2 12 0.0004 31.5 5.5 107 78-207 109-219 (297)
73 2zv3_A PTH, peptidyl-tRNA hydr 62.2 9 0.00031 27.5 4.1 37 62-98 46-83 (115)
74 3zyv_A AOH1; oxidoreductase, m 58.3 9.6 0.00033 39.0 4.8 78 67-149 241-321 (1335)
75 3ff4_A Uncharacterized protein 54.4 18 0.00063 26.1 4.7 81 131-216 7-92 (122)
76 1yht_A DSPB; beta barrel, hydr 54.0 8.9 0.0003 33.4 3.4 29 73-101 92-122 (367)
77 1y81_A Conserved hypothetical 53.6 62 0.0021 23.5 7.8 78 130-212 16-99 (138)
78 2nu8_A Succinyl-COA ligase [AD 52.8 53 0.0018 27.2 7.9 145 63-218 87-238 (288)
79 2d59_A Hypothetical protein PH 52.7 56 0.0019 23.9 7.3 81 130-215 24-110 (144)
80 3k5i_A Phosphoribosyl-aminoimi 51.7 45 0.0015 28.9 7.6 133 76-213 34-167 (403)
81 1q7s_A BIT1, protein CGI-147; 51.5 20 0.00069 25.7 4.4 36 63-98 49-85 (117)
82 1yht_A DSPB; beta barrel, hydr 49.7 11 0.00039 32.7 3.4 28 191-218 93-122 (367)
83 3hrd_C Nicotinate dehydrogenas 47.3 19 0.00065 30.2 4.3 52 183-237 3-57 (296)
84 2yv1_A Succinyl-COA ligase [AD 46.9 46 0.0016 27.7 6.7 89 125-216 10-105 (294)
85 2yl5_A Beta-N-acetylhexosamini 46.7 13 0.00044 33.2 3.2 29 73-101 92-122 (442)
86 4ex8_A ALNA; alpha/beta/alpha- 46.3 17 0.00058 30.8 3.7 109 78-206 116-228 (316)
87 2yl6_A Beta-N-acetylhexosamini 45.2 12 0.00041 33.3 2.8 29 73-101 89-119 (434)
88 2yl5_A Beta-N-acetylhexosamini 43.8 16 0.00053 32.7 3.3 28 191-218 93-122 (442)
89 1t3q_C Quinoline 2-oxidoreduct 43.4 18 0.0006 30.3 3.4 53 183-239 5-62 (288)
90 2ozl_B PDHE1-B, pyruvate dehyd 43.0 24 0.00082 30.2 4.3 34 64-97 150-184 (341)
91 3nvz_B Xanthine dehydrogenase/ 42.7 12 0.00042 31.5 2.4 54 180-237 7-62 (305)
92 2yl6_A Beta-N-acetylhexosamini 41.9 15 0.0005 32.8 2.8 28 191-218 90-119 (434)
93 2gjx_A Beta-hexosaminidase alp 40.7 18 0.00063 32.8 3.4 29 73-101 212-242 (507)
94 3rcn_A Beta-N-acetylhexosamini 40.2 19 0.00065 33.1 3.4 29 73-101 221-251 (543)
95 4gim_A Pseudouridine-5'-phosph 40.1 34 0.0012 29.2 4.7 111 78-207 136-250 (335)
96 1w85_B Pyruvate dehydrogenase 39.7 29 0.00098 29.3 4.3 86 62-152 136-228 (324)
97 1now_A Beta-hexosaminidase bet 39.4 20 0.00068 32.6 3.4 29 73-101 217-247 (507)
98 1qs0_B 2-oxoisovalerate dehydr 39.3 30 0.001 29.4 4.3 32 63-94 139-171 (338)
99 3q2o_A Phosphoribosylaminoimid 39.3 89 0.003 26.7 7.5 130 77-213 25-154 (389)
100 2egz_A 3-dehydroquinate dehydr 39.2 24 0.00081 28.2 3.5 36 181-216 139-174 (219)
101 3gh5_A HEX1, beta-hexosaminida 38.8 20 0.00068 32.8 3.2 29 73-101 253-283 (525)
102 2gjx_A Beta-hexosaminidase alp 37.8 22 0.00074 32.4 3.4 31 190-220 212-244 (507)
103 1jak_A Beta-N-acetylhexosamini 37.8 22 0.00075 32.4 3.4 30 72-101 227-258 (512)
104 1umd_B E1-beta, 2-OXO acid deh 37.6 35 0.0012 28.8 4.5 84 64-152 139-229 (324)
105 3rcn_A Beta-N-acetylhexosamini 37.3 22 0.00076 32.6 3.4 28 191-218 222-251 (543)
106 1now_A Beta-hexosaminidase bet 36.6 23 0.0008 32.2 3.4 29 191-219 218-248 (507)
107 3gh5_A HEX1, beta-hexosaminida 36.1 24 0.00082 32.3 3.3 28 191-218 254-283 (525)
108 2bfd_B 2-oxoisovalerate dehydr 35.2 37 0.0013 28.9 4.3 33 63-95 155-188 (342)
109 1xty_A PTH, peptidyl-tRNA hydr 35.1 56 0.0019 23.4 4.6 38 179-216 51-89 (120)
110 2kng_A Protein LSR2; DNA-bindi 35.0 10 0.00035 23.5 0.5 23 74-96 11-33 (55)
111 3ozo_A N-acetylglucosaminidase 35.0 26 0.00088 32.5 3.4 30 72-101 252-283 (572)
112 1jak_A Beta-N-acetylhexosamini 34.8 26 0.00088 31.9 3.4 28 191-218 229-258 (512)
113 1wn2_A Peptidyl-tRNA hydrolase 34.7 57 0.002 23.4 4.6 38 179-216 52-90 (121)
114 1ik6_A Pyruvate dehydrogenase; 34.5 39 0.0013 29.2 4.3 82 63-149 185-270 (369)
115 1iuk_A Hypothetical protein TT 34.3 59 0.002 23.7 4.8 78 130-212 15-100 (140)
116 2g2c_A Putative molybdenum cof 34.0 61 0.0021 24.4 5.0 36 184-219 47-82 (167)
117 4evq_A Putative ABC transporte 33.8 44 0.0015 27.8 4.5 147 64-215 81-239 (375)
118 3ced_A Methionine import ATP-b 33.7 57 0.002 22.3 4.3 26 71-96 70-96 (98)
119 2egz_A 3-dehydroquinate dehydr 33.5 31 0.0011 27.5 3.3 34 63-96 138-171 (219)
120 2g2c_A Putative molybdenum cof 33.4 72 0.0025 24.0 5.3 35 67-101 47-81 (167)
121 2epl_X N-acetyl-beta-D-glucosa 32.6 29 0.001 32.5 3.4 30 72-101 141-172 (627)
122 1rzw_A Protein AF2095(GR4); be 32.6 77 0.0026 22.9 5.0 38 180-217 46-84 (123)
123 3ozo_A N-acetylglucosaminidase 32.2 30 0.001 32.0 3.4 29 190-218 253-283 (572)
124 1oi7_A Succinyl-COA synthetase 31.7 53 0.0018 27.3 4.6 88 125-215 4-98 (288)
125 1rlk_A Hypothetical protein TA 31.5 56 0.0019 23.3 4.1 39 179-217 48-87 (117)
126 2epl_X N-acetyl-beta-D-glucosa 31.1 32 0.0011 32.2 3.4 29 190-218 142-172 (627)
127 1mkz_A Molybdenum cofactor bio 30.5 77 0.0026 24.0 5.0 36 184-219 46-82 (172)
128 1mkz_A Molybdenum cofactor bio 30.2 86 0.003 23.7 5.3 35 67-101 46-81 (172)
129 2zv3_A PTH, peptidyl-tRNA hydr 29.3 56 0.0019 23.2 3.7 38 179-216 46-84 (115)
130 3imk_A Putative molybdenum car 28.9 91 0.0031 23.6 4.9 34 62-95 98-134 (158)
131 2pbq_A Molybdenum cofactor bio 28.3 99 0.0034 23.5 5.3 38 182-219 43-81 (178)
132 2is8_A Molybdopterin biosynthe 27.8 94 0.0032 23.2 5.0 36 184-219 39-75 (164)
133 1c7s_A Beta-N-acetylhexosamini 27.7 37 0.0013 33.0 3.2 30 72-101 396-427 (858)
134 3o1n_A 3-dehydroquinate dehydr 27.3 60 0.0021 26.9 4.1 35 182-216 192-231 (276)
135 2ox1_A 3-dehydroquinate dehydr 27.1 65 0.0022 25.1 4.1 32 64-96 119-150 (196)
136 2lnd_A De novo designed protei 26.8 46 0.0016 22.3 2.6 33 186-218 31-63 (112)
137 2pbq_A Molybdenum cofactor bio 26.7 1.2E+02 0.0042 22.9 5.6 37 65-101 43-80 (178)
138 1uuy_A CNX1, molybdopterin bio 26.7 1E+02 0.0035 23.1 5.1 36 184-219 48-84 (167)
139 3rfq_A Pterin-4-alpha-carbinol 26.5 99 0.0034 23.9 5.0 36 184-219 67-102 (185)
140 2ozl_B PDHE1-B, pyruvate dehyd 26.2 68 0.0023 27.3 4.4 31 184-214 154-184 (341)
141 2pjk_A 178AA long hypothetical 26.2 1E+02 0.0034 23.5 5.0 36 184-219 58-94 (178)
142 2ox1_A 3-dehydroquinate dehydr 26.1 63 0.0021 25.2 3.8 37 179-216 117-153 (196)
143 2is8_A Molybdopterin biosynthe 26.0 1.1E+02 0.0039 22.8 5.2 35 67-101 39-74 (164)
144 3m05_A Uncharacterized protein 25.9 22 0.00075 25.5 1.0 33 66-98 9-41 (114)
145 2duw_A Putative COA-binding pr 25.4 1.7E+02 0.0059 21.1 6.1 79 129-212 14-100 (145)
146 1c7s_A Beta-N-acetylhexosamini 25.1 46 0.0016 32.4 3.3 29 190-218 397-427 (858)
147 3pzy_A MOG; ssgcid, seattle st 24.9 96 0.0033 23.3 4.6 35 184-219 45-79 (164)
148 3o1n_A 3-dehydroquinate dehydr 24.9 70 0.0024 26.5 4.1 34 65-98 192-230 (276)
149 1sfl_A 3-dehydroquinate dehydr 24.7 89 0.003 25.1 4.6 37 181-217 157-197 (238)
150 1uuy_A CNX1, molybdopterin bio 24.6 1.2E+02 0.0042 22.6 5.2 35 67-101 48-83 (167)
151 3rfq_A Pterin-4-alpha-carbinol 24.6 1.2E+02 0.0041 23.4 5.2 35 67-101 67-101 (185)
152 2pjk_A 178AA long hypothetical 24.4 1.2E+02 0.004 23.1 5.1 35 67-101 58-93 (178)
153 3iv7_A Alcohol dehydrogenase I 24.3 1.3E+02 0.0045 25.7 5.9 82 131-218 16-101 (364)
154 1y5e_A Molybdenum cofactor bio 24.3 1.2E+02 0.0039 22.8 5.0 36 184-219 49-85 (169)
155 2lbw_A H/ACA ribonucleoprotein 24.2 54 0.0018 23.4 2.9 36 63-98 34-72 (121)
156 1w85_B Pyruvate dehydrogenase 24.1 78 0.0027 26.5 4.4 31 182-212 139-170 (324)
157 3pzy_A MOG; ssgcid, seattle st 24.0 1E+02 0.0035 23.1 4.6 33 68-101 46-78 (164)
158 1qs0_B 2-oxoisovalerate dehydr 24.0 80 0.0027 26.7 4.4 28 184-211 144-171 (338)
159 2yv1_A Succinyl-COA ligase [AD 23.9 2.3E+02 0.008 23.3 7.3 85 132-218 155-243 (294)
160 2o1x_A 1-deoxy-D-xylulose-5-ph 23.7 70 0.0024 29.7 4.3 81 63-148 444-525 (629)
161 3imk_A Putative molybdenum car 23.6 1.1E+02 0.0039 23.1 4.6 35 180-214 99-136 (158)
162 1rm6_B 4-hydroxybenzoyl-COA re 23.2 64 0.0022 27.4 3.6 55 183-243 6-65 (324)
163 1q7s_A BIT1, protein CGI-147; 22.9 1.1E+02 0.0037 21.7 4.3 37 180-216 49-86 (117)
164 3dhx_A Methionine import ATP-b 22.7 1E+02 0.0035 21.2 4.1 28 69-96 69-96 (106)
165 3l84_A Transketolase; TKT, str 22.4 79 0.0027 29.5 4.3 30 67-96 468-497 (632)
166 1sfl_A 3-dehydroquinate dehydr 22.3 1E+02 0.0035 24.7 4.5 35 65-99 158-196 (238)
167 2csu_A 457AA long hypothetical 22.2 2E+02 0.0067 25.5 6.8 83 130-217 10-100 (457)
168 3l9c_A 3-dehydroquinate dehydr 22.1 1.1E+02 0.0037 25.1 4.7 36 181-216 174-214 (259)
169 1jlj_A Gephyrin; globular alph 21.9 1.4E+02 0.0047 23.0 5.0 36 184-219 55-91 (189)
170 2yr1_A 3-dehydroquinate dehydr 21.8 88 0.003 25.5 4.1 36 181-216 171-210 (257)
171 3can_A Pyruvate-formate lyase- 21.6 43 0.0015 25.1 2.0 24 71-94 155-180 (182)
172 4e8j_A Lincosamide resistance 21.5 46 0.0016 25.4 2.1 28 73-101 6-33 (161)
173 1y5e_A Molybdenum cofactor bio 21.5 1.5E+02 0.005 22.2 5.1 35 67-101 49-84 (169)
174 2ohw_A YUEI protein; structura 21.4 1.4E+02 0.0049 21.7 4.8 24 191-214 74-97 (133)
175 4gqr_A Pancreatic alpha-amylas 21.4 63 0.0022 28.2 3.4 22 73-94 74-95 (496)
176 3bzy_B ESCU; auto cleavage pro 20.9 60 0.0021 21.7 2.4 30 64-94 16-45 (83)
177 2bfd_B 2-oxoisovalerate dehydr 20.9 98 0.0034 26.2 4.4 30 182-211 157-187 (342)
178 1umd_B E1-beta, 2-OXO acid deh 20.8 93 0.0032 26.1 4.2 29 184-212 143-171 (324)
179 2o1s_A 1-deoxy-D-xylulose-5-ph 20.8 89 0.003 28.9 4.3 79 63-146 441-521 (621)
180 3v7e_A Ribosome-associated pro 20.4 71 0.0024 21.0 2.7 35 63-97 25-61 (82)
181 1ik6_A Pyruvate dehydrogenase; 20.2 1E+02 0.0036 26.4 4.4 29 184-212 190-218 (369)
No 1
>3pm9_A Putative oxidoreductase; putative D-2-hydroxyglutarate dehydrogenase, putative D-LACT dehydrogenase; HET: FAD; 2.57A {Rhodopseudomonas palustris}
Probab=99.92 E-value=3e-25 Score=204.15 Aligned_cols=146 Identities=30% Similarity=0.425 Sum_probs=133.9
Q ss_pred cCCCHHHHHHHHHhhCCCCCCeecCccccccccccccccCCCCccEEEeCCCHHHHHHHHHHHHhCCCcEEEecCCCCCC
Q psy6765 23 SILNDTHIQKFKQILSNDDNRVLTDEDSVKPYNVDWLKTQEGKSKLVLKPKTTEEVSAILRYCNEQKIAVCPQGGNTGVV 102 (246)
Q Consensus 23 ~~~~~~~~~~L~~~l~~~~~~v~~~~~~~~~~~~~~~~~~~~~p~~vv~P~s~~ev~~~v~~a~~~~i~v~~~GgG~~~~ 102 (246)
+.++.+++++|+++++ ++.+.++++.+..|++||+..+.+.|.+|++|+|++||+++|++|+++++|++++|||||+.
T Consensus 11 ~~~~~~~~~~L~~~lg--~~~v~~~~~~~~~~~~d~~~~~~~~p~~vv~P~s~eeV~~~v~~a~~~~~pv~~~GgGt~~~ 88 (476)
T 3pm9_A 11 VTLSPELIARFTAIVG--DKHALTDPLELEAYITEERNLYRGHSPLVLRPGSTEEVVAICKLANEARVALVPQGGNTGLV 88 (476)
T ss_dssp -CCCHHHHHHHHHHHC--GGGEECSHHHHHHHHBCTTCCCBCCCSCEECCCSHHHHHHHHHHHHHHTCCEEEESSSCCSS
T ss_pred ccCCHHHHHHHHHhcC--CCcEecCHHHHHHHhcccccccCCCCCEEEecCCHHHHHHHHHHHHHcCCeEEEEeCCCCCC
Confidence 4578899999999999 78899998889999999988888999999999999999999999999999999999999999
Q ss_pred CCcccCCCeEEEecCCCCCceeeeCCCCeEEEcCCccHHHHHHHHhhcCceeecCCCch-hHHhhHHhh
Q psy6765 103 AGGVPLYDEVIVSASLMNKILNFDELSGNVNSMSNALVTNRSLELSNTGVVVLGVPLYD-EVIVSASLM 170 (246)
Q Consensus 103 g~~~~~~~gvvidl~~m~~i~~id~~~~~v~v~aG~~~~~l~~~L~~~gl~~~~~p~s~-~~~~~~~~~ 170 (246)
|+++++.+||+|||++||+|+++|+++.+++|+||+++.+|.+++.++|+.||.+|++. ..+.++...
T Consensus 89 g~~~~~~ggvvIdl~~m~~i~~id~~~~~v~V~aGv~~~~l~~~l~~~Gl~~~~~~~s~~~~tvGG~ia 157 (476)
T 3pm9_A 89 GGQTPHNGEVVISLKRMDKIREIDTSSNTITVEAGAILQRVQEKAAEVDRLFPLSLGAQGSCTIGGNLS 157 (476)
T ss_dssp STTCCCSSCEEEECTTCCCEEEEETTTTEEEEETTCBHHHHHHHHHHTTEECCCCCTTTTTCBHHHHHH
T ss_pred CCccCCCCcEEEEeeCCCceEEEcCCCCeEEECCCcCHHHHHHHHHHhCCccCCCCCCCCcEEEccccC
Confidence 99998778999999999999999999999999999999999999999999999998873 455666543
No 2
>4bby_A Alkyldihydroxyacetonephosphate synthase, peroxiso; transferase, plasmalogen, flavin, peroxisome; HET: FAD; 1.90A {Cavia porcellus} PDB: 4bc9_A* 4bca_A* 4bc7_A*
Probab=99.90 E-value=1.6e-23 Score=199.74 Aligned_cols=149 Identities=19% Similarity=0.169 Sum_probs=123.6
Q ss_pred cCcccCCCHHHHHHHHHhhCCCCCCeecCccccccccc-----c----ccccCCCCccEEEeCCCHHHHHHHHHHHHhCC
Q psy6765 19 RGAYSILNDTHIQKFKQILSNDDNRVLTDEDSVKPYNV-----D----WLKTQEGKSKLVLKPKTTEEVSAILRYCNEQK 89 (246)
Q Consensus 19 ~~~~~~~~~~~~~~L~~~l~~~~~~v~~~~~~~~~~~~-----~----~~~~~~~~p~~vv~P~s~~ev~~~v~~a~~~~ 89 (246)
+.+-+.++++++++|+++.+ . +.++.+++..+++ | |++.+...|.+||+|+|++||+++|++|++++
T Consensus 154 ~~p~~~~~~~~~~~l~~~~~--~--~~~~~~~r~~h~~g~s~~d~~~~~~g~~~~~P~aVV~P~s~eeV~~iv~~A~~~~ 229 (658)
T 4bby_A 154 DTPPSIVNEDFLHELKKTNI--S--YSQEADDRVFRAHGHCLHEIFLLREGMFERIPDIVLWPTCHDDVVKIVNLACKYN 229 (658)
T ss_dssp CCCCCCCCHHHHHHHHHHTC--E--EECCHHHHHHTSCCSCHHHHHHHHSSCCSCCCSEEEECCSHHHHHHHHHHHHHTT
T ss_pred cCCCCCCCHHHHHHHHHhcc--c--ccCchHHHhhhcCCCCHHHHHHHhCCcccCCcCEEEeeCCHHHHHHHHHHHHHCC
Confidence 33556788999999999877 3 3445444433332 2 44567889999999999999999999999999
Q ss_pred CcEEEecCCCCCCCCcccC----CCeEEEecCCCCCceeeeCCCCeEEEcCCccHHHHHHHHhhcCceeecCCCc-hhHH
Q psy6765 90 IAVCPQGGNTGVVAGGVPL----YDEVIVSASLMNKILNFDELSGNVNSMSNALVTNRSLELSNTGVVVLGVPLY-DEVI 164 (246)
Q Consensus 90 i~v~~~GgG~~~~g~~~~~----~~gvvidl~~m~~i~~id~~~~~v~v~aG~~~~~l~~~L~~~gl~~~~~p~s-~~~~ 164 (246)
+||+|||||||++||+.+. .++|+|||++||+|++||+++++++|+||+++.+|.++|.++|+.||++|++ ...+
T Consensus 230 ipVvprGgGTsl~GG~~~~~~~~~ggVvLDlsrMnrIleiD~~~~~atVeaGv~~~~L~~~L~~~Gl~lp~dP~S~~~aT 309 (658)
T 4bby_A 230 LCIIPIGGGTSVSYGLMCPADETRTIISLDTSQMNRILWVDENNLTAHVEAGITGQELERQLKESGYCTGHEPDSLEFST 309 (658)
T ss_dssp CEEEEESSCCCSSSTTCCCTTCCSCEEEEECTTCCCEEEEETTTTEEEEETTCBHHHHHHHHHHHTEECCCCCTTTTTCB
T ss_pred CeEEEECCCcCCCCCCCCCCCCCCcEEEEECccCCCcEEEcCCCCEEEEecCchHHHHHHHHHHcCCccCCCCCCccccE
Confidence 9999999999999988763 3479999999999999999999999999999999999999999999999987 4445
Q ss_pred hhHHhhh
Q psy6765 165 VSASLMN 171 (246)
Q Consensus 165 ~~~~~~~ 171 (246)
.++...+
T Consensus 310 IGG~iAt 316 (658)
T 4bby_A 310 VGGWIST 316 (658)
T ss_dssp HHHHHHH
T ss_pred Eeehhhc
Confidence 5655433
No 3
>1wvf_A 4-cresol dehydrogenase [hydroxylating] flavoprote subunit; flavoprotein, electron-transfer, FAD, oxidoreductase; HET: FAD; 1.30A {Pseudomonas putida} SCOP: d.58.32.1 d.145.1.1 PDB: 1wve_A* 1dii_A* 1diq_A*
Probab=99.89 E-value=6.5e-23 Score=190.76 Aligned_cols=141 Identities=21% Similarity=0.274 Sum_probs=123.6
Q ss_pred HHHHHHHHhhCCCCCCeecCcccccccccccccc--CCCCccEEEeCCCHHHHHHHHHHHHhCCCcEEEecCCCCCC-CC
Q psy6765 28 THIQKFKQILSNDDNRVLTDEDSVKPYNVDWLKT--QEGKSKLVLKPKTTEEVSAILRYCNEQKIAVCPQGGNTGVV-AG 104 (246)
Q Consensus 28 ~~~~~L~~~l~~~~~~v~~~~~~~~~~~~~~~~~--~~~~p~~vv~P~s~~ev~~~v~~a~~~~i~v~~~GgG~~~~-g~ 104 (246)
+++++|+++++ ++.|.+++..+..|.+||+.. +.+.|.+|++|+|++||+++|++|+++++||+++|+|||+. |+
T Consensus 19 ~~~~~L~~~l~--~~~v~~~~~~~~~y~~d~~~~~~~~~~p~~vv~P~s~~ev~~~v~~a~~~~~pv~~~g~G~~~~~g~ 96 (520)
T 1wvf_A 19 KAVQKFRALLG--DDNVLVESDQLVPYNKIMMPVENAAHAPSAAVTATTVEQVQGVVKICNEHKIPIWTISTGRNFGYGS 96 (520)
T ss_dssp HHHHHHHHHHC--GGGEECSHHHHHHHHCCCSSSCGGGGCCSEEEECCSHHHHHHHHHHHHHHTCCEEEESSCCCTTTTT
T ss_pred HHHHHHHHhcC--CCeEecCcHHHHHHhcccccccccCCCCCEEEecCCHHHHHHHHHHHHHCCCcEEEEcCCCCCCCCC
Confidence 46788999999 678999988888899998764 67889999999999999999999999999999999999997 76
Q ss_pred ccc-CCCeEEEecCCCCCceeeeCCCCeEEEcCCccHHHHHHHHhhcCceeecC--CCchhHHhhHHhh
Q psy6765 105 GVP-LYDEVIVSASLMNKILNFDELSGNVNSMSNALVTNRSLELSNTGVVVLGV--PLYDEVIVSASLM 170 (246)
Q Consensus 105 ~~~-~~~gvvidl~~m~~i~~id~~~~~v~v~aG~~~~~l~~~L~~~gl~~~~~--p~s~~~~~~~~~~ 170 (246)
+.+ ..+||+|||++||+|+++|+++.+++|+||+++.+|.+++.++|+.++++ |++...+.++...
T Consensus 97 ~~~~~~~gvvidl~~m~~i~~id~~~~~v~v~aGv~~~~l~~~l~~~Gl~~~~~~~p~~~~~~igG~~~ 165 (520)
T 1wvf_A 97 AAPVQRGQVILDLKKMNKIIKIDPEMCYALVEPGVTFGQMYDYIQENNLPVMLSFSAPSAIAGPVGNTM 165 (520)
T ss_dssp TSCSSTTCEEEECTTCCCEEEEETTTTEEEECTTCCHHHHHHHHHHTTCSEECCCCSSCTTCCHHHHHH
T ss_pred CCCCCCCeEEEECCCCCceEEECCCCCEEEECCCCCHHHHHHHHHHcCCcccCCCCCCCCeeeeeeccc
Confidence 665 45799999999999999999999999999999999999999999999987 6554444555433
No 4
>1e8g_A Vanillyl-alcohol oxidase; oxidoreductase, flavoenzyme, specificity; HET: FAD FCR; 2.1A {Penicillium simplicissimum} SCOP: d.58.32.1 d.145.1.1 PDB: 1e8f_A* 1e8h_A* 1qlt_A* 1qlu_A* 1vao_A* 1ahv_A* 1ahz_A* 1ahu_A* 2vao_A* 1w1j_A* 1dzn_A* 1w1l_A* 1e0y_A* 1w1k_A* 1w1m_A*
Probab=99.88 E-value=3.2e-22 Score=187.51 Aligned_cols=140 Identities=13% Similarity=0.091 Sum_probs=117.2
Q ss_pred HHHHHHHHhhCCCCCCeecCcccccc----cccc------ccc--cCCCCccEEEeCCCHHHHHHHHHHHHhCCCcEEEe
Q psy6765 28 THIQKFKQILSNDDNRVLTDEDSVKP----YNVD------WLK--TQEGKSKLVLKPKTTEEVSAILRYCNEQKIAVCPQ 95 (246)
Q Consensus 28 ~~~~~L~~~l~~~~~~v~~~~~~~~~----~~~~------~~~--~~~~~p~~vv~P~s~~ev~~~v~~a~~~~i~v~~~ 95 (246)
+++++|++++| +++|.+++..+.. |.+| |.. .+.+.|.+||+|+|++||+++|++|+++++||++|
T Consensus 23 ~~~~~L~~~~g--~~~v~~d~~~~~~~~~~y~~d~~~~d~~~~~~~~~~~p~~Vv~P~s~~eV~~iv~~a~~~~~pv~~~ 100 (560)
T 1e8g_A 23 EFIQDIIRIVG--SENVEVISSKDQIVDGSYMKPTHTHDPTHVMDQDYFLASAIVAPRNVADVQSIVGLANKFSFPLWPI 100 (560)
T ss_dssp HHHHHHHHHHC--GGGEEECC-----CCBCSSSBCSSSCSSCCSCTTSSCCSEEECCSSHHHHHHHHHHHHHHTCCEEEE
T ss_pred HHHHHHHHhhC--cccEecCHHHhhhhhhhhccccccccccccccccccCCcEEEeCCCHHHHHHHHHHHHHcCCcEEEe
Confidence 36788999999 7889999888877 8776 543 36788999999999999999999999999999999
Q ss_pred cCCCCCC-CCccc-CCCeEEEec-CCCCCceeeeCCCCeEEEcCCccHHHHHHHHhhcCce--eecCCCc-hhHHhhHHh
Q psy6765 96 GGNTGVV-AGGVP-LYDEVIVSA-SLMNKILNFDELSGNVNSMSNALVTNRSLELSNTGVV--VLGVPLY-DEVIVSASL 169 (246)
Q Consensus 96 GgG~~~~-g~~~~-~~~gvvidl-~~m~~i~~id~~~~~v~v~aG~~~~~l~~~L~~~gl~--~~~~p~s-~~~~~~~~~ 169 (246)
|+|||+. |+..| ..+||+||| ++||+|+++|+++.+++|+||+++.+|.++|.++|+. ++++|.+ ...+.++..
T Consensus 101 g~Gt~~~~gg~~p~~~~gvvidl~~~mn~il~id~~~~~v~v~aGv~~~~l~~~l~~~Gl~~~~~~~p~~~~~~tigG~~ 180 (560)
T 1e8g_A 101 SIGRNSGYGGAAPRVSGSVVLDMGKNMNRVLEVNVEGAYCVVEPGVTYHDLHNYLEANNLRDKLWLDVPDLGGGSVLGNA 180 (560)
T ss_dssp SSCCCTTTTTTCCSSTTCEEEECTTTCCCEEEEETTTTEEEECTTCBHHHHHHHHHHTTCTTTEECCCCSSTTSBHHHHH
T ss_pred cCCCcCCcCCCCCCcCCEEEEEchHhcCCeEEEcCCCCEEEEeCCCCHHHHHHHHHHcCCccccCCCCCCCCccchhhhc
Confidence 9999997 87776 467999999 9999999999999999999999999999999999999 9877654 233444443
No 5
>1f0x_A DLDH, D-lactate dehydrogenase; oxidoreductase; HET: FAD; 1.90A {Escherichia coli} SCOP: d.58.32.2 d.145.1.1
Probab=99.88 E-value=3.3e-22 Score=187.08 Aligned_cols=141 Identities=18% Similarity=0.258 Sum_probs=124.4
Q ss_pred HHHHHHHHHhhCCCCCCeecCccccccccccccccCCCCccEEEeCCCHHHHHHHHHHHHhCCCcEEEecCCCCCCCCcc
Q psy6765 27 DTHIQKFKQILSNDDNRVLTDEDSVKPYNVDWLKTQEGKSKLVLKPKTTEEVSAILRYCNEQKIAVCPQGGNTGVVAGGV 106 (246)
Q Consensus 27 ~~~~~~L~~~l~~~~~~v~~~~~~~~~~~~~~~~~~~~~p~~vv~P~s~~ev~~~v~~a~~~~i~v~~~GgG~~~~g~~~ 106 (246)
.+++++|+++++ ...|.+++..+..|++||+ .+.+.|.+||+|+|++||+++|++|+++++||+++|||||+.|+++
T Consensus 10 ~~~~~~L~~~~g--~~~v~~~~~~~~~y~~d~~-~~~~~p~~Vv~P~s~~eV~~iv~~a~~~~~~v~~~GgGt~~~G~~~ 86 (571)
T 1f0x_A 10 KAFLNELARLVG--SSHLLTDPAKTARYRKGFR-SGQGDALAVVFPGSLLELWRVLKACVTADKIILMQAANTGLTEGST 86 (571)
T ss_dssp HHHHHHHHHHHC--GGGEECCHHHHHHHHBCSS-SCBBCCSEEECCSSHHHHHHHHHHHHHTTCEEEEESSCCCSSSTTS
T ss_pred HHHHHHHHHhcC--CCeEEcCHHHHHHHhcccc-ccCCCccEEEeeCCHHHHHHHHHHHHHcCCCEEEECCCcCCCCCcc
Confidence 467899999999 6789998878889999998 5678999999999999999999999999999999999999999998
Q ss_pred cCCC-----eEEEecCCCCCceeeeCCCCeEEEcCCccHHHHHHHHhhcCceeecCCCch--hHHhhHHhhh
Q psy6765 107 PLYD-----EVIVSASLMNKILNFDELSGNVNSMSNALVTNRSLELSNTGVVVLGVPLYD--EVIVSASLMN 171 (246)
Q Consensus 107 ~~~~-----gvvidl~~m~~i~~id~~~~~v~v~aG~~~~~l~~~L~~~gl~~~~~p~s~--~~~~~~~~~~ 171 (246)
+.++ +|+|||++||+|+++|+ +.+++|+||+++.+|.++|.++|+.+|.+|++. ..+.++....
T Consensus 87 ~~~~~~~r~gvvIdl~rmn~I~~id~-~~~v~v~aGv~l~~L~~~l~~~Gl~~p~~~g~s~~~~tvGG~ia~ 157 (571)
T 1f0x_A 87 PNGNDYDRDVVIISTLRLDKLHVLGK-GEQVLAYPGTTLYSLEKALKPLGREPHSVIGSSCIGASVIGGICN 157 (571)
T ss_dssp CCBSCCSSCEEEEECTTCCCEEEETT-TTEEEECTTCBHHHHHHHHGGGTEECSCCCGGGGGTCBHHHHHHT
T ss_pred CCCcCCcCceEEEECcccCCceeECC-CCeEEEcCCcCHHHHHHHHHhcCccCCcCCCccCCCceecccccC
Confidence 8653 89999999999989995 578999999999999999999999998888653 3355555544
No 6
>2uuu_A Alkyldihydroxyacetonephosphate synthase; transferase, lavoprotein, lipid synthesis, peroxisomal disor; HET: FAD PL3; 1.95A {Dictyostelium discoideum} PDB: 2uuv_A*
Probab=99.86 E-value=1.7e-21 Score=183.02 Aligned_cols=150 Identities=15% Similarity=0.200 Sum_probs=127.1
Q ss_pred cCcccCCCHHHHHHHHHhh-CCCCCCeecCcccccccccc-----cc----ccCCCCccEEEeCCCHHHHHHHHHHHHhC
Q psy6765 19 RGAYSILNDTHIQKFKQIL-SNDDNRVLTDEDSVKPYNVD-----WL----KTQEGKSKLVLKPKTTEEVSAILRYCNEQ 88 (246)
Q Consensus 19 ~~~~~~~~~~~~~~L~~~l-~~~~~~v~~~~~~~~~~~~~-----~~----~~~~~~p~~vv~P~s~~ev~~~v~~a~~~ 88 (246)
+.+-+.++.+++++|++++ | ++|.+++..+..|++| |+ ..+...|.+|++|+|++||+++|++|+++
T Consensus 84 ~~p~~~~~~~~~~~L~~~l~g---~~v~~~~~~~~~y~~d~~~~~~~~~~~g~~~~~p~~vv~P~s~eeV~~iv~~a~~~ 160 (584)
T 2uuu_A 84 HVDPPKQYPEFVRELKAFFLP---DQLKDDKLARITHTFGKSLRDLIRVRIGQVKNAPDLIVLPHSHEEVERLVQLAHKY 160 (584)
T ss_dssp CCCCCCCCHHHHHHHHTTSCG---GGEECSHHHHHHTTCCSSHHHHHHHHTTCCCCCCSEEECCCSHHHHHHHHHHHHHH
T ss_pred cCCCCcCCHHHHHHHHhhcCC---CeEEECHHHHHHhccCCchhhhhhhccCccCCCCCEEEeCCCHHHHHHHHHHHHHc
Confidence 4456678889999999999 6 5688887776666643 22 12456899999999999999999999999
Q ss_pred CCcEEEecCCCCCCCCcccC---CCeEEEecCCCCCceeeeCCCCeEEEcCCccHHHHHHHHhhcCceeecCCCc-hhHH
Q psy6765 89 KIAVCPQGGNTGVVAGGVPL---YDEVIVSASLMNKILNFDELSGNVNSMSNALVTNRSLELSNTGVVVLGVPLY-DEVI 164 (246)
Q Consensus 89 ~i~v~~~GgG~~~~g~~~~~---~~gvvidl~~m~~i~~id~~~~~v~v~aG~~~~~l~~~L~~~gl~~~~~p~s-~~~~ 164 (246)
++||+++|||||+.|++++. +++|+|||++||+|+++|+++.+++|+||+++.+|.++|.++|+.++++|++ ...+
T Consensus 161 ~~pv~~~GgGts~~gg~~~~~~~~g~vvidl~~mn~I~~id~~~~~v~v~aGv~~~~l~~~l~~~Gl~~~~~p~s~~~~t 240 (584)
T 2uuu_A 161 NVVIIPMGGGSNIVGAIEPVSNERFTVSIDMRRMNKVLWVDRREMTACIQVGIMGPELEKQLHKQGVSLGHDPDSFEFST 240 (584)
T ss_dssp TCEEEEESSCCCSSCTTSCCCCSSCEEEEECTTCCCEEEEETTTTEEEEETTCBHHHHHHHHHHTTEECCCCCTTGGGCB
T ss_pred CCeEEEEeCCCCCCCCCcccCCCCCEEEEECCCCCccEEEcCCCCEEEECCCCcHHHHHHHHHHcCCeeCcCCCccCCee
Confidence 99999999999999998875 4689999999999989999999999999999999999999999999999985 4455
Q ss_pred hhHHhhh
Q psy6765 165 VSASLMN 171 (246)
Q Consensus 165 ~~~~~~~ 171 (246)
.++....
T Consensus 241 vGG~ia~ 247 (584)
T 2uuu_A 241 LGGWLAT 247 (584)
T ss_dssp HHHHHHH
T ss_pred EeeeccC
Confidence 6665443
No 7
>1w1o_A Cytokinin dehydrogenase 1; flavin, oxidoreductase, flavoprotein, FAD; HET: NAG FAD; 1.7A {Zea mays} SCOP: d.58.32.4 d.145.1.1 PDB: 1w1q_A* 1w1r_A* 1w1s_A* 3dq0_A* 2qkn_A* 3c0p_A* 3bw7_A* 2qpm_A* 3kjm_A*
Probab=99.83 E-value=1.5e-20 Score=175.40 Aligned_cols=142 Identities=15% Similarity=0.169 Sum_probs=114.1
Q ss_pred CHHHHHHHHHhhCCCCCCeecCccccccccccccccCCCCccEEEeCCCHHHHHHHHHHHHh--C-CCcEEEecCCCCCC
Q psy6765 26 NDTHIQKFKQILSNDDNRVLTDEDSVKPYNVDWLKTQEGKSKLVLKPKTTEEVSAILRYCNE--Q-KIAVCPQGGNTGVV 102 (246)
Q Consensus 26 ~~~~~~~L~~~l~~~~~~v~~~~~~~~~~~~~~~~~~~~~p~~vv~P~s~~ev~~~v~~a~~--~-~i~v~~~GgG~~~~ 102 (246)
+..++++|+++.. ++.+.+++..+..|.+||+..+.+.|.+|++|+|++||+++|++|++ + ++|++++|+|||+.
T Consensus 31 ~~~~~~~l~~~~~--~~~v~~~~~~~~~~~~d~~~~~~~~p~~vv~P~s~~ev~~~v~~a~~~~~~~~~v~~~G~G~~~~ 108 (534)
T 1w1o_A 31 GRPWPASLAALAL--DGKLRTDSNATAAASTDFGNITSALPAAVLYPSSTGDLVALLSAANSTPGWPYTIAFRGRGHSLM 108 (534)
T ss_dssp ---------CTTT--TTCEECSHHHHHHTSCCTTCSCCCCCSEEECCSSHHHHHHHHHHHHHCTTCCCCEEEESSCCCSS
T ss_pred hHHHHHHHHhcCC--CceEecCHHHHHHHhccccccccCCCCEEEecCCHHHHHHHHHHHHhcCCCCceEEEECCCCCCC
Confidence 4467788888555 47899988888899999988888999999999999999999999998 6 99999999999999
Q ss_pred CCcccCCCeEEEecCCCCCc-----eeeeCCCCeEEEcCCccHHHHHHHHhhcCceeecCCCchhHHhhHHhh
Q psy6765 103 AGGVPLYDEVIVSASLMNKI-----LNFDELSGNVNSMSNALVTNRSLELSNTGVVVLGVPLYDEVIVSASLM 170 (246)
Q Consensus 103 g~~~~~~~gvvidl~~m~~i-----~~id~~~~~v~v~aG~~~~~l~~~L~~~gl~~~~~p~s~~~~~~~~~~ 170 (246)
|+..+. +|++|||++||+| +++|+++.+++|++|+++.++.+++.++|+..+..++....+.++...
T Consensus 109 g~~~~~-~gvvi~l~~m~~i~~~~~~~~d~~~~~v~v~aGv~~~~l~~~~~~~Gl~~~~~~~~~~~tvGG~v~ 180 (534)
T 1w1o_A 109 GQAFAP-GGVVVNMASLGDAAAPPRINVSADGRYVDAGGEQVWIDVLRASLARGVAPRSWTDYLYLTVGGTLS 180 (534)
T ss_dssp STTCCT-TSEEEEGGGGGCSSSSCSEEECTTSSEEEEETTCBHHHHHHHHHTTTEEESCCCSSCCSBHHHHHT
T ss_pred CCcCCC-CeEEEECccccccccCccEEEcCCCCEEEECCCcCHHHHHHHHHHCCCcccCCCCCCCEEeceecc
Confidence 887764 6899999999998 799988899999999999999999999999644444333444455443
No 8
>3tsh_A Pollen allergen PHL P 4; flavoprotein, BI-covalent flavinylation, oxidoreductase, Glu dehydrogenase, N-glycosylation, allergy, dehydrogenase; HET: FDA; 1.90A {Phleum pratense} PDB: 3tsj_A*
Probab=99.82 E-value=6.7e-20 Score=169.72 Aligned_cols=133 Identities=7% Similarity=0.036 Sum_probs=107.6
Q ss_pred CCHHHHHHHHHhhCCCCCCeecCccc-c----cccc--ccccccCCCCccEEEeCCCHHHHHHHHHHHHhCCCcEEEecC
Q psy6765 25 LNDTHIQKFKQILSNDDNRVLTDEDS-V----KPYN--VDWLKTQEGKSKLVLKPKTTEEVSAILRYCNEQKIAVCPQGG 97 (246)
Q Consensus 25 ~~~~~~~~L~~~l~~~~~~v~~~~~~-~----~~~~--~~~~~~~~~~p~~vv~P~s~~ev~~~v~~a~~~~i~v~~~Gg 97 (246)
..+++++.|.+.++ +..|+++... + ..|. ..|+.....+|.+||+|+|++||+++|++|+++++||++|||
T Consensus 7 ~~~~f~~~L~~~~~--~~~v~~~~~~~y~~~~~~~~~n~rw~~~~~~~P~~vv~p~~~~~v~~~v~~a~~~~~~~~~r~g 84 (500)
T 3tsh_A 7 AKEDFLGCLVKEIP--PRLLYAKSSPAYPSVLGQTIRNSRWSSPDNVKPLYIITPTQVSHIQSAVVCGRRHSVRIRVRSG 84 (500)
T ss_dssp --CHHHHHHHHHSC--GGGEEETTSTTHHHHHHTTCCCTTTTSTTSCCCSEEECCSSHHHHHHHHHHHHHTTCEEEEESS
T ss_pred cHHHHHHHHHhhCC--CCEEECCCCCccHHHHHhhhccccccCCCCCCceEEEEcCCHHHHHHHHHHHHHCCCcEEEEcC
Confidence 34678899999998 6777765332 2 2222 237766778999999999999999999999999999999999
Q ss_pred CCCCCCCcc---cCCCeEEEecCCCCCceeeeCCCCeEEEcCCccHHHHHHHHhhcCceeecCCCc
Q psy6765 98 NTGVVAGGV---PLYDEVIVSASLMNKILNFDELSGNVNSMSNALVTNRSLELSNTGVVVLGVPLY 160 (246)
Q Consensus 98 G~~~~g~~~---~~~~gvvidl~~m~~i~~id~~~~~v~v~aG~~~~~l~~~L~~~gl~~~~~p~s 160 (246)
||++.|.+. ..++|++|||++||+| ++|+++++++|++|+++.++.++|.++|..+...++.
T Consensus 85 Gh~~~g~s~~~~~~~~~~~idl~~~~~v-~~d~~~~~~~v~~G~~~~~~~~~l~~~g~~~~~~~g~ 149 (500)
T 3tsh_A 85 GHDYEGLSYRSLQPETFAVVDLNKMRAV-WVDGKARTAWVDSGAQLGELYYAIYKASPTLAFPAGV 149 (500)
T ss_dssp CCCTTCTTTCCSSSCCEEEEECTTCCCE-EEETTTTEEEEETTSBHHHHHHHHHHHCTTEECCCCS
T ss_pred CcCCCCCcCCCCCcCCeEEEECcCCCCE-EECCCCCEEEEccCcCHHHHHHHHHHhCCCcccCCCC
Confidence 999877543 3467999999999997 9999999999999999999999999988655444433
No 9
>1hsk_A UDP-N-acetylenolpyruvoylglucosamine reductase; peptidoglycan synthesis, cell WALL, cell division, oxidoreductase, NADP, flavoprotein, FAD; HET: FAD; 2.30A {Staphylococcus aureus} SCOP: d.145.1.2 d.146.1.1
Probab=99.81 E-value=1.1e-19 Score=159.54 Aligned_cols=127 Identities=17% Similarity=0.361 Sum_probs=110.8
Q ss_pred CCCHHHHHHHHHhhCCCCCCeecCccccccccccccccCCCCccEEEeCCCHHHHHHHHHHHHhCCCcEEEecCCCCCCC
Q psy6765 24 ILNDTHIQKFKQILSNDDNRVLTDEDSVKPYNVDWLKTQEGKSKLVLKPKTTEEVSAILRYCNEQKIAVCPQGGNTGVVA 103 (246)
Q Consensus 24 ~~~~~~~~~L~~~l~~~~~~v~~~~~~~~~~~~~~~~~~~~~p~~vv~P~s~~ev~~~v~~a~~~~i~v~~~GgG~~~~g 103 (246)
.++.+++++|+++++ +..+.+ ++.+..|++ +.+++.|.+|++|+|++||+++|++|+++++|+.++|||||+.+
T Consensus 13 ~~~~~~~~~l~~~l~--~~~v~~-~~~l~~~~t---~~~~~~p~~vv~P~s~eev~~~l~~a~~~~~pv~~~GgGtnl~~ 86 (326)
T 1hsk_A 13 PINKDIYQALQQLIP--NEKIKV-DEPLKRYTY---TKTGGNADFYITPTKNEEVQAVVKYAYQNEIPVTYLGNGSNIII 86 (326)
T ss_dssp --CHHHHHHHHHHSC--GGGEEE-EEEGGGTCT---TSCCCEEEEEECCSSHHHHHHHHHHHHHTTCCEEEESSCSSEEE
T ss_pred cchHHHHHHHHHhcC--ccceec-CcchHHhcc---CCcCCcceEEEEcCCHHHHHHHHHHHHHcCCCEEEECCCCcccc
Confidence 467788999999999 667777 667888873 35688999999999999999999999999999999999999977
Q ss_pred CcccCCCeEEEecCCCCCceeeeCCCCeEEEcCCccHHHHHHHHhhcCc----eeecCCCc
Q psy6765 104 GGVPLYDEVIVSASLMNKILNFDELSGNVNSMSNALVTNRSLELSNTGV----VVLGVPLY 160 (246)
Q Consensus 104 ~~~~~~~gvvidl~~m~~i~~id~~~~~v~v~aG~~~~~l~~~L~~~gl----~~~~~p~s 160 (246)
+..+. +|++|||++||+| ++|. .+++|+||+++.+|.+++.++|+ +++++|++
T Consensus 87 ~~~~~-~gvvI~l~~m~~i-~id~--~~v~v~aGv~~~~l~~~l~~~Gl~gLe~~~~~Pgt 143 (326)
T 1hsk_A 87 REGGI-RGIVISLLSLDHI-EVSD--DAIIAGSGAAIIDVSRVARDYALTGLEFACGIPGS 143 (326)
T ss_dssp CTTCE-EEEEEECTTCCCE-EEET--TEEEEETTSBHHHHHHHHHHTTEESCGGGTTCCSB
T ss_pred CCCCC-CeEEEEeCCCCce-EEcC--CEEEEeCCCcHHHHHHHHHHCCCccccccCCCcch
Confidence 65544 5899999999998 8873 68999999999999999999999 88989974
No 10
>2exr_A Cytokinin dehydrogenase 7; AT5G21482.1, cytokinin oxidase/dehydrogenase, CKX, structura genomics, protein structure initiative; HET: MSE FAD; 1.70A {Arabidopsis thaliana} PDB: 2q4w_A*
Probab=99.81 E-value=4.1e-20 Score=171.94 Aligned_cols=137 Identities=15% Similarity=0.157 Sum_probs=108.0
Q ss_pred CCHHHHHHHHHhhCCCCCCeecCccccccccccccccCCCCccEEEeCCCHHHHHHHHHHHHh-CCCcEEEecCCCCCCC
Q psy6765 25 LNDTHIQKFKQILSNDDNRVLTDEDSVKPYNVDWLKTQEGKSKLVLKPKTTEEVSAILRYCNE-QKIAVCPQGGNTGVVA 103 (246)
Q Consensus 25 ~~~~~~~~L~~~l~~~~~~v~~~~~~~~~~~~~~~~~~~~~p~~vv~P~s~~ev~~~v~~a~~-~~i~v~~~GgG~~~~g 103 (246)
+...++++|+ +. +.|.+++..+..|.+||+..+.+.|.+|++|+|++||+++|++|++ +++||++||||||+.|
T Consensus 26 ~~~~~~~~l~--~~---~~v~~d~~~~~~~~~d~~~~~~~~P~~vv~P~s~eeV~~iv~~a~~~~~~~v~~~GgGts~~g 100 (524)
T 2exr_A 26 STDGVSESLN--IQ---GEILCGGAAADIAGRDFGGMNCVKPLAVVRPVGPEDIAGAVKAALRSDKLTVAARGNGHSING 100 (524)
T ss_dssp --------CC--CS---SEEECSHHHHHHHTCCTTCCCCCCCSEEEECSSHHHHHHHHHHHHHSSSCCEEEESSSCCSSS
T ss_pred cHHHHHHhcC--CC---CeEEeCHHHHHHHhccccccccCCCCEEEecCCHHHHHHHHHHHHhhcCceEEEECCCcCCCC
Confidence 3445566666 34 6788888888999999987788999999999999999999999996 9999999999999998
Q ss_pred CcccCCCeEEEecCCCCCceeeeC-----CC--CeEEEcCCccHHHH-HHHHhhcCceeecCCCc-hhHHhhHHh
Q psy6765 104 GGVPLYDEVIVSASLMNKILNFDE-----LS--GNVNSMSNALVTNR-SLELSNTGVVVLGVPLY-DEVIVSASL 169 (246)
Q Consensus 104 ~~~~~~~gvvidl~~m~~i~~id~-----~~--~~v~v~aG~~~~~l-~~~L~~~gl~~~~~p~s-~~~~~~~~~ 169 (246)
++.+. +||+|||++||+| ++|+ ++ .+++|++|+++.++ ...+.++|+. |.++.+ ...+.++..
T Consensus 101 ~~~~~-~gvvidl~~m~~i-~i~~~~~~~~~~~~~v~v~aGv~~~~l~~~~l~~~Gl~-~~~~~s~~~~tiGG~v 172 (524)
T 2exr_A 101 QAMAE-GGLVVDMSTTAEN-HFEVGYLSGGDATAFVDVSGGALWEDVLKRCVSEYGLA-PRSWTDYLGLTVGGTL 172 (524)
T ss_dssp TTCCT-TSEEEEGGGGTTS-CEEEEECCSSSSSEEEEEETTCBHHHHHHHHHHHHSEE-CSCCCSCCSSBHHHHH
T ss_pred cccCC-CEEEEECcCCCCc-EEeecccCCCCCceEEEEeCCcCHHHHHHHHHHHcCCC-CCCCCcCCceeecccC
Confidence 88765 7899999999999 8887 55 79999999999997 4556589998 555543 334445444
No 11
>3pop_A GILR oxidase; FAD binding protein, gilvocarcin, gilvocarcin biosynthesis, covalently bound FAD, oxidoreductase; HET: FAD; 1.65A {Streptomyces griseoflavus} PDB: 3pqb_A*
Probab=99.79 E-value=5.6e-19 Score=163.25 Aligned_cols=118 Identities=12% Similarity=-0.048 Sum_probs=103.5
Q ss_pred CCeecCccccccccccccccCCCCccEEEeCCCHHHHHHHHHHHHhCCCcEEEecCCCCCCCCcccCCCeEEEecCCCCC
Q psy6765 42 NRVLTDEDSVKPYNVDWLKTQEGKSKLVLKPKTTEEVSAILRYCNEQKIAVCPQGGNTGVVAGGVPLYDEVIVSASLMNK 121 (246)
Q Consensus 42 ~~v~~~~~~~~~~~~~~~~~~~~~p~~vv~P~s~~ev~~~v~~a~~~~i~v~~~GgG~~~~g~~~~~~~gvvidl~~m~~ 121 (246)
..+...+..+......|+.++...|.+|++|+|++||+++|++|+++++||.+|||||++.|.+.+.++|++|||++||+
T Consensus 11 ~~~~p~~~~y~~~~~~~n~~~~~~P~~vv~P~s~~dV~~~v~~a~~~~~~v~vrggGh~~~g~~~~~~~gvvIdl~~l~~ 90 (501)
T 3pop_A 11 FTVGREDPRYIELSHSDNHRFVVEPEEFFLPATPDDVVASLQKAVTEGRGVACRSGGHCGQDFVGTPRRDLVLDLHNLHA 90 (501)
T ss_dssp EEEETTSTTHHHHTCCSCTTSCCCCSEEEECSSHHHHHHHHHHHHHTTCCEEEESSCCCSSSTTTSSCCSEEEECTTCCC
T ss_pred ceECCCCcchHHHHHHHhhccCCCCCEEEEeCCHHHHHHHHHHHHHcCCeEEEEeCCccCCCccccCCCEEEEEecccCC
Confidence 33444556666666789888899999999999999999999999999999999999999998877666799999999999
Q ss_pred ceeeeCCCCeEEEcCCccHHHHHHHHh-hcCceeecCCCc
Q psy6765 122 ILNFDELSGNVNSMSNALVTNRSLELS-NTGVVVLGVPLY 160 (246)
Q Consensus 122 i~~id~~~~~v~v~aG~~~~~l~~~L~-~~gl~~~~~p~s 160 (246)
| ++|+++.+++|++|+++.++.++|. ++|+.++...+.
T Consensus 91 i-~vd~~~~~v~v~aG~~~~~l~~~l~~~~Gl~~~~G~~~ 129 (501)
T 3pop_A 91 I-GPAADGAGVRVGSGATVDQVQKALFRRWNAALPLGACS 129 (501)
T ss_dssp E-EECTTSSSEEEETTCBHHHHHHHHHHHHSBCCCCCSBT
T ss_pred e-EEcCCCCEEEEECCcCHHHHHHHHHhhcCeEeCCCCCC
Confidence 7 8999999999999999999999996 479988875554
No 12
>3rja_A Carbohydrate oxidase; protein-substrate analogue complex, FAD binding domain, BERB berberine-like domain, glucooligosaccharide oxidase; HET: FAD NAG ABL TRS; 2.10A {Microdochium nivale} PDB: 3rj8_A*
Probab=99.77 E-value=2.8e-18 Score=157.74 Aligned_cols=115 Identities=9% Similarity=0.097 Sum_probs=100.0
Q ss_pred eecCccccccccccccccCCCCccEEEeCCCHHHHHHHHHHHHhCCCcEEEecCCCCCCCCccc-CCCeEEEecCCCCCc
Q psy6765 44 VLTDEDSVKPYNVDWLKTQEGKSKLVLKPKTTEEVSAILRYCNEQKIAVCPQGGNTGVVAGGVP-LYDEVIVSASLMNKI 122 (246)
Q Consensus 44 v~~~~~~~~~~~~~~~~~~~~~p~~vv~P~s~~ev~~~v~~a~~~~i~v~~~GgG~~~~g~~~~-~~~gvvidl~~m~~i 122 (246)
+..++..+...+..|+.++.+.|.+|++|+|++||+++|++|+++++||.+||||||+.|...+ ..++|+|||++||+|
T Consensus 15 ~~p~~~~y~~~~~~~n~~~~~~p~~vv~P~s~~dv~~~v~~a~~~~~~v~v~ggGh~~~g~~~~~~~~~vvIdl~~~~~i 94 (473)
T 3rja_A 15 DIPGTADYERDVEPFNIRLPYIPTAIAQTQTTAHIQSAVQCAKKLNLKVSAKSGGHSYASFGFGGENGHLMVQLDRMIDV 94 (473)
T ss_dssp CCTTSHHHHHHTCCSBTTSCCCCSEEEECCSHHHHHHHHHHHHHTTCCEEEESSCCCTTCGGGTSSSSCEEEECTTCCCE
T ss_pred ECCCCCchHHHHHHhhcccCCCCCEEEEeCCHHHHHHHHHHHHHcCCeEEEEcCCCCCCCCcccCCCCeEEEECCCCCce
Confidence 3445555666677898889999999999999999999999999999999999999999754432 456899999999999
Q ss_pred eeeeCCCCeEEEcCCccHHHHHHHHhhcC-ceeecCC
Q psy6765 123 LNFDELSGNVNSMSNALVTNRSLELSNTG-VVVLGVP 158 (246)
Q Consensus 123 ~~id~~~~~v~v~aG~~~~~l~~~L~~~g-l~~~~~p 158 (246)
.++|+++.+++|++|+++.+|.+++.++| +.+|...
T Consensus 95 ~~vd~~~~~v~v~aG~~~~~l~~~l~~~G~~~~p~G~ 131 (473)
T 3rja_A 95 ISYNDKTGIAHVEPGARLGHLATVLNDKYGRAISHGT 131 (473)
T ss_dssp EEEETTTTEEEECTTCBHHHHHHHHHHHHSEECCCCS
T ss_pred EEEcCCCCEEEECCCCCHHHHHHHHHHcCCEEeccCC
Confidence 66999999999999999999999999998 7777533
No 13
>2ipi_A Aclacinomycin oxidoreductase (aknox); anthracycline, flavoenzyme, twinning, MAD; HET: AKY FAD; 1.65A {Streptomyces galilaeus}
Probab=99.76 E-value=2.2e-18 Score=160.23 Aligned_cols=117 Identities=11% Similarity=0.036 Sum_probs=102.4
Q ss_pred eecCcccccccc-ccccccCCCCccEEEeCCCHHHHHHHHHHHHhCCCcEEEecCCCCCCCCcccCCCeEEEecCCCCCc
Q psy6765 44 VLTDEDSVKPYN-VDWLKTQEGKSKLVLKPKTTEEVSAILRYCNEQKIAVCPQGGNTGVVAGGVPLYDEVIVSASLMNKI 122 (246)
Q Consensus 44 v~~~~~~~~~~~-~~~~~~~~~~p~~vv~P~s~~ev~~~v~~a~~~~i~v~~~GgG~~~~g~~~~~~~gvvidl~~m~~i 122 (246)
+..++..+.... +.|+.++.+.|.+||+|+|++||+++|++|+++++||.+|||||++.|++.+..+||+|||++||+|
T Consensus 33 ~~p~d~~Y~~~~~~~~n~~~~~~p~~vv~p~s~~dv~~~v~~a~~~~~~~~vrggGh~~~g~~~~~~~gvvIdl~~l~~i 112 (521)
T 2ipi_A 33 VDRVDRRYQDLVTRGFNGRFRGRPDVVYVVHTADQVVDAVNQAMAAGQRIAVRSGGHCFEGFVDDPAVRAVIDMSQMRQV 112 (521)
T ss_dssp EESSSTTHHHHHTCCSCTTCCCCCSEEEECSSHHHHHHHHHHHHHHTCCEEEESSCCCTTCGGGCTTCCEEEECTTCCCE
T ss_pred ECCCCcchHHHHhccccccccCCCCEEEEcCCHHHHHHHHHHHHHcCCeEEEECCCcCCCCCcccCCCeEEEecccCCCe
Confidence 334455555555 7788888999999999999999999999999999999999999999876655567899999999998
Q ss_pred eeeeCCCCeEEEcCCccHHHHHHHHh-hcCceeecCCCch
Q psy6765 123 LNFDELSGNVNSMSNALVTNRSLELS-NTGVVVLGVPLYD 161 (246)
Q Consensus 123 ~~id~~~~~v~v~aG~~~~~l~~~L~-~~gl~~~~~p~s~ 161 (246)
++|+++.+++|++|+++.+|.++|. ++|+.+|+.++..
T Consensus 113 -~~d~~~~~v~v~aG~~~~~l~~~l~~~~Gl~~~~G~~~~ 151 (521)
T 2ipi_A 113 -FYDSGKRAFAVEPGATLGETYRALYLDWGVTIPAGVCPQ 151 (521)
T ss_dssp -EEETTTTEEEECTTSBHHHHHHHHHHHHSBCCCCCSCTT
T ss_pred -EEeCCCCEEEEeCCcCHHHHHHHHHHhcCceeCCCCCCC
Confidence 9999999999999999999999997 7999998866654
No 14
>3tx1_A UDP-N-acetylenolpyruvoylglucosamine reductase; structural genomics, center for structural genomics of infec diseases, csgid; HET: FAD; 2.69A {Listeria monocytogenes}
Probab=99.76 E-value=1.4e-18 Score=151.97 Aligned_cols=126 Identities=17% Similarity=0.341 Sum_probs=103.8
Q ss_pred CCHHHHHHHHHhhCCCCCCeecCccccccccccccccCCCCccEEEeCCCHHHHHHHHHHHHhCCCcEEEecCCCCCCCC
Q psy6765 25 LNDTHIQKFKQILSNDDNRVLTDEDSVKPYNVDWLKTQEGKSKLVLKPKTTEEVSAILRYCNEQKIAVCPQGGNTGVVAG 104 (246)
Q Consensus 25 ~~~~~~~~L~~~l~~~~~~v~~~~~~~~~~~~~~~~~~~~~p~~vv~P~s~~ev~~~v~~a~~~~i~v~~~GgG~~~~g~ 104 (246)
|+++++++|+++++ ++.+.++ +++..|++ +++++.|.++++|+|++||+++|++|+++++|+.++|+|||+.++
T Consensus 20 ~~~~~~~~L~~~lg--~~~v~~~-~~l~~~tt---~~igg~p~~vv~P~s~eev~~~v~~a~~~~~pv~v~GgGsnl~~~ 93 (322)
T 3tx1_A 20 FQSNAMNNLQTKFP--HIAIKLN-EPLSKYTY---TKTGGAADVFVMPKTIEEAQEVVAYCHQNKIPLTILGNGSNLIIK 93 (322)
T ss_dssp -----CCCHHHHCT--TSEEEEE-EEGGGGST---TSCCCEEEEEEECSSHHHHHHHHHHHHHTTCCEEEESCCTTEEEC
T ss_pred cCHHHHHHHHHhcC--CcceEcC-cchHHhcc---CCcCceeeEEEEeCCHHHHHHHHHHHHHcCCcEEEECCccCCCcC
Confidence 56778889999999 6777777 67888883 467899999999999999999999999999999999999999543
Q ss_pred cccCCCeEEEecCCCCCceeeeCCCCeEEEcCCccHHHHHHHHhhcCc----eeecCCCc
Q psy6765 105 GVPLYDEVIVSASLMNKILNFDELSGNVNSMSNALVTNRSLELSNTGV----VVLGVPLY 160 (246)
Q Consensus 105 ~~~~~~gvvidl~~m~~i~~id~~~~~v~v~aG~~~~~l~~~L~~~gl----~~~~~p~s 160 (246)
..+ .+|++|||++|++| .+| +.+++|+||+.|.+|.+++.++|+ +++..|++
T Consensus 94 ~~~-~~gvvI~l~~~~~I-~~d--~~~v~v~aG~~~~~l~~~l~~~Gl~Gle~~~giPgT 149 (322)
T 3tx1_A 94 DGG-IRGVILHLDLLQTI-ERN--NTQIVAMSGAKLIDTAKFALNESLSGLEFACGIPGS 149 (322)
T ss_dssp TTC-EEEEEEECTTCCCE-EEE--TTEEEEETTSBHHHHHHHHHHTTEESCGGGTTCCSB
T ss_pred CCC-CCeEEEECCCCCcE-EEC--CCEEEEecCcCHHHHHHHHHHcCCcccccCCCCcch
Confidence 221 24899999999998 575 358999999999999999999998 46667765
No 15
>2wdx_A Putative hexose oxidase; oxidoreductase-antibiotic complex, glycopeptide; HET: FAD GHP 3MY 3FG OMY BMA NAG N1L T55; 2.30A {Nonomuraea SP} PDB: 2wdw_A*
Probab=99.76 E-value=2.7e-18 Score=159.62 Aligned_cols=111 Identities=14% Similarity=0.052 Sum_probs=98.5
Q ss_pred Ccccccccc-ccccccCCCCccEEEeCCCHHHHHHHHHHHHhCCCcEEEecCCCCCCCCcccCCCeEEEecCCCCCceee
Q psy6765 47 DEDSVKPYN-VDWLKTQEGKSKLVLKPKTTEEVSAILRYCNEQKIAVCPQGGNTGVVAGGVPLYDEVIVSASLMNKILNF 125 (246)
Q Consensus 47 ~~~~~~~~~-~~~~~~~~~~p~~vv~P~s~~ev~~~v~~a~~~~i~v~~~GgG~~~~g~~~~~~~gvvidl~~m~~i~~i 125 (246)
++..+.... +.|+.++.+.|.+||+|+|++||+++|++|+++++||.+|||||++.|...+.++|++|||++||+| ++
T Consensus 38 ~d~~Y~~~~~~~~n~~~~~~p~~vv~p~s~~dv~~~v~~a~~~~~~~~v~ggGh~~~g~~~~~~~gvvIdl~~m~~i-~~ 116 (523)
T 2wdx_A 38 DDPRYLNLKLRGANSRFNGEPDYIHLVGSTQQVADAVEETVRTGKRVAVRSGGHCFEDFVDNPDVKVIIDMSLLTEI-AY 116 (523)
T ss_dssp TSTTHHHHHTCSSCTTCCCCCSEEEECSSHHHHHHHHHHHHHHTCCEEEESSCCCSSSSSSSTTCCEEEECTTCCCE-EE
T ss_pred CCcchHHHHhhhhhhcccCCCCEEEEeCCHHHHHHHHHHHHHcCCcEEEEcCCCCCCCCccCCCCeEEEEcccCCCE-EE
Confidence 444555555 6788888899999999999999999999999999999999999999887765567999999999998 99
Q ss_pred eCCCCeEEEcCCccHHHHHHHHh-hcCceeecCC
Q psy6765 126 DELSGNVNSMSNALVTNRSLELS-NTGVVVLGVP 158 (246)
Q Consensus 126 d~~~~~v~v~aG~~~~~l~~~L~-~~gl~~~~~p 158 (246)
|+++.+++|++|+++.+|.++|. ++|+.++...
T Consensus 117 d~~~~~v~v~aG~~~~~l~~~l~~~~Gl~~~~G~ 150 (523)
T 2wdx_A 117 DPSMNAFLIEPGNTLSEVYEKLYLGWNVTIPGGV 150 (523)
T ss_dssp ETTTTEEEECTTCBHHHHHHHHHHHHSCCCCCCC
T ss_pred cCCCCEEEEcCCCCHHHHHHHHHHhcCeEEccCC
Confidence 99999999999999999999998 4899888743
No 16
>2y3s_A TAML; oxidoreductase; HET: FAD TIR; 1.67A {Streptomyces SP} PDB: 2y3r_A* 2y08_A* 2y4g_A*
Probab=99.76 E-value=4.4e-18 Score=158.40 Aligned_cols=113 Identities=14% Similarity=0.066 Sum_probs=99.7
Q ss_pred eec-CccccccccccccccCCCCccEEEeCCCHHHHHHHHHHHHhCCCcEEEecCCCCCCCCcccCCCeEEEecCCCCCc
Q psy6765 44 VLT-DEDSVKPYNVDWLKTQEGKSKLVLKPKTTEEVSAILRYCNEQKIAVCPQGGNTGVVAGGVPLYDEVIVSASLMNKI 122 (246)
Q Consensus 44 v~~-~~~~~~~~~~~~~~~~~~~p~~vv~P~s~~ev~~~v~~a~~~~i~v~~~GgG~~~~g~~~~~~~gvvidl~~m~~i 122 (246)
+++ ++..+....+.|+.++.+.|.+|++|+|++||+++|++|+++++||.+|||||++.|.+....+|++|||++||+|
T Consensus 36 v~~p~~~~Y~~~~~~~n~~~~~~p~~vv~p~s~~dv~~~v~~a~~~~~~v~v~ggGh~~~g~~~~~~~gvvIdl~~l~~i 115 (530)
T 2y3s_A 36 SVAPGDIRYEDLRRGENLRFVGDPEEIHLVGSAAEIEQVLSRAVRSGKRVAVRSGGHCYEDFVANSDVRVVMDMSRLSAV 115 (530)
T ss_dssp EECTTSTTHHHHTCCSCTTCCCCCSEEEECCSHHHHHHHHHHHHHTTCCEEEESSCCCSSSTTTCTTCCEEEECTTCCCE
T ss_pred EECCCCccHHHHHhHhhhhccCCCCEEEecCCHHHHHHHHHHHHHcCCcEEEECCCCCCCCCcccCCCeEEEEcccCCCE
Confidence 444 4555666667788888899999999999999999999999999999999999999887665557999999999998
Q ss_pred eeeeCCCCeEEEcCCccHHHHHHHHhh-cCceeecC
Q psy6765 123 LNFDELSGNVNSMSNALVTNRSLELSN-TGVVVLGV 157 (246)
Q Consensus 123 ~~id~~~~~v~v~aG~~~~~l~~~L~~-~gl~~~~~ 157 (246)
++|+++.+++|++|+++.+|.++|.+ +|+.++..
T Consensus 116 -~~d~~~~~v~v~aG~~~~~l~~~l~~~~Gl~~~~G 150 (530)
T 2y3s_A 116 -GFDEERGAFAVEAGATLGAVYKTLFRVWGVTLPGG 150 (530)
T ss_dssp -EEETTTTEEEEETTCBHHHHHHHHHHHHSCCCCCC
T ss_pred -EEcCCCCEEEEeCCCCHHHHHHHHHhhcCeEEeCC
Confidence 99999999999999999999999985 89988863
No 17
>2bvf_A 6-hydroxy-D-nicotine oxidase; autoflavinylation, enantiomeric substrates, flavoenzymes, NI degradation; HET: FAD; 1.92A {Arthrobacter nicotinovorans} PDB: 2bvg_A* 2bvh_A*
Probab=99.75 E-value=5.1e-18 Score=155.54 Aligned_cols=116 Identities=13% Similarity=0.190 Sum_probs=100.9
Q ss_pred Ceec-CccccccccccccccCCCCccEEEeCCCHHHHHHHHHHHHhCCCcEEEecCCCCCCCCcccCCCeEEEecCCCCC
Q psy6765 43 RVLT-DEDSVKPYNVDWLKTQEGKSKLVLKPKTTEEVSAILRYCNEQKIAVCPQGGNTGVVAGGVPLYDEVIVSASLMNK 121 (246)
Q Consensus 43 ~v~~-~~~~~~~~~~~~~~~~~~~p~~vv~P~s~~ev~~~v~~a~~~~i~v~~~GgG~~~~g~~~~~~~gvvidl~~m~~ 121 (246)
.+++ ++..+......|+..+.+.|.+|++|+|++||+++|++|+++++|+.+|||||++.|... ..+|++|||++||+
T Consensus 15 ~v~~p~~~~y~~~~~~~~~~~~~~p~~vv~p~s~~dv~~~v~~a~~~~~~~~v~ggGh~~~~~~~-~~~gvvi~l~~l~~ 93 (459)
T 2bvf_A 15 EVIYPDDSGFDAIANIWDGRHLQRPSLIARCLSAGDVAKSVRYACDNGLEISVRSGGHNPNGYAT-NDGGIVLDLRLMNS 93 (459)
T ss_dssp EEECTTSTTHHHHHCCSCTTCCCCCSEEEECCSHHHHHHHHHHHHHHTCCEEEESSCCCTTCTTC-CSSSEEEECTTCCC
T ss_pred eEECCCCccHHHHHHHhhhhccCCCCEEEecCCHHHHHHHHHHHHHcCCcEEEEcCCcCCCCccc-cCCeEEEECCCCCC
Confidence 3444 344455555778888889999999999999999999999999999999999999987653 35689999999999
Q ss_pred ceeeeCCCCeEEEcCCccHHHHHHHHhhcCceeecCCCc
Q psy6765 122 ILNFDELSGNVNSMSNALVTNRSLELSNTGVVVLGVPLY 160 (246)
Q Consensus 122 i~~id~~~~~v~v~aG~~~~~l~~~L~~~gl~~~~~p~s 160 (246)
| ++|+++.+++|++|+++.+|.+++.++|+.+|+..+.
T Consensus 94 i-~~d~~~~~v~v~aG~~~~~l~~~l~~~Gl~~~~g~~~ 131 (459)
T 2bvf_A 94 I-HIDTAGSRARIGGGVISGDLVKEAAKFGLAAVTGMHP 131 (459)
T ss_dssp E-EEETTTTEEEEETTCBHHHHHHHHHTTTEEECCCSCT
T ss_pred E-EECCCCCEEEECCCCCHHHHHHHHHHcCCEecCCCCC
Confidence 8 8999999999999999999999999999999875544
No 18
>4feh_A Oxidoreductase DPRE1; alpha+beta, decaprenylphosphoryl-beta-D-RIBO; HET: FAD; 2.04A {Mycobacterium tuberculosis} PDB: 4fdo_A* 4fdn_A* 4fdp_A* 4ff6_A* 4aut_A* 4f4q_A* 4g3t_A 4g3u_A
Probab=99.75 E-value=6.9e-18 Score=155.28 Aligned_cols=118 Identities=13% Similarity=0.079 Sum_probs=104.2
Q ss_pred cccccccccCCCCccEEEeCCCHHHHHHHHHHHHhC--CCcEEEecCCCCCCCCcccCCCeEEEecCCCCCceeeeCCCC
Q psy6765 53 PYNVDWLKTQEGKSKLVLKPKTTEEVSAILRYCNEQ--KIAVCPQGGNTGVVAGGVPLYDEVIVSASLMNKILNFDELSG 130 (246)
Q Consensus 53 ~~~~~~~~~~~~~p~~vv~P~s~~ev~~~v~~a~~~--~i~v~~~GgG~~~~g~~~~~~~gvvidl~~m~~i~~id~~~~ 130 (246)
.+.++|. ++.+.|.+|++|+|++||+++|++|+++ ++|+.++|+|||+.+.+.+ .+|++|||++||+|+++|+++.
T Consensus 31 ~~~~~W~-~~~~~p~~vv~P~s~eev~~~v~~a~~~~~~~~v~~~G~G~s~~~~~~~-~~gvvIdl~~l~~i~~~d~~~~ 108 (481)
T 4feh_A 31 TRLTGWG-RTAPSVANVLRTPDAEMIVKAVARVAESGGGRGAIARGLGRSYGDNAQN-GGGLVIDMTPLNTIHSIDADTK 108 (481)
T ss_dssp EEECCTT-CCSCEEEEEEECSCHHHHHHHHHHHHTTTCTTCEEEECSSCSSSSTTCC-TTSEEEECTTCCCEEEEETTTT
T ss_pred ceeeccc-CCCCCCCEEEeCCCHHHHHHHHHHHHHcCCCceEEEEeCCcCCCCCCCC-cCeEEEECccCCCceEEcCCCC
Confidence 4556785 5689999999999999999999999999 7999999999999766553 5699999999999999999999
Q ss_pred eEEEcCCccHHHHHHHHhhcCceeecCCCchhHHhhHHhhhh
Q psy6765 131 NVNSMSNALVTNRSLELSNTGVVVLGVPLYDEVIVSASLMNK 172 (246)
Q Consensus 131 ~v~v~aG~~~~~l~~~L~~~gl~~~~~p~s~~~~~~~~~~~~ 172 (246)
+++|++|+++.+|.+.+.++|+.++..|+....+.++.....
T Consensus 109 ~v~v~aGv~l~~L~~~l~~~Gl~l~~~~g~~~~tvGGaia~~ 150 (481)
T 4feh_A 109 LVDIDAGVNLDQLMKAALPFGLWVPVLPGTRQVTVGGAIACD 150 (481)
T ss_dssp EEEEETTCBHHHHHHHHGGGTEECSCCCSCSCCBHHHHHHTT
T ss_pred EEEEcCCccHHHHHHHHHHcCCEEEEeCCcCccccCCccccc
Confidence 999999999999999999999999988888666677766543
No 19
>3js8_A Cholesterol oxidase; cholsterol, organic solvent stability, oxygen channel, FAD, flavoprotein, oxidoreductase; HET: FAD SUC; 1.54A {Chromobacterium SP}
Probab=99.74 E-value=6.7e-18 Score=156.22 Aligned_cols=121 Identities=14% Similarity=0.191 Sum_probs=103.2
Q ss_pred ccccccccccCCCCccEEEeCCCHHHHHHHHHHHHhCCCcEEEecCCCCCC-----CCcccCCCeEEEecC-CCCCceee
Q psy6765 52 KPYNVDWLKTQEGKSKLVLKPKTTEEVSAILRYCNEQKIAVCPQGGNTGVV-----AGGVPLYDEVIVSAS-LMNKILNF 125 (246)
Q Consensus 52 ~~~~~~~~~~~~~~p~~vv~P~s~~ev~~~v~~a~~~~i~v~~~GgG~~~~-----g~~~~~~~gvvidl~-~m~~i~~i 125 (246)
.+..++|+..+.+.|.+|++|+|++||+++|++|+++++||.++|+|||+. ++. +..+||+|||+ +||+| ++
T Consensus 16 ~~~~~nWs~~~~~~P~~vv~P~s~eEV~~~Vk~A~~~~~pv~v~GgGhs~~~l~~~gG~-~~~~GVvIdls~~Ln~I-~v 93 (540)
T 3js8_A 16 KQSFKNWAGDIKVDDVWTCAPRSADEVVKVANWAKDNGYKVRARGMMHNWSPLTLAAGV-SCPAVVLLDTTRYLTAM-SI 93 (540)
T ss_dssp EEEEECTTSCCEEEEEEEECCSSHHHHHHHHHHHHHHTCEEEEECSCCCSSCSSCCTTC-SSCSEEEEETTTTCCCE-EE
T ss_pred cceeeccccccCCCccEEEEcCCHHHHHHHHHHHHHcCCeEEEEeCCCCcccccccCCC-CCCCeEEEECcCcCCCE-EE
Confidence 444568888888999999999999999999999999999999999999996 554 55679999995 79998 99
Q ss_pred eCC--CCeEEEcCCccHHHHHHHHhhcCceeecCCCchhHHhhHHhhhhhh
Q psy6765 126 DEL--SGNVNSMSNALVTNRSLELSNTGVVVLGVPLYDEVIVSASLMNKIL 174 (246)
Q Consensus 126 d~~--~~~v~v~aG~~~~~l~~~L~~~gl~~~~~p~s~~~~~~~~~~~~~~ 174 (246)
|++ ..+|+|++|+++.+|.++|.++|+.++..++....+.++...+..+
T Consensus 94 D~~~~~~tVtV~AGv~l~~L~~~L~~~GL~l~~~~gi~~~TVGGaia~gag 144 (540)
T 3js8_A 94 DASGPVAKVTAQAGITMEALLTGLEKAGLGVTAAPAPGDLTLGGVLAINGH 144 (540)
T ss_dssp ECSSSSEEEEEETTSBHHHHHHHHHHTTEECSCCCSCSCSBHHHHHHTTCC
T ss_pred CCCCCccEEEEccCCCHHHHHHHHHHcCCEEEecCCCCCeEEcccccCCCC
Confidence 985 5799999999999999999999999998777654566666554433
No 20
>3fw9_A Reticuline oxidase; BI-covalent flavinylation, N-glycosylation, alakloid biosynt oxidoreductase, alkaloid metabolism; HET: FAD SLX NAG MAN; 1.49A {Eschscholzia californica} PDB: 3d2h_A* 3d2d_A* 3d2j_A* 3gsy_A* 4ec3_A* 3fw8_A* 3fw7_A* 3fwa_A*
Probab=99.74 E-value=1.2e-17 Score=154.20 Aligned_cols=103 Identities=11% Similarity=0.068 Sum_probs=92.4
Q ss_pred ccccccCCCCccEEEeCCCHHHHHHHHHHHHhCCCcEEEecCCCCCCCCccc-CCCeEEEecCCCCCceeeeCCCCeEEE
Q psy6765 56 VDWLKTQEGKSKLVLKPKTTEEVSAILRYCNEQKIAVCPQGGNTGVVAGGVP-LYDEVIVSASLMNKILNFDELSGNVNS 134 (246)
Q Consensus 56 ~~~~~~~~~~p~~vv~P~s~~ev~~~v~~a~~~~i~v~~~GgG~~~~g~~~~-~~~gvvidl~~m~~i~~id~~~~~v~v 134 (246)
..|+......|.+|++|+|++||+++|++|+++++||.+|||||++.|.+.+ +.+|++|||++||+| ++|+++.+++|
T Consensus 36 ~r~~~~~~~~P~~vv~P~s~~dV~~~v~~a~~~~~~v~vrGgGh~~~g~~~~~~~ggvvIdl~~m~~i-~vd~~~~~v~V 114 (495)
T 3fw9_A 36 PLFQNSLISKPSAIILPGSKEELSNTIRCIRKGSWTIRLRSGGHSYEGLSYTSDTPFILIDLMNLNRV-SIDLESETAWV 114 (495)
T ss_dssp GGGCSTTSCCCSEEECCCSHHHHHHHHHHHHTSSCEEEEESSCCCTTCTTSCCSSCEEEEECTTCCCE-EEETTTTEEEE
T ss_pred cccccccCCCCCEEEecCCHHHHHHHHHHHHHcCCeEEEECCCcCCCCccccCCCCeEEEECCCCCcE-EEeCCCCEEEE
Confidence 3566666789999999999999999999999999999999999999887765 346899999999998 99999999999
Q ss_pred cCCccHHHHHHHHhhc--CceeecCCC
Q psy6765 135 MSNALVTNRSLELSNT--GVVVLGVPL 159 (246)
Q Consensus 135 ~aG~~~~~l~~~L~~~--gl~~~~~p~ 159 (246)
++|+++.+|.+++.++ |+.+|+..+
T Consensus 115 ~aG~~l~~l~~~l~~~g~gl~~~~G~~ 141 (495)
T 3fw9_A 115 ESGSTLGELYYAITESSSKLGFTAGWC 141 (495)
T ss_dssp ETTCBHHHHHHHHHHHCSSEECCCCSC
T ss_pred cCCCCHHHHHHHHHHhcCCceeccCCC
Confidence 9999999999999988 788876443
No 21
>1zr6_A Glucooligosaccharide oxidase; alpha + beta, flavoenzyme, oxidoreductase; HET: NAG FAD; 1.55A {Acremonium strictum} PDB: 2axr_A* 3e0t_A* 3hsu_A*
Probab=99.73 E-value=7.6e-18 Score=155.98 Aligned_cols=125 Identities=11% Similarity=0.149 Sum_probs=101.2
Q ss_pred HHHHHHhhCCCCCC--eecC-ccccccccccccccCCCCccEEEeCCCHHHHHHHHHHHHhCCCcEEEecCCCCCCCCcc
Q psy6765 30 IQKFKQILSNDDNR--VLTD-EDSVKPYNVDWLKTQEGKSKLVLKPKTTEEVSAILRYCNEQKIAVCPQGGNTGVVAGGV 106 (246)
Q Consensus 30 ~~~L~~~l~~~~~~--v~~~-~~~~~~~~~~~~~~~~~~p~~vv~P~s~~ev~~~v~~a~~~~i~v~~~GgG~~~~g~~~ 106 (246)
+++|++.++ ... +... +..+......|+.++.+.|.+|++|+|++||+++|++|+++++|+.+|||||++.+++.
T Consensus 6 ~~~l~~~l~--~~~~~~~~~~~~~y~~~~~~~~~~~~~~p~~vv~p~s~~dv~~~v~~a~~~~~~~~v~ggGh~~~~~~~ 83 (503)
T 1zr6_A 6 FNSINACLA--AADVEFHEEDSEGWDMDGTAFNLRVDYDPAAIAIPRSTEDIAAAVQCGLDAGVQISAKGGGHSYGSYGF 83 (503)
T ss_dssp TCHHHHHHH--HTTCEECCTTSHHHHHHTSCSBGGGCCCCSEEEECCSHHHHHHHHHHHHHHTCCEEEESSCCCTTCTTT
T ss_pred HHHHHHhhC--cCCceecCCCccchHHHhhhhhhcccCCCCEEEEeCCHHHHHHHHHHHHHcCCeEEEECCCcCCCCCcc
Confidence 356777776 322 3332 33333345678878889999999999999999999999999999999999999987655
Q ss_pred c-CCCeEEEecCCCCCceeeeCCCCeEEEcCCccHHHHHHHHhhc-CceeecCC
Q psy6765 107 P-LYDEVIVSASLMNKILNFDELSGNVNSMSNALVTNRSLELSNT-GVVVLGVP 158 (246)
Q Consensus 107 ~-~~~gvvidl~~m~~i~~id~~~~~v~v~aG~~~~~l~~~L~~~-gl~~~~~p 158 (246)
+ .++|++|||++||+| ++| ++.+++|++|+++.++.++|.++ |+.+|...
T Consensus 84 ~~~~~gvvIdl~~l~~i-~~d-~~~~v~v~aG~~~~~l~~~l~~~~gl~~~~G~ 135 (503)
T 1zr6_A 84 GGEDGHLMLELDRMYRV-SVD-DNNVATIQGGARLGYTALELLDQGNRALSHGT 135 (503)
T ss_dssp TSSSSCEEEECTTCCCE-EEC-TTSCEEEETTCBHHHHHHHHHHTTSEECCCCS
T ss_pred cCCCCcEEEECccCCCE-EEC-CCCeEEEecCCCHHHHHHHHHHcCCEEeCCCC
Confidence 4 456899999999998 999 88899999999999999999665 48877643
No 22
>2i0k_A Oxidoreductase; MIX alpha beta, covalent FAD, flavoenzyme; HET: FAD; 1.60A {Brevibacterium sterolicum} SCOP: d.58.32.3 d.145.1.1 PDB: 1i19_A*
Probab=99.73 E-value=1.9e-17 Score=155.19 Aligned_cols=125 Identities=17% Similarity=0.221 Sum_probs=107.0
Q ss_pred CccccccccccccccCCCCccEEEeCCCHHHHHHHHHHHHhCCCcEEEecCCCCCCCCcccC----CCeEEEec-CCCCC
Q psy6765 47 DEDSVKPYNVDWLKTQEGKSKLVLKPKTTEEVSAILRYCNEQKIAVCPQGGNTGVVAGGVPL----YDEVIVSA-SLMNK 121 (246)
Q Consensus 47 ~~~~~~~~~~~~~~~~~~~p~~vv~P~s~~ev~~~v~~a~~~~i~v~~~GgG~~~~g~~~~~----~~gvvidl-~~m~~ 121 (246)
++..+..+.++|+..+.+.|.+|++|+|++||+++|++|+++++|+.++|+|||+.+-++.. .+|++||| ++||+
T Consensus 17 ~~~~y~~~~~~w~~~~~~~p~~vv~P~s~~ev~~~v~~a~~~~~~v~~~G~G~s~~~~~l~~~~~~~~gvvIdl~~~l~~ 96 (561)
T 2i0k_A 17 DIALFQQAYQNWSKEIMLDATWVCSPKTPQDVVRLANWAHEHDYKIRPRGAMAGWTPLTVEKGANVEKVILADTMTHLNG 96 (561)
T ss_dssp TSCCEEEEEECTTSSSEEEEEEEECCSSHHHHHHHHHHHHHHTCEEEEECCCCCCCTTSSCTTCCCTTEEEEECTTTSCC
T ss_pred CCHhHHHHHhhhhhccCCCCCEEEecCCHHHHHHHHHHHHHCCCcEEEECCCCCcccccccCCCcCCCeEEEechhhCCc
Confidence 35556666788988888999999999999999999999999999999999999985433221 25899999 89999
Q ss_pred ceeeeC--CCCeEEEcCCccHHHHHHHHhhcCceeecCCCchhHHhhHHhhhh
Q psy6765 122 ILNFDE--LSGNVNSMSNALVTNRSLELSNTGVVVLGVPLYDEVIVSASLMNK 172 (246)
Q Consensus 122 i~~id~--~~~~v~v~aG~~~~~l~~~L~~~gl~~~~~p~s~~~~~~~~~~~~ 172 (246)
| ++|+ +..+++|++|+++.+|.++|.++|+.++..|+....+.++.....
T Consensus 97 i-~vd~~~~~~~v~v~aGv~l~~L~~~l~~~Gl~l~~~~~~~~~TvGG~i~~~ 148 (561)
T 2i0k_A 97 I-TVNTGGPVATVTAGAGASIEAIVTELQKHDLGWANLPAPGVLSIGGALAVN 148 (561)
T ss_dssp E-EEECCSSSCEEEEETTSBHHHHHHHHHHTTEECSSCCSCTTCBHHHHHHTT
T ss_pred e-EecCcCCccEEEEcCCCCHHHHHHHHHHcCCcccccCCCCCcccCCCcccC
Confidence 8 9998 789999999999999999999999999999988656667665443
No 23
>3vte_A Tetrahydrocannabinolic acid synthase; BI-covalent flavinylation, oxidoreductase; HET: NAG FAD; 2.75A {Cannabis sativa}
Probab=99.71 E-value=5.2e-17 Score=150.43 Aligned_cols=102 Identities=12% Similarity=0.128 Sum_probs=89.9
Q ss_pred cccccCCCCccEEEeCCCHHHHHHHHHHHHhCCCcEEEecCCCCCCCCcc-cCCCeEEEecCCCCCceeeeCCCCeEEEc
Q psy6765 57 DWLKTQEGKSKLVLKPKTTEEVSAILRYCNEQKIAVCPQGGNTGVVAGGV-PLYDEVIVSASLMNKILNFDELSGNVNSM 135 (246)
Q Consensus 57 ~~~~~~~~~p~~vv~P~s~~ev~~~v~~a~~~~i~v~~~GgG~~~~g~~~-~~~~gvvidl~~m~~i~~id~~~~~v~v~ 135 (246)
.|+......|.+||+|+|++||+++|++|+++++||.+|||||++.|... +..+||+|||++||+| ++|+++.+++|+
T Consensus 45 rw~~~~~~~P~~vv~P~s~~dV~~~v~~a~~~~~~v~vrggGh~~~g~~~~~~~~gvvIdl~~l~~i-~vd~~~~~v~V~ 123 (518)
T 3vte_A 45 RFISDTTPKPLVIVTPSNNSHIQATILCSKKVGLQIRTRSGGHDAEGMSYISQVPFVVVDLRNMHSI-KIDVHSQTAWVE 123 (518)
T ss_dssp GGCSSSSCCCSEEECCCSHHHHHHHHHHHHHHTCEEEEESSCCCTTCTTTCCSSSEEEEECTTCCCE-EEETTTTEEEEE
T ss_pred ccccccCCCCCEEEEeCCHHHHHHHHHHHHHcCCcEEEECCCcCCCCCccCCCCCeEEEECCCCcee-EEeCCCCEEEEe
Confidence 46666678999999999999999999999999999999999999987664 3356999999999998 899999999999
Q ss_pred CCccHHHHHHHHhhc--CceeecCCC
Q psy6765 136 SNALVTNRSLELSNT--GVVVLGVPL 159 (246)
Q Consensus 136 aG~~~~~l~~~L~~~--gl~~~~~p~ 159 (246)
+|+++.++.++|.++ |+.++...+
T Consensus 124 aG~~l~~l~~~l~~~g~gl~~~~G~~ 149 (518)
T 3vte_A 124 AGATLGEVYYWINEKNENLSFPGGYC 149 (518)
T ss_dssp TTCBHHHHHHHHHHHCTTEECCCCSC
T ss_pred CCccHHHHHHHHHHhCCCceecCCCC
Confidence 999999999999876 566765443
No 24
>2vfr_A Xylitol oxidase, alditol oxidase; FAD, sugar, polyol, flavin, flavoprotein, oxidoreductase; HET: FAD; 1.1A {Streptomyces coelicolor} PDB: 2vfs_A* 2vft_A* 2vfu_A* 2vfv_A*
Probab=99.70 E-value=4.3e-17 Score=147.90 Aligned_cols=115 Identities=13% Similarity=0.171 Sum_probs=99.2
Q ss_pred ccccccCCCCccEEEeCCCHHHHHHHHHHHHhCCCcEEEecCCCCCCCCcccCCCeEEEecCCCCCceeeeCCCCeEEEc
Q psy6765 56 VDWLKTQEGKSKLVLKPKTTEEVSAILRYCNEQKIAVCPQGGNTGVVAGGVPLYDEVIVSASLMNKILNFDELSGNVNSM 135 (246)
Q Consensus 56 ~~~~~~~~~~p~~vv~P~s~~ev~~~v~~a~~~~i~v~~~GgG~~~~g~~~~~~~gvvidl~~m~~i~~id~~~~~v~v~ 135 (246)
++|+..+...|.+|++|+|++||+++|++| +|+.++|+||++++.+.+..+|++|||++||+|+++|+++.+++|+
T Consensus 11 ~~w~~~~~~~p~~v~~P~s~~ev~~~v~~a----~~v~~~G~G~s~~~~~~~~~~g~vi~l~~l~~i~~~d~~~~~v~v~ 86 (422)
T 2vfr_A 11 TNWAGNITYTAKELLRPHSLDALRALVADS----ARVRVLGSGHSFNEIAEPGDGGVLLSLAGLPSVVDVDTAARTVRVG 86 (422)
T ss_dssp BCSSSSCBCSCSSCBCCSSHHHHHHHHHHC----SSEEECSSCCCCSSTTCCCTTCEEECSTTSCCCEEEETTTTEEEEE
T ss_pred ecCCCCccCCCCEEEeCCCHHHHHHHHHhC----CCEEEEECCCCCCCCccCCCCcEEEEhhhCCCcEEEcCCCCEEEEc
Confidence 578888889999999999999999999999 8999999999998877754569999999999998999999999999
Q ss_pred CCccHHHHHHHHhhcCceeecCCCchhHHhhHHhhhhhh
Q psy6765 136 SNALVTNRSLELSNTGVVVLGVPLYDEVIVSASLMNKIL 174 (246)
Q Consensus 136 aG~~~~~l~~~L~~~gl~~~~~p~s~~~~~~~~~~~~~~ 174 (246)
+|+++.+|.++|.++|+.+|..++....+.++......+
T Consensus 87 aG~~l~~l~~~l~~~Gl~l~~~~~~~~~tvGG~i~~~~~ 125 (422)
T 2vfr_A 87 GGVRYAELARVVHARGLALPNMASLPHISVAGSVATGTH 125 (422)
T ss_dssp TTCBHHHHHHHHHHTTEECSCCCSSSCSBHHHHHHHTCC
T ss_pred CCCCHHHHHHHHHHcCCcccCCCCCCCeeHHHHHhcCCC
Confidence 999999999999999999864444444466666655433
No 25
>4bby_A Alkyldihydroxyacetonephosphate synthase, peroxiso; transferase, plasmalogen, flavin, peroxisome; HET: FAD; 1.90A {Cavia porcellus} PDB: 4bc9_A* 4bca_A* 4bc7_A*
Probab=99.58 E-value=3.7e-15 Score=142.04 Aligned_cols=106 Identities=20% Similarity=0.215 Sum_probs=80.0
Q ss_pred EEcCCccHHHHHHHHhhcCceeecCCCchhHHhhHHhhhhhhc----------cccccCccceEEcCCCHHHHHHHHHHH
Q psy6765 133 NSMSNALVTNRSLELSNTGVVVLGVPLYDEVIVSASLMNKILN----------FDELSGKSKLVLKPKTTEEVSAILRYC 202 (246)
Q Consensus 133 ~v~aG~~~~~l~~~L~~~gl~~~~~p~s~~~~~~~~~~~~~~~----------~~~~~~~p~~vv~P~s~~~v~~~v~~a 202 (246)
.+.+-....++.++|.+....+..++. .. ..+.++ ...+...|++||+|+|++||+++|++|
T Consensus 154 ~~p~~~~~~~~~~~l~~~~~~~~~~~~--~r------~~h~~g~s~~d~~~~~~g~~~~~P~aVV~P~s~eeV~~iv~~A 225 (658)
T 4bby_A 154 DTPPSIVNEDFLHELKKTNISYSQEAD--DR------VFRAHGHCLHEIFLLREGMFERIPDIVLWPTCHDDVVKIVNLA 225 (658)
T ss_dssp CCCCCCCCHHHHHHHHHHTCEEECCHH--HH------HHTSCCSCHHHHHHHHSSCCSCCCSEEEECCSHHHHHHHHHHH
T ss_pred cCCCCCCCHHHHHHHHHhcccccCchH--HH------hhhcCCCCHHHHHHHhCCcccCCcCEEEeeCCHHHHHHHHHHH
Confidence 345556667788888765444432221 11 112222 224567899999999999999999999
Q ss_pred HhCCCcEEEecCCCCCCCCcccC----CCcEEEEcCCcCcceeccCCC
Q psy6765 203 NEQKIAVCPQGGNTGVVAGGVPL----YDEVIVSASLMNKILNFDELS 246 (246)
Q Consensus 203 ~~~~~~~~~~ggG~~~~~~~~~~----~~gv~idl~~m~~i~~~d~~~ 246 (246)
++|++||+|||||||+.|+..+. .++|+|||++||+|+++|+++
T Consensus 226 ~~~~ipVvprGgGTsl~GG~~~~~~~~~ggVvLDlsrMnrIleiD~~~ 273 (658)
T 4bby_A 226 CKYNLCIIPIGGGTSVSYGLMCPADETRTIISLDTSQMNRILWVDENN 273 (658)
T ss_dssp HHTTCEEEEESSCCCSSSTTCCCTTCCSCEEEEECTTCCCEEEEETTT
T ss_pred HHCCCeEEEECCCcCCCCCCCCCCCCCCcEEEEECccCCCcEEEcCCC
Confidence 99999999999999999887763 346999999999999999874
No 26
>1uxy_A MURB, uridine diphospho-N-acetylenolpyruvylglucosamine reductase; peptidoglycan synthesis, cell WALL, cell division, oxidoreductase, NADP; HET: FAD EPU; 1.80A {Escherichia coli} SCOP: d.145.1.2 d.146.1.1 PDB: 1mbb_A* 1mbt_A* 2q85_A* 2mbr_A*
Probab=99.54 E-value=2e-14 Score=126.57 Aligned_cols=104 Identities=13% Similarity=0.122 Sum_probs=88.2
Q ss_pred ccccccccccccCCCCccEEEeCCCHHHHHHHHHHHHhCCCcEEEecCCCCCCCCcccCCCeEEEecCCCCCceeeeCCC
Q psy6765 50 SVKPYNVDWLKTQEGKSKLVLKPKTTEEVSAILRYCNEQKIAVCPQGGNTGVVAGGVPLYDEVIVSASLMNKILNFDELS 129 (246)
Q Consensus 50 ~~~~~~~~~~~~~~~~p~~vv~P~s~~ev~~~v~~a~~~~i~v~~~GgG~~~~g~~~~~~~gvvidl~~m~~i~~id~~~ 129 (246)
+|..|+ ++++++.|.++++|+|++||++++++|+++++|+.++|+|||+.+..- -+|+||+++ |++|..++.++
T Consensus 2 ~L~~~t---t~~igg~a~~~v~p~s~eel~~~l~~a~~~~~pv~vlGgGSnll~~d~--~~GvVI~l~-~~~i~~i~~~~ 75 (340)
T 1uxy_A 2 SLKPWN---TFGIDHNAQHIVCAEDEQQLLNAWQYATAEGQPVLILGEGSNVLFLED--YRGTVIINR-IKGIEIHDEPD 75 (340)
T ss_dssp BCGGGS---TTCCCCBEEEEEEESSHHHHHHHHHHHHHTTCCEEEESSCTTEEECSC--EEEEEEEEC-CCCEEEEECSS
T ss_pred Cccccc---cCCCCccccEEEEeCCHHHHHHHHHHHHHcCCCEEEECCCcCCcccCC--CCeEEEEcc-CCCcEEEecCC
Confidence 356676 567889999999999999999999999999999999999999965432 258999996 99987677666
Q ss_pred -CeEEEcCCccHHHHHHHHhhcCce----eecCCC
Q psy6765 130 -GNVNSMSNALVTNRSLELSNTGVV----VLGVPL 159 (246)
Q Consensus 130 -~~v~v~aG~~~~~l~~~L~~~gl~----~~~~p~ 159 (246)
.++++++|+.|.+|.+++.++|+. +...|+
T Consensus 76 ~~~v~vgAG~~~~~l~~~~~~~Gl~Gle~~~gIPG 110 (340)
T 1uxy_A 76 AWYLHVGAGENWHRLVKYTLQEGMPGLENLALIPG 110 (340)
T ss_dssp EEEEEEETTSBHHHHHHHHHHTTCCSCGGGTTCCS
T ss_pred CeEEEEecCCCHHHHHHHHHHCCCCccccccCCcc
Confidence 689999999999999999999983 444554
No 27
>3i99_A UDP-N-acetylenolpyruvoylglucosamine reductase; structural genomics, center for structural of infectious diseases, csgid; HET: FAD; 2.20A {Vibrio cholerae}
Probab=99.53 E-value=6.5e-15 Score=130.21 Aligned_cols=106 Identities=12% Similarity=0.117 Sum_probs=90.4
Q ss_pred ccccccccccccccCCCCccEEEeCCCHHHHHHHHHHHHhCCCcEEEecCCCCCCCCcccCCCeEEEecCCCCCceeeeC
Q psy6765 48 EDSVKPYNVDWLKTQEGKSKLVLKPKTTEEVSAILRYCNEQKIAVCPQGGNTGVVAGGVPLYDEVIVSASLMNKILNFDE 127 (246)
Q Consensus 48 ~~~~~~~~~~~~~~~~~~p~~vv~P~s~~ev~~~v~~a~~~~i~v~~~GgG~~~~g~~~~~~~gvvidl~~m~~i~~id~ 127 (246)
+..+..|+ ++++++.|.++++|+|++||++++++|+++++|+.++|+|||+.+... -+|+||+++ |++| +++.
T Consensus 16 ~~~L~~~t---t~~igg~a~~vv~p~s~eel~~~v~~a~~~~ipv~vlGgGSNll~~d~--~~GvVI~l~-~~~i-~v~~ 88 (357)
T 3i99_A 16 GANLKPYH---TFGIEQLAAQLVVAESIDDLKALYCSAEWASLPKLIIGKGSNMLFTCH--YTGMIVVNR-LNGI-EHQQ 88 (357)
T ss_dssp EEESGGGS---TTCCSCEEEEEEEECSHHHHHHHHSSSTTTTSCEEEESSCTTEEECSC--EEEEEEEEC-CCCE-EEEE
T ss_pred CCcchhhc---cCCCCccceEEEEECCHHHHHHHHHHHHHcCCCEEEECCCcCcccCCC--CCeEEEEcC-CCce-EEec
Confidence 45688888 568899999999999999999999999999999999999999954432 248999998 9997 6653
Q ss_pred --CCCeEEEcCCccHHHHHHHHhhcCce----eecCCCc
Q psy6765 128 --LSGNVNSMSNALVTNRSLELSNTGVV----VLGVPLY 160 (246)
Q Consensus 128 --~~~~v~v~aG~~~~~l~~~L~~~gl~----~~~~p~s 160 (246)
++.+++|++|+.|.+|.+++.++|+. +...|++
T Consensus 89 ~~~~~~v~v~AG~~~~~l~~~a~~~Gl~GlE~l~gIPGt 127 (357)
T 3i99_A 89 DDDYHRLHVAGGEDWPSLVSWCVEQGIGGLENLALIPGC 127 (357)
T ss_dssp CSSEEEEEEETTSBHHHHHHHHHHTTCTTCGGGTTCCSB
T ss_pred cCCceEEEEeCCCcHHHHHHHHHHcCCcCccccCCCCch
Confidence 45689999999999999999999984 5566654
No 28
>3tsh_A Pollen allergen PHL P 4; flavoprotein, BI-covalent flavinylation, oxidoreductase, Glu dehydrogenase, N-glycosylation, allergy, dehydrogenase; HET: FDA; 1.90A {Phleum pratense} PDB: 3tsj_A*
Probab=99.47 E-value=1.4e-13 Score=127.34 Aligned_cols=98 Identities=10% Similarity=0.093 Sum_probs=74.4
Q ss_pred HHHHHHHh----hcCceeecCCCchhHHhhHHhhhhh-----hccccccCccceEEcCCCHHHHHHHHHHHHhCCCcEEE
Q psy6765 141 TNRSLELS----NTGVVVLGVPLYDEVIVSASLMNKI-----LNFDELSGKSKLVLKPKTTEEVSAILRYCNEQKIAVCP 211 (246)
Q Consensus 141 ~~l~~~L~----~~gl~~~~~p~s~~~~~~~~~~~~~-----~~~~~~~~~p~~vv~P~s~~~v~~~v~~a~~~~~~~~~ 211 (246)
.++.+.|. ..-+..|.+|.|... ...+ |+ .....+|.+||+|+|++||+++|++|++|+++|.+
T Consensus 9 ~~f~~~L~~~~~~~~v~~~~~~~y~~~------~~~~~~n~rw~-~~~~~~P~~vv~p~~~~~v~~~v~~a~~~~~~~~~ 81 (500)
T 3tsh_A 9 EDFLGCLVKEIPPRLLYAKSSPAYPSV------LGQTIRNSRWS-SPDNVKPLYIITPTQVSHIQSAVVCGRRHSVRIRV 81 (500)
T ss_dssp CHHHHHHHHHSCGGGEEETTSTTHHHH------HHTTCCCTTTT-STTSCCCSEEECCSSHHHHHHHHHHHHHTTCEEEE
T ss_pred HHHHHHHHhhCCCCEEECCCCCccHHH------HHhhhcccccc-CCCCCCceEEEEcCCHHHHHHHHHHHHHCCCcEEE
Confidence 34444443 344566788888654 2222 22 23457899999999999999999999999999999
Q ss_pred ecCCCCCCCCc---ccCCCcEEEEcCCcCcceeccCCC
Q psy6765 212 QGGNTGVVAGG---VPLYDEVIVSASLMNKILNFDELS 246 (246)
Q Consensus 212 ~ggG~~~~~~~---~~~~~gv~idl~~m~~i~~~d~~~ 246 (246)
|||||++.|.+ ...++|++|||++||+| ++|+++
T Consensus 82 r~gGh~~~g~s~~~~~~~~~~~idl~~~~~v-~~d~~~ 118 (500)
T 3tsh_A 82 RSGGHDYEGLSYRSLQPETFAVVDLNKMRAV-WVDGKA 118 (500)
T ss_dssp ESSCCCTTCTTTCCSSSCCEEEEECTTCCCE-EEETTT
T ss_pred EcCCcCCCCCcCCCCCcCCeEEEECcCCCCE-EECCCC
Confidence 99999987643 33467899999999997 898863
No 29
>3pm9_A Putative oxidoreductase; putative D-2-hydroxyglutarate dehydrogenase, putative D-LACT dehydrogenase; HET: FAD; 2.57A {Rhodopseudomonas palustris}
Probab=99.42 E-value=2.5e-13 Score=124.73 Aligned_cols=69 Identities=48% Similarity=0.713 Sum_probs=64.3
Q ss_pred cccCccceEEcCCCHHHHHHHHHHHHhCCCcEEEecCCCCCCCCcccCCCcEEEEcCCcCcceeccCCC
Q psy6765 178 ELSGKSKLVLKPKTTEEVSAILRYCNEQKIAVCPQGGNTGVVAGGVPLYDEVIVSASLMNKILNFDELS 246 (246)
Q Consensus 178 ~~~~~p~~vv~P~s~~~v~~~v~~a~~~~~~~~~~ggG~~~~~~~~~~~~gv~idl~~m~~i~~~d~~~ 246 (246)
.+...|.+|++|+|++||+++|++|+++++||+|+|||||+.|++.+..+||+|||++||+|+++|+++
T Consensus 47 ~~~~~p~~vv~P~s~eeV~~~v~~a~~~~~pv~~~GgGt~~~g~~~~~~ggvvIdl~~m~~i~~id~~~ 115 (476)
T 3pm9_A 47 LYRGHSPLVLRPGSTEEVVAICKLANEARVALVPQGGNTGLVGGQTPHNGEVVISLKRMDKIREIDTSS 115 (476)
T ss_dssp CCBCCCSCEECCCSHHHHHHHHHHHHHHTCCEEEESSSCCSSSTTCCCSSCEEEECTTCCCEEEEETTT
T ss_pred ccCCCCCEEEecCCHHHHHHHHHHHHHcCCeEEEEeCCCCCCCCccCCCCcEEEEeeCCCceEEEcCCC
Confidence 457899999999999999999999999999999999999999998887779999999999999998763
No 30
>3pop_A GILR oxidase; FAD binding protein, gilvocarcin, gilvocarcin biosynthesis, covalently bound FAD, oxidoreductase; HET: FAD; 1.65A {Streptomyces griseoflavus} PDB: 3pqb_A*
Probab=99.42 E-value=3.9e-13 Score=124.21 Aligned_cols=85 Identities=15% Similarity=0.060 Sum_probs=73.2
Q ss_pred ceeecCCCchhHHhhHHhhhhhhccccccCccceEEcCCCHHHHHHHHHHHHhCCCcEEEecCCCCCCCCcccCCCcEEE
Q psy6765 152 VVVLGVPLYDEVIVSASLMNKILNFDELSGKSKLVLKPKTTEEVSAILRYCNEQKIAVCPQGGNTGVVAGGVPLYDEVIV 231 (246)
Q Consensus 152 l~~~~~p~s~~~~~~~~~~~~~~~~~~~~~~p~~vv~P~s~~~v~~~v~~a~~~~~~~~~~ggG~~~~~~~~~~~~gv~i 231 (246)
+.+|.+|.|+.. . +.|+ ..+...|.+|++|++++||+++|++|++++++|.++||||++.+...+.++|++|
T Consensus 12 ~~~p~~~~y~~~------~-~~~n-~~~~~~P~~vv~P~s~~dV~~~v~~a~~~~~~v~vrggGh~~~g~~~~~~~gvvI 83 (501)
T 3pop_A 12 TVGREDPRYIEL------S-HSDN-HRFVVEPEEFFLPATPDDVVASLQKAVTEGRGVACRSGGHCGQDFVGTPRRDLVL 83 (501)
T ss_dssp EEETTSTTHHHH------T-CCSC-TTSCCCCSEEEECSSHHHHHHHHHHHHHTTCCEEEESSCCCSSSTTTSSCCSEEE
T ss_pred eECCCCcchHHH------H-HHHh-hccCCCCCEEEEeCCHHHHHHHHHHHHHcCCeEEEEeCCccCCCccccCCCEEEE
Confidence 677888988765 2 2333 3567899999999999999999999999999999999999999877765678999
Q ss_pred EcCCcCcceeccCC
Q psy6765 232 SASLMNKILNFDEL 245 (246)
Q Consensus 232 dl~~m~~i~~~d~~ 245 (246)
||++||+| ++|++
T Consensus 84 dl~~l~~i-~vd~~ 96 (501)
T 3pop_A 84 DLHNLHAI-GPAAD 96 (501)
T ss_dssp ECTTCCCE-EECTT
T ss_pred EecccCCe-EEcCC
Confidence 99999998 88875
No 31
>3fw9_A Reticuline oxidase; BI-covalent flavinylation, N-glycosylation, alakloid biosynt oxidoreductase, alkaloid metabolism; HET: FAD SLX NAG MAN; 1.49A {Eschscholzia californica} PDB: 3d2h_A* 3d2d_A* 3d2j_A* 3gsy_A* 4ec3_A* 3fw8_A* 3fw7_A* 3fwa_A*
Probab=99.42 E-value=4.7e-13 Score=123.47 Aligned_cols=87 Identities=11% Similarity=0.160 Sum_probs=70.4
Q ss_pred ceeecCCCchhHHhhHHhhhhhhcc----ccccCccceEEcCCCHHHHHHHHHHHHhCCCcEEEecCCCCCCCCcccC-C
Q psy6765 152 VVVLGVPLYDEVIVSASLMNKILNF----DELSGKSKLVLKPKTTEEVSAILRYCNEQKIAVCPQGGNTGVVAGGVPL-Y 226 (246)
Q Consensus 152 l~~~~~p~s~~~~~~~~~~~~~~~~----~~~~~~p~~vv~P~s~~~v~~~v~~a~~~~~~~~~~ggG~~~~~~~~~~-~ 226 (246)
+.+|.+|.|+.. ..++... ......|.+|++|++++||+++|++|+++++||.++||||++.+.+... .
T Consensus 17 v~~p~~~~y~~~------~~~~~~n~r~~~~~~~~P~~vv~P~s~~dV~~~v~~a~~~~~~v~vrGgGh~~~g~~~~~~~ 90 (495)
T 3fw9_A 17 FSADSDSDFNRF------LHLSIQNPLFQNSLISKPSAIILPGSKEELSNTIRCIRKGSWTIRLRSGGHSYEGLSYTSDT 90 (495)
T ss_dssp CCCCTTCHHHHH------HHHTCCCGGGCSTTSCCCSEEECCCSHHHHHHHHHHHHTSSCEEEEESSCCCTTCTTSCCSS
T ss_pred EECCCCCchHHH------HhhhhhhcccccccCCCCCEEEecCCHHHHHHHHHHHHHcCCeEEEECCCcCCCCccccCCC
Confidence 567888888664 2222111 1345799999999999999999999999999999999999998776643 4
Q ss_pred CcEEEEcCCcCcceeccCC
Q psy6765 227 DEVIVSASLMNKILNFDEL 245 (246)
Q Consensus 227 ~gv~idl~~m~~i~~~d~~ 245 (246)
+|++|||++||+| ++|++
T Consensus 91 ggvvIdl~~m~~i-~vd~~ 108 (495)
T 3fw9_A 91 PFILIDLMNLNRV-SIDLE 108 (495)
T ss_dssp CEEEEECTTCCCE-EEETT
T ss_pred CeEEEECCCCCcE-EEeCC
Confidence 6899999999999 99875
No 32
>2gqt_A UDP-N-acetylenolpyruvylglucosamine reductase; peptidoglycan biosynthesis, enolpyruvyl-UDP-N- acetylglucosamine, flavin adenine dinucleotide; HET: FAD; 1.30A {Thermus caldophilus} PDB: 2gqu_A*
Probab=99.40 E-value=3e-13 Score=115.20 Aligned_cols=95 Identities=17% Similarity=0.196 Sum_probs=79.8
Q ss_pred ccccccccccccCCCCccEEEeCCCHHHHHHHHHHHHhCCCcEEEecCCCCCCCCcccCCCeEEEecCCCCCceeeeCCC
Q psy6765 50 SVKPYNVDWLKTQEGKSKLVLKPKTTEEVSAILRYCNEQKIAVCPQGGNTGVVAGGVPLYDEVIVSASLMNKILNFDELS 129 (246)
Q Consensus 50 ~~~~~~~~~~~~~~~~p~~vv~P~s~~ev~~~v~~a~~~~i~v~~~GgG~~~~g~~~~~~~gvvidl~~m~~i~~id~~~ 129 (246)
++..|+ ++++++.|. +++|+|++||++++ ++|+.++|+|||+.++..+.++|+||++++|++| ++|.
T Consensus 10 ~l~~~t---t~~igg~a~-vv~p~s~edv~~~v------~ipv~v~GgGsnll~~d~~~~~GvVI~l~~~~~I-~vd~-- 76 (268)
T 2gqt_A 10 LLKDYT---TLGVGGPAE-LWTVETREELKRAT------EAPYRVLGNGSNLLVLDEGVPERVIRLAGEFQTY-DLKG-- 76 (268)
T ss_dssp EGGGGS---SSCCCCEEE-EEEECSHHHHHHHT------TSCEEECSSSSSEEECTTCCSSEEEEECGGGGCB-CTTS--
T ss_pred ChHHhc---ccccCcceE-EEEeCCHHHHHHHh------CCCeEEcCCCcCceecCCCcCCeEEEEcCCCCCc-EEcC--
Confidence 577777 347788889 99999999999999 8999999999999765554455999999999998 6652
Q ss_pred CeEEEcCCccHHHHHHHHhhcCce----eecCCCc
Q psy6765 130 GNVNSMSNALVTNRSLELSNTGVV----VLGVPLY 160 (246)
Q Consensus 130 ~~v~v~aG~~~~~l~~~L~~~gl~----~~~~p~s 160 (246)
+|++|+.|.+|.+++.++|+. +...|++
T Consensus 77 ---~v~aG~~~~~l~~~~~~~Gl~Gle~~~giPGt 108 (268)
T 2gqt_A 77 ---WVGAGTLLPLLVQEAARAGLSGLEGLLGIPAQ 108 (268)
T ss_dssp ---EEETTSBHHHHHHHHHHTTEESCGGGTTCCCB
T ss_pred ---EEECCCCHHHHHHHHHHcCCcCCccccCccch
Confidence 899999999999999999983 5556653
No 33
>3rja_A Carbohydrate oxidase; protein-substrate analogue complex, FAD binding domain, BERB berberine-like domain, glucooligosaccharide oxidase; HET: FAD NAG ABL TRS; 2.10A {Microdochium nivale} PDB: 3rj8_A*
Probab=99.39 E-value=8.1e-13 Score=121.34 Aligned_cols=95 Identities=15% Similarity=0.249 Sum_probs=74.4
Q ss_pred HHHHHhhcC--ceeecCCCchhHHhhHHhhhhhhccccccCccceEEcCCCHHHHHHHHHHHHhCCCcEEEecCCCCCCC
Q psy6765 143 RSLELSNTG--VVVLGVPLYDEVIVSASLMNKILNFDELSGKSKLVLKPKTTEEVSAILRYCNEQKIAVCPQGGNTGVVA 220 (246)
Q Consensus 143 l~~~L~~~g--l~~~~~p~s~~~~~~~~~~~~~~~~~~~~~~p~~vv~P~s~~~v~~~v~~a~~~~~~~~~~ggG~~~~~ 220 (246)
|.+.|...+ +.+|.++.|+.. . ..|+ ..+...|.+|++|+|++||+++|++|+++++||.++|||||+.+
T Consensus 3 l~~cl~~~~~~v~~p~~~~y~~~------~-~~~n-~~~~~~p~~vv~P~s~~dv~~~v~~a~~~~~~v~v~ggGh~~~g 74 (473)
T 3rja_A 3 IEACLSAAGVPIDIPGTADYERD------V-EPFN-IRLPYIPTAIAQTQTTAHIQSAVQCAKKLNLKVSAKSGGHSYAS 74 (473)
T ss_dssp HHHHHHHTTCCBCCTTSHHHHHH------T-CCSB-TTSCCCCSEEEECCSHHHHHHHHHHHHHTTCCEEEESSCCCTTC
T ss_pred HHHHHHhCCCcEECCCCCchHHH------H-HHhh-cccCCCCCEEEEeCCHHHHHHHHHHHHHcCCeEEEEcCCCCCCC
Confidence 455565543 566777777554 2 2333 34678999999999999999999999999999999999999985
Q ss_pred Ccc-cCCCcEEEEcCCcCcceeccCC
Q psy6765 221 GGV-PLYDEVIVSASLMNKILNFDEL 245 (246)
Q Consensus 221 ~~~-~~~~gv~idl~~m~~i~~~d~~ 245 (246)
... ...+||+|||++||+|.++|++
T Consensus 75 ~~~~~~~~~vvIdl~~~~~i~~vd~~ 100 (473)
T 3rja_A 75 FGFGGENGHLMVQLDRMIDVISYNDK 100 (473)
T ss_dssp GGGTSSSSCEEEECTTCCCEEEEETT
T ss_pred CcccCCCCeEEEECCCCCceEEEcCC
Confidence 433 2356799999999999778875
No 34
>3vte_A Tetrahydrocannabinolic acid synthase; BI-covalent flavinylation, oxidoreductase; HET: NAG FAD; 2.75A {Cannabis sativa}
Probab=99.38 E-value=1.5e-12 Score=120.54 Aligned_cols=88 Identities=15% Similarity=0.217 Sum_probs=70.4
Q ss_pred CceeecCCCchhHHhhHHhhhhhhc----cccccCccceEEcCCCHHHHHHHHHHHHhCCCcEEEecCCCCCCCCcc-cC
Q psy6765 151 GVVVLGVPLYDEVIVSASLMNKILN----FDELSGKSKLVLKPKTTEEVSAILRYCNEQKIAVCPQGGNTGVVAGGV-PL 225 (246)
Q Consensus 151 gl~~~~~p~s~~~~~~~~~~~~~~~----~~~~~~~p~~vv~P~s~~~v~~~v~~a~~~~~~~~~~ggG~~~~~~~~-~~ 225 (246)
.+.+|.++.|+.. ..++.. .......|.+|++|++++||+++|++|++++++|.++||||++.+... +.
T Consensus 24 ~v~~p~~~~y~~~------~~~~~~n~rw~~~~~~~P~~vv~P~s~~dV~~~v~~a~~~~~~v~vrggGh~~~g~~~~~~ 97 (518)
T 3vte_A 24 LVYTQHDQLYMSI------LNSTIQNLRFISDTTPKPLVIVTPSNNSHIQATILCSKKVGLQIRTRSGGHDAEGMSYISQ 97 (518)
T ss_dssp CEECTTSTTHHHH------HHHTCCBGGGCSSSSCCCSEEECCCSHHHHHHHHHHHHHHTCEEEEESSCCCTTCTTTCCS
T ss_pred eEECCCCcchHHH------HhhhhcccccccccCCCCCEEEEeCCHHHHHHHHHHHHHcCCcEEEECCCcCCCCCccCCC
Confidence 3567888888765 222211 123457999999999999999999999999999999999999987654 23
Q ss_pred CCcEEEEcCCcCcceeccCC
Q psy6765 226 YDEVIVSASLMNKILNFDEL 245 (246)
Q Consensus 226 ~~gv~idl~~m~~i~~~d~~ 245 (246)
.+||+|||++||+| ++|++
T Consensus 98 ~~gvvIdl~~l~~i-~vd~~ 116 (518)
T 3vte_A 98 VPFVVVDLRNMHSI-KIDVH 116 (518)
T ss_dssp SSEEEEECTTCCCE-EEETT
T ss_pred CCeEEEECCCCcee-EEeCC
Confidence 46899999999998 88875
No 35
>2wdx_A Putative hexose oxidase; oxidoreductase-antibiotic complex, glycopeptide; HET: FAD GHP 3MY 3FG OMY BMA NAG N1L T55; 2.30A {Nonomuraea SP} PDB: 2wdw_A*
Probab=99.38 E-value=8.5e-13 Score=122.61 Aligned_cols=86 Identities=17% Similarity=0.146 Sum_probs=72.2
Q ss_pred ceeecCCCchhHHhhHHhhhhhhccccccCccceEEcCCCHHHHHHHHHHHHhCCCcEEEecCCCCCCCCcccCCCcEEE
Q psy6765 152 VVVLGVPLYDEVIVSASLMNKILNFDELSGKSKLVLKPKTTEEVSAILRYCNEQKIAVCPQGGNTGVVAGGVPLYDEVIV 231 (246)
Q Consensus 152 l~~~~~p~s~~~~~~~~~~~~~~~~~~~~~~p~~vv~P~s~~~v~~~v~~a~~~~~~~~~~ggG~~~~~~~~~~~~gv~i 231 (246)
+.+|.++.|+.. ..+.|+ ..+...|.+|++|++++||+++|++|++++++|.++||||++.+...+.++||+|
T Consensus 34 v~~p~d~~Y~~~------~~~~~n-~~~~~~p~~vv~p~s~~dv~~~v~~a~~~~~~~~v~ggGh~~~g~~~~~~~gvvI 106 (523)
T 2wdx_A 34 KVTPDDPRYLNL------KLRGAN-SRFNGEPDYIHLVGSTQQVADAVEETVRTGKRVAVRSGGHCFEDFVDNPDVKVII 106 (523)
T ss_dssp EECTTSTTHHHH------HTCSSC-TTCCCCCSEEEECSSHHHHHHHHHHHHHHTCCEEEESSCCCSSSSSSSTTCCEEE
T ss_pred EECCCCcchHHH------Hhhhhh-hcccCCCCEEEEeCCHHHHHHHHHHHHHcCCcEEEEcCCCCCCCCccCCCCeEEE
Confidence 577788888765 212333 3567889999999999999999999999999999999999998876655678999
Q ss_pred EcCCcCcceeccCC
Q psy6765 232 SASLMNKILNFDEL 245 (246)
Q Consensus 232 dl~~m~~i~~~d~~ 245 (246)
||++||+| ++|++
T Consensus 107 dl~~m~~i-~~d~~ 119 (523)
T 2wdx_A 107 DMSLLTEI-AYDPS 119 (523)
T ss_dssp ECTTCCCE-EEETT
T ss_pred EcccCCCE-EEcCC
Confidence 99999999 99875
No 36
>2y3s_A TAML; oxidoreductase; HET: FAD TIR; 1.67A {Streptomyces SP} PDB: 2y3r_A* 2y08_A* 2y4g_A*
Probab=99.36 E-value=1.7e-12 Score=120.81 Aligned_cols=87 Identities=16% Similarity=0.138 Sum_probs=73.2
Q ss_pred cCceeecCCCchhHHhhHHhhhhhhccccccCccceEEcCCCHHHHHHHHHHHHhCCCcEEEecCCCCCCCCcccCCCcE
Q psy6765 150 TGVVVLGVPLYDEVIVSASLMNKILNFDELSGKSKLVLKPKTTEEVSAILRYCNEQKIAVCPQGGNTGVVAGGVPLYDEV 229 (246)
Q Consensus 150 ~gl~~~~~p~s~~~~~~~~~~~~~~~~~~~~~~p~~vv~P~s~~~v~~~v~~a~~~~~~~~~~ggG~~~~~~~~~~~~gv 229 (246)
..+.+|.++.|+.. . +.|+ ..+...|.+|++|++++||+++|++|++++++|.++||||++.+......+||
T Consensus 34 ~~v~~p~~~~Y~~~------~-~~~n-~~~~~~p~~vv~p~s~~dv~~~v~~a~~~~~~v~v~ggGh~~~g~~~~~~~gv 105 (530)
T 2y3s_A 34 IDSVAPGDIRYEDL------R-RGEN-LRFVGDPEEIHLVGSAAEIEQVLSRAVRSGKRVAVRSGGHCYEDFVANSDVRV 105 (530)
T ss_dssp CCEECTTSTTHHHH------T-CCSC-TTCCCCCSEEEECCSHHHHHHHHHHHHHTTCCEEEESSCCCSSSTTTCTTCCE
T ss_pred ceEECCCCccHHHH------H-hHhh-hhccCCCCEEEecCCHHHHHHHHHHHHHcCCcEEEECCCCCCCCCcccCCCeE
Confidence 34677888888765 2 2333 35678899999999999999999999999999999999999988666556789
Q ss_pred EEEcCCcCcceeccCC
Q psy6765 230 IVSASLMNKILNFDEL 245 (246)
Q Consensus 230 ~idl~~m~~i~~~d~~ 245 (246)
+|||++||+| ++|++
T Consensus 106 vIdl~~l~~i-~~d~~ 120 (530)
T 2y3s_A 106 VMDMSRLSAV-GFDEE 120 (530)
T ss_dssp EEECTTCCCE-EEETT
T ss_pred EEEcccCCCE-EEcCC
Confidence 9999999999 88875
No 37
>2ipi_A Aclacinomycin oxidoreductase (aknox); anthracycline, flavoenzyme, twinning, MAD; HET: AKY FAD; 1.65A {Streptomyces galilaeus}
Probab=99.36 E-value=1.2e-12 Score=121.52 Aligned_cols=88 Identities=13% Similarity=0.104 Sum_probs=73.5
Q ss_pred cCceeecCCCchhHHhhHHhhhhhhccccccCccceEEcCCCHHHHHHHHHHHHhCCCcEEEecCCCCCCCCcccCCCcE
Q psy6765 150 TGVVVLGVPLYDEVIVSASLMNKILNFDELSGKSKLVLKPKTTEEVSAILRYCNEQKIAVCPQGGNTGVVAGGVPLYDEV 229 (246)
Q Consensus 150 ~gl~~~~~p~s~~~~~~~~~~~~~~~~~~~~~~p~~vv~P~s~~~v~~~v~~a~~~~~~~~~~ggG~~~~~~~~~~~~gv 229 (246)
..+.+|.++.|+.. ..+.|+ ..+...|.+|++|++++||+++|++|++++++|.++||||++.+...+..+||
T Consensus 30 ~~v~~p~d~~Y~~~------~~~~~n-~~~~~~p~~vv~p~s~~dv~~~v~~a~~~~~~~~vrggGh~~~g~~~~~~~gv 102 (521)
T 2ipi_A 30 LVKVDRVDRRYQDL------VTRGFN-GRFRGRPDVVYVVHTADQVVDAVNQAMAAGQRIAVRSGGHCFEGFVDDPAVRA 102 (521)
T ss_dssp CCEEESSSTTHHHH------HTCCSC-TTCCCCCSEEEECSSHHHHHHHHHHHHHHTCCEEEESSCCCTTCGGGCTTCCE
T ss_pred CeEECCCCcchHHH------Hhcccc-ccccCCCCEEEEcCCHHHHHHHHHHHHHcCCeEEEECCCcCCCCCcccCCCeE
Confidence 34688889988765 312333 35678899999999999999999999999999999999999987665556789
Q ss_pred EEEcCCcCcceeccCC
Q psy6765 230 IVSASLMNKILNFDEL 245 (246)
Q Consensus 230 ~idl~~m~~i~~~d~~ 245 (246)
+|||++||+| ++|++
T Consensus 103 vIdl~~l~~i-~~d~~ 117 (521)
T 2ipi_A 103 VIDMSQMRQV-FYDSG 117 (521)
T ss_dssp EEECTTCCCE-EEETT
T ss_pred EEecccCCCe-EEeCC
Confidence 9999999999 88875
No 38
>1wvf_A 4-cresol dehydrogenase [hydroxylating] flavoprote subunit; flavoprotein, electron-transfer, FAD, oxidoreductase; HET: FAD; 1.30A {Pseudomonas putida} SCOP: d.58.32.1 d.145.1.1 PDB: 1wve_A* 1dii_A* 1diq_A*
Probab=99.35 E-value=1.1e-12 Score=121.90 Aligned_cols=67 Identities=24% Similarity=0.392 Sum_probs=60.8
Q ss_pred ccCccceEEcCCCHHHHHHHHHHHHhCCCcEEEecCCCCCC-CCccc-CCCcEEEEcCCcCcceeccCC
Q psy6765 179 LSGKSKLVLKPKTTEEVSAILRYCNEQKIAVCPQGGNTGVV-AGGVP-LYDEVIVSASLMNKILNFDEL 245 (246)
Q Consensus 179 ~~~~p~~vv~P~s~~~v~~~v~~a~~~~~~~~~~ggG~~~~-~~~~~-~~~gv~idl~~m~~i~~~d~~ 245 (246)
+...|++|++|+|++||+++|++|+++++||+|+|+|||+. |++.+ ..+||+|||++||+|+++|++
T Consensus 53 ~~~~p~~vv~P~s~~ev~~~v~~a~~~~~pv~~~g~G~~~~~g~~~~~~~~gvvidl~~m~~i~~id~~ 121 (520)
T 1wvf_A 53 AAHAPSAAVTATTVEQVQGVVKICNEHKIPIWTISTGRNFGYGSAAPVQRGQVILDLKKMNKIIKIDPE 121 (520)
T ss_dssp GGGCCSEEEECCSHHHHHHHHHHHHHHTCCEEEESSCCCTTTTTTSCSSTTCEEEECTTCCCEEEEETT
T ss_pred cCCCCCEEEecCCHHHHHHHHHHHHHCCCcEEEEcCCCCCCCCCCCCCCCCeEEEECCCCCceEEECCC
Confidence 46789999999999999999999999999999999999997 66555 357899999999999999976
No 39
>1f0x_A DLDH, D-lactate dehydrogenase; oxidoreductase; HET: FAD; 1.90A {Escherichia coli} SCOP: d.58.32.2 d.145.1.1
Probab=99.35 E-value=1.8e-12 Score=121.29 Aligned_cols=68 Identities=25% Similarity=0.321 Sum_probs=62.6
Q ss_pred cccCccceEEcCCCHHHHHHHHHHHHhCCCcEEEecCCCCCCCCcccCC-----CcEEEEcCCcCcceeccCC
Q psy6765 178 ELSGKSKLVLKPKTTEEVSAILRYCNEQKIAVCPQGGNTGVVAGGVPLY-----DEVIVSASLMNKILNFDEL 245 (246)
Q Consensus 178 ~~~~~p~~vv~P~s~~~v~~~v~~a~~~~~~~~~~ggG~~~~~~~~~~~-----~gv~idl~~m~~i~~~d~~ 245 (246)
.+...|.+|++|+|++||+++|++|++++++|+|+|||||+.|++.+.. +||+|||++||+|+++|++
T Consensus 41 ~~~~~p~~Vv~P~s~~eV~~iv~~a~~~~~~v~~~GgGt~~~G~~~~~~~~~~r~gvvIdl~rmn~I~~id~~ 113 (571)
T 1f0x_A 41 SGQGDALAVVFPGSLLELWRVLKACVTADKIILMQAANTGLTEGSTPNGNDYDRDVVIISTLRLDKLHVLGKG 113 (571)
T ss_dssp SCBBCCSEEECCSSHHHHHHHHHHHHHTTCEEEEESSCCCSSSTTSCCBSCCSSCEEEEECTTCCCEEEETTT
T ss_pred ccCCCccEEEeeCCHHHHHHHHHHHHHcCCCEEEECCCcCCCCCccCCCcCCcCceEEEECcccCCceeECCC
Confidence 4678999999999999999999999999999999999999999988765 3899999999999999853
No 40
>1zr6_A Glucooligosaccharide oxidase; alpha + beta, flavoenzyme, oxidoreductase; HET: NAG FAD; 1.55A {Acremonium strictum} PDB: 2axr_A* 3e0t_A* 3hsu_A*
Probab=99.33 E-value=2.4e-12 Score=119.10 Aligned_cols=95 Identities=13% Similarity=0.177 Sum_probs=73.3
Q ss_pred HHHHHHHHhhcC--ceeecCCCchhHHhhHHhhhhhhccccccCccceEEcCCCHHHHHHHHHHHHhCCCcEEEecCCCC
Q psy6765 140 VTNRSLELSNTG--VVVLGVPLYDEVIVSASLMNKILNFDELSGKSKLVLKPKTTEEVSAILRYCNEQKIAVCPQGGNTG 217 (246)
Q Consensus 140 ~~~l~~~L~~~g--l~~~~~p~s~~~~~~~~~~~~~~~~~~~~~~p~~vv~P~s~~~v~~~v~~a~~~~~~~~~~ggG~~ 217 (246)
+.+|...|...+ +.+|.++.|... ...|+ ..+...|.+|++|+|++||+++|++|+++++||.++||||+
T Consensus 6 ~~~l~~~l~~~~~~~~~~~~~~y~~~-------~~~~~-~~~~~~p~~vv~p~s~~dv~~~v~~a~~~~~~~~v~ggGh~ 77 (503)
T 1zr6_A 6 FNSINACLAAADVEFHEEDSEGWDMD-------GTAFN-LRVDYDPAAIAIPRSTEDIAAAVQCGLDAGVQISAKGGGHS 77 (503)
T ss_dssp TCHHHHHHHHTTCEECCTTSHHHHHH-------TSCSB-GGGCCCCSEEEECCSHHHHHHHHHHHHHHTCCEEEESSCCC
T ss_pred HHHHHHhhCcCCceecCCCccchHHH-------hhhhh-hcccCCCCEEEEeCCHHHHHHHHHHHHHcCCeEEEECCCcC
Confidence 346777777555 344445444332 22333 34668999999999999999999999999999999999999
Q ss_pred CCCCccc-CCCcEEEEcCCcCcceecc
Q psy6765 218 VVAGGVP-LYDEVIVSASLMNKILNFD 243 (246)
Q Consensus 218 ~~~~~~~-~~~gv~idl~~m~~i~~~d 243 (246)
+.+...+ .++|++|||++||+| ++|
T Consensus 78 ~~~~~~~~~~~gvvIdl~~l~~i-~~d 103 (503)
T 1zr6_A 78 YGSYGFGGEDGHLMLELDRMYRV-SVD 103 (503)
T ss_dssp TTCTTTTSSSSCEEEECTTCCCE-EEC
T ss_pred CCCCcccCCCCcEEEECccCCCE-EEC
Confidence 9875553 456899999999999 888
No 41
>1e8g_A Vanillyl-alcohol oxidase; oxidoreductase, flavoenzyme, specificity; HET: FAD FCR; 2.1A {Penicillium simplicissimum} SCOP: d.58.32.1 d.145.1.1 PDB: 1e8f_A* 1e8h_A* 1qlt_A* 1qlu_A* 1vao_A* 1ahv_A* 1ahz_A* 1ahu_A* 2vao_A* 1w1j_A* 1dzn_A* 1w1l_A* 1e0y_A* 1w1k_A* 1w1m_A*
Probab=99.32 E-value=2.4e-12 Score=120.59 Aligned_cols=68 Identities=16% Similarity=0.270 Sum_probs=61.8
Q ss_pred ccCccceEEcCCCHHHHHHHHHHHHhCCCcEEEecCCCCCC-CCccc-CCCcEEEEc-CCcCcceeccCCC
Q psy6765 179 LSGKSKLVLKPKTTEEVSAILRYCNEQKIAVCPQGGNTGVV-AGGVP-LYDEVIVSA-SLMNKILNFDELS 246 (246)
Q Consensus 179 ~~~~p~~vv~P~s~~~v~~~v~~a~~~~~~~~~~ggG~~~~-~~~~~-~~~gv~idl-~~m~~i~~~d~~~ 246 (246)
+...|.+|++|+|++||+++|++|+++++||+|+|+|||+. |+..+ ..+||+||| ++||+|+++|+++
T Consensus 67 ~~~~p~~Vv~P~s~~eV~~iv~~a~~~~~pv~~~g~Gt~~~~gg~~p~~~~gvvidl~~~mn~il~id~~~ 137 (560)
T 1e8g_A 67 DYFLASAIVAPRNVADVQSIVGLANKFSFPLWPISIGRNSGYGGAAPRVSGSVVLDMGKNMNRVLEVNVEG 137 (560)
T ss_dssp TSSCCSEEECCSSHHHHHHHHHHHHHHTCCEEEESSCCCTTTTTTCCSSTTCEEEECTTTCCCEEEEETTT
T ss_pred cccCCcEEEeCCCHHHHHHHHHHHHHcCCcEEEecCCCcCCcCCCCCCcCCEEEEEchHhcCCeEEEcCCC
Confidence 46789999999999999999999999999999999999997 77665 467999999 9999999999763
No 42
>2uuu_A Alkyldihydroxyacetonephosphate synthase; transferase, lavoprotein, lipid synthesis, peroxisomal disor; HET: FAD PL3; 1.95A {Dictyostelium discoideum} PDB: 2uuv_A*
Probab=99.31 E-value=2.7e-12 Score=120.60 Aligned_cols=68 Identities=24% Similarity=0.436 Sum_probs=61.9
Q ss_pred ccCccceEEcCCCHHHHHHHHHHHHhCCCcEEEecCCCCCCCCcccC---CCcEEEEcCCcCcceeccCCC
Q psy6765 179 LSGKSKLVLKPKTTEEVSAILRYCNEQKIAVCPQGGNTGVVAGGVPL---YDEVIVSASLMNKILNFDELS 246 (246)
Q Consensus 179 ~~~~p~~vv~P~s~~~v~~~v~~a~~~~~~~~~~ggG~~~~~~~~~~---~~gv~idl~~m~~i~~~d~~~ 246 (246)
+...|++|++|+|++||+++|++|+++++||+|+|||||+.|++.+. +++|+|||++||+|+++|+++
T Consensus 134 ~~~~p~~vv~P~s~eeV~~iv~~a~~~~~pv~~~GgGts~~gg~~~~~~~~g~vvidl~~mn~I~~id~~~ 204 (584)
T 2uuu_A 134 VKNAPDLIVLPHSHEEVERLVQLAHKYNVVIIPMGGGSNIVGAIEPVSNERFTVSIDMRRMNKVLWVDRRE 204 (584)
T ss_dssp CCCCCSEEECCCSHHHHHHHHHHHHHHTCEEEEESSCCCSSCTTSCCCCSSCEEEEECTTCCCEEEEETTT
T ss_pred cCCCCCEEEeCCCHHHHHHHHHHHHHcCCeEEEEeCCCCCCCCCcccCCCCCEEEEECCCCCccEEEcCCC
Confidence 45689999999999999999999999999999999999999888875 467999999999999999863
No 43
>2bvf_A 6-hydroxy-D-nicotine oxidase; autoflavinylation, enantiomeric substrates, flavoenzymes, NI degradation; HET: FAD; 1.92A {Arthrobacter nicotinovorans} PDB: 2bvg_A* 2bvh_A*
Probab=99.29 E-value=5.4e-12 Score=115.46 Aligned_cols=84 Identities=15% Similarity=0.268 Sum_probs=69.6
Q ss_pred ceeecCCCchhHHhhHHhhhhhhccccccCccceEEcCCCHHHHHHHHHHHHhCCCcEEEecCCCCCCCCcccCCCcEEE
Q psy6765 152 VVVLGVPLYDEVIVSASLMNKILNFDELSGKSKLVLKPKTTEEVSAILRYCNEQKIAVCPQGGNTGVVAGGVPLYDEVIV 231 (246)
Q Consensus 152 l~~~~~p~s~~~~~~~~~~~~~~~~~~~~~~p~~vv~P~s~~~v~~~v~~a~~~~~~~~~~ggG~~~~~~~~~~~~gv~i 231 (246)
+.+|.++.|+.. . ..|+ ..+...|.+|++|++++||+++|++|++++++|.++||||++.+... ..+|++|
T Consensus 16 v~~p~~~~y~~~------~-~~~~-~~~~~~p~~vv~p~s~~dv~~~v~~a~~~~~~~~v~ggGh~~~~~~~-~~~gvvi 86 (459)
T 2bvf_A 16 VIYPDDSGFDAI------A-NIWD-GRHLQRPSLIARCLSAGDVAKSVRYACDNGLEISVRSGGHNPNGYAT-NDGGIVL 86 (459)
T ss_dssp EECTTSTTHHHH------H-CCSC-TTCCCCCSEEEECCSHHHHHHHHHHHHHHTCCEEEESSCCCTTCTTC-CSSSEEE
T ss_pred EECCCCccHHHH------H-HHhh-hhccCCCCEEEecCCHHHHHHHHHHHHHcCCcEEEEcCCcCCCCccc-cCCeEEE
Confidence 566777777654 2 3343 34668899999999999999999999999999999999999987553 3578999
Q ss_pred EcCCcCcceeccCC
Q psy6765 232 SASLMNKILNFDEL 245 (246)
Q Consensus 232 dl~~m~~i~~~d~~ 245 (246)
||++||+| ++|++
T Consensus 87 ~l~~l~~i-~~d~~ 99 (459)
T 2bvf_A 87 DLRLMNSI-HIDTA 99 (459)
T ss_dssp ECTTCCCE-EEETT
T ss_pred ECCCCCCE-EECCC
Confidence 99999998 88875
No 44
>2exr_A Cytokinin dehydrogenase 7; AT5G21482.1, cytokinin oxidase/dehydrogenase, CKX, structura genomics, protein structure initiative; HET: MSE FAD; 1.70A {Arabidopsis thaliana} PDB: 2q4w_A*
Probab=99.27 E-value=5e-12 Score=117.52 Aligned_cols=64 Identities=16% Similarity=0.277 Sum_probs=58.5
Q ss_pred ccCccceEEcCCCHHHHHHHHHHHHh-CCCcEEEecCCCCCCCCcccCCCcEEEEcCCcCcceeccC
Q psy6765 179 LSGKSKLVLKPKTTEEVSAILRYCNE-QKIAVCPQGGNTGVVAGGVPLYDEVIVSASLMNKILNFDE 244 (246)
Q Consensus 179 ~~~~p~~vv~P~s~~~v~~~v~~a~~-~~~~~~~~ggG~~~~~~~~~~~~gv~idl~~m~~i~~~d~ 244 (246)
+...|.+|++|+|++||+++|++|++ +++||+|+|||||+.|+..+. +||+|||++||+| ++|+
T Consensus 58 ~~~~P~~vv~P~s~eeV~~iv~~a~~~~~~~v~~~GgGts~~g~~~~~-~gvvidl~~m~~i-~i~~ 122 (524)
T 2exr_A 58 NCVKPLAVVRPVGPEDIAGAVKAALRSDKLTVAARGNGHSINGQAMAE-GGLVVDMSTTAEN-HFEV 122 (524)
T ss_dssp CCCCCSEEEECSSHHHHHHHHHHHHHSSSCCEEEESSSCCSSSTTCCT-TSEEEEGGGGTTS-CEEE
T ss_pred ccCCCCEEEecCCHHHHHHHHHHHHhhcCceEEEECCCcCCCCcccCC-CEEEEECcCCCCc-EEee
Confidence 56789999999999999999999996 999999999999999887764 7899999999999 7665
No 45
>1hsk_A UDP-N-acetylenolpyruvoylglucosamine reductase; peptidoglycan synthesis, cell WALL, cell division, oxidoreductase, NADP, flavoprotein, FAD; HET: FAD; 2.30A {Staphylococcus aureus} SCOP: d.145.1.2 d.146.1.1
Probab=99.18 E-value=2.3e-11 Score=106.60 Aligned_cols=70 Identities=17% Similarity=0.420 Sum_probs=60.9
Q ss_pred hhccccccCccceEEcCCCHHHHHHHHHHHHhCCCcEEEecCCCCCCCCcccCCCcEEEEcCCcCcceeccC
Q psy6765 173 ILNFDELSGKSKLVLKPKTTEEVSAILRYCNEQKIAVCPQGGNTGVVAGGVPLYDEVIVSASLMNKILNFDE 244 (246)
Q Consensus 173 ~~~~~~~~~~p~~vv~P~s~~~v~~~v~~a~~~~~~~~~~ggG~~~~~~~~~~~~gv~idl~~m~~i~~~d~ 244 (246)
.|++..+...|++|++|+|++||++++++|+++++|++|+|||||+.++..+. +|++|||++||+| ++|.
T Consensus 39 ~~~t~~~~~~p~~vv~P~s~eev~~~l~~a~~~~~pv~~~GgGtnl~~~~~~~-~gvvI~l~~m~~i-~id~ 108 (326)
T 1hsk_A 39 RYTYTKTGGNADFYITPTKNEEVQAVVKYAYQNEIPVTYLGNGSNIIIREGGI-RGIVISLLSLDHI-EVSD 108 (326)
T ss_dssp GTCTTSCCCEEEEEECCSSHHHHHHHHHHHHHTTCCEEEESSCSSEEECTTCE-EEEEEECTTCCCE-EEET
T ss_pred HhccCCcCCcceEEEEcCCHHHHHHHHHHHHHcCCCEEEECCCCccccCCCCC-CeEEEEeCCCCce-EEcC
Confidence 44445577889999999999999999999999999999999999997665543 5899999999999 8874
No 46
>1w1o_A Cytokinin dehydrogenase 1; flavin, oxidoreductase, flavoprotein, FAD; HET: NAG FAD; 1.7A {Zea mays} SCOP: d.58.32.4 d.145.1.1 PDB: 1w1q_A* 1w1r_A* 1w1s_A* 3dq0_A* 2qkn_A* 3c0p_A* 3bw7_A* 2qpm_A* 3kjm_A*
Probab=99.17 E-value=4.6e-11 Score=111.26 Aligned_cols=67 Identities=18% Similarity=0.241 Sum_probs=60.4
Q ss_pred cccCccceEEcCCCHHHHHHHHHHHHh--C-CCcEEEecCCCCCCCCcccCCCcEEEEcCCcCcc-----eeccCC
Q psy6765 178 ELSGKSKLVLKPKTTEEVSAILRYCNE--Q-KIAVCPQGGNTGVVAGGVPLYDEVIVSASLMNKI-----LNFDEL 245 (246)
Q Consensus 178 ~~~~~p~~vv~P~s~~~v~~~v~~a~~--~-~~~~~~~ggG~~~~~~~~~~~~gv~idl~~m~~i-----~~~d~~ 245 (246)
.+...|.+|++|+|++||+++|++|++ + ++|++|+|||||+.|+..+. +||+|||++||+| +++|++
T Consensus 64 ~~~~~p~~vv~P~s~~ev~~~v~~a~~~~~~~~~v~~~G~G~~~~g~~~~~-~gvvi~l~~m~~i~~~~~~~~d~~ 138 (534)
T 1w1o_A 64 ITSALPAAVLYPSSTGDLVALLSAANSTPGWPYTIAFRGRGHSLMGQAFAP-GGVVVNMASLGDAAAPPRINVSAD 138 (534)
T ss_dssp SCCCCCSEEECCSSHHHHHHHHHHHHHCTTCCCCEEEESSCCCSSSTTCCT-TSEEEEGGGGGCSSSSCSEEECTT
T ss_pred cccCCCCEEEecCCHHHHHHHHHHHHhcCCCCceEEEECCCCCCCCCcCCC-CeEEEECccccccccCccEEEcCC
Confidence 356789999999999999999999998 7 99999999999999877753 7899999999998 888865
No 47
>4feh_A Oxidoreductase DPRE1; alpha+beta, decaprenylphosphoryl-beta-D-RIBO; HET: FAD; 2.04A {Mycobacterium tuberculosis} PDB: 4fdo_A* 4fdn_A* 4fdp_A* 4ff6_A* 4aut_A* 4f4q_A* 4g3t_A 4g3u_A
Probab=99.16 E-value=4.9e-11 Score=109.65 Aligned_cols=71 Identities=11% Similarity=0.100 Sum_probs=62.8
Q ss_pred hccccccCccceEEcCCCHHHHHHHHHHHHhC--CCcEEEecCCCCCCCCcccCCCcEEEEcCCcCcceeccCC
Q psy6765 174 LNFDELSGKSKLVLKPKTTEEVSAILRYCNEQ--KIAVCPQGGNTGVVAGGVPLYDEVIVSASLMNKILNFDEL 245 (246)
Q Consensus 174 ~~~~~~~~~p~~vv~P~s~~~v~~~v~~a~~~--~~~~~~~ggG~~~~~~~~~~~~gv~idl~~m~~i~~~d~~ 245 (246)
.+|..+...|.+|++|+|++||+++|++|+++ +++|.++|+|||+.+...+ .+|++|||++||+|+++|++
T Consensus 34 ~~W~~~~~~p~~vv~P~s~eev~~~v~~a~~~~~~~~v~~~G~G~s~~~~~~~-~~gvvIdl~~l~~i~~~d~~ 106 (481)
T 4feh_A 34 TGWGRTAPSVANVLRTPDAEMIVKAVARVAESGGGRGAIARGLGRSYGDNAQN-GGGLVIDMTPLNTIHSIDAD 106 (481)
T ss_dssp CCTTCCSCEEEEEEECSCHHHHHHHHHHHHTTTCTTCEEEECSSCSSSSTTCC-TTSEEEECTTCCCEEEEETT
T ss_pred ecccCCCCCCCEEEeCCCHHHHHHHHHHHHHcCCCceEEEEeCCcCCCCCCCC-cCeEEEECccCCCceEEcCC
Confidence 34555678999999999999999999999999 7999999999999765543 57899999999999999976
No 48
>3tx1_A UDP-N-acetylenolpyruvoylglucosamine reductase; structural genomics, center for structural genomics of infec diseases, csgid; HET: FAD; 2.69A {Listeria monocytogenes}
Probab=99.05 E-value=2.1e-10 Score=100.22 Aligned_cols=71 Identities=21% Similarity=0.435 Sum_probs=59.5
Q ss_pred hhhccccccCccceEEcCCCHHHHHHHHHHHHhCCCcEEEecCCCCCCCCcccCCCcEEEEcCCcCcceeccC
Q psy6765 172 KILNFDELSGKSKLVLKPKTTEEVSAILRYCNEQKIAVCPQGGNTGVVAGGVPLYDEVIVSASLMNKILNFDE 244 (246)
Q Consensus 172 ~~~~~~~~~~~p~~vv~P~s~~~v~~~v~~a~~~~~~~~~~ggG~~~~~~~~~~~~gv~idl~~m~~i~~~d~ 244 (246)
..|++......|+++++|+|++||++++++|+++++|++|+|+|||+...... .+|++|||++||+| .+|.
T Consensus 44 ~~~tt~~igg~p~~vv~P~s~eev~~~v~~a~~~~~pv~v~GgGsnl~~~~~~-~~gvvI~l~~~~~I-~~d~ 114 (322)
T 3tx1_A 44 SKYTYTKTGGAADVFVMPKTIEEAQEVVAYCHQNKIPLTILGNGSNLIIKDGG-IRGVILHLDLLQTI-ERNN 114 (322)
T ss_dssp GGGSTTSCCCEEEEEEECSSHHHHHHHHHHHHHTTCCEEEESCCTTEEECTTC-EEEEEEECTTCCCE-EEET
T ss_pred HHhccCCcCceeeEEEEeCCHHHHHHHHHHHHHcCCcEEEECCccCCCcCCCC-CCeEEEECCCCCcE-EECC
Confidence 34454567889999999999999999999999999999999999999644322 24899999999998 4654
No 49
>3js8_A Cholesterol oxidase; cholsterol, organic solvent stability, oxygen channel, FAD, flavoprotein, oxidoreductase; HET: FAD SUC; 1.54A {Chromobacterium SP}
Probab=99.03 E-value=2.8e-10 Score=105.42 Aligned_cols=66 Identities=14% Similarity=0.248 Sum_probs=58.2
Q ss_pred cccCccceEEcCCCHHHHHHHHHHHHhCCCcEEEecCCCCCC-----CCcccCCCcEEEEcC-CcCcceeccCC
Q psy6765 178 ELSGKSKLVLKPKTTEEVSAILRYCNEQKIAVCPQGGNTGVV-----AGGVPLYDEVIVSAS-LMNKILNFDEL 245 (246)
Q Consensus 178 ~~~~~p~~vv~P~s~~~v~~~v~~a~~~~~~~~~~ggG~~~~-----~~~~~~~~gv~idl~-~m~~i~~~d~~ 245 (246)
.+...|.+|++|+|++||+++|++|++++++|.++|+|||+. ++. +..+||+|||+ +||+| ++|++
T Consensus 25 ~~~~~P~~vv~P~s~eEV~~~Vk~A~~~~~pv~v~GgGhs~~~l~~~gG~-~~~~GVvIdls~~Ln~I-~vD~~ 96 (540)
T 3js8_A 25 DIKVDDVWTCAPRSADEVVKVANWAKDNGYKVRARGMMHNWSPLTLAAGV-SCPAVVLLDTTRYLTAM-SIDAS 96 (540)
T ss_dssp CCEEEEEEEECCSSHHHHHHHHHHHHHHTCEEEEECSCCCSSCSSCCTTC-SSCSEEEEETTTTCCCE-EEECS
T ss_pred ccCCCccEEEEcCCHHHHHHHHHHHHHcCCeEEEEeCCCCcccccccCCC-CCCCeEEEECcCcCCCE-EECCC
Confidence 456789999999999999999999999999999999999996 444 45678999995 79998 99874
No 50
>2i0k_A Oxidoreductase; MIX alpha beta, covalent FAD, flavoenzyme; HET: FAD; 1.60A {Brevibacterium sterolicum} SCOP: d.58.32.3 d.145.1.1 PDB: 1i19_A*
Probab=99.01 E-value=3.1e-10 Score=106.19 Aligned_cols=66 Identities=20% Similarity=0.349 Sum_probs=57.3
Q ss_pred cccCccceEEcCCCHHHHHHHHHHHHhCCCcEEEecCCCCCCCCccc----CCCcEEEEc-CCcCcceeccC
Q psy6765 178 ELSGKSKLVLKPKTTEEVSAILRYCNEQKIAVCPQGGNTGVVAGGVP----LYDEVIVSA-SLMNKILNFDE 244 (246)
Q Consensus 178 ~~~~~p~~vv~P~s~~~v~~~v~~a~~~~~~~~~~ggG~~~~~~~~~----~~~gv~idl-~~m~~i~~~d~ 244 (246)
.+...|.+|++|+|++||+++|++|+++++++.++|+|||+.+.+.. ..+|++||| ++||+| ++|+
T Consensus 31 ~~~~~p~~vv~P~s~~ev~~~v~~a~~~~~~v~~~G~G~s~~~~~l~~~~~~~~gvvIdl~~~l~~i-~vd~ 101 (561)
T 2i0k_A 31 EIMLDATWVCSPKTPQDVVRLANWAHEHDYKIRPRGAMAGWTPLTVEKGANVEKVILADTMTHLNGI-TVNT 101 (561)
T ss_dssp SSEEEEEEEECCSSHHHHHHHHHHHHHHTCEEEEECCCCCCCTTSSCTTCCCTTEEEEECTTTSCCE-EEEC
T ss_pred ccCCCCCEEEecCCHHHHHHHHHHHHHCCCcEEEECCCCCcccccccCCCcCCCeEEEechhhCCce-EecC
Confidence 56678999999999999999999999999999999999998653222 135799999 899998 9987
No 51
>2vfr_A Xylitol oxidase, alditol oxidase; FAD, sugar, polyol, flavin, flavoprotein, oxidoreductase; HET: FAD; 1.1A {Streptomyces coelicolor} PDB: 2vfs_A* 2vft_A* 2vfu_A* 2vfv_A*
Probab=98.93 E-value=9.2e-10 Score=99.60 Aligned_cols=64 Identities=16% Similarity=0.218 Sum_probs=57.8
Q ss_pred cccCccceEEcCCCHHHHHHHHHHHHhCCCcEEEecCCCCCCCCcccCCCcEEEEcCCcCcceeccCC
Q psy6765 178 ELSGKSKLVLKPKTTEEVSAILRYCNEQKIAVCPQGGNTGVVAGGVPLYDEVIVSASLMNKILNFDEL 245 (246)
Q Consensus 178 ~~~~~p~~vv~P~s~~~v~~~v~~a~~~~~~~~~~ggG~~~~~~~~~~~~gv~idl~~m~~i~~~d~~ 245 (246)
.+...|.+|++|+|++||+++|++| +++.++||||++.+...+..+|++|||++||+|+++|++
T Consensus 16 ~~~~~p~~v~~P~s~~ev~~~v~~a----~~v~~~G~G~s~~~~~~~~~~g~vi~l~~l~~i~~~d~~ 79 (422)
T 2vfr_A 16 NITYTAKELLRPHSLDALRALVADS----ARVRVLGSGHSFNEIAEPGDGGVLLSLAGLPSVVDVDTA 79 (422)
T ss_dssp SCBCSCSSCBCCSSHHHHHHHHHHC----SSEEECSSCCCCSSTTCCCTTCEEECSTTSCCCEEEETT
T ss_pred CccCCCCEEEeCCCHHHHHHHHHhC----CCEEEEECCCCCCCCccCCCCcEEEEhhhCCCcEEEcCC
Confidence 4567899999999999999999999 899999999999887775457899999999999999975
No 52
>1uxy_A MURB, uridine diphospho-N-acetylenolpyruvylglucosamine reductase; peptidoglycan synthesis, cell WALL, cell division, oxidoreductase, NADP; HET: FAD EPU; 1.80A {Escherichia coli} SCOP: d.145.1.2 d.146.1.1 PDB: 1mbb_A* 1mbt_A* 2q85_A* 2mbr_A*
Probab=98.85 E-value=2.5e-09 Score=93.97 Aligned_cols=71 Identities=13% Similarity=0.113 Sum_probs=60.5
Q ss_pred hhhccccccCccceEEcCCCHHHHHHHHHHHHhCCCcEEEecCCCCCCCCcccCCCcEEEEcCCcCcceeccCC
Q psy6765 172 KILNFDELSGKSKLVLKPKTTEEVSAILRYCNEQKIAVCPQGGNTGVVAGGVPLYDEVIVSASLMNKILNFDEL 245 (246)
Q Consensus 172 ~~~~~~~~~~~p~~vv~P~s~~~v~~~v~~a~~~~~~~~~~ggG~~~~~~~~~~~~gv~idl~~m~~i~~~d~~ 245 (246)
..|++....+.|+++++|+|++||++++++|+++++|++++|||||+..... . +|++|+|+ |++|..++++
T Consensus 4 ~~~tt~~igg~a~~~v~p~s~eel~~~l~~a~~~~~pv~vlGgGSnll~~d~-~-~GvVI~l~-~~~i~~i~~~ 74 (340)
T 1uxy_A 4 KPWNTFGIDHNAQHIVCAEDEQQLLNAWQYATAEGQPVLILGEGSNVLFLED-Y-RGTVIINR-IKGIEIHDEP 74 (340)
T ss_dssp GGGSTTCCCCBEEEEEEESSHHHHHHHHHHHHHTTCCEEEESSCTTEEECSC-E-EEEEEEEC-CCCEEEEECS
T ss_pred cccccCCCCccccEEEEeCCHHHHHHHHHHHHHcCCCEEEECCCcCCcccCC-C-CeEEEEcc-CCCcEEEecC
Confidence 4566677888999999999999999999999999999999999999965432 2 58999997 9998766543
No 53
>3i99_A UDP-N-acetylenolpyruvoylglucosamine reductase; structural genomics, center for structural of infectious diseases, csgid; HET: FAD; 2.20A {Vibrio cholerae}
Probab=98.76 E-value=2.2e-09 Score=94.81 Aligned_cols=69 Identities=12% Similarity=0.122 Sum_probs=59.4
Q ss_pred hhhhccccccCccceEEcCCCHHHHHHHHHHHHhCCCcEEEecCCCCCCCCcccCCCcEEEEcCCcCcceecc
Q psy6765 171 NKILNFDELSGKSKLVLKPKTTEEVSAILRYCNEQKIAVCPQGGNTGVVAGGVPLYDEVIVSASLMNKILNFD 243 (246)
Q Consensus 171 ~~~~~~~~~~~~p~~vv~P~s~~~v~~~v~~a~~~~~~~~~~ggG~~~~~~~~~~~~gv~idl~~m~~i~~~d 243 (246)
+..|++...++.|+++++|.|++||++++++|+++++|++++|+|||+..... -+|++|+++ |++| +++
T Consensus 19 L~~~tt~~igg~a~~vv~p~s~eel~~~v~~a~~~~ipv~vlGgGSNll~~d~--~~GvVI~l~-~~~i-~v~ 87 (357)
T 3i99_A 19 LKPYHTFGIEQLAAQLVVAESIDDLKALYCSAEWASLPKLIIGKGSNMLFTCH--YTGMIVVNR-LNGI-EHQ 87 (357)
T ss_dssp SGGGSTTCCSCEEEEEEEECSHHHHHHHHSSSTTTTSCEEEESSCTTEEECSC--EEEEEEEEC-CCCE-EEE
T ss_pred chhhccCCCCccceEEEEECCHHHHHHHHHHHHHcCCCEEEECCCcCcccCCC--CCeEEEEcC-CCce-EEe
Confidence 45566677889999999999999999999999999999999999999964433 248999999 9998 664
No 54
>2gqt_A UDP-N-acetylenolpyruvylglucosamine reductase; peptidoglycan biosynthesis, enolpyruvyl-UDP-N- acetylglucosamine, flavin adenine dinucleotide; HET: FAD; 1.30A {Thermus caldophilus} PDB: 2gqu_A*
Probab=98.64 E-value=2e-08 Score=85.34 Aligned_cols=64 Identities=14% Similarity=0.124 Sum_probs=54.0
Q ss_pred hhhccccccCccceEEcCCCHHHHHHHHHHHHhCCCcEEEecCCCCCCCCcccCCCcEEEEcCCcCcceecc
Q psy6765 172 KILNFDELSGKSKLVLKPKTTEEVSAILRYCNEQKIAVCPQGGNTGVVAGGVPLYDEVIVSASLMNKILNFD 243 (246)
Q Consensus 172 ~~~~~~~~~~~p~~vv~P~s~~~v~~~v~~a~~~~~~~~~~ggG~~~~~~~~~~~~gv~idl~~m~~i~~~d 243 (246)
..|++......|+ +++|+|++||++++ ++|++++|+|||+.....+.++|++|+|++||+| ++|
T Consensus 12 ~~~tt~~igg~a~-vv~p~s~edv~~~v------~ipv~v~GgGsnll~~d~~~~~GvVI~l~~~~~I-~vd 75 (268)
T 2gqt_A 12 KDYTTLGVGGPAE-LWTVETREELKRAT------EAPYRVLGNGSNLLVLDEGVPERVIRLAGEFQTY-DLK 75 (268)
T ss_dssp GGGSSSCCCCEEE-EEEECSHHHHHHHT------TSCEEECSSSSSEEECTTCCSSEEEEECGGGGCB-CTT
T ss_pred HHhcccccCcceE-EEEeCCHHHHHHHh------CCCeEEcCCCcCceecCCCcCCeEEEEcCCCCCc-EEc
Confidence 4555566778889 99999999999999 9999999999999765555555899999999998 565
No 55
>1ffv_C CUTM, flavoprotein of carbon monoxide dehydrogenase; hydrolase; HET: ARO PCD FAD; 2.25A {Hydrogenophaga pseudoflava} SCOP: d.87.2.1 d.145.1.3 PDB: 1ffu_C*
Probab=97.19 E-value=0.00083 Score=57.36 Aligned_cols=71 Identities=14% Similarity=0.006 Sum_probs=54.8
Q ss_pred ccEEEeCCCHHHHHHHHHHHHhCCCcEEEecCCCCCCCCccc--C---CCeEEEecCC---CCCceeeeCCCCeEEEcCC
Q psy6765 66 SKLVLKPKTTEEVSAILRYCNEQKIAVCPQGGNTGVVAGGVP--L---YDEVIVSASL---MNKILNFDELSGNVNSMSN 137 (246)
Q Consensus 66 p~~vv~P~s~~ev~~~v~~a~~~~i~v~~~GgG~~~~g~~~~--~---~~gvvidl~~---m~~i~~id~~~~~v~v~aG 137 (246)
+.-+++|+|.+|+.++++.. +.+..+.||||++ .+. + ..+++||+++ |+.| +. ++..+++++|
T Consensus 5 ~~~~~~P~s~~ea~~ll~~~---~~~~~ilaGGT~l---l~~~~~~~~~~~~lIdl~~i~eL~~i-~~--~~~~l~iGA~ 75 (287)
T 1ffv_C 5 RFEYHAPKSVGEAVALLGQL---GSDAKLLAGGHSL---LPMMKLRFAQPEHLIDINRIPELRGI-RE--EGSTVVIGAM 75 (287)
T ss_dssp CCEEECCSSHHHHHHHHHHH---GGGEEEESSCTTH---HHHHHTTSCCCSEEEECTTCGGGCCE-EE--ETTEEEEETT
T ss_pred cceEECCCCHHHHHHHHHhc---CCCCEEEECchHH---HHHHhcCCCCCCEEEECCCChhhcce-Ee--cCCEEEEccC
Confidence 44689999999999999864 3579999999997 321 2 2379999985 5665 44 3456999999
Q ss_pred ccHHHHHH
Q psy6765 138 ALVTNRSL 145 (246)
Q Consensus 138 ~~~~~l~~ 145 (246)
+++.++.+
T Consensus 76 ~tl~~l~~ 83 (287)
T 1ffv_C 76 TVENDLIS 83 (287)
T ss_dssp CBHHHHHH
T ss_pred CcHHHHhh
Confidence 99999985
No 56
>2yvs_A Glycolate oxidase subunit GLCE; oxidoreductase; 2.00A {Thermus thermophilus}
Probab=96.90 E-value=0.001 Score=54.53 Aligned_cols=51 Identities=12% Similarity=-0.028 Sum_probs=42.6
Q ss_pred eeeeCCCCeEEEcCCccHHHHHHHHhhcCceeecCCCchhHHhhHHhhhhh
Q psy6765 123 LNFDELSGNVNSMSNALVTNRSLELSNTGVVVLGVPLYDEVIVSASLMNKI 173 (246)
Q Consensus 123 ~~id~~~~~v~v~aG~~~~~l~~~L~~~gl~~~~~p~s~~~~~~~~~~~~~ 173 (246)
+++|+++.+++|++|+++.++.+++.++|+.++.+|++...+.++......
T Consensus 1 l~vd~~~~~v~V~aGv~l~~L~~~l~~~Gl~~~~~Pg~~~~tVGG~v~~na 51 (219)
T 2yvs_A 1 MEVHAADQYLVAPGEADLLEVHARLAGTGLFPPFPPVELPGGVGGLVARGG 51 (219)
T ss_dssp CEEETTTTEEEEETTCCHHHHHHHHTTTTEECSSCSEECTTHHHHHHHTTC
T ss_pred CeEcCCCCEEEEcCCCcHHHHHHHHHHcCCEEeccCCCCCCchhheeccCc
Confidence 378999999999999999999999999999999999864336666655433
No 57
>1n62_C Carbon monoxide dehydrogenase medium chain; CODH, molybdenum, molybdopterin, oxidoreductase; HET: CUB MCN FAD; 1.09A {Oligotropha carboxidovorans} SCOP: d.87.2.1 d.145.1.3 PDB: 1n5w_C* 1n61_C* 1n60_C* 1n63_C* 1zxi_C*
Probab=96.47 E-value=0.0054 Score=52.28 Aligned_cols=76 Identities=14% Similarity=0.075 Sum_probs=54.0
Q ss_pred ccEEEeCCCHHHHHHHHHHHHhCCCcEEEecCCCCCCCCcccC---CCeEEEecCCCCCceeeeCCCCeEEEcCCccHHH
Q psy6765 66 SKLVLKPKTTEEVSAILRYCNEQKIAVCPQGGNTGVVAGGVPL---YDEVIVSASLMNKILNFDELSGNVNSMSNALVTN 142 (246)
Q Consensus 66 p~~vv~P~s~~ev~~~v~~a~~~~i~v~~~GgG~~~~g~~~~~---~~gvvidl~~m~~i~~id~~~~~v~v~aG~~~~~ 142 (246)
+.-+++|.|.+|+.++++.. +-+..+.||||++.- .... ..+++||++++.....|..++..+++++++++.+
T Consensus 5 ~~~~~~P~sl~ea~~ll~~~---~~~a~~laGGT~l~~-~~k~~~~~~~~lIdl~~i~eL~~I~~~~~~l~IGA~~t~~~ 80 (288)
T 1n62_C 5 SFDYHRPKSIADAVALLTKL---GEDARPLAGGHSLIP-IMKTRLATPEHLVDLRDIGDLVGIREEGTDVVIGAMTTQHA 80 (288)
T ss_dssp CCEEECCSSHHHHHHHHHHH---GGGEEEESSCTTHHH-HHHTTSCCCSEEEECTTCGGGSCEEEETTEEEEETTCBHHH
T ss_pred ceEEECcCCHHHHHHHHHhc---CCCCEEEECchHHHH-HHhcCCCCCCEEEECCCChhhcceEecCCEEEEccCCcHHH
Confidence 44588999999999988643 346888999999721 1111 2379999987543333333455799999999999
Q ss_pred HHH
Q psy6765 143 RSL 145 (246)
Q Consensus 143 l~~ 145 (246)
+..
T Consensus 81 l~~ 83 (288)
T 1n62_C 81 LIG 83 (288)
T ss_dssp HHH
T ss_pred Hhc
Confidence 984
No 58
>3nvz_B Xanthine dehydrogenase/oxidase; hydroxylase, homodimer, xanthine oxidase, indole-3-aldehyde, oxidoreductase; HET: FAD MTE I3A; 1.60A {Bos taurus} PDB: 3eub_B* 3etr_B* 3ns1_B* 3nrz_B* 3rca_B* 3sr6_B* 3nvw_B* 3nvv_B* 3nvy_B*
Probab=95.96 E-value=0.013 Score=50.36 Aligned_cols=82 Identities=11% Similarity=0.056 Sum_probs=58.2
Q ss_pred CCCccEEEeCCCHHHHHHHHHHHHhCCCcEEEecCCCCCCCCcc-c-CCCeEEEecCCCCCceeeeCCCCeEEEcCCccH
Q psy6765 63 EGKSKLVLKPKTTEEVSAILRYCNEQKIAVCPQGGNTGVVAGGV-P-LYDEVIVSASLMNKILNFDELSGNVNSMSNALV 140 (246)
Q Consensus 63 ~~~p~~vv~P~s~~ev~~~v~~a~~~~i~v~~~GgG~~~~g~~~-~-~~~gvvidl~~m~~i~~id~~~~~v~v~aG~~~ 140 (246)
++.+..+++|.|.+|+.++++- +. ...+.+|||++.-..- . .....+||++++.....|..++..++++++++.
T Consensus 7 ~g~~~~y~~P~sl~ea~~ll~~---~~-~a~~laGGT~l~~~~k~~~~~~~~lIdl~~i~eL~~I~~~~~~l~IGA~vt~ 82 (305)
T 3nvz_B 7 EGERVTWIQASTLKELLDLKAQ---HP-EAKLVVGNTEIGIEMKFKNQLFPMIICPAWIPELNAVEHGPEGISFGAACAL 82 (305)
T ss_dssp ECSSCEEEECCSHHHHHHHHHH---CT-TCEECSSCTTHHHHHHHSCCCCSEEEECTTCGGGGCEEECSSEEEEETTCBH
T ss_pred cCCCeEEEccCCHHHHHHHHHh---CC-CCEEEECccHHHHHHhcCCCCCCEEEECCCChhhcceEECCCeEEEccCCcH
Confidence 5667789999999999887754 22 3578899999831100 0 123689999976544344445667999999999
Q ss_pred HHHHHHHh
Q psy6765 141 TNRSLELS 148 (246)
Q Consensus 141 ~~l~~~L~ 148 (246)
.++.+.+.
T Consensus 83 ~~l~~~~~ 90 (305)
T 3nvz_B 83 SSVEKTLL 90 (305)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHH
Confidence 99988754
No 59
>2w3s_A Xanthine dehydrogenase; XO, XDH, GOUT, iron, 2Fe-2S, iron-sulfur, oxidoreductase, purine metabolism, molybdenum cofactor, hypoxanthine; HET: MPN FAD XAN; 2.60A {Rhodobacter capsulatus} PDB: 2w3r_A* 2w54_A* 2w55_A* 1jro_A* 1jrp_A*
Probab=95.79 E-value=0.0082 Score=54.56 Aligned_cols=78 Identities=12% Similarity=0.028 Sum_probs=54.8
Q ss_pred CCccEEEeCCCHHHHHHHHHHHHhCCCcEEEecCCCCCCCCcccC---CCeEEEecCC---CCCceeeeCCCCeEEEcCC
Q psy6765 64 GKSKLVLKPKTTEEVSAILRYCNEQKIAVCPQGGNTGVVAGGVPL---YDEVIVSASL---MNKILNFDELSGNVNSMSN 137 (246)
Q Consensus 64 ~~p~~vv~P~s~~ev~~~v~~a~~~~i~v~~~GgG~~~~g~~~~~---~~gvvidl~~---m~~i~~id~~~~~v~v~aG 137 (246)
+....+++|.|.+|+.++++... +..+.||||++.- .... ..+++||+++ |+.| +.+ +..++++++
T Consensus 175 G~a~~y~~P~sl~ea~~ll~~~~----~a~ilaGGT~L~~-~~k~~~~~~~~lIdl~~i~eL~~I-~~~--~~~l~IGA~ 246 (462)
T 2w3s_A 175 GQTAPAFLPETSDALADWYLAHP----EATLIAGGTDVSL-WVTKALRDLPEVAFLSHCKDLAQI-RET--PDGYGIGAG 246 (462)
T ss_dssp ----CCBCCSSHHHHHHHHHHCT----TCEEESSCTTTTH-HHHTSCCCCCSEEECTTCGGGSCE-EEE--TTEEEEETT
T ss_pred CCccEEEecCCHHHHHHHHhhCC----CCEEEeCCchhhh-hhhccCCCCCEEEEcCCChhhCcE-EEc--CCEEEEccC
Confidence 44445789999999999987532 5788999999821 1111 2378999988 5665 443 446999999
Q ss_pred ccHHHHHHHHhh
Q psy6765 138 ALVTNRSLELSN 149 (246)
Q Consensus 138 ~~~~~l~~~L~~ 149 (246)
+++.++.+.+.+
T Consensus 247 vtl~~l~~~l~~ 258 (462)
T 2w3s_A 247 VTIAALRAFAEG 258 (462)
T ss_dssp CBHHHHHHHHTT
T ss_pred CcHHHHHHHHHH
Confidence 999999987543
No 60
>3hrd_C Nicotinate dehydrogenase FAD-subunit; selenium ligand, iron, iron-sulfur, metal-binding, oxidoreductase; HET: MCN FAD; 2.20A {Eubacterium barkeri}
Probab=95.30 E-value=0.051 Score=46.37 Aligned_cols=76 Identities=16% Similarity=0.147 Sum_probs=53.9
Q ss_pred ccEEEeCCCHHHHHHHHHHHHhCCC-cEEEecCCCCCCCCccc---CCCeEEEecCCCCCceeeeCCCCeEEEcCCccHH
Q psy6765 66 SKLVLKPKTTEEVSAILRYCNEQKI-AVCPQGGNTGVVAGGVP---LYDEVIVSASLMNKILNFDELSGNVNSMSNALVT 141 (246)
Q Consensus 66 p~~vv~P~s~~ev~~~v~~a~~~~i-~v~~~GgG~~~~g~~~~---~~~gvvidl~~m~~i~~id~~~~~v~v~aG~~~~ 141 (246)
+.-+++|.|.+|..++++ +++- ...+.+|||++.- ... .....+||++++..+..|..++..++++++++..
T Consensus 3 ~f~y~~P~sl~ea~~ll~---~~~~~~a~~laGGT~l~~-~~k~~~~~~~~lIdl~~i~eL~~I~~~~~~l~IGA~vt~~ 78 (296)
T 3hrd_C 3 DFEFFAPKTLEEAKGLLH---QYKDVPPAIIAGGTDLVI-EINDRWEKPDVVIDIKKLKELEYIRVEENTIHIGALSTFT 78 (296)
T ss_dssp CCEEECCSSHHHHHHHHH---HTTTSCCEEESSCTTHHH-HHHTTSCCCSEEEECTTCGGGCCEEECSSEEEEETTCBHH
T ss_pred ceeEeCCCCHHHHHHHHH---hCCCCCeEEEECCcHHHH-HhhcCCCCCCeEEEcccChhhcceEEcCCeEEEccCCcHH
Confidence 445789999999887764 3332 4678899999821 111 1237899999875544444556789999999999
Q ss_pred HHHH
Q psy6765 142 NRSL 145 (246)
Q Consensus 142 ~l~~ 145 (246)
++..
T Consensus 79 ~l~~ 82 (296)
T 3hrd_C 79 QIEN 82 (296)
T ss_dssp HHHH
T ss_pred HHHh
Confidence 9874
No 61
>1t3q_C Quinoline 2-oxidoreductase medium subunit; QOR, molybdenum, MCD; HET: FAD MCN; 1.80A {Pseudomonas putida} SCOP: d.87.2.1 d.145.1.3
Probab=95.22 E-value=0.043 Score=46.63 Aligned_cols=76 Identities=11% Similarity=0.096 Sum_probs=53.2
Q ss_pred ccEEEeCCCHHHHHHHHHHHHhCCCcEEEecCCCCCCCCc-cc-CCCeEEEecCCCCCceeeeCCCCeEEEcCCccHHHH
Q psy6765 66 SKLVLKPKTTEEVSAILRYCNEQKIAVCPQGGNTGVVAGG-VP-LYDEVIVSASLMNKILNFDELSGNVNSMSNALVTNR 143 (246)
Q Consensus 66 p~~vv~P~s~~ev~~~v~~a~~~~i~v~~~GgG~~~~g~~-~~-~~~gvvidl~~m~~i~~id~~~~~v~v~aG~~~~~l 143 (246)
+.-+++|.|.+|+.++++- + -...+.+|||++.-.. .. .....+||++++.+...|..++..+++++++++.++
T Consensus 5 ~f~y~~P~sl~ea~~ll~~---~-~~a~~laGGT~l~~~~k~~~~~~~~lIdl~~i~eL~~I~~~~~~l~IGA~vt~~~l 80 (288)
T 1t3q_C 5 AFSYRAPASLQEVIQVLAD---D-PDARIIAGGQSLLPLLAFRLVYPSCLVDLRNVSELFEISQSAGILSVGAMVTHFRN 80 (288)
T ss_dssp CCEEECCSSHHHHHHHHHH---C-TTCEEESSCTTHHHHHHTTCCCCSEEEECTTCGGGGCEEEETTEEEEETTCBHHHH
T ss_pred CceEECCCCHHHHHHHHhh---C-CCCEEEeCchhHHHHHhcCCCCCCEEEECCCChhhcCeEEcCCEEEEcCCCcHHHH
Confidence 4558899999999998863 2 2367789999962111 00 123689999986544334445567999999999999
Q ss_pred HH
Q psy6765 144 SL 145 (246)
Q Consensus 144 ~~ 145 (246)
.+
T Consensus 81 ~~ 82 (288)
T 1t3q_C 81 KT 82 (288)
T ss_dssp HH
T ss_pred hc
Confidence 86
No 62
>1rm6_B 4-hydroxybenzoyl-COA reductase beta subunit; xanthine oxidase family, dimer heterotrimers, oxidoreductase; HET: PCD FAD SF4 EPE; 1.60A {Thauera aromatica} SCOP: d.87.2.1 d.145.1.3 PDB: 1sb3_B*
Probab=92.32 E-value=0.37 Score=41.59 Aligned_cols=76 Identities=14% Similarity=0.155 Sum_probs=52.4
Q ss_pred ccEEEeCCCHHHHHHHHHHHHhCCCcEEEecCCCCCCCCc-cc-CCCeEEEecCCCCCceeeeCC-CCeEEEcCCccHHH
Q psy6765 66 SKLVLKPKTTEEVSAILRYCNEQKIAVCPQGGNTGVVAGG-VP-LYDEVIVSASLMNKILNFDEL-SGNVNSMSNALVTN 142 (246)
Q Consensus 66 p~~vv~P~s~~ev~~~v~~a~~~~i~v~~~GgG~~~~g~~-~~-~~~gvvidl~~m~~i~~id~~-~~~v~v~aG~~~~~ 142 (246)
|.-+++|.|.+|..++++ +. .-.+.+|||++.-.. .. .....+||++++..+..|..+ +..+++++++++.+
T Consensus 6 ~f~y~~P~sl~ea~~ll~---~~--~a~~lAGGT~l~~~~k~~~~~p~~lIdi~~i~eL~~I~~~~~~~l~IGA~vt~~~ 80 (324)
T 1rm6_B 6 DFRTHRPATLADAVNALA---AE--ATLPLGAGTDLLPNLRRGLGHPAALVDLTGIDGLATISTLADGSLRIGAGATLEA 80 (324)
T ss_dssp CCEEECCSSHHHHHHHTT---ST--TEEEESSCTTHHHHHHTTSCCCSEEEECTTSTTTTCEEECTTSCEEEETTCBHHH
T ss_pred ceEEEccCCHHHHHHHHh---CC--CCEEEECchhHHHHHhccCCCCCEEEECCCChhhcceEECCCCeEEEccCCcHHH
Confidence 345889999999998886 22 477889999872110 00 123789999887544344333 33689999999999
Q ss_pred HHHH
Q psy6765 143 RSLE 146 (246)
Q Consensus 143 l~~~ 146 (246)
+.+.
T Consensus 81 l~~~ 84 (324)
T 1rm6_B 81 IAEH 84 (324)
T ss_dssp HHHC
T ss_pred HHhC
Confidence 8764
No 63
>1ffv_C CUTM, flavoprotein of carbon monoxide dehydrogenase; hydrolase; HET: ARO PCD FAD; 2.25A {Hydrogenophaga pseudoflava} SCOP: d.87.2.1 d.145.1.3 PDB: 1ffu_C*
Probab=87.80 E-value=0.66 Score=39.18 Aligned_cols=57 Identities=14% Similarity=0.031 Sum_probs=40.3
Q ss_pred cceEEcCCCHHHHHHHHHHHHhCCCcEEEecCCCCCCCC--cccCCCcEEEEcCC---cCcceecc
Q psy6765 183 SKLVLKPKTTEEVSAILRYCNEQKIAVCPQGGNTGVVAG--GVPLYDEVIVSASL---MNKILNFD 243 (246)
Q Consensus 183 p~~vv~P~s~~~v~~~v~~a~~~~~~~~~~ggG~~~~~~--~~~~~~gv~idl~~---m~~i~~~d 243 (246)
+...++|+|.+|+.++++.. +.+..+.||||++.-. .-....+++||+++ |+.| +.+
T Consensus 5 ~~~~~~P~s~~ea~~ll~~~---~~~~~ilaGGT~ll~~~~~~~~~~~~lIdl~~i~eL~~i-~~~ 66 (287)
T 1ffv_C 5 RFEYHAPKSVGEAVALLGQL---GSDAKLLAGGHSLLPMMKLRFAQPEHLIDINRIPELRGI-REE 66 (287)
T ss_dssp CCEEECCSSHHHHHHHHHHH---GGGEEEESSCTTHHHHHHTTSCCCSEEEECTTCGGGCCE-EEE
T ss_pred cceEECCCCHHHHHHHHHhc---CCCCEEEECchHHHHHHhcCCCCCCEEEECCCChhhcce-Eec
Confidence 44578999999999998753 4678999999997321 00012479999984 6776 443
No 64
>3unc_A Xanthine dehydrogenase/oxidase; oxidoreductase; HET: MTE FAD SAL; 1.65A {Bos taurus} PDB: 3una_A* 3uni_A* 1v97_A* 1fo4_A* 1vdv_A* 3am9_A* 3amz_A* 3ax7_A* 3ax9_A* 3bdj_A* 1n5x_A* 2ckj_A* 2e1q_A* 3an1_A* 2e3t_A* 1wyg_A* 3b9j_B* 1fiq_B* 3b9j_A* 1fiq_A*
Probab=85.77 E-value=1 Score=46.05 Aligned_cols=80 Identities=10% Similarity=0.071 Sum_probs=56.1
Q ss_pred CCccEEEeCCCHHHHHHHHHHHHhCCCcEEEecCCCCCCCCccc---CCCeEEEecCCCCCceeeeCCCCeEEEcCCccH
Q psy6765 64 GKSKLVLKPKTTEEVSAILRYCNEQKIAVCPQGGNTGVVAGGVP---LYDEVIVSASLMNKILNFDELSGNVNSMSNALV 140 (246)
Q Consensus 64 ~~p~~vv~P~s~~ev~~~v~~a~~~~i~v~~~GgG~~~~g~~~~---~~~gvvidl~~m~~i~~id~~~~~v~v~aG~~~ 140 (246)
+.+.-+++|.|.+|+.++++- +. .-.+.+|||++.- ... .....+||++++.++..|..++..+++++++++
T Consensus 231 ~~~~~~~~P~sl~ea~~ll~~---~~-~a~lvaGgT~l~~-~~k~~~~~~~~lIdl~~i~EL~~I~~~~~~l~IGA~vtl 305 (1332)
T 3unc_A 231 GERVTWIQASTLKELLDLKAQ---HP-EAKLVVGNTEIGI-EMKFKNQLFPMIICPAWIPELNAVEHGPEGISFGAACAL 305 (1332)
T ss_dssp CSSCEEEECCSHHHHHHHHHH---CT-TCEECSSCTTHHH-HHHHSCCCCSEEEECTTCGGGGCEEECSSEEEEETTCBH
T ss_pred CCceEEEccCCHHHHHHHHhh---CC-CCEEEEeCcHHHH-HhhcCCCCCCeEEEcCCCHHhCceEEeCCEEEEEecChH
Confidence 345668999999999887753 21 2467899998721 111 123689999986544444445667999999999
Q ss_pred HHHHHHHh
Q psy6765 141 TNRSLELS 148 (246)
Q Consensus 141 ~~l~~~L~ 148 (246)
.++.+.+.
T Consensus 306 ~~l~~~l~ 313 (1332)
T 3unc_A 306 SSVEKTLL 313 (1332)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHH
Confidence 99988764
No 65
>1n62_C Carbon monoxide dehydrogenase medium chain; CODH, molybdenum, molybdopterin, oxidoreductase; HET: CUB MCN FAD; 1.09A {Oligotropha carboxidovorans} SCOP: d.87.2.1 d.145.1.3 PDB: 1n5w_C* 1n61_C* 1n60_C* 1n63_C* 1zxi_C*
Probab=73.23 E-value=2.4 Score=35.67 Aligned_cols=54 Identities=19% Similarity=0.118 Sum_probs=37.6
Q ss_pred cceEEcCCCHHHHHHHHHHHHhCCCcEEEecCCCCCCCC--cccCCCcEEEEcCC---cCcc
Q psy6765 183 SKLVLKPKTTEEVSAILRYCNEQKIAVCPQGGNTGVVAG--GVPLYDEVIVSASL---MNKI 239 (246)
Q Consensus 183 p~~vv~P~s~~~v~~~v~~a~~~~~~~~~~ggG~~~~~~--~~~~~~gv~idl~~---m~~i 239 (246)
+...++|+|.+|..++++- ++-...+.+|||++.-. .-....+++||+++ |+.|
T Consensus 5 ~~~~~~P~sl~ea~~ll~~---~~~~a~~laGGT~l~~~~k~~~~~~~~lIdl~~i~eL~~I 63 (288)
T 1n62_C 5 SFDYHRPKSIADAVALLTK---LGEDARPLAGGHSLIPIMKTRLATPEHLVDLRDIGDLVGI 63 (288)
T ss_dssp CCEEECCSSHHHHHHHHHH---HGGGEEEESSCTTHHHHHHTTSCCCSEEEECTTCGGGSCE
T ss_pred ceEEECcCCHHHHHHHHHh---cCCCCEEEECchHHHHHHhcCCCCCCEEEECCCChhhcce
Confidence 3457899999999888863 34568889999997321 11123479999986 5665
No 66
>1rzw_A Protein AF2095(GR4); beta-sheet of 4 parallel, anti-parallel beta-strands and 3 alpha-helices, structural genomics, PSI; NMR {Archaeoglobus fulgidus} SCOP: c.131.1.1 PDB: 3erj_A
Probab=69.42 E-value=8.5 Score=28.12 Aligned_cols=38 Identities=29% Similarity=0.340 Sum_probs=32.5
Q ss_pred CCCCccEEEeCCCHHHHHHHHHHHHhCCCcE-EEecCCC
Q psy6765 62 QEGKSKLVLKPKTTEEVSAILRYCNEQKIAV-CPQGGNT 99 (246)
Q Consensus 62 ~~~~p~~vv~P~s~~ev~~~v~~a~~~~i~v-~~~GgG~ 99 (246)
..+.+..|++..+++|+.++.+.|.+.|+|. .++-.|.
T Consensus 45 ~~G~~Kvvlk~~~e~el~~L~~~a~~~gl~~~~I~DAG~ 83 (123)
T 1rzw_A 45 DEGQKKVVLKVKSLEELLGIKHKAESLGLVTGLVQDAGL 83 (123)
T ss_dssp GGCSSEEEEECSCHHHHHHHHHHHHHTTCCEEEECCTTC
T ss_pred HCCCcEEEEecCCHHHHHHHHHHHHHCCCCEEEEECCCC
Confidence 3678999999999999999999999999986 4465554
No 67
>1xty_A PTH, peptidyl-tRNA hydrolase; mixed beta sheet; 1.80A {Pyrococcus abyssi}
Probab=65.78 E-value=11 Score=27.33 Aligned_cols=38 Identities=11% Similarity=0.296 Sum_probs=32.3
Q ss_pred cCCCCccEEEeCCCHHHHHHHHHHHHhCCCcEE-EecCC
Q psy6765 61 TQEGKSKLVLKPKTTEEVSAILRYCNEQKIAVC-PQGGN 98 (246)
Q Consensus 61 ~~~~~p~~vv~P~s~~ev~~~v~~a~~~~i~v~-~~GgG 98 (246)
...+.|..|++..+++|+.++.+.|.+.|+|.. ++=.|
T Consensus 50 ~~~g~~KiVlk~~~e~el~~l~~~a~~~gl~~~~i~DAG 88 (120)
T 1xty_A 50 LHQGQPKIIVKVNSLDEIISRAKKAETMNLPFSIIEDAG 88 (120)
T ss_dssp HHTTCCEEEEEESSHHHHHHHHHHHHHTTCCEEEEECCS
T ss_pred HHCCCcEEEEecCCHHHHHHHHHHHHHCCCCEEEEEcCC
Confidence 347899999999999999999999999999863 45554
No 68
>1wn2_A Peptidyl-tRNA hydrolase; riken structural genomics/proteomics initiative, structural genomics; 1.20A {Pyrococcus horikoshii} PDB: 2d3k_A
Probab=65.25 E-value=11 Score=27.34 Aligned_cols=38 Identities=18% Similarity=0.270 Sum_probs=32.2
Q ss_pred CCCCccEEEeCCCHHHHHHHHHHHHhCCCcEE-EecCCC
Q psy6765 62 QEGKSKLVLKPKTTEEVSAILRYCNEQKIAVC-PQGGNT 99 (246)
Q Consensus 62 ~~~~p~~vv~P~s~~ev~~~v~~a~~~~i~v~-~~GgG~ 99 (246)
..+.|..|++..+++|+.++.+.|.+.|+|.. ++=.|+
T Consensus 52 ~~g~~Kvvlk~~~e~el~~l~~~a~~~gl~~~~i~DAG~ 90 (121)
T 1wn2_A 52 REGQKKVVVKVESEEELFKLKAEAEKLGLPNALIRDAGL 90 (121)
T ss_dssp HTTCCEEEEEESSHHHHHHHHHHHHHTTCCEEEEECTTC
T ss_pred HCCCcEEEEecCCHHHHHHHHHHHHHCCCCEEEEEcCCc
Confidence 57899999999999999999999999999864 454444
No 69
>2w3s_A Xanthine dehydrogenase; XO, XDH, GOUT, iron, 2Fe-2S, iron-sulfur, oxidoreductase, purine metabolism, molybdenum cofactor, hypoxanthine; HET: MPN FAD XAN; 2.60A {Rhodobacter capsulatus} PDB: 2w3r_A* 2w54_A* 2w55_A* 1jro_A* 1jrp_A*
Probab=64.82 E-value=3.8 Score=36.96 Aligned_cols=52 Identities=13% Similarity=0.020 Sum_probs=36.5
Q ss_pred ceEEcCCCHHHHHHHHHHHHhCCCcEEEecCCCCCCCC--cccCCCcEEEEcCC---cCcc
Q psy6765 184 KLVLKPKTTEEVSAILRYCNEQKIAVCPQGGNTGVVAG--GVPLYDEVIVSASL---MNKI 239 (246)
Q Consensus 184 ~~vv~P~s~~~v~~~v~~a~~~~~~~~~~ggG~~~~~~--~~~~~~gv~idl~~---m~~i 239 (246)
...++|.|.+|+.++++.. . ...+.+|||++.-. .-....+++||+++ |+.|
T Consensus 178 ~~y~~P~sl~ea~~ll~~~---~-~a~ilaGGT~L~~~~k~~~~~~~~lIdl~~i~eL~~I 234 (462)
T 2w3s_A 178 APAFLPETSDALADWYLAH---P-EATLIAGGTDVSLWVTKALRDLPEVAFLSHCKDLAQI 234 (462)
T ss_dssp -CCBCCSSHHHHHHHHHHC---T-TCEEESSCTTTTHHHHTSCCCCCSEEECTTCGGGSCE
T ss_pred cEEEecCCHHHHHHHHhhC---C-CCEEEeCCchhhhhhhccCCCCCEEEEcCCChhhCcE
Confidence 4578999999998888753 2 56778999998421 00113479999988 6776
No 70
>3dmy_A Protein FDRA; predicted actyl-COA synthetase, nysgrc, PSI-II, STRU genomics, protein structure initiative; 2.07A {Escherichia coli}
Probab=64.67 E-value=81 Score=28.41 Aligned_cols=89 Identities=15% Similarity=-0.042 Sum_probs=54.2
Q ss_pred EEEcCCccHHHHHHHHhhcCceeec--CCCchh-----HHhhHHhhhhhhccccccCccceEEcCCCHHHHHHHHHHHHh
Q psy6765 132 VNSMSNALVTNRSLELSNTGVVVLG--VPLYDE-----VIVSASLMNKILNFDELSGKSKLVLKPKTTEEVSAILRYCNE 204 (246)
Q Consensus 132 v~v~aG~~~~~l~~~L~~~gl~~~~--~p~s~~-----~~~~~~~~~~~~~~~~~~~~p~~vv~P~s~~~v~~~v~~a~~ 204 (246)
+..+.|.....+...+...|+-|.. .-+... .-++-.+...++..+.........+.+...+...+.++.+++
T Consensus 117 ivSqSGal~~~i~~~~~~~g~G~S~~Vs~Gn~~l~~~i~dv~~~D~l~~l~~Dp~T~~I~ly~E~~~e~~~~~f~~~ar~ 196 (480)
T 3dmy_A 117 VIGASGTGIQELCSQIALAGEGITHAIGLGGRDLSREVGGISALTALEMLSADEKSEVLAFVSKPPAEAVRLKIVNAMKA 196 (480)
T ss_dssp EEESCSHHHHHHHHHHHHTTCCEEEEEECCTTTTSTTTTTHHHHHHHHHHHTCTTCCEEEEEESCCCHHHHHHHHHHHHH
T ss_pred EEeccHHHHHHHHHHHHHcCCCceEEEEcCCCccccccCCCCHHHHHHHHhcCCCCCEEEEEEecCCcHHHHHHHHHHHh
Confidence 6689999999999988877664432 222221 112233345555544333333344445444444678888878
Q ss_pred CCCcEEEecCCCCCCC
Q psy6765 205 QKIAVCPQGGNTGVVA 220 (246)
Q Consensus 205 ~~~~~~~~ggG~~~~~ 220 (246)
.+.||+.+=.|.+-.+
T Consensus 197 ~~KPVV~~k~Grs~~g 212 (480)
T 3dmy_A 197 TGKPTVALFLGYTPAV 212 (480)
T ss_dssp HCSCEEEEETTCCCSS
T ss_pred CCCCEEEEEeCCCCcc
Confidence 8899999988887654
No 71
>1rlk_A Hypothetical protein TA0108; structural genomics, conserved hypothetical protein, PSI, PR structure initiative; HET: SO4; 1.95A {Thermoplasma acidophilum} SCOP: c.131.1.1
Probab=64.38 E-value=9.1 Score=27.60 Aligned_cols=38 Identities=26% Similarity=0.327 Sum_probs=32.2
Q ss_pred CCCCccEEEeCCCHHHHHHHHHHHHhCCCcEE-EecCCC
Q psy6765 62 QEGKSKLVLKPKTTEEVSAILRYCNEQKIAVC-PQGGNT 99 (246)
Q Consensus 62 ~~~~p~~vv~P~s~~ev~~~v~~a~~~~i~v~-~~GgG~ 99 (246)
..+.|..|++..+++|+.++.+.|.+.|+|.. ++-.|+
T Consensus 48 ~~g~~kiVlk~~~e~~l~~l~~~a~~~gl~~~~v~DAG~ 86 (117)
T 1rlk_A 48 DEGQRKIVVKVNDLDEIMEIKRMADSMGIVNEIVQDRGY 86 (117)
T ss_dssp HTTCCEEEEEESSHHHHHHHHHHHHHHTCCEEEEECCCS
T ss_pred HCCCeEEEEecCCHHHHHHHHHHHHHCCCCEEEEEeCCc
Confidence 57899999999999999999999999999863 454443
No 72
>1vkm_A Conserved hypothetical protein TM1464; indigoidine synthase A-like fold, structural genomics, joint for structural genomics, JCSG; HET: MSE UNL; 1.90A {Thermotoga maritima} SCOP: c.138.1.1
Probab=64.16 E-value=12 Score=31.54 Aligned_cols=107 Identities=21% Similarity=0.205 Sum_probs=63.1
Q ss_pred HHHHHHHHHhCCCcEEEecCCCCCCCCcccCCCeEEEecCCCCCceeeeCCCCeEEEcCCccH----HHHHHHHhhcCce
Q psy6765 78 VSAILRYCNEQKIAVCPQGGNTGVVAGGVPLYDEVIVSASLMNKILNFDELSGNVNSMSNALV----TNRSLELSNTGVV 153 (246)
Q Consensus 78 v~~~v~~a~~~~i~v~~~GgG~~~~g~~~~~~~gvvidl~~m~~i~~id~~~~~v~v~aG~~~----~~l~~~L~~~gl~ 153 (246)
|+..+.+|+..||+|++-||==+..-+ + -.|-=||..|.+ .....|.+|+.. ..-.++|..+|+.
T Consensus 109 VaaTm~lA~~AGI~VFaTGGiGGVHRg--t--~DISaDL~eL~r-------TpV~VVcaG~KsILDi~~TLE~LET~GV~ 177 (297)
T 1vkm_A 109 VSATIFLSRRIGIEVVVTGGTGGVHPG--R--VDVSQDLTEMSS-------SRAVLVSSGIKSILDVEATFEMLETLEIP 177 (297)
T ss_dssp HHHHHHHHHHHTCCEEECSCBCCBCTT--S--SCBCHHHHHHTT-------CCEEEEESBBCTTSCHHHHHHHHHHTTCC
T ss_pred HHHHHHHHHHcCCcEEEecccccccCC--C--cccchhHHHhcC-------CCeEEEecccchhhcchhHHHHHHhCCce
Confidence 788999999999999997753333221 0 012223333333 345667777764 3344677788886
Q ss_pred eecCCCchhHHhhHHhhhhhhccccccCccceEEcCCCHHHHHHHHHHHHhCCC
Q psy6765 154 VLGVPLYDEVIVSASLMNKILNFDELSGKSKLVLKPKTTEEVSAILRYCNEQKI 207 (246)
Q Consensus 154 ~~~~p~s~~~~~~~~~~~~~~~~~~~~~~p~~vv~P~s~~~v~~~v~~a~~~~~ 207 (246)
+-..-. +.. -.+|+..+ +.... +-.+++|++++++.-++.++
T Consensus 178 Vvgy~t-~~f-------PaF~tr~S-g~~~p---~~d~~~e~A~~~~~~~~lgl 219 (297)
T 1vkm_A 178 LVGFRT-NEF-------PLFFSRKS-GRRVP---RIENVEEVLKIYESMKEMEL 219 (297)
T ss_dssp EEEESC-SBC-------CBTTBSCC-SCBCC---EECSHHHHHHHHHHHHHTTC
T ss_pred EEEecC-CCC-------CceecCCC-CCcCC---CCCCHHHHHHHHHHHHHhCC
Confidence 654321 111 13554332 22222 55789999999998777654
No 73
>2zv3_A PTH, peptidyl-tRNA hydrolase; cytoplasm, structural genomics, NPPSFA; 2.10A {Methanocaldococcus jannaschii}
Probab=62.21 E-value=9 Score=27.52 Aligned_cols=37 Identities=19% Similarity=0.348 Sum_probs=31.5
Q ss_pred CCCCccEEEeCCCHHHHHHHHHHHHhCCCcEE-EecCC
Q psy6765 62 QEGKSKLVLKPKTTEEVSAILRYCNEQKIAVC-PQGGN 98 (246)
Q Consensus 62 ~~~~p~~vv~P~s~~ev~~~v~~a~~~~i~v~-~~GgG 98 (246)
..+.|..|++..+++|+.++.+.|.+.|+|.. ++-.|
T Consensus 46 ~~g~~kivlk~~~e~~l~~l~~~a~~~gl~~~~i~DAG 83 (115)
T 2zv3_A 46 REGQKKVVVKVNSEKELIDIYNKARSEGLPCSIIRDAG 83 (115)
T ss_dssp HTTCCEEEEEESSHHHHHHHHHHHHHHTCCEEEEEECC
T ss_pred HCCCeEEEEecCCHHHHHHHHHHHHHcCCCEEEEEeCC
Confidence 57899999999999999999999999999863 34444
No 74
>3zyv_A AOH1; oxidoreductase, molybdenum cofactor; HET: MTE FAD; 2.54A {Mus musculus}
Probab=58.29 E-value=9.6 Score=39.02 Aligned_cols=78 Identities=13% Similarity=0.051 Sum_probs=53.3
Q ss_pred cEEEeCCCHHHHHHHHHHHHhCCCcEEEecCCCCCCCCccc---CCCeEEEecCCCCCceeeeCCCCeEEEcCCccHHHH
Q psy6765 67 KLVLKPKTTEEVSAILRYCNEQKIAVCPQGGNTGVVAGGVP---LYDEVIVSASLMNKILNFDELSGNVNSMSNALVTNR 143 (246)
Q Consensus 67 ~~vv~P~s~~ev~~~v~~a~~~~i~v~~~GgG~~~~g~~~~---~~~gvvidl~~m~~i~~id~~~~~v~v~aG~~~~~l 143 (246)
...++|.|.+|+.++..--.+ - .+..|+|.+ |=-.. ....++|++.+..++..+..++..+++++++++.++
T Consensus 241 ~~w~~P~tl~el~~l~~~~p~--a--~lvaGnT~~-gl~~~~~~~~~~~~I~~~~v~EL~~i~~~~~~l~IGA~vtls~~ 315 (1335)
T 3zyv_A 241 TTWIAPGTLNDLLELKMKHPS--A--PLVIGNTYL-GLHMKFTDVSYPIIISPARILELFVVTNTKQGLTLGTGLSLTQV 315 (1335)
T ss_dssp CEEEECSSHHHHHHHHHHCTT--S--CBCSSCTTH-HHHHC--CCCCSEEECCTTCGGGSCEECCTTEEEEETTCBHHHH
T ss_pred ceEecCCCHHHHHHHHHHCCC--C--eEEEecccc-eeeEeecCCCCCeEEEcCcchhHheEEecCCEEEEcccCcHHHH
Confidence 447899999999887543222 2 245677776 11111 123689998876655555566677999999999999
Q ss_pred HHHHhh
Q psy6765 144 SLELSN 149 (246)
Q Consensus 144 ~~~L~~ 149 (246)
.+.|.+
T Consensus 316 ~~~l~~ 321 (1335)
T 3zyv_A 316 KNVLSD 321 (1335)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 988865
No 75
>3ff4_A Uncharacterized protein; structural genomics, PSI- protein structure initiative, midwest center for structural genomics, MCSG; 2.10A {Cytophaga hutchinsonii atcc 33406}
Probab=54.45 E-value=18 Score=26.06 Aligned_cols=81 Identities=12% Similarity=-0.074 Sum_probs=53.5
Q ss_pred eEEEcCCcc----HHHHHHHHhhcCc-eeecCCCchhHHhhHHhhhhhhccccccCccceEEcCCCHHHHHHHHHHHHhC
Q psy6765 131 NVNSMSNAL----VTNRSLELSNTGV-VVLGVPLYDEVIVSASLMNKILNFDELSGKSKLVLKPKTTEEVSAILRYCNEQ 205 (246)
Q Consensus 131 ~v~v~aG~~----~~~l~~~L~~~gl-~~~~~p~s~~~~~~~~~~~~~~~~~~~~~~p~~vv~P~s~~~v~~~v~~a~~~ 205 (246)
.+.+++... ...+.+.|.++|+ .+|..|.++.. .+ ..-|-+-..... +|.++.-...+.+.++++.|.+.
T Consensus 7 iAVVGaS~~~~~~g~~v~~~L~~~g~~V~pVnP~~~~i--~G--~~~y~sl~dlp~-vDlavi~~p~~~v~~~v~e~~~~ 81 (122)
T 3ff4_A 7 TLILGATPETNRYAYLAAERLKSHGHEFIPVGRKKGEV--LG--KTIINERPVIEG-VDTVTLYINPQNQLSEYNYILSL 81 (122)
T ss_dssp EEEETCCSCTTSHHHHHHHHHHHHTCCEEEESSSCSEE--TT--EECBCSCCCCTT-CCEEEECSCHHHHGGGHHHHHHH
T ss_pred EEEEccCCCCCCHHHHHHHHHHHCCCeEEEECCCCCcC--CC--eeccCChHHCCC-CCEEEEEeCHHHHHHHHHHHHhc
Confidence 455665443 3456667766664 66777776543 00 011223334456 99999999999999999999999
Q ss_pred CCcEEEecCCC
Q psy6765 206 KIAVCPQGGNT 216 (246)
Q Consensus 206 ~~~~~~~ggG~ 216 (246)
+++.+....|.
T Consensus 82 g~k~v~~~~G~ 92 (122)
T 3ff4_A 82 KPKRVIFNPGT 92 (122)
T ss_dssp CCSEEEECTTC
T ss_pred CCCEEEECCCC
Confidence 98877776664
No 76
>1yht_A DSPB; beta barrel, hydrolase; 2.00A {Aggregatibacter actinomycetemcomitans} SCOP: c.1.8.6
Probab=53.99 E-value=8.9 Score=33.35 Aligned_cols=29 Identities=17% Similarity=0.282 Sum_probs=24.8
Q ss_pred CCHHHHHHHHHHHHhCCCcEEE--ecCCCCC
Q psy6765 73 KTTEEVSAILRYCNEQKIAVCP--QGGNTGV 101 (246)
Q Consensus 73 ~s~~ev~~~v~~a~~~~i~v~~--~GgG~~~ 101 (246)
-|.+|+.+++++|++++|.|+| --=||..
T Consensus 92 YT~~di~eiv~YA~~rgI~VIPEID~PGH~~ 122 (367)
T 1yht_A 92 LSYRQLDDIKAYAKAKGIELIPELDSPNHMT 122 (367)
T ss_dssp BCHHHHHHHHHHHHHTTCEEEEEEEESSSCH
T ss_pred cCHHHHHHHHHHHHHcCCEEEEeccchHHHH
Confidence 5899999999999999999998 3556654
No 77
>1y81_A Conserved hypothetical protein; hyperthermophIle, structural genomics, PSI, protein structure initiative; HET: COA; 1.70A {Pyrococcus furiosus} SCOP: c.2.1.8
Probab=53.55 E-value=62 Score=23.53 Aligned_cols=78 Identities=14% Similarity=0.019 Sum_probs=50.7
Q ss_pred CeEEEcC----CccHHHHHHHHhhcCc-eeecCCCchhHHhhHHhhhhhh-ccccccCccceEEcCCCHHHHHHHHHHHH
Q psy6765 130 GNVNSMS----NALVTNRSLELSNTGV-VVLGVPLYDEVIVSASLMNKIL-NFDELSGKSKLVLKPKTTEEVSAILRYCN 203 (246)
Q Consensus 130 ~~v~v~a----G~~~~~l~~~L~~~gl-~~~~~p~s~~~~~~~~~~~~~~-~~~~~~~~p~~vv~P~s~~~v~~~v~~a~ 203 (246)
..+.+++ |..-..+.+.|.+.|+ .++..|..... .+ ...| +-.+....++.++.....+.+.++++.|.
T Consensus 16 ~IavIGaS~~~g~~G~~~~~~L~~~G~~V~~vnp~~~~i--~G---~~~~~s~~el~~~vDlvii~vp~~~v~~v~~~~~ 90 (138)
T 1y81_A 16 KIALVGASKNPAKYGNIILKDLLSKGFEVLPVNPNYDEI--EG---LKCYRSVRELPKDVDVIVFVVPPKVGLQVAKEAV 90 (138)
T ss_dssp EEEEETCCSCTTSHHHHHHHHHHHTTCEEEEECTTCSEE--TT---EECBSSGGGSCTTCCEEEECSCHHHHHHHHHHHH
T ss_pred eEEEEeecCCCCCHHHHHHHHHHHCCCEEEEeCCCCCeE--CC---eeecCCHHHhCCCCCEEEEEeCHHHHHHHHHHHH
Confidence 4566777 7777777787877775 55666765322 00 1122 22334456788888778899999999888
Q ss_pred hCCCcEEEe
Q psy6765 204 EQKIAVCPQ 212 (246)
Q Consensus 204 ~~~~~~~~~ 212 (246)
+.+++.+..
T Consensus 91 ~~g~~~i~~ 99 (138)
T 1y81_A 91 EAGFKKLWF 99 (138)
T ss_dssp HTTCCEEEE
T ss_pred HcCCCEEEE
Confidence 888764443
No 78
>2nu8_A Succinyl-COA ligase [ADP-forming] subunit alpha; citric acid cycle, heterotetramer, ligase, ATP-grAsp fold, R fold; HET: COA; 2.15A {Escherichia coli} SCOP: c.2.1.8 c.23.4.1 PDB: 2nu9_A* 2nu7_A* 2nua_A* 2nu6_A* 2scu_A* 1jll_A* 1scu_A* 1jkj_A* 1cqj_A* 1cqi_A*
Probab=52.81 E-value=53 Score=27.22 Aligned_cols=145 Identities=12% Similarity=-0.005 Sum_probs=75.7
Q ss_pred CCCccEEEeCC--CHHHHHHHHHHHHhCCCcEEEecCCCCCCCCcccCCCeEEEecCCCCCceeeeCCCCeEEEcCCccH
Q psy6765 63 EGKSKLVLKPK--TTEEVSAILRYCNEQKIAVCPQGGNTGVVAGGVPLYDEVIVSASLMNKILNFDELSGNVNSMSNALV 140 (246)
Q Consensus 63 ~~~p~~vv~P~--s~~ev~~~v~~a~~~~i~v~~~GgG~~~~g~~~~~~~gvvidl~~m~~i~~id~~~~~v~v~aG~~~ 140 (246)
.+.+.+|+.+. +.+|..++++.|+++++.+ .| .|.-|-..| ..+..-.+.. .+ ..+..--+..+.|...
T Consensus 87 ~Gi~~iVi~t~G~~~~~~~~l~~~A~~~gv~l--iG--PNc~Gi~~p-~~~~~~~~~~--~~--~~~G~i~~vsqSG~l~ 157 (288)
T 2nu8_A 87 AGIKLIITITEGIPTLDMLTVKVKLDEAGVRM--IG--PNTPGVITP-GECKIGIQPG--HI--HKPGKVGIVSRSGTLT 157 (288)
T ss_dssp TTCSEEEECCCCCCHHHHHHHHHHHHHHTCEE--EC--SSCCEEEET-TTEEEESSCT--TS--CCEEEEEEEESCHHHH
T ss_pred CCCCEEEEECCCCCHHHHHHHHHHHHHcCCEE--Ee--cCCcceecC-CcceeEeccc--CC--CCCCCEEEEECcHHHH
Confidence 34555566665 6788889999999988754 33 333332332 2222221111 11 1122222557889888
Q ss_pred HHHHHHHhhcCceeec--CCCchhH-HhhHHhhhhhhccccccCccceEEcC-CCHH-HHHHHHHHHHhCCCcEEEecCC
Q psy6765 141 TNRSLELSNTGVVVLG--VPLYDEV-IVSASLMNKILNFDELSGKSKLVLKP-KTTE-EVSAILRYCNEQKIAVCPQGGN 215 (246)
Q Consensus 141 ~~l~~~L~~~gl~~~~--~p~s~~~-~~~~~~~~~~~~~~~~~~~p~~vv~P-~s~~-~v~~~v~~a~~~~~~~~~~ggG 215 (246)
..+...+...|+-+.. .-+.+.. -++-.+...++..+...........+ .+.+ +..+.++. ..+.|++.+=.|
T Consensus 158 ~~~~~~~~~~g~G~s~~vs~G~~~~~~~~~~d~l~~l~~D~~t~~I~l~~E~~~~~~~~~~~~~~~--~~~KPVv~~k~G 235 (288)
T 2nu8_A 158 YEAVKQTTDYGFGQSTCVGIGGDPIPGSNFIDILEMFEKDPQTEAIVMIGEIGGSAEEEAAAYIKE--HVTKPVVGYIAG 235 (288)
T ss_dssp HHHHHHHHHTTCCEEEEEECCSSSSCSSCHHHHHHHHHTCTTCCEEEEEEESSSSHHHHHHHHHHH--HCCSCEEEEEEC
T ss_pred HHHHHHHHhcCCCEEEEEeeCCCcCCCCCHHHHHHHHhcCCCCCEEEEEEeeCCCHHHHHHHHHHh--cCCCCEEEEEeC
Confidence 8888888776664431 1111110 12223345566544333333333443 2444 44556664 567888887666
Q ss_pred CCC
Q psy6765 216 TGV 218 (246)
Q Consensus 216 ~~~ 218 (246)
.+-
T Consensus 236 ~~~ 238 (288)
T 2nu8_A 236 VTA 238 (288)
T ss_dssp TTC
T ss_pred CCC
Confidence 555
No 79
>2d59_A Hypothetical protein PH1109; COA binding, structural genomics; 1.65A {Pyrococcus horikoshii} SCOP: c.2.1.8 PDB: 2d5a_A* 2e6u_X* 3qa9_A 3q9n_A* 3q9u_A*
Probab=52.68 E-value=56 Score=23.89 Aligned_cols=81 Identities=15% Similarity=-0.035 Sum_probs=47.9
Q ss_pred CeEEEcCC----ccHHHHHHHHhhcCc-eeecCCCchhHHhhHHhhhhhh-ccccccCccceEEcCCCHHHHHHHHHHHH
Q psy6765 130 GNVNSMSN----ALVTNRSLELSNTGV-VVLGVPLYDEVIVSASLMNKIL-NFDELSGKSKLVLKPKTTEEVSAILRYCN 203 (246)
Q Consensus 130 ~~v~v~aG----~~~~~l~~~L~~~gl-~~~~~p~s~~~~~~~~~~~~~~-~~~~~~~~p~~vv~P~s~~~v~~~v~~a~ 203 (246)
..+.++++ .....+.+.|.+.|+ .++..|..... .+ ...| +-......++.++.....+.+.++++.|.
T Consensus 24 ~iaVVGas~~~g~~G~~~~~~l~~~G~~v~~Vnp~~~~i--~G---~~~y~sl~~l~~~vDlvvi~vp~~~~~~vv~~~~ 98 (144)
T 2d59_A 24 KIALVGASPKPERDANIVMKYLLEHGYDVYPVNPKYEEV--LG---RKCYPSVLDIPDKIEVVDLFVKPKLTMEYVEQAI 98 (144)
T ss_dssp EEEEETCCSCTTSHHHHHHHHHHHTTCEEEEECTTCSEE--TT---EECBSSGGGCSSCCSEEEECSCHHHHHHHHHHHH
T ss_pred EEEEEccCCCCCchHHHHHHHHHHCCCEEEEECCCCCeE--CC---eeccCCHHHcCCCCCEEEEEeCHHHHHHHHHHHH
Confidence 45667764 334455566666554 55556654221 00 1112 22233446788888888899999999888
Q ss_pred hCCCcEEEecCC
Q psy6765 204 EQKIAVCPQGGN 215 (246)
Q Consensus 204 ~~~~~~~~~ggG 215 (246)
+.+++.+....|
T Consensus 99 ~~gi~~i~~~~g 110 (144)
T 2d59_A 99 KKGAKVVWFQYN 110 (144)
T ss_dssp HHTCSEEEECTT
T ss_pred HcCCCEEEECCC
Confidence 888876555433
No 80
>3k5i_A Phosphoribosyl-aminoimidazole carboxylase; purine biosynthesis, ATP-grAsp, lyase; HET: NHE ADP AIR; 2.00A {Aspergillus clavatus} PDB: 3k5h_A*
Probab=51.66 E-value=45 Score=28.94 Aligned_cols=133 Identities=11% Similarity=-0.021 Sum_probs=66.4
Q ss_pred HHHHHHHHHHHhCCCcEEEecCCCCCCCCcccCC-CeEEEecCCCCCceeeeCCCCeEEEcCCccHHHHHHHHhhcCcee
Q psy6765 76 EEVSAILRYCNEQKIAVCPQGGNTGVVAGGVPLY-DEVIVSASLMNKILNFDELSGNVNSMSNALVTNRSLELSNTGVVV 154 (246)
Q Consensus 76 ~ev~~~v~~a~~~~i~v~~~GgG~~~~g~~~~~~-~gvvidl~~m~~i~~id~~~~~v~v~aG~~~~~l~~~L~~~gl~~ 154 (246)
+--..+++.|++.|+.+++....... ...+.+. .-++.++.....+.++-.....++.+.-....++.+.|.+ |+.+
T Consensus 34 ~lg~~l~~aa~~lG~~v~~~d~~~~p-~~~~ad~~~~~~~~~~d~~~l~~~a~~~d~i~~e~e~~~~~~l~~l~~-g~~v 111 (403)
T 3k5i_A 34 QLGRMLVESANRLNIQVNVLDADNSP-AKQISAHDGHVTGSFKEREAVRQLAKTCDVVTAEIEHVDTYALEEVAS-EVKI 111 (403)
T ss_dssp HHHHHHHHHHHHHTCEEEEEESTTCT-TGGGCCSSCCEESCTTCHHHHHHHHTTCSEEEESSSCSCHHHHHHHTT-TSEE
T ss_pred HHHHHHHHHHHHCCCEEEEEECCCCc-HHHhccccceeecCCCCHHHHHHHHHhCCEEEECCCCCCHHHHHHHHc-CCcc
Confidence 44566778888899998887622222 1122221 2334444332233233223345666666666777788887 7653
Q ss_pred ecCCCchhHHhhHHhhhhhhccccccCccceEEcCCCHHHHHHHHHHHHhCCCcEEEec
Q psy6765 155 LGVPLYDEVIVSASLMNKILNFDELSGKSKLVLKPKTTEEVSAILRYCNEQKIAVCPQG 213 (246)
Q Consensus 155 ~~~p~s~~~~~~~~~~~~~~~~~~~~~~p~~vv~P~s~~~v~~~v~~a~~~~~~~~~~g 213 (246)
.+++..-..+.|=...............|..++.+.+.+++.+ ++.+.+.|++.+-
T Consensus 112 ~p~~~a~~~~~dK~~~k~~l~~~Gip~p~~~~~~~~~~~~~~~---~~~~~g~P~VvKp 167 (403)
T 3k5i_A 112 EPSWQAIRTIQNKFNQKEHLRKYGIPMAEHRELVENTPAELAK---VGEQLGYPLMLKS 167 (403)
T ss_dssp SSCHHHHHHHTSHHHHHHHHHTTTCCBCCEEEESSCCHHHHHH---HHHHHCSSEEEEE
T ss_pred CcCHHHHHHhcCHHHHHHHHHHCCcCCCCEEEEcCCCHHHHHH---HHHHhCCCEEEEe
Confidence 3333222221111111111111123334455666667777655 4456677877664
No 81
>1q7s_A BIT1, protein CGI-147; apoptosis; 2.00A {Homo sapiens} SCOP: c.131.1.1
Probab=51.48 E-value=20 Score=25.71 Aligned_cols=36 Identities=25% Similarity=0.292 Sum_probs=30.4
Q ss_pred CCCccEEEeCCCHHHHHHHHHHHHhCCCcE-EEecCC
Q psy6765 63 EGKSKLVLKPKTTEEVSAILRYCNEQKIAV-CPQGGN 98 (246)
Q Consensus 63 ~~~p~~vv~P~s~~ev~~~v~~a~~~~i~v-~~~GgG 98 (246)
.+.|..+++..+++|+.++.+.|.+.|+|. .++=.|
T Consensus 49 ~g~~KVvlk~~~e~~l~~l~~~a~~~gl~~~~i~DAG 85 (117)
T 1q7s_A 49 CGQPKVVVKAPDEETLIALLAHAKMLGLTVSLIQDAG 85 (117)
T ss_dssp TTCCEEEEEESSHHHHHHHHHHHHHTTCCEEEEEECS
T ss_pred CCCeeEEEEcCCHHHHHHHHHHHHHCCCCEEEEEECC
Confidence 677999999999999999999999999985 334443
No 82
>1yht_A DSPB; beta barrel, hydrolase; 2.00A {Aggregatibacter actinomycetemcomitans} SCOP: c.1.8.6
Probab=49.75 E-value=11 Score=32.66 Aligned_cols=28 Identities=18% Similarity=0.326 Sum_probs=23.6
Q ss_pred CHHHHHHHHHHHHhCCCcEEEe--cCCCCC
Q psy6765 191 TTEEVSAILRYCNEQKIAVCPQ--GGNTGV 218 (246)
Q Consensus 191 s~~~v~~~v~~a~~~~~~~~~~--ggG~~~ 218 (246)
|.+|+.+++++|++++|.|+|- .=||..
T Consensus 93 T~~di~eiv~YA~~rgI~VIPEID~PGH~~ 122 (367)
T 1yht_A 93 SYRQLDDIKAYAKAKGIELIPELDSPNHMT 122 (367)
T ss_dssp CHHHHHHHHHHHHHTTCEEEEEEEESSSCH
T ss_pred CHHHHHHHHHHHHHcCCEEEEeccchHHHH
Confidence 8899999999999999999985 235544
No 83
>3hrd_C Nicotinate dehydrogenase FAD-subunit; selenium ligand, iron, iron-sulfur, metal-binding, oxidoreductase; HET: MCN FAD; 2.20A {Eubacterium barkeri}
Probab=47.34 E-value=19 Score=30.19 Aligned_cols=52 Identities=21% Similarity=0.178 Sum_probs=34.0
Q ss_pred cceEEcCCCHHHHHHHHHHHHhCCC-cEEEecCCCCCCCCc--ccCCCcEEEEcCCcC
Q psy6765 183 SKLVLKPKTTEEVSAILRYCNEQKI-AVCPQGGNTGVVAGG--VPLYDEVIVSASLMN 237 (246)
Q Consensus 183 p~~vv~P~s~~~v~~~v~~a~~~~~-~~~~~ggG~~~~~~~--~~~~~gv~idl~~m~ 237 (246)
+...++|+|.+|..++++ +++- ...+.+|||++.... -......+||++++.
T Consensus 3 ~f~y~~P~sl~ea~~ll~---~~~~~~a~~laGGT~l~~~~k~~~~~~~~lIdl~~i~ 57 (296)
T 3hrd_C 3 DFEFFAPKTLEEAKGLLH---QYKDVPPAIIAGGTDLVIEINDRWEKPDVVIDIKKLK 57 (296)
T ss_dssp CCEEECCSSHHHHHHHHH---HTTTSCCEEESSCTTHHHHHHTTSCCCSEEEECTTCG
T ss_pred ceeEeCCCCHHHHHHHHH---hCCCCCeEEEECCcHHHHHhhcCCCCCCeEEEcccCh
Confidence 345788999888877654 4432 456779999984211 111346999998854
No 84
>2yv1_A Succinyl-COA ligase [ADP-forming] subunit alpha; COA-binding domain, structural genomics, NPPSFA; 1.70A {Methanocaldococcus jannaschii}
Probab=46.88 E-value=46 Score=27.71 Aligned_cols=89 Identities=9% Similarity=-0.056 Sum_probs=49.2
Q ss_pred eeCCCCeEEEcC-CccHHHHHHHHhhcCc--eeecCCCchhHHhhHHhhhhhh-ccccccC--ccceEEcCCCHHHHHHH
Q psy6765 125 FDELSGNVNSMS-NALVTNRSLELSNTGV--VVLGVPLYDEVIVSASLMNKIL-NFDELSG--KSKLVLKPKTTEEVSAI 198 (246)
Q Consensus 125 id~~~~~v~v~a-G~~~~~l~~~L~~~gl--~~~~~p~s~~~~~~~~~~~~~~-~~~~~~~--~p~~vv~P~s~~~v~~~ 198 (246)
+++....+.+++ |-.-..+.+.+.+.|+ .++..|........ -...| +-.+... .+++++--...+.+.++
T Consensus 10 ~~~~~~v~V~Gasg~~G~~~~~~l~~~g~~~V~~VnP~~~g~~i~---G~~vy~sl~el~~~~~~Dv~ii~vp~~~~~~~ 86 (294)
T 2yv1_A 10 LDENTKAIVQGITGRQGSFHTKKMLECGTKIVGGVTPGKGGQNVH---GVPVFDTVKEAVKETDANASVIFVPAPFAKDA 86 (294)
T ss_dssp SCTTCCEEEETTTSHHHHHHHHHHHHTTCCEEEEECTTCTTCEET---TEEEESSHHHHHHHHCCCEEEECCCHHHHHHH
T ss_pred hCCCCEEEEECCCCCHHHHHHHHHHhCCCeEEEEeCCCCCCceEC---CEeeeCCHHHHhhcCCCCEEEEccCHHHHHHH
Confidence 455555555576 5444445566655554 45666764210000 00111 1111222 57888888888888888
Q ss_pred HHHHHhCCCc-EEEecCCC
Q psy6765 199 LRYCNEQKIA-VCPQGGNT 216 (246)
Q Consensus 199 v~~a~~~~~~-~~~~ggG~ 216 (246)
++.|.+++++ ++....|-
T Consensus 87 v~ea~~~Gi~~vVi~t~G~ 105 (294)
T 2yv1_A 87 VFEAIDAGIELIVVITEHI 105 (294)
T ss_dssp HHHHHHTTCSEEEECCSCC
T ss_pred HHHHHHCCCCEEEEECCCC
Confidence 8888888888 55544443
No 85
>2yl5_A Beta-N-acetylhexosaminidase; hydrolase; 2.15A {Streptococcus pneumoniae} PDB: 2yla_A* 2yl9_A*
Probab=46.72 E-value=13 Score=33.24 Aligned_cols=29 Identities=21% Similarity=0.371 Sum_probs=24.8
Q ss_pred CCHHHHHHHHHHHHhCCCcEEE--ecCCCCC
Q psy6765 73 KTTEEVSAILRYCNEQKIAVCP--QGGNTGV 101 (246)
Q Consensus 73 ~s~~ev~~~v~~a~~~~i~v~~--~GgG~~~ 101 (246)
-|.+|+.+++++|++++|.|+| --=||..
T Consensus 92 YT~~di~eIv~YA~~rgI~VIPEID~PGH~~ 122 (442)
T 2yl5_A 92 LTQAEVTELIEYAKSKDIGLIPAINSPGHMD 122 (442)
T ss_dssp BCHHHHHHHHHHHHTTTCEEEEEEEESSSCH
T ss_pred cCHHHHHHHHHHHHHcCCeeeeecccchhHH
Confidence 3999999999999999999998 3556654
No 86
>4ex8_A ALNA; alpha/beta/alpha-domain, C-glycosynthase, divalent metal ION ligase; 2.10A {Streptomyces SP} PDB: 4ex9_A*
Probab=46.31 E-value=17 Score=30.83 Aligned_cols=109 Identities=13% Similarity=0.046 Sum_probs=59.7
Q ss_pred HHHHHHHHHhCCCcEEEecCCCCCCCCcccCCCeEEEecCCCCCceeeeCCCCeEEEcCCccH----HHHHHHHhhcCce
Q psy6765 78 VSAILRYCNEQKIAVCPQGGNTGVVAGGVPLYDEVIVSASLMNKILNFDELSGNVNSMSNALV----TNRSLELSNTGVV 153 (246)
Q Consensus 78 v~~~v~~a~~~~i~v~~~GgG~~~~g~~~~~~~gvvidl~~m~~i~~id~~~~~v~v~aG~~~----~~l~~~L~~~gl~ 153 (246)
|+..+.+|+..||+|++-||==+..-+... .-.|--||..|.+. ..+.|.+|+.. ..-.++|..+|+.
T Consensus 116 VaaTm~lA~~AGI~VFaTGGiGGVHRgae~-t~DISaDL~eLarT-------pV~VVcaG~KsILDi~~TLE~LET~GV~ 187 (316)
T 4ex8_A 116 VAGTIVIAERAGIQVFTTAGIGGVHRRGED-TLDISPDLLQFRKT-------KMTVVSGGAKSILDHRLTAEYLETAGVP 187 (316)
T ss_dssp HHHHHHHHHHHTCCEEECSCBCCBBTTHHH-HCCBCTHHHHTTTC-------CEEEEESBBCTTBCHHHHHHHHHHTTCC
T ss_pred HHHHHHHHHHCCCcEEEeCCccccCCCCCC-CcchhhhHHHhcCC-------CeEEEecccchhhcchHHHHHHHhCCce
Confidence 788899999999999997753233222110 00233344445443 35667777763 3345677788886
Q ss_pred eecCCCchhHHhhHHhhhhhhccccccCccceEEcCCCHHHHHHHHHHHHhCC
Q psy6765 154 VLGVPLYDEVIVSASLMNKILNFDELSGKSKLVLKPKTTEEVSAILRYCNEQK 206 (246)
Q Consensus 154 ~~~~p~s~~~~~~~~~~~~~~~~~~~~~~p~~vv~P~s~~~v~~~v~~a~~~~ 206 (246)
+-..-.. .. -.+|+... +.... +-.++++++++++.-++.+
T Consensus 188 Vvgy~td-~f-------PaFy~r~S-g~~~p---r~d~~~e~A~~~~a~~~lg 228 (316)
T 4ex8_A 188 VYGYRTD-KL-------AAFVVREA-DVPVT---RMDDLHTAARAAEAHWQVN 228 (316)
T ss_dssp EEEETCS-BC-------CBTTBSCC-SCBCE---EESSHHHHHHHHHHHHHHH
T ss_pred EEEecCC-CC-------ceeeeCCC-CCcCC---CCCCHHHHHHHHHHHHHhC
Confidence 6443221 11 12444222 22222 4467777777777655544
No 87
>2yl6_A Beta-N-acetylhexosaminidase; peptidoglycan-anchor, hydrolase; HET: ETE; 1.60A {Streptococcus pneumoniae} PDB: 2yll_A* 2yl8_A* 3rpm_A*
Probab=45.18 E-value=12 Score=33.29 Aligned_cols=29 Identities=14% Similarity=0.336 Sum_probs=24.9
Q ss_pred CCHHHHHHHHHHHHhCCCcEEE--ecCCCCC
Q psy6765 73 KTTEEVSAILRYCNEQKIAVCP--QGGNTGV 101 (246)
Q Consensus 73 ~s~~ev~~~v~~a~~~~i~v~~--~GgG~~~ 101 (246)
-|.+|+.+++++|+++||.|+| --=||..
T Consensus 89 YT~~di~eIv~YA~~rgI~VIPEID~PGH~~ 119 (434)
T 2yl6_A 89 LTESQMTDLINYAKDKGIGLIPTVNSPGHMD 119 (434)
T ss_dssp EEHHHHHHHHHHHHHTTCEEEEEEEESSSCH
T ss_pred cCHHHHHHHHHHHHHcCCEEEEeccccchHH
Confidence 4899999999999999999999 4556654
No 88
>2yl5_A Beta-N-acetylhexosaminidase; hydrolase; 2.15A {Streptococcus pneumoniae} PDB: 2yla_A* 2yl9_A*
Probab=43.79 E-value=16 Score=32.69 Aligned_cols=28 Identities=21% Similarity=0.399 Sum_probs=23.9
Q ss_pred CHHHHHHHHHHHHhCCCcEEEe--cCCCCC
Q psy6765 191 TTEEVSAILRYCNEQKIAVCPQ--GGNTGV 218 (246)
Q Consensus 191 s~~~v~~~v~~a~~~~~~~~~~--ggG~~~ 218 (246)
|.+|+.+++++|++++|.|+|- .=||..
T Consensus 93 T~~di~eIv~YA~~rgI~VIPEID~PGH~~ 122 (442)
T 2yl5_A 93 TQAEVTELIEYAKSKDIGLIPAINSPGHMD 122 (442)
T ss_dssp CHHHHHHHHHHHHTTTCEEEEEEEESSSCH
T ss_pred CHHHHHHHHHHHHHcCCeeeeecccchhHH
Confidence 8999999999999999999985 236654
No 89
>1t3q_C Quinoline 2-oxidoreductase medium subunit; QOR, molybdenum, MCD; HET: FAD MCN; 1.80A {Pseudomonas putida} SCOP: d.87.2.1 d.145.1.3
Probab=43.40 E-value=18 Score=30.28 Aligned_cols=53 Identities=15% Similarity=0.102 Sum_probs=35.4
Q ss_pred cceEEcCCCHHHHHHHHHHHHhCCCcEEEecCCCCCCCCc--ccCCCcEEEEcCC---cCcc
Q psy6765 183 SKLVLKPKTTEEVSAILRYCNEQKIAVCPQGGNTGVVAGG--VPLYDEVIVSASL---MNKI 239 (246)
Q Consensus 183 p~~vv~P~s~~~v~~~v~~a~~~~~~~~~~ggG~~~~~~~--~~~~~gv~idl~~---m~~i 239 (246)
+...++|+|.+|..++++- +-...+.+|||++.... -......+||+++ |+.|
T Consensus 5 ~f~y~~P~sl~ea~~ll~~----~~~a~~laGGT~l~~~~k~~~~~~~~lIdl~~i~eL~~I 62 (288)
T 1t3q_C 5 AFSYRAPASLQEVIQVLAD----DPDARIIAGGQSLLPLLAFRLVYPSCLVDLRNVSELFEI 62 (288)
T ss_dssp CCEEECCSSHHHHHHHHHH----CTTCEEESSCTTHHHHHHTTCCCCSEEEECTTCGGGGCE
T ss_pred CceEECCCCHHHHHHHHhh----CCCCEEEeCchhHHHHHhcCCCCCCEEEECCCChhhcCe
Confidence 4457899999999888763 22356678999973211 1123469999997 5555
No 90
>2ozl_B PDHE1-B, pyruvate dehydrogenase E1 component subunit beta; pyruvate_dehydrogenase_complex, human, multienzyme_complex_component; HET: TPP; 1.90A {Homo sapiens} SCOP: c.36.1.7 c.48.1.2 PDB: 1ni4_B* 3exe_B* 3exf_B* 3exg_B 3exh_B* 3exi_B
Probab=43.03 E-value=24 Score=30.18 Aligned_cols=34 Identities=12% Similarity=0.137 Sum_probs=29.4
Q ss_pred CCc-cEEEeCCCHHHHHHHHHHHHhCCCcEEEecC
Q psy6765 64 GKS-KLVLKPKTTEEVSAILRYCNEQKIAVCPQGG 97 (246)
Q Consensus 64 ~~p-~~vv~P~s~~ev~~~v~~a~~~~i~v~~~Gg 97 (246)
..| ..|+.|.|.+|...+++.|.+.+-|+.+|-.
T Consensus 150 ~iP~l~V~~Psd~~e~~~~l~~a~~~~~Pv~i~~~ 184 (341)
T 2ozl_B 150 HCPGLKVVSPWNSEDAKGLIKSAIRDNNPVVVLEN 184 (341)
T ss_dssp TSTTCEEECCCSHHHHHHHHHHHHHSSSCEEEEEC
T ss_pred cCCCCEEEEeCCHHHHHHHHHHHHhcCCCEEEEEC
Confidence 344 5689999999999999999999999999754
No 91
>3nvz_B Xanthine dehydrogenase/oxidase; hydroxylase, homodimer, xanthine oxidase, indole-3-aldehyde, oxidoreductase; HET: FAD MTE I3A; 1.60A {Bos taurus} PDB: 3eub_B* 3etr_B* 3ns1_B* 3nrz_B* 3rca_B* 3sr6_B* 3nvw_B* 3nvv_B* 3nvy_B*
Probab=42.71 E-value=12 Score=31.54 Aligned_cols=54 Identities=13% Similarity=0.065 Sum_probs=36.5
Q ss_pred cCccceEEcCCCHHHHHHHHHHHHhCCCcEEEecCCCCCCCCc--ccCCCcEEEEcCCcC
Q psy6765 180 SGKSKLVLKPKTTEEVSAILRYCNEQKIAVCPQGGNTGVVAGG--VPLYDEVIVSASLMN 237 (246)
Q Consensus 180 ~~~p~~vv~P~s~~~v~~~v~~a~~~~~~~~~~ggG~~~~~~~--~~~~~gv~idl~~m~ 237 (246)
.+.+...++|.|.+|..++++- +. ...+.+|||++.... -....+.+||++++.
T Consensus 7 ~g~~~~y~~P~sl~ea~~ll~~---~~-~a~~laGGT~l~~~~k~~~~~~~~lIdl~~i~ 62 (305)
T 3nvz_B 7 EGERVTWIQASTLKELLDLKAQ---HP-EAKLVVGNTEIGIEMKFKNQLFPMIICPAWIP 62 (305)
T ss_dssp ECSSCEEEECCSHHHHHHHHHH---CT-TCEECSSCTTHHHHHHHSCCCCSEEEECTTCG
T ss_pred cCCCeEEEccCCHHHHHHHHHh---CC-CCEEEECccHHHHHHhcCCCCCCEEEECCCCh
Confidence 4566778999999998887643 32 357789999984210 012346899999743
No 92
>2yl6_A Beta-N-acetylhexosaminidase; peptidoglycan-anchor, hydrolase; HET: ETE; 1.60A {Streptococcus pneumoniae} PDB: 2yll_A* 2yl8_A* 3rpm_A*
Probab=41.90 E-value=15 Score=32.76 Aligned_cols=28 Identities=14% Similarity=0.364 Sum_probs=23.8
Q ss_pred CHHHHHHHHHHHHhCCCcEEEe--cCCCCC
Q psy6765 191 TTEEVSAILRYCNEQKIAVCPQ--GGNTGV 218 (246)
Q Consensus 191 s~~~v~~~v~~a~~~~~~~~~~--ggG~~~ 218 (246)
|.+|+.+++++|++++|.|+|- .=||..
T Consensus 90 T~~di~eIv~YA~~rgI~VIPEID~PGH~~ 119 (434)
T 2yl6_A 90 TESQMTDLINYAKDKGIGLIPTVNSPGHMD 119 (434)
T ss_dssp EHHHHHHHHHHHHHTTCEEEEEEEESSSCH
T ss_pred CHHHHHHHHHHHHHcCCEEEEeccccchHH
Confidence 8899999999999999999995 236654
No 93
>2gjx_A Beta-hexosaminidase alpha chain; beta-hexosaminidase A, glycosidase, TAY-sachs disease, GM2 ganglisode, TIM barrel, hydrolase; HET: NAG BMA NDG; 2.80A {Homo sapiens} SCOP: c.1.8.6 d.92.2.1 PDB: 2gk1_A*
Probab=40.73 E-value=18 Score=32.84 Aligned_cols=29 Identities=17% Similarity=0.310 Sum_probs=25.2
Q ss_pred CCHHHHHHHHHHHHhCCCcEEEe--cCCCCC
Q psy6765 73 KTTEEVSAILRYCNEQKIAVCPQ--GGNTGV 101 (246)
Q Consensus 73 ~s~~ev~~~v~~a~~~~i~v~~~--GgG~~~ 101 (246)
-|.+|+.+++++|++++|.|+|- .=||..
T Consensus 212 YT~~di~eiv~yA~~rgI~VIPEID~PGH~~ 242 (507)
T 2gjx_A 212 YTAQDVKEVIEYARLRGIRVLAEFDTPGHTL 242 (507)
T ss_dssp BCHHHHHHHHHHHHHTTCEEEEECCCSSSCT
T ss_pred cCHHHHHHHHHHHHHcCCEEEECCCCcchHH
Confidence 58999999999999999999993 556655
No 94
>3rcn_A Beta-N-acetylhexosaminidase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, alpha-beta half sandwich; HET: MSE; 2.51A {Arthrobacter aurescens}
Probab=40.16 E-value=19 Score=33.10 Aligned_cols=29 Identities=17% Similarity=0.371 Sum_probs=24.7
Q ss_pred CCHHHHHHHHHHHHhCCCcEEE--ecCCCCC
Q psy6765 73 KTTEEVSAILRYCNEQKIAVCP--QGGNTGV 101 (246)
Q Consensus 73 ~s~~ev~~~v~~a~~~~i~v~~--~GgG~~~ 101 (246)
-|.+|+.+++++|++++|.|+| --=||..
T Consensus 221 YT~~di~eIv~YA~~rgI~VIPEID~PGH~~ 251 (543)
T 3rcn_A 221 YTQDDLREIVAFAADRHITVIPEIDVPGHSQ 251 (543)
T ss_dssp BCHHHHHHHHHHHHHTTCEEEEECCCSSSCH
T ss_pred cCHHHHHHHHHHHHHcCCEEeeeeccchhHH
Confidence 4999999999999999999999 3456654
No 95
>4gim_A Pseudouridine-5'-phosphate glycosidase; alpha-beta-alpha sandwich fold, hydrolase; HET: PSU; 1.80A {Escherichia coli} PDB: 4gij_A 4gik_A* 4gil_A*
Probab=40.13 E-value=34 Score=29.21 Aligned_cols=111 Identities=13% Similarity=0.099 Sum_probs=59.6
Q ss_pred HHHHHHHHHhCCCcEEEecCCCCCCCCcccCCCeEEEecCCCCCceeeeCCCCeEEEcCCccH----HHHHHHHhhcCce
Q psy6765 78 VSAILRYCNEQKIAVCPQGGNTGVVAGGVPLYDEVIVSASLMNKILNFDELSGNVNSMSNALV----TNRSLELSNTGVV 153 (246)
Q Consensus 78 v~~~v~~a~~~~i~v~~~GgG~~~~g~~~~~~~gvvidl~~m~~i~~id~~~~~v~v~aG~~~----~~l~~~L~~~gl~ 153 (246)
|+..+.+|+..||+|++-||==+..-|... .-.|--||..|.+ ...+.|.+|+.. ..-.++|...|+.
T Consensus 136 VaaTm~lA~~AGI~VFaTGGIGGVHRgae~-t~DISADL~eLar-------TpV~VVcAG~KSILDi~~TLE~LET~GVp 207 (335)
T 4gim_A 136 VASTMIIAALAGIKVFATGGIGGVHRGAEH-TFDISADLQELAN-------TNVTVVCAGAASILDLGLTTEYLETFGVP 207 (335)
T ss_dssp HHHHHHHHHHTTCCEEECSCCCCBBTTHHH-HCCBCHHHHHHHH-------SCCEEEECBCCTTBCHHHHHHHHHHTTCC
T ss_pred HHHHHHHHHHCCCcEEeeCCcCccCCCCCC-CccccchHHHhcc-------CCeEEEeecchhhccchhHHHHHHhcCce
Confidence 678889999999999998753333222111 0023334433333 234556677653 3344667778876
Q ss_pred eecCCCchhHHhhHHhhhhhhccccccCccceEEcCCCHHHHHHHHHHHHhCCC
Q psy6765 154 VLGVPLYDEVIVSASLMNKILNFDELSGKSKLVLKPKTTEEVSAILRYCNEQKI 207 (246)
Q Consensus 154 ~~~~p~s~~~~~~~~~~~~~~~~~~~~~~p~~vv~P~s~~~v~~~v~~a~~~~~ 207 (246)
+-..-..+ . -.+|+.. .+.... .+-.+++|++++++.-++.++
T Consensus 208 Vvgy~td~-f-------PaFy~r~-Sg~~~~--~rvd~~~e~A~i~~~~~~lgl 250 (335)
T 4gim_A 208 LIGYQTKA-L-------PAFFCRT-SPFDVS--IRLDSASEIARAMVVKWQSGL 250 (335)
T ss_dssp EEEETCSB-C-------CBTTBSC-CSSBCS--EEECCHHHHHHHHHHHHHTTC
T ss_pred EEEecCCC-C-------ceeeccC-CCCcCc--ceeCCHHHHHHHHHHHHHcCC
Confidence 64432211 1 1244322 111111 233678888888887766655
No 96
>1w85_B Pyruvate dehydrogenase E1 component, beta subunit; dehydrogenase, multienzyme complex, oxidoreductase; HET: TDP; 2.0A {Geobacillus stearothermophilus} SCOP: c.36.1.7 c.48.1.2 PDB: 1w88_B* 3dva_B* 3dv0_B* 3duf_B*
Probab=39.71 E-value=29 Score=29.33 Aligned_cols=86 Identities=16% Similarity=0.019 Sum_probs=50.6
Q ss_pred CCCCc-cEEEeCCCHHHHHHHHHHHHhCCCcEEEe---cCCCCCCCCcccCCCeEEEecCCCCCceeeeCCCCeEEEcCC
Q psy6765 62 QEGKS-KLVLKPKTTEEVSAILRYCNEQKIAVCPQ---GGNTGVVAGGVPLYDEVIVSASLMNKILNFDELSGNVNSMSN 137 (246)
Q Consensus 62 ~~~~p-~~vv~P~s~~ev~~~v~~a~~~~i~v~~~---GgG~~~~g~~~~~~~gvvidl~~m~~i~~id~~~~~v~v~aG 137 (246)
....| ..|+.|.|.+|...+++.|-+++.|+.++ +-.....+ .++.+. .- -.+.+...+.++...+.+.-|
T Consensus 136 ~~~iP~l~V~~Psd~~e~~~~l~~a~~~~~Pv~i~~p~~l~r~~~~-~~~~~~-~~---~~~Gk~~~~~~g~dv~iva~G 210 (324)
T 1w85_B 136 VAQQPGLKVVIPSTPYDAKGLLISAIRDNDPVIFLEHLKLYRSFRQ-EVPEGE-YT---IPIGKADIKREGKDITIIAYG 210 (324)
T ss_dssp HTTSTTCEEECCSSHHHHHHHHHHHHHSSSCEEEEEETTTSSSCCE-ECCSSC-CC---CCTTCCEEEECCSSEEEEECT
T ss_pred HccCCCCEEEeeCCHHHHHHHHHHHHHcCCCEEEEechHhcCCCCC-CCCCcc-cc---ccCCceEEEecCCCEEEEEec
Confidence 34566 57999999999999999999999999985 22221100 111110 00 123332223344556677888
Q ss_pred ccHHHHHH---HHhhcCc
Q psy6765 138 ALVTNRSL---ELSNTGV 152 (246)
Q Consensus 138 ~~~~~l~~---~L~~~gl 152 (246)
.......+ .|.+.|+
T Consensus 211 ~~~~~a~~Aa~~L~~~Gi 228 (324)
T 1w85_B 211 AMVHESLKAAAELEKEGI 228 (324)
T ss_dssp THHHHHHHHHHHHHHTTC
T ss_pred HHHHHHHHHHHHHHhcCC
Confidence 87765544 4445554
No 97
>1now_A Beta-hexosaminidase beta chain; (beta/alpha)8-barrel, homodimer, family 20 glycosidase, HYDR; HET: NAG IFG; 2.20A {Homo sapiens} SCOP: c.1.8.6 d.92.2.1 PDB: 1nou_A* 1np0_A* 2gjx_B* 3lmy_A* 1o7a_A* 2gk1_B*
Probab=39.37 E-value=20 Score=32.62 Aligned_cols=29 Identities=21% Similarity=0.358 Sum_probs=25.0
Q ss_pred CCHHHHHHHHHHHHhCCCcEEE--ecCCCCC
Q psy6765 73 KTTEEVSAILRYCNEQKIAVCP--QGGNTGV 101 (246)
Q Consensus 73 ~s~~ev~~~v~~a~~~~i~v~~--~GgG~~~ 101 (246)
-|.+|+.+++++|++++|.|+| -.=||..
T Consensus 217 YT~~di~eiv~yA~~rgI~VIPEID~PGH~~ 247 (507)
T 1now_A 217 YTPNDVRMVIEYARLRGIRVLPEFDTPGHTL 247 (507)
T ss_dssp BCHHHHHHHHHHHHHTTCEEEEEEEESSSCT
T ss_pred CCHHHHHHHHHHHHHcCCEEEEccCCchhHH
Confidence 4899999999999999999998 3566655
No 98
>1qs0_B 2-oxoisovalerate dehydrogenase beta-subunit; heterotetramer, THDP cofactor, oxidoreductase; HET: TDP; 2.40A {Pseudomonas putida} SCOP: c.36.1.7 c.48.1.2 PDB: 2bp7_B
Probab=39.35 E-value=30 Score=29.41 Aligned_cols=32 Identities=13% Similarity=-0.012 Sum_probs=28.1
Q ss_pred CCCc-cEEEeCCCHHHHHHHHHHHHhCCCcEEE
Q psy6765 63 EGKS-KLVLKPKTTEEVSAILRYCNEQKIAVCP 94 (246)
Q Consensus 63 ~~~p-~~vv~P~s~~ev~~~v~~a~~~~i~v~~ 94 (246)
+..| ..|+.|.|.+|...+++.|-+++.|+.+
T Consensus 139 ~~iP~l~V~~Psd~~e~~~~l~~A~~~~~Pv~i 171 (338)
T 1qs0_B 139 TQVCGLRTVMPSNPYDAKGLLIASIECDDPVIF 171 (338)
T ss_dssp TTSTTCEEECCCSHHHHHHHHHHHHHSSSCEEE
T ss_pred hcCCCCEEEeeCCHHHHHHHHHHHHhcCCcEEE
Confidence 3445 5689999999999999999999999999
No 99
>3q2o_A Phosphoribosylaminoimidazole carboxylase, ATPase; carboxylates, ATP binding, lyase; 1.96A {Bacillus anthracis} PDB: 3qff_A* 3r5h_A*
Probab=39.26 E-value=89 Score=26.65 Aligned_cols=130 Identities=9% Similarity=-0.049 Sum_probs=62.6
Q ss_pred HHHHHHHHHHhCCCcEEEecCCCCCCCCcccCCCeEEEecCCCCCceeeeCCCCeEEEcCCccHHHHHHHHhhcCceeec
Q psy6765 77 EVSAILRYCNEQKIAVCPQGGNTGVVAGGVPLYDEVIVSASLMNKILNFDELSGNVNSMSNALVTNRSLELSNTGVVVLG 156 (246)
Q Consensus 77 ev~~~v~~a~~~~i~v~~~GgG~~~~g~~~~~~~gvvidl~~m~~i~~id~~~~~v~v~aG~~~~~l~~~L~~~gl~~~~ 156 (246)
=-..+++.|++.|+.+++....-........ +..++.+......+.++-.....++.+......++.+.+.+.++ +++
T Consensus 25 ~g~~la~aa~~~G~~vi~~d~~~~~~~~~~a-d~~~~~~~~d~~~l~~~~~~~dvI~~~~e~~~~~~~~~l~~~g~-~~~ 102 (389)
T 3q2o_A 25 LGRMMALAAKEMGYKIAVLDPTKNSPCAQVA-DIEIVASYDDLKAIQHLAEISDVVTYEFENIDYRCLQWLEKHAY-LPQ 102 (389)
T ss_dssp HHHHHHHHHHHTTCEEEEEESSTTCTTTTTC-SEEEECCTTCHHHHHHHHHTCSEEEESCCCCCHHHHHHHHHHSC-CTT
T ss_pred HHHHHHHHHHHcCCEEEEEeCCCCCchHHhC-CceEecCcCCHHHHHHHHHhCCEeeeccccccHHHHHHHHhhCc-cCC
Confidence 3566778888999998886432211111121 12333333322223222223445777777777778888888776 443
Q ss_pred CCCchhHHhhHHhhhhhhccccccCccceEEcCCCHHHHHHHHHHHHhCCCcEEEec
Q psy6765 157 VPLYDEVIVSASLMNKILNFDELSGKSKLVLKPKTTEEVSAILRYCNEQKIAVCPQG 213 (246)
Q Consensus 157 ~p~s~~~~~~~~~~~~~~~~~~~~~~p~~vv~P~s~~~v~~~v~~a~~~~~~~~~~g 213 (246)
++..-....|=............ ..|... ...+.+++. +++.+.+.|++.+-
T Consensus 103 ~~~~~~~~~dK~~~k~~l~~~Gi-p~p~~~-~~~~~~~~~---~~~~~~g~P~vvKp 154 (389)
T 3q2o_A 103 GSQLLSKTQNRFTEKNAIEKAGL-PVATYR-LVQNQEQLT---EAIAELSYPSVLKT 154 (389)
T ss_dssp CSHHHHHTTSHHHHHHHHHHTTC-CCCCEE-EESSHHHHH---HHHHHHCSSEEEEE
T ss_pred CHHHHHHhcCHHHHHHHHHHCCC-CCCCeE-EECCHHHHH---HHHHhcCCCEEEEe
Confidence 33332221111111111111112 233332 234556554 45567777777654
No 100
>2egz_A 3-dehydroquinate dehydratase; aquifex aeolicus VF5, structural genomics, NPPSFA, national project on protein structural and functional analyses; HET: TLA; 1.75A {Aquifex aeolicus} PDB: 2ysw_A
Probab=39.20 E-value=24 Score=28.21 Aligned_cols=36 Identities=17% Similarity=0.172 Sum_probs=31.6
Q ss_pred CccceEEcCCCHHHHHHHHHHHHhCCCcEEEecCCC
Q psy6765 181 GKSKLVLKPKTTEEVSAILRYCNEQKIAVCPQGGNT 216 (246)
Q Consensus 181 ~~p~~vv~P~s~~~v~~~v~~a~~~~~~~~~~ggG~ 216 (246)
..++.++.|.+.+|+..++++.++...|++..+-|.
T Consensus 139 aivKia~~a~~~~D~l~ll~~~~~~~~P~I~~~MG~ 174 (219)
T 2egz_A 139 GIPKIAVKANSYEDVARLLCISRQVEGEKILISMGD 174 (219)
T ss_dssp SEEEEEEECSSHHHHHHHHHHHTTSCSCBEEEEESS
T ss_pred CEEEEEEccCCHHHHHHHHHHHHhCCCCEEEEECCC
Confidence 388999999999999999999988888888887554
No 101
>3gh5_A HEX1, beta-hexosaminidase; beta-N-acetylhexosaminidase, glycosphingolipids, paenibacill GH20, hydrolase, structural genomics, NPPSFA; HET: NAG; 1.60A {Paenibacillus SP} PDB: 3gh4_A* 3gh7_A* 3sur_A* 3sus_A* 3sut_A* 3suu_A* 3suv_A* 3suw_A*
Probab=38.78 E-value=20 Score=32.82 Aligned_cols=29 Identities=28% Similarity=0.331 Sum_probs=24.9
Q ss_pred CCHHHHHHHHHHHHhCCCcEEE--ecCCCCC
Q psy6765 73 KTTEEVSAILRYCNEQKIAVCP--QGGNTGV 101 (246)
Q Consensus 73 ~s~~ev~~~v~~a~~~~i~v~~--~GgG~~~ 101 (246)
-|.+|+.+++++|++++|.|+| --=||..
T Consensus 253 YT~~di~eIv~YA~~rgI~VIPEID~PGH~~ 283 (525)
T 3gh5_A 253 YTQEQFKDIVSYAAERYIEVIPEIDMPGHTN 283 (525)
T ss_dssp BCHHHHHHHHHHHHTTTCEEEEECCCSSSCH
T ss_pred cCHHHHHHHHHHHHHcCCEEEEEecccchHH
Confidence 4999999999999999999999 3556664
No 102
>2gjx_A Beta-hexosaminidase alpha chain; beta-hexosaminidase A, glycosidase, TAY-sachs disease, GM2 ganglisode, TIM barrel, hydrolase; HET: NAG BMA NDG; 2.80A {Homo sapiens} SCOP: c.1.8.6 d.92.2.1 PDB: 2gk1_A*
Probab=37.80 E-value=22 Score=32.36 Aligned_cols=31 Identities=16% Similarity=0.240 Sum_probs=25.9
Q ss_pred CCHHHHHHHHHHHHhCCCcEEEe--cCCCCCCC
Q psy6765 190 KTTEEVSAILRYCNEQKIAVCPQ--GGNTGVVA 220 (246)
Q Consensus 190 ~s~~~v~~~v~~a~~~~~~~~~~--ggG~~~~~ 220 (246)
=|.+|+.+++++|++++|.|+|- .=||....
T Consensus 212 YT~~di~eiv~yA~~rgI~VIPEID~PGH~~a~ 244 (507)
T 2gjx_A 212 YTAQDVKEVIEYARLRGIRVLAEFDTPGHTLSW 244 (507)
T ss_dssp BCHHHHHHHHHHHHHTTCEEEEECCCSSSCTTT
T ss_pred cCHHHHHHHHHHHHHcCCEEEECCCCcchHHHH
Confidence 38899999999999999999996 34776643
No 103
>1jak_A Beta-N-acetylhexosaminidase; glycoside hydrolase, family 20, substrate-assisted catalysis, alpha/beta barrel, isofagomin inhibitor complex; HET: IFG; 1.75A {Streptomyces plicatus} SCOP: c.1.8.6 d.92.2.1 PDB: 1hp4_A* 1hp5_A* 1m01_A* 1m04_A* 1m03_A*
Probab=37.77 E-value=22 Score=32.40 Aligned_cols=30 Identities=23% Similarity=0.313 Sum_probs=24.7
Q ss_pred CCCHHHHHHHHHHHHhCCCcEEEe--cCCCCC
Q psy6765 72 PKTTEEVSAILRYCNEQKIAVCPQ--GGNTGV 101 (246)
Q Consensus 72 P~s~~ev~~~v~~a~~~~i~v~~~--GgG~~~ 101 (246)
.-|.+|+.+++++|++++|.|+|- .=||..
T Consensus 227 ~YT~~di~eiv~yA~~rgI~VIPEID~PGH~~ 258 (512)
T 1jak_A 227 YYTKAEYKEIVRYAASRHLEVVPEIDMPGHTN 258 (512)
T ss_dssp CBCHHHHHHHHHHHHHTTCEEEEECCCSSSCH
T ss_pred CCCHHHHHHHHHHHHHcCCEEEEccCCCchHH
Confidence 348999999999999999999983 455543
No 104
>1umd_B E1-beta, 2-OXO acid dehydrogenase beta subunit; alpha(2)beta(2) tetramer, structural genomics; HET: TDP; 1.90A {Thermus thermophilus} SCOP: c.36.1.7 c.48.1.2 PDB: 1um9_B* 1umc_B* 1umb_B*
Probab=37.56 E-value=35 Score=28.76 Aligned_cols=84 Identities=17% Similarity=0.052 Sum_probs=48.6
Q ss_pred CCc-cEEEeCCCHHHHHHHHHHHHhCCCcEEEe---cCCCCCCCCcccCCCeEEEecCCCCCceeeeCCCCeEEEcCCcc
Q psy6765 64 GKS-KLVLKPKTTEEVSAILRYCNEQKIAVCPQ---GGNTGVVAGGVPLYDEVIVSASLMNKILNFDELSGNVNSMSNAL 139 (246)
Q Consensus 64 ~~p-~~vv~P~s~~ev~~~v~~a~~~~i~v~~~---GgG~~~~g~~~~~~~gvvidl~~m~~i~~id~~~~~v~v~aG~~ 139 (246)
..| ..|+.|.|.+|...+++.|-+++.|+.++ +-.....+ .++.+. .-+ .+.+...+.++...+.+.-|..
T Consensus 139 ~iP~~~V~~P~d~~e~~~~l~~a~~~~~Pv~i~~p~~l~~~~~~-~~~~~~-~~~---~~Gk~~~~~~g~dv~iva~G~~ 213 (324)
T 1umd_B 139 HTAGLKVVAVSTPYDAKGLLKAAIRDEDPVVFLEPKRLYRSVKE-EVPEED-YTL---PIGKAALRREGKDLTLICYGTV 213 (324)
T ss_dssp TSTTCEEEECCSHHHHHHHHHHHHHCSSCEEEEEEGGGSSSCCE-ECCSSC-CCC---CTTCCEEEECCSSEEEEECGGG
T ss_pred cCCCCEEEEeCCHHHHHHHHHHHHhcCCCEEEEechHhcCCCCC-CcCCCC-ccc---cCCcceEEecCCCEEEEEecHH
Confidence 345 57999999999999999999999999985 22221100 111111 001 1122212233445667788887
Q ss_pred HHHHHH---HHhhcCc
Q psy6765 140 VTNRSL---ELSNTGV 152 (246)
Q Consensus 140 ~~~l~~---~L~~~gl 152 (246)
.....+ .|.+.|+
T Consensus 214 ~~~a~~Aa~~L~~~Gi 229 (324)
T 1umd_B 214 MPEVLQAAAELAKAGV 229 (324)
T ss_dssp HHHHHHHHHHHHHTTC
T ss_pred HHHHHHHHHHHHhcCC
Confidence 765554 4455554
No 105
>3rcn_A Beta-N-acetylhexosaminidase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, alpha-beta half sandwich; HET: MSE; 2.51A {Arthrobacter aurescens}
Probab=37.34 E-value=22 Score=32.63 Aligned_cols=28 Identities=18% Similarity=0.405 Sum_probs=24.1
Q ss_pred CHHHHHHHHHHHHhCCCcEEEec--CCCCC
Q psy6765 191 TTEEVSAILRYCNEQKIAVCPQG--GNTGV 218 (246)
Q Consensus 191 s~~~v~~~v~~a~~~~~~~~~~g--gG~~~ 218 (246)
|.+|+.+++++|++++|.|+|-= =||..
T Consensus 222 T~~di~eIv~YA~~rgI~VIPEID~PGH~~ 251 (543)
T 3rcn_A 222 TQDDLREIVAFAADRHITVIPEIDVPGHSQ 251 (543)
T ss_dssp CHHHHHHHHHHHHHTTCEEEEECCCSSSCH
T ss_pred CHHHHHHHHHHHHHcCCEEeeeeccchhHH
Confidence 89999999999999999999953 26654
No 106
>1now_A Beta-hexosaminidase beta chain; (beta/alpha)8-barrel, homodimer, family 20 glycosidase, HYDR; HET: NAG IFG; 2.20A {Homo sapiens} SCOP: c.1.8.6 d.92.2.1 PDB: 1nou_A* 1np0_A* 2gjx_B* 3lmy_A* 1o7a_A* 2gk1_B*
Probab=36.62 E-value=23 Score=32.17 Aligned_cols=29 Identities=21% Similarity=0.379 Sum_probs=24.9
Q ss_pred CHHHHHHHHHHHHhCCCcEEEe--cCCCCCC
Q psy6765 191 TTEEVSAILRYCNEQKIAVCPQ--GGNTGVV 219 (246)
Q Consensus 191 s~~~v~~~v~~a~~~~~~~~~~--ggG~~~~ 219 (246)
|.+|+.+++++|++++|.|+|- .=||...
T Consensus 218 T~~di~eiv~yA~~rgI~VIPEID~PGH~~a 248 (507)
T 1now_A 218 TPNDVRMVIEYARLRGIRVLPEFDTPGHTLS 248 (507)
T ss_dssp CHHHHHHHHHHHHHTTCEEEEEEEESSSCTT
T ss_pred CHHHHHHHHHHHHHcCCEEEEccCCchhHHH
Confidence 8899999999999999999985 3477653
No 107
>3gh5_A HEX1, beta-hexosaminidase; beta-N-acetylhexosaminidase, glycosphingolipids, paenibacill GH20, hydrolase, structural genomics, NPPSFA; HET: NAG; 1.60A {Paenibacillus SP} PDB: 3gh4_A* 3gh7_A* 3sur_A* 3sus_A* 3sut_A* 3suu_A* 3suv_A* 3suw_A*
Probab=36.09 E-value=24 Score=32.29 Aligned_cols=28 Identities=29% Similarity=0.366 Sum_probs=24.1
Q ss_pred CHHHHHHHHHHHHhCCCcEEEec--CCCCC
Q psy6765 191 TTEEVSAILRYCNEQKIAVCPQG--GNTGV 218 (246)
Q Consensus 191 s~~~v~~~v~~a~~~~~~~~~~g--gG~~~ 218 (246)
|.+|+.+++++|++++|.|+|-= =||..
T Consensus 254 T~~di~eIv~YA~~rgI~VIPEID~PGH~~ 283 (525)
T 3gh5_A 254 TQEQFKDIVSYAAERYIEVIPEIDMPGHTN 283 (525)
T ss_dssp CHHHHHHHHHHHHTTTCEEEEECCCSSSCH
T ss_pred CHHHHHHHHHHHHHcCCEEEEEecccchHH
Confidence 89999999999999999999953 26654
No 108
>2bfd_B 2-oxoisovalerate dehydrogenase beta subunit; oxidoreductase, multi-enzyme complex, acylation, oxidative decarboxylation, maple syrup urine disease; HET: TDP; 1.39A {Homo sapiens} SCOP: c.36.1.7 c.48.1.2 PDB: 1dtw_B* 1olu_B* 1ols_B* 1v11_B* 1v16_B* 1v1m_B* 1u5b_B* 1wci_B* 1v1r_B* 1x7x_B* 1x7w_B* 1x7z_B* 1x80_B* 2beu_B* 2bev_B* 2bew_B* 2bfb_B* 2bfc_B* 1x7y_B* 2bfe_B* ...
Probab=35.17 E-value=37 Score=28.94 Aligned_cols=33 Identities=18% Similarity=0.149 Sum_probs=28.9
Q ss_pred CCCc-cEEEeCCCHHHHHHHHHHHHhCCCcEEEe
Q psy6765 63 EGKS-KLVLKPKTTEEVSAILRYCNEQKIAVCPQ 95 (246)
Q Consensus 63 ~~~p-~~vv~P~s~~ev~~~v~~a~~~~i~v~~~ 95 (246)
...| ..|+.|.|.+|...+++.|-+++.|+.++
T Consensus 155 ~~iP~l~V~~Psd~~e~~~~l~~a~~~~~Pv~i~ 188 (342)
T 2bfd_B 155 AHCPGIKVVIPRSPFQAKGLLLSCIEDKNPCIFF 188 (342)
T ss_dssp HTSTTCEEECCSSHHHHHHHHHHHHHSSSCEEEE
T ss_pred hcCCCcEEEeeCCHHHHHHHHHHHHhcCCcEEEE
Confidence 3456 57999999999999999999999999994
No 109
>1xty_A PTH, peptidyl-tRNA hydrolase; mixed beta sheet; 1.80A {Pyrococcus abyssi}
Probab=35.15 E-value=56 Score=23.41 Aligned_cols=38 Identities=11% Similarity=0.258 Sum_probs=33.1
Q ss_pred ccCccceEEcCCCHHHHHHHHHHHHhCCCcE-EEecCCC
Q psy6765 179 LSGKSKLVLKPKTTEEVSAILRYCNEQKIAV-CPQGGNT 216 (246)
Q Consensus 179 ~~~~p~~vv~P~s~~~v~~~v~~a~~~~~~~-~~~ggG~ 216 (246)
..+.+..|+...++++..++.+-|.+.+++. .++-.|+
T Consensus 51 ~~g~~KiVlk~~~e~el~~l~~~a~~~gl~~~~i~DAG~ 89 (120)
T 1xty_A 51 HQGQPKIIVKVNSLDEIISRAKKAETMNLPFSIIEDAGK 89 (120)
T ss_dssp HTTCCEEEEEESSHHHHHHHHHHHHHTTCCEEEEECCSS
T ss_pred HCCCcEEEEecCCHHHHHHHHHHHHHCCCCEEEEEcCCc
Confidence 4578999999999999999999999999996 5667765
No 110
>2kng_A Protein LSR2; DNA-binding domain, immune response, DNA binding protein; NMR {Mycobacterium tuberculosis}
Probab=35.03 E-value=10 Score=23.50 Aligned_cols=23 Identities=22% Similarity=0.348 Sum_probs=19.1
Q ss_pred CHHHHHHHHHHHHhCCCcEEEec
Q psy6765 74 TTEEVSAILRYCNEQKIAVCPQG 96 (246)
Q Consensus 74 s~~ev~~~v~~a~~~~i~v~~~G 96 (246)
..++-++|=.||+++|++|..||
T Consensus 11 ~~~~~~aIR~WAr~nG~~VsdRG 33 (55)
T 2kng_A 11 DREQSAAIREWARRNGHNVSTRG 33 (55)
T ss_dssp SSTHHHHHHHHHHHTTCCCCSSS
T ss_pred CccChHHHHHHHHHcCCcCCCCC
Confidence 33367889999999999998887
No 111
>3ozo_A N-acetylglucosaminidase; beta-N-acetyl-D-hexosaminidase, hydrolase-hydrolase inhibito; HET: NGT; 2.00A {Ostrinia furnacalis} PDB: 3nsn_A* 3nsm_A* 3ozp_A* 3s6t_A* 3vtr_A*
Probab=34.96 E-value=26 Score=32.46 Aligned_cols=30 Identities=17% Similarity=0.223 Sum_probs=25.5
Q ss_pred CCCHHHHHHHHHHHHhCCCcEEE--ecCCCCC
Q psy6765 72 PKTTEEVSAILRYCNEQKIAVCP--QGGNTGV 101 (246)
Q Consensus 72 P~s~~ev~~~v~~a~~~~i~v~~--~GgG~~~ 101 (246)
.-|.+|+.+++++|++++|.|+| --=||..
T Consensus 252 ~YT~~di~eiv~yA~~rgI~VIPEId~PGH~~ 283 (572)
T 3ozo_A 252 VYTKAAIREVVRFGLERGVRVLPEFDAPAHVG 283 (572)
T ss_dssp CBCHHHHHHHHHHHHHTTCEEEEEEEESSSCC
T ss_pred CcCHHHHHHHHHHHHHhCCceeeeeccchHHH
Confidence 45999999999999999999999 4566764
No 112
>1jak_A Beta-N-acetylhexosaminidase; glycoside hydrolase, family 20, substrate-assisted catalysis, alpha/beta barrel, isofagomin inhibitor complex; HET: IFG; 1.75A {Streptomyces plicatus} SCOP: c.1.8.6 d.92.2.1 PDB: 1hp4_A* 1hp5_A* 1m01_A* 1m04_A* 1m03_A*
Probab=34.84 E-value=26 Score=31.91 Aligned_cols=28 Identities=25% Similarity=0.396 Sum_probs=23.5
Q ss_pred CHHHHHHHHHHHHhCCCcEEEe--cCCCCC
Q psy6765 191 TTEEVSAILRYCNEQKIAVCPQ--GGNTGV 218 (246)
Q Consensus 191 s~~~v~~~v~~a~~~~~~~~~~--ggG~~~ 218 (246)
|.+|+.+++++|++++|.|+|- .=||..
T Consensus 229 T~~di~eiv~yA~~rgI~VIPEID~PGH~~ 258 (512)
T 1jak_A 229 TKAEYKEIVRYAASRHLEVVPEIDMPGHTN 258 (512)
T ss_dssp CHHHHHHHHHHHHHTTCEEEEECCCSSSCH
T ss_pred CHHHHHHHHHHHHHcCCEEEEccCCCchHH
Confidence 8899999999999999999994 235543
No 113
>1wn2_A Peptidyl-tRNA hydrolase; riken structural genomics/proteomics initiative, structural genomics; 1.20A {Pyrococcus horikoshii} PDB: 2d3k_A
Probab=34.67 E-value=57 Score=23.43 Aligned_cols=38 Identities=16% Similarity=0.191 Sum_probs=32.9
Q ss_pred ccCccceEEcCCCHHHHHHHHHHHHhCCCcE-EEecCCC
Q psy6765 179 LSGKSKLVLKPKTTEEVSAILRYCNEQKIAV-CPQGGNT 216 (246)
Q Consensus 179 ~~~~p~~vv~P~s~~~v~~~v~~a~~~~~~~-~~~ggG~ 216 (246)
..+.|..|++..++++..++.+-|.+.+++. .++-.|+
T Consensus 52 ~~g~~Kvvlk~~~e~el~~l~~~a~~~gl~~~~i~DAG~ 90 (121)
T 1wn2_A 52 REGQKKVVVKVESEEELFKLKAEAEKLGLPNALIRDAGL 90 (121)
T ss_dssp HTTCCEEEEEESSHHHHHHHHHHHHHTTCCEEEEECTTC
T ss_pred HCCCcEEEEecCCHHHHHHHHHHHHHCCCCEEEEEcCCc
Confidence 4578999999999999999999999999997 5666766
No 114
>1ik6_A Pyruvate dehydrogenase; E1BETA, tetramer, GXXXG, oxidoreductase; 2.00A {Pyrobaculum aerophilum} SCOP: c.36.1.7 c.48.1.2
Probab=34.48 E-value=39 Score=29.23 Aligned_cols=82 Identities=15% Similarity=-0.038 Sum_probs=48.2
Q ss_pred CCCc-cEEEeCCCHHHHHHHHHHHHhCCCcEEEe---cCCCCCCCCcccCCCeEEEecCCCCCceeeeCCCCeEEEcCCc
Q psy6765 63 EGKS-KLVLKPKTTEEVSAILRYCNEQKIAVCPQ---GGNTGVVAGGVPLYDEVIVSASLMNKILNFDELSGNVNSMSNA 138 (246)
Q Consensus 63 ~~~p-~~vv~P~s~~ev~~~v~~a~~~~i~v~~~---GgG~~~~g~~~~~~~gvvidl~~m~~i~~id~~~~~v~v~aG~ 138 (246)
...| ..|+.|.|.+|...++++|-+.+-|+.++ +-.... ...++... . . -.+.+...+.++...+.+..|.
T Consensus 185 ~~iPnl~V~~Psd~~e~~~ll~~A~~~~~Pv~i~~p~~l~r~~-~~~v~~~~-~--~-~~~G~~~v~~~g~dv~Iia~G~ 259 (369)
T 1ik6_A 185 VHTPGLVVVMPSTPYNAKGLLKAAIRGDDPVVFLEPKILYRAP-REEVPEGD-Y--V-VEIGKARVAREGDDVTLVTYGA 259 (369)
T ss_dssp HTCTTCEEECCCSHHHHHHHHHHHHHSSSCEEEEEEGGGSSCC-CEEEECSS-C--C-CCTTCCEEEECCSSEEEEECTT
T ss_pred cCCCCcEEEecCCHHHHHHHHHHHHhCCCCEEEEEehhhhccC-CCCcCCCc-c--c-ccCCceEEEEcCCCEEEEEeCH
Confidence 3445 56899999999999999999998999985 221110 00111110 0 0 0123321223345567788888
Q ss_pred cHHHHHHHHhh
Q psy6765 139 LVTNRSLELSN 149 (246)
Q Consensus 139 ~~~~l~~~L~~ 149 (246)
......++...
T Consensus 260 ~v~~a~~Aa~~ 270 (369)
T 1ik6_A 260 VVHKALEAAER 270 (369)
T ss_dssp HHHHHHHHHHT
T ss_pred HHHHHHHHHHH
Confidence 87766665543
No 115
>1iuk_A Hypothetical protein TT1466; structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; 1.70A {Thermus thermophilus} SCOP: c.2.1.8 PDB: 1iul_A
Probab=34.30 E-value=59 Score=23.67 Aligned_cols=78 Identities=9% Similarity=-0.045 Sum_probs=41.9
Q ss_pred CeEEEcC----CccHHHHHHHHhhcCc-eeecCCC--chhHHhhHHhhhhhh-ccccccCccceEEcCCCHHHHHHHHHH
Q psy6765 130 GNVNSMS----NALVTNRSLELSNTGV-VVLGVPL--YDEVIVSASLMNKIL-NFDELSGKSKLVLKPKTTEEVSAILRY 201 (246)
Q Consensus 130 ~~v~v~a----G~~~~~l~~~L~~~gl-~~~~~p~--s~~~~~~~~~~~~~~-~~~~~~~~p~~vv~P~s~~~v~~~v~~ 201 (246)
..+.+++ |.....+.+.|.+.|+ .|+..|. .... .+ ...| +-.+....++.++.....+.+.++++.
T Consensus 15 ~vaVvGas~~~g~~G~~~~~~l~~~G~~v~~vnp~~~~~~i--~G---~~~~~sl~el~~~vDlavi~vp~~~~~~v~~~ 89 (140)
T 1iuk_A 15 TIAVLGAHKDPSRPAHYVPRYLREQGYRVLPVNPRFQGEEL--FG---EEAVASLLDLKEPVDILDVFRPPSALMDHLPE 89 (140)
T ss_dssp EEEEETCCSSTTSHHHHHHHHHHHTTCEEEEECGGGTTSEE--TT---EECBSSGGGCCSCCSEEEECSCHHHHTTTHHH
T ss_pred EEEEECCCCCCCChHHHHHHHHHHCCCEEEEeCCCcccCcC--CC---EEecCCHHHCCCCCCEEEEEeCHHHHHHHHHH
Confidence 3455666 3444456566666554 4455554 2211 00 0111 222333467777777777888888887
Q ss_pred HHhCCCcEEEe
Q psy6765 202 CNEQKIAVCPQ 212 (246)
Q Consensus 202 a~~~~~~~~~~ 212 (246)
|.+.+++.+..
T Consensus 90 ~~~~gi~~i~~ 100 (140)
T 1iuk_A 90 VLALRPGLVWL 100 (140)
T ss_dssp HHHHCCSCEEE
T ss_pred HHHcCCCEEEE
Confidence 77776644333
No 116
>2g2c_A Putative molybdenum cofactor biosynthesis protein; structural genomics, PSI, protein structure initiative; 1.50A {Corynebacterium diphtheriae} SCOP: c.57.1.1
Probab=33.99 E-value=61 Score=24.38 Aligned_cols=36 Identities=19% Similarity=0.225 Sum_probs=31.3
Q ss_pred ceEEcCCCHHHHHHHHHHHHhCCCcEEEecCCCCCC
Q psy6765 184 KLVLKPKTTEEVSAILRYCNEQKIAVCPQGGNTGVV 219 (246)
Q Consensus 184 ~~vv~P~s~~~v~~~v~~a~~~~~~~~~~ggG~~~~ 219 (246)
...+.|.+.+++.+.++.+.+.+.-++.-.||+|.+
T Consensus 47 ~~~iv~Dd~~~I~~~l~~a~~~~~DlVittGG~g~~ 82 (167)
T 2g2c_A 47 SEVVVPEGYDTVVEAIATALKQGARFIITAGGTGIR 82 (167)
T ss_dssp EEEEECSSHHHHHHHHHHHHHTTCSEEEEESCCSSS
T ss_pred EEEEeCCCHHHHHHHHHHHHhCCCCEEEECCCCCCC
Confidence 457889999999999998877668899999999985
No 117
>4evq_A Putative ABC transporter subunit, substrate-bindi component; structural genomics, PSI-biology, midwest center for structu genomics; HET: MSE PHB; 1.40A {Rhodopseudomonas palustris} PDB: 4evr_A
Probab=33.83 E-value=44 Score=27.81 Aligned_cols=147 Identities=10% Similarity=0.006 Sum_probs=75.8
Q ss_pred CCccEEEeCCCHHHHHHHHHHHHhCCCcEEEecCCCCCCCCcccCCCeEEEecCC------CCCceeeeCC-CCeEEEcC
Q psy6765 64 GKSKLVLKPKTTEEVSAILRYCNEQKIAVCPQGGNTGVVAGGVPLYDEVIVSASL------MNKILNFDEL-SGNVNSMS 136 (246)
Q Consensus 64 ~~p~~vv~P~s~~ev~~~v~~a~~~~i~v~~~GgG~~~~g~~~~~~~gvvidl~~------m~~i~~id~~-~~~v~v~a 136 (246)
....+|+-|.+......+...+.++++|++.-+.++...........-.-+..+. +-+. -++.. ...+.+..
T Consensus 81 ~~v~~iig~~~s~~~~~~~~~~~~~~iP~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-l~~~g~~~ia~i~~ 159 (375)
T 4evq_A 81 EKADVLIGTVHSGVAMAMVKIAREDGIPTIVPNAGADIITRAMCAPNVFRTSFANGQIGRATGDA-MIKAGLKKAVTVTW 159 (375)
T ss_dssp SCCSEEEECSSHHHHHHHHHHHHHHCCCEEESSCCCGGGGTTTCCTTEEESSCCHHHHHHHHHHH-HHHTTCCEEEEEEE
T ss_pred CCceEEEcCCccHHHHHHHHHHHHcCceEEecCCCChhhcccCCCCCEEEeeCChHhHHHHHHHH-HHHcCCcEEEEEec
Confidence 4788999999888888899999999999988765543211100001101010000 0000 00111 11122222
Q ss_pred Cc-----cHHHHHHHHhhcCceeecCCCchhHHhhHHhhhhhhccccccCccceEEcCCCHHHHHHHHHHHHhCCCcEEE
Q psy6765 137 NA-----LVTNRSLELSNTGVVVLGVPLYDEVIVSASLMNKILNFDELSGKSKLVLKPKTTEEVSAILRYCNEQKIAVCP 211 (246)
Q Consensus 137 G~-----~~~~l~~~L~~~gl~~~~~p~s~~~~~~~~~~~~~~~~~~~~~~p~~vv~P~s~~~v~~~v~~a~~~~~~~~~ 211 (246)
.. ....+.+.+.++|+.+...-.+.....+ ...... ......|++|+.+.+..+...+++.+++.++.+-.
T Consensus 160 ~~~~~~~~~~~~~~~l~~~G~~v~~~~~~~~~~~d---~~~~~~-~l~~~~~dai~~~~~~~~a~~~~~~~~~~g~~vp~ 235 (375)
T 4evq_A 160 KYAAGEEMVSGFKKSFTAGKGEVVKDITIAFPDVE---FQSALA-EIASLKPDCVYAFFSGGGALKFIKDYAAANLGIPL 235 (375)
T ss_dssp SSHHHHHHHHHHHHHHHHTTCEEEEEEEECTTCCC---CHHHHH-HHHHHCCSEEEEECCTHHHHHHHHHHHHTTCCCCE
T ss_pred CchHHHHHHHHHHHHHHHcCCeEEEEEecCCCCcc---HHHHHH-HHHhcCCCEEEEecCcchHHHHHHHHHHcCCCceE
Confidence 22 2344566777777754321111000000 000000 00123689999978888999999999999877555
Q ss_pred ecCC
Q psy6765 212 QGGN 215 (246)
Q Consensus 212 ~ggG 215 (246)
.|.+
T Consensus 236 ~~~~ 239 (375)
T 4evq_A 236 WGPG 239 (375)
T ss_dssp EEEG
T ss_pred EecC
Confidence 5554
No 118
>3ced_A Methionine import ATP-binding protein METN 2; ABC transporter, NIL domain, structur genomics, PSI-2, protein structure initiative; 2.15A {Staphylococcus aureus subsp} SCOP: d.58.18.13
Probab=33.66 E-value=57 Score=22.29 Aligned_cols=26 Identities=8% Similarity=0.063 Sum_probs=22.6
Q ss_pred eCC-CHHHHHHHHHHHHhCCCcEEEec
Q psy6765 71 KPK-TTEEVSAILRYCNEQKIAVCPQG 96 (246)
Q Consensus 71 ~P~-s~~ev~~~v~~a~~~~i~v~~~G 96 (246)
.+. +.+++.+++++.+++++.+-+.|
T Consensus 70 l~G~~~~~~~~ai~~L~~~~v~vEvlg 96 (98)
T 3ced_A 70 IPYISSVDFGKFEKELIERQVKMEVLR 96 (98)
T ss_dssp ESCCCHHHHHHHHHHHHHTTCEEEEEE
T ss_pred EeCCCHHHHHHHHHHHHHCCCEEEEec
Confidence 466 78999999999999999888874
No 119
>2egz_A 3-dehydroquinate dehydratase; aquifex aeolicus VF5, structural genomics, NPPSFA, national project on protein structural and functional analyses; HET: TLA; 1.75A {Aquifex aeolicus} PDB: 2ysw_A
Probab=33.46 E-value=31 Score=27.53 Aligned_cols=34 Identities=18% Similarity=0.205 Sum_probs=28.1
Q ss_pred CCCccEEEeCCCHHHHHHHHHHHHhCCCcEEEec
Q psy6765 63 EGKSKLVLKPKTTEEVSAILRYCNEQKIAVCPQG 96 (246)
Q Consensus 63 ~~~p~~vv~P~s~~ev~~~v~~a~~~~i~v~~~G 96 (246)
+..++.++.|.+.+|+..++++.++...|++..+
T Consensus 138 gaivKia~~a~~~~D~l~ll~~~~~~~~P~I~~~ 171 (219)
T 2egz_A 138 GGIPKIAVKANSYEDVARLLCISRQVEGEKILIS 171 (219)
T ss_dssp TSEEEEEEECSSHHHHHHHHHHHTTSCSCBEEEE
T ss_pred CCEEEEEEccCCHHHHHHHHHHHHhCCCCEEEEE
Confidence 4478889999999999999999988777766654
No 120
>2g2c_A Putative molybdenum cofactor biosynthesis protein; structural genomics, PSI, protein structure initiative; 1.50A {Corynebacterium diphtheriae} SCOP: c.57.1.1
Probab=33.41 E-value=72 Score=23.98 Aligned_cols=35 Identities=20% Similarity=0.250 Sum_probs=30.1
Q ss_pred cEEEeCCCHHHHHHHHHHHHhCCCcEEEecCCCCC
Q psy6765 67 KLVLKPKTTEEVSAILRYCNEQKIAVCPQGGNTGV 101 (246)
Q Consensus 67 ~~vv~P~s~~ev~~~v~~a~~~~i~v~~~GgG~~~ 101 (246)
...+.|.+.+++.+.++.+.+.+.-+++-.||+|.
T Consensus 47 ~~~iv~Dd~~~I~~~l~~a~~~~~DlVittGG~g~ 81 (167)
T 2g2c_A 47 SEVVVPEGYDTVVEAIATALKQGARFIITAGGTGI 81 (167)
T ss_dssp EEEEECSSHHHHHHHHHHHHHTTCSEEEEESCCSS
T ss_pred EEEEeCCCHHHHHHHHHHHHhCCCCEEEECCCCCC
Confidence 45678999999999999988755778999999998
No 121
>2epl_X N-acetyl-beta-D-glucosaminidase; glycoside hydrolase, family 20, GCNA, hydro; 1.40A {Streptococcus gordonii} PDB: 2epk_X 2epm_X 2epn_A* 2epo_A
Probab=32.58 E-value=29 Score=32.46 Aligned_cols=30 Identities=17% Similarity=0.135 Sum_probs=25.1
Q ss_pred CCCHHHHHHHHHHHHhCCCcEEEe--cCCCCC
Q psy6765 72 PKTTEEVSAILRYCNEQKIAVCPQ--GGNTGV 101 (246)
Q Consensus 72 P~s~~ev~~~v~~a~~~~i~v~~~--GgG~~~ 101 (246)
+-|.+|+.+++++|+++||.|+|- .=||..
T Consensus 141 ~YT~~di~eiv~yA~~rgI~VIPEID~PGH~~ 172 (627)
T 2epl_X 141 RYTVAELQEIEDYAADFDMSFVPCIQTLAHLS 172 (627)
T ss_dssp CBCHHHHHHHHHHHHHTTCEEEEECCSSSCCH
T ss_pred CcCHHHHHHHHHHHHHcCCEEEEeeccCCcHH
Confidence 459999999999999999999993 455544
No 122
>1rzw_A Protein AF2095(GR4); beta-sheet of 4 parallel, anti-parallel beta-strands and 3 alpha-helices, structural genomics, PSI; NMR {Archaeoglobus fulgidus} SCOP: c.131.1.1 PDB: 3erj_A
Probab=32.58 E-value=77 Score=22.89 Aligned_cols=38 Identities=26% Similarity=0.293 Sum_probs=33.1
Q ss_pred cCccceEEcCCCHHHHHHHHHHHHhCCCcE-EEecCCCC
Q psy6765 180 SGKSKLVLKPKTTEEVSAILRYCNEQKIAV-CPQGGNTG 217 (246)
Q Consensus 180 ~~~p~~vv~P~s~~~v~~~v~~a~~~~~~~-~~~ggG~~ 217 (246)
.+.+..|++..++++..++.+.|.+.+++. +++..|..
T Consensus 46 ~G~~Kvvlk~~~e~el~~L~~~a~~~gl~~~~I~DAG~T 84 (123)
T 1rzw_A 46 EGQKKVVLKVKSLEELLGIKHKAESLGLVTGLVQDAGLT 84 (123)
T ss_dssp GCSSEEEEECSCHHHHHHHHHHHHHTTCCEEEECCTTCC
T ss_pred CCCcEEEEecCCHHHHHHHHHHHHHCCCCEEEEECCCCc
Confidence 468899999999999999999999999986 66777764
No 123
>3ozo_A N-acetylglucosaminidase; beta-N-acetyl-D-hexosaminidase, hydrolase-hydrolase inhibito; HET: NGT; 2.00A {Ostrinia furnacalis} PDB: 3nsn_A* 3nsm_A* 3ozp_A* 3s6t_A* 3vtr_A*
Probab=32.19 E-value=30 Score=31.98 Aligned_cols=29 Identities=17% Similarity=0.260 Sum_probs=24.6
Q ss_pred CCHHHHHHHHHHHHhCCCcEEEe--cCCCCC
Q psy6765 190 KTTEEVSAILRYCNEQKIAVCPQ--GGNTGV 218 (246)
Q Consensus 190 ~s~~~v~~~v~~a~~~~~~~~~~--ggG~~~ 218 (246)
=|.+|+.+++++|++++|.|+|- .=||..
T Consensus 253 YT~~di~eiv~yA~~rgI~VIPEId~PGH~~ 283 (572)
T 3ozo_A 253 YTKAAIREVVRFGLERGVRVLPEFDAPAHVG 283 (572)
T ss_dssp BCHHHHHHHHHHHHHTTCEEEEEEEESSSCC
T ss_pred cCHHHHHHHHHHHHHhCCceeeeeccchHHH
Confidence 38999999999999999999985 246664
No 124
>1oi7_A Succinyl-COA synthetase alpha chain; SCS, ligase, riken structural genomics/proteomics initiative, RSGI, structural genomics; 1.23A {Thermus thermophilus} SCOP: c.2.1.8 c.23.4.1
Probab=31.74 E-value=53 Score=27.28 Aligned_cols=88 Identities=7% Similarity=-0.088 Sum_probs=47.7
Q ss_pred eeCCCCeEEEcC-CccHHHHHHHHhhcCc--eeecCCCchhHHhhHHhhhhhh-ccccccC--ccceEEcCCCHHHHHHH
Q psy6765 125 FDELSGNVNSMS-NALVTNRSLELSNTGV--VVLGVPLYDEVIVSASLMNKIL-NFDELSG--KSKLVLKPKTTEEVSAI 198 (246)
Q Consensus 125 id~~~~~v~v~a-G~~~~~l~~~L~~~gl--~~~~~p~s~~~~~~~~~~~~~~-~~~~~~~--~p~~vv~P~s~~~v~~~ 198 (246)
++.....+.+++ |-.-..+.+.+.+.|+ .++..|........ -...| +-.+... .++.++.-...+.+.++
T Consensus 4 ~~~~~~VaVvGasG~~G~~~~~~l~~~g~~~v~~VnP~~~g~~i~---G~~vy~sl~el~~~~~~Dv~Ii~vp~~~~~~~ 80 (288)
T 1oi7_A 4 VNRETRVLVQGITGREGQFHTKQMLTYGTKIVAGVTPGKGGMEVL---GVPVYDTVKEAVAHHEVDASIIFVPAPAAADA 80 (288)
T ss_dssp CCTTCEEEEETTTSHHHHHHHHHHHHHTCEEEEEECTTCTTCEET---TEEEESSHHHHHHHSCCSEEEECCCHHHHHHH
T ss_pred cCCCCEEEEECCCCCHHHHHHHHHHHcCCeEEEEECCCCCCceEC---CEEeeCCHHHHhhcCCCCEEEEecCHHHHHHH
Confidence 444444566666 5444445555555554 45666654100000 00111 1111222 67888877888888888
Q ss_pred HHHHHhCCCc-EEEecCC
Q psy6765 199 LRYCNEQKIA-VCPQGGN 215 (246)
Q Consensus 199 v~~a~~~~~~-~~~~ggG 215 (246)
++.|.+++++ ++....|
T Consensus 81 ~~ea~~~Gi~~vVi~t~G 98 (288)
T 1oi7_A 81 ALEAAHAGIPLIVLITEG 98 (288)
T ss_dssp HHHHHHTTCSEEEECCSC
T ss_pred HHHHHHCCCCEEEEECCC
Confidence 8888888888 5555544
No 125
>1rlk_A Hypothetical protein TA0108; structural genomics, conserved hypothetical protein, PSI, PR structure initiative; HET: SO4; 1.95A {Thermoplasma acidophilum} SCOP: c.131.1.1
Probab=31.48 E-value=56 Score=23.28 Aligned_cols=39 Identities=23% Similarity=0.255 Sum_probs=33.1
Q ss_pred ccCccceEEcCCCHHHHHHHHHHHHhCCCcE-EEecCCCC
Q psy6765 179 LSGKSKLVLKPKTTEEVSAILRYCNEQKIAV-CPQGGNTG 217 (246)
Q Consensus 179 ~~~~p~~vv~P~s~~~v~~~v~~a~~~~~~~-~~~ggG~~ 217 (246)
..+.|..|+...++++...+.+-+.+.+++. .++-.|+.
T Consensus 48 ~~g~~kiVlk~~~e~~l~~l~~~a~~~gl~~~~v~DAG~T 87 (117)
T 1rlk_A 48 DEGQRKIVVKVNDLDEIMEIKRMADSMGIVNEIVQDRGYT 87 (117)
T ss_dssp HTTCCEEEEEESSHHHHHHHHHHHHHHTCCEEEEECCCSS
T ss_pred HCCCeEEEEecCCHHHHHHHHHHHHHCCCCEEEEEeCCcc
Confidence 4578999999999999999999999999986 56666653
No 126
>2epl_X N-acetyl-beta-D-glucosaminidase; glycoside hydrolase, family 20, GCNA, hydro; 1.40A {Streptococcus gordonii} PDB: 2epk_X 2epm_X 2epn_A* 2epo_A
Probab=31.06 E-value=32 Score=32.19 Aligned_cols=29 Identities=17% Similarity=0.111 Sum_probs=24.4
Q ss_pred CCHHHHHHHHHHHHhCCCcEEEec--CCCCC
Q psy6765 190 KTTEEVSAILRYCNEQKIAVCPQG--GNTGV 218 (246)
Q Consensus 190 ~s~~~v~~~v~~a~~~~~~~~~~g--gG~~~ 218 (246)
=|.+|+.+++++|++++|.|+|-= =||..
T Consensus 142 YT~~di~eiv~yA~~rgI~VIPEID~PGH~~ 172 (627)
T 2epl_X 142 YTVAELQEIEDYAADFDMSFVPCIQTLAHLS 172 (627)
T ss_dssp BCHHHHHHHHHHHHHTTCEEEEECCSSSCCH
T ss_pred cCHHHHHHHHHHHHHcCCEEEEeeccCCcHH
Confidence 389999999999999999999953 25554
No 127
>1mkz_A Molybdenum cofactor biosynthesis protein B; MAD, WEAK anomalous signal, molybdopterin synthesis, structural genomics, PSI; HET: MSE; 1.60A {Escherichia coli} SCOP: c.57.1.1 PDB: 1r2k_B
Probab=30.51 E-value=77 Score=23.99 Aligned_cols=36 Identities=14% Similarity=0.154 Sum_probs=30.8
Q ss_pred ceEEcCCCHHHHHHHHHHHHhC-CCcEEEecCCCCCC
Q psy6765 184 KLVLKPKTTEEVSAILRYCNEQ-KIAVCPQGGNTGVV 219 (246)
Q Consensus 184 ~~vv~P~s~~~v~~~v~~a~~~-~~~~~~~ggG~~~~ 219 (246)
...+.|.+.+++.+.++.+.+. +.-+++-.||+|.+
T Consensus 46 ~~~iv~Dd~~~i~~~l~~a~~~~~~DlVittGG~g~~ 82 (172)
T 1mkz_A 46 DKAIVKENRYAIRAQVSAWIASDDVQVVLITGGTGLT 82 (172)
T ss_dssp EEEEECSCHHHHHHHHHHHHHSSSCCEEEEESCCSSS
T ss_pred EEEEeCCCHHHHHHHHHHHHhcCCCCEEEeCCCCCCC
Confidence 4567899999999999987765 68999999999984
No 128
>1mkz_A Molybdenum cofactor biosynthesis protein B; MAD, WEAK anomalous signal, molybdopterin synthesis, structural genomics, PSI; HET: MSE; 1.60A {Escherichia coli} SCOP: c.57.1.1 PDB: 1r2k_B
Probab=30.24 E-value=86 Score=23.70 Aligned_cols=35 Identities=14% Similarity=0.158 Sum_probs=29.8
Q ss_pred cEEEeCCCHHHHHHHHHHHHhC-CCcEEEecCCCCC
Q psy6765 67 KLVLKPKTTEEVSAILRYCNEQ-KIAVCPQGGNTGV 101 (246)
Q Consensus 67 ~~vv~P~s~~ev~~~v~~a~~~-~i~v~~~GgG~~~ 101 (246)
...+.|.+.+++.+.++.+.+. +.-+++-.||+|.
T Consensus 46 ~~~iv~Dd~~~i~~~l~~a~~~~~~DlVittGG~g~ 81 (172)
T 1mkz_A 46 DKAIVKENRYAIRAQVSAWIASDDVQVVLITGGTGL 81 (172)
T ss_dssp EEEEECSCHHHHHHHHHHHHHSSSCCEEEEESCCSS
T ss_pred EEEEeCCCHHHHHHHHHHHHhcCCCCEEEeCCCCCC
Confidence 3467799999999999998875 5779999999998
No 129
>2zv3_A PTH, peptidyl-tRNA hydrolase; cytoplasm, structural genomics, NPPSFA; 2.10A {Methanocaldococcus jannaschii}
Probab=29.27 E-value=56 Score=23.23 Aligned_cols=38 Identities=16% Similarity=0.264 Sum_probs=32.0
Q ss_pred ccCccceEEcCCCHHHHHHHHHHHHhCCCcE-EEecCCC
Q psy6765 179 LSGKSKLVLKPKTTEEVSAILRYCNEQKIAV-CPQGGNT 216 (246)
Q Consensus 179 ~~~~p~~vv~P~s~~~v~~~v~~a~~~~~~~-~~~ggG~ 216 (246)
..+.|..|++..++++..++.+-+.+.+++. .++-.|+
T Consensus 46 ~~g~~kivlk~~~e~~l~~l~~~a~~~gl~~~~i~DAG~ 84 (115)
T 2zv3_A 46 REGQKKVVVKVNSEKELIDIYNKARSEGLPCSIIRDAGH 84 (115)
T ss_dssp HTTCCEEEEEESSHHHHHHHHHHHHHHTCCEEEEEECC-
T ss_pred HCCCeEEEEecCCHHHHHHHHHHHHHcCCCEEEEEeCCc
Confidence 4578999999999999999999999999986 5566664
No 130
>3imk_A Putative molybdenum carrier protein; YP_461806.1, structural genomics, joint center for structural genomics, JCSG; HET: MSE MES PG4 PG6; 1.45A {Syntrophus aciditrophicus SB}
Probab=28.93 E-value=91 Score=23.62 Aligned_cols=34 Identities=18% Similarity=0.131 Sum_probs=29.9
Q ss_pred CCCCccEEEeCCC---HHHHHHHHHHHHhCCCcEEEe
Q psy6765 62 QEGKSKLVLKPKT---TEEVSAILRYCNEQKIAVCPQ 95 (246)
Q Consensus 62 ~~~~p~~vv~P~s---~~ev~~~v~~a~~~~i~v~~~ 95 (246)
..++|-.++.+.. .+++..+.+|..+|++.+.-.
T Consensus 98 ~~~KP~l~i~l~~~~~~~~~~~v~~wl~~~~i~vLNV 134 (158)
T 3imk_A 98 QYKKPCLHIDLDRISIEDAATLINSWTVSHHIQVLNI 134 (158)
T ss_dssp HTTCCEEEEETTTSCHHHHHHHHHHHHHHTTCCEEEE
T ss_pred HhCCCEEEEecccccccchHHHHHHHHHHCCceEEEe
Confidence 3679999999998 999999999999999987654
No 131
>2pbq_A Molybdenum cofactor biosynthesis MOG; molybdopterin, MPT, structural genomics, NPPSFA, national PR protein structural and functional analyses; 1.70A {Aquifex aeolicus} PDB: 2qq1_A 3mci_A 3mcj_A 3k6a_A* 2f7w_A 2f7y_A 2fuw_A
Probab=28.25 E-value=99 Score=23.51 Aligned_cols=38 Identities=13% Similarity=0.188 Sum_probs=31.6
Q ss_pred ccceEEcCCCHHHHHHHHHHHHhC-CCcEEEecCCCCCC
Q psy6765 182 KSKLVLKPKTTEEVSAILRYCNEQ-KIAVCPQGGNTGVV 219 (246)
Q Consensus 182 ~p~~vv~P~s~~~v~~~v~~a~~~-~~~~~~~ggG~~~~ 219 (246)
.+...+.|.+.+++.+.++.+.+. +.-+++-.||+|.+
T Consensus 43 ~v~~~iv~Dd~~~I~~~l~~~~~~~~~DlVittGG~g~g 81 (178)
T 2pbq_A 43 EVEYRVIPDERDLIEKTLIELADEKGCSLILTTGGTGPA 81 (178)
T ss_dssp EEEEEEECSCHHHHHHHHHHHHHTSCCSEEEEESCCSSS
T ss_pred EEEEEEcCCCHHHHHHHHHHHHhcCCCCEEEECCCCCCC
Confidence 335678899999999999987663 78899999999985
No 132
>2is8_A Molybdopterin biosynthesis enzyme, MOAB; globular alpha/beta fold, structu genomics, NPPSFA; 1.64A {Thermus thermophilus} PDB: 3mch_A
Probab=27.82 E-value=94 Score=23.24 Aligned_cols=36 Identities=19% Similarity=0.384 Sum_probs=30.6
Q ss_pred ceEEcCCCHHHHHHHHHHHHhC-CCcEEEecCCCCCC
Q psy6765 184 KLVLKPKTTEEVSAILRYCNEQ-KIAVCPQGGNTGVV 219 (246)
Q Consensus 184 ~~vv~P~s~~~v~~~v~~a~~~-~~~~~~~ggG~~~~ 219 (246)
...+.|.+.+++.+.++.+.+. +.-+++-.||+|.+
T Consensus 39 ~~~iv~Dd~~~i~~~l~~~~~~~~~DlVittGG~g~g 75 (164)
T 2is8_A 39 AYELVPDEPPMIKKVLRLWADREGLDLILTNGGTGLA 75 (164)
T ss_dssp EEEEECSCHHHHHHHHHHHHHTSCCSEEEEESCCSSS
T ss_pred EEEEcCCCHHHHHHHHHHHHhcCCCCEEEEcCCCCCC
Confidence 4577899999999999987664 78899999999985
No 133
>1c7s_A Beta-N-acetylhexosaminidase; glycosyl hydrolase, chitinolysis, A/B(TIM)-barrel, site directed mutagenesis; HET: CBS; 1.80A {Serratia marcescens} SCOP: b.1.18.2 b.2.2.3 c.1.8.6 d.92.2.1 PDB: 1c7t_A* 1qba_A 1qbb_A*
Probab=27.66 E-value=37 Score=32.99 Aligned_cols=30 Identities=17% Similarity=0.274 Sum_probs=25.0
Q ss_pred CCCHHHHHHHHHHHHhCCCcEEE--ecCCCCC
Q psy6765 72 PKTTEEVSAILRYCNEQKIAVCP--QGGNTGV 101 (246)
Q Consensus 72 P~s~~ev~~~v~~a~~~~i~v~~--~GgG~~~ 101 (246)
.-|.+|+.+++++|++++|.|+| --=||..
T Consensus 396 ~YT~~direIv~YA~~rgI~VIPEID~PGH~~ 427 (858)
T 1c7s_A 396 FFSRQDYIDIIKYAQARQIEVIPEIDMPAHAR 427 (858)
T ss_dssp CBCHHHHHHHHHHHHTTTCEEEEEEEESSSCH
T ss_pred CCCHHHHHHHHHHHHHcCCEEEEcccccchHH
Confidence 46999999999999999999998 3455644
No 134
>3o1n_A 3-dehydroquinate dehydratase; structural genomics, center for structural genomics of infec diseases, csgid, TIM barrel, lyase; 1.03A {Salmonella enterica subsp} PDB: 3s42_A 3l2i_A* 3lb0_A 4guf_A 4gug_A* 4guh_A* 3nnt_A* 4guj_A* 3m7w_A 3oex_A 4gfs_A* 4gui_A* 1gqn_A 1l9w_A* 1qfe_A*
Probab=27.34 E-value=60 Score=26.87 Aligned_cols=35 Identities=17% Similarity=0.226 Sum_probs=29.7
Q ss_pred ccceEEcCCCHHHHHHHHHHHHh-----CCCcEEEecCCC
Q psy6765 182 KSKLVLKPKTTEEVSAILRYCNE-----QKIAVCPQGGNT 216 (246)
Q Consensus 182 ~p~~vv~P~s~~~v~~~v~~a~~-----~~~~~~~~ggG~ 216 (246)
.++.++.|.+.+|+..++++..+ .+.|++.++-|.
T Consensus 192 IvKia~~a~s~~Dvl~Ll~~~~~~~~~~~~~PlIa~~MG~ 231 (276)
T 3o1n_A 192 IPKIAVMPQTKADVLTLLTATVEMQERYADRPIITMSMSK 231 (276)
T ss_dssp EEEEEECCSSHHHHHHHHHHHHHHHHHTCCSCCEEEECSG
T ss_pred EEEEEecCCChHHHHHHHHHHHHHHhcCCCCCEEEEECCC
Confidence 67899999999999999998754 578999887654
No 135
>2ox1_A 3-dehydroquinate dehydratase; (beta-alpha)8 barrel, lyase; 2.33A {Archaeoglobus fulgidus}
Probab=27.06 E-value=65 Score=25.14 Aligned_cols=32 Identities=19% Similarity=0.167 Sum_probs=26.1
Q ss_pred CCccEEEeCCCHHHHHHHHHHHHhCCCcEEEec
Q psy6765 64 GKSKLVLKPKTTEEVSAILRYCNEQKIAVCPQG 96 (246)
Q Consensus 64 ~~p~~vv~P~s~~ev~~~v~~a~~~~i~v~~~G 96 (246)
-.++.++.|.+.+|+..++++.++.. |++..+
T Consensus 119 DivKia~~a~~~~D~l~ll~~~~~~~-p~I~~~ 150 (196)
T 2ox1_A 119 DLVKIATMGKSKRDVETIVRILTNYD-DVVAFL 150 (196)
T ss_dssp SEEEEEEECCSHHHHHHHHHHHHHCS-SEEEEE
T ss_pred CEEEEEEcCCCHHHHHHHHHHHhhCC-CeEEEE
Confidence 45678999999999999999998865 666544
No 136
>2lnd_A De novo designed protein, PFK fold; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Artificial gene}
Probab=26.75 E-value=46 Score=22.28 Aligned_cols=33 Identities=3% Similarity=0.141 Sum_probs=26.6
Q ss_pred EEcCCCHHHHHHHHHHHHhCCCcEEEecCCCCC
Q psy6765 186 VLKPKTTEEVSAILRYCNEQKIAVCPQGGNTGV 218 (246)
Q Consensus 186 vv~P~s~~~v~~~v~~a~~~~~~~~~~ggG~~~ 218 (246)
+-..+|.+|+.++++--++++-|++.+-.|-+-
T Consensus 31 irtatssqdirdiiksmkdngkplvvfvngasq 63 (112)
T 2lnd_A 31 IRTATSSQDIRDIIKSMKDNGKPLVVFVNGASQ 63 (112)
T ss_dssp EEEECSHHHHHHHHHHHTTCCSCEEEEECSCCH
T ss_pred eeeccchhhHHHHHHHHHhcCCeEEEEecCccc
Confidence 444578999999999999999999888766553
No 137
>2pbq_A Molybdenum cofactor biosynthesis MOG; molybdopterin, MPT, structural genomics, NPPSFA, national PR protein structural and functional analyses; 1.70A {Aquifex aeolicus} PDB: 2qq1_A 3mci_A 3mcj_A 3k6a_A* 2f7w_A 2f7y_A 2fuw_A
Probab=26.70 E-value=1.2e+02 Score=22.93 Aligned_cols=37 Identities=14% Similarity=0.192 Sum_probs=30.5
Q ss_pred CccEEEeCCCHHHHHHHHHHHHhC-CCcEEEecCCCCC
Q psy6765 65 KSKLVLKPKTTEEVSAILRYCNEQ-KIAVCPQGGNTGV 101 (246)
Q Consensus 65 ~p~~vv~P~s~~ev~~~v~~a~~~-~i~v~~~GgG~~~ 101 (246)
.+...+.|.+.+++.+.++.+.+. +.-+++-.||+|.
T Consensus 43 ~v~~~iv~Dd~~~I~~~l~~~~~~~~~DlVittGG~g~ 80 (178)
T 2pbq_A 43 EVEYRVIPDERDLIEKTLIELADEKGCSLILTTGGTGP 80 (178)
T ss_dssp EEEEEEECSCHHHHHHHHHHHHHTSCCSEEEEESCCSS
T ss_pred EEEEEEcCCCHHHHHHHHHHHHhcCCCCEEEECCCCCC
Confidence 335568899999999999988763 5678999999998
No 138
>1uuy_A CNX1, molybdopterin biosynthesis CNX1; chelatase, molybdenum cofactor biosynthesis; HET: MTE AMP; 1.45A {Arabidopsis thaliana} SCOP: c.57.1.1 PDB: 1o8q_A 1o8n_A 1o8o_A 1uux_A* 1eav_A
Probab=26.68 E-value=1e+02 Score=23.09 Aligned_cols=36 Identities=19% Similarity=0.352 Sum_probs=30.8
Q ss_pred ceEEcCCCHHHHHHHHHHHHh-CCCcEEEecCCCCCC
Q psy6765 184 KLVLKPKTTEEVSAILRYCNE-QKIAVCPQGGNTGVV 219 (246)
Q Consensus 184 ~~vv~P~s~~~v~~~v~~a~~-~~~~~~~~ggG~~~~ 219 (246)
...+.|.+.+++.+.++.+.+ .+.-+++-.||+|.+
T Consensus 48 ~~~iv~Dd~~~i~~~l~~~~~~~~~DlVittGG~g~g 84 (167)
T 1uuy_A 48 ATAVVPDEVERIKDILQKWSDVDEMDLILTLGGTGFT 84 (167)
T ss_dssp EEEEECSCHHHHHHHHHHHHHTSCCSEEEEESCCSSS
T ss_pred EEEEcCCCHHHHHHHHHHHHhcCCCCEEEECCCCCCC
Confidence 457889999999999998765 578999999999984
No 139
>3rfq_A Pterin-4-alpha-carbinolamine dehydratase MOAB2; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: B3P; 2.25A {Mycobacterium marinum} PDB: 3tcr_A
Probab=26.49 E-value=99 Score=23.89 Aligned_cols=36 Identities=17% Similarity=0.168 Sum_probs=30.6
Q ss_pred ceEEcCCCHHHHHHHHHHHHhCCCcEEEecCCCCCC
Q psy6765 184 KLVLKPKTTEEVSAILRYCNEQKIAVCPQGGNTGVV 219 (246)
Q Consensus 184 ~~vv~P~s~~~v~~~v~~a~~~~~~~~~~ggG~~~~ 219 (246)
...+.|.+.+++.+.++.+.+.+.-++.-.||+|..
T Consensus 67 ~~~iv~Dd~~~I~~al~~a~~~~~DlVIttGGts~g 102 (185)
T 3rfq_A 67 GVVAVEADEVDIRNALNTAVIGGVDLVVSVGGTGVT 102 (185)
T ss_dssp EEEEECSCHHHHHHHHHHHHHTTCSEEEEESCCSSS
T ss_pred EEEEeCCCHHHHHHHHHHHHhCCCCEEEECCCCCCC
Confidence 456789999999999988766678899999999984
No 140
>2ozl_B PDHE1-B, pyruvate dehydrogenase E1 component subunit beta; pyruvate_dehydrogenase_complex, human, multienzyme_complex_component; HET: TPP; 1.90A {Homo sapiens} SCOP: c.36.1.7 c.48.1.2 PDB: 1ni4_B* 3exe_B* 3exf_B* 3exg_B 3exh_B* 3exi_B
Probab=26.24 E-value=68 Score=27.28 Aligned_cols=31 Identities=13% Similarity=0.190 Sum_probs=27.3
Q ss_pred ceEEcCCCHHHHHHHHHHHHhCCCcEEEecC
Q psy6765 184 KLVLKPKTTEEVSAILRYCNEQKIAVCPQGG 214 (246)
Q Consensus 184 ~~vv~P~s~~~v~~~v~~a~~~~~~~~~~gg 214 (246)
..|+.|.+.+|...+++.|-+++-|++.+-.
T Consensus 154 l~V~~Psd~~e~~~~l~~a~~~~~Pv~i~~~ 184 (341)
T 2ozl_B 154 LKVVSPWNSEDAKGLIKSAIRDNNPVVVLEN 184 (341)
T ss_dssp CEEECCCSHHHHHHHHHHHHHSSSCEEEEEC
T ss_pred CEEEEeCCHHHHHHHHHHHHhcCCCEEEEEC
Confidence 4699999999999999999998899988753
No 141
>2pjk_A 178AA long hypothetical molybdenum cofactor biosynthesis protein B; 3D-structure, structural genomics, NPPSFA; HET: PEG; 1.90A {Sulfolobus tokodaii} PDB: 3iwt_A*
Probab=26.15 E-value=1e+02 Score=23.54 Aligned_cols=36 Identities=17% Similarity=0.171 Sum_probs=30.3
Q ss_pred ceEEcCCCHHHHHHHHHHHHhC-CCcEEEecCCCCCC
Q psy6765 184 KLVLKPKTTEEVSAILRYCNEQ-KIAVCPQGGNTGVV 219 (246)
Q Consensus 184 ~~vv~P~s~~~v~~~v~~a~~~-~~~~~~~ggG~~~~ 219 (246)
...+.|.+.+++.+.++.+.+. +.-+++-.||+|..
T Consensus 58 ~~~iv~Dd~~~I~~al~~a~~~~~~DlVittGG~s~g 94 (178)
T 2pjk_A 58 GYSLVPDDKIKILKAFTDALSIDEVDVIISTGGTGYS 94 (178)
T ss_dssp EEEEECSCHHHHHHHHHHHHTCTTCCEEEEESCCSSS
T ss_pred EEEEeCCCHHHHHHHHHHHHhcCCCCEEEECCCCCCC
Confidence 4567899999999999877665 68999999999984
No 142
>2ox1_A 3-dehydroquinate dehydratase; (beta-alpha)8 barrel, lyase; 2.33A {Archaeoglobus fulgidus}
Probab=26.06 E-value=63 Score=25.24 Aligned_cols=37 Identities=16% Similarity=0.100 Sum_probs=30.5
Q ss_pred ccCccceEEcCCCHHHHHHHHHHHHhCCCcEEEecCCC
Q psy6765 179 LSGKSKLVLKPKTTEEVSAILRYCNEQKIAVCPQGGNT 216 (246)
Q Consensus 179 ~~~~p~~vv~P~s~~~v~~~v~~a~~~~~~~~~~ggG~ 216 (246)
.+-.++.++.|.+.+|+..++++.++.. |++..+-|.
T Consensus 117 ~gDivKia~~a~~~~D~l~ll~~~~~~~-p~I~~~MG~ 153 (196)
T 2ox1_A 117 RGDLVKIATMGKSKRDVETIVRILTNYD-DVVAFLMGE 153 (196)
T ss_dssp CSSEEEEEEECCSHHHHHHHHHHHHHCS-SEEEEEESG
T ss_pred cCCEEEEEEcCCCHHHHHHHHHHHhhCC-CeEEEEcCC
Confidence 3457889999999999999999988776 888777554
No 143
>2is8_A Molybdopterin biosynthesis enzyme, MOAB; globular alpha/beta fold, structu genomics, NPPSFA; 1.64A {Thermus thermophilus} PDB: 3mch_A
Probab=26.02 E-value=1.1e+02 Score=22.76 Aligned_cols=35 Identities=20% Similarity=0.394 Sum_probs=29.6
Q ss_pred cEEEeCCCHHHHHHHHHHHHhC-CCcEEEecCCCCC
Q psy6765 67 KLVLKPKTTEEVSAILRYCNEQ-KIAVCPQGGNTGV 101 (246)
Q Consensus 67 ~~vv~P~s~~ev~~~v~~a~~~-~i~v~~~GgG~~~ 101 (246)
...+.|.+.+++.+.++.+.+. +.-+++-.||+|.
T Consensus 39 ~~~iv~Dd~~~i~~~l~~~~~~~~~DlVittGG~g~ 74 (164)
T 2is8_A 39 AYELVPDEPPMIKKVLRLWADREGLDLILTNGGTGL 74 (164)
T ss_dssp EEEEECSCHHHHHHHHHHHHHTSCCSEEEEESCCSS
T ss_pred EEEEcCCCHHHHHHHHHHHHhcCCCCEEEEcCCCCC
Confidence 3467799999999999988764 5678999999998
No 144
>3m05_A Uncharacterized protein PEPE_1480; structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics; 3.15A {Pediococcus pentosaceus}
Probab=25.89 E-value=22 Score=25.53 Aligned_cols=33 Identities=15% Similarity=0.140 Sum_probs=24.8
Q ss_pred ccEEEeCCCHHHHHHHHHHHHhCCCcEEEecCC
Q psy6765 66 SKLVLKPKTTEEVSAILRYCNEQKIAVCPQGGN 98 (246)
Q Consensus 66 p~~vv~P~s~~ev~~~v~~a~~~~i~v~~~GgG 98 (246)
-.+|++|...++|.++|.-+-=++..+...||+
T Consensus 9 I~AIIrp~kld~V~~AL~~~G~~~t~v~~~gGf 41 (114)
T 3m05_A 9 VIAIVQDKDANYLSDQFIDQNVRATKLSTTGGF 41 (114)
T ss_dssp EEEEEEHHHHHHHHHHHHHTTCCEEEEEEEETT
T ss_pred EEEEECHHHHHHHHHHHHHCCCCEEEEEEeccc
Confidence 468999999999999988776555555555543
No 145
>2duw_A Putative COA-binding protein; ligand binding protein; NMR {Klebsiella pneumoniae}
Probab=25.42 E-value=1.7e+02 Score=21.14 Aligned_cols=79 Identities=9% Similarity=-0.049 Sum_probs=44.1
Q ss_pred CCeEEEcC----CccHHHHHHHHhhcCc-eeecCCCc--hhHHhhHHhhhhhh-ccccccCccceEEcCCCHHHHHHHHH
Q psy6765 129 SGNVNSMS----NALVTNRSLELSNTGV-VVLGVPLY--DEVIVSASLMNKIL-NFDELSGKSKLVLKPKTTEEVSAILR 200 (246)
Q Consensus 129 ~~~v~v~a----G~~~~~l~~~L~~~gl-~~~~~p~s--~~~~~~~~~~~~~~-~~~~~~~~p~~vv~P~s~~~v~~~v~ 200 (246)
...+.+++ |.....+.+.|.+.|+ .++..|.. ... .+ ...| +-.+....++.++.....+.+.++++
T Consensus 14 ~~IavIGas~~~g~~G~~~~~~L~~~G~~v~~vnp~~~g~~i--~G---~~~~~sl~el~~~~Dlvii~vp~~~v~~v~~ 88 (145)
T 2duw_A 14 RTIALVGASDKPDRPSYRVMKYLLDQGYHVIPVSPKVAGKTL--LG---QQGYATLADVPEKVDMVDVFRNSEAAWGVAQ 88 (145)
T ss_dssp CCEEEESCCSCTTSHHHHHHHHHHHHTCCEEEECSSSTTSEE--TT---EECCSSTTTCSSCCSEEECCSCSTHHHHHHH
T ss_pred CEEEEECcCCCCCChHHHHHHHHHHCCCEEEEeCCccccccc--CC---eeccCCHHHcCCCCCEEEEEeCHHHHHHHHH
Confidence 34667777 4445556666666554 55556654 221 00 1112 22233345677777666788888888
Q ss_pred HHHhCCCcEEEe
Q psy6765 201 YCNEQKIAVCPQ 212 (246)
Q Consensus 201 ~a~~~~~~~~~~ 212 (246)
.|.+.+++-+..
T Consensus 89 ~~~~~g~~~i~i 100 (145)
T 2duw_A 89 EAIAIGAKTLWL 100 (145)
T ss_dssp HHHHHTCCEEEC
T ss_pred HHHHcCCCEEEE
Confidence 777777654443
No 146
>1c7s_A Beta-N-acetylhexosaminidase; glycosyl hydrolase, chitinolysis, A/B(TIM)-barrel, site directed mutagenesis; HET: CBS; 1.80A {Serratia marcescens} SCOP: b.1.18.2 b.2.2.3 c.1.8.6 d.92.2.1 PDB: 1c7t_A* 1qba_A 1qbb_A*
Probab=25.14 E-value=46 Score=32.41 Aligned_cols=29 Identities=17% Similarity=0.324 Sum_probs=24.3
Q ss_pred CCHHHHHHHHHHHHhCCCcEEEec--CCCCC
Q psy6765 190 KTTEEVSAILRYCNEQKIAVCPQG--GNTGV 218 (246)
Q Consensus 190 ~s~~~v~~~v~~a~~~~~~~~~~g--gG~~~ 218 (246)
=|.+|+.+++++|++++|.|+|-= =||..
T Consensus 397 YT~~direIv~YA~~rgI~VIPEID~PGH~~ 427 (858)
T 1c7s_A 397 FSRQDYIDIIKYAQARQIEVIPEIDMPAHAR 427 (858)
T ss_dssp BCHHHHHHHHHHHHTTTCEEEEEEEESSSCH
T ss_pred CCHHHHHHHHHHHHHcCCEEEEcccccchHH
Confidence 489999999999999999999852 25544
No 147
>3pzy_A MOG; ssgcid, seattle structural genomics center for infectious DI biosynthetic protein; 1.80A {Mycobacterium avium subsp} PDB: 3oi9_A 2g4r_A
Probab=24.89 E-value=96 Score=23.31 Aligned_cols=35 Identities=20% Similarity=0.294 Sum_probs=28.8
Q ss_pred ceEEcCCCHHHHHHHHHHHHhCCCcEEEecCCCCCC
Q psy6765 184 KLVLKPKTTEEVSAILRYCNEQKIAVCPQGGNTGVV 219 (246)
Q Consensus 184 ~~vv~P~s~~~v~~~v~~a~~~~~~~~~~ggG~~~~ 219 (246)
...+.|.+ +++.+.++.+.+.+.-++.-.||+|..
T Consensus 45 ~~~iv~Dd-~~i~~al~~a~~~~~DlVittGG~s~g 79 (164)
T 3pzy_A 45 QPEVVADG-SPVGEALRKAIDDDVDVILTSGGTGIA 79 (164)
T ss_dssp CCEEECSS-HHHHHHHHHHHHTTCSEEEEESCCSSS
T ss_pred EEEEeCCH-HHHHHHHHHHHhCCCCEEEECCCCCCC
Confidence 34566889 999999988766678899999999984
No 148
>3o1n_A 3-dehydroquinate dehydratase; structural genomics, center for structural genomics of infec diseases, csgid, TIM barrel, lyase; 1.03A {Salmonella enterica subsp} PDB: 3s42_A 3l2i_A* 3lb0_A 4guf_A 4gug_A* 4guh_A* 3nnt_A* 4guj_A* 3m7w_A 3oex_A 4gfs_A* 4gui_A* 1gqn_A 1l9w_A* 1qfe_A*
Probab=24.87 E-value=70 Score=26.47 Aligned_cols=34 Identities=18% Similarity=0.232 Sum_probs=26.4
Q ss_pred CccEEEeCCCHHHHHHHHHHHHh-----CCCcEEEecCC
Q psy6765 65 KSKLVLKPKTTEEVSAILRYCNE-----QKIAVCPQGGN 98 (246)
Q Consensus 65 ~p~~vv~P~s~~ev~~~v~~a~~-----~~i~v~~~GgG 98 (246)
.++.++.|.+.+|+..++++.++ .+.|++..+-|
T Consensus 192 IvKia~~a~s~~Dvl~Ll~~~~~~~~~~~~~PlIa~~MG 230 (276)
T 3o1n_A 192 IPKIAVMPQTKADVLTLLTATVEMQERYADRPIITMSMS 230 (276)
T ss_dssp EEEEEECCSSHHHHHHHHHHHHHHHHHTCCSCCEEEECS
T ss_pred EEEEEecCCChHHHHHHHHHHHHHHhcCCCCCEEEEECC
Confidence 56889999999999999998765 46677665544
No 149
>1sfl_A 3-dehydroquinate dehydratase; 3-dehydroquinase, enzyme turnover, shikimate pathway, lyase; 1.90A {Staphylococcus aureus subsp} SCOP: c.1.10.1 PDB: 1sfj_A*
Probab=24.71 E-value=89 Score=25.08 Aligned_cols=37 Identities=16% Similarity=0.134 Sum_probs=30.8
Q ss_pred CccceEEcCCCHHHHHHHHHHHHh----CCCcEEEecCCCC
Q psy6765 181 GKSKLVLKPKTTEEVSAILRYCNE----QKIAVCPQGGNTG 217 (246)
Q Consensus 181 ~~p~~vv~P~s~~~v~~~v~~a~~----~~~~~~~~ggG~~ 217 (246)
-.++.++.|.+.+|+..++++.++ .+.|++..+-|..
T Consensus 157 DivKia~~a~~~~D~l~ll~~~~~~~~~~~~P~I~~~MG~~ 197 (238)
T 1sfl_A 157 EYVKLAVMPHNKNDVLNLLQAMSTFSDTMDCKVVGISMSKL 197 (238)
T ss_dssp SEEEEEECCSSHHHHHHHHHHHHHHHHHCSSEEEEEECTGG
T ss_pred CEEEEEecCCCHHHHHHHHHHHHHHhhcCCCCEEEEECCCC
Confidence 367899999999999999998755 4789998887653
No 150
>1uuy_A CNX1, molybdopterin biosynthesis CNX1; chelatase, molybdenum cofactor biosynthesis; HET: MTE AMP; 1.45A {Arabidopsis thaliana} SCOP: c.57.1.1 PDB: 1o8q_A 1o8n_A 1o8o_A 1uux_A* 1eav_A
Probab=24.65 E-value=1.2e+02 Score=22.62 Aligned_cols=35 Identities=20% Similarity=0.362 Sum_probs=29.5
Q ss_pred cEEEeCCCHHHHHHHHHHHHh-CCCcEEEecCCCCC
Q psy6765 67 KLVLKPKTTEEVSAILRYCNE-QKIAVCPQGGNTGV 101 (246)
Q Consensus 67 ~~vv~P~s~~ev~~~v~~a~~-~~i~v~~~GgG~~~ 101 (246)
...+.|.+.+++.+.++.+.+ .+.-+++-.||+|.
T Consensus 48 ~~~iv~Dd~~~i~~~l~~~~~~~~~DlVittGG~g~ 83 (167)
T 1uuy_A 48 ATAVVPDEVERIKDILQKWSDVDEMDLILTLGGTGF 83 (167)
T ss_dssp EEEEECSCHHHHHHHHHHHHHTSCCSEEEEESCCSS
T ss_pred EEEEcCCCHHHHHHHHHHHHhcCCCCEEEECCCCCC
Confidence 346779999999999998875 46779999999998
No 151
>3rfq_A Pterin-4-alpha-carbinolamine dehydratase MOAB2; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: B3P; 2.25A {Mycobacterium marinum} PDB: 3tcr_A
Probab=24.61 E-value=1.2e+02 Score=23.39 Aligned_cols=35 Identities=17% Similarity=0.172 Sum_probs=29.1
Q ss_pred cEEEeCCCHHHHHHHHHHHHhCCCcEEEecCCCCC
Q psy6765 67 KLVLKPKTTEEVSAILRYCNEQKIAVCPQGGNTGV 101 (246)
Q Consensus 67 ~~vv~P~s~~ev~~~v~~a~~~~i~v~~~GgG~~~ 101 (246)
...+.|.+.+++.+.++.+.+.+.-+++-.||+|.
T Consensus 67 ~~~iv~Dd~~~I~~al~~a~~~~~DlVIttGGts~ 101 (185)
T 3rfq_A 67 GVVAVEADEVDIRNALNTAVIGGVDLVVSVGGTGV 101 (185)
T ss_dssp EEEEECSCHHHHHHHHHHHHHTTCSEEEEESCCSS
T ss_pred EEEEeCCCHHHHHHHHHHHHhCCCCEEEECCCCCC
Confidence 44677999999999998886555678999999998
No 152
>2pjk_A 178AA long hypothetical molybdenum cofactor biosynthesis protein B; 3D-structure, structural genomics, NPPSFA; HET: PEG; 1.90A {Sulfolobus tokodaii} PDB: 3iwt_A*
Probab=24.42 E-value=1.2e+02 Score=23.12 Aligned_cols=35 Identities=17% Similarity=0.186 Sum_probs=29.3
Q ss_pred cEEEeCCCHHHHHHHHHHHHhC-CCcEEEecCCCCC
Q psy6765 67 KLVLKPKTTEEVSAILRYCNEQ-KIAVCPQGGNTGV 101 (246)
Q Consensus 67 ~~vv~P~s~~ev~~~v~~a~~~-~i~v~~~GgG~~~ 101 (246)
...+.|.+.+++.+.++.+.+. +.-+++-.||+|.
T Consensus 58 ~~~iv~Dd~~~I~~al~~a~~~~~~DlVittGG~s~ 93 (178)
T 2pjk_A 58 GYSLVPDDKIKILKAFTDALSIDEVDVIISTGGTGY 93 (178)
T ss_dssp EEEEECSCHHHHHHHHHHHHTCTTCCEEEEESCCSS
T ss_pred EEEEeCCCHHHHHHHHHHHHhcCCCCEEEECCCCCC
Confidence 4457899999999999888765 5778999999998
No 153
>3iv7_A Alcohol dehydrogenase IV; NP_602249.1, iron-containing alcohol dehydrogenase, structur genomics, joint center for structural genomics; HET: MSE; 2.07A {Corynebacterium glutamicum}
Probab=24.35 E-value=1.3e+02 Score=25.73 Aligned_cols=82 Identities=11% Similarity=-0.002 Sum_probs=43.6
Q ss_pred eEEEcCCccHHHHHHHHhhc---CceeecCCCchhHHhhHHhhhhhhccccccCccceEEcCCCHHHHHHHHHHHHhCCC
Q psy6765 131 NVNSMSNALVTNRSLELSNT---GVVVLGVPLYDEVIVSASLMNKILNFDELSGKSKLVLKPKTTEEVSAILRYCNEQKI 207 (246)
Q Consensus 131 ~v~v~aG~~~~~l~~~L~~~---gl~~~~~p~s~~~~~~~~~~~~~~~~~~~~~~p~~vv~P~s~~~v~~~v~~a~~~~~ 207 (246)
.+.++.|+....+.+.+.+. ...+-.++..... . ........ .+ ...+.+..-.+.+.|.++++.++++++
T Consensus 16 ~i~~G~g~~~~~l~~~l~~~g~~rvliVtd~~~~~~-~--~~v~~~L~--~~-~~f~~v~~~p~~~~v~~~~~~~~~~~~ 89 (364)
T 3iv7_A 16 KVMFGYGKSSAFLKQEVERRGSAKVMVIAGEREMSI-A--HKVASEIE--VA-IWHDEVVMHVPIEVAERARAVATDNEI 89 (364)
T ss_dssp EEEEETTCHHHHHHHHHHHHTCSSEEEECCGGGHHH-H--HHHTTTSC--CS-EEECCCCTTCBHHHHHHHHHHHHHTTC
T ss_pred eEEEeCChHHHHHHHHHHHcCCCEEEEEECCCHHHH-H--HHHHHHcC--CC-EEEcceecCCCHHHHHHHHHHHHhcCC
Confidence 57889998755555555543 3455555543211 0 10111111 00 000111111368999999999998887
Q ss_pred -cEEEecCCCCC
Q psy6765 208 -AVCPQGGNTGV 218 (246)
Q Consensus 208 -~~~~~ggG~~~ 218 (246)
-|+..|||+..
T Consensus 90 D~IIavGGGs~i 101 (364)
T 3iv7_A 90 DLLVCVGGGSTI 101 (364)
T ss_dssp CEEEEEESHHHH
T ss_pred CEEEEeCCcHHH
Confidence 45677888643
No 154
>1y5e_A Molybdenum cofactor biosynthesis protein B; structural genomics, protein structure initiative, PSI, MCSG, midwest center for structural genomics; 1.90A {Bacillus cereus} SCOP: c.57.1.1
Probab=24.30 E-value=1.2e+02 Score=22.84 Aligned_cols=36 Identities=14% Similarity=0.238 Sum_probs=30.5
Q ss_pred ceEEcCCCHHHHHHHHHHHHh-CCCcEEEecCCCCCC
Q psy6765 184 KLVLKPKTTEEVSAILRYCNE-QKIAVCPQGGNTGVV 219 (246)
Q Consensus 184 ~~vv~P~s~~~v~~~v~~a~~-~~~~~~~~ggG~~~~ 219 (246)
...+.|.+.+++.+.++.+.+ .+.-+++-.||+|.+
T Consensus 49 ~~~iv~Dd~~~i~~~l~~~~~~~~~DlVittGG~g~g 85 (169)
T 1y5e_A 49 SYEIVKDDKESIQQAVLAGYHKEDVDVVLTNGGTGIT 85 (169)
T ss_dssp EEEEECSSHHHHHHHHHHHHTCTTCSEEEEECCCSSS
T ss_pred EEEEeCCCHHHHHHHHHHHHhcCCCCEEEEcCCCCCC
Confidence 457789999999999998766 478899999999984
No 155
>2lbw_A H/ACA ribonucleoprotein complex subunit 2; L7AE, snoRNP, scaRNP, RNA binding protein; NMR {Saccharomyces cerevisiae} PDB: 2lbx_A
Probab=24.23 E-value=54 Score=23.44 Aligned_cols=36 Identities=17% Similarity=0.230 Sum_probs=28.4
Q ss_pred CCCccEEEeCCCHHH---HHHHHHHHHhCCCcEEEecCC
Q psy6765 63 EGKSKLVLKPKTTEE---VSAILRYCNEQKIAVCPQGGN 98 (246)
Q Consensus 63 ~~~p~~vv~P~s~~e---v~~~v~~a~~~~i~v~~~GgG 98 (246)
.+.+..|+...+.++ +..+..+|.++++|+...+..
T Consensus 34 ~gkakLViiA~D~~~~~~~~~l~~lc~~~~VP~~~v~sk 72 (121)
T 2lbw_A 34 KGEKGLVVIAGDIWPADVISHIPVLCEDHSVPYIFIPSK 72 (121)
T ss_dssp HSCCCEEEECTTCSCTTHHHHHHHHHHHTCCCEEECCCH
T ss_pred cCCceEEEEeCCCCHHHHHHHHHHHHHhcCCcEEEECCH
Confidence 457888888887654 667889999999999887653
No 156
>1w85_B Pyruvate dehydrogenase E1 component, beta subunit; dehydrogenase, multienzyme complex, oxidoreductase; HET: TDP; 2.0A {Geobacillus stearothermophilus} SCOP: c.36.1.7 c.48.1.2 PDB: 1w88_B* 3dva_B* 3dv0_B* 3duf_B*
Probab=24.05 E-value=78 Score=26.55 Aligned_cols=31 Identities=16% Similarity=0.083 Sum_probs=27.5
Q ss_pred cc-ceEEcCCCHHHHHHHHHHHHhCCCcEEEe
Q psy6765 182 KS-KLVLKPKTTEEVSAILRYCNEQKIAVCPQ 212 (246)
Q Consensus 182 ~p-~~vv~P~s~~~v~~~v~~a~~~~~~~~~~ 212 (246)
.| ..|+.|.+.+|...+++.+-+++-|++.+
T Consensus 139 iP~l~V~~Psd~~e~~~~l~~a~~~~~Pv~i~ 170 (324)
T 1w85_B 139 QPGLKVVIPSTPYDAKGLLISAIRDNDPVIFL 170 (324)
T ss_dssp STTCEEECCSSHHHHHHHHHHHHHSSSCEEEE
T ss_pred CCCCEEEeeCCHHHHHHHHHHHHHcCCCEEEE
Confidence 45 47999999999999999999999999884
No 157
>3pzy_A MOG; ssgcid, seattle structural genomics center for infectious DI biosynthetic protein; 1.80A {Mycobacterium avium subsp} PDB: 3oi9_A 2g4r_A
Probab=24.03 E-value=1e+02 Score=23.12 Aligned_cols=33 Identities=21% Similarity=0.296 Sum_probs=27.4
Q ss_pred EEEeCCCHHHHHHHHHHHHhCCCcEEEecCCCCC
Q psy6765 68 LVLKPKTTEEVSAILRYCNEQKIAVCPQGGNTGV 101 (246)
Q Consensus 68 ~vv~P~s~~ev~~~v~~a~~~~i~v~~~GgG~~~ 101 (246)
..+.|.+ +++.+.++.+.+.+.-+++-.||+|.
T Consensus 46 ~~iv~Dd-~~i~~al~~a~~~~~DlVittGG~s~ 78 (164)
T 3pzy_A 46 PEVVADG-SPVGEALRKAIDDDVDVILTSGGTGI 78 (164)
T ss_dssp CEEECSS-HHHHHHHHHHHHTTCSEEEEESCCSS
T ss_pred EEEeCCH-HHHHHHHHHHHhCCCCEEEECCCCCC
Confidence 4566999 99999998887655678999999998
No 158
>1qs0_B 2-oxoisovalerate dehydrogenase beta-subunit; heterotetramer, THDP cofactor, oxidoreductase; HET: TDP; 2.40A {Pseudomonas putida} SCOP: c.36.1.7 c.48.1.2 PDB: 2bp7_B
Probab=23.97 E-value=80 Score=26.66 Aligned_cols=28 Identities=14% Similarity=0.018 Sum_probs=25.9
Q ss_pred ceEEcCCCHHHHHHHHHHHHhCCCcEEE
Q psy6765 184 KLVLKPKTTEEVSAILRYCNEQKIAVCP 211 (246)
Q Consensus 184 ~~vv~P~s~~~v~~~v~~a~~~~~~~~~ 211 (246)
..|+.|.+.+|...+++.|-+++-|++.
T Consensus 144 l~V~~Psd~~e~~~~l~~A~~~~~Pv~i 171 (338)
T 1qs0_B 144 LRTVMPSNPYDAKGLLIASIECDDPVIF 171 (338)
T ss_dssp CEEECCCSHHHHHHHHHHHHHSSSCEEE
T ss_pred CEEEeeCCHHHHHHHHHHHHhcCCcEEE
Confidence 4699999999999999999998999998
No 159
>2yv1_A Succinyl-COA ligase [ADP-forming] subunit alpha; COA-binding domain, structural genomics, NPPSFA; 1.70A {Methanocaldococcus jannaschii}
Probab=23.87 E-value=2.3e+02 Score=23.28 Aligned_cols=85 Identities=13% Similarity=0.027 Sum_probs=45.5
Q ss_pred EEEcCCccHHHHHHHHhhcCceee--cCCCchhH-HhhHHhhhhhhccccccCccceEEc-CCCHHHHHHHHHHHHhCCC
Q psy6765 132 VNSMSNALVTNRSLELSNTGVVVL--GVPLYDEV-IVSASLMNKILNFDELSGKSKLVLK-PKTTEEVSAILRYCNEQKI 207 (246)
Q Consensus 132 v~v~aG~~~~~l~~~L~~~gl~~~--~~p~s~~~-~~~~~~~~~~~~~~~~~~~p~~vv~-P~s~~~v~~~v~~a~~~~~ 207 (246)
+..|.|.....+...+...|+-+. ..-+.+.. -++-.+...++..+.........+. ..+.++. ..+++++.+.
T Consensus 155 ~vSqSG~l~~~~~~~~~~~g~G~s~~vs~G~~~~~~~~~~d~l~~~~~D~~T~~I~l~~E~~g~~~~~--~~~~~~~~~K 232 (294)
T 2yv1_A 155 MVSRSGTLTYEIAHQIKKAGFGVSTCVGIGGDPIVGLRYKEVLDLFEKDDETEAIVMIGEIGGGAEEE--AAKFIEKMKK 232 (294)
T ss_dssp EEESCSHHHHHHHHHHHHTTCCEEEEEECCSSSSCSSCHHHHHHHHHTCTTCSEEEEEEESSSSHHHH--HHHHHTTCSS
T ss_pred EEECCHHHHHHHHHHHHhCCCCeEEEEeeCCCCCCCCCHHHHHHHHhcCCCCCEEEEEEeeCCCHHHH--HHHHHHhCCC
Confidence 668899999999988887665332 22222210 0122334556554433222222222 2344432 5666666788
Q ss_pred cEEEecCCCCC
Q psy6765 208 AVCPQGGNTGV 218 (246)
Q Consensus 208 ~~~~~ggG~~~ 218 (246)
|++.+=.|.+-
T Consensus 233 PVv~~k~G~~~ 243 (294)
T 2yv1_A 233 PVIGYIAGQSA 243 (294)
T ss_dssp CEEEEEECC--
T ss_pred CEEEEEecCCC
Confidence 99887766665
No 160
>2o1x_A 1-deoxy-D-xylulose-5-phosphate synthase; thiamin, isoprenoid, DXS, transferase; HET: TDP; 2.90A {Deinococcus radiodurans}
Probab=23.68 E-value=70 Score=29.68 Aligned_cols=81 Identities=10% Similarity=-0.009 Sum_probs=48.3
Q ss_pred CCCc-cEEEeCCCHHHHHHHHHHHHhCCCcEEEecCCCCCCCCcccCCCeEEEecCCCCCceeeeCCCCeEEEcCCccHH
Q psy6765 63 EGKS-KLVLKPKTTEEVSAILRYCNEQKIAVCPQGGNTGVVAGGVPLYDEVIVSASLMNKILNFDELSGNVNSMSNALVT 141 (246)
Q Consensus 63 ~~~p-~~vv~P~s~~ev~~~v~~a~~~~i~v~~~GgG~~~~g~~~~~~~gvvidl~~m~~i~~id~~~~~v~v~aG~~~~ 141 (246)
...| ..|+.|.+.+|+..+++.|-+.+-|+.+|-....+.. .+.++...+ .+.+-..+.++...+.+..|....
T Consensus 444 r~iP~l~v~~P~d~~e~~~~~~~a~~~~~Pv~i~~~r~~~~~--~~~~~~~~~---~~G~~~~~~~g~dv~iva~G~~v~ 518 (629)
T 2o1x_A 444 RSIPGVRIGLPKDAAELRGMLKYAQTHDGPFAIRYPRGNTAQ--VPAGTWPDL---KWGEWERLKGGDDVVILAGGKALD 518 (629)
T ss_dssp TTSTTCEEECCSSHHHHHHHHHHHHHSSSCEEEECCSSBCCC--CCTTCCCCC---CTTCCEEEECCSSEEEEECHHHHH
T ss_pred HccCCcEEEecCCHHHHHHHHHHHHhCCCCEEEEecCCCCCC--Ccccccccc---cCCceEEEeeCCCEEEEEecHHHH
Confidence 3445 5689999999999999999999999999865544311 110110001 111211222344556677777776
Q ss_pred HHHHHHh
Q psy6765 142 NRSLELS 148 (246)
Q Consensus 142 ~l~~~L~ 148 (246)
...++..
T Consensus 519 ~a~~Aa~ 525 (629)
T 2o1x_A 519 YALKAAE 525 (629)
T ss_dssp HHHHHHT
T ss_pred HHHHHHH
Confidence 5555544
No 161
>3imk_A Putative molybdenum carrier protein; YP_461806.1, structural genomics, joint center for structural genomics, JCSG; HET: MSE MES PG4 PG6; 1.45A {Syntrophus aciditrophicus SB}
Probab=23.64 E-value=1.1e+02 Score=23.07 Aligned_cols=35 Identities=17% Similarity=0.176 Sum_probs=31.0
Q ss_pred cCccceEEcCCC---HHHHHHHHHHHHhCCCcEEEecC
Q psy6765 180 SGKSKLVLKPKT---TEEVSAILRYCNEQKIAVCPQGG 214 (246)
Q Consensus 180 ~~~p~~vv~P~s---~~~v~~~v~~a~~~~~~~~~~gg 214 (246)
..+|..++.+.. .+++..+.+|..+|++.+.-..|
T Consensus 99 ~~KP~l~i~l~~~~~~~~~~~v~~wl~~~~i~vLNVAG 136 (158)
T 3imk_A 99 YKKPCLHIDLDRISIEDAATLINSWTVSHHIQVLNIAG 136 (158)
T ss_dssp TTCCEEEEETTTSCHHHHHHHHHHHHHHTTCCEEEEEC
T ss_pred hCCCEEEEecccccccchHHHHHHHHHHCCceEEEecc
Confidence 468889999987 89999999999999999998765
No 162
>1rm6_B 4-hydroxybenzoyl-COA reductase beta subunit; xanthine oxidase family, dimer heterotrimers, oxidoreductase; HET: PCD FAD SF4 EPE; 1.60A {Thauera aromatica} SCOP: d.87.2.1 d.145.1.3 PDB: 1sb3_B*
Probab=23.17 E-value=64 Score=27.41 Aligned_cols=55 Identities=16% Similarity=0.130 Sum_probs=36.3
Q ss_pred cceEEcCCCHHHHHHHHHHHHhCCCcEEEecCCCCCCCC--cccCCCcEEEEcCCc---Ccceecc
Q psy6765 183 SKLVLKPKTTEEVSAILRYCNEQKIAVCPQGGNTGVVAG--GVPLYDEVIVSASLM---NKILNFD 243 (246)
Q Consensus 183 p~~vv~P~s~~~v~~~v~~a~~~~~~~~~~ggG~~~~~~--~~~~~~gv~idl~~m---~~i~~~d 243 (246)
+...++|.|.+|..++++ +. .-.+.+|||.+... .-......+||++++ +.| +.+
T Consensus 6 ~f~y~~P~sl~ea~~ll~---~~--~a~~lAGGT~l~~~~k~~~~~p~~lIdi~~i~eL~~I-~~~ 65 (324)
T 1rm6_B 6 DFRTHRPATLADAVNALA---AE--ATLPLGAGTDLLPNLRRGLGHPAALVDLTGIDGLATI-STL 65 (324)
T ss_dssp CCEEECCSSHHHHHHHTT---ST--TEEEESSCTTHHHHHHTTSCCCSEEEECTTSTTTTCE-EEC
T ss_pred ceEEEccCCHHHHHHHHh---CC--CCEEEECchhHHHHHhccCCCCCEEEECCCChhhcce-EEC
Confidence 345789999999888876 22 46778999998321 111234799999876 555 443
No 163
>1q7s_A BIT1, protein CGI-147; apoptosis; 2.00A {Homo sapiens} SCOP: c.131.1.1
Probab=22.87 E-value=1.1e+02 Score=21.70 Aligned_cols=37 Identities=24% Similarity=0.311 Sum_probs=31.9
Q ss_pred cCccceEEcCCCHHHHHHHHHHHHhCCCcE-EEecCCC
Q psy6765 180 SGKSKLVLKPKTTEEVSAILRYCNEQKIAV-CPQGGNT 216 (246)
Q Consensus 180 ~~~p~~vv~P~s~~~v~~~v~~a~~~~~~~-~~~ggG~ 216 (246)
.+.|..|++..++++...+.+-+.+.+++. .++-.|+
T Consensus 49 ~g~~KVvlk~~~e~~l~~l~~~a~~~gl~~~~i~DAG~ 86 (117)
T 1q7s_A 49 CGQPKVVVKAPDEETLIALLAHAKMLGLTVSLIQDAGR 86 (117)
T ss_dssp TTCCEEEEEESSHHHHHHHHHHHHHTTCCEEEEEECSS
T ss_pred CCCeeEEEEcCCHHHHHHHHHHHHHCCCCEEEEEECCC
Confidence 456899999999999999999999999985 5666665
No 164
>3dhx_A Methionine import ATP-binding protein METN; methionine uptake, regulation, amino-acid transport, ATP-BIN hydrolase, inner membrane, membrane; 2.10A {Escherichia coli} SCOP: d.58.18.13
Probab=22.65 E-value=1e+02 Score=21.21 Aligned_cols=28 Identities=18% Similarity=0.234 Sum_probs=23.7
Q ss_pred EEeCCCHHHHHHHHHHHHhCCCcEEEec
Q psy6765 69 VLKPKTTEEVSAILRYCNEQKIAVCPQG 96 (246)
Q Consensus 69 vv~P~s~~ev~~~v~~a~~~~i~v~~~G 96 (246)
+-.+.+.+++.++++|.+++++.+-+.|
T Consensus 69 v~l~G~~~~~~~ai~~L~~~~v~vEvl~ 96 (106)
T 3dhx_A 69 TEMHGTQQDTQAAIAWLQEHHVKVEVLG 96 (106)
T ss_dssp EEEESCHHHHHHHHHHHHHTTCEEEEEE
T ss_pred EEEeCCHHHHHHHHHHHHHCCCEEEEee
Confidence 4457789999999999999999887754
No 165
>3l84_A Transketolase; TKT, structural genomics, center for structur genomics of infectious diseases, csgid, transferase; HET: MSE; 1.36A {Campylobacter jejuni} PDB: 3m6l_A* 3m34_A* 3m7i_A*
Probab=22.40 E-value=79 Score=29.50 Aligned_cols=30 Identities=13% Similarity=0.021 Sum_probs=27.4
Q ss_pred cEEEeCCCHHHHHHHHHHHHhCCCcEEEec
Q psy6765 67 KLVLKPKTTEEVSAILRYCNEQKIAVCPQG 96 (246)
Q Consensus 67 ~~vv~P~s~~ev~~~v~~a~~~~i~v~~~G 96 (246)
..|+.|.+..|...++++|-+.+-|+.+|=
T Consensus 468 l~V~~P~d~~e~~~~l~~A~~~~~Pv~ir~ 497 (632)
T 3l84_A 468 FLTFRPADGVENVKAWQIALNADIPSAFVL 497 (632)
T ss_dssp CEEECCSSHHHHHHHHHHHHHCSSCEEEEC
T ss_pred CEEEecCCHHHHHHHHHHHHhCCCCEEEEE
Confidence 569999999999999999999999999874
No 166
>1sfl_A 3-dehydroquinate dehydratase; 3-dehydroquinase, enzyme turnover, shikimate pathway, lyase; 1.90A {Staphylococcus aureus subsp} SCOP: c.1.10.1 PDB: 1sfj_A*
Probab=22.35 E-value=1e+02 Score=24.72 Aligned_cols=35 Identities=17% Similarity=0.190 Sum_probs=27.8
Q ss_pred CccEEEeCCCHHHHHHHHHHHHh----CCCcEEEecCCC
Q psy6765 65 KSKLVLKPKTTEEVSAILRYCNE----QKIAVCPQGGNT 99 (246)
Q Consensus 65 ~p~~vv~P~s~~ev~~~v~~a~~----~~i~v~~~GgG~ 99 (246)
.++.++.|.+.+|+..++++.++ .+.|++..+-|.
T Consensus 158 ivKia~~a~~~~D~l~ll~~~~~~~~~~~~P~I~~~MG~ 196 (238)
T 1sfl_A 158 YVKLAVMPHNKNDVLNLLQAMSTFSDTMDCKVVGISMSK 196 (238)
T ss_dssp EEEEEECCSSHHHHHHHHHHHHHHHHHCSSEEEEEECTG
T ss_pred EEEEEecCCCHHHHHHHHHHHHHHhhcCCCCEEEEECCC
Confidence 56889999999999999988765 467877766544
No 167
>2csu_A 457AA long hypothetical protein; structural genomics, PH0766, riken ST genomics/proteomics initiative, RSGI, NPPSFA; 2.20A {Pyrococcus horikoshii} SCOP: c.2.1.8 c.23.4.1 c.23.4.1
Probab=22.18 E-value=2e+02 Score=25.45 Aligned_cols=83 Identities=16% Similarity=0.052 Sum_probs=53.8
Q ss_pred CeEEEcCCcc----HHHHHHHHhhc--CceeecCCCchhHHhhHHhhhhhh-ccccccCccceEEcCCCHHHHHHHHHHH
Q psy6765 130 GNVNSMSNAL----VTNRSLELSNT--GVVVLGVPLYDEVIVSASLMNKIL-NFDELSGKSKLVLKPKTTEEVSAILRYC 202 (246)
Q Consensus 130 ~~v~v~aG~~----~~~l~~~L~~~--gl~~~~~p~s~~~~~~~~~~~~~~-~~~~~~~~p~~vv~P~s~~~v~~~v~~a 202 (246)
..+.++++-. -..+.+.|.+. +..+|..|..... .+ ...| +-......++.++.....+.+.++++.|
T Consensus 10 siAVvGas~~~~~~g~~v~~~l~~~g~~~v~pVnP~~~~i--~G---~~~y~sl~~lp~~~Dlavi~vp~~~~~~~v~e~ 84 (457)
T 2csu_A 10 GIAVIGASNDPKKLGYEVFKNLKEYKKGKVYPVNIKEEEV--QG---VKAYKSVKDIPDEIDLAIIVVPKRFVKDTLIQC 84 (457)
T ss_dssp EEEEETCCSCTTSHHHHHHHHHTTCCSSEEEEECSSCSEE--TT---EECBSSTTSCSSCCSEEEECSCHHHHHHHHHHH
T ss_pred eEEEECcCCCCCchHHHHHHHHHHcCCCEEEEECCCCCeE--CC---EeccCCHHHcCCCCCEEEEecCHHHHHHHHHHH
Confidence 3466666643 34455666554 5788888875432 00 1122 2233445688988889999999999999
Q ss_pred HhCCCcE-EEecCCCC
Q psy6765 203 NEQKIAV-CPQGGNTG 217 (246)
Q Consensus 203 ~~~~~~~-~~~ggG~~ 217 (246)
.+.+++. +.+..|-.
T Consensus 85 ~~~Gi~~vv~~s~G~~ 100 (457)
T 2csu_A 85 GEKGVKGVVIITAGFG 100 (457)
T ss_dssp HHHTCCEEEECCCSST
T ss_pred HHcCCCEEEEecCCCC
Confidence 9999984 66666653
No 168
>3l9c_A 3-dehydroquinate dehydratase; AROD, amino-acid biosynthesis, aromatic amino acid biosynthe schiff base, lyase; 1.60A {Streptococcus mutans}
Probab=22.15 E-value=1.1e+02 Score=25.09 Aligned_cols=36 Identities=14% Similarity=0.249 Sum_probs=30.4
Q ss_pred CccceEEcCCCHHHHHHHHHHHHh-----CCCcEEEecCCC
Q psy6765 181 GKSKLVLKPKTTEEVSAILRYCNE-----QKIAVCPQGGNT 216 (246)
Q Consensus 181 ~~p~~vv~P~s~~~v~~~v~~a~~-----~~~~~~~~ggG~ 216 (246)
-.++.++.|.+.+|+..++++.++ .+.|++..+-|.
T Consensus 174 DIvKia~~a~s~~Dvl~Ll~~~~~~~~~~~~~PlIa~~MG~ 214 (259)
T 3l9c_A 174 RVVKIAVMPKNEQDVLDLMNYTRGFKTLNPNQEYVTMSMSK 214 (259)
T ss_dssp SEEEEEECCSSHHHHHHHHHHHHHHHHHCTTSEEEEEECTG
T ss_pred CEEEEEecCCCHHHHHHHHHHHHHHHhccCCCCEEEEECCC
Confidence 367899999999999999998764 468999888775
No 169
>1jlj_A Gephyrin; globular alpha/beta fold, structural protein; 1.60A {Homo sapiens} SCOP: c.57.1.1 PDB: 1ihc_A
Probab=21.90 E-value=1.4e+02 Score=23.04 Aligned_cols=36 Identities=19% Similarity=0.314 Sum_probs=30.4
Q ss_pred ceEEcCCCHHHHHHHHHHHHh-CCCcEEEecCCCCCC
Q psy6765 184 KLVLKPKTTEEVSAILRYCNE-QKIAVCPQGGNTGVV 219 (246)
Q Consensus 184 ~~vv~P~s~~~v~~~v~~a~~-~~~~~~~~ggG~~~~ 219 (246)
...+.|.+.+++.+.++.+.+ .+.-+++-.||+|.+
T Consensus 55 ~~~iv~Dd~~~I~~al~~a~~~~~~DlVIttGGtg~g 91 (189)
T 1jlj_A 55 AYKIVPDEIEEIKETLIDWCDEKELNLILTTGGTGFA 91 (189)
T ss_dssp EEEEECSCHHHHHHHHHHHHHTSCCSEEEEESCCSSS
T ss_pred EEEEeCCCHHHHHHHHHHHhhcCCCCEEEEcCCCCCC
Confidence 457789999999999998765 478999999999984
No 170
>2yr1_A 3-dehydroquinate dehydratase; amino acid biosynthesis, 3-dehydroquinase, structural genomi NPPSFA; 2.00A {Geobacillus kaustophilus}
Probab=21.81 E-value=88 Score=25.46 Aligned_cols=36 Identities=22% Similarity=0.322 Sum_probs=29.7
Q ss_pred CccceEEcCCCHHHHHHHHHHHHhC----CCcEEEecCCC
Q psy6765 181 GKSKLVLKPKTTEEVSAILRYCNEQ----KIAVCPQGGNT 216 (246)
Q Consensus 181 ~~p~~vv~P~s~~~v~~~v~~a~~~----~~~~~~~ggG~ 216 (246)
-.++.++.|.+.+|+..++++.++. +.|++..+-|.
T Consensus 171 DivKia~~a~s~~D~l~ll~~~~~~~~~~~~P~I~~~MG~ 210 (257)
T 2yr1_A 171 DIAKVAVMPKSPEDVLVLLQATEEARRELAIPLITMAMGG 210 (257)
T ss_dssp SEEEEEECCSSHHHHHHHHHHHHHHHHHCSSCEEEEECTT
T ss_pred CEEEEEeccCCHHHHHHHHHHHHHHhccCCCCEEEEECCC
Confidence 3678999999999999999876542 68999998763
No 171
>3can_A Pyruvate-formate lyase-activating enzyme; structural genomics, pyruvate-formate lyase-activating enzym MCSG, APC20359.1; 1.80A {Bacteroides vulgatus atcc 8482}
Probab=21.56 E-value=43 Score=25.15 Aligned_cols=24 Identities=13% Similarity=0.113 Sum_probs=20.2
Q ss_pred eCCCHHH--HHHHHHHHHhCCCcEEE
Q psy6765 71 KPKTTEE--VSAILRYCNEQKIAVCP 94 (246)
Q Consensus 71 ~P~s~~e--v~~~v~~a~~~~i~v~~ 94 (246)
.|.+.++ +.++.+.++++|+++++
T Consensus 155 ~~~~~e~~~l~~~~~~~~~~g~~~~i 180 (182)
T 3can_A 155 KMQTPSEEVQQQCIQILTDYGLKATI 180 (182)
T ss_dssp CCBCCCHHHHHHHHHHHHHTTCCEEE
T ss_pred CCCCHHHHHHHHHHHHHHHcCCceEe
Confidence 4555666 99999999999999987
No 172
>4e8j_A Lincosamide resistance protein; structural genomics, antibiotic resistance, center for struc genomics of infectious diseases (csgid); HET: MSE LN0; 1.82A {Staphylococcus haemolyticus} PDB: 4e8i_A* 4fo1_A*
Probab=21.54 E-value=46 Score=25.39 Aligned_cols=28 Identities=29% Similarity=0.316 Sum_probs=23.4
Q ss_pred CCHHHHHHHHHHHHhCCCcEEEecCCCCC
Q psy6765 73 KTTEEVSAILRYCNEQKIAVCPQGGNTGV 101 (246)
Q Consensus 73 ~s~~ev~~~v~~a~~~~i~v~~~GgG~~~ 101 (246)
-+.+|+.+++++++++++|+.+-| |+.+
T Consensus 6 ~~~~d~~evl~~l~~~~v~~~i~G-GwAv 33 (161)
T 4e8j_A 6 VTEKELFYILDLFEHMKVTYWLDG-GWGV 33 (161)
T ss_dssp CCHHHHHHHHHHHHHHTCCEEEEH-HHHH
T ss_pred cCHHHHHHHHHHHHhCCCcEEEEc-Hhhh
Confidence 478899999999999999999886 4443
No 173
>1y5e_A Molybdenum cofactor biosynthesis protein B; structural genomics, protein structure initiative, PSI, MCSG, midwest center for structural genomics; 1.90A {Bacillus cereus} SCOP: c.57.1.1
Probab=21.47 E-value=1.5e+02 Score=22.22 Aligned_cols=35 Identities=14% Similarity=0.245 Sum_probs=29.3
Q ss_pred cEEEeCCCHHHHHHHHHHHHh-CCCcEEEecCCCCC
Q psy6765 67 KLVLKPKTTEEVSAILRYCNE-QKIAVCPQGGNTGV 101 (246)
Q Consensus 67 ~~vv~P~s~~ev~~~v~~a~~-~~i~v~~~GgG~~~ 101 (246)
...+.|.+.+++.+.++.+.+ .+.-+++-.||+|.
T Consensus 49 ~~~iv~Dd~~~i~~~l~~~~~~~~~DlVittGG~g~ 84 (169)
T 1y5e_A 49 SYEIVKDDKESIQQAVLAGYHKEDVDVVLTNGGTGI 84 (169)
T ss_dssp EEEEECSSHHHHHHHHHHHHTCTTCSEEEEECCCSS
T ss_pred EEEEeCCCHHHHHHHHHHHHhcCCCCEEEEcCCCCC
Confidence 456779999999999998876 35678999999998
No 174
>2ohw_A YUEI protein; structural genomics, PSI-2, protein structure initiative, NEW YORK SGX research center for structural genomics, nysgxrc; 1.40A {Bacillus subtilis} SCOP: d.79.8.1
Probab=21.43 E-value=1.4e+02 Score=21.73 Aligned_cols=24 Identities=4% Similarity=0.026 Sum_probs=21.2
Q ss_pred CHHHHHHHHHHHHhCCCcEEEecC
Q psy6765 191 TTEEVSAILRYCNEQKIAVCPQGG 214 (246)
Q Consensus 191 s~~~v~~~v~~a~~~~~~~~~~gg 214 (246)
+-+.....+++|++++++|.+...
T Consensus 74 ~~~~~~~YiklA~~~~i~fTiV~~ 97 (133)
T 2ohw_A 74 QYQSYSSYIQMASRYGVPFKIVSD 97 (133)
T ss_dssp CHHHHHHHHHHHHHTTCCEEEECC
T ss_pred CHHHHHHHHHHHHHcCCCeEEecC
Confidence 456788899999999999999987
No 175
>4gqr_A Pancreatic alpha-amylase; glycosyl hydrolase, diabetes, obesity, digestion, glycosidas inhibition, flavonol, drug design; HET: NAG MYC; 1.20A {Homo sapiens} PDB: 1cpu_A* 1bsi_A 1u2y_A* 1u30_A* 1u33_A* 1xcw_A* 1xcx_A* 1xd0_A* 1xd1_A* 2qmk_A* 2qv4_A* 3bai_A* 3baj_A* 3baw_A* 3ij7_A* 1hny_A* 3ij9_A* 3ij8_A* 4gqq_A* 1kgw_A* ...
Probab=21.38 E-value=63 Score=28.18 Aligned_cols=22 Identities=14% Similarity=0.371 Sum_probs=20.7
Q ss_pred CCHHHHHHHHHHHHhCCCcEEE
Q psy6765 73 KTTEEVSAILRYCNEQKIAVCP 94 (246)
Q Consensus 73 ~s~~ev~~~v~~a~~~~i~v~~ 94 (246)
.|.+|+.++|+.|+++||.|++
T Consensus 74 Gt~~df~~lv~~aH~~Gi~Vil 95 (496)
T 4gqr_A 74 GNEDEFRNMVTRCNNVGVRIYV 95 (496)
T ss_dssp BCHHHHHHHHHHHHHTTCEEEE
T ss_pred CCHHHHHHHHHHHHHCCCEEEE
Confidence 5899999999999999999987
No 176
>3bzy_B ESCU; auto cleavage protein, flagella, intein, T3SS, membrane, membrane protein, protein transport; 1.20A {Escherichia coli} SCOP: d.367.1.1 PDB: 3c00_B 3bzl_C 3bzo_B 3bzv_B 3c03_C 3bzz_B 3bzx_B
Probab=20.91 E-value=60 Score=21.72 Aligned_cols=30 Identities=13% Similarity=0.118 Sum_probs=21.0
Q ss_pred CCccEEEeCCCHHHHHHHHHHHHhCCCcEEE
Q psy6765 64 GKSKLVLKPKTTEEVSAILRYCNEQKIAVCP 94 (246)
Q Consensus 64 ~~p~~vv~P~s~~ev~~~v~~a~~~~i~v~~ 94 (246)
..|.++.+=. -+-..++++.|+++|+|+.-
T Consensus 16 ~aP~VvAKG~-~~~A~~I~~~A~e~~VPi~e 45 (83)
T 3bzy_B 16 PLPLVIETGK-DAKALQIIKLAELYDIPVIE 45 (83)
T ss_dssp SSCEEEEEEE-THHHHHHHHHHHHTTCCEEE
T ss_pred CCCEEEEEeC-cHHHHHHHHHHHHcCCCEEe
Confidence 4565555543 34567889999999999863
No 177
>2bfd_B 2-oxoisovalerate dehydrogenase beta subunit; oxidoreductase, multi-enzyme complex, acylation, oxidative decarboxylation, maple syrup urine disease; HET: TDP; 1.39A {Homo sapiens} SCOP: c.36.1.7 c.48.1.2 PDB: 1dtw_B* 1olu_B* 1ols_B* 1v11_B* 1v16_B* 1v1m_B* 1u5b_B* 1wci_B* 1v1r_B* 1x7x_B* 1x7w_B* 1x7z_B* 1x80_B* 2beu_B* 2bev_B* 2bew_B* 2bfb_B* 2bfc_B* 1x7y_B* 2bfe_B* ...
Probab=20.90 E-value=98 Score=26.23 Aligned_cols=30 Identities=20% Similarity=0.208 Sum_probs=27.0
Q ss_pred cc-ceEEcCCCHHHHHHHHHHHHhCCCcEEE
Q psy6765 182 KS-KLVLKPKTTEEVSAILRYCNEQKIAVCP 211 (246)
Q Consensus 182 ~p-~~vv~P~s~~~v~~~v~~a~~~~~~~~~ 211 (246)
.| ..|+.|.+.+|...+++.|-+++-|++.
T Consensus 157 iP~l~V~~Psd~~e~~~~l~~a~~~~~Pv~i 187 (342)
T 2bfd_B 157 CPGIKVVIPRSPFQAKGLLLSCIEDKNPCIF 187 (342)
T ss_dssp STTCEEECCSSHHHHHHHHHHHHHSSSCEEE
T ss_pred CCCcEEEeeCCHHHHHHHHHHHHhcCCcEEE
Confidence 45 4799999999999999999988899988
No 178
>1umd_B E1-beta, 2-OXO acid dehydrogenase beta subunit; alpha(2)beta(2) tetramer, structural genomics; HET: TDP; 1.90A {Thermus thermophilus} SCOP: c.36.1.7 c.48.1.2 PDB: 1um9_B* 1umc_B* 1umb_B*
Probab=20.83 E-value=93 Score=26.06 Aligned_cols=29 Identities=14% Similarity=0.051 Sum_probs=26.4
Q ss_pred ceEEcCCCHHHHHHHHHHHHhCCCcEEEe
Q psy6765 184 KLVLKPKTTEEVSAILRYCNEQKIAVCPQ 212 (246)
Q Consensus 184 ~~vv~P~s~~~v~~~v~~a~~~~~~~~~~ 212 (246)
..|+.|.+.+|...+++.+-+++-|++.+
T Consensus 143 ~~V~~P~d~~e~~~~l~~a~~~~~Pv~i~ 171 (324)
T 1umd_B 143 LKVVAVSTPYDAKGLLKAAIRDEDPVVFL 171 (324)
T ss_dssp CEEEECCSHHHHHHHHHHHHHCSSCEEEE
T ss_pred CEEEEeCCHHHHHHHHHHHHhcCCCEEEE
Confidence 47999999999999999999999999884
No 179
>2o1s_A 1-deoxy-D-xylulose-5-phosphate synthase; DXS, thiamine, isoprenoid, transferase; HET: TDP; 2.40A {Escherichia coli}
Probab=20.77 E-value=89 Score=28.91 Aligned_cols=79 Identities=8% Similarity=-0.038 Sum_probs=47.8
Q ss_pred CCCc-cEEEeCCCHHHHHHHHHHHHhC-CCcEEEecCCCCCCCCcccCCCeEEEecCCCCCceeeeCCCCeEEEcCCccH
Q psy6765 63 EGKS-KLVLKPKTTEEVSAILRYCNEQ-KIAVCPQGGNTGVVAGGVPLYDEVIVSASLMNKILNFDELSGNVNSMSNALV 140 (246)
Q Consensus 63 ~~~p-~~vv~P~s~~ev~~~v~~a~~~-~i~v~~~GgG~~~~g~~~~~~~gvvidl~~m~~i~~id~~~~~v~v~aG~~~ 140 (246)
...| ..|+.|.+.+|...+++.|-+. +-|+.+|-....+...-.+.... + .+.+-..+.++...+.+..|...
T Consensus 441 ~~iP~l~v~~P~d~~e~~~~l~~a~~~~~~Pv~i~~~r~~~~~~~~~~~~~--~---~~G~~~~~~~g~dv~iva~G~~~ 515 (621)
T 2o1s_A 441 RCIPEMVIMTPSDENECRQMLYTGYHYNDGPSAVRYPRGNAVGVELTPLEK--L---PIGKGIVKRRGEKLAILNFGTLM 515 (621)
T ss_dssp TTSTTCEEECCSSHHHHHHHHHHHHHCCSSCEEEECCSSBCCCCCCCCCCC--C---CTTCCEEEECCSSEEEEEESTTH
T ss_pred hcCCCCEEEecCCHHHHHHHHHHHHHcCCCCEEEEeCCCCCCCCCCCcccc--c---cCCceEEeecCCCEEEEEecHHH
Confidence 4455 5689999999999999999998 88999986544431111111000 1 11221122234455667777777
Q ss_pred HHHHHH
Q psy6765 141 TNRSLE 146 (246)
Q Consensus 141 ~~l~~~ 146 (246)
....++
T Consensus 516 ~~a~~A 521 (621)
T 2o1s_A 516 PEAAKV 521 (621)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 666655
No 180
>3v7e_A Ribosome-associated protein L7AE-like; RNA-protein complex, K-turn, L7AE-like, A member L7AE/L30E superfamily; HET: SAM; 2.80A {Bacillus subtilis}
Probab=20.41 E-value=71 Score=21.00 Aligned_cols=35 Identities=23% Similarity=0.255 Sum_probs=26.8
Q ss_pred CCCccEEEeCCCH--HHHHHHHHHHHhCCCcEEEecC
Q psy6765 63 EGKSKLVLKPKTT--EEVSAILRYCNEQKIAVCPQGG 97 (246)
Q Consensus 63 ~~~p~~vv~P~s~--~ev~~~v~~a~~~~i~v~~~Gg 97 (246)
.+.+..|+...+. +=+..+..+|.++++|+....+
T Consensus 25 ~gkaklViiA~D~~~~~~~~i~~lc~~~~Ip~~~v~s 61 (82)
T 3v7e_A 25 RGSVKEVVVAKDADPILTSSVVSLAEDQGISVSMVES 61 (82)
T ss_dssp TTCEEEEEEETTSCHHHHHHHHHHHHHHTCCEEEESC
T ss_pred cCCeeEEEEeCCCCHHHHHHHHHHHHHcCCCEEEECC
Confidence 4677888877765 4466778889999999998763
No 181
>1ik6_A Pyruvate dehydrogenase; E1BETA, tetramer, GXXXG, oxidoreductase; 2.00A {Pyrobaculum aerophilum} SCOP: c.36.1.7 c.48.1.2
Probab=20.17 E-value=1e+02 Score=26.45 Aligned_cols=29 Identities=17% Similarity=0.141 Sum_probs=26.0
Q ss_pred ceEEcCCCHHHHHHHHHHHHhCCCcEEEe
Q psy6765 184 KLVLKPKTTEEVSAILRYCNEQKIAVCPQ 212 (246)
Q Consensus 184 ~~vv~P~s~~~v~~~v~~a~~~~~~~~~~ 212 (246)
..|+.|.+.+|...+++.|-+++-|++.+
T Consensus 190 l~V~~Psd~~e~~~ll~~A~~~~~Pv~i~ 218 (369)
T 1ik6_A 190 LVVVMPSTPYNAKGLLKAAIRGDDPVVFL 218 (369)
T ss_dssp CEEECCCSHHHHHHHHHHHHHSSSCEEEE
T ss_pred cEEEecCCHHHHHHHHHHHHhCCCCEEEE
Confidence 45999999999999999998888898884
Done!