BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy6778
(314 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q90922|NET1_CHICK Netrin-1 OS=Gallus gallus GN=NTN1 PE=1 SV=1
Length = 606
Score = 265 bits (677), Expect = 3e-70, Method: Compositional matrix adjust.
Identities = 150/314 (47%), Positives = 195/314 (62%), Gaps = 40/314 (12%)
Query: 26 DPCY-ENGRPRRCIPDFVNAAFGQEVKVNSVCGLESPERYC-------DTSGACHVCDAG 77
DPCY E+G PRRCIPDFVN+AFG+EVKV+S CG + P RYC + +CH+C+A
Sbjct: 41 DPCYDEHGLPRRCIPDFVNSAFGKEVKVSSTCG-KPPSRYCVVTEKGEEQVRSCHLCNAS 99
Query: 78 SPRGRFPAEYLTDLNNPSNVTCWRSEAQTSVNSLSASPDNVTLTLSLGKKFELTYISLSF 137
P+ P +LTDLNNP N+TCW+S+ S P NVTLTLSLGKKFE+TY+SL F
Sbjct: 100 DPKRAHPPSFLTDLNNPHNLTCWQSD------SYVQYPHNVTLTLSLGKKFEVTYVSLQF 153
Query: 138 CPKSIKPDSLAIYKSQDFGKSWQPLQFYSSQCKKLYGRTATGVISRGNEQEALCTDRHKK 197
C S +P+S+AIYKS D+GK+W P QFYS+QC+K+Y + + I++ NEQEA+CTD H
Sbjct: 154 C--SPRPESMAIYKSMDYGKTWVPFQFYSTQCRKMYNKPSRAAITKQNEQEAICTDSHTD 211
Query: 198 ----QGGRCKCNGHASRCI-----KSPQGE--------LVCECRHNTAGKDCEKCKPFFS 240
GG + R SP + V R +T G + E
Sbjct: 212 VRPLSGGLIAFSTLDGRPTAHDFDNSPVLQDWVTATDIKVTFSRLHTFGDENEDDSELAR 271
Query: 241 DRPWGRATVYDANECK-GGRCKCNGHASRCIKSPQGALVCECRHNTAGKDCEKCKPFFSD 299
D + Y ++ + GGRCKCNGHASRC++ LVC+C+HNTAG +C++CKPF D
Sbjct: 272 D-----SYFYAVSDLQVGGRCKCNGHASRCVRDRDDNLVCDCKHNTAGPECDRCKPFHYD 326
Query: 300 RPWGRATVYDANEC 313
RPW RAT +ANEC
Sbjct: 327 RPWQRATAREANEC 340
Score = 34.7 bits (78), Expect = 0.92, Method: Compositional matrix adjust.
Identities = 31/102 (30%), Positives = 40/102 (39%), Gaps = 15/102 (14%)
Query: 202 CKCNGHASRCIKSPQ---------GELVCECRHNTAGKDCEKCKP-FFSDRPWGRATVYD 251
C CN HA RC + + G + CRHNTAG+ C CK F+ D +
Sbjct: 343 CNCNLHARRCRFNMELYKLSGRKSGGVCLNCRHNTAGRHCHYCKEGFYRDL---SKPISH 399
Query: 252 ANECKGGRCKCNGHASRCIKSPQGALVCECRHNTAGKDCEKC 293
CK C G A + G C C+ G C +C
Sbjct: 400 RKACKECDCHPVGAAGQTCNQTTGQ--CPCKDGVTGITCNRC 439
>sp|Q2HXW4|NET1_PIG Netrin-1 OS=Sus scrofa GN=NTN1 PE=2 SV=1
Length = 600
Score = 265 bits (676), Expect = 4e-70, Method: Compositional matrix adjust.
Identities = 157/341 (46%), Positives = 200/341 (58%), Gaps = 47/341 (13%)
Query: 6 LLCVPLLIGAVCG-------EKIDLNSDPCY-ENGRPRRCIPDFVNAAFGQEVKVNSVCG 57
L V L+GAV G DPC ENG PRRCIPDFVNAAFG++V+V+S CG
Sbjct: 12 LAAVSCLVGAVRGGPGLSMFAGQAAQPDPCSDENGHPRRCIPDFVNAAFGKDVRVSSTCG 71
Query: 58 LESPERYCDTSG-------ACHVCDAGSPRGRFPAEYLTDLNNPSNVTCWRSEAQTSVNS 110
P RYC S +CH+C+A P+ P +LTDLNNP N+TCW+SE
Sbjct: 72 -RPPARYCVVSERGEERLRSCHLCNASDPKKAHPPAFLTDLNNPHNLTCWQSENYLQF-- 128
Query: 111 LSASPDNVTLTLSLGKKFELTYISLSFCPKSIKPDSLAIYKSQDFGKSWQPLQFYSSQCK 170
P NVTLTLSLGKKFE+TY+SL FC S +P+S+AIYKS D+G++W P QFYS+QC+
Sbjct: 129 ----PHNVTLTLSLGKKFEVTYVSLQFC--SPRPESMAIYKSMDYGRTWVPFQFYSTQCR 182
Query: 171 KLYGRTATGVISRGNEQEALCTDRHKKQ----GGRCKCNGHASR-----CIKSPQGE--- 218
K+Y R I++ NEQEA+CTD H GG + R SP +
Sbjct: 183 KMYNRPHRAPITKQNEQEAVCTDSHTDMRPLSGGLIAFSTLDGRPSAHDFDNSPVLQDWV 242
Query: 219 -----LVCECRHNTAGKDCEKCKPFFSDRPWGRATVYDANECK-GGRCKCNGHASRCIKS 272
V R +T G + E D + Y ++ + GGRCKCNGHA+RC++
Sbjct: 243 TATDIRVAFSRLHTFGDENEDDSELARD-----SYFYAVSDLQVGGRCKCNGHAARCVRD 297
Query: 273 PQGALVCECRHNTAGKDCEKCKPFFSDRPWGRATVYDANEC 313
+LVC+CRHNTAG +C++CKPF DRPW RAT +ANEC
Sbjct: 298 RDDSLVCDCRHNTAGPECDRCKPFHYDRPWQRATAREANEC 338
Score = 37.0 bits (84), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 34/112 (30%), Positives = 45/112 (40%), Gaps = 15/112 (13%)
Query: 192 TDRHKKQGGRCKCNGHASRCIKSPQ---------GELVCECRHNTAGKDCEKCKP-FFSD 241
T R + C CN HA RC + + G + CRHNTAG+ C CK +F D
Sbjct: 331 TAREANECVACNCNLHARRCRFNMELYKLSGRKSGGVCLNCRHNTAGRHCHYCKEGYFRD 390
Query: 242 RPWGRATVYDANECKGGRCKCNGHASRCIKSPQGALVCECRHNTAGKDCEKC 293
G+ + CK C G A + G C C+ G C +C
Sbjct: 391 --LGKPITH-RKACKACDCHPVGAAGKTCNQTTGQ--CPCKDGVTGVTCNRC 437
>sp|O95631|NET1_HUMAN Netrin-1 OS=Homo sapiens GN=NTN1 PE=1 SV=2
Length = 604
Score = 263 bits (672), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 150/314 (47%), Positives = 192/314 (61%), Gaps = 40/314 (12%)
Query: 26 DPCY-ENGRPRRCIPDFVNAAFGQEVKVNSVCGLESPERYCDTSG-------ACHVCDAG 77
DPC ENG PRRCIPDFVNAAFG++V+V+S CG P RYC S +CH+C+A
Sbjct: 39 DPCSDENGHPRRCIPDFVNAAFGKDVRVSSTCG-RPPARYCVVSERGEERLRSCHLCNAS 97
Query: 78 SPRGRFPAEYLTDLNNPSNVTCWRSEAQTSVNSLSASPDNVTLTLSLGKKFELTYISLSF 137
P+ P +LTDLNNP N+TCW+SE P NVTLTLSLGKKFE+TY+SL F
Sbjct: 98 DPKKAHPPAFLTDLNNPHNLTCWQSENYLQF------PHNVTLTLSLGKKFEVTYVSLQF 151
Query: 138 CPKSIKPDSLAIYKSQDFGKSWQPLQFYSSQCKKLYGRTATGVISRGNEQEALCTDRHKK 197
C S +P+S+AIYKS D+G++W P QFYS+QC+K+Y R I++ NEQEA+CTD H
Sbjct: 152 C--SPRPESMAIYKSMDYGRTWVPFQFYSTQCRKMYNRPHRAPITKQNEQEAVCTDSHTD 209
Query: 198 Q----GGRCKCNGHASR-----CIKSPQGE--------LVCECRHNTAGKDCEKCKPFFS 240
GG + R SP + V R +T G + E
Sbjct: 210 MRPLSGGLIAFSTLDGRPSAHDFDNSPVLQDWVTATDIRVAFSRLHTFGDENEDDSELAR 269
Query: 241 DRPWGRATVYDANECK-GGRCKCNGHASRCIKSPQGALVCECRHNTAGKDCEKCKPFFSD 299
D + Y ++ + GGRCKCNGHA+RC++ +LVC+CRHNTAG +C++CKPF D
Sbjct: 270 D-----SYFYAVSDLQVGGRCKCNGHAARCVRDRDDSLVCDCRHNTAGPECDRCKPFHYD 324
Query: 300 RPWGRATVYDANEC 313
RPW RAT +ANEC
Sbjct: 325 RPWQRATAREANEC 338
Score = 36.6 bits (83), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 31/101 (30%), Positives = 41/101 (40%), Gaps = 13/101 (12%)
Query: 202 CKCNGHASRCIKSPQ---------GELVCECRHNTAGKDCEKCKPFFSDRPWGRATVYDA 252
C CN HA RC + + G + CRHNTAG+ C CK + R G+ +
Sbjct: 341 CNCNLHARRCRFNMELYKLSGRKSGGVCLNCRHNTAGRHCHYCKEGYY-RDMGKPITH-R 398
Query: 253 NECKGGRCKCNGHASRCIKSPQGALVCECRHNTAGKDCEKC 293
CK C G A + G C C+ G C +C
Sbjct: 399 KACKACDCHPVGAAGKTCNQTTGQ--CPCKDGVTGITCNRC 437
>sp|O09118|NET1_MOUSE Netrin-1 OS=Mus musculus GN=Ntn1 PE=1 SV=3
Length = 604
Score = 262 bits (670), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 151/315 (47%), Positives = 192/315 (60%), Gaps = 42/315 (13%)
Query: 26 DPCY-ENGRPRRCIPDFVNAAFGQEVKVNSVCGLESPERYCDTSG-------ACHVCDAG 77
DPC ENG PRRCIPDFVNAAFG++V+V+S CG P RYC S +CH+C++
Sbjct: 39 DPCSDENGHPRRCIPDFVNAAFGKDVRVSSTCG-RPPARYCVVSERGEERLRSCHLCNSS 97
Query: 78 SPRGRFPAEYLTDLNNPSNVTCWRSEAQTSVNSLSASPDNVTLTLSLGKKFELTYISLSF 137
P+ P +LTDLNNP N+TCW+SE P NVTLTLSLGKKFE+TY+SL F
Sbjct: 98 DPKKAHPPAFLTDLNNPHNLTCWQSENYLQF------PHNVTLTLSLGKKFEVTYVSLQF 151
Query: 138 CPKSIKPDSLAIYKSQDFGKSWQPLQFYSSQCKKLYGRTATGVISRGNEQEALCTDRHKK 197
C S +P+S+AIYKS D+G++W P QFYS+QC+K+Y R I++ NEQEA+CTD H
Sbjct: 152 C--SPRPESMAIYKSMDYGRTWVPFQFYSTQCRKMYNRPHRAPITKQNEQEAVCTDSHTD 209
Query: 198 Q----GGRCKCNGHASR-----CIKSPQGE--------LVCECRHNTAGKDCEKCKPFFS 240
GG + R SP + V R +T G + E
Sbjct: 210 MRPLSGGLIAFSTLDGRPSAHDFDNSPVLQDWVTATDIRVAFSRLHTFGDENE------D 263
Query: 241 DRPWGRATVYDA--NECKGGRCKCNGHASRCIKSPQGALVCECRHNTAGKDCEKCKPFFS 298
D R + Y A + GGRCKCNGHA+RC++ +LVC+CRHNTAG +C++CKPF
Sbjct: 264 DSELARDSYYYAVSDLQVGGRCKCNGHAARCVRDRDDSLVCDCRHNTAGPECDRCKPFHY 323
Query: 299 DRPWGRATVYDANEC 313
DRPW RAT +ANEC
Sbjct: 324 DRPWQRATAREANEC 338
Score = 37.7 bits (86), Expect = 0.098, Method: Compositional matrix adjust.
Identities = 32/101 (31%), Positives = 41/101 (40%), Gaps = 13/101 (12%)
Query: 202 CKCNGHASRCIKSPQ---------GELVCECRHNTAGKDCEKCKPFFSDRPWGRATVYDA 252
C CN HA RC + + G + CRHNTAG+ C CK F R G+ +
Sbjct: 341 CNCNLHARRCRFNMELYKLSGRKSGGVCLNCRHNTAGRHCHYCKEGFY-RDMGKPITH-R 398
Query: 253 NECKGGRCKCNGHASRCIKSPQGALVCECRHNTAGKDCEKC 293
CK C G A + G C C+ G C +C
Sbjct: 399 KACKACDCHPVGAAGKTCNQTTGQ--CPCKDGVTGITCNRC 437
>sp|Q924Z9|NET1_RAT Netrin-1 OS=Rattus norvegicus GN=Ntn1 PE=1 SV=1
Length = 604
Score = 262 bits (670), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 151/315 (47%), Positives = 192/315 (60%), Gaps = 42/315 (13%)
Query: 26 DPCY-ENGRPRRCIPDFVNAAFGQEVKVNSVCGLESPERYCDTSG-------ACHVCDAG 77
DPC ENG PRRCIPDFVNAAFG++V+V+S CG P RYC S +CH+C++
Sbjct: 39 DPCSDENGHPRRCIPDFVNAAFGKDVRVSSTCG-RPPARYCVVSERGEERLRSCHLCNSS 97
Query: 78 SPRGRFPAEYLTDLNNPSNVTCWRSEAQTSVNSLSASPDNVTLTLSLGKKFELTYISLSF 137
P+ P +LTDLNNP N+TCW+SE P NVTLTLSLGKKFE+TY+SL F
Sbjct: 98 DPKKAHPPAFLTDLNNPHNLTCWQSENYLQF------PHNVTLTLSLGKKFEVTYVSLQF 151
Query: 138 CPKSIKPDSLAIYKSQDFGKSWQPLQFYSSQCKKLYGRTATGVISRGNEQEALCTDRHKK 197
C S +P+S+AIYKS D+G++W P QFYS+QC+K+Y R I++ NEQEA+CTD H
Sbjct: 152 C--SPRPESMAIYKSMDYGRTWVPFQFYSTQCRKMYNRPHRAPITKQNEQEAVCTDSHTD 209
Query: 198 Q----GGRCKCNGHASR-----CIKSPQGE--------LVCECRHNTAGKDCEKCKPFFS 240
GG + R SP + V R +T G + E
Sbjct: 210 MRPLSGGLIAFSTLDGRPSAHDFDNSPVLQDWVTATDIRVAFSRLHTFGDENE------D 263
Query: 241 DRPWGRATVYDA--NECKGGRCKCNGHASRCIKSPQGALVCECRHNTAGKDCEKCKPFFS 298
D R + Y A + GGRCKCNGHA+RC++ +LVC+CRHNTAG +C++CKPF
Sbjct: 264 DSELARDSYYYAVSDLQVGGRCKCNGHAARCVRDRDDSLVCDCRHNTAGPECDRCKPFHY 323
Query: 299 DRPWGRATVYDANEC 313
DRPW RAT +ANEC
Sbjct: 324 DRPWQRATAREANEC 338
Score = 38.1 bits (87), Expect = 0.097, Method: Compositional matrix adjust.
Identities = 32/101 (31%), Positives = 41/101 (40%), Gaps = 13/101 (12%)
Query: 202 CKCNGHASRCIKSPQ---------GELVCECRHNTAGKDCEKCKPFFSDRPWGRATVYDA 252
C CN HA RC + + G + CRHNTAG+ C CK F R G+ +
Sbjct: 341 CNCNLHARRCRFNMELYKLSGRKSGGVCLNCRHNTAGRHCHYCKEGFY-RDMGKPITH-R 398
Query: 253 NECKGGRCKCNGHASRCIKSPQGALVCECRHNTAGKDCEKC 293
CK C G A + G C C+ G C +C
Sbjct: 399 KACKACDCHPVGAAGKTCNQTTGQ--CPCKDGVTGITCNRC 437
>sp|Q90923|NET3_CHICK Netrin-3 (Fragment) OS=Gallus gallus GN=NTN3 PE=2 SV=1
Length = 581
Score = 245 bits (626), Expect = 3e-64, Method: Compositional matrix adjust.
Identities = 141/307 (45%), Positives = 181/307 (58%), Gaps = 37/307 (12%)
Query: 26 DPCY-ENGRPRRCIPDFVNAAFGQEVKVNSVCGLESPERYCDTSGACHVCDAGSPRGRFP 84
DPCY E+G PRRCIP+FVNAAFG+EV+ +S CG + P R+CD A PR P
Sbjct: 27 DPCYDESGAPRRCIPEFVNAAFGKEVQASSTCG-KPPTRHCD---------ASDPRRAHP 76
Query: 85 AEYLTDLNNPSNVTCWRSEAQTSVNSLSASPDNVTLTLSLGKKFELTYISLSFCPKSIKP 144
YLTDLN +N+TCWRSE +L P NVTLTLSLGKKFE+ Y+SL FC S +P
Sbjct: 77 PAYLTDLNTAANMTCWRSE------TLHHLPHNVTLTLSLGKKFEVVYVSLQFC--SPRP 128
Query: 145 DSLAIYKSQDFGKSWQPLQFYSSQCKKLYGRTATGVISRGNEQEALC----TDRHKKQGG 200
+S AI+KS D+GK+W P Q+YSSQC+K+YG+ + +++ NEQEALC TD + GG
Sbjct: 129 ESTAIFKSMDYGKTWVPYQYYSSQCRKIYGKPSKATVTKQNEQEALCTDGLTDLYPLTGG 188
Query: 201 RCKCNGHASR-CIKSPQGELVCECRHNTAGKDCEKCKPFFSDRPWGRAT----------- 248
+ R + V + +P GR
Sbjct: 189 LIAFSTLDGRPSAQDFDSSPVLQDWVTATDIRVVFSRPHLFRELGGREAGEEDGGAGATP 248
Query: 249 -VYDANECK-GGRCKCNGHASRCIKSPQGALVCECRHNTAGKDCEKCKPFFSDRPWGRAT 306
Y E + GGRCKCNGHASRC+K + LVC+C+HNT G +C++CKPF DRPW RA+
Sbjct: 249 YYYSVGELQVGGRCKCNGHASRCVKDKEQKLVCDCKHNTEGPECDRCKPFHYDRPWQRAS 308
Query: 307 VYDANEC 313
+ANEC
Sbjct: 309 AREANEC 315
Score = 113 bits (282), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 56/108 (51%), Positives = 70/108 (64%), Gaps = 11/108 (10%)
Query: 199 GGRCKCNGHASRCIKSPQGELVCECRHNTAGKDCEKCKPFFSDRPWGRATVYDANECKGG 258
GGRCKCNGHASRC+K + +LVC+C+HNT G +C++CKPF DRPW RA+ +ANEC
Sbjct: 259 GGRCKCNGHASRCVKDKEQKLVCDCKHNTEGPECDRCKPFHYDRPWQRASAREANECLA- 317
Query: 259 RCKCNGHASRCIKSPQ---------GALVCECRHNTAGKDCEKCKPFF 297
C CN HA RC + + G + CRHNTAG+ C CK F
Sbjct: 318 -CNCNLHARRCRFNMELYKLSGRKSGGVCLNCRHNTAGRHCHYCKEGF 364
Score = 41.2 bits (95), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 33/106 (31%), Positives = 43/106 (40%), Gaps = 15/106 (14%)
Query: 202 CKCNGHASRCIKSPQ---------GELVCECRHNTAGKDCEKCKP-FFSDRPWGRATVYD 251
C CN HA RC + + G + CRHNTAG+ C CK F+ D ++ D
Sbjct: 318 CNCNLHARRCRFNMELYKLSGRKSGGVCLNCRHNTAGRHCHYCKEGFYRDL---SKSITD 374
Query: 252 ANECKGGRCKCNGHASRCIKSPQGALVCECRHNTAGKDCEKCKPFF 297
CK C G A + G C C+ G C +C F
Sbjct: 375 RKACKACDCHPVGAAGKTCNQTTGQ--CPCKDGVTGLTCNRCAKGF 418
>sp|P34710|UNC6_CAEEL Netrin unc-6 OS=Caenorhabditis elegans GN=unc-6 PE=1 SV=1
Length = 612
Score = 235 bits (599), Expect = 3e-61, Method: Compositional matrix adjust.
Identities = 136/321 (42%), Positives = 178/321 (55%), Gaps = 40/321 (12%)
Query: 24 NSDPCYEN-GRPRRCIPDFVNAAFGQEVKVNSVCGLESPERYCDTSGA--------CHVC 74
+ DPC+++ GRP RC+P+F+NAAFG+ V + CG P++YC C C
Sbjct: 33 DHDPCHDHTGRPVRCVPEFINAAFGKPVIASDTCGTNRPDKYCTVKEGPDGIIREQCDTC 92
Query: 75 DAGSPRGRFPAEYLTDLNNPSNVTCWRSEAQTSVNSLSASPDNVTLTLSLGKKFELTYIS 134
DA + PA LTDLN+ N+TCW V++ S SP NV+LTLSLGKKFELTY+S
Sbjct: 93 DARNHFQSHPASLLTDLNSIGNMTCW-------VSTPSLSPQNVSLTLSLGKKFELTYVS 145
Query: 135 LSFCPKSIKPDSLAIYKSQDFGKSWQPLQFYSSQCKKLYGRTATGVISRGNEQEALCTDR 194
+ FC + PDS+A+YKS DFGK+W P QFYSS+C++++GR I++ NEQEA+CT
Sbjct: 146 MHFCSR--LPDSMALYKSADFGKTWTPFQFYSSECRRIFGRDPDVSITKSNEQEAVCTAS 203
Query: 195 HKKQGGRCKC------------NGHASRCIKSPQGELVCECRHNTAGKDCEKCKPFFSD- 241
H G + N S ++ + + D + +D
Sbjct: 204 HIMGPGGNRVAFPFLENRPSAQNFENSPVLQDWVTATDIKVVFSRLSPDQAELYGLSNDV 263
Query: 242 RPWGRAT--------VYDANECK-GGRCKCNGHASRCIKSPQGALVCECRHNTAGKDCEK 292
+G T Y E GGRCKCNGHASRCI G C+C+HNTAG +CE
Sbjct: 264 NSYGNETDDEVKQRYFYSMGELAVGGRCKCNGHASRCIFDKMGRYTCDCKHNTAGTECEM 323
Query: 293 CKPFFSDRPWGRATVYDANEC 313
CKPF DRPWGRAT AN C
Sbjct: 324 CKPFHYDRPWGRATANSANSC 344
Score = 38.9 bits (89), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 33/101 (32%), Positives = 41/101 (40%), Gaps = 13/101 (12%)
Query: 202 CKCNGHASRCIKSPQ---------GELVCECRHNTAGKDCEKCKPFFSDRPWGRATVYDA 252
C CN HA RC + G + CRHNTAG++C CKP F T A
Sbjct: 347 CNCNQHAKRCRFDAELFRLSGNRSGGVCLNCRHNTAGRNCHLCKPGFVRDTSLPMTHRKA 406
Query: 253 NECKGGRCKCNGHASRCIKSPQGALVCECRHNTAGKDCEKC 293
CK C C+ S Q + C C+ G C +C
Sbjct: 407 --CKS--CGCHPVGSLGKSCNQSSGQCVCKPGVTGTTCNRC 443
>sp|Q24568|NETB_DROME Netrin-B OS=Drosophila melanogaster GN=NetB PE=1 SV=1
Length = 793
Score = 213 bits (541), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 107/183 (58%), Positives = 131/183 (71%), Gaps = 10/183 (5%)
Query: 24 NSDPCYENGRPRRCIPDFVNAAFGQEVKVNSVCGLESPERYCD-----TSGACHVCDAGS 78
++DPCY G+PR+C+P FVNAA+G V+ +SVCG + PERYC+ +G C C+
Sbjct: 30 SNDPCYFEGKPRKCLPSFVNAAYGNPVQASSVCGAQQPERYCELLRDGNAGECRSCE--- 86
Query: 79 PRGRFPAEYLTDLNNPSNVTCWRSEA-QTSVNSLSASPDNVTLTLSLGKKFELTYISLSF 137
+ R+ LTDLNNPSNVTCWRS A + SA PDNVTLTLSLGKK+ELTYISLSF
Sbjct: 87 -QQRYGPAALTDLNNPSNVTCWRSGAVNVPHDPDSAPPDNVTLTLSLGKKYELTYISLSF 145
Query: 138 CPKSIKPDSLAIYKSQDFGKSWQPLQFYSSQCKKLYGRTATGVISRGNEQEALCTDRHKK 197
CP+S +PDSLAI+KS DFG++WQP QFYSSQC+K YGR IS+ NEQEA C +
Sbjct: 146 CPRSPRPDSLAIFKSSDFGQTWQPFQFYSSQCQKFYGRPDRAKISKFNEQEARCINSQHD 205
Query: 198 QGG 200
GG
Sbjct: 206 TGG 208
Score = 95.1 bits (235), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 55/142 (38%), Positives = 70/142 (49%), Gaps = 48/142 (33%)
Query: 199 GGRCKCNGHASRCIK-------------------------------------SPQGELVC 221
GGRCKCNGHAS C+ S + + C
Sbjct: 402 GGRCKCNGHASECVATVSSGSGTALSDQDDGQDEDTPSAPSLANHFGRSTQMSAKLTMTC 461
Query: 222 ECRHNTAGKDCEKCKPFFSDRPWGRATVYDANECKGGRCKCNGHASRCIKSPQ------- 274
C+HNTAG +CE+CKPF+ DRPWGRAT DANECK C+CNGHA RC + +
Sbjct: 462 ACKHNTAGPECERCKPFYFDRPWGRATDNDANECK--MCQCNGHARRCRFNLELYKLSGR 519
Query: 275 --GALVCECRHNTAGKDCEKCK 294
G + C+H+T G+ C C+
Sbjct: 520 VSGGVCYNCQHDTTGRYCHYCR 541
Score = 31.2 bits (69), Expect = 9.9, Method: Compositional matrix adjust.
Identities = 31/114 (27%), Positives = 47/114 (41%), Gaps = 19/114 (16%)
Query: 192 TDRHKKQGGRCKCNGHASRCIKSPQ---------GELVCECRHNTAGKDCEKCKP-FFSD 241
TD + C+CNGHA RC + + G + C+H+T G+ C C+ ++ D
Sbjct: 488 TDNDANECKMCQCNGHARRCRFNLELYKLSGRVSGGVCYNCQHDTTGRYCHYCREGYYRD 547
Query: 242 --RPWGRATVYDANECKGGRCKCNGHASRCIKSPQGALVCECRHNTAGKDCEKC 293
+P V CK RC C+ S + C C+ G C +C
Sbjct: 548 ATKPPNHRKV-----CK--RCDCHPVGSTGKTCNHLSGQCPCKEGVTGLTCNRC 594
>sp|A0JP86|LAMC1_XENTR Laminin subunit gamma-1 OS=Xenopus tropicalis GN=lamc1 PE=2 SV=1
Length = 1592
Score = 201 bits (510), Expect = 7e-51, Method: Compositional matrix adjust.
Identities = 123/313 (39%), Positives = 163/313 (52%), Gaps = 37/313 (11%)
Query: 26 DPCYENGRPRRCIPDFVNAAFGQEVKVNSVCGLESPERYCDTSG------ACHVCDAGSP 79
D CYE G P+RC+P+FVNAAF V + CG PE YC +G +CH+CD+G
Sbjct: 22 DECYEEGSPQRCMPEFVNAAFNATVVATNTCGT-PPEEYCVQTGVTGVTKSCHICDSGQF 80
Query: 80 RGRFPAEYLTDLNNPSNVTCWRSEAQTSVNSLSASPDNVTLTLSLGKKFELTYISLSFCP 139
+ AEYLTD NN + +T W+S QT + + P + LTL LGK F++TY+ L F
Sbjct: 81 HLQHGAEYLTDYNNQAEITWWQS--QTMLAGIQY-PSTINLTLHLGKAFDITYVRLKF-- 135
Query: 140 KSIKPDSLAIYKSQDFGKSWQPLQFYSSQCKKLYGRTATGVISRG-NEQEALCTDRHKKQ 198
+ +P+S A+YK W P Q+YS C+K Y + G I G +EQ+ALCTD
Sbjct: 136 HTSRPESFALYKRTHEDGPWIPYQYYSGSCEKTYQKFNRGFIRTGEDEQQALCTDEFSDI 195
Query: 199 GGRCKCNGHASRCIKSPQGE-----------------LVCECRHNTAGKDCEKCKPFFSD 241
N S P V R NT G + FSD
Sbjct: 196 SPLTGGNVAFSTLEGRPSAYNFDNSPVLQEWVTATDIRVTLNRLNTFGDE------VFSD 249
Query: 242 RPWGRATVYDANE-CKGGRCKCNGHASRCIKSPQGALVCECRHNTAGKDCEKCKPFFSDR 300
++ Y ++ GGRCKCNGHAS C+++ +VC C+HNT G DCEKC PF++DR
Sbjct: 250 PKVLKSYYYAISDFAVGGRCKCNGHASECVRNEFEKIVCNCKHNTFGSDCEKCLPFYNDR 309
Query: 301 PWGRATVYDANEC 313
PW R+T NEC
Sbjct: 310 PWRRSTADSPNEC 322
Score = 99.8 bits (247), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 49/106 (46%), Positives = 64/106 (60%), Gaps = 9/106 (8%)
Query: 199 GGRCKCNGHASRCIKSPQGELVCECRHNTAGKDCEKCKPFFSDRPWGRATVYDANECKGG 258
GGRCKCNGHAS C+++ ++VC C+HNT G DCEKC PF++DRPW R+T NEC
Sbjct: 266 GGRCKCNGHASECVRNEFEKIVCNCKHNTFGSDCEKCLPFYNDRPWRRSTADSPNECLP- 324
Query: 259 RCKCNGHASRCIKSPQ-------GALVCECRHNTAGKDCEKCKPFF 297
C CNG + C P+ G C NT G +CE+C+ +
Sbjct: 325 -CNCNGRSQECYFDPELYRSTGHGGHCTGCADNTDGPNCERCRENY 369
Score = 51.2 bits (121), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 37/103 (35%), Positives = 52/103 (50%), Gaps = 10/103 (9%)
Query: 202 CKCNGHASRCIKSPQGELVCECRHNTAGKDCEKCKPFFSDRPWGRATVYDANECKGGRCK 261
C CNGH+ C P+ VC+C+HNTAG CE+C + +G +T A++C+ C
Sbjct: 707 CTCNGHSDTC--DPESG-VCDCQHNTAGPHCERCSEGY----YGDSTTGSASDCQP--CP 757
Query: 262 CNGHASRCIKSPQGALVC-ECRHNTAGKDCEKCKPFFSDRPWG 303
C G +S + +VC C T GK CE C + P G
Sbjct: 758 CPGGSSCAVVPRTKEVVCTNCPLGTTGKRCELCDDGYFGDPLG 800
Score = 45.8 bits (107), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 31/100 (31%), Positives = 48/100 (48%), Gaps = 22/100 (22%)
Query: 220 VCECRHNTAGKDCEKCKPFF-----SDRPWGRATVYDANECKGGRCKCNGHASRCIKSPQ 274
+C C G+ CE+C P + S P+ + C CNGH+ C P+
Sbjct: 672 ICSCPTGYIGQFCERCAPGYRRENPSQGPYSPCVL----------CTCNGHSDTC--DPE 719
Query: 275 GALVCECRHNTAGKDCEKCKPFFSDRPWGRATVYDANECK 314
VC+C+HNTAG CE+C + +G +T A++C+
Sbjct: 720 SG-VCDCQHNTAGPHCERCSEGY----YGDSTTGSASDCQ 754
Score = 33.1 bits (74), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 22/75 (29%), Positives = 34/75 (45%), Gaps = 9/75 (12%)
Query: 221 CECRHNTAGKDCEKCKPFFSDRPWGRATVYDANECKGGRCKCNGHASRCIKSPQGALVCE 280
CEC + +DC C+P F + GR C+ RC C+ S + CE
Sbjct: 888 CECLPHVTERDCSACEPGFYNLLSGRG-------CE--RCDCHSLGSTSGQCDVRTGQCE 938
Query: 281 CRHNTAGKDCEKCKP 295
C +G+ C++C+P
Sbjct: 939 CHPGISGQQCQQCEP 953
Score = 32.0 bits (71), Expect = 6.5, Method: Compositional matrix adjust.
Identities = 23/80 (28%), Positives = 36/80 (45%), Gaps = 17/80 (21%)
Query: 221 CECRHNTAGKDCEKCKPFFSDRPWGRATVYDANECKGGRCKCN--GHASRC-IKSPQGAL 277
C C+ G+ C++C+P F + E C CN G C +++ +
Sbjct: 399 CSCKPGVMGEKCDRCQPGF----------HSLTEAGCRPCACNPAGSTDECNVETGR--- 445
Query: 278 VCECRHNTAGKDCEKCKPFF 297
C C+ N G +CE+CKP F
Sbjct: 446 -CSCKDNVEGFNCERCKPGF 464
>sp|P11047|LAMC1_HUMAN Laminin subunit gamma-1 OS=Homo sapiens GN=LAMC1 PE=1 SV=3
Length = 1609
Score = 199 bits (506), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 124/309 (40%), Positives = 163/309 (52%), Gaps = 37/309 (11%)
Query: 30 ENGRPRRCIPDFVNAAFGQEVKVNSVCGLESPERYCDTSG------ACHVCDAGSPRGRF 83
E GRP+RC+P+FVNAAF V + CG PE YC +G +CH+CDAG P +
Sbjct: 43 EGGRPQRCMPEFVNAAFNVTVVATNTCGT-PPEEYCVQTGVTGVTKSCHLCDAGQPHLQH 101
Query: 84 PAEYLTDLNNPSNVTCWRSEAQTSVNSLSASPDNVTLTLSLGKKFELTYISLSFCPKSIK 143
A +LTD NN ++ T W+S QT + + P ++ LTL LGK F++TY+ L F + +
Sbjct: 102 GAAFLTDYNNQADTTWWQS--QTMLAGVQY-PSSINLTLHLGKAFDITYVRLKF--HTSR 156
Query: 144 PDSLAIYKSQDFGKSWQPLQFYSSQCKKLYGRTATGVI-SRGNEQEALCTDRHKKQGGRC 202
P+S AIYK W P Q+YS C+ Y + G I + G+EQ+ALCTD
Sbjct: 157 PESFAIYKRTREDGPWIPYQYYSGSCENTYSKANRGFIRTGGDEQQALCTDEFSDISPLT 216
Query: 203 KCNGHASRCIKSPQGE-----------------LVCECRHNTAGKDCEKCKPFFSDRPWG 245
N S P V R NT G + F+D
Sbjct: 217 GGNVAFSTLEGRPSAYNFDNSPVLQEWVTATDIRVTLNRLNTFGDE------VFNDPKVL 270
Query: 246 RATVYDANE-CKGGRCKCNGHASRCIKSPQGALVCECRHNTAGKDCEKCKPFFSDRPWGR 304
++ Y ++ GGRCKCNGHAS C+K+ LVC C+HNT G DCEKC PFF+DRPW R
Sbjct: 271 KSYYYAISDFAVGGRCKCNGHASECMKNEFDKLVCNCKHNTYGVDCEKCLPFFNDRPWRR 330
Query: 305 ATVYDANEC 313
AT A+EC
Sbjct: 331 ATAESASEC 339
Score = 105 bits (263), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 54/106 (50%), Positives = 65/106 (61%), Gaps = 9/106 (8%)
Query: 199 GGRCKCNGHASRCIKSPQGELVCECRHNTAGKDCEKCKPFFSDRPWGRATVYDANECKGG 258
GGRCKCNGHAS C+K+ +LVC C+HNT G DCEKC PFF+DRPW RAT A+EC
Sbjct: 283 GGRCKCNGHASECMKNEFDKLVCNCKHNTYGVDCEKCLPFFNDRPWRRATAESASECLP- 341
Query: 259 RCKCNGHASRCIKSPQ-------GALVCECRHNTAGKDCEKCKPFF 297
C CNG + C P+ G C+ NT G CE+C+ F
Sbjct: 342 -CDCNGRSQECYFDPELYRSTGHGGHCTNCQDNTDGAHCERCRENF 386
Score = 52.0 bits (123), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 40/104 (38%), Positives = 52/104 (50%), Gaps = 10/104 (9%)
Query: 202 CKCNGHASRCIKSPQGELVCECRHNTAGKDCEKCKPFFSDRPWGRATVYDANECKGGRCK 261
C CNGH+ C P+ VC CR NTAG CEKC SD +G +T +++C+ C
Sbjct: 724 CACNGHSETC--DPETG-VCNCRDNTAGPHCEKC----SDGYYGDSTAGTSSDCQP--CP 774
Query: 262 CNGHASRCIKSPQGALVC-ECRHNTAGKDCEKCKPFFSDRPWGR 304
C G +S + +VC C T GK CE C + P GR
Sbjct: 775 CPGGSSCAVVPKTKEVVCTNCPTGTTGKRCELCDDGYFGDPLGR 818
Score = 35.8 bits (81), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 31/104 (29%), Positives = 45/104 (43%), Gaps = 16/104 (15%)
Query: 204 CNGHASRCIKSPQGELVCECRHNTAGKDCEKCKPFFSDRPWGRATVYDANECKGGRCKCN 263
CN C+K C +NTAG C++CK F P A++CK C CN
Sbjct: 842 CNRLTGECLK---------CIYNTAGFYCDRCKDGFFGNPLAPNP---ADKCKA--CNCN 887
Query: 264 GHASRCIKSPQGALV--CECRHNTAGKDCEKCKPFFSDRPWGRA 305
+ + +S + CEC + G+DC C P F + G+
Sbjct: 888 LYGTMKQQSSCNPVTGQCECLPHVTGQDCGACDPGFYNLQSGQG 931
Score = 31.6 bits (70), Expect = 7.9, Method: Compositional matrix adjust.
Identities = 23/78 (29%), Positives = 38/78 (48%), Gaps = 13/78 (16%)
Query: 221 CECRHNTAGKDCEKCKPFFSDRPWGRATVYDANECKGGRCKCNGHASRC-IKSPQGALVC 279
C C+ G C++C+P F ++ +A C+ C +G C I++ + C
Sbjct: 416 CSCKPGVMGDKCDRCQPGFH-------SLTEAG-CRPCSCDPSGSIDECNIETGR----C 463
Query: 280 ECRHNTAGKDCEKCKPFF 297
C+ N G +CE+CKP F
Sbjct: 464 VCKDNVEGFNCERCKPGF 481
Score = 31.2 bits (69), Expect = 9.8, Method: Compositional matrix adjust.
Identities = 33/113 (29%), Positives = 43/113 (38%), Gaps = 22/113 (19%)
Query: 202 CKCNGHASRCIKSPQGELVC-ECRHNTAGKDCEKCKPFFSDRPWGRATVYDANECKGGRC 260
C C G +S + E+VC C T GK CE C + P GR C+ +C
Sbjct: 773 CPCPGGSSCAVVPKTKEVVCTNCPTGTTGKRCELCDDGYFGDPLGRNGPVRL--CRLCQC 830
Query: 261 ----------KCNGHASRCIKSPQGALVCECRHNTAGKDCEKCKPFFSDRPWG 303
CN C+K C +NTAG C++CK F P
Sbjct: 831 SDNIDPNAVGNCNRLTGECLK---------CIYNTAGFYCDRCKDGFFGNPLA 874
>sp|Q1LVF0|LAMC1_DANRE Laminin subunit gamma-1 OS=Danio rerio GN=lamc1 PE=2 SV=2
Length = 1593
Score = 197 bits (500), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 121/309 (39%), Positives = 164/309 (53%), Gaps = 37/309 (11%)
Query: 30 ENGRPRRCIPDFVNAAFGQEVKVNSVCGLESPERYCDTSG------ACHVCDAGSPRGRF 83
E+ RP+RC+P+FVNAAF V + CG PE +C +G +CH+C+A PR
Sbjct: 27 EDDRPQRCMPEFVNAAFNATVVATNTCG-SPPEEFCVQTGVTGVTKSCHICNAADPRLHH 85
Query: 84 PAEYLTDLNNPSNVTCWRSEAQTSVNSLSASPDNVTLTLSLGKKFELTYISLSFCPKSIK 143
A YLTD N P T W+S QT + + P+++ LTL LGK F++TY+ L F + +
Sbjct: 86 GAVYLTDYNQPVQPTWWQS--QTMLAGIQY-PNSINLTLHLGKSFDITYVRLKF--HTSR 140
Query: 144 PDSLAIYKSQDFGKSWQPLQFYSSQCKKLYGRTATGVISRG-NEQEALCTDRHKK----- 197
P+S AIYK W P Q+YS C+K Y + G I G +EQ+ALCTD
Sbjct: 141 PESFAIYKRSSEDGPWTPYQYYSGSCEKTYSKNNRGFIRTGEDEQQALCTDEFSDISPLY 200
Query: 198 ---------QGGRCKCNGHASRCIK---SPQGELVCECRHNTAGKDCEKCKPFFSDRPWG 245
+G N S ++ + V R NT G + F+D
Sbjct: 201 GGNVAFSTLEGRPSAYNFDNSPVLQDWVTATDIRVTLNRLNTFGDE------VFNDPKVL 254
Query: 246 RATVYDANE-CKGGRCKCNGHASRCIKSPQGALVCECRHNTAGKDCEKCKPFFSDRPWGR 304
++ Y ++ GGRCKCNGHAS C+K+ LVC C+HNT G DC CKPF++DRPW R
Sbjct: 255 KSYYYAISDFAVGGRCKCNGHASECVKNEYSKLVCNCKHNTEGADCNVCKPFYNDRPWRR 314
Query: 305 ATVYDANEC 313
AT + NEC
Sbjct: 315 ATAENPNEC 323
Score = 101 bits (251), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 51/102 (50%), Positives = 62/102 (60%), Gaps = 9/102 (8%)
Query: 199 GGRCKCNGHASRCIKSPQGELVCECRHNTAGKDCEKCKPFFSDRPWGRATVYDANECKGG 258
GGRCKCNGHAS C+K+ +LVC C+HNT G DC CKPF++DRPW RAT + NEC
Sbjct: 267 GGRCKCNGHASECVKNEYSKLVCNCKHNTEGADCNVCKPFYNDRPWRRATAENPNECLP- 325
Query: 259 RCKCNGHASRCIKSPQ-------GALVCECRHNTAGKDCEKC 293
C CNG ++ C P+ G C NT G CE+C
Sbjct: 326 -CNCNGKSAECYFDPELYRATGHGGHCRNCADNTDGPKCERC 366
Score = 57.4 bits (137), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 40/104 (38%), Positives = 53/104 (50%), Gaps = 10/104 (9%)
Query: 201 RCKCNGHASRCIKSPQGELVCECRHNTAGKDCEKCKPFFSDRPWGRATVYDANECKGGRC 260
RC CNGH+ C P+ + C C+HNTAG CE+CK F +G +TV +++CK C
Sbjct: 707 RCNCNGHSDTC--DPETGM-CNCQHNTAGLSCERCKDGF----YGDSTVGSSSDCKA--C 757
Query: 261 KCNGHASRCIKSPQGALVC-ECRHNTAGKDCEKCKPFFSDRPWG 303
C A+ + +VC C T GK CE C F P G
Sbjct: 758 PCPAGATCAVVPKTNEVVCTNCPTGTTGKRCELCDDGFFGDPLG 801
Score = 51.2 bits (121), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 46/156 (29%), Positives = 71/156 (45%), Gaps = 19/156 (12%)
Query: 159 WQPLQFYSSQCKKLYGRTATGVISRGNEQEALCTDRHKKQGGRCKCNGHASRCIKSPQGE 218
W+P ++ K LY T+ + + Q A D R + G +R ++
Sbjct: 619 WRPTIKHADFQKLLYNLTSIMIRGTYSAQSAGYLDNVSLVTAR-RGPGTPARWVEK---- 673
Query: 219 LVCECRHNTAGKDCEKCKPFFSDRPWGRATVYDANECKGGRCKCNGHASRCIKSPQGALV 278
C C G+ CE+C F R + + C+ RC CNGH+ C P+ +
Sbjct: 674 --CTCPQGYLGQHCEQCDQGFR---RSRPELRRFSTCE--RCNCNGHSDTC--DPETGM- 723
Query: 279 CECRHNTAGKDCEKCKPFFSDRPWGRATVYDANECK 314
C C+HNTAG CE+CK F +G +TV +++CK
Sbjct: 724 CNCQHNTAGLSCERCKDGF----YGDSTVGSSSDCK 755
Score = 32.3 bits (72), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 29/103 (28%), Positives = 44/103 (42%), Gaps = 14/103 (13%)
Query: 204 CNGHASRCIKSPQGELVCECRHNTAGKDCEKCKPFFSDRPWGRATVYD-ANECKGGRCKC 262
CN + C+K C +NTAG C++CK F +G A + A++CK +C
Sbjct: 826 CNRESGECLK---------CIYNTAGVFCDRCKQGF----YGDARAANVADKCKPCKCSP 872
Query: 263 NGHASRCIKSPQGALVCECRHNTAGKDCEKCKPFFSDRPWGRA 305
G R Q C C + +DC C+ F + G+
Sbjct: 873 YGTVDRQTACSQVTGQCPCLPHVINRDCGACELGFYNLQSGKG 915
>sp|P02468|LAMC1_MOUSE Laminin subunit gamma-1 OS=Mus musculus GN=Lamc1 PE=1 SV=2
Length = 1607
Score = 192 bits (487), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 125/332 (37%), Positives = 170/332 (51%), Gaps = 40/332 (12%)
Query: 6 LLCVPLLIGAVCGEKIDLNSDPCYENGRPRRCIPDFVNAAFGQEVKVNSVCGLESPERYC 65
LL V + +D +D E GRP+RC+P+FVNAAF V + CG PE YC
Sbjct: 20 LLAVLAAVAGCVRAAMDECAD---EGGRPQRCMPEFVNAAFNVTVVATNTCGT-PPEEYC 75
Query: 66 DTSG------ACHVCDAGSPRGRFPAEYLTDLNNPSNVTCWRSEAQTSVNSLSASPDNVT 119
+G +CH+CDAG + A +LTD NN ++ T W+S QT + + P+++
Sbjct: 76 VQTGVTGVTKSCHLCDAGQQHLQHGAAFLTDYNNQADTTWWQS--QTMLAGVQ-YPNSIN 132
Query: 120 LTLSLGKKFELTYISLSFCPKSIKPDSLAIYKSQDFGKSWQPLQFYSSQCKKLYGRTATG 179
LTL LGK F++TY+ L F + +P+S AIYK W P Q+YS C+ Y + G
Sbjct: 133 LTLHLGKAFDITYVRLKF--HTSRPESFAIYKRTREDGPWIPYQYYSGSCENTYSKANRG 190
Query: 180 VI-SRGNEQEALCTDRHKKQGGRCKCNGHASRCIKSPQGE-----------------LVC 221
I + G+EQ+ALCTD N S P V
Sbjct: 191 FIRTGGDEQQALCTDEFSDISPLTGGNVAFSTLEGRPSAYNFDNSPVLQEWVTATDIRVT 250
Query: 222 ECRHNTAGKDCEKCKPFFSDRPWGRATVYDANE-CKGGRCKCNGHASRCIKSPQGALVCE 280
R NT G + F++ ++ Y ++ GGRCKCNGHAS C+K+ L+C
Sbjct: 251 LNRLNTFGDE------VFNEPKVLKSYYYAISDFAVGGRCKCNGHASECVKNEFDKLMCN 304
Query: 281 CRHNTAGKDCEKCKPFFSDRPWGRATVYDANE 312
C+HNT G DCEKC PFF+DRPW RAT A+E
Sbjct: 305 CKHNTYGVDCEKCLPFFNDRPWRRATAESASE 336
Score = 103 bits (257), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 53/106 (50%), Positives = 64/106 (60%), Gaps = 9/106 (8%)
Query: 199 GGRCKCNGHASRCIKSPQGELVCECRHNTAGKDCEKCKPFFSDRPWGRATVYDANECKGG 258
GGRCKCNGHAS C+K+ +L+C C+HNT G DCEKC PFF+DRPW RAT A+E
Sbjct: 281 GGRCKCNGHASECVKNEFDKLMCNCKHNTYGVDCEKCLPFFNDRPWRRATAESASESLP- 339
Query: 259 RCKCNGHASRCIKSPQ-------GALVCECRHNTAGKDCEKCKPFF 297
C CNG + C P+ G CR NT G CE+C+ F
Sbjct: 340 -CDCNGRSQECYFDPELYRSTGHGGHCTNCRDNTDGAKCERCRENF 384
Score = 53.5 bits (127), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 41/103 (39%), Positives = 54/103 (52%), Gaps = 10/103 (9%)
Query: 202 CKCNGHASRCIKSPQGELVCECRHNTAGKDCEKCKPFFSDRPWGRATVYDANECKGGRCK 261
C CNGH+ C P+ VC+CR NTAG CEKC SD +G +T+ +++C+ C
Sbjct: 722 CTCNGHSETC--DPETG-VCDCRDNTAGPHCEKC----SDGYYGDSTLGTSSDCQP--CP 772
Query: 262 CNGHASRCIKSPQGALVC-ECRHNTAGKDCEKCKPFFSDRPWG 303
C G +S I +VC C TAGK CE C + P G
Sbjct: 773 CPGGSSCAIVPKTKEVVCTHCPTGTAGKRCELCDDGYFGDPLG 815
Score = 40.8 bits (94), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 33/94 (35%), Positives = 45/94 (47%), Gaps = 12/94 (12%)
Query: 221 CECRHNTAGKDCEKCKPFFSDRPWGRATVYDANECKGGRCKCNGHASRCIKSPQGALVCE 280
C C G+ CE C P + R T C CNGH+ C P+ VC+
Sbjct: 688 CTCPVGYGGQFCETCLPGYR-----RETPSLGPYSPCVLCTCNGHSETC--DPETG-VCD 739
Query: 281 CRHNTAGKDCEKCKPFFSDRPWGRATVYDANECK 314
CR NTAG CEKC SD +G +T+ +++C+
Sbjct: 740 CRDNTAGPHCEKC----SDGYYGDSTLGTSSDCQ 769
Score = 33.5 bits (75), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 22/83 (26%), Positives = 36/83 (43%), Gaps = 23/83 (27%)
Query: 221 CECRHNTAGKDCEKCKPFFSDRPWGRATVYDAN------ECKGGRCKCNGHASRCIKSPQ 274
C C+ G C++C+P F ++ +A + +G +CN RC+
Sbjct: 414 CSCKPGVMGDKCDRCQPGFH-------SLTEAGCRPCSCDLRGSTDECNVETGRCV---- 462
Query: 275 GALVCECRHNTAGKDCEKCKPFF 297
C+ N G +CE+CKP F
Sbjct: 463 ------CKDNVEGFNCERCKPGF 479
Score = 33.5 bits (75), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 29/104 (27%), Positives = 46/104 (44%), Gaps = 16/104 (15%)
Query: 204 CNGHASRCIKSPQGELVCECRHNTAGKDCEKCKPFFSDRPWGRATVYDANECKGGRCKCN 263
CN C+K C +NTAG C++CK F P A++CK C CN
Sbjct: 840 CNRLTGECLK---------CIYNTAGFYCDRCKEGFFGNPLAPNP---ADKCKA--CACN 885
Query: 264 GHASRCIKSPQGALV--CECRHNTAGKDCEKCKPFFSDRPWGRA 305
+ + +S + C+C + +G+DC C P + + G+
Sbjct: 886 PYGTVQQQSSCNPVTGQCQCLPHVSGRDCGTCDPGYYNLQSGQG 929
Score = 32.3 bits (72), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 34/111 (30%), Positives = 42/111 (37%), Gaps = 18/111 (16%)
Query: 202 CKCNGHASRCIKSPQGELVC-ECRHNTAGKDCEKCKPFFSDRPWG--------RATVYDA 252
C C G +S I E+VC C TAGK CE C + P G R +
Sbjct: 771 CPCPGGSSCAIVPKTKEVVCTHCPTGTAGKRCELCDDGYFGDPLGSNGPVRLCRPCQCND 830
Query: 253 NECKGGRCKCNGHASRCIKSPQGALVCECRHNTAGKDCEKCKPFFSDRPWG 303
N CN C+K C +NTAG C++CK F P
Sbjct: 831 NIDPNAVGNCNRLTGECLK---------CIYNTAGFYCDRCKEGFFGNPLA 872
>sp|Q24567|NETA_DROME Netrin-A OS=Drosophila melanogaster GN=NetA PE=2 SV=2
Length = 726
Score = 189 bits (480), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 96/172 (55%), Positives = 112/172 (65%), Gaps = 10/172 (5%)
Query: 26 DPCYENGR-PRRCIPDFVNAAFGQEVKVNSVCGLESPERYC---DTSGACHVCDAGSPRG 81
DPCY PR CIPDFVNAA+ V +S CG +RYC D +CH CD P
Sbjct: 38 DPCYNKAHEPRACIPDFVNAAYDAPVVASSTCGSSGAQRYCEYQDHERSCHTCDMTDPLR 97
Query: 82 RFPAEYLTDLNNPSNVTCWRSEAQTSVNSLSASPDNVTLTLSLGKKFELTYISLSFCPKS 141
FPA LTDLNN +NVTCWRSE ++ S DNVTLTLSLGKKFELTY+ L CP +
Sbjct: 98 SFPARSLTDLNNSNNVTCWRSEP------VTGSGDNVTLTLSLGKKFELTYVILQLCPHA 151
Query: 142 IKPDSLAIYKSQDFGKSWQPLQFYSSQCKKLYGRTATGVISRGNEQEALCTD 193
+PDS+ IYKS D G SWQP QF+SSQC++L+GR A R NE EA C+D
Sbjct: 152 PRPDSMVIYKSTDHGLSWQPFQFFSSQCRRLFGRPARQSTGRHNEHEARCSD 203
Score = 115 bits (288), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 60/108 (55%), Positives = 72/108 (66%), Gaps = 11/108 (10%)
Query: 199 GGRCKCNGHASRCIKSPQGELVCECRHNTAGKDCEKCKPFFSDRPWGRATVYDANECKGG 258
GGRCKCNGHAS+C G+L CEC HNTAG+DCE+CKPF DRPW RAT +ANECK
Sbjct: 310 GGRCKCNGHASKCSTDASGQLNCECSHNTAGRDCERCKPFHFDRPWARATAKEANECK-- 367
Query: 259 RCKCNGHASRC------IKSPQGAL--VCE-CRHNTAGKDCEKCKPFF 297
C CN HA +C + QG VC+ CRH+T G++C +CK F
Sbjct: 368 ECNCNKHARQCRFNMEIFRLSQGVSGGVCQNCRHSTTGRNCHQCKEGF 415
Score = 92.8 bits (229), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 41/58 (70%), Positives = 45/58 (77%)
Query: 257 GGRCKCNGHASRCIKSPQGALVCECRHNTAGKDCEKCKPFFSDRPWGRATVYDANECK 314
GGRCKCNGHAS+C G L CEC HNTAG+DCE+CKPF DRPW RAT +ANECK
Sbjct: 310 GGRCKCNGHASKCSTDASGQLNCECSHNTAGRDCERCKPFHFDRPWARATAKEANECK 367
Score = 35.0 bits (79), Expect = 0.80, Method: Compositional matrix adjust.
Identities = 35/117 (29%), Positives = 50/117 (42%), Gaps = 19/117 (16%)
Query: 189 ALCTDRHKKQGGRCKCNGHASRC------IKSPQGEL--VCE-CRHNTAGKDCEKCKP-F 238
A T + + C CN HA +C + QG VC+ CRH+T G++C +CK F
Sbjct: 356 ARATAKEANECKECNCNKHARQCRFNMEIFRLSQGVSGGVCQNCRHSTTGRNCHQCKEGF 415
Query: 239 FSD--RPWGRATVYDANECKGGRCKCNGHASRCIKSPQGALVCECRHNTAGKDCEKC 293
+ D +P V CK C G + + S G C C+ G C +C
Sbjct: 416 YRDATKPLTHRKV-----CKACDCHPIGSSGKICNSTSGQ--CPCKDGVTGLTCNRC 465
>sp|Q18823|LAM2_CAEEL Laminin-like protein lam-2 OS=Caenorhabditis elegans GN=lam-2 PE=1
SV=3
Length = 1633
Score = 187 bits (476), Expect = 6e-47, Method: Compositional matrix adjust.
Identities = 120/320 (37%), Positives = 159/320 (49%), Gaps = 41/320 (12%)
Query: 24 NSDPCYENG--RPRRCIPDFVNAAFGQEVKVNSVCGLESPERYCDTSG------ACHVCD 75
+ +PCY+ +P+RC+PDFVNAAF EV+V + CG + P ++C SG C CD
Sbjct: 36 DGNPCYDRATRQPQRCVPDFVNAAFNLEVQVTNTCGTKRPTKFCVQSGHTGQRSVCETCD 95
Query: 76 AGSPRGRFPAEYLTDLNNPSNVTCWRSEAQTSVNSLSASPDNVTLTLSLGKKFELTYISL 135
PA+YLTD N +N T W+S+ ++ P LTL LGK F++TY+ L
Sbjct: 96 DRHEGFSHPAKYLTDFNVGNNETWWQSD---TMQEGQQYPTTTNLTLVLGKSFDITYVRL 152
Query: 136 SFCPKSIKPDSLAIYKSQDFGKSWQPLQFYSSQCKKLYGRTATGVISRGNEQEALCT--- 192
F S +P+S IYK W+P QFYS C+ YG + I GNE A CT
Sbjct: 153 KFI--SPRPESFTIYKKTHTDSEWEPWQFYSGSCRATYGLSDRAPILPGNEATAQCTKEF 210
Query: 193 -DRHKKQGGRC-------KCNGHASRCIKSPQGELVCEC------RHNTAGKDCEKCKPF 238
D GG + + HA + Q + R NT G +
Sbjct: 211 SDISPITGGNIAFSTLEGRPSAHAFEESEVLQKWVTASAIRISLNRMNTFGDE------V 264
Query: 239 FSDRPWGRATVYDANE-CKGGRCKCNGHASRCIKSP----QGALVCECRHNTAGKDCEKC 293
F D R+ Y ++ GGRCKCNGHAS C+ S + LVC C HNT G DC +C
Sbjct: 265 FKDPQVLRSYYYAISDFAVGGRCKCNGHASECVGSSSVDGENRLVCRCEHNTQGADCNEC 324
Query: 294 KPFFSDRPWGRATVYDANEC 313
PF++DRPW T +ANEC
Sbjct: 325 LPFYNDRPWRSGTSVEANEC 344
Score = 90.5 bits (223), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 50/114 (43%), Positives = 62/114 (54%), Gaps = 13/114 (11%)
Query: 199 GGRCKCNGHASRCIKSP----QGELVCECRHNTAGKDCEKCKPFFSDRPWGRATVYDANE 254
GGRCKCNGHAS C+ S + LVC C HNT G DC +C PF++DRPW T +ANE
Sbjct: 284 GGRCKCNGHASECVGSSSVDGENRLVCRCEHNTQGADCNECLPFYNDRPWRSGTSVEANE 343
Query: 255 CKGGRCKCNGHASRCIKSPQ-------GALVCECRHNTAGKDCEKCKPFFSDRP 301
C C C+ ++RC Q G +C+ NT G CE+C RP
Sbjct: 344 CIA--CNCSQLSNRCYFDQQLFEETGHGGHCIDCQGNTQGVHCEQCIANHWRRP 395
Score = 40.0 bits (92), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 34/115 (29%), Positives = 54/115 (46%), Gaps = 17/115 (14%)
Query: 194 RHKKQGG------RCKCNGHASRCIKSPQGELVCECRHNTAGKDCEKCKPFFSDRPWGRA 247
R K GG +C C+ H++ C ++ G +CE HNTAG CE+C + +G A
Sbjct: 722 RETKFGGPFNHCIKCDCHNHSNSC-EAESGSCICE--HNTAGDTCERCARGY----YGDA 774
Query: 248 TVYDANECKGGRCKCNGHASRCIKSPQGALVC-ECRHNTAGKDCEKCKPFFSDRP 301
+C+ C +G CI G ++C EC + G+ C++C + P
Sbjct: 775 LQGTEEDCQKCPCPNDG---PCILHADGDVICTECPNGYTGRRCDECSDGYFGNP 826
Score = 37.4 bits (85), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 29/86 (33%), Positives = 44/86 (51%), Gaps = 13/86 (15%)
Query: 221 CECRHNTAGKDCEKCKPFFSDRPWGRATVYDA--NECKGGRCKCNGHASRCIKSPQGALV 278
CEC G+ CE C+ F R T + N C +C C+ H++ C ++ G+ +
Sbjct: 702 CECLPGFVGQFCESCESGFR-----RETKFGGPFNHCI--KCDCHNHSNSC-EAESGSCI 753
Query: 279 CECRHNTAGKDCEKC-KPFFSDRPWG 303
CE HNTAG CE+C + ++ D G
Sbjct: 754 CE--HNTAGDTCERCARGYYGDALQG 777
Score = 35.0 bits (79), Expect = 0.72, Method: Compositional matrix adjust.
Identities = 30/108 (27%), Positives = 46/108 (42%), Gaps = 16/108 (14%)
Query: 211 CIKSPQGELVC-ECRHNTAGKDCEKCKPFFSDRPWGRATVYDANECKGGRCKCNGHASRC 269
CI G+++C EC + G+ C++C + P D EC C C+G+
Sbjct: 793 CILHADGDVICTECPNGYTGRRCDECSDGYFGNP------KDGTECV--ECACSGNTDPN 844
Query: 270 IKSPQGALVCECRH---NTAGKDCEKCKPFFSDRPWGRATVYDANECK 314
+ EC+ NT G +CE CKP + WG A + C+
Sbjct: 845 SIGNCDKITGECKKCIFNTHGFNCENCKPGY----WGDALIEPKGNCQ 888
Score = 32.3 bits (72), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 22/79 (27%), Positives = 37/79 (46%), Gaps = 8/79 (10%)
Query: 221 CECRHNTAGKDCEKCKPFFSDRPWGRATVYDANECKGGRCKCNGHASRCIKSPQGALVCE 280
C+C+ G+ C++C F D + N CK C+ +G + + + C
Sbjct: 421 CQCKPGVTGRFCDQCLDGFYD--------FSTNGCKNCGCETSGSLNNQPRCDSSSGSCS 472
Query: 281 CRHNTAGKDCEKCKPFFSD 299
C+ N G+ C+KCKP + D
Sbjct: 473 CKLNVEGRQCDKCKPGYFD 491
Score = 31.2 bits (69), Expect = 9.6, Method: Compositional matrix adjust.
Identities = 24/82 (29%), Positives = 34/82 (41%), Gaps = 13/82 (15%)
Query: 223 CRHNTAGKDCEKCKPFFSDRPWGRATVYDANECKGGRCKCNGHASR-------CIKSPQG 275
C NT G +CE CKP + WG A + C+ C C +R ++ Q
Sbjct: 859 CIFNTHGFNCENCKPGY----WGDALIEPKGNCQS--CGCFAAGTRRPNNDYTLLECNQQ 912
Query: 276 ALVCECRHNTAGKDCEKCKPFF 297
C+C N G C++C F
Sbjct: 913 DGQCDCLPNVIGIQCDQCAHGF 934
>sp|O00634|NET3_HUMAN Netrin-3 OS=Homo sapiens GN=NTN3 PE=2 SV=1
Length = 580
Score = 187 bits (476), Expect = 6e-47, Method: Compositional matrix adjust.
Identities = 125/310 (40%), Positives = 156/310 (50%), Gaps = 49/310 (15%)
Query: 25 SDPCY-ENGRPRRCIPDFVNAAFGQEVKVNSVCGLESPERYCDTSGACHVCDAGSPRGRF 83
+DPC+ E G PR C+P VNAA G+EV +S CG A CDA PR
Sbjct: 27 ADPCHDEGGAPRGCVPGLVNAALGREVLASSTCGRP----------ATRACDASDPRRAH 76
Query: 84 PAEYLTDLNNPSNVTCWRSEAQTSVNSLSASPDNVTLTLSLGKKFELTYISLSFCPKSIK 143
LT ++ CWRSE SL +P NVTLT+ LGK FEL ++SL FC S
Sbjct: 77 SPALLTSPGGTASPLCWRSE------SLPRAPLNVTLTVPLGKAFELVFVSLRFC--SAP 128
Query: 144 PDSLAIYKSQDFGKSWQPLQFYSSQCKKLYGRT-ATGVISRGNEQEALCTDRHKKQGGRC 202
P S+A+ KSQD G+SW PL F+SS C YGR A G EALC Q
Sbjct: 129 PASVALLKSQDHGRSWAPLGFFSSHCDLDYGRLPAPANGPAGPGPEALCFPAPLAQPDGS 188
Query: 203 KCNGHASRCIKSPQGEL----------------VCECRHNTAG--KDCEKCKPFFSDRPW 244
+ + P +L V R +TAG +D E P+
Sbjct: 189 GLLAFSMQDSSPPGLDLDSSPVLQDWVTATDVRVVLTRPSTAGDPRDMEAVVPY------ 242
Query: 245 GRATVYDANECK-GGRCKCNGHASRCIKSPQGALVCECRHNTAGKDCEKCKPFFSDRPWG 303
Y A + + GGRCKCNGHASRC+ QG L+C+CRH T G DC +CKPF+ DRPW
Sbjct: 243 ----SYAATDLQVGGRCKCNGHASRCLLDTQGHLICDCRHGTEGPDCGRCKPFYCDRPWQ 298
Query: 304 RATVYDANEC 313
RAT +++ C
Sbjct: 299 RATARESHAC 308
Score = 113 bits (282), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 61/127 (48%), Positives = 77/127 (60%), Gaps = 13/127 (10%)
Query: 197 KQGGRCKCNGHASRCIKSPQGELVCECRHNTAGKDCEKCKPFFSDRPWGRATVYDANECK 256
+ GGRCKCNGHASRC+ QG L+C+CRH T G DC +CKPF+ DRPW RAT +++ C
Sbjct: 250 QVGGRCKCNGHASRCLLDTQGHLICDCRHGTEGPDCGRCKPFYCDRPWQRATARESHACL 309
Query: 257 GGRCKCNGHASRCIKSPQ---------GALVCECRHNTAGKDCEKCKPFFSDRPWGRATV 307
C CNGHA RC + + G + CRHNTAG+ C C+ F P GRA +
Sbjct: 310 A--CSCNGHARRCRFNMELYRLSGRRSGGVCLNCRHNTAGRHCHYCREGFYRDP-GRA-L 365
Query: 308 YDANECK 314
D C+
Sbjct: 366 SDRRACR 372
Score = 48.5 bits (114), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 36/105 (34%), Positives = 46/105 (43%), Gaps = 13/105 (12%)
Query: 202 CKCNGHASRCIKSPQ---------GELVCECRHNTAGKDCEKCKPFFSDRPWGRATVYDA 252
C CNGHA RC + + G + CRHNTAG+ C C+ F P GRA + D
Sbjct: 311 CSCNGHARRCRFNMELYRLSGRRSGGVCLNCRHNTAGRHCHYCREGFYRDP-GRA-LSDR 368
Query: 253 NECKGGRCKCNGHASRCIKSPQGALVCECRHNTAGKDCEKCKPFF 297
C+ C G A + G C C+ G C +C P F
Sbjct: 369 RACRACDCHPVGAAGKTCNQTTGQ--CPCKDGVTGLTCNRCAPGF 411
>sp|Q9R0B6|LAMC3_MOUSE Laminin subunit gamma-3 OS=Mus musculus GN=Lamc3 PE=2 SV=2
Length = 1581
Score = 187 bits (476), Expect = 7e-47, Method: Compositional matrix adjust.
Identities = 123/312 (39%), Positives = 161/312 (51%), Gaps = 38/312 (12%)
Query: 28 CYEN-GRPRRCIPDFVNAAFGQEVKVNSVCGLESPERYCDTSGA------CHVCDAGSPR 80
CY+ GR +RC+P+F NAAFG+ + + CG PE +C GA C CD P
Sbjct: 34 CYDGVGRAQRCLPEFENAAFGRRAEASHTCG-RPPEDFCPHVGAPGAGLQCQRCDDADPG 92
Query: 81 GRFPAEYLTDLNNPSNVTCWRSEAQTSVNSLSASPDNVTLTLSLGKKFELTYISLSFCPK 140
R A YLTD ++P + T W+S S+ P +V LTLSLGK +E+TY+ L F
Sbjct: 93 RRHDASYLTDFHSPDDSTWWQS---PSMAFGVQYPTSVNLTLSLGKAYEITYVRLKF--H 147
Query: 141 SIKPDSLAIYKSQDFGKSWQPLQFYSSQCKKLYGRTATGVISRG-NEQEALCT----DRH 195
+ +P+S AIYK W+P Q+YS+ C+K YGR + G +E+ A CT D
Sbjct: 148 TSRPESFAIYKRTYASGPWEPYQYYSASCQKTYGRPEGHYLRPGEDERVAFCTSEFSDIS 207
Query: 196 KKQGGRCKCNGHASR-----CIKSPQGE--------LVCECRHNTAGKDCEKCKPFFSDR 242
GG + R +SP + L+ R NT G D F D
Sbjct: 208 PLNGGNVAFSTLEGRPSAYNFEESPVLQEWVTSTDILISLDRLNTFGDD------IFKDP 261
Query: 243 PWGRATVYDANECK-GGRCKCNGHASRCIKSPQGALVCECRHNTAGKDCEKCKPFFSDRP 301
++ Y ++ GGRCKCNGHAS C + G L C C+HNT G DCE+C PFF DRP
Sbjct: 262 RVLQSYYYAVSDFSVGGRCKCNGHASECEPNAAGQLACRCQHNTTGVDCERCLPFFQDRP 321
Query: 302 WGRATVYDANEC 313
W R T DANEC
Sbjct: 322 WARGTAEDANEC 333
Score = 103 bits (256), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 51/103 (49%), Positives = 61/103 (59%), Gaps = 9/103 (8%)
Query: 199 GGRCKCNGHASRCIKSPQGELVCECRHNTAGKDCEKCKPFFSDRPWGRATVYDANECKGG 258
GGRCKCNGHAS C + G+L C C+HNT G DCE+C PFF DRPW R T DANEC
Sbjct: 277 GGRCKCNGHASECEPNAAGQLACRCQHNTTGVDCERCLPFFQDRPWARGTAEDANECL-- 334
Query: 259 RCKCNGHASRCI-------KSPQGALVCECRHNTAGKDCEKCK 294
C C+GH+ C + G CR +T G CE+C+
Sbjct: 335 PCNCSGHSEECTFDRELYRSTGHGGHCQRCRDHTTGPHCERCE 377
Score = 40.4 bits (93), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 28/85 (32%), Positives = 40/85 (47%), Gaps = 7/85 (8%)
Query: 220 VCECRHNTAGKDCEKCKPFFSDRPWGRATVYDANECKGGRCKCNGHASRCIKSPQGALVC 279
+C C H+T G CE+C P F +G A A++C+ C C G ++ G +VC
Sbjct: 733 ICLCGHHTEGPSCERCMPGF----YGNAFSGRADDCQ--PCPCPGQSACATIPESGDVVC 786
Query: 280 -ECRHNTAGKDCEKCKPFFSDRPWG 303
C G+ CE C+ F P G
Sbjct: 787 THCPPGQRGRRCESCEDGFFGDPLG 811
Score = 36.2 bits (82), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 29/103 (28%), Positives = 42/103 (40%), Gaps = 15/103 (14%)
Query: 204 CNGHASRCIKSPQGELVCECRHNTAGKDCEKCKPFFSDRPWGRATVY-DANECKGGRCKC 262
C+ H+ C++ C +NT G CE C+ F +G A ++C C
Sbjct: 836 CDPHSGHCLR---------CLYNTTGAHCEHCREGF----YGSAVATRPVDKCAPCSCDL 882
Query: 263 NGHASRCIKSPQGALVCECRHNTAGKDCEKCKPFFSDRPWGRA 305
G S +P C C +G+DC +C P F D GR
Sbjct: 883 RGSVSEKTCNPVTG-QCVCLPYVSGRDCSRCSPGFYDLQSGRG 924
Score = 32.3 bits (72), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 24/77 (31%), Positives = 33/77 (42%), Gaps = 9/77 (11%)
Query: 221 CECRHNTAGKDCEKCKPFFSDRPWGRATVYDANECKGGRCKCNGHASRCIKSPQGALVCE 280
C C +G+DC +C P F D GR C+ CKC+ S K C
Sbjct: 898 CVCLPYVSGRDCSRCSPGFYDLQSGRG-------CQS--CKCHPLGSLENKCHPKTGQCP 948
Query: 281 CRHNTAGKDCEKCKPFF 297
CR G+ C++C+ F
Sbjct: 949 CRPGVTGQACDRCQLGF 965
>sp|Q9R1A3|NET3_MOUSE Netrin-3 OS=Mus musculus GN=Ntn3 PE=2 SV=1
Length = 580
Score = 187 bits (474), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 130/324 (40%), Positives = 167/324 (51%), Gaps = 39/324 (12%)
Query: 6 LLCVPLLIGAVCGEKIDLNSDPCYENGR-PRRCIPDFVNAAFGQEVKVNSVCGLESPERY 64
LL + A + ++DPCY+ R PR CIP VNAA G+EV +S CG
Sbjct: 8 LLLTAGTLSAALSPGLPASADPCYDEAREPRSCIPGLVNAALGREVLASSTCGRS----- 62
Query: 65 CDTSGACHVCDAGSPRGRFPAEYLTDLNNPSNVTCWRSEAQTSVNSLSASPDNVTLTLSL 124
A VCD+ P+ A+ LT ++ CWRS+ L +P NVTLT+ L
Sbjct: 63 -----ANRVCDSSDPQRAHSADLLTSAPGTASPLCWRSDL------LQQAPFNVTLTVPL 111
Query: 125 GKKFELTYISLSFCPKSIKPDSLAIYKSQDFGKSWQPLQFYSSQCKKLYGRT-ATGVISR 183
GK FEL ++SL FC S P S+A+ KSQD G+SW PL F+SS C YGR A
Sbjct: 112 GKAFELVFVSLRFC--SAPPTSVALLKSQDHGRSWVPLGFFSSSCTLDYGRLPAPADGPS 169
Query: 184 GNEQEALCTDRHKKQ--GGRCKCNGHASRCIK--SPQG------ELVCECRHNTAGKDCE 233
G EALC + Q GG G + ++ SPQG ++ + T +
Sbjct: 170 GPGPEALCFPAPQAQPDGG-----GLLAFSVQDGSPQGLDLDNSPVLQDWVTATDIRIVL 224
Query: 234 KCKPFFSDRPWGRATV---YDANECK-GGRCKCNGHASRCIKSPQGALVCECRHNTAGKD 289
D G TV Y A E + GGRCKCNGHASRC+ G LVC+C+H T G D
Sbjct: 225 TRPAIQGDTRDGGVTVPYSYSATELQVGGRCKCNGHASRCLLDTHGHLVCDCQHGTEGPD 284
Query: 290 CEKCKPFFSDRPWGRATVYDANEC 313
C +CKPF+ DRPW RAT +A+ C
Sbjct: 285 CSRCKPFYCDRPWQRATGQEAHAC 308
Score = 48.1 bits (113), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 35/105 (33%), Positives = 45/105 (42%), Gaps = 13/105 (12%)
Query: 202 CKCNGHASRCIKSPQ---------GELVCECRHNTAGKDCEKCKPFFSDRPWGRATVYDA 252
C CNGHA RC + + G + CRHNTAG+ C C+ F P GR + D
Sbjct: 311 CSCNGHARRCRFNMELYRLSGRRSGGVCLNCRHNTAGRHCHYCREGFYRDP-GR-VLSDR 368
Query: 253 NECKGGRCKCNGHASRCIKSPQGALVCECRHNTAGKDCEKCKPFF 297
C+ C G A + G C C+ G C +C P F
Sbjct: 369 RACRACDCHPVGAAGKTCNQTTGQ--CPCKDGVTGLTCNRCAPGF 411
>sp|Q9Y6N6|LAMC3_HUMAN Laminin subunit gamma-3 OS=Homo sapiens GN=LAMC3 PE=1 SV=3
Length = 1575
Score = 179 bits (455), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 120/312 (38%), Positives = 157/312 (50%), Gaps = 38/312 (12%)
Query: 28 CYEN-GRPRRCIPDFVNAAFGQEVKVNSVCGLESPERYCDTSGA------CHVCDAGSPR 80
CY+ GRP+RC+P F NAAFG+ + + CG PE +C GA C CDA P+
Sbjct: 25 CYDGAGRPQRCLPVFENAAFGRLAQASHTCG-SPPEDFCPHVGAAGAGAHCQRCDAADPQ 83
Query: 81 GRFPAEYLTDLNNPSNVTCWRSEAQTSVNSLSASPDNVTLTLSLGKKFELTYISLSFCPK 140
A YLTD ++ T W+S S+ P +V +TL LGK +E+TY+ L F
Sbjct: 84 RHHNASYLTDFHSQDESTWWQS---PSMAFGVQYPTSVNITLRLGKAYEITYVRLKF--H 138
Query: 141 SIKPDSLAIYKSQDFGKSWQPLQFYSSQCKKLYGRTATGVISRG-NEQEALCT----DRH 195
+ +P+S AIYK W+P QFYS+ C+K YGR + G +E+ A CT D
Sbjct: 139 TSRPESFAIYKRSRADGPWEPYQFYSASCQKTYGRPEGQYLRPGEDERVAFCTSEFSDIS 198
Query: 196 KKQGGRCKCNGHASR-----CIKSPQGE--------LVCECRHNTAGKDCEKCKPFFSDR 242
GG + R +SP + L+ R NT G D F D
Sbjct: 199 PLSGGNVAFSTLEGRPSAYNFEESPGLQEWVTSTELLISLDRLNTFGDD------IFKDP 252
Query: 243 PWGRATVYDANECK-GGRCKCNGHASRCIKSPQGALVCECRHNTAGKDCEKCKPFFSDRP 301
++ Y ++ GGRCKCNGHAS C G L C C+HNT G DCE+C PFF DRP
Sbjct: 253 KVLQSYYYAVSDFSVGGRCKCNGHASECGPDVAGQLACRCQHNTTGTDCERCLPFFQDRP 312
Query: 302 WGRATVYDANEC 313
W R T A+EC
Sbjct: 313 WARGTAEAAHEC 324
Score = 97.8 bits (242), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 50/106 (47%), Positives = 60/106 (56%), Gaps = 9/106 (8%)
Query: 199 GGRCKCNGHASRCIKSPQGELVCECRHNTAGKDCEKCKPFFSDRPWGRATVYDANECKGG 258
GGRCKCNGHAS C G+L C C+HNT G DCE+C PFF DRPW R T A+EC
Sbjct: 268 GGRCKCNGHASECGPDVAGQLACRCQHNTTGTDCERCLPFFQDRPWARGTAEAAHECL-- 325
Query: 259 RCKCNGHASRCI-------KSPQGALVCECRHNTAGKDCEKCKPFF 297
C C+G + C + G CR +TAG CE+C+ F
Sbjct: 326 PCNCSGRSEECTFDRELFRSTGHGGRCHHCRDHTAGPHCERCQENF 371
Score = 37.0 bits (84), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 29/86 (33%), Positives = 39/86 (45%), Gaps = 9/86 (10%)
Query: 220 VCECRHNTAGKDCEKCKPFFSDRPWGRATVYDANECKGGRCKCNGHASRCIKSPQG-ALV 278
+C C H+T G CE+C P F +G A++C+ C C G S C P+ +V
Sbjct: 721 ICVCSHHTEGPSCERCLPGF----YGNPFAGQADDCQ--PCPCPGQ-SACTTIPESREVV 773
Query: 279 C-ECRHNTAGKDCEKCKPFFSDRPWG 303
C C G+ CE C F P G
Sbjct: 774 CTHCPPGQRGRRCEVCDDGFFGDPLG 799
Score = 35.4 bits (80), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 26/83 (31%), Positives = 34/83 (40%), Gaps = 5/83 (6%)
Query: 223 CRHNTAGKDCEKCKPFFSDRPWGRATV-YDANECKGGRCKCNGHASRCIKSPQGALVCEC 281
C HNT G CE C+ F +G A A++C C G S + C C
Sbjct: 834 CLHNTTGDHCEHCQEGF----YGSALAPRPADKCMPCSCHPQGSVSEQMPCDPVTGQCSC 889
Query: 282 RHNTAGKDCEKCKPFFSDRPWGR 304
+ +DC +C P F D GR
Sbjct: 890 LPHVTARDCSRCYPGFFDLQPGR 912
Score = 33.1 bits (74), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 24/84 (28%), Positives = 33/84 (39%), Gaps = 9/84 (10%)
Query: 220 VCECRHNTAGKDCEKCKPFFSDRPWGRATVYDANECKGGRCKCNGHASRCIKSPQGALVC 279
+C C G+ CE C P + R C CN H + C + +C
Sbjct: 672 ICSCPTGYTGQFCESCAPGYK-----REMPQGGPYASCVPCTCNQHGT-CDPN---TGIC 722
Query: 280 ECRHNTAGKDCEKCKPFFSDRPWG 303
C H+T G CE+C P F P+
Sbjct: 723 VCSHHTEGPSCERCLPGFYGNPFA 746
>sp|P15215|LAMC1_DROME Laminin subunit gamma-1 OS=Drosophila melanogaster GN=LanB2 PE=2
SV=2
Length = 1639
Score = 155 bits (391), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 106/313 (33%), Positives = 158/313 (50%), Gaps = 38/313 (12%)
Query: 28 CYE-NGRPRRCIPDFVNAAFGQEVKVNSVCGLESPERYC-DTSGACHV-CDAGSPRGRFP 84
CY+ GRP++C+P+F+NAA+ +++ + CG ++ +C T H C+ P
Sbjct: 57 CYDPYGRPQKCLPEFINAAYQLQIESTNTCGEQNDNHFCIQTMNQNHKNCEFCKYNDHNP 116
Query: 85 AEYLTDLNNPSNVTCWRSEAQTSVNSLSASPDNVTLTLSLGKKFELTYISLSFCPKSIKP 144
+ +LTDL++P + T W+SE T + P+ V LTL LGK +++TY+ + F +S +P
Sbjct: 117 S-FLTDLHDPQSPTWWQSE--TMFEGIQ-HPNYVNLTLHLGKSYDITYVRILF--RSPRP 170
Query: 145 DSLAIYKSQDFGKSWQPLQFYSSQCKKLYGRTATGVISRGN-EQEALCTDRHKK------ 197
+S IYK W P QFYS+ C+ Y + I +G E ALCT +
Sbjct: 171 ESFTIYKRTSESGPWIPYQFYSATCRDTYSLPDSRAIRKGEGEAHALCTSEYSDISPLRD 230
Query: 198 -QGGRCKCNGHASRCIKSPQGEL----------VCECRHNTAGKDCEKCKPFFSDRPWGR 246
+ G S GEL + R NT G + F D +
Sbjct: 231 GEIAFSTLEGRPSGINFERSGELQEWVTATDIRITLDRLNTFGDE------LFGDSQVLK 284
Query: 247 ATVYDANECK-GGRCKCNGHASRCIKSP----QGALVCECRHNTAGKDCEKCKPFFSDRP 301
+ Y ++ G RCKCNGHAS+C+ S + LVCECRHNT G DC++C P ++D
Sbjct: 285 SYFYAISDIAVGARCKCNGHASKCVPSTGMHGERTLVCECRHNTDGPDCDRCLPLYNDLK 344
Query: 302 WGRATVYDANECK 314
W R+T + NECK
Sbjct: 345 WKRSTSTEVNECK 357
Score = 45.8 bits (107), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 36/103 (34%), Positives = 50/103 (48%), Gaps = 11/103 (10%)
Query: 202 CKCNGHASRCIKSPQGELVCECRHNTAGKDCEKCKPFFSDRPWGRATVYDANECKGGRCK 261
C C+GHA C S G C C+HNT G +C++C F +G A N+CK RC
Sbjct: 744 CDCHGHADIC-DSETGR--CICQHNTHGDNCDQCAKGF----YGNALGGTPNDCK--RCP 794
Query: 262 CNGHASRCIKSPQGALVC-ECRHNTAGKDCEKCKPFFSDRPWG 303
C + C++ + ++C EC G CE+C F P G
Sbjct: 795 CPNDGA-CLQINEDTVICTECPKGYFGSRCEQCSDGFFGDPTG 836
Score = 43.9 bits (102), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 47/181 (25%), Positives = 70/181 (38%), Gaps = 32/181 (17%)
Query: 140 KSIKPDSLAIYKSQDFGKSWQPLQFYSSQCKKLYGRTATGVISRGNEQEALCTDRHKKQG 199
+ +K + +++ D+ WQP Q L TA + + + Q D + Q
Sbjct: 637 QGVKEYTFRLHEHHDY--QWQPSQSARGFLSILSNLTAIKIRATYSVQGEAILDDVELQT 694
Query: 200 GRCKCNGHASRCIKSPQGELVCECRHNTAGKDCEKCKPFFSDRPWGRATVYDANECKGG- 258
GH + I+ C C G+ CE C P + P +GG
Sbjct: 695 AHRGAAGHPATWIEQ------CTCPEGYLGQFCESCAPGYRHSP-----------ARGGP 737
Query: 259 -----RCKCNGHASRCIKSPQGALVCECRHNTAGKDCEKCKPFFSDRPWGRATVYDANEC 313
C C+GHA C S G C C+HNT G +C++C F +G A N+C
Sbjct: 738 FMPCIPCDCHGHADIC-DSETGR--CICQHNTHGDNCDQCAKGF----YGNALGGTPNDC 790
Query: 314 K 314
K
Sbjct: 791 K 791
Score = 32.7 bits (73), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 21/77 (27%), Positives = 36/77 (46%), Gaps = 9/77 (11%)
Query: 221 CECRHNTAGKDCEKCKPFFSDRPWGRATVYDANECKGGRCKCNGHASRCIKSPQGALVCE 280
C+C+ N G+DC +C+P G + N C+ C C+ S + + C
Sbjct: 926 CQCKPNVIGRDCGECQP-------GYFNIRSGNGCEN--CLCDPVGSYNSTCDRYSGQCH 976
Query: 281 CRHNTAGKDCEKCKPFF 297
CR G+ C++C+ +F
Sbjct: 977 CRPGVMGQRCDQCENYF 993
Score = 32.7 bits (73), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 24/83 (28%), Positives = 39/83 (46%), Gaps = 11/83 (13%)
Query: 221 CECRHNTAGKDCEKCKPFFSDRPWGRATVYDANECKGGRCKCNGHASRCIKSPQGALVCE 280
C CR G+ C++C+ +F +G + + CK C+C+ S+ + Q C
Sbjct: 975 CHCRPGVMGQRCDQCENYF----YG----FSSEGCKP--CECDESGSKGFQCDQNG-QCP 1023
Query: 281 CRHNTAGKDCEKCKPFFSDRPWG 303
C N G+ C++CK DR G
Sbjct: 1024 CNDNVEGRRCDRCKENKYDRHRG 1046
Score = 32.3 bits (72), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 20/60 (33%), Positives = 29/60 (48%), Gaps = 9/60 (15%)
Query: 220 VCECRHNTAGKDCEKCKPFFSDRPWGRATVYDANECKG-GRCKCNGHASRCIKSPQGALV 278
+C C+ N G+ C +CKP F + D N G C C GH S C+ +P ++V
Sbjct: 481 ICFCKENVEGRRCNECKPGFFN--------LDKNNRFGCTPCFCYGHTSECMTAPGYSIV 532
Score = 32.3 bits (72), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 33/105 (31%), Positives = 48/105 (45%), Gaps = 25/105 (23%)
Query: 204 CNGHASRCIKSPQGELVCECRHNTAGKDCEKC-KPFFSD---RPWG---RATVYDANECK 256
CN C+K C HNTAG+ C++C F D P G R + Y+A
Sbjct: 861 CNRTTGECLK---------CIHNTAGEHCDQCLSGHFGDPLALPHGRCDRCSCYEA---- 907
Query: 257 GGRCKCNGHASRCIKSPQGALVCECRHNTAGKDCEKCKP-FFSDR 300
G + +RC Q C+C+ N G+DC +C+P +F+ R
Sbjct: 908 -GTEQDEQSITRC---DQVTGQCQCKPNVIGRDCGECQPGYFNIR 948
Score = 31.6 bits (70), Expect = 7.7, Method: Compositional matrix adjust.
Identities = 34/142 (23%), Positives = 47/142 (33%), Gaps = 46/142 (32%)
Query: 202 CKCNGHASRCI-------KSPQGELVCECRHNTAGKDCEKCKPFFSDRPWGRATVYDANE 254
C CNG A +C ++ G +CR N G +CE+CK F R G +
Sbjct: 359 CNCNGLADKCFFDANLFNRTGHGGHCLDCRENRDGPNCERCKENFYMRDDGYCVNCACDP 418
Query: 255 CKGGRCKCNGHA-------------SRCIKS-----PQG--------------------- 275
+CN H RC + P G
Sbjct: 419 VGSRSLQCNSHGKCQCKPGVTGDKCDRCDNNYYQFGPHGCQQCGCDSGGSHQNTPACDTE 478
Query: 276 ALVCECRHNTAGKDCEKCKPFF 297
+C C+ N G+ C +CKP F
Sbjct: 479 TGICFCKENVEGRRCNECKPGF 500
>sp|Q61087|LAMB3_MOUSE Laminin subunit beta-3 OS=Mus musculus GN=Lamb3 PE=2 SV=2
Length = 1168
Score = 103 bits (258), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 84/299 (28%), Positives = 141/299 (47%), Gaps = 34/299 (11%)
Query: 37 CIPDFVNAAFG--QEVKVNSVCGLESPERYCDTSGACHV----CDAGSPRGRFPAEYLTD 90
C P + G Q ++ +S CGL PE YC G + CD+ PR + + + +
Sbjct: 26 CYPPVGDLLIGRTQLLRASSTCGLTKPETYCTQYGQWQMKCCKCDSRLPRN-YNSHRVEN 84
Query: 91 LNNPSNVTCWRSEAQTSVNSLSASPDNVTLTLSLGKKFELTYISLSFCPKSIKPDSLAIY 150
+ + S W ++Q V SP V+L L L K+ +L I + F K + P + I
Sbjct: 85 VASSSGPMRW-WQSQNDV-----SP--VSLQLDLDKRMQLQDIMMDF--KGLTPAGMLIE 134
Query: 151 KSQDFGKSWQPLQFYSSQCKKLYGRTATGVISRGNEQEALCTDRHKK-----QGGRCKCN 205
+S DFGK+W+ Q+ ++ C + + G N Q+ C ++ GG+ + N
Sbjct: 135 RSSDFGKTWRVYQYLATDCASTFPQVHQG--QPKNWQDVRCRPLSQRPNGHLTGGKVQLN 192
Query: 206 -GHASRCIKSPQGELVCECRHNTAGK-DCEKCKPFFSDRPWGRATVYDANECK-GGRCKC 262
+ I + Q + + E T + + K P + + + ++ + G C C
Sbjct: 193 LMDLASAIPASQSKKIQELGDITNLRVNFTKLAPVPQRGSYPPSAYFAVSQLRLQGSCFC 252
Query: 263 NGHASRCIKSPQGAL-------VCECRHNTAGKDCEKCKPFFSDRPWGRATVYDANECK 314
+GHA RC +P G+ VC C+HNTAG +C++C PF+++RPW A D +EC+
Sbjct: 253 HGHADRCAPNPGGSTTAVQVNNVCVCQHNTAGPNCDRCAPFYNNRPWRPAEGQDTHECQ 311
Score = 87.0 bits (214), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 48/118 (40%), Positives = 67/118 (56%), Gaps = 19/118 (16%)
Query: 200 GRCKCNGHASRCIKSPQGEL-------VCECRHNTAGKDCEKCKPFFSDRPWGRATVYDA 252
G C C+GHA RC +P G VC C+HNTAG +C++C PF+++RPW A D
Sbjct: 248 GSCFCHGHADRCAPNPGGSTTAVQVNNVCVCQHNTAGPNCDRCAPFYNNRPWRPAEGQDT 307
Query: 253 NECKGGRCKCNGHASRCIKSP---------QGALVCECRHNTAGKDCEKCK-PFFSDR 300
+EC+ RC CNGH+ C P G + CR +T GK+CE+C+ +F +R
Sbjct: 308 HECQ--RCDCNGHSETCHFDPAVFAASQGTNGGVCDNCRDHTEGKNCERCQLHYFRNR 363
>sp|Q13751|LAMB3_HUMAN Laminin subunit beta-3 OS=Homo sapiens GN=LAMB3 PE=1 SV=1
Length = 1172
Score = 99.0 bits (245), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 80/302 (26%), Positives = 133/302 (44%), Gaps = 37/302 (12%)
Query: 37 CIPDFVNAAFGQE--VKVNSVCGLESPERYCDTSGACHV----CDAGSPRGRFPAEYLTD 90
C P + G+ ++ +S CGL PE YC G + CD+ P +
Sbjct: 26 CYPPVGDLLVGRTRFLRASSTCGLTKPETYCTQYGEWQMKCCKCDSRQPHNYYSHRVENV 85
Query: 91 LNNPSNVTCWRSEAQTSVNSLSASPDNVTLTLSLGKKFELTYISLSFCPKSIKPDSLAIY 150
++ + W+S Q VN V+L L L ++F+L + + F + P + I
Sbjct: 86 ASSSGPMRWWQS--QNDVNP-------VSLQLDLDRRFQLQEVMMEF--QGPMPAGMLIE 134
Query: 151 KSQDFGKSWQPLQFYSSQCKKLYGRTATGVISRGNEQEALCTDRHKK-----QGGRCKCN 205
+S DFGK+W+ Q+ ++ C + R G + Q+ C ++ GG+ + N
Sbjct: 135 RSSDFGKTWRVYQYLAADCTSTFPRVRQGRPQ--SWQDVRCQSLPQRPNARLNGGKVQLN 192
Query: 206 -GHASRCIKSPQGELVCECRHNTAGK-DCEKCKPFFSDRPWGRATVYDANECK-GGRCKC 262
I + Q + + E T + + + P + Y ++ + G C C
Sbjct: 193 LMDLVSGIPATQSQKIQEVGEITNLRVNFTRLAPVPQRGYHPPSAYYAVSQLRLQGSCFC 252
Query: 263 NGHASRCIKSPQGAL----------VCECRHNTAGKDCEKCKPFFSDRPWGRATVYDANE 312
+GHA RC P + VC C+HNTAG +CE+C PF+++RPW A DA+E
Sbjct: 253 HGHADRCAPKPGASAGPSTAVQVHDVCVCQHNTAGPNCERCAPFYNNRPWRPAEGQDAHE 312
Query: 313 CK 314
C+
Sbjct: 313 CQ 314
Score = 89.4 bits (220), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 55/124 (44%), Positives = 72/124 (58%), Gaps = 22/124 (17%)
Query: 200 GRCKCNGHASRCIKSP----------QGELVCECRHNTAGKDCEKCKPFFSDRPWGRATV 249
G C C+GHA RC P Q VC C+HNTAG +CE+C PF+++RPW A
Sbjct: 248 GSCFCHGHADRCAPKPGASAGPSTAVQVHDVCVCQHNTAGPNCERCAPFYNNRPWRPAEG 307
Query: 250 YDANECKGGRCKCNGHASRCIKSP------QGAL--VCE-CRHNTAGKDCEKCK-PFFSD 299
DA+EC+ RC CNGH+ C P QGA VC+ CR +T GK+CE+C+ +F +
Sbjct: 308 QDAHECQ--RCDCNGHSETCHFDPAVFAASQGAYGGVCDNCRDHTEGKNCERCQLHYFRN 365
Query: 300 RPWG 303
R G
Sbjct: 366 RRPG 369
Score = 32.3 bits (72), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 23/77 (29%), Positives = 35/77 (45%), Gaps = 8/77 (10%)
Query: 221 CECRHNTAGKDCEKCKPFFSDRPWGRATVYDANECKGGRCKCNGHAS-RCIKSPQGALVC 279
C C+ + G+ C+ CKP F+ + AN RC CN S R + + + C
Sbjct: 399 CVCKEHVQGERCDLCKPGFTGLTY-------ANPQGCHRCDCNILGSRRDMPCDEESGRC 451
Query: 280 ECRHNTAGKDCEKCKPF 296
C N G C++C P+
Sbjct: 452 LCLPNVVGPKCDQCAPY 468
>sp|Q8R4F1|NTNG2_MOUSE Netrin-G2 OS=Mus musculus GN=Ntng2 PE=1 SV=2
Length = 589
Score = 96.7 bits (239), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 100/340 (29%), Positives = 143/340 (42%), Gaps = 48/340 (14%)
Query: 4 LKLLCVPLLIGA--VCGEKIDLNSDPCYENGRPRRCIPDFVNAAFGQEVKVNS---VCGL 58
L L C+PL+ G +C + + P +E C P + +VKV CG
Sbjct: 7 LFLHCLPLVSGDYDICKSWVTTDEGPTWEF---YACQPKVMRLKDYVKVKVEPSGITCG- 62
Query: 59 ESPERYCDTSGA---CHVCDAGSPRGRFPAEYLTDLNNPSNVTCWRSEAQTSVNSLSASP 115
+ PER+C + CDA +P P + D + T W Q+ S SP
Sbjct: 63 DPPERFCSHENPYLCSNECDASNPDLAHPPRLMFDREDEGLATYW----QSVTWSRYPSP 118
Query: 116 DNVTLTLSLGKKFELTY-ISLSFCPKSIKPDSLAIYKSQDFGKSWQPLQFYSSQCKKLYG 174
+TLS K ELT + ++F + +P + + KS D G++WQP QFY+ C + +G
Sbjct: 119 LEANITLSWNKSVELTDDVVVTF--EYGRPTVMVLEKSLDNGRTWQPYQFYAEDCMEAFG 176
Query: 175 RTATGV--ISRGNEQEALCTDRHKKQGGRCKCNGHASRCIKSPQGELVCECRHN-----T 227
+A +S + LCT+ + + G K H ++ N T
Sbjct: 177 MSARRARDMSPSSAHRVLCTEEYSRWAGS-KKEKHVRFEVRDRFAIFAGPDLRNMDNLYT 235
Query: 228 AGKDCEKCKPFFSD--------RP-WGRATVYDANECKG----------GRCKCNGHASR 268
+ + K FF+ RP G V N K GRCKCN HA+
Sbjct: 236 RMESAKGLKEFFTFTDLRMRLLRPALGGTYVQRENLYKYFYAISNIEVIGRCKCNLHANL 295
Query: 269 CIKSPQGALVCECRHNTAGKDCEKCKPFFSDRPWGRATVY 308
C +G+L CEC HNT G DC +CK F R W RA Y
Sbjct: 296 CTVR-EGSLQCECEHNTTGPDCGRCKKNFRTRAW-RAGSY 333
Score = 42.4 bits (98), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 33/99 (33%), Positives = 46/99 (46%), Gaps = 13/99 (13%)
Query: 202 CKCNGHASRCIKSPQGELV--CECRHNTAGKDCEKCKPFFSDRPWGRATVYDANECKGGR 259
C+C GH++RC +V C+HNT G+ C+ C+ + G A + D N C
Sbjct: 413 CECYGHSNRCSYIDFLNVVTCVSCKHNTRGQHCQHCRLGYYRN--GSAELDDENVCI--E 468
Query: 260 CKCNGHAS---RCIKSPQGALVCECRHNTAGKDCEKCKP 295
C CN S RC ++ CECR G C+ C P
Sbjct: 469 CNCNQIGSVHDRCNETG----FCECREGAVGPKCDDCLP 503
>sp|Q96CW9|NTNG2_HUMAN Netrin-G2 OS=Homo sapiens GN=NTNG2 PE=1 SV=2
Length = 530
Score = 96.3 bits (238), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 102/345 (29%), Positives = 143/345 (41%), Gaps = 50/345 (14%)
Query: 1 MHFLKLL--CVPLLIGA--VCGEKIDLNSDPCYENGRPRRCIPDFVNAAFGQEVKVNS-- 54
+H L L C+PL G +C + + P +E C P + +VKV
Sbjct: 2 LHLLALFLHCLPLASGDYDICKSWVTTDEGPTWEF---YACQPKVMRLKDYVKVKVEPSG 58
Query: 55 -VCGLESPERYCDTSGA---CHVCDAGSPRGRFPAEYLTDLNNPSNVTCWRSEAQTSVNS 110
CG + PER+C + CDA +P P + D T W Q+ S
Sbjct: 59 ITCG-DPPERFCSHENPYLCSNECDASNPDLAHPPRLMFDKEEEGLATYW----QSITWS 113
Query: 111 LSASPDNVTLTLSLGKKFELTY-ISLSFCPKSIKPDSLAIYKSQDFGKSWQPLQFYSSQC 169
SP +TLS K ELT + ++F + +P + + KS D G++WQP QFY+ C
Sbjct: 114 RYPSPLEANITLSWNKTVELTDDVVMTF--EYGRPTVMVLEKSLDNGRTWQPYQFYAEDC 171
Query: 170 KKLYGRTATGV--ISRGNEQEALCTDRHKKQGGRCKCNGHASRCIKSPQGELVCECRHN- 226
+ +G +A +S + LCT+ + + G K H ++ N
Sbjct: 172 MEAFGMSARRARDMSSSSAHRVLCTEEYSRWAGS-KKEKHVRFEVRDRFAIFAGPDLRNM 230
Query: 227 ----TAGKDCEKCKPFFS--------DRP-WGRATVYDANECKG----------GRCKCN 263
T + + K FF+ RP G V N K GRCKCN
Sbjct: 231 DNLYTRLESAKGLKEFFTLTDLRMRLLRPALGGTYVQRENLYKYFYAISNIEVIGRCKCN 290
Query: 264 GHASRCIKSPQGALVCECRHNTAGKDCEKCKPFFSDRPWGRATVY 308
HA+ C +G+L CEC HNT G DC KCK F R W RA Y
Sbjct: 291 LHANLCSMR-EGSLQCECEHNTTGPDCGKCKKNFRTRSW-RAGSY 333
Score = 71.6 bits (174), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 51/126 (40%), Positives = 62/126 (49%), Gaps = 16/126 (12%)
Query: 200 GRCKCNGHASRCIKSPQGELVCECRHNTAGKDCEKCKPFFSDRPWGRATVY------DAN 253
GRCKCN HA+ C +G L CEC HNT G DC KCK F R W RA Y N
Sbjct: 285 GRCKCNLHANLCSMR-EGSLQCECEHNTTGPDCGKCKKNFRTRSW-RAGSYLPLPHGSPN 342
Query: 254 ECKG----GRCKCNGHASRC--IKSPQGALVCECRHNTAGKDCEKCKPFFSDRPWGRATV 307
C G C+C GH++RC I C+HNT G+ C+ C+ + G A +
Sbjct: 343 ACATAGSFGNCECYGHSNRCSYIDFLNVVTCVSCKHNTRGQHCQHCRLGYYRN--GSAEL 400
Query: 308 YDANEC 313
D N C
Sbjct: 401 DDENVC 406
>sp|O15230|LAMA5_HUMAN Laminin subunit alpha-5 OS=Homo sapiens GN=LAMA5 PE=1 SV=8
Length = 3695
Score = 94.0 bits (232), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 88/335 (26%), Positives = 127/335 (37%), Gaps = 83/335 (24%)
Query: 39 PDFVNAAFGQEVKVNSVCGLESPER---------YCDTSGA---------------CHVC 74
P + N A G + ++ CG E+P R YC G C +C
Sbjct: 47 PPYFNLAEGARIAASATCGEEAPARGSPRPTEDLYCKLVGGPVAGGDPNQTIRGQYCDIC 106
Query: 75 DAGSPRGRFPAEYLTDLNNPSNVTCWRSEAQTSVNSLSASPDNVTLTLSLGKKFELTYIS 134
A + PA D W Q+ S + V +TL LG+ F + Y+
Sbjct: 107 TAANSNKAHPASNAID----GTERWW----QSPPLSRGLEYNEVNVTLDLGQVFHVAYVL 158
Query: 135 LSFCPKSIKPDSLAIYKSQDFGKSWQPLQFYSSQ---CKKLYGRTATGVISRGNEQEALC 191
+ F S +PD + +S DFG+++QP QF++S C + +G I+R + A+C
Sbjct: 159 IKFA-NSPRPDLWVLERSMDFGRTYQPWQFFASSKRDCLERFGPQTLERITR--DDAAIC 215
Query: 192 TDRHKKQGGRCKCNGHASRCIKSPQGELVCECRHNTAGKDCEKCKPFFS----------- 240
T + SR + GE+V + G P
Sbjct: 216 TTEY-------------SRIVPLENGEIVVSLVNGRPGAMNFSYSPLLREFTKATNVRLR 262
Query: 241 -----------------DRPWGRATVYDANECK-GGRCKCNGHASRC-IKSPQGA--LVC 279
D R Y + GGRC C+GHA C K P L C
Sbjct: 263 FLRTNTLLGHLMGKALRDPTVTRRYYYSIKDISIGGRCVCHGHADACDAKDPTDPFRLQC 322
Query: 280 ECRHNTAGKDCEKCKPFFSDRPWGRATVYDANECK 314
C+HNT G C++C P F+ +PW AT ANEC+
Sbjct: 323 TCQHNTCGGTCDRCCPGFNQQPWKPATANSANECQ 357
Score = 83.2 bits (204), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 51/122 (41%), Positives = 64/122 (52%), Gaps = 21/122 (17%)
Query: 199 GGRCKCNGHASRC-IKSPQG--ELVCECRHNTAGKDCEKCKPFFSDRPWGRATVYDANEC 255
GGRC C+GHA C K P L C C+HNT G C++C P F+ +PW AT ANEC
Sbjct: 297 GGRCVCHGHADACDAKDPTDPFRLQCTCQHNTCGGTCDRCCPGFNQQPWKPATANSANEC 356
Query: 256 KGGRCKCNGHASRCIKSP---------------QGALVC-ECRHNTAGKDCEKCKPFFSD 299
+ C C GHA+ C P QG VC +C+H+T G +CE+C P F
Sbjct: 357 QS--CNCYGHATDCYYDPEVDRRRASQSLDGTYQGGGVCIDCQHHTTGVNCERCLPGFYR 414
Query: 300 RP 301
P
Sbjct: 415 SP 416
Score = 46.2 bits (108), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 35/107 (32%), Positives = 47/107 (43%), Gaps = 18/107 (16%)
Query: 202 CKCNGHASRCIKSPQGELVCECRHNTAGKDCEKCKP-FFSDRPWGRATVYDANECKGGRC 260
C+C+GH+ RC+ P + +C+HNT G CE+C+ F S R D C
Sbjct: 1864 CQCHGHSDRCL--PGSGVCVDCQHNTEGAHCERCQAGFVSSR--------DDPSAPCVSC 1913
Query: 261 KC------NGHASRCIKSPQGALVCECRHNTAGKDCEKCKPFFSDRP 301
C N A C+ G C C+ AG CE+C P F P
Sbjct: 1914 PCPLSVPSNNFAEGCVLR-GGRTQCLCKPGYAGASCERCAPGFFGNP 1959
Score = 43.1 bits (100), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 26/81 (32%), Positives = 39/81 (48%), Gaps = 14/81 (17%)
Query: 220 VCECRHNTAGKDCEKCKPFFSDRPWGRATVYDANECKGGRC---KCNGHASRCIKSPQGA 276
+C C + G C++C P F D GRC +C+GH+ RC+ P
Sbjct: 1830 LCLCPASYRGDSCQECAPGF---------YRDVKGLFLGRCVPCQCHGHSDRCL--PGSG 1878
Query: 277 LVCECRHNTAGKDCEKCKPFF 297
+ +C+HNT G CE+C+ F
Sbjct: 1879 VCVDCQHNTEGAHCERCQAGF 1899
Score = 40.4 bits (93), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 25/83 (30%), Positives = 34/83 (40%), Gaps = 14/83 (16%)
Query: 221 CECRHNTAGKDCEKCKPFFSDRPWGRATVYDANECKGGRCKCNGHASRCIKSPQGALVCE 280
C CR G C+ C P + P+ C+ G C G A P+ + C
Sbjct: 696 CSCRPRVTGLRCDTCVPGAYNFPY----------CEAGSCHPAGLAPVDPALPEAQVPCM 745
Query: 281 CRHNTAGKDCEKCKPFFSDRPWG 303
CR + G C++CKP F WG
Sbjct: 746 CRAHVEGPSCDRCKPGF----WG 764
Score = 36.6 bits (83), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 29/102 (28%), Positives = 43/102 (42%), Gaps = 9/102 (8%)
Query: 198 QGGRCKCNGHASRCIKSPQGELVCECRHNTAGKDCEKCKPFFSDRPWGRATVYDANECKG 257
+ G C G A P+ ++ C CR + G C++CKP F WG + +N
Sbjct: 721 EAGSCHPAGLAPVDPALPEAQVPCMCRAHVEGPSCDRCKPGF----WG---LSPSNPEGC 773
Query: 258 GRCKCN--GHASRCIKSPQGALVCECRHNTAGKDCEKCKPFF 297
RC C+ G + G C C+ + G+ C CK F
Sbjct: 774 TRCSCDLRGTLGGVAECQPGTGQCFCKPHVCGQACASCKDGF 815
Score = 31.6 bits (70), Expect = 7.9, Method: Compositional matrix adjust.
Identities = 24/83 (28%), Positives = 31/83 (37%), Gaps = 7/83 (8%)
Query: 217 GELVCECRHNTAGKDCEKCKPFFSDRPWGRATVYDANECKGGRCKCNGHASRCIK--SPQ 274
G C C+ AG CE+C P F P + + C+ C NG + P
Sbjct: 1933 GRTQCLCKPGYAGASCERCAPGFFGNP-----LVLGSSCQPCDCSGNGDPNLLFSDCDPL 1987
Query: 275 GALVCECRHNTAGKDCEKCKPFF 297
C +T G CE C P F
Sbjct: 1988 TGACRGCLRHTTGPRCEICAPGF 2010
>sp|Q9Y2I2|NTNG1_HUMAN Netrin-G1 OS=Homo sapiens GN=NTNG1 PE=1 SV=3
Length = 539
Score = 92.0 bits (227), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 83/297 (27%), Positives = 123/297 (41%), Gaps = 39/297 (13%)
Query: 37 CIPDFVNAAFGQEVKVNS---VCGLESPERYCDTSGAC---HVCDAGSPRGRFPAEYLTD 90
C P+ + +VK++ CG + PE +C + CDA +P P E + D
Sbjct: 50 CQPESTDMTKYLKVKLDPPDITCG-DPPETFCAMGNPYMCNNECDASTPELAHPPELMFD 108
Query: 91 LNNPSNVTCWRSEAQTSVNSLSASPDNVTLTLSLGKKFELT-YISLSFCPKSIKPDSLAI 149
T W+S P V +TLS K ELT I ++F +S +PD + +
Sbjct: 109 FEGRHPSTFWQSATWKEY----PKPLQVNITLSWSKTIELTDNIVITF--ESGRPDQMIL 162
Query: 150 YKSQDFGKSWQPLQFYSSQCKKLYGRTATGV--ISRGNEQEALCTDRHKK---------- 197
KS D+G++WQP Q+Y++ C + V +S+ E +CT+ +
Sbjct: 163 EKSLDYGRTWQPYQYYATDCLDAFHMDPKSVKDLSQHTVLEIICTEEYSTGYTTNSKIIH 222
Query: 198 ---QGGRCKCNGHASRCIKSPQGELVCECR----HNTAGKDCEKCKP----FFSDRPWGR 246
+ G R + S G+L + +P F D
Sbjct: 223 FEIKDRFAFFAGPRLRNMASLYGQLDTTKKLRDFFTVTDLRIRLLRPAVGEIFVDELHLA 282
Query: 247 ATVYDANECKG-GRCKCNGHASRCIKSPQGALVCECRHNTAGKDCEKCKPFFSDRPW 302
Y ++ K GRCKCN HA+ C+ L CEC HNT G DC KCK + RPW
Sbjct: 283 RYFYAISDIKVRGRCKCNLHATVCVYD-NSKLTCECEHNTTGPDCGKCKKNYQGRPW 338
Score = 77.4 bits (189), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 45/110 (40%), Positives = 57/110 (51%), Gaps = 13/110 (11%)
Query: 197 KQGGRCKCNGHASRCIKSPQGELVCECRHNTAGKDCEKCKPFFSDRPWGRATVY-----D 251
K GRCKCN HA+ C+ +L CEC HNT G DC KCK + RPW +
Sbjct: 292 KVRGRCKCNLHATVCVYD-NSKLTCECEHNTTGPDCGKCKKNYQGRPWSPGSYLPIPKGT 350
Query: 252 ANEC-----KGGRCKCNGHASRC--IKSPQGALVCECRHNTAGKDCEKCK 294
AN C G C+C GH++RC I + C+HNT G+ CE C+
Sbjct: 351 ANTCIPSISSIGNCECFGHSNRCSYIDLLNTVICVSCKHNTRGQHCELCR 400
>sp|Q8R4G0|NTNG1_MOUSE Netrin-G1 OS=Mus musculus GN=Ntng1 PE=1 SV=2
Length = 539
Score = 92.0 bits (227), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 84/297 (28%), Positives = 123/297 (41%), Gaps = 39/297 (13%)
Query: 37 CIPDFVNAAFGQEVKVNS---VCGLESPERYCDTSGAC---HVCDAGSPRGRFPAEYLTD 90
C P+ + +VK++ CG + PE +C + CDA +P P E + D
Sbjct: 50 CQPESTDMTKYLKVKLDPPDITCG-DPPESFCAMGNPYMCNNECDASTPELAHPPELMFD 108
Query: 91 LNNPSNVTCWRSEAQTSVNSLSASPDNVTLTLSLGKKFELT-YISLSFCPKSIKPDSLAI 149
T W+S P V +TLS K ELT I ++F +S +PD + +
Sbjct: 109 FEGRHPSTFWQSATWKEY----PKPLQVNITLSWSKTIELTDNIVITF--ESGRPDQMIL 162
Query: 150 YKSQDFGKSWQPLQFYSSQCKKLYGRTATGV--ISRGNEQEALCTDRHKK---------- 197
KS D+G++WQP Q+Y++ C + V +S+ E +CT+ +
Sbjct: 163 EKSLDYGRTWQPYQYYATDCLHAFHMDPKSVKDLSQHTVLEIICTEEYSTGYSTNSKIIH 222
Query: 198 ---QGGRCKCNGHASRCIKSPQGEL--VCECRHNTAGKDCE------KCKPFFSDRPWGR 246
+ G R + S G+L + R D F D
Sbjct: 223 FEIKDRFAFFAGPRLRNMASLYGQLDTTKKLRDFFTVTDLRIRLLRPAVGEIFVDELHLA 282
Query: 247 ATVYDANECKG-GRCKCNGHASRCIKSPQGALVCECRHNTAGKDCEKCKPFFSDRPW 302
Y ++ K GRCKCN HA+ C+ L CEC HNT G DC KCK + RPW
Sbjct: 283 RYFYAISDIKVRGRCKCNLHATSCLYD-NSKLTCECEHNTTGPDCGKCKKNYQGRPW 338
Score = 77.0 bits (188), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 45/110 (40%), Positives = 57/110 (51%), Gaps = 13/110 (11%)
Query: 197 KQGGRCKCNGHASRCIKSPQGELVCECRHNTAGKDCEKCKPFFSDRPWGRATVY-----D 251
K GRCKCN HA+ C+ +L CEC HNT G DC KCK + RPW +
Sbjct: 292 KVRGRCKCNLHATSCLYD-NSKLTCECEHNTTGPDCGKCKKNYQGRPWSPGSYLPIPKGT 350
Query: 252 ANEC-----KGGRCKCNGHASRC--IKSPQGALVCECRHNTAGKDCEKCK 294
AN C G C+C GH++RC I + C+HNT G+ CE C+
Sbjct: 351 ANTCIPSISSIGNCECFGHSNRCSYIDLLNTVICVSCKHNTRGQHCELCR 400
>sp|Q61001|LAMA5_MOUSE Laminin subunit alpha-5 OS=Mus musculus GN=Lama5 PE=1 SV=4
Length = 3718
Score = 89.7 bits (221), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 85/333 (25%), Positives = 124/333 (37%), Gaps = 79/333 (23%)
Query: 39 PDFVNAAFGQEVKVNSVCGLESPER---------YCDTSGA---------------CHVC 74
P + N A G + ++ CG E+P R YC G C +C
Sbjct: 52 PPYFNLAEGARITASATCGEEAPTRSVSRPTEDLYCKLVGGPVAGGDPNQTIQGQYCDIC 111
Query: 75 DAGSPRGRFPAEYLTDLNNPSNVTCWRSEAQTSVNSLSASPDNVTLTLSLGKKFELTYIS 134
A + P D W+S S + V +TL LG+ F + Y+
Sbjct: 112 TAANSNKAHPVSNAID----GTERWWQSPPL----SRGLEYNEVNVTLDLGQVFHVAYVL 163
Query: 135 LSFCPKSIKPDSLAIYKSQDFGKSWQPLQFYSSQCKKLYGRTATGVISR-GNEQEALCTD 193
+ F S +PD + +S DFG ++QP QF++S + R + R + + +CT
Sbjct: 164 IKFA-NSPRPDLWVLERSTDFGHTYQPWQFFASSKRDCLERFGPRTLERITQDDDVICTT 222
Query: 194 RHKKQGGRCKCNGHASRCIKSPQGELVCECRHNTAGKDCEKCKPFFSD------------ 241
+ SR + GE+V + G P D
Sbjct: 223 EY-------------SRIVPLENGEIVVSLVNGRPGALNFSYSPLLRDFTKATNIRLRFL 269
Query: 242 -------RPWGRAT---------VYDANECK-GGRCKCNGHASRC-IKSPQGA--LVCEC 281
G+A Y + GGRC C+GHA C K P L C C
Sbjct: 270 RTNTLLGHLMGKALRDPTVTRRYYYSIKDISIGGRCVCHGHADVCDAKDPLDPFRLQCAC 329
Query: 282 RHNTAGKDCEKCKPFFSDRPWGRATVYDANECK 314
+HNT G C++C P F+ +PW AT ANEC+
Sbjct: 330 QHNTCGGSCDRCCPGFNQQPWKPATTDSANECQ 362
Score = 82.0 bits (201), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 51/122 (41%), Positives = 64/122 (52%), Gaps = 21/122 (17%)
Query: 199 GGRCKCNGHASRC-IKSPQG--ELVCECRHNTAGKDCEKCKPFFSDRPWGRATVYDANEC 255
GGRC C+GHA C K P L C C+HNT G C++C P F+ +PW AT ANEC
Sbjct: 302 GGRCVCHGHADVCDAKDPLDPFRLQCACQHNTCGGSCDRCCPGFNQQPWKPATTDSANEC 361
Query: 256 KGGRCKCNGHASRCIKSP---------------QGALVC-ECRHNTAGKDCEKCKPFFSD 299
+ C C+GHA C P QG VC +C+H+T G +CE+C P F
Sbjct: 362 QS--CNCHGHAYDCYYDPEVDRRNASQNQDNVYQGGGVCLDCQHHTTGINCERCLPGFFR 419
Query: 300 RP 301
P
Sbjct: 420 AP 421
Score = 53.1 bits (126), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 36/101 (35%), Positives = 48/101 (47%), Gaps = 5/101 (4%)
Query: 202 CKCNGHASRCIKSPQGELVCECRHNTAGKDCEKCKP-FFSDRPWGRATVYDANECKGGRC 260
C+C+GH+ RC+ P + C+HNT G CE+C+P F S P A+ + C
Sbjct: 1865 CQCHGHSDRCL--PGSGICVGCQHNTEGDQCERCRPGFVSSDPSNPASPCVSCPCPLA-V 1921
Query: 261 KCNGHASRCIKSPQGALVCECRHNTAGKDCEKCKPFFSDRP 301
N A C+ G C CR AG CE+C P F P
Sbjct: 1922 PSNNFADGCVLR-NGRTQCLCRPGYAGASCERCAPGFFGNP 1961
Score = 46.6 bits (109), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 27/81 (33%), Positives = 39/81 (48%), Gaps = 14/81 (17%)
Query: 220 VCECRHNTAGKDCEKCKPFFSDRPWGRATVYDANECKGGRC---KCNGHASRCIKSPQGA 276
+C C N G C++C P + D GRC +C+GH+ RC+ P
Sbjct: 1831 LCMCPANYRGDSCQECAPGY---------YRDTKGLFLGRCVPCQCHGHSDRCL--PGSG 1879
Query: 277 LVCECRHNTAGKDCEKCKPFF 297
+ C+HNT G CE+C+P F
Sbjct: 1880 ICVGCQHNTEGDQCERCRPGF 1900
Score = 38.1 bits (87), Expect = 0.088, Method: Compositional matrix adjust.
Identities = 24/83 (28%), Positives = 33/83 (39%), Gaps = 14/83 (16%)
Query: 221 CECRHNTAGKDCEKCKPFFSDRPWGRATVYDANECKGGRCKCNGHASRCIKSPQGALVCE 280
C CR G C+ C P + P+ C+ G C G A P+ C
Sbjct: 702 CRCRPRVTGLHCDMCVPGAYNFPY----------CEAGSCHPAGLAPANPALPETQAPCM 751
Query: 281 CRHNTAGKDCEKCKPFFSDRPWG 303
CR + G C++CKP + WG
Sbjct: 752 CRAHVEGPSCDRCKPGY----WG 770
Score = 37.0 bits (84), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 31/105 (29%), Positives = 44/105 (41%), Gaps = 16/105 (15%)
Query: 198 QGGRCKCNGHASRCIKSPQGELVCECRHNTAGKDCEKCKPFFSDRPWGRATVYDANECKG 257
+ G C G A P+ + C CR + G C++CKP + WG + +N
Sbjct: 727 EAGSCHPAGLAPANPALPETQAPCMCRAHVEGPSCDRCKPGY----WGLSA---SNPEGC 779
Query: 258 GRCKCN-----GHASRCIKSPQGALVCECRHNTAGKDCEKCKPFF 297
RC C+ G + C QG C C+ + GK C CK F
Sbjct: 780 TRCSCDPRGTLGGVTEC----QGNGQCFCKAHVCGKTCAACKDGF 820
Score = 35.4 bits (80), Expect = 0.61, Method: Compositional matrix adjust.
Identities = 28/95 (29%), Positives = 36/95 (37%), Gaps = 8/95 (8%)
Query: 205 NGHASRCIKSPQGELVCECRHNTAGKDCEKCKPFFSDRPWGRATVYDANECKGGRCKCNG 264
N A C+ G C CR AG CE+C P F P + + C+ C NG
Sbjct: 1924 NNFADGCVLR-NGRTQCLCRPGYAGASCERCAPGFFGNP-----LVLGSSCQPCDCSGNG 1977
Query: 265 HASRCIK--SPQGALVCECRHNTAGKDCEKCKPFF 297
+ P C +T G CE+C P F
Sbjct: 1978 DPNMIFSDCDPLTGACRGCLRHTTGPHCERCAPGF 2012
Score = 34.3 bits (77), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 26/98 (26%), Positives = 40/98 (40%), Gaps = 19/98 (19%)
Query: 202 CKCNGHASRCIKSPQGEL---VCECRHNTAGKDCEKCKPFFSDRPWGRATVYDANECKGG 258
C C+G + + P ++ C CR N AG+ C+ C P F P R
Sbjct: 1533 CNCSGPGVQELTDPTCDMDSGQCRCRPNVAGRRCDTCAPGFYGYPSCR------------ 1580
Query: 259 RCKCNGHASRCIKSPQGALV--CECRHNTAGKDCEKCK 294
C+ H + + S L C C+ N G C++C+
Sbjct: 1581 --PCDCHEAGTMASVCDPLTGQCHCKENVQGSRCDQCR 1616
Score = 32.0 bits (71), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 36/128 (28%), Positives = 47/128 (36%), Gaps = 34/128 (26%)
Query: 199 GGRCKCNGHA-----SRCIKSPQG---------------ELV--CECRHNTAGKDCEKCK 236
GG+C C GH SRC G EL C C T DC C+
Sbjct: 1459 GGQCPCRGHVIGRDCSRCATGYWGFPNCRPCDCGARLCDELTGQCICPPRTVPPDCLVCQ 1518
Query: 237 PFFSDRPWGRATVYDANECKGGRCKCNGHASRCIKSP---QGALVCECRHNTAGKDCEKC 293
P + +G + EC C+G + + P + C CR N AG+ C+ C
Sbjct: 1519 P----QSFGCHPLVGCEECN-----CSGPGVQELTDPTCDMDSGQCRCRPNVAGRRCDTC 1569
Query: 294 KPFFSDRP 301
P F P
Sbjct: 1570 APGFYGYP 1577
Score = 31.6 bits (70), Expect = 8.8, Method: Compositional matrix adjust.
Identities = 21/81 (25%), Positives = 29/81 (35%), Gaps = 13/81 (16%)
Query: 221 CECRHNTAGKDCEKCKPFFSDRPWGRATVYDANECKGGRCKCNGHASRCIKSPQGALVCE 280
C+CR G C++C P + P A D +C G +C
Sbjct: 611 CQCRPGFDGPHCDRCLPGYHGYPDCHACACDPRGALDQQCGVGG-------------LCH 657
Query: 281 CRHNTAGKDCEKCKPFFSDRP 301
CR G C++C P F P
Sbjct: 658 CRPGYTGATCQECSPGFYGFP 678
>sp|Q9JI33|NET4_MOUSE Netrin-4 OS=Mus musculus GN=Ntn4 PE=2 SV=2
Length = 628
Score = 89.4 bits (220), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 80/306 (26%), Positives = 128/306 (41%), Gaps = 53/306 (17%)
Query: 35 RRCIPDFVNAAFGQEVKVNSVCGLESPERYCDTSG---------ACHVCDAGSPRGRFPA 85
+ C P N A G++++ +++CG + E +C S C C+A P
Sbjct: 32 KACNPRMGNLALGRKLRADTMCGQNATELFCFYSENADLTCRQPKCDKCNAAHSHLAHPP 91
Query: 86 EYLTDLNNPSNVTCWRSEAQTSVNSLSASPDNVTLTLSLGKKFELTYISLSFCPKSIKPD 145
+ D + T W+S + L L +F T++ + F KS +P
Sbjct: 92 SAMADSSFRFPRTWWQSAEDVHREKIQ---------LDLEAEFYFTHLIMVF--KSPRPA 140
Query: 146 SLAIYKSQDFGKSWQPLQFYSSQCKKLYGRTATGVISRGNEQEALCTDRHKK----QGGR 201
++ + +SQDFGK+W+P +++++ C +G V+ +G A+CT R+ GG
Sbjct: 141 AMVLDRSQDFGKTWKPYKYFATNCSATFG-LEDDVVKKG----AICTSRYSNPFPCTGGE 195
Query: 202 CKCNGHASRC-IKSPQGELVCECRHNTAGK---------DCEKCKPFFSDRPWGRATVYD 251
+ I++P V E T + C+ + VYD
Sbjct: 196 VIFRALSPPYDIENPYSAKVQEQLKITNLRVRLLKRQSCPCQINDLNAKPHHFMHYAVYD 255
Query: 252 ANECKGGRCKCNGHASRC--------IKSPQGALV----CECRHNTAGKDCEKCKPFFSD 299
G C CNGHA +C IK+P V C C+HNTAG C+ C P ++D
Sbjct: 256 F--IVKGSCFCNGHADQCLPVEGFRPIKAPGAFHVVHGRCMCKHNTAGSHCQHCAPLYND 313
Query: 300 RPWGRA 305
RPW A
Sbjct: 314 RPWEAA 319
Score = 77.4 bits (189), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 49/121 (40%), Positives = 62/121 (51%), Gaps = 25/121 (20%)
Query: 200 GRCKCNGHASRC--------IKSPQGELV----CECRHNTAGKDCEKCKPFFSDRPWGRA 247
G C CNGHA +C IK+P V C C+HNTAG C+ C P ++DRPW A
Sbjct: 260 GSCFCNGHADQCLPVEGFRPIKAPGAFHVVHGRCMCKHNTAGSHCQHCAPLYNDRPWEAA 319
Query: 248 T--VYDANECKGGRCKCNGHASRC---------IKSPQGALVCECRHNTAGKDCEKCKPF 296
NEC+ CKCNGHA C + G + C+HNT G+ C++CKP
Sbjct: 320 DGRTGAPNECR--TCKCNGHADTCHFDVNVWEASGNRSGGVCNNCQHNTEGQHCQRCKPG 377
Query: 297 F 297
F
Sbjct: 378 F 378
Score = 37.7 bits (86), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 34/107 (31%), Positives = 45/107 (42%), Gaps = 19/107 (17%)
Query: 202 CKCNGHASRC---------IKSPQGELVCECRHNTAGKDCEKCKP-FFSDRPWGRATVYD 251
CKCNGHA C + G + C+HNT G+ C++CKP F+ D R
Sbjct: 332 CKCNGHADTCHFDVNVWEASGNRSGGVCNNCQHNTEGQHCQRCKPGFYRDL---RRPFSA 388
Query: 252 ANECKGGRCKCNGHASRCIKS-----PQGALVCECRHNTAGKDCEKC 293
+ CK C G A S P C C+ AG C++C
Sbjct: 389 PDACKACSCHPVGSAILPFSSVTFCDPSNG-DCPCKPGVAGPHCDRC 434
>sp|P11046|LAMB1_DROME Laminin subunit beta-1 OS=Drosophila melanogaster GN=LanB1 PE=1
SV=4
Length = 1788
Score = 87.4 bits (215), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 83/317 (26%), Positives = 130/317 (41%), Gaps = 56/317 (17%)
Query: 37 CIPDFVNAAFGQE--VKVNSVCGLESPERYCDTS----GACHVCDAGSPRGRFP------ 84
C P N G+E + +S CGL SPER+C S C +CD P
Sbjct: 54 CYPATGNLLIGRENRLTASSTCGLHSPERFCILSHLQDKKCFLCDTREETKHDPYKNHRI 113
Query: 85 AEYLTDLNNPSNV-TCWRSEAQTSVNSLSASPDNVTLTLSLGKKFELTYISLSFCPKSIK 143
+ + +N+ T W+SE +N T+ L L +F T++ ++F + +
Sbjct: 114 GQIIYKTKPGTNIPTWWQSEN---------GKENATIQLDLEAEFHFTHLIITF--TTFR 162
Query: 144 PDSLAIYKSQDFGKSWQPLQFYSSQCKKLYGRTATGVISRGNEQEALCTDRHKK-QGGRC 202
P ++ I +S DFG++W ++++ CK+ + T + N + +CT R+ + R
Sbjct: 163 PAAMYIERSFDFGQTWHIYRYFAYDCKESFPGVPTVL---ENITDVMCTSRYSNVEPSR- 218
Query: 203 KCNGHASRCIKSP------------QGELVCECRHNTAGKDCEKCKPFFSDRPWGRATVY 250
NG + P Q +L K + R Y
Sbjct: 219 --NGEVIFRVLPPNINVTDPYAEHVQNQLKMTNLRIQMTKLHKLGDNLLDSRLENEEKYY 276
Query: 251 --DANECKGGRCKCNGHASRCI--------KSPQGALV---CECRHNTAGKDCEKCKPFF 297
+N G C C GHAS+C+ + +V CEC HNT G +CE+C+ FF
Sbjct: 277 YGISNMVVRGSCSCYGHASQCLPLDPAFSQADNEDGMVHGRCECTHNTKGMNCEECEDFF 336
Query: 298 SDRPWGRATVYDANECK 314
+D PW A N CK
Sbjct: 337 NDLPWKPAFGKKTNACK 353
Score = 76.6 bits (187), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 48/122 (39%), Positives = 65/122 (53%), Gaps = 22/122 (18%)
Query: 200 GRCKCNGHASRCI--------KSPQGELV---CECRHNTAGKDCEKCKPFFSDRPWGRAT 248
G C C GHAS+C+ + +V CEC HNT G +CE+C+ FF+D PW A
Sbjct: 286 GSCSCYGHASQCLPLDPAFSQADNEDGMVHGRCECTHNTKGMNCEECEDFFNDLPWKPAF 345
Query: 249 VYDANECKGGRCKCNGHASRC-----IKSPQGAL---VCE-CRHNTAGKDCEKCKPFFSD 299
N CK +C+CN HA C + + G + VC+ C HNT G+ CE+C P+F
Sbjct: 346 GKKTNACK--KCECNDHAVSCHFDEAVFTASGFVSGGVCDNCLHNTRGQHCEECMPYFYR 403
Query: 300 RP 301
P
Sbjct: 404 DP 405
Score = 40.8 bits (94), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 25/81 (30%), Positives = 40/81 (49%), Gaps = 14/81 (17%)
Query: 221 CECRHNTAGKDCEKCKPFFSDRPWGRATVYDANECKGGRCKCNGHASRCIKSPQGALVCE 280
C+C NT G++C +C+P + + P EC+ C+CNGHA+ C P +
Sbjct: 856 CQCVPNTYGRECNQCQPGYWNFP----------ECR--VCQCNGHAATC--DPIQGTCID 901
Query: 281 CRHNTAGKDCEKCKPFFSDRP 301
C+ +T G C+ C + P
Sbjct: 902 CQDSTTGYSCDSCLDGYYGNP 922
Score = 35.0 bits (79), Expect = 0.64, Method: Compositional matrix adjust.
Identities = 28/106 (26%), Positives = 44/106 (41%), Gaps = 12/106 (11%)
Query: 202 CKCNGHASRCIKSPQGELVCECRHNTAGKDCEKCKPFFSDRPWGRATVYDANECKGGRCK 261
C+CNGHA+ C P +C+ +T G C+ C + P + + C+ RC
Sbjct: 883 CQCNGHAATC--DPIQGTCIDCQDSTTGYSCDSCLDGYYGNPLFGSEI----GCRPCRCP 936
Query: 262 CN-----GHASRC-IKSPQGALVCECRHNTAGKDCEKCKPFFSDRP 301
HA C + + ++C C+ +G CE C F P
Sbjct: 937 ETVASGLAHADGCSLDTRNNNMLCHCQEGYSGSRCEICADNFFGNP 982
>sp|Q9HB63|NET4_HUMAN Netrin-4 OS=Homo sapiens GN=NTN4 PE=2 SV=2
Length = 628
Score = 85.5 bits (210), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 78/315 (24%), Positives = 133/315 (42%), Gaps = 71/315 (22%)
Query: 35 RRCIPDFVNAAFGQEVKVNSVCGLESPERYCDTSG---------ACHVCDAGSPRGRFPA 85
+ C P N A G+++ ++ CG + E YC S C C+A P
Sbjct: 32 KACNPRMGNLALGRKLWADTTCGQNATELYCFYSENTDLTCRQPKCDKCNAAYPHLAHLP 91
Query: 86 EYLTDLNNPSNVTCWRSEAQTSVNSLSASPDNVTLTLSLGKKFELTYISLSFCPKSIKPD 145
+ D + T W+S + L L +F T++ + F KS +P
Sbjct: 92 SAMADSSFRFPRTWWQSAEDVHREKIQ---------LDLEAEFYFTHLIVMF--KSPRPA 140
Query: 146 SLAIYKSQDFGKSWQPLQFYSSQCKKLYGRTATGVISRGNEQEALCTDRHKK----QGGR 201
++ + +SQDFGK+W+P +++++ C +G V+ +G A+CT ++ GG
Sbjct: 141 AMVLDRSQDFGKTWKPYKYFATNCSATFG-LEDDVVKKG----AICTSKYSSPFPCTGGE 195
Query: 202 CKC----------NGHASRC-----IKSPQGELV----CECRHNTAGKDCEKCKPFFSDR 242
N ++++ I + + +L+ C C+ N ++ +
Sbjct: 196 VIFKALSPPYDTENPYSAKVQEQLKITNLRVQLLKRQSCPCQRNDLNEEPQH-------- 247
Query: 243 PWGRATVYDANECKGGRCKCNGHASRCI--------KSPQGALV----CECRHNTAGKDC 290
+ +YD G C CNGHA +CI K+P + C C+HNTAG C
Sbjct: 248 -FTHYAIYDF--IVKGSCFCNGHADQCIPVHGFRPVKAPGTFHMVHGKCMCKHNTAGSHC 304
Query: 291 EKCKPFFSDRPWGRA 305
+ C P ++DRPW A
Sbjct: 305 QHCAPLYNDRPWEAA 319
Score = 75.9 bits (185), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 48/121 (39%), Positives = 63/121 (52%), Gaps = 25/121 (20%)
Query: 200 GRCKCNGHASRCI--------KSPQGELV----CECRHNTAGKDCEKCKPFFSDRPWGRA 247
G C CNGHA +CI K+P + C C+HNTAG C+ C P ++DRPW A
Sbjct: 260 GSCFCNGHADQCIPVHGFRPVKAPGTFHMVHGKCMCKHNTAGSHCQHCAPLYNDRPWEAA 319
Query: 248 --TVYDANECKGGRCKCNGHASRC---------IKSPQGALVCECRHNTAGKDCEKCKPF 296
NEC+ CKCNGHA C + G + +C+HNT G+ C++CKP
Sbjct: 320 DGKTGAPNECR--TCKCNGHADTCHFDVNVWEASGNRSGGVCDDCQHNTEGQYCQRCKPG 377
Query: 297 F 297
F
Sbjct: 378 F 378
Score = 37.7 bits (86), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 32/108 (29%), Positives = 48/108 (44%), Gaps = 21/108 (19%)
Query: 202 CKCNGHASRC---------IKSPQGELVCECRHNTAGKDCEKCKP-FFSDRPWGRATVYD 251
CKCNGHA C + G + +C+HNT G+ C++CKP F+ D R
Sbjct: 332 CKCNGHADTCHFDVNVWEASGNRSGGVCDDCQHNTEGQYCQRCKPGFYRDL---RRPFSA 388
Query: 252 ANECKGGRCKCNGHASRCIKSPQGALV------CECRHNTAGKDCEKC 293
+ CK C C+ S + + C C+ AG+ C++C
Sbjct: 389 PDACK--PCSCHPVGSAVLPANSVTFCDPSNGDCPCKPGVAGRRCDRC 434
>sp|P02469|LAMB1_MOUSE Laminin subunit beta-1 OS=Mus musculus GN=Lamb1 PE=1 SV=3
Length = 1786
Score = 85.5 bits (210), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 78/303 (25%), Positives = 130/303 (42%), Gaps = 51/303 (16%)
Query: 47 GQEVKVNSVCGLESPERYCDTSGA-----CHVCDAGSPRGRF--PAEYLTD----LNNPS 95
Q++ V S CGL PE YC S C +CD+ P P +L + P+
Sbjct: 47 AQKLSVTSTCGLHKPEPYCIVSHLQEDKKCFICDSRDPYHETLNPDSHLIENVVTTFAPN 106
Query: 96 NVTCWRSEAQTSVNSLSASPDNVTLTLSLGKKFELTYISLSFCPKSIKPDSLAIYKSQDF 155
+ W S N + +NVT+ L L +F T++ ++F K+ +P ++ I +S DF
Sbjct: 107 RLKIWWQ----SENGV----ENVTIQLDLEAEFHFTHLIMTF--KTFRPAAMLIERSSDF 156
Query: 156 GKSWQPLQFYSSQCKKLYGRTATGVISRGNEQEALCTDRHKK-----QGGRCKCNGHASR 210
GK+W ++++ C+ + +TG + + + + +C R+ +G +
Sbjct: 157 GKAWGVYRYFAYDCESSFPGISTGPMKKVD--DIICDSRYSDIEPSTEGEVIFRALDPAF 214
Query: 211 CIKSPQGELVCE-----------CRHNTAGKDCEKCKPFFSDRPWGRATVYDANECKGGR 259
I+ P + + +T G + + ++ + VYD G
Sbjct: 215 KIEDPYSPRIQNLLKITNLRIKFVKLHTLGDNLLDSRMEIREKYY--YAVYDM--VVRGN 270
Query: 260 CKCNGHASRC-----IKSPQGALV---CECRHNTAGKDCEKCKPFFSDRPWGRATVYDAN 311
C C GHAS C + +V C CRHNT G +CE C F+ D PW A ++N
Sbjct: 271 CFCYGHASECAPVDGVNEEVEGMVHGHCMCRHNTKGLNCELCMDFYHDLPWRPAEGRNSN 330
Query: 312 ECK 314
CK
Sbjct: 331 ACK 333
Score = 79.7 bits (195), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 49/132 (37%), Positives = 66/132 (50%), Gaps = 21/132 (15%)
Query: 200 GRCKCNGHASRC-----IKSPQGELV---CECRHNTAGKDCEKCKPFFSDRPWGRATVYD 251
G C C GHAS C + +V C CRHNT G +CE C F+ D PW A +
Sbjct: 269 GNCFCYGHASECAPVDGVNEEVEGMVHGHCMCRHNTKGLNCELCMDFYHDLPWRPAEGRN 328
Query: 252 ANECKGGRCKCNGHASRC---------IKSPQGALVCECRHNTAGKDCEKCKPFFSDRPW 302
+N CK +C CN H+S C + G + C+HNT G++CE+CKPF+ P
Sbjct: 329 SNACK--KCNCNEHSSSCHFDMAVFLATGNVSGGVCDNCQHNTMGRNCEQCKPFYFQHP- 385
Query: 303 GRATVYDANECK 314
+ D N C+
Sbjct: 386 -ERDIRDPNLCE 396
Score = 31.6 bits (70), Expect = 7.5, Method: Compositional matrix adjust.
Identities = 28/100 (28%), Positives = 41/100 (41%), Gaps = 16/100 (16%)
Query: 202 CKCNGHASRCIKSPQGELVCECRHNTAGKDCEKCKPFFSDRPWGRATVYDANECKGGRCK 261
C G AS + G+ C C + C++C P + WG + C+ C+
Sbjct: 823 CHLQGSASAFCDAITGQ--CHCFQGIYARQCDRCLPGY----WGFPS------CQ--PCQ 868
Query: 262 CNGHASRCIKSPQGALVCECRHNTAGKDCEKCKPFFSDRP 301
CNGHA C L C+ T G +CE+C + P
Sbjct: 869 CNGHALDCDTVTGECL--SCQDYTTGHNCERCLAGYYGDP 906
Score = 31.6 bits (70), Expect = 7.7, Method: Compositional matrix adjust.
Identities = 30/108 (27%), Positives = 44/108 (40%), Gaps = 16/108 (14%)
Query: 197 KQGGRCKCNGHAS-RCIKSPQGELVCECRHNTAGKDCEKCKPFFSDRPWGRATVYDANEC 255
+ G C+C+ S + P G C+CR N G+ C +C P +G + N C
Sbjct: 768 QTGLACECDPQGSLSSVCDPNGGQ-CQCRPNVVGRTCNRCAP----GTFG----FGPNGC 818
Query: 256 KGGRCKCNGHASRCIKSPQGALVCECRHNTAGKDCEKCKPFFSDRPWG 303
K C G AS + G C C + C++C P + WG
Sbjct: 819 KPCDCHLQGSASAFCDAITGQ--CHCFQGIYARQCDRCLPGY----WG 860
>sp|Q16787|LAMA3_HUMAN Laminin subunit alpha-3 OS=Homo sapiens GN=LAMA3 PE=1 SV=2
Length = 3333
Score = 85.1 bits (209), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 80/318 (25%), Positives = 126/318 (39%), Gaps = 54/318 (16%)
Query: 39 PDFVNAAFGQEVKVNSVCGLE-------SPERYCDTSGA--------------CHVCDAG 77
P + N A + + CG PE YC G C C++
Sbjct: 49 PTYFNLAEAARIWATATCGERGPGEGRPQPELYCKLVGGPTAPGSGHTIQGQFCDYCNSE 108
Query: 78 SPRGRFPAEYLTDLNNPSNVTCWRSEAQTSVNSLSASPDNVTLTLSLGKKFELTYISLSF 137
PR P D + W+S +S + V LTL LG+ F + YI + F
Sbjct: 109 DPRKAHPVTNAID----GSERWWQSPPLSS----GTQYNRVNLTLDLGQLFHVAYILIKF 160
Query: 138 CPKSIKPDSLAIYKSQDFGKSWQPLQFYSS---QCKKLYGRTATGVISRGNEQ------- 187
S +PD + +S DFG ++ P Q+++ C K +GR A ++R ++
Sbjct: 161 A-NSPRPDLWVLERSVDFGSTYSPWQYFAHSKVDCLKEFGREANMAVTRDDDVLCVTEYS 219
Query: 188 --------EALCTDRHKKQGGRCKCNGHASRCIKSPQGELVCECRHNTA-GKDCEKCKPF 238
E + + + + G + H R + R NT G K +
Sbjct: 220 RIVPLENGEVVVSLINGRPGAKNFTFSHTLREFTKATNIRLRFLRTNTLLGHLISKAQ-- 277
Query: 239 FSDRPWGRATVYDANECK-GGRCKCNGHASRC-IKSPQGALVCECRHNTAGKDCEKCKPF 296
D R Y + GG+C CNGHA C I +P+ CEC+H+T G+ C++C
Sbjct: 278 -RDPTVTRRYYYSIKDISIGGQCVCNGHAEVCNINNPEKLFRCECQHHTCGETCDRCCTG 336
Query: 297 FSDRPWGRATVYDANECK 314
++ R W A ++EC+
Sbjct: 337 YNQRRWRPAAWEQSHECE 354
Score = 77.4 bits (189), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 45/122 (36%), Positives = 65/122 (53%), Gaps = 20/122 (16%)
Query: 199 GGRCKCNGHASRC-IKSPQGELVCECRHNTAGKDCEKCKPFFSDRPWGRATVYDANECKG 257
GG+C CNGHA C I +P+ CEC+H+T G+ C++C ++ R W A ++EC+
Sbjct: 296 GGQCVCNGHAEVCNINNPEKLFRCECQHHTCGETCDRCCTGYNQRRWRPAAWEQSHECEA 355
Query: 258 GRCKCNGHASRCIKSPQ----------------GALVCECRHNTAGKDCEKCKPFFSDRP 301
C C+GHAS C P G + C+HNTAG +CE+C + RP
Sbjct: 356 --CNCHGHASNCYYDPDVERQQASLNTQGIYAGGGVCINCQHNTAGVNCEQCAKGYY-RP 412
Query: 302 WG 303
+G
Sbjct: 413 YG 414
Score = 47.4 bits (111), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 39/118 (33%), Positives = 54/118 (45%), Gaps = 24/118 (20%)
Query: 202 CKCNGHASRCIKSPQ----------------GELVCECRHNTAGKDCEKCKPFFSDRPWG 245
C C+GHAS C P G + C+HNTAG +CE+C + RP+G
Sbjct: 356 CNCHGHASNCYYDPDVERQQASLNTQGIYAGGGVCINCQHNTAGVNCEQCAKGYY-RPYG 414
Query: 246 RATVYDANECKGGRCKCN-GHASRCIKSPQGALVCECRHNTAGKDCEKCKPFFSDRPW 302
V + C C C+ HA C QG+ C C+ N G +CEKC + + P+
Sbjct: 415 -VPVDAPDGCI--PCSCDPEHADGC---EQGSGRCHCKPNFHGDNCEKCAIGYYNFPF 466
Score = 47.4 bits (111), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 33/102 (32%), Positives = 51/102 (50%), Gaps = 13/102 (12%)
Query: 202 CKCNGHASRCIKSPQGELVC-ECRHNTAGKDCEKCKPFFSDRPWGRATVYDANECKGGRC 260
C CNGH+++C G +C C+HNTAG+ CE+C+ + +G A C+ C
Sbjct: 1687 CNCNGHSNQC---QDGSGICVNCQHNTAGEHCERCQEGY----YGNAV---HGSCRACPC 1736
Query: 261 -KCNGHASRCIKSPQGALVCECRHNTAGKDCEKCKPFFSDRP 301
N A+ C+ + G + C C+ G CE+C P + P
Sbjct: 1737 PHTNSFATGCVVN-GGDVRCSCKAGYTGTQCERCAPGYFGNP 1777
Score = 42.0 bits (97), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 28/79 (35%), Positives = 40/79 (50%), Gaps = 16/79 (20%)
Query: 220 VCECRHNTAGKDCEKCKPFFSDRPWGRATVYDANECKGGR---CKCNGHASRCIKSPQGA 276
+C C AG C+ C P + G T GR C CNGH+++C G+
Sbjct: 1653 ICACPPAYAGDSCQGCSPGYYRDHKGLYT---------GRCVPCNCNGHSNQC---QDGS 1700
Query: 277 LVC-ECRHNTAGKDCEKCK 294
+C C+HNTAG+ CE+C+
Sbjct: 1701 GICVNCQHNTAGEHCERCQ 1719
Score = 34.7 bits (78), Expect = 0.93, Method: Compositional matrix adjust.
Identities = 28/95 (29%), Positives = 43/95 (45%), Gaps = 13/95 (13%)
Query: 202 CKCN--GHASRCIKSPQGELVCECRHNTAGKDCEKCKPFFSDRPWGRATVYDANE--CKG 257
CKC+ G S + QG+ C C+ + G C+ C+ G + +N C+G
Sbjct: 631 CKCHKAGTVSGTGECRQGDGDCHCKSHVGGDSCDTCED-------GYFALEKSNYFGCQG 683
Query: 258 GRCKCNGHASRCIKSPQGALVCECRHNTAGKDCEK 292
+C G S P G VC+CR + GK C++
Sbjct: 684 CQCDIGGALSSMCSGPSG--VCQCREHVVGKVCQR 716
Score = 31.6 bits (70), Expect = 7.8, Method: Compositional matrix adjust.
Identities = 21/77 (27%), Positives = 33/77 (42%), Gaps = 14/77 (18%)
Query: 221 CECRHNTAGKDCEKCKPFFSDRPWGRATVYDANECKGGRCKCNGHASRCIKSPQGALVCE 280
CECR G+ C++C + YD C+G C+ + I S G C+
Sbjct: 555 CECRPGVTGQRCDRC----------LSGAYDFPHCQGSSSACDPAGT--INSNLG--YCQ 600
Query: 281 CRHNTAGKDCEKCKPFF 297
C+ + G C +CK +
Sbjct: 601 CKLHVEGPTCSRCKLLY 617
>sp|Q5RB89|NET4_PONAB Netrin-4 OS=Pongo abelii GN=NTN4 PE=2 SV=1
Length = 628
Score = 84.7 bits (208), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 79/317 (24%), Positives = 133/317 (41%), Gaps = 75/317 (23%)
Query: 35 RRCIPDFVNAAFGQEVKVNSVCGLESPERYCDTSG---------ACHVCDAGSPRGRFPA 85
+ C P N A G+++ ++ CG + E YC S C C+A P
Sbjct: 32 KACNPRMGNLALGRKLWADTTCGQNATELYCFYSENTDLTCRQPKCDKCNAAHPHLAHLP 91
Query: 86 EYLTDLNNPSNVTCWRSEAQTSVNSLSASPDNVTLTLSLGKKFELTYISLSFCPKSIKPD 145
+ D + T W+S + L L +F T++ + F KS +P
Sbjct: 92 SAMADSSFRFPRTWWQSAEDVHREKIQ---------LDLEAEFYFTHLIMMF--KSPRPA 140
Query: 146 SLAIYKSQDFGKSWQPLQFYSSQCKKLYGRTATGVISRGNEQEALCTDRHKK----QGGR 201
++ + +SQDFGK+W+P +++++ C +G V+ +G A+CT ++ GG
Sbjct: 141 AMVLDRSQDFGKTWKPYKYFATNCSATFG-LEDDVVKKG----AICTSKYSSPFPCTGGE 195
Query: 202 CKC----------NGHASRC-----IKSPQGELV----CECRHNTAGKDCEKCKPFFSDR 242
N ++++ I + + +L+ C C+ N +D
Sbjct: 196 VIFKALSPPYDTENPYSAKVQEQLKITNLRVQLLKRQSCPCQRND-----------LNDE 244
Query: 243 P--WGRATVYDANECKGGRCKCNGHASRCI--------KSPQGALV----CECRHNTAGK 288
P + +YD G C CNGHA +CI K+P + C C+HNTAG
Sbjct: 245 PQHFTHYAIYDF--IVKGSCFCNGHADQCIPVHGFRPVKAPGTFHMVHGKCMCKHNTAGS 302
Query: 289 DCEKCKPFFSDRPWGRA 305
C+ C P ++D+PW A
Sbjct: 303 HCQHCAPLYNDQPWEAA 319
Score = 74.7 bits (182), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 47/121 (38%), Positives = 63/121 (52%), Gaps = 25/121 (20%)
Query: 200 GRCKCNGHASRCI--------KSPQGELV----CECRHNTAGKDCEKCKPFFSDRPWGRA 247
G C CNGHA +CI K+P + C C+HNTAG C+ C P ++D+PW A
Sbjct: 260 GSCFCNGHADQCIPVHGFRPVKAPGTFHMVHGKCMCKHNTAGSHCQHCAPLYNDQPWEAA 319
Query: 248 --TVYDANECKGGRCKCNGHASRC---------IKSPQGALVCECRHNTAGKDCEKCKPF 296
NEC+ CKCNGHA C + G + +C+HNT G+ C++CKP
Sbjct: 320 DGKTGAPNECR--TCKCNGHADTCHFDVNVWEASGNRSGGVCDDCQHNTEGQHCQRCKPG 377
Query: 297 F 297
F
Sbjct: 378 F 378
Score = 38.5 bits (88), Expect = 0.058, Method: Compositional matrix adjust.
Identities = 32/108 (29%), Positives = 48/108 (44%), Gaps = 21/108 (19%)
Query: 202 CKCNGHASRC---------IKSPQGELVCECRHNTAGKDCEKCKP-FFSDRPWGRATVYD 251
CKCNGHA C + G + +C+HNT G+ C++CKP F+ D R
Sbjct: 332 CKCNGHADTCHFDVNVWEASGNRSGGVCDDCQHNTEGQHCQRCKPGFYRDL---RRPFSA 388
Query: 252 ANECKGGRCKCNGHASRCIKSPQGALV------CECRHNTAGKDCEKC 293
+ CK C C+ S + + C C+ AG+ C++C
Sbjct: 389 PDACK--PCSCHPVGSAVLPANSVTFCDPSNGDCPCKPGVAGRHCDRC 434
>sp|P07942|LAMB1_HUMAN Laminin subunit beta-1 OS=Homo sapiens GN=LAMB1 PE=1 SV=2
Length = 1786
Score = 84.7 bits (208), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 89/352 (25%), Positives = 150/352 (42%), Gaps = 57/352 (16%)
Query: 1 MHFLKLLCVPLLIGAVCGEKIDLNSDPCYENG-RPRRCIPDFVNAAFG--QEVKVNSVCG 57
M L+LL L A+C ++ +P + G C P + G Q++ V S CG
Sbjct: 1 MGLLQLLAFSFL--ALCRARVRAQ-EPEFSYGCAEGSCYPATGDLLIGRAQKLSVTSTCG 57
Query: 58 LESPERYCDTSGA-----CHVCDAGSPRGRF--PAEYLTD----LNNPSNVTCWRSEAQT 106
L PE YC S C +C++ P P +L + P+ + W
Sbjct: 58 LHKPEPYCIVSHLQEDKKCFICNSQDPYHETLNPDSHLIENVVTTFAPNRLKIWWQ---- 113
Query: 107 SVNSLSASPDNVTLTLSLGKKFELTYISLSFCPKSIKPDSLAIYKSQDFGKSWQPLQFYS 166
S N + +NVT+ L L +F T++ ++F K+ +P ++ I +S DFGK+W ++++
Sbjct: 114 SENGV----ENVTIQLDLEAEFHFTHLIMTF--KTFRPAAMLIERSSDFGKTWGVYRYFA 167
Query: 167 SQCKKLYGRTATGVISRGNEQEALCTDRHKK-----QGGRCKCNGHASRCIKSPQGELVC 221
C+ + +TG + + + + +C R+ +G + I+ P +
Sbjct: 168 YDCEASFPGISTGPMKKVD--DIICDSRYSDIEPSTEGEVIFRALDPAFKIEDPYSPRIQ 225
Query: 222 E-----------CRHNTAGKDCEKCKPFFSDRPWGRATVYDANECKGGRCKCNGHASRCI 270
+ +T G + + ++ + VYD G C C GHAS C
Sbjct: 226 NLLKITNLRIKFVKLHTLGDNLLDSRMEIREKYY--YAVYDM--VVRGNCFCYGHASECA 281
Query: 271 ------KSPQGAL--VCECRHNTAGKDCEKCKPFFSDRPWGRATVYDANECK 314
+ +G + C CRHNT G +CE C F+ D PW A ++N CK
Sbjct: 282 PVDGFNEEVEGMVHGHCMCRHNTKGLNCELCMDFYHDLPWRPAEGRNSNACK 333
Score = 77.8 bits (190), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 48/132 (36%), Positives = 67/132 (50%), Gaps = 21/132 (15%)
Query: 200 GRCKCNGHASRCI------KSPQGELV--CECRHNTAGKDCEKCKPFFSDRPWGRATVYD 251
G C C GHAS C + +G + C CRHNT G +CE C F+ D PW A +
Sbjct: 269 GNCFCYGHASECAPVDGFNEEVEGMVHGHCMCRHNTKGLNCELCMDFYHDLPWRPAEGRN 328
Query: 252 ANECKGGRCKCNGHASRC---------IKSPQGALVCECRHNTAGKDCEKCKPFFSDRPW 302
+N CK +C CN H+ C + G + +C+HNT G++CE+CKPF+ P
Sbjct: 329 SNACK--KCNCNEHSISCHFDMAVYLATGNVSGGVCDDCQHNTMGRNCEQCKPFYYQHP- 385
Query: 303 GRATVYDANECK 314
+ D N C+
Sbjct: 386 -ERDIRDPNFCE 396
>sp|A4D0S4|LAMB4_HUMAN Laminin subunit beta-4 OS=Homo sapiens GN=LAMB4 PE=2 SV=1
Length = 1761
Score = 84.3 bits (207), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 55/134 (41%), Positives = 68/134 (50%), Gaps = 24/134 (17%)
Query: 200 GRCKCNGHASRC---------IKSPQGEL--VCECRHNTAGKDCEKCKPFFSDRPWGRAT 248
G C CNGHAS C + SP G + C C+HNT G +CE+CK FF D PW A
Sbjct: 263 GSCFCNGHASECRPMQKMRGDVFSPPGMVHGQCVCQHNTDGPNCERCKDFFQDAPWRPAA 322
Query: 249 VYDANECKGGRCKCNGHASRC-----IKSPQGAL---VCE-CRHNTAGKDCEKCKPFFSD 299
N C+ C CN H+SRC G L VCE C+HNT G+ C++C+P F
Sbjct: 323 DLQDNACRS--CSCNSHSSRCHFDMTTYLASGGLSGGVCEDCQHNTEGQHCDRCRPLFYR 380
Query: 300 RPWGRATVYDANEC 313
P T+ D C
Sbjct: 381 DPL--KTISDPYAC 392
Score = 75.5 bits (184), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 77/307 (25%), Positives = 127/307 (41%), Gaps = 59/307 (19%)
Query: 49 EVKVNSVCGLESPERYCDTS-----GACHVCDAGSPRGRFPAEYLTDLNNPS--NVTC-- 99
++ +S CGL ++YC S C +CD+ RFP + N+ + NV
Sbjct: 42 QLMASSTCGLSRAQKYCILSYLEGEQKCFICDS-----RFPYDPYDQPNSHTIENVIVSF 96
Query: 100 --------WRSEAQTSVNSLSASPDNVTLTLSLGKKFELTYISLSFCPKSIKPDSLAIYK 151
W+SE N L D+V++ L L F +++ L+F K+ +P ++ + +
Sbjct: 97 EPDREKKWWQSE-----NGL----DHVSIRLDLEALFRFSHLILTF--KTFRPAAMLVER 145
Query: 152 SQDFGKSWQPLQFYSSQCKKLYGRTATGVISRGNEQ--EALCTDRHKKQGGRCKCNG-HA 208
S D+G +W+ ++++ C + +G + ++ +D GG
Sbjct: 146 STDYGHNWKVFKYFAKDCATSFPNITSGQAQGVGDIVCDSKYSDIEPSTGGEVVLKVLDP 205
Query: 209 SRCIKSPQGELVCECRHNTAGKDCEKCKPFFSDRPWGR----------ATVYDANECKGG 258
S I++P + + T + D GR +Y+ G
Sbjct: 206 SFEIENPYSPYIQDLVTLTNLRINFTKLHTLGDALLGRRQNDSLDKYYYALYEM--IVRG 263
Query: 259 RCKCNGHASRC---------IKSPQGAL--VCECRHNTAGKDCEKCKPFFSDRPWGRATV 307
C CNGHAS C + SP G + C C+HNT G +CE+CK FF D PW A
Sbjct: 264 SCFCNGHASECRPMQKMRGDVFSPPGMVHGQCVCQHNTDGPNCERCKDFFQDAPWRPAAD 323
Query: 308 YDANECK 314
N C+
Sbjct: 324 LQDNACR 330
Score = 51.2 bits (121), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 38/110 (34%), Positives = 50/110 (45%), Gaps = 18/110 (16%)
Query: 202 CKCNGHASRCIKSPQGEL--------VCE-CRHNTAGKDCEKCKPFFSDRPWGRATVYDA 252
C CN H+SRC L VCE C+HNT G+ C++C+P F P T+ D
Sbjct: 332 CSCNSHSSRCHFDMTTYLASGGLSGGVCEDCQHNTEGQHCDRCRPLFYRDPL--KTISDP 389
Query: 253 NECKGGRCKCNGHAS--RCIKSPQGAL-----VCECRHNTAGKDCEKCKP 295
C C +G S C+ AL C C+ N G C++CKP
Sbjct: 390 YACIPCECDPDGTISGGICVSHSDPALGSVAGQCLCKENVEGAKCDQCKP 439
>sp|P19137|LAMA1_MOUSE Laminin subunit alpha-1 OS=Mus musculus GN=Lama1 PE=1 SV=1
Length = 3084
Score = 82.8 bits (203), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 83/320 (25%), Positives = 130/320 (40%), Gaps = 54/320 (16%)
Query: 35 RRCIPDFVNAAFGQEVKVNSVCGLESPERYCDT----------SGACHVCDAGS--PRGR 82
R P +N A + N+ CG + PE +C C VCD S PR R
Sbjct: 27 RGLFPAILNLATNAHISANATCGEKGPEMFCKLVEHVPGRPVRHAQCRVCDGNSTNPRER 86
Query: 83 FPAEYLTDLNNPSNVTCWRSEAQTSVNSLSASPDNVTLTLSLGKKFELTYISLSFCPKSI 142
P + D N W+S + + VT+TL L + F++ YI + +
Sbjct: 87 HPISHAIDGTN----NWWQSPSIQNGREYHW----VTVTLDLRQVFQVAYIIIK-AANAP 137
Query: 143 KPDSLAIYKSQDFGKSWQPLQFYS---SQCKKLYGRTA-TGVISRGNEQEALCTDRHKK- 197
+P + + +S D G ++P Q+Y+ ++C Y T G + + E +CT + K
Sbjct: 138 RPGNWILERSVD-GVKFKPWQYYAVSDTECLTRYKITPRRGPPTYRADNEVICTSYYSKL 196
Query: 198 ---QGGRCK---CNGHASRCIKSPQGELVCECRH----------------NTAGKDCEKC 235
+ G NG S SPQ R+ + +D
Sbjct: 197 VPLEHGEIHTSLINGRPSADDPSPQLLEFTSARYIRLRLQRIRTLNADLMTLSHRDLRDL 256
Query: 236 KPFFSDRPWGRATVYDANECKGGRCKCNGHASRCIKSPQG-ALVCECRHNTAGKDCEKCK 294
P + R + ++ D + GG C C GHAS C + L C+C HNT G+ C++C
Sbjct: 257 DPIVTRRYY--YSIKDIS--VGGMCICYGHASSCPWDEEAKQLQCQCEHNTCGESCDRCC 312
Query: 295 PFFSDRPWGRATVYDANECK 314
P + +PW T+ NEC+
Sbjct: 313 PGYHQQPWRPGTISSGNECE 332
Score = 63.9 bits (154), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 42/133 (31%), Positives = 61/133 (45%), Gaps = 21/133 (15%)
Query: 199 GGRCKCNGHASRCIKSPQG-ELVCECRHNTAGKDCEKCKPFFSDRPWGRATVYDANECKG 257
GG C C GHAS C + +L C+C HNT G+ C++C P + +PW T+ NEC+
Sbjct: 274 GGMCICYGHASSCPWDEEAKQLQCQCEHNTCGESCDRCCPGYHQQPWRPGTISSGNECE- 332
Query: 258 GRCKCNGHASRCI----------------KSPQGALVCECRHNTAGKDCEKCKPFFSDRP 301
C C+ A C + G + C NT G +CE C + RP
Sbjct: 333 -ECNCHNKAKDCYYDSSVAKERRSLNTAGQYSGGGVCVNCSQNTTGINCETCIDQYY-RP 390
Query: 302 WGRATVYDANECK 314
+ + YD + C+
Sbjct: 391 H-KVSPYDDHPCR 402
Score = 41.2 bits (95), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 31/93 (33%), Positives = 39/93 (41%), Gaps = 10/93 (10%)
Query: 221 CECRHNTAGKDCEKCKPFFSDRPWGRATVYDANECKGGRCKCNGHASRCIKSPQGALVCE 280
CEC G CE C P + + + C+ C+C+GHAS C +
Sbjct: 716 CECPQGYTGTSCEACLPGY----YRVDGILFGGICQ--PCECHGHASECDIH---GICSV 766
Query: 281 CRHNTAGKDCEKCKPFFSDRPWGRATVYDANEC 313
C HNT G CE+C P F P R T D C
Sbjct: 767 CTHNTTGDHCEQCLPGFYGTP-SRGTPGDCQPC 798
Score = 38.1 bits (87), Expect = 0.080, Method: Compositional matrix adjust.
Identities = 36/109 (33%), Positives = 48/109 (44%), Gaps = 12/109 (11%)
Query: 202 CKCNGHASRCIKSPQGELVCE-CRHNTAGKDCEKCKPFFSDRPWGRATVYDANECK-GGR 259
C+C+GHAS C +C C HNT G CE+C P F P R T D C
Sbjct: 749 CECHGHASEC----DIHGICSVCTHNTTGDHCEQCLPGFYGTP-SRGTPGDCQPCACPLS 803
Query: 260 CKCNGHASRCIKSPQGALVC-ECRHNTAGKDCEKCKPFFSDRPWGRATV 307
N + C + +VC +C +G CE+C +D +G TV
Sbjct: 804 IDSNNFSPTCHLTDGEEVVCDQCAPGYSGSWCERC----ADGYYGNPTV 848
Score = 31.6 bits (70), Expect = 9.1, Method: Compositional matrix adjust.
Identities = 25/95 (26%), Positives = 35/95 (36%), Gaps = 22/95 (23%)
Query: 220 VCECRHNTAGKDCEKCKPFFSDRPWGRATVYDANECKGGR-----------CKCNGHASR 268
+C C TAG C+ C P + + GGR C CN H+
Sbjct: 1368 LCVCPPGTAGHSCQDCAPGYYREKLPES---------GGRGPRPLLAPCVPCNCNNHSDV 1418
Query: 269 CIKSPQGALVCECRHNTAGKDCEKCKPFFSDRPWG 303
C P+ CR +T+G CE C + + G
Sbjct: 1419 C--DPETGKCLSCRDHTSGDHCELCASGYYGKVTG 1451
>sp|Q8WTR8|NET5_HUMAN Netrin-5 OS=Homo sapiens GN=NTN5 PE=2 SV=2
Length = 489
Score = 82.0 bits (201), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 67/206 (32%), Positives = 91/206 (44%), Gaps = 26/206 (12%)
Query: 117 NVTLTLSLGKKFELTYISLSFCPKSIKPDSLAIYKSQDFGKSWQPLQFYSSQCKKLYGRT 176
N +LTL+LG F LT +SL FC + P +L + + G W+ L + L G
Sbjct: 62 NGSLTLALGGPFLLTSVSLRFC--TPGPPALILSAAWASGGPWRLLWHRPAWPGALGGPE 119
Query: 177 ATGVISRGNEQEALCTDRHKKQ------------GGRCKCNGHASRCIKSPQGELVCECR 224
S + + + + GRC+C+GHA+RC C CR
Sbjct: 120 RVTFHSTPGPKATVAASHLRVEFGGQAGLAAAGLRGRCQCHGHAARCAAR-ARPPRCHCR 178
Query: 225 HNTAGKDCEKCKPFFSDRPWGRATVYDANECKGGRCKCNGHASRC--------IKSPQGA 276
H+T G CE C+P D PW AT + C C CN HA RC + +
Sbjct: 179 HHTTGPGCESCRPSHRDWPWRPATPRHPHPCLP--CSCNQHARRCRFNSELFRLSGGRSG 236
Query: 277 LVCE-CRHNTAGKDCEKCKPFFSDRP 301
VCE CRH+TAG+ C C+P F P
Sbjct: 237 GVCERCRHHTAGRHCHYCQPGFWRDP 262
Score = 44.7 bits (104), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 34/117 (29%), Positives = 49/117 (41%), Gaps = 13/117 (11%)
Query: 192 TDRHKKQGGRCKCNGHASRC--------IKSPQGELVCE-CRHNTAGKDCEKCKPFFSDR 242
T RH C CN HA RC + + VCE CRH+TAG+ C C+P F
Sbjct: 202 TPRHPHPCLPCSCNQHARRCRFNSELFRLSGGRSGGVCERCRHHTAGRHCHYCQPGFWRD 261
Query: 243 PWGRATVYDANECKGGRCKCNGHASRCIKSPQGALVCECRHNTAGKDCEKCKPFFSD 299
P ++ C+ C+C+ + Q + C C+ G C +C P +
Sbjct: 262 P--SQPIFSRRACRA--CQCHPIGATGGTCNQTSGQCTCKLGVTGLTCNRCGPGYQQ 314
Score = 41.6 bits (96), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 25/56 (44%), Positives = 31/56 (55%), Gaps = 1/56 (1%)
Query: 258 GRCKCNGHASRCIKSPQGALVCECRHNTAGKDCEKCKPFFSDRPWGRATVYDANEC 313
GRC+C+GHA+RC C CRH+T G CE C+P D PW AT + C
Sbjct: 155 GRCQCHGHAARCAAR-ARPPRCHCRHHTTGPGCESCRPSHRDWPWRPATPRHPHPC 209
>sp|Q61789|LAMA3_MOUSE Laminin subunit alpha-3 OS=Mus musculus GN=Lama3 PE=1 SV=3
Length = 3333
Score = 79.0 bits (193), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 83/338 (24%), Positives = 127/338 (37%), Gaps = 86/338 (25%)
Query: 35 RRCIPDFVNAAFGQEVKVNSVCGLESPE-------RYCDTSGA--------------CHV 73
R P + N A + + CG PE +C G C
Sbjct: 42 RSLHPPYFNLAQAARIWATATCGERDPEVSRPRPELFCKLVGGPAAQGSGHTIQGQFCDY 101
Query: 74 CDAGSPRGRFPAEYLTDLNNPSNVTCWRSEAQTSVNSLSASPDNVTLTLSLGKKFELTYI 133
C++ R PA + D + W+S +S + V LTL LG+ F + YI
Sbjct: 102 CNSEDSRKAHPASHAID----GSERWWQSPPLSS----GTQYNQVNLTLDLGQLFHVAYI 153
Query: 134 SLSFCPKSIKPDSLAIYKSQDFGKSWQPLQFYSS---QCKKLYGRTATGVISRGNEQEAL 190
+ F S +PD + +S DFG ++ P Q+++ C + +G+ A I++ + + L
Sbjct: 154 LIKFA-NSPRPDLWILERSVDFGSTYSPWQYFAHSRRDCVEQFGQEANMAITQ--DDQML 210
Query: 191 CTDRHKKQGGRCKCNGHASRCIKSPQGELVCECRHNTAGKDCEKCKPFFSD--RPWGRAT 248
C + SR + GE+V + G K FSD R + +AT
Sbjct: 211 CVTEY-------------SRIVPLENGEIVVSLINGRPGAK----KFAFSDTLREFTKAT 253
Query: 249 ------------------------------VYDANECK-GGRCKCNGHASRC-IKSPQGA 276
Y + GGRC CNGHA C +P+
Sbjct: 254 NIRLRFLRTNTLLGHLISKAERDPTVTRRYYYSIKDISVGGRCVCNGHAEACSADNPEKQ 313
Query: 277 LVCECRHNTAGKDCEKCKPFFSDRPWGRATVYDANECK 314
CEC+H+T G C +C ++ R W A NEC+
Sbjct: 314 FRCECQHHTCGDTCNRCCAGYNQRRWQPAGQEQHNECE 351
Score = 76.3 bits (186), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 48/123 (39%), Positives = 62/123 (50%), Gaps = 22/123 (17%)
Query: 199 GGRCKCNGHASRC-IKSPQGELVCECRHNTAGKDCEKCKPFFSDRPWGRATVYDANECKG 257
GGRC CNGHA C +P+ + CEC+H+T G C +C ++ R W A NEC+
Sbjct: 293 GGRCVCNGHAEACSADNPEKQFRCECQHHTCGDTCNRCCAGYNQRRWQPAGQEQHNECEA 352
Query: 258 GRCKCNGHASRCIKSPQ----------------GALVCECRHNTAGKDCEKC-KPFFSDR 300
C C+GHA C P G + C+HNTAG +CEKC K +F R
Sbjct: 353 --CNCHGHAVDCYYDPDVEHQQASLNSKGVYAGGGVCINCQHNTAGVNCEKCAKGYF--R 408
Query: 301 PWG 303
P G
Sbjct: 409 PHG 411
Score = 46.2 bits (108), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 35/102 (34%), Positives = 49/102 (48%), Gaps = 13/102 (12%)
Query: 202 CKCNGHASRCIKSPQGELVC-ECRHNTAGKDCEKCKPFFSDRPWGRATVYDANECKGGRC 260
C CNGH++RC G +C C+HNTAG+ CE+C+ +G A C+ C
Sbjct: 1687 CNCNGHSNRC---QDGSGICINCQHNTAGEHCERCQAGH----YGNAI---HGSCRVCPC 1736
Query: 261 -KCNGHASRCIKSPQGALVCECRHNTAGKDCEKCKPFFSDRP 301
N A+ C GA+ C C+ G CE+C P + P
Sbjct: 1737 PHTNSFATGCAVD-GGAVRCACKPGYTGTQCERCAPGYFGNP 1777
Score = 46.2 bits (108), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 32/93 (34%), Positives = 46/93 (49%), Gaps = 18/93 (19%)
Query: 208 ASRCIKSPQGELV--CECRHNTAGKDCEKCKPFFSDRPWGRATVYDANECKGGR---CKC 262
AS P+ LV C C + G C+ C+P + +D GR C C
Sbjct: 1639 ASDTGSGPRAHLVEMCACPPDYTGDSCQGCRPGY---------YWDNKSLPVGRCVPCNC 1689
Query: 263 NGHASRCIKSPQGALVC-ECRHNTAGKDCEKCK 294
NGH++RC G+ +C C+HNTAG+ CE+C+
Sbjct: 1690 NGHSNRC---QDGSGICINCQHNTAGEHCERCQ 1719
Score = 42.7 bits (99), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 36/118 (30%), Positives = 49/118 (41%), Gaps = 24/118 (20%)
Query: 202 CKCNGHASRCIKSPQ----------------GELVCECRHNTAGKDCEKC-KPFFSDRPW 244
C C+GHA C P G + C+HNTAG +CEKC K +F RP
Sbjct: 353 CNCHGHAVDCYYDPDVEHQQASLNSKGVYAGGGVCINCQHNTAGVNCEKCAKGYF--RPH 410
Query: 245 GRATVYDANECKGGRCKCNGHASRCIKSPQGALVCECRHNTAGKDCEKCKPFFSDRPW 302
G + G C+ R QG+ C C+ N +G CE C + + P+
Sbjct: 411 GVPV-----DALHGCIPCSCDPERADDCDQGSGHCHCKPNFSGDYCETCADGYYNFPF 463
Score = 33.5 bits (75), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 24/96 (25%), Positives = 39/96 (40%), Gaps = 14/96 (14%)
Query: 202 CKCNGHASRCIKSPQGELVCECRHNTAGKDCEKCKPFFSDRPWGRATVYDANECKGGRCK 261
C+C+ S + G C+C G+ C++C + YD C+G
Sbjct: 533 CQCSTIGSYPVPCDPGNGQCDCLPGITGRQCDRC----------LSGAYDFPYCQGSGSV 582
Query: 262 CNGHASRCIKSPQGALVCECRHNTAGKDCEKCKPFF 297
C H + + S G C+C+ + A C CKP +
Sbjct: 583 C--HPAGTLDSSLG--YCQCKQHVASPTCSVCKPLY 614
Score = 32.0 bits (71), Expect = 5.5, Method: Compositional matrix adjust.
Identities = 21/73 (28%), Positives = 35/73 (47%), Gaps = 9/73 (12%)
Query: 221 CECRHNTAGKDCEKCKP-FFSDRPWGRATVYDANECKGGRCKCNGHASRCIKSPQGALVC 279
C C+ + G C+ C+ FFS ++ + C+G +C G + P G VC
Sbjct: 649 CSCKAHVTGDACDTCEDGFFS---LEKSNYFG---CQGCQCDIGGALTTMCSGPSG--VC 700
Query: 280 ECRHNTAGKDCEK 292
+CR + GK C++
Sbjct: 701 QCREHVEGKQCQR 713
>sp|Q00174|LAMA_DROME Laminin subunit alpha OS=Drosophila melanogaster GN=LanA PE=1 SV=2
Length = 3712
Score = 78.6 bits (192), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 79/309 (25%), Positives = 117/309 (37%), Gaps = 52/309 (16%)
Query: 39 PDFVNAAFGQEVKVNSVCGLES--PERYCDTSGA----------------CHVCDAGSPR 80
P + N A G+++ + CG ++ PE YC GA C CD P
Sbjct: 26 PPYFNLATGRKIYATATCGQDTDGPELYCKLVGANTEHDHIDYSVIQGQVCDYCDPTVPE 85
Query: 81 GRFPAEYLTDLNNPSNVTCWRSEAQTSVNSLSASPDNVTLTLSLGKKFELTYISLSFCPK 140
P E D W+S S + V LT++ ++F + Y+ +
Sbjct: 86 RNHPPENAID----GTEAWWQSPPL----SRGMKFNEVNLTINFEQEFHVAYLFIRM-GN 136
Query: 141 SIKPDSLAIYKSQDFGKSWQPLQFYS---SQCKKLYGRTATGVISRGNEQEALCTDRHKK 197
S +P + KS D+GK+W P Q +S + C+ +G+ I+R + + +CT + K
Sbjct: 137 SPRPGLWTLEKSTDYGKTWTPWQHFSDTPADCETYFGKDTYKPITR--DDDVICTTEYSK 194
Query: 198 ----QGGRCKC---NGHASRCIKSPQGELVCECRHNTAGKDCEKCKPFF--------SDR 242
+ G N S L R + K D
Sbjct: 195 IVPLENGEIPVMLLNERPSSTNYFNSTVLQEWTRATNVRIRLLRTKNLLGHLMSVARQDP 254
Query: 243 PWGRATVYDANECK-GGRCKCNGHASRCI----KSPQGALVCECRHNTAGKDCEKCKPFF 297
R Y + GGRC CNGHA C KSP L C C+H+T G C +C P F
Sbjct: 255 TVTRRYFYSIKDISIGGRCMCNGHADTCDVKDPKSPVRILACRCQHHTCGIQCNECCPGF 314
Query: 298 SDRPWGRAT 306
+ W + T
Sbjct: 315 EQKKWRQNT 323
Score = 70.5 bits (171), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 47/126 (37%), Positives = 62/126 (49%), Gaps = 23/126 (18%)
Query: 199 GGRCKCNGHASRCI----KSPQGELVCECRHNTAGKDCEKCKPFFSDRPWGRATVYDANE 254
GGRC CNGHA C KSP L C C+H+T G C +C P F + W + T
Sbjct: 270 GGRCMCNGHADTCDVKDPKSPVRILACRCQHHTCGIQCNECCPGFEQKKWRQNTNARPFN 329
Query: 255 CKGGRCKCNGHASRCIKSPQ---------------GALVCE-CRHNTAGKDCEKCKPFFS 298
C+ C C+GH++ C + G VC+ C+HNT G +C KCKP +
Sbjct: 330 CE--PCNCHGHSNECKYDEEVNRKGLSLDIHGHYDGGGVCQNCQHNTVGINCNKCKPKYY 387
Query: 299 DRPWGR 304
RP G+
Sbjct: 388 -RPKGK 392
Score = 38.5 bits (88), Expect = 0.061, Method: Compositional matrix adjust.
Identities = 32/105 (30%), Positives = 45/105 (42%), Gaps = 11/105 (10%)
Query: 202 CKCNGHASRCIKSPQGELVCECRHNTAGKDCEKCKPFFSDRPWGRATVYDANECKGGRC- 260
C+CNGH+ C + + +C+H T G CE+C + +G AT +C C
Sbjct: 1809 CECNGHSETCDCATG--ICSKCQHGTEGDHCERCVSGY----YGNATNGTPGDCMICACP 1862
Query: 261 ---KCNGHASRCIKSPQGALV-CECRHNTAGKDCEKCKPFFSDRP 301
N A+ C S G + CEC+ G CE C F P
Sbjct: 1863 LPFDSNNFATSCEISESGDQIHCECKPGYTGPRCESCANGFYGEP 1907
Score = 36.2 bits (82), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 28/99 (28%), Positives = 43/99 (43%), Gaps = 15/99 (15%)
Query: 202 CKCNGHASRCIKSPQGELVCECRHNTAGKDCEKCKPFFSDRPWGRATVYDANECKGGRCK 261
C C+ H S+ + S + C C+ N G+ C+ CK F + P C+ C
Sbjct: 632 CHCDSHGSQGV-SCNSDGQCLCQPNFDGRQCDSCKEGFYNFP----------SCEDCNCD 680
Query: 262 CNGHASR---CIKSPQGALVCECRHNTAGKDCEKCKPFF 297
G + C P G L C+C+ G+ C +CKP +
Sbjct: 681 PAGVIDKFAGCGSVPVGEL-CKCKERVTGRICNECKPLY 718
Score = 34.7 bits (78), Expect = 0.95, Method: Compositional matrix adjust.
Identities = 27/86 (31%), Positives = 37/86 (43%), Gaps = 12/86 (13%)
Query: 221 CECRHNTAGKDCEKCKPFFSDRPWGRATVYDANECKGGRCKCNGHASRCIKSPQGALVCE 280
C C +G CE C P + P G Y C C+CNGH+ C + +
Sbjct: 1776 CSCPPGYSGHSCEDCAPGYYRDPSGPYGGY----CI--PCECNGHSETC--DCATGICSK 1827
Query: 281 CRHNTAGKDCEKCKPFFSDRPWGRAT 306
C+H T G CE+C + +G AT
Sbjct: 1828 CQHGTEGDHCERCVSGY----YGNAT 1849
Score = 34.7 bits (78), Expect = 0.98, Method: Compositional matrix adjust.
Identities = 23/84 (27%), Positives = 39/84 (46%), Gaps = 6/84 (7%)
Query: 211 CIKSPQGELVCECRHNTAGKDCEKCKPFFSDRPWGRATVYDANECKGGRCKCNGHASRCI 270
C P GEL C+C+ G+ C +CKP + W + + C+ C +G S
Sbjct: 691 CGSVPVGEL-CKCKERVTGRICNECKPLY----W-NLNISNTEGCEICDCWTDGTISALD 744
Query: 271 KSPQGALVCECRHNTAGKDCEKCK 294
+ C C+ +T G+ C++C+
Sbjct: 745 TCTSKSGQCPCKPHTQGRRCQECR 768
Score = 32.7 bits (73), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 28/99 (28%), Positives = 37/99 (37%), Gaps = 15/99 (15%)
Query: 205 NGHASRCIKSPQGELV-CECRHNTAGKDCEKCKPFFSDRPWGRATVYDANECKGG----- 258
N A+ C S G+ + CEC+ G CE C F P V EC G
Sbjct: 1868 NNFATSCEISESGDQIHCECKPGYTGPRCESCANGFYGEPESIGQVCKPCECSGNINPED 1927
Query: 259 RCKCNGHASRCIKSPQGALVCECRHNTAGKDCEKCKPFF 297
+ C+ C++ C +NT G C C P F
Sbjct: 1928 QGSCDTRTGECLR---------CLNNTFGAACNLCAPGF 1957
Score = 31.6 bits (70), Expect = 8.3, Method: Compositional matrix adjust.
Identities = 21/74 (28%), Positives = 30/74 (40%), Gaps = 12/74 (16%)
Query: 220 VCECRHNTAGKDCEKCKPFFSDRPWGRATVYDANECKGGRCKCNGHASRCIKSPQGALVC 279
CECR N G+ C+ C + + P C+ C G GA C
Sbjct: 1486 TCECRQNIEGRACDVCSNGYFNFP----------HCEQCSCHKPGTELEVCDKIDGA--C 1533
Query: 280 ECRHNTAGKDCEKC 293
C+ N G+DC++C
Sbjct: 1534 FCKKNVVGRDCDQC 1547
>sp|Q60675|LAMA2_MOUSE Laminin subunit alpha-2 OS=Mus musculus GN=Lama2 PE=1 SV=1
Length = 3106
Score = 78.2 bits (191), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 85/319 (26%), Positives = 124/319 (38%), Gaps = 52/319 (16%)
Query: 35 RRCIPDFVNAAFGQEVKVNSVCGLESPERYCDT----------SGACHVCDAGS--PRGR 82
R P +N A + N+ CG + PE YC + C +C+ S P R
Sbjct: 33 RGLFPAVLNLASNALITTNATCGEKGPEMYCKLVEHVPGQPVRNPQCRICNQNSSNPYQR 92
Query: 83 FPAEYLTDLNNPSNVTCWRSEAQTSVNSLSASPDNVTLTLSLGKKFELTYISLSFCPKSI 142
P D N T W+S + + VT+TL L + F++ Y+ + S
Sbjct: 93 HPITNAIDGKN----TWWQSPSIKN----GVEYHYVTITLDLQQVFQIAYVIVK-AANSP 143
Query: 143 KPDSLAIYKSQDFG--KSWQPLQFYSSQCKKLYG-RTATGVISRGNEQEALCTDRHKK-- 197
+P + + +S D K WQ ++C LY TG S + E +CT + K
Sbjct: 144 RPGNWILERSLDDVEYKPWQYHAVTDTECLTLYNIYPRTGPPSYAKDDEVICTSFYSKIH 203
Query: 198 --QGGRCKC---NGHASRCIKSPQGELVCECRH----------------NTAGKDCEKCK 236
+ G NG S SP+ R+ A KD +
Sbjct: 204 PLENGEIHISLINGRPSADDPSPELLEFTSARYIRLRFQRIRTLNADLMMFAHKDPREID 263
Query: 237 PFFSDRPWGRATVYDANECKGGRCKCNGHASRCIKSP-QGALVCECRHNTAGKDCEKCKP 295
P + R + +V D + GG C C GHA C P CEC HNT G+ C++C P
Sbjct: 264 PIVTRRYY--YSVKDIS--VGGMCICYGHARACPLDPATNKSRCECEHNTCGESCDRCCP 319
Query: 296 FFSDRPWGRATVYDANECK 314
F +PW T +EC+
Sbjct: 320 GFHQKPWRAGTFLTKSECE 338
Score = 68.6 bits (166), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 46/127 (36%), Positives = 57/127 (44%), Gaps = 20/127 (15%)
Query: 199 GGRCKCNGHASRCIKSP-QGELVCECRHNTAGKDCEKCKPFFSDRPWGRATVYDANECKG 257
GG C C GHA C P + CEC HNT G+ C++C P F +PW T +EC+
Sbjct: 280 GGMCICYGHARACPLDPATNKSRCECEHNTCGESCDRCCPGFHQKPWRAGTFLTKSECEA 339
Query: 258 GRCKCNGHASRCI----------------KSPQGALVCECRHNTAGKDCEKCKPFFSDRP 301
C C+G A C K G + C HNTAG +CE C F RP
Sbjct: 340 --CNCHGKAEECYYDETVASRNLSLNIHGKYIGGGVCINCTHNTAGINCETCVDGFF-RP 396
Query: 302 WGRATVY 308
G + Y
Sbjct: 397 KGVSPNY 403
Score = 46.6 bits (109), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 31/85 (36%), Positives = 43/85 (50%), Gaps = 9/85 (10%)
Query: 214 SPQGELV--CECRHNTAGKDCEKCKPFF---SDRPWGRATVYDANECKGGRCKCNGHASR 268
SP L+ C+C +G CE C P F P GR C C+CNGH+S+
Sbjct: 1367 SPPAHLIERCDCPPGYSGLSCETCAPGFYRLRSEPGGRTPGPTLGTCV--PCQCNGHSSQ 1424
Query: 269 CIKSPQGALVCECRHNTAGKDCEKC 293
C P+ ++ C+H+TAG CE+C
Sbjct: 1425 C--DPETSVCQNCQHHTAGDFCERC 1447
Score = 39.3 bits (90), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 29/93 (31%), Positives = 41/93 (44%), Gaps = 12/93 (12%)
Query: 201 RCKCNGHASRCIKSPQGELVCECRHNTAGKDCEKCKPFFSDRPWGRATVYDANECKGGRC 260
RC NG S + G+ CECR N G+ C++CKP GR + C
Sbjct: 915 RCDINGSFSEDCHTRTGQ--CECRPNVQGRHCDECKPETFGLQLGRGCL---------PC 963
Query: 261 KCNGHASRCIKSPQGALVCECRHNTAGKDCEKC 293
CN S+ + + C C+ AGK C++C
Sbjct: 964 NCNSFGSKSFDC-EASGQCWCQPGVAGKKCDRC 995
Score = 38.5 bits (88), Expect = 0.058, Method: Compositional matrix adjust.
Identities = 30/105 (28%), Positives = 47/105 (44%), Gaps = 12/105 (11%)
Query: 202 CKCNGHASRCIKSPQGELVCECRHNTAGKDCEKCKPFFSDRPWGRATVYDANECKGGRCK 261
C+CNGH+S+C P+ + C+H+TAG CE+C + G N+C+ C
Sbjct: 1416 CQCNGHSSQC--DPETSVCQNCQHHTAGDFCERCALGYYGIVRGL-----PNDCQPCACP 1468
Query: 262 C----NGHASRCIKSPQGALVCE-CRHNTAGKDCEKCKPFFSDRP 301
N + C+ C C G+ CE+C P ++ P
Sbjct: 1469 LISPSNNFSPSCVLEGLEDYRCTACPRGYEGQYCERCAPGYTGSP 1513
Score = 37.4 bits (85), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 26/73 (35%), Positives = 36/73 (49%), Gaps = 8/73 (10%)
Query: 223 CRHNTAGKDCEKCKPFFSDRPWGRATVYDANECKGGRCKCNGHASRCIKSPQGALVCECR 282
C+ T G+ CE C +D +G A + C+ RC NG S + G CECR
Sbjct: 885 CKPGTTGRYCELC----ADGYFGDAV--NTKNCQPCRCDINGSFSEDCHTRTGQ--CECR 936
Query: 283 HNTAGKDCEKCKP 295
N G+ C++CKP
Sbjct: 937 PNVQGRHCDECKP 949
>sp|P25391|LAMA1_HUMAN Laminin subunit alpha-1 OS=Homo sapiens GN=LAMA1 PE=1 SV=2
Length = 3075
Score = 78.2 bits (191), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 82/318 (25%), Positives = 125/318 (39%), Gaps = 46/318 (14%)
Query: 33 RPRRCIPDFVNAAFGQEVKVNSVCGLESPERYCDT----------SGACHVCDAGS--PR 80
R R P +N A + N+ CG + PE +C + C +CD S PR
Sbjct: 18 RQRGLFPAILNLASNAHISTNATCGEKGPEMFCKLVEHVPGRPVRNPQCRICDGNSANPR 77
Query: 81 GRFPAEYLTDLNNPSNVTCWRSEAQTSVNSLSASPDNVTLTLSLGKKFELTYISLSFCPK 140
R P + D N W+S + + VT+TL L + F++ Y+ +
Sbjct: 78 ERHPISHAIDGTN----NWWQSPSIQNGREYHW----VTITLDLRQVFQVAYVIIK-AAN 128
Query: 141 SIKPDSLAIYKSQDFGKSWQPLQFYS---SQCKKLYGRTAT-GVISRGNEQEALCTDRHK 196
+ +P + + +S D G ++ P Q+Y+ S+C Y T G + + E +CT +
Sbjct: 129 APRPGNWILERSLD-GTTFSPWQYYAVSDSECLSRYNITPRRGPPTYRADDEVICTSYYS 187
Query: 197 K----QGGRCK---CNGHASRCIKSPQGELVCECRH-----------NTAGKDCEKCKPF 238
+ + G NG S SP+ R+ N +P
Sbjct: 188 RLVPLEHGEIHTSLINGRPSADDLSPKLLEFTSARYIRLRLQRIRTLNADLMTLSHREPK 247
Query: 239 FSDRPWGRATVYDANECK-GGRCKCNGHASRC-IKSPQGALVCECRHNTAGKDCEKCKPF 296
D R Y + GG C C GHAS C L C+C HNT G+ C +C P
Sbjct: 248 ELDPIVTRRYYYSIKDISVGGMCICYGHASSCPWDETTKKLQCQCEHNTCGESCNRCCPG 307
Query: 297 FSDRPWGRATVYDANECK 314
+ +PW TV N C+
Sbjct: 308 YHQQPWRPGTVSSGNTCE 325
Score = 58.2 bits (139), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 37/112 (33%), Positives = 47/112 (41%), Gaps = 19/112 (16%)
Query: 199 GGRCKCNGHASRC-IKSPQGELVCECRHNTAGKDCEKCKPFFSDRPWGRATVYDANECKG 257
GG C C GHAS C +L C+C HNT G+ C +C P + +PW TV N C+
Sbjct: 267 GGMCICYGHASSCPWDETTKKLQCQCEHNTCGESCNRCCPGYHQQPWRPGTVSSGNTCEA 326
Query: 258 GRCKCNGHASRCIKSPQ----------------GALVCECRHNTAGKDCEKC 293
C C+ A C G + C NT G +CE C
Sbjct: 327 --CNCHNKAKDCYYDESVAKQKKSLNTAGQFRGGGVCINCLQNTMGINCETC 376
Score = 38.5 bits (88), Expect = 0.071, Method: Compositional matrix adjust.
Identities = 30/93 (32%), Positives = 40/93 (43%), Gaps = 10/93 (10%)
Query: 221 CECRHNTAGKDCEKCKPFFSDRPWGRATVYDANECKGGRCKCNGHASRCIKSPQGALVCE 280
CEC G CE C + + + C+ C+C+GHA+ C + G +
Sbjct: 709 CECPQGYTGTSCESCLSGY----YRVDGILFGGICQ--PCECHGHAAEC--NVHGVCIA- 759
Query: 281 CRHNTAGKDCEKCKPFFSDRPWGRATVYDANEC 313
C HNT G CE+C P F P R T D C
Sbjct: 760 CAHNTTGVHCEQCLPGFYGEP-SRGTPGDCQPC 791
Score = 37.7 bits (86), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 35/108 (32%), Positives = 49/108 (45%), Gaps = 10/108 (9%)
Query: 202 CKCNGHASRCIKSPQGELVCECRHNTAGKDCEKCKPFFSDRPWGRATVYDANECK-GGRC 260
C+C+GHA+ C + G + C HNT G CE+C P F P R T D C
Sbjct: 742 CECHGHAAEC--NVHGVCIA-CAHNTTGVHCEQCLPGFYGEP-SRGTPGDCQPCACPLTI 797
Query: 261 KCNGHASRCIKSPQGALVCE-CRHNTAGKDCEKCKPFFSDRPWGRATV 307
N + C + +VC+ C +G CE+C +D +G TV
Sbjct: 798 ASNNFSPTCHLNDGDEVVCDWCAPGYSGAWCERC----ADGYYGNPTV 841
Score = 32.3 bits (72), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 22/72 (30%), Positives = 32/72 (44%), Gaps = 8/72 (11%)
Query: 222 ECRHNTAGKDCEKCKPFFSDRPWGRATVYDANECKGGRCKCNGHASRCIKSPQGALVCEC 281
+C NT G CE+C F +G A A C+ C G S G +C+C
Sbjct: 872 KCLGNTDGAHCERCADGF----YGDAVT--AKNCRACECHVKGSHSAVCHLETG--LCDC 923
Query: 282 RHNTAGKDCEKC 293
+ N G+ C++C
Sbjct: 924 KPNVTGQQCDQC 935
Score = 32.3 bits (72), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 22/77 (28%), Positives = 33/77 (42%), Gaps = 14/77 (18%)
Query: 221 CECRHNTAGKDCEKCKPFFSDRPWGRATVYDANECKGGRCKCNGHASRCIKSPQGALVCE 280
C C+ G+ C++C+ + D P + C CN S + G C
Sbjct: 427 CPCKEGYTGEKCDRCQLGYKDYPTCVS------------CGCNPVGSASDEPCTGP--CV 472
Query: 281 CRHNTAGKDCEKCKPFF 297
C+ N GK C++CKP F
Sbjct: 473 CKENVEGKACDRCKPGF 489
>sp|Q3UQ22|NET5_MOUSE Netrin-5 OS=Mus musculus GN=Ntn5 PE=2 SV=2
Length = 452
Score = 77.0 bits (188), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 57/195 (29%), Positives = 82/195 (42%), Gaps = 17/195 (8%)
Query: 117 NVTLTLSLGKKFELTYISLSFCPKSIKPDSLAIYKSQDFGKSWQPLQFYSSQCKKLYGRT 176
N +LTL L F LT ++L FC + P +L + + G W+PL + L G
Sbjct: 78 NSSLTLDLDGSFLLTSVTLRFC--TAGPPALVLSAAWATGGPWRPLWRRPAWPGALGGPK 135
Query: 177 ATGVISRGNEQEALCTDRHK-----KQG-------GRCKCNGHASRCIKSPQGELVCECR 224
S + + + K G GRC+C+GHA+RC Q C CR
Sbjct: 136 KVTFHSPPGPKTRIVASYLRVEFGGKAGLVTTGVRGRCQCHGHAARCATRAQPPR-CRCR 194
Query: 225 HNTAGKDCEKCKPFFSDRPWGRATVYDANECKGGRCKCNGHASRCIKSPQGALVCECRHN 284
H+T G CE C+P D PW AT + C C+C+ + Q + C C+
Sbjct: 195 HHTTGPGCESCRPSHRDWPWRPATPQHPHPCLP--CQCHPIGATGGMCNQTSGQCSCKLG 252
Query: 285 TAGKDCEKCKPFFSD 299
G C +C P +
Sbjct: 253 VTGLTCNRCGPGYQQ 267
>sp|Q01635|LAMB1_CHICK Laminin subunit beta-1 (Fragment) OS=Gallus gallus GN=LAMB1 PE=2
SV=1
Length = 303
Score = 77.0 bits (188), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 57/225 (25%), Positives = 103/225 (45%), Gaps = 36/225 (16%)
Query: 116 DNVTLTLSLGKKFELTYISLSFCPKSIKPDSLAIYKSQDFGKSWQPLQFYSSQCKKLYGR 175
+NVT+ L+L +F T++ ++F K+ +P ++ I +S DFGK+WQ ++++ C+ +
Sbjct: 51 ENVTIQLNLEAEFHFTHLIMTF--KTFRPAAMLIERSSDFGKTWQVYRYFAYDCESSFPG 108
Query: 176 TATGVISRGNEQEALCTDRHKKQGGRCKCNGHASRCIKSPQGEL---------------- 219
+TG + + ++ +C R+ + G + P +
Sbjct: 109 ISTGPMKKVDD--IICDSRYSDIEPSTE--GEVIYRVLDPAFRIEDPYSPRIQNLLKITN 164
Query: 220 --VCECRHNTAGKDCEKCKPFFSDRPWGRATVYDANECKGGRCKCNGHASRCI------K 271
V + +T G + + ++ + +YD G C C GHAS C +
Sbjct: 165 LRVKFTKLHTLGDNLLDSRMEIREKYY--YAIYDM--VVRGNCFCYGHASECAPVEGFSE 220
Query: 272 SPQGALV--CECRHNTAGKDCEKCKPFFSDRPWGRATVYDANECK 314
+G + C CRHNT G +CE+C F+ D PW A ++N CK
Sbjct: 221 EVEGMVHGHCMCRHNTKGLNCEQCLDFYHDLPWRPAEGRNSNACK 265
Score = 65.5 bits (158), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 39/105 (37%), Positives = 55/105 (52%), Gaps = 19/105 (18%)
Query: 200 GRCKCNGHASRCI------KSPQGELV--CECRHNTAGKDCEKCKPFFSDRPWGRATVYD 251
G C C GHAS C + +G + C CRHNT G +CE+C F+ D PW A +
Sbjct: 201 GNCFCYGHASECAPVEGFSEEVEGMVHGHCMCRHNTKGLNCEQCLDFYHDLPWRPAEGRN 260
Query: 252 ANECKGGRCKCNGHASRC---------IKSPQGALVCECRHNTAG 287
+N CK +C CNGH+++C + G + +C+HNT G
Sbjct: 261 SNACK--KCNCNGHSTQCHFDMAVYMATGNTSGGVCDDCQHNTGG 303
>sp|P24043|LAMA2_HUMAN Laminin subunit alpha-2 OS=Homo sapiens GN=LAMA2 PE=1 SV=4
Length = 3122
Score = 77.0 bits (188), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 85/319 (26%), Positives = 122/319 (38%), Gaps = 52/319 (16%)
Query: 35 RRCIPDFVNAAFGQEVKVNSVCGLESPERYCDT----------SGACHVCDAGS--PRGR 82
R P +N A + N+ CG + PE YC + C +C+ S P R
Sbjct: 37 RGLFPAVLNLASNALITTNATCGEKGPEMYCKLVEHVPGQPVRNPQCRICNQNSSNPNQR 96
Query: 83 FPAEYLTDLNNPSNVTCWRSEAQTSVNSLSASPDNVTLTLSLGKKFELTYISLSFCPKSI 142
P D N T W+S + + VT+TL L + F++ Y+ + S
Sbjct: 97 HPITNAIDGKN----TWWQSPSIKN----GIEYHYVTITLDLQQVFQIAYVIVK-AANSP 147
Query: 143 KPDSLAIYKSQDFG--KSWQPLQFYSSQCKKLYG-RTATGVISRGNEQEALCTDRHKK-- 197
+P + + +S D K WQ ++C LY TG S + E +CT + K
Sbjct: 148 RPGNWILERSLDDVEYKPWQYHAVTDTECLTLYNIYPRTGPPSYAKDDEVICTSFYSKIH 207
Query: 198 --QGGRCKC---NGHASRCIKSPQGELVCECRH----------------NTAGKDCEKCK 236
+ G NG S SP+ R+ A KD +
Sbjct: 208 PLENGEIHISLINGRPSADDPSPELLEFTSARYIRLRFQRIRTLNADLMMFAHKDPREID 267
Query: 237 PFFSDRPWGRATVYDANECKGGRCKCNGHASRCIKSP-QGALVCECRHNTAGKDCEKCKP 295
P + R + +V D + GG C C GHA C P CEC HNT G C++C P
Sbjct: 268 PIVTRRYY--YSVKDIS--VGGMCICYGHARACPLDPATNKSRCECEHNTCGDSCDQCCP 323
Query: 296 FFSDRPWGRATVYDANECK 314
F +PW T EC+
Sbjct: 324 GFHQKPWRAGTFLTKTECE 342
Score = 65.1 bits (157), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 45/127 (35%), Positives = 54/127 (42%), Gaps = 20/127 (15%)
Query: 199 GGRCKCNGHASRCIKSP-QGELVCECRHNTAGKDCEKCKPFFSDRPWGRATVYDANECKG 257
GG C C GHA C P + CEC HNT G C++C P F +PW T EC+
Sbjct: 284 GGMCICYGHARACPLDPATNKSRCECEHNTCGDSCDQCCPGFHQKPWRAGTFLTKTECEA 343
Query: 258 GRCKCNGHASRCI----------------KSPQGALVCECRHNTAGKDCEKCKPFFSDRP 301
C C+G A C K G + C NTAG +CE C F RP
Sbjct: 344 --CNCHGKAEECYYDENVARRNLSLNIRGKYIGGGVCINCTQNTAGINCETCTDGFF-RP 400
Query: 302 WGRATVY 308
G + Y
Sbjct: 401 KGVSPNY 407
Score = 45.8 bits (107), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 30/85 (35%), Positives = 44/85 (51%), Gaps = 9/85 (10%)
Query: 214 SPQGELV--CECRHNTAGKDCEKCKPFF---SDRPWGRATVYDANECKGGRCKCNGHASR 268
+P +L+ C+C +G CE C P F +P GR C C+CNGH+S
Sbjct: 1371 TPPADLIEKCDCPLGYSGLSCEACLPGFYRLRSQPGGRTPGPTLGTCV--PCQCNGHSSL 1428
Query: 269 CIKSPQGALVCECRHNTAGKDCEKC 293
C P+ ++ C+H+TAG CE+C
Sbjct: 1429 C--DPETSICQNCQHHTAGDFCERC 1451
Score = 39.3 bits (90), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 31/107 (28%), Positives = 48/107 (44%), Gaps = 16/107 (14%)
Query: 202 CKCNGHASRCIKSPQGELVCECRHNTAGKDCEKCKPFFSDRPWGRATVYDANECKGGRCK 261
C+CNGH+S C P+ + C+H+TAG CE+C + G N+C+ +C
Sbjct: 1420 CQCNGHSSLC--DPETSICQNCQHHTAGDFCERCALGYYGIVKGL-----PNDCQ--QCA 1470
Query: 262 C------NGHASRCIKSPQGALVCE-CRHNTAGKDCEKCKPFFSDRP 301
C N + C+ C C G+ CE+C P ++ P
Sbjct: 1471 CPLISSSNNFSPSCVAEGLDDYRCTACPRGYEGQYCERCAPGYTGSP 1517
Score = 38.9 bits (89), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 28/72 (38%), Positives = 35/72 (48%), Gaps = 8/72 (11%)
Query: 223 CRHNTAGKDCEKCKPFFSDRPWGRATVYDANECKGGRCKCNGHASRCIKSPQGALVCECR 282
C+ T G+ CE C +D +G A DA C+ RC G S S G CECR
Sbjct: 889 CKPGTTGRYCELC----ADGYFGDAV--DAKNCQPCRCNAGGSFSEVCHSQTGQ--CECR 940
Query: 283 HNTAGKDCEKCK 294
N G+ C+KCK
Sbjct: 941 ANVQGQRCDKCK 952
Score = 35.0 bits (79), Expect = 0.68, Method: Compositional matrix adjust.
Identities = 32/96 (33%), Positives = 41/96 (42%), Gaps = 18/96 (18%)
Query: 201 RCKCNGHASRCIKSPQGELVCECRHNTAGKDCEKCKPFFSDRPWGRATVYDANECKGGRC 260
RC G S S G+ CECR N G+ C+KCK G + A C C
Sbjct: 919 RCNAGGSFSEVCHSQTGQ--CECRANVQGQRCDKCKA-------GTFGLQSARGCV--PC 967
Query: 261 KCNGHASR---CIKSPQGALVCECRHNTAGKDCEKC 293
CN S+ C +S Q C C+ GK C++C
Sbjct: 968 NCNSFGSKSFDCEESGQ----CWCQPGVTGKKCDRC 999
Score = 33.5 bits (75), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 34/124 (27%), Positives = 51/124 (41%), Gaps = 19/124 (15%)
Query: 191 CTDRHKKQGGR--------CKCNGHASRCIKSPQGELVCECRHNTAGKDCEKCKPFFSDR 242
C RH++ G C+C GHA C GE + C+ +T G C+KC P F
Sbjct: 738 CWPRHRRVNGTIFGGICEPCQCFGHAESC-DDVTGECL-NCKDHTGGPYCDKCLPGF--- 792
Query: 243 PWGRATVYDANECKGGRCKC----NGHASRCIKSPQGALVCE-CRHNTAGKDCEKCKPFF 297
+G T + +C+ C N + C L+C+ C G CE+C +
Sbjct: 793 -YGEPTKGTSEDCQPCACPLNIPSNNFSPTCHLDRSLGLICDGCPVGYTGPRCERCAEGY 851
Query: 298 SDRP 301
+P
Sbjct: 852 FGQP 855
Score = 31.6 bits (70), Expect = 7.5, Method: Compositional matrix adjust.
Identities = 26/84 (30%), Positives = 32/84 (38%), Gaps = 12/84 (14%)
Query: 220 VCECRHNTAGKDCEKCKPFFSDRPWGRATVYDANECKG--GRCKCNGHASRCIKSPQGAL 277
VC+C G CE C W R + G C+C GHA C L
Sbjct: 723 VCQCPPGYTGSSCESC--------WPRHRRVNGTIFGGICEPCQCFGHAESCDDVTGECL 774
Query: 278 VCECRHNTAGKDCEKCKPFFSDRP 301
C+ +T G C+KC P F P
Sbjct: 775 --NCKDHTGGPYCDKCLPGFYGEP 796
>sp|Q8JHV6|LAMB4_DANRE Laminin subunit beta-4 OS=Danio rerio GN=lamb4 PE=2 SV=1
Length = 1827
Score = 74.3 bits (181), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 44/122 (36%), Positives = 61/122 (50%), Gaps = 22/122 (18%)
Query: 200 GRCKCNGHASRCI--KSPQGELV---------CECRHNTAGKDCEKCKPFFSDRPWGRAT 248
G C CNGHAS+CI +G+ C C+HNTAG +CE+C+ F+ D PW
Sbjct: 265 GSCFCNGHASQCIPVDGARGDTFTEPGMVHGRCVCQHNTAGYNCERCQDFYHDAPWRPGG 324
Query: 249 VYDANECKGGRCKCNGHASRC---------IKSPQGALVCECRHNTAGKDCEKCKPFFSD 299
D++ CK RC C+ H+ +C G + +CR+N G CE C PF+
Sbjct: 325 KADSDVCK--RCNCHSHSEKCHFELARYLATGGVSGGVCDDCRNNRIGPQCELCGPFYYQ 382
Query: 300 RP 301
P
Sbjct: 383 DP 384
Score = 62.0 bits (149), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 38/156 (24%), Positives = 74/156 (47%), Gaps = 23/156 (14%)
Query: 37 CIPDFVNAAFGQ--EVKVNSVCGLESPERYC-----DTSGACHVCDAGSPRGRFPAEYLT 89
C P+ + G+ ++ +S CGL P+ YC + C CD+ SP
Sbjct: 30 CYPNLGDLMVGRAAQLAASSTCGLYRPQNYCILGYLENERKCFTCDSRSP--------YN 81
Query: 90 DLNNPSN------VTCWRSEAQTSVNSLSASPDNVTLTLSLGKKFELTYISLSFCPKSIK 143
D +NPS+ +T ++ E + V++ L L F+ +++ L+F KS +
Sbjct: 82 DYHNPSSHRIENIITTFQPERKMKWWQSENGVHEVSIQLDLEAMFQFSHLILTF--KSFR 139
Query: 144 PDSLAIYKSQDFGKSWQPLQFYSSQCKKLYGRTATG 179
P S+ + +S+DFG++W+ ++++ C + + G
Sbjct: 140 PASMLVERSKDFGRTWKVFRYFAEDCANSFPGISEG 175
Score = 52.4 bits (124), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 28/68 (41%), Positives = 38/68 (55%), Gaps = 11/68 (16%)
Query: 258 GRCKCNGHASRCIKS--------PQGALV---CECRHNTAGKDCEKCKPFFSDRPWGRAT 306
G C CNGHAS+CI + +V C C+HNTAG +CE+C+ F+ D PW
Sbjct: 265 GSCFCNGHASQCIPVDGARGDTFTEPGMVHGRCVCQHNTAGYNCERCQDFYHDAPWRPGG 324
Query: 307 VYDANECK 314
D++ CK
Sbjct: 325 KADSDVCK 332
Score = 36.6 bits (83), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 37/113 (32%), Positives = 50/113 (44%), Gaps = 17/113 (15%)
Query: 201 RCKCNGHASRCIKSPQGELVCECRHNTAGKDCEKCKPFFSDRPWGRATVYDANECKGGRC 260
RC+CN A C P +CR ++AG++CE+C+ + P C+ C
Sbjct: 946 RCQCNRLADIC--DPITGDCLDCREHSAGRNCERCEEGYVGDPVS------GQPCEPCLC 997
Query: 261 -KCNG----HASRCIKSPQ-GALVCECRHNTAGKDCEKCKP-FFSD--RPWGR 304
NG A C K P+ GA CEC G C+ C P F+ D P GR
Sbjct: 998 PDLNGSGRFFAFSCNKDPRSGAPYCECLPGHTGPQCDSCSPGFYGDLRLPGGR 1050
>sp|P15800|LAMB2_RAT Laminin subunit beta-2 OS=Rattus norvegicus GN=Lamb2 PE=2 SV=1
Length = 1801
Score = 73.9 bits (180), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 47/119 (39%), Positives = 67/119 (56%), Gaps = 19/119 (15%)
Query: 200 GRCKCNGHASRCIKSP------QGEL--VCECRHNTAGKDCEKCKPFFSDRPWGRATVYD 251
G C C GHAS+C +P +G + C C+HNT G +CE+C+ F+ D PW A
Sbjct: 284 GNCFCYGHASQCAPAPGAPAHAEGMVHGACICKHNTRGLNCEQCQDFYQDLPWHPAEDGH 343
Query: 252 ANECKGGRCKCNGHASRC-----IKSPQGAL---VCE-CRHNTAGKDCEKCKPFFSDRP 301
+ C+ +C+CNGH+ C + G + VC+ C+HNTAG+ CE C+PFF P
Sbjct: 344 THACR--KCECNGHSHSCHFDMAVYLASGNVSGGVCDGCQHNTAGRHCELCRPFFYRDP 400
Score = 56.2 bits (134), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 35/126 (27%), Positives = 64/126 (50%), Gaps = 11/126 (8%)
Query: 50 VKVNSVCGLESPERYCDTSGA-----CHVCDAGSPRGRFPAEYLTDLNNPSNV-TCWRSE 103
+ +S CGL SP+ YC S C +CD+ P F A + + NV T + +
Sbjct: 65 LTASSTCGLHSPQPYCIVSHLQDEKKCFLCDSRRP---FSARDNPNSHRIQNVVTSFAPQ 121
Query: 104 AQTSVNSLSASPDNVTLTLSLGKKFELTYISLSFCPKSIKPDSLAIYKSQDFGKSWQPLQ 163
+T+ VT+ L L +F T++ ++F K+ +P ++ + +S DFG++W+ +
Sbjct: 122 RRTAWWQSENGVPMVTIQLDLEAEFHFTHLIMTF--KTFRPAAMLVERSADFGRTWRVYR 179
Query: 164 FYSSQC 169
++S C
Sbjct: 180 YFSYDC 185
Score = 48.1 bits (113), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 38/125 (30%), Positives = 56/125 (44%), Gaps = 26/125 (20%)
Query: 193 DRHKKQGGRCKCNGHASRC-----IKSPQGEL---VCE-CRHNTAGKDCEKCKPFFSDRP 243
D H +C+CNGH+ C + G + VC+ C+HNTAG+ CE C+PFF P
Sbjct: 341 DGHTHACRKCECNGHSHSCHFDMAVYLASGNVSGGVCDGCQHNTAGRHCELCRPFFYRDP 400
Query: 244 WGRATVYDANECK-----------GGRCKCNGHASRCIKSPQGALVCECRHNTAGKDCEK 292
+ D C+ GGRC + + S Q C C+ + G C++
Sbjct: 401 --TKDMRDPAACRPCDCDPMGSQDGGRCDSHDDPVLGLVSGQ----CRCKEHVVGTRCQQ 454
Query: 293 CKPFF 297
C+ F
Sbjct: 455 CRDGF 459
Score = 44.3 bits (103), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 36/65 (55%), Gaps = 8/65 (12%)
Query: 258 GRCKCNGHASRCIKSP------QGAL--VCECRHNTAGKDCEKCKPFFSDRPWGRATVYD 309
G C C GHAS+C +P +G + C C+HNT G +CE+C+ F+ D PW A
Sbjct: 284 GNCFCYGHASQCAPAPGAPAHAEGMVHGACICKHNTRGLNCEQCQDFYQDLPWHPAEDGH 343
Query: 310 ANECK 314
+ C+
Sbjct: 344 THACR 348
Score = 36.6 bits (83), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 29/88 (32%), Positives = 38/88 (43%), Gaps = 20/88 (22%)
Query: 218 ELVCECRHNTAGKDCEKCKP-FFSD--RPWGRATVYDANECKGG-----RCKCNGHASRC 269
++VC CR G CE C P F D +P GR + EC G C+ H +C
Sbjct: 954 QIVCHCRAGYTGLRCEACAPGHFGDPSKPGGRCQLC---ECSGNIDPTDPGACDPHTGQC 1010
Query: 270 IKSPQGALVCECRHNTAGKDCEKCKPFF 297
++ C H+T G C CKP F
Sbjct: 1011 LR---------CLHHTEGPHCGHCKPGF 1029
>sp|Q61292|LAMB2_MOUSE Laminin subunit beta-2 OS=Mus musculus GN=Lamb2 PE=2 SV=2
Length = 1799
Score = 73.2 bits (178), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 47/119 (39%), Positives = 66/119 (55%), Gaps = 19/119 (15%)
Query: 200 GRCKCNGHASRCIKSP------QGEL--VCECRHNTAGKDCEKCKPFFSDRPWGRATVYD 251
G C C GHAS+C +P +G + C C+HNT G +CE+C+ F+ D PW A
Sbjct: 284 GNCFCYGHASQCAPAPGAPAHAEGMVHGACICKHNTRGLNCEQCQDFYQDLPWHPAEDGH 343
Query: 252 ANECKGGRCKCNGHASRC-----IKSPQGAL---VCE-CRHNTAGKDCEKCKPFFSDRP 301
+ C+ +C+CNGH C + G + VC+ C+HNTAG+ CE C+PFF P
Sbjct: 344 THACR--KCECNGHTHSCHFDMAVYLASGNVSGGVCDGCQHNTAGRHCEFCRPFFYRDP 400
Score = 56.2 bits (134), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 35/126 (27%), Positives = 63/126 (50%), Gaps = 11/126 (8%)
Query: 50 VKVNSVCGLESPERYCDTSGA-----CHVCDAGSPRGRFPAEYLTDLNNPSNV-TCWRSE 103
+ +S CGL SP+ YC S C +CD+ P F A + + NV T + +
Sbjct: 65 LTASSTCGLHSPQPYCIVSHLQDEKKCFLCDSRRP---FSARDNPNSHRIQNVVTSFAPQ 121
Query: 104 AQTSVNSLSASPDNVTLTLSLGKKFELTYISLSFCPKSIKPDSLAIYKSQDFGKSWQPLQ 163
+T+ VT+ L L +F T++ ++F K+ +P ++ + +S DFG++W +
Sbjct: 122 RRTAWWQSENGVPMVTIQLDLEAEFHFTHLIMTF--KTFRPAAMLVERSADFGRTWHVYR 179
Query: 164 FYSSQC 169
++S C
Sbjct: 180 YFSYDC 185
Score = 47.0 bits (110), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 38/125 (30%), Positives = 55/125 (44%), Gaps = 26/125 (20%)
Query: 193 DRHKKQGGRCKCNGHASRC-----IKSPQGEL---VCE-CRHNTAGKDCEKCKPFFSDRP 243
D H +C+CNGH C + G + VC+ C+HNTAG+ CE C+PFF P
Sbjct: 341 DGHTHACRKCECNGHTHSCHFDMAVYLASGNVSGGVCDGCQHNTAGRHCEFCRPFFYRDP 400
Query: 244 WGRATVYDANECK-----------GGRCKCNGHASRCIKSPQGALVCECRHNTAGKDCEK 292
+ D C+ GGRC + + S Q C C+ + G C++
Sbjct: 401 --TKDMRDPAVCRPCDCDPMGSQDGGRCDSHDDPVLGLVSGQ----CRCKEHVVGTRCQQ 454
Query: 293 CKPFF 297
C+ F
Sbjct: 455 CRDGF 459
Score = 44.3 bits (103), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 36/65 (55%), Gaps = 8/65 (12%)
Query: 258 GRCKCNGHASRCIKSP------QGAL--VCECRHNTAGKDCEKCKPFFSDRPWGRATVYD 309
G C C GHAS+C +P +G + C C+HNT G +CE+C+ F+ D PW A
Sbjct: 284 GNCFCYGHASQCAPAPGAPAHAEGMVHGACICKHNTRGLNCEQCQDFYQDLPWHPAEDGH 343
Query: 310 ANECK 314
+ C+
Sbjct: 344 THACR 348
Score = 38.5 bits (88), Expect = 0.061, Method: Compositional matrix adjust.
Identities = 30/88 (34%), Positives = 39/88 (44%), Gaps = 20/88 (22%)
Query: 218 ELVCECRHNTAGKDCEKCKP-FFSD--RPWGRATVYDANECKGG-----RCKCNGHASRC 269
++VC+CR G CE C P F D +P GR + EC G C+ H +C
Sbjct: 952 QIVCQCREGYTGLRCEACAPGHFGDPSKPGGRCQLC---ECSGNIDPMDPDACDPHTGQC 1008
Query: 270 IKSPQGALVCECRHNTAGKDCEKCKPFF 297
++ C HNT G C CKP F
Sbjct: 1009 LR---------CLHNTEGPHCGYCKPGF 1027
Score = 31.6 bits (70), Expect = 9.0, Method: Compositional matrix adjust.
Identities = 35/111 (31%), Positives = 42/111 (37%), Gaps = 13/111 (11%)
Query: 202 CKCNGHASRCIKSPQGELVCECRHNTAGKDCEKCKPFFSDRPWGRATVYDAN----ECKG 257
C CNG A C L CR T G+ CE+C F P Y C
Sbjct: 878 CVCNGRADECDTHTGACL--GCRDYTGGEHCERCIAGFHGDP---RLPYGGQCRPCPCPE 932
Query: 258 GRCKCNGHASRCIKSPQG-ALVCECRHNTAGKDCEKCKP-FFSD--RPWGR 304
G A+ C + +VC+CR G CE C P F D +P GR
Sbjct: 933 GPGSQRHFATSCHRDGYSQQIVCQCREGYTGLRCEACAPGHFGDPSKPGGR 983
>sp|P55268|LAMB2_HUMAN Laminin subunit beta-2 OS=Homo sapiens GN=LAMB2 PE=1 SV=2
Length = 1798
Score = 71.2 bits (173), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 46/119 (38%), Positives = 66/119 (55%), Gaps = 19/119 (15%)
Query: 200 GRCKCNGHASRCIKSP------QGEL--VCECRHNTAGKDCEKCKPFFSDRPWGRATVYD 251
G C C GHAS C +P +G + C C+HNT G +CE+C+ F+ D PW A
Sbjct: 281 GNCFCYGHASECAPAPGAPAHAEGMVHGACICKHNTRGLNCEQCQDFYRDLPWRPAEDGH 340
Query: 252 ANECKGGRCKCNGHASRC-----IKSPQGAL---VCE-CRHNTAGKDCEKCKPFFSDRP 301
++ C+ +C+C+GH C + G + VC+ C+HNTAG+ CE C+PFF P
Sbjct: 341 SHACR--KCECHGHTHSCHFDMAVYLASGNVSGGVCDGCQHNTAGRHCELCRPFFYRDP 397
Score = 54.3 bits (129), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 34/132 (25%), Positives = 60/132 (45%), Gaps = 23/132 (17%)
Query: 50 VKVNSVCGLESPERYCDTSGA-----CHVCDA-------GSPRGRFPAEYLTDLNNPSNV 97
+ +S CGL P+ YC S C +CD+ +P +T
Sbjct: 62 LTASSTCGLNGPQPYCIVSHLQDEKKCFLCDSRRPFSARDNPHSHRIQNVVTSFAPQRRA 121
Query: 98 TCWRSEAQTSVNSLSASPDNVTLTLSLGKKFELTYISLSFCPKSIKPDSLAIYKSQDFGK 157
W+SE N + A VT+ L L +F T++ ++F K+ +P ++ + +S DFG+
Sbjct: 122 AWWQSE-----NGIPA----VTIQLDLEAEFHFTHLIMTF--KTFRPAAMLVERSADFGR 170
Query: 158 SWQPLQFYSSQC 169
+W +++S C
Sbjct: 171 TWHVYRYFSYDC 182
Score = 46.6 bits (109), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 37/125 (29%), Positives = 56/125 (44%), Gaps = 26/125 (20%)
Query: 193 DRHKKQGGRCKCNGHASRC-----IKSPQGEL---VCE-CRHNTAGKDCEKCKPFFSDRP 243
D H +C+C+GH C + G + VC+ C+HNTAG+ CE C+PFF P
Sbjct: 338 DGHSHACRKCECHGHTHSCHFDMAVYLASGNVSGGVCDGCQHNTAGRHCELCRPFFYRDP 397
Query: 244 WGRATVYDANECK-----------GGRCKCNGHASRCIKSPQGALVCECRHNTAGKDCEK 292
+ D C+ GGRC + + + S Q C C+ + G C++
Sbjct: 398 --TKDLRDPAVCRSCDCDPMGSQDGGRCDSHDDPALGLVSGQ----CRCKEHVVGTRCQQ 451
Query: 293 CKPFF 297
C+ F
Sbjct: 452 CRDGF 456
Score = 43.5 bits (101), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 36/65 (55%), Gaps = 8/65 (12%)
Query: 258 GRCKCNGHASRCIKSP------QGAL--VCECRHNTAGKDCEKCKPFFSDRPWGRATVYD 309
G C C GHAS C +P +G + C C+HNT G +CE+C+ F+ D PW A
Sbjct: 281 GNCFCYGHASECAPAPGAPAHAEGMVHGACICKHNTRGLNCEQCQDFYRDLPWRPAEDGH 340
Query: 310 ANECK 314
++ C+
Sbjct: 341 SHACR 345
Score = 38.1 bits (87), Expect = 0.086, Method: Compositional matrix adjust.
Identities = 30/88 (34%), Positives = 38/88 (43%), Gaps = 20/88 (22%)
Query: 218 ELVCECRHNTAGKDCEKCKP-FFSD--RPWGRATVYDANECKGG-----RCKCNGHASRC 269
++VC CR G CE C P F D RP GR + EC G C+ H +C
Sbjct: 951 QIVCHCRAGYTGLRCEACAPGHFGDPSRPGGRCQLC---ECSGNIDPMDPDACDPHTGQC 1007
Query: 270 IKSPQGALVCECRHNTAGKDCEKCKPFF 297
++ C H+T G C CKP F
Sbjct: 1008 LR---------CLHHTEGPHCAHCKPGF 1026
Score = 35.8 bits (81), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 37/111 (33%), Positives = 43/111 (38%), Gaps = 13/111 (11%)
Query: 202 CKCNGHASRCIKSPQGELVCECRHNTAGKDCEKCKPFFSDRPWGRATVYDAN----ECKG 257
C CNGHA C L CR +T G+ CE+C F P Y C
Sbjct: 877 CVCNGHADECNTHTGACL--GCRDHTGGEHCERCIAGFHGDP---RLPYGGQCRPCPCPE 931
Query: 258 GRCKCNGHASRCIKSPQG-ALVCECRHNTAGKDCEKCKP-FFSD--RPWGR 304
G A+ C + +VC CR G CE C P F D RP GR
Sbjct: 932 GPGSQRHFATSCHQDEYSQQIVCHCRAGYTGLRCEACAPGHFGDPSRPGGR 982
Score = 35.4 bits (80), Expect = 0.61, Method: Compositional matrix adjust.
Identities = 28/116 (24%), Positives = 53/116 (45%), Gaps = 11/116 (9%)
Query: 201 RCKCNGHASRCIKSP--QGELVCECRHNTAGKDCEKCKPFFSDRPWGRATVYDANECKGG 258
RC+CN + +P C C+ G+ C++C P WG + +D C+
Sbjct: 469 RCQCNARGTVPGSTPCDPNSGSCYCKRLVTGRGCDRCLPGH----WGLS--HDLLGCRP- 521
Query: 259 RCKCNGHASRCIKSPQGALVCECRHNTAGKDCEKCKPFFSDRPWGRATVYDANECK 314
C C+ + + +G C CR + G+ CE+ +P + RP+ +++A + +
Sbjct: 522 -CDCDVGGALDPQCDEGTGQCHCRQHMVGRRCEQVQPGYF-RPFLDHLIWEAEDTR 575
Score = 31.6 bits (70), Expect = 7.2, Method: Compositional matrix adjust.
Identities = 26/107 (24%), Positives = 46/107 (42%), Gaps = 13/107 (12%)
Query: 191 CTDRHKKQGGRCKCNGHASRCIKSPQGELVCECRHNTAGKDCEKCKPFFSDRPWGRATVY 250
C + GGRC + + + S Q C C+ + G C++C+ F ++
Sbjct: 412 CDPMGSQDGGRCDSHDDPALGLVSGQ----CRCKEHVVGTRCQQCRDGFFG-----LSIS 462
Query: 251 DANECKGGRCKCNGHASRCIKSP--QGALVCECRHNTAGKDCEKCKP 295
D C+ RC+CN + +P + C C+ G+ C++C P
Sbjct: 463 DRLGCR--RCQCNARGTVPGSTPCDPNSGSCYCKRLVTGRGCDRCLP 507
>sp|Q21313|EPI1_CAEEL Laminin-like protein epi-1 OS=Caenorhabditis elegans GN=epi-1 PE=1
SV=1
Length = 3672
Score = 67.0 bits (162), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 50/124 (40%), Positives = 61/124 (49%), Gaps = 22/124 (17%)
Query: 199 GGRCKCNGHASRC-IKSPQ--GELVCECRHNTAGKDCEKCKPFFSDRPWGRATVYDANEC 255
GGRC CNGHA C I PQ L+C C HNT G CE+C P F + W AT ++ C
Sbjct: 295 GGRCVCNGHAVTCDILEPQRPKSLLCRCEHNTCGDMCERCCPGFVQKQWQAATAHNNFTC 354
Query: 256 KGGRCKCNGHASRC------------IKSP---QGALVCE-CRHNTAGKDCEKCKPFFSD 299
+ C C G ++ C I S +G VC+ CR NT G +C KC F
Sbjct: 355 EA--CNCFGRSNECEYDAEVDLNKQSIDSQGNYEGGGVCKNCRENTEGVNCNKCS-FGYF 411
Query: 300 RPWG 303
RP G
Sbjct: 412 RPEG 415
Score = 66.6 bits (161), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 67/268 (25%), Positives = 108/268 (40%), Gaps = 35/268 (13%)
Query: 70 ACHVCDAGSPRGRFPAEYLTDLNNPSNVTCWRSEAQTSVNSLSASPDNVTLTLSLGKKFE 129
C C+AG+ PA + D NN + W S S + V +T+ L ++F
Sbjct: 100 GCGHCNAGNENSH-PAANMVDGNN----SWWMSPPL----SRGLQHNEVNITIDLEQEFH 150
Query: 130 LTYISLSFCPKSIKPDSLAIYKSQDFGKSWQPLQFY---SSQCKKLYGRTATGVISRG-- 184
+ Y+ + S +P S + +S D GK++QP + +++C + +G + IS
Sbjct: 151 VAYVWIQMA-NSPRPGSWVLERSTDHGKTYQPWFNFAENAAECMRRFGMESLSPISEDDS 209
Query: 185 --------------NEQEALCTDRHKKQGGRCKCNGHASRCIKSPQGELVCECRHNTAGK 230
N + + H+ + + ++ L G
Sbjct: 210 VTCRTDMASLQPLENAEMVIRILEHRPSSRQFATSEALQNFTRATNVRLRLLGTRTLQGH 269
Query: 231 DCEKCKPFFSDRPWGRATVYDANECK-GGRCKCNGHASRC-IKSPQ--GALVCECRHNTA 286
+ + + D R Y E GGRC CNGHA C I PQ +L+C C HNT
Sbjct: 270 LMDMNE--WRDPTVTRRYFYAIKEIMIGGRCVCNGHAVTCDILEPQRPKSLLCRCEHNTC 327
Query: 287 GKDCEKCKPFFSDRPWGRATVYDANECK 314
G CE+C P F + W AT ++ C+
Sbjct: 328 GDMCERCCPGFVQKQWQAATAHNNFTCE 355
Score = 46.2 bits (108), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 34/104 (32%), Positives = 47/104 (45%), Gaps = 10/104 (9%)
Query: 202 CKCNGHASRCIKSPQGELVCECRHNTAGKDCEKCKPFFSDRPWGRAT---VYDANECKGG 258
C+CNGH++ C P + +C HNT G CE C ++ +G AT YD C
Sbjct: 1830 CECNGHSATC--DPDTGICTDCEHNTNGDHCEFC----NEGHYGNATNGSPYDCMACACP 1883
Query: 259 RCKCNGHASRCIKSPQGALV-CECRHNTAGKDCEKCKPFFSDRP 301
N A C S +G L+ C C+ G C++C F P
Sbjct: 1884 FAPTNNFAKSCDVSEEGQLLQCNCKPGYTGDRCDRCASGFFGHP 1927
Score = 40.0 bits (92), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 27/87 (31%), Positives = 39/87 (44%), Gaps = 6/87 (6%)
Query: 211 CIKSPQGELVCECRHNTAGKDCEKCKPFFSDRPWGRATVYDANECKGGRCKCNGHASRCI 270
C K GEL C CR + G+ C++CKP F D + + + C+ C NG S
Sbjct: 715 CDKVSPGEL-CSCRKHVTGRICDQCKPTFWDLQY-----HHEDGCRSCDCNVNGTISGLN 768
Query: 271 KSPQGALVCECRHNTAGKDCEKCKPFF 297
C C+ N G+ C++C F
Sbjct: 769 TCDLKTGQCMCKKNADGRRCDQCADGF 795
Score = 38.9 bits (89), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 26/82 (31%), Positives = 36/82 (43%), Gaps = 8/82 (9%)
Query: 221 CECRHNTAGKDCEKCKPFFSDRPWGRATVYDANECKGGRCKCNGHASRCIKSPQGALVCE 280
C C+ N G+ C++CKP F + P EC C K G L C
Sbjct: 674 CYCKGNFEGERCDRCKPNFYNFPI-------CEECNCNPSGVTRDFQGCDKVSPGEL-CS 725
Query: 281 CRHNTAGKDCEKCKPFFSDRPW 302
CR + G+ C++CKP F D +
Sbjct: 726 CRKHVTGRICDQCKPTFWDLQY 747
Score = 38.1 bits (87), Expect = 0.081, Method: Compositional matrix adjust.
Identities = 31/103 (30%), Positives = 43/103 (41%), Gaps = 19/103 (18%)
Query: 202 CKCNGHASRCIKSPQGELV---CECRHNTAGKDCEKCKPFFSDRPWGRATVYDANECKGG 258
C C+G I SP+ + C C N G+ C+KC F + P R + KG
Sbjct: 610 CACDGAG---ITSPECDATSGQCPCNGNFTGRTCDKCAAGFYNYPDCRGCECLLSGAKGQ 666
Query: 259 RCKCNGHASRCIKSPQGALVCECRHNTAGKDCEKCKPFFSDRP 301
C NG C C+ N G+ C++CKP F + P
Sbjct: 667 TCDSNGQ-------------CYCKGNFEGERCDRCKPNFYNFP 696
Score = 36.6 bits (83), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 32/98 (32%), Positives = 45/98 (45%), Gaps = 15/98 (15%)
Query: 202 CKCNGHA----SRCIKSPQGELVCECRHNTAGKDCEKCKPFFSDRPWGRATVYDANECKG 257
C+CNG+ SR G+ C NT G+ CE C +F +G A A C
Sbjct: 1937 CQCNGNNNLTDSRSCHPNSGDCYL-CEQNTDGRHCESCAAWF----YGDAVT--AKNCSS 1989
Query: 258 GRCKCNGHASRCIKSPQGALVCECRHNTAGKDCEKCKP 295
C+C+ S+ + G CEC+ N G C++CKP
Sbjct: 1990 --CECSQCGSQYCDNKSGG--CECKINVEGDSCDRCKP 2023
Score = 32.0 bits (71), Expect = 5.8, Method: Compositional matrix adjust.
Identities = 27/97 (27%), Positives = 38/97 (39%), Gaps = 11/97 (11%)
Query: 205 NGHASRCIKSPQGELV-CECRHNTAGKDCEKCKPFFSDRPWGRATVYDANECKGGRCKCN 263
N A C S +G+L+ C C+ G C++C F P C C+CN
Sbjct: 1888 NNFAKSCDVSEEGQLLQCNCKPGYTGDRCDRCASGFFGHPQ-----ISGESCS--PCQCN 1940
Query: 264 GHASRCIK---SPQGALVCECRHNTAGKDCEKCKPFF 297
G+ + P C NT G+ CE C +F
Sbjct: 1941 GNNNLTDSRSCHPNSGDCYLCEQNTDGRHCESCAAWF 1977
Score = 31.6 bits (70), Expect = 8.5, Method: Compositional matrix adjust.
Identities = 23/75 (30%), Positives = 34/75 (45%), Gaps = 12/75 (16%)
Query: 221 CECRHNTAGKDCEKCKPFFSDRPWGRATVYDANECKGGRCKCNGHASRC-IKSPQGALVC 279
CEC+ N G C++CKP WG + C+G C ++C +++ Q C
Sbjct: 2007 CECKINVEGDSCDRCKP----DHWGFSK---CQGCQGCHCGTAAFNTQCNVENGQ----C 2055
Query: 280 ECRHNTAGKDCEKCK 294
CR G CE C+
Sbjct: 2056 TCRPGATGMRCEHCE 2070
>sp|Q2QI47|USH2A_MOUSE Usherin OS=Mus musculus GN=Ush2A PE=1 SV=2
Length = 5193
Score = 63.5 bits (153), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 40/117 (34%), Positives = 61/117 (52%), Gaps = 16/117 (13%)
Query: 200 GRCKCNGHASRCIKSPQG-ELVCECRHNTAGKDCEKCKPFFSDRPWGRATVYDANECKGG 258
GRC+C+GHA C ++ + +C T G C++C P ++D+P+ +A CK
Sbjct: 513 GRCQCHGHAETCDRTRRPYRCLCSPHSFTEGPQCDRCSPLYNDKPFRSGDNVNAFNCK-- 570
Query: 259 RCKCNGHASRCIKSPQ-----------GALVC-ECRHNTAGKDCEKCKPFFSDRPWG 303
C+C+GHAS C G VC +C+H+T G+ CE C+ +F RP G
Sbjct: 571 PCQCHGHASSCHYDASVDPFPLEHNRGGGGVCDDCQHHTTGRHCESCQDYFY-RPVG 626
Score = 48.9 bits (115), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 57/276 (20%), Positives = 109/276 (39%), Gaps = 37/276 (13%)
Query: 60 SPERYCDTSGACHVCDAGSPRGRFPAEYLTDLNNPSNVTCWRSEAQTSVNSLSASPDNVT 119
S ++YC +GA + R A L+ +N+ T W S T++ L + V
Sbjct: 311 SVQQYCIPNGAGDTPEHRMSRLNPEAHPLSFINDDDVATSWISHVFTNITQLY---EGVA 367
Query: 120 LTLSL-GKKFELTYISLSFCPKSIKPDSLAIYKSQDFGKSWQPLQFYSSQCKKLYGRTAT 178
+++ L ++++ + F S++P ++ I + + W+ Q+++ C +
Sbjct: 368 ISIDLENGQYQVLKVITQF--SSLQPVAIRIQRKKADSSPWEDWQYFARNCSVWGMKDNE 425
Query: 179 GV----------------ISRGNEQEALCTDRHKKQGGRCKCNGHA--SRCIKSPQGELV 220
+ S GN L T K + G + +++ Q L
Sbjct: 426 DLENPNSVNCLQLPDFIPFSHGNVTFDLLTSGQKHRPGYNDFYNSSVLQEFMRATQIRLH 485
Query: 221 CECRHNTAGKDCEKCKPFFSDRPWGRATVYDANEC-KGGRCKCNGHASRCIKSPQGAL-V 278
++ AG + W R Y +E GRC+C+GHA C ++ + +
Sbjct: 486 FHGQYYPAGHTVD----------W-RHQYYAVDEIIVSGRCQCHGHAETCDRTRRPYRCL 534
Query: 279 CECRHNTAGKDCEKCKPFFSDRPWGRATVYDANECK 314
C T G C++C P ++D+P+ +A CK
Sbjct: 535 CSPHSFTEGPQCDRCSPLYNDKPFRSGDNVNAFNCK 570
Score = 42.7 bits (99), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 37/113 (32%), Positives = 53/113 (46%), Gaps = 20/113 (17%)
Query: 202 CKCNGHASRCIKSPQ-----------GELVCE-CRHNTAGKDCEKCKPFFSDRPWGRATV 249
C+C+GHAS C G VC+ C+H+T G+ CE C+ +F RP G A
Sbjct: 572 CQCHGHASSCHYDASVDPFPLEHNRGGGGVCDDCQHHTTGRHCESCQDYFY-RPVG-ADP 629
Query: 250 YDANECKGGRCKCNGHASRCIK---SPQGALVCECRHNTAGKDCEKCKPFFSD 299
+ CK C CN +R P G C+C+ +G+ C +C+ F D
Sbjct: 630 AAPDACK--LCDCNRAGTRNGSLHCDPIGGQ-CDCKRRVSGRQCLQCQDGFYD 679
Score = 32.3 bits (72), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 19/73 (26%), Positives = 31/73 (42%), Gaps = 5/73 (6%)
Query: 221 CECRHNTAGKDCEKCKPFFSDRPWGRATVYDANECKGGRCKCNGHASRCIKSPQGALVCE 280
C+C+ +G+ C +C+ F D D + C+ C +G I Q + C
Sbjct: 659 CDCKRRVSGRQCLQCQDGFYD-----LQALDPDGCRPCNCNPSGTVDGDITCHQNSGQCS 713
Query: 281 CRHNTAGKDCEKC 293
C+ N G C +C
Sbjct: 714 CKANVIGLRCNRC 726
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.320 0.135 0.451
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 123,725,653
Number of Sequences: 539616
Number of extensions: 5282530
Number of successful extensions: 11747
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 56
Number of HSP's successfully gapped in prelim test: 200
Number of HSP's that attempted gapping in prelim test: 9666
Number of HSP's gapped (non-prelim): 1380
length of query: 314
length of database: 191,569,459
effective HSP length: 117
effective length of query: 197
effective length of database: 128,434,387
effective search space: 25301574239
effective search space used: 25301574239
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 61 (28.1 bits)