Your job contains 1 sequence.
>psy6770
YLLCTSFDTELVTAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENSPAIIFIDEIDAIAT
KRFDAQTGADREVQRILLELLNQMDGFDQTTNVKVIMATNRADTLDPALLRPGRLDRKIE
FPLPDRRQKRLVFSTITAKMNLSDEVDLEDYVARPDRISGADINAICQEVIMATNRADTL
DPALLRPGRLDRKIEFPLPDRRQKRLVFSTITAKMNFMLNIGNLQVIMATNRADTLDPAL
LRPGRLDRKIEFPLPDRRQKRLVFSTITAKMNLSDEVDLEDYVARPDRISGADINAICQE
AGMHAVRENRYIVLPKDFEKGYKKCAGMHAVRENRYIVLPKDFEKGYKNNTKKDESEHEF
YK
The BLAST search returned 4 gene products which did not match your query constraints. Please see the full BLAST report below for the details.
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= psy6770
(362 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
FB|FBgn0028686 - symbol:Rpt3 "Regulatory particle triple-... 692 1.5e-85 2
UNIPROTKB|F1MG70 - symbol:PSMC4 "26S protease regulatory ... 691 9.4e-82 2
UNIPROTKB|Q3T030 - symbol:PSMC4 "26S protease regulatory ... 691 9.4e-82 2
UNIPROTKB|E2RH48 - symbol:PSMC4 "Uncharacterized protein"... 691 9.4e-82 2
UNIPROTKB|P43686 - symbol:PSMC4 "26S protease regulatory ... 691 9.4e-82 2
UNIPROTKB|Q4R7L3 - symbol:PSMC4 "26S protease regulatory ... 691 9.4e-82 2
MGI|MGI:1346093 - symbol:Psmc4 "proteasome (prosome, macr... 691 9.4e-82 2
RGD|621102 - symbol:Psmc4 "proteasome (prosome, macropain... 691 9.4e-82 2
ZFIN|ZDB-GENE-030131-5083 - symbol:psmc4 "proteasome (pro... 686 1.5e-81 2
WB|WBGene00004503 - symbol:rpt-3 species:6239 "Caenorhabd... 683 9.5e-80 2
TAIR|locus:2161258 - symbol:RPT3 "regulatory particle tri... 664 1.5e-79 2
FB|FBgn0037742 - symbol:Rpt3R "Regulatory particle triple... 662 2.0e-79 2
DICTYBASE|DDB_G0289003 - symbol:psmC4 "HIV TAT binding-pr... 656 3.2e-77 2
GENEDB_PFALCIPARUM|PFD0665c - symbol:PFD0665c "26s protea... 618 4.7e-70 2
UNIPROTKB|Q8I1V1 - symbol:PFD0665c "26S proteasome AAA-AT... 618 4.7e-70 2
UNIPROTKB|F1LZ09 - symbol:F1LZ09 "Uncharacterized protein... 602 7.7e-64 2
CGD|CAL0001552 - symbol:PR26 species:5476 "Candida albica... 576 5.4e-63 2
UNIPROTKB|Q5A0L8 - symbol:PR26 "Likely 26S proteasome reg... 576 5.4e-63 2
ASPGD|ASPL0000036562 - symbol:AN2904 species:162425 "Emer... 580 2.9e-62 2
SGD|S000002802 - symbol:RPT3 "ATPase of the 19S regulator... 562 3.7e-62 2
POMBASE|SPCC576.10c - symbol:rpt3 "19S proteasome regulat... 583 6.1e-62 2
WB|WBGene00004502 - symbol:rpt-2 species:6239 "Caenorhabd... 493 1.6e-51 2
DICTYBASE|DDB_G0270784 - symbol:psmC1 "TAT binding protei... 511 2.0e-51 2
UNIPROTKB|A4FUZ3 - symbol:PSMC1 "Proteasome (Prosome, mac... 491 6.8e-51 2
UNIPROTKB|F1PQ40 - symbol:PSMC1 "Uncharacterized protein"... 491 6.8e-51 2
UNIPROTKB|B4DR63 - symbol:PSMC1 "cDNA FLJ58247, highly si... 491 6.8e-51 2
UNIPROTKB|P62191 - symbol:PSMC1 "26S protease regulatory ... 491 6.8e-51 2
UNIPROTKB|F2Z5J1 - symbol:PSMC1 "Uncharacterized protein"... 491 6.8e-51 2
MGI|MGI:106054 - symbol:Psmc1 "protease (prosome, macropa... 491 6.8e-51 2
RGD|621097 - symbol:Psmc1 "proteasome (prosome, macropain... 491 6.8e-51 2
ZFIN|ZDB-GENE-030131-8730 - symbol:psmc1a "proteasome (pr... 491 6.8e-51 2
ZFIN|ZDB-GENE-040625-69 - symbol:psmc1b "proteasome (pros... 488 1.4e-50 2
UNIPROTKB|F1NSP7 - symbol:PSMC1 "26S protease regulatory ... 487 1.8e-50 2
UNIPROTKB|F1NTZ4 - symbol:PSMC1 "26S protease regulatory ... 487 1.8e-50 2
UNIPROTKB|Q90732 - symbol:PSMC1 "26S protease regulatory ... 486 2.9e-50 2
FB|FBgn0015282 - symbol:Rpt2 "Regulatory particle triple-... 487 1.3e-49 2
TAIR|locus:2119926 - symbol:RPT2a "regulatory particle AA... 484 4.2e-49 2
TAIR|locus:2061639 - symbol:RPT2b "regulatory particle AA... 481 1.1e-48 2
ASPGD|ASPL0000049719 - symbol:AN2213 species:162425 "Emer... 471 2.6e-47 2
GENEDB_PFALCIPARUM|PF10_0081 - symbol:PF10_0081 "26S prot... 485 3.0e-46 1
UNIPROTKB|Q8IJW0 - symbol:PF10_0081 "26S proteasome regul... 485 3.0e-46 1
SGD|S000002165 - symbol:RPT2 "ATPase of the 19S regulator... 453 4.7e-46 2
POMBASE|SPBC4.07c - symbol:rpt2 "19S proteasome regulator... 450 9.7e-46 2
CGD|CAL0005257 - symbol:RPT2 species:5476 "Candida albica... 437 2.9e-44 2
UNIPROTKB|Q58576 - symbol:pan "Proteasome-activating nucl... 411 5.9e-42 2
WB|WBGene00015688 - symbol:C10G11.8 species:6239 "Caenorh... 411 7.5e-42 2
WB|WBGene00004506 - symbol:rpt-6 species:6239 "Caenorhabd... 396 5.2e-41 2
UNIPROTKB|J9NWB0 - symbol:J9NWB0 "Uncharacterized protein... 395 6.6e-41 2
FB|FBgn0020369 - symbol:Rpt6 "Regulatory particle triple-... 388 8.4e-41 2
POMBASE|SPBC23G7.12c - symbol:rpt6 "19S proteasome regula... 391 2.2e-40 2
DICTYBASE|DDB_G0276917 - symbol:psmC2 "26S proteasome ATP... 395 3.6e-40 2
WB|WBGene00018991 - symbol:F56F11.4 species:6239 "Caenorh... 388 3.6e-40 2
TAIR|locus:2024822 - symbol:RPT1A "regulatory particle tr... 394 4.6e-40 2
CGD|CAL0006022 - symbol:RPT6 species:5476 "Candida albica... 385 5.8e-40 2
SGD|S000003016 - symbol:RPT6 "ATPase of the 19S regulator... 386 7.4e-40 2
UNIPROTKB|F1NU79 - symbol:PSMC5 "Uncharacterized protein"... 379 7.4e-40 2
UNIPROTKB|P62194 - symbol:PSMC5 "26S protease regulatory ... 379 7.4e-40 2
UNIPROTKB|P62195 - symbol:PSMC5 "26S protease regulatory ... 379 7.4e-40 2
UNIPROTKB|P62197 - symbol:PSMC5 "26S protease regulatory ... 379 7.4e-40 2
UNIPROTKB|Q4RG45 - symbol:GSTENG00035021001 "Chromosome 2... 379 7.4e-40 2
UNIPROTKB|Q6AZU7 - symbol:Q6AZU7 "Putative uncharacterize... 379 7.4e-40 2
UNIPROTKB|Q6P380 - symbol:psmc5 "Putative uncharacterized... 379 7.4e-40 2
MGI|MGI:105047 - symbol:Psmc5 "protease (prosome, macropa... 379 7.4e-40 2
RGD|708376 - symbol:Psmc5 "proteasome (prosome, macropain... 379 7.4e-40 2
ZFIN|ZDB-GENE-030131-6547 - symbol:psmc5 "proteasome (pro... 379 7.4e-40 2
DICTYBASE|DDB_G0292382 - symbol:psmC5 "HIV TAT binding-pr... 376 7.4e-40 2
FB|FBgn0039788 - symbol:Rpt6R "Regulatory particle triple... 376 1.5e-39 2
ASPGD|ASPL0000064945 - symbol:AN6988 species:162425 "Emer... 382 1.9e-39 2
TAIR|locus:2147670 - symbol:RPT6A "regulatory particle tr... 376 1.9e-39 2
TAIR|locus:2147685 - symbol:AT5G20000 species:3702 "Arabi... 376 1.9e-39 2
FB|FBgn0028685 - symbol:Rpt4 "Regulatory particle triple-... 383 3.2e-39 2
GENEDB_PFALCIPARUM|PFL2345c - symbol:PFL2345c "tat-bindin... 377 4.0e-39 2
UNIPROTKB|Q8I4U5 - symbol:PFL2345c "Tat-binding protein h... 377 4.0e-39 2
DICTYBASE|DDB_G0284415 - symbol:psmC3 "26S proteasome ATP... 393 5.1e-39 2
WB|WBGene00004504 - symbol:rpt-4 species:6239 "Caenorhabd... 381 5.1e-39 2
UNIPROTKB|O17071 - symbol:rpt-4 "Probable 26S protease re... 381 5.1e-39 2
UNIPROTKB|Q9FXT8 - symbol:OsRPT4 "Os02g0199900 protein" s... 376 5.1e-39 2
UNIPROTKB|P46470 - symbol:psmc5 "26S protease regulatory ... 370 6.5e-39 2
FB|FBgn0028687 - symbol:Rpt1 "Regulatory particle triple-... 382 8.3e-39 2
TAIR|locus:2028200 - symbol:AT1G45000 species:3702 "Arabi... 376 1.1e-38 2
FB|FBgn0036224 - symbol:Rpt4R "Regulatory particle triple... 379 1.3e-38 2
TAIR|locus:2036099 - symbol:RPT5B "26S proteasome AAA-ATP... 388 1.7e-38 2
TAIR|locus:2079742 - symbol:RPT5A "regulatory particle tr... 388 1.7e-38 2
TAIR|locus:2159996 - symbol:RPT4A "regulatory particle tr... 374 1.7e-38 2
GENEDB_PFALCIPARUM|PF11_0314 - symbol:PF11_0314 "26S prot... 390 2.2e-38 2
UNIPROTKB|Q8II60 - symbol:PF11_0314 "26S protease subunit... 390 2.2e-38 2
UNIPROTKB|E1C4V5 - symbol:PSMC2 "Uncharacterized protein"... 380 2.2e-38 2
UNIPROTKB|F1NFL8 - symbol:PSMC2 "Uncharacterized protein"... 380 2.2e-38 2
UNIPROTKB|Q5E9F9 - symbol:PSMC2 "26S protease regulatory ... 380 2.2e-38 2
UNIPROTKB|F1PPH7 - symbol:PSMC2 "Uncharacterized protein"... 380 2.2e-38 2
UNIPROTKB|B7Z5E2 - symbol:PSMC2 "cDNA FLJ52353, highly si... 380 2.2e-38 2
UNIPROTKB|P35998 - symbol:PSMC2 "26S protease regulatory ... 380 2.2e-38 2
UNIPROTKB|F1SB53 - symbol:PSMC2 "Uncharacterized protein"... 380 2.2e-38 2
UNIPROTKB|I3LJ30 - symbol:I3LJ30 "Uncharacterized protein... 380 2.2e-38 2
UNIPROTKB|Q4R4R0 - symbol:PSMC2 "26S protease regulatory ... 380 2.2e-38 2
MGI|MGI:109555 - symbol:Psmc2 "proteasome (prosome, macro... 380 2.2e-38 2
ZFIN|ZDB-GENE-040426-1327 - symbol:psmc2 "proteasome (pro... 380 2.2e-38 2
UNIPROTKB|P46472 - symbol:psmc2 "26S protease regulatory ... 380 2.8e-38 2
UNIPROTKB|F1NCS8 - symbol:PSMC6 "Uncharacterized protein"... 373 2.8e-38 2
UNIPROTKB|Q5ZKX2 - symbol:PSMC6 "Uncharacterized protein"... 373 2.8e-38 2
WARNING: Descriptions of 521 database sequences were not reported due to the
limiting value of parameter V = 100.
>FB|FBgn0028686 [details] [associations]
symbol:Rpt3 "Regulatory particle triple-A ATPase 3"
species:7227 "Drosophila melanogaster" [GO:0008540 "proteasome
regulatory particle, base subcomplex" evidence=ISS;NAS] [GO:0004175
"endopeptidase activity" evidence=IDA] [GO:0006508 "proteolysis"
evidence=ISS;IDA] [GO:0005838 "proteasome regulatory particle"
evidence=ISS;IDA] [GO:0001673 "male germ cell nucleus"
evidence=IDA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0006974 "response to DNA damage stimulus"
evidence=IMP] InterPro:IPR001270 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PRINTS:PR00300 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0005737 EMBL:AE014298 GO:GO:0006508
GO:GO:0006974 GO:GO:0016887 GO:GO:0004175 GO:GO:0001673
GO:GO:0030163 HSSP:Q01853 eggNOG:COG1222 TIGRFAMs:TIGR01242
GO:GO:0008540 BRENDA:3.4.25.1 KO:K03063 OMA:DQTTNVK
GeneTree:ENSGT00550000074962 EMBL:AF145306 EMBL:BT046144
EMBL:FN544098 EMBL:FN544099 EMBL:FN544100 EMBL:FN544101
EMBL:FN544102 EMBL:FN544103 EMBL:FN544104 EMBL:FN544105
EMBL:FN544106 EMBL:FN544108 RefSeq:NP_572686.1 UniGene:Dm.8238
SMR:Q9V405 STRING:Q9V405 EnsemblMetazoa:FBtr0073436 GeneID:32047
KEGG:dme:Dmel_CG16916 UCSC:CG16916-RA CTD:32047 FlyBase:FBgn0028686
InParanoid:Q9V405 OrthoDB:EOG4P5HRH GenomeRNAi:32047 NextBio:776548
Uniprot:Q9V405
Length = 413
Score = 692 (248.7 bits), Expect = 1.5e-85, Sum P(2) = 1.5e-85
Identities = 137/159 (86%), Positives = 145/159 (91%)
Query: 14 AFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENSPXXXXXXXXXXXXTKRFDAQTGADREV 73
+FIRVVGSEFVQKYLGEGPRMVRDVFRLAKEN+P TKRFDAQTGADREV
Sbjct: 221 SFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENAPAIIFIDEIDAIATKRFDAQTGADREV 280
Query: 74 QRILLELLNQMDGFDQTTNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLVF 133
QRILLELLNQMDGFDQTTNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLVF
Sbjct: 281 QRILLELLNQMDGFDQTTNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLVF 340
Query: 134 STITAKMNLSDEVDLEDYVARPDRISGADINAICQEVIM 172
STIT+KMNLS++VDLE++VARPD+ISGADINAICQE M
Sbjct: 341 STITSKMNLSEDVDLEEFVARPDKISGADINAICQEAGM 379
Score = 488 (176.8 bits), Expect = 1.4e-46, P = 1.4e-46
Identities = 96/124 (77%), Positives = 110/124 (88%)
Query: 200 DRRQKRLVFSTITAKMNFMLNIGNLQVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQ 259
DR +R++ + +M+ N++VIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQ
Sbjct: 277 DREVQRILLELLN-QMDGFDQTTNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQ 335
Query: 260 KRLVFSTITAKMNLSDEVDLEDYVARPDRISGADINAICQEAGMHAVRENRYIVLPKDFE 319
KRLVFSTIT+KMNLS++VDLE++VARPD+ISGADINAICQEAGMHAVRENRYIVL KDFE
Sbjct: 336 KRLVFSTITSKMNLSEDVDLEEFVARPDKISGADINAICQEAGMHAVRENRYIVLAKDFE 395
Query: 320 KGYK 323
KGYK
Sbjct: 396 KGYK 399
Score = 237 (88.5 bits), Expect = 6.3e-34, Sum P(2) = 6.3e-34
Identities = 51/71 (71%), Positives = 59/71 (83%)
Query: 169 EVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLVFSTITAKMNFMLNIGNLQVIM 228
+VIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLVFSTIT+KMN ++ +L+ +
Sbjct: 301 KVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLVFSTITSKMNLSEDV-DLEEFV 359
Query: 229 ATNRADTLDPA 239
A R D + A
Sbjct: 360 A--RPDKISGA 368
Score = 183 (69.5 bits), Expect = 1.5e-85, Sum P(2) = 1.5e-85
Identities = 34/37 (91%), Positives = 34/37 (91%)
Query: 326 AGMHAVRENRYIVLPKDFEKGYKNNTKKDESEHEFYK 362
AGMHAVRENRYIVL KDFEKGYKNN KKDE EHEFYK
Sbjct: 377 AGMHAVRENRYIVLAKDFEKGYKNNIKKDEQEHEFYK 413
>UNIPROTKB|F1MG70 [details] [associations]
symbol:PSMC4 "26S protease regulatory subunit 6B"
species:9913 "Bos taurus" [GO:0022624 "proteasome accessory
complex" evidence=IEA] [GO:0005739 "mitochondrion" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0001824 "blastocyst
development" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0030163 "protein catabolic process" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005739 GO:GO:0005524 GO:GO:0005634 GO:GO:0030163
GO:GO:0017111 GO:GO:0001824 TIGRFAMs:TIGR01242 OMA:DQTTNVK
IPI:IPI00718026 GeneTree:ENSGT00550000074962 EMBL:DAAA02047067
Ensembl:ENSBTAT00000012391 ArrayExpress:F1MG70 Uniprot:F1MG70
Length = 417
Score = 691 (248.3 bits), Expect = 9.4e-82, Sum P(2) = 9.4e-82
Identities = 136/156 (87%), Positives = 142/156 (91%)
Query: 14 AFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENSPXXXXXXXXXXXXTKRFDAQTGADREV 73
AFIRVVGSEFVQKYLGEGPRMVRDVFRLAKEN+P TKRFDAQTGADREV
Sbjct: 225 AFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENAPAIIFIDEIDAIATKRFDAQTGADREV 284
Query: 74 QRILLELLNQMDGFDQTTNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLVF 133
QRILLELLNQMDGFDQ NVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRL+F
Sbjct: 285 QRILLELLNQMDGFDQNVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLIF 344
Query: 134 STITAKMNLSDEVDLEDYVARPDRISGADINAICQE 169
STIT+KMNLS+EVDLEDYVARPD+ISGADIN+ICQE
Sbjct: 345 STITSKMNLSEEVDLEDYVARPDKISGADINSICQE 380
Score = 483 (175.1 bits), Expect = 4.8e-46, P = 4.8e-46
Identities = 95/124 (76%), Positives = 108/124 (87%)
Query: 200 DRRQKRLVFSTITAKMNFMLNIGNLQVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQ 259
DR +R++ + F N+ N++VIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQ
Sbjct: 281 DREVQRILLELLNQMDGFDQNV-NVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQ 339
Query: 260 KRLVFSTITAKMNLSDEVDLEDYVARPDRISGADINAICQEAGMHAVRENRYIVLPKDFE 319
KRL+FSTIT+KMNLS+EVDLEDYVARPD+ISGADIN+ICQE+GM AVRENRYIVL KDFE
Sbjct: 340 KRLIFSTITSKMNLSEEVDLEDYVARPDKISGADINSICQESGMLAVRENRYIVLAKDFE 399
Query: 320 KGYK 323
K YK
Sbjct: 400 KAYK 403
Score = 238 (88.8 bits), Expect = 2.3e-30, Sum P(2) = 2.3e-30
Identities = 48/61 (78%), Positives = 55/61 (90%)
Query: 156 DRISGADINAICQEVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLVFSTITAKM 215
+++ G D N + +VIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRL+FSTIT+KM
Sbjct: 293 NQMDGFDQN-VNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLIFSTITSKM 351
Query: 216 N 216
N
Sbjct: 352 N 352
Score = 148 (57.2 bits), Expect = 9.4e-82, Sum P(2) = 9.4e-82
Identities = 29/37 (78%), Positives = 30/37 (81%)
Query: 326 AGMHAVRENRYIVLPKDFEKGYKNNTKKDESEHEFYK 362
+GM AVRENRYIVL KDFEK YK KKDE EHEFYK
Sbjct: 381 SGMLAVRENRYIVLAKDFEKAYKTVIKKDEQEHEFYK 417
>UNIPROTKB|Q3T030 [details] [associations]
symbol:PSMC4 "26S protease regulatory subunit 6B"
species:9913 "Bos taurus" [GO:0022624 "proteasome accessory
complex" evidence=ISS] [GO:0005634 "nucleus" evidence=IEA]
[GO:0005739 "mitochondrion" evidence=IEA] [GO:0001824 "blastocyst
development" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0030163 "protein catabolic process" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005739 GO:GO:0005524 GO:GO:0005634 GO:GO:0030163
GO:GO:0017111 HSSP:Q9WZ49 GO:GO:0001824 eggNOG:COG1222
TIGRFAMs:TIGR01242 HOVERGEN:HBG000109 GO:GO:0022624
HOGENOM:HOG000225143 KO:K03063 EMBL:BC102595 IPI:IPI00718026
RefSeq:NP_001030255.1 UniGene:Bt.48909 ProteinModelPortal:Q3T030
SMR:Q3T030 STRING:Q3T030 PRIDE:Q3T030 GeneID:510029 KEGG:bta:510029
CTD:5704 InParanoid:Q3T030 OrthoDB:EOG4KD6M4 NextBio:20869245
ArrayExpress:Q3T030 Uniprot:Q3T030
Length = 418
Score = 691 (248.3 bits), Expect = 9.4e-82, Sum P(2) = 9.4e-82
Identities = 136/156 (87%), Positives = 142/156 (91%)
Query: 14 AFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENSPXXXXXXXXXXXXTKRFDAQTGADREV 73
AFIRVVGSEFVQKYLGEGPRMVRDVFRLAKEN+P TKRFDAQTGADREV
Sbjct: 226 AFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENAPAIIFIDEIDAIATKRFDAQTGADREV 285
Query: 74 QRILLELLNQMDGFDQTTNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLVF 133
QRILLELLNQMDGFDQ NVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRL+F
Sbjct: 286 QRILLELLNQMDGFDQNVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLIF 345
Query: 134 STITAKMNLSDEVDLEDYVARPDRISGADINAICQE 169
STIT+KMNLS+EVDLEDYVARPD+ISGADIN+ICQE
Sbjct: 346 STITSKMNLSEEVDLEDYVARPDKISGADINSICQE 381
Score = 483 (175.1 bits), Expect = 4.8e-46, P = 4.8e-46
Identities = 95/124 (76%), Positives = 108/124 (87%)
Query: 200 DRRQKRLVFSTITAKMNFMLNIGNLQVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQ 259
DR +R++ + F N+ N++VIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQ
Sbjct: 282 DREVQRILLELLNQMDGFDQNV-NVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQ 340
Query: 260 KRLVFSTITAKMNLSDEVDLEDYVARPDRISGADINAICQEAGMHAVRENRYIVLPKDFE 319
KRL+FSTIT+KMNLS+EVDLEDYVARPD+ISGADIN+ICQE+GM AVRENRYIVL KDFE
Sbjct: 341 KRLIFSTITSKMNLSEEVDLEDYVARPDKISGADINSICQESGMLAVRENRYIVLAKDFE 400
Query: 320 KGYK 323
K YK
Sbjct: 401 KAYK 404
Score = 238 (88.8 bits), Expect = 2.3e-30, Sum P(2) = 2.3e-30
Identities = 48/61 (78%), Positives = 55/61 (90%)
Query: 156 DRISGADINAICQEVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLVFSTITAKM 215
+++ G D N + +VIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRL+FSTIT+KM
Sbjct: 294 NQMDGFDQN-VNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLIFSTITSKM 352
Query: 216 N 216
N
Sbjct: 353 N 353
Score = 148 (57.2 bits), Expect = 9.4e-82, Sum P(2) = 9.4e-82
Identities = 29/37 (78%), Positives = 30/37 (81%)
Query: 326 AGMHAVRENRYIVLPKDFEKGYKNNTKKDESEHEFYK 362
+GM AVRENRYIVL KDFEK YK KKDE EHEFYK
Sbjct: 382 SGMLAVRENRYIVLAKDFEKAYKTVIKKDEQEHEFYK 418
>UNIPROTKB|E2RH48 [details] [associations]
symbol:PSMC4 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0022624 "proteasome accessory complex"
evidence=IEA] [GO:0005739 "mitochondrion" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0001824 "blastocyst development"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005739 GO:GO:0005524 GO:GO:0005634 GO:GO:0030163
GO:GO:0017111 GO:GO:0001824 TIGRFAMs:TIGR01242 KO:K03063
OMA:DQTTNVK GeneTree:ENSGT00550000074962 EMBL:AAEX03000950
RefSeq:XP_003638879.1 ProteinModelPortal:E2RH48 SMR:E2RH48
PRIDE:E2RH48 Ensembl:ENSCAFT00000008685 GeneID:100855613
KEGG:cfa:100855613 NextBio:20852115 Uniprot:E2RH48
Length = 418
Score = 691 (248.3 bits), Expect = 9.4e-82, Sum P(2) = 9.4e-82
Identities = 136/156 (87%), Positives = 142/156 (91%)
Query: 14 AFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENSPXXXXXXXXXXXXTKRFDAQTGADREV 73
AFIRVVGSEFVQKYLGEGPRMVRDVFRLAKEN+P TKRFDAQTGADREV
Sbjct: 226 AFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENAPAIIFIDEIDAIATKRFDAQTGADREV 285
Query: 74 QRILLELLNQMDGFDQTTNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLVF 133
QRILLELLNQMDGFDQ NVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRL+F
Sbjct: 286 QRILLELLNQMDGFDQNVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLIF 345
Query: 134 STITAKMNLSDEVDLEDYVARPDRISGADINAICQE 169
STIT+KMNLS+EVDLEDYVARPD+ISGADIN+ICQE
Sbjct: 346 STITSKMNLSEEVDLEDYVARPDKISGADINSICQE 381
Score = 483 (175.1 bits), Expect = 4.8e-46, P = 4.8e-46
Identities = 95/124 (76%), Positives = 108/124 (87%)
Query: 200 DRRQKRLVFSTITAKMNFMLNIGNLQVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQ 259
DR +R++ + F N+ N++VIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQ
Sbjct: 282 DREVQRILLELLNQMDGFDQNV-NVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQ 340
Query: 260 KRLVFSTITAKMNLSDEVDLEDYVARPDRISGADINAICQEAGMHAVRENRYIVLPKDFE 319
KRL+FSTIT+KMNLS+EVDLEDYVARPD+ISGADIN+ICQE+GM AVRENRYIVL KDFE
Sbjct: 341 KRLIFSTITSKMNLSEEVDLEDYVARPDKISGADINSICQESGMLAVRENRYIVLAKDFE 400
Query: 320 KGYK 323
K YK
Sbjct: 401 KAYK 404
Score = 238 (88.8 bits), Expect = 2.3e-30, Sum P(2) = 2.3e-30
Identities = 48/61 (78%), Positives = 55/61 (90%)
Query: 156 DRISGADINAICQEVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLVFSTITAKM 215
+++ G D N + +VIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRL+FSTIT+KM
Sbjct: 294 NQMDGFDQN-VNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLIFSTITSKM 352
Query: 216 N 216
N
Sbjct: 353 N 353
Score = 148 (57.2 bits), Expect = 9.4e-82, Sum P(2) = 9.4e-82
Identities = 29/37 (78%), Positives = 30/37 (81%)
Query: 326 AGMHAVRENRYIVLPKDFEKGYKNNTKKDESEHEFYK 362
+GM AVRENRYIVL KDFEK YK KKDE EHEFYK
Sbjct: 382 SGMLAVRENRYIVLAKDFEKAYKTVIKKDEQEHEFYK 418
>UNIPROTKB|P43686 [details] [associations]
symbol:PSMC4 "26S protease regulatory subunit 6B"
species:9606 "Homo sapiens" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0001824 "blastocyst development" evidence=IEA] [GO:0005515
"protein binding" evidence=IPI] [GO:0022624 "proteasome accessory
complex" evidence=ISS] [GO:0000502 "proteasome complex"
evidence=TAS] [GO:0006508 "proteolysis" evidence=TAS] [GO:0016887
"ATPase activity" evidence=TAS] [GO:0005829 "cytosol" evidence=TAS]
[GO:0006521 "regulation of cellular amino acid metabolic process"
evidence=TAS] [GO:0006915 "apoptotic process" evidence=TAS]
[GO:0006977 "DNA damage response, signal transduction by p53 class
mediator resulting in cell cycle arrest" evidence=TAS] [GO:0010467
"gene expression" evidence=TAS] [GO:0016032 "viral reproduction"
evidence=TAS] [GO:0016070 "RNA metabolic process" evidence=TAS]
[GO:0016071 "mRNA metabolic process" evidence=TAS] [GO:0031145
"anaphase-promoting complex-dependent proteasomal
ubiquitin-dependent protein catabolic process" evidence=TAS]
[GO:0034641 "cellular nitrogen compound metabolic process"
evidence=TAS] [GO:0042590 "antigen processing and presentation of
exogenous peptide antigen via MHC class I" evidence=TAS]
[GO:0042981 "regulation of apoptotic process" evidence=TAS]
[GO:0044281 "small molecule metabolic process" evidence=TAS]
[GO:0051436 "negative regulation of ubiquitin-protein ligase
activity involved in mitotic cell cycle" evidence=TAS] [GO:0051437
"positive regulation of ubiquitin-protein ligase activity involved
in mitotic cell cycle" evidence=TAS] [GO:0051439 "regulation of
ubiquitin-protein ligase activity involved in mitotic cell cycle"
evidence=TAS] [GO:0000075 "cell cycle checkpoint" evidence=TAS]
[GO:0000082 "G1/S transition of mitotic cell cycle" evidence=TAS]
[GO:0000084 "S phase of mitotic cell cycle" evidence=TAS]
[GO:0000209 "protein polyubiquitination" evidence=TAS] [GO:0000216
"M/G1 transition of mitotic cell cycle" evidence=TAS] [GO:0000278
"mitotic cell cycle" evidence=TAS] [GO:0002474 "antigen processing
and presentation of peptide antigen via MHC class I" evidence=TAS]
[GO:0002479 "antigen processing and presentation of exogenous
peptide antigen via MHC class I, TAP-dependent" evidence=TAS]
[GO:0005654 "nucleoplasm" evidence=TAS] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005730 "nucleolus" evidence=IDA] [GO:0005737
"cytoplasm" evidence=IDA] [GO:0005739 "mitochondrion" evidence=IDA]
[GO:0006200 "ATP catabolic process" evidence=TAS]
Reactome:REACT_13505 Reactome:REACT_578 Reactome:REACT_71
Reactome:REACT_21257 Reactome:REACT_6850 Reactome:REACT_111217
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005829 GO:GO:0005739 GO:GO:0005524 Reactome:REACT_111102
Reactome:REACT_116125 Reactome:REACT_6900 GO:GO:0006915
GO:GO:0010467 GO:GO:0016071 Reactome:REACT_115566 GO:GO:0005654
GO:GO:0002479 GO:GO:0016032 Reactome:REACT_21300 GO:GO:0006977
GO:GO:0042981 GO:GO:0000082 GO:GO:0016887 GO:GO:0051436
GO:GO:0000216 GO:GO:0000209 GO:GO:0000084 GO:GO:0031145
GO:GO:0051437 GO:GO:0006521 GO:GO:0001824 Reactome:REACT_383
EMBL:AC007842 eggNOG:COG1222 TIGRFAMs:TIGR01242 HOVERGEN:HBG000109
GO:GO:0022624 HOGENOM:HOG000225143 KO:K03063 OMA:DQTTNVK CTD:5704
OrthoDB:EOG4KD6M4 EMBL:AF038965 EMBL:U27515 EMBL:AF020736
EMBL:BT007232 EMBL:BC000343 EMBL:BC010396 EMBL:BC014488
IPI:IPI00020042 IPI:IPI00216770 RefSeq:NP_006494.1
RefSeq:NP_694546.1 UniGene:Hs.211594 PDB:2DVW PDBsum:2DVW
ProteinModelPortal:P43686 SMR:P43686 DIP:DIP-29274N IntAct:P43686
MINT:MINT-5004247 STRING:P43686 PhosphoSite:P43686 DMDM:20532409
OGP:P43686 PaxDb:P43686 PRIDE:P43686 DNASU:5704
Ensembl:ENST00000157812 Ensembl:ENST00000455878 GeneID:5704
KEGG:hsa:5704 UCSC:uc002omq.3 UCSC:uc002omr.3 GeneCards:GC19P040477
HGNC:HGNC:9551 HPA:HPA002044 HPA:HPA005471 MIM:602707
neXtProt:NX_P43686 PharmGKB:PA33896 InParanoid:P43686
PhylomeDB:P43686 ChiTaRS:PSMC4 EvolutionaryTrace:P43686
GenomeRNAi:5704 NextBio:22160 ArrayExpress:P43686 Bgee:P43686
CleanEx:HS_PSMC4 Genevestigator:P43686 GermOnline:ENSG00000013275
Uniprot:P43686
Length = 418
Score = 691 (248.3 bits), Expect = 9.4e-82, Sum P(2) = 9.4e-82
Identities = 136/156 (87%), Positives = 142/156 (91%)
Query: 14 AFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENSPXXXXXXXXXXXXTKRFDAQTGADREV 73
AFIRVVGSEFVQKYLGEGPRMVRDVFRLAKEN+P TKRFDAQTGADREV
Sbjct: 226 AFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENAPAIIFIDEIDAIATKRFDAQTGADREV 285
Query: 74 QRILLELLNQMDGFDQTTNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLVF 133
QRILLELLNQMDGFDQ NVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRL+F
Sbjct: 286 QRILLELLNQMDGFDQNVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLIF 345
Query: 134 STITAKMNLSDEVDLEDYVARPDRISGADINAICQE 169
STIT+KMNLS+EVDLEDYVARPD+ISGADIN+ICQE
Sbjct: 346 STITSKMNLSEEVDLEDYVARPDKISGADINSICQE 381
Score = 483 (175.1 bits), Expect = 4.8e-46, P = 4.8e-46
Identities = 95/124 (76%), Positives = 108/124 (87%)
Query: 200 DRRQKRLVFSTITAKMNFMLNIGNLQVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQ 259
DR +R++ + F N+ N++VIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQ
Sbjct: 282 DREVQRILLELLNQMDGFDQNV-NVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQ 340
Query: 260 KRLVFSTITAKMNLSDEVDLEDYVARPDRISGADINAICQEAGMHAVRENRYIVLPKDFE 319
KRL+FSTIT+KMNLS+EVDLEDYVARPD+ISGADIN+ICQE+GM AVRENRYIVL KDFE
Sbjct: 341 KRLIFSTITSKMNLSEEVDLEDYVARPDKISGADINSICQESGMLAVRENRYIVLAKDFE 400
Query: 320 KGYK 323
K YK
Sbjct: 401 KAYK 404
Score = 238 (88.8 bits), Expect = 2.3e-30, Sum P(2) = 2.3e-30
Identities = 48/61 (78%), Positives = 55/61 (90%)
Query: 156 DRISGADINAICQEVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLVFSTITAKM 215
+++ G D N + +VIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRL+FSTIT+KM
Sbjct: 294 NQMDGFDQN-VNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLIFSTITSKM 352
Query: 216 N 216
N
Sbjct: 353 N 353
Score = 148 (57.2 bits), Expect = 9.4e-82, Sum P(2) = 9.4e-82
Identities = 29/37 (78%), Positives = 30/37 (81%)
Query: 326 AGMHAVRENRYIVLPKDFEKGYKNNTKKDESEHEFYK 362
+GM AVRENRYIVL KDFEK YK KKDE EHEFYK
Sbjct: 382 SGMLAVRENRYIVLAKDFEKAYKTVIKKDEQEHEFYK 418
>UNIPROTKB|Q4R7L3 [details] [associations]
symbol:PSMC4 "26S protease regulatory subunit 6B"
species:9541 "Macaca fascicularis" [GO:0022624 "proteasome
accessory complex" evidence=ISS] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GO:GO:0005634 GO:GO:0005737 GO:GO:0030163 HSSP:Q01853 GO:GO:0017111
TIGRFAMs:TIGR01242 HOVERGEN:HBG000109 GO:GO:0022624 EMBL:AB168803
ProteinModelPortal:Q4R7L3 SMR:Q4R7L3 PRIDE:Q4R7L3 Uniprot:Q4R7L3
Length = 418
Score = 691 (248.3 bits), Expect = 9.4e-82, Sum P(2) = 9.4e-82
Identities = 136/156 (87%), Positives = 142/156 (91%)
Query: 14 AFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENSPXXXXXXXXXXXXTKRFDAQTGADREV 73
AFIRVVGSEFVQKYLGEGPRMVRDVFRLAKEN+P TKRFDAQTGADREV
Sbjct: 226 AFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENAPAIIFIDEIDAIATKRFDAQTGADREV 285
Query: 74 QRILLELLNQMDGFDQTTNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLVF 133
QRILLELLNQMDGFDQ NVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRL+F
Sbjct: 286 QRILLELLNQMDGFDQNVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLIF 345
Query: 134 STITAKMNLSDEVDLEDYVARPDRISGADINAICQE 169
STIT+KMNLS+EVDLEDYVARPD+ISGADIN+ICQE
Sbjct: 346 STITSKMNLSEEVDLEDYVARPDKISGADINSICQE 381
Score = 483 (175.1 bits), Expect = 4.8e-46, P = 4.8e-46
Identities = 95/124 (76%), Positives = 108/124 (87%)
Query: 200 DRRQKRLVFSTITAKMNFMLNIGNLQVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQ 259
DR +R++ + F N+ N++VIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQ
Sbjct: 282 DREVQRILLELLNQMDGFDQNV-NVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQ 340
Query: 260 KRLVFSTITAKMNLSDEVDLEDYVARPDRISGADINAICQEAGMHAVRENRYIVLPKDFE 319
KRL+FSTIT+KMNLS+EVDLEDYVARPD+ISGADIN+ICQE+GM AVRENRYIVL KDFE
Sbjct: 341 KRLIFSTITSKMNLSEEVDLEDYVARPDKISGADINSICQESGMLAVRENRYIVLAKDFE 400
Query: 320 KGYK 323
K YK
Sbjct: 401 KAYK 404
Score = 238 (88.8 bits), Expect = 2.3e-30, Sum P(2) = 2.3e-30
Identities = 48/61 (78%), Positives = 55/61 (90%)
Query: 156 DRISGADINAICQEVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLVFSTITAKM 215
+++ G D N + +VIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRL+FSTIT+KM
Sbjct: 294 NQMDGFDQN-VNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLIFSTITSKM 352
Query: 216 N 216
N
Sbjct: 353 N 353
Score = 148 (57.2 bits), Expect = 9.4e-82, Sum P(2) = 9.4e-82
Identities = 29/37 (78%), Positives = 30/37 (81%)
Query: 326 AGMHAVRENRYIVLPKDFEKGYKNNTKKDESEHEFYK 362
+GM AVRENRYIVL KDFEK YK KKDE EHEFYK
Sbjct: 382 SGMLAVRENRYIVLAKDFEKAYKTVIKKDEQEHEFYK 418
>MGI|MGI:1346093 [details] [associations]
symbol:Psmc4 "proteasome (prosome, macropain) 26S subunit,
ATPase, 4" species:10090 "Mus musculus" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0000502 "proteasome complex"
evidence=IEA] [GO:0001824 "blastocyst development" evidence=IMP]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0022624
"proteasome accessory complex" evidence=IDA] [GO:0030163 "protein
catabolic process" evidence=IEA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 MGI:MGI:1346093
GO:GO:0005739 GO:GO:0005524 GO:GO:0005634 GO:GO:0030163
GO:GO:0017111 GO:GO:0001824 EMBL:CH466593 eggNOG:COG1222
TIGRFAMs:TIGR01242 HOVERGEN:HBG000109 GO:GO:0022624
HOGENOM:HOG000225143 KO:K03063 OMA:DQTTNVK CTD:5704
OrthoDB:EOG4KD6M4 GeneTree:ENSGT00550000074962 EMBL:L76223
EMBL:AB040869 EMBL:AK077507 EMBL:AK153991 EMBL:AK160718
EMBL:AK167041 EMBL:BC012708 IPI:IPI00108895 RefSeq:NP_036004.2
UniGene:Mm.29582 PDB:3AJI PDBsum:3AJI ProteinModelPortal:P54775
SMR:P54775 IntAct:P54775 STRING:P54775 PhosphoSite:P54775
REPRODUCTION-2DPAGE:P54775 PaxDb:P54775 PRIDE:P54775
Ensembl:ENSMUST00000032824 GeneID:23996 KEGG:mmu:23996
InParanoid:Q6ZWN9 EvolutionaryTrace:P54775 NextBio:303909
Bgee:P54775 Genevestigator:P54775 GermOnline:ENSMUSG00000030603
Uniprot:P54775
Length = 418
Score = 691 (248.3 bits), Expect = 9.4e-82, Sum P(2) = 9.4e-82
Identities = 136/156 (87%), Positives = 142/156 (91%)
Query: 14 AFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENSPXXXXXXXXXXXXTKRFDAQTGADREV 73
AFIRVVGSEFVQKYLGEGPRMVRDVFRLAKEN+P TKRFDAQTGADREV
Sbjct: 226 AFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENAPAIIFIDEIDAIATKRFDAQTGADREV 285
Query: 74 QRILLELLNQMDGFDQTTNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLVF 133
QRILLELLNQMDGFDQ NVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRL+F
Sbjct: 286 QRILLELLNQMDGFDQNVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLIF 345
Query: 134 STITAKMNLSDEVDLEDYVARPDRISGADINAICQE 169
STIT+KMNLS+EVDLEDYVARPD+ISGADIN+ICQE
Sbjct: 346 STITSKMNLSEEVDLEDYVARPDKISGADINSICQE 381
Score = 483 (175.1 bits), Expect = 4.8e-46, P = 4.8e-46
Identities = 95/124 (76%), Positives = 108/124 (87%)
Query: 200 DRRQKRLVFSTITAKMNFMLNIGNLQVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQ 259
DR +R++ + F N+ N++VIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQ
Sbjct: 282 DREVQRILLELLNQMDGFDQNV-NVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQ 340
Query: 260 KRLVFSTITAKMNLSDEVDLEDYVARPDRISGADINAICQEAGMHAVRENRYIVLPKDFE 319
KRL+FSTIT+KMNLS+EVDLEDYVARPD+ISGADIN+ICQE+GM AVRENRYIVL KDFE
Sbjct: 341 KRLIFSTITSKMNLSEEVDLEDYVARPDKISGADINSICQESGMLAVRENRYIVLAKDFE 400
Query: 320 KGYK 323
K YK
Sbjct: 401 KAYK 404
Score = 238 (88.8 bits), Expect = 2.3e-30, Sum P(2) = 2.3e-30
Identities = 48/61 (78%), Positives = 55/61 (90%)
Query: 156 DRISGADINAICQEVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLVFSTITAKM 215
+++ G D N + +VIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRL+FSTIT+KM
Sbjct: 294 NQMDGFDQN-VNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLIFSTITSKM 352
Query: 216 N 216
N
Sbjct: 353 N 353
Score = 148 (57.2 bits), Expect = 9.4e-82, Sum P(2) = 9.4e-82
Identities = 29/37 (78%), Positives = 30/37 (81%)
Query: 326 AGMHAVRENRYIVLPKDFEKGYKNNTKKDESEHEFYK 362
+GM AVRENRYIVL KDFEK YK KKDE EHEFYK
Sbjct: 382 SGMLAVRENRYIVLAKDFEKAYKTVIKKDEQEHEFYK 418
>RGD|621102 [details] [associations]
symbol:Psmc4 "proteasome (prosome, macropain) 26S subunit,
ATPase, 4" species:10116 "Rattus norvegicus" [GO:0001824
"blastocyst development" evidence=IEA;ISO] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA;ISO]
[GO:0005737 "cytoplasm" evidence=ISO] [GO:0005739 "mitochondrion"
evidence=IEA;ISO] [GO:0006200 "ATP catabolic process" evidence=TAS]
[GO:0016887 "ATPase activity" evidence=TAS] [GO:0022624 "proteasome
accessory complex" evidence=ISO;ISS] [GO:0030163 "protein catabolic
process" evidence=IEA] [GO:0005730 "nucleolus" evidence=ISO]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
RGD:621102 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0016887
GO:GO:0030163 GO:GO:0001824 eggNOG:COG1222 TIGRFAMs:TIGR01242
HOVERGEN:HBG000109 GO:GO:0022624 HOGENOM:HOG000225143 KO:K03063
OMA:DQTTNVK CTD:5704 OrthoDB:EOG4KD6M4 GeneTree:ENSGT00550000074962
EMBL:D50695 EMBL:BC063145 IPI:IPI00210158 RefSeq:NP_476463.1
UniGene:Rn.11341 PDB:2DWZ PDBsum:2DWZ ProteinModelPortal:Q63570
SMR:Q63570 IntAct:Q63570 STRING:Q63570 PhosphoSite:Q63570
PRIDE:Q63570 Ensembl:ENSRNOT00000025819 GeneID:117262
KEGG:rno:117262 UCSC:RGD:621102 InParanoid:Q63570
EvolutionaryTrace:Q63570 NextBio:620144 Genevestigator:Q63570
GermOnline:ENSRNOG00000018994 Uniprot:Q63570
Length = 418
Score = 691 (248.3 bits), Expect = 9.4e-82, Sum P(2) = 9.4e-82
Identities = 136/156 (87%), Positives = 142/156 (91%)
Query: 14 AFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENSPXXXXXXXXXXXXTKRFDAQTGADREV 73
AFIRVVGSEFVQKYLGEGPRMVRDVFRLAKEN+P TKRFDAQTGADREV
Sbjct: 226 AFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENAPAIIFIDEIDAIATKRFDAQTGADREV 285
Query: 74 QRILLELLNQMDGFDQTTNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLVF 133
QRILLELLNQMDGFDQ NVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRL+F
Sbjct: 286 QRILLELLNQMDGFDQNVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLIF 345
Query: 134 STITAKMNLSDEVDLEDYVARPDRISGADINAICQE 169
STIT+KMNLS+EVDLEDYVARPD+ISGADIN+ICQE
Sbjct: 346 STITSKMNLSEEVDLEDYVARPDKISGADINSICQE 381
Score = 483 (175.1 bits), Expect = 4.8e-46, P = 4.8e-46
Identities = 95/124 (76%), Positives = 108/124 (87%)
Query: 200 DRRQKRLVFSTITAKMNFMLNIGNLQVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQ 259
DR +R++ + F N+ N++VIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQ
Sbjct: 282 DREVQRILLELLNQMDGFDQNV-NVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQ 340
Query: 260 KRLVFSTITAKMNLSDEVDLEDYVARPDRISGADINAICQEAGMHAVRENRYIVLPKDFE 319
KRL+FSTIT+KMNLS+EVDLEDYVARPD+ISGADIN+ICQE+GM AVRENRYIVL KDFE
Sbjct: 341 KRLIFSTITSKMNLSEEVDLEDYVARPDKISGADINSICQESGMLAVRENRYIVLAKDFE 400
Query: 320 KGYK 323
K YK
Sbjct: 401 KAYK 404
Score = 238 (88.8 bits), Expect = 2.3e-30, Sum P(2) = 2.3e-30
Identities = 48/61 (78%), Positives = 55/61 (90%)
Query: 156 DRISGADINAICQEVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLVFSTITAKM 215
+++ G D N + +VIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRL+FSTIT+KM
Sbjct: 294 NQMDGFDQN-VNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLIFSTITSKM 352
Query: 216 N 216
N
Sbjct: 353 N 353
Score = 148 (57.2 bits), Expect = 9.4e-82, Sum P(2) = 9.4e-82
Identities = 29/37 (78%), Positives = 30/37 (81%)
Query: 326 AGMHAVRENRYIVLPKDFEKGYKNNTKKDESEHEFYK 362
+GM AVRENRYIVL KDFEK YK KKDE EHEFYK
Sbjct: 382 SGMLAVRENRYIVLAKDFEKAYKTVIKKDEQEHEFYK 418
>ZFIN|ZDB-GENE-030131-5083 [details] [associations]
symbol:psmc4 "proteasome (prosome, macropain) 26S
subunit, ATPase, 4" species:7955 "Danio rerio" [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0000502 "proteasome complex" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR005937
Pfam:PF00004 SMART:SM00382 ZFIN:ZDB-GENE-030131-5083 GO:GO:0005524
GO:GO:0005737 GO:GO:0030163 GO:GO:0000502 HSSP:Q01853 GO:GO:0017111
TIGRFAMs:TIGR01242 HOVERGEN:HBG000109 EMBL:BC055215 IPI:IPI00509630
UniGene:Dr.76514 ProteinModelPortal:Q7SXX0 SMR:Q7SXX0 STRING:Q7SXX0
PRIDE:Q7SXX0 InParanoid:Q7SXX0 ArrayExpress:Q7SXX0 Bgee:Q7SXX0
Uniprot:Q7SXX0
Length = 418
Score = 686 (246.5 bits), Expect = 1.5e-81, Sum P(2) = 1.5e-81
Identities = 138/163 (84%), Positives = 143/163 (87%)
Query: 14 AFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENSPXXXXXXXXXXXXTKRFDAQTGADREV 73
AFIRVVGSEFVQKYLGEGPRMVRDVFRLAKEN+P TKRFDAQTGADREV
Sbjct: 226 AFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENAPAIIFIDEIDAIATKRFDAQTGADREV 285
Query: 74 QRILLELLNQMDGFDQTTNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLVF 133
QRILLELLNQMDGFDQ NVKVIMATNRADTLDPALL PGRLDRKIEFPLPDRRQKRLVF
Sbjct: 286 QRILLELLNQMDGFDQNVNVKVIMATNRADTLDPALLCPGRLDRKIEFPLPDRRQKRLVF 345
Query: 134 STITAKMNLSDEVDLEDYVARPDRISGADINAICQEVIMATNR 176
STIT+KMNLS+EVDLEDYVARPD+ISGADIN+ICQE M R
Sbjct: 346 STITSKMNLSEEVDLEDYVARPDKISGADINSICQEAGMLAVR 388
Score = 479 (173.7 bits), Expect = 1.3e-45, P = 1.3e-45
Identities = 96/124 (77%), Positives = 107/124 (86%)
Query: 200 DRRQKRLVFSTITAKMNFMLNIGNLQVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQ 259
DR +R++ + F N+ N++VIMATNRADTLDPALL PGRLDRKIEFPLPDRRQ
Sbjct: 282 DREVQRILLELLNQMDGFDQNV-NVKVIMATNRADTLDPALLCPGRLDRKIEFPLPDRRQ 340
Query: 260 KRLVFSTITAKMNLSDEVDLEDYVARPDRISGADINAICQEAGMHAVRENRYIVLPKDFE 319
KRLVFSTIT+KMNLS+EVDLEDYVARPD+ISGADIN+ICQEAGM AVRENRYIVL KDFE
Sbjct: 341 KRLVFSTITSKMNLSEEVDLEDYVARPDKISGADINSICQEAGMLAVRENRYIVLAKDFE 400
Query: 320 KGYK 323
K YK
Sbjct: 401 KAYK 404
Score = 231 (86.4 bits), Expect = 1.3e-29, Sum P(2) = 1.3e-29
Identities = 48/61 (78%), Positives = 54/61 (88%)
Query: 156 DRISGADINAICQEVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLVFSTITAKM 215
+++ G D N + +VIMATNRADTLDPALL PGRLDRKIEFPLPDRRQKRLVFSTIT+KM
Sbjct: 294 NQMDGFDQN-VNVKVIMATNRADTLDPALLCPGRLDRKIEFPLPDRRQKRLVFSTITSKM 352
Query: 216 N 216
N
Sbjct: 353 N 353
Score = 151 (58.2 bits), Expect = 1.5e-81, Sum P(2) = 1.5e-81
Identities = 30/37 (81%), Positives = 30/37 (81%)
Query: 326 AGMHAVRENRYIVLPKDFEKGYKNNTKKDESEHEFYK 362
AGM AVRENRYIVL KDFEK YK KKDE EHEFYK
Sbjct: 382 AGMLAVRENRYIVLAKDFEKAYKTVIKKDEQEHEFYK 418
>WB|WBGene00004503 [details] [associations]
symbol:rpt-3 species:6239 "Caenorhabditis elegans"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0030163 "protein
catabolic process" evidence=IEA] [GO:0006281 "DNA repair"
evidence=IEA] [GO:0006310 "DNA recombination" evidence=IEA]
[GO:0009378 "four-way junction helicase activity" evidence=IEA]
[GO:0016887 "ATPase activity" evidence=IEA] [GO:0009792 "embryo
development ending in birth or egg hatching" evidence=IMP]
[GO:0000003 "reproduction" evidence=IMP] [GO:0002119 "nematode
larval development" evidence=IMP] [GO:0008340 "determination of
adult lifespan" evidence=IMP] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005634 GO:GO:0008340
GO:GO:0009792 GO:GO:0005737 GO:GO:0002119 GO:GO:0000003
GO:GO:0030163 GO:GO:0000502 GO:GO:0017111 eggNOG:COG1222
TIGRFAMs:TIGR01242 HOGENOM:HOG000225143 KO:K03063 OMA:DQTTNVK
EMBL:FO081210 PIR:A88485 RefSeq:NP_498429.1
ProteinModelPortal:P46502 SMR:P46502 DIP:DIP-24412N IntAct:P46502
MINT:MINT-212949 STRING:P46502 PaxDb:P46502
EnsemblMetazoa:F23F12.6.1 EnsemblMetazoa:F23F12.6.2 GeneID:175925
KEGG:cel:CELE_F23F12.6 UCSC:F23F12.6.1 CTD:175925 WormBase:F23F12.6
GeneTree:ENSGT00550000074962 InParanoid:P46502 NextBio:890338
Uniprot:P46502
Length = 414
Score = 683 (245.5 bits), Expect = 9.5e-80, Sum P(2) = 9.5e-80
Identities = 136/175 (77%), Positives = 147/175 (84%)
Query: 2 LLCTSFDTELVTAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENSPXXXXXXXXXXXXTK 61
+L + +FIRVVGSEFVQKYLGEGPRMVRDVFRLAKENSP TK
Sbjct: 210 MLAKAVAANTAASFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENSPSIIFIDEIDAIATK 269
Query: 62 RFDAQTGADREVQRILLELLNQMDGFDQTTNVKVIMATNRADTLDPALLRPGRLDRKIEF 121
RFDAQTGADREVQRILLELLNQMDGFDQ+TNVKVIMATNR DTLDPALLRPGRLDRKIEF
Sbjct: 270 RFDAQTGADREVQRILLELLNQMDGFDQSTNVKVIMATNRQDTLDPALLRPGRLDRKIEF 329
Query: 122 PLPDRRQKRLVFSTITAKMNLSDEVDLEDYVARPDRISGADINAICQEVIMATNR 176
PLPDRRQKRLVFST+ ++MNLSD+VDLED+VARPD+ISGADIN+ICQE M R
Sbjct: 330 PLPDRRQKRLVFSTVCSRMNLSDDVDLEDWVARPDKISGADINSICQEAGMQAVR 384
Score = 455 (165.2 bits), Expect = 4.5e-43, P = 4.5e-43
Identities = 89/124 (71%), Positives = 104/124 (83%)
Query: 200 DRRQKRLVFSTITAKMNFMLNIGNLQVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQ 259
DR +R++ + F + N++VIMATNR DTLDPALLRPGRLDRKIEFPLPDRRQ
Sbjct: 278 DREVQRILLELLNQMDGFDQST-NVKVIMATNRQDTLDPALLRPGRLDRKIEFPLPDRRQ 336
Query: 260 KRLVFSTITAKMNLSDEVDLEDYVARPDRISGADINAICQEAGMHAVRENRYIVLPKDFE 319
KRLVFST+ ++MNLSD+VDLED+VARPD+ISGADIN+ICQEAGM AVRENRY+VL KD E
Sbjct: 337 KRLVFSTVCSRMNLSDDVDLEDWVARPDKISGADINSICQEAGMQAVRENRYVVLTKDLE 396
Query: 320 KGYK 323
K YK
Sbjct: 397 KAYK 400
Score = 219 (82.2 bits), Expect = 1.9e-26, Sum P(2) = 1.9e-26
Identities = 42/48 (87%), Positives = 46/48 (95%)
Query: 169 EVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLVFSTITAKMN 216
+VIMATNR DTLDPALLRPGRLDRKIEFPLPDRRQKRLVFST+ ++MN
Sbjct: 302 KVIMATNRQDTLDPALLRPGRLDRKIEFPLPDRRQKRLVFSTVCSRMN 349
Score = 137 (53.3 bits), Expect = 9.5e-80, Sum P(2) = 9.5e-80
Identities = 26/37 (70%), Positives = 29/37 (78%)
Query: 326 AGMHAVRENRYIVLPKDFEKGYKNNTKKDESEHEFYK 362
AGM AVRENRY+VL KD EK YKN KKD ++ EFYK
Sbjct: 378 AGMQAVRENRYVVLTKDLEKAYKNVVKKDTNDFEFYK 414
>TAIR|locus:2161258 [details] [associations]
symbol:RPT3 "regulatory particle triple-A ATPase 3"
species:3702 "Arabidopsis thaliana" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0016887 "ATPase
activity" evidence=IGI;ISS] [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0006511 "ubiquitin-dependent protein catabolic
process" evidence=RCA;TAS] [GO:0005634 "nucleus" evidence=TAS]
[GO:0005618 "cell wall" evidence=IDA] [GO:0016020 "membrane"
evidence=IDA] [GO:0000502 "proteasome complex" evidence=IDA]
[GO:0005829 "cytosol" evidence=IDA] [GO:0009506 "plasmodesma"
evidence=IDA] [GO:0006094 "gluconeogenesis" evidence=RCA]
[GO:0006635 "fatty acid beta-oxidation" evidence=RCA] [GO:0006888
"ER to Golgi vesicle-mediated transport" evidence=RCA] [GO:0007010
"cytoskeleton organization" evidence=RCA] [GO:0009407 "toxin
catabolic process" evidence=RCA] [GO:0009735 "response to cytokinin
stimulus" evidence=RCA] [GO:0009853 "photorespiration"
evidence=RCA] [GO:0010498 "proteasomal protein catabolic process"
evidence=RCA] [GO:0043090 "amino acid import" evidence=RCA]
[GO:0043161 "proteasomal ubiquitin-dependent protein catabolic
process" evidence=RCA] [GO:0043248 "proteasome assembly"
evidence=RCA] [GO:0048767 "root hair elongation" evidence=RCA]
[GO:0051788 "response to misfolded protein" evidence=RCA]
[GO:0080129 "proteasome core complex assembly" evidence=RCA]
[GO:0008540 "proteasome regulatory particle, base subcomplex"
evidence=IDA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005829 GO:GO:0009506 GO:GO:0005524
GO:GO:0005634 EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0005618
GO:GO:0016020 EMBL:AB019228 GO:GO:0030163 GO:GO:0000502
GO:GO:0017111 eggNOG:COG1222 TIGRFAMs:TIGR01242
HOGENOM:HOG000225143 EMBL:AF123392 EMBL:AY070466 EMBL:BT020373
IPI:IPI00537564 RefSeq:NP_200637.1 UniGene:At.45955
ProteinModelPortal:Q9SEI4 SMR:Q9SEI4 IntAct:Q9SEI4 STRING:Q9SEI4
PaxDb:Q9SEI4 PRIDE:Q9SEI4 EnsemblPlants:AT5G58290.1 GeneID:835941
KEGG:ath:AT5G58290 GeneFarm:1500 TAIR:At5g58290 InParanoid:Q9SEI4
KO:K03063 OMA:DQTTNVK ProtClustDB:CLSN2686094 Genevestigator:Q9SEI4
GermOnline:AT5G58290 Uniprot:Q9SEI4
Length = 408
Score = 664 (238.8 bits), Expect = 1.5e-79, Sum P(2) = 1.5e-79
Identities = 133/171 (77%), Positives = 141/171 (82%)
Query: 2 LLCTSFDTELVTAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENSPXXXXXXXXXXXXTK 61
+L + AFIRVVGSEFVQKYLGEGPRMVRDVFRLAKEN+P T
Sbjct: 204 MLAKAVANHTTAAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENAPAIIFIDEVDAIATA 263
Query: 62 RFDAQTGADREVQRILLELLNQMDGFDQTTNVKVIMATNRADTLDPALLRPGRLDRKIEF 121
RFDAQTGADREVQRIL+ELLNQMDGFDQT NVKVIMATNRADTLDPALLRPGRLDRKIEF
Sbjct: 264 RFDAQTGADREVQRILMELLNQMDGFDQTVNVKVIMATNRADTLDPALLRPGRLDRKIEF 323
Query: 122 PLPDRRQKRLVFSTITAKMNLSDEVDLEDYVARPDRISGADINAICQEVIM 172
PLPDRRQKRLVF T+KMNLSDEVDLEDYV+RPD+IS A+I AICQE M
Sbjct: 324 PLPDRRQKRLVFQVCTSKMNLSDEVDLEDYVSRPDKISAAEIAAICQEAGM 374
Score = 469 (170.2 bits), Expect = 1.5e-44, P = 1.5e-44
Identities = 90/124 (72%), Positives = 105/124 (84%)
Query: 200 DRRQKRLVFSTITAKMNFMLNIGNLQVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQ 259
DR +R++ + F + N++VIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQ
Sbjct: 272 DREVQRILMELLNQMDGFDQTV-NVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQ 330
Query: 260 KRLVFSTITAKMNLSDEVDLEDYVARPDRISGADINAICQEAGMHAVRENRYIVLPKDFE 319
KRLVF T+KMNLSDEVDLEDYV+RPD+IS A+I AICQEAGMHAVR+NRY++LPKDFE
Sbjct: 331 KRLVFQVCTSKMNLSDEVDLEDYVSRPDKISAAEIAAICQEAGMHAVRKNRYVILPKDFE 390
Query: 320 KGYK 323
KGY+
Sbjct: 391 KGYR 394
Score = 222 (83.2 bits), Expect = 1.1e-28, Sum P(2) = 1.1e-28
Identities = 45/61 (73%), Positives = 51/61 (83%)
Query: 156 DRISGADINAICQEVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLVFSTITAKM 215
+++ G D + +VIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLVF T+KM
Sbjct: 284 NQMDGFD-QTVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLVFQVCTSKM 342
Query: 216 N 216
N
Sbjct: 343 N 343
Score = 154 (59.3 bits), Expect = 1.5e-79, Sum P(2) = 1.5e-79
Identities = 26/37 (70%), Positives = 33/37 (89%)
Query: 326 AGMHAVRENRYIVLPKDFEKGYKNNTKKDESEHEFYK 362
AGMHAVR+NRY++LPKDFEKGY+ N KK +++ EFYK
Sbjct: 372 AGMHAVRKNRYVILPKDFEKGYRANVKKPDTDFEFYK 408
>FB|FBgn0037742 [details] [associations]
symbol:Rpt3R "Regulatory particle triple-A ATPase 3-related"
species:7227 "Drosophila melanogaster" [GO:0006508 "proteolysis"
evidence=ISS] [GO:0008540 "proteasome regulatory particle, base
subcomplex" evidence=ISS] [GO:0016887 "ATPase activity"
evidence=ISS] [GO:0030163 "protein catabolic process" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0000502 "proteasome complex" evidence=NAS]
[GO:0006974 "response to DNA damage stimulus" evidence=IMP]
InterPro:IPR001270 InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PRINTS:PR00300
PROSITE:PS00674 SMART:SM00382 EMBL:AE014297 GO:GO:0005524
GO:GO:0005737 GO:GO:0006200 GO:GO:0006974 GO:GO:0016887
GO:GO:0030163 TIGRFAMs:TIGR01242 KO:K03063
GeneTree:ENSGT00550000074962 FlyBase:FBgn0037742 EMBL:BT016035
RefSeq:NP_649938.2 UniGene:Dm.21651 SMR:Q9VH79 STRING:Q9VH79
EnsemblMetazoa:FBtr0301536 EnsemblMetazoa:FBtr0332172 GeneID:41190
KEGG:dme:Dmel_CG9475 UCSC:CG9475-RA CTD:41190 InParanoid:Q9VH79
OMA:KQSNCLV OrthoDB:EOG49GHZ0 GenomeRNAi:41190 NextBio:822637
Uniprot:Q9VH79
Length = 405
Score = 662 (238.1 bits), Expect = 2.0e-79, Sum P(2) = 2.0e-79
Identities = 129/159 (81%), Positives = 141/159 (88%)
Query: 14 AFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENSPXXXXXXXXXXXXTKRFDAQTGADREV 73
+FIRVVGSEFVQKYLGEGPRMVRD+FRLAK+NSP TKRFDAQTGADREV
Sbjct: 213 SFIRVVGSEFVQKYLGEGPRMVRDLFRLAKQNSPSIIFIDEIDAIATKRFDAQTGADREV 272
Query: 74 QRILLELLNQMDGFDQTTNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLVF 133
QRILLELLNQMDGFD+TTN+KVIMATNRADTLDPALLRPGRLDRKIE PLPDRRQKRLVF
Sbjct: 273 QRILLELLNQMDGFDETTNIKVIMATNRADTLDPALLRPGRLDRKIELPLPDRRQKRLVF 332
Query: 134 STITAKMNLSDEVDLEDYVARPDRISGADINAICQEVIM 172
+TIT+KMN+ ++VDLED +ARPD+IS ADINAICQE M
Sbjct: 333 TTITSKMNVGEDVDLEDIIARPDKISNADINAICQEAGM 371
Score = 458 (166.3 bits), Expect = 2.2e-43, P = 2.2e-43
Identities = 89/124 (71%), Positives = 105/124 (84%)
Query: 200 DRRQKRLVFSTITAKMNFMLNIGNLQVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQ 259
DR +R++ + +M+ N++VIMATNRADTLDPALLRPGRLDRKIE PLPDRRQ
Sbjct: 269 DREVQRILLELLN-QMDGFDETTNIKVIMATNRADTLDPALLRPGRLDRKIELPLPDRRQ 327
Query: 260 KRLVFSTITAKMNLSDEVDLEDYVARPDRISGADINAICQEAGMHAVRENRYIVLPKDFE 319
KRLVF+TIT+KMN+ ++VDLED +ARPD+IS ADINAICQEAGMHAVRENRY+V KDFE
Sbjct: 328 KRLVFTTITSKMNVGEDVDLEDIIARPDKISNADINAICQEAGMHAVRENRYVVNAKDFE 387
Query: 320 KGYK 323
KGYK
Sbjct: 388 KGYK 391
Score = 228 (85.3 bits), Expect = 1.1e-29, Sum P(2) = 1.1e-29
Identities = 50/71 (70%), Positives = 59/71 (83%)
Query: 169 EVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLVFSTITAKMNFMLNIGNLQVIM 228
+VIMATNRADTLDPALLRPGRLDRKIE PLPDRRQKRLVF+TIT+KMN ++ +L+ I+
Sbjct: 293 KVIMATNRADTLDPALLRPGRLDRKIELPLPDRRQKRLVFTTITSKMNVGEDV-DLEDII 351
Query: 229 ATNRADTLDPA 239
A R D + A
Sbjct: 352 A--RPDKISNA 360
Score = 155 (59.6 bits), Expect = 2.0e-79, Sum P(2) = 2.0e-79
Identities = 27/36 (75%), Positives = 32/36 (88%)
Query: 326 AGMHAVRENRYIVLPKDFEKGYKNNTKKDESEHEFY 361
AGMHAVRENRY+V KDFEKGYK + +KDE++HEFY
Sbjct: 369 AGMHAVRENRYVVNAKDFEKGYKTSVRKDEAQHEFY 404
>DICTYBASE|DDB_G0289003 [details] [associations]
symbol:psmC4 "HIV TAT binding-protein-related"
species:44689 "Dictyostelium discoideum" [GO:0045335 "phagocytic
vesicle" evidence=IDA] [GO:0006972 "hyperosmotic response"
evidence=IEP] [GO:0030163 "protein catabolic process" evidence=IEA]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0006508
"proteolysis" evidence=ISS] [GO:0005838 "proteasome regulatory
particle" evidence=ISS] [GO:0004175 "endopeptidase activity"
evidence=ISS] [GO:0005634 "nucleus" evidence=IEA] [GO:0000502
"proteasome complex" evidence=IEA] [GO:0044351 "macropinocytosis"
evidence=RCA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 dictyBase:DDB_G0289003 GO:GO:0005524 GO:GO:0005634
GO:GO:0045335 GO:GO:0006508 GenomeReviews:CM000154_GR GO:GO:0006972
GO:GO:0004175 EMBL:AAFI02000129 GO:GO:0030163 GO:GO:0017111
eggNOG:COG1222 TIGRFAMs:TIGR01242 KO:K03063 OMA:DQTTNVK EMBL:L16578
PIR:JN0611 RefSeq:XP_636422.1 ProteinModelPortal:P34123 SMR:P34123
STRING:P34123 PRIDE:P34123 EnsemblProtists:DDB0191435
GeneID:8626913 KEGG:ddi:DDB_G0289003 ProtClustDB:PTZ00454
GO:GO:0005838 Uniprot:P34123
Length = 403
Score = 656 (236.0 bits), Expect = 3.2e-77, Sum P(2) = 3.2e-77
Identities = 128/159 (80%), Positives = 139/159 (87%)
Query: 14 AFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENSPXXXXXXXXXXXXTKRFDAQTGADREV 73
AFIRVVGSEFVQKYLGEGPR+VRDVFRLA+ENSP TKRFDAQTGADREV
Sbjct: 211 AFIRVVGSEFVQKYLGEGPRLVRDVFRLARENSPAIIFIDEIDAIATKRFDAQTGADREV 270
Query: 74 QRILLELLNQMDGFDQTTNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLVF 133
QRIL+ELLNQMDGFD + NVKVIMATNR DTLDPALLRPGRLDRKIEFPLPDRRQKRL+F
Sbjct: 271 QRILMELLNQMDGFDVSVNVKVIMATNRQDTLDPALLRPGRLDRKIEFPLPDRRQKRLIF 330
Query: 134 STITAKMNLSDEVDLEDYVARPDRISGADINAICQEVIM 172
IT+KMNLSDEVDLEDYV+RPD++SGA+I +ICQE M
Sbjct: 331 QVITSKMNLSDEVDLEDYVSRPDKLSGAEIQSICQEAGM 369
Score = 477 (173.0 bits), Expect = 2.1e-45, P = 2.1e-45
Identities = 88/124 (70%), Positives = 108/124 (87%)
Query: 200 DRRQKRLVFSTITAKMNFMLNIGNLQVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQ 259
DR +R++ + F +++ N++VIMATNR DTLDPALLRPGRLDRKIEFPLPDRRQ
Sbjct: 267 DREVQRILMELLNQMDGFDVSV-NVKVIMATNRQDTLDPALLRPGRLDRKIEFPLPDRRQ 325
Query: 260 KRLVFSTITAKMNLSDEVDLEDYVARPDRISGADINAICQEAGMHAVRENRYIVLPKDFE 319
KRL+F IT+KMNLSDEVDLEDYV+RPD++SGA+I +ICQEAGMHA+R+NRY++LPKDFE
Sbjct: 326 KRLIFQVITSKMNLSDEVDLEDYVSRPDKLSGAEIQSICQEAGMHAIRKNRYVILPKDFE 385
Query: 320 KGYK 323
KGYK
Sbjct: 386 KGYK 389
Score = 225 (84.3 bits), Expect = 1.1e-27, Sum P(2) = 1.1e-27
Identities = 44/61 (72%), Positives = 53/61 (86%)
Query: 156 DRISGADINAICQEVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLVFSTITAKM 215
+++ G D++ + +VIMATNR DTLDPALLRPGRLDRKIEFPLPDRRQKRL+F IT+KM
Sbjct: 279 NQMDGFDVS-VNVKVIMATNRQDTLDPALLRPGRLDRKIEFPLPDRRQKRLIFQVITSKM 337
Query: 216 N 216
N
Sbjct: 338 N 338
Score = 140 (54.3 bits), Expect = 3.2e-77, Sum P(2) = 3.2e-77
Identities = 24/36 (66%), Positives = 30/36 (83%)
Query: 326 AGMHAVRENRYIVLPKDFEKGYKNNTKKDESEHEFY 361
AGMHA+R+NRY++LPKDFEKGYK + KK+ E FY
Sbjct: 367 AGMHAIRKNRYVILPKDFEKGYKASIKKNTHEFNFY 402
>GENEDB_PFALCIPARUM|PFD0665c [details] [associations]
symbol:PFD0665c "26s proteasome aaa-ATPase
subunit Rpt3, putative" species:5833 "Plasmodium falciparum"
[GO:0005838 "proteasome regulatory particle" evidence=ISS]
[GO:0016887 "ATPase activity" evidence=ISS] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=ISS]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0005737 GO:GO:0016887 GO:GO:0006511 HSSP:Q01853
EMBL:AL844503 TIGRFAMs:TIGR01242 HOGENOM:HOG000225143 KO:K03063
OMA:DQTTNVK ProtClustDB:PTZ00454 GO:GO:0005838
RefSeq:XP_001351444.1 ProteinModelPortal:Q8I1V1 IntAct:Q8I1V1
MINT:MINT-1573247 PRIDE:Q8I1V1 EnsemblProtists:PFD0665c:mRNA
GeneID:812570 KEGG:pfa:PFD0665c EuPathDB:PlasmoDB:PF3D7_0413600
Uniprot:Q8I1V1
Length = 392
Score = 618 (222.6 bits), Expect = 4.7e-70, Sum P(2) = 4.7e-70
Identities = 125/175 (71%), Positives = 139/175 (79%)
Query: 2 LLCTSFDTELVTAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENSPXXXXXXXXXXXXTK 61
+L + E FI VVGSEFVQKYLGEGPRMVRDVFRLA+ENSP TK
Sbjct: 187 MLVKAVANETQVTFIGVVGSEFVQKYLGEGPRMVRDVFRLARENSPSIIFIDEVDAIATK 246
Query: 62 RFDAQTGADREVQRILLELLNQMDGFDQTTNVKVIMATNRADTLDPALLRPGRLDRKIEF 121
RFDAQTGADREVQRILLELLNQMDGFD++TNVKVIMATNRADTLDPALLRPGRLDRKIEF
Sbjct: 247 RFDAQTGADREVQRILLELLNQMDGFDKSTNVKVIMATNRADTLDPALLRPGRLDRKIEF 306
Query: 122 PLPDRRQKRLVFSTITAKMNLSDEVDLEDYVARPDRISGADINAICQEVIMATNR 176
PLPDR+QKRL+F TI +KMN+S +V++E +V R D+IS ADI AI QE M R
Sbjct: 307 PLPDRKQKRLIFQTIISKMNVSSDVNIESFVVRTDKISAADIAAIAQEAGMQAIR 361
Score = 393 (143.4 bits), Expect = 1.7e-36, P = 1.7e-36
Identities = 76/124 (61%), Positives = 97/124 (78%)
Query: 200 DRRQKRLVFSTITAKMNFMLNIGNLQVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQ 259
DR +R++ + F + N++VIMATNRADTLDPALLRPGRLDRKIEFPLPDR+Q
Sbjct: 255 DREVQRILLELLNQMDGFDKST-NVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRKQ 313
Query: 260 KRLVFSTITAKMNLSDEVDLEDYVARPDRISGADINAICQEAGMHAVRENRYIVLPKDFE 319
KRL+F TI +KMN+S +V++E +V R D+IS ADI AI QEAGM A+R+NRYI+ DFE
Sbjct: 314 KRLIFQTIISKMNVSSDVNIESFVVRTDKISAADIAAIAQEAGMQAIRKNRYIITANDFE 373
Query: 320 KGYK 323
+GY+
Sbjct: 374 QGYR 377
Score = 230 (86.0 bits), Expect = 2.1e-25, Sum P(2) = 2.1e-25
Identities = 45/73 (61%), Positives = 56/73 (76%)
Query: 169 EVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLVFSTITAKMNFMLNIGNLQVIM 228
+VIMATNRADTLDPALLRPGRLDRKIEFPLPDR+QKRL+F TI +KMN ++ ++
Sbjct: 279 KVIMATNRADTLDPALLRPGRLDRKIEFPLPDRKQKRLIFQTIISKMNVSSDVNIESFVV 338
Query: 229 ATNRADTLDPALL 241
T++ D A +
Sbjct: 339 RTDKISAADIAAI 351
Score = 110 (43.8 bits), Expect = 4.7e-70, Sum P(2) = 4.7e-70
Identities = 18/36 (50%), Positives = 27/36 (75%)
Query: 326 AGMHAVRENRYIVLPKDFEKGYKNNTKKDESEHEFY 361
AGM A+R+NRYI+ DFE+GY+ + +K ++EFY
Sbjct: 355 AGMQAIRKNRYIITANDFEQGYRTHVRKQLRDYEFY 390
>UNIPROTKB|Q8I1V1 [details] [associations]
symbol:PFD0665c "26S proteasome AAA-ATPase subunit RPT3,
putative" species:36329 "Plasmodium falciparum 3D7" [GO:0005838
"proteasome regulatory particle" evidence=ISS] [GO:0006200 "ATP
catabolic process" evidence=ISS] [GO:0006511 "ubiquitin-dependent
protein catabolic process" evidence=ISS] [GO:0016887 "ATPase
activity" evidence=ISS] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005737 GO:GO:0016887
GO:GO:0006511 HSSP:Q01853 EMBL:AL844503 TIGRFAMs:TIGR01242
HOGENOM:HOG000225143 KO:K03063 OMA:DQTTNVK ProtClustDB:PTZ00454
GO:GO:0005838 RefSeq:XP_001351444.1 ProteinModelPortal:Q8I1V1
IntAct:Q8I1V1 MINT:MINT-1573247 PRIDE:Q8I1V1
EnsemblProtists:PFD0665c:mRNA GeneID:812570 KEGG:pfa:PFD0665c
EuPathDB:PlasmoDB:PF3D7_0413600 Uniprot:Q8I1V1
Length = 392
Score = 618 (222.6 bits), Expect = 4.7e-70, Sum P(2) = 4.7e-70
Identities = 125/175 (71%), Positives = 139/175 (79%)
Query: 2 LLCTSFDTELVTAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENSPXXXXXXXXXXXXTK 61
+L + E FI VVGSEFVQKYLGEGPRMVRDVFRLA+ENSP TK
Sbjct: 187 MLVKAVANETQVTFIGVVGSEFVQKYLGEGPRMVRDVFRLARENSPSIIFIDEVDAIATK 246
Query: 62 RFDAQTGADREVQRILLELLNQMDGFDQTTNVKVIMATNRADTLDPALLRPGRLDRKIEF 121
RFDAQTGADREVQRILLELLNQMDGFD++TNVKVIMATNRADTLDPALLRPGRLDRKIEF
Sbjct: 247 RFDAQTGADREVQRILLELLNQMDGFDKSTNVKVIMATNRADTLDPALLRPGRLDRKIEF 306
Query: 122 PLPDRRQKRLVFSTITAKMNLSDEVDLEDYVARPDRISGADINAICQEVIMATNR 176
PLPDR+QKRL+F TI +KMN+S +V++E +V R D+IS ADI AI QE M R
Sbjct: 307 PLPDRKQKRLIFQTIISKMNVSSDVNIESFVVRTDKISAADIAAIAQEAGMQAIR 361
Score = 393 (143.4 bits), Expect = 1.7e-36, P = 1.7e-36
Identities = 76/124 (61%), Positives = 97/124 (78%)
Query: 200 DRRQKRLVFSTITAKMNFMLNIGNLQVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQ 259
DR +R++ + F + N++VIMATNRADTLDPALLRPGRLDRKIEFPLPDR+Q
Sbjct: 255 DREVQRILLELLNQMDGFDKST-NVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRKQ 313
Query: 260 KRLVFSTITAKMNLSDEVDLEDYVARPDRISGADINAICQEAGMHAVRENRYIVLPKDFE 319
KRL+F TI +KMN+S +V++E +V R D+IS ADI AI QEAGM A+R+NRYI+ DFE
Sbjct: 314 KRLIFQTIISKMNVSSDVNIESFVVRTDKISAADIAAIAQEAGMQAIRKNRYIITANDFE 373
Query: 320 KGYK 323
+GY+
Sbjct: 374 QGYR 377
Score = 230 (86.0 bits), Expect = 2.1e-25, Sum P(2) = 2.1e-25
Identities = 45/73 (61%), Positives = 56/73 (76%)
Query: 169 EVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLVFSTITAKMNFMLNIGNLQVIM 228
+VIMATNRADTLDPALLRPGRLDRKIEFPLPDR+QKRL+F TI +KMN ++ ++
Sbjct: 279 KVIMATNRADTLDPALLRPGRLDRKIEFPLPDRKQKRLIFQTIISKMNVSSDVNIESFVV 338
Query: 229 ATNRADTLDPALL 241
T++ D A +
Sbjct: 339 RTDKISAADIAAI 351
Score = 110 (43.8 bits), Expect = 4.7e-70, Sum P(2) = 4.7e-70
Identities = 18/36 (50%), Positives = 27/36 (75%)
Query: 326 AGMHAVRENRYIVLPKDFEKGYKNNTKKDESEHEFY 361
AGM A+R+NRYI+ DFE+GY+ + +K ++EFY
Sbjct: 355 AGMQAIRKNRYIITANDFEQGYRTHVRKQLRDYEFY 390
>UNIPROTKB|F1LZ09 [details] [associations]
symbol:F1LZ09 "Uncharacterized protein" species:10116
"Rattus norvegicus" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0030163
"protein catabolic process" evidence=IEA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR005937 Pfam:PF00004 SMART:SM00382
GO:GO:0005739 GO:GO:0005524 GO:GO:0005634 GO:GO:0030163
GO:GO:0017111 TIGRFAMs:TIGR01242 IPI:IPI00780208
Ensembl:ENSRNOT00000039743 Uniprot:F1LZ09
Length = 369
Score = 602 (217.0 bits), Expect = 7.7e-64, Sum P(2) = 7.7e-64
Identities = 121/173 (69%), Positives = 136/173 (78%)
Query: 2 LLCTSFDTELVTAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENSPXXXXXXXXXXXXTK 61
+L + ++ AFI VVGSEFV KYLGEGPR++ DVF L KEN+P TK
Sbjct: 163 MLAKTVAHHMIAAFIHVVGSEFVHKYLGEGPRIIWDVFHLDKENAPAIIFIDEIDAIATK 222
Query: 62 RFDAQTGADREVQRILLELLNQMDGFDQTTNVKVIMATNRADTLDPALLRPGRLDRKIEF 121
RFDAQTGADREVQRILLELLNQMDGFDQ +VK IMATNR DTLDP LLRPG LD KIEF
Sbjct: 223 RFDAQTGADREVQRILLELLNQMDGFDQNISVKAIMATNRKDTLDPTLLRPGHLDHKIEF 282
Query: 122 PLPDRRQKRLVFSTITAKMNLSDEVDLEDYVARPDRISGADINAICQEVIMAT 174
PLPD R KRL+FSTIT+KMNLS+EV++EDYVA PD+ISGADIN+ICQE M T
Sbjct: 283 PLPDHR-KRLIFSTITSKMNLSEEVNVEDYVACPDKISGADINSICQESGMLT 334
Score = 387 (141.3 bits), Expect = 7.2e-36, P = 7.2e-36
Identities = 79/124 (63%), Positives = 96/124 (77%)
Query: 200 DRRQKRLVFSTITAKMNFMLNIGNLQVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQ 259
DR +R++ + F NI +++ IMATNR DTLDP LLRPG LD KIEFPLPD R
Sbjct: 231 DREVQRILLELLNQMDGFDQNI-SVKAIMATNRKDTLDPTLLRPGHLDHKIEFPLPDHR- 288
Query: 260 KRLVFSTITAKMNLSDEVDLEDYVARPDRISGADINAICQEAGMHAVRENRYIVLPKDFE 319
KRL+FSTIT+KMNLS+EV++EDYVA PD+ISGADIN+ICQE+GM V EN +I L KDF+
Sbjct: 289 KRLIFSTITSKMNLSEEVNVEDYVACPDKISGADINSICQESGMLTVCENCHIFLAKDFK 348
Query: 320 KGYK 323
K YK
Sbjct: 349 KAYK 352
Score = 199 (75.1 bits), Expect = 7.4e-17, Sum P(2) = 7.4e-17
Identities = 42/61 (68%), Positives = 48/61 (78%)
Query: 156 DRISGADINAICQEVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLVFSTITAKM 215
+++ G D N I + IMATNR DTLDP LLRPG LD KIEFPLPD R KRL+FSTIT+KM
Sbjct: 243 NQMDGFDQN-ISVKAIMATNRKDTLDPTLLRPGHLDHKIEFPLPDHR-KRLIFSTITSKM 300
Query: 216 N 216
N
Sbjct: 301 N 301
Score = 67 (28.6 bits), Expect = 7.7e-64, Sum P(2) = 7.7e-64
Identities = 15/28 (53%), Positives = 18/28 (64%)
Query: 326 AGMHAVRENRYIVLPKDFEKGYKNNTKK 353
+GM V EN +I L KDF+K YK KK
Sbjct: 330 SGMLTVCENCHIFLAKDFKKAYKTVIKK 357
>CGD|CAL0001552 [details] [associations]
symbol:PR26 species:5476 "Candida albicans" [GO:0005838
"proteasome regulatory particle" evidence=ISS] [GO:0005829
"cytosol" evidence=IEA] [GO:0008540 "proteasome regulatory
particle, base subcomplex" evidence=IEA] [GO:0070682 "proteasome
regulatory particle assembly" evidence=IEA] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=IEA]
[GO:0045899 "positive regulation of RNA polymerase II
transcriptional preinitiation complex assembly" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
CGD:CAL0001552 GO:GO:0005524 GO:GO:0005737 GO:GO:0030163
GO:GO:0017111 EMBL:AACQ01000088 EMBL:AACQ01000087 eggNOG:COG1222
TIGRFAMs:TIGR01242 KO:K03063 GO:GO:0005838 RefSeq:XP_715269.1
RefSeq:XP_715334.1 ProteinModelPortal:Q5A0L8 SMR:Q5A0L8
STRING:Q5A0L8 GeneID:3642981 GeneID:3643038 KEGG:cal:CaO19.13215
KEGG:cal:CaO19.5793 Uniprot:Q5A0L8
Length = 411
Score = 576 (207.8 bits), Expect = 5.4e-63, Sum P(2) = 5.4e-63
Identities = 118/169 (69%), Positives = 133/169 (78%)
Query: 2 LLCTSFDTELVTAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENSPXXXXXXXXXXXXTK 61
+L + +FIR+ GSEFVQKYLGEGPRMVRDVFRLA+ENSP TK
Sbjct: 204 MLVKAVANSTTASFIRINGSEFVQKYLGEGPRMVRDVFRLARENSPAIIFIDEIDAIATK 263
Query: 62 RFDAQTGADREVQRILLELLNQMDGFDQTTNVKVIMATNRADTLDPALLRPGRLDRKIEF 121
RFDAQTGADREVQRILLELLNQMDGFDQT+ VKVIMATNRADTLDPALLRPGRLDRKIEF
Sbjct: 264 RFDAQTGADREVQRILLELLNQMDGFDQTSTVKVIMATNRADTLDPALLRPGRLDRKIEF 323
Query: 122 P-LPDRRQKRLVFSTITAKMNLSDEVDLEDYVARPDRISGADINAICQE 169
P L DRR++RL+FSTI +KM+L+ E DL+ + R D +SGA I AI QE
Sbjct: 324 PSLKDRRERRLIFSTIASKMSLAPEADLDSLIIRNDPLSGAVIAAIMQE 372
Score = 344 (126.2 bits), Expect = 2.6e-31, P = 2.6e-31
Identities = 82/195 (42%), Positives = 119/195 (61%)
Query: 129 KRLVFSTITAKMNLSDEVDLEDYVARPDRISGADINAICQEVIMATNRADTLDPALLRPG 188
K + ST + + ++ ++ Y+ R+ D+ + +E A D +D +
Sbjct: 207 KAVANSTTASFIRINGSEFVQKYLGEGPRMV-RDVFRLARENSPAIIFIDEIDAIATK-- 263
Query: 189 RLDRKIEFPLPDRRQKRLVFSTITAKMNFMLNIGNLQVIMATNRADTLDPALLRPGRLDR 248
R D + DR +R++ + +M+ ++VIMATNRADTLDPALLRPGRLDR
Sbjct: 264 RFDAQTG---ADREVQRILLELLN-QMDGFDQTSTVKVIMATNRADTLDPALLRPGRLDR 319
Query: 249 KIEFP-LPDRRQKRLVFSTITAKMNLSDEVDLEDYVARPDRISGADINAICQEAGMHAVR 307
KIEFP L DRR++RL+FSTI +KM+L+ E DL+ + R D +SGA I AI QEAG+ AVR
Sbjct: 320 KIEFPSLKDRRERRLIFSTIASKMSLAPEADLDSLIIRNDPLSGAVIAAIMQEAGLRAVR 379
Query: 308 ENRYIVLPKDFEKGY 322
+NRY++L D E+ Y
Sbjct: 380 KNRYMILQSDLEEAY 394
Score = 85 (35.0 bits), Expect = 5.4e-63, Sum P(2) = 5.4e-63
Identities = 18/40 (45%), Positives = 26/40 (65%)
Query: 326 AGMHAVRENRYIVLPKDFEKGYKNNTKKDESEHE---FYK 362
AG+ AVR+NRY++L D E+ Y + K +EH+ FYK
Sbjct: 373 AGLRAVRKNRYMILQSDLEEAYTSQVKTG-TEHDKFDFYK 411
>UNIPROTKB|Q5A0L8 [details] [associations]
symbol:PR26 "Likely 26S proteasome regulatory particle
ATPase Rpt3p" species:237561 "Candida albicans SC5314" [GO:0005838
"proteasome regulatory particle" evidence=ISS] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 CGD:CAL0001552
GO:GO:0005524 GO:GO:0005737 GO:GO:0030163 GO:GO:0017111
EMBL:AACQ01000088 EMBL:AACQ01000087 eggNOG:COG1222
TIGRFAMs:TIGR01242 KO:K03063 GO:GO:0005838 RefSeq:XP_715269.1
RefSeq:XP_715334.1 ProteinModelPortal:Q5A0L8 SMR:Q5A0L8
STRING:Q5A0L8 GeneID:3642981 GeneID:3643038 KEGG:cal:CaO19.13215
KEGG:cal:CaO19.5793 Uniprot:Q5A0L8
Length = 411
Score = 576 (207.8 bits), Expect = 5.4e-63, Sum P(2) = 5.4e-63
Identities = 118/169 (69%), Positives = 133/169 (78%)
Query: 2 LLCTSFDTELVTAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENSPXXXXXXXXXXXXTK 61
+L + +FIR+ GSEFVQKYLGEGPRMVRDVFRLA+ENSP TK
Sbjct: 204 MLVKAVANSTTASFIRINGSEFVQKYLGEGPRMVRDVFRLARENSPAIIFIDEIDAIATK 263
Query: 62 RFDAQTGADREVQRILLELLNQMDGFDQTTNVKVIMATNRADTLDPALLRPGRLDRKIEF 121
RFDAQTGADREVQRILLELLNQMDGFDQT+ VKVIMATNRADTLDPALLRPGRLDRKIEF
Sbjct: 264 RFDAQTGADREVQRILLELLNQMDGFDQTSTVKVIMATNRADTLDPALLRPGRLDRKIEF 323
Query: 122 P-LPDRRQKRLVFSTITAKMNLSDEVDLEDYVARPDRISGADINAICQE 169
P L DRR++RL+FSTI +KM+L+ E DL+ + R D +SGA I AI QE
Sbjct: 324 PSLKDRRERRLIFSTIASKMSLAPEADLDSLIIRNDPLSGAVIAAIMQE 372
Score = 344 (126.2 bits), Expect = 2.6e-31, P = 2.6e-31
Identities = 82/195 (42%), Positives = 119/195 (61%)
Query: 129 KRLVFSTITAKMNLSDEVDLEDYVARPDRISGADINAICQEVIMATNRADTLDPALLRPG 188
K + ST + + ++ ++ Y+ R+ D+ + +E A D +D +
Sbjct: 207 KAVANSTTASFIRINGSEFVQKYLGEGPRMV-RDVFRLARENSPAIIFIDEIDAIATK-- 263
Query: 189 RLDRKIEFPLPDRRQKRLVFSTITAKMNFMLNIGNLQVIMATNRADTLDPALLRPGRLDR 248
R D + DR +R++ + +M+ ++VIMATNRADTLDPALLRPGRLDR
Sbjct: 264 RFDAQTG---ADREVQRILLELLN-QMDGFDQTSTVKVIMATNRADTLDPALLRPGRLDR 319
Query: 249 KIEFP-LPDRRQKRLVFSTITAKMNLSDEVDLEDYVARPDRISGADINAICQEAGMHAVR 307
KIEFP L DRR++RL+FSTI +KM+L+ E DL+ + R D +SGA I AI QEAG+ AVR
Sbjct: 320 KIEFPSLKDRRERRLIFSTIASKMSLAPEADLDSLIIRNDPLSGAVIAAIMQEAGLRAVR 379
Query: 308 ENRYIVLPKDFEKGY 322
+NRY++L D E+ Y
Sbjct: 380 KNRYMILQSDLEEAY 394
Score = 85 (35.0 bits), Expect = 5.4e-63, Sum P(2) = 5.4e-63
Identities = 18/40 (45%), Positives = 26/40 (65%)
Query: 326 AGMHAVRENRYIVLPKDFEKGYKNNTKKDESEHE---FYK 362
AG+ AVR+NRY++L D E+ Y + K +EH+ FYK
Sbjct: 373 AGLRAVRKNRYMILQSDLEEAYTSQVKTG-TEHDKFDFYK 411
>ASPGD|ASPL0000036562 [details] [associations]
symbol:AN2904 species:162425 "Emericella nidulans"
[GO:0070682 "proteasome regulatory particle assembly" evidence=IEA]
[GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=IEA] [GO:0045899 "positive regulation of RNA polymerase II
transcriptional preinitiation complex assembly" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005829
"cytosol" evidence=IEA] [GO:0008540 "proteasome regulatory
particle, base subcomplex" evidence=IEA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GO:GO:0005737 EMBL:BN001306 GO:GO:0030163 GO:GO:0000502
GO:GO:0017111 TIGRFAMs:TIGR01242 EnsemblFungi:CADANIAT00010185
OMA:EDAYSAQ Uniprot:C8VJ79
Length = 422
Score = 580 (209.2 bits), Expect = 2.9e-62, Sum P(2) = 2.9e-62
Identities = 119/169 (70%), Positives = 135/169 (79%)
Query: 2 LLCTSFDTELVTAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENSPXXXXXXXXXXXXTK 61
+L + +FIRV GSEFVQKYLGEGPRMVRDVFR+A+ENSP TK
Sbjct: 215 MLVKAVANSTTASFIRVNGSEFVQKYLGEGPRMVRDVFRMARENSPAIIFIDEIDAIATK 274
Query: 62 RFDAQTGADREVQRILLELLNQMDGFDQTTNVKVIMATNRADTLDPALLRPGRLDRKIEF 121
RFDAQTGADREVQRILLELLNQMDGF+QT+NVKVIMATNRADTLDPALLRPGRLDRKIEF
Sbjct: 275 RFDAQTGADREVQRILLELLNQMDGFEQTSNVKVIMATNRADTLDPALLRPGRLDRKIEF 334
Query: 122 P-LPDRRQKRLVFSTITAKMNLSDEVDLEDYVARPDRISGADINAICQE 169
P L DRR++RL+FSTI +KM+LS EVDL+ + R + +SGA I AI QE
Sbjct: 335 PSLRDRRERRLIFSTIASKMSLSPEVDLDSLIVRNEPLSGAVIAAIMQE 383
Score = 344 (126.2 bits), Expect = 2.6e-31, P = 2.6e-31
Identities = 83/195 (42%), Positives = 119/195 (61%)
Query: 129 KRLVFSTITAKMNLSDEVDLEDYVARPDRISGADINAICQEVIMATNRADTLDPALLRPG 188
K + ST + + ++ ++ Y+ R+ D+ + +E A D +D +
Sbjct: 218 KAVANSTTASFIRVNGSEFVQKYLGEGPRMV-RDVFRMARENSPAIIFIDEIDAIATK-- 274
Query: 189 RLDRKIEFPLPDRRQKRLVFSTITAKMNFMLNIGNLQVIMATNRADTLDPALLRPGRLDR 248
R D + DR +R++ + +M+ N++VIMATNRADTLDPALLRPGRLDR
Sbjct: 275 RFDAQTG---ADREVQRILLELLN-QMDGFEQTSNVKVIMATNRADTLDPALLRPGRLDR 330
Query: 249 KIEFP-LPDRRQKRLVFSTITAKMNLSDEVDLEDYVARPDRISGADINAICQEAGMHAVR 307
KIEFP L DRR++RL+FSTI +KM+LS EVDL+ + R + +SGA I AI QEAG+ AVR
Sbjct: 331 KIEFPSLRDRRERRLIFSTIASKMSLSPEVDLDSLIVRNEPLSGAVIAAIMQEAGLRAVR 390
Query: 308 ENRYIVLPKDFEKGY 322
+NRY ++ D E Y
Sbjct: 391 KNRYNIIQSDLEDAY 405
Score = 74 (31.1 bits), Expect = 2.9e-62, Sum P(2) = 2.9e-62
Identities = 16/39 (41%), Positives = 23/39 (58%)
Query: 326 AGMHAVRENRYIVLPKDFEKGYKNNTKK-DESEH-EFYK 362
AG+ AVR+NRY ++ D E Y K E++ EFY+
Sbjct: 384 AGLRAVRKNRYNIIQSDLEDAYSAQVKTGQEADRLEFYR 422
>SGD|S000002802 [details] [associations]
symbol:RPT3 "ATPase of the 19S regulatory particle of the 26S
proteasome" species:4932 "Saccharomyces cerevisiae" [GO:0008540
"proteasome regulatory particle, base subcomplex" evidence=IDA]
[GO:0030163 "protein catabolic process" evidence=IEA] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=IMP]
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0000502
"proteasome complex" evidence=IEA] [GO:0016887 "ATPase activity"
evidence=ISS] [GO:0045899 "positive regulation of RNA polymerase II
transcriptional preinitiation complex assembly" evidence=IMP]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0070682
"proteasome regulatory particle assembly" evidence=IMP]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
SGD:S000002802 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737
EMBL:BK006938 GO:GO:0006511 GO:GO:0017111 GO:GO:0045899 EMBL:U32274
KO:K07101 RefSeq:NP_010687.3 GeneID:852008 KEGG:sce:YDR399W
GO:GO:0070682 eggNOG:COG1222 TIGRFAMs:TIGR01242
HOGENOM:HOG000225143 GO:GO:0008540 PDB:4B4T PDBsum:4B4T KO:K03063
OMA:DQTTNVK GeneTree:ENSGT00550000074962 OrthoDB:EOG46HKKC
EMBL:X73570 EMBL:U06229 PIR:S69678 RefSeq:NP_010682.3 PDB:2DZN
PDB:2DZO PDBsum:2DZN PDBsum:2DZO ProteinModelPortal:P33298
SMR:P33298 DIP:DIP-1587N IntAct:P33298 MINT:MINT-383865
STRING:P33298 PaxDb:P33298 PeptideAtlas:P33298 EnsemblFungi:YDR394W
GeneID:852003 KEGG:sce:YDR394W EvolutionaryTrace:P33298
NextBio:970192 Genevestigator:P33298 GermOnline:YDR394W
Uniprot:P33298
Length = 428
Score = 562 (202.9 bits), Expect = 3.7e-62, Sum P(2) = 3.7e-62
Identities = 114/157 (72%), Positives = 128/157 (81%)
Query: 14 AFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENSPXXXXXXXXXXXXTKRFDAQTGADREV 73
AFIRV GSEFV KYLGEGPRMVRDVFRLA+EN+P TKRFDAQTG+DREV
Sbjct: 233 AFIRVNGSEFVHKYLGEGPRMVRDVFRLARENAPSIIFIDEVDSIATKRFDAQTGSDREV 292
Query: 74 QRILLELLNQMDGFDQTTNVKVIMATNRADTLDPALLRPGRLDRKIEFP-LPDRRQKRLV 132
QRIL+ELL QMDGFDQ+TNVKVIMATNRADTLDPALLRPGRLDRKIEFP L DRR++RL+
Sbjct: 293 QRILIELLTQMDGFDQSTNVKVIMATNRADTLDPALLRPGRLDRKIEFPSLRDRRERRLI 352
Query: 133 FSTITAKMNLSDEVDLEDYVARPDRISGADINAICQE 169
F TI +KM+L+ E DL+ + R D +SGA I AI QE
Sbjct: 353 FGTIASKMSLAPEADLDSLIIRNDSLSGAVIAAIMQE 389
Score = 347 (127.2 bits), Expect = 1.3e-31, P = 1.3e-31
Identities = 71/124 (57%), Positives = 92/124 (74%)
Query: 200 DRRQKRLVFSTITAKMNFMLNIGNLQVIMATNRADTLDPALLRPGRLDRKIEFP-LPDRR 258
DR +R++ +T F + N++VIMATNRADTLDPALLRPGRLDRKIEFP L DRR
Sbjct: 289 DREVQRILIELLTQMDGFDQST-NVKVIMATNRADTLDPALLRPGRLDRKIEFPSLRDRR 347
Query: 259 QKRLVFSTITAKMNLSDEVDLEDYVARPDRISGADINAICQEAGMHAVRENRYIVLPKDF 318
++RL+F TI +KM+L+ E DL+ + R D +SGA I AI QEAG+ AVR+NRY++L D
Sbjct: 348 ERRLIFGTIASKMSLAPEADLDSLIIRNDSLSGAVIAAIMQEAGLRAVRKNRYVILQSDL 407
Query: 319 EKGY 322
E+ Y
Sbjct: 408 EEAY 411
Score = 197 (74.4 bits), Expect = 1.0e-18, Sum P(2) = 1.0e-18
Identities = 44/74 (59%), Positives = 56/74 (75%)
Query: 169 EVIMATNRADTLDPALLRPGRLDRKIEFP-LPDRRQKRLVFSTITAKMNFMLNIGNLQVI 227
+VIMATNRADTLDPALLRPGRLDRKIEFP L DRR++RL+F TI +KM+ +L +
Sbjct: 313 KVIMATNRADTLDPALLRPGRLDRKIEFPSLRDRRERRLIFGTIASKMSLAPE-ADLDSL 371
Query: 228 MATNRADTLDPALL 241
+ N D+L A++
Sbjct: 372 IIRN--DSLSGAVI 383
Score = 91 (37.1 bits), Expect = 3.7e-62, Sum P(2) = 3.7e-62
Identities = 17/39 (43%), Positives = 25/39 (64%)
Query: 326 AGMHAVRENRYIVLPKDFEKGYKNNTKKDES--EHEFYK 362
AG+ AVR+NRY++L D E+ Y K D + + +FYK
Sbjct: 390 AGLRAVRKNRYVILQSDLEEAYATQVKTDNTVDKFDFYK 428
>POMBASE|SPCC576.10c [details] [associations]
symbol:rpt3 "19S proteasome regulatory subunit Rpt3
(predicted)" species:4896 "Schizosaccharomyces pombe" [GO:0005524
"ATP binding" evidence=IC] [GO:0005634 "nucleus" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IDA] [GO:0005829 "cytosol"
evidence=IDA] [GO:0006511 "ubiquitin-dependent protein catabolic
process" evidence=ISO] [GO:0008540 "proteasome regulatory particle,
base subcomplex" evidence=ISO] [GO:0016887 "ATPase activity"
evidence=ISO] [GO:0004175 "endopeptidase activity" evidence=ISO]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
PomBase:SPCC576.10c GO:GO:0005829 GO:GO:0005524 GO:GO:0005634
EMBL:CU329672 GenomeReviews:CU329672_GR GO:GO:0016887 GO:GO:0006511
eggNOG:COG1222 TIGRFAMs:TIGR01242 HOGENOM:HOG000225143
GO:GO:0008540 KO:K03063 OMA:DQTTNVK PIR:T41420 RefSeq:NP_588437.1
ProteinModelPortal:O74894 SMR:O74894 STRING:O74894 PRIDE:O74894
EnsemblFungi:SPCC576.10c.1 GeneID:2539539 KEGG:spo:SPCC576.10c
OrthoDB:EOG46HKKC NextBio:20800700 Uniprot:O74894
Length = 389
Score = 583 (210.3 bits), Expect = 6.1e-62, Sum P(2) = 6.1e-62
Identities = 120/165 (72%), Positives = 133/165 (80%)
Query: 15 FIRVVGSEFVQKYLGEGPRMVRDVFRLAKENSPXXXXXXXXXXXXTKRFDAQTGADREVQ 74
FIRVVGSEFVQKYLGEGPRMVRDVFR+A+EN+P TKRFDAQTGADREVQ
Sbjct: 196 FIRVVGSEFVQKYLGEGPRMVRDVFRMARENAPAIIFIDEIDAIATKRFDAQTGADREVQ 255
Query: 75 RILLELLNQMDGFDQTTNVKVIMATNRADTLDPALLRPGRLDRKIEFP-LPDRRQKRLVF 133
RIL+ELL QMDGFDQ NVKVIMATNRADTLDPALLRPGRLDRKIEFP DRRQ+RLVF
Sbjct: 256 RILIELLTQMDGFDQGANVKVIMATNRADTLDPALLRPGRLDRKIEFPSYRDRRQRRLVF 315
Query: 134 STITAKMNLSDEVDLEDYVARPDRISGADINAICQEV-IMATNRA 177
TITAKM LS EVDL+ ++ RPD SGA I AI Q+ ++A ++
Sbjct: 316 QTITAKMLLSPEVDLDTFIMRPDASSGAQIAAIMQDAGLLAVRKS 360
Score = 348 (127.6 bits), Expect = 9.8e-32, P = 9.8e-32
Identities = 74/126 (58%), Positives = 92/126 (73%)
Query: 200 DRRQKRLVFSTITAKMNFMLNIGNLQVIMATNRADTLDPALLRPGRLDRKIEFP-LPDRR 258
DR +R++ +T F N++VIMATNRADTLDPALLRPGRLDRKIEFP DRR
Sbjct: 251 DREVQRILIELLTQMDGFDQG-ANVKVIMATNRADTLDPALLRPGRLDRKIEFPSYRDRR 309
Query: 259 QKRLVFSTITAKMNLSDEVDLEDYVARPDRISGADINAICQEAGMHAVRENRYIVLPKDF 318
Q+RLVF TITAKM LS EVDL+ ++ RPD SGA I AI Q+AG+ AVR++R ++L D
Sbjct: 310 QRRLVFQTITAKMLLSPEVDLDTFIMRPDASSGAQIAAIMQDAGLLAVRKSRGVILQSDI 369
Query: 319 EKGYKK 324
E+ Y +
Sbjct: 370 EEAYAR 375
Score = 201 (75.8 bits), Expect = 4.6e-17, Sum P(2) = 4.6e-17
Identities = 42/48 (87%), Positives = 44/48 (91%)
Query: 169 EVIMATNRADTLDPALLRPGRLDRKIEFP-LPDRRQKRLVFSTITAKM 215
+VIMATNRADTLDPALLRPGRLDRKIEFP DRRQ+RLVF TITAKM
Sbjct: 275 KVIMATNRADTLDPALLRPGRLDRKIEFPSYRDRRQRRLVFQTITAKM 322
Score = 68 (29.0 bits), Expect = 6.1e-62, Sum P(2) = 6.1e-62
Identities = 15/38 (39%), Positives = 22/38 (57%)
Query: 326 AGMHAVRENRYIVLPKDFEKGYKNNTKKDESEH-EFYK 362
AG+ AVR++R ++L D E+ Y K + E FYK
Sbjct: 352 AGLLAVRKSRGVILQSDIEEAYARAVKPTDMEQFAFYK 389
>WB|WBGene00004502 [details] [associations]
symbol:rpt-2 species:6239 "Caenorhabditis elegans"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0030163 "protein
catabolic process" evidence=IEA] [GO:0009792 "embryo development
ending in birth or egg hatching" evidence=IMP] [GO:0000003
"reproduction" evidence=IMP] [GO:0008340 "determination of adult
lifespan" evidence=IMP] [GO:0031625 "ubiquitin protein ligase
binding" evidence=IPI] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005634 GO:GO:0008340
GO:GO:0009792 GO:GO:0005737 GO:GO:0000003 GO:GO:0030163
GO:GO:0000502 GO:GO:0017111 eggNOG:COG1222 TIGRFAMs:TIGR01242
HOGENOM:HOG000225143 KO:K03062 OMA:FIRNQER EMBL:FO080494 PIR:T31800
RefSeq:NP_504558.1 ProteinModelPortal:O16368 SMR:O16368
IntAct:O16368 MINT:MINT-210699 STRING:O16368 PaxDb:O16368
PRIDE:O16368 EnsemblMetazoa:F29G9.5.1 EnsemblMetazoa:F29G9.5.2
GeneID:178988 KEGG:cel:CELE_F29G9.5 UCSC:F29G9.5 CTD:178988
WormBase:F29G9.5 GeneTree:ENSGT00550000074818 InParanoid:O16368
NextBio:903424 Uniprot:O16368
Length = 443
Score = 493 (178.6 bits), Expect = 1.6e-51, Sum P(2) = 1.6e-51
Identities = 89/168 (52%), Positives = 124/168 (73%)
Query: 2 LLCTSFDTELVTAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENSPXXXXXXXXXXXXTK 61
LL + + F+R+VGSE +QKYLG+GP+MVR++FR+A+EN+P TK
Sbjct: 237 LLAKAVANQTSATFLRIVGSELIQKYLGDGPKMVRELFRVAEENAPSIVFIDEIDAVGTK 296
Query: 62 RFDAQTGADREVQRILLELLNQMDGFDQTTNVKVIMATNRADTLDPALLRPGRLDRKIEF 121
R+D+ +G +RE+QR +LELLNQ+DGFD +VKV+MATNR ++LDPAL+RPGR+DRKIEF
Sbjct: 297 RYDSNSGGEREIQRTMLELLNQLDGFDSRGDVKVLMATNRIESLDPALIRPGRIDRKIEF 356
Query: 122 PLPDRRQKRLVFSTITAKMNLSDEVDLEDYVARPDRISGADINAICQE 169
PLPD + KR +F T++M L EV+LE+++ D +SGADI A+C E
Sbjct: 357 PLPDEKTKRRIFQIHTSRMTLGKEVNLEEFITAKDELSGADIKAMCTE 404
Score = 300 (110.7 bits), Expect = 1.3e-26, P = 1.3e-26
Identities = 55/99 (55%), Positives = 77/99 (77%)
Query: 222 GNLQVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLVFSTITAKMNLSDEVDLED 281
G+++V+MATNR ++LDPAL+RPGR+DRKIEFPLPD + KR +F T++M L EV+LE+
Sbjct: 326 GDVKVLMATNRIESLDPALIRPGRIDRKIEFPLPDEKTKRRIFQIHTSRMTLGKEVNLEE 385
Query: 282 YVARPDRISGADINAICQEAGMHAVRENRYIVLPKDFEK 320
++ D +SGADI A+C EAG+ A+RE R V +DF+K
Sbjct: 386 FITAKDELSGADIKAMCTEAGLLALRERRMRVTMEDFQK 424
Score = 170 (64.9 bits), Expect = 5.0e-12, Sum P(2) = 5.0e-12
Identities = 33/69 (47%), Positives = 46/69 (66%)
Query: 169 EVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLVFSTITAKMNFMLNIGNLQVIM 228
+V+MATNR ++LDPAL+RPGR+DRKIEFPLPD + KR +F T++M + + I
Sbjct: 329 KVLMATNRIESLDPALIRPGRIDRKIEFPLPDEKTKRRIFQIHTSRMTLGKEVNLEEFIT 388
Query: 229 ATNRADTLD 237
A + D
Sbjct: 389 AKDELSGAD 397
Score = 59 (25.8 bits), Expect = 1.6e-51, Sum P(2) = 1.6e-51
Identities = 15/38 (39%), Positives = 22/38 (57%)
Query: 326 AGMHAVRENRYIVLPKDFEKGYKN--NTKKDESEHEFY 361
AG+ A+RE R V +DF+K +N KK+ + E Y
Sbjct: 405 AGLLALRERRMRVTMEDFQKSKENVLYRKKEGAPEELY 442
>DICTYBASE|DDB_G0270784 [details] [associations]
symbol:psmC1 "TAT binding protein alpha"
species:44689 "Dictyostelium discoideum" [GO:0045335 "phagocytic
vesicle" evidence=IDA] [GO:0030587 "sorocarp development"
evidence=IMP] [GO:0000910 "cytokinesis" evidence=IMP] [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0000502 "proteasome complex" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
dictyBase:DDB_G0270784 GO:GO:0005524 GO:GO:0005634
EMBL:AAFI02000005 GenomeReviews:CM000150_GR GO:GO:0045335
GO:GO:0030587 GO:GO:0000910 GO:GO:0030163 GO:GO:0000502
GO:GO:0017111 HSSP:Q9WZ49 eggNOG:COG1222 TIGRFAMs:TIGR01242
KO:K03062 OMA:FIRNQER RefSeq:XP_646726.1 ProteinModelPortal:Q55BV5
STRING:Q55BV5 PRIDE:Q55BV5 EnsemblProtists:DDB0232964
GeneID:8617698 KEGG:ddi:DDB_G0270784 ProtClustDB:PTZ00361
Uniprot:Q55BV5
Length = 439
Score = 511 (184.9 bits), Expect = 2.0e-51, Sum P(2) = 2.0e-51
Identities = 97/168 (57%), Positives = 127/168 (75%)
Query: 2 LLCTSFDTELVTAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENSPXXXXXXXXXXXXTK 61
LL + + F+RVVGSE +QKYLG+GP++VR++FR+A E +P TK
Sbjct: 233 LLAKAVANQTSATFLRVVGSELIQKYLGDGPKLVRELFRVADECAPSIVFIDEIDAVGTK 292
Query: 62 RFDAQTGADREVQRILLELLNQMDGFDQTTNVKVIMATNRADTLDPALLRPGRLDRKIEF 121
R+D+Q+G +RE+QR +LELLNQ+DGFD T+VKVIMATNR +TLDPAL+RPGR+DRKIEF
Sbjct: 293 RYDSQSGGEREIQRTMLELLNQLDGFDARTDVKVIMATNRIETLDPALIRPGRIDRKIEF 352
Query: 122 PLPDRRQKRLVFSTITAKMNLSDEVDLEDYVARPDRISGADINAICQE 169
PLPD + KR +F TAKMNLS++V+LE++V D +SGADI AIC E
Sbjct: 353 PLPDIKTKRKIFEIHTAKMNLSEDVNLEEFVMSKDDLSGADIKAICTE 400
Score = 314 (115.6 bits), Expect = 3.9e-28, P = 3.9e-28
Identities = 64/110 (58%), Positives = 83/110 (75%)
Query: 223 NLQVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLVFSTITAKMNLSDEVDLEDY 282
+++VIMATNR +TLDPAL+RPGR+DRKIEFPLPD + KR +F TAKMNLS++V+LE++
Sbjct: 323 DVKVIMATNRIETLDPALIRPGRIDRKIEFPLPDIKTKRKIFEIHTAKMNLSEDVNLEEF 382
Query: 283 VARPDRISGADINAICQEAGMHAVRENRYIVLPKDFEKG-----YKKCAG 327
V D +SGADI AIC E+G+ A+RE R V DF+K Y+K AG
Sbjct: 383 VMSKDDLSGADIKAICTESGLLALRERRMRVTHTDFKKAKEKVLYRKTAG 432
Score = 187 (70.9 bits), Expect = 4.0e-12, Sum P(2) = 4.0e-12
Identities = 36/61 (59%), Positives = 47/61 (77%)
Query: 169 EVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLVFSTITAKMNFMLNIGNLQVIM 228
+VIMATNR +TLDPAL+RPGR+DRKIEFPLPD + KR +F TAKMN ++ + +M
Sbjct: 325 KVIMATNRIETLDPALIRPGRIDRKIEFPLPDIKTKRKIFEIHTAKMNLSEDVNLEEFVM 384
Query: 229 A 229
+
Sbjct: 385 S 385
Score = 40 (19.1 bits), Expect = 2.0e-51, Sum P(2) = 2.0e-51
Identities = 9/20 (45%), Positives = 13/20 (65%)
Query: 326 AGMHAVRENRYIVLPKDFEK 345
+G+ A+RE R V DF+K
Sbjct: 401 SGLLALRERRMRVTHTDFKK 420
>UNIPROTKB|A4FUZ3 [details] [associations]
symbol:PSMC1 "Proteasome (Prosome, macropain) 26S subunit,
ATPase, 1" species:9913 "Bos taurus" [GO:0022624 "proteasome
accessory complex" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737
GO:GO:0030163 GO:GO:0000502 GO:GO:0017111 eggNOG:COG1222
TIGRFAMs:TIGR01242 HOVERGEN:HBG000109 HOGENOM:HOG000225143
OMA:FIRNQER GeneTree:ENSGT00550000074818 OrthoDB:EOG4D7Z5Q
EMBL:DAAA02030032 EMBL:BC123487 IPI:IPI00695877 UniGene:Bt.12340
SMR:A4FUZ3 STRING:A4FUZ3 Ensembl:ENSBTAT00000007135
InParanoid:A4FUZ3 Uniprot:A4FUZ3
Length = 440
Score = 491 (177.9 bits), Expect = 6.8e-51, Sum P(2) = 6.8e-51
Identities = 92/173 (53%), Positives = 127/173 (73%)
Query: 2 LLCTSFDTELVTAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENSPXXXXXXXXXXXXTK 61
LL + + F+RVVGSE +QKYLG+GP++VR++FR+A+E++P TK
Sbjct: 234 LLAKAVANQTSATFLRVVGSELIQKYLGDGPKLVRELFRVAEEHAPSIVFIDEIDAIGTK 293
Query: 62 RFDAQTGADREVQRILLELLNQMDGFDQTTNVKVIMATNRADTLDPALLRPGRLDRKIEF 121
R+D+ +G +RE+QR +LELLNQ+DGFD +VKVIMATNR +TLDPAL+RPGR+DRKIEF
Sbjct: 294 RYDSNSGGEREIQRTMLELLNQLDGFDSRGDVKVIMATNRIETLDPALIRPGRIDRKIEF 353
Query: 122 PLPDRRQKRLVFSTITAKMNLSDEVDLEDYVARPDRISGADINAICQEV-IMA 173
PLPD + K+ +F T++M L+D+V L+D + D +SGADI AIC E +MA
Sbjct: 354 PLPDEKTKKRIFQIHTSRMTLADDVTLDDLIMAKDDLSGADIKAICTEAGLMA 406
Score = 305 (112.4 bits), Expect = 3.5e-27, P = 3.5e-27
Identities = 61/111 (54%), Positives = 81/111 (72%)
Query: 222 GNLQVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLVFSTITAKMNLSDEVDLED 281
G+++VIMATNR +TLDPAL+RPGR+DRKIEFPLPD + K+ +F T++M L+D+V L+D
Sbjct: 323 GDVKVIMATNRIETLDPALIRPGRIDRKIEFPLPDEKTKKRIFQIHTSRMTLADDVTLDD 382
Query: 282 YVARPDRISGADINAICQEAGMHAVRENRYIVLPKDFEKG-----YKKCAG 327
+ D +SGADI AIC EAG+ A+RE R V +DF+K YKK G
Sbjct: 383 LIMAKDDLSGADIKAICTEAGLMALRERRMKVTNEDFKKSKENVLYKKQEG 433
Score = 175 (66.7 bits), Expect = 3.2e-12, Sum P(2) = 3.2e-12
Identities = 34/61 (55%), Positives = 46/61 (75%)
Query: 169 EVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLVFSTITAKMNFMLNIGNLQVIM 228
+VIMATNR +TLDPAL+RPGR+DRKIEFPLPD + K+ +F T++M ++ +IM
Sbjct: 326 KVIMATNRIETLDPALIRPGRIDRKIEFPLPDEKTKKRIFQIHTSRMTLADDVTLDDLIM 385
Query: 229 A 229
A
Sbjct: 386 A 386
Score = 55 (24.4 bits), Expect = 6.8e-51, Sum P(2) = 6.8e-51
Identities = 15/35 (42%), Positives = 20/35 (57%)
Query: 326 AGMHAVRENRYIVLPKDFEKGYKNNT-KKDESEHE 359
AG+ A+RE R V +DF+K +N KK E E
Sbjct: 402 AGLMALRERRMKVTNEDFKKSKENVLYKKQEGTPE 436
>UNIPROTKB|F1PQ40 [details] [associations]
symbol:PSMC1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0030163 "protein catabolic process" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005737 GO:GO:0030163
GO:GO:0017111 TIGRFAMs:TIGR01242 KO:K03062 OMA:FIRNQER
GeneTree:ENSGT00550000074818 CTD:5700 EMBL:AAEX03005924
RefSeq:NP_001238880.1 ProteinModelPortal:F1PQ40
Ensembl:ENSCAFT00000027737 GeneID:100688636 KEGG:cfa:100688636
Uniprot:F1PQ40
Length = 440
Score = 491 (177.9 bits), Expect = 6.8e-51, Sum P(2) = 6.8e-51
Identities = 92/173 (53%), Positives = 127/173 (73%)
Query: 2 LLCTSFDTELVTAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENSPXXXXXXXXXXXXTK 61
LL + + F+RVVGSE +QKYLG+GP++VR++FR+A+E++P TK
Sbjct: 234 LLAKAVANQTSATFLRVVGSELIQKYLGDGPKLVRELFRVAEEHAPSIVFIDEIDAIGTK 293
Query: 62 RFDAQTGADREVQRILLELLNQMDGFDQTTNVKVIMATNRADTLDPALLRPGRLDRKIEF 121
R+D+ +G +RE+QR +LELLNQ+DGFD +VKVIMATNR +TLDPAL+RPGR+DRKIEF
Sbjct: 294 RYDSNSGGEREIQRTMLELLNQLDGFDSRGDVKVIMATNRIETLDPALIRPGRIDRKIEF 353
Query: 122 PLPDRRQKRLVFSTITAKMNLSDEVDLEDYVARPDRISGADINAICQEV-IMA 173
PLPD + K+ +F T++M L+D+V L+D + D +SGADI AIC E +MA
Sbjct: 354 PLPDEKTKKRIFQIHTSRMTLADDVTLDDLIMAKDDLSGADIKAICTEAGLMA 406
Score = 305 (112.4 bits), Expect = 3.5e-27, P = 3.5e-27
Identities = 61/111 (54%), Positives = 81/111 (72%)
Query: 222 GNLQVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLVFSTITAKMNLSDEVDLED 281
G+++VIMATNR +TLDPAL+RPGR+DRKIEFPLPD + K+ +F T++M L+D+V L+D
Sbjct: 323 GDVKVIMATNRIETLDPALIRPGRIDRKIEFPLPDEKTKKRIFQIHTSRMTLADDVTLDD 382
Query: 282 YVARPDRISGADINAICQEAGMHAVRENRYIVLPKDFEKG-----YKKCAG 327
+ D +SGADI AIC EAG+ A+RE R V +DF+K YKK G
Sbjct: 383 LIMAKDDLSGADIKAICTEAGLMALRERRMKVTNEDFKKSKENVLYKKQEG 433
Score = 175 (66.7 bits), Expect = 3.2e-12, Sum P(2) = 3.2e-12
Identities = 34/61 (55%), Positives = 46/61 (75%)
Query: 169 EVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLVFSTITAKMNFMLNIGNLQVIM 228
+VIMATNR +TLDPAL+RPGR+DRKIEFPLPD + K+ +F T++M ++ +IM
Sbjct: 326 KVIMATNRIETLDPALIRPGRIDRKIEFPLPDEKTKKRIFQIHTSRMTLADDVTLDDLIM 385
Query: 229 A 229
A
Sbjct: 386 A 386
Score = 55 (24.4 bits), Expect = 6.8e-51, Sum P(2) = 6.8e-51
Identities = 15/35 (42%), Positives = 20/35 (57%)
Query: 326 AGMHAVRENRYIVLPKDFEKGYKNNT-KKDESEHE 359
AG+ A+RE R V +DF+K +N KK E E
Sbjct: 402 AGLMALRERRMKVTNEDFKKSKENVLYKKQEGTPE 436
>UNIPROTKB|B4DR63 [details] [associations]
symbol:PSMC1 "cDNA FLJ58247, highly similar to 26S protease
regulatory subunit 4" species:9606 "Homo sapiens" [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0006508 "proteolysis" evidence=IEA] [GO:0008233
"peptidase activity" evidence=IEA] [GO:0022624 "proteasome
accessory complex" evidence=IEA] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005730 "nucleolus" evidence=IDA] [GO:0005737
"cytoplasm" evidence=IDA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737
GO:GO:0006508 GO:GO:0030163 GO:GO:0017111 GO:GO:0008233
EMBL:AL161662 TIGRFAMs:TIGR01242 HOVERGEN:HBG000109
UniGene:Hs.356654 HGNC:HGNC:9547 EMBL:AL355074 EMBL:AK299121
IPI:IPI01015427 SMR:B4DR63 STRING:B4DR63 Ensembl:ENST00000543772
Uniprot:B4DR63
Length = 367
Score = 491 (177.9 bits), Expect = 6.8e-51, Sum P(2) = 6.8e-51
Identities = 92/173 (53%), Positives = 127/173 (73%)
Query: 2 LLCTSFDTELVTAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENSPXXXXXXXXXXXXTK 61
LL + + F+RVVGSE +QKYLG+GP++VR++FR+A+E++P TK
Sbjct: 161 LLAKAVANQTSATFLRVVGSELIQKYLGDGPKLVRELFRVAEEHAPSIVFIDEIDAIGTK 220
Query: 62 RFDAQTGADREVQRILLELLNQMDGFDQTTNVKVIMATNRADTLDPALLRPGRLDRKIEF 121
R+D+ +G +RE+QR +LELLNQ+DGFD +VKVIMATNR +TLDPAL+RPGR+DRKIEF
Sbjct: 221 RYDSNSGGEREIQRTMLELLNQLDGFDSRGDVKVIMATNRIETLDPALIRPGRIDRKIEF 280
Query: 122 PLPDRRQKRLVFSTITAKMNLSDEVDLEDYVARPDRISGADINAICQEV-IMA 173
PLPD + K+ +F T++M L+D+V L+D + D +SGADI AIC E +MA
Sbjct: 281 PLPDEKTKKRIFQIHTSRMTLADDVTLDDLIMAKDDLSGADIKAICTEAGLMA 333
Score = 305 (112.4 bits), Expect = 3.5e-27, P = 3.5e-27
Identities = 61/111 (54%), Positives = 81/111 (72%)
Query: 222 GNLQVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLVFSTITAKMNLSDEVDLED 281
G+++VIMATNR +TLDPAL+RPGR+DRKIEFPLPD + K+ +F T++M L+D+V L+D
Sbjct: 250 GDVKVIMATNRIETLDPALIRPGRIDRKIEFPLPDEKTKKRIFQIHTSRMTLADDVTLDD 309
Query: 282 YVARPDRISGADINAICQEAGMHAVRENRYIVLPKDFEKG-----YKKCAG 327
+ D +SGADI AIC EAG+ A+RE R V +DF+K YKK G
Sbjct: 310 LIMAKDDLSGADIKAICTEAGLMALRERRMKVTNEDFKKSKENVLYKKQEG 360
Score = 175 (66.7 bits), Expect = 1.3e-12, Sum P(2) = 1.3e-12
Identities = 34/61 (55%), Positives = 46/61 (75%)
Query: 169 EVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLVFSTITAKMNFMLNIGNLQVIM 228
+VIMATNR +TLDPAL+RPGR+DRKIEFPLPD + K+ +F T++M ++ +IM
Sbjct: 253 KVIMATNRIETLDPALIRPGRIDRKIEFPLPDEKTKKRIFQIHTSRMTLADDVTLDDLIM 312
Query: 229 A 229
A
Sbjct: 313 A 313
Score = 55 (24.4 bits), Expect = 6.8e-51, Sum P(2) = 6.8e-51
Identities = 15/35 (42%), Positives = 20/35 (57%)
Query: 326 AGMHAVRENRYIVLPKDFEKGYKNNT-KKDESEHE 359
AG+ A+RE R V +DF+K +N KK E E
Sbjct: 329 AGLMALRERRMKVTNEDFKKSKENVLYKKQEGTPE 363
>UNIPROTKB|P62191 [details] [associations]
symbol:PSMC1 "26S protease regulatory subunit 4"
species:9606 "Homo sapiens" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0022624 "proteasome accessory complex" evidence=ISS]
[GO:0016887 "ATPase activity" evidence=ISS] [GO:0000502 "proteasome
complex" evidence=NAS] [GO:0000075 "cell cycle checkpoint"
evidence=TAS] [GO:0000082 "G1/S transition of mitotic cell cycle"
evidence=TAS] [GO:0000084 "S phase of mitotic cell cycle"
evidence=TAS] [GO:0000209 "protein polyubiquitination"
evidence=TAS] [GO:0000216 "M/G1 transition of mitotic cell cycle"
evidence=TAS] [GO:0000278 "mitotic cell cycle" evidence=TAS]
[GO:0002474 "antigen processing and presentation of peptide antigen
via MHC class I" evidence=TAS] [GO:0002479 "antigen processing and
presentation of exogenous peptide antigen via MHC class I,
TAP-dependent" evidence=TAS] [GO:0005654 "nucleoplasm"
evidence=TAS] [GO:0005829 "cytosol" evidence=TAS] [GO:0006521
"regulation of cellular amino acid metabolic process" evidence=TAS]
[GO:0006915 "apoptotic process" evidence=TAS] [GO:0006977 "DNA
damage response, signal transduction by p53 class mediator
resulting in cell cycle arrest" evidence=TAS] [GO:0010467 "gene
expression" evidence=TAS] [GO:0016032 "viral reproduction"
evidence=TAS] [GO:0016070 "RNA metabolic process" evidence=TAS]
[GO:0016071 "mRNA metabolic process" evidence=TAS] [GO:0031145
"anaphase-promoting complex-dependent proteasomal
ubiquitin-dependent protein catabolic process" evidence=TAS]
[GO:0034641 "cellular nitrogen compound metabolic process"
evidence=TAS] [GO:0042590 "antigen processing and presentation of
exogenous peptide antigen via MHC class I" evidence=TAS]
[GO:0042981 "regulation of apoptotic process" evidence=TAS]
[GO:0044281 "small molecule metabolic process" evidence=TAS]
[GO:0051436 "negative regulation of ubiquitin-protein ligase
activity involved in mitotic cell cycle" evidence=TAS] [GO:0051437
"positive regulation of ubiquitin-protein ligase activity involved
in mitotic cell cycle" evidence=TAS] [GO:0051439 "regulation of
ubiquitin-protein ligase activity involved in mitotic cell cycle"
evidence=TAS] [GO:0005515 "protein binding" evidence=IPI]
[GO:0006200 "ATP catabolic process" evidence=ISS] [GO:0005634
"nucleus" evidence=IDA] [GO:0005730 "nucleolus" evidence=IDA]
[GO:0005737 "cytoplasm" evidence=IDA] Reactome:REACT_13505
Reactome:REACT_578 Reactome:REACT_71 Reactome:REACT_21257
Reactome:REACT_6850 Reactome:REACT_111217 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005829
GO:GO:0005524 Reactome:REACT_111102 Reactome:REACT_116125
Reactome:REACT_6900 GO:GO:0006915 GO:GO:0010467 GO:GO:0016071
Reactome:REACT_115566 GO:GO:0005654 GO:GO:0002479 GO:GO:0016032
Reactome:REACT_21300 GO:GO:0006977 GO:GO:0042981 GO:GO:0000082
GO:GO:0016887 GO:GO:0051436 GO:GO:0000216 GO:GO:0000209
GO:GO:0000084 GO:GO:0031145 GO:GO:0051437 GO:GO:0006521
Reactome:REACT_383 eggNOG:COG1222 TIGRFAMs:TIGR01242
HOVERGEN:HBG000109 GO:GO:0022624 HOGENOM:HOG000225143 KO:K03062
OMA:FIRNQER CTD:5700 OrthoDB:EOG4D7Z5Q EMBL:L02426 EMBL:CR457044
EMBL:BC000512 EMBL:BC016368 EMBL:BC073818 IPI:IPI00011126
PIR:A44468 RefSeq:NP_002793.2 UniGene:Hs.356654
ProteinModelPortal:P62191 SMR:P62191 IntAct:P62191
MINT:MINT-1141832 STRING:P62191 PhosphoSite:P62191 DMDM:49065817
PaxDb:P62191 PeptideAtlas:P62191 PRIDE:P62191 DNASU:5700
Ensembl:ENST00000261303 GeneID:5700 KEGG:hsa:5700 UCSC:uc001xyf.3
GeneCards:GC14P090722 H-InvDB:HIX0030744 HGNC:HGNC:9547
HPA:HPA000872 MIM:602706 neXtProt:NX_P62191 PharmGKB:PA33892
InParanoid:P62191 PhylomeDB:P62191 GenomeRNAi:5700 NextBio:22146
ArrayExpress:P62191 Bgee:P62191 CleanEx:HS_PSMC1
Genevestigator:P62191 GermOnline:ENSG00000100764 Uniprot:P62191
Length = 440
Score = 491 (177.9 bits), Expect = 6.8e-51, Sum P(2) = 6.8e-51
Identities = 92/173 (53%), Positives = 127/173 (73%)
Query: 2 LLCTSFDTELVTAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENSPXXXXXXXXXXXXTK 61
LL + + F+RVVGSE +QKYLG+GP++VR++FR+A+E++P TK
Sbjct: 234 LLAKAVANQTSATFLRVVGSELIQKYLGDGPKLVRELFRVAEEHAPSIVFIDEIDAIGTK 293
Query: 62 RFDAQTGADREVQRILLELLNQMDGFDQTTNVKVIMATNRADTLDPALLRPGRLDRKIEF 121
R+D+ +G +RE+QR +LELLNQ+DGFD +VKVIMATNR +TLDPAL+RPGR+DRKIEF
Sbjct: 294 RYDSNSGGEREIQRTMLELLNQLDGFDSRGDVKVIMATNRIETLDPALIRPGRIDRKIEF 353
Query: 122 PLPDRRQKRLVFSTITAKMNLSDEVDLEDYVARPDRISGADINAICQEV-IMA 173
PLPD + K+ +F T++M L+D+V L+D + D +SGADI AIC E +MA
Sbjct: 354 PLPDEKTKKRIFQIHTSRMTLADDVTLDDLIMAKDDLSGADIKAICTEAGLMA 406
Score = 305 (112.4 bits), Expect = 3.5e-27, P = 3.5e-27
Identities = 61/111 (54%), Positives = 81/111 (72%)
Query: 222 GNLQVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLVFSTITAKMNLSDEVDLED 281
G+++VIMATNR +TLDPAL+RPGR+DRKIEFPLPD + K+ +F T++M L+D+V L+D
Sbjct: 323 GDVKVIMATNRIETLDPALIRPGRIDRKIEFPLPDEKTKKRIFQIHTSRMTLADDVTLDD 382
Query: 282 YVARPDRISGADINAICQEAGMHAVRENRYIVLPKDFEKG-----YKKCAG 327
+ D +SGADI AIC EAG+ A+RE R V +DF+K YKK G
Sbjct: 383 LIMAKDDLSGADIKAICTEAGLMALRERRMKVTNEDFKKSKENVLYKKQEG 433
Score = 175 (66.7 bits), Expect = 3.2e-12, Sum P(2) = 3.2e-12
Identities = 34/61 (55%), Positives = 46/61 (75%)
Query: 169 EVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLVFSTITAKMNFMLNIGNLQVIM 228
+VIMATNR +TLDPAL+RPGR+DRKIEFPLPD + K+ +F T++M ++ +IM
Sbjct: 326 KVIMATNRIETLDPALIRPGRIDRKIEFPLPDEKTKKRIFQIHTSRMTLADDVTLDDLIM 385
Query: 229 A 229
A
Sbjct: 386 A 386
Score = 55 (24.4 bits), Expect = 6.8e-51, Sum P(2) = 6.8e-51
Identities = 15/35 (42%), Positives = 20/35 (57%)
Query: 326 AGMHAVRENRYIVLPKDFEKGYKNNT-KKDESEHE 359
AG+ A+RE R V +DF+K +N KK E E
Sbjct: 402 AGLMALRERRMKVTNEDFKKSKENVLYKKQEGTPE 436
>UNIPROTKB|F2Z5J1 [details] [associations]
symbol:PSMC1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0022624 "proteasome accessory complex" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0030163
GO:GO:0017111 TIGRFAMs:TIGR01242 KO:K03062 OMA:FIRNQER
GeneTree:ENSGT00550000074818 CTD:5700 EMBL:CT737375
RefSeq:NP_001231080.1 UniGene:Ssc.1911 ProteinModelPortal:F2Z5J1
SMR:F2Z5J1 PRIDE:F2Z5J1 Ensembl:ENSSSCT00000002703 GeneID:100155274
KEGG:ssc:100155274 Uniprot:F2Z5J1
Length = 440
Score = 491 (177.9 bits), Expect = 6.8e-51, Sum P(2) = 6.8e-51
Identities = 92/173 (53%), Positives = 127/173 (73%)
Query: 2 LLCTSFDTELVTAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENSPXXXXXXXXXXXXTK 61
LL + + F+RVVGSE +QKYLG+GP++VR++FR+A+E++P TK
Sbjct: 234 LLAKAVANQTSATFLRVVGSELIQKYLGDGPKLVRELFRVAEEHAPSIVFIDEIDAIGTK 293
Query: 62 RFDAQTGADREVQRILLELLNQMDGFDQTTNVKVIMATNRADTLDPALLRPGRLDRKIEF 121
R+D+ +G +RE+QR +LELLNQ+DGFD +VKVIMATNR +TLDPAL+RPGR+DRKIEF
Sbjct: 294 RYDSNSGGEREIQRTMLELLNQLDGFDSRGDVKVIMATNRIETLDPALIRPGRIDRKIEF 353
Query: 122 PLPDRRQKRLVFSTITAKMNLSDEVDLEDYVARPDRISGADINAICQEV-IMA 173
PLPD + K+ +F T++M L+D+V L+D + D +SGADI AIC E +MA
Sbjct: 354 PLPDEKTKKRIFQIHTSRMTLADDVTLDDLIMAKDDLSGADIKAICTEAGLMA 406
Score = 305 (112.4 bits), Expect = 3.5e-27, P = 3.5e-27
Identities = 61/111 (54%), Positives = 81/111 (72%)
Query: 222 GNLQVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLVFSTITAKMNLSDEVDLED 281
G+++VIMATNR +TLDPAL+RPGR+DRKIEFPLPD + K+ +F T++M L+D+V L+D
Sbjct: 323 GDVKVIMATNRIETLDPALIRPGRIDRKIEFPLPDEKTKKRIFQIHTSRMTLADDVTLDD 382
Query: 282 YVARPDRISGADINAICQEAGMHAVRENRYIVLPKDFEKG-----YKKCAG 327
+ D +SGADI AIC EAG+ A+RE R V +DF+K YKK G
Sbjct: 383 LIMAKDDLSGADIKAICTEAGLMALRERRMKVTNEDFKKSKENVLYKKQEG 433
Score = 175 (66.7 bits), Expect = 3.2e-12, Sum P(2) = 3.2e-12
Identities = 34/61 (55%), Positives = 46/61 (75%)
Query: 169 EVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLVFSTITAKMNFMLNIGNLQVIM 228
+VIMATNR +TLDPAL+RPGR+DRKIEFPLPD + K+ +F T++M ++ +IM
Sbjct: 326 KVIMATNRIETLDPALIRPGRIDRKIEFPLPDEKTKKRIFQIHTSRMTLADDVTLDDLIM 385
Query: 229 A 229
A
Sbjct: 386 A 386
Score = 55 (24.4 bits), Expect = 6.8e-51, Sum P(2) = 6.8e-51
Identities = 15/35 (42%), Positives = 20/35 (57%)
Query: 326 AGMHAVRENRYIVLPKDFEKGYKNNT-KKDESEHE 359
AG+ A+RE R V +DF+K +N KK E E
Sbjct: 402 AGLMALRERRMKVTNEDFKKSKENVLYKKQEGTPE 436
>MGI|MGI:106054 [details] [associations]
symbol:Psmc1 "protease (prosome, macropain) 26S subunit,
ATPase 1" species:10090 "Mus musculus" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0000502 "proteasome complex"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=ISO] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0017025
"TBP-class protein binding" evidence=ISO] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0022624
"proteasome accessory complex" evidence=IDA] [GO:0030163 "protein
catabolic process" evidence=IEA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 MGI:MGI:106054
GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0030163
GO:GO:0017111 eggNOG:COG1222 TIGRFAMs:TIGR01242 HOVERGEN:HBG000109
GO:GO:0022624 HOGENOM:HOG000225143 KO:K03062 OMA:FIRNQER CTD:5700
OrthoDB:EOG4D7Z5Q EMBL:U39302 EMBL:BC003860 IPI:IPI00133428
RefSeq:NP_032973.1 UniGene:Mm.157105 ProteinModelPortal:P62192
SMR:P62192 IntAct:P62192 STRING:P62192 PhosphoSite:P62192
REPRODUCTION-2DPAGE:IPI00133428 PaxDb:P62192 PRIDE:P62192
Ensembl:ENSMUST00000021595 GeneID:19179 KEGG:mmu:19179
InParanoid:P62192 NextBio:295866 Bgee:P62192 Genevestigator:P62192
GermOnline:ENSMUSG00000021178 Uniprot:P62192
Length = 440
Score = 491 (177.9 bits), Expect = 6.8e-51, Sum P(2) = 6.8e-51
Identities = 92/173 (53%), Positives = 127/173 (73%)
Query: 2 LLCTSFDTELVTAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENSPXXXXXXXXXXXXTK 61
LL + + F+RVVGSE +QKYLG+GP++VR++FR+A+E++P TK
Sbjct: 234 LLAKAVANQTSATFLRVVGSELIQKYLGDGPKLVRELFRVAEEHAPSIVFIDEIDAIGTK 293
Query: 62 RFDAQTGADREVQRILLELLNQMDGFDQTTNVKVIMATNRADTLDPALLRPGRLDRKIEF 121
R+D+ +G +RE+QR +LELLNQ+DGFD +VKVIMATNR +TLDPAL+RPGR+DRKIEF
Sbjct: 294 RYDSNSGGEREIQRTMLELLNQLDGFDSRGDVKVIMATNRIETLDPALIRPGRIDRKIEF 353
Query: 122 PLPDRRQKRLVFSTITAKMNLSDEVDLEDYVARPDRISGADINAICQEV-IMA 173
PLPD + K+ +F T++M L+D+V L+D + D +SGADI AIC E +MA
Sbjct: 354 PLPDEKTKKRIFQIHTSRMTLADDVTLDDLIMAKDDLSGADIKAICTEAGLMA 406
Score = 305 (112.4 bits), Expect = 3.5e-27, P = 3.5e-27
Identities = 61/111 (54%), Positives = 81/111 (72%)
Query: 222 GNLQVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLVFSTITAKMNLSDEVDLED 281
G+++VIMATNR +TLDPAL+RPGR+DRKIEFPLPD + K+ +F T++M L+D+V L+D
Sbjct: 323 GDVKVIMATNRIETLDPALIRPGRIDRKIEFPLPDEKTKKRIFQIHTSRMTLADDVTLDD 382
Query: 282 YVARPDRISGADINAICQEAGMHAVRENRYIVLPKDFEKG-----YKKCAG 327
+ D +SGADI AIC EAG+ A+RE R V +DF+K YKK G
Sbjct: 383 LIMAKDDLSGADIKAICTEAGLMALRERRMKVTNEDFKKSKENVLYKKQEG 433
Score = 175 (66.7 bits), Expect = 3.2e-12, Sum P(2) = 3.2e-12
Identities = 34/61 (55%), Positives = 46/61 (75%)
Query: 169 EVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLVFSTITAKMNFMLNIGNLQVIM 228
+VIMATNR +TLDPAL+RPGR+DRKIEFPLPD + K+ +F T++M ++ +IM
Sbjct: 326 KVIMATNRIETLDPALIRPGRIDRKIEFPLPDEKTKKRIFQIHTSRMTLADDVTLDDLIM 385
Query: 229 A 229
A
Sbjct: 386 A 386
Score = 55 (24.4 bits), Expect = 6.8e-51, Sum P(2) = 6.8e-51
Identities = 15/35 (42%), Positives = 20/35 (57%)
Query: 326 AGMHAVRENRYIVLPKDFEKGYKNNT-KKDESEHE 359
AG+ A+RE R V +DF+K +N KK E E
Sbjct: 402 AGLMALRERRMKVTNEDFKKSKENVLYKKQEGTPE 436
>RGD|621097 [details] [associations]
symbol:Psmc1 "proteasome (prosome, macropain) 26S subunit,
ATPase, 1" species:10116 "Rattus norvegicus" [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005575 "cellular_component"
evidence=ND] [GO:0005634 "nucleus" evidence=ISO;IDA] [GO:0005737
"cytoplasm" evidence=IEA;ISO] [GO:0006200 "ATP catabolic process"
evidence=TAS] [GO:0008150 "biological_process" evidence=ND]
[GO:0016887 "ATPase activity" evidence=TAS] [GO:0017025 "TBP-class
protein binding" evidence=IPI] [GO:0022624 "proteasome accessory
complex" evidence=ISO;ISS] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0005730 "nucleolus" evidence=ISO]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
RGD:621097 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0016887
GO:GO:0030163 eggNOG:COG1222 TIGRFAMs:TIGR01242 HOVERGEN:HBG000109
GO:GO:0022624 HOGENOM:HOG000225143 KO:K03062
GeneTree:ENSGT00550000074818 CTD:5700 OrthoDB:EOG4D7Z5Q EMBL:D50696
EMBL:BC063157 IPI:IPI00211733 RefSeq:NP_476464.1 UniGene:Rn.10526
ProteinModelPortal:P62193 SMR:P62193 IntAct:P62193 STRING:P62193
PRIDE:P62193 Ensembl:ENSRNOT00000005329 GeneID:117263
KEGG:rno:117263 UCSC:RGD:621097 InParanoid:P62193 NextBio:620148
Genevestigator:P62193 GermOnline:ENSRNOG00000003951 Uniprot:P62193
Length = 440
Score = 491 (177.9 bits), Expect = 6.8e-51, Sum P(2) = 6.8e-51
Identities = 92/173 (53%), Positives = 127/173 (73%)
Query: 2 LLCTSFDTELVTAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENSPXXXXXXXXXXXXTK 61
LL + + F+RVVGSE +QKYLG+GP++VR++FR+A+E++P TK
Sbjct: 234 LLAKAVANQTSATFLRVVGSELIQKYLGDGPKLVRELFRVAEEHAPSIVFIDEIDAIGTK 293
Query: 62 RFDAQTGADREVQRILLELLNQMDGFDQTTNVKVIMATNRADTLDPALLRPGRLDRKIEF 121
R+D+ +G +RE+QR +LELLNQ+DGFD +VKVIMATNR +TLDPAL+RPGR+DRKIEF
Sbjct: 294 RYDSNSGGEREIQRTMLELLNQLDGFDSRGDVKVIMATNRIETLDPALIRPGRIDRKIEF 353
Query: 122 PLPDRRQKRLVFSTITAKMNLSDEVDLEDYVARPDRISGADINAICQEV-IMA 173
PLPD + K+ +F T++M L+D+V L+D + D +SGADI AIC E +MA
Sbjct: 354 PLPDEKTKKRIFQIHTSRMTLADDVTLDDLIMAKDDLSGADIKAICTEAGLMA 406
Score = 305 (112.4 bits), Expect = 3.5e-27, P = 3.5e-27
Identities = 61/111 (54%), Positives = 81/111 (72%)
Query: 222 GNLQVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLVFSTITAKMNLSDEVDLED 281
G+++VIMATNR +TLDPAL+RPGR+DRKIEFPLPD + K+ +F T++M L+D+V L+D
Sbjct: 323 GDVKVIMATNRIETLDPALIRPGRIDRKIEFPLPDEKTKKRIFQIHTSRMTLADDVTLDD 382
Query: 282 YVARPDRISGADINAICQEAGMHAVRENRYIVLPKDFEKG-----YKKCAG 327
+ D +SGADI AIC EAG+ A+RE R V +DF+K YKK G
Sbjct: 383 LIMAKDDLSGADIKAICTEAGLMALRERRMKVTNEDFKKSKENVLYKKQEG 433
Score = 175 (66.7 bits), Expect = 3.2e-12, Sum P(2) = 3.2e-12
Identities = 34/61 (55%), Positives = 46/61 (75%)
Query: 169 EVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLVFSTITAKMNFMLNIGNLQVIM 228
+VIMATNR +TLDPAL+RPGR+DRKIEFPLPD + K+ +F T++M ++ +IM
Sbjct: 326 KVIMATNRIETLDPALIRPGRIDRKIEFPLPDEKTKKRIFQIHTSRMTLADDVTLDDLIM 385
Query: 229 A 229
A
Sbjct: 386 A 386
Score = 55 (24.4 bits), Expect = 6.8e-51, Sum P(2) = 6.8e-51
Identities = 15/35 (42%), Positives = 20/35 (57%)
Query: 326 AGMHAVRENRYIVLPKDFEKGYKNNT-KKDESEHE 359
AG+ A+RE R V +DF+K +N KK E E
Sbjct: 402 AGLMALRERRMKVTNEDFKKSKENVLYKKQEGTPE 436
>ZFIN|ZDB-GENE-030131-8730 [details] [associations]
symbol:psmc1a "proteasome (prosome, macropain) 26S
subunit, ATPase, 1a" species:7955 "Danio rerio" [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] [GO:0000502 "proteasome complex"
evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 ZFIN:ZDB-GENE-030131-8730 GO:GO:0005524 GO:GO:0005737
GO:GO:0030163 GO:GO:0000502 GO:GO:0017111 HSSP:P43773
TIGRFAMs:TIGR01242 HOVERGEN:HBG000109 KO:K03062 EMBL:BC049471
IPI:IPI00500900 RefSeq:NP_956327.1 UniGene:Dr.76288
ProteinModelPortal:Q7ZWD1 STRING:Q7ZWD1 GeneID:336786
KEGG:dre:336786 CTD:336786 InParanoid:Q7ZWD1 NextBio:20811903
ArrayExpress:Q7ZWD1 Uniprot:Q7ZWD1
Length = 440
Score = 491 (177.9 bits), Expect = 6.8e-51, Sum P(2) = 6.8e-51
Identities = 92/173 (53%), Positives = 127/173 (73%)
Query: 2 LLCTSFDTELVTAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENSPXXXXXXXXXXXXTK 61
LL + + F+RVVGSE +QKYLG+GP++VR++FR+A+E++P TK
Sbjct: 234 LLAKAVANQTSATFLRVVGSELIQKYLGDGPKLVRELFRVAEEHAPSIVFIDEIDAIGTK 293
Query: 62 RFDAQTGADREVQRILLELLNQMDGFDQTTNVKVIMATNRADTLDPALLRPGRLDRKIEF 121
R+D+ +G +RE+QR +LELLNQ+DGFD +VKVIMATNR +TLDPAL+RPGR+DRKIEF
Sbjct: 294 RYDSNSGGEREIQRTMLELLNQLDGFDSRGDVKVIMATNRIETLDPALIRPGRIDRKIEF 353
Query: 122 PLPDRRQKRLVFSTITAKMNLSDEVDLEDYVARPDRISGADINAICQEV-IMA 173
PLPD + KR +F T++M ++D+V L+D + D +SGADI AIC E +MA
Sbjct: 354 PLPDEKTKRRIFQIHTSRMTVADDVTLDDLILAKDDLSGADIKAICTEAGLMA 406
Score = 305 (112.4 bits), Expect = 3.5e-27, P = 3.5e-27
Identities = 61/111 (54%), Positives = 81/111 (72%)
Query: 222 GNLQVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLVFSTITAKMNLSDEVDLED 281
G+++VIMATNR +TLDPAL+RPGR+DRKIEFPLPD + KR +F T++M ++D+V L+D
Sbjct: 323 GDVKVIMATNRIETLDPALIRPGRIDRKIEFPLPDEKTKRRIFQIHTSRMTVADDVTLDD 382
Query: 282 YVARPDRISGADINAICQEAGMHAVRENRYIVLPKDFEKG-----YKKCAG 327
+ D +SGADI AIC EAG+ A+RE R V +DF+K YKK G
Sbjct: 383 LILAKDDLSGADIKAICTEAGLMALRERRMKVTNEDFKKSKENVLYKKQEG 433
Score = 174 (66.3 bits), Expect = 4.2e-12, Sum P(2) = 4.2e-12
Identities = 32/47 (68%), Positives = 40/47 (85%)
Query: 169 EVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLVFSTITAKM 215
+VIMATNR +TLDPAL+RPGR+DRKIEFPLPD + KR +F T++M
Sbjct: 326 KVIMATNRIETLDPALIRPGRIDRKIEFPLPDEKTKRRIFQIHTSRM 372
Score = 55 (24.4 bits), Expect = 6.8e-51, Sum P(2) = 6.8e-51
Identities = 15/35 (42%), Positives = 20/35 (57%)
Query: 326 AGMHAVRENRYIVLPKDFEKGYKNNT-KKDESEHE 359
AG+ A+RE R V +DF+K +N KK E E
Sbjct: 402 AGLMALRERRMKVTNEDFKKSKENVLYKKQEGTPE 436
>ZFIN|ZDB-GENE-040625-69 [details] [associations]
symbol:psmc1b "proteasome (prosome, macropain) 26S
subunit, ATPase, 1b" species:7955 "Danio rerio" [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0000502 "proteasome complex"
evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 ZFIN:ZDB-GENE-040625-69 GO:GO:0005524 GO:GO:0005737
GO:GO:0030163 GO:GO:0000502 GO:GO:0017111 eggNOG:COG1222
TIGRFAMs:TIGR01242 HOVERGEN:HBG000109 HOGENOM:HOG000225143
KO:K03062 GeneTree:ENSGT00550000074818 EMBL:AL935145 EMBL:BC071538
IPI:IPI00495318 RefSeq:NP_001002091.1 UniGene:Dr.1187 STRING:Q6IQ72
Ensembl:ENSDART00000063950 GeneID:415181 KEGG:dre:415181 CTD:415181
InParanoid:Q6IQ72 NextBio:20818851 Uniprot:Q6IQ72
Length = 440
Score = 488 (176.8 bits), Expect = 1.4e-50, Sum P(2) = 1.4e-50
Identities = 91/173 (52%), Positives = 127/173 (73%)
Query: 2 LLCTSFDTELVTAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENSPXXXXXXXXXXXXTK 61
LL + + F+RVVGSE +QKYLG+GP++VR++FR+A+E++P TK
Sbjct: 234 LLAKAVANQTSATFLRVVGSELIQKYLGDGPKLVRELFRVAEEHAPSIVFIDEIDAIGTK 293
Query: 62 RFDAQTGADREVQRILLELLNQMDGFDQTTNVKVIMATNRADTLDPALLRPGRLDRKIEF 121
R+D+ +G +RE+QR +LELLNQ+DGFD +VKVIMATNR +TLDPAL+RPGR+DRKIEF
Sbjct: 294 RYDSNSGGEREIQRTMLELLNQLDGFDSRGDVKVIMATNRIETLDPALIRPGRIDRKIEF 353
Query: 122 PLPDRRQKRLVFSTITAKMNLSDEVDLEDYVARPDRISGADINAICQEV-IMA 173
PLPD + KR +F T++M ++++V L+D + D +SGADI AIC E +MA
Sbjct: 354 PLPDEKTKRRIFQIHTSRMTVAEDVSLDDLILAKDDLSGADIKAICTEAGLMA 406
Score = 302 (111.4 bits), Expect = 7.3e-27, P = 7.3e-27
Identities = 60/111 (54%), Positives = 81/111 (72%)
Query: 222 GNLQVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLVFSTITAKMNLSDEVDLED 281
G+++VIMATNR +TLDPAL+RPGR+DRKIEFPLPD + KR +F T++M ++++V L+D
Sbjct: 323 GDVKVIMATNRIETLDPALIRPGRIDRKIEFPLPDEKTKRRIFQIHTSRMTVAEDVSLDD 382
Query: 282 YVARPDRISGADINAICQEAGMHAVRENRYIVLPKDFEKG-----YKKCAG 327
+ D +SGADI AIC EAG+ A+RE R V +DF+K YKK G
Sbjct: 383 LILAKDDLSGADIKAICTEAGLMALRERRMKVTNEDFKKSKENVLYKKQEG 433
Score = 177 (67.4 bits), Expect = 1.9e-12, Sum P(2) = 1.9e-12
Identities = 34/61 (55%), Positives = 46/61 (75%)
Query: 169 EVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLVFSTITAKMNFMLNIGNLQVIM 228
+VIMATNR +TLDPAL+RPGR+DRKIEFPLPD + KR +F T++M ++ +I+
Sbjct: 326 KVIMATNRIETLDPALIRPGRIDRKIEFPLPDEKTKRRIFQIHTSRMTVAEDVSLDDLIL 385
Query: 229 A 229
A
Sbjct: 386 A 386
Score = 55 (24.4 bits), Expect = 1.4e-50, Sum P(2) = 1.4e-50
Identities = 15/35 (42%), Positives = 20/35 (57%)
Query: 326 AGMHAVRENRYIVLPKDFEKGYKNNT-KKDESEHE 359
AG+ A+RE R V +DF+K +N KK E E
Sbjct: 402 AGLMALRERRMKVTNEDFKKSKENVLYKKQEGTPE 436
>UNIPROTKB|F1NSP7 [details] [associations]
symbol:PSMC1 "26S protease regulatory subunit 4"
species:9031 "Gallus gallus" [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0022624 "proteasome accessory complex" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0030163
GO:GO:0017111 TIGRFAMs:TIGR01242 OMA:FIRNQER
GeneTree:ENSGT00550000074818 IPI:IPI00585304 EMBL:AADN02003628
EMBL:AADN02003629 Ensembl:ENSGALT00000017367 ArrayExpress:F1NSP7
Uniprot:F1NSP7
Length = 439
Score = 487 (176.5 bits), Expect = 1.8e-50, Sum P(2) = 1.8e-50
Identities = 91/173 (52%), Positives = 127/173 (73%)
Query: 2 LLCTSFDTELVTAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENSPXXXXXXXXXXXXTK 61
LL + + F+RVVGSE +QKYLG+GP++VR++FR+A+E++P TK
Sbjct: 233 LLAKAVANQTSATFLRVVGSELIQKYLGDGPKLVRELFRVAEEHAPSIVFIDEIDAIGTK 292
Query: 62 RFDAQTGADREVQRILLELLNQMDGFDQTTNVKVIMATNRADTLDPALLRPGRLDRKIEF 121
R+D+ +G +RE+QR +LELLNQ+DGFD +VKVIMATNR +TLDPAL+RPGR+DRKIEF
Sbjct: 293 RYDSNSGGEREIQRTMLELLNQLDGFDSRGDVKVIMATNRIETLDPALIRPGRIDRKIEF 352
Query: 122 PLPDRRQKRLVFSTITAKMNLSDEVDLEDYVARPDRISGADINAICQEV-IMA 173
PLPD + K+ +F T++M L+D+V L++ + D +SGADI AIC E +MA
Sbjct: 353 PLPDEKTKKRIFQIHTSRMTLADDVTLDELIMAKDDLSGADIKAICTEAGLMA 405
Score = 301 (111.0 bits), Expect = 9.4e-27, P = 9.4e-27
Identities = 60/111 (54%), Positives = 81/111 (72%)
Query: 222 GNLQVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLVFSTITAKMNLSDEVDLED 281
G+++VIMATNR +TLDPAL+RPGR+DRKIEFPLPD + K+ +F T++M L+D+V L++
Sbjct: 322 GDVKVIMATNRIETLDPALIRPGRIDRKIEFPLPDEKTKKRIFQIHTSRMTLADDVTLDE 381
Query: 282 YVARPDRISGADINAICQEAGMHAVRENRYIVLPKDFEKG-----YKKCAG 327
+ D +SGADI AIC EAG+ A+RE R V +DF+K YKK G
Sbjct: 382 LIMAKDDLSGADIKAICTEAGLMALRERRMKVTNEDFKKSKENVLYKKQEG 432
Score = 177 (67.4 bits), Expect = 1.8e-12, Sum P(2) = 1.8e-12
Identities = 34/61 (55%), Positives = 47/61 (77%)
Query: 169 EVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLVFSTITAKMNFMLNIGNLQVIM 228
+VIMATNR +TLDPAL+RPGR+DRKIEFPLPD + K+ +F T++M ++ ++IM
Sbjct: 325 KVIMATNRIETLDPALIRPGRIDRKIEFPLPDEKTKKRIFQIHTSRMTLADDVTLDELIM 384
Query: 229 A 229
A
Sbjct: 385 A 385
Score = 55 (24.4 bits), Expect = 1.8e-50, Sum P(2) = 1.8e-50
Identities = 15/35 (42%), Positives = 20/35 (57%)
Query: 326 AGMHAVRENRYIVLPKDFEKGYKNNT-KKDESEHE 359
AG+ A+RE R V +DF+K +N KK E E
Sbjct: 401 AGLMALRERRMKVTNEDFKKSKENVLYKKQEGTPE 435
>UNIPROTKB|F1NTZ4 [details] [associations]
symbol:PSMC1 "26S protease regulatory subunit 4"
species:9031 "Gallus gallus" [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0022624 "proteasome accessory complex" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0030163
GO:GO:0017111 TIGRFAMs:TIGR01242 OMA:FIRNQER
GeneTree:ENSGT00550000074818 EMBL:AADN02003628 EMBL:AADN02003629
IPI:IPI00821206 Ensembl:ENSGALT00000037629 ArrayExpress:F1NTZ4
Uniprot:F1NTZ4
Length = 438
Score = 487 (176.5 bits), Expect = 1.8e-50, Sum P(2) = 1.8e-50
Identities = 91/173 (52%), Positives = 127/173 (73%)
Query: 2 LLCTSFDTELVTAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENSPXXXXXXXXXXXXTK 61
LL + + F+RVVGSE +QKYLG+GP++VR++FR+A+E++P TK
Sbjct: 232 LLAKAVANQTSATFLRVVGSELIQKYLGDGPKLVRELFRVAEEHAPSIVFIDEIDAIGTK 291
Query: 62 RFDAQTGADREVQRILLELLNQMDGFDQTTNVKVIMATNRADTLDPALLRPGRLDRKIEF 121
R+D+ +G +RE+QR +LELLNQ+DGFD +VKVIMATNR +TLDPAL+RPGR+DRKIEF
Sbjct: 292 RYDSNSGGEREIQRTMLELLNQLDGFDSRGDVKVIMATNRIETLDPALIRPGRIDRKIEF 351
Query: 122 PLPDRRQKRLVFSTITAKMNLSDEVDLEDYVARPDRISGADINAICQEV-IMA 173
PLPD + K+ +F T++M L+D+V L++ + D +SGADI AIC E +MA
Sbjct: 352 PLPDEKTKKRIFQIHTSRMTLADDVTLDELIMAKDDLSGADIKAICTEAGLMA 404
Score = 301 (111.0 bits), Expect = 9.4e-27, P = 9.4e-27
Identities = 60/111 (54%), Positives = 81/111 (72%)
Query: 222 GNLQVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLVFSTITAKMNLSDEVDLED 281
G+++VIMATNR +TLDPAL+RPGR+DRKIEFPLPD + K+ +F T++M L+D+V L++
Sbjct: 321 GDVKVIMATNRIETLDPALIRPGRIDRKIEFPLPDEKTKKRIFQIHTSRMTLADDVTLDE 380
Query: 282 YVARPDRISGADINAICQEAGMHAVRENRYIVLPKDFEKG-----YKKCAG 327
+ D +SGADI AIC EAG+ A+RE R V +DF+K YKK G
Sbjct: 381 LIMAKDDLSGADIKAICTEAGLMALRERRMKVTNEDFKKSKENVLYKKQEG 431
Score = 177 (67.4 bits), Expect = 1.8e-12, Sum P(2) = 1.8e-12
Identities = 34/61 (55%), Positives = 47/61 (77%)
Query: 169 EVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLVFSTITAKMNFMLNIGNLQVIM 228
+VIMATNR +TLDPAL+RPGR+DRKIEFPLPD + K+ +F T++M ++ ++IM
Sbjct: 324 KVIMATNRIETLDPALIRPGRIDRKIEFPLPDEKTKKRIFQIHTSRMTLADDVTLDELIM 383
Query: 229 A 229
A
Sbjct: 384 A 384
Score = 55 (24.4 bits), Expect = 1.8e-50, Sum P(2) = 1.8e-50
Identities = 15/35 (42%), Positives = 20/35 (57%)
Query: 326 AGMHAVRENRYIVLPKDFEKGYKNNT-KKDESEHE 359
AG+ A+RE R V +DF+K +N KK E E
Sbjct: 400 AGLMALRERRMKVTNEDFKKSKENVLYKKQEGTPE 434
>UNIPROTKB|Q90732 [details] [associations]
symbol:PSMC1 "26S protease regulatory subunit 4"
species:9031 "Gallus gallus" [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0022624 "proteasome accessory complex" evidence=ISS]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0030163
GO:GO:0017111 eggNOG:COG1222 TIGRFAMs:TIGR01242 HOVERGEN:HBG000109
GO:GO:0022624 HOGENOM:HOG000225143 KO:K03062 EMBL:U60187
IPI:IPI00585304 PIR:S74197 RefSeq:NP_990289.1 UniGene:Gga.1071
ProteinModelPortal:Q90732 STRING:Q90732 PRIDE:Q90732 GeneID:395804
KEGG:gga:395804 CTD:5700 InParanoid:Q90732 OrthoDB:EOG4D7Z5Q
NextBio:20815872 Uniprot:Q90732
Length = 440
Score = 486 (176.1 bits), Expect = 2.9e-50, Sum P(2) = 2.9e-50
Identities = 91/173 (52%), Positives = 126/173 (72%)
Query: 2 LLCTSFDTELVTAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENSPXXXXXXXXXXXXTK 61
LL + + F+RVVGSE +QKYLG+GP++VR++FR+A+E+ P TK
Sbjct: 234 LLAKAVANQTSATFLRVVGSELIQKYLGDGPKLVRELFRVAEEHGPSIVFIDEIDAIGTK 293
Query: 62 RFDAQTGADREVQRILLELLNQMDGFDQTTNVKVIMATNRADTLDPALLRPGRLDRKIEF 121
R+D+ +G +RE+QR +LELLNQ+DGFD +VKVIMATNR +TLDPAL+RPGR+DRKIEF
Sbjct: 294 RYDSNSGGEREIQRTMLELLNQLDGFDSRGDVKVIMATNRIETLDPALIRPGRIDRKIEF 353
Query: 122 PLPDRRQKRLVFSTITAKMNLSDEVDLEDYVARPDRISGADINAICQEV-IMA 173
PLPD + K+ +F T++M L+D+V L++ + D +SGADI AIC E +MA
Sbjct: 354 PLPDEKTKKRIFQIHTSRMTLADDVTLDELIMAKDDLSGADIKAICTEAGLMA 406
Score = 303 (111.7 bits), Expect = 5.7e-27, P = 5.7e-27
Identities = 60/111 (54%), Positives = 81/111 (72%)
Query: 222 GNLQVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLVFSTITAKMNLSDEVDLED 281
G+++VIMATNR +TLDPAL+RPGR+DRKIEFPLPD + K+ +F T++M L+D+V L++
Sbjct: 323 GDVKVIMATNRIETLDPALIRPGRIDRKIEFPLPDEKTKKRIFQIHTSRMTLADDVTLDE 382
Query: 282 YVARPDRISGADINAICQEAGMHAVRENRYIVLPKDFEKG-----YKKCAG 327
+ D +SGADI AIC EAG+ A+RE R V +DF+K YKK G
Sbjct: 383 LIMAKDDLSGADIKAICTEAGLMALRERRMKVTNEDFKKSKENFLYKKTEG 433
Score = 177 (67.4 bits), Expect = 2.4e-12, Sum P(2) = 2.4e-12
Identities = 34/61 (55%), Positives = 47/61 (77%)
Query: 169 EVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLVFSTITAKMNFMLNIGNLQVIM 228
+VIMATNR +TLDPAL+RPGR+DRKIEFPLPD + K+ +F T++M ++ ++IM
Sbjct: 326 KVIMATNRIETLDPALIRPGRIDRKIEFPLPDEKTKKRIFQIHTSRMTLADDVTLDELIM 385
Query: 229 A 229
A
Sbjct: 386 A 386
Score = 54 (24.1 bits), Expect = 2.9e-50, Sum P(2) = 2.9e-50
Identities = 15/35 (42%), Positives = 20/35 (57%)
Query: 326 AGMHAVRENRYIVLPKDFEKGYKNNT-KKDESEHE 359
AG+ A+RE R V +DF+K +N KK E E
Sbjct: 402 AGLMALRERRMKVTNEDFKKSKENFLYKKTEGTPE 436
>FB|FBgn0015282 [details] [associations]
symbol:Rpt2 "Regulatory particle triple-A ATPase 2"
species:7227 "Drosophila melanogaster" [GO:0006508 "proteolysis"
evidence=ISS;IDA;NAS] [GO:0000502 "proteasome complex"
evidence=NAS] [GO:0006511 "ubiquitin-dependent protein catabolic
process" evidence=NAS] [GO:0016887 "ATPase activity" evidence=NAS]
[GO:0008540 "proteasome regulatory particle, base subcomplex"
evidence=ISS] [GO:0004175 "endopeptidase activity" evidence=IDA]
[GO:0005838 "proteasome regulatory particle" evidence=ISS;IDA]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0030163 "protein catabolic process" evidence=IEA]
[GO:0009987 "cellular process" evidence=IMP] [GO:0007052 "mitotic
spindle organization" evidence=IMP] [GO:0000022 "mitotic spindle
elongation" evidence=IMP] [GO:0008283 "cell proliferation"
evidence=IMP] [GO:0006974 "response to DNA damage stimulus"
evidence=IMP] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 EMBL:AE014297 GO:GO:0005524 GO:GO:0005634
GO:GO:0005737 GO:GO:0008283 GO:GO:0006508 GO:GO:0006974
GO:GO:0016887 GO:GO:0004175 GO:GO:0030163 GO:GO:0000022
eggNOG:COG1222 TIGRFAMs:TIGR01242 GO:GO:0008540 KO:K03062
OMA:FIRNQER GeneTree:ENSGT00550000074818 EMBL:U39303 EMBL:AY058759
RefSeq:NP_524469.2 UniGene:Dm.2368 ProteinModelPortal:P48601
SMR:P48601 DIP:DIP-17276N IntAct:P48601 MINT:MINT-817128
STRING:P48601 PaxDb:P48601 PRIDE:P48601 EnsemblMetazoa:FBtr0084520
GeneID:42828 KEGG:dme:Dmel_CG5289 CTD:42828 FlyBase:FBgn0015282
InParanoid:P48601 OrthoDB:EOG4R4XJ3 PhylomeDB:P48601
BRENDA:3.4.25.1 ChiTaRS:Pros26.4 GenomeRNAi:42828 NextBio:830777
Bgee:P48601 GermOnline:CG5289 Uniprot:P48601
Length = 439
Score = 487 (176.5 bits), Expect = 1.3e-49, Sum P(2) = 1.3e-49
Identities = 91/173 (52%), Positives = 128/173 (73%)
Query: 2 LLCTSFDTELVTAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENSPXXXXXXXXXXXXTK 61
LL + + F+RVVGSE +QKYLG+GP++VR++FR+A+E++P TK
Sbjct: 233 LLAKAVANQTSATFLRVVGSELIQKYLGDGPKLVRELFRVAEEHAPSIVFIDEIDAVGTK 292
Query: 62 RFDAQTGADREVQRILLELLNQMDGFDQTTNVKVIMATNRADTLDPALLRPGRLDRKIEF 121
R+D+ +G +RE+QR +LELLNQ+DGFD +VKVIMATNR +TLDPAL+RPGR+DRKIEF
Sbjct: 293 RYDSNSGGEREIQRTMLELLNQLDGFDSRGDVKVIMATNRIETLDPALIRPGRIDRKIEF 352
Query: 122 PLPDRRQKRLVFSTITAKMNLSDEVDLEDYVARPDRISGADINAICQEV-IMA 173
PLPD + KR +F+ T++M L+++V+L + + D +SGADI AIC E +MA
Sbjct: 353 PLPDEKTKRRIFTIHTSRMTLAEDVNLSELIMAKDDLSGADIKAICTEAGLMA 405
Score = 299 (110.3 bits), Expect = 1.5e-26, P = 1.5e-26
Identities = 56/99 (56%), Positives = 78/99 (78%)
Query: 222 GNLQVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLVFSTITAKMNLSDEVDLED 281
G+++VIMATNR +TLDPAL+RPGR+DRKIEFPLPD + KR +F+ T++M L+++V+L +
Sbjct: 322 GDVKVIMATNRIETLDPALIRPGRIDRKIEFPLPDEKTKRRIFTIHTSRMTLAEDVNLSE 381
Query: 282 YVARPDRISGADINAICQEAGMHAVRENRYIVLPKDFEK 320
+ D +SGADI AIC EAG+ A+RE R V +DF+K
Sbjct: 382 LIMAKDDLSGADIKAICTEAGLMALRERRMKVTNEDFKK 420
Score = 186 (70.5 bits), Expect = 9.9e-13, Sum P(2) = 9.9e-13
Identities = 35/61 (57%), Positives = 48/61 (78%)
Query: 169 EVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLVFSTITAKMNFMLNIGNLQVIM 228
+VIMATNR +TLDPAL+RPGR+DRKIEFPLPD + KR +F+ T++M ++ ++IM
Sbjct: 325 KVIMATNRIETLDPALIRPGRIDRKIEFPLPDEKTKRRIFTIHTSRMTLAEDVNLSELIM 384
Query: 229 A 229
A
Sbjct: 385 A 385
Score = 47 (21.6 bits), Expect = 1.3e-49, Sum P(2) = 1.3e-49
Identities = 13/38 (34%), Positives = 21/38 (55%)
Query: 326 AGMHAVRENRYIVLPKDFEKGYKN--NTKKDESEHEFY 361
AG+ A+RE R V +DF+K ++ KK+ + Y
Sbjct: 401 AGLMALRERRMKVTNEDFKKSKESVLYRKKEGTPEGLY 438
>TAIR|locus:2119926 [details] [associations]
symbol:RPT2a "regulatory particle AAA-ATPase 2A"
species:3702 "Arabidopsis thaliana" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISM;TAS] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0016887 "ATPase activity" evidence=IGI;ISS] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=RCA;TAS]
[GO:0009933 "meristem structural organization" evidence=IMP]
[GO:0009965 "leaf morphogenesis" evidence=IMP] [GO:0010015 "root
morphogenesis" evidence=IMP] [GO:0010078 "maintenance of root
meristem identity" evidence=IMP] [GO:0010311 "lateral root
formation" evidence=IMP] [GO:0035266 "meristem growth"
evidence=IMP] [GO:0048367 "shoot system development" evidence=IMP]
[GO:0048827 "phyllome development" evidence=IMP] [GO:0048829 "root
cap development" evidence=IMP] [GO:0046686 "response to cadmium
ion" evidence=IEP;RCA] [GO:0016020 "membrane" evidence=IDA]
[GO:0009408 "response to heat" evidence=IMP] [GO:0043161
"proteasomal ubiquitin-dependent protein catabolic process"
evidence=RCA;IMP] [GO:0043248 "proteasome assembly"
evidence=RCA;IMP] [GO:0048364 "root development" evidence=IMP]
[GO:0051788 "response to misfolded protein" evidence=RCA;IMP]
[GO:0080129 "proteasome core complex assembly" evidence=RCA;IMP]
[GO:0000502 "proteasome complex" evidence=IDA] [GO:0005829
"cytosol" evidence=RCA] [GO:0007292 "female gamete generation"
evidence=IGI] [GO:0048232 "male gamete generation" evidence=IGI]
[GO:0090351 "seedling development" evidence=IMP] [GO:0006094
"gluconeogenesis" evidence=RCA] [GO:0006096 "glycolysis"
evidence=RCA] [GO:0006635 "fatty acid beta-oxidation" evidence=RCA]
[GO:0009407 "toxin catabolic process" evidence=RCA] [GO:0009651
"response to salt stress" evidence=RCA] [GO:0009853
"photorespiration" evidence=RCA] [GO:0042023 "DNA
endoreduplication" evidence=RCA] [GO:0051510 "regulation of
unidimensional cell growth" evidence=RCA] [GO:0060968 "regulation
of gene silencing" evidence=IMP] [GO:0008540 "proteasome regulatory
particle, base subcomplex" evidence=IDA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GO:GO:0005634 GO:GO:0005737 GO:GO:0046686 EMBL:CP002687
GenomeReviews:CT486007_GR GO:GO:0043161 GO:GO:0016020 EMBL:AL078470
EMBL:AL161574 GO:GO:0009408 GO:GO:0010311 GO:GO:0048829
GO:GO:0000502 GO:GO:0043248 GO:GO:0017111 GO:GO:0009965
GO:GO:0009933 EMBL:AL078469 GO:GO:0007292 GO:GO:0060968
GO:GO:0010078 HSSP:P43773 GO:GO:0051788 GO:GO:0090351 GO:GO:0048232
eggNOG:COG1222 TIGRFAMs:TIGR01242 HOGENOM:HOG000225143
EMBL:AF123391 EMBL:AB161192 EMBL:AY034975 IPI:IPI00538666
PIR:T08959 RefSeq:NP_194633.1 UniGene:At.24596
ProteinModelPortal:Q9SZD4 SMR:Q9SZD4 IntAct:Q9SZD4 STRING:Q9SZD4
PaxDb:Q9SZD4 PRIDE:Q9SZD4 EnsemblPlants:AT4G29040.1 GeneID:829025
KEGG:ath:AT4G29040 GeneFarm:1494 TAIR:At4g29040 InParanoid:Q9SZD4
KO:K03062 OMA:SAIVMEA PhylomeDB:Q9SZD4 ProtClustDB:CLSN2683303
GO:GO:0035266 Uniprot:Q9SZD4
Length = 443
Score = 484 (175.4 bits), Expect = 4.2e-49, Sum P(2) = 4.2e-49
Identities = 92/168 (54%), Positives = 122/168 (72%)
Query: 2 LLCTSFDTELVTAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENSPXXXXXXXXXXXXTK 61
LL + F+RVVGSE +QKYLG+GP++VR++FR+A + SP TK
Sbjct: 237 LLAKAVANSTSATFLRVVGSELIQKYLGDGPKLVRELFRVADDLSPSIVFIDEIDAVGTK 296
Query: 62 RFDAQTGADREVQRILLELLNQMDGFDQTTNVKVIMATNRADTLDPALLRPGRLDRKIEF 121
R+DA +G +RE+QR +LELLNQ+DGFD +VKVI+ATNR ++LDPALLRPGR+DRKIEF
Sbjct: 297 RYDAHSGGEREIQRTMLELLNQLDGFDSRGDVKVILATNRIESLDPALLRPGRIDRKIEF 356
Query: 122 PLPDRRQKRLVFSTITAKMNLSDEVDLEDYVARPDRISGADINAICQE 169
PLPD + +R +F T+KM LS++V+LE++V D SGADI AIC E
Sbjct: 357 PLPDIKTRRRIFQIHTSKMTLSEDVNLEEFVMTKDEFSGADIKAICTE 404
Score = 304 (112.1 bits), Expect = 4.5e-27, P = 4.5e-27
Identities = 59/103 (57%), Positives = 79/103 (76%)
Query: 222 GNLQVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLVFSTITAKMNLSDEVDLED 281
G+++VI+ATNR ++LDPALLRPGR+DRKIEFPLPD + +R +F T+KM LS++V+LE+
Sbjct: 326 GDVKVILATNRIESLDPALLRPGRIDRKIEFPLPDIKTRRRIFQIHTSKMTLSEDVNLEE 385
Query: 282 YVARPDRISGADINAICQEAGMHAVRENRYIVLPKDFEKGYKK 324
+V D SGADI AIC EAG+ A+RE R V DF+K +K
Sbjct: 386 FVMTKDEFSGADIKAICTEAGLLALRERRMKVTHPDFKKAKEK 428
Score = 172 (65.6 bits), Expect = 8.0e-11, Sum P(2) = 8.0e-11
Identities = 34/62 (54%), Positives = 47/62 (75%)
Query: 169 EVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLVFSTITAKMNFMLNIGNLQVIM 228
+VI+ATNR ++LDPALLRPGR+DRKIEFPLPD + +R +F T+KM ++ NL+ +
Sbjct: 329 KVILATNRIESLDPALLRPGRIDRKIEFPLPDIKTRRRIFQIHTSKMTLSEDV-NLEEFV 387
Query: 229 AT 230
T
Sbjct: 388 MT 389
Score = 45 (20.9 bits), Expect = 4.2e-49, Sum P(2) = 4.2e-49
Identities = 15/35 (42%), Positives = 18/35 (51%)
Query: 326 AGMHAVRENRYIVLPKDFEKGY-KNNTKKDESEHE 359
AG+ A+RE R V DF+K K KK E E
Sbjct: 405 AGLLALRERRMKVTHPDFKKAKEKVMFKKKEGVPE 439
>TAIR|locus:2061639 [details] [associations]
symbol:RPT2b "regulatory particle AAA-ATPase 2b"
species:3702 "Arabidopsis thaliana" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISM] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0016887 "ATPase activity" evidence=ISS] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0005886 "plasma
membrane" evidence=IDA] [GO:0000502 "proteasome complex"
evidence=IDA] [GO:0005829 "cytosol" evidence=IDA] [GO:0007292
"female gamete generation" evidence=IGI] [GO:0010078 "maintenance
of root meristem identity" evidence=IMP] [GO:0048232 "male gamete
generation" evidence=IGI] [GO:0042023 "DNA endoreduplication"
evidence=RCA] [GO:0043161 "proteasomal ubiquitin-dependent protein
catabolic process" evidence=RCA] [GO:0043248 "proteasome assembly"
evidence=RCA] [GO:0051510 "regulation of unidimensional cell
growth" evidence=RCA] [GO:0051788 "response to misfolded protein"
evidence=RCA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005829 GO:GO:0005886 GO:GO:0005524
GO:GO:0005634 EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0030163
GO:GO:0000502 GO:GO:0017111 EMBL:AC006081 GO:GO:0007292
GO:GO:0010078 HSSP:P43773 GO:GO:0048232 eggNOG:COG1222
TIGRFAMs:TIGR01242 HOGENOM:HOG000225143 UniGene:At.24596 KO:K03062
ProtClustDB:CLSN2683303 EMBL:AF372977 EMBL:AY035072 EMBL:AY056335
EMBL:AY087584 IPI:IPI00521093 PIR:E84585 RefSeq:NP_179604.1
UniGene:At.13496 ProteinModelPortal:Q9SL67 SMR:Q9SL67 IntAct:Q9SL67
STRING:Q9SL67 PaxDb:Q9SL67 PRIDE:Q9SL67 EnsemblPlants:AT2G20140.1
GeneID:816533 KEGG:ath:AT2G20140 GeneFarm:1495 TAIR:At2g20140
InParanoid:Q9SL67 OMA:FIRNQER PhylomeDB:Q9SL67 Uniprot:Q9SL67
Length = 443
Score = 481 (174.4 bits), Expect = 1.1e-48, Sum P(2) = 1.1e-48
Identities = 91/168 (54%), Positives = 122/168 (72%)
Query: 2 LLCTSFDTELVTAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENSPXXXXXXXXXXXXTK 61
LL + F+RVVGSE +QKYLG+GP++VR++FR+A + SP TK
Sbjct: 237 LLAKAVANSTSATFLRVVGSELIQKYLGDGPKLVRELFRVADDLSPSIVFIDEIDAVGTK 296
Query: 62 RFDAQTGADREVQRILLELLNQMDGFDQTTNVKVIMATNRADTLDPALLRPGRLDRKIEF 121
R+DA +G +RE+QR +LELLNQ+DGFD +VKVI+ATNR ++LDPALLRPGR+DRKIEF
Sbjct: 297 RYDANSGGEREIQRTMLELLNQLDGFDSRGDVKVILATNRIESLDPALLRPGRIDRKIEF 356
Query: 122 PLPDRRQKRLVFSTITAKMNLSDEVDLEDYVARPDRISGADINAICQE 169
PLPD + +R +F T+KM L+++V+LE++V D SGADI AIC E
Sbjct: 357 PLPDIKTRRRIFQIHTSKMTLAEDVNLEEFVMTKDEFSGADIKAICTE 404
Score = 300 (110.7 bits), Expect = 1.3e-26, P = 1.3e-26
Identities = 58/103 (56%), Positives = 79/103 (76%)
Query: 222 GNLQVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLVFSTITAKMNLSDEVDLED 281
G+++VI+ATNR ++LDPALLRPGR+DRKIEFPLPD + +R +F T+KM L+++V+LE+
Sbjct: 326 GDVKVILATNRIESLDPALLRPGRIDRKIEFPLPDIKTRRRIFQIHTSKMTLAEDVNLEE 385
Query: 282 YVARPDRISGADINAICQEAGMHAVRENRYIVLPKDFEKGYKK 324
+V D SGADI AIC EAG+ A+RE R V DF+K +K
Sbjct: 386 FVMTKDEFSGADIKAICTEAGLLALRERRMKVTHVDFKKAKEK 428
Score = 172 (65.6 bits), Expect = 1.0e-10, Sum P(2) = 1.0e-10
Identities = 34/62 (54%), Positives = 47/62 (75%)
Query: 169 EVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLVFSTITAKMNFMLNIGNLQVIM 228
+VI+ATNR ++LDPALLRPGR+DRKIEFPLPD + +R +F T+KM ++ NL+ +
Sbjct: 329 KVILATNRIESLDPALLRPGRIDRKIEFPLPDIKTRRRIFQIHTSKMTLAEDV-NLEEFV 387
Query: 229 AT 230
T
Sbjct: 388 MT 389
Score = 44 (20.5 bits), Expect = 1.1e-48, Sum P(2) = 1.1e-48
Identities = 15/35 (42%), Positives = 18/35 (51%)
Query: 326 AGMHAVRENRYIVLPKDFEKGY-KNNTKKDESEHE 359
AG+ A+RE R V DF+K K KK E E
Sbjct: 405 AGLLALRERRMKVTHVDFKKAKEKVMFKKKEGVPE 439
>ASPGD|ASPL0000049719 [details] [associations]
symbol:AN2213 species:162425 "Emericella nidulans"
[GO:0005524 "ATP binding" evidence=IEA] [GO:0070682 "proteasome
regulatory particle assembly" evidence=IEA] [GO:0043161
"proteasomal ubiquitin-dependent protein catabolic process"
evidence=IEA] [GO:0045732 "positive regulation of protein catabolic
process" evidence=IEA] [GO:0043171 "peptide catabolic process"
evidence=IEA] [GO:0016887 "ATPase activity" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0005829 "cytosol"
evidence=IEA] [GO:0008540 "proteasome regulatory particle, base
subcomplex" evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005737 EMBL:BN001307
GO:GO:0030163 GO:GO:0000502 GO:GO:0017111 eggNOG:COG1222
TIGRFAMs:TIGR01242 HOGENOM:HOG000225143 KO:K03062 OMA:FIRNQER
OrthoDB:EOG4FN7S6 EMBL:AACD01000035 RefSeq:XP_659817.1
ProteinModelPortal:Q5BB67 STRING:Q5BB67
EnsemblFungi:CADANIAT00008897 GeneID:2875757 KEGG:ani:AN2213.2
Uniprot:Q5BB67
Length = 460
Score = 471 (170.9 bits), Expect = 2.6e-47, Sum P(2) = 2.6e-47
Identities = 88/173 (50%), Positives = 126/173 (72%)
Query: 2 LLCTSFDTELVTAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENSPXXXXXXXXXXXXTK 61
LL + + F+R+VGSE +QKYLG+GPR+VR +F++A E++P TK
Sbjct: 253 LLAKAVANQTSATFLRIVGSELIQKYLGDGPRLVRQIFQVAAEHAPSIVFIDEIDAIGTK 312
Query: 62 RFDAQTGADREVQRILLELLNQMDGFDQTTNVKVIMATNRADTLDPALLRPGRLDRKIEF 121
R+D+ +G +RE+QR +LELLNQ+DGFD +VKVIMATN+ +TLDPAL+RPGR+DRKI F
Sbjct: 313 RYDSTSGGEREIQRTMLELLNQLDGFDDRGDVKVIMATNKIETLDPALIRPGRIDRKILF 372
Query: 122 PLPDRRQKRLVFSTITAKMNLSDEVDLEDYVARPDRISGADINAICQEV-IMA 173
PD+ K+ +F+ T+KM+L D+VDL++++ + D +SGADI AIC E +MA
Sbjct: 373 ENPDQNTKKKIFTLHTSKMSLGDDVDLDEFINQKDDLSGADIRAICTEAGLMA 425
Score = 279 (103.3 bits), Expect = 4.9e-24, P = 4.9e-24
Identities = 53/97 (54%), Positives = 75/97 (77%)
Query: 222 GNLQVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLVFSTITAKMNLSDEVDLED 281
G+++VIMATN+ +TLDPAL+RPGR+DRKI F PD+ K+ +F+ T+KM+L D+VDL++
Sbjct: 342 GDVKVIMATNKIETLDPALIRPGRIDRKILFENPDQNTKKKIFTLHTSKMSLGDDVDLDE 401
Query: 282 YVARPDRISGADINAICQEAGMHAVRENRYIVLPKDF 318
++ + D +SGADI AIC EAG+ A+RE R V DF
Sbjct: 402 FINQKDDLSGADIRAICTEAGLMALRERRMRVQMDDF 438
Score = 150 (57.9 bits), Expect = 8.9e-08, Sum P(2) = 8.9e-08
Identities = 34/74 (45%), Positives = 50/74 (67%)
Query: 169 EVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLVFSTITAKMNFMLNIGNLQVIM 228
+VIMATN+ +TLDPAL+RPGR+DRKI F PD+ K+ +F+ T+KM+ ++ + I
Sbjct: 345 KVIMATNKIETLDPALIRPGRIDRKILFENPDQNTKKKIFTLHTSKMSLGDDVDLDEFI- 403
Query: 229 ATNRADTLDPALLR 242
N+ D L A +R
Sbjct: 404 --NQKDDLSGADIR 415
Score = 41 (19.5 bits), Expect = 2.6e-47, Sum P(2) = 2.6e-47
Identities = 12/31 (38%), Positives = 16/31 (51%)
Query: 326 AGMHAVRENRYIVLPKDFEKGYKN--NTKKD 354
AG+ A+RE R V DF + TK+D
Sbjct: 421 AGLMALRERRMRVQMDDFRAARERIMKTKQD 451
>GENEDB_PFALCIPARUM|PF10_0081 [details] [associations]
symbol:PF10_0081 "26S proteasome regulatory
subunit 4, putative" species:5833 "Plasmodium falciparum"
[GO:0004175 "endopeptidase activity" evidence=ISS] [GO:0005838
"proteasome regulatory particle" evidence=ISS] [GO:0006508
"proteolysis" evidence=ISS] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005737 GO:GO:0006508
GO:GO:0004175 GO:GO:0030163 GO:GO:0017111 EMBL:AE014185
TIGRFAMs:TIGR01242 HOGENOM:HOG000225143 KO:K03062
ProtClustDB:PTZ00361 GO:GO:0005838 RefSeq:XP_001347366.2
ProteinModelPortal:Q8IJW0 IntAct:Q8IJW0 MINT:MINT-1726172
PRIDE:Q8IJW0 EnsemblProtists:PF10_0081:mRNA GeneID:810239
KEGG:pfa:PF10_0081 EuPathDB:PlasmoDB:PF3D7_1008400 Uniprot:Q8IJW0
Length = 448
Score = 485 (175.8 bits), Expect = 3.0e-46, P = 3.0e-46
Identities = 96/190 (50%), Positives = 132/190 (69%)
Query: 2 LLCTSFDTELVTAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENSPXXXXXXXXXXXXTK 61
LL + E F+RVVGSE +QKYLG+GP++VR++F++A+E++P TK
Sbjct: 242 LLAKAVANETSATFLRVVGSELIQKYLGDGPKLVREMFKVAEEHAPSIVFIDEIDAVGTK 301
Query: 62 RFDAQTGADREVQRILLELLNQMDGFDQTTNVKVIMATNRADTLDPALLRPGRLDRKIEF 121
R++A +G +RE+QR +LELLNQ+DGFD +VKVIMATNR D+LDPAL+RPGR+DRKI+
Sbjct: 302 RYEATSGGEREIQRTMLELLNQLDGFDSRGDVKVIMATNRIDSLDPALIRPGRIDRKIQL 361
Query: 122 PLPDRRQKRLVFSTITAKMNLSDEVDLEDYVARPDRISGADINAICQEV-IMATN-RADT 179
P PD + KR +F T+KM +S +VDLE++V D +SGADI AIC E ++A R
Sbjct: 362 PNPDTKTKRRIFQIHTSKMTMSPDVDLEEFVMSKDELSGADIKAICTEAGLLALRERRMK 421
Query: 180 LDPALLRPGR 189
+ A LR R
Sbjct: 422 ITQADLRKAR 431
Score = 291 (107.5 bits), Expect = 1.7e-25, P = 1.7e-25
Identities = 56/103 (54%), Positives = 74/103 (71%)
Query: 222 GNLQVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLVFSTITAKMNLSDEVDLED 281
G+++VIMATNR D+LDPAL+RPGR+DRKI+ P PD + KR +F T+KM +S +VDLE+
Sbjct: 331 GDVKVIMATNRIDSLDPALIRPGRIDRKIQLPNPDTKTKRRIFQIHTSKMTMSPDVDLEE 390
Query: 282 YVARPDRISGADINAICQEAGMHAVRENRYIVLPKDFEKGYKK 324
+V D +SGADI AIC EAG+ A+RE R + D K K
Sbjct: 391 FVMSKDELSGADIKAICTEAGLLALRERRMKITQADLRKARDK 433
Score = 166 (63.5 bits), Expect = 1.6e-09, P = 1.6e-09
Identities = 38/98 (38%), Positives = 58/98 (59%)
Query: 169 EVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLVFSTITAKMNFMLNIGNLQVIM 228
+VIMATNR D+LDPAL+RPGR+DRKI+ P PD + KR +F T+KM ++ + +M
Sbjct: 334 KVIMATNRIDSLDPALIRPGRIDRKIQLPNPDTKTKRRIFQIHTSKMTMSPDVDLEEFVM 393
Query: 229 ATNRADTLDPALL--RPGRL---DRKIEFPLPDRRQKR 261
+ + D + G L +R+++ D R+ R
Sbjct: 394 SKDELSGADIKAICTEAGLLALRERRMKITQADLRKAR 431
>UNIPROTKB|Q8IJW0 [details] [associations]
symbol:PF10_0081 "26S proteasome regulatory subunit 4,
putative" species:36329 "Plasmodium falciparum 3D7" [GO:0004175
"endopeptidase activity" evidence=ISS] [GO:0005838 "proteasome
regulatory particle" evidence=ISS] [GO:0006508 "proteolysis"
evidence=ISS] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005737 GO:GO:0006508
GO:GO:0004175 GO:GO:0030163 GO:GO:0017111 EMBL:AE014185
TIGRFAMs:TIGR01242 HOGENOM:HOG000225143 KO:K03062
ProtClustDB:PTZ00361 GO:GO:0005838 RefSeq:XP_001347366.2
ProteinModelPortal:Q8IJW0 IntAct:Q8IJW0 MINT:MINT-1726172
PRIDE:Q8IJW0 EnsemblProtists:PF10_0081:mRNA GeneID:810239
KEGG:pfa:PF10_0081 EuPathDB:PlasmoDB:PF3D7_1008400 Uniprot:Q8IJW0
Length = 448
Score = 485 (175.8 bits), Expect = 3.0e-46, P = 3.0e-46
Identities = 96/190 (50%), Positives = 132/190 (69%)
Query: 2 LLCTSFDTELVTAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENSPXXXXXXXXXXXXTK 61
LL + E F+RVVGSE +QKYLG+GP++VR++F++A+E++P TK
Sbjct: 242 LLAKAVANETSATFLRVVGSELIQKYLGDGPKLVREMFKVAEEHAPSIVFIDEIDAVGTK 301
Query: 62 RFDAQTGADREVQRILLELLNQMDGFDQTTNVKVIMATNRADTLDPALLRPGRLDRKIEF 121
R++A +G +RE+QR +LELLNQ+DGFD +VKVIMATNR D+LDPAL+RPGR+DRKI+
Sbjct: 302 RYEATSGGEREIQRTMLELLNQLDGFDSRGDVKVIMATNRIDSLDPALIRPGRIDRKIQL 361
Query: 122 PLPDRRQKRLVFSTITAKMNLSDEVDLEDYVARPDRISGADINAICQEV-IMATN-RADT 179
P PD + KR +F T+KM +S +VDLE++V D +SGADI AIC E ++A R
Sbjct: 362 PNPDTKTKRRIFQIHTSKMTMSPDVDLEEFVMSKDELSGADIKAICTEAGLLALRERRMK 421
Query: 180 LDPALLRPGR 189
+ A LR R
Sbjct: 422 ITQADLRKAR 431
Score = 291 (107.5 bits), Expect = 1.7e-25, P = 1.7e-25
Identities = 56/103 (54%), Positives = 74/103 (71%)
Query: 222 GNLQVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLVFSTITAKMNLSDEVDLED 281
G+++VIMATNR D+LDPAL+RPGR+DRKI+ P PD + KR +F T+KM +S +VDLE+
Sbjct: 331 GDVKVIMATNRIDSLDPALIRPGRIDRKIQLPNPDTKTKRRIFQIHTSKMTMSPDVDLEE 390
Query: 282 YVARPDRISGADINAICQEAGMHAVRENRYIVLPKDFEKGYKK 324
+V D +SGADI AIC EAG+ A+RE R + D K K
Sbjct: 391 FVMSKDELSGADIKAICTEAGLLALRERRMKITQADLRKARDK 433
Score = 166 (63.5 bits), Expect = 1.6e-09, P = 1.6e-09
Identities = 38/98 (38%), Positives = 58/98 (59%)
Query: 169 EVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLVFSTITAKMNFMLNIGNLQVIM 228
+VIMATNR D+LDPAL+RPGR+DRKI+ P PD + KR +F T+KM ++ + +M
Sbjct: 334 KVIMATNRIDSLDPALIRPGRIDRKIQLPNPDTKTKRRIFQIHTSKMTMSPDVDLEEFVM 393
Query: 229 ATNRADTLDPALL--RPGRL---DRKIEFPLPDRRQKR 261
+ + D + G L +R+++ D R+ R
Sbjct: 394 SKDELSGADIKAICTEAGLLALRERRMKITQADLRKAR 431
>SGD|S000002165 [details] [associations]
symbol:RPT2 "ATPase of the 19S regulatory particle of the 26S
proteasome" species:4932 "Saccharomyces cerevisiae" [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
[GO:0030163 "protein catabolic process" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA;IDA] [GO:0016887 "ATPase activity"
evidence=IDA] [GO:0070682 "proteasome regulatory particle assembly"
evidence=IMP] [GO:0006511 "ubiquitin-dependent protein catabolic
process" evidence=IMP] [GO:0008540 "proteasome regulatory particle,
base subcomplex" evidence=IDA] [GO:0045732 "positive regulation of
protein catabolic process" evidence=IDA] [GO:0043171 "peptide
catabolic process" evidence=IMP] [GO:0000502 "proteasome complex"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
SGD:S000002165 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737
EMBL:BK006938 GO:GO:0016887 GO:GO:0043171 GO:GO:0006511
GO:GO:0045732 EMBL:Z48432 GO:GO:0070682 eggNOG:COG1222
TIGRFAMs:TIGR01242 HOGENOM:HOG000225143 GO:GO:0008540 PDB:4B4T
PDBsum:4B4T KO:K03062 OMA:FIRNQER GeneTree:ENSGT00550000074818
OrthoDB:EOG4FN7S6 EMBL:X81070 EMBL:L17040 EMBL:Z74055 PIR:S46613
RefSeq:NP_010277.1 ProteinModelPortal:P40327 SMR:P40327
DIP:DIP-6282N IntAct:P40327 MINT:MINT-632695 STRING:P40327
PaxDb:P40327 PeptideAtlas:P40327 PRIDE:P40327 EnsemblFungi:YDL007W
GeneID:851557 KEGG:sce:YDL007W NextBio:968983 Genevestigator:P40327
GermOnline:YDL007W Uniprot:P40327
Length = 437
Score = 453 (164.5 bits), Expect = 4.7e-46, Sum P(2) = 4.7e-46
Identities = 86/168 (51%), Positives = 117/168 (69%)
Query: 2 LLCTSFDTELVTAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENSPXXXXXXXXXXXXTK 61
LL + + F+R+VGSE +QKYLG+GPR+ R +F++A EN+P TK
Sbjct: 231 LLAKAVANQTSATFLRIVGSELIQKYLGDGPRLCRQIFKVAGENAPSIVFIDEIDAIGTK 290
Query: 62 RFDAQTGADREVQRILLELLNQMDGFDQTTNVKVIMATNRADTLDPALLRPGRLDRKIEF 121
R+D+ +G +RE+QR +LELLNQ+DGFD +VKVIMATN+ +TLDPAL+RPGR+DRKI F
Sbjct: 291 RYDSNSGGEREIQRTMLELLNQLDGFDDRGDVKVIMATNKIETLDPALIRPGRIDRKILF 350
Query: 122 PLPDRRQKRLVFSTITAKMNLSDEVDLEDYVARPDRISGADINAICQE 169
PD K+ + T+KMNLS++V+LE V D +SGADI A+C E
Sbjct: 351 ENPDLSTKKKILGIHTSKMNLSEDVNLETLVTTKDDLSGADIQAMCTE 398
Score = 272 (100.8 bits), Expect = 2.3e-23, P = 2.3e-23
Identities = 57/113 (50%), Positives = 79/113 (69%)
Query: 222 GNLQVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLVFSTITAKMNLSDEVDLED 281
G+++VIMATN+ +TLDPAL+RPGR+DRKI F PD K+ + T+KMNLS++V+LE
Sbjct: 320 GDVKVIMATNKIETLDPALIRPGRIDRKILFENPDLSTKKKILGIHTSKMNLSEDVNLET 379
Query: 282 YVARPDRISGADINAICQEAGMHAVRENRYIVLPKDFEKGYKKCAGMHAVREN 334
V D +SGADI A+C EAG+ A+RE R V +DF++ K+ + V EN
Sbjct: 380 LVTTKDDLSGADIQAMCTEAGLLALRERRMQVTAEDFKQA-KERVMKNKVEEN 431
Score = 154 (59.3 bits), Expect = 6.2e-09, Sum P(2) = 6.2e-09
Identities = 31/62 (50%), Positives = 44/62 (70%)
Query: 169 EVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLVFSTITAKMNFMLNIGNLQVIM 228
+VIMATN+ +TLDPAL+RPGR+DRKI F PD K+ + T+KMN ++ NL+ ++
Sbjct: 323 KVIMATNKIETLDPALIRPGRIDRKILFENPDLSTKKKILGIHTSKMNLSEDV-NLETLV 381
Query: 229 AT 230
T
Sbjct: 382 TT 383
Score = 47 (21.6 bits), Expect = 4.7e-46, Sum P(2) = 4.7e-46
Identities = 12/32 (37%), Positives = 19/32 (59%)
Query: 326 AGMHAVRENRYIVLPKDFEKGYKNNTKKDESE 357
AG+ A+RE R V +DF++ K K++ E
Sbjct: 399 AGLLALRERRMQVTAEDFKQA-KERVMKNKVE 429
>POMBASE|SPBC4.07c [details] [associations]
symbol:rpt2 "19S proteasome regulatory subunit Rpt2"
species:4896 "Schizosaccharomyces pombe" [GO:0005515 "protein
binding" evidence=IPI] [GO:0005524 "ATP binding" evidence=IC]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005829 "cytosol"
evidence=IDA] [GO:0007346 "regulation of mitotic cell cycle"
evidence=IC] [GO:0008540 "proteasome regulatory particle, base
subcomplex" evidence=IGI] [GO:0016887 "ATPase activity"
evidence=ISO] [GO:0043161 "proteasomal ubiquitin-dependent protein
catabolic process" evidence=IMP] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 PomBase:SPBC4.07c
GO:GO:0005829 GO:GO:0005524 GO:GO:0005634 GO:GO:0007346
GO:GO:0043161 EMBL:CU329671 GenomeReviews:CU329671_GR GO:GO:0016887
eggNOG:COG1222 TIGRFAMs:TIGR01242 HOGENOM:HOG000225143
GO:GO:0008540 KO:K03062 OMA:FIRNQER EMBL:Z29366 PIR:S39348
RefSeq:NP_595480.1 ProteinModelPortal:P36612 IntAct:P36612
STRING:P36612 PRIDE:P36612 EnsemblFungi:SPBC4.07c.1 GeneID:2540939
KEGG:spo:SPBC4.07c OrthoDB:EOG4FN7S6 NextBio:20802054
Uniprot:P36612
Length = 448
Score = 450 (163.5 bits), Expect = 9.7e-46, Sum P(2) = 9.7e-46
Identities = 89/169 (52%), Positives = 119/169 (70%)
Query: 2 LLCTSFDTELVTAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENSPXXXXXXXXXXXXTK 61
LL + + F+RVVGSE +QKYLG+GPR+VR +F A+E+SP TK
Sbjct: 240 LLAKAVANQTSATFLRVVGSELIQKYLGDGPRLVRQLFNAAEEHSPSIVFIDEIDAIGTK 299
Query: 62 RFDAQTGADREVQRILLELLNQMDGFDQTT-NVKVIMATNRADTLDPALLRPGRLDRKIE 120
R+DAQ+GA+RE+QR +LELLNQ+DGFD + ++KVIMATNR LDPAL+RPGR+DRKI
Sbjct: 300 RYDAQSGAEREIQRTMLELLNQLDGFDTSQRDIKVIMATNRISDLDPALIRPGRIDRKIL 359
Query: 121 FPLPDRRQKRLVFSTITAKMNLSDEVDLEDYVARPDRISGADINAICQE 169
F PD KR +F+ T+KMNL ++V+LE+ + D +SGA+I AI E
Sbjct: 360 FENPDEATKRKIFTIHTSKMNLGEDVNLEELIQCKDDLSGAEIKAIVSE 408
Score = 259 (96.2 bits), Expect = 7.6e-22, P = 7.6e-22
Identities = 55/125 (44%), Positives = 80/125 (64%)
Query: 200 DRRQKRLVFSTITAKMNFMLNIGNLQVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQ 259
+R +R + + F + +++VIMATNR LDPAL+RPGR+DRKI F PD
Sbjct: 308 EREIQRTMLELLNQLDGFDTSQRDIKVIMATNRISDLDPALIRPGRIDRKILFENPDEAT 367
Query: 260 KRLVFSTITAKMNLSDEVDLEDYVARPDRISGADINAICQEAGMHAVRENRYIVLPKDFE 319
KR +F+ T+KMNL ++V+LE+ + D +SGA+I AI EAG+ A+RE R V+ DF
Sbjct: 368 KRKIFTIHTSKMNLGEDVNLEELIQCKDDLSGAEIKAIVSEAGLLALRERRMRVVMDDFR 427
Query: 320 KGYKK 324
+ +K
Sbjct: 428 QAREK 432
Score = 157 (60.3 bits), Expect = 1.6e-08, P = 1.6e-08
Identities = 44/114 (38%), Positives = 65/114 (57%)
Query: 156 DRISGADINAICQEVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLVFSTITAKM 215
+++ G D + +VIMATNR LDPAL+RPGR+DRKI F PD KR +F+ T+KM
Sbjct: 320 NQLDGFDTSQRDIKVIMATNRISDLDPALIRPGRIDRKILFENPDEATKRKIFTIHTSKM 379
Query: 216 NFMLNIGNLQVIMATNRADTLDPALLRP-----GRL---DRKIEFPLPDRRQKR 261
N ++ NL+ ++ D L A ++ G L +R++ + D RQ R
Sbjct: 380 NLGEDV-NLEELIQCK--DDLSGAEIKAIVSEAGLLALRERRMRVVMDDFRQAR 430
Score = 47 (21.6 bits), Expect = 9.7e-46, Sum P(2) = 9.7e-46
Identities = 13/31 (41%), Positives = 18/31 (58%)
Query: 326 AGMHAVRENRYIVLPKDFEKGYKNNTK-KDE 355
AG+ A+RE R V+ DF + + K KDE
Sbjct: 409 AGLLALRERRMRVVMDDFRQAREKVLKTKDE 439
>CGD|CAL0005257 [details] [associations]
symbol:RPT2 species:5476 "Candida albicans" [GO:0005634
"nucleus" evidence=IEA] [GO:0005829 "cytosol" evidence=IEA]
[GO:0008540 "proteasome regulatory particle, base subcomplex"
evidence=IEA] [GO:0070682 "proteasome regulatory particle assembly"
evidence=IEA] [GO:0043161 "proteasomal ubiquitin-dependent protein
catabolic process" evidence=IEA] [GO:0045732 "positive regulation
of protein catabolic process" evidence=IEA] [GO:0043171 "peptide
catabolic process" evidence=IEA] [GO:0016887 "ATPase activity"
evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 CGD:CAL0005257 GO:GO:0005524 GO:GO:0005737
GO:GO:0030163 GO:GO:0017111 EMBL:AACQ01000051 EMBL:AACQ01000050
eggNOG:COG1222 TIGRFAMs:TIGR01242 KO:K03062 RefSeq:XP_717718.1
RefSeq:XP_717812.1 ProteinModelPortal:Q5A7M6 STRING:Q5A7M6
GeneID:3640525 GeneID:3640683 KEGG:cal:CaO19.12895
KEGG:cal:CaO19.5440 Uniprot:Q5A7M6
Length = 465
Score = 437 (158.9 bits), Expect = 2.9e-44, Sum P(2) = 2.9e-44
Identities = 80/168 (47%), Positives = 119/168 (70%)
Query: 2 LLCTSFDTELVTAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENSPXXXXXXXXXXXXTK 61
LL + + F+R+VGSE +QKYLG+GPR+ R +F++A +++P TK
Sbjct: 235 LLAKAVANQTSATFLRIVGSELIQKYLGDGPRLCRQIFQIAADHAPSIVFIDEIDAIGTK 294
Query: 62 RFDAQTGADREVQRILLELLNQMDGFDQTTNVKVIMATNRADTLDPALLRPGRLDRKIEF 121
R+++ +G +RE+QR +LELLNQ+DGFD ++KVIMATN+ ++LDPAL+RPGR+DRKI F
Sbjct: 295 RYESTSGGEREIQRTMLELLNQLDGFDDRGDIKVIMATNKIESLDPALIRPGRIDRKILF 354
Query: 122 PLPDRRQKRLVFSTITAKMNLSDEVDLEDYVARPDRISGADINAICQE 169
PD K+ + + T+KM+L+D+V+L++ V D +SGADI AIC E
Sbjct: 355 ENPDANTKKKILTIHTSKMSLADDVNLDEIVTGKDDLSGADIKAICTE 402
Score = 269 (99.8 bits), Expect = 6.9e-23, P = 6.9e-23
Identities = 56/113 (49%), Positives = 80/113 (70%)
Query: 222 GNLQVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLVFSTITAKMNLSDEVDLED 281
G+++VIMATN+ ++LDPAL+RPGR+DRKI F PD K+ + + T+KM+L+D+V+L++
Sbjct: 324 GDIKVIMATNKIESLDPALIRPGRIDRKILFENPDANTKKKILTIHTSKMSLADDVNLDE 383
Query: 282 YVARPDRISGADINAICQEAGMHAVRENRYIVLPKDFEKGYKKCAGMHAVREN 334
V D +SGADI AIC EAG+ A+RE R V +DF K K+ + V EN
Sbjct: 384 IVTGKDDLSGADIKAICTEAGLLALRERRMQVKAEDF-KSAKERVLKNKVEEN 435
Score = 142 (55.0 bits), Expect = 2.3e-07, Sum P(2) = 2.3e-07
Identities = 31/66 (46%), Positives = 46/66 (69%)
Query: 169 EVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLVFSTITAKMNFMLNIGNLQVIM 228
+VIMATN+ ++LDPAL+RPGR+DRKI F PD K+ + + T+KM+ ++ NL I+
Sbjct: 327 KVIMATNKIESLDPALIRPGRIDRKILFENPDANTKKKILTIHTSKMSLADDV-NLDEIV 385
Query: 229 ATNRAD 234
T + D
Sbjct: 386 -TGKDD 390
Score = 46 (21.3 bits), Expect = 2.9e-44, Sum P(2) = 2.9e-44
Identities = 13/32 (40%), Positives = 18/32 (56%)
Query: 326 AGMHAVRENRYIVLPKDFEKGYKNNTKKDESE 357
AG+ A+RE R V +DF K K K++ E
Sbjct: 403 AGLLALRERRMQVKAEDF-KSAKERVLKNKVE 433
>UNIPROTKB|Q58576 [details] [associations]
symbol:pan "Proteasome-activating nucleotidase"
species:243232 "Methanocaldococcus jannaschii DSM 2661" [GO:0003924
"GTPase activity" evidence=IDA] [GO:0006184 "GTP catabolic process"
evidence=IDA] [GO:0006200 "ATP catabolic process" evidence=IDA]
[GO:0010498 "proteasomal protein catabolic process" evidence=IDA]
[GO:0016887 "ATPase activity" evidence=IDA] [GO:0022623
"proteasome-activating nucleotidase complex" evidence=IDA]
[GO:0043273 "CTPase activity" evidence=IDA] [GO:0043335 "protein
unfolding" evidence=IDA] HAMAP:MF_00553 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GO:GO:0005737 GO:GO:0003924 GO:GO:0016887 GO:GO:0010498
GO:GO:0022623 GO:GO:0043335 GO:GO:0043273 EMBL:L77117
GenomeReviews:L77117_GR PIR:G64446 RefSeq:NP_248170.1 PDB:3H43
PDB:3H4M PDB:3IPM PDBsum:3H43 PDBsum:3H4M PDBsum:3IPM
ProteinModelPortal:Q58576 SMR:Q58576 PRIDE:Q58576 GeneID:1452074
KEGG:mja:MJ_1176 eggNOG:COG1222 KO:K03420 OMA:RVNERKA
ProtClustDB:PRK03992 EvolutionaryTrace:Q58576 InterPro:IPR023501
TIGRFAMs:TIGR01242 Uniprot:Q58576
Length = 430
Score = 411 (149.7 bits), Expect = 5.9e-42, Sum P(2) = 5.9e-42
Identities = 84/171 (49%), Positives = 110/171 (64%)
Query: 2 LLCTSFDTELVTAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENSPXXXXXXXXXXXXTK 61
LL + TE FIRVVGSE V+K++GEG +V+D+F+LAKE +P K
Sbjct: 219 LLAKAVATETNATFIRVVGSELVKKFIGEGASLVKDIFKLAKEKAPSIIFIDEIDAIAAK 278
Query: 62 RFDAQTGADREVQRILLELLNQMDGFDQTTNVKVIMATNRADTLDPALLRPGRLDRKIEF 121
R DA TG DREVQR L++LL +MDGFD +VK+I ATNR D LDPA+LRPGR DR IE
Sbjct: 279 RTDALTGGDREVQRTLMQLLAEMDGFDARGDVKIIGATNRPDILDPAILRPGRFDRIIEV 338
Query: 122 PLPDRRQKRLVFSTITAKMNLSDEVDLEDYVARPDRISGADINAICQEVIM 172
P PD + + + T KMNL+++V+LE+ + GA++ AIC E M
Sbjct: 339 PAPDEKGRLEILKIHTRKMNLAEDVNLEEIAKMTEGCVGAELKAICTEAGM 389
Score = 250 (93.1 bits), Expect = 7.1e-20, P = 7.1e-20
Identities = 54/125 (43%), Positives = 78/125 (62%)
Query: 200 DRRQKRLVFSTITAKMNFMLNIGNLQVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQ 259
DR +R + + A+M+ G++++I ATNR D LDPA+LRPGR DR IE P PD +
Sbjct: 287 DREVQRTLMQLL-AEMDGFDARGDVKIIGATNRPDILDPAILRPGRFDRIIEVPAPDEKG 345
Query: 260 KRLVFSTITAKMNLSDEVDLEDYVARPDRISGADINAICQEAGMHAVRENRYIVLPKDFE 319
+ + T KMNL+++V+LE+ + GA++ AIC EAGM+A+RE R V DF
Sbjct: 346 RLEILKIHTRKMNLAEDVNLEEIAKMTEGCVGAELKAICTEAGMNAIRELRDYVTMDDFR 405
Query: 320 KGYKK 324
K +K
Sbjct: 406 KAVEK 410
Score = 135 (52.6 bits), Expect = 4.4e-07, Sum P(2) = 4.4e-07
Identities = 29/59 (49%), Positives = 38/59 (64%)
Query: 169 EVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLVFSTITAKMNFMLNIGNLQVI 227
++I ATNR D LDPA+LRPGR DR IE P PD + + + T KMN ++ NL+ I
Sbjct: 311 KIIGATNRPDILDPAILRPGRFDRIIEVPAPDEKGRLEILKIHTRKMNLAEDV-NLEEI 368
Score = 50 (22.7 bits), Expect = 5.9e-42, Sum P(2) = 5.9e-42
Identities = 12/28 (42%), Positives = 16/28 (57%)
Query: 326 AGMHAVRENRYIVLPKDFEKGYKNNTKK 353
AGM+A+RE R V DF K + +K
Sbjct: 387 AGMNAIRELRDYVTMDDFRKAVEKIMEK 414
>WB|WBGene00015688 [details] [associations]
symbol:C10G11.8 species:6239 "Caenorhabditis elegans"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0030163 "protein
catabolic process" evidence=IEA] [GO:0006281 "DNA repair"
evidence=IEA] [GO:0006310 "DNA recombination" evidence=IEA]
[GO:0009378 "four-way junction helicase activity" evidence=IEA]
[GO:0016887 "ATPase activity" evidence=IEA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GO:GO:0005737 GO:GO:0030163 GO:GO:0017111 eggNOG:COG1222
TIGRFAMs:TIGR01242 HOGENOM:HOG000225143 KO:K03062
GeneTree:ENSGT00550000074818 HSSP:Q9LCZ4 EMBL:FO080499 PIR:D87802
RefSeq:NP_491811.1 ProteinModelPortal:P91025 SMR:P91025
STRING:P91025 PaxDb:P91025 EnsemblMetazoa:C10G11.8 GeneID:172324
KEGG:cel:CELE_C10G11.8 UCSC:C10G11.8 CTD:172324 WormBase:C10G11.8
InParanoid:P91025 OMA:RGIENAN NextBio:875027 Uniprot:P91025
Length = 438
Score = 411 (149.7 bits), Expect = 7.5e-42, Sum P(2) = 7.5e-42
Identities = 82/176 (46%), Positives = 111/176 (63%)
Query: 2 LLCTSFDTELVTAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENSPXXXXXXXXXXXXTK 61
LL + FIR GS+ VQK GEG R+VR +F++AKE +P TK
Sbjct: 232 LLAKAVANSTSATFIRATGSDLVQKQSGEGARLVRQIFQMAKEQAPSIVFIDEIDAVGTK 291
Query: 62 RFDAQTGADREVQRILLELLNQMDGFDQTTNVKVIMATNRADTLDPALLRPGRLDRKIEF 121
RFD + ++EVQR LLELLNQ+DGF+ +VK+IMATNR D+LDPAL+RPGR+DRKIE
Sbjct: 292 RFDTSSRGEQEVQRTLLELLNQLDGFESRGDVKIIMATNRIDSLDPALIRPGRIDRKIEL 351
Query: 122 PLPDRRQKRLVFSTITAKMNLSDEVDLEDYVARPDRISGADINAICQEVIMATNRA 177
P PD + ++ +F+ T+ M + V E+ + + ISGA+I A+C E M RA
Sbjct: 352 PKPDEKTRQKIFTIHTSGMTIQKAVTYENVLGKEKSISGAEIKAVCTEAGMLALRA 407
Score = 257 (95.5 bits), Expect = 1.1e-21, P = 1.1e-21
Identities = 50/102 (49%), Positives = 70/102 (68%)
Query: 222 GNLQVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLVFSTITAKMNLSDEVDLED 281
G++++IMATNR D+LDPAL+RPGR+DRKIE P PD + ++ +F+ T+ M + V E+
Sbjct: 321 GDVKIIMATNRIDSLDPALIRPGRIDRKIELPKPDEKTRQKIFTIHTSGMTIQKAVTYEN 380
Query: 282 YVARPDRISGADINAICQEAGMHAVRENRYIVLPKDFEKGYK 323
+ + ISGA+I A+C EAGM A+R R V DFEK K
Sbjct: 381 VLGKEKSISGAEIKAVCTEAGMLALRAQRKCVGTDDFEKAVK 422
Score = 151 (58.2 bits), Expect = 8.6e-09, Sum P(2) = 8.6e-09
Identities = 27/47 (57%), Positives = 38/47 (80%)
Query: 169 EVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLVFSTITAKM 215
++IMATNR D+LDPAL+RPGR+DRKIE P PD + ++ +F+ T+ M
Sbjct: 324 KIIMATNRIDSLDPALIRPGRIDRKIELPKPDEKTRQKIFTIHTSGM 370
Score = 49 (22.3 bits), Expect = 7.5e-42, Sum P(2) = 7.5e-42
Identities = 15/38 (39%), Positives = 20/38 (52%)
Query: 326 AGMHAVRENRYIVLPKDFEKGYKNN--TKKDESEHEFY 361
AGM A+R R V DFEK K+ +KK + F+
Sbjct: 400 AGMLALRAQRKCVGTDDFEKAVKSVMLSKKGGAPEGFF 437
>WB|WBGene00004506 [details] [associations]
symbol:rpt-6 species:6239 "Caenorhabditis elegans"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0030163 "protein
catabolic process" evidence=IEA] [GO:0006281 "DNA repair"
evidence=IEA] [GO:0006310 "DNA recombination" evidence=IEA]
[GO:0009378 "four-way junction helicase activity" evidence=IEA]
[GO:0016887 "ATPase activity" evidence=IEA] [GO:0009792 "embryo
development ending in birth or egg hatching" evidence=IMP]
[GO:0040010 "positive regulation of growth rate" evidence=IMP]
[GO:0040007 "growth" evidence=IMP] [GO:0002119 "nematode larval
development" evidence=IMP] [GO:0040011 "locomotion" evidence=IMP]
[GO:0007091 "metaphase/anaphase transition of mitotic cell cycle"
evidence=IMP] [GO:0008340 "determination of adult lifespan"
evidence=IMP] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0008340 GO:GO:0009792
GO:GO:0005737 GO:GO:0040007 GO:GO:0040010 GO:GO:0002119
GO:GO:0040011 GO:GO:0030163 HSSP:Q01853 GO:GO:0017111 EMBL:Z98866
GO:GO:0007091 eggNOG:COG1222 TIGRFAMs:TIGR01242
HOGENOM:HOG000225143 KO:K03066 GeneTree:ENSGT00550000074947
PIR:T27048 RefSeq:NP_499609.1 ProteinModelPortal:Q9XTT9 SMR:Q9XTT9
DIP:DIP-27139N IntAct:Q9XTT9 MINT:MINT-210855 STRING:Q9XTT9
PaxDb:Q9XTT9 EnsemblMetazoa:Y49E10.1.1 EnsemblMetazoa:Y49E10.1.2
GeneID:176661 KEGG:cel:CELE_Y49E10.1 UCSC:Y49E10.1 CTD:176661
WormBase:Y49E10.1 InParanoid:Q9XTT9 OMA:IDDQIRE NextBio:893504
Uniprot:Q9XTT9
Length = 416
Score = 396 (144.5 bits), Expect = 5.2e-41, Sum P(2) = 5.2e-41
Identities = 77/158 (48%), Positives = 105/158 (66%)
Query: 15 FIRVVGSEFVQKYLGEGPRMVRDVFRLAKENSPXXXXXXXXXXXXTKRFDAQTGADREVQ 74
FIRV GSE VQK++GEG RMVR++F +A+E++P + R + +G D EVQ
Sbjct: 221 FIRVSGSELVQKFIGEGARMVRELFVMAREHAPSIIFMDEIDSIGSSRVEGSSGGDSEVQ 280
Query: 75 RILLELLNQMDGFDQTTNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLVFS 134
R +LELLNQ+DGF+ T N+KVIMATNR D LDPALLRPGR+DRKIEFP PD + + +
Sbjct: 281 RTMLELLNQLDGFEATKNIKVIMATNRIDILDPALLRPGRIDRKIEFPAPDEKARADILK 340
Query: 135 TITAKMNLSDEVDLEDYVARPDRISGADINAICQEVIM 172
+ KMNL +++ + SGA++ ++C E M
Sbjct: 341 IHSRKMNLMRGINMAKIAEQIPGASGAEVKSVCTEAGM 378
Score = 245 (91.3 bits), Expect = 3.4e-19, P = 3.4e-19
Identities = 49/102 (48%), Positives = 66/102 (64%)
Query: 223 NLQVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLVFSTITAKMNLSDEVDLEDY 282
N++VIMATNR D LDPALLRPGR+DRKIEFP PD + + + + KMNL +++
Sbjct: 298 NIKVIMATNRIDILDPALLRPGRIDRKIEFPAPDEKARADILKIHSRKMNLMRGINMAKI 357
Query: 283 VARPDRISGADINAICQEAGMHAVRENRYIVLPKDFEKGYKK 324
+ SGA++ ++C EAGM A+RE R V +DFE K
Sbjct: 358 AEQIPGASGAEVKSVCTEAGMFALRERRIHVTQEDFEMAVGK 399
Score = 163 (62.4 bits), Expect = 5.3e-11, Sum P(2) = 5.3e-11
Identities = 32/58 (55%), Positives = 40/58 (68%)
Query: 169 EVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLVFSTITAKMNFMLNIGNLQV 226
+VIMATNR D LDPALLRPGR+DRKIEFP PD + + + + KMN M I ++
Sbjct: 300 KVIMATNRIDILDPALLRPGRIDRKIEFPAPDEKARADILKIHSRKMNLMRGINMAKI 357
Score = 56 (24.8 bits), Expect = 5.2e-41, Sum P(2) = 5.2e-41
Identities = 13/33 (39%), Positives = 18/33 (54%)
Query: 326 AGMHAVRENRYIVLPKDFEKGYKNNTKKDESEH 358
AGM A+RE R V +DFE +KD ++
Sbjct: 376 AGMFALRERRIHVTQEDFEMAVGKVMQKDSEKN 408
>UNIPROTKB|J9NWB0 [details] [associations]
symbol:J9NWB0 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0030163 "protein catabolic process" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR005937 Pfam:PF00004 SMART:SM00382 GO:GO:0005524
GO:GO:0005737 GO:GO:0030163 GO:GO:0017111 TIGRFAMs:TIGR01242
GeneTree:ENSGT00550000074818 EMBL:AAEX03014432
Ensembl:ENSCAFT00000039483 OMA:AGSELIQ Uniprot:J9NWB0
Length = 436
Score = 395 (144.1 bits), Expect = 6.6e-41, Sum P(2) = 6.6e-41
Identities = 79/160 (49%), Positives = 112/160 (70%)
Query: 15 FIRVVGSEFVQKYLGEGPRMVRDVFRLAKENSPXXXXXXXXXXXXTKRFDAQTGADREVQ 74
F+RV GSE +QKYLG+GP++VR+ FR+A+E++P T+R+D+ +G +RE+Q
Sbjct: 245 FLRVAGSELIQKYLGDGPKVVRESFRVAEEHAPSIVFIDEIDAIGTRRYDSNSGGEREIQ 304
Query: 75 RILLELLNQMDGFDQTTNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLVFS 134
R +LELLNQ+DGFD +VKVIMATNR TLDPAL L ++ PLPD + K+ +F
Sbjct: 305 RTMLELLNQLDGFDSRGDVKVIMATNRIKTLDPALSHQAALTGRLS-PLPDEKTKKHIFQ 363
Query: 135 TITAKMNLSDEVDLEDYVARPDRISGADINAICQEV-IMA 173
T++M L+D+V L+ +A+ D +SGADI AIC E +MA
Sbjct: 364 IHTSRMTLADDVTLDLIMAKDD-LSGADIKAICTEAGLMA 402
Score = 225 (84.3 bits), Expect = 1.9e-16, P = 1.9e-16
Identities = 52/111 (46%), Positives = 73/111 (65%)
Query: 222 GNLQVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLVFSTITAKMNLSDEVDLED 281
G+++VIMATNR TLDPAL L ++ PLPD + K+ +F T++M L+D+V L+
Sbjct: 321 GDVKVIMATNRIKTLDPALSHQAALTGRLS-PLPDEKTKKHIFQIHTSRMTLADDVTLDL 379
Query: 282 YVARPDRISGADINAICQEAGMHAVRENRYIVLPKDFEKG-----YKKCAG 327
+A+ D +SGADI AIC EAG+ A+RE+R V +DF+K YKK G
Sbjct: 380 IMAKDD-LSGADIKAICTEAGLMALREHRMKVTNEDFKKSKENVLYKKQEG 429
Score = 109 (43.4 bits), Expect = 9.6e-05, Sum P(2) = 9.6e-05
Identities = 26/61 (42%), Positives = 37/61 (60%)
Query: 169 EVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLVFSTITAKMNFMLNIGNLQVIM 228
+VIMATNR TLDPAL L ++ PLPD + K+ +F T++M ++ L +IM
Sbjct: 324 KVIMATNRIKTLDPALSHQAALTGRLS-PLPDEKTKKHIFQIHTSRMTLADDV-TLDLIM 381
Query: 229 A 229
A
Sbjct: 382 A 382
Score = 56 (24.8 bits), Expect = 6.6e-41, Sum P(2) = 6.6e-41
Identities = 15/35 (42%), Positives = 21/35 (60%)
Query: 326 AGMHAVRENRYIVLPKDFEKGYKNNT-KKDESEHE 359
AG+ A+RE+R V +DF+K +N KK E E
Sbjct: 398 AGLMALREHRMKVTNEDFKKSKENVLYKKQEGTPE 432
>FB|FBgn0020369 [details] [associations]
symbol:Rpt6 "Regulatory particle triple-A ATPase 6"
species:7227 "Drosophila melanogaster" [GO:0005634 "nucleus"
evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0004175
"endopeptidase activity" evidence=IDA;NAS] [GO:0008540 "proteasome
regulatory particle, base subcomplex" evidence=ISS;NAS] [GO:0005838
"proteasome regulatory particle" evidence=ISS;IDA;NAS] [GO:0000502
"proteasome complex" evidence=NAS] [GO:0006511 "ubiquitin-dependent
protein catabolic process" evidence=NAS] [GO:0006508 "proteolysis"
evidence=ISS;IDA;NAS] [GO:0016887 "ATPase activity" evidence=NAS]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0030163 "protein
catabolic process" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005875
"microtubule associated complex" evidence=IDA] [GO:0006974
"response to DNA damage stimulus" evidence=IMP] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GO:GO:0005634 GO:GO:0005737 GO:GO:0005875 EMBL:AE014298
GO:GO:0006508 GO:GO:0006974 GO:GO:0016887 GO:GO:0004175
GO:GO:0030163 eggNOG:COG1222 TIGRFAMs:TIGR01242 GO:GO:0008540
BRENDA:3.4.25.1 KO:K03066 OMA:QNIKVIM GeneTree:ENSGT00550000074947
EMBL:U97538 EMBL:AF043734 EMBL:AY051732 RefSeq:NP_608447.1
UniGene:Dm.2162 ProteinModelPortal:O18413 SMR:O18413 DIP:DIP-20087N
IntAct:O18413 MINT:MINT-759582 STRING:O18413 PaxDb:O18413
PRIDE:O18413 EnsemblMetazoa:FBtr0077189 GeneID:33105
KEGG:dme:Dmel_CG1489 CTD:33105 FlyBase:FBgn0020369
InParanoid:O18413 OrthoDB:EOG47D7XJ PhylomeDB:O18413
GenomeRNAi:33105 NextBio:781933 Bgee:O18413 GermOnline:CG1489
Uniprot:O18413
Length = 405
Score = 388 (141.6 bits), Expect = 8.4e-41, Sum P(2) = 8.4e-41
Identities = 77/158 (48%), Positives = 104/158 (65%)
Query: 15 FIRVVGSEFVQKYLGEGPRMVRDVFRLAKENSPXXXXXXXXXXXXTKRFDAQTGADREVQ 74
FIRV GSE VQK++GEG RMVR++F +A+E++P + R ++ +G D EVQ
Sbjct: 210 FIRVSGSELVQKFIGEGSRMVRELFVMAREHAPSIIFMDEIDSIGSSRIESGSGGDSEVQ 269
Query: 75 RILLELLNQMDGFDQTTNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLVFS 134
R +LELLNQ+DGF+ T N+KVIMATNR D LDPALLRPGR+DRKIEFP P+ + +
Sbjct: 270 RTMLELLNQLDGFEATKNIKVIMATNRIDILDPALLRPGRIDRKIEFPPPNEEARLDILK 329
Query: 135 TITAKMNLSDEVDLEDYVARPDRISGADINAICQEVIM 172
+ KMNL+ ++L SGA++ +C E M
Sbjct: 330 IHSRKMNLTRGINLRKIAELMPGASGAEVKGVCTEAGM 367
Score = 241 (89.9 bits), Expect = 1.1e-18, P = 1.1e-18
Identities = 49/102 (48%), Positives = 65/102 (63%)
Query: 223 NLQVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLVFSTITAKMNLSDEVDLEDY 282
N++VIMATNR D LDPALLRPGR+DRKIEFP P+ + + + KMNL+ ++L
Sbjct: 287 NIKVIMATNRIDILDPALLRPGRIDRKIEFPPPNEEARLDILKIHSRKMNLTRGINLRKI 346
Query: 283 VARPDRISGADINAICQEAGMHAVRENRYIVLPKDFEKGYKK 324
SGA++ +C EAGM+A+RE R V +DFE K
Sbjct: 347 AELMPGASGAEVKGVCTEAGMYALRERRVHVTQEDFEMAVAK 388
Score = 150 (57.9 bits), Expect = 3.8e-10, Sum P(2) = 3.8e-10
Identities = 33/59 (55%), Positives = 40/59 (67%)
Query: 169 EVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLVFSTITAKMNFMLNIGNLQVI 227
+VIMATNR D LDPALLRPGR+DRKIEFP P+ + + + KMN I NL+ I
Sbjct: 289 KVIMATNRIDILDPALLRPGRIDRKIEFPPPNEEARLDILKIHSRKMNLTRGI-NLRKI 346
Score = 62 (26.9 bits), Expect = 8.4e-41, Sum P(2) = 8.4e-41
Identities = 15/39 (38%), Positives = 21/39 (53%)
Query: 320 KGYKKCAGMHAVRENRYIVLPKDFEKGYKNNTKKDESEH 358
KG AGM+A+RE R V +DFE +KD ++
Sbjct: 359 KGVCTEAGMYALRERRVHVTQEDFEMAVAKVMQKDSEKN 397
>POMBASE|SPBC23G7.12c [details] [associations]
symbol:rpt6 "19S proteasome regulatory subunit Rpt6
(predicted)" species:4896 "Schizosaccharomyces pombe" [GO:0004175
"endopeptidase activity" evidence=ISO] [GO:0005524 "ATP binding"
evidence=ISM] [GO:0005634 "nucleus" evidence=IDA] [GO:0005635
"nuclear envelope" evidence=IDA] [GO:0005829 "cytosol"
evidence=IDA] [GO:0006511 "ubiquitin-dependent protein catabolic
process" evidence=ISO] [GO:0007346 "regulation of mitotic cell
cycle" evidence=IC] [GO:0008540 "proteasome regulatory particle,
base subcomplex" evidence=ISO] [GO:0016887 "ATPase activity"
evidence=ISO] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 PomBase:SPBC23G7.12c GO:GO:0005829 GO:GO:0005524
GO:GO:0007346 GO:GO:0005635 EMBL:CU329671 GenomeReviews:CU329671_GR
GO:GO:0016887 GO:GO:0004175 GO:GO:0006511 eggNOG:COG1222
TIGRFAMs:TIGR01242 HOGENOM:HOG000225143 GO:GO:0008540 KO:K03066
OMA:TEILRIH EMBL:U02280 PIR:S45176 RefSeq:NP_595870.1
ProteinModelPortal:P41836 IntAct:P41836 STRING:P41836 PRIDE:P41836
EnsemblFungi:SPBC23G7.12c.1 GeneID:2540487 KEGG:spo:SPBC23G7.12c
OrthoDB:EOG44N21J NextBio:20801614 Uniprot:P41836
Length = 403
Score = 391 (142.7 bits), Expect = 2.2e-40, Sum P(2) = 2.2e-40
Identities = 79/159 (49%), Positives = 105/159 (66%)
Query: 15 FIRVVGSEFVQKYLGEGPRMVRDVFRLAKENSPXXXXXXXXXXXXTKRFDAQTGA-DREV 73
FIRV GSE VQKY+GEG RMVR++F +A+E++P + R D+ G+ D EV
Sbjct: 207 FIRVSGSELVQKYIGEGSRMVRELFVMAREHAPSIIFMDEIDSIGSSRSDSSGGSGDSEV 266
Query: 74 QRILLELLNQMDGFDQTTNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLVF 133
QR +LELLNQ+DGF+ T N+KVIMATNR D LDPALLRPGR+DRKIEFP P + +
Sbjct: 267 QRTMLELLNQLDGFEATKNIKVIMATNRIDILDPALLRPGRIDRKIEFPPPSAEARAEIL 326
Query: 134 STITAKMNLSDEVDLEDYVARPDRISGADINAICQEVIM 172
+ MNL+ +DL+ + + SGA++ +C E M
Sbjct: 327 RIHSRSMNLTRGIDLKSIAEKMNGASGAELKGVCTEAGM 365
Score = 243 (90.6 bits), Expect = 5.7e-19, P = 5.7e-19
Identities = 49/102 (48%), Positives = 65/102 (63%)
Query: 223 NLQVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLVFSTITAKMNLSDEVDLEDY 282
N++VIMATNR D LDPALLRPGR+DRKIEFP P + + + MNL+ +DL+
Sbjct: 285 NIKVIMATNRIDILDPALLRPGRIDRKIEFPPPSAEARAEILRIHSRSMNLTRGIDLKSI 344
Query: 283 VARPDRISGADINAICQEAGMHAVRENRYIVLPKDFEKGYKK 324
+ + SGA++ +C EAGM A+RE R V +DFE K
Sbjct: 345 AEKMNGASGAELKGVCTEAGMFALRERRVHVTQEDFELAVAK 386
Score = 140 (54.3 bits), Expect = 2.9e-08, Sum P(2) = 2.9e-08
Identities = 29/53 (54%), Positives = 34/53 (64%)
Query: 169 EVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLVFSTITAKMNFMLNI 221
+VIMATNR D LDPALLRPGR+DRKIEFP P + + + MN I
Sbjct: 287 KVIMATNRIDILDPALLRPGRIDRKIEFPPPSAEARAEILRIHSRSMNLTRGI 339
Score = 55 (24.4 bits), Expect = 2.2e-40, Sum P(2) = 2.2e-40
Identities = 18/44 (40%), Positives = 20/44 (45%)
Query: 320 KGYKKCAGMHAVRENRYIVLPKDFEKGY-KNNTKKDESEHEFYK 362
KG AGM A+RE R V +DFE K K D E K
Sbjct: 357 KGVCTEAGMFALRERRVHVTQEDFELAVAKVLNKGDSGEMSLQK 400
>DICTYBASE|DDB_G0276917 [details] [associations]
symbol:psmC2 "26S proteasome ATPase 2 subunit"
species:44689 "Dictyostelium discoideum" [GO:0045335 "phagocytic
vesicle" evidence=IDA] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0016887 "ATPase activity" evidence=ISS] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=ISS]
[GO:0006200 "ATP catabolic process" evidence=ISS] [GO:0000502
"proteasome complex" evidence=IEA;ISS] [GO:0005634 "nucleus"
evidence=IEA] [GO:0044351 "macropinocytosis" evidence=RCA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
dictyBase:DDB_G0276917 GO:GO:0005524 GO:GO:0005634 GO:GO:0045335
GenomeReviews:CM000151_GR GO:GO:0016887 GO:GO:0000502 GO:GO:0006511
HSSP:Q9WZ49 EMBL:AAFI02000019 eggNOG:COG1222 TIGRFAMs:TIGR01242
KO:K03061 RefSeq:XP_642830.1 ProteinModelPortal:Q86JA1
STRING:Q86JA1 PRIDE:Q86JA1 EnsemblProtists:DDB0232966
GeneID:8620693 KEGG:ddi:DDB_G0276917 OMA:HIFTIHA
ProtClustDB:CLSZ2429177 Uniprot:Q86JA1
Length = 428
Score = 395 (144.1 bits), Expect = 3.6e-40, Sum P(2) = 3.6e-40
Identities = 87/167 (52%), Positives = 111/167 (66%)
Query: 14 AFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENSPXXXXXXXXXXXXTKRFDAQTGADREV 73
AF+RV+GSE VQKY+GEG RMVRD+F++A+ RFD G D EV
Sbjct: 231 AFVRVIGSELVQKYVGEGARMVRDLFQMARSKKACIIFFDEVDAIGGARFDDGAGGDNEV 290
Query: 74 QRILLELLNQMDGFDQTTNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLVF 133
QR +LEL+NQ+DGFD N+KV+MATNR DTLDPALLRPGRLDRK+EF LPD + +F
Sbjct: 291 QRTMLELINQLDGFDPRGNIKVLMATNRPDTLDPALLRPGRLDRKVEFGLPDLEGRAHIF 350
Query: 134 STITAK-MNLSDEVDLEDYVAR--PDRISGADINAICQEVIMATNRA 177
TI AK M+ + ++ E +AR P+ +GADI ++C E M RA
Sbjct: 351 -TIHAKTMSCARDIRFE-LLARLCPNS-TGADIRSVCTEAGMFAIRA 394
Score = 246 (91.7 bits), Expect = 2.8e-19, P = 2.8e-19
Identities = 57/112 (50%), Positives = 76/112 (67%)
Query: 222 GNLQVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLVFSTITAK-MNLSDEVDLE 280
GN++V+MATNR DTLDPALLRPGRLDRK+EF LPD + +F TI AK M+ + ++ E
Sbjct: 308 GNIKVLMATNRPDTLDPALLRPGRLDRKVEFGLPDLEGRAHIF-TIHAKTMSCARDIRFE 366
Query: 281 DYVAR--PDRISGADINAICQEAGMHAVRENRYIVLPKDFEKGYKKCAGMHA 330
+AR P+ +GADI ++C EAGM A+R R +V KDF + K +A
Sbjct: 367 -LLARLCPNS-TGADIRSVCTEAGMFAIRARRKVVSEKDFLEAIDKVIKSYA 416
Score = 153 (58.9 bits), Expect = 4.6e-09, Sum P(2) = 4.6e-09
Identities = 32/46 (69%), Positives = 37/46 (80%)
Query: 169 EVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLVFSTITAK 214
+V+MATNR DTLDPALLRPGRLDRK+EF LPD + +F TI AK
Sbjct: 311 KVLMATNRPDTLDPALLRPGRLDRKVEFGLPDLEGRAHIF-TIHAK 355
Score = 49 (22.3 bits), Expect = 3.6e-40, Sum P(2) = 3.6e-40
Identities = 10/18 (55%), Positives = 12/18 (66%)
Query: 326 AGMHAVRENRYIVLPKDF 343
AGM A+R R +V KDF
Sbjct: 387 AGMFAIRARRKVVSEKDF 404
>WB|WBGene00018991 [details] [associations]
symbol:F56F11.4 species:6239 "Caenorhabditis elegans"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0030163 "protein
catabolic process" evidence=IEA] [GO:0006281 "DNA repair"
evidence=IEA] [GO:0006310 "DNA recombination" evidence=IEA]
[GO:0009378 "four-way junction helicase activity" evidence=IEA]
[GO:0016887 "ATPase activity" evidence=IEA] [GO:0009792 "embryo
development ending in birth or egg hatching" evidence=IMP]
[GO:0002119 "nematode larval development" evidence=IMP] [GO:0040007
"growth" evidence=IMP] [GO:0000003 "reproduction" evidence=IMP]
[GO:0040035 "hermaphrodite genitalia development" evidence=IMP]
[GO:0040011 "locomotion" evidence=IMP] [GO:0040017 "positive
regulation of locomotion" evidence=IMP] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GO:GO:0009792 GO:GO:0005737 GO:GO:0040007 GO:GO:0002119
GO:GO:0040011 GO:GO:0040017 GO:GO:0040035 GO:GO:0030163 HSSP:Q01853
GO:GO:0017111 eggNOG:COG1222 TIGRFAMs:TIGR01242
HOGENOM:HOG000225143 KO:K03066 GeneTree:ENSGT00550000074947
EMBL:FO081497 RefSeq:NP_741098.1 ProteinModelPortal:Q8MXF1
SMR:Q8MXF1 STRING:Q8MXF1 PaxDb:Q8MXF1 PRIDE:Q8MXF1
EnsemblMetazoa:F56F11.4b GeneID:175403 KEGG:cel:CELE_F56F11.4
UCSC:F56F11.4b CTD:175403 WormBase:F56F11.4b InParanoid:Q8MXF1
OMA:TITISEN NextBio:888008 ArrayExpress:Q8MXF1 Uniprot:Q8MXF1
Length = 432
Score = 388 (141.6 bits), Expect = 3.6e-40, Sum P(2) = 3.6e-40
Identities = 76/158 (48%), Positives = 103/158 (65%)
Query: 15 FIRVVGSEFVQKYLGEGPRMVRDVFRLAKENSPXXXXXXXXXXXXTKRFDAQTGADREVQ 74
FIRV GSE VQK++GEG RMVR++F +A+E++P + R + G D EVQ
Sbjct: 237 FIRVSGSELVQKFIGEGARMVRELFVMAREHAPSIIFMDEIDSIGSSRVEGSRGGDSEVQ 296
Query: 75 RILLELLNQMDGFDQTTNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLVFS 134
R +LELLNQ+DGF+ T N+KVIMATNR D LD ALLRPGR+DRKIEFP PD + + +
Sbjct: 297 RTMLELLNQLDGFEATKNIKVIMATNRIDILDSALLRPGRIDRKIEFPAPDEKARAQILK 356
Query: 135 TITAKMNLSDEVDLEDYVARPDRISGADINAICQEVIM 172
+ KMNL + ++ + SGA++ ++C E M
Sbjct: 357 IHSRKMNLMRGIRMDKIAEQIPGASGAEVKSVCTEAGM 394
Score = 239 (89.2 bits), Expect = 2.9e-18, P = 2.9e-18
Identities = 48/102 (47%), Positives = 65/102 (63%)
Query: 223 NLQVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLVFSTITAKMNLSDEVDLEDY 282
N++VIMATNR D LD ALLRPGR+DRKIEFP PD + + + + KMNL + ++
Sbjct: 314 NIKVIMATNRIDILDSALLRPGRIDRKIEFPAPDEKARAQILKIHSRKMNLMRGIRMDKI 373
Query: 283 VARPDRISGADINAICQEAGMHAVRENRYIVLPKDFEKGYKK 324
+ SGA++ ++C EAGM A+RE R V +DFE K
Sbjct: 374 AEQIPGASGAEVKSVCTEAGMFALRERRIHVTQEDFEMAVGK 415
Score = 156 (60.0 bits), Expect = 4.1e-10, Sum P(2) = 4.1e-10
Identities = 31/53 (58%), Positives = 37/53 (69%)
Query: 169 EVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLVFSTITAKMNFMLNI 221
+VIMATNR D LD ALLRPGR+DRKIEFP PD + + + + KMN M I
Sbjct: 316 KVIMATNRIDILDSALLRPGRIDRKIEFPAPDEKARAQILKIHSRKMNLMRGI 368
Score = 56 (24.8 bits), Expect = 3.6e-40, Sum P(2) = 3.6e-40
Identities = 13/33 (39%), Positives = 18/33 (54%)
Query: 326 AGMHAVRENRYIVLPKDFEKGYKNNTKKDESEH 358
AGM A+RE R V +DFE +KD ++
Sbjct: 392 AGMFALRERRIHVTQEDFEMAVGKVMQKDSEKN 424
>TAIR|locus:2024822 [details] [associations]
symbol:RPT1A "regulatory particle triple-A 1A"
species:3702 "Arabidopsis thaliana" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISM;TAS] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0016887 "ATPase activity" evidence=IGI;ISS] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=TAS]
[GO:0005886 "plasma membrane" evidence=IDA] [GO:0000502 "proteasome
complex" evidence=IDA] [GO:0005829 "cytosol" evidence=IDA]
[GO:0008540 "proteasome regulatory particle, base subcomplex"
evidence=IDA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005829
GO:GO:0005886 GO:GO:0005524 GO:GO:0005634 GO:GO:0030163
GO:GO:0000502 GO:GO:0017111 EMBL:AC009324 EMBL:AC024260
eggNOG:COG1222 TIGRFAMs:TIGR01242 HOGENOM:HOG000225143
EMBL:AF123390 EMBL:AY062860 EMBL:BT000069 IPI:IPI00548766
PIR:G96577 RefSeq:NP_175778.1 UniGene:At.66918
ProteinModelPortal:Q9SSB5 SMR:Q9SSB5 IntAct:Q9SSB5 STRING:Q9SSB5
PaxDb:Q9SSB5 PRIDE:Q9SSB5 EnsemblPlants:AT1G53750.1 GeneID:841812
KEGG:ath:AT1G53750 GeneFarm:2748 TAIR:At1g53750 InParanoid:Q9SSB5
KO:K03061 OMA:DIRWELI PhylomeDB:Q9SSB5 ProtClustDB:CLSN2682130
Genevestigator:Q9SSB5 GermOnline:AT1G53750 Uniprot:Q9SSB5
Length = 426
Score = 394 (143.8 bits), Expect = 4.6e-40, Sum P(2) = 4.6e-40
Identities = 85/178 (47%), Positives = 109/178 (61%)
Query: 2 LLCTSFDTELVTAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENSPXXXXXXXXXXXXTK 61
LL + FIRV+GSE VQKY+GEG RMVR++F++A+
Sbjct: 217 LLARAVANRTDACFIRVIGSELVQKYVGEGARMVRELFQMARSKKACIVFFDEVDAIGGA 276
Query: 62 RFDAQTGADREVQRILLELLNQMDGFDQTTNVKVIMATNRADTLDPALLRPGRLDRKIEF 121
RFD G D EVQR +LE++NQ+DGFD N+KV+MATNR DTLDPALLRPGRLDRK+EF
Sbjct: 277 RFDDGVGGDNEVQRTMLEIVNQLDGFDARGNIKVLMATNRPDTLDPALLRPGRLDRKVEF 336
Query: 122 PLPDRRQKRLVFSTITAKMNLSDEVDLEDYVAR--PDRISGADINAICQEVIMATNRA 177
LPD + +F T MN ++ E +AR P+ +GADI ++C E M RA
Sbjct: 337 GLPDLESRTQIFKIHTRTMNCERDIRFE-LLARLCPNS-TGADIRSVCTEAGMYAIRA 392
Score = 252 (93.8 bits), Expect = 2.9e-20, P = 2.9e-20
Identities = 53/99 (53%), Positives = 68/99 (68%)
Query: 222 GNLQVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLVFSTITAKMNLSDEVDLED 281
GN++V+MATNR DTLDPALLRPGRLDRK+EF LPD + +F T MN ++ E
Sbjct: 306 GNIKVLMATNRPDTLDPALLRPGRLDRKVEFGLPDLESRTQIFKIHTRTMNCERDIRFE- 364
Query: 282 YVAR--PDRISGADINAICQEAGMHAVRENRYIVLPKDF 318
+AR P+ +GADI ++C EAGM+A+R R V KDF
Sbjct: 365 LLARLCPNS-TGADIRSVCTEAGMYAIRARRKTVTEKDF 402
Score = 159 (61.0 bits), Expect = 9.1e-10, Sum P(2) = 9.1e-10
Identities = 31/48 (64%), Positives = 36/48 (75%)
Query: 169 EVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLVFSTITAKMN 216
+V+MATNR DTLDPALLRPGRLDRK+EF LPD + +F T MN
Sbjct: 309 KVLMATNRPDTLDPALLRPGRLDRKVEFGLPDLESRTQIFKIHTRTMN 356
Score = 49 (22.3 bits), Expect = 4.6e-40, Sum P(2) = 4.6e-40
Identities = 10/18 (55%), Positives = 12/18 (66%)
Query: 326 AGMHAVRENRYIVLPKDF 343
AGM+A+R R V KDF
Sbjct: 385 AGMYAIRARRKTVTEKDF 402
>CGD|CAL0006022 [details] [associations]
symbol:RPT6 species:5476 "Candida albicans" [GO:0005635
"nuclear envelope" evidence=IEA] [GO:0008540 "proteasome regulatory
particle, base subcomplex" evidence=IEA] [GO:0034515 "proteasome
storage granule" evidence=IEA] [GO:0019904 "protein domain specific
binding" evidence=IEA] [GO:0070682 "proteasome regulatory particle
assembly" evidence=IEA] [GO:0032968 "positive regulation of
transcription elongation from RNA polymerase II promoter"
evidence=IEA] [GO:0043161 "proteasomal ubiquitin-dependent protein
catabolic process" evidence=IEA] [GO:0051091 "positive regulation
of sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0006338 "chromatin remodeling" evidence=IEA]
[GO:0045899 "positive regulation of RNA polymerase II
transcriptional preinitiation complex assembly" evidence=IEA]
[GO:0043433 "negative regulation of sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0006289
"nucleotide-excision repair" evidence=IEA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 CGD:CAL0006022
GO:GO:0005524 GO:GO:0005737 GO:GO:0030163 GO:GO:0017111
EMBL:AACQ01000103 eggNOG:COG1222 TIGRFAMs:TIGR01242 KO:K03066
RefSeq:XP_714440.1 ProteinModelPortal:Q59Y56 STRING:Q59Y56
GeneID:3643877 KEGG:cal:CaO19.3593 Uniprot:Q59Y56
Length = 401
Score = 385 (140.6 bits), Expect = 5.8e-40, Sum P(2) = 5.8e-40
Identities = 75/158 (47%), Positives = 103/158 (65%)
Query: 15 FIRVVGSEFVQKYLGEGPRMVRDVFRLAKENSPXXXXXXXXXXXXTKRFDAQTGADREVQ 74
FIRV GSE VQKY+GEG RMVR++F +A+E++P + R + +G D EVQ
Sbjct: 206 FIRVSGSELVQKYIGEGSRMVRELFVMAREHAPSIIFMDEIDSIGSSRVEGSSGGDSEVQ 265
Query: 75 RILLELLNQMDGFDQTTNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLVFS 134
R +LELLNQ+DGF+ + ++K+IMATNR D LDPALLRPGR+DRKIEFP P + +
Sbjct: 266 RTMLELLNQLDGFESSKDIKIIMATNRLDILDPALLRPGRIDRKIEFPAPTVAARTDILK 325
Query: 135 TITAKMNLSDEVDLEDYVARPDRISGADINAICQEVIM 172
+ MNL+ ++L + + SGAD+ +C E M
Sbjct: 326 IHSRSMNLTRGINLRKIAEKMNGCSGADVKGVCTEAGM 363
Score = 236 (88.1 bits), Expect = 5.3e-18, P = 5.3e-18
Identities = 47/102 (46%), Positives = 65/102 (63%)
Query: 223 NLQVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLVFSTITAKMNLSDEVDLEDY 282
++++IMATNR D LDPALLRPGR+DRKIEFP P + + + MNL+ ++L
Sbjct: 283 DIKIIMATNRLDILDPALLRPGRIDRKIEFPAPTVAARTDILKIHSRSMNLTRGINLRKI 342
Query: 283 VARPDRISGADINAICQEAGMHAVRENRYIVLPKDFEKGYKK 324
+ + SGAD+ +C EAGM+A+RE R V +DFE K
Sbjct: 343 AEKMNGCSGADVKGVCTEAGMYALRERRIHVTQEDFELAVAK 384
Score = 141 (54.7 bits), Expect = 1.3e-08, Sum P(2) = 1.3e-08
Identities = 31/59 (52%), Positives = 38/59 (64%)
Query: 169 EVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLVFSTITAKMNFMLNIGNLQVI 227
++IMATNR D LDPALLRPGR+DRKIEFP P + + + MN I NL+ I
Sbjct: 285 KIIMATNRLDILDPALLRPGRIDRKIEFPAPTVAARTDILKIHSRSMNLTRGI-NLRKI 342
Score = 57 (25.1 bits), Expect = 5.8e-40, Sum P(2) = 5.8e-40
Identities = 16/37 (43%), Positives = 21/37 (56%)
Query: 320 KGYKKCAGMHAVRENRYIVLPKDFEKGY-KNNTKKDE 355
KG AGM+A+RE R V +DFE K +K D+
Sbjct: 355 KGVCTEAGMYALRERRIHVTQEDFELAVAKVMSKNDD 391
>SGD|S000003016 [details] [associations]
symbol:RPT6 "ATPase of the 19S regulatory particle of the 26S
proteasome" species:4932 "Saccharomyces cerevisiae" [GO:0034515
"proteasome storage granule" evidence=IDA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0006338
"chromatin remodeling" evidence=IMP] [GO:0005634 "nucleus"
evidence=IEA;IDA] [GO:0008540 "proteasome regulatory particle, base
subcomplex" evidence=IDA] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
[GO:0030163 "protein catabolic process" evidence=IEA] [GO:0070682
"proteasome regulatory particle assembly" evidence=IMP] [GO:0032968
"positive regulation of transcription elongation from RNA
polymerase II promoter" evidence=IMP] [GO:0045899 "positive
regulation of RNA polymerase II transcriptional preinitiation
complex assembly" evidence=IGI;IMP] [GO:0016887 "ATPase activity"
evidence=ISS] [GO:0019904 "protein domain specific binding"
evidence=IDA] [GO:0043161 "proteasomal ubiquitin-dependent protein
catabolic process" evidence=IPI] [GO:0006289 "nucleotide-excision
repair" evidence=IGI] [GO:0051091 "positive regulation of
sequence-specific DNA binding transcription factor activity"
evidence=IMP] [GO:0043433 "negative regulation of sequence-specific
DNA binding transcription factor activity" evidence=IMP]
[GO:0000502 "proteasome complex" evidence=IEA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 SGD:S000003016
GO:GO:0005524 GO:GO:0005634 GO:GO:0019904 GO:GO:0051091
GO:GO:0043161 EMBL:BK006941 GO:GO:0016887 GO:GO:0006338
GO:GO:0043433 GO:GO:0045899 GO:GO:0006289 GO:GO:0032968
GO:GO:0070682 eggNOG:COG1222 TIGRFAMs:TIGR01242 GO:GO:0034515
HOGENOM:HOG000225143 GO:GO:0008540 PDB:4B4T PDBsum:4B4T KO:K03066
OMA:TEILRIH GeneTree:ENSGT00550000074947 OrthoDB:EOG44N21J
EMBL:X66400 EMBL:L01626 EMBL:Z72570 EMBL:AY693135 PIR:S64052
RefSeq:NP_011467.1 ProteinModelPortal:Q01939 SMR:Q01939
DIP:DIP-979N IntAct:Q01939 MINT:MINT-568023 STRING:Q01939
PaxDb:Q01939 PeptideAtlas:Q01939 EnsemblFungi:YGL048C GeneID:852834
KEGG:sce:YGL048C NextBio:972403 Genevestigator:Q01939
GermOnline:YGL048C Uniprot:Q01939
Length = 405
Score = 386 (140.9 bits), Expect = 7.4e-40, Sum P(2) = 7.4e-40
Identities = 76/158 (48%), Positives = 103/158 (65%)
Query: 15 FIRVVGSEFVQKYLGEGPRMVRDVFRLAKENSPXXXXXXXXXXXXTKRFDAQTGADREVQ 74
FIRV G+E VQKY+GEG RMVR++F +A+E++P + R + G D EVQ
Sbjct: 210 FIRVSGAELVQKYIGEGSRMVRELFVMAREHAPSIIFMDEIDSIGSTRVEGSGGGDSEVQ 269
Query: 75 RILLELLNQMDGFDQTTNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLVFS 134
R +LELLNQ+DGF+ + N+K+IMATNR D LDPALLRPGR+DRKIEFP P + +
Sbjct: 270 RTMLELLNQLDGFETSKNIKIIMATNRLDILDPALLRPGRIDRKIEFPPPSVAARAEILR 329
Query: 135 TITAKMNLSDEVDLEDYVARPDRISGADINAICQEVIM 172
+ KMNL+ ++L + + SGAD+ +C E M
Sbjct: 330 IHSRKMNLTRGINLRKVAEKMNGCSGADVKGVCTEAGM 367
Score = 244 (91.0 bits), Expect = 4.3e-19, P = 4.3e-19
Identities = 48/97 (49%), Positives = 65/97 (67%)
Query: 223 NLQVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLVFSTITAKMNLSDEVDLEDY 282
N+++IMATNR D LDPALLRPGR+DRKIEFP P + + + KMNL+ ++L
Sbjct: 287 NIKIIMATNRLDILDPALLRPGRIDRKIEFPPPSVAARAEILRIHSRKMNLTRGINLRKV 346
Query: 283 VARPDRISGADINAICQEAGMHAVRENRYIVLPKDFE 319
+ + SGAD+ +C EAGM+A+RE R V +DFE
Sbjct: 347 AEKMNGCSGADVKGVCTEAGMYALRERRIHVTQEDFE 383
Score = 144 (55.7 bits), Expect = 1.0e-08, Sum P(2) = 1.0e-08
Identities = 31/59 (52%), Positives = 39/59 (66%)
Query: 169 EVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLVFSTITAKMNFMLNIGNLQVI 227
++IMATNR D LDPALLRPGR+DRKIEFP P + + + KMN I NL+ +
Sbjct: 289 KIIMATNRLDILDPALLRPGRIDRKIEFPPPSVAARAEILRIHSRKMNLTRGI-NLRKV 346
Score = 55 (24.4 bits), Expect = 7.4e-40, Sum P(2) = 7.4e-40
Identities = 13/25 (52%), Positives = 16/25 (64%)
Query: 320 KGYKKCAGMHAVRENRYIVLPKDFE 344
KG AGM+A+RE R V +DFE
Sbjct: 359 KGVCTEAGMYALRERRIHVTQEDFE 383
>UNIPROTKB|F1NU79 [details] [associations]
symbol:PSMC5 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0008134 "transcription factor binding"
evidence=IEA] [GO:0022624 "proteasome accessory complex"
evidence=IEA] [GO:0031410 "cytoplasmic vesicle" evidence=IEA]
[GO:0031531 "thyrotropin-releasing hormone receptor binding"
evidence=IEA] [GO:0043161 "proteasomal ubiquitin-dependent protein
catabolic process" evidence=IEA] [GO:0045892 "negative regulation
of transcription, DNA-dependent" evidence=IEA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GO:GO:0005634 GO:GO:0045892 GO:GO:0043161 GO:GO:0031410
GO:GO:0017111 TIGRFAMs:TIGR01242 OMA:QNIKVIM
GeneTree:ENSGT00550000074947 EMBL:AADN02056696 IPI:IPI00574684
Ensembl:ENSGALT00000000469 Uniprot:F1NU79
Length = 412
Score = 379 (138.5 bits), Expect = 7.4e-40, Sum P(2) = 7.4e-40
Identities = 76/158 (48%), Positives = 102/158 (64%)
Query: 15 FIRVVGSEFVQKYLGEGPRMVRDVFRLAKENSPXXXXXXXXXXXXTKRFDAQTGADREVQ 74
FIRV GSE VQK++GEG RMVR++F +A+E++P + R + +G D EVQ
Sbjct: 217 FIRVSGSELVQKFIGEGARMVRELFVMAREHAPSIIFMDEIDSIGSSRLEGGSGGDSEVQ 276
Query: 75 RILLELLNQMDGFDQTTNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLVFS 134
R +LELLNQ+DGF+ T N+KVIMATNR D LD ALLRPGR+DRKIEFP P+ + +
Sbjct: 277 RTMLELLNQLDGFEATKNIKVIMATNRIDILDSALLRPGRIDRKIEFPPPNEEARLDILK 336
Query: 135 TITAKMNLSDEVDLEDYVARPDRISGADINAICQEVIM 172
+ KMNL+ ++L SGA++ +C E M
Sbjct: 337 IHSRKMNLTRGINLRKIAELMPGASGAEVKGVCTEAGM 374
Score = 233 (87.1 bits), Expect = 1.5e-17, P = 1.5e-17
Identities = 48/102 (47%), Positives = 64/102 (62%)
Query: 223 NLQVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLVFSTITAKMNLSDEVDLEDY 282
N++VIMATNR D LD ALLRPGR+DRKIEFP P+ + + + KMNL+ ++L
Sbjct: 294 NIKVIMATNRIDILDSALLRPGRIDRKIEFPPPNEEARLDILKIHSRKMNLTRGINLRKI 353
Query: 283 VARPDRISGADINAICQEAGMHAVRENRYIVLPKDFEKGYKK 324
SGA++ +C EAGM+A+RE R V +DFE K
Sbjct: 354 AELMPGASGAEVKGVCTEAGMYALRERRVHVTQEDFEMAVAK 395
Score = 142 (55.0 bits), Expect = 3.5e-09, Sum P(2) = 3.5e-09
Identities = 32/59 (54%), Positives = 39/59 (66%)
Query: 169 EVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLVFSTITAKMNFMLNIGNLQVI 227
+VIMATNR D LD ALLRPGR+DRKIEFP P+ + + + KMN I NL+ I
Sbjct: 296 KVIMATNRIDILDSALLRPGRIDRKIEFPPPNEEARLDILKIHSRKMNLTRGI-NLRKI 353
Score = 62 (26.9 bits), Expect = 7.4e-40, Sum P(2) = 7.4e-40
Identities = 15/39 (38%), Positives = 21/39 (53%)
Query: 320 KGYKKCAGMHAVRENRYIVLPKDFEKGYKNNTKKDESEH 358
KG AGM+A+RE R V +DFE +KD ++
Sbjct: 366 KGVCTEAGMYALRERRVHVTQEDFEMAVAKVMQKDSEKN 404
>UNIPROTKB|P62194 [details] [associations]
symbol:PSMC5 "26S protease regulatory subunit 8"
species:9913 "Bos taurus" [GO:0022624 "proteasome accessory
complex" evidence=ISS] [GO:0000502 "proteasome complex"
evidence=ISS] [GO:0043161 "proteasomal ubiquitin-dependent protein
catabolic process" evidence=ISS] [GO:0031531 "thyrotropin-releasing
hormone receptor binding" evidence=ISS] [GO:0008134 "transcription
factor binding" evidence=ISS] [GO:0005737 "cytoplasm" evidence=ISS]
[GO:0005634 "nucleus" evidence=ISS] [GO:0045892 "negative
regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0031410 "cytoplasmic vesicle" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737
GO:GO:0045892 GO:GO:0043161 GO:GO:0031410 GO:GO:0017111
GO:GO:0008134 eggNOG:COG1222 TIGRFAMs:TIGR01242 HOVERGEN:HBG000109
GO:GO:0022624 HOGENOM:HOG000225143 KO:K03066 OMA:QNIKVIM
EMBL:AF069053 EMBL:BC146195 IPI:IPI00717227 RefSeq:NP_776866.1
UniGene:Bt.8062 ProteinModelPortal:P62194 SMR:P62194 STRING:P62194
PRIDE:P62194 Ensembl:ENSBTAT00000028048 GeneID:282015
KEGG:bta:282015 CTD:5705 GeneTree:ENSGT00550000074947
InParanoid:P62194 OrthoDB:EOG4MKNGF NextBio:20805880
ArrayExpress:P62194 GO:GO:0031531 Uniprot:P62194
Length = 406
Score = 379 (138.5 bits), Expect = 7.4e-40, Sum P(2) = 7.4e-40
Identities = 76/158 (48%), Positives = 102/158 (64%)
Query: 15 FIRVVGSEFVQKYLGEGPRMVRDVFRLAKENSPXXXXXXXXXXXXTKRFDAQTGADREVQ 74
FIRV GSE VQK++GEG RMVR++F +A+E++P + R + +G D EVQ
Sbjct: 211 FIRVSGSELVQKFIGEGARMVRELFVMAREHAPSIIFMDEIDSIGSSRLEGGSGGDSEVQ 270
Query: 75 RILLELLNQMDGFDQTTNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLVFS 134
R +LELLNQ+DGF+ T N+KVIMATNR D LD ALLRPGR+DRKIEFP P+ + +
Sbjct: 271 RTMLELLNQLDGFEATKNIKVIMATNRIDILDSALLRPGRIDRKIEFPPPNEEARLDILK 330
Query: 135 TITAKMNLSDEVDLEDYVARPDRISGADINAICQEVIM 172
+ KMNL+ ++L SGA++ +C E M
Sbjct: 331 IHSRKMNLTRGINLRKIAELMPGASGAEVKGVCTEAGM 368
Score = 233 (87.1 bits), Expect = 1.4e-17, P = 1.4e-17
Identities = 48/102 (47%), Positives = 64/102 (62%)
Query: 223 NLQVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLVFSTITAKMNLSDEVDLEDY 282
N++VIMATNR D LD ALLRPGR+DRKIEFP P+ + + + KMNL+ ++L
Sbjct: 288 NIKVIMATNRIDILDSALLRPGRIDRKIEFPPPNEEARLDILKIHSRKMNLTRGINLRKI 347
Query: 283 VARPDRISGADINAICQEAGMHAVRENRYIVLPKDFEKGYKK 324
SGA++ +C EAGM+A+RE R V +DFE K
Sbjct: 348 AELMPGASGAEVKGVCTEAGMYALRERRVHVTQEDFEMAVAK 389
Score = 142 (55.0 bits), Expect = 3.3e-09, Sum P(2) = 3.3e-09
Identities = 32/59 (54%), Positives = 39/59 (66%)
Query: 169 EVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLVFSTITAKMNFMLNIGNLQVI 227
+VIMATNR D LD ALLRPGR+DRKIEFP P+ + + + KMN I NL+ I
Sbjct: 290 KVIMATNRIDILDSALLRPGRIDRKIEFPPPNEEARLDILKIHSRKMNLTRGI-NLRKI 347
Score = 62 (26.9 bits), Expect = 7.4e-40, Sum P(2) = 7.4e-40
Identities = 15/39 (38%), Positives = 21/39 (53%)
Query: 320 KGYKKCAGMHAVRENRYIVLPKDFEKGYKNNTKKDESEH 358
KG AGM+A+RE R V +DFE +KD ++
Sbjct: 360 KGVCTEAGMYALRERRVHVTQEDFEMAVAKVMQKDSEKN 398
>UNIPROTKB|P62195 [details] [associations]
symbol:PSMC5 "26S protease regulatory subunit 8"
species:9606 "Homo sapiens" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0017025 "TBP-class protein binding" evidence=IEA] [GO:0031595
"nuclear proteasome complex" evidence=IEA] [GO:0045892 "negative
regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0043161 "proteasomal ubiquitin-dependent protein catabolic
process" evidence=IDA] [GO:0000502 "proteasome complex"
evidence=IDA] [GO:0016887 "ATPase activity" evidence=TAS]
[GO:0031531 "thyrotropin-releasing hormone receptor binding"
evidence=IPI] [GO:0045893 "positive regulation of transcription,
DNA-dependent" evidence=NAS] [GO:0008134 "transcription factor
binding" evidence=IPI] [GO:0005634 "nucleus" evidence=IDA]
[GO:0005737 "cytoplasm" evidence=IDA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0043069 "negative regulation of programmed cell
death" evidence=NAS] [GO:0022624 "proteasome accessory complex"
evidence=ISS] [GO:0031410 "cytoplasmic vesicle" evidence=IDA]
[GO:0003712 "transcription cofactor activity" evidence=TAS]
[GO:0006366 "transcription from RNA polymerase II promoter"
evidence=TAS] [GO:0000075 "cell cycle checkpoint" evidence=TAS]
[GO:0000082 "G1/S transition of mitotic cell cycle" evidence=TAS]
[GO:0000084 "S phase of mitotic cell cycle" evidence=TAS]
[GO:0000209 "protein polyubiquitination" evidence=TAS] [GO:0000216
"M/G1 transition of mitotic cell cycle" evidence=TAS] [GO:0000278
"mitotic cell cycle" evidence=TAS] [GO:0002474 "antigen processing
and presentation of peptide antigen via MHC class I" evidence=TAS]
[GO:0002479 "antigen processing and presentation of exogenous
peptide antigen via MHC class I, TAP-dependent" evidence=TAS]
[GO:0005654 "nucleoplasm" evidence=TAS] [GO:0005829 "cytosol"
evidence=TAS] [GO:0006521 "regulation of cellular amino acid
metabolic process" evidence=TAS] [GO:0006915 "apoptotic process"
evidence=TAS] [GO:0006977 "DNA damage response, signal transduction
by p53 class mediator resulting in cell cycle arrest" evidence=TAS]
[GO:0010467 "gene expression" evidence=TAS] [GO:0016032 "viral
reproduction" evidence=TAS] [GO:0016070 "RNA metabolic process"
evidence=TAS] [GO:0016071 "mRNA metabolic process" evidence=TAS]
[GO:0031145 "anaphase-promoting complex-dependent proteasomal
ubiquitin-dependent protein catabolic process" evidence=TAS]
[GO:0034641 "cellular nitrogen compound metabolic process"
evidence=TAS] [GO:0042590 "antigen processing and presentation of
exogenous peptide antigen via MHC class I" evidence=TAS]
[GO:0042981 "regulation of apoptotic process" evidence=TAS]
[GO:0044281 "small molecule metabolic process" evidence=TAS]
[GO:0051436 "negative regulation of ubiquitin-protein ligase
activity involved in mitotic cell cycle" evidence=TAS] [GO:0051437
"positive regulation of ubiquitin-protein ligase activity involved
in mitotic cell cycle" evidence=TAS] [GO:0051439 "regulation of
ubiquitin-protein ligase activity involved in mitotic cell cycle"
evidence=TAS] [GO:0005730 "nucleolus" evidence=IDA]
Reactome:REACT_13505 Reactome:REACT_578 Reactome:REACT_71
Reactome:REACT_21257 Reactome:REACT_6850 Reactome:REACT_111217
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
EMBL:L38810 GO:GO:0005829 GO:GO:0005524 Reactome:REACT_111102
Reactome:REACT_116125 Reactome:REACT_6900 GO:GO:0006915
GO:GO:0016071 GO:GO:0045892 Reactome:REACT_115566 GO:GO:0045893
GO:GO:0005654 GO:GO:0002479 GO:GO:0016032 Reactome:REACT_21300
GO:GO:0006977 GO:GO:0042981 GO:GO:0000082 GO:GO:0031410
GO:GO:0016887 GO:GO:0006366 GO:GO:0043069 GO:GO:0051436
EMBL:CH471109 GO:GO:0003712 GO:GO:0000216 GO:GO:0000209
GO:GO:0000084 GO:GO:0031145 GO:GO:0051437 GO:GO:0006521
Reactome:REACT_383 EMBL:AC015651 ChiTaRS:PSMC5 eggNOG:COG1222
TIGRFAMs:TIGR01242 HOVERGEN:HBG000109 GO:GO:0022624 KO:K03066
OMA:QNIKVIM CTD:5705 OrthoDB:EOG4MKNGF EMBL:D44467 EMBL:AK290758
EMBL:AK291878 EMBL:BC001932 EMBL:BC002367 EMBL:AF035309
IPI:IPI00023919 PIR:S60343 PIR:S65536 RefSeq:NP_001186092.1
RefSeq:NP_002796.4 UniGene:Hs.79387 PDB:2KRK PDB:3KW6 PDBsum:2KRK
PDBsum:3KW6 ProteinModelPortal:P62195 SMR:P62195 IntAct:P62195
MINT:MINT-5004394 STRING:P62195 PhosphoSite:P62195 DMDM:49065819
PaxDb:P62195 PRIDE:P62195 DNASU:5705 Ensembl:ENST00000310144
Ensembl:ENST00000375812 Ensembl:ENST00000580864
Ensembl:ENST00000581882 GeneID:5705 KEGG:hsa:5705 UCSC:uc002jcb.3
GeneCards:GC17P061904 HGNC:HGNC:9552 HPA:HPA017871 MIM:601681
neXtProt:NX_P62195 PharmGKB:PA33897 InParanoid:P62195
PhylomeDB:P62195 EvolutionaryTrace:P62195 GenomeRNAi:5705
NextBio:22166 ArrayExpress:P62195 Bgee:P62195 CleanEx:HS_PSMC5
Genevestigator:P62195 GermOnline:ENSG00000087191 Uniprot:P62195
Length = 406
Score = 379 (138.5 bits), Expect = 7.4e-40, Sum P(2) = 7.4e-40
Identities = 76/158 (48%), Positives = 102/158 (64%)
Query: 15 FIRVVGSEFVQKYLGEGPRMVRDVFRLAKENSPXXXXXXXXXXXXTKRFDAQTGADREVQ 74
FIRV GSE VQK++GEG RMVR++F +A+E++P + R + +G D EVQ
Sbjct: 211 FIRVSGSELVQKFIGEGARMVRELFVMAREHAPSIIFMDEIDSIGSSRLEGGSGGDSEVQ 270
Query: 75 RILLELLNQMDGFDQTTNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLVFS 134
R +LELLNQ+DGF+ T N+KVIMATNR D LD ALLRPGR+DRKIEFP P+ + +
Sbjct: 271 RTMLELLNQLDGFEATKNIKVIMATNRIDILDSALLRPGRIDRKIEFPPPNEEARLDILK 330
Query: 135 TITAKMNLSDEVDLEDYVARPDRISGADINAICQEVIM 172
+ KMNL+ ++L SGA++ +C E M
Sbjct: 331 IHSRKMNLTRGINLRKIAELMPGASGAEVKGVCTEAGM 368
Score = 233 (87.1 bits), Expect = 1.4e-17, P = 1.4e-17
Identities = 48/102 (47%), Positives = 64/102 (62%)
Query: 223 NLQVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLVFSTITAKMNLSDEVDLEDY 282
N++VIMATNR D LD ALLRPGR+DRKIEFP P+ + + + KMNL+ ++L
Sbjct: 288 NIKVIMATNRIDILDSALLRPGRIDRKIEFPPPNEEARLDILKIHSRKMNLTRGINLRKI 347
Query: 283 VARPDRISGADINAICQEAGMHAVRENRYIVLPKDFEKGYKK 324
SGA++ +C EAGM+A+RE R V +DFE K
Sbjct: 348 AELMPGASGAEVKGVCTEAGMYALRERRVHVTQEDFEMAVAK 389
Score = 142 (55.0 bits), Expect = 3.3e-09, Sum P(2) = 3.3e-09
Identities = 32/59 (54%), Positives = 39/59 (66%)
Query: 169 EVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLVFSTITAKMNFMLNIGNLQVI 227
+VIMATNR D LD ALLRPGR+DRKIEFP P+ + + + KMN I NL+ I
Sbjct: 290 KVIMATNRIDILDSALLRPGRIDRKIEFPPPNEEARLDILKIHSRKMNLTRGI-NLRKI 347
Score = 62 (26.9 bits), Expect = 7.4e-40, Sum P(2) = 7.4e-40
Identities = 15/39 (38%), Positives = 21/39 (53%)
Query: 320 KGYKKCAGMHAVRENRYIVLPKDFEKGYKNNTKKDESEH 358
KG AGM+A+RE R V +DFE +KD ++
Sbjct: 360 KGVCTEAGMYALRERRVHVTQEDFEMAVAKVMQKDSEKN 398
>UNIPROTKB|P62197 [details] [associations]
symbol:PSMC5 "26S protease regulatory subunit 8"
species:9823 "Sus scrofa" [GO:0022624 "proteasome accessory
complex" evidence=ISS] [GO:0008134 "transcription factor binding"
evidence=ISS] [GO:0000502 "proteasome complex" evidence=ISS]
[GO:0043161 "proteasomal ubiquitin-dependent protein catabolic
process" evidence=ISS] [GO:0031531 "thyrotropin-releasing hormone
receptor binding" evidence=ISS] [GO:0005737 "cytoplasm"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISS] [GO:0045892
"negative regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0031410 "cytoplasmic vesicle" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737
GO:GO:0045892 GO:GO:0043161 GO:GO:0031410 GO:GO:0017111
GO:GO:0008134 eggNOG:COG1222 TIGRFAMs:TIGR01242 HOVERGEN:HBG000109
GO:GO:0022624 HOGENOM:HOG000225143 KO:K03066 OMA:QNIKVIM
GeneTree:ENSGT00550000074947 OrthoDB:EOG4MKNGF GO:GO:0031531
EMBL:X89718 EMBL:X89719 RefSeq:NP_999148.1 UniGene:Ssc.5451
ProteinModelPortal:P62197 SMR:P62197 STRING:P62197 PRIDE:P62197
Ensembl:ENSSSCT00000018819 GeneID:397043 KEGG:ssc:397043 CTD:397043
Uniprot:P62197
Length = 406
Score = 379 (138.5 bits), Expect = 7.4e-40, Sum P(2) = 7.4e-40
Identities = 76/158 (48%), Positives = 102/158 (64%)
Query: 15 FIRVVGSEFVQKYLGEGPRMVRDVFRLAKENSPXXXXXXXXXXXXTKRFDAQTGADREVQ 74
FIRV GSE VQK++GEG RMVR++F +A+E++P + R + +G D EVQ
Sbjct: 211 FIRVSGSELVQKFIGEGARMVRELFVMAREHAPSIIFMDEIDSIGSSRLEGGSGGDSEVQ 270
Query: 75 RILLELLNQMDGFDQTTNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLVFS 134
R +LELLNQ+DGF+ T N+KVIMATNR D LD ALLRPGR+DRKIEFP P+ + +
Sbjct: 271 RTMLELLNQLDGFEATKNIKVIMATNRIDILDSALLRPGRIDRKIEFPPPNEEARLDILK 330
Query: 135 TITAKMNLSDEVDLEDYVARPDRISGADINAICQEVIM 172
+ KMNL+ ++L SGA++ +C E M
Sbjct: 331 IHSRKMNLTRGINLRKIAELMPGASGAEVKGVCTEAGM 368
Score = 233 (87.1 bits), Expect = 1.4e-17, P = 1.4e-17
Identities = 48/102 (47%), Positives = 64/102 (62%)
Query: 223 NLQVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLVFSTITAKMNLSDEVDLEDY 282
N++VIMATNR D LD ALLRPGR+DRKIEFP P+ + + + KMNL+ ++L
Sbjct: 288 NIKVIMATNRIDILDSALLRPGRIDRKIEFPPPNEEARLDILKIHSRKMNLTRGINLRKI 347
Query: 283 VARPDRISGADINAICQEAGMHAVRENRYIVLPKDFEKGYKK 324
SGA++ +C EAGM+A+RE R V +DFE K
Sbjct: 348 AELMPGASGAEVKGVCTEAGMYALRERRVHVTQEDFEMAVAK 389
Score = 142 (55.0 bits), Expect = 3.3e-09, Sum P(2) = 3.3e-09
Identities = 32/59 (54%), Positives = 39/59 (66%)
Query: 169 EVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLVFSTITAKMNFMLNIGNLQVI 227
+VIMATNR D LD ALLRPGR+DRKIEFP P+ + + + KMN I NL+ I
Sbjct: 290 KVIMATNRIDILDSALLRPGRIDRKIEFPPPNEEARLDILKIHSRKMNLTRGI-NLRKI 347
Score = 62 (26.9 bits), Expect = 7.4e-40, Sum P(2) = 7.4e-40
Identities = 15/39 (38%), Positives = 21/39 (53%)
Query: 320 KGYKKCAGMHAVRENRYIVLPKDFEKGYKNNTKKDESEH 358
KG AGM+A+RE R V +DFE +KD ++
Sbjct: 360 KGVCTEAGMYALRERRVHVTQEDFEMAVAKVMQKDSEKN 398
>UNIPROTKB|Q4RG45 [details] [associations]
symbol:GSTENG00035021001 "Chromosome 2 SCAF15106, whole
genome shotgun sequence." species:99883 "Tetraodon nigroviridis"
[GO:0000502 "proteasome complex" evidence=ISS] [GO:0005634
"nucleus" evidence=ISS] [GO:0005737 "cytoplasm" evidence=ISS]
[GO:0008134 "transcription factor binding" evidence=ISS]
[GO:0031531 "thyrotropin-releasing hormone receptor binding"
evidence=ISS] [GO:0043161 "proteasomal ubiquitin-dependent protein
catabolic process" evidence=ISS] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GO:GO:0005634 GO:GO:0005737 GO:GO:0043161 GO:GO:0000502
GO:GO:0017111 GO:GO:0008134 eggNOG:COG1222 TIGRFAMs:TIGR01242
HOVERGEN:HBG000109 GO:GO:0031531 EMBL:CAAE01015106
ProteinModelPortal:Q4RG45 STRING:Q4RG45 Uniprot:Q4RG45
Length = 406
Score = 379 (138.5 bits), Expect = 7.4e-40, Sum P(2) = 7.4e-40
Identities = 76/158 (48%), Positives = 102/158 (64%)
Query: 15 FIRVVGSEFVQKYLGEGPRMVRDVFRLAKENSPXXXXXXXXXXXXTKRFDAQTGADREVQ 74
FIRV GSE VQK++GEG RMVR++F +A+E++P + R + +G D EVQ
Sbjct: 211 FIRVSGSELVQKFIGEGARMVRELFVMAREHAPSIIFMDEIDSIGSSRLEGGSGGDSEVQ 270
Query: 75 RILLELLNQMDGFDQTTNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLVFS 134
R +LELLNQ+DGF+ T N+KVIMATNR D LD ALLRPGR+DRKIEFP P+ + +
Sbjct: 271 RTMLELLNQLDGFEATKNIKVIMATNRIDILDSALLRPGRIDRKIEFPPPNEEARLDILK 330
Query: 135 TITAKMNLSDEVDLEDYVARPDRISGADINAICQEVIM 172
+ KMNL+ ++L SGA++ +C E M
Sbjct: 331 IHSRKMNLTRGINLRKIAELMPGASGAEVKGVCTEAGM 368
Score = 233 (87.1 bits), Expect = 1.4e-17, P = 1.4e-17
Identities = 48/102 (47%), Positives = 64/102 (62%)
Query: 223 NLQVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLVFSTITAKMNLSDEVDLEDY 282
N++VIMATNR D LD ALLRPGR+DRKIEFP P+ + + + KMNL+ ++L
Sbjct: 288 NIKVIMATNRIDILDSALLRPGRIDRKIEFPPPNEEARLDILKIHSRKMNLTRGINLRKI 347
Query: 283 VARPDRISGADINAICQEAGMHAVRENRYIVLPKDFEKGYKK 324
SGA++ +C EAGM+A+RE R V +DFE K
Sbjct: 348 AELMPGASGAEVKGVCTEAGMYALRERRVHVTQEDFEMAVAK 389
Score = 142 (55.0 bits), Expect = 3.3e-09, Sum P(2) = 3.3e-09
Identities = 32/59 (54%), Positives = 39/59 (66%)
Query: 169 EVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLVFSTITAKMNFMLNIGNLQVI 227
+VIMATNR D LD ALLRPGR+DRKIEFP P+ + + + KMN I NL+ I
Sbjct: 290 KVIMATNRIDILDSALLRPGRIDRKIEFPPPNEEARLDILKIHSRKMNLTRGI-NLRKI 347
Score = 62 (26.9 bits), Expect = 7.4e-40, Sum P(2) = 7.4e-40
Identities = 15/39 (38%), Positives = 21/39 (53%)
Query: 320 KGYKKCAGMHAVRENRYIVLPKDFEKGYKNNTKKDESEH 358
KG AGM+A+RE R V +DFE +KD ++
Sbjct: 360 KGVCTEAGMYALRERRVHVTQEDFEMAVAKVMQKDSEKN 398
>UNIPROTKB|Q6AZU7 [details] [associations]
symbol:Q6AZU7 "Putative uncharacterized protein"
species:8355 "Xenopus laevis" [GO:0000502 "proteasome complex"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISS] [GO:0005737
"cytoplasm" evidence=ISS] [GO:0008134 "transcription factor
binding" evidence=ISS] [GO:0031531 "thyrotropin-releasing hormone
receptor binding" evidence=ISS] [GO:0043161 "proteasomal
ubiquitin-dependent protein catabolic process" evidence=ISS]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0043161
GO:GO:0000502 GO:GO:0017111 GO:GO:0008134 TIGRFAMs:TIGR01242
HOVERGEN:HBG000109 GO:GO:0031531 EMBL:BC077223
ProteinModelPortal:Q6AZU7 Uniprot:Q6AZU7
Length = 414
Score = 379 (138.5 bits), Expect = 7.4e-40, Sum P(2) = 7.4e-40
Identities = 76/158 (48%), Positives = 102/158 (64%)
Query: 15 FIRVVGSEFVQKYLGEGPRMVRDVFRLAKENSPXXXXXXXXXXXXTKRFDAQTGADREVQ 74
FIRV GSE VQK++GEG RMVR++F +A+E++P + R + +G D EVQ
Sbjct: 219 FIRVSGSELVQKFIGEGARMVRELFVMAREHAPSIIFMDEIDSIGSSRLEGGSGGDSEVQ 278
Query: 75 RILLELLNQMDGFDQTTNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLVFS 134
R +LELLNQ+DGF+ T N+KVIMATNR D LD ALLRPGR+DRKIEFP P+ + +
Sbjct: 279 RTMLELLNQLDGFEATKNIKVIMATNRIDILDSALLRPGRIDRKIEFPPPNEEARLDILK 338
Query: 135 TITAKMNLSDEVDLEDYVARPDRISGADINAICQEVIM 172
+ KMNL+ ++L SGA++ +C E M
Sbjct: 339 IHSRKMNLTRGINLRKIAELMPGASGAEVKGVCTEAGM 376
Score = 233 (87.1 bits), Expect = 1.5e-17, P = 1.5e-17
Identities = 48/102 (47%), Positives = 64/102 (62%)
Query: 223 NLQVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLVFSTITAKMNLSDEVDLEDY 282
N++VIMATNR D LD ALLRPGR+DRKIEFP P+ + + + KMNL+ ++L
Sbjct: 296 NIKVIMATNRIDILDSALLRPGRIDRKIEFPPPNEEARLDILKIHSRKMNLTRGINLRKI 355
Query: 283 VARPDRISGADINAICQEAGMHAVRENRYIVLPKDFEKGYKK 324
SGA++ +C EAGM+A+RE R V +DFE K
Sbjct: 356 AELMPGASGAEVKGVCTEAGMYALRERRVHVTQEDFEMAVAK 397
Score = 142 (55.0 bits), Expect = 3.5e-09, Sum P(2) = 3.5e-09
Identities = 32/59 (54%), Positives = 39/59 (66%)
Query: 169 EVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLVFSTITAKMNFMLNIGNLQVI 227
+VIMATNR D LD ALLRPGR+DRKIEFP P+ + + + KMN I NL+ I
Sbjct: 298 KVIMATNRIDILDSALLRPGRIDRKIEFPPPNEEARLDILKIHSRKMNLTRGI-NLRKI 355
Score = 62 (26.9 bits), Expect = 7.4e-40, Sum P(2) = 7.4e-40
Identities = 15/39 (38%), Positives = 21/39 (53%)
Query: 320 KGYKKCAGMHAVRENRYIVLPKDFEKGYKNNTKKDESEH 358
KG AGM+A+RE R V +DFE +KD ++
Sbjct: 368 KGVCTEAGMYALRERRVHVTQEDFEMAVAKVMQKDSEKN 406
>UNIPROTKB|Q6P380 [details] [associations]
symbol:psmc5 "Putative uncharacterized protein MGC75584"
species:8364 "Xenopus (Silurana) tropicalis" [GO:0000502
"proteasome complex" evidence=ISS] [GO:0005634 "nucleus"
evidence=ISS] [GO:0005737 "cytoplasm" evidence=ISS] [GO:0008134
"transcription factor binding" evidence=ISS] [GO:0031531
"thyrotropin-releasing hormone receptor binding" evidence=ISS]
[GO:0043161 "proteasomal ubiquitin-dependent protein catabolic
process" evidence=ISS] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737
GO:GO:0043161 GO:GO:0000502 GO:GO:0017111 GO:GO:0008134
eggNOG:COG1222 TIGRFAMs:TIGR01242 HOVERGEN:HBG000109
HOGENOM:HOG000225143 KO:K03066 CTD:5705 OrthoDB:EOG4MKNGF
GO:GO:0031531 EMBL:BC064153 RefSeq:NP_989358.1 UniGene:Str.3783
ProteinModelPortal:Q6P380 STRING:Q6P380 GeneID:394988
KEGG:xtr:394988 Xenbase:XB-GENE-999928 InParanoid:Q6P380
Uniprot:Q6P380
Length = 414
Score = 379 (138.5 bits), Expect = 7.4e-40, Sum P(2) = 7.4e-40
Identities = 76/158 (48%), Positives = 102/158 (64%)
Query: 15 FIRVVGSEFVQKYLGEGPRMVRDVFRLAKENSPXXXXXXXXXXXXTKRFDAQTGADREVQ 74
FIRV GSE VQK++GEG RMVR++F +A+E++P + R + +G D EVQ
Sbjct: 219 FIRVSGSELVQKFIGEGARMVRELFVMAREHAPSIIFMDEIDSIGSSRLEGGSGGDSEVQ 278
Query: 75 RILLELLNQMDGFDQTTNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLVFS 134
R +LELLNQ+DGF+ T N+KVIMATNR D LD ALLRPGR+DRKIEFP P+ + +
Sbjct: 279 RTMLELLNQLDGFEATKNIKVIMATNRIDILDSALLRPGRIDRKIEFPPPNEEARLDILK 338
Query: 135 TITAKMNLSDEVDLEDYVARPDRISGADINAICQEVIM 172
+ KMNL+ ++L SGA++ +C E M
Sbjct: 339 IHSRKMNLTRGINLRKIAELMPGASGAEVKGVCTEAGM 376
Score = 233 (87.1 bits), Expect = 1.5e-17, P = 1.5e-17
Identities = 48/102 (47%), Positives = 64/102 (62%)
Query: 223 NLQVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLVFSTITAKMNLSDEVDLEDY 282
N++VIMATNR D LD ALLRPGR+DRKIEFP P+ + + + KMNL+ ++L
Sbjct: 296 NIKVIMATNRIDILDSALLRPGRIDRKIEFPPPNEEARLDILKIHSRKMNLTRGINLRKI 355
Query: 283 VARPDRISGADINAICQEAGMHAVRENRYIVLPKDFEKGYKK 324
SGA++ +C EAGM+A+RE R V +DFE K
Sbjct: 356 AELMPGASGAEVKGVCTEAGMYALRERRVHVTQEDFEMAVAK 397
Score = 142 (55.0 bits), Expect = 3.5e-09, Sum P(2) = 3.5e-09
Identities = 32/59 (54%), Positives = 39/59 (66%)
Query: 169 EVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLVFSTITAKMNFMLNIGNLQVI 227
+VIMATNR D LD ALLRPGR+DRKIEFP P+ + + + KMN I NL+ I
Sbjct: 298 KVIMATNRIDILDSALLRPGRIDRKIEFPPPNEEARLDILKIHSRKMNLTRGI-NLRKI 355
Score = 62 (26.9 bits), Expect = 7.4e-40, Sum P(2) = 7.4e-40
Identities = 15/39 (38%), Positives = 21/39 (53%)
Query: 320 KGYKKCAGMHAVRENRYIVLPKDFEKGYKNNTKKDESEH 358
KG AGM+A+RE R V +DFE +KD ++
Sbjct: 368 KGVCTEAGMYALRERRVHVTQEDFEMAVAKVMQKDSEKN 406
>MGI|MGI:105047 [details] [associations]
symbol:Psmc5 "protease (prosome, macropain) 26S subunit,
ATPase 5" species:10090 "Mus musculus" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0000502 "proteasome complex"
evidence=ISO] [GO:0005102 "receptor binding" evidence=IPI]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=ISO]
[GO:0005675 "holo TFIIH complex" evidence=ISA] [GO:0005737
"cytoplasm" evidence=ISO] [GO:0006200 "ATP catabolic process"
evidence=ISO] [GO:0006508 "proteolysis" evidence=IEA] [GO:0008134
"transcription factor binding" evidence=ISO;ISA] [GO:0008233
"peptidase activity" evidence=IEA] [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0016887 "ATPase activity" evidence=ISO]
[GO:0017025 "TBP-class protein binding" evidence=ISO] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0022624
"proteasome accessory complex" evidence=IDA] [GO:0030163 "protein
catabolic process" evidence=IEA] [GO:0031410 "cytoplasmic vesicle"
evidence=ISO] [GO:0031531 "thyrotropin-releasing hormone receptor
binding" evidence=ISO] [GO:0031595 "nuclear proteasome complex"
evidence=ISO] [GO:0043161 "proteasomal ubiquitin-dependent protein
catabolic process" evidence=ISO] [GO:0045892 "negative regulation
of transcription, DNA-dependent" evidence=IDA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 MGI:MGI:105047
GO:GO:0005524 GO:GO:0005737 GO:GO:0045892 GO:GO:0043161
GO:GO:0031410 GO:GO:0017111 GO:GO:0008134 GO:GO:0005675
eggNOG:COG1222 TIGRFAMs:TIGR01242 HOVERGEN:HBG000109 GO:GO:0022624
KO:K03066 OMA:QNIKVIM CTD:5705 GeneTree:ENSGT00550000074947
OrthoDB:EOG4MKNGF GO:GO:0031531 EMBL:Z54219 EMBL:AK010505
EMBL:AK135451 EMBL:AK145703 IPI:IPI00135640 PIR:S61923
RefSeq:NP_032976.1 UniGene:Mm.272361 ProteinModelPortal:P62196
SMR:P62196 IntAct:P62196 STRING:P62196 PhosphoSite:P62196
REPRODUCTION-2DPAGE:IPI00135640 REPRODUCTION-2DPAGE:P62196
PaxDb:P62196 PRIDE:P62196 Ensembl:ENSMUST00000021049 GeneID:19184
KEGG:mmu:19184 InParanoid:P62196 NextBio:295882 Bgee:P62196
Genevestigator:P62196 GermOnline:ENSMUSG00000020708 Uniprot:P62196
Length = 406
Score = 379 (138.5 bits), Expect = 7.4e-40, Sum P(2) = 7.4e-40
Identities = 76/158 (48%), Positives = 102/158 (64%)
Query: 15 FIRVVGSEFVQKYLGEGPRMVRDVFRLAKENSPXXXXXXXXXXXXTKRFDAQTGADREVQ 74
FIRV GSE VQK++GEG RMVR++F +A+E++P + R + +G D EVQ
Sbjct: 211 FIRVSGSELVQKFIGEGARMVRELFVMAREHAPSIIFMDEIDSIGSSRLEGGSGGDSEVQ 270
Query: 75 RILLELLNQMDGFDQTTNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLVFS 134
R +LELLNQ+DGF+ T N+KVIMATNR D LD ALLRPGR+DRKIEFP P+ + +
Sbjct: 271 RTMLELLNQLDGFEATKNIKVIMATNRIDILDSALLRPGRIDRKIEFPPPNEEARLDILK 330
Query: 135 TITAKMNLSDEVDLEDYVARPDRISGADINAICQEVIM 172
+ KMNL+ ++L SGA++ +C E M
Sbjct: 331 IHSRKMNLTRGINLRKIAELMPGASGAEVKGVCTEAGM 368
Score = 233 (87.1 bits), Expect = 1.4e-17, P = 1.4e-17
Identities = 48/102 (47%), Positives = 64/102 (62%)
Query: 223 NLQVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLVFSTITAKMNLSDEVDLEDY 282
N++VIMATNR D LD ALLRPGR+DRKIEFP P+ + + + KMNL+ ++L
Sbjct: 288 NIKVIMATNRIDILDSALLRPGRIDRKIEFPPPNEEARLDILKIHSRKMNLTRGINLRKI 347
Query: 283 VARPDRISGADINAICQEAGMHAVRENRYIVLPKDFEKGYKK 324
SGA++ +C EAGM+A+RE R V +DFE K
Sbjct: 348 AELMPGASGAEVKGVCTEAGMYALRERRVHVTQEDFEMAVAK 389
Score = 142 (55.0 bits), Expect = 3.3e-09, Sum P(2) = 3.3e-09
Identities = 32/59 (54%), Positives = 39/59 (66%)
Query: 169 EVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLVFSTITAKMNFMLNIGNLQVI 227
+VIMATNR D LD ALLRPGR+DRKIEFP P+ + + + KMN I NL+ I
Sbjct: 290 KVIMATNRIDILDSALLRPGRIDRKIEFPPPNEEARLDILKIHSRKMNLTRGI-NLRKI 347
Score = 62 (26.9 bits), Expect = 7.4e-40, Sum P(2) = 7.4e-40
Identities = 15/39 (38%), Positives = 21/39 (53%)
Query: 320 KGYKKCAGMHAVRENRYIVLPKDFEKGYKNNTKKDESEH 358
KG AGM+A+RE R V +DFE +KD ++
Sbjct: 360 KGVCTEAGMYALRERRVHVTQEDFEMAVAKVMQKDSEKN 398
>RGD|708376 [details] [associations]
symbol:Psmc5 "proteasome (prosome, macropain) 26S subunit,
ATPase, 5" species:10116 "Rattus norvegicus" [GO:0000502
"proteasome complex" evidence=ISO;ISS] [GO:0005102 "receptor
binding" evidence=ISO] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISO;ISS;IDA] [GO:0005737 "cytoplasm"
evidence=ISO;ISS] [GO:0006200 "ATP catabolic process" evidence=IDA]
[GO:0008134 "transcription factor binding" evidence=ISO;ISS]
[GO:0016887 "ATPase activity" evidence=IDA] [GO:0017025 "TBP-class
protein binding" evidence=IPI] [GO:0022624 "proteasome accessory
complex" evidence=ISO;ISS] [GO:0031410 "cytoplasmic vesicle"
evidence=IEA;ISO] [GO:0031531 "thyrotropin-releasing hormone
receptor binding" evidence=ISO;ISS] [GO:0031595 "nuclear proteasome
complex" evidence=IDA] [GO:0043161 "proteasomal ubiquitin-dependent
protein catabolic process" evidence=ISO;ISS] [GO:0045892 "negative
regulation of transcription, DNA-dependent" evidence=IEA;ISO]
[GO:0005730 "nucleolus" evidence=ISO] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 RGD:708376 GO:GO:0005524
GO:GO:0005737 GO:GO:0045892 GO:GO:0043161 GO:GO:0031410
GO:GO:0016887 GO:GO:0008134 eggNOG:COG1222 TIGRFAMs:TIGR01242
HOVERGEN:HBG000109 GO:GO:0022624 HOGENOM:HOG000225143 KO:K03066
OMA:QNIKVIM CTD:5705 GeneTree:ENSGT00550000074947 OrthoDB:EOG4MKNGF
GO:GO:0031531 EMBL:D83521 EMBL:AB000491 EMBL:AB000493 EMBL:BC058462
IPI:IPI00213587 PIR:T43799 RefSeq:NP_112411.1 UniGene:Rn.10972
ProteinModelPortal:P62198 SMR:P62198 IntAct:P62198 STRING:P62198
PhosphoSite:P62198 World-2DPAGE:0004:P62198 PRIDE:P62198
Ensembl:ENSRNOT00000013997 GeneID:81827 KEGG:rno:81827
UCSC:RGD:708376 InParanoid:P62198 NextBio:615767
ArrayExpress:P62198 Genevestigator:P62198
GermOnline:ENSRNOG00000010038 GO:GO:0031595 Uniprot:P62198
Length = 406
Score = 379 (138.5 bits), Expect = 7.4e-40, Sum P(2) = 7.4e-40
Identities = 76/158 (48%), Positives = 102/158 (64%)
Query: 15 FIRVVGSEFVQKYLGEGPRMVRDVFRLAKENSPXXXXXXXXXXXXTKRFDAQTGADREVQ 74
FIRV GSE VQK++GEG RMVR++F +A+E++P + R + +G D EVQ
Sbjct: 211 FIRVSGSELVQKFIGEGARMVRELFVMAREHAPSIIFMDEIDSIGSSRLEGGSGGDSEVQ 270
Query: 75 RILLELLNQMDGFDQTTNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLVFS 134
R +LELLNQ+DGF+ T N+KVIMATNR D LD ALLRPGR+DRKIEFP P+ + +
Sbjct: 271 RTMLELLNQLDGFEATKNIKVIMATNRIDILDSALLRPGRIDRKIEFPPPNEEARLDILK 330
Query: 135 TITAKMNLSDEVDLEDYVARPDRISGADINAICQEVIM 172
+ KMNL+ ++L SGA++ +C E M
Sbjct: 331 IHSRKMNLTRGINLRKIAELMPGASGAEVKGVCTEAGM 368
Score = 233 (87.1 bits), Expect = 1.4e-17, P = 1.4e-17
Identities = 48/102 (47%), Positives = 64/102 (62%)
Query: 223 NLQVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLVFSTITAKMNLSDEVDLEDY 282
N++VIMATNR D LD ALLRPGR+DRKIEFP P+ + + + KMNL+ ++L
Sbjct: 288 NIKVIMATNRIDILDSALLRPGRIDRKIEFPPPNEEARLDILKIHSRKMNLTRGINLRKI 347
Query: 283 VARPDRISGADINAICQEAGMHAVRENRYIVLPKDFEKGYKK 324
SGA++ +C EAGM+A+RE R V +DFE K
Sbjct: 348 AELMPGASGAEVKGVCTEAGMYALRERRVHVTQEDFEMAVAK 389
Score = 142 (55.0 bits), Expect = 3.3e-09, Sum P(2) = 3.3e-09
Identities = 32/59 (54%), Positives = 39/59 (66%)
Query: 169 EVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLVFSTITAKMNFMLNIGNLQVI 227
+VIMATNR D LD ALLRPGR+DRKIEFP P+ + + + KMN I NL+ I
Sbjct: 290 KVIMATNRIDILDSALLRPGRIDRKIEFPPPNEEARLDILKIHSRKMNLTRGI-NLRKI 347
Score = 62 (26.9 bits), Expect = 7.4e-40, Sum P(2) = 7.4e-40
Identities = 15/39 (38%), Positives = 21/39 (53%)
Query: 320 KGYKKCAGMHAVRENRYIVLPKDFEKGYKNNTKKDESEH 358
KG AGM+A+RE R V +DFE +KD ++
Sbjct: 360 KGVCTEAGMYALRERRVHVTQEDFEMAVAKVMQKDSEKN 398
>ZFIN|ZDB-GENE-030131-6547 [details] [associations]
symbol:psmc5 "proteasome (prosome, macropain) 26S
subunit, ATPase, 5" species:7955 "Danio rerio" [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA;ISS] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0005634 "nucleus" evidence=ISS] [GO:0031531
"thyrotropin-releasing hormone receptor binding" evidence=ISS]
[GO:0000502 "proteasome complex" evidence=IEA;ISS] [GO:0008134
"transcription factor binding" evidence=ISS] [GO:0043161
"proteasomal ubiquitin-dependent protein catabolic process"
evidence=ISS] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 ZFIN:ZDB-GENE-030131-6547 GO:GO:0005524 GO:GO:0005634
GO:GO:0005737 GO:GO:0043161 GO:GO:0000502 GO:GO:0017111
GO:GO:0008134 eggNOG:COG1222 TIGRFAMs:TIGR01242 HOVERGEN:HBG000109
HOGENOM:HOG000225143 KO:K03066 OMA:QNIKVIM CTD:5705
GeneTree:ENSGT00550000074947 OrthoDB:EOG4MKNGF GO:GO:0031531
EMBL:CU459020 EMBL:BC078375 IPI:IPI00482097 RefSeq:NP_001003740.1
UniGene:Dr.75934 STRING:Q6AZC1 Ensembl:ENSDART00000106191
GeneID:445285 KEGG:dre:445285 InParanoid:Q6AZC1 NextBio:20832032
Uniprot:Q6AZC1
Length = 406
Score = 379 (138.5 bits), Expect = 7.4e-40, Sum P(2) = 7.4e-40
Identities = 76/158 (48%), Positives = 102/158 (64%)
Query: 15 FIRVVGSEFVQKYLGEGPRMVRDVFRLAKENSPXXXXXXXXXXXXTKRFDAQTGADREVQ 74
FIRV GSE VQK++GEG RMVR++F +A+E++P + R + +G D EVQ
Sbjct: 211 FIRVSGSELVQKFIGEGARMVRELFVMAREHAPSIIFMDEIDSIGSSRLEGGSGGDSEVQ 270
Query: 75 RILLELLNQMDGFDQTTNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLVFS 134
R +LELLNQ+DGF+ T N+KVIMATNR D LD ALLRPGR+DRKIEFP P+ + +
Sbjct: 271 RTMLELLNQLDGFEATKNIKVIMATNRIDILDSALLRPGRIDRKIEFPPPNEEARLDILK 330
Query: 135 TITAKMNLSDEVDLEDYVARPDRISGADINAICQEVIM 172
+ KMNL+ ++L SGA++ +C E M
Sbjct: 331 IHSRKMNLTRGINLRKIAELMPGASGAEVKGVCTEAGM 368
Score = 233 (87.1 bits), Expect = 1.4e-17, P = 1.4e-17
Identities = 48/102 (47%), Positives = 64/102 (62%)
Query: 223 NLQVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLVFSTITAKMNLSDEVDLEDY 282
N++VIMATNR D LD ALLRPGR+DRKIEFP P+ + + + KMNL+ ++L
Sbjct: 288 NIKVIMATNRIDILDSALLRPGRIDRKIEFPPPNEEARLDILKIHSRKMNLTRGINLRKI 347
Query: 283 VARPDRISGADINAICQEAGMHAVRENRYIVLPKDFEKGYKK 324
SGA++ +C EAGM+A+RE R V +DFE K
Sbjct: 348 AELMPGASGAEVKGVCTEAGMYALRERRVHVTQEDFEMAVAK 389
Score = 142 (55.0 bits), Expect = 3.3e-09, Sum P(2) = 3.3e-09
Identities = 32/59 (54%), Positives = 39/59 (66%)
Query: 169 EVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLVFSTITAKMNFMLNIGNLQVI 227
+VIMATNR D LD ALLRPGR+DRKIEFP P+ + + + KMN I NL+ I
Sbjct: 290 KVIMATNRIDILDSALLRPGRIDRKIEFPPPNEEARLDILKIHSRKMNLTRGI-NLRKI 347
Score = 62 (26.9 bits), Expect = 7.4e-40, Sum P(2) = 7.4e-40
Identities = 15/39 (38%), Positives = 21/39 (53%)
Query: 320 KGYKKCAGMHAVRENRYIVLPKDFEKGYKNNTKKDESEH 358
KG AGM+A+RE R V +DFE +KD ++
Sbjct: 360 KGVCTEAGMYALRERRVHVTQEDFEMAVAKVMQKDSEKN 398
>DICTYBASE|DDB_G0292382 [details] [associations]
symbol:psmC5 "HIV TAT binding-protein-related"
species:44689 "Dictyostelium discoideum" [GO:0030163 "protein
catabolic process" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0006508 "proteolysis"
evidence=ISS] [GO:0005838 "proteasome regulatory particle"
evidence=ISS] [GO:0004175 "endopeptidase activity" evidence=ISS]
[GO:0005634 "nucleus" evidence=IEA] [GO:0000502 "proteasome
complex" evidence=IEA] [GO:0044351 "macropinocytosis" evidence=RCA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
dictyBase:DDB_G0292382 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737
GenomeReviews:CM000155_GR GO:GO:0006508 GO:GO:0004175 GO:GO:0030163
GO:GO:0017111 EMBL:AAFI02000190 eggNOG:COG1222 TIGRFAMs:TIGR01242
GO:GO:0005838 KO:K03066 EMBL:L16579 PIR:JN0610 RefSeq:XP_629632.1
ProteinModelPortal:P34124 STRING:P34124 EnsemblProtists:DDB0216230
GeneID:8628696 KEGG:ddi:DDB_G0292382 OMA:RAALKHE
ProtClustDB:CLSZ2429412 Uniprot:P34124
Length = 403
Score = 376 (137.4 bits), Expect = 7.4e-40, Sum P(2) = 7.4e-40
Identities = 77/159 (48%), Positives = 106/159 (66%)
Query: 15 FIRVVGSEFVQKYLGEGPRMVRDVFRLAKENSPXXXXXXXXXXXXTKRFDAQTGA-DREV 73
FIRV GSE VQKY+GEG RMVR++F +A+E++P + R ++ +G D EV
Sbjct: 207 FIRVSGSELVQKYIGEGSRMVRELFIMAREHAPSIIFMDEIDSIGSSRGESGSGGGDSEV 266
Query: 74 QRILLELLNQMDGFDQTTNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLVF 133
QR +LELLNQ+DGF+ T N+KV+M TNR D LDPALLRPGR+DRKIEFP P + +
Sbjct: 267 QRTMLELLNQLDGFESTKNIKVLMCTNRIDILDPALLRPGRIDRKIEFPNPGDAGRLDIL 326
Query: 134 STITAKMNLSDEVDLEDYVARPDRISGADINAICQEVIM 172
+ KMNL+ ++L+ + + SGA++ A+C E M
Sbjct: 327 KIHSRKMNLTRGINLKKISDKMNGASGAELKAVCTEAGM 365
Score = 236 (88.1 bits), Expect = 5.4e-18, P = 5.4e-18
Identities = 48/102 (47%), Positives = 67/102 (65%)
Query: 223 NLQVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLVFSTITAKMNLSDEVDLEDY 282
N++V+M TNR D LDPALLRPGR+DRKIEFP P + + + KMNL+ ++L+
Sbjct: 285 NIKVLMCTNRIDILDPALLRPGRIDRKIEFPNPGDAGRLDILKIHSRKMNLTRGINLKKI 344
Query: 283 VARPDRISGADINAICQEAGMHAVRENRYIVLPKDFEKGYKK 324
+ + SGA++ A+C EAGM+A+RE R V +DFE K
Sbjct: 345 SDKMNGASGAELKAVCTEAGMYALRERRVHVSQEDFEMAVSK 386
Score = 138 (53.6 bits), Expect = 4.5e-09, Sum P(2) = 4.5e-09
Identities = 31/59 (52%), Positives = 38/59 (64%)
Query: 169 EVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLVFSTITAKMNFMLNIGNLQVI 227
+V+M TNR D LDPALLRPGR+DRKIEFP P + + + KMN I NL+ I
Sbjct: 287 KVLMCTNRIDILDPALLRPGRIDRKIEFPNPGDAGRLDILKIHSRKMNLTRGI-NLKKI 344
Score = 65 (27.9 bits), Expect = 7.4e-40, Sum P(2) = 7.4e-40
Identities = 14/33 (42%), Positives = 19/33 (57%)
Query: 326 AGMHAVRENRYIVLPKDFEKGYKNNTKKDESEH 358
AGM+A+RE R V +DFE KKD ++
Sbjct: 363 AGMYALRERRVHVSQEDFEMAVSKVMKKDSEQN 395
>FB|FBgn0039788 [details] [associations]
symbol:Rpt6R "Regulatory particle triple-A ATPase 6-related"
species:7227 "Drosophila melanogaster" [GO:0016887 "ATPase
activity" evidence=ISS] [GO:0008540 "proteasome regulatory
particle, base subcomplex" evidence=ISS] [GO:0006508 "proteolysis"
evidence=ISS] [GO:0030163 "protein catabolic process" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0005875 "microtubule associated complex"
evidence=IDA] [GO:0022008 "neurogenesis" evidence=IMP]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
EMBL:AE014297 GO:GO:0005524 GO:GO:0005737 GO:GO:0005875
GO:GO:0022008 GO:GO:0006200 GO:GO:0016887 GO:GO:0030163 HSSP:Q01853
eggNOG:COG1222 TIGRFAMs:TIGR01242 KO:K03066
GeneTree:ENSGT00550000074947 EMBL:AY119229 RefSeq:NP_651811.1
UniGene:Dm.13760 SMR:Q9VA54 IntAct:Q9VA54 MINT:MINT-308887
STRING:Q9VA54 EnsemblMetazoa:FBtr0085680 GeneID:43635
KEGG:dme:Dmel_CG2241 UCSC:CG2241-RA CTD:43635 FlyBase:FBgn0039788
InParanoid:Q9VA54 OMA:NDAYSAG OrthoDB:EOG41JWTK GenomeRNAi:43635
NextBio:834976 Uniprot:Q9VA54
Length = 399
Score = 376 (137.4 bits), Expect = 1.5e-39, Sum P(2) = 1.5e-39
Identities = 77/158 (48%), Positives = 102/158 (64%)
Query: 15 FIRVVGSEFVQKYLGEGPRMVRDVFRLAKENSPXXXXXXXXXXXXTKRFDAQTGADREVQ 74
FIRV GSE VQK++GEG RMVR++F +A+E++P + R + TG D EVQ
Sbjct: 205 FIRVSGSELVQKFIGEGSRMVRELFVMAREHAPSIIFMDEIDSIGSARLETGTG-DSEVQ 263
Query: 75 RILLELLNQMDGFDQTTNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLVFS 134
R +LELLNQ+DGF+ T N+KVIMATNR D LD ALLRPGR+DRKIEFP P+ + +
Sbjct: 264 RTMLELLNQLDGFEATKNIKVIMATNRIDVLDQALLRPGRIDRKIEFPPPNEEARLDILK 323
Query: 135 TITAKMNLSDEVDLEDYVARPDRISGADINAICQEVIM 172
+ KMNL+ ++L SGA++ +C E M
Sbjct: 324 IHSRKMNLTRGINLRKIAEEMPGASGAEVKGVCTEAGM 361
Score = 237 (88.5 bits), Expect = 3.7e-18, P = 3.7e-18
Identities = 48/102 (47%), Positives = 64/102 (62%)
Query: 223 NLQVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLVFSTITAKMNLSDEVDLEDY 282
N++VIMATNR D LD ALLRPGR+DRKIEFP P+ + + + KMNL+ ++L
Sbjct: 281 NIKVIMATNRIDVLDQALLRPGRIDRKIEFPPPNEEARLDILKIHSRKMNLTRGINLRKI 340
Query: 283 VARPDRISGADINAICQEAGMHAVRENRYIVLPKDFEKGYKK 324
SGA++ +C EAGM+A+RE R V +DFE K
Sbjct: 341 AEEMPGASGAEVKGVCTEAGMYALRERRVHVTQEDFEMAVSK 382
Score = 143 (55.4 bits), Expect = 2.4e-09, Sum P(2) = 2.4e-09
Identities = 32/59 (54%), Positives = 39/59 (66%)
Query: 169 EVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLVFSTITAKMNFMLNIGNLQVI 227
+VIMATNR D LD ALLRPGR+DRKIEFP P+ + + + KMN I NL+ I
Sbjct: 283 KVIMATNRIDVLDQALLRPGRIDRKIEFPPPNEEARLDILKIHSRKMNLTRGI-NLRKI 340
Score = 62 (26.9 bits), Expect = 1.5e-39, Sum P(2) = 1.5e-39
Identities = 18/47 (38%), Positives = 27/47 (57%)
Query: 320 KGYKKCAGMHAVRENRYIVLPKDFE----KGYKNNTKKDESEHEFYK 362
KG AGM+A+RE R V +DFE K +++K+ S +F+K
Sbjct: 353 KGVCTEAGMYALRERRVHVTQEDFEMAVSKVMMKDSEKNMSIRKFWK 399
>ASPGD|ASPL0000064945 [details] [associations]
symbol:AN6988 species:162425 "Emericella nidulans"
[GO:0005524 "ATP binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005635
"nuclear envelope" evidence=IEA] [GO:0008540 "proteasome regulatory
particle, base subcomplex" evidence=IEA] [GO:0034515 "proteasome
storage granule" evidence=IEA] [GO:0019904 "protein domain specific
binding" evidence=IEA] [GO:0070682 "proteasome regulatory particle
assembly" evidence=IEA] [GO:0006338 "chromatin remodeling"
evidence=IEA] [GO:0032968 "positive regulation of transcription
elongation from RNA polymerase II promoter" evidence=IEA]
[GO:0043161 "proteasomal ubiquitin-dependent protein catabolic
process" evidence=IEA] [GO:0051091 "positive regulation of
sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0045899 "positive regulation of RNA polymerase II
transcriptional preinitiation complex assembly" evidence=IEA]
[GO:0043433 "negative regulation of sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0006289
"nucleotide-excision repair" evidence=IEA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GO:GO:0005737 EMBL:BN001304 GO:GO:0030163 GO:GO:0017111
EMBL:AACD01000117 eggNOG:COG1222 TIGRFAMs:TIGR01242
HOGENOM:HOG000225143 KO:K03066 OMA:QNIKVIM OrthoDB:EOG44N21J
RefSeq:XP_664592.1 ProteinModelPortal:Q5AXJ2 STRING:Q5AXJ2
EnsemblFungi:CADANIAT00000491 GeneID:2869968 KEGG:ani:AN6988.2
Uniprot:Q5AXJ2
Length = 389
Score = 382 (139.5 bits), Expect = 1.9e-39, Sum P(2) = 1.9e-39
Identities = 76/158 (48%), Positives = 102/158 (64%)
Query: 15 FIRVVGSEFVQKYLGEGPRMVRDVFRLAKENSPXXXXXXXXXXXXTKRFDAQTGADREVQ 74
FIRV GSE VQKY+GEG RMVR++F +A+E++P + R D+ D EVQ
Sbjct: 194 FIRVSGSELVQKYIGEGSRMVRELFVMAREHAPSIIFMDEIDSIGSSRIDSAGSGDSEVQ 253
Query: 75 RILLELLNQMDGFDQTTNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLVFS 134
R +LELLNQ+DGF+ T N+K+IMATNR D LDPALLRPGR+DRKIEFP P + +
Sbjct: 254 RTMLELLNQLDGFEPTKNIKIIMATNRLDILDPALLRPGRIDRKIEFPPPSVEARADILR 313
Query: 135 TITAKMNLSDEVDLEDYVARPDRISGADINAICQEVIM 172
+ MNL+ ++L + + SGA++ +C E M
Sbjct: 314 IHSRSMNLTRGINLTKIAEKMNGCSGAELKGVCTEAGM 351
Score = 237 (88.5 bits), Expect = 3.2e-18, P = 3.2e-18
Identities = 48/111 (43%), Positives = 68/111 (61%)
Query: 223 NLQVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLVFSTITAKMNLSDEVDLEDY 282
N+++IMATNR D LDPALLRPGR+DRKIEFP P + + + MNL+ ++L
Sbjct: 271 NIKIIMATNRLDILDPALLRPGRIDRKIEFPPPSVEARADILRIHSRSMNLTRGINLTKI 330
Query: 283 VARPDRISGADINAICQEAGMHAVRENRYIVLPKDFEKGYKKCAGMHAVRE 333
+ + SGA++ +C EAGM+A+RE R V +DF+ K H +E
Sbjct: 331 AEKMNGCSGAELKGVCTEAGMYALRERRVHVTQEDFDLATAKILNKHDDKE 381
Score = 138 (53.6 bits), Expect = 4.2e-08, Sum P(2) = 4.2e-08
Identities = 31/59 (52%), Positives = 37/59 (62%)
Query: 169 EVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLVFSTITAKMNFMLNIGNLQVI 227
++IMATNR D LDPALLRPGR+DRKIEFP P + + + MN I NL I
Sbjct: 273 KIIMATNRLDILDPALLRPGRIDRKIEFPPPSVEARADILRIHSRSMNLTRGI-NLTKI 330
Score = 55 (24.4 bits), Expect = 1.9e-39, Sum P(2) = 1.9e-39
Identities = 16/39 (41%), Positives = 21/39 (53%)
Query: 320 KGYKKCAGMHAVRENRYIVLPKDFEKGY-KNNTKKDESE 357
KG AGM+A+RE R V +DF+ K K D+ E
Sbjct: 343 KGVCTEAGMYALRERRVHVTQEDFDLATAKILNKHDDKE 381
>TAIR|locus:2147670 [details] [associations]
symbol:RPT6A "regulatory particle triple-A ATPase 6A"
species:3702 "Arabidopsis thaliana" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISM;TAS] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0016887 "ATPase activity" evidence=IGI;ISS] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=TAS]
[GO:0005886 "plasma membrane" evidence=IDA] [GO:0000502 "proteasome
complex" evidence=IDA] [GO:0005829 "cytosol" evidence=IDA]
[GO:0008540 "proteasome regulatory particle, base subcomplex"
evidence=IDA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005829 GO:GO:0005886 GO:GO:0005524
GO:GO:0005634 EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0030163
GO:GO:0000502 HSSP:Q01853 GO:GO:0017111 EMBL:AF296836
eggNOG:COG1222 TIGRFAMs:TIGR01242 HOGENOM:HOG000225143
EMBL:AF123395 EMBL:AB044348 EMBL:AY065174 EMBL:BT009668
IPI:IPI00542662 RefSeq:NP_568389.1 UniGene:At.10507
ProteinModelPortal:Q9C5U3 SMR:Q9C5U3 IntAct:Q9C5U3 STRING:Q9C5U3
PaxDb:Q9C5U3 PRIDE:Q9C5U3 EnsemblPlants:AT5G19990.1 GeneID:832121
KEGG:ath:AT5G19990 TAIR:At5g19990 InParanoid:Q9C5U3 KO:K03066
OMA:QNIKVIM PhylomeDB:Q9C5U3 ProtClustDB:CLSN2687185 Uniprot:Q9C5U3
Length = 419
Score = 376 (137.4 bits), Expect = 1.9e-39, Sum P(2) = 1.9e-39
Identities = 76/159 (47%), Positives = 105/159 (66%)
Query: 15 FIRVVGSEFVQKYLGEGPRMVRDVFRLAKENSPXXXXXXXXXXXXTKRFDAQTG-ADREV 73
FIRV GSE VQKY+GEG RMVR++F +A+E++P + R ++ +G D EV
Sbjct: 223 FIRVSGSELVQKYIGEGSRMVRELFVMAREHAPSIIFMDEIDSIGSARMESGSGNGDSEV 282
Query: 74 QRILLELLNQMDGFDQTTNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLVF 133
QR +LELLNQ+DGF+ + +KV+MATNR D LD ALLRPGR+DRKIEFP P+ + +
Sbjct: 283 QRTMLELLNQLDGFEASNKIKVLMATNRIDILDQALLRPGRIDRKIEFPNPNEESRFDIL 342
Query: 134 STITAKMNLSDEVDLEDYVARPDRISGADINAICQEVIM 172
+ KMNL +DL+ + + SGA++ A+C E M
Sbjct: 343 KIHSRKMNLMRGIDLKKIAEKMNGASGAELKAVCTEAGM 381
Score = 235 (87.8 bits), Expect = 8.6e-18, P = 8.6e-18
Identities = 48/101 (47%), Positives = 65/101 (64%)
Query: 224 LQVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLVFSTITAKMNLSDEVDLEDYV 283
++V+MATNR D LD ALLRPGR+DRKIEFP P+ + + + KMNL +DL+
Sbjct: 302 IKVLMATNRIDILDQALLRPGRIDRKIEFPNPNEESRFDILKIHSRKMNLMRGIDLKKIA 361
Query: 284 ARPDRISGADINAICQEAGMHAVRENRYIVLPKDFEKGYKK 324
+ + SGA++ A+C EAGM A+RE R V +DFE K
Sbjct: 362 EKMNGASGAELKAVCTEAGMFALRERRVHVTQEDFEMAVAK 402
Score = 143 (55.4 bits), Expect = 3.6e-09, Sum P(2) = 3.6e-09
Identities = 31/65 (47%), Positives = 40/65 (61%)
Query: 169 EVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLVFSTITAKMNFMLNIGNLQVIM 228
+V+MATNR D LD ALLRPGR+DRKIEFP P+ + + + KMN M I ++
Sbjct: 303 KVLMATNRIDILDQALLRPGRIDRKIEFPNPNEESRFDILKIHSRKMNLMRGIDLKKIAE 362
Query: 229 ATNRA 233
N A
Sbjct: 363 KMNGA 367
Score = 61 (26.5 bits), Expect = 1.9e-39, Sum P(2) = 1.9e-39
Identities = 17/41 (41%), Positives = 24/41 (58%)
Query: 326 AGMHAVRENRYIVLPKDFE----KGYKNNTKKDESEHEFYK 362
AGM A+RE R V +DFE K K +T+K+ S + +K
Sbjct: 379 AGMFALRERRVHVTQEDFEMAVAKVMKKDTEKNMSLRKLWK 419
>TAIR|locus:2147685 [details] [associations]
symbol:AT5G20000 species:3702 "Arabidopsis thaliana"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=ISM;TAS]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=ISS]
[GO:0008540 "proteasome regulatory particle, base subcomplex"
evidence=ISS] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0016887 "ATPase activity" evidence=ISS] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0000502 "proteasome
complex" evidence=IDA] [GO:0005829 "cytosol" evidence=RCA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 EMBL:CP002688
GenomeReviews:BA000015_GR GO:GO:0030163 GO:GO:0000502 HSSP:Q01853
GO:GO:0017111 EMBL:AF296836 eggNOG:COG1222 TIGRFAMs:TIGR01242
HOGENOM:HOG000225143 KO:K03066 ProtClustDB:CLSN2687185
EMBL:AY039965 EMBL:AY079403 EMBL:AK226206 EMBL:AY087503
IPI:IPI00530138 RefSeq:NP_197500.1 UniGene:At.51251
ProteinModelPortal:Q94BQ2 SMR:Q94BQ2 IntAct:Q94BQ2 STRING:Q94BQ2
PaxDb:Q94BQ2 PRIDE:Q94BQ2 EnsemblPlants:AT5G20000.1 GeneID:832122
KEGG:ath:AT5G20000 GeneFarm:1515 TAIR:At5g20000 InParanoid:Q94BQ2
OMA:TEILRIH PhylomeDB:Q94BQ2 Uniprot:Q94BQ2
Length = 419
Score = 376 (137.4 bits), Expect = 1.9e-39, Sum P(2) = 1.9e-39
Identities = 76/159 (47%), Positives = 105/159 (66%)
Query: 15 FIRVVGSEFVQKYLGEGPRMVRDVFRLAKENSPXXXXXXXXXXXXTKRFDAQTG-ADREV 73
FIRV GSE VQKY+GEG RMVR++F +A+E++P + R ++ +G D EV
Sbjct: 223 FIRVSGSELVQKYIGEGSRMVRELFVMAREHAPSIIFMDEIDSIGSARMESGSGNGDSEV 282
Query: 74 QRILLELLNQMDGFDQTTNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLVF 133
QR +LELLNQ+DGF+ + +KV+MATNR D LD ALLRPGR+DRKIEFP P+ + +
Sbjct: 283 QRTMLELLNQLDGFEASNKIKVLMATNRIDILDQALLRPGRIDRKIEFPNPNEESRFDIL 342
Query: 134 STITAKMNLSDEVDLEDYVARPDRISGADINAICQEVIM 172
+ KMNL +DL+ + + SGA++ A+C E M
Sbjct: 343 KIHSRKMNLMRGIDLKKIAEKMNGASGAELKAVCTEAGM 381
Score = 235 (87.8 bits), Expect = 8.6e-18, P = 8.6e-18
Identities = 48/101 (47%), Positives = 65/101 (64%)
Query: 224 LQVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLVFSTITAKMNLSDEVDLEDYV 283
++V+MATNR D LD ALLRPGR+DRKIEFP P+ + + + KMNL +DL+
Sbjct: 302 IKVLMATNRIDILDQALLRPGRIDRKIEFPNPNEESRFDILKIHSRKMNLMRGIDLKKIA 361
Query: 284 ARPDRISGADINAICQEAGMHAVRENRYIVLPKDFEKGYKK 324
+ + SGA++ A+C EAGM A+RE R V +DFE K
Sbjct: 362 EKMNGASGAELKAVCTEAGMFALRERRVHVTQEDFEMAVAK 402
Score = 143 (55.4 bits), Expect = 3.6e-09, Sum P(2) = 3.6e-09
Identities = 31/65 (47%), Positives = 40/65 (61%)
Query: 169 EVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLVFSTITAKMNFMLNIGNLQVIM 228
+V+MATNR D LD ALLRPGR+DRKIEFP P+ + + + KMN M I ++
Sbjct: 303 KVLMATNRIDILDQALLRPGRIDRKIEFPNPNEESRFDILKIHSRKMNLMRGIDLKKIAE 362
Query: 229 ATNRA 233
N A
Sbjct: 363 KMNGA 367
Score = 61 (26.5 bits), Expect = 1.9e-39, Sum P(2) = 1.9e-39
Identities = 17/41 (41%), Positives = 24/41 (58%)
Query: 326 AGMHAVRENRYIVLPKDFE----KGYKNNTKKDESEHEFYK 362
AGM A+RE R V +DFE K K +T+K+ S + +K
Sbjct: 379 AGMFALRERRVHVTQEDFEMAVAKVMKKDTEKNMSLRKLWK 419
>FB|FBgn0028685 [details] [associations]
symbol:Rpt4 "Regulatory particle triple-A ATPase 4"
species:7227 "Drosophila melanogaster" [GO:0008540 "proteasome
regulatory particle, base subcomplex" evidence=ISS;NAS] [GO:0006508
"proteolysis" evidence=ISS;IDA] [GO:0004175 "endopeptidase
activity" evidence=IDA] [GO:0005838 "proteasome regulatory
particle" evidence=ISS;IDA] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0005875 "microtubule associated
complex" evidence=IDA] [GO:0022008 "neurogenesis" evidence=IMP]
[GO:1901838 "positive regulation of transcription of nuclear large
rRNA transcript from RNA polymerase I promoter" evidence=IMP]
[GO:0005634 "nucleus" evidence=IDA] [GO:0001163 "RNA polymerase I
regulatory region sequence-specific DNA binding" evidence=IDA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0005737 GO:GO:0005875 GO:GO:0022008
GO:GO:0006508 GO:GO:0016887 GO:GO:0004175 GO:GO:0030163 HSSP:Q01853
TIGRFAMs:TIGR01242 GO:GO:0008540 EMBL:AY071182
ProteinModelPortal:Q8SZ19 SMR:Q8SZ19 IntAct:Q8SZ19 STRING:Q8SZ19
PRIDE:Q8SZ19 FlyBase:FBgn0028685 InParanoid:Q8SZ19
OrthoDB:EOG43TX9X ChiTaRS:Rpt4 ArrayExpress:Q8SZ19 Bgee:Q8SZ19
Uniprot:Q8SZ19
Length = 397
Score = 383 (139.9 bits), Expect = 3.2e-39, Sum P(2) = 3.2e-39
Identities = 83/178 (46%), Positives = 109/178 (61%)
Query: 2 LLCTSFDTELVTAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENSPXXXXXXXXXXXXTK 61
LL + ++L F++VV S V KY+GE R++R++F A+++ P +
Sbjct: 190 LLARAVASQLDANFLKVVSSAIVDKYIGESARLIREMFNYARDHQPCIIFMDEIDAIGGR 249
Query: 62 RFDAQTGADREVQRILLELLNQMDGFDQTTNVKVIMATNRADTLDPALLRPGRLDRKIEF 121
RF T ADRE+QR L+ELLNQMDGFD VK+IMATNR D+LDPALLRPGRLDRKIE
Sbjct: 250 RFSEGTSADREIQRTLMELLNQMDGFDSLGQVKMIMATNRPDSLDPALLRPGRLDRKIEI 309
Query: 122 PLPDRRQKRLVFSTITA-KMNLSDEVDLEDYVARPDRISGADINAICQEVIMATNRAD 178
PLP+ Q RL I A K+ E+D E V D +GAD+ +C E + RA+
Sbjct: 310 PLPNE-QARLEILKIHALKIAKHGEIDYEAIVKLSDNFNGADLRNVCTEAGLFAIRAE 366
Score = 251 (93.4 bits), Expect = 2.8e-20, P = 2.8e-20
Identities = 57/126 (45%), Positives = 78/126 (61%)
Query: 200 DRRQKRLVFSTITAKMNFMLNIGNLQVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQ 259
DR +R + + +M+ ++G +++IMATNR D+LDPALLRPGRLDRKIE PLP+ Q
Sbjct: 258 DREIQRTLMELLN-QMDGFDSLGQVKMIMATNRPDSLDPALLRPGRLDRKIEIPLPNE-Q 315
Query: 260 KRLVFSTITA-KMNLSDEVDLEDYVARPDRISGADINAICQEAGMHAVRENRYIVLPKDF 318
RL I A K+ E+D E V D +GAD+ +C EAG+ A+R R V+ DF
Sbjct: 316 ARLEILKIHALKIAKHGEIDYEAIVKLSDNFNGADLRNVCTEAGLFAIRAEREYVIQGDF 375
Query: 319 EKGYKK 324
K +K
Sbjct: 376 MKAVRK 381
Score = 142 (55.0 bits), Expect = 3.2e-08, Sum P(2) = 3.2e-08
Identities = 31/45 (68%), Positives = 35/45 (77%)
Query: 169 EVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLVFSTITA 213
++IMATNR D+LDPALLRPGRLDRKIE PLP+ Q RL I A
Sbjct: 282 KMIMATNRPDSLDPALLRPGRLDRKIEIPLPNE-QARLEILKIHA 325
Score = 52 (23.4 bits), Expect = 3.2e-39, Sum P(2) = 3.2e-39
Identities = 13/37 (35%), Positives = 22/37 (59%)
Query: 326 AGMHAVRENRYIVLPKDFEKGYK--NNTKKDESEHEF 360
AG+ A+R R V+ DF K + ++ KK ES+ ++
Sbjct: 358 AGLFAIRAEREYVIQGDFMKAVRKVSDNKKLESKLDY 394
>GENEDB_PFALCIPARUM|PFL2345c [details] [associations]
symbol:PFL2345c "tat-binding protein homolog"
species:5833 "Plasmodium falciparum" [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=ISS]
[GO:0003712 "transcription cofactor activity" evidence=ISS]
[GO:0000502 "proteasome complex" evidence=ISS] [GO:0016887 "ATPase
activity" evidence=ISS] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005737 EMBL:AE014188
GO:GO:0006511 HSSP:Q01853 GO:GO:0017111 TIGRFAMs:TIGR01242
HOGENOM:HOG000225143 KO:K03066 OMA:QNIKVIM ProtClustDB:CLSZ2429412
RefSeq:XP_001350873.1 ProteinModelPortal:Q8I4U5 IntAct:Q8I4U5
MINT:MINT-1544609 PRIDE:Q8I4U5 EnsemblProtists:PFL2345c:mRNA
GeneID:811521 KEGG:pfa:PFL2345c EuPathDB:PlasmoDB:PF3D7_1248900
Uniprot:Q8I4U5
Length = 435
Score = 377 (137.8 bits), Expect = 4.0e-39, Sum P(2) = 4.0e-39
Identities = 76/158 (48%), Positives = 103/158 (65%)
Query: 15 FIRVVGSEFVQKYLGEGPRMVRDVFRLAKENSPXXXXXXXXXXXXTKRFDAQTGADREVQ 74
FIRV GSE VQKY+GEG RMVR++F +A+E++P ++R + + G D EVQ
Sbjct: 241 FIRVSGSELVQKYIGEGSRMVRELFVMAREHAPSIIFMDEIDSIGSQRIEGEHG-DSEVQ 299
Query: 75 RILLELLNQMDGFDQTTNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLVFS 134
R ++ELLNQ+DGF+ T N+KVIM TNR D LD ALLRPGR+DRKIEFP P+ + +
Sbjct: 300 RTMMELLNQLDGFESTQNIKVIMCTNRIDILDEALLRPGRIDRKIEFPNPNVEARMEILK 359
Query: 135 TITAKMNLSDEVDLEDYVARPDRISGADINAICQEVIM 172
+ KMNL +D+ + SGA++ A+C E M
Sbjct: 360 IHSRKMNLMRGIDMLKIATDMNNCSGAEVKAVCTEAGM 397
Score = 232 (86.7 bits), Expect = 2.4e-17, P = 2.4e-17
Identities = 48/102 (47%), Positives = 63/102 (61%)
Query: 223 NLQVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLVFSTITAKMNLSDEVDLEDY 282
N++VIM TNR D LD ALLRPGR+DRKIEFP P+ + + + KMNL +D+
Sbjct: 317 NIKVIMCTNRIDILDEALLRPGRIDRKIEFPNPNVEARMEILKIHSRKMNLMRGIDMLKI 376
Query: 283 VARPDRISGADINAICQEAGMHAVRENRYIVLPKDFEKGYKK 324
+ SGA++ A+C EAGM A+RE R V +DFE K
Sbjct: 377 ATDMNNCSGAEVKAVCTEAGMFALRERRVHVTQEDFEMAVAK 418
Score = 145 (56.1 bits), Expect = 6.2e-09, Sum P(2) = 6.2e-09
Identities = 31/63 (49%), Positives = 39/63 (61%)
Query: 169 EVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLVFSTITAKMNFMLNIGNLQVIM 228
+VIM TNR D LD ALLRPGR+DRKIEFP P+ + + + KMN M I L++
Sbjct: 319 KVIMCTNRIDILDEALLRPGRIDRKIEFPNPNVEARMEILKIHSRKMNLMRGIDMLKIAT 378
Query: 229 ATN 231
N
Sbjct: 379 DMN 381
Score = 57 (25.1 bits), Expect = 4.0e-39, Sum P(2) = 4.0e-39
Identities = 15/35 (42%), Positives = 19/35 (54%)
Query: 326 AGMHAVRENRYIVLPKDFEKGYKNNTKKDESEHEF 360
AGM A+RE R V +DFE K+D +E F
Sbjct: 395 AGMFALRERRVHVTQEDFEMAVAKVMKQD-AEKNF 428
>UNIPROTKB|Q8I4U5 [details] [associations]
symbol:PFL2345c "Tat-binding protein homolog" species:36329
"Plasmodium falciparum 3D7" [GO:0006511 "ubiquitin-dependent
protein catabolic process" evidence=ISS] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GO:GO:0005737 EMBL:AE014188 GO:GO:0006511 HSSP:Q01853 GO:GO:0017111
TIGRFAMs:TIGR01242 HOGENOM:HOG000225143 KO:K03066 OMA:QNIKVIM
ProtClustDB:CLSZ2429412 RefSeq:XP_001350873.1
ProteinModelPortal:Q8I4U5 IntAct:Q8I4U5 MINT:MINT-1544609
PRIDE:Q8I4U5 EnsemblProtists:PFL2345c:mRNA GeneID:811521
KEGG:pfa:PFL2345c EuPathDB:PlasmoDB:PF3D7_1248900 Uniprot:Q8I4U5
Length = 435
Score = 377 (137.8 bits), Expect = 4.0e-39, Sum P(2) = 4.0e-39
Identities = 76/158 (48%), Positives = 103/158 (65%)
Query: 15 FIRVVGSEFVQKYLGEGPRMVRDVFRLAKENSPXXXXXXXXXXXXTKRFDAQTGADREVQ 74
FIRV GSE VQKY+GEG RMVR++F +A+E++P ++R + + G D EVQ
Sbjct: 241 FIRVSGSELVQKYIGEGSRMVRELFVMAREHAPSIIFMDEIDSIGSQRIEGEHG-DSEVQ 299
Query: 75 RILLELLNQMDGFDQTTNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLVFS 134
R ++ELLNQ+DGF+ T N+KVIM TNR D LD ALLRPGR+DRKIEFP P+ + +
Sbjct: 300 RTMMELLNQLDGFESTQNIKVIMCTNRIDILDEALLRPGRIDRKIEFPNPNVEARMEILK 359
Query: 135 TITAKMNLSDEVDLEDYVARPDRISGADINAICQEVIM 172
+ KMNL +D+ + SGA++ A+C E M
Sbjct: 360 IHSRKMNLMRGIDMLKIATDMNNCSGAEVKAVCTEAGM 397
Score = 232 (86.7 bits), Expect = 2.4e-17, P = 2.4e-17
Identities = 48/102 (47%), Positives = 63/102 (61%)
Query: 223 NLQVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLVFSTITAKMNLSDEVDLEDY 282
N++VIM TNR D LD ALLRPGR+DRKIEFP P+ + + + KMNL +D+
Sbjct: 317 NIKVIMCTNRIDILDEALLRPGRIDRKIEFPNPNVEARMEILKIHSRKMNLMRGIDMLKI 376
Query: 283 VARPDRISGADINAICQEAGMHAVRENRYIVLPKDFEKGYKK 324
+ SGA++ A+C EAGM A+RE R V +DFE K
Sbjct: 377 ATDMNNCSGAEVKAVCTEAGMFALRERRVHVTQEDFEMAVAK 418
Score = 145 (56.1 bits), Expect = 6.2e-09, Sum P(2) = 6.2e-09
Identities = 31/63 (49%), Positives = 39/63 (61%)
Query: 169 EVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLVFSTITAKMNFMLNIGNLQVIM 228
+VIM TNR D LD ALLRPGR+DRKIEFP P+ + + + KMN M I L++
Sbjct: 319 KVIMCTNRIDILDEALLRPGRIDRKIEFPNPNVEARMEILKIHSRKMNLMRGIDMLKIAT 378
Query: 229 ATN 231
N
Sbjct: 379 DMN 381
Score = 57 (25.1 bits), Expect = 4.0e-39, Sum P(2) = 4.0e-39
Identities = 15/35 (42%), Positives = 19/35 (54%)
Query: 326 AGMHAVRENRYIVLPKDFEKGYKNNTKKDESEHEF 360
AGM A+RE R V +DFE K+D +E F
Sbjct: 395 AGMFALRERRVHVTQEDFEMAVAKVMKQD-AEKNF 428
>DICTYBASE|DDB_G0284415 [details] [associations]
symbol:psmC3 "26S proteasome ATPase 3 subunit"
species:44689 "Dictyostelium discoideum" [GO:0045335 "phagocytic
vesicle" evidence=IDA] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0000502 "proteasome
complex" evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 dictyBase:DDB_G0284415 GO:GO:0005524 GO:GO:0005634
GO:GO:0045335 GenomeReviews:CM000153_GR GO:GO:0030163 GO:GO:0000502
HSSP:Q01853 GO:GO:0017111 EMBL:AAFI02000064 eggNOG:COG1222
TIGRFAMs:TIGR01242 KO:K03065 HOGENOM:HOG000225143
RefSeq:XP_638617.1 ProteinModelPortal:Q54PN7 STRING:Q54PN7
PRIDE:Q54PN7 EnsemblProtists:DDB0232967 GeneID:8624588
KEGG:ddi:DDB_G0284415 InParanoid:Q54PN7 OMA:GALMYGP
ProtClustDB:CLSZ2433711 Uniprot:Q54PN7
Length = 421
Score = 393 (143.4 bits), Expect = 5.1e-39, Sum P(2) = 5.1e-39
Identities = 77/179 (43%), Positives = 110/179 (61%)
Query: 2 LLCTSFDTELVTAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENSPXXXXXXXXXXXXTK 61
LL + + + ++++ G + VQ ++G+G ++VRD F LAKE P TK
Sbjct: 217 LLARACAAQTNSTYLKLAGPQLVQMFIGDGAKLVRDAFALAKEKGPTIIFIDELDAIGTK 276
Query: 62 RFDAQTGADREVQRILLELLNQMDGFDQTTNVKVIMATNRADTLDPALLRPGRLDRKIEF 121
RFD++ DREVQR +LELLNQ+DGF N+KVI ATNR D LDPALLR GRLDRKIEF
Sbjct: 277 RFDSEVSGDREVQRTMLELLNQLDGFSSDANIKVIAATNRIDILDPALLRSGRLDRKIEF 336
Query: 122 PLPDRRQKRLVFSTITAKMNLSDEVDLEDYVARPDRISGADINAICQEV-IMATNRADT 179
PLP+ + + + KMN+S +V+ ++ + +GA + A+C E ++A R T
Sbjct: 337 PLPNEEARAHILQIHSRKMNVSADVNFDELARSSEDFNGAQLKAVCVEAGMIALRRGGT 395
Score = 230 (86.0 bits), Expect = 3.9e-17, P = 3.9e-17
Identities = 49/122 (40%), Positives = 72/122 (59%)
Query: 200 DRRQKRLVFSTITAKMNFMLNIGNLQVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQ 259
DR +R + + F + N++VI ATNR D LDPALLR GRLDRKIEFPLP+
Sbjct: 285 DREVQRTMLELLNQLDGFSSD-ANIKVIAATNRIDILDPALLRSGRLDRKIEFPLPNEEA 343
Query: 260 KRLVFSTITAKMNLSDEVDLEDYVARPDRISGADINAICQEAGMHAVRENRYIVLPKDFE 319
+ + + KMN+S +V+ ++ + +GA + A+C EAGM A+R ++ DF
Sbjct: 344 RAHILQIHSRKMNVSADVNFDELARSSEDFNGAQLKAVCVEAGMIALRRGGTELIHNDFV 403
Query: 320 KG 321
+G
Sbjct: 404 EG 405
Score = 143 (55.4 bits), Expect = 5.3e-07, Sum P(2) = 5.3e-07
Identities = 29/53 (54%), Positives = 36/53 (67%)
Query: 169 EVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLVFSTITAKMNFMLNI 221
+VI ATNR D LDPALLR GRLDRKIEFPLP+ + + + KMN ++
Sbjct: 309 KVIAATNRIDILDPALLRSGRLDRKIEFPLPNEEARAHILQIHSRKMNVSADV 361
Score = 40 (19.1 bits), Expect = 5.1e-39, Sum P(2) = 5.1e-39
Identities = 11/36 (30%), Positives = 17/36 (47%)
Query: 326 AGMHAVRENRYIVLPKDFEKGYKNNTKKDESEHEFY 361
AGM A+R ++ DF +G K + E+Y
Sbjct: 385 AGMIALRRGGTELIHNDFVEGCVEVMAKKKKTLEYY 420
>WB|WBGene00004504 [details] [associations]
symbol:rpt-4 species:6239 "Caenorhabditis elegans"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0030163 "protein
catabolic process" evidence=IEA] [GO:0006281 "DNA repair"
evidence=IEA] [GO:0006310 "DNA recombination" evidence=IEA]
[GO:0009378 "four-way junction helicase activity" evidence=IEA]
[GO:0040010 "positive regulation of growth rate" evidence=IMP]
[GO:0009792 "embryo development ending in birth or egg hatching"
evidence=IMP] [GO:0010171 "body morphogenesis" evidence=IMP]
[GO:0040011 "locomotion" evidence=IMP] [GO:0000003 "reproduction"
evidence=IMP] [GO:0002119 "nematode larval development"
evidence=IMP] [GO:0008340 "determination of adult lifespan"
evidence=IMP] [GO:0008540 "proteasome regulatory particle, base
subcomplex" evidence=ISS] [GO:0005515 "protein binding"
evidence=IPI] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005634 GO:GO:0008340
GO:GO:0009792 GO:GO:0005737 GO:GO:0040010 GO:GO:0002119
GO:GO:0010171 GO:GO:0040011 GO:GO:0000003 GO:GO:0030163
GO:GO:0017111 KO:K03064 eggNOG:COG1222 TIGRFAMs:TIGR01242
HOGENOM:HOG000225143 EMBL:FO080251 PIR:T32268 RefSeq:NP_001022113.1
RefSeq:NP_001022114.1 ProteinModelPortal:O17071 SMR:O17071
IntAct:O17071 MINT:MINT-210603 STRING:O17071 PaxDb:O17071
PRIDE:O17071 EnsemblMetazoa:F23F1.8a GeneID:173384
KEGG:cel:CELE_F23F1.8 UCSC:F23F1.8a CTD:173384 WormBase:F23F1.8a
WormBase:F23F1.8b GeneTree:ENSGT00550000074826 InParanoid:O17071
OMA:EHKEVES NextBio:879415 GO:GO:0008540 Uniprot:O17071
Length = 406
Score = 381 (139.2 bits), Expect = 5.1e-39, Sum P(2) = 5.1e-39
Identities = 80/177 (45%), Positives = 106/177 (59%)
Query: 2 LLCTSFDTELVTAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENSPXXXXXXXXXXXXTK 61
LL + ++L F++VV S V KY+GE RM+R++F A+++ P +
Sbjct: 199 LLARAVASQLDCNFLKVVSSAIVDKYIGESARMIREMFNYARDHQPCIVFMDEIDAIGGR 258
Query: 62 RFDAQTGADREVQRILLELLNQMDGFDQTTNVKVIMATNRADTLDPALLRPGRLDRKIEF 121
RF T ADRE+QR L+ELLNQ+DGFD VKVIMATNR DTLDPALLRPGRLDRKIE
Sbjct: 259 RFSEGTSADREIQRTLMELLNQLDGFDSLGKVKVIMATNRPDTLDPALLRPGRLDRKIEI 318
Query: 122 PLPDRRQKRLVFSTITAKMNLSDEVDLEDYVARPDRISGADINAICQEVIMATNRAD 178
LP+ + + + + K+ E+D E V D S AD+ +C E M RA+
Sbjct: 319 GLPNEQSRLEILKIHSNKITKHGEIDFEAVVKLSDGFSAADLRNVCTEAGMFAIRAE 375
Score = 251 (93.4 bits), Expect = 3.3e-20, P = 3.3e-20
Identities = 54/125 (43%), Positives = 74/125 (59%)
Query: 200 DRRQKRLVFSTITAKMNFMLNIGNLQVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQ 259
DR +R + + F ++G ++VIMATNR DTLDPALLRPGRLDRKIE LP+ +
Sbjct: 267 DREIQRTLMELLNQLDGFD-SLGKVKVIMATNRPDTLDPALLRPGRLDRKIEIGLPNEQS 325
Query: 260 KRLVFSTITAKMNLSDEVDLEDYVARPDRISGADINAICQEAGMHAVRENRYIVLPKDFE 319
+ + + K+ E+D E V D S AD+ +C EAGM A+R R V+ +DF
Sbjct: 326 RLEILKIHSNKITKHGEIDFEAVVKLSDGFSAADLRNVCTEAGMFAIRAEREFVIDEDFM 385
Query: 320 KGYKK 324
K +K
Sbjct: 386 KAVRK 390
Score = 141 (54.7 bits), Expect = 4.6e-08, Sum P(2) = 4.6e-08
Identities = 37/74 (50%), Positives = 43/74 (58%)
Query: 169 EVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLVFSTITAKMNFMLNIGNLQVIM 228
+VIMATNR DTLDPALLRPGRLDRKIE LP+ Q RL I + N + G +
Sbjct: 291 KVIMATNRPDTLDPALLRPGRLDRKIEIGLPNE-QSRLEILKIHS--NKITKHGEIDFEA 347
Query: 229 ATNRADTLDPALLR 242
+D A LR
Sbjct: 348 VVKLSDGFSAADLR 361
Score = 52 (23.4 bits), Expect = 5.1e-39, Sum P(2) = 5.1e-39
Identities = 12/37 (32%), Positives = 22/37 (59%)
Query: 326 AGMHAVRENRYIVLPKDFEKGYKN--NTKKDESEHEF 360
AGM A+R R V+ +DF K + + K+ E++ ++
Sbjct: 367 AGMFAIRAEREFVIDEDFMKAVRKVGDAKRLETKLDY 403
>UNIPROTKB|O17071 [details] [associations]
symbol:rpt-4 "Probable 26S protease regulatory subunit 10B"
species:6239 "Caenorhabditis elegans" [GO:0042802 "identical
protein binding" evidence=IPI] [GO:0005515 "protein binding"
evidence=IPI] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005634 GO:GO:0008340
GO:GO:0009792 GO:GO:0005737 GO:GO:0040010 GO:GO:0002119
GO:GO:0010171 GO:GO:0040011 GO:GO:0000003 GO:GO:0030163
GO:GO:0017111 KO:K03064 eggNOG:COG1222 TIGRFAMs:TIGR01242
HOGENOM:HOG000225143 EMBL:FO080251 PIR:T32268 RefSeq:NP_001022113.1
RefSeq:NP_001022114.1 ProteinModelPortal:O17071 SMR:O17071
IntAct:O17071 MINT:MINT-210603 STRING:O17071 PaxDb:O17071
PRIDE:O17071 EnsemblMetazoa:F23F1.8a GeneID:173384
KEGG:cel:CELE_F23F1.8 UCSC:F23F1.8a CTD:173384 WormBase:F23F1.8a
WormBase:F23F1.8b GeneTree:ENSGT00550000074826 InParanoid:O17071
OMA:EHKEVES NextBio:879415 GO:GO:0008540 Uniprot:O17071
Length = 406
Score = 381 (139.2 bits), Expect = 5.1e-39, Sum P(2) = 5.1e-39
Identities = 80/177 (45%), Positives = 106/177 (59%)
Query: 2 LLCTSFDTELVTAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENSPXXXXXXXXXXXXTK 61
LL + ++L F++VV S V KY+GE RM+R++F A+++ P +
Sbjct: 199 LLARAVASQLDCNFLKVVSSAIVDKYIGESARMIREMFNYARDHQPCIVFMDEIDAIGGR 258
Query: 62 RFDAQTGADREVQRILLELLNQMDGFDQTTNVKVIMATNRADTLDPALLRPGRLDRKIEF 121
RF T ADRE+QR L+ELLNQ+DGFD VKVIMATNR DTLDPALLRPGRLDRKIE
Sbjct: 259 RFSEGTSADREIQRTLMELLNQLDGFDSLGKVKVIMATNRPDTLDPALLRPGRLDRKIEI 318
Query: 122 PLPDRRQKRLVFSTITAKMNLSDEVDLEDYVARPDRISGADINAICQEVIMATNRAD 178
LP+ + + + + K+ E+D E V D S AD+ +C E M RA+
Sbjct: 319 GLPNEQSRLEILKIHSNKITKHGEIDFEAVVKLSDGFSAADLRNVCTEAGMFAIRAE 375
Score = 251 (93.4 bits), Expect = 3.3e-20, P = 3.3e-20
Identities = 54/125 (43%), Positives = 74/125 (59%)
Query: 200 DRRQKRLVFSTITAKMNFMLNIGNLQVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQ 259
DR +R + + F ++G ++VIMATNR DTLDPALLRPGRLDRKIE LP+ +
Sbjct: 267 DREIQRTLMELLNQLDGFD-SLGKVKVIMATNRPDTLDPALLRPGRLDRKIEIGLPNEQS 325
Query: 260 KRLVFSTITAKMNLSDEVDLEDYVARPDRISGADINAICQEAGMHAVRENRYIVLPKDFE 319
+ + + K+ E+D E V D S AD+ +C EAGM A+R R V+ +DF
Sbjct: 326 RLEILKIHSNKITKHGEIDFEAVVKLSDGFSAADLRNVCTEAGMFAIRAEREFVIDEDFM 385
Query: 320 KGYKK 324
K +K
Sbjct: 386 KAVRK 390
Score = 141 (54.7 bits), Expect = 4.6e-08, Sum P(2) = 4.6e-08
Identities = 37/74 (50%), Positives = 43/74 (58%)
Query: 169 EVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLVFSTITAKMNFMLNIGNLQVIM 228
+VIMATNR DTLDPALLRPGRLDRKIE LP+ Q RL I + N + G +
Sbjct: 291 KVIMATNRPDTLDPALLRPGRLDRKIEIGLPNE-QSRLEILKIHS--NKITKHGEIDFEA 347
Query: 229 ATNRADTLDPALLR 242
+D A LR
Sbjct: 348 VVKLSDGFSAADLR 361
Score = 52 (23.4 bits), Expect = 5.1e-39, Sum P(2) = 5.1e-39
Identities = 12/37 (32%), Positives = 22/37 (59%)
Query: 326 AGMHAVRENRYIVLPKDFEKGYKN--NTKKDESEHEF 360
AGM A+R R V+ +DF K + + K+ E++ ++
Sbjct: 367 AGMFAIRAEREFVIDEDFMKAVRKVGDAKRLETKLDY 403
>UNIPROTKB|Q9FXT8 [details] [associations]
symbol:OsRPT4 "Os02g0199900 protein" species:39947 "Oryza
sativa Japonica Group" [GO:0005515 "protein binding" evidence=IPI]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005886 GO:GO:0005524 GO:GO:0005737 GO:GO:0005618
GO:GO:0005730 GO:GO:0030163 HSSP:Q01853 GO:GO:0017111 EMBL:AP008208
EMBL:CM000139 KO:K03064 EMBL:AP004869 TIGRFAMs:TIGR01242
OMA:EHKEVES GO:GO:0008540 ProtClustDB:CLSN2679874 EMBL:AP004812
EMBL:AB033536 RefSeq:NP_001046218.1 UniGene:Os.292 IntAct:Q9FXT8
STRING:Q9FXT8 EnsemblPlants:LOC_Os02g10640.1 GeneID:4328642
KEGG:osa:4328642 Uniprot:Q9FXT8
Length = 400
Score = 376 (137.4 bits), Expect = 5.1e-39, Sum P(2) = 5.1e-39
Identities = 76/177 (42%), Positives = 107/177 (60%)
Query: 2 LLCTSFDTELVTAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENSPXXXXXXXXXXXXTK 61
LL + + + F+++V S + KY+GE R++R++F A+++ P +
Sbjct: 189 LLARAIASNIDANFLKIVSSAIIDKYIGESARLIREMFGYARDHQPCIIFMDEIDAIGGR 248
Query: 62 RFDAQTGADREVQRILLELLNQMDGFDQTTNVKVIMATNRADTLDPALLRPGRLDRKIEF 121
RF T ADRE+QR L+ELLNQ+DGFD+ VK+IMATNR D LDPALLRPGRLDRKIE
Sbjct: 249 RFSEGTSADREIQRTLMELLNQLDGFDELGKVKMIMATNRPDVLDPALLRPGRLDRKIEI 308
Query: 122 PLPDRRQKRLVFSTITAKMNLSDEVDLEDYVARPDRISGADINAICQEVIMATNRAD 178
PLP+ + + V A + E+D E V + +GAD+ +C E MA RA+
Sbjct: 309 PLPNEQARMEVLKIHAAGIAKHGEIDYEAVVKLAEGFNGADLRNVCTEAGMAAIRAE 365
Score = 241 (89.9 bits), Expect = 1.1e-18, P = 1.1e-18
Identities = 53/125 (42%), Positives = 73/125 (58%)
Query: 200 DRRQKRLVFSTITAKMNFMLNIGNLQVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQ 259
DR +R + + F +G +++IMATNR D LDPALLRPGRLDRKIE PLP+ +
Sbjct: 257 DREIQRTLMELLNQLDGFD-ELGKVKMIMATNRPDVLDPALLRPGRLDRKIEIPLPNEQA 315
Query: 260 KRLVFSTITAKMNLSDEVDLEDYVARPDRISGADINAICQEAGMHAVRENRYIVLPKDFE 319
+ V A + E+D E V + +GAD+ +C EAGM A+R R V+ +DF
Sbjct: 316 RMEVLKIHAAGIAKHGEIDYEAVVKLAEGFNGADLRNVCTEAGMAAIRAERDYVVHEDFM 375
Query: 320 KGYKK 324
K +K
Sbjct: 376 KAVRK 380
Score = 138 (53.6 bits), Expect = 2.9e-08, Sum P(2) = 2.9e-08
Identities = 26/36 (72%), Positives = 31/36 (86%)
Query: 169 EVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQK 204
++IMATNR D LDPALLRPGRLDRKIE PLP+ + +
Sbjct: 281 KMIMATNRPDVLDPALLRPGRLDRKIEIPLPNEQAR 316
Score = 57 (25.1 bits), Expect = 5.1e-39, Sum P(2) = 5.1e-39
Identities = 15/37 (40%), Positives = 21/37 (56%)
Query: 326 AGMHAVRENRYIVLPKDFEKGYK--NNTKKDESEHEF 360
AGM A+R R V+ +DF K + N+ KK ES +
Sbjct: 357 AGMAAIRAERDYVVHEDFMKAVRKLNDAKKLESSAHY 393
>UNIPROTKB|P46470 [details] [associations]
symbol:psmc5 "26S protease regulatory subunit 8"
species:8355 "Xenopus laevis" [GO:0022624 "proteasome accessory
complex" evidence=ISS] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737
GO:GO:0030163 GO:GO:0017111 TIGRFAMs:TIGR01242 HOVERGEN:HBG000109
GO:GO:0022624 KO:K03066 CTD:5705 EMBL:X81986 RefSeq:NP_001081635.1
UniGene:Xl.45 ProteinModelPortal:P46470 PRIDE:P46470 GeneID:397968
KEGG:xla:397968 Uniprot:P46470
Length = 461
Score = 370 (135.3 bits), Expect = 6.5e-39, Sum P(2) = 6.5e-39
Identities = 76/158 (48%), Positives = 102/158 (64%)
Query: 15 FIRVVGSEFVQKYLGEGPRMVRDVFRLAKENSPXXXXXXXXXXXXTKRFDAQTGADREVQ 74
FIRV GSE VQK++GEG RMVR++F +A+E++P + R + +G D EVQ
Sbjct: 206 FIRVSGSELVQKFIGEGARMVRELFVMAREHAPSIIFMDEIDSIGS-RLEGGSGGDSEVQ 264
Query: 75 RILLELLNQMDGFDQTTNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLVFS 134
R +LELLNQ+DGF+ T N+KVIMATNR D LD ALLRPGR+DRKIEFP P+ + +
Sbjct: 265 RTMLELLNQLDGFEATKNIKVIMATNRIDILDSALLRPGRIDRKIEFPPPNEEARLDILK 324
Query: 135 TITAKMNLSDEVDLEDYVARPDRISGADINAICQEVIM 172
+ KMNL+ ++L SGA++ +C E M
Sbjct: 325 IHSRKMNLTRGINLRKIAELMPGASGAEVKGVCTEAGM 362
Score = 233 (87.1 bits), Expect = 2.2e-17, P = 2.2e-17
Identities = 48/102 (47%), Positives = 64/102 (62%)
Query: 223 NLQVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLVFSTITAKMNLSDEVDLEDY 282
N++VIMATNR D LD ALLRPGR+DRKIEFP P+ + + + KMNL+ ++L
Sbjct: 282 NIKVIMATNRIDILDSALLRPGRIDRKIEFPPPNEEARLDILKIHSRKMNLTRGINLRKI 341
Query: 283 VARPDRISGADINAICQEAGMHAVRENRYIVLPKDFEKGYKK 324
SGA++ +C EAGM+A+RE R V +DFE K
Sbjct: 342 AELMPGASGAEVKGVCTEAGMYALRERRVHVTQEDFEMAVAK 383
Score = 142 (55.0 bits), Expect = 5.1e-09, Sum P(2) = 5.1e-09
Identities = 32/59 (54%), Positives = 39/59 (66%)
Query: 169 EVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLVFSTITAKMNFMLNIGNLQVI 227
+VIMATNR D LD ALLRPGR+DRKIEFP P+ + + + KMN I NL+ I
Sbjct: 284 KVIMATNRIDILDSALLRPGRIDRKIEFPPPNEEARLDILKIHSRKMNLTRGI-NLRKI 341
Score = 62 (26.9 bits), Expect = 6.5e-39, Sum P(2) = 6.5e-39
Identities = 15/39 (38%), Positives = 21/39 (53%)
Query: 320 KGYKKCAGMHAVRENRYIVLPKDFEKGYKNNTKKDESEH 358
KG AGM+A+RE R V +DFE +KD ++
Sbjct: 354 KGVCTEAGMYALRERRVHVTQEDFEMAVAKVMQKDSEKN 392
>FB|FBgn0028687 [details] [associations]
symbol:Rpt1 "Regulatory particle triple-A ATPase 1"
species:7227 "Drosophila melanogaster" [GO:0008540 "proteasome
regulatory particle, base subcomplex" evidence=ISS;NAS] [GO:0006508
"proteolysis" evidence=ISS;IDA] [GO:0004175 "endopeptidase
activity" evidence=IDA] [GO:0005838 "proteasome regulatory
particle" evidence=ISS;IDA] [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0009987 "cellular process"
evidence=IMP] [GO:0006974 "response to DNA damage stimulus"
evidence=IMP] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 EMBL:AE013599 GO:GO:0005524 GO:GO:0005737
GO:GO:0006508 GO:GO:0006974 GO:GO:0016887 GO:GO:0004175
GO:GO:0030163 eggNOG:COG1222 TIGRFAMs:TIGR01242 GO:GO:0008540
KO:K03061 OMA:DIRWELI GeneTree:ENSGT00550000074978 HSSP:Q9LCZ4
EMBL:AF145307 EMBL:AY061606 RefSeq:NP_477473.1 UniGene:Dm.3425
SMR:Q7KMQ0 IntAct:Q7KMQ0 STRING:Q7KMQ0 EnsemblMetazoa:FBtr0088947
GeneID:35701 KEGG:dme:Dmel_CG1341 UCSC:CG1341-RA CTD:35701
FlyBase:FBgn0028687 HOGENOM:HOG000237377 InParanoid:Q7KMQ0
OrthoDB:EOG4X3FGQ GenomeRNAi:35701 NextBio:794815 Uniprot:Q7KMQ0
Length = 433
Score = 382 (139.5 bits), Expect = 8.3e-39, Sum P(2) = 8.3e-39
Identities = 84/166 (50%), Positives = 110/166 (66%)
Query: 15 FIRVVGSEFVQKYLGEGPRMVRDVFRLAKENSPXXXXXXXXXXXXTKRFDAQTGADREVQ 74
FIRV+GSE VQKY+GEG RMVR++F +A+ RFD G D EVQ
Sbjct: 237 FIRVIGSELVQKYVGEGARMVRELFEMARSKKACLIFFDEIDAIGGARFDDGAGGDNEVQ 296
Query: 75 RILLELLNQMDGFDQTTNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLVFS 134
R +LEL+NQ+DGFD N+KV+MATNR DTLDPAL+RPGRLDRK+EF LPD+ + +F
Sbjct: 297 RTMLELINQLDGFDPRGNIKVLMATNRPDTLDPALMRPGRLDRKVEFGLPDQDGRSHIFK 356
Query: 135 TITAKMNLSDEVDLE-DYVAR--PDRISGADINAICQEVIMATNRA 177
I A+ ++S E D+ D +AR P+ +GA+I ++C E M RA
Sbjct: 357 -IHAR-SMSVERDIRFDLLARLCPNS-TGAEIRSVCTEAGMFAIRA 399
Score = 244 (91.0 bits), Expect = 6.0e-19, P = 6.0e-19
Identities = 55/112 (49%), Positives = 77/112 (68%)
Query: 222 GNLQVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLVFSTITAKMNLSDEVDLE- 280
GN++V+MATNR DTLDPAL+RPGRLDRK+EF LPD+ + +F I A+ ++S E D+
Sbjct: 313 GNIKVLMATNRPDTLDPALMRPGRLDRKVEFGLPDQDGRSHIFK-IHAR-SMSVERDIRF 370
Query: 281 DYVAR--PDRISGADINAICQEAGMHAVRENRYIVLPKDFEKGYKKCAGMHA 330
D +AR P+ +GA+I ++C EAGM A+R R + KDF + KK +A
Sbjct: 371 DLLARLCPNS-TGAEIRSVCTEAGMFAIRARRKVATEKDFLEAVKKVIKSYA 421
Score = 146 (56.5 bits), Expect = 3.2e-08, Sum P(2) = 3.2e-08
Identities = 28/48 (58%), Positives = 36/48 (75%)
Query: 169 EVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLVFSTITAKMN 216
+V+MATNR DTLDPAL+RPGRLDRK+EF LPD+ + +F M+
Sbjct: 316 KVLMATNRPDTLDPALMRPGRLDRKVEFGLPDQDGRSHIFKIHARSMS 363
Score = 49 (22.3 bits), Expect = 8.3e-39, Sum P(2) = 8.3e-39
Identities = 11/27 (40%), Positives = 14/27 (51%)
Query: 326 AGMHAVRENRYIVLPKDFEKGYKNNTK 352
AGM A+R R + KDF + K K
Sbjct: 392 AGMFAIRARRKVATEKDFLEAVKKVIK 418
>TAIR|locus:2028200 [details] [associations]
symbol:AT1G45000 species:3702 "Arabidopsis thaliana"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=ISM]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0016887 "ATPase
activity" evidence=ISS] [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0005730 "nucleolus" evidence=IDA] [GO:0005618
"cell wall" evidence=IDA] [GO:0005886 "plasma membrane"
evidence=IDA] [GO:0016020 "membrane" evidence=IDA] [GO:0000502
"proteasome complex" evidence=IDA] [GO:0005829 "cytosol"
evidence=RCA] [GO:0009506 "plasmodesma" evidence=IDA] [GO:0030244
"cellulose biosynthetic process" evidence=RCA] [GO:0048193 "Golgi
vesicle transport" evidence=RCA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005886 GO:GO:0009506 GO:GO:0005524
GO:GO:0005737 GO:GO:0005618 GO:GO:0005730 GO:GO:0030163
GO:GO:0000502 HSSP:Q01853 GO:GO:0017111 EMBL:AC007915 KO:K03064
eggNOG:COG1222 TIGRFAMs:TIGR01242 HOGENOM:HOG000225143 OMA:EHKEVES
ProtClustDB:CLSN2679874 EMBL:AY062709 EMBL:AY114673 IPI:IPI00531336
RefSeq:NP_175120.1 UniGene:At.27257 ProteinModelPortal:Q9MAK9
SMR:Q9MAK9 IntAct:Q9MAK9 STRING:Q9MAK9 PaxDb:Q9MAK9 PRIDE:Q9MAK9
EnsemblPlants:AT1G45000.1 GeneID:841065 KEGG:ath:AT1G45000
GeneFarm:2760 TAIR:At1g45000 InParanoid:Q9MAK9 PhylomeDB:Q9MAK9
Uniprot:Q9MAK9
Length = 399
Score = 376 (137.4 bits), Expect = 1.1e-38, Sum P(2) = 1.1e-38
Identities = 77/177 (43%), Positives = 106/177 (59%)
Query: 2 LLCTSFDTELVTAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENSPXXXXXXXXXXXXTK 61
LL + + + F++VV S + KY+GE R++R++F A+E+ P +
Sbjct: 188 LLARAIASNIDANFLKVVSSAIIDKYIGESARLIREMFNYAREHQPCIIFMDEIDAIGGR 247
Query: 62 RFDAQTGADREVQRILLELLNQMDGFDQTTNVKVIMATNRADTLDPALLRPGRLDRKIEF 121
RF T ADRE+QR L+ELLNQ+DGFDQ VK+IMATNR D LDPALLRPGRLDRKIE
Sbjct: 248 RFSEGTSADREIQRTLMELLNQLDGFDQLGKVKMIMATNRPDVLDPALLRPGRLDRKIEI 307
Query: 122 PLPDRRQKRLVFSTITAKMNLSDEVDLEDYVARPDRISGADINAICQEVIMATNRAD 178
PLP+ + + + + + E+D E V + +GAD+ IC E M RA+
Sbjct: 308 PLPNEQSRMEILKIHASGIAKHGEIDYEAIVKLGEGFNGADLRNICTEAGMFAIRAE 364
Score = 240 (89.5 bits), Expect = 1.4e-18, P = 1.4e-18
Identities = 52/125 (41%), Positives = 73/125 (58%)
Query: 200 DRRQKRLVFSTITAKMNFMLNIGNLQVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQ 259
DR +R + + F +G +++IMATNR D LDPALLRPGRLDRKIE PLP+ +
Sbjct: 256 DREIQRTLMELLNQLDGFD-QLGKVKMIMATNRPDVLDPALLRPGRLDRKIEIPLPNEQS 314
Query: 260 KRLVFSTITAKMNLSDEVDLEDYVARPDRISGADINAICQEAGMHAVRENRYIVLPKDFE 319
+ + + + E+D E V + +GAD+ IC EAGM A+R R V+ +DF
Sbjct: 315 RMEILKIHASGIAKHGEIDYEAIVKLGEGFNGADLRNICTEAGMFAIRAERDYVIHEDFM 374
Query: 320 KGYKK 324
K +K
Sbjct: 375 KAVRK 379
Score = 140 (54.3 bits), Expect = 3.5e-08, Sum P(2) = 3.5e-08
Identities = 30/45 (66%), Positives = 34/45 (75%)
Query: 169 EVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLVFSTITA 213
++IMATNR D LDPALLRPGRLDRKIE PLP+ Q R+ I A
Sbjct: 280 KMIMATNRPDVLDPALLRPGRLDRKIEIPLPNE-QSRMEILKIHA 323
Score = 54 (24.1 bits), Expect = 1.1e-38, Sum P(2) = 1.1e-38
Identities = 14/37 (37%), Positives = 20/37 (54%)
Query: 326 AGMHAVRENRYIVLPKDFEKGYK--NNTKKDESEHEF 360
AGM A+R R V+ +DF K + + KK ES +
Sbjct: 356 AGMFAIRAERDYVIHEDFMKAVRKLSEAKKLESSSHY 392
>FB|FBgn0036224 [details] [associations]
symbol:Rpt4R "Regulatory particle triple-A ATPase 4-related"
species:7227 "Drosophila melanogaster" [GO:0005838 "proteasome
regulatory particle" evidence=ISS] [GO:0016887 "ATPase activity"
evidence=ISS] [GO:0030163 "protein catabolic process" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0006974 "response to DNA damage stimulus"
evidence=IMP] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005737 EMBL:AE014296
GO:GO:0006200 GO:GO:0006974 GO:GO:0016887 GO:GO:0030163 HSSP:Q01853
KO:K03064 eggNOG:COG1222 TIGRFAMs:TIGR01242
GeneTree:ENSGT00550000074826 EMBL:AY089267 RefSeq:NP_648525.1
UniGene:Dm.5141 SMR:Q9VTQ9 IntAct:Q9VTQ9 MINT:MINT-869141
STRING:Q9VTQ9 EnsemblMetazoa:FBtr0076040 GeneID:39351
KEGG:dme:Dmel_CG7257 UCSC:CG7257-RA CTD:39351 FlyBase:FBgn0036224
InParanoid:Q9VTQ9 OMA:CAIWTEA OrthoDB:EOG4VT4CM GenomeRNAi:39351
NextBio:813228 Uniprot:Q9VTQ9
Length = 398
Score = 379 (138.5 bits), Expect = 1.3e-38, Sum P(2) = 1.3e-38
Identities = 78/177 (44%), Positives = 105/177 (59%)
Query: 2 LLCTSFDTELVTAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENSPXXXXXXXXXXXXTK 61
LL + +++ F++VV S V KY+GE R++R++F A+++ P +
Sbjct: 191 LLARAIASQMDANFLKVVSSAIVDKYIGESARLIREMFAYARDHQPCIIFMDEIDAIGGR 250
Query: 62 RFDAQTGADREVQRILLELLNQMDGFDQTTNVKVIMATNRADTLDPALLRPGRLDRKIEF 121
RF T ADRE+QR L+ELLNQMDGFD VK+IMATNR DTLDPALLRPGRLDRK+E
Sbjct: 251 RFSEGTSADREIQRTLMELLNQMDGFDALGQVKMIMATNRPDTLDPALLRPGRLDRKLEI 310
Query: 122 PLPDRRQKRLVFSTITAKMNLSDEVDLEDYVARPDRISGADINAICQEVIMATNRAD 178
PLP+ + + +N E+D E V D +GAD+ IC E + R D
Sbjct: 311 PLPNEVARMDILKIHAEPLNKRGEIDYEAVVKLSDLFNGADLRNICTEAGLFALRCD 367
Score = 250 (93.1 bits), Expect = 4.6e-20, P = 4.6e-20
Identities = 54/127 (42%), Positives = 77/127 (60%)
Query: 200 DRRQKRLVFSTITAKMNFMLNIGNLQVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQ 259
DR +R + + +M+ +G +++IMATNR DTLDPALLRPGRLDRK+E PLP+
Sbjct: 259 DREIQRTLMELLN-QMDGFDALGQVKMIMATNRPDTLDPALLRPGRLDRKLEIPLPNEVA 317
Query: 260 KRLVFSTITAKMNLSDEVDLEDYVARPDRISGADINAICQEAGMHAVRENRYIVLPKDFE 319
+ + +N E+D E V D +GAD+ IC EAG+ A+R +R V+ +DF
Sbjct: 318 RMDILKIHAEPLNKRGEIDYEAVVKLSDLFNGADLRNICTEAGLFALRCDREFVIQEDFM 377
Query: 320 KGYKKCA 326
K +K A
Sbjct: 378 KAVRKIA 384
Score = 140 (54.3 bits), Expect = 9.0e-08, Sum P(2) = 9.0e-08
Identities = 30/46 (65%), Positives = 38/46 (82%)
Query: 156 DRISGADINAICQ-EVIMATNRADTLDPALLRPGRLDRKIEFPLPD 200
+++ G D A+ Q ++IMATNR DTLDPALLRPGRLDRK+E PLP+
Sbjct: 271 NQMDGFD--ALGQVKMIMATNRPDTLDPALLRPGRLDRKLEIPLPN 314
Score = 50 (22.7 bits), Expect = 1.3e-38, Sum P(2) = 1.3e-38
Identities = 13/37 (35%), Positives = 22/37 (59%)
Query: 326 AGMHAVRENRYIVLPKDFEKGYKN--NTKKDESEHEF 360
AG+ A+R +R V+ +DF K + + KK ES ++
Sbjct: 359 AGLFALRCDREFVIQEDFMKAVRKIADNKKLESRLDY 395
>TAIR|locus:2036099 [details] [associations]
symbol:RPT5B "26S proteasome AAA-ATPase subunit RPT5B"
species:3702 "Arabidopsis thaliana" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISM] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0016887 "ATPase activity" evidence=ISS] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0005516 "calmodulin
binding" evidence=ISS] [GO:0010255 "glucose mediated signaling
pathway" evidence=IMP] [GO:0005886 "plasma membrane" evidence=IDA]
[GO:0016020 "membrane" evidence=IDA] [GO:0009553 "embryo sac
development" evidence=IGI] [GO:0009555 "pollen development"
evidence=IGI] [GO:0010498 "proteasomal protein catabolic process"
evidence=IGI;RCA] [GO:0000502 "proteasome complex" evidence=IDA]
[GO:0006094 "gluconeogenesis" evidence=RCA] [GO:0006635 "fatty acid
beta-oxidation" evidence=RCA] [GO:0007010 "cytoskeleton
organization" evidence=RCA] [GO:0009407 "toxin catabolic process"
evidence=RCA] [GO:0043161 "proteasomal ubiquitin-dependent protein
catabolic process" evidence=RCA] [GO:0043248 "proteasome assembly"
evidence=RCA] [GO:0051788 "response to misfolded protein"
evidence=RCA] [GO:0080129 "proteasome core complex assembly"
evidence=RCA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005886
GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0009555
GO:GO:0000502 GO:GO:0017111 GO:GO:0009553 EMBL:AC000106
GO:GO:0010498 GO:GO:0010255 eggNOG:COG1222 TIGRFAMs:TIGR01242
KO:K03065 HOGENOM:HOG000225143 ProtClustDB:CLSN2679225
EMBL:EU980096 EMBL:AY050423 EMBL:AF412095 EMBL:AY124813
IPI:IPI00549144 PIR:C86223 RefSeq:NP_172384.1 UniGene:At.10379
UniGene:At.42241 ProteinModelPortal:O04019 SMR:O04019 IntAct:O04019
STRING:O04019 PaxDb:O04019 PRIDE:O04019 EnsemblPlants:AT1G09100.1
GeneID:837431 KEGG:ath:AT1G09100 GeneFarm:1498 TAIR:At1g09100
InParanoid:O04019 OMA:VEILEMS PhylomeDB:O04019
Genevestigator:O04019 Uniprot:O04019
Length = 423
Score = 388 (141.6 bits), Expect = 1.7e-38, Sum P(2) = 1.7e-38
Identities = 76/167 (45%), Positives = 103/167 (61%)
Query: 15 FIRVVGSEFVQKYLGEGPRMVRDVFRLAKENSPXXXXXXXXXXXXTKRFDAQTGADREVQ 74
F+++ G + VQ ++G+G ++VRD F LAKE SP TKRFD++ DREVQ
Sbjct: 232 FLKLAGPQLVQMFIGDGAKLVRDAFLLAKEKSPCIIFIDEIDAIGTKRFDSEVSGDREVQ 291
Query: 75 RILLELLNQMDGFDQTTNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLVFS 134
R +LELLNQ+DGF +KVI ATNRAD LDPAL+R GRLDRKIEFP P + +
Sbjct: 292 RTMLELLNQLDGFSSDDRIKVIAATNRADILDPALMRSGRLDRKIEFPHPTEEARGRILQ 351
Query: 135 TITAKMNLSDEVDLEDYVARPDRISGADINAICQEVIMATNRADTLD 181
+ KMN++ +V+ E+ D +GA + A+C E M R D +
Sbjct: 352 IHSRKMNVNADVNFEELARSTDDFNGAQLKAVCVEAGMLALRRDATE 398
Score = 224 (83.9 bits), Expect = 2.2e-16, P = 2.2e-16
Identities = 49/122 (40%), Positives = 71/122 (58%)
Query: 200 DRRQKRLVFSTITAKMNFMLNIGNLQVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQ 259
DR +R + + F + ++VI ATNRAD LDPAL+R GRLDRKIEFP P
Sbjct: 287 DREVQRTMLELLNQLDGFSSD-DRIKVIAATNRADILDPALMRSGRLDRKIEFPHPTEEA 345
Query: 260 KRLVFSTITAKMNLSDEVDLEDYVARPDRISGADINAICQEAGMHAVRENRYIVLPKDFE 319
+ + + KMN++ +V+ E+ D +GA + A+C EAGM A+R + V +DF
Sbjct: 346 RGRILQIHSRKMNVNADVNFEELARSTDDFNGAQLKAVCVEAGMLALRRDATEVNHEDFN 405
Query: 320 KG 321
+G
Sbjct: 406 EG 407
Score = 138 (53.6 bits), Expect = 2.0e-06, Sum P(2) = 2.0e-06
Identities = 29/63 (46%), Positives = 40/63 (63%)
Query: 169 EVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLVFSTITAKMNFMLNIGNLQVIM 228
+VI ATNRAD LDPAL+R GRLDRKIEFP P + + + KMN ++ ++
Sbjct: 311 KVIAATNRADILDPALMRSGRLDRKIEFPHPTEEARGRILQIHSRKMNVNADVNFEELAR 370
Query: 229 ATN 231
+T+
Sbjct: 371 STD 373
Score = 40 (19.1 bits), Expect = 1.7e-38, Sum P(2) = 1.7e-38
Identities = 11/36 (30%), Positives = 18/36 (50%)
Query: 326 AGMHAVRENRYIVLPKDFEKGYKNNTKKDESEHEFY 361
AGM A+R + V +DF +G K ++ +Y
Sbjct: 387 AGMLALRRDATEVNHEDFNEGIIQVQAKKKASLNYY 422
>TAIR|locus:2079742 [details] [associations]
symbol:RPT5A "regulatory particle triple-A ATPase 5A"
species:3702 "Arabidopsis thaliana" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISM;IDA;TAS] [GO:0005737 "cytoplasm"
evidence=IEA;IDA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0016887 "ATPase activity" evidence=IGI;ISS] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=RCA;TAS]
[GO:0005516 "calmodulin binding" evidence=TAS] [GO:0009553 "embryo
sac development" evidence=IGI] [GO:0009555 "pollen development"
evidence=IGI] [GO:0010498 "proteasomal protein catabolic process"
evidence=IGI;RCA] [GO:0000502 "proteasome complex" evidence=IDA]
[GO:0005829 "cytosol" evidence=IDA] [GO:0000741 "karyogamy"
evidence=RCA] [GO:0006094 "gluconeogenesis" evidence=RCA]
[GO:0006635 "fatty acid beta-oxidation" evidence=RCA] [GO:0007010
"cytoskeleton organization" evidence=RCA] [GO:0009407 "toxin
catabolic process" evidence=RCA] [GO:0009560 "embryo sac egg cell
differentiation" evidence=RCA] [GO:0009630 "gravitropism"
evidence=RCA] [GO:0043161 "proteasomal ubiquitin-dependent protein
catabolic process" evidence=RCA] [GO:0043248 "proteasome assembly"
evidence=RCA] [GO:0051788 "response to misfolded protein"
evidence=RCA] [GO:0080129 "proteasome core complex assembly"
evidence=RCA] [GO:0008540 "proteasome regulatory particle, base
subcomplex" evidence=IDA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005829 GO:GO:0005524 GO:GO:0005634
EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0009555 GO:GO:0000502
GO:GO:0017111 GO:GO:0009553 GO:GO:0010498 EMBL:AC009606
eggNOG:COG1222 TIGRFAMs:TIGR01242 KO:K03065 HOGENOM:HOG000225143
OMA:GALMYGP EMBL:AF081573 EMBL:AF123394 EMBL:AY062705 EMBL:BT000140
IPI:IPI00517001 RefSeq:NP_187204.1 UniGene:At.11513 HSSP:Q9LCZ4
ProteinModelPortal:Q9SEI2 SMR:Q9SEI2 IntAct:Q9SEI2 STRING:Q9SEI2
PaxDb:Q9SEI2 PRIDE:Q9SEI2 EnsemblPlants:AT3G05530.1 GeneID:819718
KEGG:ath:AT3G05530 GeneFarm:2742 TAIR:At3g05530 InParanoid:Q9SEI2
PhylomeDB:Q9SEI2 ProtClustDB:CLSN2679225 Uniprot:Q9SEI2
Length = 424
Score = 388 (141.6 bits), Expect = 1.7e-38, Sum P(2) = 1.7e-38
Identities = 75/167 (44%), Positives = 103/167 (61%)
Query: 15 FIRVVGSEFVQKYLGEGPRMVRDVFRLAKENSPXXXXXXXXXXXXTKRFDAQTGADREVQ 74
F+++ G + VQ ++G+G ++VRD F+LAKE +P TKRFD++ DREVQ
Sbjct: 233 FLKLAGPQLVQMFIGDGAKLVRDAFQLAKEKAPCIIFIDEIDAIGTKRFDSEVSGDREVQ 292
Query: 75 RILLELLNQMDGFDQTTNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLVFS 134
R +LELLNQ+DGF +KVI ATNRAD LDPAL+R GRLDRKIEFP P + +
Sbjct: 293 RTMLELLNQLDGFSSDERIKVIAATNRADILDPALMRSGRLDRKIEFPHPTEEARARILQ 352
Query: 135 TITAKMNLSDEVDLEDYVARPDRISGADINAICQEVIMATNRADTLD 181
+ KMN+ +V+ E+ D +GA + A+C E M R D +
Sbjct: 353 IHSRKMNVHPDVNFEELARSTDDFNGAQLKAVCVEAGMLALRRDATE 399
Score = 223 (83.6 bits), Expect = 2.9e-16, P = 2.9e-16
Identities = 49/122 (40%), Positives = 70/122 (57%)
Query: 200 DRRQKRLVFSTITAKMNFMLNIGNLQVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQ 259
DR +R + + F + ++VI ATNRAD LDPAL+R GRLDRKIEFP P
Sbjct: 288 DREVQRTMLELLNQLDGFSSD-ERIKVIAATNRADILDPALMRSGRLDRKIEFPHPTEEA 346
Query: 260 KRLVFSTITAKMNLSDEVDLEDYVARPDRISGADINAICQEAGMHAVRENRYIVLPKDFE 319
+ + + KMN+ +V+ E+ D +GA + A+C EAGM A+R + V +DF
Sbjct: 347 RARILQIHSRKMNVHPDVNFEELARSTDDFNGAQLKAVCVEAGMLALRRDATEVNHEDFN 406
Query: 320 KG 321
+G
Sbjct: 407 EG 408
Score = 137 (53.3 bits), Expect = 2.6e-06, Sum P(2) = 2.6e-06
Identities = 28/48 (58%), Positives = 33/48 (68%)
Query: 169 EVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLVFSTITAKMN 216
+VI ATNRAD LDPAL+R GRLDRKIEFP P + + + KMN
Sbjct: 312 KVIAATNRADILDPALMRSGRLDRKIEFPHPTEEARARILQIHSRKMN 359
Score = 40 (19.1 bits), Expect = 1.7e-38, Sum P(2) = 1.7e-38
Identities = 11/36 (30%), Positives = 18/36 (50%)
Query: 326 AGMHAVRENRYIVLPKDFEKGYKNNTKKDESEHEFY 361
AGM A+R + V +DF +G K ++ +Y
Sbjct: 388 AGMLALRRDATEVNHEDFNEGIIQVQAKKKASLNYY 423
>TAIR|locus:2159996 [details] [associations]
symbol:RPT4A "regulatory particle triple-A ATPase 4A"
species:3702 "Arabidopsis thaliana" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISM;TAS] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0016887 "ATPase activity" evidence=IGI;ISS] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=TAS]
[GO:0005618 "cell wall" evidence=IDA] [GO:0000502 "proteasome
complex" evidence=IDA] [GO:0005829 "cytosol" evidence=IDA]
[GO:0043161 "proteasomal ubiquitin-dependent protein catabolic
process" evidence=RCA] [GO:0043248 "proteasome assembly"
evidence=RCA] [GO:0051788 "response to misfolded protein"
evidence=RCA] [GO:0008540 "proteasome regulatory particle, base
subcomplex" evidence=IDA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005829 GO:GO:0005524 GO:GO:0005634
EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0005618 GO:GO:0030163
GO:GO:0000502 HSSP:Q01853 GO:GO:0017111 EMBL:AB008264 KO:K03064
eggNOG:COG1222 TIGRFAMs:TIGR01242 HOGENOM:HOG000225143
EMBL:AF123393 EMBL:AF372945 EMBL:AY078040 EMBL:AK220732
IPI:IPI00547512 RefSeq:NP_199115.1 UniGene:At.6532
ProteinModelPortal:Q9SEI3 SMR:Q9SEI3 IntAct:Q9SEI3 STRING:Q9SEI3
PaxDb:Q9SEI3 PRIDE:Q9SEI3 EnsemblPlants:AT5G43010.1 GeneID:834316
KEGG:ath:AT5G43010 GeneFarm:2749 TAIR:At5g43010 InParanoid:Q9SEI3
OMA:NAPFDPE PhylomeDB:Q9SEI3 ProtClustDB:CLSN2679874 Uniprot:Q9SEI3
Length = 399
Score = 374 (136.7 bits), Expect = 1.7e-38, Sum P(2) = 1.7e-38
Identities = 77/177 (43%), Positives = 105/177 (59%)
Query: 2 LLCTSFDTELVTAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENSPXXXXXXXXXXXXTK 61
LL + + + F++VV S + KY+GE R++R++F A+E+ P +
Sbjct: 188 LLARAIASNIDANFLKVVSSAIIDKYIGESARLIREMFNYAREHQPCIIFMDEIDAIGGR 247
Query: 62 RFDAQTGADREVQRILLELLNQMDGFDQTTNVKVIMATNRADTLDPALLRPGRLDRKIEF 121
RF T ADRE+QR L+ELLNQ+DGFD VK+IMATNR D LDPALLRPGRLDRKIE
Sbjct: 248 RFSEGTSADREIQRTLMELLNQLDGFDNLGKVKMIMATNRPDVLDPALLRPGRLDRKIEI 307
Query: 122 PLPDRRQKRLVFSTITAKMNLSDEVDLEDYVARPDRISGADINAICQEVIMATNRAD 178
PLP+ + + + A + E+D E V + +GAD+ IC E M RA+
Sbjct: 308 PLPNEQSRMDILKIHAAGIAKHGEIDYEAIVKLAEGFNGADLRNICTEAGMFAIRAE 364
Score = 249 (92.7 bits), Expect = 6.7e-20, P = 6.7e-20
Identities = 54/125 (43%), Positives = 74/125 (59%)
Query: 200 DRRQKRLVFSTITAKMNFMLNIGNLQVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQ 259
DR +R + + F N+G +++IMATNR D LDPALLRPGRLDRKIE PLP+ +
Sbjct: 256 DREIQRTLMELLNQLDGFD-NLGKVKMIMATNRPDVLDPALLRPGRLDRKIEIPLPNEQS 314
Query: 260 KRLVFSTITAKMNLSDEVDLEDYVARPDRISGADINAICQEAGMHAVRENRYIVLPKDFE 319
+ + A + E+D E V + +GAD+ IC EAGM A+R R V+ +DF
Sbjct: 315 RMDILKIHAAGIAKHGEIDYEAIVKLAEGFNGADLRNICTEAGMFAIRAERDYVIHEDFM 374
Query: 320 KGYKK 324
K +K
Sbjct: 375 KAVRK 379
Score = 140 (54.3 bits), Expect = 3.5e-08, Sum P(2) = 3.5e-08
Identities = 29/49 (59%), Positives = 37/49 (75%)
Query: 156 DRISGADINAICQEVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQK 204
+++ G D N ++IMATNR D LDPALLRPGRLDRKIE PLP+ + +
Sbjct: 268 NQLDGFD-NLGKVKMIMATNRPDVLDPALLRPGRLDRKIEIPLPNEQSR 315
Score = 54 (24.1 bits), Expect = 1.7e-38, Sum P(2) = 1.7e-38
Identities = 14/37 (37%), Positives = 20/37 (54%)
Query: 326 AGMHAVRENRYIVLPKDFEKGYK--NNTKKDESEHEF 360
AGM A+R R V+ +DF K + + KK ES +
Sbjct: 356 AGMFAIRAERDYVIHEDFMKAVRKLSEAKKLESSSHY 392
>GENEDB_PFALCIPARUM|PF11_0314 [details] [associations]
symbol:PF11_0314 "26S protease subunit
regulatory subunit 6a, putative" species:5833 "Plasmodium
falciparum" [GO:0004175 "endopeptidase activity" evidence=ISS]
[GO:0006508 "proteolysis" evidence=ISS] [GO:0016887 "ATPase
activity" evidence=ISS] [GO:0000502 "proteasome complex"
evidence=ISS] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005737 GO:GO:0006508
GO:GO:0016887 GO:GO:0004175 GO:GO:0030163 GO:GO:0000502 HSSP:Q01853
EMBL:AE014186 TIGRFAMs:TIGR01242 KO:K03065 HOGENOM:HOG000225143
OMA:GALMYGP ProtClustDB:CLSZ2433711 RefSeq:XP_001347985.1
ProteinModelPortal:Q8II60 IntAct:Q8II60 MINT:MINT-1730387
PRIDE:Q8II60 EnsemblProtists:PF11_0314:mRNA GeneID:810861
KEGG:pfa:PF11_0314 EuPathDB:PlasmoDB:PF3D7_1130400 Uniprot:Q8II60
Length = 439
Score = 390 (142.3 bits), Expect = 2.2e-38, Sum P(2) = 2.2e-38
Identities = 79/179 (44%), Positives = 108/179 (60%)
Query: 2 LLCTSFDTELVTAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENSPXXXXXXXXXXXXTK 61
LL + ++ F+++ G + VQ ++G+G +MVRD F LAKE +P TK
Sbjct: 235 LLARACASQTNATFLKLAGPQLVQMFIGDGAKMVRDAFNLAKEKAPAIIFIDELDAIGTK 294
Query: 62 RFDAQTGADREVQRILLELLNQMDGFDQTTNVKVIMATNRADTLDPALLRPGRLDRKIEF 121
RFD++ DREVQR +LELLNQ+DGF VKVI ATNR DTLDPALLR GRLDRKIE
Sbjct: 295 RFDSELSGDREVQRTMLELLNQLDGFSTDDTVKVIAATNRPDTLDPALLRSGRLDRKIEL 354
Query: 122 PLPDRRQKRLVFSTITAKMNLSDEVDLEDYVARPDRISGADINAICQEV-IMATNRADT 179
P P+ + + + KMN+ +V+ E+ D +GA + A+C E ++A R T
Sbjct: 355 PHPNEESRARILQIHSRKMNVHKDVNFEELARSTDDFNGAQLKAVCVEAGMIALRRGAT 413
Score = 223 (83.6 bits), Expect = 3.3e-16, P = 3.3e-16
Identities = 56/154 (36%), Positives = 82/154 (53%)
Query: 173 ATNRADTLDPALLRPGRLD----RKIEFPLP-DRRQKRLVFSTITAKMNFMLNIGNLQVI 227
A N A PA++ LD ++ + L DR +R + + F + ++VI
Sbjct: 271 AFNLAKEKAPAIIFIDELDAIGTKRFDSELSGDREVQRTMLELLNQLDGFSTD-DTVKVI 329
Query: 228 MATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLVFSTITAKMNLSDEVDLEDYVARPD 287
ATNR DTLDPALLR GRLDRKIE P P+ + + + KMN+ +V+ E+ D
Sbjct: 330 AATNRPDTLDPALLRSGRLDRKIELPHPNEESRARILQIHSRKMNVHKDVNFEELARSTD 389
Query: 288 RISGADINAICQEAGMHAVRENRYIVLPKDFEKG 321
+GA + A+C EAGM A+R + +DF +G
Sbjct: 390 DFNGAQLKAVCVEAGMIALRRGATEIDHEDFVEG 423
Score = 138 (53.6 bits), Expect = 4.6e-06, Sum P(2) = 4.6e-06
Identities = 29/63 (46%), Positives = 40/63 (63%)
Query: 169 EVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLVFSTITAKMNFMLNIGNLQVIM 228
+VI ATNR DTLDPALLR GRLDRKIE P P+ + + + KMN ++ ++
Sbjct: 327 KVIAATNRPDTLDPALLRSGRLDRKIELPHPNEESRARILQIHSRKMNVHKDVNFEELAR 386
Query: 229 ATN 231
+T+
Sbjct: 387 STD 389
Score = 37 (18.1 bits), Expect = 2.2e-38, Sum P(2) = 2.2e-38
Identities = 10/36 (27%), Positives = 18/36 (50%)
Query: 326 AGMHAVRENRYIVLPKDFEKGYKNNTKKDESEHEFY 361
AGM A+R + +DF +G + K +S ++
Sbjct: 403 AGMIALRRGATEIDHEDFVEGITSVLSKKKSTLNYF 438
>UNIPROTKB|Q8II60 [details] [associations]
symbol:PF11_0314 "26S protease subunit regulatory subunit
6a, putative" species:36329 "Plasmodium falciparum 3D7" [GO:0000502
"proteasome complex" evidence=ISS] [GO:0004175 "endopeptidase
activity" evidence=ISS] [GO:0006200 "ATP catabolic process"
evidence=ISS] [GO:0006508 "proteolysis" evidence=ISS] [GO:0016887
"ATPase activity" evidence=ISS] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GO:GO:0005737 GO:GO:0006508 GO:GO:0016887 GO:GO:0004175
GO:GO:0030163 GO:GO:0000502 HSSP:Q01853 EMBL:AE014186
TIGRFAMs:TIGR01242 KO:K03065 HOGENOM:HOG000225143 OMA:GALMYGP
ProtClustDB:CLSZ2433711 RefSeq:XP_001347985.1
ProteinModelPortal:Q8II60 IntAct:Q8II60 MINT:MINT-1730387
PRIDE:Q8II60 EnsemblProtists:PF11_0314:mRNA GeneID:810861
KEGG:pfa:PF11_0314 EuPathDB:PlasmoDB:PF3D7_1130400 Uniprot:Q8II60
Length = 439
Score = 390 (142.3 bits), Expect = 2.2e-38, Sum P(2) = 2.2e-38
Identities = 79/179 (44%), Positives = 108/179 (60%)
Query: 2 LLCTSFDTELVTAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENSPXXXXXXXXXXXXTK 61
LL + ++ F+++ G + VQ ++G+G +MVRD F LAKE +P TK
Sbjct: 235 LLARACASQTNATFLKLAGPQLVQMFIGDGAKMVRDAFNLAKEKAPAIIFIDELDAIGTK 294
Query: 62 RFDAQTGADREVQRILLELLNQMDGFDQTTNVKVIMATNRADTLDPALLRPGRLDRKIEF 121
RFD++ DREVQR +LELLNQ+DGF VKVI ATNR DTLDPALLR GRLDRKIE
Sbjct: 295 RFDSELSGDREVQRTMLELLNQLDGFSTDDTVKVIAATNRPDTLDPALLRSGRLDRKIEL 354
Query: 122 PLPDRRQKRLVFSTITAKMNLSDEVDLEDYVARPDRISGADINAICQEV-IMATNRADT 179
P P+ + + + KMN+ +V+ E+ D +GA + A+C E ++A R T
Sbjct: 355 PHPNEESRARILQIHSRKMNVHKDVNFEELARSTDDFNGAQLKAVCVEAGMIALRRGAT 413
Score = 223 (83.6 bits), Expect = 3.3e-16, P = 3.3e-16
Identities = 56/154 (36%), Positives = 82/154 (53%)
Query: 173 ATNRADTLDPALLRPGRLD----RKIEFPLP-DRRQKRLVFSTITAKMNFMLNIGNLQVI 227
A N A PA++ LD ++ + L DR +R + + F + ++VI
Sbjct: 271 AFNLAKEKAPAIIFIDELDAIGTKRFDSELSGDREVQRTMLELLNQLDGFSTD-DTVKVI 329
Query: 228 MATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLVFSTITAKMNLSDEVDLEDYVARPD 287
ATNR DTLDPALLR GRLDRKIE P P+ + + + KMN+ +V+ E+ D
Sbjct: 330 AATNRPDTLDPALLRSGRLDRKIELPHPNEESRARILQIHSRKMNVHKDVNFEELARSTD 389
Query: 288 RISGADINAICQEAGMHAVRENRYIVLPKDFEKG 321
+GA + A+C EAGM A+R + +DF +G
Sbjct: 390 DFNGAQLKAVCVEAGMIALRRGATEIDHEDFVEG 423
Score = 138 (53.6 bits), Expect = 4.6e-06, Sum P(2) = 4.6e-06
Identities = 29/63 (46%), Positives = 40/63 (63%)
Query: 169 EVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLVFSTITAKMNFMLNIGNLQVIM 228
+VI ATNR DTLDPALLR GRLDRKIE P P+ + + + KMN ++ ++
Sbjct: 327 KVIAATNRPDTLDPALLRSGRLDRKIELPHPNEESRARILQIHSRKMNVHKDVNFEELAR 386
Query: 229 ATN 231
+T+
Sbjct: 387 STD 389
Score = 37 (18.1 bits), Expect = 2.2e-38, Sum P(2) = 2.2e-38
Identities = 10/36 (27%), Positives = 18/36 (50%)
Query: 326 AGMHAVRENRYIVLPKDFEKGYKNNTKKDESEHEFY 361
AGM A+R + +DF +G + K +S ++
Sbjct: 403 AGMIALRRGATEIDHEDFVEGITSVLSKKKSTLNYF 438
>UNIPROTKB|E1C4V5 [details] [associations]
symbol:PSMC2 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0005737 "cytoplasm" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005737 GO:GO:0030163
GO:GO:0017111 TIGRFAMs:TIGR01242 GeneTree:ENSGT00550000074978
EMBL:AADN02036894 EMBL:AADN02036895 IPI:IPI00602342
Ensembl:ENSGALT00000013403 ArrayExpress:E1C4V5 Uniprot:E1C4V5
Length = 424
Score = 380 (138.8 bits), Expect = 2.2e-38, Sum P(2) = 2.2e-38
Identities = 81/165 (49%), Positives = 105/165 (63%)
Query: 15 FIRVVGSEFVQKYLGEGPRMVRDVFRLAKENSPXXXXXXXXXXXXTKRFDAQTGADREVQ 74
FIRV+GSE VQKY+GEG RMVR++F +A+ RFD G D EVQ
Sbjct: 228 FIRVIGSELVQKYVGEGARMVRELFEMARTKKACLIFFDEIDAIGGARFDDGAGGDNEVQ 287
Query: 75 RILLELLNQMDGFDQTTNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLVFS 134
R +LEL+NQ+DGFD N+KV+MATNR DTLDPAL+RPGRLDRKIEF LPD + +F
Sbjct: 288 RTMLELINQLDGFDPRGNIKVLMATNRPDTLDPALMRPGRLDRKIEFSLPDLEGRTHIFK 347
Query: 135 TITAKMNLSDEVDLEDYVAR--PDRISGADINAICQEVIMATNRA 177
M++ ++ E +AR P+ +GA+I ++C E M RA
Sbjct: 348 IHARSMSVERDIRFE-LLARLCPNS-TGAEIRSVCTEAGMFAIRA 390
Score = 239 (89.2 bits), Expect = 2.7e-18, P = 2.7e-18
Identities = 52/111 (46%), Positives = 71/111 (63%)
Query: 222 GNLQVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLVFSTITAKMNLSDEVDLED 281
GN++V+MATNR DTLDPAL+RPGRLDRKIEF LPD + +F M++ ++ E
Sbjct: 304 GNIKVLMATNRPDTLDPALMRPGRLDRKIEFSLPDLEGRTHIFKIHARSMSVERDIRFE- 362
Query: 282 YVAR--PDRISGADINAICQEAGMHAVRENRYIVLPKDFEKGYKKCAGMHA 330
+AR P+ +GA+I ++C EAGM A+R R I KDF + K +A
Sbjct: 363 LLARLCPNS-TGAEIRSVCTEAGMFAIRARRKIATEKDFLEAVNKVIKSYA 412
Score = 147 (56.8 bits), Expect = 3.5e-08, Sum P(2) = 3.5e-08
Identities = 29/48 (60%), Positives = 35/48 (72%)
Query: 169 EVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLVFSTITAKMN 216
+V+MATNR DTLDPAL+RPGRLDRKIEF LPD + +F M+
Sbjct: 307 KVLMATNRPDTLDPALMRPGRLDRKIEFSLPDLEGRTHIFKIHARSMS 354
Score = 47 (21.6 bits), Expect = 2.2e-38, Sum P(2) = 2.2e-38
Identities = 10/18 (55%), Positives = 11/18 (61%)
Query: 326 AGMHAVRENRYIVLPKDF 343
AGM A+R R I KDF
Sbjct: 383 AGMFAIRARRKIATEKDF 400
>UNIPROTKB|F1NFL8 [details] [associations]
symbol:PSMC2 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0005739 "mitochondrion" evidence=IEA]
[GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=IEA] [GO:0016887 "ATPase activity" evidence=IEA]
[GO:0022624 "proteasome accessory complex" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005739 GO:GO:0005524 GO:GO:0005634 GO:GO:0016887
GO:GO:0000502 GO:GO:0006511 TIGRFAMs:TIGR01242 OMA:DIRWELI
GeneTree:ENSGT00550000074978 EMBL:AADN02036894 EMBL:AADN02036895
IPI:IPI00821647 Ensembl:ENSGALT00000039595 ArrayExpress:F1NFL8
Uniprot:F1NFL8
Length = 432
Score = 380 (138.8 bits), Expect = 2.2e-38, Sum P(2) = 2.2e-38
Identities = 81/165 (49%), Positives = 105/165 (63%)
Query: 15 FIRVVGSEFVQKYLGEGPRMVRDVFRLAKENSPXXXXXXXXXXXXTKRFDAQTGADREVQ 74
FIRV+GSE VQKY+GEG RMVR++F +A+ RFD G D EVQ
Sbjct: 236 FIRVIGSELVQKYVGEGARMVRELFEMARTKKACLIFFDEIDAIGGARFDDGAGGDNEVQ 295
Query: 75 RILLELLNQMDGFDQTTNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLVFS 134
R +LEL+NQ+DGFD N+KV+MATNR DTLDPAL+RPGRLDRKIEF LPD + +F
Sbjct: 296 RTMLELINQLDGFDPRGNIKVLMATNRPDTLDPALMRPGRLDRKIEFSLPDLEGRTHIFK 355
Query: 135 TITAKMNLSDEVDLEDYVAR--PDRISGADINAICQEVIMATNRA 177
M++ ++ E +AR P+ +GA+I ++C E M RA
Sbjct: 356 IHARSMSVERDIRFE-LLARLCPNS-TGAEIRSVCTEAGMFAIRA 398
Score = 239 (89.2 bits), Expect = 2.9e-18, P = 2.9e-18
Identities = 52/111 (46%), Positives = 71/111 (63%)
Query: 222 GNLQVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLVFSTITAKMNLSDEVDLED 281
GN++V+MATNR DTLDPAL+RPGRLDRKIEF LPD + +F M++ ++ E
Sbjct: 312 GNIKVLMATNRPDTLDPALMRPGRLDRKIEFSLPDLEGRTHIFKIHARSMSVERDIRFE- 370
Query: 282 YVAR--PDRISGADINAICQEAGMHAVRENRYIVLPKDFEKGYKKCAGMHA 330
+AR P+ +GA+I ++C EAGM A+R R I KDF + K +A
Sbjct: 371 LLARLCPNS-TGAEIRSVCTEAGMFAIRARRKIATEKDFLEAVNKVIKSYA 420
Score = 147 (56.8 bits), Expect = 3.8e-08, Sum P(2) = 3.8e-08
Identities = 29/48 (60%), Positives = 35/48 (72%)
Query: 169 EVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLVFSTITAKMN 216
+V+MATNR DTLDPAL+RPGRLDRKIEF LPD + +F M+
Sbjct: 315 KVLMATNRPDTLDPALMRPGRLDRKIEFSLPDLEGRTHIFKIHARSMS 362
Score = 47 (21.6 bits), Expect = 2.2e-38, Sum P(2) = 2.2e-38
Identities = 10/18 (55%), Positives = 11/18 (61%)
Query: 326 AGMHAVRENRYIVLPKDF 343
AGM A+R R I KDF
Sbjct: 391 AGMFAIRARRKIATEKDF 408
>UNIPROTKB|Q5E9F9 [details] [associations]
symbol:PSMC2 "26S protease regulatory subunit 7"
species:9913 "Bos taurus" [GO:0000932 "cytoplasmic mRNA processing
body" evidence=ISS] [GO:0022624 "proteasome accessory complex"
evidence=ISS] [GO:0016887 "ATPase activity" evidence=ISS]
[GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=ISS] [GO:0000502 "proteasome complex" evidence=ISS]
[GO:0005634 "nucleus" evidence=IEA] [GO:0005739 "mitochondrion"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005739 GO:GO:0005524 GO:GO:0005634 GO:GO:0016887
GO:GO:0006511 HSSP:Q9WZ49 GO:GO:0000932 TIGRFAMs:TIGR01242
HOVERGEN:HBG000109 GO:GO:0022624 KO:K03061 OMA:DIRWELI
EMBL:BT020961 EMBL:BC102391 IPI:IPI00693210 RefSeq:NP_001015639.1
UniGene:Bt.24017 ProteinModelPortal:Q5E9F9 SMR:Q5E9F9 PRIDE:Q5E9F9
Ensembl:ENSBTAT00000065774 GeneID:530186 KEGG:bta:530186 CTD:5701
GeneTree:ENSGT00550000074978 OrthoDB:EOG4RXZ05 NextBio:20875201
Uniprot:Q5E9F9
Length = 433
Score = 380 (138.8 bits), Expect = 2.2e-38, Sum P(2) = 2.2e-38
Identities = 81/165 (49%), Positives = 105/165 (63%)
Query: 15 FIRVVGSEFVQKYLGEGPRMVRDVFRLAKENSPXXXXXXXXXXXXTKRFDAQTGADREVQ 74
FIRV+GSE VQKY+GEG RMVR++F +A+ RFD G D EVQ
Sbjct: 237 FIRVIGSELVQKYVGEGARMVRELFEMARTKKACLIFFDEIDAIGGARFDDGAGGDNEVQ 296
Query: 75 RILLELLNQMDGFDQTTNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLVFS 134
R +LEL+NQ+DGFD N+KV+MATNR DTLDPAL+RPGRLDRKIEF LPD + +F
Sbjct: 297 RTMLELINQLDGFDPRGNIKVLMATNRPDTLDPALMRPGRLDRKIEFSLPDLEGRTHIFK 356
Query: 135 TITAKMNLSDEVDLEDYVAR--PDRISGADINAICQEVIMATNRA 177
M++ ++ E +AR P+ +GA+I ++C E M RA
Sbjct: 357 IHARSMSVERDIRFE-LLARLCPNS-TGAEIRSVCTEAGMFAIRA 399
Score = 239 (89.2 bits), Expect = 3.0e-18, P = 3.0e-18
Identities = 52/111 (46%), Positives = 71/111 (63%)
Query: 222 GNLQVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLVFSTITAKMNLSDEVDLED 281
GN++V+MATNR DTLDPAL+RPGRLDRKIEF LPD + +F M++ ++ E
Sbjct: 313 GNIKVLMATNRPDTLDPALMRPGRLDRKIEFSLPDLEGRTHIFKIHARSMSVERDIRFE- 371
Query: 282 YVAR--PDRISGADINAICQEAGMHAVRENRYIVLPKDFEKGYKKCAGMHA 330
+AR P+ +GA+I ++C EAGM A+R R I KDF + K +A
Sbjct: 372 LLARLCPNS-TGAEIRSVCTEAGMFAIRARRKIATEKDFLEAVNKVIKSYA 421
Score = 147 (56.8 bits), Expect = 3.8e-08, Sum P(2) = 3.8e-08
Identities = 29/48 (60%), Positives = 35/48 (72%)
Query: 169 EVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLVFSTITAKMN 216
+V+MATNR DTLDPAL+RPGRLDRKIEF LPD + +F M+
Sbjct: 316 KVLMATNRPDTLDPALMRPGRLDRKIEFSLPDLEGRTHIFKIHARSMS 363
Score = 47 (21.6 bits), Expect = 2.2e-38, Sum P(2) = 2.2e-38
Identities = 10/18 (55%), Positives = 11/18 (61%)
Query: 326 AGMHAVRENRYIVLPKDF 343
AGM A+R R I KDF
Sbjct: 392 AGMFAIRARRKIATEKDF 409
>UNIPROTKB|F1PPH7 [details] [associations]
symbol:PSMC2 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0022624 "proteasome accessory complex"
evidence=IEA] [GO:0016887 "ATPase activity" evidence=IEA]
[GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=IEA] [GO:0005739 "mitochondrion" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005739 GO:GO:0005524 GO:GO:0005634 GO:GO:0016887
GO:GO:0000502 GO:GO:0006511 TIGRFAMs:TIGR01242 KO:K03061
OMA:DIRWELI CTD:5701 GeneTree:ENSGT00550000074978 EMBL:AAEX03011248
RefSeq:XP_533103.3 ProteinModelPortal:F1PPH7
Ensembl:ENSCAFT00000006754 GeneID:475896 KEGG:cfa:475896
Uniprot:F1PPH7
Length = 433
Score = 380 (138.8 bits), Expect = 2.2e-38, Sum P(2) = 2.2e-38
Identities = 81/165 (49%), Positives = 105/165 (63%)
Query: 15 FIRVVGSEFVQKYLGEGPRMVRDVFRLAKENSPXXXXXXXXXXXXTKRFDAQTGADREVQ 74
FIRV+GSE VQKY+GEG RMVR++F +A+ RFD G D EVQ
Sbjct: 237 FIRVIGSELVQKYVGEGARMVRELFEMARTKKACLIFFDEIDAIGGARFDDGAGGDNEVQ 296
Query: 75 RILLELLNQMDGFDQTTNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLVFS 134
R +LEL+NQ+DGFD N+KV+MATNR DTLDPAL+RPGRLDRKIEF LPD + +F
Sbjct: 297 RTMLELINQLDGFDPRGNIKVLMATNRPDTLDPALMRPGRLDRKIEFSLPDLEGRTHIFK 356
Query: 135 TITAKMNLSDEVDLEDYVAR--PDRISGADINAICQEVIMATNRA 177
M++ ++ E +AR P+ +GA+I ++C E M RA
Sbjct: 357 IHARSMSVERDIRFE-LLARLCPNS-TGAEIRSVCTEAGMFAIRA 399
Score = 239 (89.2 bits), Expect = 3.0e-18, P = 3.0e-18
Identities = 52/111 (46%), Positives = 71/111 (63%)
Query: 222 GNLQVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLVFSTITAKMNLSDEVDLED 281
GN++V+MATNR DTLDPAL+RPGRLDRKIEF LPD + +F M++ ++ E
Sbjct: 313 GNIKVLMATNRPDTLDPALMRPGRLDRKIEFSLPDLEGRTHIFKIHARSMSVERDIRFE- 371
Query: 282 YVAR--PDRISGADINAICQEAGMHAVRENRYIVLPKDFEKGYKKCAGMHA 330
+AR P+ +GA+I ++C EAGM A+R R I KDF + K +A
Sbjct: 372 LLARLCPNS-TGAEIRSVCTEAGMFAIRARRKIATEKDFLEAVNKVIKSYA 421
Score = 147 (56.8 bits), Expect = 3.8e-08, Sum P(2) = 3.8e-08
Identities = 29/48 (60%), Positives = 35/48 (72%)
Query: 169 EVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLVFSTITAKMN 216
+V+MATNR DTLDPAL+RPGRLDRKIEF LPD + +F M+
Sbjct: 316 KVLMATNRPDTLDPALMRPGRLDRKIEFSLPDLEGRTHIFKIHARSMS 363
Score = 47 (21.6 bits), Expect = 2.2e-38, Sum P(2) = 2.2e-38
Identities = 10/18 (55%), Positives = 11/18 (61%)
Query: 326 AGMHAVRENRYIVLPKDF 343
AGM A+R R I KDF
Sbjct: 392 AGMFAIRARRKIATEKDF 409
>UNIPROTKB|B7Z5E2 [details] [associations]
symbol:PSMC2 "cDNA FLJ52353, highly similar to 26S protease
regulatory subunit 7" species:9606 "Homo sapiens" [GO:0005737
"cytoplasm" evidence=IEA] [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0006508
"proteolysis" evidence=IEA] [GO:0008233 "peptidase activity"
evidence=IEA] [GO:0022624 "proteasome accessory complex"
evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005737 GO:GO:0006508
GO:GO:0030163 GO:GO:0017111 GO:GO:0008233 EMBL:AC004668
TIGRFAMs:TIGR01242 HOVERGEN:HBG000109 UniGene:Hs.437366
HGNC:HGNC:9548 ChiTaRS:PSMC2 EMBL:AC093701 EMBL:AK298821
IPI:IPI01015219 SMR:B7Z5E2 STRING:B7Z5E2 Ensembl:ENST00000544811
Uniprot:B7Z5E2
Length = 296
Score = 380 (138.8 bits), Expect = 2.2e-38, Sum P(2) = 2.2e-38
Identities = 81/165 (49%), Positives = 105/165 (63%)
Query: 15 FIRVVGSEFVQKYLGEGPRMVRDVFRLAKENSPXXXXXXXXXXXXTKRFDAQTGADREVQ 74
FIRV+GSE VQKY+GEG RMVR++F +A+ RFD G D EVQ
Sbjct: 100 FIRVIGSELVQKYVGEGARMVRELFEMARTKKACLIFFDEIDAIGGARFDDGAGGDNEVQ 159
Query: 75 RILLELLNQMDGFDQTTNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLVFS 134
R +LEL+NQ+DGFD N+KV+MATNR DTLDPAL+RPGRLDRKIEF LPD + +F
Sbjct: 160 RTMLELINQLDGFDPRGNIKVLMATNRPDTLDPALMRPGRLDRKIEFSLPDLEGRTHIFK 219
Query: 135 TITAKMNLSDEVDLEDYVAR--PDRISGADINAICQEVIMATNRA 177
M++ ++ E +AR P+ +GA+I ++C E M RA
Sbjct: 220 IHARSMSVERDIRFE-LLARLCPNS-TGAEIRSVCTEAGMFAIRA 262
Score = 239 (89.2 bits), Expect = 3.5e-20, P = 3.5e-20
Identities = 52/111 (46%), Positives = 71/111 (63%)
Query: 222 GNLQVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLVFSTITAKMNLSDEVDLED 281
GN++V+MATNR DTLDPAL+RPGRLDRKIEF LPD + +F M++ ++ E
Sbjct: 176 GNIKVLMATNRPDTLDPALMRPGRLDRKIEFSLPDLEGRTHIFKIHARSMSVERDIRFE- 234
Query: 282 YVAR--PDRISGADINAICQEAGMHAVRENRYIVLPKDFEKGYKKCAGMHA 330
+AR P+ +GA+I ++C EAGM A+R R I KDF + K +A
Sbjct: 235 LLARLCPNS-TGAEIRSVCTEAGMFAIRARRKIATEKDFLEAVNKVIKSYA 284
Score = 147 (56.8 bits), Expect = 6.8e-09, Sum P(2) = 6.8e-09
Identities = 29/48 (60%), Positives = 35/48 (72%)
Query: 169 EVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLVFSTITAKMN 216
+V+MATNR DTLDPAL+RPGRLDRKIEF LPD + +F M+
Sbjct: 179 KVLMATNRPDTLDPALMRPGRLDRKIEFSLPDLEGRTHIFKIHARSMS 226
Score = 47 (21.6 bits), Expect = 2.2e-38, Sum P(2) = 2.2e-38
Identities = 10/18 (55%), Positives = 11/18 (61%)
Query: 326 AGMHAVRENRYIVLPKDF 343
AGM A+R R I KDF
Sbjct: 255 AGMFAIRARRKIATEKDF 272
>UNIPROTKB|P35998 [details] [associations]
symbol:PSMC2 "26S protease regulatory subunit 7"
species:9606 "Homo sapiens" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0019048 "virus-host interaction" evidence=IEA] [GO:0005515
"protein binding" evidence=IPI] [GO:0005737 "cytoplasm"
evidence=IDA;TAS] [GO:0016887 "ATPase activity" evidence=IDA]
[GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=IDA] [GO:0000502 "proteasome complex" evidence=IDA]
[GO:0000932 "cytoplasmic mRNA processing body" evidence=ISS]
[GO:0022624 "proteasome accessory complex" evidence=ISS]
[GO:0000075 "cell cycle checkpoint" evidence=TAS] [GO:0000082 "G1/S
transition of mitotic cell cycle" evidence=TAS] [GO:0000084 "S
phase of mitotic cell cycle" evidence=TAS] [GO:0000209 "protein
polyubiquitination" evidence=TAS] [GO:0000216 "M/G1 transition of
mitotic cell cycle" evidence=TAS] [GO:0000278 "mitotic cell cycle"
evidence=TAS] [GO:0002474 "antigen processing and presentation of
peptide antigen via MHC class I" evidence=TAS] [GO:0002479 "antigen
processing and presentation of exogenous peptide antigen via MHC
class I, TAP-dependent" evidence=TAS] [GO:0005654 "nucleoplasm"
evidence=TAS] [GO:0005829 "cytosol" evidence=TAS] [GO:0006521
"regulation of cellular amino acid metabolic process" evidence=TAS]
[GO:0006915 "apoptotic process" evidence=TAS] [GO:0006977 "DNA
damage response, signal transduction by p53 class mediator
resulting in cell cycle arrest" evidence=TAS] [GO:0010467 "gene
expression" evidence=TAS] [GO:0016032 "viral reproduction"
evidence=TAS] [GO:0016070 "RNA metabolic process" evidence=TAS]
[GO:0016071 "mRNA metabolic process" evidence=TAS] [GO:0031145
"anaphase-promoting complex-dependent proteasomal
ubiquitin-dependent protein catabolic process" evidence=TAS]
[GO:0034641 "cellular nitrogen compound metabolic process"
evidence=TAS] [GO:0042590 "antigen processing and presentation of
exogenous peptide antigen via MHC class I" evidence=TAS]
[GO:0042981 "regulation of apoptotic process" evidence=TAS]
[GO:0044281 "small molecule metabolic process" evidence=TAS]
[GO:0051436 "negative regulation of ubiquitin-protein ligase
activity involved in mitotic cell cycle" evidence=TAS] [GO:0051437
"positive regulation of ubiquitin-protein ligase activity involved
in mitotic cell cycle" evidence=TAS] [GO:0051439 "regulation of
ubiquitin-protein ligase activity involved in mitotic cell cycle"
evidence=TAS] [GO:0006200 "ATP catabolic process" evidence=IDA]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005730 "nucleolus"
evidence=IDA] [GO:0005739 "mitochondrion" evidence=IDA]
Reactome:REACT_13505 Reactome:REACT_578 Reactome:REACT_71
Reactome:REACT_21257 Reactome:REACT_6850 Reactome:REACT_111217
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005829 GO:GO:0005739 GO:GO:0005524 Reactome:REACT_111102
Reactome:REACT_116125 Reactome:REACT_6900 GO:GO:0006915
GO:GO:0010467 GO:GO:0016071 Reactome:REACT_115566 GO:GO:0019048
GO:GO:0005654 GO:GO:0002479 GO:GO:0016032 Reactome:REACT_21300
GO:GO:0006977 GO:GO:0042981 GO:GO:0000082 GO:GO:0016887
GO:GO:0051436 GO:GO:0000932 EMBL:CH471070 GO:GO:0000216
GO:GO:0000209 GO:GO:0000084 GO:GO:0031145 GO:GO:0051437
EMBL:CH236947 GO:GO:0006521 Reactome:REACT_383 eggNOG:COG1222
TIGRFAMs:TIGR01242 HOVERGEN:HBG000109 GO:GO:0022624
HOGENOM:HOG000225143 KO:K03061 OMA:DIRWELI CTD:5701 EMBL:D11094
EMBL:AB075520 EMBL:BC002589 IPI:IPI00021435 PIR:S24353
RefSeq:NP_001191382.1 RefSeq:NP_002794.1 UniGene:Hs.437366
ProteinModelPortal:P35998 SMR:P35998 DIP:DIP-27554N IntAct:P35998
MINT:MINT-1163662 STRING:P35998 PhosphoSite:P35998 DMDM:547930
OGP:P35998 REPRODUCTION-2DPAGE:IPI00021435
REPRODUCTION-2DPAGE:P35998 PaxDb:P35998 PeptideAtlas:P35998
PRIDE:P35998 DNASU:5701 Ensembl:ENST00000292644
Ensembl:ENST00000435765 GeneID:5701 KEGG:hsa:5701 UCSC:uc003vbs.3
GeneCards:GC07P102984 HGNC:HGNC:9548 HPA:HPA019238 MIM:154365
neXtProt:NX_P35998 PharmGKB:PA33893 InParanoid:P35998
PhylomeDB:P35998 ChiTaRS:PSMC2 GenomeRNAi:5701 NextBio:22150
ArrayExpress:P35998 Bgee:P35998 CleanEx:HS_PSMC2
Genevestigator:P35998 GermOnline:ENSG00000161057 Uniprot:P35998
Length = 433
Score = 380 (138.8 bits), Expect = 2.2e-38, Sum P(2) = 2.2e-38
Identities = 81/165 (49%), Positives = 105/165 (63%)
Query: 15 FIRVVGSEFVQKYLGEGPRMVRDVFRLAKENSPXXXXXXXXXXXXTKRFDAQTGADREVQ 74
FIRV+GSE VQKY+GEG RMVR++F +A+ RFD G D EVQ
Sbjct: 237 FIRVIGSELVQKYVGEGARMVRELFEMARTKKACLIFFDEIDAIGGARFDDGAGGDNEVQ 296
Query: 75 RILLELLNQMDGFDQTTNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLVFS 134
R +LEL+NQ+DGFD N+KV+MATNR DTLDPAL+RPGRLDRKIEF LPD + +F
Sbjct: 297 RTMLELINQLDGFDPRGNIKVLMATNRPDTLDPALMRPGRLDRKIEFSLPDLEGRTHIFK 356
Query: 135 TITAKMNLSDEVDLEDYVAR--PDRISGADINAICQEVIMATNRA 177
M++ ++ E +AR P+ +GA+I ++C E M RA
Sbjct: 357 IHARSMSVERDIRFE-LLARLCPNS-TGAEIRSVCTEAGMFAIRA 399
Score = 239 (89.2 bits), Expect = 3.0e-18, P = 3.0e-18
Identities = 52/111 (46%), Positives = 71/111 (63%)
Query: 222 GNLQVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLVFSTITAKMNLSDEVDLED 281
GN++V+MATNR DTLDPAL+RPGRLDRKIEF LPD + +F M++ ++ E
Sbjct: 313 GNIKVLMATNRPDTLDPALMRPGRLDRKIEFSLPDLEGRTHIFKIHARSMSVERDIRFE- 371
Query: 282 YVAR--PDRISGADINAICQEAGMHAVRENRYIVLPKDFEKGYKKCAGMHA 330
+AR P+ +GA+I ++C EAGM A+R R I KDF + K +A
Sbjct: 372 LLARLCPNS-TGAEIRSVCTEAGMFAIRARRKIATEKDFLEAVNKVIKSYA 421
Score = 147 (56.8 bits), Expect = 3.8e-08, Sum P(2) = 3.8e-08
Identities = 29/48 (60%), Positives = 35/48 (72%)
Query: 169 EVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLVFSTITAKMN 216
+V+MATNR DTLDPAL+RPGRLDRKIEF LPD + +F M+
Sbjct: 316 KVLMATNRPDTLDPALMRPGRLDRKIEFSLPDLEGRTHIFKIHARSMS 363
Score = 47 (21.6 bits), Expect = 2.2e-38, Sum P(2) = 2.2e-38
Identities = 10/18 (55%), Positives = 11/18 (61%)
Query: 326 AGMHAVRENRYIVLPKDF 343
AGM A+R R I KDF
Sbjct: 392 AGMFAIRARRKIATEKDF 409
>UNIPROTKB|F1SB53 [details] [associations]
symbol:PSMC2 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005524 "ATP binding" evidence=IEA] [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005737 GO:GO:0030163
GO:GO:0017111 TIGRFAMs:TIGR01242 GeneTree:ENSGT00550000074978
OMA:HIFTIHA EMBL:CU570825 Ensembl:ENSSSCT00000016802 Uniprot:F1SB53
Length = 475
Score = 380 (138.8 bits), Expect = 2.2e-38, Sum P(2) = 2.2e-38
Identities = 81/165 (49%), Positives = 105/165 (63%)
Query: 15 FIRVVGSEFVQKYLGEGPRMVRDVFRLAKENSPXXXXXXXXXXXXTKRFDAQTGADREVQ 74
FIRV+GSE VQKY+GEG RMVR++F +A+ RFD G D EVQ
Sbjct: 279 FIRVIGSELVQKYVGEGARMVRELFEMARTKKACLIFFDEIDAIGGARFDDGAGGDNEVQ 338
Query: 75 RILLELLNQMDGFDQTTNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLVFS 134
R +LEL+NQ+DGFD N+KV+MATNR DTLDPAL+RPGRLDRKIEF LPD + +F
Sbjct: 339 RTMLELINQLDGFDPRGNIKVLMATNRPDTLDPALMRPGRLDRKIEFSLPDLEGRTHIFK 398
Query: 135 TITAKMNLSDEVDLEDYVAR--PDRISGADINAICQEVIMATNRA 177
M++ ++ E +AR P+ +GA+I ++C E M RA
Sbjct: 399 IHARSMSVERDIRFE-LLARLCPNS-TGAEIRSVCTEAGMFAIRA 441
Score = 239 (89.2 bits), Expect = 4.1e-18, P = 4.1e-18
Identities = 52/111 (46%), Positives = 71/111 (63%)
Query: 222 GNLQVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLVFSTITAKMNLSDEVDLED 281
GN++V+MATNR DTLDPAL+RPGRLDRKIEF LPD + +F M++ ++ E
Sbjct: 355 GNIKVLMATNRPDTLDPALMRPGRLDRKIEFSLPDLEGRTHIFKIHARSMSVERDIRFE- 413
Query: 282 YVAR--PDRISGADINAICQEAGMHAVRENRYIVLPKDFEKGYKKCAGMHA 330
+AR P+ +GA+I ++C EAGM A+R R I KDF + K +A
Sbjct: 414 LLARLCPNS-TGAEIRSVCTEAGMFAIRARRKIATEKDFLEAVNKVIKSYA 463
Score = 147 (56.8 bits), Expect = 5.3e-08, Sum P(2) = 5.3e-08
Identities = 29/48 (60%), Positives = 35/48 (72%)
Query: 169 EVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLVFSTITAKMN 216
+V+MATNR DTLDPAL+RPGRLDRKIEF LPD + +F M+
Sbjct: 358 KVLMATNRPDTLDPALMRPGRLDRKIEFSLPDLEGRTHIFKIHARSMS 405
Score = 47 (21.6 bits), Expect = 2.2e-38, Sum P(2) = 2.2e-38
Identities = 10/18 (55%), Positives = 11/18 (61%)
Query: 326 AGMHAVRENRYIVLPKDF 343
AGM A+R R I KDF
Sbjct: 434 AGMFAIRARRKIATEKDF 451
>UNIPROTKB|I3LJ30 [details] [associations]
symbol:I3LJ30 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005524 "ATP binding" evidence=IEA] [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005737 GO:GO:0030163
GO:GO:0017111 TIGRFAMs:TIGR01242 GeneTree:ENSGT00550000074978
Ensembl:ENSSSCT00000030050 OMA:WDLAYEN Uniprot:I3LJ30
Length = 434
Score = 380 (138.8 bits), Expect = 2.2e-38, Sum P(2) = 2.2e-38
Identities = 81/165 (49%), Positives = 105/165 (63%)
Query: 15 FIRVVGSEFVQKYLGEGPRMVRDVFRLAKENSPXXXXXXXXXXXXTKRFDAQTGADREVQ 74
FIRV+GSE VQKY+GEG RMVR++F +A+ RFD G D EVQ
Sbjct: 238 FIRVIGSELVQKYVGEGARMVRELFEMARTKKACLIFFDEIDAIGGARFDDGAGGDNEVQ 297
Query: 75 RILLELLNQMDGFDQTTNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLVFS 134
R +LEL+NQ+DGFD N+KV+MATNR DTLDPAL+RPGRLDRKIEF LPD + +F
Sbjct: 298 RTMLELINQLDGFDPRGNIKVLMATNRPDTLDPALMRPGRLDRKIEFSLPDLEGRTHIFK 357
Query: 135 TITAKMNLSDEVDLEDYVAR--PDRISGADINAICQEVIMATNRA 177
M++ ++ E +AR P+ +GA+I ++C E M RA
Sbjct: 358 IHARSMSVERDIRFE-LLARLCPNS-TGAEIRSVCTEAGMFAIRA 400
Score = 239 (89.2 bits), Expect = 3.0e-18, P = 3.0e-18
Identities = 52/111 (46%), Positives = 71/111 (63%)
Query: 222 GNLQVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLVFSTITAKMNLSDEVDLED 281
GN++V+MATNR DTLDPAL+RPGRLDRKIEF LPD + +F M++ ++ E
Sbjct: 314 GNIKVLMATNRPDTLDPALMRPGRLDRKIEFSLPDLEGRTHIFKIHARSMSVERDIRFE- 372
Query: 282 YVAR--PDRISGADINAICQEAGMHAVRENRYIVLPKDFEKGYKKCAGMHA 330
+AR P+ +GA+I ++C EAGM A+R R I KDF + K +A
Sbjct: 373 LLARLCPNS-TGAEIRSVCTEAGMFAIRARRKIATEKDFLEAVNKVIKSYA 422
Score = 147 (56.8 bits), Expect = 3.9e-08, Sum P(2) = 3.9e-08
Identities = 29/48 (60%), Positives = 35/48 (72%)
Query: 169 EVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLVFSTITAKMN 216
+V+MATNR DTLDPAL+RPGRLDRKIEF LPD + +F M+
Sbjct: 317 KVLMATNRPDTLDPALMRPGRLDRKIEFSLPDLEGRTHIFKIHARSMS 364
Score = 47 (21.6 bits), Expect = 2.2e-38, Sum P(2) = 2.2e-38
Identities = 10/18 (55%), Positives = 11/18 (61%)
Query: 326 AGMHAVRENRYIVLPKDF 343
AGM A+R R I KDF
Sbjct: 393 AGMFAIRARRKIATEKDF 410
>UNIPROTKB|Q4R4R0 [details] [associations]
symbol:PSMC2 "26S protease regulatory subunit 7"
species:9541 "Macaca fascicularis" [GO:0000502 "proteasome complex"
evidence=ISS] [GO:0000932 "cytoplasmic mRNA processing body"
evidence=ISS] [GO:0006200 "ATP catabolic process" evidence=ISS]
[GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=ISS] [GO:0016887 "ATPase activity" evidence=ISS]
[GO:0022624 "proteasome accessory complex" evidence=ISS]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0005634 GO:GO:0016887 GO:GO:0006511 HSSP:Q9WZ49
GO:GO:0000932 TIGRFAMs:TIGR01242 HOVERGEN:HBG000109 GO:GO:0022624
EMBL:AB169834 ProteinModelPortal:Q4R4R0 SMR:Q4R4R0 PRIDE:Q4R4R0
Uniprot:Q4R4R0
Length = 433
Score = 380 (138.8 bits), Expect = 2.2e-38, Sum P(2) = 2.2e-38
Identities = 81/165 (49%), Positives = 105/165 (63%)
Query: 15 FIRVVGSEFVQKYLGEGPRMVRDVFRLAKENSPXXXXXXXXXXXXTKRFDAQTGADREVQ 74
FIRV+GSE VQKY+GEG RMVR++F +A+ RFD G D EVQ
Sbjct: 237 FIRVIGSELVQKYVGEGARMVRELFEMARTKKACLIFFDEIDAIGGARFDDGAGGDNEVQ 296
Query: 75 RILLELLNQMDGFDQTTNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLVFS 134
R +LEL+NQ+DGFD N+KV+MATNR DTLDPAL+RPGRLDRKIEF LPD + +F
Sbjct: 297 RTMLELINQLDGFDPRGNIKVLMATNRPDTLDPALMRPGRLDRKIEFSLPDLEGRTHIFK 356
Query: 135 TITAKMNLSDEVDLEDYVAR--PDRISGADINAICQEVIMATNRA 177
M++ ++ E +AR P+ +GA+I ++C E M RA
Sbjct: 357 IHARSMSVERDIRFE-LLARLCPNS-TGAEIRSVCTEAGMFAIRA 399
Score = 239 (89.2 bits), Expect = 3.0e-18, P = 3.0e-18
Identities = 52/111 (46%), Positives = 71/111 (63%)
Query: 222 GNLQVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLVFSTITAKMNLSDEVDLED 281
GN++V+MATNR DTLDPAL+RPGRLDRKIEF LPD + +F M++ ++ E
Sbjct: 313 GNIKVLMATNRPDTLDPALMRPGRLDRKIEFSLPDLEGRTHIFKIHARSMSVERDIRFE- 371
Query: 282 YVAR--PDRISGADINAICQEAGMHAVRENRYIVLPKDFEKGYKKCAGMHA 330
+AR P+ +GA+I ++C EAGM A+R R I KDF + K +A
Sbjct: 372 LLARLCPNS-TGAEIRSVCTEAGMFAIRARRKIATEKDFLEAVNKVIKSYA 421
Score = 147 (56.8 bits), Expect = 3.8e-08, Sum P(2) = 3.8e-08
Identities = 29/48 (60%), Positives = 35/48 (72%)
Query: 169 EVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLVFSTITAKMN 216
+V+MATNR DTLDPAL+RPGRLDRKIEF LPD + +F M+
Sbjct: 316 KVLMATNRPDTLDPALMRPGRLDRKIEFSLPDLEGRTHIFKIHARSMS 363
Score = 47 (21.6 bits), Expect = 2.2e-38, Sum P(2) = 2.2e-38
Identities = 10/18 (55%), Positives = 11/18 (61%)
Query: 326 AGMHAVRENRYIVLPKDF 343
AGM A+R R I KDF
Sbjct: 392 AGMFAIRARRKIATEKDF 409
>MGI|MGI:109555 [details] [associations]
symbol:Psmc2 "proteasome (prosome, macropain) 26S subunit,
ATPase 2" species:10090 "Mus musculus" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0000502 "proteasome complex"
evidence=ISO] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=ISO] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0006200
"ATP catabolic process" evidence=ISO] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=ISO]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0016887 "ATPase
activity" evidence=ISO] [GO:0017025 "TBP-class protein binding"
evidence=ISO] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0022624 "proteasome accessory complex"
evidence=IDA] [GO:0030163 "protein catabolic process" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
MGI:MGI:109555 GO:GO:0005739 GO:GO:0005524 GO:GO:0005634
GO:GO:0016887 GO:GO:0006511 GO:GO:0000932 eggNOG:COG1222
TIGRFAMs:TIGR01242 HOVERGEN:HBG000109 GO:GO:0022624
OrthoDB:EOG4RXZ05 ChiTaRS:PSMC2 EMBL:AK005083 EMBL:AK168548
EMBL:BC005462 EMBL:U61283 IPI:IPI00270326 PIR:S39349
UniGene:Mm.2462 ProteinModelPortal:P46471 SMR:P46471 IntAct:P46471
STRING:P46471 PhosphoSite:P46471 REPRODUCTION-2DPAGE:P46471
SWISS-2DPAGE:P46471 PaxDb:P46471 PRIDE:P46471 InParanoid:P46471
Bgee:P46471 Genevestigator:P46471 GermOnline:ENSMUSG00000028932
Uniprot:P46471
Length = 433
Score = 380 (138.8 bits), Expect = 2.2e-38, Sum P(2) = 2.2e-38
Identities = 81/165 (49%), Positives = 105/165 (63%)
Query: 15 FIRVVGSEFVQKYLGEGPRMVRDVFRLAKENSPXXXXXXXXXXXXTKRFDAQTGADREVQ 74
FIRV+GSE VQKY+GEG RMVR++F +A+ RFD G D EVQ
Sbjct: 237 FIRVIGSELVQKYVGEGARMVRELFEMARTKKACLIFFDEIDAIGGARFDDGAGGDNEVQ 296
Query: 75 RILLELLNQMDGFDQTTNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLVFS 134
R +LEL+NQ+DGFD N+KV+MATNR DTLDPAL+RPGRLDRKIEF LPD + +F
Sbjct: 297 RTMLELINQLDGFDPRGNIKVLMATNRPDTLDPALMRPGRLDRKIEFSLPDLEGRTHIFK 356
Query: 135 TITAKMNLSDEVDLEDYVAR--PDRISGADINAICQEVIMATNRA 177
M++ ++ E +AR P+ +GA+I ++C E M RA
Sbjct: 357 IHARSMSVERDIRFE-LLARLCPNS-TGAEIRSVCTEAGMFAIRA 399
Score = 239 (89.2 bits), Expect = 3.0e-18, P = 3.0e-18
Identities = 52/111 (46%), Positives = 71/111 (63%)
Query: 222 GNLQVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLVFSTITAKMNLSDEVDLED 281
GN++V+MATNR DTLDPAL+RPGRLDRKIEF LPD + +F M++ ++ E
Sbjct: 313 GNIKVLMATNRPDTLDPALMRPGRLDRKIEFSLPDLEGRTHIFKIHARSMSVERDIRFE- 371
Query: 282 YVAR--PDRISGADINAICQEAGMHAVRENRYIVLPKDFEKGYKKCAGMHA 330
+AR P+ +GA+I ++C EAGM A+R R I KDF + K +A
Sbjct: 372 LLARLCPNS-TGAEIRSVCTEAGMFAIRARRKIATEKDFLEAVNKVIKSYA 421
Score = 147 (56.8 bits), Expect = 3.8e-08, Sum P(2) = 3.8e-08
Identities = 29/48 (60%), Positives = 35/48 (72%)
Query: 169 EVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLVFSTITAKMN 216
+V+MATNR DTLDPAL+RPGRLDRKIEF LPD + +F M+
Sbjct: 316 KVLMATNRPDTLDPALMRPGRLDRKIEFSLPDLEGRTHIFKIHARSMS 363
Score = 47 (21.6 bits), Expect = 2.2e-38, Sum P(2) = 2.2e-38
Identities = 10/18 (55%), Positives = 11/18 (61%)
Query: 326 AGMHAVRENRYIVLPKDF 343
AGM A+R R I KDF
Sbjct: 392 AGMFAIRARRKIATEKDF 409
>ZFIN|ZDB-GENE-040426-1327 [details] [associations]
symbol:psmc2 "proteasome (prosome, macropain) 26S
subunit, ATPase 2" species:7955 "Danio rerio" [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0000502 "proteasome complex"
evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 ZFIN:ZDB-GENE-040426-1327 GO:GO:0005524 GO:GO:0005737
GO:GO:0030163 GO:GO:0000502 GO:GO:0017111 eggNOG:COG1222
TIGRFAMs:TIGR01242 HOVERGEN:HBG000109 HOGENOM:HOG000225143
KO:K03061 OMA:DIRWELI CTD:5701 GeneTree:ENSGT00550000074978
OrthoDB:EOG4RXZ05 HSSP:Q9LCZ4 EMBL:BX571796 EMBL:BC053187
IPI:IPI00491385 RefSeq:NP_957260.1 UniGene:Dr.75589 STRING:Q7T3B1
Ensembl:ENSDART00000019647 GeneID:393941 KEGG:dre:393941
InParanoid:Q7T3B1 NextBio:20814913 Uniprot:Q7T3B1
Length = 433
Score = 380 (138.8 bits), Expect = 2.2e-38, Sum P(2) = 2.2e-38
Identities = 81/165 (49%), Positives = 105/165 (63%)
Query: 15 FIRVVGSEFVQKYLGEGPRMVRDVFRLAKENSPXXXXXXXXXXXXTKRFDAQTGADREVQ 74
FIRV+GSE VQKY+GEG RMVR++F +A+ RFD G D EVQ
Sbjct: 237 FIRVIGSELVQKYVGEGARMVRELFEMARTKKACLIFFDEIDAIGGARFDDGAGGDNEVQ 296
Query: 75 RILLELLNQMDGFDQTTNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLVFS 134
R +LEL+NQ+DGFD N+KV+MATNR DTLDPAL+RPGRLDRKIEF LPD + +F
Sbjct: 297 RTMLELINQLDGFDPRGNIKVLMATNRPDTLDPALMRPGRLDRKIEFSLPDLEGRTHIFK 356
Query: 135 TITAKMNLSDEVDLEDYVAR--PDRISGADINAICQEVIMATNRA 177
M++ ++ E +AR P+ +GA+I ++C E M RA
Sbjct: 357 IHARSMSVERDIRFE-LLARLCPNS-TGAEIRSVCTEAGMFAIRA 399
Score = 239 (89.2 bits), Expect = 3.0e-18, P = 3.0e-18
Identities = 52/111 (46%), Positives = 71/111 (63%)
Query: 222 GNLQVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLVFSTITAKMNLSDEVDLED 281
GN++V+MATNR DTLDPAL+RPGRLDRKIEF LPD + +F M++ ++ E
Sbjct: 313 GNIKVLMATNRPDTLDPALMRPGRLDRKIEFSLPDLEGRTHIFKIHARSMSVERDIRFE- 371
Query: 282 YVAR--PDRISGADINAICQEAGMHAVRENRYIVLPKDFEKGYKKCAGMHA 330
+AR P+ +GA+I ++C EAGM A+R R I KDF + K +A
Sbjct: 372 LLARLCPNS-TGAEIRSVCTEAGMFAIRARRKIATEKDFLEAVNKVIKSYA 421
Score = 147 (56.8 bits), Expect = 3.8e-08, Sum P(2) = 3.8e-08
Identities = 29/48 (60%), Positives = 35/48 (72%)
Query: 169 EVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLVFSTITAKMN 216
+V+MATNR DTLDPAL+RPGRLDRKIEF LPD + +F M+
Sbjct: 316 KVLMATNRPDTLDPALMRPGRLDRKIEFSLPDLEGRTHIFKIHARSMS 363
Score = 47 (21.6 bits), Expect = 2.2e-38, Sum P(2) = 2.2e-38
Identities = 10/18 (55%), Positives = 11/18 (61%)
Query: 326 AGMHAVRENRYIVLPKDF 343
AGM A+R R I KDF
Sbjct: 392 AGMFAIRARRKIATEKDF 409
>UNIPROTKB|P46472 [details] [associations]
symbol:psmc2 "26S protease regulatory subunit 7"
species:8355 "Xenopus laevis" [GO:0000502 "proteasome complex"
evidence=ISS] [GO:0006200 "ATP catabolic process" evidence=ISS]
[GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=ISS] [GO:0016887 "ATPase activity" evidence=ISS]
[GO:0022624 "proteasome accessory complex" evidence=ISS]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0016887
GO:GO:0006511 TIGRFAMs:TIGR01242 HOVERGEN:HBG000109 GO:GO:0022624
KO:K03061 CTD:5701 EMBL:X80157 EMBL:BC054143 PIR:S53709
RefSeq:NP_001084136.1 UniGene:Xl.57157 ProteinModelPortal:P46472
GeneID:399327 KEGG:xla:399327 Xenbase:XB-GENE-1000023
Uniprot:P46472
Length = 433
Score = 380 (138.8 bits), Expect = 2.8e-38, Sum P(2) = 2.8e-38
Identities = 81/165 (49%), Positives = 105/165 (63%)
Query: 15 FIRVVGSEFVQKYLGEGPRMVRDVFRLAKENSPXXXXXXXXXXXXTKRFDAQTGADREVQ 74
FIRV+GSE VQKY+GEG RMVR++F +A+ RFD G D EVQ
Sbjct: 237 FIRVIGSELVQKYVGEGARMVRELFEMARTKKACLIFFDEIDAIGGARFDDGAGGDNEVQ 296
Query: 75 RILLELLNQMDGFDQTTNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLVFS 134
R +LEL+NQ+DGFD N+KV+MATNR DTLDPAL+RPGRLDRKIEF LPD + +F
Sbjct: 297 RTMLELINQLDGFDPRGNIKVLMATNRPDTLDPALMRPGRLDRKIEFSLPDLEGRTHIFK 356
Query: 135 TITAKMNLSDEVDLEDYVAR--PDRISGADINAICQEVIMATNRA 177
M++ ++ E +AR P+ +GA+I ++C E M RA
Sbjct: 357 IHARSMSVERDIRFE-LLARLCPNS-TGAEIRSVCTEAGMFAIRA 399
Score = 238 (88.8 bits), Expect = 4.0e-18, P = 4.0e-18
Identities = 51/111 (45%), Positives = 71/111 (63%)
Query: 222 GNLQVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLVFSTITAKMNLSDEVDLED 281
GN++V+MATNR DTLDPAL+RPGRLDRKIEF LPD + +F M++ ++ E
Sbjct: 313 GNIKVLMATNRPDTLDPALMRPGRLDRKIEFSLPDLEGRTHIFKIHARSMSVERDIRFE- 371
Query: 282 YVAR--PDRISGADINAICQEAGMHAVRENRYIVLPKDFEKGYKKCAGMHA 330
+AR P+ +GA+I ++C EAGM A+R R + KDF + K +A
Sbjct: 372 LLARLCPNS-TGAEIRSVCTEAGMFAIRARRKVATEKDFLEAVNKVIKSYA 421
Score = 147 (56.8 bits), Expect = 4.9e-08, Sum P(2) = 4.9e-08
Identities = 29/48 (60%), Positives = 35/48 (72%)
Query: 169 EVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLVFSTITAKMN 216
+V+MATNR DTLDPAL+RPGRLDRKIEF LPD + +F M+
Sbjct: 316 KVLMATNRPDTLDPALMRPGRLDRKIEFSLPDLEGRTHIFKIHARSMS 363
Score = 46 (21.3 bits), Expect = 2.8e-38, Sum P(2) = 2.8e-38
Identities = 9/18 (50%), Positives = 11/18 (61%)
Query: 326 AGMHAVRENRYIVLPKDF 343
AGM A+R R + KDF
Sbjct: 392 AGMFAIRARRKVATEKDF 409
>UNIPROTKB|F1NCS8 [details] [associations]
symbol:PSMC6 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0030163 "protein catabolic process" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005886
"plasma membrane" evidence=IEA] [GO:0022624 "proteasome accessory
complex" evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737
GO:GO:0030163 GO:GO:0000502 GO:GO:0017111 TIGRFAMs:TIGR01242
GeneTree:ENSGT00550000074826 OMA:EHKEVES EMBL:AADN02004069
IPI:IPI00570965 Ensembl:ENSGALT00000020277 ArrayExpress:F1NCS8
Uniprot:F1NCS8
Length = 403
Score = 373 (136.4 bits), Expect = 2.8e-38, Sum P(2) = 2.8e-38
Identities = 78/177 (44%), Positives = 104/177 (58%)
Query: 2 LLCTSFDTELVTAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENSPXXXXXXXXXXXXTK 61
LL + ++L F++VV S V KY+GE R++R++F A+++ P +
Sbjct: 196 LLARAVASQLDCNFLKVVSSSIVDKYIGESARLIREMFNYARDHQPCIIFMDEIDAIGGR 255
Query: 62 RFDAQTGADREVQRILLELLNQMDGFDQTTNVKVIMATNRADTLDPALLRPGRLDRKIEF 121
RF T ADRE+QR L+ELLNQMDGFD VK+IMATNR DTLDPALLRPGRLDRKI
Sbjct: 256 RFSEGTSADREIQRTLMELLNQMDGFDTLHRVKMIMATNRPDTLDPALLRPGRLDRKIHI 315
Query: 122 PLPDRRQKRLVFSTITAKMNLSDEVDLEDYVARPDRISGADINAICQEVIMATNRAD 178
LP+ + + + + E+D E V D +GAD+ +C E M RAD
Sbjct: 316 DLPNEQARLDILKIHAGPITKHGEIDYEAIVKLSDGFNGADLRNVCTEAGMFAIRAD 372
Score = 230 (86.0 bits), Expect = 3.2e-17, P = 3.2e-17
Identities = 50/127 (39%), Positives = 73/127 (57%)
Query: 200 DRRQKRLVFSTITAKMNFMLNIGNLQVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQ 259
DR +R + + +M+ + +++IMATNR DTLDPALLRPGRLDRKI LP+ +
Sbjct: 264 DREIQRTLMELLN-QMDGFDTLHRVKMIMATNRPDTLDPALLRPGRLDRKIHIDLPNEQA 322
Query: 260 KRLVFSTITAKMNLSDEVDLEDYVARPDRISGADINAICQEAGMHAVRENRYIVLPKDFE 319
+ + + E+D E V D +GAD+ +C EAGM A+R + V+ +DF
Sbjct: 323 RLDILKIHAGPITKHGEIDYEAIVKLSDGFNGADLRNVCTEAGMFAIRADHDFVVQEDFM 382
Query: 320 KGYKKCA 326
K +K A
Sbjct: 383 KAVRKVA 389
Score = 132 (51.5 bits), Expect = 3.8e-07, Sum P(2) = 3.8e-07
Identities = 28/38 (73%), Positives = 31/38 (81%)
Query: 169 EVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRL 206
++IMATNR DTLDPALLRPGRLDRKI LP+ Q RL
Sbjct: 288 KMIMATNRPDTLDPALLRPGRLDRKIHIDLPNE-QARL 324
Score = 53 (23.7 bits), Expect = 2.8e-38, Sum P(2) = 2.8e-38
Identities = 13/37 (35%), Positives = 23/37 (62%)
Query: 326 AGMHAVRENRYIVLPKDFEKGYKN--NTKKDESEHEF 360
AGM A+R + V+ +DF K + ++KK ES+ ++
Sbjct: 364 AGMFAIRADHDFVVQEDFMKAVRKVADSKKLESKLDY 400
>UNIPROTKB|Q5ZKX2 [details] [associations]
symbol:PSMC6 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0030163 "protein catabolic process" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005886
"plasma membrane" evidence=IEA] [GO:0022624 "proteasome accessory
complex" evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737
GO:GO:0030163 GO:GO:0000502 GO:GO:0017111 KO:K03064 eggNOG:COG1222
TIGRFAMs:TIGR01242 HOVERGEN:HBG000109 CTD:5706 HOGENOM:HOG000225143
OrthoDB:EOG408N84 GeneTree:ENSGT00550000074826 EMBL:AADN02004069
EMBL:AJ719962 IPI:IPI00820938 RefSeq:NP_001006494.1
UniGene:Gga.16005 STRING:Q5ZKX2 Ensembl:ENSGALT00000037197
GeneID:423586 KEGG:gga:423586 InParanoid:Q5ZKX2 NextBio:20826039
Uniprot:Q5ZKX2
Length = 389
Score = 373 (136.4 bits), Expect = 2.8e-38, Sum P(2) = 2.8e-38
Identities = 78/177 (44%), Positives = 104/177 (58%)
Query: 2 LLCTSFDTELVTAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENSPXXXXXXXXXXXXTK 61
LL + ++L F++VV S V KY+GE R++R++F A+++ P +
Sbjct: 182 LLARAVASQLDCNFLKVVSSSIVDKYIGESARLIREMFNYARDHQPCIIFMDEIDAIGGR 241
Query: 62 RFDAQTGADREVQRILLELLNQMDGFDQTTNVKVIMATNRADTLDPALLRPGRLDRKIEF 121
RF T ADRE+QR L+ELLNQMDGFD VK+IMATNR DTLDPALLRPGRLDRKI
Sbjct: 242 RFSEGTSADREIQRTLMELLNQMDGFDTLHRVKMIMATNRPDTLDPALLRPGRLDRKIHI 301
Query: 122 PLPDRRQKRLVFSTITAKMNLSDEVDLEDYVARPDRISGADINAICQEVIMATNRAD 178
LP+ + + + + E+D E V D +GAD+ +C E M RAD
Sbjct: 302 DLPNEQARLDILKIHAGPITKHGEIDYEAIVKLSDGFNGADLRNVCTEAGMFAIRAD 358
Score = 230 (86.0 bits), Expect = 2.7e-17, P = 2.7e-17
Identities = 50/127 (39%), Positives = 73/127 (57%)
Query: 200 DRRQKRLVFSTITAKMNFMLNIGNLQVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQ 259
DR +R + + +M+ + +++IMATNR DTLDPALLRPGRLDRKI LP+ +
Sbjct: 250 DREIQRTLMELLN-QMDGFDTLHRVKMIMATNRPDTLDPALLRPGRLDRKIHIDLPNEQA 308
Query: 260 KRLVFSTITAKMNLSDEVDLEDYVARPDRISGADINAICQEAGMHAVRENRYIVLPKDFE 319
+ + + E+D E V D +GAD+ +C EAGM A+R + V+ +DF
Sbjct: 309 RLDILKIHAGPITKHGEIDYEAIVKLSDGFNGADLRNVCTEAGMFAIRADHDFVVQEDFM 368
Query: 320 KGYKKCA 326
K +K A
Sbjct: 369 KAVRKVA 375
Score = 132 (51.5 bits), Expect = 3.4e-07, Sum P(2) = 3.4e-07
Identities = 28/38 (73%), Positives = 31/38 (81%)
Query: 169 EVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRL 206
++IMATNR DTLDPALLRPGRLDRKI LP+ Q RL
Sbjct: 274 KMIMATNRPDTLDPALLRPGRLDRKIHIDLPNE-QARL 310
Score = 53 (23.7 bits), Expect = 2.8e-38, Sum P(2) = 2.8e-38
Identities = 13/37 (35%), Positives = 23/37 (62%)
Query: 326 AGMHAVRENRYIVLPKDFEKGYKN--NTKKDESEHEF 360
AGM A+R + V+ +DF K + ++KK ES+ ++
Sbjct: 350 AGMFAIRADHDFVVQEDFMKAVRKVADSKKLESKLDY 386
>UNIPROTKB|F1MLV1 [details] [associations]
symbol:PSMC6 "26S protease regulatory subunit 10B"
species:9913 "Bos taurus" [GO:0022624 "proteasome accessory
complex" evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0030163
GO:GO:0000502 GO:GO:0017111 TIGRFAMs:TIGR01242 IPI:IPI00707369
UniGene:Bt.22570 GeneTree:ENSGT00550000074826 OMA:EHKEVES
EMBL:DAAA02027846 ProteinModelPortal:F1MLV1 SMR:F1MLV1 PRIDE:F1MLV1
Ensembl:ENSBTAT00000020886 Uniprot:F1MLV1
Length = 389
Score = 373 (136.4 bits), Expect = 2.8e-38, Sum P(2) = 2.8e-38
Identities = 78/177 (44%), Positives = 104/177 (58%)
Query: 2 LLCTSFDTELVTAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENSPXXXXXXXXXXXXTK 61
LL + ++L F++VV S V KY+GE R++R++F A+++ P +
Sbjct: 182 LLARAVASQLDCNFLKVVSSSIVDKYIGESARLIREMFNYARDHQPCIIFMDEIDAIGGR 241
Query: 62 RFDAQTGADREVQRILLELLNQMDGFDQTTNVKVIMATNRADTLDPALLRPGRLDRKIEF 121
RF T ADRE+QR L+ELLNQMDGFD VK+IMATNR DTLDPALLRPGRLDRKI
Sbjct: 242 RFSEGTSADREIQRTLMELLNQMDGFDTLHRVKMIMATNRPDTLDPALLRPGRLDRKIHI 301
Query: 122 PLPDRRQKRLVFSTITAKMNLSDEVDLEDYVARPDRISGADINAICQEVIMATNRAD 178
LP+ + + + + E+D E V D +GAD+ +C E M RAD
Sbjct: 302 DLPNEQARLDILKIHAGPITKHGEIDYEAIVKLSDGFNGADLRNVCTEAGMFAIRAD 358
Score = 230 (86.0 bits), Expect = 2.7e-17, P = 2.7e-17
Identities = 50/127 (39%), Positives = 73/127 (57%)
Query: 200 DRRQKRLVFSTITAKMNFMLNIGNLQVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQ 259
DR +R + + +M+ + +++IMATNR DTLDPALLRPGRLDRKI LP+ +
Sbjct: 250 DREIQRTLMELLN-QMDGFDTLHRVKMIMATNRPDTLDPALLRPGRLDRKIHIDLPNEQA 308
Query: 260 KRLVFSTITAKMNLSDEVDLEDYVARPDRISGADINAICQEAGMHAVRENRYIVLPKDFE 319
+ + + E+D E V D +GAD+ +C EAGM A+R + V+ +DF
Sbjct: 309 RLDILKIHAGPITKHGEIDYEAIVKLSDGFNGADLRNVCTEAGMFAIRADHDFVVQEDFM 368
Query: 320 KGYKKCA 326
K +K A
Sbjct: 369 KAVRKVA 375
Score = 132 (51.5 bits), Expect = 3.4e-07, Sum P(2) = 3.4e-07
Identities = 28/38 (73%), Positives = 31/38 (81%)
Query: 169 EVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRL 206
++IMATNR DTLDPALLRPGRLDRKI LP+ Q RL
Sbjct: 274 KMIMATNRPDTLDPALLRPGRLDRKIHIDLPNE-QARL 310
Score = 53 (23.7 bits), Expect = 2.8e-38, Sum P(2) = 2.8e-38
Identities = 13/37 (35%), Positives = 23/37 (62%)
Query: 326 AGMHAVRENRYIVLPKDFEKGYKN--NTKKDESEHEF 360
AGM A+R + V+ +DF K + ++KK ES+ ++
Sbjct: 350 AGMFAIRADHDFVVQEDFMKAVRKVADSKKLESKLDY 386
>UNIPROTKB|Q2KIW6 [details] [associations]
symbol:PSMC6 "26S protease regulatory subunit 10B"
species:9913 "Bos taurus" [GO:0022624 "proteasome accessory
complex" evidence=ISS] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0030163 "protein catabolic process" evidence=IEA]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0030163
GO:GO:0017111 HSSP:Q9WZ49 KO:K03064 eggNOG:COG1222
TIGRFAMs:TIGR01242 HOVERGEN:HBG000109 GO:GO:0022624 EMBL:BC112482
IPI:IPI00707369 RefSeq:NP_001039705.1 UniGene:Bt.22570
ProteinModelPortal:Q2KIW6 STRING:Q2KIW6 PRIDE:Q2KIW6 GeneID:518637
KEGG:bta:518637 CTD:5706 HOGENOM:HOG000225143 InParanoid:Q2KIW6
OrthoDB:EOG408N84 NextBio:20872697 Uniprot:Q2KIW6
Length = 389
Score = 373 (136.4 bits), Expect = 2.8e-38, Sum P(2) = 2.8e-38
Identities = 78/177 (44%), Positives = 104/177 (58%)
Query: 2 LLCTSFDTELVTAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENSPXXXXXXXXXXXXTK 61
LL + ++L F++VV S V KY+GE R++R++F A+++ P +
Sbjct: 182 LLARAVASQLDCNFLKVVSSSIVDKYIGESARLIREMFNYARDHQPCIIFMDEIDAIGGR 241
Query: 62 RFDAQTGADREVQRILLELLNQMDGFDQTTNVKVIMATNRADTLDPALLRPGRLDRKIEF 121
RF T ADRE+QR L+ELLNQMDGFD VK+IMATNR DTLDPALLRPGRLDRKI
Sbjct: 242 RFSEGTSADREIQRTLMELLNQMDGFDTLHRVKMIMATNRPDTLDPALLRPGRLDRKIHI 301
Query: 122 PLPDRRQKRLVFSTITAKMNLSDEVDLEDYVARPDRISGADINAICQEVIMATNRAD 178
LP+ + + + + E+D E V D +GAD+ +C E M RAD
Sbjct: 302 DLPNEQARLDILKIHAGPITKHGEIDYEAIVKLSDGFNGADLGNVCTEAGMFAIRAD 358
Score = 230 (86.0 bits), Expect = 2.7e-17, P = 2.7e-17
Identities = 50/127 (39%), Positives = 73/127 (57%)
Query: 200 DRRQKRLVFSTITAKMNFMLNIGNLQVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQ 259
DR +R + + +M+ + +++IMATNR DTLDPALLRPGRLDRKI LP+ +
Sbjct: 250 DREIQRTLMELLN-QMDGFDTLHRVKMIMATNRPDTLDPALLRPGRLDRKIHIDLPNEQA 308
Query: 260 KRLVFSTITAKMNLSDEVDLEDYVARPDRISGADINAICQEAGMHAVRENRYIVLPKDFE 319
+ + + E+D E V D +GAD+ +C EAGM A+R + V+ +DF
Sbjct: 309 RLDILKIHAGPITKHGEIDYEAIVKLSDGFNGADLGNVCTEAGMFAIRADHDFVVQEDFM 368
Query: 320 KGYKKCA 326
K +K A
Sbjct: 369 KAVRKVA 375
Score = 132 (51.5 bits), Expect = 3.4e-07, Sum P(2) = 3.4e-07
Identities = 28/38 (73%), Positives = 31/38 (81%)
Query: 169 EVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRL 206
++IMATNR DTLDPALLRPGRLDRKI LP+ Q RL
Sbjct: 274 KMIMATNRPDTLDPALLRPGRLDRKIHIDLPNE-QARL 310
Score = 53 (23.7 bits), Expect = 2.8e-38, Sum P(2) = 2.8e-38
Identities = 13/37 (35%), Positives = 23/37 (62%)
Query: 326 AGMHAVRENRYIVLPKDFEKGYKN--NTKKDESEHEF 360
AGM A+R + V+ +DF K + ++KK ES+ ++
Sbjct: 350 AGMFAIRADHDFVVQEDFMKAVRKVADSKKLESKLDY 386
>UNIPROTKB|J9P1N0 [details] [associations]
symbol:PSMC6 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0030163 "protein catabolic process" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005737 GO:GO:0030163
GO:GO:0017111 TIGRFAMs:TIGR01242 GeneTree:ENSGT00550000074826
OMA:EHKEVES EMBL:AAEX03016845 Ensembl:ENSCAFT00000019502
Uniprot:J9P1N0
Length = 395
Score = 373 (136.4 bits), Expect = 2.8e-38, Sum P(2) = 2.8e-38
Identities = 78/177 (44%), Positives = 104/177 (58%)
Query: 2 LLCTSFDTELVTAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENSPXXXXXXXXXXXXTK 61
LL + ++L F++VV S V KY+GE R++R++F A+++ P +
Sbjct: 188 LLARAVASQLDCNFLKVVSSSIVDKYIGESARLIREMFNYARDHQPCIIFMDEIDAIGGR 247
Query: 62 RFDAQTGADREVQRILLELLNQMDGFDQTTNVKVIMATNRADTLDPALLRPGRLDRKIEF 121
RF T ADRE+QR L+ELLNQMDGFD VK+IMATNR DTLDPALLRPGRLDRKI
Sbjct: 248 RFSEGTSADREIQRTLMELLNQMDGFDTLHRVKMIMATNRPDTLDPALLRPGRLDRKIHI 307
Query: 122 PLPDRRQKRLVFSTITAKMNLSDEVDLEDYVARPDRISGADINAICQEVIMATNRAD 178
LP+ + + + + E+D E V D +GAD+ +C E M RAD
Sbjct: 308 DLPNEQARLDILKIHAGPITKHGEIDYEAIVKLSDGFNGADLRNVCTEAGMFAIRAD 364
Score = 230 (86.0 bits), Expect = 3.0e-17, P = 3.0e-17
Identities = 50/127 (39%), Positives = 73/127 (57%)
Query: 200 DRRQKRLVFSTITAKMNFMLNIGNLQVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQ 259
DR +R + + +M+ + +++IMATNR DTLDPALLRPGRLDRKI LP+ +
Sbjct: 256 DREIQRTLMELLN-QMDGFDTLHRVKMIMATNRPDTLDPALLRPGRLDRKIHIDLPNEQA 314
Query: 260 KRLVFSTITAKMNLSDEVDLEDYVARPDRISGADINAICQEAGMHAVRENRYIVLPKDFE 319
+ + + E+D E V D +GAD+ +C EAGM A+R + V+ +DF
Sbjct: 315 RLDILKIHAGPITKHGEIDYEAIVKLSDGFNGADLRNVCTEAGMFAIRADHDFVVQEDFM 374
Query: 320 KGYKKCA 326
K +K A
Sbjct: 375 KAVRKVA 381
Score = 132 (51.5 bits), Expect = 3.6e-07, Sum P(2) = 3.6e-07
Identities = 28/38 (73%), Positives = 31/38 (81%)
Query: 169 EVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRL 206
++IMATNR DTLDPALLRPGRLDRKI LP+ Q RL
Sbjct: 280 KMIMATNRPDTLDPALLRPGRLDRKIHIDLPNE-QARL 316
Score = 53 (23.7 bits), Expect = 2.8e-38, Sum P(2) = 2.8e-38
Identities = 13/37 (35%), Positives = 23/37 (62%)
Query: 326 AGMHAVRENRYIVLPKDFEKGYKN--NTKKDESEHEF 360
AGM A+R + V+ +DF K + ++KK ES+ ++
Sbjct: 356 AGMFAIRADHDFVVQEDFMKAVRKVADSKKLESKLDY 392
>UNIPROTKB|P62333 [details] [associations]
symbol:PSMC6 "26S protease regulatory subunit 10B"
species:9606 "Homo sapiens" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0000502 "proteasome complex" evidence=IDA] [GO:0016887 "ATPase
activity" evidence=TAS] [GO:0005634 "nucleus" evidence=IDA]
[GO:0030674 "protein binding, bridging" evidence=NAS] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=IC]
[GO:0022624 "proteasome accessory complex" evidence=ISS]
[GO:0000075 "cell cycle checkpoint" evidence=TAS] [GO:0000082 "G1/S
transition of mitotic cell cycle" evidence=TAS] [GO:0000084 "S
phase of mitotic cell cycle" evidence=TAS] [GO:0000209 "protein
polyubiquitination" evidence=TAS] [GO:0000216 "M/G1 transition of
mitotic cell cycle" evidence=TAS] [GO:0000278 "mitotic cell cycle"
evidence=TAS] [GO:0002474 "antigen processing and presentation of
peptide antigen via MHC class I" evidence=TAS] [GO:0002479 "antigen
processing and presentation of exogenous peptide antigen via MHC
class I, TAP-dependent" evidence=TAS] [GO:0005654 "nucleoplasm"
evidence=TAS] [GO:0005829 "cytosol" evidence=TAS] [GO:0006521
"regulation of cellular amino acid metabolic process" evidence=TAS]
[GO:0006915 "apoptotic process" evidence=TAS] [GO:0006977 "DNA
damage response, signal transduction by p53 class mediator
resulting in cell cycle arrest" evidence=TAS] [GO:0010467 "gene
expression" evidence=TAS] [GO:0016032 "viral reproduction"
evidence=TAS] [GO:0016070 "RNA metabolic process" evidence=TAS]
[GO:0016071 "mRNA metabolic process" evidence=TAS] [GO:0031145
"anaphase-promoting complex-dependent proteasomal
ubiquitin-dependent protein catabolic process" evidence=TAS]
[GO:0034641 "cellular nitrogen compound metabolic process"
evidence=TAS] [GO:0042590 "antigen processing and presentation of
exogenous peptide antigen via MHC class I" evidence=TAS]
[GO:0042981 "regulation of apoptotic process" evidence=TAS]
[GO:0044281 "small molecule metabolic process" evidence=TAS]
[GO:0051436 "negative regulation of ubiquitin-protein ligase
activity involved in mitotic cell cycle" evidence=TAS] [GO:0051437
"positive regulation of ubiquitin-protein ligase activity involved
in mitotic cell cycle" evidence=TAS] [GO:0051439 "regulation of
ubiquitin-protein ligase activity involved in mitotic cell cycle"
evidence=TAS] [GO:0005515 "protein binding" evidence=IPI]
[GO:0006200 "ATP catabolic process" evidence=TAS] [GO:0005730
"nucleolus" evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA]
[GO:0005886 "plasma membrane" evidence=IDA] Reactome:REACT_13505
Reactome:REACT_578 Reactome:REACT_71 Reactome:REACT_21257
Reactome:REACT_6850 Reactome:REACT_111217 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005829
GO:GO:0005886 GO:GO:0005524 Reactome:REACT_111102
Reactome:REACT_116125 Reactome:REACT_6900 GO:GO:0006915
GO:GO:0010467 GO:GO:0016071 Reactome:REACT_115566 GO:GO:0005654
GO:GO:0002479 GO:GO:0016032 Reactome:REACT_21300 GO:GO:0006977
GO:GO:0042981 GO:GO:0000082 GO:GO:0030674 GO:GO:0016887
EMBL:CH471078 GO:GO:0051436 GO:GO:0000216 GO:GO:0000209
GO:GO:0000084 GO:GO:0031145 GO:GO:0051437 GO:GO:0006521
Reactome:REACT_383 KO:K03064 eggNOG:COG1222 TIGRFAMs:TIGR01242
HOVERGEN:HBG000109 GO:GO:0022624 CTD:5706 HOGENOM:HOG000225143
OrthoDB:EOG408N84 EMBL:D78275 EMBL:AF006305 EMBL:BT006843
EMBL:CR456709 EMBL:AK313670 EMBL:BC005390 IPI:IPI00926977
PIR:S71316 RefSeq:NP_002797.3 UniGene:Hs.156171
ProteinModelPortal:P62333 SMR:P62333 DIP:DIP-38150N IntAct:P62333
MINT:MINT-5001174 STRING:P62333 PhosphoSite:P62333 DMDM:51702772
REPRODUCTION-2DPAGE:IPI00021926 PaxDb:P62333 PeptideAtlas:P62333
PRIDE:P62333 DNASU:5706 Ensembl:ENST00000445930 GeneID:5706
KEGG:hsa:5706 UCSC:uc010tqx.2 GeneCards:GC14P053173
H-InvDB:HIX0011661 HGNC:HGNC:9553 HPA:HPA042823 MIM:602708
neXtProt:NX_P62333 PharmGKB:PA33898 InParanoid:P62333
PhylomeDB:P62333 GenomeRNAi:5706 NextBio:22170 Bgee:P62333
CleanEx:HS_PSMC6 Genevestigator:P62333 GermOnline:ENSG00000100519
Uniprot:P62333
Length = 389
Score = 373 (136.4 bits), Expect = 2.8e-38, Sum P(2) = 2.8e-38
Identities = 78/177 (44%), Positives = 104/177 (58%)
Query: 2 LLCTSFDTELVTAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENSPXXXXXXXXXXXXTK 61
LL + ++L F++VV S V KY+GE R++R++F A+++ P +
Sbjct: 182 LLARAVASQLDCNFLKVVSSSIVDKYIGESARLIREMFNYARDHQPCIIFMDEIDAIGGR 241
Query: 62 RFDAQTGADREVQRILLELLNQMDGFDQTTNVKVIMATNRADTLDPALLRPGRLDRKIEF 121
RF T ADRE+QR L+ELLNQMDGFD VK+IMATNR DTLDPALLRPGRLDRKI
Sbjct: 242 RFSEGTSADREIQRTLMELLNQMDGFDTLHRVKMIMATNRPDTLDPALLRPGRLDRKIHI 301
Query: 122 PLPDRRQKRLVFSTITAKMNLSDEVDLEDYVARPDRISGADINAICQEVIMATNRAD 178
LP+ + + + + E+D E V D +GAD+ +C E M RAD
Sbjct: 302 DLPNEQARLDILKIHAGPITKHGEIDYEAIVKLSDGFNGADLRNVCTEAGMFAIRAD 358
Score = 230 (86.0 bits), Expect = 2.7e-17, P = 2.7e-17
Identities = 50/127 (39%), Positives = 73/127 (57%)
Query: 200 DRRQKRLVFSTITAKMNFMLNIGNLQVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQ 259
DR +R + + +M+ + +++IMATNR DTLDPALLRPGRLDRKI LP+ +
Sbjct: 250 DREIQRTLMELLN-QMDGFDTLHRVKMIMATNRPDTLDPALLRPGRLDRKIHIDLPNEQA 308
Query: 260 KRLVFSTITAKMNLSDEVDLEDYVARPDRISGADINAICQEAGMHAVRENRYIVLPKDFE 319
+ + + E+D E V D +GAD+ +C EAGM A+R + V+ +DF
Sbjct: 309 RLDILKIHAGPITKHGEIDYEAIVKLSDGFNGADLRNVCTEAGMFAIRADHDFVVQEDFM 368
Query: 320 KGYKKCA 326
K +K A
Sbjct: 369 KAVRKVA 375
Score = 132 (51.5 bits), Expect = 3.4e-07, Sum P(2) = 3.4e-07
Identities = 28/38 (73%), Positives = 31/38 (81%)
Query: 169 EVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRL 206
++IMATNR DTLDPALLRPGRLDRKI LP+ Q RL
Sbjct: 274 KMIMATNRPDTLDPALLRPGRLDRKIHIDLPNE-QARL 310
Score = 53 (23.7 bits), Expect = 2.8e-38, Sum P(2) = 2.8e-38
Identities = 13/37 (35%), Positives = 23/37 (62%)
Query: 326 AGMHAVRENRYIVLPKDFEKGYKN--NTKKDESEHEF 360
AGM A+R + V+ +DF K + ++KK ES+ ++
Sbjct: 350 AGMFAIRADHDFVVQEDFMKAVRKVADSKKLESKLDY 386
>UNIPROTKB|F1SFE6 [details] [associations]
symbol:PSMC6 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0022624 "proteasome accessory complex" evidence=IEA]
[GO:0005886 "plasma membrane" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737
GO:GO:0030163 GO:GO:0000502 GO:GO:0017111 KO:K03064
TIGRFAMs:TIGR01242 CTD:5706 GeneTree:ENSGT00550000074826
OMA:EHKEVES EMBL:CU407115 RefSeq:XP_001928782.2 UniGene:Ssc.51323
Ensembl:ENSSSCT00000005554 GeneID:100154148 KEGG:ssc:100154148
ArrayExpress:F1SFE6 Uniprot:F1SFE6
Length = 403
Score = 373 (136.4 bits), Expect = 2.8e-38, Sum P(2) = 2.8e-38
Identities = 78/177 (44%), Positives = 104/177 (58%)
Query: 2 LLCTSFDTELVTAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENSPXXXXXXXXXXXXTK 61
LL + ++L F++VV S V KY+GE R++R++F A+++ P +
Sbjct: 196 LLARAVASQLDCNFLKVVSSSIVDKYIGESARLIREMFNYARDHQPCIIFMDEIDAIGGR 255
Query: 62 RFDAQTGADREVQRILLELLNQMDGFDQTTNVKVIMATNRADTLDPALLRPGRLDRKIEF 121
RF T ADRE+QR L+ELLNQMDGFD VK+IMATNR DTLDPALLRPGRLDRKI
Sbjct: 256 RFSEGTSADREIQRTLMELLNQMDGFDTLHRVKMIMATNRPDTLDPALLRPGRLDRKIHI 315
Query: 122 PLPDRRQKRLVFSTITAKMNLSDEVDLEDYVARPDRISGADINAICQEVIMATNRAD 178
LP+ + + + + E+D E V D +GAD+ +C E M RAD
Sbjct: 316 DLPNEQARLDILKIHAGPITKHGEIDYEAIVKLSDGFNGADLRNVCTEAGMFAIRAD 372
Score = 230 (86.0 bits), Expect = 3.2e-17, P = 3.2e-17
Identities = 50/127 (39%), Positives = 73/127 (57%)
Query: 200 DRRQKRLVFSTITAKMNFMLNIGNLQVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQ 259
DR +R + + +M+ + +++IMATNR DTLDPALLRPGRLDRKI LP+ +
Sbjct: 264 DREIQRTLMELLN-QMDGFDTLHRVKMIMATNRPDTLDPALLRPGRLDRKIHIDLPNEQA 322
Query: 260 KRLVFSTITAKMNLSDEVDLEDYVARPDRISGADINAICQEAGMHAVRENRYIVLPKDFE 319
+ + + E+D E V D +GAD+ +C EAGM A+R + V+ +DF
Sbjct: 323 RLDILKIHAGPITKHGEIDYEAIVKLSDGFNGADLRNVCTEAGMFAIRADHDFVVQEDFM 382
Query: 320 KGYKKCA 326
K +K A
Sbjct: 383 KAVRKVA 389
Score = 132 (51.5 bits), Expect = 3.8e-07, Sum P(2) = 3.8e-07
Identities = 28/38 (73%), Positives = 31/38 (81%)
Query: 169 EVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRL 206
++IMATNR DTLDPALLRPGRLDRKI LP+ Q RL
Sbjct: 288 KMIMATNRPDTLDPALLRPGRLDRKIHIDLPNE-QARL 324
Score = 53 (23.7 bits), Expect = 2.8e-38, Sum P(2) = 2.8e-38
Identities = 13/37 (35%), Positives = 23/37 (62%)
Query: 326 AGMHAVRENRYIVLPKDFEKGYKN--NTKKDESEHEF 360
AGM A+R + V+ +DF K + ++KK ES+ ++
Sbjct: 364 AGMFAIRADHDFVVQEDFMKAVRKVADSKKLESKLDY 400
>UNIPROTKB|P62335 [details] [associations]
symbol:PSMC6 "26S protease regulatory subunit 10B"
species:43179 "Spermophilus tridecemlineatus" [GO:0022624
"proteasome accessory complex" evidence=ISS] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GO:GO:0005634 GO:GO:0005737 GO:GO:0030163 GO:GO:0017111
TIGRFAMs:TIGR01242 HOVERGEN:HBG000109 GO:GO:0022624
HOGENOM:HOG000225143 OrthoDB:EOG408N84 GeneTree:ENSGT00550000074826
OMA:EHKEVES EMBL:U36395 PIR:JC5349 ProteinModelPortal:P62335
SMR:P62335 PRIDE:P62335 Ensembl:ENSSTOT00000014492 Uniprot:P62335
Length = 389
Score = 373 (136.4 bits), Expect = 2.8e-38, Sum P(2) = 2.8e-38
Identities = 78/177 (44%), Positives = 104/177 (58%)
Query: 2 LLCTSFDTELVTAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENSPXXXXXXXXXXXXTK 61
LL + ++L F++VV S V KY+GE R++R++F A+++ P +
Sbjct: 182 LLARAVASQLDCNFLKVVSSSIVDKYIGESARLIREMFNYARDHQPCIIFMDEIDAIGGR 241
Query: 62 RFDAQTGADREVQRILLELLNQMDGFDQTTNVKVIMATNRADTLDPALLRPGRLDRKIEF 121
RF T ADRE+QR L+ELLNQMDGFD VK+IMATNR DTLDPALLRPGRLDRKI
Sbjct: 242 RFSEGTSADREIQRTLMELLNQMDGFDTLHRVKMIMATNRPDTLDPALLRPGRLDRKIHI 301
Query: 122 PLPDRRQKRLVFSTITAKMNLSDEVDLEDYVARPDRISGADINAICQEVIMATNRAD 178
LP+ + + + + E+D E V D +GAD+ +C E M RAD
Sbjct: 302 DLPNEQARLDILKIHAGPITKHGEIDYEAIVKLSDGFNGADLRNVCTEAGMFAIRAD 358
Score = 230 (86.0 bits), Expect = 2.7e-17, P = 2.7e-17
Identities = 50/127 (39%), Positives = 73/127 (57%)
Query: 200 DRRQKRLVFSTITAKMNFMLNIGNLQVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQ 259
DR +R + + +M+ + +++IMATNR DTLDPALLRPGRLDRKI LP+ +
Sbjct: 250 DREIQRTLMELLN-QMDGFDTLHRVKMIMATNRPDTLDPALLRPGRLDRKIHIDLPNEQA 308
Query: 260 KRLVFSTITAKMNLSDEVDLEDYVARPDRISGADINAICQEAGMHAVRENRYIVLPKDFE 319
+ + + E+D E V D +GAD+ +C EAGM A+R + V+ +DF
Sbjct: 309 RLDILKIHAGPITKHGEIDYEAIVKLSDGFNGADLRNVCTEAGMFAIRADHDFVVQEDFM 368
Query: 320 KGYKKCA 326
K +K A
Sbjct: 369 KAVRKVA 375
Score = 132 (51.5 bits), Expect = 3.4e-07, Sum P(2) = 3.4e-07
Identities = 28/38 (73%), Positives = 31/38 (81%)
Query: 169 EVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRL 206
++IMATNR DTLDPALLRPGRLDRKI LP+ Q RL
Sbjct: 274 KMIMATNRPDTLDPALLRPGRLDRKIHIDLPNE-QARL 310
Score = 53 (23.7 bits), Expect = 2.8e-38, Sum P(2) = 2.8e-38
Identities = 13/37 (35%), Positives = 23/37 (62%)
Query: 326 AGMHAVRENRYIVLPKDFEKGYKN--NTKKDESEHEF 360
AGM A+R + V+ +DF K + ++KK ES+ ++
Sbjct: 350 AGMFAIRADHDFVVQEDFMKAVRKVADSKKLESKLDY 386
>MGI|MGI:1914339 [details] [associations]
symbol:Psmc6 "proteasome (prosome, macropain) 26S subunit,
ATPase, 6" species:10090 "Mus musculus" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0000502 "proteasome complex"
evidence=ISO] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=ISO] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0022624
"proteasome accessory complex" evidence=IDA] [GO:0030163 "protein
catabolic process" evidence=IEA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 MGI:MGI:1914339
GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0030163
GO:GO:0017111 KO:K03064 eggNOG:COG1222 TIGRFAMs:TIGR01242
HOVERGEN:HBG000109 GO:GO:0022624 CTD:5706 HOGENOM:HOG000225143
OrthoDB:EOG408N84 OMA:EHKEVES EMBL:AK012174 EMBL:AK014354
EMBL:AK144728 EMBL:AK166961 EMBL:BC043044 EMBL:BC057997
IPI:IPI00125971 RefSeq:NP_080235.2 UniGene:Mm.18472
ProteinModelPortal:P62334 SMR:P62334 IntAct:P62334 STRING:P62334
PhosphoSite:P62334 REPRODUCTION-2DPAGE:IPI00125971
REPRODUCTION-2DPAGE:P62334 PaxDb:P62334 PRIDE:P62334
Ensembl:ENSMUST00000022380 GeneID:67089 KEGG:mmu:67089
InParanoid:P62334 NextBio:323546 Bgee:P62334 Genevestigator:P62334
GermOnline:ENSMUSG00000021832 Uniprot:P62334
Length = 389
Score = 373 (136.4 bits), Expect = 2.8e-38, Sum P(2) = 2.8e-38
Identities = 78/177 (44%), Positives = 104/177 (58%)
Query: 2 LLCTSFDTELVTAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENSPXXXXXXXXXXXXTK 61
LL + ++L F++VV S V KY+GE R++R++F A+++ P +
Sbjct: 182 LLARAVASQLDCNFLKVVSSSIVDKYIGESARLIREMFNYARDHQPCIIFMDEIDAIGGR 241
Query: 62 RFDAQTGADREVQRILLELLNQMDGFDQTTNVKVIMATNRADTLDPALLRPGRLDRKIEF 121
RF T ADRE+QR L+ELLNQMDGFD VK+IMATNR DTLDPALLRPGRLDRKI
Sbjct: 242 RFSEGTSADREIQRTLMELLNQMDGFDTLHRVKMIMATNRPDTLDPALLRPGRLDRKIHI 301
Query: 122 PLPDRRQKRLVFSTITAKMNLSDEVDLEDYVARPDRISGADINAICQEVIMATNRAD 178
LP+ + + + + E+D E V D +GAD+ +C E M RAD
Sbjct: 302 DLPNEQARLDILKIHAGPITKHGEIDYEAIVKLSDGFNGADLRNVCTEAGMFAIRAD 358
Score = 230 (86.0 bits), Expect = 2.7e-17, P = 2.7e-17
Identities = 50/127 (39%), Positives = 73/127 (57%)
Query: 200 DRRQKRLVFSTITAKMNFMLNIGNLQVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQ 259
DR +R + + +M+ + +++IMATNR DTLDPALLRPGRLDRKI LP+ +
Sbjct: 250 DREIQRTLMELLN-QMDGFDTLHRVKMIMATNRPDTLDPALLRPGRLDRKIHIDLPNEQA 308
Query: 260 KRLVFSTITAKMNLSDEVDLEDYVARPDRISGADINAICQEAGMHAVRENRYIVLPKDFE 319
+ + + E+D E V D +GAD+ +C EAGM A+R + V+ +DF
Sbjct: 309 RLDILKIHAGPITKHGEIDYEAIVKLSDGFNGADLRNVCTEAGMFAIRADHDFVVQEDFM 368
Query: 320 KGYKKCA 326
K +K A
Sbjct: 369 KAVRKVA 375
Score = 132 (51.5 bits), Expect = 3.4e-07, Sum P(2) = 3.4e-07
Identities = 28/38 (73%), Positives = 31/38 (81%)
Query: 169 EVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRL 206
++IMATNR DTLDPALLRPGRLDRKI LP+ Q RL
Sbjct: 274 KMIMATNRPDTLDPALLRPGRLDRKIHIDLPNE-QARL 310
Score = 53 (23.7 bits), Expect = 2.8e-38, Sum P(2) = 2.8e-38
Identities = 13/37 (35%), Positives = 23/37 (62%)
Query: 326 AGMHAVRENRYIVLPKDFEKGYKN--NTKKDESEHEF 360
AGM A+R + V+ +DF K + ++KK ES+ ++
Sbjct: 350 AGMFAIRADHDFVVQEDFMKAVRKVADSKKLESKLDY 386
>RGD|1308825 [details] [associations]
symbol:Psmc6 "proteasome (prosome, macropain) 26S subunit,
ATPase, 6" species:10116 "Rattus norvegicus" [GO:0000502
"proteasome complex" evidence=ISO] [GO:0005634 "nucleus"
evidence=ISO] [GO:0005737 "cytoplasm" evidence=ISO] [GO:0005886
"plasma membrane" evidence=ISO] [GO:0022624 "proteasome accessory
complex" evidence=ISO] [GO:0005730 "nucleolus" evidence=ISO]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
RGD:1308825 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0030163
GO:GO:0000502 GO:GO:0017111 KO:K03064 eggNOG:COG1222
TIGRFAMs:TIGR01242 HOVERGEN:HBG000109 CTD:5706 HOGENOM:HOG000225143
OrthoDB:EOG408N84 RefSeq:NP_001093979.1 UniGene:Rn.103233
GeneID:289990 KEGG:rno:289990 NextBio:630545 EMBL:BC107950
IPI:IPI00362105 ProteinModelPortal:Q32PW9 IntAct:Q32PW9
STRING:Q32PW9 PhosphoSite:Q32PW9 PRIDE:Q32PW9 UCSC:RGD:1308825
InParanoid:Q32PW9 ArrayExpress:Q32PW9 Genevestigator:Q32PW9
Uniprot:Q32PW9
Length = 381
Score = 373 (136.4 bits), Expect = 2.8e-38, Sum P(2) = 2.8e-38
Identities = 78/177 (44%), Positives = 104/177 (58%)
Query: 2 LLCTSFDTELVTAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENSPXXXXXXXXXXXXTK 61
LL + ++L F++VV S V KY+GE R++R++F A+++ P +
Sbjct: 174 LLARAVASQLDCNFLKVVSSSIVDKYIGESARLIREMFNYARDHQPCIIFMDEIDAIGGR 233
Query: 62 RFDAQTGADREVQRILLELLNQMDGFDQTTNVKVIMATNRADTLDPALLRPGRLDRKIEF 121
RF T ADRE+QR L+ELLNQMDGFD VK+IMATNR DTLDPALLRPGRLDRKI
Sbjct: 234 RFSEGTSADREIQRTLMELLNQMDGFDTLHRVKMIMATNRPDTLDPALLRPGRLDRKIHI 293
Query: 122 PLPDRRQKRLVFSTITAKMNLSDEVDLEDYVARPDRISGADINAICQEVIMATNRAD 178
LP+ + + + + E+D E V D +GAD+ +C E M RAD
Sbjct: 294 DLPNEQARLDILKIHAGPITKHGEIDYEAIVKLSDGFNGADLRNVCTEAGMFAIRAD 350
Score = 230 (86.0 bits), Expect = 2.5e-17, P = 2.5e-17
Identities = 50/127 (39%), Positives = 73/127 (57%)
Query: 200 DRRQKRLVFSTITAKMNFMLNIGNLQVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQ 259
DR +R + + +M+ + +++IMATNR DTLDPALLRPGRLDRKI LP+ +
Sbjct: 242 DREIQRTLMELLN-QMDGFDTLHRVKMIMATNRPDTLDPALLRPGRLDRKIHIDLPNEQA 300
Query: 260 KRLVFSTITAKMNLSDEVDLEDYVARPDRISGADINAICQEAGMHAVRENRYIVLPKDFE 319
+ + + E+D E V D +GAD+ +C EAGM A+R + V+ +DF
Sbjct: 301 RLDILKIHAGPITKHGEIDYEAIVKLSDGFNGADLRNVCTEAGMFAIRADHDFVVQEDFM 360
Query: 320 KGYKKCA 326
K +K A
Sbjct: 361 KAVRKVA 367
Score = 132 (51.5 bits), Expect = 3.1e-07, Sum P(2) = 3.1e-07
Identities = 28/38 (73%), Positives = 31/38 (81%)
Query: 169 EVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRL 206
++IMATNR DTLDPALLRPGRLDRKI LP+ Q RL
Sbjct: 266 KMIMATNRPDTLDPALLRPGRLDRKIHIDLPNE-QARL 302
Score = 53 (23.7 bits), Expect = 2.8e-38, Sum P(2) = 2.8e-38
Identities = 13/37 (35%), Positives = 23/37 (62%)
Query: 326 AGMHAVRENRYIVLPKDFEKGYKN--NTKKDESEHEF 360
AGM A+R + V+ +DF K + ++KK ES+ ++
Sbjct: 342 AGMFAIRADHDFVVQEDFMKAVRKVADSKKLESKLDY 378
>RGD|2318218 [details] [associations]
symbol:LOC100365869 "proteasome (prosome, macropain) 26S
subunit, ATPase, 6-like" species:10116 "Rattus norvegicus"
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005886
"plasma membrane" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0022624
"proteasome accessory complex" evidence=IEA] [GO:0030163 "protein
catabolic process" evidence=IEA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 RGD:2318218
GO:GO:0005524 GO:GO:0005737 GO:GO:0030163 GO:GO:0017111
EMBL:CH474040 KO:K03064 TIGRFAMs:TIGR01242 CTD:5706
GeneTree:ENSGT00550000074826 RefSeq:NP_001093979.1
UniGene:Rn.103233 Ensembl:ENSRNOT00000009649 GeneID:289990
KEGG:rno:289990 NextBio:630545 Uniprot:G3V6W6
Length = 403
Score = 373 (136.4 bits), Expect = 2.8e-38, Sum P(2) = 2.8e-38
Identities = 78/177 (44%), Positives = 104/177 (58%)
Query: 2 LLCTSFDTELVTAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENSPXXXXXXXXXXXXTK 61
LL + ++L F++VV S V KY+GE R++R++F A+++ P +
Sbjct: 196 LLARAVASQLDCNFLKVVSSSIVDKYIGESARLIREMFNYARDHQPCIIFMDEIDAIGGR 255
Query: 62 RFDAQTGADREVQRILLELLNQMDGFDQTTNVKVIMATNRADTLDPALLRPGRLDRKIEF 121
RF T ADRE+QR L+ELLNQMDGFD VK+IMATNR DTLDPALLRPGRLDRKI
Sbjct: 256 RFSEGTSADREIQRTLMELLNQMDGFDTLHRVKMIMATNRPDTLDPALLRPGRLDRKIHI 315
Query: 122 PLPDRRQKRLVFSTITAKMNLSDEVDLEDYVARPDRISGADINAICQEVIMATNRAD 178
LP+ + + + + E+D E V D +GAD+ +C E M RAD
Sbjct: 316 DLPNEQARLDILKIHAGPITKHGEIDYEAIVKLSDGFNGADLRNVCTEAGMFAIRAD 372
Score = 230 (86.0 bits), Expect = 3.2e-17, P = 3.2e-17
Identities = 50/127 (39%), Positives = 73/127 (57%)
Query: 200 DRRQKRLVFSTITAKMNFMLNIGNLQVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQ 259
DR +R + + +M+ + +++IMATNR DTLDPALLRPGRLDRKI LP+ +
Sbjct: 264 DREIQRTLMELLN-QMDGFDTLHRVKMIMATNRPDTLDPALLRPGRLDRKIHIDLPNEQA 322
Query: 260 KRLVFSTITAKMNLSDEVDLEDYVARPDRISGADINAICQEAGMHAVRENRYIVLPKDFE 319
+ + + E+D E V D +GAD+ +C EAGM A+R + V+ +DF
Sbjct: 323 RLDILKIHAGPITKHGEIDYEAIVKLSDGFNGADLRNVCTEAGMFAIRADHDFVVQEDFM 382
Query: 320 KGYKKCA 326
K +K A
Sbjct: 383 KAVRKVA 389
Score = 132 (51.5 bits), Expect = 3.8e-07, Sum P(2) = 3.8e-07
Identities = 28/38 (73%), Positives = 31/38 (81%)
Query: 169 EVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRL 206
++IMATNR DTLDPALLRPGRLDRKI LP+ Q RL
Sbjct: 288 KMIMATNRPDTLDPALLRPGRLDRKIHIDLPNE-QARL 324
Score = 53 (23.7 bits), Expect = 2.8e-38, Sum P(2) = 2.8e-38
Identities = 13/37 (35%), Positives = 23/37 (62%)
Query: 326 AGMHAVRENRYIVLPKDFEKGYKN--NTKKDESEHEF 360
AGM A+R + V+ +DF K + ++KK ES+ ++
Sbjct: 364 AGMFAIRADHDFVVQEDFMKAVRKVADSKKLESKLDY 400
>DICTYBASE|DDB_G0284517 [details] [associations]
symbol:psmC6 "26S protease regulatory subunit S10B"
species:44689 "Dictyostelium discoideum" [GO:0030163 "protein
catabolic process" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0000502 "proteasome complex" evidence=IEA]
[GO:0044351 "macropinocytosis" evidence=RCA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 dictyBase:DDB_G0284517
GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GenomeReviews:CM000153_GR
GO:GO:0030163 GO:GO:0000502 HSSP:Q01853 GO:GO:0017111
EMBL:AAFI02000066 KO:K03064 eggNOG:COG1222 TIGRFAMs:TIGR01242
RefSeq:XP_638541.1 ProteinModelPortal:Q54PJ1 STRING:Q54PJ1
EnsemblProtists:DDB0232968 GeneID:8624634 KEGG:ddi:DDB_G0284517
OMA:HAANITK ProtClustDB:CLSZ2429012 Uniprot:Q54PJ1
Length = 393
Score = 369 (135.0 bits), Expect = 4.5e-38, Sum P(2) = 4.5e-38
Identities = 78/177 (44%), Positives = 103/177 (58%)
Query: 2 LLCTSFDTELVTAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENSPXXXXXXXXXXXXTK 61
LL + + L F++VV S V KY+GE R++R++F A+++ P +
Sbjct: 186 LLARAIASNLEANFLKVVSSAIVDKYIGESARVIREMFGYARDHQPCVIFMDEIDAIGGR 245
Query: 62 RFDAQTGADREVQRILLELLNQMDGFDQTTNVKVIMATNRADTLDPALLRPGRLDRKIEF 121
RF T ADRE+QR L+ELLNQMDGFD + VK+IMATNR D LDPALLRPGRLDRKIE
Sbjct: 246 RFSEGTSADREIQRTLMELLNQMDGFDTLSKVKIIMATNRPDVLDPALLRPGRLDRKIEI 305
Query: 122 PLPDRRQKRLVFSTITAKMNLSDEVDLEDYVARPDRISGADINAICQEVIMATNRAD 178
PLP+ + V A + +VD E D + AD+ +C E M RA+
Sbjct: 306 PLPNEAGRVDVLKIHAANITKHGDVDYEAIAKLADGFNAADLRNVCTEAGMFAIRAE 362
Score = 242 (90.2 bits), Expect = 6.7e-19, P = 6.7e-19
Identities = 52/126 (41%), Positives = 72/126 (57%)
Query: 200 DRRQKRLVFSTITAKMNFMLNIGNLQVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQ 259
DR +R + + +M+ + +++IMATNR D LDPALLRPGRLDRKIE PLP+
Sbjct: 254 DREIQRTLMELLN-QMDGFDTLSKVKIIMATNRPDVLDPALLRPGRLDRKIEIPLPNEAG 312
Query: 260 KRLVFSTITAKMNLSDEVDLEDYVARPDRISGADINAICQEAGMHAVRENRYIVLPKDFE 319
+ V A + +VD E D + AD+ +C EAGM A+R R V+ +DF
Sbjct: 313 RVDVLKIHAANITKHGDVDYEAIAKLADGFNAADLRNVCTEAGMFAIRAERDYVMEEDFM 372
Query: 320 KGYKKC 325
K +KC
Sbjct: 373 KAVRKC 378
Score = 138 (53.6 bits), Expect = 4.4e-08, Sum P(2) = 4.4e-08
Identities = 26/32 (81%), Positives = 29/32 (90%)
Query: 169 EVIMATNRADTLDPALLRPGRLDRKIEFPLPD 200
++IMATNR D LDPALLRPGRLDRKIE PLP+
Sbjct: 278 KIIMATNRPDVLDPALLRPGRLDRKIEIPLPN 309
Score = 55 (24.4 bits), Expect = 4.5e-38, Sum P(2) = 4.5e-38
Identities = 14/39 (35%), Positives = 21/39 (53%)
Query: 326 AGMHAVRENRYIVLPKDFEKGYKN--NTKKDESEHEFYK 362
AGM A+R R V+ +DF K + KK E + ++ K
Sbjct: 354 AGMFAIRAERDYVMEEDFMKAVRKCQEAKKLEGKLDYQK 392
>ZFIN|ZDB-GENE-030131-304 [details] [associations]
symbol:psmc6 "proteasome (prosome, macropain) 26S
subunit, ATPase, 6" species:7955 "Danio rerio" [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0000502 "proteasome complex" evidence=IEA]
[GO:0006508 "proteolysis" evidence=IEA] [GO:0008233 "peptidase
activity" evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 ZFIN:ZDB-GENE-030131-304 GO:GO:0005524 GO:GO:0005737
GO:GO:0006508 GO:GO:0030163 GO:GO:0000502 GO:GO:0017111
GO:GO:0008233 KO:K03064 eggNOG:COG1222 TIGRFAMs:TIGR01242
HOVERGEN:HBG000109 CTD:5706 HOGENOM:HOG000225143
GeneTree:ENSGT00550000074826 OMA:NAPFDPE EMBL:BX936454
EMBL:AL954679 EMBL:BC083283 EMBL:BC152260 EMBL:BC155769
EMBL:AY648827 IPI:IPI00507865 RefSeq:NP_001003832.1
UniGene:Dr.32860 STRING:Q6DRD2 Ensembl:ENSDART00000053834
GeneID:321585 KEGG:dre:321585 InParanoid:Q6DRD2 NextBio:20807435
Uniprot:Q6DRD2
Length = 389
Score = 371 (135.7 bits), Expect = 7.3e-38, Sum P(2) = 7.3e-38
Identities = 77/177 (43%), Positives = 105/177 (59%)
Query: 2 LLCTSFDTELVTAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENSPXXXXXXXXXXXXTK 61
LL + ++L F++VV S V KY+GE R++R++F A+++ P +
Sbjct: 182 LLARAVASQLDCNFLKVVSSSIVDKYIGESARLIREMFNYARDHQPCIIFMDEIDAIGGR 241
Query: 62 RFDAQTGADREVQRILLELLNQMDGFDQTTNVKVIMATNRADTLDPALLRPGRLDRKIEF 121
RF T ADRE+QR L+ELLNQMDGFD VK+IMATNR DTLDPALLRPGRLDRKI
Sbjct: 242 RFSEGTSADREIQRTLMELLNQMDGFDTLHRVKMIMATNRPDTLDPALLRPGRLDRKIHI 301
Query: 122 PLPDRRQKRLVFSTITAKMNLSDEVDLEDYVARPDRISGADINAICQEVIMATNRAD 178
LP+ + + + + + ++D E V D +GAD+ +C E M RAD
Sbjct: 302 ELPNEQARLDILKIHSGPITKHGDIDYEAIVKLSDGFNGADLRNVCTEAGMFAIRAD 358
Score = 226 (84.6 bits), Expect = 8.8e-17, P = 8.8e-17
Identities = 49/127 (38%), Positives = 73/127 (57%)
Query: 200 DRRQKRLVFSTITAKMNFMLNIGNLQVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQ 259
DR +R + + +M+ + +++IMATNR DTLDPALLRPGRLDRKI LP+ +
Sbjct: 250 DREIQRTLMELLN-QMDGFDTLHRVKMIMATNRPDTLDPALLRPGRLDRKIHIELPNEQA 308
Query: 260 KRLVFSTITAKMNLSDEVDLEDYVARPDRISGADINAICQEAGMHAVRENRYIVLPKDFE 319
+ + + + ++D E V D +GAD+ +C EAGM A+R + V +DF
Sbjct: 309 RLDILKIHSGPITKHGDIDYEAIVKLSDGFNGADLRNVCTEAGMFAIRADHEYVTQEDFM 368
Query: 320 KGYKKCA 326
K +K A
Sbjct: 369 KAVRKVA 375
Score = 132 (51.5 bits), Expect = 5.4e-07, Sum P(2) = 5.4e-07
Identities = 28/38 (73%), Positives = 31/38 (81%)
Query: 169 EVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRL 206
++IMATNR DTLDPALLRPGRLDRKI LP+ Q RL
Sbjct: 274 KMIMATNRPDTLDPALLRPGRLDRKIHIELPNE-QARL 310
Score = 51 (23.0 bits), Expect = 7.3e-38, Sum P(2) = 7.3e-38
Identities = 13/37 (35%), Positives = 22/37 (59%)
Query: 326 AGMHAVRENRYIVLPKDFEKGYKN--NTKKDESEHEF 360
AGM A+R + V +DF K + ++KK ES+ ++
Sbjct: 350 AGMFAIRADHEYVTQEDFMKAVRKVADSKKLESKLDY 386
>WB|WBGene00004501 [details] [associations]
symbol:rpt-1 species:6239 "Caenorhabditis elegans"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0030163 "protein
catabolic process" evidence=IEA] [GO:0009792 "embryo development
ending in birth or egg hatching" evidence=IMP] [GO:0000003
"reproduction" evidence=IMP] [GO:0002119 "nematode larval
development" evidence=IMP] [GO:0008340 "determination of adult
lifespan" evidence=IMP] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005634 GO:GO:0008340
GO:GO:0009792 GO:GO:0005737 GO:GO:0002119 GO:GO:0000003
GO:GO:0016887 GO:GO:0000502 GO:GO:0006511 EMBL:Z78012
eggNOG:COG1222 TIGRFAMs:TIGR01242 HOGENOM:HOG000225143 KO:K03061
OMA:DIRWELI GeneTree:ENSGT00550000074978 PIR:T20152
RefSeq:NP_506005.1 ProteinModelPortal:Q18787 SMR:Q18787
IntAct:Q18787 MINT:MINT-212537 STRING:Q18787 PaxDb:Q18787
PRIDE:Q18787 EnsemblMetazoa:C52E4.4.1 EnsemblMetazoa:C52E4.4.2
GeneID:179641 KEGG:cel:CELE_C52E4.4 UCSC:C52E4.4.1 CTD:179641
WormBase:C52E4.4 InParanoid:Q18787 NextBio:906264 Uniprot:Q18787
Length = 435
Score = 375 (137.1 bits), Expect = 9.3e-38, Sum P(2) = 9.3e-38
Identities = 84/166 (50%), Positives = 107/166 (64%)
Query: 15 FIRVVGSEFVQKYLGEGPRMVRDVFRLAKENSPXXXXXXXXXXXXTKRFDAQTGADREVQ 74
FIRV+GSE VQKY+GEG RMVR++F +A+ RFD G D EVQ
Sbjct: 239 FIRVIGSELVQKYVGEGARMVRELFEMARTKKACLIFFDEIDAVGGARFDDGQGGDNEVQ 298
Query: 75 RILLELLNQMDGFDQTTNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLVFS 134
R +LEL+NQ+DGFD N+KV+MATNR DTLDPAL+RPGRLDRK+EF LPD + +
Sbjct: 299 RTMLELINQLDGFDPRGNIKVLMATNRPDTLDPALMRPGRLDRKVEFALPDLAGRAHILK 358
Query: 135 TITAKMNLSDEVDLE-DYVAR--PDRISGADINAICQEVIMATNRA 177
I AK +S E D+ D +AR P+ +GA+I ++C E M RA
Sbjct: 359 -IHAKQ-MSVERDIRYDLLARLCPNS-TGAEIRSVCTEAGMFAIRA 401
Score = 233 (87.1 bits), Expect = 1.8e-17, P = 1.8e-17
Identities = 53/106 (50%), Positives = 71/106 (66%)
Query: 222 GNLQVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLVFSTITAKMNLSDEVDLE- 280
GN++V+MATNR DTLDPAL+RPGRLDRK+EF LPD + + I AK +S E D+
Sbjct: 315 GNIKVLMATNRPDTLDPALMRPGRLDRKVEFALPDLAGRAHILK-IHAKQ-MSVERDIRY 372
Query: 281 DYVAR--PDRISGADINAICQEAGMHAVRENRYIVLPKDFEKGYKK 324
D +AR P+ +GA+I ++C EAGM A+R R + KDF + K
Sbjct: 373 DLLARLCPNS-TGAEIRSVCTEAGMFAIRARRKVATEKDFLEAINK 417
Score = 142 (55.0 bits), Expect = 1.9e-07, Sum P(2) = 1.9e-07
Identities = 26/32 (81%), Positives = 30/32 (93%)
Query: 169 EVIMATNRADTLDPALLRPGRLDRKIEFPLPD 200
+V+MATNR DTLDPAL+RPGRLDRK+EF LPD
Sbjct: 318 KVLMATNRPDTLDPALMRPGRLDRKVEFALPD 349
Score = 46 (21.3 bits), Expect = 9.3e-38, Sum P(2) = 9.3e-38
Identities = 9/18 (50%), Positives = 11/18 (61%)
Query: 326 AGMHAVRENRYIVLPKDF 343
AGM A+R R + KDF
Sbjct: 394 AGMFAIRARRKVATEKDF 411
>UNIPROTKB|Q18787 [details] [associations]
symbol:rpt-1 "26S protease regulatory subunit 7"
species:6239 "Caenorhabditis elegans" [GO:0006200 "ATP catabolic
process" evidence=ISS] [GO:0005515 "protein binding" evidence=IPI]
[GO:0016887 "ATPase activity" evidence=ISS] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=ISS]
[GO:0000502 "proteasome complex" evidence=ISS] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GO:GO:0005634 GO:GO:0008340 GO:GO:0009792 GO:GO:0005737
GO:GO:0002119 GO:GO:0000003 GO:GO:0016887 GO:GO:0000502
GO:GO:0006511 EMBL:Z78012 eggNOG:COG1222 TIGRFAMs:TIGR01242
HOGENOM:HOG000225143 KO:K03061 OMA:DIRWELI
GeneTree:ENSGT00550000074978 PIR:T20152 RefSeq:NP_506005.1
ProteinModelPortal:Q18787 SMR:Q18787 IntAct:Q18787 MINT:MINT-212537
STRING:Q18787 PaxDb:Q18787 PRIDE:Q18787 EnsemblMetazoa:C52E4.4.1
EnsemblMetazoa:C52E4.4.2 GeneID:179641 KEGG:cel:CELE_C52E4.4
UCSC:C52E4.4.1 CTD:179641 WormBase:C52E4.4 InParanoid:Q18787
NextBio:906264 Uniprot:Q18787
Length = 435
Score = 375 (137.1 bits), Expect = 9.3e-38, Sum P(2) = 9.3e-38
Identities = 84/166 (50%), Positives = 107/166 (64%)
Query: 15 FIRVVGSEFVQKYLGEGPRMVRDVFRLAKENSPXXXXXXXXXXXXTKRFDAQTGADREVQ 74
FIRV+GSE VQKY+GEG RMVR++F +A+ RFD G D EVQ
Sbjct: 239 FIRVIGSELVQKYVGEGARMVRELFEMARTKKACLIFFDEIDAVGGARFDDGQGGDNEVQ 298
Query: 75 RILLELLNQMDGFDQTTNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLVFS 134
R +LEL+NQ+DGFD N+KV+MATNR DTLDPAL+RPGRLDRK+EF LPD + +
Sbjct: 299 RTMLELINQLDGFDPRGNIKVLMATNRPDTLDPALMRPGRLDRKVEFALPDLAGRAHILK 358
Query: 135 TITAKMNLSDEVDLE-DYVAR--PDRISGADINAICQEVIMATNRA 177
I AK +S E D+ D +AR P+ +GA+I ++C E M RA
Sbjct: 359 -IHAKQ-MSVERDIRYDLLARLCPNS-TGAEIRSVCTEAGMFAIRA 401
Score = 233 (87.1 bits), Expect = 1.8e-17, P = 1.8e-17
Identities = 53/106 (50%), Positives = 71/106 (66%)
Query: 222 GNLQVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLVFSTITAKMNLSDEVDLE- 280
GN++V+MATNR DTLDPAL+RPGRLDRK+EF LPD + + I AK +S E D+
Sbjct: 315 GNIKVLMATNRPDTLDPALMRPGRLDRKVEFALPDLAGRAHILK-IHAKQ-MSVERDIRY 372
Query: 281 DYVAR--PDRISGADINAICQEAGMHAVRENRYIVLPKDFEKGYKK 324
D +AR P+ +GA+I ++C EAGM A+R R + KDF + K
Sbjct: 373 DLLARLCPNS-TGAEIRSVCTEAGMFAIRARRKVATEKDFLEAINK 417
Score = 142 (55.0 bits), Expect = 1.9e-07, Sum P(2) = 1.9e-07
Identities = 26/32 (81%), Positives = 30/32 (93%)
Query: 169 EVIMATNRADTLDPALLRPGRLDRKIEFPLPD 200
+V+MATNR DTLDPAL+RPGRLDRK+EF LPD
Sbjct: 318 KVLMATNRPDTLDPALMRPGRLDRKVEFALPD 349
Score = 46 (21.3 bits), Expect = 9.3e-38, Sum P(2) = 9.3e-38
Identities = 9/18 (50%), Positives = 11/18 (61%)
Query: 326 AGMHAVRENRYIVLPKDF 343
AGM A+R R + KDF
Sbjct: 394 AGMFAIRARRKVATEKDF 411
>UNIPROTKB|Q5R8D7 [details] [associations]
symbol:PSMC2 "26S protease regulatory subunit 7"
species:9601 "Pongo abelii" [GO:0000502 "proteasome complex"
evidence=ISS] [GO:0000932 "cytoplasmic mRNA processing body"
evidence=ISS] [GO:0006200 "ATP catabolic process" evidence=ISS]
[GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=ISS] [GO:0016887 "ATPase activity" evidence=ISS]
[GO:0022624 "proteasome accessory complex" evidence=ISS]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0005634 GO:GO:0016887 GO:GO:0006511 HSSP:Q01853
GO:GO:0000932 TIGRFAMs:TIGR01242 HOVERGEN:HBG000109 GO:GO:0022624
KO:K03061 CTD:5701 EMBL:CR859816 RefSeq:NP_001126144.1
UniGene:Pab.13078 ProteinModelPortal:Q5R8D7 PRIDE:Q5R8D7
GeneID:100173102 KEGG:pon:100173102 InParanoid:Q5R8D7
Uniprot:Q5R8D7
Length = 433
Score = 374 (136.7 bits), Expect = 9.3e-38, Sum P(2) = 9.3e-38
Identities = 80/165 (48%), Positives = 104/165 (63%)
Query: 15 FIRVVGSEFVQKYLGEGPRMVRDVFRLAKENSPXXXXXXXXXXXXTKRFDAQTGADREVQ 74
FIRV+GSE VQKY+GEG RMVR++F +A+ RFD G D EVQ
Sbjct: 237 FIRVIGSELVQKYVGEGARMVRELFEMARTKKACLIFFDEIDAIGGARFDDGAGGDNEVQ 296
Query: 75 RILLELLNQMDGFDQTTNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLVFS 134
R +LEL+NQ+DGFD N+KV+MATNR DTLDPAL+RPGRLDRKIEF LPD + +
Sbjct: 297 RTMLELINQLDGFDPRGNIKVLMATNRPDTLDPALMRPGRLDRKIEFSLPDLEGRTHILK 356
Query: 135 TITAKMNLSDEVDLEDYVAR--PDRISGADINAICQEVIMATNRA 177
M++ ++ E +AR P+ +GA+I ++C E M RA
Sbjct: 357 IHARSMSVERDIRFE-LLARLCPNS-TGAEIRSVCTEAGMFAIRA 399
Score = 233 (87.1 bits), Expect = 1.8e-17, P = 1.8e-17
Identities = 51/111 (45%), Positives = 70/111 (63%)
Query: 222 GNLQVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLVFSTITAKMNLSDEVDLED 281
GN++V+MATNR DTLDPAL+RPGRLDRKIEF LPD + + M++ ++ E
Sbjct: 313 GNIKVLMATNRPDTLDPALMRPGRLDRKIEFSLPDLEGRTHILKIHARSMSVERDIRFE- 371
Query: 282 YVAR--PDRISGADINAICQEAGMHAVRENRYIVLPKDFEKGYKKCAGMHA 330
+AR P+ +GA+I ++C EAGM A+R R I KDF + K +A
Sbjct: 372 LLARLCPNS-TGAEIRSVCTEAGMFAIRARRKIATEKDFLEAVNKVIKSYA 421
Score = 143 (55.4 bits), Expect = 1.1e-07, Sum P(2) = 1.1e-07
Identities = 27/32 (84%), Positives = 30/32 (93%)
Query: 169 EVIMATNRADTLDPALLRPGRLDRKIEFPLPD 200
+V+MATNR DTLDPAL+RPGRLDRKIEF LPD
Sbjct: 316 KVLMATNRPDTLDPALMRPGRLDRKIEFSLPD 347
Score = 47 (21.6 bits), Expect = 9.3e-38, Sum P(2) = 9.3e-38
Identities = 10/18 (55%), Positives = 11/18 (61%)
Query: 326 AGMHAVRENRYIVLPKDF 343
AGM A+R R I KDF
Sbjct: 392 AGMFAIRARRKIATEKDF 409
>RGD|3428 [details] [associations]
symbol:Psmc2 "proteasome (prosome, macropain) 26S subunit, ATPase
2" species:10116 "Rattus norvegicus" [GO:0000502 "proteasome complex"
evidence=ISO] [GO:0000932 "cytoplasmic mRNA processing body"
evidence=ISS] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA;ISO;IDA] [GO:0005737 "cytoplasm" evidence=ISO]
[GO:0005739 "mitochondrion" evidence=IEA;ISO] [GO:0006200 "ATP
catabolic process" evidence=ISO] [GO:0006511 "ubiquitin-dependent
protein catabolic process" evidence=IEA;ISO] [GO:0016887 "ATPase
activity" evidence=IEA;ISO] [GO:0017025 "TBP-class protein binding"
evidence=IPI] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0022624 "proteasome accessory complex"
evidence=IEA;ISO;ISS] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0005730 "nucleolus" evidence=ISO]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
RGD:3428 GO:GO:0005739 GO:GO:0005524 GO:GO:0005634 GO:GO:0016887
GO:GO:0006511 GO:GO:0000932 eggNOG:COG1222 TIGRFAMs:TIGR01242
HOVERGEN:HBG000109 GO:GO:0022624 HOGENOM:HOG000225143 KO:K03061
CTD:5701 OrthoDB:EOG4RXZ05 EMBL:D50694 EMBL:BC061542 EMBL:U13895
IPI:IPI00421600 RefSeq:NP_150239.1 UniGene:Rn.1202
ProteinModelPortal:Q63347 IntAct:Q63347 MINT:MINT-1794034
STRING:Q63347 PhosphoSite:Q63347 PRIDE:Q63347 GeneID:25581
KEGG:rno:25581 InParanoid:Q63347 NextBio:607227 Genevestigator:Q63347
GermOnline:ENSRNOG00000012026 Uniprot:Q63347
Length = 433
Score = 373 (136.4 bits), Expect = 1.2e-37, Sum P(2) = 1.2e-37
Identities = 80/165 (48%), Positives = 104/165 (63%)
Query: 15 FIRVVGSEFVQKYLGEGPRMVRDVFRLAKENSPXXXXXXXXXXXXTKRFDAQTGADREVQ 74
FI V+GSE VQKY+GEG RMVR++F +A+ RFD G D EVQ
Sbjct: 237 FIPVIGSELVQKYVGEGARMVRELFEMARTKKACLIFFDEIDAIGGARFDDGAGGDNEVQ 296
Query: 75 RILLELLNQMDGFDQTTNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLVFS 134
R +LEL+NQ+DGFD N+KV+MATNR DTLDPAL+RPGRLDRKIEF LPD + +F
Sbjct: 297 RTMLELINQLDGFDPRGNIKVLMATNRPDTLDPALMRPGRLDRKIEFSLPDLEGRTHIFK 356
Query: 135 TITAKMNLSDEVDLEDYVAR--PDRISGADINAICQEVIMATNRA 177
M++ ++ E +AR P+ +GA+I ++C E M RA
Sbjct: 357 IHARSMSVERDIRFE-LLARLCPNS-TGAEIRSVCTEAGMFAIRA 399
Score = 239 (89.2 bits), Expect = 3.0e-18, P = 3.0e-18
Identities = 52/111 (46%), Positives = 71/111 (63%)
Query: 222 GNLQVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLVFSTITAKMNLSDEVDLED 281
GN++V+MATNR DTLDPAL+RPGRLDRKIEF LPD + +F M++ ++ E
Sbjct: 313 GNIKVLMATNRPDTLDPALMRPGRLDRKIEFSLPDLEGRTHIFKIHARSMSVERDIRFE- 371
Query: 282 YVAR--PDRISGADINAICQEAGMHAVRENRYIVLPKDFEKGYKKCAGMHA 330
+AR P+ +GA+I ++C EAGM A+R R I KDF + K +A
Sbjct: 372 LLARLCPNS-TGAEIRSVCTEAGMFAIRARRKIATEKDFLEAVNKVIKSYA 421
Score = 147 (56.8 bits), Expect = 3.8e-08, Sum P(2) = 3.8e-08
Identities = 29/48 (60%), Positives = 35/48 (72%)
Query: 169 EVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLVFSTITAKMN 216
+V+MATNR DTLDPAL+RPGRLDRKIEF LPD + +F M+
Sbjct: 316 KVLMATNRPDTLDPALMRPGRLDRKIEFSLPDLEGRTHIFKIHARSMS 363
Score = 47 (21.6 bits), Expect = 1.2e-37, Sum P(2) = 1.2e-37
Identities = 10/18 (55%), Positives = 11/18 (61%)
Query: 326 AGMHAVRENRYIVLPKDF 343
AGM A+R R I KDF
Sbjct: 392 AGMFAIRARRKIATEKDF 409
>UNIPROTKB|Q63347 [details] [associations]
symbol:Psmc2 "26S protease regulatory subunit 7"
species:10116 "Rattus norvegicus" [GO:0005524 "ATP binding"
evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 RGD:3428 GO:GO:0005739 GO:GO:0005524 GO:GO:0005634
GO:GO:0016887 GO:GO:0006511 GO:GO:0000932 eggNOG:COG1222
TIGRFAMs:TIGR01242 HOVERGEN:HBG000109 GO:GO:0022624
HOGENOM:HOG000225143 KO:K03061 CTD:5701 OrthoDB:EOG4RXZ05
EMBL:D50694 EMBL:BC061542 EMBL:U13895 IPI:IPI00421600
RefSeq:NP_150239.1 UniGene:Rn.1202 ProteinModelPortal:Q63347
IntAct:Q63347 MINT:MINT-1794034 STRING:Q63347 PhosphoSite:Q63347
PRIDE:Q63347 GeneID:25581 KEGG:rno:25581 InParanoid:Q63347
NextBio:607227 Genevestigator:Q63347 GermOnline:ENSRNOG00000012026
Uniprot:Q63347
Length = 433
Score = 373 (136.4 bits), Expect = 1.2e-37, Sum P(2) = 1.2e-37
Identities = 80/165 (48%), Positives = 104/165 (63%)
Query: 15 FIRVVGSEFVQKYLGEGPRMVRDVFRLAKENSPXXXXXXXXXXXXTKRFDAQTGADREVQ 74
FI V+GSE VQKY+GEG RMVR++F +A+ RFD G D EVQ
Sbjct: 237 FIPVIGSELVQKYVGEGARMVRELFEMARTKKACLIFFDEIDAIGGARFDDGAGGDNEVQ 296
Query: 75 RILLELLNQMDGFDQTTNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLVFS 134
R +LEL+NQ+DGFD N+KV+MATNR DTLDPAL+RPGRLDRKIEF LPD + +F
Sbjct: 297 RTMLELINQLDGFDPRGNIKVLMATNRPDTLDPALMRPGRLDRKIEFSLPDLEGRTHIFK 356
Query: 135 TITAKMNLSDEVDLEDYVAR--PDRISGADINAICQEVIMATNRA 177
M++ ++ E +AR P+ +GA+I ++C E M RA
Sbjct: 357 IHARSMSVERDIRFE-LLARLCPNS-TGAEIRSVCTEAGMFAIRA 399
Score = 239 (89.2 bits), Expect = 3.0e-18, P = 3.0e-18
Identities = 52/111 (46%), Positives = 71/111 (63%)
Query: 222 GNLQVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLVFSTITAKMNLSDEVDLED 281
GN++V+MATNR DTLDPAL+RPGRLDRKIEF LPD + +F M++ ++ E
Sbjct: 313 GNIKVLMATNRPDTLDPALMRPGRLDRKIEFSLPDLEGRTHIFKIHARSMSVERDIRFE- 371
Query: 282 YVAR--PDRISGADINAICQEAGMHAVRENRYIVLPKDFEKGYKKCAGMHA 330
+AR P+ +GA+I ++C EAGM A+R R I KDF + K +A
Sbjct: 372 LLARLCPNS-TGAEIRSVCTEAGMFAIRARRKIATEKDFLEAVNKVIKSYA 421
Score = 147 (56.8 bits), Expect = 3.8e-08, Sum P(2) = 3.8e-08
Identities = 29/48 (60%), Positives = 35/48 (72%)
Query: 169 EVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLVFSTITAKMN 216
+V+MATNR DTLDPAL+RPGRLDRKIEF LPD + +F M+
Sbjct: 316 KVLMATNRPDTLDPALMRPGRLDRKIEFSLPDLEGRTHIFKIHARSMS 363
Score = 47 (21.6 bits), Expect = 1.2e-37, Sum P(2) = 1.2e-37
Identities = 10/18 (55%), Positives = 11/18 (61%)
Query: 326 AGMHAVRENRYIVLPKDF 343
AGM A+R R I KDF
Sbjct: 392 AGMFAIRARRKIATEKDF 409
>GENEDB_PFALCIPARUM|PF13_0033 [details] [associations]
symbol:PF13_0033 "26S proteasome regulatory
subunit, putative" species:5833 "Plasmodium falciparum" [GO:0005838
"proteasome regulatory particle" evidence=ISS] [GO:0004175
"endopeptidase activity" evidence=ISS] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=ISS]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0005737 GO:GO:0004175 GO:GO:0006511 HSSP:Q01853
GO:GO:0017111 EMBL:AL844509 KO:K03064 TIGRFAMs:TIGR01242
HOGENOM:HOG000225143 OMA:EHKEVES ProtClustDB:CLSZ2429012
GO:GO:0005838 RefSeq:XP_001349791.1 ProteinModelPortal:Q8IEQ1
PRIDE:Q8IEQ1 EnsemblProtists:PF13_0033:mRNA GeneID:814012
KEGG:pfa:PF13_0033 EuPathDB:PlasmoDB:PF3D7_1306400 Uniprot:Q8IEQ1
Length = 393
Score = 367 (134.2 bits), Expect = 1.2e-37, Sum P(2) = 1.2e-37
Identities = 76/176 (43%), Positives = 103/176 (58%)
Query: 2 LLCTSFDTELVTAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENSPXXXXXXXXXXXXTK 61
LL + + + F+R+V S V KY+GE R++R++F AKE+ P +
Sbjct: 186 LLARAMASNINCNFMRIVVSAIVDKYIGESARIIREMFNYAKEHQPCIIFMDEIDAIGGR 245
Query: 62 RFDAQTGADREVQRILLELLNQMDGFDQTTNVKVIMATNRADTLDPALLRPGRLDRKIEF 121
RF T ADRE+QR L+ELLN +DGF++ NVK+IMATNR D LDPAL+RPGRLDRKIE
Sbjct: 246 RFSQGTSADREIQRTLMELLNHLDGFEELGNVKIIMATNRPDVLDPALVRPGRLDRKIEI 305
Query: 122 PLPDRRQKRLVFSTITAKMNLSDEVDLEDYVARPDRISGADINAICQEVIMATNRA 177
PLP+ + + KM ++D E D +GAD+ +C E M RA
Sbjct: 306 PLPNETARIEILKIHANKMTKLGDIDYESVCRLCDGFNGADLRNVCTEAGMFAIRA 361
Score = 243 (90.6 bits), Expect = 5.0e-19, P = 5.0e-19
Identities = 52/125 (41%), Positives = 72/125 (57%)
Query: 200 DRRQKRLVFSTITAKMNFMLNIGNLQVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQ 259
DR +R + + F +GN+++IMATNR D LDPAL+RPGRLDRKIE PLP+
Sbjct: 254 DREIQRTLMELLNHLDGFE-ELGNVKIIMATNRPDVLDPALVRPGRLDRKIEIPLPNETA 312
Query: 260 KRLVFSTITAKMNLSDEVDLEDYVARPDRISGADINAICQEAGMHAVRENRYIVLPKDFE 319
+ + KM ++D E D +GAD+ +C EAGM A+R R V+ +DF
Sbjct: 313 RIEILKIHANKMTKLGDIDYESVCRLCDGFNGADLRNVCTEAGMFAIRAMRDYVIEEDFY 372
Query: 320 KGYKK 324
K +K
Sbjct: 373 KAARK 377
Score = 143 (55.4 bits), Expect = 1.9e-08, Sum P(2) = 1.9e-08
Identities = 35/74 (47%), Positives = 44/74 (59%)
Query: 169 EVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLVFSTITAKMNFMLNIGNLQVIM 228
++IMATNR D LDPAL+RPGRLDRKIE PLP+ R+ I A N M +G++
Sbjct: 278 KIIMATNRPDVLDPALVRPGRLDRKIEIPLPNETA-RIEILKIHA--NKMTKLGDIDYES 334
Query: 229 ATNRADTLDPALLR 242
D + A LR
Sbjct: 335 VCRLCDGFNGADLR 348
Score = 53 (23.7 bits), Expect = 1.2e-37, Sum P(2) = 1.2e-37
Identities = 15/39 (38%), Positives = 22/39 (56%)
Query: 326 AGMHAVRENRYIVLPKDFEKGYK--NNTKKDESEHEFYK 362
AGM A+R R V+ +DF K + + KK E + E+ K
Sbjct: 354 AGMFAIRAMRDYVIEEDFYKAARKISEGKKLEGKIEYEK 392
>UNIPROTKB|Q8IEQ1 [details] [associations]
symbol:PF13_0033 "26S proteasome regulatory subunit,
putative" species:36329 "Plasmodium falciparum 3D7" [GO:0004175
"endopeptidase activity" evidence=ISS] [GO:0005838 "proteasome
regulatory particle" evidence=ISS] [GO:0006511 "ubiquitin-dependent
protein catabolic process" evidence=ISS] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GO:GO:0005737 GO:GO:0004175 GO:GO:0006511 HSSP:Q01853 GO:GO:0017111
EMBL:AL844509 KO:K03064 TIGRFAMs:TIGR01242 HOGENOM:HOG000225143
OMA:EHKEVES ProtClustDB:CLSZ2429012 GO:GO:0005838
RefSeq:XP_001349791.1 ProteinModelPortal:Q8IEQ1 PRIDE:Q8IEQ1
EnsemblProtists:PF13_0033:mRNA GeneID:814012 KEGG:pfa:PF13_0033
EuPathDB:PlasmoDB:PF3D7_1306400 Uniprot:Q8IEQ1
Length = 393
Score = 367 (134.2 bits), Expect = 1.2e-37, Sum P(2) = 1.2e-37
Identities = 76/176 (43%), Positives = 103/176 (58%)
Query: 2 LLCTSFDTELVTAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENSPXXXXXXXXXXXXTK 61
LL + + + F+R+V S V KY+GE R++R++F AKE+ P +
Sbjct: 186 LLARAMASNINCNFMRIVVSAIVDKYIGESARIIREMFNYAKEHQPCIIFMDEIDAIGGR 245
Query: 62 RFDAQTGADREVQRILLELLNQMDGFDQTTNVKVIMATNRADTLDPALLRPGRLDRKIEF 121
RF T ADRE+QR L+ELLN +DGF++ NVK+IMATNR D LDPAL+RPGRLDRKIE
Sbjct: 246 RFSQGTSADREIQRTLMELLNHLDGFEELGNVKIIMATNRPDVLDPALVRPGRLDRKIEI 305
Query: 122 PLPDRRQKRLVFSTITAKMNLSDEVDLEDYVARPDRISGADINAICQEVIMATNRA 177
PLP+ + + KM ++D E D +GAD+ +C E M RA
Sbjct: 306 PLPNETARIEILKIHANKMTKLGDIDYESVCRLCDGFNGADLRNVCTEAGMFAIRA 361
Score = 243 (90.6 bits), Expect = 5.0e-19, P = 5.0e-19
Identities = 52/125 (41%), Positives = 72/125 (57%)
Query: 200 DRRQKRLVFSTITAKMNFMLNIGNLQVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQ 259
DR +R + + F +GN+++IMATNR D LDPAL+RPGRLDRKIE PLP+
Sbjct: 254 DREIQRTLMELLNHLDGFE-ELGNVKIIMATNRPDVLDPALVRPGRLDRKIEIPLPNETA 312
Query: 260 KRLVFSTITAKMNLSDEVDLEDYVARPDRISGADINAICQEAGMHAVRENRYIVLPKDFE 319
+ + KM ++D E D +GAD+ +C EAGM A+R R V+ +DF
Sbjct: 313 RIEILKIHANKMTKLGDIDYESVCRLCDGFNGADLRNVCTEAGMFAIRAMRDYVIEEDFY 372
Query: 320 KGYKK 324
K +K
Sbjct: 373 KAARK 377
Score = 143 (55.4 bits), Expect = 1.9e-08, Sum P(2) = 1.9e-08
Identities = 35/74 (47%), Positives = 44/74 (59%)
Query: 169 EVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLVFSTITAKMNFMLNIGNLQVIM 228
++IMATNR D LDPAL+RPGRLDRKIE PLP+ R+ I A N M +G++
Sbjct: 278 KIIMATNRPDVLDPALVRPGRLDRKIEIPLPNETA-RIEILKIHA--NKMTKLGDIDYES 334
Query: 229 ATNRADTLDPALLR 242
D + A LR
Sbjct: 335 VCRLCDGFNGADLR 348
Score = 53 (23.7 bits), Expect = 1.2e-37, Sum P(2) = 1.2e-37
Identities = 15/39 (38%), Positives = 22/39 (56%)
Query: 326 AGMHAVRENRYIVLPKDFEKGYK--NNTKKDESEHEFYK 362
AGM A+R R V+ +DF K + + KK E + E+ K
Sbjct: 354 AGMFAIRAMRDYVIEEDFYKAARKISEGKKLEGKIEYEK 392
>SGD|S000005643 [details] [associations]
symbol:RPT5 "ATPase of the 19S regulatory particle of the 26S
proteasome" species:4932 "Saccharomyces cerevisiae" [GO:0008540
"proteasome regulatory particle, base subcomplex" evidence=IDA]
[GO:0030163 "protein catabolic process" evidence=IEA] [GO:0016887
"ATPase activity" evidence=ISS] [GO:0006511 "ubiquitin-dependent
protein catabolic process" evidence=IMP] [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0000502 "proteasome complex"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0045899 "positive regulation of RNA polymerase II
transcriptional preinitiation complex assembly" evidence=IMP]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0070682
"proteasome regulatory particle assembly" evidence=IMP]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
SGD:S000005643 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737
EMBL:BK006948 GO:GO:0006511 GO:GO:0017111 EMBL:X90518 EMBL:X94335
GO:GO:0045899 GeneTree:ENSGT00560000077230 GO:GO:0070682
eggNOG:COG1222 TIGRFAMs:TIGR01242 KO:K03065 HOGENOM:HOG000225143
GO:GO:0008540 PDB:4B4T PDBsum:4B4T OMA:GALMYGP OrthoDB:EOG40VZZ2
EMBL:X73569 EMBL:Z75025 PIR:S46605 RefSeq:NP_014760.3
RefSeq:NP_014762.3 ProteinModelPortal:P33297 SMR:P33297
DIP:DIP-1590N IntAct:P33297 MINT:MINT-383887 STRING:P33297
PaxDb:P33297 PeptideAtlas:P33297 EnsemblFungi:YOR117W GeneID:854284
GeneID:854286 KEGG:sce:YOR117W KEGG:sce:YOR119C KO:K07178
NextBio:976260 Genevestigator:P33297 GermOnline:YOR117W
Uniprot:P33297
Length = 434
Score = 375 (137.1 bits), Expect = 2.4e-37, Sum P(2) = 2.4e-37
Identities = 75/175 (42%), Positives = 101/175 (57%)
Query: 2 LLCTSFDTELVTAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENSPXXXXXXXXXXXXTK 61
LL + + F+++ + VQ Y+GEG ++VRD F LAKE +P TK
Sbjct: 230 LLARACAAQTNATFLKLAAPQLVQMYIGEGAKLVRDAFALAKEKAPTIIFIDELDAIGTK 289
Query: 62 RFDAQTGADREVQRILLELLNQMDGFDQTTNVKVIMATNRADTLDPALLRPGRLDRKIEF 121
RFD++ DREVQR +LELLNQ+DGF VKV+ ATNR D LDPALLR GRLDRKIEF
Sbjct: 290 RFDSEKSGDREVQRTMLELLNQLDGFSSDDRVKVLAATNRVDVLDPALLRSGRLDRKIEF 349
Query: 122 PLPDRRQKRLVFSTITAKMNLSDEVDLEDYVARPDRISGADINAICQEVIMATNR 176
PLP + + + KM D+++ ++ D +GA + A+ E M R
Sbjct: 350 PLPSEDSRAQILQIHSRKMTTDDDINWQELARSTDEFNGAQLKAVTVEAGMIALR 404
Score = 214 (80.4 bits), Expect = 3.9e-15, P = 3.9e-15
Identities = 46/122 (37%), Positives = 68/122 (55%)
Query: 200 DRRQKRLVFSTITAKMNFMLNIGNLQVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQ 259
DR +R + + F + ++V+ ATNR D LDPALLR GRLDRKIEFPLP
Sbjct: 298 DREVQRTMLELLNQLDGFSSD-DRVKVLAATNRVDVLDPALLRSGRLDRKIEFPLPSEDS 356
Query: 260 KRLVFSTITAKMNLSDEVDLEDYVARPDRISGADINAICQEAGMHAVRENRYIVLPKDFE 319
+ + + KM D+++ ++ D +GA + A+ EAGM A+R + V +DF
Sbjct: 357 RAQILQIHSRKMTTDDDINWQELARSTDEFNGAQLKAVTVEAGMIALRNGQSSVKHEDFV 416
Query: 320 KG 321
+G
Sbjct: 417 EG 418
Score = 135 (52.6 bits), Expect = 3.0e-06, Sum P(2) = 3.0e-06
Identities = 27/47 (57%), Positives = 32/47 (68%)
Query: 169 EVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLVFSTITAKM 215
+V+ ATNR D LDPALLR GRLDRKIEFPLP + + + KM
Sbjct: 322 KVLAATNRVDVLDPALLRSGRLDRKIEFPLPSEDSRAQILQIHSRKM 368
Score = 42 (19.8 bits), Expect = 2.4e-37, Sum P(2) = 2.4e-37
Identities = 11/36 (30%), Positives = 16/36 (44%)
Query: 326 AGMHAVRENRYIVLPKDFEKGYKNNTKKDESEHEFY 361
AGM A+R + V +DF +G + FY
Sbjct: 398 AGMIALRNGQSSVKHEDFVEGISEVQARKSKSVSFY 433
>UNIPROTKB|O42586 [details] [associations]
symbol:psmc3-b "26S protease regulatory subunit 6A-B"
species:8355 "Xenopus laevis" [GO:0022624 "proteasome accessory
complex" evidence=ISS] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737
GO:GO:0030163 GO:GO:0017111 TIGRFAMs:TIGR01242 HOVERGEN:HBG000109
GO:GO:0022624 EMBL:Y10460 UniGene:Xl.113 ProteinModelPortal:O42586
Xenbase:XB-GENE-1009853 Uniprot:O42586
Length = 404
Score = 400 (145.9 bits), Expect = 3.0e-37, P = 3.0e-37
Identities = 81/179 (45%), Positives = 109/179 (60%)
Query: 2 LLCTSFDTELVTAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENSPXXXXXXXXXXXXTK 61
LL + + F+++ G + VQ ++G+G ++VRD F LAKE +P K
Sbjct: 200 LLARACAAQTKATFLKLAGPQLVQMFIGDGAKLVRDAFSLAKEKAPSIIFIDELDAIGNK 259
Query: 62 RFDAQTGADREVQRILLELLNQMDGFDQTTNVKVIMATNRADTLDPALLRPGRLDRKIEF 121
RFD++ DREVQR +LELLNQ+DGF TT VKVI ATNR D LDPALLR GRLDRKIEF
Sbjct: 260 RFDSEKAGDREVQRTMLELLNQLDGFQPTTQVKVIAATNRVDILDPALLRSGRLDRKIEF 319
Query: 122 PLPDRRQKRLVFSTITAKMNLSDEVDLEDYVARPDRISGADINAICQEV-IMATNRADT 179
P+P+ + + + KMN+S +V+ E+ D +GA A+C E I+A R T
Sbjct: 320 PMPNEEARARIMQIHSRKMNVSPDVNYEELARCTDDFNGAQCKAVCVEAGIIALRRGAT 378
Score = 215 (80.7 bits), Expect = 2.4e-15, P = 2.4e-15
Identities = 47/122 (38%), Positives = 69/122 (56%)
Query: 200 DRRQKRLVFSTITAKMNFMLNIGNLQVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQ 259
DR +R + + F ++VI ATNR D LDPALLR GRLDRKIEFP+P+
Sbjct: 268 DREVQRTMLELLNQLDGFQPTT-QVKVIAATNRVDILDPALLRSGRLDRKIEFPMPNEEA 326
Query: 260 KRLVFSTITAKMNLSDEVDLEDYVARPDRISGADINAICQEAGMHAVRENRYIVLPKDFE 319
+ + + KMN+S +V+ E+ D +GA A+C EAG+ A+R + +D+
Sbjct: 327 RARIMQIHSRKMNVSPDVNYEELARCTDDFNGAQCKAVCVEAGIIALRRGATELTHEDYM 386
Query: 320 KG 321
+G
Sbjct: 387 EG 388
Score = 143 (55.4 bits), Expect = 5.1e-07, P = 5.1e-07
Identities = 29/63 (46%), Positives = 40/63 (63%)
Query: 169 EVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLVFSTITAKMNFMLNIGNLQVIM 228
+VI ATNR D LDPALLR GRLDRKIEFP+P+ + + + KMN ++ ++
Sbjct: 292 KVIAATNRVDILDPALLRSGRLDRKIEFPMPNEEARARIMQIHSRKMNVSPDVNYEELAR 351
Query: 229 ATN 231
T+
Sbjct: 352 CTD 354
>UNIPROTKB|F1NDQ1 [details] [associations]
symbol:PSMC3 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0005737 "cytoplasm" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005737 GO:GO:0030163
GO:GO:0017111 GeneTree:ENSGT00560000077230 TIGRFAMs:TIGR01242
EMBL:AADN02033470 EMBL:AADN02033469 IPI:IPI00819977
Ensembl:ENSGALT00000013163 Uniprot:F1NDQ1
Length = 385
Score = 397 (144.8 bits), Expect = 6.3e-37, P = 6.3e-37
Identities = 80/179 (44%), Positives = 109/179 (60%)
Query: 2 LLCTSFDTELVTAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENSPXXXXXXXXXXXXTK 61
LL + + F+++ G + VQ ++G+G ++VRD F LAKE +P TK
Sbjct: 181 LLARACAAQTKATFLKLAGPQLVQMFIGDGAKLVRDAFALAKEKAPSIIFIDELDAIGTK 240
Query: 62 RFDAQTGADREVQRILLELLNQMDGFDQTTNVKVIMATNRADTLDPALLRPGRLDRKIEF 121
RFD++ DREVQR +LELLNQ+DGF T VKVI ATNR D LDPALLR GRLDRKIEF
Sbjct: 241 RFDSEKAGDREVQRTMLELLNQLDGFQPNTQVKVIAATNRVDILDPALLRSGRLDRKIEF 300
Query: 122 PLPDRRQKRLVFSTITAKMNLSDEVDLEDYVARPDRISGADINAICQEV-IMATNRADT 179
P+P+ + + + KMN+S +V+ E+ D +GA A+C E ++A R T
Sbjct: 301 PMPNEEARARIMQIHSRKMNVSPDVNYEELARCTDDFNGAQCKAVCVEAGMIALRRGAT 359
Score = 225 (84.3 bits), Expect = 1.1e-16, P = 1.1e-16
Identities = 49/122 (40%), Positives = 70/122 (57%)
Query: 200 DRRQKRLVFSTITAKMNFMLNIGNLQVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQ 259
DR +R + + F N ++VI ATNR D LDPALLR GRLDRKIEFP+P+
Sbjct: 249 DREVQRTMLELLNQLDGFQPNT-QVKVIAATNRVDILDPALLRSGRLDRKIEFPMPNEEA 307
Query: 260 KRLVFSTITAKMNLSDEVDLEDYVARPDRISGADINAICQEAGMHAVRENRYIVLPKDFE 319
+ + + KMN+S +V+ E+ D +GA A+C EAGM A+R + +D+
Sbjct: 308 RARIMQIHSRKMNVSPDVNYEELARCTDDFNGAQCKAVCVEAGMIALRRGATELTHEDYM 367
Query: 320 KG 321
+G
Sbjct: 368 EG 369
Score = 143 (55.4 bits), Expect = 4.6e-07, P = 4.6e-07
Identities = 29/63 (46%), Positives = 40/63 (63%)
Query: 169 EVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLVFSTITAKMNFMLNIGNLQVIM 228
+VI ATNR D LDPALLR GRLDRKIEFP+P+ + + + KMN ++ ++
Sbjct: 273 KVIAATNRVDILDPALLRSGRLDRKIEFPMPNEEARARIMQIHSRKMNVSPDVNYEELAR 332
Query: 229 ATN 231
T+
Sbjct: 333 CTD 335
>UNIPROTKB|F1P3L9 [details] [associations]
symbol:PSMC3 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0030163 "protein catabolic process" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0001824 "blastocyst
development" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0022624 "proteasome
accessory complex" evidence=IEA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GO:GO:0005634 GO:GO:0005737 GO:GO:0030163 GO:GO:0017111
GeneTree:ENSGT00560000077230 TIGRFAMs:TIGR01242 OMA:GALMYGP
EMBL:AADN02033470 EMBL:AADN02033469 IPI:IPI00601469
Ensembl:ENSGALT00000038503 Uniprot:F1P3L9
Length = 389
Score = 397 (144.8 bits), Expect = 6.3e-37, P = 6.3e-37
Identities = 80/179 (44%), Positives = 109/179 (60%)
Query: 2 LLCTSFDTELVTAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENSPXXXXXXXXXXXXTK 61
LL + + F+++ G + VQ ++G+G ++VRD F LAKE +P TK
Sbjct: 185 LLARACAAQTKATFLKLAGPQLVQMFIGDGAKLVRDAFALAKEKAPSIIFIDELDAIGTK 244
Query: 62 RFDAQTGADREVQRILLELLNQMDGFDQTTNVKVIMATNRADTLDPALLRPGRLDRKIEF 121
RFD++ DREVQR +LELLNQ+DGF T VKVI ATNR D LDPALLR GRLDRKIEF
Sbjct: 245 RFDSEKAGDREVQRTMLELLNQLDGFQPNTQVKVIAATNRVDILDPALLRSGRLDRKIEF 304
Query: 122 PLPDRRQKRLVFSTITAKMNLSDEVDLEDYVARPDRISGADINAICQEV-IMATNRADT 179
P+P+ + + + KMN+S +V+ E+ D +GA A+C E ++A R T
Sbjct: 305 PMPNEEARARIMQIHSRKMNVSPDVNYEELARCTDDFNGAQCKAVCVEAGMIALRRGAT 363
Score = 225 (84.3 bits), Expect = 1.2e-16, P = 1.2e-16
Identities = 49/122 (40%), Positives = 70/122 (57%)
Query: 200 DRRQKRLVFSTITAKMNFMLNIGNLQVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQ 259
DR +R + + F N ++VI ATNR D LDPALLR GRLDRKIEFP+P+
Sbjct: 253 DREVQRTMLELLNQLDGFQPNT-QVKVIAATNRVDILDPALLRSGRLDRKIEFPMPNEEA 311
Query: 260 KRLVFSTITAKMNLSDEVDLEDYVARPDRISGADINAICQEAGMHAVRENRYIVLPKDFE 319
+ + + KMN+S +V+ E+ D +GA A+C EAGM A+R + +D+
Sbjct: 312 RARIMQIHSRKMNVSPDVNYEELARCTDDFNGAQCKAVCVEAGMIALRRGATELTHEDYM 371
Query: 320 KG 321
+G
Sbjct: 372 EG 373
Score = 143 (55.4 bits), Expect = 4.7e-07, P = 4.7e-07
Identities = 29/63 (46%), Positives = 40/63 (63%)
Query: 169 EVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLVFSTITAKMNFMLNIGNLQVIM 228
+VI ATNR D LDPALLR GRLDRKIEFP+P+ + + + KMN ++ ++
Sbjct: 277 KVIAATNRVDILDPALLRSGRLDRKIEFPMPNEEARARIMQIHSRKMNVSPDVNYEELAR 336
Query: 229 ATN 231
T+
Sbjct: 337 CTD 339
>UNIPROTKB|F1MWE0 [details] [associations]
symbol:PSMC3 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0022624 "proteasome accessory complex" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0001824 "blastocyst development" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0030163 "protein
catabolic process" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0030163
GO:GO:0017111 GeneTree:ENSGT00560000077230 GO:GO:0001824
TIGRFAMs:TIGR01242 OMA:GALMYGP EMBL:DAAA02041602 IPI:IPI00701790
UniGene:Bt.49089 Ensembl:ENSBTAT00000028983 NextBio:20868523
Uniprot:F1MWE0
Length = 456
Score = 397 (144.8 bits), Expect = 6.3e-37, P = 6.3e-37
Identities = 80/179 (44%), Positives = 109/179 (60%)
Query: 2 LLCTSFDTELVTAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENSPXXXXXXXXXXXXTK 61
LL + + F+++ G + VQ ++G+G ++VRD F LAKE +P TK
Sbjct: 252 LLARACAAQTKATFLKLAGPQLVQMFIGDGAKLVRDAFALAKEKAPSIIFIDELDAIGTK 311
Query: 62 RFDAQTGADREVQRILLELLNQMDGFDQTTNVKVIMATNRADTLDPALLRPGRLDRKIEF 121
RFD++ DREVQR +LELLNQ+DGF T VKVI ATNR D LDPALLR GRLDRKIEF
Sbjct: 312 RFDSEKAGDREVQRTMLELLNQLDGFQPNTQVKVIAATNRVDILDPALLRSGRLDRKIEF 371
Query: 122 PLPDRRQKRLVFSTITAKMNLSDEVDLEDYVARPDRISGADINAICQEV-IMATNRADT 179
P+P+ + + + KMN+S +V+ E+ D +GA A+C E ++A R T
Sbjct: 372 PMPNEEARARIMQIHSRKMNVSPDVNYEELARCTDDFNGAQCKAVCVEAGMIALRRGAT 430
Score = 225 (84.3 bits), Expect = 2.2e-16, P = 2.2e-16
Identities = 49/122 (40%), Positives = 70/122 (57%)
Query: 200 DRRQKRLVFSTITAKMNFMLNIGNLQVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQ 259
DR +R + + F N ++VI ATNR D LDPALLR GRLDRKIEFP+P+
Sbjct: 320 DREVQRTMLELLNQLDGFQPNT-QVKVIAATNRVDILDPALLRSGRLDRKIEFPMPNEEA 378
Query: 260 KRLVFSTITAKMNLSDEVDLEDYVARPDRISGADINAICQEAGMHAVRENRYIVLPKDFE 319
+ + + KMN+S +V+ E+ D +GA A+C EAGM A+R + +D+
Sbjct: 379 RARIMQIHSRKMNVSPDVNYEELARCTDDFNGAQCKAVCVEAGMIALRRGATELTHEDYM 438
Query: 320 KG 321
+G
Sbjct: 439 EG 440
Score = 143 (55.4 bits), Expect = 6.4e-07, P = 6.4e-07
Identities = 29/63 (46%), Positives = 40/63 (63%)
Query: 169 EVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLVFSTITAKMNFMLNIGNLQVIM 228
+VI ATNR D LDPALLR GRLDRKIEFP+P+ + + + KMN ++ ++
Sbjct: 344 KVIAATNRVDILDPALLRSGRLDRKIEFPMPNEEARARIMQIHSRKMNVSPDVNYEELAR 403
Query: 229 ATN 231
T+
Sbjct: 404 CTD 406
>UNIPROTKB|F1PBK7 [details] [associations]
symbol:PSMC3 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0030163 "protein catabolic process" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737
GO:GO:0030163 GO:GO:0017111 GeneTree:ENSGT00560000077230
TIGRFAMs:TIGR01242 OMA:GALMYGP EMBL:AAEX03011486
Ensembl:ENSCAFT00000013842 Uniprot:F1PBK7
Length = 439
Score = 397 (144.8 bits), Expect = 6.3e-37, P = 6.3e-37
Identities = 80/179 (44%), Positives = 109/179 (60%)
Query: 2 LLCTSFDTELVTAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENSPXXXXXXXXXXXXTK 61
LL + + F+++ G + VQ ++G+G ++VRD F LAKE +P TK
Sbjct: 235 LLARACAAQTKATFLKLAGPQLVQMFIGDGAKLVRDAFALAKEKAPSIIFIDELDAIGTK 294
Query: 62 RFDAQTGADREVQRILLELLNQMDGFDQTTNVKVIMATNRADTLDPALLRPGRLDRKIEF 121
RFD++ DREVQR +LELLNQ+DGF T VKVI ATNR D LDPALLR GRLDRKIEF
Sbjct: 295 RFDSEKAGDREVQRTMLELLNQLDGFQPNTQVKVIAATNRVDILDPALLRSGRLDRKIEF 354
Query: 122 PLPDRRQKRLVFSTITAKMNLSDEVDLEDYVARPDRISGADINAICQEV-IMATNRADT 179
P+P+ + + + KMN+S +V+ E+ D +GA A+C E ++A R T
Sbjct: 355 PMPNEEARARIMQIHSRKMNVSPDVNYEELARCTDDFNGAQCKAVCVEAGMIALRRGAT 413
Score = 225 (84.3 bits), Expect = 1.9e-16, P = 1.9e-16
Identities = 49/122 (40%), Positives = 70/122 (57%)
Query: 200 DRRQKRLVFSTITAKMNFMLNIGNLQVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQ 259
DR +R + + F N ++VI ATNR D LDPALLR GRLDRKIEFP+P+
Sbjct: 303 DREVQRTMLELLNQLDGFQPNT-QVKVIAATNRVDILDPALLRSGRLDRKIEFPMPNEEA 361
Query: 260 KRLVFSTITAKMNLSDEVDLEDYVARPDRISGADINAICQEAGMHAVRENRYIVLPKDFE 319
+ + + KMN+S +V+ E+ D +GA A+C EAGM A+R + +D+
Sbjct: 362 RARIMQIHSRKMNVSPDVNYEELARCTDDFNGAQCKAVCVEAGMIALRRGATELTHEDYM 421
Query: 320 KG 321
+G
Sbjct: 422 EG 423
Score = 143 (55.4 bits), Expect = 5.9e-07, P = 5.9e-07
Identities = 29/63 (46%), Positives = 40/63 (63%)
Query: 169 EVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLVFSTITAKMNFMLNIGNLQVIM 228
+VI ATNR D LDPALLR GRLDRKIEFP+P+ + + + KMN ++ ++
Sbjct: 327 KVIAATNRVDILDPALLRSGRLDRKIEFPMPNEEARARIMQIHSRKMNVSPDVNYEELAR 386
Query: 229 ATN 231
T+
Sbjct: 387 CTD 389
>UNIPROTKB|E9PM69 [details] [associations]
symbol:PSMC3 "26S protease regulatory subunit 6A"
species:9606 "Homo sapiens" [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0030163
GO:GO:0017111 EMBL:AC090559 TIGRFAMs:TIGR01242 HGNC:HGNC:9549
ChiTaRS:PSMC3 IPI:IPI00979423 ProteinModelPortal:E9PM69 SMR:E9PM69
PRIDE:E9PM69 Ensembl:ENST00000530912 ArrayExpress:E9PM69
Bgee:E9PM69 Uniprot:E9PM69
Length = 397
Score = 397 (144.8 bits), Expect = 6.3e-37, P = 6.3e-37
Identities = 80/179 (44%), Positives = 109/179 (60%)
Query: 2 LLCTSFDTELVTAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENSPXXXXXXXXXXXXTK 61
LL + + F+++ G + VQ ++G+G ++VRD F LAKE +P TK
Sbjct: 193 LLARACAAQTKATFLKLAGPQLVQMFIGDGAKLVRDAFALAKEKAPSIIFIDELDAIGTK 252
Query: 62 RFDAQTGADREVQRILLELLNQMDGFDQTTNVKVIMATNRADTLDPALLRPGRLDRKIEF 121
RFD++ DREVQR +LELLNQ+DGF T VKVI ATNR D LDPALLR GRLDRKIEF
Sbjct: 253 RFDSEKAGDREVQRTMLELLNQLDGFQPNTQVKVIAATNRVDILDPALLRSGRLDRKIEF 312
Query: 122 PLPDRRQKRLVFSTITAKMNLSDEVDLEDYVARPDRISGADINAICQEV-IMATNRADT 179
P+P+ + + + KMN+S +V+ E+ D +GA A+C E ++A R T
Sbjct: 313 PMPNEEARARIMQIHSRKMNVSPDVNYEELARCTDDFNGAQCKAVCVEAGMIALRRGAT 371
Score = 225 (84.3 bits), Expect = 1.3e-16, P = 1.3e-16
Identities = 49/122 (40%), Positives = 70/122 (57%)
Query: 200 DRRQKRLVFSTITAKMNFMLNIGNLQVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQ 259
DR +R + + F N ++VI ATNR D LDPALLR GRLDRKIEFP+P+
Sbjct: 261 DREVQRTMLELLNQLDGFQPNT-QVKVIAATNRVDILDPALLRSGRLDRKIEFPMPNEEA 319
Query: 260 KRLVFSTITAKMNLSDEVDLEDYVARPDRISGADINAICQEAGMHAVRENRYIVLPKDFE 319
+ + + KMN+S +V+ E+ D +GA A+C EAGM A+R + +D+
Sbjct: 320 RARIMQIHSRKMNVSPDVNYEELARCTDDFNGAQCKAVCVEAGMIALRRGATELTHEDYM 379
Query: 320 KG 321
+G
Sbjct: 380 EG 381
Score = 143 (55.4 bits), Expect = 4.9e-07, P = 4.9e-07
Identities = 29/63 (46%), Positives = 40/63 (63%)
Query: 169 EVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLVFSTITAKMNFMLNIGNLQVIM 228
+VI ATNR D LDPALLR GRLDRKIEFP+P+ + + + KMN ++ ++
Sbjct: 285 KVIAATNRVDILDPALLRSGRLDRKIEFPMPNEEARARIMQIHSRKMNVSPDVNYEELAR 344
Query: 229 ATN 231
T+
Sbjct: 345 CTD 347
>UNIPROTKB|P17980 [details] [associations]
symbol:PSMC3 "26S protease regulatory subunit 6A"
species:9606 "Homo sapiens" [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0019048 "virus-host interaction" evidence=IEA] [GO:0001824
"blastocyst development" evidence=IEA] [GO:0048471 "perinuclear
region of cytoplasm" evidence=IEA] [GO:0000932 "cytoplasmic mRNA
processing body" evidence=ISS] [GO:0022624 "proteasome accessory
complex" evidence=ISS] [GO:0003713 "transcription coactivator
activity" evidence=TAS] [GO:0003714 "transcription corepressor
activity" evidence=TAS] [GO:0000502 "proteasome complex"
evidence=TAS] [GO:0000075 "cell cycle checkpoint" evidence=TAS]
[GO:0000082 "G1/S transition of mitotic cell cycle" evidence=TAS]
[GO:0000084 "S phase of mitotic cell cycle" evidence=TAS]
[GO:0000209 "protein polyubiquitination" evidence=TAS] [GO:0000216
"M/G1 transition of mitotic cell cycle" evidence=TAS] [GO:0000278
"mitotic cell cycle" evidence=TAS] [GO:0002474 "antigen processing
and presentation of peptide antigen via MHC class I" evidence=TAS]
[GO:0002479 "antigen processing and presentation of exogenous
peptide antigen via MHC class I, TAP-dependent" evidence=TAS]
[GO:0005654 "nucleoplasm" evidence=TAS] [GO:0005829 "cytosol"
evidence=TAS] [GO:0006521 "regulation of cellular amino acid
metabolic process" evidence=TAS] [GO:0006915 "apoptotic process"
evidence=TAS] [GO:0006977 "DNA damage response, signal transduction
by p53 class mediator resulting in cell cycle arrest" evidence=TAS]
[GO:0010467 "gene expression" evidence=TAS] [GO:0016032 "viral
reproduction" evidence=TAS] [GO:0016070 "RNA metabolic process"
evidence=TAS] [GO:0016071 "mRNA metabolic process" evidence=TAS]
[GO:0031145 "anaphase-promoting complex-dependent proteasomal
ubiquitin-dependent protein catabolic process" evidence=TAS]
[GO:0034641 "cellular nitrogen compound metabolic process"
evidence=TAS] [GO:0042590 "antigen processing and presentation of
exogenous peptide antigen via MHC class I" evidence=TAS]
[GO:0042981 "regulation of apoptotic process" evidence=TAS]
[GO:0044281 "small molecule metabolic process" evidence=TAS]
[GO:0051436 "negative regulation of ubiquitin-protein ligase
activity involved in mitotic cell cycle" evidence=TAS] [GO:0051437
"positive regulation of ubiquitin-protein ligase activity involved
in mitotic cell cycle" evidence=TAS] [GO:0051439 "regulation of
ubiquitin-protein ligase activity involved in mitotic cell cycle"
evidence=TAS] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005737 "cytoplasm"
evidence=IDA] Reactome:REACT_13505 Reactome:REACT_578
Reactome:REACT_71 Reactome:REACT_21257 Reactome:REACT_6850
Reactome:REACT_111217 InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005829 GO:GO:0005524 Reactome:REACT_111102
Reactome:REACT_116125 Reactome:REACT_6900 GO:GO:0003714
GO:GO:0006915 GO:GO:0010467 GO:GO:0016071 Reactome:REACT_115566
GO:GO:0019048 GO:GO:0005654 GO:GO:0002479 GO:GO:0016032
EMBL:CH471064 Reactome:REACT_21300 GO:GO:0006977 GO:GO:0042981
GO:GO:0044281 GO:GO:0000082 GO:GO:0003713 GO:GO:0051436
GO:GO:0017111 GO:GO:0000932 GO:GO:0000216 GO:GO:0000209
GO:GO:0000084 GO:GO:0031145 GO:GO:0051437 GO:GO:0006521
GO:GO:0001824 Reactome:REACT_383 eggNOG:COG1222 TIGRFAMs:TIGR01242
HOVERGEN:HBG000109 KO:K03065 GO:GO:0022624 OMA:GALMYGP
EMBL:AK313518 EMBL:BC008713 EMBL:BC073165 EMBL:BC106920
EMBL:BC107804 EMBL:AK222485 EMBL:M34079 EMBL:CR456731
IPI:IPI00018398 PIR:A34832 RefSeq:NP_002795.2 UniGene:Hs.250758
ProteinModelPortal:P17980 SMR:P17980 DIP:DIP-27555N IntAct:P17980
MINT:MINT-1149785 STRING:P17980 PhosphoSite:P17980 DMDM:20532406
REPRODUCTION-2DPAGE:IPI00018398 PaxDb:P17980 PeptideAtlas:P17980
PRIDE:P17980 DNASU:5702 Ensembl:ENST00000298852 GeneID:5702
KEGG:hsa:5702 UCSC:uc001nfh.2 CTD:5702 GeneCards:GC11M047440
HGNC:HGNC:9549 HPA:HPA006065 MIM:186852 neXtProt:NX_P17980
PharmGKB:PA33894 InParanoid:P17980 OrthoDB:EOG46143Z
PhylomeDB:P17980 ChiTaRS:PSMC3 GenomeRNAi:5702 NextBio:22154
PMAP-CutDB:P17980 ArrayExpress:P17980 Bgee:P17980 CleanEx:HS_PSMC3
Genevestigator:P17980 GermOnline:ENSG00000165916 Uniprot:P17980
Length = 439
Score = 397 (144.8 bits), Expect = 6.3e-37, P = 6.3e-37
Identities = 80/179 (44%), Positives = 109/179 (60%)
Query: 2 LLCTSFDTELVTAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENSPXXXXXXXXXXXXTK 61
LL + + F+++ G + VQ ++G+G ++VRD F LAKE +P TK
Sbjct: 235 LLARACAAQTKATFLKLAGPQLVQMFIGDGAKLVRDAFALAKEKAPSIIFIDELDAIGTK 294
Query: 62 RFDAQTGADREVQRILLELLNQMDGFDQTTNVKVIMATNRADTLDPALLRPGRLDRKIEF 121
RFD++ DREVQR +LELLNQ+DGF T VKVI ATNR D LDPALLR GRLDRKIEF
Sbjct: 295 RFDSEKAGDREVQRTMLELLNQLDGFQPNTQVKVIAATNRVDILDPALLRSGRLDRKIEF 354
Query: 122 PLPDRRQKRLVFSTITAKMNLSDEVDLEDYVARPDRISGADINAICQEV-IMATNRADT 179
P+P+ + + + KMN+S +V+ E+ D +GA A+C E ++A R T
Sbjct: 355 PMPNEEARARIMQIHSRKMNVSPDVNYEELARCTDDFNGAQCKAVCVEAGMIALRRGAT 413
Score = 225 (84.3 bits), Expect = 1.9e-16, P = 1.9e-16
Identities = 49/122 (40%), Positives = 70/122 (57%)
Query: 200 DRRQKRLVFSTITAKMNFMLNIGNLQVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQ 259
DR +R + + F N ++VI ATNR D LDPALLR GRLDRKIEFP+P+
Sbjct: 303 DREVQRTMLELLNQLDGFQPNT-QVKVIAATNRVDILDPALLRSGRLDRKIEFPMPNEEA 361
Query: 260 KRLVFSTITAKMNLSDEVDLEDYVARPDRISGADINAICQEAGMHAVRENRYIVLPKDFE 319
+ + + KMN+S +V+ E+ D +GA A+C EAGM A+R + +D+
Sbjct: 362 RARIMQIHSRKMNVSPDVNYEELARCTDDFNGAQCKAVCVEAGMIALRRGATELTHEDYM 421
Query: 320 KG 321
+G
Sbjct: 422 EG 423
Score = 143 (55.4 bits), Expect = 5.9e-07, P = 5.9e-07
Identities = 29/63 (46%), Positives = 40/63 (63%)
Query: 169 EVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLVFSTITAKMNFMLNIGNLQVIM 228
+VI ATNR D LDPALLR GRLDRKIEFP+P+ + + + KMN ++ ++
Sbjct: 327 KVIAATNRVDILDPALLRSGRLDRKIEFPMPNEEARARIMQIHSRKMNVSPDVNYEELAR 386
Query: 229 ATN 231
T+
Sbjct: 387 CTD 389
>UNIPROTKB|F1SID4 [details] [associations]
symbol:PSMC3 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0022624 "proteasome accessory complex" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0001824 "blastocyst development" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0030163 "protein
catabolic process" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0030163
GO:GO:0017111 GeneTree:ENSGT00560000077230 GO:GO:0001824
TIGRFAMs:TIGR01242 OMA:GALMYGP EMBL:CU856312
Ensembl:ENSSSCT00000014459 Uniprot:F1SID4
Length = 446
Score = 397 (144.8 bits), Expect = 6.3e-37, P = 6.3e-37
Identities = 80/179 (44%), Positives = 109/179 (60%)
Query: 2 LLCTSFDTELVTAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENSPXXXXXXXXXXXXTK 61
LL + + F+++ G + VQ ++G+G ++VRD F LAKE +P TK
Sbjct: 242 LLARACAAQTKATFLKLAGPQLVQMFIGDGAKLVRDAFALAKEKAPSIIFIDELDAIGTK 301
Query: 62 RFDAQTGADREVQRILLELLNQMDGFDQTTNVKVIMATNRADTLDPALLRPGRLDRKIEF 121
RFD++ DREVQR +LELLNQ+DGF T VKVI ATNR D LDPALLR GRLDRKIEF
Sbjct: 302 RFDSEKAGDREVQRTMLELLNQLDGFQPNTQVKVIAATNRVDILDPALLRSGRLDRKIEF 361
Query: 122 PLPDRRQKRLVFSTITAKMNLSDEVDLEDYVARPDRISGADINAICQEV-IMATNRADT 179
P+P+ + + + KMN+S +V+ E+ D +GA A+C E ++A R T
Sbjct: 362 PMPNEEARARIMQIHSRKMNVSPDVNYEELARCTDDFNGAQCKAVCVEAGMIALRRGAT 420
Score = 225 (84.3 bits), Expect = 2.0e-16, P = 2.0e-16
Identities = 49/122 (40%), Positives = 70/122 (57%)
Query: 200 DRRQKRLVFSTITAKMNFMLNIGNLQVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQ 259
DR +R + + F N ++VI ATNR D LDPALLR GRLDRKIEFP+P+
Sbjct: 310 DREVQRTMLELLNQLDGFQPNT-QVKVIAATNRVDILDPALLRSGRLDRKIEFPMPNEEA 368
Query: 260 KRLVFSTITAKMNLSDEVDLEDYVARPDRISGADINAICQEAGMHAVRENRYIVLPKDFE 319
+ + + KMN+S +V+ E+ D +GA A+C EAGM A+R + +D+
Sbjct: 369 RARIMQIHSRKMNVSPDVNYEELARCTDDFNGAQCKAVCVEAGMIALRRGATELTHEDYM 428
Query: 320 KG 321
+G
Sbjct: 429 EG 430
Score = 143 (55.4 bits), Expect = 6.1e-07, P = 6.1e-07
Identities = 29/63 (46%), Positives = 40/63 (63%)
Query: 169 EVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLVFSTITAKMNFMLNIGNLQVIM 228
+VI ATNR D LDPALLR GRLDRKIEFP+P+ + + + KMN ++ ++
Sbjct: 334 KVIAATNRVDILDPALLRSGRLDRKIEFPMPNEEARARIMQIHSRKMNVSPDVNYEELAR 393
Query: 229 ATN 231
T+
Sbjct: 394 CTD 396
>MGI|MGI:1098754 [details] [associations]
symbol:Psmc3 "proteasome (prosome, macropain) 26S subunit,
ATPase 3" species:10090 "Mus musculus" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0000502 "proteasome complex"
evidence=IEA] [GO:0001824 "blastocyst development" evidence=IMP]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=ISO] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0022624
"proteasome accessory complex" evidence=IDA] [GO:0030163 "protein
catabolic process" evidence=IEA] [GO:0048471 "perinuclear region of
cytoplasm" evidence=ISO] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 MGI:MGI:1098754 GO:GO:0005524 GO:GO:0005634
GO:GO:0030163 GO:GO:0017111 GO:GO:0000932
GeneTree:ENSGT00560000077230 GO:GO:0001824 eggNOG:COG1222
TIGRFAMs:TIGR01242 HOVERGEN:HBG000109 KO:K03065 GO:GO:0022624
CTD:5702 ChiTaRS:PSMC3 EMBL:D49686 EMBL:AB040858 EMBL:AY902337
EMBL:AL691439 EMBL:BC005783 IPI:IPI00133206 RefSeq:NP_032974.2
UniGene:Mm.289832 ProteinModelPortal:O88685 SMR:O88685
IntAct:O88685 STRING:O88685 PhosphoSite:O88685 PaxDb:O88685
PRIDE:O88685 Ensembl:ENSMUST00000067663 GeneID:19182 KEGG:mmu:19182
NextBio:295874 Bgee:O88685 Genevestigator:O88685
GermOnline:ENSMUSG00000002102 Uniprot:O88685
Length = 442
Score = 397 (144.8 bits), Expect = 6.3e-37, P = 6.3e-37
Identities = 80/179 (44%), Positives = 109/179 (60%)
Query: 2 LLCTSFDTELVTAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENSPXXXXXXXXXXXXTK 61
LL + + F+++ G + VQ ++G+G ++VRD F LAKE +P TK
Sbjct: 238 LLARACAAQTKATFLKLAGPQLVQMFIGDGAKLVRDAFALAKEKAPSIIFIDELDAIGTK 297
Query: 62 RFDAQTGADREVQRILLELLNQMDGFDQTTNVKVIMATNRADTLDPALLRPGRLDRKIEF 121
RFD++ DREVQR +LELLNQ+DGF T VKVI ATNR D LDPALLR GRLDRKIEF
Sbjct: 298 RFDSEKAGDREVQRTMLELLNQLDGFQPNTQVKVIAATNRVDILDPALLRSGRLDRKIEF 357
Query: 122 PLPDRRQKRLVFSTITAKMNLSDEVDLEDYVARPDRISGADINAICQEV-IMATNRADT 179
P+P+ + + + KMN+S +V+ E+ D +GA A+C E ++A R T
Sbjct: 358 PMPNEEARARIMQIHSRKMNVSPDVNYEELARCTDDFNGAQCKAVCVEAGMIALRRGAT 416
Score = 225 (84.3 bits), Expect = 2.0e-16, P = 2.0e-16
Identities = 49/122 (40%), Positives = 70/122 (57%)
Query: 200 DRRQKRLVFSTITAKMNFMLNIGNLQVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQ 259
DR +R + + F N ++VI ATNR D LDPALLR GRLDRKIEFP+P+
Sbjct: 306 DREVQRTMLELLNQLDGFQPNT-QVKVIAATNRVDILDPALLRSGRLDRKIEFPMPNEEA 364
Query: 260 KRLVFSTITAKMNLSDEVDLEDYVARPDRISGADINAICQEAGMHAVRENRYIVLPKDFE 319
+ + + KMN+S +V+ E+ D +GA A+C EAGM A+R + +D+
Sbjct: 365 RARIMQIHSRKMNVSPDVNYEELARCTDDFNGAQCKAVCVEAGMIALRRGATELTHEDYM 424
Query: 320 KG 321
+G
Sbjct: 425 EG 426
Score = 143 (55.4 bits), Expect = 6.0e-07, P = 6.0e-07
Identities = 29/63 (46%), Positives = 40/63 (63%)
Query: 169 EVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLVFSTITAKMNFMLNIGNLQVIM 228
+VI ATNR D LDPALLR GRLDRKIEFP+P+ + + + KMN ++ ++
Sbjct: 330 KVIAATNRVDILDPALLRSGRLDRKIEFPMPNEEARARIMQIHSRKMNVSPDVNYEELAR 389
Query: 229 ATN 231
T+
Sbjct: 390 CTD 392
>RGD|61905 [details] [associations]
symbol:Psmc3 "proteasome (prosome, macropain) 26S subunit, ATPase
3" species:10116 "Rattus norvegicus" [GO:0000932 "cytoplasmic mRNA
processing body" evidence=ISS] [GO:0001824 "blastocyst development"
evidence=IEA;ISO] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA;ISO] [GO:0005737 "cytoplasm" evidence=IEA;ISO;IDA]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
[GO:0022624 "proteasome accessory complex" evidence=IEA;ISO;ISS]
[GO:0030163 "protein catabolic process" evidence=IEA] [GO:0048471
"perinuclear region of cytoplasm" evidence=IDA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 RGD:61905 GO:GO:0005524
GO:GO:0005634 GO:GO:0048471 GO:GO:0030163 GO:GO:0017111
GO:GO:0000932 eggNOG:COG1222 TIGRFAMs:TIGR01242 HOVERGEN:HBG000109
KO:K03065 GO:GO:0022624 CTD:5702 EMBL:D83522 EMBL:U77918
IPI:IPI00421528 RefSeq:NP_113783.1 UniGene:Rn.11173
ProteinModelPortal:Q63569 IntAct:Q63569 STRING:Q63569
PhosphoSite:Q63569 PRIDE:Q63569 GeneID:29677 KEGG:rno:29677
UCSC:RGD:61905 NextBio:610019 ArrayExpress:Q63569
Genevestigator:Q63569 GermOnline:ENSRNOG00000011414 Uniprot:Q63569
Length = 439
Score = 397 (144.8 bits), Expect = 6.3e-37, P = 6.3e-37
Identities = 80/179 (44%), Positives = 109/179 (60%)
Query: 2 LLCTSFDTELVTAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENSPXXXXXXXXXXXXTK 61
LL + + F+++ G + VQ ++G+G ++VRD F LAKE +P TK
Sbjct: 235 LLARACAAQTKATFLKLAGPQLVQMFIGDGAKLVRDAFALAKEKAPSIIFIDELDAIGTK 294
Query: 62 RFDAQTGADREVQRILLELLNQMDGFDQTTNVKVIMATNRADTLDPALLRPGRLDRKIEF 121
RFD++ DREVQR +LELLNQ+DGF T VKVI ATNR D LDPALLR GRLDRKIEF
Sbjct: 295 RFDSEKAGDREVQRTMLELLNQLDGFQPNTQVKVIAATNRVDILDPALLRSGRLDRKIEF 354
Query: 122 PLPDRRQKRLVFSTITAKMNLSDEVDLEDYVARPDRISGADINAICQEV-IMATNRADT 179
P+P+ + + + KMN+S +V+ E+ D +GA A+C E ++A R T
Sbjct: 355 PMPNEEARARIMQIHSRKMNVSPDVNYEELARCTDDFNGAQCKAVCVEAGMIALRRGAT 413
Score = 225 (84.3 bits), Expect = 1.9e-16, P = 1.9e-16
Identities = 49/122 (40%), Positives = 70/122 (57%)
Query: 200 DRRQKRLVFSTITAKMNFMLNIGNLQVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQ 259
DR +R + + F N ++VI ATNR D LDPALLR GRLDRKIEFP+P+
Sbjct: 303 DREVQRTMLELLNQLDGFQPNT-QVKVIAATNRVDILDPALLRSGRLDRKIEFPMPNEEA 361
Query: 260 KRLVFSTITAKMNLSDEVDLEDYVARPDRISGADINAICQEAGMHAVRENRYIVLPKDFE 319
+ + + KMN+S +V+ E+ D +GA A+C EAGM A+R + +D+
Sbjct: 362 RARIMQIHSRKMNVSPDVNYEELARCTDDFNGAQCKAVCVEAGMIALRRGATELTHEDYM 421
Query: 320 KG 321
+G
Sbjct: 422 EG 423
Score = 143 (55.4 bits), Expect = 5.9e-07, P = 5.9e-07
Identities = 29/63 (46%), Positives = 40/63 (63%)
Query: 169 EVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLVFSTITAKMNFMLNIGNLQVIM 228
+VI ATNR D LDPALLR GRLDRKIEFP+P+ + + + KMN ++ ++
Sbjct: 327 KVIAATNRVDILDPALLRSGRLDRKIEFPMPNEEARARIMQIHSRKMNVSPDVNYEELAR 386
Query: 229 ATN 231
T+
Sbjct: 387 CTD 389
>UNIPROTKB|Q6P6U2 [details] [associations]
symbol:Psmc3 "26S protease regulatory subunit 6A"
species:10116 "Rattus norvegicus" [GO:0001824 "blastocyst
development" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
[GO:0030163 "protein catabolic process" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
RGD:61905 GO:GO:0005524 GO:GO:0005737 GO:GO:0030163 GO:GO:0000502
GO:GO:0017111 GeneTree:ENSGT00560000077230 EMBL:CH473949
TIGRFAMs:TIGR01242 HOVERGEN:HBG000109 HOGENOM:HOG000225143
IPI:IPI00421528 UniGene:Rn.11173 EMBL:BC062019 SMR:Q6P6U2
IntAct:Q6P6U2 STRING:Q6P6U2 Ensembl:ENSRNOT00000015757
Genevestigator:Q6P6U2 Uniprot:Q6P6U2
Length = 442
Score = 397 (144.8 bits), Expect = 6.3e-37, P = 6.3e-37
Identities = 80/179 (44%), Positives = 109/179 (60%)
Query: 2 LLCTSFDTELVTAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENSPXXXXXXXXXXXXTK 61
LL + + F+++ G + VQ ++G+G ++VRD F LAKE +P TK
Sbjct: 238 LLARACAAQTKATFLKLAGPQLVQMFIGDGAKLVRDAFALAKEKAPSIIFIDELDAIGTK 297
Query: 62 RFDAQTGADREVQRILLELLNQMDGFDQTTNVKVIMATNRADTLDPALLRPGRLDRKIEF 121
RFD++ DREVQR +LELLNQ+DGF T VKVI ATNR D LDPALLR GRLDRKIEF
Sbjct: 298 RFDSEKAGDREVQRTMLELLNQLDGFQPNTQVKVIAATNRVDILDPALLRSGRLDRKIEF 357
Query: 122 PLPDRRQKRLVFSTITAKMNLSDEVDLEDYVARPDRISGADINAICQEV-IMATNRADT 179
P+P+ + + + KMN+S +V+ E+ D +GA A+C E ++A R T
Sbjct: 358 PMPNEEARARIMQIHSRKMNVSPDVNYEELARCTDDFNGAQCKAVCVEAGMIALRRGAT 416
Score = 225 (84.3 bits), Expect = 2.0e-16, P = 2.0e-16
Identities = 49/122 (40%), Positives = 70/122 (57%)
Query: 200 DRRQKRLVFSTITAKMNFMLNIGNLQVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQ 259
DR +R + + F N ++VI ATNR D LDPALLR GRLDRKIEFP+P+
Sbjct: 306 DREVQRTMLELLNQLDGFQPNT-QVKVIAATNRVDILDPALLRSGRLDRKIEFPMPNEEA 364
Query: 260 KRLVFSTITAKMNLSDEVDLEDYVARPDRISGADINAICQEAGMHAVRENRYIVLPKDFE 319
+ + + KMN+S +V+ E+ D +GA A+C EAGM A+R + +D+
Sbjct: 365 RARIMQIHSRKMNVSPDVNYEELARCTDDFNGAQCKAVCVEAGMIALRRGATELTHEDYM 424
Query: 320 KG 321
+G
Sbjct: 425 EG 426
Score = 143 (55.4 bits), Expect = 6.0e-07, P = 6.0e-07
Identities = 29/63 (46%), Positives = 40/63 (63%)
Query: 169 EVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLVFSTITAKMNFMLNIGNLQVIM 228
+VI ATNR D LDPALLR GRLDRKIEFP+P+ + + + KMN ++ ++
Sbjct: 330 KVIAATNRVDILDPALLRSGRLDRKIEFPMPNEEARARIMQIHSRKMNVSPDVNYEELAR 389
Query: 229 ATN 231
T+
Sbjct: 390 CTD 392
>UNIPROTKB|J9NWA6 [details] [associations]
symbol:LOC100687152 "Uncharacterized protein" species:9615
"Canis lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0030163 "protein catabolic process" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005737 GO:GO:0030163
GO:GO:0017111 GeneTree:ENSGT00560000077230 TIGRFAMs:TIGR01242
EMBL:AAEX03026457 Ensembl:ENSCAFT00000026372 OMA:REAVEQP
Uniprot:J9NWA6
Length = 434
Score = 395 (144.1 bits), Expect = 1.0e-36, P = 1.0e-36
Identities = 79/180 (43%), Positives = 108/180 (60%)
Query: 2 LLCTSFDTELVTAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENSPXXXXXXXXXXXXTK 61
LL + + F+++ G + VQ ++G+G ++VRD F LAKE +P TK
Sbjct: 230 LLARACAAQTKATFLKLAGPQLVQMFIGDGAKLVRDAFALAKEKAPSIIFIDELDATGTK 289
Query: 62 RFDAQTGADREVQRILLELLNQMDGFDQTTNVKVIMATNRADTLDPALLRPGRLDRKIEF 121
RFD++ DREVQR +LELLNQ+DGF T VKVI ATNR D LDPALLR GRLD+KIEF
Sbjct: 290 RFDSEKAGDREVQRTMLELLNQLDGFQPNTQVKVIAATNRVDILDPALLRSGRLDQKIEF 349
Query: 122 PLPDRRQKRLVFSTITAKMNLSDEVDLEDYVARPDRISGADINAICQEVIMATNRADTLD 181
P+P+ + + + KMN+S +V+ E+ D +GA A+C E M R T +
Sbjct: 350 PMPNEEARARIMQIHSRKMNVSPDVNYEELARCMDDFNGAQCKAVCVEAGMIALRRGTTE 409
Score = 220 (82.5 bits), Expect = 7.4e-16, P = 7.4e-16
Identities = 48/122 (39%), Positives = 70/122 (57%)
Query: 200 DRRQKRLVFSTITAKMNFMLNIGNLQVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQ 259
DR +R + + F N ++VI ATNR D LDPALLR GRLD+KIEFP+P+
Sbjct: 298 DREVQRTMLELLNQLDGFQPNT-QVKVIAATNRVDILDPALLRSGRLDQKIEFPMPNEEA 356
Query: 260 KRLVFSTITAKMNLSDEVDLEDYVARPDRISGADINAICQEAGMHAVRENRYIVLPKDFE 319
+ + + KMN+S +V+ E+ D +GA A+C EAGM A+R + +D+
Sbjct: 357 RARIMQIHSRKMNVSPDVNYEELARCMDDFNGAQCKAVCVEAGMIALRRGTTELTHEDYM 416
Query: 320 KG 321
+G
Sbjct: 417 EG 418
Score = 138 (53.6 bits), Expect = 2.1e-06, P = 2.1e-06
Identities = 27/48 (56%), Positives = 34/48 (70%)
Query: 169 EVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLVFSTITAKMN 216
+VI ATNR D LDPALLR GRLD+KIEFP+P+ + + + KMN
Sbjct: 322 KVIAATNRVDILDPALLRSGRLDQKIEFPMPNEEARARIMQIHSRKMN 369
>ASPGD|ASPL0000032311 [details] [associations]
symbol:AN5747 species:162425 "Emericella nidulans"
[GO:0005524 "ATP binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0070682
"proteasome regulatory particle assembly" evidence=IEA] [GO:0032968
"positive regulation of transcription elongation from RNA
polymerase II promoter" evidence=IEA] [GO:0045899 "positive
regulation of RNA polymerase II transcriptional preinitiation
complex assembly" evidence=IEA] [GO:0030433 "ER-associated protein
catabolic process" evidence=IEA] [GO:0006289 "nucleotide-excision
repair" evidence=IEA] [GO:0019904 "protein domain specific binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0005829
"cytosol" evidence=IEA] [GO:0008540 "proteasome regulatory
particle, base subcomplex" evidence=IEA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GO:GO:0005737 EMBL:BN001305 GO:GO:0030163 GO:GO:0017111
TIGRFAMs:TIGR01242 HOGENOM:HOG000225143 OMA:EHKEVES
EnsemblFungi:CADANIAT00003315 Uniprot:C8VFJ3
Length = 393
Score = 364 (133.2 bits), Expect = 2.2e-36, Sum P(2) = 2.2e-36
Identities = 73/168 (43%), Positives = 102/168 (60%)
Query: 2 LLCTSFDTELVTAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENSPXXXXXXXXXXXXTK 61
LL + + + T F++VV S V KY+GE R++R++F AKE+ P +
Sbjct: 186 LLARAVASSMETNFLKVVSSAIVDKYIGESARLIREMFGYAKEHEPCIIFMDEIDAIGGR 245
Query: 62 RFDAQTGADREVQRILLELLNQMDGFDQTTNVKVIMATNRADTLDPALLRPGRLDRKIEF 121
RF T ADRE+QR L+ELLNQ+DGFD K+IMATNR DTLDPALLR GRLDRKIE
Sbjct: 246 RFSEGTSADREIQRTLMELLNQLDGFDYLGKTKIIMATNRPDTLDPALLRAGRLDRKIEI 305
Query: 122 PLPDRRQKRLVFSTITAKMNLSDEVDLEDYVARPDRISGADINAICQE 169
PLP+ + + ++ + + ++D E V D ++GAD+ + E
Sbjct: 306 PLPNEVGRLEILKIHSSTVQMEGDIDFESVVKMSDGLNGADLRNVVTE 353
Score = 225 (84.3 bits), Expect = 1.3e-16, P = 1.3e-16
Identities = 47/127 (37%), Positives = 73/127 (57%)
Query: 200 DRRQKRLVFSTITAKMNFMLNIGNLQVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQ 259
DR +R + + F +G ++IMATNR DTLDPALLR GRLDRKIE PLP+
Sbjct: 254 DREIQRTLMELLNQLDGFDY-LGKTKIIMATNRPDTLDPALLRAGRLDRKIEIPLPNEVG 312
Query: 260 KRLVFSTITAKMNLSDEVDLEDYVARPDRISGADINAICQEAGMHAVRENRYIVLPKDFE 319
+ + ++ + + ++D E V D ++GAD+ + EAG+ A+++ R + DF
Sbjct: 313 RLEILKIHSSTVQMEGDIDFESVVKMSDGLNGADLRNVVTEAGLFAIKDYRDAINQDDFN 372
Query: 320 KGYKKCA 326
+ +K A
Sbjct: 373 RAVRKVA 379
Score = 139 (54.0 bits), Expect = 4.6e-07, Sum P(2) = 4.6e-07
Identities = 36/76 (47%), Positives = 46/76 (60%)
Query: 169 EVIMATNRADTLDPALLRPGRLDRKIEFPLPDR--RQKRLVFSTITAKMNFMLNIGNLQV 226
++IMATNR DTLDPALLR GRLDRKIE PLP+ R + L + T +M G++
Sbjct: 278 KIIMATNRPDTLDPALLRAGRLDRKIEIPLPNEVGRLEILKIHSSTVQME-----GDIDF 332
Query: 227 IMATNRADTLDPALLR 242
+D L+ A LR
Sbjct: 333 ESVVKMSDGLNGADLR 348
Score = 44 (20.5 bits), Expect = 2.2e-36, Sum P(2) = 2.2e-36
Identities = 11/39 (28%), Positives = 20/39 (51%)
Query: 326 AGMHAVRENRYIVLPKDFEKGYKN--NTKKDESEHEFYK 362
AG+ A+++ R + DF + + KK E + E+ K
Sbjct: 354 AGLFAIKDYRDAINQDDFNRAVRKVAEAKKLEGKLEYQK 392
>CGD|CAL0005689 [details] [associations]
symbol:RPT1 species:5476 "Candida albicans" [GO:0005634
"nucleus" evidence=IEA] [GO:0005829 "cytosol" evidence=IEA]
[GO:0008540 "proteasome regulatory particle, base subcomplex"
evidence=IEA] [GO:0070682 "proteasome regulatory particle assembly"
evidence=IEA] [GO:0006511 "ubiquitin-dependent protein catabolic
process" evidence=IEA] [GO:0045899 "positive regulation of RNA
polymerase II transcriptional preinitiation complex assembly"
evidence=IEA] [GO:0045732 "positive regulation of protein catabolic
process" evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 CGD:CAL0005689 GO:GO:0005524 GO:GO:0005737
GO:GO:0030163 GO:GO:0017111 EMBL:AACQ01000078 EMBL:AACQ01000077
eggNOG:COG1222 TIGRFAMs:TIGR01242 HOGENOM:HOG000225143 KO:K03061
RefSeq:XP_715876.1 RefSeq:XP_715926.1 ProteinModelPortal:Q5A2A0
STRING:Q5A2A0 GeneID:3642412 GeneID:3642461 KEGG:cal:CaO19.441
KEGG:cal:CaO19.8071 Uniprot:Q5A2A0
Length = 444
Score = 357 (130.7 bits), Expect = 5.7e-36, Sum P(2) = 5.7e-36
Identities = 75/165 (45%), Positives = 104/165 (63%)
Query: 15 FIRVVGSEFVQKYLGEGPRMVRDVFRLAKENSPXXXXXXXXXXXXTKRFDAQTGADREVQ 74
FIRV+GSE VQKY+GEG RMVR++F +A+ RFD G D EVQ
Sbjct: 248 FIRVIGSELVQKYVGEGARMVRELFEMARTKKACIIFFDEVDAIGGARFDDGAGGDNEVQ 307
Query: 75 RILLELLNQMDGFDQTTNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLVFS 134
R +LEL+ Q+DGFD N+KV+ ATNR +TLDPALLRPGR+DRK+EF LPD + +F
Sbjct: 308 RTMLELITQLDGFDPRGNIKVMFATNRPNTLDPALLRPGRIDRKVEFSLPDLEGRANIFR 367
Query: 135 TITAKMNLSDEVDLEDYVAR--PDRISGADINAICQEVIMATNRA 177
+ M++ ++ E ++R P+ +GA++ ++C E M RA
Sbjct: 368 IHSKTMSVEKDIRWE-LISRLCPNA-TGAELRSVCTEAGMFAIRA 410
Score = 224 (83.9 bits), Expect = 1.0e-16, Sum P(2) = 1.0e-16
Identities = 51/127 (40%), Positives = 76/127 (59%)
Query: 200 DRRQKRLVFSTITAKMNFMLNIGNLQVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQ 259
D +R + IT F GN++V+ ATNR +TLDPALLRPGR+DRK+EF LPD
Sbjct: 303 DNEVQRTMLELITQLDGFDPR-GNIKVMFATNRPNTLDPALLRPGRIDRKVEFSLPDLEG 361
Query: 260 KRLVFSTITAKMNLSDEVDLEDYVAR--PDRISGADINAICQEAGMHAVRENRYIVLPKD 317
+ +F + M++ ++ E ++R P+ +GA++ ++C EAGM A+R R + KD
Sbjct: 362 RANIFRIHSKTMSVEKDIRWE-LISRLCPNA-TGAELRSVCTEAGMFAIRARRKVANEKD 419
Query: 318 FEKGYKK 324
F K K
Sbjct: 420 FLKAVDK 426
Score = 134 (52.2 bits), Expect = 5.3e-07, Sum P(3) = 5.3e-07
Identities = 25/40 (62%), Positives = 32/40 (80%)
Query: 169 EVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLVF 208
+V+ ATNR +TLDPALLRPGR+DRK+EF LPD + +F
Sbjct: 327 KVMFATNRPNTLDPALLRPGRIDRKVEFSLPDLEGRANIF 366
Score = 47 (21.6 bits), Expect = 5.7e-36, Sum P(2) = 5.7e-36
Identities = 13/31 (41%), Positives = 16/31 (51%)
Query: 326 AGMHAVRENRYIVLPKDF----EKGYKNNTK 352
AGM A+R R + KDF +K K N K
Sbjct: 403 AGMFAIRARRKVANEKDFLKAVDKVIKGNLK 433
Score = 39 (18.8 bits), Expect = 1.0e-16, Sum P(2) = 1.0e-16
Identities = 15/60 (25%), Positives = 26/60 (43%)
Query: 92 NVKVI--MATNRADTLDPALLRPGR---LDR---KIEFPLPDRRQKRLVFSTITAKMNLS 143
N+K I + L P + G +DR +I+ PLP R + T+ K +++
Sbjct: 125 NIKQIAKFVVGLGERLSPTDIEEGMRVGVDRHKYEIQLPLPPRIDPSVTMMTVEEKPDVT 184
>SGD|S000005785 [details] [associations]
symbol:RPT4 "ATPase of the 19S regulatory particle of the 26S
proteasome" species:4932 "Saccharomyces cerevisiae" [GO:0016887
"ATPase activity" evidence=ISS] [GO:0045899 "positive regulation of
RNA polymerase II transcriptional preinitiation complex assembly"
evidence=IMP] [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
[GO:0030163 "protein catabolic process" evidence=IEA] [GO:0005634
"nucleus" evidence=IDA] [GO:0008540 "proteasome regulatory
particle, base subcomplex" evidence=IDA] [GO:0000502 "proteasome
complex" evidence=IEA] [GO:0070682 "proteasome regulatory particle
assembly" evidence=IMP] [GO:0030433 "ER-associated protein
catabolic process" evidence=IMP] [GO:0032968 "positive regulation
of transcription elongation from RNA polymerase II promoter"
evidence=IMP] [GO:0006289 "nucleotide-excision repair"
evidence=IGI] [GO:0019904 "protein domain specific binding"
evidence=IDA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 SGD:S000005785 GO:GO:0005524 GO:GO:0005634
GO:GO:0005737 GO:GO:0019904 EMBL:BK006948 GO:GO:0016887
GO:GO:0030433 GO:GO:0045899 GO:GO:0006289 GO:GO:0032968
RefSeq:NP_014902.3 GeneID:854433 KEGG:sce:YOR259C KO:K03064
GO:GO:0070682 eggNOG:COG1222 TIGRFAMs:TIGR01242
HOGENOM:HOG000225143 GeneTree:ENSGT00550000074826 OMA:EHKEVES
GO:GO:0008540 OrthoDB:EOG40KC79 EMBL:U43720 EMBL:U93262 EMBL:Z75167
PIR:S67156 RefSeq:NP_014904.3 PDB:4B4T PDBsum:4B4T
ProteinModelPortal:P53549 SMR:P53549 DIP:DIP-1589N IntAct:P53549
MINT:MINT-397407 STRING:P53549 PaxDb:P53549 PeptideAtlas:P53549
EnsemblFungi:YOR259C GeneID:854435 KEGG:sce:YOR261C KO:K03038
NextBio:976664 Genevestigator:P53549 GermOnline:YOR259C
Uniprot:P53549
Length = 437
Score = 356 (130.4 bits), Expect = 7.2e-36, Sum P(2) = 7.2e-36
Identities = 77/168 (45%), Positives = 96/168 (57%)
Query: 2 LLCTSFDTELVTAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENSPXXXXXXXXXXXXTK 61
LL + + FI S V KY+GE R++R++F AKE+ P +
Sbjct: 230 LLAKAVAATIGANFIFSPASGIVDKYIGESARIIREMFAYAKEHEPCIIFMDEVDAIGGR 289
Query: 62 RFDAQTGADREVQRILLELLNQMDGFDQTTNVKVIMATNRADTLDPALLRPGRLDRKIEF 121
RF T ADRE+QR L+ELL QMDGFD K+IMATNR DTLDPALLRPGRLDRK+E
Sbjct: 290 RFSEGTSADREIQRTLMELLTQMDGFDNLGQTKIIMATNRPDTLDPALLRPGRLDRKVEI 349
Query: 122 PLPDRRQKRLVFSTITAKMNLSDEVDLEDYVARPDRISGADINAICQE 169
PLP+ + +F TAK+ + E D E V D +GADI E
Sbjct: 350 PLPNEAGRLEIFKIHTAKVKKTGEFDFEAAVKMSDGFNGADIRNCATE 397
Score = 263 (97.6 bits), Expect = 2.4e-22, P = 2.4e-22
Identities = 57/127 (44%), Positives = 77/127 (60%)
Query: 200 DRRQKRLVFSTITAKMNFMLNIGNLQVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQ 259
DR +R + +T +M+ N+G ++IMATNR DTLDPALLRPGRLDRK+E PLP+
Sbjct: 298 DREIQRTLMELLT-QMDGFDNLGQTKIIMATNRPDTLDPALLRPGRLDRKVEIPLPNEAG 356
Query: 260 KRLVFSTITAKMNLSDEVDLEDYVARPDRISGADINAICQEAGMHAVRENRYIVLPKDFE 319
+ +F TAK+ + E D E V D +GADI EAG A+R++R + P D
Sbjct: 357 RLEIFKIHTAKVKKTGEFDFEAAVKMSDGFNGADIRNCATEAGFFAIRDDRDHINPDDLM 416
Query: 320 KGYKKCA 326
K +K A
Sbjct: 417 KAVRKVA 423
Score = 157 (60.3 bits), Expect = 2.8e-09, Sum P(2) = 2.8e-09
Identities = 35/74 (47%), Positives = 45/74 (60%)
Query: 169 EVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLVFSTITAKMNFMLNIGNLQVIM 228
++IMATNR DTLDPALLRPGRLDRK+E PLP+ + +F TAK+ G
Sbjct: 322 KIIMATNRPDTLDPALLRPGRLDRKVEIPLPNEAGRLEIFKIHTAKVK---KTGEFDFEA 378
Query: 229 ATNRADTLDPALLR 242
A +D + A +R
Sbjct: 379 AVKMSDGFNGADIR 392
Score = 47 (21.6 bits), Expect = 7.2e-36, Sum P(2) = 7.2e-36
Identities = 13/39 (33%), Positives = 19/39 (48%)
Query: 326 AGMHAVRENRYIVLPKDFEKGYKN--NTKKDESEHEFYK 362
AG A+R++R + P D K + KK E E+ K
Sbjct: 398 AGFFAIRDDRDHINPDDLMKAVRKVAEVKKLEGTIEYQK 436
>ZFIN|ZDB-GENE-030131-666 [details] [associations]
symbol:psmc3 "proteasome (prosome, macropain) 26S
subunit, ATPase, 3" species:7955 "Danio rerio" [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0000502 "proteasome complex"
evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 ZFIN:ZDB-GENE-030131-666 GO:GO:0005524 GO:GO:0005737
GO:GO:0030163 GO:GO:0017111 GeneTree:ENSGT00560000077230
TIGRFAMs:TIGR01242 EMBL:BX957297 IPI:IPI00817732 PRIDE:F1QJQ2
Ensembl:ENSDART00000133705 ArrayExpress:F1QJQ2 Bgee:F1QJQ2
Uniprot:F1QJQ2
Length = 427
Score = 387 (141.3 bits), Expect = 7.2e-36, P = 7.2e-36
Identities = 78/179 (43%), Positives = 107/179 (59%)
Query: 2 LLCTSFDTELVTAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENSPXXXXXXXXXXXXTK 61
LL + + F+++ G + VQ ++G+G ++VRD F LAKE +P TK
Sbjct: 223 LLARACAAQTKATFLKLAGPQLVQMFIGDGAKLVRDAFALAKEKAPSIIFIDELDAIGTK 282
Query: 62 RFDAQTGADREVQRILLELLNQMDGFDQTTNVKVIMATNRADTLDPALLRPGRLDRKIEF 121
RFD++ DREVQR +LELLNQ+DGF VKVI ATNR D LDPALLR GRLDRKIEF
Sbjct: 283 RFDSEKAGDREVQRTMLELLNQLDGFQPNMQVKVIAATNRVDILDPALLRSGRLDRKIEF 342
Query: 122 PLPDRRQKRLVFSTITAKMNLSDEVDLEDYVARPDRISGADINAICQEV-IMATNRADT 179
P+P+ + + + KMN+ +V+ E+ D +GA A+C E ++A R T
Sbjct: 343 PMPNEEARARIMQIHSRKMNVCPDVNFEELARCTDDFNGAQCKAVCVEAGMIALRRGAT 401
Score = 221 (82.9 bits), Expect = 5.4e-16, P = 5.4e-16
Identities = 48/122 (39%), Positives = 70/122 (57%)
Query: 200 DRRQKRLVFSTITAKMNFMLNIGNLQVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQ 259
DR +R + + F N+ ++VI ATNR D LDPALLR GRLDRKIEFP+P+
Sbjct: 291 DREVQRTMLELLNQLDGFQPNM-QVKVIAATNRVDILDPALLRSGRLDRKIEFPMPNEEA 349
Query: 260 KRLVFSTITAKMNLSDEVDLEDYVARPDRISGADINAICQEAGMHAVRENRYIVLPKDFE 319
+ + + KMN+ +V+ E+ D +GA A+C EAGM A+R + +D+
Sbjct: 350 RARIMQIHSRKMNVCPDVNFEELARCTDDFNGAQCKAVCVEAGMIALRRGATELNHEDYM 409
Query: 320 KG 321
+G
Sbjct: 410 EG 411
Score = 142 (55.0 bits), Expect = 7.3e-07, P = 7.3e-07
Identities = 28/48 (58%), Positives = 34/48 (70%)
Query: 169 EVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLVFSTITAKMN 216
+VI ATNR D LDPALLR GRLDRKIEFP+P+ + + + KMN
Sbjct: 315 KVIAATNRVDILDPALLRSGRLDRKIEFPMPNEEARARIMQIHSRKMN 362
>POMBASE|SPCC1682.16 [details] [associations]
symbol:rpt4 "19S proteasome regulatory subunit Rpt4
(predicted)" species:4896 "Schizosaccharomyces pombe" [GO:0004175
"endopeptidase activity" evidence=ISO] [GO:0005524 "ATP binding"
evidence=ISO] [GO:0005634 "nucleus" evidence=IDA] [GO:0005829
"cytosol" evidence=IDA] [GO:0006511 "ubiquitin-dependent protein
catabolic process" evidence=ISO] [GO:0007346 "regulation of mitotic
cell cycle" evidence=IC] [GO:0008540 "proteasome regulatory
particle, base subcomplex" evidence=ISO] [GO:0016887 "ATPase
activity" evidence=ISM] [GO:0043161 "proteasomal
ubiquitin-dependent protein catabolic process" evidence=NAS]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
PomBase:SPCC1682.16 GO:GO:0005829 GO:GO:0005524 GO:GO:0005634
GO:GO:0007346 GO:GO:0043161 EMBL:CU329672 GenomeReviews:CU329672_GR
GO:GO:0016887 GO:GO:0004175 KO:K03064 eggNOG:COG1222
TIGRFAMs:TIGR01242 HOGENOM:HOG000225143 GO:GO:0008540 PIR:T41073
PIR:T41279 RefSeq:NP_587809.2 ProteinModelPortal:O74445
STRING:O74445 PRIDE:O74445 EnsemblFungi:SPCC1682.16.1
GeneID:2539189 KEGG:spo:SPCC1682.16 OMA:DKERFIV OrthoDB:EOG40KC79
NextBio:20800360 Uniprot:O74445
Length = 388
Score = 365 (133.5 bits), Expect = 9.2e-36, Sum P(2) = 9.2e-36
Identities = 77/168 (45%), Positives = 99/168 (58%)
Query: 2 LLCTSFDTELVTAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENSPXXXXXXXXXXXXTK 61
LL + L F++VV S V KY+GE R++R++F AKE+ P +
Sbjct: 181 LLARAVAASLGVNFLKVVSSAIVDKYIGESARIIREMFGYAKEHEPCVIFMDEIDAIGGR 240
Query: 62 RFDAQTGADREVQRILLELLNQMDGFDQTTNVKVIMATNRADTLDPALLRPGRLDRKIEF 121
RF T ADRE+QR L+ELLNQMDGFD K+IMATNR DTLDPALLRPGRLDRKIE
Sbjct: 241 RFSEGTSADREIQRTLMELLNQMDGFDYLGQTKIIMATNRPDTLDPALLRPGRLDRKIEI 300
Query: 122 PLPDRRQKRLVFSTITAKMNLSDEVDLEDYVARPDRISGADINAICQE 169
PLP+ + + K++ E+D E V D +GAD+ + E
Sbjct: 301 PLPNEVGRMEILKIHLEKVSKQGEIDYEALVKLTDGTNGADLRNVVTE 348
Score = 230 (86.0 bits), Expect = 2.7e-17, P = 2.7e-17
Identities = 51/129 (39%), Positives = 74/129 (57%)
Query: 200 DRRQKRLVFSTITAKMNFMLNIGNLQVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQ 259
DR +R + + +M+ +G ++IMATNR DTLDPALLRPGRLDRKIE PLP+
Sbjct: 249 DREIQRTLMELLN-QMDGFDYLGQTKIIMATNRPDTLDPALLRPGRLDRKIEIPLPNEVG 307
Query: 260 KRLVFSTITAKMNLSDEVDLEDYVARPDRISGADINAICQEAGMHAVRENRYIVLPKDFE 319
+ + K++ E+D E V D +GAD+ + EAG A++E+R V+ D
Sbjct: 308 RMEILKIHLEKVSKQGEIDYEALVKLTDGTNGADLRNVVTEAGFIAIKEDRDYVIQSDLM 367
Query: 320 KGYKKCAGM 328
+K A +
Sbjct: 368 SAARKVADL 376
Score = 143 (55.4 bits), Expect = 7.9e-07, Sum P(2) = 7.9e-07
Identities = 27/32 (84%), Positives = 30/32 (93%)
Query: 169 EVIMATNRADTLDPALLRPGRLDRKIEFPLPD 200
++IMATNR DTLDPALLRPGRLDRKIE PLP+
Sbjct: 273 KIIMATNRPDTLDPALLRPGRLDRKIEIPLPN 304
Score = 37 (18.1 bits), Expect = 9.2e-36, Sum P(2) = 9.2e-36
Identities = 11/39 (28%), Positives = 19/39 (48%)
Query: 326 AGMHAVRENRYIVLPKDFEKGYKN--NTKKDESEHEFYK 362
AG A++E+R V+ D + + KK E ++ K
Sbjct: 349 AGFIAIKEDRDYVIQSDLMSAARKVADLKKLEGTIDYQK 387
>SGD|S000001628 [details] [associations]
symbol:RPT1 "ATPase of the 19S regulatory particle of the 26S
proteasome" species:4932 "Saccharomyces cerevisiae" [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0070682 "proteasome
regulatory particle assembly" evidence=IMP] [GO:0008540 "proteasome
regulatory particle, base subcomplex" evidence=IDA] [GO:0045732
"positive regulation of protein catabolic process" evidence=IDA]
[GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=IPI] [GO:0016887 "ATPase activity" evidence=ISS]
[GO:0045899 "positive regulation of RNA polymerase II
transcriptional preinitiation complex assembly" evidence=IMP]
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0000502
"proteasome complex" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0016787 "hydrolase activity"
evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 SGD:S000001628 GO:GO:0005524 GO:GO:0005634
GO:GO:0005737 EMBL:BK006944 GO:GO:0006511 GO:GO:0017111
GO:GO:0045899 GO:GO:0045732 PDB:3VLF PDB:4A3V PDBsum:3VLF
PDBsum:4A3V GO:GO:0070682 eggNOG:COG1222 TIGRFAMs:TIGR01242
HOGENOM:HOG000225143 GO:GO:0008540 PDB:4B4T PDBsum:4B4T KO:K03061
OMA:DIRWELI GeneTree:ENSGT00550000074978 OrthoDB:EOG4B01XN
EMBL:Z22817 EMBL:X73571 EMBL:Z28145 PIR:S34354 RefSeq:NP_012777.1
ProteinModelPortal:P33299 SMR:P33299 DIP:DIP-2883N IntAct:P33299
MINT:MINT-612502 STRING:P33299 SWISS-2DPAGE:P33299 PaxDb:P33299
PeptideAtlas:P33299 PRIDE:P33299 EnsemblFungi:YKL145W GeneID:853712
KEGG:sce:YKL145W CYGD:YKL145w NextBio:974719 Genevestigator:P33299
GermOnline:YKL145W Uniprot:P33299
Length = 467
Score = 353 (129.3 bits), Expect = 1.2e-35, Sum P(2) = 1.2e-35
Identities = 75/165 (45%), Positives = 103/165 (62%)
Query: 15 FIRVVGSEFVQKYLGEGPRMVRDVFRLAKENSPXXXXXXXXXXXXTKRFDAQTGADREVQ 74
FIRV+GSE VQKY+GEG RMVR++F +A+ RFD G D EVQ
Sbjct: 271 FIRVIGSELVQKYVGEGARMVRELFEMARTKKACIIFFDEIDAVGGARFDDGAGGDNEVQ 330
Query: 75 RILLELLNQMDGFDQTTNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLVFS 134
R +LEL+ Q+DGFD N+KV+ ATNR +TLDPALLRPGR+DRK+EF LPD + +F
Sbjct: 331 RTMLELITQLDGFDPRGNIKVMFATNRPNTLDPALLRPGRIDRKVEFSLPDLEGRANIFR 390
Query: 135 TITAKMNLSDEVDLEDYVAR--PDRISGADINAICQEVIMATNRA 177
+ M++ + E ++R P+ +GA++ ++C E M RA
Sbjct: 391 IHSKSMSVERGIRWE-LISRLCPNS-TGAELRSVCTEAGMFAIRA 433
Score = 222 (83.2 bits), Expect = 2.0e-16, Sum P(2) = 2.0e-16
Identities = 51/127 (40%), Positives = 75/127 (59%)
Query: 200 DRRQKRLVFSTITAKMNFMLNIGNLQVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQ 259
D +R + IT F GN++V+ ATNR +TLDPALLRPGR+DRK+EF LPD
Sbjct: 326 DNEVQRTMLELITQLDGFDPR-GNIKVMFATNRPNTLDPALLRPGRIDRKVEFSLPDLEG 384
Query: 260 KRLVFSTITAKMNLSDEVDLEDYVAR--PDRISGADINAICQEAGMHAVRENRYIVLPKD 317
+ +F + M++ + E ++R P+ +GA++ ++C EAGM A+R R + KD
Sbjct: 385 RANIFRIHSKSMSVERGIRWE-LISRLCPNS-TGAELRSVCTEAGMFAIRARRKVATEKD 442
Query: 318 FEKGYKK 324
F K K
Sbjct: 443 FLKAVDK 449
Score = 135 (52.6 bits), Expect = 3.3e-07, Sum P(3) = 3.3e-07
Identities = 26/48 (54%), Positives = 35/48 (72%)
Query: 169 EVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLVFSTITAKMN 216
+V+ ATNR +TLDPALLRPGR+DRK+EF LPD + +F + M+
Sbjct: 350 KVMFATNRPNTLDPALLRPGRIDRKVEFSLPDLEGRANIFRIHSKSMS 397
Score = 48 (22.0 bits), Expect = 1.2e-35, Sum P(2) = 1.2e-35
Identities = 10/20 (50%), Positives = 12/20 (60%)
Query: 326 AGMHAVRENRYIVLPKDFEK 345
AGM A+R R + KDF K
Sbjct: 426 AGMFAIRARRKVATEKDFLK 445
Score = 40 (19.1 bits), Expect = 2.0e-16, Sum P(2) = 2.0e-16
Identities = 15/50 (30%), Positives = 24/50 (48%)
Query: 110 LRPGRLDRK---IEFPLPDRRQKRLVFSTITAKMNL--SDEVDLEDYVAR 154
+R G +DR IE PLP R + T+ K ++ SD +D + +
Sbjct: 172 MRVG-VDRSKYNIELPLPPRIDPSVTMMTVEEKPDVTYSDVGGCKDQIEK 220
>POMBASE|SPAC3A11.12c [details] [associations]
symbol:rpt5 "19S proteasome regulatory subunit Rpt5
(predicted)" species:4896 "Schizosaccharomyces pombe" [GO:0004175
"endopeptidase activity" evidence=ISO] [GO:0005524 "ATP binding"
evidence=ISM] [GO:0005634 "nucleus" evidence=IEA] [GO:0005829
"cytosol" evidence=IDA] [GO:0006511 "ubiquitin-dependent protein
catabolic process" evidence=ISO] [GO:0007346 "regulation of mitotic
cell cycle" evidence=IC] [GO:0008540 "proteasome regulatory
particle, base subcomplex" evidence=ISO] [GO:0016887 "ATPase
activity" evidence=ISO] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 PomBase:SPAC3A11.12c GO:GO:0005829 GO:GO:0005524
GO:GO:0005634 GO:GO:0007346 EMBL:CU329670 GenomeReviews:CU329670_GR
GO:GO:0016887 GO:GO:0004175 GO:GO:0006511 eggNOG:COG1222
TIGRFAMs:TIGR01242 KO:K03065 HOGENOM:HOG000225143 GO:GO:0008540
OMA:GALMYGP EMBL:AB012136 PIR:T11634 RefSeq:XP_001713083.1
ProteinModelPortal:O14126 STRING:O14126 PRIDE:O14126
EnsemblFungi:SPAC3A11.12c.1 GeneID:3361462 KEGG:spo:SPAC3A11.12c
OrthoDB:EOG40VZZ2 NextBio:20811506 Uniprot:O14126
Length = 438
Score = 385 (140.6 bits), Expect = 1.2e-35, P = 1.2e-35
Identities = 77/179 (43%), Positives = 109/179 (60%)
Query: 2 LLCTSFDTELVTAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENSPXXXXXXXXXXXXTK 61
LL + + F+++ + VQ ++G+G ++VRD F LAKE SP TK
Sbjct: 234 LLARACAAQSNATFLKLAAPQLVQMFIGDGAKLVRDAFALAKEKSPAIIFIDELDAIGTK 293
Query: 62 RFDAQTGADREVQRILLELLNQMDGFDQTTNVKVIMATNRADTLDPALLRPGRLDRKIEF 121
RFD++ DREVQR +LELLNQ+DGF VKVI ATNR DTLDPALLR GRLDRK+EF
Sbjct: 294 RFDSEKAGDREVQRTMLELLNQLDGFSSDDRVKVIAATNRVDTLDPALLRSGRLDRKLEF 353
Query: 122 PLPDRRQKRLVFSTITAKMNLSDEVDLEDYVARPDRISGADINAICQEV-IMATNRADT 179
PLP+ + + + KM + D+++ E+ D +GA + ++C E ++A + DT
Sbjct: 354 PLPNEEARVGILRIHSRKMAIDDDINWEELARSTDEYNGAMLKSVCVEAGMIALRQGDT 412
Score = 210 (79.0 bits), Expect = 1.2e-14, P = 1.2e-14
Identities = 44/109 (40%), Positives = 66/109 (60%)
Query: 200 DRRQKRLVFSTITAKMNFMLNIGNLQVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQ 259
DR +R + + F + ++VI ATNR DTLDPALLR GRLDRK+EFPLP+
Sbjct: 302 DREVQRTMLELLNQLDGFSSD-DRVKVIAATNRVDTLDPALLRSGRLDRKLEFPLPNEEA 360
Query: 260 KRLVFSTITAKMNLSDEVDLEDYVARPDRISGADINAICQEAGMHAVRE 308
+ + + KM + D+++ E+ D +GA + ++C EAGM A+R+
Sbjct: 361 RVGILRIHSRKMAIDDDINWEELARSTDEYNGAMLKSVCVEAGMIALRQ 409
Score = 137 (53.3 bits), Expect = 2.8e-06, P = 2.8e-06
Identities = 28/47 (59%), Positives = 34/47 (72%)
Query: 169 EVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLVFSTITAKM 215
+VI ATNR DTLDPALLR GRLDRK+EFPLP+ + + + KM
Sbjct: 326 KVIAATNRVDTLDPALLRSGRLDRKLEFPLPNEEARVGILRIHSRKM 372
>GENEDB_PFALCIPARUM|PF13_0063 [details] [associations]
symbol:PF13_0063 "26S proteasome regulatory
subunit 7, putative" species:5833 "Plasmodium falciparum"
[GO:0005838 "proteasome regulatory particle" evidence=ISS]
[GO:0004175 "endopeptidase activity" evidence=ISS] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=ISS]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0005737 GO:GO:0004175 GO:GO:0006511
GO:GO:0017111 EMBL:AL844509 TIGRFAMs:TIGR01242 HOGENOM:HOG000225143
GO:GO:0005838 KO:K03061 OMA:DIRWELI ProtClustDB:CLSZ2429177
RefSeq:XP_001349843.2 ProteinModelPortal:Q8IEK3 IntAct:Q8IEK3
MINT:MINT-1698409 PRIDE:Q8IEK3 EnsemblProtists:PF13_0063:mRNA
GeneID:814041 KEGG:pfa:PF13_0063 EuPathDB:PlasmoDB:PF3D7_1311500
Uniprot:Q8IEK3
Length = 420
Score = 358 (131.1 bits), Expect = 3.1e-35, Sum P(2) = 3.1e-35
Identities = 78/165 (47%), Positives = 103/165 (62%)
Query: 15 FIRVVGSEFVQKYLGEGPRMVRDVFRLAKENSPXXXXXXXXXXXXTKRFDAQTGADREVQ 74
FI V+GSE VQKY+GEG RMVR++F++AK R D D EVQ
Sbjct: 224 FICVIGSELVQKYVGEGARMVRELFQMAKSKKACILFIDEVDAIGGSRGDESAHGDHEVQ 283
Query: 75 RILLELLNQMDGFDQTTNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLVFS 134
R +LE++NQ+DGFD N+KV+MATNR DTLD AL+RPGR+DR+IEF LPD + +F
Sbjct: 284 RTMLEIVNQLDGFDNRGNIKVLMATNRPDTLDSALVRPGRIDRRIEFSLPDLEGRTHIFK 343
Query: 135 TITAKMNLSDEVDLEDYVAR--PDRISGADINAICQEVIMATNRA 177
MN+S +V E +AR P+ +G+DI ++C E M RA
Sbjct: 344 IHANTMNMSRDVRFE-LLARLCPNS-TGSDIRSVCTEAGMFAIRA 386
Score = 227 (85.0 bits), Expect = 9.2e-17, P = 9.2e-17
Identities = 49/100 (49%), Positives = 67/100 (67%)
Query: 220 NIGNLQVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLVFSTITAKMNLSDEVDL 279
N GN++V+MATNR DTLD AL+RPGR+DR+IEF LPD + +F MN+S +V
Sbjct: 298 NRGNIKVLMATNRPDTLDSALVRPGRIDRRIEFSLPDLEGRTHIFKIHANTMNMSRDVRF 357
Query: 280 EDYVAR--PDRISGADINAICQEAGMHAVRENRYIVLPKD 317
E +AR P+ +G+DI ++C EAGM A+R R + KD
Sbjct: 358 E-LLARLCPNS-TGSDIRSVCTEAGMFAIRARRKTITEKD 395
Score = 137 (53.3 bits), Expect = 3.2e-06, Sum P(2) = 3.2e-06
Identities = 27/53 (50%), Positives = 36/53 (67%)
Query: 169 EVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLVFSTITAKMNFMLNI 221
+V+MATNR DTLD AL+RPGR+DR+IEF LPD + +F MN ++
Sbjct: 303 KVLMATNRPDTLDSALVRPGRIDRRIEFSLPDLEGRTHIFKIHANTMNMSRDV 355
Score = 39 (18.8 bits), Expect = 3.1e-35, Sum P(2) = 3.1e-35
Identities = 8/17 (47%), Positives = 10/17 (58%)
Query: 326 AGMHAVRENRYIVLPKD 342
AGM A+R R + KD
Sbjct: 379 AGMFAIRARRKTITEKD 395
>UNIPROTKB|Q8IEK3 [details] [associations]
symbol:PF13_0063 "26S proteasome regulatory subunit 7,
putative" species:36329 "Plasmodium falciparum 3D7" [GO:0004175
"endopeptidase activity" evidence=ISS] [GO:0005838 "proteasome
regulatory particle" evidence=ISS] [GO:0006511 "ubiquitin-dependent
protein catabolic process" evidence=ISS] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GO:GO:0005737 GO:GO:0004175 GO:GO:0006511 GO:GO:0017111
EMBL:AL844509 TIGRFAMs:TIGR01242 HOGENOM:HOG000225143 GO:GO:0005838
KO:K03061 OMA:DIRWELI ProtClustDB:CLSZ2429177 RefSeq:XP_001349843.2
ProteinModelPortal:Q8IEK3 IntAct:Q8IEK3 MINT:MINT-1698409
PRIDE:Q8IEK3 EnsemblProtists:PF13_0063:mRNA GeneID:814041
KEGG:pfa:PF13_0063 EuPathDB:PlasmoDB:PF3D7_1311500 Uniprot:Q8IEK3
Length = 420
Score = 358 (131.1 bits), Expect = 3.1e-35, Sum P(2) = 3.1e-35
Identities = 78/165 (47%), Positives = 103/165 (62%)
Query: 15 FIRVVGSEFVQKYLGEGPRMVRDVFRLAKENSPXXXXXXXXXXXXTKRFDAQTGADREVQ 74
FI V+GSE VQKY+GEG RMVR++F++AK R D D EVQ
Sbjct: 224 FICVIGSELVQKYVGEGARMVRELFQMAKSKKACILFIDEVDAIGGSRGDESAHGDHEVQ 283
Query: 75 RILLELLNQMDGFDQTTNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLVFS 134
R +LE++NQ+DGFD N+KV+MATNR DTLD AL+RPGR+DR+IEF LPD + +F
Sbjct: 284 RTMLEIVNQLDGFDNRGNIKVLMATNRPDTLDSALVRPGRIDRRIEFSLPDLEGRTHIFK 343
Query: 135 TITAKMNLSDEVDLEDYVAR--PDRISGADINAICQEVIMATNRA 177
MN+S +V E +AR P+ +G+DI ++C E M RA
Sbjct: 344 IHANTMNMSRDVRFE-LLARLCPNS-TGSDIRSVCTEAGMFAIRA 386
Score = 227 (85.0 bits), Expect = 9.2e-17, P = 9.2e-17
Identities = 49/100 (49%), Positives = 67/100 (67%)
Query: 220 NIGNLQVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLVFSTITAKMNLSDEVDL 279
N GN++V+MATNR DTLD AL+RPGR+DR+IEF LPD + +F MN+S +V
Sbjct: 298 NRGNIKVLMATNRPDTLDSALVRPGRIDRRIEFSLPDLEGRTHIFKIHANTMNMSRDVRF 357
Query: 280 EDYVAR--PDRISGADINAICQEAGMHAVRENRYIVLPKD 317
E +AR P+ +G+DI ++C EAGM A+R R + KD
Sbjct: 358 E-LLARLCPNS-TGSDIRSVCTEAGMFAIRARRKTITEKD 395
Score = 137 (53.3 bits), Expect = 3.2e-06, Sum P(2) = 3.2e-06
Identities = 27/53 (50%), Positives = 36/53 (67%)
Query: 169 EVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLVFSTITAKMNFMLNI 221
+V+MATNR DTLD AL+RPGR+DR+IEF LPD + +F MN ++
Sbjct: 303 KVLMATNRPDTLDSALVRPGRIDRRIEFSLPDLEGRTHIFKIHANTMNMSRDV 355
Score = 39 (18.8 bits), Expect = 3.1e-35, Sum P(2) = 3.1e-35
Identities = 8/17 (47%), Positives = 10/17 (58%)
Query: 326 AGMHAVRENRYIVLPKD 342
AGM A+R R + KD
Sbjct: 379 AGMFAIRARRKTITEKD 395
>ASPGD|ASPL0000010049 [details] [associations]
symbol:AN4236 species:162425 "Emericella nidulans"
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0070682 "proteasome
regulatory particle assembly" evidence=IEA] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=IEA]
[GO:0045899 "positive regulation of RNA polymerase II
transcriptional preinitiation complex assembly" evidence=IEA]
[GO:0005829 "cytosol" evidence=IEA] [GO:0008540 "proteasome
regulatory particle, base subcomplex" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0005737 EMBL:BN001302 GO:GO:0030163
GO:GO:0017111 EMBL:AACD01000068 eggNOG:COG1222 TIGRFAMs:TIGR01242
KO:K03065 HOGENOM:HOG000225143 OMA:GALMYGP OrthoDB:EOG40VZZ2
RefSeq:XP_661840.1 ProteinModelPortal:Q5B5E4 STRING:Q5B5E4
EnsemblFungi:CADANIAT00004422 GeneID:2873654 KEGG:ani:AN4236.2
Uniprot:Q5B5E4
Length = 465
Score = 381 (139.2 bits), Expect = 3.1e-35, P = 3.1e-35
Identities = 76/175 (43%), Positives = 102/175 (58%)
Query: 2 LLCTSFDTELVTAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENSPXXXXXXXXXXXXTK 61
LL + E F+++ G + VQ ++G+G ++VRD F LAKE +P TK
Sbjct: 260 LLARACAAETNATFLKLAGPQLVQMFIGDGAKLVRDCFALAKEKAPSIIFIDELDAVGTK 319
Query: 62 RFDAQTGADREVQRILLELLNQMDGFDQTTNVKVIMATNRADTLDPALLRPGRLDRKIEF 121
RFD++ DREVQR +LELLNQ+DGF +KV+ ATNR D LDPALLR GRLDRKIEF
Sbjct: 320 RFDSEKSGDREVQRTMLELLNQLDGFASDDRIKVLAATNRVDVLDPALLRSGRLDRKIEF 379
Query: 122 PLPDRRQKRLVFSTITAKMNLSDEVDLEDYVARPDRISGADINAICQEVIMATNR 176
PLP+ + + + KM + D V+ + D GA + A+C E M R
Sbjct: 380 PLPNEEARANILQIHSRKMTVEDSVNWAELARSTDEFGGAQLKAVCVEAGMIALR 434
Score = 209 (78.6 bits), Expect = 1.9e-14, P = 1.9e-14
Identities = 44/109 (40%), Positives = 62/109 (56%)
Query: 200 DRRQKRLVFSTITAKMNFMLNIGNLQVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQ 259
DR +R + + F + ++V+ ATNR D LDPALLR GRLDRKIEFPLP+
Sbjct: 328 DREVQRTMLELLNQLDGFASD-DRIKVLAATNRVDVLDPALLRSGRLDRKIEFPLPNEEA 386
Query: 260 KRLVFSTITAKMNLSDEVDLEDYVARPDRISGADINAICQEAGMHAVRE 308
+ + + KM + D V+ + D GA + A+C EAGM A+R+
Sbjct: 387 RANILQIHSRKMTVEDSVNWAELARSTDEFGGAQLKAVCVEAGMIALRK 435
Score = 136 (52.9 bits), Expect = 4.0e-06, P = 4.0e-06
Identities = 27/47 (57%), Positives = 33/47 (70%)
Query: 169 EVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLVFSTITAKM 215
+V+ ATNR D LDPALLR GRLDRKIEFPLP+ + + + KM
Sbjct: 352 KVLAATNRVDVLDPALLRSGRLDRKIEFPLPNEEARANILQIHSRKM 398
>CGD|CAL0002261 [details] [associations]
symbol:RPT5 species:5476 "Candida albicans" [GO:0008540
"proteasome regulatory particle, base subcomplex" evidence=IEA]
[GO:0005829 "cytosol" evidence=IEA] [GO:0070682 "proteasome
regulatory particle assembly" evidence=IEA] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=IEA]
[GO:0045899 "positive regulation of RNA polymerase II
transcriptional preinitiation complex assembly" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
CGD:CAL0002261 GO:GO:0005524 GO:GO:0005737 GO:GO:0030163
GO:GO:0017111 EMBL:AACQ01000086 EMBL:AACQ01000085 eggNOG:COG1222
TIGRFAMs:TIGR01242 KO:K03065 RefSeq:XP_715432.1 RefSeq:XP_715502.1
ProteinModelPortal:Q5A0X3 STRING:Q5A0X3 GeneID:3642858
GeneID:3642911 KEGG:cal:CaO19.10635 KEGG:cal:CaO19.3123
Uniprot:Q5A0X3
Length = 454
Score = 353 (129.3 bits), Expect = 5.0e-35, Sum P(2) = 5.0e-35
Identities = 74/176 (42%), Positives = 100/176 (56%)
Query: 2 LLCTSFDTELVTAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENSPXXXXXXXXXXXXTK 61
LL + + F+++ + VQ ++G+G ++VRD F LAKE +P TK
Sbjct: 249 LLARACAAQSGATFLKLAAPQLVQMFIGDGAKLVRDAFALAKEKAPTIIFIDELDAIGTK 308
Query: 62 RFDAQTGADREVQRILLELLNQMDGFDQTTNVKVIMATNRADTLDPALLRPGRLDRKIEF 121
RFD+ DREVQR +LELLNQ+DGF VKV+ ATNR DTLDPALLR GRLDRKIEF
Sbjct: 309 RFDSDKSGDREVQRTMLELLNQLDGFGSDDRVKVLAATNRVDTLDPALLRSGRLDRKIEF 368
Query: 122 PLPDRRQKRLVFSTITAKMNL-SDEVDLEDYVARPDRISGADINAICQEVIMATNR 176
PLP + V K++ ++ V+ + D +GA + A+ E M R
Sbjct: 369 PLPSEEARESVLKIHARKLHCDNNSVNWRELARSTDEFNGAQLKAVTVEAGMIALR 424
Score = 206 (77.6 bits), Expect = 4.0e-14, P = 4.0e-14
Identities = 50/141 (35%), Positives = 75/141 (53%)
Query: 200 DRRQKRLVFSTITAKMNFMLNIGN---LQVIMATNRADTLDPALLRPGRLDRKIEFPLPD 256
D+ R V T+ +N + G+ ++V+ ATNR DTLDPALLR GRLDRKIEFPLP
Sbjct: 313 DKSGDREVQRTMLELLNQLDGFGSDDRVKVLAATNRVDTLDPALLRSGRLDRKIEFPLPS 372
Query: 257 RRQKRLVFSTITAKMNL-SDEVDLEDYVARPDRISGADINAICQEAGMHAVRENRYIVLP 315
+ V K++ ++ V+ + D +GA + A+ EAGM A+R + I+
Sbjct: 373 EEARESVLKIHARKLHCDNNSVNWRELARSTDEFNGAQLKAVTVEAGMIALRNGKSIIKH 432
Query: 316 KDFEKGYKKCAGMHAVRENRY 336
+DF + + + N Y
Sbjct: 433 EDFVEAISEVQARKSKSVNFY 453
Score = 140 (54.3 bits), Expect = 9.4e-07, Sum P(2) = 9.4e-07
Identities = 28/48 (58%), Positives = 33/48 (68%)
Query: 169 EVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLVFSTITAKMN 216
+V+ ATNR DTLDPALLR GRLDRKIEFPLP + V K++
Sbjct: 341 KVLAATNRVDTLDPALLRSGRLDRKIEFPLPSEEARESVLKIHARKLH 388
Score = 42 (19.8 bits), Expect = 5.0e-35, Sum P(2) = 5.0e-35
Identities = 10/36 (27%), Positives = 16/36 (44%)
Query: 326 AGMHAVRENRYIVLPKDFEKGYKNNTKKDESEHEFY 361
AGM A+R + I+ +DF + + FY
Sbjct: 418 AGMIALRNGKSIIKHEDFVEAISEVQARKSKSVNFY 453
>WB|WBGene00004505 [details] [associations]
symbol:rpt-5 species:6239 "Caenorhabditis elegans"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0030163 "protein
catabolic process" evidence=IEA] [GO:0006281 "DNA repair"
evidence=IEA] [GO:0006310 "DNA recombination" evidence=IEA]
[GO:0009378 "four-way junction helicase activity" evidence=IEA]
[GO:0016887 "ATPase activity" evidence=IEA] [GO:0009792 "embryo
development ending in birth or egg hatching" evidence=IMP]
[GO:0000003 "reproduction" evidence=IMP] [GO:0002119 "nematode
larval development" evidence=IMP] [GO:0008340 "determination of
adult lifespan" evidence=IMP] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0008340 GO:GO:0009792
GO:GO:0005737 GO:GO:0002119 GO:GO:0000003 GO:GO:0030163 HSSP:Q01853
GO:GO:0017111 GeneTree:ENSGT00560000077230 EMBL:FO080337
eggNOG:COG1222 TIGRFAMs:TIGR01242 KO:K03065 HOGENOM:HOG000225143
OMA:GALMYGP PIR:T33155 RefSeq:NP_491672.1 ProteinModelPortal:O76371
SMR:O76371 IntAct:O76371 MINT:MINT-211164 STRING:O76371
PaxDb:O76371 EnsemblMetazoa:F56H1.4.1 EnsemblMetazoa:F56H1.4.2
GeneID:172238 KEGG:cel:CELE_F56H1.4 UCSC:F56H1.4.2 CTD:172238
WormBase:F56H1.4 InParanoid:O76371 NextBio:874627 Uniprot:O76371
Length = 430
Score = 379 (138.5 bits), Expect = 5.1e-35, P = 5.1e-35
Identities = 77/183 (42%), Positives = 109/183 (59%)
Query: 13 TAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENSPXXXXXXXXXXXXTKRFDAQTGADRE 72
+ F+++ G + VQ ++G+G ++VRD F LAKE +P TKRFD++ DRE
Sbjct: 237 STFLKLAGPQLVQMFIGDGAKLVRDAFALAKEKAPAIIFIDELDAIGTKRFDSEKAGDRE 296
Query: 73 VQRILLELLNQMDGFDQTTNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLV 132
VQR +LELLNQ+DGF ++KVI ATNR D LDPALLR GRLDRKIE P P+ + +
Sbjct: 297 VQRTMLELLNQLDGFQPNDDIKVIAATNRIDVLDPALLRSGRLDRKIELPHPNEDARARI 356
Query: 133 FSTITAKMNLSDEVDLEDYVARPDRISGADINAICQEVIMATNRADTLDPALLRPGRLDR 192
+ KMN++ +V+ E+ D +GA A+C E M R D + +L +D
Sbjct: 357 MQIHSRKMNVNKDVNFEELARCTDDFNGAQCKAVCVEAGMIALRRDATE--ILHEDFMDA 414
Query: 193 KIE 195
+E
Sbjct: 415 ILE 417
Score = 218 (81.8 bits), Expect = 8.6e-16, Sum P(2) = 8.6e-16
Identities = 48/119 (40%), Positives = 69/119 (57%)
Query: 200 DRRQKRLVFSTITAKMNFMLNIGNLQVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQ 259
DR +R + + F N +++VI ATNR D LDPALLR GRLDRKIE P P+
Sbjct: 294 DREVQRTMLELLNQLDGFQPN-DDIKVIAATNRIDVLDPALLRSGRLDRKIELPHPNEDA 352
Query: 260 KRLVFSTITAKMNLSDEVDLEDYVARPDRISGADINAICQEAGMHAVRENRYIVLPKDF 318
+ + + KMN++ +V+ E+ D +GA A+C EAGM A+R + +L +DF
Sbjct: 353 RARIMQIHSRKMNVNKDVNFEELARCTDDFNGAQCKAVCVEAGMIALRRDATEILHEDF 411
Score = 129 (50.5 bits), Expect = 2.7e-05, Sum P(3) = 2.7e-05
Identities = 27/48 (56%), Positives = 32/48 (66%)
Query: 169 EVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLVFSTITAKMN 216
+VI ATNR D LDPALLR GRLDRKIE P P+ + + + KMN
Sbjct: 318 KVIAATNRIDVLDPALLRSGRLDRKIELPHPNEDARARIMQIHSRKMN 365
Score = 37 (18.1 bits), Expect = 8.6e-16, Sum P(2) = 8.6e-16
Identities = 7/36 (19%), Positives = 20/36 (55%)
Query: 60 TKRFDAQTGADREVQRILLELLNQMDGFDQTTNVKV 95
T+++ G D+++Q ++ ++ M D+ N+ +
Sbjct: 173 TEQYSDIGGCDKQIQELIEAVVLPMTHKDRFVNLGI 208
Score = 37 (18.1 bits), Expect = 2.7e-05, Sum P(3) = 2.7e-05
Identities = 10/36 (27%), Positives = 17/36 (47%)
Query: 326 AGMHAVRENRYIVLPKDFEKGYKNNTKKDESEHEFY 361
AGM A+R + +L +DF K ++ +Y
Sbjct: 394 AGMIALRRDATEILHEDFMDAILEVQAKKKASLNYY 429
>UNIPROTKB|O76371 [details] [associations]
symbol:rpt-5 "Protein RPT-5" species:6239 "Caenorhabditis
elegans" [GO:0005515 "protein binding" evidence=IPI]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0008340 GO:GO:0009792 GO:GO:0005737
GO:GO:0002119 GO:GO:0000003 GO:GO:0030163 HSSP:Q01853 GO:GO:0017111
GeneTree:ENSGT00560000077230 EMBL:FO080337 eggNOG:COG1222
TIGRFAMs:TIGR01242 KO:K03065 HOGENOM:HOG000225143 OMA:GALMYGP
PIR:T33155 RefSeq:NP_491672.1 ProteinModelPortal:O76371 SMR:O76371
IntAct:O76371 MINT:MINT-211164 STRING:O76371 PaxDb:O76371
EnsemblMetazoa:F56H1.4.1 EnsemblMetazoa:F56H1.4.2 GeneID:172238
KEGG:cel:CELE_F56H1.4 UCSC:F56H1.4.2 CTD:172238 WormBase:F56H1.4
InParanoid:O76371 NextBio:874627 Uniprot:O76371
Length = 430
Score = 379 (138.5 bits), Expect = 5.1e-35, P = 5.1e-35
Identities = 77/183 (42%), Positives = 109/183 (59%)
Query: 13 TAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENSPXXXXXXXXXXXXTKRFDAQTGADRE 72
+ F+++ G + VQ ++G+G ++VRD F LAKE +P TKRFD++ DRE
Sbjct: 237 STFLKLAGPQLVQMFIGDGAKLVRDAFALAKEKAPAIIFIDELDAIGTKRFDSEKAGDRE 296
Query: 73 VQRILLELLNQMDGFDQTTNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLV 132
VQR +LELLNQ+DGF ++KVI ATNR D LDPALLR GRLDRKIE P P+ + +
Sbjct: 297 VQRTMLELLNQLDGFQPNDDIKVIAATNRIDVLDPALLRSGRLDRKIELPHPNEDARARI 356
Query: 133 FSTITAKMNLSDEVDLEDYVARPDRISGADINAICQEVIMATNRADTLDPALLRPGRLDR 192
+ KMN++ +V+ E+ D +GA A+C E M R D + +L +D
Sbjct: 357 MQIHSRKMNVNKDVNFEELARCTDDFNGAQCKAVCVEAGMIALRRDATE--ILHEDFMDA 414
Query: 193 KIE 195
+E
Sbjct: 415 ILE 417
Score = 218 (81.8 bits), Expect = 8.6e-16, Sum P(2) = 8.6e-16
Identities = 48/119 (40%), Positives = 69/119 (57%)
Query: 200 DRRQKRLVFSTITAKMNFMLNIGNLQVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQ 259
DR +R + + F N +++VI ATNR D LDPALLR GRLDRKIE P P+
Sbjct: 294 DREVQRTMLELLNQLDGFQPN-DDIKVIAATNRIDVLDPALLRSGRLDRKIELPHPNEDA 352
Query: 260 KRLVFSTITAKMNLSDEVDLEDYVARPDRISGADINAICQEAGMHAVRENRYIVLPKDF 318
+ + + KMN++ +V+ E+ D +GA A+C EAGM A+R + +L +DF
Sbjct: 353 RARIMQIHSRKMNVNKDVNFEELARCTDDFNGAQCKAVCVEAGMIALRRDATEILHEDF 411
Score = 129 (50.5 bits), Expect = 2.7e-05, Sum P(3) = 2.7e-05
Identities = 27/48 (56%), Positives = 32/48 (66%)
Query: 169 EVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLVFSTITAKMN 216
+VI ATNR D LDPALLR GRLDRKIE P P+ + + + KMN
Sbjct: 318 KVIAATNRIDVLDPALLRSGRLDRKIELPHPNEDARARIMQIHSRKMN 365
Score = 37 (18.1 bits), Expect = 8.6e-16, Sum P(2) = 8.6e-16
Identities = 7/36 (19%), Positives = 20/36 (55%)
Query: 60 TKRFDAQTGADREVQRILLELLNQMDGFDQTTNVKV 95
T+++ G D+++Q ++ ++ M D+ N+ +
Sbjct: 173 TEQYSDIGGCDKQIQELIEAVVLPMTHKDRFVNLGI 208
Score = 37 (18.1 bits), Expect = 2.7e-05, Sum P(3) = 2.7e-05
Identities = 10/36 (27%), Positives = 17/36 (47%)
Query: 326 AGMHAVRENRYIVLPKDFEKGYKNNTKKDESEHEFY 361
AGM A+R + +L +DF K ++ +Y
Sbjct: 394 AGMIALRRDATEILHEDFMDAILEVQAKKKASLNYY 429
>CGD|CAL0005827 [details] [associations]
symbol:RPT4 species:5476 "Candida albicans" [GO:0005634
"nucleus" evidence=IEA] [GO:0005829 "cytosol" evidence=IEA]
[GO:0008540 "proteasome regulatory particle, base subcomplex"
evidence=IEA] [GO:0019904 "protein domain specific binding"
evidence=IEA] [GO:0070682 "proteasome regulatory particle assembly"
evidence=IEA] [GO:0032968 "positive regulation of transcription
elongation from RNA polymerase II promoter" evidence=IEA]
[GO:0045899 "positive regulation of RNA polymerase II
transcriptional preinitiation complex assembly" evidence=IEA]
[GO:0030433 "ER-associated protein catabolic process" evidence=IEA]
[GO:0006289 "nucleotide-excision repair" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
CGD:CAL0005827 GO:GO:0005524 GO:GO:0005737 GO:GO:0030163
GO:GO:0017111 EMBL:AACQ01000055 EMBL:AACQ01000054 KO:K03064
eggNOG:COG1222 TIGRFAMs:TIGR01242 RefSeq:XP_717345.1
RefSeq:XP_717434.1 ProteinModelPortal:Q5A6S2 STRING:Q5A6S2
GeneID:3640859 GeneID:3640966 KEGG:cal:CaO19.482
KEGG:cal:CaO19.8112 Uniprot:Q5A6S2
Length = 428
Score = 344 (126.2 bits), Expect = 1.0e-34, Sum P(2) = 1.0e-34
Identities = 76/168 (45%), Positives = 95/168 (56%)
Query: 2 LLCTSFDTELVTAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENSPXXXXXXXXXXXXTK 61
LL + + FI S V KY+GE R++R++F AKE+ P +
Sbjct: 221 LLAKAVAATIGANFIFSPASAIVDKYIGESARLIREMFAYAKEHEPCIIFMDEVDAIGGR 280
Query: 62 RFDAQTGADREVQRILLELLNQMDGFDQTTNVKVIMATNRADTLDPALLRPGRLDRKIEF 121
RF T ADRE+QR L+ELLNQMDGFD K+IMATNR DTLDPALLR GRLDRKIE
Sbjct: 281 RFSEGTSADREIQRTLMELLNQMDGFDTLGQTKIIMATNRPDTLDPALLRAGRLDRKIEI 340
Query: 122 PLPDRRQKRLVFSTITAKMNLSDEVDLEDYVARPDRISGADINAICQE 169
LP+ + +F T+K+ E D E V D +GADI + E
Sbjct: 341 GLPNEAGRLEIFKIHTSKVAKQGEFDFEAAVKMSDGFNGADIRNVVTE 388
Score = 235 (87.8 bits), Expect = 9.4e-18, P = 9.4e-18
Identities = 53/127 (41%), Positives = 73/127 (57%)
Query: 200 DRRQKRLVFSTITAKMNFMLNIGNLQVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQ 259
DR +R + + +M+ +G ++IMATNR DTLDPALLR GRLDRKIE LP+
Sbjct: 289 DREIQRTLMELLN-QMDGFDTLGQTKIIMATNRPDTLDPALLRAGRLDRKIEIGLPNEAG 347
Query: 260 KRLVFSTITAKMNLSDEVDLEDYVARPDRISGADINAICQEAGMHAVRENRYIVLPKDFE 319
+ +F T+K+ E D E V D +GADI + EAG A+R++R +L D
Sbjct: 348 RLEIFKIHTSKVAKQGEFDFEAAVKMSDGFNGADIRNVVTEAGFFAIRDDRDYILQNDLM 407
Query: 320 KGYKKCA 326
K +K A
Sbjct: 408 KAVRKVA 414
Score = 137 (53.3 bits), Expect = 4.1e-07, Sum P(2) = 4.1e-07
Identities = 28/47 (59%), Positives = 35/47 (74%)
Query: 169 EVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLVFSTITAKM 215
++IMATNR DTLDPALLR GRLDRKIE LP+ + +F T+K+
Sbjct: 313 KIIMATNRPDTLDPALLRAGRLDRKIEIGLPNEAGRLEIFKIHTSKV 359
Score = 48 (22.0 bits), Expect = 1.0e-34, Sum P(2) = 1.0e-34
Identities = 12/39 (30%), Positives = 21/39 (53%)
Query: 326 AGMHAVRENRYIVLPKDFEKGYKN--NTKKDESEHEFYK 362
AG A+R++R +L D K + + KK E + ++ K
Sbjct: 389 AGFFAIRDDRDYILQNDLMKAVRKVADVKKLEGKLDYEK 427
>POMBASE|SPBC16C6.07c [details] [associations]
symbol:rpt1 "19S proteasome regulatory subunit Rpt1
(predicted)" species:4896 "Schizosaccharomyces pombe" [GO:0004175
"endopeptidase activity" evidence=ISO] [GO:0005524 "ATP binding"
evidence=ISM] [GO:0005634 "nucleus" evidence=IDA] [GO:0005829
"cytosol" evidence=IDA] [GO:0006511 "ubiquitin-dependent protein
catabolic process" evidence=ISO] [GO:0007346 "regulation of mitotic
cell cycle" evidence=IC] [GO:0008540 "proteasome regulatory
particle, base subcomplex" evidence=ISO] [GO:0016887 "ATPase
activity" evidence=ISO] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 PomBase:SPBC16C6.07c GO:GO:0005829 GO:GO:0005524
GO:GO:0005634 GO:GO:0007346 EMBL:CU329671 GenomeReviews:CU329671_GR
GO:GO:0016887 GO:GO:0004175 GO:GO:0006511 eggNOG:COG1222
TIGRFAMs:TIGR01242 HOGENOM:HOG000225143 GO:GO:0008540 KO:K03061
OMA:DIRWELI PIR:T39558 RefSeq:NP_596805.1 ProteinModelPortal:O42931
IntAct:O42931 STRING:O42931 PRIDE:O42931
EnsemblFungi:SPBC16C6.07c.1 GeneID:2539862 KEGG:spo:SPBC16C6.07c
OrthoDB:EOG4B01XN NextBio:20801008 Uniprot:O42931
Length = 438
Score = 343 (125.8 bits), Expect = 1.0e-34, Sum P(2) = 1.0e-34
Identities = 73/165 (44%), Positives = 100/165 (60%)
Query: 15 FIRVVGSEFVQKYLGEGPRMVRDVFRLAKENSPXXXXXXXXXXXXTKRFDAQTGADREVQ 74
FIRV+GSE VQKY+GEG RMVR++F +A+ RFD G D EVQ
Sbjct: 241 FIRVIGSELVQKYVGEGARMVRELFEMARTKKACIIFFDEIDAIGGARFDDGAGGDNEVQ 300
Query: 75 RILLELLNQMDGFDQTTNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLVFS 134
R +LEL+ Q+DGFD N+KV+ ATNR +TLD AL+RPGR+DRK+EF LPD + +
Sbjct: 301 RTMLELITQLDGFDPRGNIKVLFATNRPNTLDEALMRPGRIDRKVEFGLPDLEGRAHILR 360
Query: 135 TITAKMNLSDEVDLEDYVAR--PDRISGADINAICQEVIMATNRA 177
M + ++ E +AR P + +GA++ ++C E M RA
Sbjct: 361 IHAKSMAIDKDIRWE-LIARLCPSQ-TGAELRSVCTEAGMFAIRA 403
Score = 208 (78.3 bits), Expect = 2.1e-14, P = 2.1e-14
Identities = 48/127 (37%), Positives = 72/127 (56%)
Query: 200 DRRQKRLVFSTITAKMNFMLNIGNLQVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQ 259
D +R + IT F GN++V+ ATNR +TLD AL+RPGR+DRK+EF LPD
Sbjct: 296 DNEVQRTMLELITQLDGFDPR-GNIKVLFATNRPNTLDEALMRPGRIDRKVEFGLPDLEG 354
Query: 260 KRLVFSTITAKMNLSDEVDLEDYVAR--PDRISGADINAICQEAGMHAVRENRYIVLPKD 317
+ + M + ++ E +AR P + +GA++ ++C EAGM A+R R + KD
Sbjct: 355 RAHILRIHAKSMAIDKDIRWE-LIARLCPSQ-TGAELRSVCTEAGMFAIRARRRVATEKD 412
Query: 318 FEKGYKK 324
F +K
Sbjct: 413 FLDAVQK 419
Score = 121 (47.7 bits), Expect = 2.3e-05, Sum P(2) = 2.3e-05
Identities = 22/32 (68%), Positives = 28/32 (87%)
Query: 169 EVIMATNRADTLDPALLRPGRLDRKIEFPLPD 200
+V+ ATNR +TLD AL+RPGR+DRK+EF LPD
Sbjct: 320 KVLFATNRPNTLDEALMRPGRIDRKVEFGLPD 351
Score = 49 (22.3 bits), Expect = 1.0e-34, Sum P(2) = 1.0e-34
Identities = 13/31 (41%), Positives = 16/31 (51%)
Query: 326 AGMHAVRENRYIVLPKDF----EKGYKNNTK 352
AGM A+R R + KDF +K K N K
Sbjct: 396 AGMFAIRARRRVATEKDFLDAVQKVVKGNQK 426
>FB|FBgn0028684 [details] [associations]
symbol:Rpt5 "Regulatory particle triple-A ATPase 5"
species:7227 "Drosophila melanogaster" [GO:0008540 "proteasome
regulatory particle, base subcomplex" evidence=ISS;NAS] [GO:0004175
"endopeptidase activity" evidence=IDA;NAS] [GO:0005838 "proteasome
regulatory particle" evidence=ISS;IDA] [GO:0006508 "proteolysis"
evidence=ISS;IDA] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0009987 "cellular process"
evidence=IMP] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR005937 Pfam:PF00004 SMART:SM00382 GO:GO:0005524
GO:GO:0005737 GO:GO:0006508 GO:GO:0016887 GO:GO:0004175
GO:GO:0030163 HSSP:Q01853 TIGRFAMs:TIGR01242 GO:GO:0008540
ChiTaRS:PSMC3 FlyBase:FBgn0028684 EMBL:AF134402
ProteinModelPortal:Q9XZC3 STRING:Q9XZC3 PRIDE:Q9XZC3
InParanoid:Q9XZC3 ArrayExpress:Q9XZC3 Bgee:Q9XZC3 Uniprot:Q9XZC3
Length = 431
Score = 375 (137.1 bits), Expect = 1.3e-34, P = 1.3e-34
Identities = 76/175 (43%), Positives = 107/175 (61%)
Query: 2 LLCTSFDTELVTAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENSPXXXXXXXXXXXXTK 61
LL + + + F+++ G + VQ ++G+G ++VRD F LAKE +P TK
Sbjct: 228 LLARACAAQTKSTFLKLAGPQLVQMFIGDGAKLVRDAFALAKEKAPAIIFIDELDAIGTK 287
Query: 62 RFDAQTGADREVQRILLELLNQMDGFDQTTNVKVIMATNRADTLDPALLRPGRLDRKIEF 121
RFD++ DREVQR +LELLNQ++GF T ++KVI ATNR D L PALLR GRLDRKIEF
Sbjct: 288 RFDSEKAGDREVQRTMLELLNQLNGFSSTADIKVIAATNRVDIL-PALLRSGRLDRKIEF 346
Query: 122 PLPDRRQKRLVFSTITAKMNLSDEVDLEDYVARPDRISGADINAICQEVIMATNR 176
P P+ + + + KMN+S++V+ E+ D +GA A+C E M R
Sbjct: 347 PHPNEEARARIMQIHSRKMNVSNDVNFEELSRSTDDFNGAQCKAVCVEAGMIALR 401
Score = 215 (80.7 bits), Expect = 2.9e-15, P = 2.9e-15
Identities = 48/119 (40%), Positives = 71/119 (59%)
Query: 200 DRRQKRLVFSTITAKMNFMLNIGNLQVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQ 259
DR +R + + ++N + +++VI ATNR D L PALLR GRLDRKIEFP P+
Sbjct: 296 DREVQRTMLELLN-QLNGFSSTADIKVIAATNRVDIL-PALLRSGRLDRKIEFPHPNEEA 353
Query: 260 KRLVFSTITAKMNLSDEVDLEDYVARPDRISGADINAICQEAGMHAVRENRYIVLPKDF 318
+ + + KMN+S++V+ E+ D +GA A+C EAGM A+R + V +DF
Sbjct: 354 RARIMQIHSRKMNVSNDVNFEELSRSTDDFNGAQCKAVCVEAGMIALRRSANSVTHEDF 412
Score = 122 (48.0 bits), Expect = 0.00013, P = 0.00013
Identities = 27/48 (56%), Positives = 32/48 (66%)
Query: 169 EVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLVFSTITAKMN 216
+VI ATNR D L PALLR GRLDRKIEFP P+ + + + KMN
Sbjct: 320 KVIAATNRVDIL-PALLRSGRLDRKIEFPHPNEEARARIMQIHSRKMN 366
>ASPGD|ASPL0000034636 [details] [associations]
symbol:AN2917 species:162425 "Emericella nidulans"
[GO:0070682 "proteasome regulatory particle assembly" evidence=IEA]
[GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=IEA] [GO:0045732 "positive regulation of protein catabolic
process" evidence=IEA] [GO:0045899 "positive regulation of RNA
polymerase II transcriptional preinitiation complex assembly"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0005829
"cytosol" evidence=IEA] [GO:0008540 "proteasome regulatory
particle, base subcomplex" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005737 EMBL:BN001306
EMBL:AACD01000051 GO:GO:0030163 GO:GO:0017111 eggNOG:COG1222
TIGRFAMs:TIGR01242 HOGENOM:HOG000225143 KO:K03061 OMA:DIRWELI
OrthoDB:EOG4B01XN RefSeq:XP_660521.1 ProteinModelPortal:Q5B963
STRING:Q5B963 EnsemblFungi:CADANIAT00010170 GeneID:2874156
KEGG:ani:AN2917.2 Uniprot:Q5B963
Length = 443
Score = 341 (125.1 bits), Expect = 1.7e-34, Sum P(2) = 1.7e-34
Identities = 77/166 (46%), Positives = 104/166 (62%)
Query: 15 FIRVVGSEFVQKYLGEGPRMVRDVFRLAKENSPXXXXXXXXXXXXTKRFDAQTGADREVQ 74
FIRV+GSE VQKY+GEG RMVR++F +A+ RFD G D EVQ
Sbjct: 247 FIRVIGSELVQKYVGEGARMVRELFEMARTKKACIIFFDEIDAVGGARFDDGAGGDNEVQ 306
Query: 75 RILLELLNQMDGFDQTTNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLVFS 134
R +LEL+ Q+DGFD N+KV+ ATNR TLDPAL+RPGR+DRKIEF LPD + +
Sbjct: 307 RTMLELITQLDGFDARGNIKVMFATNRPSTLDPALMRPGRIDRKIEFSLPDVEGRANILR 366
Query: 135 TITAKMNLSDEVDLE-DYVAR--PDRISGADINAICQEVIMATNRA 177
I AK ++S E D+ + ++R P+ +GA++ ++ E M RA
Sbjct: 367 -IHAK-SMSVERDIRWELISRLCPNA-TGAELRSVATEAGMFAIRA 409
Score = 207 (77.9 bits), Expect = 2.9e-14, P = 2.9e-14
Identities = 51/122 (41%), Positives = 74/122 (60%)
Query: 200 DRRQKRLVFSTITAKMNFMLNIGNLQVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQ 259
D +R + IT F GN++V+ ATNR TLDPAL+RPGR+DRKIEF LPD
Sbjct: 302 DNEVQRTMLELITQLDGFDAR-GNIKVMFATNRPSTLDPALMRPGRIDRKIEFSLPDVEG 360
Query: 260 KRLVFSTITAKMNLSDEVDLE-DYVAR--PDRISGADINAICQEAGMHAVRENRYIVLPK 316
+ + I AK ++S E D+ + ++R P+ +GA++ ++ EAGM A+R R + K
Sbjct: 361 RANILR-IHAK-SMSVERDIRWELISRLCPNA-TGAELRSVATEAGMFAIRARRKVATEK 417
Query: 317 DF 318
DF
Sbjct: 418 DF 419
Score = 129 (50.5 bits), Expect = 3.0e-06, Sum P(2) = 3.0e-06
Identities = 24/32 (75%), Positives = 28/32 (87%)
Query: 169 EVIMATNRADTLDPALLRPGRLDRKIEFPLPD 200
+V+ ATNR TLDPAL+RPGR+DRKIEF LPD
Sbjct: 326 KVMFATNRPSTLDPALMRPGRIDRKIEFSLPD 357
Score = 49 (22.3 bits), Expect = 1.7e-34, Sum P(2) = 1.7e-34
Identities = 13/31 (41%), Positives = 16/31 (51%)
Query: 326 AGMHAVRENRYIVLPKDF----EKGYKNNTK 352
AGM A+R R + KDF +K K N K
Sbjct: 402 AGMFAIRARRKVATEKDFLAAVDKVIKGNLK 432
>UNIPROTKB|O42587 [details] [associations]
symbol:psmc3-a "26S protease regulatory subunit 6A-A"
species:8355 "Xenopus laevis" [GO:0022624 "proteasome accessory
complex" evidence=ISS] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737
GO:GO:0030163 GO:GO:0017111 CTD:4913 TIGRFAMs:TIGR01242 EMBL:Y10461
RefSeq:NP_001080249.1 UniGene:Xl.12803 ProteinModelPortal:O42587
PRIDE:O42587 GeneID:379941 KEGG:xla:379941 Xenbase:XB-GENE-962533
HOVERGEN:HBG000109 KO:K03065 GO:GO:0022624 Uniprot:O42587
Length = 405
Score = 365 (133.5 bits), Expect = 1.5e-33, P = 1.5e-33
Identities = 75/160 (46%), Positives = 101/160 (63%)
Query: 2 LLCTSFDTELVTAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENSPXXXXXXXXXXXXTK 61
LL + + F+++ G + VQ ++G+G ++VRD F LAKE +P TK
Sbjct: 219 LLARACAAQTKATFLKLAGPQLVQMFIGDGAKLVRDAFALAKEKAPSIIFIDELDAIGTK 278
Query: 62 RFDAQTGADREVQRILLELLNQMDGFDQTTNVKVIMATNRADTLDPALLRPGRLDRKIEF 121
RFD++ DREVQR +LELLNQ+DGF VKVI ATNR D LDPALLR GRLDRKIEF
Sbjct: 279 RFDSEKAGDREVQRTMLELLNQLDGFQPNMQVKVIAATNRVDILDPALLRSGRLDRKIEF 338
Query: 122 PLPDRRQKRLVFSTITAKMNLSDEVDLEDYVARPDRISGA 161
P+P+ + + + KMN+S +V+ E+ +AR IS A
Sbjct: 339 PMPNEEARARIMQIHSRKMNVSPDVNYEE-LARCPTISMA 377
Score = 187 (70.9 bits), Expect = 4.9e-12, P = 4.9e-12
Identities = 47/109 (43%), Positives = 64/109 (58%)
Query: 200 DRRQKRLVFSTITAKMNFMLNIGNLQVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQ 259
DR +R + + F N+ ++VI ATNR D LDPALLR GRLDRKIEFP+P+
Sbjct: 287 DREVQRTMLELLNQLDGFQPNM-QVKVIAATNRVDILDPALLRSGRLDRKIEFPMPNEEA 345
Query: 260 KRLVFSTITAKMNLSDEVDLEDYVARPDRISGA-DINAICQEAGMHAVR 307
+ + + KMN+S +V+ E+ +AR IS A EAGM A+R
Sbjct: 346 RARIMQIHSRKMNVSPDVNYEE-LARCPTISMALSAKQFGVEAGMIALR 393
Score = 142 (55.0 bits), Expect = 6.6e-07, P = 6.6e-07
Identities = 28/48 (58%), Positives = 34/48 (70%)
Query: 169 EVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLVFSTITAKMN 216
+VI ATNR D LDPALLR GRLDRKIEFP+P+ + + + KMN
Sbjct: 311 KVIAATNRVDILDPALLRSGRLDRKIEFPMPNEEARARIMQIHSRKMN 358
>ZFIN|ZDB-GENE-030131-5408 [details] [associations]
symbol:vcp "valosin containing protein"
species:7955 "Danio rerio" [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0006974 "response to DNA
damage stimulus" evidence=IEA;ISS] [GO:0016567 "protein
ubiquitination" evidence=ISS] [GO:0035861 "site of double-strand
break" evidence=ISS] [GO:0006302 "double-strand break repair"
evidence=ISS] [GO:0018279 "protein N-linked glycosylation via
asparagine" evidence=ISS] [GO:0019985 "translesion synthesis"
evidence=ISS] [GO:0030433 "ER-associated protein catabolic process"
evidence=ISS] [GO:0009790 "embryo development" evidence=IMP]
[GO:2000058 "regulation of protein ubiquitination involved in
ubiquitin-dependent protein catabolic process" evidence=IMP]
[GO:0005634 "nucleus" evidence=IEA] [GO:0006810 "transport"
evidence=IEA] [GO:0008289 "lipid binding" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0006281 "DNA repair" evidence=IEA]
[GO:0007049 "cell cycle" evidence=IEA] [GO:0005829 "cytosol"
evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 InterPro:IPR003338 Pfam:PF02359
ZFIN:ZDB-GENE-030131-5408 GO:GO:0005829 GO:GO:0005524 GO:GO:0005634
GO:GO:0006810 EMBL:CR318632 GO:GO:0016567 GO:GO:0007049
GO:GO:0008289 GO:GO:0030433 GO:GO:0006302 HSSP:Q01853
eggNOG:COG0464 GO:GO:0017111 GO:GO:0018279 Gene3D:2.40.40.20
InterPro:IPR009010 SUPFAM:SSF50692 InterPro:IPR015415 Pfam:PF09336
HOGENOM:HOG000223224 KO:K13525 InterPro:IPR004201
PANTHER:PTHR23077:SF18 Pfam:PF02933 SMART:SM01072 SMART:SM01073
TIGRFAMs:TIGR01243 OMA:AYRPIHK GeneTree:ENSGT00700000104534
GO:GO:0035861 GO:GO:0019985 CTD:7415 OrthoDB:EOG45TCMK
EMBL:AB093594 EMBL:AY576993 EMBL:BC050488 EMBL:BC067384
IPI:IPI00505091 RefSeq:NP_958889.1 UniGene:Dr.75122
ProteinModelPortal:Q7ZU99 SMR:Q7ZU99 STRING:Q7ZU99 PRIDE:Q7ZU99
Ensembl:ENSDART00000023779 GeneID:327197 KEGG:dre:327197
InParanoid:Q76KA4 NextBio:20809924 Bgee:Q7ZU99 Uniprot:Q7ZU99
Length = 806
Score = 249 (92.7 bits), Expect = 5.1e-19, P = 5.1e-19
Identities = 63/210 (30%), Positives = 103/210 (49%)
Query: 2 LLCTSFDTELVTAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENSPXXXXXXXXXXXXTK 61
LL + E FI + G E + + GE VR++F A++ +P
Sbjct: 526 LLAKAIANECQANFISIKGPELLTMWFGESEANVREIFDKARQAAPCVLFFDELDSIAKA 585
Query: 62 RFDAQTGADREVQRILLELLNQMDGFDQTTNVKVIMATNRADTLDPALLRPGRLDRKIEF 121
R R++ ++L +MDG NV +I ATNR D +DPA+LRPGRLD+ I
Sbjct: 586 RGGNVGDGGGAADRVINQILTEMDGMSSKKNVFIIGATNRPDIIDPAILRPGRLDQLIYI 645
Query: 122 PLPDRRQKRLVFSTITAKMNLSDEVDLEDYVAR-PDRISGADINAICQEVIMATNRADTL 180
PLPD + + + K +S +VDL D++A+ + SGAD+ ICQ R +++
Sbjct: 646 PLPDEKSRIAILKANLRKSPISKDVDL-DFLAKMTNGFSGADLTEICQRACKLAIR-ESI 703
Query: 181 DPALLR-------PGRLDRKIEFPLPDRRQ 203
+ + R P ++ + + P+P+ R+
Sbjct: 704 ENEIRRERERQTNPSAMEVEEDDPVPEIRK 733
Score = 229 (85.7 bits), Expect = 6.4e-33, Sum P(2) = 6.4e-33
Identities = 59/182 (32%), Positives = 89/182 (48%)
Query: 2 LLCTSFDTELVTAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENSPXXXXXXXXXXXXTK 61
L+ + E F + G E + K GE +R F A++N+P K
Sbjct: 253 LIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEAEKNAPAIIFIDELDAIAPK 312
Query: 62 RFDAQTGADREVQRILLELLNQMDGFDQTTNVKVIMATNRADTLDPALLRPGRLDRKIEF 121
R +T + E +RI+ +LL MDG Q +V V+ ATNR +++DPAL R GR DR+++
Sbjct: 313 R--EKTHGEVE-RRIVSQLLTLMDGLKQRAHVIVMAATNRPNSIDPALRRFGRFDREVDI 369
Query: 122 PLPDRRQKRLVFSTITAKMNLSDEVDLEDYVARPDRISGADINAICQEVIMATNRA--DT 179
+PD + + T M L+D+VDLE GAD+ A+C E + R D
Sbjct: 370 GIPDATGRLEILQIHTKNMKLADDVDLEQVANETHGHVGADLAALCSEAALQAIRKKMDL 429
Query: 180 LD 181
+D
Sbjct: 430 ID 431
Score = 198 (74.8 bits), Expect = 6.4e-33, Sum P(2) = 6.4e-33
Identities = 53/158 (33%), Positives = 88/158 (55%)
Query: 207 VFSTITAKMNFMLNIGNLQVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLVFST 266
V + I +M+ M + N+ +I ATNR D +DPA+LRPGRLD+ I PLPD + + +
Sbjct: 600 VINQILTEMDGMSSKKNVFIIGATNRPDIIDPAILRPGRLDQLIYIPLPDEKSRIAILKA 659
Query: 267 ITAKMNLSDEVDLEDYVAR-PDRISGADINAICQEAGMHAVRENRYIVLPKDFEKGYKKC 325
K +S +VDL D++A+ + SGAD+ ICQ A A+RE+ + ++ E+
Sbjct: 660 NLRKSPISKDVDL-DFLAKMTNGFSGADLTEICQRACKLAIRESIENEIRRERERQTNPS 718
Query: 326 AGMHAVRENRYIVLPKD-FEKGYKNNTKKDESEHEFYK 362
A M ++ + KD FE+ + ++ S+++ K
Sbjct: 719 A-MEVEEDDPVPEIRKDHFEEAMRF-ARRSVSDNDIRK 754
Score = 173 (66.0 bits), Expect = 6.8e-10, P = 6.8e-10
Identities = 37/111 (33%), Positives = 64/111 (57%)
Query: 203 QKRLVFSTITAKMNFMLNIGNLQVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRL 262
++R+V +T M+ + ++ V+ ATNR +++DPAL R GR DR+++ +PD +
Sbjct: 321 ERRIVSQLLTL-MDGLKQRAHVIVMAATNRPNSIDPALRRFGRFDREVDIGIPDATGRLE 379
Query: 263 VFSTITAKMNLSDEVDLEDYVARPDRISGADINAICQEAGMHAVRENRYIV 313
+ T M L+D+VDLE GAD+ A+C EA + A+R+ ++
Sbjct: 380 ILQIHTKNMKLADDVDLEQVANETHGHVGADLAALCSEAALQAIRKKMDLI 430
Score = 115 (45.5 bits), Expect = 3.1e-24, Sum P(2) = 3.1e-24
Identities = 21/35 (60%), Positives = 27/35 (77%)
Query: 170 VIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQK 204
+I ATNR D +DPA+LRPGRLD+ I PLPD + +
Sbjct: 619 IIGATNRPDIIDPAILRPGRLDQLIYIPLPDEKSR 653
>FB|FBgn0261014 [details] [associations]
symbol:TER94 "TER94" species:7227 "Drosophila melanogaster"
[GO:0045169 "fusome" evidence=IDA;NAS] [GO:0005737 "cytoplasm"
evidence=IDA] [GO:0016887 "ATPase activity" evidence=NAS]
[GO:0005783 "endoplasmic reticulum" evidence=NAS] [GO:0007030
"Golgi organization" evidence=IMP] [GO:0007317 "regulation of pole
plasm oskar mRNA localization" evidence=IMP] [GO:0016320
"endoplasmic reticulum membrane fusion" evidence=ISS] [GO:0000226
"microtubule cytoskeleton organization" evidence=IMP] [GO:0007029
"endoplasmic reticulum organization" evidence=IMP] [GO:0045451
"pole plasm oskar mRNA localization" evidence=IMP] [GO:0008103
"oocyte microtubule cytoskeleton polarization" evidence=IMP]
[GO:0008104 "protein localization" evidence=IMP] [GO:0042052
"rhabdomere development" evidence=IMP] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0032436 "positive regulation of
proteasomal ubiquitin-dependent protein catabolic process"
evidence=IMP] [GO:0000502 "proteasome complex" evidence=NAS]
[GO:0006508 "proteolysis" evidence=IMP] [GO:0005811 "lipid
particle" evidence=IDA] [GO:0005875 "microtubule associated
complex" evidence=IDA] [GO:0030433 "ER-associated protein catabolic
process" evidence=IMP] [GO:0006200 "ATP catabolic process"
evidence=IGI] [GO:0048813 "dendrite morphogenesis" evidence=IMP]
[GO:0043523 "regulation of neuron apoptotic process" evidence=IMP]
[GO:0005515 "protein binding" evidence=IPI] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=IMP]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
InterPro:IPR003338 Pfam:PF02359 EMBL:AE013599 GO:GO:0007275
GO:GO:0005524 GO:GO:0005634 GO:GO:0005875 GO:GO:0000226
GO:GO:0030154 GO:GO:0005811 GO:GO:0006810 GO:GO:0006200
GO:GO:0048477 GO:GO:0030433 GO:GO:0000502 eggNOG:COG0464
GO:GO:0017111 Gene3D:2.40.40.20 InterPro:IPR009010 SUPFAM:SSF50692
GO:GO:0032436 InterPro:IPR015415 Pfam:PF09336 GO:GO:0007030
GO:GO:0007029 GO:GO:0016320 GO:GO:0045169 KO:K13525
InterPro:IPR004201 PANTHER:PTHR23077:SF18 Pfam:PF02933
SMART:SM01072 SMART:SM01073 TIGRFAMs:TIGR01243
GeneTree:ENSGT00700000104534 GO:GO:0007317 EMBL:AF047037
EMBL:AF202034 EMBL:AF132553 RefSeq:NP_001097249.1
RefSeq:NP_001097250.1 RefSeq:NP_477369.1 UniGene:Dm.2968
ProteinModelPortal:Q7KN62 SMR:Q7KN62 IntAct:Q7KN62 STRING:Q7KN62
PaxDb:Q7KN62 PRIDE:Q7KN62 EnsemblMetazoa:FBtr0088391 GeneID:36040
KEGG:dme:Dmel_CG2331 UCSC:CG2331-RA CTD:36040 FlyBase:FBgn0261014
InParanoid:Q7KN62 OMA:RRGTDVN OrthoDB:EOG4TX96S GenomeRNAi:36040
NextBio:796507 Bgee:Q7KN62 Uniprot:Q7KN62
Length = 801
Score = 254 (94.5 bits), Expect = 6.1e-20, P = 6.1e-20
Identities = 61/168 (36%), Positives = 84/168 (50%)
Query: 2 LLCTSFDTELVTAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENSPXXXXXXXXXXXXTK 61
LL + E FI V G E + + GE VRD+F A+ +P
Sbjct: 523 LLAKAIANECQANFISVKGPELLTMWFGESEANVRDIFDKARSAAPCVLFFDELDSIAKA 582
Query: 62 RFDAQTGADREVQRILLELLNQMDGFDQTTNVKVIMATNRADTLDPALLRPGRLDRKIEF 121
R A R++ ++L +MDG NV +I ATNR D +DPA+LRPGRLD+ I
Sbjct: 583 RGGNVGDAGGAADRVINQILTEMDGMGAKKNVFIIGATNRPDIIDPAILRPGRLDQLIYI 642
Query: 122 PLPDRRQKRLVFSTITAKMNLSDEVDLEDYVARPDR-ISGADINAICQ 168
PLPD + + + K L+ EVDL Y+A+ + SGAD+ ICQ
Sbjct: 643 PLPDDKSREAILKANLRKSPLAKEVDLT-YIAKVTQGFSGADLTEICQ 689
Score = 235 (87.8 bits), Expect = 8.0e-33, Sum P(2) = 8.0e-33
Identities = 63/194 (32%), Positives = 97/194 (50%)
Query: 2 LLCTSFDTELVTAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENSPXXXXXXXXXXXXTK 61
L+ + E F + G E + K GE +R F A++NSP K
Sbjct: 250 LIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEAEKNSPAIIFIDEIDAIAPK 309
Query: 62 RFDAQTGADREVQR-ILLELLNQMDGFDQTTNVKVIMATNRADTLDPALLRPGRLDRKIE 120
R D G EV+R I+ +LL MDG +++++ V+ ATNR +++DPAL R GR DR+I+
Sbjct: 310 R-DKTHG---EVERRIVSQLLTLMDGMKKSSHLIVMAATNRPNSIDPALRRFGRFDREID 365
Query: 121 FPLPDRRQKRLVFSTITAKMNLSDEVDLEDYVARPDRISGADINAICQEVIMATNRADTL 180
+PD + V T M L D+VDLE A GAD+ ++C E + R + +
Sbjct: 366 IGIPDATGRLEVLRIHTKNMKLHDDVDLEQIAAESHGHVGADLASLCSEAALQQIR-EKM 424
Query: 181 DPALLRPGRLDRKI 194
D L ++D ++
Sbjct: 425 DLIDLEDDKIDAEV 438
Score = 189 (71.6 bits), Expect = 8.0e-33, Sum P(2) = 8.0e-33
Identities = 44/103 (42%), Positives = 62/103 (60%)
Query: 207 VFSTITAKMNFMLNIGNLQVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLVFST 266
V + I +M+ M N+ +I ATNR D +DPA+LRPGRLD+ I PLPD + + +
Sbjct: 597 VINQILTEMDGMGAKKNVFIIGATNRPDIIDPAILRPGRLDQLIYIPLPDDKSREAILKA 656
Query: 267 ITAKMNLSDEVDLEDYVARPDR-ISGADINAICQEAGMHAVRE 308
K L+ EVDL Y+A+ + SGAD+ ICQ A A+R+
Sbjct: 657 NLRKSPLAKEVDLT-YIAKVTQGFSGADLTEICQRACKLAIRQ 698
Score = 188 (71.2 bits), Expect = 1.4e-11, P = 1.4e-11
Identities = 47/135 (34%), Positives = 73/135 (54%)
Query: 203 QKRLVFSTITAKMNFMLNIGNLQVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRL 262
++R+V +T M+ M +L V+ ATNR +++DPAL R GR DR+I+ +PD +
Sbjct: 318 ERRIVSQLLTL-MDGMKKSSHLIVMAATNRPNSIDPALRRFGRFDREIDIGIPDATGRLE 376
Query: 263 VFSTITAKMNLSDEVDLEDYVARPDRISGADINAICQEAGMHAVRENRYIVLPKDFEKGY 322
V T M L D+VDLE A GAD+ ++C EA + +RE ++ +D +
Sbjct: 377 VLRIHTKNMKLHDDVDLEQIAAESHGHVGADLASLCSEAALQQIREKMDLIDLEDDKIDA 436
Query: 323 KKCAGMHAVREN-RY 336
+ A + EN RY
Sbjct: 437 EVLASLAVTMENFRY 451
>UNIPROTKB|Q6GL04 [details] [associations]
symbol:vcp "Transitional endoplasmic reticulum ATPase"
species:8364 "Xenopus (Silurana) tropicalis" [GO:0000785
"chromatin" evidence=ISS] [GO:0005634 "nucleus" evidence=ISS]
[GO:0005737 "cytoplasm" evidence=ISS] [GO:0006200 "ATP catabolic
process" evidence=ISS] [GO:0006302 "double-strand break repair"
evidence=ISS] [GO:0006974 "response to DNA damage stimulus"
evidence=ISS] [GO:0016567 "protein ubiquitination" evidence=ISS]
[GO:0016887 "ATPase activity" evidence=ISS] [GO:0018279 "protein
N-linked glycosylation via asparagine" evidence=ISS] [GO:0019985
"translesion synthesis" evidence=ISS] [GO:0030433 "ER-associated
protein catabolic process" evidence=ISS] [GO:0032403 "protein
complex binding" evidence=ISS] [GO:0034214 "protein hexamerization"
evidence=ISS] [GO:0035861 "site of double-strand break"
evidence=ISS] [GO:0035101 "FACT complex" evidence=ISS]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
InterPro:IPR003338 Pfam:PF02359 GO:GO:0005829 GO:GO:0005524
GO:GO:0005634 GO:GO:0005737 GO:GO:0032403 GO:GO:0006810
GO:GO:0000785 GO:GO:0016887 GO:GO:0016567 GO:GO:0008289
GO:GO:0030433 GO:GO:0006302 HSSP:Q01853 eggNOG:COG0464
GO:GO:0018279 Gene3D:2.40.40.20 InterPro:IPR009010 SUPFAM:SSF50692
InterPro:IPR015415 Pfam:PF09336 HOGENOM:HOG000223224 KO:K13525
InterPro:IPR004201 PANTHER:PTHR23077:SF18 Pfam:PF02933
SMART:SM01072 SMART:SM01073 TIGRFAMs:TIGR01243 GO:GO:0034214
GO:GO:0035861 GO:GO:0019985 CTD:7415 OrthoDB:EOG45TCMK
EMBL:BC074716 RefSeq:NP_001005677.1 UniGene:Str.1287
ProteinModelPortal:Q6GL04 SMR:Q6GL04 STRING:Q6GL04 PRIDE:Q6GL04
GeneID:448177 KEGG:xtr:448177 Xenbase:XB-GENE-969573
InParanoid:Q6GL04 Uniprot:Q6GL04
Length = 805
Score = 243 (90.6 bits), Expect = 3.7e-18, P = 3.7e-18
Identities = 62/210 (29%), Positives = 103/210 (49%)
Query: 2 LLCTSFDTELVTAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENSPXXXXXXXXXXXXTK 61
LL + E FI + G E + + GE VR++F A++ +P
Sbjct: 526 LLAKAIANECQANFISIKGPELLTMWFGESEANVREIFDKARQAAPCVLFFDELDSIAKA 585
Query: 62 RFDAQTGADREVQRILLELLNQMDGFDQTTNVKVIMATNRADTLDPALLRPGRLDRKIEF 121
R R++ ++L +MDG NV +I ATNR D +DPA+LRPGRLD+ I
Sbjct: 586 RGGNIGDGGGAADRVINQILTEMDGMSTKKNVFIIGATNRPDIIDPAILRPGRLDQLIYI 645
Query: 122 PLPDRRQKRLVFSTITAKMNLSDEVDLEDYVAR-PDRISGADINAICQEVIMATNRADTL 180
PLPD + + + K ++ +VDL D++A+ + SGAD+ ICQ R +++
Sbjct: 646 PLPDEKSRIAILKANLRKSPVAKDVDL-DFLAKMTNGFSGADLTEICQRACKLAIR-ESI 703
Query: 181 DPALLR-------PGRLDRKIEFPLPDRRQ 203
+ + R P ++ + + P+P+ R+
Sbjct: 704 ENEIRRERERQTNPSAMEVEEDDPVPEIRR 733
Score = 232 (86.7 bits), Expect = 1.3e-32, Sum P(2) = 1.3e-32
Identities = 60/182 (32%), Positives = 89/182 (48%)
Query: 2 LLCTSFDTELVTAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENSPXXXXXXXXXXXXTK 61
L+ + E F + G E + K GE +R F A++N+P K
Sbjct: 253 LIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEAEKNAPAIIFIDELDAIAPK 312
Query: 62 RFDAQTGADREVQRILLELLNQMDGFDQTTNVKVIMATNRADTLDPALLRPGRLDRKIEF 121
R +T + E +RI+ +LL MDG Q +V V+ ATNR +++DPAL R GR DR+++
Sbjct: 313 R--EKTHGEVE-RRIVSQLLTLMDGLKQRAHVIVMAATNRPNSIDPALRRFGRFDREVDI 369
Query: 122 PLPDRRQKRLVFSTITAKMNLSDEVDLEDYVARPDRISGADINAICQEVIMATNRA--DT 179
+PD + + T M LSD+VDLE GAD+ A+C E + R D
Sbjct: 370 GIPDSTGRLEILQIHTKNMKLSDDVDLEQVANETHGHVGADLAALCSEAALQAIRKKMDL 429
Query: 180 LD 181
+D
Sbjct: 430 ID 431
Score = 191 (72.3 bits), Expect = 1.3e-32, Sum P(2) = 1.3e-32
Identities = 43/104 (41%), Positives = 64/104 (61%)
Query: 207 VFSTITAKMNFMLNIGNLQVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLVFST 266
V + I +M+ M N+ +I ATNR D +DPA+LRPGRLD+ I PLPD + + +
Sbjct: 600 VINQILTEMDGMSTKKNVFIIGATNRPDIIDPAILRPGRLDQLIYIPLPDEKSRIAILKA 659
Query: 267 ITAKMNLSDEVDLEDYVAR-PDRISGADINAICQEAGMHAVREN 309
K ++ +VDL D++A+ + SGAD+ ICQ A A+RE+
Sbjct: 660 NLRKSPVAKDVDL-DFLAKMTNGFSGADLTEICQRACKLAIRES 702
Score = 176 (67.0 bits), Expect = 3.1e-10, P = 3.1e-10
Identities = 38/111 (34%), Positives = 64/111 (57%)
Query: 203 QKRLVFSTITAKMNFMLNIGNLQVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRL 262
++R+V +T M+ + ++ V+ ATNR +++DPAL R GR DR+++ +PD +
Sbjct: 321 ERRIVSQLLTL-MDGLKQRAHVIVMAATNRPNSIDPALRRFGRFDREVDIGIPDSTGRLE 379
Query: 263 VFSTITAKMNLSDEVDLEDYVARPDRISGADINAICQEAGMHAVRENRYIV 313
+ T M LSD+VDLE GAD+ A+C EA + A+R+ ++
Sbjct: 380 ILQIHTKNMKLSDDVDLEQVANETHGHVGADLAALCSEAALQAIRKKMDLI 430
Score = 115 (45.5 bits), Expect = 1.2e-24, Sum P(2) = 1.2e-24
Identities = 21/35 (60%), Positives = 27/35 (77%)
Query: 170 VIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQK 204
+I ATNR D +DPA+LRPGRLD+ I PLPD + +
Sbjct: 619 IIGATNRPDIIDPAILRPGRLDQLIYIPLPDEKSR 653
>GENEDB_PFALCIPARUM|PF07_0047 [details] [associations]
symbol:PF07_0047 "cell division cycle ATPase,
putative" species:5833 "Plasmodium falciparum" [GO:0016887 "ATPase
activity" evidence=ISS] [GO:0051726 "regulation of cell cycle"
evidence=ISS] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 InterPro:IPR003338 Pfam:PF02359 GO:GO:0005524
GO:GO:0016887 GO:GO:0007049 GO:GO:0051726 Gene3D:2.40.40.20
InterPro:IPR009010 SUPFAM:SSF50692 PANTHER:PTHR23077:SF18
SMART:SM01073 EMBL:AL844506 EMBL:M96757 RefSeq:XP_001349023.1
ProteinModelPortal:P46468 IntAct:P46468 MINT:MINT-1593477
PRIDE:P46468 EnsemblProtists:PF07_0047:mRNA GeneID:2655095
KEGG:pfa:PF07_0047 EuPathDB:PlasmoDB:PF3D7_0711000 Uniprot:P46468
Length = 1229
Score = 257 (95.5 bits), Expect = 1.1e-20, P = 1.1e-20
Identities = 58/170 (34%), Positives = 87/170 (51%)
Query: 2 LLCTSFDTELVTAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENSPXXXXXXXXXXXXTK 61
LL + E FI V G E + + GE VRD+F A+ SP +
Sbjct: 983 LLAKAIANECKANFISVKGPELLTMWFGESEANVRDLFDKARAASPCIIFFDEIDSLAKE 1042
Query: 62 RFDAQTGADREVQRILLELLNQMDGFDQTTNVKVIMATNRADTLDPALLRPGRLDRKIEF 121
R ++ T D R++ ++L ++DG ++ + +I ATNR D LD AL RPGRLD+ I
Sbjct: 1043 R-NSNTNNDAS-DRVINQILTEIDGINEKKTIFIIAATNRPDILDKALTRPGRLDKLIYI 1100
Query: 122 PLPDRRQKRLVFSTITAKMNLSDEVDLEDYVARPDRISGADINAICQEVI 171
LPD + + +F I L+++VD+ D R + SGADI +CQ +
Sbjct: 1101 SLPDLKSRYSIFKAILKNTPLNEDVDIHDMAKRTEGFSGADITNLCQSAV 1150
Score = 232 (86.7 bits), Expect = 1.7e-32, Sum P(2) = 1.7e-32
Identities = 53/157 (33%), Positives = 86/157 (54%)
Query: 14 AFIRVV-GSEFVQKYLGEGPRMVRDVFRLAKENSPXXXXXXXXXXXXTKRFDAQTGADRE 72
A+ ++ G E + K++GE + +R +F+ A E +P KR +++ + E
Sbjct: 587 AYCYIINGPEIMSKHIGESEQKLRKIFKKASEKTPCIIFIDEIDSIANKR--SKSNNELE 644
Query: 73 VQRILLELLNQMDGFDQTTNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLV 132
+R++ +LL MDG + NV V+ ATNR +++DPAL R GR DR+IE P+PD + + +
Sbjct: 645 -KRVVSQLLTLMDGLKKNNNVLVLAATNRPNSIDPALRRFGRFDREIEIPVPDEQGRYEI 703
Query: 133 FSTITAKMNLSDEVDLEDYVARPDRISGADINAICQE 169
T T KM L +V+L GAD+ +C E
Sbjct: 704 LLTKTKKMKLDPDVNLRKIAKECHGYVGADLAQLCFE 740
Score = 195 (73.7 bits), Expect = 1.7e-32, Sum P(2) = 1.7e-32
Identities = 47/131 (35%), Positives = 71/131 (54%)
Query: 226 VIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLVFSTITAKMNLSDEVDLEDYVAR 285
+I ATNR D LD AL RPGRLD+ I LPD + + +F I L+++VD+ D R
Sbjct: 1074 IIAATNRPDILDKALTRPGRLDKLIYISLPDLKSRYSIFKAILKNTPLNEDVDIHDMAKR 1133
Query: 286 PDRISGADINAICQEAGMHAVRENRYI--VLPKDFEKGYKKCAGMHAVRE-NRYIVLP-- 340
+ SGADI +CQ A A++E ++ + K+ E+ KK + + + Y +P
Sbjct: 1134 TEGFSGADITNLCQSAVNEAIKETIHLLNIRKKEQEEQRKKNKNSFKIDDTDTYDPVPTL 1193
Query: 341 --KDFEKGYKN 349
K F+ +KN
Sbjct: 1194 SKKHFDLAFKN 1204
Score = 176 (67.0 bits), Expect = 5.4e-10, P = 5.4e-10
Identities = 39/107 (36%), Positives = 62/107 (57%)
Query: 203 QKRLVFSTITAKMNFMLNIGNLQVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRL 262
+KR+V +T M+ + N+ V+ ATNR +++DPAL R GR DR+IE P+PD + +
Sbjct: 644 EKRVVSQLLTL-MDGLKKNNNVLVLAATNRPNSIDPALRRFGRFDREIEIPVPDEQGRYE 702
Query: 263 VFSTITAKMNLSDEVDLEDYVARPDRISGADINAICQEAGMHAVREN 309
+ T T KM L +V+L GAD+ +C EA + ++E+
Sbjct: 703 ILLTKTKKMKLDPDVNLRKIAKECHGYVGADLAQLCFEAAIQCIKEH 749
Score = 116 (45.9 bits), Expect = 1.5e-19, Sum P(2) = 1.5e-19
Identities = 26/58 (44%), Positives = 38/58 (65%)
Query: 170 VIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLVFSTITAKMNFMLNIGNLQVI 227
V+ ATNR +++DPAL R GR DR+IE P+PD + + + T T KM ++ NL+ I
Sbjct: 666 VLAATNRPNSIDPALRRFGRFDREIEIPVPDEQGRYEILLTKTKKMKLDPDV-NLRKI 722
Score = 108 (43.1 bits), Expect = 2.2e-23, Sum P(2) = 2.2e-23
Identities = 22/42 (52%), Positives = 27/42 (64%)
Query: 170 VIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLVFSTI 211
+I ATNR D LD AL RPGRLD+ I LPD + + +F I
Sbjct: 1074 IIAATNRPDILDKALTRPGRLDKLIYISLPDLKSRYSIFKAI 1115
>UNIPROTKB|P46468 [details] [associations]
symbol:PF07_0047 "Putative cell division cycle ATPase"
species:36329 "Plasmodium falciparum 3D7" [GO:0006200 "ATP
catabolic process" evidence=ISS] [GO:0016887 "ATPase activity"
evidence=ISS] [GO:0051726 "regulation of cell cycle" evidence=ISS]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
InterPro:IPR003338 Pfam:PF02359 GO:GO:0005524 GO:GO:0016887
GO:GO:0007049 GO:GO:0051726 Gene3D:2.40.40.20 InterPro:IPR009010
SUPFAM:SSF50692 PANTHER:PTHR23077:SF18 SMART:SM01073 EMBL:AL844506
EMBL:M96757 RefSeq:XP_001349023.1 ProteinModelPortal:P46468
IntAct:P46468 MINT:MINT-1593477 PRIDE:P46468
EnsemblProtists:PF07_0047:mRNA GeneID:2655095 KEGG:pfa:PF07_0047
EuPathDB:PlasmoDB:PF3D7_0711000 Uniprot:P46468
Length = 1229
Score = 257 (95.5 bits), Expect = 1.1e-20, P = 1.1e-20
Identities = 58/170 (34%), Positives = 87/170 (51%)
Query: 2 LLCTSFDTELVTAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENSPXXXXXXXXXXXXTK 61
LL + E FI V G E + + GE VRD+F A+ SP +
Sbjct: 983 LLAKAIANECKANFISVKGPELLTMWFGESEANVRDLFDKARAASPCIIFFDEIDSLAKE 1042
Query: 62 RFDAQTGADREVQRILLELLNQMDGFDQTTNVKVIMATNRADTLDPALLRPGRLDRKIEF 121
R ++ T D R++ ++L ++DG ++ + +I ATNR D LD AL RPGRLD+ I
Sbjct: 1043 R-NSNTNNDAS-DRVINQILTEIDGINEKKTIFIIAATNRPDILDKALTRPGRLDKLIYI 1100
Query: 122 PLPDRRQKRLVFSTITAKMNLSDEVDLEDYVARPDRISGADINAICQEVI 171
LPD + + +F I L+++VD+ D R + SGADI +CQ +
Sbjct: 1101 SLPDLKSRYSIFKAILKNTPLNEDVDIHDMAKRTEGFSGADITNLCQSAV 1150
Score = 232 (86.7 bits), Expect = 1.7e-32, Sum P(2) = 1.7e-32
Identities = 53/157 (33%), Positives = 86/157 (54%)
Query: 14 AFIRVV-GSEFVQKYLGEGPRMVRDVFRLAKENSPXXXXXXXXXXXXTKRFDAQTGADRE 72
A+ ++ G E + K++GE + +R +F+ A E +P KR +++ + E
Sbjct: 587 AYCYIINGPEIMSKHIGESEQKLRKIFKKASEKTPCIIFIDEIDSIANKR--SKSNNELE 644
Query: 73 VQRILLELLNQMDGFDQTTNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLV 132
+R++ +LL MDG + NV V+ ATNR +++DPAL R GR DR+IE P+PD + + +
Sbjct: 645 -KRVVSQLLTLMDGLKKNNNVLVLAATNRPNSIDPALRRFGRFDREIEIPVPDEQGRYEI 703
Query: 133 FSTITAKMNLSDEVDLEDYVARPDRISGADINAICQE 169
T T KM L +V+L GAD+ +C E
Sbjct: 704 LLTKTKKMKLDPDVNLRKIAKECHGYVGADLAQLCFE 740
Score = 195 (73.7 bits), Expect = 1.7e-32, Sum P(2) = 1.7e-32
Identities = 47/131 (35%), Positives = 71/131 (54%)
Query: 226 VIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLVFSTITAKMNLSDEVDLEDYVAR 285
+I ATNR D LD AL RPGRLD+ I LPD + + +F I L+++VD+ D R
Sbjct: 1074 IIAATNRPDILDKALTRPGRLDKLIYISLPDLKSRYSIFKAILKNTPLNEDVDIHDMAKR 1133
Query: 286 PDRISGADINAICQEAGMHAVRENRYI--VLPKDFEKGYKKCAGMHAVRE-NRYIVLP-- 340
+ SGADI +CQ A A++E ++ + K+ E+ KK + + + Y +P
Sbjct: 1134 TEGFSGADITNLCQSAVNEAIKETIHLLNIRKKEQEEQRKKNKNSFKIDDTDTYDPVPTL 1193
Query: 341 --KDFEKGYKN 349
K F+ +KN
Sbjct: 1194 SKKHFDLAFKN 1204
Score = 176 (67.0 bits), Expect = 5.4e-10, P = 5.4e-10
Identities = 39/107 (36%), Positives = 62/107 (57%)
Query: 203 QKRLVFSTITAKMNFMLNIGNLQVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRL 262
+KR+V +T M+ + N+ V+ ATNR +++DPAL R GR DR+IE P+PD + +
Sbjct: 644 EKRVVSQLLTL-MDGLKKNNNVLVLAATNRPNSIDPALRRFGRFDREIEIPVPDEQGRYE 702
Query: 263 VFSTITAKMNLSDEVDLEDYVARPDRISGADINAICQEAGMHAVREN 309
+ T T KM L +V+L GAD+ +C EA + ++E+
Sbjct: 703 ILLTKTKKMKLDPDVNLRKIAKECHGYVGADLAQLCFEAAIQCIKEH 749
Score = 116 (45.9 bits), Expect = 1.5e-19, Sum P(2) = 1.5e-19
Identities = 26/58 (44%), Positives = 38/58 (65%)
Query: 170 VIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLVFSTITAKMNFMLNIGNLQVI 227
V+ ATNR +++DPAL R GR DR+IE P+PD + + + T T KM ++ NL+ I
Sbjct: 666 VLAATNRPNSIDPALRRFGRFDREIEIPVPDEQGRYEILLTKTKKMKLDPDV-NLRKI 722
Score = 108 (43.1 bits), Expect = 2.2e-23, Sum P(2) = 2.2e-23
Identities = 22/42 (52%), Positives = 27/42 (64%)
Query: 170 VIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLVFSTI 211
+I ATNR D LD AL RPGRLD+ I LPD + + +F I
Sbjct: 1074 IIAATNRPDILDKALTRPGRLDKLIYISLPDLKSRYSIFKAI 1115
>TAIR|locus:2101933 [details] [associations]
symbol:AtCDC48B "AT3G53230" species:3702 "Arabidopsis
thaliana" [GO:0005524 "ATP binding" evidence=ISS] [GO:0005730
"nucleolus" evidence=IDA] [GO:0046686 "response to cadmium ion"
evidence=IEP] [GO:0005886 "plasma membrane" evidence=IDA]
[GO:0005829 "cytosol" evidence=IDA] [GO:0005794 "Golgi apparatus"
evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005654 "nucleoplasm" evidence=IDA] [GO:0045732 "positive
regulation of protein catabolic process" evidence=IDA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
InterPro:IPR003338 Pfam:PF02359 GO:GO:0005829 GO:GO:0005886
GO:GO:0005524 GO:GO:0005794 GO:GO:0046686 EMBL:CP002686
GenomeReviews:BA000014_GR GO:GO:0005654 GO:GO:0005730 GO:GO:0051301
GO:GO:0005856 GO:GO:0015031 GO:GO:0007049 eggNOG:COG0464
GO:GO:0017111 Gene3D:2.40.40.20 InterPro:IPR009010 SUPFAM:SSF50692
GO:GO:0045732 GO:GO:0009524 EMBL:AL132958 HOGENOM:HOG000223224
KO:K13525 ProtClustDB:CLSN2684913 InterPro:IPR004201
PANTHER:PTHR23077:SF18 Pfam:PF02933 SMART:SM01072 SMART:SM01073
TIGRFAMs:TIGR01243 EMBL:AK228801 IPI:IPI00520856 PIR:T46169
RefSeq:NP_190891.1 UniGene:At.23168 ProteinModelPortal:Q9SCN8
SMR:Q9SCN8 STRING:Q9SCN8 PaxDb:Q9SCN8 PRIDE:Q9SCN8
EnsemblPlants:AT3G53230.1 GeneID:824489 KEGG:ath:AT3G53230
GeneFarm:1909 TAIR:At3g53230 InParanoid:Q9SCN8 OMA:DIRRYEE
PhylomeDB:Q9SCN8 Genevestigator:Q9SCN8 GermOnline:AT3G53230
Uniprot:Q9SCN8
Length = 815
Score = 267 (99.0 bits), Expect = 5.1e-22, P = 5.1e-22
Identities = 60/167 (35%), Positives = 86/167 (51%)
Query: 2 LLCTSFDTELVTAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENSPXXXXXXXXXXXXTK 61
LL + E FI + G E + + GE VR++F A++++P T+
Sbjct: 530 LLAKAIANECQANFISIKGPELLTMWFGESEANVREIFDKARQSAPCVLFFDELDSIATQ 589
Query: 62 RFDAQTGADREVQRILLELLNQMDGFDQTTNVKVIMATNRADTLDPALLRPGRLDRKIEF 121
R ++ A R+L +LL +MDG + V +I ATNR D +DPALLRPGRLD+ I
Sbjct: 590 RGNSVGDAGGAADRVLNQLLTEMDGMNAKKTVFIIGATNRPDIIDPALLRPGRLDQLIYI 649
Query: 122 PLPDRRQKRLVFSTITAKMNLSDEVDLEDYVARPDRISGADINAICQ 168
PLPD + +F + K ++ +VDL SGADI ICQ
Sbjct: 650 PLPDEESRYQIFKSCLRKSPVAKDVDLRALAKYTQGFSGADITEICQ 696
Score = 214 (80.4 bits), Expect = 2.6e-32, Sum P(2) = 2.6e-32
Identities = 61/193 (31%), Positives = 93/193 (48%)
Query: 2 LLCTSFDTELVTAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENSPXXXXXXXXXXXXTK 61
L+ + E F + G E + K GE +R F A++N+P K
Sbjct: 257 LIARAVANETGAFFFCINGPEIMSKLAGESESNLRKAFEEAEKNAPSIIFIDEIDSIAPK 316
Query: 62 RFDAQTGADREVQRILLELLNQMDGFDQTTNVKVIMATNRADTLDPALLRPGRLDRKIEF 121
R +T + E +RI+ +LL MDG +V V+ ATNR +++DPAL R GR DR+I+
Sbjct: 317 R--EKTHGEVE-RRIVSQLLTLMDGLKSRAHVIVMGATNRPNSIDPALRRFGRFDREIDI 373
Query: 122 PLPDRRQKRLVFSTITAKMNLSDEVDLEDYVARPDRISGADINAICQEVIMATNRADTLD 181
+PD + V T M L+++VDLE GAD+ A+C E + R + +D
Sbjct: 374 GVPDEIGRLEVLRIHTKNMKLAEDVDLERVSKDTHGYVGADLAALCTEAALQCIR-EKMD 432
Query: 182 PALLRPGRLDRKI 194
L +D +I
Sbjct: 433 VIDLDDEEIDAEI 445
Score = 211 (79.3 bits), Expect = 2.6e-32, Sum P(2) = 2.6e-32
Identities = 49/128 (38%), Positives = 70/128 (54%)
Query: 207 VFSTITAKMNFMLNIGNLQVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLVFST 266
V + + +M+ M + +I ATNR D +DPALLRPGRLD+ I PLPD + +F +
Sbjct: 604 VLNQLLTEMDGMNAKKTVFIIGATNRPDIIDPALLRPGRLDQLIYIPLPDEESRYQIFKS 663
Query: 267 ITAKMNLSDEVDLEDYVARPDRISGADINAICQEAGMHAVRENRYIVLPKDFEKGYKKCA 326
K ++ +VDL SGADI ICQ + +A+REN + KD EK K+
Sbjct: 664 CLRKSPVAKDVDLRALAKYTQGFSGADITEICQRSCKYAIREN----IEKDIEKERKRAE 719
Query: 327 GMHAVREN 334
A+ E+
Sbjct: 720 SPEAMEED 727
Score = 164 (62.8 bits), Expect = 7.0e-09, P = 7.0e-09
Identities = 38/111 (34%), Positives = 64/111 (57%)
Query: 203 QKRLVFSTITAKMNFMLNIGNLQVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRL 262
++R+V +T M+ + + ++ V+ ATNR +++DPAL R GR DR+I+ +PD +
Sbjct: 325 ERRIVSQLLTL-MDGLKSRAHVIVMGATNRPNSIDPALRRFGRFDREIDIGVPDEIGRLE 383
Query: 263 VFSTITAKMNLSDEVDLEDYVARPDRISGADINAICQEAGMHAVRENRYIV 313
V T M L+++VDLE GAD+ A+C EA + +RE ++
Sbjct: 384 VLRIHTKNMKLAEDVDLERVSKDTHGYVGADLAALCTEAALQCIREKMDVI 434
Score = 123 (48.4 bits), Expect = 0.00024, P = 0.00024
Identities = 24/45 (53%), Positives = 30/45 (66%)
Query: 170 VIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLVFSTITAK 214
+I ATNR D +DPALLRPGRLD+ I PLPD + +F + K
Sbjct: 623 IIGATNRPDIIDPALLRPGRLDQLIYIPLPDEESRYQIFKSCLRK 667
Score = 86 (35.3 bits), Expect = 7.3e-19, Sum P(2) = 7.3e-19
Identities = 17/31 (54%), Positives = 24/31 (77%)
Query: 170 VIMATNRADTLDPALLRPGRLDRKIEFPLPD 200
V+ ATNR +++DPAL R GR DR+I+ +PD
Sbjct: 347 VMGATNRPNSIDPALRRFGRFDREIDIGVPD 377
>UNIPROTKB|G3X757 [details] [associations]
symbol:VCP "Transitional endoplasmic reticulum ATPase"
species:9913 "Bos taurus" [GO:0070842 "aggresome assembly"
evidence=IEA] [GO:0045732 "positive regulation of protein catabolic
process" evidence=IEA] [GO:0035861 "site of double-strand break"
evidence=IEA] [GO:0031593 "polyubiquitin binding" evidence=IEA]
[GO:0031334 "positive regulation of protein complex assembly"
evidence=IEA] [GO:0030970 "retrograde protein transport, ER to
cytosol" evidence=IEA] [GO:0019904 "protein domain specific
binding" evidence=IEA] [GO:0019903 "protein phosphatase binding"
evidence=IEA] [GO:0018279 "protein N-linked glycosylation via
asparagine" evidence=IEA] [GO:0006919 "activation of cysteine-type
endopeptidase activity involved in apoptotic process" evidence=IEA]
[GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=IEA] [GO:0006302 "double-strand break repair"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0000502 "proteasome complex"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
InterPro:IPR003338 Pfam:PF02359 GO:GO:0005524 GO:GO:0005634
GO:GO:0005737 GO:GO:0031334 GO:GO:0006919 GO:GO:0006302
GO:GO:0000502 GO:GO:0006511 GO:GO:0017111 Gene3D:2.40.40.20
InterPro:IPR009010 SUPFAM:SSF50692 InterPro:IPR015415 Pfam:PF09336
GO:GO:0045732 InterPro:IPR004201 PANTHER:PTHR23077:SF18
Pfam:PF02933 SMART:SM01072 SMART:SM01073 TIGRFAMs:TIGR01243
OMA:AYRPIHK GO:GO:0030970 GeneTree:ENSGT00700000104534
GO:GO:0070842 UniGene:Bt.49331 EMBL:DAAA02023126
ProteinModelPortal:G3X757 Ensembl:ENSBTAT00000019970 Uniprot:G3X757
Length = 806
Score = 245 (91.3 bits), Expect = 1.9e-18, P = 1.9e-18
Identities = 61/209 (29%), Positives = 99/209 (47%)
Query: 2 LLCTSFDTELVTAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENSPXXXXXXXXXXXXTK 61
LL + E FI + G E + + GE VR++F A++ +P
Sbjct: 526 LLAKAIANECQANFISIKGPELLTMWFGESEANVREIFDKARQAAPCVLFFDELDSIAKA 585
Query: 62 RFDAQTGADREVQRILLELLNQMDGFDQTTNVKVIMATNRADTLDPALLRPGRLDRKIEF 121
R R++ ++L +MDG NV +I ATNR D +DPA+LRPGRLD+ I
Sbjct: 586 RGGNIGDGGGAADRVINQILTEMDGMSTKKNVFIIGATNRPDIIDPAILRPGRLDQLIYI 645
Query: 122 PLPDRRQKRLVFSTITAKMNLSDEVDLEDYVARPDRISGADINAICQEVIMATNRADTLD 181
PLPD + + + K ++ +VDLE + SGAD+ ICQ R ++++
Sbjct: 646 PLPDEKSRVAILKANLRKSPVAKDVDLEFLAKMTNGFSGADLTEICQRACKLAIR-ESIE 704
Query: 182 PALLR-------PGRLDRKIEFPLPDRRQ 203
+ R P ++ + + P+P+ R+
Sbjct: 705 SEIRRERERQTNPSAMEVEEDDPVPEIRR 733
Score = 229 (85.7 bits), Expect = 2.7e-32, Sum P(2) = 2.7e-32
Identities = 59/182 (32%), Positives = 89/182 (48%)
Query: 2 LLCTSFDTELVTAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENSPXXXXXXXXXXXXTK 61
L+ + E F + G E + K GE +R F A++N+P K
Sbjct: 253 LIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEAEKNAPAIIFIDELDAIAPK 312
Query: 62 RFDAQTGADREVQRILLELLNQMDGFDQTTNVKVIMATNRADTLDPALLRPGRLDRKIEF 121
R +T + E +RI+ +LL MDG Q +V V+ ATNR +++DPAL R GR DR+++
Sbjct: 313 R--EKTHGEVE-RRIVSQLLTLMDGLKQRAHVIVMAATNRPNSIDPALRRFGRFDREVDI 369
Query: 122 PLPDRRQKRLVFSTITAKMNLSDEVDLEDYVARPDRISGADINAICQEVIMATNRA--DT 179
+PD + + T M L+D+VDLE GAD+ A+C E + R D
Sbjct: 370 GIPDATGRLEILQIHTKNMKLADDVDLEQVANETHGHVGADLAALCSEAALQAIRKKMDL 429
Query: 180 LD 181
+D
Sbjct: 430 ID 431
Score = 192 (72.6 bits), Expect = 2.7e-32, Sum P(2) = 2.7e-32
Identities = 42/103 (40%), Positives = 60/103 (58%)
Query: 207 VFSTITAKMNFMLNIGNLQVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLVFST 266
V + I +M+ M N+ +I ATNR D +DPA+LRPGRLD+ I PLPD + + +
Sbjct: 600 VINQILTEMDGMSTKKNVFIIGATNRPDIIDPAILRPGRLDQLIYIPLPDEKSRVAILKA 659
Query: 267 ITAKMNLSDEVDLEDYVARPDRISGADINAICQEAGMHAVREN 309
K ++ +VDLE + SGAD+ ICQ A A+RE+
Sbjct: 660 NLRKSPVAKDVDLEFLAKMTNGFSGADLTEICQRACKLAIRES 702
Score = 173 (66.0 bits), Expect = 6.8e-10, P = 6.8e-10
Identities = 37/111 (33%), Positives = 64/111 (57%)
Query: 203 QKRLVFSTITAKMNFMLNIGNLQVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRL 262
++R+V +T M+ + ++ V+ ATNR +++DPAL R GR DR+++ +PD +
Sbjct: 321 ERRIVSQLLTL-MDGLKQRAHVIVMAATNRPNSIDPALRRFGRFDREVDIGIPDATGRLE 379
Query: 263 VFSTITAKMNLSDEVDLEDYVARPDRISGADINAICQEAGMHAVRENRYIV 313
+ T M L+D+VDLE GAD+ A+C EA + A+R+ ++
Sbjct: 380 ILQIHTKNMKLADDVDLEQVANETHGHVGADLAALCSEAALQAIRKKMDLI 430
Score = 115 (45.5 bits), Expect = 3.1e-24, Sum P(2) = 3.1e-24
Identities = 21/35 (60%), Positives = 27/35 (77%)
Query: 170 VIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQK 204
+I ATNR D +DPA+LRPGRLD+ I PLPD + +
Sbjct: 619 IIGATNRPDIIDPAILRPGRLDQLIYIPLPDEKSR 653
>UNIPROTKB|Q3ZBT1 [details] [associations]
symbol:VCP "Transitional endoplasmic reticulum ATPase"
species:9913 "Bos taurus" [GO:0019985 "translesion synthesis"
evidence=ISS] [GO:0016567 "protein ubiquitination" evidence=ISS]
[GO:0006974 "response to DNA damage stimulus" evidence=ISS]
[GO:0006302 "double-strand break repair" evidence=ISS] [GO:0035861
"site of double-strand break" evidence=ISS] [GO:0018279 "protein
N-linked glycosylation via asparagine" evidence=ISS] [GO:0030433
"ER-associated protein catabolic process" evidence=ISS] [GO:0005829
"cytosol" evidence=IEA] [GO:0005783 "endoplasmic reticulum"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0008289
"lipid binding" evidence=IEA] [GO:0006810 "transport" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
InterPro:IPR003338 Pfam:PF02359 GO:GO:0005783 GO:GO:0005829
GO:GO:0005524 GO:GO:0005634 GO:GO:0006810 GO:GO:0016567
GO:GO:0008289 GO:GO:0030433 GO:GO:0006302 HSSP:Q01853
eggNOG:COG0464 GO:GO:0017111 GO:GO:0018279 Gene3D:2.40.40.20
InterPro:IPR009010 SUPFAM:SSF50692 InterPro:IPR015415 Pfam:PF09336
HOGENOM:HOG000223224 KO:K13525 InterPro:IPR004201
PANTHER:PTHR23077:SF18 Pfam:PF02933 SMART:SM01072 SMART:SM01073
TIGRFAMs:TIGR01243 GO:GO:0035861 GO:GO:0019985 HOVERGEN:HBG001226
EMBL:BC103125 IPI:IPI00710727 RefSeq:NP_001029466.1
UniGene:Bt.49331 ProteinModelPortal:Q3ZBT1 SMR:Q3ZBT1 IntAct:Q3ZBT1
STRING:Q3ZBT1 PRIDE:Q3ZBT1 GeneID:507345 KEGG:bta:507345 CTD:7415
InParanoid:Q3ZBT1 OrthoDB:EOG45TCMK NextBio:20868019 Uniprot:Q3ZBT1
Length = 806
Score = 245 (91.3 bits), Expect = 1.9e-18, P = 1.9e-18
Identities = 61/209 (29%), Positives = 99/209 (47%)
Query: 2 LLCTSFDTELVTAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENSPXXXXXXXXXXXXTK 61
LL + E FI + G E + + GE VR++F A++ +P
Sbjct: 526 LLAKAIANECQANFISIKGPELLTMWFGESEANVREIFDKARQAAPCVLFFDELDSIAKA 585
Query: 62 RFDAQTGADREVQRILLELLNQMDGFDQTTNVKVIMATNRADTLDPALLRPGRLDRKIEF 121
R R++ ++L +MDG NV +I ATNR D +DPA+LRPGRLD+ I
Sbjct: 586 RGGNIGDGGGAADRVINQILTEMDGMSTKKNVFIIGATNRPDIIDPAILRPGRLDQLIYI 645
Query: 122 PLPDRRQKRLVFSTITAKMNLSDEVDLEDYVARPDRISGADINAICQEVIMATNRADTLD 181
PLPD + + + K ++ +VDLE + SGAD+ ICQ R ++++
Sbjct: 646 PLPDEKSRVAILKANLRKSPVAKDVDLEFLAKMTNGFSGADLTEICQRACKLAIR-ESIE 704
Query: 182 PALLR-------PGRLDRKIEFPLPDRRQ 203
+ R P ++ + + P+P+ R+
Sbjct: 705 SEIRRERERQTNPSAMEVEEDDPVPEIRR 733
Score = 229 (85.7 bits), Expect = 2.7e-32, Sum P(2) = 2.7e-32
Identities = 59/182 (32%), Positives = 89/182 (48%)
Query: 2 LLCTSFDTELVTAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENSPXXXXXXXXXXXXTK 61
L+ + E F + G E + K GE +R F A++N+P K
Sbjct: 253 LIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEAEKNAPAIIFIDELDAIAPK 312
Query: 62 RFDAQTGADREVQRILLELLNQMDGFDQTTNVKVIMATNRADTLDPALLRPGRLDRKIEF 121
R +T + E +RI+ +LL MDG Q +V V+ ATNR +++DPAL R GR DR+++
Sbjct: 313 R--EKTHGEVE-RRIVSQLLTLMDGLKQRAHVIVMAATNRPNSIDPALRRFGRFDREVDI 369
Query: 122 PLPDRRQKRLVFSTITAKMNLSDEVDLEDYVARPDRISGADINAICQEVIMATNRA--DT 179
+PD + + T M L+D+VDLE GAD+ A+C E + R D
Sbjct: 370 GIPDATGRLEILQIHTKNMKLADDVDLEQVANETHGHVGADLAALCSEAALQAIRKKMDL 429
Query: 180 LD 181
+D
Sbjct: 430 ID 431
Score = 192 (72.6 bits), Expect = 2.7e-32, Sum P(2) = 2.7e-32
Identities = 42/103 (40%), Positives = 60/103 (58%)
Query: 207 VFSTITAKMNFMLNIGNLQVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLVFST 266
V + I +M+ M N+ +I ATNR D +DPA+LRPGRLD+ I PLPD + + +
Sbjct: 600 VINQILTEMDGMSTKKNVFIIGATNRPDIIDPAILRPGRLDQLIYIPLPDEKSRVAILKA 659
Query: 267 ITAKMNLSDEVDLEDYVARPDRISGADINAICQEAGMHAVREN 309
K ++ +VDLE + SGAD+ ICQ A A+RE+
Sbjct: 660 NLRKSPVAKDVDLEFLAKMTNGFSGADLTEICQRACKLAIRES 702
Score = 173 (66.0 bits), Expect = 6.8e-10, P = 6.8e-10
Identities = 37/111 (33%), Positives = 64/111 (57%)
Query: 203 QKRLVFSTITAKMNFMLNIGNLQVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRL 262
++R+V +T M+ + ++ V+ ATNR +++DPAL R GR DR+++ +PD +
Sbjct: 321 ERRIVSQLLTL-MDGLKQRAHVIVMAATNRPNSIDPALRRFGRFDREVDIGIPDATGRLE 379
Query: 263 VFSTITAKMNLSDEVDLEDYVARPDRISGADINAICQEAGMHAVRENRYIV 313
+ T M L+D+VDLE GAD+ A+C EA + A+R+ ++
Sbjct: 380 ILQIHTKNMKLADDVDLEQVANETHGHVGADLAALCSEAALQAIRKKMDLI 430
Score = 115 (45.5 bits), Expect = 3.1e-24, Sum P(2) = 3.1e-24
Identities = 21/35 (60%), Positives = 27/35 (77%)
Query: 170 VIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQK 204
+I ATNR D +DPA+LRPGRLD+ I PLPD + +
Sbjct: 619 IIGATNRPDIIDPAILRPGRLDQLIYIPLPDEKSR 653
>UNIPROTKB|P55072 [details] [associations]
symbol:VCP "Transitional endoplasmic reticulum ATPase"
species:9606 "Homo sapiens" [GO:0008289 "lipid binding"
evidence=IEA] [GO:0005102 "receptor binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0006888 "ER to Golgi
vesicle-mediated transport" evidence=IEA] [GO:0032403 "protein
complex binding" evidence=IEA] [GO:0042802 "identical protein
binding" evidence=IEA] [GO:0051260 "protein homooligomerization"
evidence=IEA] [GO:0070842 "aggresome assembly" evidence=IEA]
[GO:0043231 "intracellular membrane-bounded organelle"
evidence=ISS] [GO:0006919 "activation of cysteine-type
endopeptidase activity involved in apoptotic process" evidence=ISS]
[GO:0006281 "DNA repair" evidence=NAS] [GO:0006974 "response to DNA
damage stimulus" evidence=IDA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0005634 "nucleus" evidence=IDA;TAS] [GO:0005829
"cytosol" evidence=IDA] [GO:0006302 "double-strand break repair"
evidence=IDA] [GO:0019904 "protein domain specific binding"
evidence=IPI] [GO:0043161 "proteasomal ubiquitin-dependent protein
catabolic process" evidence=NAS] [GO:0030970 "retrograde protein
transport, ER to cytosol" evidence=IDA] [GO:0030433 "ER-associated
protein catabolic process" evidence=IMP;TAS] [GO:0030968
"endoplasmic reticulum unfolded protein response" evidence=TAS]
[GO:0016887 "ATPase activity" evidence=TAS] [GO:0005783
"endoplasmic reticulum" evidence=IDA] [GO:0016567 "protein
ubiquitination" evidence=IDA;NAS] [GO:0042981 "regulation of
apoptotic process" evidence=TAS] [GO:0045184 "establishment of
protein localization" evidence=TAS] [GO:0019985 "translesion
synthesis" evidence=IMP] [GO:0035861 "site of double-strand break"
evidence=IDA] [GO:0018279 "protein N-linked glycosylation via
asparagine" evidence=IMP] [GO:0032436 "positive regulation of
proteasomal ubiquitin-dependent protein catabolic process"
evidence=IDA] [GO:0000502 "proteasome complex" evidence=IDA]
[GO:0019903 "protein phosphatase binding" evidence=IPI] [GO:0045732
"positive regulation of protein catabolic process" evidence=IDA]
[GO:0031334 "positive regulation of protein complex assembly"
evidence=IDA] [GO:0031593 "polyubiquitin binding" evidence=IDA]
[GO:0005730 "nucleolus" evidence=IDA] [GO:0005737 "cytoplasm"
evidence=IDA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 InterPro:IPR003338 Pfam:PF02359 GO:GO:0005783
GO:GO:0005829 GO:GO:0005524 GO:GO:0005634 GO:GO:0031334
GO:GO:0051260 GO:GO:0016887 GO:GO:0016567 GO:GO:0008289
GO:GO:0006919 EMBL:CH471071 GO:GO:0030433 GO:GO:0006302
GO:GO:0000502 eggNOG:COG0464 GO:GO:0018279 GO:GO:0031593
GO:GO:0006888 Gene3D:2.40.40.20 InterPro:IPR009010 SUPFAM:SSF50692
GO:GO:0032436 InterPro:IPR015415 Pfam:PF09336 Orphanet:803 PDB:3TIW
PDBsum:3TIW GO:GO:0030968 HOGENOM:HOG000223224 KO:K13525
InterPro:IPR004201 PANTHER:PTHR23077:SF18 Pfam:PF02933
SMART:SM01072 SMART:SM01073 TIGRFAMs:TIGR01243 OMA:AYRPIHK
GO:GO:0030970 TCDB:3.A.16.1.1 GO:GO:0070842 GO:GO:0035861
GO:GO:0019985 EMBL:AC004472 EMBL:AL353795 PDB:3QC8 PDB:3QQ8
PDB:3QWZ PDBsum:3QC8 PDBsum:3QQ8 PDBsum:3QWZ HOVERGEN:HBG001226
PDB:3EBB PDBsum:3EBB CTD:7415 OrthoDB:EOG45TCMK EMBL:AF100752
EMBL:AK312310 EMBL:BC110913 EMBL:BC121794 EMBL:Z70768
IPI:IPI00022774 PIR:T02243 RefSeq:NP_009057.1 UniGene:Hs.529782
PDB:3HU1 PDB:3HU2 PDB:3HU3 PDB:3QQ7 PDBsum:3HU1 PDBsum:3HU2
PDBsum:3HU3 PDBsum:3QQ7 ProteinModelPortal:P55072 SMR:P55072
DIP:DIP-33543N IntAct:P55072 MINT:MINT-272884 STRING:P55072
PhosphoSite:P55072 DMDM:6094447 DOSAC-COBS-2DPAGE:P55072 OGP:P55072
REPRODUCTION-2DPAGE:IPI00022774 REPRODUCTION-2DPAGE:P55072
PaxDb:P55072 PRIDE:P55072 Ensembl:ENST00000358901 GeneID:7415
KEGG:hsa:7415 UCSC:uc003zvy.2 GeneCards:GC09M035056 HGNC:HGNC:12666
HPA:CAB005593 HPA:HPA012728 HPA:HPA012814 MIM:167320 MIM:601023
MIM:613954 neXtProt:NX_P55072 Orphanet:52430 PharmGKB:PA37289
InParanoid:P55072 BindingDB:P55072 ChEMBL:CHEMBL1075145 ChiTaRS:VCP
EvolutionaryTrace:P55072 GenomeRNAi:7415 NextBio:29034
ArrayExpress:P55072 Bgee:P55072 CleanEx:HS_VCP
Genevestigator:P55072 GermOnline:ENSG00000165280 Uniprot:P55072
Length = 806
Score = 245 (91.3 bits), Expect = 1.9e-18, P = 1.9e-18
Identities = 61/209 (29%), Positives = 99/209 (47%)
Query: 2 LLCTSFDTELVTAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENSPXXXXXXXXXXXXTK 61
LL + E FI + G E + + GE VR++F A++ +P
Sbjct: 526 LLAKAIANECQANFISIKGPELLTMWFGESEANVREIFDKARQAAPCVLFFDELDSIAKA 585
Query: 62 RFDAQTGADREVQRILLELLNQMDGFDQTTNVKVIMATNRADTLDPALLRPGRLDRKIEF 121
R R++ ++L +MDG NV +I ATNR D +DPA+LRPGRLD+ I
Sbjct: 586 RGGNIGDGGGAADRVINQILTEMDGMSTKKNVFIIGATNRPDIIDPAILRPGRLDQLIYI 645
Query: 122 PLPDRRQKRLVFSTITAKMNLSDEVDLEDYVARPDRISGADINAICQEVIMATNRADTLD 181
PLPD + + + K ++ +VDLE + SGAD+ ICQ R ++++
Sbjct: 646 PLPDEKSRVAILKANLRKSPVAKDVDLEFLAKMTNGFSGADLTEICQRACKLAIR-ESIE 704
Query: 182 PALLR-------PGRLDRKIEFPLPDRRQ 203
+ R P ++ + + P+P+ R+
Sbjct: 705 SEIRRERERQTNPSAMEVEEDDPVPEIRR 733
Score = 229 (85.7 bits), Expect = 2.7e-32, Sum P(2) = 2.7e-32
Identities = 59/182 (32%), Positives = 89/182 (48%)
Query: 2 LLCTSFDTELVTAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENSPXXXXXXXXXXXXTK 61
L+ + E F + G E + K GE +R F A++N+P K
Sbjct: 253 LIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEAEKNAPAIIFIDELDAIAPK 312
Query: 62 RFDAQTGADREVQRILLELLNQMDGFDQTTNVKVIMATNRADTLDPALLRPGRLDRKIEF 121
R +T + E +RI+ +LL MDG Q +V V+ ATNR +++DPAL R GR DR+++
Sbjct: 313 R--EKTHGEVE-RRIVSQLLTLMDGLKQRAHVIVMAATNRPNSIDPALRRFGRFDREVDI 369
Query: 122 PLPDRRQKRLVFSTITAKMNLSDEVDLEDYVARPDRISGADINAICQEVIMATNRA--DT 179
+PD + + T M L+D+VDLE GAD+ A+C E + R D
Sbjct: 370 GIPDATGRLEILQIHTKNMKLADDVDLEQVANETHGHVGADLAALCSEAALQAIRKKMDL 429
Query: 180 LD 181
+D
Sbjct: 430 ID 431
Score = 192 (72.6 bits), Expect = 2.7e-32, Sum P(2) = 2.7e-32
Identities = 42/103 (40%), Positives = 60/103 (58%)
Query: 207 VFSTITAKMNFMLNIGNLQVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLVFST 266
V + I +M+ M N+ +I ATNR D +DPA+LRPGRLD+ I PLPD + + +
Sbjct: 600 VINQILTEMDGMSTKKNVFIIGATNRPDIIDPAILRPGRLDQLIYIPLPDEKSRVAILKA 659
Query: 267 ITAKMNLSDEVDLEDYVARPDRISGADINAICQEAGMHAVREN 309
K ++ +VDLE + SGAD+ ICQ A A+RE+
Sbjct: 660 NLRKSPVAKDVDLEFLAKMTNGFSGADLTEICQRACKLAIRES 702
Score = 173 (66.0 bits), Expect = 6.8e-10, P = 6.8e-10
Identities = 37/111 (33%), Positives = 64/111 (57%)
Query: 203 QKRLVFSTITAKMNFMLNIGNLQVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRL 262
++R+V +T M+ + ++ V+ ATNR +++DPAL R GR DR+++ +PD +
Sbjct: 321 ERRIVSQLLTL-MDGLKQRAHVIVMAATNRPNSIDPALRRFGRFDREVDIGIPDATGRLE 379
Query: 263 VFSTITAKMNLSDEVDLEDYVARPDRISGADINAICQEAGMHAVRENRYIV 313
+ T M L+D+VDLE GAD+ A+C EA + A+R+ ++
Sbjct: 380 ILQIHTKNMKLADDVDLEQVANETHGHVGADLAALCSEAALQAIRKKMDLI 430
Score = 115 (45.5 bits), Expect = 3.1e-24, Sum P(2) = 3.1e-24
Identities = 21/35 (60%), Positives = 27/35 (77%)
Query: 170 VIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQK 204
+I ATNR D +DPA+LRPGRLD+ I PLPD + +
Sbjct: 619 IIGATNRPDIIDPAILRPGRLDQLIYIPLPDEKSR 653
>UNIPROTKB|P03974 [details] [associations]
symbol:VCP "Transitional endoplasmic reticulum ATPase"
species:9823 "Sus scrofa" [GO:0019985 "translesion synthesis"
evidence=ISS] [GO:0016567 "protein ubiquitination" evidence=ISS]
[GO:0006974 "response to DNA damage stimulus" evidence=ISS]
[GO:0035861 "site of double-strand break" evidence=ISS] [GO:0006302
"double-strand break repair" evidence=ISS] [GO:0018279 "protein
N-linked glycosylation via asparagine" evidence=ISS] [GO:0030433
"ER-associated protein catabolic process" evidence=ISS] [GO:0005829
"cytosol" evidence=IEA] [GO:0005783 "endoplasmic reticulum"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0008289
"lipid binding" evidence=IEA] [GO:0006810 "transport" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
InterPro:IPR003338 Pfam:PF02359 GO:GO:0005783 GO:GO:0005829
GO:GO:0005524 GO:GO:0005634 GO:GO:0006810 GO:GO:0016567
GO:GO:0008289 GO:GO:0030433 GO:GO:0006302 eggNOG:COG0464
GO:GO:0017111 GO:GO:0018279 Gene3D:2.40.40.20 InterPro:IPR009010
SUPFAM:SSF50692 InterPro:IPR015415 Pfam:PF09336
HOGENOM:HOG000223224 KO:K13525 InterPro:IPR004201
PANTHER:PTHR23077:SF18 Pfam:PF02933 SMART:SM01072 SMART:SM01073
TIGRFAMs:TIGR01243 GO:GO:0035861 GO:GO:0019985 HOVERGEN:HBG001226
CTD:7415 OrthoDB:EOG45TCMK EMBL:M30143 PIR:A26360
RefSeq:NP_999445.1 UniGene:Ssc.856 ProteinModelPortal:P03974
SMR:P03974 STRING:P03974 GeneID:397524 KEGG:ssc:397524
Uniprot:P03974
Length = 806
Score = 245 (91.3 bits), Expect = 1.9e-18, P = 1.9e-18
Identities = 61/209 (29%), Positives = 99/209 (47%)
Query: 2 LLCTSFDTELVTAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENSPXXXXXXXXXXXXTK 61
LL + E FI + G E + + GE VR++F A++ +P
Sbjct: 526 LLAKAIANECQANFISIKGPELLTMWFGESEANVREIFDKARQAAPCVLFFDELDSIAKA 585
Query: 62 RFDAQTGADREVQRILLELLNQMDGFDQTTNVKVIMATNRADTLDPALLRPGRLDRKIEF 121
R R++ ++L +MDG NV +I ATNR D +DPA+LRPGRLD+ I
Sbjct: 586 RGGNIGDGGGAADRVINQILTEMDGMSTKKNVFIIGATNRPDIIDPAILRPGRLDQLIYI 645
Query: 122 PLPDRRQKRLVFSTITAKMNLSDEVDLEDYVARPDRISGADINAICQEVIMATNRADTLD 181
PLPD + + + K ++ +VDLE + SGAD+ ICQ R ++++
Sbjct: 646 PLPDEKSRVAILKANLRKSPVAKDVDLEFLAKMTNGFSGADLTEICQRACKLAIR-ESIE 704
Query: 182 PALLR-------PGRLDRKIEFPLPDRRQ 203
+ R P ++ + + P+P+ R+
Sbjct: 705 SEIRRERERQTNPSAMEVEEDDPVPEIRR 733
Score = 229 (85.7 bits), Expect = 2.7e-32, Sum P(2) = 2.7e-32
Identities = 59/182 (32%), Positives = 89/182 (48%)
Query: 2 LLCTSFDTELVTAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENSPXXXXXXXXXXXXTK 61
L+ + E F + G E + K GE +R F A++N+P K
Sbjct: 253 LIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEAEKNAPAIIFIDELDAIAPK 312
Query: 62 RFDAQTGADREVQRILLELLNQMDGFDQTTNVKVIMATNRADTLDPALLRPGRLDRKIEF 121
R +T + E +RI+ +LL MDG Q +V V+ ATNR +++DPAL R GR DR+++
Sbjct: 313 R--EKTHGEVE-RRIVSQLLTLMDGLKQRAHVIVMAATNRPNSIDPALRRFGRFDREVDI 369
Query: 122 PLPDRRQKRLVFSTITAKMNLSDEVDLEDYVARPDRISGADINAICQEVIMATNRA--DT 179
+PD + + T M L+D+VDLE GAD+ A+C E + R D
Sbjct: 370 GIPDATGRLEILQIHTKNMKLADDVDLEQVANETHGHVGADLAALCSEAALQAIRKKMDL 429
Query: 180 LD 181
+D
Sbjct: 430 ID 431
Score = 192 (72.6 bits), Expect = 2.7e-32, Sum P(2) = 2.7e-32
Identities = 42/103 (40%), Positives = 60/103 (58%)
Query: 207 VFSTITAKMNFMLNIGNLQVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLVFST 266
V + I +M+ M N+ +I ATNR D +DPA+LRPGRLD+ I PLPD + + +
Sbjct: 600 VINQILTEMDGMSTKKNVFIIGATNRPDIIDPAILRPGRLDQLIYIPLPDEKSRVAILKA 659
Query: 267 ITAKMNLSDEVDLEDYVARPDRISGADINAICQEAGMHAVREN 309
K ++ +VDLE + SGAD+ ICQ A A+RE+
Sbjct: 660 NLRKSPVAKDVDLEFLAKMTNGFSGADLTEICQRACKLAIRES 702
Score = 173 (66.0 bits), Expect = 6.8e-10, P = 6.8e-10
Identities = 37/111 (33%), Positives = 64/111 (57%)
Query: 203 QKRLVFSTITAKMNFMLNIGNLQVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRL 262
++R+V +T M+ + ++ V+ ATNR +++DPAL R GR DR+++ +PD +
Sbjct: 321 ERRIVSQLLTL-MDGLKQRAHVIVMAATNRPNSIDPALRRFGRFDREVDIGIPDATGRLE 379
Query: 263 VFSTITAKMNLSDEVDLEDYVARPDRISGADINAICQEAGMHAVRENRYIV 313
+ T M L+D+VDLE GAD+ A+C EA + A+R+ ++
Sbjct: 380 ILQIHTKNMKLADDVDLEQVANETHGHVGADLAALCSEAALQAIRKKMDLI 430
Score = 115 (45.5 bits), Expect = 3.1e-24, Sum P(2) = 3.1e-24
Identities = 21/35 (60%), Positives = 27/35 (77%)
Query: 170 VIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQK 204
+I ATNR D +DPA+LRPGRLD+ I PLPD + +
Sbjct: 619 IIGATNRPDIIDPAILRPGRLDQLIYIPLPDEKSR 653
>MGI|MGI:99919 [details] [associations]
symbol:Vcp "valosin containing protein" species:10090 "Mus
musculus" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0000502 "proteasome complex" evidence=ISO] [GO:0005102
"receptor binding" evidence=ISO] [GO:0005515 "protein binding"
evidence=IPI] [GO:0005524 "ATP binding" evidence=ISO] [GO:0005634
"nucleus" evidence=ISO] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0005783 "endoplasmic reticulum" evidence=ISO] [GO:0005829
"cytosol" evidence=ISO] [GO:0006200 "ATP catabolic process"
evidence=ISO] [GO:0006281 "DNA repair" evidence=IEA] [GO:0006302
"double-strand break repair" evidence=ISO] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=IGI]
[GO:0006810 "transport" evidence=IEA] [GO:0006888 "ER to Golgi
vesicle-mediated transport" evidence=ISO] [GO:0006919 "activation
of cysteine-type endopeptidase activity involved in apoptotic
process" evidence=IDA] [GO:0006974 "response to DNA damage
stimulus" evidence=ISO] [GO:0008289 "lipid binding" evidence=IEA]
[GO:0016567 "protein ubiquitination" evidence=ISO] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0016887 "ATPase activity"
evidence=ISO] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0018279 "protein N-linked glycosylation via
asparagine" evidence=ISO] [GO:0019903 "protein phosphatase binding"
evidence=ISO] [GO:0019904 "protein domain specific binding"
evidence=ISO] [GO:0019985 "translesion synthesis" evidence=ISO]
[GO:0030433 "ER-associated protein catabolic process" evidence=ISO]
[GO:0030970 "retrograde protein transport, ER to cytosol"
evidence=ISO] [GO:0031334 "positive regulation of protein complex
assembly" evidence=ISO] [GO:0031593 "polyubiquitin binding"
evidence=ISO;IDA] [GO:0032403 "protein complex binding"
evidence=ISO] [GO:0032436 "positive regulation of proteasomal
ubiquitin-dependent protein catabolic process" evidence=ISO]
[GO:0035861 "site of double-strand break" evidence=ISO] [GO:0042802
"identical protein binding" evidence=ISO] [GO:0043231
"intracellular membrane-bounded organelle" evidence=ISO]
[GO:0043234 "protein complex" evidence=IPI] [GO:0043531 "ADP
binding" evidence=ISO] [GO:0045732 "positive regulation of protein
catabolic process" evidence=ISO] [GO:0051260 "protein
homooligomerization" evidence=ISO] [GO:0070842 "aggresome assembly"
evidence=IGI] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 InterPro:IPR003338 MGI:MGI:99919 Pfam:PF02359
GO:GO:0005783 GO:GO:0005829 GO:GO:0005524 GO:GO:0005634
GO:GO:0043234 GO:GO:0031334 GO:GO:0051260 GO:GO:0016887
GO:GO:0016567 GO:GO:0008289 GO:GO:0006919 GO:GO:0030433
GO:GO:0006302 GO:GO:0000502 eggNOG:COG0464 GO:GO:0018279
GO:GO:0031593 GO:GO:0006888 Gene3D:2.40.40.20 InterPro:IPR009010
SUPFAM:SSF50692 GO:GO:0032436 InterPro:IPR015415 Pfam:PF09336
KO:K13525 InterPro:IPR004201 PANTHER:PTHR23077:SF18 Pfam:PF02933
SMART:SM01072 SMART:SM01073 TIGRFAMs:TIGR01243 OMA:AYRPIHK
GO:GO:0030970 GeneTree:ENSGT00700000104534 EMBL:AL672276
GO:GO:0070842 GO:GO:0035861 GO:GO:0019985 PDB:2PJH PDBsum:2PJH
PDB:1S3S PDBsum:1S3S HOVERGEN:HBG001226 CTD:7415 OrthoDB:EOG45TCMK
ChiTaRS:VCP EMBL:Z14044 EMBL:AK028264 EMBL:AK030751 EMBL:AK149931
EMBL:AK151109 EMBL:AK151418 EMBL:AK153249 EMBL:AK159177
EMBL:AK159509 EMBL:AK167794 EMBL:AK169140 EMBL:BC043053
EMBL:BC049114 IPI:IPI00622235 PIR:S25197 RefSeq:NP_033529.3
UniGene:Mm.245976 PDB:1E32 PDB:1R7R PDB:3CF0 PDB:3CF1 PDB:3CF2
PDB:3CF3 PDBsum:1E32 PDBsum:1R7R PDBsum:3CF0 PDBsum:3CF1
PDBsum:3CF2 PDBsum:3CF3 DisProt:DP00435 ProteinModelPortal:Q01853
SMR:Q01853 DIP:DIP-29796N IntAct:Q01853 MINT:MINT-220770
STRING:Q01853 PhosphoSite:Q01853 REPRODUCTION-2DPAGE:Q01853
UCD-2DPAGE:Q01853 PaxDb:Q01853 PRIDE:Q01853
Ensembl:ENSMUST00000030164 GeneID:269523 KEGG:mmu:269523
UCSC:uc008sor.2 InParanoid:Q01853 BindingDB:Q01853
EvolutionaryTrace:Q01853 NextBio:392876 Bgee:Q01853 CleanEx:MM_VCP
Genevestigator:Q01853 GermOnline:ENSMUSG00000028452 Uniprot:Q01853
Length = 806
Score = 245 (91.3 bits), Expect = 1.9e-18, P = 1.9e-18
Identities = 61/209 (29%), Positives = 99/209 (47%)
Query: 2 LLCTSFDTELVTAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENSPXXXXXXXXXXXXTK 61
LL + E FI + G E + + GE VR++F A++ +P
Sbjct: 526 LLAKAIANECQANFISIKGPELLTMWFGESEANVREIFDKARQAAPCVLFFDELDSIAKA 585
Query: 62 RFDAQTGADREVQRILLELLNQMDGFDQTTNVKVIMATNRADTLDPALLRPGRLDRKIEF 121
R R++ ++L +MDG NV +I ATNR D +DPA+LRPGRLD+ I
Sbjct: 586 RGGNIGDGGGAADRVINQILTEMDGMSTKKNVFIIGATNRPDIIDPAILRPGRLDQLIYI 645
Query: 122 PLPDRRQKRLVFSTITAKMNLSDEVDLEDYVARPDRISGADINAICQEVIMATNRADTLD 181
PLPD + + + K ++ +VDLE + SGAD+ ICQ R ++++
Sbjct: 646 PLPDEKSRVAILKANLRKSPVAKDVDLEFLAKMTNGFSGADLTEICQRACKLAIR-ESIE 704
Query: 182 PALLR-------PGRLDRKIEFPLPDRRQ 203
+ R P ++ + + P+P+ R+
Sbjct: 705 SEIRRERERQTNPSAMEVEEDDPVPEIRR 733
Score = 229 (85.7 bits), Expect = 2.7e-32, Sum P(2) = 2.7e-32
Identities = 59/182 (32%), Positives = 89/182 (48%)
Query: 2 LLCTSFDTELVTAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENSPXXXXXXXXXXXXTK 61
L+ + E F + G E + K GE +R F A++N+P K
Sbjct: 253 LIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEAEKNAPAIIFIDELDAIAPK 312
Query: 62 RFDAQTGADREVQRILLELLNQMDGFDQTTNVKVIMATNRADTLDPALLRPGRLDRKIEF 121
R +T + E +RI+ +LL MDG Q +V V+ ATNR +++DPAL R GR DR+++
Sbjct: 313 R--EKTHGEVE-RRIVSQLLTLMDGLKQRAHVIVMAATNRPNSIDPALRRFGRFDREVDI 369
Query: 122 PLPDRRQKRLVFSTITAKMNLSDEVDLEDYVARPDRISGADINAICQEVIMATNRA--DT 179
+PD + + T M L+D+VDLE GAD+ A+C E + R D
Sbjct: 370 GIPDATGRLEILQIHTKNMKLADDVDLEQVANETHGHVGADLAALCSEAALQAIRKKMDL 429
Query: 180 LD 181
+D
Sbjct: 430 ID 431
Score = 192 (72.6 bits), Expect = 2.7e-32, Sum P(2) = 2.7e-32
Identities = 42/103 (40%), Positives = 60/103 (58%)
Query: 207 VFSTITAKMNFMLNIGNLQVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLVFST 266
V + I +M+ M N+ +I ATNR D +DPA+LRPGRLD+ I PLPD + + +
Sbjct: 600 VINQILTEMDGMSTKKNVFIIGATNRPDIIDPAILRPGRLDQLIYIPLPDEKSRVAILKA 659
Query: 267 ITAKMNLSDEVDLEDYVARPDRISGADINAICQEAGMHAVREN 309
K ++ +VDLE + SGAD+ ICQ A A+RE+
Sbjct: 660 NLRKSPVAKDVDLEFLAKMTNGFSGADLTEICQRACKLAIRES 702
Score = 173 (66.0 bits), Expect = 6.8e-10, P = 6.8e-10
Identities = 37/111 (33%), Positives = 64/111 (57%)
Query: 203 QKRLVFSTITAKMNFMLNIGNLQVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRL 262
++R+V +T M+ + ++ V+ ATNR +++DPAL R GR DR+++ +PD +
Sbjct: 321 ERRIVSQLLTL-MDGLKQRAHVIVMAATNRPNSIDPALRRFGRFDREVDIGIPDATGRLE 379
Query: 263 VFSTITAKMNLSDEVDLEDYVARPDRISGADINAICQEAGMHAVRENRYIV 313
+ T M L+D+VDLE GAD+ A+C EA + A+R+ ++
Sbjct: 380 ILQIHTKNMKLADDVDLEQVANETHGHVGADLAALCSEAALQAIRKKMDLI 430
Score = 115 (45.5 bits), Expect = 3.1e-24, Sum P(2) = 3.1e-24
Identities = 21/35 (60%), Positives = 27/35 (77%)
Query: 170 VIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQK 204
+I ATNR D +DPA+LRPGRLD+ I PLPD + +
Sbjct: 619 IIGATNRPDIIDPAILRPGRLDQLIYIPLPDEKSR 653
>RGD|621595 [details] [associations]
symbol:Vcp "valosin-containing protein" species:10116 "Rattus
norvegicus" [GO:0000502 "proteasome complex" evidence=IEA;ISO]
[GO:0005102 "receptor binding" evidence=IDA] [GO:0005515 "protein
binding" evidence=IPI] [GO:0005524 "ATP binding" evidence=IDA;IMP]
[GO:0005634 "nucleus" evidence=IEA;ISO] [GO:0005737 "cytoplasm"
evidence=ISO] [GO:0005783 "endoplasmic reticulum" evidence=ISO;IDA]
[GO:0005829 "cytosol" evidence=ISO;IDA] [GO:0006200 "ATP catabolic
process" evidence=IDA] [GO:0006302 "double-strand break repair"
evidence=ISO;ISS] [GO:0006511 "ubiquitin-dependent protein
catabolic process" evidence=ISO] [GO:0006888 "ER to Golgi
vesicle-mediated transport" evidence=IMP] [GO:0006919 "activation
of cysteine-type endopeptidase activity involved in apoptotic
process" evidence=IEA;ISO] [GO:0006974 "response to DNA damage
stimulus" evidence=ISO;ISS] [GO:0008289 "lipid binding"
evidence=IEA] [GO:0016567 "protein ubiquitination"
evidence=ISO;ISS] [GO:0016887 "ATPase activity" evidence=IDA]
[GO:0018279 "protein N-linked glycosylation via asparagine"
evidence=ISO;ISS] [GO:0019903 "protein phosphatase binding"
evidence=IEA;ISO] [GO:0019904 "protein domain specific binding"
evidence=IEA;ISO] [GO:0019985 "translesion synthesis"
evidence=ISO;ISS] [GO:0030433 "ER-associated protein catabolic
process" evidence=ISO;ISS] [GO:0030970 "retrograde protein
transport, ER to cytosol" evidence=IEA;ISO] [GO:0031334 "positive
regulation of protein complex assembly" evidence=IEA;ISO]
[GO:0031593 "polyubiquitin binding" evidence=IEA;ISO] [GO:0032403
"protein complex binding" evidence=IPI] [GO:0032436 "positive
regulation of proteasomal ubiquitin-dependent protein catabolic
process" evidence=ISO;IMP] [GO:0035861 "site of double-strand
break" evidence=ISO;ISS] [GO:0042802 "identical protein binding"
evidence=IDA] [GO:0043231 "intracellular membrane-bounded
organelle" evidence=IDA] [GO:0043234 "protein complex"
evidence=ISO] [GO:0043531 "ADP binding" evidence=IMP] [GO:0045732
"positive regulation of protein catabolic process" evidence=ISO]
[GO:0051260 "protein homooligomerization" evidence=IDA] [GO:0070842
"aggresome assembly" evidence=IEA;ISO] [GO:0005730 "nucleolus"
evidence=ISO] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 InterPro:IPR003338 RGD:621595 Pfam:PF02359
GO:GO:0005783 GO:GO:0005829 GO:GO:0005524 GO:GO:0005634
GO:GO:0031334 GO:GO:0051260 GO:GO:0005102 GO:GO:0016887
GO:GO:0016567 GO:GO:0042802 GO:GO:0008289 GO:GO:0006919
GO:GO:0030433 GO:GO:0006302 GO:GO:0000502 eggNOG:COG0464
GO:GO:0018279 GO:GO:0006888 Gene3D:2.40.40.20 InterPro:IPR009010
SUPFAM:SSF50692 GO:GO:0032436 InterPro:IPR015415 Pfam:PF09336
HOGENOM:HOG000223224 KO:K13525 InterPro:IPR004201
PANTHER:PTHR23077:SF18 Pfam:PF02933 SMART:SM01072 SMART:SM01073
TIGRFAMs:TIGR01243 GO:GO:0030970 GeneTree:ENSGT00700000104534
GO:GO:0070842 GO:GO:0035861 GO:GO:0019985 HOVERGEN:HBG001226
CTD:7415 OrthoDB:EOG45TCMK EMBL:U11760 EMBL:BC060518
IPI:IPI00212014 PIR:A55190 RefSeq:NP_446316.1 UniGene:Rn.98891
ProteinModelPortal:P46462 SMR:P46462 IntAct:P46462
MINT:MINT-1954391 STRING:P46462 PhosphoSite:P46462
World-2DPAGE:0004:P46462 PRIDE:P46462 Ensembl:ENSRNOT00000046102
GeneID:116643 KEGG:rno:116643 UCSC:RGD:621595 InParanoid:P46462
NextBio:619375 Genevestigator:P46462 GermOnline:ENSRNOG00000034242
Uniprot:P46462
Length = 806
Score = 245 (91.3 bits), Expect = 1.9e-18, P = 1.9e-18
Identities = 61/209 (29%), Positives = 99/209 (47%)
Query: 2 LLCTSFDTELVTAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENSPXXXXXXXXXXXXTK 61
LL + E FI + G E + + GE VR++F A++ +P
Sbjct: 526 LLAKAIANECQANFISIKGPELLTMWFGESEANVREIFDKARQAAPCVLFFDELDSIAKA 585
Query: 62 RFDAQTGADREVQRILLELLNQMDGFDQTTNVKVIMATNRADTLDPALLRPGRLDRKIEF 121
R R++ ++L +MDG NV +I ATNR D +DPA+LRPGRLD+ I
Sbjct: 586 RGGNIGDGGGAADRVINQILTEMDGMSTKKNVFIIGATNRPDIIDPAILRPGRLDQLIYI 645
Query: 122 PLPDRRQKRLVFSTITAKMNLSDEVDLEDYVARPDRISGADINAICQEVIMATNRADTLD 181
PLPD + + + K ++ +VDLE + SGAD+ ICQ R ++++
Sbjct: 646 PLPDEKSRVAILKANLRKSPVAKDVDLEFLAKMTNGFSGADLTEICQRACKLAIR-ESIE 704
Query: 182 PALLR-------PGRLDRKIEFPLPDRRQ 203
+ R P ++ + + P+P+ R+
Sbjct: 705 SEIRRERERQTNPSAMEVEEDDPVPEIRR 733
Score = 229 (85.7 bits), Expect = 2.7e-32, Sum P(2) = 2.7e-32
Identities = 59/182 (32%), Positives = 89/182 (48%)
Query: 2 LLCTSFDTELVTAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENSPXXXXXXXXXXXXTK 61
L+ + E F + G E + K GE +R F A++N+P K
Sbjct: 253 LIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEAEKNAPAIIFIDELDAIAPK 312
Query: 62 RFDAQTGADREVQRILLELLNQMDGFDQTTNVKVIMATNRADTLDPALLRPGRLDRKIEF 121
R +T + E +RI+ +LL MDG Q +V V+ ATNR +++DPAL R GR DR+++
Sbjct: 313 R--EKTHGEVE-RRIVSQLLTLMDGLKQRAHVIVMAATNRPNSIDPALRRFGRFDREVDI 369
Query: 122 PLPDRRQKRLVFSTITAKMNLSDEVDLEDYVARPDRISGADINAICQEVIMATNRA--DT 179
+PD + + T M L+D+VDLE GAD+ A+C E + R D
Sbjct: 370 GIPDATGRLEILQIHTKNMKLADDVDLEQVANETHGHVGADLAALCSEAALQAIRKKMDL 429
Query: 180 LD 181
+D
Sbjct: 430 ID 431
Score = 192 (72.6 bits), Expect = 2.7e-32, Sum P(2) = 2.7e-32
Identities = 42/103 (40%), Positives = 60/103 (58%)
Query: 207 VFSTITAKMNFMLNIGNLQVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLVFST 266
V + I +M+ M N+ +I ATNR D +DPA+LRPGRLD+ I PLPD + + +
Sbjct: 600 VINQILTEMDGMSTKKNVFIIGATNRPDIIDPAILRPGRLDQLIYIPLPDEKSRVAILKA 659
Query: 267 ITAKMNLSDEVDLEDYVARPDRISGADINAICQEAGMHAVREN 309
K ++ +VDLE + SGAD+ ICQ A A+RE+
Sbjct: 660 NLRKSPVAKDVDLEFLAKMTNGFSGADLTEICQRACKLAIRES 702
Score = 173 (66.0 bits), Expect = 6.8e-10, P = 6.8e-10
Identities = 37/111 (33%), Positives = 64/111 (57%)
Query: 203 QKRLVFSTITAKMNFMLNIGNLQVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRL 262
++R+V +T M+ + ++ V+ ATNR +++DPAL R GR DR+++ +PD +
Sbjct: 321 ERRIVSQLLTL-MDGLKQRAHVIVMAATNRPNSIDPALRRFGRFDREVDIGIPDATGRLE 379
Query: 263 VFSTITAKMNLSDEVDLEDYVARPDRISGADINAICQEAGMHAVRENRYIV 313
+ T M L+D+VDLE GAD+ A+C EA + A+R+ ++
Sbjct: 380 ILQIHTKNMKLADDVDLEQVANETHGHVGADLAALCSEAALQAIRKKMDLI 430
Score = 115 (45.5 bits), Expect = 3.1e-24, Sum P(2) = 3.1e-24
Identities = 21/35 (60%), Positives = 27/35 (77%)
Query: 170 VIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQK 204
+I ATNR D +DPA+LRPGRLD+ I PLPD + +
Sbjct: 619 IIGATNRPDIIDPAILRPGRLDQLIYIPLPDEKSR 653
>UNIPROTKB|E2RLQ9 [details] [associations]
symbol:VCP "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0070842 "aggresome assembly" evidence=IEA]
[GO:0045732 "positive regulation of protein catabolic process"
evidence=IEA] [GO:0035861 "site of double-strand break"
evidence=IEA] [GO:0031593 "polyubiquitin binding" evidence=IEA]
[GO:0031334 "positive regulation of protein complex assembly"
evidence=IEA] [GO:0030970 "retrograde protein transport, ER to
cytosol" evidence=IEA] [GO:0019904 "protein domain specific
binding" evidence=IEA] [GO:0019903 "protein phosphatase binding"
evidence=IEA] [GO:0018279 "protein N-linked glycosylation via
asparagine" evidence=IEA] [GO:0006919 "activation of cysteine-type
endopeptidase activity involved in apoptotic process" evidence=IEA]
[GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=IEA] [GO:0006302 "double-strand break repair"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0000502 "proteasome complex"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
InterPro:IPR003338 Pfam:PF02359 GO:GO:0005524 GO:GO:0005634
GO:GO:0005737 GO:GO:0031334 GO:GO:0006919 GO:GO:0006302
GO:GO:0000502 GO:GO:0006511 GO:GO:0017111 Gene3D:2.40.40.20
InterPro:IPR009010 SUPFAM:SSF50692 InterPro:IPR015415 Pfam:PF09336
GO:GO:0045732 InterPro:IPR004201 PANTHER:PTHR23077:SF18
Pfam:PF02933 SMART:SM01072 SMART:SM01073 TIGRFAMs:TIGR01243
OMA:AYRPIHK GO:GO:0030970 GeneTree:ENSGT00700000104534
GO:GO:0070842 EMBL:AAEX03007949 Ensembl:ENSCAFT00000003151
NextBio:20856352 Uniprot:E2RLQ9
Length = 822
Score = 245 (91.3 bits), Expect = 2.0e-18, P = 2.0e-18
Identities = 61/209 (29%), Positives = 99/209 (47%)
Query: 2 LLCTSFDTELVTAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENSPXXXXXXXXXXXXTK 61
LL + E FI + G E + + GE VR++F A++ +P
Sbjct: 542 LLAKAIANECQANFISIKGPELLTMWFGESEANVREIFDKARQAAPCVLFFDELDSIAKA 601
Query: 62 RFDAQTGADREVQRILLELLNQMDGFDQTTNVKVIMATNRADTLDPALLRPGRLDRKIEF 121
R R++ ++L +MDG NV +I ATNR D +DPA+LRPGRLD+ I
Sbjct: 602 RGGNIGDGGGAADRVINQILTEMDGMSTKKNVFIIGATNRPDIIDPAILRPGRLDQLIYI 661
Query: 122 PLPDRRQKRLVFSTITAKMNLSDEVDLEDYVARPDRISGADINAICQEVIMATNRADTLD 181
PLPD + + + K ++ +VDLE + SGAD+ ICQ R ++++
Sbjct: 662 PLPDEKSRVAILKANLRKSPVAKDVDLEFLAKMTNGFSGADLTEICQRACKLAIR-ESIE 720
Query: 182 PALLR-------PGRLDRKIEFPLPDRRQ 203
+ R P ++ + + P+P+ R+
Sbjct: 721 SEIRRERERQTNPSAMEVEEDDPVPEIRR 749
Score = 229 (85.7 bits), Expect = 2.9e-32, Sum P(2) = 2.9e-32
Identities = 59/182 (32%), Positives = 89/182 (48%)
Query: 2 LLCTSFDTELVTAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENSPXXXXXXXXXXXXTK 61
L+ + E F + G E + K GE +R F A++N+P K
Sbjct: 269 LIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEAEKNAPAIIFIDELDAIAPK 328
Query: 62 RFDAQTGADREVQRILLELLNQMDGFDQTTNVKVIMATNRADTLDPALLRPGRLDRKIEF 121
R +T + E +RI+ +LL MDG Q +V V+ ATNR +++DPAL R GR DR+++
Sbjct: 329 R--EKTHGEVE-RRIVSQLLTLMDGLKQRAHVIVMAATNRPNSIDPALRRFGRFDREVDI 385
Query: 122 PLPDRRQKRLVFSTITAKMNLSDEVDLEDYVARPDRISGADINAICQEVIMATNRA--DT 179
+PD + + T M L+D+VDLE GAD+ A+C E + R D
Sbjct: 386 GIPDATGRLEILQIHTKNMKLADDVDLEQVANETHGHVGADLAALCSEAALQAIRKKMDL 445
Query: 180 LD 181
+D
Sbjct: 446 ID 447
Score = 192 (72.6 bits), Expect = 2.9e-32, Sum P(2) = 2.9e-32
Identities = 42/103 (40%), Positives = 60/103 (58%)
Query: 207 VFSTITAKMNFMLNIGNLQVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLVFST 266
V + I +M+ M N+ +I ATNR D +DPA+LRPGRLD+ I PLPD + + +
Sbjct: 616 VINQILTEMDGMSTKKNVFIIGATNRPDIIDPAILRPGRLDQLIYIPLPDEKSRVAILKA 675
Query: 267 ITAKMNLSDEVDLEDYVARPDRISGADINAICQEAGMHAVREN 309
K ++ +VDLE + SGAD+ ICQ A A+RE+
Sbjct: 676 NLRKSPVAKDVDLEFLAKMTNGFSGADLTEICQRACKLAIRES 718
Score = 173 (66.0 bits), Expect = 6.9e-10, P = 6.9e-10
Identities = 37/111 (33%), Positives = 64/111 (57%)
Query: 203 QKRLVFSTITAKMNFMLNIGNLQVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRL 262
++R+V +T M+ + ++ V+ ATNR +++DPAL R GR DR+++ +PD +
Sbjct: 337 ERRIVSQLLTL-MDGLKQRAHVIVMAATNRPNSIDPALRRFGRFDREVDIGIPDATGRLE 395
Query: 263 VFSTITAKMNLSDEVDLEDYVARPDRISGADINAICQEAGMHAVRENRYIV 313
+ T M L+D+VDLE GAD+ A+C EA + A+R+ ++
Sbjct: 396 ILQIHTKNMKLADDVDLEQVANETHGHVGADLAALCSEAALQAIRKKMDLI 446
Score = 115 (45.5 bits), Expect = 3.3e-24, Sum P(2) = 3.3e-24
Identities = 21/35 (60%), Positives = 27/35 (77%)
Query: 170 VIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQK 204
+I ATNR D +DPA+LRPGRLD+ I PLPD + +
Sbjct: 635 IIGATNRPDIIDPAILRPGRLDQLIYIPLPDEKSR 669
>UNIPROTKB|P23787 [details] [associations]
symbol:vcp "Transitional endoplasmic reticulum ATPase"
species:8355 "Xenopus laevis" [GO:0000785 "chromatin" evidence=IDA]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005737 "cytoplasm"
evidence=IDA] [GO:0006200 "ATP catabolic process" evidence=IDA]
[GO:0006302 "double-strand break repair" evidence=ISS] [GO:0006974
"response to DNA damage stimulus" evidence=ISS] [GO:0016567
"protein ubiquitination" evidence=ISS] [GO:0016887 "ATPase
activity" evidence=IDA] [GO:0018279 "protein N-linked glycosylation
via asparagine" evidence=ISS] [GO:0019985 "translesion synthesis"
evidence=ISS] [GO:0030433 "ER-associated protein catabolic process"
evidence=ISS] [GO:0032403 "protein complex binding" evidence=IPI]
[GO:0034214 "protein hexamerization" evidence=IDA] [GO:0035861
"site of double-strand break" evidence=ISS] [GO:0035101 "FACT
complex" evidence=IPI] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 InterPro:IPR003338 Pfam:PF02359 GO:GO:0005829
GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0006810
GO:GO:0000785 GO:GO:0016887 GO:GO:0016567 GO:GO:0008289
GO:GO:0030433 GO:GO:0006302 GO:GO:0018279 Gene3D:2.40.40.20
InterPro:IPR009010 SUPFAM:SSF50692 InterPro:IPR015415 Pfam:PF09336
KO:K13525 InterPro:IPR004201 PANTHER:PTHR23077:SF18 Pfam:PF02933
SMART:SM01072 SMART:SM01073 TIGRFAMs:TIGR01243 GO:GO:0034214
GO:GO:0035861 GO:GO:0019985 HOVERGEN:HBG001226 CTD:7415 EMBL:X54240
EMBL:BC046949 PIR:S19738 RefSeq:NP_001095217.1 UniGene:Xl.8775
ProteinModelPortal:P23787 SMR:P23787 PRIDE:P23787 GeneID:380491
KEGG:xla:380491 Xenbase:XB-GENE-969578 Uniprot:P23787
Length = 805
Score = 240 (89.5 bits), Expect = 9.4e-18, P = 9.4e-18
Identities = 61/210 (29%), Positives = 103/210 (49%)
Query: 2 LLCTSFDTELVTAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENSPXXXXXXXXXXXXTK 61
LL + E FI + G E + + GE VR++F A++ +P
Sbjct: 526 LLAKAIANECQANFISIKGPELLTMWFGESEANVREIFDKARQAAPCVLFFDELDSIAKA 585
Query: 62 RFDAQTGADREVQRILLELLNQMDGFDQTTNVKVIMATNRADTLDPALLRPGRLDRKIEF 121
R R++ ++L +MDG NV +I ATNR D +DPA+LRPGRLD+ I
Sbjct: 586 RGGNIGDGGGAADRVINQILTEMDGMSIKKNVFIIGATNRPDIIDPAILRPGRLDQLIYI 645
Query: 122 PLPDRRQKRLVFSTITAKMNLSDEVDLEDYVAR-PDRISGADINAICQEVIMATNRADTL 180
PLPD + + + K ++ +VD+ D++A+ + SGAD+ ICQ R +++
Sbjct: 646 PLPDEKSRMAILKANLRKSPVAKDVDV-DFLAKMTNGFSGADLTEICQRACKLAIR-ESI 703
Query: 181 DPALLR-------PGRLDRKIEFPLPDRRQ 203
+ + R P ++ + + P+P+ R+
Sbjct: 704 ENEIRRERDRQTNPSAMEVEEDDPVPEIRR 733
Score = 232 (86.7 bits), Expect = 3.5e-32, Sum P(2) = 3.5e-32
Identities = 60/182 (32%), Positives = 89/182 (48%)
Query: 2 LLCTSFDTELVTAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENSPXXXXXXXXXXXXTK 61
L+ + E F + G E + K GE +R F A++N+P K
Sbjct: 253 LIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEAEKNAPAIIFIDELDAIAPK 312
Query: 62 RFDAQTGADREVQRILLELLNQMDGFDQTTNVKVIMATNRADTLDPALLRPGRLDRKIEF 121
R +T + E +RI+ +LL MDG Q +V V+ ATNR +++DPAL R GR DR+++
Sbjct: 313 R--EKTHGEVE-RRIVSQLLTLMDGLKQRAHVIVMAATNRPNSIDPALRRFGRFDREVDI 369
Query: 122 PLPDRRQKRLVFSTITAKMNLSDEVDLEDYVARPDRISGADINAICQEVIMATNRA--DT 179
+PD + + T M LSD+VDLE GAD+ A+C E + R D
Sbjct: 370 GIPDSTGRLEILQIHTKNMKLSDDVDLEQVANETHGHVGADLAALCSEAALQAIRKKMDL 429
Query: 180 LD 181
+D
Sbjct: 430 ID 431
Score = 187 (70.9 bits), Expect = 3.5e-32, Sum P(2) = 3.5e-32
Identities = 42/104 (40%), Positives = 64/104 (61%)
Query: 207 VFSTITAKMNFMLNIGNLQVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLVFST 266
V + I +M+ M N+ +I ATNR D +DPA+LRPGRLD+ I PLPD + + +
Sbjct: 600 VINQILTEMDGMSIKKNVFIIGATNRPDIIDPAILRPGRLDQLIYIPLPDEKSRMAILKA 659
Query: 267 ITAKMNLSDEVDLEDYVAR-PDRISGADINAICQEAGMHAVREN 309
K ++ +VD+ D++A+ + SGAD+ ICQ A A+RE+
Sbjct: 660 NLRKSPVAKDVDV-DFLAKMTNGFSGADLTEICQRACKLAIRES 702
Score = 176 (67.0 bits), Expect = 3.1e-10, P = 3.1e-10
Identities = 38/111 (34%), Positives = 64/111 (57%)
Query: 203 QKRLVFSTITAKMNFMLNIGNLQVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRL 262
++R+V +T M+ + ++ V+ ATNR +++DPAL R GR DR+++ +PD +
Sbjct: 321 ERRIVSQLLTL-MDGLKQRAHVIVMAATNRPNSIDPALRRFGRFDREVDIGIPDSTGRLE 379
Query: 263 VFSTITAKMNLSDEVDLEDYVARPDRISGADINAICQEAGMHAVRENRYIV 313
+ T M LSD+VDLE GAD+ A+C EA + A+R+ ++
Sbjct: 380 ILQIHTKNMKLSDDVDLEQVANETHGHVGADLAALCSEAALQAIRKKMDLI 430
Score = 116 (45.9 bits), Expect = 9.5e-25, Sum P(2) = 9.5e-25
Identities = 21/38 (55%), Positives = 28/38 (73%)
Query: 170 VIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLV 207
+I ATNR D +DPA+LRPGRLD+ I PLPD + + +
Sbjct: 619 IIGATNRPDIIDPAILRPGRLDQLIYIPLPDEKSRMAI 656
>UNIPROTKB|G4N517 [details] [associations]
symbol:MGG_05193 "Cell division control protein 48"
species:242507 "Magnaporthe oryzae 70-15" [GO:0005575
"cellular_component" evidence=ND] [GO:0043581 "mycelium
development" evidence=IEP] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 InterPro:IPR003338 Pfam:PF02359 GO:GO:0005524
GO:GO:0051301 EMBL:CM001233 GO:GO:0017111 Gene3D:2.40.40.20
InterPro:IPR009010 SUPFAM:SSF50692 InterPro:IPR015415 Pfam:PF09336
GO:GO:0043581 KO:K13525 InterPro:IPR004201 PANTHER:PTHR23077:SF18
Pfam:PF02933 SMART:SM01072 SMART:SM01073 TIGRFAMs:TIGR01243
RefSeq:XP_003712735.1 ProteinModelPortal:G4N517 SMR:G4N517
EnsemblFungi:MGG_05193T0 GeneID:2675720 KEGG:mgr:MGG_05193
Uniprot:G4N517
Length = 820
Score = 246 (91.7 bits), Expect = 1.5e-18, P = 1.5e-18
Identities = 70/208 (33%), Positives = 97/208 (46%)
Query: 2 LLCTSFDTELVTAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENSPXXXXXXXXXXXXTK 61
+L + E FI V G E + + GE +RD+F A+ +P
Sbjct: 545 MLAKAVANECAANFISVKGPELLSMWFGESESNIRDIFDKARAAAPCIVFLDELDSIAKA 604
Query: 62 RFDAQTGADREVQRILLELLNQMDGFDQTTNVKVIMATNRADTLDPALLRPGRLDRKIEF 121
R + A R++ +LL +MDG NV VI ATNR + LDPAL RPGRLD I
Sbjct: 605 RGGSVGDAGGASDRVVNQLLTEMDGMTSKKNVFVIGATNRPEQLDPALCRPGRLDSLIYV 664
Query: 122 PLPDRRQKRLVFSTITAKMNLSDEVDLEDYVARPDR-ISGADINAICQEVI-MATNRADT 179
PLPD + + K +SD+VDL+ Y+A SGAD+ I Q + +A + T
Sbjct: 665 PLPDELGRLSILKAQLRKTPVSDDVDLQ-YIANKTHGFSGADLGFITQRAVKIAIKESIT 723
Query: 180 LD----PALLRPGR---LDRKIEFPLPD 200
D AL G +D E P+P+
Sbjct: 724 ADINRTKALEAAGEDVPMDEDAEDPVPE 751
Score = 241 (89.9 bits), Expect = 5.2e-32, Sum P(2) = 5.2e-32
Identities = 61/193 (31%), Positives = 94/193 (48%)
Query: 2 LLCTSFDTELVTAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENSPXXXXXXXXXXXXTK 61
L+ + E F + G E + K GE +R F A++NSP K
Sbjct: 271 LMARAVANETGAFFFLINGPEIMSKMAGESESNLRKAFEEAEKNSPAIIFIDEIDSIAPK 330
Query: 62 RFDAQTGADREVQRILLELLNQMDGFDQTTNVKVIMATNRADTLDPALLRPGRLDRKIEF 121
R +T + E +R++ +LL MDG +NV V+ ATNR +++DPAL R GR DR+++
Sbjct: 331 R--EKTNGEVE-RRVVSQLLTLMDGMKARSNVVVMAATNRPNSIDPALRRFGRFDREVDI 387
Query: 122 PLPDRRQKRLVFSTITAKMNLSDEVDLEDYVARPDRISGADINAICQEVIMATNRADTLD 181
+PD + + T M L D+VDLE A G+D+ A+C E M R + +D
Sbjct: 388 GIPDPTGRLEILQIHTKNMKLGDDVDLEQIAAETHGYVGSDVAALCSEAAMQQIR-EKMD 446
Query: 182 PALLRPGRLDRKI 194
L +D ++
Sbjct: 447 LIDLDEDTIDAEV 459
Score = 187 (70.9 bits), Expect = 1.8e-11, P = 1.8e-11
Identities = 42/115 (36%), Positives = 64/115 (55%)
Query: 204 KRLVFSTITAKMNFMLNIGNLQVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLV 263
+R V S + M+ M N+ V+ ATNR +++DPAL R GR DR+++ +PD + +
Sbjct: 339 ERRVVSQLLTLMDGMKARSNVVVMAATNRPNSIDPALRRFGRFDREVDIGIPDPTGRLEI 398
Query: 264 FSTITAKMNLSDEVDLEDYVARPDRISGADINAICQEAGMHAVRENRYIV-LPKD 317
T M L D+VDLE A G+D+ A+C EA M +RE ++ L +D
Sbjct: 399 LQIHTKNMKLGDDVDLEQIAAETHGYVGSDVAALCSEAAMQQIREKMDLIDLDED 453
Score = 173 (66.0 bits), Expect = 5.2e-32, Sum P(2) = 5.2e-32
Identities = 43/104 (41%), Positives = 60/104 (57%)
Query: 207 VFSTITAKMNFMLNIGNLQVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLVFST 266
V + + +M+ M + N+ VI ATNR + LDPAL RPGRLD I PLPD + +
Sbjct: 619 VVNQLLTEMDGMTSKKNVFVIGATNRPEQLDPALCRPGRLDSLIYVPLPDELGRLSILKA 678
Query: 267 ITAKMNLSDEVDLEDYVARPDR-ISGADINAICQEAGMHAVREN 309
K +SD+VDL+ Y+A SGAD+ I Q A A++E+
Sbjct: 679 QLRKTPVSDDVDLQ-YIANKTHGFSGADLGFITQRAVKIAIKES 721
>UNIPROTKB|H9KYT1 [details] [associations]
symbol:LOC430766 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0017111 InterPro:IPR015415 Pfam:PF09336
PANTHER:PTHR23077:SF18 GeneTree:ENSGT00700000104534
EMBL:AADN02071262 Ensembl:ENSGALT00000000527 OMA:NRRTHAK
Uniprot:H9KYT1
Length = 538
Score = 244 (91.0 bits), Expect = 1.2e-18, P = 1.2e-18
Identities = 62/210 (29%), Positives = 103/210 (49%)
Query: 2 LLCTSFDTELVTAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENSPXXXXXXXXXXXXTK 61
LL + E FI + G E + + GE VR++F A++ +P
Sbjct: 258 LLAKAIANECQANFISIKGPELLTMWFGESEANVREIFDKARQAAPCVLFFDELDSIAKA 317
Query: 62 RFDAQTGADREVQRILLELLNQMDGFDQTTNVKVIMATNRADTLDPALLRPGRLDRKIEF 121
R R++ ++L +MDG NV +I ATNR D +DPA+LRPGRLD+ I
Sbjct: 318 RGGNIGDGGGAADRVINQILTEMDGMSTKKNVFIIGATNRPDIIDPAILRPGRLDQLIYI 377
Query: 122 PLPDRRQKRLVFSTITAKMNLSDEVDLEDYVAR-PDRISGADINAICQEVIMATNRADTL 180
PLPD + + + K ++ +VDL D++A+ + SGAD+ ICQ R +++
Sbjct: 378 PLPDEKSRVAILKANLRKSPVAKDVDL-DFLAKMTNGFSGADLTEICQRACKLAIR-ESI 435
Query: 181 DPALLR-------PGRLDRKIEFPLPDRRQ 203
+ + R P ++ + + P+P+ R+
Sbjct: 436 ESEIRRERERQTNPSAMEVEEDDPVPEIRR 465
Score = 220 (82.5 bits), Expect = 1.2e-31, Sum P(2) = 1.2e-31
Identities = 56/164 (34%), Positives = 83/164 (50%)
Query: 20 GSEFVQKYLGEGPRMVRDVFRLAKENSPXXXXXXXXXXXXTKRFDAQTGADREVQRILLE 79
G E + K GE +R F A++N+P KR +T + E +RI+ +
Sbjct: 3 GPEIMSKLAGESESNLRKAFEEAEKNAPAIIFIDELDAIAPKR--EKTHGEVE-RRIVSQ 59
Query: 80 LLNQMDGFDQTTNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLVFSTITAK 139
LL MDG Q +V V+ ATNR +++DPAL R GR DR+++ +PD + + T
Sbjct: 60 LLTLMDGLKQRAHVIVMAATNRPNSIDPALRRFGRFDREVDIGIPDATGRLEILQIHTKN 119
Query: 140 MNLSDEVDLEDYVARPDRISGADINAICQEVIMATNRA--DTLD 181
M L+D+VDLE GAD+ A+C E + R D +D
Sbjct: 120 MKLADDVDLEQVGNETHGHVGADLAALCSEAALQAIRKKMDLID 163
Score = 191 (72.3 bits), Expect = 1.2e-31, Sum P(2) = 1.2e-31
Identities = 43/104 (41%), Positives = 64/104 (61%)
Query: 207 VFSTITAKMNFMLNIGNLQVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLVFST 266
V + I +M+ M N+ +I ATNR D +DPA+LRPGRLD+ I PLPD + + +
Sbjct: 332 VINQILTEMDGMSTKKNVFIIGATNRPDIIDPAILRPGRLDQLIYIPLPDEKSRVAILKA 391
Query: 267 ITAKMNLSDEVDLEDYVAR-PDRISGADINAICQEAGMHAVREN 309
K ++ +VDL D++A+ + SGAD+ ICQ A A+RE+
Sbjct: 392 NLRKSPVAKDVDL-DFLAKMTNGFSGADLTEICQRACKLAIRES 434
Score = 170 (64.9 bits), Expect = 7.8e-10, P = 7.8e-10
Identities = 37/111 (33%), Positives = 64/111 (57%)
Query: 203 QKRLVFSTITAKMNFMLNIGNLQVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRL 262
++R+V +T M+ + ++ V+ ATNR +++DPAL R GR DR+++ +PD +
Sbjct: 53 ERRIVSQLLTL-MDGLKQRAHVIVMAATNRPNSIDPALRRFGRFDREVDIGIPDATGRLE 111
Query: 263 VFSTITAKMNLSDEVDLEDYVARPDRISGADINAICQEAGMHAVRENRYIV 313
+ T M L+D+VDLE GAD+ A+C EA + A+R+ ++
Sbjct: 112 ILQIHTKNMKLADDVDLEQVGNETHGHVGADLAALCSEAALQAIRKKMDLI 162
Score = 115 (45.5 bits), Expect = 1.1e-23, Sum P(2) = 1.1e-23
Identities = 21/35 (60%), Positives = 27/35 (77%)
Query: 170 VIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQK 204
+I ATNR D +DPA+LRPGRLD+ I PLPD + +
Sbjct: 351 IIGATNRPDIIDPAILRPGRLDQLIYIPLPDEKSR 385
>TAIR|locus:2085064 [details] [associations]
symbol:CDC48 "cell division cycle 48" species:3702
"Arabidopsis thaliana" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=ISM;IDA] [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0016887 "ATPase activity" evidence=ISS]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
[GO:0042802 "identical protein binding" evidence=IPI] [GO:0022626
"cytosolic ribosome" evidence=IDA] [GO:0005618 "cell wall"
evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0046686 "response to cadmium ion" evidence=IEP;RCA] [GO:0005886
"plasma membrane" evidence=IDA] [GO:0005635 "nuclear envelope"
evidence=IDA] [GO:0005730 "nucleolus" evidence=IDA] [GO:0005819
"spindle" evidence=IDA] [GO:0009524 "phragmoplast" evidence=IDA]
[GO:0009846 "pollen germination" evidence=IMP] [GO:0009860 "pollen
tube growth" evidence=IMP] [GO:0051301 "cell division"
evidence=IMP] [GO:0005829 "cytosol" evidence=IDA] [GO:0009506
"plasmodesma" evidence=IDA] [GO:0048046 "apoplast" evidence=IDA]
[GO:0005794 "Golgi apparatus" evidence=IDA] [GO:0006486 "protein
glycosylation" evidence=RCA] [GO:0016310 "phosphorylation"
evidence=RCA] [GO:0042742 "defense response to bacterium"
evidence=RCA] [GO:0005737 "cytoplasm" evidence=IDA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
InterPro:IPR003338 Pfam:PF02359 GO:GO:0005886 GO:GO:0009506
GO:GO:0005524 GO:GO:0005794 GO:GO:0005618 GO:GO:0046686
GO:GO:0005635 EMBL:CP002686 GenomeReviews:BA000014_GR EMBL:AC015985
GO:GO:0005730 GO:GO:0051301 GO:GO:0005819 GO:GO:0048046
GO:GO:0015031 GO:GO:0007049 GO:GO:0009860 eggNOG:COG0464
GO:GO:0017111 Gene3D:2.40.40.20 InterPro:IPR009010 SUPFAM:SSF50692
GO:GO:0022626 GO:GO:0009846 GO:GO:0009524 EMBL:U37587 EMBL:AY065076
EMBL:AY094434 IPI:IPI00547533 PIR:S60112 RefSeq:NP_187595.1
UniGene:At.21739 UniGene:At.33291 ProteinModelPortal:P54609
SMR:P54609 IntAct:P54609 STRING:P54609 PaxDb:P54609 PRIDE:P54609
ProMEX:P54609 EnsemblPlants:AT3G09840.1 GeneID:820142
KEGG:ath:AT3G09840 GeneFarm:1893 TAIR:At3g09840
HOGENOM:HOG000223224 InParanoid:P54609 KO:K13525 OMA:QIANECH
PhylomeDB:P54609 ProtClustDB:CLSN2684913 Genevestigator:P54609
GermOnline:AT3G09840 InterPro:IPR004201 PANTHER:PTHR23077:SF18
Pfam:PF02933 SMART:SM01072 SMART:SM01073 TIGRFAMs:TIGR01243
Uniprot:P54609
Length = 809
Score = 246 (91.7 bits), Expect = 1.4e-18, P = 1.4e-18
Identities = 59/168 (35%), Positives = 82/168 (48%)
Query: 2 LLCTSFDTELVTAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENSPXXXXXXXXXXXXTK 61
LL + E FI V G E + + GE VR++F A++++P T+
Sbjct: 529 LLAKAIANECQANFISVKGPELLTMWFGESEANVREIFDKARQSAPCVLFFDELDSIATQ 588
Query: 62 RFDAQTG-ADREVQRILLELLNQMDGFDQTTNVKVIMATNRADTLDPALLRPGRLDRKIE 120
R G R+L +LL +MDG + V +I ATNR D +D ALLRPGRLD+ I
Sbjct: 589 RGGGSGGDGGGAADRVLNQLLTEMDGMNAKKTVFIIGATNRPDIIDSALLRPGRLDQLIY 648
Query: 121 FPLPDRRQKRLVFSTITAKMNLSDEVDLEDYVARPDRISGADINAICQ 168
PLPD + +F K ++ +VD+ SGADI ICQ
Sbjct: 649 IPLPDEDSRLNIFKAALRKSPIAKDVDIGALAKYTQGFSGADITEICQ 696
Score = 218 (81.8 bits), Expect = 3.9e-31, Sum P(2) = 3.9e-31
Identities = 61/193 (31%), Positives = 93/193 (48%)
Query: 2 LLCTSFDTELVTAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENSPXXXXXXXXXXXXTK 61
L+ + E F + G E + K GE +R F A++N+P K
Sbjct: 256 LIARAVANETGAFFFCINGPEIMSKLAGESESNLRKAFEEAEKNAPSIIFIDEIDSIAPK 315
Query: 62 RFDAQTGADREVQRILLELLNQMDGFDQTTNVKVIMATNRADTLDPALLRPGRLDRKIEF 121
R +T + E +RI+ +LL MDG +V V+ ATNR +++DPAL R GR DR+I+
Sbjct: 316 R--EKTNGEVE-RRIVSQLLTLMDGLKSRAHVIVMGATNRPNSIDPALRRFGRFDREIDI 372
Query: 122 PLPDRRQKRLVFSTITAKMNLSDEVDLEDYVARPDRISGADINAICQEVIMATNRADTLD 181
+PD + V T M L+++VDLE GAD+ A+C E + R + +D
Sbjct: 373 GVPDEIGRLEVLRIHTKNMKLAEDVDLERISKDTHGYVGADLAALCTEAALQCIR-EKMD 431
Query: 182 PALLRPGRLDRKI 194
L +D +I
Sbjct: 432 VIDLEDDSIDAEI 444
Score = 195 (73.7 bits), Expect = 3.9e-31, Sum P(2) = 3.9e-31
Identities = 47/128 (36%), Positives = 68/128 (53%)
Query: 207 VFSTITAKMNFMLNIGNLQVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLVFST 266
V + + +M+ M + +I ATNR D +D ALLRPGRLD+ I PLPD + +F
Sbjct: 604 VLNQLLTEMDGMNAKKTVFIIGATNRPDIIDSALLRPGRLDQLIYIPLPDEDSRLNIFKA 663
Query: 267 ITAKMNLSDEVDLEDYVARPDRISGADINAICQEAGMHAVRENRYIVLPKDFEKGYKKCA 326
K ++ +VD+ SGADI ICQ A +A+REN + KD EK ++
Sbjct: 664 ALRKSPIAKDVDIGALAKYTQGFSGADITEICQRACKYAIREN----IEKDIEKEKRRSE 719
Query: 327 GMHAVREN 334
A+ E+
Sbjct: 720 NPEAMEED 727
Score = 164 (62.8 bits), Expect = 6.9e-09, P = 6.9e-09
Identities = 38/111 (34%), Positives = 64/111 (57%)
Query: 203 QKRLVFSTITAKMNFMLNIGNLQVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRL 262
++R+V +T M+ + + ++ V+ ATNR +++DPAL R GR DR+I+ +PD +
Sbjct: 324 ERRIVSQLLTL-MDGLKSRAHVIVMGATNRPNSIDPALRRFGRFDREIDIGVPDEIGRLE 382
Query: 263 VFSTITAKMNLSDEVDLEDYVARPDRISGADINAICQEAGMHAVRENRYIV 313
V T M L+++VDLE GAD+ A+C EA + +RE ++
Sbjct: 383 VLRIHTKNMKLAEDVDLERISKDTHGYVGADLAALCTEAALQCIREKMDVI 433
Score = 86 (35.3 bits), Expect = 6.5e-17, Sum P(2) = 6.5e-17
Identities = 17/31 (54%), Positives = 24/31 (77%)
Query: 170 VIMATNRADTLDPALLRPGRLDRKIEFPLPD 200
V+ ATNR +++DPAL R GR DR+I+ +PD
Sbjct: 346 VMGATNRPNSIDPALRRFGRFDREIDIGVPD 376
>UNIPROTKB|F1SIH8 [details] [associations]
symbol:VCP "Transitional endoplasmic reticulum ATPase"
species:9823 "Sus scrofa" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
InterPro:IPR003338 Pfam:PF02359 GO:GO:0005524 GO:GO:0017111
Gene3D:2.40.40.20 InterPro:IPR009010 SUPFAM:SSF50692
InterPro:IPR015415 Pfam:PF09336 InterPro:IPR004201
PANTHER:PTHR23077:SF18 Pfam:PF02933 SMART:SM01072 SMART:SM01073
TIGRFAMs:TIGR01243 OMA:DIRRYEE GeneTree:ENSGT00700000104534
EMBL:FP102396 Ensembl:ENSSSCT00000005837 ArrayExpress:F1SIH8
Uniprot:F1SIH8
Length = 808
Score = 234 (87.4 bits), Expect = 5.5e-17, P = 5.5e-17
Identities = 61/211 (28%), Positives = 99/211 (46%)
Query: 2 LLCTSFDTELVTAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENSPXXXXXXXXXXXXTK 61
LL + E FI + G E + + GE VR++F A++ +P
Sbjct: 526 LLAKAIANECQANFISIKGPELLTMWFGESEANVREIFDKARQAAPCVLFFDELDSIAKA 585
Query: 62 RFDAQTGADREVQRILLELLNQMDGFDQTTNVKVIMATNRADTLDPALLRPGRLDRKIEF 121
R R++ ++L +MDG NV +I ATNR D +DPA+LRPGRLD+ I
Sbjct: 586 RGGNIGDGGGAADRVINQILTEMDGMSTKKNVFIIGATNRPDIIDPAILRPGRLDQLIYI 645
Query: 122 PLPDRRQKRLVFSTITAKMNLSD--EVDLEDYVARPDRISGADINAICQEVIMATNRADT 179
PLPD + + + K ++ +VDLE + SGAD+ ICQ R ++
Sbjct: 646 PLPDEKSRVAILKANLRKSPVAKAGDVDLEFLAKMTNGFSGADLTEICQRACKLAIR-ES 704
Query: 180 LDPALLR-------PGRLDRKIEFPLPDRRQ 203
++ + R P ++ + + P+P+ R+
Sbjct: 705 IESEIRRERERQTNPSAMEVEEDDPVPEIRR 735
Score = 229 (85.7 bits), Expect = 3.9e-31, Sum P(2) = 3.9e-31
Identities = 59/182 (32%), Positives = 89/182 (48%)
Query: 2 LLCTSFDTELVTAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENSPXXXXXXXXXXXXTK 61
L+ + E F + G E + K GE +R F A++N+P K
Sbjct: 253 LIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEAEKNAPAIIFIDELDAIAPK 312
Query: 62 RFDAQTGADREVQRILLELLNQMDGFDQTTNVKVIMATNRADTLDPALLRPGRLDRKIEF 121
R +T + E +RI+ +LL MDG Q +V V+ ATNR +++DPAL R GR DR+++
Sbjct: 313 R--EKTHGEVE-RRIVSQLLTLMDGLKQRAHVIVMAATNRPNSIDPALRRFGRFDREVDI 369
Query: 122 PLPDRRQKRLVFSTITAKMNLSDEVDLEDYVARPDRISGADINAICQEVIMATNRA--DT 179
+PD + + T M L+D+VDLE GAD+ A+C E + R D
Sbjct: 370 GIPDATGRLEILQIHTKNMKLADDVDLEQVANETHGHVGADLAALCSEAALQAIRKKMDL 429
Query: 180 LD 181
+D
Sbjct: 430 ID 431
Score = 181 (68.8 bits), Expect = 3.9e-31, Sum P(2) = 3.9e-31
Identities = 42/105 (40%), Positives = 60/105 (57%)
Query: 207 VFSTITAKMNFMLNIGNLQVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLVFST 266
V + I +M+ M N+ +I ATNR D +DPA+LRPGRLD+ I PLPD + + +
Sbjct: 600 VINQILTEMDGMSTKKNVFIIGATNRPDIIDPAILRPGRLDQLIYIPLPDEKSRVAILKA 659
Query: 267 ITAKMNLSD--EVDLEDYVARPDRISGADINAICQEAGMHAVREN 309
K ++ +VDLE + SGAD+ ICQ A A+RE+
Sbjct: 660 NLRKSPVAKAGDVDLEFLAKMTNGFSGADLTEICQRACKLAIRES 704
Score = 173 (66.0 bits), Expect = 6.8e-10, P = 6.8e-10
Identities = 37/111 (33%), Positives = 64/111 (57%)
Query: 203 QKRLVFSTITAKMNFMLNIGNLQVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRL 262
++R+V +T M+ + ++ V+ ATNR +++DPAL R GR DR+++ +PD +
Sbjct: 321 ERRIVSQLLTL-MDGLKQRAHVIVMAATNRPNSIDPALRRFGRFDREVDIGIPDATGRLE 379
Query: 263 VFSTITAKMNLSDEVDLEDYVARPDRISGADINAICQEAGMHAVRENRYIV 313
+ T M L+D+VDLE GAD+ A+C EA + A+R+ ++
Sbjct: 380 ILQIHTKNMKLADDVDLEQVANETHGHVGADLAALCSEAALQAIRKKMDLI 430
Score = 115 (45.5 bits), Expect = 3.2e-24, Sum P(2) = 3.2e-24
Identities = 21/35 (60%), Positives = 27/35 (77%)
Query: 170 VIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQK 204
+I ATNR D +DPA+LRPGRLD+ I PLPD + +
Sbjct: 619 IIGATNRPDIIDPAILRPGRLDQLIYIPLPDEKSR 653
>ZFIN|ZDB-GENE-060312-22 [details] [associations]
symbol:zgc:136908 "zgc:136908" species:7955 "Danio
rerio" [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0005575 "cellular_component" evidence=ND]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
InterPro:IPR003338 Pfam:PF02359 ZFIN:ZDB-GENE-060312-22
GO:GO:0005524 eggNOG:COG0464 GO:GO:0017111 Gene3D:2.40.40.20
InterPro:IPR009010 SUPFAM:SSF50692 HOGENOM:HOG000223224
InterPro:IPR004201 PANTHER:PTHR23077:SF18 Pfam:PF02933
SMART:SM01072 SMART:SM01073 TIGRFAMs:TIGR01243
GeneTree:ENSGT00700000104534 HOVERGEN:HBG001226 EMBL:CU571167
EMBL:BC114306 IPI:IPI00835697 RefSeq:NP_001035017.1
UniGene:Dr.47664 SMR:Q29RA2 STRING:Q29RA2
Ensembl:ENSDART00000100551 GeneID:563679 KEGG:dre:563679
InParanoid:Q29RA2 OrthoDB:EOG4WWRMB NextBio:20885016 Uniprot:Q29RA2
Length = 805
Score = 243 (90.6 bits), Expect = 3.7e-18, P = 3.7e-18
Identities = 57/168 (33%), Positives = 84/168 (50%)
Query: 2 LLCTSFDTELVTAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENSPXXXXXXXXXXXXTK 61
LL + E F+ + G E + + GE VRDVF A++ +P
Sbjct: 528 LLAKAIANECQANFVSIKGPELLTMWFGESEANVRDVFDKARQAAPCILFFDELDSIAKA 587
Query: 62 RFDAQTGADREVQRILLELLNQMDGFDQTTNVKVIMATNRADTLDPALLRPGRLDRKIEF 121
R A R++ ++L +MDG NV +I ATNR D +DPA+LRPGRLD+ I
Sbjct: 588 RGGGAGDAGGAADRVINQILTEMDGMTNKKNVFIIGATNRPDIIDPAILRPGRLDQLIYI 647
Query: 122 PLPDRRQKRLVFSTITAKMNLSDEVDLEDYVAR-PDRISGADINAICQ 168
PLPD + + K ++ +VDL Y+++ + SGAD+ ICQ
Sbjct: 648 PLPDMPSRTAILRANLRKSPVAKDVDLM-YLSKITEGFSGADLTEICQ 694
Score = 224 (83.9 bits), Expect = 4.3e-31, Sum P(2) = 4.3e-31
Identities = 60/180 (33%), Positives = 89/180 (49%)
Query: 2 LLCTSFDTELVTAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENSPXXXXXXXXXXXXTK 61
L+ + E F + G E + K GE +R F A++N+P K
Sbjct: 255 LVARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEAEKNAPAIIFIDELDAIAPK 314
Query: 62 RFDAQTGADREVQRILLELLNQMDGFDQTTNVKVIMATNRADTLDPALLRPGRLDRKIEF 121
R +T + E +RI+ +LL MDG Q +V V+ ATNR +++D AL R GR DR+I+
Sbjct: 315 R--EKTHGEVE-RRIVSQLLTLMDGLKQRAHVVVMAATNRPNSVDAALRRFGRFDREIDI 371
Query: 122 PLPDRRQKRLVFSTITAKMNLSDEVDLEDYVARPDRISGADINAICQEV-IMATNRADTL 180
+PD + + T M LS++VDLE A GAD+ A+C E + A + TL
Sbjct: 372 GIPDSTGRLEILQIHTKNMKLSEDVDLEQISAETHGHVGADLAALCSEAALQAIRKKMTL 431
Score = 187 (70.9 bits), Expect = 4.3e-31, Sum P(2) = 4.3e-31
Identities = 43/103 (41%), Positives = 62/103 (60%)
Query: 207 VFSTITAKMNFMLNIGNLQVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLVFST 266
V + I +M+ M N N+ +I ATNR D +DPA+LRPGRLD+ I PLPD + +
Sbjct: 602 VINQILTEMDGMTNKKNVFIIGATNRPDIIDPAILRPGRLDQLIYIPLPDMPSRTAILRA 661
Query: 267 ITAKMNLSDEVDLEDYVAR-PDRISGADINAICQEAGMHAVRE 308
K ++ +VDL Y+++ + SGAD+ ICQ A A+RE
Sbjct: 662 NLRKSPVAKDVDLM-YLSKITEGFSGADLTEICQRACKLAIRE 703
Score = 170 (64.9 bits), Expect = 1.5e-09, P = 1.5e-09
Identities = 38/111 (34%), Positives = 64/111 (57%)
Query: 203 QKRLVFSTITAKMNFMLNIGNLQVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRL 262
++R+V +T M+ + ++ V+ ATNR +++D AL R GR DR+I+ +PD +
Sbjct: 323 ERRIVSQLLTL-MDGLKQRAHVVVMAATNRPNSVDAALRRFGRFDREIDIGIPDSTGRLE 381
Query: 263 VFSTITAKMNLSDEVDLEDYVARPDRISGADINAICQEAGMHAVRENRYIV 313
+ T M LS++VDLE A GAD+ A+C EA + A+R+ ++
Sbjct: 382 ILQIHTKNMKLSEDVDLEQISAETHGHVGADLAALCSEAALQAIRKKMTLI 432
Score = 111 (44.1 bits), Expect = 3.9e-23, Sum P(2) = 3.9e-23
Identities = 21/31 (67%), Positives = 25/31 (80%)
Query: 170 VIMATNRADTLDPALLRPGRLDRKIEFPLPD 200
+I ATNR D +DPA+LRPGRLD+ I PLPD
Sbjct: 621 IIGATNRPDIIDPAILRPGRLDQLIYIPLPD 651
>UNIPROTKB|F1P4V8 [details] [associations]
symbol:LOC426240 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
InterPro:IPR003338 Pfam:PF02359 GO:GO:0005524 GO:GO:0017111
Gene3D:2.40.40.20 InterPro:IPR009010 SUPFAM:SSF50692
InterPro:IPR015415 Pfam:PF09336 InterPro:IPR004201
PANTHER:PTHR23077:SF18 Pfam:PF02933 SMART:SM01072 SMART:SM01073
TIGRFAMs:TIGR01243 OMA:DIRRYEE GeneTree:ENSGT00700000104534
EMBL:AADN02060646 EMBL:AADN02060647 EMBL:AADN02060648
EMBL:AADN02060649 EMBL:AADN02060650 EMBL:AADN02060651
EMBL:AADN02060652 EMBL:AADN02060653 IPI:IPI00585183
Ensembl:ENSGALT00000003093 ArrayExpress:F1P4V8 Uniprot:F1P4V8
Length = 810
Score = 244 (91.0 bits), Expect = 2.8e-18, P = 2.8e-18
Identities = 62/210 (29%), Positives = 103/210 (49%)
Query: 2 LLCTSFDTELVTAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENSPXXXXXXXXXXXXTK 61
LL + E FI + G E + + GE VR++F A++ +P
Sbjct: 530 LLAKAIANECQANFISIKGPELLTMWFGESEANVREIFDKARQAAPCVLFFDELDSIAKA 589
Query: 62 RFDAQTGADREVQRILLELLNQMDGFDQTTNVKVIMATNRADTLDPALLRPGRLDRKIEF 121
R R++ ++L +MDG NV +I ATNR D +DPA+LRPGRLD+ I
Sbjct: 590 RGGNIGDGGGAADRVINQILTEMDGMSTKKNVFIIGATNRPDIIDPAILRPGRLDQLIYI 649
Query: 122 PLPDRRQKRLVFSTITAKMNLSDEVDLEDYVAR-PDRISGADINAICQEVIMATNRADTL 180
PLPD + + + K ++ +VDL D++A+ + SGAD+ ICQ R +++
Sbjct: 650 PLPDEKSRVAILKANLRKSPVAKDVDL-DFLAKMTNGFSGADLTEICQRACKLAIR-ESI 707
Query: 181 DPALLR-------PGRLDRKIEFPLPDRRQ 203
+ + R P ++ + + P+P+ R+
Sbjct: 708 ESEIRRERERQTNPSAMEVEEDDPVPEIRR 737
Score = 218 (81.8 bits), Expect = 1.0e-30, Sum P(2) = 1.0e-30
Identities = 58/184 (31%), Positives = 89/184 (48%)
Query: 2 LLCTSFDTELVTAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENSPXXXXXXXXXXXXTK 61
L+ + E F + G E + K GE +R F ++N+P +
Sbjct: 253 LIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEETEKNAPAIIFIDELDAIASD 312
Query: 62 R-FDA-QTGADREVQRILLELLNQMDGFDQTTNVKVIMATNRADTLDPALLRPGRLDRKI 119
F + QT + E +RI+ +LL MDG Q +V V+ ATNR +++DPAL R GR DR++
Sbjct: 313 DCFPSPQTHGEVE-RRIVSQLLTLMDGLKQRAHVIVMAATNRPNSIDPALRRFGRFDREV 371
Query: 120 EFPLPDRRQKRLVFSTITAKMNLSDEVDLEDYVARPDRISGADINAICQEVIMATNRA-- 177
+ +PD + + T M L+D+VDLE GAD+ A+C E + R
Sbjct: 372 DIGIPDATGRLEILQIHTKNMKLADDVDLEQVANETHGHVGADLAALCSEAALQAIRKKM 431
Query: 178 DTLD 181
D +D
Sbjct: 432 DLID 435
Score = 191 (72.3 bits), Expect = 1.0e-30, Sum P(2) = 1.0e-30
Identities = 43/104 (41%), Positives = 64/104 (61%)
Query: 207 VFSTITAKMNFMLNIGNLQVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLVFST 266
V + I +M+ M N+ +I ATNR D +DPA+LRPGRLD+ I PLPD + + +
Sbjct: 604 VINQILTEMDGMSTKKNVFIIGATNRPDIIDPAILRPGRLDQLIYIPLPDEKSRVAILKA 663
Query: 267 ITAKMNLSDEVDLEDYVAR-PDRISGADINAICQEAGMHAVREN 309
K ++ +VDL D++A+ + SGAD+ ICQ A A+RE+
Sbjct: 664 NLRKSPVAKDVDL-DFLAKMTNGFSGADLTEICQRACKLAIRES 706
Score = 177 (67.4 bits), Expect = 2.4e-10, P = 2.4e-10
Identities = 40/121 (33%), Positives = 67/121 (55%)
Query: 196 FPLPDRR---QKRLVFSTITAKMNFMLNIGNLQVIMATNRADTLDPALLRPGRLDRKIEF 252
FP P ++R+V +T M+ + ++ V+ ATNR +++DPAL R GR DR+++
Sbjct: 315 FPSPQTHGEVERRIVSQLLTL-MDGLKQRAHVIVMAATNRPNSIDPALRRFGRFDREVDI 373
Query: 253 PLPDRRQKRLVFSTITAKMNLSDEVDLEDYVARPDRISGADINAICQEAGMHAVRENRYI 312
+PD + + T M L+D+VDLE GAD+ A+C EA + A+R+ +
Sbjct: 374 GIPDATGRLEILQIHTKNMKLADDVDLEQVANETHGHVGADLAALCSEAALQAIRKKMDL 433
Query: 313 V 313
+
Sbjct: 434 I 434
Score = 115 (45.5 bits), Expect = 9.0e-23, Sum P(2) = 9.0e-23
Identities = 21/35 (60%), Positives = 27/35 (77%)
Query: 170 VIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQK 204
+I ATNR D +DPA+LRPGRLD+ I PLPD + +
Sbjct: 623 IIGATNRPDIIDPAILRPGRLDQLIYIPLPDEKSR 657
>TAIR|locus:2831844 [details] [associations]
symbol:AtCDC48C "cell division cycle 48C" species:3702
"Arabidopsis thaliana" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=ISM] [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0016887 "ATPase activity" evidence=ISS]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
[GO:0005618 "cell wall" evidence=IDA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0005829 "cytosol" evidence=IDA] [GO:0005794
"Golgi apparatus" evidence=IDA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005938
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 InterPro:IPR003338
Pfam:PF02359 GO:GO:0005829 GO:GO:0005524 GO:GO:0005634
GO:GO:0005794 EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0005618
EMBL:AL162751 GO:GO:0051301 GO:GO:0005856 GO:GO:0015031
GO:GO:0007049 GO:GO:0017111 Gene3D:2.40.40.20 InterPro:IPR009010
SUPFAM:SSF50692 GO:GO:0009524 UniGene:At.33291 HOGENOM:HOG000223224
KO:K13525 ProtClustDB:CLSN2684913 InterPro:IPR004201
PANTHER:PTHR23077:SF18 Pfam:PF02933 SMART:SM01072 SMART:SM01073
TIGRFAMs:TIGR01243 EMBL:AK117125 EMBL:AK118571 EMBL:BT006485
IPI:IPI00543476 RefSeq:NP_568114.1 ProteinModelPortal:Q9LZF6
SMR:Q9LZF6 IntAct:Q9LZF6 STRING:Q9LZF6 PRIDE:Q9LZF6
EnsemblPlants:AT5G03340.1 GeneID:831870 KEGG:ath:AT5G03340
GeneFarm:1899 TAIR:At5g03340 InParanoid:Q9LZF6 OMA:AYRPIHK
PhylomeDB:Q9LZF6 Genevestigator:Q9LZF6 GermOnline:AT5G03340
Uniprot:Q9LZF6
Length = 810
Score = 253 (94.1 bits), Expect = 1.1e-19, P = 1.1e-19
Identities = 59/167 (35%), Positives = 84/167 (50%)
Query: 2 LLCTSFDTELVTAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENSPXXXXXXXXXXXXTK 61
LL + E FI V G E + + GE VR++F A++++P T+
Sbjct: 529 LLAKAIANECQANFISVKGPELLTMWFGESEANVREIFDKARQSAPCVLFFDELDSIATQ 588
Query: 62 RFDAQTGADREVQRILLELLNQMDGFDQTTNVKVIMATNRADTLDPALLRPGRLDRKIEF 121
R ++ A R+L +LL +MDG + V +I ATNR D +D ALLRPGRLD+ I
Sbjct: 589 RGNSAGDAGGAADRVLNQLLTEMDGMNAKKTVFIIGATNRPDIIDSALLRPGRLDQLIYI 648
Query: 122 PLPDRRQKRLVFSTITAKMNLSDEVDLEDYVARPDRISGADINAICQ 168
PLPD + +F K ++ +VD+ SGADI ICQ
Sbjct: 649 PLPDEDSRLNIFKACLRKSPVAKDVDVTALAKYTQGFSGADITEICQ 695
Score = 218 (81.8 bits), Expect = 1.6e-30, Sum P(2) = 1.6e-30
Identities = 61/193 (31%), Positives = 93/193 (48%)
Query: 2 LLCTSFDTELVTAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENSPXXXXXXXXXXXXTK 61
L+ + E F + G E + K GE +R F A++N+P K
Sbjct: 256 LIARAVANETGAFFFCINGPEIMSKLAGESESNLRKAFEEAEKNAPSIIFIDEIDSIAPK 315
Query: 62 RFDAQTGADREVQRILLELLNQMDGFDQTTNVKVIMATNRADTLDPALLRPGRLDRKIEF 121
R +T + E +RI+ +LL MDG +V V+ ATNR +++DPAL R GR DR+I+
Sbjct: 316 R--EKTNGEVE-RRIVSQLLTLMDGLKSRAHVIVMGATNRPNSIDPALRRFGRFDREIDI 372
Query: 122 PLPDRRQKRLVFSTITAKMNLSDEVDLEDYVARPDRISGADINAICQEVIMATNRADTLD 181
+PD + V T M L+++VDLE GAD+ A+C E + R + +D
Sbjct: 373 GVPDEIGRLEVLRIHTKNMKLAEDVDLERISKDTHGYVGADLAALCTEAALQCIR-EKMD 431
Query: 182 PALLRPGRLDRKI 194
L +D +I
Sbjct: 432 VIDLEDDSIDAEI 444
Score = 189 (71.6 bits), Expect = 1.6e-30, Sum P(2) = 1.6e-30
Identities = 46/128 (35%), Positives = 67/128 (52%)
Query: 207 VFSTITAKMNFMLNIGNLQVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLVFST 266
V + + +M+ M + +I ATNR D +D ALLRPGRLD+ I PLPD + +F
Sbjct: 603 VLNQLLTEMDGMNAKKTVFIIGATNRPDIIDSALLRPGRLDQLIYIPLPDEDSRLNIFKA 662
Query: 267 ITAKMNLSDEVDLEDYVARPDRISGADINAICQEAGMHAVRENRYIVLPKDFEKGYKKCA 326
K ++ +VD+ SGADI ICQ A +A+REN + KD E ++
Sbjct: 663 CLRKSPVAKDVDVTALAKYTQGFSGADITEICQRACKYAIREN----IEKDIENERRRSQ 718
Query: 327 GMHAVREN 334
A+ E+
Sbjct: 719 NPEAMEED 726
Score = 164 (62.8 bits), Expect = 6.9e-09, P = 6.9e-09
Identities = 38/111 (34%), Positives = 64/111 (57%)
Query: 203 QKRLVFSTITAKMNFMLNIGNLQVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRL 262
++R+V +T M+ + + ++ V+ ATNR +++DPAL R GR DR+I+ +PD +
Sbjct: 324 ERRIVSQLLTL-MDGLKSRAHVIVMGATNRPNSIDPALRRFGRFDREIDIGVPDEIGRLE 382
Query: 263 VFSTITAKMNLSDEVDLEDYVARPDRISGADINAICQEAGMHAVRENRYIV 313
V T M L+++VDLE GAD+ A+C EA + +RE ++
Sbjct: 383 VLRIHTKNMKLAEDVDLERISKDTHGYVGADLAALCTEAALQCIREKMDVI 433
Score = 86 (35.3 bits), Expect = 3.4e-16, Sum P(2) = 3.4e-16
Identities = 17/31 (54%), Positives = 24/31 (77%)
Query: 170 VIMATNRADTLDPALLRPGRLDRKIEFPLPD 200
V+ ATNR +++DPAL R GR DR+I+ +PD
Sbjct: 346 VMGATNRPNSIDPALRRFGRFDREIDIGVPD 376
>SGD|S000002284 [details] [associations]
symbol:CDC48 "AAA ATPase involved in multiple processes"
species:4932 "Saccharomyces cerevisiae" [GO:0005829 "cytosol"
evidence=IDA] [GO:0043332 "mating projection tip" evidence=IDA]
[GO:0016887 "ATPase activity" evidence=IDA] [GO:0005634 "nucleus"
evidence=IDA] [GO:0030433 "ER-associated protein catabolic process"
evidence=IMP] [GO:0000837 "Doa10p ubiquitin ligase complex"
evidence=IDA] [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005783 "endoplasmic reticulum"
evidence=IEA] [GO:0006810 "transport" evidence=IEA] [GO:0007049
"cell cycle" evidence=IEA] [GO:0015031 "protein transport"
evidence=IEA] [GO:0043231 "intracellular membrane-bounded
organelle" evidence=IEA] [GO:1900182 "positive regulation of
protein localization to nucleus" evidence=IMP] [GO:0051228 "mitotic
spindle disassembly" evidence=IMP] [GO:0016320 "endoplasmic
reticulum membrane fusion" evidence=IMP] [GO:0034517 "ribophagy"
evidence=IMP] [GO:0071712 "ER-associated misfolded protein
catabolic process" evidence=IMP] [GO:0030970 "retrograde protein
transport, ER to cytosol" evidence=IMP] [GO:0034098
"Cdc48p-Npl4p-Ufd1p AAA ATPase complex" evidence=IDA] [GO:0043161
"proteasomal ubiquitin-dependent protein catabolic process"
evidence=IMP] [GO:0043130 "ubiquitin binding" evidence=IDA]
[GO:0036266 "Cdc48p-Npl4p-Vms1p AAA ATPase complex" evidence=IDA]
[GO:0071630 "nucleus-associated proteasomal ubiquitin-dependent
protein catabolic process" evidence=IMP] [GO:0034727 "piecemeal
microautophagy of nucleus" evidence=IMP] [GO:0016236
"macroautophagy" evidence=IMP] [GO:0031134 "sister chromatid
biorientation" evidence=IMP] [GO:0005739 "mitochondrion"
evidence=IDA] [GO:0072671 "mitochondria-associated protein
catabolic process" evidence=IMP] [GO:0071629 "cytoplasm-associated
proteasomal ubiquitin-dependent protein catabolic process"
evidence=IMP] [GO:0005789 "endoplasmic reticulum membrane"
evidence=IDA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 InterPro:IPR003338 SGD:S000002284 Pfam:PF02359
GO:GO:0005829 GO:GO:0005524 GO:GO:0005634 GO:GO:0043332
EMBL:BK006938 GO:GO:0016887 eggNOG:COG0464 Gene3D:2.40.40.20
InterPro:IPR009010 SUPFAM:SSF50692 GO:GO:0016236 GO:GO:0031134
GO:GO:0043130 GO:GO:0034727 GO:GO:0016320 GO:GO:0034517
HOGENOM:HOG000223224 KO:K13525 InterPro:IPR004201
PANTHER:PTHR23077:SF18 Pfam:PF02933 SMART:SM01072 SMART:SM01073
TIGRFAMs:TIGR01243 OrthoDB:EOG47H8Z3 GO:GO:0034098 GO:GO:0030970
EMBL:X56956 EMBL:Z74174 PIR:S67669 RefSeq:NP_010157.1
ProteinModelPortal:P25694 SMR:P25694 DIP:DIP-2704N IntAct:P25694
MINT:MINT-547129 STRING:P25694 TCDB:3.A.16.1.2 PaxDb:P25694
PeptideAtlas:P25694 PRIDE:P25694 EnsemblFungi:YDL126C GeneID:851431
KEGG:sce:YDL126C CYGD:YDL126c GeneTree:ENSGT00700000104534
OMA:TIPRITW NextBio:968654 Genevestigator:P25694 GermOnline:YDL126C
GO:GO:0036266 GO:GO:0000837 GO:GO:0071629 GO:GO:0071712
GO:GO:0072671 GO:GO:0051228 GO:GO:0071630 GO:GO:1900182
Uniprot:P25694
Length = 835
Score = 242 (90.2 bits), Expect = 1.7e-30, Sum P(2) = 1.7e-30
Identities = 65/194 (33%), Positives = 95/194 (48%)
Query: 2 LLCTSFDTELVTAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENSPXXXXXXXXXXXXTK 61
L+ + E F + G E + K GE +R F A++N+P K
Sbjct: 263 LMARAVANETGAFFFLINGPEVMSKMAGESESNLRKAFEEAEKNAPAIIFIDEIDSIAPK 322
Query: 62 RFDAQTGADREVQR-ILLELLNQMDGFDQTTNVKVIMATNRADTLDPALLRPGRLDRKIE 120
R D G EV+R ++ +LL MDG +NV VI ATNR +++DPAL R GR DR+++
Sbjct: 323 R-DKTNG---EVERRVVSQLLTLMDGMKARSNVVVIAATNRPNSIDPALRRFGRFDREVD 378
Query: 121 FPLPDRRQKRLVFSTITAKMNLSDEVDLEDYVARPDRISGADINAICQEVIMATNRADTL 180
+PD + V T M L+D+VDLE A GADI ++C E M R + +
Sbjct: 379 IGIPDATGRLEVLRIHTKNMKLADDVDLEALAAETHGYVGADIASLCSEAAMQQIR-EKM 437
Query: 181 DPALLRPGRLDRKI 194
D L +D ++
Sbjct: 438 DLIDLDEDEIDAEV 451
Score = 228 (85.3 bits), Expect = 3.2e-16, P = 3.2e-16
Identities = 57/167 (34%), Positives = 80/167 (47%)
Query: 2 LLCTSFDTELVTAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENSPXXXXXXXXXXXXTK 61
LL + TE+ FI V G E + + GE +RD+F A+ +P
Sbjct: 536 LLAKAVATEVSANFISVKGPELLSMWYGESESNIRDIFDKARAAAPTVVFLDELDSIAKA 595
Query: 62 RFDAQTGADREVQRILLELLNQMDGFDQTTNVKVIMATNRADTLDPALLRPGRLDRKIEF 121
R + A R++ +LL +MDG + NV VI ATNR D +DPA+LRPGRLD+ I
Sbjct: 596 RGGSLGDAGGASDRVVNQLLTEMDGMNAKKNVFVIGATNRPDQIDPAILRPGRLDQLIYV 655
Query: 122 PLPDRRQKRLVFSTITAKMNLSDEVDLEDYVARPDRISGADINAICQ 168
PLPD + + + K L ++L SGAD+ I Q
Sbjct: 656 PLPDENARLSILNAQLRKTPLEPGLELTAIAKATQGFSGADLLYIVQ 702
Score = 191 (72.3 bits), Expect = 6.7e-12, P = 6.7e-12
Identities = 45/115 (39%), Positives = 65/115 (56%)
Query: 204 KRLVFSTITAKMNFMLNIGNLQVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLV 263
+R V S + M+ M N+ VI ATNR +++DPAL R GR DR+++ +PD + V
Sbjct: 331 ERRVVSQLLTLMDGMKARSNVVVIAATNRPNSIDPALRRFGRFDREVDIGIPDATGRLEV 390
Query: 264 FSTITAKMNLSDEVDLEDYVARPDRISGADINAICQEAGMHAVRENRYIV-LPKD 317
T M L+D+VDLE A GADI ++C EA M +RE ++ L +D
Sbjct: 391 LRIHTKNMKLADDVDLEALAAETHGYVGADIASLCSEAAMQQIREKMDLIDLDED 445
Score = 157 (60.3 bits), Expect = 1.7e-30, Sum P(2) = 1.7e-30
Identities = 37/103 (35%), Positives = 56/103 (54%)
Query: 207 VFSTITAKMNFMLNIGNLQVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLVFST 266
V + + +M+ M N+ VI ATNR D +DPA+LRPGRLD+ I PLPD + + +
Sbjct: 610 VVNQLLTEMDGMNAKKNVFVIGATNRPDQIDPAILRPGRLDQLIYVPLPDENARLSILNA 669
Query: 267 ITAKMNLSDEVDLEDYVARPDRISGADINAICQEAGMHAVREN 309
K L ++L SGAD+ I Q A +A++++
Sbjct: 670 QLRKTPLEPGLELTAIAKATQGFSGADLLYIVQRAAKYAIKDS 712
>POMBASE|SPAC1565.08 [details] [associations]
symbol:cdc48 "AAA family ATPase Cdc48" species:4896
"Schizosaccharomyces pombe" [GO:0000790 "nuclear chromatin"
evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0005789
"endoplasmic reticulum membrane" evidence=ISO] [GO:0005829
"cytosol" evidence=IDA] [GO:0006511 "ubiquitin-dependent protein
catabolic process" evidence=IGI] [GO:0006906 "vesicle fusion"
evidence=ISO] [GO:0016887 "ATPase activity" evidence=ISM]
[GO:0030433 "ER-associated protein catabolic process" evidence=ISO]
[GO:0030970 "retrograde protein transport, ER to cytosol"
evidence=ISS] [GO:0033047 "regulation of mitotic sister chromatid
segregation" evidence=IGI] [GO:0033554 "cellular response to
stress" evidence=IGI] [GO:0034098 "Cdc48p-Npl4p-Ufd1p AAA ATPase
complex" evidence=ISO] [GO:0051230 "spindle disassembly"
evidence=TAS] [GO:0061166 "establishment of endoplasmic reticulum
localization involved in endoplasmic reticulum polarization at cell
division site" evidence=IMP] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 InterPro:IPR003338 PomBase:SPAC1565.08 Pfam:PF02359
GO:GO:0005829 GO:GO:0005524 EMBL:CU329670 GenomeReviews:CU329670_GR
GO:GO:0033554 GO:GO:0016887 GO:GO:0000790 GO:GO:0030433
eggNOG:COG0464 Gene3D:2.40.40.20 InterPro:IPR009010 SUPFAM:SSF50692
GO:GO:0006906 GO:GO:0033047 HOGENOM:HOG000223224 KO:K13525
InterPro:IPR004201 PANTHER:PTHR23077:SF18 Pfam:PF02933
SMART:SM01072 SMART:SM01073 TIGRFAMs:TIGR01243 GO:GO:0061166
OrthoDB:EOG47H8Z3 RefSeq:NP_593287.2 ProteinModelPortal:Q9P3A7
SMR:Q9P3A7 IntAct:Q9P3A7 STRING:Q9P3A7 PRIDE:Q9P3A7
EnsemblFungi:SPAC1565.08.1 GeneID:2542744 KEGG:spo:SPAC1565.08
OMA:IVTIHPC NextBio:20803789 GO:GO:0034098 GO:GO:0030970
GO:GO:0051230 Uniprot:Q9P3A7
Length = 815
Score = 238 (88.8 bits), Expect = 3.4e-30, Sum P(2) = 3.4e-30
Identities = 60/193 (31%), Positives = 95/193 (49%)
Query: 2 LLCTSFDTELVTAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENSPXXXXXXXXXXXXTK 61
L+ + E F + G E + K GE +R F A++NSP K
Sbjct: 273 LMARAVANETGAFFFLINGPEIMSKMAGESESNLRKAFEEAEKNSPAIIFIDEIDSIAPK 332
Query: 62 RFDAQTGADREVQRILLELLNQMDGFDQTTNVKVIMATNRADTLDPALLRPGRLDRKIEF 121
R +T + E +R++ +LL MDG +NV V+ ATNR +++DPAL R GR DR+++
Sbjct: 333 R--EKTNGEVE-RRVVSQLLTLMDGMKARSNVVVMAATNRPNSIDPALRRFGRFDREVDV 389
Query: 122 PLPDRRQKRLVFSTITAKMNLSDEVDLEDYVARPDRISGADINAICQEVIMATNRADTLD 181
+PD + + T M L+D+VDLE A G+D+ ++C E M R + +D
Sbjct: 390 GIPDPTGRLEILRIHTKNMKLADDVDLEQIAAETHGYVGSDLASLCSEAAMQQIR-EKMD 448
Query: 182 PALLRPGRLDRKI 194
L +D ++
Sbjct: 449 MIDLDEDEIDAEV 461
Score = 238 (88.8 bits), Expect = 1.8e-17, P = 1.8e-17
Identities = 60/185 (32%), Positives = 88/185 (47%)
Query: 2 LLCTSFDTELVTAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENSPXXXXXXXXXXXXTK 61
LL + E FI V G E + + GE VRD+F A+ +P
Sbjct: 546 LLAKAIANECSANFISVKGPELLSMWFGESESNVRDIFDKARAAAPCVVFLDELDSIAKA 605
Query: 62 RFDAQTGADREVQRILLELLNQMDGFDQTTNVKVIMATNRADTLDPALLRPGRLDRKIEF 121
R A G R++ +LL +MDG + NV VI ATNR D +DPAL+RPGRLD+ I
Sbjct: 606 R-GASAGDSGGGDRVVNQLLTEMDGVNSKKNVFVIGATNRPDQIDPALMRPGRLDQLIYV 664
Query: 122 PLPDRRQKRLVFSTITAKMNLSDEVDLEDYVARPDRISGADINAICQEVIMATNRADTLD 181
PLPD + + T ++++VDL SGAD+ + Q + + D+++
Sbjct: 665 PLPDEEARFSILQTQLRHTPVAEDVDLRAVAKATHGFSGADLEFVVQRAVKLAIK-DSIE 723
Query: 182 PALLR 186
+ R
Sbjct: 724 EDIKR 728
Score = 181 (68.8 bits), Expect = 8.6e-11, P = 8.6e-11
Identities = 41/115 (35%), Positives = 65/115 (56%)
Query: 204 KRLVFSTITAKMNFMLNIGNLQVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLV 263
+R V S + M+ M N+ V+ ATNR +++DPAL R GR DR+++ +PD + +
Sbjct: 341 ERRVVSQLLTLMDGMKARSNVVVMAATNRPNSIDPALRRFGRFDREVDVGIPDPTGRLEI 400
Query: 264 FSTITAKMNLSDEVDLEDYVARPDRISGADINAICQEAGMHAVRENRYIV-LPKD 317
T M L+D+VDLE A G+D+ ++C EA M +RE ++ L +D
Sbjct: 401 LRIHTKNMKLADDVDLEQIAAETHGYVGSDLASLCSEAAMQQIREKMDMIDLDED 455
Score = 160 (61.4 bits), Expect = 3.4e-30, Sum P(2) = 3.4e-30
Identities = 38/115 (33%), Positives = 63/115 (54%)
Query: 207 VFSTITAKMNFMLNIGNLQVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLVFST 266
V + + +M+ + + N+ VI ATNR D +DPAL+RPGRLD+ I PLPD + + T
Sbjct: 619 VVNQLLTEMDGVNSKKNVFVIGATNRPDQIDPALMRPGRLDQLIYVPLPDEEARFSILQT 678
Query: 267 ITAKMNLSDEVDLEDYVARPDRISGADINAICQEAGMHAVRENRYIVLPKDFEKG 321
++++VDL SGAD+ + Q A A++++ + ++ E G
Sbjct: 679 QLRHTPVAEDVDLRAVAKATHGFSGADLEFVVQRAVKLAIKDSIEEDIKRENETG 733
>CGD|CAL0000732 [details] [associations]
symbol:CDC48 species:5476 "Candida albicans" [GO:0005886
"plasma membrane" evidence=IDA] [GO:0043332 "mating projection tip"
evidence=IEA] [GO:0000790 "nuclear chromatin" evidence=IEA]
[GO:0034098 "Cdc48p-Npl4p-Ufd1p AAA ATPase complex" evidence=IEA]
[GO:0005829 "cytosol" evidence=IEA] [GO:0036266 "Cdc48p-Npl4p-Vms1p
AAA ATPase complex" evidence=IEA] [GO:0000837 "Doa10p ubiquitin
ligase complex" evidence=IEA] [GO:0005739 "mitochondrion"
evidence=IEA] [GO:0030970 "retrograde protein transport, ER to
cytosol" evidence=IEA] [GO:0031134 "sister chromatid biorientation"
evidence=IEA] [GO:0033047 "regulation of mitotic sister chromatid
segregation" evidence=IEA] [GO:0071629 "cytoplasm-associated
proteasomal ubiquitin-dependent protein catabolic process"
evidence=IEA] [GO:1900182 "positive regulation of protein
localization to nucleus" evidence=IEA] [GO:0071712 "ER-associated
misfolded protein catabolic process" evidence=IEA] [GO:0071630
"nucleus-associated proteasomal ubiquitin-dependent protein
catabolic process" evidence=IEA] [GO:0051228 "mitotic spindle
disassembly" evidence=IEA] [GO:0016320 "endoplasmic reticulum
membrane fusion" evidence=IEA] [GO:0034727 "piecemeal
microautophagy of nucleus" evidence=IEA] [GO:0072671
"mitochondria-associated protein catabolic process" evidence=IEA]
[GO:0034517 "ribophagy" evidence=IEA] [GO:0061166 "establishment of
endoplasmic reticulum localization involved in endoplasmic
reticulum polarization at cell division site" evidence=IEA]
[GO:0016236 "macroautophagy" evidence=IEA] [GO:0009986 "cell
surface" evidence=IDA] [GO:0043130 "ubiquitin binding"
evidence=IEA] [GO:0016887 "ATPase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
InterPro:IPR003338 CGD:CAL0000732 Pfam:PF02359 GO:GO:0005886
GO:GO:0005524 GO:GO:0009986 eggNOG:COG0464 GO:GO:0017111
Gene3D:2.40.40.20 InterPro:IPR009010 SUPFAM:SSF50692
InterPro:IPR015415 Pfam:PF09336 EMBL:AACQ01000114 EMBL:AACQ01000113
HOGENOM:HOG000223224 KO:K13525 InterPro:IPR004201
PANTHER:PTHR23077:SF18 Pfam:PF02933 SMART:SM01072 SMART:SM01073
TIGRFAMs:TIGR01243 RefSeq:XP_713945.1 RefSeq:XP_714003.1
ProteinModelPortal:Q59WG3 SMR:Q59WG3 STRING:Q59WG3 GeneID:3644394
GeneID:3644440 KEGG:cal:CaO19.2340 KEGG:cal:CaO19.9876
Uniprot:Q59WG3
Length = 826
Score = 241 (89.9 bits), Expect = 4.1e-30, Sum P(2) = 4.1e-30
Identities = 62/181 (34%), Positives = 91/181 (50%)
Query: 15 FIRVVGSEFVQKYLGEGPRMVRDVFRLAKENSPXXXXXXXXXXXXTKRFDAQTGADREVQ 74
F + G E + K GE +R F A++NSP KR D G EV+
Sbjct: 277 FFLINGPEIMSKMAGESESNLRKAFEEAEKNSPSIIFIDEIDSIAPKR-DKTNG---EVE 332
Query: 75 R-ILLELLNQMDGFDQTTNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLVF 133
R ++ +LL MDG +NV VI ATNR +++DPAL R GR DR+++ +PD + +
Sbjct: 333 RRVVSQLLTLMDGMKARSNVVVIAATNRPNSIDPALRRFGRFDREVDIGVPDAEGRLEIL 392
Query: 134 STITAKMNLSDEVDLEDYVARPDRISGADINAICQEVIMATNRADTLDPALLRPGRLDRK 193
T M L+D+VDLE + GADI ++C E M R + +D L +D +
Sbjct: 393 RIHTKNMKLADDVDLEAIASETHGFVGADIASLCSEAAMQQIR-EKMDLIDLEEETIDTE 451
Query: 194 I 194
+
Sbjct: 452 V 452
Score = 234 (87.4 bits), Expect = 5.7e-17, P = 5.7e-17
Identities = 58/167 (34%), Positives = 80/167 (47%)
Query: 2 LLCTSFDTELVTAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENSPXXXXXXXXXXXXTK 61
LL + TE+ FI V G E + + GE +RD+F A+ +P
Sbjct: 537 LLAKAVATEVSANFISVKGPELLSMWYGESESNIRDIFDKARAAAPTVVFLDELDSIAKA 596
Query: 62 RFDAQTGADREVQRILLELLNQMDGFDQTTNVKVIMATNRADTLDPALLRPGRLDRKIEF 121
R + A R++ +LL +MDG + NV VI ATNR D +DPALLRPGRLD+ I
Sbjct: 597 RGGSHGDAGGASDRVVNQLLTEMDGMNAKKNVFVIGATNRPDQIDPALLRPGRLDQLIYV 656
Query: 122 PLPDRRQKRLVFSTITAKMNLSDEVDLEDYVARPDRISGADINAICQ 168
PLPD + + L +DL + SGAD++ I Q
Sbjct: 657 PLPDEPARLSILQAQLRNTPLEPGLDLNEIAKITHGFSGADLSYIVQ 703
Score = 187 (70.9 bits), Expect = 1.9e-11, P = 1.9e-11
Identities = 41/110 (37%), Positives = 62/110 (56%)
Query: 204 KRLVFSTITAKMNFMLNIGNLQVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLV 263
+R V S + M+ M N+ VI ATNR +++DPAL R GR DR+++ +PD + +
Sbjct: 332 ERRVVSQLLTLMDGMKARSNVVVIAATNRPNSIDPALRRFGRFDREVDIGVPDAEGRLEI 391
Query: 264 FSTITAKMNLSDEVDLEDYVARPDRISGADINAICQEAGMHAVRENRYIV 313
T M L+D+VDLE + GADI ++C EA M +RE ++
Sbjct: 392 LRIHTKNMKLADDVDLEAIASETHGFVGADIASLCSEAAMQQIREKMDLI 441
Score = 155 (59.6 bits), Expect = 4.1e-30, Sum P(2) = 4.1e-30
Identities = 37/103 (35%), Positives = 55/103 (53%)
Query: 207 VFSTITAKMNFMLNIGNLQVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLVFST 266
V + + +M+ M N+ VI ATNR D +DPALLRPGRLD+ I PLPD + +
Sbjct: 611 VVNQLLTEMDGMNAKKNVFVIGATNRPDQIDPALLRPGRLDQLIYVPLPDEPARLSILQA 670
Query: 267 ITAKMNLSDEVDLEDYVARPDRISGADINAICQEAGMHAVREN 309
L +DL + SGAD++ I Q + A++++
Sbjct: 671 QLRNTPLEPGLDLNEIAKITHGFSGADLSYIVQRSAKFAIKDS 713
Score = 117 (46.2 bits), Expect = 3.9e-26, Sum P(2) = 3.9e-26
Identities = 42/127 (33%), Positives = 65/127 (51%)
Query: 170 VIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLVFSTITAKM-NFMLNIG-NL-QV 226
VI ATNR D +DPALLRPGRLD+ I PLPD RL S + A++ N L G +L ++
Sbjct: 630 VIGATNRPDQIDPALLRPGRLDQLIYVPLPDE-PARL--SILQAQLRNTPLEPGLDLNEI 686
Query: 227 IMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLVFSTITAKMNLSDEVDLEDYVARP 286
T+ D + + + R +F + D + ++ + I + ++V ED +
Sbjct: 687 AKITHGFSGADLSYI----VQRSAKFAIKDSIEAQVKINKIKEE---KEKVKTEDVDMKV 739
Query: 287 DRISGAD 293
D + D
Sbjct: 740 DEVEEED 746
>UNIPROTKB|Q59WG3 [details] [associations]
symbol:CDC48 "Putative uncharacterized protein CDC48"
species:237561 "Candida albicans SC5314" [GO:0005886 "plasma
membrane" evidence=IDA] [GO:0009986 "cell surface" evidence=IDA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
InterPro:IPR003338 CGD:CAL0000732 Pfam:PF02359 GO:GO:0005886
GO:GO:0005524 GO:GO:0009986 eggNOG:COG0464 GO:GO:0017111
Gene3D:2.40.40.20 InterPro:IPR009010 SUPFAM:SSF50692
InterPro:IPR015415 Pfam:PF09336 EMBL:AACQ01000114 EMBL:AACQ01000113
HOGENOM:HOG000223224 KO:K13525 InterPro:IPR004201
PANTHER:PTHR23077:SF18 Pfam:PF02933 SMART:SM01072 SMART:SM01073
TIGRFAMs:TIGR01243 RefSeq:XP_713945.1 RefSeq:XP_714003.1
ProteinModelPortal:Q59WG3 SMR:Q59WG3 STRING:Q59WG3 GeneID:3644394
GeneID:3644440 KEGG:cal:CaO19.2340 KEGG:cal:CaO19.9876
Uniprot:Q59WG3
Length = 826
Score = 241 (89.9 bits), Expect = 4.1e-30, Sum P(2) = 4.1e-30
Identities = 62/181 (34%), Positives = 91/181 (50%)
Query: 15 FIRVVGSEFVQKYLGEGPRMVRDVFRLAKENSPXXXXXXXXXXXXTKRFDAQTGADREVQ 74
F + G E + K GE +R F A++NSP KR D G EV+
Sbjct: 277 FFLINGPEIMSKMAGESESNLRKAFEEAEKNSPSIIFIDEIDSIAPKR-DKTNG---EVE 332
Query: 75 R-ILLELLNQMDGFDQTTNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLVF 133
R ++ +LL MDG +NV VI ATNR +++DPAL R GR DR+++ +PD + +
Sbjct: 333 RRVVSQLLTLMDGMKARSNVVVIAATNRPNSIDPALRRFGRFDREVDIGVPDAEGRLEIL 392
Query: 134 STITAKMNLSDEVDLEDYVARPDRISGADINAICQEVIMATNRADTLDPALLRPGRLDRK 193
T M L+D+VDLE + GADI ++C E M R + +D L +D +
Sbjct: 393 RIHTKNMKLADDVDLEAIASETHGFVGADIASLCSEAAMQQIR-EKMDLIDLEEETIDTE 451
Query: 194 I 194
+
Sbjct: 452 V 452
Score = 234 (87.4 bits), Expect = 5.7e-17, P = 5.7e-17
Identities = 58/167 (34%), Positives = 80/167 (47%)
Query: 2 LLCTSFDTELVTAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENSPXXXXXXXXXXXXTK 61
LL + TE+ FI V G E + + GE +RD+F A+ +P
Sbjct: 537 LLAKAVATEVSANFISVKGPELLSMWYGESESNIRDIFDKARAAAPTVVFLDELDSIAKA 596
Query: 62 RFDAQTGADREVQRILLELLNQMDGFDQTTNVKVIMATNRADTLDPALLRPGRLDRKIEF 121
R + A R++ +LL +MDG + NV VI ATNR D +DPALLRPGRLD+ I
Sbjct: 597 RGGSHGDAGGASDRVVNQLLTEMDGMNAKKNVFVIGATNRPDQIDPALLRPGRLDQLIYV 656
Query: 122 PLPDRRQKRLVFSTITAKMNLSDEVDLEDYVARPDRISGADINAICQ 168
PLPD + + L +DL + SGAD++ I Q
Sbjct: 657 PLPDEPARLSILQAQLRNTPLEPGLDLNEIAKITHGFSGADLSYIVQ 703
Score = 187 (70.9 bits), Expect = 1.9e-11, P = 1.9e-11
Identities = 41/110 (37%), Positives = 62/110 (56%)
Query: 204 KRLVFSTITAKMNFMLNIGNLQVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLV 263
+R V S + M+ M N+ VI ATNR +++DPAL R GR DR+++ +PD + +
Sbjct: 332 ERRVVSQLLTLMDGMKARSNVVVIAATNRPNSIDPALRRFGRFDREVDIGVPDAEGRLEI 391
Query: 264 FSTITAKMNLSDEVDLEDYVARPDRISGADINAICQEAGMHAVRENRYIV 313
T M L+D+VDLE + GADI ++C EA M +RE ++
Sbjct: 392 LRIHTKNMKLADDVDLEAIASETHGFVGADIASLCSEAAMQQIREKMDLI 441
Score = 155 (59.6 bits), Expect = 4.1e-30, Sum P(2) = 4.1e-30
Identities = 37/103 (35%), Positives = 55/103 (53%)
Query: 207 VFSTITAKMNFMLNIGNLQVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLVFST 266
V + + +M+ M N+ VI ATNR D +DPALLRPGRLD+ I PLPD + +
Sbjct: 611 VVNQLLTEMDGMNAKKNVFVIGATNRPDQIDPALLRPGRLDQLIYVPLPDEPARLSILQA 670
Query: 267 ITAKMNLSDEVDLEDYVARPDRISGADINAICQEAGMHAVREN 309
L +DL + SGAD++ I Q + A++++
Sbjct: 671 QLRNTPLEPGLDLNEIAKITHGFSGADLSYIVQRSAKFAIKDS 713
Score = 117 (46.2 bits), Expect = 3.9e-26, Sum P(2) = 3.9e-26
Identities = 42/127 (33%), Positives = 65/127 (51%)
Query: 170 VIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLVFSTITAKM-NFMLNIG-NL-QV 226
VI ATNR D +DPALLRPGRLD+ I PLPD RL S + A++ N L G +L ++
Sbjct: 630 VIGATNRPDQIDPALLRPGRLDQLIYVPLPDE-PARL--SILQAQLRNTPLEPGLDLNEI 686
Query: 227 IMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLVFSTITAKMNLSDEVDLEDYVARP 286
T+ D + + + R +F + D + ++ + I + ++V ED +
Sbjct: 687 AKITHGFSGADLSYI----VQRSAKFAIKDSIEAQVKINKIKEE---KEKVKTEDVDMKV 739
Query: 287 DRISGAD 293
D + D
Sbjct: 740 DEVEEED 746
>ASPGD|ASPL0000069340 [details] [associations]
symbol:AN7254 species:162425 "Emericella nidulans"
[GO:0071470 "cellular response to osmotic stress" evidence=IEP]
[GO:0097308 "cellular response to farnesol" evidence=IEP]
[GO:0030970 "retrograde protein transport, ER to cytosol"
evidence=IEA] [GO:0031134 "sister chromatid biorientation"
evidence=IEA] [GO:0033047 "regulation of mitotic sister chromatid
segregation" evidence=IEA] [GO:0071629 "cytoplasm-associated
proteasomal ubiquitin-dependent protein catabolic process"
evidence=IEA] [GO:1900182 "positive regulation of protein
localization to nucleus" evidence=IEA] [GO:0071630
"nucleus-associated proteasomal ubiquitin-dependent protein
catabolic process" evidence=IEA] [GO:0071712 "ER-associated
misfolded protein catabolic process" evidence=IEA] [GO:0051228
"mitotic spindle disassembly" evidence=IEA] [GO:0016320
"endoplasmic reticulum membrane fusion" evidence=IEA] [GO:0034727
"piecemeal microautophagy of nucleus" evidence=IEA] [GO:0072671
"mitochondria-associated protein catabolic process" evidence=IEA]
[GO:0034517 "ribophagy" evidence=IEA] [GO:0061166 "establishment of
endoplasmic reticulum localization involved in endoplasmic
reticulum polarization at cell division site" evidence=IEA]
[GO:0016236 "macroautophagy" evidence=IEA] [GO:0043130 "ubiquitin
binding" evidence=IEA] [GO:0016887 "ATPase activity" evidence=IEA]
[GO:0043332 "mating projection tip" evidence=IEA] [GO:0000790
"nuclear chromatin" evidence=IEA] [GO:0034098 "Cdc48p-Npl4p-Ufd1p
AAA ATPase complex" evidence=IEA] [GO:0036266 "Cdc48p-Npl4p-Vms1p
AAA ATPase complex" evidence=IEA] [GO:0005829 "cytosol"
evidence=IEA] [GO:0000837 "Doa10p ubiquitin ligase complex"
evidence=IEA] [GO:0005739 "mitochondrion" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 InterPro:IPR003338 Pfam:PF02359 GO:GO:0005524
GO:GO:0006950 GO:GO:0015031 GO:GO:0007049 EMBL:BN001304 HSSP:Q01853
eggNOG:COG0464 GO:GO:0017111 Gene3D:2.40.40.20 InterPro:IPR009010
SUPFAM:SSF50692 InterPro:IPR015415 Pfam:PF09336
HOGENOM:HOG000223224 KO:K13525 InterPro:IPR004201
PANTHER:PTHR23077:SF18 Pfam:PF02933 SMART:SM01072 SMART:SM01073
TIGRFAMs:TIGR01243 EMBL:AACD01000124 RefSeq:XP_680523.1
STRING:Q5AWS6 PRIDE:Q5AWS6 GeneID:2869922 KEGG:ani:AN7254.2
OrthoDB:EOG47H8Z3 Uniprot:Q5AWS6
Length = 823
Score = 236 (88.1 bits), Expect = 4.3e-30, Sum P(2) = 4.3e-30
Identities = 60/193 (31%), Positives = 95/193 (49%)
Query: 2 LLCTSFDTELVTAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENSPXXXXXXXXXXXXTK 61
L+ + E F + G E + K GE +R F A++NSP K
Sbjct: 274 LMARAVANETGAFFFLINGPEIMSKMAGESESNLRKAFEEAEKNSPAIIFIDEIDSIAPK 333
Query: 62 RFDAQTGADREVQRILLELLNQMDGFDQTTNVKVIMATNRADTLDPALLRPGRLDRKIEF 121
R +T + E +R++ +LL MDG +NV V+ ATNR +++DPAL R GR DR+++
Sbjct: 334 R--EKTNGEVE-RRVVSQLLTLMDGMKARSNVVVMAATNRPNSIDPALRRFGRFDREVDI 390
Query: 122 PLPDRRQKRLVFSTITAKMNLSDEVDLEDYVARPDRISGADINAICQEVIMATNRADTLD 181
+PD + + S T M L ++VDLE A G+D+ ++C E M R + +D
Sbjct: 391 GIPDPTGRLEILSIHTKNMKLGEDVDLETIAAETHGYVGSDLASLCSEAAMQQIR-EKMD 449
Query: 182 PALLRPGRLDRKI 194
L +D ++
Sbjct: 450 LIDLDEDTIDAEV 462
Score = 228 (85.3 bits), Expect = 3.1e-16, P = 3.1e-16
Identities = 53/170 (31%), Positives = 81/170 (47%)
Query: 2 LLCTSFDTELVTAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENSPXXXXXXXXXXXXTK 61
+L + E FI V G E + + GE +RD+F A+ +P
Sbjct: 548 MLAKAVANECAANFISVKGPELLSMWFGESESNIRDIFDKARAAAPCVVFLDELDSIAKS 607
Query: 62 RFDAQTGADREVQRILLELLNQMDGFDQTTNVKVIMATNRADTLDPALLRPGRLDRKIEF 121
R + A R++ +LL +MDG NV VI ATNR + LD AL+RPGRLD +
Sbjct: 608 RGGSVGDAGGASDRVVNQLLTEMDGMTSKKNVFVIGATNRPEQLDAALVRPGRLDTLVYV 667
Query: 122 PLPDRRQKRLVFSTITAKMNLSDEVDLEDYVARPDRISGADINAICQEVI 171
PLPD+ + + K ++ +VD+E ++ SGAD+ + Q +
Sbjct: 668 PLPDQASREGILKAQLRKTPVASDVDIEFIASKTHGFSGADLGFVTQRAV 717
Score = 182 (69.1 bits), Expect = 6.8e-11, P = 6.8e-11
Identities = 41/115 (35%), Positives = 65/115 (56%)
Query: 204 KRLVFSTITAKMNFMLNIGNLQVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLV 263
+R V S + M+ M N+ V+ ATNR +++DPAL R GR DR+++ +PD + +
Sbjct: 342 ERRVVSQLLTLMDGMKARSNVVVMAATNRPNSIDPALRRFGRFDREVDIGIPDPTGRLEI 401
Query: 264 FSTITAKMNLSDEVDLEDYVARPDRISGADINAICQEAGMHAVRENRYIV-LPKD 317
S T M L ++VDLE A G+D+ ++C EA M +RE ++ L +D
Sbjct: 402 LSIHTKNMKLGEDVDLETIAAETHGYVGSDLASLCSEAAMQQIREKMDLIDLDED 456
Score = 162 (62.1 bits), Expect = 4.3e-30, Sum P(2) = 4.3e-30
Identities = 36/103 (34%), Positives = 59/103 (57%)
Query: 207 VFSTITAKMNFMLNIGNLQVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLVFST 266
V + + +M+ M + N+ VI ATNR + LD AL+RPGRLD + PLPD+ + +
Sbjct: 622 VVNQLLTEMDGMTSKKNVFVIGATNRPEQLDAALVRPGRLDTLVYVPLPDQASREGILKA 681
Query: 267 ITAKMNLSDEVDLEDYVARPDRISGADINAICQEAGMHAVREN 309
K ++ +VD+E ++ SGAD+ + Q A A++E+
Sbjct: 682 QLRKTPVASDVDIEFIASKTHGFSGADLGFVTQRAVKLAIKES 724
>UNIPROTKB|F1NG80 [details] [associations]
symbol:SPATA5L1 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GeneTree:ENSGT00700000104502 GO:GO:0017111 OMA:TWEQIGG
EMBL:AADN02041604 IPI:IPI00596203 Ensembl:ENSGALT00000009112
Uniprot:F1NG80
Length = 748
Score = 203 (76.5 bits), Expect = 5.3e-30, Sum P(2) = 5.3e-30
Identities = 42/87 (48%), Positives = 55/87 (63%)
Query: 223 NLQVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLVFSTITAKMNLSDEVDLEDY 282
+ V+ ATNR D LD ALLRPGRLDR I P PD + + + T K+ L +V L+D
Sbjct: 621 DFMVVAATNRPDMLDDALLRPGRLDRVIYIPPPDLKGRLSILKICTEKIPLDTDVSLQDI 680
Query: 283 VARPDRISGADINAICQEAGMHAVREN 309
AR D SGADI +C+EA + A++EN
Sbjct: 681 AARTDLFSGADIENLCKEAALLALQEN 707
Score = 201 (75.8 bits), Expect = 5.3e-30, Sum P(2) = 5.3e-30
Identities = 50/158 (31%), Positives = 74/158 (46%)
Query: 29 GEGPRMVRDVFRLAKENS---PXXXXXXXXXXXXTKRFDAQTGADREVQRILLELLNQMD 85
GE +R VF +E S P KR + + + R++ +LL +D
Sbjct: 273 GESEENLRSVFEKGREMSCEGPTVLFIDEIDALCPKRGSSNSAPE---DRLVAQLLTLLD 329
Query: 86 GFDQTTNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLVFSTITAKMNLSDE 145
G + + V+ ATNR D LDPAL RPGR DR++ P Q+R + +T M +S +
Sbjct: 330 GVGRKDRMVVVAATNRPDALDPALRRPGRFDREVIIGTPTLTQRRSILQMLTCSMPISTD 389
Query: 146 VDLEDYVARPDRISGADINAICQEVIMATNRADTLDPA 183
+DL GAD+ A+C+E M +LD A
Sbjct: 390 IDLVKLAEMTTGYVGADLTALCREAAMQAVFHSSLDSA 427
Score = 201 (75.8 bits), Expect = 1.4e-18, Sum P(2) = 1.4e-18
Identities = 44/114 (38%), Positives = 62/114 (54%)
Query: 95 VIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLVFSTITAKMNLSDEVDLEDYVAR 154
V+ ATNR D LD ALLRPGRLDR I P PD + + + T K+ L +V L+D AR
Sbjct: 624 VVAATNRPDMLDDALLRPGRLDRVIYIPPPDLKGRLSILKICTEKIPLDTDVSLQDIAAR 683
Query: 155 PDRISGADINAICQEVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLVF 208
D SGADI +C+E + + + L+ ++ G + ++ P K L F
Sbjct: 684 TDLFSGADIENLCKEAALLALQENGLEATAVKHGHFVKSLQTVKPSLSMKDLEF 737
Score = 182 (69.1 bits), Expect = 2.2e-10, Sum P(2) = 2.2e-10
Identities = 43/127 (33%), Positives = 67/127 (52%)
Query: 203 QKRLVFSTITAKMNFMLNIGNLQVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRL 262
+ RLV +T ++ + + V+ ATNR D LDPAL RPGR DR++ P Q+R
Sbjct: 317 EDRLVAQLLTL-LDGVGRKDRMVVVAATNRPDALDPALRRPGRFDREVIIGTPTLTQRRS 375
Query: 263 VFSTITAKMNLSDEVDLEDYVARPDRISGADINAICQEAGMHAVREN-----RYIVLPKD 317
+ +T M +S ++DL GAD+ A+C+EA M AV + ++ D
Sbjct: 376 ILQMLTCSMPISTDIDLVKLAEMTTGYVGADLTALCREAAMQAVFHSSLDSAEVLINMAD 435
Query: 318 FEKGYKK 324
F++ +KK
Sbjct: 436 FQEAFKK 442
Score = 117 (46.2 bits), Expect = 5.7e-21, Sum P(2) = 5.7e-21
Identities = 31/70 (44%), Positives = 39/70 (55%)
Query: 170 VIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLVFSTITAKMNFMLNIGNLQVIMA 229
V+ ATNR D LD ALLRPGRLDR I P PD + + + T K+ ++ +LQ I A
Sbjct: 624 VVAATNRPDMLDDALLRPGRLDRVIYIPPPDLKGRLSILKICTEKIPLDTDV-SLQDIAA 682
Query: 230 TNRADTLDPA 239
R D A
Sbjct: 683 --RTDLFSGA 690
Score = 114 (45.2 bits), Expect = 6.6e-21, Sum P(3) = 6.6e-21
Identities = 23/52 (44%), Positives = 30/52 (57%)
Query: 170 VIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLVFSTITAKMNFMLNI 221
V+ ATNR D LDPAL RPGR DR++ P Q+R + +T M +I
Sbjct: 339 VVAATNRPDALDPALRRPGRFDREVIIGTPTLTQRRSILQMLTCSMPISTDI 390
Score = 94 (38.1 bits), Expect = 8.1e-19, Sum P(2) = 8.1e-19
Identities = 21/73 (28%), Positives = 38/73 (52%)
Query: 14 AFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENSPXXXXXXXXXXXXTKRFDAQTGADREV 73
+F+ V G+E Y+G+ +++ VFR A+ N+P R +++G
Sbjct: 524 SFLSVSGAELFSPYVGDSEKILSQVFRQARANTPAIIFLDEIDSILGSRSHSKSGHGVS- 582
Query: 74 QRILLELLNQMDG 86
+R+L LLN++DG
Sbjct: 583 ERVLSVLLNELDG 595
Score = 37 (18.1 bits), Expect = 6.6e-21, Sum P(3) = 6.6e-21
Identities = 11/31 (35%), Positives = 15/31 (48%)
Query: 85 DGF---DQTTNVKVIMATNRADTLDPALLRP 112
DG+ D + + A R TL P LL+P
Sbjct: 67 DGYVQADPACSTGLTAAELRGLTLSPGLLQP 97
>CGD|CAL0002187 [details] [associations]
symbol:orf19.6432 species:5476 "Candida albicans" [GO:0005829
"cytosol" evidence=IEA] [GO:0030687 "preribosome, large subunit
precursor" evidence=IEA] [GO:0042493 "response to drug"
evidence=IEA] [GO:0042273 "ribosomal large subunit biogenesis"
evidence=IEA] [GO:0016887 "ATPase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 InterPro:IPR003338
CGD:CAL0002187 GO:GO:0005524 EMBL:AACQ01000073 EMBL:AACQ01000072
eggNOG:COG0464 KO:K14575 GO:GO:0017111 InterPro:IPR009010
SUPFAM:SSF50692 SMART:SM01073 RefSeq:XP_716187.1 RefSeq:XP_716270.1
ProteinModelPortal:Q5A331 GeneID:3642106 GeneID:3642160
KEGG:cal:CaO19.13790 KEGG:cal:CaO19.6432 Uniprot:Q5A331
Length = 766
Score = 249 (92.7 bits), Expect = 4.7e-19, P = 4.7e-19
Identities = 63/176 (35%), Positives = 88/176 (50%)
Query: 2 LLCTSFDTELVTAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENSPXXXXXXXXXXXXTK 61
L + TE F+ V G E KY+GE R +R++FR A+ SP
Sbjct: 548 LTAKALATESGLNFLAVKGPEIFNKYVGESERAIREIFRKARAASPSIIFFDEIDAIAGD 607
Query: 62 RF-DAQTGADREVQRILLELLNQMDGFDQTTNVKVIMATNRADTLDPALLRPGRLDRKIE 120
R D+ T A +L LLN++DG ++ V ++ ATN+ +DPALLRPGRLDR I
Sbjct: 608 RDGDSSTTA---ASNVLTSLLNEIDGVEELKGVVIVGATNKPTEIDPALLRPGRLDRHIY 664
Query: 121 FPLPDRRQKRLVFSTITAKMNLS--DE-VDLEDYVARPDRISGADINAICQEVIMA 173
PD + + + K NL DE VDL+ D SGA++ +CQE +A
Sbjct: 665 VAPPDYDARLQILQKCSRKFNLQSGDESVDLQKLAELTDGCSGAEVTLLCQEAGLA 720
Score = 220 (82.5 bits), Expect = 8.4e-30, Sum P(2) = 8.4e-30
Identities = 55/170 (32%), Positives = 86/170 (50%)
Query: 16 IRVVGSEFVQKYLGEGPRMVRDVFRLAKENSPXXXXXXXXXXXXTKRFDAQTGADREVQR 75
+ + G V KYLGE +RD+F AK+ P R +G + E R
Sbjct: 293 LTINGPSIVSKYLGETENAIRDIFNEAKKFQPSIIFMDEIDSIAPSRTSDDSG-ETE-SR 350
Query: 76 ILLELLNQMDGFDQTTNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLVFST 135
++ +LL MDG + VI ATNR +++D AL RPGR D+++E +PD + + +
Sbjct: 351 VVAQLLTVMDGMGDNGRIVVIGATNRPNSIDSALRRPGRFDQEVEIGIPDVEAREEILTK 410
Query: 136 ITAKMNLSD-EVDLEDYVARPDRISG---ADINAICQEVIM-ATNRADTL 180
AKMN ++ E+ + + G AD+ A+C+E +M A NR T+
Sbjct: 411 QFAKMNSEKCQITKEEIASIASKTHGYVGADLTALCRESVMKAINRGLTV 460
Score = 179 (68.1 bits), Expect = 8.4e-30, Sum P(2) = 8.4e-30
Identities = 46/123 (37%), Positives = 67/123 (54%)
Query: 209 STITAKMNFMLNIGNLQ---VIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLVFS 265
+ +T+ +N + + L+ ++ ATN+ +DPALLRPGRLDR I PD + +
Sbjct: 619 NVLTSLLNEIDGVEELKGVVIVGATNKPTEIDPALLRPGRLDRHIYVAPPDYDARLQILQ 678
Query: 266 TITAKMNLS--DE-VDLEDYVARPDRISGADINAICQEAGMHAVRENRYI--VLPKDFEK 320
+ K NL DE VDL+ D SGA++ +CQEAG+ A+ EN+ V K FE
Sbjct: 679 KCSRKFNLQSGDESVDLQKLAELTDGCSGAEVTLLCQEAGLAAIMENKEATTVTNKHFEH 738
Query: 321 GYK 323
K
Sbjct: 739 ALK 741
Score = 155 (59.6 bits), Expect = 6.4e-08, P = 6.4e-08
Identities = 42/149 (28%), Positives = 75/149 (50%)
Query: 175 NRADTLDPALLRPGRLDRKIEFPLPD---RRQKRLVFSTITAKMNFMLNIGNLQVIMATN 231
N A P+++ +D D + R+V +T M+ M + G + VI ATN
Sbjct: 317 NEAKKFQPSIIFMDEIDSIAPSRTSDDSGETESRVVAQLLTV-MDGMGDNGRIVVIGATN 375
Query: 232 RADTLDPALLRPGRLDRKIEFPLPDRRQKRLVFSTITAKMNLSD-EVDLEDYVARPDRIS 290
R +++D AL RPGR D+++E +PD + + + AKMN ++ E+ + +
Sbjct: 376 RPNSIDSALRRPGRFDQEVEIGIPDVEAREEILTKQFAKMNSEKCQITKEEIASIASKTH 435
Query: 291 G---ADINAICQEAGMHAVRENRYIVLPK 316
G AD+ A+C+E+ M A+ + +P+
Sbjct: 436 GYVGADLTALCRESVMKAINRGLTVGIPQ 464
Score = 104 (41.7 bits), Expect = 5.9e-17, Sum P(2) = 5.9e-17
Identities = 21/47 (44%), Positives = 31/47 (65%)
Query: 170 VIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLVFSTITAKMN 216
VI ATNR +++D AL RPGR D+++E +PD + + + AKMN
Sbjct: 370 VIGATNRPNSIDSALRRPGRFDQEVEIGIPDVEAREEILTKQFAKMN 416
Score = 96 (38.9 bits), Expect = 4.0e-21, Sum P(2) = 4.0e-21
Identities = 20/47 (42%), Positives = 27/47 (57%)
Query: 170 VIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLVFSTITAKMN 216
++ ATN+ +DPALLRPGRLDR I PD + + + K N
Sbjct: 639 IVGATNKPTEIDPALLRPGRLDRHIYVAPPDYDARLQILQKCSRKFN 685
>DICTYBASE|DDB_G0288065 [details] [associations]
symbol:cdcD "CDC48 family AAA ATPase" species:44689
"Dictyostelium discoideum" [GO:0005615 "extracellular space"
evidence=IDA] [GO:0045335 "phagocytic vesicle" evidence=IDA]
[GO:0009617 "response to bacterium" evidence=IEP] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0030433 "ER-associated protein catabolic process" evidence=ISS]
[GO:0016887 "ATPase activity" evidence=ISS] [GO:0007049 "cell
cycle" evidence=ISS] [GO:0006511 "ubiquitin-dependent protein
catabolic process" evidence=ISS] [GO:0006200 "ATP catabolic
process" evidence=ISS] [GO:0005829 "cytosol" evidence=ISS]
[GO:0051301 "cell division" evidence=IEA] [GO:0044351
"macropinocytosis" evidence=RCA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005938
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 InterPro:IPR003338
dictyBase:DDB_G0288065 Pfam:PF02359 GO:GO:0005829 GO:GO:0005524
GO:GO:0005615 GO:GO:0045335 GO:GO:0009617 GO:GO:0051301
GenomeReviews:CM000154_GR GO:GO:0016887 GO:GO:0007049 GO:GO:0030433
HSSP:Q01853 eggNOG:COG0464 Gene3D:2.40.40.20 InterPro:IPR009010
SUPFAM:SSF50692 EMBL:AAFI02000109 InterPro:IPR015415 Pfam:PF09336
KO:K13525 InterPro:IPR004201 PANTHER:PTHR23077:SF18 Pfam:PF02933
SMART:SM01072 SMART:SM01073 TIGRFAMs:TIGR01243 OMA:AYRPIHK
ProtClustDB:CLSZ2429060 EMBL:U83085 RefSeq:XP_636910.1
ProteinModelPortal:P90532 SMR:P90532 STRING:P90532 PRIDE:P90532
EnsemblProtists:DDB0191154 GeneID:8626465 KEGG:ddi:DDB_G0288065
InParanoid:P90532 Uniprot:P90532
Length = 793
Score = 249 (92.7 bits), Expect = 5.0e-19, P = 5.0e-19
Identities = 57/167 (34%), Positives = 84/167 (50%)
Query: 2 LLCTSFDTELVTAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENSPXXXXXXXXXXXXTK 61
LL + E FI + G E + + GE VR++F A++ +P
Sbjct: 524 LLAKAIANECQANFISIKGPELLTMWFGESEANVRELFDKARQAAPCVLFFDELDSIARS 583
Query: 62 RFDAQTGADREVQRILLELLNQMDGFDQTTNVKVIMATNRADTLDPALLRPGRLDRKIEF 121
R +Q A R++ ++L +MDG + NV +I ATNR D +DPA+LRPGRLD+ I
Sbjct: 584 RGSSQGDAGGAGDRVINQILTEMDGMNAKKNVFIIGATNRPDIIDPAILRPGRLDQLIYI 643
Query: 122 PLPDRRQKRLVFSTITAKMNLSDEVDLEDYVARPDRISGADINAICQ 168
PLPD + + K ++ +VDLE + SGAD+ ICQ
Sbjct: 644 PLPDLPSRVAILKACLNKSPVAKDVDLEFLGQKTQGFSGADLTEICQ 690
Score = 213 (80.0 bits), Expect = 1.8e-29, Sum P(2) = 1.8e-29
Identities = 56/169 (33%), Positives = 80/169 (47%)
Query: 15 FIRVVGSEFVQKYLGEGPRMVRDVFRLAKENSPXXXXXXXXXXXXTKRFDAQTGADREVQ 74
F + G E + K GE +R F A++N+P KR Q +R
Sbjct: 264 FFLINGPEIMSKLAGESESNLRKAFEEAEKNAPSIIFIDEIDSIAPKREKTQGEVER--- 320
Query: 75 RILLELLNQMDGFDQTTNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLVFS 134
RI+ +LL MDG +V V+ ATNR +++DPAL R GR DR+I+ +PD + +
Sbjct: 321 RIVSQLLTLMDGLKSRAHVIVMGATNRPNSIDPALRRFGRFDREIDITIPDATGRLEIMR 380
Query: 135 TITAKMNLSDEVDLEDYVARPDRISGADINAICQEVIMATNRA--DTLD 181
T M L + VDLE GAD+ A+C E + R D +D
Sbjct: 381 IHTKNMKLDETVDLEAVANETHGYVGADLAALCTESALQCIREKMDVID 429
Score = 185 (70.2 bits), Expect = 1.8e-29, Sum P(2) = 1.8e-29
Identities = 45/113 (39%), Positives = 63/113 (55%)
Query: 207 VFSTITAKMNFMLNIGNLQVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLVFST 266
V + I +M+ M N+ +I ATNR D +DPA+LRPGRLD+ I PLPD + +
Sbjct: 598 VINQILTEMDGMNAKKNVFIIGATNRPDIIDPAILRPGRLDQLIYIPLPDLPSRVAILKA 657
Query: 267 ITAKMNLSDEVDLEDYVARPDRISGADINAICQEAGMHAVRENRYIVLPKDFE 319
K ++ +VDLE + SGAD+ ICQ A A+RE+ + KD E
Sbjct: 658 CLNKSPVAKDVDLEFLGQKTQGFSGADLTEICQRACKLAIRES----IEKDIE 706
Score = 162 (62.1 bits), Expect = 1.1e-08, P = 1.1e-08
Identities = 36/111 (32%), Positives = 62/111 (55%)
Query: 203 QKRLVFSTITAKMNFMLNIGNLQVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRL 262
++R+V +T M+ + + ++ V+ ATNR +++DPAL R GR DR+I+ +PD +
Sbjct: 319 ERRIVSQLLTL-MDGLKSRAHVIVMGATNRPNSIDPALRRFGRFDREIDITIPDATGRLE 377
Query: 263 VFSTITAKMNLSDEVDLEDYVARPDRISGADINAICQEAGMHAVRENRYIV 313
+ T M L + VDLE GAD+ A+C E+ + +RE ++
Sbjct: 378 IMRIHTKNMKLDETVDLEAVANETHGYVGADLAALCTESALQCIREKMDVI 428
Score = 111 (44.1 bits), Expect = 9.6e-22, Sum P(2) = 9.6e-22
Identities = 21/31 (67%), Positives = 25/31 (80%)
Query: 170 VIMATNRADTLDPALLRPGRLDRKIEFPLPD 200
+I ATNR D +DPA+LRPGRLD+ I PLPD
Sbjct: 617 IIGATNRPDIIDPAILRPGRLDQLIYIPLPD 647
Score = 88 (36.0 bits), Expect = 5.9e-16, Sum P(2) = 5.9e-16
Identities = 17/31 (54%), Positives = 24/31 (77%)
Query: 170 VIMATNRADTLDPALLRPGRLDRKIEFPLPD 200
V+ ATNR +++DPAL R GR DR+I+ +PD
Sbjct: 341 VMGATNRPNSIDPALRRFGRFDREIDITIPD 371
>SGD|S000004389 [details] [associations]
symbol:AFG2 "ATPase of the CDC48/PAS1/SEC18 (AAA) family,
forms a hexameric complex" species:4932 "Saccharomyces cerevisiae"
[GO:0030687 "preribosome, large subunit precursor"
evidence=IDA;IMP] [GO:0042493 "response to drug" evidence=IMP]
[GO:0005622 "intracellular" evidence=IDA] [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0016887 "ATPase activity" evidence=IDA]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0042273 "ribosomal
large subunit biogenesis" evidence=IMP] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 SGD:S000004389 GO:GO:0005524 GO:GO:0042493
EMBL:BK006945 GO:GO:0016887 eggNOG:COG0464 HOGENOM:HOG000223225
KO:K14575 OrthoDB:EOG49CTH0 GO:GO:0042273 EMBL:L14615 EMBL:U19729
EMBL:AY693116 PIR:S39110 RefSeq:NP_013501.1
ProteinModelPortal:P32794 SMR:P32794 DIP:DIP-4470N IntAct:P32794
MINT:MINT-566202 STRING:P32794 PaxDb:P32794 PeptideAtlas:P32794
EnsemblFungi:YLR397C GeneID:851113 KEGG:sce:YLR397C CYGD:YLR397c
GeneTree:ENSGT00700000104502 OMA:MLLRCVA NextBio:967827
Genevestigator:P32794 GermOnline:YLR397C GO:GO:0030687
Uniprot:P32794
Length = 780
Score = 260 (96.6 bits), Expect = 2.7e-21, P = 2.7e-21
Identities = 64/183 (34%), Positives = 90/183 (49%)
Query: 2 LLCTSFDTELVTAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENSPXXXXXXXXXXXXTK 61
L + TE F+ V G E KY+GE R +R++FR A+ +P
Sbjct: 565 LTAKALATESGINFLAVKGPEIFNKYVGESERAIREIFRKARSAAPSIIFFDEIDALSPD 624
Query: 62 RFDAQTGADREVQRILLELLNQMDGFDQTTNVKVIMATNRADTLDPALLRPGRLDRKIEF 121
R + T A +L LLN++DG ++ V ++ ATNR D +D ALLRPGRLDR I
Sbjct: 625 RDGSSTSA---ANHVLTSLLNEIDGVEELKGVVIVAATNRPDEIDAALLRPGRLDRHIYV 681
Query: 122 PLPDRRQKRLVFSTITAKMNLSDE-VDLEDYVARPDRISGADINAICQEVIMATNRADTL 180
PD + + T K N + VDL + R + SGA++ +CQE +A D L
Sbjct: 682 GPPDVNARLEILKKCTKKFNTEESGVDLHELADRTEGYSGAEVVLLCQEAGLAAIMED-L 740
Query: 181 DPA 183
D A
Sbjct: 741 DVA 743
Score = 213 (80.0 bits), Expect = 3.5e-29, Sum P(2) = 3.5e-29
Identities = 54/164 (32%), Positives = 85/164 (51%)
Query: 16 IRVVGSEFVQKYLGEGPRMVRDVFRLAKENSPXXXXXXXXXXXXTKRFDAQTGADREVQ- 74
+ + G V KYLGE +RD+F A++ P R + +G EV+
Sbjct: 308 LTINGPSIVSKYLGETEAALRDIFNEARKYQPSIIFIDEIDSIAPNRANDDSG---EVES 364
Query: 75 RILLELLNQMDGFDQTTNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPD--RRQKRLV 132
R++ LL MDG V VI ATNR +++DPAL RPGR D+++E +PD R L
Sbjct: 365 RVVATLLTLMDGMGAAGKVVVIAATNRPNSVDPALRRPGRFDQEVEIGIPDVDARFDILT 424
Query: 133 --FSTITAKMNLSDEVDLEDYVARPDRISGADINAICQEVIMAT 174
FS +++ ++ D ++ ++ GAD+ A+C+E +M T
Sbjct: 425 KQFSRMSSDRHVLDSEAIKYIASKTHGYVGADLTALCRESVMKT 468
Score = 182 (69.1 bits), Expect = 3.5e-29, Sum P(2) = 3.5e-29
Identities = 43/123 (34%), Positives = 69/123 (56%)
Query: 207 VFSTITAKMNFMLNIGNLQVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLVFST 266
V +++ +++ + + + ++ ATNR D +D ALLRPGRLDR I PD + +
Sbjct: 636 VLTSLLNEIDGVEELKGVVIVAATNRPDEIDAALLRPGRLDRHIYVGPPDVNARLEILKK 695
Query: 267 ITAKMNLSDE-VDLEDYVARPDRISGADINAICQEAGMHAVRENRYI--VLPKDFEKGYK 323
T K N + VDL + R + SGA++ +CQEAG+ A+ E+ + V + FEK +K
Sbjct: 696 CTKKFNTEESGVDLHELADRTEGYSGAEVVLLCQEAGLAAIMEDLDVAKVELRHFEKAFK 755
Query: 324 KCA 326
A
Sbjct: 756 GIA 758
Score = 145 (56.1 bits), Expect = 8.5e-07, P = 8.5e-07
Identities = 35/105 (33%), Positives = 61/105 (58%)
Query: 207 VFSTITAKMNFMLNIGNLQVIMATNRADTLDPALLRPGRLDRKIEFPLPD--RRQKRLV- 263
V +T+ M+ M G + VI ATNR +++DPAL RPGR D+++E +PD R L
Sbjct: 366 VVATLLTLMDGMGAAGKVVVIAATNRPNSVDPALRRPGRFDQEVEIGIPDVDARFDILTK 425
Query: 264 -FSTITAKMNLSDEVDLEDYVARPDRISGADINAICQEAGMHAVR 307
FS +++ ++ D ++ ++ GAD+ A+C+E+ M ++
Sbjct: 426 QFSRMSSDRHVLDSEAIKYIASKTHGYVGADLTALCRESVMKTIQ 470
Score = 103 (41.3 bits), Expect = 6.2e-21, Sum P(2) = 6.2e-21
Identities = 22/47 (46%), Positives = 27/47 (57%)
Query: 170 VIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLVFSTITAKMN 216
++ ATNR D +D ALLRPGRLDR I PD + + T K N
Sbjct: 655 IVAATNRPDEIDAALLRPGRLDRHIYVGPPDVNARLEILKKCTKKFN 701
Score = 100 (40.3 bits), Expect = 7.2e-17, Sum P(2) = 7.2e-17
Identities = 18/31 (58%), Positives = 25/31 (80%)
Query: 170 VIMATNRADTLDPALLRPGRLDRKIEFPLPD 200
VI ATNR +++DPAL RPGR D+++E +PD
Sbjct: 385 VIAATNRPNSVDPALRRPGRFDQEVEIGIPD 415
>WB|WBGene00007352 [details] [associations]
symbol:cdc-48.1 species:6239 "Caenorhabditis elegans"
[GO:0016887 "ATPase activity" evidence=IEA;IDA] [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0006281 "DNA repair" evidence=IEA] [GO:0006310
"DNA recombination" evidence=IEA] [GO:0009378 "four-way junction
helicase activity" evidence=IEA] [GO:0009792 "embryo development
ending in birth or egg hatching" evidence=IGI;IMP] [GO:0040002
"collagen and cuticulin-based cuticle development" evidence=IMP]
[GO:0002119 "nematode larval development" evidence=IMP] [GO:0040018
"positive regulation of multicellular organism growth"
evidence=IMP] [GO:0040011 "locomotion" evidence=IMP] [GO:0000003
"reproduction" evidence=IMP] [GO:0051301 "cell division"
evidence=IMP] [GO:0000910 "cytokinesis" evidence=IMP] [GO:0007126
"meiosis" evidence=IMP] [GO:0030968 "endoplasmic reticulum unfolded
protein response" evidence=IMP] [GO:0071712 "ER-associated
misfolded protein catabolic process" evidence=IGI] [GO:0034098
"Cdc48p-Npl4p-Ufd1p AAA ATPase complex" evidence=IPI] [GO:0005634
"nucleus" evidence=IDA] [GO:0006200 "ATP catabolic process"
evidence=IDA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 InterPro:IPR003338 Pfam:PF02359 GO:GO:0005524
GO:GO:0005634 GO:GO:0009792 GO:GO:0007126 GO:GO:0002119
GO:GO:0040011 GO:GO:0040018 GO:GO:0016887 GO:GO:0000910
eggNOG:COG0464 Gene3D:2.40.40.20 InterPro:IPR009010 SUPFAM:SSF50692
InterPro:IPR015415 Pfam:PF09336 GO:GO:0030968 GO:GO:0040002
HOGENOM:HOG000223224 KO:K13525 OMA:QIANECH InterPro:IPR004201
PANTHER:PTHR23077:SF18 Pfam:PF02933 SMART:SM01072 SMART:SM01073
TIGRFAMs:TIGR01243 GO:GO:0034098 GeneTree:ENSGT00700000104534
GO:GO:0071712 EMBL:Z49886 PIR:T18970 RefSeq:NP_496273.1
ProteinModelPortal:P54811 SMR:P54811 DIP:DIP-26650N IntAct:P54811
MINT:MINT-1061999 STRING:P54811 PaxDb:P54811 PRIDE:P54811
EnsemblMetazoa:C06A1.1.1 EnsemblMetazoa:C06A1.1.2 GeneID:174624
KEGG:cel:CELE_C06A1.1 UCSC:C06A1.1.1 CTD:174624 WormBase:C06A1.1
InParanoid:P54811 NextBio:884814 Uniprot:P54811
Length = 809
Score = 240 (89.5 bits), Expect = 9.5e-18, P = 9.5e-18
Identities = 62/193 (32%), Positives = 85/193 (44%)
Query: 2 LLCTSFDTELVTAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENSPXXXXXXXXXXXXTK 61
LL + E FI + G E + + GE VRDVF A+ +P
Sbjct: 532 LLAKAIANECQANFISIKGPELLTMWFGESEANVRDVFDKARAAAPCVLFFDELDSIAKA 591
Query: 62 RFDAQTG-ADREVQRILLELLNQMDGFDQTTNVKVIMATNRADTLDPALLRPGRLDRKIE 120
R G R++ ++L +MDG + NV +I ATNR D +DPA+LRPGRLD+ I
Sbjct: 592 RGGGAGGDGGGASDRVINQVLTEMDGMNAKKNVFIIGATNRPDIIDPAVLRPGRLDQLIY 651
Query: 121 FPLPDRRQKRLVFSTITAKMNLSDEVDLEDYVARPDRISGADINAICQEVIMATNRADTL 180
PLPD + + K LS ++DL SGAD+ ICQ R
Sbjct: 652 IPLPDEASRHQILKASLRKTPLSKDLDLTFLAKNTVGFSGADLTEICQRACKLAIRESIE 711
Query: 181 DPALLRPGRLDRK 193
+ R DR+
Sbjct: 712 KEIRIEKERQDRQ 724
Score = 211 (79.3 bits), Expect = 8.6e-29, Sum P(2) = 8.6e-29
Identities = 57/193 (29%), Positives = 93/193 (48%)
Query: 2 LLCTSFDTELVTAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENSPXXXXXXXXXXXXTK 61
L+ + E + F + G E + K GE +R F ++N P K
Sbjct: 259 LIARAVANETGSFFFLINGPEVMSKMSGESESNLRKAFEECEKNQPAILFIDEIDAIAPK 318
Query: 62 RFDAQTGADREVQRILLELLNQMDGFDQTTNVKVIMATNRADTLDPALLRPGRLDRKIEF 121
R +T + E +RI+ +LL MDG +N+ VI ATNR +++D AL R GR DR+I+
Sbjct: 319 R--EKTNGEVE-RRIVSQLLTLMDGVKGRSNLVVIAATNRPNSIDGALRRFGRFDREIDI 375
Query: 122 PLPDRRQKRLVFSTITAKMNLSDEVDLEDYVARPDRISGADINAICQEVIMATNRADTLD 181
+PD + + T M L+D+VDLE GAD+ ++C E + R + ++
Sbjct: 376 GIPDAVGRLEILRIHTKNMKLADDVDLEQIANECHGFVGADLASLCSEAALQQIR-EKME 434
Query: 182 PALLRPGRLDRKI 194
L ++D ++
Sbjct: 435 LIDLEDDQIDAEV 447
Score = 181 (68.8 bits), Expect = 8.6e-29, Sum P(2) = 8.6e-29
Identities = 41/103 (39%), Positives = 57/103 (55%)
Query: 207 VFSTITAKMNFMLNIGNLQVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLVFST 266
V + + +M+ M N+ +I ATNR D +DPA+LRPGRLD+ I PLPD + +
Sbjct: 607 VINQVLTEMDGMNAKKNVFIIGATNRPDIIDPAVLRPGRLDQLIYIPLPDEASRHQILKA 666
Query: 267 ITAKMNLSDEVDLEDYVARPDRISGADINAICQEAGMHAVREN 309
K LS ++DL SGAD+ ICQ A A+RE+
Sbjct: 667 SLRKTPLSKDLDLTFLAKNTVGFSGADLTEICQRACKLAIRES 709
Score = 171 (65.3 bits), Expect = 1.1e-09, P = 1.1e-09
Identities = 39/111 (35%), Positives = 62/111 (55%)
Query: 203 QKRLVFSTITAKMNFMLNIGNLQVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRL 262
++R+V +T M+ + NL VI ATNR +++D AL R GR DR+I+ +PD +
Sbjct: 327 ERRIVSQLLTL-MDGVKGRSNLVVIAATNRPNSIDGALRRFGRFDREIDIGIPDAVGRLE 385
Query: 263 VFSTITAKMNLSDEVDLEDYVARPDRISGADINAICQEAGMHAVRENRYIV 313
+ T M L+D+VDLE GAD+ ++C EA + +RE ++
Sbjct: 386 ILRIHTKNMKLADDVDLEQIANECHGFVGADLASLCSEAALQQIREKMELI 436
Score = 83 (34.3 bits), Expect = 6.0e-15, Sum P(2) = 6.0e-15
Identities = 17/31 (54%), Positives = 23/31 (74%)
Query: 170 VIMATNRADTLDPALLRPGRLDRKIEFPLPD 200
VI ATNR +++D AL R GR DR+I+ +PD
Sbjct: 349 VIAATNRPNSIDGALRRFGRFDREIDIGIPD 379
>UNIPROTKB|P54811 [details] [associations]
symbol:cdc-48.1 "Transitional endoplasmic reticulum ATPase
homolog 1" species:6239 "Caenorhabditis elegans" [GO:0005515
"protein binding" evidence=IPI] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005938
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 InterPro:IPR003338
Pfam:PF02359 GO:GO:0005524 GO:GO:0005634 GO:GO:0009792
GO:GO:0007126 GO:GO:0002119 GO:GO:0040011 GO:GO:0040018
GO:GO:0016887 GO:GO:0000910 eggNOG:COG0464 Gene3D:2.40.40.20
InterPro:IPR009010 SUPFAM:SSF50692 InterPro:IPR015415 Pfam:PF09336
GO:GO:0030968 GO:GO:0040002 HOGENOM:HOG000223224 KO:K13525
OMA:QIANECH InterPro:IPR004201 PANTHER:PTHR23077:SF18 Pfam:PF02933
SMART:SM01072 SMART:SM01073 TIGRFAMs:TIGR01243 GO:GO:0034098
GeneTree:ENSGT00700000104534 GO:GO:0071712 EMBL:Z49886 PIR:T18970
RefSeq:NP_496273.1 ProteinModelPortal:P54811 SMR:P54811
DIP:DIP-26650N IntAct:P54811 MINT:MINT-1061999 STRING:P54811
PaxDb:P54811 PRIDE:P54811 EnsemblMetazoa:C06A1.1.1
EnsemblMetazoa:C06A1.1.2 GeneID:174624 KEGG:cel:CELE_C06A1.1
UCSC:C06A1.1.1 CTD:174624 WormBase:C06A1.1 InParanoid:P54811
NextBio:884814 Uniprot:P54811
Length = 809
Score = 240 (89.5 bits), Expect = 9.5e-18, P = 9.5e-18
Identities = 62/193 (32%), Positives = 85/193 (44%)
Query: 2 LLCTSFDTELVTAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENSPXXXXXXXXXXXXTK 61
LL + E FI + G E + + GE VRDVF A+ +P
Sbjct: 532 LLAKAIANECQANFISIKGPELLTMWFGESEANVRDVFDKARAAAPCVLFFDELDSIAKA 591
Query: 62 RFDAQTG-ADREVQRILLELLNQMDGFDQTTNVKVIMATNRADTLDPALLRPGRLDRKIE 120
R G R++ ++L +MDG + NV +I ATNR D +DPA+LRPGRLD+ I
Sbjct: 592 RGGGAGGDGGGASDRVINQVLTEMDGMNAKKNVFIIGATNRPDIIDPAVLRPGRLDQLIY 651
Query: 121 FPLPDRRQKRLVFSTITAKMNLSDEVDLEDYVARPDRISGADINAICQEVIMATNRADTL 180
PLPD + + K LS ++DL SGAD+ ICQ R
Sbjct: 652 IPLPDEASRHQILKASLRKTPLSKDLDLTFLAKNTVGFSGADLTEICQRACKLAIRESIE 711
Query: 181 DPALLRPGRLDRK 193
+ R DR+
Sbjct: 712 KEIRIEKERQDRQ 724
Score = 211 (79.3 bits), Expect = 8.6e-29, Sum P(2) = 8.6e-29
Identities = 57/193 (29%), Positives = 93/193 (48%)
Query: 2 LLCTSFDTELVTAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENSPXXXXXXXXXXXXTK 61
L+ + E + F + G E + K GE +R F ++N P K
Sbjct: 259 LIARAVANETGSFFFLINGPEVMSKMSGESESNLRKAFEECEKNQPAILFIDEIDAIAPK 318
Query: 62 RFDAQTGADREVQRILLELLNQMDGFDQTTNVKVIMATNRADTLDPALLRPGRLDRKIEF 121
R +T + E +RI+ +LL MDG +N+ VI ATNR +++D AL R GR DR+I+
Sbjct: 319 R--EKTNGEVE-RRIVSQLLTLMDGVKGRSNLVVIAATNRPNSIDGALRRFGRFDREIDI 375
Query: 122 PLPDRRQKRLVFSTITAKMNLSDEVDLEDYVARPDRISGADINAICQEVIMATNRADTLD 181
+PD + + T M L+D+VDLE GAD+ ++C E + R + ++
Sbjct: 376 GIPDAVGRLEILRIHTKNMKLADDVDLEQIANECHGFVGADLASLCSEAALQQIR-EKME 434
Query: 182 PALLRPGRLDRKI 194
L ++D ++
Sbjct: 435 LIDLEDDQIDAEV 447
Score = 181 (68.8 bits), Expect = 8.6e-29, Sum P(2) = 8.6e-29
Identities = 41/103 (39%), Positives = 57/103 (55%)
Query: 207 VFSTITAKMNFMLNIGNLQVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLVFST 266
V + + +M+ M N+ +I ATNR D +DPA+LRPGRLD+ I PLPD + +
Sbjct: 607 VINQVLTEMDGMNAKKNVFIIGATNRPDIIDPAVLRPGRLDQLIYIPLPDEASRHQILKA 666
Query: 267 ITAKMNLSDEVDLEDYVARPDRISGADINAICQEAGMHAVREN 309
K LS ++DL SGAD+ ICQ A A+RE+
Sbjct: 667 SLRKTPLSKDLDLTFLAKNTVGFSGADLTEICQRACKLAIRES 709
Score = 171 (65.3 bits), Expect = 1.1e-09, P = 1.1e-09
Identities = 39/111 (35%), Positives = 62/111 (55%)
Query: 203 QKRLVFSTITAKMNFMLNIGNLQVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRL 262
++R+V +T M+ + NL VI ATNR +++D AL R GR DR+I+ +PD +
Sbjct: 327 ERRIVSQLLTL-MDGVKGRSNLVVIAATNRPNSIDGALRRFGRFDREIDIGIPDAVGRLE 385
Query: 263 VFSTITAKMNLSDEVDLEDYVARPDRISGADINAICQEAGMHAVRENRYIV 313
+ T M L+D+VDLE GAD+ ++C EA + +RE ++
Sbjct: 386 ILRIHTKNMKLADDVDLEQIANECHGFVGADLASLCSEAALQQIREKMELI 436
Score = 83 (34.3 bits), Expect = 6.0e-15, Sum P(2) = 6.0e-15
Identities = 17/31 (54%), Positives = 23/31 (74%)
Query: 170 VIMATNRADTLDPALLRPGRLDRKIEFPLPD 200
VI ATNR +++D AL R GR DR+I+ +PD
Sbjct: 349 VIAATNRPNSIDGALRRFGRFDREIDIGIPD 379
>UNIPROTKB|E1BTS8 [details] [associations]
symbol:LOC426240 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
InterPro:IPR003338 Pfam:PF02359 GO:GO:0005524 GO:GO:0017111
Gene3D:2.40.40.20 InterPro:IPR009010 SUPFAM:SSF50692
InterPro:IPR015415 Pfam:PF09336 InterPro:IPR004201
PANTHER:PTHR23077:SF18 Pfam:PF02933 SMART:SM01072 SMART:SM01073
GeneTree:ENSGT00700000104534 EMBL:AADN02060646 EMBL:AADN02060647
EMBL:AADN02060648 EMBL:AADN02060649 EMBL:AADN02060650
EMBL:AADN02060651 EMBL:AADN02060652 EMBL:AADN02060653
IPI:IPI00823321 Ensembl:ENSGALT00000039430 ArrayExpress:E1BTS8
Uniprot:E1BTS8
Length = 804
Score = 244 (91.0 bits), Expect = 2.8e-18, P = 2.8e-18
Identities = 62/210 (29%), Positives = 103/210 (49%)
Query: 2 LLCTSFDTELVTAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENSPXXXXXXXXXXXXTK 61
LL + E FI + G E + + GE VR++F A++ +P
Sbjct: 524 LLAKAIANECQANFISIKGPELLTMWFGESEANVREIFDKARQAAPCVLFFDELDSIAKA 583
Query: 62 RFDAQTGADREVQRILLELLNQMDGFDQTTNVKVIMATNRADTLDPALLRPGRLDRKIEF 121
R R++ ++L +MDG NV +I ATNR D +DPA+LRPGRLD+ I
Sbjct: 584 RGGNIGDGGGAADRVINQILTEMDGMSTKKNVFIIGATNRPDIIDPAILRPGRLDQLIYI 643
Query: 122 PLPDRRQKRLVFSTITAKMNLSDEVDLEDYVAR-PDRISGADINAICQEVIMATNRADTL 180
PLPD + + + K ++ +VDL D++A+ + SGAD+ ICQ R +++
Sbjct: 644 PLPDEKSRVAILKANLRKSPVAKDVDL-DFLAKMTNGFSGADLTEICQRACKLAIR-ESI 701
Query: 181 DPALLR-------PGRLDRKIEFPLPDRRQ 203
+ + R P ++ + + P+P+ R+
Sbjct: 702 ESEIRRERERQTNPSAMEVEEDDPVPEIRR 731
Score = 198 (74.8 bits), Expect = 3.0e-28, Sum P(2) = 3.0e-28
Identities = 56/182 (30%), Positives = 84/182 (46%)
Query: 2 LLCTSFDTELVTAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENSPXXXXXXXXXXXXTK 61
L+ + E F + G E + K GEG R +++ P
Sbjct: 253 LIARAVANETGAFFFLINGPEIMSKLAGEGESACRK--KISPAPPPLKTAGIFKSDDCFP 310
Query: 62 RFDAQTGADREVQRILLELLNQMDGFDQTTNVKVIMATNRADTLDPALLRPGRLDRKIEF 121
QT + E +RI+ +LL MDG Q +V V+ ATNR +++DPAL R GR DR+++
Sbjct: 311 --SPQTHGEVE-RRIVSQLLTLMDGLKQRAHVIVMAATNRPNSIDPALRRFGRFDREVDI 367
Query: 122 PLPDRRQKRLVFSTITAKMNLSDEVDLEDYVARPDRISGADINAICQEVIMATNRA--DT 179
+PD + + T M L+D+VDLE GAD+ A+C E + R D
Sbjct: 368 GIPDATGRLEILQIHTKNMKLADDVDLEQVANETHGHVGADLAALCSEAALQAIRKKMDL 427
Query: 180 LD 181
+D
Sbjct: 428 ID 429
Score = 191 (72.3 bits), Expect = 3.0e-28, Sum P(2) = 3.0e-28
Identities = 43/104 (41%), Positives = 64/104 (61%)
Query: 207 VFSTITAKMNFMLNIGNLQVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLVFST 266
V + I +M+ M N+ +I ATNR D +DPA+LRPGRLD+ I PLPD + + +
Sbjct: 598 VINQILTEMDGMSTKKNVFIIGATNRPDIIDPAILRPGRLDQLIYIPLPDEKSRVAILKA 657
Query: 267 ITAKMNLSDEVDLEDYVAR-PDRISGADINAICQEAGMHAVREN 309
K ++ +VDL D++A+ + SGAD+ ICQ A A+RE+
Sbjct: 658 NLRKSPVAKDVDL-DFLAKMTNGFSGADLTEICQRACKLAIRES 700
Score = 177 (67.4 bits), Expect = 2.4e-10, P = 2.4e-10
Identities = 40/121 (33%), Positives = 67/121 (55%)
Query: 196 FPLPDRR---QKRLVFSTITAKMNFMLNIGNLQVIMATNRADTLDPALLRPGRLDRKIEF 252
FP P ++R+V +T M+ + ++ V+ ATNR +++DPAL R GR DR+++
Sbjct: 309 FPSPQTHGEVERRIVSQLLTL-MDGLKQRAHVIVMAATNRPNSIDPALRRFGRFDREVDI 367
Query: 253 PLPDRRQKRLVFSTITAKMNLSDEVDLEDYVARPDRISGADINAICQEAGMHAVRENRYI 312
+PD + + T M L+D+VDLE GAD+ A+C EA + A+R+ +
Sbjct: 368 GIPDATGRLEILQIHTKNMKLADDVDLEQVANETHGHVGADLAALCSEAALQAIRKKMDL 427
Query: 313 V 313
+
Sbjct: 428 I 428
Score = 115 (45.5 bits), Expect = 2.7e-20, Sum P(2) = 2.7e-20
Identities = 21/35 (60%), Positives = 27/35 (77%)
Query: 170 VIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQK 204
+I ATNR D +DPA+LRPGRLD+ I PLPD + +
Sbjct: 617 IIGATNRPDIIDPAILRPGRLDQLIYIPLPDEKSR 651
>WB|WBGene00008053 [details] [associations]
symbol:cdc-48.2 species:6239 "Caenorhabditis elegans"
[GO:0016887 "ATPase activity" evidence=IEA;IDA] [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0006281 "DNA repair" evidence=IEA] [GO:0006310
"DNA recombination" evidence=IEA] [GO:0009378 "four-way junction
helicase activity" evidence=IEA] [GO:0009792 "embryo development
ending in birth or egg hatching" evidence=IGI;IMP] [GO:0040010
"positive regulation of growth rate" evidence=IMP] [GO:0040011
"locomotion" evidence=IMP] [GO:0002119 "nematode larval
development" evidence=IMP] [GO:0051301 "cell division"
evidence=IMP] [GO:0000910 "cytokinesis" evidence=IMP] [GO:0007126
"meiosis" evidence=IMP] [GO:0030968 "endoplasmic reticulum unfolded
protein response" evidence=IMP] [GO:0071712 "ER-associated
misfolded protein catabolic process" evidence=IGI] [GO:0034098
"Cdc48p-Npl4p-Ufd1p AAA ATPase complex" evidence=IPI] [GO:0005634
"nucleus" evidence=IDA] [GO:0006200 "ATP catabolic process"
evidence=IDA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 InterPro:IPR003338 Pfam:PF02359 GO:GO:0005524
GO:GO:0005634 GO:GO:0009792 GO:GO:0007126 GO:GO:0040010
GO:GO:0002119 GO:GO:0040011 EMBL:Z48334 GO:GO:0016887 GO:GO:0000910
eggNOG:COG0464 Gene3D:2.40.40.20 InterPro:IPR009010 SUPFAM:SSF50692
InterPro:IPR015415 Pfam:PF09336 GO:GO:0030968 HOGENOM:HOG000223224
KO:K13525 InterPro:IPR004201 PANTHER:PTHR23077:SF18 Pfam:PF02933
SMART:SM01072 SMART:SM01073 TIGRFAMs:TIGR01243 GO:GO:0034098
GeneTree:ENSGT00700000104534 GO:GO:0071712 EMBL:Z48045 PIR:T19879
RefSeq:NP_495705.1 ProteinModelPortal:P54812 SMR:P54812
DIP:DIP-26566N IntAct:P54812 MINT:MINT-1090535 STRING:P54812
PaxDb:P54812 PRIDE:P54812 EnsemblMetazoa:C41C4.8.1
EnsemblMetazoa:C41C4.8.2 EnsemblMetazoa:C41C4.8.3 GeneID:174309
KEGG:cel:CELE_C41C4.8 UCSC:C41C4.8.1 CTD:174309 WormBase:C41C4.8
InParanoid:P54812 OMA:ADRQDWE NextBio:883464 Uniprot:P54812
Length = 810
Score = 249 (92.7 bits), Expect = 5.2e-19, P = 5.2e-19
Identities = 59/167 (35%), Positives = 81/167 (48%)
Query: 2 LLCTSFDTELVTAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENSPXXXXXXXXXXXXTK 61
LL + E FI + G E + + GE VRDVF A+ +P
Sbjct: 531 LLAKAIANECQANFISIKGPELLTMWFGESEANVRDVFDKARAAAPCVLFFDELDSIAKA 590
Query: 62 RFDAQTGADREVQRILLELLNQMDGFDQTTNVKVIMATNRADTLDPALLRPGRLDRKIEF 121
R + A R++ ++L +MDG + NV +I ATNR D +DPA+LRPGRLD+ I
Sbjct: 591 RGGSVGDAGGAADRVINQVLTEMDGMNAKKNVFIIGATNRPDIIDPAVLRPGRLDQLIYI 650
Query: 122 PLPDRRQKRLVFSTITAKMNLSDEVDLEDYVARPDRISGADINAICQ 168
PLPD + +F K LS ++DL SGAD+ ICQ
Sbjct: 651 PLPDEASRLQIFKASLRKTPLSADLDLNFLAKNTVGFSGADLTEICQ 697
Score = 202 (76.2 bits), Expect = 4.4e-28, Sum P(2) = 4.4e-28
Identities = 53/168 (31%), Positives = 78/168 (46%)
Query: 2 LLCTSFDTELVTAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENSPXXXXXXXXXXXXTK 61
L+ + E F + G E + K GE +R F ++NSP K
Sbjct: 258 LIARAVANETGAFFFLINGPEIMSKMSGESESNLRKAFAECEKNSPAILFIDEIDAIAPK 317
Query: 62 RFDAQTGADREVQRILLELLNQMDGFDQTTNVKVIMATNRADTLDPALLRPGRLDRKIEF 121
R A ++ RI+ +LL MDG +V VI ATNR +++D AL R GR DR+I+
Sbjct: 318 REKAHGEVEK---RIVSQLLTLMDGLKTRAHVVVIAATNRPNSIDGALRRFGRFDREIDI 374
Query: 122 PLPDRRQKRLVFSTITAKMNLSDEVDLEDYVARPDRISGADINAICQE 169
+PD + + T M L ++VDLE GAD+ ++C E
Sbjct: 375 GIPDAVGRLEILRIHTKNMKLGEDVDLEQVANECHGFVGADLASLCSE 422
Score = 185 (70.2 bits), Expect = 4.4e-28, Sum P(2) = 4.4e-28
Identities = 42/103 (40%), Positives = 58/103 (56%)
Query: 207 VFSTITAKMNFMLNIGNLQVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLVFST 266
V + + +M+ M N+ +I ATNR D +DPA+LRPGRLD+ I PLPD + +F
Sbjct: 605 VINQVLTEMDGMNAKKNVFIIGATNRPDIIDPAVLRPGRLDQLIYIPLPDEASRLQIFKA 664
Query: 267 ITAKMNLSDEVDLEDYVARPDRISGADINAICQEAGMHAVREN 309
K LS ++DL SGAD+ ICQ A A+RE+
Sbjct: 665 SLRKTPLSADLDLNFLAKNTVGFSGADLTEICQRACKLAIRES 707
Score = 161 (61.7 bits), Expect = 1.5e-08, P = 1.5e-08
Identities = 37/111 (33%), Positives = 61/111 (54%)
Query: 203 QKRLVFSTITAKMNFMLNIGNLQVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRL 262
+KR+V +T M+ + ++ VI ATNR +++D AL R GR DR+I+ +PD +
Sbjct: 326 EKRIVSQLLTL-MDGLKTRAHVVVIAATNRPNSIDGALRRFGRFDREIDIGIPDAVGRLE 384
Query: 263 VFSTITAKMNLSDEVDLEDYVARPDRISGADINAICQEAGMHAVRENRYIV 313
+ T M L ++VDLE GAD+ ++C EA + +RE ++
Sbjct: 385 ILRIHTKNMKLGEDVDLEQVANECHGFVGADLASLCSEAAIQQIREKMELI 435
Score = 117 (46.2 bits), Expect = 5.6e-21, Sum P(2) = 5.6e-21
Identities = 23/45 (51%), Positives = 29/45 (64%)
Query: 170 VIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLVFSTITAK 214
+I ATNR D +DPA+LRPGRLD+ I PLPD + +F K
Sbjct: 624 IIGATNRPDIIDPAVLRPGRLDQLIYIPLPDEASRLQIFKASLRK 668
Score = 83 (34.3 bits), Expect = 2.1e-15, Sum P(2) = 2.1e-15
Identities = 17/31 (54%), Positives = 23/31 (74%)
Query: 170 VIMATNRADTLDPALLRPGRLDRKIEFPLPD 200
VI ATNR +++D AL R GR DR+I+ +PD
Sbjct: 348 VIAATNRPNSIDGALRRFGRFDREIDIGIPD 378
>UNIPROTKB|P54812 [details] [associations]
symbol:cdc-48.2 "Transitional endoplasmic reticulum ATPase
homolog 2" species:6239 "Caenorhabditis elegans" [GO:0042802
"identical protein binding" evidence=IPI] [GO:0005515 "protein
binding" evidence=IPI] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 InterPro:IPR003338 Pfam:PF02359 GO:GO:0005524
GO:GO:0005634 GO:GO:0009792 GO:GO:0007126 GO:GO:0040010
GO:GO:0002119 GO:GO:0040011 EMBL:Z48334 GO:GO:0016887 GO:GO:0000910
eggNOG:COG0464 Gene3D:2.40.40.20 InterPro:IPR009010 SUPFAM:SSF50692
InterPro:IPR015415 Pfam:PF09336 GO:GO:0030968 HOGENOM:HOG000223224
KO:K13525 InterPro:IPR004201 PANTHER:PTHR23077:SF18 Pfam:PF02933
SMART:SM01072 SMART:SM01073 TIGRFAMs:TIGR01243 GO:GO:0034098
GeneTree:ENSGT00700000104534 GO:GO:0071712 EMBL:Z48045 PIR:T19879
RefSeq:NP_495705.1 ProteinModelPortal:P54812 SMR:P54812
DIP:DIP-26566N IntAct:P54812 MINT:MINT-1090535 STRING:P54812
PaxDb:P54812 PRIDE:P54812 EnsemblMetazoa:C41C4.8.1
EnsemblMetazoa:C41C4.8.2 EnsemblMetazoa:C41C4.8.3 GeneID:174309
KEGG:cel:CELE_C41C4.8 UCSC:C41C4.8.1 CTD:174309 WormBase:C41C4.8
InParanoid:P54812 OMA:ADRQDWE NextBio:883464 Uniprot:P54812
Length = 810
Score = 249 (92.7 bits), Expect = 5.2e-19, P = 5.2e-19
Identities = 59/167 (35%), Positives = 81/167 (48%)
Query: 2 LLCTSFDTELVTAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENSPXXXXXXXXXXXXTK 61
LL + E FI + G E + + GE VRDVF A+ +P
Sbjct: 531 LLAKAIANECQANFISIKGPELLTMWFGESEANVRDVFDKARAAAPCVLFFDELDSIAKA 590
Query: 62 RFDAQTGADREVQRILLELLNQMDGFDQTTNVKVIMATNRADTLDPALLRPGRLDRKIEF 121
R + A R++ ++L +MDG + NV +I ATNR D +DPA+LRPGRLD+ I
Sbjct: 591 RGGSVGDAGGAADRVINQVLTEMDGMNAKKNVFIIGATNRPDIIDPAVLRPGRLDQLIYI 650
Query: 122 PLPDRRQKRLVFSTITAKMNLSDEVDLEDYVARPDRISGADINAICQ 168
PLPD + +F K LS ++DL SGAD+ ICQ
Sbjct: 651 PLPDEASRLQIFKASLRKTPLSADLDLNFLAKNTVGFSGADLTEICQ 697
Score = 202 (76.2 bits), Expect = 4.4e-28, Sum P(2) = 4.4e-28
Identities = 53/168 (31%), Positives = 78/168 (46%)
Query: 2 LLCTSFDTELVTAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENSPXXXXXXXXXXXXTK 61
L+ + E F + G E + K GE +R F ++NSP K
Sbjct: 258 LIARAVANETGAFFFLINGPEIMSKMSGESESNLRKAFAECEKNSPAILFIDEIDAIAPK 317
Query: 62 RFDAQTGADREVQRILLELLNQMDGFDQTTNVKVIMATNRADTLDPALLRPGRLDRKIEF 121
R A ++ RI+ +LL MDG +V VI ATNR +++D AL R GR DR+I+
Sbjct: 318 REKAHGEVEK---RIVSQLLTLMDGLKTRAHVVVIAATNRPNSIDGALRRFGRFDREIDI 374
Query: 122 PLPDRRQKRLVFSTITAKMNLSDEVDLEDYVARPDRISGADINAICQE 169
+PD + + T M L ++VDLE GAD+ ++C E
Sbjct: 375 GIPDAVGRLEILRIHTKNMKLGEDVDLEQVANECHGFVGADLASLCSE 422
Score = 185 (70.2 bits), Expect = 4.4e-28, Sum P(2) = 4.4e-28
Identities = 42/103 (40%), Positives = 58/103 (56%)
Query: 207 VFSTITAKMNFMLNIGNLQVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLVFST 266
V + + +M+ M N+ +I ATNR D +DPA+LRPGRLD+ I PLPD + +F
Sbjct: 605 VINQVLTEMDGMNAKKNVFIIGATNRPDIIDPAVLRPGRLDQLIYIPLPDEASRLQIFKA 664
Query: 267 ITAKMNLSDEVDLEDYVARPDRISGADINAICQEAGMHAVREN 309
K LS ++DL SGAD+ ICQ A A+RE+
Sbjct: 665 SLRKTPLSADLDLNFLAKNTVGFSGADLTEICQRACKLAIRES 707
Score = 161 (61.7 bits), Expect = 1.5e-08, P = 1.5e-08
Identities = 37/111 (33%), Positives = 61/111 (54%)
Query: 203 QKRLVFSTITAKMNFMLNIGNLQVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRL 262
+KR+V +T M+ + ++ VI ATNR +++D AL R GR DR+I+ +PD +
Sbjct: 326 EKRIVSQLLTL-MDGLKTRAHVVVIAATNRPNSIDGALRRFGRFDREIDIGIPDAVGRLE 384
Query: 263 VFSTITAKMNLSDEVDLEDYVARPDRISGADINAICQEAGMHAVRENRYIV 313
+ T M L ++VDLE GAD+ ++C EA + +RE ++
Sbjct: 385 ILRIHTKNMKLGEDVDLEQVANECHGFVGADLASLCSEAAIQQIREKMELI 435
Score = 117 (46.2 bits), Expect = 5.6e-21, Sum P(2) = 5.6e-21
Identities = 23/45 (51%), Positives = 29/45 (64%)
Query: 170 VIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLVFSTITAK 214
+I ATNR D +DPA+LRPGRLD+ I PLPD + +F K
Sbjct: 624 IIGATNRPDIIDPAVLRPGRLDQLIYIPLPDEASRLQIFKASLRK 668
Score = 83 (34.3 bits), Expect = 2.1e-15, Sum P(2) = 2.1e-15
Identities = 17/31 (54%), Positives = 23/31 (74%)
Query: 170 VIMATNRADTLDPALLRPGRLDRKIEFPLPD 200
VI ATNR +++D AL R GR DR+I+ +PD
Sbjct: 348 VIAATNRPNSIDGALRRFGRFDREIDIGIPD 378
>UNIPROTKB|E1BT72 [details] [associations]
symbol:NVL "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005730
"nucleolus" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0016235 "aggresome" evidence=IEA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005737 GO:GO:0005730
GO:GO:0016235 GO:GO:0017111 OMA:NDMTLKE
GeneTree:ENSGT00570000079239 EMBL:AADN02012163 IPI:IPI00584236
Ensembl:ENSGALT00000015173 ArrayExpress:E1BT72 Uniprot:E1BT72
Length = 858
Score = 248 (92.4 bits), Expect = 7.9e-19, P = 7.9e-19
Identities = 62/186 (33%), Positives = 97/186 (52%)
Query: 2 LLCTSFDTELVTAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENSPXXXXXXXXXXXXTK 61
LL + E FI V G E + Y+GE R VR VF+ A+ ++P +
Sbjct: 630 LLAKAVANESGLNFISVKGPELLNMYVGESERAVRQVFQRARNSAPCVIFFDEVDALCPR 689
Query: 62 RFDAQTGADREVQRILLELLNQMDGFDQTTNVKVIMATNRADTLDPALLRPGRLDRKIEF 121
R D ++GA R++ +LL +MDG + V ++ ATNR D +DPA+LRPGRLD+ +
Sbjct: 690 RSDRESGAS---VRVVNQLLTEMDGLENRQQVFIMAATNRPDIIDPAILRPGRLDKTLYV 746
Query: 122 PLPDRRQKRLVFSTIT---AKMNLSDEVDLED--YVARPDRISGADINAICQEVIMATNR 176
LP + + TIT + L +V+LE+ Y + D +GAD++A+ +E + R
Sbjct: 747 GLPPPEDRLAILKTITKDGTRPPLDTDVNLEEIAYSQQCDCYTGADLSALVREASICALR 806
Query: 177 ADTLDP 182
+ P
Sbjct: 807 QEMALP 812
Score = 216 (81.1 bits), Expect = 4.4e-28, Sum P(2) = 4.4e-28
Identities = 57/176 (32%), Positives = 81/176 (46%)
Query: 2 LLCTSFDTELVTAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENSPXXXXXXXXXXXXTK 61
LL + EL ++V +E V GE + +R++F A N+P K
Sbjct: 308 LLAQAIAGELELPMLKVAATEMVSGVSGESEQKLRELFDQAVLNAPCVLFIDEIDAITPK 367
Query: 62 RFDAQTGADREVQRILLELLNQMDGFDQTTNVKVIMATNRADTLDPALLRPGRLDRKIEF 121
R A +R + LL L+ ++ T V VI ATNR D+LDPAL R GR DR+I
Sbjct: 368 REVASKDMERRIVAQLLTCLDDLNNVAATAQVLVIGATNRPDSLDPALRRAGRFDREICL 427
Query: 122 PLPDRRQKRLVFSTITAKMNLSDEVDLEDYVARPDRISGADINAICQEVIMAT-NR 176
+PD + + T+ K+ L D GAD+ A+C+E M T NR
Sbjct: 428 GIPDEAAREKILQTLCRKLKLPGSFDFLHLAHLTPGYVGADLMALCREAAMCTVNR 483
Score = 177 (67.4 bits), Expect = 2.6e-10, P = 2.6e-10
Identities = 49/161 (30%), Positives = 78/161 (48%)
Query: 203 QKRLVFSTITA--KMNFMLNIGNLQVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQK 260
++R+V +T +N + + VI ATNR D+LDPAL R GR DR+I +PD +
Sbjct: 376 ERRIVAQLLTCLDDLNNVAATAQVLVIGATNRPDSLDPALRRAGRFDREICLGIPDEAAR 435
Query: 261 RLVFSTITAKMNLSDEVDLEDYVARPDRISGADINAICQEAGMHAVRENRYIVLPKDFEK 320
+ T+ K+ L D GAD+ A+C+EA M V NR ++ ++ ++
Sbjct: 436 EKILQTLCRKLKLPGSFDFLHLAHLTPGYVGADLMALCREAAMCTV--NRVLIKSEEQQR 493
Query: 321 GYKKCAGMHAVRENRYIVLPKDFEKGYKNNTKKDESEHEFY 361
Y + AG + E+ I E+ K K+E + Y
Sbjct: 494 KYVQ-AGGNTAEESVGIETEIPVEENTKQLPSKEELQRLLY 533
Score = 169 (64.5 bits), Expect = 4.4e-28, Sum P(2) = 4.4e-28
Identities = 48/145 (33%), Positives = 79/145 (54%)
Query: 207 VFSTITAKMNFMLNIGNLQVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLVFST 266
V + + +M+ + N + ++ ATNR D +DPA+LRPGRLD+ + LP + + T
Sbjct: 701 VVNQLLTEMDGLENRQQVFIMAATNRPDIIDPAILRPGRLDKTLYVGLPPPEDRLAILKT 760
Query: 267 IT---AKMNLSDEVDLED--YVARPDRISGADINAICQEAGMHAVRENRYIVLPKDF-EK 320
IT + L +V+LE+ Y + D +GAD++A+ +EA + A+R+ + K EK
Sbjct: 761 ITKDGTRPPLDTDVNLEEIAYSQQCDCYTGADLSALVREASICALRQEMALPTTKSKKEK 820
Query: 321 GYKKCAGMH---AVRENRYIVLPKD 342
G K + H A R+ + V KD
Sbjct: 821 GEIKISRKHFEEAFRKVKSSVSKKD 845
Score = 107 (42.7 bits), Expect = 1.3e-21, Sum P(2) = 1.3e-21
Identities = 20/43 (46%), Positives = 28/43 (65%)
Query: 170 VIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLVFSTIT 212
++ ATNR D +DPA+LRPGRLD+ + LP + + TIT
Sbjct: 720 IMAATNRPDIIDPAILRPGRLDKTLYVGLPPPEDRLAILKTIT 762
Score = 107 (42.7 bits), Expect = 5.6e-16, Sum P(2) = 5.6e-16
Identities = 22/46 (47%), Positives = 29/46 (63%)
Query: 170 VIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLVFSTITAKM 215
VI ATNR D+LDPAL R GR DR+I +PD + + T+ K+
Sbjct: 401 VIGATNRPDSLDPALRRAGRFDREICLGIPDEAAREKILQTLCRKL 446
Score = 37 (18.1 bits), Expect = 2.6e-14, Sum P(2) = 2.6e-14
Identities = 11/25 (44%), Positives = 13/25 (52%)
Query: 275 DEVDLEDYVARPDRISGADINAICQ 299
DEVD R DR SGA + + Q
Sbjct: 681 DEVDAL-CPRRSDRESGASVRVVNQ 704
>MGI|MGI:1927170 [details] [associations]
symbol:Spata5 "spermatogenesis associated 5" species:10090
"Mus musculus" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0005739 "mitochondrion" evidence=IEA] [GO:0007275
"multicellular organismal development" evidence=IEA] [GO:0007283
"spermatogenesis" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0030154
"cell differentiation" evidence=IEA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 InterPro:IPR003338 MGI:MGI:1927170 GO:GO:0007275
GO:GO:0005739 GO:GO:0005524 GO:GO:0030154 GO:GO:0007283
eggNOG:COG0464 HOGENOM:HOG000223225 KO:K14575
GeneTree:ENSGT00700000104502 GO:GO:0017111 HSSP:Q9WZ49
Gene3D:2.40.40.20 InterPro:IPR009010 SUPFAM:SSF50692 SMART:SM01073
CTD:166378 HOVERGEN:HBG108504 OMA:NDIRPSA OrthoDB:EOG43FGWF
EMBL:AF049099 EMBL:AK011111 EMBL:AK144998 EMBL:AL669927
EMBL:AL627074 EMBL:AL645968 IPI:IPI00649667 RefSeq:NP_001156983.1
RefSeq:NP_067318.2 UniGene:Mm.172679 ProteinModelPortal:Q3UMC0
SMR:Q3UMC0 PhosphoSite:Q3UMC0 PaxDb:Q3UMC0 PRIDE:Q3UMC0
Ensembl:ENSMUST00000029277 Ensembl:ENSMUST00000108112 GeneID:57815
KEGG:mmu:57815 UCSC:uc008pau.2 InParanoid:Q3UMC0 NextBio:314006
Bgee:Q3UMC0 Genevestigator:Q3UMC0 Uniprot:Q3UMC0
Length = 893
Score = 309 (113.8 bits), Expect = 1.9e-26, P = 1.9e-26
Identities = 63/158 (39%), Positives = 94/158 (59%)
Query: 15 FIRVVGSEFVQKYLGEGPRMVRDVFRLAKENSPXXXXXXXXXXXXTKRFDAQTGADREVQ 74
F+ + G E + KY+GE R VR++FR A+ +P +R + +GA
Sbjct: 689 FLAIKGPELMNKYVGESERAVREIFRKARAVAPSIIFFDELDALAVER-GSSSGAGNVAD 747
Query: 75 RILLELLNQMDGFDQTTNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLVFS 134
R+L +LL +MDG +Q NV V+ ATNR D +D AL+RPGR+DR I PLPD +R + +
Sbjct: 748 RVLAQLLTEMDGIEQLKNVTVLAATNRPDRIDKALMRPGRIDRIIYVPLPDAATRREILN 807
Query: 135 TITAKMNLSDEVDLEDYVARPDRISGADINAICQEVIM 172
M +S+EVDL++ V + D SGA+I A+C+E +
Sbjct: 808 LQFHSMPISNEVDLDELVLQTDTYSGAEIIAVCKEAAL 845
Score = 211 (79.3 bits), Expect = 4.9e-28, Sum P(2) = 4.9e-28
Identities = 43/103 (41%), Positives = 67/103 (65%)
Query: 207 VFSTITAKMNFMLNIGNLQVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLVFST 266
V + + +M+ + + N+ V+ ATNR D +D AL+RPGR+DR I PLPD +R + +
Sbjct: 749 VLAQLLTEMDGIEQLKNVTVLAATNRPDRIDKALMRPGRIDRIIYVPLPDAATRREILNL 808
Query: 267 ITAKMNLSDEVDLEDYVARPDRISGADINAICQEAGMHAVREN 309
M +S+EVDL++ V + D SGA+I A+C+EA + A+ EN
Sbjct: 809 QFHSMPISNEVDLDELVLQTDTYSGAEIIAVCKEAALLALEEN 851
Score = 175 (66.7 bits), Expect = 4.9e-28, Sum P(2) = 4.9e-28
Identities = 50/176 (28%), Positives = 80/176 (45%)
Query: 12 VTAFIRVV-GSEFVQKYLGEGPRMVRDVFRLAKENSPXXXXXXXXXXXXTKRFDAQTGAD 70
V A++ V+ G E + K+ GE +R +F A P KR AQ+ +
Sbjct: 411 VGAYVSVINGPEIISKFYGETEARLRQIFAEATLRHPSIIFIDELDALCPKREGAQSEVE 470
Query: 71 REVQRILLELLNQMDGFDQTTNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKR 130
+ V LL L++ + V V+ ATNR LD AL RPGR D++IE +P+ + +
Sbjct: 471 KRVVASLLTLMDGIGSEGSEGRVLVLGATNRPQALDAALRRPGRFDKEIEIGIPNAQDRL 530
Query: 131 LVFSTITAKM-NLSDEVDLEDYVARPDRISGADINAICQEV-IMATNRADTLDPAL 184
+ + ++ +L + +L GAD+ A+C E + A R P L
Sbjct: 531 DILQKLLRRVPHLLTKAELLRLANNAHGYVGADLKALCNEAGLHALRRVLRKQPNL 586
Score = 156 (60.0 bits), Expect = 6.1e-08, P = 6.1e-08
Identities = 44/138 (31%), Positives = 71/138 (51%)
Query: 203 QKRLVFSTITAK--MNFMLNIGNLQVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQK 260
+KR+V S +T + + G + V+ ATNR LD AL RPGR D++IE +P+ + +
Sbjct: 470 EKRVVASLLTLMDGIGSEGSEGRVLVLGATNRPQALDAALRRPGRFDKEIEIGIPNAQDR 529
Query: 261 RLVFSTITAKM-NLSDEVDLEDYVARPDRISGADINAICQEAGMHAVRENRYIVLPKDFE 319
+ + ++ +L + +L GAD+ A+C EAG+HA+R VL K
Sbjct: 530 LDILQKLLRRVPHLLTKAELLRLANNAHGYVGADLKALCNEAGLHALRR----VLRKQPN 585
Query: 320 KGYKKCAGMHAVRENRYI 337
K AGM + N ++
Sbjct: 586 LPDSKVAGMVKITLNDFL 603
Score = 109 (43.4 bits), Expect = 7.8e-17, Sum P(2) = 7.8e-17
Identities = 21/40 (52%), Positives = 28/40 (70%)
Query: 170 VIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLVFS 209
V+ ATNR D +D AL+RPGR+DR I PLPD +R + +
Sbjct: 768 VLAATNRPDRIDKALMRPGRIDRIIYVPLPDAATRREILN 807
>ZFIN|ZDB-GENE-040426-2871 [details] [associations]
symbol:nvl "nuclear VCP-like" species:7955 "Danio
rerio" [GO:0000166 "nucleotide binding" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
ZFIN:ZDB-GENE-040426-2871 GO:GO:0005524 HSSP:Q01853 GO:GO:0017111
KO:K14571 CTD:4931 HOVERGEN:HBG001226 EMBL:BC044464 IPI:IPI00503965
RefSeq:NP_998649.1 UniGene:Dr.2359 ProteinModelPortal:Q803I9
STRING:Q803I9 PRIDE:Q803I9 GeneID:406805 KEGG:dre:406805
NextBio:20818314 ArrayExpress:Q803I9 Bgee:Q803I9 Uniprot:Q803I9
Length = 796
Score = 254 (94.5 bits), Expect = 6.1e-20, P = 6.1e-20
Identities = 61/174 (35%), Positives = 94/174 (54%)
Query: 15 FIRVVGSEFVQKYLGEGPRMVRDVFRLAKENSPXXXXXXXXXXXXTKRFDAQTGADREVQ 74
FI V G E + Y+GE R VR VF+ + ++P +R + ++GA
Sbjct: 582 FISVKGPELLNMYVGESERAVRQVFQRGRNSAPCVIFFDEIDALCPRRSEHESGAS---V 638
Query: 75 RILLELLNQMDGFDQTTNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLVFS 134
R++ +LL +MDG + V ++ ATNR D +DPA+LRPGRLD+ + LP + + +
Sbjct: 639 RVVNQLLTEMDGMENRRQVFIMAATNRPDIIDPAVLRPGRLDKTLYVGLPPAADRHAILN 698
Query: 135 TIT---AKMNLSDEVDLEDYV--ARPDRISGADINAICQEVIMATNRADTLDPA 183
TIT K L +V LE+ AR + +GAD++A+ +E + R LDPA
Sbjct: 699 TITKGGTKPQLDSDVSLEEIAHDARCETFTGADLSALVREACVNALRVH-LDPA 751
Score = 215 (80.7 bits), Expect = 5.9e-28, Sum P(2) = 5.9e-28
Identities = 58/184 (31%), Positives = 90/184 (48%)
Query: 2 LLCTSFDTELVTAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENSPXXXXXXXXXXXXTK 61
LL + E +++ E V GE + +R++F A ++P K
Sbjct: 275 LLAQAVAGETALPLLKISAPELVSGVSGESEQKLRELFEQAISSAPCILFIDEIDAITPK 334
Query: 62 RFDAQTGADREVQRILLELLNQMDGFDQTTNVKVIMATNRADTLDPALLRPGRLDRKIEF 121
R A +R + LL ++ ++ + V VI ATNR D+LDPAL R GR DR+I
Sbjct: 335 RETASKDMERRIVAQLLTCMDDLNSMLEPAQVLVIGATNRPDSLDPALRRAGRFDREICL 394
Query: 122 PLPDRRQKRLVFSTITAKMNLSDEVDLEDYVAR--PDRISGADINAICQEVIM-ATNRAD 178
+PD + + T+ K+ L D+ D ++AR P + GAD+ A+C+E M A NR
Sbjct: 395 GIPDEGARMKILKTLCRKIRLPDDFDFR-HLARLTPGYV-GADLMALCREAAMNAVNRI- 451
Query: 179 TLDP 182
L+P
Sbjct: 452 LLEP 455
Score = 192 (72.6 bits), Expect = 4.8e-12, P = 4.8e-12
Identities = 58/171 (33%), Positives = 92/171 (53%)
Query: 152 VARPDRISGADINAICQEVIMATNRADTLDPALLRPGRLDR---KIEFPLPDRRQKRLVF 208
++ P+ +SG + Q++ +A + P +L +D K E D ++R+V
Sbjct: 291 ISAPELVSGVSGESE-QKLRELFEQAISSAPCILFIDEIDAITPKRETASKDM-ERRIVA 348
Query: 209 STITAK--MNFMLNIGNLQVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLVFST 266
+T +N ML + VI ATNR D+LDPAL R GR DR+I +PD + + T
Sbjct: 349 QLLTCMDDLNSMLEPAQVLVIGATNRPDSLDPALRRAGRFDREICLGIPDEGARMKILKT 408
Query: 267 ITAKMNLSDEVDLEDYVAR--PDRISGADINAICQEAGMHAVRENRYIVLP 315
+ K+ L D+ D ++AR P + GAD+ A+C+EA M+AV NR ++ P
Sbjct: 409 LCRKIRLPDDFDFR-HLARLTPGYV-GADLMALCREAAMNAV--NRILLEP 455
Score = 168 (64.2 bits), Expect = 5.9e-28, Sum P(2) = 5.9e-28
Identities = 39/106 (36%), Positives = 64/106 (60%)
Query: 207 VFSTITAKMNFMLNIGNLQVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLVFST 266
V + + +M+ M N + ++ ATNR D +DPA+LRPGRLD+ + LP + + +T
Sbjct: 640 VVNQLLTEMDGMENRRQVFIMAATNRPDIIDPAVLRPGRLDKTLYVGLPPAADRHAILNT 699
Query: 267 IT---AKMNLSDEVDLEDYV--ARPDRISGADINAICQEAGMHAVR 307
IT K L +V LE+ AR + +GAD++A+ +EA ++A+R
Sbjct: 700 ITKGGTKPQLDSDVSLEEIAHDARCETFTGADLSALVREACVNALR 745
Score = 109 (43.4 bits), Expect = 8.7e-22, Sum P(2) = 8.7e-22
Identities = 20/43 (46%), Positives = 29/43 (67%)
Query: 170 VIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLVFSTIT 212
++ ATNR D +DPA+LRPGRLD+ + LP + + +TIT
Sbjct: 659 IMAATNRPDIIDPAVLRPGRLDKTLYVGLPPAADRHAILNTIT 701
>TAIR|locus:2103555 [details] [associations]
symbol:CIP111 "Cam interacting protein 111" species:3702
"Arabidopsis thaliana" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=ISM] [GO:0016887 "ATPase activity" evidence=ISS]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
[GO:0005516 "calmodulin binding" evidence=IDA;TAS] [GO:0009535
"chloroplast thylakoid membrane" evidence=IDA] [GO:0009507
"chloroplast" evidence=IDA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 EMBL:CP002686 GO:GO:0016887 GO:GO:0005516 HSSP:Q01853
eggNOG:COG0464 EMBL:AL390921 GO:GO:0009535 HOGENOM:HOG000223224
EMBL:AF217546 EMBL:AF217547 IPI:IPI00534707 PIR:T50927 PIR:T51257
RefSeq:NP_191228.1 UniGene:At.9830 ProteinModelPortal:Q9LET7
SMR:Q9LET7 IntAct:Q9LET7 STRING:Q9LET7 PRIDE:Q9LET7
EnsemblPlants:AT3G56690.1 GeneID:824836 KEGG:ath:AT3G56690
GeneFarm:2042 TAIR:At3g56690 InParanoid:Q9LET7 OMA:SEAKLNF
PhylomeDB:Q9LET7 ProtClustDB:CLSN2684205 Genevestigator:Q9LET7
Uniprot:Q9LET7
Length = 1022
Score = 234 (87.4 bits), Expect = 9.3e-28, Sum P(2) = 9.3e-28
Identities = 56/156 (35%), Positives = 79/156 (50%)
Query: 15 FIRVVGSEFVQKYLGEGPRMVRDVFRLAKENSPXXXXXXXXXXXXTKRFDAQTGADREVQ 74
F V G E + +YLGE + + +VFR A +P R + G + Q
Sbjct: 446 FFSVNGPEIISQYLGESEKALDEVFRSASNATPAVVFIDDLDAIAPAR---KEGGEELSQ 502
Query: 75 RILLELLNQMDGFDQTTNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLVFS 134
R++ LLN MDG +T V VI ATNR D+++PAL RPGRLDR+IE +P Q+ +
Sbjct: 503 RMVATLLNLMDGISRTDGVVVIAATNRPDSIEPALRRPGRLDREIEIGVPSSTQRSDILH 562
Query: 135 TITAKMNLS-DEVDLEDYVARPDRISGADINAICQE 169
I M S + +E GAD++A+C E
Sbjct: 563 IILRGMRHSLSNIQVEQLAMATHGFVGADLSALCCE 598
Score = 224 (83.9 bits), Expect = 1.3e-15, P = 1.3e-15
Identities = 53/172 (30%), Positives = 84/172 (48%)
Query: 2 LLCTSFDTELVTAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENSPXXXXXXXXXXXXTK 61
L+ + +E F+ V G E K++GE + VR +F A+ N+P +
Sbjct: 773 LMARAVASEAKLNFLAVKGPELFSKWVGESEKAVRSLFAKARANAPSIIFFDEIDSLASI 832
Query: 62 RFDAQTGADREVQRILLELLNQMDGFDQTTNVKVIMATNRADTLDPALLRPGRLDRKIEF 121
R G R++ +LL ++DG Q V VI ATNR D +D ALLRPGR DR +
Sbjct: 833 RGKENDGVSVS-DRVMSQLLVELDGLHQRVGVTVIAATNRPDKIDSALLRPGRFDRLLYV 891
Query: 122 PLPDRRQKRLVFSTITAKMNLSDEVDLEDYVARPDRISGADINAICQEVIMA 173
P+ + + K+ S ++ L++ + +GADI+ IC+E +A
Sbjct: 892 GPPNETDREAILKIHLRKIPCSSDICLKELASITKGYTGADISLICREAAIA 943
Score = 151 (58.2 bits), Expect = 2.6e-07, P = 2.6e-07
Identities = 37/107 (34%), Positives = 58/107 (54%)
Query: 204 KRLVFSTITAKMNFMLNIGNLQVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLV 263
+R+V +T+ M+ + + VI ATNR D+++PAL RPGRLDR+IE +P Q+ +
Sbjct: 502 QRMV-ATLLNLMDGISRTDGVVVIAATNRPDSIEPALRRPGRLDREIEIGVPSSTQRSDI 560
Query: 264 FSTITAKMNLS-DEVDLEDYVARPDRISGADINAICQEAGMHAVREN 309
I M S + +E GAD++A+C EA +R +
Sbjct: 561 LHIILRGMRHSLSNIQVEQLAMATHGFVGADLSALCCEAAFVCLRRH 607
Score = 145 (56.1 bits), Expect = 9.3e-28, Sum P(2) = 9.3e-28
Identities = 33/103 (32%), Positives = 56/103 (54%)
Query: 207 VFSTITAKMNFMLNIGNLQVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLVFST 266
V S + +++ + + VI ATNR D +D ALLRPGR DR + P+ + +
Sbjct: 846 VMSQLLVELDGLHQRVGVTVIAATNRPDKIDSALLRPGRFDRLLYVGPPNETDREAILKI 905
Query: 267 ITAKMNLSDEVDLEDYVARPDRISGADINAICQEAGMHAVREN 309
K+ S ++ L++ + +GADI+ IC+EA + A+ E+
Sbjct: 906 HLRKIPCSSDICLKELASITKGYTGADISLICREAAIAALEES 948
Score = 125 (49.1 bits), Expect = 0.00019, P = 0.00019
Identities = 30/63 (47%), Positives = 39/63 (61%)
Query: 170 VIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLVFSTITAKMNFML-NIGNLQVIM 228
VI ATNR D+++PAL RPGRLDR+IE +P Q+ + I M L NI Q+ M
Sbjct: 523 VIAATNRPDSIEPALRRPGRLDREIEIGVPSSTQRSDILHIILRGMRHSLSNIQVEQLAM 582
Query: 229 ATN 231
AT+
Sbjct: 583 ATH 585
Score = 87 (35.7 bits), Expect = 1.1e-21, Sum P(2) = 1.1e-21
Identities = 18/38 (47%), Positives = 23/38 (60%)
Query: 170 VIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLV 207
VI ATNR D +D ALLRPGR DR + P+ + +
Sbjct: 865 VIAATNRPDKIDSALLRPGRFDRLLYVGPPNETDREAI 902
>GENEDB_PFALCIPARUM|PFF0940c [details] [associations]
symbol:PFF0940c "cell division cycle protein 48
homologue, putative" species:5833 "Plasmodium falciparum"
[GO:0051726 "regulation of cell cycle" evidence=ISS] [GO:0016887
"ATPase activity" evidence=ISS] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005938
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 InterPro:IPR003338
Pfam:PF02359 GO:GO:0005524 GO:GO:0051301 GO:GO:0051726
GO:GO:0017111 Gene3D:2.40.40.20 InterPro:IPR009010 SUPFAM:SSF50692
HOGENOM:HOG000223224 KO:K13525 InterPro:IPR004201
PANTHER:PTHR23077:SF18 Pfam:PF02933 SMART:SM01072 SMART:SM01073
TIGRFAMs:TIGR01243 OMA:AYRPIHK EMBL:AL844505 RefSeq:XP_966179.2
ProteinModelPortal:C6KT34 PRIDE:C6KT34
EnsemblProtists:PFF0940c:mRNA GeneID:3885942 KEGG:pfa:PFF0940c
EuPathDB:PlasmoDB:PF3D7_0619400 ProtClustDB:CLSZ2429060
Uniprot:C6KT34
Length = 828
Score = 224 (83.9 bits), Expect = 9.8e-16, P = 9.8e-16
Identities = 56/180 (31%), Positives = 87/180 (48%)
Query: 2 LLCTSFDTELVTAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENSPXXXXXXXXXXXXTK 61
LL + +E F+ + G E + + GE VR+VF A+ +P T+
Sbjct: 529 LLAKAVASECSANFVSIKGPELLTMWFGESEANVREVFDKARAAAPCVLFFDELDSIGTQ 588
Query: 62 RFDAQTGADREVQRILLELLNQMDGFDQTTNVKVIMATNRADTLDPALLRPGRLDRKIEF 121
R + R++ +LL ++DG N+ I ATNR + LD ALLRPGRLD+ I
Sbjct: 589 RGSSLGDGSGAGDRVMNQLLTEIDGVGPKKNLFFIGATNRPELLDEALLRPGRLDQLIYI 648
Query: 122 PLPDRRQKRLVFSTITAKMNLSDEVDLEDYVARPDRISGADINAICQEVIMATNRADTLD 181
PLPD + + + I K +++ V ++ + SGAD+ +CQ A R D +D
Sbjct: 649 PLPDLGARISILTAILRKCPVAENVPIDFLAQKTAGFSGADLAELCQRAARAAIR-DAID 707
Score = 218 (81.8 bits), Expect = 2.4e-27, Sum P(2) = 2.4e-27
Identities = 57/180 (31%), Positives = 88/180 (48%)
Query: 15 FIRVVGSEFVQKYLGEGPRMVRDVFRLAKENSPXXXXXXXXXXXXTKRFDAQTGADREVQ 74
F + G E + K GE +R F A++NSP KR +T + E +
Sbjct: 269 FFLINGPEVMSKMAGEAEANLRRAFEEAEKNSPAIIFIDEIDSIAPKR--EKTNGEVE-R 325
Query: 75 RILLELLNQMDGFDQTTNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLVFS 134
R++ +LL MDG V VI ATNR +++DPAL R GR DR+I+ +PD + +
Sbjct: 326 RVVSQLLTLMDGIKSRGQVVVIAATNRQNSIDPALRRFGRFDREIDIGVPDDNGRFEILR 385
Query: 135 TITAKMNLSDEVDLEDYVARPDRISGADINAICQEVIMATNRADTLDPALLRPGRLDRKI 194
T M LS +V LE+ + GAD+ +C E + R + +D L +D+++
Sbjct: 386 IHTKNMKLSPDVKLEELASNTHGFVGADLAQLCTEAALTCIR-EKMDVIDLEDEIIDKEV 444
Score = 170 (64.9 bits), Expect = 1.5e-09, P = 1.5e-09
Identities = 38/110 (34%), Positives = 61/110 (55%)
Query: 204 KRLVFSTITAKMNFMLNIGNLQVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLV 263
+R V S + M+ + + G + VI ATNR +++DPAL R GR DR+I+ +PD + +
Sbjct: 324 ERRVVSQLLTLMDGIKSRGQVVVIAATNRQNSIDPALRRFGRFDREIDIGVPDDNGRFEI 383
Query: 264 FSTITAKMNLSDEVDLEDYVARPDRISGADINAICQEAGMHAVRENRYIV 313
T M LS +V LE+ + GAD+ +C EA + +RE ++
Sbjct: 384 LRIHTKNMKLSPDVKLEELASNTHGFVGADLAQLCTEAALTCIREKMDVI 433
Score = 159 (61.0 bits), Expect = 2.4e-27, Sum P(2) = 2.4e-27
Identities = 35/86 (40%), Positives = 50/86 (58%)
Query: 223 NLQVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLVFSTITAKMNLSDEVDLEDY 282
NL I ATNR + LD ALLRPGRLD+ I PLPD + + + I K +++ V ++
Sbjct: 619 NLFFIGATNRPELLDEALLRPGRLDQLIYIPLPDLGARISILTAILRKCPVAENVPIDFL 678
Query: 283 VARPDRISGADINAICQEAGMHAVRE 308
+ SGAD+ +CQ A A+R+
Sbjct: 679 AQKTAGFSGADLAELCQRAARAAIRD 704
Score = 91 (37.1 bits), Expect = 3.3e-13, Sum P(2) = 3.3e-13
Identities = 18/31 (58%), Positives = 24/31 (77%)
Query: 170 VIMATNRADTLDPALLRPGRLDRKIEFPLPD 200
VI ATNR +++DPAL R GR DR+I+ +PD
Sbjct: 346 VIAATNRQNSIDPALRRFGRFDREIDIGVPD 376
>UNIPROTKB|C6KT34 [details] [associations]
symbol:PFF0940c "Cell division cycle protein 48 homologue,
putative" species:36329 "Plasmodium falciparum 3D7" [GO:0051726
"regulation of cell cycle" evidence=ISS] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005938
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 InterPro:IPR003338
Pfam:PF02359 GO:GO:0005524 GO:GO:0051301 GO:GO:0051726
GO:GO:0017111 Gene3D:2.40.40.20 InterPro:IPR009010 SUPFAM:SSF50692
HOGENOM:HOG000223224 KO:K13525 InterPro:IPR004201
PANTHER:PTHR23077:SF18 Pfam:PF02933 SMART:SM01072 SMART:SM01073
TIGRFAMs:TIGR01243 OMA:AYRPIHK EMBL:AL844505 RefSeq:XP_966179.2
ProteinModelPortal:C6KT34 PRIDE:C6KT34
EnsemblProtists:PFF0940c:mRNA GeneID:3885942 KEGG:pfa:PFF0940c
EuPathDB:PlasmoDB:PF3D7_0619400 ProtClustDB:CLSZ2429060
Uniprot:C6KT34
Length = 828
Score = 224 (83.9 bits), Expect = 9.8e-16, P = 9.8e-16
Identities = 56/180 (31%), Positives = 87/180 (48%)
Query: 2 LLCTSFDTELVTAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENSPXXXXXXXXXXXXTK 61
LL + +E F+ + G E + + GE VR+VF A+ +P T+
Sbjct: 529 LLAKAVASECSANFVSIKGPELLTMWFGESEANVREVFDKARAAAPCVLFFDELDSIGTQ 588
Query: 62 RFDAQTGADREVQRILLELLNQMDGFDQTTNVKVIMATNRADTLDPALLRPGRLDRKIEF 121
R + R++ +LL ++DG N+ I ATNR + LD ALLRPGRLD+ I
Sbjct: 589 RGSSLGDGSGAGDRVMNQLLTEIDGVGPKKNLFFIGATNRPELLDEALLRPGRLDQLIYI 648
Query: 122 PLPDRRQKRLVFSTITAKMNLSDEVDLEDYVARPDRISGADINAICQEVIMATNRADTLD 181
PLPD + + + I K +++ V ++ + SGAD+ +CQ A R D +D
Sbjct: 649 PLPDLGARISILTAILRKCPVAENVPIDFLAQKTAGFSGADLAELCQRAARAAIR-DAID 707
Score = 218 (81.8 bits), Expect = 2.4e-27, Sum P(2) = 2.4e-27
Identities = 57/180 (31%), Positives = 88/180 (48%)
Query: 15 FIRVVGSEFVQKYLGEGPRMVRDVFRLAKENSPXXXXXXXXXXXXTKRFDAQTGADREVQ 74
F + G E + K GE +R F A++NSP KR +T + E +
Sbjct: 269 FFLINGPEVMSKMAGEAEANLRRAFEEAEKNSPAIIFIDEIDSIAPKR--EKTNGEVE-R 325
Query: 75 RILLELLNQMDGFDQTTNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLVFS 134
R++ +LL MDG V VI ATNR +++DPAL R GR DR+I+ +PD + +
Sbjct: 326 RVVSQLLTLMDGIKSRGQVVVIAATNRQNSIDPALRRFGRFDREIDIGVPDDNGRFEILR 385
Query: 135 TITAKMNLSDEVDLEDYVARPDRISGADINAICQEVIMATNRADTLDPALLRPGRLDRKI 194
T M LS +V LE+ + GAD+ +C E + R + +D L +D+++
Sbjct: 386 IHTKNMKLSPDVKLEELASNTHGFVGADLAQLCTEAALTCIR-EKMDVIDLEDEIIDKEV 444
Score = 170 (64.9 bits), Expect = 1.5e-09, P = 1.5e-09
Identities = 38/110 (34%), Positives = 61/110 (55%)
Query: 204 KRLVFSTITAKMNFMLNIGNLQVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLV 263
+R V S + M+ + + G + VI ATNR +++DPAL R GR DR+I+ +PD + +
Sbjct: 324 ERRVVSQLLTLMDGIKSRGQVVVIAATNRQNSIDPALRRFGRFDREIDIGVPDDNGRFEI 383
Query: 264 FSTITAKMNLSDEVDLEDYVARPDRISGADINAICQEAGMHAVRENRYIV 313
T M LS +V LE+ + GAD+ +C EA + +RE ++
Sbjct: 384 LRIHTKNMKLSPDVKLEELASNTHGFVGADLAQLCTEAALTCIREKMDVI 433
Score = 159 (61.0 bits), Expect = 2.4e-27, Sum P(2) = 2.4e-27
Identities = 35/86 (40%), Positives = 50/86 (58%)
Query: 223 NLQVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLVFSTITAKMNLSDEVDLEDY 282
NL I ATNR + LD ALLRPGRLD+ I PLPD + + + I K +++ V ++
Sbjct: 619 NLFFIGATNRPELLDEALLRPGRLDQLIYIPLPDLGARISILTAILRKCPVAENVPIDFL 678
Query: 283 VARPDRISGADINAICQEAGMHAVRE 308
+ SGAD+ +CQ A A+R+
Sbjct: 679 AQKTAGFSGADLAELCQRAARAAIRD 704
Score = 91 (37.1 bits), Expect = 3.3e-13, Sum P(2) = 3.3e-13
Identities = 18/31 (58%), Positives = 24/31 (77%)
Query: 170 VIMATNRADTLDPALLRPGRLDRKIEFPLPD 200
VI ATNR +++DPAL R GR DR+I+ +PD
Sbjct: 346 VIAATNRQNSIDPALRRFGRFDREIDIGVPD 376
>UNIPROTKB|E2QSC5 [details] [associations]
symbol:SPATA5L1 "Uncharacterized protein" species:9615
"Canis lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GO:GO:0017111 Ensembl:ENSCAFT00000021792 Uniprot:E2QSC5
Length = 747
Score = 194 (73.4 bits), Expect = 2.5e-27, Sum P(2) = 2.5e-27
Identities = 55/175 (31%), Positives = 81/175 (46%)
Query: 9 TELVTAFIRVVGSEFVQKYL--------GEGPRMVRDVFRLAKE---NSPXXXXXXXXXX 57
T+LV A R G+E + GE VR VF A+E P
Sbjct: 238 TQLVRAVAREAGAELLAVSAPALQGARPGETEENVRRVFGRARELASRGPTLLFLDEVDA 297
Query: 58 XXTKRFDAQTGADREVQRILLELLNQMDGFDQTTNVKVIMATNRADTLDPALLRPGRLDR 117
+R A + R + ++L +DG +V V+ +TNR D LDPAL RPGR DR
Sbjct: 298 LCPRRGGAHRAPE---SRAVAQVLTLLDGIRGDRDVVVVASTNRPDALDPALRRPGRFDR 354
Query: 118 KIEFPLPDRRQKRLVFSTITAKMNLSDEVDLEDYVARPDRISGADINAICQEVIM 172
++ P +Q++ + IT+KM +S +VDL GAD+ A+C+E +
Sbjct: 355 EVVIGTPTLKQRKAILQVITSKMPISSQVDLSLLAEMTVGYVGADLTALCREAAL 409
Score = 186 (70.5 bits), Expect = 2.5e-27, Sum P(2) = 2.5e-27
Identities = 37/87 (42%), Positives = 53/87 (60%)
Query: 223 NLQVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLVFSTITAKMNLSDEVDLEDY 282
N+ ++ ATNR D LD ALLRPGRLD+ I P PD + + + T M + +V LE+
Sbjct: 615 NVMIVAATNRPDVLDDALLRPGRLDKIIYIPPPDEKGRLSILKVCTKNMPMGPDVSLENI 674
Query: 283 VARPDRISGADINAICQEAGMHAVREN 309
A SGAD+ +C+EA + A++EN
Sbjct: 675 AAETCFFSGADLGNLCKEAALLALQEN 701
Score = 184 (69.8 bits), Expect = 3.5e-11, P = 3.5e-11
Identities = 40/104 (38%), Positives = 61/104 (58%)
Query: 226 VIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLVFSTITAKMNLSDEVDLEDYVAR 285
V+ +TNR D LDPAL RPGR DR++ P +Q++ + IT+KM +S +VDL
Sbjct: 332 VVASTNRPDALDPALRRPGRFDREVVIGTPTLKQRKAILQVITSKMPISSQVDLSLLAEM 391
Query: 286 PDRISGADINAICQEAGMHAV---RENRY--IVLPKDFEKGYKK 324
GAD+ A+C+EA +HA+ +N+ + DF + +KK
Sbjct: 392 TVGYVGADLTALCREAALHALLHSEKNKDNPAIDETDFFEAFKK 435
Score = 174 (66.3 bits), Expect = 8.3e-14, Sum P(2) = 8.3e-14
Identities = 39/127 (30%), Positives = 64/127 (50%)
Query: 92 NVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLVFSTITAKMNLSDEVDLEDY 151
NV ++ ATNR D LD ALLRPGRLD+ I P PD + + + T M + +V LE+
Sbjct: 615 NVMIVAATNRPDVLDDALLRPGRLDKIIYIPPPDEKGRLSILKVCTKNMPMGPDVSLENI 674
Query: 152 VARPDRISGADINAICQEVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRL-VFST 210
A SGAD+ +C+E + + + L+ ++ + ++ P + L ++
Sbjct: 675 AAETCFFSGADLGNLCKEAALLALQENGLEATTVKQEHFLKSLKTVKPSLSPEDLTLYEN 734
Query: 211 ITAKMNF 217
+ K F
Sbjct: 735 LFQKQGF 741
Score = 121 (47.7 bits), Expect = 1.4e-19, Sum P(2) = 1.4e-19
Identities = 22/46 (47%), Positives = 31/46 (67%)
Query: 170 VIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLVFSTITAKM 215
V+ +TNR D LDPAL RPGR DR++ P +Q++ + IT+KM
Sbjct: 332 VVASTNRPDALDPALRRPGRFDREVVIGTPTLKQRKAILQVITSKM 377
Score = 79 (32.9 bits), Expect = 3.2e-15, Sum P(2) = 3.2e-15
Identities = 21/86 (24%), Positives = 43/86 (50%)
Query: 3 LCTSFDTELVTAFIRVVGSEFVQKYLGEGPRMV--RDVFRLAKENSPXXXXXXXXXXXXT 60
L + T +F+ V G++ ++G+ +++ + VFR A+ N+P
Sbjct: 506 LVRALATSCHCSFVSVSGADLFSPFVGDSEKVLSQQKVFRQARANTPAIVFLDEIDSILG 565
Query: 61 KRFDAQTGADREVQRILLELLNQMDG 86
R ++T + + +R+L LLN++DG
Sbjct: 566 SRSISKTECNVQ-ERVLSVLLNELDG 590
>UNIPROTKB|F6UUI0 [details] [associations]
symbol:SPATA5L1 "Uncharacterized protein" species:9615
"Canis lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GeneTree:ENSGT00700000104502 GO:GO:0017111 OMA:TWEQIGG
Ensembl:ENSCAFT00000021792 EMBL:AAEX03016099 Uniprot:F6UUI0
Length = 789
Score = 194 (73.4 bits), Expect = 3.0e-27, Sum P(2) = 3.0e-27
Identities = 55/175 (31%), Positives = 81/175 (46%)
Query: 9 TELVTAFIRVVGSEFVQKYL--------GEGPRMVRDVFRLAKE---NSPXXXXXXXXXX 57
T+LV A R G+E + GE VR VF A+E P
Sbjct: 282 TQLVRAVAREAGAELLAVSAPALQGARPGETEENVRRVFGRARELASRGPTLLFLDEVDA 341
Query: 58 XXTKRFDAQTGADREVQRILLELLNQMDGFDQTTNVKVIMATNRADTLDPALLRPGRLDR 117
+R A + R + ++L +DG +V V+ +TNR D LDPAL RPGR DR
Sbjct: 342 LCPRRGGAHRAPE---SRAVAQVLTLLDGIRGDRDVVVVASTNRPDALDPALRRPGRFDR 398
Query: 118 KIEFPLPDRRQKRLVFSTITAKMNLSDEVDLEDYVARPDRISGADINAICQEVIM 172
++ P +Q++ + IT+KM +S +VDL GAD+ A+C+E +
Sbjct: 399 EVVIGTPTLKQRKAILQVITSKMPISSQVDLSLLAEMTVGYVGADLTALCREAAL 453
Score = 186 (70.5 bits), Expect = 3.0e-27, Sum P(2) = 3.0e-27
Identities = 37/87 (42%), Positives = 53/87 (60%)
Query: 223 NLQVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLVFSTITAKMNLSDEVDLEDY 282
N+ ++ ATNR D LD ALLRPGRLD+ I P PD + + + T M + +V LE+
Sbjct: 657 NVMIVAATNRPDVLDDALLRPGRLDKIIYIPPPDEKGRLSILKVCTKNMPMGPDVSLENI 716
Query: 283 VARPDRISGADINAICQEAGMHAVREN 309
A SGAD+ +C+EA + A++EN
Sbjct: 717 AAETCFFSGADLGNLCKEAALLALQEN 743
Score = 184 (69.8 bits), Expect = 3.8e-11, P = 3.8e-11
Identities = 40/104 (38%), Positives = 61/104 (58%)
Query: 226 VIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLVFSTITAKMNLSDEVDLEDYVAR 285
V+ +TNR D LDPAL RPGR DR++ P +Q++ + IT+KM +S +VDL
Sbjct: 376 VVASTNRPDALDPALRRPGRFDREVVIGTPTLKQRKAILQVITSKMPISSQVDLSLLAEM 435
Query: 286 PDRISGADINAICQEAGMHAV---RENRY--IVLPKDFEKGYKK 324
GAD+ A+C+EA +HA+ +N+ + DF + +KK
Sbjct: 436 TVGYVGADLTALCREAALHALLHSEKNKDNPAIDETDFFEAFKK 479
Score = 174 (66.3 bits), Expect = 8.9e-15, Sum P(2) = 8.9e-15
Identities = 39/127 (30%), Positives = 64/127 (50%)
Query: 92 NVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLVFSTITAKMNLSDEVDLEDY 151
NV ++ ATNR D LD ALLRPGRLD+ I P PD + + + T M + +V LE+
Sbjct: 657 NVMIVAATNRPDVLDDALLRPGRLDKIIYIPPPDEKGRLSILKVCTKNMPMGPDVSLENI 716
Query: 152 VARPDRISGADINAICQEVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRL-VFST 210
A SGAD+ +C+E + + + L+ ++ + ++ P + L ++
Sbjct: 717 AAETCFFSGADLGNLCKEAALLALQENGLEATTVKQEHFLKSLKTVKPSLSPEDLTLYEN 776
Query: 211 ITAKMNF 217
+ K F
Sbjct: 777 LFQKQGF 783
Score = 121 (47.7 bits), Expect = 1.6e-19, Sum P(2) = 1.6e-19
Identities = 22/46 (47%), Positives = 31/46 (67%)
Query: 170 VIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLVFSTITAKM 215
V+ +TNR D LDPAL RPGR DR++ P +Q++ + IT+KM
Sbjct: 376 VVASTNRPDALDPALRRPGRFDREVVIGTPTLKQRKAILQVITSKM 421
Score = 89 (36.4 bits), Expect = 3.4e-16, Sum P(2) = 3.4e-16
Identities = 21/84 (25%), Positives = 42/84 (50%)
Query: 3 LCTSFDTELVTAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENSPXXXXXXXXXXXXTKR 62
L + T +F+ V G++ ++G+ +++ VFR A+ N+P R
Sbjct: 550 LVRALATSCHCSFVSVSGADLFSPFVGDSEKVLSQVFRQARANTPAIVFLDEIDSILGSR 609
Query: 63 FDAQTGADREVQRILLELLNQMDG 86
++T + + +R+L LLN++DG
Sbjct: 610 SISKTECNVQ-ERVLSVLLNELDG 632
>UNIPROTKB|A7YSY2 [details] [associations]
symbol:SPATA5L1 "Spermatogenesis-associated protein 5-like
protein 1" species:9913 "Bos taurus" [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GO:GO:0005737 eggNOG:COG0464 HOGENOM:HOG000223225
GeneTree:ENSGT00700000104502 GO:GO:0017111 HOVERGEN:HBG001226
EMBL:BC114696 IPI:IPI00693499 RefSeq:NP_001099095.1
UniGene:Bt.21280 ProteinModelPortal:A7YSY2 PRIDE:A7YSY2
Ensembl:ENSBTAT00000024327 GeneID:533070 KEGG:bta:533070 CTD:79029
InParanoid:A7YSY2 OMA:TWEQIGG OrthoDB:EOG42RD70 NextBio:20875900
Uniprot:A7YSY2
Length = 767
Score = 202 (76.2 bits), Expect = 3.2e-27, Sum P(2) = 3.2e-27
Identities = 55/175 (31%), Positives = 82/175 (46%)
Query: 9 TELVTAFIRVVGSEFVQKYL--------GEGPRMVRDVFRLAKE---NSPXXXXXXXXXX 57
T+LV A R G+E + GE VR +F+ A+E P
Sbjct: 248 TQLVRAVARETGAELLAVSAPALQGARPGETEENVRRIFKRARELASRRPTLLFLDEVDA 307
Query: 58 XXTKRFDAQTGADREVQRILLELLNQMDGFDQTTNVKVIMATNRADTLDPALLRPGRLDR 117
+R + R++ ++L +DG + V V+ +TNR D LDPAL RPGR DR
Sbjct: 308 LCPRRGGPHQAPE---SRVVAQVLTLLDGIGEDREVVVVGSTNRPDALDPALRRPGRFDR 364
Query: 118 KIEFPLPDRRQKRLVFSTITAKMNLSDEVDLEDYVARPDRISGADINAICQEVIM 172
++ P RQ++ + IT+KM +S +VDL GAD+ A+C+E M
Sbjct: 365 EVVIGTPTLRQRKAILQVITSKMPISGQVDLNLLAEMTVGYVGADLTALCREAAM 419
Score = 181 (68.8 bits), Expect = 7.9e-11, P = 7.9e-11
Identities = 45/125 (36%), Positives = 70/125 (56%)
Query: 209 STITAKMNFMLN-IGN---LQVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLVF 264
S + A++ +L+ IG + V+ +TNR D LDPAL RPGR DR++ P RQ++ +
Sbjct: 321 SRVVAQVLTLLDGIGEDREVVVVGSTNRPDALDPALRRPGRFDREVVIGTPTLRQRKAIL 380
Query: 265 STITAKMNLSDEVDLEDYVARPDRISGADINAICQEAGMHAV-----RENRYIVLPKDFE 319
IT+KM +S +VDL GAD+ A+C+EA M A+ ++ + DF
Sbjct: 381 QVITSKMPISGQVDLNLLAEMTVGYVGADLTALCREAAMQALLHSEKNQDNPTIDETDFL 440
Query: 320 KGYKK 324
+ +KK
Sbjct: 441 EAFKK 445
Score = 176 (67.0 bits), Expect = 3.2e-27, Sum P(2) = 3.2e-27
Identities = 37/87 (42%), Positives = 51/87 (58%)
Query: 223 NLQVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLVFSTITAKMNLSDEVDLEDY 282
N+ V+ ATNR D LD ALLRPGRLD+ I P PD + + + T + +V LE
Sbjct: 635 NVIVVAATNRPDVLDDALLRPGRLDKIIYIPPPDEKGRLSILKVCTKNTPMGPDVSLEKV 694
Query: 283 VARPDRISGADINAICQEAGMHAVREN 309
A SGAD+ +C+EA + A++EN
Sbjct: 695 AAETCFFSGADLGNLCKEAALLALQEN 721
Score = 168 (64.2 bits), Expect = 6.5e-14, Sum P(2) = 6.5e-14
Identities = 40/130 (30%), Positives = 63/130 (48%)
Query: 91 TNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLVFSTITAKMNLSDEVDLED 150
+NV V+ ATNR D LD ALLRPGRLD+ I P PD + + + T + +V LE
Sbjct: 634 SNVIVVAATNRPDVLDDALLRPGRLDKIIYIPPPDEKGRLSILKVCTKNTPMGPDVSLEK 693
Query: 151 YVARPDRISGADINAICQEVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRL-VFS 209
A SGAD+ +C+E + + + L+ ++ ++ P K L ++
Sbjct: 694 VAAETCFFSGADLGNLCKEAALLALQENGLEVTTVKQEHFLESLKTVKPSLSHKDLTLYK 753
Query: 210 TITAKMNFML 219
+ K F +
Sbjct: 754 NLFQKKEFSI 763
Score = 122 (48.0 bits), Expect = 1.8e-18, Sum P(2) = 1.8e-18
Identities = 23/46 (50%), Positives = 31/46 (67%)
Query: 170 VIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLVFSTITAKM 215
V+ +TNR D LDPAL RPGR DR++ P RQ++ + IT+KM
Sbjct: 342 VVGSTNRPDALDPALRRPGRFDREVVIGTPTLRQRKAILQVITSKM 387
Score = 87 (35.7 bits), Expect = 7.7e-15, Sum P(2) = 7.7e-15
Identities = 21/84 (25%), Positives = 41/84 (48%)
Query: 3 LCTSFDTELVTAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENSPXXXXXXXXXXXXTKR 62
L + T +F+ V G++ ++G+ +++ VFR A+ N+P R
Sbjct: 516 LVRALATSCRCSFVSVSGADLFSPFVGDSEKILSQVFRQARANTPAIVFLDEIDSILGSR 575
Query: 63 FDAQTGADREVQRILLELLNQMDG 86
++T + + R+L LLN++DG
Sbjct: 576 SISRTECNVQ-DRVLSVLLNELDG 598
>UNIPROTKB|F1SN45 [details] [associations]
symbol:SPATA5L1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005524 "ATP binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GeneTree:ENSGT00700000104502 GO:GO:0017111 OMA:TWEQIGG
EMBL:CU457441 Ensembl:ENSSSCT00000005157 Uniprot:F1SN45
Length = 755
Score = 192 (72.6 bits), Expect = 3.5e-27, Sum P(2) = 3.5e-27
Identities = 55/175 (31%), Positives = 80/175 (45%)
Query: 9 TELVTAFIRVVGSEFVQKYL--------GEGPRMVRDVFRLAKE---NSPXXXXXXXXXX 57
T+LV A R G+E + GE VR VF+ A+E P
Sbjct: 248 TQLVRAVAREAGAELLAVSAPALQGARPGETEENVRRVFQRAQELAGRRPTLLFLDEVDA 307
Query: 58 XXTKRFDAQTGADREVQRILLELLNQMDGFDQTTNVKVIMATNRADTLDPALLRPGRLDR 117
+R + R++ ++L +DG V V+ +TNR D LDPAL RPGR DR
Sbjct: 308 LCPRRGGPHQAPE---SRVVAQVLTLLDGISGDREVVVVGSTNRPDALDPALRRPGRFDR 364
Query: 118 KIEFPLPDRRQKRLVFSTITAKMNLSDEVDLEDYVARPDRISGADINAICQEVIM 172
++ P Q++ + IT+KM +S +VDL GAD+ A+C+E M
Sbjct: 365 EVVIGTPTLGQRKAILQVITSKMPISSQVDLSLLAEMTVGYVGADLTALCREAAM 419
Score = 187 (70.9 bits), Expect = 3.5e-27, Sum P(2) = 3.5e-27
Identities = 37/87 (42%), Positives = 53/87 (60%)
Query: 223 NLQVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLVFSTITAKMNLSDEVDLEDY 282
N+ ++ ATNR D LD ALLRPGRLD+ I P PD + + + T M + +V LE+
Sbjct: 623 NVMIVAATNRPDVLDDALLRPGRLDKIIYIPPPDEKSRLSILRVCTKNMPVGPDVSLENL 682
Query: 283 VARPDRISGADINAICQEAGMHAVREN 309
A SGAD+ +C+EA + A++EN
Sbjct: 683 AAETCLFSGADLGNLCKEAALLALQEN 709
Score = 184 (69.8 bits), Expect = 3.5e-11, P = 3.5e-11
Identities = 44/125 (35%), Positives = 72/125 (57%)
Query: 209 STITAKMNFMLN--IGNLQVIM--ATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLVF 264
S + A++ +L+ G+ +V++ +TNR D LDPAL RPGR DR++ P Q++ +
Sbjct: 321 SRVVAQVLTLLDGISGDREVVVVGSTNRPDALDPALRRPGRFDREVVIGTPTLGQRKAIL 380
Query: 265 STITAKMNLSDEVDLEDYVARPDRISGADINAICQEAGMHAV-----RENRYIVLPKDFE 319
IT+KM +S +VDL GAD+ A+C+EA MHA+ ++ ++ DF
Sbjct: 381 QVITSKMPISSQVDLSLLAEMTVGYVGADLTALCREAAMHALLHSGKNQDNPLIDEIDFL 440
Query: 320 KGYKK 324
+ +KK
Sbjct: 441 EAFKK 445
Score = 181 (68.8 bits), Expect = 4.5e-16, Sum P(2) = 4.5e-16
Identities = 40/128 (31%), Positives = 65/128 (50%)
Query: 91 TNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLVFSTITAKMNLSDEVDLED 150
+NV ++ ATNR D LD ALLRPGRLD+ I P PD + + + T M + +V LE+
Sbjct: 622 SNVMIVAATNRPDVLDDALLRPGRLDKIIYIPPPDEKSRLSILRVCTKNMPVGPDVSLEN 681
Query: 151 YVARPDRISGADINAICQEVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRL-VFS 209
A SGAD+ +C+E + + + L+ ++ + ++ P K L ++
Sbjct: 682 LAAETCLFSGADLGNLCKEAALLALQENGLEATTVKQEHFLKSLKTVKPSLSHKDLALYK 741
Query: 210 TITAKMNF 217
+ K F
Sbjct: 742 NLFQKQGF 749
Score = 117 (46.2 bits), Expect = 2.8e-19, Sum P(2) = 2.8e-19
Identities = 27/60 (45%), Positives = 36/60 (60%)
Query: 156 DRISGADINAICQEVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLVFSTITAKM 215
D ISG D + V+ +TNR D LDPAL RPGR DR++ P Q++ + IT+KM
Sbjct: 332 DGISG-DREVV---VVGSTNRPDALDPALRRPGRFDREVVIGTPTLGQRKAILQVITSKM 387
Score = 93 (37.8 bits), Expect = 8.9e-17, Sum P(2) = 8.9e-17
Identities = 21/84 (25%), Positives = 43/84 (51%)
Query: 3 LCTSFDTELVTAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENSPXXXXXXXXXXXXTKR 62
L + T +F+ V G++ ++G+ +++ VF+ A+ N+P R
Sbjct: 516 LVRALATSCHCSFVSVSGADLFSPFVGDSEKILSQVFQQARANTPAVVFLDEIDSILGSR 575
Query: 63 FDAQTGADREVQRILLELLNQMDG 86
++TG + + +R+L LLN++DG
Sbjct: 576 SISKTGCNVQ-ERVLSVLLNELDG 598
>UNIPROTKB|Q8NB90 [details] [associations]
symbol:SPATA5 "Spermatogenesis-associated protein 5"
species:9606 "Homo sapiens" [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0007275 "multicellular organismal development" evidence=IEA]
[GO:0007283 "spermatogenesis" evidence=IEA] [GO:0030154 "cell
differentiation" evidence=IEA] [GO:0005739 "mitochondrion"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IDA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 InterPro:IPR003338
GO:GO:0007275 GO:GO:0005739 GO:GO:0005524 GO:GO:0005737
GO:GO:0030154 GO:GO:0007283 HSSP:Q01853 eggNOG:COG0464
HOGENOM:HOG000223225 KO:K14575 GO:GO:0017111 Gene3D:2.40.40.20
InterPro:IPR009010 SUPFAM:SSF50692 SMART:SM01073 EMBL:AC021205
EMBL:AF361489 EMBL:AF479656 EMBL:AK091384 EMBL:AC026402
EMBL:AC097492 EMBL:AC109357 EMBL:BC048217 IPI:IPI00329583
IPI:IPI00890715 IPI:IPI00890727 RefSeq:NP_660208.2
UniGene:Hs.709648 ProteinModelPortal:Q8NB90 SMR:Q8NB90
IntAct:Q8NB90 STRING:Q8NB90 PhosphoSite:Q8NB90 DMDM:308153554
PaxDb:Q8NB90 PRIDE:Q8NB90 DNASU:166378 Ensembl:ENST00000274008
GeneID:166378 KEGG:hsa:166378 UCSC:uc003iey.3 UCSC:uc003iez.4
CTD:166378 GeneCards:GC04P123844 H-InvDB:HIX0022056 HGNC:HGNC:18119
HPA:HPA036451 MIM:613940 neXtProt:NX_Q8NB90 PharmGKB:PA38294
HOVERGEN:HBG108504 InParanoid:Q8NB90 OMA:NDIRPSA OrthoDB:EOG43FGWF
PhylomeDB:Q8NB90 GenomeRNAi:166378 NextBio:88589 Bgee:Q8NB90
CleanEx:HS_SPATA5 Genevestigator:Q8NB90 Uniprot:Q8NB90
Length = 893
Score = 302 (111.4 bits), Expect = 1.1e-25, P = 1.1e-25
Identities = 62/164 (37%), Positives = 93/164 (56%)
Query: 15 FIRVVGSEFVQKYLGEGPRMVRDVFRLAKENSPXXXXXXXXXXXXTKRFDAQTGADREVQ 74
F+ + G E + KY+GE R VR+ FR A+ +P +R + GA
Sbjct: 689 FLAIKGPELMNKYVGESERAVRETFRKARAVAPSIIFFDELDALAVER-GSSLGAGNVAD 747
Query: 75 RILLELLNQMDGFDQTTNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLVFS 134
R+L +LL +MDG +Q +V ++ ATNR D +D AL+RPGR+DR I PLPD +R +F
Sbjct: 748 RVLAQLLTEMDGIEQLKDVTILAATNRPDRIDKALMRPGRIDRIIYVPLPDAATRREIFK 807
Query: 135 TITAKMNLSDEVDLEDYVARPDRISGADINAICQEVIMATNRAD 178
M +S+EVDL++ + + D SGA+I A+C+E + D
Sbjct: 808 LQFHSMPVSNEVDLDELILQTDAYSGAEIVAVCREAALLALEED 851
Score = 203 (76.5 bits), Expect = 4.8e-27, Sum P(2) = 4.8e-27
Identities = 40/103 (38%), Positives = 67/103 (65%)
Query: 207 VFSTITAKMNFMLNIGNLQVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLVFST 266
V + + +M+ + + ++ ++ ATNR D +D AL+RPGR+DR I PLPD +R +F
Sbjct: 749 VLAQLLTEMDGIEQLKDVTILAATNRPDRIDKALMRPGRIDRIIYVPLPDAATRREIFKL 808
Query: 267 ITAKMNLSDEVDLEDYVARPDRISGADINAICQEAGMHAVREN 309
M +S+EVDL++ + + D SGA+I A+C+EA + A+ E+
Sbjct: 809 QFHSMPVSNEVDLDELILQTDAYSGAEIVAVCREAALLALEED 851
Score = 175 (66.7 bits), Expect = 4.8e-27, Sum P(2) = 4.8e-27
Identities = 54/180 (30%), Positives = 81/180 (45%)
Query: 12 VTAFIRVV-GSEFVQKYLGEGPRMVRDVFRLAKENSPXXXXXXXXXXXXTKRFDAQTGAD 70
V A++ V+ G E + K+ GE +R +F A P KR GA
Sbjct: 411 VGAYVSVINGPEIISKFYGETEAKLRQIFAEATLRHPSIIFIDELDALCPKR----EGAQ 466
Query: 71 REVQ-RILLELLNQMDGFDQTTN---VKVIMATNRADTLDPALLRPGRLDRKIEFPLPDR 126
EV+ R++ LL MDG + V V+ ATNR LD AL RPGR D++IE +P+
Sbjct: 467 NEVEKRVVASLLTLMDGIGSEVSEGQVLVLGATNRPHALDAALRRPGRFDKEIEIGVPNA 526
Query: 127 RQKRLVFSTITAKM-NLSDEVDLEDYVARPDRISGADINAICQEV-IMATNRADTLDPAL 184
+ + + + ++ +L E +L GAD+ +C E + A R P L
Sbjct: 527 QDRLDILQKLLRRVPHLLTEAELLQLANSAHGYVGADLKVLCNEAGLCALRRILKKQPNL 586
Score = 141 (54.7 bits), Expect = 2.8e-06, P = 2.8e-06
Identities = 35/108 (32%), Positives = 59/108 (54%)
Query: 203 QKRLVFSTITAK--MNFMLNIGNLQVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQK 260
+KR+V S +T + ++ G + V+ ATNR LD AL RPGR D++IE +P+ + +
Sbjct: 470 EKRVVASLLTLMDGIGSEVSEGQVLVLGATNRPHALDAALRRPGRFDKEIEIGVPNAQDR 529
Query: 261 RLVFSTITAKM-NLSDEVDLEDYVARPDRISGADINAICQEAGMHAVR 307
+ + ++ +L E +L GAD+ +C EAG+ A+R
Sbjct: 530 LDILQKLLRRVPHLLTEAELLQLANSAHGYVGADLKVLCNEAGLCALR 577
Score = 122 (48.0 bits), Expect = 3.5e-18, Sum P(2) = 3.5e-18
Identities = 37/117 (31%), Positives = 57/117 (48%)
Query: 170 VIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLVFSTITAKMNFMLNIGNLQVIMA 229
++ ATNR D +D AL+RPGR+DR I PLPD +R +F M + ++I+
Sbjct: 768 ILAATNRPDRIDKALMRPGRIDRIIYVPLPDAATRREIFKLQFHSMPVSNEVDLDELILQ 827
Query: 230 TNRADTLD-PALLRPGRL---DRKIEFPLPDRRQKRLVFSTITAKMNLSDEVDLEDY 282
T+ + A+ R L + I+ L +R ST+T ++ S EDY
Sbjct: 828 TDAYSGAEIVAVCREAALLALEEDIQANLIMKRHFTQALSTVTPRIPESLRRFYEDY 884
>UNIPROTKB|Q9BVQ7 [details] [associations]
symbol:SPATA5L1 "Spermatogenesis-associated protein 5-like
protein 1" species:9606 "Homo sapiens" [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GO:GO:0005737 HSSP:Q01853 eggNOG:COG0464 HOGENOM:HOG000223225
GO:GO:0017111 EMBL:AC025580 HOVERGEN:HBG001226 CTD:79029
OMA:TWEQIGG OrthoDB:EOG42RD70 EMBL:AK022348 EMBL:AK023232
EMBL:AK291457 EMBL:AC090527 EMBL:BC000981 IPI:IPI00031608
IPI:IPI00386906 IPI:IPI00890778 RefSeq:NP_076968.2
UniGene:Hs.369657 ProteinModelPortal:Q9BVQ7 SMR:Q9BVQ7
STRING:Q9BVQ7 PhosphoSite:Q9BVQ7 DMDM:292495038 PaxDb:Q9BVQ7
PRIDE:Q9BVQ7 Ensembl:ENST00000305560 Ensembl:ENST00000531970
Ensembl:ENST00000559860 GeneID:79029 KEGG:hsa:79029 UCSC:uc001zve.3
GeneCards:GC15P045694 H-InvDB:HIX0012209 HGNC:HGNC:28762
HPA:HPA043679 neXtProt:NX_Q9BVQ7 PharmGKB:PA134923477
InParanoid:Q9BVQ7 PhylomeDB:Q9BVQ7 GenomeRNAi:79029 NextBio:67739
Bgee:Q9BVQ7 CleanEx:HS_SPATA5L1 Genevestigator:Q9BVQ7
Uniprot:Q9BVQ7
Length = 753
Score = 197 (74.4 bits), Expect = 5.9e-27, Sum P(2) = 5.9e-27
Identities = 56/172 (32%), Positives = 80/172 (46%)
Query: 9 TELVTAFIRVVGSEFVQKYL--------GEGPRMVRDVFRLAKENSPXXXXXXXXXXXXT 60
T+LV A R G+E + GE VR VF+ A+E +
Sbjct: 248 TQLVRAVAREAGAELLAVSAPALQGSRPGETEENVRRVFQRARELASRGPSLLFLDEMDA 307
Query: 61 KRFDAQTGADREVQRILLELLNQMDGFDQTTNVKVIMATNRADTLDPALLRPGRLDRKIE 120
Q G+ R++ ++L +DG V V+ ATNR D LDPAL RPGR DR++
Sbjct: 308 --LCPQRGSRAPESRVVAQVLTLLDGASGDREVVVVGATNRPDALDPALRRPGRFDREVV 365
Query: 121 FPLPDRRQKRLVFSTITAKMNLSDEVDLEDYVARPDRISGADINAICQEVIM 172
P +Q++ + IT+KM +S VDL GAD+ A+C+E M
Sbjct: 366 IGTPTLKQRKEILQVITSKMPISSHVDLGLLAEMTVGYVGADLTALCREAAM 417
Score = 185 (70.2 bits), Expect = 2.7e-11, P = 2.7e-11
Identities = 43/110 (39%), Positives = 65/110 (59%)
Query: 201 RRQKRLVFSTITAKMNFMLN--IGNLQVIM--ATNRADTLDPALLRPGRLDRKIEFPLPD 256
+R R S + A++ +L+ G+ +V++ ATNR D LDPAL RPGR DR++ P
Sbjct: 311 QRGSRAPESRVVAQVLTLLDGASGDREVVVVGATNRPDALDPALRRPGRFDREVVIGTPT 370
Query: 257 RRQKRLVFSTITAKMNLSDEVDLEDYVARPDRISGADINAICQEAGMHAV 306
+Q++ + IT+KM +S VDL GAD+ A+C+EA MHA+
Sbjct: 371 LKQRKEILQVITSKMPISSHVDLGLLAEMTVGYVGADLTALCREAAMHAL 420
Score = 179 (68.1 bits), Expect = 5.9e-27, Sum P(2) = 5.9e-27
Identities = 37/87 (42%), Positives = 52/87 (59%)
Query: 223 NLQVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLVFSTITAKMNLSDEVDLEDY 282
++ +I ATNR D LD ALLRPGRLD+ I P PD + + + T M + +V LE+
Sbjct: 621 SVMIIAATNRPDVLDTALLRPGRLDKIIYIPPPDHKGRLSILKVCTKTMPIGPDVSLENL 680
Query: 283 VARPDRISGADINAICQEAGMHAVREN 309
A SGAD+ +C EA + A++EN
Sbjct: 681 AAETCFFSGADLRNLCTEAALLALQEN 707
Score = 171 (65.3 bits), Expect = 3.2e-15, Sum P(2) = 3.2e-15
Identities = 41/127 (32%), Positives = 63/127 (49%)
Query: 92 NVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLVFSTITAKMNLSDEVDLEDY 151
+V +I ATNR D LD ALLRPGRLD+ I P PD + + + T M + +V LE+
Sbjct: 621 SVMIIAATNRPDVLDTALLRPGRLDKIIYIPPPDHKGRLSILKVCTKTMPIGPDVSLENL 680
Query: 152 VARPDRISGADINAICQEVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRL-VFST 210
A SGAD+ +C E + + + LD ++ + ++ P K L ++
Sbjct: 681 AAETCFFSGADLRNLCTEAALLALQENGLDATTVKQEHFLKSLKTVKPSLSCKDLALYEN 740
Query: 211 ITAKMNF 217
+ K F
Sbjct: 741 LFKKEGF 747
Score = 120 (47.3 bits), Expect = 1.2e-18, Sum P(2) = 1.2e-18
Identities = 23/46 (50%), Positives = 31/46 (67%)
Query: 170 VIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLVFSTITAKM 215
V+ ATNR D LDPAL RPGR DR++ P +Q++ + IT+KM
Sbjct: 340 VVGATNRPDALDPALRRPGRFDREVVIGTPTLKQRKEILQVITSKM 385
Score = 96 (38.9 bits), Expect = 3.8e-16, Sum P(2) = 3.8e-16
Identities = 21/84 (25%), Positives = 43/84 (51%)
Query: 3 LCTSFDTELVTAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENSPXXXXXXXXXXXXTKR 62
L + T +F+ V G++ ++G+ +++ +FR A+ ++P R
Sbjct: 514 LVRALATSCHCSFVSVSGADLFSPFVGDSEKVLSQIFRQARASTPAILFLDEIDSILGAR 573
Query: 63 FDAQTGADREVQRILLELLNQMDG 86
++TG D + +R+L LLN++DG
Sbjct: 574 SASKTGCDVQ-ERVLSVLLNELDG 596
>UNIPROTKB|E7ERY0 [details] [associations]
symbol:NVL "Nuclear valosin-containing protein-like"
species:9606 "Homo sapiens" [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GO:GO:0017111 EMBL:AC092809 HGNC:HGNC:8070 ChiTaRS:NVL
IPI:IPI00946072 ProteinModelPortal:E7ERY0 SMR:E7ERY0
Ensembl:ENST00000482491 ArrayExpress:E7ERY0 Bgee:E7ERY0
Uniprot:E7ERY0
Length = 580
Score = 248 (92.4 bits), Expect = 3.7e-19, P = 3.7e-19
Identities = 64/182 (35%), Positives = 94/182 (51%)
Query: 2 LLCTSFDTELVTAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENSPXXXXXXXXXXXXTK 61
LL + E FI V G E + Y+GE R VR VF+ AK ++P +
Sbjct: 354 LLAKAVANESGLNFISVKGPELLNMYVGESERAVRQVFQRAKNSAPCVIFFDEVDALCPR 413
Query: 62 RFDAQTGADREVQRILLELLNQMDGFDQTTNVKVIMATNRADTLDPALLRPGRLDRKIEF 121
R D +TGA R++ +LL +MDG + V ++ ATNR D +DPA+LRPGRLD+ +
Sbjct: 414 RSDRETGAS---VRVVNQLLTEMDGLEARQQVFIMAATNRPDIIDPAILRPGRLDKTLFV 470
Query: 122 PLPDRRQKRLVFSTIT---AKMNLSDEVDLEDYVA--RPDRISGADINAICQEVIMATNR 176
LP + + TIT K L +V+LE R D +GAD++A+ +E + R
Sbjct: 471 GLPPPADRLAILKTITKNGTKPPLDADVNLEAIAGDLRCDCYTGADLSALVREASICALR 530
Query: 177 AD 178
+
Sbjct: 531 QE 532
Score = 218 (81.8 bits), Expect = 6.2e-27, Sum P(2) = 6.2e-27
Identities = 56/173 (32%), Positives = 79/173 (45%)
Query: 5 TSFDTELVTAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENSPXXXXXXXXXXXXTKRFD 64
TS EL ++V E V GE + +R++F A N+P KR
Sbjct: 40 TSASRELDLPILKVAAPEIVSGVSGESEQKLRELFEQAVSNAPCIIFIDEIDAITPKREV 99
Query: 65 AQTGADREVQRILLELLNQMDGFDQTTNVKVIMATNRADTLDPALLRPGRLDRKIEFPLP 124
A +R + LL ++ ++ T V VI ATNR D+LDPAL R GR DR+I +P
Sbjct: 100 ASKDMERRIVAQLLTCMDDLNNVAATARVLVIGATNRPDSLDPALRRAGRFDREICLGIP 159
Query: 125 DRRQKRLVFSTITAKMNLSDEVDLEDYVARPDRISGADINAICQEVIM-ATNR 176
D + + T+ K+ L D GAD+ A+C+E M A NR
Sbjct: 160 DEASRERILQTLCRKLRLPQAFDFCHLAHLTPGFVGADLMALCREAAMCAVNR 212
Score = 170 (64.9 bits), Expect = 8.9e-10, P = 8.9e-10
Identities = 57/184 (30%), Positives = 90/184 (48%)
Query: 143 SDEVDLEDY-VARPDRISGADINAICQEVIMATNRADTLDPALLRPGRLDR---KIEFPL 198
S E+DL VA P+ +SG + Q++ +A + P ++ +D K E
Sbjct: 43 SRELDLPILKVAAPEIVSGVSGESE-QKLRELFEQAVSNAPCIIFIDEIDAITPKREVAS 101
Query: 199 PDRRQKRLVFSTITAK--MNFMLNIGNLQVIMATNRADTLDPALLRPGRLDRKIEFPLPD 256
D ++R+V +T +N + + VI ATNR D+LDPAL R GR DR+I +PD
Sbjct: 102 KDM-ERRIVAQLLTCMDDLNNVAATARVLVIGATNRPDSLDPALRRAGRFDREICLGIPD 160
Query: 257 RRQKRLVFSTITAKMNLSDEVDLEDYVARPDRISGADINAICQEAGMHAVRENRYIVLPK 316
+ + T+ K+ L D GAD+ A+C+EA M AV NR ++ +
Sbjct: 161 EASRERILQTLCRKLRLPQAFDFCHLAHLTPGFVGADLMALCREAAMCAV--NRVLMKLQ 218
Query: 317 DFEK 320
+ +K
Sbjct: 219 EQQK 222
Score = 150 (57.9 bits), Expect = 6.2e-27, Sum P(2) = 6.2e-27
Identities = 45/126 (35%), Positives = 68/126 (53%)
Query: 226 VIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLVFSTIT---AKMNLSDEVDLEDY 282
++ ATNR D +DPA+LRPGRLD+ + LP + + TIT K L +V+LE
Sbjct: 444 IMAATNRPDIIDPAILRPGRLDKTLFVGLPPPADRLAILKTITKNGTKPPLDADVNLEAI 503
Query: 283 VA--RPDRISGADINAICQEAGMHAVRENRYIVLPKDF-EKGYKKCAGMH---AVRENRY 336
R D +GAD++A+ +EA + A+R+ + K EKG K + H A ++ R
Sbjct: 504 AGDLRCDCYTGADLSALVREASICALRQE--MARQKSGNEKGELKVSHKHFEEAFKKVRS 561
Query: 337 IVLPKD 342
+ KD
Sbjct: 562 SISKKD 567
Score = 106 (42.4 bits), Expect = 2.4e-22, Sum P(2) = 2.4e-22
Identities = 26/68 (38%), Positives = 37/68 (54%)
Query: 170 VIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLVFSTIT---AKMNFMLNIGNLQV 226
++ ATNR D +DPA+LRPGRLD+ + LP + + TIT K ++ NL+
Sbjct: 444 IMAATNRPDIIDPAILRPGRLDKTLFVGLPPPADRLAILKTITKNGTKPPLDADV-NLEA 502
Query: 227 IMATNRAD 234
I R D
Sbjct: 503 IAGDLRCD 510
>POMBASE|SPBC16E9.10c [details] [associations]
symbol:SPBC16E9.10c "AAA family ATPase Rix7
(predicted)" species:4896 "Schizosaccharomyces pombe" [GO:0000055
"ribosomal large subunit export from nucleus" evidence=ISO]
[GO:0005524 "ATP binding" evidence=IC] [GO:0005634 "nucleus"
evidence=ISO;IDA] [GO:0005730 "nucleolus" evidence=ISO] [GO:0016887
"ATPase activity" evidence=ISO] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 PomBase:SPBC16E9.10c GO:GO:0005524 GO:GO:0005730
EMBL:CU329671 GO:GO:0016887 HSSP:Q01853 eggNOG:COG0464
HOGENOM:HOG000223225 GO:GO:0000055 KO:K14571 OMA:NDMTLKE
OrthoDB:EOG40GH00 PIR:T39584 RefSeq:NP_595792.1
ProteinModelPortal:O14325 STRING:O14325 EnsemblFungi:SPBC16E9.10c.1
GeneID:2539968 KEGG:spo:SPBC16E9.10c NextBio:20801111
Uniprot:O14325
Length = 779
Score = 261 (96.9 bits), Expect = 2.1e-21, P = 2.1e-21
Identities = 64/179 (35%), Positives = 96/179 (53%)
Query: 2 LLCTSFDTELVTAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENSPXXXXXXXXXXXXTK 61
LL + E FI + G E + KY+GE R VR VF A+ +SP +
Sbjct: 541 LLAKAVANESKANFISIRGPELLNKYVGESERAVRQVFLRARASSPCVIFFDELDAMVPR 600
Query: 62 RFDAQTGADREVQRILLELLNQMDGFDQTTNVKVIMATNRADTLDPALLRPGRLDRKIEF 121
R D+ + A R++ LL ++DG + V VI ATNR D +DPA+LRPGRLD+ +
Sbjct: 601 RDDSLSEAS---SRVVNTLLTELDGLSDRSGVYVIAATNRPDIIDPAMLRPGRLDKTLLV 657
Query: 122 PLPDRRQKRLVFSTITAKMNLSDEVDLEDYVARPDR---ISGADINAICQEVIMATNRA 177
LPD ++ + T+T + L +EV+L D + R +R SGAD+ A+ +E + R+
Sbjct: 658 DLPDAHERVEILKTLTKQTPLHEEVNL-DVLGRDERCSNFSGADLAALVREAAVTALRS 715
Score = 188 (71.2 bits), Expect = 1.2e-26, Sum P(2) = 1.2e-26
Identities = 51/159 (32%), Positives = 87/159 (54%)
Query: 207 VFSTITAKMNFMLNIGNLQVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLVFST 266
V +T+ +++ + + + VI ATNR D +DPA+LRPGRLD+ + LPD ++ + T
Sbjct: 612 VVNTLLTELDGLSDRSGVYVIAATNRPDIIDPAMLRPGRLDKTLLVDLPDAHERVEILKT 671
Query: 267 ITAKMNLSDEVDLEDYVARPDR---ISGADINAICQEAGMHAVRENRYIVLPKDFEKGYK 323
+T + L +EV+L D + R +R SGAD+ A+ +EA + A+R + + + E
Sbjct: 672 LTKQTPLHEEVNL-DVLGRDERCSNFSGADLAALVREAAVTALRSAVFADIASN-EPEIT 729
Query: 324 KCAGMHAVRENRYIVLPKDFEKGYKNNTKKDESEHEFYK 362
+ + + +R V DFE +KN K S+ + K
Sbjct: 730 QHSALEPIR-----VTNADFELAFKN-IKPSVSDRDRQK 762
Score = 187 (70.9 bits), Expect = 1.2e-26, Sum P(2) = 1.2e-26
Identities = 57/180 (31%), Positives = 81/180 (45%)
Query: 2 LLCTSFDTELVTAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENSPXXXXXXXXXXXXTK 61
+L + EL FI + V GE + VR+VF AK +P K
Sbjct: 223 MLANALANELGVPFISISAPSIVSGMSGESEKKVREVFEEAKSLAPCLMFIDEIDAVTPK 282
Query: 62 RFDAQTGADREVQRILLELLNQMD--GFDQTTN--VKVIMATNRADTLDPALLRPGRLDR 117
R AQ +R RI+ + L MD F++T V VI ATNR D+LD AL R GR DR
Sbjct: 283 RESAQREMER---RIVAQFLTCMDELSFEKTDGKPVLVIGATNRPDSLDSALRRAGRFDR 339
Query: 118 KIEFPLPDRRQKRLVFSTITAKMNLSDEVDLEDYVARPDRISGADINAICQEV-IMATNR 176
+I +P + + + T+ + LS + D + GAD+ A+ I+A R
Sbjct: 340 EICLTVPSQDAREKILRTMAKGLKLSGDFDFRQLAKQTPGYVGADLKALTAAAGIIAIKR 399
Score = 139 (54.0 bits), Expect = 3.9e-06, P = 3.9e-06
Identities = 45/161 (27%), Positives = 77/161 (47%)
Query: 152 VARPDRISGADINAICQEVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQ--KRLV-- 207
++ P +SG + ++V A +L P L+ +D +R+ +R+V
Sbjct: 239 ISAPSIVSGMSGESE-KKVREVFEEAKSLAPCLMFIDEIDAVTPKRESAQREMERRIVAQ 297
Query: 208 FSTITAKMNFMLNIGN-LQVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLVFST 266
F T +++F G + VI ATNR D+LD AL R GR DR+I +P + + + T
Sbjct: 298 FLTCMDELSFEKTDGKPVLVIGATNRPDSLDSALRRAGRFDREICLTVPSQDAREKILRT 357
Query: 267 ITAKMNLSDEVDLEDYVARPDRISGADINAICQEAGMHAVR 307
+ + LS + D + GAD+ A+ AG+ A++
Sbjct: 358 MAKGLKLSGDFDFRQLAKQTPGYVGADLKALTAAAGIIAIK 398
Score = 120 (47.3 bits), Expect = 1.5e-19, Sum P(2) = 1.5e-19
Identities = 27/70 (38%), Positives = 38/70 (54%)
Query: 170 VIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLVFSTITAKMNFMLNIGNLQVIMA 229
VI ATNR D +DPA+LRPGRLD+ + LPD ++ + T+T + + NL V+
Sbjct: 631 VIAATNRPDIIDPAMLRPGRLDKTLLVDLPDAHERVEILKTLTKQTPLHEEV-NLDVLGR 689
Query: 230 TNRADTLDPA 239
R A
Sbjct: 690 DERCSNFSGA 699
>RGD|1595990 [details] [associations]
symbol:Spata5l1 "spermatogenesis associated 5-like 1"
species:10116 "Rattus norvegicus" [GO:0005524 "ATP binding"
evidence=IEA] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
RGD:1595990 GO:GO:0005524 GeneTree:ENSGT00700000104502
GO:GO:0017111 EMBL:CH473949 CTD:79029 OrthoDB:EOG42RD70
IPI:IPI00357915 RefSeq:NP_001103117.1 UniGene:Rn.151898
Ensembl:ENSRNOT00000043414 GeneID:691729 KEGG:rno:691729
UCSC:RGD:1595990 NextBio:743659 Uniprot:D4A2B7
Length = 747
Score = 191 (72.3 bits), Expect = 1.2e-26, Sum P(2) = 1.2e-26
Identities = 55/172 (31%), Positives = 79/172 (45%)
Query: 9 TELVTAFIRVVGSEFVQKYL--------GEGPRMVRDVFRLAKE---NSPXXXXXXXXXX 57
T+LV A R G+E + GE VR VF+ A+E P
Sbjct: 241 TQLVRAVAREAGAELLAVSAPALQGTRPGETEENVRRVFQRAQELASRGPSLLFLDEVDA 300
Query: 58 XXTKRFDAQTGADREVQRILLELLNQMDGFDQTTNVKVIMATNRADTLDPALLRPGRLDR 117
+R Q + R++ ++L +DG V V+ ATNR D LDPAL RPGR DR
Sbjct: 301 LCPRRGGPQRAPE---SRVVAQVLTLLDGIHGDREVVVVGATNRPDELDPALRRPGRFDR 357
Query: 118 KIEFPLPDRRQKRLVFSTITAKMNLSDEVDLEDYVARPDRISGADINAICQE 169
++ P +Q+ + IT+KM +S +DL GAD+ A+C+E
Sbjct: 358 EVIIGTPTLKQREAILGVITSKMPISSHIDLGLLAEMTVGYVGADLTALCRE 409
Score = 183 (69.5 bits), Expect = 1.2e-26, Sum P(2) = 1.2e-26
Identities = 36/87 (41%), Positives = 53/87 (60%)
Query: 223 NLQVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLVFSTITAKMNLSDEVDLEDY 282
++ +++ATNR D LD ALLRPGRLD+ + P PDR + + T M + V LE+
Sbjct: 616 SVMIVVATNRPDVLDDALLRPGRLDKMVYVPPPDREGRLSILKVCTNNMPIGLNVSLENL 675
Query: 283 VARPDRISGADINAICQEAGMHAVREN 309
A SGAD+ +C+EA + A++EN
Sbjct: 676 AAETCYFSGADLRNLCKEAALFALQEN 702
Score = 171 (65.3 bits), Expect = 1.0e-09, P = 1.0e-09
Identities = 44/131 (33%), Positives = 68/131 (51%)
Query: 199 PDRRQKRLVFSTITAKMNFMLNIGNLQVIMATNRADTLDPALLRPGRLDRKIEFPLPDRR 258
P R + V + + ++ + + V+ ATNR D LDPAL RPGR DR++ P +
Sbjct: 308 PQRAPESRVVAQVLTLLDGIHGDREVVVVGATNRPDELDPALRRPGRFDREVIIGTPTLK 367
Query: 259 QKRLVFSTITAKMNLSDEVDLEDYVARPDRISGADINAICQEAGMHAVREN-RYIVLPK- 316
Q+ + IT+KM +S +DL GAD+ A+C+EA A+ +N + PK
Sbjct: 368 QREAILGVITSKMPISSHIDLGLLAEMTVGYVGADLTALCREAATCALLKNEKNQNNPKI 427
Query: 317 ---DFEKGYKK 324
DF + +KK
Sbjct: 428 EETDFLEAFKK 438
Score = 170 (64.9 bits), Expect = 3.2e-15, Sum P(2) = 3.2e-15
Identities = 38/117 (32%), Positives = 58/117 (49%)
Query: 92 NVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLVFSTITAKMNLSDEVDLEDY 151
+V +++ATNR D LD ALLRPGRLD+ + P PDR + + T M + V LE+
Sbjct: 616 SVMIVVATNRPDVLDDALLRPGRLDKMVYVPPPDREGRLSILKVCTNNMPIGLNVSLENL 675
Query: 152 VARPDRISGADINAICQEVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLVF 208
A SGAD+ +C+E + + + L+ + ++ P K L F
Sbjct: 676 AAETCYFSGADLRNLCKEAALFALQENGLEATTVEQEHFTEALKTVKPSLTLKDLTF 732
Score = 125 (49.1 bits), Expect = 4.1e-10, Sum P(2) = 4.1e-10
Identities = 30/89 (33%), Positives = 44/89 (49%)
Query: 136 ITAKMNLSDEVDLEDYVARPDRISGADINAICQE---VIMATNRADTLDPALLRPGRLDR 192
++ +N D V + R + S + I +++ATNR D LD ALLRPGRLD+
Sbjct: 582 LSVLLNELDGVGVRTVERRGSKASQQECQEILSRSVMIVVATNRPDVLDDALLRPGRLDK 641
Query: 193 KIEFPLPDRRQKRLVFSTITAKMNFMLNI 221
+ P PDR + + T M LN+
Sbjct: 642 MVYVPPPDREGRLSILKVCTNNMPIGLNV 670
Score = 118 (46.6 bits), Expect = 6.3e-19, Sum P(2) = 6.3e-19
Identities = 23/46 (50%), Positives = 30/46 (65%)
Query: 170 VIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLVFSTITAKM 215
V+ ATNR D LDPAL RPGR DR++ P +Q+ + IT+KM
Sbjct: 335 VVGATNRPDELDPALRRPGRFDREVIIGTPTLKQREAILGVITSKM 380
Score = 97 (39.2 bits), Expect = 9.7e-17, Sum P(2) = 9.7e-17
Identities = 22/84 (26%), Positives = 40/84 (47%)
Query: 3 LCTSFDTELVTAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENSPXXXXXXXXXXXXTKR 62
L + T +F+ V G++ ++G+ +++ VFR A+ N+P R
Sbjct: 509 LVRALATSCHCSFVSVCGADLFSPFVGDSEKVLSQVFRQARANTPALVFLDEIDSVLGSR 568
Query: 63 FDAQTGADREVQRILLELLNQMDG 86
+G D +R+L LLN++DG
Sbjct: 569 SVGSSGCDAR-ERVLSVLLNELDG 591
>UNIPROTKB|E9PKD5 [details] [associations]
symbol:PSMC3 "26S protease regulatory subunit 6A"
species:9606 "Homo sapiens" [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GO:GO:0017111 EMBL:AC090559 HGNC:HGNC:9549 ChiTaRS:PSMC3
IPI:IPI00978735 ProteinModelPortal:E9PKD5 SMR:E9PKD5 PRIDE:E9PKD5
Ensembl:ENST00000524447 ArrayExpress:E9PKD5 Bgee:E9PKD5
Uniprot:E9PKD5
Length = 294
Score = 299 (110.3 bits), Expect = 1.5e-26, P = 1.5e-26
Identities = 59/116 (50%), Positives = 75/116 (64%)
Query: 2 LLCTSFDTELVTAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENSPXXXXXXXXXXXXTK 61
LL + + F+++ G + VQ ++G+G ++VRD F LAKE +P TK
Sbjct: 179 LLARACAAQTKATFLKLAGPQLVQMFIGDGAKLVRDAFALAKEKAPSIIFIDELDAIGTK 238
Query: 62 RFDAQTGADREVQRILLELLNQMDGFDQTTNVKVIMATNRADTLDPALLRPGRLDR 117
RFD++ DREVQR +LELLNQ+DGF T VKVI ATNR D LDPALLR GRLDR
Sbjct: 239 RFDSEKAGDREVQRTMLELLNQLDGFQPNTQVKVIAATNRVDILDPALLRSGRLDR 294
>UNIPROTKB|H0Y8B6 [details] [associations]
symbol:NVL "Nuclear valosin-containing protein-like"
species:9606 "Homo sapiens" [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005730 "nucleolus"
evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0016235
"aggresome" evidence=IDA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0005737 GO:GO:0005730 GO:GO:0016235
GO:GO:0017111 EMBL:AC092809 HGNC:HGNC:8070 ChiTaRS:NVL
Ensembl:ENST00000469968 Uniprot:H0Y8B6
Length = 739
Score = 248 (92.4 bits), Expect = 6.1e-19, P = 6.1e-19
Identities = 64/182 (35%), Positives = 94/182 (51%)
Query: 2 LLCTSFDTELVTAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENSPXXXXXXXXXXXXTK 61
LL + E FI V G E + Y+GE R VR VF+ AK ++P +
Sbjct: 513 LLAKAVANESGLNFISVKGPELLNMYVGESERAVRQVFQRAKNSAPCVIFFDEVDALCPR 572
Query: 62 RFDAQTGADREVQRILLELLNQMDGFDQTTNVKVIMATNRADTLDPALLRPGRLDRKIEF 121
R D +TGA R++ +LL +MDG + V ++ ATNR D +DPA+LRPGRLD+ +
Sbjct: 573 RSDRETGAS---VRVVNQLLTEMDGLEARQQVFIMAATNRPDIIDPAILRPGRLDKTLFV 629
Query: 122 PLPDRRQKRLVFSTIT---AKMNLSDEVDLEDYVA--RPDRISGADINAICQEVIMATNR 176
LP + + TIT K L +V+LE R D +GAD++A+ +E + R
Sbjct: 630 GLPPPADRLAILKTITKNGTKPPLDADVNLEAIAGDLRCDCYTGADLSALVREASICALR 689
Query: 177 AD 178
+
Sbjct: 690 QE 691
Score = 215 (80.7 bits), Expect = 3.6e-26, Sum P(2) = 3.6e-26
Identities = 56/176 (31%), Positives = 80/176 (45%)
Query: 2 LLCTSFDTELVTAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENSPXXXXXXXXXXXXTK 61
LL + EL ++V E V GE + +R++F A N+P K
Sbjct: 196 LLAHAIAGELDLPILKVAAPEIVSGVSGESEQKLRELFEQAVSNAPCIIFIDEIDAITPK 255
Query: 62 RFDAQTGADREVQRILLELLNQMDGFDQTTNVKVIMATNRADTLDPALLRPGRLDRKIEF 121
R A +R + LL ++ ++ T V VI ATNR D+LDPAL R GR DR+I
Sbjct: 256 REVASKDMERRIVAQLLTCMDDLNNVAATARVLVIGATNRPDSLDPALRRAGRFDREICL 315
Query: 122 PLPDRRQKRLVFSTITAKMNLSDEVDLEDYVARPDRISGADINAICQEVIM-ATNR 176
+PD + + T+ K+ L D GAD+ A+C+E M A NR
Sbjct: 316 GIPDEASRERILQTLCRKLRLPQAFDFCHLAHLTPGFVGADLMALCREAAMCAVNR 371
Score = 170 (64.9 bits), Expect = 1.3e-09, P = 1.3e-09
Identities = 56/185 (30%), Positives = 91/185 (49%)
Query: 142 LSDEVDLEDY-VARPDRISGADINAICQEVIMATNRADTLDPALLRPGRLDR---KIEFP 197
++ E+DL VA P+ +SG + Q++ +A + P ++ +D K E
Sbjct: 201 IAGELDLPILKVAAPEIVSGVSGESE-QKLRELFEQAVSNAPCIIFIDEIDAITPKREVA 259
Query: 198 LPDRRQKRLVFSTITAK--MNFMLNIGNLQVIMATNRADTLDPALLRPGRLDRKIEFPLP 255
D ++R+V +T +N + + VI ATNR D+LDPAL R GR DR+I +P
Sbjct: 260 SKDM-ERRIVAQLLTCMDDLNNVAATARVLVIGATNRPDSLDPALRRAGRFDREICLGIP 318
Query: 256 DRRQKRLVFSTITAKMNLSDEVDLEDYVARPDRISGADINAICQEAGMHAVRENRYIVLP 315
D + + T+ K+ L D GAD+ A+C+EA M AV NR ++
Sbjct: 319 DEASRERILQTLCRKLRLPQAFDFCHLAHLTPGFVGADLMALCREAAMCAV--NRVLMKL 376
Query: 316 KDFEK 320
++ +K
Sbjct: 377 QEQQK 381
Score = 150 (57.9 bits), Expect = 3.6e-26, Sum P(2) = 3.6e-26
Identities = 45/126 (35%), Positives = 68/126 (53%)
Query: 226 VIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLVFSTIT---AKMNLSDEVDLEDY 282
++ ATNR D +DPA+LRPGRLD+ + LP + + TIT K L +V+LE
Sbjct: 603 IMAATNRPDIIDPAILRPGRLDKTLFVGLPPPADRLAILKTITKNGTKPPLDADVNLEAI 662
Query: 283 VA--RPDRISGADINAICQEAGMHAVRENRYIVLPKDF-EKGYKKCAGMH---AVRENRY 336
R D +GAD++A+ +EA + A+R+ + K EKG K + H A ++ R
Sbjct: 663 AGDLRCDCYTGADLSALVREASICALRQE--MARQKSGNEKGELKVSHKHFEEAFKKVRS 720
Query: 337 IVLPKD 342
+ KD
Sbjct: 721 SISKKD 726
Score = 106 (42.4 bits), Expect = 1.4e-21, Sum P(2) = 1.4e-21
Identities = 26/68 (38%), Positives = 37/68 (54%)
Query: 170 VIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLVFSTIT---AKMNFMLNIGNLQV 226
++ ATNR D +DPA+LRPGRLD+ + LP + + TIT K ++ NL+
Sbjct: 603 IMAATNRPDIIDPAILRPGRLDKTLFVGLPPPADRLAILKTITKNGTKPPLDADV-NLEA 661
Query: 227 IMATNRAD 234
I R D
Sbjct: 662 IAGDLRCD 669
Score = 43 (20.2 bits), Expect = 2.3e-07, Sum P(2) = 2.3e-07
Identities = 14/40 (35%), Positives = 23/40 (57%)
Query: 126 RRQKRLVFSTITAKMNLSDEVDLED-YVARPDRISGADIN 164
R Q VFS I+++ L + +LED ++A+ R G + N
Sbjct: 30 RIQVEKVFSIISSEKELKNLTELEDEHLAKRAR-QGEEDN 68
>UNIPROTKB|E2RC37 [details] [associations]
symbol:SPATA5 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524 KO:K14575
GeneTree:ENSGT00700000104502 GO:GO:0017111 Gene3D:2.40.40.20
InterPro:IPR009010 SUPFAM:SSF50692 CTD:166378 OMA:NDIRPSA
EMBL:AAEX03011797 RefSeq:XP_540960.2 ProteinModelPortal:E2RC37
Ensembl:ENSCAFT00000006393 GeneID:483840 KEGG:cfa:483840
Uniprot:E2RC37
Length = 893
Score = 296 (109.3 bits), Expect = 4.7e-25, P = 4.7e-25
Identities = 60/164 (36%), Positives = 95/164 (57%)
Query: 15 FIRVVGSEFVQKYLGEGPRMVRDVFRLAKENSPXXXXXXXXXXXXTKRFDAQTGADREVQ 74
F+ + G E + KY+GE R VR++FR A+ SP +R + +GA
Sbjct: 689 FLAIKGPELMNKYVGESERAVREIFRKARAVSPSIIFFDELDALAIER-GSSSGAGNVAD 747
Query: 75 RILLELLNQMDGFDQTTNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLVFS 134
R+L +LL +MDG +Q +V ++ ATNR D +D AL+RPGR+DR I PLPD +R + +
Sbjct: 748 RVLAQLLTEMDGIEQLKDVTILAATNRPDRIDKALMRPGRIDRIIYVPLPDAATRREILN 807
Query: 135 TITAKMNLSDEVDLEDYVARPDRISGADINAICQEVIMATNRAD 178
M +S++V+L++ + + D SGA+I A+C+E + D
Sbjct: 808 LQFHSMPISNDVNLDELIFQTDTYSGAEIIAVCREAALLALEED 851
Score = 190 (71.9 bits), Expect = 4.2e-26, Sum P(2) = 4.2e-26
Identities = 37/103 (35%), Positives = 67/103 (65%)
Query: 207 VFSTITAKMNFMLNIGNLQVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLVFST 266
V + + +M+ + + ++ ++ ATNR D +D AL+RPGR+DR I PLPD +R + +
Sbjct: 749 VLAQLLTEMDGIEQLKDVTILAATNRPDRIDKALMRPGRIDRIIYVPLPDAATRREILNL 808
Query: 267 ITAKMNLSDEVDLEDYVARPDRISGADINAICQEAGMHAVREN 309
M +S++V+L++ + + D SGA+I A+C+EA + A+ E+
Sbjct: 809 QFHSMPISNDVNLDELIFQTDTYSGAEIIAVCREAALLALEED 851
Score = 181 (68.8 bits), Expect = 4.2e-26, Sum P(2) = 4.2e-26
Identities = 52/176 (29%), Positives = 79/176 (44%)
Query: 12 VTAFIRVV-GSEFVQKYLGEGPRMVRDVFRLAKENSPXXXXXXXXXXXXTKRFDAQTGAD 70
V A++ V+ G E + K+ GE +R +F A P KR AQ +
Sbjct: 411 VGAYVSVINGPEIISKFYGETEARLRQIFAEATLRHPSIIFIDELDALCPKREGAQNEVE 470
Query: 71 REVQRILLELLNQMDGFDQTTNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKR 130
+ V LL L++ + V V+ ATNR LD AL RPGR D++IE +P+ +
Sbjct: 471 KRVVASLLTLMDGIGSEGSEGQVLVLGATNRPHALDAALRRPGRFDKEIEIGVPNAADRL 530
Query: 131 LVFSTITAKM-NLSDEVDLEDYVARPDRISGADINAICQEV-IMATNRADTLDPAL 184
+ + ++ +L EV+L GAD+ A+C E + A R P L
Sbjct: 531 DILQKLLQRVPHLLTEVELLQLANSAHGYVGADLKALCNEAGLYALRRVLNKQPNL 586
Score = 154 (59.3 bits), Expect = 1.0e-07, P = 1.0e-07
Identities = 44/138 (31%), Positives = 71/138 (51%)
Query: 203 QKRLVFSTITAK--MNFMLNIGNLQVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQK 260
+KR+V S +T + + G + V+ ATNR LD AL RPGR D++IE +P+ +
Sbjct: 470 EKRVVASLLTLMDGIGSEGSEGQVLVLGATNRPHALDAALRRPGRFDKEIEIGVPNAADR 529
Query: 261 RLVFSTITAKM-NLSDEVDLEDYVARPDRISGADINAICQEAGMHAVRENRYIVLPKDFE 319
+ + ++ +L EV+L GAD+ A+C EAG++A+R VL K
Sbjct: 530 LDILQKLLQRVPHLLTEVELLQLANSAHGYVGADLKALCNEAGLYALRR----VLNKQPN 585
Query: 320 KGYKKCAGMHAVRENRYI 337
K AG+ + N ++
Sbjct: 586 LSDSKMAGLVKITLNDFL 603
Score = 116 (45.9 bits), Expect = 2.9e-18, Sum P(2) = 2.9e-18
Identities = 35/117 (29%), Positives = 57/117 (48%)
Query: 170 VIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLVFSTITAKMNFMLNIGNLQVIMA 229
++ ATNR D +D AL+RPGR+DR I PLPD +R + + M ++ ++I
Sbjct: 768 ILAATNRPDRIDKALMRPGRIDRIIYVPLPDAATRREILNLQFHSMPISNDVNLDELIFQ 827
Query: 230 TNRADTLDP-ALLRPGRL---DRKIEFPLPDRRQKRLVFSTITAKMNLSDEVDLEDY 282
T+ + A+ R L + I+ RR ST+T +++ S E+Y
Sbjct: 828 TDTYSGAEIIAVCREAALLALEEDIQANSITRRHFTRALSTVTPRISKSLRRFYEEY 884
>UNIPROTKB|O15381 [details] [associations]
symbol:NVL "Nuclear valosin-containing protein-like"
species:9606 "Homo sapiens" [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005730 "nucleolus"
evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0016235
"aggresome" evidence=IDA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0005737 GO:GO:0005730 GO:GO:0016235
eggNOG:COG0464 HOGENOM:HOG000223225 GO:GO:0017111 KO:K14571
EMBL:U68140 EMBL:U78772 EMBL:AK297396 EMBL:AK298244 EMBL:AC092809
EMBL:BC012105 IPI:IPI00006197 IPI:IPI00183080 IPI:IPI00185801
RefSeq:NP_001230075.1 RefSeq:NP_001230076.1 RefSeq:NP_002524.2
RefSeq:NP_996671.1 UniGene:Hs.497867 PDB:2X8A PDBsum:2X8A
ProteinModelPortal:O15381 SMR:O15381 IntAct:O15381
MINT:MINT-1423251 STRING:O15381 PhosphoSite:O15381
SWISS-2DPAGE:O15381 PaxDb:O15381 PRIDE:O15381 DNASU:4931
Ensembl:ENST00000281701 Ensembl:ENST00000340871
Ensembl:ENST00000391875 Ensembl:ENST00000469075 GeneID:4931
KEGG:hsa:4931 UCSC:uc001hok.3 CTD:4931 GeneCards:GC01M224416
HGNC:HGNC:8070 HPA:HPA028207 MIM:602426 neXtProt:NX_O15381
PharmGKB:PA31857 HOVERGEN:HBG001226 InParanoid:O15381 OMA:NDMTLKE
OrthoDB:EOG4ZPDTN PhylomeDB:O15381 ChiTaRS:NVL
EvolutionaryTrace:O15381 GenomeRNAi:4931 NextBio:19001
ArrayExpress:O15381 Bgee:O15381 CleanEx:HS_NVL
Genevestigator:O15381 GermOnline:ENSG00000143748 Uniprot:O15381
Length = 856
Score = 248 (92.4 bits), Expect = 7.8e-19, P = 7.8e-19
Identities = 64/182 (35%), Positives = 94/182 (51%)
Query: 2 LLCTSFDTELVTAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENSPXXXXXXXXXXXXTK 61
LL + E FI V G E + Y+GE R VR VF+ AK ++P +
Sbjct: 630 LLAKAVANESGLNFISVKGPELLNMYVGESERAVRQVFQRAKNSAPCVIFFDEVDALCPR 689
Query: 62 RFDAQTGADREVQRILLELLNQMDGFDQTTNVKVIMATNRADTLDPALLRPGRLDRKIEF 121
R D +TGA R++ +LL +MDG + V ++ ATNR D +DPA+LRPGRLD+ +
Sbjct: 690 RSDRETGAS---VRVVNQLLTEMDGLEARQQVFIMAATNRPDIIDPAILRPGRLDKTLFV 746
Query: 122 PLPDRRQKRLVFSTIT---AKMNLSDEVDLEDYVA--RPDRISGADINAICQEVIMATNR 176
LP + + TIT K L +V+LE R D +GAD++A+ +E + R
Sbjct: 747 GLPPPADRLAILKTITKNGTKPPLDADVNLEAIAGDLRCDCYTGADLSALVREASICALR 806
Query: 177 AD 178
+
Sbjct: 807 QE 808
Score = 215 (80.7 bits), Expect = 5.7e-26, Sum P(2) = 5.7e-26
Identities = 56/176 (31%), Positives = 80/176 (45%)
Query: 2 LLCTSFDTELVTAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENSPXXXXXXXXXXXXTK 61
LL + EL ++V E V GE + +R++F A N+P K
Sbjct: 313 LLAHAIAGELDLPILKVAAPEIVSGVSGESEQKLRELFEQAVSNAPCIIFIDEIDAITPK 372
Query: 62 RFDAQTGADREVQRILLELLNQMDGFDQTTNVKVIMATNRADTLDPALLRPGRLDRKIEF 121
R A +R + LL ++ ++ T V VI ATNR D+LDPAL R GR DR+I
Sbjct: 373 REVASKDMERRIVAQLLTCMDDLNNVAATARVLVIGATNRPDSLDPALRRAGRFDREICL 432
Query: 122 PLPDRRQKRLVFSTITAKMNLSDEVDLEDYVARPDRISGADINAICQEVIM-ATNR 176
+PD + + T+ K+ L D GAD+ A+C+E M A NR
Sbjct: 433 GIPDEASRERILQTLCRKLRLPQAFDFCHLAHLTPGFVGADLMALCREAAMCAVNR 488
Score = 170 (64.9 bits), Expect = 1.6e-09, P = 1.6e-09
Identities = 56/185 (30%), Positives = 91/185 (49%)
Query: 142 LSDEVDLEDY-VARPDRISGADINAICQEVIMATNRADTLDPALLRPGRLDR---KIEFP 197
++ E+DL VA P+ +SG + Q++ +A + P ++ +D K E
Sbjct: 318 IAGELDLPILKVAAPEIVSGVSGESE-QKLRELFEQAVSNAPCIIFIDEIDAITPKREVA 376
Query: 198 LPDRRQKRLVFSTITAK--MNFMLNIGNLQVIMATNRADTLDPALLRPGRLDRKIEFPLP 255
D ++R+V +T +N + + VI ATNR D+LDPAL R GR DR+I +P
Sbjct: 377 SKDM-ERRIVAQLLTCMDDLNNVAATARVLVIGATNRPDSLDPALRRAGRFDREICLGIP 435
Query: 256 DRRQKRLVFSTITAKMNLSDEVDLEDYVARPDRISGADINAICQEAGMHAVRENRYIVLP 315
D + + T+ K+ L D GAD+ A+C+EA M AV NR ++
Sbjct: 436 DEASRERILQTLCRKLRLPQAFDFCHLAHLTPGFVGADLMALCREAAMCAV--NRVLMKL 493
Query: 316 KDFEK 320
++ +K
Sbjct: 494 QEQQK 498
Score = 150 (57.9 bits), Expect = 5.7e-26, Sum P(2) = 5.7e-26
Identities = 45/126 (35%), Positives = 68/126 (53%)
Query: 226 VIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLVFSTIT---AKMNLSDEVDLEDY 282
++ ATNR D +DPA+LRPGRLD+ + LP + + TIT K L +V+LE
Sbjct: 720 IMAATNRPDIIDPAILRPGRLDKTLFVGLPPPADRLAILKTITKNGTKPPLDADVNLEAI 779
Query: 283 VA--RPDRISGADINAICQEAGMHAVRENRYIVLPKDF-EKGYKKCAGMH---AVRENRY 336
R D +GAD++A+ +EA + A+R+ + K EKG K + H A ++ R
Sbjct: 780 AGDLRCDCYTGADLSALVREASICALRQE--MARQKSGNEKGELKVSHKHFEEAFKKVRS 837
Query: 337 IVLPKD 342
+ KD
Sbjct: 838 SISKKD 843
Score = 106 (42.4 bits), Expect = 2.2e-21, Sum P(2) = 2.2e-21
Identities = 26/68 (38%), Positives = 37/68 (54%)
Query: 170 VIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLVFSTIT---AKMNFMLNIGNLQV 226
++ ATNR D +DPA+LRPGRLD+ + LP + + TIT K ++ NL+
Sbjct: 720 IMAATNRPDIIDPAILRPGRLDKTLFVGLPPPADRLAILKTITKNGTKPPLDADV-NLEA 778
Query: 227 IMATNRAD 234
I R D
Sbjct: 779 IAGDLRCD 786
Score = 43 (20.2 bits), Expect = 3.4e-07, Sum P(2) = 3.4e-07
Identities = 14/40 (35%), Positives = 23/40 (57%)
Query: 126 RRQKRLVFSTITAKMNLSDEVDLED-YVARPDRISGADIN 164
R Q VFS I+++ L + +LED ++A+ R G + N
Sbjct: 56 RIQVEKVFSIISSEKELKNLTELEDEHLAKRAR-QGEEDN 94
>RGD|1311270 [details] [associations]
symbol:Nvl "nuclear VCP-like" species:10116 "Rattus norvegicus"
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=ISO] [GO:0005730 "nucleolus" evidence=IEA;ISO] [GO:0005737
"cytoplasm" evidence=IEA;ISO] [GO:0016235 "aggresome"
evidence=IEA;ISO] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
RGD:1311270 GO:GO:0005524 GO:GO:0005737 GO:GO:0005730 GO:GO:0016235
GO:GO:0017111 KO:K14571 EMBL:CH473985 CTD:4931 OMA:NDMTLKE
OrthoDB:EOG4ZPDTN GeneTree:ENSGT00570000079239 IPI:IPI00371541
RefSeq:NP_001099450.1 UniGene:Rn.8896 Ensembl:ENSRNOT00000004927
GeneID:289323 KEGG:rno:289323 UCSC:RGD:1311270 NextBio:629627
Uniprot:D3ZTY9
Length = 855
Score = 256 (95.2 bits), Expect = 1.7e-20, P = 1.7e-20
Identities = 65/182 (35%), Positives = 95/182 (52%)
Query: 2 LLCTSFDTELVTAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENSPXXXXXXXXXXXXTK 61
LL + E FI V G E + Y+GE R VR VF+ AK ++P +
Sbjct: 629 LLAKAVANESGLNFISVKGPELLNMYVGESERAVRQVFQRAKNSAPCVIFFDEVDALCPR 688
Query: 62 RFDAQTGADREVQRILLELLNQMDGFDQTTNVKVIMATNRADTLDPALLRPGRLDRKIEF 121
R D +TGA R++ +LL +MDG + V ++ ATNR D +DPA+LRPGRLD+ +
Sbjct: 689 RSDRETGAS---VRVVNQLLTEMDGLETRQQVFILAATNRPDIIDPAILRPGRLDKTLFV 745
Query: 122 PLPDRRQKRLVFSTIT---AKMNLSDEVDLEDYVA--RPDRISGADINAICQEVIMATNR 176
LP + + TIT K L ++VDLE R D +GAD++A+ +E + R
Sbjct: 746 GLPPPADRVAILKTITKNGTKPPLDEDVDLEAIANDHRCDCYTGADLSALVREASLCALR 805
Query: 177 AD 178
+
Sbjct: 806 QE 807
Score = 209 (78.6 bits), Expect = 9.5e-26, Sum P(2) = 9.5e-26
Identities = 52/176 (29%), Positives = 81/176 (46%)
Query: 2 LLCTSFDTELVTAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENSPXXXXXXXXXXXXTK 61
LL + EL ++V E V GE + +RD+F A N+P K
Sbjct: 312 LLAHAIAGELDLPILKVAAPEIVSGVSGESEQKLRDLFDQAVSNAPCIVFIDEIDAITPK 371
Query: 62 RFDAQTGADREVQRILLELLNQMDGFDQTTNVKVIMATNRADTLDPALLRPGRLDRKIEF 121
R A +R + LL ++ ++ T V V+ ATNR D+LDPAL R GR DR++
Sbjct: 372 REVASKDMERRIVAQLLTCMDDLNNVAATARVLVVGATNRPDSLDPALRRAGRFDREVCL 431
Query: 122 PLPDRRQKRLVFSTITAKMNLSDEVDLEDYVARPDRISGADINAICQEV-IMATNR 176
+PD + + T+ K+ L + + GAD+ A+C+E + A +R
Sbjct: 432 GIPDEASRERILQTLCRKLRLPETFNFSHLAHLTPGFVGADLMALCREAAVCAVHR 487
Score = 160 (61.4 bits), Expect = 2.1e-08, P = 2.1e-08
Identities = 49/171 (28%), Positives = 85/171 (49%)
Query: 142 LSDEVDLEDY-VARPDRISGADINAICQEVIMATNRADTLDPALLRPGRLDR---KIEFP 197
++ E+DL VA P+ +SG + Q++ ++A + P ++ +D K E
Sbjct: 317 IAGELDLPILKVAAPEIVSGVSGESE-QKLRDLFDQAVSNAPCIVFIDEIDAITPKREVA 375
Query: 198 LPDRRQKRLVFSTITAK--MNFMLNIGNLQVIMATNRADTLDPALLRPGRLDRKIEFPLP 255
D ++R+V +T +N + + V+ ATNR D+LDPAL R GR DR++ +P
Sbjct: 376 SKDM-ERRIVAQLLTCMDDLNNVAATARVLVVGATNRPDSLDPALRRAGRFDREVCLGIP 434
Query: 256 DRRQKRLVFSTITAKMNLSDEVDLEDYVARPDRISGADINAICQEAGMHAV 306
D + + T+ K+ L + + GAD+ A+C+EA + AV
Sbjct: 435 DEASRERILQTLCRKLRLPETFNFSHLAHLTPGFVGADLMALCREAAVCAV 485
Score = 155 (59.6 bits), Expect = 9.5e-26, Sum P(2) = 9.5e-26
Identities = 43/126 (34%), Positives = 67/126 (53%)
Query: 226 VIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLVFSTIT---AKMNLSDEVDLEDY 282
++ ATNR D +DPA+LRPGRLD+ + LP + + TIT K L ++VDLE
Sbjct: 719 ILAATNRPDIIDPAILRPGRLDKTLFVGLPPPADRVAILKTITKNGTKPPLDEDVDLEAI 778
Query: 283 VA--RPDRISGADINAICQEAGMHAVREN-----------RYIVLPKDFEKGYKKCAGMH 329
R D +GAD++A+ +EA + A+R+ V K FE+ ++K
Sbjct: 779 ANDHRCDCYTGADLSALVREASLCALRQEITGQKNGIGTAELTVSHKHFEEAFRKVKPSI 838
Query: 330 AVRENR 335
+V++ R
Sbjct: 839 SVKDQR 844
Score = 105 (42.0 bits), Expect = 1.6e-20, Sum P(2) = 1.6e-20
Identities = 20/43 (46%), Positives = 28/43 (65%)
Query: 170 VIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLVFSTIT 212
++ ATNR D +DPA+LRPGRLD+ + LP + + TIT
Sbjct: 719 ILAATNRPDIIDPAILRPGRLDKTLFVGLPPPADRVAILKTIT 761
>UNIPROTKB|E2QY79 [details] [associations]
symbol:NVL "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GO:GO:0017111 GeneTree:ENSGT00570000079239 EMBL:AAEX03005293
EMBL:AAEX03005294 EMBL:AAEX03005295 EMBL:AAEX03005296
Ensembl:ENSCAFT00000025949 NextBio:20855189 Uniprot:E2QY79
Length = 851
Score = 255 (94.8 bits), Expect = 4.3e-20, P = 4.3e-20
Identities = 65/186 (34%), Positives = 97/186 (52%)
Query: 2 LLCTSFDTELVTAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENSPXXXXXXXXXXXXTK 61
LL + E FI V G E + Y+GE R VR VF+ A+ ++P +
Sbjct: 624 LLAKAVANESGLNFISVKGPELLNMYVGESERAVRQVFQRARSSAPCVIFFDEVDALCPR 683
Query: 62 RFDAQTGADREVQRILLELLNQMDGFDQTTNVKVIMATNRADTLDPALLRPGRLDRKIEF 121
R D +TGA R++ +LL +MDG + V ++ ATNR D +DPA+LRPGRLD+ +
Sbjct: 684 RSDRETGAS---VRVVNQLLTEMDGLEARQQVFIMAATNRPDIIDPAILRPGRLDKTLFV 740
Query: 122 PLPDRRQKRLVFSTIT---AKMNLSDEVDLEDYVA--RPDRISGADINAICQEVIMATNR 176
LP + + TIT + L +V+LE A R D SGAD++A+ +E + R
Sbjct: 741 GLPPPADRLAILKTITKNGTRPPLDADVNLEALAADLRCDCYSGADLSALVREASICALR 800
Query: 177 ADTLDP 182
+ + P
Sbjct: 801 QEMMRP 806
Score = 207 (77.9 bits), Expect = 2.1e-25, Sum P(2) = 2.1e-25
Identities = 54/176 (30%), Positives = 81/176 (46%)
Query: 2 LLCTSFDTELVTAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENSPXXXXXXXXXXXXTK 61
LL + EL ++V +E V GE + +R++F A N+P K
Sbjct: 307 LLAHAIAGELDLPILKVAATEVVSGVSGESEQKLRELFEQAVSNAPCVLFIDEIDAITPK 366
Query: 62 RFDAQTGADREVQRILLELLNQMDGFDQTTNVKVIMATNRADTLDPALLRPGRLDRKIEF 121
R A +R + LL ++ ++ T V VI ATNR D+LDPAL R GR DR+I
Sbjct: 367 REVASKDMERRIVAQLLTCMDDLNTTAATARVLVIGATNRPDSLDPALRRAGRFDREICL 426
Query: 122 PLPDRRQKRLVFSTITAKMNLSDEVDLEDYVARPDRISGADINAICQEVIM-ATNR 176
+PD + + T+ K+ L + GAD+ A+C+E M A +R
Sbjct: 427 GIPDEASRERILQTLCRKLRLPETFPFRHLAHLTPGFVGADLMALCREAAMCAVSR 482
Score = 157 (60.3 bits), Expect = 4.5e-08, P = 4.5e-08
Identities = 52/171 (30%), Positives = 81/171 (47%)
Query: 142 LSDEVDLEDY-VARPDRISGADINAICQEVIMATNRADTLDPALLRPGRLDR---KIEFP 197
++ E+DL VA + +SG + Q++ +A + P +L +D K E
Sbjct: 312 IAGELDLPILKVAATEVVSGVSGESE-QKLRELFEQAVSNAPCVLFIDEIDAITPKREVA 370
Query: 198 LPDRRQKRLVFSTITAK--MNFMLNIGNLQVIMATNRADTLDPALLRPGRLDRKIEFPLP 255
D ++R+V +T +N + VI ATNR D+LDPAL R GR DR+I +P
Sbjct: 371 SKDM-ERRIVAQLLTCMDDLNTTAATARVLVIGATNRPDSLDPALRRAGRFDREICLGIP 429
Query: 256 DRRQKRLVFSTITAKMNLSDEVDLEDYVARPDRISGADINAICQEAGMHAV 306
D + + T+ K+ L + GAD+ A+C+EA M AV
Sbjct: 430 DEASRERILQTLCRKLRLPETFPFRHLAHLTPGFVGADLMALCREAAMCAV 480
Score = 154 (59.3 bits), Expect = 2.1e-25, Sum P(2) = 2.1e-25
Identities = 41/110 (37%), Positives = 64/110 (58%)
Query: 226 VIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLVFSTIT---AKMNLSDEVDLEDY 282
++ ATNR D +DPA+LRPGRLD+ + LP + + TIT + L +V+LE
Sbjct: 714 IMAATNRPDIIDPAILRPGRLDKTLFVGLPPPADRLAILKTITKNGTRPPLDADVNLEAL 773
Query: 283 VA--RPDRISGADINAICQEAGMHAVRENRYIVLPKDF-EKGYKKCAGMH 329
A R D SGAD++A+ +EA + A+R+ ++ PK ++G K + H
Sbjct: 774 AADLRCDCYSGADLSALVREASICALRQE--MMRPKGGGDRGELKVSQKH 821
Score = 106 (42.4 bits), Expect = 2.2e-20, Sum P(2) = 2.2e-20
Identities = 26/67 (38%), Positives = 37/67 (55%)
Query: 170 VIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLVFSTITAK-MNFMLNIG-NLQVI 227
++ ATNR D +DPA+LRPGRLD+ + LP + + TIT L+ NL+ +
Sbjct: 714 IMAATNRPDIIDPAILRPGRLDKTLFVGLPPPADRLAILKTITKNGTRPPLDADVNLEAL 773
Query: 228 MATNRAD 234
A R D
Sbjct: 774 AADLRCD 780
Score = 47 (21.6 bits), Expect = 4.6e-08, Sum P(2) = 4.6e-08
Identities = 19/59 (32%), Positives = 29/59 (49%)
Query: 126 RRQKRLVFSTITAKMNLSDEVDLED-YVARPDRISGADINAICQEVIMA-TNRADTLDP 182
R Q VFS IT++ + D LED ++A+ R G + N + + +N D DP
Sbjct: 56 RIQVDKVFSIITSEKEVKDLTALEDEHLAKRAR-QGEEDNEYTESYSDSDSNMEDYPDP 113
>UNIPROTKB|J9P5D7 [details] [associations]
symbol:NVL "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GO:GO:0017111 OMA:NDMTLKE GeneTree:ENSGT00570000079239
EMBL:AAEX03005293 EMBL:AAEX03005294 EMBL:AAEX03005295
EMBL:AAEX03005296 Ensembl:ENSCAFT00000049264 Uniprot:J9P5D7
Length = 855
Score = 255 (94.8 bits), Expect = 4.3e-20, P = 4.3e-20
Identities = 65/186 (34%), Positives = 97/186 (52%)
Query: 2 LLCTSFDTELVTAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENSPXXXXXXXXXXXXTK 61
LL + E FI V G E + Y+GE R VR VF+ A+ ++P +
Sbjct: 629 LLAKAVANESGLNFISVKGPELLNMYVGESERAVRQVFQRARSSAPCVIFFDEVDALCPR 688
Query: 62 RFDAQTGADREVQRILLELLNQMDGFDQTTNVKVIMATNRADTLDPALLRPGRLDRKIEF 121
R D +TGA R++ +LL +MDG + V ++ ATNR D +DPA+LRPGRLD+ +
Sbjct: 689 RSDRETGAS---VRVVNQLLTEMDGLEARQQVFIMAATNRPDIIDPAILRPGRLDKTLFV 745
Query: 122 PLPDRRQKRLVFSTIT---AKMNLSDEVDLEDYVA--RPDRISGADINAICQEVIMATNR 176
LP + + TIT + L +V+LE A R D SGAD++A+ +E + R
Sbjct: 746 GLPPPADRLAILKTITKNGTRPPLDADVNLEALAADLRCDCYSGADLSALVREASICALR 805
Query: 177 ADTLDP 182
+ + P
Sbjct: 806 QEMMRP 811
Score = 207 (77.9 bits), Expect = 2.2e-25, Sum P(2) = 2.2e-25
Identities = 54/176 (30%), Positives = 81/176 (46%)
Query: 2 LLCTSFDTELVTAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENSPXXXXXXXXXXXXTK 61
LL + EL ++V +E V GE + +R++F A N+P K
Sbjct: 307 LLAHAIAGELDLPILKVAATEVVSGVSGESEQKLRELFEQAVSNAPCVLFIDEIDAITPK 366
Query: 62 RFDAQTGADREVQRILLELLNQMDGFDQTTNVKVIMATNRADTLDPALLRPGRLDRKIEF 121
R A +R + LL ++ ++ T V VI ATNR D+LDPAL R GR DR+I
Sbjct: 367 REVASKDMERRIVAQLLTCMDDLNTTAATARVLVIGATNRPDSLDPALRRAGRFDREICL 426
Query: 122 PLPDRRQKRLVFSTITAKMNLSDEVDLEDYVARPDRISGADINAICQEVIM-ATNR 176
+PD + + T+ K+ L + GAD+ A+C+E M A +R
Sbjct: 427 GIPDEASRERILQTLCRKLRLPETFPFRHLAHLTPGFVGADLMALCREAAMCAVSR 482
Score = 157 (60.3 bits), Expect = 4.5e-08, P = 4.5e-08
Identities = 52/171 (30%), Positives = 81/171 (47%)
Query: 142 LSDEVDLEDY-VARPDRISGADINAICQEVIMATNRADTLDPALLRPGRLDR---KIEFP 197
++ E+DL VA + +SG + Q++ +A + P +L +D K E
Sbjct: 312 IAGELDLPILKVAATEVVSGVSGESE-QKLRELFEQAVSNAPCVLFIDEIDAITPKREVA 370
Query: 198 LPDRRQKRLVFSTITAK--MNFMLNIGNLQVIMATNRADTLDPALLRPGRLDRKIEFPLP 255
D ++R+V +T +N + VI ATNR D+LDPAL R GR DR+I +P
Sbjct: 371 SKDM-ERRIVAQLLTCMDDLNTTAATARVLVIGATNRPDSLDPALRRAGRFDREICLGIP 429
Query: 256 DRRQKRLVFSTITAKMNLSDEVDLEDYVARPDRISGADINAICQEAGMHAV 306
D + + T+ K+ L + GAD+ A+C+EA M AV
Sbjct: 430 DEASRERILQTLCRKLRLPETFPFRHLAHLTPGFVGADLMALCREAAMCAV 480
Score = 154 (59.3 bits), Expect = 2.2e-25, Sum P(2) = 2.2e-25
Identities = 41/110 (37%), Positives = 64/110 (58%)
Query: 226 VIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLVFSTIT---AKMNLSDEVDLEDY 282
++ ATNR D +DPA+LRPGRLD+ + LP + + TIT + L +V+LE
Sbjct: 719 IMAATNRPDIIDPAILRPGRLDKTLFVGLPPPADRLAILKTITKNGTRPPLDADVNLEAL 778
Query: 283 VA--RPDRISGADINAICQEAGMHAVRENRYIVLPKDF-EKGYKKCAGMH 329
A R D SGAD++A+ +EA + A+R+ ++ PK ++G K + H
Sbjct: 779 AADLRCDCYSGADLSALVREASICALRQE--MMRPKGGGDRGELKVSQKH 826
Score = 106 (42.4 bits), Expect = 2.2e-20, Sum P(2) = 2.2e-20
Identities = 26/67 (38%), Positives = 37/67 (55%)
Query: 170 VIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLVFSTITAK-MNFMLNIG-NLQVI 227
++ ATNR D +DPA+LRPGRLD+ + LP + + TIT L+ NL+ +
Sbjct: 719 IMAATNRPDIIDPAILRPGRLDKTLFVGLPPPADRLAILKTITKNGTRPPLDADVNLEAL 778
Query: 228 MATNRAD 234
A R D
Sbjct: 779 AADLRCD 785
Score = 47 (21.6 bits), Expect = 4.7e-08, Sum P(2) = 4.7e-08
Identities = 19/59 (32%), Positives = 29/59 (49%)
Query: 126 RRQKRLVFSTITAKMNLSDEVDLED-YVARPDRISGADINAICQEVIMA-TNRADTLDP 182
R Q VFS IT++ + D LED ++A+ R G + N + + +N D DP
Sbjct: 56 RIQVDKVFSIITSEKEVKDLTALEDEHLAKRAR-QGEEDNEYTESYSDSDSNMEDYPDP 113
>UNIPROTKB|F1MIM8 [details] [associations]
symbol:NVL "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0016235 "aggresome" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0005730 "nucleolus" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GO:GO:0005737 GO:GO:0005730 GO:GO:0016235 GO:GO:0017111 OMA:NDMTLKE
GeneTree:ENSGT00570000079239 EMBL:DAAA02042637 EMBL:DAAA02042638
IPI:IPI00715498 Ensembl:ENSBTAT00000047473 Uniprot:F1MIM8
Length = 855
Score = 238 (88.8 bits), Expect = 1.9e-17, P = 1.9e-17
Identities = 62/173 (35%), Positives = 90/173 (52%)
Query: 2 LLCTSFDTELVTAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENSPXXXXXXXXXXXXTK 61
LL + E FI V G E + Y+GE R VR VF+ AK ++P +
Sbjct: 629 LLAKAVANESGLNFISVKGPELLNMYVGESERAVRQVFQRAKNSAPCVIFFDEVDALCPR 688
Query: 62 RFDAQTGADREVQRILLELLNQMDGFDQTTNVKVIMATNRADTLDPALLRPGRLDRKIEF 121
R +TGA R++ +LL +MDG + V ++ ATNR D +DPA+LRPGRLD+ +
Sbjct: 689 RSARETGAS---VRVVNQLLTEMDGLETRQQVFIMAATNRPDIIDPAILRPGRLDKTLFV 745
Query: 122 PLPDRRQKRLVFSTIT---AKMNLSDEVDLEDYVA--RPDRISGADINAICQE 169
LP + + TIT K L +V+LE R D +GAD++A+ +E
Sbjct: 746 GLPPPADRLAILKTITKNGTKPPLDADVNLEAIAGDLRCDCYTGADLSALVRE 798
Score = 211 (79.3 bits), Expect = 4.6e-25, Sum P(2) = 4.6e-25
Identities = 54/176 (30%), Positives = 81/176 (46%)
Query: 2 LLCTSFDTELVTAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENSPXXXXXXXXXXXXTK 61
LL + EL ++V +E V GE + +R++F A ++P K
Sbjct: 312 LLAHAIAGELDLPILKVAATEIVSGVSGESEQKLRELFEQAVSSAPCILFIDEIDAITPK 371
Query: 62 RFDAQTGADREVQRILLELLNQMDGFDQTTNVKVIMATNRADTLDPALLRPGRLDRKIEF 121
R A +R + LL ++ ++ T V VI ATNR D+LDPAL R GR DR+I
Sbjct: 372 REIASKDMERRIVAQLLTCMDDLNNVAATARVLVIGATNRPDSLDPALRRAGRFDREICL 431
Query: 122 PLPDRRQKRLVFSTITAKMNLSDEVDLEDYVARPDRISGADINAICQEVIM-ATNR 176
+PD + + T+ K+ L + GAD+ A+C+E M A NR
Sbjct: 432 GIPDEASRERILQTLCRKLRLPETFHFRHLAHLTPGFVGADLMALCREAAMCAVNR 487
Score = 163 (62.4 bits), Expect = 9.7e-09, P = 9.7e-09
Identities = 54/178 (30%), Positives = 86/178 (48%)
Query: 142 LSDEVDLEDY-VARPDRISGADINAICQEVIMATNRADTLDPALLRPGRLDR---KIEFP 197
++ E+DL VA + +SG + Q++ +A + P +L +D K E
Sbjct: 317 IAGELDLPILKVAATEIVSGVSGESE-QKLRELFEQAVSSAPCILFIDEIDAITPKREIA 375
Query: 198 LPDRRQKRLVFSTITAK--MNFMLNIGNLQVIMATNRADTLDPALLRPGRLDRKIEFPLP 255
D ++R+V +T +N + + VI ATNR D+LDPAL R GR DR+I +P
Sbjct: 376 SKDM-ERRIVAQLLTCMDDLNNVAATARVLVIGATNRPDSLDPALRRAGRFDREICLGIP 434
Query: 256 DRRQKRLVFSTITAKMNLSDEVDLEDYVARPDRISGADINAICQEAGMHAVRENRYIV 313
D + + T+ K+ L + GAD+ A+C+EA M AV NR ++
Sbjct: 435 DEASRERILQTLCRKLRLPETFHFRHLAHLTPGFVGADLMALCREAAMCAV--NRVLM 490
Score = 146 (56.5 bits), Expect = 4.6e-25, Sum P(2) = 4.6e-25
Identities = 40/110 (36%), Positives = 61/110 (55%)
Query: 226 VIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLVFSTIT---AKMNLSDEVDLEDY 282
++ ATNR D +DPA+LRPGRLD+ + LP + + TIT K L +V+LE
Sbjct: 719 IMAATNRPDIIDPAILRPGRLDKTLFVGLPPPADRLAILKTITKNGTKPPLDADVNLEAI 778
Query: 283 VA--RPDRISGADINAICQEAGMHAVRENRYIVLPKD-FEKGYKKCAGMH 329
R D +GAD++A+ +EA + A+++ + K EKG K + H
Sbjct: 779 AGDLRCDCYTGADLSALVREASICALKQE--MARQKSGSEKGELKISQKH 826
Score = 106 (42.4 bits), Expect = 7.0e-21, Sum P(2) = 7.0e-21
Identities = 26/68 (38%), Positives = 37/68 (54%)
Query: 170 VIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLVFSTIT---AKMNFMLNIGNLQV 226
++ ATNR D +DPA+LRPGRLD+ + LP + + TIT K ++ NL+
Sbjct: 719 IMAATNRPDIIDPAILRPGRLDKTLFVGLPPPADRLAILKTITKNGTKPPLDADV-NLEA 777
Query: 227 IMATNRAD 234
I R D
Sbjct: 778 IAGDLRCD 785
Score = 45 (20.9 bits), Expect = 6.0e-07, Sum P(2) = 6.0e-07
Identities = 17/58 (29%), Positives = 28/58 (48%)
Query: 126 RRQKRLVFSTITAKMNLSDEVDLED-YVARPDRISGADINAICQEVIMATNRADTLDP 182
R Q VFS I+++ D +LED ++A+ R G + N + ++ D DP
Sbjct: 56 RIQVEKVFSIISSEKEHKDLAELEDEHLAKRAR-HGEEDNEYTESYSDDSSMEDYPDP 112
>MGI|MGI:1914709 [details] [associations]
symbol:Nvl "nuclear VCP-like" species:10090 "Mus musculus"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0008150 "biological_process" evidence=ND] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 MGI:MGI:1914709
GO:GO:0005524 GO:GO:0005737 GO:GO:0005730 GO:GO:0016235
eggNOG:COG0464 HOGENOM:HOG000223225 GO:GO:0017111 KO:K14571
CTD:4931 HOVERGEN:HBG001226 OMA:NDMTLKE OrthoDB:EOG4ZPDTN
EMBL:AK004676 EMBL:AK054502 EMBL:AK140509 EMBL:BC031847
IPI:IPI00321884 RefSeq:NP_080447.1 UniGene:Mm.263464 PDB:2RRE
PDBsum:2RRE ProteinModelPortal:Q9DBY8 SMR:Q9DBY8 STRING:Q9DBY8
PhosphoSite:Q9DBY8 PaxDb:Q9DBY8 PRIDE:Q9DBY8
Ensembl:ENSMUST00000027797 GeneID:67459 KEGG:mmu:67459
UCSC:uc007dxb.1 GeneTree:ENSGT00570000079239 InParanoid:Q9DBY8
EvolutionaryTrace:Q9DBY8 NextBio:324638 Bgee:Q9DBY8 CleanEx:MM_NVL
Genevestigator:Q9DBY8 GermOnline:ENSMUSG00000026516 Uniprot:Q9DBY8
Length = 855
Score = 247 (92.0 bits), Expect = 1.2e-18, P = 1.2e-18
Identities = 63/182 (34%), Positives = 94/182 (51%)
Query: 2 LLCTSFDTELVTAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENSPXXXXXXXXXXXXTK 61
LL + E FI V G E + Y+GE R VR VF+ AK ++P +
Sbjct: 629 LLAKAVANESGLNFISVKGPELLNMYVGESERAVRQVFQRAKNSAPCVIFFDEVDALCPR 688
Query: 62 RFDAQTGADREVQRILLELLNQMDGFDQTTNVKVIMATNRADTLDPALLRPGRLDRKIEF 121
R D +TGA R++ +LL +MDG + V ++ ATNR D +DPA+LRPGRLD+ +
Sbjct: 689 RSDRETGAS---VRVVNQLLTEMDGLETRQQVFILAATNRPDIIDPAILRPGRLDKTLFV 745
Query: 122 PLPDRRQKRLVFSTIT---AKMNLSDEVDLEDYV--ARPDRISGADINAICQEVIMATNR 176
LP + + TIT K L ++V+LE R + +GAD+ A+ +E + R
Sbjct: 746 GLPPPADRVAILKTITKNGTKPPLDEDVNLETIANDLRCNCYTGADLTALVREASLCALR 805
Query: 177 AD 178
+
Sbjct: 806 QE 807
Score = 208 (78.3 bits), Expect = 1.4e-24, Sum P(2) = 1.4e-24
Identities = 54/176 (30%), Positives = 81/176 (46%)
Query: 2 LLCTSFDTELVTAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENSPXXXXXXXXXXXXTK 61
LL + EL ++V E V GE + +R++F A N+P K
Sbjct: 312 LLAHAIAGELDLPILKVAAPEIVSGVSGESEQKLRELFDQAVSNAPCIVFIDEIDAITPK 371
Query: 62 RFDAQTGADREVQRILLELLNQMDGFDQTTNVKVIMATNRADTLDPALLRPGRLDRKIEF 121
R A +R + LL ++ ++ T V VI ATNR D+LDPAL R GR DR++
Sbjct: 372 REVASKDMERRIVAQLLTCMDDLNNVAATARVLVIGATNRPDSLDPALRRAGRFDREVCL 431
Query: 122 PLPDRRQKRLVFSTITAKMNLSDEVDLEDYVARPDRISGADINAICQEVIM-ATNR 176
+PD + + T+ K+ L + + GAD+ A+C+E M A NR
Sbjct: 432 GIPDEAARERILQTLCRKLRLPETFNFCHLAHLTPGFVGADLMALCREAAMCAVNR 487
Score = 165 (63.1 bits), Expect = 1.4e-08, Sum P(2) = 1.4e-08
Identities = 55/193 (28%), Positives = 95/193 (49%)
Query: 142 LSDEVDLEDY-VARPDRISGADINAICQEVIMATNRADTLDPALLRPGRLDR---KIEFP 197
++ E+DL VA P+ +SG + Q++ ++A + P ++ +D K E
Sbjct: 317 IAGELDLPILKVAAPEIVSGVSGESE-QKLRELFDQAVSNAPCIVFIDEIDAITPKREVA 375
Query: 198 LPDRRQKRLVFSTITAK--MNFMLNIGNLQVIMATNRADTLDPALLRPGRLDRKIEFPLP 255
D ++R+V +T +N + + VI ATNR D+LDPAL R GR DR++ +P
Sbjct: 376 SKDM-ERRIVAQLLTCMDDLNNVAATARVLVIGATNRPDSLDPALRRAGRFDREVCLGIP 434
Query: 256 DRRQKRLVFSTITAKMNLSDEVDLEDYVARPDRISGADINAICQEAGMHAVRENRYIVLP 315
D + + T+ K+ L + + GAD+ A+C+EA M AV NR ++
Sbjct: 435 DEAARERILQTLCRKLRLPETFNFCHLAHLTPGFVGADLMALCREAAMCAV--NRVLMKQ 492
Query: 316 KDFEKGYKKCAGM 328
+ +K + G+
Sbjct: 493 QAQQKKKPEIEGL 505
Score = 145 (56.1 bits), Expect = 1.4e-24, Sum P(2) = 1.4e-24
Identities = 34/88 (38%), Positives = 53/88 (60%)
Query: 226 VIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLVFSTIT---AKMNLSDEVDLEDY 282
++ ATNR D +DPA+LRPGRLD+ + LP + + TIT K L ++V+LE
Sbjct: 719 ILAATNRPDIIDPAILRPGRLDKTLFVGLPPPADRVAILKTITKNGTKPPLDEDVNLETI 778
Query: 283 V--ARPDRISGADINAICQEAGMHAVRE 308
R + +GAD+ A+ +EA + A+R+
Sbjct: 779 ANDLRCNCYTGADLTALVREASLCALRQ 806
Score = 105 (42.0 bits), Expect = 2.2e-20, Sum P(2) = 2.2e-20
Identities = 20/43 (46%), Positives = 28/43 (65%)
Query: 170 VIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLVFSTIT 212
++ ATNR D +DPA+LRPGRLD+ + LP + + TIT
Sbjct: 719 ILAATNRPDIIDPAILRPGRLDKTLFVGLPPPADRVAILKTIT 761
Score = 40 (19.1 bits), Expect = 1.4e-08, Sum P(2) = 1.4e-08
Identities = 12/33 (36%), Positives = 20/33 (60%)
Query: 126 RRQKRLVFSTITAKMNLSDEVDLED-YVARPDR 157
R Q VFS I+++ L + +LED ++A+ R
Sbjct: 56 RIQVEKVFSIISSEKELKNLKELEDGHLAKRAR 88
>UNIPROTKB|F1N9N5 [details] [associations]
symbol:AFG3L2 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0004222 "metalloendopeptidase activity"
evidence=IEA] [GO:0006508 "proteolysis" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=IEA] [GO:0016021 "integral to membrane"
evidence=IEA] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0030163 "protein catabolic process" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] HAMAP:MF_01458
InterPro:IPR000642 InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005936 InterPro:IPR011546
Pfam:PF00004 Pfam:PF01434 Pfam:PF06480 PROSITE:PS00674
SMART:SM00382 GO:GO:0016021 GO:GO:0005524 GO:GO:0008270
GO:GO:0006508 GO:GO:0004222 GO:GO:0030163
GeneTree:ENSGT00530000063070 GO:GO:0017111 TIGRFAMs:TIGR01241
OMA:LYRFVTT EMBL:AADN02058877 EMBL:AADN02058878 EMBL:AADN02058879
IPI:IPI00683486 Ensembl:ENSGALT00000016639 ArrayExpress:F1N9N5
Uniprot:F1N9N5
Length = 635
Score = 286 (105.7 bits), Expect = 2.7e-24, P = 2.7e-24
Identities = 76/215 (35%), Positives = 113/215 (52%)
Query: 2 LLCTSFDTELVTAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENSPXXXXXXXXXXXXTK 61
LL + E FI V GSEF++ ++G GP VRD+F LA++N+P K
Sbjct: 200 LLAKATAGEANVPFITVNGSEFLEMFVGVGPARVRDLFALARKNAPCILFIDEIDAVGRK 259
Query: 62 RFDAQTGADREVQRILLELLNQMDGFDQTTNVKVIMATNRADTLDPALLRPGRLDRKIEF 121
R G E + L +LL +MDGF+ TTNV ++ TNR D LDPAL+RPGR DR+I
Sbjct: 260 RGRGNFGGQSEQENTLNQLLVEMDGFNTTTNVVILAGTNRPDILDPALMRPGRFDRQIYI 319
Query: 122 PLPDRRQKRLVFSTITAKMNLSDEVDLEDYVARP-----DRISGADINAICQE--VIMAT 174
PD + + +F + L +D +D +AR SGADI +C E +I A
Sbjct: 320 GPPDIKGRASIFKVHLRPLKLDTVLD-KDNLARKLASLTPGFSGADIANVCNEAALIAAR 378
Query: 175 NRADTL-----DPALLRP-GRLDRKIEFPLPDRRQ 203
+ +D + + A+ R G L++K + P+ ++
Sbjct: 379 HLSDAINQKHFEQAIERVIGGLEKKTQVLQPEEKK 413
Score = 158 (60.7 bits), Expect = 2.3e-08, P = 2.3e-08
Identities = 40/125 (32%), Positives = 64/125 (51%)
Query: 223 NLQVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLVFSTITAKMNLSDEVDLEDY 282
N+ ++ TNR D LDPAL+RPGR DR+I PD + + +F + L +D +D
Sbjct: 290 NVVILAGTNRPDILDPALMRPGRFDRQIYIGPPDIKGRASIFKVHLRPLKLDTVLD-KDN 348
Query: 283 VARP-----DRISGADINAICQEAGMHAVRENRYIVLPKDFEKGYKKCAGMHAVRENRYI 337
+AR SGADI +C EA + A R + K FE+ ++ G + + +
Sbjct: 349 LARKLASLTPGFSGADIANVCNEAALIAARHLSDAINQKHFEQAIERVIG--GLEKKTQV 406
Query: 338 VLPKD 342
+ P++
Sbjct: 407 LQPEE 411
>ZFIN|ZDB-GENE-060929-204 [details] [associations]
symbol:spata5l1 "spermatogenesis associated 5-like
1" species:7955 "Danio rerio" [GO:0005524 "ATP binding"
evidence=IEA] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0005575 "cellular_component" evidence=ND] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 ZFIN:ZDB-GENE-060929-204 GO:GO:0005524
GeneTree:ENSGT00700000104502 GO:GO:0017111 CTD:79029 EMBL:CU929075
EMBL:CU595864 IPI:IPI00804177 RefSeq:NP_001070056.2
UniGene:Dr.80583 Ensembl:ENSDART00000101660
Ensembl:ENSDART00000129459 GeneID:767648 KEGG:dre:767648
NextBio:20918042 Uniprot:F1Q8W3
Length = 748
Score = 177 (67.4 bits), Expect = 3.7e-24, Sum P(2) = 3.7e-24
Identities = 37/84 (44%), Positives = 53/84 (63%)
Query: 226 VIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLVFSTITAKMNLSDEVDLEDYVAR 285
++ ATNR + LD ALLRPGRLD+ I P PD + + V T + L +V LED A+
Sbjct: 628 IVAATNRPEALDSALLRPGRLDQIIYVPPPDLQARLAVLRICTKSVPLHQDVCLEDLAAQ 687
Query: 286 PDRISGADINAICQEAGMHAVREN 309
+ SGAD+ +C+EA + A+RE+
Sbjct: 688 TELFSGADLENLCKEAALLALRED 711
Score = 176 (67.0 bits), Expect = 2.8e-10, P = 2.8e-10
Identities = 46/121 (38%), Positives = 66/121 (54%)
Query: 68 GADREVQRILLELLNQMDGFDQTTN--VKVIMATNRADTLDPALLRPGRLDRKIEFPLPD 125
G D+E R L+QM+ + N V ++ ATNR + LD ALLRPGRLD+ I P PD
Sbjct: 605 GGDQEDVR-----LHQME-LQEVCNKDVLIVAATNRPEALDSALLRPGRLDQIIYVPPPD 658
Query: 126 RRQKRLVFSTITAKMNLSDEVDLEDYVARPDRISGADINAICQEVIMATNRADTLDPALL 185
+ + V T + L +V LED A+ + SGAD+ +C+E + R D L + +
Sbjct: 659 LQARLAVLRICTKSVPLHQDVCLEDLAAQTELFSGADLENLCKEAALLALREDGLAVSCV 718
Query: 186 R 186
R
Sbjct: 719 R 719
Score = 175 (66.7 bits), Expect = 3.7e-24, Sum P(2) = 3.7e-24
Identities = 49/178 (27%), Positives = 79/178 (44%)
Query: 2 LLCTSFDTELVTAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKE---NSPXXXXXXXXXXX 58
LL ++ + V G E GE +R VF A++ + P
Sbjct: 236 LLVRCVAKDIGATLVTVNGPEVTGSRPGESEENLRRVFEQARDAADDGPCVLLIDEIDSL 295
Query: 59 XTKRFDAQTGADREVQRILLELLNQMDGFDQTTNVKVIMATNRADTLDPALLRPGRLDRK 118
+R + + + R++ +LL MD +I ATN+ D+LDPAL RPGR DR+
Sbjct: 296 CPRRTGSSSAPEN---RLVAQLLTLMDAIGSHEGFVIIGATNQPDSLDPALRRPGRFDRE 352
Query: 119 IEFPLPDRRQKRLVFSTITAKMNLSDEVDLEDYVARPDRISGADINAICQEVIMATNR 176
+ +P Q+R + + +M LS +VDL GAD++A+ +E + R
Sbjct: 353 VIIGVPSLLQRRSILKCVCREMPLSPDVDLNTLAEMTCGYVGADLSALSREAALQAMR 410
Score = 165 (63.1 bits), Expect = 4.8e-09, P = 4.8e-09
Identities = 38/108 (35%), Positives = 62/108 (57%)
Query: 203 QKRLVFSTITAKMNFMLNIGNLQVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRL 262
+ RLV +T M+ + + +I ATN+ D+LDPAL RPGR DR++ +P Q+R
Sbjct: 307 ENRLVAQLLTL-MDAIGSHEGFVIIGATNQPDSLDPALRRPGRFDREVIIGVPSLLQRRS 365
Query: 263 VFSTITAKMNLSDEVDLEDYVARPDRISGADINAICQEAGMHAVRENR 310
+ + +M LS +VDL GAD++A+ +EA + A+R ++
Sbjct: 366 ILKCVCREMPLSPDVDLNTLAEMTCGYVGADLSALSREAALQAMRHSQ 413
Score = 108 (43.1 bits), Expect = 6.1e-17, Sum P(2) = 6.1e-17
Identities = 26/61 (42%), Positives = 35/61 (57%)
Query: 157 RISGADINAICQE---VIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLVFSTITA 213
R+ ++ +C + ++ ATNR + LD ALLRPGRLD+ I P PD Q RL I
Sbjct: 612 RLHQMELQEVCNKDVLIVAATNRPEALDSALLRPGRLDQIIYVPPPDL-QARLAVLRICT 670
Query: 214 K 214
K
Sbjct: 671 K 671
Score = 105 (42.0 bits), Expect = 7.4e-17, Sum P(2) = 7.4e-17
Identities = 20/46 (43%), Positives = 30/46 (65%)
Query: 170 VIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLVFSTITAKM 215
+I ATN+ D+LDPAL RPGR DR++ +P Q+R + + +M
Sbjct: 329 IIGATNQPDSLDPALRRPGRFDREVIIGVPSLLQRRSILKCVCREM 374
Score = 65 (27.9 bits), Expect = 1.1e-12, Sum P(2) = 1.1e-12
Identities = 15/73 (20%), Positives = 31/73 (42%)
Query: 14 AFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENSPXXXXXXXXXXXXTKRFDAQTGADREV 73
+F + G+E Y+G+ + + +F A+ +P R D + +
Sbjct: 513 SFFSLSGAELFSPYVGDSEKTLAQLFAQARACAPSIVFLDEVDSMVGSREDGSSSSHSVQ 572
Query: 74 QRILLELLNQMDG 86
++L LL ++DG
Sbjct: 573 SQVLSVLLTELDG 585
>UNIPROTKB|I3LLQ8 [details] [associations]
symbol:AFG3L2 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0060013 "righting reflex" evidence=IEA] [GO:0042552
"myelination" evidence=IEA] [GO:0042407 "cristae formation"
evidence=IEA] [GO:0040014 "regulation of multicellular organism
growth" evidence=IEA] [GO:0034982 "mitochondrial protein
processing" evidence=IEA] [GO:0021675 "nerve development"
evidence=IEA] [GO:0016265 "death" evidence=IEA] [GO:0008053
"mitochondrial fusion" evidence=IEA] [GO:0007528 "neuromuscular
junction development" evidence=IEA] [GO:0007409 "axonogenesis"
evidence=IEA] [GO:0005743 "mitochondrial inner membrane"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0006508
"proteolysis" evidence=IEA] [GO:0004222 "metalloendopeptidase
activity" evidence=IEA] HAMAP:MF_01458 InterPro:IPR000642
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005936 Pfam:PF00004 Pfam:PF01434 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005743 GO:GO:0007528
GO:GO:0006508 GO:GO:0040014 GO:GO:0004222 GO:GO:0042552
GO:GO:0007409 GO:GO:0030163 GeneTree:ENSGT00530000063070
GO:GO:0017111 GO:GO:0042407 GO:GO:0008053 GO:GO:0034982
TIGRFAMs:TIGR01241 OMA:LYRFVTT GO:GO:0016265 GO:GO:0021675
GO:GO:0060013 EMBL:FP565334 Ensembl:ENSSSCT00000025900
Uniprot:I3LLQ8
Length = 597
Score = 284 (105.0 bits), Expect = 3.8e-24, P = 3.8e-24
Identities = 73/214 (34%), Positives = 112/214 (52%)
Query: 2 LLCTSFDTELVTAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENSPXXXXXXXXXXXXTK 61
LL + E FI V GSEF++ ++G GP VRD+F LA++N+P K
Sbjct: 148 LLAKATAGEANVPFITVSGSEFLEMFVGVGPARVRDLFALARKNAPCILFIDEIDAVGRK 207
Query: 62 RFDAQTGADREVQRILLELLNQMDGFDQTTNVKVIMATNRADTLDPALLRPGRLDRKIEF 121
R G E + L +LL +MDGF+ TTNV ++ TNR D LDPALLRPGR DR+I
Sbjct: 208 RGRGNFGGQSEQENTLNQLLVEMDGFNTTTNVVILAGTNRPDILDPALLRPGRFDRQIFI 267
Query: 122 PLPDRRQKRLVFSTITAKMNLSDEVDLEDYVARPDRI----SGADINAICQE--VIMATN 175
PD + + +F + L ++ E + + SGAD+ +C E +I A +
Sbjct: 268 GPPDIKGRASIFKVHLRPLKLDSTLEKEKLARKLASLTPGFSGADVANVCNEAALIAARH 327
Query: 176 RADTL-----DPALLRP-GRLDRKIEFPLPDRRQ 203
+D++ + A+ R G L++K + P+ ++
Sbjct: 328 LSDSINQKHFEQAIERVIGGLEKKTQVLQPEEKK 361
Score = 153 (58.9 bits), Expect = 7.5e-08, P = 7.5e-08
Identities = 37/124 (29%), Positives = 62/124 (50%)
Query: 223 NLQVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLVFSTITAKMNLSDEVDLEDY 282
N+ ++ TNR D LDPALLRPGR DR+I PD + + +F + L ++ E
Sbjct: 238 NVVILAGTNRPDILDPALLRPGRFDRQIFIGPPDIKGRASIFKVHLRPLKLDSTLEKEKL 297
Query: 283 VARPDRI----SGADINAICQEAGMHAVRENRYIVLPKDFEKGYKKCAGMHAVRENRYIV 338
+ + SGAD+ +C EA + A R + K FE+ ++ G + + ++
Sbjct: 298 ARKLASLTPGFSGADVANVCNEAALIAARHLSDSINQKHFEQAIERVIG--GLEKKTQVL 355
Query: 339 LPKD 342
P++
Sbjct: 356 QPEE 359
>UNIPROTKB|Q9Y4W6 [details] [associations]
symbol:AFG3L2 "AFG3-like protein 2" species:9606 "Homo
sapiens" [GO:0004222 "metalloendopeptidase activity" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0006508 "proteolysis" evidence=IEA] [GO:0008219
"cell death" evidence=IEA] [GO:0016021 "integral to membrane"
evidence=IEA] [GO:0005743 "mitochondrial inner membrane"
evidence=IEA] [GO:0007409 "axonogenesis" evidence=IEA] [GO:0007528
"neuromuscular junction development" evidence=IEA] [GO:0008053
"mitochondrial fusion" evidence=IEA] [GO:0021675 "nerve
development" evidence=IEA] [GO:0034982 "mitochondrial protein
processing" evidence=IEA] [GO:0040014 "regulation of multicellular
organism growth" evidence=IEA] [GO:0042407 "cristae formation"
evidence=IEA] [GO:0042552 "myelination" evidence=IEA] [GO:0060013
"righting reflex" evidence=IEA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0051082 "unfolded protein binding" evidence=TAS]
[GO:0005739 "mitochondrion" evidence=IDA] InterPro:IPR000642
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005936 InterPro:IPR011546 Pfam:PF00004 Pfam:PF01434
Pfam:PF06480 PROSITE:PS00674 SMART:SM00382 GO:GO:0016021
GO:GO:0005739 GO:GO:0005524 GO:GO:0005743 GO:GO:0046872
GO:GO:0008219 DrugBank:DB00171 GO:GO:0007528 GO:GO:0051082
GO:GO:0008270 GO:GO:0006508 GO:GO:0040014 GO:GO:0004222
GO:GO:0042552 GO:GO:0007409 GO:GO:0030163 eggNOG:COG0465
HOVERGEN:HBG050184 KO:K08956 OrthoDB:EOG4SBDXC GO:GO:0017111
GO:GO:0042407 GO:GO:0008053 GO:GO:0034982 TIGRFAMs:TIGR01241
CTD:10939 GO:GO:0021675 GO:GO:0060013 EMBL:Y18314 EMBL:BC065016
IPI:IPI00001091 RefSeq:NP_006787.2 UniGene:Hs.726355 PDB:2LNA
PDBsum:2LNA ProteinModelPortal:Q9Y4W6 SMR:Q9Y4W6 IntAct:Q9Y4W6
MINT:MINT-1161944 STRING:Q9Y4W6 MEROPS:M41.007 PhosphoSite:Q9Y4W6
DMDM:126302516 PaxDb:Q9Y4W6 PeptideAtlas:Q9Y4W6 PRIDE:Q9Y4W6
Ensembl:ENST00000269143 GeneID:10939 KEGG:hsa:10939 UCSC:uc002kqz.2
GeneCards:GC18M012328 H-InvDB:HIX0027367 HGNC:HGNC:315
HPA:HPA004479 HPA:HPA004480 MIM:604581 MIM:610246 MIM:614487
neXtProt:NX_Q9Y4W6 Orphanet:101109 PharmGKB:PA24612
InParanoid:Q9Y4W6 PhylomeDB:Q9Y4W6 GenomeRNAi:10939 NextBio:41551
ArrayExpress:Q9Y4W6 Bgee:Q9Y4W6 CleanEx:HS_AFG3L2
Genevestigator:Q9Y4W6 GermOnline:ENSG00000141385 Uniprot:Q9Y4W6
Length = 797
Score = 286 (105.7 bits), Expect = 4.5e-24, P = 4.5e-24
Identities = 75/215 (34%), Positives = 114/215 (53%)
Query: 2 LLCTSFDTELVTAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENSPXXXXXXXXXXXXTK 61
LL + E FI V GSEF++ ++G GP VRD+F LA++N+P K
Sbjct: 356 LLAKATAGEANVPFITVSGSEFLEMFVGVGPARVRDLFALARKNAPCILFIDEIDAVGRK 415
Query: 62 RFDAQTGADREVQRILLELLNQMDGFDQTTNVKVIMATNRADTLDPALLRPGRLDRKIEF 121
R G E + L +LL +MDGF+ TTNV ++ TNR D LDPALLRPGR DR+I
Sbjct: 416 RGRGNFGGQSEQENTLNQLLVEMDGFNTTTNVVILAGTNRPDILDPALLRPGRFDRQIFI 475
Query: 122 PLPDRRQKRLVFSTITAKMNLSDEVDLEDYVARP-----DRISGADINAICQE--VIMAT 174
PD + + +F + L ++ +D +AR SGAD+ +C E +I A
Sbjct: 476 GPPDIKGRASIFKVHLRPLKLDSTLE-KDKLARKLASLTPGFSGADVANVCNEAALIAAR 534
Query: 175 NRADTL-----DPALLRP-GRLDRKIEFPLPDRRQ 203
+ +D++ + A+ R G L++K + P+ ++
Sbjct: 535 HLSDSINQKHFEQAIERVIGGLEKKTQVLQPEEKK 569
Score = 155 (59.6 bits), Expect = 6.8e-08, P = 6.8e-08
Identities = 39/125 (31%), Positives = 64/125 (51%)
Query: 223 NLQVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLVFSTITAKMNLSDEVDLEDY 282
N+ ++ TNR D LDPALLRPGR DR+I PD + + +F + L ++ +D
Sbjct: 446 NVVILAGTNRPDILDPALLRPGRFDRQIFIGPPDIKGRASIFKVHLRPLKLDSTLE-KDK 504
Query: 283 VARP-----DRISGADINAICQEAGMHAVRENRYIVLPKDFEKGYKKCAGMHAVRENRYI 337
+AR SGAD+ +C EA + A R + K FE+ ++ G + + +
Sbjct: 505 LARKLASLTPGFSGADVANVCNEAALIAARHLSDSINQKHFEQAIERVIG--GLEKKTQV 562
Query: 338 VLPKD 342
+ P++
Sbjct: 563 LQPEE 567
>UNIPROTKB|E1BZ74 [details] [associations]
symbol:AFG3L2 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0004222 "metalloendopeptidase activity"
evidence=IEA] [GO:0006508 "proteolysis" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=IEA] [GO:0016021 "integral to membrane"
evidence=IEA] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0030163 "protein catabolic process" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005743 "mitochondrial
inner membrane" evidence=IEA] [GO:0007409 "axonogenesis"
evidence=IEA] [GO:0007528 "neuromuscular junction development"
evidence=IEA] [GO:0008053 "mitochondrial fusion" evidence=IEA]
[GO:0016265 "death" evidence=IEA] [GO:0021675 "nerve development"
evidence=IEA] [GO:0034982 "mitochondrial protein processing"
evidence=IEA] [GO:0040014 "regulation of multicellular organism
growth" evidence=IEA] [GO:0042407 "cristae formation" evidence=IEA]
[GO:0042552 "myelination" evidence=IEA] [GO:0060013 "righting
reflex" evidence=IEA] HAMAP:MF_01458 InterPro:IPR000642
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005936 InterPro:IPR011546 Pfam:PF00004 Pfam:PF01434
Pfam:PF06480 PROSITE:PS00674 SMART:SM00382 GO:GO:0016021
GO:GO:0005524 GO:GO:0005743 GO:GO:0008270 GO:GO:0006508
GO:GO:0040014 GO:GO:0004222 GO:GO:0030163
GeneTree:ENSGT00530000063070 GO:GO:0017111 GO:GO:0042407
GO:GO:0008053 GO:GO:0034982 TIGRFAMs:TIGR01241 GO:GO:0016265
GO:GO:0060013 EMBL:AADN02058877 EMBL:AADN02058878 EMBL:AADN02058879
IPI:IPI00603273 Ensembl:ENSGALT00000022474 ArrayExpress:E1BZ74
Uniprot:E1BZ74
Length = 805
Score = 286 (105.7 bits), Expect = 4.6e-24, P = 4.6e-24
Identities = 76/215 (35%), Positives = 113/215 (52%)
Query: 2 LLCTSFDTELVTAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENSPXXXXXXXXXXXXTK 61
LL + E FI V GSEF++ ++G GP VRD+F LA++N+P K
Sbjct: 356 LLAKATAGEANVPFITVNGSEFLEMFVGVGPARVRDLFALARKNAPCILFIDEIDAVGRK 415
Query: 62 RFDAQTGADREVQRILLELLNQMDGFDQTTNVKVIMATNRADTLDPALLRPGRLDRKIEF 121
R G E + L +LL +MDGF+ TTNV ++ TNR D LDPAL+RPGR DR+I
Sbjct: 416 RGRGNFGGQSEQENTLNQLLVEMDGFNTTTNVVILAGTNRPDILDPALMRPGRFDRQIYI 475
Query: 122 PLPDRRQKRLVFSTITAKMNLSDEVDLEDYVARP-----DRISGADINAICQE--VIMAT 174
PD + + +F + L +D +D +AR SGADI +C E +I A
Sbjct: 476 GPPDIKGRASIFKVHLRPLKLDTVLD-KDNLARKLASLTPGFSGADIANVCNEAALIAAR 534
Query: 175 NRADTL-----DPALLRP-GRLDRKIEFPLPDRRQ 203
+ +D + + A+ R G L++K + P+ ++
Sbjct: 535 HLSDAINQKHFEQAIERVIGGLEKKTQVLQPEEKK 569
Score = 158 (60.7 bits), Expect = 3.2e-08, P = 3.2e-08
Identities = 40/125 (32%), Positives = 64/125 (51%)
Query: 223 NLQVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLVFSTITAKMNLSDEVDLEDY 282
N+ ++ TNR D LDPAL+RPGR DR+I PD + + +F + L +D +D
Sbjct: 446 NVVILAGTNRPDILDPALMRPGRFDRQIYIGPPDIKGRASIFKVHLRPLKLDTVLD-KDN 504
Query: 283 VARP-----DRISGADINAICQEAGMHAVRENRYIVLPKDFEKGYKKCAGMHAVRENRYI 337
+AR SGADI +C EA + A R + K FE+ ++ G + + +
Sbjct: 505 LARKLASLTPGFSGADIANVCNEAALIAARHLSDAINQKHFEQAIERVIG--GLEKKTQV 562
Query: 338 VLPKD 342
+ P++
Sbjct: 563 LQPEE 567
>ZFIN|ZDB-GENE-070912-46 [details] [associations]
symbol:afg3l2 "AFG3 ATPase family gene 3-like 2 (S.
cerevisiae)" species:7955 "Danio rerio" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0004222 "metalloendopeptidase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0016020
"membrane" evidence=IEA] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0006508 "proteolysis" evidence=IEA] [GO:0016021
"integral to membrane" evidence=IEA] HAMAP:MF_01458
InterPro:IPR000642 InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005936 InterPro:IPR011546
Pfam:PF00004 Pfam:PF01434 Pfam:PF06480 PROSITE:PS00674
SMART:SM00382 ZFIN:ZDB-GENE-070912-46 GO:GO:0016021 GO:GO:0005524
GO:GO:0008270 GO:GO:0006508 GO:GO:0004222 GO:GO:0030163
eggNOG:COG0465 GeneTree:ENSGT00530000063070 HOGENOM:HOG000217277
HOVERGEN:HBG050184 KO:K08956 GO:GO:0017111 TIGRFAMs:TIGR01241
CTD:10939 MEROPS:M41.007 EMBL:BX000484 EMBL:BC155655
IPI:IPI00513225 RefSeq:NP_001104667.1 UniGene:Dr.82691 SMR:A9JRG9
STRING:A9JRG9 Ensembl:ENSDART00000089834 GeneID:569168
KEGG:dre:569168 NextBio:20889547 Uniprot:A9JRG9
Length = 800
Score = 285 (105.4 bits), Expect = 5.8e-24, P = 5.8e-24
Identities = 76/214 (35%), Positives = 110/214 (51%)
Query: 2 LLCTSFDTELVTAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENSPXXXXXXXXXXXXTK 61
LL + E FI V GSEF++ ++G GP VRD+F LA++N+P K
Sbjct: 351 LLAKATAGEANVPFITVNGSEFLEMFVGVGPARVRDLFVLARKNAPCILFIDEIDAVGRK 410
Query: 62 RFDAQTGADREVQRILLELLNQMDGFDQTTNVKVIMATNRADTLDPALLRPGRLDRKIEF 121
R G E + L +LL +MDGF+ TNV V+ TNR D LDPAL+RPGR DR+I
Sbjct: 411 RGRGNFGGQSEQENTLNQLLVEMDGFNTATNVVVLAGTNRPDILDPALMRPGRFDRQIYI 470
Query: 122 PLPDRRQKRLVFSTITAKMNLSDEVDLE----DYVARPDRISGADINAICQE--VIMATN 175
PD + + +F + L E+D E A SGADI +C E +I A +
Sbjct: 471 GPPDIKGRASIFKVHLRPLKLEAELDKEALARKMAALTPGFSGADIANVCNEAALIAARH 530
Query: 176 RADTL-----DPALLRP-GRLDRKIEFPLPDRRQ 203
+D + + A+ R G L++K + P+ ++
Sbjct: 531 LSDAINQKHFEQAIERVIGGLEKKTQVLQPEEKK 564
Score = 164 (62.8 bits), Expect = 6.8e-09, P = 6.8e-09
Identities = 41/124 (33%), Positives = 62/124 (50%)
Query: 223 NLQVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLVFSTITAKMNLSDEVDLE-- 280
N+ V+ TNR D LDPAL+RPGR DR+I PD + + +F + L E+D E
Sbjct: 441 NVVVLAGTNRPDILDPALMRPGRFDRQIYIGPPDIKGRASIFKVHLRPLKLEAELDKEAL 500
Query: 281 --DYVARPDRISGADINAICQEAGMHAVRENRYIVLPKDFEKGYKKCAGMHAVRENRYIV 338
A SGADI +C EA + A R + K FE+ ++ G + + ++
Sbjct: 501 ARKMAALTPGFSGADIANVCNEAALIAARHLSDAINQKHFEQAIERVIG--GLEKKTQVL 558
Query: 339 LPKD 342
P++
Sbjct: 559 QPEE 562
>MGI|MGI:1916847 [details] [associations]
symbol:Afg3l2 "AFG3(ATPase family gene 3)-like 2 (yeast)"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0004222 "metalloendopeptidase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005739
"mitochondrion" evidence=IDA] [GO:0005743 "mitochondrial inner
membrane" evidence=IDA] [GO:0006508 "proteolysis" evidence=IEA]
[GO:0007005 "mitochondrion organization" evidence=IGI] [GO:0007409
"axonogenesis" evidence=IMP] [GO:0007528 "neuromuscular junction
development" evidence=IMP] [GO:0008053 "mitochondrial fusion"
evidence=IGI] [GO:0008233 "peptidase activity" evidence=IEA]
[GO:0008237 "metallopeptidase activity" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=IEA] [GO:0016020 "membrane"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0016265 "death" evidence=IMP] [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0021675 "nerve development" evidence=IMP]
[GO:0030163 "protein catabolic process" evidence=IEA] [GO:0034982
"mitochondrial protein processing" evidence=IGI] [GO:0040014
"regulation of multicellular organism growth" evidence=IMP]
[GO:0042407 "cristae formation" evidence=IGI] [GO:0042552
"myelination" evidence=IMP] [GO:0046872 "metal ion binding"
evidence=IEA] [GO:0048747 "muscle fiber development" evidence=IMP]
[GO:0060013 "righting reflex" evidence=IMP] InterPro:IPR000642
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005936 InterPro:IPR011546 Pfam:PF00004 Pfam:PF01434
Pfam:PF06480 PROSITE:PS00674 SMART:SM00382 MGI:MGI:1916847
GO:GO:0016021 GO:GO:0005524 GO:GO:0005743 GO:GO:0046872
GO:GO:0007528 GO:GO:0008270 GO:GO:0006508 GO:GO:0040014
GO:GO:0004222 GO:GO:0042552 GO:GO:0007409 GO:GO:0030163
eggNOG:COG0465 GeneTree:ENSGT00530000063070 HOGENOM:HOG000217277
HOVERGEN:HBG050184 KO:K08956 OrthoDB:EOG4SBDXC GO:GO:0017111
GO:GO:0042407 GO:GO:0008053 GO:GO:0034982 TIGRFAMs:TIGR01241
CTD:10939 OMA:LYRFVTT GO:GO:0016265 GO:GO:0021675 GO:GO:0060013
MEROPS:M41.007 EMBL:BC036999 EMBL:BC043056 IPI:IPI00170357
RefSeq:NP_081406.1 UniGene:Mm.426052 ProteinModelPortal:Q8JZQ2
SMR:Q8JZQ2 IntAct:Q8JZQ2 STRING:Q8JZQ2 PhosphoSite:Q8JZQ2
PaxDb:Q8JZQ2 PRIDE:Q8JZQ2 Ensembl:ENSMUST00000025408 GeneID:69597
KEGG:mmu:69597 UCSC:uc008fmf.1 InParanoid:Q8JZQ2 NextBio:329880
Bgee:Q8JZQ2 CleanEx:MM_AFG3L2 Genevestigator:Q8JZQ2
GermOnline:ENSMUSG00000024527 Uniprot:Q8JZQ2
Length = 802
Score = 285 (105.4 bits), Expect = 5.8e-24, P = 5.8e-24
Identities = 75/215 (34%), Positives = 113/215 (52%)
Query: 2 LLCTSFDTELVTAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENSPXXXXXXXXXXXXTK 61
LL + E FI V GSEF++ ++G GP VRD+F LA++N+P K
Sbjct: 355 LLAKATAGEANVPFITVSGSEFLEMFVGVGPARVRDLFALARKNAPCILFIDEIDAVGRK 414
Query: 62 RFDAQTGADREVQRILLELLNQMDGFDQTTNVKVIMATNRADTLDPALLRPGRLDRKIEF 121
R G E + L +LL +MDGF+ TTNV ++ TNR D LDPALLRPGR DR+I
Sbjct: 415 RGRGNFGGQSEQENTLNQLLVEMDGFNTTTNVVILAGTNRPDILDPALLRPGRFDRQIFI 474
Query: 122 PLPDRRQKRLVFSTITAKMNLSDEVDLEDYVARP-----DRISGADINAICQE--VIMAT 174
PD + + +F + L ++ +D +AR SGAD+ +C E +I A
Sbjct: 475 GPPDIKGRASIFKVHLRPLKLDSALE-KDKLARKLASLTPGFSGADVANVCNEAALIAAR 533
Query: 175 NRADTL-----DPALLRP-GRLDRKIEFPLPDRRQ 203
+ +D + + A+ R G L++K + P+ ++
Sbjct: 534 HLSDAINEKHFEQAIERVIGGLEKKTQVLQPEEKK 568
Score = 156 (60.0 bits), Expect = 5.3e-08, P = 5.3e-08
Identities = 39/125 (31%), Positives = 64/125 (51%)
Query: 223 NLQVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLVFSTITAKMNLSDEVDLEDY 282
N+ ++ TNR D LDPALLRPGR DR+I PD + + +F + L ++ +D
Sbjct: 445 NVVILAGTNRPDILDPALLRPGRFDRQIFIGPPDIKGRASIFKVHLRPLKLDSALE-KDK 503
Query: 283 VARP-----DRISGADINAICQEAGMHAVRENRYIVLPKDFEKGYKKCAGMHAVRENRYI 337
+AR SGAD+ +C EA + A R + K FE+ ++ G + + +
Sbjct: 504 LARKLASLTPGFSGADVANVCNEAALIAARHLSDAINEKHFEQAIERVIG--GLEKKTQV 561
Query: 338 VLPKD 342
+ P++
Sbjct: 562 LQPEE 566
>UNIPROTKB|F1LN92 [details] [associations]
symbol:Afg3l2 "Protein Afg3l2" species:10116 "Rattus
norvegicus" [GO:0004222 "metalloendopeptidase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005743
"mitochondrial inner membrane" evidence=IEA] [GO:0006508
"proteolysis" evidence=IEA] [GO:0007409 "axonogenesis"
evidence=IEA] [GO:0007528 "neuromuscular junction development"
evidence=IEA] [GO:0008053 "mitochondrial fusion" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0016021 "integral
to membrane" evidence=IEA] [GO:0016265 "death" evidence=IEA]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
[GO:0021675 "nerve development" evidence=IEA] [GO:0030163 "protein
catabolic process" evidence=IEA] [GO:0034982 "mitochondrial protein
processing" evidence=IEA] [GO:0040014 "regulation of multicellular
organism growth" evidence=IEA] [GO:0042407 "cristae formation"
evidence=IEA] [GO:0042552 "myelination" evidence=IEA] [GO:0060013
"righting reflex" evidence=IEA] HAMAP:MF_01458 InterPro:IPR000642
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005936 InterPro:IPR011546 Pfam:PF00004 Pfam:PF01434
Pfam:PF06480 PROSITE:PS00674 SMART:SM00382 RGD:1305259
GO:GO:0016021 GO:GO:0005524 GO:GO:0005743 GO:GO:0007528
GO:GO:0008270 GO:GO:0006508 GO:GO:0040014 GO:GO:0004222
GO:GO:0042552 GO:GO:0007409 GO:GO:0030163
GeneTree:ENSGT00530000063070 KO:K08956 GO:GO:0017111 GO:GO:0042407
GO:GO:0008053 GO:GO:0034982 TIGRFAMs:TIGR01241 CTD:10939
OMA:LYRFVTT GO:GO:0016265 GO:GO:0021675 GO:GO:0060013
IPI:IPI00192903 RefSeq:NP_001128336.1 UniGene:Rn.8386
ProteinModelPortal:F1LN92 PRIDE:F1LN92 Ensembl:ENSRNOT00000024632
GeneID:307350 KEGG:rno:307350 NextBio:657254 ArrayExpress:F1LN92
Uniprot:F1LN92
Length = 802
Score = 285 (105.4 bits), Expect = 5.8e-24, P = 5.8e-24
Identities = 75/215 (34%), Positives = 113/215 (52%)
Query: 2 LLCTSFDTELVTAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENSPXXXXXXXXXXXXTK 61
LL + E FI V GSEF++ ++G GP VRD+F LA++N+P K
Sbjct: 355 LLAKATAGEANVPFITVSGSEFLEMFVGVGPARVRDLFALARKNAPCILFIDEIDAVGRK 414
Query: 62 RFDAQTGADREVQRILLELLNQMDGFDQTTNVKVIMATNRADTLDPALLRPGRLDRKIEF 121
R G E + L +LL +MDGF+ TTNV ++ TNR D LDPALLRPGR DR+I
Sbjct: 415 RGRGNFGGQSEQENTLNQLLVEMDGFNTTTNVVILAGTNRPDILDPALLRPGRFDRQIFI 474
Query: 122 PLPDRRQKRLVFSTITAKMNLSDEVDLEDYVARP-----DRISGADINAICQE--VIMAT 174
PD + + +F + L ++ +D +AR SGAD+ +C E +I A
Sbjct: 475 GPPDIKGRASIFKVHLRPLKLDSALE-KDKLARKLASLTPGFSGADVANVCNEAALIAAR 533
Query: 175 NRADTL-----DPALLRP-GRLDRKIEFPLPDRRQ 203
+ +D + + A+ R G L++K + P+ ++
Sbjct: 534 HLSDAINEKHFEQAIERVIGGLEKKTQVLQPEEKK 568
Score = 156 (60.0 bits), Expect = 5.3e-08, P = 5.3e-08
Identities = 39/125 (31%), Positives = 64/125 (51%)
Query: 223 NLQVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLVFSTITAKMNLSDEVDLEDY 282
N+ ++ TNR D LDPALLRPGR DR+I PD + + +F + L ++ +D
Sbjct: 445 NVVILAGTNRPDILDPALLRPGRFDRQIFIGPPDIKGRASIFKVHLRPLKLDSALE-KDK 503
Query: 283 VARP-----DRISGADINAICQEAGMHAVRENRYIVLPKDFEKGYKKCAGMHAVRENRYI 337
+AR SGAD+ +C EA + A R + K FE+ ++ G + + +
Sbjct: 504 LARKLASLTPGFSGADVANVCNEAALIAARHLSDAINEKHFEQAIERVIG--GLEKKTQV 561
Query: 338 VLPKD 342
+ P++
Sbjct: 562 LQPEE 566
>FB|FBgn0036702 [details] [associations]
symbol:CG6512 species:7227 "Drosophila melanogaster"
[GO:0016887 "ATPase activity" evidence=ISS] [GO:0005783
"endoplasmic reticulum" evidence=ISS] [GO:0005739 "mitochondrion"
evidence=ISS] [GO:0004222 "metalloendopeptidase activity"
evidence=ISS] [GO:0006508 "proteolysis" evidence=ISS] [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0016021 "integral to
membrane" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0046331
"lateral inhibition" evidence=IMP] HAMAP:MF_01458
InterPro:IPR000642 InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005936 InterPro:IPR011546
Pfam:PF00004 Pfam:PF01434 Pfam:PF06480 PROSITE:PS00674
SMART:SM00382 GO:GO:0016021 GO:GO:0005524 EMBL:AE014296
GO:GO:0008270 GO:GO:0006200 GO:GO:0006508 GO:GO:0004222
GO:GO:0016887 GO:GO:0030163 GO:GO:0046331
GeneTree:ENSGT00530000063070 KO:K08956 TIGRFAMs:TIGR01241
OMA:YSEDTAM HSSP:Q9LCZ4 UniGene:Dm.986 GeneID:39922
KEGG:dme:Dmel_CG6512 FlyBase:FBgn0036702 GenomeRNAi:39922
NextBio:816090 EMBL:AY084199 RefSeq:NP_730248.2 SMR:Q8T4G5
IntAct:Q8T4G5 MINT:MINT-1004758 STRING:Q8T4G5
EnsemblMetazoa:FBtr0075251 UCSC:CG6512-RA InParanoid:Q8T4G5
Uniprot:Q8T4G5
Length = 826
Score = 285 (105.4 bits), Expect = 6.1e-24, P = 6.1e-24
Identities = 73/210 (34%), Positives = 109/210 (51%)
Query: 2 LLCTSFDTELVTAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENSPXXXXXXXXXXXXTK 61
LL + E FI V GSEF++ ++G GP VRD+F +A++++P K
Sbjct: 376 LLAKATAGEANVPFITVSGSEFLEMFVGVGPSRVRDMFAMARKHAPCILFIDEIDAVGRK 435
Query: 62 RFDAQTGADREVQRILLELLNQMDGFDQTTNVKVIMATNRADTLDPALLRPGRLDRKIEF 121
R G E + L +LL +MDGF+ TTNV V+ ATNR D LD AL+RPGR DR+I
Sbjct: 436 RGGKTFGGHSEQENTLNQLLVEMDGFNTTTNVVVLAATNRVDILDKALMRPGRFDRQIYV 495
Query: 122 PLPDRRQKRLVFSTITAKMNLS-DEVDLEDYVAR-PDRISGADINAICQEVIMATNRADT 179
P PD + + +F + S D+ +L +A +GADI +C E + R D+
Sbjct: 496 PAPDIKGRASIFKVHLGNLKTSLDKNELSRKMAALTPGFTGADIANVCNEAALIAAR-DS 554
Query: 180 LDPALLRPGRLDRKIEFPLPDRRQKRLVFS 209
D +L+ ++ IE + +K V +
Sbjct: 555 KDSIVLK--HFEQAIERVIAGMEKKTNVLA 582
Score = 173 (66.0 bits), Expect = 7.0e-10, P = 7.0e-10
Identities = 41/109 (37%), Positives = 63/109 (57%)
Query: 223 NLQVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLVFSTITAKMNLS-DEVDLED 281
N+ V+ ATNR D LD AL+RPGR DR+I P PD + + +F + S D+ +L
Sbjct: 466 NVVVLAATNRVDILDKALMRPGRFDRQIYVPAPDIKGRASIFKVHLGNLKTSLDKNELSR 525
Query: 282 YVAR-PDRISGADINAICQEAGMHAVRENRYIVLPKDFEKGYKKC-AGM 328
+A +GADI +C EA + A R+++ ++ K FE+ ++ AGM
Sbjct: 526 KMAALTPGFTGADIANVCNEAALIAARDSKDSIVLKHFEQAIERVIAGM 574
>UNIPROTKB|Q55700 [details] [associations]
symbol:ftsH2 "ATP-dependent zinc metalloprotease FtsH 2"
species:1111708 "Synechocystis sp. PCC 6803 substr. Kazusa"
[GO:0010206 "photosystem II repair" evidence=IMP] [GO:0042651
"thylakoid membrane" evidence=IDA] [GO:0005886 "plasma membrane"
evidence=IDA] [GO:0009523 "photosystem II" evidence=IDA]
HAMAP:MF_01458 InterPro:IPR000642 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005936
InterPro:IPR011546 Pfam:PF00004 Pfam:PF01434 Pfam:PF06480
PROSITE:PS00674 SMART:SM00382 GO:GO:0016021 GO:GO:0005524
GO:GO:0046872 GO:GO:0008270 GO:GO:0006508 GO:GO:0004222
GO:GO:0030163 eggNOG:COG0465 GO:GO:0017111 TIGRFAMs:TIGR01241
EMBL:BA000022 GenomeReviews:BA000022_GR GO:GO:0042651 GO:GO:0010206
HOGENOM:HOG000217276 KO:K03798 PIR:S76378 RefSeq:NP_442160.1
RefSeq:YP_005652219.1 ProteinModelPortal:Q55700 SMR:Q55700
IntAct:Q55700 STRING:Q55700 MEROPS:M41.017 GeneID:12253438
GeneID:952628 KEGG:syn:slr0228 KEGG:syy:SYNGTS_2266 PATRIC:23841938
OMA:NTASTRM Uniprot:Q55700
Length = 627
Score = 281 (104.0 bits), Expect = 9.1e-24, P = 9.1e-24
Identities = 69/211 (32%), Positives = 104/211 (49%)
Query: 2 LLCTSFDTELVTAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENSPXXXXXXXXXXXXTK 61
LL + E F + GSEFV+ ++G G VRD+F+ AKEN+P +
Sbjct: 220 LLAKAIAGEAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCLIFIDEIDAVGRQ 279
Query: 62 RFDAQTGADREVQRILLELLNQMDGFDQTTNVKVIMATNRADTLDPALLRPGRLDRKIEF 121
R G + E ++ L +LL +MDGF+ T + +I ATNR D LD AL+RPGR DR++
Sbjct: 280 RGAGIGGGNDEREQTLNQLLTEMDGFEGNTGIIIIAATNRPDVLDSALMRPGRFDRQVMV 339
Query: 122 PLPDRRQKRLVFSTITAKMNLSDEVDLEDYVARPDRISGADI-NAICQEVIMATNRADTL 180
PD ++ + L+ EV ++ R SGAD+ N + + I+ R +
Sbjct: 340 DAPDYSGRKEILEVHARNKKLAPEVSIDSIARRTPGFSGADLANLLNEAAILTARRRKSA 399
Query: 181 DPALLRPGRLDRKIE----FPLPDRRQKRLV 207
L +DR + PL D + KRL+
Sbjct: 400 ITLLEIDDAVDRVVAGMEGTPLVDSKSKRLI 430
Score = 148 (57.2 bits), Expect = 2.9e-07, P = 2.9e-07
Identities = 39/130 (30%), Positives = 61/130 (46%)
Query: 200 DRRQKRLVFSTITAKMNFMLNIGNLQVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQ 259
D R++ L +T F N G + +I ATNR D LD AL+RPGR DR++ PD
Sbjct: 289 DEREQTLN-QLLTEMDGFEGNTGII-IIAATNRPDVLDSALMRPGRFDRQVMVDAPDYSG 346
Query: 260 KRLVFSTITAKMNLSDEVDLEDYVARPDRISGADINAICQEAGMHAVRENRYIVLPKDFE 319
++ + L+ EV ++ R SGAD+ + EA + R + + + +
Sbjct: 347 RKEILEVHARNKKLAPEVSIDSIARRTPGFSGADLANLLNEAAILTARRRKSAITLLEID 406
Query: 320 KGYKKC-AGM 328
+ AGM
Sbjct: 407 DAVDRVVAGM 416
>TAIR|locus:2052806 [details] [associations]
symbol:VAR2 "VARIEGATED 2" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0004222 "metalloendopeptidase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0008152 "metabolic
process" evidence=IEA] [GO:0008237 "metallopeptidase activity"
evidence=ISS] [GO:0008270 "zinc ion binding" evidence=IEA;ISS]
[GO:0016887 "ATPase activity" evidence=ISS] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0004176
"ATP-dependent peptidase activity" evidence=ISS] [GO:0009535
"chloroplast thylakoid membrane" evidence=IDA] [GO:0010027
"thylakoid membrane organization" evidence=RCA;IMP] [GO:0009507
"chloroplast" evidence=IDA] [GO:0010205 "photoinhibition"
evidence=IMP] [GO:0031977 "thylakoid lumen" evidence=IDA]
[GO:0009941 "chloroplast envelope" evidence=IDA] [GO:0009579
"thylakoid" evidence=IDA] [GO:0010304 "PSII associated
light-harvesting complex II catabolic process" evidence=RCA;TAS]
[GO:0016020 "membrane" evidence=IDA] [GO:0030163 "protein catabolic
process" evidence=IDA] [GO:0072593 "reactive oxygen species
metabolic process" evidence=IDA] [GO:0009534 "chloroplast
thylakoid" evidence=IDA] [GO:0006098 "pentose-phosphate shunt"
evidence=RCA] [GO:0006364 "rRNA processing" evidence=RCA]
[GO:0009902 "chloroplast relocation" evidence=RCA] [GO:0010207
"photosystem II assembly" evidence=RCA] [GO:0034660 "ncRNA
metabolic process" evidence=RCA] [GO:0035304 "regulation of protein
dephosphorylation" evidence=RCA] [GO:0042744 "hydrogen peroxide
catabolic process" evidence=RCA] [GO:0042793 "transcription from
plastid promoter" evidence=RCA] [GO:0045893 "positive regulation of
transcription, DNA-dependent" evidence=RCA] [GO:0010206
"photosystem II repair" evidence=IMP] InterPro:IPR000642
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005936 Pfam:PF00004 Pfam:PF01434 PROSITE:PS00674
SMART:SM00382 GO:GO:0016021 GO:GO:0007275 GO:GO:0005524
EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0046872 GO:GO:0006508
GO:GO:0009941 GO:GO:0008237 GO:GO:0004222 EMBL:AC004669
GO:GO:0010027 GO:GO:0072593 GO:GO:0010205 eggNOG:COG0465
TIGRFAMs:TIGR01241 HSSP:Q9WZ49 GO:GO:0009535 GO:GO:0031977
GO:GO:0004176 GO:GO:0010206 HOGENOM:HOG000217276 KO:K03798
GO:GO:0010304 EMBL:AF135189 EMBL:AY045599 EMBL:AY093791
EMBL:AK221155 IPI:IPI00546467 PIR:F84714 RefSeq:NP_850156.1
UniGene:At.22024 UniGene:At.71129 UniGene:At.75189
ProteinModelPortal:O80860 SMR:O80860 IntAct:O80860 STRING:O80860
MEROPS:M41.005 World-2DPAGE:0003:O80860 PaxDb:O80860 PRIDE:O80860
ProMEX:O80860 EnsemblPlants:AT2G30950.1 GeneID:817646
KEGG:ath:AT2G30950 GeneFarm:2504 TAIR:At2g30950 InParanoid:O80860
OMA:LEIIAMR PhylomeDB:O80860 ProtClustDB:CLSN2679937
Genevestigator:O80860 Uniprot:O80860
Length = 695
Score = 281 (104.0 bits), Expect = 1.2e-23, P = 1.2e-23
Identities = 66/179 (36%), Positives = 94/179 (52%)
Query: 2 LLCTSFDTELVTAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENSPXXXXXXXXXXXXTK 61
LL + E F + GSEFV+ ++G G VRD+F+ AKEN+P +
Sbjct: 275 LLAKAIAGEAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEIDAVGRQ 334
Query: 62 RFDAQTGADREVQRILLELLNQMDGFDQTTNVKVIMATNRADTLDPALLRPGRLDRKIEF 121
R G + E ++ L +LL +MDGF+ T V V+ ATNRAD LD ALLRPGR DR++
Sbjct: 335 RGTGIGGGNDEREQTLNQLLTEMDGFEGNTGVIVVAATNRADILDSALLRPGRFDRQVSV 394
Query: 122 PLPDRRQKRLVFSTITAKMNLSDEVDLEDYVARPDRISGADI-NAICQEVIMATNRADT 179
+PD + + + ++V LE R SGAD+ N + + I+A RA T
Sbjct: 395 DVPDVKGRTDILKVHAGNKKFDNDVSLEIIAMRTPGFSGADLANLLNEAAILAGRRART 453
Score = 162 (62.1 bits), Expect = 9.3e-09, P = 9.3e-09
Identities = 44/130 (33%), Positives = 64/130 (49%)
Query: 200 DRRQKRLVFSTITAKMNFMLNIGNLQVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQ 259
D R++ L +T F N G + V+ ATNRAD LD ALLRPGR DR++ +PD +
Sbjct: 344 DEREQTLN-QLLTEMDGFEGNTGVI-VVAATNRADILDSALLRPGRFDRQVSVDVPDVKG 401
Query: 260 KRLVFSTITAKMNLSDEVDLEDYVARPDRISGADINAICQEAGMHAVRENRYIVLPKDFE 319
+ + ++V LE R SGAD+ + EA + A R R + K+ +
Sbjct: 402 RTDILKVHAGNKKFDNDVSLEIIAMRTPGFSGADLANLLNEAAILAGRRARTSISSKEID 461
Query: 320 KGYKKC-AGM 328
+ AGM
Sbjct: 462 DSIDRIVAGM 471
>UNIPROTKB|Q2KJI7 [details] [associations]
symbol:AFG3L2 "AFG3-like protein 2" species:9913 "Bos
taurus" [GO:0060013 "righting reflex" evidence=IEA] [GO:0042552
"myelination" evidence=IEA] [GO:0042407 "cristae formation"
evidence=IEA] [GO:0040014 "regulation of multicellular organism
growth" evidence=IEA] [GO:0034982 "mitochondrial protein
processing" evidence=IEA] [GO:0021675 "nerve development"
evidence=IEA] [GO:0016265 "death" evidence=IEA] [GO:0008053
"mitochondrial fusion" evidence=IEA] [GO:0007528 "neuromuscular
junction development" evidence=IEA] [GO:0007409 "axonogenesis"
evidence=IEA] [GO:0005743 "mitochondrial inner membrane"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0006508 "proteolysis" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0030163 "protein catabolic process" evidence=IEA]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0004222
"metalloendopeptidase activity" evidence=IEA] InterPro:IPR000642
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005936 InterPro:IPR011546 Pfam:PF00004 Pfam:PF01434
Pfam:PF06480 PROSITE:PS00674 SMART:SM00382 GO:GO:0016021
GO:GO:0005524 GO:GO:0005743 GO:GO:0046872 GO:GO:0007528
GO:GO:0008270 GO:GO:0006508 GO:GO:0040014 GO:GO:0004222
GO:GO:0042552 GO:GO:0007409 GO:GO:0030163 MEROPS:M41.016
eggNOG:COG0465 GeneTree:ENSGT00530000063070 HOGENOM:HOG000217277
HOVERGEN:HBG050184 KO:K08956 OrthoDB:EOG4SBDXC GO:GO:0017111
GO:GO:0042407 GO:GO:0008053 GO:GO:0034982 TIGRFAMs:TIGR01241
EMBL:BC105322 IPI:IPI00686580 RefSeq:NP_001039676.1 UniGene:Bt.1657
HSSP:Q9WZ49 ProteinModelPortal:Q2KJI7 SMR:Q2KJI7 STRING:Q2KJI7
PRIDE:Q2KJI7 Ensembl:ENSBTAT00000031029 GeneID:515757
KEGG:bta:515757 CTD:10939 InParanoid:Q2KJI7 OMA:LYRFVTT
NextBio:20871990 GO:GO:0016265 GO:GO:0021675 GO:GO:0060013
Uniprot:Q2KJI7
Length = 805
Score = 282 (104.3 bits), Expect = 1.2e-23, P = 1.2e-23
Identities = 72/214 (33%), Positives = 112/214 (52%)
Query: 2 LLCTSFDTELVTAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENSPXXXXXXXXXXXXTK 61
LL + E FI V GSEF++ ++G GP VRD+F LA++N+P K
Sbjct: 357 LLAKATAGEANVPFITVSGSEFLEMFVGVGPARVRDLFALARKNAPCILFIDEIDAVGRK 416
Query: 62 RFDAQTGADREVQRILLELLNQMDGFDQTTNVKVIMATNRADTLDPALLRPGRLDRKIEF 121
R G E + L +LL +MDGF+ TTNV ++ TNR D LDPAL+RPGR DR+I
Sbjct: 417 RGRGNFGGQSEQENTLNQLLVEMDGFNTTTNVVILAGTNRPDILDPALMRPGRFDRQIFI 476
Query: 122 PLPDRRQKRLVFSTITAKMNLSDEVDLEDYVARPDRI----SGADINAICQE--VIMATN 175
PD + + +F + L ++ E + + SGAD+ +C E +I A +
Sbjct: 477 GPPDIKGRASIFKVHLRPLKLDSTLEKEKLARKLASLTPGFSGADVANVCNEAALIAARH 536
Query: 176 RADTL-----DPALLRP-GRLDRKIEFPLPDRRQ 203
+D++ + A+ R G L++K + P+ ++
Sbjct: 537 LSDSINQKHFEQAIERVIGGLEKKTQVLQPEEKK 570
Score = 151 (58.2 bits), Expect = 1.9e-07, P = 1.9e-07
Identities = 36/124 (29%), Positives = 62/124 (50%)
Query: 223 NLQVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLVFSTITAKMNLSDEVDLEDY 282
N+ ++ TNR D LDPAL+RPGR DR+I PD + + +F + L ++ E
Sbjct: 447 NVVILAGTNRPDILDPALMRPGRFDRQIFIGPPDIKGRASIFKVHLRPLKLDSTLEKEKL 506
Query: 283 VARPDRI----SGADINAICQEAGMHAVRENRYIVLPKDFEKGYKKCAGMHAVRENRYIV 338
+ + SGAD+ +C EA + A R + K FE+ ++ G + + ++
Sbjct: 507 ARKLASLTPGFSGADVANVCNEAALIAARHLSDSINQKHFEQAIERVIG--GLEKKTQVL 564
Query: 339 LPKD 342
P++
Sbjct: 565 QPEE 568
>UNIPROTKB|E2QYF3 [details] [associations]
symbol:AFG3L2 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0060013 "righting reflex" evidence=IEA]
[GO:0042552 "myelination" evidence=IEA] [GO:0042407 "cristae
formation" evidence=IEA] [GO:0040014 "regulation of multicellular
organism growth" evidence=IEA] [GO:0034982 "mitochondrial protein
processing" evidence=IEA] [GO:0021675 "nerve development"
evidence=IEA] [GO:0016265 "death" evidence=IEA] [GO:0008053
"mitochondrial fusion" evidence=IEA] [GO:0007528 "neuromuscular
junction development" evidence=IEA] [GO:0007409 "axonogenesis"
evidence=IEA] [GO:0005743 "mitochondrial inner membrane"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0016021
"integral to membrane" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0006508 "proteolysis" evidence=IEA] [GO:0004222
"metalloendopeptidase activity" evidence=IEA] HAMAP:MF_01458
InterPro:IPR000642 InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005936 InterPro:IPR011546
Pfam:PF00004 Pfam:PF01434 Pfam:PF06480 PROSITE:PS00674
SMART:SM00382 GO:GO:0016021 GO:GO:0005524 GO:GO:0005743
GO:GO:0007528 GO:GO:0008270 GO:GO:0006508 GO:GO:0040014
GO:GO:0004222 GO:GO:0042552 GO:GO:0007409 GO:GO:0030163
GeneTree:ENSGT00530000063070 KO:K08956 GO:GO:0017111 GO:GO:0042407
GO:GO:0008053 GO:GO:0034982 TIGRFAMs:TIGR01241 CTD:10939
OMA:LYRFVTT GO:GO:0016265 GO:GO:0021675 GO:GO:0060013
EMBL:AAEX03005521 RefSeq:XP_547682.2 ProteinModelPortal:E2QYF3
Ensembl:ENSCAFT00000029872 GeneID:490560 KEGG:cfa:490560
Uniprot:E2QYF3
Length = 806
Score = 282 (104.3 bits), Expect = 1.2e-23, P = 1.2e-23
Identities = 72/214 (33%), Positives = 112/214 (52%)
Query: 2 LLCTSFDTELVTAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENSPXXXXXXXXXXXXTK 61
LL + E FI V GSEF++ ++G GP VRD+F LA++N+P K
Sbjct: 357 LLAKATAGEANVPFITVSGSEFLEMFVGVGPARVRDLFALARKNAPCILFIDEIDAVGRK 416
Query: 62 RFDAQTGADREVQRILLELLNQMDGFDQTTNVKVIMATNRADTLDPALLRPGRLDRKIEF 121
R G E + L +LL +MDGF+ TTNV ++ TNR D LDPAL+RPGR DR+I
Sbjct: 417 RGRGNFGGQSEQENTLNQLLVEMDGFNTTTNVVILAGTNRPDILDPALMRPGRFDRQIFI 476
Query: 122 PLPDRRQKRLVFSTITAKMNLSDEVDLEDYVARPDRI----SGADINAICQE--VIMATN 175
PD + + +F + L ++ E + + SGAD+ +C E +I A +
Sbjct: 477 GPPDIKGRASIFKVHLRPLKLDSALEKEKLARKLASLTPGFSGADVANVCNEAALIAARH 536
Query: 176 RADTL-----DPALLRP-GRLDRKIEFPLPDRRQ 203
+D++ + A+ R G L++K + P+ ++
Sbjct: 537 LSDSINQKHFEQAIERVIGGLEKKTQVLQPEEKK 570
Score = 151 (58.2 bits), Expect = 1.9e-07, P = 1.9e-07
Identities = 36/124 (29%), Positives = 62/124 (50%)
Query: 223 NLQVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLVFSTITAKMNLSDEVDLEDY 282
N+ ++ TNR D LDPAL+RPGR DR+I PD + + +F + L ++ E
Sbjct: 447 NVVILAGTNRPDILDPALMRPGRFDRQIFIGPPDIKGRASIFKVHLRPLKLDSALEKEKL 506
Query: 283 VARPDRI----SGADINAICQEAGMHAVRENRYIVLPKDFEKGYKKCAGMHAVRENRYIV 338
+ + SGAD+ +C EA + A R + K FE+ ++ G + + ++
Sbjct: 507 ARKLASLTPGFSGADVANVCNEAALIAARHLSDSINQKHFEQAIERVIG--GLEKKTQVL 564
Query: 339 LPKD 342
P++
Sbjct: 565 QPEE 568
>DICTYBASE|DDB_G0282241 [details] [associations]
symbol:DDB_G0282241 species:44689 "Dictyostelium
discoideum" [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IEA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 dictyBase:DDB_G0282241 GO:GO:0005524 eggNOG:COG0464
GO:GO:0017111 EMBL:AAFI02000046 RefSeq:XP_640304.1
ProteinModelPortal:Q54ST1 EnsemblProtists:DDB0205288 GeneID:8623480
KEGG:ddi:DDB_G0282241 InParanoid:Q54ST1 OMA:IEMISID Uniprot:Q54ST1
Length = 825
Score = 262 (97.3 bits), Expect = 1.8e-21, P = 1.8e-21
Identities = 57/169 (33%), Positives = 89/169 (52%)
Query: 14 AFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENSPXXXXXXXXXXXXTKR-FDAQTGADRE 72
+F+ + G+ YLG+ + +RD+F+ A++ +P +KR + D
Sbjct: 631 SFLSLSGATIFSPYLGDSEQTIRDIFKKARQTTPSILFFDEIDAIVSKRNLSDNSSGDNA 690
Query: 73 VQRILLELLNQMDGFDQTTNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLV 132
R+L LN+MDG +Q V VI ATNR D +D ALLRPGR D+ +E LPD+ + +
Sbjct: 691 QSRVLSTFLNEMDGVEQLNGVIVIGATNRLDMIDNALLRPGRFDKILEIKLPDQLSRLKI 750
Query: 133 FSTITAKMNLSDEVDLEDYVARPDRISGADINAICQEVIMATNRADTLD 181
T + LSD V+L + + SGAD+ +C+E + R D L+
Sbjct: 751 LKIKTKSIPLSDNVNLIEISNLTNGFSGADLENLCREASFQSLRRDLLN 799
Score = 177 (67.4 bits), Expect = 1.6e-23, Sum P(2) = 1.6e-23
Identities = 41/110 (37%), Positives = 62/110 (56%)
Query: 200 DRRQKRLVFSTITAKMNFMLNIGNLQVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQ 259
D Q R V ST +M+ + + + VI ATNR D +D ALLRPGR D+ +E LPD+
Sbjct: 688 DNAQSR-VLSTFLNEMDGVEQLNGVIVIGATNRLDMIDNALLRPGRFDKILEIKLPDQLS 746
Query: 260 KRLVFSTITAKMNLSDEVDLEDYVARPDRISGADINAICQEAGMHAVREN 309
+ + T + LSD V+L + + SGAD+ +C+EA ++R +
Sbjct: 747 RLKILKIKTKSIPLSDNVNLIEISNLTNGFSGADLENLCREASFQSLRRD 796
Score = 170 (64.9 bits), Expect = 1.6e-23, Sum P(2) = 1.6e-23
Identities = 50/178 (28%), Positives = 94/178 (52%)
Query: 3 LCTSFDTELVTA-FIRVVGSEFVQKYLGEGPRMVRDVFR------LAKENSPXXXXXXXX 55
+C ++D E+++ ++ GS Y+GE +R++F+ +AK NSP
Sbjct: 341 VCDAYDIEMISIDCAKISGS-----YIGETEENLRNIFQEASDKSIAKSNSPIVVFIDEI 395
Query: 56 XXXXTKRFDAQTGADREVQRILLELLNQMDGFD-QTTNVKVIMATNRADTLDPALLRPGR 114
R + + + R++ + L +DG + N+ +I ATNR + +D AL RPGR
Sbjct: 396 DTICPPR----SKSTQNESRVVGQFLTLLDGIGARKGNLIIIAATNRPNQIDNALRRPGR 451
Query: 115 LDRKIEFPLPDRRQKRLVFSTITAKMNLSDEV-DLEDYVARPDRIS--GADINAICQE 169
LDR+IE P+P+++Q+ + +K+ +S +L D +A + + GA+I +C++
Sbjct: 452 LDREIEIPVPNKQQRLDILKLYCSKLPISPTPSNLLDQIA-DETVGYVGANIQFLCRD 508
Score = 164 (62.8 bits), Expect = 7.1e-09, P = 7.1e-09
Identities = 46/153 (30%), Positives = 81/153 (52%)
Query: 201 RRQKRLVFSTITAKMNFMLNIGNLQVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQK 260
+ + R+V +T GNL +I ATNR + +D AL RPGRLDR+IE P+P+++Q+
Sbjct: 407 QNESRVVGQFLTLLDGIGARKGNLIIIAATNRPNQIDNALRRPGRLDREIEIPVPNKQQR 466
Query: 261 RLVFSTITAKMNLSDEV-DLEDYVARPDRIS--GADINAICQEAGMHAVRENRYIVLPKD 317
+ +K+ +S +L D +A + + GA+I +C+++ A ++Y +L
Sbjct: 467 LDILKLYCSKLPISPTPSNLLDQIA-DETVGYVGANIQFLCRDSAFIAF--SKYNLLK-- 521
Query: 318 FEKGYKKCAGMHAVRENRYIVLPKDFEKGYKNN 350
Y+ E +Y++ +DF + KNN
Sbjct: 522 ----YQNNEQNENENEKKYLIEIEDFRESIKNN 550
Score = 123 (48.4 bits), Expect = 0.00025, P = 0.00025
Identities = 47/163 (28%), Positives = 75/163 (46%)
Query: 86 GFDQTTNVKVIMATNRADTLD---PALLRP--GRLDRKIEFPLPDRRQKR---LVFSTIT 137
G +TT VK + ++++ L + P G ++ I RQ L F I
Sbjct: 614 GCSKTTLVKAVASSSKLSFLSLSGATIFSPYLGDSEQTIRDIFKKARQTTPSILFFDEID 673
Query: 138 A---KMNLSDEVDLEDYVARP-----DRISGAD-INAICQEVIMATNRADTLDPALLRPG 188
A K NLSD ++ +R + + G + +N + VI ATNR D +D ALLRPG
Sbjct: 674 AIVSKRNLSDNSSGDNAQSRVLSTFLNEMDGVEQLNGVI--VIGATNRLDMIDNALLRPG 731
Query: 189 RLDRKIEFPLPDRRQKRLVFSTITAKMNFMLNIGNLQVIMATN 231
R D+ +E LPD+ + + T + N+ +++ TN
Sbjct: 732 RFDKILEIKLPDQLSRLKILKIKTKSIPLSDNVNLIEISNLTN 774
>DICTYBASE|DDB_G0278435 [details] [associations]
symbol:DDB_G0278435 "AAA ATPase domain-containing
protein" species:44689 "Dictyostelium discoideum" [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0008150 "biological_process" evidence=ND]
[GO:0005575 "cellular_component" evidence=ND] [GO:0016887 "ATPase
activity" evidence=ISS] [GO:0006200 "ATP catabolic process"
evidence=ISS] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
dictyBase:DDB_G0278435 GO:GO:0005524 EMBL:AAFI02000023
GO:GO:0016887 eggNOG:COG0464 KO:K14575 InterPro:IPR009010
SUPFAM:SSF50692 RefSeq:XP_642364.1 ProteinModelPortal:Q54Y38
EnsemblProtists:DDB0237527 GeneID:8621569 KEGG:ddi:DDB_G0278435
InParanoid:Q54Y38 OMA:TSICREA Uniprot:Q54Y38
Length = 886
Score = 281 (104.0 bits), Expect = 1.9e-23, P = 1.9e-23
Identities = 63/177 (35%), Positives = 96/177 (54%)
Query: 2 LLCTSFDTELVTAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENSPXXXXXXXXXXXXTK 61
LL + TE FI V G E + K++GE R VRD+F+ A++NSP
Sbjct: 671 LLAKALATESGLNFIAVKGPELLSKWVGESERAVRDIFKKARQNSPSILFFDEIDGLAIS 730
Query: 62 RFDAQTGADREVQRILLELLNQMDGFDQTTNVKVIMATNRADTLDPALLRPGRLDRKIEF 121
R +GA V+R++ +LL +MDG TNV +I ATNR D +D A+LR GR+DR +
Sbjct: 731 RSGEGSGA---VERVVSQLLTEMDGIQPLTNVTIIGATNRPDIIDKAILRAGRIDRILYI 787
Query: 122 PLPDRRQKRLVFSTITAKMNLSDEVDLEDYVARPDRISGADINAICQEVIMATNRAD 178
PD ++ +F+ K+ S ++D+ D SGA++ +IC+E +A + D
Sbjct: 788 SPPDLDARKEIFNIHLKKVPHSSDIDINQLSILTDGYSGAEVTSICREASIAAMKED 844
Score = 162 (62.1 bits), Expect = 5.4e-21, Sum P(3) = 5.4e-21
Identities = 34/103 (33%), Positives = 61/103 (59%)
Query: 207 VFSTITAKMNFMLNIGNLQVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLVFST 266
V S + +M+ + + N+ +I ATNR D +D A+LR GR+DR + PD ++ +F+
Sbjct: 742 VVSQLLTEMDGIQPLTNVTIIGATNRPDIIDKAILRAGRIDRILYISPPDLDARKEIFNI 801
Query: 267 ITAKMNLSDEVDLEDYVARPDRISGADINAICQEAGMHAVREN 309
K+ S ++D+ D SGA++ +IC+EA + A++E+
Sbjct: 802 HLKKVPHSSDIDINQLSILTDGYSGAEVTSICREASIAAMKED 844
Score = 136 (52.9 bits), Expect = 5.4e-21, Sum P(3) = 5.4e-21
Identities = 37/131 (28%), Positives = 69/131 (52%)
Query: 93 VKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLVFSTITAKM-NLSDEVDLEDY 151
V VI TNR D++D AL RPGR D +IE +P+++ + + + +K+ N ++
Sbjct: 469 VIVIGCTNRPDSIDSALRRPGRFDNEIEISIPNQQGREQILNIFLSKIPNQLTSQEIAMI 528
Query: 152 VARPDRISGADINAICQEV-IMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRL--VF 208
++ GADI ++C+E + NR + L + ++++ E +++++ L +
Sbjct: 529 ASKTHGFVGADIESLCKEASLKCFNRIKNENQKLFQSINIEKE-EKGKEEKQEENLQNLL 587
Query: 209 STITAKMNFML 219
S I MN ML
Sbjct: 588 SLIKLSMNDML 598
Score = 128 (50.1 bits), Expect = 2.8e-07, Sum P(2) = 2.8e-07
Identities = 28/87 (32%), Positives = 50/87 (57%)
Query: 220 NIGNLQVIM--ATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLVFSTITAKM-NLSDE 276
N G +VI+ TNR D++D AL RPGR D +IE +P+++ + + + +K+ N
Sbjct: 463 NCGGDKVIVIGCTNRPDSIDSALRRPGRFDNEIEISIPNQQGREQILNIFLSKIPNQLTS 522
Query: 277 VDLEDYVARPDRISGADINAICQEAGM 303
++ ++ GADI ++C+EA +
Sbjct: 523 QEIAMIASKTHGFVGADIESLCKEASL 549
Score = 68 (29.0 bits), Expect = 5.4e-21, Sum P(3) = 5.4e-21
Identities = 21/91 (23%), Positives = 39/91 (42%)
Query: 2 LLCTSFDTELVTAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENSPXXXXXXXXXXXXTK 61
LL T+ + G++ + K+ G + ++ +F+ A + SP K
Sbjct: 361 LLARIVATQTNATLFTINGADILDKFYGMTEKTLQKIFKDAAQKSPSIIFIDELDALCPK 420
Query: 62 RFDAQTGADREVQRILLELLNQMDGFDQTTN 92
R D + ++ RI+ LL MDG T++
Sbjct: 421 REDNSSEVEK---RIVGSLLTLMDGVVSTSD 448
>UNIPROTKB|E1BFQ0 [details] [associations]
symbol:E1BFQ0 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0042407 "cristae formation" evidence=IEA] [GO:0034982
"mitochondrial protein processing" evidence=IEA] [GO:0008053
"mitochondrial fusion" evidence=IEA] [GO:0005739 "mitochondrion"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0016021
"integral to membrane" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0006508 "proteolysis" evidence=IEA] [GO:0004222
"metalloendopeptidase activity" evidence=IEA] HAMAP:MF_01458
InterPro:IPR000642 InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005936 InterPro:IPR011546
Pfam:PF00004 Pfam:PF01434 Pfam:PF06480 PROSITE:PS00674
SMART:SM00382 GO:GO:0016021 GO:GO:0005739 GO:GO:0005524
GO:GO:0008270 GO:GO:0006508 GO:GO:0004222 GO:GO:0030163
GeneTree:ENSGT00530000063070 OMA:WDEKDFR GO:GO:0017111
GO:GO:0042407 GO:GO:0008053 GO:GO:0034982 TIGRFAMs:TIGR01241
EMBL:DAAA02046282 IPI:IPI00707325 Ensembl:ENSBTAT00000056979
Uniprot:E1BFQ0
Length = 802
Score = 280 (103.6 bits), Expect = 2.0e-23, P = 2.0e-23
Identities = 71/190 (37%), Positives = 101/190 (53%)
Query: 2 LLCTSFDTELVTAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENSPXXXXXXXXXXXXTK 61
LL + E FI V GSEF++ ++G GP VRD+F LA++N+P K
Sbjct: 351 LLAKATAGEAGVPFITVNGSEFLEMFVGVGPARVRDMFALARKNAPCILFVDEIDAIGRK 410
Query: 62 RFDAQTGADREVQRILLELLNQMDGFDQTTNVKVIMATNRADTLDPALLRPGRLDRKIEF 121
R G E + L +LL +MDGF+ TTNV V+ TNR D LDPAL+RPGR DR+I
Sbjct: 411 RGRGHFGGQSEQENTLNQLLVEMDGFNSTTNVVVLAGTNRPDVLDPALMRPGRFDRQIYI 470
Query: 122 PLPDRRQKRLVFSTITAKMNLSDEVDLEDYVAR------PDRI-SGADINAICQEVIMAT 174
PD + + +F + L + + +D +AR P SGADI+ +C E +
Sbjct: 471 GPPDIKGRSSIFRVHLRPLKLDESLS-KDALARKLAALTPGFTGSGADISNVCNEAALIA 529
Query: 175 NRADTLDPAL 184
R L+P++
Sbjct: 530 ARH--LNPSV 537
Score = 155 (59.6 bits), Expect = 6.8e-08, P = 6.8e-08
Identities = 41/112 (36%), Positives = 59/112 (52%)
Query: 223 NLQVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLVFSTITAKMNLSDEVDLEDY 282
N+ V+ TNR D LDPAL+RPGR DR+I PD + + +F + L + + +D
Sbjct: 441 NVVVLAGTNRPDVLDPALMRPGRFDRQIYIGPPDIKGRSSIFRVHLRPLKLDESLS-KDA 499
Query: 283 VAR------PDRI-SGADINAICQEAGMHAVRENRYIVLPKDFEKGYKKCAG 327
+AR P SGADI+ +C EA + A R V K FE+ ++ G
Sbjct: 500 LARKLAALTPGFTGSGADISNVCNEAALIAARHLNPSVGEKHFEQAIERVIG 551
>TAIR|locus:2044209 [details] [associations]
symbol:CDC48B "cell division cycle 48B" species:3702
"Arabidopsis thaliana" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005886
"plasma membrane" evidence=ISM] [GO:0016887 "ATPase activity"
evidence=ISS] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0009560 "embryo sac egg cell differentiation"
evidence=RCA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0005634 EMBL:CP002685 GenomeReviews:CT485783_GR
GO:GO:0051301 GO:GO:0005856 GO:GO:0015031 GO:GO:0007049
eggNOG:COG0464 HOGENOM:HOG000223225 GO:GO:0017111 EMBL:AC006836
GO:GO:0009524 EMBL:AY062443 EMBL:BT008371 IPI:IPI00527776
PIR:A84451 RefSeq:NP_178463.1 UniGene:At.27340
ProteinModelPortal:Q9ZPR1 SMR:Q9ZPR1 PaxDb:Q9ZPR1 PRIDE:Q9ZPR1
EnsemblPlants:AT2G03670.1 GeneID:814895 KEGG:ath:AT2G03670
GeneFarm:1901 TAIR:At2g03670 InParanoid:Q9ZPR1 OMA:RECNAHL
PhylomeDB:Q9ZPR1 ProtClustDB:CLSN2683845 Genevestigator:Q9ZPR1
GermOnline:AT2G03670 Uniprot:Q9ZPR1
Length = 603
Score = 229 (85.7 bits), Expect = 1.4e-16, P = 1.4e-16
Identities = 50/157 (31%), Positives = 78/157 (49%)
Query: 14 AFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENSPXXXXXXXXXXXXTKRFDAQTGADREV 73
+F + +E Y+GEG ++R+ F+ A+ SP KR D + V
Sbjct: 347 SFFSLSCAELFSMYVGEGEALLRNTFQRARLASPSIIFFDEADVVACKRGDESSSNSSTV 406
Query: 74 -QRILLELLNQMDGFDQTTNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLV 132
+R+L LL +MDG ++ + V+ ATNR +D AL+RPGR D + P PD + +
Sbjct: 407 GERLLSTLLTEMDGLEEAKGILVLAATNRPYAIDAALMRPGRFDLVLYVPPPDLEARFEI 466
Query: 133 FSTITAKMNLSDEVDLEDYVARPDRISGADINAICQE 169
T M L D+VDL D +GA++ +C+E
Sbjct: 467 LQVHTRNMTLGDDVDLRKIAEETDLFTGAELEGLCRE 503
Score = 172 (65.6 bits), Expect = 3.1e-23, Sum P(2) = 3.1e-23
Identities = 37/106 (34%), Positives = 59/106 (55%)
Query: 204 KRLVFSTITAKMNFMLNIGNLQVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLV 263
+RL+ ST+ +M+ + + V+ ATNR +D AL+RPGR D + P PD + +
Sbjct: 408 ERLL-STLLTEMDGLEEAKGILVLAATNRPYAIDAALMRPGRFDLVLYVPPPDLEARFEI 466
Query: 264 FSTITAKMNLSDEVDLEDYVARPDRISGADINAICQEAGMHAVREN 309
T M L D+VDL D +GA++ +C+E+G ++REN
Sbjct: 467 LQVHTRNMTLGDDVDLRKIAEETDLFTGAELEGLCRESGTVSLREN 512
Score = 169 (64.5 bits), Expect = 3.1e-23, Sum P(2) = 3.1e-23
Identities = 49/174 (28%), Positives = 80/174 (45%)
Query: 14 AFIRVVGSEFVQK-YLGEGPRMVRDVFRLAKENS----PXXXXXXXXXXXXTKRFDAQTG 68
A + V+ V + + GE +++R+ F A ++ P +R DA+
Sbjct: 82 AHLIVLSPHSVHRAHAGESEKVLREAFAEASSHAVSDKPSVIFIDEIDVLCPRR-DARRE 140
Query: 69 ADREVQRILLELLNQMDGFDQTTNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQ 128
D + L L++ V V+ +TNR D +DPAL R GR D +E P+
Sbjct: 141 QDVRIASQLFTLMDSNKPSSSAPRVVVVASTNRVDAIDPALRRAGRFDALVEVSTPNEED 200
Query: 129 KRLVFSTITAKMNLSDEVDLEDYVARPDRISGADINAICQEV-IMATNRA-DTL 180
+ + T K+NL VDL+ + GAD+ A+C+E I A+ R+ D+L
Sbjct: 201 RLKILQLYTKKVNLDPSVDLQAIAISCNGYVGADLEALCREATISASKRSSDSL 254
Score = 158 (60.7 bits), Expect = 2.1e-08, P = 2.1e-08
Identities = 43/133 (32%), Positives = 66/133 (49%)
Query: 226 VIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLVFSTITAKMNLSDEVDLEDYVAR 285
V+ +TNR D +DPAL R GR D +E P+ + + T K+NL VDL+
Sbjct: 167 VVASTNRVDAIDPALRRAGRFDALVEVSTPNEEDRLKILQLYTKKVNLDPSVDLQAIAIS 226
Query: 286 PDRISGADINAICQEAGMHAVRENR--YIVLPKDFEKGYKKCAGMHAVRENRYIVLPK-- 341
+ GAD+ A+C+EA + A + + I+ +DF K K G ++ + +PK
Sbjct: 227 CNGYVGADLEALCREATISASKRSSDSLILTSQDF-KIAKSVVGP-SINRGITVEIPKVT 284
Query: 342 -DFEKGYKNNTKK 353
D G K+ KK
Sbjct: 285 WDDVGGLKDLKKK 297
Score = 81 (33.6 bits), Expect = 1.0e-13, Sum P(2) = 1.0e-13
Identities = 18/46 (39%), Positives = 24/46 (52%)
Query: 170 VIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLVFSTITAKM 215
V+ ATNR +D AL+RPGR D + P PD + + T M
Sbjct: 429 VLAATNRPYAIDAALMRPGRFDLVLYVPPPDLEARFEILQVHTRNM 474
>WB|WBGene00004978 [details] [associations]
symbol:spg-7 species:6239 "Caenorhabditis elegans"
[GO:0004222 "metalloendopeptidase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0006508 "proteolysis"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
[GO:0016020 "membrane" evidence=IEA] [GO:0030163 "protein catabolic
process" evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0009792
"embryo development ending in birth or egg hatching" evidence=IMP]
[GO:0040007 "growth" evidence=IMP] [GO:0002119 "nematode larval
development" evidence=IMP] [GO:0000003 "reproduction" evidence=IMP]
[GO:0040010 "positive regulation of growth rate" evidence=IMP]
[GO:0008340 "determination of adult lifespan" evidence=IMP]
[GO:0006898 "receptor-mediated endocytosis" evidence=IMP]
[GO:0030968 "endoplasmic reticulum unfolded protein response"
evidence=IMP] HAMAP:MF_01458 InterPro:IPR000642 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005936
InterPro:IPR011546 Pfam:PF00004 Pfam:PF01434 Pfam:PF06480
PROSITE:PS00674 SMART:SM00382 GO:GO:0016021 GO:GO:0005524
GO:GO:0008340 GO:GO:0009792 GO:GO:0006898 GO:GO:0040007
GO:GO:0040010 GO:GO:0002119 GO:GO:0008270 GO:GO:0006508
GO:GO:0000003 GO:GO:0004222 GO:GO:0030163 eggNOG:COG0465
GeneTree:ENSGT00530000063070 HOGENOM:HOG000217277 KO:K08956
GO:GO:0017111 TIGRFAMs:TIGR01241 OMA:LYRFVTT GO:GO:0030968
EMBL:FO081580 HSSP:Q9LCZ4 RefSeq:NP_491165.2
ProteinModelPortal:Q9N3T5 SMR:Q9N3T5 STRING:Q9N3T5 MEROPS:M41.A10
PaxDb:Q9N3T5 EnsemblMetazoa:Y47G6A.10 GeneID:171915
KEGG:cel:CELE_Y47G6A.10 UCSC:Y47G6A.10 CTD:171915
WormBase:Y47G6A.10 InParanoid:Q9N3T5 NextBio:873225 Uniprot:Q9N3T5
Length = 782
Score = 261 (96.9 bits), Expect = 4.2e-23, Sum P(2) = 4.2e-23
Identities = 68/179 (37%), Positives = 92/179 (51%)
Query: 2 LLCTSFDTELVTAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENSPXXXXXXXXXXXXTK 61
LL + E FI V GSEF++ ++G GP VRD+F +A++NSP K
Sbjct: 341 LLAKATAGEANVPFITVSGSEFLEMFVGVGPARVRDMFSMARKNSPCILFIDEIDAVGRK 400
Query: 62 RFD-AQTGADREVQRILLELLNQMDGFD-QTTNVKVIMATNRADTLDPALLRPGRLDRKI 119
R G E + L +LL +MDGF ++V VI ATNR D LD ALLRPGR DR+I
Sbjct: 401 RGGKGGMGGHSEQENTLNQLLVEMDGFTTDESSVIVIAATNRVDILDSALLRPGRFDRQI 460
Query: 120 EFPLPDRRQKRLVFSTITAKMNLS-DEVDLE-DYVARPDRISGADINAICQEVIMATNR 176
P+PD + + +F + S D+ L A SGADI+ +C E + R
Sbjct: 461 YVPVPDIKGRASIFRVHLGPLRTSLDKTVLSRKLAAHTPGFSGADISNVCNEAALIAAR 519
Score = 180 (68.4 bits), Expect = 1.1e-10, P = 1.1e-10
Identities = 49/132 (37%), Positives = 71/132 (53%)
Query: 217 FMLNIGNLQVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLVFSTITAKMNLS-D 275
F + ++ VI ATNR D LD ALLRPGR DR+I P+PD + + +F + S D
Sbjct: 427 FTTDESSVIVIAATNRVDILDSALLRPGRFDRQIYVPVPDIKGRASIFRVHLGPLRTSLD 486
Query: 276 EVDLE-DYVARPDRISGADINAICQEAGMHAVRENRYIVLPKDFEKGYKKC-AGMHAVRE 333
+ L A SGADI+ +C EA + A R+ + + K FE+ ++ AGM E
Sbjct: 487 KTVLSRKLAAHTPGFSGADISNVCNEAALIAARDANHEISNKHFEQAIERVVAGM----E 542
Query: 334 NRYIVLPKDFEK 345
+ VL K+ +K
Sbjct: 543 KKTQVLQKEEKK 554
Score = 41 (19.5 bits), Expect = 4.2e-23, Sum P(2) = 4.2e-23
Identities = 11/34 (32%), Positives = 17/34 (50%)
Query: 326 AGMHAVRENRYIVLPKDFEKGYKNNTKKDESEHE 359
+G + EN + LPK E K + KK + E +
Sbjct: 746 SGTGGLDEN--VELPKGLENWNKESEKKKKDEEK 777
>TAIR|locus:2009235 [details] [associations]
symbol:FTSH8 "FTSH protease 8" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0004222 "metalloendopeptidase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005739 "mitochondrion"
evidence=ISM] [GO:0006508 "proteolysis" evidence=IEA] [GO:0008237
"metallopeptidase activity" evidence=ISS] [GO:0008270 "zinc ion
binding" evidence=IEA;ISS] [GO:0016020 "membrane" evidence=IEA;IDA]
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0016887
"ATPase activity" evidence=ISS] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0004176
"ATP-dependent peptidase activity" evidence=ISS] [GO:0009941
"chloroplast envelope" evidence=IDA] [GO:0009507 "chloroplast"
evidence=IDA] [GO:0009535 "chloroplast thylakoid membrane"
evidence=IDA] [GO:0010304 "PSII associated light-harvesting complex
II catabolic process" evidence=TAS] [GO:0009579 "thylakoid"
evidence=IDA] [GO:0009534 "chloroplast thylakoid" evidence=IDA]
InterPro:IPR000642 InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005936 InterPro:IPR011546
Pfam:PF00004 Pfam:PF01434 Pfam:PF06480 PROSITE:PS00674
SMART:SM00382 GO:GO:0016021 GO:GO:0007275 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005524 GO:GO:0046872 GO:GO:0008270
GO:GO:0006508 GO:GO:0009941 GO:GO:0004222 EMBL:AC007592
eggNOG:COG0465 TIGRFAMs:TIGR01241 HSSP:Q9WZ49 GO:GO:0009535
GO:GO:0004176 HOGENOM:HOG000217276 KO:K03798 GO:GO:0010304
ProtClustDB:CLSN2679937 EMBL:AF419565 EMBL:BT002649 EMBL:BT003813
EMBL:AY045951 IPI:IPI00539195 RefSeq:NP_563766.3 UniGene:At.17054
ProteinModelPortal:Q8W585 SMR:Q8W585 STRING:Q8W585 MEROPS:M41.025
PaxDb:Q8W585 PRIDE:Q8W585 ProMEX:Q8W585 EnsemblPlants:AT1G06430.1
GeneID:837154 KEGG:ath:AT1G06430 GeneFarm:2474 TAIR:At1g06430
InParanoid:Q8W585 OMA:NANADEQ PhylomeDB:Q8W585
Genevestigator:Q8W585 Uniprot:Q8W585
Length = 685
Score = 274 (101.5 bits), Expect = 6.4e-23, P = 6.4e-23
Identities = 65/179 (36%), Positives = 92/179 (51%)
Query: 2 LLCTSFDTELVTAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENSPXXXXXXXXXXXXTK 61
LL + E F + GSEFV+ ++G G VRD+F+ AKEN+P +
Sbjct: 268 LLAKAIAGEAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEIDAVGRQ 327
Query: 62 RFDAQTGADREVQRILLELLNQMDGFDQTTNVKVIMATNRADTLDPALLRPGRLDRKIEF 121
R G + E ++ L +LL +MDGF+ T V V+ ATNRAD LD ALLRPGR DR++
Sbjct: 328 RGTGIGGGNDEREQTLNQLLTEMDGFEGNTGVIVVAATNRADILDSALLRPGRFDRQVSV 387
Query: 122 PLPDRRQKRLVFSTITAKMNLSDEVDLEDYVARPDRISGADI-NAICQEVIMATNRADT 179
+PD + + + + V LE R SGAD+ N + + I+A R T
Sbjct: 388 DVPDVKGRTDILKVHSGNKKFESGVSLEVIAMRTPGFSGADLANLLNEAAILAGRRGKT 446
Score = 158 (60.7 bits), Expect = 2.5e-08, P = 2.5e-08
Identities = 43/130 (33%), Positives = 63/130 (48%)
Query: 200 DRRQKRLVFSTITAKMNFMLNIGNLQVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQ 259
D R++ L +T F N G + V+ ATNRAD LD ALLRPGR DR++ +PD +
Sbjct: 337 DEREQTLN-QLLTEMDGFEGNTGVI-VVAATNRADILDSALLRPGRFDRQVSVDVPDVKG 394
Query: 260 KRLVFSTITAKMNLSDEVDLEDYVARPDRISGADINAICQEAGMHAVRENRYIVLPKDFE 319
+ + + V LE R SGAD+ + EA + A R + + K+ +
Sbjct: 395 RTDILKVHSGNKKFESGVSLEVIAMRTPGFSGADLANLLNEAAILAGRRGKTAISSKEID 454
Query: 320 KGYKKC-AGM 328
+ AGM
Sbjct: 455 DSIDRIVAGM 464
>TIGR_CMR|DET_0391 [details] [associations]
symbol:DET_0391 "ATP-dependent metalloprotease FtsH"
species:243164 "Dehalococcoides ethenogenes 195" [GO:0000910
"cytokinesis" evidence=ISS] [GO:0004222 "metalloendopeptidase
activity" evidence=ISS] [GO:0006508 "proteolysis" evidence=ISS]
[GO:0016887 "ATPase activity" evidence=ISS] HAMAP:MF_01458
InterPro:IPR000642 InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005936 InterPro:IPR011546
Pfam:PF00004 Pfam:PF01434 Pfam:PF06480 PROSITE:PS00674
SMART:SM00382 GO:GO:0016021 GO:GO:0005886 GO:GO:0005524
GO:GO:0046872 GO:GO:0008270 GO:GO:0006200 GO:GO:0006508
GO:GO:0004222 GO:GO:0016887 EMBL:CP000027 GenomeReviews:CP000027_GR
GO:GO:0030163 eggNOG:COG0465 TIGRFAMs:TIGR01241
HOGENOM:HOG000217276 KO:K03798 OMA:LEIIAMR MEROPS:M41.021
RefSeq:YP_181136.1 ProteinModelPortal:Q3Z9G3 SMR:Q3Z9G3
STRING:Q3Z9G3 GeneID:3230280 KEGG:det:DET0391 PATRIC:21607849
ProtClustDB:CLSK837509 BioCyc:DETH243164:GJNF-391-MONOMER
Uniprot:Q3Z9G3
Length = 608
Score = 272 (100.8 bits), Expect = 7.9e-23, P = 7.9e-23
Identities = 82/260 (31%), Positives = 126/260 (48%)
Query: 2 LLCTSFDTELVTAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENSPXXXXXXXXXXXXTK 61
LL + E F + GSEFV+ ++G G VRD+F AK+N+P +
Sbjct: 207 LLAKAIAGEAGVPFFSISGSEFVEMFVGVGASRVRDLFDQAKKNAPCIIFIDEIDAVGRQ 266
Query: 62 RFDAQTGADREVQRILLELLNQMDGFDQTTNVKVIMATNRADTLDPALLRPGRLDRKIEF 121
R G E ++ L ++L +MDGFD T+V VI ATNR D LDPALLRPGR DR++
Sbjct: 267 RGAGLGGGHDEREQTLNQILVEMDGFDTDTSVIVIAATNRPDILDPALLRPGRFDRRVVL 326
Query: 122 PLPDRRQKRLVFSTITAKMNLSDEVDLEDYVARPDRISGADI-NAICQEVIMATNR-ADT 179
PD + + L+D V+LE+ + SGAD+ N + + I+A +
Sbjct: 327 DKPDITGREAILKIHAKGKPLADTVNLENLAKQTVGFSGADLANLLNEAAILAARKNRKV 386
Query: 180 LDPALLRPGRLDRKIEFPLPDRRQKRLVFSTITAKMNFMLNIGNLQVIMATNRADTLDP- 238
++ L +DR I P +R+ +R+ ST ++ G+ V+ AD +
Sbjct: 387 VETEDLEES-IDRVIAGP--ERKSRRI--STQEKEVTAYHETGHGLVLRLVQGADPVHKI 441
Query: 239 ALLRPGR-LDRKIEFPLPDR 257
+++ G L + P DR
Sbjct: 442 SIVARGMTLGHTRQLPNEDR 461
Score = 178 (67.7 bits), Expect = 1.2e-10, P = 1.2e-10
Identities = 49/139 (35%), Positives = 74/139 (53%)
Query: 200 DRRQKRLVFSTITAKMNFMLNIGNLQVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQ 259
D R++ L + I +M+ ++ VI ATNR D LDPALLRPGR DR++ PD
Sbjct: 276 DEREQTL--NQILVEMDGFDTDTSVIVIAATNRPDILDPALLRPGRFDRRVVLDKPDITG 333
Query: 260 KRLVFSTITAKMNLSDEVDLEDYVARPDRISGADINAICQEAGMHAVRENRYIVLPKDFE 319
+ + L+D V+LE+ + SGAD+ + EA + A R+NR +V +D E
Sbjct: 334 REAILKIHAKGKPLADTVNLENLAKQTVGFSGADLANLLNEAAILAARKNRKVVETEDLE 393
Query: 320 KGYKKC-AGMHAVRENRYI 337
+ + AG R++R I
Sbjct: 394 ESIDRVIAGPE--RKSRRI 410
>TIGR_CMR|GSU_1809 [details] [associations]
symbol:GSU_1809 "cell division protein FtsH"
species:243231 "Geobacter sulfurreducens PCA" [GO:0000910
"cytokinesis" evidence=ISS] [GO:0004222 "metalloendopeptidase
activity" evidence=ISS] [GO:0016887 "ATPase activity" evidence=ISS]
HAMAP:MF_01458 InterPro:IPR000642 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005936
InterPro:IPR011546 Pfam:PF00004 Pfam:PF01434 Pfam:PF06480
PROSITE:PS00674 SMART:SM00382 GO:GO:0016021 GO:GO:0005886
GO:GO:0005524 GO:GO:0051301 GO:GO:0046872 GO:GO:0008270
GO:GO:0006200 GO:GO:0006508 GO:GO:0004222 GO:GO:0016887
EMBL:AE017180 GenomeReviews:AE017180_GR GO:GO:0030163
TIGRFAMs:TIGR01241 HOGENOM:HOG000217276 KO:K03798 MEROPS:M41.001
RefSeq:NP_952859.2 GeneID:2688702 KEGG:gsu:GSU1809 PATRIC:22026473
ProtClustDB:CLSK828573 BioCyc:GSUL243231:GH27-1860-MONOMER
Uniprot:Q74C66
Length = 610
Score = 267 (99.0 bits), Expect = 2.8e-22, P = 2.8e-22
Identities = 64/178 (35%), Positives = 92/178 (51%)
Query: 2 LLCTSFDTELVTAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENSPXXXXXXXXXXXXTK 61
LL + E F + GS+FV+ ++G G VRD+F K+N+P
Sbjct: 201 LLARAVAGEAGVPFFSISGSDFVEMFVGVGASRVRDLFVQGKKNAPCIIFIDEIDAVGRH 260
Query: 62 RFDAQTGADREVQRILLELLNQMDGFDQTTNVKVIMATNRADTLDPALLRPGRLDRKIEF 121
R G E ++ L +LL +MDGF+ V +I ATNR D LDPALLRPGR DR++
Sbjct: 261 RGAGLGGGHDEREQTLNQLLVEMDGFESNEGVILIAATNRPDVLDPALLRPGRFDRQVVV 320
Query: 122 PLPDRRQKRLVFSTITAKMNLSDEVDLEDYVAR-PDRISGADINAICQEVIMATNRAD 178
P PD + + ++ T K L+ +VDL +AR SGAD++ + E + R D
Sbjct: 321 PQPDVKGREMILKVHTKKTPLASDVDL-GVIARGTPGFSGADLSNVVNEAALLAARKD 377
Score = 201 (75.8 bits), Expect = 2.9e-13, P = 2.9e-13
Identities = 58/161 (36%), Positives = 90/161 (55%)
Query: 200 DRRQKRLVFSTITAKMN-FMLNIGNLQVIMATNRADTLDPALLRPGRLDRKIEFPLPDRR 258
D R++ L + + +M+ F N G + +I ATNR D LDPALLRPGR DR++ P PD +
Sbjct: 270 DEREQTL--NQLLVEMDGFESNEGVI-LIAATNRPDVLDPALLRPGRFDRQVVVPQPDVK 326
Query: 259 QKRLVFSTITAKMNLSDEVDLEDYVAR-PDRISGADINAICQEAGMHAVRENRYIVLPKD 317
+ ++ T K L+ +VDL +AR SGAD++ + EA + A R+++ V KD
Sbjct: 327 GREMILKVHTKKTPLASDVDL-GVIARGTPGFSGADLSNVVNEAALLAARKDKSFVEMKD 385
Query: 318 FEKGYKKCAGMHAVRENRYIVLPKDFEKGYKNNTKKDESEH 358
F+ K + V E R +V+ ++ +K NT E+ H
Sbjct: 386 FDDAKDKV--LMGV-ERRSMVISEEEKK----NTAYHEAGH 419
Score = 123 (48.4 bits), Expect = 0.00017, P = 0.00017
Identities = 35/115 (30%), Positives = 58/115 (50%)
Query: 170 VIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLVFSTITAKMNFMLNIGNLQVIM- 228
+I ATNR D LDPALLRPGR DR++ P PD + + ++ T K ++ +L VI
Sbjct: 294 LIAATNRPDVLDPALLRPGRFDRQVVVPQPDVKGREMILKVHTKKTPLASDV-DLGVIAR 352
Query: 229 ------ATNRADTLDPALLRPGRLDRK-IEFPLPDRRQKRLVFSTITAKMNLSDE 276
+ ++ ++ A L R D+ +E D + +++ M +S+E
Sbjct: 353 GTPGFSGADLSNVVNEAALLAARKDKSFVEMKDFDDAKDKVLMGVERRSMVISEE 407
>RGD|1309722 [details] [associations]
symbol:Afg3l1 "AFG3(ATPase family gene 3)-like 1 (S.
cerevisiae)" species:10116 "Rattus norvegicus" [GO:0004222
"metalloendopeptidase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005739 "mitochondrion" evidence=ISO]
[GO:0006508 "proteolysis" evidence=IEA] [GO:0007005 "mitochondrion
organization" evidence=ISO] [GO:0008053 "mitochondrial fusion"
evidence=ISO] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0034982
"mitochondrial protein processing" evidence=ISO] [GO:0042407
"cristae formation" evidence=ISO] HAMAP:MF_01458 InterPro:IPR000642
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005936 InterPro:IPR011546 Pfam:PF00004 Pfam:PF01434
Pfam:PF06480 PROSITE:PS00674 SMART:SM00382 RGD:1309722
GO:GO:0016021 GO:GO:0005739 GO:GO:0005524 GO:GO:0008270
GO:GO:0006508 GO:GO:0004222 GO:GO:0030163 GO:GO:0017111
GO:GO:0042407 GO:GO:0008053 GO:GO:0034982 TIGRFAMs:TIGR01241
IPI:IPI00365343 Ensembl:ENSRNOT00000065957 UCSC:RGD:1309722
ArrayExpress:F1LS61 Uniprot:F1LS61
Length = 761
Score = 268 (99.4 bits), Expect = 3.5e-22, P = 3.5e-22
Identities = 65/180 (36%), Positives = 93/180 (51%)
Query: 2 LLCTSFDTELVTAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENSPXXXXXXXXXXXXTK 61
LL + E FI V GSEF++ ++G GP VRD+F +A++++P K
Sbjct: 320 LLAKATAGEAKVPFITVNGSEFLEMFVGVGPARVRDMFAMARKHAPCILFIDEIDAIGRK 379
Query: 62 RFDAQTGADREVQRILLELLNQMDGFDQTTNVKVIMATNRADTLDPALLRPGRLDRKIEF 121
R G E + L ++L +MDGF+ TTNV V+ TNR D LDPAL RPGR DR+I
Sbjct: 380 RGRGHLGGQSEQENTLNQMLVEMDGFNSTTNVVVLAGTNRPDILDPALTRPGRFDRQIYI 439
Query: 122 PLPDRRQKRLVFSTITAKMNLSDEVDLEDYVARP-----DRISGADINAICQEVIMATNR 176
PD + + +F + L DE D ++R +GADI+ +C E + R
Sbjct: 440 GPPDIKGRSSIFKVHLRPLKL-DESLTRDALSRKLAALTPGFTGADISNVCNEAALIAAR 498
Score = 149 (57.5 bits), Expect = 3.0e-07, P = 3.0e-07
Identities = 39/110 (35%), Positives = 56/110 (50%)
Query: 223 NLQVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLVFSTITAKMNLSDEVDLEDY 282
N+ V+ TNR D LDPAL RPGR DR+I PD + + +F + L DE D
Sbjct: 410 NVVVLAGTNRPDILDPALTRPGRFDRQIYIGPPDIKGRSSIFKVHLRPLKL-DESLTRDA 468
Query: 283 VARP-----DRISGADINAICQEAGMHAVRENRYIVLPKDFEKGYKKCAG 327
++R +GADI+ +C EA + A R V + FE+ ++ G
Sbjct: 469 LSRKLAALTPGFTGADISNVCNEAALIAARHLSPSVQERHFEQAIERVIG 518
>ASPGD|ASPL0000062283 [details] [associations]
symbol:AN1366 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
EMBL:BN001308 HOGENOM:HOG000223225 GO:GO:0017111 OMA:REGFTTI
EnsemblFungi:CADANIAT00001245 Uniprot:C8VRW3
Length = 729
Score = 209 (78.6 bits), Expect = 4.6e-14, P = 4.6e-14
Identities = 56/181 (30%), Positives = 86/181 (47%)
Query: 2 LLCTSFDTELVTAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENSPXXXXXXXXXXXXTK 61
LL + E FI V G E + KY+GE R VR VF A+ + P +
Sbjct: 518 LLAKAVANESRANFISVKGPELLNKYVGESERAVRQVFVRARSSIPCVIFFDELDALVPR 577
Query: 62 RFDAQTGADREVQRILLELLNQMDGFDQTTN-VKVIMATNRADTLDPALLRPGRLDRKIE 120
R D + A R++ LL ++DG + + VI ATNR D +DPA+LRPGRL+ +
Sbjct: 578 RDDTLSEASA---RVVNTLLTELDGLGSSRQGIYVIAATNRPDIIDPAMLRPGRLETLLF 634
Query: 121 FPLPDRRQKRLVFSTITAKMNLSDEVDLEDYVARPDRISGADINAICQEV-IMATNRADT 179
LP ++ + T+ ++ + DL + SGAD+ ++ + A R DT
Sbjct: 635 VNLPSPLERVEILQTLVRRLPIEFNEDLRRLAEECEGFSGADLTSLLRRAGYNAIKRRDT 694
Query: 180 L 180
+
Sbjct: 695 I 695
Score = 191 (72.3 bits), Expect = 4.4e-22, Sum P(2) = 4.4e-22
Identities = 53/168 (31%), Positives = 81/168 (48%)
Query: 2 LLCTSFDTELVTAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENSPXXXXXXXXXXXXTK 61
++ +F EL FI + V GE + +R+ F AK +P K
Sbjct: 214 MIANAFAAELGVPFISISAPSIVSGMSGESEKALREHFEEAKRLAPCLIFIDEIDAITPK 273
Query: 62 RFDAQTGADREVQ-RILLELLNQMD--GFDQTTNVKVIM--ATNRADTLDPALLRPGRLD 116
R ++Q RE++ RI+ +LL MD ++T VI+ ATNR D+LD AL R GR D
Sbjct: 274 RENSQ----REMEKRIVAQLLTCMDDLALEKTDGKPVIVLAATNRPDSLDAALRRGGRFD 329
Query: 117 RKIEFPLPDRRQKRLVFSTITAKMNLSDEVDLEDYVARPDRISGADIN 164
++I +P + + +T KM L D++D + R GAD+N
Sbjct: 330 KEINMTVPSEPVREQILRALTRKMRLVDDLDFKTLAKRTPGFVGADLN 377
Score = 155 (59.6 bits), Expect = 6.0e-08, P = 6.0e-08
Identities = 39/117 (33%), Positives = 61/117 (52%)
Query: 203 QKRLVFSTITAKMNFMLNIGN---LQVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQ 259
+KR+V +T + L + + V+ ATNR D+LD AL R GR D++I +P
Sbjct: 282 EKRIVAQLLTCMDDLALEKTDGKPVIVLAATNRPDSLDAALRRGGRFDKEINMTVPSEPV 341
Query: 260 KRLVFSTITAKMNLSDEVDLEDYVARPDRISGADINAICQEAGMHAVRENRYIVLPK 316
+ + +T KM L D++D + R GAD+N + AG A++ RY+ L K
Sbjct: 342 REQILRALTRKMRLVDDLDFKTLAKRTPGFVGADLNDLVSTAGSTAIK--RYLDLLK 396
Score = 139 (54.0 bits), Expect = 4.4e-22, Sum P(2) = 4.4e-22
Identities = 28/84 (33%), Positives = 48/84 (57%)
Query: 224 LQVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLVFSTITAKMNLSDEVDLEDYV 283
+ VI ATNR D +DPA+LRPGRL+ + LP ++ + T+ ++ + DL
Sbjct: 607 IYVIAATNRPDIIDPAMLRPGRLETLLFVNLPSPLERVEILQTLVRRLPIEFNEDLRRLA 666
Query: 284 ARPDRISGADINAICQEAGMHAVR 307
+ SGAD+ ++ + AG +A++
Sbjct: 667 EECEGFSGADLTSLLRRAGYNAIK 690
Score = 98 (39.6 bits), Expect = 8.2e-18, Sum P(2) = 8.2e-18
Identities = 20/51 (39%), Positives = 30/51 (58%)
Query: 170 VIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLVFSTITAKMNFMLN 220
VI ATNR D +DPA+LRPGRL+ + LP ++ + T+ ++ N
Sbjct: 609 VIAATNRPDIIDPAMLRPGRLETLLFVNLPSPLERVEILQTLVRRLPIEFN 659
Score = 95 (38.5 bits), Expect = 1.7e-11, Sum P(2) = 1.7e-11
Identities = 19/49 (38%), Positives = 28/49 (57%)
Query: 170 VIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLVFSTITAKMNFM 218
V+ ATNR D+LD AL R GR D++I +P + + +T KM +
Sbjct: 308 VLAATNRPDSLDAALRRGGRFDKEINMTVPSEPVREQILRALTRKMRLV 356
>POMBASE|SPBC56F2.07c [details] [associations]
symbol:SPBC56F2.07c "ribosome biogenesis factor
recycling AAA family ATPase (predicted)" species:4896
"Schizosaccharomyces pombe" [GO:0005524 "ATP binding" evidence=ISM]
[GO:0005829 "cytosol" evidence=IDA] [GO:0016887 "ATPase activity"
evidence=ISM] [GO:0042273 "ribosomal large subunit biogenesis"
evidence=ISO] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
PomBase:SPBC56F2.07c GO:GO:0005829 GO:GO:0005524 EMBL:CU329671
GenomeReviews:CU329671_GR GO:GO:0016887 PIR:T40537
RefSeq:NP_596710.1 HSSP:Q01853 ProteinModelPortal:O60058
PRIDE:O60058 EnsemblFungi:SPBC56F2.07c.1 GeneID:2540537
KEGG:spo:SPBC56F2.07c eggNOG:COG0464 HOGENOM:HOG000223225 KO:K14575
OMA:SSENMAT OrthoDB:EOG49CTH0 NextBio:20801663 GO:GO:0042273
Uniprot:O60058
Length = 809
Score = 266 (98.7 bits), Expect = 6.4e-22, P = 6.4e-22
Identities = 59/161 (36%), Positives = 86/161 (53%)
Query: 9 TELVTAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENSPXXXXXXXXXXXXTKRFDAQTG 68
TE FI V G E K++GE R VR VF+ A++ SP R G
Sbjct: 604 TETGLNFIAVKGPELFDKFVGESERAVRQVFQKARQASPSVIFFDEIDALTANR-----G 658
Query: 69 ADREVQRILLELLNQMDGFDQTTNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQ 128
D R++ LLN++DG + NV V+ ATNR D +DPAL+RPGRLDR + P+
Sbjct: 659 EDNSSDRVVAALLNELDGIEALRNVLVLAATNRPDMIDPALMRPGRLDRLLYVGPPNFEA 718
Query: 129 KRLVFSTITAKMNLSDEVDLEDYVARPDRISGADINAICQE 169
++ + KM +++VDL+ + + SGA++ A+CQE
Sbjct: 719 RKQIVKIQAEKMKFAEDVDLDLIAEKTEGCSGAEVVALCQE 759
Score = 195 (73.7 bits), Expect = 2.2e-12, P = 2.2e-12
Identities = 58/194 (29%), Positives = 92/194 (47%)
Query: 20 GSEFVQKYLGEGPRMVRDVFRLAKENSPXXXXXXXXXXXXTKRFDAQTGADREVQRILLE 79
G V KYLGE +R +F A+ + P KR + + A+ R +
Sbjct: 346 GPSVVGKYLGETESRLRKIFEDARAHQPSIIFIDEIDALAPKRTEDVSEAE---SRAVAT 402
Query: 80 LLNQMDGFDQTTNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLVFSTITAK 139
LL +DG V VI ATNR +++D AL RPGRL+++IE +PD+ + + + +
Sbjct: 403 LLTLLDGMANAGKVVVIAATNRPNSIDEALRRPGRLEKEIEIGIPDKSARLDIIKLLLSG 462
Query: 140 M-NLSDEVDLEDYVARPDRISGADINAICQEVIM-ATNRA-----DTLDPALLRPGRLDR 192
+ N ++ LED +R GAD+ A+ +E + A R DT + ++D
Sbjct: 463 VPNEINDAQLEDLASRTHAYVGADLAAVVREAALRAIKRTISLQKDTSGLDIFGAVQMD- 521
Query: 193 KIEFPLPDRRQKRL 206
+EF L RQ +
Sbjct: 522 DLEFALSSVRQSAM 535
Score = 186 (70.5 bits), Expect = 2.3e-11, P = 2.3e-11
Identities = 49/175 (28%), Positives = 89/175 (50%)
Query: 135 TITAKMNLSDEVDLEDYVARPDRISGADINAICQEVIMATNRADTLDPALLRPGRLDRKI 194
TITAK ++ E L + + + + V +A P+++ +D
Sbjct: 596 TITAKA-IATETGLNFIAVKGPELFDKFVGESERAVRQVFQKARQASPSVIFFDEIDALT 654
Query: 195 EFPLPDRRQKRLVFSTITAKMNFMLNIGNLQVIMATNRADTLDPALLRPGRLDRKIEFPL 254
D R+V + + +++ + + N+ V+ ATNR D +DPAL+RPGRLDR +
Sbjct: 655 ANRGEDNSSDRVVAALLN-ELDGIEALRNVLVLAATNRPDMIDPALMRPGRLDRLLYVGP 713
Query: 255 PDRRQKRLVFSTITAKMNLSDEVDLEDYVARPDRISGADINAICQEAGMHAVREN 309
P+ ++ + KM +++VDL+ + + SGA++ A+CQEAG+ A+ E+
Sbjct: 714 PNFEARKQIVKIQAEKMKFAEDVDLDLIAEKTEGCSGAEVVALCQEAGLIAMHED 768
Score = 174 (66.3 bits), Expect = 5.3e-10, P = 5.3e-10
Identities = 41/116 (35%), Positives = 69/116 (59%)
Query: 203 QKRLVFSTITAKMNFMLNIGNLQVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRL 262
+ R V +T+ ++ M N G + VI ATNR +++D AL RPGRL+++IE +PD+ +
Sbjct: 396 ESRAV-ATLLTLLDGMANAGKVVVIAATNRPNSIDEALRRPGRLEKEIEIGIPDKSARLD 454
Query: 263 VFSTITAKM-NLSDEVDLEDYVARPDRISGADINAICQEAGMHAVRENRYIVLPKD 317
+ + + + N ++ LED +R GAD+ A+ +EA + A++ R I L KD
Sbjct: 455 IIKLLLSGVPNEINDAQLEDLASRTHAYVGADLAAVVREAALRAIK--RTISLQKD 508
>UNIPROTKB|Q2GIT4 [details] [associations]
symbol:ftsH "ATP-dependent zinc metalloprotease FtsH"
species:212042 "Anaplasma phagocytophilum HZ" [GO:0000910
"cytokinesis" evidence=ISS] [GO:0004222 "metalloendopeptidase
activity" evidence=ISS] [GO:0006200 "ATP catabolic process"
evidence=ISS] [GO:0006508 "proteolysis" evidence=ISS] [GO:0016887
"ATPase activity" evidence=ISS] HAMAP:MF_01458 InterPro:IPR000642
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005936 Pfam:PF00004 Pfam:PF01434 PROSITE:PS00674
SMART:SM00382 GO:GO:0016021 GO:GO:0005886 GO:GO:0005524
GO:GO:0046872 GO:GO:0008270 GO:GO:0006508 GO:GO:0004222
GO:GO:0016887 GO:GO:0000910 EMBL:CP000235 GenomeReviews:CP000235_GR
GO:GO:0030163 eggNOG:COG0465 TIGRFAMs:TIGR01241
HOGENOM:HOG000217276 KO:K03798 MEROPS:M41.001
ProtClustDB:CLSK749654 RefSeq:YP_505717.1 ProteinModelPortal:Q2GIT4
SMR:Q2GIT4 STRING:Q2GIT4 GeneID:3930902 KEGG:aph:APH_1179
PATRIC:20951138 OMA:GHAVVAM BioCyc:APHA212042:GHPM-1185-MONOMER
Uniprot:Q2GIT4
Length = 611
Score = 262 (97.3 bits), Expect = 9.7e-22, P = 9.7e-22
Identities = 78/282 (27%), Positives = 126/282 (44%)
Query: 2 LLCTSFDTELVTAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENSPXXXXXXXXXXXXTK 61
LL + E F + GS+FV+ ++G G VRD+F K+++P
Sbjct: 206 LLARAIAGEANVPFFSISGSDFVEMFVGVGASRVRDMFEQGKKHAPCIIFVDEIDAVGRH 265
Query: 62 RFDAQTGADREVQRILLELLNQMDGFDQTTNVKVIMATNRADTLDPALLRPGRLDRKIEF 121
R G + E ++ L +LL +MDGF+ V +I ATNR D LDPALLRPGR DR++
Sbjct: 266 RGIGLGGGNDEREQTLNQLLVEMDGFESNEGVVIIAATNRPDVLDPALLRPGRFDRQVTI 325
Query: 122 PLPDRRQKRLVFSTITAKMNLSDEVDLEDYVARPDRISGADINAICQEVIMATNRADTLD 181
+PD + + + K+ L+ +VDL SGAD+ + E + R LD
Sbjct: 326 SIPDINGREKIIAVHAKKVPLAPDVDLRVIARGTPGFSGADLANLVNEAALIAAR---LD 382
Query: 182 PALLRPGRLDRKIEFPLPDRRQKRLVFSTITAKMNFMLNIGNLQVIMATNRADTLDPALL 241
++ + + + +K +V ++ G+ V +D + A +
Sbjct: 383 KKIVTMCDFEYARDKVMMGAERKSMVMREEERRLTAYHEAGHAVVAFHNPASDPIHKATI 442
Query: 242 RP-GR-LDRKIEFPLPDR----RQKRLVFSTITAKMNLSDEV 277
P GR L + P DR R+K L T+ ++E+
Sbjct: 443 IPRGRSLGLVMRLPETDRVSHTREKMLADLTVAMGGRAAEEL 484
Score = 179 (68.1 bits), Expect = 9.4e-11, P = 9.4e-11
Identities = 49/136 (36%), Positives = 73/136 (53%)
Query: 200 DRRQKRLVFSTITAKMN-FMLNIGNLQVIMATNRADTLDPALLRPGRLDRKIEFPLPDRR 258
D R++ L + + +M+ F N G + +I ATNR D LDPALLRPGR DR++ +PD
Sbjct: 275 DEREQTL--NQLLVEMDGFESNEG-VVIIAATNRPDVLDPALLRPGRFDRQVTISIPDIN 331
Query: 259 QKRLVFSTITAKMNLSDEVDLEDYVARPDRISGADINAICQEAGMHAVRENRYIVLPKDF 318
+ + + K+ L+ +VDL SGAD+ + EA + A R ++ IV DF
Sbjct: 332 GREKIIAVHAKKVPLAPDVDLRVIARGTPGFSGADLANLVNEAALIAARLDKKIVTMCDF 391
Query: 319 EKGYKKCAGMHAVREN 334
E K M A R++
Sbjct: 392 EYARDKVM-MGAERKS 406
>TIGR_CMR|APH_1179 [details] [associations]
symbol:APH_1179 "ATP-dependent metalloprotease FtsH"
species:212042 "Anaplasma phagocytophilum HZ" [GO:0000910
"cytokinesis" evidence=ISS] [GO:0004222 "metalloendopeptidase
activity" evidence=ISS] [GO:0006508 "proteolysis" evidence=ISS]
[GO:0016887 "ATPase activity" evidence=ISS] HAMAP:MF_01458
InterPro:IPR000642 InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005936 Pfam:PF00004 Pfam:PF01434
PROSITE:PS00674 SMART:SM00382 GO:GO:0016021 GO:GO:0005886
GO:GO:0005524 GO:GO:0046872 GO:GO:0008270 GO:GO:0006508
GO:GO:0004222 GO:GO:0016887 GO:GO:0000910 EMBL:CP000235
GenomeReviews:CP000235_GR GO:GO:0030163 eggNOG:COG0465
TIGRFAMs:TIGR01241 HOGENOM:HOG000217276 KO:K03798 MEROPS:M41.001
ProtClustDB:CLSK749654 RefSeq:YP_505717.1 ProteinModelPortal:Q2GIT4
SMR:Q2GIT4 STRING:Q2GIT4 GeneID:3930902 KEGG:aph:APH_1179
PATRIC:20951138 OMA:GHAVVAM BioCyc:APHA212042:GHPM-1185-MONOMER
Uniprot:Q2GIT4
Length = 611
Score = 262 (97.3 bits), Expect = 9.7e-22, P = 9.7e-22
Identities = 78/282 (27%), Positives = 126/282 (44%)
Query: 2 LLCTSFDTELVTAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENSPXXXXXXXXXXXXTK 61
LL + E F + GS+FV+ ++G G VRD+F K+++P
Sbjct: 206 LLARAIAGEANVPFFSISGSDFVEMFVGVGASRVRDMFEQGKKHAPCIIFVDEIDAVGRH 265
Query: 62 RFDAQTGADREVQRILLELLNQMDGFDQTTNVKVIMATNRADTLDPALLRPGRLDRKIEF 121
R G + E ++ L +LL +MDGF+ V +I ATNR D LDPALLRPGR DR++
Sbjct: 266 RGIGLGGGNDEREQTLNQLLVEMDGFESNEGVVIIAATNRPDVLDPALLRPGRFDRQVTI 325
Query: 122 PLPDRRQKRLVFSTITAKMNLSDEVDLEDYVARPDRISGADINAICQEVIMATNRADTLD 181
+PD + + + K+ L+ +VDL SGAD+ + E + R LD
Sbjct: 326 SIPDINGREKIIAVHAKKVPLAPDVDLRVIARGTPGFSGADLANLVNEAALIAAR---LD 382
Query: 182 PALLRPGRLDRKIEFPLPDRRQKRLVFSTITAKMNFMLNIGNLQVIMATNRADTLDPALL 241
++ + + + +K +V ++ G+ V +D + A +
Sbjct: 383 KKIVTMCDFEYARDKVMMGAERKSMVMREEERRLTAYHEAGHAVVAFHNPASDPIHKATI 442
Query: 242 RP-GR-LDRKIEFPLPDR----RQKRLVFSTITAKMNLSDEV 277
P GR L + P DR R+K L T+ ++E+
Sbjct: 443 IPRGRSLGLVMRLPETDRVSHTREKMLADLTVAMGGRAAEEL 484
Score = 179 (68.1 bits), Expect = 9.4e-11, P = 9.4e-11
Identities = 49/136 (36%), Positives = 73/136 (53%)
Query: 200 DRRQKRLVFSTITAKMN-FMLNIGNLQVIMATNRADTLDPALLRPGRLDRKIEFPLPDRR 258
D R++ L + + +M+ F N G + +I ATNR D LDPALLRPGR DR++ +PD
Sbjct: 275 DEREQTL--NQLLVEMDGFESNEG-VVIIAATNRPDVLDPALLRPGRFDRQVTISIPDIN 331
Query: 259 QKRLVFSTITAKMNLSDEVDLEDYVARPDRISGADINAICQEAGMHAVRENRYIVLPKDF 318
+ + + K+ L+ +VDL SGAD+ + EA + A R ++ IV DF
Sbjct: 332 GREKIIAVHAKKVPLAPDVDLRVIARGTPGFSGADLANLVNEAALIAARLDKKIVTMCDF 391
Query: 319 EKGYKKCAGMHAVREN 334
E K M A R++
Sbjct: 392 EYARDKVM-MGAERKS 406
>SGD|S000003957 [details] [associations]
symbol:RIX7 "Putative ATPase of the AAA family" species:4932
"Saccharomyces cerevisiae" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA;IDA] [GO:0000055 "ribosomal large subunit
export from nucleus" evidence=IMP] [GO:0016887 "ATPase activity"
evidence=ISS] [GO:0005730 "nucleolus" evidence=IEA;IDA] [GO:0042254
"ribosome biogenesis" evidence=IEA] [GO:0042273 "ribosomal large
subunit biogenesis" evidence=IGI;IMP] [GO:0030687 "preribosome,
large subunit precursor" evidence=IDA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 SGD:S000003957
GO:GO:0005524 GO:GO:0005730 EMBL:BK006945 GO:GO:0016887
eggNOG:COG0464 HOGENOM:HOG000223225 GO:GO:0042273 GO:GO:0030687
GO:GO:0000055 KO:K14571 OMA:NDMTLKE GeneTree:ENSGT00570000079239
EMBL:Z73139 PIR:S64785 RefSeq:NP_013066.1 ProteinModelPortal:Q07844
SMR:Q07844 DIP:DIP-6385N IntAct:Q07844 MINT:MINT-621241
STRING:Q07844 PaxDb:Q07844 PeptideAtlas:Q07844 EnsemblFungi:YLL034C
GeneID:850625 KEGG:sce:YLL034C CYGD:YLL034c OrthoDB:EOG40GH00
NextBio:966532 Genevestigator:Q07844 GermOnline:YLL034C
Uniprot:Q07844
Length = 837
Score = 238 (88.8 bits), Expect = 1.8e-17, P = 1.8e-17
Identities = 59/180 (32%), Positives = 90/180 (50%)
Query: 2 LLCTSFDTELVTAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENSPXXXXXXXXXXXXTK 61
LL + E FI + G E + KY+GE R +R VF A+ + P +
Sbjct: 582 LLAKAVANESRANFISIKGPELLNKYVGESERSIRQVFTRARASVPCVIFFDELDALVPR 641
Query: 62 RFDAQTGADREVQRILLELLNQMDGFDQTTNVKVIMATNRADTLDPALLRPGRLDRKIEF 121
R T R++ LL ++DG + + VI ATNR D +DPA+LRPGRLD+ +
Sbjct: 642 R---DTSLSESSSRVVNTLLTELDGLNDRRGIFVIGATNRPDMIDPAMLRPGRLDKSLFI 698
Query: 122 PLPDRRQKRLVFSTITAKMN--LSDEVDLEDYVARP--DRISGADINAICQEV-IMATNR 176
LP+ +K + T+T LS +VD E+ + + SGAD+ A+ +E ++A R
Sbjct: 699 ELPNTEEKLDIIKTLTKSHGTPLSSDVDFEEIIRNEKCNNFSGADLAALVRESSVLALKR 758
Score = 166 (63.5 bits), Expect = 1.3e-21, Sum P(2) = 1.3e-21
Identities = 50/162 (30%), Positives = 75/162 (46%)
Query: 10 ELVTAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENSPXXXXXXXXXXXXTKRFDAQTGA 69
EL FI + V GE + +RD+F A+ +P KR D GA
Sbjct: 262 ELQVPFISISAPSVVSGMSGESEKKIRDLFDEARSLAPCLVFFDEIDAITPKR-DG--GA 318
Query: 70 DREVQR-ILLELLNQMDGFD-QTTNVK---VIMATNRADTLDPALLRPGRLDRKIEFPLP 124
RE++R I+ +LL MD + TN K +I ATNR D+LD AL R GR DR+I +P
Sbjct: 319 QREMERRIVAQLLTSMDELTMEKTNGKPVIIIGATNRPDSLDAALRRAGRFDREICLNVP 378
Query: 125 DRRQKRLVFSTITAKMNLSDEVDLEDYVARPDRISGADINAI 166
+ + + ++ + + +D GAD+ A+
Sbjct: 379 NEVSRLHILKKMSDNLKIDGAIDFAKLAKLTPGFVGADLKAL 420
Score = 164 (62.8 bits), Expect = 1.3e-21, Sum P(2) = 1.3e-21
Identities = 46/152 (30%), Positives = 78/152 (51%)
Query: 207 VFSTITAKMNFMLNIGNLQVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLVFST 266
V +T+ +++ + + + VI ATNR D +DPA+LRPGRLD+ + LP+ +K + T
Sbjct: 653 VVNTLLTELDGLNDRRGIFVIGATNRPDMIDPAMLRPGRLDKSLFIELPNTEEKLDIIKT 712
Query: 267 ITAKMN--LSDEVDLEDYVARP--DRISGADINAICQEAGMHAVR------ENRYIVLPK 316
+T LS +VD E+ + + SGAD+ A+ +E+ + A++ E VL
Sbjct: 713 LTKSHGTPLSSDVDFEEIIRNEKCNNFSGADLAALVRESSVLALKRKFFQSEEIQSVLDN 772
Query: 317 DFEKGYKKCAGMHAVRENRYIVLPKDFEKGYK 348
D +K ++ + V IV DF +
Sbjct: 773 DLDKEFEDLSV--GVSGEEIIVTMSDFRSALR 802
Score = 114 (45.2 bits), Expect = 2.2e-16, Sum P(2) = 2.2e-16
Identities = 22/43 (51%), Positives = 30/43 (69%)
Query: 170 VIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLVFSTIT 212
VI ATNR D +DPA+LRPGRLD+ + LP+ +K + T+T
Sbjct: 672 VIGATNRPDMIDPAMLRPGRLDKSLFIELPNTEEKLDIIKTLT 714
Score = 79 (32.9 bits), Expect = 1.6e-12, Sum P(2) = 1.6e-12
Identities = 17/31 (54%), Positives = 22/31 (70%)
Query: 170 VIMATNRADTLDPALLRPGRLDRKIEFPLPD 200
+I ATNR D+LD AL R GR DR+I +P+
Sbjct: 349 IIGATNRPDSLDAALRRAGRFDREICLNVPN 379
>DICTYBASE|DDB_G0282181 [details] [associations]
symbol:nvl "valosin-containing protein" species:44689
"Dictyostelium discoideum" [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0005730
"nucleolus" evidence=IEA;ISS] [GO:0000055 "ribosomal large subunit
export from nucleus" evidence=ISS] [GO:0042254 "ribosome
biogenesis" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 Pfam:PF00004 SMART:SM00382
dictyBase:DDB_G0282181 GO:GO:0005524 GO:GO:0005730
GenomeReviews:CM000152_GR EMBL:AAFI02000045 HSSP:Q01853
eggNOG:COG0464 GO:GO:0017111 GO:GO:0000055 KO:K14571
RefSeq:XP_640327.1 ProteinModelPortal:Q54SY2
EnsemblProtists:DDB0237516 GeneID:8623428 KEGG:ddi:DDB_G0282181
InParanoid:Q54SY2 OMA:KQIQYYK ProtClustDB:CLSZ2846768
Uniprot:Q54SY2
Length = 867
Score = 263 (97.6 bits), Expect = 1.5e-21, P = 1.5e-21
Identities = 62/178 (34%), Positives = 94/178 (52%)
Query: 2 LLCTSFDTELVTAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENSPXXXXXXXXXXXXTK 61
LL + +E FI V G E + KY+GE R VR VF+ A +SP K
Sbjct: 615 LLAKAIASECQANFISVKGPELLNKYVGESERAVRQVFQRAAASSPCVIFFDEFDALAPK 674
Query: 62 RFDAQTGADREVQRILLELLNQMDGFDQTTNVKVIMATNRADTLDPALLRPGRLDRKIEF 121
R G ++ +R++ +LL +MDG ++ + V +I ATNR D +D A+ RPGRLD+ +
Sbjct: 675 RGGGDGGGNQATERVVNQLLTEMDGLEKRSEVFIIAATNRPDIIDAAMCRPGRLDKMVYV 734
Query: 122 PLPDRRQKRLVFSTITAKMNLSDEVDLEDYVA--RPDRISGADINAICQEVIMATNRA 177
PLP ++ + T+T K+ + +VDL R SGAD++ + +E A N A
Sbjct: 735 PLPSPEERCEILKTLTHKIPIHQDVDLIKVGTDLRCHSFSGADLSLLVKE---AANHA 789
Score = 154 (59.3 bits), Expect = 1.5e-18, Sum P(3) = 1.5e-18
Identities = 36/105 (34%), Positives = 60/105 (57%)
Query: 204 KRLVFSTITAKMNFMLNIGNLQVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLV 263
+R+V +T +M+ + + +I ATNR D +D A+ RPGRLD+ + PLP ++ +
Sbjct: 687 ERVVNQLLT-EMDGLEKRSEVFIIAATNRPDIIDAAMCRPGRLDKMVYVPLPSPEERCEI 745
Query: 264 FSTITAKMNLSDEVDLEDYVA--RPDRISGADINAICQEAGMHAV 306
T+T K+ + +VDL R SGAD++ + +EA HA+
Sbjct: 746 LKTLTHKIPIHQDVDLIKVGTDLRCHSFSGADLSLLVKEAANHAI 790
Score = 141 (54.7 bits), Expect = 2.1e-07, Sum P(2) = 2.1e-07
Identities = 32/85 (37%), Positives = 49/85 (57%)
Query: 222 GNLQVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLVFSTITAKMNLSDEVDLED 281
G++ VI ATNR ++LD AL GR D++I +PD+ + + IT+KM L + D E+
Sbjct: 401 GHVIVIGATNRPESLDTALRIGGRFDKEICLGIPDQTARCKILKVITSKMRLENNFDYEE 460
Query: 282 YVARPDRISGADINAICQEAGMHAV 306
GADIN + +EA ++V
Sbjct: 461 IATLTPGYVGADINLLVKEAATNSV 485
Score = 134 (52.2 bits), Expect = 1.5e-18, Sum P(3) = 1.5e-18
Identities = 33/89 (37%), Positives = 49/89 (55%)
Query: 92 NVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLVFSTITAKMNLSDEVDLEDY 151
+V VI ATNR ++LD AL GR D++I +PD+ + + IT+KM L + D E+
Sbjct: 402 HVIVIGATNRPESLDTALRIGGRFDKEICLGIPDQTARCKILKVITSKMRLENNFDYEEI 461
Query: 152 VARPDRISGADINAICQEVIMATNRADTL 180
GADIN + +E ATN + +
Sbjct: 462 ATLTPGYVGADINLLVKEA--ATNSVNRI 488
Score = 110 (43.8 bits), Expect = 8.8e-14, Sum P(3) = 8.8e-14
Identities = 21/57 (36%), Positives = 35/57 (61%)
Query: 170 VIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLVFSTITAKMNFMLNIGNLQV 226
+I ATNR D +D A+ RPGRLD+ + PLP ++ + T+T K+ ++ ++V
Sbjct: 708 IIAATNRPDIIDAAMCRPGRLDKMVYVPLPSPEERCEILKTLTHKIPIHQDVDLIKV 764
Score = 55 (24.4 bits), Expect = 1.5e-18, Sum P(3) = 1.5e-18
Identities = 22/87 (25%), Positives = 31/87 (35%)
Query: 2 LLCTSFDTELVTAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENSPXXXXXXXXXXXXTK 61
LL + EL + +E GE VR +F A +P K
Sbjct: 265 LLAKAIAGELKVPLFAISATEITSGVSGESEARVRTLFSNAIAQAPCIIFIDEIDAIAPK 324
Query: 62 RFDAQTGADREVQRILLELLNQMDGFD 88
R A +R RI+ +LL MD +
Sbjct: 325 RESASKDMER---RIVSQLLTCMDSLN 348
>UNIPROTKB|P0C5C0 [details] [associations]
symbol:ftsH "ATP-dependent zinc metalloprotease FtsH"
species:1773 "Mycobacterium tuberculosis" [GO:0005829 "cytosol"
evidence=IDA] [GO:0005886 "plasma membrane" evidence=IDA]
[GO:0006508 "proteolysis" evidence=IMP;IDA] [GO:0006979 "response
to oxidative stress" evidence=IDA] [GO:0010468 "regulation of gene
expression" evidence=IDA] [GO:0016020 "membrane" evidence=IDA]
[GO:0030163 "protein catabolic process" evidence=IMP] [GO:0040007
"growth" evidence=IMP] HAMAP:MF_01458 InterPro:IPR000642
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005936 Pfam:PF00004 Pfam:PF01434 PROSITE:PS00674
SMART:SM00382 GO:GO:0016021 GO:GO:0005829 GO:GO:0005886
GO:GO:0005524 GO:GO:0040007 GO:GO:0006979 EMBL:AE000516
GenomeReviews:AE000516_GR GenomeReviews:AL123456_GR GO:GO:0046872
EMBL:BX842583 GO:GO:0006508 GO:GO:0004222 GO:GO:0030163
eggNOG:COG0465 GO:GO:0017111 TIGRFAMs:TIGR01241 GO:GO:0010468
HOGENOM:HOG000217276 KO:K03798 PIR:C70956 RefSeq:NP_218127.1
RefSeq:NP_338259.1 RefSeq:YP_006517099.1 ProteinModelPortal:P0C5C0
SMR:P0C5C0 PRIDE:P0C5C0 EnsemblBacteria:EBMYCT00000001212
EnsemblBacteria:EBMYCT00000069111 GeneID:13317218 GeneID:885732
GeneID:926520 KEGG:mtc:MT3714 KEGG:mtu:Rv3610c KEGG:mtv:RVBD_3610c
PATRIC:18129921 TubercuList:Rv3610c OMA:RSEMIAR
ProtClustDB:CLSK792593 Uniprot:P0C5C0
Length = 760
Score = 262 (97.3 bits), Expect = 1.5e-21, P = 1.5e-21
Identities = 73/209 (34%), Positives = 105/209 (50%)
Query: 2 LLCTSFDTELVTAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENSPXXXXXXXXXXXXTK 61
LL + E F + GS+FV+ ++G G VRD+F AK+NSP +
Sbjct: 211 LLARAVAGEAGVPFFTISGSDFVEMFVGVGASRVRDLFEQAKQNSPCIIFVDEIDAVGRQ 270
Query: 62 RFDAQTGADREVQRILLELLNQMDGFDQTTNVKVIMATNRADTLDPALLRPGRLDRKIEF 121
R G E ++ L +LL +MDGF V +I ATNR D LDPALLRPGR DR+I
Sbjct: 271 RGAGLGGGHDEREQTLNQLLVEMDGFGDRAGVILIAATNRPDILDPALLRPGRFDRQIPV 330
Query: 122 PLPDRRQKRLVFSTITAKMNLSDEVDLEDYVARPDRISGADINAICQEVIMATNRAD-TL 180
PD +R V + ++ + DL+ R ++GAD+ + E + T R + T+
Sbjct: 331 SNPDLAGRRAVLRVHSKGKPMAADADLDGLAKRTVGMTGADLANVINEAALLTARENGTV 390
Query: 181 --DPALLRPGRLDRKIEFPLPDRRQKRLV 207
PAL +DR I P RR+ R++
Sbjct: 391 ITGPALEEA--VDRVIGGP---RRKGRII 414
Score = 161 (61.7 bits), Expect = 1.4e-08, P = 1.4e-08
Identities = 40/128 (31%), Positives = 65/128 (50%)
Query: 200 DRRQKRLVFSTITAKMNFMLNIGNLQVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQ 259
D R++ L + + +M+ + + +I ATNR D LDPALLRPGR DR+I PD
Sbjct: 280 DEREQTL--NQLLVEMDGFGDRAGVILIAATNRPDILDPALLRPGRFDRQIPVSNPDLAG 337
Query: 260 KRLVFSTITAKMNLSDEVDLEDYVARPDRISGADINAICQEAGMHAVRENRYIVLPKDFE 319
+R V + ++ + DL+ R ++GAD+ + EA + REN ++ E
Sbjct: 338 RRAVLRVHSKGKPMAADADLDGLAKRTVGMTGADLANVINEAALLTARENGTVITGPALE 397
Query: 320 KGYKKCAG 327
+ + G
Sbjct: 398 EAVDRVIG 405
>UNIPROTKB|Q3AFJ8 [details] [associations]
symbol:ftsH "ATP-dependent zinc metalloprotease FtsH"
species:246194 "Carboxydothermus hydrogenoformans Z-2901"
[GO:0000910 "cytokinesis" evidence=ISS] [GO:0004222
"metalloendopeptidase activity" evidence=ISS] [GO:0006200 "ATP
catabolic process" evidence=ISS] [GO:0016887 "ATPase activity"
evidence=ISS] HAMAP:MF_01458 InterPro:IPR000642 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005936
InterPro:IPR011546 Pfam:PF00004 Pfam:PF01434 Pfam:PF06480
PROSITE:PS00674 SMART:SM00382 GO:GO:0016021 GO:GO:0005886
GO:GO:0005524 GO:GO:0046872 EMBL:CP000141 GenomeReviews:CP000141_GR
GO:GO:0008270 GO:GO:0006508 GO:GO:0004222 GO:GO:0016887
GO:GO:0000910 GO:GO:0030163 eggNOG:COG0465 TIGRFAMs:TIGR01241
HOGENOM:HOG000217276 KO:K03798 RefSeq:YP_359086.1
ProteinModelPortal:Q3AFJ8 SMR:Q3AFJ8 STRING:Q3AFJ8 MEROPS:M41.021
GeneID:3726212 KEGG:chy:CHY_0214 PATRIC:21273609 OMA:TGKADDE
BioCyc:CHYD246194:GJCN-215-MONOMER Uniprot:Q3AFJ8
Length = 619
Score = 259 (96.2 bits), Expect = 2.1e-21, P = 2.1e-21
Identities = 61/176 (34%), Positives = 89/176 (50%)
Query: 2 LLCTSFDTELVTAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENSPXXXXXXXXXXXXTK 61
LL + E F + GS+FV+ ++G G VRD+F AK+N+P +
Sbjct: 206 LLARAIAGEAGVPFFSISGSDFVEMFVGVGASRVRDLFEQAKKNAPCIVFIDEIDAVGRQ 265
Query: 62 RFDAQTGADREVQRILLELLNQMDGFDQTTNVKVIMATNRADTLDPALLRPGRLDRKIEF 121
R G E ++ L +LL +MDGF+ + +I ATNR D LDPALLRPGR DR I
Sbjct: 266 RGAGLGGGHDEREQTLNQLLVEMDGFNSNEGIIIIAATNRPDILDPALLRPGRFDRHIVV 325
Query: 122 PLPDRRQKRLVFSTITAKMNLSDEVDLEDYVARPDRISGADI-NAICQEVIMATNR 176
PD ++ + L D+VDL+ R +GAD+ N + + ++A R
Sbjct: 326 DTPDINGRKEILKVHVKGKPLGDDVDLDVLARRTPGFTGADLANMVNEAALLAARR 381
Score = 174 (66.3 bits), Expect = 3.5e-10, P = 3.5e-10
Identities = 43/126 (34%), Positives = 68/126 (53%)
Query: 200 DRRQKRLVFSTITAKMN-FMLNIGNLQVIMATNRADTLDPALLRPGRLDRKIEFPLPDRR 258
D R++ L + + +M+ F N G + +I ATNR D LDPALLRPGR DR I PD
Sbjct: 275 DEREQTL--NQLLVEMDGFNSNEGII-IIAATNRPDILDPALLRPGRFDRHIVVDTPDIN 331
Query: 259 QKRLVFSTITAKMNLSDEVDLEDYVARPDRISGADINAICQEAGMHAVRENRYIVLPKDF 318
++ + L D+VDL+ R +GAD+ + EA + A R N+ ++ ++
Sbjct: 332 GRKEILKVHVKGKPLGDDVDLDVLARRTPGFTGADLANMVNEAALLAARRNKKVINMEEM 391
Query: 319 EKGYKK 324
E+ ++
Sbjct: 392 EEAIER 397
>TIGR_CMR|CHY_0214 [details] [associations]
symbol:CHY_0214 "cell division protein FtsH"
species:246194 "Carboxydothermus hydrogenoformans Z-2901"
[GO:0000910 "cytokinesis" evidence=ISS] [GO:0004222
"metalloendopeptidase activity" evidence=ISS] [GO:0016887 "ATPase
activity" evidence=ISS] HAMAP:MF_01458 InterPro:IPR000642
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005936 InterPro:IPR011546 Pfam:PF00004 Pfam:PF01434
Pfam:PF06480 PROSITE:PS00674 SMART:SM00382 GO:GO:0016021
GO:GO:0005886 GO:GO:0005524 GO:GO:0046872 EMBL:CP000141
GenomeReviews:CP000141_GR GO:GO:0008270 GO:GO:0006508 GO:GO:0004222
GO:GO:0016887 GO:GO:0000910 GO:GO:0030163 eggNOG:COG0465
TIGRFAMs:TIGR01241 HOGENOM:HOG000217276 KO:K03798
RefSeq:YP_359086.1 ProteinModelPortal:Q3AFJ8 SMR:Q3AFJ8
STRING:Q3AFJ8 MEROPS:M41.021 GeneID:3726212 KEGG:chy:CHY_0214
PATRIC:21273609 OMA:TGKADDE BioCyc:CHYD246194:GJCN-215-MONOMER
Uniprot:Q3AFJ8
Length = 619
Score = 259 (96.2 bits), Expect = 2.1e-21, P = 2.1e-21
Identities = 61/176 (34%), Positives = 89/176 (50%)
Query: 2 LLCTSFDTELVTAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENSPXXXXXXXXXXXXTK 61
LL + E F + GS+FV+ ++G G VRD+F AK+N+P +
Sbjct: 206 LLARAIAGEAGVPFFSISGSDFVEMFVGVGASRVRDLFEQAKKNAPCIVFIDEIDAVGRQ 265
Query: 62 RFDAQTGADREVQRILLELLNQMDGFDQTTNVKVIMATNRADTLDPALLRPGRLDRKIEF 121
R G E ++ L +LL +MDGF+ + +I ATNR D LDPALLRPGR DR I
Sbjct: 266 RGAGLGGGHDEREQTLNQLLVEMDGFNSNEGIIIIAATNRPDILDPALLRPGRFDRHIVV 325
Query: 122 PLPDRRQKRLVFSTITAKMNLSDEVDLEDYVARPDRISGADI-NAICQEVIMATNR 176
PD ++ + L D+VDL+ R +GAD+ N + + ++A R
Sbjct: 326 DTPDINGRKEILKVHVKGKPLGDDVDLDVLARRTPGFTGADLANMVNEAALLAARR 381
Score = 174 (66.3 bits), Expect = 3.5e-10, P = 3.5e-10
Identities = 43/126 (34%), Positives = 68/126 (53%)
Query: 200 DRRQKRLVFSTITAKMN-FMLNIGNLQVIMATNRADTLDPALLRPGRLDRKIEFPLPDRR 258
D R++ L + + +M+ F N G + +I ATNR D LDPALLRPGR DR I PD
Sbjct: 275 DEREQTL--NQLLVEMDGFNSNEGII-IIAATNRPDILDPALLRPGRFDRHIVVDTPDIN 331
Query: 259 QKRLVFSTITAKMNLSDEVDLEDYVARPDRISGADINAICQEAGMHAVRENRYIVLPKDF 318
++ + L D+VDL+ R +GAD+ + EA + A R N+ ++ ++
Sbjct: 332 GRKEILKVHVKGKPLGDDVDLDVLARRTPGFTGADLANMVNEAALLAARRNKKVINMEEM 391
Query: 319 EKGYKK 324
E+ ++
Sbjct: 392 EEAIER 397
>MGI|MGI:1928277 [details] [associations]
symbol:Afg3l1 "AFG3(ATPase family gene 3)-like 1 (yeast)"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0004222 "metalloendopeptidase activity"
evidence=ISA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005739
"mitochondrion" evidence=IDA] [GO:0006508 "proteolysis"
evidence=IEA] [GO:0007005 "mitochondrion organization"
evidence=IGI] [GO:0008053 "mitochondrial fusion" evidence=IGI]
[GO:0008152 "metabolic process" evidence=ISA] [GO:0008233
"peptidase activity" evidence=IEA] [GO:0008237 "metallopeptidase
activity" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0016020 "membrane" evidence=IEA] [GO:0016021
"integral to membrane" evidence=IEA] [GO:0016787 "hydrolase
activity" evidence=IEA] [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0034982 "mitochondrial protein processing"
evidence=IGI] [GO:0042407 "cristae formation" evidence=IGI]
[GO:0046872 "metal ion binding" evidence=IEA] InterPro:IPR000642
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005936 InterPro:IPR011546 Pfam:PF00004 Pfam:PF01434
Pfam:PF06480 PROSITE:PS00674 SMART:SM00382 MGI:MGI:1928277
GO:GO:0016021 GO:GO:0005739 GO:GO:0005524 GO:GO:0031966
GO:GO:0046872 GO:GO:0008270 GO:GO:0006508 GO:GO:0004222
GO:GO:0030163 EMBL:AK012394 EMBL:AK159647 EMBL:AK167964
EMBL:AK168244 EMBL:BC056978 EMBL:AF329695 IPI:IPI00468514
IPI:IPI00652659 RefSeq:NP_473411.2 UniGene:Mm.287475
ProteinModelPortal:Q920A7 SMR:Q920A7 IntAct:Q920A7 STRING:Q920A7
MEROPS:M41.016 PhosphoSite:Q920A7 PaxDb:Q920A7 PRIDE:Q920A7
Ensembl:ENSMUST00000001520 Ensembl:ENSMUST00000098320 GeneID:114896
KEGG:mmu:114896 UCSC:uc009nwd.2 CTD:114896 eggNOG:COG0465
GeneTree:ENSGT00530000063070 HOGENOM:HOG000217277
HOVERGEN:HBG050184 InParanoid:Q920A7 KO:K08956 OMA:WDEKDFR
OrthoDB:EOG4SBDXC NextBio:368917 Bgee:Q920A7 CleanEx:MM_AFG3L1
Genevestigator:Q920A7 GermOnline:ENSMUSG00000031967 GO:GO:0017111
GO:GO:0042407 GO:GO:0008053 GO:GO:0034982 TIGRFAMs:TIGR01241
Uniprot:Q920A7
Length = 789
Score = 260 (96.6 bits), Expect = 2.7e-21, P = 2.7e-21
Identities = 62/180 (34%), Positives = 93/180 (51%)
Query: 2 LLCTSFDTELVTAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENSPXXXXXXXXXXXXTK 61
LL + E FI V GSEF++ ++G GP VRD+F +A++++P K
Sbjct: 348 LLAKATAGEANVPFITVNGSEFLEMFVGVGPARVRDMFAMARKHAPCILFIDEIDAIGRK 407
Query: 62 RFDAQTGADREVQRILLELLNQMDGFDQTTNVKVIMATNRADTLDPALLRPGRLDRKIEF 121
R G E + L ++L +MDGF+ +TNV V+ TNR D LDPAL RPGR DR+I
Sbjct: 408 RGRGHLGGQSEQENTLNQMLVEMDGFNSSTNVVVLAGTNRPDILDPALTRPGRFDRQIYI 467
Query: 122 PLPDRRQKRLVFSTITAKMNLSDEVDLEDYVARP-----DRISGADINAICQEVIMATNR 176
PD + + +F + L + +D ++R +GADI+ +C E + R
Sbjct: 468 GPPDIKGRSSIFKVHLRPLKLDGSLS-KDALSRKLAALTPGFTGADISNVCNEAALIAAR 526
Score = 146 (56.5 bits), Expect = 6.7e-07, P = 6.7e-07
Identities = 37/110 (33%), Positives = 56/110 (50%)
Query: 223 NLQVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLVFSTITAKMNLSDEVDLEDY 282
N+ V+ TNR D LDPAL RPGR DR+I PD + + +F + L + +D
Sbjct: 438 NVVVLAGTNRPDILDPALTRPGRFDRQIYIGPPDIKGRSSIFKVHLRPLKLDGSLS-KDA 496
Query: 283 VARP-----DRISGADINAICQEAGMHAVRENRYIVLPKDFEKGYKKCAG 327
++R +GADI+ +C EA + A R V + FE+ ++ G
Sbjct: 497 LSRKLAALTPGFTGADISNVCNEAALIAARHLSPSVQERHFEQAIERVIG 546
>CGD|CAL0000075 [details] [associations]
symbol:AFG3 species:5476 "Candida albicans" [GO:0005886
"plasma membrane" evidence=IDA] [GO:0005745 "m-AAA complex"
evidence=IEA] [GO:0097002 "mitochondrial inner boundary membrane"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0006508
"proteolysis" evidence=IEA] [GO:0006461 "protein complex assembly"
evidence=IEA] [GO:0006465 "signal peptide processing" evidence=IEA]
[GO:0008237 "metallopeptidase activity" evidence=IEA] [GO:0016887
"ATPase activity" evidence=IEA] HAMAP:MF_01458 InterPro:IPR000642
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005936 InterPro:IPR011546 Pfam:PF00004 Pfam:PF01434
Pfam:PF06480 PROSITE:PS00674 SMART:SM00382 CGD:CAL0000075
GO:GO:0016021 GO:GO:0005886 GO:GO:0005524 GO:GO:0008270
GO:GO:0006508 GO:GO:0004222 GO:GO:0030163 eggNOG:COG0465 KO:K08956
GO:GO:0017111 TIGRFAMs:TIGR01241 MEROPS:M41.002 EMBL:AACQ01000014
EMBL:AACQ01000013 RefSeq:XP_721627.1 RefSeq:XP_721746.1
ProteinModelPortal:Q5AJC2 SMR:Q5AJC2 STRING:Q5AJC2 GeneID:3636589
GeneID:3636771 KEGG:cal:CaO19.1669 KEGG:cal:CaO19.9238
Uniprot:Q5AJC2
Length = 795
Score = 247 (92.0 bits), Expect = 3.0e-21, Sum P(2) = 3.0e-21
Identities = 55/148 (37%), Positives = 80/148 (54%)
Query: 2 LLCTSFDTELVTAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENSPXXXXXXXXXXXXTK 61
LL + E F+ V GSEFV+ ++G G VRD+F+ A+E +P +
Sbjct: 335 LLAKATAGEAGVPFLSVSGSEFVEMFVGVGASRVRDLFKTAREMAPAIIFVDEIDAIGKE 394
Query: 62 RFDAQTGADREVQRILLELLNQMDGFDQTTNVKVIMATNRADTLDPALLRPGRLDRKIEF 121
R + + G + E + L +LL +MDGFD T +V V+ TNR D LD ALLRPGR DR I
Sbjct: 395 RGNGRMGGNDERENTLNQLLVEMDGFDTTDHVVVLAGTNRPDILDKALLRPGRFDRHISI 454
Query: 122 PLPDRRQKRLVFSTITAKMNLSDEVDLE 149
+PD ++ +F K+ L D++
Sbjct: 455 DVPDVEGRKQIFKVHLNKLKLKSVQDID 482
Score = 103 (41.3 bits), Expect = 0.00080, Sum P(2) = 0.00080
Identities = 21/46 (45%), Positives = 27/46 (58%)
Query: 170 VIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLVFSTITAKM 215
V+ TNR D LD ALLRPGR DR I +PD ++ +F K+
Sbjct: 428 VLAGTNRPDILDKALLRPGRFDRHISIDVPDVEGRKQIFKVHLNKL 473
Score = 60 (26.2 bits), Expect = 3.0e-21, Sum P(2) = 3.0e-21
Identities = 25/88 (28%), Positives = 40/88 (45%)
Query: 256 DRRQKRLVFSTITAKMNLSDEVDLEDYVARPDRISGADINAICQEAGMHAVRENRYIVLP 315
D +QK + FS N E A +GADI C E + A RE+ V
Sbjct: 482 DAKQKDVDFSKYQQLKNEEIEKLAGRLAALTPGFAGADIANCCNEGALIAAREDAPAVDT 541
Query: 316 KDFEKGYKKC-AGMHAVRENRYIVLPKD 342
FE+ ++ AG+ +++R I+ P++
Sbjct: 542 YHFEQAIERVIAGLE--KKSR-ILSPEE 566
>UNIPROTKB|Q5AJC2 [details] [associations]
symbol:AFG3 "Putative uncharacterized protein"
species:237561 "Candida albicans SC5314" [GO:0005886 "plasma
membrane" evidence=IDA] HAMAP:MF_01458 InterPro:IPR000642
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005936 InterPro:IPR011546 Pfam:PF00004 Pfam:PF01434
Pfam:PF06480 PROSITE:PS00674 SMART:SM00382 CGD:CAL0000075
GO:GO:0016021 GO:GO:0005886 GO:GO:0005524 GO:GO:0008270
GO:GO:0006508 GO:GO:0004222 GO:GO:0030163 eggNOG:COG0465 KO:K08956
GO:GO:0017111 TIGRFAMs:TIGR01241 MEROPS:M41.002 EMBL:AACQ01000014
EMBL:AACQ01000013 RefSeq:XP_721627.1 RefSeq:XP_721746.1
ProteinModelPortal:Q5AJC2 SMR:Q5AJC2 STRING:Q5AJC2 GeneID:3636589
GeneID:3636771 KEGG:cal:CaO19.1669 KEGG:cal:CaO19.9238
Uniprot:Q5AJC2
Length = 795
Score = 247 (92.0 bits), Expect = 3.0e-21, Sum P(2) = 3.0e-21
Identities = 55/148 (37%), Positives = 80/148 (54%)
Query: 2 LLCTSFDTELVTAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENSPXXXXXXXXXXXXTK 61
LL + E F+ V GSEFV+ ++G G VRD+F+ A+E +P +
Sbjct: 335 LLAKATAGEAGVPFLSVSGSEFVEMFVGVGASRVRDLFKTAREMAPAIIFVDEIDAIGKE 394
Query: 62 RFDAQTGADREVQRILLELLNQMDGFDQTTNVKVIMATNRADTLDPALLRPGRLDRKIEF 121
R + + G + E + L +LL +MDGFD T +V V+ TNR D LD ALLRPGR DR I
Sbjct: 395 RGNGRMGGNDERENTLNQLLVEMDGFDTTDHVVVLAGTNRPDILDKALLRPGRFDRHISI 454
Query: 122 PLPDRRQKRLVFSTITAKMNLSDEVDLE 149
+PD ++ +F K+ L D++
Sbjct: 455 DVPDVEGRKQIFKVHLNKLKLKSVQDID 482
Score = 103 (41.3 bits), Expect = 0.00080, Sum P(2) = 0.00080
Identities = 21/46 (45%), Positives = 27/46 (58%)
Query: 170 VIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLVFSTITAKM 215
V+ TNR D LD ALLRPGR DR I +PD ++ +F K+
Sbjct: 428 VLAGTNRPDILDKALLRPGRFDRHISIDVPDVEGRKQIFKVHLNKL 473
Score = 60 (26.2 bits), Expect = 3.0e-21, Sum P(2) = 3.0e-21
Identities = 25/88 (28%), Positives = 40/88 (45%)
Query: 256 DRRQKRLVFSTITAKMNLSDEVDLEDYVARPDRISGADINAICQEAGMHAVRENRYIVLP 315
D +QK + FS N E A +GADI C E + A RE+ V
Sbjct: 482 DAKQKDVDFSKYQQLKNEEIEKLAGRLAALTPGFAGADIANCCNEGALIAAREDAPAVDT 541
Query: 316 KDFEKGYKKC-AGMHAVRENRYIVLPKD 342
FE+ ++ AG+ +++R I+ P++
Sbjct: 542 YHFEQAIERVIAGLE--KKSR-ILSPEE 566
>SGD|S000004695 [details] [associations]
symbol:YTA12 "Component of the mitochondrial inner membrane
m-AAA protease" species:4932 "Saccharomyces cerevisiae" [GO:0016887
"ATPase activity" evidence=ISS;IDA;IMP] [GO:0005515 "protein
binding" evidence=IPI] [GO:0005739 "mitochondrion"
evidence=IEA;IDA] [GO:0006508 "proteolysis" evidence=IEA;IMP]
[GO:0016020 "membrane" evidence=IEA] [GO:0046872 "metal ion
binding" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA;IDA]
[GO:0008233 "peptidase activity" evidence=IEA] [GO:0008237
"metallopeptidase activity" evidence=IEA;IMP] [GO:0016021 "integral
to membrane" evidence=IEA] [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0097002 "mitochondrial inner boundary membrane"
evidence=IDA] [GO:0005743 "mitochondrial inner membrane"
evidence=IDA] [GO:0045041 "protein import into mitochondrial
intermembrane space" evidence=TAS] [GO:0005737 "cytoplasm"
evidence=IDA] [GO:0006461 "protein complex assembly" evidence=IMP]
[GO:0006465 "signal peptide processing" evidence=IMP] [GO:0005745
"m-AAA complex" evidence=IDA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0030163 "protein catabolic process" evidence=IEA]
[GO:0004222 "metalloendopeptidase activity" evidence=IEA]
[GO:0031966 "mitochondrial membrane" evidence=IEA]
InterPro:IPR000642 InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005936 InterPro:IPR011546
Pfam:PF00004 Pfam:PF01434 Pfam:PF06480 PROSITE:PS00674
SMART:SM00382 SGD:S000004695 EMBL:U09358 GO:GO:0005524
GO:GO:0006461 GO:GO:0046872 GO:GO:0008270 GO:GO:0006508
GO:GO:0008237 GO:GO:0004222 GO:GO:0016887 EMBL:BK006946
GO:GO:0030163 EMBL:Z49259 eggNOG:COG0465
GeneTree:ENSGT00530000063070 KO:K08956 TIGRFAMs:TIGR01241
OrthoDB:EOG4J14HG GO:GO:0005745 GO:GO:0097002 GO:GO:0045041
GO:GO:0006465 EMBL:X81068 EMBL:AY693099 PIR:S54465
RefSeq:NP_013807.1 ProteinModelPortal:P40341 SMR:P40341
DIP:DIP-889N IntAct:P40341 MINT:MINT-596896 STRING:P40341
MEROPS:M41.003 PaxDb:P40341 PeptideAtlas:P40341
EnsemblFungi:YMR089C GeneID:855114 KEGG:sce:YMR089C CYGD:YMR089c
OMA:NFSGAND NextBio:978455 Genevestigator:P40341 GermOnline:YMR089C
Uniprot:P40341
Length = 825
Score = 259 (96.2 bits), Expect = 3.8e-21, P = 3.8e-21
Identities = 64/180 (35%), Positives = 94/180 (52%)
Query: 2 LLCTSFDTELVTAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENSPXXXXXXXXXXXXTK 61
LL + E F V GSEFV+ ++G G VRD+F+ A+EN+P
Sbjct: 396 LLAKATAGEAGVPFYFVSGSEFVEMFVGVGAARVRDLFKTARENAPSIVFIDEIDAIGKA 455
Query: 62 RFDAQ-TGADREVQRILLELLNQMDGFDQTTNVKVIMATNRADTLDPALLRPGRLDRKIE 120
R +GA+ E + L ++L +MDGF +V V+ TNR D LD ALLRPGR DR I
Sbjct: 456 RQKGNFSGANDERENTLNQMLVEMDGFTPADHVVVLAGTNRPDILDKALLRPGRFDRHIN 515
Query: 121 FPLPDRRQKRLVFSTITAKMNLSDEV-DLEDYVAR-PDRISGADINAICQEVIMATNRAD 178
P+ ++ +F+ + L+ E+ DL++ +A SGADI +C E + R+D
Sbjct: 516 IDKPELEGRKAIFAVHLHHLKLAGEIFDLKNRLAALTPGFSGADIANVCNEAALIAARSD 575
Score = 164 (62.8 bits), Expect = 7.1e-09, P = 7.1e-09
Identities = 44/145 (30%), Positives = 73/145 (50%)
Query: 200 DRRQKRLVFSTITAKMNFMLNIGNLQVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQ 259
D R+ L + + +M+ ++ V+ TNR D LD ALLRPGR DR I P+
Sbjct: 466 DERENTL--NQMLVEMDGFTPADHVVVLAGTNRPDILDKALLRPGRFDRHINIDKPELEG 523
Query: 260 KRLVFSTITAKMNLSDEV-DLEDYVAR-PDRISGADINAICQEAGMHAVRENRYIVLPKD 317
++ +F+ + L+ E+ DL++ +A SGADI +C EA + A R + V
Sbjct: 524 RKAIFAVHLHHLKLAGEIFDLKNRLAALTPGFSGADIANVCNEAALIAARSDEDAVKLNH 583
Query: 318 FEKGYKKCAGMHAVRENRYIVLPKD 342
FE+ ++ G V ++ P++
Sbjct: 584 FEQAIERVIG--GVERKSKLLSPEE 606
>FB|FBgn0032450 [details] [associations]
symbol:CG5776 species:7227 "Drosophila melanogaster"
[GO:0016887 "ATPase activity" evidence=ISS] [GO:0005783
"endoplasmic reticulum" evidence=ISS] [GO:0005524 "ATP binding"
evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 EMBL:AE014134 GO:GO:0006200 GO:GO:0016887 HSSP:Q01853
eggNOG:COG0464 KO:K14575 GeneTree:ENSGT00700000104502 OMA:MLLRCVA
EMBL:AY051725 RefSeq:NP_609585.1 UniGene:Dm.8715 SMR:Q9VK63
EnsemblMetazoa:FBtr0080407 EnsemblMetazoa:FBtr0329925 GeneID:34680
KEGG:dme:Dmel_CG5776 UCSC:CG5776-RA FlyBase:FBgn0032450
InParanoid:Q9VK63 OrthoDB:EOG4547DV GenomeRNAi:34680 NextBio:789659
Uniprot:Q9VK63
Length = 799
Score = 257 (95.5 bits), Expect = 5.8e-21, P = 5.8e-21
Identities = 56/173 (32%), Positives = 90/173 (52%)
Query: 2 LLCTSFDTELVTAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENSPXXXXXXXXXXXXTK 61
++ + TE F+ + G E ++GE R VR+VFR A++ +P +
Sbjct: 584 MIAKALATESKLNFLSIKGPELFSMWVGESERAVREVFRKARQVAPAIVFFDEIDAIGGE 643
Query: 62 RF--DAQTGADREVQRILLELLNQMDGFDQTTNVKVIMATNRADTLDPALLRPGRLDRKI 119
R D + +R+L +LL ++DG + NV ++ ATNR D +D ALLRPGR+DR +
Sbjct: 644 RSEGDGSSSGSSVKERVLTQLLTELDGVEALQNVTIVAATNRPDMIDKALLRPGRIDRIL 703
Query: 120 EFPLPDRRQKRLVFSTITAKMNLSDEVDLEDYVARPDRISGADINAICQEVIM 172
LP +R + M +S++VD+E V + SGA+I A+C E +
Sbjct: 704 YVGLPQCEARREILKIKLRAMPISNDVDMEKLVQLTEGYSGAEIQAVCHEAAL 756
Score = 177 (67.4 bits), Expect = 8.1e-18, Sum P(2) = 8.1e-18
Identities = 36/106 (33%), Positives = 62/106 (58%)
Query: 204 KRLVFSTITAKMNFMLNIGNLQVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLV 263
K V + + +++ + + N+ ++ ATNR D +D ALLRPGR+DR + LP +R +
Sbjct: 657 KERVLTQLLTELDGVEALQNVTIVAATNRPDMIDKALLRPGRIDRILYVGLPQCEARREI 716
Query: 264 FSTITAKMNLSDEVDLEDYVARPDRISGADINAICQEAGMHAVREN 309
M +S++VD+E V + SGA+I A+C EA + A+ ++
Sbjct: 717 LKIKLRAMPISNDVDMEKLVQLTEGYSGAEIQAVCHEAALRALEQS 762
Score = 115 (45.5 bits), Expect = 8.1e-18, Sum P(2) = 8.1e-18
Identities = 42/163 (25%), Positives = 72/163 (44%)
Query: 16 IRVVGSEFVQKYLGEGPRMVRDVFRLAKENSPXXXXXXXXXXXXTKRFDAQTGADREVQR 75
IR+ E K+LGE + + +F A + P + + V
Sbjct: 339 IRINSGEVYSKFLGETEQKLGAIFERAYNHYPHPTLLLIEDVHNLCPKQENSDLVKRVSL 398
Query: 76 ILLELLNQMDGFDQTTNVKV-IMATN-RADTLDPALLRPGRLDRKIEFPLPDRRQK-RLV 132
L LL+Q+ Q K ++AT+ + DTL P++ R GRLD ++E P + + +V
Sbjct: 399 AFLSLLDQLSSPSQLKGSKTFVLATSSQIDTLHPSIRRAGRLDNEVELGAPSSQARLEIV 458
Query: 133 FSTI-TAKMNLSDEVDLEDYVARPDRISGADI-NAICQEVIMA 173
I + + LSDE ++E + GAD+ N + ++ A
Sbjct: 459 RCLIKSVEHQLSDE-EVEHVASITHGYVGADLANLVYAAMLQA 500
Score = 92 (37.4 bits), Expect = 2.1e-08, Sum P(2) = 2.1e-08
Identities = 18/36 (50%), Positives = 24/36 (66%)
Query: 170 VIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKR 205
++ ATNR D +D ALLRPGR+DR + LP +R
Sbjct: 679 IVAATNRPDMIDKALLRPGRIDRILYVGLPQCEARR 714
Score = 75 (31.5 bits), Expect = 1.2e-13, Sum P(2) = 1.2e-13
Identities = 22/74 (29%), Positives = 42/74 (56%)
Query: 134 STITAKMNLSDEVDLEDYVARPDRISGADINAICQEVIMATN-RADTLDPALLRPGRLDR 192
S + +++L+ + L D ++ P ++ G+ + ++AT+ + DTL P++ R GRLD
Sbjct: 390 SDLVKRVSLAF-LSLLDQLSSPSQLKGS------KTFVLATSSQIDTLHPSIRRAGRLDN 442
Query: 193 KIEFPLPDRRQKRL 206
++E P Q RL
Sbjct: 443 EVELGAPSS-QARL 455
>CGD|CAL0004443 [details] [associations]
symbol:orf19.2057 species:5476 "Candida albicans" [GO:0005745
"m-AAA complex" evidence=IEA] [GO:0097002 "mitochondrial inner
boundary membrane" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0008237 "metallopeptidase activity" evidence=IEA]
[GO:0016887 "ATPase activity" evidence=IEA] [GO:0006508
"proteolysis" evidence=IEA] [GO:0006461 "protein complex assembly"
evidence=IEA] [GO:0006465 "signal peptide processing" evidence=IEA]
HAMAP:MF_01458 InterPro:IPR000642 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005936
InterPro:IPR011546 Pfam:PF00004 Pfam:PF01434 Pfam:PF06480
PROSITE:PS00674 SMART:SM00382 CGD:CAL0004443 GO:GO:0016021
GO:GO:0005524 GO:GO:0008270 GO:GO:0006508 GO:GO:0004222
GO:GO:0030163 eggNOG:COG0465 KO:K08956 GO:GO:0017111
TIGRFAMs:TIGR01241 EMBL:AACQ01000031 EMBL:AACQ01000030
MEROPS:M41.003 RefSeq:XP_719505.1 RefSeq:XP_719629.1
ProteinModelPortal:Q5AD10 SMR:Q5AD10 GeneID:3638753 GeneID:3638884
KEGG:cal:CaO19.2057 KEGG:cal:CaO19.9604 Uniprot:Q5AD10
Length = 846
Score = 257 (95.5 bits), Expect = 6.4e-21, P = 6.4e-21
Identities = 63/179 (35%), Positives = 91/179 (50%)
Query: 2 LLCTSFDTELVTAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENSPXXXXXXXXXXXXTK 61
LL + E F V GSEFV+ ++G G VRD+F+ A+EN+P +
Sbjct: 421 LLAKATAGEAGVPFYSVSGSEFVEMFVGVGASRVRDLFKTARENAPSIVFVDEIDAIGKQ 480
Query: 62 RFDAQ-TGADREVQRILLELLNQMDGFDQTTNVKVIMATNRADTLDPALLRPGRLDRKIE 120
R TGA+ E + L +LL +MDGFD + +V V+ TNR D LD AL+RPGR DR +
Sbjct: 481 RSKGNATGANDERETTLNQLLVEMDGFDTSDHVVVLAGTNRPDILDRALMRPGRFDRHVH 540
Query: 121 FPLPDRRQKRLVFSTITAKMNLSDEVDLE---DYVARPDRISGADINAICQEVIMATNR 176
P+ ++ +F K+ L ++D + A SGADI +C E + R
Sbjct: 541 IDNPELLGRKEIFDVHLQKITLQKDIDPDLSGRLAALTPGFSGADIANVCNEAALIAAR 599
Score = 153 (58.9 bits), Expect = 1.2e-07, P = 1.2e-07
Identities = 42/146 (28%), Positives = 70/146 (47%)
Query: 200 DRRQKRLVFSTITAKMNFMLNIGNLQVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQ 259
D R+ L + + +M+ ++ V+ TNR D LD AL+RPGR DR + P+
Sbjct: 491 DERETTL--NQLLVEMDGFDTSDHVVVLAGTNRPDILDRALMRPGRFDRHVHIDNPELLG 548
Query: 260 KRLVFSTITAKMNLSDEVDLE---DYVARPDRISGADINAICQEAGMHAVRENRYIVLPK 316
++ +F K+ L ++D + A SGADI +C EA + A R N V +
Sbjct: 549 RKEIFDVHLQKITLQKDIDPDLSGRLAALTPGFSGADIANVCNEAALIAARYNAEFVTLR 608
Query: 317 DFEKGYKKCAGMHAVRENRYIVLPKD 342
FE ++ G V + ++ P++
Sbjct: 609 HFELAIERVIG--GVEKKSKLLNPEE 632
>TIGR_CMR|GSU_1180 [details] [associations]
symbol:GSU_1180 "cell division protein FtsH"
species:243231 "Geobacter sulfurreducens PCA" [GO:0000910
"cytokinesis" evidence=ISS] [GO:0004222 "metalloendopeptidase
activity" evidence=ISS] [GO:0016887 "ATPase activity" evidence=ISS]
HAMAP:MF_01458 InterPro:IPR000642 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005936
InterPro:IPR011546 Pfam:PF00004 Pfam:PF01434 Pfam:PF06480
PROSITE:PS00674 SMART:SM00382 GO:GO:0016021 GO:GO:0005886
GO:GO:0005524 GO:GO:0051301 GO:GO:0046872 GO:GO:0008270
GO:GO:0006200 GO:GO:0006508 GO:GO:0004222 GO:GO:0016887
EMBL:AE017180 GenomeReviews:AE017180_GR GO:GO:0030163
TIGRFAMs:TIGR01241 HOGENOM:HOG000217276 KO:K03798 MEROPS:M41.001
RefSeq:NP_952233.1 ProteinModelPortal:Q74DY5 SMR:Q74DY5
GeneID:2686793 KEGG:gsu:GSU1180 PATRIC:22025134 OMA:VCQWGMS
ProtClustDB:CLSK828230 BioCyc:GSUL243231:GH27-1166-MONOMER
Uniprot:Q74DY5
Length = 617
Score = 256 (95.2 bits), Expect = 8.9e-21, P = 8.9e-21
Identities = 61/181 (33%), Positives = 91/181 (50%)
Query: 2 LLCTSFDTELVTAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENSPXXXXXXXXXXXXTK 61
LL + E F+ + S+F++ ++G G VRD+F AK+++P
Sbjct: 223 LLARAVAGEADVTFLSISASQFIEMFVGVGAGRVRDLFATAKKSAPSIIFIDELDAVGRS 282
Query: 62 RFDAQTGADREVQRILLELLNQMDGFDQTTNVKVIMATNRADTLDPALLRPGRLDRKIEF 121
R G E ++ L +LL++MDGFD V V+ ATNR D LDPALLRPGR DR +
Sbjct: 283 RGAGLGGGHDEREQTLNQLLSEMDGFDSHDEVIVMAATNRPDVLDPALLRPGRFDRHVVI 342
Query: 122 PLPDRRQKRLVFSTITAKMNLSDEVDLEDYVARPDRISGADINAICQE--VIMATNRADT 179
PD R + + T K+ L +VDL ++GAD+ + E ++ A A T
Sbjct: 343 DRPDWRDREKILHVHTRKIPLDKDVDLAVIARGTPGMAGADLENLVNEAAILAARENAAT 402
Query: 180 L 180
+
Sbjct: 403 V 403
Score = 173 (66.0 bits), Expect = 4.5e-10, P = 4.5e-10
Identities = 43/125 (34%), Positives = 65/125 (52%)
Query: 200 DRRQKRLVFSTITAKMNFMLNIGNLQVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQ 259
D R++ L + + ++M+ + + V+ ATNR D LDPALLRPGR DR + PD R
Sbjct: 292 DEREQTL--NQLLSEMDGFDSHDEVIVMAATNRPDVLDPALLRPGRFDRHVVIDRPDWRD 349
Query: 260 KRLVFSTITAKMNLSDEVDLEDYVARPDRISGADINAICQEAGMHAVRENRYIVLPKDFE 319
+ + T K+ L +VDL ++GAD+ + EA + A REN V + E
Sbjct: 350 REKILHVHTRKIPLDKDVDLAVIARGTPGMAGADLENLVNEAAILAARENAATVTMEHME 409
Query: 320 KGYKK 324
+ K
Sbjct: 410 RAKDK 414
>GENEDB_PFALCIPARUM|PFL1925w [details] [associations]
symbol:PFL1925w "cell division protein FtsH,
putative" species:5833 "Plasmodium falciparum" [GO:0004176
"ATP-dependent peptidase activity" evidence=ISS] HAMAP:MF_01458
InterPro:IPR000642 InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005936 Pfam:PF00004 Pfam:PF01434
PROSITE:PS00674 SMART:SM00382 GO:GO:0005524 GO:GO:0051301
GO:GO:0016020 GO:GO:0006508 GO:GO:0004222 EMBL:AE014188
GO:GO:0030163 TIGRFAMs:TIGR01241 GO:GO:0004176 HOGENOM:HOG000217276
HSSP:Q9LCZ4 KO:K01417 RefSeq:XP_001350791.1
ProteinModelPortal:Q8I526 SMR:Q8I526 IntAct:Q8I526
MINT:MINT-1702870 PRIDE:Q8I526 EnsemblProtists:PFL1925w:mRNA
GeneID:811437 KEGG:pfa:PFL1925w EuPathDB:PlasmoDB:PF3D7_1239700
ProtClustDB:CLSZ2433071 Uniprot:Q8I526
Length = 880
Score = 253 (94.1 bits), Expect = 1.6e-20, Sum P(2) = 1.6e-20
Identities = 68/185 (36%), Positives = 97/185 (52%)
Query: 2 LLCTSFDTELVTAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENSPXXXXXXXXXXXXTK 61
+L + TE +I G EF++ Y+G+G + +R +F A+ +P K
Sbjct: 197 MLARAVATEANVPYIYTSGPEFIEIYVGQGAKRIRQLFAHARSVAPSIVFIDEIDAIGGK 256
Query: 62 RFDAQT-GA-DREVQRILLELLNQMDGFDQTTNVKVIMATNRADTLDPALLRPGRLDRKI 119
R GA RE + L +LL +MDGF T ++ VI ATNR DTLD ALLRPGR DR +
Sbjct: 257 RSSGSVNGAGQREHDQTLNQLLVEMDGFSNTVHIMVIGATNRIDTLDSALLRPGRFDRIV 316
Query: 120 EFPLPDRRQKRLVFSTITAKMNLSDEVDLEDY--VAR-PDRISGADI-NAICQEVIMATN 175
PLPD ++ + K+ SD + LED +AR SGAD+ N + + I+AT
Sbjct: 317 YVPLPDINGRKKILEIYIKKIK-SD-LKLEDIEKIARLTPGFSGADLENVVNEATILATR 374
Query: 176 RADTL 180
+L
Sbjct: 375 NNKSL 379
Score = 166 (63.5 bits), Expect = 7.1e-09, Sum P(2) = 7.1e-09
Identities = 44/116 (37%), Positives = 64/116 (55%)
Query: 201 RRQKRLVFSTITAKMNFMLNIGNLQVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQK 260
+R+ + + +M+ N ++ VI ATNR DTLD ALLRPGR DR + PLPD +
Sbjct: 267 QREHDQTLNQLLVEMDGFSNTVHIMVIGATNRIDTLDSALLRPGRFDRIVYVPLPDINGR 326
Query: 261 RLVFSTITAKMNLSDEVDLEDY--VAR-PDRISGADINAICQEAGMHAVRENRYIV 313
+ + K+ SD + LED +AR SGAD+ + EA + A R N+ +V
Sbjct: 327 KKILEIYIKKIK-SD-LKLEDIEKIARLTPGFSGADLENVVNEATILATRNNKSLV 380
Score = 120 (47.3 bits), Expect = 0.00096, Sum P(2) = 0.00096
Identities = 27/64 (42%), Positives = 37/64 (57%)
Query: 164 NAICQEVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLVFSTITAKMNFMLNIGN 223
N + VI ATNR DTLD ALLRPGR DR + PLPD ++ + K+ L + +
Sbjct: 286 NTVHIMVIGATNRIDTLDSALLRPGRFDRIVYVPLPDINGRKKILEIYIKKIKSDLKLED 345
Query: 224 LQVI 227
++ I
Sbjct: 346 IEKI 349
Score = 42 (19.8 bits), Expect = 1.6e-20, Sum P(2) = 1.6e-20
Identities = 7/13 (53%), Positives = 9/13 (69%)
Query: 344 EKGYKNNTKKDES 356
EKGYKNN + +
Sbjct: 794 EKGYKNNNNNNNN 806
>UNIPROTKB|Q8I526 [details] [associations]
symbol:PFL1925w "Cell division protein FtsH, putative"
species:36329 "Plasmodium falciparum 3D7" [GO:0004176
"ATP-dependent peptidase activity" evidence=ISS] HAMAP:MF_01458
InterPro:IPR000642 InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005936 Pfam:PF00004 Pfam:PF01434
PROSITE:PS00674 SMART:SM00382 GO:GO:0005524 GO:GO:0051301
GO:GO:0016020 GO:GO:0006508 GO:GO:0004222 EMBL:AE014188
GO:GO:0030163 TIGRFAMs:TIGR01241 GO:GO:0004176 HOGENOM:HOG000217276
HSSP:Q9LCZ4 KO:K01417 RefSeq:XP_001350791.1
ProteinModelPortal:Q8I526 SMR:Q8I526 IntAct:Q8I526
MINT:MINT-1702870 PRIDE:Q8I526 EnsemblProtists:PFL1925w:mRNA
GeneID:811437 KEGG:pfa:PFL1925w EuPathDB:PlasmoDB:PF3D7_1239700
ProtClustDB:CLSZ2433071 Uniprot:Q8I526
Length = 880
Score = 253 (94.1 bits), Expect = 1.6e-20, Sum P(2) = 1.6e-20
Identities = 68/185 (36%), Positives = 97/185 (52%)
Query: 2 LLCTSFDTELVTAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENSPXXXXXXXXXXXXTK 61
+L + TE +I G EF++ Y+G+G + +R +F A+ +P K
Sbjct: 197 MLARAVATEANVPYIYTSGPEFIEIYVGQGAKRIRQLFAHARSVAPSIVFIDEIDAIGGK 256
Query: 62 RFDAQT-GA-DREVQRILLELLNQMDGFDQTTNVKVIMATNRADTLDPALLRPGRLDRKI 119
R GA RE + L +LL +MDGF T ++ VI ATNR DTLD ALLRPGR DR +
Sbjct: 257 RSSGSVNGAGQREHDQTLNQLLVEMDGFSNTVHIMVIGATNRIDTLDSALLRPGRFDRIV 316
Query: 120 EFPLPDRRQKRLVFSTITAKMNLSDEVDLEDY--VAR-PDRISGADI-NAICQEVIMATN 175
PLPD ++ + K+ SD + LED +AR SGAD+ N + + I+AT
Sbjct: 317 YVPLPDINGRKKILEIYIKKIK-SD-LKLEDIEKIARLTPGFSGADLENVVNEATILATR 374
Query: 176 RADTL 180
+L
Sbjct: 375 NNKSL 379
Score = 166 (63.5 bits), Expect = 7.1e-09, Sum P(2) = 7.1e-09
Identities = 44/116 (37%), Positives = 64/116 (55%)
Query: 201 RRQKRLVFSTITAKMNFMLNIGNLQVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQK 260
+R+ + + +M+ N ++ VI ATNR DTLD ALLRPGR DR + PLPD +
Sbjct: 267 QREHDQTLNQLLVEMDGFSNTVHIMVIGATNRIDTLDSALLRPGRFDRIVYVPLPDINGR 326
Query: 261 RLVFSTITAKMNLSDEVDLEDY--VAR-PDRISGADINAICQEAGMHAVRENRYIV 313
+ + K+ SD + LED +AR SGAD+ + EA + A R N+ +V
Sbjct: 327 KKILEIYIKKIK-SD-LKLEDIEKIARLTPGFSGADLENVVNEATILATRNNKSLV 380
Score = 120 (47.3 bits), Expect = 0.00096, Sum P(2) = 0.00096
Identities = 27/64 (42%), Positives = 37/64 (57%)
Query: 164 NAICQEVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLVFSTITAKMNFMLNIGN 223
N + VI ATNR DTLD ALLRPGR DR + PLPD ++ + K+ L + +
Sbjct: 286 NTVHIMVIGATNRIDTLDSALLRPGRFDRIVYVPLPDINGRKKILEIYIKKIKSDLKLED 345
Query: 224 LQVI 227
++ I
Sbjct: 346 IEKI 349
Score = 42 (19.8 bits), Expect = 1.6e-20, Sum P(2) = 1.6e-20
Identities = 7/13 (53%), Positives = 9/13 (69%)
Query: 344 EKGYKNNTKKDES 356
EKGYKNN + +
Sbjct: 794 EKGYKNNNNNNNN 806
>TIGR_CMR|CPS_3452 [details] [associations]
symbol:CPS_3452 "ATP-dependent metalloprotease FtsH"
species:167879 "Colwellia psychrerythraea 34H" [GO:0000910
"cytokinesis" evidence=ISS] [GO:0004222 "metalloendopeptidase
activity" evidence=ISS] [GO:0006508 "proteolysis" evidence=ISS]
[GO:0016887 "ATPase activity" evidence=ISS] HAMAP:MF_01458
InterPro:IPR000642 InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005936 InterPro:IPR011546
Pfam:PF00004 Pfam:PF01434 Pfam:PF06480 PROSITE:PS00674
SMART:SM00382 GO:GO:0016021 GO:GO:0005886 GO:GO:0005524
GO:GO:0046872 GO:GO:0008270 GO:GO:0006200 GO:GO:0006508
GO:GO:0004222 GO:GO:0016887 EMBL:CP000083 GenomeReviews:CP000083_GR
GO:GO:0030163 eggNOG:COG0465 HOGENOM:HOG000217277
TIGRFAMs:TIGR01241 KO:K03798 MEROPS:M41.001 OMA:RSIIDQC
RefSeq:YP_270126.1 ProteinModelPortal:Q47YJ4 SMR:Q47YJ4
STRING:Q47YJ4 GeneID:3519317 KEGG:cps:CPS_3452 PATRIC:21469851
BioCyc:CPSY167879:GI48-3480-MONOMER Uniprot:Q47YJ4
Length = 660
Score = 255 (94.8 bits), Expect = 2.6e-20, P = 2.6e-20
Identities = 61/175 (34%), Positives = 86/175 (49%)
Query: 2 LLCTSFDTELVTAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENSPXXXXXXXXXXXXTK 61
LL + E F + GS+FV+ ++G G VRD+F AK+ +P +
Sbjct: 202 LLAKAIAGEAKVPFFTISGSDFVEMFVGVGASRVRDMFEQAKKAAPCIIFIDEIDAVGRQ 261
Query: 62 RFDAQTGADREVQRILLELLNQMDGFDQTTNVKVIMATNRADTLDPALLRPGRLDRKIEF 121
R G E ++ L ++L +MDGF+ V VI ATNR D LDPALLRPGR DR++
Sbjct: 262 RGAGMGGGHDEREQTLNQMLVEMDGFEGNEGVIVIAATNRPDVLDPALLRPGRFDRQVTV 321
Query: 122 PLPDRRQKRLVFSTITAKMNLSDEVDLEDYVARPDRISGADINAICQEVIMATNR 176
LPD R + + K+ L D+V E SGAD+ + E + R
Sbjct: 322 GLPDIRGREQILKVHMRKVPLGDDVKAEVIARGTPGFSGADLANLVNEAALCAAR 376
Score = 180 (68.4 bits), Expect = 8.2e-11, P = 8.2e-11
Identities = 48/126 (38%), Positives = 67/126 (53%)
Query: 200 DRRQKRLVFSTITAKMN-FMLNIGNLQVIMATNRADTLDPALLRPGRLDRKIEFPLPDRR 258
D R++ L + + +M+ F N G + VI ATNR D LDPALLRPGR DR++ LPD R
Sbjct: 271 DEREQTL--NQMLVEMDGFEGNEGVI-VIAATNRPDVLDPALLRPGRFDRQVTVGLPDIR 327
Query: 259 QKRLVFSTITAKMNLSDEVDLEDYVARPDRISGADINAICQEAGMHAVRENRYIVLPKDF 318
+ + K+ L D+V E SGAD+ + EA + A R R +V K+F
Sbjct: 328 GREQILKVHMRKVPLGDDVKAEVIARGTPGFSGADLANLVNEAALCAARTARRVVSMKEF 387
Query: 319 EKGYKK 324
+ K
Sbjct: 388 DAAKDK 393
>CGD|CAL0000102 [details] [associations]
symbol:RIX7 species:5476 "Candida albicans" [GO:0030448
"hyphal growth" evidence=IMP] [GO:0005730 "nucleolus" evidence=IEA]
[GO:0030687 "preribosome, large subunit precursor" evidence=IEA]
[GO:0000055 "ribosomal large subunit export from nucleus"
evidence=IEA] [GO:0042273 "ribosomal large subunit biogenesis"
evidence=IEA] [GO:0044011 "single-species biofilm formation on
inanimate substrate" evidence=IMP] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 CGD:CAL0000102 GO:GO:0005524 eggNOG:COG0464
GO:GO:0017111 GO:GO:0030448 GO:GO:0044011 EMBL:AACQ01000021
EMBL:AACQ01000022 KO:K14571 RefSeq:XP_720530.1 RefSeq:XP_720658.1
ProteinModelPortal:Q5AGG2 STRING:Q5AGG2 GeneID:3637615
GeneID:3637735 KEGG:cal:CaO19.11695 KEGG:cal:CaO19.4219
Uniprot:Q5AGG2
Length = 827
Score = 228 (85.3 bits), Expect = 3.2e-16, P = 3.2e-16
Identities = 60/173 (34%), Positives = 89/173 (51%)
Query: 2 LLCTSFDTELVTAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENSPXXXXXXXXXXXXTK 61
LL + E FI + G E + KY+GE + VR VF+ A+ ++P +
Sbjct: 571 LLAKAVANESRANFISIKGPELLNKYVGESEKAVRQVFQRARASTPCIIFFDELDALVPR 630
Query: 62 RFDAQTGADREVQRILLELLNQMDGFDQTTNVKVIMATNRADTLDPALLRPGRLDRK--I 119
R T R++ LL ++DG + V VI ATNR D +DPA+LRPGRLD+ I
Sbjct: 631 R---DTSMSESSSRVVNTLLTELDGLNDRKGVFVIGATNRPDMIDPAMLRPGRLDKTLYI 687
Query: 120 EFPLPDRRQKRLVFSTITAKMNLSDEVDLEDYVARPDR---ISGADINAICQE 169
E P P+ R + L T+ L VDL + ++R R SGAD++++ +E
Sbjct: 688 ELPTPEERLEILKTLVRTSNSPLHANVDL-NAISRDSRCGNFSGADLSSLVKE 739
Score = 161 (61.7 bits), Expect = 2.6e-20, Sum P(2) = 2.6e-20
Identities = 48/140 (34%), Positives = 70/140 (50%)
Query: 10 ELVTAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENSPXXXXXXXXXXXXTKRFDAQTGA 69
EL FI + V GE + +R++F AK+ +P KR D GA
Sbjct: 250 ELKVPFINISAPSVVSGMSGESEKKLREIFEEAKQIAPCLIFMDEIDAITPKR-DG--GA 306
Query: 70 DREVQ-RILLELLNQMDGF--DQTTN--VKVIMATNRADTLDPALLRPGRLDRKIEFPLP 124
RE++ RI+ +LL MD ++T V VI ATNR D+LD AL R GR DR+I +P
Sbjct: 307 QREMEKRIVAQLLTLMDELTLEKTGGKPVVVIGATNRPDSLDSALRRAGRFDREICLNVP 366
Query: 125 DRRQKRLVFSTITAKMNLSD 144
+ Q+ + +T + L +
Sbjct: 367 NEEQRISILKAMTKNIKLEN 386
Score = 157 (60.3 bits), Expect = 2.6e-20, Sum P(2) = 2.6e-20
Identities = 40/107 (37%), Positives = 66/107 (61%)
Query: 207 VFSTITAKMNFMLNIGNLQVIMATNRADTLDPALLRPGRLDRK--IEFPLPDRRQKRLVF 264
V +T+ +++ + + + VI ATNR D +DPA+LRPGRLD+ IE P P+ R + L
Sbjct: 642 VVNTLLTELDGLNDRKGVFVIGATNRPDMIDPAMLRPGRLDKTLYIELPTPEERLEILKT 701
Query: 265 STITAKMNLSDEVDLEDYVARPDR---ISGADINAICQEAGMHAVRE 308
T+ L VDL + ++R R SGAD++++ +EAG+ A+++
Sbjct: 702 LVRTSNSPLHANVDL-NAISRDSRCGNFSGADLSSLVKEAGVWALKK 747
Score = 119 (46.9 bits), Expect = 0.00068, P = 0.00068
Identities = 42/165 (25%), Positives = 74/165 (44%)
Query: 203 QKRLVFSTITAKMNFMLN-IGNLQVIM--ATNRADTLDPALLRPGRLDRKIEFPLPDRRQ 259
+KR+V +T L G V++ ATNR D+LD AL R GR DR+I +P+ Q
Sbjct: 311 EKRIVAQLLTLMDELTLEKTGGKPVVVIGATNRPDSLDSALRRAGRFDREICLNVPNEEQ 370
Query: 260 KRLVFSTITAKMNLS--DEVDLEDYVARPDRISGADINAICQEAGMHAVRENRYIVLPKD 317
+ + +T + L + + + GAD+ ++ AG+ A++ +
Sbjct: 371 RISILKAMTKNIKLENGEHFNYRELSKLTPGYVGADLKSLVTAAGISAIK--------RI 422
Query: 318 FEKGYKKCAGMHAVRENRYIVLPKDFEKGYKNNTKKDESEHEFYK 362
FE + H+V+++ P + ++ KK E + E K
Sbjct: 423 FETMSELQEESHSVKDDSMDADPVSLDANKEDMIKKFEQKSEAEK 467
Score = 111 (44.1 bits), Expect = 1.6e-15, Sum P(2) = 1.6e-15
Identities = 26/71 (36%), Positives = 37/71 (52%)
Query: 170 VIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLVFSTITAKMNFMLNIG-NLQVIM 228
VI ATNR D +DPA+LRPGRLD+ + LP ++ + T+ N L+ +L I
Sbjct: 661 VIGATNRPDMIDPAMLRPGRLDKTLYIELPTPEERLEILKTLVRTSNSPLHANVDLNAIS 720
Query: 229 ATNRADTLDPA 239
+R A
Sbjct: 721 RDSRCGNFSGA 731
Score = 91 (37.1 bits), Expect = 5.6e-13, Sum P(2) = 5.6e-13
Identities = 20/43 (46%), Positives = 27/43 (62%)
Query: 170 VIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLVFSTIT 212
VI ATNR D+LD AL R GR DR+I +P+ Q+ + +T
Sbjct: 337 VIGATNRPDSLDSALRRAGRFDREICLNVPNEEQRISILKAMT 379
WARNING: HSPs involving 371 database sequences were not reported due to the
limiting value of parameter B = 250.
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.322 0.138 0.395 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 362 350 0.0010 116 3 11 22 0.37 34
34 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 621
No. of states in DFA: 557 (59 KB)
Total size of DFA: 176 KB (2101 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 25.27u 0.11s 25.38t Elapsed: 00:00:01
Total cpu time: 25.34u 0.11s 25.45t Elapsed: 00:00:01
Start: Thu Aug 15 12:56:23 2013 End: Thu Aug 15 12:56:24 2013
WARNINGS ISSUED: 2