Your job contains 1 sequence.
>psy6778
MHFLKLLCVPLLIGAVCGEKIDLNSDPCYENGRPRRCIPDFVNAAFGQEVKVNSVCGLES
PERYCDTSGACHVCDAGSPRGRFPAEYLTDLNNPSNVTCWRSEAQTSVNSLSASPDNVTL
TLSLGKKFELTYISLSFCPKSIKPDSLAIYKSQDFGKSWQPLQFYSSQCKKLYGRTATGV
ISRGNEQEALCTDRHKKQGGRCKCNGHASRCIKSPQGELVCECRHNTAGKDCEKCKPFFS
DRPWGRATVYDANECKGGRCKCNGHASRCIKSPQGALVCECRHNTAGKDCEKCKPFFSDR
PWGRATVYDANECK
The BLAST search returned 18 gene products which did not match your query constraints. Please see the full BLAST report below for the details.
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= psy6778
(314 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
ZFIN|ZDB-GENE-990415-169 - symbol:ntn1a "netrin 1a" speci... 540 9.2e-86 2
ZFIN|ZDB-GENE-990415-168 - symbol:ntn1b "netrin 1b" speci... 527 5.7e-84 2
UNIPROTKB|F1PSP7 - symbol:NTN1 "Uncharacterized protein" ... 526 8.3e-83 2
UNIPROTKB|O95631 - symbol:NTN1 "Netrin-1" species:9606 "H... 525 1.1e-82 2
RGD|619809 - symbol:Ntn1 "netrin 1" species:10116 "Rattus... 522 1.1e-82 2
UNIPROTKB|F1LPC8 - symbol:Ntn1 "Netrin-1" species:10116 "... 522 1.1e-82 2
MGI|MGI:105088 - symbol:Ntn1 "netrin 1" species:10090 "Mu... 522 1.1e-82 2
ZFIN|ZDB-GENE-050310-2 - symbol:ntn2 "netrin 2" species:7... 518 1.1e-82 2
FB|FBgn0015773 - symbol:NetA "Netrin-A" species:7227 "Dro... 495 5.3e-81 2
FB|FBgn0015774 - symbol:NetB "Netrin-B" species:7227 "Dro... 563 2.8e-78 2
WB|WBGene00006746 - symbol:unc-6 species:6239 "Caenorhabd... 456 6.6e-77 2
UNIPROTKB|P34710 - symbol:unc-6 "Netrin unc-6" species:62... 456 6.6e-77 2
UNIPROTKB|Q90922 - symbol:NTN1 "Netrin-1" species:9031 "G... 720 3.7e-71 1
UNIPROTKB|Q2HXW4 - symbol:NTN1 "Netrin-1" species:9823 "S... 717 7.7e-71 1
UNIPROTKB|F1N0C7 - symbol:NTN1 "Uncharacterized protein" ... 717 7.7e-71 1
UNIPROTKB|F1SS89 - symbol:NTN1 "Netrin-1" species:9823 "S... 717 7.7e-71 1
UNIPROTKB|Q90923 - symbol:NTN3 "Netrin-3" species:9031 "G... 372 4.5e-66 2
MGI|MGI:99914 - symbol:Lamc1 "laminin, gamma 1" species:1... 355 1.7e-58 2
UNIPROTKB|F1N0T1 - symbol:Bt.54919 "Uncharacterized prote... 317 4.3e-55 2
MGI|MGI:1344394 - symbol:Lamc3 "laminin gamma 3" species:... 318 6.9e-55 2
WB|WBGene00016913 - symbol:lam-2 species:6239 "Caenorhabd... 387 2.7e-53 2
UNIPROTKB|G3N0E7 - symbol:NTN3 "Uncharacterized protein" ... 463 1.9e-52 2
UNIPROTKB|E2R3Q6 - symbol:NTN3 "Uncharacterized protein" ... 457 3.0e-52 2
UNIPROTKB|O00634 - symbol:NTN3 "Netrin-3" species:9606 "H... 332 3.8e-52 2
UNIPROTKB|F1MD77 - symbol:LAMC1 "Uncharacterized protein"... 550 1.0e-51 1
UNIPROTKB|F1MAA7 - symbol:Lamc1 "Protein Lamc1" species:1... 548 1.6e-51 1
UNIPROTKB|F1SUI0 - symbol:NTN3 "Uncharacterized protein" ... 449 3.4e-51 2
ZFIN|ZDB-GENE-021226-3 - symbol:lamc1 "laminin, gamma 1" ... 544 4.3e-51 1
UNIPROTKB|P11047 - symbol:LAMC1 "Laminin subunit gamma-1"... 544 4.3e-51 1
UNIPROTKB|F1S663 - symbol:LAMC1 "Uncharacterized protein"... 539 1.5e-50 1
UNIPROTKB|F1NK49 - symbol:LAMC1 "Uncharacterized protein"... 535 4.0e-50 1
RGD|1309399 - symbol:Lamc3 "laminin gamma 3" species:1011... 529 1.7e-49 1
MGI|MGI:1341188 - symbol:Ntn3 "netrin 3" species:10090 "M... 435 2.5e-49 2
RGD|619811 - symbol:Ntn3 "netrin 3" species:10116 "Rattus... 511 5.2e-49 1
UNIPROTKB|G3V6X3 - symbol:Ntn3 "Netrin 2-like (Chicken)" ... 436 5.3e-49 2
UNIPROTKB|F1NCH8 - symbol:F1NCH8 "Uncharacterized protein... 514 5.6e-48 1
UNIPROTKB|F1S0X0 - symbol:LAMC3 "Uncharacterized protein"... 507 3.7e-47 1
UNIPROTKB|Q9Y6N6 - symbol:LAMC3 "Laminin subunit gamma-3"... 493 1.1e-45 1
UNIPROTKB|Q96CW9 - symbol:NTNG2 "Netrin-G2" species:9606 ... 226 5.0e-34 2
UNIPROTKB|Q13751 - symbol:LAMB3 "Laminin subunit beta-3" ... 256 2.0e-33 2
UNIPROTKB|F1PFM5 - symbol:LAMB3 "Uncharacterized protein"... 251 2.6e-33 2
MGI|MGI:1934028 - symbol:Ntng1 "netrin G1" species:10090 ... 229 3.6e-33 2
UNIPROTKB|F1NLU4 - symbol:LAMB3 "Uncharacterized protein"... 240 5.4e-33 2
UNIPROTKB|F1PHK9 - symbol:LAMC1 "Uncharacterized protein"... 373 6.5e-33 1
UNIPROTKB|Q9Y2I2 - symbol:NTNG1 "Netrin-G1" species:9606 ... 228 8.2e-33 2
UNIPROTKB|F1LYF9 - symbol:Ntng1 "Protein Ntng1" species:1... 230 1.5e-32 2
UNIPROTKB|F1SAE9 - symbol:LAMB1 "Uncharacterized protein"... 239 1.7e-32 2
MGI|MGI:1888978 - symbol:Ntn4 "netrin 4" species:10090 "M... 235 2.8e-32 2
UNIPROTKB|F1LWK9 - symbol:Ntng1 "Protein Ntng1" species:1... 230 3.2e-32 2
MGI|MGI:96743 - symbol:Lamb1 "laminin B1" species:10090 "... 234 4.3e-32 2
UNIPROTKB|F1MNT4 - symbol:LAMB1 "Uncharacterized protein"... 233 4.4e-32 2
RGD|1306311 - symbol:Lamb1 "laminin, beta 1" species:1011... 234 5.8e-32 2
ZFIN|ZDB-GENE-021226-1 - symbol:lamb1a "laminin, beta 1a"... 239 1.4e-31 2
ZFIN|ZDB-GENE-030131-9823 - symbol:lama5 "laminin, alpha ... 243 2.2e-31 2
UNIPROTKB|F1S575 - symbol:NTNG2 "Uncharacterized protein"... 228 2.4e-31 2
UNIPROTKB|P07942 - symbol:LAMB1 "Laminin subunit beta-1" ... 229 1.0e-30 2
UNIPROTKB|E1BWU4 - symbol:E1BWU4 "Uncharacterized protein... 222 1.7e-30 2
UNIPROTKB|E2QZY0 - symbol:NTN4 "Uncharacterized protein" ... 228 2.5e-30 2
UNIPROTKB|Q9HB63 - symbol:NTN4 "Netrin-4" species:9606 "H... 230 2.7e-30 2
UNIPROTKB|O15230 - symbol:LAMA5 "Laminin subunit alpha-5"... 243 5.1e-30 2
ZFIN|ZDB-GENE-081030-4 - symbol:lamb2 "laminin, beta 2 (l... 232 5.4e-30 2
UNIPROTKB|F1SQR3 - symbol:NTN4 "Uncharacterized protein" ... 227 5.6e-30 2
RGD|2988 - symbol:Lamb2 "laminin, beta 2" species:10116 "... 232 1.8e-29 2
MGI|MGI:2159341 - symbol:Ntng2 "netrin G2" species:10090 ... 190 1.9e-29 3
UNIPROTKB|F1NEW2 - symbol:NTN1 "Netrin-1" species:9031 "G... 325 2.7e-29 1
UNIPROTKB|F1NK85 - symbol:NTN1 "Netrin-1" species:9031 "G... 325 2.7e-29 1
UNIPROTKB|F1MAN8 - symbol:Lama5 "Protein Lama5" species:1... 241 2.8e-29 2
UNIPROTKB|E1BDK6 - symbol:LAMB2 "Uncharacterized protein"... 237 4.8e-29 2
UNIPROTKB|E1C700 - symbol:LAMB2 "Uncharacterized protein"... 214 5.7e-29 2
UNIPROTKB|A4D0S4 - symbol:LAMB4 "Laminin subunit beta-4" ... 246 9.2e-29 2
ZFIN|ZDB-GENE-050310-1 - symbol:ntn4 "netrin 4" species:7... 220 9.7e-29 2
FB|FBgn0261800 - symbol:LanB1 "LanB1" species:7227 "Droso... 225 1.3e-28 2
FB|FBgn0002528 - symbol:LanB2 "Laminin B2" species:7227 "... 333 1.4e-28 1
MGI|MGI:99916 - symbol:Lamb2 "laminin, beta 2" species:10... 230 1.5e-28 2
MGI|MGI:105382 - symbol:Lama5 "laminin, alpha 5" species:... 239 1.5e-28 2
UNIPROTKB|F1P486 - symbol:LOC416036 "Uncharacterized prot... 227 1.9e-28 2
UNIPROTKB|F1NJ23 - symbol:LAMB1 "Laminin subunit beta-1" ... 240 2.0e-28 2
UNIPROTKB|F1SPT5 - symbol:LAMB2 "Uncharacterized protein"... 234 2.1e-28 2
UNIPROTKB|F1MDD5 - symbol:Bt.12589 "Uncharacterized prote... 236 2.3e-28 2
UNIPROTKB|E2R4J1 - symbol:LAMB2 "Uncharacterized protein"... 232 2.6e-28 2
UNIPROTKB|E2RPP1 - symbol:LAMA3 "Uncharacterized protein"... 236 8.3e-28 2
UNIPROTKB|F1MC13 - symbol:LAMA5 "Uncharacterized protein"... 237 1.6e-27 2
WB|WBGene00002248 - symbol:lam-3 species:6239 "Caenorhabd... 227 1.7e-27 2
UNIPROTKB|F1LX88 - symbol:Ntng1 "Protein Ntng1" species:1... 206 1.9e-27 2
UNIPROTKB|F1LU77 - symbol:F1LU77 "Uncharacterized protein... 231 2.4e-27 2
UNIPROTKB|F1NI05 - symbol:LAMC1 "Uncharacterized protein"... 316 4.2e-27 1
UNIPROTKB|Q16787 - symbol:LAMA3 "Laminin subunit alpha-3"... 229 5.7e-27 2
UNIPROTKB|F1P4B9 - symbol:NTN4 "Uncharacterized protein" ... 214 1.7e-26 2
UNIPROTKB|F1NZZ2 - symbol:LAMA5 "Uncharacterized protein"... 237 1.8e-26 2
ZFIN|ZDB-GENE-021226-2 - symbol:lamb4 "laminin, beta 4" s... 215 4.7e-26 2
UNIPROTKB|P55268 - symbol:LAMB2 "Laminin subunit beta-2" ... 225 1.4e-25 2
UNIPROTKB|F1MF28 - symbol:NTN5 "Uncharacterized protein" ... 247 1.5e-25 2
UNIPROTKB|F1RIQ1 - symbol:NTN5 "Uncharacterized protein" ... 255 1.7e-25 2
MGI|MGI:99915 - symbol:Lamb3 "laminin, beta 3" species:10... 299 3.5e-25 1
UNIPROTKB|F1NQ51 - symbol:LAMA3 "Uncharacterized protein"... 223 4.1e-25 2
MGI|MGI:99909 - symbol:Lama3 "laminin, alpha 3" species:1... 226 8.9e-25 2
RGD|1307089 - symbol:Ntng2 "netrin G2" species:10116 "Rat... 195 1.1e-24 2
FB|FBgn0002526 - symbol:LanA "Laminin A" species:7227 "Dr... 210 1.2e-23 2
UNIPROTKB|F1LPI5 - symbol:Lamb3 "Protein Lamb3" species:1... 283 1.8e-23 1
UNIPROTKB|Q01635 - symbol:LAMB1 "Laminin subunit beta-1" ... 187 5.1e-23 2
WARNING: Descriptions of 96 database sequences were not reported due to the
limiting value of parameter V = 100.
>ZFIN|ZDB-GENE-990415-169 [details] [associations]
symbol:ntn1a "netrin 1a" species:7955 "Danio rerio"
[GO:0033564 "anterior/posterior axon guidance" evidence=IMP]
[GO:0048665 "neuron fate specification" evidence=IMP] [GO:0016525
"negative regulation of angiogenesis" evidence=IMP] [GO:0001569
"patterning of blood vessels" evidence=IMP] [GO:0005576
"extracellular region" evidence=IEA] [GO:0001525 "angiogenesis"
evidence=IMP] [GO:0016358 "dendrite development" evidence=IGI]
InterPro:IPR001134 PROSITE:PS50189 ZFIN:ZDB-GENE-990415-169
GO:GO:0005576 GO:GO:0016358 GO:GO:0001569 GO:GO:0016525
InterPro:IPR002049 InterPro:IPR008993 Pfam:PF00053 SMART:SM00180
SUPFAM:SSF50242 PROSITE:PS01248 PROSITE:PS50027 GO:GO:0048665
InterPro:IPR018933 Pfam:PF01759 HSSP:P02468 SMART:SM00643
InterPro:IPR008211 Pfam:PF00055 SMART:SM00136 PROSITE:PS51117
GeneTree:ENSGT00690000102103 HOVERGEN:HBG006464 KO:K06843
HOGENOM:HOG000286017 OMA:NCHTCDA GO:GO:0033564 EMBL:BX255899
EMBL:AF002717 EMBL:CU638812 IPI:IPI00500311 RefSeq:NP_571104.1
UniGene:Dr.545 STRING:O42140 Ensembl:ENSDART00000027806
Ensembl:ENSDART00000148565 GeneID:30227 KEGG:dre:30227 CTD:30227
InParanoid:O42140 NextBio:20806684 Uniprot:O42140
Length = 603
Score = 540 (195.1 bits), Expect = 9.2e-86, Sum P(2) = 9.2e-86
Identities = 102/178 (57%), Positives = 128/178 (71%)
Query: 26 DPCY-ENGRPRRCIPDFVNAAFGQEVKVNSVCGLESPERYC-------DTSGACHVCDAG 77
DPCY ENG PRRCIPDFVNAAFG+EV+ +S CG ++P RYC + CH CDA
Sbjct: 38 DPCYDENGHPRRCIPDFVNAAFGKEVRASSTCG-KTPSRYCVVTEKGDERHRNCHTCDAS 96
Query: 78 SPRGRFPAEYLTDLNNPSNVTCWRSEAQTSVNSLSASPDNVTLTLSLGKKFELTYISLSF 137
P+ P YLTDLNNP N+TCW+S+ N L P NVTLTLSLGKKFE+TY+SL F
Sbjct: 97 DPKKNHPPAYLTDLNNPHNLTCWQSD-----NYLQY-PQNVTLTLSLGKKFEVTYVSLQF 150
Query: 138 CPKSIKPDSLAIYKSQDFGKSWQPLQFYSSQCKKLYGRTATGVISRGNEQEALCTDRH 195
C S +P+S+AI+KS D+GKSW P Q+YS+QC+K+Y + + I++ NEQEA+CTD H
Sbjct: 151 C--SPRPESMAIFKSMDYGKSWVPFQYYSTQCRKMYNKPSKATITKQNEQEAICTDSH 206
Score = 337 (123.7 bits), Expect = 9.2e-86, Sum P(2) = 9.2e-86
Identities = 64/127 (50%), Positives = 77/127 (60%)
Query: 199 GGRCKCNGHASRCIKSPQGELVCECRHNTAGKDCEKCKPFFSDRPWGRATVYDANECKGG 258
GGRCKCNGHASRC+K G LVCEC+HNTAG +C++CKPF DRPW RAT +ANEC
Sbjct: 281 GGRCKCNGHASRCVKDRDGNLVCECKHNTAGPECDRCKPFHYDRPWQRATAREANECVA- 339
Query: 259 RCKCNGHASRC--------IKSPQGALVC-ECRHNTAGKDCEKCKP-FFSD--RPWGRAT 306
C CN HA RC + + VC CRHNTAG+ C CK ++ D +P
Sbjct: 340 -CNCNLHARRCRFNMELYKLSGRKSGGVCLNCRHNTAGRHCHYCKEGYYRDMSKPISHRK 398
Query: 307 VYDANEC 313
A +C
Sbjct: 399 ACKACDC 405
Score = 121 (47.7 bits), Expect = 5.4e-63, Sum P(2) = 5.4e-63
Identities = 33/112 (29%), Positives = 43/112 (38%)
Query: 192 TDRHKKQGGRCKCNGHASRC--------IKSPQGELVC-ECRHNTAGKDCEKCKP-FFSD 241
T R + C CN HA RC + + VC CRHNTAG+ C CK ++ D
Sbjct: 330 TAREANECVACNCNLHARRCRFNMELYKLSGRKSGGVCLNCRHNTAGRHCHYCKEGYYRD 389
Query: 242 RPWGRATVYDANECKGGRCKCNGHASRCIKSPQGALVCECRHNTAGKDCEKC 293
+ CK C G A + G C C+ G C +C
Sbjct: 390 MS---KPISHRKACKACDCHPVGAAGKTCNQTTGQ--CPCKDGVTGITCNRC 436
Score = 66 (28.3 bits), Expect = 3.3e-57, Sum P(2) = 3.3e-57
Identities = 30/119 (25%), Positives = 41/119 (34%)
Query: 184 GNEQEALCTD-RHKKQGGRCK-CN-GH---ASRCIKSPQGELVCECRH-NTAGKDCEKCK 236
G + +C + RH G C C G+ S+ I + C+C AGK C +
Sbjct: 360 GRKSGGVCLNCRHNTAGRHCHYCKEGYYRDMSKPISHRKACKACDCHPVGAAGKTCNQTT 419
Query: 237 PFFSDRPWGRATVYDANECKGGRCKCNGHASRCIKSPQGALVCECRHNTAGKDCEK-CK 294
+ G T N C G + + CIK P DCE CK
Sbjct: 420 GQCPCKD-G-VTGITCNRCANGYQQSRSPIAPCIKIPIAPPTTTASSTEEPSDCESYCK 476
>ZFIN|ZDB-GENE-990415-168 [details] [associations]
symbol:ntn1b "netrin 1b" species:7955 "Danio rerio"
[GO:0005576 "extracellular region" evidence=IEA] [GO:0016358
"dendrite development" evidence=IGI] InterPro:IPR001134
PROSITE:PS50189 ZFIN:ZDB-GENE-990415-168 GO:GO:0005576
GO:GO:0016358 GO:GO:2001240 InterPro:IPR002049 InterPro:IPR008993
Pfam:PF00053 SMART:SM00180 SUPFAM:SSF50242 PROSITE:PS01248
PROSITE:PS50027 InterPro:IPR018933 Pfam:PF01759 HSSP:P02468
SMART:SM00643 InterPro:IPR008211 Pfam:PF00055 SMART:SM00136
PROSITE:PS51117 HOVERGEN:HBG006464 KO:K06843 EMBL:AF017420
IPI:IPI00512636 RefSeq:NP_571073.1 UniGene:Dr.75773
ProteinModelPortal:O42203 STRING:O42203 PRIDE:O42203 GeneID:30192
KEGG:dre:30192 CTD:30192 InParanoid:O42203 NextBio:20806657
ArrayExpress:O42203 Bgee:O42203 Uniprot:O42203
Length = 602
Score = 527 (190.6 bits), Expect = 5.7e-84, Sum P(2) = 5.7e-84
Identities = 100/178 (56%), Positives = 126/178 (70%)
Query: 26 DPCY-ENGRPRRCIPDFVNAAFGQEVKVNSVCGLESPERYC-------DTSGACHVCDAG 77
DPCY ENG PRRCIPDFVN+AFG++V+V+S CG P R C + S C++CDA
Sbjct: 38 DPCYDENGNPRRCIPDFVNSAFGKDVRVSSTCG-SPPSRCCRVTEKGEERSRDCNICDAT 96
Query: 78 SPRGRFPAEYLTDLNNPSNVTCWRSEAQTSVNSLSASPDNVTLTLSLGKKFELTYISLSF 137
P+ P YLTDLNNP N+TCW+SE P NVTLTLSLGKKFE+TY+SL F
Sbjct: 97 DPKKTHPPAYLTDLNNPHNLTCWQSENYVQY------PQNVTLTLSLGKKFEVTYVSLQF 150
Query: 138 CPKSIKPDSLAIYKSQDFGKSWQPLQFYSSQCKKLYGRTATGVISRGNEQEALCTDRH 195
C S +P+S+AI+KS D+GK+W P QFYS+QCKK+Y + + I++ NEQEA+CTD H
Sbjct: 151 C--SPRPESMAIFKSMDYGKTWVPFQFYSTQCKKMYNKPSKAAITKQNEQEAICTDSH 206
Score = 333 (122.3 bits), Expect = 5.7e-84, Sum P(2) = 5.7e-84
Identities = 60/111 (54%), Positives = 73/111 (65%)
Query: 199 GGRCKCNGHASRCIKSPQGELVCECRHNTAGKDCEKCKPFFSDRPWGRATVYDANECKGG 258
GGRCKCNGHAS+C+K +G LVCEC+HNTAG +C++CKPF DRPW RAT +ANEC
Sbjct: 281 GGRCKCNGHASKCVKDREGNLVCECKHNTAGPECDRCKPFHYDRPWQRATAREANECVA- 339
Query: 259 RCKCNGHASRC--------IKSPQGALVC-ECRHNTAGKDCEKCKP-FFSD 299
C CN HA RC + + VC CRHNTAG+ C CK ++ D
Sbjct: 340 -CHCNLHARRCRFNMELYKLSGRRSGGVCLNCRHNTAGRHCHYCKEGYYRD 389
Score = 256 (95.2 bits), Expect = 7.5e-76, Sum P(2) = 7.5e-76
Identities = 40/57 (70%), Positives = 48/57 (84%)
Query: 257 GGRCKCNGHASRCIKSPQGALVCECRHNTAGKDCEKCKPFFSDRPWGRATVYDANEC 313
GGRCKCNGHAS+C+K +G LVCEC+HNTAG +C++CKPF DRPW RAT +ANEC
Sbjct: 281 GGRCKCNGHASKCVKDREGNLVCECKHNTAGPECDRCKPFHYDRPWQRATAREANEC 337
Score = 124 (48.7 bits), Expect = 6.1e-62, Sum P(2) = 6.1e-62
Identities = 34/111 (30%), Positives = 44/111 (39%)
Query: 192 TDRHKKQGGRCKCNGHASRC--------IKSPQGELVC-ECRHNTAGKDCEKCKPFFSDR 242
T R + C CN HA RC + + VC CRHNTAG+ C CK + R
Sbjct: 330 TAREANECVACHCNLHARRCRFNMELYKLSGRRSGGVCLNCRHNTAGRHCHYCKEGYY-R 388
Query: 243 PWGRATVYDANECKGGRCKCNGHASRCIKSPQGALVCECRHNTAGKDCEKC 293
+A + CK C G A + G C C+ G C +C
Sbjct: 389 DMSKA-ISHRRACKACDCHPVGAAGKTCNQTTGQ--CPCKDGVTGITCNRC 436
Score = 68 (29.0 bits), Expect = 4.8e-56, Sum P(2) = 4.8e-56
Identities = 35/139 (25%), Positives = 47/139 (33%)
Query: 184 GNEQEALCTD-RHKKQGGRCK-CN-GH---ASRCIKSPQGELVCECRH-NTAGKDCEKCK 236
G +C + RH G C C G+ S+ I + C+C AGK C +
Sbjct: 360 GRRSGGVCLNCRHNTAGRHCHYCKEGYYRDMSKAISHRRACKACDCHPVGAAGKTCNQTT 419
Query: 237 PFFSDRPWGRATVYDANECKGGRCKCNGHASRCIKSPQGALVCECRHNTAGKDCEK-CKP 295
+ G T N C G + + CIK P A DC+ CK
Sbjct: 420 GQCPCKD-G-VTGITCNRCAKGYQQSRSPIAPCIKIPVAAPTSSYSSPDGPTDCDSHCKA 477
Query: 296 FFSDRPWGRATVYDANECK 314
P G+ V CK
Sbjct: 478 -----PKGKMKVTMKKYCK 491
>UNIPROTKB|F1PSP7 [details] [associations]
symbol:NTN1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005576 "extracellular region" evidence=IEA]
InterPro:IPR001134 PROSITE:PS50189 GO:GO:0005576 InterPro:IPR013032
PROSITE:PS00022 InterPro:IPR002049 InterPro:IPR008993 Pfam:PF00053
SMART:SM00180 SUPFAM:SSF50242 PROSITE:PS01248 PROSITE:PS50027
InterPro:IPR018933 Pfam:PF01759 SMART:SM00643 InterPro:IPR008211
Pfam:PF00055 SMART:SM00136 PROSITE:PS51117
GeneTree:ENSGT00690000102103 OMA:NCHTCDA EMBL:AAEX03003649
EMBL:AAEX03003650 EMBL:AAEX03003651 EMBL:AAEX03003652
EMBL:AAEX03003653 Ensembl:ENSCAFT00000027581 Uniprot:F1PSP7
Length = 603
Score = 526 (190.2 bits), Expect = 8.3e-83, Sum P(2) = 8.3e-83
Identities = 111/205 (54%), Positives = 139/205 (67%)
Query: 6 LLCVPLLIGAVCGEK-IDLNS------DPCY-ENGRPRRCIPDFVNAAFGQEVKVNSVCG 57
L V L+GAV G + + S DPC ENG PRRCIPDFVNAAFG++V+V+S CG
Sbjct: 12 LAAVACLVGAVRGGPGLSVFSGQAAQPDPCSDENGHPRRCIPDFVNAAFGKDVRVSSTCG 71
Query: 58 LESPERYCDTS--G-----ACHVCDAGSPRGRFPAEYLTDLNNPSNVTCWRSEAQTSVNS 110
P RYC S G +CH+C+A P+ P +LTDLNNP N+TCW+SE N
Sbjct: 72 -RPPARYCVVSERGEERLRSCHLCNASDPKKAHPPAFLTDLNNPHNLTCWQSE-----NY 125
Query: 111 LSASPDNVTLTLSLGKKFELTYISLSFCPKSIKPDSLAIYKSQDFGKSWQPLQFYSSQCK 170
L P NVTLTLSLGKKFE+TY+SL FC S +P+S+AIYKS D+G++W P QFYS+QC+
Sbjct: 126 LQF-PHNVTLTLSLGKKFEVTYVSLQFC--SPRPESMAIYKSMDYGRTWVPFQFYSTQCR 182
Query: 171 KLYGRTATGVISRGNEQEALCTDRH 195
K+Y R I++ NEQEA+CTD H
Sbjct: 183 KMYNRPHRAPITKQNEQEAVCTDSH 207
Score = 323 (118.8 bits), Expect = 8.3e-83, Sum P(2) = 8.3e-83
Identities = 61/125 (48%), Positives = 75/125 (60%)
Query: 199 GGRCKCNGHASRCIKSPQGELVCECRHNTAGKDCEKCKPFFSDRPWGRATVYDANECKGG 258
GGRCKCNGHA+RC++ LVC+CRHNTAG +C++CKPF DRPW RAT +ANEC
Sbjct: 282 GGRCKCNGHAARCVRDRDDSLVCDCRHNTAGPECDRCKPFHYDRPWQRATAREANECVA- 340
Query: 259 RCKCNGHASRC--------IKSPQGALVC-ECRHNTAGKDCEKCKPFFSDRPWGRATVYD 309
C CN HA RC + + VC CRHNTAG+ C CK + R G+ +
Sbjct: 341 -CNCNLHARRCRFNMELYKLSGRKSGGVCLNCRHNTAGRHCHYCKEGYY-RDMGKPITH- 397
Query: 310 ANECK 314
CK
Sbjct: 398 RKACK 402
Score = 127 (49.8 bits), Expect = 3.7e-62, Sum P(2) = 3.7e-62
Identities = 34/111 (30%), Positives = 44/111 (39%)
Query: 192 TDRHKKQGGRCKCNGHASRC--------IKSPQGELVC-ECRHNTAGKDCEKCKPFFSDR 242
T R + C CN HA RC + + VC CRHNTAG+ C CK + R
Sbjct: 331 TAREANECVACNCNLHARRCRFNMELYKLSGRKSGGVCLNCRHNTAGRHCHYCKEGYY-R 389
Query: 243 PWGRATVYDANECKGGRCKCNGHASRCIKSPQGALVCECRHNTAGKDCEKC 293
G+ + CK C G A + G C C+ G C +C
Sbjct: 390 DMGKPITH-RKACKACDCHPVGAAGKTCNQTTGQ--CPCKDGVTGITCNRC 437
Score = 51 (23.0 bits), Expect = 3.7e-54, Sum P(2) = 3.7e-54
Identities = 34/140 (24%), Positives = 46/140 (32%)
Query: 168 QCKKLYGRTATGVISRGNEQEALCTDRHKKQGGRC-KCNG-HASR----CIKSPQGELV- 220
+CK G A V R + +C RH G C +C H R E V
Sbjct: 284 RCK-CNGHAARCV--RDRDDSLVCDCRHNTAGPECDRCKPFHYDRPWQRATAREANECVA 340
Query: 221 CECRHNTAGKDCEKCKPFF--SDRPWGRATVYDANECKGGRCK-CNGHASRCIKSP---- 273
C C N + C + S R G + + G C C R + P
Sbjct: 341 CNC--NLHARRCRFNMELYKLSGRKSGGVCLNCRHNTAGRHCHYCKEGYYRDMGKPITHR 398
Query: 274 QGALVCECRH-NTAGKDCEK 292
+ C+C AGK C +
Sbjct: 399 KACKACDCHPVGAAGKTCNQ 418
>UNIPROTKB|O95631 [details] [associations]
symbol:NTN1 "Netrin-1" species:9606 "Homo sapiens"
[GO:0006915 "apoptotic process" evidence=IEA] [GO:0001764 "neuron
migration" evidence=IEA] [GO:0005604 "basement membrane"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0008284
"positive regulation of cell proliferation" evidence=IEA]
[GO:0016337 "cell-cell adhesion" evidence=IEA] [GO:0030334
"regulation of cell migration" evidence=IEA] [GO:0030517 "negative
regulation of axon extension" evidence=IEA] [GO:0040023
"establishment of nucleus localization" evidence=IEA] [GO:0042472
"inner ear morphogenesis" evidence=IEA] [GO:0045773 "positive
regulation of axon extension" evidence=IEA] [GO:0060603 "mammary
gland duct morphogenesis" evidence=IEA] [GO:0005515 "protein
binding" evidence=IPI] [GO:0005576 "extracellular region"
evidence=TAS] [GO:0007411 "axon guidance" evidence=TAS]
InterPro:IPR001134 PROSITE:PS50189 GO:GO:0005737
Reactome:REACT_111045 GO:GO:0006915 GO:GO:0007411 GO:GO:0001764
GO:GO:0005576 GO:GO:0008284 InterPro:IPR013032 PROSITE:PS00022
GO:GO:0030334 Reactome:REACT_111155 GO:GO:0016337 PROSITE:PS01186
GO:GO:0045773 InterPro:IPR002049 InterPro:IPR008993 Pfam:PF00053
SMART:SM00180 SUPFAM:SSF50242 PROSITE:PS01248 PROSITE:PS50027
GO:GO:0005604 GO:GO:0040023 InterPro:IPR018933 Pfam:PF01759
GO:GO:0030517 SMART:SM00643 GO:GO:0060603 InterPro:IPR008211
Pfam:PF00055 SMART:SM00136 PROSITE:PS51117 HOVERGEN:HBG006464
KO:K06843 EMBL:U75586 EMBL:GU727649 EMBL:AC090610 EMBL:AC005695
IPI:IPI00006732 RefSeq:NP_004813.2 UniGene:Hs.660885
ProteinModelPortal:O95631 SMR:O95631 DIP:DIP-46273N IntAct:O95631
STRING:O95631 PhosphoSite:O95631 PaxDb:O95631 PRIDE:O95631
Ensembl:ENST00000173229 Ensembl:ENST00000538852
Ensembl:ENST00000546090 GeneID:9423 KEGG:hsa:9423 UCSC:uc002glw.4
CTD:9423 GeneCards:GC17P008865 H-InvDB:HIX0039241 HGNC:HGNC:8029
MIM:601614 neXtProt:NX_O95631 PharmGKB:PA31813 eggNOG:NOG244580
HOGENOM:HOG000286017 InParanoid:O95631 OMA:NCHTCDA
OrthoDB:EOG4H19V9 PhylomeDB:O95631 ChEMBL:CHEMBL1741307
GenomeRNAi:9423 NextBio:35298 ArrayExpress:O95631 Bgee:O95631
CleanEx:HS_NTN1 Genevestigator:O95631 GermOnline:ENSG00000065320
Uniprot:O95631
Length = 604
Score = 525 (189.9 bits), Expect = 1.1e-82, Sum P(2) = 1.1e-82
Identities = 110/205 (53%), Positives = 138/205 (67%)
Query: 6 LLCVPLLIGAVCGEK-IDL------NSDPCY-ENGRPRRCIPDFVNAAFGQEVKVNSVCG 57
L V L+GAV G + + DPC ENG PRRCIPDFVNAAFG++V+V+S CG
Sbjct: 12 LAAVACLVGAVRGGPGLSMFAGQAAQPDPCSDENGHPRRCIPDFVNAAFGKDVRVSSTCG 71
Query: 58 LESPERYCDTS--G-----ACHVCDAGSPRGRFPAEYLTDLNNPSNVTCWRSEAQTSVNS 110
P RYC S G +CH+C+A P+ P +LTDLNNP N+TCW+SE N
Sbjct: 72 -RPPARYCVVSERGEERLRSCHLCNASDPKKAHPPAFLTDLNNPHNLTCWQSE-----NY 125
Query: 111 LSASPDNVTLTLSLGKKFELTYISLSFCPKSIKPDSLAIYKSQDFGKSWQPLQFYSSQCK 170
L P NVTLTLSLGKKFE+TY+SL FC S +P+S+AIYKS D+G++W P QFYS+QC+
Sbjct: 126 LQF-PHNVTLTLSLGKKFEVTYVSLQFC--SPRPESMAIYKSMDYGRTWVPFQFYSTQCR 182
Query: 171 KLYGRTATGVISRGNEQEALCTDRH 195
K+Y R I++ NEQEA+CTD H
Sbjct: 183 KMYNRPHRAPITKQNEQEAVCTDSH 207
Score = 323 (118.8 bits), Expect = 1.1e-82, Sum P(2) = 1.1e-82
Identities = 61/125 (48%), Positives = 75/125 (60%)
Query: 199 GGRCKCNGHASRCIKSPQGELVCECRHNTAGKDCEKCKPFFSDRPWGRATVYDANECKGG 258
GGRCKCNGHA+RC++ LVC+CRHNTAG +C++CKPF DRPW RAT +ANEC
Sbjct: 282 GGRCKCNGHAARCVRDRDDSLVCDCRHNTAGPECDRCKPFHYDRPWQRATAREANECVA- 340
Query: 259 RCKCNGHASRC--------IKSPQGALVC-ECRHNTAGKDCEKCKPFFSDRPWGRATVYD 309
C CN HA RC + + VC CRHNTAG+ C CK + R G+ +
Sbjct: 341 -CNCNLHARRCRFNMELYKLSGRKSGGVCLNCRHNTAGRHCHYCKEGYY-RDMGKPITH- 397
Query: 310 ANECK 314
CK
Sbjct: 398 RKACK 402
Score = 127 (49.8 bits), Expect = 4.8e-62, Sum P(2) = 4.8e-62
Identities = 34/111 (30%), Positives = 44/111 (39%)
Query: 192 TDRHKKQGGRCKCNGHASRC--------IKSPQGELVC-ECRHNTAGKDCEKCKPFFSDR 242
T R + C CN HA RC + + VC CRHNTAG+ C CK + R
Sbjct: 331 TAREANECVACNCNLHARRCRFNMELYKLSGRKSGGVCLNCRHNTAGRHCHYCKEGYY-R 389
Query: 243 PWGRATVYDANECKGGRCKCNGHASRCIKSPQGALVCECRHNTAGKDCEKC 293
G+ + CK C G A + G C C+ G C +C
Sbjct: 390 DMGKPITH-RKACKACDCHPVGAAGKTCNQTTGQ--CPCKDGVTGITCNRC 437
Score = 51 (23.0 bits), Expect = 4.8e-54, Sum P(2) = 4.8e-54
Identities = 34/140 (24%), Positives = 46/140 (32%)
Query: 168 QCKKLYGRTATGVISRGNEQEALCTDRHKKQGGRC-KCNG-HASR----CIKSPQGELV- 220
+CK G A V R + +C RH G C +C H R E V
Sbjct: 284 RCK-CNGHAARCV--RDRDDSLVCDCRHNTAGPECDRCKPFHYDRPWQRATAREANECVA 340
Query: 221 CECRHNTAGKDCEKCKPFF--SDRPWGRATVYDANECKGGRCK-CNGHASRCIKSP---- 273
C C N + C + S R G + + G C C R + P
Sbjct: 341 CNC--NLHARRCRFNMELYKLSGRKSGGVCLNCRHNTAGRHCHYCKEGYYRDMGKPITHR 398
Query: 274 QGALVCECRH-NTAGKDCEK 292
+ C+C AGK C +
Sbjct: 399 KACKACDCHPVGAAGKTCNQ 418
>RGD|619809 [details] [associations]
symbol:Ntn1 "netrin 1" species:10116 "Rattus norvegicus"
[GO:0001764 "neuron migration" evidence=ISO] [GO:0005576
"extracellular region" evidence=TAS] [GO:0005578 "proteinaceous
extracellular matrix" evidence=IDA] [GO:0005604 "basement membrane"
evidence=ISO] [GO:0005737 "cytoplasm" evidence=ISO] [GO:0006915
"apoptotic process" evidence=IEA] [GO:0007409 "axonogenesis"
evidence=ISO] [GO:0007411 "axon guidance" evidence=ISO;NAS]
[GO:0008284 "positive regulation of cell proliferation"
evidence=ISO] [GO:0016337 "cell-cell adhesion" evidence=ISO]
[GO:0030334 "regulation of cell migration" evidence=ISO]
[GO:0030517 "negative regulation of axon extension" evidence=ISO]
[GO:0030879 "mammary gland development" evidence=ISO] [GO:0033564
"anterior/posterior axon guidance" evidence=ISO] [GO:0040023
"establishment of nucleus localization" evidence=ISO] [GO:0042472
"inner ear morphogenesis" evidence=ISO] [GO:0045773 "positive
regulation of axon extension" evidence=ISO] [GO:0060603 "mammary
gland duct morphogenesis" evidence=ISO] InterPro:IPR001134
PROSITE:PS50189 RGD:619809 GO:GO:0005737 GO:GO:0006915
GO:GO:0007411 GO:GO:0001764 GO:GO:0008284 GO:GO:0005578
InterPro:IPR013032 PROSITE:PS00022 GO:GO:0030334
Reactome:REACT_127416 Reactome:REACT_96538 GO:GO:0016337
PROSITE:PS01186 GO:GO:0045773 InterPro:IPR002049 InterPro:IPR008993
Pfam:PF00053 SMART:SM00180 SUPFAM:SSF50242 PROSITE:PS01248
PROSITE:PS50027 GO:GO:0005604 GO:GO:0040023 InterPro:IPR018933
Pfam:PF01759 HSSP:P02468 GO:GO:0030517 SMART:SM00643 GO:GO:0060603
InterPro:IPR008211 Pfam:PF00055 SMART:SM00136 PROSITE:PS51117
HOVERGEN:HBG006464 CTD:9423 eggNOG:NOG244580 HOGENOM:HOG000286017
OrthoDB:EOG4H19V9 EMBL:AY028417 IPI:IPI00205229 UniGene:Rn.41052
ProteinModelPortal:Q924Z9 IntAct:Q924Z9 STRING:Q924Z9 PRIDE:Q924Z9
UCSC:RGD:619809 InParanoid:Q924Z9 NextBio:618675
ArrayExpress:Q924Z9 Genevestigator:Q924Z9 Uniprot:Q924Z9
Length = 604
Score = 522 (188.8 bits), Expect = 1.1e-82, Sum P(2) = 1.1e-82
Identities = 109/205 (53%), Positives = 138/205 (67%)
Query: 6 LLCVPLLIGAVCGEK-IDL------NSDPCY-ENGRPRRCIPDFVNAAFGQEVKVNSVCG 57
L V L+GAV G + + DPC ENG PRRCIPDFVNAAFG++V+V+S CG
Sbjct: 12 LAAVACLVGAVRGGPGLSMFAGQAAQPDPCSDENGHPRRCIPDFVNAAFGKDVRVSSTCG 71
Query: 58 LESPERYCDTS--G-----ACHVCDAGSPRGRFPAEYLTDLNNPSNVTCWRSEAQTSVNS 110
P RYC S G +CH+C++ P+ P +LTDLNNP N+TCW+SE N
Sbjct: 72 -RPPARYCVVSERGEERLRSCHLCNSSDPKKAHPPAFLTDLNNPHNLTCWQSE-----NY 125
Query: 111 LSASPDNVTLTLSLGKKFELTYISLSFCPKSIKPDSLAIYKSQDFGKSWQPLQFYSSQCK 170
L P NVTLTLSLGKKFE+TY+SL FC S +P+S+AIYKS D+G++W P QFYS+QC+
Sbjct: 126 LQF-PHNVTLTLSLGKKFEVTYVSLQFC--SPRPESMAIYKSMDYGRTWVPFQFYSTQCR 182
Query: 171 KLYGRTATGVISRGNEQEALCTDRH 195
K+Y R I++ NEQEA+CTD H
Sbjct: 183 KMYNRPHRAPITKQNEQEAVCTDSH 207
Score = 326 (119.8 bits), Expect = 1.1e-82, Sum P(2) = 1.1e-82
Identities = 62/125 (49%), Positives = 75/125 (60%)
Query: 199 GGRCKCNGHASRCIKSPQGELVCECRHNTAGKDCEKCKPFFSDRPWGRATVYDANECKGG 258
GGRCKCNGHA+RC++ LVC+CRHNTAG +C++CKPF DRPW RAT +ANEC
Sbjct: 282 GGRCKCNGHAARCVRDRDDSLVCDCRHNTAGPECDRCKPFHYDRPWQRATAREANECVA- 340
Query: 259 RCKCNGHASRC--------IKSPQGALVC-ECRHNTAGKDCEKCKPFFSDRPWGRATVYD 309
C CN HA RC + + VC CRHNTAG+ C CK F R G+ +
Sbjct: 341 -CNCNLHARRCRFNMELYKLSGRKSGGVCLNCRHNTAGRHCHYCKEGFY-RDMGKPITH- 397
Query: 310 ANECK 314
CK
Sbjct: 398 RKACK 402
Score = 130 (50.8 bits), Expect = 4.8e-62, Sum P(2) = 4.8e-62
Identities = 35/111 (31%), Positives = 44/111 (39%)
Query: 192 TDRHKKQGGRCKCNGHASRC--------IKSPQGELVC-ECRHNTAGKDCEKCKPFFSDR 242
T R + C CN HA RC + + VC CRHNTAG+ C CK F R
Sbjct: 331 TAREANECVACNCNLHARRCRFNMELYKLSGRKSGGVCLNCRHNTAGRHCHYCKEGFY-R 389
Query: 243 PWGRATVYDANECKGGRCKCNGHASRCIKSPQGALVCECRHNTAGKDCEKC 293
G+ + CK C G A + G C C+ G C +C
Sbjct: 390 DMGKPITH-RKACKACDCHPVGAAGKTCNQTTGQ--CPCKDGVTGITCNRC 437
Score = 57 (25.1 bits), Expect = 2.3e-54, Sum P(2) = 2.3e-54
Identities = 28/119 (23%), Positives = 40/119 (33%)
Query: 184 GNEQEALCTD-RHKKQGGRCK-CNGHASRCIKSP----QGELVCECRH-NTAGKDCEKCK 236
G + +C + RH G C C R + P + C+C AGK C +
Sbjct: 361 GRKSGGVCLNCRHNTAGRHCHYCKEGFYRDMGKPITHRKACKACDCHPVGAAGKTCNQTT 420
Query: 237 PFFSDRPWGRATVYDANECKGGRCKCNGHASRCIKSPQGALVCECRHNTAGKDCEK-CK 294
+ G T N C G + + CIK P +DC+ CK
Sbjct: 421 GQCPCKD-G-VTGITCNRCAKGYQQSRSPIAPCIKIPVAPPTTAASSMEEPEDCDSYCK 477
Score = 51 (23.0 bits), Expect = 9.9e-54, Sum P(2) = 9.9e-54
Identities = 34/140 (24%), Positives = 46/140 (32%)
Query: 168 QCKKLYGRTATGVISRGNEQEALCTDRHKKQGGRC-KCNG-HASR----CIKSPQGELV- 220
+CK G A V R + +C RH G C +C H R E V
Sbjct: 284 RCK-CNGHAARCV--RDRDDSLVCDCRHNTAGPECDRCKPFHYDRPWQRATAREANECVA 340
Query: 221 CECRHNTAGKDCEKCKPFF--SDRPWGRATVYDANECKGGRCK-CNGHASRCIKSP---- 273
C C N + C + S R G + + G C C R + P
Sbjct: 341 CNC--NLHARRCRFNMELYKLSGRKSGGVCLNCRHNTAGRHCHYCKEGFYRDMGKPITHR 398
Query: 274 QGALVCECRH-NTAGKDCEK 292
+ C+C AGK C +
Sbjct: 399 KACKACDCHPVGAAGKTCNQ 418
>UNIPROTKB|F1LPC8 [details] [associations]
symbol:Ntn1 "Netrin-1" species:10116 "Rattus norvegicus"
[GO:0001764 "neuron migration" evidence=IEA] [GO:0005604 "basement
membrane" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0007411 "axon guidance" evidence=IEA] [GO:0008284 "positive
regulation of cell proliferation" evidence=IEA] [GO:0016337
"cell-cell adhesion" evidence=IEA] [GO:0030334 "regulation of cell
migration" evidence=IEA] [GO:0030517 "negative regulation of axon
extension" evidence=IEA] [GO:0040023 "establishment of nucleus
localization" evidence=IEA] [GO:0042472 "inner ear morphogenesis"
evidence=IEA] [GO:0045773 "positive regulation of axon extension"
evidence=IEA] [GO:0060603 "mammary gland duct morphogenesis"
evidence=IEA] InterPro:IPR001134 PROSITE:PS50189 RGD:619809
GO:GO:0005737 GO:GO:0007411 GO:GO:0001764 GO:GO:0008284
InterPro:IPR013032 PROSITE:PS00022 GO:GO:0030334 GO:GO:0016337
GO:GO:0045773 InterPro:IPR002049 InterPro:IPR008993 Pfam:PF00053
SMART:SM00180 SUPFAM:SSF50242 PROSITE:PS01248 PROSITE:PS50027
GO:GO:0005604 GO:GO:0040023 InterPro:IPR018933 Pfam:PF01759
GO:GO:0030517 SMART:SM00643 GO:GO:0060603 InterPro:IPR008211
Pfam:PF00055 SMART:SM00136 PROSITE:PS51117
GeneTree:ENSGT00690000102103 KO:K06843 OMA:NCHTCDA IPI:IPI00205229
RefSeq:NP_446183.2 Ensembl:ENSRNOT00000005255 GeneID:114523
KEGG:rno:114523 ArrayExpress:F1LPC8 Uniprot:F1LPC8
Length = 604
Score = 522 (188.8 bits), Expect = 1.1e-82, Sum P(2) = 1.1e-82
Identities = 109/205 (53%), Positives = 138/205 (67%)
Query: 6 LLCVPLLIGAVCGEK-IDL------NSDPCY-ENGRPRRCIPDFVNAAFGQEVKVNSVCG 57
L V L+GAV G + + DPC ENG PRRCIPDFVNAAFG++V+V+S CG
Sbjct: 12 LAAVACLVGAVRGGPGLSMFAGQAAQPDPCSDENGHPRRCIPDFVNAAFGKDVRVSSTCG 71
Query: 58 LESPERYCDTS--G-----ACHVCDAGSPRGRFPAEYLTDLNNPSNVTCWRSEAQTSVNS 110
P RYC S G +CH+C++ P+ P +LTDLNNP N+TCW+SE N
Sbjct: 72 -RPPARYCVVSERGEERLRSCHLCNSSDPKKAHPPAFLTDLNNPHNLTCWQSE-----NY 125
Query: 111 LSASPDNVTLTLSLGKKFELTYISLSFCPKSIKPDSLAIYKSQDFGKSWQPLQFYSSQCK 170
L P NVTLTLSLGKKFE+TY+SL FC S +P+S+AIYKS D+G++W P QFYS+QC+
Sbjct: 126 LQF-PHNVTLTLSLGKKFEVTYVSLQFC--SPRPESMAIYKSMDYGRTWVPFQFYSTQCR 182
Query: 171 KLYGRTATGVISRGNEQEALCTDRH 195
K+Y R I++ NEQEA+CTD H
Sbjct: 183 KMYNRPHRAPITKQNEQEAVCTDSH 207
Score = 326 (119.8 bits), Expect = 1.1e-82, Sum P(2) = 1.1e-82
Identities = 62/125 (49%), Positives = 75/125 (60%)
Query: 199 GGRCKCNGHASRCIKSPQGELVCECRHNTAGKDCEKCKPFFSDRPWGRATVYDANECKGG 258
GGRCKCNGHA+RC++ LVC+CRHNTAG +C++CKPF DRPW RAT +ANEC
Sbjct: 282 GGRCKCNGHAARCVRDRDDSLVCDCRHNTAGPECDRCKPFHYDRPWQRATAREANECVA- 340
Query: 259 RCKCNGHASRC--------IKSPQGALVC-ECRHNTAGKDCEKCKPFFSDRPWGRATVYD 309
C CN HA RC + + VC CRHNTAG+ C CK F R G+ +
Sbjct: 341 -CNCNLHARRCRFNMELYKLSGRKSGGVCLNCRHNTAGRHCHYCKEGFY-RDMGKPITH- 397
Query: 310 ANECK 314
CK
Sbjct: 398 RKACK 402
Score = 130 (50.8 bits), Expect = 4.8e-62, Sum P(2) = 4.8e-62
Identities = 35/111 (31%), Positives = 44/111 (39%)
Query: 192 TDRHKKQGGRCKCNGHASRC--------IKSPQGELVC-ECRHNTAGKDCEKCKPFFSDR 242
T R + C CN HA RC + + VC CRHNTAG+ C CK F R
Sbjct: 331 TAREANECVACNCNLHARRCRFNMELYKLSGRKSGGVCLNCRHNTAGRHCHYCKEGFY-R 389
Query: 243 PWGRATVYDANECKGGRCKCNGHASRCIKSPQGALVCECRHNTAGKDCEKC 293
G+ + CK C G A + G C C+ G C +C
Sbjct: 390 DMGKPITH-RKACKACDCHPVGAAGKTCNQTTGQ--CPCKDGVTGITCNRC 437
Score = 57 (25.1 bits), Expect = 2.3e-54, Sum P(2) = 2.3e-54
Identities = 28/119 (23%), Positives = 40/119 (33%)
Query: 184 GNEQEALCTD-RHKKQGGRCK-CNGHASRCIKSP----QGELVCECRH-NTAGKDCEKCK 236
G + +C + RH G C C R + P + C+C AGK C +
Sbjct: 361 GRKSGGVCLNCRHNTAGRHCHYCKEGFYRDMGKPITHRKACKACDCHPVGAAGKTCNQTT 420
Query: 237 PFFSDRPWGRATVYDANECKGGRCKCNGHASRCIKSPQGALVCECRHNTAGKDCEK-CK 294
+ G T N C G + + CIK P +DC+ CK
Sbjct: 421 GQCPCKD-G-VTGITCNRCAKGYQQSRSPIAPCIKIPVAPPTTAASSMEEPEDCDSYCK 477
Score = 51 (23.0 bits), Expect = 9.9e-54, Sum P(2) = 9.9e-54
Identities = 34/140 (24%), Positives = 46/140 (32%)
Query: 168 QCKKLYGRTATGVISRGNEQEALCTDRHKKQGGRC-KCNG-HASR----CIKSPQGELV- 220
+CK G A V R + +C RH G C +C H R E V
Sbjct: 284 RCK-CNGHAARCV--RDRDDSLVCDCRHNTAGPECDRCKPFHYDRPWQRATAREANECVA 340
Query: 221 CECRHNTAGKDCEKCKPFF--SDRPWGRATVYDANECKGGRCK-CNGHASRCIKSP---- 273
C C N + C + S R G + + G C C R + P
Sbjct: 341 CNC--NLHARRCRFNMELYKLSGRKSGGVCLNCRHNTAGRHCHYCKEGFYRDMGKPITHR 398
Query: 274 QGALVCECRH-NTAGKDCEK 292
+ C+C AGK C +
Sbjct: 399 KACKACDCHPVGAAGKTCNQ 418
>MGI|MGI:105088 [details] [associations]
symbol:Ntn1 "netrin 1" species:10090 "Mus musculus"
[GO:0001764 "neuron migration" evidence=IMP] [GO:0005515 "protein
binding" evidence=IPI] [GO:0005576 "extracellular region"
evidence=IEA] [GO:0005578 "proteinaceous extracellular matrix"
evidence=ISO] [GO:0005604 "basement membrane" evidence=IDA]
[GO:0005737 "cytoplasm" evidence=IDA] [GO:0006915 "apoptotic
process" evidence=IEA] [GO:0007409 "axonogenesis" evidence=IDA]
[GO:0007411 "axon guidance" evidence=IDA;IMP] [GO:0008284 "positive
regulation of cell proliferation" evidence=IMP] [GO:0016337
"cell-cell adhesion" evidence=IGI] [GO:0030334 "regulation of cell
migration" evidence=IMP;IDA] [GO:0030517 "negative regulation of
axon extension" evidence=IDA] [GO:0030879 "mammary gland
development" evidence=IGI] [GO:0033564 "anterior/posterior axon
guidance" evidence=IMP] [GO:0040023 "establishment of nucleus
localization" evidence=IDA] [GO:0042472 "inner ear morphogenesis"
evidence=IMP] [GO:0045773 "positive regulation of axon extension"
evidence=IDA] [GO:0060603 "mammary gland duct morphogenesis"
evidence=IGI] [GO:0071944 "cell periphery" evidence=ISO]
InterPro:IPR001134 PROSITE:PS50189 MGI:MGI:105088 GO:GO:0005737
GO:GO:0006915 GO:GO:0007411 GO:GO:0001764 GO:GO:0008284
InterPro:IPR013032 PROSITE:PS00022 GO:GO:0030334
Reactome:REACT_127416 GO:GO:0042472 GO:GO:0071944 GO:GO:0016337
PROSITE:PS01186 GO:GO:0045773 InterPro:IPR002049 InterPro:IPR008993
Pfam:PF00053 SMART:SM00180 SUPFAM:SSF50242 PROSITE:PS01248
PROSITE:PS50027 GO:GO:0005604 GO:GO:0040023 InterPro:IPR018933
Pfam:PF01759 EMBL:CH466601 GO:GO:0030517 Reactome:REACT_137402
SMART:SM00643 GO:GO:0060603 InterPro:IPR008211 Pfam:PF00055
SMART:SM00136 PROSITE:PS51117 GeneTree:ENSGT00690000102103
HOVERGEN:HBG006464 KO:K06843 CTD:9423 eggNOG:NOG244580
HOGENOM:HOG000286017 OMA:NCHTCDA OrthoDB:EOG4H19V9 EMBL:U65418
EMBL:AF128865 EMBL:AL669842 EMBL:AL606831 EMBL:AL662894
EMBL:BC141294 EMBL:U23505 IPI:IPI00114257 RefSeq:NP_032770.2
UniGene:Mm.39095 ProteinModelPortal:O09118 SMR:O09118 IntAct:O09118
STRING:O09118 PhosphoSite:O09118 PRIDE:O09118
Ensembl:ENSMUST00000021284 Ensembl:ENSMUST00000108674 GeneID:18208
KEGG:mmu:18208 InParanoid:B1ARR0 NextBio:293590 Bgee:O09118
CleanEx:MM_NTN1 Genevestigator:O09118 GermOnline:ENSMUSG00000020902
Uniprot:O09118
Length = 604
Score = 522 (188.8 bits), Expect = 1.1e-82, Sum P(2) = 1.1e-82
Identities = 109/205 (53%), Positives = 138/205 (67%)
Query: 6 LLCVPLLIGAVCGEK-IDL------NSDPCY-ENGRPRRCIPDFVNAAFGQEVKVNSVCG 57
L V L+GAV G + + DPC ENG PRRCIPDFVNAAFG++V+V+S CG
Sbjct: 12 LAAVACLVGAVRGGPGLSMFAGQAAQPDPCSDENGHPRRCIPDFVNAAFGKDVRVSSTCG 71
Query: 58 LESPERYCDTS--G-----ACHVCDAGSPRGRFPAEYLTDLNNPSNVTCWRSEAQTSVNS 110
P RYC S G +CH+C++ P+ P +LTDLNNP N+TCW+SE N
Sbjct: 72 -RPPARYCVVSERGEERLRSCHLCNSSDPKKAHPPAFLTDLNNPHNLTCWQSE-----NY 125
Query: 111 LSASPDNVTLTLSLGKKFELTYISLSFCPKSIKPDSLAIYKSQDFGKSWQPLQFYSSQCK 170
L P NVTLTLSLGKKFE+TY+SL FC S +P+S+AIYKS D+G++W P QFYS+QC+
Sbjct: 126 LQF-PHNVTLTLSLGKKFEVTYVSLQFC--SPRPESMAIYKSMDYGRTWVPFQFYSTQCR 182
Query: 171 KLYGRTATGVISRGNEQEALCTDRH 195
K+Y R I++ NEQEA+CTD H
Sbjct: 183 KMYNRPHRAPITKQNEQEAVCTDSH 207
Score = 326 (119.8 bits), Expect = 1.1e-82, Sum P(2) = 1.1e-82
Identities = 62/125 (49%), Positives = 75/125 (60%)
Query: 199 GGRCKCNGHASRCIKSPQGELVCECRHNTAGKDCEKCKPFFSDRPWGRATVYDANECKGG 258
GGRCKCNGHA+RC++ LVC+CRHNTAG +C++CKPF DRPW RAT +ANEC
Sbjct: 282 GGRCKCNGHAARCVRDRDDSLVCDCRHNTAGPECDRCKPFHYDRPWQRATAREANECVA- 340
Query: 259 RCKCNGHASRC--------IKSPQGALVC-ECRHNTAGKDCEKCKPFFSDRPWGRATVYD 309
C CN HA RC + + VC CRHNTAG+ C CK F R G+ +
Sbjct: 341 -CNCNLHARRCRFNMELYKLSGRKSGGVCLNCRHNTAGRHCHYCKEGFY-RDMGKPITH- 397
Query: 310 ANECK 314
CK
Sbjct: 398 RKACK 402
Score = 130 (50.8 bits), Expect = 4.8e-62, Sum P(2) = 4.8e-62
Identities = 35/111 (31%), Positives = 44/111 (39%)
Query: 192 TDRHKKQGGRCKCNGHASRC--------IKSPQGELVC-ECRHNTAGKDCEKCKPFFSDR 242
T R + C CN HA RC + + VC CRHNTAG+ C CK F R
Sbjct: 331 TAREANECVACNCNLHARRCRFNMELYKLSGRKSGGVCLNCRHNTAGRHCHYCKEGFY-R 389
Query: 243 PWGRATVYDANECKGGRCKCNGHASRCIKSPQGALVCECRHNTAGKDCEKC 293
G+ + CK C G A + G C C+ G C +C
Sbjct: 390 DMGKPITH-RKACKACDCHPVGAAGKTCNQTTGQ--CPCKDGVTGITCNRC 437
Score = 51 (23.0 bits), Expect = 9.9e-54, Sum P(2) = 9.9e-54
Identities = 34/140 (24%), Positives = 46/140 (32%)
Query: 168 QCKKLYGRTATGVISRGNEQEALCTDRHKKQGGRC-KCNG-HASR----CIKSPQGELV- 220
+CK G A V R + +C RH G C +C H R E V
Sbjct: 284 RCK-CNGHAARCV--RDRDDSLVCDCRHNTAGPECDRCKPFHYDRPWQRATAREANECVA 340
Query: 221 CECRHNTAGKDCEKCKPFF--SDRPWGRATVYDANECKGGRCK-CNGHASRCIKSP---- 273
C C N + C + S R G + + G C C R + P
Sbjct: 341 CNC--NLHARRCRFNMELYKLSGRKSGGVCLNCRHNTAGRHCHYCKEGFYRDMGKPITHR 398
Query: 274 QGALVCECRH-NTAGKDCEK 292
+ C+C AGK C +
Sbjct: 399 KACKACDCHPVGAAGKTCNQ 418
>ZFIN|ZDB-GENE-050310-2 [details] [associations]
symbol:ntn2 "netrin 2" species:7955 "Danio rerio"
[GO:0005576 "extracellular region" evidence=IEA] InterPro:IPR001134
PROSITE:PS50189 ZFIN:ZDB-GENE-050310-2 GO:GO:0005576
InterPro:IPR002049 InterPro:IPR008993 Pfam:PF00053 SMART:SM00180
SUPFAM:SSF50242 PROSITE:PS01248 PROSITE:PS50027 InterPro:IPR018933
Pfam:PF01759 SMART:SM00643 InterPro:IPR008211 Pfam:PF00055
SMART:SM00136 PROSITE:PS51117 HOVERGEN:HBG006464 eggNOG:NOG244580
HOGENOM:HOG000286017 OrthoDB:EOG4VHK67 GeneTree:ENSGT00700000104042
OMA:RAHPASY EMBL:FP102170 EMBL:CU929347 EMBL:AY928518
IPI:IPI00628796 RefSeq:NP_001032492.1 UniGene:Dr.153063
Ensembl:ENSDART00000112318 GeneID:641469 KEGG:dre:641469 CTD:641469
NextBio:20901575 Uniprot:Q32SK9
Length = 600
Score = 518 (187.4 bits), Expect = 1.1e-82, Sum P(2) = 1.1e-82
Identities = 104/180 (57%), Positives = 126/180 (70%)
Query: 25 SDPCYEN-GRPRRCIPDFVNAAFGQEVKVNSVCGLESPERYC-----DTSGA---CHVCD 75
+DPCYE G RRCIP+F+NAAFGQEV V+SVCG R C D A C +CD
Sbjct: 23 TDPCYEETGAARRCIPEFINAAFGQEVSVSSVCG-RPVSRSCSLVERDDRPAVRTCQICD 81
Query: 76 AGSPRGRFPAEYLTDLNNPSNVTCWRSEAQTSVNSLSASPDNVTLTLSLGKKFELTYISL 135
A PR PA YLTDLN+ N+TCW+SE +L +SP NVTLTLSLGKKFE+TY+SL
Sbjct: 82 ASDPRNAHPASYLTDLNSAHNLTCWQSE------NLQSSPLNVTLTLSLGKKFEITYVSL 135
Query: 136 SFCPKSIKPDSLAIYKSQDFGKSWQPLQFYSSQCKKLYGRTATGVISRGNEQEALCTDRH 195
FC S +P+SLAIYKS D+G++W P QFYSSQC+++Y R I++ NEQEALCTD H
Sbjct: 136 QFC--SPRPESLAIYKSMDYGRTWTPYQFYSSQCRRMYNRPNKAAITKQNEQEALCTDGH 193
Score = 330 (121.2 bits), Expect = 1.1e-82, Sum P(2) = 1.1e-82
Identities = 63/125 (50%), Positives = 77/125 (61%)
Query: 199 GGRCKCNGHASRCIKSPQGELVCECRHNTAGKDCEKCKPFFSDRPWGRATVYDANECKGG 258
GGRCKCNGHASRC++ G+L+CEC+HNT G +C++CKPF DRPW RAT +ANEC
Sbjct: 276 GGRCKCNGHASRCVREKDGKLLCECKHNTEGPECDRCKPFHYDRPWQRATGKEANECLP- 334
Query: 259 RCKCNGHASRC--------IKSPQGALVC-ECRHNTAGKDCEKCKPFFSDRPWGRATVYD 309
C CN HA RC + + VC CRHNTAG+ C CK F R G+A +
Sbjct: 335 -CNCNLHARRCRFNMELYKLSGRKSGGVCMNCRHNTAGRHCHYCKEGFY-RDMGKAITH- 391
Query: 310 ANECK 314
CK
Sbjct: 392 RRACK 396
Score = 133 (51.9 bits), Expect = 6.1e-62, Sum P(2) = 6.1e-62
Identities = 34/101 (33%), Positives = 42/101 (41%)
Query: 202 CKCNGHASRC--------IKSPQGELVC-ECRHNTAGKDCEKCKPFFSDRPWGRATVYDA 252
C CN HA RC + + VC CRHNTAG+ C CK F R G+A +
Sbjct: 335 CNCNLHARRCRFNMELYKLSGRKSGGVCMNCRHNTAGRHCHYCKEGFY-RDMGKAITH-R 392
Query: 253 NECKGGRCKCNGHASRCIKSPQGALVCECRHNTAGKDCEKC 293
CK C G A + G C C+ G C +C
Sbjct: 393 RACKACDCHPVGAAGKTCNQTTGQ--CPCKDGVTGITCNRC 431
Score = 55 (24.4 bits), Expect = 9.9e-54, Sum P(2) = 9.9e-54
Identities = 11/43 (25%), Positives = 18/43 (41%)
Query: 195 HKKQGGRCKCN--GHASRCIKSPQGELVCECRHNTAGKDCEKC 235
H++ C C+ G A + G+ C C+ G C +C
Sbjct: 391 HRRACKACDCHPVGAAGKTCNQTTGQ--CPCKDGVTGITCNRC 431
Score = 55 (24.4 bits), Expect = 9.9e-54, Sum P(2) = 9.9e-54
Identities = 28/124 (22%), Positives = 43/124 (34%)
Query: 183 RGNEQEALCTDRHKKQGGRC-KCNG-HASRCIKSPQGELVCECRHNTAGKDCEKCKPF-- 238
R + + LC +H +G C +C H R + G+ EC +C+ F
Sbjct: 290 REKDGKLLCECKHNTEGPECDRCKPFHYDRPWQRATGKEANECLPCNCNLHARRCR-FNM 348
Query: 239 ----FSDRPWGRATVYDANECKGGRCK-CN-GH---ASRCIKSPQGALVCECRH-NTAGK 288
S R G + + G C C G + I + C+C AGK
Sbjct: 349 ELYKLSGRKSGGVCMNCRHNTAGRHCHYCKEGFYRDMGKAITHRRACKACDCHPVGAAGK 408
Query: 289 DCEK 292
C +
Sbjct: 409 TCNQ 412
Score = 55 (24.4 bits), Expect = 1.1e-32, Sum P(2) = 1.1e-32
Identities = 38/160 (23%), Positives = 63/160 (39%)
Query: 8 CVPLLIGAVCGEKIDLNSDPCYENGRP--RRCIPDFVNAAFGQEVKVNSVCGLESPERYC 65
C+P I A G+++ ++S C GRP R C V V+ +C P
Sbjct: 36 CIPEFINAAFGQEVSVSS-VC---GRPVSRSC--SLVERDDRPAVRTCQICDASDPR--- 86
Query: 66 DTSGACHVCDAGSPRGR--FPAEYLTDLNNPSNVTCWRSEAQ----TSVNSLSASPDNVT 119
+ A ++ D S + +E L ++P NVT S + T V+ SP +
Sbjct: 87 NAHPASYLTDLNSAHNLTCWQSENLQ--SSPLNVTLTLSLGKKFEITYVSLQFCSPRPES 144
Query: 120 LTLSLGKKFELTYISLSF----CPKSI-KPDSLAIYKSQD 154
L + + T+ F C + +P+ AI K +
Sbjct: 145 LAIYKSMDYGRTWTPYQFYSSQCRRMYNRPNKAAITKQNE 184
>FB|FBgn0015773 [details] [associations]
symbol:NetA "Netrin-A" species:7227 "Drosophila melanogaster"
[GO:0005576 "extracellular region" evidence=ISS] [GO:0005578
"proteinaceous extracellular matrix" evidence=ISS] [GO:0007411
"axon guidance" evidence=IGI;ISS;NAS] [GO:0070983 "dendrite
guidance" evidence=IGI] [GO:0008045 "motor neuron axon guidance"
evidence=IMP] [GO:0008347 "glial cell migration" evidence=IMP]
[GO:2000289 "regulation of photoreceptor cell axon guidance"
evidence=IMP] InterPro:IPR001134 PROSITE:PS50189 EMBL:AE014298
GO:GO:0005578 PROSITE:PS00022 GO:GO:0008045 InterPro:IPR002049
InterPro:IPR008993 Pfam:PF00053 SMART:SM00180 SUPFAM:SSF50242
PROSITE:PS01248 PROSITE:PS50027 GO:GO:0008347 InterPro:IPR018933
Pfam:PF01759 GO:GO:0070983 SMART:SM00643 InterPro:IPR008211
Pfam:PF00055 SMART:SM00136 PROSITE:PS51117 eggNOG:NOG244580
GeneTree:ENSGT00700000104042 EMBL:U60316 EMBL:U63736 EMBL:AY089580
RefSeq:NP_001245667.1 RefSeq:NP_511154.3 UniGene:Dm.2915
ProteinModelPortal:Q24567 SMR:Q24567 IntAct:Q24567 MINT:MINT-285237
STRING:Q24567 EnsemblMetazoa:FBtr0073942 GeneID:32398
KEGG:dme:Dmel_CG18657 CTD:32398 FlyBase:FBgn0015773
InParanoid:Q24567 OMA:AIMAKVI OrthoDB:EOG470RZN PhylomeDB:Q24567
GenomeRNAi:32398 NextBio:778263 Bgee:Q24567 GermOnline:CG18657
GO:GO:2000289 Uniprot:Q24567
Length = 726
Score = 495 (179.3 bits), Expect = 5.3e-81, Sum P(2) = 5.3e-81
Identities = 97/172 (56%), Positives = 111/172 (64%)
Query: 26 DPCYENGR-PRRCIPDFVNAAFGQEVKVNSVCGLESPERYC---DTSGACHVCDAGSPRG 81
DPCY PR CIPDFVNAA+ V +S CG +RYC D +CH CD P
Sbjct: 38 DPCYNKAHEPRACIPDFVNAAYDAPVVASSTCGSSGAQRYCEYQDHERSCHTCDMTDPLR 97
Query: 82 RFPAEYLTDLNNPSNVTCWRSEAQTSVNSLSASPDNVTLTLSLGKKFELTYISLSFCPKS 141
FPA LTDLNN +NVTCWRSE T S DNVTLTLSLGKKFELTY+ L CP +
Sbjct: 98 SFPARSLTDLNNSNNVTCWRSEPVTG------SGDNVTLTLSLGKKFELTYVILQLCPHA 151
Query: 142 IKPDSLAIYKSQDFGKSWQPLQFYSSQCKKLYGRTATGVISRGNEQEALCTD 193
+PDS+ IYKS D G SWQP QF+SSQC++L+GR A R NE EA C+D
Sbjct: 152 PRPDSMVIYKSTDHGLSWQPFQFFSSQCRRLFGRPARQSTGRHNEHEARCSD 203
Score = 341 (125.1 bits), Expect = 5.3e-81, Sum P(2) = 5.3e-81
Identities = 65/127 (51%), Positives = 80/127 (62%)
Query: 199 GGRCKCNGHASRCIKSPQGELVCECRHNTAGKDCEKCKPFFSDRPWGRATVYDANECKGG 258
GGRCKCNGHAS+C G+L CEC HNTAG+DCE+CKPF DRPW RAT +ANECK
Sbjct: 310 GGRCKCNGHASKCSTDASGQLNCECSHNTAGRDCERCKPFHFDRPWARATAKEANECK-- 367
Query: 259 RCKCNGHASRC------IKSPQGAL--VCE-CRHNTAGKDCEKCKP-FFSD--RPWGRAT 306
C CN HA +C + QG VC+ CRH+T G++C +CK F+ D +P
Sbjct: 368 ECNCNKHARQCRFNMEIFRLSQGVSGGVCQNCRHSTTGRNCHQCKEGFYRDATKPLTHRK 427
Query: 307 VYDANEC 313
V A +C
Sbjct: 428 VCKACDC 434
Score = 252 (93.8 bits), Expect = 1.3e-71, Sum P(2) = 1.3e-71
Identities = 41/58 (70%), Positives = 45/58 (77%)
Query: 257 GGRCKCNGHASRCIKSPQGALVCECRHNTAGKDCEKCKPFFSDRPWGRATVYDANECK 314
GGRCKCNGHAS+C G L CEC HNTAG+DCE+CKPF DRPW RAT +ANECK
Sbjct: 310 GGRCKCNGHASKCSTDASGQLNCECSHNTAGRDCERCKPFHFDRPWARATAKEANECK 367
Score = 127 (49.8 bits), Expect = 1.9e-58, Sum P(2) = 1.9e-58
Identities = 33/115 (28%), Positives = 48/115 (41%)
Query: 189 ALCTDRHKKQGGRCKCNGHASRC------IKSPQGEL--VCE-CRHNTAGKDCEKCKP-F 238
A T + + C CN HA +C + QG VC+ CRH+T G++C +CK F
Sbjct: 356 ARATAKEANECKECNCNKHARQCRFNMEIFRLSQGVSGGVCQNCRHSTTGRNCHQCKEGF 415
Query: 239 FSDRPWGRATVYDANECKGGRCKCNGHASRCIKSPQGALVCECRHNTAGKDCEKC 293
+ D + CK C G + + S G C C+ G C +C
Sbjct: 416 YRD---ATKPLTHRKVCKACDCHPIGSSGKICNSTSGQ--CPCKDGVTGLTCNRC 465
Score = 61 (26.5 bits), Expect = 1.6e-51, Sum P(2) = 1.6e-51
Identities = 26/102 (25%), Positives = 35/102 (34%)
Query: 190 LCTD-RHKKQGGRC-KCN-GHASRCIKSPQGELVCE-CRHNTAGKDCEKCKPFFSDRPW- 244
+C + RH G C +C G K VC+ C + G + C P
Sbjct: 395 VCQNCRHSTTGRNCHQCKEGFYRDATKPLTHRKVCKACDCHPIGSSGKICNSTSGQCPCK 454
Query: 245 GRATVYDANECKGGRCKCNGHASRCIKSPQGALVCECRHNTA 286
T N C G + H + CIK P + NTA
Sbjct: 455 DGVTGLTCNRCARGYQQSRSHIAPCIKQPPRMINMLDTQNTA 496
>FB|FBgn0015774 [details] [associations]
symbol:NetB "Netrin-B" species:7227 "Drosophila melanogaster"
[GO:0005576 "extracellular region" evidence=ISS] [GO:0016200
"synaptic target attraction" evidence=TAS] [GO:0007411 "axon
guidance" evidence=IGI;ISS;NAS] [GO:0005578 "proteinaceous
extracellular matrix" evidence=ISS] [GO:0070983 "dendrite guidance"
evidence=IGI] [GO:0008045 "motor neuron axon guidance"
evidence=IMP] [GO:0007432 "salivary gland boundary specification"
evidence=IMP] [GO:0008039 "synaptic target recognition"
evidence=IMP] [GO:0008347 "glial cell migration" evidence=IMP]
[GO:2000289 "regulation of photoreceptor cell axon guidance"
evidence=IMP] InterPro:IPR001134 PROSITE:PS50189 EMBL:AE014298
GO:GO:0005578 PROSITE:PS00022 GO:GO:0008045 InterPro:IPR002049
InterPro:IPR008993 Pfam:PF00053 SMART:SM00180 SUPFAM:SSF50242
PROSITE:PS01248 PROSITE:PS50027 GO:GO:0008347 InterPro:IPR018933
Pfam:PF01759 GO:GO:0070983 GO:GO:0007432 SMART:SM00643
GO:GO:0016200 InterPro:IPR008211 Pfam:PF00055 SMART:SM00136
PROSITE:PS51117 eggNOG:NOG244580 GeneTree:ENSGT00700000104042
GO:GO:2000289 EMBL:U60317 EMBL:U63737 RefSeq:NP_001162753.1
RefSeq:NP_001162754.1 RefSeq:NP_001162755.1 RefSeq:NP_001245668.1
RefSeq:NP_001245669.1 RefSeq:NP_511155.1 UniGene:Dm.3913
ProteinModelPortal:Q24568 SMR:Q24568 MINT:MINT-1334555
STRING:Q24568 PRIDE:Q24568 EnsemblMetazoa:FBtr0073940
EnsemblMetazoa:FBtr0302016 EnsemblMetazoa:FBtr0302017
EnsemblMetazoa:FBtr0302018 EnsemblMetazoa:FBtr0304874
EnsemblMetazoa:FBtr0304875 GeneID:32400 KEGG:dme:Dmel_CG10521
CTD:32400 FlyBase:FBgn0015774 InParanoid:Q24568 OMA:NECKMCQ
OrthoDB:EOG43R22P PhylomeDB:Q24568 GenomeRNAi:32400 NextBio:778273
Bgee:Q24568 GermOnline:CG10521 Uniprot:Q24568
Length = 793
Score = 563 (203.2 bits), Expect = 2.8e-78, Sum P(2) = 2.8e-78
Identities = 111/202 (54%), Positives = 139/202 (68%)
Query: 7 LCVPLLIGAVCGEKI-DLNS-DPCYENGRPRRCIPDFVNAAFGQEVKVNSVCGLESPERY 64
L +P+++ G ++S DPCY G+PR+C+P FVNAA+G V+ +SVCG + PERY
Sbjct: 11 LLLPIILALAIGSSAAGISSNDPCYFEGKPRKCLPSFVNAAYGNPVQASSVCGAQQPERY 70
Query: 65 CD-----TSGACHVCDAGSPRGRFPAEYLTDLNNPSNVTCWRSEAQTSVNSL-SASPDNV 118
C+ +G C C+ + R+ LTDLNNPSNVTCWRS A + SA PDNV
Sbjct: 71 CELLRDGNAGECRSCE----QQRYGPAALTDLNNPSNVTCWRSGAVNVPHDPDSAPPDNV 126
Query: 119 TLTLSLGKKFELTYISLSFCPKSIKPDSLAIYKSQDFGKSWQPLQFYSSQCKKLYGRTAT 178
TLTLSLGKK+ELTYISLSFCP+S +PDSLAI+KS DFG++WQP QFYSSQC+K YGR
Sbjct: 127 TLTLSLGKKYELTYISLSFCPRSPRPDSLAIFKSSDFGQTWQPFQFYSSQCQKFYGRPDR 186
Query: 179 GVISRGNEQEALCTDRHKKQGG 200
IS+ NEQEA C + GG
Sbjct: 187 AKISKFNEQEARCINSQHDTGG 208
Score = 243 (90.6 bits), Expect = 2.8e-78, Sum P(2) = 2.8e-78
Identities = 45/91 (49%), Positives = 59/91 (64%)
Query: 219 LVCECRHNTAGKDCEKCKPFFSDRPWGRATVYDANECKGGRCKCNGHASRC-----IKSP 273
+ C C+HNTAG +CE+CKPF+ DRPWGRAT DANECK C+CNGHA RC +
Sbjct: 459 MTCACKHNTAGPECERCKPFYFDRPWGRATDNDANECK--MCQCNGHARRCRFNLELYKL 516
Query: 274 QGAL---VC-ECRHNTAGKDCEKCKP-FFSD 299
G + VC C+H+T G+ C C+ ++ D
Sbjct: 517 SGRVSGGVCYNCQHDTTGRYCHYCREGYYRD 547
Score = 175 (66.7 bits), Expect = 4.2e-71, Sum P(2) = 4.2e-71
Identities = 30/51 (58%), Positives = 37/51 (72%)
Query: 265 HASRCIK-SPQGALVCECRHNTAGKDCEKCKPFFSDRPWGRATVYDANECK 314
H R + S + + C C+HNTAG +CE+CKPF+ DRPWGRAT DANECK
Sbjct: 446 HFGRSTQMSAKLTMTCACKHNTAGPECERCKPFYFDRPWGRATDNDANECK 496
Score = 118 (46.6 bits), Expect = 4.2e-65, Sum P(2) = 4.2e-65
Identities = 34/116 (29%), Positives = 49/116 (42%)
Query: 192 TDRHKKQGGRCKCNGHASRC-----IKSPQGEL---VC-ECRHNTAGKDCEKCKP-FFSD 241
TD + C+CNGHA RC + G + VC C+H+T G+ C C+ ++ D
Sbjct: 488 TDNDANECKMCQCNGHARRCRFNLELYKLSGRVSGGVCYNCQHDTTGRYCHYCREGYYRD 547
Query: 242 --RPWGRATVYDANECKGGRCKCN--GHASRCIKSPQGALVCECRHNTAGKDCEKC 293
+P V CK RC C+ G + G C C+ G C +C
Sbjct: 548 ATKPPNHRKV-----CK--RCDCHPVGSTGKTCNHLSGQ--CPCKEGVTGLTCNRC 594
Score = 89 (36.4 bits), Expect = 4.8e-62, Sum P(2) = 4.8e-62
Identities = 23/72 (31%), Positives = 31/72 (43%)
Query: 199 GGRCKCNGHASRCIKSPQGELVCECRHNTAGKDCEK-CKPFFSDRPWGRATVYDANECKG 257
GGRCKCNGHAS C+ + G+D + P ++ +GR+T A
Sbjct: 402 GGRCKCNGHASECVATVSSGSGTALSDQDDGQDEDTPSAPSLANH-FGRSTQMSAKLTMT 460
Query: 258 GRCKCNGHASRC 269
CK N C
Sbjct: 461 CACKHNTAGPEC 472
Score = 81 (33.6 bits), Expect = 3.3e-61, Sum P(2) = 3.3e-61
Identities = 19/55 (34%), Positives = 27/55 (49%)
Query: 257 GGRCKCNGHASRCIKSPQGALVCECRHNTAGKDCEK-CKPFFSDRPWGRATVYDA 310
GGRCKCNGHAS C+ + G+D + P ++ +GR+T A
Sbjct: 402 GGRCKCNGHASECVATVSSGSGTALSDQDDGQDEDTPSAPSLANH-FGRSTQMSA 455
Score = 71 (30.1 bits), Expect = 3.8e-60, Sum P(2) = 3.8e-60
Identities = 25/98 (25%), Positives = 34/98 (34%)
Query: 184 GNEQEALCTD-RHKKQGGRCK-CN-GHASRCIKSPQGELVCE-CRHNTAGKDCEKCKPFF 239
G +C + +H G C C G+ K P VC+ C + G + C
Sbjct: 518 GRVSGGVCYNCQHDTTGRYCHYCREGYYRDATKPPNHRKVCKRCDCHPVGSTGKTCNHLS 577
Query: 240 SDRPWGRA-TVYDANECKGGRCKCNGHASRCIKSPQGA 276
P T N C G + H + CIK P A
Sbjct: 578 GQCPCKEGVTGLTCNRCARGYQQTRSHVAPCIKVPTNA 615
Score = 45 (20.9 bits), Expect = 1.2e-10, Sum P(2) = 1.2e-10
Identities = 17/58 (29%), Positives = 24/58 (41%)
Query: 208 ASRCIKSPQGELVCEC-RHNTAGKDCEKCKPFFSDRPWGRATVYDANECKGGRCKCNG 264
AS + Q E CE R AG +C C+ + +G A + D N C +G
Sbjct: 58 ASSVCGAQQPERYCELLRDGNAG-ECRSCE----QQRYGPAALTDLNNPSNVTCWRSG 110
Score = 41 (19.5 bits), Expect = 5.4e-57, Sum P(2) = 5.4e-57
Identities = 7/34 (20%), Positives = 15/34 (44%)
Query: 248 TVYDANECKGGRCKCNGHASRCIKSPQGALVCEC 281
T++ N G G + + P+ ++ C+C
Sbjct: 707 TIFKRNPMSGTTSSLLGRGNMMLLVPRKSIECQC 740
>WB|WBGene00006746 [details] [associations]
symbol:unc-6 species:6239 "Caenorhabditis elegans"
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0040011
"locomotion" evidence=IMP] [GO:0007411 "axon guidance"
evidence=IMP] [GO:0030163 "protein catabolic process" evidence=IMP]
[GO:0008078 "mesodermal cell migration" evidence=IMP] [GO:0033563
"dorsal/ventral axon guidance" evidence=IGI;IMP] [GO:0030334
"regulation of cell migration" evidence=IGI;IMP] [GO:0035262 "gonad
morphogenesis" evidence=IGI;IMP] [GO:0005737 "cytoplasm"
evidence=IDA] [GO:0030424 "axon" evidence=IDA] [GO:0005102
"receptor binding" evidence=ISS] [GO:0008045 "motor neuron axon
guidance" evidence=IMP] [GO:0005604 "basement membrane"
evidence=IDA] [GO:0031175 "neuron projection development"
evidence=IMP] Reactome:REACT_86739 InterPro:IPR001134
PROSITE:PS50189 GO:GO:0005737 GO:GO:0030424 GO:GO:0005102
InterPro:IPR013032 PROSITE:PS00022 GO:GO:0030334 GO:GO:0008045
GO:GO:0030163 InterPro:IPR002049 InterPro:IPR008993 Pfam:PF00053
SMART:SM00180 SUPFAM:SSF50242 PROSITE:PS01248 PROSITE:PS50027
GO:GO:0005604 GO:GO:0008078 InterPro:IPR018933 Pfam:PF01759
GO:GO:0035262 SMART:SM00643 GO:GO:0033563 InterPro:IPR008211
Pfam:PF00055 SMART:SM00136 PROSITE:PS51117 KO:K06843
eggNOG:NOG244580 HOGENOM:HOG000286017 CTD:180961
GeneTree:ENSGT00700000104042 EMBL:M80241 EMBL:FO080932 PIR:JH0799
RefSeq:NP_509165.1 ProteinModelPortal:P34710 SMR:P34710
DIP:DIP-24693N MINT:MINT-1057956 STRING:P34710 PaxDb:P34710
EnsemblMetazoa:F41C6.1.1 EnsemblMetazoa:F41C6.1.2 GeneID:180961
KEGG:cel:CELE_F41C6.1 UCSC:F41C6.1.1 WormBase:F41C6.1
InParanoid:P34710 OMA:RAHPASY NextBio:911748 Uniprot:P34710
Length = 612
Score = 456 (165.6 bits), Expect = 6.6e-77, Sum P(2) = 6.6e-77
Identities = 88/179 (49%), Positives = 118/179 (65%)
Query: 26 DPCYEN-GRPRRCIPDFVNAAFGQEVKVNSVCGLESPERYCDTSGA--------CHVCDA 76
DPC+++ GRP RC+P+F+NAAFG+ V + CG P++YC C CDA
Sbjct: 35 DPCHDHTGRPVRCVPEFINAAFGKPVIASDTCGTNRPDKYCTVKEGPDGIIREQCDTCDA 94
Query: 77 GSPRGRFPAEYLTDLNNPSNVTCWRSEAQTSVNSLSASPDNVTLTLSLGKKFELTYISLS 136
+ PA LTDLN+ N+TCW V++ S SP NV+LTLSLGKKFELTY+S+
Sbjct: 95 RNHFQSHPASLLTDLNSIGNMTCW-------VSTPSLSPQNVSLTLSLGKKFELTYVSMH 147
Query: 137 FCPKSIKPDSLAIYKSQDFGKSWQPLQFYSSQCKKLYGRTATGVISRGNEQEALCTDRH 195
FC + PDS+A+YKS DFGK+W P QFYSS+C++++GR I++ NEQEA+CT H
Sbjct: 148 FCSRL--PDSMALYKSADFGKTWTPFQFYSSECRRIFGRDPDVSITKSNEQEAVCTASH 204
Score = 337 (123.7 bits), Expect = 6.6e-77, Sum P(2) = 6.6e-77
Identities = 69/142 (48%), Positives = 80/142 (56%)
Query: 171 KLYGRTATGVISRGNEQEALCTDRHKKQ------GGRCKCNGHASRCIKSPQGELVCECR 224
+LYG + V S GNE + R+ GGRCKCNGHASRCI G C+C+
Sbjct: 255 ELYG-LSNDVNSYGNETDDEVKQRYFYSMGELAVGGRCKCNGHASRCIFDKMGRYTCDCK 313
Query: 225 HNTAGKDCEKCKPFFSDRPWGRATVYDANECKGGRCKCNGHASRC--------IKSPQGA 276
HNTAG +CE CKPF DRPWGRAT AN C C CN HA RC + +
Sbjct: 314 HNTAGTECEMCKPFHYDRPWGRATANSANSCVA--CNCNQHAKRCRFDAELFRLSGNRSG 371
Query: 277 LVC-ECRHNTAGKDCEKCKPFF 297
VC CRHNTAG++C CKP F
Sbjct: 372 GVCLNCRHNTAGRNCHLCKPGF 393
Score = 241 (89.9 bits), Expect = 1.4e-69, Sum P(3) = 1.4e-69
Identities = 39/57 (68%), Positives = 42/57 (73%)
Query: 257 GGRCKCNGHASRCIKSPQGALVCECRHNTAGKDCEKCKPFFSDRPWGRATVYDANEC 313
GGRCKCNGHASRCI G C+C+HNTAG +CE CKPF DRPWGRAT AN C
Sbjct: 288 GGRCKCNGHASRCIFDKMGRYTCDCKHNTAGTECEMCKPFHYDRPWGRATANSANSC 344
Score = 74 (31.1 bits), Expect = 3.3e-49, Sum P(2) = 3.3e-49
Identities = 29/118 (24%), Positives = 38/118 (32%)
Query: 184 GNEQEALCTD-RHKKQGGRCK-CNGHASRCIKSPQGELV----CECRH-NTAGKDCEKCK 236
GN +C + RH G C C R P C C + GK C +
Sbjct: 367 GNRSGGVCLNCRHNTAGRNCHLCKPGFVRDTSLPMTHRKACKSCGCHPVGSLGKSCNQSS 426
Query: 237 PFFSDRPWGRATVYDANECKGGRCKCNGHASRCIKSPQGALVCECRHNTAGKDCEKCK 294
+P T N C G + + CIK P A H+ C KC+
Sbjct: 427 GQCVCKPGVTGTT--CNRCAKGYQQSRSTVTPCIKIPTKADFIGSSHSEEQDQCSKCR 482
Score = 39 (18.8 bits), Expect = 1.4e-69, Sum P(3) = 1.4e-69
Identities = 10/31 (32%), Positives = 12/31 (38%)
Query: 213 KSPQGELVCECRHNTAGKDCEKCKPFFSDRP 243
KS + E VC H PF +RP
Sbjct: 192 KSNEQEAVCTASHIMGPGGNRVAFPFLENRP 222
>UNIPROTKB|P34710 [details] [associations]
symbol:unc-6 "Netrin unc-6" species:6239 "Caenorhabditis
elegans" [GO:0005576 "extracellular region" evidence=TAS]
Reactome:REACT_86739 InterPro:IPR001134 PROSITE:PS50189
GO:GO:0005737 GO:GO:0030424 GO:GO:0005102 InterPro:IPR013032
PROSITE:PS00022 GO:GO:0030334 GO:GO:0008045 GO:GO:0030163
InterPro:IPR002049 InterPro:IPR008993 Pfam:PF00053 SMART:SM00180
SUPFAM:SSF50242 PROSITE:PS01248 PROSITE:PS50027 GO:GO:0005604
GO:GO:0008078 InterPro:IPR018933 Pfam:PF01759 GO:GO:0035262
SMART:SM00643 GO:GO:0033563 InterPro:IPR008211 Pfam:PF00055
SMART:SM00136 PROSITE:PS51117 KO:K06843 eggNOG:NOG244580
HOGENOM:HOG000286017 CTD:180961 GeneTree:ENSGT00700000104042
EMBL:M80241 EMBL:FO080932 PIR:JH0799 RefSeq:NP_509165.1
ProteinModelPortal:P34710 SMR:P34710 DIP:DIP-24693N
MINT:MINT-1057956 STRING:P34710 PaxDb:P34710
EnsemblMetazoa:F41C6.1.1 EnsemblMetazoa:F41C6.1.2 GeneID:180961
KEGG:cel:CELE_F41C6.1 UCSC:F41C6.1.1 WormBase:F41C6.1
InParanoid:P34710 OMA:RAHPASY NextBio:911748 Uniprot:P34710
Length = 612
Score = 456 (165.6 bits), Expect = 6.6e-77, Sum P(2) = 6.6e-77
Identities = 88/179 (49%), Positives = 118/179 (65%)
Query: 26 DPCYEN-GRPRRCIPDFVNAAFGQEVKVNSVCGLESPERYCDTSGA--------CHVCDA 76
DPC+++ GRP RC+P+F+NAAFG+ V + CG P++YC C CDA
Sbjct: 35 DPCHDHTGRPVRCVPEFINAAFGKPVIASDTCGTNRPDKYCTVKEGPDGIIREQCDTCDA 94
Query: 77 GSPRGRFPAEYLTDLNNPSNVTCWRSEAQTSVNSLSASPDNVTLTLSLGKKFELTYISLS 136
+ PA LTDLN+ N+TCW V++ S SP NV+LTLSLGKKFELTY+S+
Sbjct: 95 RNHFQSHPASLLTDLNSIGNMTCW-------VSTPSLSPQNVSLTLSLGKKFELTYVSMH 147
Query: 137 FCPKSIKPDSLAIYKSQDFGKSWQPLQFYSSQCKKLYGRTATGVISRGNEQEALCTDRH 195
FC + PDS+A+YKS DFGK+W P QFYSS+C++++GR I++ NEQEA+CT H
Sbjct: 148 FCSRL--PDSMALYKSADFGKTWTPFQFYSSECRRIFGRDPDVSITKSNEQEAVCTASH 204
Score = 337 (123.7 bits), Expect = 6.6e-77, Sum P(2) = 6.6e-77
Identities = 69/142 (48%), Positives = 80/142 (56%)
Query: 171 KLYGRTATGVISRGNEQEALCTDRHKKQ------GGRCKCNGHASRCIKSPQGELVCECR 224
+LYG + V S GNE + R+ GGRCKCNGHASRCI G C+C+
Sbjct: 255 ELYG-LSNDVNSYGNETDDEVKQRYFYSMGELAVGGRCKCNGHASRCIFDKMGRYTCDCK 313
Query: 225 HNTAGKDCEKCKPFFSDRPWGRATVYDANECKGGRCKCNGHASRC--------IKSPQGA 276
HNTAG +CE CKPF DRPWGRAT AN C C CN HA RC + +
Sbjct: 314 HNTAGTECEMCKPFHYDRPWGRATANSANSCVA--CNCNQHAKRCRFDAELFRLSGNRSG 371
Query: 277 LVC-ECRHNTAGKDCEKCKPFF 297
VC CRHNTAG++C CKP F
Sbjct: 372 GVCLNCRHNTAGRNCHLCKPGF 393
Score = 241 (89.9 bits), Expect = 1.4e-69, Sum P(3) = 1.4e-69
Identities = 39/57 (68%), Positives = 42/57 (73%)
Query: 257 GGRCKCNGHASRCIKSPQGALVCECRHNTAGKDCEKCKPFFSDRPWGRATVYDANEC 313
GGRCKCNGHASRCI G C+C+HNTAG +CE CKPF DRPWGRAT AN C
Sbjct: 288 GGRCKCNGHASRCIFDKMGRYTCDCKHNTAGTECEMCKPFHYDRPWGRATANSANSC 344
Score = 74 (31.1 bits), Expect = 3.3e-49, Sum P(2) = 3.3e-49
Identities = 29/118 (24%), Positives = 38/118 (32%)
Query: 184 GNEQEALCTD-RHKKQGGRCK-CNGHASRCIKSPQGELV----CECRH-NTAGKDCEKCK 236
GN +C + RH G C C R P C C + GK C +
Sbjct: 367 GNRSGGVCLNCRHNTAGRNCHLCKPGFVRDTSLPMTHRKACKSCGCHPVGSLGKSCNQSS 426
Query: 237 PFFSDRPWGRATVYDANECKGGRCKCNGHASRCIKSPQGALVCECRHNTAGKDCEKCK 294
+P T N C G + + CIK P A H+ C KC+
Sbjct: 427 GQCVCKPGVTGTT--CNRCAKGYQQSRSTVTPCIKIPTKADFIGSSHSEEQDQCSKCR 482
Score = 39 (18.8 bits), Expect = 1.4e-69, Sum P(3) = 1.4e-69
Identities = 10/31 (32%), Positives = 12/31 (38%)
Query: 213 KSPQGELVCECRHNTAGKDCEKCKPFFSDRP 243
KS + E VC H PF +RP
Sbjct: 192 KSNEQEAVCTASHIMGPGGNRVAFPFLENRP 222
>UNIPROTKB|Q90922 [details] [associations]
symbol:NTN1 "Netrin-1" species:9031 "Gallus gallus"
[GO:0005578 "proteinaceous extracellular matrix" evidence=IEA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0071944 "cell
periphery" evidence=IDA] InterPro:IPR001134 PROSITE:PS50189
GO:GO:0005578 PROSITE:PS00022 GO:GO:0071944 InterPro:IPR002049
InterPro:IPR008993 Pfam:PF00053 SMART:SM00180 SUPFAM:SSF50242
PROSITE:PS01248 PROSITE:PS50027 InterPro:IPR018933 Pfam:PF01759
SMART:SM00643 InterPro:IPR008211 Pfam:PF00055 SMART:SM00136
PROSITE:PS51117 EMBL:L34549 IPI:IPI00570611 PIR:A54665
RefSeq:NP_990750.1 UniGene:Gga.794 ProteinModelPortal:Q90922
IntAct:Q90922 STRING:Q90922 GeneID:396389 KEGG:gga:396389
eggNOG:NOG237372 HOVERGEN:HBG006464 KO:K06843 NextBio:20816431
Uniprot:Q90922
Length = 606
Score = 720 (258.5 bits), Expect = 3.7e-71, P = 3.7e-71
Identities = 152/314 (48%), Positives = 198/314 (63%)
Query: 26 DPCY-ENGRPRRCIPDFVNAAFGQEVKVNSVCGLESPERYCDTS--G-----ACHVCDAG 77
DPCY E+G PRRCIPDFVN+AFG+EVKV+S CG + P RYC + G +CH+C+A
Sbjct: 41 DPCYDEHGLPRRCIPDFVNSAFGKEVKVSSTCG-KPPSRYCVVTEKGEEQVRSCHLCNAS 99
Query: 78 SPRGRFPAEYLTDLNNPSNVTCWRSEAQTSVNSLSASPDNVTLTLSLGKKFELTYISLSF 137
P+ P +LTDLNNP N+TCW+S++ P NVTLTLSLGKKFE+TY+SL F
Sbjct: 100 DPKRAHPPSFLTDLNNPHNLTCWQSDSYVQY------PHNVTLTLSLGKKFEVTYVSLQF 153
Query: 138 CPKSIKPDSLAIYKSQDFGKSWQPLQFYSSQCKKLYGRTATGVISRGNEQEALCTDRHKK 197
C S +P+S+AIYKS D+GK+W P QFYS+QC+K+Y + + I++ NEQEA+CTD H
Sbjct: 154 C--SPRPESMAIYKSMDYGKTWVPFQFYSTQCRKMYNKPSRAAITKQNEQEAICTDSHTD 211
Query: 198 ----QGGRCK---CNGH--ASRCIKSP--QGEL------VCECRHNTAGKDCEKCKPFFS 240
GG +G A SP Q + V R +T G + E
Sbjct: 212 VRPLSGGLIAFSTLDGRPTAHDFDNSPVLQDWVTATDIKVTFSRLHTFGDENEDDSELAR 271
Query: 241 DRPWGRATVYDANECK-GGRCKCNGHASRCIKSPQGALVCECRHNTAGKDCEKCKPFFSD 299
D + Y ++ + GGRCKCNGHASRC++ LVC+C+HNTAG +C++CKPF D
Sbjct: 272 D-----SYFYAVSDLQVGGRCKCNGHASRCVRDRDDNLVCDCKHNTAGPECDRCKPFHYD 326
Query: 300 RPWGRATVYDANEC 313
RPW RAT +ANEC
Sbjct: 327 RPWQRATAREANEC 340
Score = 325 (119.5 bits), Expect = 6.4e-33, Sum P(2) = 6.4e-33
Identities = 59/111 (53%), Positives = 71/111 (63%)
Query: 199 GGRCKCNGHASRCIKSPQGELVCECRHNTAGKDCEKCKPFFSDRPWGRATVYDANECKGG 258
GGRCKCNGHASRC++ LVC+C+HNTAG +C++CKPF DRPW RAT +ANEC
Sbjct: 284 GGRCKCNGHASRCVRDRDDNLVCDCKHNTAGPECDRCKPFHYDRPWQRATAREANECVA- 342
Query: 259 RCKCNGHASRC--------IKSPQGALVC-ECRHNTAGKDCEKCKP-FFSD 299
C CN HA RC + + VC CRHNTAG+ C CK F+ D
Sbjct: 343 -CNCNLHARRCRFNMELYKLSGRKSGGVCLNCRHNTAGRHCHYCKEGFYRD 392
Score = 121 (47.7 bits), Expect = 1.4e-06, Sum P(2) = 1.4e-06
Identities = 35/114 (30%), Positives = 45/114 (39%)
Query: 192 TDRHKKQGGRCKCNGHASRC--------IKSPQGELVC-ECRHNTAGKDCEKCKP-FFSD 241
T R + C CN HA RC + + VC CRHNTAG+ C CK F+ D
Sbjct: 333 TAREANECVACNCNLHARRCRFNMELYKLSGRKSGGVCLNCRHNTAGRHCHYCKEGFYRD 392
Query: 242 RPWGRATVYDANECKGGRCKCN--GHASRCIKSPQGALVCECRHNTAGKDCEKC 293
+ CK C C+ G A + G C C+ G C +C
Sbjct: 393 LS---KPISHRKACK--ECDCHPVGAAGQTCNQTTGQ--CPCKDGVTGITCNRC 439
Score = 63 (27.2 bits), Expect = 6.4e-33, Sum P(2) = 6.4e-33
Identities = 37/164 (22%), Positives = 66/164 (40%)
Query: 2 HFLKLLCVPLLIGAVCGEKIDLNSDPCYENGRP--RRCIPDFVNAAFGQEVKVNSVCGLE 59
H L C+P + + G+++ ++S C G+P R C+ V ++V+ +C
Sbjct: 47 HGLPRRCIPDFVNSAFGKEVKVSST-C---GKPPSRYCV---VTEKGEEQVRSCHLCNAS 99
Query: 60 SPERYCDTSGACHVCDAGSPRGRFPAEYLTDLNNPSNVTCWRSEAQ----TSVNSLSASP 115
P+R S + D +P + + + P NVT S + T V+ SP
Sbjct: 100 DPKRAHPPS---FLTDLNNPHNLTCWQSDSYVQYPHNVTLTLSLGKKFEVTYVSLQFCSP 156
Query: 116 DNVTLTLSLGKKFELTYISLSF----CPKSI-KPDSLAIYKSQD 154
++ + + T++ F C K KP AI K +
Sbjct: 157 RPESMAIYKSMDYGKTWVPFQFYSTQCRKMYNKPSRAAITKQNE 200
>UNIPROTKB|Q2HXW4 [details] [associations]
symbol:NTN1 "Netrin-1" species:9823 "Sus scrofa"
[GO:0005578 "proteinaceous extracellular matrix" evidence=IEA]
[GO:0006915 "apoptotic process" evidence=IEA] InterPro:IPR001134
PROSITE:PS50189 GO:GO:0006915 GO:GO:0005578 InterPro:IPR013032
PROSITE:PS00022 PROSITE:PS01186 InterPro:IPR002049
InterPro:IPR008993 Pfam:PF00053 SMART:SM00180 SUPFAM:SSF50242
PROSITE:PS01248 PROSITE:PS50027 InterPro:IPR018933 Pfam:PF01759
SMART:SM00643 InterPro:IPR008211 Pfam:PF00055 SMART:SM00136
PROSITE:PS51117 HOVERGEN:HBG006464 KO:K06843 eggNOG:NOG244580
HOGENOM:HOG000286017 OrthoDB:EOG4H19V9 EMBL:DQ368597
RefSeq:NP_001038013.1 UniGene:Ssc.22870 ProteinModelPortal:Q2HXW4
STRING:Q2HXW4 GeneID:733599 KEGG:ssc:733599 CTD:180961
Uniprot:Q2HXW4
Length = 600
Score = 717 (257.5 bits), Expect = 7.7e-71, P = 7.7e-71
Identities = 155/314 (49%), Positives = 197/314 (62%)
Query: 26 DPCY-ENGRPRRCIPDFVNAAFGQEVKVNSVCGLESPERYCDTS--G-----ACHVCDAG 77
DPC ENG PRRCIPDFVNAAFG++V+V+S CG P RYC S G +CH+C+A
Sbjct: 39 DPCSDENGHPRRCIPDFVNAAFGKDVRVSSTCG-RPPARYCVVSERGEERLRSCHLCNAS 97
Query: 78 SPRGRFPAEYLTDLNNPSNVTCWRSEAQTSVNSLSASPDNVTLTLSLGKKFELTYISLSF 137
P+ P +LTDLNNP N+TCW+SE N L P NVTLTLSLGKKFE+TY+SL F
Sbjct: 98 DPKKAHPPAFLTDLNNPHNLTCWQSE-----NYLQF-PHNVTLTLSLGKKFEVTYVSLQF 151
Query: 138 CPKSIKPDSLAIYKSQDFGKSWQPLQFYSSQCKKLYGRTATGVISRGNEQEALCTDRHKK 197
C S +P+S+AIYKS D+G++W P QFYS+QC+K+Y R I++ NEQEA+CTD H
Sbjct: 152 C--SPRPESMAIYKSMDYGRTWVPFQFYSTQCRKMYNRPHRAPITKQNEQEAVCTDSHTD 209
Query: 198 Q----GGRCK---CNGHASR--CIKSP--QGEL------VCECRHNTAGKDCEKCKPFFS 240
GG +G S SP Q + V R +T G + E
Sbjct: 210 MRPLSGGLIAFSTLDGRPSAHDFDNSPVLQDWVTATDIRVAFSRLHTFGDENEDDSELAR 269
Query: 241 DRPWGRATVYDANECK-GGRCKCNGHASRCIKSPQGALVCECRHNTAGKDCEKCKPFFSD 299
D + Y ++ + GGRCKCNGHA+RC++ +LVC+CRHNTAG +C++CKPF D
Sbjct: 270 D-----SYFYAVSDLQVGGRCKCNGHAARCVRDRDDSLVCDCRHNTAGPECDRCKPFHYD 324
Query: 300 RPWGRATVYDANEC 313
RPW RAT +ANEC
Sbjct: 325 RPWQRATAREANEC 338
Score = 325 (119.5 bits), Expect = 1.3e-28, P = 1.3e-28
Identities = 59/111 (53%), Positives = 71/111 (63%)
Query: 199 GGRCKCNGHASRCIKSPQGELVCECRHNTAGKDCEKCKPFFSDRPWGRATVYDANECKGG 258
GGRCKCNGHA+RC++ LVC+CRHNTAG +C++CKPF DRPW RAT +ANEC
Sbjct: 282 GGRCKCNGHAARCVRDRDDSLVCDCRHNTAGPECDRCKPFHYDRPWQRATAREANECVA- 340
Query: 259 RCKCNGHASRC--------IKSPQGALVC-ECRHNTAGKDCEKCKP-FFSD 299
C CN HA RC + + VC CRHNTAG+ C CK +F D
Sbjct: 341 -CNCNLHARRCRFNMELYKLSGRKSGGVCLNCRHNTAGRHCHYCKEGYFRD 390
Score = 128 (50.1 bits), Expect = 3.6e-05, P = 3.6e-05
Identities = 35/112 (31%), Positives = 45/112 (40%)
Query: 192 TDRHKKQGGRCKCNGHASRC--------IKSPQGELVC-ECRHNTAGKDCEKCKP-FFSD 241
T R + C CN HA RC + + VC CRHNTAG+ C CK +F D
Sbjct: 331 TAREANECVACNCNLHARRCRFNMELYKLSGRKSGGVCLNCRHNTAGRHCHYCKEGYFRD 390
Query: 242 RPWGRATVYDANECKGGRCKCNGHASRCIKSPQGALVCECRHNTAGKDCEKC 293
G+ + CK C G A + G C C+ G C +C
Sbjct: 391 L--GKPITH-RKACKACDCHPVGAAGKTCNQTTGQ--CPCKDGVTGVTCNRC 437
>UNIPROTKB|F1N0C7 [details] [associations]
symbol:NTN1 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0060603 "mammary gland duct morphogenesis"
evidence=IEA] [GO:0045773 "positive regulation of axon extension"
evidence=IEA] [GO:0042472 "inner ear morphogenesis" evidence=IEA]
[GO:0040023 "establishment of nucleus localization" evidence=IEA]
[GO:0030517 "negative regulation of axon extension" evidence=IEA]
[GO:0030334 "regulation of cell migration" evidence=IEA]
[GO:0016337 "cell-cell adhesion" evidence=IEA] [GO:0008284
"positive regulation of cell proliferation" evidence=IEA]
[GO:0007411 "axon guidance" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0005604 "basement membrane" evidence=IEA]
[GO:0001764 "neuron migration" evidence=IEA] InterPro:IPR001134
PROSITE:PS50189 GO:GO:0005737 GO:GO:0007411 GO:GO:0001764
GO:GO:0008284 InterPro:IPR013032 PROSITE:PS00022 GO:GO:0030334
GO:GO:0016337 GO:GO:0045773 InterPro:IPR002049 InterPro:IPR008993
Pfam:PF00053 SMART:SM00180 SUPFAM:SSF50242 PROSITE:PS01248
PROSITE:PS50027 GO:GO:0005604 GO:GO:0040023 InterPro:IPR018933
Pfam:PF01759 GO:GO:0030517 SMART:SM00643 GO:GO:0060603
InterPro:IPR008211 Pfam:PF00055 SMART:SM00136 PROSITE:PS51117
GeneTree:ENSGT00690000102103 KO:K06843 CTD:9423 OMA:NCHTCDA
EMBL:DAAA02048825 EMBL:DAAA02048826 EMBL:DAAA02048827
EMBL:DAAA02048828 EMBL:DAAA02048829 EMBL:DAAA02048830
EMBL:DAAA02048831 IPI:IPI00704401 RefSeq:NP_001179495.1
UniGene:Bt.88333 Ensembl:ENSBTAT00000016103 GeneID:522767
KEGG:bta:522767 NextBio:20873588 Uniprot:F1N0C7
Length = 603
Score = 717 (257.5 bits), Expect = 7.7e-71, P = 7.7e-71
Identities = 155/314 (49%), Positives = 197/314 (62%)
Query: 26 DPCY-ENGRPRRCIPDFVNAAFGQEVKVNSVCGLESPERYCDTS--G-----ACHVCDAG 77
DPC ENG PRRCIPDFVNAAFG++V+V+S CG P RYC S G +CH+C+A
Sbjct: 38 DPCSDENGHPRRCIPDFVNAAFGKDVRVSSTCG-RPPARYCVVSERGEERLRSCHLCNAS 96
Query: 78 SPRGRFPAEYLTDLNNPSNVTCWRSEAQTSVNSLSASPDNVTLTLSLGKKFELTYISLSF 137
P+ P +LTDLNNP N+TCW+SE N L P NVTLTLSLGKKFE+TY+SL F
Sbjct: 97 DPKKAHPPAFLTDLNNPHNLTCWQSE-----NYLQF-PHNVTLTLSLGKKFEVTYVSLQF 150
Query: 138 CPKSIKPDSLAIYKSQDFGKSWQPLQFYSSQCKKLYGRTATGVISRGNEQEALCTDRHKK 197
C S +P+S+AIYKS D+G++W P QFYS+QC+K+Y R I++ NEQEA+CTD H
Sbjct: 151 C--SPRPESMAIYKSMDYGRTWVPFQFYSTQCRKMYNRPHRAPITKQNEQEAVCTDSHTD 208
Query: 198 Q----GGRCK---CNGHASR--CIKSP--QGEL------VCECRHNTAGKDCEKCKPFFS 240
GG +G S SP Q + V R +T G + E
Sbjct: 209 MRPLSGGLIAFSTLDGRPSAHDFDNSPVLQDWVTATDIRVAFSRLHTFGDENEDDSELAR 268
Query: 241 DRPWGRATVYDANECK-GGRCKCNGHASRCIKSPQGALVCECRHNTAGKDCEKCKPFFSD 299
D + Y ++ + GGRCKCNGHA+RC++ +LVC+CRHNTAG +C++CKPF D
Sbjct: 269 D-----SYFYAVSDLQVGGRCKCNGHAARCVRDRDDSLVCDCRHNTAGPECDRCKPFHYD 323
Query: 300 RPWGRATVYDANEC 313
RPW RAT +ANEC
Sbjct: 324 RPWQRATAREANEC 337
Score = 322 (118.4 bits), Expect = 2.8e-28, P = 2.8e-28
Identities = 58/111 (52%), Positives = 71/111 (63%)
Query: 199 GGRCKCNGHASRCIKSPQGELVCECRHNTAGKDCEKCKPFFSDRPWGRATVYDANECKGG 258
GGRCKCNGHA+RC++ LVC+CRHNTAG +C++CKPF DRPW RAT +ANEC
Sbjct: 281 GGRCKCNGHAARCVRDRDDSLVCDCRHNTAGPECDRCKPFHYDRPWQRATAREANECVA- 339
Query: 259 RCKCNGHASRC--------IKSPQGALVC-ECRHNTAGKDCEKCKP-FFSD 299
C CN HA RC + + VC CRHNTAG+ C CK ++ D
Sbjct: 340 -CNCNLHARRCRFNMELYKLSGRKSGGVCLNCRHNTAGRHCHYCKEGYYRD 389
Score = 126 (49.4 bits), Expect = 6.1e-05, P = 6.1e-05
Identities = 34/111 (30%), Positives = 44/111 (39%)
Query: 192 TDRHKKQGGRCKCNGHASRC--------IKSPQGELVC-ECRHNTAGKDCEKCKPFFSDR 242
T R + C CN HA RC + + VC CRHNTAG+ C CK + R
Sbjct: 330 TAREANECVACNCNLHARRCRFNMELYKLSGRKSGGVCLNCRHNTAGRHCHYCKEGYY-R 388
Query: 243 PWGRATVYDANECKGGRCKCNGHASRCIKSPQGALVCECRHNTAGKDCEKC 293
G+ + CK C G A + G C C+ G C +C
Sbjct: 389 DLGKPITH-RKACKACDCHPVGAAGKTCNQTTGQ--CPCKDGVTGITCNRC 436
>UNIPROTKB|F1SS89 [details] [associations]
symbol:NTN1 "Netrin-1" species:9823 "Sus scrofa"
[GO:0060603 "mammary gland duct morphogenesis" evidence=IEA]
[GO:0045773 "positive regulation of axon extension" evidence=IEA]
[GO:0042472 "inner ear morphogenesis" evidence=IEA] [GO:0040023
"establishment of nucleus localization" evidence=IEA] [GO:0030517
"negative regulation of axon extension" evidence=IEA] [GO:0030334
"regulation of cell migration" evidence=IEA] [GO:0016337 "cell-cell
adhesion" evidence=IEA] [GO:0008284 "positive regulation of cell
proliferation" evidence=IEA] [GO:0007411 "axon guidance"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005604
"basement membrane" evidence=IEA] [GO:0001764 "neuron migration"
evidence=IEA] GO:GO:0005737 GO:GO:0007411 GO:GO:0001764
GO:GO:0008284 InterPro:IPR013032 PROSITE:PS00022 GO:GO:0030334
GO:GO:0016337 GO:GO:0045773 InterPro:IPR002049 Pfam:PF00053
SMART:SM00180 GO:GO:0005604 GO:GO:0040023 GO:GO:0030517
GO:GO:0060603 InterPro:IPR008211 Pfam:PF00055 SMART:SM00136
PROSITE:PS51117 GeneTree:ENSGT00690000102103 EMBL:CU656027
Ensembl:ENSSSCT00000019582 OMA:PTRATIS Uniprot:F1SS89
Length = 356
Score = 717 (257.5 bits), Expect = 7.7e-71, P = 7.7e-71
Identities = 155/314 (49%), Positives = 197/314 (62%)
Query: 26 DPCY-ENGRPRRCIPDFVNAAFGQEVKVNSVCGLESPERYCDTS--G-----ACHVCDAG 77
DPC ENG PRRCIPDFVNAAFG++V+V+S CG P RYC S G +CH+C+A
Sbjct: 39 DPCSDENGHPRRCIPDFVNAAFGKDVRVSSTCG-RPPARYCVVSERGEERLRSCHLCNAS 97
Query: 78 SPRGRFPAEYLTDLNNPSNVTCWRSEAQTSVNSLSASPDNVTLTLSLGKKFELTYISLSF 137
P+ P +LTDLNNP N+TCW+SE N L P NVTLTLSLGKKFE+TY+SL F
Sbjct: 98 DPKKAHPPAFLTDLNNPHNLTCWQSE-----NYLQF-PHNVTLTLSLGKKFEVTYVSLQF 151
Query: 138 CPKSIKPDSLAIYKSQDFGKSWQPLQFYSSQCKKLYGRTATGVISRGNEQEALCTDRHKK 197
C S +P+S+AIYKS D+G++W P QFYS+QC+K+Y R I++ NEQEA+CTD H
Sbjct: 152 C--SPRPESMAIYKSMDYGRTWVPFQFYSTQCRKMYNRPHRAPITKQNEQEAVCTDSHTD 209
Query: 198 Q----GGRCK---CNGHASR--CIKSP--QGEL------VCECRHNTAGKDCEKCKPFFS 240
GG +G S SP Q + V R +T G + E
Sbjct: 210 MRPLSGGLIAFSTLDGRPSAHDFDNSPVLQDWVTATDIRVAFSRLHTFGDENEDDSELAR 269
Query: 241 DRPWGRATVYDANECK-GGRCKCNGHASRCIKSPQGALVCECRHNTAGKDCEKCKPFFSD 299
D + Y ++ + GGRCKCNGHA+RC++ +LVC+CRHNTAG +C++CKPF D
Sbjct: 270 D-----SYFYAVSDLQVGGRCKCNGHAARCVRDRDDSLVCDCRHNTAGPECDRCKPFHYD 324
Query: 300 RPWGRATVYDANEC 313
RPW RAT +ANEC
Sbjct: 325 RPWQRATAREANEC 338
Score = 250 (93.1 bits), Expect = 2.4e-21, P = 2.4e-21
Identities = 39/59 (66%), Positives = 47/59 (79%)
Query: 199 GGRCKCNGHASRCIKSPQGELVCECRHNTAGKDCEKCKPFFSDRPWGRATVYDANECKG 257
GGRCKCNGHA+RC++ LVC+CRHNTAG +C++CKPF DRPW RAT +ANEC G
Sbjct: 282 GGRCKCNGHAARCVRDRDDSLVCDCRHNTAGPECDRCKPFHYDRPWQRATAREANECVG 340
>UNIPROTKB|Q90923 [details] [associations]
symbol:NTN3 "Netrin-3" species:9031 "Gallus gallus"
[GO:0005102 "receptor binding" evidence=IEA] [GO:0005794 "Golgi
apparatus" evidence=IEA] [GO:0005578 "proteinaceous extracellular
matrix" evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IDA] [GO:0007520 "myoblast fusion"
evidence=IDA] InterPro:IPR001134 PROSITE:PS50189 GO:GO:0005794
GO:GO:0006355 GO:GO:0005578 PROSITE:PS00022 GO:GO:0007520
InterPro:IPR002049 InterPro:IPR008993 Pfam:PF00053 SMART:SM00180
SUPFAM:SSF50242 PROSITE:PS01248 PROSITE:PS50027 InterPro:IPR018933
Pfam:PF01759 SMART:SM00643 InterPro:IPR008211 Pfam:PF00055
SMART:SM00136 PROSITE:PS51117 HOVERGEN:HBG006464 eggNOG:NOG244580
HOGENOM:HOG000286017 EMBL:L34550 IPI:IPI00581364 PIR:B54665
UniGene:Gga.792 ProteinModelPortal:Q90923 STRING:Q90923
InParanoid:Q90923 OrthoDB:EOG4VHK67 Uniprot:Q90923
Length = 581
Score = 372 (136.0 bits), Expect = 4.5e-66, Sum P(2) = 4.5e-66
Identities = 75/143 (52%), Positives = 94/143 (65%)
Query: 52 VNSVCGLE-SPERYCDTSGACHVCDAGSPRGRFPAEYLTDLNNPSNVTCWRSEAQTSVNS 110
VN+ G E C H CDA PR P YLTDLN +N+TCWRSE +
Sbjct: 44 VNAAFGKEVQASSTCGKPPTRH-CDASDPRRAHPPAYLTDLNTAANMTCWRSE------T 96
Query: 111 LSASPDNVTLTLSLGKKFELTYISLSFCPKSIKPDSLAIYKSQDFGKSWQPLQFYSSQCK 170
L P NVTLTLSLGKKFE+ Y+SL FC S +P+S AI+KS D+GK+W P Q+YSSQC+
Sbjct: 97 LHHLPHNVTLTLSLGKKFEVVYVSLQFC--SPRPESTAIFKSMDYGKTWVPYQYYSSQCR 154
Query: 171 KLYGRTATGVISRGNEQEALCTD 193
K+YG+ + +++ NEQEALCTD
Sbjct: 155 KIYGKPSKATVTKQNEQEALCTD 177
Score = 325 (119.5 bits), Expect = 4.5e-66, Sum P(2) = 4.5e-66
Identities = 61/126 (48%), Positives = 77/126 (61%)
Query: 199 GGRCKCNGHASRCIKSPQGELVCECRHNTAGKDCEKCKPFFSDRPWGRATVYDANECKGG 258
GGRCKCNGHASRC+K + +LVC+C+HNT G +C++CKPF DRPW RA+ +ANEC
Sbjct: 259 GGRCKCNGHASRCVKDKEQKLVCDCKHNTEGPECDRCKPFHYDRPWQRASAREANECLA- 317
Query: 259 RCKCNGHASRC--------IKSPQGALVC-ECRHNTAGKDCEKCKP-FFSDRPWGRATVY 308
C CN HA RC + + VC CRHNTAG+ C CK F+ D ++
Sbjct: 318 -CNCNLHARRCRFNMELYKLSGRKSGGVCLNCRHNTAGRHCHYCKEGFYRDLS---KSIT 373
Query: 309 DANECK 314
D CK
Sbjct: 374 DRKACK 379
Score = 310 (114.2 bits), Expect = 5.1e-59, Sum P(2) = 5.1e-59
Identities = 65/114 (57%), Positives = 77/114 (67%)
Query: 26 DPCY-ENGRPRRCIPDFVNAAFGQEVKVNSVCGLESPERYCDTSGACHVCDAGSPRGRFP 84
DPCY E+G PRRCIP+FVNAAFG+EV+ +S CG + P R+CD S PR P
Sbjct: 27 DPCYDESGAPRRCIPEFVNAAFGKEVQASSTCG-KPPTRHCDAS---------DPRRAHP 76
Query: 85 AEYLTDLNNPSNVTCWRSEAQTSVNSLSASPDNVTLTLSLGKKFELTYISLSFC 138
YLTDLN +N+TCWRSE +L P NVTLTLSLGKKFE+ Y+SL FC
Sbjct: 77 PAYLTDLNTAANMTCWRSE------TLHHLPHNVTLTLSLGKKFEVVYVSLQFC 124
Score = 133 (51.9 bits), Expect = 7.2e-46, Sum P(2) = 7.2e-46
Identities = 36/110 (32%), Positives = 45/110 (40%)
Query: 202 CKCNGHASRC--------IKSPQGELVC-ECRHNTAGKDCEKCKP-FFSDRPWGRATVYD 251
C CN HA RC + + VC CRHNTAG+ C CK F+ D ++ D
Sbjct: 318 CNCNLHARRCRFNMELYKLSGRKSGGVCLNCRHNTAGRHCHYCKEGFYRDLS---KSITD 374
Query: 252 ANECKGGRCKCNGHASRCIKSPQGALVCECRHNTAGKDCEKC-KPFFSDR 300
CK C G A + G C C+ G C +C K F R
Sbjct: 375 RKACKACDCHPVGAAGKTCNQTTGQ--CPCKDGVTGLTCNRCAKGFQQSR 422
Score = 62 (26.9 bits), Expect = 2.9e-31, Sum P(2) = 2.9e-31
Identities = 39/159 (24%), Positives = 57/159 (35%)
Query: 153 QDFGKSWQPLQFYSSQCKKLYGRT-ATGVISR---GNEQEALCTDRHKKQGGRC-KCNG- 206
+D G P +YS ++ GR G SR EQ+ +C +H +G C +C
Sbjct: 240 EDGGAGATPY-YYSVGELQVGGRCKCNGHASRCVKDKEQKLVCDCKHNTEGPECDRCKPF 298
Query: 207 HASRCIKSPQGE-----LVCECRHNTAGKDCEKCKPFF--SDRPWGRATVYDANECKGGR 259
H R + L C C N + C + S R G + + G
Sbjct: 299 HYDRPWQRASAREANECLACNC--NLHARRCRFNMELYKLSGRKSGGVCLNCRHNTAGRH 356
Query: 260 CK-CN-GH---ASRCIKSPQGALVCECRH-NTAGKDCEK 292
C C G S+ I + C+C AGK C +
Sbjct: 357 CHYCKEGFYRDLSKSITDRKACKACDCHPVGAAGKTCNQ 395
Score = 40 (19.1 bits), Expect = 1.2e-30, Sum P(2) = 1.2e-30
Identities = 10/32 (31%), Positives = 17/32 (53%)
Query: 8 CVPLLIGAVCGEKIDLNSDPCYENGRP--RRC 37
C+P + A G+++ +S C G+P R C
Sbjct: 39 CIPEFVNAAFGKEVQASST-C---GKPPTRHC 66
>MGI|MGI:99914 [details] [associations]
symbol:Lamc1 "laminin, gamma 1" species:10090 "Mus musculus"
[GO:0005201 "extracellular matrix structural constituent"
evidence=ISO] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005576 "extracellular region" evidence=IEA] [GO:0005578
"proteinaceous extracellular matrix" evidence=ISO] [GO:0005604
"basement membrane" evidence=ISO;IDA] [GO:0005605 "basal lamina"
evidence=IDA] [GO:0005606 "laminin-1 complex" evidence=ISO]
[GO:0006461 "protein complex assembly" evidence=ISO] [GO:0007155
"cell adhesion" evidence=ISO] [GO:0016477 "cell migration"
evidence=ISO] [GO:0022617 "extracellular matrix disassembly"
evidence=ISO] [GO:0031012 "extracellular matrix" evidence=ISO]
[GO:0031175 "neuron projection development" evidence=IDA]
[GO:0031581 "hemidesmosome assembly" evidence=ISO] [GO:0034446
"substrate adhesion-dependent cell spreading" evidence=ISO]
[GO:0043208 "glycosphingolipid binding" evidence=IDA] [GO:0043259
"laminin-10 complex" evidence=IPI] [GO:0070062 "extracellular
vesicular exosome" evidence=ISO] MGI:MGI:99914 GO:GO:0016477
GO:GO:0006461 GO:GO:0007155 InterPro:IPR013032 PROSITE:PS00022
Reactome:REACT_127416 PROSITE:PS01186 InterPro:IPR002049
Pfam:PF00053 SMART:SM00180 PROSITE:PS01248 PROSITE:PS50027
GO:GO:0031175 GO:GO:0031581 GO:GO:0022617 GO:GO:0005201
GO:GO:0043208 InterPro:IPR018031 InterPro:IPR000034
InterPro:IPR008211 Pfam:PF00052 Pfam:PF00055 SMART:SM00281
SMART:SM00136 PROSITE:PS51115 PROSITE:PS51117 eggNOG:NOG235720
HOGENOM:HOG000019301 GO:GO:0043259 HOVERGEN:HBG100808
OrthoDB:EOG49GKFS EMBL:X05211 EMBL:J03484 EMBL:J02930 EMBL:J03749
IPI:IPI00400016 PIR:A28469 PIR:S55783 UniGene:Mm.1249 PDB:1KLO
PDB:1NPE PDB:1TLE PDB:4AQT PDBsum:1KLO PDBsum:1NPE PDBsum:1TLE
PDBsum:4AQT ProteinModelPortal:P02468 SMR:P02468 MINT:MINT-1031545
STRING:P02468 PhosphoSite:P02468 PaxDb:P02468 PRIDE:P02468
UCSC:uc007czu.1 InParanoid:P02468 EvolutionaryTrace:P02468
CleanEx:MM_LAMC1 Genevestigator:P02468
GermOnline:ENSMUSG00000026478 Uniprot:P02468
Length = 1607
Score = 355 (130.0 bits), Expect = 1.7e-58, Sum P(2) = 1.7e-58
Identities = 81/194 (41%), Positives = 112/194 (57%)
Query: 10 PLL--IGAVCGEKIDLNSDPCY-ENGRPRRCIPDFVNAAFGQEVKVNSVCGLESPERYCD 66
PLL + AV G + D C E GRP+RC+P+FVNAAF V + CG PE YC
Sbjct: 19 PLLAVLAAVAG-CVRAAMDECADEGGRPQRCMPEFVNAAFNVTVVATNTCGTP-PEEYCV 76
Query: 67 TSG------ACHVCDAGSPRGRFPAEYLTDLNNPSNVTCWRSEAQTSVNSLSASPDNVTL 120
+G +CH+CDAG + A +LTD NN ++ T W+S QT + + P+++ L
Sbjct: 77 QTGVTGVTKSCHLCDAGQQHLQHGAAFLTDYNNQADTTWWQS--QTMLAGVQY-PNSINL 133
Query: 121 TLSLGKKFELTYISLSFCPKSIKPDSLAIYKSQDFGKSWQPLQFYSSQCKKLYGRTATGV 180
TL LGK F++TY+ L F + +P+S AIYK W P Q+YS C+ Y + G
Sbjct: 134 TLHLGKAFDITYVRLKF--HTSRPESFAIYKRTREDGPWIPYQYYSGSCENTYSKANRGF 191
Query: 181 I-SRGNEQEALCTD 193
I + G+EQ+ALCTD
Sbjct: 192 IRTGGDEQQALCTD 205
Score = 292 (107.8 bits), Expect = 1.7e-58, Sum P(2) = 1.7e-58
Identities = 53/106 (50%), Positives = 64/106 (60%)
Query: 199 GGRCKCNGHASRCIKSPQGELVCECRHNTAGKDCEKCKPFFSDRPWGRATVYDANECKGG 258
GGRCKCNGHAS C+K+ +L+C C+HNT G DCEKC PFF+DRPW RAT A+E
Sbjct: 281 GGRCKCNGHASECVKNEFDKLMCNCKHNTYGVDCEKCLPFFNDRPWRRATAESASESLP- 339
Query: 259 RCKCNGHASRCIKSPQ-------GALVCECRHNTAGKDCEKCKPFF 297
C CNG + C P+ G CR NT G CE+C+ F
Sbjct: 340 -CDCNGRSQECYFDPELYRSTGHGGHCTNCRDNTDGAKCERCRENF 384
Score = 227 (85.0 bits), Expect = 1.2e-51, Sum P(2) = 1.2e-51
Identities = 37/56 (66%), Positives = 43/56 (76%)
Query: 257 GGRCKCNGHASRCIKSPQGALVCECRHNTAGKDCEKCKPFFSDRPWGRATVYDANE 312
GGRCKCNGHAS C+K+ L+C C+HNT G DCEKC PFF+DRPW RAT A+E
Sbjct: 281 GGRCKCNGHASECVKNEFDKLMCNCKHNTYGVDCEKCLPFFNDRPWRRATAESASE 336
Score = 178 (67.7 bits), Expect = 1.7e-46, Sum P(2) = 1.7e-46
Identities = 43/104 (41%), Positives = 56/104 (53%)
Query: 202 CKCNGHASRCIKSPQGELVCECRHNTAGKDCEKCKPFFSDRPWGRATVYDANECKGGRCK 261
C CNGH+ C P+ VC+CR NTAG CEKC SD +G +T+ +++C+ C
Sbjct: 722 CTCNGHSETC--DPETG-VCDCRDNTAGPHCEKC----SDGYYGDSTLGTSSDCQP--CP 772
Query: 262 CNGHASRCIKSPQGALVC-ECRHNTAGKDCEKCKP-FFSDRPWG 303
C G +S I +VC C TAGK CE C +F D P G
Sbjct: 773 CPGGSSCAIVPKTKEVVCTHCPTGTAGKRCELCDDGYFGD-PLG 815
Score = 136 (52.9 bits), Expect = 4.4e-42, Sum P(2) = 4.4e-42
Identities = 34/94 (36%), Positives = 47/94 (50%)
Query: 221 CECRHNTAGKDCEKCKPFFSDRPWGRATVYDANECKGGRCKCNGHASRCIKSPQGALVCE 280
C C G+ CE C P + R Y + C C CNGH+ C P+ VC+
Sbjct: 688 CTCPVGYGGQFCETCLPGYR-RETPSLGPY--SPCV--LCTCNGHSETC--DPETG-VCD 739
Query: 281 CRHNTAGKDCEKCKPFFSDRPWGRATVYDANECK 314
CR NTAG CEKC SD +G +T+ +++C+
Sbjct: 740 CRDNTAGPHCEKC----SDGYYGDSTLGTSSDCQ 769
Score = 117 (46.2 bits), Expect = 4.4e-40, Sum P(2) = 4.4e-40
Identities = 39/118 (33%), Positives = 50/118 (42%)
Query: 202 CKCNGHASRCIKSPQGELVC-ECRHNTAGKDCEKCKP-FFSDRPWGRATVYDANECKGGR 259
C C G +S I E+VC C TAGK CE C +F D P G C+
Sbjct: 771 CPCPGGSSCAIVPKTKEVVCTHCPTGTAGKRCELCDDGYFGD-PLGSNG--PVRLCRP-- 825
Query: 260 CKCNGHASRCIKSPQGALVCECR---HNTAGKDCEKCKPFFSDRPWGRATVYDANECK 314
C+CN + L EC +NTAG C++CK F P A++CK
Sbjct: 826 CQCNDNIDPNAVGNCNRLTGECLKCIYNTAGFYCDRCKEGFFGNP---LAPNPADKCK 880
Score = 111 (44.1 bits), Expect = 1.9e-39, Sum P(2) = 1.9e-39
Identities = 30/101 (29%), Positives = 48/101 (47%)
Query: 202 CKCNGH-----ASRCIKSPQGELVCECRHNTAGKDCEKCKPFFSDRPWGRATVYDANECK 256
C+CN + C + GE + +C +NTAG C++CK F P A++CK
Sbjct: 826 CQCNDNIDPNAVGNCNRLT-GECL-KCIYNTAGFYCDRCKEGFFGNP---LAPNPADKCK 880
Query: 257 GGRCKCNGHASRCIKSPQGALV--CECRHNTAGKDCEKCKP 295
C CN + + +S + C+C + +G+DC C P
Sbjct: 881 A--CACNPYGTVQQQSSCNPVTGQCQCLPHVSGRDCGTCDP 919
Score = 109 (43.4 bits), Expect = 3.0e-39, Sum P(2) = 3.0e-39
Identities = 42/148 (28%), Positives = 59/148 (39%)
Query: 166 SSQC---KKLYGRTATG---VISRGNEQEALCTDRHKKQGGRCKCNGHASRCIKSPQGEL 219
S +C +LY T G R N A C +R ++ R S C SP G L
Sbjct: 346 SQECYFDPELYRSTGHGGHCTNCRDNTDGAKC-ERCRENFFRLGNTEACSPCHCSPVGSL 404
Query: 220 V--------CECRHNTAGKDCEKCKPFFSDRPWGRATVYDANECKGGRCKCNGHASRCIK 271
C C+ G C++C+P F ++ +A C+ C G C
Sbjct: 405 STQCDSYGRCSCKPGVMGDKCDRCQPGFH-------SLTEAG-CRPCSCDLRGSTDEC-N 455
Query: 272 SPQGALVCECRHNTAGKDCEKCKP-FFS 298
G C C+ N G +CE+CKP FF+
Sbjct: 456 VETGR--CVCKDNVEGFNCERCKPGFFN 481
Score = 107 (42.7 bits), Expect = 4.9e-39, Sum P(2) = 4.9e-39
Identities = 32/108 (29%), Positives = 48/108 (44%)
Query: 201 RCKCNGHAS---RC-IKSPQGELVCECRHNTAGKDCEKCKP-FFSDRPWGRATVYDANEC 255
RC C+ S +C I++ Q CEC+ G+ CE+C+ F P G C
Sbjct: 932 RCDCHALGSTNGQCDIRTGQ----CECQPGITGQHCERCETNHFGFGPEG---------C 978
Query: 256 KGGRCKCNGHASRCIKSPQGALVCECRHNTAGKDCEKCKP-FFSDRPW 302
K C C+ S ++ CECR G C++C+ +F +R W
Sbjct: 979 KP--CDCHHEGSLSLQCKDDGR-CECREGFVGNRCDQCEENYFYNRSW 1023
Score = 96 (38.9 bits), Expect = 7.0e-38, Sum P(2) = 7.0e-38
Identities = 27/99 (27%), Positives = 47/99 (47%)
Query: 202 CKCNGHASRCIKSPQGELV--CECRHNTAGKDCEKCKPFFSDRPWGRATVYDANECKGGR 259
C CN + + +S + C+C + +G+DC C P + + G+ C+ R
Sbjct: 882 CACNPYGTVQQQSSCNPVTGQCQCLPHVSGRDCGTCDPGYYNLQSGQG-------CE--R 932
Query: 260 CKCNGHAS---RC-IKSPQGALVCECRHNTAGKDCEKCK 294
C C+ S +C I++ Q CEC+ G+ CE+C+
Sbjct: 933 CDCHALGSTNGQCDIRTGQ----CECQPGITGQHCERCE 967
Score = 40 (19.1 bits), Expect = 5.3e-32, Sum P(2) = 5.3e-32
Identities = 11/41 (26%), Positives = 19/41 (46%)
Query: 197 KQGGRCKCN-GHA-SRCIKSPQGELVCECRHNTAGKDCEKC 235
K GRC+C G +RC + + +N + C++C
Sbjct: 994 KDDGRCECREGFVGNRCDQCEENYF-----YNRSWPGCQEC 1029
>UNIPROTKB|F1N0T1 [details] [associations]
symbol:Bt.54919 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0060041 "retina development in camera-type eye"
evidence=IEA] [GO:0014002 "astrocyte development" evidence=IEA]
[GO:0007601 "visual perception" evidence=IEA] [GO:0005604 "basement
membrane" evidence=IEA] [GO:0000904 "cell morphogenesis involved in
differentiation" evidence=IEA] GO:GO:0007601 GO:GO:0060041
InterPro:IPR002049 Pfam:PF00053 SMART:SM00180 PROSITE:PS01248
PROSITE:PS50027 GO:GO:0005604 GO:GO:0014002 GO:GO:0000904
InterPro:IPR000034 InterPro:IPR008211 Pfam:PF00052 Pfam:PF00055
SMART:SM00136 PROSITE:PS51115 PROSITE:PS51117
GeneTree:ENSGT00690000102103 OMA:QRGRRCE EMBL:DAAA02032247
EMBL:DAAA02032248 EMBL:DAAA02032249 EMBL:DAAA02032250
EMBL:DAAA02032251 EMBL:DAAA02032252 EMBL:DAAA02032253
EMBL:DAAA02032254 IPI:IPI00698418 Ensembl:ENSBTAT00000023245
Uniprot:F1N0T1
Length = 1585
Score = 317 (116.6 bits), Expect = 4.3e-55, Sum P(2) = 4.3e-55
Identities = 75/196 (38%), Positives = 104/196 (53%)
Query: 6 LLCVPLLIGAVCGEKIDLNSDPCYEN-GRPRRCIPDFVNAAFGQEVKVNSVCGLESPERY 64
LL + LL G ++ CY+ GRP+RC+P F NAAFG+ + + CG PE +
Sbjct: 20 LLSLALLAPRAAGARMGA----CYDGAGRPQRCLPVFENAAFGRLAEASHTCG-RPPEDF 74
Query: 65 CDTSGA------CHVCDAGSPRGRFPAEYLTDLNNPSNVTCWRSEAQTSVNSLSASPDNV 118
C GA C CDA P A YLTD ++ + T W+S + P +V
Sbjct: 75 CPHVGAQGAGAPCQRCDAADPARHHNASYLTDFHSQDDSTWWQSPSMAFGVQY---PTSV 131
Query: 119 TLTLSLGKKFELTYISLSFCPKSIKPDSLAIYKSQDFGKSWQPLQFYSSQCKKLYGRTAT 178
+TL+LGK +E+TY+ L F + +P+S AIYK G W+P Q+YS+ C+K YGR
Sbjct: 132 NITLNLGKAYEITYVRLKF--HTSRPESFAIYKRSRAGGPWEPYQYYSASCQKTYGRPE- 188
Query: 179 GVISRGNEQE--ALCT 192
G+ R E E A CT
Sbjct: 189 GLFLRPGEDERVAFCT 204
Score = 298 (110.0 bits), Expect = 4.3e-55, Sum P(2) = 4.3e-55
Identities = 56/122 (45%), Positives = 65/122 (53%)
Query: 199 GGRCKCNGHASRCIKSPQGELVCECRHNTAGKDCEKCKPFFSDRPWGRATVYDANECKGG 258
GGRCKCNGHAS C +G L C C+HNT G DCE+C PFF DRPW R T ANEC
Sbjct: 281 GGRCKCNGHASECGPDEEGRLACRCQHNTTGTDCERCLPFFQDRPWARGTAEAANECLP- 339
Query: 259 RCKCNGHASRCI-------KSPQGALVCECRHNTAGKDCEKCKPFFSDRPWGRATVYDAN 311
C C+GH+ C S G CR +TAG CE+C+ F W T
Sbjct: 340 -CNCSGHSEECTFDRELFRSSGHGGRCLHCRAHTAGPHCERCQENFYR--WSPQTPCQPC 396
Query: 312 EC 313
+C
Sbjct: 397 DC 398
Score = 117 (46.2 bits), Expect = 4.5e-36, Sum P(2) = 4.5e-36
Identities = 36/104 (34%), Positives = 45/104 (43%)
Query: 214 SPQGELV--CECRHNTAGKDCEKCKPFFS-DRPWGRATVYDANECKGGRCKCNGHASRCI 270
SP V C C G+ CE C P + + P G Y + C C CN H + C
Sbjct: 678 SPPASWVETCSCPQGYTGQFCESCAPGYKRNTPLGGP--YAS--CVP--CTCNQHGT-C- 729
Query: 271 KSPQGALVCECRHNTAGKDCEKCKPFFSDRPW-GRATVYDANEC 313
P VC C H+T G CE+C P F P+ G+A D C
Sbjct: 730 -DPNTG-VCLCGHHTEGPSCERCLPGFYGNPFTGQAD--DCQPC 769
Score = 86 (35.3 bits), Expect = 8.0e-33, Sum P(2) = 8.0e-33
Identities = 23/79 (29%), Positives = 33/79 (41%)
Query: 198 QGG-R-CKCNGHASRCIKSPQGELVCECRHNTAGKDCEKCKPFFSDRPWGRATVYDANEC 255
+GG R C CN S P+ C C+ N G C++C+P G + N
Sbjct: 437 EGGCRPCTCNPVGSLGTCDPRSGR-CHCKENVEGSLCDRCRP-------GAFNLQPHNPA 488
Query: 256 KGGRCKCNGHASRCIKSPQ 274
C C GH+ C+ + Q
Sbjct: 489 GCSSCFCYGHSKVCVAAAQ 507
Score = 86 (35.3 bits), Expect = 8.0e-33, Sum P(2) = 8.0e-33
Identities = 24/96 (25%), Positives = 39/96 (40%)
Query: 202 CK-CNGHASRCIKSPQGEL-VCECRHNTAGKDCEKCKPFFSDRPWGRATVYDANECKGGR 259
C+ C+ H + ++ +L C C+ G C++C F G C+
Sbjct: 393 CQPCDCHPAGSLRLQCDDLGTCVCKPTVMGWKCDRCLSGFHSLSEGG--------CRP-- 442
Query: 260 CKCNGHASRCIKSPQGALVCECRHNTAGKDCEKCKP 295
C CN S P+ C C+ N G C++C+P
Sbjct: 443 CTCNPVGSLGTCDPRSGR-CHCKENVEGSLCDRCRP 477
Score = 54 (24.1 bits), Expect = 1.8e-29, Sum P(2) = 1.8e-29
Identities = 14/55 (25%), Positives = 21/55 (38%)
Query: 201 RCKCNGHASRCIKSPQGELVCECRHNTAGKDCEKCKPFFSDRPWGRATVYDANEC 255
RC C+G R + +L + G DCE C F W ++ + C
Sbjct: 883 RCSCDGSGGRQARHQDQDLTAV----SPGSDCEVCSKAF----WTSESMRELGTC 929
Score = 51 (23.0 bits), Expect = 2.5e-31, Sum P(3) = 2.5e-31
Identities = 23/102 (22%), Positives = 34/102 (33%)
Query: 214 SPQGEL--VCECRHNTAGKDCEKCKPFFSDRPWGRATVYDANECKGGRCKCNGHASRCIK 271
SP+G + C NT C C+ + + C RC C+G R +
Sbjct: 840 SPRGHVPGALRCSLNTLYSCCCCCRE--GQKLGVGVRGRPGSHCS--RCSCDGSGGRQAR 895
Query: 272 SPQGALVCECRHNTAGKDCEKCKPFFSDRPWGRATVYDANEC 313
L + G DCE C F W ++ + C
Sbjct: 896 HQDQDLTAV----SPGSDCEVCSKAF----WTSESMRELGTC 929
Score = 45 (20.9 bits), Expect = 2.5e-31, Sum P(3) = 2.5e-31
Identities = 10/21 (47%), Positives = 12/21 (57%)
Query: 202 CKCNGHASRCIKSPQ-GELVC 221
C C G S C P+ GE+VC
Sbjct: 769 CPCPGQ-SACTTIPESGEVVC 788
Score = 41 (19.5 bits), Expect = 4.1e-28, Sum P(2) = 4.1e-28
Identities = 12/46 (26%), Positives = 17/46 (36%)
Query: 191 CTDRHKKQGG-RCKCNGHASRCIKSPQGELVCECRHNTAGKDCEKC 235
C+ R G RC N S C +G+ + G C +C
Sbjct: 839 CSPRGHVPGALRCSLNTLYSCCCCCREGQKLGVGVRGRPGSHCSRC 884
>MGI|MGI:1344394 [details] [associations]
symbol:Lamc3 "laminin gamma 3" species:10090 "Mus musculus"
[GO:0000904 "cell morphogenesis involved in differentiation"
evidence=IGI] [GO:0005576 "extracellular region" evidence=IEA]
[GO:0005578 "proteinaceous extracellular matrix" evidence=IEA]
[GO:0005604 "basement membrane" evidence=IDA] [GO:0007155 "cell
adhesion" evidence=IEA] [GO:0007601 "visual perception"
evidence=IGI] [GO:0014002 "astrocyte development" evidence=IGI]
[GO:0060041 "retina development in camera-type eye" evidence=IGI]
MGI:MGI:1344394 GO:GO:0007601 GO:GO:0007155 PROSITE:PS00022
GO:GO:0060041 PROSITE:PS01186 EMBL:CH466542 InterPro:IPR002049
Pfam:PF00053 SMART:SM00180 PROSITE:PS01248 PROSITE:PS50027
GO:GO:0005604 GO:GO:0014002 GO:GO:0000904 InterPro:IPR000034
InterPro:IPR008211 Pfam:PF00052 Pfam:PF00055 SMART:SM00136
PROSITE:PS51115 PROSITE:PS51117 eggNOG:NOG235720
GeneTree:ENSGT00690000102103 HOGENOM:HOG000019301
HOVERGEN:HBG100808 CTD:10319 KO:K06247 OrthoDB:EOG498TZW
EMBL:AF083372 EMBL:AL928893 EMBL:BX511243 EMBL:BC096366
EMBL:AF079520 IPI:IPI00756854 RefSeq:NP_035966.2 UniGene:Mm.302362
ProteinModelPortal:Q9R0B6 SMR:Q9R0B6 STRING:Q9R0B6 PaxDb:Q9R0B6
PRIDE:Q9R0B6 Ensembl:ENSMUST00000028187 GeneID:23928 KEGG:mmu:23928
OMA:QRGRRCE NextBio:303725 Bgee:Q9R0B6 CleanEx:MM_LAMC3
Genevestigator:Q9R0B6 GermOnline:ENSMUSG00000026840 Uniprot:Q9R0B6
Length = 1581
Score = 318 (117.0 bits), Expect = 6.9e-55, Sum P(2) = 6.9e-55
Identities = 71/179 (39%), Positives = 99/179 (55%)
Query: 22 DLNSDPCYEN-GRPRRCIPDFVNAAFGQEVKVNSVCGLESPERYCDTSGA------CHVC 74
D+ S CY+ GR +RC+P+F NAAFG+ + + CG PE +C GA C C
Sbjct: 30 DMGS--CYDGVGRAQRCLPEFENAAFGRRAEASHTCG-RPPEDFCPHVGAPGAGLQCQRC 86
Query: 75 DAGSPRGRFPAEYLTDLNNPSNVTCWRSEAQTSVNSLSASPDNVTLTLSLGKKFELTYIS 134
D P R A YLTD ++P + T W+S + P +V LTLSLGK +E+TY+
Sbjct: 87 DDADPGRRHDASYLTDFHSPDDSTWWQSPSMAFGVQY---PTSVNLTLSLGKAYEITYVR 143
Query: 135 LSFCPKSIKPDSLAIYKSQDFGKSWQPLQFYSSQCKKLYGRTATGVISRG-NEQEALCT 192
L F + +P+S AIYK W+P Q+YS+ C+K YGR + G +E+ A CT
Sbjct: 144 LKF--HTSRPESFAIYKRTYASGPWEPYQYYSASCQKTYGRPEGHYLRPGEDERVAFCT 200
Score = 295 (108.9 bits), Expect = 6.9e-55, Sum P(2) = 6.9e-55
Identities = 55/123 (44%), Positives = 67/123 (54%)
Query: 199 GGRCKCNGHASRCIKSPQGELVCECRHNTAGKDCEKCKPFFSDRPWGRATVYDANECKGG 258
GGRCKCNGHAS C + G+L C C+HNT G DCE+C PFF DRPW R T DANEC
Sbjct: 277 GGRCKCNGHASECEPNAAGQLACRCQHNTTGVDCERCLPFFQDRPWARGTAEDANECLP- 335
Query: 259 RCKCNGHASRCI-------KSPQGALVCECRHNTAGKDCEKC-KPFFSDRPWGRATVYDA 310
C C+GH+ C + G CR +T G CE+C K ++ W T
Sbjct: 336 -CNCSGHSEECTFDRELYRSTGHGGHCQRCRDHTTGPHCERCEKNYYR---WSPKTPCQP 391
Query: 311 NEC 313
+C
Sbjct: 392 CDC 394
Score = 145 (56.1 bits), Expect = 4.0e-39, Sum P(2) = 4.0e-39
Identities = 39/105 (37%), Positives = 51/105 (48%)
Query: 202 CKCNGHASRCIKSPQGELVCECRHNTAGKDCEKCKPFFSDRPWGRATVYDANECKGGRCK 261
C CN H + C P +C C H+T G CE+C P F +G A A++C+ C
Sbjct: 719 CTCNQHGT-C--DPNTG-ICLCGHHTEGPSCERCMPGF----YGNAFSGRADDCQP--CP 768
Query: 262 CNGHASRCIKSPQ-GALVC-ECRHNTAGKDCEKCKP-FFSDRPWG 303
C G S C P+ G +VC C G+ CE C+ FF D P G
Sbjct: 769 CPGQ-SACATIPESGDVVCTHCPPGQRGRRCESCEDGFFGD-PLG 811
Score = 118 (46.6 bits), Expect = 2.8e-36, Sum P(2) = 2.8e-36
Identities = 31/108 (28%), Positives = 45/108 (41%)
Query: 201 RCKCNGHAS-RCIKS--PQGELVCECRHNTAGKDCEKCKPFFSDRPWGRATVY-DANECK 256
RC+C+G+ + + P C +NT G CE C+ F +G A ++C
Sbjct: 821 RCQCSGNVDLNAVGNCDPHSGHCLRCLYNTTGAHCEHCREGF----YGSAVATRPVDKCA 876
Query: 257 GGRCKCNGHASRCIKSPQGALVCECRHNTAGKDCEKCKPFFSDRPWGR 304
C G S +P C C +G+DC +C P F D GR
Sbjct: 877 PCSCDLRGSVSEKTCNPVTGQ-CVCLPYVSGRDCSRCSPGFYDLQSGR 923
Score = 104 (41.7 bits), Expect = 8.1e-35, Sum P(2) = 8.1e-35
Identities = 40/140 (28%), Positives = 56/140 (40%)
Query: 165 YSSQCKK-LYGRTATGV--ISRGNEQEALCTDRHKKQGGRCKCN--GHASRCIKSP-QGE 218
+S C + LY T G A+ T R + C C+ G S +P G+
Sbjct: 839 HSGHCLRCLYNTTGAHCEHCREGFYGSAVAT-RPVDKCAPCSCDLRGSVSEKTCNPVTGQ 897
Query: 219 LVCECRHNTAGKDCEKCKPFFSDRPWGRATVYDANECKGGRCKCNGHASRCIKSPQGALV 278
C C +G+DC +C P F D GR C+ CKC+ S K
Sbjct: 898 --CVCLPYVSGRDCSRCSPGFYDLQSGRG-------CQS--CKCHPLGSLENKCHPKTGQ 946
Query: 279 CECRHNTAGKDCEKCK-PFF 297
C CR G+ C++C+ FF
Sbjct: 947 CPCRPGVTGQACDRCQLGFF 966
Score = 103 (41.3 bits), Expect = 1.0e-34, Sum P(2) = 1.0e-34
Identities = 29/104 (27%), Positives = 44/104 (42%)
Query: 202 CKCNGHASRCI------KSPQGELVCE-CRHNTAGKDCEKC-KPFFSDRPWGRATVYDAN 253
C C+GH+ C +S C+ CR +T G CE+C K ++ W T
Sbjct: 336 CNCSGHSEECTFDRELYRSTGHGGHCQRCRDHTTGPHCERCEKNYYR---WSPKT----- 387
Query: 254 ECKGGRCKCNGHASRCIKSPQGALVCECRHNTAGKDCEKCKPFF 297
C+ C C+ S ++ VC C+ G C++C P F
Sbjct: 388 PCQP--CDCHPAGSLSLQCDNSG-VCPCKPTVTGWKCDRCLPGF 428
Score = 100 (40.3 bits), Expect = 2.1e-34, Sum P(2) = 2.1e-34
Identities = 33/95 (34%), Positives = 42/95 (44%)
Query: 221 CECRHNTAGKDCEKCKPFFS-DRPWGRATVYDANECKGGRCKCNGHASRCIKSPQGALVC 279
C C G+ CE C + + P G Y AN C C CN H + C P +C
Sbjct: 685 CLCPQGYTGQFCEFCALGYKREIPHGGP--Y-AN-CIP--CTCNQHGT-C--DPNTG-IC 734
Query: 280 ECRHNTAGKDCEKCKP-FFSDRPWGRATVYDANEC 313
C H+T G CE+C P F+ + GRA D C
Sbjct: 735 LCGHHTEGPSCERCMPGFYGNAFSGRAD--DCQPC 767
Score = 97 (39.2 bits), Expect = 4.4e-34, Sum P(2) = 4.4e-34
Identities = 24/94 (25%), Positives = 36/94 (38%)
Query: 202 CKCNGHASRCIKSPQGELVCECRHNTAGKDCEKCKPFFSDRPWGRATVYDANECKGGRCK 261
C C+ S ++ VC C+ G C++C P F G C+ C
Sbjct: 392 CDCHPAGSLSLQCDNSG-VCPCKPTVTGWKCDRCLPGFHSLSEGG--------CRPCACN 442
Query: 262 CNGHASRCIKSPQGALVCECRHNTAGKDCEKCKP 295
G C P+ C C+ N G C++C+P
Sbjct: 443 VAGSLGTC--DPRSGN-CPCKENVEGSLCDRCRP 473
Score = 88 (36.0 bits), Expect = 3.9e-33, Sum P(2) = 3.9e-33
Identities = 30/105 (28%), Positives = 44/105 (41%)
Query: 198 QGGR----CKCNGHASRCIKSPQGELVCECRHNTAGKDCEKCKPFFSDRPWGRATVYDAN 253
Q GR CKC+ S K C CR G+ C++C+ F +G +
Sbjct: 920 QSGRGCQSCKCHPLGSLENKCHPKTGQCPCRPGVTGQACDRCQLGF----FG----FSIK 971
Query: 254 ECKGGRCKCNGHAS-RCIKSPQGALVCECRHNTAGKDCEKCKPFF 297
C+ RC G AS +C ++ C CR G C++C+ F
Sbjct: 972 GCRDCRCSPLGAASSQCHENS----TCVCRPGFVGYKCDRCQDNF 1012
Score = 76 (31.8 bits), Expect = 7.0e-32, Sum P(2) = 7.0e-32
Identities = 22/74 (29%), Positives = 30/74 (40%)
Query: 198 QGG-R-CKCNGHASRCIKSPQGELVCECRHNTAGKDCEKCKPFFSDRPWGRATVYDANEC 255
+GG R C CN S P+ C C+ N G C++C+P G + N
Sbjct: 433 EGGCRPCACNVAGSLGTCDPRSGN-CPCKENVEGSLCDRCRP-------GTFNLQPHNPV 484
Query: 256 KGGRCKCNGHASRC 269
C C GH+ C
Sbjct: 485 GCSSCFCYGHSKVC 498
>WB|WBGene00016913 [details] [associations]
symbol:lam-2 species:6239 "Caenorhabditis elegans"
[GO:0009792 "embryo development ending in birth or egg hatching"
evidence=IMP] [GO:0002119 "nematode larval development"
evidence=IMP] [GO:0008340 "determination of adult lifespan"
evidence=IMP] [GO:0040011 "locomotion" evidence=IMP] [GO:0000003
"reproduction" evidence=IMP] [GO:0010171 "body morphogenesis"
evidence=IMP] [GO:0040017 "positive regulation of locomotion"
evidence=IMP] GO:GO:0008340 GO:GO:0009792 GO:GO:0002119
GO:GO:0010171 GO:GO:0040011 GO:GO:0040017 GO:GO:0000003
PROSITE:PS00022 PROSITE:PS01186 InterPro:IPR002049 Pfam:PF00053
SMART:SM00180 PROSITE:PS01248 PROSITE:PS50027 EMBL:FO080795
InterPro:IPR018031 InterPro:IPR000034 InterPro:IPR008211
Pfam:PF00052 Pfam:PF00055 SMART:SM00281 SMART:SM00136
PROSITE:PS51115 PROSITE:PS51117 PIR:T28811 RefSeq:NP_509204.3
IntAct:Q18823 MINT:MINT-118164 STRING:Q18823 PaxDb:Q18823
EnsemblMetazoa:C54D1.5.1 EnsemblMetazoa:C54D1.5.2 GeneID:180980
KEGG:cel:CELE_C54D1.5 UCSC:C54D1.5 CTD:180980 WormBase:C54D1.5
eggNOG:NOG235720 GeneTree:ENSGT00690000102103 HOGENOM:HOG000019301
InParanoid:Q18823 OMA:DRCKENK NextBio:911826 Uniprot:Q18823
Length = 1633
Score = 387 (141.3 bits), Expect = 2.4e-34, P = 2.4e-34
Identities = 94/259 (36%), Positives = 123/259 (47%)
Query: 71 CHVCDAGSPRGRFPAEYLTDLNNPSNVTCWRSEAQTSVNSLSASPDNVTLTLSLGKKFEL 130
C CD PA+YLTD N +N T W+S+ P LTL LGK F++
Sbjct: 91 CETCDDRHEGFSHPAKYLTDFNVGNNETWWQSDTMQEGQQY---PTTTNLTLVLGKSFDI 147
Query: 131 TYISLSFCPKSIKPDSLAIYKSQDFGKSWQPLQFYSSQCKKLYGRTATGVISRGNEQEAL 190
TY+ L F S +P+S IYK W+P QFYS C+ YG + I GNE A
Sbjct: 148 TYVRLKFI--SPRPESFTIYKKTHTDSEWEPWQFYSGSCRATYGLSDRAPILPGNEATAQ 205
Query: 191 CT----DRHKKQGGRCKCNGHASR--CIKSPQGELVCECRHNTAGK-DCEKCKPF----F 239
CT D GG + R + E++ + +A + + F F
Sbjct: 206 CTKEFSDISPITGGNIAFSTLEGRPSAHAFEESEVLQKWVTASAIRISLNRMNTFGDEVF 265
Query: 240 SDRPWGRATVYDANE-CKGGRCKCNGHASRCIKSP----QGALVCECRHNTAGKDCEKCK 294
D R+ Y ++ GGRCKCNGHAS C+ S + LVC C HNT G DC +C
Sbjct: 266 KDPQVLRSYYYAISDFAVGGRCKCNGHASECVGSSSVDGENRLVCRCEHNTQGADCNECL 325
Query: 295 PFFSDRPWGRATVYDANEC 313
PF++DRPW T +ANEC
Sbjct: 326 PFYNDRPWRSGTSVEANEC 344
Score = 341 (125.1 bits), Expect = 2.7e-53, Sum P(2) = 2.7e-53
Identities = 71/177 (40%), Positives = 94/177 (53%)
Query: 24 NSDPCYENG--RPRRCIPDFVNAAFGQEVKVNSVCGLESPERYCDTSG------ACHVCD 75
+ +PCY+ +P+RC+PDFVNAAF EV+V + CG + P ++C SG C CD
Sbjct: 36 DGNPCYDRATRQPQRCVPDFVNAAFNLEVQVTNTCGTKRPTKFCVQSGHTGQRSVCETCD 95
Query: 76 AGSPRGRFPAEYLTDLNNPSNVTCWRSEAQTSVNSLSASPDNVTLTLSLGKKFELTYISL 135
PA+YLTD N +N T W+S+ P LTL LGK F++TY+ L
Sbjct: 96 DRHEGFSHPAKYLTDFNVGNNETWWQSDTMQEGQQY---PTTTNLTLVLGKSFDITYVRL 152
Query: 136 SFCPKSIKPDSLAIYKSQDFGKSWQPLQFYSSQCKKLYGRTATGVISRGNEQEALCT 192
F S +P+S IYK W+P QFYS C+ YG + I GNE A CT
Sbjct: 153 KFI--SPRPESFTIYKKTHTDSEWEPWQFYSGSCRATYGLSDRAPILPGNEATAQCT 207
Score = 257 (95.5 bits), Expect = 2.7e-53, Sum P(2) = 2.7e-53
Identities = 50/106 (47%), Positives = 61/106 (57%)
Query: 199 GGRCKCNGHASRCI--KSPQGE--LVCECRHNTAGKDCEKCKPFFSDRPWGRATVYDANE 254
GGRCKCNGHAS C+ S GE LVC C HNT G DC +C PF++DRPW T +ANE
Sbjct: 284 GGRCKCNGHASECVGSSSVDGENRLVCRCEHNTQGADCNECLPFYNDRPWRSGTSVEANE 343
Query: 255 CKGGRCKCNGHASRCIKSPQ-------GALVCECRHNTAGKDCEKC 293
C C C+ ++RC Q G +C+ NT G CE+C
Sbjct: 344 CIA--CNCSQLSNRCYFDQQLFEETGHGGHCIDCQGNTQGVHCEQC 387
Score = 144 (55.7 bits), Expect = 2.1e-41, Sum P(2) = 2.1e-41
Identities = 37/115 (32%), Positives = 57/115 (49%)
Query: 201 RCKCNGHASRCIKSPQGELVCECRHNTAGKDCEKC-KPFFSDRPWGRATVYDANECKGGR 259
+C C+ H++ C ++ G +CE HNTAG CE+C + ++ D G T D +C
Sbjct: 735 KCDCHNHSNSC-EAESGSCICE--HNTAGDTCERCARGYYGDALQG--TEEDCQKCP--- 786
Query: 260 CKCNGHASRCIKSPQGALVC-ECRHNTAGKDCEKCKPFFSDRPWGRATVYDANEC 313
C +G CI G ++C EC + G+ C++C SD +G D EC
Sbjct: 787 CPNDGP---CILHADGDVICTECPNGYTGRRCDEC----SDGYFGNPK--DGTEC 832
Score = 132 (51.5 bits), Expect = 3.7e-40, Sum P(2) = 3.7e-40
Identities = 42/151 (27%), Positives = 66/151 (43%)
Query: 166 SSQC---KKLYGRTATG---VISRGNEQEALCTD---RHKKQGGR-----CKCNGHASRC 211
S++C ++L+ T G + +GN Q C H ++ G C CN S
Sbjct: 353 SNRCYFDQQLFEETGHGGHCIDCQGNTQGVHCEQCIANHWRRPGENYCVACGCNEIGSLS 412
Query: 212 IKSPQGELVCECRHNTAGKDCEKCKPFFSDRPWGRATVYDANECKGGRCKCNGHAS---R 268
+ E C+C+ G+ C++C F D + N CK C+ +G + R
Sbjct: 413 TQC-DNEGKCQCKPGVTGRFCDQCLDGFYD--------FSTNGCKNCGCETSGSLNNQPR 463
Query: 269 CIKSPQGALVCECRHNTAGKDCEKCKPFFSD 299
C S G+ C C+ N G+ C+KCKP + D
Sbjct: 464 C-DSSSGS--CSCKLNVEGRQCDKCKPGYFD 491
Score = 131 (51.2 bits), Expect = 4.8e-40, Sum P(2) = 4.8e-40
Identities = 32/96 (33%), Positives = 48/96 (50%)
Query: 221 CECRHNTAGKDCEKCKPFFSDRPWGRATVYDA--NECKGGRCKCNGHASRCIKSPQGALV 278
CEC G+ CE C+ F R T + N C +C C+ H++ C ++ G+ +
Sbjct: 702 CECLPGFVGQFCESCESGFR-----RETKFGGPFNHCI--KCDCHNHSNSC-EAESGSCI 753
Query: 279 CECRHNTAGKDCEKC-KPFFSDRPWGRATVYDANEC 313
CE HNTAG CE+C + ++ D G T D +C
Sbjct: 754 CE--HNTAGDTCERCARGYYGDALQG--TEEDCQKC 785
Score = 125 (49.1 bits), Expect = 2.0e-39, Sum P(2) = 2.0e-39
Identities = 34/118 (28%), Positives = 51/118 (43%)
Query: 201 RCKCNGHASRCIKSPQGELVC-ECRHNTAGKDCEKCKPFFSDRPWGRATVYDANECKGGR 259
+C C CI G+++C EC + G+ C++C SD +G D EC
Sbjct: 784 KCPCPNDGP-CILHADGDVICTECPNGYTGRRCDEC----SDGYFGNPK--DGTECV--E 834
Query: 260 CKCNGHASRCIKSPQGALVCECRH---NTAGKDCEKCKPFFSDRPWGRATVYDANECK 314
C C+G+ + EC+ NT G +CE CKP + WG A + C+
Sbjct: 835 CACSGNTDPNSIGNCDKITGECKKCIFNTHGFNCENCKPGY----WGDALIEPKGNCQ 888
Score = 88 (36.0 bits), Expect = 1.5e-35, Sum P(2) = 1.5e-35
Identities = 25/96 (26%), Positives = 44/96 (45%)
Query: 202 CKCN--GHASRCIKSPQGELVCECRHNTAGKDCEKCKPFFSDRPWGRATVYDANECKGGR 259
C C+ G G+ C+C+ G+ C++C +D +G + AN C+
Sbjct: 946 CNCDPLGSEGNTCDVNTGQ--CQCKPGVTGQRCDRC----ADYHFG----FSANGCQPCD 995
Query: 260 CKCNGHASR-C-IKSPQGALVCECRHNTAGKDCEKC 293
C+ G ++ C + S Q C C+ N G+ C++C
Sbjct: 996 CEYIGSENQQCDVNSGQ----CLCKENVEGRRCDQC 1027
Score = 85 (35.0 bits), Expect = 3.2e-35, Sum P(2) = 3.2e-35
Identities = 23/71 (32%), Positives = 33/71 (46%)
Query: 202 CKCNGHAS---RCIKSPQGELVCECRHNTAGKDCEKCKPFFSDRPWGRATVYDANECKGG 258
C+ +G + RC S G C C+ N G+ C+KCKP + D + N+
Sbjct: 452 CETSGSLNNQPRC-DSSSGS--CSCKLNVEGRQCDKCKPGYFD-------LSTENQFGCT 501
Query: 259 RCKCNGHASRC 269
C C GH+S C
Sbjct: 502 PCFCFGHSSIC 512
>UNIPROTKB|G3N0E7 [details] [associations]
symbol:NTN3 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005794 "Golgi apparatus" evidence=IEA] [GO:0005576
"extracellular region" evidence=IEA] [GO:0005102 "receptor binding"
evidence=IEA] InterPro:IPR001134 PROSITE:PS50189 GO:GO:0005794
GO:GO:0005576 InterPro:IPR013032 PROSITE:PS00022 InterPro:IPR002049
InterPro:IPR008993 Pfam:PF00053 SMART:SM00180 SUPFAM:SSF50242
PROSITE:PS01248 PROSITE:PS50027 InterPro:IPR018933 Pfam:PF01759
SMART:SM00643 InterPro:IPR008211 Pfam:PF00055 SMART:SM00136
PROSITE:PS51117 CTD:4917 KO:K06844 OMA:TASPLCW
GeneTree:ENSGT00700000104042 EMBL:DAAA02057314
RefSeq:NP_001193834.1 UniGene:Bt.111865 Ensembl:ENSBTAT00000063051
GeneID:787961 KEGG:bta:787961 NextBio:20928798 Uniprot:G3N0E7
Length = 580
Score = 463 (168.0 bits), Expect = 3.3e-47, Sum P(2) = 3.3e-47
Identities = 117/277 (42%), Positives = 143/277 (51%)
Query: 52 VNSVCGLESPERYCDTSGACHVCDAGSPRGRFPAEYLTDLNNPSNVTCWRSEAQTSVNSL 111
VN+ G E A CDA PR PA LT ++ CWRS++ T V
Sbjct: 45 VNAALGREVLASSTCGRPATRACDASDPRRAHPAALLTSAGGTASPVCWRSDSLTQV--- 101
Query: 112 SASPDNVTLTLSLGKKFELTYISLSFCPKSIKPDSLAIYKSQDFGKSWQPLQFYSSQCKK 171
P NVTLT+ LGK FEL ++SL FC S P SLA+ KSQD G+SW PL F+SS C
Sbjct: 102 ---PHNVTLTVPLGKAFELVFVSLRFC--SAPPTSLALLKSQDHGRSWTPLGFFSSHCGL 156
Query: 172 LYGRT-ATGVISRGNEQEALCTDRHKKQ--GGRCKCNGHASRCIK--SPQG-ELVCE--C 223
YGR A G EALC + Q GG G + ++ SP G +L
Sbjct: 157 DYGRLPAPADGPAGPGPEALCFPAPQAQPDGG-----GLLAFSVQDGSPPGLDLDSSPVL 211
Query: 224 RHNTAGKDCEKC--KP-FFSDRPWGRATV---YDANECK-GGRCKCNGHASRCIKSPQGA 276
+ D + +P D AT Y A E + GGRCKCNGHASRC+ PQG
Sbjct: 212 QDWVTATDIQVVLTRPAVLGDTRGAMATAPYSYSATELQVGGRCKCNGHASRCLLDPQGH 271
Query: 277 LVCECRHNTAGKDCEKCKPFFSDRPWGRATVYDANEC 313
L C+CRH T G DC +CKPF+ DRPW RAT +A+ C
Sbjct: 272 LTCDCRHGTEGPDCSRCKPFYCDRPWQRATAREAHAC 308
Score = 342 (125.4 bits), Expect = 1.9e-52, Sum P(2) = 1.9e-52
Identities = 64/125 (51%), Positives = 76/125 (60%)
Query: 199 GGRCKCNGHASRCIKSPQGELVCECRHNTAGKDCEKCKPFFSDRPWGRATVYDANECKGG 258
GGRCKCNGHASRC+ PQG L C+CRH T G DC +CKPF+ DRPW RAT +A+ C
Sbjct: 252 GGRCKCNGHASRCLLDPQGHLTCDCRHGTEGPDCSRCKPFYCDRPWQRATAREAHACLA- 310
Query: 259 RCKCNGHASRC--------IKSPQGALVC-ECRHNTAGKDCEKCKPFFSDRPWGRATVYD 309
C CNGHA RC + + VC CRHNTAG+ C C+ F P GRA + D
Sbjct: 311 -CSCNGHARRCRFNMELYRLSGRRSGGVCLNCRHNTAGRHCHYCREGFYRDP-GRA-LSD 367
Query: 310 ANECK 314
C+
Sbjct: 368 RRACR 372
Score = 229 (85.7 bits), Expect = 1.9e-52, Sum P(2) = 1.9e-52
Identities = 51/115 (44%), Positives = 65/115 (56%)
Query: 25 SDPCYENG-RPRRCIPDFVNAAFGQEVKVNSVCGLESPERYCDTSGACHVCDAGSPRGRF 83
+DPC+++G PR C+P VNAA G+EV +S CG P A CDA PR
Sbjct: 27 ADPCHDDGGAPRGCVPGLVNAALGREVLASSTCG--RP--------ATRACDASDPRRAH 76
Query: 84 PAEYLTDLNNPSNVTCWRSEAQTSVNSLSASPDNVTLTLSLGKKFELTYISLSFC 138
PA LT ++ CWRS++ T V P NVTLT+ LGK FEL ++SL FC
Sbjct: 77 PAALLTSAGGTASPVCWRSDSLTQV------PHNVTLTVPLGKAFELVFVSLRFC 125
Score = 154 (59.3 bits), Expect = 4.9e-31, Sum P(2) = 4.9e-31
Identities = 37/105 (35%), Positives = 46/105 (43%)
Query: 202 CKCNGHASRC--------IKSPQGELVC-ECRHNTAGKDCEKCKPFFSDRPWGRATVYDA 252
C CNGHA RC + + VC CRHNTAG+ C C+ F P GRA + D
Sbjct: 311 CSCNGHARRCRFNMELYRLSGRRSGGVCLNCRHNTAGRHCHYCREGFYRDP-GRA-LSDR 368
Query: 253 NECKGGRCKCNGHASRCIKSPQGALVCECRHNTAGKDCEKCKPFF 297
C+ C G A + G C C+ G C +C P F
Sbjct: 369 RACRACDCHPVGAAGKTCNQTTGQ--CPCKDGVTGLTCNRCAPGF 411
Score = 65 (27.9 bits), Expect = 1.0e-21, Sum P(2) = 1.0e-21
Identities = 30/120 (25%), Positives = 43/120 (35%)
Query: 184 GNEQEALCTD-RHKKQGGRCK-CN-GH---ASRCIKSPQGELVCECRH-NTAGKDCEKCK 236
G +C + RH G C C G R + + C+C AGK C +
Sbjct: 331 GRRSGGVCLNCRHNTAGRHCHYCREGFYRDPGRALSDRRACRACDCHPVGAAGKTCNQTT 390
Query: 237 PFFSDRPWGRATVYDANECKGGRCKCNGHASRCIKSPQGALVCECRHNTAGKDCE-KCKP 295
+ G T N C G + + C+K+P E A +DC+ CKP
Sbjct: 391 GQCPCKD-G-VTGLTCNRCAPGFQQSRSPVAPCVKTPVPGPTEESSP-VAPQDCDLHCKP 447
Score = 48 (22.0 bits), Expect = 3.3e-47, Sum P(2) = 3.3e-47
Identities = 14/32 (43%), Positives = 17/32 (53%)
Query: 8 CVPLLIGAVCGEKIDLNSDPCYENGRP--RRC 37
CVP L+ A G ++ L S C GRP R C
Sbjct: 40 CVPGLVNAALGREV-LASSTC---GRPATRAC 67
>UNIPROTKB|E2R3Q6 [details] [associations]
symbol:NTN3 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005794 "Golgi apparatus" evidence=IEA]
[GO:0005576 "extracellular region" evidence=IEA] [GO:0005102
"receptor binding" evidence=IEA] InterPro:IPR001134 PROSITE:PS50189
GO:GO:0005794 GO:GO:0005576 InterPro:IPR002049 InterPro:IPR008993
Pfam:PF00053 SMART:SM00180 SUPFAM:SSF50242 PROSITE:PS01248
PROSITE:PS50027 InterPro:IPR018933 Pfam:PF01759 SMART:SM00643
InterPro:IPR008211 Pfam:PF00055 SMART:SM00136 PROSITE:PS51117
CTD:4917 KO:K06844 OMA:TASPLCW GeneTree:ENSGT00700000104042
EMBL:AAEX03004613 RefSeq:XP_537003.3 Ensembl:ENSCAFT00000030773
GeneID:479878 KEGG:cfa:479878 NextBio:20854992 Uniprot:E2R3Q6
Length = 577
Score = 457 (165.9 bits), Expect = 1.4e-46, Sum P(2) = 1.4e-46
Identities = 116/277 (41%), Positives = 147/277 (53%)
Query: 52 VNSVCGLESPERYCDTSGACHVCDAGSPRGRFPAEYLTDLNNPSNVTCWRSEAQTSVNSL 111
VN+ G E A CDA PR PA LT + +N CWRSEA L
Sbjct: 45 VNAALGREVLASSTCGRPATRACDASDPRRAHPAALLTSAGSTTNPVCWRSEA------L 98
Query: 112 SASPDNVTLTLSLGKKFELTYISLSFCPKSIKPDSLAIYKSQDFGKSWQPLQFYSSQCKK 171
+ +P NVTLT+ LGK FEL ++SL FC S P S+A+ KSQD G+SW PL F+SS+C+
Sbjct: 99 TQAPHNVTLTVPLGKAFELVFVSLRFC--SAPPASVALLKSQDHGRSWAPLGFFSSRCRL 156
Query: 172 LYGRT-ATGVISRGNEQEALCTDRHKKQ--GGRCKCNGHASRCIK--SPQG-ELVCE--C 223
YGR A G EALC + Q GG G + ++ SP G +L
Sbjct: 157 DYGRPPAPADGPAGPGPEALCFPEPQVQPDGG-----GLLAFSVQDGSPPGLDLDSSPVL 211
Query: 224 RHNTAGKDCEKC--KP-FFSDRPWGRAT---VYDANECK-GGRCKCNGHASRCIKSPQGA 276
+ D + +P D AT Y A E + GGRCKCNGHASRC+ QG
Sbjct: 212 QDWVTATDIQVVLTRPAVLGDSRDSIATGPYSYSATELQVGGRCKCNGHASRCLLDTQGH 271
Query: 277 LVCECRHNTAGKDCEKCKPFFSDRPWGRATVYDANEC 313
L+C+C+H T G DC +CKPF+ DRPW RAT +A+ C
Sbjct: 272 LICDCQHGTEGPDCGRCKPFYCDRPWQRATAREAHAC 308
Score = 331 (121.6 bits), Expect = 3.0e-52, Sum P(2) = 3.0e-52
Identities = 62/125 (49%), Positives = 76/125 (60%)
Query: 199 GGRCKCNGHASRCIKSPQGELVCECRHNTAGKDCEKCKPFFSDRPWGRATVYDANECKGG 258
GGRCKCNGHASRC+ QG L+C+C+H T G DC +CKPF+ DRPW RAT +A+ C
Sbjct: 252 GGRCKCNGHASRCLLDTQGHLICDCQHGTEGPDCGRCKPFYCDRPWQRATAREAHACLA- 310
Query: 259 RCKCNGHASRC--------IKSPQGALVC-ECRHNTAGKDCEKCKPFFSDRPWGRATVYD 309
C CNGHA RC + + VC CRHNTAG+ C C+ F P GRA + D
Sbjct: 311 -CSCNGHARRCRFNMELYRLSGRRSGGVCLNCRHNTAGRHCHYCREGFYRDP-GRA-LSD 367
Query: 310 ANECK 314
C+
Sbjct: 368 RRACR 372
Score = 239 (89.2 bits), Expect = 3.0e-52, Sum P(2) = 3.0e-52
Identities = 53/115 (46%), Positives = 67/115 (58%)
Query: 25 SDPCYENG-RPRRCIPDFVNAAFGQEVKVNSVCGLESPERYCDTSGACHVCDAGSPRGRF 83
+DPC+++G PR C+P VNAA G+EV +S CG P A CDA PR
Sbjct: 27 ADPCHDDGGAPRGCVPGLVNAALGREVLASSTCG--RP--------ATRACDASDPRRAH 76
Query: 84 PAEYLTDLNNPSNVTCWRSEAQTSVNSLSASPDNVTLTLSLGKKFELTYISLSFC 138
PA LT + +N CWRSEA L+ +P NVTLT+ LGK FEL ++SL FC
Sbjct: 77 PAALLTSAGSTTNPVCWRSEA------LTQAPHNVTLTVPLGKAFELVFVSLRFC 125
Score = 154 (59.3 bits), Expect = 4.4e-33, Sum P(2) = 4.4e-33
Identities = 37/105 (35%), Positives = 46/105 (43%)
Query: 202 CKCNGHASRC--------IKSPQGELVC-ECRHNTAGKDCEKCKPFFSDRPWGRATVYDA 252
C CNGHA RC + + VC CRHNTAG+ C C+ F P GRA + D
Sbjct: 311 CSCNGHARRCRFNMELYRLSGRRSGGVCLNCRHNTAGRHCHYCREGFYRDP-GRA-LSDR 368
Query: 253 NECKGGRCKCNGHASRCIKSPQGALVCECRHNTAGKDCEKCKPFF 297
C+ C G A + G C C+ G C +C P F
Sbjct: 369 RACRACDCHPVGAAGKTCNQTTGQ--CPCKDGVTGLTCNRCAPGF 411
Score = 61 (26.5 bits), Expect = 2.4e-23, Sum P(2) = 2.4e-23
Identities = 29/120 (24%), Positives = 42/120 (35%)
Query: 184 GNEQEALCTD-RHKKQGGRCK-CN-GH---ASRCIKSPQGELVCECRH-NTAGKDCEKCK 236
G +C + RH G C C G R + + C+C AGK C +
Sbjct: 331 GRRSGGVCLNCRHNTAGRHCHYCREGFYRDPGRALSDRRACRACDCHPVGAAGKTCNQTT 390
Query: 237 PFFSDRPWGRATVYDANECKGGRCKCNGHASRCIKSPQGALVCECRHNTAGKDCEK-CKP 295
+ G T N C G + + C+K+P E +DC+ CKP
Sbjct: 391 GQCPCKD-G-VTGLTCNRCAPGFQQSRSPVAPCVKTPVPGPTEESSP-VEPQDCDSHCKP 447
Score = 48 (22.0 bits), Expect = 1.4e-46, Sum P(2) = 1.4e-46
Identities = 14/32 (43%), Positives = 17/32 (53%)
Query: 8 CVPLLIGAVCGEKIDLNSDPCYENGRP--RRC 37
CVP L+ A G ++ L S C GRP R C
Sbjct: 40 CVPGLVNAALGREV-LASSTC---GRPATRAC 67
>UNIPROTKB|O00634 [details] [associations]
symbol:NTN3 "Netrin-3" species:9606 "Homo sapiens"
[GO:0005102 "receptor binding" evidence=IEA] [GO:0005794 "Golgi
apparatus" evidence=IEA] [GO:0005578 "proteinaceous extracellular
matrix" evidence=IEA] [GO:0007411 "axon guidance" evidence=NAS]
[GO:0005575 "cellular_component" evidence=ND] [GO:0003674
"molecular_function" evidence=ND] [GO:0042692 "muscle cell
differentiation" evidence=TAS] [GO:0051149 "positive regulation of
muscle cell differentiation" evidence=TAS] InterPro:IPR001134
PROSITE:PS50189 GO:GO:0005794 Reactome:REACT_111045 GO:GO:0007411
GO:GO:0005578 PROSITE:PS00022 GO:GO:0042692 GO:GO:0051149
PROSITE:PS01186 InterPro:IPR002049 InterPro:IPR008993 Pfam:PF00053
SMART:SM00180 SUPFAM:SSF50242 PROSITE:PS01248 PROSITE:PS50027
InterPro:IPR018933 Pfam:PF01759 SMART:SM00643 InterPro:IPR008211
Pfam:PF00055 SMART:SM00136 PROSITE:PS51117 HOVERGEN:HBG006464
eggNOG:NOG244580 HOGENOM:HOG000286017 OrthoDB:EOG4VHK67 EMBL:U86759
EMBL:U86758 IPI:IPI00006193 RefSeq:NP_006172.1 UniGene:Hs.158336
ProteinModelPortal:O00634 SMR:O00634 STRING:O00634 PaxDb:O00634
PRIDE:O00634 Ensembl:ENST00000293973 GeneID:4917 KEGG:hsa:4917
UCSC:uc002cqj.3 CTD:4917 GeneCards:GC16P002521 HGNC:HGNC:8030
MIM:602349 neXtProt:NX_O00634 PharmGKB:PA164724231
InParanoid:O00634 KO:K06844 OMA:TASPLCW PhylomeDB:O00634
GenomeRNAi:4917 NextBio:18935 Bgee:O00634 CleanEx:HS_NTN3
Genevestigator:O00634 GermOnline:ENSG00000162068 Uniprot:O00634
Length = 580
Score = 332 (121.9 bits), Expect = 3.8e-52, Sum P(2) = 3.8e-52
Identities = 62/125 (49%), Positives = 76/125 (60%)
Query: 199 GGRCKCNGHASRCIKSPQGELVCECRHNTAGKDCEKCKPFFSDRPWGRATVYDANECKGG 258
GGRCKCNGHASRC+ QG L+C+CRH T G DC +CKPF+ DRPW RAT +++ C
Sbjct: 252 GGRCKCNGHASRCLLDTQGHLICDCRHGTEGPDCGRCKPFYCDRPWQRATARESHACLA- 310
Query: 259 RCKCNGHASRC--------IKSPQGALVC-ECRHNTAGKDCEKCKPFFSDRPWGRATVYD 309
C CNGHA RC + + VC CRHNTAG+ C C+ F P GRA + D
Sbjct: 311 -CSCNGHARRCRFNMELYRLSGRRSGGVCLNCRHNTAGRHCHYCREGFYRDP-GRA-LSD 367
Query: 310 ANECK 314
C+
Sbjct: 368 RRACR 372
Score = 237 (88.5 bits), Expect = 3.8e-52, Sum P(2) = 3.8e-52
Identities = 61/141 (43%), Positives = 72/141 (51%)
Query: 52 VNSVCGLESPERYCDTSGACHVCDAGSPRGRFPAEYLTDLNNPSNVTCWRSEAQTSVNSL 111
VN+ G E A CDA PR LT ++ CWRSE SL
Sbjct: 45 VNAALGREVLASSTCGRPATRACDASDPRRAHSPALLTSPGGTASPLCWRSE------SL 98
Query: 112 SASPDNVTLTLSLGKKFELTYISLSFCPKSIKPDSLAIYKSQDFGKSWQPLQFYSSQCKK 171
+P NVTLT+ LGK FEL ++SL FC S P S+A+ KSQD G+SW PL F+SS C
Sbjct: 99 PRAPLNVTLTVPLGKAFELVFVSLRFC--SAPPASVALLKSQDHGRSWAPLGFFSSHCDL 156
Query: 172 LYGRT-ATGVISRGNEQEALC 191
YGR A G EALC
Sbjct: 157 DYGRLPAPANGPAGPGPEALC 177
Score = 214 (80.4 bits), Expect = 1.0e-49, Sum P(2) = 1.0e-49
Identities = 51/115 (44%), Positives = 62/115 (53%)
Query: 25 SDPCY-ENGRPRRCIPDFVNAAFGQEVKVNSVCGLESPERYCDTSGACHVCDAGSPRGRF 83
+DPC+ E G PR C+P VNAA G+EV +S CG P A CDA PR
Sbjct: 27 ADPCHDEGGAPRGCVPGLVNAALGREVLASSTCG--RP--------ATRACDASDPRRAH 76
Query: 84 PAEYLTDLNNPSNVTCWRSEAQTSVNSLSASPDNVTLTLSLGKKFELTYISLSFC 138
LT ++ CWRSE SL +P NVTLT+ LGK FEL ++SL FC
Sbjct: 77 SPALLTSPGGTASPLCWRSE------SLPRAPLNVTLTVPLGKAFELVFVSLRFC 125
Score = 154 (59.3 bits), Expect = 7.5e-33, Sum P(2) = 7.5e-33
Identities = 37/105 (35%), Positives = 46/105 (43%)
Query: 202 CKCNGHASRC--------IKSPQGELVC-ECRHNTAGKDCEKCKPFFSDRPWGRATVYDA 252
C CNGHA RC + + VC CRHNTAG+ C C+ F P GRA + D
Sbjct: 311 CSCNGHARRCRFNMELYRLSGRRSGGVCLNCRHNTAGRHCHYCREGFYRDP-GRA-LSDR 368
Query: 253 NECKGGRCKCNGHASRCIKSPQGALVCECRHNTAGKDCEKCKPFF 297
C+ C G A + G C C+ G C +C P F
Sbjct: 369 RACRACDCHPVGAAGKTCNQTTGQ--CPCKDGVTGLTCNRCAPGF 411
Score = 61 (26.5 bits), Expect = 4.0e-23, Sum P(2) = 4.0e-23
Identities = 29/120 (24%), Positives = 42/120 (35%)
Query: 184 GNEQEALCTD-RHKKQGGRCK-CN-GH---ASRCIKSPQGELVCECRH-NTAGKDCEKCK 236
G +C + RH G C C G R + + C+C AGK C +
Sbjct: 331 GRRSGGVCLNCRHNTAGRHCHYCREGFYRDPGRALSDRRACRACDCHPVGAAGKTCNQTT 390
Query: 237 PFFSDRPWGRATVYDANECKGGRCKCNGHASRCIKSPQGALVCECRHNTAGKDCEK-CKP 295
+ G T N C G + + C+K+P E +DC+ CKP
Sbjct: 391 GQCPCKD-G-VTGLTCNRCAPGFQQSRSPVAPCVKTPIPGPT-EDSSPVQPQDCDSHCKP 447
Score = 48 (22.0 bits), Expect = 2.7e-32, Sum P(2) = 2.7e-32
Identities = 14/32 (43%), Positives = 17/32 (53%)
Query: 8 CVPLLIGAVCGEKIDLNSDPCYENGRP--RRC 37
CVP L+ A G ++ L S C GRP R C
Sbjct: 40 CVPGLVNAALGREV-LASSTC---GRPATRAC 67
>UNIPROTKB|F1MD77 [details] [associations]
symbol:LAMC1 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0043259 "laminin-10 complex" evidence=IEA] [GO:0043208
"glycosphingolipid binding" evidence=IEA] [GO:0034446 "substrate
adhesion-dependent cell spreading" evidence=IEA] [GO:0031581
"hemidesmosome assembly" evidence=IEA] [GO:0031175 "neuron
projection development" evidence=IEA] [GO:0022617 "extracellular
matrix disassembly" evidence=IEA] [GO:0016477 "cell migration"
evidence=IEA] [GO:0006461 "protein complex assembly" evidence=IEA]
[GO:0005201 "extracellular matrix structural constituent"
evidence=IEA] GO:GO:0016477 GO:GO:0006461 InterPro:IPR013032
PROSITE:PS00022 InterPro:IPR002049 Pfam:PF00053 SMART:SM00180
PROSITE:PS01248 PROSITE:PS50027 GO:GO:0034446 GO:GO:0031175
GO:GO:0031581 GO:GO:0022617 GO:GO:0005201 GO:GO:0043208
InterPro:IPR018031 InterPro:IPR000034 InterPro:IPR008211
Pfam:PF00052 Pfam:PF00055 SMART:SM00281 SMART:SM00136
PROSITE:PS51115 PROSITE:PS51117 GeneTree:ENSGT00690000102103
GO:GO:0043259 OMA:EATDYPW EMBL:DAAA02043571 EMBL:DAAA02043567
EMBL:DAAA02043568 EMBL:DAAA02043569 EMBL:DAAA02043570
IPI:IPI01018593 UniGene:Bt.19081 Ensembl:ENSBTAT00000015881
Uniprot:F1MD77
Length = 1608
Score = 550 (198.7 bits), Expect = 1.0e-51, P = 1.0e-51
Identities = 126/309 (40%), Positives = 169/309 (54%)
Query: 26 DPCY-ENGRPRRCIPDFVNAAFGQEVKVNSVCGLESPERYCDTSG------ACHVCDAGS 78
D C E GRP+RC+P+FVNAAF V + CG PE YC +G +CH+CDAG
Sbjct: 37 DECTDEGGRPQRCMPEFVNAAFNVTVVATNTCGTP-PEEYCVQTGVTGVTKSCHLCDAGQ 95
Query: 79 PRGRFPAEYLTDLNNPSNVTCWRSEAQTSVNSLSASPDNVTLTLSLGKKFELTYISLSFC 138
P + A +LTD NN ++ T W+S QT + + P+++ LTL LGK F++TY+ L F
Sbjct: 96 PHLQHGAAFLTDYNNQADTTWWQS--QTMLAGVQY-PNSINLTLHLGKAFDITYVRLKF- 151
Query: 139 PKSIKPDSLAIYKSQDFGKSWQPLQFYSSQCKKLYGRTATGVI-SRGNEQEALCTDRHKK 197
+ +P+S AIYK W P Q+YS C+ Y + G I + G+EQ+ALCTD
Sbjct: 152 -HTSRPESFAIYKRTREDGPWIPYQYYSGSCENTYSKATRGFIRTGGDEQQALCTDEFSD 210
Query: 198 ----QGGRCKCN---GHAS--RCIKSP--QGELVCECRHNTAGKDCEKCKPFFSDRPWGR 246
GG + G S SP Q + T + F+D +
Sbjct: 211 ISPLTGGNVAFSTLEGRPSAYNFDNSPVLQEWVTATDIRVTLNRLNTFGDEVFNDPKVLK 270
Query: 247 ATVYDANE-CKGGRCKCNGHASRCIKSPQGALVCECRHNTAGKDCEKCKPFFSDRPWGRA 305
+ Y ++ GGRCKCNGHAS C+K+ LVC C+HNT G DCEKC PFF+DRPW RA
Sbjct: 271 SYYYAISDFAVGGRCKCNGHASECVKNEFDKLVCNCKHNTYGVDCEKCLPFFNDRPWRRA 330
Query: 306 TVYDANECK 314
T A+EC+
Sbjct: 331 TAESASECQ 339
Score = 304 (112.1 bits), Expect = 1.6e-25, P = 1.6e-25
Identities = 54/106 (50%), Positives = 66/106 (62%)
Query: 199 GGRCKCNGHASRCIKSPQGELVCECRHNTAGKDCEKCKPFFSDRPWGRATVYDANECKGG 258
GGRCKCNGHAS C+K+ +LVC C+HNT G DCEKC PFF+DRPW RAT A+EC+
Sbjct: 282 GGRCKCNGHASECVKNEFDKLVCNCKHNTYGVDCEKCLPFFNDRPWRRATAESASECQP- 340
Query: 259 RCKCNGHASRCIKSPQ-------GALVCECRHNTAGKDCEKCKPFF 297
C CNG + C P+ G C+ NT G CE+C+ F
Sbjct: 341 -CDCNGRSQECYFDPELYRSTGHGGHCTNCQDNTDGAKCERCRENF 385
Score = 163 (62.4 bits), Expect = 7.3e-08, Sum P(2) = 7.3e-08
Identities = 40/104 (38%), Positives = 52/104 (50%)
Query: 202 CKCNGHASRCIKSPQGELVCECRHNTAGKDCEKCKPFFSDRPWGRATVYDANECKGGRCK 261
C CNGH+ C P+ VC CR NTAG +CEKC SD +G +T + +C+ C
Sbjct: 723 CTCNGHSETC--DPESG-VCNCRDNTAGPNCEKC----SDGYYGDSTAGTSLDCQP--CP 773
Query: 262 CNGHASRCIKSPQGALVC-ECRHNTAGKDCEKCKP-FFSDRPWG 303
C G +S + +VC C T G+ CE C F D P G
Sbjct: 774 CPGGSSCAVVPKTQEVVCTNCPTGTTGRRCELCDDGHFGD-PLG 816
Score = 39 (18.8 bits), Expect = 7.3e-08, Sum P(2) = 7.3e-08
Identities = 15/48 (31%), Positives = 21/48 (43%)
Query: 16 VCGEKID-LNSDPC------YENGRPRRCIPDFVNAAFGQE-VKVNSV 55
VC + ++ N + C E+ PR C P F FG V N+V
Sbjct: 463 VCKDNVEGFNCERCKPGFFNLESSNPRGCTPCF---CFGHSSVCTNAV 507
>UNIPROTKB|F1MAA7 [details] [associations]
symbol:Lamc1 "Protein Lamc1" species:10116 "Rattus
norvegicus" [GO:0005201 "extracellular matrix structural
constituent" evidence=IEA] [GO:0006461 "protein complex assembly"
evidence=IEA] [GO:0016477 "cell migration" evidence=IEA]
[GO:0022617 "extracellular matrix disassembly" evidence=IEA]
[GO:0031175 "neuron projection development" evidence=IEA]
[GO:0031581 "hemidesmosome assembly" evidence=IEA] [GO:0034446
"substrate adhesion-dependent cell spreading" evidence=IEA]
[GO:0043208 "glycosphingolipid binding" evidence=IEA] [GO:0043259
"laminin-10 complex" evidence=IEA] RGD:621052 GO:GO:0016477
GO:GO:0006461 InterPro:IPR013032 PROSITE:PS00022 InterPro:IPR002049
Pfam:PF00053 SMART:SM00180 PROSITE:PS01248 PROSITE:PS50027
GO:GO:0034446 GO:GO:0031175 GO:GO:0031581 GO:GO:0022617
GO:GO:0005201 GO:GO:0043208 InterPro:IPR018031 InterPro:IPR000034
InterPro:IPR008211 Pfam:PF00052 Pfam:PF00055 SMART:SM00281
SMART:SM00136 PROSITE:PS51115 PROSITE:PS51117
GeneTree:ENSGT00690000102103 GO:GO:0043259 CTD:3915 KO:K05635
OMA:EATDYPW IPI:IPI00363849 RefSeq:NP_446418.1 UniGene:Rn.7145
ProteinModelPortal:F1MAA7 Ensembl:ENSRNOT00000003605 GeneID:117036
KEGG:rno:117036 NextBio:619829 Uniprot:F1MAA7
Length = 1607
Score = 548 (198.0 bits), Expect = 1.6e-51, P = 1.6e-51
Identities = 129/327 (39%), Positives = 175/327 (53%)
Query: 7 LCVPLLIGAVCGEKIDLNSDPCY-ENGRPRRCIPDFVNAAFGQEVKVNSVCGLESPERYC 65
L + +L C + + D C E GRP+RC+P+FVNAAF V + CG PE YC
Sbjct: 19 LLLAVLAAVACWVRAAM--DECADEGGRPQRCMPEFVNAAFNVTVVATNTCGTP-PEEYC 75
Query: 66 DTSG------ACHVCDAGSPRGRFPAEYLTDLNNPSNVTCWRSEAQTSVNSLSASPDNVT 119
+G +CH+CDAG + A +LTD NN ++ T W+S QT + + P+++
Sbjct: 76 VQTGVTGVTKSCHLCDAGQLHLQHGAAFLTDYNNQADTTWWQS--QTMLAGVQY-PNSIN 132
Query: 120 LTLSLGKKFELTYISLSFCPKSIKPDSLAIYKSQDFGKSWQPLQFYSSQCKKLYGRTATG 179
LTL LGK F++TY+ L F + +P+S AIYK W P Q+YS C+ Y + G
Sbjct: 133 LTLHLGKAFDITYVRLKF--HTSRPESFAIYKRTREDGPWIPYQYYSGSCENTYSKANRG 190
Query: 180 VI-SRGNEQEALCTDRHKK----QGGRCKCN---GHAS--RCIKSP--QGELVCECRHNT 227
I + G+EQ+ALCTD GG + G S SP Q + T
Sbjct: 191 FIRTGGDEQQALCTDEFSDISPLTGGNVAFSTLEGRPSAYNFDNSPVLQEWVTATDIRVT 250
Query: 228 AGKDCEKCKPFFSDRPWGRATVYDANE-CKGGRCKCNGHASRCIKSPQGALVCECRHNTA 286
+ F+D ++ Y ++ GGRCKCNGHAS C+K+ G LVC C+HNT
Sbjct: 251 LNRLNTFGDEVFNDPKVLKSYYYAISDFAVGGRCKCNGHASECVKNEFGKLVCNCKHNTY 310
Query: 287 GKDCEKCKPFFSDRPWGRATVYDANEC 313
G DCEKC PFF+DRPW RAT AN+C
Sbjct: 311 GVDCEKCLPFFNDRPWRRATAESANQC 337
Score = 314 (115.6 bits), Expect = 1.4e-26, P = 1.4e-26
Identities = 56/106 (52%), Positives = 66/106 (62%)
Query: 199 GGRCKCNGHASRCIKSPQGELVCECRHNTAGKDCEKCKPFFSDRPWGRATVYDANECKGG 258
GGRCKCNGHAS C+K+ G+LVC C+HNT G DCEKC PFF+DRPW RAT AN+C
Sbjct: 281 GGRCKCNGHASECVKNEFGKLVCNCKHNTYGVDCEKCLPFFNDRPWRRATAESANQCLP- 339
Query: 259 RCKCNGHASRCIKSPQ-------GALVCECRHNTAGKDCEKCKPFF 297
C CNG + C P+ G CR NT G CE+C+ F
Sbjct: 340 -CDCNGRSQECYFDPELYRSTGHGGHCTNCRDNTDGAKCERCRENF 384
Score = 178 (67.7 bits), Expect = 3.0e-10, P = 3.0e-10
Identities = 43/104 (41%), Positives = 56/104 (53%)
Query: 202 CKCNGHASRCIKSPQGELVCECRHNTAGKDCEKCKPFFSDRPWGRATVYDANECKGGRCK 261
C CNGH+ C P+ VC+CR NTAG CEKC SD +G +T+ +++C+ C
Sbjct: 722 CTCNGHSETC--DPETG-VCDCRDNTAGPHCEKC----SDGYYGDSTLGTSSDCQP--CP 772
Query: 262 CNGHASRCIKSPQGALVC-ECRHNTAGKDCEKCKP-FFSDRPWG 303
C G +S I +VC C TAGK CE C +F D P G
Sbjct: 773 CPGGSSCAIVPKTKEVVCTHCPTGTAGKRCELCDDGYFGD-PLG 815
Score = 136 (52.9 bits), Expect = 1.6e-05, P = 1.6e-05
Identities = 34/94 (36%), Positives = 47/94 (50%)
Query: 221 CECRHNTAGKDCEKCKPFFSDRPWGRATVYDANECKGGRCKCNGHASRCIKSPQGALVCE 280
C C G+ CE C P + R Y + C C CNGH+ C P+ VC+
Sbjct: 688 CTCPVGYGGQFCETCLPGYR-RETPSLGPY--SPCV--LCTCNGHSETC--DPETG-VCD 739
Query: 281 CRHNTAGKDCEKCKPFFSDRPWGRATVYDANECK 314
CR NTAG CEKC SD +G +T+ +++C+
Sbjct: 740 CRDNTAGPHCEKC----SDGYYGDSTLGTSSDCQ 769
>UNIPROTKB|F1SUI0 [details] [associations]
symbol:NTN3 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005794 "Golgi apparatus" evidence=IEA] [GO:0005576
"extracellular region" evidence=IEA] [GO:0005102 "receptor binding"
evidence=IEA] InterPro:IPR001134 PROSITE:PS50189 GO:GO:0005794
GO:GO:0005576 InterPro:IPR002049 InterPro:IPR008993 Pfam:PF00053
SMART:SM00180 SUPFAM:SSF50242 PROSITE:PS01248 PROSITE:PS50027
InterPro:IPR018933 Pfam:PF01759 SMART:SM00643 InterPro:IPR008211
Pfam:PF00055 SMART:SM00136 PROSITE:PS51117 CTD:4917 KO:K06844
GeneTree:ENSGT00700000104042 OMA:RAHPASY EMBL:FP102361
RefSeq:XP_003354720.1 Ensembl:ENSSSCT00000008826 GeneID:100622906
KEGG:ssc:100622906 Uniprot:F1SUI0
Length = 580
Score = 449 (163.1 bits), Expect = 9.7e-46, Sum P(2) = 9.7e-46
Identities = 114/277 (41%), Positives = 144/277 (51%)
Query: 52 VNSVCGLESPERYCDTSGACHVCDAGSPRGRFPAEYLTDLNNPSNVTCWRSEAQTSVNSL 111
VN+ G E A CDA PR PA LT ++ CWRS++ T V
Sbjct: 45 VNAALGREVLASSTCGRPATRACDASDPRRAHPAALLTSAGGTASPVCWRSDSLTQV--- 101
Query: 112 SASPDNVTLTLSLGKKFELTYISLSFCPKSIKPDSLAIYKSQDFGKSWQPLQFYSSQCKK 171
P NVTLT+ LGK FEL ++SL FC S P S+A+ KSQD G+SW PL F+SS+C
Sbjct: 102 ---PLNVTLTVPLGKAFELVFVSLRFC--SAPPTSVALLKSQDHGRSWAPLGFFSSRCGL 156
Query: 172 LYGRTATGVIS-RGNEQEALCTDRHKKQ--GGRCKCNGHASRCIK--SPQG-ELVCE--C 223
YGR V G EALC + Q GG G + ++ SP G +L
Sbjct: 157 DYGRLPAPVDGPAGPGPEALCFPEPQAQPDGG-----GLLAFSVQDGSPPGLDLDSSPVL 211
Query: 224 RHNTAGKDCEKC--KP-FFSDRPWGRATV---YDANECK-GGRCKCNGHASRCIKSPQGA 276
+ D + +P D A V Y A E + GGRCKCNGHAS+C+ QG
Sbjct: 212 QDWVTATDIQVVLTRPTVLGDTRDAAAVVSYSYSATELQVGGRCKCNGHASKCLLDTQGH 271
Query: 277 LVCECRHNTAGKDCEKCKPFFSDRPWGRATVYDANEC 313
L+C+CRH T G DC +CKPF+ DRPW RAT +A+ C
Sbjct: 272 LICDCRHGTEGPDCGRCKPFYCDRPWQRATAREAHAC 308
Score = 332 (121.9 bits), Expect = 3.4e-51, Sum P(2) = 3.4e-51
Identities = 62/125 (49%), Positives = 76/125 (60%)
Query: 199 GGRCKCNGHASRCIKSPQGELVCECRHNTAGKDCEKCKPFFSDRPWGRATVYDANECKGG 258
GGRCKCNGHAS+C+ QG L+C+CRH T G DC +CKPF+ DRPW RAT +A+ C
Sbjct: 252 GGRCKCNGHASKCLLDTQGHLICDCRHGTEGPDCGRCKPFYCDRPWQRATAREAHACLA- 310
Query: 259 RCKCNGHASRC--------IKSPQGALVC-ECRHNTAGKDCEKCKPFFSDRPWGRATVYD 309
C CNGHA RC + + VC CRHNTAG+ C C+ F P GRA + D
Sbjct: 311 -CSCNGHARRCRFNMELYRLSGRRSGGVCLNCRHNTAGRHCHYCREGFYRDP-GRA-LSD 367
Query: 310 ANECK 314
C+
Sbjct: 368 RRACR 372
Score = 228 (85.3 bits), Expect = 3.4e-51, Sum P(2) = 3.4e-51
Identities = 52/115 (45%), Positives = 64/115 (55%)
Query: 25 SDPCY-ENGRPRRCIPDFVNAAFGQEVKVNSVCGLESPERYCDTSGACHVCDAGSPRGRF 83
+DPC+ E G PR C+P VNAA G+EV +S CG P A CDA PR
Sbjct: 27 ADPCHDEGGAPRGCVPGLVNAALGREVLASSTCG--RP--------ATRACDASDPRRAH 76
Query: 84 PAEYLTDLNNPSNVTCWRSEAQTSVNSLSASPDNVTLTLSLGKKFELTYISLSFC 138
PA LT ++ CWRS++ T V P NVTLT+ LGK FEL ++SL FC
Sbjct: 77 PAALLTSAGGTASPVCWRSDSLTQV------PLNVTLTVPLGKAFELVFVSLRFC 125
Score = 154 (59.3 bits), Expect = 1.1e-30, Sum P(2) = 1.1e-30
Identities = 37/105 (35%), Positives = 46/105 (43%)
Query: 202 CKCNGHASRC--------IKSPQGELVC-ECRHNTAGKDCEKCKPFFSDRPWGRATVYDA 252
C CNGHA RC + + VC CRHNTAG+ C C+ F P GRA + D
Sbjct: 311 CSCNGHARRCRFNMELYRLSGRRSGGVCLNCRHNTAGRHCHYCREGFYRDP-GRA-LSDR 368
Query: 253 NECKGGRCKCNGHASRCIKSPQGALVCECRHNTAGKDCEKCKPFF 297
C+ C G A + G C C+ G C +C P F
Sbjct: 369 RACRACDCHPVGAAGKTCNQTTGQ--CPCKDGVTGLTCNRCAPGF 411
Score = 62 (26.9 bits), Expect = 4.6e-21, Sum P(2) = 4.6e-21
Identities = 29/120 (24%), Positives = 43/120 (35%)
Query: 184 GNEQEALCTD-RHKKQGGRCK-CN-GH---ASRCIKSPQGELVCECRH-NTAGKDCEKCK 236
G +C + RH G C C G R + + C+C AGK C +
Sbjct: 331 GRRSGGVCLNCRHNTAGRHCHYCREGFYRDPGRALSDRRACRACDCHPVGAAGKTCNQTT 390
Query: 237 PFFSDRPWGRATVYDANECKGGRCKCNGHASRCIKSPQGALVCECRHNTAGKDCE-KCKP 295
+ G T N C G + + C+K+P E + +DC+ CKP
Sbjct: 391 GQCPCKD-G-VTGLTCNRCAPGFQQSRSPVAPCVKTPVPGPTEES-NPVEPQDCDLHCKP 447
Score = 48 (22.0 bits), Expect = 9.7e-46, Sum P(2) = 9.7e-46
Identities = 14/32 (43%), Positives = 17/32 (53%)
Query: 8 CVPLLIGAVCGEKIDLNSDPCYENGRP--RRC 37
CVP L+ A G ++ L S C GRP R C
Sbjct: 40 CVPGLVNAALGREV-LASSTC---GRPATRAC 67
>ZFIN|ZDB-GENE-021226-3 [details] [associations]
symbol:lamc1 "laminin, gamma 1" species:7955 "Danio
rerio" [GO:0007519 "skeletal muscle tissue development"
evidence=IMP] [GO:0007634 "optokinetic behavior" evidence=IMP]
[GO:0050908 "detection of light stimulus involved in visual
perception" evidence=IMP] [GO:0007517 "muscle organ development"
evidence=IMP] [GO:0031290 "retinal ganglion cell axon guidance"
evidence=IMP] [GO:0005604 "basement membrane" evidence=IEA]
[GO:0005576 "extracellular region" evidence=IEA] [GO:0007155 "cell
adhesion" evidence=IEA] [GO:0005578 "proteinaceous extracellular
matrix" evidence=IEA] ZFIN:ZDB-GENE-021226-3 GO:GO:0007155
PROSITE:PS00022 GO:GO:0007517 PROSITE:PS01186 InterPro:IPR002049
Pfam:PF00053 SMART:SM00180 PROSITE:PS01248 PROSITE:PS50027
GO:GO:0005604 GO:GO:0050908 GO:GO:0031290 InterPro:IPR018031
InterPro:IPR000034 InterPro:IPR008211 Pfam:PF00052 Pfam:PF00055
SMART:SM00281 SMART:SM00136 PROSITE:PS51115 PROSITE:PS51117
GO:GO:0007634 eggNOG:NOG235720 GeneTree:ENSGT00690000102103
HOGENOM:HOG000019301 EMBL:AF468048 EMBL:BX681417 EMBL:BX571812
IPI:IPI00496826 RefSeq:NP_775384.1 UniGene:Dr.132970
ProteinModelPortal:Q1LVF0 SMR:Q1LVF0 STRING:Q1LVF0
Ensembl:ENSDART00000004277 GeneID:286832 KEGG:dre:286832 CTD:3915
HOVERGEN:HBG100808 InParanoid:Q8JHV8 KO:K05635 OMA:EATDYPW
OrthoDB:EOG49GKFS NextBio:20806483 ArrayExpress:Q1LVF0 Bgee:Q1LVF0
Uniprot:Q1LVF0
Length = 1593
Score = 544 (196.6 bits), Expect = 4.3e-51, P = 4.3e-51
Identities = 123/308 (39%), Positives = 164/308 (53%)
Query: 26 DPCY-ENGRPRRCIPDFVNAAFGQEVKVNSVCGLESPERYCDTSG------ACHVCDAGS 78
D C E+ RP+RC+P+FVNAAF V + CG PE +C +G +CH+C+A
Sbjct: 22 DECIDEDDRPQRCMPEFVNAAFNATVVATNTCG-SPPEEFCVQTGVTGVTKSCHICNAAD 80
Query: 79 PRGRFPAEYLTDLNNPSNVTCWRSEAQTSVNSLSASPDNVTLTLSLGKKFELTYISLSFC 138
PR A YLTD N P T W+S QT + + P+++ LTL LGK F++TY+ L F
Sbjct: 81 PRLHHGAVYLTDYNQPVQPTWWQS--QTMLAGIQY-PNSINLTLHLGKSFDITYVRLKF- 136
Query: 139 PKSIKPDSLAIYKSQDFGKSWQPLQFYSSQCKKLYGRTATGVISRG-NEQEALCTDRHKK 197
+ +P+S AIYK W P Q+YS C+K Y + G I G +EQ+ALCTD
Sbjct: 137 -HTSRPESFAIYKRSSEDGPWTPYQYYSGSCEKTYSKNNRGFIRTGEDEQQALCTDEFSD 195
Query: 198 ----QGGRCKCN---GHAS--RCIKSP--QGELVCECRHNTAGKDCEKCKPFFSDRPWGR 246
GG + G S SP Q + T + F+D +
Sbjct: 196 ISPLYGGNVAFSTLEGRPSAYNFDNSPVLQDWVTATDIRVTLNRLNTFGDEVFNDPKVLK 255
Query: 247 ATVYDANE-CKGGRCKCNGHASRCIKSPQGALVCECRHNTAGKDCEKCKPFFSDRPWGRA 305
+ Y ++ GGRCKCNGHAS C+K+ LVC C+HNT G DC CKPF++DRPW RA
Sbjct: 256 SYYYAISDFAVGGRCKCNGHASECVKNEYSKLVCNCKHNTEGADCNVCKPFYNDRPWRRA 315
Query: 306 TVYDANEC 313
T + NEC
Sbjct: 316 TAENPNEC 323
Score = 292 (107.8 bits), Expect = 3.0e-24, P = 3.0e-24
Identities = 51/102 (50%), Positives = 62/102 (60%)
Query: 199 GGRCKCNGHASRCIKSPQGELVCECRHNTAGKDCEKCKPFFSDRPWGRATVYDANECKGG 258
GGRCKCNGHAS C+K+ +LVC C+HNT G DC CKPF++DRPW RAT + NEC
Sbjct: 267 GGRCKCNGHASECVKNEYSKLVCNCKHNTEGADCNVCKPFYNDRPWRRATAENPNECLP- 325
Query: 259 RCKCNGHASRCIKSPQ-------GALVCECRHNTAGKDCEKC 293
C CNG ++ C P+ G C NT G CE+C
Sbjct: 326 -CNCNGKSAECYFDPELYRATGHGGHCRNCADNTDGPKCERC 366
Score = 188 (71.2 bits), Expect = 5.4e-12, Sum P(2) = 5.4e-12
Identities = 42/105 (40%), Positives = 55/105 (52%)
Query: 201 RCKCNGHASRCIKSPQGELVCECRHNTAGKDCEKCKPFFSDRPWGRATVYDANECKGGRC 260
RC CNGH+ C P+ + C C+HNTAG CE+CK F +G +TV +++CK C
Sbjct: 707 RCNCNGHSDTC--DPETGM-CNCQHNTAGLSCERCKDGF----YGDSTVGSSSDCKA--C 757
Query: 261 KCNGHASRCIKSPQGALVC-ECRHNTAGKDCEKCKP-FFSDRPWG 303
C A+ + +VC C T GK CE C FF D P G
Sbjct: 758 PCPAGATCAVVPKTNEVVCTNCPTGTTGKRCELCDDGFFGD-PLG 801
Score = 163 (62.4 bits), Expect = 5.2e-09, Sum P(2) = 5.2e-09
Identities = 48/157 (30%), Positives = 73/157 (46%)
Query: 159 WQPLQFYSSQCKKLYGRTATGVISRGNEQEALCTDRHKKQGGRCKCNGHASRCIKSPQGE 218
W+P ++ K LY T+ + + Q A D R + G +R ++
Sbjct: 619 WRPTIKHADFQKLLYNLTSIMIRGTYSAQSAGYLDNVSLVTAR-RGPGTPARWVEK---- 673
Query: 219 LVCECRHNTAGKDCEKC-KPFFSDRPWGRATVYDANECKGGRCKCNGHASRCIKSPQGAL 277
C C G+ CE+C + F RP R + C+ RC CNGH+ C P+ +
Sbjct: 674 --CTCPQGYLGQHCEQCDQGFRRSRPELRRF----STCE--RCNCNGHSDTC--DPETGM 723
Query: 278 VCECRHNTAGKDCEKCKPFFSDRPWGRATVYDANECK 314
C C+HNTAG CE+CK F +G +TV +++CK
Sbjct: 724 -CNCQHNTAGLSCERCKDGF----YGDSTVGSSSDCK 755
Score = 50 (22.7 bits), Expect = 5.4e-12, Sum P(2) = 5.4e-12
Identities = 16/54 (29%), Positives = 25/54 (46%)
Query: 28 CYEN-GRPR--RCIPDFVNAAFGQEVKVNSVCG-LESPERYCDTSGACHVCDAG 77
C +N P+ RC+ ++ A GQ ++ C + S CD +G C C G
Sbjct: 354 CADNTDGPKCERCLANYYREASGQRC-LSCGCNPVGSLSTQCDNTGRCS-CKPG 405
>UNIPROTKB|P11047 [details] [associations]
symbol:LAMC1 "Laminin subunit gamma-1" species:9606 "Homo
sapiens" [GO:0043208 "glycosphingolipid binding" evidence=IEA]
[GO:0005606 "laminin-1 complex" evidence=NAS;TAS] [GO:0005615
"extracellular space" evidence=NAS] [GO:0005604 "basement membrane"
evidence=IDA] [GO:0070062 "extracellular vesicular exosome"
evidence=IDA] [GO:0007492 "endoderm development" evidence=TAS]
[GO:0016477 "cell migration" evidence=IMP] [GO:0022617
"extracellular matrix disassembly" evidence=IMP] [GO:0006461
"protein complex assembly" evidence=IDA] [GO:0031581 "hemidesmosome
assembly" evidence=IMP] [GO:0005201 "extracellular matrix
structural constituent" evidence=IMP] [GO:0007155 "cell adhesion"
evidence=IDA] [GO:0050679 "positive regulation of epithelial cell
proliferation" evidence=TAS] [GO:0005576 "extracellular region"
evidence=TAS] [GO:0007411 "axon guidance" evidence=TAS] [GO:0031012
"extracellular matrix" evidence=ISS;IDA] [GO:0043260 "laminin-11
complex" evidence=TAS] [GO:0043259 "laminin-10 complex"
evidence=TAS] [GO:0034446 "substrate adhesion-dependent cell
spreading" evidence=IDA] Reactome:REACT_111045
Reactome:REACT_111102 GO:GO:0007411 GO:GO:0005615 GO:GO:0016477
GO:GO:0006461 GO:GO:0070062 InterPro:IPR013032 PROSITE:PS00022
PROSITE:PS01186 InterPro:IPR002049 Pfam:PF00053 SMART:SM00180
PROSITE:PS01248 PROSITE:PS50027 GO:GO:0034446
Pathway_Interaction_DB:smad2_3nuclearpathway GO:GO:0007492
DrugBank:DB00009 DrugBank:DB00029 DrugBank:DB00031 GO:GO:0050679
GO:GO:0031581 DrugBank:DB00015 GO:GO:0022617 GO:GO:0005201
GO:GO:0043208 InterPro:IPR018031 InterPro:IPR000034
InterPro:IPR008211 Pfam:PF00052 Pfam:PF00055 SMART:SM00281
SMART:SM00136 PROSITE:PS51115 PROSITE:PS51117 eggNOG:NOG235720
HOGENOM:HOG000019301 GO:GO:0005606 GO:GO:0043259 GO:GO:0043260
CleanEx:HS_LAMB2 CTD:3915 HOVERGEN:HBG100808 KO:K05635 OMA:EATDYPW
OrthoDB:EOG49GKFS EMBL:J03202 EMBL:M55210 EMBL:M55217 EMBL:M55201
EMBL:M55211 EMBL:M55212 EMBL:M55213 EMBL:M55214 EMBL:M55215
EMBL:M55216 EMBL:M55192 EMBL:M55193 EMBL:M55194 EMBL:M55195
EMBL:M55196 EMBL:M55197 EMBL:M55198 EMBL:M55199 EMBL:M55200
EMBL:M55202 EMBL:M55203 EMBL:M55204 EMBL:M55205 EMBL:M55206
EMBL:M55207 EMBL:M55208 EMBL:M55209 EMBL:AL354953 EMBL:AL450304
EMBL:X13939 EMBL:M27654 IPI:IPI00298281 PIR:S13548
RefSeq:NP_002284.3 UniGene:Hs.609663 ProteinModelPortal:P11047
SMR:P11047 IntAct:P11047 MINT:MINT-1184520 STRING:P11047
PhosphoSite:P11047 DMDM:224471885 PaxDb:P11047 PRIDE:P11047
Ensembl:ENST00000258341 GeneID:3915 KEGG:hsa:3915 UCSC:uc001gpy.4
GeneCards:GC01P182992 H-InvDB:HIX0001405 HGNC:HGNC:6492
HPA:CAB004486 HPA:HPA001908 HPA:HPA001909 MIM:150290
neXtProt:NX_P11047 PharmGKB:PA30280 InParanoid:P11047
PhylomeDB:P11047 ChiTaRS:LAMC1 GenomeRNAi:3915 NextBio:15381
Bgee:P11047 CleanEx:HS_LAMC1 Genevestigator:P11047
GermOnline:ENSG00000135862 Uniprot:P11047
Length = 1609
Score = 544 (196.6 bits), Expect = 4.3e-51, P = 4.3e-51
Identities = 126/308 (40%), Positives = 167/308 (54%)
Query: 26 DPCY-ENGRPRRCIPDFVNAAFGQEVKVNSVCGLESPERYCDTSG------ACHVCDAGS 78
D C E GRP+RC+P+FVNAAF V + CG PE YC +G +CH+CDAG
Sbjct: 38 DECTDEGGRPQRCMPEFVNAAFNVTVVATNTCGTP-PEEYCVQTGVTGVTKSCHLCDAGQ 96
Query: 79 PRGRFPAEYLTDLNNPSNVTCWRSEAQTSVNSLSASPDNVTLTLSLGKKFELTYISLSFC 138
P + A +LTD NN ++ T W+S QT + + P ++ LTL LGK F++TY+ L F
Sbjct: 97 PHLQHGAAFLTDYNNQADTTWWQS--QTMLAGVQY-PSSINLTLHLGKAFDITYVRLKF- 152
Query: 139 PKSIKPDSLAIYKSQDFGKSWQPLQFYSSQCKKLYGRTATGVI-SRGNEQEALCTDRHKK 197
+ +P+S AIYK W P Q+YS C+ Y + G I + G+EQ+ALCTD
Sbjct: 153 -HTSRPESFAIYKRTREDGPWIPYQYYSGSCENTYSKANRGFIRTGGDEQQALCTDEFSD 211
Query: 198 ----QGGRCKCN---GHAS--RCIKSP--QGELVCECRHNTAGKDCEKCKPFFSDRPWGR 246
GG + G S SP Q + T + F+D +
Sbjct: 212 ISPLTGGNVAFSTLEGRPSAYNFDNSPVLQEWVTATDIRVTLNRLNTFGDEVFNDPKVLK 271
Query: 247 ATVYDANE-CKGGRCKCNGHASRCIKSPQGALVCECRHNTAGKDCEKCKPFFSDRPWGRA 305
+ Y ++ GGRCKCNGHAS C+K+ LVC C+HNT G DCEKC PFF+DRPW RA
Sbjct: 272 SYYYAISDFAVGGRCKCNGHASECMKNEFDKLVCNCKHNTYGVDCEKCLPFFNDRPWRRA 331
Query: 306 TVYDANEC 313
T A+EC
Sbjct: 332 TAESASEC 339
Score = 299 (110.3 bits), Expect = 5.5e-25, P = 5.5e-25
Identities = 54/106 (50%), Positives = 65/106 (61%)
Query: 199 GGRCKCNGHASRCIKSPQGELVCECRHNTAGKDCEKCKPFFSDRPWGRATVYDANECKGG 258
GGRCKCNGHAS C+K+ +LVC C+HNT G DCEKC PFF+DRPW RAT A+EC
Sbjct: 283 GGRCKCNGHASECMKNEFDKLVCNCKHNTYGVDCEKCLPFFNDRPWRRATAESASECLP- 341
Query: 259 RCKCNGHASRCIKSPQ-------GALVCECRHNTAGKDCEKCKPFF 297
C CNG + C P+ G C+ NT G CE+C+ F
Sbjct: 342 -CDCNGRSQECYFDPELYRSTGHGGHCTNCQDNTDGAHCERCRENF 386
Score = 175 (66.7 bits), Expect = 2.8e-09, Sum P(2) = 2.8e-09
Identities = 42/105 (40%), Positives = 54/105 (51%)
Query: 202 CKCNGHASRCIKSPQGELVCECRHNTAGKDCEKCKPFFSDRPWGRATVYDANECKGGRCK 261
C CNGH+ C P+ VC CR NTAG CEKC SD +G +T +++C+ C
Sbjct: 724 CACNGHSETC--DPETG-VCNCRDNTAGPHCEKC----SDGYYGDSTAGTSSDCQP--CP 774
Query: 262 CNGHASRCIKSPQGALVC-ECRHNTAGKDCEKCKP-FFSDRPWGR 304
C G +S + +VC C T GK CE C +F D P GR
Sbjct: 775 CPGGSSCAVVPKTKEVVCTNCPTGTTGKRCELCDDGYFGD-PLGR 818
Score = 39 (18.8 bits), Expect = 2.8e-09, Sum P(2) = 2.8e-09
Identities = 15/48 (31%), Positives = 21/48 (43%)
Query: 16 VCGEKID-LNSDPC------YENGRPRRCIPDFVNAAFGQE-VKVNSV 55
VC + ++ N + C E+ PR C P F FG V N+V
Sbjct: 464 VCKDNVEGFNCERCKPGFFNLESSNPRGCTPCF---CFGHSSVCTNAV 508
>UNIPROTKB|F1S663 [details] [associations]
symbol:LAMC1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0043259 "laminin-10 complex" evidence=IEA] [GO:0043208
"glycosphingolipid binding" evidence=IEA] [GO:0034446 "substrate
adhesion-dependent cell spreading" evidence=IEA] [GO:0031581
"hemidesmosome assembly" evidence=IEA] [GO:0031175 "neuron
projection development" evidence=IEA] [GO:0022617 "extracellular
matrix disassembly" evidence=IEA] [GO:0016477 "cell migration"
evidence=IEA] [GO:0006461 "protein complex assembly" evidence=IEA]
[GO:0005201 "extracellular matrix structural constituent"
evidence=IEA] GO:GO:0016477 GO:GO:0006461 InterPro:IPR013032
PROSITE:PS00022 InterPro:IPR002049 Pfam:PF00053 SMART:SM00180
PROSITE:PS01248 PROSITE:PS50027 GO:GO:0034446 GO:GO:0031175
GO:GO:0031581 GO:GO:0022617 GO:GO:0005201 GO:GO:0043208
InterPro:IPR018031 InterPro:IPR000034 InterPro:IPR008211
Pfam:PF00052 Pfam:PF00055 SMART:SM00281 SMART:SM00136
PROSITE:PS51115 PROSITE:PS51117 GeneTree:ENSGT00690000102103
GO:GO:0043259 OMA:EATDYPW EMBL:CU914232 Ensembl:ENSSSCT00000016945
Uniprot:F1S663
Length = 1606
Score = 539 (194.8 bits), Expect = 1.5e-50, P = 1.5e-50
Identities = 125/308 (40%), Positives = 167/308 (54%)
Query: 26 DPCY-ENGRPRRCIPDFVNAAFGQEVKVNSVCGLESPERYCDTSG------ACHVCDAGS 78
D C E GR +RC+P+FVNAAF V + CG PE YC +G +CH+CDAG
Sbjct: 37 DECTDEGGRAQRCMPEFVNAAFNVTVVATNTCGTP-PEEYCVQTGVTGVTKSCHLCDAGQ 95
Query: 79 PRGRFPAEYLTDLNNPSNVTCWRSEAQTSVNSLSASPDNVTLTLSLGKKFELTYISLSFC 138
P + A +LTD NN ++ T W+S QT + + P+++ LTL LGK F++TY+ L F
Sbjct: 96 PHLQHGAAFLTDYNNQADTTWWQS--QTMLAGVQY-PNSINLTLHLGKAFDITYVRLKF- 151
Query: 139 PKSIKPDSLAIYKSQDFGKSWQPLQFYSSQCKKLYGRTATGVI-SRGNEQEALCTDRHKK 197
+ +P+S AIYK W P Q+YS C+ Y + G I + G+EQ+ALCTD
Sbjct: 152 -HTSRPESFAIYKRTREDGPWIPYQYYSGSCENTYSKANRGFIRTGGDEQQALCTDEFSD 210
Query: 198 ----QGGRCKCN---GHAS--RCIKSP--QGELVCECRHNTAGKDCEKCKPFFSDRPWGR 246
GG + G S SP Q + T + F+D +
Sbjct: 211 ISPLTGGNVAFSTLEGRPSAYNFDNSPVLQEWVTATDIRVTLNRLNTFGDEVFNDPKVLK 270
Query: 247 ATVYDANE-CKGGRCKCNGHASRCIKSPQGALVCECRHNTAGKDCEKCKPFFSDRPWGRA 305
+ Y ++ GGRCKCNGHAS C+K+ LVC C+HNT G DCEKC PFF+DRPW RA
Sbjct: 271 SYYYAISDFAVGGRCKCNGHASECVKNEFDKLVCNCKHNTYGVDCEKCLPFFNDRPWRRA 330
Query: 306 TVYDANEC 313
T A+EC
Sbjct: 331 TAESASEC 338
Score = 301 (111.0 bits), Expect = 3.4e-25, P = 3.4e-25
Identities = 53/103 (51%), Positives = 65/103 (63%)
Query: 199 GGRCKCNGHASRCIKSPQGELVCECRHNTAGKDCEKCKPFFSDRPWGRATVYDANECKGG 258
GGRCKCNGHAS C+K+ +LVC C+HNT G DCEKC PFF+DRPW RAT A+EC
Sbjct: 282 GGRCKCNGHASECVKNEFDKLVCNCKHNTYGVDCEKCLPFFNDRPWRRATAESASECLP- 340
Query: 259 RCKCNGHASRCIKSPQ-------GALVCECRHNTAGKDCEKCK 294
C CNG + C P+ G C+ NT G +CE+C+
Sbjct: 341 -CDCNGRSQECYFDPELYRSTGHGGHCTNCQDNTDGPNCERCR 382
Score = 179 (68.1 bits), Expect = 9.3e-10, Sum P(2) = 9.3e-10
Identities = 43/105 (40%), Positives = 55/105 (52%)
Query: 202 CKCNGHASRCIKSPQGELVCECRHNTAGKDCEKCKPFFSDRPWGRATVYDANECKGGRCK 261
C CNGH+ C P+ VC CR NTAG CEKC SD +G +TV +++C+ C
Sbjct: 723 CTCNGHSETC--DPETG-VCNCRDNTAGPHCEKC----SDGYYGDSTVGTSSDCQP--CP 773
Query: 262 CNGHASRCIKSPQGALVC-ECRHNTAGKDCEKCKP-FFSDRPWGR 304
C G +S + +VC C T GK CE C +F D P GR
Sbjct: 774 CPGGSSCAVVPKTQEVVCTNCPTGTTGKRCELCDDGYFGD-PLGR 817
Score = 129 (50.5 bits), Expect = 0.00050, Sum P(2) = 0.00050
Identities = 34/94 (36%), Positives = 45/94 (47%)
Query: 221 CECRHNTAGKDCEKCKPFFSDRPWGRATVYDANECKGGRCKCNGHASRCIKSPQGALVCE 280
C C G+ CE C + R Y + C C CNGH+ C P+ VC
Sbjct: 689 CTCPVGYGGQFCEMCLSGYR-RETPSLGPY--SPCV--LCTCNGHSETC--DPETG-VCN 740
Query: 281 CRHNTAGKDCEKCKPFFSDRPWGRATVYDANECK 314
CR NTAG CEKC SD +G +TV +++C+
Sbjct: 741 CRDNTAGPHCEKC----SDGYYGDSTVGTSSDCQ 770
Score = 39 (18.8 bits), Expect = 9.3e-10, Sum P(2) = 9.3e-10
Identities = 15/48 (31%), Positives = 21/48 (43%)
Query: 16 VCGEKID-LNSDPC------YENGRPRRCIPDFVNAAFGQEVKVNSVC 56
VC + ++ N + C E+ PR C P F FG +SVC
Sbjct: 463 VCKDNVEGFNCERCKPGFFNLESSNPRGCTPCF---CFGH----SSVC 503
>UNIPROTKB|F1NK49 [details] [associations]
symbol:LAMC1 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0005201 "extracellular matrix structural constituent"
evidence=IEA] [GO:0006461 "protein complex assembly" evidence=IEA]
[GO:0016477 "cell migration" evidence=IEA] [GO:0022617
"extracellular matrix disassembly" evidence=IEA] [GO:0031175
"neuron projection development" evidence=IEA] [GO:0031581
"hemidesmosome assembly" evidence=IEA] [GO:0034446 "substrate
adhesion-dependent cell spreading" evidence=IEA] [GO:0043208
"glycosphingolipid binding" evidence=IEA] [GO:0043259 "laminin-10
complex" evidence=IEA] GO:GO:0016477 GO:GO:0006461 GO:GO:0007155
InterPro:IPR002049 Pfam:PF00053 SMART:SM00180 PROSITE:PS01248
PROSITE:PS50027 GO:GO:0031581 GO:GO:0022617 GO:GO:0005201
GO:GO:0043208 InterPro:IPR018031 InterPro:IPR000034
InterPro:IPR008211 Pfam:PF00052 Pfam:PF00055 SMART:SM00281
SMART:SM00136 PROSITE:PS51115 PROSITE:PS51117
GeneTree:ENSGT00690000102103 GO:GO:0043259 OMA:EATDYPW
EMBL:AADN02034183 EMBL:AADN02034182 IPI:IPI00596936
Ensembl:ENSGALT00000007355 ArrayExpress:F1NK49 Uniprot:F1NK49
Length = 1608
Score = 535 (193.4 bits), Expect = 4.0e-50, P = 4.0e-50
Identities = 125/308 (40%), Positives = 166/308 (53%)
Query: 26 DPCYE--NGRPRRCIPDFVNAAFGQEVKVNSVCGLESPERYCDTSG-----ACHVCDAGS 78
D C E +GRP+RC+P+FVNAAF V N+ CG + E YC +G +CH+CDA
Sbjct: 38 DECTEERSGRPQRCMPEFVNAAFNTVVATNT-CGTPA-EEYCVQTGVTGVTSCHLCDASQ 95
Query: 79 PRGRFPAEYLTDLNNPSNVTCWRSEAQTSVNSLSASPDNVTLTLSLGKKFELTYISLSFC 138
P R A +LTD N ++ T W+S+ S+ + P V LTL LGK F++TY+ L F
Sbjct: 96 PHLRHGASFLTDYNRQADSTWWQSQ---SMLAGVQHPAAVNLTLHLGKAFDITYVRLKF- 151
Query: 139 PKSIKPDSLAIYKSQDFGKSWQPLQFYSSQCKKLYGRTATGVISRG-NEQEALCTDRHKK 197
+ +P+S AIYK W P Q+YS C+ Y + G I G +EQ+ALCTD
Sbjct: 152 -HTSRPESFAIYKRTREDGPWVPYQYYSGSCESTYNKVNRGFIRTGEDEQQALCTDEFSD 210
Query: 198 ----QGGRCKCNGHASR--CIKSPQGELVCECRHNTAGK-DCEKCKPF----FSDRPWGR 246
GG + R ++ E T + + F F+D +
Sbjct: 211 ISPLTGGNVAFSTLEGRPSAYNFDNSPVLQEWVTATDIRVSLNRLNTFGDEVFNDPKVLK 270
Query: 247 ATVYDANE-CKGGRCKCNGHASRCIKSPQGALVCECRHNTAGKDCEKCKPFFSDRPWGRA 305
+ Y ++ GGRCKCNGHAS CI++ G LVC C+HNT G DCEKC PFF+DRPW RA
Sbjct: 271 SYYYAISDFAVGGRCKCNGHASECIRNELGKLVCNCKHNTFGDDCEKCLPFFNDRPWRRA 330
Query: 306 TVYDANEC 313
T ANEC
Sbjct: 331 TAESANEC 338
Score = 316 (116.3 bits), Expect = 8.5e-27, P = 8.5e-27
Identities = 57/106 (53%), Positives = 66/106 (62%)
Query: 199 GGRCKCNGHASRCIKSPQGELVCECRHNTAGKDCEKCKPFFSDRPWGRATVYDANECKGG 258
GGRCKCNGHAS CI++ G+LVC C+HNT G DCEKC PFF+DRPW RAT ANEC
Sbjct: 282 GGRCKCNGHASECIRNELGKLVCNCKHNTFGDDCEKCLPFFNDRPWRRATAESANECLP- 340
Query: 259 RCKCNGHASRCIKSPQ-------GALVCECRHNTAGKDCEKCKPFF 297
C CNG + C P+ G CR NT G CE+C+ F
Sbjct: 341 -CDCNGRSQECYFDPELYRSTGHGGHCMGCRDNTDGAHCERCRDSF 385
Score = 175 (66.7 bits), Expect = 6.6e-10, P = 6.6e-10
Identities = 42/104 (40%), Positives = 54/104 (51%)
Query: 202 CKCNGHASRCIKSPQGELVCECRHNTAGKDCEKCKPFFSDRPWGRATVYDANECKGGRCK 261
C CNGH+ C P+ + C+CR NTAG CEKC SD +G AT A +C+ C
Sbjct: 723 CTCNGHSETC--DPETGM-CDCRDNTAGSHCEKC----SDGYYGDATAGTALDCQP--CP 773
Query: 262 CNGHASRCIKSPQGALVC-ECRHNTAGKDCEKCKP-FFSDRPWG 303
C G +S + +VC C+ T GK CE C +F D P G
Sbjct: 774 CPGGSSCAVVPRTKEVVCTSCQTGTTGKRCELCDDAYFGD-PLG 816
Score = 144 (55.7 bits), Expect = 2.0e-06, P = 2.0e-06
Identities = 35/94 (37%), Positives = 46/94 (48%)
Query: 221 CECRHNTAGKDCEKCKPFFSDRPWGRATVYDANECKGGRCKCNGHASRCIKSPQGALVCE 280
C C G+ CE+C P + G Y + C C CNGH+ C P+ + C+
Sbjct: 689 CSCPAGYEGQFCERCSPGYRRETPGLGP-Y--SPCVP--CTCNGHSETC--DPETGM-CD 740
Query: 281 CRHNTAGKDCEKCKPFFSDRPWGRATVYDANECK 314
CR NTAG CEKC SD +G AT A +C+
Sbjct: 741 CRDNTAGSHCEKC----SDGYYGDATAGTALDCQ 770
Score = 121 (47.7 bits), Expect = 0.00072, P = 0.00072
Identities = 33/108 (30%), Positives = 50/108 (46%)
Query: 202 CKCNGH-----ASRCIKSPQGELVCECRHNTAGKDCEKCKPFFSDRPWGRATVYDANECK 256
C+CN + C + GE + +C +NTAG C++CK F P AT A++C+
Sbjct: 827 CQCNDNIDPNAVGNCNRQT-GECL-KCIYNTAGFYCDRCKDGFFGNPL--AT-NPADKCR 881
Query: 257 GGRCKCNGHASRCIKSPQGALVCECRHNTAGKDCEKCKPFFSDRPWGR 304
C G ++ Q CEC + +DC C+P F + GR
Sbjct: 882 ACHCNPYGTVNQQTSCNQVTGQCECLSHVTERDCSACEPGFFNLQSGR 929
>RGD|1309399 [details] [associations]
symbol:Lamc3 "laminin gamma 3" species:10116 "Rattus norvegicus"
[GO:0000904 "cell morphogenesis involved in differentiation"
evidence=ISO] [GO:0005604 "basement membrane" evidence=ISO]
[GO:0007601 "visual perception" evidence=ISO] [GO:0014002
"astrocyte development" evidence=ISO] [GO:0060041 "retina
development in camera-type eye" evidence=ISO] RGD:1309399
GO:GO:0007601 GO:GO:0060041 InterPro:IPR002049 Pfam:PF00053
SMART:SM00180 PROSITE:PS01248 PROSITE:PS50027 GO:GO:0005604
GO:GO:0014002 GO:GO:0000904 InterPro:IPR000034 InterPro:IPR008211
Pfam:PF00052 Pfam:PF00055 SMART:SM00136 PROSITE:PS51115
PROSITE:PS51117 OrthoDB:EOG498TZW EMBL:AC105586 IPI:IPI00950417
Ensembl:ENSRNOT00000066978 UCSC:RGD:1309399 ArrayExpress:D3ZYW4
Uniprot:D3ZYW4
Length = 1580
Score = 529 (191.3 bits), Expect = 1.7e-49, P = 1.7e-49
Identities = 129/335 (38%), Positives = 173/335 (51%)
Query: 6 LLCVPL-LIGAVCGEKIDLNSDPCYEN-GRPRRCIPDFVNAAFGQEVKVNSVCGLESPER 63
++CV L ++ A C + S CY+ GR +RC+P+F NAAFG+ + + CG + PE
Sbjct: 13 VVCVALVMLKAHCATGAGMGS--CYDGAGRAQRCLPEFENAAFGRRAEASHTCG-QPPED 69
Query: 64 YCDTSGA------CHVCDAGSPRGRFPAEYLTDLNNPSNVTCWRSEAQTSVNSLSASPDN 117
+C GA C CD PR R A YLTD ++P + T W+S + P +
Sbjct: 70 FCPHVGAPGAGPQCQRCDDADPRRRHDASYLTDFHSPDDSTWWQSPSMAFGVQY---PTS 126
Query: 118 VTLTLSLGKKFELTYISLSFCPKSIKPDSLAIYKSQDFGKSWQPLQFYSSQCKKLYGRTA 177
V LTL LGK +E+TY+ L F + +P+S AIYK G W+P Q+YS+ C+K YG
Sbjct: 127 VNLTLHLGKAYEITYVRLKF--HTSRPESFAIYKRTHTGGPWEPYQYYSASCQKTYGHPE 184
Query: 178 TGVISRG-NEQEALCT----DRHKKQGGRCKCN---GHAS--RCIKSPQGE--------L 219
+ G +E+ A CT D GG + G S +SP + L
Sbjct: 185 GHYLRPGEDERVAFCTSEFSDISPLNGGNVAFSTLEGRPSAYNFEESPVLQEWVTSTDLL 244
Query: 220 VCECRHNTAGKDCEKCKPFFSDRPWGRATVYDANECK-GGRCKCNGHASRCIKSPQGALV 278
+ R NT G D F D ++ Y ++ GGRCKCNGHAS C + G L
Sbjct: 245 ISLDRLNTFGDD------IFKDPRVLQSYYYAVSDFSVGGRCKCNGHASACGPNEAGQLA 298
Query: 279 CECRHNTAGKDCEKCKPFFSDRPWGRATVYDANEC 313
C C+HNT G DCE+C PFF DRPW R T DANEC
Sbjct: 299 CHCQHNTTGVDCERCLPFFQDRPWARGTAEDANEC 333
Score = 293 (108.2 bits), Expect = 2.3e-24, P = 2.3e-24
Identities = 52/103 (50%), Positives = 61/103 (59%)
Query: 199 GGRCKCNGHASRCIKSPQGELVCECRHNTAGKDCEKCKPFFSDRPWGRATVYDANECKGG 258
GGRCKCNGHAS C + G+L C C+HNT G DCE+C PFF DRPW R T DANEC
Sbjct: 277 GGRCKCNGHASACGPNEAGQLACHCQHNTTGVDCERCLPFFQDRPWARGTAEDANECLP- 335
Query: 259 RCKCNGHASRCI-------KSPQGALVCECRHNTAGKDCEKCK 294
C C+GH+ C + G CR +TAG CE C+
Sbjct: 336 -CNCSGHSEECTFDRELYRSTGHGGHCQRCRDHTAGPHCEHCE 377
Score = 141 (54.7 bits), Expect = 4.3e-06, P = 4.3e-06
Identities = 38/105 (36%), Positives = 50/105 (47%)
Query: 202 CKCNGHASRCIKSPQGELVCECRHNTAGKDCEKCKPFFSDRPWGRATVYDANECKGGRCK 261
C CN H + C P +C C H+T G CE+C P F +G A A++C+ C
Sbjct: 719 CTCNQHGT-C--DPNTG-ICLCGHHTEGPSCERCMPGF----YGNAFSGHADDCQP--CP 768
Query: 262 CNGHASRCIKSPQGA-LVC-ECRHNTAGKDCEKCKP-FFSDRPWG 303
C G S C P+ +VC C G+ CE C+ FF D P G
Sbjct: 769 CPGQ-SACTTIPESRDVVCTHCPPGQRGRRCESCEDGFFGD-PLG 811
Score = 123 (48.4 bits), Expect = 0.00042, P = 0.00042
Identities = 32/102 (31%), Positives = 45/102 (44%)
Query: 204 CNGHASRCIKSPQGELVCECRHNTAGKDCEKCKPFFSDRPWGRA-TVYDANECKGGRCKC 262
C+ H+ RC++ C HNT G CE C+ F +G A A++C C
Sbjct: 836 CDPHSGRCLR---------CLHNTTGAHCEHCQEGF----YGSALATRPADKCAPCSCDP 882
Query: 263 NGHASRCIKSPQGALVCECRHNTAGKDCEKCKPFFSDRPWGR 304
G +S+ +P C C G+DC +C P F D GR
Sbjct: 883 RGSSSQKTCNPATGQ-CACLPYVTGRDCSRCSPGFYDLQPGR 923
>MGI|MGI:1341188 [details] [associations]
symbol:Ntn3 "netrin 3" species:10090 "Mus musculus"
[GO:0005102 "receptor binding" evidence=IDA;IPI] [GO:0005576
"extracellular region" evidence=IDA] [GO:0005578 "proteinaceous
extracellular matrix" evidence=IEA] [GO:0005794 "Golgi apparatus"
evidence=IDA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=ISA] [GO:0007409 "axonogenesis"
evidence=TAS] [GO:0007520 "myoblast fusion" evidence=ISA]
InterPro:IPR001134 PROSITE:PS50189 MGI:MGI:1341188 GO:GO:0005794
GO:GO:0005576 GO:GO:0006355 GO:GO:0005578 GO:GO:0005102
InterPro:IPR013032 PROSITE:PS00022 Reactome:REACT_127416
GO:GO:0007409 PROSITE:PS01186 GO:GO:0007520 InterPro:IPR002049
InterPro:IPR008993 Pfam:PF00053 SMART:SM00180 SUPFAM:SSF50242
PROSITE:PS01248 PROSITE:PS50027 InterPro:IPR018933 Pfam:PF01759
SMART:SM00643 InterPro:IPR008211 Pfam:PF00055 SMART:SM00136
PROSITE:PS51117 HOVERGEN:HBG006464 eggNOG:NOG244580
HOGENOM:HOG000286017 OrthoDB:EOG4VHK67 CTD:4917 KO:K06844
OMA:TASPLCW EMBL:AF152418 EMBL:AK031199 EMBL:AF149094 EMBL:AF128866
IPI:IPI00471207 RefSeq:NP_035077.1 UniGene:Mm.259542
ProteinModelPortal:Q9R1A3 SMR:Q9R1A3 STRING:Q9R1A3
PhosphoSite:Q9R1A3 PRIDE:Q9R1A3 Ensembl:ENSMUST00000024931
GeneID:18209 KEGG:mmu:18209 GeneTree:ENSGT00700000104042
InParanoid:Q9R1A3 NextBio:293594 Bgee:Q9R1A3 Genevestigator:Q9R1A3
GermOnline:ENSMUSG00000036473 Uniprot:Q9R1A3
Length = 580
Score = 435 (158.2 bits), Expect = 5.9e-41, P = 5.9e-41
Identities = 115/278 (41%), Positives = 145/278 (52%)
Query: 52 VNSVCGLES-PERYCDTSGACHVCDAGSPRGRFPAEYLTDLNNPSNVTCWRSEAQTSVNS 110
VN+ G E C S A VCD+ P+ A+ LT ++ CWRS+
Sbjct: 45 VNAALGREVLASSTCGRS-ANRVCDSSDPQRAHSADLLTSAPGTASPLCWRSDL------ 97
Query: 111 LSASPDNVTLTLSLGKKFELTYISLSFCPKSIKPDSLAIYKSQDFGKSWQPLQFYSSQCK 170
L +P NVTLT+ LGK FEL ++SL FC S P S+A+ KSQD G+SW PL F+SS C
Sbjct: 98 LQQAPFNVTLTVPLGKAFELVFVSLRFC--SAPPTSVALLKSQDHGRSWVPLGFFSSSCT 155
Query: 171 KLYGRT-ATGVISRGNEQEALCTDRHKKQ--GGRCKCNGHASRCIK--SPQG-EL----V 220
YGR A G EALC + Q GG G + ++ SPQG +L V
Sbjct: 156 LDYGRLPAPADGPSGPGPEALCFPAPQAQPDGG-----GLLAFSVQDGSPQGLDLDNSPV 210
Query: 221 CECRHNTAGKDCEKCKPFFS-DRPWGRATV---YDANECK-GGRCKCNGHASRCIKSPQG 275
+ +P D G TV Y A E + GGRCKCNGHASRC+ G
Sbjct: 211 LQDWVTATDIRIVLTRPAIQGDTRDGGVTVPYSYSATELQVGGRCKCNGHASRCLLDTHG 270
Query: 276 ALVCECRHNTAGKDCEKCKPFFSDRPWGRATVYDANEC 313
LVC+C+H T G DC +CKPF+ DRPW RAT +A+ C
Sbjct: 271 HLVCDCQHGTEGPDCSRCKPFYCDRPWQRATGQEAHAC 308
Score = 323 (118.8 bits), Expect = 2.5e-49, Sum P(2) = 2.5e-49
Identities = 61/125 (48%), Positives = 74/125 (59%)
Query: 199 GGRCKCNGHASRCIKSPQGELVCECRHNTAGKDCEKCKPFFSDRPWGRATVYDANECKGG 258
GGRCKCNGHASRC+ G LVC+C+H T G DC +CKPF+ DRPW RAT +A+ C
Sbjct: 252 GGRCKCNGHASRCLLDTHGHLVCDCQHGTEGPDCSRCKPFYCDRPWQRATGQEAHACLA- 310
Query: 259 RCKCNGHASRC--------IKSPQGALVC-ECRHNTAGKDCEKCKPFFSDRPWGRATVYD 309
C CNGHA RC + + VC CRHNTAG+ C C+ F P GR + D
Sbjct: 311 -CSCNGHARRCRFNMELYRLSGRRSGGVCLNCRHNTAGRHCHYCREGFYRDP-GRV-LSD 367
Query: 310 ANECK 314
C+
Sbjct: 368 RRACR 372
Score = 220 (82.5 bits), Expect = 2.5e-49, Sum P(2) = 2.5e-49
Identities = 53/134 (39%), Positives = 70/134 (52%)
Query: 6 LLCVPLLIGAVCGEKIDLNSDPCYENGR-PRRCIPDFVNAAFGQEVKVNSVCGLESPERY 64
LL + A + ++DPCY+ R PR CIP VNAA G+EV +S CG S R
Sbjct: 8 LLLTAGTLSAALSPGLPASADPCYDEAREPRSCIPGLVNAALGREVLASSTCG-RSANR- 65
Query: 65 CDTSGACHVCDAGSPRGRFPAEYLTDLNNPSNVTCWRSEAQTSVNSLSASPDNVTLTLSL 124
VCD+ P+ A+ LT ++ CWRS+ L +P NVTLT+ L
Sbjct: 66 --------VCDSSDPQRAHSADLLTSAPGTASPLCWRSDL------LQQAPFNVTLTVPL 111
Query: 125 GKKFELTYISLSFC 138
GK FEL ++SL FC
Sbjct: 112 GKAFELVFVSLRFC 125
Score = 150 (57.9 bits), Expect = 3.0e-28, Sum P(2) = 3.0e-28
Identities = 36/105 (34%), Positives = 45/105 (42%)
Query: 202 CKCNGHASRC--------IKSPQGELVC-ECRHNTAGKDCEKCKPFFSDRPWGRATVYDA 252
C CNGHA RC + + VC CRHNTAG+ C C+ F P GR + D
Sbjct: 311 CSCNGHARRCRFNMELYRLSGRRSGGVCLNCRHNTAGRHCHYCREGFYRDP-GRV-LSDR 368
Query: 253 NECKGGRCKCNGHASRCIKSPQGALVCECRHNTAGKDCEKCKPFF 297
C+ C G A + G C C+ G C +C P F
Sbjct: 369 RACRACDCHPVGAAGKTCNQTTGQ--CPCKDGVTGLTCNRCAPGF 411
Score = 60 (26.2 bits), Expect = 7.5e-19, Sum P(2) = 7.5e-19
Identities = 29/120 (24%), Positives = 42/120 (35%)
Query: 184 GNEQEALCTD-RHKKQGGRCK-CN-GH---ASRCIKSPQGELVCECRH-NTAGKDCEKCK 236
G +C + RH G C C G R + + C+C AGK C +
Sbjct: 331 GRRSGGVCLNCRHNTAGRHCHYCREGFYRDPGRVLSDRRACRACDCHPVGAAGKTCNQTT 390
Query: 237 PFFSDRPWGRATVYDANECKGGRCKCNGHASRCIKSPQGALVCECRHNTAGKDCEK-CKP 295
+ G T N C G + + C+K+P E +DCE C+P
Sbjct: 391 GQCPCKD-G-VTGLTCNRCAPGFQQSRSPVAPCVKTPVPGPTEESSP-VEPQDCESHCRP 447
>RGD|619811 [details] [associations]
symbol:Ntn3 "netrin 3" species:10116 "Rattus norvegicus"
[GO:0005102 "receptor binding" evidence=ISO] [GO:0005576
"extracellular region" evidence=ISO] [GO:0005794 "Golgi apparatus"
evidence=ISO] [GO:0007411 "axon guidance" evidence=NAS] RGD:619811
GO:GO:0007411 InterPro:IPR013032 PROSITE:PS00022 InterPro:IPR002049
Pfam:PF00053 SMART:SM00180 PROSITE:PS01248 InterPro:IPR008211
Pfam:PF00055 SMART:SM00136 PROSITE:PS51117 HOVERGEN:HBG006464
eggNOG:NOG244580 HOGENOM:HOG000286017 OrthoDB:EOG4VHK67
UniGene:Rn.95949 EMBL:AY028418 IPI:IPI00193993 UCSC:RGD:619811
InParanoid:Q924Z8 Genevestigator:Q924Z8 Uniprot:Q924Z8
Length = 333
Score = 511 (184.9 bits), Expect = 5.2e-49, P = 5.2e-49
Identities = 130/323 (40%), Positives = 163/323 (50%)
Query: 6 LLCVPLLIGAVCGEKIDLNSDPCYENGR-PRRCIPDFVNAAFGQEVKVNSVCGLESPERY 64
LL + A + ++DPCY+ R PR C P VNAA G EV +S CG S
Sbjct: 8 LLLTAGTLSAALSPGLPASADPCYDEAREPRCCTPGLVNAALGLEVLASSTCGRPSN--- 64
Query: 65 CDTSGACHVCDAGSPRGRFPAEYLTDLNNPSNVTCWRSEAQTSVNSLSASPDNVTLTLSL 124
HVCD P+ A+ LT ++ CWRS+ L +P NVTLT+ L
Sbjct: 65 -------HVCDPSDPQRAHSADLLTSAPGTASPLCWRSDV------LQRAPFNVTLTVPL 111
Query: 125 GKKFELTYISLSFCPKSIKPDSLAIYKSQDFGKSWQPLQFYSSQCKKLYGRT-ATGVISR 183
GK FEL ++SL FC S P S+A+ KSQD G+SW PL F+SS C YGR A
Sbjct: 112 GKAFELVFVSLRFC--SAPPTSVALLKSQDHGRSWVPLGFFSSSCSLDYGRLPAPADGPA 169
Query: 184 GNEQEALCTDRHKKQ---GGRCKCNGHASRCIKSPQG-EL----VCECRHNTAGKDCEKC 235
G EALC + Q GG + SPQG +L V +
Sbjct: 170 GPGPEALCFPAPQAQPDGGGLLAFSAQDG----SPQGLDLDNSPVLQDWVTATDIRIVLT 225
Query: 236 KPFFS-DRPWGRATV---YDANECK-GGRCKCNGHASRCIKSPQGALVCECRHNTAGKDC 290
+P D G TV Y A E + GGRCKCNGH+SRC+ G LVC+C+H T G DC
Sbjct: 226 RPAIQGDTRDGGVTVPYSYSATELQVGGRCKCNGHSSRCLMDTHGHLVCDCQHGTEGPDC 285
Query: 291 EKCKPFFSDRPWGRATVYDANEC 313
+CKPF+ DRPW RAT +A+ C
Sbjct: 286 SRCKPFYCDRPWQRATGQEAHAC 308
Score = 271 (100.5 bits), Expect = 1.4e-23, P = 1.4e-23
Identities = 43/71 (60%), Positives = 51/71 (71%)
Query: 199 GGRCKCNGHASRCIKSPQGELVCECRHNTAGKDCEKCKPFFSDRPWGRATVYDANECKGG 258
GGRCKCNGH+SRC+ G LVC+C+H T G DC +CKPF+ DRPW RAT +A+ C
Sbjct: 252 GGRCKCNGHSSRCLMDTHGHLVCDCQHGTEGPDCSRCKPFYCDRPWQRATGQEAHACLA- 310
Query: 259 RCKCNGHASRC 269
C CNGHA RC
Sbjct: 311 -CSCNGHARRC 320
>UNIPROTKB|G3V6X3 [details] [associations]
symbol:Ntn3 "Netrin 2-like (Chicken)" species:10116 "Rattus
norvegicus" [GO:0005102 "receptor binding" evidence=IEA]
[GO:0005576 "extracellular region" evidence=IEA] [GO:0005794 "Golgi
apparatus" evidence=IEA] InterPro:IPR001134 PROSITE:PS50189
RGD:619811 GO:GO:0005576 InterPro:IPR013032 PROSITE:PS00022
InterPro:IPR002049 InterPro:IPR008993 Pfam:PF00053 SMART:SM00180
SUPFAM:SSF50242 PROSITE:PS01248 PROSITE:PS50027 EMBL:CH473948
InterPro:IPR018933 Pfam:PF01759 SMART:SM00643 InterPro:IPR008211
Pfam:PF00055 SMART:SM00136 PROSITE:PS51117 CTD:4917 KO:K06844
OMA:TASPLCW GeneTree:ENSGT00700000104042 RefSeq:NP_446184.1
UniGene:Rn.95949 Ensembl:ENSRNOT00000009735 GeneID:114524
KEGG:rno:114524 NextBio:618679 Uniprot:G3V6X3
Length = 580
Score = 436 (158.5 bits), Expect = 4.6e-41, P = 4.6e-41
Identities = 113/277 (40%), Positives = 143/277 (51%)
Query: 52 VNSVCGLESPERYCDTSGACHVCDAGSPRGRFPAEYLTDLNNPSNVTCWRSEAQTSVNSL 111
VN+ G E A HVCD P+ A+ LT ++ CWRS+ L
Sbjct: 45 VNAALGREVLASSTCGRPANHVCDPSDPQRAHSADLLTSAPGTASPLCWRSDV------L 98
Query: 112 SASPDNVTLTLSLGKKFELTYISLSFCPKSIKPDSLAIYKSQDFGKSWQPLQFYSSQCKK 171
+P NVTLT+ LGK FEL ++SL FC S P S+A+ KSQD G+SW PL F+SS C
Sbjct: 99 QRAPFNVTLTVPLGKAFELVFVSLRFC--SAPPTSVALLKSQDHGRSWVPLGFFSSSCSL 156
Query: 172 LYGRT-ATGVISRGNEQEALCTDRHKKQ--GGRCKCNGHASRCIK--SPQG-EL----VC 221
YGR A G EALC + Q GG G + ++ SPQG +L V
Sbjct: 157 DYGRLPAPADGPAGPGPEALCFPAPQAQPDGG-----GLLAFSVQDGSPQGLDLDNSPVL 211
Query: 222 ECRHNTAGKDCEKCKPFFS-DRPWGRATV---YDANECK-GGRCKCNGHASRCIKSPQGA 276
+ +P D G TV Y A E + GGRCKCNGH+SRC+ G
Sbjct: 212 QDWVTATDIRIVLTRPAIQGDTRDGGVTVPYSYSATELQVGGRCKCNGHSSRCLMDTHGH 271
Query: 277 LVCECRHNTAGKDCEKCKPFFSDRPWGRATVYDANEC 313
LVC+C+H T G DC +CKPF+ DRPW RAT +A+ C
Sbjct: 272 LVCDCQHGTEGPDCSRCKPFYCDRPWQRATGQEAHAC 308
Score = 321 (118.1 bits), Expect = 5.3e-49, Sum P(2) = 5.3e-49
Identities = 60/125 (48%), Positives = 74/125 (59%)
Query: 199 GGRCKCNGHASRCIKSPQGELVCECRHNTAGKDCEKCKPFFSDRPWGRATVYDANECKGG 258
GGRCKCNGH+SRC+ G LVC+C+H T G DC +CKPF+ DRPW RAT +A+ C
Sbjct: 252 GGRCKCNGHSSRCLMDTHGHLVCDCQHGTEGPDCSRCKPFYCDRPWQRATGQEAHACLA- 310
Query: 259 RCKCNGHASRC--------IKSPQGALVC-ECRHNTAGKDCEKCKPFFSDRPWGRATVYD 309
C CNGHA RC + + VC CRHNTAG+ C C+ F P GR + D
Sbjct: 311 -CSCNGHARRCRFNMELYRLSGRRSGGVCLNCRHNTAGRHCHYCREGFYRDP-GRV-LSD 367
Query: 310 ANECK 314
C+
Sbjct: 368 RRACR 372
Score = 219 (82.2 bits), Expect = 5.3e-49, Sum P(2) = 5.3e-49
Identities = 53/134 (39%), Positives = 69/134 (51%)
Query: 6 LLCVPLLIGAVCGEKIDLNSDPCYENGR-PRRCIPDFVNAAFGQEVKVNSVCGLESPERY 64
LL + A + ++DPCY+ R PR C P VNAA G+EV +S CG P
Sbjct: 8 LLLTAGTLSAALSPGLPASADPCYDEAREPRCCTPGLVNAALGREVLASSTCG--RP--- 62
Query: 65 CDTSGACHVCDAGSPRGRFPAEYLTDLNNPSNVTCWRSEAQTSVNSLSASPDNVTLTLSL 124
A HVCD P+ A+ LT ++ CWRS+ L +P NVTLT+ L
Sbjct: 63 -----ANHVCDPSDPQRAHSADLLTSAPGTASPLCWRSDV------LQRAPFNVTLTVPL 111
Query: 125 GKKFELTYISLSFC 138
GK FEL ++SL FC
Sbjct: 112 GKAFELVFVSLRFC 125
Score = 150 (57.9 bits), Expect = 4.9e-28, Sum P(2) = 4.9e-28
Identities = 36/105 (34%), Positives = 45/105 (42%)
Query: 202 CKCNGHASRC--------IKSPQGELVC-ECRHNTAGKDCEKCKPFFSDRPWGRATVYDA 252
C CNGHA RC + + VC CRHNTAG+ C C+ F P GR + D
Sbjct: 311 CSCNGHARRCRFNMELYRLSGRRSGGVCLNCRHNTAGRHCHYCREGFYRDP-GRV-LSDR 368
Query: 253 NECKGGRCKCNGHASRCIKSPQGALVCECRHNTAGKDCEKCKPFF 297
C+ C G A + G C C+ G C +C P F
Sbjct: 369 RACRACDCHPVGAAGKTCNQTTGQ--CPCKDGVTGLTCNRCAPGF 411
Score = 60 (26.2 bits), Expect = 1.2e-18, Sum P(2) = 1.2e-18
Identities = 29/120 (24%), Positives = 42/120 (35%)
Query: 184 GNEQEALCTD-RHKKQGGRCK-CN-GH---ASRCIKSPQGELVCECRH-NTAGKDCEKCK 236
G +C + RH G C C G R + + C+C AGK C +
Sbjct: 331 GRRSGGVCLNCRHNTAGRHCHYCREGFYRDPGRVLSDRRACRACDCHPVGAAGKTCNQTT 390
Query: 237 PFFSDRPWGRATVYDANECKGGRCKCNGHASRCIKSPQGALVCECRHNTAGKDCEK-CKP 295
+ G T N C G + + C+K+P E +DCE C+P
Sbjct: 391 GQCPCKD-G-VTGLTCNRCAPGFQQSRSPVAPCVKTPVPGPTEESSP-VEPQDCESHCRP 447
>UNIPROTKB|F1NCH8 [details] [associations]
symbol:F1NCH8 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0000904 "cell morphogenesis involved in
differentiation" evidence=IEA] [GO:0005604 "basement membrane"
evidence=IEA] [GO:0007601 "visual perception" evidence=IEA]
[GO:0014002 "astrocyte development" evidence=IEA] [GO:0060041
"retina development in camera-type eye" evidence=IEA]
InterPro:IPR002049 Pfam:PF00053 SMART:SM00180 PROSITE:PS01248
PROSITE:PS50027 GO:GO:0005604 InterPro:IPR000034 InterPro:IPR008211
Pfam:PF00052 Pfam:PF00055 SMART:SM00136 PROSITE:PS51115
PROSITE:PS51117 GeneTree:ENSGT00690000102103 OMA:QRGRRCE
EMBL:AADN02026542 EMBL:AADN02026543 IPI:IPI00589777
Ensembl:ENSGALT00000006123 Uniprot:F1NCH8
Length = 1444
Score = 514 (186.0 bits), Expect = 5.6e-48, P = 5.6e-48
Identities = 125/315 (39%), Positives = 160/315 (50%)
Query: 25 SDPCYE-NGRPRRCIPDFVNAAFGQEVKVNSVCGLESPERYC------DTSGACHVCDAG 77
S PCY+ G+PRRC+P F NAAFG+ V++ CG PE YC D S C CDA
Sbjct: 22 SSPCYDPRGQPRRCMPVFENAAFGRVPLVSNTCG-SPPEDYCLQMGARDASQLCQRCDAA 80
Query: 78 SPRGRFPAEYLTDLNNPSNVTCWRSEAQTSVNSLSASPDNVTLTLSLGKKFELTYISLSF 137
P A +LTD ++ T W+S Q+ + P++V +TL LGK +E+TY+ L F
Sbjct: 81 DPLLHHNASFLTDFHSQEESTWWQS--QSMAFGIQ-HPNSVNITLHLGKSYEITYVRLKF 137
Query: 138 CPKSIKPDSLAIYKSQDFGKSWQPLQFYSSQCKKLYGRTATGVISRG-NEQEALCTDRHK 196
+ +P+S AIYK W P QFYS+ C+K Y + + G NEQ A CTD
Sbjct: 138 --HTSRPESFAIYKRSRADGPWVPFQFYSASCEKTYRKRQRQYLQPGENEQVAFCTDEFS 195
Query: 197 K----QGGRCKCN---GHAS--RCIKSPQGE--------LVCECRHNTAGKDCEKCKPFF 239
GG + G S SP + L+ R NT G D F
Sbjct: 196 DISPLSGGNVAFSTLEGRPSAYNFDGSPTLQEWVTVTDLLISLNRLNTFGDD------IF 249
Query: 240 SDRPWGRATVYDANECK-GGRCKCNGHASRCIKSPQGALVCECRHNTAGKDCEKCKPFFS 298
D ++ Y ++ GGRCKCNGHAS C G LVC C HNTAG DC+ C+PF+
Sbjct: 250 KDPKVLQSYYYAISDFSVGGRCKCNGHASECAPDEAGRLVCVCEHNTAGTDCQHCQPFYQ 309
Query: 299 DRPWGRATVYDANEC 313
DRPW R T ANEC
Sbjct: 310 DRPWARGTAEAANEC 324
Score = 288 (106.4 bits), Expect = 7.1e-24, P = 7.1e-24
Identities = 51/103 (49%), Positives = 61/103 (59%)
Query: 199 GGRCKCNGHASRCIKSPQGELVCECRHNTAGKDCEKCKPFFSDRPWGRATVYDANECKGG 258
GGRCKCNGHAS C G LVC C HNTAG DC+ C+PF+ DRPW R T ANEC
Sbjct: 268 GGRCKCNGHASECAPDEAGRLVCVCEHNTAGTDCQHCQPFYQDRPWARGTAEAANECLP- 326
Query: 259 RCKCNGHASRCI-------KSPQGALVCECRHNTAGKDCEKCK 294
C C+G + C ++ +G CR NTAG CE+C+
Sbjct: 327 -CDCSGRSEECFYDAELFRRTGRGGHCRNCRDNTAGPRCEQCR 368
Score = 149 (57.5 bits), Expect = 2.9e-06, Sum P(2) = 2.9e-06
Identities = 44/117 (37%), Positives = 53/117 (45%)
Query: 202 CKCNGHASRCIKSPQGELVCECRHNTAGKDCEKCKPFFSDRPWGRATVYDANECKGGRCK 261
C CN H C + G C C HNT G CE+C P F P+ T + ++CK C
Sbjct: 711 CTCNQHGD-C-EPLSGH--CRCLHNTEGPSCERCSPGFYGNPF---TGHP-DDCKP--CP 760
Query: 262 CNGHASRCIKSPQ-GALVC-ECRHNTAGKDCEKCKP-FFSDRPWG-RATVYDANECK 314
C G S C + P G +VC C GK CE C FF D P G R V C+
Sbjct: 761 CPGR-SPCTQLPSSGEVVCTHCPPGQRGKRCELCDDGFFGD-PLGQRGPVRPCVPCQ 815
Score = 134 (52.2 bits), Expect = 0.00014, Sum P(2) = 0.00014
Identities = 39/104 (37%), Positives = 48/104 (46%)
Query: 202 CKCNGHASRCIKSPQ-GELVC-ECRHNTAGKDCEKCKP-FFSDRPWG-RATVYDANECK- 256
C C G S C + P GE+VC C GK CE C FF D P G R V C+
Sbjct: 759 CPCPGR-SPCTQLPSSGEVVCTHCPPGQRGKRCELCDDGFFGD-PLGQRGPVRPCVPCQC 816
Query: 257 GGRCKCNGHASRCIKSPQGALVCECRHNTAGKDCEKCKP-FFSD 299
G N C S G + C HNT G+ C++C+P F+ D
Sbjct: 817 HGNVDLNA-VGNC-DSVSGRCL-RCLHNTTGEQCQQCRPGFYGD 857
Score = 38 (18.4 bits), Expect = 2.9e-06, Sum P(2) = 2.9e-06
Identities = 7/12 (58%), Positives = 8/12 (66%)
Query: 65 CDTSGACHVCDA 76
CD+SG C C A
Sbjct: 396 CDSSGTC-TCKA 406
>UNIPROTKB|F1S0X0 [details] [associations]
symbol:LAMC3 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0060041 "retina development in camera-type eye"
evidence=IEA] [GO:0014002 "astrocyte development" evidence=IEA]
[GO:0007601 "visual perception" evidence=IEA] [GO:0005604 "basement
membrane" evidence=IEA] [GO:0000904 "cell morphogenesis involved in
differentiation" evidence=IEA] GO:GO:0007601 InterPro:IPR013032
PROSITE:PS00022 GO:GO:0060041 InterPro:IPR002049 Pfam:PF00053
SMART:SM00180 PROSITE:PS01248 PROSITE:PS50027 GO:GO:0005604
GO:GO:0014002 GO:GO:0000904 InterPro:IPR000034 InterPro:IPR008211
Pfam:PF00052 Pfam:PF00055 SMART:SM00136 PROSITE:PS51115
PROSITE:PS51117 GeneTree:ENSGT00690000102103 OMA:QRGRRCE
EMBL:FP236754 EMBL:CU407178 Ensembl:ENSSSCT00000006279
Uniprot:F1S0X0
Length = 1583
Score = 507 (183.5 bits), Expect = 3.7e-47, P = 3.7e-47
Identities = 124/313 (39%), Positives = 159/313 (50%)
Query: 28 CYEN-GRPRRCIPDFVNAAFGQEVKVNSVCGLESPERYCDTSGA------CHVCDAGSPR 80
CY+ GRP+RC+P F NAAFG+ + + CG PE +C GA C CDA P
Sbjct: 31 CYDGAGRPQRCLPVFENAAFGRLAEASHTCG-HPPEDFCPHVGAQGAGAQCQRCDAADPE 89
Query: 81 GRFPAEYLTDLNNPSNVTCWRSEAQTSVNSLSASPDNVTLTLSLGKKFELTYISLSFCPK 140
A YLTD ++ + T W+S + P +V +TL LGK +E+TY+ L F
Sbjct: 90 RHHNASYLTDFHSQDDSTWWQSPSMAFGVQY---PTSVNITLRLGKAYEITYVRLKF--H 144
Query: 141 SIKPDSLAIYKSQDFGKSWQPLQFYSSQCKKLYGRTATGVISRGNEQE--ALCT----DR 194
+ +P+S AIYK G W+P Q+YS+ C+K YG+ A G R E E A CT D
Sbjct: 145 TSRPESFAIYKRSRAGGPWEPYQYYSASCRKTYGK-AEGQYLRPGEDERAAFCTSEFSDI 203
Query: 195 HKKQGGRCKCN---GHAS--RCIKSP-------QGELVCEC-RHNTAGKDCEKCKPFFSD 241
GG + G S +SP EL+ R NT G D F D
Sbjct: 204 SPLSGGNVAFSTLEGRPSAYNFEESPVLQEWVTSTELLISLDRLNTFGDD------IFKD 257
Query: 242 RPWGRATVYDANECK-GGRCKCNGHASRCIKSPQGALVCECRHNTAGKDCEKCKPFFSDR 300
++ Y ++ GGRCKCNGHAS C +G L C C+HNT G DCE+C PFF DR
Sbjct: 258 PKVLQSYYYAVSDFSVGGRCKCNGHASECGPDEEGQLACRCQHNTTGPDCERCLPFFQDR 317
Query: 301 PWGRATVYDANEC 313
PW R T ANEC
Sbjct: 318 PWARGTAEAANEC 330
Score = 304 (112.1 bits), Expect = 1.6e-25, P = 1.6e-25
Identities = 54/106 (50%), Positives = 63/106 (59%)
Query: 199 GGRCKCNGHASRCIKSPQGELVCECRHNTAGKDCEKCKPFFSDRPWGRATVYDANECKGG 258
GGRCKCNGHAS C +G+L C C+HNT G DCE+C PFF DRPW R T ANEC
Sbjct: 274 GGRCKCNGHASECGPDEEGQLACRCQHNTTGPDCERCLPFFQDRPWARGTAEAANECLP- 332
Query: 259 RCKCNGHASRCI-------KSPQGALVCECRHNTAGKDCEKCKPFF 297
C C+GH+ CI S G CR +TAG CE+C+ F
Sbjct: 333 -CNCSGHSEECIFDRELFRTSGHGGRCLHCRDHTAGPHCERCQENF 377
Score = 137 (53.3 bits), Expect = 7.9e-05, Sum P(2) = 7.9e-05
Identities = 38/105 (36%), Positives = 49/105 (46%)
Query: 202 CKCNGHASRCIKSPQGELVCECRHNTAGKDCEKCKPFFSDRPWGRATVYDANECKGGRCK 261
C CN H + C P +C C H+T G CE+C P F P+ A++C+ C
Sbjct: 714 CICNQHGT-C--DPNTG-ICLCGHHTEGPSCERCLPGFYGNPF----TGQADDCQP--CP 763
Query: 262 CNGHASRCIKSPQ-GALVC-ECRHNTAGKDCEKCKP-FFSDRPWG 303
C G S C P+ G +VC C G+ CE C FF D P G
Sbjct: 764 CPGQ-SACTTMPESGEVVCTHCPPGQRGQRCEICDDGFFGD-PLG 806
Score = 38 (18.4 bits), Expect = 7.9e-05, Sum P(2) = 7.9e-05
Identities = 8/22 (36%), Positives = 13/22 (59%)
Query: 65 CDTSGACHVCDAGSPRGRFPAE 86
C+++G+ CD S GR P +
Sbjct: 438 CNSAGSLGTCDPRS--GRCPCK 457
>UNIPROTKB|Q9Y6N6 [details] [associations]
symbol:LAMC3 "Laminin subunit gamma-3" species:9606 "Homo
sapiens" [GO:0007155 "cell adhesion" evidence=IEA] [GO:0000904
"cell morphogenesis involved in differentiation" evidence=IEA]
[GO:0007601 "visual perception" evidence=IEA] [GO:0014002
"astrocyte development" evidence=IEA] [GO:0060041 "retina
development in camera-type eye" evidence=IEA] [GO:0005604 "basement
membrane" evidence=IEA] [GO:0005578 "proteinaceous extracellular
matrix" evidence=TAS] [GO:0005198 "structural molecule activity"
evidence=TAS] [GO:0016020 "membrane" evidence=TAS] [GO:0005576
"extracellular region" evidence=TAS]
Pathway_Interaction_DB:a6b1_a6b4_integrin_pathway GO:GO:0016020
GO:GO:0005198 GO:GO:0007601 GO:GO:0005578 GO:GO:0007155
PROSITE:PS00022 GO:GO:0060041 PROSITE:PS01186 InterPro:IPR002049
Pfam:PF00053 SMART:SM00180 PROSITE:PS01248 PROSITE:PS50027
Pathway_Interaction_DB:amb2_neutrophils_pathway GO:GO:0005604
GO:GO:0014002 GO:GO:0000904 InterPro:IPR000034 InterPro:IPR008211
Pfam:PF00052 Pfam:PF00055 SMART:SM00136 PROSITE:PS51115
PROSITE:PS51117 eggNOG:NOG235720 HOGENOM:HOG000019301
HOVERGEN:HBG100808 EMBL:AF041835 EMBL:AL583807 EMBL:AL355872
EMBL:AB208887 IPI:IPI00914899 RefSeq:NP_006050.3 UniGene:Hs.201805
ProteinModelPortal:Q9Y6N6 SMR:Q9Y6N6 IntAct:Q9Y6N6
MINT:MINT-7034525 STRING:Q9Y6N6 DMDM:308153586 PaxDb:Q9Y6N6
PRIDE:Q9Y6N6 DNASU:10319 Ensembl:ENST00000361069 GeneID:10319
KEGG:hsa:10319 UCSC:uc004caa.1 CTD:10319 GeneCards:GC09P133884
H-InvDB:HIX0008477 HGNC:HGNC:6494 MIM:604349 MIM:614115
neXtProt:NX_Q9Y6N6 Orphanet:280640 PharmGKB:PA30282 KO:K06247
OrthoDB:EOG498TZW ChiTaRS:LAMC3 GenomeRNAi:10319 NextBio:39119
ArrayExpress:Q9Y6N6 Bgee:Q9Y6N6 CleanEx:HS_LAMC3
Genevestigator:Q9Y6N6 GermOnline:ENSG00000050555 Uniprot:Q9Y6N6
Length = 1575
Score = 493 (178.6 bits), Expect = 1.1e-45, P = 1.1e-45
Identities = 121/312 (38%), Positives = 157/312 (50%)
Query: 28 CYEN-GRPRRCIPDFVNAAFGQEVKVNSVCGLESPERYCDTSGA------CHVCDAGSPR 80
CY+ GRP+RC+P F NAAFG+ + + CG PE +C GA C CDA P+
Sbjct: 25 CYDGAGRPQRCLPVFENAAFGRLAQASHTCG-SPPEDFCPHVGAAGAGAHCQRCDAADPQ 83
Query: 81 GRFPAEYLTDLNNPSNVTCWRSEAQTSVNSLSASPDNVTLTLSLGKKFELTYISLSFCPK 140
A YLTD ++ T W+S + P +V +TL LGK +E+TY+ L F
Sbjct: 84 RHHNASYLTDFHSQDESTWWQSPSMAFGVQY---PTSVNITLRLGKAYEITYVRLKF--H 138
Query: 141 SIKPDSLAIYKSQDFGKSWQPLQFYSSQCKKLYGRTATGVISRG-NEQEALCT----DRH 195
+ +P+S AIYK W+P QFYS+ C+K YGR + G +E+ A CT D
Sbjct: 139 TSRPESFAIYKRSRADGPWEPYQFYSASCQKTYGRPEGQYLRPGEDERVAFCTSEFSDIS 198
Query: 196 KKQGGRCKCN---GHAS--RCIKSP-------QGELVCEC-RHNTAGKDCEKCKPFFSDR 242
GG + G S +SP EL+ R NT G D F D
Sbjct: 199 PLSGGNVAFSTLEGRPSAYNFEESPGLQEWVTSTELLISLDRLNTFGDD------IFKDP 252
Query: 243 PWGRATVYDANECK-GGRCKCNGHASRCIKSPQGALVCECRHNTAGKDCEKCKPFFSDRP 301
++ Y ++ GGRCKCNGHAS C G L C C+HNT G DCE+C PFF DRP
Sbjct: 253 KVLQSYYYAVSDFSVGGRCKCNGHASECGPDVAGQLACRCQHNTTGTDCERCLPFFQDRP 312
Query: 302 WGRATVYDANEC 313
W R T A+EC
Sbjct: 313 WARGTAEAAHEC 324
Score = 278 (102.9 bits), Expect = 9.2e-23, P = 9.2e-23
Identities = 50/106 (47%), Positives = 60/106 (56%)
Query: 199 GGRCKCNGHASRCIKSPQGELVCECRHNTAGKDCEKCKPFFSDRPWGRATVYDANECKGG 258
GGRCKCNGHAS C G+L C C+HNT G DCE+C PFF DRPW R T A+EC
Sbjct: 268 GGRCKCNGHASECGPDVAGQLACRCQHNTTGTDCERCLPFFQDRPWARGTAEAAHECLP- 326
Query: 259 RCKCNGHASRCI-------KSPQGALVCECRHNTAGKDCEKCKPFF 297
C C+G + C + G CR +TAG CE+C+ F
Sbjct: 327 -CNCSGRSEECTFDRELFRSTGHGGRCHHCRDHTAGPHCERCQENF 371
Score = 137 (53.3 bits), Expect = 9.9e-05, Sum P(2) = 9.9e-05
Identities = 37/105 (35%), Positives = 48/105 (45%)
Query: 202 CKCNGHASRCIKSPQGELVCECRHNTAGKDCEKCKPFFSDRPWGRATVYDANECKGGRCK 261
C CN H + C P +C C H+T G CE+C P F P+ A++C+ C
Sbjct: 707 CTCNQHGT-C--DPNTG-ICVCSHHTEGPSCERCLPGFYGNPFAG----QADDCQP--CP 756
Query: 262 CNGHASRCIKSPQGA-LVC-ECRHNTAGKDCEKCKP-FFSDRPWG 303
C G S C P+ +VC C G+ CE C FF D P G
Sbjct: 757 CPGQ-SACTTIPESREVVCTHCPPGQRGRRCEVCDDGFFGD-PLG 799
Score = 37 (18.1 bits), Expect = 9.9e-05, Sum P(2) = 9.9e-05
Identities = 8/22 (36%), Positives = 12/22 (54%)
Query: 65 CDTSGACHVCDAGSPRGRFPAE 86
C+ +G+ CD S GR P +
Sbjct: 432 CNPAGSLDTCDPRS--GRCPCK 451
>UNIPROTKB|Q96CW9 [details] [associations]
symbol:NTNG2 "Netrin-G2" species:9606 "Homo sapiens"
[GO:0046658 "anchored to plasma membrane" evidence=ISS] [GO:0007409
"axonogenesis" evidence=ISS] [GO:0003674 "molecular_function"
evidence=ND] InterPro:IPR000742 PROSITE:PS50026 SMART:SM00181
InterPro:IPR013032 PROSITE:PS00022 GO:GO:0007409 PROSITE:PS01186
InterPro:IPR002049 Pfam:PF00053 SMART:SM00180 PROSITE:PS01248
PROSITE:PS50027 GO:GO:0046658 InterPro:IPR013111 Pfam:PF07974
InterPro:IPR008211 Pfam:PF00055 SMART:SM00136 PROSITE:PS51117
PDB:3ZYI PDBsum:3ZYI eggNOG:NOG286598 HOVERGEN:HBG052676
EMBL:AB058760 EMBL:AY358165 EMBL:AL353631 EMBL:AL159997
EMBL:BC013770 IPI:IPI00432766 IPI:IPI00843936 RefSeq:NP_115925.2
UniGene:Hs.163642 PDB:3TBD PDB:3ZYG PDBsum:3TBD PDBsum:3ZYG
ProteinModelPortal:Q96CW9 SMR:Q96CW9 IntAct:Q96CW9 STRING:Q96CW9
PhosphoSite:Q96CW9 DMDM:34922606 PRIDE:Q96CW9
Ensembl:ENST00000372179 Ensembl:ENST00000393229 GeneID:84628
KEGG:hsa:84628 UCSC:uc004cbh.2 CTD:84628 GeneCards:GC09P135037
H-InvDB:HIX0008489 HGNC:HGNC:14288 neXtProt:NX_Q96CW9
PharmGKB:PA134962540 HOGENOM:HOG000231614 KO:K16359
OrthoDB:EOG47D9FR GenomeRNAi:84628 NextBio:74534
ArrayExpress:Q96CW9 Bgee:Q96CW9 CleanEx:HS_NTNG2
Genevestigator:Q96CW9 GermOnline:ENSG00000196358 Uniprot:Q96CW9
Length = 530
Score = 226 (84.6 bits), Expect = 5.0e-34, Sum P(2) = 5.0e-34
Identities = 52/126 (41%), Positives = 64/126 (50%)
Query: 200 GRCKCNGHASRCIKSPQGELVCECRHNTAGKDCEKCKPFFSDRPWGRATVY------DAN 253
GRCKCN HA+ C +G L CEC HNT G DC KCK F R W RA Y N
Sbjct: 285 GRCKCNLHANLC-SMREGSLQCECEHNTTGPDCGKCKKNFRTRSW-RAGSYLPLPHGSPN 342
Query: 254 ECK--G--GRCKCNGHASRCIKSP-QGALVC-ECRHNTAGKDCEKCKPFFSDRPWGRATV 307
C G G C+C GH++RC + C C+HNT G+ C+ C+ + G A +
Sbjct: 343 ACATAGSFGNCECYGHSNRCSYIDFLNVVTCVSCKHNTRGQHCQHCRLGYYRN--GSAEL 400
Query: 308 YDANEC 313
D N C
Sbjct: 401 DDENVC 406
Score = 191 (72.3 bits), Expect = 5.0e-34, Sum P(2) = 5.0e-34
Identities = 62/216 (28%), Positives = 95/216 (43%)
Query: 1 MHFLKLL--CVPLLIGA--VCGEKIDLNSDPCYENGRPRRCIPDFVNAAFGQEVKVNS-- 54
+H L L C+PL G +C + + P +E C P + +VKV
Sbjct: 2 LHLLALFLHCLPLASGDYDICKSWVTTDEGPTWEF---YACQPKVMRLKDYVKVKVEPSG 58
Query: 55 -VCGLESPERYCDTSGA--C-HVCDAGSPRGRFPAEYLTDLNNPSNVTCWRSEAQTSVNS 110
CG + PER+C C + CDA +P P + D T W+S S
Sbjct: 59 ITCG-DPPERFCSHENPYLCSNECDASNPDLAHPPRLMFDKEEEGLATYWQSITW----S 113
Query: 111 LSASPDNVTLTLSLGKKFELTY-ISLSFCPKSIKPDSLAIYKSQDFGKSWQPLQFYSSQC 169
SP +TLS K ELT + ++F + +P + + KS D G++WQP QFY+ C
Sbjct: 114 RYPSPLEANITLSWNKTVELTDDVVMTF--EYGRPTVMVLEKSLDNGRTWQPYQFYAEDC 171
Query: 170 KKLYGRTATGV--ISRGNEQEALCTDRHKKQGGRCK 203
+ +G +A +S + LCT+ + + G K
Sbjct: 172 MEAFGMSARRARDMSSSSAHRVLCTEEYSRWAGSKK 207
Score = 149 (57.5 bits), Expect = 4.9e-24, Sum P(2) = 4.9e-24
Identities = 37/101 (36%), Positives = 50/101 (49%)
Query: 200 GRCKCNGHASRCIKSPQGELV-C-ECRHNTAGKDCEKCKPFFSDRPWGRATVYDANECKG 257
G C+C GH++RC +V C C+HNT G+ C+ C+ + G A + D N C
Sbjct: 351 GNCECYGHSNRCSYIDFLNVVTCVSCKHNTRGQHCQHCRLGYYRN--GSAELDDENVCI- 407
Query: 258 GRCKCNGHAS---RCIKSPQGALVCECRHNTAGKDCEKCKP 295
C CN S RC ++ G CECR AG C+ C P
Sbjct: 408 -ECNCNQIGSVHDRCNET--G--FCECREGAAGPKCDDCLP 443
>UNIPROTKB|Q13751 [details] [associations]
symbol:LAMB3 "Laminin subunit beta-3" species:9606 "Homo
sapiens" [GO:0007155 "cell adhesion" evidence=IEA] [GO:0005610
"laminin-5 complex" evidence=IEA] [GO:0050873 "brown fat cell
differentiation" evidence=IEA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0005198 "structural molecule activity"
evidence=NAS] [GO:0008544 "epidermis development" evidence=TAS]
[GO:0005576 "extracellular region" evidence=TAS] [GO:0031581
"hemidesmosome assembly" evidence=TAS] [GO:0034329 "cell junction
assembly" evidence=TAS] Reactome:REACT_118779
Pathway_Interaction_DB:a6b1_a6b4_integrin_pathway
Reactome:REACT_111102 GO:GO:0005576 EMBL:CH471100 GO:GO:0005198
GO:GO:0050873 GO:GO:0007155 InterPro:IPR013032 PROSITE:PS00022
Reactome:REACT_111155 PROSITE:PS01186 InterPro:IPR002049
Pfam:PF00053 SMART:SM00180 PROSITE:PS01248 PROSITE:PS50027
Pathway_Interaction_DB:amb2_neutrophils_pathway GO:GO:0008544
GO:GO:0031581 MIM:226650 Orphanet:79402 EMBL:AL031316
InterPro:IPR008211 Pfam:PF00055 SMART:SM00136 PROSITE:PS51117
EMBL:AL023754 MIM:226700 Orphanet:79404 GO:GO:0005610 EMBL:L25541
EMBL:U17760 EMBL:U17745 EMBL:U17746 EMBL:U17747 EMBL:U17748
EMBL:U17749 EMBL:U17750 EMBL:U17751 EMBL:U17752 EMBL:U17753
EMBL:U17754 EMBL:U17755 EMBL:U17756 EMBL:U17757 EMBL:U17758
EMBL:U17759 EMBL:D37766 EMBL:AY035783 EMBL:BC075838 IPI:IPI00299404
PIR:A53612 RefSeq:NP_000219.2 RefSeq:NP_001017402.1
RefSeq:NP_001121113.1 UniGene:Hs.497636 ProteinModelPortal:Q13751
SMR:Q13751 MINT:MINT-4053402 STRING:Q13751 PhosphoSite:Q13751
DMDM:2497600 PaxDb:Q13751 PRIDE:Q13751 DNASU:3914
Ensembl:ENST00000356082 Ensembl:ENST00000367030
Ensembl:ENST00000391911 Ensembl:ENST00000455193 GeneID:3914
KEGG:hsa:3914 UCSC:uc001hhg.3 CTD:3914 GeneCards:GC01M209788
HGNC:HGNC:6490 HPA:HPA008069 MIM:150310 neXtProt:NX_Q13751
PharmGKB:PA30278 eggNOG:NOG289025 HOGENOM:HOG000113279
HOVERGEN:HBG052302 InParanoid:Q13751 KO:K06244 OMA:RSQMEED
OrthoDB:EOG4JDH5Z PhylomeDB:Q13751 ChiTaRS:LAMB3 GenomeRNAi:3914
NextBio:15375 PMAP-CutDB:Q13751 ArrayExpress:Q13751 Bgee:Q13751
CleanEx:HS_LAMB3 Genevestigator:Q13751 GermOnline:ENSG00000196878
Uniprot:Q13751
Length = 1172
Score = 256 (95.2 bits), Expect = 2.0e-33, Sum P(2) = 2.0e-33
Identities = 56/135 (41%), Positives = 75/135 (55%)
Query: 200 GRCKCNGHASRCIKSP----------QGELVCECRHNTAGKDCEKCKPFFSDRPWGRATV 249
G C C+GHA RC P Q VC C+HNTAG +CE+C PF+++RPW A
Sbjct: 248 GSCFCHGHADRCAPKPGASAGPSTAVQVHDVCVCQHNTAGPNCERCAPFYNNRPWRPAEG 307
Query: 250 YDANECKGGRCKCNGHASRCIKSP------QGAL--VCE-CRHNTAGKDCEKCK-PFFSD 299
DA+EC+ RC CNGH+ C P QGA VC+ CR +T GK+CE+C+ +F +
Sbjct: 308 QDAHECQ--RCDCNGHSETCHFDPAVFAASQGAYGGVCDNCRDHTEGKNCERCQLHYFRN 365
Query: 300 RPWGRATVYDANECK 314
R G + C+
Sbjct: 366 RRPGASIQETCISCE 380
Score = 150 (57.9 bits), Expect = 2.0e-33, Sum P(2) = 2.0e-33
Identities = 41/149 (27%), Positives = 67/149 (44%)
Query: 37 CIPDFVNAAFGQE--VKVNSVCGLESPERYCDTSGA----CHVCDAGSPRGRFPAEYLTD 90
C P + G+ ++ +S CGL PE YC G C CD+ P +
Sbjct: 26 CYPPVGDLLVGRTRFLRASSTCGLTKPETYCTQYGEWQMKCCKCDSRQPHNYYSHRVENV 85
Query: 91 LNNPSNVTCWRSEAQTSVNSLSASPDNVTLTLSLGKKFELTYISLSFCPKSIKPDSLAIY 150
++ + W+S Q VN P V+L L L ++F+L + + F + P + I
Sbjct: 86 ASSSGPMRWWQS--QNDVN-----P--VSLQLDLDRRFQLQEVMMEF--QGPMPAGMLIE 134
Query: 151 KSQDFGKSWQPLQFYSSQCKKLYGRTATG 179
+S DFGK+W+ Q+ ++ C + R G
Sbjct: 135 RSSDFGKTWRVYQYLAADCTSTFPRVRQG 163
Score = 143 (55.4 bits), Expect = 1.9e-17, Sum P(2) = 1.9e-17
Identities = 39/116 (33%), Positives = 57/116 (49%)
Query: 193 DRHKKQGGRCKCNGHASRCIKSP------QGEL--VCE-CRHNTAGKDCEKCK-PFFSDR 242
D H+ Q RC CNGH+ C P QG VC+ CR +T GK+CE+C+ +F +R
Sbjct: 309 DAHECQ--RCDCNGHSETCHFDPAVFAASQGAYGGVCDNCRDHTEGKNCERCQLHYFRNR 366
Query: 243 PWGRATVYDANECKGGRCKCNGHASRCIKSPQGALVCECRHNTAGKDCEKCKPFFS 298
G A++ + C C +G P C C+ + G+ C+ CKP F+
Sbjct: 367 RPG-ASIQET--CISCECDPDGAVPGAPCDPVTGQ-CVCKEHVQGERCDLCKPGFT 418
Score = 96 (38.9 bits), Expect = 1.4e-12, Sum P(2) = 1.4e-12
Identities = 23/77 (29%), Positives = 35/77 (45%)
Query: 221 CECRHNTAGKDCEKCKPFFSDRPWGRATVYDANECKGGRCKCNGHASRC-IKSPQGALVC 279
C C+ + G+ C+ CKP F+ T + C RC CN SR + + + C
Sbjct: 399 CVCKEHVQGERCDLCKPGFTG-----LTYANPQGCH--RCDCNILGSRRDMPCDEESGRC 451
Query: 280 ECRHNTAGKDCEKCKPF 296
C N G C++C P+
Sbjct: 452 LCLPNVVGPKCDQCAPY 468
Score = 75 (31.5 bits), Expect = 2.1e-10, Sum P(2) = 2.1e-10
Identities = 27/101 (26%), Positives = 37/101 (36%)
Query: 202 CKCNGHASRCIKSPQGELVCECRHNTAGKDCEKCK-PFFSDRPWGRATVYDANECKGGRC 260
C C+ H S + Q C CR G C DR +G A C+ C
Sbjct: 481 CACDPHNSLSPQCNQFTGQCPCREGFGGLMCSAAAIRQCPDRTYGDV----ATGCRACDC 536
Query: 261 KCNG-HASRCIKSPQGALVCECRHNTAGKDCEKCKPFFSDR 300
G C K+ G C CR G C++C+ + +R
Sbjct: 537 DFRGTEGPGCDKA-SGR--CLCRPGLTGPRCDQCQRGYCNR 574
>UNIPROTKB|F1PFM5 [details] [associations]
symbol:LAMB3 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0050873 "brown fat cell differentiation"
evidence=IEA] [GO:0005610 "laminin-5 complex" evidence=IEA]
GO:GO:0050873 InterPro:IPR013032 PROSITE:PS00022 InterPro:IPR002049
Pfam:PF00053 SMART:SM00180 PROSITE:PS01248 PROSITE:PS50027
InterPro:IPR008211 Pfam:PF00055 SMART:SM00136 PROSITE:PS51117
GO:GO:0005610 GeneTree:ENSGT00620000087753 OMA:RSQMEED
EMBL:AAEX03005067 EMBL:AAEX03005068 Ensembl:ENSCAFT00000018923
Uniprot:F1PFM5
Length = 1171
Score = 251 (93.4 bits), Expect = 2.6e-33, Sum P(2) = 2.6e-33
Identities = 53/121 (43%), Positives = 71/121 (58%)
Query: 200 GRCKCNGHASRCIKSP----------QGELVCECRHNTAGKDCEKCKPFFSDRPWGRATV 249
GRC C+GHA RC P Q VC C+HNTAG +CE+C PF++++PW A
Sbjct: 248 GRCLCHGHADRCAPQPGAPAGPSTTVQVHDVCVCQHNTAGPNCERCAPFYNNQPWRPADD 307
Query: 250 YDANECKGGRCKCNGHASRCIKSP------QGAL--VCE-CRHNTAGKDCEKCK-PFFSD 299
D +EC+ RC CNGH+ C P QGA VC+ CR +T GK+CE+C+ +F +
Sbjct: 308 QDPHECQ--RCDCNGHSETCHFDPAVFAASQGAHGGVCDNCRDHTEGKNCERCQLHYFRN 365
Query: 300 R 300
R
Sbjct: 366 R 366
Score = 161 (61.7 bits), Expect = 7.0e-20, Sum P(2) = 7.0e-20
Identities = 29/67 (43%), Positives = 39/67 (58%)
Query: 258 GRCKCNGHASRCIKSPQGAL----------VCECRHNTAGKDCEKCKPFFSDRPWGRATV 307
GRC C+GHA RC P VC C+HNTAG +CE+C PF++++PW A
Sbjct: 248 GRCLCHGHADRCAPQPGAPAGPSTTVQVHDVCVCQHNTAGPNCERCAPFYNNQPWRPADD 307
Query: 308 YDANECK 314
D +EC+
Sbjct: 308 QDPHECQ 314
Score = 154 (59.3 bits), Expect = 2.6e-33, Sum P(2) = 2.6e-33
Identities = 47/171 (27%), Positives = 77/171 (45%)
Query: 37 CIPDFVNAAFGQE--VKVNSVCGLESPERYCDTSGA----CHVCDAGSPRGRFPAEYLTD 90
C P + G+ ++ +S CGL PE YC G C CD+ P + + + +
Sbjct: 26 CYPPVGDLLIGRTRFLRASSTCGLTKPETYCTQYGEWQMKCCKCDSRLPHS-YNSHRVEN 84
Query: 91 LNNPSNVTCWRSEAQTSVNSLSASPDNVTLTLSLGKKFELTYISLSFCPKSIKPDSLAIY 150
+ + S W ++Q VN P V+L L L ++F+L I + F K P + I
Sbjct: 85 VVSSSGPMRWW-QSQNDVN-----P--VSLQLDLDRRFQLQDILMDF--KGPMPAGMLIE 134
Query: 151 KSQDFGKSWQPLQFYSSQCKKLYGRTATGVISRGNEQEALCTDRHKKQGGR 201
+S DFG +WQ Q+ ++ C + R G + Q+ C ++ GR
Sbjct: 135 RSSDFGNTWQVYQYLAADCASAFPRVRQG--QPQSWQDVRCQSLPQRPNGR 183
Score = 135 (52.6 bits), Expect = 4.4e-17, Sum P(2) = 4.4e-17
Identities = 39/116 (33%), Positives = 56/116 (48%)
Query: 193 DRHKKQGGRCKCNGHASRCIKSP------QGEL--VCE-CRHNTAGKDCEKCK-PFFSDR 242
D H+ Q RC CNGH+ C P QG VC+ CR +T GK+CE+C+ +F +R
Sbjct: 309 DPHECQ--RCDCNGHSETCHFDPAVFAASQGAHGGVCDNCRDHTEGKNCERCQLHYFRNR 366
Query: 243 PWGRATVYDANECKGGRCKCNGHASRCIKSPQGALVCECRHNTAGKDCEKCKPFFS 298
G A + + C C +G P C C+ + G+ C+ CKP F+
Sbjct: 367 RPG-APIQET--CIPCECDPDGAVPGVPCDPVTGQ-CVCKEHVQGERCDLCKPGFT 418
Score = 92 (37.4 bits), Expect = 1.3e-12, Sum P(2) = 1.3e-12
Identities = 22/77 (28%), Positives = 34/77 (44%)
Query: 221 CECRHNTAGKDCEKCKPFFSDRPWGRATVYDANECKGGRCKCNGHASRC-IKSPQGALVC 279
C C+ + G+ C+ CKP F+ T + C RC CN SR + + C
Sbjct: 399 CVCKEHVQGERCDLCKPGFTG-----LTYANPQGCH--RCDCNILGSRRDLPCDEETGQC 451
Query: 280 ECRHNTAGKDCEKCKPF 296
C + G C++C P+
Sbjct: 452 LCLPHVVGPKCDQCAPY 468
Score = 83 (34.3 bits), Expect = 1.1e-11, Sum P(2) = 1.1e-11
Identities = 32/117 (27%), Positives = 43/117 (36%)
Query: 191 CTDRH-KKQGGR----CKCNGHASRCIKSPQGELVCECRHNTAGKDCEKCK-PFFSDRPW 244
C H K GR C C+ H + + Q C CR G C DR +
Sbjct: 465 CAPYHWKLASGRGCEPCACDPHNALSPQCNQFTGQCPCREGFGGLTCNAAALRQCPDRTY 524
Query: 245 GRATVYDANECKGGRCKCNG-HASRCIKSPQGALVCECRHNTAGKDCEKCKPFFSDR 300
G A + C+ C G C K+ G C CR G C++C+ + DR
Sbjct: 525 GDA----GSGCRACDCDFRGTEGPGCDKA-SGR--CLCRPGLTGPRCDQCQRGYCDR 574
>MGI|MGI:1934028 [details] [associations]
symbol:Ntng1 "netrin G1" species:10090 "Mus musculus"
[GO:0005886 "plasma membrane" evidence=IDA] [GO:0007275
"multicellular organismal development" evidence=IEA] [GO:0007399
"nervous system development" evidence=IEA] [GO:0007409
"axonogenesis" evidence=IDA] [GO:0016020 "membrane" evidence=IEA]
[GO:0030154 "cell differentiation" evidence=IEA] [GO:0031225
"anchored to membrane" evidence=IEA] [GO:0046658 "anchored to
plasma membrane" evidence=IDA] InterPro:IPR000742 PROSITE:PS50026
SMART:SM00181 MGI:MGI:1934028 InterPro:IPR013032 PROSITE:PS00022
GO:GO:0007409 PROSITE:PS01186 InterPro:IPR002049 Pfam:PF00053
SMART:SM00180 PROSITE:PS01248 PROSITE:PS50027 GO:GO:0046658
InterPro:IPR008211 Pfam:PF00055 SMART:SM00136 PROSITE:PS51117
GeneTree:ENSGT00700000104042 CTD:22854 eggNOG:NOG286598
HOVERGEN:HBG052676 KO:K07522 EMBL:AB038662 EMBL:AB038663
EMBL:AB038664 EMBL:AB038665 EMBL:AB038666 EMBL:AB038667
EMBL:AF475069 EMBL:AF475070 EMBL:AF475071 EMBL:AF475072
EMBL:AF475073 EMBL:AF475074 EMBL:AF475075 EMBL:AF475076
EMBL:AF475077 EMBL:AF475078 EMBL:AK034465 EMBL:AK173075
EMBL:BC079881 IPI:IPI00323012 IPI:IPI00323015 IPI:IPI00323016
IPI:IPI00323017 IPI:IPI00354768 IPI:IPI00354771 IPI:IPI00354773
IPI:IPI00465860 IPI:IPI00469999 IPI:IPI00742371
RefSeq:NP_001156820.1 RefSeq:NP_001156821.1 RefSeq:NP_001156822.1
RefSeq:NP_001156823.1 RefSeq:NP_109624.1 RefSeq:NP_597995.1
UniGene:Mm.39262 ProteinModelPortal:Q8R4G0 SMR:Q8R4G0 STRING:Q8R4G0
PRIDE:Q8R4G0 Ensembl:ENSMUST00000072596 GeneID:80883 KEGG:mmu:80883
UCSC:uc008rai.2 UCSC:uc008raj.2 UCSC:uc008rak.2 UCSC:uc008ral.2
UCSC:uc008ram.2 UCSC:uc008rao.2 UCSC:uc008rap.1 UCSC:uc008raq.1
UCSC:uc008rar.2 InParanoid:Q8R4G0 NextBio:350195 Bgee:Q8R4G0
CleanEx:MM_NTNG1 Genevestigator:Q8R4G0
GermOnline:ENSMUSG00000059857 Uniprot:Q8R4G0
Length = 539
Score = 229 (85.7 bits), Expect = 3.6e-33, Sum P(2) = 3.6e-33
Identities = 50/130 (38%), Positives = 66/130 (50%)
Query: 197 KQGGRCKCNGHASRCIKSPQGELVCECRHNTAGKDCEKCKPFFSDRPWGRATVYD----- 251
K GRCKCN HA+ C+ +L CEC HNT G DC KCK + RPW +
Sbjct: 292 KVRGRCKCNLHATSCLYD-NSKLTCECEHNTTGPDCGKCKKNYQGRPWSPGSYLPIPKGT 350
Query: 252 ANEC-----KGGRCKCNGHASRCIKSPQ-GALVC-ECRHNTAGKDCEKCK-PFFSDRPWG 303
AN C G C+C GH++RC ++C C+HNT G+ CE C+ +F +
Sbjct: 351 ANTCIPSISSIGNCECFGHSNRCSYIDLLNTVICVSCKHNTRGQHCELCRLGYFRN---A 407
Query: 304 RATVYDANEC 313
A + D N C
Sbjct: 408 SAQLDDENVC 417
Score = 173 (66.0 bits), Expect = 3.6e-33, Sum P(2) = 3.6e-33
Identities = 49/168 (29%), Positives = 79/168 (47%)
Query: 37 CIPDFVNAAFGQEVKVNS---VCGLESPERYCDTSGA--CH-VCDAGSPRGRFPAEYLTD 90
C P+ + +VK++ CG + PE +C C+ CDA +P P E + D
Sbjct: 50 CQPESTDMTKYLKVKLDPPDITCG-DPPESFCAMGNPYMCNNECDASTPELAHPPELMFD 108
Query: 91 LNNPSNVTCWRSEAQTSVNSLSASPDNVTLTLSLGKKFELT-YISLSFCPKSIKPDSLAI 149
T W+S P V +TLS K ELT I ++F +S +PD + +
Sbjct: 109 FEGRHPSTFWQSATWKEY----PKPLQVNITLSWSKTIELTDNIVITF--ESGRPDQMIL 162
Query: 150 YKSQDFGKSWQPLQFYSSQCKKLYGRTATGV--ISRGNEQEALCTDRH 195
KS D+G++WQP Q+Y++ C + V +S+ E +CT+ +
Sbjct: 163 EKSLDYGRTWQPYQYYATDCLHAFHMDPKSVKDLSQHTVLEIICTEEY 210
Score = 151 (58.2 bits), Expect = 5.9e-22, Sum P(2) = 5.9e-22
Identities = 36/102 (35%), Positives = 51/102 (50%)
Query: 200 GRCKCNGHASRCIKSPQ-GELVC-ECRHNTAGKDCEKCK-PFFSDRPWGRATVYDANECK 256
G C+C GH++RC ++C C+HNT G+ CE C+ +F + A + D N C
Sbjct: 362 GNCECFGHSNRCSYIDLLNTVICVSCKHNTRGQHCELCRLGYFRN---ASAQLDDENVCI 418
Query: 257 GGRCKCNGHAS---RCIKSPQGALVCECRHNTAGKDCEKCKP 295
C CN S RC G+ CEC+ T G C++C P
Sbjct: 419 --ECYCNPLGSIHDRC----NGSGFCECKTGTTGPKCDECLP 454
>UNIPROTKB|F1NLU4 [details] [associations]
symbol:LAMB3 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0005610 "laminin-5 complex" evidence=IEA] [GO:0050873
"brown fat cell differentiation" evidence=IEA] GO:GO:0050873
InterPro:IPR002049 Pfam:PF00053 SMART:SM00180 PROSITE:PS01248
PROSITE:PS50027 InterPro:IPR008211 Pfam:PF00055 SMART:SM00136
PROSITE:PS51117 GO:GO:0005610 GeneTree:ENSGT00620000087753
OMA:RSQMEED EMBL:AADN02044975 IPI:IPI00592759
Ensembl:ENSGALT00000002051 Uniprot:F1NLU4
Length = 1165
Score = 240 (89.5 bits), Expect = 5.4e-33, Sum P(2) = 5.4e-33
Identities = 50/115 (43%), Positives = 64/115 (55%)
Query: 200 GRCKCNGHASRCIKS-----------PQGELVCECRHNTAGKDCEKCKPFFSDRPWGRAT 248
G C CNGHA RCI S PQ CEC+HNTAG +C C ++DRPW A
Sbjct: 245 GSCFCNGHADRCIPSRDPHAMDNCSLPQVHGRCECQHNTAGPNCGHCAALYNDRPWAPAE 304
Query: 249 VYDANECKGGRCKCNGHASRCIKSPQ-----GAL---VCE-CRHNTAGKDCEKCK 294
D +EC+ C CNGH++ C P+ G + VC+ C+HNT G +CE+CK
Sbjct: 305 DNDPHECQ--LCNCNGHSASCHFDPEVFHSSGGVSGGVCDDCQHNTEGNNCERCK 357
Score = 162 (62.1 bits), Expect = 5.4e-33, Sum P(2) = 5.4e-33
Identities = 42/137 (30%), Positives = 64/137 (46%)
Query: 47 GQEVKVNSVCGLESPERYCDTSGA----CHVCDAGSPRGRFPAEYLTDLNNPSNVTCWRS 102
GQ + +S CGL PE YC G C CD+ P R L++ W+S
Sbjct: 35 GQHLTASSTCGLTKPETYCTPHGEWNMRCCKCDSRLPHARNGHRVANMLSSAGRARWWQS 94
Query: 103 EAQTSVNSLSASPDNVTLTLSLGKKFELTYISLSFCPKSIKPDSLAIYKSQDFGKSWQPL 162
++ ++V L L L +KF+L+ I L F +S P ++ I +S DFGK+W+
Sbjct: 95 QS---------GMEHVYLQLDLDEKFQLSSIVLDF--RSPLPAAMLIERSTDFGKTWEVY 143
Query: 163 QFYSSQCKKLYGRTATG 179
Q+ +S C + G
Sbjct: 144 QYLASDCAAAFPHIPRG 160
Score = 152 (58.6 bits), Expect = 8.6e-20, Sum P(2) = 8.6e-20
Identities = 31/68 (45%), Positives = 37/68 (54%)
Query: 258 GRCKCNGHASRCIKS-----------PQGALVCECRHNTAGKDCEKCKPFFSDRPWGRAT 306
G C CNGHA RCI S PQ CEC+HNTAG +C C ++DRPW A
Sbjct: 245 GSCFCNGHADRCIPSRDPHAMDNCSLPQVHGRCECQHNTAGPNCGHCAALYNDRPWAPAE 304
Query: 307 VYDANECK 314
D +EC+
Sbjct: 305 DNDPHECQ 312
Score = 149 (57.5 bits), Expect = 1.8e-19, Sum P(2) = 1.8e-19
Identities = 37/116 (31%), Positives = 56/116 (48%)
Query: 193 DRHKKQGGRCKCNGHASRCIKSPQ-----GEL---VCE-CRHNTAGKDCEKCKP-FFSDR 242
D H+ Q C CNGH++ C P+ G + VC+ C+HNT G +CE+CK +F ++
Sbjct: 307 DPHECQ--LCNCNGHSASCHFDPEVFHSSGGVSGGVCDDCQHNTEGNNCERCKTNYFRNQ 364
Query: 243 PWGRATVYDANECKGGRCKCNGHASRCIKSPQGALVCECRHNTAGKDCEKCKPFFS 298
R + C+ C +G + P C C+ N G+ C CKP F+
Sbjct: 365 ---RQDLTHPEACQPCECDPDGTVPGSVCDPLSGH-CVCKENVQGERCHLCKPGFA 416
Score = 107 (42.7 bits), Expect = 4.1e-15, Sum P(2) = 4.1e-15
Identities = 34/115 (29%), Positives = 43/115 (37%)
Query: 201 RCKCNGHASRCIKSPQGEL-VCECRHNTAGKDCEKCKPFFSDRPWGRATVYDANECKGGR 259
RC CN +R E C C N G DC++C D GR C+
Sbjct: 428 RCACNVLGTRQNVPCDDETGSCSCLPNVVGTDCDQCAAGHWDMASGRG-------CRP-- 478
Query: 260 CKCNGHASRCIKSPQGALVCECRHNTAGKDCEKCKP-FFSDRPWGRATVYDANEC 313
C+CN S I Q C+CR G+ C + DR +G V EC
Sbjct: 479 CECNPSGSHSIHCNQFTGQCQCREGFTGRTCSAAQQQVCPDRHFGDVRV-GCTEC 532
Score = 93 (37.8 bits), Expect = 1.2e-13, Sum P(2) = 1.2e-13
Identities = 27/104 (25%), Positives = 40/104 (38%)
Query: 193 DRHKKQGGR-CKCNGHASRCIKSPQGELVCECRHNTAGKDCEKCKP-FFSDRPWGRATVY 250
D +G R C+CN S I Q C+CR G+ C + DR +G V
Sbjct: 469 DMASGRGCRPCECNPSGSHSIHCNQFTGQCQCREGFTGRTCSAAQQQVCPDRHFGDVRV- 527
Query: 251 DANECKGGRCKCNGHASRCIKSPQGALVCECRHNTAGKDCEKCK 294
C C C+ + + + C CR G C++C+
Sbjct: 528 ---GCT--ECNCDFQGTEDVGCDKSTGHCLCRPGVTGPRCDQCQ 566
Score = 68 (29.0 bits), Expect = 4.6e-11, Sum P(2) = 4.6e-11
Identities = 19/74 (25%), Positives = 33/74 (44%)
Query: 168 QCKKLY-GRTATGVISRGNEQEALCTDRH---KKQG-GRCKCNGHASRCIKSPQGELVCE 222
QC++ + GRT + Q+ +C DRH + G C C+ + + + C
Sbjct: 499 QCREGFTGRTCSAA------QQQVCPDRHFGDVRVGCTECNCDFQGTEDVGCDKSTGHCL 552
Query: 223 CRHNTAGKDCEKCK 236
CR G C++C+
Sbjct: 553 CRPGVTGPRCDQCQ 566
Score = 46 (21.3 bits), Expect = 8.5e-09, Sum P(2) = 8.5e-09
Identities = 15/54 (27%), Positives = 20/54 (37%)
Query: 188 EALCTDRHKKQGGRCKCNGHASRCIKSPQGELVCECR--HNTAGKDCEKCKPFF 239
E C + + G K GH C G +C+ H + CE C P F
Sbjct: 531 ECNCDFQGTEDVGCDKSTGHCL-CRPGVTGPRCDQCQRDHCSTYPSCEPCHPCF 583
Score = 42 (19.8 bits), Expect = 6.9e-07, Sum P(2) = 6.9e-07
Identities = 7/12 (58%), Positives = 8/12 (66%)
Query: 28 CYENGRPRRCIP 39
C+ NG RCIP
Sbjct: 247 CFCNGHADRCIP 258
>UNIPROTKB|F1PHK9 [details] [associations]
symbol:LAMC1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0043259 "laminin-10 complex" evidence=IEA]
[GO:0043208 "glycosphingolipid binding" evidence=IEA] [GO:0034446
"substrate adhesion-dependent cell spreading" evidence=IEA]
[GO:0031581 "hemidesmosome assembly" evidence=IEA] [GO:0031175
"neuron projection development" evidence=IEA] [GO:0022617
"extracellular matrix disassembly" evidence=IEA] [GO:0016477 "cell
migration" evidence=IEA] [GO:0006461 "protein complex assembly"
evidence=IEA] [GO:0005201 "extracellular matrix structural
constituent" evidence=IEA] GO:GO:0016477 GO:GO:0006461
InterPro:IPR013032 PROSITE:PS00022 InterPro:IPR002049 Pfam:PF00053
SMART:SM00180 PROSITE:PS01248 PROSITE:PS50027 GO:GO:0034446
GO:GO:0031175 GO:GO:0031581 GO:GO:0022617 GO:GO:0005201
GO:GO:0043208 InterPro:IPR018031 InterPro:IPR000034
InterPro:IPR008211 Pfam:PF00052 Pfam:PF00055 SMART:SM00281
SMART:SM00136 PROSITE:PS51115 PROSITE:PS51117
GeneTree:ENSGT00690000102103 GO:GO:0043259 OMA:EATDYPW
EMBL:AAEX03005149 EMBL:AAEX03005150 Ensembl:ENSCAFT00000020993
Uniprot:F1PHK9
Length = 1487
Score = 373 (136.4 bits), Expect = 6.5e-33, P = 6.5e-33
Identities = 86/212 (40%), Positives = 114/212 (53%)
Query: 115 PDNVTLTLSLGKKFELTYISLSFCPKSIKPDSLAIYKSQDFGKSWQPLQFYSSQCKKLYG 174
P+++ LTL LGK F++TY+ L F + +P+S AIYK G W P Q+YS C+ Y
Sbjct: 8 PNSINLTLHLGKAFDITYVRLKF--HTSRPESFAIYKRTREGGPWIPYQYYSGSCENTYS 65
Query: 175 RTATGVI-SRGNEQEALCTDRHKK----QGGRCKCN---GHAS--RCIKSP--QGELVCE 222
+ G I + G+EQ+ALCTD GG + G S SP Q +
Sbjct: 66 KANRGFIRTGGDEQQALCTDEFSDISPLTGGNVAFSTLEGRPSAYNFDNSPVLQEWVTAT 125
Query: 223 CRHNTAGKDCEKCKPFFSDRPWGRATVYDANE-CKGGRCKCNGHASRCIKSPQGALVCEC 281
T + F+D ++ Y ++ GGRCKCNGHAS C+K+ LVC C
Sbjct: 126 DIRVTLNRLNTFGDEVFNDPKVLKSYYYAISDFAVGGRCKCNGHASECVKNEFDKLVCNC 185
Query: 282 RHNTAGKDCEKCKPFFSDRPWGRATVYDANEC 313
+HNT G DCEKC PFF+DRPW RAT A+EC
Sbjct: 186 KHNTYGVDCEKCLPFFNDRPWRRATAESASEC 217
Score = 302 (111.4 bits), Expect = 2.4e-25, P = 2.4e-25
Identities = 54/106 (50%), Positives = 66/106 (62%)
Query: 199 GGRCKCNGHASRCIKSPQGELVCECRHNTAGKDCEKCKPFFSDRPWGRATVYDANECKGG 258
GGRCKCNGHAS C+K+ +LVC C+HNT G DCEKC PFF+DRPW RAT A+EC
Sbjct: 161 GGRCKCNGHASECVKNEFDKLVCNCKHNTYGVDCEKCLPFFNDRPWRRATAESASECLP- 219
Query: 259 RCKCNGHASRCIKSPQ-------GALVCECRHNTAGKDCEKCKPFF 297
C CNG + C P+ G C+ NT G +CE+C+ F
Sbjct: 220 -CDCNGRSQECYFDPELYRSTGHGGHCTNCQGNTDGANCERCRENF 264
Score = 178 (67.7 bits), Expect = 1.0e-09, Sum P(2) = 1.0e-09
Identities = 42/105 (40%), Positives = 55/105 (52%)
Query: 202 CKCNGHASRCIKSPQGELVCECRHNTAGKDCEKCKPFFSDRPWGRATVYDANECKGGRCK 261
C CNGH+ C P+ VC+CR NTAG CEKC SD +G +T +++C+ C
Sbjct: 602 CTCNGHSETC--DPETG-VCDCRDNTAGPHCEKC----SDGYYGDSTTGSSSDCQP--CP 652
Query: 262 CNGHASRCIKSPQGALVC-ECRHNTAGKDCEKCKP-FFSDRPWGR 304
C G +S + +VC C T GK CE C +F D P GR
Sbjct: 653 CPGGSSCAVVPKTQEVVCTNCPTGTTGKRCELCDDGYFGD-PLGR 696
Score = 128 (50.1 bits), Expect = 0.00055, Sum P(2) = 0.00055
Identities = 33/94 (35%), Positives = 45/94 (47%)
Query: 221 CECRHNTAGKDCEKCKPFFSDRPWGRATVYDANECKGGRCKCNGHASRCIKSPQGALVCE 280
C C G+ CE C + R Y + C C CNGH+ C P+ VC+
Sbjct: 568 CTCPVGYGGQFCEMCLSGYR-RETPSLGPY--SPCV--LCTCNGHSETC--DPETG-VCD 619
Query: 281 CRHNTAGKDCEKCKPFFSDRPWGRATVYDANECK 314
CR NTAG CEKC SD +G +T +++C+
Sbjct: 620 CRDNTAGPHCEKC----SDGYYGDSTTGSSSDCQ 649
Score = 39 (18.8 bits), Expect = 1.0e-09, Sum P(2) = 1.0e-09
Identities = 15/48 (31%), Positives = 21/48 (43%)
Query: 16 VCGEKID-LNSDPC------YENGRPRRCIPDFVNAAFGQE-VKVNSV 55
VC + ++ N + C E+ PR C P F FG V N+V
Sbjct: 342 VCKDNVEGFNCERCKPGFFNLESSNPRGCTPCF---CFGHSSVCTNAV 386
>UNIPROTKB|Q9Y2I2 [details] [associations]
symbol:NTNG1 "Netrin-G1" species:9606 "Homo sapiens"
[GO:0005515 "protein binding" evidence=IPI] [GO:0007409
"axonogenesis" evidence=ISS] [GO:0046658 "anchored to plasma
membrane" evidence=ISS] InterPro:IPR000742 PROSITE:PS50026
SMART:SM00181 InterPro:IPR013032 PROSITE:PS00022 GO:GO:0007409
PROSITE:PS01186 InterPro:IPR002049 Pfam:PF00053 SMART:SM00180
PROSITE:PS01248 PROSITE:PS50027 GO:GO:0046658 InterPro:IPR008211
Pfam:PF00055 SMART:SM00136 PROSITE:PS51117 Orphanet:3095 PDB:3ZYJ
PDBsum:3ZYJ EMBL:AB023193 EMBL:AY358365 EMBL:BX538348 EMBL:AL590427
EMBL:AL513187 EMBL:AC114491 EMBL:BC030220 IPI:IPI00412988
IPI:IPI00412989 IPI:IPI00477903 IPI:IPI00478407 IPI:IPI00478746
IPI:IPI00479203 RefSeq:NP_001106697.1 RefSeq:NP_001106699.1
RefSeq:NP_055732.2 UniGene:Hs.732535 ProteinModelPortal:Q9Y2I2
SMR:Q9Y2I2 STRING:Q9Y2I2 PhosphoSite:Q9Y2I2 DMDM:57015420
PRIDE:Q9Y2I2 DNASU:22854 Ensembl:ENST00000294649
Ensembl:ENST00000370065 Ensembl:ENST00000370066
Ensembl:ENST00000370067 Ensembl:ENST00000370068
Ensembl:ENST00000370071 Ensembl:ENST00000370073
Ensembl:ENST00000370074 Ensembl:ENST00000370076 GeneID:22854
KEGG:hsa:22854 UCSC:uc001dvc.4 UCSC:uc001dvd.1 UCSC:uc001dvf.4
UCSC:uc001dvh.4 CTD:22854 GeneCards:GC01P107682 HGNC:HGNC:23319
MIM:608818 neXtProt:NX_Q9Y2I2 PharmGKB:PA164742200 eggNOG:NOG286598
HOVERGEN:HBG052676 KO:K07522 OMA:YCECFGH ChiTaRS:NTNG1
GenomeRNAi:22854 NextBio:43337 ArrayExpress:Q9Y2I2 Bgee:Q9Y2I2
CleanEx:HS_NTNG1 Genevestigator:Q9Y2I2 GermOnline:ENSG00000162631
Uniprot:Q9Y2I2
Length = 539
Score = 228 (85.3 bits), Expect = 8.2e-33, Sum P(2) = 8.2e-33
Identities = 50/130 (38%), Positives = 66/130 (50%)
Query: 197 KQGGRCKCNGHASRCIKSPQGELVCECRHNTAGKDCEKCKPFFSDRPWGRATVYD----- 251
K GRCKCN HA+ C+ +L CEC HNT G DC KCK + RPW +
Sbjct: 292 KVRGRCKCNLHATVCVYD-NSKLTCECEHNTTGPDCGKCKKNYQGRPWSPGSYLPIPKGT 350
Query: 252 ANEC-----KGGRCKCNGHASRCIKSPQ-GALVC-ECRHNTAGKDCEKCK-PFFSDRPWG 303
AN C G C+C GH++RC ++C C+HNT G+ CE C+ +F +
Sbjct: 351 ANTCIPSISSIGNCECFGHSNRCSYIDLLNTVICVSCKHNTRGQHCELCRLGYFRN---A 407
Query: 304 RATVYDANEC 313
A + D N C
Sbjct: 408 SAQLDDENVC 417
Score = 173 (66.0 bits), Expect = 8.2e-33, Sum P(2) = 8.2e-33
Identities = 49/168 (29%), Positives = 79/168 (47%)
Query: 37 CIPDFVNAAFGQEVKVNS---VCGLESPERYCDTSGA--CH-VCDAGSPRGRFPAEYLTD 90
C P+ + +VK++ CG + PE +C C+ CDA +P P E + D
Sbjct: 50 CQPESTDMTKYLKVKLDPPDITCG-DPPETFCAMGNPYMCNNECDASTPELAHPPELMFD 108
Query: 91 LNNPSNVTCWRSEAQTSVNSLSASPDNVTLTLSLGKKFELT-YISLSFCPKSIKPDSLAI 149
T W+S P V +TLS K ELT I ++F +S +PD + +
Sbjct: 109 FEGRHPSTFWQSATWKEY----PKPLQVNITLSWSKTIELTDNIVITF--ESGRPDQMIL 162
Query: 150 YKSQDFGKSWQPLQFYSSQCKKLYGRTATGV--ISRGNEQEALCTDRH 195
KS D+G++WQP Q+Y++ C + V +S+ E +CT+ +
Sbjct: 163 EKSLDYGRTWQPYQYYATDCLDAFHMDPKSVKDLSQHTVLEIICTEEY 210
Score = 151 (58.2 bits), Expect = 5.9e-22, Sum P(2) = 5.9e-22
Identities = 36/102 (35%), Positives = 51/102 (50%)
Query: 200 GRCKCNGHASRCIKSPQ-GELVC-ECRHNTAGKDCEKCK-PFFSDRPWGRATVYDANECK 256
G C+C GH++RC ++C C+HNT G+ CE C+ +F + A + D N C
Sbjct: 362 GNCECFGHSNRCSYIDLLNTVICVSCKHNTRGQHCELCRLGYFRN---ASAQLDDENVCI 418
Query: 257 GGRCKCNGHAS---RCIKSPQGALVCECRHNTAGKDCEKCKP 295
C CN S RC G+ CEC+ T G C++C P
Sbjct: 419 --ECYCNPLGSIHDRC----NGSGFCECKTGTTGPKCDECLP 454
>UNIPROTKB|F1LYF9 [details] [associations]
symbol:Ntng1 "Protein Ntng1" species:10116 "Rattus
norvegicus" [GO:0007409 "axonogenesis" evidence=IEA] [GO:0046658
"anchored to plasma membrane" evidence=IEA] InterPro:IPR000742
PROSITE:PS50026 SMART:SM00181 RGD:1563465 InterPro:IPR013032
PROSITE:PS00022 InterPro:IPR002049 Pfam:PF00053 SMART:SM00180
PROSITE:PS01248 InterPro:IPR008211 Pfam:PF00055 SMART:SM00136
PROSITE:PS51117 IPI:IPI00565565 Ensembl:ENSRNOT00000050140
ArrayExpress:F1LYF9 Uniprot:F1LYF9
Length = 412
Score = 230 (86.0 bits), Expect = 1.5e-32, Sum P(2) = 1.5e-32
Identities = 50/130 (38%), Positives = 66/130 (50%)
Query: 197 KQGGRCKCNGHASRCIKSPQGELVCECRHNTAGKDCEKCKPFFSDRPWGRATVYD----- 251
K GRCKCN HA+ C+ +L CEC HNT G DC KCK + RPW +
Sbjct: 210 KVRGRCKCNLHATMCVYD-NSKLTCECEHNTTGPDCGKCKKNYQGRPWSPGSYLPIPKGT 268
Query: 252 ANEC-----KGGRCKCNGHASRCIKSPQ-GALVC-ECRHNTAGKDCEKCK-PFFSDRPWG 303
AN C G C+C GH++RC ++C C+HNT G+ CE C+ +F +
Sbjct: 269 ANTCIPSISSIGNCECFGHSNRCSYIDLLNTVICVSCKHNTRGQHCELCRLGYFRN---A 325
Query: 304 RATVYDANEC 313
A + D N C
Sbjct: 326 SAQLDDENVC 335
Score = 156 (60.0 bits), Expect = 1.5e-32, Sum P(2) = 1.5e-32
Identities = 39/125 (31%), Positives = 61/125 (48%)
Query: 74 CDAGSPRGRFPAEYLTDLNNPSNVTCWRSEAQTSVNSLSASPDNVTLTLSLGKKFELT-Y 132
CDA +P P E + D T W+S P V +TLS K ELT
Sbjct: 10 CDASTPELAHPPELMFDFEGRHPSTFWQSATWKEY----PKPLQVNITLSWSKTIELTDN 65
Query: 133 ISLSFCPKSIKPDSLAIYKSQDFGKSWQPLQFYSSQCKKLYGRTATGV--ISRGNEQEAL 190
I ++F +S +PD + + KS D+G++WQP Q+Y++ C + V +S+ E +
Sbjct: 66 IVITF--ESGRPDQMILEKSLDYGRTWQPYQYYATDCLHAFHMDPKSVKDLSQHTVLEII 123
Query: 191 CTDRH 195
CT+ +
Sbjct: 124 CTEEY 128
>UNIPROTKB|F1SAE9 [details] [associations]
symbol:LAMB1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0048471 "perinuclear region of cytoplasm" evidence=IEA]
[GO:0043259 "laminin-10 complex" evidence=IEA] [GO:0043208
"glycosphingolipid binding" evidence=IEA] [GO:0042476
"odontogenesis" evidence=IEA] [GO:0034446 "substrate
adhesion-dependent cell spreading" evidence=IEA] [GO:0031175
"neuron projection development" evidence=IEA] [GO:0030335 "positive
regulation of cell migration" evidence=IEA] [GO:0019899 "enzyme
binding" evidence=IEA] [GO:0016477 "cell migration" evidence=IEA]
[GO:0007566 "embryo implantation" evidence=IEA] [GO:0007162
"negative regulation of cell adhesion" evidence=IEA] [GO:0005615
"extracellular space" evidence=IEA] [GO:0005606 "laminin-1 complex"
evidence=IEA] [GO:0005201 "extracellular matrix structural
constituent" evidence=IEA] [GO:0005178 "integrin binding"
evidence=IEA] GO:GO:0048471 GO:GO:0005615 GO:GO:0016477
GO:GO:0007162 GO:GO:0030335 InterPro:IPR002049 Pfam:PF00053
SMART:SM00180 PROSITE:PS01248 PROSITE:PS50027 GO:GO:0034446
GO:GO:0031175 GO:GO:0042476 GO:GO:0007566 InterPro:IPR009053
SUPFAM:SSF46579 GO:GO:0005201 GO:GO:0043208 InterPro:IPR008211
Pfam:PF00055 SMART:SM00136 PROSITE:PS51117 GO:GO:0005606
GO:GO:0043259 GeneTree:ENSGT00620000087753 InterPro:IPR013015
PROSITE:PS51116 OMA:NTWQLAS EMBL:CU929844
Ensembl:ENSSSCT00000016825 Uniprot:F1SAE9
Length = 1799
Score = 239 (89.2 bits), Expect = 1.7e-32, Sum P(2) = 1.7e-32
Identities = 54/132 (40%), Positives = 71/132 (53%)
Query: 200 GRCKCNGHASRCIK----SPQGE-LV---CECRHNTAGKDCEKCKPFFSDRPWGRATVYD 251
G C C GHAS C S + E +V C CRHNT G +CE C F+ D PW A +
Sbjct: 282 GNCFCYGHASECAPVDGFSEEVEGMVHGHCMCRHNTKGLNCELCMDFYHDLPWRPAEGRN 341
Query: 252 ANECKGGRCKCNGHASRC-----IKSPQGAL---VCE-CRHNTAGKDCEKCKPFFSDRPW 302
+N CK +C CN H+S C + G + VC+ C+HNT G++CE+CKPF+ P
Sbjct: 342 SNACK--KCNCNEHSSSCHFDMAVYLATGNVSGGVCDDCQHNTMGRNCERCKPFYYQHP- 398
Query: 303 GRATVYDANECK 314
V D N C+
Sbjct: 399 -ERDVRDPNLCE 409
Score = 163 (62.4 bits), Expect = 1.7e-32, Sum P(2) = 1.7e-32
Identities = 47/190 (24%), Positives = 90/190 (47%)
Query: 15 AVCGEKIDLNSDPCYENGRPR-RCIPDFVNAAFG--QEVKVNSVCGLESPERYCDTSGA- 70
A+CG ++ +P + G C P + G Q++ V S CGL PE YC S
Sbjct: 26 ALCGAQVSAQ-EPEFSYGCAEGSCYPATGDLLIGRAQKLSVTSTCGLHKPEPYCIVSHLQ 84
Query: 71 ----CHVCDAGSPRGRFPAEYLTDLNNPSNVTCWRSEAQTSVNSLSASP-DNVTLTLSLG 125
C +C++ P + D + NV + + + S + +NVT+ L L
Sbjct: 85 EDKKCFICNSQDP---YHETLNPDSHLIENVVTTFAPNRLKIWWQSENGVENVTIQLDLE 141
Query: 126 KKFELTYISLSFCPKSIKPDSLAIYKSQDFGKSWQPLQFYSSQCKKLYGRTATGVISRGN 185
+F T++ ++F K+ +P ++ I +S DFG++W ++++ C+ + TG + + +
Sbjct: 142 AEFHFTHLIMTF--KTFRPAAMLIERSSDFGRTWGVYRYFAYDCESSFPGIPTGPMKKVD 199
Query: 186 EQEALCTDRH 195
+ +C R+
Sbjct: 200 D--IICDSRY 207
Score = 106 (42.4 bits), Expect = 1.1e-14, Sum P(2) = 1.1e-14
Identities = 28/106 (26%), Positives = 42/106 (39%)
Query: 199 GGRCKCNGHAS-RCIKSPQGELVCECRHNTAGKDCEKCKPFFSDRPWGRATVYDANECKG 257
G C+C+ S + P G C+CR N G+ C++C P +G + N CK
Sbjct: 783 GLACECDPQGSLSSVCDPNGGQ-CQCRPNVVGRKCDRCAP----GTFG----FGPNGCKP 833
Query: 258 GRCKCNGHASRCIKSPQGALVCECRHNTAGKDCEKCKPFFSDRPWG 303
C G + G C C + C++C P + WG
Sbjct: 834 CECHLQGSVNAFCDPVTGQ--CHCFQGVYARQCDRCLPGY----WG 873
Score = 103 (41.3 bits), Expect = 2.3e-14, Sum P(2) = 2.3e-14
Identities = 30/115 (26%), Positives = 49/115 (42%)
Query: 202 CKCN--GHASRCIKSPQGELVCECRHNTAGKDCEKCKPFFSDRPWGRATVYDANECKGGR 259
C+C+ G + G+ C C + C++C P + WG + C+
Sbjct: 834 CECHLQGSVNAFCDPVTGQ--CHCFQGVYARQCDRCLPGY----WGFPS------CQP-- 879
Query: 260 CKCNGHASRCIKSPQGALVCECRHNTAGKDCEKCKPFFSDRPWGRATVYDANECK 314
C+CNGHA C S G C+ T G +CE+C + +G A + + C+
Sbjct: 880 CQCNGHAEDC-DSVTGEC-SSCQDYTTGHNCERCLAGY----YGDAIIGSGDHCR 928
Score = 99 (39.9 bits), Expect = 5.9e-14, Sum P(2) = 5.9e-14
Identities = 29/110 (26%), Positives = 46/110 (41%)
Query: 204 CNGHASRCIKSPQGELVCECRHNTAGKDCEKCKPFFSDRPWGRATVYDANECKGGRCKCN 263
CNG +C K+ G+ C C N G++C++C P W A+ C+ C C+
Sbjct: 1053 CNGSDCQCDKTT-GQ--CLCLPNVIGQNCDRCAP----NTWQLAS---GTGCEP--CNCD 1100
Query: 264 GHASRCIKSPQGALVCECRHNTAGKDCEKCKPFFSDRPWGRATVYDANEC 313
S + C+C G+ C +C+ F WG +V + C
Sbjct: 1101 AAHSFGPSCNEFTGQCQCMPGFGGRTCSECQELF----WGDPSV-ECRAC 1145
Score = 96 (38.9 bits), Expect = 1.2e-13, Sum P(2) = 1.2e-13
Identities = 35/136 (25%), Positives = 52/136 (38%)
Query: 168 QCKKLYGRTAT--GVISRGNEQEALCTDRHKKQGGRCK-CNGHASRCIKSPQGELV--CE 222
QC K G+ VI + ++ A T + G C+ CN A+ E C+
Sbjct: 1059 QCDKTTGQCLCLPNVIGQNCDRCAPNTWQ-LASGTGCEPCNCDAAHSFGPSCNEFTGQCQ 1117
Query: 223 CRHNTAGKDCEKCKPFFSDRPWGRATVYDANECKGGRCKCNGHASRCIKSPQGALVCECR 282
C G+ C +C+ F WG +V EC+ C C+ + Q C C
Sbjct: 1118 CMPGFGGRTCSECQELF----WGDPSV----ECRA--CDCDPRGIETPQCDQSTGQCVCV 1167
Query: 283 HNTAGKDCEKCKPFFS 298
G C+KC +S
Sbjct: 1168 EGVEGPRCDKCTRGYS 1183
Score = 94 (38.1 bits), Expect = 1.9e-13, Sum P(2) = 1.9e-13
Identities = 37/149 (24%), Positives = 58/149 (38%)
Query: 168 QCKKLYGRTATGVISRGNEQEALCTDRHKKQGGRCKCNGHASRCIKSPQGELVCECRHNT 227
+CK Y + + N E D Q G C+G+ G+ C C+ +
Sbjct: 389 RCKPFYYQHPERDVRDPNLCEPCTCDPAGSQNGGI-CDGYTDFSAGLIAGQ--CRCKLHV 445
Query: 228 AGKDCEKCKPFFSDRPWGRATVYDANECKGGRCKCNGHASRCIKSPQGALV--CECRHNT 285
G+ C+ CK F +G T D CK C CN + +P + C C+
Sbjct: 446 EGEHCDICKEGF----YG-LTAEDPFGCKS--CACNPLGTIPGGNPCDSETGYCYCKRLV 498
Query: 286 AGKDCEKCKPFFSDRPWGRATVYDANECK 314
G+ C++C P WG + D + C+
Sbjct: 499 TGQHCDQCLP----EHWGLSN--DLDGCR 521
Score = 89 (36.4 bits), Expect = 6.4e-13, Sum P(2) = 6.4e-13
Identities = 31/108 (28%), Positives = 49/108 (45%)
Query: 199 GGRCK-CNGHASRCIKSPQG---ELV-C-ECRHNTAGKDCEKCKPFFSDRPWGRATVYDA 252
GG C+ C H + P+ E C +C ++T G C+ C+ + +G A D
Sbjct: 983 GGTCQPCQCHHNIDTTDPEACDKETGRCLKCLYHTEGVHCQLCRLGY----YGDALQQDC 1038
Query: 253 NECKG---GRCK--CNGHASRCIKSPQGALVCECRHNTAGKDCEKCKP 295
+C G + CNG +C K+ G C C N G++C++C P
Sbjct: 1039 RKCVCNYLGTVQEHCNGSDCQCDKTT-GQ--CLCLPNVIGQNCDRCAP 1083
Score = 83 (34.3 bits), Expect = 2.7e-12, Sum P(2) = 2.7e-12
Identities = 19/77 (24%), Positives = 32/77 (41%)
Query: 221 CECRHNTAGKDCEKCKPFFSDRPWGRATVYDANECKGGRCKCNGHASRCIKSPQGALVCE 280
C C+ G+ C++C P WG + D + C+ C G + + G C
Sbjct: 492 CYCKRLVTGQHCDQCLP----EHWGLSN--DLDGCRPCDCDLGGALNNSCSAESGQ--CL 543
Query: 281 CRHNTAGKDCEKCKPFF 297
CR + G+ C + + F
Sbjct: 544 CRPHMIGRQCNEVESGF 560
Score = 79 (32.9 bits), Expect = 7.0e-12, Sum P(2) = 7.0e-12
Identities = 38/151 (25%), Positives = 58/151 (38%)
Query: 169 CKK-LYGRTATGVISRGNE-QEALCTDRHKKQGGRCKCNGHASRCIKSPQG-ELVCECRH 225
C++ L G +I G+ + C D + GR AS C + P +L C C
Sbjct: 908 CERCLAGYYGDAIIGSGDHCRPCPCPDG--PESGR----QFASSCYQDPVTLQLACVCNP 961
Query: 226 NTAGKDCEKCKPFFSDRPWGRATVYDANECKGGRCKCNGHAS---RCIKSPQGALVCECR 282
G CE C F P + V C+ +C N + C K L +C
Sbjct: 962 GYIGSRCEDCAAGFFGNP---SEV--GGTCQPCQCHHNIDTTDPEACDKETGRCL--KCL 1014
Query: 283 HNTAGKDCEKCKPFFSDRPWGRATVYDANEC 313
++T G C+ C+ + +G A D +C
Sbjct: 1015 YHTEGVHCQLCRLGY----YGDALQQDCRKC 1041
>MGI|MGI:1888978 [details] [associations]
symbol:Ntn4 "netrin 4" species:10090 "Mus musculus"
[GO:0005576 "extracellular region" evidence=IEA] [GO:0005578
"proteinaceous extracellular matrix" evidence=IEA] [GO:0005604
"basement membrane" evidence=ISS;IDA] [GO:0016322 "neuron
remodeling" evidence=IDA] [GO:0043237 "laminin-1 binding"
evidence=IDA] [GO:0060668 "regulation of branching involved in
salivary gland morphogenesis by extracellular matrix-epithelial
cell signaling" evidence=IDA] InterPro:IPR001134 PROSITE:PS50189
MGI:MGI:1888978 GO:GO:0016322 PROSITE:PS00022 InterPro:IPR002049
InterPro:IPR008993 Pfam:PF00053 SMART:SM00180 SUPFAM:SSF50242
PROSITE:PS01248 PROSITE:PS50027 GO:GO:0005604 InterPro:IPR018933
Pfam:PF01759 SMART:SM00643 GO:GO:0043237 InterPro:IPR008211
Pfam:PF00055 SMART:SM00136 PROSITE:PS51117
GeneTree:ENSGT00700000104042 CTD:59277 eggNOG:NOG329215
HOVERGEN:HBG082019 KO:K06845 OMA:RSQDFGK GO:GO:0060668
EMBL:AF268066 EMBL:AF281278 EMBL:AC124585 EMBL:AC151976
IPI:IPI00119840 RefSeq:NP_067295.2 UniGene:Mm.483868
ProteinModelPortal:Q9JI33 SMR:Q9JI33 STRING:Q9JI33
PhosphoSite:Q9JI33 PRIDE:Q9JI33 Ensembl:ENSMUST00000020204
GeneID:57764 KEGG:mmu:57764 HOGENOM:HOG000060085 InParanoid:Q9JI33
OrthoDB:EOG4M0F17 NextBio:313932 Bgee:Q9JI33 CleanEx:MM_NTN4
Genevestigator:Q9JI33 GermOnline:ENSMUSG00000020019 Uniprot:Q9JI33
Length = 628
Score = 235 (87.8 bits), Expect = 2.8e-32, Sum P(2) = 2.8e-32
Identities = 56/140 (40%), Positives = 70/140 (50%)
Query: 200 GRCKCNGHASRC--------IKSPQGELV----CECRHNTAGKDCEKCKPFFSDRPWGRA 247
G C CNGHA +C IK+P V C C+HNTAG C+ C P ++DRPW A
Sbjct: 260 GSCFCNGHADQCLPVEGFRPIKAPGAFHVVHGRCMCKHNTAGSHCQHCAPLYNDRPWEAA 319
Query: 248 TVYDA--NECKGGRCKCNGHASRC-----IKSPQGAL---VCE-CRHNTAGKDCEKCKP- 295
NEC+ CKCNGHA C + G VC C+HNT G+ C++CKP
Sbjct: 320 DGRTGAPNECR--TCKCNGHADTCHFDVNVWEASGNRSGGVCNNCQHNTEGQHCQRCKPG 377
Query: 296 FFSD--RPWGRATVYDANEC 313
F+ D RP+ A C
Sbjct: 378 FYRDLRRPFSAPDACKACSC 397
Score = 152 (58.6 bits), Expect = 2.8e-32, Sum P(2) = 2.8e-32
Identities = 44/175 (25%), Positives = 80/175 (45%)
Query: 31 NGR-PRRCIPDFVNAAFGQEVKVNSVCGLESPERYCDTSG---------ACHVCDAGSPR 80
N R + C P N A G++++ +++CG + E +C S C C+A
Sbjct: 27 NSRCEKACNPRMGNLALGRKLRADTMCGQNATELFCFYSENADLTCRQPKCDKCNAAHSH 86
Query: 81 GRFPAEYLTDLNNPSNVTCWRSEAQTSVNSLSASPDNVTLTLSLGKKFELTYISLSFCPK 140
P + D + T W+S + L L +F T++ + F K
Sbjct: 87 LAHPPSAMADSSFRFPRTWWQSAEDVHREKIQ---------LDLEAEFYFTHLIMVF--K 135
Query: 141 SIKPDSLAIYKSQDFGKSWQPLQFYSSQCKKLYGRTATGVISRGNEQEALCTDRH 195
S +P ++ + +SQDFGK+W+P +++++ C +G V+ +G A+CT R+
Sbjct: 136 SPRPAAMVLDRSQDFGKTWKPYKYFATNCSATFG-LEDDVVKKG----AICTSRY 185
Score = 134 (52.2 bits), Expect = 1.9e-17, Sum P(2) = 1.9e-17
Identities = 34/104 (32%), Positives = 45/104 (43%)
Query: 202 CKCNGHASRC-----IKSPQGEL---VCE-CRHNTAGKDCEKCKP-FFSD--RPWGRATV 249
CKCNGHA C + G VC C+HNT G+ C++CKP F+ D RP+
Sbjct: 332 CKCNGHADTCHFDVNVWEASGNRSGGVCNNCQHNTEGQHCQRCKPGFYRDLRRPFSAPDA 391
Query: 250 YDANECKGGRCKCNGHASRCIKSPQGALVCECRHNTAGKDCEKC 293
A C +S P C C+ AG C++C
Sbjct: 392 CKACSCHPVGSAILPFSSVTFCDPSNG-DCPCKPGVAGPHCDRC 434
>UNIPROTKB|F1LWK9 [details] [associations]
symbol:Ntng1 "Protein Ntng1" species:10116 "Rattus
norvegicus" [GO:0007409 "axonogenesis" evidence=IEA] [GO:0046658
"anchored to plasma membrane" evidence=IEA] InterPro:IPR000742
PROSITE:PS50026 SMART:SM00181 RGD:1563465 InterPro:IPR013032
PROSITE:PS00022 InterPro:IPR002049 Pfam:PF00053 SMART:SM00180
PROSITE:PS01248 PROSITE:PS50027 InterPro:IPR008211 Pfam:PF00055
SMART:SM00136 PROSITE:PS51117 GeneTree:ENSGT00700000104042
IPI:IPI00948119 Ensembl:ENSRNOT00000066218 ArrayExpress:F1LWK9
Uniprot:F1LWK9
Length = 457
Score = 230 (86.0 bits), Expect = 3.2e-32, Sum P(2) = 3.2e-32
Identities = 50/130 (38%), Positives = 66/130 (50%)
Query: 197 KQGGRCKCNGHASRCIKSPQGELVCECRHNTAGKDCEKCKPFFSDRPWGRATVYD----- 251
K GRCKCN HA+ C+ +L CEC HNT G DC KCK + RPW +
Sbjct: 210 KVRGRCKCNLHATMCVYD-NSKLTCECEHNTTGPDCGKCKKNYQGRPWSPGSYLPIPKGT 268
Query: 252 ANEC-----KGGRCKCNGHASRCIKSPQ-GALVC-ECRHNTAGKDCEKCK-PFFSDRPWG 303
AN C G C+C GH++RC ++C C+HNT G+ CE C+ +F +
Sbjct: 269 ANTCIPSISSIGNCECFGHSNRCSYIDLLNTVICVSCKHNTRGQHCELCRLGYFRN---A 325
Query: 304 RATVYDANEC 313
A + D N C
Sbjct: 326 SAQLDDENVC 335
Score = 156 (60.0 bits), Expect = 3.2e-32, Sum P(2) = 3.2e-32
Identities = 39/125 (31%), Positives = 61/125 (48%)
Query: 74 CDAGSPRGRFPAEYLTDLNNPSNVTCWRSEAQTSVNSLSASPDNVTLTLSLGKKFELT-Y 132
CDA +P P E + D T W+S P V +TLS K ELT
Sbjct: 10 CDASTPELAHPPELMFDFEGRHPSTFWQSATWKEY----PKPLQVNITLSWSKTIELTDN 65
Query: 133 ISLSFCPKSIKPDSLAIYKSQDFGKSWQPLQFYSSQCKKLYGRTATGV--ISRGNEQEAL 190
I ++F +S +PD + + KS D+G++WQP Q+Y++ C + V +S+ E +
Sbjct: 66 IVITF--ESGRPDQMILEKSLDYGRTWQPYQYYATDCLHAFHMDPKSVKDLSQHTVLEII 123
Query: 191 CTDRH 195
CT+ +
Sbjct: 124 CTEEY 128
Score = 151 (58.2 bits), Expect = 3.8e-20, Sum P(2) = 3.8e-20
Identities = 36/102 (35%), Positives = 51/102 (50%)
Query: 200 GRCKCNGHASRCIKSPQ-GELVC-ECRHNTAGKDCEKCK-PFFSDRPWGRATVYDANECK 256
G C+C GH++RC ++C C+HNT G+ CE C+ +F + A + D N C
Sbjct: 280 GNCECFGHSNRCSYIDLLNTVICVSCKHNTRGQHCELCRLGYFRN---ASAQLDDENVCI 336
Query: 257 GGRCKCNGHAS---RCIKSPQGALVCECRHNTAGKDCEKCKP 295
C CN S RC G+ CEC+ T G C++C P
Sbjct: 337 --ECYCNPLGSIHDRC----NGSGFCECKTGTTGPKCDECLP 372
>MGI|MGI:96743 [details] [associations]
symbol:Lamb1 "laminin B1" species:10090 "Mus musculus"
[GO:0005178 "integrin binding" evidence=IMP] [GO:0005201
"extracellular matrix structural constituent" evidence=ISO]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005576
"extracellular region" evidence=IEA] [GO:0005578 "proteinaceous
extracellular matrix" evidence=IDA] [GO:0005604 "basement membrane"
evidence=ISO;IDA] [GO:0005605 "basal lamina" evidence=IDA]
[GO:0005606 "laminin-1 complex" evidence=ISO;IDA] [GO:0005607
"laminin-2 complex" evidence=ISO] [GO:0005615 "extracellular space"
evidence=ISO] [GO:0007155 "cell adhesion" evidence=IEA] [GO:0007162
"negative regulation of cell adhesion" evidence=IDA] [GO:0007566
"embryo implantation" evidence=IMP] [GO:0007611 "learning or
memory" evidence=NAS] [GO:0016477 "cell migration" evidence=IMP]
[GO:0019899 "enzyme binding" evidence=IPI] [GO:0030335 "positive
regulation of cell migration" evidence=ISO] [GO:0031012
"extracellular matrix" evidence=ISO] [GO:0031175 "neuron projection
development" evidence=ISO;IDA] [GO:0034446 "substrate
adhesion-dependent cell spreading" evidence=ISO] [GO:0042476
"odontogenesis" evidence=ISO] [GO:0043208 "glycosphingolipid
binding" evidence=IDA] [GO:0043256 "laminin complex" evidence=IDA]
[GO:0043257 "laminin-8 complex" evidence=ISO] [GO:0043259
"laminin-10 complex" evidence=ISO;IPI] [GO:0048471 "perinuclear
region of cytoplasm" evidence=IDA] [GO:0070062 "extracellular
vesicular exosome" evidence=ISO] MGI:MGI:96743 GO:GO:0048471
GO:GO:0016477 GO:GO:0007155 PROSITE:PS00022 GO:GO:0007611
Reactome:REACT_127416 GO:GO:0005178 PROSITE:PS01186 GO:GO:0007162
GO:GO:0030335 InterPro:IPR002049 Pfam:PF00053 SMART:SM00180
PROSITE:PS01248 PROSITE:PS50027 GO:GO:0031175 GO:GO:0042476
GO:GO:0007566 InterPro:IPR009053 SUPFAM:SSF46579 GO:GO:0005201
GO:GO:0043208 InterPro:IPR008211 Pfam:PF00055 SMART:SM00136
PROSITE:PS51117 GO:GO:0005606 GO:GO:0043259 eggNOG:NOG241384
OrthoDB:EOG44BB1B GO:GO:0005607 GO:GO:0043257
GeneTree:ENSGT00620000087753 InterPro:IPR013015 PROSITE:PS51116
HOVERGEN:HBG052301 ChiTaRS:LAMB1 EMBL:M15525 EMBL:CR974423
EMBL:CT571245 EMBL:X05212 IPI:IPI00988644 PIR:A26413
UniGene:Mm.172674 PDB:4AQS PDBsum:4AQS ProteinModelPortal:P02469
SMR:P02469 MINT:MINT-1206337 STRING:P02469 PhosphoSite:P02469
PaxDb:P02469 PRIDE:P02469 Ensembl:ENSMUST00000169088
InParanoid:P02469 Bgee:P02469 CleanEx:MM_LAMB1-1
Genevestigator:P02469 GermOnline:ENSMUSG00000002900 Uniprot:P02469
Length = 1786
Score = 234 (87.4 bits), Expect = 4.3e-32, Sum P(2) = 4.3e-32
Identities = 51/132 (38%), Positives = 70/132 (53%)
Query: 200 GRCKCNGHASRCI------KSPQGELV--CECRHNTAGKDCEKCKPFFSDRPWGRATVYD 251
G C C GHAS C + +G + C CRHNT G +CE C F+ D PW A +
Sbjct: 269 GNCFCYGHASECAPVDGVNEEVEGMVHGHCMCRHNTKGLNCELCMDFYHDLPWRPAEGRN 328
Query: 252 ANECKGGRCKCNGHASRC-----IKSPQGAL---VCE-CRHNTAGKDCEKCKPFFSDRPW 302
+N CK +C CN H+S C + G + VC+ C+HNT G++CE+CKPF+ P
Sbjct: 329 SNACK--KCNCNEHSSSCHFDMAVFLATGNVSGGVCDNCQHNTMGRNCEQCKPFYFQHP- 385
Query: 303 GRATVYDANECK 314
+ D N C+
Sbjct: 386 -ERDIRDPNLCE 396
Score = 164 (62.8 bits), Expect = 4.3e-32, Sum P(2) = 4.3e-32
Identities = 49/188 (26%), Positives = 89/188 (47%)
Query: 16 VCGEKIDLNSDPCYENGRPRRCIPDFVNAAFG--QEVKVNSVCGLESPERYCDTSGA--- 70
VC ++ + S C E C P + G Q++ V S CGL PE YC S
Sbjct: 19 VCAQEPEF-SYGCAEGS----CYPATGDLLIGRAQKLSVTSTCGLHKPEPYCIVSHLQED 73
Query: 71 --CHVCDAGSPRGRFPAEYLTDLNNPSNVTCWRSEAQTSVNSLSASP-DNVTLTLSLGKK 127
C +CD+ P + D + NV + + + S + +NVT+ L L +
Sbjct: 74 KKCFICDSRDP---YHETLNPDSHLIENVVTTFAPNRLKIWWQSENGVENVTIQLDLEAE 130
Query: 128 FELTYISLSFCPKSIKPDSLAIYKSQDFGKSWQPLQFYSSQCKKLYGRTATGVISRGNEQ 187
F T++ ++F K+ +P ++ I +S DFGK+W ++++ C+ + +TG + + ++
Sbjct: 131 FHFTHLIMTF--KTFRPAAMLIERSSDFGKAWGVYRYFAYDCESSFPGISTGPMKKVDD- 187
Query: 188 EALCTDRH 195
+C R+
Sbjct: 188 -IICDSRY 194
Score = 148 (57.2 bits), Expect = 3.5e-19, Sum P(2) = 3.5e-19
Identities = 36/117 (30%), Positives = 55/117 (47%)
Query: 201 RCKCNGHASRC-----IKSPQGEL---VCE-CRHNTAGKDCEKCKPFFSDRPWGRATVYD 251
+C CN H+S C + G + VC+ C+HNT G++CE+CKPF+ P + D
Sbjct: 334 KCNCNEHSSSCHFDMAVFLATGNVSGGVCDNCQHNTMGRNCEQCKPFYFQHP--ERDIRD 391
Query: 252 ANECKGGRCK---------CNGHASRCIKSPQGALVCECRHNTAGKDCEKCKPFFSD 299
N C+ C C+G+ + G C C+ + G+ C+ CK F D
Sbjct: 392 PNLCEPCTCDPAGSENGGICDGYTDFSVGLIAGQ--CRCKLHVEGERCDVCKEGFYD 446
Score = 112 (44.5 bits), Expect = 2.0e-15, Sum P(2) = 2.0e-15
Identities = 30/102 (29%), Positives = 40/102 (39%)
Query: 202 CKCNGHASRCIKSPQGELVCECRHNTAGKDCEKCKP-FFSDRPWGRATVYDANECKGGRC 260
C+CNGHA C + GE + C+ T G +CE+C ++ D G C G
Sbjct: 867 CQCNGHALDC-DTVTGECL-SCQDYTTGHNCERCLAGYYGDPIIGSGDHCRPCPCPDGPD 924
Query: 261 KCNGHASRCIKSPQGA-LVCECRHNTAGKDCEKCKPFFSDRP 301
A C + P L C C G C+ C F P
Sbjct: 925 SGRQFARSCYQDPVTLQLACVCDPGYIGSRCDDCASGFFGNP 966
Score = 109 (43.4 bits), Expect = 4.0e-15, Sum P(2) = 4.0e-15
Identities = 30/106 (28%), Positives = 43/106 (40%)
Query: 199 GGRCKCNGHAS-RCIKSPQGELVCECRHNTAGKDCEKCKPFFSDRPWGRATVYDANECKG 257
G C+C+ S + P G C+CR N G+ C +C P +G + N CK
Sbjct: 770 GLACECDPQGSLSSVCDPNGGQ-CQCRPNVVGRTCNRCAP----GTFG----FGPNGCKP 820
Query: 258 GRCKCNGHASRCIKSPQGALVCECRHNTAGKDCEKCKPFFSDRPWG 303
C G AS + G C C + C++C P + WG
Sbjct: 821 CDCHLQGSASAFCDAITGQ--CHCFQGIYARQCDRCLPGY----WG 860
Score = 109 (43.4 bits), Expect = 4.0e-15, Sum P(2) = 4.0e-15
Identities = 31/110 (28%), Positives = 44/110 (40%)
Query: 204 CNGHASRCIKSPQGELVCECRHNTAGKDCEKCKPFFSDRPWGRATVYDANECKGGRCKCN 263
CNG C K+ G+ C C N G++C++C P W A+ C G C CN
Sbjct: 1040 CNGSDCHCDKAT-GQ--CSCLPNVIGQNCDRCAP----NTWQLAS---GTGC--GPCNCN 1087
Query: 264 GHASRCIKSPQGALVCECRHNTAGKDCEKCKPFFSDRPWGRATVYDANEC 313
S + C+C G+ C +C+ F WG V + C
Sbjct: 1088 AAHSFGPSCNEFTGQCQCMPGFGGRTCSECQELF----WGDPDV-ECRAC 1132
Score = 102 (41.0 bits), Expect = 2.1e-14, Sum P(2) = 2.1e-14
Identities = 27/92 (29%), Positives = 41/92 (44%)
Query: 202 CKCNGHASRCIKSPQGELVCECRHNTAGKDCEKCKPFFSDRPWGRATVYDANECKGGRCK 261
C G AS + G+ C C + C++C P + WG + C+ C+
Sbjct: 823 CHLQGSASAFCDAITGQ--CHCFQGIYARQCDRCLPGY----WGFPS------CQP--CQ 868
Query: 262 CNGHASRCIKSPQGALVCECRHNTAGKDCEKC 293
CNGHA C + G + C+ T G +CE+C
Sbjct: 869 CNGHALDC-DTVTGECL-SCQDYTTGHNCERC 898
Score = 101 (40.6 bits), Expect = 2.7e-14, Sum P(2) = 2.7e-14
Identities = 38/150 (25%), Positives = 60/150 (40%)
Query: 168 QCKKLYGRTATGVISRGNEQE-ALCTDRHKKQGGRCKCNGHASRCIKSPQGELVCECRHN 226
QCK Y + I N E C + GG C +G+ + G+ C C+ +
Sbjct: 376 QCKPFYFQHPERDIRDPNLCEPCTCDPAGSENGGIC--DGYTDFSVGLIAGQ--CRCKLH 431
Query: 227 TAGKDCEKCKPFFSDRPWGRATVYDANECKGGRCKCNGHASRCIKSPQGALV--CECRHN 284
G+ C+ CK F D + D CK C CN + +P + C C+
Sbjct: 432 VEGERCDVCKEGFYD-----LSAEDPYGCKS--CACNPLGTIPGGNPCDSETGYCYCKRL 484
Query: 285 TAGKDCEKCKPFFSDRPWGRATVYDANECK 314
G+ C++C P + WG + D + C+
Sbjct: 485 VTGQRCDQCLP----QHWGLSN--DLDGCR 508
Score = 96 (38.9 bits), Expect = 8.9e-14, Sum P(2) = 8.9e-14
Identities = 26/99 (26%), Positives = 36/99 (36%)
Query: 200 GRCKCNGHASRCIKSPQGELVCECRHNTAGKDCEKCKPFFSDRPWGRATVYDANECKGGR 259
G C CN S + C+C G+ C +C+ F WG V EC+
Sbjct: 1082 GPCNCNAAHSFGPSCNEFTGQCQCMPGFGGRTCSECQELF----WGDPDV----ECRA-- 1131
Query: 260 CKCNGHASRCIKSPQGALVCECRHNTAGKDCEKCKPFFS 298
C C+ + Q C C G C+KC +S
Sbjct: 1132 CDCDPRGIETPQCDQSTGQCVCVEGVEGPRCDKCTRGYS 1170
Score = 47 (21.6 bits), Expect = 1.0e-08, Sum P(2) = 1.0e-08
Identities = 28/104 (26%), Positives = 39/104 (37%)
Query: 206 GH-ASRCIKSPQGELVCECRHNTAGKDCEKCK-PFFSD--RPWGRATVYD------ANEC 255
GH RC+ G+ + +G C C P D R + R+ D A C
Sbjct: 892 GHNCERCLAGYYGDPIIG-----SGDHCRPCPCPDGPDSGRQFARSCYQDPVTLQLACVC 946
Query: 256 KGGRC--KCNGHASRCIKSPQ---GALV-CECRHNTAGKDCEKC 293
G +C+ AS +P G+ C+C HN D E C
Sbjct: 947 DPGYIGSRCDDCASGFFGNPSDFGGSCQPCQCHHNIDTTDPEAC 990
>UNIPROTKB|F1MNT4 [details] [associations]
symbol:LAMB1 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0048471 "perinuclear region of cytoplasm" evidence=IEA]
[GO:0043259 "laminin-10 complex" evidence=IEA] [GO:0043208
"glycosphingolipid binding" evidence=IEA] [GO:0042476
"odontogenesis" evidence=IEA] [GO:0034446 "substrate
adhesion-dependent cell spreading" evidence=IEA] [GO:0031175
"neuron projection development" evidence=IEA] [GO:0030335 "positive
regulation of cell migration" evidence=IEA] [GO:0019899 "enzyme
binding" evidence=IEA] [GO:0016477 "cell migration" evidence=IEA]
[GO:0007566 "embryo implantation" evidence=IEA] [GO:0007162
"negative regulation of cell adhesion" evidence=IEA] [GO:0005615
"extracellular space" evidence=IEA] [GO:0005606 "laminin-1 complex"
evidence=IEA] [GO:0005201 "extracellular matrix structural
constituent" evidence=IEA] [GO:0005178 "integrin binding"
evidence=IEA] GO:GO:0048471 GO:GO:0005615 GO:GO:0016477
GO:GO:0007162 GO:GO:0030335 InterPro:IPR002049 Pfam:PF00053
SMART:SM00180 PROSITE:PS01248 PROSITE:PS50027 GO:GO:0034446
GO:GO:0031175 GO:GO:0042476 GO:GO:0007566 InterPro:IPR009053
SUPFAM:SSF46579 GO:GO:0005201 GO:GO:0043208 InterPro:IPR008211
Pfam:PF00055 SMART:SM00136 PROSITE:PS51117 GO:GO:0005606
GO:GO:0043259 GeneTree:ENSGT00620000087753 InterPro:IPR013015
PROSITE:PS51116 EMBL:DAAA02010597 EMBL:DAAA02010596 IPI:IPI01017612
Ensembl:ENSBTAT00000015166 OMA:NTWQLAS Uniprot:F1MNT4
Length = 1798
Score = 233 (87.1 bits), Expect = 4.4e-32, Sum P(2) = 4.4e-32
Identities = 50/132 (37%), Positives = 71/132 (53%)
Query: 200 GRCKCNGHASRCI------KSPQGELV--CECRHNTAGKDCEKCKPFFSDRPWGRATVYD 251
G C C GHAS C + +G + C CRHNT G +CE+C F+ D PW A +
Sbjct: 281 GNCFCYGHASECAPVDGVNEEVEGMVHGHCMCRHNTKGLNCEQCMDFYHDLPWRPAEGRN 340
Query: 252 ANECKGGRCKCNGHASRC-----IKSPQGAL---VCE-CRHNTAGKDCEKCKPFFSDRPW 302
+N CK +C CN H+S C + G + VC+ C+HNT G++CE+CKPF+ P
Sbjct: 341 SNACK--KCNCNEHSSSCHFDMAVYLATGNVSGGVCDDCQHNTMGRNCEQCKPFYYQHP- 397
Query: 303 GRATVYDANECK 314
+ D + C+
Sbjct: 398 -ERDIRDPSLCE 408
Score = 165 (63.1 bits), Expect = 4.4e-32, Sum P(2) = 4.4e-32
Identities = 48/190 (25%), Positives = 90/190 (47%)
Query: 15 AVCGEKIDLNSDPCYENGRPR-RCIPDFVNAAFG--QEVKVNSVCGLESPERYCDTSGA- 70
A+CG + +P + G C P + G Q++ V S CGL PE YC S
Sbjct: 25 ALCGVGVSAQ-EPDFSYGCAEGSCYPATGDLLIGRAQKLSVTSTCGLHKPEPYCIVSHLQ 83
Query: 71 ----CHVCDAGSPRGRFPAEYLTDLNNPSNVTCWRSEAQTSVNSLSASP-DNVTLTLSLG 125
C +C++ P + D + NV + + + S + +NVT+ L L
Sbjct: 84 EDKKCFICNSQDP---YHETLNPDSHLIENVVTTFAPNRLKIWWQSENGVENVTIQLDLE 140
Query: 126 KKFELTYISLSFCPKSIKPDSLAIYKSQDFGKSWQPLQFYSSQCKKLYGRTATGVISRGN 185
+F T++ ++F K+ +P ++ I +S DFGK+W ++++ C+ + +TG + + +
Sbjct: 141 AEFHFTHLIMTF--KTFRPAAMLIERSSDFGKTWGVYRYFAYDCESSFPGISTGPMKKVD 198
Query: 186 EQEALCTDRH 195
+ +C R+
Sbjct: 199 D--IICDSRY 206
Score = 105 (42.0 bits), Expect = 8.1e-15, Sum P(2) = 8.1e-15
Identities = 29/94 (30%), Positives = 42/94 (44%)
Query: 202 CKCN--GHASRCIKSPQGELVCECRHNTAGKDCEKCKPFFSDRPWGRATVYDANECKGGR 259
C+C+ G S G+ C C + C++C P F WG + C+
Sbjct: 833 CECHLQGSVSAFCDPITGQ--CHCFQGVYTRQCDRCLPGF----WGFPS------CQP-- 878
Query: 260 CKCNGHASRCIKSPQGALVCECRHNTAGKDCEKC 293
C+CNGHA C S G + C+ T G +CE+C
Sbjct: 879 CQCNGHADDC-DSVTGECL-SCQDYTTGHNCERC 910
Score = 104 (41.7 bits), Expect = 1.0e-14, Sum P(2) = 1.0e-14
Identities = 31/107 (28%), Positives = 41/107 (38%)
Query: 199 GGRCKCNGHAS-RCIKSPQGELVCECRHNTAGKDCEKCKP-FFSDRPWGRATVYDANECK 256
G C+C+ S + P G C+CR N G+ C++C P F P G CK
Sbjct: 782 GLACECDPQGSLSSVCDPNGGQ-CQCRPNVVGRRCDRCAPGTFGFGPSG---------CK 831
Query: 257 GGRCKCNGHASRCIKSPQGALVCECRHNTAGKDCEKCKPFFSDRPWG 303
C G S G C C + C++C P F WG
Sbjct: 832 PCECHLQGSVSAFCDPITGQ--CHCFQGVYTRQCDRCLPGF----WG 872
Score = 95 (38.5 bits), Expect = 8.9e-14, Sum P(2) = 8.9e-14
Identities = 29/110 (26%), Positives = 44/110 (40%)
Query: 204 CNGHASRCIKSPQGELVCECRHNTAGKDCEKCKPFFSDRPWGRATVYDANECKGGRCKCN 263
CNG +C K+ G+ C C N G++C++C P W A+ C C C+
Sbjct: 1052 CNGSDCQCDKTT-GQ--CLCLPNVIGQNCDRCAP----NTWQLAS---GTGCDP--CSCD 1099
Query: 264 GHASRCIKSPQGALVCECRHNTAGKDCEKCKPFFSDRPWGRATVYDANEC 313
S + C C G+ C +C+ F WG +V + C
Sbjct: 1100 AAHSFGPSCNEFTGQCHCMPGFGGRTCSECQELF----WGDPSV-ECRAC 1144
Score = 90 (36.7 bits), Expect = 2.9e-13, Sum P(2) = 2.9e-13
Identities = 31/108 (28%), Positives = 50/108 (46%)
Query: 199 GGRCK-CNGHASRCIKSPQG---ELV-C-ECRHNTAGKDCEKCKPFFSDRPWGRATVYDA 252
GG C+ C H + P+ E C +C ++T G+ C+ C+ + +G A D
Sbjct: 982 GGTCQPCQCHHNIDTADPEACDKETGRCLKCLYHTEGEHCQLCRFGY----YGDALRQDC 1037
Query: 253 NECKG---GRCK--CNGHASRCIKSPQGALVCECRHNTAGKDCEKCKP 295
+C G + CNG +C K+ G C C N G++C++C P
Sbjct: 1038 RKCVCNYLGTVQEHCNGSDCQCDKTT-GQ--CLCLPNVIGQNCDRCAP 1082
Score = 89 (36.4 bits), Expect = 3.7e-13, Sum P(2) = 3.7e-13
Identities = 33/135 (24%), Positives = 49/135 (36%)
Query: 168 QCKKLYGRTAT--GVISRGNEQEALCTDRHKKQGGRCKCNGHASRCIKSPQGELV--CEC 223
QC K G+ VI + ++ A T + G C+ A+ E C C
Sbjct: 1058 QCDKTTGQCLCLPNVIGQNCDRCAPNTWQLASGTGCDPCSCDAAHSFGPSCNEFTGQCHC 1117
Query: 224 RHNTAGKDCEKCKPFFSDRPWGRATVYDANECKGGRCKCNGHASRCIKSPQGALVCECRH 283
G+ C +C+ F WG +V EC+ C C+ + Q C C
Sbjct: 1118 MPGFGGRTCSECQELF----WGDPSV----ECRA--CDCDPRGIETPQCDQSTGQCVCVE 1167
Query: 284 NTAGKDCEKCKPFFS 298
G C+KC +S
Sbjct: 1168 GVEGPRCDKCTRGYS 1182
Score = 84 (34.6 bits), Expect = 1.2e-12, Sum P(2) = 1.2e-12
Identities = 36/150 (24%), Positives = 58/150 (38%)
Query: 168 QCKKLYGRTATGVISRGNE-QEALCTDRHKKQGGRCKCNGHASRCIKSPQGELVCECRHN 226
QCK Y + I + ++ C + GG C S + + Q C C+
Sbjct: 388 QCKPFYYQHPERDIRDPSLCEQCTCDPAGSQNGGICDSYTDFSAGLIAGQ----CRCKLY 443
Query: 227 TAGKDCEKCKPFFSDRPWGRATVYDANECKGGRCKCNGHASRCIKSPQGALV--CECRHN 284
G+ C+ CK F +G + D CK C CN + +P + C C+
Sbjct: 444 VEGEHCDICKEGF----YG-LSAEDPFGCKS--CACNPLGTIPGGNPCDSETGYCYCKRL 496
Query: 285 TAGKDCEKCKPFFSDRPWGRATVYDANECK 314
G+ C++C P WG + D + C+
Sbjct: 497 VTGQHCDQCLP----EHWGLSN--DLDGCR 520
Score = 82 (33.9 bits), Expect = 2.0e-12, Sum P(2) = 2.0e-12
Identities = 38/151 (25%), Positives = 59/151 (39%)
Query: 169 CKK-LYGRTATGVISRGNE-QEALCTDRHKKQGGRCKCNGHASRCIKSPQG-ELVCECRH 225
C++ L G VI G+ + C D + GR AS C + P +L C C
Sbjct: 907 CERCLAGYYGDPVIGSGDHCRPCPCPDG--PESGR----QFASSCYQDPVSLQLACVCNP 960
Query: 226 NTAGKDCEKCKPFFSDRPWGRATVYDANECKGGRCKCN---GHASRCIKSPQGALVCECR 282
G C++C F P + V C+ +C N C K L +C
Sbjct: 961 GYIGSRCDECASGFFGNP---SDV--GGTCQPCQCHHNIDTADPEACDKETGRCL--KCL 1013
Query: 283 HNTAGKDCEKCKPFFSDRPWGRATVYDANEC 313
++T G+ C+ C+ + +G A D +C
Sbjct: 1014 YHTEGEHCQLCRFGY----YGDALRQDCRKC 1040
Score = 81 (33.6 bits), Expect = 2.5e-12, Sum P(2) = 2.5e-12
Identities = 18/72 (25%), Positives = 30/72 (41%)
Query: 221 CECRHNTAGKDCEKCKPFFSDRPWGRATVYDANECKGGRCKCNGHASRCIKSPQGALVCE 280
C C+ G+ C++C P WG + D + C+ C G + + G C
Sbjct: 491 CYCKRLVTGQHCDQCLP----EHWGLSN--DLDGCRPCDCDIGGALNNSCSAESGQ--CL 542
Query: 281 CRHNTAGKDCEK 292
CR + G+ C +
Sbjct: 543 CRPHMIGRQCSE 554
>RGD|1306311 [details] [associations]
symbol:Lamb1 "laminin, beta 1" species:10116 "Rattus norvegicus"
[GO:0003674 "molecular_function" evidence=ND] [GO:0005178 "integrin
binding" evidence=ISO] [GO:0005201 "extracellular matrix structural
constituent" evidence=ISO] [GO:0005575 "cellular_component"
evidence=ND] [GO:0005578 "proteinaceous extracellular matrix"
evidence=ISO] [GO:0005604 "basement membrane" evidence=ISO]
[GO:0005605 "basal lamina" evidence=ISO] [GO:0005606 "laminin-1
complex" evidence=ISO] [GO:0005607 "laminin-2 complex"
evidence=ISO] [GO:0005615 "extracellular space" evidence=ISO]
[GO:0007162 "negative regulation of cell adhesion" evidence=ISO]
[GO:0007566 "embryo implantation" evidence=ISO] [GO:0008150
"biological_process" evidence=ND] [GO:0016477 "cell migration"
evidence=ISO] [GO:0019899 "enzyme binding" evidence=ISO]
[GO:0030335 "positive regulation of cell migration" evidence=ISO]
[GO:0031012 "extracellular matrix" evidence=IDA] [GO:0031175
"neuron projection development" evidence=ISO] [GO:0034446
"substrate adhesion-dependent cell spreading" evidence=ISO]
[GO:0042476 "odontogenesis" evidence=ISO] [GO:0043208
"glycosphingolipid binding" evidence=ISO] [GO:0043256 "laminin
complex" evidence=ISO] [GO:0043257 "laminin-8 complex"
evidence=ISO] [GO:0043259 "laminin-10 complex" evidence=ISO]
[GO:0048471 "perinuclear region of cytoplasm" evidence=ISO]
[GO:0070062 "extracellular vesicular exosome" evidence=ISO]
RGD:1306311 GO:GO:0048471 GO:GO:0005615 GO:GO:0016477 GO:GO:0007162
GO:GO:0030335 GO:GO:0031012 InterPro:IPR002049 Pfam:PF00053
SMART:SM00180 PROSITE:PS01248 PROSITE:PS50027 GO:GO:0034446
GO:GO:0031175 GO:GO:0042476 GO:GO:0007566 InterPro:IPR009053
SUPFAM:SSF46579 GO:GO:0005201 GO:GO:0043208 InterPro:IPR008211
Pfam:PF00055 SMART:SM00136 PROSITE:PS51117 GO:GO:0005606
GO:GO:0043259 OrthoDB:EOG44BB1B GeneTree:ENSGT00620000087753
InterPro:IPR013015 PROSITE:PS51116 IPI:IPI00365542
Ensembl:ENSRNOT00000008321 UCSC:RGD:1306311 ArrayExpress:D3ZQN7
Uniprot:D3ZQN7
Length = 1834
Score = 234 (87.4 bits), Expect = 5.8e-32, Sum P(2) = 5.8e-32
Identities = 51/132 (38%), Positives = 70/132 (53%)
Query: 200 GRCKCNGHASRCI------KSPQGELV--CECRHNTAGKDCEKCKPFFSDRPWGRATVYD 251
G C C GHAS C + +G + C CRHNT G +CE C F+ D PW A +
Sbjct: 317 GNCFCYGHASECAPVDGFNEEVEGMVHGHCMCRHNTKGLNCELCMDFYHDLPWRPAEGRN 376
Query: 252 ANECKGGRCKCNGHASRC-----IKSPQGAL---VCE-CRHNTAGKDCEKCKPFFSDRPW 302
+N CK +C CN H+S C + G + VC+ C+HNT G++CE+CKPF+ P
Sbjct: 377 SNACK--KCNCNEHSSSCHFDMAVFLATGNVSGGVCDNCQHNTMGRNCEQCKPFYFQHP- 433
Query: 303 GRATVYDANECK 314
+ D N C+
Sbjct: 434 -ERDIRDPNLCE 444
Score = 163 (62.4 bits), Expect = 5.8e-32, Sum P(2) = 5.8e-32
Identities = 49/188 (26%), Positives = 89/188 (47%)
Query: 16 VCGEKIDLNSDPCYENGRPRRCIPDFVNAAFG--QEVKVNSVCGLESPERYCDTSGA--- 70
VC ++ + S C E C P + G Q++ V S CGL PE YC S
Sbjct: 67 VCAQEPEF-SYGCAEGS----CYPATGDLLIGRAQKLSVTSTCGLHKPEPYCIVSHLQED 121
Query: 71 --CHVCDAGSPRGRFPAEYLTDLNNPSNVTCWRSEAQTSVNSLSASP-DNVTLTLSLGKK 127
C +CD+ P + D + NV + + + S + +NVT+ L L +
Sbjct: 122 KKCFICDSRDP---YHETLNPDSHLIENVVTTFAPNRLKIWWQSENGVENVTVQLDLEAE 178
Query: 128 FELTYISLSFCPKSIKPDSLAIYKSQDFGKSWQPLQFYSSQCKKLYGRTATGVISRGNEQ 187
F T++ ++F K+ +P ++ I +S DFGK+W ++++ C+ + +TG + + ++
Sbjct: 179 FHFTHLIMTF--KTFRPAAMLIERSSDFGKTWGVYRYFAYDCESSFPGISTGPMKKVDD- 235
Query: 188 EALCTDRH 195
+C R+
Sbjct: 236 -IICDSRY 242
Score = 148 (57.2 bits), Expect = 4.9e-19, Sum P(2) = 4.9e-19
Identities = 36/117 (30%), Positives = 55/117 (47%)
Query: 201 RCKCNGHASRC-----IKSPQGEL---VCE-CRHNTAGKDCEKCKPFFSDRPWGRATVYD 251
+C CN H+S C + G + VC+ C+HNT G++CE+CKPF+ P + D
Sbjct: 382 KCNCNEHSSSCHFDMAVFLATGNVSGGVCDNCQHNTMGRNCEQCKPFYFQHP--ERDIRD 439
Query: 252 ANECKGGRCK---------CNGHASRCIKSPQGALVCECRHNTAGKDCEKCKPFFSD 299
N C+ C C+G+ + G C C+ + G+ C+ CK F D
Sbjct: 440 PNLCEPCTCDPAGSENGGICDGYTDFSVGLIAGQ--CRCKLHVEGERCDVCKEGFYD 494
Score = 109 (43.4 bits), Expect = 5.6e-15, Sum P(2) = 5.6e-15
Identities = 30/106 (28%), Positives = 42/106 (39%)
Query: 199 GGRCKCNGHAS-RCIKSPQGELVCECRHNTAGKDCEKCKPFFSDRPWGRATVYDANECKG 257
G C+C+ S + P G C+CR N G+ C +C P +G + N CK
Sbjct: 818 GLACECDPQGSLSSVCDPNGGQ-CQCRPNVVGRTCNRCAP----GTFG----FGPNGCKP 868
Query: 258 GRCKCNGHASRCIKSPQGALVCECRHNTAGKDCEKCKPFFSDRPWG 303
C G S + G C C + C++C P F WG
Sbjct: 869 CDCHLQGSVSAFCDAVTGQ--CHCFQGIYARQCDRCLPGF----WG 908
Score = 104 (41.7 bits), Expect = 1.9e-14, Sum P(2) = 1.9e-14
Identities = 27/92 (29%), Positives = 40/92 (43%)
Query: 202 CKCNGHASRCIKSPQGELVCECRHNTAGKDCEKCKPFFSDRPWGRATVYDANECKGGRCK 261
C G S + G+ C C + C++C P F WG + C+ C+
Sbjct: 871 CHLQGSVSAFCDAVTGQ--CHCFQGIYARQCDRCLPGF----WGFPS------CQP--CQ 916
Query: 262 CNGHASRCIKSPQGALVCECRHNTAGKDCEKC 293
CNGHA C + G + C+ T G +CE+C
Sbjct: 917 CNGHAEDC-DTVTGECL-SCQDYTTGHNCERC 946
Score = 103 (41.3 bits), Expect = 2.4e-14, Sum P(2) = 2.4e-14
Identities = 30/110 (27%), Positives = 44/110 (40%)
Query: 204 CNGHASRCIKSPQGELVCECRHNTAGKDCEKCKPFFSDRPWGRATVYDANECKGGRCKCN 263
CNG C K+ G+ C C N G++C++C P W A+ C+ C CN
Sbjct: 1088 CNGSDCHCDKTT-GQ--CSCLPNVIGQNCDRCAP----HTWQLAS---GTGCEP--CNCN 1135
Query: 264 GHASRCIKSPQGALVCECRHNTAGKDCEKCKPFFSDRPWGRATVYDANEC 313
S + C+C G+ C +C+ F WG V + C
Sbjct: 1136 AVHSFGPSCNEFTGQCQCMPGFGGRTCSECQELF----WGDPDV-ECRAC 1180
Score = 100 (40.3 bits), Expect = 4.8e-14, Sum P(2) = 4.8e-14
Identities = 38/150 (25%), Positives = 60/150 (40%)
Query: 168 QCKKLYGRTATGVISRGNEQE-ALCTDRHKKQGGRCKCNGHASRCIKSPQGELVCECRHN 226
QCK Y + I N E C + GG C +G+ + G+ C C+ +
Sbjct: 424 QCKPFYFQHPERDIRDPNLCEPCTCDPAGSENGGIC--DGYTDFSVGLIAGQ--CRCKLH 479
Query: 227 TAGKDCEKCKPFFSDRPWGRATVYDANECKGGRCKCNGHASRCIKSPQGALV--CECRHN 284
G+ C+ CK F D + D CK C CN + +P + C C+
Sbjct: 480 VEGERCDVCKEGFYD-----LSAEDPFGCKS--CACNPLGTIPGGNPCDSETGYCYCKRL 532
Query: 285 TAGKDCEKCKPFFSDRPWGRATVYDANECK 314
G+ C++C P + WG + D + C+
Sbjct: 533 VTGQRCDQCLP----QHWGLSN--DLDGCR 556
Score = 92 (37.4 bits), Expect = 3.3e-13, Sum P(2) = 3.3e-13
Identities = 27/103 (26%), Positives = 38/103 (36%)
Query: 199 GGRCK-CNGHASRCIKSPQGELV--CECRHNTAGKDCEKCKPFFSDRPWGRATVYDANEC 255
G C+ CN +A E C+C G+ C +C+ F WG V EC
Sbjct: 1126 GTGCEPCNCNAVHSFGPSCNEFTGQCQCMPGFGGRTCSECQELF----WGDPDV----EC 1177
Query: 256 KGGRCKCNGHASRCIKSPQGALVCECRHNTAGKDCEKCKPFFS 298
+ C C+ + Q C C G C+KC +S
Sbjct: 1178 RA--CDCDPRGIETPQCDQSTGQCVCVEGVEGPRCDKCTRGYS 1218
Score = 92 (37.4 bits), Expect = 3.3e-13, Sum P(2) = 3.3e-13
Identities = 31/108 (28%), Positives = 47/108 (43%)
Query: 199 GGRCK-CNGHASRCIKSPQG---ELV-C-ECRHNTAGKDCEKCKPFFSDRPWGRATVYDA 252
GG C+ C H + P+ E C +C ++T G C+ C+ + +G A D
Sbjct: 1018 GGSCQPCQCHHNIDTTDPEACDKETGRCLKCLYHTEGDHCQFCQHGY----YGDALRQDC 1073
Query: 253 NECKGG-----RCKCNGHASRCIKSPQGALVCECRHNTAGKDCEKCKP 295
+C R CNG C K+ G C C N G++C++C P
Sbjct: 1074 RKCVCNYLGTVREHCNGSDCHCDKTT-GQ--CSCLPNVIGQNCDRCAP 1118
Score = 62 (26.9 bits), Expect = 4.2e-10, Sum P(2) = 4.2e-10
Identities = 25/110 (22%), Positives = 44/110 (40%)
Query: 208 ASRCIKSPQG-ELVCECRHNTAGKDCEKCKPFFSDRPWGRATVYDANECKGGRCKCNGHA 266
A C + P +L C C G C+ C + +G + + + C+ +C N
Sbjct: 978 ARSCYQDPVTLQLACVCDPGYIGSRCDGCASGY----FGNPSDFGGS-CQPCQCHHNIDT 1032
Query: 267 S---RCIKSPQGALVCECRHNTAGKDCEKCKPFFSDRPWGRATVYDANEC 313
+ C K L +C ++T G C+ C+ + +G A D +C
Sbjct: 1033 TDPEACDKETGRCL--KCLYHTEGDHCQFCQHGY----YGDALRQDCRKC 1076
>ZFIN|ZDB-GENE-021226-1 [details] [associations]
symbol:lamb1a "laminin, beta 1a" species:7955 "Danio
rerio" [GO:0007634 "optokinetic behavior" evidence=IMP] [GO:0050908
"detection of light stimulus involved in visual perception"
evidence=IMP] [GO:0007517 "muscle organ development" evidence=IMP]
[GO:0031290 "retinal ganglion cell axon guidance" evidence=IMP]
ZFIN:ZDB-GENE-021226-1 GO:GO:0048471 InterPro:IPR013032
PROSITE:PS00022 GO:GO:0007517 InterPro:IPR002049 Pfam:PF00053
SMART:SM00180 PROSITE:PS01248 PROSITE:PS50027 HSSP:P02468
GO:GO:0050908 GO:GO:0031290 InterPro:IPR008211 Pfam:PF00055
SMART:SM00136 PROSITE:PS51117 GO:GO:0007634 HOGENOM:HOG000007552
KO:K05636 InterPro:IPR013015 PROSITE:PS51116 HOVERGEN:HBG052301
EMBL:AF468049 IPI:IPI00485526 RefSeq:NP_775382.1 UniGene:Dr.76526
ProteinModelPortal:Q8JHV7 STRING:Q8JHV7 PRIDE:Q8JHV7 GeneID:286830
KEGG:dre:286830 CTD:286830 NextBio:20806481 Bgee:Q8JHV7
Uniprot:Q8JHV7
Length = 1785
Score = 239 (89.2 bits), Expect = 1.4e-31, Sum P(2) = 1.4e-31
Identities = 52/132 (39%), Positives = 67/132 (50%)
Query: 200 GRCKCNGHASRCIK-SPQGELV-------CECRHNTAGKDCEKCKPFFSDRPWGRATVYD 251
G C C GHAS C GE V C C HNT G +CE+C+ F+ D PW A +
Sbjct: 266 GNCFCYGHASECAPVDGTGEAVEGMVHGHCMCNHNTIGLNCERCQDFYHDLPWRPAEGRN 325
Query: 252 ANECKGGRCKCNGHASRC-----IKSPQGAL---VCE-CRHNTAGKDCEKCKPFFSDRPW 302
N CK +C CN H+ C + G + VC+ C+HNT G +CE+CKPFF P
Sbjct: 326 TNACK--KCHCNHHSHSCHFDMAVYRASGNVSGGVCDDCQHNTMGHNCEQCKPFFHQHP- 382
Query: 303 GRATVYDANECK 314
+ D N C+
Sbjct: 383 -EKDIRDPNICE 393
Score = 154 (59.3 bits), Expect = 1.4e-31, Sum P(2) = 1.4e-31
Identities = 48/199 (24%), Positives = 90/199 (45%)
Query: 4 LKLLCVPLLIGAVCGEKIDLNSDPCYENGRPRRCIPDFVNAAFG--QEVKVNSVCGLESP 61
L+L + +L GA + D C E C P + G Q++ S CG+ P
Sbjct: 3 LQLAALSIL-GAWALADVPELGDVCTEGS----CYPATGDLLIGRAQQLLATSTCGVHKP 57
Query: 62 ERYCDTSGA-----CHVCDAGSPRGRFPAEYLTDLNNPSNVTCWRSEAQTSVNSLSASPD 116
E +C S C VCD+ A +T + + VT + + +
Sbjct: 58 EPFCIVSHLQEEKKCFVCDSRQAYNE-TAHQVTSHSIENVVTTFAPNRLKTWWQSENGLE 116
Query: 117 NVTLTLSLGKKFELTYISLSFCPKSIKPDSLAIYKSQDFGKSWQPLQFYSSQCKKLYGRT 176
NVT+ L L +F T++ ++F K+ +P ++ I +S DFG +WQ ++++ C+ +
Sbjct: 117 NVTIQLDLEAEFHFTHLIMTF--KTFRPAAMVIERSADFGNTWQVYRYFAYDCESSFPSV 174
Query: 177 ATGVISRGNEQEALCTDRH 195
+ G +++ ++ +C R+
Sbjct: 175 SHGPMTKVDD--VICDTRY 191
Score = 150 (57.9 bits), Expect = 3.2e-18, Sum P(2) = 3.2e-18
Identities = 35/110 (31%), Positives = 52/110 (47%)
Query: 201 RCKCNGHASRC-----IKSPQGEL---VCE-CRHNTAGKDCEKCKPFFSDRPWGRATVYD 251
+C CN H+ C + G + VC+ C+HNT G +CE+CKPFF P + D
Sbjct: 331 KCHCNHHSHSCHFDMAVYRASGNVSGGVCDDCQHNTMGHNCEQCKPFFHQHP--EKDIRD 388
Query: 252 ANECKGGRCKCNGHASRCIKSPQG----ALV---CECRHNTAGKDCEKCK 294
N C+ C G + + P L+ C C+ N G+ C++CK
Sbjct: 389 PNICEPCNCDPVGSLNGGVCDPMTDVSLGLISGQCRCKPNVEGERCDQCK 438
Score = 136 (52.9 bits), Expect = 9.2e-17, Sum P(2) = 9.2e-17
Identities = 36/115 (31%), Positives = 50/115 (43%)
Query: 180 VISRGNEQEALCTDRHKKQGGR-CKCNGHASRCIKSPQGELVCECRHNTAGKDCEKCKPF 238
V+ R ++ A T QG R C C+ S + CEC G+ C++C P
Sbjct: 794 VVGRNCDRCAPATFLFXPQGCRPCDCSPEGSVHSYCHEATGQCECIAGAYGRQCDRCLPG 853
Query: 239 FSDRPWGRATVYDANECKGGRCKCNGHASRCIKSPQGALVCECRHNTAGKDCEKC 293
+ WG C+ C CNGHA +C PQ CR +T G +CE+C
Sbjct: 854 Y----WGFPN------CRP--CTCNGHAEQC--DPQTGQCLSCRDHTTGHNCERC 894
Score = 107 (42.7 bits), Expect = 9.5e-14, Sum P(2) = 9.5e-14
Identities = 31/109 (28%), Positives = 45/109 (41%)
Query: 198 QGGR-CKCNGHAS-RCIKSPQGELVCECRHNTAGKDCEKCKPF-FSDRPWGRATVYDANE 254
QG + C+C+ S + P G C+CR N G++C++C P F P G
Sbjct: 764 QGVKACQCDPQGSLSTVCDPSGGQ-CQCRPNVVGRNCDRCAPATFLFXPQG--------- 813
Query: 255 CKGGRCKCNGHASRCIKSPQGALVCECRHNTAGKDCEKCKPFFSDRPWG 303
C+ C G G CEC G+ C++C P + WG
Sbjct: 814 CRPCDCSPEGSVHSYCHEATGQ--CECIAGAYGRQCDRCLPGY----WG 856
Score = 102 (41.0 bits), Expect = 3.1e-13, Sum P(2) = 3.1e-13
Identities = 30/108 (27%), Positives = 45/108 (41%)
Query: 211 CIKSPQGELV-CECRHNTAGKDCEKCKPFFSDRPWGRATVYDANECKGGRCKCNGHAS-- 267
C KSP V C C G CE+C P + P V EC+ C+CN +
Sbjct: 929 CYKSPDSSQVFCVCNQGYKGARCEECAPGYYGNPH---EV--GGECRP--CQCNSNIDMM 981
Query: 268 --RCIKSPQGALVCECRHNTAGKDCEKCKPFFSDRPWGRATVYDANEC 313
+ GA V +C ++T G+ C +C+ + +G A +C
Sbjct: 982 DPESCDARTGACV-KCLYHTEGESCNRCRLGY----YGNALTQSCRKC 1024
Score = 93 (37.8 bits), Expect = 2.7e-12, Sum P(2) = 2.7e-12
Identities = 27/95 (28%), Positives = 44/95 (46%)
Query: 221 CECRHNTAGKDCEKCKPFFSDRPWGRATVYDANECKGGRCKCN-GHASRCIKSPQGALVC 279
C C+ G++C++C P + WG + D + C+ C C+ G A SP C
Sbjct: 475 CYCKRLVTGRNCDQCLP----QHWGLSN--DMDGCRP--CDCDHGGAINNNCSPVSGQ-C 525
Query: 280 ECRHNTAGKDCEKCKPFFSDRPWGRATVYDANECK 314
+CR + G+ C++ + F T Y+A E K
Sbjct: 526 QCREHMFGRRCDQVESGFYFIALDHYT-YEAEEAK 559
Score = 90 (36.7 bits), Expect = 5.5e-12, Sum P(2) = 5.5e-12
Identities = 32/116 (27%), Positives = 43/116 (37%)
Query: 201 RCKCN--GHASRCIKSPQG---ELV---CECRHNTAGKDCEKCKPFFSDRPWGRATVYDA 252
+C CN G SP +L C C N G+ C++C P D W A+
Sbjct: 1023 KCVCNQMGTVEEMCPSPGNCNCDLTSGQCLCLPNVVGQHCDQCAP---DT-WNMASGKGC 1078
Query: 253 NECKGGRCKCN-GHASRCIKSPQGALVCECRHNTAGKDCEKCKPFFSDRPWGRATV 307
+C C N S C G C C+ G+ C +C+ F WG V
Sbjct: 1079 EDCD---CDPNHSFGSSC-NEIMGQ--CSCKPGFGGRTCRECRELF----WGNPEV 1124
Score = 89 (36.4 bits), Expect = 6.9e-12, Sum P(2) = 6.9e-12
Identities = 26/106 (24%), Positives = 42/106 (39%)
Query: 202 CKCN-GHA--SRCIKSPQGELVCECRHNTAGKDCEKCKPFFSDRPWGRATVYDANECKGG 258
C C+ H+ S C G+ C C+ G+ C +C+ F P + D +
Sbjct: 1081 CDCDPNHSFGSSC-NEIMGQ--CSCKPGFGGRTCRECRELFWGNPEVKCHACDCDPRGIA 1137
Query: 259 RCKCN---GHASRCIKSPQGALVCECRHNTAGK--DCEKCKPFFSD 299
+CN GH C++ G C G+ CE+C F++
Sbjct: 1138 EQQCNKVTGHCV-CVEGVSGPRCDTCARGYTGEFPQCERCHQCFAE 1182
Score = 85 (35.0 bits), Expect = 1.8e-11, Sum P(2) = 1.8e-11
Identities = 38/150 (25%), Positives = 59/150 (39%)
Query: 168 QCKKLYGRTATGVISRGNEQEAL-CTDRHKKQGGRCKCNGHASRCIKSPQGELVCECRHN 226
QCK + + I N E C GG C S + S Q C C+ N
Sbjct: 373 QCKPFFHQHPEKDIRDPNICEPCNCDPVGSLNGGVCDPMTDVSLGLISGQ----CRCKPN 428
Query: 227 TAGKDCEKCKPFFSDRPWGRATVYDANECKGGRCKCNGHASRCIKSP--QGALVCECRHN 284
G+ C++CK +G + D C+ C CN + SP + C C+
Sbjct: 429 VEGERCDQCK----QGHYGLSE--DPLGCQP--CTCNALGTVPGGSPCDTDSGNCYCKRL 480
Query: 285 TAGKDCEKCKPFFSDRPWGRATVYDANECK 314
G++C++C P + WG + D + C+
Sbjct: 481 VTGRNCDQCLP----QHWGLSN--DMDGCR 504
Score = 68 (29.0 bits), Expect = 1.0e-09, Sum P(2) = 1.0e-09
Identities = 23/78 (29%), Positives = 29/78 (37%)
Query: 221 CECRHNTAGKDCEKCKPFFSDRPWGRATV---YDANECKGGRCKCNGHASRCIKSPQ-GA 276
C C N G+ C++C P + G+ D N G CN +C P G
Sbjct: 1051 CLCLPNVVGQHCDQCAPDTWNMASGKGCEDCDCDPNHSFGS--SCNEIMGQCSCKPGFGG 1108
Query: 277 LVC-ECRHNTAGKDCEKC 293
C ECR G KC
Sbjct: 1109 RTCRECRELFWGNPEVKC 1126
Score = 41 (19.5 bits), Expect = 6.2e-07, Sum P(2) = 6.2e-07
Identities = 14/68 (20%), Positives = 23/68 (33%)
Query: 245 GRATVYDANECKGGRCKCNGHASRCIKSPQGALVC---ECRHNTAGKDCEKCKPFFSDRP 301
G+ D +E C + C S G L C + G+ C+ +
Sbjct: 1380 GQLETLDLSELSEKTCGSPAGSENCADSRCGGLSCVDMQGSRKCGGEGCDGLTTL-AHNA 1438
Query: 302 WGRATVYD 309
W +A +D
Sbjct: 1439 WQKAKDFD 1446
>ZFIN|ZDB-GENE-030131-9823 [details] [associations]
symbol:lama5 "laminin, alpha 5" species:7955
"Danio rerio" [GO:0030155 "regulation of cell adhesion"
evidence=IEA] [GO:0005102 "receptor binding" evidence=IEA]
[GO:0007155 "cell adhesion" evidence=IEA] [GO:0030334 "regulation
of cell migration" evidence=IEA] [GO:0005604 "basement membrane"
evidence=IEA] [GO:0045995 "regulation of embryonic development"
evidence=IEA] [GO:0005606 "laminin-1 complex" evidence=IEA]
[GO:0033333 "fin development" evidence=IMP] [GO:0008104 "protein
localization" evidence=IMP] [GO:0035141 "medial fin morphogenesis"
evidence=IMP] [GO:0016337 "cell-cell adhesion" evidence=IMP]
[GO:0035138 "pectoral fin morphogenesis" evidence=IMP] [GO:0033334
"fin morphogenesis" evidence=IMP] InterPro:IPR000742
InterPro:IPR009254 InterPro:IPR010307 Pfam:PF06008 Pfam:PF06009
PROSITE:PS50026 ZFIN:ZDB-GENE-030131-9823 GO:GO:0008104
GO:GO:0030155 InterPro:IPR013032 PROSITE:PS00022
Gene3D:2.60.120.200 InterPro:IPR008985 InterPro:IPR013320
SUPFAM:SSF49899 GO:GO:0030334 GO:GO:0016337 InterPro:IPR002049
InterPro:IPR001791 Pfam:PF00053 Pfam:PF00054 SMART:SM00180
SMART:SM00282 PROSITE:PS01248 PROSITE:PS50027 PROSITE:PS50025
Pfam:PF02210 GO:GO:0045995 InterPro:IPR018031 InterPro:IPR000034
InterPro:IPR008211 Pfam:PF00052 Pfam:PF00055 SMART:SM00281
SMART:SM00136 PROSITE:PS51115 PROSITE:PS51117 GO:GO:0005606
eggNOG:COG0419 HOVERGEN:HBG052300 KO:K06240 CTD:3911
OrthoDB:EOG4VHK5G GO:GO:0035138 EMBL:DQ232730 IPI:IPI00734953
RefSeq:NP_001034260.1 UniGene:Dr.12091 ProteinModelPortal:Q2Q1W5
STRING:Q2Q1W5 PRIDE:Q2Q1W5 GeneID:321243 KEGG:dre:321243
NextBio:20807298 ArrayExpress:Q2Q1W5 Bgee:Q2Q1W5 GO:GO:0035141
Uniprot:Q2Q1W5
Length = 3664
Score = 243 (90.6 bits), Expect = 2.2e-31, Sum P(2) = 2.2e-31
Identities = 50/122 (40%), Positives = 65/122 (53%)
Query: 199 GGRCKCNGHASRC-IKSPQG--ELVCECRHNTAGKDCEKCKPFFSDRPWGRATVYDANEC 255
GGRC CNGHA C + P +L C+C+HNT G C+ C P F+ PW AT Y ANEC
Sbjct: 289 GGRCVCNGHAEACNAQDPNDPYKLQCDCQHNTCGTSCDGCCPGFNQFPWKPATTYSANEC 348
Query: 256 KGGRCKCNGHASRCIKSPQ---------------GALVC-ECRHNTAGKDCEKCKPFFSD 299
+ C C+ H+S C P+ G VC EC+H+T G +CE+C P +
Sbjct: 349 EP--CNCHRHSSECYYDPEIDQRRSSLDMQGEYNGGGVCVECQHHTTGVNCERCIPGYYR 406
Query: 300 RP 301
P
Sbjct: 407 SP 408
Score = 175 (66.7 bits), Expect = 1.5e-20, Sum P(2) = 1.5e-20
Identities = 31/61 (50%), Positives = 37/61 (60%)
Query: 257 GGRCKCNGHASRC-IKSPQGA--LVCECRHNTAGKDCEKCKPFFSDRPWGRATVYDANEC 313
GGRC CNGHA C + P L C+C+HNT G C+ C P F+ PW AT Y ANEC
Sbjct: 289 GGRCVCNGHAEACNAQDPNDPYKLQCDCQHNTCGTSCDGCCPGFNQFPWKPATTYSANEC 348
Query: 314 K 314
+
Sbjct: 349 E 349
Score = 169 (64.5 bits), Expect = 7.9e-20, Sum P(2) = 7.9e-20
Identities = 39/107 (36%), Positives = 49/107 (45%)
Query: 202 CKCNGHASRCIKSPQGELVC-ECRHNTAGKDCEKCKPFFSDRPWGRATVYDANECKGGRC 260
C CNGH+ +C+ G +C CRHNTAG CEKC F TV D + C
Sbjct: 1843 CNCNGHSDQCL---DGSGICVNCRHNTAGNHCEKCLGGFHHNN----TV-DGHSVSCSSC 1894
Query: 261 KC------NGHASRCIKSPQGALVCECRHNTAGKDCEKCKPFFSDRP 301
C N A RC++ P + C C AG CE+C P + P
Sbjct: 1895 PCPLQVASNNFAIRCVEKPNN-MRCLCMPGYAGSKCERCAPGYYGNP 1940
Score = 155 (59.6 bits), Expect = 2.2e-31, Sum P(2) = 2.2e-31
Identities = 58/210 (27%), Positives = 96/210 (45%)
Query: 3 FLKLLCVPLLIGAVCGEKIDLNSDPCYENGRPRRCIPDFVNAAFGQEVKVNSVCGLESPE 62
FL LL LL G + +++ +N NG P + N A G ++ + CG++ E
Sbjct: 17 FLPLL---LLTGTLTAQELPVNG----VNGFSLH--PPYFNLAEGTKITATATCGVDENE 67
Query: 63 R-----YCDTSGACHVCDAGSPRGRFPAEYLT-----DLN--NPSNVTCWRSEA--QTSV 108
+ YC G V +G P +Y D N +P + +E Q+
Sbjct: 68 QPIQDLYCKLVGG-PV--SGDPSQTIQGQYCDICSSQDTNRAHPISNAIDGTERWWQSPP 124
Query: 109 NSLSASPDNVTLTLSLGKKFELTYISLSFCPKSIKPDSLAIYKSQDFGKSWQPLQFYSSQ 168
S SA + V +TL LG+ F + Y+ + F S +PD + +S DFGK++QP QF++S
Sbjct: 125 LSRSAKHNQVNVTLDLGQLFHVAYVLIKFA-NSPRPDLWVLERSIDFGKTYQPWQFFASS 183
Query: 169 CKKLYGRTATGVISR-GNEQEALCTDRHKK 197
+ R I R ++ + +CT + +
Sbjct: 184 KRDCIERFGQRTIERIYHDDDVICTTEYSR 213
Score = 140 (54.3 bits), Expect = 1.2e-16, Sum P(2) = 1.2e-16
Identities = 39/118 (33%), Positives = 51/118 (43%)
Query: 193 DRHKKQGGRCKC------NGHASRCIKSPQGELVCECRHNTAGKDCEKCKPFFSDRPWGR 246
D H C C N A RC++ P + C C AG CE+C P + P
Sbjct: 1885 DGHSVSCSSCPCPLQVASNNFAIRCVEKPNN-MRCLCMPGYAGSKCERCAPGYYGNP--- 1940
Query: 247 ATVYDANECKGGRCKCNGHAS-RCIKSPQGALVCECR---HNTAGKDCEKCKP-FFSD 299
V + C+ C CNG++ + S L EC+ HNTAG CE C P F+ D
Sbjct: 1941 --VVIGSTCQP--CNCNGNSDPNMLFSDCHPLTGECQSCMHNTAGPHCEICAPGFYGD 1994
Score = 137 (53.3 bits), Expect = 2.6e-16, Sum P(2) = 2.6e-16
Identities = 29/76 (38%), Positives = 42/76 (55%)
Query: 220 VCECRHNTAGKDCEKCKP-FFSDRPWGRATVYDANECKGGRCKCNGHASRCIKSPQGALV 278
+C C N G C++C P ++ D G ++ +C C CNGH+ +C+ G+ +
Sbjct: 1809 ICLCPGNYLGDSCQQCAPGYYRDNK-G---LF-LGKCVP--CNCNGHSDQCL---DGSGI 1858
Query: 279 C-ECRHNTAGKDCEKC 293
C CRHNTAG CEKC
Sbjct: 1859 CVNCRHNTAGNHCEKC 1874
Score = 127 (49.8 bits), Expect = 2.8e-15, Sum P(2) = 2.8e-15
Identities = 36/104 (34%), Positives = 46/104 (44%)
Query: 202 CKCNGHAS-RCIKSPQGELVCECR---HNTAGKDCEKCKP-FFSDRPWGR-ATVYDANEC 255
C CNG++ + S L EC+ HNTAG CE C P F+ D + T + + C
Sbjct: 1950 CNCNGNSDPNMLFSDCHPLTGECQSCMHNTAGPHCEICAPGFYGDAITAKNCTRCNCSPC 2009
Query: 256 KGGRCKCNGHASRCIKSPQ--GALVCECRHNTAGKD----CEKC 293
G C+ H +C P GA C H T G D C KC
Sbjct: 2010 --GTAHCDSHTGQCHCKPGVVGAQCDRCEHGTFGFDSCTGCRKC 2051
Score = 110 (43.8 bits), Expect = 1.6e-13, Sum P(2) = 1.6e-13
Identities = 32/116 (27%), Positives = 49/116 (42%)
Query: 202 CKCNGHASRCIKSP-----------QGEL----VC-ECRHNTAGKDCEKCKPFFSDRPWG 245
C C+ H+S C P QGE VC EC+H+T G +CE+C P + P
Sbjct: 351 CNCHRHSSECYYDPEIDQRRSSLDMQGEYNGGGVCVECQHHTTGVNCERCIPGYYRSP-- 408
Query: 246 RATVYDANECKGGRCKCNGHASRCIKSPQGALVCECRHNTAGKDCEKCKPFFSDRP 301
+ C +C+ C + G C C+ N G++C++C + P
Sbjct: 409 DHPLESPFACSKCQCESEFTEGTC-EDRTGR--CYCKPNYTGENCDQCAEGYEHFP 461
Score = 104 (41.7 bits), Expect = 6.8e-13, Sum P(2) = 6.8e-13
Identities = 31/104 (29%), Positives = 39/104 (37%)
Query: 198 QGGRCKCNGHASRCIKSPQGELVCECRHNTAGKDCEKCKPFFSDRPWGRA--TVYDANEC 255
Q G C G I G C CR G CE+CKP + W + T+Y + C
Sbjct: 709 QLGTCNPAGSVHNDILPTVGS--CVCRPYVEGVACERCKPLY----WNLSPDTIYGCSTC 762
Query: 256 KGGRCKCNGHASRCIKSPQGALVCECRHNTAGKDCEKCKP-FFS 298
C G S + Q C C+ N C CK FF+
Sbjct: 763 D---CNTAGTLSEVAECTQRTGQCFCKPNVCSGTCNVCKDGFFN 803
Score = 102 (41.0 bits), Expect = 1.1e-12, Sum P(2) = 1.1e-12
Identities = 27/95 (28%), Positives = 38/95 (40%)
Query: 202 CKCN--GHASRCIKSPQGELVCECRHNTAGKDCEKCKPFFSDRPWGRATVYDANECKGGR 259
C C+ G S I C CR+N G+ C++C P F P R + NE
Sbjct: 1511 CNCSRPGVTSMDISCDTNNGQCRCRNNIVGRQCDRCFPGFYGYPNCRPC--NCNEAGTEM 1568
Query: 260 CKCNGHASRCIKSPQGALVCECRHNTAGKDCEKCK 294
C+ RC+ C+ N G C++CK
Sbjct: 1569 NVCDSFTGRCL----------CKENVEGPRCDQCK 1593
Score = 102 (41.0 bits), Expect = 1.1e-12, Sum P(2) = 1.1e-12
Identities = 32/114 (28%), Positives = 42/114 (36%)
Query: 202 CKCNGHASRCIKSPQGELVCECRHNTAGKDCEKCKPFFSDRPWGRATVYDANECKGGRCK 261
C C+ SR C C N G+ C+ C P G Y C+ G C
Sbjct: 665 CDCSVEGSRSSSCDPVSGQCVCLPNIEGQRCDSCSP-------GS---YGFPLCQLGTCN 714
Query: 262 CNGHASRCIKSPQGALVCECRHNTAGKDCEKCKPFFSDRPWGRA--TVYDANEC 313
G I G+ C CR G CE+CKP + W + T+Y + C
Sbjct: 715 PAGSVHNDILPTVGS--CVCRPYVEGVACERCKPLY----WNLSPDTIYGCSTC 762
Score = 99 (39.9 bits), Expect = 2.2e-12, Sum P(2) = 2.2e-12
Identities = 25/93 (26%), Positives = 37/93 (39%)
Query: 201 RCKCNGHASRCIKSPQGELVCECRHNTAGKDCEKCKPFFSDRPWGRATVYDANECKGGRC 260
+C C+ A+ C C+ G +C +C P W Y +N C+ +C
Sbjct: 2050 KCDCDASAALVQACDPVNGACACQPGVNGPNCHQCAPGH----WN----YSSNGCR--KC 2099
Query: 261 KCNGHASRCIKSPQGALVCECRHNTAGKDCEKC 293
+C G RC P+ C C GK C+ C
Sbjct: 2100 ECKG--GRC--DPRTG-ECRCTTGLTGKQCDTC 2127
Score = 96 (38.9 bits), Expect = 4.6e-12, Sum P(2) = 4.6e-12
Identities = 27/105 (25%), Positives = 43/105 (40%)
Query: 202 CKCNG---HASRCIKSPQGELVCECRHNTAGKDCEKCKPFFSDRPWGRATVYDANECKGG 258
C+CN + C P+ C C+ G+ C+ C + + N C+
Sbjct: 482 CECNAAGTEGNSCRPDPRTN-TCVCKPEFTGEHCDTCSHGY----------FSIN-CQ-- 527
Query: 259 RCKCNGHASRCIKSPQGALV--CECRHNTAGKDCEKCKPFFSDRP 301
RC+C+G C+ A+ C CR G CE+C P + + P
Sbjct: 528 RCQCSGQG--CLDGSCDAVTGQCVCRSGFQGYSCEQCAPGYFNYP 570
Score = 93 (37.8 bits), Expect = 9.4e-12, Sum P(2) = 9.4e-12
Identities = 27/102 (26%), Positives = 40/102 (39%)
Query: 202 CKCN--GHASRCIKSPQGELVCECRHNTAGKDCEKCKPFFSDRPWGRATVYDANECKGGR 259
C CN G S + Q C C+ N C CK F + + + + C+G +
Sbjct: 762 CDCNTAGTLSEVAECTQRTGQCFCKPNVCSGTCNVCKDGFFNLQ--KDSYFG---CQGCQ 816
Query: 260 CKCNGHASRCIKSPQGALVCECRHNTAGKDCEKCKP--FFSD 299
C G + G C CR N G C++ +P +F D
Sbjct: 817 CDIGGSVGQACDERYGR--CRCRPNVEGPKCKQPRPDHYFPD 856
Score = 88 (36.0 bits), Expect = 3.1e-11, Sum P(2) = 3.1e-11
Identities = 25/98 (25%), Positives = 40/98 (40%)
Query: 201 RCKCNGHASRCIKSPQGELVCECRHNTAGKDCEKCKPFFSDRPWGRATVYDANECKGGR- 259
RC C+ + S G+ C C+ G C++C+ T + + C G R
Sbjct: 2003 RCNCSPCGTAHCDSHTGQ--CHCKPGVVGAQCDRCE---------HGT-FGFDSCTGCRK 2050
Query: 260 CKCNGHAS--RCIKSPQGALVCECRHNTAGKDCEKCKP 295
C C+ A+ + GA C C+ G +C +C P
Sbjct: 2051 CDCDASAALVQACDPVNGA--CACQPGVNGPNCHQCAP 2086
Score = 79 (32.9 bits), Expect = 2.6e-10, Sum P(2) = 2.6e-10
Identities = 30/117 (25%), Positives = 41/117 (35%)
Query: 191 CTDRHKKQGGRCKCNGHASRCIKSPQ--GELVCECRHNTAGKD-CEKCKPFFSDRPWGRA 247
CT + G C+ H +C P G C H T G D C C+ D A
Sbjct: 2001 CTRCNCSPCGTAHCDSHTGQCHCKPGVVGAQCDRCEHGTFGFDSCTGCRKCDCD---ASA 2057
Query: 248 TVYDANECKGGRCKC----NG-HASRCIK-----SPQGALVCECRHNTAGKDCEKCK 294
+ A + G C C NG + +C S G CEC+ +C+
Sbjct: 2058 ALVQACDPVNGACACQPGVNGPNCHQCAPGHWNYSSNGCRKCECKGGRCDPRTGECR 2114
Score = 78 (32.5 bits), Expect = 3.3e-10, Sum P(2) = 3.3e-10
Identities = 25/88 (28%), Positives = 35/88 (39%)
Query: 215 PQGELVCECRHNTAGKDCEKCKPFFSDRPWGRATVYDANECKGGRCKCNGHASRCIKSPQ 274
P G C CR G C++C+ F P C+ C C+ S + S
Sbjct: 589 PAGR--CLCRPEFTGPRCDQCQSGFHSYP----------NCQV--CTCDPRTS--LDSSC 632
Query: 275 GAL-VCECRHNTAGKDCEKCKPFFSDRP 301
L C CR N +G C++C P + P
Sbjct: 633 SELDQCNCRPNYSGPRCQQCAPGYYSYP 660
Score = 51 (23.0 bits), Expect = 2.0e-07, Sum P(2) = 2.0e-07
Identities = 8/23 (34%), Positives = 13/23 (56%)
Query: 278 VCECRHNTAGKDCEKCKP-FFSD 299
+C C N G C++C P ++ D
Sbjct: 1809 ICLCPGNYLGDSCQQCAPGYYRD 1831
Score = 50 (22.7 bits), Expect = 6.2e-09, Sum P(2) = 6.2e-09
Identities = 20/70 (28%), Positives = 27/70 (38%)
Query: 8 CVPLL-IGAVCGEKIDLNSDPCYENGRPRRCIPDFVNAAFGQEVKVNSVCGLE-SPERYC 65
C P + + C E N P Y R ++C P + + C +E S C
Sbjct: 622 CDPRTSLDSSCSELDQCNCRPNYSGPRCQQCAPGY----YSYPSCTPCDCSVEGSRSSSC 677
Query: 66 D-TSGACHVC 74
D SG C VC
Sbjct: 678 DPVSGQC-VC 686
Score = 47 (21.6 bits), Expect = 1.3e-08, Sum P(2) = 1.3e-08
Identities = 12/31 (38%), Positives = 16/31 (51%)
Query: 14 GAV-CG-EKIDLNSDPCYENGRPRRCIPDFV 42
GAV CG ++ SD C G RC P+ +
Sbjct: 1417 GAVPCGCHEVGAESDTCESFGGQCRCRPNVI 1447
Score = 40 (19.1 bits), Expect = 6.6e-08, Sum P(2) = 6.6e-08
Identities = 22/77 (28%), Positives = 31/77 (40%)
Query: 7 LCVPLLIGAVCGEKIDLNSDPCYENGRPRR---CIPDFVNAAFGQEVKVNSVCGLESPER 63
+C P + G C E+ P Y N P C N A G +V + C + +
Sbjct: 731 VCRPYVEGVAC-ERCK----PLYWNLSPDTIYGCSTCDCNTA-GTLSEV-AECTQRTGQC 783
Query: 64 YCDT---SGACHVCDAG 77
+C SG C+VC G
Sbjct: 784 FCKPNVCSGTCNVCKDG 800
>UNIPROTKB|F1S575 [details] [associations]
symbol:NTNG2 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0046658 "anchored to plasma membrane" evidence=IEA]
[GO:0007409 "axonogenesis" evidence=IEA] InterPro:IPR000742
PROSITE:PS50026 SMART:SM00181 InterPro:IPR013032 PROSITE:PS00022
InterPro:IPR002049 Pfam:PF00053 SMART:SM00180 PROSITE:PS01248
PROSITE:PS50027 InterPro:IPR008211 Pfam:PF00055 SMART:SM00136
PROSITE:PS51117 GeneTree:ENSGT00700000104042 OMA:YCECFGH
EMBL:CU179665 EMBL:CU407227 Ensembl:ENSSSCT00000007505
Uniprot:F1S575
Length = 469
Score = 228 (85.3 bits), Expect = 2.4e-31, Sum P(2) = 2.4e-31
Identities = 50/130 (38%), Positives = 66/130 (50%)
Query: 197 KQGGRCKCNGHASRCIKSPQGELVCECRHNTAGKDCEKCKPFFSDRPWGRATVYD----- 251
K GRCKCN HA+ C+ +L CEC HNT G DC KCK + RPW +
Sbjct: 215 KVHGRCKCNLHATVCVYD-NSKLTCECEHNTTGPDCGKCKKNYQGRPWSPGSYLPIPKGT 273
Query: 252 ANEC-----KGGRCKCNGHASRCIKSPQ-GALVC-ECRHNTAGKDCEKCK-PFFSDRPWG 303
AN C G C+C GH++RC ++C C+HNT G+ CE C+ +F +
Sbjct: 274 ANTCIPSISSIGNCECFGHSNRCSYIDLLNTVICVSCKHNTRGQHCELCRLGYFRN---A 330
Query: 304 RATVYDANEC 313
A + D N C
Sbjct: 331 SAELDDENVC 340
Score = 156 (60.0 bits), Expect = 2.4e-31, Sum P(2) = 2.4e-31
Identities = 39/125 (31%), Positives = 61/125 (48%)
Query: 74 CDAGSPRGRFPAEYLTDLNNPSNVTCWRSEAQTSVNSLSASPDNVTLTLSLGKKFELT-Y 132
CDA +P P E + D T W+S P V +TLS K ELT
Sbjct: 15 CDASTPELAHPPELMFDFEGRHPSTFWQSATWKEY----PKPLQVNITLSWSKTIELTDN 70
Query: 133 ISLSFCPKSIKPDSLAIYKSQDFGKSWQPLQFYSSQCKKLYGRTATGV--ISRGNEQEAL 190
I ++F +S +PD + + KS D+G++WQP Q+Y++ C + V +S+ E +
Sbjct: 71 IVITF--ESGRPDQMILEKSLDYGRTWQPYQYYATDCLDAFHMDPKSVKDLSQHTVLEII 128
Query: 191 CTDRH 195
CT+ +
Sbjct: 129 CTEEY 133
Score = 151 (58.2 bits), Expect = 4.2e-20, Sum P(2) = 4.2e-20
Identities = 36/102 (35%), Positives = 51/102 (50%)
Query: 200 GRCKCNGHASRCIKSPQ-GELVC-ECRHNTAGKDCEKCK-PFFSDRPWGRATVYDANECK 256
G C+C GH++RC ++C C+HNT G+ CE C+ +F + A + D N C
Sbjct: 285 GNCECFGHSNRCSYIDLLNTVICVSCKHNTRGQHCELCRLGYFRN---ASAELDDENVCI 341
Query: 257 GGRCKCNGHAS---RCIKSPQGALVCECRHNTAGKDCEKCKP 295
C CN S RC G+ CEC+ T G C++C P
Sbjct: 342 --ECYCNPLGSVHDRC----NGSGFCECKTGTTGPKCDECLP 377
>UNIPROTKB|P07942 [details] [associations]
symbol:LAMB1 "Laminin subunit beta-1" species:9606 "Homo
sapiens" [GO:0005178 "integrin binding" evidence=IEA] [GO:0007162
"negative regulation of cell adhesion" evidence=IEA] [GO:0007566
"embryo implantation" evidence=IEA] [GO:0016477 "cell migration"
evidence=IEA] [GO:0019899 "enzyme binding" evidence=IEA]
[GO:0043208 "glycosphingolipid binding" evidence=IEA] [GO:0048471
"perinuclear region of cytoplasm" evidence=ISS] [GO:0043257
"laminin-8 complex" evidence=IDA;TAS] [GO:0005607 "laminin-2
complex" evidence=IDA;TAS] [GO:0031175 "neuron projection
development" evidence=IDA] [GO:0042476 "odontogenesis"
evidence=IDA] [GO:0005604 "basement membrane" evidence=IDA;TAS]
[GO:0005198 "structural molecule activity" evidence=NAS]
[GO:0005606 "laminin-1 complex" evidence=IDA;TAS;IPI] [GO:0030335
"positive regulation of cell migration" evidence=IDA] [GO:0043259
"laminin-10 complex" evidence=IDA] [GO:0005615 "extracellular
space" evidence=IDA] [GO:0070062 "extracellular vesicular exosome"
evidence=IDA] [GO:0005201 "extracellular matrix structural
constituent" evidence=IDA] [GO:0007155 "cell adhesion"
evidence=TAS] [GO:0050679 "positive regulation of epithelial cell
proliferation" evidence=TAS] [GO:0005576 "extracellular region"
evidence=TAS] [GO:0007411 "axon guidance" evidence=TAS] [GO:0034446
"substrate adhesion-dependent cell spreading" evidence=IDA]
[GO:0031012 "extracellular matrix" evidence=ISS] GO:GO:0048471
Pathway_Interaction_DB:a6b1_a6b4_integrin_pathway
Reactome:REACT_111045 Reactome:REACT_111102 GO:GO:0007411
GO:GO:0005615 GO:GO:0016477 GO:GO:0070062 PROSITE:PS00022
PROSITE:PS01186 GO:GO:0007162 GO:GO:0030335 InterPro:IPR002049
Pfam:PF00053 SMART:SM00180 PROSITE:PS01248 PROSITE:PS50027
GO:GO:0034446 Pathway_Interaction_DB:amb2_neutrophils_pathway
GO:GO:0042476 DrugBank:DB00009 DrugBank:DB00029 DrugBank:DB00031
EMBL:CH236947 GO:GO:0050679 GO:GO:0007566 InterPro:IPR009053
SUPFAM:SSF46579 DrugBank:DB00015 GO:GO:0005201 GO:GO:0043208
InterPro:IPR008211 Pfam:PF00055 SMART:SM00136 PROSITE:PS51117
GO:GO:0005606 GO:GO:0043259 eggNOG:NOG241384 HOGENOM:HOG000007552
GO:GO:0005607 GO:GO:0043257 KO:K05636 InterPro:IPR013015
PROSITE:PS51116 EMBL:M61951 EMBL:M58147 EMBL:M61917 EMBL:M61918
EMBL:M61921 EMBL:M61922 EMBL:M61923 EMBL:M61924 EMBL:M61925
EMBL:M61926 EMBL:M61927 EMBL:M61928 EMBL:M61929 EMBL:M61930
EMBL:M61931 EMBL:M61932 EMBL:M61933 EMBL:M61934 EMBL:M61935
EMBL:M61936 EMBL:M61938 EMBL:M61939 EMBL:M61940 EMBL:M61941
EMBL:M61942 EMBL:M61943 EMBL:M61944 EMBL:M61945 EMBL:M61946
EMBL:M61947 EMBL:M61948 EMBL:M61949 EMBL:M61950 EMBL:M55370
EMBL:M55378 EMBL:M55365 EMBL:M55371 EMBL:M55372 EMBL:M55373
EMBL:M55374 EMBL:M55375 EMBL:M55376 EMBL:M55344 EMBL:M55345
EMBL:M55346 EMBL:M55347 EMBL:M55348 EMBL:M55349 EMBL:M55350
EMBL:M55351 EMBL:M55352 EMBL:M55353 EMBL:M55355 EMBL:M55356
EMBL:M55357 EMBL:M55358 EMBL:M55359 EMBL:M55360 EMBL:M55361
EMBL:M55362 EMBL:M55363 EMBL:M55364 EMBL:M55366 EMBL:M55367
EMBL:M55368 EMBL:M55369 EMBL:M61916 EMBL:BC113455 EMBL:M20206
IPI:IPI00013976 PIR:S13547 RefSeq:NP_002282.2 UniGene:Hs.650585
ProteinModelPortal:P07942 SMR:P07942 IntAct:P07942
MINT:MINT-2860329 STRING:P07942 PhosphoSite:P07942 DMDM:126366
PaxDb:P07942 PRIDE:P07942 Ensembl:ENST00000222399 GeneID:3912
KEGG:hsa:3912 UCSC:uc003vev.2 CTD:3912 GeneCards:GC07M107564
H-InvDB:HIX0025323 HGNC:HGNC:6486 HPA:CAB004256 HPA:HPA004056
HPA:HPA004132 MIM:150240 neXtProt:NX_P07942 PharmGKB:PA30275
HOVERGEN:HBG052301 PhylomeDB:P07942 ChiTaRS:LAMB1 GenomeRNAi:3912
NextBio:15367 ArrayExpress:P07942 Bgee:P07942 CleanEx:HS_LAMB1
Genevestigator:P07942 GermOnline:ENSG00000091136 Uniprot:P07942
Length = 1786
Score = 229 (85.7 bits), Expect = 1.0e-30, Sum P(2) = 1.0e-30
Identities = 50/132 (37%), Positives = 69/132 (52%)
Query: 200 GRCKCNGHASRCI------KSPQGELV--CECRHNTAGKDCEKCKPFFSDRPWGRATVYD 251
G C C GHAS C + +G + C CRHNT G +CE C F+ D PW A +
Sbjct: 269 GNCFCYGHASECAPVDGFNEEVEGMVHGHCMCRHNTKGLNCELCMDFYHDLPWRPAEGRN 328
Query: 252 ANECKGGRCKCNGHASRC-----IKSPQGAL---VCE-CRHNTAGKDCEKCKPFFSDRPW 302
+N CK +C CN H+ C + G + VC+ C+HNT G++CE+CKPF+ P
Sbjct: 329 SNACK--KCNCNEHSISCHFDMAVYLATGNVSGGVCDDCQHNTMGRNCEQCKPFYYQHP- 385
Query: 303 GRATVYDANECK 314
+ D N C+
Sbjct: 386 -ERDIRDPNFCE 396
Score = 165 (63.1 bits), Expect = 1.0e-30, Sum P(2) = 1.0e-30
Identities = 52/204 (25%), Positives = 96/204 (47%)
Query: 1 MHFLKLLCVPLLIGAVCGEKIDLNSDPCYENGRPR-RCIPDFVNAAFG--QEVKVNSVCG 57
M L+LL L A+C ++ +P + G C P + G Q++ V S CG
Sbjct: 1 MGLLQLLAFSFL--ALCRARVRAQ-EPEFSYGCAEGSCYPATGDLLIGRAQKLSVTSTCG 57
Query: 58 LESPERYCDTSGA-----CHVCDAGSPRGRFPAEYLTDLNNPSNVTCWRSEAQTSVNSLS 112
L PE YC S C +C++ P + D + NV + + + S
Sbjct: 58 LHKPEPYCIVSHLQEDKKCFICNSQDP---YHETLNPDSHLIENVVTTFAPNRLKIWWQS 114
Query: 113 ASP-DNVTLTLSLGKKFELTYISLSFCPKSIKPDSLAIYKSQDFGKSWQPLQFYSSQCKK 171
+ +NVT+ L L +F T++ ++F K+ +P ++ I +S DFGK+W ++++ C+
Sbjct: 115 ENGVENVTIQLDLEAEFHFTHLIMTF--KTFRPAAMLIERSSDFGKTWGVYRYFAYDCEA 172
Query: 172 LYGRTATGVISRGNEQEALCTDRH 195
+ +TG + + ++ +C R+
Sbjct: 173 SFPGISTGPMKKVDD--IICDSRY 194
Score = 153 (58.9 bits), Expect = 8.1e-20, Sum P(2) = 8.1e-20
Identities = 38/117 (32%), Positives = 56/117 (47%)
Query: 201 RCKCNGHASRC-----IKSPQGEL---VCE-CRHNTAGKDCEKCKPFFSDRPWGRATVYD 251
+C CN H+ C + G + VC+ C+HNT G++CE+CKPF+ P + D
Sbjct: 334 KCNCNEHSISCHFDMAVYLATGNVSGGVCDDCQHNTMGRNCEQCKPFYYQHP--ERDIRD 391
Query: 252 ANECKGGRCKCNGHASR----CIKSPQ---GALV--CECRHNTAGKDCEKCKPFFSD 299
N C+ RC C+ S+ C G + C C+ N G+ C+ CK F D
Sbjct: 392 PNFCE--RCTCDPAGSQNEGICDSYTDFSTGLIAGQCRCKLNVEGEHCDVCKEGFYD 446
Score = 100 (40.3 bits), Expect = 2.6e-14, Sum P(2) = 2.6e-14
Identities = 30/110 (27%), Positives = 44/110 (40%)
Query: 204 CNGHASRCIKSPQGELVCECRHNTAGKDCEKCKPFFSDRPWGRATVYDANECKGGRCKCN 263
CNG +C K+ G+ C C N G++C++C P W A+ C C CN
Sbjct: 1040 CNGSDCQCDKAT-GQ--CLCLPNVIGQNCDRCAP----NTWQLAS---GTGCDP--CNCN 1087
Query: 264 GHASRCIKSPQGALVCECRHNTAGKDCEKCKPFFSDRPWGRATVYDANEC 313
S + C+C G+ C +C+ F WG V + C
Sbjct: 1088 AAHSFGPSCNEFTGQCQCMPGFGGRTCSECQELF----WGDPDV-ECRAC 1132
Score = 99 (39.9 bits), Expect = 3.4e-14, Sum P(2) = 3.4e-14
Identities = 27/99 (27%), Positives = 37/99 (37%)
Query: 199 GGRCKCNGHAS-RCIKSPQGELVCECRHNTAGKDCEKCKP-FFSDRPWGRATVYDANECK 256
G C+C+ S + P G C+CR N G+ C +C P F P G CK
Sbjct: 770 GLACECDPQGSLSSVCDPNGGQ-CQCRPNVVGRTCNRCAPGTFGFGPSG---------CK 819
Query: 257 GGRCKCNGHASRCIKSPQGALVCECRHNTAGKDCEKCKP 295
C G + G C C + C++C P
Sbjct: 820 PCECHLQGSVNAFCNPVTGQ--CHCFQGVYARQCDRCLP 856
Score = 98 (39.6 bits), Expect = 4.3e-14, Sum P(2) = 4.3e-14
Identities = 26/94 (27%), Positives = 39/94 (41%)
Query: 202 CKCN--GHASRCIKSPQGELVCECRHNTAGKDCEKCKPFFSDRPWGRATVYDANECKGGR 259
C+C+ G + G+ C C + C++C P WG + C+
Sbjct: 821 CECHLQGSVNAFCNPVTGQ--CHCFQGVYARQCDRCLPGH----WGFPS------CQP-- 866
Query: 260 CKCNGHASRCIKSPQGALVCECRHNTAGKDCEKC 293
C+CNGHA C P C+ T G +CE+C
Sbjct: 867 CQCNGHADDC--DPVTGECLNCQDYTMGHNCERC 898
Score = 96 (38.9 bits), Expect = 6.9e-14, Sum P(2) = 6.9e-14
Identities = 34/135 (25%), Positives = 50/135 (37%)
Query: 168 QCKKLYGRTAT--GVISRGNEQEALCTDRHKKQGGRCKCNGHASRCIKSPQGELV--CEC 223
QC K G+ VI + ++ A T + G CN +A+ E C+C
Sbjct: 1046 QCDKATGQCLCLPNVIGQNCDRCAPNTWQLASGTGCDPCNCNAAHSFGPSCNEFTGQCQC 1105
Query: 224 RHNTAGKDCEKCKPFFSDRPWGRATVYDANECKGGRCKCNGHASRCIKSPQGALVCECRH 283
G+ C +C+ F WG V EC+ C C+ + Q C C
Sbjct: 1106 MPGFGGRTCSECQELF----WGDPDV----ECRA--CDCDPRGIETPQCDQSTGQCVCVE 1155
Query: 284 NTAGKDCEKCKPFFS 298
G C+KC +S
Sbjct: 1156 GVEGPRCDKCTRGYS 1170
Score = 89 (36.4 bits), Expect = 3.7e-13, Sum P(2) = 3.7e-13
Identities = 38/150 (25%), Positives = 56/150 (37%)
Query: 168 QCKKLYGRTATGVISRGNEQE-ALCTDRHKKQGGRCKCNGHASRCIKSPQGELVCECRHN 226
QCK Y + I N E C + G C S + + Q C C+ N
Sbjct: 376 QCKPFYYQHPERDIRDPNFCERCTCDPAGSQNEGICDSYTDFSTGLIAGQ----CRCKLN 431
Query: 227 TAGKDCEKCKPFFSDRPWGRATVYDANECKGGRCKCNGHASRCIKSPQGALV--CECRHN 284
G+ C+ CK F D + D CK C CN + +P + C C+
Sbjct: 432 VEGEHCDVCKEGFYD-----LSSEDPFGCKS--CACNPLGTIPGGNPCDSETGHCYCKRL 484
Query: 285 TAGKDCEKCKPFFSDRPWGRATVYDANECK 314
G+ C++C P WG + D + C+
Sbjct: 485 VTGQHCDQCLP----EHWGLSN--DLDGCR 508
Score = 88 (36.0 bits), Expect = 4.6e-13, Sum P(2) = 4.6e-13
Identities = 19/75 (25%), Positives = 32/75 (42%)
Query: 221 CECRHNTAGKDCEKCKPFFSDRPWGRATVYDANECKGGRCKCNGHASRCIKSPQGALVCE 280
C C+ G+ C++C P WG + D + C+ C G + + G C
Sbjct: 479 CYCKRLVTGQHCDQCLP----EHWGLSN--DLDGCRPCDCDLGGALNNSCFAESGQ--CS 530
Query: 281 CRHNTAGKDCEKCKP 295
CR + G+ C + +P
Sbjct: 531 CRPHMIGRQCNEVEP 545
Score = 66 (28.3 bits), Expect = 8.8e-11, Sum P(2) = 8.8e-11
Identities = 26/110 (23%), Positives = 43/110 (39%)
Query: 208 ASRCIKSPQG-ELVCECRHNTAGKDCEKCKPFFSDRPWGRATVYDANECKGGRCKCNGHA 266
A C + P +L C C G C+ C + P + V C+ +C N
Sbjct: 930 ARSCYQDPVTLQLACVCDPGYIGSRCDDCASGYFGNP---SEV--GGSCQPCQCHNNIDT 984
Query: 267 S---RCIKSPQGALVCECRHNTAGKDCEKCKPFFSDRPWGRATVYDANEC 313
+ C K L +C ++T G+ C+ C+ + +G A D +C
Sbjct: 985 TDPEACDKETGRCL--KCLYHTEGEHCQFCRFGY----YGDALQQDCRKC 1028
>UNIPROTKB|E1BWU4 [details] [associations]
symbol:E1BWU4 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0007409 "axonogenesis" evidence=IEA]
[GO:0046658 "anchored to plasma membrane" evidence=IEA]
InterPro:IPR000742 PROSITE:PS50026 SMART:SM00181 InterPro:IPR013032
PROSITE:PS00022 InterPro:IPR002049 Pfam:PF00053 SMART:SM00180
PROSITE:PS01248 PROSITE:PS50027 InterPro:IPR008211 Pfam:PF00055
SMART:SM00136 PROSITE:PS51117 GeneTree:ENSGT00700000104042
OMA:YCECFGH EMBL:AADN02033768 EMBL:AADN02033769 EMBL:AADN02033770
EMBL:AADN02033771 EMBL:AADN02033772 IPI:IPI00587584
ProteinModelPortal:E1BWU4 Ensembl:ENSGALT00000002932 Uniprot:E1BWU4
Length = 541
Score = 222 (83.2 bits), Expect = 1.7e-30, Sum P(2) = 1.7e-30
Identities = 49/126 (38%), Positives = 64/126 (50%)
Query: 201 RCKCNGHASRCIKSPQGELVCECRHNTAGKDCEKCKPFFSDRPWGRATVYD-----ANEC 255
RCKCN HA+ C K L+CEC HNT G DC KCK + RPW + AN C
Sbjct: 298 RCKCNLHATGC-KEENKRLLCECEHNTTGPDCGKCKKNYQGRPWSPGSYLPIPKGTANIC 356
Query: 256 -----KGGRCKCNGHASRC--IKSPQGALVCECRHNTAGKDCEKCK-PFFSDRPWGRATV 307
G C+C GH++RC I+ + C+HNT G+ CE C+ +F + A +
Sbjct: 357 IPSISSIGNCECFGHSNRCSYIELLNTVICVSCKHNTRGQHCELCRLGYFRN---ASAEL 413
Query: 308 YDANEC 313
D N C
Sbjct: 414 DDENVC 419
Score = 167 (63.8 bits), Expect = 1.7e-30, Sum P(2) = 1.7e-30
Identities = 45/146 (30%), Positives = 71/146 (48%)
Query: 56 CGLESPERYCDTSGA--CH-VCDAGSPRGRFPAEYLTDLNNPSNVTCWRSEAQTSVNSLS 112
CG + PE +C C+ CDA + P E + DL T W+S
Sbjct: 72 CG-DPPETFCAMGNPYMCNNECDASTQELAHPPELMFDLEGRHPSTFWQSTTWKDY---- 126
Query: 113 ASPDNVTLTLSLGKKFELT-YISLSFCPKSIKPDSLAIYKSQDFGKSWQPLQFYSSQCKK 171
P +V +TLS K ELT I ++F +S +PD + + KS D+G++WQP Q+Y++ C
Sbjct: 127 PKPLHVNITLSWNKTIELTDNIVITF--ESGRPDQMILEKSLDYGRTWQPYQYYATDCLD 184
Query: 172 LYGRTATGV--ISRGNEQEALCTDRH 195
+ V +S+ E +CT+ +
Sbjct: 185 AFHMDPKSVKDLSQHTVLEIICTEEY 210
Score = 151 (58.2 bits), Expect = 3.2e-21, Sum P(2) = 3.2e-21
Identities = 36/102 (35%), Positives = 52/102 (50%)
Query: 200 GRCKCNGHASRCIKSPQ-GELVC-ECRHNTAGKDCEKCK-PFFSDRPWGRATVYDANECK 256
G C+C GH++RC ++C C+HNT G+ CE C+ +F + A + D N C
Sbjct: 364 GNCECFGHSNRCSYIELLNTVICVSCKHNTRGQHCELCRLGYFRN---ASAELDDENVCI 420
Query: 257 GGRCKCNGHAS---RCIKSPQGALVCECRHNTAGKDCEKCKP 295
C CN S RC + +G CEC+ +G C+KC P
Sbjct: 421 D--CYCNPFGSVHDRC--NDRG--FCECKEGASGPKCDKCLP 456
Score = 87 (35.7 bits), Expect = 1.5e-14, Sum P(2) = 1.5e-14
Identities = 28/96 (29%), Positives = 39/96 (40%)
Query: 202 CKCNGHAS---RCIKSPQGELVCECRHNTAGKDCEKCKPFFSDRPWGRATVYDANECKGG 258
C CN S RC + +G CEC+ +G C+KC P + W + N C
Sbjct: 422 CYCNPFGSVHDRC--NDRG--FCECKEGASGPKCDKCLPGYI---W-HSLGCQPNVCDNE 473
Query: 259 RCKCNGHASRCIKSPQGALVCECRHNTAGKDCEKCK 294
C + CI + + C+C G CEK K
Sbjct: 474 LLHCQ-NGGTCINNVR----CQCPPAYTGILCEKLK 504
>UNIPROTKB|E2QZY0 [details] [associations]
symbol:NTN4 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005576 "extracellular region" evidence=IEA]
InterPro:IPR001134 PROSITE:PS50189 GO:GO:0005576 InterPro:IPR002049
InterPro:IPR008993 Pfam:PF00053 SMART:SM00180 SUPFAM:SSF50242
PROSITE:PS01248 PROSITE:PS50027 InterPro:IPR018933 Pfam:PF01759
SMART:SM00643 InterPro:IPR008211 Pfam:PF00055 SMART:SM00136
PROSITE:PS51117 GeneTree:ENSGT00700000104042 CTD:59277 KO:K06845
OMA:RSQDFGK EMBL:AAEX03009952 EMBL:AAEX03009953 RefSeq:XP_532655.2
Ensembl:ENSCAFT00000010328 GeneID:475431 KEGG:cfa:475431
Uniprot:E2QZY0
Length = 628
Score = 228 (85.3 bits), Expect = 2.5e-30, Sum P(2) = 2.5e-30
Identities = 53/129 (41%), Positives = 68/129 (52%)
Query: 200 GRCKCNGHASRCI--------KSPQGELV----CECRHNTAGKDCEKCKPFFSDRPWGRA 247
G C CNGHA +CI K+P V C C+HNTAG C+ C P ++DRPW A
Sbjct: 260 GSCFCNGHADQCIPVDGFRPVKAPGAFHVVHGKCMCKHNTAGTHCQHCAPLYNDRPWEAA 319
Query: 248 T--VYDANECKGGRCKCNGHASRC-----IKSPQGAL---VC-ECRHNTAGKDCEKCKP- 295
EC+ CKCNGHA C + G VC +C+HNT G+ C++CKP
Sbjct: 320 DGKTGSPKECR--TCKCNGHADTCHFDINVWEASGNRSGGVCNDCQHNTEGQHCQRCKPG 377
Query: 296 FFSD--RPW 302
F+ D RP+
Sbjct: 378 FYRDLRRPF 386
Score = 152 (58.6 bits), Expect = 2.5e-30, Sum P(2) = 2.5e-30
Identities = 45/171 (26%), Positives = 77/171 (45%)
Query: 35 RRCIPDFVNAAFGQEVKVNSVCGLESPERYCDTSG---------ACHVCDAGSPR-GRFP 84
+ C P N A G+++ ++ CG + E YC S C C+A P P
Sbjct: 32 KACNPRMGNLALGRKLWADTTCGQNATELYCSYSENTDLTCRQPKCDKCNAAQPHLAHLP 91
Query: 85 AEYLTDLNNPSNVTCWRSEAQTSVNSLSASPDNVTLTLSLGKKFELTYISLSFCPKSIKP 144
A + D + T W+S + L L +F T++ + F KS +P
Sbjct: 92 AA-MADSSFRFPRTWWQSAEDVHREKIQ---------LDLEAEFYFTHLIMVF--KSPRP 139
Query: 145 DSLAIYKSQDFGKSWQPLQFYSSQCKKLYGRTATGVISRGNEQEALCTDRH 195
++ + +SQDFGK+W+P +++++ C +G V +G A+CT R+
Sbjct: 140 AAMVLDRSQDFGKTWKPYKYFATNCSTTFG-LEDDVFKKG----AICTSRY 185
Score = 138 (53.6 bits), Expect = 7.1e-18, Sum P(2) = 7.1e-18
Identities = 41/116 (35%), Positives = 55/116 (47%)
Query: 197 KQGGRCKCNGHASRC-----IKSPQGEL---VC-ECRHNTAGKDCEKCKP-FFSD--RPW 244
K+ CKCNGHA C + G VC +C+HNT G+ C++CKP F+ D RP+
Sbjct: 327 KECRTCKCNGHADTCHFDINVWEASGNRSGGVCNDCQHNTEGQHCQRCKPGFYRDLRRPF 386
Query: 245 GRATVYDANECKGGRCKCN--GHASRCIKS-----PQGALVCECRHNTAGKDCEKC 293
DA CK C C+ G A+ S P C C+ AG C++C
Sbjct: 387 SAP---DA--CK--MCSCHPVGSAALPFSSVTFCDPSNG-DCPCKPGVAGPHCDRC 434
Score = 134 (52.2 bits), Expect = 1.9e-17, Sum P(2) = 1.9e-17
Identities = 27/60 (45%), Positives = 33/60 (55%)
Query: 258 GRCKCNGHASRCI--------KSPQGALV----CECRHNTAGKDCEKCKPFFSDRPWGRA 305
G C CNGHA +CI K+P V C C+HNTAG C+ C P ++DRPW A
Sbjct: 260 GSCFCNGHADQCIPVDGFRPVKAPGAFHVVHGKCMCKHNTAGTHCQHCAPLYNDRPWEAA 319
Score = 38 (18.4 bits), Expect = 6.6e-06, Sum P(2) = 6.6e-06
Identities = 6/12 (50%), Positives = 8/12 (66%)
Query: 28 CYENGRPRRCIP 39
C+ NG +CIP
Sbjct: 262 CFCNGHADQCIP 273
>UNIPROTKB|Q9HB63 [details] [associations]
symbol:NTN4 "Netrin-4" species:9606 "Homo sapiens"
[GO:0016322 "neuron remodeling" evidence=IEA] [GO:0043237
"laminin-1 binding" evidence=IEA] [GO:0060668 "regulation of
branching involved in salivary gland morphogenesis by extracellular
matrix-epithelial cell signaling" evidence=IEA] [GO:0005604
"basement membrane" evidence=IEA] [GO:0005886 "plasma membrane"
evidence=TAS] [GO:0007411 "axon guidance" evidence=TAS]
InterPro:IPR001134 PROSITE:PS50189 GO:GO:0005886
Reactome:REACT_111045 GO:GO:0007411 GO:GO:0016322 EMBL:CH471054
PROSITE:PS00022 InterPro:IPR002049 InterPro:IPR008993 Pfam:PF00053
SMART:SM00180 SUPFAM:SSF50242 PROSITE:PS01248 PROSITE:PS50027
GO:GO:0005604 InterPro:IPR018933 Pfam:PF01759 SMART:SM00643
InterPro:IPR008211 Pfam:PF00055 SMART:SM00136 PROSITE:PS51117
EMBL:AF278532 EMBL:AF297711 EMBL:AF119916 EMBL:AY330211
EMBL:AL137540 EMBL:BC013591 EMBL:BC136798 EMBL:BC136799
EMBL:AL833767 EMBL:AK024691 IPI:IPI00328091 IPI:IPI00385236
IPI:IPI00472613 PIR:T46383 RefSeq:NP_067052.2 UniGene:Hs.201034
ProteinModelPortal:Q9HB63 SMR:Q9HB63 DIP:DIP-46274N IntAct:Q9HB63
MINT:MINT-1463888 STRING:Q9HB63 PhosphoSite:Q9HB63 DMDM:76789662
PaxDb:Q9HB63 PRIDE:Q9HB63 Ensembl:ENST00000343702
Ensembl:ENST00000344911 Ensembl:ENST00000538383
Ensembl:ENST00000553059 GeneID:59277 KEGG:hsa:59277 UCSC:uc001tei.3
UCSC:uc009ztf.3 CTD:59277 GeneCards:GC12M095984 HGNC:HGNC:13658
HPA:HPA049832 MIM:610401 neXtProt:NX_Q9HB63 PharmGKB:PA31815
eggNOG:NOG329215 HOVERGEN:HBG082019 InParanoid:Q9HB63 KO:K06845
OMA:RSQDFGK PhylomeDB:Q9HB63 ChiTaRS:NTN4 GenomeRNAi:59277
NextBio:65162 ArrayExpress:Q9HB63 Bgee:Q9HB63 CleanEx:HS_NTN4
Genevestigator:Q9HB63 GermOnline:ENSG00000074527 GO:GO:0060668
Uniprot:Q9HB63
Length = 628
Score = 230 (86.0 bits), Expect = 2.7e-30, Sum P(2) = 2.7e-30
Identities = 54/129 (41%), Positives = 70/129 (54%)
Query: 200 GRCKCNGHASRCI--------KSPQG-ELV---CECRHNTAGKDCEKCKPFFSDRPWGRA 247
G C CNGHA +CI K+P +V C C+HNTAG C+ C P ++DRPW A
Sbjct: 260 GSCFCNGHADQCIPVHGFRPVKAPGTFHMVHGKCMCKHNTAGSHCQHCAPLYNDRPWEAA 319
Query: 248 TVYDA--NECKGGRCKCNGHASRC-----IKSPQGAL---VCE-CRHNTAGKDCEKCKP- 295
NEC+ CKCNGHA C + G VC+ C+HNT G+ C++CKP
Sbjct: 320 DGKTGAPNECR--TCKCNGHADTCHFDVNVWEASGNRSGGVCDDCQHNTEGQYCQRCKPG 377
Query: 296 FFSD--RPW 302
F+ D RP+
Sbjct: 378 FYRDLRRPF 386
Score = 144 (55.7 bits), Expect = 2.7e-30, Sum P(2) = 2.7e-30
Identities = 43/171 (25%), Positives = 78/171 (45%)
Query: 35 RRCIPDFVNAAFGQEVKVNSVCGLESPERYCDTSG---------ACHVCDAGSPR-GRFP 84
+ C P N A G+++ ++ CG + E YC S C C+A P P
Sbjct: 32 KACNPRMGNLALGRKLWADTTCGQNATELYCFYSENTDLTCRQPKCDKCNAAYPHLAHLP 91
Query: 85 AEYLTDLNNPSNVTCWRSEAQTSVNSLSASPDNVTLTLSLGKKFELTYISLSFCPKSIKP 144
+ + D + T W+S + L L +F T++ + F KS +P
Sbjct: 92 SA-MADSSFRFPRTWWQSAEDVHREKIQ---------LDLEAEFYFTHLIVMF--KSPRP 139
Query: 145 DSLAIYKSQDFGKSWQPLQFYSSQCKKLYGRTATGVISRGNEQEALCTDRH 195
++ + +SQDFGK+W+P +++++ C +G V+ +G A+CT ++
Sbjct: 140 AAMVLDRSQDFGKTWKPYKYFATNCSATFG-LEDDVVKKG----AICTSKY 185
Score = 136 (52.9 bits), Expect = 1.0e-16, Sum P(2) = 1.0e-16
Identities = 31/72 (43%), Positives = 39/72 (54%)
Query: 258 GRCKCNGHASRCI--------KSPQGA--LV---CECRHNTAGKDCEKCKPFFSDRPWGR 304
G C CNGHA +CI K+P G +V C C+HNTAG C+ C P ++DRPW
Sbjct: 260 GSCFCNGHADQCIPVHGFRPVKAP-GTFHMVHGKCMCKHNTAGSHCQHCAPLYNDRPWEA 318
Query: 305 ATVYDA--NECK 314
A NEC+
Sbjct: 319 ADGKTGAPNECR 330
Score = 134 (52.2 bits), Expect = 1.6e-16, Sum P(2) = 1.6e-16
Identities = 39/109 (35%), Positives = 51/109 (46%)
Query: 202 CKCNGHASRC-----IKSPQGEL---VCE-CRHNTAGKDCEKCKP-FFSD--RPWGRATV 249
CKCNGHA C + G VC+ C+HNT G+ C++CKP F+ D RP+
Sbjct: 332 CKCNGHADTCHFDVNVWEASGNRSGGVCDDCQHNTEGQYCQRCKPGFYRDLRRPFSAP-- 389
Query: 250 YDANECKGGRCKCNGHA-----SRCIKSPQGALVCECRHNTAGKDCEKC 293
DA CK C G A S P C C+ AG+ C++C
Sbjct: 390 -DA--CKPCSCHPVGSAVLPANSVTFCDPSNG-DCPCKPGVAGRRCDRC 434
Score = 38 (18.4 bits), Expect = 1.9e-05, Sum P(2) = 1.9e-05
Identities = 6/12 (50%), Positives = 8/12 (66%)
Query: 28 CYENGRPRRCIP 39
C+ NG +CIP
Sbjct: 262 CFCNGHADQCIP 273
>UNIPROTKB|O15230 [details] [associations]
symbol:LAMA5 "Laminin subunit alpha-5" species:9606 "Homo
sapiens" [GO:0005606 "laminin-1 complex" evidence=IEA] [GO:0030155
"regulation of cell adhesion" evidence=IEA] [GO:0030334 "regulation
of cell migration" evidence=IEA] [GO:0045995 "regulation of
embryonic development" evidence=IEA] [GO:0001658 "branching
involved in ureteric bud morphogenesis" evidence=IEA] [GO:0001738
"morphogenesis of a polarized epithelium" evidence=IEA] [GO:0001755
"neural crest cell migration" evidence=IEA] [GO:0001942 "hair
follicle development" evidence=IEA] [GO:0007517 "muscle organ
development" evidence=IEA] [GO:0016331 "morphogenesis of embryonic
epithelium" evidence=IEA] [GO:0030324 "lung development"
evidence=IEA] [GO:0042127 "regulation of cell proliferation"
evidence=IEA] [GO:0042384 "cilium assembly" evidence=IEA]
[GO:0042475 "odontogenesis of dentin-containing tooth"
evidence=IEA] [GO:0060445 "branching involved in salivary gland
morphogenesis" evidence=IEA] [GO:0090002 "establishment of protein
localization to plasma membrane" evidence=IEA] [GO:0005198
"structural molecule activity" evidence=IC] [GO:0016477 "cell
migration" evidence=IDA] [GO:0030154 "cell differentiation"
evidence=NAS] [GO:0008283 "cell proliferation" evidence=NAS]
[GO:0005605 "basal lamina" evidence=NAS] [GO:0048041 "focal
adhesion assembly" evidence=NAS] [GO:0009790 "embryo development"
evidence=NAS] [GO:0045446 "endothelial cell differentiation"
evidence=NAS] [GO:0008037 "cell recognition" evidence=NAS]
[GO:0001525 "angiogenesis" evidence=NAS] [GO:0005178 "integrin
binding" evidence=IDA] [GO:0007229 "integrin-mediated signaling
pathway" evidence=IMP] [GO:0007010 "cytoskeleton organization"
evidence=NAS] [GO:0043259 "laminin-10 complex" evidence=IDA;TAS]
[GO:0005615 "extracellular space" evidence=IDA] [GO:0005604
"basement membrane" evidence=IDA] [GO:0005576 "extracellular
region" evidence=TAS] [GO:0031012 "extracellular matrix"
evidence=IDA] [GO:0043260 "laminin-11 complex" evidence=TAS]
[GO:0034446 "substrate adhesion-dependent cell spreading"
evidence=IDA] InterPro:IPR001368 InterPro:IPR009254
InterPro:IPR010307 Pfam:PF06008 Pfam:PF06009
Pathway_Interaction_DB:a6b1_a6b4_integrin_pathway GO:GO:0007010
GO:GO:0005615 GO:GO:0016477 GO:GO:0030155 GO:GO:0005198
GO:GO:0030324 GO:GO:0008283 GO:GO:0001755 GO:GO:0001525
InterPro:IPR013032 PROSITE:PS00022 GO:GO:0042127
Gene3D:2.60.120.200 InterPro:IPR008985 InterPro:IPR013320
SUPFAM:SSF49899 GO:GO:0009790 GO:GO:0030334 GO:GO:0001942
GO:GO:0007517 GO:GO:0048041 GO:GO:0005178 PROSITE:PS01186
GO:GO:0007229 GO:GO:0042475 EMBL:AL354836 InterPro:IPR002049
InterPro:IPR001791 Pfam:PF00053 SMART:SM00180 SMART:SM00282
PROSITE:PS01248 PROSITE:PS50027 PROSITE:PS50025 GO:GO:0042384
GO:GO:0001738 GO:GO:0034446 GO:GO:0090002
Pathway_Interaction_DB:amb2_neutrophils_pathway GO:GO:0016331
GO:GO:0001658 DrugBank:DB00009 DrugBank:DB00029 DrugBank:DB00031
Pathway_Interaction_DB:syndecan_1_pathway GO:GO:0060445
Pfam:PF02210 GO:GO:0008037 DrugBank:DB00015 GO:GO:0045995
GO:GO:0045446 eggNOG:NOG292643 InterPro:IPR018031
InterPro:IPR000034 InterPro:IPR008211 Pfam:PF00052 Pfam:PF00055
SMART:SM00281 SMART:SM00136 PROSITE:PS51115 PROSITE:PS51117
GO:GO:0005606 HOGENOM:HOG000231235 HOVERGEN:HBG052300 KO:K06240
EMBL:AF443072 EMBL:AB067494 EMBL:AB011105 EMBL:Z95636
IPI:IPI00783665 RefSeq:NP_005551.3 UniGene:Hs.473256
ProteinModelPortal:O15230 SMR:O15230 IntAct:O15230
MINT:MINT-1183475 STRING:O15230 PhosphoSite:O15230 PaxDb:O15230
PRIDE:O15230 DNASU:3911 Ensembl:ENST00000252999 GeneID:3911
KEGG:hsa:3911 UCSC:uc002ycq.3 CTD:3911 GeneCards:GC20M060883
H-InvDB:HIX0015978 HGNC:HGNC:6485 MIM:601033 neXtProt:NX_O15230
PharmGKB:PA30274 InParanoid:O15230 OMA:LRHTTGP OrthoDB:EOG4VHK5G
ChiTaRS:LAMA5 GenomeRNAi:3911 NextBio:15363 ArrayExpress:O15230
Bgee:O15230 CleanEx:HS_LAMA5 Genevestigator:O15230
GermOnline:ENSG00000130702 GO:GO:0043259 GO:GO:0043260
Uniprot:O15230
Length = 3695
Score = 243 (90.6 bits), Expect = 5.1e-30, Sum P(2) = 5.1e-30
Identities = 51/122 (41%), Positives = 64/122 (52%)
Query: 199 GGRCKCNGHASRC-IKSPQG--ELVCECRHNTAGKDCEKCKPFFSDRPWGRATVYDANEC 255
GGRC C+GHA C K P L C C+HNT G C++C P F+ +PW AT ANEC
Sbjct: 297 GGRCVCHGHADACDAKDPTDPFRLQCTCQHNTCGGTCDRCCPGFNQQPWKPATANSANEC 356
Query: 256 KGGRCKCNGHASRCIKSP---------------QGALVC-ECRHNTAGKDCEKCKPFFSD 299
+ C C GHA+ C P QG VC +C+H+T G +CE+C P F
Sbjct: 357 QS--CNCYGHATDCYYDPEVDRRRASQSLDGTYQGGGVCIDCQHHTTGVNCERCLPGFYR 414
Query: 300 RP 301
P
Sbjct: 415 SP 416
Score = 167 (63.8 bits), Expect = 3.2e-18, Sum P(2) = 3.2e-18
Identities = 30/61 (49%), Positives = 37/61 (60%)
Query: 257 GGRCKCNGHASRC-IKSPQGA--LVCECRHNTAGKDCEKCKPFFSDRPWGRATVYDANEC 313
GGRC C+GHA C K P L C C+HNT G C++C P F+ +PW AT ANEC
Sbjct: 297 GGRCVCHGHADACDAKDPTDPFRLQCTCQHNTCGGTCDRCCPGFNQQPWKPATANSANEC 356
Query: 314 K 314
+
Sbjct: 357 Q 357
Score = 150 (57.9 bits), Expect = 3.0e-16, Sum P(2) = 3.0e-16
Identities = 37/102 (36%), Positives = 48/102 (47%)
Query: 202 CKCNGHASRCIKSPQGELVC-ECRHNTAGKDCEKCKP-FFSDRPWGRATVYDANECKGGR 259
C+C+GH+ RC+ P G VC +C+HNT G CE+C+ F S R A C
Sbjct: 1864 CQCHGHSDRCL--P-GSGVCVDCQHNTEGAHCERCQAGFVSSRDDPSAPCVSC-PCPLS- 1918
Query: 260 CKCNGHASRCIKSPQGALVCECRHNTAGKDCEKCKPFFSDRP 301
N A C+ G C C+ AG CE+C P F P
Sbjct: 1919 VPSNNFAEGCVLRG-GRTQCLCKPGYAGASCERCAPGFFGNP 1959
Score = 142 (55.0 bits), Expect = 5.1e-30, Sum P(2) = 5.1e-30
Identities = 49/181 (27%), Positives = 83/181 (45%)
Query: 39 PDFVNAAFGQEVKVNSVCGLESPER---------YCDTSGACHVCDAGSP----RGRFPA 85
P + N A G + ++ CG E+P R YC G G P RG++
Sbjct: 47 PPYFNLAEGARIAASATCGEEAPARGSPRPTEDLYCKLVGG--PVAGGDPNQTIRGQY-C 103
Query: 86 EYLTDLNN----PSNVTCWRSEA--QTSVNSLSASPDNVTLTLSLGKKFELTYISLSFCP 139
+ T N+ P++ +E Q+ S + V +TL LG+ F + Y+ + F
Sbjct: 104 DICTAANSNKAHPASNAIDGTERWWQSPPLSRGLEYNEVNVTLDLGQVFHVAYVLIKFA- 162
Query: 140 KSIKPDSLAIYKSQDFGKSWQPLQFYSSQ---CKKLYGRTATGVISRGNEQEALCTDRHK 196
S +PD + +S DFG+++QP QF++S C + +G I+R + A+CT +
Sbjct: 163 NSPRPDLWVLERSMDFGRTYQPWQFFASSKRDCLERFGPQTLERITR--DDAAICTTEYS 220
Query: 197 K 197
+
Sbjct: 221 R 221
Score = 124 (48.7 bits), Expect = 1.8e-13, Sum P(2) = 1.8e-13
Identities = 30/83 (36%), Positives = 45/83 (54%)
Query: 220 VCECRHNTAGKDCEKCKPFFSDRPWGRATVYDANECKGGRCKCNGHASRCIKSPQGALVC 279
+C C + G C++C P F G ++ C C+C+GH+ RC+ P G+ VC
Sbjct: 1830 LCLCPASYRGDSCQECAPGFYRDVKG---LF-LGRCVP--CQCHGHSDRCL--P-GSGVC 1880
Query: 280 -ECRHNTAGKDCEKCKP-FFSDR 300
+C+HNT G CE+C+ F S R
Sbjct: 1881 VDCQHNTEGAHCERCQAGFVSSR 1903
Score = 120 (47.3 bits), Expect = 4.7e-13, Sum P(2) = 4.7e-13
Identities = 38/131 (29%), Positives = 56/131 (42%)
Query: 202 CKCNGHASRCIKSP---------------QGELVC-ECRHNTAGKDCEKCKPFFSDRPWG 245
C C GHA+ C P QG VC +C+H+T G +CE+C P F P
Sbjct: 359 CNCYGHATDCYYDPEVDRRRASQSLDGTYQGGGVCIDCQHHTTGVNCERCLPGFYRSP-- 416
Query: 246 RATVYDANECKGGRCKCNGHAS--RCIKSPQGALVCECRHNTAGKDCEKCKPFFSDRPWG 303
+ + C+ RC C + C + G C CR N +G+ C+ C F+ P
Sbjct: 417 NHPLDSPHVCR--RCNCESDFTDGTC-EDLTGR--CYCRPNFSGERCDVCAEGFTGFPSC 471
Query: 304 RATVYDANECK 314
T +N+ +
Sbjct: 472 YPTPSSSNDTR 482
Score = 114 (45.2 bits), Expect = 2.0e-12, Sum P(2) = 2.0e-12
Identities = 29/102 (28%), Positives = 43/102 (42%)
Query: 198 QGGRCKCNGHASRCIKSPQGELVCECRHNTAGKDCEKCKPFFSDRPWGRATVYDANECKG 257
+ G C G A P+ ++ C CR + G C++CKP F WG + + C
Sbjct: 721 EAGSCHPAGLAPVDPALPEAQVPCMCRAHVEGPSCDRCKPGF----WGLSPS-NPEGCT- 774
Query: 258 GRCKCN--GHASRCIKSPQGALVCECRHNTAGKDCEKCKPFF 297
RC C+ G + G C C+ + G+ C CK F
Sbjct: 775 -RCSCDLRGTLGGVAECQPGTGQCFCKPHVCGQACASCKDGF 815
Score = 108 (43.1 bits), Expect = 8.2e-12, Sum P(2) = 8.2e-12
Identities = 31/104 (29%), Positives = 42/104 (40%)
Query: 202 CKCNGHAS-RCIKSPQ-GELVCECRHNTAGKDCEKCKPFFSDRPWGRATVYDANECKGGR 259
C C+ S P+ G+ C CR G C+ C P G Y+ C+ G
Sbjct: 677 CHCSAEGSLHAACDPRSGQ--CSCRPRVTGLRCDTCVP-------G---AYNFPYCEAGS 724
Query: 260 CKCNGHASRCIKSPQGALVCECRHNTAGKDCEKCKPFFSDRPWG 303
C G A P+ + C CR + G C++CKP F WG
Sbjct: 725 CHPAGLAPVDPALPEAQVPCMCRAHVEGPSCDRCKPGF----WG 764
Score = 101 (40.6 bits), Expect = 4.4e-11, Sum P(2) = 4.4e-11
Identities = 35/116 (30%), Positives = 48/116 (41%)
Query: 205 NGHASRCIKSPQGELVCECRHNTAGKDCEKCKPFFSDRPWGRATVYDANECKGGRCKCNG 264
N A C+ G C C+ AG CE+C P F +G V ++ C+ C C+G
Sbjct: 1922 NNFAEGCVLRG-GRTQCLCKPGYAGASCERCAPGF----FGNPLVLGSS-CQP--CDCSG 1973
Query: 265 HAS-RCIKSPQGALVCECR---HNTAGKDCEKCKP-FFSDR--PWGRATVYDANEC 313
+ + S L CR +T G CE C P F+ + P G T D C
Sbjct: 1974 NGDPNLLFSDCDPLTGACRGCLRHTTGPRCEICAPGFYGNALLP-GNCTRCDCTPC 2028
Score = 96 (38.9 bits), Expect = 1.4e-10, Sum P(2) = 1.4e-10
Identities = 29/93 (31%), Positives = 37/93 (39%)
Query: 202 CKCNGHASRCIKSPQ-GELVCECRHNTAGKDCEKCKPFFSDRPWGRATVYDANECKGGRC 260
C C A PQ G+ C CR T G C +C P + WG C+ RC
Sbjct: 2070 CACGPAAEGSECHPQSGQ--CHCRPGTMGPQCRECAPGY----WG----LPEQGCR--RC 2117
Query: 261 KCNGHASRCIKSPQGALVCECRHNTAGKDCEKC 293
+C G RC P C C +G+ C+ C
Sbjct: 2118 QCPG--GRC--DPHTGR-CNCPPGLSGERCDTC 2145
Score = 96 (38.9 bits), Expect = 1.4e-10, Sum P(2) = 1.4e-10
Identities = 29/104 (27%), Positives = 40/104 (38%)
Query: 201 RCKCNGHASRCIKSPQGELVCECRHNTAGKDCEKCKPFFSDRPWGRATVYDANECKGGR- 259
RC C + G C C+ G+ C++C+ + +G +D C G R
Sbjct: 2022 RCDCTPCGTEACDPHSGH--CLCKAGVTGRRCDRCQ----EGHFG----FDG--CGGCRP 2069
Query: 260 CKCNGHASRCIKSPQGALVCECRHNTAGKDCEKCKPFFSDRPWG 303
C C A PQ C CR T G C +C P + WG
Sbjct: 2070 CACGPAAEGSECHPQSGQ-CHCRPGTMGPQCRECAPGY----WG 2108
Score = 94 (38.1 bits), Expect = 2.3e-10, Sum P(2) = 2.3e-10
Identities = 27/94 (28%), Positives = 37/94 (39%)
Query: 201 RCKCN--GHASRCIKSPQGELVCECRHNTAGKDCEKCKPFFSDRPWGRATVYDANECKGG 258
RC C+ G + G C C+ + G+ C CK F +G D C+
Sbjct: 775 RCSCDLRGTLGGVAECQPGTGQCFCKPHVCGQACASCKDGF----FGLDQA-DYFGCRSC 829
Query: 259 RCKCNGHASRCIKSPQGALVCECRHNTAGKDCEK 292
RC G + + G VC CR NT G C +
Sbjct: 830 RCDIGGALGQSCEPRTG--VCRCRPNTQGPTCSE 861
Score = 94 (38.1 bits), Expect = 2.3e-10, Sum P(2) = 2.3e-10
Identities = 31/110 (28%), Positives = 46/110 (41%)
Query: 201 RCKCNGHAS--RCIKSPQGELVCECRHNTAGKDCEKCKPFFSDRPWGRATVYDANECK-- 256
RC C + C + G C CR N +G+ C+ C F+ P T +N+ +
Sbjct: 428 RCNCESDFTDGTC-EDLTGR--CYCRPNFSGERCDVCAEGFTGFPSCYPTPSSSNDTREQ 484
Query: 257 ---GGR---CKCNGHASR---CIKSPQGALVCECRHNTAGKDCEKCKPFF 297
G+ C C+ ++ C K P+ C C+ N G CE C P F
Sbjct: 485 VLPAGQIVNCDCSAAGTQGNACRKDPRVGR-CLCKPNFQGTHCELCAPGF 533
Score = 92 (37.4 bits), Expect = 3.7e-10, Sum P(2) = 3.7e-10
Identities = 24/95 (25%), Positives = 37/95 (38%)
Query: 202 CKCNGHASRCIKSPQGEL---VCECRHNTAGKDCEKCKPFFSDRPWGRATVYDANECKGG 258
C C+G + + P + C+CR N G+ C+ C P F P R D +E
Sbjct: 1528 CNCSGPGIQELTDPTCDTDSGQCKCRPNVTGRRCDTCSPGFHGYP--RCRPCDCHEAGTA 1585
Query: 259 RCKCNGHASRCIKSPQGALVCECRHNTAGKDCEKC 293
C+ +C C+ N G C++C
Sbjct: 1586 PGVCDPLTGQCY----------CKENVQGPKCDQC 1610
Score = 86 (35.3 bits), Expect = 1.5e-09, Sum P(2) = 1.5e-09
Identities = 30/114 (26%), Positives = 45/114 (39%)
Query: 202 CKCNGHASRCIKSPQGELVCECRHNTAGKDCEKCKPFFSDRPWGRATVYDANECKGGRCK 261
C C +R G+ +C R T DC C+P + +G + EC
Sbjct: 1484 CDCG---ARLCDELTGQCICPPR--TIPPDCLLCQP----QTFGCHPLVGCEECN----- 1529
Query: 262 CNGHASRCIKSPQ---GALVCECRHNTAGKDCEKCKPFFSDRPWGRATVYDANE 312
C+G + + P + C+CR N G+ C+ C P F P R D +E
Sbjct: 1530 CSGPGIQELTDPTCDTDSGQCKCRPNVTGRRCDTCSPGFHGYP--RCRPCDCHE 1581
Score = 75 (31.5 bits), Expect = 2.1e-08, Sum P(2) = 2.1e-08
Identities = 30/111 (27%), Positives = 45/111 (40%)
Query: 202 CKCN--GHAS-RCIKSPQGELVCECRHNTAGKDCEKCKPFFSDRPWGRATVYDANECKGG 258
C+C+ G A RC G+ C CR G C++C P + P C+
Sbjct: 541 CQCSSPGVADDRC-DPDTGQ--CRCRVGFEGATCDRCAPGYFHFPL----------CQ-- 585
Query: 259 RCKCNGHASRCIKSPQGALVCECRHNTAGKDCEKCKPFFSDRPWGRATVYD 309
C C+ A + A C C+ AG C++C+P + P +A D
Sbjct: 586 LCGCSP-AGTLPEGCDEAGRCLCQPEFAGPHCDRCRPGYHGFPNCQACTCD 635
Score = 67 (28.6 bits), Expect = 1.4e-07, Sum P(2) = 1.4e-07
Identities = 21/81 (25%), Positives = 33/81 (40%)
Query: 221 CECRHNTAGKDCEKCKPFFSDRPWGRATVYDANECKGGRCKCNGHASRCIKSPQ----GA 276
C C + G+DC +C + WG + C G C+ +CI P+
Sbjct: 1457 CPCHAHVIGRDCSRCATGY----WGFP---NCRPCDCGARLCDELTGQCICPPRTIPPDC 1509
Query: 277 LVCECR----HNTAGKDCEKC 293
L+C+ + H G CE+C
Sbjct: 1510 LLCQPQTFGCHPLVG--CEEC 1528
Score = 67 (28.6 bits), Expect = 1.4e-07, Sum P(2) = 1.4e-07
Identities = 30/108 (27%), Positives = 48/108 (44%)
Query: 202 CKCNGHASR---CIKSPQ-GELVCECRHNTAGKDCEKCKP-FFSD--RPWGRATVYDANE 254
C C+ ++ C K P+ G C C+ N G CE C P F+ +P ++ A++
Sbjct: 494 CDCSAAGTQGNACRKDPRVGR--CLCKPNFQGTHCELCAPGFYGPGCQPCQCSSPGVADD 551
Query: 255 -CKG--GRCKCN-G-HASRCIKSPQGAL---VCE-CRHNTAGKDCEKC 293
C G+C+C G + C + G +C+ C + AG E C
Sbjct: 552 RCDPDTGQCRCRVGFEGATCDRCAPGYFHFPLCQLCGCSPAGTLPEGC 599
Score = 65 (27.9 bits), Expect = 2.2e-07, Sum P(2) = 2.2e-07
Identities = 23/76 (30%), Positives = 31/76 (40%)
Query: 201 RCK-CNGHASRCIKSPQGELV--CECRHNTAGKDCEKCKPFFSDRPWGRATVYDANECKG 257
RC+ C+ H + L C C+ N G C++C G ++ DA KG
Sbjct: 1573 RCRPCDCHEAGTAPGVCDPLTGQCYCKENVQGPKCDQCS-------LGTFSL-DAANPKG 1624
Query: 258 -GRCKCNGHASRCIKS 272
RC C G RC S
Sbjct: 1625 CTRCFCFGATERCRSS 1640
Score = 58 (25.5 bits), Expect = 1.2e-06, Sum P(2) = 1.2e-06
Identities = 32/133 (24%), Positives = 47/133 (35%)
Query: 177 ATGVISRGNEQEALCTDRHKKQGGRC-KCN-GHASRCIKSPQGELVCECRHN-TAGKDCE 233
A G + RG + LC + G C +C G + C+C N
Sbjct: 1925 AEGCVLRGGRTQCLCKPGYA--GASCERCAPGFFGNPLVLGSSCQPCDCSGNGDPNLLFS 1982
Query: 234 KCKPFFSD-RPWGRATVYDANE-CK-G--GRCKCNGHASRCIKSPQGALVCE-------C 281
C P R R T E C G G G+ +RC +P G C+ C
Sbjct: 1983 DCDPLTGACRGCLRHTTGPRCEICAPGFYGNALLPGNCTRCDCTPCGTEACDPHSGHCLC 2042
Query: 282 RHNTAGKDCEKCK 294
+ G+ C++C+
Sbjct: 2043 KAGVTGRRCDRCQ 2055
Score = 50 (22.7 bits), Expect = 7.7e-06, Sum P(2) = 7.7e-06
Identities = 13/39 (33%), Positives = 18/39 (46%)
Query: 257 GGR-CKCNG-HASRCIKSPQGALVCECRHNTAGKDCEKC 293
G R C C+ A+ P G C C + G+DC +C
Sbjct: 1434 GARPCGCHEVGATGPTCEPFGGQ-CPCHAHVIGRDCSRC 1471
Score = 39 (18.8 bits), Expect = 0.00010, Sum P(2) = 0.00010
Identities = 10/37 (27%), Positives = 14/37 (37%)
Query: 190 LCTD-RHKKQGGRC-KCNGHASRCIKSPQGELV-CEC 223
+C D +H +G C +C P V C C
Sbjct: 1879 VCVDCQHNTEGAHCERCQAGFVSSRDDPSAPCVSCPC 1915
>ZFIN|ZDB-GENE-081030-4 [details] [associations]
symbol:lamb2 "laminin, beta 2 (laminin S)"
species:7955 "Danio rerio" [GO:0016203 "muscle attachment"
evidence=IMP] [GO:0070831 "basement membrane assembly"
evidence=IMP] [GO:0061053 "somite development" evidence=IMP]
ZFIN:ZDB-GENE-081030-4 InterPro:IPR013032 PROSITE:PS00022
InterPro:IPR002049 Pfam:PF00053 SMART:SM00180 PROSITE:PS01248
PROSITE:PS50027 InterPro:IPR008211 Pfam:PF00055 SMART:SM00136
PROSITE:PS51117 eggNOG:NOG241384 HOGENOM:HOG000007552
GeneTree:ENSGT00620000087753 InterPro:IPR013015 PROSITE:PS51116
HOVERGEN:HBG052301 CTD:3913 KO:K06243 OrthoDB:EOG4KSPHW
EMBL:AL953864 IPI:IPI00499348 RefSeq:NP_001229974.1
UniGene:Dr.158661 UniGene:Dr.78258 Ensembl:ENSDART00000012166
Ensembl:ENSDART00000147326 GeneID:337767 KEGG:dre:337767
NextBio:20812405 Uniprot:B7ZDA6
Length = 1782
Score = 232 (86.7 bits), Expect = 5.4e-30, Sum P(2) = 5.4e-30
Identities = 47/119 (39%), Positives = 66/119 (55%)
Query: 200 GRCKCNGHASRC--IKSPQGELV------CECRHNTAGKDCEKCKPFFSDRPWGRATVYD 251
G C C GHAS C I+ + ++ C C+HNT G +CE+C F++D PW A +
Sbjct: 265 GNCFCYGHASECAPIEGIRDDIEGMVHGRCVCKHNTKGLNCEQCDDFYNDLPWRPAEGRN 324
Query: 252 ANECKGGRCKCNGHASRC-----IKSPQGAL---VCE-CRHNTAGKDCEKCKPFFSDRP 301
N CK +C CNGH+++C + G + VC+ C HNT G +CE CKPF+ P
Sbjct: 325 TNACK--KCNCNGHSNQCHFDMAVYLATGNISGGVCDNCLHNTMGSNCESCKPFYYQDP 381
Score = 163 (62.4 bits), Expect = 7.5e-19, Sum P(2) = 7.5e-19
Identities = 38/115 (33%), Positives = 52/115 (45%)
Query: 201 RCKCNGHASRC-----IKSPQGEL---VCE-CRHNTAGKDCEKCKPFFSDRPWGRATVYD 251
+C CNGH+++C + G + VC+ C HNT G +CE CKPF+ P + D
Sbjct: 330 KCNCNGHSNQCHFDMAVYLATGNISGGVCDNCLHNTMGSNCESCKPFYYQDP--TRDIRD 387
Query: 252 ANECKGGRCK---------CNGHASRCIKSPQGALVCECRHNTAGKDCEKCKPFF 297
C C C+GH + G C C+ N G C+KCKP F
Sbjct: 388 PGVCVACDCDPDGSKNGGVCDGHDDPSLGMIAGQ--CRCKDNVEGSRCDKCKPGF 440
Score = 146 (56.5 bits), Expect = 5.4e-30, Sum P(2) = 5.4e-30
Identities = 45/193 (23%), Positives = 87/193 (45%)
Query: 11 LLIGAVCGEKIDLNSDPCYENGRPR-RCIPDFVNAAFGQE--VKVNSVCGLESPERYCDT 67
LL+ ++C +P +G C P + G+E +K +S CGL E YC
Sbjct: 4 LLLLSICVLSAVSAQEPDAAHGCTHGSCYPATGDLLVGREANLKASSTCGLRRREPYCIV 63
Query: 68 SGA-----CHVCDAGSPRGRFPAEYLTDLNNPSNVTCWRSEAQTSVNSLSASPDNVTLTL 122
S C CD+ P P + +T ++ + S +V L L
Sbjct: 64 SHLQEEKKCFQCDSRRPYD--PQSNPVSHRIENVITTFKPHRKKSWWQSENGKSDVYLQL 121
Query: 123 SLGKKFELTYISLSFCPKSIKPDSLAIYKSQDFGKSWQPLQFYSSQCKKLYGRTATGVIS 182
L +F T++ ++F K+ +P ++ I +S DFG+SWQ +++++ C+ ++ + +
Sbjct: 122 DLEAEFHFTHLIMTF--KTFRPAAMLIERSADFGRSWQVYRYFANDCESIFPGISQDSLR 179
Query: 183 RGNEQEALCTDRH 195
+ ++ +C R+
Sbjct: 180 KVDD--VICESRY 190
Score = 139 (54.0 bits), Expect = 3.7e-16, Sum P(2) = 3.7e-16
Identities = 34/108 (31%), Positives = 48/108 (44%)
Query: 202 CKCNGHASRCIKSPQGELVCECRHNTAGKDCEKCKPFFSDRP-WGRATVYDANECKGGRC 260
C+CNGHA C + L CR NTAG CE+C + P G + C G
Sbjct: 861 CQCNGHADECHQRTGACL--NCRSNTAGDKCERCANGYYGNPVLGLGSQCRPCPCPEGPN 918
Query: 261 KCNGHASRCIKSPQGA-LVCECRHNTAGKDCEKCKP-FFSD--RPWGR 304
A+ C + + +VC C G C++C P +F D +P G+
Sbjct: 919 SGRHFAASCYQDNRSQQVVCNCNQGYTGPRCDECAPGYFGDPSKPGGQ 966
Score = 135 (52.6 bits), Expect = 9.7e-16, Sum P(2) = 9.7e-16
Identities = 27/65 (41%), Positives = 35/65 (53%)
Query: 258 GRCKCNGHASRC-----IKSPQGALV---CECRHNTAGKDCEKCKPFFSDRPWGRATVYD 309
G C C GHAS C I+ +V C C+HNT G +CE+C F++D PW A +
Sbjct: 265 GNCFCYGHASECAPIEGIRDDIEGMVHGRCVCKHNTKGLNCEQCDDFYNDLPWRPAEGRN 324
Query: 310 ANECK 314
N CK
Sbjct: 325 TNACK 329
Score = 127 (49.8 bits), Expect = 6.6e-15, Sum P(2) = 6.6e-15
Identities = 39/123 (31%), Positives = 57/123 (46%)
Query: 198 QGGRCKCNGHAS--RCIK--------SPQGELVCECR-HNTAGKDCE------KCKP-FF 239
+GG+C+C + S RC K P G +CEC + + C+ C+P +
Sbjct: 782 RGGQCRCRPNISGRRCEKCAPGAYGFGPSGCKLCECSLEGSQSRFCDLYSGQCPCRPGAY 841
Query: 240 SDRPWG-RATVYDANECKGGRCKCNGHASRCIKSPQGALVCECRHNTAGKDCEKCKPFFS 298
R G +A + C+ C+CNGHA C + GA + CR NTAG CE+C +
Sbjct: 842 GQRCDGCQAGHWGFPNCRP--CQCNGHADECHQRT-GACL-NCRSNTAGDKCERCANGYY 897
Query: 299 DRP 301
P
Sbjct: 898 GNP 900
Score = 121 (47.7 bits), Expect = 2.8e-14, Sum P(2) = 2.8e-14
Identities = 40/147 (27%), Positives = 57/147 (38%)
Query: 169 CKKLYGRTATGVISRGNEQEAL-CTDRHKKQGGRCKCNGHASRCIKSPQGELVCECRHNT 227
CK Y + T I A C K GG C+GH + G+ C C+ N
Sbjct: 373 CKPFYYQDPTRDIRDPGVCVACDCDPDGSKNGG--VCDGHDDPSLGMIAGQ--CRCKDNV 428
Query: 228 AGKDCEKCKPFFSDRPWGRATVYDANECKGGRCKCNGHASRCIKSPQGALVCECRHNTAG 287
G C+KCKP F +G + D C+ +C G S + + C C+ G
Sbjct: 429 EGSRCDKCKPGF----FG-LSASDPRGCQPCKCDPRGTVSGSSQCDPVSGDCFCKRLVTG 483
Query: 288 KDCEKCKPFFSDRPWGRATVYDANECK 314
C +C P W A +D + C+
Sbjct: 484 HSCNQCLP----EHW--ALSHDTSGCR 504
Score = 101 (40.6 bits), Expect = 3.3e-12, Sum P(2) = 3.3e-12
Identities = 28/93 (30%), Positives = 38/93 (40%)
Query: 202 CKCNGHASRCIKSPQGELVCECRHNTAGKDCEKCKPFFSDRPWGRATVYDANECKGGRCK 261
C+C+ S + C CR N +G+ CEKC P G A + + CK C
Sbjct: 767 CECDPQGSLSSECDVRGGQCRCRPNISGRRCEKCAP-------G-AYGFGPSGCKLCECS 818
Query: 262 CNGHASRCIKSPQGALVCECRHNTAGKDCEKCK 294
G SR G C CR G+ C+ C+
Sbjct: 819 LEGSQSRFCDLYSGQ--CPCRPGAYGQRCDGCQ 849
Score = 98 (39.6 bits), Expect = 6.7e-12, Sum P(2) = 6.7e-12
Identities = 29/100 (29%), Positives = 45/100 (45%)
Query: 208 ASRCIKSPQGE-LVCECRHNTAGKDCEKCKP-FFSD--RPWGRATVYDANECKGGRCKCN 263
A+ C + + + +VC C G C++C P +F D +P G +C+ RC N
Sbjct: 924 AASCYQDNRSQQVVCNCNQGYTGPRCDECAPGYFGDPSKPGG--------QCQPCRCSNN 975
Query: 264 GHAS---RCIKSPQGALVCECRHNTAGKDCEKCKP-FFSD 299
S C K L +C +NT G DC C+ ++ D
Sbjct: 976 IDLSDPESCDKRTGQCL--KCLYNTEGPDCSVCRSGYYGD 1013
Score = 94 (38.1 bits), Expect = 1.7e-11, Sum P(2) = 1.7e-11
Identities = 35/132 (26%), Positives = 56/132 (42%)
Query: 197 KQGGRCK-CNGHASRCIKSPQ------GELVCECRHNTAGKDCEKCKPFFSDRPWGRATV 249
K GG+C+ C + + P+ G+ + +C +NT G DC C+ + +G A+
Sbjct: 962 KPGGQCQPCRCSNNIDLSDPESCDKRTGQCL-KCLYNTEGPDCSVCRSGY----YGDAS- 1015
Query: 250 YDANECKGGRCKCN--G-HASRCIKSP----QGAL-VCECRHNTAGKDCEKCKPFFSDRP 301
C+ +C CN G S+C+ Q A C+C N G+ C+ C P
Sbjct: 1016 --RRNCR--KCTCNFLGTERSQCLSRDDCVCQRATGQCQCLPNVIGQTCDHCAP----NS 1067
Query: 302 WGRATVYDANEC 313
W A+ C
Sbjct: 1068 WNLASGQGCEPC 1079
Score = 89 (36.4 bits), Expect = 5.7e-11, Sum P(2) = 5.7e-11
Identities = 25/94 (26%), Positives = 37/94 (39%)
Query: 202 CKCNGHASRCIKSPQGELV---CECRHNTAGKDCEKCKPFFSDRPWGRATVYDANECKGG 258
CKC+ + S Q + V C C+ G C +C P W A +D + C+G
Sbjct: 454 CKCDPRGT-VSGSSQCDPVSGDCFCKRLVTGHSCNQCLP----EHW--ALSHDTSGCRGC 506
Query: 259 RCKCNGHASRCIKSPQGALVCECRHNTAGKDCEK 292
C G G C+CR + G+ C +
Sbjct: 507 DCDVGGATENQCSMETGQ--CQCRSHMIGRQCNQ 538
Score = 89 (36.4 bits), Expect = 5.7e-11, Sum P(2) = 5.7e-11
Identities = 29/101 (28%), Positives = 43/101 (42%)
Query: 202 CKC---NGHASRCIKSPQGELVCECRHNTAGKDCEKCKPFFSDRPWGRATVYDANECKGG 258
C C N + S C + G+ C+CR GK C C+ + WG V C+
Sbjct: 1079 CACDPNNAYTSACNEFT-GQ--CQCRVGFGGKTCTDCQ----ENHWGDPRVL----CRAC 1127
Query: 259 RCKCNG-HASRCIKSPQGALVCECRHNTAGKDCEKCKPFFS 298
C G +S+C + G C C+ +G C++C FS
Sbjct: 1128 DCDPRGIESSQCNRMT-GH--CVCQQGVSGVRCDQCARGFS 1165
Score = 89 (36.4 bits), Expect = 5.7e-11, Sum P(2) = 5.7e-11
Identities = 32/122 (26%), Positives = 48/122 (39%)
Query: 193 DRHKKQGGRCKCN--G-HASRCIKSP-----QGELVCECRHNTAGKDCEKCKPFFSDRPW 244
D ++ +C CN G S+C+ + C+C N G+ C+ C P W
Sbjct: 1013 DASRRNCRKCTCNFLGTERSQCLSRDDCVCQRATGQCQCLPNVIGQTCDHCAP----NSW 1068
Query: 245 GRATVYDANECKGGRCKC---NGHASRCIKSPQGALVCECRHNTAGKDCEKCKPFFSDRP 301
A+ C+ C C N + S C + G C+CR GK C C+ +
Sbjct: 1069 NLAS---GQGCEP--CACDPNNAYTSACNEFT-GQ--CQCRVGFGGKTCTDCQ----ENH 1116
Query: 302 WG 303
WG
Sbjct: 1117 WG 1118
Score = 73 (30.8 bits), Expect = 2.6e-09, Sum P(2) = 2.6e-09
Identities = 13/36 (36%), Positives = 18/36 (50%)
Query: 260 CKCNGHASRCIKSPQGALVCECRHNTAGKDCEKCKP 295
C+C+ S + C CR N +G+ CEKC P
Sbjct: 767 CECDPQGSLSSECDVRGGQCRCRPNISGRRCEKCAP 802
>UNIPROTKB|F1SQR3 [details] [associations]
symbol:NTN4 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0060668 "regulation of branching involved in salivary
gland morphogenesis by extracellular matrix-epithelial cell
signaling" evidence=IEA] [GO:0043237 "laminin-1 binding"
evidence=IEA] [GO:0016322 "neuron remodeling" evidence=IEA]
[GO:0005576 "extracellular region" evidence=IEA] InterPro:IPR001134
PROSITE:PS50189 GO:GO:0016322 InterPro:IPR002049 InterPro:IPR008993
Pfam:PF00053 SMART:SM00180 SUPFAM:SSF50242 PROSITE:PS01248
PROSITE:PS50027 GO:GO:0005604 InterPro:IPR018933 Pfam:PF01759
SMART:SM00643 InterPro:IPR008211 Pfam:PF00055 SMART:SM00136
PROSITE:PS51117 GeneTree:ENSGT00700000104042 KO:K06845 OMA:RSQDFGK
GO:GO:0060668 EMBL:CU442719 RefSeq:XP_003481795.1
Ensembl:ENSSSCT00000000980 GeneID:100516554 KEGG:ssc:100516554
Uniprot:F1SQR3
Length = 628
Score = 227 (85.0 bits), Expect = 5.6e-30, Sum P(2) = 5.6e-30
Identities = 52/129 (40%), Positives = 68/129 (52%)
Query: 200 GRCKCNGHASRCI--------KSPQGELV----CECRHNTAGKDCEKCKPFFSDRPWGRA 247
G C CNGHA +C+ K+P V C C+HNTAG C+ C P ++DRPW A
Sbjct: 260 GSCFCNGHADQCVPVDGFKPVKAPGAFHVVHGKCMCKHNTAGTHCQHCAPLYNDRPWEAA 319
Query: 248 T--VYDANECKGGRCKCNGHASRC-----IKSPQGAL---VC-ECRHNTAGKDCEKCKP- 295
EC+ CKCNGHA C + G VC +C+HNT G+ C++CKP
Sbjct: 320 DGKTGSPKECR--TCKCNGHADACHFDINVWEASGNRSGGVCNDCQHNTEGQHCQRCKPG 377
Query: 296 FFSD--RPW 302
F+ D RP+
Sbjct: 378 FYRDLRRPF 386
Score = 153 (58.9 bits), Expect = 5.6e-30, Sum P(2) = 5.6e-30
Identities = 45/171 (26%), Positives = 77/171 (45%)
Query: 35 RRCIPDFVNAAFGQEVKVNSVCGLESPERYCDTSG---------ACHVCDAGSPR-GRFP 84
+ C P N A G+++ ++ CG + E YC S C C+A P P
Sbjct: 32 KACNPQMGNLALGRKLWADTTCGQNATELYCFYSENTDLTCQQPKCDKCNAAQPHLAHLP 91
Query: 85 AEYLTDLNNPSNVTCWRSEAQTSVNSLSASPDNVTLTLSLGKKFELTYISLSFCPKSIKP 144
A + D + T W+S + L L +F T++ + F KS +P
Sbjct: 92 AA-MADSSFRFPRTWWQSAEDVHREKIQ---------LDLEAEFYFTHLIMVF--KSPRP 139
Query: 145 DSLAIYKSQDFGKSWQPLQFYSSQCKKLYGRTATGVISRGNEQEALCTDRH 195
++ + +SQDFGK+W P +++++ C +G V+ +G A+CT R+
Sbjct: 140 AAMVLDRSQDFGKTWMPYKYFATNCSATFG-LEDDVVKKG----AICTSRY 185
Score = 137 (53.3 bits), Expect = 7.0e-18, Sum P(2) = 7.0e-18
Identities = 31/86 (36%), Positives = 43/86 (50%)
Query: 232 CEKCKPFFSDRPWGRATVYDANECKGGRCKCNGHASRCI--------KSPQGALV----C 279
C++ P + + +YD KG C CNGHA +C+ K+P V C
Sbjct: 236 CQRNDPNAKPQHFTHYAIYDFI-VKGS-CFCNGHADQCVPVDGFKPVKAPGAFHVVHGKC 293
Query: 280 ECRHNTAGKDCEKCKPFFSDRPWGRA 305
C+HNTAG C+ C P ++DRPW A
Sbjct: 294 MCKHNTAGTHCQHCAPLYNDRPWEAA 319
Score = 134 (52.2 bits), Expect = 1.4e-17, Sum P(2) = 1.4e-17
Identities = 41/116 (35%), Positives = 54/116 (46%)
Query: 197 KQGGRCKCNGHASRC-----IKSPQGEL---VC-ECRHNTAGKDCEKCKP-FFSD--RPW 244
K+ CKCNGHA C + G VC +C+HNT G+ C++CKP F+ D RP+
Sbjct: 327 KECRTCKCNGHADACHFDINVWEASGNRSGGVCNDCQHNTEGQHCQRCKPGFYRDLRRPF 386
Query: 245 GRATVYDANECKGGRCKCN--GHASRCIKS-----PQGALVCECRHNTAGKDCEKC 293
DA CK C C+ G A S P C C+ AG C++C
Sbjct: 387 SAP---DA--CK--LCSCHPVGSAVLPFSSVTFCDPSNG-DCPCKPGVAGPHCDRC 434
Score = 40 (19.1 bits), Expect = 7.8e-08, Sum P(2) = 7.8e-08
Identities = 12/52 (23%), Positives = 22/52 (42%)
Query: 221 CECRHNTAGKDCEKCKPFFSDRPWGRATVYDANECKGGRCKCNGHASRCIKS 272
CEC+ G C+ +S + + A++ KG + N + +KS
Sbjct: 506 CECKEQVLGNSKAFCRMKYSYVL--KIKILSAHD-KGSHAEVNVKIKKVLKS 554
Score = 37 (18.1 bits), Expect = 2.4e-05, Sum P(2) = 2.4e-05
Identities = 5/12 (41%), Positives = 8/12 (66%)
Query: 28 CYENGRPRRCIP 39
C+ NG +C+P
Sbjct: 262 CFCNGHADQCVP 273
>RGD|2988 [details] [associations]
symbol:Lamb2 "laminin, beta 2" species:10116 "Rattus norvegicus"
[GO:0000904 "cell morphogenesis involved in differentiation"
evidence=ISO] [GO:0005178 "integrin binding" evidence=ISO]
[GO:0005604 "basement membrane" evidence=IEA;ISO] [GO:0005605 "basal
lamina" evidence=ISO] [GO:0005608 "laminin-3 complex" evidence=ISO]
[GO:0007155 "cell adhesion" evidence=IEA] [GO:0007411 "axon guidance"
evidence=ISO] [GO:0007528 "neuromuscular junction development"
evidence=ISO] [GO:0007601 "visual perception" evidence=ISO]
[GO:0014002 "astrocyte development" evidence=ISO] [GO:0014044
"Schwann cell development" evidence=ISO] [GO:0031175 "neuron
projection development" evidence=ISO] [GO:0043256 "laminin complex"
evidence=ISO] [GO:0045202 "synapse" evidence=ISO] [GO:0048677 "axon
extension involved in regeneration" evidence=ISO] [GO:0050808
"synapse organization" evidence=ISO] [GO:0060041 "retina development
in camera-type eye" evidence=ISO] [GO:0072249 "metanephric glomerular
visceral epithelial cell development" evidence=ISO] [GO:0072274
"metanephric glomerular basement membrane development" evidence=ISO]
[GO:0031012 "extracellular matrix" evidence=ISO] RGD:2988
GO:GO:0007155 PROSITE:PS00022 PROSITE:PS01186 InterPro:IPR002049
Pfam:PF00053 SMART:SM00180 PROSITE:PS01248 PROSITE:PS50027
GO:GO:0005604 InterPro:IPR008211 Pfam:PF00055 SMART:SM00136
PROSITE:PS51117 InterPro:IPR013015 PROSITE:PS51116 HOVERGEN:HBG052301
CTD:3913 KO:K06243 EMBL:X16563 IPI:IPI00212868 PIR:S03539
RefSeq:NP_037106.1 UniGene:Rn.774 ProteinModelPortal:P15800
PhosphoSite:P15800 PRIDE:P15800 GeneID:25473 KEGG:rno:25473
NextBio:606781 Genevestigator:P15800 Uniprot:P15800
Length = 1801
Score = 232 (86.7 bits), Expect = 1.8e-29, Sum P(2) = 1.8e-29
Identities = 47/119 (39%), Positives = 67/119 (56%)
Query: 200 GRCKCNGHASRCIKSP------QGEL--VCECRHNTAGKDCEKCKPFFSDRPWGRATVYD 251
G C C GHAS+C +P +G + C C+HNT G +CE+C+ F+ D PW A
Sbjct: 284 GNCFCYGHASQCAPAPGAPAHAEGMVHGACICKHNTRGLNCEQCQDFYQDLPWHPAEDGH 343
Query: 252 ANECKGGRCKCNGHASRC-----IKSPQGAL---VCE-CRHNTAGKDCEKCKPFFSDRP 301
+ C+ +C+CNGH+ C + G + VC+ C+HNTAG+ CE C+PFF P
Sbjct: 344 THACR--KCECNGHSHSCHFDMAVYLASGNVSGGVCDGCQHNTAGRHCELCRPFFYRDP 400
Score = 150 (57.9 bits), Expect = 8.1e-17, Sum P(2) = 8.1e-17
Identities = 39/121 (32%), Positives = 55/121 (45%)
Query: 193 DRHKKQGGRCKCNGHASRC-----IKSPQGEL---VCE-CRHNTAGKDCEKCKPFFSDRP 243
D H +C+CNGH+ C + G + VC+ C+HNTAG+ CE C+PFF P
Sbjct: 341 DGHTHACRKCECNGHSHSCHFDMAVYLASGNVSGGVCDGCQHNTAGRHCELCRPFFYRDP 400
Query: 244 WGRATVYDANECKGGRCKCNGH--ASRCIK--SPQGALV---CECRHNTAGKDCEKCKPF 296
+ D C+ C G RC P LV C C+ + G C++C+
Sbjct: 401 --TKDMRDPAACRPCDCDPMGSQDGGRCDSHDDPVLGLVSGQCRCKEHVVGTRCQQCRDG 458
Query: 297 F 297
F
Sbjct: 459 F 459
Score = 141 (54.7 bits), Expect = 1.8e-29, Sum P(2) = 1.8e-29
Identities = 38/141 (26%), Positives = 69/141 (48%)
Query: 37 CIPDFVNAAFGQ--EVKVNSVCGLESPERYCDTSGA-----CHVCDAGSPRGRFPAEYLT 89
C P + G+ + +S CGL SP+ YC S C +CD+ P F A
Sbjct: 50 CYPATGDLLVGRADRLTASSTCGLHSPQPYCIVSHLQDEKKCFLCDSRRP---FSARDNP 106
Query: 90 DLNNPSNV-TCWRSEAQTSVNSLSASPDNVTLTLSLGKKFELTYISLSFCPKSIKPDSLA 148
+ + NV T + + +T+ VT+ L L +F T++ ++F K+ +P ++
Sbjct: 107 NSHRIQNVVTSFAPQRRTAWWQSENGVPMVTIQLDLEAEFHFTHLIMTF--KTFRPAAML 164
Query: 149 IYKSQDFGKSWQPLQFYSSQC 169
+ +S DFG++W+ +++S C
Sbjct: 165 VERSADFGRTWRVYRYFSYDC 185
Score = 133 (51.9 bits), Expect = 5.9e-15, Sum P(2) = 5.9e-15
Identities = 25/65 (38%), Positives = 36/65 (55%)
Query: 258 GRCKCNGHASRCIKSP------QGAL--VCECRHNTAGKDCEKCKPFFSDRPWGRATVYD 309
G C C GHAS+C +P +G + C C+HNT G +CE+C+ F+ D PW A
Sbjct: 284 GNCFCYGHASQCAPAPGAPAHAEGMVHGACICKHNTRGLNCEQCQDFYQDLPWHPAEDGH 343
Query: 310 ANECK 314
+ C+
Sbjct: 344 THACR 348
Score = 108 (43.1 bits), Expect = 2.3e-12, Sum P(2) = 2.3e-12
Identities = 32/104 (30%), Positives = 43/104 (41%)
Query: 218 ELVCECRHNTAGKDCEKCKP-FFSD--RPWGRATVYDANECKGG-----RCKCNGHASRC 269
++VC CR G CE C P F D +P GR + EC G C+ H +C
Sbjct: 954 QIVCHCRAGYTGLRCEACAPGHFGDPSKPGGRCQLC---ECSGNIDPTDPGACDPHTGQC 1010
Query: 270 IKSPQGALVCECRHNTAGKDCEKCKPFFSDRPWGRATVYDANEC 313
++ C H+T G C CKP F G+A + C
Sbjct: 1011 LR---------CLHHTEGPHCGHCKPGFH----GQAARQSCHRC 1041
Score = 102 (41.0 bits), Expect = 9.7e-12, Sum P(2) = 9.7e-12
Identities = 26/107 (24%), Positives = 46/107 (42%)
Query: 191 CTDRHKKQGGRCKCNGHASRCIKSPQGELVCECRHNTAGKDCEKCKPFFSDRPWGRATVY 250
C + GGRC + H + G+ C C+ + G C++C+ F +G +
Sbjct: 415 CDPMGSQDGGRC--DSHDDPVLGLVSGQ--CRCKEHVVGTRCQQCRDGF----FG-LSAS 465
Query: 251 DANECKGGRCKCNGHASRCIKSP--QGALVCECRHNTAGKDCEKCKP 295
+ C+ RC+CN + +P + C C+ G C++C P
Sbjct: 466 NPRGCQ--RCQCNSRGTVPGGTPCDSSSGTCFCKRLVTGDGCDRCLP 510
Score = 94 (38.1 bits), Expect = 6.5e-11, Sum P(2) = 6.5e-11
Identities = 36/122 (29%), Positives = 46/122 (37%)
Query: 197 KQGGRCK---CNGHASRCIKS---PQGELVCECRHNTAGKDCEKCKPFFSDRPWGRATVY 250
K GGRC+ C+G+ P C H+T G C CKP F G+A
Sbjct: 981 KPGGRCQLCECSGNIDPTDPGACDPHTGQCLRCLHHTEGPHCGHCKPGFH----GQAA-- 1034
Query: 251 DANECKGGRCKCN--G-HASRCIKSP-----QGALVCECRHNTAGKDCEKCKPFFSDRPW 302
C RC CN G RC + C C + G C++C P F +
Sbjct: 1035 -RQSCH--RCTCNLLGTDPQRCPSTDLCHCDPSTGQCPCLPHVQGLSCDRCAPNFWNFTS 1091
Query: 303 GR 304
GR
Sbjct: 1092 GR 1093
Score = 93 (37.8 bits), Expect = 8.3e-11, Sum P(2) = 8.3e-11
Identities = 27/104 (25%), Positives = 42/104 (40%)
Query: 201 RCKCNGHASRCIKSP--QGELVCECRHNTAGKDCEKCKPFFSDRPWGRATVYDANECKGG 258
RC+CN + +P C C+ G C++C P WG + +D C+
Sbjct: 472 RCQCNSRGTVPGGTPCDSSSGTCFCKRLVTGDGCDRCLPGH----WGLS--HDLLGCRPC 525
Query: 259 RCKCNGHASRCIKSPQGALVCECRHNTAGKDCEKCKPFFSDRPW 302
C G G C CR + G+ CE+ +P + RP+
Sbjct: 526 DCDVGGALDPQCDEATGQ--CPCRPHMIGRRCEQVQPGYF-RPF 566
Score = 81 (33.6 bits), Expect = 1.4e-09, Sum P(2) = 1.4e-09
Identities = 29/104 (27%), Positives = 41/104 (39%)
Query: 200 GR-CK-CNGHASRCIKSPQGELV--CECRHNTAGKDCEKCKPFFSDRPWGRATVYDANEC 255
GR C+ C H SR E C C G+ C +C+ WG + +C
Sbjct: 1092 GRGCQPCACHPSRARGPTCNEFTGQCHCHAGFGGRTCSECQELH----WGDPGL----QC 1143
Query: 256 KGGRCKCNG-HASRCIKSPQGALVCECRHNTAGKDCEKCKPFFS 298
+ C G +C +S G C CR +G C++C FS
Sbjct: 1144 RACDCDPRGIDKPQCHRST-GH--CSCRPGVSGVRCDQCARGFS 1184
>MGI|MGI:2159341 [details] [associations]
symbol:Ntng2 "netrin G2" species:10090 "Mus musculus"
[GO:0005886 "plasma membrane" evidence=IDA] [GO:0007275
"multicellular organismal development" evidence=IEA] [GO:0007399
"nervous system development" evidence=IEA] [GO:0007409
"axonogenesis" evidence=IDA] [GO:0016020 "membrane" evidence=IEA]
[GO:0030154 "cell differentiation" evidence=IEA] [GO:0031225
"anchored to membrane" evidence=IEA] [GO:0046658 "anchored to
plasma membrane" evidence=IDA] InterPro:IPR000742 Pfam:PF00008
PROSITE:PS50026 SMART:SM00181 MGI:MGI:2159341 InterPro:IPR013032
PROSITE:PS00022 GO:GO:0007409 PROSITE:PS01186 EMBL:CH466542
InterPro:IPR002049 Pfam:PF00053 SMART:SM00180 PROSITE:PS01248
PROSITE:PS50027 GO:GO:0046658 InterPro:IPR008211 Pfam:PF00055
SMART:SM00136 PROSITE:PS51117 GeneTree:ENSGT00700000104042
eggNOG:NOG286598 HOVERGEN:HBG052676 CTD:84628 HOGENOM:HOG000231614
KO:K16359 OrthoDB:EOG47D9FR EMBL:AB052336 EMBL:AB052337
EMBL:AB052338 EMBL:AF475079 EMBL:AF475080 EMBL:AL772379
IPI:IPI00311068 IPI:IPI00311069 IPI:IPI00625609 RefSeq:NP_598007.1
RefSeq:NP_598008.1 UniGene:Mm.442448 ProteinModelPortal:Q8R4F1
SMR:Q8R4F1 STRING:Q8R4F1 PRIDE:Q8R4F1 Ensembl:ENSMUST00000048455
Ensembl:ENSMUST00000091153 Ensembl:ENSMUST00000102873 GeneID:171171
KEGG:mmu:171171 InParanoid:A2AKX0 OMA:QPRCDPA ChiTaRS:NTNG2
NextBio:370580 Bgee:Q8R4F1 CleanEx:MM_NTNG2 Genevestigator:Q8R4F1
GermOnline:ENSMUSG00000035513 Uniprot:Q8R4F1
Length = 589
Score = 190 (71.9 bits), Expect = 1.9e-29, Sum P(3) = 1.9e-29
Identities = 61/211 (28%), Positives = 95/211 (45%)
Query: 4 LKLLCVPLLIGA--VCGEKIDLNSDPCYENGRPRRCIPDFVNAAFGQEVKVNS---VCGL 58
L L C+PL+ G +C + + P +E C P + +VKV CG
Sbjct: 7 LFLHCLPLVSGDYDICKSWVTTDEGPTWEF---YACQPKVMRLKDYVKVKVEPSGITCG- 62
Query: 59 ESPERYCDTSGA--C-HVCDAGSPRGRFPAEYLTDLNNPSNVTCWRSEAQTSVNSLSASP 115
+ PER+C C + CDA +P P + D + T W+S S SP
Sbjct: 63 DPPERFCSHENPYLCSNECDASNPDLAHPPRLMFDREDEGLATYWQSVTW----SRYPSP 118
Query: 116 DNVTLTLSLGKKFELTY-ISLSFCPKSIKPDSLAIYKSQDFGKSWQPLQFYSSQCKKLYG 174
+TLS K ELT + ++F + +P + + KS D G++WQP QFY+ C + +G
Sbjct: 119 LEANITLSWNKSVELTDDVVVTF--EYGRPTVMVLEKSLDNGRTWQPYQFYAEDCMEAFG 176
Query: 175 RTATGV--ISRGNEQEALCTDRHKKQGGRCK 203
+A +S + LCT+ + + G K
Sbjct: 177 MSARRARDMSPSSAHRVLCTEEYSRWAGSKK 207
Score = 148 (57.2 bits), Expect = 1.2e-23, Sum P(2) = 1.2e-23
Identities = 28/51 (54%), Positives = 32/51 (62%)
Query: 258 GRCKCNGHASRCIKSPQGALVCECRHNTAGKDCEKCKPFFSDRPWGRATVY 308
GRCKCN HA+ C +G+L CEC HNT G DC +CK F R W RA Y
Sbjct: 285 GRCKCNLHANLCTVR-EGSLQCECEHNTTGPDCGRCKKNFRTRAW-RAGSY 333
Score = 147 (56.8 bits), Expect = 1.9e-29, Sum P(3) = 1.9e-29
Identities = 28/51 (54%), Positives = 31/51 (60%)
Query: 200 GRCKCNGHASRCIKSPQGELVCECRHNTAGKDCEKCKPFFSDRPWGRATVY 250
GRCKCN HA+ C +G L CEC HNT G DC +CK F R W RA Y
Sbjct: 285 GRCKCNLHANLCTVR-EGSLQCECEHNTTGPDCGRCKKNFRTRAW-RAGSY 333
Score = 139 (54.0 bits), Expect = 1.1e-22, Sum P(2) = 1.1e-22
Identities = 35/99 (35%), Positives = 48/99 (48%)
Query: 202 CKCNGHASRCIKSPQGELV-C-ECRHNTAGKDCEKCKPFFSDRPWGRATVYDANECKGGR 259
C+C GH++RC +V C C+HNT G+ C+ C+ + G A + D N C
Sbjct: 413 CECYGHSNRCSYIDFLNVVTCVSCKHNTRGQHCQHCRLGYYRN--GSAELDDENVCI--E 468
Query: 260 CKCNGHAS---RCIKSPQGALVCECRHNTAGKDCEKCKP 295
C CN S RC ++ G CECR G C+ C P
Sbjct: 469 CNCNQIGSVHDRCNET--G--FCECREGAVGPKCDDCLP 503
Score = 92 (37.4 bits), Expect = 1.9e-29, Sum P(3) = 1.9e-29
Identities = 19/56 (33%), Positives = 29/56 (51%)
Query: 260 CKCNGHASRCIKSP-QGALVC-ECRHNTAGKDCEKCKPFFSDRPWGRATVYDANEC 313
C+C GH++RC + C C+HNT G+ C+ C+ + G A + D N C
Sbjct: 413 CECYGHSNRCSYIDFLNVVTCVSCKHNTRGQHCQHCRLGYYRN--GSAELDDENVC 466
>UNIPROTKB|F1NEW2 [details] [associations]
symbol:NTN1 "Netrin-1" species:9031 "Gallus gallus"
[GO:0005102 "receptor binding" evidence=IEA] [GO:0005576
"extracellular region" evidence=IEA] [GO:0005794 "Golgi apparatus"
evidence=IEA] InterPro:IPR001134 PROSITE:PS50189 GO:GO:0005794
GO:GO:0005576 InterPro:IPR002049 InterPro:IPR008993 Pfam:PF00053
SMART:SM00180 SUPFAM:SSF50242 PROSITE:PS01248 PROSITE:PS50027
InterPro:IPR018933 Pfam:PF01759 SMART:SM00643
GeneTree:ENSGT00700000104042 EMBL:AADN02049477 EMBL:AADN02049478
IPI:IPI01017205 Ensembl:ENSGALT00000014992 OMA:THKKACK
Uniprot:F1NEW2
Length = 336
Score = 325 (119.5 bits), Expect = 2.7e-29, P = 2.7e-29
Identities = 61/126 (48%), Positives = 77/126 (61%)
Query: 199 GGRCKCNGHASRCIKSPQGELVCECRHNTAGKDCEKCKPFFSDRPWGRATVYDANECKGG 258
GGRCKCNGHASRC+K + +LVC+C+HNT G +C++CKPF DRPW RA+ +ANEC
Sbjct: 14 GGRCKCNGHASRCVKDKEQKLVCDCKHNTEGPECDRCKPFHYDRPWQRASAREANECLA- 72
Query: 259 RCKCNGHASRC--------IKSPQGALVC-ECRHNTAGKDCEKCKP-FFSDRPWGRATVY 308
C CN HA RC + + VC CRHNTAG+ C CK F+ D ++
Sbjct: 73 -CNCNLHARRCRFNMELYKLSGRKSGGVCLNCRHNTAGRHCHYCKEGFYRDLS---KSIT 128
Query: 309 DANECK 314
D CK
Sbjct: 129 DRKACK 134
Score = 133 (51.9 bits), Expect = 3.7e-06, P = 3.7e-06
Identities = 36/110 (32%), Positives = 45/110 (40%)
Query: 202 CKCNGHASRC--------IKSPQGELVC-ECRHNTAGKDCEKCKP-FFSDRPWGRATVYD 251
C CN HA RC + + VC CRHNTAG+ C CK F+ D ++ D
Sbjct: 73 CNCNLHARRCRFNMELYKLSGRKSGGVCLNCRHNTAGRHCHYCKEGFYRDLS---KSITD 129
Query: 252 ANECKGGRCKCNGHASRCIKSPQGALVCECRHNTAGKDCEKC-KPFFSDR 300
CK C G A + G C C+ G C +C K F R
Sbjct: 130 RKACKACDCHPVGAAGKTCNQTTGQ--CPCKDGVTGLTCNRCAKGFQQSR 177
>UNIPROTKB|F1NK85 [details] [associations]
symbol:NTN1 "Netrin-1" species:9031 "Gallus gallus"
[GO:0005576 "extracellular region" evidence=IEA] InterPro:IPR001134
PROSITE:PS50189 GO:GO:0005576 InterPro:IPR002049 InterPro:IPR008993
Pfam:PF00053 SMART:SM00180 SUPFAM:SSF50242 PROSITE:PS01248
PROSITE:PS50027 InterPro:IPR018933 Pfam:PF01759 SMART:SM00643
GeneTree:ENSGT00700000104042 EMBL:AADN02049477 EMBL:AADN02049478
IPI:IPI00819575 Ensembl:ENSGALT00000039263 Uniprot:F1NK85
Length = 330
Score = 325 (119.5 bits), Expect = 2.7e-29, P = 2.7e-29
Identities = 61/126 (48%), Positives = 77/126 (61%)
Query: 199 GGRCKCNGHASRCIKSPQGELVCECRHNTAGKDCEKCKPFFSDRPWGRATVYDANECKGG 258
GGRCKCNGHASRC+K + +LVC+C+HNT G +C++CKPF DRPW RA+ +ANEC
Sbjct: 11 GGRCKCNGHASRCVKDKEQKLVCDCKHNTEGPECDRCKPFHYDRPWQRASAREANECLA- 69
Query: 259 RCKCNGHASRC--------IKSPQGALVC-ECRHNTAGKDCEKCKP-FFSDRPWGRATVY 308
C CN HA RC + + VC CRHNTAG+ C CK F+ D ++
Sbjct: 70 -CNCNLHARRCRFNMELYKLSGRKSGGVCLNCRHNTAGRHCHYCKEGFYRDLS---KSIT 125
Query: 309 DANECK 314
D CK
Sbjct: 126 DRKACK 131
Score = 133 (51.9 bits), Expect = 3.5e-06, P = 3.5e-06
Identities = 36/110 (32%), Positives = 45/110 (40%)
Query: 202 CKCNGHASRC--------IKSPQGELVC-ECRHNTAGKDCEKCKP-FFSDRPWGRATVYD 251
C CN HA RC + + VC CRHNTAG+ C CK F+ D ++ D
Sbjct: 70 CNCNLHARRCRFNMELYKLSGRKSGGVCLNCRHNTAGRHCHYCKEGFYRDLS---KSITD 126
Query: 252 ANECKGGRCKCNGHASRCIKSPQGALVCECRHNTAGKDCEKC-KPFFSDR 300
CK C G A + G C C+ G C +C K F R
Sbjct: 127 RKACKACDCHPVGAAGKTCNQTTGQ--CPCKDGVTGLTCNRCAKGFQQSR 174
>UNIPROTKB|F1MAN8 [details] [associations]
symbol:Lama5 "Protein Lama5" species:10116 "Rattus
norvegicus" [GO:0005102 "receptor binding" evidence=IEA]
[GO:0005606 "laminin-1 complex" evidence=IEA] [GO:0007155 "cell
adhesion" evidence=IEA] [GO:0030155 "regulation of cell adhesion"
evidence=IEA] [GO:0030334 "regulation of cell migration"
evidence=IEA] [GO:0045995 "regulation of embryonic development"
evidence=IEA] InterPro:IPR009254 InterPro:IPR010307 Pfam:PF06008
Pfam:PF06009 RGD:621023 GO:GO:0005615 GO:GO:0030155 GO:GO:0030324
GO:GO:0001755 InterPro:IPR013032 PROSITE:PS00022 GO:GO:0042127
Gene3D:2.60.120.200 InterPro:IPR008985 InterPro:IPR013320
SUPFAM:SSF49899 GO:GO:0030334 GO:GO:0001942 GO:GO:0007517
GO:GO:0007229 GO:GO:0042475 InterPro:IPR002049 InterPro:IPR001791
Pfam:PF00053 SMART:SM00180 SMART:SM00282 PROSITE:PS01248
PROSITE:PS50027 PROSITE:PS50025 GO:GO:0042384 GO:GO:0001738
GO:GO:0034446 GO:GO:0090002 GO:GO:0016331 GO:GO:0001658
GO:GO:0060445 Pfam:PF02210 GO:GO:0045995
GeneTree:ENSGT00700000104140 InterPro:IPR018031 InterPro:IPR000034
InterPro:IPR008211 Pfam:PF00052 Pfam:PF00055 SMART:SM00281
SMART:SM00136 PROSITE:PS51115 PROSITE:PS51117 GO:GO:0005606
OMA:LRHTTGP GO:GO:0043259 IPI:IPI00190577
Ensembl:ENSRNOT00000008981 ArrayExpress:F1MAN8 Uniprot:F1MAN8
Length = 3719
Score = 241 (89.9 bits), Expect = 2.8e-29, Sum P(2) = 2.8e-29
Identities = 51/122 (41%), Positives = 64/122 (52%)
Query: 199 GGRCKCNGHASRC-IKSPQG--ELVCECRHNTAGKDCEKCKPFFSDRPWGRATVYDANEC 255
GGRC C+GHA C K P L C C+HNT G C++C P F+ +PW AT ANEC
Sbjct: 301 GGRCVCHGHADVCDAKDPSDPFRLQCACQHNTCGGSCDRCCPGFNQQPWKPATTDSANEC 360
Query: 256 KGGRCKCNGHASRCIKSP---------------QGALVC-ECRHNTAGKDCEKCKPFFSD 299
+ C C+GHA C P QG VC +C+H+T G +CE+C P F
Sbjct: 361 QS--CNCHGHAYDCYYDPEVDRRNASQNLDNVYQGGGVCLDCQHHTTGINCERCVPGFYR 418
Query: 300 RP 301
P
Sbjct: 419 AP 420
Score = 166 (63.5 bits), Expect = 1.4e-17, Sum P(2) = 1.4e-17
Identities = 30/61 (49%), Positives = 37/61 (60%)
Query: 257 GGRCKCNGHASRC-IKSPQGA--LVCECRHNTAGKDCEKCKPFFSDRPWGRATVYDANEC 313
GGRC C+GHA C K P L C C+HNT G C++C P F+ +PW AT ANEC
Sbjct: 301 GGRCVCHGHADVCDAKDPSDPFRLQCACQHNTCGGSCDRCCPGFNQQPWKPATTDSANEC 360
Query: 314 K 314
+
Sbjct: 361 Q 361
Score = 164 (62.8 bits), Expect = 2.7e-17, Sum P(3) = 2.7e-17
Identities = 38/101 (37%), Positives = 48/101 (47%)
Query: 202 CKCNGHASRCIKSPQGELVCECRHNTAGKDCEKCKP-FFSDRPWGRATVYDANECKGGRC 260
C+C+GH+ RC+ G V C+HNT G CE+C+P F S P A+ + C
Sbjct: 1867 CQCHGHSDRCLPG-SGTCV-GCQHNTEGDQCERCRPGFVSSDPSDPASPCVSCPCPLA-V 1923
Query: 261 KCNGHASRCIKSPQGALVCECRHNTAGKDCEKCKPFFSDRP 301
N A CI G C CR AG CE+C P F P
Sbjct: 1924 PSNNFADGCILR-NGRTQCLCRPGYAGASCERCAPGFFGNP 1963
Score = 137 (53.3 bits), Expect = 2.8e-29, Sum P(2) = 2.8e-29
Identities = 44/178 (24%), Positives = 75/178 (42%)
Query: 39 PDFVNAAFGQEVKVNSVCGLESPER---------YCDTSGACHVCDAGSPRGRFPAEYL- 88
P + N A G + ++ CG E+P R YC G G P +Y
Sbjct: 51 PPYFNLAEGARITASATCGEEAPTRSASRPTEDLYCKLVGG--PVAGGDPNQTIQGQYCD 108
Query: 89 ------TDLNNPSNVTCWRSEAQTSVNSLSASPD--NVTLTLSLGKKFELTYISLSFCPK 140
++ +P + +E LS P+ V +TL LG+ F + Y+ + F
Sbjct: 109 ICIAANSNKAHPVSNAIDGTERWWQSPPLSRGPEYNEVNVTLDLGQVFHVAYVLIKFA-N 167
Query: 141 SIKPDSLAIYKSQDFGKSWQPLQFYSSQCKKLYGRTATGVISR-GNEQEALCTDRHKK 197
S +PD + +S DFG ++QP QF++S + R + R + + +CT + +
Sbjct: 168 SPRPDLWVLERSTDFGHTYQPWQFFASSKRDCLERFGPRTLERITQDDDVICTTEYSR 225
Score = 132 (51.5 bits), Expect = 1.4e-13, Sum P(3) = 1.4e-13
Identities = 29/84 (34%), Positives = 43/84 (51%)
Query: 220 VCECRHNTAGKDCEKCKP-FFSDRPWGRATVYDANECKGGRCKCNGHASRCIKSPQGALV 278
+C C N G C++C P ++ D G ++ C C+C+GH+ RC+ P
Sbjct: 1833 LCMCPANYRGDSCQECAPGYYRDTK-G---LF-LGRCVP--CQCHGHSDRCL--PGSGTC 1883
Query: 279 CECRHNTAGKDCEKCKP-FFSDRP 301
C+HNT G CE+C+P F S P
Sbjct: 1884 VGCQHNTEGDQCERCRPGFVSSDP 1907
Score = 122 (48.0 bits), Expect = 1.1e-12, Sum P(2) = 1.1e-12
Identities = 33/119 (27%), Positives = 49/119 (41%)
Query: 198 QGGRCKCNGHASRCIKSPQGELVCECRHNTAGKDCEKCKPFFSDRPWGRATVYDANECKG 257
+ G C G A P+ + C CR + G C++CKP + WG ++ + C
Sbjct: 726 EAGSCHPAGLAPANPALPEAQAPCTCRAHVEGPSCDRCKPGY----WGLSSS-NPEGCT- 779
Query: 258 GRCKCNGHASRC-IKSPQGALVCECRHNTAGKDCEKCKP-FFSDRPWGRATVYDANECK 314
RC C+ + + QG C C+ + GK C CK FF A Y C+
Sbjct: 780 -RCSCDPRGTLGGVTECQGNGQCFCKAHVCGKTCAACKDGFFG---LDHADYYGCRSCR 834
Score = 113 (44.8 bits), Expect = 1.1e-11, Sum P(3) = 1.1e-11
Identities = 38/116 (32%), Positives = 49/116 (42%)
Query: 205 NGHASRCIKSPQGELVCECRHNTAGKDCEKCKPFFSDRPWGRATVYDANECKGGRCKCNG 264
N A CI G C CR AG CE+C P F +G V ++ C+ C C+G
Sbjct: 1926 NNFADGCILR-NGRTQCLCRPGYAGASCERCAPGF----FGNPLVLGSS-CQP--CDCSG 1977
Query: 265 HAS-RCIKSPQGALVCECR---HNTAGKDCEKCKP-FFSDR--PWGRATVYDANEC 313
+ I S L CR +T G CE C P F+ + P G T D + C
Sbjct: 1978 NGDPNMIFSDCDPLTGACRGCLRHTTGPRCESCAPGFYGNALLP-GNCTRCDCSPC 2032
Score = 111 (44.1 bits), Expect = 1.5e-11, Sum P(2) = 1.5e-11
Identities = 34/116 (29%), Positives = 48/116 (41%)
Query: 202 CKCNGHASRCIKSP---------------QGELVC-ECRHNTAGKDCEKCKPFFSDRPWG 245
C C+GHA C P QG VC +C+H+T G +CE+C P F P
Sbjct: 363 CNCHGHAYDCYYDPEVDRRNASQNLDNVYQGGGVCLDCQHHTTGINCERCVPGFYRAP-- 420
Query: 246 RATVYDANECKGGRCKCNGHASRCIKSPQGALVCECRHNTAGKDCEKCKPFFSDRP 301
+ + C+ C+ + C + G C CR N G+ C C + D P
Sbjct: 421 DQPLDSPHVCQPCDCESDFTDGTC-EDLTGR--CYCRPNFTGERCSACAEGYVDFP 473
Score = 105 (42.0 bits), Expect = 6.3e-11, Sum P(2) = 6.3e-11
Identities = 29/94 (30%), Positives = 37/94 (39%)
Query: 201 RCKCNGHASRC-IKSPQGELVCECRHNTAGKDCEKCKP-FFSDRPWGRATVYDANECKGG 258
RC C+ + + QG C C+ + GK C CK FF A Y C
Sbjct: 780 RCSCDPRGTLGGVTECQGNGQCFCKAHVCGKTCAACKDGFFG---LDHADYYGCRSC--- 833
Query: 259 RCKCNGHASRCIKSPQGALVCECRHNTAGKDCEK 292
RC G + + GA C CR NT G C +
Sbjct: 834 RCDVGGALGQGCEPKTGA--CRCRPNTQGPSCSE 865
Score = 104 (41.7 bits), Expect = 8.0e-11, Sum P(2) = 8.0e-11
Identities = 28/102 (27%), Positives = 38/102 (37%)
Query: 202 CKCNGHASRCIKSPQGELVCECRHNTAGKDCEKCKPFFSDRPWGRATVYDANECKGGRCK 261
C +G G+ C CR G C+ C P G Y+ C+ G C
Sbjct: 684 CSADGSMHTTCDPTTGQ--CRCRPRVTGLRCDMCVP-------G---AYNFPYCEAGSCH 731
Query: 262 CNGHASRCIKSPQGALVCECRHNTAGKDCEKCKPFFSDRPWG 303
G A P+ C CR + G C++CKP + WG
Sbjct: 732 PAGLAPANPALPEAQAPCTCRAHVEGPSCDRCKPGY----WG 769
Score = 90 (36.7 bits), Expect = 2.2e-09, Sum P(2) = 2.2e-09
Identities = 24/99 (24%), Positives = 39/99 (39%)
Query: 202 CKCNGHASRCIKSPQGEL----VC--ECRHNTAGKDCEKCKPFFSDRPWGRATVYDANEC 255
C C+G + + P ++ +C CR N AG+ C+ C P F P C
Sbjct: 1532 CNCSGPGVQELTDPTCDMDSGHLCPHRCRPNVAGRRCDTCAPGFYSYP----------SC 1581
Query: 256 KGGRCKCNGHASRCIKSPQGALVCECRHNTAGKDCEKCK 294
+ C C+ + C C+ N G C++C+
Sbjct: 1582 RP--CDCHEAGTMASVCDPFTGQCHCKENVQGSRCDQCR 1618
Score = 89 (36.4 bits), Expect = 2.8e-09, Sum P(2) = 2.8e-09
Identities = 29/94 (30%), Positives = 38/94 (40%)
Query: 202 CKCNGHASRCIKSPQ-GELVCECRHNTAGKDCEKCKPFFSDRPWGRATVYDANECKGGRC 260
C C A +PQ G+ C CR T G C +C P + WG C+ RC
Sbjct: 2074 CACGPAAEGSECNPQTGQ--CHCRPGTTGPQCLECAPGY----WG----LPEKGCR--RC 2121
Query: 261 KC-NGHASRCIKSPQGALVCECRHNTAGKDCEKC 293
+C GH C P C C +G+ C+ C
Sbjct: 2122 QCPRGH---C--DPHTGR-CTCPPGLSGERCDTC 2149
Score = 88 (36.0 bits), Expect = 3.6e-09, Sum P(2) = 3.6e-09
Identities = 30/112 (26%), Positives = 42/112 (37%)
Query: 200 GRCKCNGHASRCIKSPQGELVCE-------CRHNTAGKDCEKCKPFFSDRPWGRATVYDA 252
G G+ +RC SP G C+ C+ G+ C+ C G +
Sbjct: 2016 GNALLPGNCTRCDCSPCGTETCDPQTGRCLCKAGVTGQRCDHCLE-------GH---FGF 2065
Query: 253 NECKGGR-CKCNGHASRCIKSPQGALVCECRHNTAGKDCEKCKPFFSDRPWG 303
+C+G C C A +PQ C CR T G C +C P + WG
Sbjct: 2066 EQCQGCHPCACGPAAEGSECNPQTGQ-CHCRPGTTGPQCLECAPGY----WG 2112
Score = 84 (34.6 bits), Expect = 9.2e-09, Sum P(2) = 9.2e-09
Identities = 27/89 (30%), Positives = 36/89 (40%)
Query: 221 CECRHNTAGKDCEKCKPFFSDRP--WGRATV--YDANE--CKGGR---CKCNGHASR--- 268
C CR N G+ C C + D P + + D E G+ C CN ++
Sbjct: 451 CYCRPNFTGERCSACAEGYVDFPHCYPLPSFPHNDTGEQVLPAGQIVNCDCNAAGTQGNA 510
Query: 269 CIKSPQGALVCECRHNTAGKDCEKCKPFF 297
C K P+ C C+ N G CE C P F
Sbjct: 511 CRKDPRLGR-CVCKPNFQGNHCELCAPGF 538
Score = 80 (33.2 bits), Expect = 2.4e-08, Sum P(3) = 2.4e-08
Identities = 28/106 (26%), Positives = 41/106 (38%)
Query: 202 CKCNGHASRCIKSPQGELVCECRHNTAGKDCEKCKPFFSDRPWGRATVYDANECKGGRCK 261
C C +R G+ +C R T DC C+P + +G + EC
Sbjct: 1488 CDCG---ARLCDELTGQCICPPR--TVPPDCLVCQP----QSFGCHPLVGCEECN----- 1533
Query: 262 CNGHASRCIKSP----QGALVC--ECRHNTAGKDCEKCKPFFSDRP 301
C+G + + P +C CR N AG+ C+ C P F P
Sbjct: 1534 CSGPGVQELTDPTCDMDSGHLCPHRCRPNVAGRRCDTCAPGFYSYP 1579
Score = 77 (32.2 bits), Expect = 4.8e-08, Sum P(2) = 4.8e-08
Identities = 37/124 (29%), Positives = 53/124 (42%)
Query: 202 CKCNGHASR---CIKSPQ-GELVCECRHNTAGKDCEKCKPFF---SDRPWGRATVYDANE 254
C CN ++ C K P+ G C C+ N G CE C P F S P ++ AN
Sbjct: 499 CDCNAAGTQGNACRKDPRLGR--CVCKPNFQGNHCELCAPGFYGPSCHPCQCSSPGVANG 556
Query: 255 -C--KGGRCKCN-G-HASRCIKSPQGAL---VCE-CRHNTAG---KDCEK-----CKPFF 297
C + G+C C G +C G +C+ C + AG + C++ C+P F
Sbjct: 557 LCDPESGQCTCRTGFEGDKCDHCALGYFHFPLCQLCGCSPAGTLPQGCDESGHCQCRPGF 616
Query: 298 SDRP 301
D P
Sbjct: 617 -DGP 619
Score = 75 (31.5 bits), Expect = 7.8e-08, Sum P(2) = 7.8e-08
Identities = 23/81 (28%), Positives = 34/81 (41%)
Query: 221 CECRHNTAGKDCEKCKPFFSDRPWGRATVYDANECKGGRCKCNGHASRCIKSPQ----GA 276
C CR + G+DC +C + WG + C G C+ +CI P+
Sbjct: 1461 CPCRGHVIGRDCSRCATGY----WGFP---NCRPCDCGARLCDELTGQCICPPRTVPPDC 1513
Query: 277 LVCECR----HNTAGKDCEKC 293
LVC+ + H G CE+C
Sbjct: 1514 LVCQPQSFGCHPLVG--CEEC 1532
Score = 65 (27.9 bits), Expect = 7.7e-07, Sum P(3) = 7.7e-07
Identities = 17/50 (34%), Positives = 23/50 (46%)
Query: 221 CECRHNTAGKDCEKCKPFFSDRPWGRATVYDANECKG-GRCKCNGHASRC 269
C C+ N G C++C+ G ++ DA KG RC C G RC
Sbjct: 1603 CHCKENVQGSRCDQCRV-------GTFSL-DAANPKGCTRCFCFGATERC 1644
Score = 47 (21.6 bits), Expect = 5.7e-05, Sum P(2) = 5.7e-05
Identities = 12/33 (36%), Positives = 14/33 (42%)
Query: 257 GGRCKCNGHA-----SRCIKSPQG---ALVCEC 281
GG+C C GH SRC G C+C
Sbjct: 1458 GGQCPCRGHVIGRDCSRCATGYWGFPNCRPCDC 1490
Score = 45 (20.9 bits), Expect = 2.7e-17, Sum P(3) = 2.7e-17
Identities = 9/18 (50%), Positives = 10/18 (55%)
Query: 199 GGRCKCNGHA-----SRC 211
GG+C C GH SRC
Sbjct: 1458 GGQCPCRGHVIGRDCSRC 1475
Score = 38 (18.4 bits), Expect = 2.9e-07, Sum P(3) = 2.9e-07
Identities = 9/24 (37%), Positives = 11/24 (45%)
Query: 56 CGLESPERYCDTSGACHVCDAGSP 79
C L +P Y +CH C SP
Sbjct: 531 CELCAPGFY---GPSCHPCQCSSP 551
Score = 37 (18.1 bits), Expect = 3.6e-07, Sum P(3) = 3.6e-07
Identities = 8/19 (42%), Positives = 8/19 (42%)
Query: 65 CDTSGACHVCDAGSPRGRF 83
C G VCDA P F
Sbjct: 304 CVCHGHADVCDAKDPSDPF 322
>UNIPROTKB|E1BDK6 [details] [associations]
symbol:LAMB2 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0072274 "metanephric glomerular basement membrane
development" evidence=IEA] [GO:0072249 "metanephric glomerular
visceral epithelial cell development" evidence=IEA] [GO:0060041
"retina development in camera-type eye" evidence=IEA] [GO:0048677
"axon extension involved in regeneration" evidence=IEA] [GO:0045202
"synapse" evidence=IEA] [GO:0014044 "Schwann cell development"
evidence=IEA] [GO:0014002 "astrocyte development" evidence=IEA]
[GO:0007601 "visual perception" evidence=IEA] [GO:0007528
"neuromuscular junction development" evidence=IEA] [GO:0007411
"axon guidance" evidence=IEA] [GO:0005608 "laminin-3 complex"
evidence=IEA] [GO:0005178 "integrin binding" evidence=IEA]
GO:GO:0007411 GO:GO:0007528 GO:GO:0007601 GO:GO:0060041
InterPro:IPR002049 Pfam:PF00053 SMART:SM00180 PROSITE:PS01248
PROSITE:PS50027 GO:GO:0014044 GO:GO:0014002 InterPro:IPR008211
Pfam:PF00055 SMART:SM00136 PROSITE:PS51117 GO:GO:0005608
GeneTree:ENSGT00620000087753 InterPro:IPR013015 PROSITE:PS51116
OMA:QPYCIVS GO:GO:0048677 GO:GO:0072274 GO:GO:0072249
EMBL:DAAA02054428 IPI:IPI00904771 UniGene:Bt.7183
Ensembl:ENSBTAT00000057452 NextBio:20873039 ArrayExpress:E1BDK6
Uniprot:E1BDK6
Length = 1802
Score = 237 (88.5 bits), Expect = 4.8e-29, Sum P(2) = 4.8e-29
Identities = 49/119 (41%), Positives = 68/119 (57%)
Query: 200 GRCKCNGHASRCIKSP------QGEL--VCECRHNTAGKDCEKCKPFFSDRPWGRATVYD 251
G C C GHAS+C +P +G + C C+HNT G +CE+C+ F+ D PW A
Sbjct: 285 GNCFCYGHASQCAPAPGAPAHAEGMVHGACVCKHNTRGLNCEQCQDFYHDLPWHPAEDRH 344
Query: 252 ANECKGGRCKCNGHASRC-----IKSPQGAL---VCE-CRHNTAGKDCEKCKPFFSDRP 301
++ CK +C+C+GHA C I G + VC+ C+HNTAG+ CE C+PFF P
Sbjct: 345 SHACK--KCECHGHAHSCHFDMAIYLASGNVSGGVCDGCQHNTAGRQCELCRPFFYRDP 401
Score = 160 (61.4 bits), Expect = 4.9e-17, Sum P(2) = 4.9e-17
Identities = 41/121 (33%), Positives = 56/121 (46%)
Query: 193 DRHKKQGGRCKCNGHASRC-----IKSPQGEL---VCE-CRHNTAGKDCEKCKPFFSDRP 243
DRH +C+C+GHA C I G + VC+ C+HNTAG+ CE C+PFF P
Sbjct: 342 DRHSHACKKCECHGHAHSCHFDMAIYLASGNVSGGVCDGCQHNTAGRQCELCRPFFYRDP 401
Query: 244 WGRATVYDANECKGGRCKCNGH--ASRCIK--SPQGALV---CECRHNTAGKDCEKCKPF 296
+ D C+ C G RC P LV C C+ + G C++C+
Sbjct: 402 --TKDLRDPAVCRSCDCDPMGSQDGGRCDPHDDPALGLVSGQCRCKEHVVGSRCQQCRDG 459
Query: 297 F 297
F
Sbjct: 460 F 460
Score = 138 (53.6 bits), Expect = 1.7e-14, Sum P(2) = 1.7e-14
Identities = 26/65 (40%), Positives = 37/65 (56%)
Query: 258 GRCKCNGHASRCIKSP------QGAL--VCECRHNTAGKDCEKCKPFFSDRPWGRATVYD 309
G C C GHAS+C +P +G + C C+HNT G +CE+C+ F+ D PW A
Sbjct: 285 GNCFCYGHASQCAPAPGAPAHAEGMVHGACVCKHNTRGLNCEQCQDFYHDLPWHPAEDRH 344
Query: 310 ANECK 314
++ CK
Sbjct: 345 SHACK 349
Score = 132 (51.5 bits), Expect = 4.8e-29, Sum P(2) = 4.8e-29
Identities = 36/141 (25%), Positives = 67/141 (47%)
Query: 37 CIPDFVNAAFGQ--EVKVNSVCGLESPERYCDTSGA-----CHVCDAGSPRGRFPAEYLT 89
C P + G+ + +S CGL P+ YC S C +CD+ P F A
Sbjct: 51 CYPATGDLLVGRADRLTASSTCGLRGPQPYCIVSHLQDEKKCFLCDSRRP---FSARDNP 107
Query: 90 DLNNPSNV-TCWRSEAQTSVNSLSASPDNVTLTLSLGKKFELTYISLSFCPKSIKPDSLA 148
+ + NV T + + + + VT+ L L +F T++ ++F K+ +P ++
Sbjct: 108 NSHRIQNVVTSFAPQRRAAWWQSENGVPMVTIQLDLEAEFHFTHLIMTF--KTFRPAAML 165
Query: 149 IYKSQDFGKSWQPLQFYSSQC 169
+ +S DFG++W+ +++S C
Sbjct: 166 VERSADFGRTWRVYRYFSYDC 186
Score = 109 (43.4 bits), Expect = 1.9e-11, Sum P(2) = 1.9e-11
Identities = 30/102 (29%), Positives = 43/102 (42%)
Query: 202 CKCN--GHASRCIKSPQGELVCECRHNTAGKDCEKCKPFFSDRPWGRATVYDANECKGGR 259
C+C+ G S + G+ C CR G C++C+ WG + C+
Sbjct: 835 CQCSPEGALSGLCDATSGQ--CPCRAGAFGLRCDRCQR----GQWGFPS------CRP-- 880
Query: 260 CKCNGHASRCIKSPQGALVCECRHNTAGKDCEKCKPFFSDRP 301
C C+GHA C P CR +T G+ CE+C F P
Sbjct: 881 CVCHGHADEC--DPNTGTCLGCRDHTGGEHCERCIAGFHGDP 920
Score = 98 (39.6 bits), Expect = 2.7e-10, Sum P(2) = 2.7e-10
Identities = 39/129 (30%), Positives = 49/129 (37%)
Query: 199 GGRCK-C---NGHASR------CIKSPQGE-LVCECRHNTAGKDCEKCKP-FFSD--RPW 244
GG+C+ C G SR C + + +VC CR G CE C P F D RP
Sbjct: 925 GGQCRPCPCPEGPGSRRHFATSCHRDGYSQQVVCHCRAGYTGLRCEACAPGHFGDPSRPG 984
Query: 245 GRATVYDANECKGGRCKCNGHASRCIKSPQGALVCECRHNTAGKDCEKCKPFFSDRPWGR 304
G EC G + A C P C ++T G C CKP F G+
Sbjct: 985 GGC---QPCECSGNIDPTDPDA--C--DPHSGQCLHCLYHTEGPRCAHCKPGFH----GQ 1033
Query: 305 ATVYDANEC 313
A + C
Sbjct: 1034 AARQSCHRC 1042
Score = 96 (38.9 bits), Expect = 4.3e-10, Sum P(2) = 4.3e-10
Identities = 28/114 (24%), Positives = 47/114 (41%)
Query: 201 RCKCNGHASRCIKSP--QGELVCECRHNTAGKDCEKCKPFFSDRPWGRATVYDANECKGG 258
RC+C+ + +P + C C+ G+ C +C P WG + +D C+
Sbjct: 473 RCQCDPRGTVPGGTPCDRNSGACFCKRLVTGQGCNRCLPGH----WGLS--HDLLGCRPC 526
Query: 259 RCKCNGHASRCIKSPQGALVCECRHNTAGKDCEKCKPFFSDRPWGRATVYDANE 312
C G G C CR + G+ CE+ +P + RP+ ++A E
Sbjct: 527 DCDIGGALDPQCNEATGQ--CRCRQHMVGRRCEQVQPGYF-RPFLDHLTWEAEE 577
Score = 94 (38.1 bits), Expect = 6.9e-10, Sum P(2) = 6.9e-10
Identities = 27/108 (25%), Positives = 47/108 (43%)
Query: 191 CTDRHKKQGGRCKCNGHASRCIKSPQGELVCECRHNTAGKDCEKCKPFFSDRPWGRATVY 250
C + GGRC + H + G+ C C+ + G C++C+ F +G +
Sbjct: 416 CDPMGSQDGGRC--DPHDDPALGLVSGQ--CRCKEHVVGSRCQQCRDGF----FGLS--- 464
Query: 251 DANECKG-GRCKCNGHASRCIKSP--QGALVCECRHNTAGKDCEKCKP 295
AN G RC+C+ + +P + + C C+ G+ C +C P
Sbjct: 465 -ANNPLGCQRCQCDPRGTVPGGTPCDRNSGACFCKRLVTGQGCNRCLP 511
Score = 93 (37.8 bits), Expect = 8.7e-10, Sum P(2) = 8.7e-10
Identities = 36/126 (28%), Positives = 47/126 (37%)
Query: 193 DRHKKQGG--RCKCNGHASRCIKS---PQGELVCECRHNTAGKDCEKCKPFFSDRPWGRA 247
D + GG C+C+G+ P C ++T G C CKP F G+A
Sbjct: 979 DPSRPGGGCQPCECSGNIDPTDPDACDPHSGQCLHCLYHTEGPRCAHCKPGFH----GQA 1034
Query: 248 TVYDANECKGGRCKCN--GHASR-------CIKSPQGALVCECRHNTAGKDCEKCKPFFS 298
C RC CN G +R C P C C N G C++C P F
Sbjct: 1035 A---RQSCH--RCTCNLLGTDARQCPSTDHCNCDPSSGQ-CPCLPNVQGLSCDRCAPNFW 1088
Query: 299 DRPWGR 304
+ GR
Sbjct: 1089 NLTSGR 1094
Score = 87 (35.7 bits), Expect = 3.6e-09, Sum P(2) = 3.6e-09
Identities = 24/95 (25%), Positives = 39/95 (41%)
Query: 202 CKCNGHASRCIK-SPQGELVCECRHNTAGKDCEKCKP-FFSDRPWGRATVYDANECKGGR 259
C+C+ S + +P G C C+ G+ C+ C P ++ P G C+ +
Sbjct: 787 CQCDPQGSLSSECNPHGGQ-CRCKPAVVGRRCDLCAPGYYGFGPTG---------CQACQ 836
Query: 260 CKCNGHASRCIKSPQGALVCECRHNTAGKDCEKCK 294
C G S + G C CR G C++C+
Sbjct: 837 CSPEGALSGLCDATSGQ--CPCRAGAFGLRCDRCQ 869
Score = 87 (35.7 bits), Expect = 3.6e-09, Sum P(2) = 3.6e-09
Identities = 30/104 (28%), Positives = 42/104 (40%)
Query: 200 GR-CK-CNGHASRCIKSPQGELV--CECRHNTAGKDCEKCKPFFSDRPWGRATVYDANEC 255
GR C+ C H SR E C CR G+ C +C+ WG + +C
Sbjct: 1093 GRGCQPCACHPSRARGPACNEFTGQCHCRAGFGGRTCSECQELH----WGDPGL----QC 1144
Query: 256 KGGRCKCNG-HASRCIKSPQGALVCECRHNTAGKDCEKCKPFFS 298
+ C G +C +S G C CR +G C++C FS
Sbjct: 1145 RACDCDPRGIDTPQCHRST-GH--CSCRPGVSGVRCDQCARGFS 1185
Score = 61 (26.5 bits), Expect = 1.7e-06, Sum P(2) = 1.7e-06
Identities = 13/46 (28%), Positives = 22/46 (47%)
Query: 260 CKCNGHASRCIK-SPQGALVCECRHNTAGKDCEKCKP-FFSDRPWG 303
C+C+ S + +P G C C+ G+ C+ C P ++ P G
Sbjct: 787 CQCDPQGSLSSECNPHGGQ-CRCKPAVVGRRCDLCAPGYYGFGPTG 831
>UNIPROTKB|E1C700 [details] [associations]
symbol:LAMB2 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0005178 "integrin binding" evidence=IEA] [GO:0005608
"laminin-3 complex" evidence=IEA] [GO:0007411 "axon guidance"
evidence=IEA] [GO:0007528 "neuromuscular junction development"
evidence=IEA] [GO:0007601 "visual perception" evidence=IEA]
[GO:0014002 "astrocyte development" evidence=IEA] [GO:0014044
"Schwann cell development" evidence=IEA] [GO:0045202 "synapse"
evidence=IEA] [GO:0048677 "axon extension involved in regeneration"
evidence=IEA] [GO:0060041 "retina development in camera-type eye"
evidence=IEA] [GO:0072249 "metanephric glomerular visceral
epithelial cell development" evidence=IEA] [GO:0072274 "metanephric
glomerular basement membrane development" evidence=IEA]
GO:GO:0050808 InterPro:IPR013032 PROSITE:PS00022 InterPro:IPR002049
Pfam:PF00053 SMART:SM00180 PROSITE:PS01248 PROSITE:PS50027
InterPro:IPR008211 Pfam:PF00055 SMART:SM00136 PROSITE:PS51117
GO:GO:0005608 GeneTree:ENSGT00620000087753 InterPro:IPR013015
PROSITE:PS51116 OMA:QPYCIVS EMBL:AADN02014165 EMBL:AADN02014166
EMBL:AADN02014167 EMBL:AADN02014168 EMBL:AADN02014169
EMBL:AADN02014170 IPI:IPI00820014 ProteinModelPortal:E1C700
Ensembl:ENSGALT00000036239 ArrayExpress:E1C700 Uniprot:E1C700
Length = 1773
Score = 214 (80.4 bits), Expect = 5.7e-29, Sum P(2) = 5.7e-29
Identities = 44/120 (36%), Positives = 63/120 (52%)
Query: 200 GRCKCNGHASRCIKSPQGE-----LV---CECRHNTAGKDCEKCKPFFSDRPWGRATVYD 251
G C C+GHA+ C +P ++ C C+H+T G +CE+C+ F+ + PW A
Sbjct: 263 GSCFCHGHAAECAPAPGAPPSVPGMIHGRCVCKHHTQGLNCERCEDFYHELPWRPAEGSS 322
Query: 252 ANECKGGRCKCNGHASRC---------IKSPQGALVCE-CRHNTAGKDCEKCKPFFSDRP 301
N C+ RC CN H+ RC + GA VC+ C+HNT G+ C CKPF+ P
Sbjct: 323 TNACR--RCDCNEHSRRCHFDMAVFLATGNTSGA-VCDGCQHNTMGRRCHLCKPFYYRHP 379
Score = 180 (68.4 bits), Expect = 5.7e-29, Sum P(2) = 5.7e-29
Identities = 49/171 (28%), Positives = 85/171 (49%)
Query: 37 CIPDFVNAAFGQ--EVKVNSVCGLESPERYC-----DTSGACHVCDAGSP--RGRFPAEY 87
C P N G+ ++ +S CGL+ P+ YC S C CD+ +P R E
Sbjct: 33 CYPATGNLLVGRARQLSASSTCGLQGPQEYCIVSHLQDSEKCFTCDSRNPALRESHRIEN 92
Query: 88 LTDLNNP-SNVTCWRSEAQTSVNSLSASPDNVTLTLSLGKKFELTYISLSFCPKSIKPDS 146
+ L+ P S + W+SE N + + V++ L L +F T++ + F K+ +P +
Sbjct: 93 VIYLHGPHSERSWWQSE-----NGV----ERVSIQLDLEGEFHFTHLIMKF--KTFRPAA 141
Query: 147 LAIYKSQDFGKSWQPLQFYSSQCKKLYGRTATGVISRGNEQEALCTDRHKK 197
+ + +S DFG+SW+ ++++ C KL+ AT G+ E LC R+ +
Sbjct: 142 MLVERSADFGRSWKVYRYFAYNCSKLFPGIATH--PSGHIGEVLCEQRYSE 190
Score = 135 (52.6 bits), Expect = 2.3e-05, P = 2.3e-05
Identities = 40/136 (29%), Positives = 57/136 (41%)
Query: 161 PLQFYSSQCKKLYG--RTATGVISRGNEQEALCTDRHKKQGGR-CKCNGHASRCIKSPQG 217
P S++C+ G R V+ R + + T G R C+C+G S
Sbjct: 764 PQGLLSAECQPQGGQCRCKPNVVGRRCHRCSPGTFGFGPGGCRPCQCSGEGSLSAVCDTI 823
Query: 218 ELVCECRHNTAGKDCEKCKPFFSDRPWGRATVYDANECKGGRCKCNGHASRCIKSPQGAL 277
C CR G C++C+P WG T C+ C+CNGHA C PQ
Sbjct: 824 TGQCPCRQGAHGSRCDRCQPGH----WGFPT------CRP--CQCNGHAEEC--DPQTGS 869
Query: 278 VCECRHNTAGKDCEKC 293
CR +T G+ C++C
Sbjct: 870 CLRCRDHTDGERCQRC 885
Score = 133 (51.9 bits), Expect = 1.6e-19, Sum P(2) = 1.6e-19
Identities = 34/112 (30%), Positives = 48/112 (42%)
Query: 201 RCKCNGHASRC-----IKSPQGEL---VCE-CRHNTAGKDCEKCKPFFSDRPWGRATVYD 251
RC CN H+ RC + G VC+ C+HNT G+ C CKPF+ P R+ +
Sbjct: 328 RCDCNEHSRRCHFDMAVFLATGNTSGAVCDGCQHNTMGRRCHLCKPFYYRHP--RSDIRA 385
Query: 252 ANECKGGRCK---------CNGHASRCIKSPQGALVCECRHNTAGKDCEKCK 294
C C C+ H + G C C+ N AG C++C+
Sbjct: 386 PTACVPCDCDPAGSLDGGACDAHTDVALGMIAGQ--CRCKENVAGPRCDRCQ 435
Score = 126 (49.4 bits), Expect = 8.4e-19, Sum P(2) = 8.4e-19
Identities = 24/66 (36%), Positives = 37/66 (56%)
Query: 258 GRCKCNGHASRCIKSPQGA------LV---CECRHNTAGKDCEKCKPFFSDRPWGRATVY 308
G C C+GHA+ C +P GA ++ C C+H+T G +CE+C+ F+ + PW A
Sbjct: 263 GSCFCHGHAAECAPAP-GAPPSVPGMIHGRCVCKHHTQGLNCERCEDFYHELPWRPAEGS 321
Query: 309 DANECK 314
N C+
Sbjct: 322 STNACR 327
Score = 125 (49.1 bits), Expect = 1.1e-18, Sum P(2) = 1.1e-18
Identities = 31/107 (28%), Positives = 46/107 (42%)
Query: 202 CKCNGHASRCIKSPQGELVCECRHNTAGKDCEKCKP-FFSDRPWGRATVYDANECKGGRC 260
C+CNGHA C PQ CR +T G+ C++C F + G C G
Sbjct: 854 CQCNGHAEEC--DPQTGSCLRCRDHTDGERCQRCAAGHFGNPALGSGQHCRPCPCPDGPG 911
Query: 261 KCNGHASRCIKSPQGA-LVCECRHNTAGKDCEKCKP-FFSD--RPWG 303
A+ C + + +VC C G C++C P ++ D +P G
Sbjct: 912 GPRHFAASCYQDGRSRQVVCHCSPGYTGPRCDECAPGYYGDPLQPGG 958
Score = 104 (41.7 bits), Expect = 1.6e-16, Sum P(2) = 1.6e-16
Identities = 31/93 (33%), Positives = 40/93 (43%)
Query: 205 NGHASRCIKSPQGELVCECRHNTAGKDCEKCKPFFSDRPWGRATVYDANECKGG-R-CKC 262
NG A C+ PQG L EC+ G C +CKP R R + GG R C+C
Sbjct: 755 NG-ALPCLCDPQGLLSAECQPQ--GGQC-RCKPNVVGRRCHRCSPGTFGFGPGGCRPCQC 810
Query: 263 NGHASRCIKSPQGALVCECRHNTAGKDCEKCKP 295
+G S C CR G C++C+P
Sbjct: 811 SGEGSLSAVCDTITGQCPCRQGAHGSRCDRCQP 843
Score = 100 (40.3 bits), Expect = 4.3e-16, Sum P(2) = 4.3e-16
Identities = 30/104 (28%), Positives = 45/104 (43%)
Query: 201 RCKCN-----GHASRCIKSP-QGELVCECRHNTAGKDCEKCKPFFSDRPWGRATVYDANE 254
RC C+ S+C P G+ C C+ G+ C++C P W A +D
Sbjct: 451 RCLCDPRGTVADGSQC--DPISGD--CLCKRLVTGRSCDQCLP----EHW--ALSHDLPG 500
Query: 255 CKGGRCKCNG-HASRCIKSPQGALVCECRHNTAGKDCEKCKPFF 297
C+ C G H ++C G C CR + G+ CE+ +P F
Sbjct: 501 CQPCECDVGGAHDNQCAMET-GQ--CRCRSHIVGRQCEQVEPGF 541
Score = 99 (39.9 bits), Expect = 5.4e-16, Sum P(2) = 5.4e-16
Identities = 32/113 (28%), Positives = 51/113 (45%)
Query: 199 GGRCK-CNGHASRCIKSPQ------GELVCECRHNTAGKDCEKCKPFFSDRPWGRATVYD 251
GG C+ C H + P+ G+ + C +NTAG C +C+P + +G A
Sbjct: 957 GGHCRPCQCHNNIDTTDPEACDRRTGQCL-RCLYNTAGPHCAECQPGY----YGDAM--- 1008
Query: 252 ANECKGGRCKCN--G-HASRC----IKSPQGALVCECRHNTAGKDCEKCKPFF 297
+ C+ RC CN G + C + Q + C C + G+ C++C P F
Sbjct: 1009 RHSCR--RCSCNTLGTDPNTCGPQQCQCDQRSGQCHCLPHVEGQSCDRCSPNF 1059
Score = 93 (37.8 bits), Expect = 2.3e-15, Sum P(2) = 2.3e-15
Identities = 24/97 (24%), Positives = 39/97 (40%)
Query: 202 CKCNGHASRCIKSPQGELVCECRHNTAGKDCEKCKPFFSDRPWGRATVYDANECKGGRCK 261
C C+ S Q C CR G+ C C+ ++ WG + +C+ C
Sbjct: 1071 CACHPQHSLSPACNQFTGQCSCRPGFGGRTCANCQ----EQHWGDPRL----QCRA--CD 1120
Query: 262 CNGHASRCIKSPQGALVCECRHNTAGKDCEKCKPFFS 298
C+ + G+ C+CR +G C++C FS
Sbjct: 1121 CDPRGIASTQCHHGSGHCDCRPGISGVRCDQCARGFS 1157
Score = 90 (36.7 bits), Expect = 4.7e-15, Sum P(2) = 4.7e-15
Identities = 23/95 (24%), Positives = 41/95 (43%)
Query: 208 ASRCIKSPQG-ELVCECRHNTAGKDCEKCKPFFSDRPWGRATVYDANECKGGRCKCNGHA 266
A+ C + + ++VC C G C++C P + P + C+ +C N
Sbjct: 917 AASCYQDGRSRQVVCHCSPGYTGPRCDECAPGYYGDP-----LQPGGHCRPCQCHNNIDT 971
Query: 267 SRCIKSPQGALVC-ECRHNTAGKDCEKCKP-FFSD 299
+ + C C +NTAG C +C+P ++ D
Sbjct: 972 TDPEACDRRTGQCLRCLYNTAGPHCAECQPGYYGD 1006
Score = 76 (31.8 bits), Expect = 1.3e-13, Sum P(2) = 1.3e-13
Identities = 36/133 (27%), Positives = 51/133 (38%)
Query: 181 ISRGNEQEALCTD-RHKKQGGRCK-CNG----HASRCIKSPQGELVCECRHNTAGK-DCE 233
++ GN A+C +H G RC C H I++P + C+C + AG D
Sbjct: 346 LATGNTSGAVCDGCQHNTMGRRCHLCKPFYYRHPRSDIRAPTACVPCDC--DPAGSLDGG 403
Query: 234 KCKPFFSDRPWGRATVYDANECK----GGRC-KCNGHASRCIKS--PQGALVCECRHNTA 286
C +D G + CK G RC +C H + + PQG C C
Sbjct: 404 ACDAH-TDVALGM--IAGQCRCKENVAGPRCDRCQ-HGAYGLSQGDPQGCQRCLCDPRGT 459
Query: 287 GKDCEKCKPFFSD 299
D +C P D
Sbjct: 460 VADGSQCDPISGD 472
Score = 66 (28.3 bits), Expect = 1.4e-12, Sum P(2) = 1.4e-12
Identities = 25/98 (25%), Positives = 37/98 (37%)
Query: 206 GHASRCIKSPQGELVCECRHNTAGK----DCEKCKPFFSDRPWGRATVYDANECKGGRCK 261
G RC+ + G EC+ G C +C S G D N C +C+
Sbjct: 982 GQCLRCLYNTAGPHCAECQPGYYGDAMRHSCRRC----SCNTLGT----DPNTCGPQQCQ 1033
Query: 262 CNGHASRCIKSP--QGALVCECRHNT----AGKDCEKC 293
C+ + +C P +G C N +G+ CE C
Sbjct: 1034 CDQRSGQCHCLPHVEGQSCDRCSPNFWNLGSGQGCEPC 1071
Score = 59 (25.8 bits), Expect = 7.7e-12, Sum P(2) = 7.7e-12
Identities = 22/89 (24%), Positives = 34/89 (38%)
Query: 221 CECRHNTAGKDCEKCKPFFSDRPWGRATVYDANECKGGRCK-CNGHASRCIKSPQ-GALV 278
C C + G+ C++C P F + G+ A + CN +C P G
Sbjct: 1041 CHCLPHVEGQSCDRCSPNFWNLGSGQGCEPCACHPQHSLSPACNQFTGQCSCRPGFGGRT 1100
Query: 279 C-ECRHNTAGKDCEKCKPFFSDRPWGRAT 306
C C+ G +C+ D P G A+
Sbjct: 1101 CANCQEQHWGDPRLQCRACDCD-PRGIAS 1128
Score = 46 (21.3 bits), Expect = 1.7e-10, Sum P(2) = 1.7e-10
Identities = 13/44 (29%), Positives = 17/44 (38%)
Query: 205 NGHASRCIKSPQGELVCECRHNTAGK--DCEKCKPFFSDRPWGR 246
+GH C G +C +G C+ C P F D W R
Sbjct: 1135 SGHCD-CRPGISGVRCDQCARGFSGTFPACQPCHPCFGD--WDR 1175
>UNIPROTKB|A4D0S4 [details] [associations]
symbol:LAMB4 "Laminin subunit beta-4" species:9606 "Homo
sapiens" [GO:0007155 "cell adhesion" evidence=IEA] [GO:0005604
"basement membrane" evidence=IEA] GO:GO:0007155 InterPro:IPR013032
PROSITE:PS00022 PROSITE:PS01186 InterPro:IPR002049 Pfam:PF00053
SMART:SM00180 PROSITE:PS01248 PROSITE:PS50027 GO:GO:0005604
EMBL:CH236947 InterPro:IPR008211 Pfam:PF00055 SMART:SM00136
PROSITE:PS51117 InterPro:IPR013015 PROSITE:PS51116
HOVERGEN:HBG052301 CTD:22798 eggNOG:NOG303831 KO:K06245
EMBL:AF028816 EMBL:AC005048 EMBL:BC045172 EMBL:BC140804
EMBL:BC142619 EMBL:AK075165 IPI:IPI00295437 IPI:IPI00852842
IPI:IPI00927194 RefSeq:NP_031382.2 UniGene:Hs.62022
ProteinModelPortal:A4D0S4 SMR:A4D0S4 IntAct:A4D0S4 STRING:A4D0S4
PhosphoSite:A4D0S4 PaxDb:A4D0S4 PRIDE:A4D0S4
Ensembl:ENST00000205386 Ensembl:ENST00000388780
Ensembl:ENST00000388781 Ensembl:ENST00000422975 GeneID:22798
KEGG:hsa:22798 UCSC:uc003vey.2 GeneCards:GC07M107663 HGNC:HGNC:6491
HPA:HPA020242 HPA:HPA024247 neXtProt:NX_A4D0S4 PharmGKB:PA30279
OMA:CHPQGSK OrthoDB:EOG46DM1W ChiTaRS:LAMB4 GenomeRNAi:22798
NextBio:43142 ArrayExpress:A4D0S4 Bgee:A4D0S4 CleanEx:HS_LAMB4
Genevestigator:A4D0S4 Uniprot:A4D0S4
Length = 1761
Score = 246 (91.7 bits), Expect = 9.2e-29, Sum P(2) = 9.2e-29
Identities = 55/134 (41%), Positives = 68/134 (50%)
Query: 200 GRCKCNGHASRC---------IKSPQGEL--VCECRHNTAGKDCEKCKPFFSDRPWGRAT 248
G C CNGHAS C + SP G + C C+HNT G +CE+CK FF D PW A
Sbjct: 263 GSCFCNGHASECRPMQKMRGDVFSPPGMVHGQCVCQHNTDGPNCERCKDFFQDAPWRPAA 322
Query: 249 VYDANECKGGRCKCNGHASRC-----IKSPQGAL---VCE-CRHNTAGKDCEKCKPFFSD 299
N C+ C CN H+SRC G L VCE C+HNT G+ C++C+P F
Sbjct: 323 DLQDNACRS--CSCNSHSSRCHFDMTTYLASGGLSGGVCEDCQHNTEGQHCDRCRPLFYR 380
Query: 300 RPWGRATVYDANEC 313
P T+ D C
Sbjct: 381 DPL--KTISDPYAC 392
Score = 155 (59.6 bits), Expect = 3.1e-15, Sum P(2) = 3.1e-15
Identities = 39/110 (35%), Positives = 51/110 (46%)
Query: 202 CKCNGHASRC-----IKSPQGEL---VCE-CRHNTAGKDCEKCKPFFSDRPWGRATVYDA 252
C CN H+SRC G L VCE C+HNT G+ C++C+P F P T+ D
Sbjct: 332 CSCNSHSSRCHFDMTTYLASGGLSGGVCEDCQHNTEGQHCDRCRPLFYRDPL--KTISDP 389
Query: 253 NECKGGRCKCNGHASR--CIKSPQGAL-----VCECRHNTAGKDCEKCKP 295
C C +G S C+ AL C C+ N G C++CKP
Sbjct: 390 YACIPCECDPDGTISGGICVSHSDPALGSVAGQCLCKENVEGAKCDQCKP 439
Score = 149 (57.5 bits), Expect = 1.6e-14, Sum P(2) = 1.6e-14
Identities = 30/68 (44%), Positives = 36/68 (52%)
Query: 258 GRCKCNGHASRC---------IKSPQGAL--VCECRHNTAGKDCEKCKPFFSDRPWGRAT 306
G C CNGHAS C + SP G + C C+HNT G +CE+CK FF D PW A
Sbjct: 263 GSCFCNGHASECRPMQKMRGDVFSPPGMVHGQCVCQHNTDGPNCERCKDFFQDAPWRPAA 322
Query: 307 VYDANECK 314
N C+
Sbjct: 323 DLQDNACR 330
Score = 120 (47.3 bits), Expect = 9.2e-29, Sum P(2) = 9.2e-29
Identities = 31/150 (20%), Positives = 68/150 (45%)
Query: 37 CIPDFVNAAFGQEVKV--NSVCGLESPERYCDTS---GA--CHVCDAGSPRGRFPAEYLT 89
C P + G+ ++ +S CGL ++YC S G C +CD+ P +
Sbjct: 28 CHPTTGDLLVGRNTQLMASSTCGLSRAQKYCILSYLEGEQKCFICDSRFPYDPYDQPNSH 87
Query: 90 DLNNPSNVTCWRSEAQTSVNSLSASPDNVTLTLSLGKKFELTYISLSFCPKSIKPDSLAI 149
+ N + + + + D+V++ L L F +++ L+F K+ +P ++ +
Sbjct: 88 TIENV--IVSFEPDREKKWWQSENGLDHVSIRLDLEALFRFSHLILTF--KTFRPAAMLV 143
Query: 150 YKSQDFGKSWQPLQFYSSQCKKLYGRTATG 179
+S D+G +W+ ++++ C + +G
Sbjct: 144 ERSTDYGHNWKVFKYFAKDCATSFPNITSG 173
Score = 96 (38.9 bits), Expect = 8.9e-09, Sum P(2) = 8.9e-09
Identities = 28/110 (25%), Positives = 42/110 (38%)
Query: 203 KCNGHASRCIKSPQGELVCECRHNTAGKDCEKCKPFFSDRPWGRATVYDANECKGGRCKC 262
+C C+ P C C N G C++C +D W + C+ C C
Sbjct: 1033 ECPPGGGACLCDPVTG-ACPCLPNVTGLACDRC----ADGYWN---LVPGRGCQS--CDC 1082
Query: 263 NGHASRCIKSPQGALVCECRHNTAGKDCEKCKP-FFSDRPWGRATVYDAN 311
+ S+ Q C C+ GK C +C+ ++ D P GR D N
Sbjct: 1083 DPRTSQSSHCDQLTGQCPCKLGYGGKRCSECQENYYGDPP-GRCIPCDCN 1131
Score = 93 (37.8 bits), Expect = 1.8e-08, Sum P(2) = 1.8e-08
Identities = 25/93 (26%), Positives = 39/93 (41%)
Query: 202 CKCNGHASRCIKSPQGELVCECRHNTAGKDCEKCKP-FFSDRPWGRATVYDANECKGGRC 260
C C+ S+ Q C C+ GK C +C+ ++ D P GR D N + G
Sbjct: 1080 CDCDPRTSQSSHCDQLTGQCPCKLGYGGKRCSECQENYYGDPP-GRCIPCDCN--RAG-- 1134
Query: 261 KCNGHASRCIKSPQGALVCECRHNTAGKDCEKC 293
+ I P + C CR +G+ C++C
Sbjct: 1135 -----TQKPICDPDTGM-CRCREGVSGQRCDRC 1161
Score = 91 (37.1 bits), Expect = 2.9e-08, Sum P(2) = 2.9e-08
Identities = 23/83 (27%), Positives = 35/83 (42%)
Query: 218 ELVCECRHNTAGKDCEKCKPFFSDRPWGRATVYDANECKGGRCKCNGHASRCIKSPQGAL 277
+++C C G C +C F +G + A C+ C CN + + P+
Sbjct: 935 DVICNCLQGYTGTQCGECSTGF----YGNPRISGA-PCQP--CACNNNID--VTDPESCS 985
Query: 278 ----VC-ECRHNTAGKDCEKCKP 295
C C HNT G +C+ CKP
Sbjct: 986 RVTGECLRCLHNTQGANCQLCKP 1008
Score = 88 (36.0 bits), Expect = 5.9e-08, Sum P(2) = 5.9e-08
Identities = 25/93 (26%), Positives = 36/93 (38%)
Query: 203 KCNGHASRCIKSPQGELVCECRHNTAGKDCEKCKPFFSDRPWGRATV--YDANECKGGRC 260
K + A C PQG + C + G C+ CKP R R + YD C
Sbjct: 761 KLHDGAVACKCHPQGSVGSSC--SRLGGQCQ-CKPLVVGRCCDRCSTGSYDLGHHGCHPC 817
Query: 261 KCNGHASRCIKSPQGALVCECRHNTAGKDCEKC 293
C+ S+ Q C C +G+ C++C
Sbjct: 818 HCHPQGSKDTVCDQVTGQCPCHGEVSGRRCDRC 850
Score = 82 (33.9 bits), Expect = 2.4e-07, Sum P(2) = 2.4e-07
Identities = 26/93 (27%), Positives = 38/93 (40%)
Query: 221 CECRHNTAGKDCEKCKPFFSDRPWGRATVYDANECKGGRCKCN-GHASRCIKSPQGALVC 279
C C G CE+C + WG + C C C+ G A + SP+ C
Sbjct: 475 CLCLSYVTGAHCEECTVGY----WGLGN--HLHGCSP--CDCDIGGAYSNVCSPKNGQ-C 525
Query: 280 ECRHNTAGKDCEKCKPFFSDRPWGRATVYDANE 312
ECR + G+ C + P + P +Y+A E
Sbjct: 526 ECRPHVTGRSCSEPAPGYFFAPLN-FYLYEAEE 557
Score = 80 (33.2 bits), Expect = 3.9e-07, Sum P(2) = 3.9e-07
Identities = 26/106 (24%), Positives = 40/106 (37%)
Query: 202 CKCNGHASRCIKSPQGELVCECRHNTAGKDCEKCKPFFSDRPWGRATVYDANECKGGRC- 260
C CN A C P+ C T G++CE+C D +G + C+ C
Sbjct: 863 CPCNRFAELC--DPETGSCFNCGGFTTGRNCERC----IDGYYGNPS--SGQPCRPCLCP 914
Query: 261 ---KCNGH-ASRCIKSPQGA-LVCECRHNTAGKDCEKCKPFFSDRP 301
N + A C ++ + ++C C G C +C F P
Sbjct: 915 DDPSSNQYFAHSCYQNLWSSDVICNCLQGYTGTQCGECSTGFYGNP 960
>ZFIN|ZDB-GENE-050310-1 [details] [associations]
symbol:ntn4 "netrin 4" species:7955 "Danio rerio"
[GO:0048514 "blood vessel morphogenesis" evidence=IMP] [GO:0005576
"extracellular region" evidence=IEA] InterPro:IPR001134
PROSITE:PS50189 ZFIN:ZDB-GENE-050310-1 GO:GO:0005576
InterPro:IPR002049 InterPro:IPR008993 Pfam:PF00053 SMART:SM00180
SUPFAM:SSF50242 PROSITE:PS01248 PROSITE:PS50027 InterPro:IPR018933
Pfam:PF01759 InterPro:IPR008211 Pfam:PF00055 SMART:SM00136
PROSITE:PS51117 HOVERGEN:HBG082019 EMBL:BC163582 IPI:IPI00864479
UniGene:Dr.84045 ProteinModelPortal:B3DJR9 HOGENOM:HOG000168430
Uniprot:B3DJR9
Length = 593
Score = 220 (82.5 bits), Expect = 9.7e-29, Sum P(2) = 9.7e-29
Identities = 51/133 (38%), Positives = 70/133 (52%)
Query: 200 GRCKCNGHASRCIKSPQ-------GELV----CECRHNTAGKDCEKCKPFFSDRPWGRAT 248
G C C+GHA +C+ + G+ V C CRH+TAG CE+C ++DRPW A
Sbjct: 246 GGCLCHGHADQCVPTGGKHNSKTFGKHVVHGKCSCRHHTAGDHCERCHRLYNDRPWRAAD 305
Query: 249 --VYDANECKGGRCKCNGHASRC-------IKSPQ--GALVCECRHNTAGKDCEKCKPFF 297
+AN+C CKCNGHA C ++S Q G VC+C HNT G+ C+ C+ F
Sbjct: 306 GLTGEANQCV--ECKCNGHAESCHFDESIWLRSGQQHGG-VCDCLHNTTGQHCQHCQSGF 362
Query: 298 SDRPWGRATVYDA 310
P +T D+
Sbjct: 363 YRDPEKPSTAPDS 375
Score = 156 (60.0 bits), Expect = 3.5e-20, Sum P(2) = 3.5e-20
Identities = 45/141 (31%), Positives = 62/141 (43%)
Query: 165 YSSQCKKLYG----RTATGVISRGNEQEALCTDRHKKQGGRCKCNGHASRC-------IK 213
+ +C +LY R A G+ N+ C + CKCNGHA C ++
Sbjct: 288 HCERCHRLYNDRPWRAADGLTGEANQ----CVE--------CKCNGHAESCHFDESIWLR 335
Query: 214 SPQGEL-VCECRHNTAGKDCEKCKPFFSDRPWGRATVYDANECKGGRCKCNGHASRCIKS 272
S Q VC+C HNT G+ C+ C+ F P +T D+ C C CN S K
Sbjct: 336 SGQQHGGVCDCLHNTTGQHCQHCQSGFYRDPEKPSTAPDS--CTP--CMCNHVGSSYCKP 391
Query: 273 PQGALVCECRHNTAGKDCEKC 293
G C C+ AG+ CE+C
Sbjct: 392 DNGE--CVCKPGVAGRHCEQC 410
Score = 155 (59.6 bits), Expect = 9.7e-29, Sum P(2) = 9.7e-29
Identities = 45/144 (31%), Positives = 71/144 (49%)
Query: 35 RRCIPDFVNAAFGQEVKVNSVCGLESPERYC----DTSGA-CHVCDA-GSPRGRFPAEYL 88
R C P N A G+ ++ S CG SPE++C D+ C +CDA S P+ +
Sbjct: 31 RVCNPRMGNLAVGRPIQTISQCGSTSPEQFCMYRPDSCVLDCEICDALVSQHAHSPSS-M 89
Query: 89 TDLNNPSNVTCWRSEAQTSVNSLSASPDNVTLTLSLGKKFELTYISLSFCPKSIKPDSLA 148
TD +T W+S T++ TL L L +F T++ + F S +P +A
Sbjct: 90 TDSPFKQPLTWWQSAPGTAIE---------TLQLDLEVEFYFTHLIIIFM--SPRPAVMA 138
Query: 149 IYKSQDFGKSWQPLQFYSSQCKKL 172
I +S+DFG++W L +S C ++
Sbjct: 139 IDRSRDFGQTWSLLMLFSHNCSEV 162
>FB|FBgn0261800 [details] [associations]
symbol:LanB1 "LanB1" species:7227 "Drosophila melanogaster"
[GO:0031012 "extracellular matrix" evidence=IDA] [GO:0005604
"basement membrane" evidence=ISS;NAS;IDA] [GO:0005605 "basal
lamina" evidence=IDA] [GO:0009888 "tissue development"
evidence=NAS] [GO:0009887 "organ morphogenesis" evidence=NAS]
[GO:0048598 "embryonic morphogenesis" evidence=NAS] [GO:0016477
"cell migration" evidence=IMP] [GO:0070831 "basement membrane
assembly" evidence=IMP] [GO:0048513 "organ development"
evidence=IMP] [GO:0008406 "gonad development" evidence=IMP]
GO:GO:0016477 GO:GO:0008406 EMBL:AE014134 GO:GO:0007155
InterPro:IPR013032 PROSITE:PS00022 GO:GO:0005605 PROSITE:PS01186
InterPro:IPR002049 Pfam:PF00053 SMART:SM00180 PROSITE:PS01248
PROSITE:PS50027 InterPro:IPR008211 Pfam:PF00055 SMART:SM00136
PROSITE:PS51117 eggNOG:NOG241384 EMBL:M95811 EMBL:M19525
EMBL:BT015222 EMBL:AY095001 PIR:A28783 RefSeq:NP_476618.1
RefSeq:NP_723319.1 ProteinModelPortal:P11046 SMR:P11046
IntAct:P11046 MINT:MINT-749338 STRING:P11046 PaxDb:P11046
PRIDE:P11046 EnsemblMetazoa:FBtr0079490 EnsemblMetazoa:FBtr0079491
GeneID:34068 KEGG:dme:Dmel_CG7123 CTD:34068 FlyBase:FBgn0261800
GeneTree:ENSGT00620000087753 InParanoid:P11046 KO:K05636
OMA:DQCAENH OrthoDB:EOG4ZPC92 PhylomeDB:P11046 ChiTaRS:LanB1
GenomeRNAi:34068 NextBio:786713 Bgee:P11046 GermOnline:CG7123
GO:GO:0070831 InterPro:IPR013015 PROSITE:PS51116 Uniprot:P11046
Length = 1788
Score = 225 (84.3 bits), Expect = 1.3e-28, Sum P(2) = 1.3e-28
Identities = 50/122 (40%), Positives = 67/122 (54%)
Query: 200 GRCKCNGHASRCIK-SP---QGE----LV---CECRHNTAGKDCEKCKPFFSDRPWGRAT 248
G C C GHAS+C+ P Q + +V CEC HNT G +CE+C+ FF+D PW A
Sbjct: 286 GSCSCYGHASQCLPLDPAFSQADNEDGMVHGRCECTHNTKGMNCEECEDFFNDLPWKPAF 345
Query: 249 VYDANECKGGRCKCNGHASRC-----IKSPQGAL---VCE-CRHNTAGKDCEKCKPFFSD 299
N CK +C+CN HA C + + G + VC+ C HNT G+ CE+C P+F
Sbjct: 346 GKKTNACK--KCECNDHAVSCHFDEAVFTASGFVSGGVCDNCLHNTRGQHCEECMPYFYR 403
Query: 300 RP 301
P
Sbjct: 404 DP 405
Score = 158 (60.7 bits), Expect = 1.3e-28, Sum P(2) = 1.3e-28
Identities = 46/182 (25%), Positives = 88/182 (48%)
Query: 23 LNSDPCYENGRPRRCIPDFVNAAFGQEVKV--NSVCGLESPERYCDTSGA----CHVCDA 76
+ + PC + C P N G+E ++ +S CGL SPER+C S C +CD
Sbjct: 44 IKTHPCERSS----CYPATGNLLIGRENRLTASSTCGLHSPERFCILSHLQDKKCFLCDT 99
Query: 77 GSPRGRFPAEYLTDLNNPSNVTCWRSEAQTSVNSLSASP---DNVTLTLSLGKKFELTYI 133
P + N+ ++++ T++ + S +N T+ L L +F T++
Sbjct: 100 REETKHDPYK-----NHRIGQIIYKTKPGTNIPTWWQSENGKENATIQLDLEAEFHFTHL 154
Query: 134 SLSFCPKSIKPDSLAIYKSQDFGKSWQPLQFYSSQCKKLYGRTATGVISRGNEQEALCTD 193
++F + +P ++ I +S DFG++W ++++ CK+ + T V+ N + +CT
Sbjct: 155 IITFT--TFRPAAMYIERSFDFGQTWHIYRYFAYDCKESFPGVPT-VLE--NITDVMCTS 209
Query: 194 RH 195
R+
Sbjct: 210 RY 211
Score = 141 (54.7 bits), Expect = 9.4e-18, Sum P(2) = 9.4e-18
Identities = 29/68 (42%), Positives = 37/68 (54%)
Query: 258 GRCKCNGHASRCIK-SP-------QGALV---CECRHNTAGKDCEKCKPFFSDRPWGRAT 306
G C C GHAS+C+ P + +V CEC HNT G +CE+C+ FF+D PW A
Sbjct: 286 GSCSCYGHASQCLPLDPAFSQADNEDGMVHGRCECTHNTKGMNCEECEDFFNDLPWKPAF 345
Query: 307 VYDANECK 314
N CK
Sbjct: 346 GKKTNACK 353
Score = 134 (52.2 bits), Expect = 5.1e-17, Sum P(2) = 5.1e-17
Identities = 40/134 (29%), Positives = 63/134 (47%)
Query: 173 YGRTATGVISRGNEQEALCTDRHKKQGGR-CKCNGHASRCIKSPQGELV---CECRHNTA 228
Y + V+ R +Q A T +G + C CN S K +L+ C+C NT
Sbjct: 807 YCQCKPNVVGRQCDQCAPGTYGFGPEGCKACDCNSIGS---KDKYCDLITGQCQCVPNTY 863
Query: 229 GKDCEKCKPFFSDRPWGRATVYDANECKGGRCKCNGHASRCIKSP-QGALVCECRHNTAG 287
G++C +C+P + + P EC+ C+CNGHA+ C P QG + +C+ +T G
Sbjct: 864 GRECNQCQPGYWNFP----------ECRV--CQCNGHAATC--DPIQGTCI-DCQDSTTG 908
Query: 288 KDCEKCKPFFSDRP 301
C+ C + P
Sbjct: 909 YSCDSCLDGYYGNP 922
Score = 126 (49.4 bits), Expect = 3.4e-16, Sum P(2) = 3.4e-16
Identities = 29/104 (27%), Positives = 47/104 (45%)
Query: 202 CKCNGHASRCIKSP-QGELVCECRHNTAGKDCEKCKPFFSDRPWGRATVYDANECKGGRC 260
C+CNGHA+ C P QG + +C+ +T G C+ C + P + + C+
Sbjct: 883 CQCNGHAATC--DPIQGTCI-DCQDSTTGYSCDSCLDGYYGNPLFGSEI-GCRPCRCPET 938
Query: 261 KCNG--HASRC-IKSPQGALVCECRHNTAGKDCEKCKPFFSDRP 301
+G HA C + + ++C C+ +G CE C F P
Sbjct: 939 VASGLAHADGCSLDTRNNNMLCHCQEGYSGSRCEICADNFFGNP 982
Score = 121 (47.7 bits), Expect = 1.1e-15, Sum P(2) = 1.1e-15
Identities = 30/102 (29%), Positives = 47/102 (46%)
Query: 202 CKCN--GHASRCIKSPQGELVCECRHNTAGKDCEKCKPFFSDRPWGRATVYDANECKGGR 259
C CN G S+ +S G C+C+ N G+ C++C P +G + CK
Sbjct: 789 CNCNPTGSLSKVCESNGG--YCQCKPNVVGRQCDQCAP----GTYG----FGPEGCKA-- 836
Query: 260 CKCNGHASRCIKSPQGALVCECRHNTAGKDCEKCKPFFSDRP 301
C CN S+ C+C NT G++C +C+P + + P
Sbjct: 837 CDCNSIGSKDKYCDLITGQCQCVPNTYGRECNQCQPGYWNFP 878
Score = 96 (38.9 bits), Expect = 4.5e-13, Sum P(2) = 4.5e-13
Identities = 28/100 (28%), Positives = 42/100 (42%)
Query: 207 HASRC-IKSPQGELVCECRHNTAGKDCEKCKPFFSDRPWGRATVYDANECKGGRCKCNGH 265
HA C + + ++C C+ +G CE C F P T C +C+C+ +
Sbjct: 945 HADGCSLDTRNNNMLCHCQEGYSGSRCEICADNFFGNPDNGGT------CS--KCECSNN 996
Query: 266 AS-----RCIKSPQGALVCECRHNTAGKDCEKCKP-FFSD 299
C + GA + +C + T G CE CK FF D
Sbjct: 997 VDLYDTGNCDRQT-GACL-KCLYQTTGDHCELCKDGFFGD 1034
Score = 86 (35.3 bits), Expect = 4.9e-12, Sum P(2) = 4.9e-12
Identities = 26/80 (32%), Positives = 36/80 (45%)
Query: 221 CECRHNTAGKDCEKCKPFFSDRPWGRATVYDANE-CKGGRCKCN--G--HASRCIKSPQG 275
C C+ G+ C +CK D W + D E C+ C CN G + S C+ G
Sbjct: 446 CHCKAFVTGRRCNQCK----DGYWNLQS--DNPEGCEP--CTCNPLGTLNNSGCVMRT-G 496
Query: 276 ALVCECRHNTAGKDCEKCKP 295
C+C+ GKDC +C P
Sbjct: 497 E--CKCKKYVTGKDCNQCMP 514
Score = 83 (34.3 bits), Expect = 9.9e-12, Sum P(2) = 9.9e-12
Identities = 27/97 (27%), Positives = 38/97 (39%)
Query: 202 CKCN--G--HASRCIKSPQGELVCECRHNTAGKDCEKCKPFFSDRPWGRATVYDANECKG 257
C CN G + S C+ GE C+C+ GKDC +C P +G + + C
Sbjct: 478 CTCNPLGTLNNSGCVMRT-GE--CKCKKYVTGKDCNQCMP----ETYGLSESPEG--CSL 528
Query: 258 GRCKCNGHASRCIKSPQGALVCECRHNTAGKDCEKCK 294
C G G C CR + G+ C + K
Sbjct: 529 CNCDAGGSYDNYCDVISGQ--CRCRPHMTGRSCSQPK 563
Score = 78 (32.5 bits), Expect = 3.3e-11, Sum P(2) = 3.3e-11
Identities = 25/92 (27%), Positives = 39/92 (42%)
Query: 221 CECRHNTAGKDCEKCKPFFSDRPWGRATVYDANECK----GG-RCKCNGHASRCIKSPQ- 274
C C N G C++C ++ W A+ C G +CN + +C P
Sbjct: 1064 CPCLPNVQGVRCDQC----AENHWKIASGEGCESCNCDPIGALHEQCNSYTGQCQCKPGF 1119
Query: 275 GALVC-ECRHNTAGKDCEKCKPFFSDRPWGRA 305
G C +C+ + G EKC+P D+ +G A
Sbjct: 1120 GGRACNQCQAHYWGNPNEKCQPCECDQ-FGAA 1150
Score = 43 (20.2 bits), Expect = 1.3e-07, Sum P(2) = 1.3e-07
Identities = 19/79 (24%), Positives = 24/79 (30%)
Query: 200 GRCKCN-GHASRCIKSPQGELVCECRHNTAGKDCEK--CKPFFSDRPWGRATV------Y 250
G+C+C G R Q +C++ F DR G Y
Sbjct: 1111 GQCQCKPGFGGRACNQCQAHYWGNPNEKCQPCECDQFGAADFQCDRETGNCVCHEGIGGY 1170
Query: 251 DANECKGGRCKCNGHASRC 269
NEC G H S C
Sbjct: 1171 KCNECARGYIGQFPHCSPC 1189
>FB|FBgn0002528 [details] [associations]
symbol:LanB2 "Laminin B2" species:7227 "Drosophila
melanogaster" [GO:0005604 "basement membrane" evidence=ISS;NAS;IDA]
[GO:0031012 "extracellular matrix" evidence=IDA] [GO:0005605 "basal
lamina" evidence=IDA] [GO:0009887 "organ morphogenesis"
evidence=NAS] [GO:0009888 "tissue development" evidence=NAS]
[GO:0048598 "embryonic morphogenesis" evidence=NAS] EMBL:AE014296
GO:GO:0007155 InterPro:IPR013032 PROSITE:PS00022 GO:GO:0005605
PROSITE:PS01186 InterPro:IPR002049 Pfam:PF00053 SMART:SM00180
PROSITE:PS01248 PROSITE:PS50027 InterPro:IPR009030 SUPFAM:SSF57184
InterPro:IPR018031 InterPro:IPR000034 InterPro:IPR008211
Pfam:PF00052 Pfam:PF00055 SMART:SM00281 SMART:SM00136
PROSITE:PS51115 PROSITE:PS51117 eggNOG:NOG235720
GeneTree:ENSGT00690000102103 OMA:DRCKENK KO:K05635 EMBL:M58417
EMBL:M25063 EMBL:BT021394 PIR:A31483 RefSeq:NP_524006.1
UniGene:Dm.2551 ProteinModelPortal:P15215 SMR:P15215 DIP:DIP-21994N
IntAct:P15215 MINT:MINT-810240 STRING:P15215 PaxDb:P15215
PRIDE:P15215 EnsemblMetazoa:FBtr0076382 GeneID:39118
KEGG:dme:Dmel_CG3322 CTD:39118 FlyBase:FBgn0002528
HOGENOM:HOG000264193 InParanoid:P15215 OrthoDB:EOG434TMX
PhylomeDB:P15215 GenomeRNAi:39118 NextBio:812009 Bgee:P15215
GermOnline:CG3322 Uniprot:P15215
Length = 1639
Score = 333 (122.3 bits), Expect = 1.4e-28, P = 1.4e-28
Identities = 92/308 (29%), Positives = 146/308 (47%)
Query: 28 CYEN-GRPRRCIPDFVNAAFGQEVKVNSVCGLESPERYC-DTSGACHV-CDAGSPRGRFP 84
CY+ GRP++C+P+F+NAA+ +++ + CG ++ +C T H C+ P
Sbjct: 57 CYDPYGRPQKCLPEFINAAYQLQIESTNTCGEQNDNHFCIQTMNQNHKNCEFCKYNDHNP 116
Query: 85 AEYLTDLNNPSNVTCWRSEAQTSVNSLSASPDNVTLTLSLGKKFELTYISLSFCPKSIKP 144
+ +LTDL++P + T W+SE T + P+ V LTL LGK +++TY+ + F +
Sbjct: 117 S-FLTDLHDPQSPTWWQSE--TMFEGIQ-HPNYVNLTLHLGKSYDITYVRILFRSPRPES 172
Query: 145 DSLAIYKSQDFGK--SWQPLQFYSSQCKKLYGRTATGVISRGNEQEALCTDRHKK----Q 198
++ ++ + G +Q L A + E ALCT + +
Sbjct: 173 FTI-YKRTSESGPWIPYQFYSATCRDTYSLPDSRA--IRKGEGEAHALCTSEYSDISPLR 229
Query: 199 GGRCKCN---GHASRCIKSPQGELVCECRHNTAGKDCEKCKPF----FSDRPWGRATVYD 251
G + G S GEL ++ F F D ++ Y
Sbjct: 230 DGEIAFSTLEGRPSGINFERSGELQEWVTATDIRITLDRLNTFGDELFGDSQVLKSYFYA 289
Query: 252 ANECK-GGRCKCNGHASRCIKSP----QGALVCECRHNTAGKDCEKCKPFFSDRPWGRAT 306
++ G RCKCNGHAS+C+ S + LVCECRHNT G DC++C P ++D W R+T
Sbjct: 290 ISDIAVGARCKCNGHASKCVPSTGMHGERTLVCECRHNTDGPDCDRCLPLYNDLKWKRST 349
Query: 307 VYDANECK 314
+ NECK
Sbjct: 350 STEVNECK 357
Score = 278 (102.9 bits), Expect = 9.7e-23, P = 9.7e-23
Identities = 54/116 (46%), Positives = 68/116 (58%)
Query: 199 GGRCKCNGHASRCIKSP--QGE--LVCECRHNTAGKDCEKCKPFFSDRPWGRATVYDANE 254
G RCKCNGHAS+C+ S GE LVCECRHNT G DC++C P ++D W R+T + NE
Sbjct: 296 GARCKCNGHASKCVPSTGMHGERTLVCECRHNTDGPDCDRCLPLYNDLKWKRSTSTEVNE 355
Query: 255 CKGGRCKCNGHASRCI-------KSPQGALVCECRHNTAGKDCEKCKPFFSDRPWG 303
CK C CNG A +C ++ G +CR N G +CE+CK F R G
Sbjct: 356 CKA--CNCNGLADKCFFDANLFNRTGHGGHCLDCRENRDGPNCERCKENFYMRDDG 409
Score = 159 (61.0 bits), Expect = 4.4e-08, P = 4.4e-08
Identities = 40/115 (34%), Positives = 56/115 (48%)
Query: 202 CKCNGHASRCIKSPQGELVCECRHNTAGKDCEKCKPFFSDRPWGRATVYDANECKGGRCK 261
C C+GHA C S G C C+HNT G +C++C F +G A N+CK RC
Sbjct: 744 CDCHGHADIC-DSETGR--CICQHNTHGDNCDQCAKGF----YGNALGGTPNDCK--RCP 794
Query: 262 CNGHASRCIKSPQGALVC-ECRHNTAGKDCEKCKP-FFSDRPWGRATVYDANECK 314
C + C++ + ++C EC G CE+C FF D P G + + CK
Sbjct: 795 CPNDGA-CLQINEDTVICTECPKGYFGSRCEQCSDGFFGD-PTG--LLGEVQTCK 845
Score = 138 (53.6 bits), Expect = 9.6e-06, P = 9.6e-06
Identities = 49/176 (27%), Positives = 73/176 (41%)
Query: 140 KSIKPDSLAIYKSQDFGKSWQPLQFYSSQCKKLYGRTATGVISRGNEQ-EALCTDRHKKQ 198
+ +K + +++ D+ WQP Q L TA + + + Q EA+ D +
Sbjct: 637 QGVKEYTFRLHEHHDY--QWQPSQSARGFLSILSNLTAIKIRATYSVQGEAILDDVELQT 694
Query: 199 GGRCKCNGHASRCIKSPQGELVCECRHNTAGKDCEKCKPFFSDRPWGRATVYDANECKGG 258
R GH + I+ C C G+ CE C P + P R + C
Sbjct: 695 AHRGAA-GHPATWIEQ------CTCPEGYLGQFCESCAPGYRHSP-ARGGPF--MPCIP- 743
Query: 259 RCKCNGHASRCIKSPQGALVCECRHNTAGKDCEKCKPFFSDRPWGRATVYDANECK 314
C C+GHA C S G C C+HNT G +C++C F +G A N+CK
Sbjct: 744 -CDCHGHADIC-DSETGR--CICQHNTHGDNCDQCAKGF----YGNALGGTPNDCK 791
>MGI|MGI:99916 [details] [associations]
symbol:Lamb2 "laminin, beta 2" species:10090 "Mus musculus"
[GO:0000904 "cell morphogenesis involved in differentiation"
evidence=IGI] [GO:0005178 "integrin binding" evidence=IPI]
[GO:0005576 "extracellular region" evidence=IEA] [GO:0005578
"proteinaceous extracellular matrix" evidence=IEA] [GO:0005604
"basement membrane" evidence=ISO;IDA] [GO:0005605 "basal lamina"
evidence=IDA] [GO:0005608 "laminin-3 complex" evidence=ISO;IDA]
[GO:0007155 "cell adhesion" evidence=IEA] [GO:0007411 "axon
guidance" evidence=IGI] [GO:0007528 "neuromuscular junction
development" evidence=IMP] [GO:0007601 "visual perception"
evidence=IGI] [GO:0014002 "astrocyte development" evidence=IGI]
[GO:0014044 "Schwann cell development" evidence=IDA] [GO:0031175
"neuron projection development" evidence=IDA] [GO:0043256 "laminin
complex" evidence=IDA] [GO:0045202 "synapse" evidence=IDA]
[GO:0048677 "axon extension involved in regeneration" evidence=IMP]
[GO:0050808 "synapse organization" evidence=IMP] [GO:0060041
"retina development in camera-type eye" evidence=IGI] [GO:0072249
"metanephric glomerular visceral epithelial cell development"
evidence=IMP] [GO:0072274 "metanephric glomerular basement membrane
development" evidence=IMP] MGI:MGI:99916 GO:GO:0007411
GO:GO:0007528 GO:GO:0007601 GO:GO:0007155 GO:GO:0045202
PROSITE:PS00022 GO:GO:0060041 PROSITE:PS01186 InterPro:IPR002049
Pfam:PF00053 SMART:SM00180 PROSITE:PS01248 PROSITE:PS50027
EMBL:CH466560 GO:GO:0014044 GO:GO:0014002 InterPro:IPR008211
Pfam:PF00055 SMART:SM00136 PROSITE:PS51117 GO:GO:0005608
eggNOG:NOG241384 HOGENOM:HOG000007552 GeneTree:ENSGT00620000087753
InterPro:IPR013015 PROSITE:PS51116 HOVERGEN:HBG052301 CTD:3913
KO:K06243 OMA:QPYCIVS OrthoDB:EOG4KSPHW ChiTaRS:LAMB2 GO:GO:0048677
GO:GO:0072274 GO:GO:0072249 EMBL:U43541 EMBL:U42624 EMBL:BC026051
EMBL:X75928 IPI:IPI00119065 PIR:I48749 RefSeq:NP_032509.2
UniGene:Mm.425599 ProteinModelPortal:Q61292 SMR:Q61292
STRING:Q61292 PhosphoSite:Q61292 PaxDb:Q61292 PRIDE:Q61292
Ensembl:ENSMUST00000065014 GeneID:16779 KEGG:mmu:16779
InParanoid:Q8R0Y0 NextBio:290628 Bgee:Q61292 CleanEx:MM_LAMB2
Genevestigator:Q61292 GermOnline:ENSMUSG00000052911 Uniprot:Q61292
Length = 1799
Score = 230 (86.0 bits), Expect = 1.5e-28, Sum P(2) = 1.5e-28
Identities = 47/119 (39%), Positives = 66/119 (55%)
Query: 200 GRCKCNGHASRCIKSP------QGEL--VCECRHNTAGKDCEKCKPFFSDRPWGRATVYD 251
G C C GHAS+C +P +G + C C+HNT G +CE+C+ F+ D PW A
Sbjct: 284 GNCFCYGHASQCAPAPGAPAHAEGMVHGACICKHNTRGLNCEQCQDFYQDLPWHPAEDGH 343
Query: 252 ANECKGGRCKCNGHASRC-----IKSPQGAL---VCE-CRHNTAGKDCEKCKPFFSDRP 301
+ C+ +C+CNGH C + G + VC+ C+HNTAG+ CE C+PFF P
Sbjct: 344 THACR--KCECNGHTHSCHFDMAVYLASGNVSGGVCDGCQHNTAGRHCEFCRPFFYRDP 400
Score = 147 (56.8 bits), Expect = 2.3e-16, Sum P(2) = 2.3e-16
Identities = 39/121 (32%), Positives = 54/121 (44%)
Query: 193 DRHKKQGGRCKCNGHASRC-----IKSPQGEL---VCE-CRHNTAGKDCEKCKPFFSDRP 243
D H +C+CNGH C + G + VC+ C+HNTAG+ CE C+PFF P
Sbjct: 341 DGHTHACRKCECNGHTHSCHFDMAVYLASGNVSGGVCDGCQHNTAGRHCEFCRPFFYRDP 400
Query: 244 WGRATVYDANECKGGRCKCNGH--ASRCIK--SPQGALV---CECRHNTAGKDCEKCKPF 296
+ D C+ C G RC P LV C C+ + G C++C+
Sbjct: 401 --TKDMRDPAVCRPCDCDPMGSQDGGRCDSHDDPVLGLVSGQCRCKEHVVGTRCQQCRDG 458
Query: 297 F 297
F
Sbjct: 459 F 459
Score = 140 (54.3 bits), Expect = 1.5e-28, Sum P(2) = 1.5e-28
Identities = 38/141 (26%), Positives = 68/141 (48%)
Query: 37 CIPDFVNAAFGQ--EVKVNSVCGLESPERYCDTSGA-----CHVCDAGSPRGRFPAEYLT 89
C P + G+ + +S CGL SP+ YC S C +CD+ P F A
Sbjct: 50 CYPATGDLLVGRADRLTASSTCGLHSPQPYCIVSHLQDEKKCFLCDSRRP---FSARDNP 106
Query: 90 DLNNPSNV-TCWRSEAQTSVNSLSASPDNVTLTLSLGKKFELTYISLSFCPKSIKPDSLA 148
+ + NV T + + +T+ VT+ L L +F T++ ++F K+ +P ++
Sbjct: 107 NSHRIQNVVTSFAPQRRTAWWQSENGVPMVTIQLDLEAEFHFTHLIMTF--KTFRPAAML 164
Query: 149 IYKSQDFGKSWQPLQFYSSQC 169
+ +S DFG++W +++S C
Sbjct: 165 VERSADFGRTWHVYRYFSYDC 185
Score = 133 (51.9 bits), Expect = 7.8e-15, Sum P(2) = 7.8e-15
Identities = 25/65 (38%), Positives = 36/65 (55%)
Query: 258 GRCKCNGHASRCIKSP------QGAL--VCECRHNTAGKDCEKCKPFFSDRPWGRATVYD 309
G C C GHAS+C +P +G + C C+HNT G +CE+C+ F+ D PW A
Sbjct: 284 GNCFCYGHASQCAPAPGAPAHAEGMVHGACICKHNTRGLNCEQCQDFYQDLPWHPAEDGH 343
Query: 310 ANECK 314
+ C+
Sbjct: 344 THACR 348
Score = 116 (45.9 bits), Expect = 4.5e-13, Sum P(2) = 4.5e-13
Identities = 33/99 (33%), Positives = 41/99 (41%)
Query: 218 ELVCECRHNTAGKDCEKCKP-FFSD--RPWGRATVYDANECKGGRCKCNGHASRCIKSPQ 274
++VC+CR G CE C P F D +P GR + EC G + A C P
Sbjct: 952 QIVCQCREGYTGLRCEACAPGHFGDPSKPGGRCQLC---ECSGNIDPMDPDA--C--DPH 1004
Query: 275 GALVCECRHNTAGKDCEKCKPFFSDRPWGRATVYDANEC 313
C HNT G C CKP F G+A + C
Sbjct: 1005 TGQCLRCLHNTEGPHCGYCKPGFH----GQAARQSCHRC 1039
Score = 112 (44.5 bits), Expect = 1.2e-12, Sum P(2) = 1.2e-12
Identities = 28/107 (26%), Positives = 46/107 (42%)
Query: 191 CTDRHKKQGGRCKCNGHASRCIKSPQGELVCECRHNTAGKDCEKCKPFFSDRPWGRATVY 250
C + GGRC + H + G+ C C+ + G C++C+ F +G +
Sbjct: 415 CDPMGSQDGGRC--DSHDDPVLGLVSGQ--CRCKEHVVGTRCQQCRDGF----FG-LSAS 465
Query: 251 DANECKGGRCKCNGHASRCIKSP--QGALVCECRHNTAGKDCEKCKP 295
D C+ RC+CN + SP + C C+ G C++C P
Sbjct: 466 DPRGCQ--RCQCNSRGTVPGSSPCDSSSGTCFCKRLVTGHGCDRCLP 510
Score = 101 (40.6 bits), Expect = 1.6e-11, Sum P(2) = 1.6e-11
Identities = 28/104 (26%), Positives = 42/104 (40%)
Query: 201 RCKCNGHASRCIKSP--QGELVCECRHNTAGKDCEKCKPFFSDRPWGRATVYDANECKGG 258
RC+CN + SP C C+ G C++C P WG + +D C+
Sbjct: 472 RCQCNSRGTVPGSSPCDSSSGTCFCKRLVTGHGCDRCLPGH----WGLS--HDLLGCRPC 525
Query: 259 RCKCNGHASRCIKSPQGALVCECRHNTAGKDCEKCKPFFSDRPW 302
C G G C CR + G+ CE+ +P + RP+
Sbjct: 526 DCDVGGALDPQCDEATGQ--CRCRQHMIGRRCEQVQPGYF-RPF 566
Score = 101 (40.6 bits), Expect = 1.6e-11, Sum P(2) = 1.6e-11
Identities = 42/144 (29%), Positives = 58/144 (40%)
Query: 166 SSQCKKLYG--RTATGVISRGNEQEALCTDRHKKQG--G--RCKCN--GHASRCIKSPQG 217
SS+C G R GV+ R + +C + G G C+C+ G S + G
Sbjct: 793 SSECSPHGGQCRCKPGVVGRRCD---VCATGYYGFGPAGCQACQCSPDGALSALCEGTSG 849
Query: 218 ELVCECRHNTAGKDCEKCKPFFSDRPWGRATVYDANECKGGRCKCNGHASRCIKSPQGAL 277
+ C CR G C+ C+ WG C+ C CNG A C + GA
Sbjct: 850 Q--CPCRPGAFGLRCDHCQR----GQWGFPN------CRP--CVCNGRADEC-DTHTGAC 894
Query: 278 VCECRHNTAGKDCEKCKPFFSDRP 301
+ CR T G+ CE+C F P
Sbjct: 895 L-GCRDYTGGEHCERCIAGFHGDP 917
Score = 96 (38.9 bits), Expect = 5.3e-11, Sum P(2) = 5.3e-11
Identities = 38/123 (30%), Positives = 46/123 (37%)
Query: 197 KQGGRCK---CNGHASRCIKS---PQGELVCECRHNTAGKDCEKCKPFFSDRPWGRATVY 250
K GGRC+ C+G+ P C HNT G C CKP F G+A
Sbjct: 979 KPGGRCQLCECSGNIDPMDPDACDPHTGQCLRCLHNTEGPHCGYCKPGFH----GQAA-- 1032
Query: 251 DANECKGGRCKCN--GHASR-------CIKSPQGALVCECRHNTAGKDCEKCKPFFSDRP 301
C RC CN G R C P C C + G +C+ C P F +
Sbjct: 1033 -RQSCH--RCTCNLLGTDPRRCPSTDLCHCDPSTGQ-CPCLPHVQGLNCDHCAPNFWNFT 1088
Query: 302 WGR 304
GR
Sbjct: 1089 SGR 1091
Score = 85 (35.0 bits), Expect = 7.2e-10, Sum P(2) = 7.2e-10
Identities = 29/104 (27%), Positives = 42/104 (40%)
Query: 200 GR-CK-CNGHASRCIKSPQGELV--CECRHNTAGKDCEKCKPFFSDRPWGRATVYDANEC 255
GR C+ C H SR E C C G+ C +C+ + WG + +C
Sbjct: 1090 GRGCQPCACHPSRARGPTCNEFTGQCHCHAGFGGRTCSECQELY----WGDPGL----QC 1141
Query: 256 KGGRCKCNG-HASRCIKSPQGALVCECRHNTAGKDCEKCKPFFS 298
+ C G +C +S G C CR +G C++C FS
Sbjct: 1142 RACDCDPRGIDKPQCHRST-GH--CSCRPGVSGVRCDQCARGFS 1182
Score = 83 (34.3 bits), Expect = 1.2e-09, Sum P(2) = 1.2e-09
Identities = 24/95 (25%), Positives = 38/95 (40%)
Query: 202 CKCNGHASRCIK-SPQGELVCECRHNTAGKDCEKCKP-FFSDRPWGRATVYDANECKGGR 259
C+C+ S + SP G C C+ G+ C+ C ++ P G C+ +
Sbjct: 784 CQCDPQGSLSSECSPHGGQ-CRCKPGVVGRRCDVCATGYYGFGPAG---------CQACQ 833
Query: 260 CKCNGHASRCIKSPQGALVCECRHNTAGKDCEKCK 294
C +G S + G C CR G C+ C+
Sbjct: 834 CSPDGALSALCEGTSGQ--CPCRPGAFGLRCDHCQ 866
Score = 74 (31.1 bits), Expect = 9.9e-09, Sum P(2) = 9.9e-09
Identities = 26/111 (23%), Positives = 41/111 (36%)
Query: 201 RCKCNGHASRCIKSPQGELV--------CECRHNTAGKDCEKCKPFFSDRPWGRATVYDA 252
RC CN + + P +L C C + G +C+ C P F + GR
Sbjct: 1038 RCTCNLLGTDPRRCPSTDLCHCDPSTGQCPCLPHVQGLNCDHCAPNFWNFTSGRG----- 1092
Query: 253 NECKGGRCKCNGHASRCIKSPQGALVCECRHNTAGKDCEKCKPFFSDRPWG 303
C+ C C+ +R + C C G+ C +C+ + WG
Sbjct: 1093 --CQP--CACHPSRARGPTCNEFTGQCHCHAGFGGRTCSECQELY----WG 1135
Score = 71 (30.1 bits), Expect = 2.0e-08, Sum P(2) = 2.0e-08
Identities = 33/120 (27%), Positives = 43/120 (35%)
Query: 177 ATGVISRGNEQEALCTDRHKKQGGRCK-CN-GHASRCIKSPQGEL-VCECRHNTAGKDCE 233
AT G Q+ +C R G RC+ C GH K P G +CEC N D +
Sbjct: 941 ATSCHRDGYSQQIVCQCREGYTGLRCEACAPGHFGDPSK-PGGRCQLCECSGNIDPMDPD 999
Query: 234 KCKPFFSDRPWGRATVYDANECKGGRCKCNGHASRCIKSPQGALVCECRHNTAGKDCEKC 293
C P +++ G CK H + Q C C N G D +C
Sbjct: 1000 ACDPHTGQC---LRCLHNTEGPHCGYCKPGFHGQA---ARQSCHRCTC--NLLGTDPRRC 1051
>MGI|MGI:105382 [details] [associations]
symbol:Lama5 "laminin, alpha 5" species:10090 "Mus musculus"
[GO:0001658 "branching involved in ureteric bud morphogenesis"
evidence=IMP] [GO:0001738 "morphogenesis of a polarized epithelium"
evidence=IMP] [GO:0001755 "neural crest cell migration"
evidence=IMP] [GO:0001942 "hair follicle development" evidence=IMP]
[GO:0005102 "receptor binding" evidence=IEA] [GO:0005178 "integrin
binding" evidence=ISO;IDA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0005576 "extracellular region" evidence=IEA]
[GO:0005578 "proteinaceous extracellular matrix" evidence=IDA]
[GO:0005604 "basement membrane" evidence=ISO;IDA] [GO:0005605
"basal lamina" evidence=IDA] [GO:0005606 "laminin-1 complex"
evidence=IEA] [GO:0005610 "laminin-5 complex" evidence=ISO]
[GO:0005615 "extracellular space" evidence=ISO] [GO:0007155 "cell
adhesion" evidence=IEA] [GO:0007229 "integrin-mediated signaling
pathway" evidence=ISO] [GO:0007517 "muscle organ development"
evidence=IMP] [GO:0009887 "organ morphogenesis" evidence=IMP]
[GO:0016331 "morphogenesis of embryonic epithelium" evidence=IMP]
[GO:0016477 "cell migration" evidence=ISO] [GO:0030155 "regulation
of cell adhesion" evidence=IEA] [GO:0030324 "lung development"
evidence=IMP] [GO:0030334 "regulation of cell migration"
evidence=IEA] [GO:0034446 "substrate adhesion-dependent cell
spreading" evidence=ISO] [GO:0042127 "regulation of cell
proliferation" evidence=IMP] [GO:0042384 "cilium assembly"
evidence=IMP] [GO:0042475 "odontogenesis of dentin-containing
tooth" evidence=IMP] [GO:0043259 "laminin-10 complex"
evidence=ISO;IPI] [GO:0045995 "regulation of embryonic development"
evidence=IEA] [GO:0048754 "branching morphogenesis of an epithelial
tube" evidence=IMP] [GO:0060445 "branching involved in salivary
gland morphogenesis" evidence=IMP] [GO:0090002 "establishment of
protein localization to plasma membrane" evidence=IMP]
InterPro:IPR009254 InterPro:IPR010307 Pfam:PF06008 Pfam:PF06009
MGI:MGI:105382 GO:GO:0005615 GO:GO:0030155 GO:GO:0030324
GO:GO:0001755 InterPro:IPR013032 PROSITE:PS00022 GO:GO:0042127
Gene3D:2.60.120.200 InterPro:IPR008985 InterPro:IPR013320
SUPFAM:SSF49899 GO:GO:0030334 GO:GO:0001942 GO:GO:0007517
GO:GO:0005178 PROSITE:PS01186 GO:GO:0007229 GO:GO:0042475
EMBL:AL663027 InterPro:IPR002049 InterPro:IPR001791 Pfam:PF00053
SMART:SM00180 SMART:SM00282 PROSITE:PS01248 PROSITE:PS50027
PROSITE:PS50025 GO:GO:0042384 GO:GO:0001738 GO:GO:0034446
GO:GO:0090002 GO:GO:0016331 GO:GO:0001658 GO:GO:0060445
Pfam:PF02210 GO:GO:0045995 eggNOG:NOG292643
GeneTree:ENSGT00700000104140 InterPro:IPR018031 InterPro:IPR000034
InterPro:IPR008211 Pfam:PF00052 Pfam:PF00055 SMART:SM00281
SMART:SM00136 PROSITE:PS51115 PROSITE:PS51117 GO:GO:0005606
HOGENOM:HOG000231235 HOVERGEN:HBG052300 KO:K06240 CTD:3911
OMA:LRHTTGP OrthoDB:EOG4VHK5G ChiTaRS:LAMA5 GO:GO:0043259
EMBL:AJ293593 EMBL:U37501 IPI:IPI00116913 PIR:T10053
RefSeq:NP_001074640.1 UniGene:Mm.4339 PDB:2Y38 PDBsum:2Y38
ProteinModelPortal:Q61001 SMR:Q61001 STRING:Q61001
PhosphoSite:Q61001 PaxDb:Q61001 PRIDE:Q61001
Ensembl:ENSMUST00000015791 GeneID:16776 KEGG:mmu:16776
InParanoid:A2ABW7 EvolutionaryTrace:Q61001 NextBio:290620
Bgee:Q61001 CleanEx:MM_LAMA5 Genevestigator:Q61001
GermOnline:ENSMUSG00000015647 Uniprot:Q61001
Length = 3718
Score = 239 (89.2 bits), Expect = 1.5e-28, Sum P(2) = 1.5e-28
Identities = 51/122 (41%), Positives = 64/122 (52%)
Query: 199 GGRCKCNGHASRC-IKSPQG--ELVCECRHNTAGKDCEKCKPFFSDRPWGRATVYDANEC 255
GGRC C+GHA C K P L C C+HNT G C++C P F+ +PW AT ANEC
Sbjct: 302 GGRCVCHGHADVCDAKDPLDPFRLQCACQHNTCGGSCDRCCPGFNQQPWKPATTDSANEC 361
Query: 256 KGGRCKCNGHASRCIKSP---------------QGALVC-ECRHNTAGKDCEKCKPFFSD 299
+ C C+GHA C P QG VC +C+H+T G +CE+C P F
Sbjct: 362 QS--CNCHGHAYDCYYDPEVDRRNASQNQDNVYQGGGVCLDCQHHTTGINCERCLPGFFR 419
Query: 300 RP 301
P
Sbjct: 420 AP 421
Score = 167 (63.8 bits), Expect = 3.5e-17, Sum P(2) = 3.5e-17
Identities = 36/101 (35%), Positives = 48/101 (47%)
Query: 202 CKCNGHASRCIKSPQGELVCECRHNTAGKDCEKCKP-FFSDRPWGRATVYDANECKGGRC 260
C+C+GH+ RC+ P + C+HNT G CE+C+P F S P A+ + C
Sbjct: 1865 CQCHGHSDRCL--PGSGICVGCQHNTEGDQCERCRPGFVSSDPSNPASPCVSCPCPLA-V 1921
Query: 261 KCNGHASRCIKSPQGALVCECRHNTAGKDCEKCKPFFSDRP 301
N A C+ G C CR AG CE+C P F P
Sbjct: 1922 PSNNFADGCVLR-NGRTQCLCRPGYAGASCERCAPGFFGNP 1961
Score = 164 (62.8 bits), Expect = 7.9e-17, Sum P(2) = 7.9e-17
Identities = 30/61 (49%), Positives = 37/61 (60%)
Query: 257 GGRCKCNGHASRC-IKSPQGA--LVCECRHNTAGKDCEKCKPFFSDRPWGRATVYDANEC 313
GGRC C+GHA C K P L C C+HNT G C++C P F+ +PW AT ANEC
Sbjct: 302 GGRCVCHGHADVCDAKDPLDPFRLQCACQHNTCGGSCDRCCPGFNQQPWKPATTDSANEC 361
Query: 314 K 314
+
Sbjct: 362 Q 362
Score = 136 (52.9 bits), Expect = 1.3e-13, Sum P(2) = 1.3e-13
Identities = 33/98 (33%), Positives = 48/98 (48%)
Query: 208 ASRCIKSPQGELV--CECRHNTAGKDCEKCKP-FFSDRPWGRATVYDANECKGGRCKCNG 264
AS + P V C C N G C++C P ++ D G ++ C C+C+G
Sbjct: 1817 ASEAGRGPPASNVELCMCPANYRGDSCQECAPGYYRDTK-G---LF-LGRCVP--CQCHG 1869
Query: 265 HASRCIKSPQGALVCECRHNTAGKDCEKCKP-FFSDRP 301
H+ RC+ P + C+HNT G CE+C+P F S P
Sbjct: 1870 HSDRCL--PGSGICVGCQHNTEGDQCERCRPGFVSSDP 1905
Score = 132 (51.5 bits), Expect = 1.5e-28, Sum P(2) = 1.5e-28
Identities = 45/178 (25%), Positives = 75/178 (42%)
Query: 39 PDFVNAAFGQEVKVNSVCGLESPER---------YCDTSGACHVCDAGSPRGRFPAEYL- 88
P + N A G + ++ CG E+P R YC G G P +Y
Sbjct: 52 PPYFNLAEGARITASATCGEEAPTRSVSRPTEDLYCKLVGG--PVAGGDPNQTIQGQYCD 109
Query: 89 --TDLNN----PSNVTCWRSEA--QTSVNSLSASPDNVTLTLSLGKKFELTYISLSFCPK 140
T N+ P + +E Q+ S + V +TL LG+ F + Y+ + F
Sbjct: 110 ICTAANSNKAHPVSNAIDGTERWWQSPPLSRGLEYNEVNVTLDLGQVFHVAYVLIKFA-N 168
Query: 141 SIKPDSLAIYKSQDFGKSWQPLQFYSSQCKKLYGRTATGVISR-GNEQEALCTDRHKK 197
S +PD + +S DFG ++QP QF++S + R + R + + +CT + +
Sbjct: 169 SPRPDLWVLERSTDFGHTYQPWQFFASSKRDCLERFGPRTLERITQDDDVICTTEYSR 226
Score = 116 (45.9 bits), Expect = 1.7e-11, Sum P(2) = 1.7e-11
Identities = 29/101 (28%), Positives = 43/101 (42%)
Query: 198 QGGRCKCNGHASRCIKSPQGELVCECRHNTAGKDCEKCKPFFSDRPWGRATVYDANECKG 257
+ G C G A P+ + C CR + G C++CKP + WG + + C
Sbjct: 727 EAGSCHPAGLAPANPALPETQAPCMCRAHVEGPSCDRCKPGY----WG-LSASNPEGCT- 780
Query: 258 GRCKCNGHASRC-IKSPQGALVCECRHNTAGKDCEKCKPFF 297
RC C+ + + QG C C+ + GK C CK F
Sbjct: 781 -RCSCDPRGTLGGVTECQGNGQCFCKAHVCGKTCAACKDGF 820
Score = 115 (45.5 bits), Expect = 2.1e-11, Sum P(2) = 2.1e-11
Identities = 37/116 (31%), Positives = 50/116 (43%)
Query: 205 NGHASRCIKSPQGELVCECRHNTAGKDCEKCKPFFSDRPWGRATVYDANECKGGRCKCNG 264
N A C+ G C CR AG CE+C P F +G V ++ C+ C C+G
Sbjct: 1924 NNFADGCVLR-NGRTQCLCRPGYAGASCERCAPGF----FGNPLVLGSS-CQP--CDCSG 1975
Query: 265 HAS-RCIKSPQGALVCECR---HNTAGKDCEKCKP-FFSDR--PWGRATVYDANEC 313
+ I S L CR +T G CE+C P F+ + P G T D + C
Sbjct: 1976 NGDPNMIFSDCDPLTGACRGCLRHTTGPHCERCAPGFYGNALLP-GNCTRCDCSPC 2030
Score = 112 (44.5 bits), Expect = 4.3e-11, Sum P(2) = 4.3e-11
Identities = 34/116 (29%), Positives = 49/116 (42%)
Query: 202 CKCNGHASRCIKSP---------------QGELVC-ECRHNTAGKDCEKCKPFFSDRPWG 245
C C+GHA C P QG VC +C+H+T G +CE+C P F P
Sbjct: 364 CNCHGHAYDCYYDPEVDRRNASQNQDNVYQGGGVCLDCQHHTTGINCERCLPGFFRAP-- 421
Query: 246 RATVYDANECKGGRCKCNGHASRCIKSPQGALVCECRHNTAGKDCEKCKPFFSDRP 301
+ + C+ C+ + C + G C CR N G+ C C ++D P
Sbjct: 422 DQPLDSPHVCRPCDCESDFTDGTC-EDLTGR--CYCRPNFTGELCAACAEGYTDFP 474
Score = 102 (41.0 bits), Expect = 4.7e-10, Sum P(2) = 4.7e-10
Identities = 27/93 (29%), Positives = 37/93 (39%)
Query: 201 RCKCNGHASRC-IKSPQGELVCECRHNTAGKDCEKCKPFFSDRPWGRATVYDANECKGGR 259
RC C+ + + QG C C+ + GK C CK F + D C+ R
Sbjct: 781 RCSCDPRGTLGGVTECQGNGQCFCKAHVCGKTCAACKDGFFGLDYA-----DYFGCRSCR 835
Query: 260 CKCNGHASRCIKSPQGALVCECRHNTAGKDCEK 292
C G + + GA C CR NT G C +
Sbjct: 836 CDVGGALGQGCEPKTGA--CRCRPNTQGPTCSE 866
Score = 102 (41.0 bits), Expect = 4.7e-10, Sum P(2) = 4.7e-10
Identities = 27/98 (27%), Positives = 41/98 (41%)
Query: 202 CKCNGHASRCIKSPQGEL---VCECRHNTAGKDCEKCKPFFSDRPWGRATVYDANECKGG 258
C C+G + + P ++ C CR N AG+ C+ C P F P C+
Sbjct: 1533 CNCSGPGVQELTDPTCDMDSGQCRCRPNVAGRRCDTCAPGFYGYP----------SCRP- 1581
Query: 259 RCKCNGHASRCIKSPQGALV--CECRHNTAGKDCEKCK 294
C C H + + S L C C+ N G C++C+
Sbjct: 1582 -CDC--HEAGTMASVCDPLTGQCHCKENVQGSRCDQCR 1616
Score = 102 (41.0 bits), Expect = 4.7e-10, Sum P(2) = 4.7e-10
Identities = 28/102 (27%), Positives = 38/102 (37%)
Query: 202 CKCNGHASRCIKSPQGELVCECRHNTAGKDCEKCKPFFSDRPWGRATVYDANECKGGRCK 261
C +G G+ C CR G C+ C P G Y+ C+ G C
Sbjct: 685 CSADGSLHTTCDPTTGQ--CRCRPRVTGLHCDMCVP-------G---AYNFPYCEAGSCH 732
Query: 262 CNGHASRCIKSPQGALVCECRHNTAGKDCEKCKPFFSDRPWG 303
G A P+ C CR + G C++CKP + WG
Sbjct: 733 PAGLAPANPALPETQAPCMCRAHVEGPSCDRCKPGY----WG 770
Score = 93 (37.8 bits), Expect = 4.0e-09, Sum P(2) = 4.0e-09
Identities = 29/112 (25%), Positives = 43/112 (38%)
Query: 200 GRCKCNGHASRCIKSPQGELVCE-------CRHNTAGKDCEKCKPFFSDRPWGRATVYDA 252
G G+ +RC SP G C+ C+ G+ C++C + +
Sbjct: 2014 GNALLPGNCTRCDCSPCGTETCDPQSGRCLCKAGVTGQRCDRCLEGY----------FGF 2063
Query: 253 NECKGGR-CKCNGHASRCIKSPQGALVCECRHNTAGKDCEKCKPFFSDRPWG 303
+C+G R C C A PQ C C+ T G C +C P + WG
Sbjct: 2064 EQCQGCRPCACGPAAKGSECHPQSGQ-CHCQPGTTGPQCLECAPGY----WG 2110
Score = 92 (37.4 bits), Expect = 5.0e-09, Sum P(2) = 5.0e-09
Identities = 36/128 (28%), Positives = 47/128 (36%)
Query: 199 GGRCKCNGHA-----SRCIKSPQG---------------ELV--CECRHNTAGKDCEKCK 236
GG+C C GH SRC G EL C C T DC C+
Sbjct: 1459 GGQCPCRGHVIGRDCSRCATGYWGFPNCRPCDCGARLCDELTGQCICPPRTVPPDCLVCQ 1518
Query: 237 PFFSDRPWGRATVYDANECKGGRCKCNGHASRCIKSPQGAL---VCECRHNTAGKDCEKC 293
P + +G + EC C+G + + P + C CR N AG+ C+ C
Sbjct: 1519 P----QSFGCHPLVGCEECN-----CSGPGVQELTDPTCDMDSGQCRCRPNVAGRRCDTC 1569
Query: 294 KPFFSDRP 301
P F P
Sbjct: 1570 APGFYGYP 1577
Score = 86 (35.3 bits), Expect = 2.1e-08, Sum P(2) = 2.1e-08
Identities = 31/99 (31%), Positives = 40/99 (40%)
Query: 198 QGGR-CKCNGHASRCIKSPQ-GELVCECRHNTAGKDCEKCKPFFSDRPWGRATVYDANEC 255
QG R C C A PQ G+ C C+ T G C +C P + WG C
Sbjct: 2067 QGCRPCACGPAAKGSECHPQSGQ--CHCQPGTTGPQCLECAPGY----WG----LPEKGC 2116
Query: 256 KGGRCKC-NGHASRCIKSPQGALVCECRHNTAGKDCEKC 293
+ RC+C GH C P C C +G+ C+ C
Sbjct: 2117 R--RCQCPRGH---C--DPHTGH-CTCPPGLSGERCDTC 2147
Score = 84 (34.6 bits), Expect = 3.4e-08, Sum P(2) = 3.4e-08
Identities = 26/89 (29%), Positives = 37/89 (41%)
Query: 221 CECRHNTAGKDCEKCKPFFSDRPWGRATV-YDANECK-----GGR---CKCNGHASR--- 268
C CR N G+ C C ++D P + N+ + G+ C CN ++
Sbjct: 452 CYCRPNFTGELCAACAEGYTDFPHCYPLPSFPHNDTREQVLPAGQIVNCDCNAAGTQGNA 511
Query: 269 CIKSPQGALVCECRHNTAGKDCEKCKPFF 297
C K P+ C C+ N G CE C P F
Sbjct: 512 CRKDPRLGR-CVCKPNFRGAHCELCAPGF 539
Score = 81 (33.6 bits), Expect = 6.8e-08, Sum P(2) = 6.8e-08
Identities = 28/96 (29%), Positives = 35/96 (36%)
Query: 202 CKCNGHASR---CIKSPQ-GELVCECRHNTAGKDCEKCKPFFSDRPWGRATVYDANECKG 257
C CN ++ C K P+ G C C+ N G CE C P F P C
Sbjct: 500 CDCNAAGTQGNACRKDPRLGR--CVCKPNFRGAHCELCAPGFHG-P----------SCHP 546
Query: 258 GRCKCNGHASRCIKSPQGALVCECRHNTAGKDCEKC 293
+C G A+ G C CR G C+ C
Sbjct: 547 CQCSSPGVANSLCDPESGQ--CMCRTGFEGDRCDHC 580
Score = 69 (29.3 bits), Expect = 1.2e-06, Sum P(2) = 1.2e-06
Identities = 22/72 (30%), Positives = 32/72 (44%)
Query: 202 CK-CNGHASRCIKSPQGELV--CECRHNTAGKDCEKCKPFFSDRPWGRATVYDANECKG- 257
C+ C+ H + + S L C C+ N G C++C+ G ++ DA KG
Sbjct: 1579 CRPCDCHEAGTMASVCDPLTGQCHCKENVQGSRCDQCRV-------GTFSL-DAANPKGC 1630
Query: 258 GRCKCNGHASRC 269
RC C G RC
Sbjct: 1631 TRCFCFGATERC 1642
Score = 37 (18.1 bits), Expect = 2.4e-07, Sum P(2) = 2.4e-07
Identities = 9/23 (39%), Positives = 11/23 (47%)
Query: 53 NSVCGLESPERYCDTSGACHVCD 75
NS+C ES + C T CD
Sbjct: 556 NSLCDPESGQCMCRTGFEGDRCD 578
>UNIPROTKB|F1P486 [details] [associations]
symbol:LOC416036 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0005576 "extracellular region" evidence=IEA]
InterPro:IPR001134 PROSITE:PS50189 GO:GO:0005576 InterPro:IPR002049
InterPro:IPR008993 Pfam:PF00053 SMART:SM00180 SUPFAM:SSF50242
PROSITE:PS01248 PROSITE:PS50027 InterPro:IPR018933 Pfam:PF01759
SMART:SM00643 InterPro:IPR008211 Pfam:PF00055 SMART:SM00136
PROSITE:PS51117 GeneTree:ENSGT00700000104042 EMBL:AADN02014130
EMBL:AADN02014129 IPI:IPI00581824 Ensembl:ENSGALT00000010226
OMA:NCTATFG ArrayExpress:F1P486 Uniprot:F1P486
Length = 613
Score = 227 (85.0 bits), Expect = 1.9e-28, Sum P(2) = 1.9e-28
Identities = 54/141 (38%), Positives = 69/141 (48%)
Query: 200 GRCKCNGHASRCIKS----P---QGEL-----VCECRHNTAGKDCEKCKPFFSDRPW--G 245
G C CNGHA C + P Q L C CRHNTAG CEKC P ++D+PW G
Sbjct: 238 GSCFCNGHAEECELANRTVPAKAQSRLHKVHGKCVCRHNTAGDHCEKCAPLYNDQPWKPG 297
Query: 246 RATVYDANECKGGRCKCNGHASRC--------IKSPQGALVCE-CRHNTAGKDCEKCKP- 295
NECK +C+C+ HA C + VC+ C+HNT G C++CKP
Sbjct: 298 DGKTGAPNECK--KCRCHNHADSCHFDLSVWLASGKRSGGVCDNCKHNTEGHRCQRCKPG 355
Query: 296 FFSDR--PWGRATVYDANECK 314
++ DR P A V C+
Sbjct: 356 YYRDRGKPMSSAEVCKPCSCQ 376
Score = 138 (53.6 bits), Expect = 1.9e-28, Sum P(2) = 1.9e-28
Identities = 54/178 (30%), Positives = 82/178 (46%)
Query: 35 RRCIPDFVNAAFGQEVKVNSVCGLESPERYC---DTS-------GA----CHVCDAGSP- 79
R C P N A G+ + CG S E YC D S G C C+A P
Sbjct: 5 RSCNPPVGNLATGRTPITLTTCGQNSTELYCSYPDQSLLHPASHGCGQPRCTKCNANQPD 64
Query: 80 RGRFPAEYLTDL-NNPSNVTCWRSEAQTSVNSLSASPDNVTLTLSLGKKFELTYISLSFC 138
PA+ D NP V+ W+S AQ V+ + L +F LT++ F
Sbjct: 65 NSHLPADMTDDFFANP--VSWWQS-AQ-GVH-------REEIRLDFETEFYLTHVIAVF- 112
Query: 139 PKSIKPDSLAIYKSQDFGKSWQPLQFYSSQCKKLYGRTAT-GVISRGNEQEALCTDRH 195
KS +P ++ + +SQD+G++W+P +++S C TAT G+ E+ ++CT R+
Sbjct: 113 -KSPRPAAMVLERSQDYGQTWRPYKYFSVNC------TATFGLQDDLTEEGSMCTSRY 163
Score = 133 (51.9 bits), Expect = 9.5e-16, Sum P(2) = 9.5e-16
Identities = 34/107 (31%), Positives = 53/107 (49%)
Query: 201 RCKCNGHASRC-----IKSPQGEL---VCE-CRHNTAGKDCEKCKP-FFSDRPWGRATVY 250
+C+C+ HA C + G+ VC+ C+HNT G C++CKP ++ DR G+ +
Sbjct: 309 KCRCHNHADSCHFDLSVWLASGKRSGGVCDNCKHNTEGHRCQRCKPGYYRDR--GKP-MS 365
Query: 251 DANECKGGRCKCNGHA----SRCIKSPQGALVCECRHNTAGKDCEKC 293
A CK C+ G A SR + C C+ AG +C++C
Sbjct: 366 SAEVCKPCSCQPMGSANATFSRSWRCHPKTGFCYCKPGVAGPNCDRC 412
>UNIPROTKB|F1NJ23 [details] [associations]
symbol:LAMB1 "Laminin subunit beta-1" species:9031 "Gallus
gallus" [GO:0005178 "integrin binding" evidence=IEA] [GO:0005201
"extracellular matrix structural constituent" evidence=IEA]
[GO:0005606 "laminin-1 complex" evidence=IEA] [GO:0005615
"extracellular space" evidence=IEA] [GO:0007162 "negative
regulation of cell adhesion" evidence=IEA] [GO:0007566 "embryo
implantation" evidence=IEA] [GO:0016477 "cell migration"
evidence=IEA] [GO:0019899 "enzyme binding" evidence=IEA]
[GO:0030335 "positive regulation of cell migration" evidence=IEA]
[GO:0031175 "neuron projection development" evidence=IEA]
[GO:0034446 "substrate adhesion-dependent cell spreading"
evidence=IEA] [GO:0042476 "odontogenesis" evidence=IEA] [GO:0043208
"glycosphingolipid binding" evidence=IEA] [GO:0043259 "laminin-10
complex" evidence=IEA] [GO:0048471 "perinuclear region of
cytoplasm" evidence=IEA] GO:GO:0048471 GO:GO:0005615 GO:GO:0016477
GO:GO:0007162 GO:GO:0030335 InterPro:IPR002049 Pfam:PF00053
SMART:SM00180 PROSITE:PS01248 PROSITE:PS50027 GO:GO:0005201
GO:GO:0043208 InterPro:IPR008211 Pfam:PF00055 SMART:SM00136
PROSITE:PS51117 GO:GO:0005606 GO:GO:0043259
GeneTree:ENSGT00620000087753 InterPro:IPR013015 PROSITE:PS51116
OMA:NTWQLAS EMBL:AADN02036854 EMBL:AADN02036852 EMBL:AADN02036853
IPI:IPI00586930 Ensembl:ENSGALT00000012832 ArrayExpress:F1NJ23
Uniprot:F1NJ23
Length = 1782
Score = 240 (89.5 bits), Expect = 2.0e-28, Sum P(2) = 2.0e-28
Identities = 50/119 (42%), Positives = 68/119 (57%)
Query: 200 GRCKCNGHASRCIK----SPQGE-LV---CECRHNTAGKDCEKCKPFFSDRPWGRATVYD 251
G C C GHAS C S + E +V C CRHNT G +CE+C F+ D PW A +
Sbjct: 260 GNCFCYGHASECAPVEGFSEEVEGMVHGHCMCRHNTKGLNCEQCLDFYHDLPWRPAEGRN 319
Query: 252 ANECKGGRCKCNGHASRC-----IKSPQGAL---VCE-CRHNTAGKDCEKCKPFFSDRP 301
+N CK +C CNGH+++C + G VC+ C+HNT G++CE+CKPF+ P
Sbjct: 320 SNACK--KCNCNGHSTQCHFDMAVYMATGNTSGGVCDDCQHNTVGRNCEQCKPFYFQHP 376
Score = 135 (52.6 bits), Expect = 3.1e-13, Sum P(2) = 3.1e-13
Identities = 35/103 (33%), Positives = 46/103 (44%)
Query: 202 CKCNGHASRCIKSPQ-GELVCECRHNTAGKDCEKCKP-FFSDRPWGRATVYDANECKGGR 259
C CNGHA C SP GE + CR +TAG +CE+C+ ++ D G C G
Sbjct: 859 CHCNGHADDC--SPYTGECL-HCRDHTAGPNCERCEAGYYGDPILGSGDHCRPCPCPDGP 915
Query: 260 CKCNGHASRCIKSPQGA-LVCECRHNTAGKDCEKCKPFFSDRP 301
AS C + P +VC C G C++C F P
Sbjct: 916 ESGRQFASGCYQDPVTLQVVCVCSTGYIGSRCDECASGFFGSP 958
Score = 133 (51.9 bits), Expect = 5.1e-13, Sum P(2) = 5.1e-13
Identities = 27/65 (41%), Positives = 35/65 (53%)
Query: 258 GRCKCNGHASRCI------KSPQGALV--CECRHNTAGKDCEKCKPFFSDRPWGRATVYD 309
G C C GHAS C + +G + C CRHNT G +CE+C F+ D PW A +
Sbjct: 260 GNCFCYGHASECAPVEGFSEEVEGMVHGHCMCRHNTKGLNCEQCLDFYHDLPWRPAEGRN 319
Query: 310 ANECK 314
+N CK
Sbjct: 320 SNACK 324
Score = 127 (49.8 bits), Expect = 2.4e-12, Sum P(2) = 2.4e-12
Identities = 32/101 (31%), Positives = 48/101 (47%)
Query: 202 CKCN--GHASRCIKSPQGELVCECRHNTAGKDCEKCKPFFSDRPWGRATVYDANECKGGR 259
C+C+ G + + G+ C C G+ C++C P F WG + C+
Sbjct: 813 CECHLRGSYNSFCDAETGQ--CHCFPGVYGRQCDRCLPGF----WGFPS------CQP-- 858
Query: 260 CKCNGHASRCIKSPQGALVCECRHNTAGKDCEKCKP-FFSD 299
C CNGHA C SP CR +TAG +CE+C+ ++ D
Sbjct: 859 CHCNGHADDC--SPYTGECLHCRDHTAGPNCERCEAGYYGD 897
Score = 123 (48.4 bits), Expect = 2.0e-28, Sum P(2) = 2.0e-28
Identities = 40/184 (21%), Positives = 77/184 (41%)
Query: 20 KIDLNSDPCYENGRPR-RCIPDFVNAAFGQEVKVN--SVCGLESPERYCDTSGA-----C 71
++ + +P Y G C P + G+ +++ S CGL PE YC S C
Sbjct: 9 RVAVAQEPEYSYGCAEGSCYPATGDLLIGRAARLSASSTCGLRQPEPYCIVSHLQEDKKC 68
Query: 72 HVCDAGSPRGRFPAEYLTDLNNPSNVTCWRSEAQTSVNSLSASPDNVTLTLSLGKKFELT 131
+CD+ P F D + NV + A + S + + +
Sbjct: 69 FICDSEDP---FHDTLNPDSHRIENVVT--TFAPNRLKLWWQSENAFQIIHVFCNRLGSI 123
Query: 132 YISLSFCPKSIKPDSLAIYKSQDFGKSWQPLQFYSSQCKKLYGRTATGVISRGNEQEALC 191
+ K+ +P ++ I +S DFGK+WQ ++++ C+ + +TG + + ++ +C
Sbjct: 124 HTEKFLAHKTFRPAAMLIERSSDFGKTWQVYRYFAYDCESSFPGISTGPMKKVDD--IIC 181
Query: 192 TDRH 195
R+
Sbjct: 182 DSRY 185
Score = 105 (42.0 bits), Expect = 5.0e-10, Sum P(2) = 5.0e-10
Identities = 29/104 (27%), Positives = 41/104 (39%)
Query: 202 CKCNGHAS-RCIKSPQGELVCECRHNTAGKDCEKCKP-FFSDRPWGRATVYDANECKGGR 259
C+C+ S + P G C+CR N G+ C +C P F P G C+
Sbjct: 765 CQCDPQGSLSSVCDPSGGQ-CQCRPNVVGRQCNRCAPGTFGFGPSG---------CRPCE 814
Query: 260 CKCNGHASRCIKSPQGALVCECRHNTAGKDCEKCKPFFSDRPWG 303
C G + + G C C G+ C++C P F WG
Sbjct: 815 CHLRGSYNSFCDAETGQ--CHCFPGVYGRQCDRCLPGF----WG 852
Score = 101 (40.6 bits), Expect = 1.3e-09, Sum P(2) = 1.3e-09
Identities = 35/136 (25%), Positives = 54/136 (39%)
Query: 168 QCKKLYG--RTATGVISRGNEQEALCTDRHKKQGGRCK-CNGHASRCIKSPQGELV--CE 222
+C+ G R GV+ + ++ A T R G C+ C+ +R I E C
Sbjct: 1039 RCEAATGQCRCLPGVVGQTCDRCAPNTWR-LASGTGCEPCDCDTARSIGLACNEFTGQCH 1097
Query: 223 CRHNTAGKDCEKCKPFFSDRPWGRATVYDANECKGGRCKCNGHASRCIKSPQGALVCECR 282
C G+ C +C+ F WG +V EC+ C CN + + + C C
Sbjct: 1098 CMPGFGGRTCRECQELF----WGDPSV----ECRA--CDCNPRGIQTPQCDRATGQCICN 1147
Query: 283 HNTAGKDCEKCKPFFS 298
G C+KC +S
Sbjct: 1148 EGVEGPRCDKCSRGYS 1163
Score = 96 (38.9 bits), Expect = 4.2e-09, Sum P(2) = 4.2e-09
Identities = 27/96 (28%), Positives = 38/96 (39%)
Query: 202 CKCNGHASRCIKSP-QGELV-CECRHNTAGKDCEKCKPFFSDRPWGRATVYDANECKGGR 259
C CN + +P E C C+ GK C +C P WG + D + C+
Sbjct: 449 CACNPLGTHPGGNPCDSETGNCYCKRLVTGKQCNQCLP----EHWGLSN--DMDGCRPCD 502
Query: 260 CKCNGHASRCIKSPQGALVCECRHNTAGKDCEKCKP 295
C G S G CECR + G+ C + +P
Sbjct: 503 CDQGGALHNNCSSESGQ--CECRPHMFGRQCNQVEP 536
Score = 84 (34.6 bits), Expect = 7.3e-08, Sum P(2) = 7.3e-08
Identities = 31/112 (27%), Positives = 48/112 (42%)
Query: 208 ASRCIKSPQG-ELVCECRHNTAGKDCEKCKPFFSDRPWGRATVYDANECKGGRCKCNGHA 266
AS C + P ++VC C G C++C F P V A C+ C+CN +
Sbjct: 922 ASGCYQDPVTLQVVCVCSTGYIGSRCDECASGFFGSP---DEVGGA--CQP--CQCNNNI 974
Query: 267 SR-----CIKSPQGALVCECRHNTAGKDCEKCKPFFSDRPWGRATVYDANEC 313
C K G V +C ++T G++C C+ + +G A D +C
Sbjct: 975 DSTDPEACDKRT-GTCV-KCLYHTEGENCHLCRQGY----YGSALQQDCRKC 1020
Score = 82 (33.9 bits), Expect = 1.2e-07, Sum P(2) = 1.2e-07
Identities = 36/150 (24%), Positives = 57/150 (38%)
Query: 168 QCKKLYGRTATGVISRGNEQEAL-CTDRHKKQGGRCKCNGHASRCIKSPQGELVCECRHN 226
QCK Y + + + E C + GG C S + + Q C C+
Sbjct: 367 QCKPFYFQHPERDLRDPDVCEPCNCDPAGSQNGGVCDRYTDFSTGLIAGQ----CRCKLF 422
Query: 227 TAGKDCEKCKPFFSDRPWGRATVYDANECKGGRCKCNGHASRCIKSPQGALV--CECRHN 284
G+ C+ CK F +G + D + C+ C CN + +P + C C+
Sbjct: 423 VEGERCDLCKEGF----YG-LSADDPSGCQS--CACNPLGTHPGGNPCDSETGNCYCKRL 475
Query: 285 TAGKDCEKCKPFFSDRPWGRATVYDANECK 314
GK C +C P WG + D + C+
Sbjct: 476 VTGKQCNQCLP----EHWGLSN--DMDGCR 499
Score = 80 (33.2 bits), Expect = 1.9e-07, Sum P(2) = 1.9e-07
Identities = 25/104 (24%), Positives = 41/104 (39%)
Query: 210 RCIKSPQGELVCECRHNTAGKDCEKCKPFFSDRPWGRATVYDANECKGGRCKCNGHASRC 269
RC ++ G+ C C G+ C++C P W A+ C+ C C+ S
Sbjct: 1039 RC-EAATGQ--CRCLPGVVGQTCDRCAP----NTWRLAS---GTGCEP--CDCDTARSIG 1086
Query: 270 IKSPQGALVCECRHNTAGKDCEKCKPFFSDRPWGRATVYDANEC 313
+ + C C G+ C +C+ F WG +V + C
Sbjct: 1087 LACNEFTGQCHCMPGFGGRTCRECQELF----WGDPSV-ECRAC 1125
Score = 77 (32.2 bits), Expect = 3.8e-07, Sum P(2) = 3.8e-07
Identities = 28/99 (28%), Positives = 36/99 (36%)
Query: 203 KCNGHASRCIKSPQGELVCECRHNTAG----KDCEKCKPFFSDRPWGRATVYDANECKGG 258
K G +C+ +GE CR G +DC KC + R DA C
Sbjct: 984 KRTGTCVKCLYHTEGENCHLCRQGYYGSALQQDCRKCVCNYLGTV--REDCDDAENC--- 1038
Query: 259 RCKCNGHASRCIKSPQGALVCECRHNT----AGKDCEKC 293
RC+ RC+ G C NT +G CE C
Sbjct: 1039 RCEAATGQCRCLPGVVGQTCDRCAPNTWRLASGTGCEPC 1077
>UNIPROTKB|F1SPT5 [details] [associations]
symbol:LAMB2 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0072274 "metanephric glomerular basement membrane
development" evidence=IEA] [GO:0072249 "metanephric glomerular
visceral epithelial cell development" evidence=IEA] [GO:0060041
"retina development in camera-type eye" evidence=IEA] [GO:0048677
"axon extension involved in regeneration" evidence=IEA] [GO:0045202
"synapse" evidence=IEA] [GO:0014044 "Schwann cell development"
evidence=IEA] [GO:0014002 "astrocyte development" evidence=IEA]
[GO:0007601 "visual perception" evidence=IEA] [GO:0007528
"neuromuscular junction development" evidence=IEA] [GO:0007411
"axon guidance" evidence=IEA] [GO:0005608 "laminin-3 complex"
evidence=IEA] [GO:0005178 "integrin binding" evidence=IEA]
GO:GO:0007411 GO:GO:0007528 GO:GO:0007601 GO:GO:0060041
InterPro:IPR002049 Pfam:PF00053 SMART:SM00180 PROSITE:PS01248
PROSITE:PS50027 GO:GO:0014044 GO:GO:0014002 InterPro:IPR008211
Pfam:PF00055 SMART:SM00136 PROSITE:PS51117 GO:GO:0005608
GeneTree:ENSGT00620000087753 InterPro:IPR013015 PROSITE:PS51116
OMA:QPYCIVS GO:GO:0048677 GO:GO:0072274 GO:GO:0072249 EMBL:CU856115
Ensembl:ENSSSCT00000012455 ArrayExpress:F1SPT5 Uniprot:F1SPT5
Length = 1642
Score = 234 (87.4 bits), Expect = 2.1e-28, Sum P(2) = 2.1e-28
Identities = 49/119 (41%), Positives = 68/119 (57%)
Query: 200 GRCKCNGHASRCIKSP------QGEL--VCECRHNTAGKDCEKCKPFFSDRPWGRATVYD 251
G C C GHAS+C +P +G + C C+HNT G +CE+C+ F+ D PW A
Sbjct: 283 GNCFCYGHASQCAPAPGAPAHAEGMVHGACICKHNTRGLNCEQCQDFYHDLPWHPAEDGH 342
Query: 252 ANECKGGRCKCNGHASRC-----IKSPQGAL---VCE-CRHNTAGKDCEKCKPFFSDRP 301
++ CK +C+C+GHA C I G + VC+ C+HNTAG+ CE C+PFF P
Sbjct: 343 SHACK--KCECHGHAHSCHFDMAIYLASGNVSGGVCDGCQHNTAGRHCELCRPFFYRDP 399
Score = 154 (59.3 bits), Expect = 5.2e-16, Sum P(2) = 5.2e-16
Identities = 40/121 (33%), Positives = 55/121 (45%)
Query: 193 DRHKKQGGRCKCNGHASRC-----IKSPQGEL---VCE-CRHNTAGKDCEKCKPFFSDRP 243
D H +C+C+GHA C I G + VC+ C+HNTAG+ CE C+PFF P
Sbjct: 340 DGHSHACKKCECHGHAHSCHFDMAIYLASGNVSGGVCDGCQHNTAGRHCELCRPFFYRDP 399
Query: 244 WGRATVYDANECKGGRCKCNGH--ASRCIK--SPQGALV---CECRHNTAGKDCEKCKPF 296
+ D C+ C G RC P LV C C+ + G C++C+
Sbjct: 400 --TKDLRDPGVCRSCDCDPMGSQDGGRCDPHDDPALGLVSGQCRCKEHVVGSRCQQCRDG 457
Query: 297 F 297
F
Sbjct: 458 F 458
Score = 136 (52.9 bits), Expect = 5.9e-14, Sum P(2) = 5.9e-14
Identities = 26/65 (40%), Positives = 37/65 (56%)
Query: 258 GRCKCNGHASRCIKSP------QGAL--VCECRHNTAGKDCEKCKPFFSDRPWGRATVYD 309
G C C GHAS+C +P +G + C C+HNT G +CE+C+ F+ D PW A
Sbjct: 283 GNCFCYGHASQCAPAPGAPAHAEGMVHGACICKHNTRGLNCEQCQDFYHDLPWHPAEDGH 342
Query: 310 ANECK 314
++ CK
Sbjct: 343 SHACK 347
Score = 128 (50.1 bits), Expect = 2.1e-28, Sum P(2) = 2.1e-28
Identities = 33/123 (26%), Positives = 60/123 (48%)
Query: 53 NSVCGLESPERYCDTSGA-----CHVCDAGSPRGRFPAEYLTDLNNPSNV-TCWRSEAQT 106
+S CGL P+ YC S C +CD+ P F A + + NV T + + +
Sbjct: 67 SSTCGLHGPQPYCIVSHLQDEKKCFLCDSRRP---FSARDNPNSHRIQNVVTSFAPQRRA 123
Query: 107 SVNSLSASPDNVTLTLSLGKKFELTYISLSFCPKSIKPDSLAIYKSQDFGKSWQPLQFYS 166
+ VT+ L L +F T++ ++F K+ +P ++ + +S DFG++W +++S
Sbjct: 124 AWWQSENGVPVVTIQLDLEAEFHFTHLIMTF--KTFRPAAMLVERSADFGRTWHVYRYFS 181
Query: 167 SQC 169
C
Sbjct: 182 YDC 184
Score = 110 (43.8 bits), Expect = 3.5e-11, Sum P(2) = 3.5e-11
Identities = 31/102 (30%), Positives = 46/102 (45%)
Query: 202 CKCN--GHASRCIKSPQGELVCECRHNTAGKDCEKCKPFFSDRPWGRATVYDANECKGGR 259
C+C+ G S ++ G+ C CR G C++C+ WG + C+
Sbjct: 833 CQCSPEGALSGLCEATSGQ--CPCRTGAFGLRCDRCQR----GQWGFPS------CRP-- 878
Query: 260 CKCNGHASRCIKSPQGALVCECRHNTAGKDCEKCKPFFSDRP 301
C CNGHA C + G + CR +T G+ CE+C F P
Sbjct: 879 CVCNGHADEC-DTHTGTCL-GCRDHTGGEHCERCIAGFHGDP 918
Score = 109 (43.4 bits), Expect = 4.4e-11, Sum P(2) = 4.4e-11
Identities = 31/100 (31%), Positives = 42/100 (42%)
Query: 218 ELVCECRHNTAGKDCEKCKP-FFSD--RPWGRATVYDA-NECKGGRCKCNGHASRCIKSP 273
++VC CR G CE C P F D RP GR + N C+ H+ +C++
Sbjct: 953 QIVCHCRAGYTGLRCEACAPGHFGDPSRPGGRCQPCECGNIDPTDPDACDPHSGQCLR-- 1010
Query: 274 QGALVCECRHNTAGKDCEKCKPFFSDRPWGRATVYDANEC 313
C H+T G C CKP F G+A + C
Sbjct: 1011 -------CLHHTEGPHCAHCKPGFH----GQAARQSCHRC 1039
Score = 104 (41.7 bits), Expect = 1.5e-10, Sum P(2) = 1.5e-10
Identities = 27/107 (25%), Positives = 48/107 (44%)
Query: 191 CTDRHKKQGGRCKCNGHASRCIKSPQGELVCECRHNTAGKDCEKCKPFFSDRPWGRATVY 250
C + GGRC + H + G+ C C+ + G C++C+ F +G +
Sbjct: 414 CDPMGSQDGGRC--DPHDDPALGLVSGQ--CRCKEHVVGSRCQQCRDGF----FG-LSAS 464
Query: 251 DANECKGGRCKCNGHASRCIKSP--QGALVCECRHNTAGKDCEKCKP 295
DA C+ RC+C+ + +P + + C C+ G+ C +C P
Sbjct: 465 DALGCQ--RCQCDTRGTVPGGTPCDRNSGACFCKRLVTGRGCNRCLP 509
Score = 98 (39.6 bits), Expect = 6.1e-10, Sum P(2) = 6.1e-10
Identities = 28/116 (24%), Positives = 48/116 (41%)
Query: 201 RCKCNGHASRCIKSP--QGELVCECRHNTAGKDCEKCKPFFSDRPWGRATVYDANECKGG 258
RC+C+ + +P + C C+ G+ C +C P WG + +D C+
Sbjct: 471 RCQCDTRGTVPGGTPCDRNSGACFCKRLVTGRGCNRCLPGH----WGLS--HDLLGCRPC 524
Query: 259 RCKCNGHASRCIKSPQGALVCECRHNTAGKDCEKCKPFFSDRPWGRATVYDANECK 314
C G G C CR + G+ CE+ +P + RP+ ++A E +
Sbjct: 525 DCDIGGALDPQCNEATGQ--CRCRQHMVGRCCEQVQPGYF-RPFLDHLTWEAEEAR 577
Score = 90 (36.7 bits), Expect = 4.0e-09, Sum P(2) = 4.0e-09
Identities = 27/104 (25%), Positives = 45/104 (43%)
Query: 204 CNGHASRCIKSPQGELVCECRHNTAGKDCEKCKPFFSDRPWGRATVY---------DANE 254
C+ H+ +C++ C H+T G C CKP F + R + + D +
Sbjct: 1001 CDPHSGQCLR---------CLHHTEGPHCAHCKPGFHGQA-ARQSCHRCNCNLLGTDPQQ 1050
Query: 255 CKG-GRCKCNGHASRCIKSPQGALVCE-CRHN---TAGKDCEKC 293
C RC C+ + +C Q L C+ C + T+G+ C+ C
Sbjct: 1051 CPSPDRCNCDQSSGQCPCLSQRDLSCDRCAPSWNLTSGRGCQPC 1094
Score = 88 (36.0 bits), Expect = 6.5e-09, Sum P(2) = 6.5e-09
Identities = 31/113 (27%), Positives = 43/113 (38%)
Query: 191 CTDRHKKQGGR-CK-CNGHASRCIKSPQGELV--CECRHNTAGKDCEKCKPFFSDRPWGR 246
C GR C+ C H SR E C CR G+ C +C+ WG
Sbjct: 1079 CAPSWNLTSGRGCQPCACHPSRSRGPTCNEFTGQCHCRTGFGGRTCSECQELH----WGD 1134
Query: 247 ATVYDANECKGGRCKCNG-HASRCIKSPQGALVCECRHNTAGKDCEKCKPFFS 298
+ +C+ C G +C +S G C CR +G C++C FS
Sbjct: 1135 PGL----QCRACDCDPRGIDTPQCHRST-GH--CSCRPGVSGVRCDQCARGFS 1180
Score = 83 (34.3 bits), Expect = 2.1e-08, Sum P(2) = 2.1e-08
Identities = 28/94 (29%), Positives = 36/94 (38%)
Query: 205 NGHASRCIKSPQGELVCECRHNTAGKDCEKCKPFFSDRPWGRATV----YDANECKGGRC 260
NG A C PQG L EC N G C CKP R + C+ +C
Sbjct: 780 NG-ALPCQCDPQGSLSSEC--NPHGGQC-LCKPAVVGRRCNICAPGYYGFGPTGCQACQC 835
Query: 261 KCNGHASRCIKSPQGALVCECRHNTAGKDCEKCK 294
G S ++ G C CR G C++C+
Sbjct: 836 SPEGALSGLCEATSGQ--CPCRTGAFGLRCDRCQ 867
Score = 69 (29.3 bits), Expect = 5.8e-07, Sum P(2) = 5.8e-07
Identities = 21/94 (22%), Positives = 34/94 (36%)
Query: 201 RCKCNGHASRCIKSPQGELVCECRHNTAGKDCEKCKPFFSDRPWGRATVYDANECKGGRC 260
RC CN + + P + C C ++ C + DR + C+ C
Sbjct: 1038 RCNCNLLGTDPQQCPSPDR-CNCDQSSGQCPCLSQRDLSCDRCAPSWNLTSGRGCQP--C 1094
Query: 261 KCNGHASRCIKSPQGALVCECRHNTAGKDCEKCK 294
C+ SR + C CR G+ C +C+
Sbjct: 1095 ACHPSRSRGPTCNEFTGQCHCRTGFGGRTCSECQ 1128
Score = 55 (24.4 bits), Expect = 1.6e-05, Sum P(2) = 1.6e-05
Identities = 13/46 (28%), Positives = 21/46 (45%)
Query: 260 CKCNGHASRCIK-SPQGALVCECRHNTAGKDCEKCKP-FFSDRPWG 303
C+C+ S + +P G C C+ G+ C C P ++ P G
Sbjct: 785 CQCDPQGSLSSECNPHGGQ-CLCKPAVVGRRCNICAPGYYGFGPTG 829
>UNIPROTKB|F1MDD5 [details] [associations]
symbol:Bt.12589 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005610 "laminin-5 complex" evidence=IEA] [GO:0045995
"regulation of embryonic development" evidence=IEA] [GO:0030334
"regulation of cell migration" evidence=IEA] [GO:0030155
"regulation of cell adhesion" evidence=IEA] [GO:0007155 "cell
adhesion" evidence=IEA] [GO:0005606 "laminin-1 complex"
evidence=IEA] [GO:0005102 "receptor binding" evidence=IEA]
InterPro:IPR009254 InterPro:IPR010307 Pfam:PF06008 Pfam:PF06009
GO:GO:0030155 GO:GO:0007155 InterPro:IPR013032 PROSITE:PS00022
Gene3D:2.60.120.200 InterPro:IPR008985 InterPro:IPR013320
SUPFAM:SSF49899 GO:GO:0030334 InterPro:IPR002049 InterPro:IPR001791
Pfam:PF00053 Pfam:PF00054 SMART:SM00180 SMART:SM00282
PROSITE:PS01248 PROSITE:PS50027 PROSITE:PS50025 Pfam:PF02210
GO:GO:0045995 GeneTree:ENSGT00700000104140 InterPro:IPR018031
InterPro:IPR000034 InterPro:IPR008211 Pfam:PF00052 Pfam:PF00055
SMART:SM00281 SMART:SM00136 PROSITE:PS51115 PROSITE:PS51117
GO:GO:0005606 OMA:DSCQGCS GO:GO:0005610 EMBL:DAAA02056591
EMBL:DAAA02056592 EMBL:DAAA02056593 EMBL:DAAA02056594
EMBL:DAAA02056595 EMBL:DAAA02056596 EMBL:DAAA02056597
EMBL:DAAA02056598 EMBL:DAAA02056599 EMBL:DAAA02056600
EMBL:DAAA02056601 EMBL:DAAA02056602 IPI:IPI00686590
Ensembl:ENSBTAT00000060991 ArrayExpress:F1MDD5 Uniprot:F1MDD5
Length = 3242
Score = 236 (88.1 bits), Expect = 2.3e-28, Sum P(2) = 2.3e-28
Identities = 51/123 (41%), Positives = 69/123 (56%)
Query: 199 GGRCKCNGHASRC-IKSPQGELVCECRHNTAGKDCEKCKPFFSDRPWGRATVYDANECKG 257
GGRC CNGHA C +P+ CEC+HNT G C++C ++ R W AT +NEC+
Sbjct: 199 GGRCVCNGHAEVCNANNPEKLFRCECQHNTCGDTCDRCCMGYNQRRWRPATGKQSNECEA 258
Query: 258 GRCKCNGHASRCIKSP-----QGAL----------VC-ECRHNTAGKDCEKC-KPFFSDR 300
C C+GH++ C P Q +L VC C+HNTAG +CEKC K ++ R
Sbjct: 259 --CNCHGHSTDCYYDPDVERQQASLNIQGLYAGGGVCINCQHNTAGVNCEKCAKGYY--R 314
Query: 301 PWG 303
P+G
Sbjct: 315 PYG 317
Score = 158 (60.7 bits), Expect = 3.0e-16, Sum P(2) = 3.0e-16
Identities = 27/59 (45%), Positives = 36/59 (61%)
Query: 257 GGRCKCNGHASRC-IKSPQGALVCECRHNTAGKDCEKCKPFFSDRPWGRATVYDANECK 314
GGRC CNGHA C +P+ CEC+HNT G C++C ++ R W AT +NEC+
Sbjct: 199 GGRCVCNGHAEVCNANNPEKLFRCECQHNTCGDTCDRCCMGYNQRRWRPATGKQSNECE 257
Score = 145 (56.1 bits), Expect = 9.3e-15, Sum P(2) = 9.3e-15
Identities = 42/120 (35%), Positives = 57/120 (47%)
Query: 192 TDRHKKQGGRCKCNGHASRCIKSP-----QGEL----------VC-ECRHNTAGKDCEKC 235
T + + C C+GH++ C P Q L VC C+HNTAG +CEKC
Sbjct: 249 TGKQSNECEACNCHGHSTDCYYDPDVERQQASLNIQGLYAGGGVCINCQHNTAGVNCEKC 308
Query: 236 -KPFFSDRPWGRATVYDANECKGGRCKCNG-HASRCIKSPQGALVCECRHNTAGKDCEKC 293
K ++ RP+G V+ + C C C+ HA C QG+ C CR N G CE+C
Sbjct: 309 AKGYY--RPYG-IPVHAPDGCIP--CSCHPEHAEDC---EQGSGRCTCRPNFRGDHCEEC 360
Score = 132 (51.5 bits), Expect = 2.3e-28, Sum P(2) = 2.3e-28
Identities = 34/130 (26%), Positives = 62/130 (47%)
Query: 71 CHVCDAGSPRGRFPAEYLTDLNNPSNVTCWRSEAQTSVNSLSASPDNVTLTLSLGKKFEL 130
C C++ PR P D + W+S +S + V +TL LG+ F++
Sbjct: 5 CDYCNSEDPRKAHPVTNAID----GSERWWQSPPLSS----GMQYNKVNVTLDLGQLFQV 56
Query: 131 TYISLSFCPKSIKPDSLAIYKSQDFGKSWQPLQFYSSQ---CKKLYGRTATGVISRGNEQ 187
Y+ + F S +PD + +S DFG ++ P Q+++ C + +G+ A I+R +
Sbjct: 57 AYVLIKFA-NSPRPDLWVLERSVDFGSTYSPWQYFAHSKVDCLEQFGQEANRAITR--DD 113
Query: 188 EALCTDRHKK 197
+ LCT + +
Sbjct: 114 DVLCTTEYSR 123
Score = 119 (46.9 bits), Expect = 6.2e-12, Sum P(2) = 6.2e-12
Identities = 30/105 (28%), Positives = 48/105 (45%)
Query: 202 CKCNGHASRCIKSPQGELVC-ECRHNTA---GKDCEKCKPFFSDRPWGRATVYDANECKG 257
C CNGH++RC G +C EC G+ CE+CK W T++ + C+
Sbjct: 1591 CNCNGHSNRC---QDGSGICIECSSGMTIRGGEHCERCK---EGSYWN--TIHGS--CRV 1640
Query: 258 GRCK-CNGHASRCIKSPQGALVCECRHNTAGKDCEKCKPFFSDRP 301
C + A+ C+ + + + C C+ G CE+C P + P
Sbjct: 1641 CPCPHSDSFATGCVVTGEN-VKCSCKPGYTGTRCERCAPGYFGNP 1684
Score = 99 (39.9 bits), Expect = 7.2e-10, Sum P(2) = 7.2e-10
Identities = 25/79 (31%), Positives = 36/79 (45%)
Query: 220 VCECRHNTAGKDCEKCKPFFSDRPWGRATVYDANECKGGRCKCNGHASRCIKSPQGALVC 279
+C C + G C+ C P + G T + C C CNGH++RC G+ +C
Sbjct: 1557 MCACPPDYTGDSCQGCSPGYYRENKGLYTGW----CVP--CNCNGHSNRC---QDGSGIC 1607
Query: 280 -ECRHNTA---GKDCEKCK 294
EC G+ CE+CK
Sbjct: 1608 IECSSGMTIRGGEHCERCK 1626
Score = 91 (37.1 bits), Expect = 4.8e-09, Sum P(2) = 4.8e-09
Identities = 34/113 (30%), Positives = 45/113 (39%)
Query: 202 CKCN--GHASRCIKSPQGELVCECRHNTAGKDCEKCKPFFSDRPWGRATVYDANECKGGR 259
C CN G I QG C CR G C+ C+P F Y C+ +
Sbjct: 395 CDCNLEGVLPE-ICDAQGR--CLCRPGVGGAQCDACRPGF----------YSFPICQACQ 441
Query: 260 CKCNG-HASRCIKSPQGALVCECRHNTAGKDCEKCKPFFSDRPW--GRATVYD 309
C G + + C SP CEC+ G+ C++C SD P G + V D
Sbjct: 442 CSALGSYQTPC--SPVTGQ-CECQPGITGQRCDRCLSGASDFPHCQGSSNVCD 491
Score = 90 (36.7 bits), Expect = 6.1e-09, Sum P(2) = 6.1e-09
Identities = 23/94 (24%), Positives = 43/94 (45%)
Query: 202 CKCN--GHASRCIKSPQGELVCECRHNTAGKDCEKCKP-FFSDRPWGRATVYDANECKGG 258
C+C+ G S + Q + C C+ + G C+ C+ +F+ ++ + C+G
Sbjct: 535 CRCHVAGTMSGIGECGQLDGDCHCKSHVGGDSCDTCEDGYFALE---KSNYFG---CQGC 588
Query: 259 RCKCNGHASRCIKSPQGALVCECRHNTAGKDCEK 292
+C G + G VC+CR + GK C++
Sbjct: 589 QCDIGGAVTPVCSGRSG--VCQCREHVVGKACQR 620
Score = 90 (36.7 bits), Expect = 6.1e-09, Sum P(2) = 6.1e-09
Identities = 27/103 (26%), Positives = 40/103 (38%)
Query: 202 CKCNGHASRCIKSPQ--GEL-VCECRHNTAGKDCEKCKPFFSDRPWGRATVYDANECKGG 258
C C+ + +P+ G+ C CR G+ C++C P F Y EC
Sbjct: 1260 CNCSRTGTDGTTTPECDGDHGQCRCRPRITGRQCDRCAPGF----------YRFPECLPC 1309
Query: 259 RCKCNGHASRCIKSPQGALVCECRHNTAGKDCEKCKP--FFSD 299
C +G GA C C+ N G +C C+ F+ D
Sbjct: 1310 HCSRDGTEPGVCDPGTGA--CLCKENVQGTECNMCREGSFYLD 1350
Score = 90 (36.7 bits), Expect = 6.1e-09, Sum P(2) = 6.1e-09
Identities = 33/113 (29%), Positives = 40/113 (35%)
Query: 202 CKCNG-HASRCIKSPQGELVCECRHNTAGKDCEKCKPFFSDRP-WGRATVYDANE----- 254
C C+ HA C QG C CR N G CE+C + P R + +
Sbjct: 329 CSCHPEHAEDC---EQGSGRCTCRPNFRGDHCEECAAGYYHFPVCSRIPILPISTPSPED 385
Query: 255 ------CKGGRCKCNGHASRCIKSPQGALVCECRHNTAGKDCEKCKPFFSDRP 301
KG C G I QG C CR G C+ C+P F P
Sbjct: 386 PVAGDIIKGCDCNLEGVLPE-ICDAQGR--CLCRPGVGGAQCDACRPGFYSFP 435
Score = 85 (35.0 bits), Expect = 2.0e-08, Sum P(2) = 2.0e-08
Identities = 24/96 (25%), Positives = 38/96 (39%)
Query: 204 CNGHASRCIKSPQGELV-----CECRHNTAGKDCEKCKPFFSDRPWGRATVYDANECKGG 258
C G ++ C P G + C+C+ + C CKP + W A + + C
Sbjct: 483 CQGSSNVC--DPAGTVDSSLGHCQCKLHVESPSCSICKPLY----WNLAKE-NPDGCSEC 535
Query: 259 RCKCNGHASRCIKSPQGALVCECRHNTAGKDCEKCK 294
RC G S + Q C C+ + G C+ C+
Sbjct: 536 RCHVAGTMSGIGECGQLDGDCHCKSHVGGDSCDTCE 571
Score = 81 (33.6 bits), Expect = 5.2e-08, Sum P(2) = 5.2e-08
Identities = 24/98 (24%), Positives = 41/98 (41%)
Query: 202 CKCNGHASRCIKSPQGELV--CECRHNTAGKDCEKCKPFFSDRPWGRATVYDANECKGGR 259
C+C+ S ++P + CEC+ G+ C++C SD P C+G
Sbjct: 440 CQCSALGS--YQTPCSPVTGQCECQPGITGQRCDRCLSGASDFP----------HCQGSS 487
Query: 260 CKCNGHASRCIKSPQGALVCECRHNTAGKDCEKCKPFF 297
C+ + + S G C+C+ + C CKP +
Sbjct: 488 NVCDPAGT--VDSSLGH--CQCKLHVESPSCSICKPLY 521
Score = 73 (30.8 bits), Expect = 3.4e-07, Sum P(2) = 3.4e-07
Identities = 29/119 (24%), Positives = 45/119 (37%)
Query: 198 QGGRCKCNGHA--SRCIKSPQGEL-VCECRHNTAGKD-CEK------CKPFFSDRPWGRA 247
+GG+C C H +C + G C+ + G+ CE+ C P + RP +
Sbjct: 1185 EGGQCPCRPHVIGRQCTRCQTGFYGFPHCKPCSCGRRLCEETTGRCLCPPL-TVRP--QC 1241
Query: 248 TVYDANE--------CKGGRCKCNGHASRCIKSPQGAL-VCECRHNTAGKDCEKCKPFF 297
V + + C+G C G G C CR G+ C++C P F
Sbjct: 1242 DVCEVHSFSFHPLAGCEGCNCSRTGTDGTTTPECDGDHGQCRCRPRITGRQCDRCAPGF 1300
Score = 67 (28.6 bits), Expect = 1.4e-06, Sum P(2) = 1.4e-06
Identities = 22/86 (25%), Positives = 34/86 (39%)
Query: 218 ELVCECRHNTAGKDCEKCKPFFSDRPWGRATVYD--ANECKGGRCKCNGHASRCIKSPQG 275
E V C ++ D ++ F + +Y A C+ GH C SP+G
Sbjct: 1131 EFVTNCGGDSFYIDPQRASEFCKNSARSLVALYHEGALPCECHPAGATGHP--C--SPEG 1186
Query: 276 ALVCECRHNTAGKDCEKCKPFFSDRP 301
C CR + G+ C +C+ F P
Sbjct: 1187 GQ-CPCRPHVIGRQCTRCQTGFYGFP 1211
Score = 45 (20.9 bits), Expect = 0.00025, Sum P(2) = 0.00025
Identities = 7/22 (31%), Positives = 10/22 (45%)
Query: 274 QGALVCECRHNTAGKDCEKCKP 295
Q +C C + G C+ C P
Sbjct: 1553 QSVEMCACPPDYTGDSCQGCSP 1574
Score = 41 (19.5 bits), Expect = 2.3e-05, Sum P(2) = 2.3e-05
Identities = 8/22 (36%), Positives = 11/22 (50%)
Query: 65 CDTSGACHVCDAGSPRGRFPAE 86
C +G VC+A +P F E
Sbjct: 202 CVCNGHAEVCNANNPEKLFRCE 223
>UNIPROTKB|E2R4J1 [details] [associations]
symbol:LAMB2 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0072274 "metanephric glomerular basement
membrane development" evidence=IEA] [GO:0072249 "metanephric
glomerular visceral epithelial cell development" evidence=IEA]
[GO:0060041 "retina development in camera-type eye" evidence=IEA]
[GO:0048677 "axon extension involved in regeneration" evidence=IEA]
[GO:0045202 "synapse" evidence=IEA] [GO:0014044 "Schwann cell
development" evidence=IEA] [GO:0014002 "astrocyte development"
evidence=IEA] [GO:0007601 "visual perception" evidence=IEA]
[GO:0007528 "neuromuscular junction development" evidence=IEA]
[GO:0007411 "axon guidance" evidence=IEA] [GO:0005608 "laminin-3
complex" evidence=IEA] [GO:0005178 "integrin binding" evidence=IEA]
GO:GO:0007411 GO:GO:0007528 GO:GO:0007601 GO:GO:0060041
InterPro:IPR002049 Pfam:PF00053 SMART:SM00180 PROSITE:PS01248
PROSITE:PS50027 GO:GO:0014044 GO:GO:0014002 InterPro:IPR008211
Pfam:PF00055 SMART:SM00136 PROSITE:PS51117 GO:GO:0005608
GeneTree:ENSGT00620000087753 InterPro:IPR013015 PROSITE:PS51116
OMA:QPYCIVS GO:GO:0048677 GO:GO:0072274 GO:GO:0072249
EMBL:AAEX03012231 ProteinModelPortal:E2R4J1
Ensembl:ENSCAFT00000018765 Uniprot:E2R4J1
Length = 1803
Score = 232 (86.7 bits), Expect = 2.6e-28, Sum P(2) = 2.6e-28
Identities = 48/119 (40%), Positives = 68/119 (57%)
Query: 200 GRCKCNGHASRCIKSP------QGEL--VCECRHNTAGKDCEKCKPFFSDRPWGRATVYD 251
G C C GHAS+C +P +G + C C+HNT G +CE+C+ F+ D PW A
Sbjct: 284 GNCFCYGHASQCAPAPGAPAHAEGMVHGACVCKHNTRGLNCEQCQDFYHDLPWRPAEDGH 343
Query: 252 ANECKGGRCKCNGHASRC-----IKSPQGAL---VCE-CRHNTAGKDCEKCKPFFSDRP 301
++ C+ +C+C+GHA C I G + VC+ C+HNTAG+ CE C+PFF P
Sbjct: 344 SHACR--KCECHGHAHSCHFDMAIYLASGNVSGGVCDGCQHNTAGRHCELCRPFFYRDP 400
Score = 152 (58.6 bits), Expect = 6.6e-16, Sum P(2) = 6.6e-16
Identities = 40/121 (33%), Positives = 55/121 (45%)
Query: 193 DRHKKQGGRCKCNGHASRC-----IKSPQGEL---VCE-CRHNTAGKDCEKCKPFFSDRP 243
D H +C+C+GHA C I G + VC+ C+HNTAG+ CE C+PFF P
Sbjct: 341 DGHSHACRKCECHGHAHSCHFDMAIYLASGNVSGGVCDGCQHNTAGRHCELCRPFFYRDP 400
Query: 244 WGRATVYDANECKGGRCKCNGH--ASRCIK--SPQGALV---CECRHNTAGKDCEKCKPF 296
+ D C+ C G RC P LV C C+ + G C++C+
Sbjct: 401 --SKDLRDPAMCRSCDCDPMGSQDGGRCDPHDDPALGLVSGQCRCKEHVVGSRCQQCRDG 458
Query: 297 F 297
F
Sbjct: 459 F 459
Score = 134 (52.2 bits), Expect = 7.6e-14, Sum P(2) = 7.6e-14
Identities = 25/65 (38%), Positives = 37/65 (56%)
Query: 258 GRCKCNGHASRCIKSP------QGAL--VCECRHNTAGKDCEKCKPFFSDRPWGRATVYD 309
G C C GHAS+C +P +G + C C+HNT G +CE+C+ F+ D PW A
Sbjct: 284 GNCFCYGHASQCAPAPGAPAHAEGMVHGACVCKHNTRGLNCEQCQDFYHDLPWRPAEDGH 343
Query: 310 ANECK 314
++ C+
Sbjct: 344 SHACR 348
Score = 130 (50.8 bits), Expect = 2.6e-28, Sum P(2) = 2.6e-28
Identities = 36/141 (25%), Positives = 66/141 (46%)
Query: 37 CIPDFVNAAFGQ--EVKVNSVCGLESPERYCDTSGA-----CHVCDAGSPRGRFPAEYLT 89
C P + G+ + +S CGL P+ YC S C +CD+ P F A
Sbjct: 50 CYPATGDLLVGRADRLTASSTCGLHGPQPYCIVSHLQDEKKCFLCDSRRP---FSARDNP 106
Query: 90 DLNNPSNV-TCWRSEAQTSVNSLSASPDNVTLTLSLGKKFELTYISLSFCPKSIKPDSLA 148
+ + NV T + + + + VT+ L L +F T++ ++F K+ +P ++
Sbjct: 107 NSHRIQNVVTSFAPQRRAAWWQSENGVPVVTIQLDLEAEFHFTHLIMTF--KTFRPAAML 164
Query: 149 IYKSQDFGKSWQPLQFYSSQC 169
+ +S DFG++W +++S C
Sbjct: 165 VERSADFGRTWHVYRYFSYDC 185
Score = 115 (45.5 bits), Expect = 7.7e-12, Sum P(2) = 7.7e-12
Identities = 33/102 (32%), Positives = 46/102 (45%)
Query: 202 CKCN--GHASRCIKSPQGELVCECRHNTAGKDCEKCKPFFSDRPWGRATVYDANECKGGR 259
C+C+ G S + G+ C CR G C++C+ WG + C+
Sbjct: 834 CQCSPEGALSGLCEETSGQ--CPCRTGAFGLRCDRCQR----GQWGFPS------CQP-- 879
Query: 260 CKCNGHASRCIKSPQGALVCECRHNTAGKDCEKCKPFFSDRP 301
C CNGHA C + GA V CR +T G+ CE+C F P
Sbjct: 880 CVCNGHADEC-DTHTGACV-GCRDHTGGEHCERCIAGFHGDP 919
Score = 101 (40.6 bits), Expect = 2.2e-10, Sum P(2) = 2.2e-10
Identities = 30/102 (29%), Positives = 43/102 (42%)
Query: 218 ELVCECRHNTAGKDCEKCKP-FFSD--RPWGRATVYDANECKGGRCKCNGHASRCIKS-- 272
+++C CR G CE C P F D RP G +C+ C+CNG+
Sbjct: 954 QIMCHCRAGYTGLRCEACAPGHFGDPSRPDG--------QCQP--CECNGNIDPMDPDAC 1003
Query: 273 -PQGALVCECRHNTAGKDCEKCKPFFSDRPWGRATVYDANEC 313
P+ C ++T G C CKP F +G+A + C
Sbjct: 1004 DPRTGQCLRCLYHTEGPHCAHCKPGF----YGQAARQSCHRC 1041
Score = 99 (39.9 bits), Expect = 3.5e-10, Sum P(2) = 3.5e-10
Identities = 24/105 (22%), Positives = 40/105 (38%)
Query: 191 CTDRHKKQGGRCKCNGHASRCIKSPQGELVCECRHNTAGKDCEKCKPFFSDRPWGRATVY 250
C + GGRC + H + G+ C C+ + G C++C+ F +G +
Sbjct: 415 CDPMGSQDGGRC--DPHDDPALGLVSGQ--CRCKEHVVGSRCQQCRDGF----FG-LSAS 465
Query: 251 DANECKGGRCKCNGHASRCIKSPQGALVCECRHNTAGKDCEKCKP 295
D C+ +C G + C C+ G+ C C P
Sbjct: 466 DPAGCRRCQCDARGTVPGTTSCDPNSGTCFCKRLVTGRGCNHCLP 510
Score = 99 (39.9 bits), Expect = 3.5e-10, Sum P(2) = 3.5e-10
Identities = 34/124 (27%), Positives = 45/124 (36%)
Query: 202 CKCNGHASRCIKS---PQGELVCECRHNTAGKDCEKCKPFFSDRPWGRATVYDANECKGG 258
C+CNG+ P+ C ++T G C CKP F +G+A C
Sbjct: 989 CECNGNIDPMDPDACDPRTGQCLRCLYHTEGPHCAHCKPGF----YGQAA---RQSCH-- 1039
Query: 259 RCKCN--G-------HASRCIKSPQGALVCECRHNTAGKDCEKCKPFFSDRPWGRATVYD 309
RC CN G RC P C C N G C++C P F W + +
Sbjct: 1040 RCTCNLLGTDPQQCPSIDRCNCDPSSGQ-CPCLPNVQGPTCDRCAPNF----WNLTSGHG 1094
Query: 310 ANEC 313
C
Sbjct: 1095 CQPC 1098
Score = 95 (38.5 bits), Expect = 9.0e-10, Sum P(2) = 9.0e-10
Identities = 27/103 (26%), Positives = 40/103 (38%)
Query: 199 GGRCK-CNGHASRCIKSPQGELV--CECRHNTAGKDCEKCKPFFSDRPWGRATVYDANEC 255
G C+ C H SR E C CR G+ C +C+ WG + +C
Sbjct: 1092 GHGCQPCTCHPSRARGPTCNEFTGQCHCRAGFGGRTCSECQELH----WGDPGL----QC 1143
Query: 256 KGGRCKCNGHASRCIKSPQGALVCECRHNTAGKDCEKCKPFFS 298
+ C C+ H + + C CR +G C++C FS
Sbjct: 1144 RA--CDCDPHGIDTPQCHRSTGHCSCRPGVSGVRCDQCARGFS 1184
Score = 92 (37.4 bits), Expect = 1.8e-09, Sum P(2) = 1.8e-09
Identities = 27/116 (23%), Positives = 44/116 (37%)
Query: 201 RCKCN--GHASRCIKSPQGELVCECRHNTAGKDCEKCKPFFSDRPWGRATVYDANECKGG 258
RC+C+ G C C+ G+ C C P WG + +D C+
Sbjct: 472 RCQCDARGTVPGTTSCDPNSGTCFCKRLVTGRGCNHCLPGH----WGLS--HDLLGCRPC 525
Query: 259 RCKCNGHASRCIKSPQGALVCECRHNTAGKDCEKCKPFFSDRPWGRATVYDANECK 314
C G G C CR + G+ CE+ +P + RP+ ++A + +
Sbjct: 526 DCDVGGALDPQCSEATGQ--CRCRQHMVGRRCEQVQPGYF-RPFLDHLTWEAEDTR 578
Score = 90 (36.7 bits), Expect = 2.9e-09, Sum P(2) = 2.9e-09
Identities = 25/95 (26%), Positives = 39/95 (41%)
Query: 202 CKCNGHASRCIK-SPQGELVCECRHNTAGKDCEKCKP-FFSDRPWGRATVYDANECKGGR 259
C+C+ S + +P G C C+ G+ C+ C P F+ P G C+ +
Sbjct: 786 CQCDPQGSLSSECNPHGGQ-CVCKPAVVGRRCDHCAPGFYGFGPTG---------CQACQ 835
Query: 260 CKCNGHASRCIKSPQGALVCECRHNTAGKDCEKCK 294
C G S + G C CR G C++C+
Sbjct: 836 CSPEGALSGLCEETSGQ--CPCRTGAFGLRCDRCQ 868
Score = 63 (27.2 bits), Expect = 1.8e-06, Sum P(2) = 1.8e-06
Identities = 14/46 (30%), Positives = 22/46 (47%)
Query: 260 CKCNGHASRCIK-SPQGALVCECRHNTAGKDCEKCKP-FFSDRPWG 303
C+C+ S + +P G C C+ G+ C+ C P F+ P G
Sbjct: 786 CQCDPQGSLSSECNPHGGQ-CVCKPAVVGRRCDHCAPGFYGFGPTG 830
>UNIPROTKB|E2RPP1 [details] [associations]
symbol:LAMA3 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0045995 "regulation of embryonic development"
evidence=IEA] [GO:0030334 "regulation of cell migration"
evidence=IEA] [GO:0030155 "regulation of cell adhesion"
evidence=IEA] [GO:0007155 "cell adhesion" evidence=IEA] [GO:0005606
"laminin-1 complex" evidence=IEA] [GO:0005102 "receptor binding"
evidence=IEA] InterPro:IPR009254 InterPro:IPR010307 Pfam:PF06008
Pfam:PF06009 GO:GO:0030155 GO:GO:0007155 InterPro:IPR013032
PROSITE:PS00022 Gene3D:2.60.120.200 InterPro:IPR008985
InterPro:IPR013320 SUPFAM:SSF49899 GO:GO:0030334 InterPro:IPR002049
InterPro:IPR001791 Pfam:PF00053 SMART:SM00180 SMART:SM00282
PROSITE:PS01248 PROSITE:PS50027 PROSITE:PS50025 Pfam:PF02210
GO:GO:0045995 GeneTree:ENSGT00700000104140 InterPro:IPR018031
InterPro:IPR000034 InterPro:IPR008211 Pfam:PF00052 Pfam:PF00055
SMART:SM00281 SMART:SM00136 PROSITE:PS51115 PROSITE:PS51117
GO:GO:0005606 CTD:3909 KO:K06240 OMA:DSCQGCS EMBL:AAEX03005452
RefSeq:XP_537297.2 Ensembl:ENSCAFT00000028869 GeneID:480173
KEGG:cfa:480173 Uniprot:E2RPP1
Length = 3337
Score = 236 (88.1 bits), Expect = 8.3e-28, Sum P(2) = 8.3e-28
Identities = 51/123 (41%), Positives = 68/123 (55%)
Query: 199 GGRCKCNGHASRC-IKSPQGELVCECRHNTAGKDCEKCKPFFSDRPWGRATVYDANECKG 257
GGRC CNGHA C +P+ CEC+H+T GK C++C ++ R W AT +NEC+
Sbjct: 296 GGRCVCNGHAQECNANNPEKLFQCECQHHTCGKTCDRCCAGYNQRRWRPATWEQSNECEA 355
Query: 258 GRCKCNGHASRCIKSP-----QGAL----------VC-ECRHNTAGKDCEKC-KPFFSDR 300
C C+GHA C P Q +L VC C+HNTAG +CE C K ++ R
Sbjct: 356 --CNCHGHAIDCYYDPDVERQQASLNIHGIYAGGGVCINCQHNTAGINCENCAKGYY--R 411
Query: 301 PWG 303
P+G
Sbjct: 412 PYG 414
Score = 164 (62.8 bits), Expect = 2.1e-16, Sum P(2) = 2.1e-16
Identities = 27/59 (45%), Positives = 37/59 (62%)
Query: 257 GGRCKCNGHASRC-IKSPQGALVCECRHNTAGKDCEKCKPFFSDRPWGRATVYDANECK 314
GGRC CNGHA C +P+ CEC+H+T GK C++C ++ R W AT +NEC+
Sbjct: 296 GGRCVCNGHAQECNANNPEKLFQCECQHHTCGKTCDRCCAGYNQRRWRPATWEQSNECE 354
Score = 157 (60.3 bits), Expect = 1.4e-15, Sum P(2) = 1.4e-15
Identities = 35/102 (34%), Positives = 51/102 (50%)
Query: 202 CKCNGHASRCIKSPQGELVC-ECRHNTAGKDCEKCKPFFSDRPWGRATVYDANECKGGRC 260
C CNGH++RC G +C C+HNTAG+ CE+CK R T++ + C C
Sbjct: 1690 CNCNGHSNRC---QDGSGICINCQHNTAGEHCERCKEGHY-----RNTIHGS--CSVCPC 1739
Query: 261 K-CNGHASRCIKSPQGALVCECRHNTAGKDCEKCKPFFSDRP 301
N A+ C+ + G + C C+ G CE+C P + P
Sbjct: 1740 PHSNSFATGCVVTG-GNVRCSCKPGYTGTQCERCAPGYFGNP 1780
Score = 141 (54.7 bits), Expect = 9.7e-06, P = 9.7e-06
Identities = 49/162 (30%), Positives = 71/162 (43%)
Query: 161 PLQFYSSQCKK-LYGRTATGVISRGNEQE-ALCTDRHKKQGGRCKCNGHASRCIKSP--- 215
P + + +C+ G+T + N++ T + C C+GHA C P
Sbjct: 313 PEKLFQCECQHHTCGKTCDRCCAGYNQRRWRPATWEQSNECEACNCHGHAIDCYYDPDVE 372
Query: 216 --QGEL----------VC-ECRHNTAGKDCEKC-KPFFSDRPWGRATVYDANECKGGRCK 261
Q L VC C+HNTAG +CE C K ++ RP+G V + C C
Sbjct: 373 RQQASLNIHGIYAGGGVCINCQHNTAGINCENCAKGYY--RPYG-VPVDAPHGCIP--CS 427
Query: 262 CNG-HASRCIKSPQGALVCECRHNTAGKDCEKCKPFFSDRPW 302
CN HA C P G+ C C+ N G +CEKC + + P+
Sbjct: 428 CNPEHADDC--EP-GSGRCTCKPNFQGDNCEKCAVGYYNFPF 466
Score = 136 (52.9 bits), Expect = 3.4e-13, Sum P(2) = 3.4e-13
Identities = 29/77 (37%), Positives = 41/77 (53%)
Query: 220 VCECRHNTAGKDCEKCKP-FFSDRPWGRATVYDANECKGGRCKCNGHASRCIKSPQGALV 278
+C C + G C+ C P ++ D G T C C CNGH++RC G+ +
Sbjct: 1656 MCACPPDYTGDSCQGCSPGYYRDNR-GSYT----GRCVP--CNCNGHSNRC---QDGSGI 1705
Query: 279 C-ECRHNTAGKDCEKCK 294
C C+HNTAG+ CE+CK
Sbjct: 1706 CINCQHNTAGEHCERCK 1722
Score = 127 (49.8 bits), Expect = 8.3e-28, Sum P(2) = 8.3e-28
Identities = 33/130 (25%), Positives = 62/130 (47%)
Query: 71 CHVCDAGSPRGRFPAEYLTDLNNPSNVTCWRSEAQTSVNSLSASPDNVTLTLSLGKKFEL 130
C C++ PR P D + + W+S +S + V +TL LG+ F +
Sbjct: 102 CDYCNSEDPRKAHPVTNAID----GSESWWQSPPLSS----GTQYNKVNVTLDLGQLFHV 153
Query: 131 TYISLSFCPKSIKPDSLAIYKSQDFGKSWQPLQFYSSQ---CKKLYGRTATGVISRGNEQ 187
Y+ + F S +PD + +S DFG ++ P Q+++ C + +G+ A I++ +
Sbjct: 154 AYLIIKFA-NSPRPDLWVLERSVDFGSTYSPWQYFAHSKVDCLEQFGQKANMAITQ--DD 210
Query: 188 EALCTDRHKK 197
+ LCT + +
Sbjct: 211 DVLCTTEYSR 220
Score = 106 (42.4 bits), Expect = 5.2e-10, Sum P(2) = 5.2e-10
Identities = 24/95 (25%), Positives = 42/95 (44%)
Query: 202 CKC---NGHASRCIKSPQGELVCECRHNTAGKDCEKCKPFFSDRPWGRATVYDANECKGG 258
C C N A+ C+ + G + C C+ G CE+C P + +G + + C+
Sbjct: 1737 CPCPHSNSFATGCVVTG-GNVRCSCKPGYTGTQCERCAPGY----FGNPQKFGGS-CQPC 1790
Query: 259 RCKCNGHASRCIKSPQGALVCECRHNTAGKDCEKC 293
C NGH S C + E + ++ ++C+ C
Sbjct: 1791 NCNSNGHLSSCHPLTGDCINQEPKDDSPAEECDDC 1825
Score = 98 (39.6 bits), Expect = 3.5e-09, Sum P(2) = 3.5e-09
Identities = 23/94 (24%), Positives = 44/94 (46%)
Query: 202 CKCN--GHASRCIKSPQGELVCECRHNTAGKDCEKCKP-FFSDRPWGRATVYDANECKGG 258
C+C+ G S + Q + C C+ + +G C+ C+ +F+ + ++ + C+G
Sbjct: 631 CQCHVAGTVSGIGECGQRDGDCHCKSHVSGDSCDTCEDGYFALK---KSNYFG---CQGC 684
Query: 259 RCKCNGHASRCIKSPQGALVCECRHNTAGKDCEK 292
+C G + P G C CR + GK C++
Sbjct: 685 QCDIGGAVTPMCSGPSGG--CHCREHVVGKACQR 716
Score = 97 (39.2 bits), Expect = 4.4e-09, Sum P(2) = 4.4e-09
Identities = 26/96 (27%), Positives = 38/96 (39%)
Query: 204 CNGHASRCIKSPQGEL-----VCECRHNTAGKDCEKCKPFFSDRPWGRATVYDANECKGG 258
C G S C P G L C+C+ + C CKP + W A + N C
Sbjct: 579 CQGSRSVC--DPAGTLDSSLGYCQCKPHAESPSCSICKPLY----WNLAKE-NPNGCSEC 631
Query: 259 RCKCNGHASRCIKSPQGALVCECRHNTAGKDCEKCK 294
+C G S + Q C C+ + +G C+ C+
Sbjct: 632 QCHVAGTVSGIGECGQRDGDCHCKSHVSGDSCDTCE 667
Score = 91 (37.1 bits), Expect = 1.8e-08, Sum P(2) = 1.8e-08
Identities = 28/105 (26%), Positives = 40/105 (38%)
Query: 202 CKCN-----GHASRCIKSPQGELVCECRHNTAGKDCEKCKPFFSDRPWGRATVYDANECK 256
C C+ G A+R G+ C C+ G+ C++C F Y EC
Sbjct: 1359 CNCSRRGTVGAATRECDRDHGQ--CRCKPRITGRQCDRCASGF----------YHFPECI 1406
Query: 257 GGRCKCNGHASRCIKSPQGALVCECRHNTAGKDCEKCKP--FFSD 299
C CN + G VC C+ N G +C C+ F+ D
Sbjct: 1407 P--CHCNKDGTESGVCDPGTGVCLCKENVEGTECNVCREGSFYLD 1449
Score = 89 (36.4 bits), Expect = 2.9e-08, Sum P(2) = 2.9e-08
Identities = 33/112 (29%), Positives = 43/112 (38%)
Query: 202 CKCNG-HASRCIKSPQGELVCECRHNTAGKDCEKCKPFFSDRPWG-RATVYD-------- 251
C CN HA C P G C C+ N G +CEKC + + P+ R ++
Sbjct: 426 CSCNPEHADDC--EP-GSGRCTCKPNFQGDNCEKCAVGYYNFPFCLRIPIFPVSTPSPED 482
Query: 252 --ANECKGGRCKCNGHASRCIKSPQGALVCECRHNTAGKDCEKCKPFFSDRP 301
A + KG C G I G C CR G C+ C+ F P
Sbjct: 483 PVAGDIKGCDCNWEGVLPE-ICDAYGR--CLCRPGVEGPRCDACRVGFYSFP 531
Score = 87 (35.7 bits), Expect = 4.7e-08, Sum P(2) = 4.7e-08
Identities = 24/98 (24%), Positives = 42/98 (42%)
Query: 202 CKCNGHASRCIKSPQGELV--CECRHNTAGKDCEKCKPFFSDRPWGRATVYDANECKGGR 259
C+C+ S ++P + CEC+ G+ C++C + YD C+G R
Sbjct: 536 CQCSVLGS--YQTPCNPVTGQCECQPGITGQRCDRCL----------SGAYDFPHCQGSR 583
Query: 260 CKCNGHASRCIKSPQGALVCECRHNTAGKDCEKCKPFF 297
C+ + + S G C+C+ + C CKP +
Sbjct: 584 SVCDPAGT--LDSSLG--YCQCKPHAESPSCSICKPLY 617
Score = 75 (31.5 bits), Expect = 8.0e-07, Sum P(2) = 8.0e-07
Identities = 37/137 (27%), Positives = 48/137 (35%)
Query: 178 TGVISRGNEQEA-LCTDRHKKQGGRC-KCN-G-----HASRCIKSPQ--GELV--CECRH 225
TG I R E C R G +C +C G H C P+ E+ C C
Sbjct: 1274 TGAIGRPCSPEGGQCPCRPSVIGRQCTRCRMGYYGFPHCKPCNCGPRLCDEMTGKCLCPP 1333
Query: 226 NTAGKDCEKCKPF-FSDRPWGRATVYDANECKGGRCKCNGHASRCIKSPQGALVCECRHN 284
+T CE C FS P + C R G A+R G C C+
Sbjct: 1334 HTVRPQCEVCDTHSFSFHP-----LAGCEGCNCSRRGTVGAATRECDRDHGQ--CRCKPR 1386
Query: 285 TAGKDCEKCKPFFSDRP 301
G+ C++C F P
Sbjct: 1387 ITGRQCDRCASGFYHFP 1403
Score = 52 (23.4 bits), Expect = 0.00018, Sum P(2) = 0.00018
Identities = 23/79 (29%), Positives = 29/79 (36%)
Query: 245 GRATVYDANECKGGRCKCNGHASRCIKSPQGALVCECRHNTA-GKDCEK------CKPFF 297
G + Y + G CK N S +GAL CEC A G+ C C+P
Sbjct: 1236 GGNSFYIDPQTASGFCK-NAARSLVALYHKGALPCECHPTGAIGRPCSPEGGQCPCRPSV 1294
Query: 298 SDRPWGRATV--YDANECK 314
R R + Y CK
Sbjct: 1295 IGRQCTRCRMGYYGFPHCK 1313
>UNIPROTKB|F1MC13 [details] [associations]
symbol:LAMA5 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0090002 "establishment of protein localization to
plasma membrane" evidence=IEA] [GO:0060445 "branching involved in
salivary gland morphogenesis" evidence=IEA] [GO:0043259 "laminin-10
complex" evidence=IEA] [GO:0042475 "odontogenesis of
dentin-containing tooth" evidence=IEA] [GO:0042384 "cilium
assembly" evidence=IEA] [GO:0042127 "regulation of cell
proliferation" evidence=IEA] [GO:0034446 "substrate
adhesion-dependent cell spreading" evidence=IEA] [GO:0030324 "lung
development" evidence=IEA] [GO:0016331 "morphogenesis of embryonic
epithelium" evidence=IEA] [GO:0007517 "muscle organ development"
evidence=IEA] [GO:0007229 "integrin-mediated signaling pathway"
evidence=IEA] [GO:0005615 "extracellular space" evidence=IEA]
[GO:0005178 "integrin binding" evidence=IEA] [GO:0001942 "hair
follicle development" evidence=IEA] [GO:0001755 "neural crest cell
migration" evidence=IEA] [GO:0001738 "morphogenesis of a polarized
epithelium" evidence=IEA] [GO:0001658 "branching involved in
ureteric bud morphogenesis" evidence=IEA] [GO:0045995 "regulation
of embryonic development" evidence=IEA] [GO:0030334 "regulation of
cell migration" evidence=IEA] [GO:0030155 "regulation of cell
adhesion" evidence=IEA] [GO:0005606 "laminin-1 complex"
evidence=IEA] InterPro:IPR009254 InterPro:IPR010307 Pfam:PF06008
Pfam:PF06009 GO:GO:0005615 GO:GO:0030155 GO:GO:0030324
GO:GO:0001755 InterPro:IPR013032 PROSITE:PS00022 GO:GO:0042127
Gene3D:2.60.120.200 InterPro:IPR008985 InterPro:IPR013320
SUPFAM:SSF49899 GO:GO:0030334 GO:GO:0001942 GO:GO:0007517
GO:GO:0007229 GO:GO:0042475 InterPro:IPR002049 InterPro:IPR001791
Pfam:PF00053 SMART:SM00180 SMART:SM00282 PROSITE:PS01248
PROSITE:PS50027 PROSITE:PS50025 GO:GO:0042384 GO:GO:0001738
GO:GO:0034446 GO:GO:0090002 GO:GO:0016331 GO:GO:0001658
GO:GO:0060445 Pfam:PF02210 GO:GO:0045995
GeneTree:ENSGT00700000104140 InterPro:IPR018031 InterPro:IPR000034
InterPro:IPR008211 Pfam:PF00052 Pfam:PF00055 SMART:SM00281
SMART:SM00136 PROSITE:PS51115 PROSITE:PS51117 GO:GO:0005606
OMA:LRHTTGP GO:GO:0043259 EMBL:DAAA02036259 EMBL:DAAA02036256
EMBL:DAAA02036257 EMBL:DAAA02036258 IPI:IPI00717460
Ensembl:ENSBTAT00000003981 Uniprot:F1MC13
Length = 3656
Score = 237 (88.5 bits), Expect = 1.6e-27, Sum P(2) = 1.6e-27
Identities = 51/122 (41%), Positives = 63/122 (51%)
Query: 199 GGRCKCNGHASRC-IKSPQG--ELVCECRHNTAGKDCEKCKPFFSDRPWGRATVYDANEC 255
GGRC C+GHA C K P L C C+HNT G C++C P F+ +PW AT ANEC
Sbjct: 279 GGRCVCHGHADVCDAKDPTDPFRLQCACQHNTCGGSCDRCCPGFNQQPWRPATTDSANEC 338
Query: 256 KGGRCKCNGHASRCIKSP---------------QGALVC-ECRHNTAGKDCEKCKPFFSD 299
+ C C GHA C P QG VC +C+H+T G +CE+C P F
Sbjct: 339 QS--CNCYGHAHDCYYDPEVDRRNASQNQDQVYQGGGVCIDCQHHTTGINCEQCLPGFYR 396
Query: 300 RP 301
P
Sbjct: 397 SP 398
Score = 165 (63.1 bits), Expect = 4.0e-16, Sum P(2) = 4.0e-16
Identities = 30/61 (49%), Positives = 37/61 (60%)
Query: 257 GGRCKCNGHASRC-IKSPQGA--LVCECRHNTAGKDCEKCKPFFSDRPWGRATVYDANEC 313
GGRC C+GHA C K P L C C+HNT G C++C P F+ +PW AT ANEC
Sbjct: 279 GGRCVCHGHADVCDAKDPTDPFRLQCACQHNTCGGSCDRCCPGFNQQPWRPATTDSANEC 338
Query: 314 K 314
+
Sbjct: 339 Q 339
Score = 143 (55.4 bits), Expect = 1.4e-13, Sum P(2) = 1.4e-13
Identities = 36/102 (35%), Positives = 46/102 (45%)
Query: 202 CKCNGHASRCIKSPQGELVC-ECRHNTAGKDCEKCKPFFSDRPWGRATVYDANECKGGRC 260
C+C+GH+ RC+ P G VC C+HNT G CE+C+ F R C
Sbjct: 1824 CQCHGHSDRCL--P-GSGVCIGCQHNTEGDHCERCQAGFV-RTGSEDPAAPCISCPCPLA 1879
Query: 261 -KCNGHASRCIKSPQGALVCECRHNTAGKDCEKCKPFFSDRP 301
N A+ CI G C C+ AG CE+C P F P
Sbjct: 1880 VPSNNFATGCILRG-GRTQCLCKPGYAGASCERCAPGFFGNP 1920
Score = 124 (48.7 bits), Expect = 1.6e-27, Sum P(2) = 1.6e-27
Identities = 43/184 (23%), Positives = 72/184 (39%)
Query: 39 PDFVNAAFGQEVKVNSVCGLESPER---------YCDTSGA---------------CHVC 74
P + N A G + ++ CG E+P R YC G C +C
Sbjct: 29 PPYFNLAEGARIAASATCGEEAPARGAPRPTEDLYCKLVGGPVAGGDPNQTIQGQYCDIC 88
Query: 75 DAGSPRGRFPAEYLTDLNNPSNVTCWRSEAQTSVNSLSASPDNVTLTLSLGKKFELTYIS 134
A S P D W+S S + V +TL LG+ F + Y+
Sbjct: 89 TAASSNRAHPVSNAID----GTERWWQSPPL----SRGLEYNEVNVTLDLGQVFHVAYVL 140
Query: 135 LSFCPKSIKPDSLAIYKSQDFGKSWQPLQFYSSQCKKLYGRTATGVISR-GNEQEALCTD 193
+ F S +PD + +S DFG ++QP Q+++S + R + R + + +C+
Sbjct: 141 IKFA-NSPRPDLWVLERSTDFGHTYQPWQYFASSKRDCLERFGLRTLERITQDDDVICST 199
Query: 194 RHKK 197
+ +
Sbjct: 200 EYSR 203
Score = 120 (47.3 bits), Expect = 4.8e-11, Sum P(2) = 4.8e-11
Identities = 28/79 (35%), Positives = 42/79 (53%)
Query: 220 VCECRHNTAGKDCEKCKPFFSDRPWGRATVYDANECKGGRCKCNGHASRCIKSPQGALVC 279
+C C N G C++C P + G ++ C C+C+GH+ RC+ P G+ VC
Sbjct: 1790 LCMCPANYLGDSCQECAPGYYRDVKG---LF-LGRCIP--CQCHGHSDRCL--P-GSGVC 1840
Query: 280 -ECRHNTAGKDCEKCKPFF 297
C+HNT G CE+C+ F
Sbjct: 1841 IGCQHNTEGDHCERCQAGF 1859
Score = 118 (46.6 bits), Expect = 7.8e-11, Sum P(2) = 7.8e-11
Identities = 37/118 (31%), Positives = 49/118 (41%)
Query: 202 CKCNGHASRCIKSP---------------QGELVC-ECRHNTAGKDCEKCKPFFSDRPWG 245
C C GHA C P QG VC +C+H+T G +CE+C P F P
Sbjct: 341 CNCYGHAHDCYYDPEVDRRNASQNQDQVYQGGGVCIDCQHHTTGINCEQCLPGFYRSP-- 398
Query: 246 RATVYDANECKGGRCKCNGHAS--RCIKSPQGALVCECRHNTAGKDCEKCKPFFSDRP 301
+ + C+ RC C + C + G C CR N G C+ C F+D P
Sbjct: 399 DHPLDSPHACR--RCNCESDFTDGTC-EDLTGR--CYCRPNFTGARCDACAEGFTDFP 451
Score = 113 (44.8 bits), Expect = 2.6e-10, Sum P(2) = 2.6e-10
Identities = 31/105 (29%), Positives = 45/105 (42%)
Query: 198 QGGRCKCNGHASRCIKSPQGELVCECRHNTAGKDCEKCKPFFSDRPWGRATVYDANECKG 257
+ G C G A P+ + C CR + G C++CKP F WG + + C
Sbjct: 704 EAGSCHPAGLAPADRVPPEAQAPCTCRAHVEGPSCDRCKPGF----WGLSPS-NPEGCT- 757
Query: 258 GRCKCN-----GHASRCIKSPQGALVCECRHNTAGKDCEKCKPFF 297
RC C+ G A++C G C C+ + G+ C CK F
Sbjct: 758 -RCNCDPRGTLGGAAQC---QLGNGQCFCKPHVCGQTCAACKDGF 798
Score = 107 (42.7 bits), Expect = 1.1e-09, Sum P(2) = 1.1e-09
Identities = 34/114 (29%), Positives = 46/114 (40%)
Query: 205 NGHASRCIKSPQGELVCECRHNTAGKDCEKCKPFFSDRPWGRATVYDANECKGGRCKCNG 264
N A+ CI G C C+ AG CE+C P F +G V ++ C+ C NG
Sbjct: 1883 NNFATGCILRG-GRTQCLCKPGYAGASCERCAPGF----FGNPLVLGSS-CQPCDCSGNG 1936
Query: 265 HASRCIKS--PQGALVCECRHNTAGKDCEKCKP-FFSDR--PWGRATVYDANEC 313
+ P C +T G CE C P F+ + P G T D + C
Sbjct: 1937 DPNMLFSDCDPLTGTCRGCLRHTTGPRCESCAPGFYGNALLP-GNCTRCDCSPC 1989
Score = 106 (42.4 bits), Expect = 1.4e-09, Sum P(2) = 1.4e-09
Identities = 29/102 (28%), Positives = 37/102 (36%)
Query: 202 CKCNGHASRCIKSPQGELVCECRHNTAGKDCEKCKPFFSDRPWGRATVYDANECKGGRCK 261
C C+ S C CR G C+ C P G Y+ C+ G C
Sbjct: 660 CHCSPEGSLHAACDPHSGQCSCRPRVTGLRCDMCVP-------G---AYNFPYCEAGSCH 709
Query: 262 CNGHASRCIKSPQGALVCECRHNTAGKDCEKCKPFFSDRPWG 303
G A P+ C CR + G C++CKP F WG
Sbjct: 710 PAGLAPADRVPPEAQAPCTCRAHVEGPSCDRCKPGF----WG 747
Score = 96 (38.9 bits), Expect = 1.4e-08, Sum P(2) = 1.4e-08
Identities = 26/96 (27%), Positives = 38/96 (39%)
Query: 202 CKCNGHASRCIKSPQGEL---VCECRHNTAGKDCEKCKPFFSDRPWGRATVYDANECKGG 258
C C+G + + P + C+CR N AG+ C+ C P F P C+
Sbjct: 1493 CNCSGPGVQELMDPTCDADSGQCKCRPNVAGRRCDTCAPGFHGFP----------SCRPC 1542
Query: 259 RCKCNGHASRCIKSPQGALVCECRHNTAGKDCEKCK 294
C G A G C C+ N G C++C+
Sbjct: 1543 DCHEAGSAPGTCDPLTGQ--CYCKENVQGPRCDQCR 1576
Score = 95 (38.5 bits), Expect = 1.8e-08, Sum P(2) = 1.8e-08
Identities = 31/91 (34%), Positives = 36/91 (39%)
Query: 198 QGGR-CKCNGHASRCIKSPQ-GELVCECRHNTAGKDCEKCKPFFSDRPWGRATVYDAN-E 254
+G R C C A PQ G+ C CR T G C +C P WG +
Sbjct: 2026 EGCRPCACGPAAESSECHPQSGQ--CHCRPGTGGPQCRECAPGH----WGLPEQGCRRCQ 2079
Query: 255 CKGGRCKCNGHASRCIKSPQ-GALVCE-CRH 283
C+GG C H RC P G CE C H
Sbjct: 2080 CQGGHCDL--HTGRCTCPPGLGGERCETCSH 2108
Score = 94 (38.1 bits), Expect = 2.3e-08, Sum P(2) = 2.3e-08
Identities = 29/97 (29%), Positives = 42/97 (43%)
Query: 201 RCKCN-----GHASRCIKSPQGELVCECRHNTAGKDCEKCKPFFSDRPWGRATVYDANEC 255
RC C+ G A++C + G+ C C+ + G+ C CK F +G D C
Sbjct: 758 RCNCDPRGTLGGAAQC-QLGNGQ--CFCKPHVCGQTCAACKDGF----FGLDQA-DYFGC 809
Query: 256 KGGRCKCNGHASRCIKSPQGALVCECRHNTAGKDCEK 292
+ RC G + + GA C CR NT G C +
Sbjct: 810 RSCRCDVGGALGQSCELRTGA--CMCRPNTQGSTCSE 844
Score = 94 (38.1 bits), Expect = 2.3e-08, Sum P(2) = 2.3e-08
Identities = 29/104 (27%), Positives = 39/104 (37%)
Query: 200 GRCKCNGHASRCIKSPQGELVCE-------CRHNTAGKDCEKCKPFFSDRPWGRATVYDA 252
G G+ +RC SP G C+ C+ G C++C+ G +
Sbjct: 1973 GNALLPGNCTRCDCSPCGTEACDPHSGHCLCKAGVTGLRCDRCQE-------GH---FGF 2022
Query: 253 NECKGGR-CKCNGHASRCIKSPQGALVCECRHNTAGKDCEKCKP 295
C+G R C C A PQ C CR T G C +C P
Sbjct: 2023 EGCEGCRPCACGPAAESSECHPQSGQ-CHCRPGTGGPQCRECAP 2065
Score = 93 (37.8 bits), Expect = 3.0e-08, Sum P(2) = 3.0e-08
Identities = 29/103 (28%), Positives = 43/103 (41%)
Query: 202 CKCNGHASRCIKSPQGELVCECRHNTAGKDCEKCKPFFSDRPWGRATVYDANECKGGRCK 261
C C+G R G+ +C R T DC C+P + +G + EC
Sbjct: 1449 CDCSG---RLCDELTGQCICPPR--TIPPDCLVCQP----QTFGCHPLVGCEECN----- 1494
Query: 262 CNGHASRCIKSPQ---GALVCECRHNTAGKDCEKCKPFFSDRP 301
C+G + + P + C+CR N AG+ C+ C P F P
Sbjct: 1495 CSGPGVQELMDPTCDADSGQCKCRPNVAGRRCDTCAPGFHGFP 1537
Score = 92 (37.4 bits), Expect = 3.7e-08, Sum P(2) = 3.7e-08
Identities = 33/111 (29%), Positives = 43/111 (38%)
Query: 201 RCKCNGHAS--RCIKSPQGELVCECRHNTAGKDCEKCKPFFSDRPW----GRATVYDANE 254
RC C + C + G C CR N G C+ C F+D P ++ D E
Sbjct: 410 RCNCESDFTDGTC-EDLTGR--CYCRPNFTGARCDACAEGFTDFPHCYPVPSSSHNDTGE 466
Query: 255 --CKGGR---CKCNGHASR---CIKSPQGALVCECRHNTAGKDCEKCKPFF 297
G C C+ ++ C K PQ C C+ N G CE C P F
Sbjct: 467 QVLPAGHIVNCDCSAAGTQGNACRKDPQVGH-CVCKPNFQGTHCELCAPGF 516
Score = 76 (31.8 bits), Expect = 1.6e-06, Sum P(2) = 1.6e-06
Identities = 31/106 (29%), Positives = 46/106 (43%)
Query: 199 GGR-CKCN--GHASRCIKSPQGELVCECRHNTAGKDCEKCKPFFSDRPWGRATVYDANEC 255
G R C C+ G S + G+ C CR + G+DC +C + WG + +C
Sbjct: 1399 GARPCGCHEVGAMSPTCEPFGGQ--CPCRAHVIGRDCSRCATGY----WGFPSCRPC-DC 1451
Query: 256 KGGRCKCNGHASRCIKSPQ----GALVCECR----HNTAGKDCEKC 293
G R C+ +CI P+ LVC+ + H G CE+C
Sbjct: 1452 SG-RL-CDELTGQCICPPRTIPPDCLVCQPQTFGCHPLVG--CEEC 1493
Score = 66 (28.3 bits), Expect = 1.7e-05, Sum P(2) = 1.7e-05
Identities = 35/133 (26%), Positives = 47/133 (35%)
Query: 177 ATGVISRGNEQEALCTDRHKKQGGRC-KCN-GHASRCIKSPQGELVCECRHN-TAGKDCE 233
ATG I RG + LC + G C +C G + C+C N
Sbjct: 1886 ATGCILRGGRTQCLCKPGYA--GASCERCAPGFFGNPLVLGSSCQPCDCSGNGDPNMLFS 1943
Query: 234 KCKPFFSD-RPWGRATVYDANE-CK-G--GRCKCNGHASRCIKSPQGALVCE-------C 281
C P R R T E C G G G+ +RC SP G C+ C
Sbjct: 1944 DCDPLTGTCRGCLRHTTGPRCESCAPGFYGNALLPGNCTRCDCSPCGTEACDPHSGHCLC 2003
Query: 282 RHNTAGKDCEKCK 294
+ G C++C+
Sbjct: 2004 KAGVTGLRCDRCQ 2016
Score = 65 (27.9 bits), Expect = 2.2e-05, Sum P(2) = 2.2e-05
Identities = 23/74 (31%), Positives = 31/74 (41%)
Query: 202 CKCN--GHASRCIKSPQGELVCECRHNTAGKDCEKCKPFFSDRPWGRATVYDANECKG-G 258
C C+ G A G+ C C+ N G C++C+ G ++ DA KG
Sbjct: 1542 CDCHEAGSAPGTCDPLTGQ--CYCKENVQGPRCDQCR-------LGTFSL-DAANPKGCT 1591
Query: 259 RCKCNGHASRCIKS 272
RC C G RC S
Sbjct: 1592 RCFCFGATDRCRSS 1605
Score = 57 (25.1 bits), Expect = 0.00014, Sum P(2) = 0.00014
Identities = 27/113 (23%), Positives = 41/113 (36%)
Query: 202 CKCN--GHASRCIKSPQGELVCECRHNTAGKDCEKCKPFFSDRPWGRATVYDANECKGGR 259
C+C+ G G+ C CR G C++C P + P C+
Sbjct: 524 CQCSSPGVVDGTCDRDSGQ--CTCRTGFEGAACDRCAPGYFHFPL----------CQ--L 569
Query: 260 CKCNGHASRCIKSPQG---ALVCECRHNTAGKDCEKCKPFFSDRPWGRATVYD 309
C C+ + P+G A C CR G C++C+ + P A D
Sbjct: 570 CGCSPVGTL----PEGCDDAGRCLCRPEFNGPHCDRCRLGYHGYPECHACACD 618
Score = 41 (19.5 bits), Expect = 4.9e-05, Sum P(2) = 4.9e-05
Identities = 18/72 (25%), Positives = 26/72 (36%)
Query: 16 VC-GEKIDLNSDPCYENGRPRRCIPDFVNAAFGQEVKVNSVCGLESPERYCDTSGACHVC 74
VC G +D+ P + ++ N QEV V +P++ T C
Sbjct: 1072 VCWGTDVDVQLQVAVPQPGPYALVVEYANEDARQEVDVAVHTPQRAPQQGVLTLHPCSYR 1131
Query: 75 DAGSPRGRFPAE 86
GS R AE
Sbjct: 1132 CVGSGSIRLTAE 1143
Score = 37 (18.1 bits), Expect = 0.00012, Sum P(2) = 0.00012
Identities = 8/19 (42%), Positives = 8/19 (42%)
Query: 65 CDTSGACHVCDAGSPRGRF 83
C G VCDA P F
Sbjct: 282 CVCHGHADVCDAKDPTDPF 300
Score = 37 (18.1 bits), Expect = 0.00012, Sum P(2) = 0.00012
Identities = 8/21 (38%), Positives = 10/21 (47%)
Query: 60 SPERYCDTSGACHVCD--AGS 78
S ++ C G C C AGS
Sbjct: 622 SVDQLCGAGGLCRCCSGYAGS 642
>WB|WBGene00002248 [details] [associations]
symbol:lam-3 species:6239 "Caenorhabditis elegans"
[GO:0005604 "basement membrane" evidence=IEA;IDA] [GO:0005102
"receptor binding" evidence=IEA] [GO:0005606 "laminin-1 complex"
evidence=IEA] [GO:0030155 "regulation of cell adhesion"
evidence=IEA] [GO:0030334 "regulation of cell migration"
evidence=IEA] [GO:0045995 "regulation of embryonic development"
evidence=IEA] [GO:0007155 "cell adhesion" evidence=IEA] [GO:0040007
"growth" evidence=IMP] [GO:0002119 "nematode larval development"
evidence=IMP] [GO:0009792 "embryo development ending in birth or
egg hatching" evidence=IMP] [GO:0040011 "locomotion" evidence=IMP]
[GO:0040018 "positive regulation of multicellular organism growth"
evidence=IMP] [GO:0010171 "body morphogenesis" evidence=IMP]
[GO:0009790 "embryo development" evidence=IMP] InterPro:IPR009254
InterPro:IPR010307 Pfam:PF06008 Pfam:PF06009 GO:GO:0009792
GO:GO:0040007 GO:GO:0002119 GO:GO:0030155 GO:GO:0010171
GO:GO:0040011 GO:GO:0040018 GO:GO:0007155 InterPro:IPR013032
PROSITE:PS00022 Gene3D:2.60.120.200 InterPro:IPR008985
InterPro:IPR013320 SUPFAM:SSF49899 GO:GO:0030334 InterPro:IPR002049
InterPro:IPR001791 Pfam:PF00053 SMART:SM00180 SMART:SM00282
PROSITE:PS01248 PROSITE:PS50027 PROSITE:PS50025 GO:GO:0005604
HSSP:P02468 Pfam:PF02210 GO:GO:0045995 GeneTree:ENSGT00700000104140
InterPro:IPR018031 InterPro:IPR000034 InterPro:IPR008211
Pfam:PF00052 Pfam:PF00055 SMART:SM00281 SMART:SM00136
PROSITE:PS51115 PROSITE:PS51117 KO:K05637 GO:GO:0005606 EMBL:Z81125
EMBL:AF074902 EMBL:AL008585 PIR:F87908 PIR:T23064 PIR:T43291
RefSeq:NP_492775.2 UniGene:Cel.19655 ProteinModelPortal:G5ECE3
SMR:G5ECE3 EnsemblMetazoa:T22A3.8 GeneID:172952
KEGG:cel:CELE_T22A3.8 CTD:172952 WormBase:T22A3.8 OMA:TAINEAH
NextBio:877661 Uniprot:G5ECE3
Length = 3102
Score = 227 (85.0 bits), Expect = 1.7e-27, Sum P(2) = 1.7e-27
Identities = 50/133 (37%), Positives = 67/133 (50%)
Query: 199 GGRCKCNGHASRCIKSP-QGELVCECRHNTAGKDCEKCKPFFSDRPWGRATVYDANECKG 257
GG+C C GHA C P G+ CECRHNT G+ C +C P F+ PW T N C+
Sbjct: 293 GGQCICYGHAESCPSDPVTGQFKCECRHNTCGESCNRCCPLFNQLPWKPGTNSHPNVCQ- 351
Query: 258 GRCKCNGHASRCIK-----------SPQGALV----C-ECRHNTAGKDCEKCKPFFSDRP 301
+C+C HA C+ +P+G C EC HNT G +CE+CK + RP
Sbjct: 352 -QCQCFNHAHSCVYDDELDRNKWSITPEGVYEGGGRCLECAHNTEGFNCERCKDGYY-RP 409
Query: 302 WGRATVYDANECK 314
G + Y + C+
Sbjct: 410 SGLSH-YREDACR 421
Score = 147 (56.8 bits), Expect = 1.7e-27, Sum P(2) = 1.7e-27
Identities = 51/180 (28%), Positives = 78/180 (43%)
Query: 35 RRCIPDFVNAAFGQEVKVNSVCGLESPERYC------------DT-SGACHVCDAGSPRG 81
R P+ N A + CG + E YC +T S C +CDA +
Sbjct: 46 RGLFPNIFNLATNSLITATDTCGQYTAEEYCKLVEHVLLRKTTNTQSPQCDICDANNVHK 105
Query: 82 RFPAEYLTDLNNPSNVTCWRSEAQTSVNSLSASPDNVTLTLSLGKKFELTYISLSFCPKS 141
R P EY D W+S + N L + V +T+ L +++++ YI L S
Sbjct: 106 RHPIEYAID----GTRRWWQSPSLA--NGLRF--EKVNITIDLRQEYQVAYIILKM-GNS 156
Query: 142 IKPDSLAIYKSQDFGKSWQPLQFYSSQ---CKKLYGRTAT-GVISRGNEQEALCTDRHKK 197
+P + + KS D G+ ++P Q+Y+ Q C + +G AT GV E E CT + K
Sbjct: 157 PRPGTWVLEKSLD-GEYYEPWQYYAMQDAECMRQFGIPATTGVPRFQKEDEVHCTSEYSK 215
Score = 142 (55.0 bits), Expect = 4.6e-16, Sum P(2) = 4.6e-16
Identities = 33/82 (40%), Positives = 39/82 (47%)
Query: 217 GELVCECRHNTAGKDCEKCKPFFSDRPWGRATVYDANECKGGRCK---CNGHASRCIKSP 273
G VCEC N AG CE C P + R N+ GGRC+ C+G++ C P
Sbjct: 737 GVEVCECPENFAGNSCESCVPGYR-----RVN----NQLYGGRCEKCDCHGNSEEC--DP 785
Query: 274 QGALVCECRHNTAGKDCEKCKP 295
CRHNT G CE CKP
Sbjct: 786 FTGECLNCRHNTTGSRCELCKP 807
Score = 133 (51.9 bits), Expect = 3.9e-15, Sum P(2) = 3.9e-15
Identities = 32/98 (32%), Positives = 43/98 (43%)
Query: 202 CKCNGHASRCIKSPQGELVCECRHNTAGKDCEKCKPFFSDRPWGRATVYDANECKGGRCK 261
C C+GH+ C +P + +C HNT G CE C P + G A AN C +C
Sbjct: 1540 CSCHGHSQTC--NPDTSVCTDCEHNTFGDFCEHCLPGYI----GDAREGGANACT--KCA 1591
Query: 262 C----NGHASRCIKSPQG-ALVCE-CRHNTAGKDCEKC 293
C N + C+ G VC C+ G+ CE C
Sbjct: 1592 CPLVENSFSDSCVAVDHGRGYVCNSCKPGYTGQYCETC 1629
Score = 121 (47.7 bits), Expect = 6.9e-14, Sum P(2) = 6.9e-14
Identities = 29/87 (33%), Positives = 42/87 (48%)
Query: 222 ECRHNTAGKDCEKCKPFFSDRPWGRATVYDANECKGGRCKCNGHAS-RCIKSPQGALV-- 278
EC HNT G +CE+CK + RP G + Y + C+ C G S C++ Q A
Sbjct: 389 ECAHNTEGFNCERCKDGYY-RPSGLSH-YREDACRTCECDPVGSVSDACVRDDQSAENGQ 446
Query: 279 ----CECRHNTAGKDCEKCKPFFSDRP 301
C C+ G+ CE+C P + + P
Sbjct: 447 KPGDCICKPGFGGRRCERCAPGYRNHP 473
Score = 116 (45.9 bits), Expect = 2.3e-13, Sum P(2) = 2.3e-13
Identities = 31/103 (30%), Positives = 43/103 (41%)
Query: 202 CKCNGHAS-----RCIKSPQGELVCECRHNTAGKDCEKCKPFFSDRPWGRATVYDANECK 256
C CNG+ C S G+ + +C +T G CE CK + WG A ++ C
Sbjct: 889 CTCNGNIDPMGIGNC-DSETGKCL-KCIGHTTGDSCESCK----EHHWGNAQLHTCKPC- 941
Query: 257 GGRCKCNGHASRCIKSPQGALVCECRHNTAGKDCEKCKPFFSD 299
G C G + G CEC+ N G C++CK D
Sbjct: 942 -G-CHTQGAVNPQCSEENGE--CECKENYIGAQCDRCKENHGD 980
Score = 115 (45.5 bits), Expect = 2.9e-13, Sum P(2) = 2.9e-13
Identities = 34/107 (31%), Positives = 44/107 (41%)
Query: 191 CTDRHKK-QGG--RCKCNGHASRCIKSPQGELVCECRHNTAGKDCEKCKPFFSDRPWGRA 247
C + H + G C CN S Q C C+ GK C++C+P + +
Sbjct: 974 CKENHGDVENGCPACDCNDTGSIGSDCDQVSGQCNCKQGVFGKQCDQCRPSYFN------ 1027
Query: 248 TVYDANECKGGRCKCNGHAS-RCIKSPQGALVCECRHNTAGKDCEKC 293
DA C+ C CN + S K Q CECR N G CEKC
Sbjct: 1028 -FTDAG-CQF--CHCNIYGSIEDGKCDQTTGKCECRENVEGTMCEKC 1070
Score = 113 (44.8 bits), Expect = 4.7e-13, Sum P(2) = 4.7e-13
Identities = 38/122 (31%), Positives = 49/122 (40%)
Query: 199 GGRCK---CNGHASRCIKSP-QGELVCECRHNTAGKDCEKCKPFFSDRPWGRATVYDANE 254
GGRC+ C+G++ C P GE + CRHNT G CE CKP P + +
Sbjct: 768 GGRCEKCDCHGNSEEC--DPFTGECL-NCRHNTTGSRCELCKPGHVGNPSRGGELGACEQ 824
Query: 255 CKGGRCKCNGHASRCIKSPQGAL----------VC-ECRHNTAGKDCEKCKP-FFSDRPW 302
C+ N + CI + L VC C G CE C FF D
Sbjct: 825 CECPSLDLNPNPE-CISTELAVLGSVASNEDNYVCINCPLGYEGNKCEYCSDGFFEDPLT 883
Query: 303 GR 304
G+
Sbjct: 884 GK 885
Score = 107 (42.7 bits), Expect = 2.0e-12, Sum P(2) = 2.0e-12
Identities = 38/126 (30%), Positives = 53/126 (42%)
Query: 192 TDRHKKQGGRCKCNGHASRCIK-----------SPQGELV----C-ECRHNTAGKDCEKC 235
T+ H +C+C HA C+ +P+G C EC HNT G +CE+C
Sbjct: 343 TNSHPNVCQQCQCFNHAHSCVYDDELDRNKWSITPEGVYEGGGRCLECAHNTEGFNCERC 402
Query: 236 KPFFSDRPWGRATVYDANECKGGRCKCNGHAS-RCIKSPQGALVCECRHNTAGKDCEKCK 294
K + RP G + Y + C+ C G S C++ Q A + DC CK
Sbjct: 403 KDGYY-RPSGLSH-YREDACRTCECDPVGSVSDACVRDDQSA-----ENGQKPGDCI-CK 454
Query: 295 PFFSDR 300
P F R
Sbjct: 455 PGFGGR 460
Score = 101 (40.6 bits), Expect = 8.2e-12, Sum P(2) = 8.2e-12
Identities = 27/105 (25%), Positives = 44/105 (41%)
Query: 210 RCIKSPQGELVCECRHNTAGKDCEKCKPFFSDRPWGRATVYDANECKGGRCKCNGHASRC 269
+C+ PQG C++ G +K + + + + +E C C+GH+ C
Sbjct: 1496 KCLGCPQGYTGLSCQNPEVGYYRKKHREYLNQAD--DIALIGWSE----PCSCHGHSQTC 1549
Query: 270 IKSPQGALVCECRHNTAGKDCEKCKP-FFSDRPWGRATVYDANEC 313
+P ++ +C HNT G CE C P + D G A C
Sbjct: 1550 --NPDTSVCTDCEHNTFGDFCEHCLPGYIGDAREGGANACTKCAC 1592
Score = 100 (40.3 bits), Expect = 1.0e-11, Sum P(2) = 1.0e-11
Identities = 29/97 (29%), Positives = 38/97 (39%)
Query: 202 CKCNGHAS-RCIKSPQGELVCECRHNTAGKDCEKCKPFFSDRPWGRATVYDANECKGGRC 260
C CN + S K Q CECR N G CEKC +D G + + C+ C
Sbjct: 1036 CHCNIYGSIEDGKCDQTTGKCECRENVEGTMCEKC----AD---GYFNITSGDGCED--C 1086
Query: 261 KCNGHASRCIKSPQGALVCECRHNTAGKDCEKCKPFF 297
C+ S + C C+ G C+ C P F
Sbjct: 1087 GCDPTGSEDVSCNLVTGQCVCKPGVTGLKCDSCLPNF 1123
Score = 95 (38.5 bits), Expect = 3.4e-11, Sum P(2) = 3.4e-11
Identities = 29/102 (28%), Positives = 45/102 (44%)
Query: 202 CKCN--GHAS-RCIKSPQ----GELV--CECRHNTAGKDCEKCKPFFSDRPWGRATVYDA 252
C+C+ G S C++ Q G+ C C+ G+ CE+C P + + P
Sbjct: 423 CECDPVGSVSDACVRDDQSAENGQKPGDCICKPGFGGRRCERCAPGYRNHP--------- 473
Query: 253 NECKGGRCKCNGHASRCIKSPQGALVCECRHNTAGKDCEKCK 294
C+ C CN S + GA C+C+ N G C++CK
Sbjct: 474 -TCEP--CPCNRAGSVNFDTCDGAS-CQCKANVEGIYCDRCK 511
Score = 85 (35.0 bits), Expect = 3.7e-10, Sum P(2) = 3.7e-10
Identities = 30/109 (27%), Positives = 43/109 (39%)
Query: 193 DRHKKQGGR-CKCN--GHASRCIKSPQGELVCECRHNTAGKDCEKCKP-FFSD---RPWG 245
D H G + C C+ G + G+ C+C+ G C+ C FF+ P G
Sbjct: 1171 DYHPLNGCKLCDCSDIGSDGGMCNTFTGQ--CKCKAAYVGLKCDLCTHGFFNFPTCEPCG 1228
Query: 246 -RATVYDANECKGGRCKCNGHASRCIKSPQGALVCECRHNTAGKDCEKC 293
A D +CK G+C CN C C+ N G C++C
Sbjct: 1229 CNAAGTDPLQCKDGQCLCNEIGE-----------CPCKKNVHGTKCDQC 1266
Score = 77 (32.2 bits), Expect = 2.5e-09, Sum P(2) = 2.5e-09
Identities = 26/92 (28%), Positives = 34/92 (36%)
Query: 202 CKCNGHASRCIKSPQGELVCECRHNTAGKDCEKCKPFFSDRPWGRATVYDANECKGGRCK 261
C C+ S + C C+ G C+ C P F +G T EC+ C
Sbjct: 1086 CGCDPTGSEDVSCNLVTGQCVCKPGVTGLKCDSCLPNF----YG-LTSEGCTECEP--CP 1138
Query: 262 CNGHASRCIKSPQGALVCECRHNTAGKDCEKC 293
G I G+ C C NT G+ CE C
Sbjct: 1139 APGQVCDPI---DGS--CVCPPNTVGEMCENC 1165
Score = 77 (32.2 bits), Expect = 2.5e-09, Sum P(2) = 2.5e-09
Identities = 26/103 (25%), Positives = 37/103 (35%)
Query: 201 RCKC----NGHASRCIKSPQGE-LVCE-CRHNTAGKDCEKCKPFFSDRPWGRATVYDANE 254
+C C N + C+ G VC C+ G+ CE C A Y +
Sbjct: 1589 KCACPLVENSFSDSCVAVDHGRGYVCNSCKPGYTGQYCETCV----------AGYYGDPQ 1638
Query: 255 CKGGRCK-CNGHASRCIKSPQGALV--CECRHNTAGKDCEKCK 294
GG C C+ H + L CEC+ G+ C C+
Sbjct: 1639 HIGGTCSPCDCHPDGSLHGACNPLSGQCECKPGVTGRTCSMCQ 1681
Score = 72 (30.4 bits), Expect = 8.1e-09, Sum P(2) = 8.1e-09
Identities = 20/68 (29%), Positives = 28/68 (41%)
Query: 202 CKCNGHASRCIKSPQGELVCECRHNTAGKDCEKCKPFFSDRPWGRATVYDANECKGGRCK 261
C CN S + G C+C+ N G C++CK G + +N C
Sbjct: 478 CPCNRAGSVNFDTCDGAS-CQCKANVEGIYCDRCKA-------GTIHLSASNPLGCQPCF 529
Query: 262 CNGHASRC 269
C GH+S C
Sbjct: 530 CFGHSSTC 537
Score = 71 (30.1 bits), Expect = 1.0e-08, Sum P(2) = 1.0e-08
Identities = 28/99 (28%), Positives = 37/99 (37%)
Query: 221 CECRHNTAGKDCEKCKPFFSDRPWGRATVYDANECKGGRCKCNGHASRCIKSPQGALVCE 280
C C NT G+ CE C + W + N CK C G + G C+
Sbjct: 1151 CVCPPNTVGEMCENC----TTNAWD---YHPLNGCKLCDCSDIGSDGGMCNTFTGQ--CK 1201
Query: 281 CRHNTAGKDCEKCKP-FFSD---RPWG-RATVYDANECK 314
C+ G C+ C FF+ P G A D +CK
Sbjct: 1202 CKAAYVGLKCDLCTHGFFNFPTCEPCGCNAAGTDPLQCK 1240
Score = 42 (19.8 bits), Expect = 9.7e-06, Sum P(2) = 9.7e-06
Identities = 11/38 (28%), Positives = 17/38 (44%)
Query: 200 GRCKC--NGHASRCIKSPQGELVCECRHNTAGKDCEKC 235
G C C N H ++C + +G + N G C +C
Sbjct: 1250 GECPCKKNVHGTKCDQCGEGTFSLDSS-NLKG--CTEC 1284
>UNIPROTKB|F1LX88 [details] [associations]
symbol:Ntng1 "Protein Ntng1" species:10116 "Rattus
norvegicus" [GO:0007409 "axonogenesis" evidence=IEA] [GO:0046658
"anchored to plasma membrane" evidence=IEA] InterPro:IPR000742
PROSITE:PS50026 SMART:SM00181 RGD:1563465 InterPro:IPR013032
PROSITE:PS00022 InterPro:IPR002049 Pfam:PF00053 SMART:SM00180
PROSITE:PS50027 InterPro:IPR008211 Pfam:PF00055 SMART:SM00136
PROSITE:PS51117 IPI:IPI00559428 ProteinModelPortal:F1LX88
Ensembl:ENSRNOT00000043455 ArrayExpress:F1LX88 Uniprot:F1LX88
Length = 401
Score = 206 (77.6 bits), Expect = 1.9e-27, Sum P(2) = 1.9e-27
Identities = 45/112 (40%), Positives = 55/112 (49%)
Query: 197 KQGGRCKCNGHASRCIKSPQGELVCECRHNTAGKDCEKCKPFFSDRPWGRATVYD----- 251
K GRCKCN HA+ C+ +L CEC HNT G DC KCK + RPW +
Sbjct: 210 KVRGRCKCNLHATMCVYD-NSKLTCECEHNTTGPDCGKCKKNYQGRPWSPGSYLPIPKGT 268
Query: 252 ANEC-----KGGRCKCNGHAS---RCIKSPQGALVCECRHNTAGKDCEKCKP 295
AN C G+C CN S RC G+ CEC+ T G C++C P
Sbjct: 269 ANTCIPSISSIGKCYCNPLGSIHDRC----NGSGFCECKTGTTGPKCDECLP 316
Score = 156 (60.0 bits), Expect = 1.9e-27, Sum P(2) = 1.9e-27
Identities = 39/125 (31%), Positives = 61/125 (48%)
Query: 74 CDAGSPRGRFPAEYLTDLNNPSNVTCWRSEAQTSVNSLSASPDNVTLTLSLGKKFELT-Y 132
CDA +P P E + D T W+S P V +TLS K ELT
Sbjct: 10 CDASTPELAHPPELMFDFEGRHPSTFWQSATWKEY----PKPLQVNITLSWSKTIELTDN 65
Query: 133 ISLSFCPKSIKPDSLAIYKSQDFGKSWQPLQFYSSQCKKLYGRTATGV--ISRGNEQEAL 190
I ++F +S +PD + + KS D+G++WQP Q+Y++ C + V +S+ E +
Sbjct: 66 IVITF--ESGRPDQMILEKSLDYGRTWQPYQYYATDCLHAFHMDPKSVKDLSQHTVLEII 123
Query: 191 CTDRH 195
CT+ +
Sbjct: 124 CTEEY 128
Score = 152 (58.6 bits), Expect = 1.8e-20, Sum P(2) = 1.8e-20
Identities = 25/45 (55%), Positives = 28/45 (62%)
Query: 258 GRCKCNGHASRCIKSPQGALVCECRHNTAGKDCEKCKPFFSDRPW 302
GRCKCN HA+ C+ L CEC HNT G DC KCK + RPW
Sbjct: 213 GRCKCNLHATMCVYD-NSKLTCECEHNTTGPDCGKCKKNYQGRPW 256
>UNIPROTKB|F1LU77 [details] [associations]
symbol:F1LU77 "Uncharacterized protein" species:10116
"Rattus norvegicus" [GO:0005102 "receptor binding" evidence=IEA]
[GO:0005606 "laminin-1 complex" evidence=IEA] [GO:0007155 "cell
adhesion" evidence=IEA] [GO:0030155 "regulation of cell adhesion"
evidence=IEA] [GO:0030334 "regulation of cell migration"
evidence=IEA] [GO:0045995 "regulation of embryonic development"
evidence=IEA] InterPro:IPR009254 InterPro:IPR010307 Pfam:PF06008
Pfam:PF06009 GO:GO:0030155 GO:GO:0007155 Gene3D:2.60.120.200
InterPro:IPR008985 InterPro:IPR013320 SUPFAM:SSF49899 GO:GO:0030334
InterPro:IPR002049 InterPro:IPR001791 Pfam:PF00053 Pfam:PF00054
SMART:SM00180 SMART:SM00282 PROSITE:PS01248 PROSITE:PS50027
PROSITE:PS50025 Pfam:PF02210 GO:GO:0045995 InterPro:IPR018031
InterPro:IPR000034 InterPro:IPR008211 Pfam:PF00052 Pfam:PF00055
SMART:SM00281 SMART:SM00136 PROSITE:PS51115 PROSITE:PS51117
GO:GO:0005606 GO:GO:0005610 IPI:IPI00768265
Ensembl:ENSRNOT00000015750 ArrayExpress:F1LU77 Uniprot:F1LU77
Length = 3149
Score = 231 (86.4 bits), Expect = 2.4e-27, Sum P(2) = 2.4e-27
Identities = 50/123 (40%), Positives = 67/123 (54%)
Query: 199 GGRCKCNGHASRC-IKSPQGELVCECRHNTAGKDCEKCKPFFSDRPWGRATVYDANECKG 257
GGRC CNGHA C +P+ + C+C+H+T G C +C ++ RPW A NEC+
Sbjct: 199 GGRCVCNGHAEACSADNPEKQFRCKCQHHTCGDTCNRCCAGYNQRPWRPAAQDQHNECEA 258
Query: 258 GRCKCNGHASRC-----IKSPQGAL----------VC-ECRHNTAGKDCEKC-KPFFSDR 300
C C+GHA C + Q +L VC +C+HNTAG +CEKC K +F R
Sbjct: 259 --CNCHGHAVDCYYDEAVSRQQASLNSKGVYTGGGVCIDCQHNTAGVNCEKCAKGYF--R 314
Query: 301 PWG 303
P G
Sbjct: 315 PHG 317
Score = 158 (60.7 bits), Expect = 9.2e-16, Sum P(2) = 9.2e-16
Identities = 36/102 (35%), Positives = 53/102 (51%)
Query: 202 CKCNGHASRCIKSPQGELVC-ECRHNTAGKDCEKCKPFFSDRPWGRATVYDANECKGGRC 260
C CNGH++RC G VC C+HNTAG+ CE+C+ + +G A ++ + C+ C
Sbjct: 1591 CNCNGHSNRC---QDGSGVCINCQHNTAGEHCERCQEGY----YGSA-IHGS--CRVCPC 1640
Query: 261 K-CNGHASRCIKSPQGALVCECRHNTAGKDCEKCKPFFSDRP 301
N A+ C GA+ C C+ G CE+C P + P
Sbjct: 1641 PHTNSFATGCAVDG-GAVRCACKPGYTGAQCERCAPGYFGNP 1681
Score = 150 (57.9 bits), Expect = 7.7e-15, Sum P(2) = 7.7e-15
Identities = 25/59 (42%), Positives = 34/59 (57%)
Query: 257 GGRCKCNGHASRC-IKSPQGALVCECRHNTAGKDCEKCKPFFSDRPWGRATVYDANECK 314
GGRC CNGHA C +P+ C+C+H+T G C +C ++ RPW A NEC+
Sbjct: 199 GGRCVCNGHAEACSADNPEKQFRCKCQHHTCGDTCNRCCAGYNQRPWRPAAQDQHNECE 257
Score = 143 (55.4 bits), Expect = 4.9e-14, Sum P(2) = 4.9e-14
Identities = 33/91 (36%), Positives = 47/91 (51%)
Query: 208 ASRCIKSPQGELV--CECRHNTAGKDCEKCKP-FFSDRPWGRATVYDANECKGGRCKCNG 264
AS P+ LV C C + G C+ C+P ++ D + A C C CNG
Sbjct: 1543 ASDTGSGPRAHLVEMCTCPPDYTGDSCQGCRPGYYRD-----IKSFPAGRCVP--CNCNG 1595
Query: 265 HASRCIKSPQGALVC-ECRHNTAGKDCEKCK 294
H++RC G+ VC C+HNTAG+ CE+C+
Sbjct: 1596 HSNRC---QDGSGVCINCQHNTAGEHCERCQ 1623
Score = 133 (51.9 bits), Expect = 6.6e-13, Sum P(2) = 6.6e-13
Identities = 42/127 (33%), Positives = 59/127 (46%)
Query: 193 DRHKKQGGRCKCNGHASRC-----IKSPQGEL----------VC-ECRHNTAGKDCEKC- 235
D+H + C C+GHA C + Q L VC +C+HNTAG +CEKC
Sbjct: 251 DQHNECEA-CNCHGHAVDCYYDEAVSRQQASLNSKGVYTGGGVCIDCQHNTAGVNCEKCA 309
Query: 236 KPFFSDRPWGRATVYDANECKGGRCKCNGHASRCIKSPQGALVCECRHNTAGKDCEKCKP 295
K +F RP G V + C C C+ R + QG+ C C+ N +G CE C
Sbjct: 310 KGYF--RPHG-VPVEALHGCIP--CSCD--PDRADECDQGSGRCHCKPNFSGDFCETCAD 362
Query: 296 FFSDRPW 302
+ + P+
Sbjct: 363 GYYNFPF 369
Score = 127 (49.8 bits), Expect = 2.4e-27, Sum P(2) = 2.4e-27
Identities = 34/130 (26%), Positives = 61/130 (46%)
Query: 71 CHVCDAGSPRGRFPAEYLTDLNNPSNVTCWRSEAQTSVNSLSASPDNVTLTLSLGKKFEL 130
C C++ R PA + D + W+S +S + V LTL LG+ F +
Sbjct: 5 CDYCNSEDSRKAHPAIHAID----GSERWWQSPPLSS----GTQYNKVNLTLDLGQLFHV 56
Query: 131 TYISLSFCPKSIKPDSLAIYKSQDFGKSWQPLQFYS---SQCKKLYGRTATGVISRGNEQ 187
YI + F S +PD + +S DFG ++ P Q+++ C + +G+ A ++R +
Sbjct: 57 AYILIKFA-NSPRPDLWVLERSVDFGNTYSPWQYFAHSRGDCLQQFGQEANMAVTR--DD 113
Query: 188 EALCTDRHKK 197
+ LC + +
Sbjct: 114 QVLCVTEYSR 123
Score = 95 (38.5 bits), Expect = 6.3e-09, Sum P(2) = 6.3e-09
Identities = 28/101 (27%), Positives = 39/101 (38%)
Query: 221 CECRHNTAGKDCEKCKPFFSDRPWGRATVYDANECKGGRCKCNGHASRCIKSPQGALVCE 280
C C+ G+ C+KC P F Y EC C CN + G C
Sbjct: 1282 CRCKPRVTGQQCDKCAPGF----------YHFPECVP--CSCNRDGTEPGVCDPGTGACM 1329
Query: 281 CRHNTAGKDCEKCKP--FFSD--RPWG--RATVYDAN-ECK 314
C+ N G C+ C+ F+ D P G R + N +C+
Sbjct: 1330 CKENVEGPQCQFCREGSFYLDSANPEGCTRCFCFGVNTDCR 1370
Score = 94 (38.1 bits), Expect = 8.0e-09, Sum P(2) = 8.0e-09
Identities = 24/94 (25%), Positives = 42/94 (44%)
Query: 202 CKCN--GHASRCIKSPQGELVCECRHNTAGKDCEKCKP-FFSDRPWGRATVYDANECKGG 258
C+C+ G S + Q + C C+ + G C+ C +FS ++ + C+G
Sbjct: 534 CQCHEAGTVSGIGECGQEDGDCSCKAHVTGDACDTCADGYFSLE---KSNYFG---CQGC 587
Query: 259 RCKCNGHASRCIKSPQGALVCECRHNTAGKDCEK 292
+C G + P G C+CR + GK C++
Sbjct: 588 QCDIGGALTTMCSGPSGE--CQCREHIEGKQCQR 619
Score = 85 (35.0 bits), Expect = 6.7e-08, Sum P(2) = 6.7e-08
Identities = 22/95 (23%), Positives = 37/95 (38%)
Query: 202 CKC---NGHASRCIKSPQGELVCECRHNTAGKDCEKCKPFFSDRPWGRATVYDANECKGG 258
C C N A+ C G + C C+ G CE+C P + +G + + C+
Sbjct: 1638 CPCPHTNSFATGCAVDG-GAVRCACKPGYTGAQCERCAPGY----FGNPQKFGGS-CQPC 1691
Query: 259 RCKCNGHASRCIKSPQGALVCECRHNTAGKDCEKC 293
C NG C + E + + ++C+ C
Sbjct: 1692 NCNSNGQFGTCDPLTGDCVSQEPKDGSPAEECDDC 1726
Score = 85 (35.0 bits), Expect = 6.7e-08, Sum P(2) = 6.7e-08
Identities = 26/101 (25%), Positives = 40/101 (39%)
Query: 204 CNGHASRCIKSPQGEL-----VCECRHNTAGKDCEKCKPFFSDRPWGRATVYDANECKGG 258
C G +S C P G + C+C+ + C CKP + D + +EC+
Sbjct: 482 CQGSSSVC--DPAGTMDSSLGYCQCKLHVTSPTCSVCKPLYWDL--AKENPRGCSECQ-- 535
Query: 259 RCKCNGHASRCIKSPQGALVCECRHNTAGKDCEKCKP-FFS 298
C G S + Q C C+ + G C+ C +FS
Sbjct: 536 -CHEAGTVSGIGECGQEDGDCSCKAHVTGDACDTCADGYFS 575
Score = 85 (35.0 bits), Expect = 6.7e-08, Sum P(2) = 6.7e-08
Identities = 23/98 (23%), Positives = 38/98 (38%)
Query: 202 CKCNGHASRCIKSPQGELVCECRHNTAGKDCEKCKPFFSDRPWGRATVYDANECKGGRCK 261
C+C+ S + CEC G+ C++C + YD C+G
Sbjct: 439 CQCSTSGSYPVPCDPETGQCECLPGVTGRRCDRCL----------SGAYDFPYCQGSSSV 488
Query: 262 CNGHASRCIKSPQGALVCECRHNTAGKDCEKCKPFFSD 299
C+ + + S G C+C+ + C CKP + D
Sbjct: 489 CDPAGT--MDSSLG--YCQCKLHVTSPTCSVCKPLYWD 522
Score = 74 (31.1 bits), Expect = 9.0e-07, Sum P(2) = 9.0e-07
Identities = 23/91 (25%), Positives = 35/91 (38%)
Query: 221 CECRHNTAGKDCEKCKPFFSDRPWGRATVYDANECKGGRCKCNGHASRCIKSPQGALVCE 280
C CR G C+ C R+ Y C+ C+C+ S + CE
Sbjct: 412 CLCRPGVEGPRCDSC----------RSGSYSFPICQA--CQCSTSGSYPVPCDPETGQCE 459
Query: 281 CRHNTAGKDCEKCKPFFSDRPW--GRATVYD 309
C G+ C++C D P+ G ++V D
Sbjct: 460 CLPGVTGRRCDRCLSGAYDFPYCQGSSSVCD 490
Score = 72 (30.4 bits), Expect = 2.5e-07, Sum P(3) = 2.5e-07
Identities = 13/37 (35%), Positives = 19/37 (51%)
Query: 198 QGGRCKCNGHASRCIKSPQGELVCECRHNTAGKDCEK 234
QG +C G + P GE C+CR + GK C++
Sbjct: 585 QGCQCDIGGALTTMCSGPSGE--CQCREHIEGKQCQR 619
Score = 61 (26.5 bits), Expect = 3.1e-06, Sum P(3) = 3.1e-06
Identities = 17/62 (27%), Positives = 25/62 (40%)
Query: 202 CKCNGHASRCIKSPQGELVCECRHNTAGKDCEKCKP--FFSD--RPWG--RATVYDAN-E 254
C CN + G C C+ N G C+ C+ F+ D P G R + N +
Sbjct: 1309 CSCNRDGTEPGVCDPGTGACMCKENVEGPQCQFCREGSFYLDSANPEGCTRCFCFGVNTD 1368
Query: 255 CK 256
C+
Sbjct: 1369 CR 1370
Score = 60 (26.2 bits), Expect = 2.4e-05, Sum P(2) = 2.4e-05
Identities = 30/101 (29%), Positives = 36/101 (35%)
Query: 200 GRCKCNGHASRCIKSPQGELVCECRHNTAGKDCEKCKPFFSDRPWG----RATVYDANEC 255
G CK N S G + CEC H AG C P P G + + +
Sbjct: 1152 GFCK-NSARSLVAFYHNGAVPCEC-H-PAGAAVHHCSPE-GGAPAGPTSSEGSAHAVQQY 1207
Query: 256 KG-GRCK-CNGHASRCIKSPQGALVCECRHNTAGKDCEKCK 294
G CK CN C + G C C NT CE C+
Sbjct: 1208 YGFPHCKPCNCGRRLC-EEVTGK--CLCPPNTVRPQCEVCE 1245
Score = 52 (23.4 bits), Expect = 2.5e-07, Sum P(3) = 2.5e-07
Identities = 16/52 (30%), Positives = 23/52 (44%)
Query: 266 ASRCIKSPQGALV--CECRHNTAGKDCEKCKP-FFSDR---PWGRATVYDAN 311
AS P+ LV C C + G C+ C+P ++ D P GR + N
Sbjct: 1543 ASDTGSGPRAHLVEMCTCPPDYTGDSCQGCRPGYYRDIKSFPAGRCVPCNCN 1594
>UNIPROTKB|F1NI05 [details] [associations]
symbol:LAMC1 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0005201 "extracellular matrix structural constituent"
evidence=IEA] [GO:0006461 "protein complex assembly" evidence=IEA]
[GO:0016477 "cell migration" evidence=IEA] [GO:0022617
"extracellular matrix disassembly" evidence=IEA] [GO:0031175
"neuron projection development" evidence=IEA] [GO:0031581
"hemidesmosome assembly" evidence=IEA] [GO:0034446 "substrate
adhesion-dependent cell spreading" evidence=IEA] [GO:0043208
"glycosphingolipid binding" evidence=IEA] [GO:0043259 "laminin-10
complex" evidence=IEA] GO:GO:0016477 GO:GO:0006461 GO:GO:0007155
InterPro:IPR002049 Pfam:PF00053 SMART:SM00180 PROSITE:PS01248
PROSITE:PS50027 GO:GO:0031581 GO:GO:0022617 GO:GO:0005201
GO:GO:0043208 InterPro:IPR018031 InterPro:IPR000034
InterPro:IPR008211 Pfam:PF00052 Pfam:PF00055 SMART:SM00281
PROSITE:PS51115 PROSITE:PS51117 GeneTree:ENSGT00690000102103
GO:GO:0043259 EMBL:AADN02034183 EMBL:AADN02034182 IPI:IPI00822825
Ensembl:ENSGALT00000039414 ArrayExpress:F1NI05 Uniprot:F1NI05
Length = 1007
Score = 316 (116.3 bits), Expect = 4.2e-27, P = 4.2e-27
Identities = 57/106 (53%), Positives = 66/106 (62%)
Query: 199 GGRCKCNGHASRCIKSPQGELVCECRHNTAGKDCEKCKPFFSDRPWGRATVYDANECKGG 258
GGRCKCNGHAS CI++ G+LVC C+HNT G DCEKC PFF+DRPW RAT ANEC
Sbjct: 38 GGRCKCNGHASECIRNELGKLVCNCKHNTFGDDCEKCLPFFNDRPWRRATAESANECLP- 96
Query: 259 RCKCNGHASRCIKSPQ-------GALVCECRHNTAGKDCEKCKPFF 297
C CNG + C P+ G CR NT G CE+C+ F
Sbjct: 97 -CDCNGRSQECYFDPELYRSTGHGGHCMGCRDNTDGAHCERCRDSF 141
Score = 251 (93.4 bits), Expect = 3.7e-20, P = 3.7e-20
Identities = 41/57 (71%), Positives = 45/57 (78%)
Query: 257 GGRCKCNGHASRCIKSPQGALVCECRHNTAGKDCEKCKPFFSDRPWGRATVYDANEC 313
GGRCKCNGHAS CI++ G LVC C+HNT G DCEKC PFF+DRPW RAT ANEC
Sbjct: 38 GGRCKCNGHASECIRNELGKLVCNCKHNTFGDDCEKCLPFFNDRPWRRATAESANEC 94
Score = 175 (66.7 bits), Expect = 3.7e-10, P = 3.7e-10
Identities = 42/104 (40%), Positives = 54/104 (51%)
Query: 202 CKCNGHASRCIKSPQGELVCECRHNTAGKDCEKCKPFFSDRPWGRATVYDANECKGGRCK 261
C CNGH+ C P+ + C+CR NTAG CEKC SD +G AT A +C+ C
Sbjct: 479 CTCNGHSETC--DPETGM-CDCRDNTAGSHCEKC----SDGYYGDATAGTALDCQP--CP 529
Query: 262 CNGHASRCIKSPQGALVC-ECRHNTAGKDCEKCKP-FFSDRPWG 303
C G +S + +VC C+ T GK CE C +F D P G
Sbjct: 530 CPGGSSCAVVPRTKEVVCTSCQTGTTGKRCELCDDAYFGD-PLG 572
Score = 144 (55.7 bits), Expect = 1.2e-06, P = 1.2e-06
Identities = 35/94 (37%), Positives = 46/94 (48%)
Query: 221 CECRHNTAGKDCEKCKPFFSDRPWGRATVYDANECKGGRCKCNGHASRCIKSPQGALVCE 280
C C G+ CE+C P + G Y + C C CNGH+ C P+ + C+
Sbjct: 445 CSCPAGYEGQFCERCSPGYRRETPGLGP-Y--SPCVP--CTCNGHSETC--DPETGM-CD 496
Query: 281 CRHNTAGKDCEKCKPFFSDRPWGRATVYDANECK 314
CR NTAG CEKC SD +G AT A +C+
Sbjct: 497 CRDNTAGSHCEKC----SDGYYGDATAGTALDCQ 526
Score = 121 (47.7 bits), Expect = 0.00042, P = 0.00042
Identities = 33/108 (30%), Positives = 50/108 (46%)
Query: 202 CKCNGH-----ASRCIKSPQGELVCECRHNTAGKDCEKCKPFFSDRPWGRATVYDANECK 256
C+CN + C + GE + +C +NTAG C++CK F P AT A++C+
Sbjct: 583 CQCNDNIDPNAVGNCNRQT-GECL-KCIYNTAGFYCDRCKDGFFGNPL--AT-NPADKCR 637
Query: 257 GGRCKCNGHASRCIKSPQGALVCECRHNTAGKDCEKCKPFFSDRPWGR 304
C G ++ Q CEC + +DC C+P F + GR
Sbjct: 638 ACHCNPYGTVNQQTSCNQVTGQCECLSHVTERDCSACEPGFFNLQSGR 685
>UNIPROTKB|Q16787 [details] [associations]
symbol:LAMA3 "Laminin subunit alpha-3" species:9606 "Homo
sapiens" [GO:0005102 "receptor binding" evidence=IEA] [GO:0005606
"laminin-1 complex" evidence=IEA] [GO:0030155 "regulation of cell
adhesion" evidence=IEA] [GO:0030334 "regulation of cell migration"
evidence=IEA] [GO:0045995 "regulation of embryonic development"
evidence=IEA] [GO:0007155 "cell adhesion" evidence=IEA] [GO:0005610
"laminin-5 complex" evidence=IEA] [GO:0008544 "epidermis
development" evidence=TAS] [GO:0005198 "structural molecule
activity" evidence=NAS] [GO:0005604 "basement membrane"
evidence=TAS] [GO:0005576 "extracellular region" evidence=TAS]
[GO:0031581 "hemidesmosome assembly" evidence=TAS] [GO:0034329
"cell junction assembly" evidence=TAS] InterPro:IPR009254
InterPro:IPR010307 Pfam:PF06008 Pfam:PF06009 Reactome:REACT_118779
Pathway_Interaction_DB:a6b1_a6b4_integrin_pathway
Reactome:REACT_111102 GO:GO:0030155 GO:GO:0005198
Pathway_Interaction_DB:syndecan_2_pathway GO:GO:0007155
InterPro:IPR013032 PROSITE:PS00022 Gene3D:2.60.120.200
InterPro:IPR008985 InterPro:IPR013320 SUPFAM:SSF49899 GO:GO:0030334
Reactome:REACT_111155 Pathway_Interaction_DB:syndecan_4_pathway
PROSITE:PS01186 InterPro:IPR002049 InterPro:IPR001791 Pfam:PF00053
SMART:SM00180 SMART:SM00282 PROSITE:PS01248 PROSITE:PS50027
PROSITE:PS50025 Pathway_Interaction_DB:amb2_neutrophils_pathway
GO:GO:0008544 GO:GO:0005604 DrugBank:DB00009 DrugBank:DB00029
DrugBank:DB00031 InterPro:IPR009030 SUPFAM:SSF57184 Pfam:PF02210
GO:GO:0031581 DrugBank:DB00015 GO:GO:0045995 Orphanet:79402
eggNOG:NOG292643 InterPro:IPR018031 InterPro:IPR000034
InterPro:IPR008211 Pfam:PF00052 Pfam:PF00055 SMART:SM00281
SMART:SM00136 PROSITE:PS51115 PROSITE:PS51117 GO:GO:0005606
EMBL:L34155 EMBL:AY327115 EMBL:AY327116 EMBL:AB107369 EMBL:AC010754
EMBL:AC067796 EMBL:AC090366 EMBL:X85107 EMBL:X85108 EMBL:X84900
IPI:IPI00377045 IPI:IPI00743994 IPI:IPI00790908 PIR:A55347
RefSeq:NP_000218.2 RefSeq:NP_001121189.1 RefSeq:NP_937762.1
UniGene:Hs.436367 ProteinModelPortal:Q16787 SMR:Q16787
IntAct:Q16787 MINT:MINT-1431248 STRING:Q16787 PhosphoSite:Q16787
DMDM:215274012 PaxDb:Q16787 PRIDE:Q16787 DNASU:3909
Ensembl:ENST00000313654 Ensembl:ENST00000399516 GeneID:3909
KEGG:hsa:3909 UCSC:uc002kuq.3 CTD:3909 GeneCards:GC18P021269
HGNC:HGNC:6483 HPA:CAB010757 HPA:HPA009309 MIM:226700 MIM:245660
MIM:600805 neXtProt:NX_Q16787 Orphanet:79404 Orphanet:2407
PharmGKB:PA30272 HOGENOM:HOG000231235 HOVERGEN:HBG052300 KO:K06240
OMA:DSCQGCS OrthoDB:EOG4FBHS0 ChiTaRS:LAMA3 GenomeRNAi:3909
NextBio:15345 PMAP-CutDB:Q6VU68 ArrayExpress:Q16787 Bgee:Q16787
CleanEx:HS_LAMA3 Genevestigator:Q16787 GermOnline:ENSG00000053747
GO:GO:0005610 Uniprot:Q16787
Length = 3333
Score = 229 (85.7 bits), Expect = 5.7e-27, Sum P(2) = 5.7e-27
Identities = 49/123 (39%), Positives = 70/123 (56%)
Query: 199 GGRCKCNGHASRC-IKSPQGELVCECRHNTAGKDCEKCKPFFSDRPWGRATVYDANECKG 257
GG+C CNGHA C I +P+ CEC+H+T G+ C++C ++ R W A ++EC+
Sbjct: 296 GGQCVCNGHAEVCNINNPEKLFRCECQHHTCGETCDRCCTGYNQRRWRPAAWEQSHECEA 355
Query: 258 GRCKCNGHASRCIKSP-----QGAL----------VC-ECRHNTAGKDCEKC-KPFFSDR 300
C C+GHAS C P Q +L VC C+HNTAG +CE+C K ++ R
Sbjct: 356 --CNCHGHASNCYYDPDVERQQASLNTQGIYAGGGVCINCQHNTAGVNCEQCAKGYY--R 411
Query: 301 PWG 303
P+G
Sbjct: 412 PYG 414
Score = 158 (60.7 bits), Expect = 1.5e-16, Sum P(2) = 1.5e-16
Identities = 34/102 (33%), Positives = 54/102 (52%)
Query: 202 CKCNGHASRCIKSPQGELVC-ECRHNTAGKDCEKCKPFFSDRPWGRATVYDANECKGGRC 260
C CNGH+++C G +C C+HNTAG+ CE+C+ + +G A V+ + C+ C
Sbjct: 1687 CNCNGHSNQC---QDGSGICVNCQHNTAGEHCERCQEGY----YGNA-VHGS--CRACPC 1736
Query: 261 K-CNGHASRCIKSPQGALVCECRHNTAGKDCEKCKPFFSDRP 301
N A+ C+ + G + C C+ G CE+C P + P
Sbjct: 1737 PHTNSFATGCVVNG-GDVRCSCKAGYTGTQCERCAPGYFGNP 1777
Score = 150 (57.9 bits), Expect = 9.7e-07, P = 9.7e-07
Identities = 50/144 (34%), Positives = 66/144 (45%)
Query: 169 CKKLYGRTATGVISRGNEQEALCTDRHKKQGGRCKCNGHASRCIKSP-----QGEL---- 219
C + R TG R + A H+ + C C+GHAS C P Q L
Sbjct: 326 CGETCDRCCTGYNQR-RWRPAAWEQSHECEA--CNCHGHASNCYYDPDVERQQASLNTQG 382
Query: 220 ------VC-ECRHNTAGKDCEKC-KPFFSDRPWGRATVYDANE-CKGGRCKCNG-HASRC 269
VC C+HNTAG +CE+C K ++ RP+G DA + C C C+ HA C
Sbjct: 383 IYAGGGVCINCQHNTAGVNCEQCAKGYY--RPYG--VPVDAPDGCIP--CSCDPEHADGC 436
Query: 270 IKSPQGALVCECRHNTAGKDCEKC 293
QG+ C C+ N G +CEKC
Sbjct: 437 ---EQGSGRCHCKPNFHGDNCEKC 457
Score = 147 (56.8 bits), Expect = 2.8e-15, Sum P(2) = 2.8e-15
Identities = 24/59 (40%), Positives = 37/59 (62%)
Query: 257 GGRCKCNGHASRC-IKSPQGALVCECRHNTAGKDCEKCKPFFSDRPWGRATVYDANECK 314
GG+C CNGHA C I +P+ CEC+H+T G+ C++C ++ R W A ++EC+
Sbjct: 296 GGQCVCNGHAEVCNINNPEKLFRCECQHHTCGETCDRCCTGYNQRRWRPAAWEQSHECE 354
Score = 135 (52.6 bits), Expect = 5.7e-27, Sum P(2) = 5.7e-27
Identities = 36/130 (27%), Positives = 60/130 (46%)
Query: 71 CHVCDAGSPRGRFPAEYLTDLNNPSNVTCWRSEAQTSVNSLSASPDNVTLTLSLGKKFEL 130
C C++ PR P D + W+S +S + V LTL LG+ F +
Sbjct: 102 CDYCNSEDPRKAHPVTNAID----GSERWWQSPPLSS----GTQYNRVNLTLDLGQLFHV 153
Query: 131 TYISLSFCPKSIKPDSLAIYKSQDFGKSWQPLQFYSSQ---CKKLYGRTATGVISRGNEQ 187
YI + F S +PD + +S DFG ++ P Q+++ C K +GR A ++R +
Sbjct: 154 AYILIKFA-NSPRPDLWVLERSVDFGSTYSPWQYFAHSKVDCLKEFGREANMAVTR--DD 210
Query: 188 EALCTDRHKK 197
+ LC + +
Sbjct: 211 DVLCVTEYSR 220
Score = 131 (51.2 bits), Expect = 1.7e-13, Sum P(2) = 1.7e-13
Identities = 28/77 (36%), Positives = 41/77 (53%)
Query: 220 VCECRHNTAGKDCEKCKP-FFSDRPWGRATVYDANECKGGRCKCNGHASRCIKSPQGALV 278
+C C AG C+ C P ++ D G T C C CNGH+++C G+ +
Sbjct: 1653 ICACPPAYAGDSCQGCSPGYYRDHK-GLYT----GRCVP--CNCNGHSNQC---QDGSGI 1702
Query: 279 C-ECRHNTAGKDCEKCK 294
C C+HNTAG+ CE+C+
Sbjct: 1703 CVNCQHNTAGEHCERCQ 1719
Score = 119 (46.9 bits), Expect = 3.0e-12, Sum P(2) = 3.0e-12
Identities = 29/104 (27%), Positives = 48/104 (46%)
Query: 193 DRHKKQG-GRCKCN--GHASRCIKSPQGELVCECRHNTAGKDCEKCKP-FFSDRPWGRAT 248
D+ G CKC+ G S + QG+ C C+ + G C+ C+ +F+ ++
Sbjct: 621 DKENPSGCSECKCHKAGTVSGTGECRQGDGDCHCKSHVGGDSCDTCEDGYFALE---KSN 677
Query: 249 VYDANECKGGRCKCNGHASRCIKSPQGALVCECRHNTAGKDCEK 292
+ C+G +C G S P G VC+CR + GK C++
Sbjct: 678 YFG---CQGCQCDIGGALSSMCSGPSG--VCQCREHVVGKVCQR 716
Score = 97 (39.2 bits), Expect = 5.7e-10, Sum P(2) = 5.7e-10
Identities = 27/99 (27%), Positives = 40/99 (40%)
Query: 204 CNGHASRCIKSPQGEL-----VCECRHNTAGKDCEKCKPFFSDRPWGRATVYDANECKG- 257
C G +S C P G + C+C+ + G C +CK + W D G
Sbjct: 579 CQGSSSAC--DPAGTINSNLGYCQCKLHVEGPTCSRCKLLY----WN----LDKENPSGC 628
Query: 258 GRCKCN--GHASRCIKSPQGALVCECRHNTAGKDCEKCK 294
CKC+ G S + QG C C+ + G C+ C+
Sbjct: 629 SECKCHKAGTVSGTGECRQGDGDCHCKSHVGGDSCDTCE 667
Score = 95 (38.5 bits), Expect = 9.1e-10, Sum P(2) = 9.1e-10
Identities = 22/95 (23%), Positives = 41/95 (43%)
Query: 202 CKC---NGHASRCIKSPQGELVCECRHNTAGKDCEKCKPFFSDRPWGRATVYDANECKGG 258
C C N A+ C+ + G++ C C+ G CE+C P + +G + + C+
Sbjct: 1734 CPCPHTNSFATGCVVNG-GDVRCSCKAGYTGTQCERCAPGY----FGNPQKFGGS-CQPC 1787
Query: 259 RCKCNGHASRCIKSPQGALVCECRHNTAGKDCEKC 293
C NG C + E + ++ ++C+ C
Sbjct: 1788 SCNSNGQLGSCHPLTGDCINQEPKDSSPAEECDDC 1822
Score = 90 (36.7 bits), Expect = 3.0e-09, Sum P(2) = 3.0e-09
Identities = 32/112 (28%), Positives = 43/112 (38%)
Query: 202 CKCNG-HASRCIKSPQGELVCECRHNTAGKDCEKCKPFFSDRPWG-RATVYD-------- 251
C C+ HA C QG C C+ N G +CEKC + + P+ R ++
Sbjct: 426 CSCDPEHADGC---EQGSGRCHCKPNFHGDNCEKCAIGYYNFPFCLRIPIFPVSTPSSED 482
Query: 252 --ANECKGGRCKCNGHASRCIKSPQGALVCECRHNTAGKDCEKCKPFFSDRP 301
A + KG C G I G C CR G C+ C+ F P
Sbjct: 483 PVAGDIKGCDCNLEGVLPE-ICDAHGR--CLCRPGVEGPRCDTCRSGFYSFP 531
Score = 80 (33.2 bits), Expect = 3.2e-08, Sum P(2) = 3.2e-08
Identities = 19/74 (25%), Positives = 27/74 (36%)
Query: 221 CECRHNTAGKDCEKCKPFFSDRPWGRATVYDANECKGGRCKCNGHASRCIKSPQGALVCE 280
C C+ G+ C++C F Y EC C CN + G C
Sbjct: 1378 CRCKPRITGRQCDRCASGF----------YRFPECVP--CNCNRDGTEPGVCDPGTGACL 1425
Query: 281 CRHNTAGKDCEKCK 294
C+ N G +C C+
Sbjct: 1426 CKENVEGTECNVCR 1439
Score = 77 (32.2 bits), Expect = 6.5e-08, Sum P(2) = 6.5e-08
Identities = 24/99 (24%), Positives = 36/99 (36%)
Query: 201 RCKCNGHASRCIKSPQGELVCECRHNTAGKDCEKCKPF-FSDRPWGRATVYDANECKGGR 259
RCK R + G+ C C T CE C+ FS P C+G
Sbjct: 1308 RCKPCSCGRRLCEEMTGQ--CRCPPRTVRPQCEVCETHSFSFHPMAG--------CEGCN 1357
Query: 260 CKCNGHASRCI-KSPQGALVCECRHNTAGKDCEKCKPFF 297
C G + + + + C C+ G+ C++C F
Sbjct: 1358 CSRRGTIEAAMPECDRDSGQCRCKPRITGRQCDRCASGF 1396
Score = 72 (30.4 bits), Expect = 2.1e-07, Sum P(2) = 2.1e-07
Identities = 20/73 (27%), Positives = 26/73 (35%)
Query: 221 CECRHNTAGKDCEKCKPFFSDRPWGRATVYDANECKGGRCKCNGHASRCIKSPQGALVCE 280
C CR G C+ C+ F Y C+ C G S G CE
Sbjct: 509 CLCRPGVEGPRCDTCRSGF----------YSFPICQACWCSALGSYQMPCSSVTGQ--CE 556
Query: 281 CRHNTAGKDCEKC 293
CR G+ C++C
Sbjct: 557 CRPGVTGQRCDRC 569
Score = 61 (26.5 bits), Expect = 2.8e-06, Sum P(2) = 2.8e-06
Identities = 20/80 (25%), Positives = 31/80 (38%)
Query: 218 ELVCECRHNTAGKDCEKCKPFFSDRPWGRATVYDANECKGGR-CKCNGHAS---RCIKSP 273
E + C N+ D + F + Y KG C+C+ + C SP
Sbjct: 1227 EFITNCGKNSFYLDPQTASRFCKNSARSLVAFYH----KGALPCECHPTGATGPHC--SP 1280
Query: 274 QGALVCECRHNTAGKDCEKC 293
+G C C+ N G+ C +C
Sbjct: 1281 EGGQ-CPCQPNVIGRQCTRC 1299
Score = 58 (25.5 bits), Expect = 2.4e-06, Sum P(3) = 2.4e-06
Identities = 10/35 (28%), Positives = 14/35 (40%)
Query: 202 CKCNGHASRCIKSPQGELVCECRHNTAGKDCEKCK 236
C CN + G C C+ N G +C C+
Sbjct: 1405 CNCNRDGTEPGVCDPGTGACLCKENVEGTECNVCR 1439
Score = 48 (22.0 bits), Expect = 2.4e-06, Sum P(3) = 2.4e-06
Identities = 8/23 (34%), Positives = 12/23 (52%)
Query: 278 VCECRHNTAGKDCEKCKP-FFSD 299
+C C AG C+ C P ++ D
Sbjct: 1653 ICACPPAYAGDSCQGCSPGYYRD 1675
>UNIPROTKB|F1P4B9 [details] [associations]
symbol:NTN4 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0005576 "extracellular region" evidence=IEA]
InterPro:IPR001134 PROSITE:PS50189 GO:GO:0005576 InterPro:IPR002049
InterPro:IPR008993 Pfam:PF00053 SMART:SM00180 SUPFAM:SSF50242
PROSITE:PS01248 PROSITE:PS50027 InterPro:IPR018933 Pfam:PF01759
SMART:SM00643 InterPro:IPR008211 Pfam:PF00055 SMART:SM00136
PROSITE:PS51117 GeneTree:ENSGT00700000104042 EMBL:AADN02005946
EMBL:AADN02005947 EMBL:AADN02005948 EMBL:AADN02005949
EMBL:AADN02005950 IPI:IPI00810572 Ensembl:ENSGALT00000018614
ArrayExpress:F1P4B9 Uniprot:F1P4B9
Length = 551
Score = 214 (80.4 bits), Expect = 1.7e-26, Sum P(2) = 1.7e-26
Identities = 49/124 (39%), Positives = 63/124 (50%)
Query: 200 GRCKCNGHASRCIK----SP---QG--ELV---CECRHNTAGKDCEKCKPFFSDRPWGRA 247
G C CNGHA C+ P G +V C C+HNTAG C+ C P ++DRPW A
Sbjct: 193 GSCFCNGHADHCVPVRGFRPVRAAGAFHVVHGKCMCKHNTAGPHCQHCAPLYNDRPWQAA 252
Query: 248 TVYDA--NECKGGRCKCNGHASRC--------IKSPQGALVCE-CRHNTAGKDCEKCKP- 295
EC+ CKCNGHA C + VC+ C+HNT G+ C++CKP
Sbjct: 253 DGKTGAPRECQS--CKCNGHADTCHFDMDAWLASGNRSGGVCDNCQHNTEGQHCQRCKPG 310
Query: 296 FFSD 299
F+ D
Sbjct: 311 FYRD 314
Score = 142 (55.0 bits), Expect = 1.7e-26, Sum P(2) = 1.7e-26
Identities = 47/172 (27%), Positives = 80/172 (46%)
Query: 35 RRCIPDFVNAAFGQEVKVNSVCGLESPERYC----DTSGACH--VCD--AGSPRG-RFPA 85
+ C P N A G+ ++ + CG + E +C D + C C +G+ G P
Sbjct: 1 KACNPRLGNLAHGRTLRTETACGSHAAEPFCAYAEDATLRCKPPTCGHCSGAHAGLAHPP 60
Query: 86 EYLTDLNNPSNV--TCWRSEAQTSVNSLSASPDNVTLTLSLGKKFELTYISLSFCPKSIK 143
+ D +P + T W++ +P T+ L L F T++ L F KS +
Sbjct: 61 AAMAD--SPFRLPRTWWQAAGD--------APQE-TIQLDLEATFYFTHLILVF--KSPR 107
Query: 144 PDSLAIYKSQDFGKSWQPLQFYSSQCKKLYGRTATGVISRGNEQEALCTDRH 195
P ++ + +SQDFGK+WQ +++++ C +G V+ RG A CT R+
Sbjct: 108 PAAMVLERSQDFGKTWQAYKYFATNCSATFG-LEDDVVRRG----APCTSRY 154
Score = 139 (54.0 bits), Expect = 5.7e-17, Sum P(2) = 5.7e-17
Identities = 42/122 (34%), Positives = 55/122 (45%)
Query: 202 CKCNGHASRCIKSPQGEL--------VCE-CRHNTAGKDCEKCKP-FFSD--RPWGRATV 249
CKCNGHA C L VC+ C+HNT G+ C++CKP F+ D +P+
Sbjct: 265 CKCNGHADTCHFDMDAWLASGNRSGGVCDNCQHNTEGQHCQRCKPGFYRDLRKPFSAP-- 322
Query: 250 YDANECKGGRCKCNGHAS-----RCIKSPQGALVCECRHNTAGKDCEKCKPFFSDRPWGR 304
DA CK C G A+ R P C C+ AG C++C P + WG
Sbjct: 323 -DA--CKPCSCHPLGSAALPLGPRTFCDPSTG-DCPCKPGVAGPRCDRCLPGY----WGF 374
Query: 305 AT 306
T
Sbjct: 375 GT 376
Score = 129 (50.5 bits), Expect = 6.3e-16, Sum P(2) = 6.3e-16
Identities = 32/92 (34%), Positives = 42/92 (45%)
Query: 227 TAGKDCEKCKPFFSDRPWGRATVYDANE-CKGGRCKCNGHASRCIK----SP---QGAL- 277
T G++ + C + P A Y + G C CNGHA C+ P GA
Sbjct: 161 TGGEERQSCPCHPLEPPALPAPYYAVYDFIVKGSCFCNGHADHCVPVRGFRPVRAAGAFH 220
Query: 278 ----VCECRHNTAGKDCEKCKPFFSDRPWGRA 305
C C+HNTAG C+ C P ++DRPW A
Sbjct: 221 VVHGKCMCKHNTAGPHCQHCAPLYNDRPWQAA 252
>UNIPROTKB|F1NZZ2 [details] [associations]
symbol:LAMA5 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0005606 "laminin-1 complex" evidence=IEA] [GO:0030155
"regulation of cell adhesion" evidence=IEA] [GO:0030334 "regulation
of cell migration" evidence=IEA] [GO:0045995 "regulation of
embryonic development" evidence=IEA] [GO:0001658 "branching
involved in ureteric bud morphogenesis" evidence=IEA] [GO:0001738
"morphogenesis of a polarized epithelium" evidence=IEA] [GO:0001755
"neural crest cell migration" evidence=IEA] [GO:0001942 "hair
follicle development" evidence=IEA] [GO:0005178 "integrin binding"
evidence=IEA] [GO:0005615 "extracellular space" evidence=IEA]
[GO:0007229 "integrin-mediated signaling pathway" evidence=IEA]
[GO:0007517 "muscle organ development" evidence=IEA] [GO:0016331
"morphogenesis of embryonic epithelium" evidence=IEA] [GO:0030324
"lung development" evidence=IEA] [GO:0034446 "substrate
adhesion-dependent cell spreading" evidence=IEA] [GO:0042127
"regulation of cell proliferation" evidence=IEA] [GO:0042384
"cilium assembly" evidence=IEA] [GO:0042475 "odontogenesis of
dentin-containing tooth" evidence=IEA] [GO:0043259 "laminin-10
complex" evidence=IEA] [GO:0060445 "branching involved in salivary
gland morphogenesis" evidence=IEA] [GO:0090002 "establishment of
protein localization to plasma membrane" evidence=IEA]
InterPro:IPR009254 InterPro:IPR010307 Pfam:PF06008 Pfam:PF06009
GO:GO:0005615 GO:GO:0016477 GO:GO:0030155 GO:GO:0007155
InterPro:IPR013032 PROSITE:PS00022 GO:GO:0042127
Gene3D:2.60.120.200 InterPro:IPR008985 InterPro:IPR013320
SUPFAM:SSF49899 GO:GO:0030334 GO:GO:0007229 InterPro:IPR002049
InterPro:IPR001791 Pfam:PF00053 Pfam:PF00054 SMART:SM00180
SMART:SM00282 PROSITE:PS01248 PROSITE:PS50027 PROSITE:PS50025
GO:GO:0090002 InterPro:IPR009030 SUPFAM:SSF57184 Pfam:PF02210
GO:GO:0045995 GeneTree:ENSGT00700000104140 InterPro:IPR018031
InterPro:IPR000034 InterPro:IPR008211 Pfam:PF00052 Pfam:PF00055
SMART:SM00281 SMART:SM00136 PROSITE:PS51115 PROSITE:PS51117
GO:GO:0005606 OMA:LRHTTGP GO:GO:0043259 EMBL:AADN02019242
EMBL:AADN02019240 EMBL:AADN02019241 IPI:IPI00578246
Ensembl:ENSGALT00000008535 Uniprot:F1NZZ2
Length = 3668
Score = 237 (88.5 bits), Expect = 1.8e-26, Sum P(2) = 1.8e-26
Identities = 50/122 (40%), Positives = 64/122 (52%)
Query: 199 GGRCKCNGHASRC-IKSPQG--ELVCECRHNTAGKDCEKCKPFFSDRPWGRATVYDANEC 255
GGRC C+GHA C K P L C+C+HNT G C++C P F+ PW AT ANEC
Sbjct: 279 GGRCVCHGHADVCDAKDPSDPYRLQCDCQHNTCGGSCDRCCPGFNQFPWKPATADSANEC 338
Query: 256 KGGRCKCNGHASRCIKSPQ---------------GALVC-ECRHNTAGKDCEKCKPFFSD 299
+ C CNGHA C P+ G VC +C+H+T G +CE+C P +
Sbjct: 339 QP--CNCNGHAYDCYYDPEVDRHKASKSREDKFEGGGVCIDCQHHTTGVNCERCIPGYYR 396
Query: 300 RP 301
P
Sbjct: 397 SP 398
Score = 165 (63.1 bits), Expect = 4.4e-15, Sum P(2) = 4.4e-15
Identities = 30/61 (49%), Positives = 37/61 (60%)
Query: 257 GGRCKCNGHASRC-IKSPQGA--LVCECRHNTAGKDCEKCKPFFSDRPWGRATVYDANEC 313
GGRC C+GHA C K P L C+C+HNT G C++C P F+ PW AT ANEC
Sbjct: 279 GGRCVCHGHADVCDAKDPSDPYRLQCDCQHNTCGGSCDRCCPGFNQFPWKPATADSANEC 338
Query: 314 K 314
+
Sbjct: 339 Q 339
Score = 147 (56.8 bits), Expect = 5.2e-13, Sum P(2) = 5.2e-13
Identities = 33/104 (31%), Positives = 46/104 (44%)
Query: 202 CKCNGHASRCIKSPQGELVCECRHNTAGKDCEKCKPFFSDRPWGRATVYDANECKGGRCK 261
C CNGH+ +C+ P + C+HNT G CE+CK D G + +C G C
Sbjct: 1841 CHCNGHSDQCL--PGSGICLNCQHNTEGDHCEQCK----DGYVGSRNADGSLQCVGCPCP 1894
Query: 262 C----NGHASRCIKSPQGALVCECRHNTAGKDCEKCKPFFSDRP 301
N A C+ C C+ AG +CE+C P + P
Sbjct: 1895 LSVASNNFAIGCVHKGSSTQ-CLCKPGYAGPNCERCAPGYYGNP 1937
Score = 124 (48.7 bits), Expect = 2.0e-10, Sum P(2) = 2.0e-10
Identities = 26/76 (34%), Positives = 40/76 (52%)
Query: 220 VCECRHNTAGKDCEKCKP-FFSDRPWGRATVYDANECKGGRCKCNGHASRCIKSPQGALV 278
+C C N G C++C P ++ D G ++ +C C CNGH+ +C+ P +
Sbjct: 1807 LCFCPANYLGDSCQECAPGYYRDTK-G---LF-LGKCIP--CHCNGHSDQCL--PGSGIC 1857
Query: 279 CECRHNTAGKDCEKCK 294
C+HNT G CE+CK
Sbjct: 1858 LNCQHNTEGDHCEQCK 1873
Score = 118 (46.6 bits), Expect = 9.6e-10, Sum P(2) = 9.6e-10
Identities = 33/92 (35%), Positives = 39/92 (42%)
Query: 202 CKCN--GHASRCIKSPQGELVCECRHNTAGKDCEKCKP-FFSDRPWGRATVYDANECKGG 258
CKC G S + QG C C+ NT G+ C CK +FS T Y C+G
Sbjct: 757 CKCETKGTISGIAECQQGNGQCFCKPNTCGQFCSACKDGYFSMEN----TNYFG--CQGC 810
Query: 259 RCKCNGHASRCIKSPQGALVCECRHNTAGKDC 290
RC G + GA C CR NT G C
Sbjct: 811 RCDVGGSLGPSCEERSGA--CRCRQNTRGPTC 840
Score = 115 (45.5 bits), Expect = 2.1e-09, Sum P(2) = 2.1e-09
Identities = 26/79 (32%), Positives = 36/79 (45%)
Query: 221 CECRHNTAGKDCEKCKPFFSDRPWGRATVYDANECKGGRCKCNGHASRCIKSPQGALVCE 280
C CR G C++CKP + W T + C +C+ G S + QG C
Sbjct: 725 CACRAYVEGPACDRCKPLY----WN-LTPDNPYGCTSCKCETKGTISGIAECQQGNGQCF 779
Query: 281 CRHNTAGKDCEKCKP-FFS 298
C+ NT G+ C CK +FS
Sbjct: 780 CKPNTCGQFCSACKDGYFS 798
Score = 114 (45.2 bits), Expect = 1.8e-26, Sum P(2) = 1.8e-26
Identities = 43/186 (23%), Positives = 80/186 (43%)
Query: 39 PDFVNAAFGQEVKVNSVCGLESP----------ERYCDTSGACHVCDAGSPRGRFPAEYL 88
P + N A G + ++ CG E+ + YC G G P +Y
Sbjct: 29 PPYFNLAEGTRISASATCGEETAVTSGSRRAVEDLYCKLGGPLA---GGDPNQTIQGQYC 85
Query: 89 TDLNNPSNVTCWRSEAQTSVNSLSA------SP--------DNVTLTLSLGKKFELTYIS 134
D+ + +N ++A N++ SP + V +TL LG+ F + Y+
Sbjct: 86 -DICSSAN----SNKAHPITNAIDGTERWWQSPPLSRGLEFNQVNVTLDLGQLFHVAYVL 140
Query: 135 LSFCPKSIKPDSLAIYKSQDFGKSWQPLQFYSSQ---CKKLYGRTATGVISRGNEQEALC 191
+ F S +PD + +S DFG +++P Q+++S C + +G I++ + A+C
Sbjct: 141 IKFA-NSPRPDLWVLERSTDFGLTYEPWQYFASSKRDCIEKFGLQTVDRITK--DDHAIC 197
Query: 192 TDRHKK 197
T + +
Sbjct: 198 TTEYSR 203
Score = 108 (43.1 bits), Expect = 1.1e-08, Sum P(2) = 1.1e-08
Identities = 33/116 (28%), Positives = 46/116 (39%)
Query: 202 CKCNGHASRCIKSPQ---------------GELVC-ECRHNTAGKDCEKCKPFFSDRPWG 245
C CNGHA C P+ G VC +C+H+T G +CE+C P + P
Sbjct: 341 CNCNGHAYDCYYDPEVDRHKASKSREDKFEGGGVCIDCQHHTTGVNCERCIPGYYRSP-- 398
Query: 246 RATVYDANECKGGRCKCNGHASRCIKSPQGALVCECRHNTAGKDCEKCKPFFSDRP 301
+ C CK + C + G C C+ N G+ C C + D P
Sbjct: 399 DHPIDSPYICYRCNCKSDFTDGTC-EDLTGR--CYCKPNYTGEHCNACAEGYLDFP 451
Score = 105 (42.0 bits), Expect = 2.2e-08, Sum P(2) = 2.2e-08
Identities = 31/100 (31%), Positives = 46/100 (46%)
Query: 205 NGHASRCIKSPQGELVCECRHNTAGKDCEKCKPFFSDRPWGRATVYDANECKGGRCKCNG 264
N A C+ C C+ AG +CE+C P + +G V ++ C+ C C+G
Sbjct: 1900 NNFAIGCVHKGSSTQ-CLCKPGYAGPNCERCAPGY----YGNPLVIGSS-CQP--CDCSG 1951
Query: 265 HAS-RCIKSPQGALV--CE-CRHNTAGKDCEKCKP-FFSD 299
+ + S +L C C H+TAG CE C P F+ D
Sbjct: 1952 NTDPNMLFSSCDSLTGTCMGCMHHTAGVRCEVCAPGFYGD 1991
Score = 90 (36.7 bits), Expect = 7.7e-07, Sum P(2) = 7.7e-07
Identities = 31/97 (31%), Positives = 40/97 (41%)
Query: 202 CKCNGHAS-RCIKSPQGELV--CE-CRHNTAGKDCEKCKPFFSDRPWGRATVYDANECKG 257
C C+G+ + S L C C H+TAG CE C P F +G A A C
Sbjct: 1947 CDCSGNTDPNMLFSSCDSLTGTCMGCMHHTAGVRCEVCAPGF----YGDAVA--AKNCTQ 2000
Query: 258 GRCKCNGHASRCIKSPQGALVCECRHNTAGKDCEKCK 294
C G S C PQ C C+ G+ C+ C+
Sbjct: 2001 CNCSPCGTDS-C--HPQTGQ-CFCKAGVTGQHCDHCE 2033
Score = 84 (34.6 bits), Expect = 3.2e-06, Sum P(2) = 3.2e-06
Identities = 18/74 (24%), Positives = 30/74 (40%)
Query: 221 CECRHNTAGKDCEKCKPFFSDRPWGRATVYDANECKGGRCKCNGHASRCIKSPQGALVCE 280
C+C+ N G+ C+ C P + P C+ RC C+ + C
Sbjct: 1531 CKCKPNVIGRRCDLCAPGYYHYP----------SCR--RCDCHPDGTEVSVCDPVTGQCH 1578
Query: 281 CRHNTAGKDCEKCK 294
C+ N G C++C+
Sbjct: 1579 CKENVEGPRCDQCR 1592
Score = 84 (34.6 bits), Expect = 3.2e-06, Sum P(2) = 3.2e-06
Identities = 31/109 (28%), Positives = 43/109 (39%)
Query: 201 RCKCNGHAS--RCIKSPQGELVCECRHNTAGKDCEKCKPFFSDRPWGR---ATVY-DANE 254
RC C + C + G C C+ N G+ C C + D P A Y D E
Sbjct: 410 RCNCKSDFTDGTC-EDLTGR--CYCKPNYTGEHCNACAEGYLDFPHCYPVPAFAYNDTGE 466
Query: 255 --CKGGR---CKC--NG-HASRCIKSPQGALVCECRHNTAGKDCEKCKP 295
G+ C C G + C K P+ + C C+ N G C++C P
Sbjct: 467 QVLPAGQIINCDCYAGGTEGNACRKDPRVGM-CVCKPNFQGTHCDQCTP 514
Score = 83 (34.3 bits), Expect = 4.0e-06, Sum P(2) = 4.0e-06
Identities = 28/102 (27%), Positives = 39/102 (38%)
Query: 201 RCKCNGHA--SRCIKSPQGELVCECRHNTAGKDCEKCKPFFSDRPWGRATVYDAN-ECKG 257
RC C+ A S C + G+ C C +G C++C P + WG + EC+G
Sbjct: 2047 RCDCDVGAMGSSC-HAQTGQ--CHCLPGVSGSRCQQCAPGY----WGFSERGCRKCECRG 2099
Query: 258 GRCKCNGHASRCIKSPQGALVCECRHN-----TAGKDCEKCK 294
G C C G C HN G D +C+
Sbjct: 2100 GSCDPRTGECTCSNGLTGKQCDVCMHNYEIPVANGPDSMRCE 2141
Score = 78 (32.5 bits), Expect = 1.3e-05, Sum P(2) = 1.3e-05
Identities = 26/106 (24%), Positives = 41/106 (38%)
Query: 201 RCKCNGHASRCIKSPQGELVCECRHNTAGKDCEKCKPFFSDRPWGRATVYDANECKG-GR 259
+C C+ + G+ C C+ G+ C+ C+ + Y C G R
Sbjct: 2000 QCNCSPCGTDSCHPQTGQ--CFCKAGVTGQHCDHCEEGY----------YGFEGCSGCRR 2047
Query: 260 CKCNGHA--SRCIKSPQGALVCECRHNTAGKDCEKCKPFFSDRPWG 303
C C+ A S C + G C C +G C++C P + WG
Sbjct: 2048 CDCDVGAMGSSC-HAQTGQ--CHCLPGVSGSRCQQCAPGY----WG 2086
Score = 75 (31.5 bits), Expect = 2.7e-05, Sum P(2) = 2.7e-05
Identities = 33/129 (25%), Positives = 49/129 (37%)
Query: 202 CKCNG---HASRCIKSPQGELVCECRHNTAGKDCEKCKPFFSDRPW----GRATVYDA-N 253
C+C+G + C S G+ C CR G+ C++C P + + P G + V
Sbjct: 524 CQCSGPGQYDGTC-DSETGQ--CLCRTGFEGQLCDRCAPGYFNYPLCQLCGCSAVGTLPG 580
Query: 254 EC-KGGRCKCNGHAS--RCIKSPQG------ALVCECRHNTAGKDCEKCKPFFSDRPWGR 304
C GRC C + RC + G C C ++ G C P R
Sbjct: 581 GCDSSGRCFCKAEFAGPRCEQCSSGHHSYPHCYACSC--DSRGAVDNNCSPAGQCRCHVN 638
Query: 305 ATVYDANEC 313
T + N+C
Sbjct: 639 FTGHTCNQC 647
Score = 70 (29.7 bits), Expect = 3.4e-05, Sum P(3) = 3.4e-05
Identities = 21/72 (29%), Positives = 34/72 (47%)
Query: 201 RCKCNGHASRC-IKSP-QGELVCECRHNTAGKDCEKCKPFFSDRPWGRATVYDANECKG- 257
RC C+ + + P G+ C C+ N G C++C+ G ++ DA+ KG
Sbjct: 1557 RCDCHPDGTEVSVCDPVTGQ--CHCKENVEGPRCDQCR-------LGTFSL-DASNPKGC 1606
Query: 258 GRCKCNGHASRC 269
+C C G +RC
Sbjct: 1607 TKCFCFGATNRC 1618
Score = 67 (28.6 bits), Expect = 0.00017, Sum P(2) = 0.00017
Identities = 23/82 (28%), Positives = 27/82 (32%)
Query: 221 CECRHNTAGKDCEKCKPFFSDRPWGRATVYDANECKGGRCKCNGHA-SRCIKSPQGALVC 279
C C+ AG CE+C P C C G + C SP G C
Sbjct: 588 CFCKAEFAGPRCEQCSSGHHSYP----------HCYACSCDSRGAVDNNC--SPAGQ--C 633
Query: 280 ECRHNTAGKDCEKCKPFFSDRP 301
C N G C +C F P
Sbjct: 634 RCHVNFTGHTCNQCALGFYGYP 655
Score = 49 (22.3 bits), Expect = 3.4e-05, Sum P(3) = 3.4e-05
Identities = 8/23 (34%), Positives = 13/23 (56%)
Query: 278 VCECRHNTAGKDCEKCKP-FFSD 299
+C C N G C++C P ++ D
Sbjct: 1807 LCFCPANYLGDSCQECAPGYYRD 1829
Score = 45 (20.9 bits), Expect = 6.7e-06, Sum P(2) = 6.7e-06
Identities = 16/47 (34%), Positives = 20/47 (42%)
Query: 36 RCIPDFVNAAFGQEVKVNSVCGLESPERYCDTSGACHVCDA--GSPR 80
RC P + N Q ++V L CD+SG C C A PR
Sbjct: 556 RCAPGYFNYPLCQLCGCSAVGTLPGG---CDSSGRCF-CKAEFAGPR 598
>ZFIN|ZDB-GENE-021226-2 [details] [associations]
symbol:lamb4 "laminin, beta 4" species:7955 "Danio
rerio" [GO:0005576 "extracellular region" evidence=IEA] [GO:0007155
"cell adhesion" evidence=IEA] [GO:0005578 "proteinaceous
extracellular matrix" evidence=IEA] [GO:0005604 "basement membrane"
evidence=IEA] ZFIN:ZDB-GENE-021226-2 GO:GO:0007155 PROSITE:PS00022
PROSITE:PS01186 InterPro:IPR002049 Pfam:PF00053 SMART:SM00180
PROSITE:PS01248 PROSITE:PS50027 GO:GO:0005604 HSSP:P02468
InterPro:IPR008211 Pfam:PF00055 SMART:SM00136 PROSITE:PS51117
HOGENOM:HOG000007552 InterPro:IPR013015 PROSITE:PS51116
HOVERGEN:HBG052301 EMBL:AF468050 IPI:IPI00485935 RefSeq:NP_775383.1
UniGene:Dr.120997 ProteinModelPortal:Q8JHV6 STRING:Q8JHV6
PRIDE:Q8JHV6 GeneID:286831 KEGG:dre:286831 CTD:22798
eggNOG:NOG303831 InParanoid:Q8JHV6 KO:K06245 OrthoDB:EOG41G346
NextBio:20806482 ArrayExpress:Q8JHV6 Uniprot:Q8JHV6
Length = 1827
Score = 215 (80.7 bits), Expect = 4.7e-26, Sum P(2) = 4.7e-26
Identities = 50/134 (37%), Positives = 70/134 (52%)
Query: 200 GRCKCNGHASRCIK--SPQGE------LV---CECRHNTAGKDCEKCKPFFSDRPWGRAT 248
G C CNGHAS+CI +G+ +V C C+HNTAG +CE+C+ F+ D PW
Sbjct: 265 GSCFCNGHASQCIPVDGARGDTFTEPGMVHGRCVCQHNTAGYNCERCQDFYHDAPWRPGG 324
Query: 249 VYDANECKGGRCKCNGHASRCIKS-----PQGAL---VCE-CRHNTAGKDCEKCKPFFSD 299
D++ CK RC C+ H+ +C G + VC+ CR+N G CE C PF+
Sbjct: 325 KADSDVCK--RCNCHSHSEKCHFELARYLATGGVSGGVCDDCRNNRIGPQCELCGPFYYQ 382
Query: 300 RPWGRATVYDANEC 313
P + +V D C
Sbjct: 383 DP--QRSVDDPYAC 394
Score = 151 (58.2 bits), Expect = 4.7e-26, Sum P(2) = 4.7e-26
Identities = 42/167 (25%), Positives = 78/167 (46%)
Query: 26 DPCYENGRPRRCIPDFVNAAFGQ--EVKVNSVCGLESPERYC-----DTSGACHVCDAGS 78
D C N C P+ + G+ ++ +S CGL P+ YC + C CD+ S
Sbjct: 23 DECVGNS----CYPNLGDLMVGRAAQLAASSTCGLYRPQNYCILGYLENERKCFTCDSRS 78
Query: 79 PRGRFPAEYLTDLNNPSN------VTCWRSEAQTSVNSLSASPDNVTLTLSLGKKFELTY 132
P Y D +NPS+ +T ++ E + V++ L L F+ ++
Sbjct: 79 P-------Y-NDYHNPSSHRIENIITTFQPERKMKWWQSENGVHEVSIQLDLEAMFQFSH 130
Query: 133 ISLSFCPKSIKPDSLAIYKSQDFGKSWQPLQFYSSQCKKLYGRTATG 179
+ L+F KS +P S+ + +S+DFG++W+ ++++ C + + G
Sbjct: 131 LILTF--KSFRPASMLVERSKDFGRTWKVFRYFAEDCANSFPGISEG 175
Score = 141 (54.7 bits), Expect = 6.5e-17, Sum P(2) = 6.5e-17
Identities = 29/68 (42%), Positives = 39/68 (57%)
Query: 258 GRCKCNGHASRCIK--SPQG------ALV---CECRHNTAGKDCEKCKPFFSDRPWGRAT 306
G C CNGHAS+CI +G +V C C+HNTAG +CE+C+ F+ D PW
Sbjct: 265 GSCFCNGHASQCIPVDGARGDTFTEPGMVHGRCVCQHNTAGYNCERCQDFYHDAPWRPGG 324
Query: 307 VYDANECK 314
D++ CK
Sbjct: 325 KADSDVCK 332
Score = 134 (52.2 bits), Expect = 3.5e-16, Sum P(2) = 3.5e-16
Identities = 33/106 (31%), Positives = 47/106 (44%)
Query: 201 RCKCNGHASRCIKSPQGEL--------VCE-CRHNTAGKDCEKCKPFFSDRPWGRATVYD 251
RC C+ H+ +C L VC+ CR+N G CE C PF+ P + +V D
Sbjct: 333 RCNCHSHSEKCHFELARYLATGGVSGGVCDDCRNNRIGPQCELCGPFYYQDP--QRSVDD 390
Query: 252 ANECKGGRCKCNGHASRCIKSPQGALVCECRHNTAGKDCEKCKPFF 297
C C +G R + P C C+ N G+ C++CK F
Sbjct: 391 PYACIPCDCDLDGSVDRGLCDPVNGQ-CVCKQNIEGERCDRCKVGF 435
Score = 129 (50.5 bits), Expect = 1.1e-15, Sum P(2) = 1.1e-15
Identities = 38/114 (33%), Positives = 53/114 (46%)
Query: 201 RCKCNGHASRCIKSP-QGELVCECRHNTAGKDCEKCKPFFSDRPWGRATVYDANECKGGR 259
RC+CN A C P G+ + +CR ++AG++CE+C+ + P C+
Sbjct: 946 RCQCNRLADIC--DPITGDCL-DCREHSAGRNCERCEEGYVGDP------VSGQPCEPCL 996
Query: 260 CK-CNGH----ASRCIKSPQ-GALVCECRHNTAGKDCEKCKP-FFSDR--PWGR 304
C NG A C K P+ GA CEC G C+ C P F+ D P GR
Sbjct: 997 CPDLNGSGRFFAFSCNKDPRSGAPYCECLPGHTGPQCDSCSPGFYGDLRLPGGR 1050
Score = 116 (45.9 bits), Expect = 2.6e-14, Sum P(2) = 2.6e-14
Identities = 37/115 (32%), Positives = 44/115 (38%)
Query: 208 ASRCIKSPQ-GELVCECRHNTAGKDCEKCKP-FFSDR--PWGRATVYDANECKGGRCKCN 263
A C K P+ G CEC G C+ C P F+ D P GR CK C CN
Sbjct: 1008 AFSCNKDPRSGAPYCECLPGHTGPQCDSCSPGFYGDLRLPGGR--------CK--ECCCN 1057
Query: 264 GH-----ASRCIKSPQGALVCECRHNTAGKDCEKCKPFFSDRPWGRATVYDANEC 313
+ C P C HNT G C+ CK + +G A D EC
Sbjct: 1058 NNIDPRDGDAC--DPVTGECLRCLHNTEGPRCQSCKRGY----YGNALAQDCKEC 1106
Score = 115 (45.5 bits), Expect = 3.3e-14, Sum P(2) = 3.3e-14
Identities = 39/140 (27%), Positives = 54/140 (38%)
Query: 165 YSSQCKKLYGRTAT--GVISRGNEQEALCTDRHKKQG-GRCKCNGHASRCIKSPQGELVC 221
Y S C K G+ VI R + A T G C C+ S Q C
Sbjct: 861 YGSSCSKFGGQCQCKPNVIGRCCDSCAPLTYGLGPNGCSPCDCDRSGSTTELCDQTTGQC 920
Query: 222 ECRHNTAGKDCEKCKPFFSDRPWGRATVYDANECKGGRCKCNGHASRCIKSPQGALVCEC 281
CR G C +C P + P C+ RC+CN A C P +C
Sbjct: 921 SCRDGITGLQCNRCYPGYYGFPL----------CR--RCQCNRLADIC--DPITGDCLDC 966
Query: 282 RHNTAGKDCEKCKPFFSDRP 301
R ++AG++CE+C+ + P
Sbjct: 967 REHSAGRNCERCEEGYVGDP 986
Score = 111 (44.1 bits), Expect = 8.5e-14, Sum P(2) = 8.5e-14
Identities = 33/116 (28%), Positives = 51/116 (43%)
Query: 202 CKCNGHASRCIKSP-QGELVCECRHNTAGKDCEKCKPFFSDRPWGRATVYDANECKGGRC 260
C +G R + P G+ C C+ N G+ C++CK F +G + D + C+ C
Sbjct: 399 CDLDGSVDRGLCDPVNGQ--CVCKQNIEGERCDRCKVGF----YGFSRD-DPSGCQ--LC 449
Query: 261 KCNGHASRCIKSPQGALV--CECRHNTAGKDCEKCKPFFSDRPWGRA-TVYDANEC 313
+CN + + +P C C H G C++C P + WG TVY C
Sbjct: 450 RCNFLGTIQVGNPCDPTTGRCICEHFAYGSQCDQCLPGY----WGLGNTVYGCIPC 501
Score = 98 (39.6 bits), Expect = 1.9e-12, Sum P(2) = 1.9e-12
Identities = 28/97 (28%), Positives = 37/97 (38%)
Query: 202 CKCNGHASRCIKSPQGELV--CECRHNTAGKDCEKCKPFFSDRPWGRA-TVYDANECKGG 258
C+CN + + +P C C H G C++C P + WG TVY C
Sbjct: 449 CRCNFLGTIQVGNPCDPTTGRCICEHFAYGSQCDQCLPGY----WGLGNTVYGCIPCD-- 502
Query: 259 RCKCNGHASRCIKSPQGALVCECRHNTAGKDCEKCKP 295
C G S G C+CR N G+ C P
Sbjct: 503 -CDIGGALKTECSSVDGQ--CKCRPNMVGQKCNDPAP 536
Score = 80 (33.2 bits), Expect = 1.4e-10, Sum P(2) = 1.4e-10
Identities = 27/98 (27%), Positives = 36/98 (36%)
Query: 202 CKCNG-HASRCIKSP-QGELVCECRHNTAGKDCEKCKPFFSDRPWGRATVYDANECKGGR 259
C CN HA I G+ C C+ G+ C++C P P + D N
Sbjct: 1163 CNCNREHALNYICDKITGQ--CLCQPEYGGRICDECGPNHFGNPDLQCMFCDCNLEGTVH 1220
Query: 260 CKCNGHASRCIKSP--QGALVCECR--HNTAGKDCEKC 293
C+ + C+ P G EC HN CE C
Sbjct: 1221 PACDAYTGECLCKPGVTGPFCDECAPGHNNNFPACEPC 1258
Score = 73 (30.8 bits), Expect = 7.3e-10, Sum P(2) = 7.3e-10
Identities = 33/126 (26%), Positives = 44/126 (34%)
Query: 187 QEALCTDRHKKQGGRCKCNGHASRCIKSPQGELVCECRHNTAGKDCEKCKPFFSDRPWGR 246
+E C DR +C G C + G+ C CR G C +C D W
Sbjct: 1104 KECSC-DRRGTDDSKCPA-GSPCFCDQDT-GQ--CPCRPGVQGALCNEC----DDGYWNM 1154
Query: 247 ATVYDANECKGGRCKCNG-HASRCIKSPQGALVCECRHNTAGKDCEKCKPFFSDRPWGRA 305
Y C+ C CN HA I C C+ G+ C++C P P +
Sbjct: 1155 DGDYG---CQP--CNCNREHALNYICDKITGQ-CLCQPEYGGRICDECGPNHFGNPDLQC 1208
Query: 306 TVYDAN 311
D N
Sbjct: 1209 MFCDCN 1214
Score = 47 (21.6 bits), Expect = 3.4e-07, Sum P(2) = 3.4e-07
Identities = 12/28 (42%), Positives = 13/28 (46%)
Query: 275 GALVCECRHNTA-GKDCEK------CKP 295
GA+ C C H A G C K CKP
Sbjct: 849 GAVSCNCHHVGAYGSSCSKFGGQCQCKP 876
Score = 40 (19.1 bits), Expect = 0.00015, Sum P(2) = 0.00015
Identities = 9/20 (45%), Positives = 12/20 (60%)
Query: 28 CYENGRPRRCIPDFVNAAFG 47
C+ NG +CIP V+ A G
Sbjct: 267 CFCNGHASQCIP--VDGARG 284
Score = 39 (18.8 bits), Expect = 0.00083, Sum P(3) = 0.00082
Identities = 9/24 (37%), Positives = 12/24 (50%)
Query: 55 VCG---LESPERYCDTSGACHVCD 75
+CG + P+R D AC CD
Sbjct: 375 LCGPFYYQDPQRSVDDPYACIPCD 398
>UNIPROTKB|P55268 [details] [associations]
symbol:LAMB2 "Laminin subunit beta-2" species:9606 "Homo
sapiens" [GO:0007155 "cell adhesion" evidence=IEA] [GO:0005178
"integrin binding" evidence=IEA] [GO:0007411 "axon guidance"
evidence=IEA] [GO:0007528 "neuromuscular junction development"
evidence=IEA] [GO:0007601 "visual perception" evidence=IEA]
[GO:0014002 "astrocyte development" evidence=IEA] [GO:0014044
"Schwann cell development" evidence=IEA] [GO:0045202 "synapse"
evidence=IEA] [GO:0048677 "axon extension involved in regeneration"
evidence=IEA] [GO:0060041 "retina development in camera-type eye"
evidence=IEA] [GO:0072249 "metanephric glomerular visceral
epithelial cell development" evidence=IEA] [GO:0072274 "metanephric
glomerular basement membrane development" evidence=IEA] [GO:0005604
"basement membrane" evidence=IDA] [GO:0005608 "laminin-3 complex"
evidence=IPI] [GO:0005198 "structural molecule activity"
evidence=NAS] [GO:0005605 "basal lamina" evidence=TAS] [GO:0005576
"extracellular region" evidence=TAS] [GO:0031012 "extracellular
matrix" evidence=ISS;IDA] [GO:0043260 "laminin-11 complex"
evidence=TAS] Pathway_Interaction_DB:a6b1_a6b4_integrin_pathway
GO:GO:0007411 GO:GO:0005198 GO:GO:0007528 GO:GO:0007601
GO:GO:0007155 InterPro:IPR013032 PROSITE:PS00022 GO:GO:0060041
PROSITE:PS01186 InterPro:IPR002049 Pfam:PF00053 SMART:SM00180
PROSITE:PS01248 PROSITE:PS50027
Pathway_Interaction_DB:amb2_neutrophils_pathway GO:GO:0014044
GO:GO:0014002 Orphanet:98915 InterPro:IPR008211 Pfam:PF00055
SMART:SM00136 PROSITE:PS51117 GO:GO:0005608 GO:GO:0043260
eggNOG:NOG241384 HOGENOM:HOG000007552 InterPro:IPR013015
PROSITE:PS51116 HOVERGEN:HBG052301 EMBL:Z68155 EMBL:Z68156
EMBL:X79683 EMBL:S77512 IPI:IPI00296922 PIR:A55677 PIR:S53869
RefSeq:NP_002283.3 UniGene:Hs.439726 ProteinModelPortal:P55268
SMR:P55268 DIP:DIP-42106N IntAct:P55268 MINT:MINT-1197111
STRING:P55268 PhosphoSite:P55268 DMDM:156630892 PaxDb:P55268
PRIDE:P55268 DNASU:3913 Ensembl:ENST00000305544
Ensembl:ENST00000418109 GeneID:3913 KEGG:hsa:3913 UCSC:uc003cwe.3
CTD:3913 GeneCards:GC03M049133 HGNC:HGNC:6487 HPA:CAB000053
HPA:HPA001895 MIM:150325 MIM:609049 MIM:614199 neXtProt:NX_P55268
Orphanet:2670 PharmGKB:PA164741827 InParanoid:P55268 KO:K06243
OMA:QPYCIVS OrthoDB:EOG4KSPHW PhylomeDB:P55268 ChiTaRS:LAMB2
GenomeRNAi:3913 NextBio:15371 ArrayExpress:P55268 Bgee:P55268
CleanEx:HS_LAMB2 Genevestigator:P55268 GermOnline:ENSG00000172037
GO:GO:0048677 GO:GO:0072274 GO:GO:0072249 Uniprot:P55268
Length = 1798
Score = 225 (84.3 bits), Expect = 1.4e-25, Sum P(2) = 1.4e-25
Identities = 46/119 (38%), Positives = 66/119 (55%)
Query: 200 GRCKCNGHASRCIKSP------QGEL--VCECRHNTAGKDCEKCKPFFSDRPWGRATVYD 251
G C C GHAS C +P +G + C C+HNT G +CE+C+ F+ D PW A
Sbjct: 281 GNCFCYGHASECAPAPGAPAHAEGMVHGACICKHNTRGLNCEQCQDFYRDLPWRPAEDGH 340
Query: 252 ANECKGGRCKCNGHASRC-----IKSPQGAL---VCE-CRHNTAGKDCEKCKPFFSDRP 301
++ C+ +C+C+GH C + G + VC+ C+HNTAG+ CE C+PFF P
Sbjct: 341 SHACR--KCECHGHTHSCHFDMAVYLASGNVSGGVCDGCQHNTAGRHCELCRPFFYRDP 397
Score = 147 (56.8 bits), Expect = 3.2e-15, Sum P(2) = 3.2e-15
Identities = 38/121 (31%), Positives = 54/121 (44%)
Query: 193 DRHKKQGGRCKCNGHASRC-----IKSPQGEL---VCE-CRHNTAGKDCEKCKPFFSDRP 243
D H +C+C+GH C + G + VC+ C+HNTAG+ CE C+PFF P
Sbjct: 338 DGHSHACRKCECHGHTHSCHFDMAVYLASGNVSGGVCDGCQHNTAGRHCELCRPFFYRDP 397
Query: 244 WGRATVYDANECKGGRCKCNGH--ASRCIK--SPQGALV---CECRHNTAGKDCEKCKPF 296
+ D C+ C G RC P LV C C+ + G C++C+
Sbjct: 398 --TKDLRDPAVCRSCDCDPMGSQDGGRCDSHDDPALGLVSGQCRCKEHVVGTRCQQCRDG 455
Query: 297 F 297
F
Sbjct: 456 F 456
Score = 132 (51.5 bits), Expect = 1.6e-13, Sum P(2) = 1.6e-13
Identities = 25/65 (38%), Positives = 36/65 (55%)
Query: 258 GRCKCNGHASRCIKSP------QGAL--VCECRHNTAGKDCEKCKPFFSDRPWGRATVYD 309
G C C GHAS C +P +G + C C+HNT G +CE+C+ F+ D PW A
Sbjct: 281 GNCFCYGHASECAPAPGAPAHAEGMVHGACICKHNTRGLNCEQCQDFYRDLPWRPAEDGH 340
Query: 310 ANECK 314
++ C+
Sbjct: 341 SHACR 345
Score = 129 (50.5 bits), Expect = 1.4e-25, Sum P(2) = 1.4e-25
Identities = 38/142 (26%), Positives = 68/142 (47%)
Query: 37 CIPDFVNAAFGQ--EVKVNSVCGLESPERYCDTSGA-----CHVCDAGSPRGRFPAEYLT 89
C P + G+ + +S CGL P+ YC S C +CD+ P F A
Sbjct: 47 CYPATGDLLVGRADRLTASSTCGLNGPQPYCIVSHLQDEKKCFLCDSRRP---FSARDNP 103
Query: 90 DLNNPSNV-TCWRSEAQTSV-NSLSASPDNVTLTLSLGKKFELTYISLSFCPKSIKPDSL 147
+ NV T + + + + S + P VT+ L L +F T++ ++F K+ +P ++
Sbjct: 104 HSHRIQNVVTSFAPQRRAAWWQSENGIPA-VTIQLDLEAEFHFTHLIMTF--KTFRPAAM 160
Query: 148 AIYKSQDFGKSWQPLQFYSSQC 169
+ +S DFG++W +++S C
Sbjct: 161 LVERSADFGRTWHVYRYFSYDC 182
Score = 114 (45.2 bits), Expect = 1.3e-11, Sum P(2) = 1.3e-11
Identities = 43/144 (29%), Positives = 62/144 (43%)
Query: 166 SSQCKKLYGRTAT--GVISRGNEQEALCTDRHKKQG--G--RCKCN--GHASRCIKSPQG 217
SS+C G+ GV+ R + LC + G G C+C+ G S + G
Sbjct: 792 SSECNPHGGQCLCKPGVVGRRCD---LCAPGYYGFGPTGCQACQCSHEGALSSLCEKTSG 848
Query: 218 ELVCECRHNTAGKDCEKCKPFFSDRPWGRATVYDANECKGGRCKCNGHASRCIKSPQGAL 277
+ C CR G C++C+ WG + C+ C CNGHA C + GA
Sbjct: 849 Q--CLCRTGAFGLRCDRCQR----GQWGFPS------CRP--CVCNGHADEC-NTHTGAC 893
Query: 278 VCECRHNTAGKDCEKCKPFFSDRP 301
+ CR +T G+ CE+C F P
Sbjct: 894 L-GCRDHTGGEHCERCIAGFHGDP 916
Score = 112 (44.5 bits), Expect = 2.0e-11, Sum P(2) = 2.0e-11
Identities = 33/99 (33%), Positives = 40/99 (40%)
Query: 218 ELVCECRHNTAGKDCEKCKP-FFSD--RPWGRATVYDANECKGGRCKCNGHASRCIKSPQ 274
++VC CR G CE C P F D RP GR + EC G + A C P
Sbjct: 951 QIVCHCRAGYTGLRCEACAPGHFGDPSRPGGRCQLC---ECSGNIDPMDPDA--C--DPH 1003
Query: 275 GALVCECRHNTAGKDCEKCKPFFSDRPWGRATVYDANEC 313
C H+T G C CKP F G+A + C
Sbjct: 1004 TGQCLRCLHHTEGPHCAHCKPGFH----GQAARQSCHRC 1038
Score = 112 (44.5 bits), Expect = 2.0e-11, Sum P(2) = 2.0e-11
Identities = 27/107 (25%), Positives = 48/107 (44%)
Query: 191 CTDRHKKQGGRCKCNGHASRCIKSPQGELVCECRHNTAGKDCEKCKPFFSDRPWGRATVY 250
C + GGRC + H + G+ C C+ + G C++C+ F +G ++
Sbjct: 412 CDPMGSQDGGRC--DSHDDPALGLVSGQ--CRCKEHVVGTRCQQCRDGF----FG-LSIS 462
Query: 251 DANECKGGRCKCNGHASRCIKSP--QGALVCECRHNTAGKDCEKCKP 295
D C+ RC+CN + +P + C C+ G+ C++C P
Sbjct: 463 DRLGCR--RCQCNARGTVPGSTPCDPNSGSCYCKRLVTGRGCDRCLP 507
Score = 111 (44.1 bits), Expect = 2.6e-11, Sum P(2) = 2.6e-11
Identities = 28/116 (24%), Positives = 53/116 (45%)
Query: 201 RCKCNGHASRCIKSP--QGELVCECRHNTAGKDCEKCKPFFSDRPWGRATVYDANECKGG 258
RC+CN + +P C C+ G+ C++C P WG + +D C+
Sbjct: 469 RCQCNARGTVPGSTPCDPNSGSCYCKRLVTGRGCDRCLPGH----WGLS--HDLLGCRP- 521
Query: 259 RCKCNGHASRCIKSPQGALVCECRHNTAGKDCEKCKPFFSDRPWGRATVYDANECK 314
C C+ + + +G C CR + G+ CE+ +P + RP+ +++A + +
Sbjct: 522 -CDCDVGGALDPQCDEGTGQCHCRQHMVGRRCEQVQPGYF-RPFLDHLIWEAEDTR 575
Score = 100 (40.3 bits), Expect = 3.6e-10, Sum P(2) = 3.6e-10
Identities = 36/131 (27%), Positives = 49/131 (37%)
Query: 197 KQGGRCK---CNGHASRCIKS---PQGELVCECRHNTAGKDCEKCKPFFSDRPWGRATVY 250
+ GGRC+ C+G+ P C H+T G C CKP F G+A
Sbjct: 978 RPGGRCQLCECSGNIDPMDPDACDPHTGQCLRCLHHTEGPHCAHCKPGFH----GQAA-- 1031
Query: 251 DANECKGGRCKCN--G-HASRCIKSPQ-----GALVCECRHNTAGKDCEKCKPFFSDRPW 302
C RC CN G + +C Q + C C N G C++C P F W
Sbjct: 1032 -RQSCH--RCTCNLLGTNPQQCPSPDQCHCDPSSGQCPCLPNVQGPSCDRCAPNF----W 1084
Query: 303 GRATVYDANEC 313
+ + C
Sbjct: 1085 NLTSGHGCQPC 1095
Score = 91 (37.1 bits), Expect = 3.0e-09, Sum P(2) = 3.0e-09
Identities = 25/95 (26%), Positives = 39/95 (41%)
Query: 202 CKCNGHASRCIK-SPQGELVCECRHNTAGKDCEKCKP-FFSDRPWGRATVYDANECKGGR 259
C+CN S + +P G C C+ G+ C+ C P ++ P G C+ +
Sbjct: 783 CQCNPQGSLSSECNPHGGQ-CLCKPGVVGRRCDLCAPGYYGFGPTG---------CQACQ 832
Query: 260 CKCNGHASRCIKSPQGALVCECRHNTAGKDCEKCK 294
C G S + G C CR G C++C+
Sbjct: 833 CSHEGALSSLCEKTSGQ--CLCRTGAFGLRCDRCQ 865
Score = 88 (36.0 bits), Expect = 6.2e-09, Sum P(2) = 6.2e-09
Identities = 31/106 (29%), Positives = 42/106 (39%)
Query: 199 GGRCK-CNGHASRCIKSPQGELV--CECRHNTAGKDCEKCKPFFSDRPWGRATVYDANEC 255
G C+ C H SR E C CR G+ C +C+ WG + +C
Sbjct: 1089 GHGCQPCACHPSRARGPTCNEFTGQCHCRAGFGGRTCSECQELH----WGDPGL----QC 1140
Query: 256 KGGRCKCNGHASRCIKSPQGALV---CECRHNTAGKDCEKCKPFFS 298
C C+ SR I +PQ C CR +G C++C FS
Sbjct: 1141 HA--CDCD---SRGIDTPQCHRFTGHCSCRPGVSGVRCDQCARGFS 1181
Score = 65 (27.9 bits), Expect = 1.4e-06, Sum P(2) = 1.4e-06
Identities = 14/46 (30%), Positives = 22/46 (47%)
Query: 260 CKCNGHASRCIK-SPQGALVCECRHNTAGKDCEKCKP-FFSDRPWG 303
C+CN S + +P G C C+ G+ C+ C P ++ P G
Sbjct: 783 CQCNPQGSLSSECNPHGGQ-CLCKPGVVGRRCDLCAPGYYGFGPTG 827
>UNIPROTKB|F1MF28 [details] [associations]
symbol:NTN5 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005576 "extracellular region" evidence=IEA]
InterPro:IPR001134 PROSITE:PS50189 GO:GO:0005576 InterPro:IPR002049
InterPro:IPR008993 Pfam:PF00053 SMART:SM00180 SUPFAM:SSF50242
PROSITE:PS01248 PROSITE:PS50027 InterPro:IPR018933 Pfam:PF01759
SMART:SM00643 GeneTree:ENSGT00700000104042 CTD:126147 OMA:GGPFLLT
EMBL:DAAA02047467 IPI:IPI01001483 RefSeq:NP_001193801.1
UniGene:Bt.48155 Ensembl:ENSBTAT00000061223 GeneID:785970
KEGG:bta:785970 NextBio:20927619 Uniprot:F1MF28
Length = 489
Score = 247 (92.0 bits), Expect = 1.5e-25, Sum P(2) = 1.5e-25
Identities = 67/205 (32%), Positives = 93/205 (45%)
Query: 114 SPDNVTLTLSLGKKFELTYISLSFCPKSIKPDSLAIYKSQDFGKSWQPLQFYSSQCKKLY 173
+P N +LTL LG F L+ +SL FC P +L + + G W+ L + L
Sbjct: 59 APCNGSLTLGLGGPFLLSSVSLRFCTPG--PPALVLSAAWATGGPWRSLWRRPAWPGVLG 116
Query: 174 G-RTATGVISRGNEQEALCTDRHKKQGGR-----------CKCNGHASRCIKSPQGELVC 221
G + G + + + + GGR C+C+GHA+RC + C
Sbjct: 117 GPERVIFRVPAGPKASVVASHLRLELGGRGGLAAAGVRGRCQCHGHAARCAARDRPPR-C 175
Query: 222 ECRHNTAGKDCEKCKPFFSDRPWGRATVYDANECKGGRCKCNGHASRC--------IKSP 273
CRH+T G CE C+P D PW AT + C C CN HA RC +
Sbjct: 176 RCRHHTTGPGCESCQPSHRDWPWRPATPRHPHPCLP--CSCNQHARRCRFNSELFRLSGG 233
Query: 274 QGALVCE-CRHNTAGKDCEKCKPFF 297
+ VCE CRH+TAG+ C C+P F
Sbjct: 234 RSGGVCERCRHHTAGRHCHYCQPGF 258
Score = 144 (55.7 bits), Expect = 3.3e-10, Sum P(2) = 3.3e-10
Identities = 25/56 (44%), Positives = 32/56 (57%)
Query: 258 GRCKCNGHASRCIKSPQGALVCECRHNTAGKDCEKCKPFFSDRPWGRATVYDANEC 313
GRC+C+GHA+RC + C CRH+T G CE C+P D PW AT + C
Sbjct: 155 GRCQCHGHAARCAARDRPPR-CRCRHHTTGPGCESCQPSHRDWPWRPATPRHPHPC 209
Score = 136 (52.9 bits), Expect = 2.8e-09, Sum P(2) = 2.8e-09
Identities = 37/113 (32%), Positives = 46/113 (40%)
Query: 192 TDRHKKQGGRCKCNGHASRC-IKSPQGEL-------VCE-CRHNTAGKDCEKCKPFFSDR 242
T RH C CN HA RC S L VCE CRH+TAG+ C C+P F
Sbjct: 202 TPRHPHPCLPCSCNQHARRCRFNSELFRLSGGRSGGVCERCRHHTAGRHCHYCQPGFWRD 261
Query: 243 PWGRATVYDANECKGGRCKCNGHASRCIKSPQGALVCECRHNTAGKDCEKCKP 295
P G+ + C+ +C G G C C+ G C +C P
Sbjct: 262 P-GQP-ISSRKACRACQCHPIGATGGACNQTNGQ--CSCKLGVTGLTCNRCGP 310
Score = 70 (29.7 bits), Expect = 1.5e-25, Sum P(2) = 1.5e-25
Identities = 16/39 (41%), Positives = 19/39 (48%)
Query: 24 NSDPCYE-NGRPRRCIPDFVNAAFGQEVKVNSVCGLESP 61
++DPCY GRPR C+P A G CG SP
Sbjct: 15 SADPCYHPGGRPRFCLPPVTQLA-GMAASCPQACG-PSP 51
>UNIPROTKB|F1RIQ1 [details] [associations]
symbol:NTN5 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005576 "extracellular region" evidence=IEA]
InterPro:IPR001134 PROSITE:PS50189 GO:GO:0005576 InterPro:IPR002049
InterPro:IPR008993 Pfam:PF00053 SMART:SM00180 SUPFAM:SSF50242
PROSITE:PS01248 PROSITE:PS50027 InterPro:IPR018933 Pfam:PF01759
SMART:SM00643 GeneTree:ENSGT00700000104042 OMA:GGPFLLT
EMBL:CU929759 Ensembl:ENSSSCT00000003491 Uniprot:F1RIQ1
Length = 489
Score = 255 (94.8 bits), Expect = 1.7e-25, Sum P(2) = 1.7e-25
Identities = 69/202 (34%), Positives = 90/202 (44%)
Query: 117 NVTLTLSLGKKFELTYISLSFCPKSIKPDSLAIYKSQDFGKSWQPLQFYSSQCKKLYG-R 175
N ++TL LG F LT +SL FC P +L + + G W+ L + L G
Sbjct: 62 NGSMTLGLGGPFLLTSVSLRFCTPG--PPALVLSAAWTSGGPWRSLWRRPAWPGALGGPE 119
Query: 176 TATGVISRGNEQEALCTDRHKKQGGR-----------CKCNGHASRCIKSPQGELVCECR 224
T G + + + GGR C+C+GHA+RC Q C CR
Sbjct: 120 RVTFRAPPGLRTSVVASHLRVELGGRAGLAAAGVRGRCQCHGHAARCAARAQPPR-CRCR 178
Query: 225 HNTAGKDCEKCKPFFSDRPWGRATVYDANECKGGRCKCNGHASRC--------IKSPQGA 276
H+T G CE C+P D PW AT + C C CN HA RC + Q
Sbjct: 179 HHTTGPGCESCRPSHRDWPWRPATPQHPHPCLP--CSCNQHARRCRFNSELFRLSGGQSG 236
Query: 277 LVCE-CRHNTAGKDCEKCKPFF 297
VCE CRH+TAG+ C C+P F
Sbjct: 237 GVCERCRHHTAGRHCHYCQPGF 258
Score = 150 (57.9 bits), Expect = 5.5e-10, Sum P(2) = 5.5e-10
Identities = 26/56 (46%), Positives = 32/56 (57%)
Query: 258 GRCKCNGHASRCIKSPQGALVCECRHNTAGKDCEKCKPFFSDRPWGRATVYDANEC 313
GRC+C+GHA+RC Q C CRH+T G CE C+P D PW AT + C
Sbjct: 155 GRCQCHGHAARCAARAQPPR-CRCRHHTTGPGCESCRPSHRDWPWRPATPQHPHPC 209
Score = 133 (51.9 bits), Expect = 5.2e-08, Sum P(2) = 5.2e-08
Identities = 36/113 (31%), Positives = 45/113 (39%)
Query: 192 TDRHKKQGGRCKCNGHASRC--------IKSPQGELVCE-CRHNTAGKDCEKCKPFFSDR 242
T +H C CN HA RC + Q VCE CRH+TAG+ C C+P F
Sbjct: 202 TPQHPHPCLPCSCNQHARRCRFNSELFRLSGGQSGGVCERCRHHTAGRHCHYCQPGFWRD 261
Query: 243 PWGRATVYDANECKGGRCKCNGHASRCIKSPQGALVCECRHNTAGKDCEKCKP 295
P T A C+ +C G G C C+ G C +C P
Sbjct: 262 PSQPITSRKA--CRACQCHPIGATGGTCNQTSGQ--CSCKIGVTGLTCNRCGP 310
Score = 61 (26.5 bits), Expect = 1.7e-25, Sum P(2) = 1.7e-25
Identities = 11/23 (47%), Positives = 14/23 (60%)
Query: 24 NSDPCYE-NGRPRRCIPDFVNAA 45
++DPCY GRPR C+P A
Sbjct: 15 SADPCYHPGGRPRFCLPPVTQLA 37
>MGI|MGI:99915 [details] [associations]
symbol:Lamb3 "laminin, beta 3" species:10090 "Mus musculus"
[GO:0005576 "extracellular region" evidence=IEA] [GO:0005578
"proteinaceous extracellular matrix" evidence=IEA] [GO:0005604
"basement membrane" evidence=ISS;IDA] [GO:0005610 "laminin-5
complex" evidence=IDA] [GO:0007155 "cell adhesion" evidence=IEA]
[GO:0032403 "protein complex binding" evidence=ISO] [GO:0050873
"brown fat cell differentiation" evidence=IDA] MGI:MGI:99915
GO:GO:0050873 GO:GO:0007155 PROSITE:PS00022 PROSITE:PS01186
InterPro:IPR002049 Pfam:PF00053 SMART:SM00180 PROSITE:PS01248
PROSITE:PS50027 InterPro:IPR008211 Pfam:PF00055 SMART:SM00136
PROSITE:PS51117 EMBL:CH466555 GO:GO:0005610
GeneTree:ENSGT00620000087753 CTD:3914 eggNOG:NOG289025
HOGENOM:HOG000113279 HOVERGEN:HBG052302 KO:K06244 OMA:RSQMEED
OrthoDB:EOG4JDH5Z ChiTaRS:LAMB3 EMBL:U43298 EMBL:AK155769
EMBL:BC008516 IPI:IPI00117093 RefSeq:NP_032510.2 UniGene:Mm.435441
ProteinModelPortal:Q61087 SMR:Q61087 STRING:Q61087
PhosphoSite:Q61087 PaxDb:Q61087 PRIDE:Q61087
Ensembl:ENSMUST00000016315 Ensembl:ENSMUST00000159955 GeneID:16780
KEGG:mmu:16780 InParanoid:Q91V90 NextBio:290632 Bgee:Q61087
CleanEx:MM_LAMB3 Genevestigator:Q61087
GermOnline:ENSMUSG00000026639 Uniprot:Q61087
Length = 1168
Score = 299 (110.3 bits), Expect = 3.5e-25, P = 3.5e-25
Identities = 85/299 (28%), Positives = 141/299 (47%)
Query: 37 CIPDFVNAAFG--QEVKVNSVCGLESPERYCDTSGA----CHVCDAGSPRGRFPAEYLTD 90
C P + G Q ++ +S CGL PE YC G C CD+ PR + + + +
Sbjct: 26 CYPPVGDLLIGRTQLLRASSTCGLTKPETYCTQYGQWQMKCCKCDSRLPRN-YNSHRVEN 84
Query: 91 LNNPSNVTCWRSEAQTSVNSLSASPDNVTLTLSLGKKFELTYISLSFCPKSIKPDSLAIY 150
+ + S W ++Q V SP V+L L L K+ +L I + F K + P + I
Sbjct: 85 VASSSGPMRWW-QSQNDV-----SP--VSLQLDLDKRMQLQDIMMDF--KGLTPAGMLIE 134
Query: 151 KSQDFGKSWQPLQFYSSQCKKLYGRTATGVISRGNEQEALCTDRHKKQ-----GGRCKCN 205
+S DFGK+W+ Q+ ++ C + + G N Q+ C ++ GG+ + N
Sbjct: 135 RSSDFGKTWRVYQYLATDCASTFPQVHQG--QPKNWQDVRCRPLSQRPNGHLTGGKVQLN 192
Query: 206 -GHASRCIKSPQGELVCECRHNTAGK-DCEKCKPFFSDRPWGRATVYDANECK-GGRCKC 262
+ I + Q + + E T + + K P + + + ++ + G C C
Sbjct: 193 LMDLASAIPASQSKKIQELGDITNLRVNFTKLAPVPQRGSYPPSAYFAVSQLRLQGSCFC 252
Query: 263 NGHASRCIKSPQGAL-------VCECRHNTAGKDCEKCKPFFSDRPWGRATVYDANECK 314
+GHA RC +P G+ VC C+HNTAG +C++C PF+++RPW A D +EC+
Sbjct: 253 HGHADRCAPNPGGSTTAVQVNNVCVCQHNTAGPNCDRCAPFYNNRPWRPAEGQDTHECQ 311
Score = 254 (94.5 bits), Expect = 2.2e-20, P = 2.2e-20
Identities = 51/118 (43%), Positives = 70/118 (59%)
Query: 200 GRCKCNGHASRCIKSPQGEL-------VCECRHNTAGKDCEKCKPFFSDRPWGRATVYDA 252
G C C+GHA RC +P G VC C+HNTAG +C++C PF+++RPW A D
Sbjct: 248 GSCFCHGHADRCAPNPGGSTTAVQVNNVCVCQHNTAGPNCDRCAPFYNNRPWRPAEGQDT 307
Query: 253 NECKGGRCKCNGHASRCIKSP------QGAL--VCE-CRHNTAGKDCEKCK-PFFSDR 300
+EC+ RC CNGH+ C P QG VC+ CR +T GK+CE+C+ +F +R
Sbjct: 308 HECQ--RCDCNGHSETCHFDPAVFAASQGTNGGVCDNCRDHTEGKNCERCQLHYFRNR 363
Score = 131 (51.2 bits), Expect = 5.8e-05, Sum P(2) = 5.8e-05
Identities = 41/133 (30%), Positives = 61/133 (45%)
Query: 193 DRHKKQGGRCKCNGHASRCIKSP------QGEL--VCE-CRHNTAGKDCEKCK-PFFSDR 242
D H+ Q RC CNGH+ C P QG VC+ CR +T GK+CE+C+ +F +R
Sbjct: 306 DTHECQ--RCDCNGHSETCHFDPAVFAASQGTNGGVCDNCRDHTEGKNCERCQLHYFRNR 363
Query: 243 PWGRATVYDANECKGGRCKCNGHASRCIKSPQGALV--CECRHNTAGKDCEKCKPFFSDR 300
A +++ C C +G +P L C C+ G+ C+ CKP F+
Sbjct: 364 R-PSAPIHET--CIPCECDPDGAVQG---APCDRLTGQCVCKEYVQGERCDLCKPGFTGL 417
Query: 301 PWGRATVYDANEC 313
+ A +C
Sbjct: 418 TFANPKGCHACDC 430
Score = 43 (20.2 bits), Expect = 5.8e-05, Sum P(2) = 5.8e-05
Identities = 10/29 (34%), Positives = 16/29 (55%)
Query: 28 CYENGRPRRCIPDFVNAAFGQEVKVNSVC 56
C+ +G RC P+ + V+VN+VC
Sbjct: 250 CFCHGHADRCAPNPGGSTTA--VQVNNVC 276
>UNIPROTKB|F1NQ51 [details] [associations]
symbol:LAMA3 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0005102 "receptor binding" evidence=IEA] [GO:0005606
"laminin-1 complex" evidence=IEA] [GO:0007155 "cell adhesion"
evidence=IEA] [GO:0030155 "regulation of cell adhesion"
evidence=IEA] [GO:0030334 "regulation of cell migration"
evidence=IEA] [GO:0045995 "regulation of embryonic development"
evidence=IEA] [GO:0005610 "laminin-5 complex" evidence=IEA]
InterPro:IPR009254 InterPro:IPR010307 Pfam:PF06008 Pfam:PF06009
GO:GO:0030155 GO:GO:0007155 InterPro:IPR013032 PROSITE:PS00022
Gene3D:2.60.120.200 InterPro:IPR008985 InterPro:IPR013320
SUPFAM:SSF49899 GO:GO:0030334 InterPro:IPR002049 InterPro:IPR001791
Pfam:PF00053 Pfam:PF00054 SMART:SM00180 SMART:SM00282
PROSITE:PS01248 PROSITE:PS50027 PROSITE:PS50025 Pfam:PF02210
GO:GO:0045995 GeneTree:ENSGT00700000104140 InterPro:IPR018031
InterPro:IPR000034 InterPro:IPR008211 Pfam:PF00052 Pfam:PF00055
SMART:SM00281 SMART:SM00136 PROSITE:PS51115 PROSITE:PS51117
GO:GO:0005606 OMA:DSCQGCS GO:GO:0005610 EMBL:AADN02021360
EMBL:AADN02021358 EMBL:AADN02021359 IPI:IPI00597868
Ensembl:ENSGALT00000024287 Uniprot:F1NQ51
Length = 3356
Score = 223 (83.6 bits), Expect = 4.1e-25, Sum P(2) = 4.1e-25
Identities = 49/125 (39%), Positives = 69/125 (55%)
Query: 199 GGRCKCNGHASRC-IKSPQGELV--CECRHNTAGKDCEKCKPFFSDRPWGRATVYDANEC 255
GGRC C+GHA C KS + + CEC+HNT G+ C++C P ++ + W AT + N C
Sbjct: 293 GGRCVCHGHAEVCNAKSAENQYQFHCECQHNTCGETCDRCCPGYNQKQWQPATAGNINIC 352
Query: 256 KGGRCKCNGHASRCIKSP---------------QGALVC-ECRHNTAGKDCEKC-KPFFS 298
+ C C+GHA+ C +G VC C+HNTAG +CEKC K ++
Sbjct: 353 EP--CNCHGHATDCYYDADVDQRRESLNIHGHYEGGGVCINCQHNTAGVNCEKCAKGYY- 409
Query: 299 DRPWG 303
RP+G
Sbjct: 410 -RPYG 413
Score = 146 (56.5 bits), Expect = 4.8e-15, Sum P(2) = 4.8e-15
Identities = 26/61 (42%), Positives = 37/61 (60%)
Query: 257 GGRCKCNGHASRC-IKSPQGALV--CECRHNTAGKDCEKCKPFFSDRPWGRATVYDANEC 313
GGRC C+GHA C KS + CEC+HNT G+ C++C P ++ + W AT + N C
Sbjct: 293 GGRCVCHGHAEVCNAKSAENQYQFHCECQHNTCGETCDRCCPGYNQKQWQPATAGNINIC 352
Query: 314 K 314
+
Sbjct: 353 E 353
Score = 144 (55.7 bits), Expect = 8.0e-15, Sum P(2) = 8.0e-15
Identities = 35/103 (33%), Positives = 52/103 (50%)
Query: 202 CKCNGHASRCIKSPQGELVCECRHNTAGKDCEKCKPFFSDRPWGRATVYDANECKGGRCK 261
C CNG+++RC G+ + C++NTAG+ CE CK D +G AT C+ C
Sbjct: 1700 CNCNGNSNRC-HDGTGKCI-NCQYNTAGEKCELCK----DGYFGDAT---QGSCR--ICP 1748
Query: 262 C---NGHASRCIKSPQGALVCECRHNTAGKDCEKCKPFFSDRP 301
C N A+ C+ + G + C C+ G CE+C P + P
Sbjct: 1749 CPYTNRFATGCVANG-GEIQCLCKEGYTGVRCERCAPGYFGNP 1790
Score = 134 (52.2 bits), Expect = 4.1e-25, Sum P(2) = 4.1e-25
Identities = 45/180 (25%), Positives = 74/180 (41%)
Query: 39 PDFVNAAFGQEVKVNSVCGLES----PERYCDTSGA--------------CHVCDAGSPR 80
P + N A + + CG E PE YC G C C+AG P
Sbjct: 49 PPYFNLAETAGISATATCGEEEGGGRPELYCKLVGGPAAAPLGRAIQGQFCDYCNAGDPS 108
Query: 81 GRFPAEYLTDLNNPSNVTCWRSEAQTSVNSLSASPDNVTLTLSLGKKFELTYISLSFCPK 140
P D W+S S + V +TL LG+ F + YI + F
Sbjct: 109 KAHPITNAID----GTERWWQSPPL----SKGLKYNEVNVTLDLGQLFHVAYILIKFA-N 159
Query: 141 SIKPDSLAIYKSQDFGKSWQPLQFYS---SQCKKLYGRTATGVISRGNEQEALCTDRHKK 197
S +PD + +S DFG+++ P Q+++ + C + +G+ A + R + + +CT + +
Sbjct: 160 SPRPDLWILERSVDFGRTYTPWQYFAHSKADCLERFGKEANVPVRR--DSDVICTTEYSR 217
Score = 122 (48.0 bits), Expect = 1.9e-12, Sum P(2) = 1.9e-12
Identities = 37/118 (31%), Positives = 53/118 (44%)
Query: 202 CKCNGHASRCIKSP---------------QGELVC-ECRHNTAGKDCEKC-KPFFSDRPW 244
C C+GHA+ C +G VC C+HNTAG +CEKC K ++ RP+
Sbjct: 355 CNCHGHATDCYYDADVDQRRESLNIHGHYEGGGVCINCQHNTAGVNCEKCAKGYY--RPY 412
Query: 245 GRATVYDANECKGGRCKCNGHASRCIKSPQGALVCECRHNTAGKDCEKCKPFFSDRPW 302
G + C C C+ R +G+ C C+ N G++CE C F P+
Sbjct: 413 G-VPARAPDGCIS--CPCD--LERAEGCEEGSGRCFCKWNFQGENCEHCADGFYSFPF 465
Score = 113 (44.8 bits), Expect = 1.6e-11, Sum P(2) = 1.6e-11
Identities = 30/98 (30%), Positives = 45/98 (45%)
Query: 202 CKCNGHASR-CIKSPQ-GELVCECRHNTAGKDCEKCKPFFSDRPWGRATVYDANECKGGR 259
C+C+ SR I P G+ CEC+ N G+ C++C + P+ C+G
Sbjct: 537 CQCSPLGSRHSICEPTTGQ--CECQTNVTGRQCDRCISAAPNFPY----------CEGIN 584
Query: 260 CKCNGHASRCIKSPQGALVCECRHNTAGKDCEKCKPFF 297
+CN S + S G C+C + G C KCKP +
Sbjct: 585 SECNPSGS--VDSHSG--YCQCLQHVEGPTCSKCKPLY 618
Score = 112 (44.5 bits), Expect = 2.1e-11, Sum P(2) = 2.1e-11
Identities = 29/89 (32%), Positives = 41/89 (46%)
Query: 221 CECRHNTAGKDCEKCKPFFSDRPWGRATVYDANECKGGRCKCNGHASRCIKSPQGALVC- 279
C C AG C+ C F G ++ + C C CNG+++RC G C
Sbjct: 1667 CSCPPEYAGDSCQDCGLGFYRESKG---LF-SGRCVP--CNCNGNSNRC---HDGTGKCI 1717
Query: 280 ECRHNTAGKDCEKCKP-FFSDRPWGRATV 307
C++NTAG+ CE CK +F D G +
Sbjct: 1718 NCQYNTAGEKCELCKDGYFGDATQGSCRI 1746
Score = 109 (43.4 bits), Expect = 4.3e-11, Sum P(2) = 4.3e-11
Identities = 36/118 (30%), Positives = 55/118 (46%)
Query: 202 CKCN--G--HASR--CIKSPQGELVCECRHNTAGKDCEKCKPFFSDRPWGRATVYDANEC 255
C C+ G +A+R C K+ G+ C+C+ G+ C++C P G YD C
Sbjct: 1367 CNCSERGVVNAARPECEKN-NGQ--CKCKPGIRGRQCDRCAP-------G---TYDFPNC 1413
Query: 256 KGGRCKCNGHASRC-IKSPQGALVCECRHNTAGKDCEKCKP--FFSD--RPWGRATVY 308
CKCN + + PQ +C C+ N G +C+ C+P F+ D P G T +
Sbjct: 1414 IP--CKCNRDGTEPDVCDPQTG-ICLCKENVEGAECDICRPGSFYLDPSNPKGCTTCF 1468
Score = 105 (42.0 bits), Expect = 1.1e-10, Sum P(2) = 1.1e-10
Identities = 27/96 (28%), Positives = 38/96 (39%)
Query: 204 CNGHASRCIKSPQGEL-----VCECRHNTAGKDCEKCKPFFSDRPWGRATVYDANECKGG 258
C G S C +P G + C+C + G C KCKP + W A + C
Sbjct: 580 CEGINSEC--NPSGSVDSHSGYCQCLQHVEGPTCSKCKPLY----WNLAEE-NPEGCTAC 632
Query: 259 RCKCNGHASRCIKSPQGALVCECRHNTAGKDCEKCK 294
+C +G S + Q C C+ N G C C+
Sbjct: 633 QCDVSGTLSGVGECQQETGRCYCKSNVCGDFCNTCE 668
Score = 101 (40.6 bits), Expect = 2.9e-10, Sum P(2) = 2.9e-10
Identities = 32/106 (30%), Positives = 45/106 (42%)
Query: 202 CKCN--GHASRCIKSPQGELVCECRHNTAGKDCEKCKPFFSDRPWGRATVYDANE--CKG 257
C+C+ G S + Q C C+ N G C C+ G + + N CKG
Sbjct: 632 CQCDVSGTLSGVGECQQETGRCYCKSNVCGDFCNTCEA-------GYYALENKNYFGCKG 684
Query: 258 GRCKCNGHASRCIKSPQGALVCECRHNTAGKDCEKCKP----FFSD 299
+C G S P GA C+CR + GK C++ +P FF D
Sbjct: 685 CQCDVGGSISFACAEPSGA--CQCREHVVGKACQE-RPEKNYFFPD 727
Score = 87 (35.7 bits), Expect = 7.9e-09, Sum P(2) = 7.9e-09
Identities = 27/94 (28%), Positives = 40/94 (42%)
Query: 202 CKCNGHASRC-IKSPQGELVCECRHNTAGKDCEKCKPFFSDRPWGRATVYDANECKGGRC 260
C+CN ++ + G C CR G C+ C+P P V +A C
Sbjct: 492 CECNSVGTQPEVCDFLGR--CLCRSGVVGLQCDSCQPGHHSFP-----VCEA-------C 537
Query: 261 KCNGHASR-CIKSPQGALVCECRHNTAGKDCEKC 293
+C+ SR I P CEC+ N G+ C++C
Sbjct: 538 QCSPLGSRHSICEPTTGQ-CECQTNVTGRQCDRC 570
Score = 80 (33.2 bits), Expect = 4.2e-08, Sum P(2) = 4.2e-08
Identities = 30/105 (28%), Positives = 40/105 (38%)
Query: 200 GRCKCNGHASRCIK---SPQGELVCECRHNTAGKDCEKCKPFFSDRPWGRATVYDANECK 256
G CN H+ + SP G C CR N G+ C +C+ + P C
Sbjct: 1273 GAVPCNCHSEGSMSPTCSPLGGQ-CICRPNVIGRQCSRCQTGYYGFP-------SCKLCN 1324
Query: 257 GGRCKCNGHASRCIKSPQGAL----VCE----CRHNTAGKDCEKC 293
G+ C+ +CI P+ VCE H AG CE C
Sbjct: 1325 CGQRLCDDLTGKCICPPRTVKPKCEVCERYYFSYHPLAG--CESC 1367
Score = 77 (32.2 bits), Expect = 8.5e-08, Sum P(2) = 8.5e-08
Identities = 21/80 (26%), Positives = 32/80 (40%)
Query: 218 ELVCECRHNTAGKDCEKCKPFFSDRPWGRATVYDANECKGGRCKCNGHASRCIK---SPQ 274
+ + +C N+ D E+ F D Y+ G CN H+ + SP
Sbjct: 1238 DFITQCGGNSFHIDPERSSAFCKDSARSLVAFYN-----NGAVPCNCHSEGSMSPTCSPL 1292
Query: 275 GALVCECRHNTAGKDCEKCK 294
G C CR N G+ C +C+
Sbjct: 1293 GGQ-CICRPNVIGRQCSRCQ 1311
Score = 75 (31.5 bits), Expect = 1.4e-07, Sum P(2) = 1.4e-07
Identities = 28/106 (26%), Positives = 42/106 (39%)
Query: 202 CKCNGHASRCIKSPQGELVCECRHNTAGKDCEKCKP-FFS-------DRPWGRATVYDAN 253
C C+ R +G C C+ N G++CE C F+S D P T +
Sbjct: 425 CPCD--LERAEGCEEGSGRCFCKWNFQGENCEHCADGFYSFPFCIRKDIPVYPFTSPNPR 482
Query: 254 ECKGGR---CKCNGHASRC-IKSPQGALVCECRHNTAGKDCEKCKP 295
+ G C+CN ++ + G C CR G C+ C+P
Sbjct: 483 DAIAGDITVCECNSVGTQPEVCDFLGR--CLCRSGVVGLQCDSCQP 526
Score = 54 (24.1 bits), Expect = 1.9e-05, Sum P(2) = 1.9e-05
Identities = 27/100 (27%), Positives = 34/100 (34%)
Query: 205 NGHASRCIKSPQGELVCECRHNTAGKDCEKCKPFFSDRPWGRATV--YDANECKGGRCKC 262
N A C +G + C + G C C+P R R Y CK C C
Sbjct: 1271 NNGAVPCNCHSEGSMSPTC--SPLGGQCI-CRPNVIGRQCSRCQTGYYGFPSCK--LCNC 1325
Query: 263 NGHASRCIKSPQGALVCECRHNTAGKDCEKCKPF-FSDRP 301
R G +C R T CE C+ + FS P
Sbjct: 1326 G---QRLCDDLTGKCICPPR--TVKPKCEVCERYYFSYHP 1360
Score = 51 (23.0 bits), Expect = 3.9e-05, Sum P(2) = 3.9e-05
Identities = 33/135 (24%), Positives = 46/135 (34%)
Query: 191 CTDRHKKQGGRCKCNGHASRCIKSP--QGELVCECRHNTAGKDCEKCKPFFSDRPWGRAT 248
C++R R +C + +C P +G C T D C P +R
Sbjct: 1369 CSERGVVNAARPECEKNNGQCKCKPGIRGRQCDRCAPGTY--DFPNCIPCKCNRDGTEPD 1426
Query: 249 VYDANE----CK----GGRCK-CN-GHASRCIKSPQGALVCECRHNTAG-KDCEKCKPFF 297
V D CK G C C G +P+G C C T+ + + + F
Sbjct: 1427 VCDPQTGICLCKENVEGAECDICRPGSFYLDPSNPKGCTTCFCFGVTSSCRSTNRRRTKF 1486
Query: 298 SD-RPWGRATVYDAN 311
D R W R D N
Sbjct: 1487 VDMRNW-RLEAMDEN 1500
>MGI|MGI:99909 [details] [associations]
symbol:Lama3 "laminin, alpha 3" species:10090 "Mus musculus"
[GO:0005102 "receptor binding" evidence=IEA] [GO:0005576
"extracellular region" evidence=IEA] [GO:0005578 "proteinaceous
extracellular matrix" evidence=IEA] [GO:0005604 "basement membrane"
evidence=IDA] [GO:0005606 "laminin-1 complex" evidence=IEA]
[GO:0005608 "laminin-3 complex" evidence=ISO] [GO:0005610
"laminin-5 complex" evidence=IDA] [GO:0005913 "cell-cell adherens
junction" evidence=ISO] [GO:0007155 "cell adhesion" evidence=IEA]
[GO:0016337 "cell-cell adhesion" evidence=ISO] [GO:0030056
"hemidesmosome" evidence=ISO] [GO:0030155 "regulation of cell
adhesion" evidence=IEA] [GO:0030334 "regulation of cell migration"
evidence=IEA] [GO:0031581 "hemidesmosome assembly" evidence=ISO]
[GO:0045995 "regulation of embryonic development" evidence=IEA]
InterPro:IPR009254 InterPro:IPR010307 Pfam:PF06008 Pfam:PF06009
MGI:MGI:99909 GO:GO:0030155 GO:GO:0007155 PROSITE:PS00022
Gene3D:2.60.120.200 InterPro:IPR008985 InterPro:IPR013320
SUPFAM:SSF49899 GO:GO:0030334 PROSITE:PS01186 InterPro:IPR002049
InterPro:IPR001791 Pfam:PF00053 Pfam:PF00054 SMART:SM00180
SMART:SM00282 PROSITE:PS01248 PROSITE:PS50027 PROSITE:PS50025
Pfam:PF02210 GO:GO:0045995 eggNOG:NOG292643 InterPro:IPR018031
InterPro:IPR000034 InterPro:IPR008211 Pfam:PF00052 Pfam:PF00055
SMART:SM00281 SMART:SM00136 PROSITE:PS51115 PROSITE:PS51117
GO:GO:0005606 HOVERGEN:HBG052300 GO:GO:0005610 EMBL:AJ293592
EMBL:U88353 EMBL:X84014 EMBL:X84013 EMBL:L20478 IPI:IPI00125058
IPI:IPI00988354 UniGene:Mm.42012 ProteinModelPortal:Q61789
SMR:Q61789 STRING:Q61789 PhosphoSite:Q61789 PaxDb:Q61789
PRIDE:Q61789 UCSC:uc008ecf.2 UCSC:uc008ech.1 HOGENOM:HOG000048708
CleanEx:MM_LAMA3 Genevestigator:Q61789
GermOnline:ENSMUSG00000024421 Uniprot:Q61789
Length = 3333
Score = 226 (84.6 bits), Expect = 8.9e-25, Sum P(2) = 8.9e-25
Identities = 51/123 (41%), Positives = 65/123 (52%)
Query: 199 GGRCKCNGHASRC-IKSPQGELVCECRHNTAGKDCEKCKPFFSDRPWGRATVYDANECKG 257
GGRC CNGHA C +P+ + CEC+H+T G C +C ++ R W A NEC+
Sbjct: 293 GGRCVCNGHAEACSADNPEKQFRCECQHHTCGDTCNRCCAGYNQRRWQPAGQEQHNECEA 352
Query: 258 GRCKCNGHASRCIKSP-----QGAL----------VC-ECRHNTAGKDCEKC-KPFFSDR 300
C C+GHA C P Q +L VC C+HNTAG +CEKC K +F R
Sbjct: 353 --CNCHGHAVDCYYDPDVEHQQASLNSKGVYAGGGVCINCQHNTAGVNCEKCAKGYF--R 408
Query: 301 PWG 303
P G
Sbjct: 409 PHG 411
Score = 154 (59.3 bits), Expect = 6.2e-15, Sum P(2) = 6.2e-15
Identities = 35/102 (34%), Positives = 52/102 (50%)
Query: 202 CKCNGHASRCIKSPQGELVC-ECRHNTAGKDCEKCKPFFSDRPWGRATVYDANECKGGRC 260
C CNGH++RC G +C C+HNTAG+ CE+C+ +G A ++ + C+ C
Sbjct: 1687 CNCNGHSNRC---QDGSGICINCQHNTAGEHCERCQAGH----YGNA-IHGS--CRVCPC 1736
Query: 261 K-CNGHASRCIKSPQGALVCECRHNTAGKDCEKCKPFFSDRP 301
N A+ C GA+ C C+ G CE+C P + P
Sbjct: 1737 PHTNSFATGCAVDG-GAVRCACKPGYTGTQCERCAPGYFGNP 1777
Score = 144 (55.7 bits), Expect = 8.6e-14, Sum P(2) = 8.6e-14
Identities = 25/59 (42%), Positives = 33/59 (55%)
Query: 257 GGRCKCNGHASRC-IKSPQGALVCECRHNTAGKDCEKCKPFFSDRPWGRATVYDANECK 314
GGRC CNGHA C +P+ CEC+H+T G C +C ++ R W A NEC+
Sbjct: 293 GGRCVCNGHAEACSADNPEKQFRCECQHHTCGDTCNRCCAGYNQRRWQPAGQEQHNECE 351
Score = 141 (54.7 bits), Expect = 1.9e-13, Sum P(2) = 1.9e-13
Identities = 31/90 (34%), Positives = 46/90 (51%)
Query: 208 ASRCIKSPQGELV--CECRHNTAGKDCEKCKPFFSDRPWGRATVYDANECKGGRCKCNGH 265
AS P+ LV C C + G C+ C+P + W ++ C C CNGH
Sbjct: 1639 ASDTGSGPRAHLVEMCACPPDYTGDSCQGCRPGYY---WDNKSL-PVGRCVP--CNCNGH 1692
Query: 266 ASRCIKSPQGALVC-ECRHNTAGKDCEKCK 294
++RC G+ +C C+HNTAG+ CE+C+
Sbjct: 1693 SNRC---QDGSGICINCQHNTAGEHCERCQ 1719
Score = 129 (50.5 bits), Expect = 4.3e-12, Sum P(2) = 4.3e-12
Identities = 41/118 (34%), Positives = 53/118 (44%)
Query: 202 CKCNGHASRCIKSP-----QGEL----------VC-ECRHNTAGKDCEKC-KPFFSDRPW 244
C C+GHA C P Q L VC C+HNTAG +CEKC K +F RP
Sbjct: 353 CNCHGHAVDCYYDPDVEHQQASLNSKGVYAGGGVCINCQHNTAGVNCEKCAKGYF--RPH 410
Query: 245 GRATVYDANECKGGRCKCNGHASRCIKSPQGALVCECRHNTAGKDCEKCKPFFSDRPW 302
G V + C C C+ R QG+ C C+ N +G CE C + + P+
Sbjct: 411 G-VPVDALHGCIP--CSCD--PERADDCDQGSGHCHCKPNFSGDYCETCADGYYNFPF 463
Score = 124 (48.7 bits), Expect = 8.9e-25, Sum P(2) = 8.9e-25
Identities = 34/130 (26%), Positives = 61/130 (46%)
Query: 71 CHVCDAGSPRGRFPAEYLTDLNNPSNVTCWRSEAQTSVNSLSASPDNVTLTLSLGKKFEL 130
C C++ R PA + D + W+S +S + V LTL LG+ F +
Sbjct: 99 CDYCNSEDSRKAHPASHAID----GSERWWQSPPLSS----GTQYNQVNLTLDLGQLFHV 150
Query: 131 TYISLSFCPKSIKPDSLAIYKSQDFGKSWQPLQFYSSQ---CKKLYGRTATGVISRGNEQ 187
YI + F S +PD + +S DFG ++ P Q+++ C + +G+ A I++ +
Sbjct: 151 AYILIKFA-NSPRPDLWILERSVDFGSTYSPWQYFAHSRRDCVEQFGQEANMAITQ--DD 207
Query: 188 EALCTDRHKK 197
+ LC + +
Sbjct: 208 QMLCVTEYSR 217
Score = 104 (41.7 bits), Expect = 1.8e-09, Sum P(2) = 1.8e-09
Identities = 26/94 (27%), Positives = 44/94 (46%)
Query: 202 CKCN--GHASRCIKSPQGELVCECRHNTAGKDCEKCKP-FFSDRPWGRATVYDANECKGG 258
C+C+ G S + Q + C C+ + G C+ C+ FFS ++ + C+G
Sbjct: 628 CQCHEAGTLSGIGECGQEDGDCSCKAHVTGDACDTCEDGFFSLE---KSNYFG---CQGC 681
Query: 259 RCKCNGHASRCIKSPQGALVCECRHNTAGKDCEK 292
+C G + P G VC+CR + GK C++
Sbjct: 682 QCDIGGALTTMCSGPSG--VCQCREHVEGKQCQR 713
Score = 101 (40.6 bits), Expect = 3.7e-09, Sum P(2) = 3.7e-09
Identities = 24/96 (25%), Positives = 39/96 (40%)
Query: 202 CKCNGHASRCIKSPQGELVCECRHNTAGKDCEKCKPFFSDRPWGRATVYDANECKGGRCK 261
C+C+ S + G C+C G+ C++C + YD C+G
Sbjct: 533 CQCSTIGSYPVPCDPGNGQCDCLPGITGRQCDRCL----------SGAYDFPYCQGSGSV 582
Query: 262 CNGHASRCIKSPQGALVCECRHNTAGKDCEKCKPFF 297
C H + + S G C+C+ + A C CKP +
Sbjct: 583 C--HPAGTLDSSLG--YCQCKQHVASPTCSVCKPLY 614
Score = 96 (38.9 bits), Expect = 1.2e-08, Sum P(2) = 1.2e-08
Identities = 29/101 (28%), Positives = 40/101 (39%)
Query: 204 CNGHASRCIKSPQGEL-----VCECRHNTAGKDCEKCKPFFSDRPWGRATVYDANECKGG 258
C G S C P G L C+C+ + A C CKP + W A + C
Sbjct: 576 CQGSGSVC--HPAGTLDSSLGYCQCKQHVASPTCSVCKPLY----WNLAKE-NPRGCSEC 628
Query: 259 RCKCNGHASRCIKSPQGALVCECRHNTAGKDCEKCKP-FFS 298
+C G S + Q C C+ + G C+ C+ FFS
Sbjct: 629 QCHEAGTLSGIGECGQEDGDCSCKAHVTGDACDTCEDGFFS 669
Score = 84 (34.6 bits), Expect = 2.1e-07, Sum P(2) = 2.1e-07
Identities = 22/95 (23%), Positives = 37/95 (38%)
Query: 202 CKC---NGHASRCIKSPQGELVCECRHNTAGKDCEKCKPFFSDRPWGRATVYDANECKGG 258
C C N A+ C G + C C+ G CE+C P + +G + + C+
Sbjct: 1734 CPCPHTNSFATGCAVDG-GAVRCACKPGYTGTQCERCAPGY----FGNPQKFGGS-CQPC 1787
Query: 259 RCKCNGHASRCIKSPQGALVCECRHNTAGKDCEKC 293
C NG C + E + + ++C+ C
Sbjct: 1788 NCNSNGQLGPCDPLTGDCVNQEPKDGSPAEECDDC 1822
Score = 82 (33.9 bits), Expect = 3.3e-07, Sum P(2) = 3.3e-07
Identities = 23/83 (27%), Positives = 34/83 (40%)
Query: 221 CECRHNTAGKDCEKCKPFFSDRPWGRATVYDANECKGGRCKCNGHASR-CIKSPQ-GALV 278
C C+ G+ C+KC P P +C C CN + + P+ GA
Sbjct: 1376 CRCKPRVTGQQCDKCAPGLLPVPL---------KCVP--CSCNRDGTEPSVCDPETGA-- 1422
Query: 279 CECRHNTAGKDCEKCKP--FFSD 299
C C+ N G C+ C+ F+ D
Sbjct: 1423 CMCKENVEGPQCQLCREGSFYLD 1445
Score = 79 (32.9 bits), Expect = 6.7e-07, Sum P(2) = 6.7e-07
Identities = 26/102 (25%), Positives = 40/102 (39%)
Query: 202 CKCNGHASRCIKSPQGELVCECRHNTAGKDCEKCKPFFSDRPWG-RATVYDANECKGGRC 260
C C+ R QG C C+ N +G CE C + + P+ R V+ N
Sbjct: 423 CSCD--PERADDCDQGSGHCHCKPNFSGDYCETCADGYYNFPFCLRIPVFP-NYTPSPED 479
Query: 261 KCNGHASRCIKSPQGAL--VCE------CRHNTAGKDCEKCK 294
G+ C + +G L +C+ CR G C+ C+
Sbjct: 480 PVAGNIKGCDCNLEGVLPEICDDRGRCLCRPGVEGPQCDSCR 521
Score = 74 (31.1 bits), Expect = 2.2e-06, Sum P(2) = 2.2e-06
Identities = 20/82 (24%), Positives = 31/82 (37%)
Query: 221 CECRHNTAGKDCEKCKPFFSDRPWGRATVYDANECKGGRCKCNGHASRCIKSPQGALVCE 280
C CR G C+ C R+ Y C+ C+C+ S + G C+
Sbjct: 506 CLCRPGVEGPQCDSC----------RSGSYSFPICQA--CQCSTIGSYPVPCDPGNGQCD 553
Query: 281 CRHNTAGKDCEKCKPFFSDRPW 302
C G+ C++C D P+
Sbjct: 554 CLPGITGRQCDRCLSGAYDFPY 575
Score = 72 (30.4 bits), Expect = 5.1e-07, Sum P(3) = 5.1e-07
Identities = 13/37 (35%), Positives = 19/37 (51%)
Query: 198 QGGRCKCNGHASRCIKSPQGELVCECRHNTAGKDCEK 234
QG +C G + P G VC+CR + GK C++
Sbjct: 679 QGCQCDIGGALTTMCSGPSG--VCQCREHVEGKQCQR 713
Score = 60 (26.2 bits), Expect = 7.9e-06, Sum P(3) = 7.9e-06
Identities = 17/66 (25%), Positives = 28/66 (42%)
Query: 202 CKCNGHASR-CIKSPQGELVCECRHNTAGKDCEKCKP--FFSD--RPWG--RATVYDAN- 253
C CN + + P+ C C+ N G C+ C+ F+ D P G + + N
Sbjct: 1404 CSCNRDGTEPSVCDPETG-ACMCKENVEGPQCQLCREGSFYLDPTNPKGCTKCFCFGVNT 1462
Query: 254 ECKGGR 259
+C+ R
Sbjct: 1463 DCQSSR 1468
Score = 53 (23.7 bits), Expect = 5.1e-07, Sum P(3) = 5.1e-07
Identities = 16/52 (30%), Positives = 23/52 (44%)
Query: 266 ASRCIKSPQGALV--CECRHNTAGKDCEKCKP-FFSDR---PWGRATVYDAN 311
AS P+ LV C C + G C+ C+P ++ D P GR + N
Sbjct: 1639 ASDTGSGPRAHLVEMCACPPDYTGDSCQGCRPGYYWDNKSLPVGRCVPCNCN 1690
Score = 38 (18.4 bits), Expect = 4.7e-06, Sum P(2) = 4.7e-06
Identities = 7/22 (31%), Positives = 10/22 (45%)
Query: 65 CDTSGACHVCDAGSPRGRFPAE 86
C +G C A +P +F E
Sbjct: 296 CVCNGHAEACSADNPEKQFRCE 317
>RGD|1307089 [details] [associations]
symbol:Ntng2 "netrin G2" species:10116 "Rattus norvegicus"
[GO:0005886 "plasma membrane" evidence=ISO] [GO:0007409
"axonogenesis" evidence=IEA;ISO] [GO:0046658 "anchored to plasma
membrane" evidence=IEA;ISO] InterPro:IPR000742 Pfam:PF00008
PROSITE:PS50026 SMART:SM00181 RGD:1307089 InterPro:IPR013032
PROSITE:PS00022 PROSITE:PS01186 InterPro:IPR002049 Pfam:PF00053
SMART:SM00180 PROSITE:PS01248 PROSITE:PS50027 InterPro:IPR008211
Pfam:PF00055 SMART:SM00136 PROSITE:PS51117 EMBL:CH474001
GeneTree:ENSGT00700000104042 CTD:84628 KO:K16359 IPI:IPI00561682
RefSeq:NP_001101295.1 UniGene:Rn.218540 Ensembl:ENSRNOT00000045919
GeneID:311836 KEGG:rno:311836 UCSC:RGD:1307089 NextBio:664255
Uniprot:D4A9F4
Length = 564
Score = 195 (73.7 bits), Expect = 1.1e-24, Sum P(2) = 1.1e-24
Identities = 62/216 (28%), Positives = 97/216 (44%)
Query: 1 MHFLKLL--CVPLLIGA--VCGEKIDLNSDPCYENGRPRRCIPDFVNAAFGQEVKVNS-- 54
+H L L C+PL+ G +C + + P +E C P + +VKV
Sbjct: 2 LHLLALFLHCLPLVSGDYDICKSWVTTDEGPTWEF---YACQPKVMRLKDYVKVKVEPSG 58
Query: 55 -VCGLESPERYCDTSGA--C-HVCDAGSPRGRFPAEYLTDLNNPSNVTCWRSEAQTSVNS 110
CG + PER+C C + CDA +P P + D + T W+S S
Sbjct: 59 ITCG-DPPERFCSHENPYLCSNECDASNPDLAHPPRLMFDREDEGLATYWQSVTW----S 113
Query: 111 LSASPDNVTLTLSLGKKFELTY-ISLSFCPKSIKPDSLAIYKSQDFGKSWQPLQFYSSQC 169
SP +TLS K ELT + ++F + +P + + KS D G++WQP QFY+ C
Sbjct: 114 RYPSPLEANITLSWNKSVELTDDVVMTF--EYGRPTVMVLEKSLDNGRTWQPYQFYAEDC 171
Query: 170 KKLYGRTATGV--ISRGNEQEALCTDRHKKQGGRCK 203
+ +G +A +S + LCT+ + + G K
Sbjct: 172 MEAFGMSARRARDMSPSSAHRVLCTEEYSRWAGSKK 207
Score = 151 (58.2 bits), Expect = 1.1e-24, Sum P(2) = 1.1e-24
Identities = 29/51 (56%), Positives = 32/51 (62%)
Query: 258 GRCKCNGHASRCIKSPQGALVCECRHNTAGKDCEKCKPFFSDRPWGRATVY 308
GRCKCN HA+ C +G+L CEC HNT G DC KCK F R W RA Y
Sbjct: 285 GRCKCNLHANLCTVR-EGSLQCECEHNTTGPDCGKCKKNFRTRAW-RAGSY 333
Score = 151 (58.2 bits), Expect = 1.1e-24, Sum P(2) = 1.1e-24
Identities = 32/86 (37%), Positives = 40/86 (46%)
Query: 200 GRCKCNGHASRCIKSPQGELVCECRHNTAGKDCEKCKPFFSDRPWGRATVYDANECKGGR 259
GRCKCN HA+ C +G L CEC HNT G DC KCK F R W +
Sbjct: 285 GRCKCNLHANLCTVR-EGSLQCECEHNTTGPDCGKCKKNFRTRAWRAGSYLPLPHGSPNA 343
Query: 260 CKCNGHASRCIKSPQGALVCECRHNT 285
C G A + P A+ + + +T
Sbjct: 344 CAAAGSAFGTVTIPV-AIPSQAKDST 368
Score = 139 (54.0 bits), Expect = 2.0e-23, Sum P(2) = 2.0e-23
Identities = 35/99 (35%), Positives = 48/99 (48%)
Query: 202 CKCNGHASRCIKSPQGELV-C-ECRHNTAGKDCEKCKPFFSDRPWGRATVYDANECKGGR 259
C+C GH++RC +V C C+HNT G+ C+ C+ + G A + D N C
Sbjct: 388 CECYGHSNRCSYIDFLNVVTCVSCKHNTRGQHCQHCRLGYYRN--GSAELDDENVCI--E 443
Query: 260 CKCNGHAS---RCIKSPQGALVCECRHNTAGKDCEKCKP 295
C CN S RC ++ G CECR G C+ C P
Sbjct: 444 CNCNQIGSVHDRCNET--G--FCECREGAVGPKCDDCLP 478
Score = 92 (37.4 bits), Expect = 1.6e-18, Sum P(2) = 1.6e-18
Identities = 19/56 (33%), Positives = 29/56 (51%)
Query: 260 CKCNGHASRCIKSP-QGALVC-ECRHNTAGKDCEKCKPFFSDRPWGRATVYDANEC 313
C+C GH++RC + C C+HNT G+ C+ C+ + G A + D N C
Sbjct: 388 CECYGHSNRCSYIDFLNVVTCVSCKHNTRGQHCQHCRLGYYRN--GSAELDDENVC 441
>FB|FBgn0002526 [details] [associations]
symbol:LanA "Laminin A" species:7227 "Drosophila
melanogaster" [GO:0005604 "basement membrane" evidence=ISS;NAS;IDA]
[GO:0007417 "central nervous system development" evidence=NAS]
[GO:0007422 "peripheral nervous system development" evidence=NAS]
[GO:0005605 "basal lamina" evidence=IDA] [GO:0035001 "dorsal trunk
growth, open tracheal system" evidence=IMP] [GO:0007507 "heart
development" evidence=IMP] [GO:0009887 "organ morphogenesis"
evidence=NAS] [GO:0009888 "tissue development" evidence=NAS]
[GO:0048598 "embryonic morphogenesis" evidence=NAS] [GO:0016321
"female meiosis chromosome segregation" evidence=IMP] [GO:0007498
"mesoderm development" evidence=IEP] [GO:0007411 "axon guidance"
evidence=IMP] [GO:0030334 "regulation of cell migration"
evidence=IEA] [GO:0030155 "regulation of cell adhesion"
evidence=IEA] [GO:0005606 "laminin-1 complex" evidence=IEA]
[GO:0045995 "regulation of embryonic development" evidence=IEA]
[GO:0005102 "receptor binding" evidence=IEA] [GO:0001964 "startle
response" evidence=IMP] [GO:0031987 "locomotion involved in
locomotory behavior" evidence=IMP] [GO:0048854 "brain
morphogenesis" evidence=IMP] [GO:0002121 "inter-male aggressive
behavior" evidence=IMP] [GO:0007476 "imaginal disc-derived wing
morphogenesis" evidence=IMP] [GO:0035011 "melanotic encapsulation
of foreign target" evidence=IMP] [GO:0036062 "presynaptic
periactive zone" evidence=IDA] [GO:0045886 "negative regulation of
synaptic growth at neuromuscular junction" evidence=IMP]
InterPro:IPR009254 InterPro:IPR010307 Pfam:PF06008 Pfam:PF06009
GO:GO:0007411 GO:GO:0007507 EMBL:AE014296 GO:GO:0030155
GO:GO:0007498 GO:GO:0007155 InterPro:IPR013032 PROSITE:PS00022
Gene3D:2.60.120.200 InterPro:IPR008985 InterPro:IPR013320
SUPFAM:SSF49899 GO:GO:0030334 GO:GO:0005605 GO:GO:0002121
PROSITE:PS01186 InterPro:IPR002049 InterPro:IPR001791 Pfam:PF00053
SMART:SM00180 SMART:SM00282 PROSITE:PS01248 PROSITE:PS50027
PROSITE:PS50025 GO:GO:0007476 GO:GO:0016321 GO:GO:0048854
Pfam:PF02210 GO:GO:0031987 GO:GO:0001964 GO:GO:0045995
GO:GO:0035011 eggNOG:NOG292643 InterPro:IPR018031
InterPro:IPR000034 InterPro:IPR008211 Pfam:PF00052 Pfam:PF00055
SMART:SM00281 SMART:SM00136 PROSITE:PS51115 PROSITE:PS51117
GO:GO:0035001 GO:GO:0005606 KO:K06240 EMBL:M96388 EMBL:L07288
EMBL:M75882 PIR:S28399 RefSeq:NP_476617.1 UniGene:Dm.865
ProteinModelPortal:Q00174 SMR:Q00174 MINT:MINT-754541 STRING:Q00174
PaxDb:Q00174 PRIDE:Q00174 GeneID:38723 KEGG:dme:Dmel_CG10236
CTD:38723 FlyBase:FBgn0002526 InParanoid:Q00174 OrthoDB:EOG4KKWHR
ChiTaRS:LanA GenomeRNAi:38723 NextBio:810058 Bgee:Q00174
GermOnline:CG10236 Uniprot:Q00174
Length = 3712
Score = 210 (79.0 bits), Expect = 1.2e-23, Sum P(2) = 1.2e-23
Identities = 46/126 (36%), Positives = 63/126 (50%)
Query: 199 GGRCKCNGHASRC-IKSPQGE---LVCECRHNTAGKDCEKCKPFFSDRPWGRATVYDANE 254
GGRC CNGHA C +K P+ L C C+H+T G C +C P F + W + T
Sbjct: 270 GGRCMCNGHADTCDVKDPKSPVRILACRCQHHTCGIQCNECCPGFEQKKWRQNTNARPFN 329
Query: 255 CKGGRCKCNGHASRCIKSPQ---------------GALVCE-CRHNTAGKDCEKCKPFFS 298
C+ C C+GH++ C + G VC+ C+HNT G +C KCKP +
Sbjct: 330 CEP--CNCHGHSNECKYDEEVNRKGLSLDIHGHYDGGGVCQNCQHNTVGINCNKCKPKYY 387
Query: 299 DRPWGR 304
RP G+
Sbjct: 388 -RPKGK 392
Score = 142 (55.0 bits), Expect = 1.2e-23, Sum P(2) = 1.2e-23
Identities = 45/174 (25%), Positives = 83/174 (47%)
Query: 39 PDFVNAAFGQEVKVNSVCGLES--PERYCDTSGAC----HVCDAGSPRGRFPAEY----L 88
P + N A G+++ + CG ++ PE YC GA H+ D +G+ +Y +
Sbjct: 26 PPYFNLATGRKIYATATCGQDTDGPELYCKLVGANTEHDHI-DYSVIQGQV-CDYCDPTV 83
Query: 89 TDLNNPSNVTCWRSEA--QTSVNSLSASPDNVTLTLSLGKKFELTYISLSFCPKSIKPDS 146
+ N+P +EA Q+ S + V LT++ ++F + Y+ + S +P
Sbjct: 84 PERNHPPENAIDGTEAWWQSPPLSRGMKFNEVNLTINFEQEFHVAYLFIRM-GNSPRPGL 142
Query: 147 LAIYKSQDFGKSWQPLQFYS---SQCKKLYGRTATGVISRGNEQEALCTDRHKK 197
+ KS D+GK+W P Q +S + C+ +G+ I+R + + +CT + K
Sbjct: 143 WTLEKSTDYGKTWTPWQHFSDTPADCETYFGKDTYKPITR--DDDVICTTEYSK 194
Score = 139 (54.0 bits), Expect = 5.1e-15, Sum P(2) = 5.1e-15
Identities = 25/54 (46%), Positives = 30/54 (55%)
Query: 257 GGRCKCNGHASRCI----KSPQGALVCECRHNTAGKDCEKCKPFFSDRPWGRAT 306
GGRC CNGHA C KSP L C C+H+T G C +C P F + W + T
Sbjct: 270 GGRCMCNGHADTCDVKDPKSPVRILACRCQHHTCGIQCNECCPGFEQKKWRQNT 323
Score = 136 (52.9 bits), Expect = 1.0e-14, Sum P(2) = 1.0e-14
Identities = 37/118 (31%), Positives = 49/118 (41%)
Query: 202 CKCNGHASRCIKSPQGELVC-ECRHNTAGKDCEKCKPFFSDRPWGRATVYDANECKGGRC 260
C+CNGH+ C G +C +C+H T G CE+C + +G AT +C C
Sbjct: 1809 CECNGHSETC-DCATG--ICSKCQHGTEGDHCERCVSGY----YGNATNGTPGDCMICAC 1861
Query: 261 KC----NGHASRCIKSPQGALV-CECRHNTAGKDCEKCKPFFSDRPWGRATVYDANEC 313
N A+ C S G + CEC+ G CE C F P V EC
Sbjct: 1862 PLPFDSNNFATSCEISESGDQIHCECKPGYTGPRCESCANGFYGEPESIGQVCKPCEC 1919
Score = 115 (45.5 bits), Expect = 1.6e-12, Sum P(2) = 1.6e-12
Identities = 28/100 (28%), Positives = 44/100 (44%)
Query: 202 CKCNGHASRCIK-SPQGELVCECRHNTAGKDCEKCKPFFSDRPWGRATVYDANECKGGRC 260
C C+ H S+ + + G+ C C+ N G+ C+ CK F Y+ C+ C
Sbjct: 632 CHCDSHGSQGVSCNSDGQ--CLCQPNFDGRQCDSCKEGF----------YNFPSCEDCNC 679
Query: 261 KCNGHASR---CIKSPQGALVCECRHNTAGKDCEKCKPFF 297
G + C P G L C+C+ G+ C +CKP +
Sbjct: 680 DPAGVIDKFAGCGSVPVGEL-CKCKERVTGRICNECKPLY 718
Score = 113 (44.8 bits), Expect = 2.5e-12, Sum P(2) = 2.5e-12
Identities = 30/94 (31%), Positives = 41/94 (43%)
Query: 221 CECRHNTAGKDCEKCKPFFSDRPWGRATVYDANECKGGRCKCNGHASRCIKSPQGALVC- 279
C C +G CE C P + P G Y C C+CNGH+ C G +C
Sbjct: 1776 CSCPPGYSGHSCEDCAPGYYRDPSGPYGGY----CIP--CECNGHSETC-DCATG--ICS 1826
Query: 280 ECRHNTAGKDCEKCKPFFSDRPWGRATVYDANEC 313
+C+H T G CE+C + +G AT +C
Sbjct: 1827 KCQHGTEGDHCERCVSGY----YGNATNGTPGDC 1856
Score = 112 (44.5 bits), Expect = 3.2e-12, Sum P(2) = 3.2e-12
Identities = 26/103 (25%), Positives = 46/103 (44%)
Query: 211 CIKSPQGELVCECRHNTAGKDCEKCKPFFSDRPWGRATVYDANECKGGRCKCNGHASRCI 270
C P GEL C+C+ G+ C +CKP + W + + C+ C +G S
Sbjct: 691 CGSVPVGEL-CKCKERVTGRICNECKPLY----WN-LNISNTEGCEICDCWTDGTISALD 744
Query: 271 KSPQGALVCECRHNTAGKDCEKCKPFFSDRPWGRATVYDANEC 313
+ C C+ +T G+ C++C+ D A+++ +C
Sbjct: 745 TCTSKSGQCPCKPHTQGRRCQECRDGTFDLD--SASLFGCKDC 785
Score = 101 (40.6 bits), Expect = 4.4e-11, Sum P(2) = 4.4e-11
Identities = 29/97 (29%), Positives = 37/97 (38%)
Query: 205 NGHASRCIKSPQGELV-CECRHNTAGKDCEKCKPFFSDRPWGRATVYDANECKGGRCKCN 263
N A+ C S G+ + CEC+ G CE C F P V EC G N
Sbjct: 1868 NNFATSCEISESGDQIHCECKPGYTGPRCESCANGFYGEPESIGQVCKPCECSGN---IN 1924
Query: 264 GHASRCIKSPQGALVCECRHNTAGKDCEKCKP-FFSD 299
+ G + C +NT G C C P F+ D
Sbjct: 1925 PEDQGSCDTRTGECL-RCLNNTFGAACNLCAPGFYGD 1960
Score = 101 (40.6 bits), Expect = 4.4e-11, Sum P(2) = 4.4e-11
Identities = 29/101 (28%), Positives = 40/101 (39%)
Query: 202 CKCNGHASRCIKSPQ-GELVCECRHNTAGKDCEKCKPFFSDRPWGRATVYDANECKGGRC 260
C C+ S I G+ C C +N AGK C C A Y +C C
Sbjct: 587 CNCSSTGSSAITCDNTGK--CNCLNNFAGKQCTLCT----------AGYYSYPDCLP--C 632
Query: 261 KCNGHASRCIKSPQGALVCECRHNTAGKDCEKCKPFFSDRP 301
C+ H S+ + C C+ N G+ C+ CK F + P
Sbjct: 633 HCDSHGSQGVSCNSDGQ-CLCQPNFDGRQCDSCKEGFYNFP 672
Score = 98 (39.6 bits), Expect = 9.0e-11, Sum P(2) = 9.0e-11
Identities = 29/102 (28%), Positives = 39/102 (38%)
Query: 202 CKCN--GHASRCIKSPQGELVCECRHNTAGKDCEKCKPFFSDRPWGRATVYDANECKGGR 259
C+CN G + GE C+C N G +CE+CK + + P C
Sbjct: 495 CECNKIGSITNDCNVTTGE--CKCLTNFGGDNCERCKHGYFNYP----------TCSYCD 542
Query: 260 CKCNGHASRCIKSPQGALVCECRHNTAGKDCEKCKPFFSDRP 301
C G S G C CR G C++C P F + P
Sbjct: 543 CDNQGTESEICNKQSGQ--CICREGFGGPRCDQCLPGFYNYP 582
Score = 97 (39.2 bits), Expect = 1.1e-10, Sum P(2) = 1.1e-10
Identities = 29/99 (29%), Positives = 43/99 (43%)
Query: 202 CKCNGHAS-----RCIKSPQGELVCECRHNTAGKDCEKCKPFFSDRPWGRATVYDANECK 256
C+C+G+ + C + GE + C +NT G C C P F +G A C+
Sbjct: 1917 CECSGNINPEDQGSC-DTRTGECL-RCLNNTFGAACNLCAPGF----YGDAI--KLKNCQ 1968
Query: 257 GGRCKCNGHASRCIKSPQGALVCECRHNTAGKDCEKCKP 295
C C+ ++ G VC C N G C++CKP
Sbjct: 1969 S--CDCDDLGTQTCDPFVG--VCTCHENVIGDRCDRCKP 2003
Score = 97 (39.2 bits), Expect = 1.1e-10, Sum P(2) = 1.1e-10
Identities = 29/102 (28%), Positives = 43/102 (42%)
Query: 202 CKCNGHASRCIKSPQGELVCECRHNTAGKDCEKCKPFFSDRPWGRATVYDANECKGGRCK 261
C NG ++ G+ C C+ N AG C++C + Y ECK C+
Sbjct: 450 CNLNGTNGYHCEAESGQQ-CPCKINFAGAYCKQCAEGY----------YGFPECKA--CE 496
Query: 262 CN--GHASRCIKSPQGALVCECRHNTAGKDCEKCKPFFSDRP 301
CN G + G C+C N G +CE+CK + + P
Sbjct: 497 CNKIGSITNDCNVTTGE--CKCLTNFGGDNCERCKHGYFNYP 536
Score = 92 (37.4 bits), Expect = 3.7e-10, Sum P(2) = 3.7e-10
Identities = 28/97 (28%), Positives = 42/97 (43%)
Query: 202 CKCN--GHASRCIKSPQGELVCECRHNTAGKDCEKCKPFFSDRPWGRATVYDANECKGGR 259
C CN G A+ + CECR N G+ C+ C + + P C+ +
Sbjct: 1466 CACNPMGIANGNSQCDLFNGTCECRQNIEGRACDVCSNGYFNFP----------HCE--Q 1513
Query: 260 CKCNGHASR---CIKSPQGALVCECRHNTAGKDCEKC 293
C C+ + C K GA C C+ N G+DC++C
Sbjct: 1514 CSCHKPGTELEVCDKI-DGA--CFCKKNVVGRDCDQC 1547
Score = 80 (33.2 bits), Expect = 6.5e-09, Sum P(2) = 6.5e-09
Identities = 24/92 (26%), Positives = 33/92 (35%)
Query: 202 CKCNGHASRCIKSPQGELVCECRHNTAGKDCEKCKPFFSDRPWGRATVYDANECKGGRCK 261
C C G AS + C C+ G+ C++C D W Y+ + C C
Sbjct: 2017 CDC-GAASNSTQCDPHTGHCACKSGVTGRQCDRCAV---DH-WK----YEKDGCTP--CN 2065
Query: 262 CNGHASRCIKSPQGALVCECRHNTAGKDCEKC 293
CN SR C+C G C+ C
Sbjct: 2066 CNQGYSRGFGCNPNTGKCQCLPGVIGDRCDAC 2097
Score = 72 (30.4 bits), Expect = 4.3e-08, Sum P(2) = 4.3e-08
Identities = 17/69 (24%), Positives = 29/69 (42%)
Query: 201 RCKCNGHASRCIKSPQGELVCECRHNTAGKDCEKCKPFFSDRPWGRATVYDANECKGGRC 260
+C C+ + + + C C+ N G+DC++C G + ++N C
Sbjct: 1513 QCSCHKPGTELEVCDKIDGACFCKKNVVGRDCDQCVD-------GTYNLQESNPDGCTTC 1565
Query: 261 KCNGHASRC 269
C G SRC
Sbjct: 1566 FCFGKTSRC 1574
Score = 70 (29.7 bits), Expect = 6.9e-08, Sum P(2) = 6.9e-08
Identities = 25/94 (26%), Positives = 37/94 (39%)
Query: 202 CKCNGHAS--RCIKSPQGELVCECRHNTAGKDCEKCKPFFSDRPWGRATVYDANECKGGR 259
C+C+ S C + G CECR C+ C + P + EC+
Sbjct: 403 CQCDYFFSTGHC-EEETGN--CECRAAFQPPSCDSCAYGYYGYP-------NCRECE--- 449
Query: 260 CKCNGHASRCIKSPQGALVCECRHNTAGKDCEKC 293
C NG ++ G C C+ N AG C++C
Sbjct: 450 CNLNGTNGYHCEAESGQQ-CPCKINFAGAYCKQC 482
>UNIPROTKB|F1LPI5 [details] [associations]
symbol:Lamb3 "Protein Lamb3" species:10116 "Rattus
norvegicus" [GO:0005610 "laminin-5 complex" evidence=IEA]
[GO:0050873 "brown fat cell differentiation" evidence=IEA]
RGD:1562668 GO:GO:0050873 InterPro:IPR013032 PROSITE:PS00022
InterPro:IPR002049 Pfam:PF00053 SMART:SM00180 PROSITE:PS01248
PROSITE:PS50027 InterPro:IPR008211 Pfam:PF00055 SMART:SM00136
PROSITE:PS51117 GO:GO:0005610 GeneTree:ENSGT00620000087753
OMA:RSQMEED IPI:IPI00363443 UniGene:Rn.49634
ProteinModelPortal:F1LPI5 Ensembl:ENSRNOT00000008440 NextBio:654049
ArrayExpress:F1LPI5 Uniprot:F1LPI5
Length = 1171
Score = 283 (104.7 bits), Expect = 1.8e-23, P = 1.8e-23
Identities = 90/334 (26%), Positives = 148/334 (44%)
Query: 3 FLKLLCVPLLIGAVCGEKIDLNSDPCYENGRPRRCIPDFVNAAFG--QEVKVNSVCGLES 60
FL L +P G +C ++ PC C P + G Q ++ +S CGL
Sbjct: 5 FLLWLALP---GLLCAQQ------PCSRGA----CYPPVGDLLIGRTQLLRASSTCGLTK 51
Query: 61 PERYCDTSGA----CHVCDAGSPRGRFPAEYLTDLNNPSNVTCWRSEAQTSVNSLSASPD 116
PE YC G C CD+ PR + + + ++ + S W ++Q V SP
Sbjct: 52 PETYCTQYGQWQMKCCKCDSRLPRN-YNSHRVENVVSSSGPMRWW-QSQNDV-----SP- 103
Query: 117 NVTLTLSLGKKFELTYISLSFCPKSIKPDSLAIYKSQDFGKSWQPLQFYSSQCKKLYGRT 176
V+L L L K+ +L I + F K + P + I +S DFGK+W+ Q+ ++ C + +
Sbjct: 104 -VSLQLDLDKRMQLQDIMMDF--KGLMPAGMLIERSSDFGKTWRVYQYLATDCASTFPQV 160
Query: 177 ATGVISRGNEQEALCTDRHKK---QGGRCKCN-GHASRCIKSPQGELVCECRHNTAGK-D 231
G + + GG+ + N + I + Q + + E T + +
Sbjct: 161 HQGQPKNWQDVRCRPLSQRPNGHLTGGKVQLNLMDLASAIPASQSKKIQELGDITNLRVN 220
Query: 232 CEKCKPFFSDRPWGRATVYDANECK-GGRCKCNGHASRCIKSPQGAL----------VCE 280
K P + + + ++ + G C C+GHA RC +P G VC
Sbjct: 221 FTKLAPVPQRGSYPPSAYFAVSQLRLQGSCFCHGHADRCAPNPGGPTGSTTAVQVNDVCV 280
Query: 281 CRHNTAGKDCEKCKPFFSDRPWGRATVYDANECK 314
C+HNTAG +C++C PF+++RPW A D +EC+
Sbjct: 281 CQHNTAGPNCDRCAPFYNNRPWRPAEGQDIHECQ 314
Score = 244 (91.0 bits), Expect = 2.6e-19, P = 2.6e-19
Identities = 52/130 (40%), Positives = 75/130 (57%)
Query: 200 GRCKCNGHASRCIKSPQGEL----------VCECRHNTAGKDCEKCKPFFSDRPWGRATV 249
G C C+GHA RC +P G VC C+HNTAG +C++C PF+++RPW A
Sbjct: 248 GSCFCHGHADRCAPNPGGPTGSTTAVQVNDVCVCQHNTAGPNCDRCAPFYNNRPWRPAEG 307
Query: 250 YDANECKGGRCKCNGHASRCIKSP------QGAL--VCE-CRHNTAGKDCEKCK-PFFSD 299
D +EC+ RC CNGH+ C P QG VC+ C+ +T GK+CE+C+ +F +
Sbjct: 308 QDIHECQ--RCDCNGHSETCHFDPAVFAASQGTSGGVCDNCQDHTEGKNCERCQLHYFRN 365
Query: 300 RPWGRATVYD 309
R G A +++
Sbjct: 366 RRPG-APIHE 374
Score = 132 (51.5 bits), Expect = 3.0e-05, P = 3.0e-05
Identities = 39/118 (33%), Positives = 61/118 (51%)
Query: 193 DRHKKQGGRCKCNGHASRCIKSP------QGEL--VCE-CRHNTAGKDCEKCK-PFFSDR 242
D H+ Q RC CNGH+ C P QG VC+ C+ +T GK+CE+C+ +F +R
Sbjct: 309 DIHECQ--RCDCNGHSETCHFDPAVFAASQGTSGGVCDNCQDHTEGKNCERCQLHYFRNR 366
Query: 243 PWGRATVYDANECKGGRCKCNGHASRCIKSPQGALV--CECRHNTAGKDCEKCKPFFS 298
G A +++ C C+C+ + +P L C C+ + G+ C+ CKP F+
Sbjct: 367 RPG-APIHET--CIP--CECDPDGA-VPGAPCDRLTGQCVCKDHVQGERCDLCKPGFT 418
>UNIPROTKB|Q01635 [details] [associations]
symbol:LAMB1 "Laminin subunit beta-1" species:9031 "Gallus
gallus" [GO:0030335 "positive regulation of cell migration"
evidence=ISS] [GO:0031175 "neuron projection development"
evidence=ISS] [GO:0034446 "substrate adhesion-dependent cell
spreading" evidence=ISS] [GO:0005201 "extracellular matrix
structural constituent" evidence=ISS] [GO:0005604 "basement
membrane" evidence=ISS] [GO:0005606 "laminin-1 complex"
evidence=ISS] [GO:0005607 "laminin-2 complex" evidence=ISS]
[GO:0005615 "extracellular space" evidence=ISS] [GO:0043257
"laminin-8 complex" evidence=ISS] [GO:0043259 "laminin-10 complex"
evidence=ISS] [GO:0007162 "negative regulation of cell adhesion"
evidence=ISS] [GO:0048471 "perinuclear region of cytoplasm"
evidence=ISS] GO:GO:0048471 GO:GO:0005615 PROSITE:PS00022
GO:GO:0007162 GO:GO:0030335 InterPro:IPR002049 Pfam:PF00053
SMART:SM00180 PROSITE:PS01248 PROSITE:PS50027 GO:GO:0034446
GO:GO:0031175 GO:GO:0005201 InterPro:IPR008211 Pfam:PF00055
SMART:SM00136 PROSITE:PS51117 GO:GO:0005606 GO:GO:0043259
EMBL:L00962 IPI:IPI00593712 PIR:B45067 UniGene:Gga.53713
STRING:Q01635 eggNOG:NOG241384 HOGENOM:HOG000007552
HOVERGEN:HBG082837 InParanoid:Q01635 OrthoDB:EOG44BB1B
GO:GO:0005607 GO:GO:0043257 Uniprot:Q01635
Length = 303
Score = 187 (70.9 bits), Expect = 5.1e-23, Sum P(2) = 5.1e-23
Identities = 43/105 (40%), Positives = 57/105 (54%)
Query: 200 GRCKCNGHASRCIK----SPQGE-LV---CECRHNTAGKDCEKCKPFFSDRPWGRATVYD 251
G C C GHAS C S + E +V C CRHNT G +CE+C F+ D PW A +
Sbjct: 201 GNCFCYGHASECAPVEGFSEEVEGMVHGHCMCRHNTKGLNCEQCLDFYHDLPWRPAEGRN 260
Query: 252 ANECKGGRCKCNGHASRC-----IKSPQGAL---VCE-CRHNTAG 287
+N CK +C CNGH+++C + G VC+ C+HNT G
Sbjct: 261 SNACK--KCNCNGHSTQCHFDMAVYMATGNTSGGVCDDCQHNTGG 303
Score = 133 (51.9 bits), Expect = 6.2e-16, Sum P(2) = 6.2e-16
Identities = 27/65 (41%), Positives = 35/65 (53%)
Query: 258 GRCKCNGHASRCI------KSPQGALV--CECRHNTAGKDCEKCKPFFSDRPWGRATVYD 309
G C C GHAS C + +G + C CRHNT G +CE+C F+ D PW A +
Sbjct: 201 GNCFCYGHASECAPVEGFSEEVEGMVHGHCMCRHNTKGLNCEQCLDFYHDLPWRPAEGRN 260
Query: 310 ANECK 314
+N CK
Sbjct: 261 SNACK 265
Score = 130 (50.8 bits), Expect = 5.1e-23, Sum P(2) = 5.1e-23
Identities = 32/126 (25%), Positives = 66/126 (52%)
Query: 71 CHVCDAGSPRGRFPAEYLTDLNNPSNVTCWRSEAQTSVNSLSASP-DNVTLTLSLGKKFE 129
C +CD+ P F D + NV + + + S + +NVT+ L+L +F
Sbjct: 8 CFICDSEDP---FHDTLNPDSHRIENVVTTFAPNRLKLWWQSENGLENVTIQLNLEAEFH 64
Query: 130 LTYISLSFCPKSIKPDSLAIYKSQDFGKSWQPLQFYSSQCKKLYGRTATGVISRGNEQEA 189
T++ ++F K+ +P ++ I +S DFGK+WQ ++++ C+ + +TG + + ++
Sbjct: 65 FTHLIMTF--KTFRPAAMLIERSSDFGKTWQVYRYFAYDCESSFPGISTGPMKKVDD--I 120
Query: 190 LCTDRH 195
+C R+
Sbjct: 121 ICDSRY 126
>UNIPROTKB|G3N1H6 [details] [associations]
symbol:NTNG2 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0046658 "anchored to plasma membrane" evidence=IEA]
[GO:0007409 "axonogenesis" evidence=IEA] InterPro:IPR000742
PROSITE:PS50026 SMART:SM00181 InterPro:IPR013032 PROSITE:PS00022
GO:GO:0007409 PROSITE:PS01186 InterPro:IPR002049 Pfam:PF00053
SMART:SM00180 PROSITE:PS01248 PROSITE:PS50027 GO:GO:0046658
InterPro:IPR013111 Pfam:PF07974 InterPro:IPR008211 Pfam:PF00055
SMART:SM00136 PROSITE:PS51117 GeneTree:ENSGT00700000104042
OMA:QPRCDPA EMBL:DAAA02032274 EMBL:DAAA02032272 EMBL:DAAA02032273
Ensembl:ENSBTAT00000064483 Uniprot:G3N1H6
Length = 595
Score = 180 (68.4 bits), Expect = 1.1e-22, Sum P(2) = 1.1e-22
Identities = 60/211 (28%), Positives = 91/211 (43%)
Query: 4 LKLLCVPLLIGA--VCGEKIDLNSDPCYENGRPRRCIPDFVNAAFGQEVKVNS---VCGL 58
L L C+ L G +C + + P +E C P + +VKV CG
Sbjct: 7 LLLHCLALASGDYDICKSWVTTDEGPTWEF---YACQPKVMRLKDYVKVKVEPSGITCG- 62
Query: 59 ESPERYCDTSGA--C-HVCDAGSPRGRFPAEYLTDLNNPSNVTCWRSEAQTSVNSLSASP 115
+ PER+C C + CDA +P P + D + T W+S S SP
Sbjct: 63 DPPERFCSHENPYLCSNECDASNPDLAHPPRLMFDREDEGLATYWQSVTW----SRYPSP 118
Query: 116 DNVTLTLSLGKKFELTY-ISLSFCPKSIKPDSLAIYKSQDFGKSWQPLQFYSSQCKKLYG 174
+TLS K ELT + ++F + +P + + KS D G++WQP QFY+ C + +G
Sbjct: 119 LEANITLSWNKSVELTDDVVVTF--EYGRPTVMVLEKSLDNGRTWQPYQFYAEDCMEAFG 176
Query: 175 RTATGV--ISRGNEQEALCTDRHKKQGGRCK 203
A +S LCT+ + + G K
Sbjct: 177 MPARRARDLSASGAHRVLCTEEYSRWAGSKK 207
Score = 151 (58.2 bits), Expect = 1.1e-22, Sum P(2) = 1.1e-22
Identities = 29/51 (56%), Positives = 32/51 (62%)
Query: 258 GRCKCNGHASRCIKSPQGALVCECRHNTAGKDCEKCKPFFSDRPWGRATVY 308
GRCKCN HA+ C +G+L CEC HNT G DC KCK F R W RA Y
Sbjct: 285 GRCKCNLHANLC-SVREGSLQCECEHNTTGPDCGKCKRSFRTRSW-RAGSY 333
Score = 150 (57.9 bits), Expect = 1.5e-22, Sum P(2) = 1.5e-22
Identities = 29/51 (56%), Positives = 31/51 (60%)
Query: 200 GRCKCNGHASRCIKSPQGELVCECRHNTAGKDCEKCKPFFSDRPWGRATVY 250
GRCKCN HA+ C +G L CEC HNT G DC KCK F R W RA Y
Sbjct: 285 GRCKCNLHANLC-SVREGSLQCECEHNTTGPDCGKCKRSFRTRSW-RAGSY 333
Score = 145 (56.1 bits), Expect = 4.9e-22, Sum P(2) = 4.9e-22
Identities = 37/102 (36%), Positives = 50/102 (49%)
Query: 199 GGRCKCNGHASRCIKSPQGELV-C-ECRHNTAGKDCEKCKPFFSDRPWGRATVYDANECK 256
G C+C GH++RC +V C C+HNT G+ C+ C+ + G A + D N C
Sbjct: 415 GPDCECYGHSNRCSYIDFLNVVTCVSCKHNTRGQHCQHCRLGYYRN--GSAELDDENVCI 472
Query: 257 GGRCKCNGHAS---RCIKSPQGALVCECRHNTAGKDCEKCKP 295
C CN S RC ++ G CECR AG C+ C P
Sbjct: 473 --ECNCNQIGSVHDRCNET--G--FCECREGAAGPKCDDCLP 508
>UNIPROTKB|F1LXY9 [details] [associations]
symbol:Lama2 "Protein Lama2" species:10116 "Rattus
norvegicus" [GO:0005605 "basal lamina" evidence=IEA] [GO:0007411
"axon guidance" evidence=IEA] [GO:0032224 "positive regulation of
synaptic transmission, cholinergic" evidence=IEA] [GO:0042383
"sarcolemma" evidence=IEA] RGD:1308889 GO:GO:0007411 GO:GO:0042383
GO:GO:0005605 InterPro:IPR002049 Pfam:PF00053 SMART:SM00180
PROSITE:PS01248 PROSITE:PS50027 GO:GO:0032224 InterPro:IPR018031
InterPro:IPR000034 InterPro:IPR008211 Pfam:PF00052 Pfam:PF00055
SMART:SM00281 SMART:SM00136 PROSITE:PS51115 PROSITE:PS51117
IPI:IPI00781912 Ensembl:ENSRNOT00000061512 ArrayExpress:F1LXY9
Uniprot:F1LXY9
Length = 661
Score = 202 (76.2 bits), Expect = 1.2e-22, Sum P(2) = 1.2e-22
Identities = 49/128 (38%), Positives = 59/128 (46%)
Query: 199 GGRCKCNGHASRCIKSPQ-GELVCECRHNTAGKDCEKCKPFFSDRPWGRATVYDANECKG 257
GG C C GHA C P + CEC HNT G+ C++C P F +PW T EC+
Sbjct: 246 GGMCICYGHARACPLDPATNKSRCECEHNTCGESCDRCCPGFHQKPWRAGTFLTKTECEA 305
Query: 258 GRCKCNGHASRC-----IKSPQ----------GALVC-ECRHNTAGKDCEKC-KPFFSDR 300
C C+G A C + S G VC C HNTAG +CE C FF R
Sbjct: 306 --CNCHGKAEECYYDETVASRNLSLNIHGKYIGGGVCINCTHNTAGINCETCIDGFF--R 361
Query: 301 PWGRATVY 308
P G + Y
Sbjct: 362 PKGVSPSY 369
Score = 146 (56.5 bits), Expect = 9.6e-16, Sum P(2) = 9.6e-16
Identities = 32/88 (36%), Positives = 42/88 (47%)
Query: 228 AGKDCEKCKPFFSDRPWGRATVYDANECKGGRCKCNGHASRCIKSPQ-GALVCECRHNTA 286
A KD + P + R + +V D + GG C C GHA C P CEC HNT
Sbjct: 221 AHKDPREIDPIVTRRYY--YSVKDISV--GGMCICYGHARACPLDPATNKSRCECEHNTC 276
Query: 287 GKDCEKCKPFFSDRPWGRATVYDANECK 314
G+ C++C P F +PW T EC+
Sbjct: 277 GESCDRCCPGFHQKPWRAGTFLTKTECE 304
Score = 125 (49.1 bits), Expect = 1.2e-22, Sum P(2) = 1.2e-22
Identities = 45/175 (25%), Positives = 76/175 (43%)
Query: 39 PDFVNAAFGQEVKVNSVCGLESPERYCDT----------SGACHVCDAGS--PRGRFPAE 86
P +N A + N+ CG + PE YC + C +C+ S P R P
Sbjct: 3 PAVLNLASNALITTNATCGEKGPEMYCKLVEHVPGQPVRNPQCRICNQNSSHPYQRHPIT 62
Query: 87 YLTDLNNPSNVTCWRSEAQTSVNSLSASPDNVTLTLSLGKKFELTYISLSFCPKSIKPDS 146
D N T W+S S+ + VT+TL L + F++ Y+ + S +P +
Sbjct: 63 NAIDGKN----TWWQSP---SIKN-GVEYHYVTITLDLQQVFQIAYVIVK-AANSPRPGN 113
Query: 147 LAIYKSQDFGKSWQPLQFYS---SQCKKLYG-RTATGVISRGNEQEALCTDRHKK 197
+ +S D + ++P Q+++ ++C LY TG S + E +CT + K
Sbjct: 114 WILERSLD-DEEYKPWQYHAVTDTECLTLYNIYPRTGPPSYAKDDEVICTSFYSK 167
Score = 81 (33.6 bits), Expect = 8.8e-09, Sum P(2) = 8.8e-09
Identities = 23/72 (31%), Positives = 32/72 (44%)
Query: 202 CKCNGHASRCIKSPQGELVCECRHNTAGKDCEKCKPFFSDRPWGRATVYDANECKG-GRC 260
C C+G S G C C+ N G+DC CK +G + + N+ KG C
Sbjct: 431 CNCSGLGSTNQDPCIGP--CSCKENVEGEDCSHCK-------FGFFNLQEENQ-KGCEEC 480
Query: 261 KCNGHASRCIKS 272
C+G + RC S
Sbjct: 481 FCSGVSDRCQSS 492
Score = 80 (33.2 bits), Expect = 1.1e-08, Sum P(2) = 1.1e-08
Identities = 22/79 (27%), Positives = 33/79 (41%)
Query: 221 CECRHNTAGKDCEKCKPFFSDRPWGRATVYDANECKGGRCKCNGHASRCIKSPQGALVCE 280
C C+ G +C++C + P +C+ C C+G S G C
Sbjct: 404 CYCKPGFGGMNCDRCVRGYRGYP----------DCQP--CNCSGLGSTNQDPCIGP--CS 449
Query: 281 CRHNTAGKDCEKCK-PFFS 298
C+ N G+DC CK FF+
Sbjct: 450 CKENVEGEDCSHCKFGFFN 468
Score = 37 (18.1 bits), Expect = 0.00028, Sum P(2) = 0.00028
Identities = 7/22 (31%), Positives = 12/22 (54%)
Query: 193 DRHKKQGGRCKCNGHASRCIKS 214
+ ++K C C+G + RC S
Sbjct: 471 EENQKGCEECFCSGVSDRCQSS 492
>UNIPROTKB|F1MMK1 [details] [associations]
symbol:LAMB3 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0050873 "brown fat cell differentiation" evidence=IEA]
[GO:0005610 "laminin-5 complex" evidence=IEA] GO:GO:0050873
InterPro:IPR013032 PROSITE:PS00022 InterPro:IPR002049 Pfam:PF00053
SMART:SM00180 PROSITE:PS01248 PROSITE:PS50027 InterPro:IPR008211
Pfam:PF00055 SMART:SM00136 PROSITE:PS51117 GO:GO:0005610
GeneTree:ENSGT00620000087753 OMA:RSQMEED EMBL:DAAA02043815
EMBL:DAAA02043816 IPI:IPI00712889 UniGene:Bt.16740
Ensembl:ENSBTAT00000022005 Uniprot:F1MMK1
Length = 1172
Score = 274 (101.5 bits), Expect = 1.6e-22, P = 1.6e-22
Identities = 91/303 (30%), Positives = 141/303 (46%)
Query: 37 CIPDFVNAAFGQE--VKVNSVCGLESPERYCDTSGA----CHVCDAGSPRGRFPAEYLTD 90
C P + G+ ++ +S CGL PE YC G C CD+ + + + +
Sbjct: 26 CYPPVGDLLIGRTRFLRASSTCGLTKPETYCAQYGEWQMKCCKCDSRVAHN-YNSHQVEN 84
Query: 91 LNNPSNVTCWRSEAQTSVNSLSASPDNVTLTLSLGKKFELTYISLSFCPKSIKPDSLAIY 150
+ + S T W ++Q V SP V L L L +KF+L I + F K P L I
Sbjct: 85 VVSSSGPTRWW-QSQNDV-----SP--VFLQLDLDRKFQLQDIMMDF--KGPVPAGLLIE 134
Query: 151 KSQDFGKSWQPLQFYSSQCKKLYGRTATGVISRGNEQEALCTDRHKK-----QGGRCKCN 205
+S DFGK+WQ Q+ ++ C + G +G Q+A C ++ G + + N
Sbjct: 135 RSSDFGKTWQVYQYLAADCGSAFPWVRQGQ-PQG-WQDARCQTLPQRPNGHPNGAKVQLN 192
Query: 206 -GHASRCIKSPQGELVCECRHNTAGK-DCEKCKPFFSDRPWGRATVYDA-NECK-GGRCK 261
+ I + Q + + E T + + K P R + + Y A ++ + G C
Sbjct: 193 LMDLASGIPATQSQKIQELGEITNLRVNFTKLAPV-PQRGYHPPSAYYAVSQLRLHGSCL 251
Query: 262 CNGHASRCIKS------PQGAL----VCECRHNTAGKDCEKCKPFFSDRPWGRATVYDAN 311
C+GHA RC S P A+ VC C+HNTAG +CE+C PF+++RPW A D +
Sbjct: 252 CHGHADRCAPSSRTPASPSSAVQVHEVCVCQHNTAGPNCERCAPFYNNRPWRPAEDQDPH 311
Query: 312 ECK 314
EC+
Sbjct: 312 ECQ 314
Score = 245 (91.3 bits), Expect = 2.0e-19, P = 2.0e-19
Identities = 52/121 (42%), Positives = 71/121 (58%)
Query: 200 GRCKCNGHASRCIKS------PQGEL----VCECRHNTAGKDCEKCKPFFSDRPWGRATV 249
G C C+GHA RC S P + VC C+HNTAG +CE+C PF+++RPW A
Sbjct: 248 GSCLCHGHADRCAPSSRTPASPSSAVQVHEVCVCQHNTAGPNCERCAPFYNNRPWRPAED 307
Query: 250 YDANECKGGRCKCNGHASRCIKSP------QGAL--VCE-CRHNTAGKDCEKCK-PFFSD 299
D +EC+ RC CNGH+ C P QGA VC+ CR +T G++CE+C+ +F +
Sbjct: 308 QDPHECQ--RCDCNGHSETCHFDPAVFAASQGAHGGVCDNCRDHTEGRNCERCQLHYFRN 365
Query: 300 R 300
R
Sbjct: 366 R 366
Score = 133 (51.9 bits), Expect = 2.4e-05, P = 2.4e-05
Identities = 38/116 (32%), Positives = 56/116 (48%)
Query: 193 DRHKKQGGRCKCNGHASRCIKSP------QGEL--VCE-CRHNTAGKDCEKCK-PFFSDR 242
D H+ Q RC CNGH+ C P QG VC+ CR +T G++CE+C+ +F +R
Sbjct: 309 DPHECQ--RCDCNGHSETCHFDPAVFAASQGAHGGVCDNCRDHTEGRNCERCQLHYFRNR 366
Query: 243 PWGRATVYDANECKGGRCKCNGHASRCIKSPQGALVCECRHNTAGKDCEKCKPFFS 298
G A + + C C +G P C C+ + G+ C+ CKP F+
Sbjct: 367 RPG-APIQET--CIPCECDPDGAVPGAPCDPLTGQ-CVCKEHVQGERCDLCKPGFT 418
>UNIPROTKB|A1A4H7 [details] [associations]
symbol:MGC139448 "Uncharacterized protein" species:9913
"Bos taurus" [GO:0046658 "anchored to plasma membrane"
evidence=IEA] [GO:0007409 "axonogenesis" evidence=IEA]
InterPro:IPR000742 PROSITE:PS50026 SMART:SM00181 InterPro:IPR013032
PROSITE:PS00022 InterPro:IPR002049 Pfam:PF00053 SMART:SM00180
InterPro:IPR008211 Pfam:PF00055 SMART:SM00136 PROSITE:PS51117
GeneTree:ENSGT00700000104042 CTD:22854 eggNOG:NOG286598
HOVERGEN:HBG052676 KO:K07522 EMBL:DAAA02007617 EMBL:DAAA02007618
EMBL:DAAA02007619 EMBL:DAAA02007620 EMBL:DAAA02007621
EMBL:DAAA02007622 EMBL:DAAA02007623 EMBL:DAAA02007624 EMBL:BC126499
IPI:IPI00829534 RefSeq:NP_001073838.1 UniGene:Bt.34180
Ensembl:ENSBTAT00000019313 GeneID:787473 KEGG:bta:787473
OMA:ELAHPPD NextBio:20928482 Uniprot:A1A4H7
Length = 461
Score = 173 (66.0 bits), Expect = 2.0e-22, Sum P(2) = 2.0e-22
Identities = 49/168 (29%), Positives = 79/168 (47%)
Query: 37 CIPDFVNAAFGQEVKVNS---VCGLESPERYCDTSGA--CH-VCDAGSPRGRFPAEYLTD 90
C P+ + +VK++ CG + PE +C C+ CDA +P P E + D
Sbjct: 50 CQPESTDMTKYLKVKLDPPDITCG-DPPETFCAMGNPYMCNNECDASTPELAHPPELMFD 108
Query: 91 LNNPSNVTCWRSEAQTSVNSLSASPDNVTLTLSLGKKFELT-YISLSFCPKSIKPDSLAI 149
T W+S P V +TLS K ELT I ++F +S +PD + +
Sbjct: 109 FEGRHPSTFWQSATWKEY----PKPLQVNITLSWSKTIELTDNIVITF--ESGRPDQMIL 162
Query: 150 YKSQDFGKSWQPLQFYSSQCKKLYGRTATGV--ISRGNEQEALCTDRH 195
KS D+G++WQP Q+Y++ C + V +S+ E +CT+ +
Sbjct: 163 EKSLDYGRTWQPYQYYATDCLDAFHMDPKSVKDLSQHTVLEIICTEEY 210
Score = 153 (58.9 bits), Expect = 2.0e-22, Sum P(2) = 2.0e-22
Identities = 26/48 (54%), Positives = 30/48 (62%)
Query: 197 KQGGRCKCNGHASRCIKSPQGELVCECRHNTAGKDCEKCKPFFSDRPW 244
K GRCKCN HA+ C+ +L CEC HNT G DC KCK + RPW
Sbjct: 292 KVHGRCKCNLHATVCVYD-NSKLTCECEHNTTGPDCGKCKKNYQGRPW 338
Score = 150 (57.9 bits), Expect = 4.2e-22, Sum P(2) = 4.2e-22
Identities = 25/45 (55%), Positives = 28/45 (62%)
Query: 258 GRCKCNGHASRCIKSPQGALVCECRHNTAGKDCEKCKPFFSDRPW 302
GRCKCN HA+ C+ L CEC HNT G DC KCK + RPW
Sbjct: 295 GRCKCNLHATVCVYD-NSKLTCECEHNTTGPDCGKCKKNYQGRPW 338
>WB|WBGene00002247 [details] [associations]
symbol:lam-1 species:6239 "Caenorhabditis elegans"
[GO:0009792 "embryo development ending in birth or egg hatching"
evidence=IMP] [GO:0010171 "body morphogenesis" evidence=IMP]
[GO:0040011 "locomotion" evidence=IMP] [GO:0000003 "reproduction"
evidence=IMP] [GO:0002119 "nematode larval development"
evidence=IMP] [GO:0060465 "pharynx development" evidence=IMP]
[GO:0005604 "basement membrane" evidence=IDA] [GO:0040017 "positive
regulation of locomotion" evidence=IMP] GO:GO:0009792 GO:GO:0002119
InterPro:IPR016140 SMART:SM00499 GO:GO:0010171 GO:GO:0040011
GO:GO:0040017 GO:GO:0000003 InterPro:IPR013032 PROSITE:PS00022
PROSITE:PS01186 InterPro:IPR002049 Pfam:PF00053 SMART:SM00180
PROSITE:PS01248 PROSITE:PS50027 GO:GO:0005604 GO:GO:0060465
InterPro:IPR008211 Pfam:PF00055 SMART:SM00136 PROSITE:PS51117
HOGENOM:HOG000007552 GeneTree:ENSGT00620000087753
InterPro:IPR013015 PROSITE:PS51116 EMBL:FO080652 RefSeq:NP_500734.3
PaxDb:O44565 EnsemblMetazoa:W03F8.5 GeneID:177292
KEGG:cel:CELE_W03F8.5 UCSC:W03F8.5 CTD:177292 WormBase:W03F8.5
NextBio:896146 Uniprot:O44565
Length = 1790
Score = 273 (101.2 bits), Expect = 3.7e-22, P = 3.7e-22
Identities = 61/136 (44%), Positives = 77/136 (56%)
Query: 200 GRCKCNGHASRCIK-----SP-----QGELV---CECRHNTAGKDCEKCKPFFSDRPWGR 246
G C C GHASRCI SP + ++V CEC HNT G +CEKCK F++D PW
Sbjct: 273 GSCSCYGHASRCIPIDPHVSPNTVMERADIVHGRCECMHNTEGLNCEKCKAFYNDLPWRP 332
Query: 247 ATVYDANECKGGRCKCNGHASRC-----IKSPQGAL---VCE-CRHNTAGKDCEKCKPFF 297
A + NEC+ +C CN HA RC + G + VC+ C HNT GK+CE+CKPFF
Sbjct: 333 AIGDEKNECR--QCNCNRHALRCHFDRAVYESSGFVSGGVCDDCMHNTQGKNCEQCKPFF 390
Query: 298 SDRPWGRATVYDANEC 313
P R T+ D + C
Sbjct: 391 YRDP--RRTIDDPHVC 404
Score = 173 (66.0 bits), Expect = 7.2e-21, Sum P(2) = 7.2e-21
Identities = 70/294 (23%), Positives = 121/294 (41%)
Query: 3 FLKLLCVPLLIGAVCGEKIDLNSDPCYENGRPRRCIPDFVNAAFGQ--EVKVNSVCGLES 60
+L LL LL+ + N D C + R C P N G+ ++K S CG +
Sbjct: 7 WLGLLLSLLLVFIEAQHPLQQNEDRCQD----RSCYPITGNLLIGRKSQLKATSTCGSQG 62
Query: 61 PERYCDTSGA-----CHVCDAGS---PRGRFPAEYLTDLNNPSNVTCWRSEAQTSVNSLS 112
+R+C S C CD+ + P+ R P + N VT + +
Sbjct: 63 RQRFCIVSHLEEQTKCFYCDSRTEWKPQ-REPYRLSHRIENV--VTEVMDDKNRNWYQSE 119
Query: 113 ASPDNVTLTLSLGKKFELTYISLSFCPKSIKPDSLAIYKSQDFGKSWQPLQFYSSQCKKL 172
NV+++ L +F T++ ++F KS +P ++ I +S DFGK+WQ ++++ C
Sbjct: 120 NGAQNVSISFDLEAEFHFTHLIMTF--KSFRPAAMIIERSADFGKTWQVYRYFAYDCDSS 177
Query: 173 YGRTATGVISRGNEQEALCTDRHK----KQGGRCKCNGHASRCI-KSPQGE------LVC 221
+ G + + +CT ++ GG + + ++P + +
Sbjct: 178 FPGIPEGPPKK--HTDVICTSQYSDVAPSTGGEIVYKVISPHIVTENPYADEISTLLKIT 235
Query: 222 ECRHN-----TAGKDCEKCKPFFSDRPWGRATVYDANECKGGRCKCNGHASRCI 270
R N T G D +P ++ + +Y+ G C C GHASRCI
Sbjct: 236 NLRFNFTKLHTLGDDLLDYRPEIDEKYY--YAIYEI--VVRGSCSCYGHASRCI 285
Score = 162 (62.1 bits), Expect = 2.2e-08, P = 2.2e-08
Identities = 41/115 (35%), Positives = 57/115 (49%)
Query: 196 KKQGGRCKCNGHASRC-----IKSPQGEL---VCE-CRHNTAGKDCEKCKPFFSDRPWGR 246
K + +C CN HA RC + G + VC+ C HNT GK+CE+CKPFF P R
Sbjct: 338 KNECRQCNCNRHALRCHFDRAVYESSGFVSGGVCDDCMHNTQGKNCEQCKPFFYRDP--R 395
Query: 247 ATVYDANECKGGRCKCNGHASRCI----KSPQGALV---CECRHNTAGKDCEKCK 294
T+ D + C C G ++ I + + LV C C+ N G C++CK
Sbjct: 396 RTIDDPHVCLPCECDKAGSQNKGICEGEEDAERGLVAGKCYCKTNVDGNRCDRCK 450
Score = 154 (59.3 bits), Expect = 7.2e-21, Sum P(2) = 7.2e-21
Identities = 32/70 (45%), Positives = 38/70 (54%)
Query: 258 GRCKCNGHASRCIK-----SPQGALV--------CECRHNTAGKDCEKCKPFFSDRPWGR 304
G C C GHASRCI SP + CEC HNT G +CEKCK F++D PW
Sbjct: 273 GSCSCYGHASRCIPIDPHVSPNTVMERADIVHGRCECMHNTEGLNCEKCKAFYNDLPWRP 332
Query: 305 ATVYDANECK 314
A + NEC+
Sbjct: 333 AIGDEKNECR 342
Score = 126 (49.4 bits), Expect = 0.00023, P = 0.00023
Identities = 40/125 (32%), Positives = 59/125 (47%)
Query: 180 VISRGNEQEALCTDRHKKQG-GRCKCNGHASR---CIKSPQGELVCECRHNTAGKDCEKC 235
V+ R +Q A+ T G +C C+ S C K G+ VC G+ C +C
Sbjct: 804 VVGRRCDQCAIGTYGFGPSGCKKCDCDAVGSLGNDCDKQ-SGQCVCR-EKGIYGRQCNQC 861
Query: 236 KPFFSDRPWGRATVYDANECKGGRCKCNGHASRCIKSPQGALVCECRHNTAGKDCEKCKP 295
+P F WG EC+ C+CN HA+ C +S GA + ECR T G C++C+
Sbjct: 862 QPGF----WGFP------ECR--TCQCNDHANICDQS-SGACI-ECRDLTTGHYCDRCQD 907
Query: 296 -FFSD 299
++ D
Sbjct: 908 GYYGD 912
Score = 125 (49.1 bits), Expect = 0.00029, P = 0.00029
Identities = 32/107 (29%), Positives = 46/107 (42%)
Query: 202 CKCNGHASRCIKSPQGELVCECRHNTAGKDCEKCKP-FFSDRPWGRATVYDANECKGGRC 260
C+CN HA+ C +S G + ECR T G C++C+ ++ D G C GG
Sbjct: 874 CQCNDHANICDQS-SGACI-ECRDLTTGHYCDRCQDGYYGDPRLGVGIPCKPCPCPGGPT 931
Query: 261 KCNGHASRCIKSPQGA----LVCECRHNTAGKDCEKCKPFFSDRPWG 303
HA C G +VC C+ G+ C +C + WG
Sbjct: 932 SGYQHADTCYLRNSGNNTQDIVCNCKSGYQGERCGEC----AQNHWG 974
>UNIPROTKB|F1LZW7 [details] [associations]
symbol:Ntng1 "Protein Ntng1" species:10116 "Rattus
norvegicus" [GO:0007409 "axonogenesis" evidence=IEA] [GO:0046658
"anchored to plasma membrane" evidence=IEA] RGD:1563465
InterPro:IPR002049 Pfam:PF00053 SMART:SM00180 InterPro:IPR008211
Pfam:PF00055 SMART:SM00136 PROSITE:PS51117 IPI:IPI00564318
Ensembl:ENSRNOT00000051174 ArrayExpress:F1LZW7 Uniprot:F1LZW7
Length = 282
Score = 158 (60.7 bits), Expect = 5.2e-22, Sum P(2) = 5.2e-22
Identities = 30/76 (39%), Positives = 39/76 (51%)
Query: 197 KQGGRCKCNGHASRCIKSPQGELVCECRHNTAGKDCEKCKPFFSDRPWGRATVYDANECK 256
K GRCKCN HA+ C+ +L CEC HNT G DC KCK + RPW + +
Sbjct: 210 KVRGRCKCNLHATMCVYD-NSKLTCECEHNTTGPDCGKCKKNYQGRPWSPGSYLPIPKGT 268
Query: 257 GGRCKCNGHASRCIKS 272
C+ N C++S
Sbjct: 269 ANTCEPN---LTCLRS 281
Score = 156 (60.0 bits), Expect = 5.2e-22, Sum P(2) = 5.2e-22
Identities = 39/125 (31%), Positives = 61/125 (48%)
Query: 74 CDAGSPRGRFPAEYLTDLNNPSNVTCWRSEAQTSVNSLSASPDNVTLTLSLGKKFELT-Y 132
CDA +P P E + D T W+S P V +TLS K ELT
Sbjct: 10 CDASTPELAHPPELMFDFEGRHPSTFWQSATWKEY----PKPLQVNITLSWSKTIELTDN 65
Query: 133 ISLSFCPKSIKPDSLAIYKSQDFGKSWQPLQFYSSQCKKLYGRTATGV--ISRGNEQEAL 190
I ++F +S +PD + + KS D+G++WQP Q+Y++ C + V +S+ E +
Sbjct: 66 IVITF--ESGRPDQMILEKSLDYGRTWQPYQYYATDCLHAFHMDPKSVKDLSQHTVLEII 123
Query: 191 CTDRH 195
CT+ +
Sbjct: 124 CTEEY 128
Score = 152 (58.6 bits), Expect = 2.5e-21, Sum P(2) = 2.5e-21
Identities = 25/45 (55%), Positives = 28/45 (62%)
Query: 258 GRCKCNGHASRCIKSPQGALVCECRHNTAGKDCEKCKPFFSDRPW 302
GRCKCN HA+ C+ L CEC HNT G DC KCK + RPW
Sbjct: 213 GRCKCNLHATMCVYD-NSKLTCECEHNTTGPDCGKCKKNYQGRPW 256
>MGI|MGI:99912 [details] [associations]
symbol:Lama2 "laminin, alpha 2" species:10090 "Mus musculus"
[GO:0005102 "receptor binding" evidence=IEA] [GO:0005576
"extracellular region" evidence=IEA] [GO:0005578 "proteinaceous
extracellular matrix" evidence=IEA] [GO:0005604 "basement membrane"
evidence=ISO;IDA] [GO:0005605 "basal lamina" evidence=ISO;IDA]
[GO:0005606 "laminin-1 complex" evidence=IEA] [GO:0007155 "cell
adhesion" evidence=IEA] [GO:0007411 "axon guidance" evidence=IGI]
[GO:0030155 "regulation of cell adhesion" evidence=IEA] [GO:0030334
"regulation of cell migration" evidence=IEA] [GO:0032224 "positive
regulation of synaptic transmission, cholinergic" evidence=IMP]
[GO:0042383 "sarcolemma" evidence=IDA] [GO:0043197 "dendritic
spine" evidence=ISO] [GO:0045995 "regulation of embryonic
development" evidence=IEA] InterPro:IPR009254 InterPro:IPR010307
Pfam:PF06008 Pfam:PF06009 MGI:MGI:99912 GO:GO:0007411 GO:GO:0030155
GO:GO:0007155 GO:GO:0042383 PROSITE:PS00022 Gene3D:2.60.120.200
InterPro:IPR008985 InterPro:IPR013320 SUPFAM:SSF49899 GO:GO:0030334
GO:GO:0005605 PROSITE:PS01186 InterPro:IPR002049 InterPro:IPR001791
Pfam:PF00053 Pfam:PF00054 SMART:SM00180 SMART:SM00282
PROSITE:PS01248 PROSITE:PS50027 PROSITE:PS50025 Pfam:PF02210
GO:GO:0045995 GO:GO:0032224 InterPro:IPR018031 InterPro:IPR000034
InterPro:IPR008211 Pfam:PF00052 Pfam:PF00055 SMART:SM00281
SMART:SM00136 PROSITE:PS51115 PROSITE:PS51117 HOGENOM:HOG000293201
HOVERGEN:HBG052298 GO:GO:0005606 eggNOG:COG0419 EMBL:U12147
EMBL:X69869 EMBL:S75315 IPI:IPI00309999 PIR:I49077
UniGene:Mm.256087 PDB:1DYK PDB:1OKQ PDB:1QU0 PDB:2WJS PDBsum:1DYK
PDBsum:1OKQ PDBsum:1QU0 PDBsum:2WJS ProteinModelPortal:Q60675
SMR:Q60675 STRING:Q60675 PhosphoSite:Q60675 PaxDb:Q60675
PRIDE:Q60675 UCSC:uc007esf.1 ChiTaRS:LAMA2 EvolutionaryTrace:Q60675
CleanEx:MM_LAMA2 Genevestigator:Q60675
GermOnline:ENSMUSG00000019899 Uniprot:Q60675
Length = 3106
Score = 202 (76.2 bits), Expect = 1.4e-21, Sum P(2) = 1.4e-21
Identities = 48/127 (37%), Positives = 59/127 (46%)
Query: 199 GGRCKCNGHASRCIKSPQ-GELVCECRHNTAGKDCEKCKPFFSDRPWGRATVYDANECKG 257
GG C C GHA C P + CEC HNT G+ C++C P F +PW T +EC+
Sbjct: 280 GGMCICYGHARACPLDPATNKSRCECEHNTCGESCDRCCPGFHQKPWRAGTFLTKSECEA 339
Query: 258 GRCKCNGHASRC-----IKSPQ----------GALVC-ECRHNTAGKDCEKCKPFFSDRP 301
C C+G A C + S G VC C HNTAG +CE C F RP
Sbjct: 340 --CNCHGKAEECYYDETVASRNLSLNIHGKYIGGGVCINCTHNTAGINCETCVDGFF-RP 396
Query: 302 WGRATVY 308
G + Y
Sbjct: 397 KGVSPNY 403
Score = 147 (56.8 bits), Expect = 6.3e-15, Sum P(2) = 6.3e-15
Identities = 32/88 (36%), Positives = 43/88 (48%)
Query: 228 AGKDCEKCKPFFSDRPWGRATVYDANECKGGRCKCNGHASRCIKSPQ-GALVCECRHNTA 286
A KD + P + R + +V D + GG C C GHA C P CEC HNT
Sbjct: 255 AHKDPREIDPIVTRRYY--YSVKDISV--GGMCICYGHARACPLDPATNKSRCECEHNTC 310
Query: 287 GKDCEKCKPFFSDRPWGRATVYDANECK 314
G+ C++C P F +PW T +EC+
Sbjct: 311 GESCDRCCPGFHQKPWRAGTFLTKSECE 338
Score = 145 (56.1 bits), Expect = 1.1e-14, Sum P(2) = 1.1e-14
Identities = 31/85 (36%), Positives = 43/85 (50%)
Query: 214 SPQGELV--CECRHNTAGKDCEKCKPFF---SDRPWGRATVYDANECKGGRCKCNGHASR 268
SP L+ C+C +G CE C P F P GR C C+CNGH+S+
Sbjct: 1367 SPPAHLIERCDCPPGYSGLSCETCAPGFYRLRSEPGGRTPGPTLGTCVP--CQCNGHSSQ 1424
Query: 269 CIKSPQGALVCECRHNTAGKDCEKC 293
C P+ ++ C+H+TAG CE+C
Sbjct: 1425 C--DPETSVCQNCQHHTAGDFCERC 1447
Score = 131 (51.2 bits), Expect = 1.4e-21, Sum P(2) = 1.4e-21
Identities = 50/203 (24%), Positives = 85/203 (41%)
Query: 11 LLIGAVCGEKIDLNSDPCYENGRPRRCIPDFVNAAFGQEVKVNSVCGLESPERYCDT--- 67
LL+G + G + ++ R P +N A + N+ CG + PE YC
Sbjct: 12 LLLGTLEGSQTQRRQSQAHQQ---RGLFPAVLNLASNALITTNATCGEKGPEMYCKLVEH 68
Query: 68 -------SGACHVCDAGS--PRGRFPAEYLTDLNNPSNVTCWRSEAQTSVNSLSASPDNV 118
+ C +C+ S P R P D N T W+S S+ + V
Sbjct: 69 VPGQPVRNPQCRICNQNSSNPYQRHPITNAIDGKN----TWWQSP---SIKN-GVEYHYV 120
Query: 119 TLTLSLGKKFELTYISLSFCPKSIKPDSLAIYKSQDFGKSWQPLQFYS---SQCKKLYG- 174
T+TL L + F++ Y+ + S +P + + +S D ++P Q+++ ++C LY
Sbjct: 121 TITLDLQQVFQIAYVIVK-AANSPRPGNWILERSLD-DVEYKPWQYHAVTDTECLTLYNI 178
Query: 175 RTATGVISRGNEQEALCTDRHKK 197
TG S + E +CT + K
Sbjct: 179 YPRTGPPSYAKDDEVICTSFYSK 201
Score = 123 (48.4 bits), Expect = 2.8e-12, Sum P(2) = 2.8e-12
Identities = 30/105 (28%), Positives = 47/105 (44%)
Query: 202 CKCNGHASRCIKSPQGELVCECRHNTAGKDCEKCKPFFSDRPWGRATVYDANECKGGRCK 261
C+CNGH+S+C P+ + C+H+TAG CE+C + G N+C+ C
Sbjct: 1416 CQCNGHSSQC--DPETSVCQNCQHHTAGDFCERCALGYYGIVRGLP-----NDCQPCACP 1468
Query: 262 C----NGHASRCIKSPQGALVCE-CRHNTAGKDCEKCKPFFSDRP 301
N + C+ C C G+ CE+C P ++ P
Sbjct: 1469 LISPSNNFSPSCVLEGLEDYRCTACPRGYEGQYCERCAPGYTGSP 1513
Score = 121 (47.7 bits), Expect = 4.5e-12, Sum P(2) = 4.5e-12
Identities = 32/97 (32%), Positives = 44/97 (45%)
Query: 202 CKCNGHASRCIKSPQGELV--CE-CRHNTAGKDCEKCKPFFSDRPWGRATVYDANECKGG 258
C+CN + I L C C+ T G+ CE C +D +G A + C+
Sbjct: 861 CQCNDNLDYSIPGSCDSLSGSCLICKPGTTGRYCELC----ADGYFGDAV--NTKNCQPC 914
Query: 259 RCKCNGHASRCIKSPQGALVCECRHNTAGKDCEKCKP 295
RC NG S + G CECR N G+ C++CKP
Sbjct: 915 RCDINGSFSEDCHTRTGQ--CECRPNVQGRHCDECKP 949
Score = 108 (43.1 bits), Expect = 1.0e-10, Sum P(2) = 1.0e-10
Identities = 33/121 (27%), Positives = 46/121 (38%)
Query: 191 CTDRHKKQGGR--------CKCNGHASRCIKSPQGELVCECRHNTAGKDCEKCKPFFSDR 242
C RH++ G C+C HA C GE + C+ +T G C +C P F
Sbjct: 734 CWPRHRRVNGTIFGGICEPCQCFAHAEAC-DDITGECL-NCKDHTGGPYCNECLPGFYGD 791
Query: 243 PWGRATVYDANECKGG-RCKCNGHASRCIKSPQGALVC-ECRHNTAGKDCEKCKPFFSDR 300
P R + D C N + C L+C EC G CE+C + +
Sbjct: 792 PT-RGSPEDCQPCACPLNIPSNNFSPTCHLDRSLGLICDECPIGYTGPRCERCAEGYFGQ 850
Query: 301 P 301
P
Sbjct: 851 P 851
Score = 101 (40.6 bits), Expect = 5.3e-10, Sum P(2) = 5.3e-10
Identities = 31/114 (27%), Positives = 45/114 (39%)
Query: 202 CKCNGHASRCIK-SPQGELVCECRHNTAGKDCEKCKP-FFSDRPWGRATVYDANECKGGR 259
C CN S+ G+ C C+ AGK C++C +F+ + G C
Sbjct: 963 CNCNSFGSKSFDCEASGQ--CWCQPGVAGKKCDRCAHGYFNFQEGG---------CIA-- 1009
Query: 260 CKCNGHASRCIKSPQGALVCECRHNTAGKDCEKCKPFFSDRPWGRATVYDANEC 313
C C+ + C P+ C C NT G+ C +C P WG + V C
Sbjct: 1010 CDCSHLGNNC--DPKTGQ-CICPPNTTGEKCSECLP----NTWGHSIVTGCKVC 1056
Score = 97 (39.2 bits), Expect = 1.4e-09, Sum P(2) = 1.4e-09
Identities = 29/94 (30%), Positives = 39/94 (41%)
Query: 220 VCECRHNTAGKDCEKCKPFFSDRPWGRATVYDANECKGGRCKCNGHASRCIKSPQGALVC 279
VC+C +G CE C P R G T++ C+ C+C HA C L
Sbjct: 719 VCQCPPGYSGSSCETCWPRHR-RVNG--TIF-GGICEP--CQCFAHAEACDDITGECL-- 770
Query: 280 ECRHNTAGKDCEKCKPFFSDRPWGRATVYDANEC 313
C+ +T G C +C P F P R + D C
Sbjct: 771 NCKDHTGGPYCNECLPGFYGDPT-RGSPEDCQPC 803
Score = 96 (38.9 bits), Expect = 1.7e-09, Sum P(2) = 1.7e-09
Identities = 24/110 (21%), Positives = 45/110 (40%)
Query: 205 NGHASRCIKSPQGELVCE-CRHNTAGKDCEKCKPFFSDRPWGRATVYDANECKGGRCKCN 263
N + C+ + C C G+ CE+C P ++ P C+ C+C+
Sbjct: 1474 NNFSPSCVLEGLEDYRCTACPRGYEGQYCERCAPGYTGSPSS-----PGGSCQ--ECECD 1526
Query: 264 GHASRCIKSPQGALVCECRHNTAGKDCEKCKPFFSDRPWGRATVYDANEC 313
+ S + + +C CR G+ C+ C+ + + G V+ +EC
Sbjct: 1527 PYGSLPVPCDRVTGLCTCRPGATGRKCDGCEHWHARE--GAECVFCGDEC 1574
Score = 86 (35.3 bits), Expect = 1.9e-08, Sum P(2) = 1.9e-08
Identities = 22/79 (27%), Positives = 34/79 (43%)
Query: 221 CECRHNTAGKDCEKCKPFFSDRPWGRATVYDANECKGGRCKCNGHASRCIKSPQGALVCE 280
C C+ G +C++C + P +C+ C C+G S G C
Sbjct: 438 CHCKTGFGGVNCDRCVRGYHGYP----------DCQP--CNCSGLGSTNEDPCVGP--CS 483
Query: 281 CRHNTAGKDCEKCKP-FFS 298
C+ N G+DC +CK FF+
Sbjct: 484 CKENVEGEDCSRCKSGFFN 502
Score = 84 (34.6 bits), Expect = 2.1e-09, Sum P(3) = 2.1e-09
Identities = 23/72 (31%), Positives = 34/72 (47%)
Query: 202 CKCNGHASRCIKSPQGELVCECRHNTAGKDCEKCKPFFSDRPWGRATVYDANECKG-GRC 260
C C+G S G C C+ N G+DC +CK F + + + N+ KG C
Sbjct: 465 CNCSGLGSTNEDPCVGP--CSCKENVEGEDCSRCKSGFFN-------LQEDNQ-KGCEEC 514
Query: 261 KCNGHASRCIKS 272
C+G ++RC S
Sbjct: 515 FCSGVSNRCQSS 526
Score = 84 (34.6 bits), Expect = 3.0e-08, Sum P(2) = 3.0e-08
Identities = 35/124 (28%), Positives = 50/124 (40%)
Query: 197 KQGG--RCKCNGHASRCIKSPQ-GELVCECRHNTAGKDCEKCKPFFSDRPWGRATVYDAN 253
++GG C C+ + C P+ G+ C C NT G+ C +C P WG + V
Sbjct: 1003 QEGGCIACDCSHLGNNC--DPKTGQ--CICPPNTTGEKCSECLP----NTWGHSIVTGCK 1054
Query: 254 ECK----GGRC-KCNGHASRCIKSPQ-GALVC-EC-RHNTAGKDCEKCKPFFSDRPWGRA 305
C G +CN + +C P+ + C EC R + C C F P A
Sbjct: 1055 VCNCSTVGSLASQCNVNTGQCSCHPKFSGMKCSECSRGHWNYPLCTLCDCFL---PGTDA 1111
Query: 306 TVYD 309
T D
Sbjct: 1112 TTCD 1115
Score = 83 (34.3 bits), Expect = 3.8e-08, Sum P(2) = 3.8e-08
Identities = 31/114 (27%), Positives = 47/114 (41%)
Query: 202 CKCN--GH-ASRCIKSPQGELVCECRHNTAGKDCEKCKPFFSDRPWGRATVYDANECKGG 258
C C+ G AS+C + G+ C C +G C +C + P T+ D
Sbjct: 1056 CNCSTVGSLASQCNVNT-GQ--CSCHPKFSGMKCSECSRGHWNYPL--CTLCDCFLPGTD 1110
Query: 259 RCKCNGHASRCIKSPQGALVCECRHNTAGKDCEKCKP--FFSD--RPWGRATVY 308
C+ +C S Q C C+ N G C++C+P F D P G ++ Y
Sbjct: 1111 ATTCDLETRKCSCSDQTGQ-CSCKVNVEGVHCDRCRPGKFGLDAKNPLGCSSCY 1163
Score = 82 (33.9 bits), Expect = 3.4e-09, Sum P(3) = 3.4e-09
Identities = 23/59 (38%), Positives = 28/59 (47%)
Query: 220 VC-ECRHNTAGKDCEKCKPFFSDRPWGRATVYDANECKGGRCKCNGHASR-CIKSPQGA 276
VC C HNTAG +CE C F RP G + Y C+ C G S C+K + A
Sbjct: 373 VCINCTHNTAGINCETCVDGFF-RPKGVSPNYP-RPCQPCHCDPTGSLSEVCVKDEKYA 429
Score = 72 (30.4 bits), Expect = 5.1e-07, Sum P(2) = 5.1e-07
Identities = 14/56 (25%), Positives = 27/56 (48%)
Query: 202 CKCNGHASRCIKSPQGELVCECRHNTAGKDCEKCKPFFSDRPWGRATVYDANECKG 257
C+C+ + S + + +C CR G+ C+ C+ + + G V+ +EC G
Sbjct: 1523 CECDPYGSLPVPCDRVTGLCTCRPGATGRKCDGCEHWHARE--GAECVFCGDECTG 1576
Score = 56 (24.8 bits), Expect = 2.1e-09, Sum P(3) = 2.1e-09
Identities = 14/38 (36%), Positives = 17/38 (44%)
Query: 272 SPQGALV--CECRHNTAGKDCEKCKPFF---SDRPWGR 304
SP L+ C+C +G CE C P F P GR
Sbjct: 1367 SPPAHLIERCDCPPGYSGLSCETCAPGFYRLRSEPGGR 1404
Score = 45 (20.9 bits), Expect = 8.1e-06, Sum P(2) = 8.1e-06
Identities = 9/20 (45%), Positives = 14/20 (70%)
Query: 65 CDT-SGACHVCDAGSPRGRF 83
CD+ SG+C +C G+ GR+
Sbjct: 875 CDSLSGSCLICKPGTT-GRY 893
>ZFIN|ZDB-GENE-060118-1 [details] [associations]
symbol:lama1 "laminin, alpha 1" species:7955 "Danio
rerio" [GO:0045995 "regulation of embryonic development"
evidence=IEA] [GO:0005606 "laminin-1 complex" evidence=IEA]
[GO:0030155 "regulation of cell adhesion" evidence=IEA] [GO:0005102
"receptor binding" evidence=IEA] [GO:0007155 "cell adhesion"
evidence=IEA] [GO:0030334 "regulation of cell migration"
evidence=IEA] [GO:0005604 "basement membrane" evidence=IEA]
[GO:0043010 "camera-type eye development" evidence=IMP] [GO:0007409
"axonogenesis" evidence=IMP] [GO:0030903 "notochord development"
evidence=IMP] [GO:0048514 "blood vessel morphogenesis"
evidence=IGI] [GO:0001568 "blood vessel development" evidence=IGI]
[GO:0007634 "optokinetic behavior" evidence=IMP] [GO:0007411 "axon
guidance" evidence=IMP] [GO:0008045 "motor neuron axon guidance"
evidence=IMP] [GO:0001764 "neuron migration" evidence=IGI;IMP]
[GO:0031290 "retinal ganglion cell axon guidance" evidence=IMP]
InterPro:IPR009254 InterPro:IPR010307 Pfam:PF06008 Pfam:PF06009
ZFIN:ZDB-GENE-060118-1 GO:GO:0001764 GO:GO:0030155 GO:GO:0048514
GO:GO:0007155 Gene3D:2.60.120.200 InterPro:IPR008985
InterPro:IPR013320 SUPFAM:SSF49899 GO:GO:0043010 GO:GO:0030334
GO:GO:0008045 InterPro:IPR002049 InterPro:IPR001791 Pfam:PF00053
Pfam:PF00054 SMART:SM00180 SMART:SM00282 PROSITE:PS01248
PROSITE:PS50027 PROSITE:PS50025 GO:GO:0031290 Pfam:PF02210
GO:GO:0045995 GO:GO:0030903 InterPro:IPR018031 InterPro:IPR000034
InterPro:IPR008211 Pfam:PF00052 Pfam:PF00055 SMART:SM00281
SMART:SM00136 PROSITE:PS51115 PROSITE:PS51117 GO:GO:0007634
CTD:284217 HOVERGEN:HBG052298 KO:K05637 OrthoDB:EOG4K3KVB
GO:GO:0005606 EMBL:DQ131910 IPI:IPI00492896 RefSeq:NP_001030158.1
UniGene:Dr.94156 ProteinModelPortal:Q45H72 SMR:Q45H72 STRING:Q45H72
GeneID:569971 KEGG:dre:569971 NextBio:20889926 Uniprot:Q45H72
Length = 3075
Score = 195 (73.7 bits), Expect = 1.7e-21, Sum P(2) = 1.7e-21
Identities = 42/112 (37%), Positives = 52/112 (46%)
Query: 199 GGRCKCNGHASRCIKSP-QGELVCECRHNTAGKDCEKCKPFFSDRPWGRATVYDANECKG 257
GG C C GHA C P +L C C HNT G+ C +C P + PW T+ D N C+
Sbjct: 274 GGMCICYGHAQSCPWDPVTKKLQCVCEHNTCGESCNECCPGYHQEPWQPGTLSDGNTCE- 332
Query: 258 GRCKCNGHASRCIKSPQ---------------GALVC-ECRHNTAGKDCEKC 293
+C C+ A C + G VC CRHNTAG +CE C
Sbjct: 333 -KCNCHNKADDCFYNQTVADLKLSMNTHGQFTGGGVCVNCRHNTAGVNCETC 383
Score = 143 (55.4 bits), Expect = 2.6e-15, Sum P(2) = 2.6e-15
Identities = 25/59 (42%), Positives = 30/59 (50%)
Query: 257 GGRCKCNGHASRCIKSP-QGALVCECRHNTAGKDCEKCKPFFSDRPWGRATVYDANECK 314
GG C C GHA C P L C C HNT G+ C +C P + PW T+ D N C+
Sbjct: 274 GGMCICYGHAQSCPWDPVTKKLQCVCEHNTCGESCNECCPGYHQEPWQPGTLSDGNTCE 332
Score = 140 (54.3 bits), Expect = 1.2e-05, P = 1.2e-05
Identities = 49/165 (29%), Positives = 74/165 (44%)
Query: 138 CPKSIKPDSLAIYKSQDFGKSWQ---PLQFYSSQCKKLYGRTATGVISRGNEQEALCTDR 194
C + P +LA S +F + Q P +F QC+ Y + G E + +
Sbjct: 791 CQRCSCPLTLA---SNNFSPTCQLQAPGEFICDQCQSGYTGDKCQRCADGYFGEPVVPGQ 847
Query: 195 HKKQGGRCKCNGH-----ASRCIKSPQGELVCECRHNTAGKDCEKCKPFFSDRPWGRATV 249
C+CNG+ A RC + GE + +C +TAG CE+C+ D +G A +
Sbjct: 848 RCSP---CECNGNVDPSEAGRC-DTHTGECL-KCVGHTAGPHCERCR----DGYYGDA-I 897
Query: 250 YDANECKGGRCKCNGHASRCIKSPQGALVCECRHNTAGKDCEKCK 294
+ N C+ C NG S G CEC+HN GK C++C+
Sbjct: 898 QEKN-CQACGCYSNGSLSTICNLITGQ--CECKHNVVGKTCDRCQ 939
Score = 139 (54.0 bits), Expect = 1.7e-21, Sum P(2) = 1.7e-21
Identities = 49/186 (26%), Positives = 85/186 (45%)
Query: 28 CYENGRPRRCIPDFVNAAFGQEVKVNSVCGLESPERYCDT----------SGACHVCDAG 77
C E + R P +N A E+ N+ CG PE +C + C +CDA
Sbjct: 21 CVE-AQQRGLFPAILNLASNAEISTNATCGDPDPEMFCKLVEHVPGRRIRNPQCRICDAN 79
Query: 78 S--PRGRFPAEYLTDLNNPSNVTCWRSEAQTSVNSLSASPDNVTLTLSLGKKFELTYISL 135
S P+ + P +T+ + +N+ W+S + + VT+TL L + F++ YI +
Sbjct: 80 SQNPKEQHP---ITNAIDGTNLW-WQSPSIKNGRQFHW----VTVTLDLRQVFQVAYIII 131
Query: 136 SFCPKSIKPDSLAIYKSQDFGKSWQPLQFYS---SQCKKLYGRTAT-GVISRGNEQEALC 191
S +P + + +S D G ++QP QFY+ ++C Y T G + + E +C
Sbjct: 132 K-AANSPRPGNWILERSLD-GVNFQPWQFYAISDTECLTRYNITPRIGPPTYKRDDEVIC 189
Query: 192 TDRHKK 197
T + +
Sbjct: 190 TSYYSR 195
Score = 138 (53.6 bits), Expect = 9.5e-15, Sum P(2) = 9.5e-15
Identities = 32/107 (29%), Positives = 49/107 (45%)
Query: 202 CKCNGHASRCIKSPQGELVCECRHNTAGKDCEKCKPFFSDRPWGRATVYDANECKGGRCK 261
C+CN HA+ C GE + C HNT G C++C P F +G A+ ++C+ RC
Sbjct: 745 CECNDHATEC--DINGECL-GCAHNTTGPHCDQCLPGF----YGDASEGTPDDCQ--RCS 795
Query: 262 C------NGHASRCIKSPQGALVCE-CRHNTAGKDCEKCKPFFSDRP 301
C N + C G +C+ C+ G C++C + P
Sbjct: 796 CPLTLASNNFSPTCQLQAPGEFICDQCQSGYTGDKCQRCADGYFGEP 842
Score = 125 (49.1 bits), Expect = 2.1e-13, Sum P(2) = 2.1e-13
Identities = 34/117 (29%), Positives = 53/117 (45%)
Query: 202 CKCNGHASRCIKSPQGELVCECRHNTAGKDCEKCKPFFSDRPWGRATVYDANECKGGRCK 261
C+C+ H+ C G+ + C+HNTAG+ C C + + G +V D + C C
Sbjct: 1407 CRCSNHSQSC-DLHTGQCL-GCQHNTAGEHCHVCAAGYYGKVQG--SVSDCSLCA---CP 1459
Query: 262 CNGHA--SRCIKSPQGALVCE-CRHNTAGKDCEKCKP-FFSD--RPWGRATVYDANE 312
G + S C+ G C+ C G+ CE+C +F + P GR V +E
Sbjct: 1460 LRGQSFSSTCVLEGAGDFRCDRCEEGYEGRYCERCAVGYFGNPSEPGGRCQVCACSE 1516
Score = 123 (48.4 bits), Expect = 3.4e-13, Sum P(2) = 3.4e-13
Identities = 34/94 (36%), Positives = 43/94 (45%)
Query: 221 CECRHNTAGKDCEKCKPFFSDRPWGRATVYDANECKGGRCKCNGHASRCIKSPQGALVCE 280
CEC +G CE C P F R G ++ N C C+CN HA+ C G +
Sbjct: 712 CECPWGYSGTSCELCIPGFY-RVGG--ILFGGN-CLP--CECNDHATEC--DINGECL-G 762
Query: 281 CRHNTAGKDCEKCKP-FFSDRPWGRATVYDANEC 313
C HNT G C++C P F+ D G T D C
Sbjct: 763 CAHNTTGPHCDQCLPGFYGDASEG--TPDDCQRC 794
Score = 117 (46.2 bits), Expect = 1.4e-12, Sum P(2) = 1.4e-12
Identities = 32/92 (34%), Positives = 43/92 (46%)
Query: 220 VC-ECRHNTAGKDCEKCKPFFSDRPWGRATVYDANECKGGRCKCNGHASR-CIK-----S 272
VC CRHNTAG +CE C + RP + + Y C +C G S CI+ +
Sbjct: 367 VCVNCRHNTAGVNCETCADGYY-RPH-QVSPYAEEPCVECQCDMRGSVSPVCIRDDNHAN 424
Query: 273 PQGALV---CECRHNTAGKDCEKCKPFFSDRP 301
P L C C+ AG+ C++C F D P
Sbjct: 425 PDAGLSPGQCVCKEGFAGEKCDRCAFGFRDFP 456
Score = 108 (43.1 bits), Expect = 1.2e-11, Sum P(2) = 1.2e-11
Identities = 30/102 (29%), Positives = 42/102 (41%)
Query: 202 CKCNGHA--SRCIKSPQGELVCE-CRHNTAGKDCEKCKP-FFSD--RPWGRATVYDANEC 255
C G + S C+ G+ C+ C G+ CE+C +F + P GR V +E
Sbjct: 1458 CPLRGQSFSSTCVLEGAGDFRCDRCEEGYEGRYCERCAVGYFGNPSEPGGRCQVCACSES 1517
Query: 256 KGGRCKCNGHASRCIKSP--QGALV--CECRHNTAGKDCEKC 293
C+ H RC P +G L CE RH + C C
Sbjct: 1518 GSVHSVCDAHTGRCECKPGVRGHLCDQCEERHVLVHEQCVSC 1559
Score = 104 (41.7 bits), Expect = 3.2e-11, Sum P(2) = 3.2e-11
Identities = 27/99 (27%), Positives = 42/99 (42%)
Query: 220 VCECRHNTAGKDCEKCKPFFSDRPWGRATVYDANE-----CKGGRCKCNGHASRCIKSPQ 274
+CEC AG C++C P + + + N C C+C+ H+ C
Sbjct: 1364 ICECPPGYAGLSCQECAPGYYRQAVSELNMKGRNRPLIQPCVP--CRCSNHSQSCDLHTG 1421
Query: 275 GALVCECRHNTAGKDCEKCKPFFSDRPWGRATVYDANEC 313
L C+ HNTAG+ C C + + G +V D + C
Sbjct: 1422 QCLGCQ--HNTAGEHCHVCAAGYYGKVQG--SVSDCSLC 1456
Score = 90 (36.7 bits), Expect = 8.9e-10, Sum P(2) = 8.9e-10
Identities = 26/97 (26%), Positives = 44/97 (45%)
Query: 202 CKCN---GHASRCIKSPQGELVCECRHNTAGKDCEKCKPFFSDRPWGRATVYDANECKGG 258
C C+ +S+C S G+ VC + + G C++C + + P + + D N G
Sbjct: 1047 CNCSVVGSSSSQCDLS-SGQCVCALQFS--GLTCDRCALGYRNFP--QCSACDCNP-NGT 1100
Query: 259 RCK-CNGHASRCIKSPQGALVCECRHNTAGKDCEKCK 294
R + C+ C G C C+ N G+ C++CK
Sbjct: 1101 RAQFCDEALGVCGCEDHGQ--CSCKDNVGGRGCDECK 1135
Score = 89 (36.4 bits), Expect = 1.1e-09, Sum P(2) = 1.1e-09
Identities = 23/77 (29%), Positives = 32/77 (41%)
Query: 221 CECRHNTAGKDCEKCKPFFSDRPWGRATVYDANECKGGRCKCNGHASRCIKSPQGALVCE 280
C C+ AG+ C++C F D P C RC+CN S + + C
Sbjct: 434 CVCKEGFAGEKCDRCAFGFRDFP----------VCS--RCECNLDGSH---NTDPCMECV 478
Query: 281 CRHNTAGKDCEKCKPFF 297
C+ N G C+ CK F
Sbjct: 479 CKANVMGSHCDLCKQGF 495
Score = 83 (34.3 bits), Expect = 4.7e-09, Sum P(2) = 4.7e-09
Identities = 30/117 (25%), Positives = 41/117 (35%)
Query: 198 QGGR-CKCNGHASRCIKSPQGELVCECRHNTAGKDCEKCKPFFSDRPWGRATVYDANECK 256
+G R C+CN + S E C+C G C++C + + T D
Sbjct: 949 EGCRPCECN-QSGALSASCDEEGRCQCITGVTGDKCDRCHHGYYNFKENGCTACDCAHTH 1007
Query: 257 GGRCKCNGHASRCIKSPQGALVCECRHNTAGKDCEKCKPFFSDRPWGRATVYDANEC 313
G CNG CI C +T G CE+C + WG V C
Sbjct: 1008 GN---CNGQTGECI----------CPPHTHGLKCEQC----DEGHWGHDGVSGCKVC 1047
Score = 62 (26.9 bits), Expect = 6.8e-07, Sum P(2) = 6.8e-07
Identities = 28/109 (25%), Positives = 42/109 (38%)
Query: 198 QGGRCKCN-GHASRCIKSPQGELVCE-CRHNTAG-----KDCEKCKPFFSDRPWGRATVY 250
+ GRC + G +C+ G CE CR G K+C+ C + + +
Sbjct: 862 EAGRCDTHTGECLKCVGHTAGPH-CERCRDGYYGDAIQEKNCQACGCYSNGSLSTICNLI 920
Query: 251 DAN-ECK----GGRC-KCNGHASRCIKSPQGALVCECRHNTA-GKDCEK 292
ECK G C +C I S +G CEC + A C++
Sbjct: 921 TGQCECKHNVVGKTCDRCQ-EGYHGINSGEGCRPCECNQSGALSASCDE 968
>UNIPROTKB|Q8WTR8 [details] [associations]
symbol:NTN5 "Netrin-5" species:9606 "Homo sapiens"
[GO:0005576 "extracellular region" evidence=IEA] InterPro:IPR001134
PROSITE:PS50189 GO:GO:0005576 PROSITE:PS00022 PROSITE:PS01186
EMBL:CH471177 InterPro:IPR002049 InterPro:IPR008993 Pfam:PF00053
SMART:SM00180 SUPFAM:SSF50242 PROSITE:PS01248 PROSITE:PS50027
InterPro:IPR018933 Pfam:PF01759 HSSP:P02468 SMART:SM00643
HOGENOM:HOG000286017 EMBL:BC018654 EMBL:BC018697 EMBL:BC021210
EMBL:BC033207 IPI:IPI00102812 IPI:IPI00645833 RefSeq:NP_665806.1
UniGene:Hs.326217 ProteinModelPortal:Q8WTR8 SMR:Q8WTR8
DMDM:74730628 PaxDb:Q8WTR8 PRIDE:Q8WTR8 Ensembl:ENST00000270235
GeneID:126147 KEGG:hsa:126147 UCSC:uc002pkb.3 UCSC:uc002pkc.3
CTD:126147 GeneCards:GC19M049164 HGNC:HGNC:25208 neXtProt:NX_Q8WTR8
PharmGKB:PA164724232 eggNOG:NOG327968 HOVERGEN:HBG096704
InParanoid:Q8WTR8 OMA:GGPFLLT OrthoDB:EOG402WS1 GenomeRNAi:126147
NextBio:81704 Bgee:Q8WTR8 Genevestigator:Q8WTR8 Uniprot:Q8WTR8
Length = 489
Score = 254 (94.5 bits), Expect = 3.9e-21, P = 3.9e-21
Identities = 81/260 (31%), Positives = 115/260 (44%)
Query: 79 PRGRFPAEYLTDLNNPSNV--TCWRSEAQTSVNSLSASPD-NVTLTLSLGKKFELTYISL 135
P+GR P L + + V +C ++ A + N L A N +LTL+LG F LT +SL
Sbjct: 22 PQGR-PQFCLPPVTQLAAVAASCPQACALSPGNHLGARETCNGSLTLALGGPFLLTSVSL 80
Query: 136 SFCPKSIKPDSLAIYKSQDFGKSWQPLQFYSSQCKKLYG-RTATGVISRGNEQEALCTDR 194
FC P +L + + G W+ L + L G T + G + +
Sbjct: 81 RFCTPG--PPALILSAAWASGGPWRLLWHRPAWPGALGGPERVTFHSTPGPKATVAASHL 138
Query: 195 HKKQGG-----------RCKCNGHASRCIKSPQGELVCECRHNTAGKDCEKCKPFFSDRP 243
+ GG RC+C+GHA+RC + C CRH+T G CE C+P D P
Sbjct: 139 RVEFGGQAGLAAAGLRGRCQCHGHAARCAARARPPR-CHCRHHTTGPGCESCRPSHRDWP 197
Query: 244 WGRATVYDANECKGGRCKCNGHASRC--------IKSPQGALVCE-CRHNTAGKDCEKCK 294
W AT + C C CN HA RC + + VCE CRH+TAG+ C C+
Sbjct: 198 WRPATPRHPHPCLP--CSCNQHARRCRFNSELFRLSGGRSGGVCERCRHHTAGRHCHYCQ 255
Query: 295 PFFSDRPWGRATVYDANECK 314
P F P ++ C+
Sbjct: 256 PGFWRDP--SQPIFSRRACR 273
Score = 137 (53.3 bits), Expect = 1.1e-08, Sum P(2) = 1.1e-08
Identities = 36/113 (31%), Positives = 45/113 (39%)
Query: 192 TDRHKKQGGRCKCNGHASRC-IKSPQGEL-------VCE-CRHNTAGKDCEKCKPFFSDR 242
T RH C CN HA RC S L VCE CRH+TAG+ C C+P F
Sbjct: 202 TPRHPHPCLPCSCNQHARRCRFNSELFRLSGGRSGGVCERCRHHTAGRHCHYCQPGFWRD 261
Query: 243 PWGRATVYDANECKGGRCKCNGHASRCIKSPQGALVCECRHNTAGKDCEKCKP 295
P ++ C+ +C G G C C+ G C +C P
Sbjct: 262 P--SQPIFSRRACRACQCHPIGATGGTCNQTSGQ--CTCKLGVTGLTCNRCGP 310
Score = 63 (27.2 bits), Expect = 1.1e-08, Sum P(2) = 1.1e-08
Identities = 15/49 (30%), Positives = 21/49 (42%)
Query: 25 SDPCYE-NGRPRRCIPDFVNAAFGQEVKVNSVCGLESPERYCDTSGACH 72
+DPCY+ GRP+ C+P A C L SP + C+
Sbjct: 16 ADPCYDPQGRPQFCLPPVTQLA-AVAASCPQACAL-SPGNHLGARETCN 62
>RGD|1308889 [details] [associations]
symbol:Lama2 "laminin, alpha 2" species:10116 "Rattus
norvegicus" [GO:0003674 "molecular_function" evidence=ND]
[GO:0005102 "receptor binding" evidence=IEA] [GO:0005604 "basement
membrane" evidence=ISO] [GO:0005605 "basal lamina"
evidence=ISO;IDA] [GO:0005606 "laminin-1 complex" evidence=IEA]
[GO:0007155 "cell adhesion" evidence=IEA] [GO:0007411 "axon
guidance" evidence=ISO] [GO:0022011 "myelination in peripheral
nervous system" evidence=IEP] [GO:0030155 "regulation of cell
adhesion" evidence=IEA] [GO:0030198 "extracellular matrix
organization" evidence=IEP] [GO:0030334 "regulation of cell
migration" evidence=IEA] [GO:0032224 "positive regulation of
synaptic transmission, cholinergic" evidence=ISO] [GO:0042383
"sarcolemma" evidence=ISO] [GO:0043197 "dendritic spine"
evidence=IDA] [GO:0045995 "regulation of embryonic development"
evidence=IEA] InterPro:IPR009254 InterPro:IPR010307 Pfam:PF06008
Pfam:PF06009 RGD:1308889 GO:GO:0007411 GO:GO:0030155 GO:GO:0043197
GO:GO:0030198 GO:GO:0007155 GO:GO:0042383 Gene3D:2.60.120.200
InterPro:IPR008985 InterPro:IPR013320 SUPFAM:SSF49899 GO:GO:0030334
GO:GO:0005605 GO:GO:0022011 InterPro:IPR002049 InterPro:IPR001791
Pfam:PF00053 Pfam:PF00054 SMART:SM00180 SMART:SM00282
PROSITE:PS01248 PROSITE:PS50027 PROSITE:PS50025 Pfam:PF02210
GO:GO:0045995 GO:GO:0032224 GeneTree:ENSGT00700000104140
InterPro:IPR018031 InterPro:IPR000034 InterPro:IPR008211
Pfam:PF00052 Pfam:PF00055 SMART:SM00281 SMART:SM00136
PROSITE:PS51115 PROSITE:PS51117 GO:GO:0005606 IPI:IPI00361301
PRIDE:F1M614 Ensembl:ENSRNOT00000014917 ArrayExpress:F1M614
Uniprot:F1M614
Length = 3085
Score = 202 (76.2 bits), Expect = 6.0e-21, Sum P(2) = 6.0e-21
Identities = 49/128 (38%), Positives = 59/128 (46%)
Query: 199 GGRCKCNGHASRCIKSPQ-GELVCECRHNTAGKDCEKCKPFFSDRPWGRATVYDANECKG 257
GG C C GHA C P + CEC HNT G+ C++C P F +PW T EC+
Sbjct: 247 GGMCICYGHARACPLDPATNKSRCECEHNTCGESCDRCCPGFHQKPWRAGTFLTKTECEA 306
Query: 258 GRCKCNGHASRC-----IKSPQ----------GALVC-ECRHNTAGKDCEKC-KPFFSDR 300
C C+G A C + S G VC C HNTAG +CE C FF R
Sbjct: 307 --CNCHGKAEECYYDETVASRNLSLNIHGKYIGGGVCINCTHNTAGINCETCIDGFF--R 362
Query: 301 PWGRATVY 308
P G + Y
Sbjct: 363 PKGVSPSY 370
Score = 146 (56.5 bits), Expect = 3.5e-14, Sum P(2) = 3.5e-14
Identities = 32/88 (36%), Positives = 42/88 (47%)
Query: 228 AGKDCEKCKPFFSDRPWGRATVYDANECKGGRCKCNGHASRCIKSPQ-GALVCECRHNTA 286
A KD + P + R + +V D + GG C C GHA C P CEC HNT
Sbjct: 222 AHKDPREIDPIVTRRYY--YSVKDISV--GGMCICYGHARACPLDPATNKSRCECEHNTC 277
Query: 287 GKDCEKCKPFFSDRPWGRATVYDANECK 314
G+ C++C P F +PW T EC+
Sbjct: 278 GESCDRCCPGFHQKPWRAGTFLTKTECE 305
Score = 139 (54.0 bits), Expect = 1.5e-12, Sum P(3) = 1.5e-12
Identities = 30/85 (35%), Positives = 43/85 (50%)
Query: 214 SPQGELV--CECRHNTAGKDCEKCKPFF---SDRPWGRATVYDANECKGGRCKCNGHASR 268
SP L+ C+C +G CE C P F P GR C C+C+GH+S+
Sbjct: 1334 SPLANLIERCDCPPGYSGLSCETCAPGFYRVHSEPGGRTPGPTLGTCVP--CQCHGHSSQ 1391
Query: 269 CIKSPQGALVCECRHNTAGKDCEKC 293
C P+ ++ C+H+TAG CE+C
Sbjct: 1392 C--DPETSVCQNCQHHTAGDFCERC 1414
Score = 127 (49.8 bits), Expect = 4.8e-12, Sum P(2) = 4.8e-12
Identities = 36/103 (34%), Positives = 46/103 (44%)
Query: 199 GGRCK---CNGHASRCIKSPQGELV--CE-CRHNTAGKDCEKCKPFFSDRPWGRATVYDA 252
GG C+ CN + I L C C+ T G+ CE C +D +G A DA
Sbjct: 822 GGSCQPCLCNDNLDFSIPGSCDSLSGSCLICKPGTTGRFCELC----ADGYFGDAV--DA 875
Query: 253 NECKGGRCKCNGHASRCIKSPQGALVCECRHNTAGKDCEKCKP 295
C+ RC NG S G CECR N G+ C++CKP
Sbjct: 876 KNCQPCRCNVNGSFSEICHRKTGQ--CECRPNVQGQRCDECKP 916
Score = 127 (49.8 bits), Expect = 4.8e-12, Sum P(2) = 4.8e-12
Identities = 34/119 (28%), Positives = 48/119 (40%)
Query: 193 DRHKKQGGRCKCNGHASRCIKSPQGELVCECRHNTAGKDCEKCKPFFSDRPWGRATVYDA 252
D Q RC NG S G+ CECR N G+ C++CKP GR +
Sbjct: 874 DAKNCQPCRCNVNGSFSEICHRKTGQ--CECRPNVQGQRCDECKPETFGLQLGRGCI--- 928
Query: 253 NECKGGRCKCNGHASRCIKSPQGALVCECRHNTAGKDCEKCKPFFSDRPWGRATVYDAN 311
C CN S+ + + C C+ AGK C++C + + G T D +
Sbjct: 929 ------PCNCNSFGSKSFDC-EASGQCWCQPGVAGKKCDRCAHGYFNFQEGGCTACDCS 980
Score = 125 (49.1 bits), Expect = 6.0e-21, Sum P(2) = 6.0e-21
Identities = 45/175 (25%), Positives = 76/175 (43%)
Query: 39 PDFVNAAFGQEVKVNSVCGLESPERYCDT----------SGACHVCDAGS--PRGRFPAE 86
P +N A + N+ CG + PE YC + C +C+ S P R P
Sbjct: 4 PAVLNLASNALITTNATCGEKGPEMYCKLVEHVPGQPVRNPQCRICNQNSSHPYQRHPIT 63
Query: 87 YLTDLNNPSNVTCWRSEAQTSVNSLSASPDNVTLTLSLGKKFELTYISLSFCPKSIKPDS 146
D N T W+S S+ + VT+TL L + F++ Y+ + S +P +
Sbjct: 64 NAIDGKN----TWWQSP---SIKN-GVEYHYVTITLDLQQVFQIAYVIVK-AANSPRPGN 114
Query: 147 LAIYKSQDFGKSWQPLQFYS---SQCKKLYG-RTATGVISRGNEQEALCTDRHKK 197
+ +S D + ++P Q+++ ++C LY TG S + E +CT + K
Sbjct: 115 WILERSLD-DEEYKPWQYHAVTDTECLTLYNIYPRTGPPSYAKDDEVICTSFYSK 168
Score = 124 (48.7 bits), Expect = 1.0e-11, Sum P(2) = 1.0e-11
Identities = 38/128 (29%), Positives = 51/128 (39%)
Query: 184 GNEQEALCTDRHKKQGGR--------CKCNGHASRCIKSPQGELVCECRHNTAGKDCEKC 235
G+ EA C RH++ G C+C GHA C GE + C+ +T G C +C
Sbjct: 695 GSSCEA-CWPRHRRVNGTIFGGLCEPCQCFGHAEAC-NDVTGECL-SCKDHTGGPYCNEC 751
Query: 236 KPFFSDRPWGRATVYDANECKGG-RCKCNGHASRCIKSPQGALVC-ECRHNTAGKDCEKC 293
P F P R T D C N + C L+C EC G CE+C
Sbjct: 752 LPGFYGDPT-RGTSEDCQPCACPLNIPSNNFSPTCHLDRSLGLICDECPVGYTGPRCERC 810
Query: 294 KPFFSDRP 301
+ +P
Sbjct: 811 AEGYFGQP 818
Score = 118 (46.6 bits), Expect = 4.3e-11, Sum P(2) = 4.3e-11
Identities = 29/105 (27%), Positives = 47/105 (44%)
Query: 202 CKCNGHASRCIKSPQGELVCECRHNTAGKDCEKCKPFFSDRPWGRATVYDANECKGGRCK 261
C+C+GH+S+C P+ + C+H+TAG CE+C + G N+C+ C
Sbjct: 1383 CQCHGHSSQC--DPETSVCQNCQHHTAGDFCERCALGYYGIVRGLP-----NDCQPCACP 1435
Query: 262 C----NGHASRCIKSPQGALVCE-CRHNTAGKDCEKCKPFFSDRP 301
N + C+ C C G+ CE+C P ++ P
Sbjct: 1436 LISPSNNFSPSCVLEGLEDYRCTACPRGYEGQYCERCAPGYAGSP 1480
Score = 109 (43.4 bits), Expect = 2.5e-09, Sum P(3) = 2.5e-09
Identities = 31/94 (32%), Positives = 41/94 (43%)
Query: 220 VCECRHNTAGKDCEKCKPFFSDRPWGRATVYDANECKGGRCKCNGHASRCIKSPQGALVC 279
VC+C +G CE C P R G T++ C+ C+C GHA C G +
Sbjct: 686 VCQCPPGYSGSSCEACWPRHR-RVNG--TIF-GGLCEP--CQCFGHAEAC-NDVTGECL- 737
Query: 280 ECRHNTAGKDCEKCKPFFSDRPWGRATVYDANEC 313
C+ +T G C +C P F P R T D C
Sbjct: 738 SCKDHTGGPYCNECLPGFYGDPT-RGTSEDCQPC 770
Score = 105 (42.0 bits), Expect = 9.4e-10, Sum P(2) = 9.4e-10
Identities = 31/113 (27%), Positives = 43/113 (38%)
Query: 202 CKCNGHASRCIK-SPQGELVCECRHNTAGKDCEKCKPFFSDRPWGRATVYDANECKGGRC 260
C CN S+ G+ C C+ AGK C++C + + G T D + G
Sbjct: 930 CNCNSFGSKSFDCEASGQ--CWCQPGVAGKKCDRCAHGYFNFQEGGCTACDCSHL--GN- 984
Query: 261 KCNGHASRCIKSPQGALVCECRHNTAGKDCEKCKPFFSDRPWGRATVYDANEC 313
CN +CI C NT G+ C +C P WG + V C
Sbjct: 985 NCNPKTGQCI----------CPPNTIGEKCSECLP----NTWGHSIVTGCKVC 1023
Score = 90 (36.7 bits), Expect = 2.0e-07, Sum P(3) = 2.0e-07
Identities = 24/110 (21%), Positives = 43/110 (39%)
Query: 205 NGHASRCIKSPQGELVCE-CRHNTAGKDCEKCKPFFSDRPWGRATVYDANECKGGRCKCN 263
N + C+ + C C G+ CE+C P ++ P C+ C+C+
Sbjct: 1441 NNFSPSCVLEGLEDYRCTACPRGYEGQYCERCAPGYAGSPSS-----PGGSCQ--ECECD 1493
Query: 264 GHASRCIKSPQGALVCECRHNTAGKDCEKCKPFFSDRPWGRATVYDANEC 313
+ S + +C CR G+ C+ C+ + G V+ +EC
Sbjct: 1494 PYGSLPVPCDPVTGLCTCRPGATGRKCDGCEHGHARE--GAECVFCGDEC 1541
Score = 86 (35.3 bits), Expect = 8.5e-08, Sum P(2) = 8.5e-08
Identities = 35/129 (27%), Positives = 51/129 (39%)
Query: 197 KQGG--RCKCNGHASRCIKSPQ-GELVCECRHNTAGKDCEKCKPFFSDRPWGRATVYDAN 253
++GG C C+ + C +P+ G+ C C NT G+ C +C P WG + V
Sbjct: 970 QEGGCTACDCSHLGNNC--NPKTGQ--CICPPNTIGEKCSECLP----NTWGHSIVTGCK 1021
Query: 254 ECK----GG-RCKCNGHASRCIKSPQ-GALVC-ECRHNTAGKD-CEKCKPFFSDRPWGRA 305
C G +CN + +C P+ + C EC C C F P A
Sbjct: 1022 VCNCSTVGSLSSQCNINTGQCSCHPKFSGMKCSECNRGHWNYPLCSLCDCFL---PGTDA 1078
Query: 306 TVYDANECK 314
T D+ K
Sbjct: 1079 TTCDSETRK 1087
Score = 81 (33.6 bits), Expect = 2.5e-08, Sum P(3) = 2.5e-08
Identities = 23/72 (31%), Positives = 32/72 (44%)
Query: 202 CKCNGHASRCIKSPQGELVCECRHNTAGKDCEKCKPFFSDRPWGRATVYDANECKG-GRC 260
C C+G S G C C+ N G+DC CK +G + + N+ KG C
Sbjct: 432 CNCSGLGSTNQDPCIGP--CSCKENVEGEDCSHCK-------FGFFNLQEENQ-KGCEEC 481
Query: 261 KCNGHASRCIKS 272
C+G + RC S
Sbjct: 482 FCSGVSDRCQSS 493
Score = 80 (33.2 bits), Expect = 3.5e-07, Sum P(2) = 3.5e-07
Identities = 22/79 (27%), Positives = 33/79 (41%)
Query: 221 CECRHNTAGKDCEKCKPFFSDRPWGRATVYDANECKGGRCKCNGHASRCIKSPQGALVCE 280
C C+ G +C++C + P +C+ C C+G S G C
Sbjct: 405 CYCKPGFGGMNCDRCVRGYRGYP----------DCQP--CNCSGLGSTNQDPCIGP--CS 450
Query: 281 CRHNTAGKDCEKCK-PFFS 298
C+ N G+DC CK FF+
Sbjct: 451 CKENVEGEDCSHCKFGFFN 469
Score = 79 (32.9 bits), Expect = 4.5e-07, Sum P(2) = 4.5e-07
Identities = 23/96 (23%), Positives = 36/96 (37%)
Query: 202 CKCN--GHASRCIKSPQGELVCECRHNTAGKDCEKCKPFFSDRPWGRATVYDANECKGGR 259
C C+ G S G+ C C +G C +C + P ++ D
Sbjct: 1023 CNCSTVGSLSSQCNINTGQ--CSCHPKFSGMKCSECNRGHWNYPL--CSLCDCFLPGTDA 1078
Query: 260 CKCNGHASRCIKSPQGALVCECRHNTAGKDCEKCKP 295
C+ +C S Q C C+ N G C++C+P
Sbjct: 1079 TTCDSETRKCSCSDQTGQ-CTCKVNVEGVHCDRCRP 1113
Score = 66 (28.3 bits), Expect = 9.6e-06, Sum P(2) = 9.6e-06
Identities = 14/56 (25%), Positives = 25/56 (44%)
Query: 202 CKCNGHASRCIKSPQGELVCECRHNTAGKDCEKCKPFFSDRPWGRATVYDANECKG 257
C+C+ + S + +C CR G+ C+ C+ + G V+ +EC G
Sbjct: 1490 CECDPYGSLPVPCDPVTGLCTCRPGATGRKCDGCEHGHARE--GAECVFCGDECTG 1543
Score = 55 (24.4 bits), Expect = 2.5e-08, Sum P(3) = 2.5e-08
Identities = 14/38 (36%), Positives = 17/38 (44%)
Query: 272 SPQGALV--CECRHNTAGKDCEKCKPFF---SDRPWGR 304
SP L+ C+C +G CE C P F P GR
Sbjct: 1334 SPLANLIERCDCPPGYSGLSCETCAPGFYRVHSEPGGR 1371
Score = 48 (22.0 bits), Expect = 1.8e-05, Sum P(2) = 1.8e-05
Identities = 10/20 (50%), Positives = 14/20 (70%)
Query: 65 CDT-SGACHVCDAGSPRGRF 83
CD+ SG+C +C G+ GRF
Sbjct: 842 CDSLSGSCLICKPGTT-GRF 860
Score = 37 (18.1 bits), Expect = 1.5e-12, Sum P(3) = 1.5e-12
Identities = 7/22 (31%), Positives = 12/22 (54%)
Query: 193 DRHKKQGGRCKCNGHASRCIKS 214
+ ++K C C+G + RC S
Sbjct: 472 EENQKGCEECFCSGVSDRCQSS 493
>UNIPROTKB|E2RRE4 [details] [associations]
symbol:NTN5 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005576 "extracellular region" evidence=IEA]
InterPro:IPR001134 PROSITE:PS50189 GO:GO:0005576 InterPro:IPR002049
InterPro:IPR008993 Pfam:PF00053 SMART:SM00180 SUPFAM:SSF50242
PROSITE:PS01248 PROSITE:PS50027 InterPro:IPR018933 Pfam:PF01759
SMART:SM00643 GeneTree:ENSGT00700000104042 OMA:GGPFLLT
EMBL:AAEX03000816 Ensembl:ENSCAFT00000006331 Uniprot:E2RRE4
Length = 489
Score = 252 (93.8 bits), Expect = 6.4e-21, P = 6.4e-21
Identities = 84/257 (32%), Positives = 115/257 (44%)
Query: 67 TSGACHVCDAGSPRGRFPAEYLTDLNNPSNVTCWRSEAQTSVNSLSA--SPD---NVTLT 121
T+ C+ G PR P +T L + +C QT SL A SP N +LT
Sbjct: 15 TADPCYH-PGGRPRFCLPP--VTQLAGTA-ASC----PQTCALSLGADLSPRATCNGSLT 66
Query: 122 LSLGKKFELTYISLSFCPKSIKPDSLAIYKSQDFGKSWQPLQFYSSQCKKLYG-RTATGV 180
L+LG F LT +SL FC P +L + + G W+ L + L G T
Sbjct: 67 LALGGPFLLTSVSLRFCTPG-SP-ALVLSAAWANGGPWRSLWRRPAWPGALGGPEKVTFR 124
Query: 181 ISRGNEQEALCTDRHKKQGGR-----------CKCNGHASRCIKSPQGELVCECRHNTAG 229
G++ + + + GGR C+C+GHA+RC + C CRH+T G
Sbjct: 125 APPGSKSSVVVSHLRVEFGGRAGLAAAGVRGRCQCHGHAARCAARARPPR-CRCRHHTTG 183
Query: 230 KDCEKCKPFFSDRPWGRATVYDANECKGGRCKCNGHASRC--------IKSPQGALVCE- 280
CE C+P D PW AT + + C C CN HA RC + + VCE
Sbjct: 184 LGCESCRPSHRDWPWRPATPWHPHPCLP--CSCNQHARRCRFNSELFRLSGGRSGGVCER 241
Query: 281 CRHNTAGKDCEKCKPFF 297
CRH+TAG+ C C+P F
Sbjct: 242 CRHHTAGRHCHYCQPGF 258
Score = 148 (57.2 bits), Expect = 1.8e-10, Sum P(2) = 1.8e-10
Identities = 25/56 (44%), Positives = 33/56 (58%)
Query: 258 GRCKCNGHASRCIKSPQGALVCECRHNTAGKDCEKCKPFFSDRPWGRATVYDANEC 313
GRC+C+GHA+RC + C CRH+T G CE C+P D PW AT + + C
Sbjct: 155 GRCQCHGHAARCAARARPPR-CRCRHHTTGLGCESCRPSHRDWPWRPATPWHPHPC 209
Score = 138 (53.6 bits), Expect = 2.6e-09, Sum P(2) = 2.6e-09
Identities = 37/112 (33%), Positives = 47/112 (41%)
Query: 202 CKCNGHASRC-IKSPQGEL-------VCE-CRHNTAGKDCEKCKPFFSDRPWGRATVYDA 252
C CN HA RC S L VCE CRH+TAG+ C C+P F P G+ +
Sbjct: 212 CSCNQHARRCRFNSELFRLSGGRSGGVCERCRHHTAGRHCHYCQPGFWRDP-GQP-ITSR 269
Query: 253 NECKGGRCKCNGHASRCIKSPQGALVCECRHNTAGKDCEKCKPFF--SDRPW 302
C+ +C G G C C+ G C +C P + S PW
Sbjct: 270 KACRACQCHPIGATGGICNQTSGQ--CSCKLGVTGLTCNRCGPGYQQSRSPW 319
Score = 68 (29.0 bits), Expect = 1.8e-10, Sum P(2) = 1.8e-10
Identities = 18/50 (36%), Positives = 21/50 (42%)
Query: 25 SDPCYE-NGRPRRCIPDFVNAAFGQEVKVNSVCGLE-----SPERYCDTS 68
+DPCY GRPR C+P A G C L SP C+ S
Sbjct: 16 ADPCYHPGGRPRFCLPPVTQLA-GTAASCPQTCALSLGADLSPRATCNGS 64
>UNIPROTKB|F1LYH8 [details] [associations]
symbol:Ntng1 "Protein Ntng1" species:10116 "Rattus
norvegicus" [GO:0007409 "axonogenesis" evidence=IEA] [GO:0046658
"anchored to plasma membrane" evidence=IEA] InterPro:IPR000742
PROSITE:PS50026 SMART:SM00181 RGD:1563465 InterPro:IPR013032
PROSITE:PS00022 InterPro:IPR002049 Pfam:PF00053 SMART:SM00180
InterPro:IPR008211 Pfam:PF00055 SMART:SM00136 PROSITE:PS51117
IPI:IPI00560761 Ensembl:ENSRNOT00000042019 ArrayExpress:F1LYH8
Uniprot:F1LYH8
Length = 378
Score = 156 (60.0 bits), Expect = 6.8e-21, Sum P(2) = 6.8e-21
Identities = 39/125 (31%), Positives = 61/125 (48%)
Query: 74 CDAGSPRGRFPAEYLTDLNNPSNVTCWRSEAQTSVNSLSASPDNVTLTLSLGKKFELT-Y 132
CDA +P P E + D T W+S P V +TLS K ELT
Sbjct: 10 CDASTPELAHPPELMFDFEGRHPSTFWQSATWKEY----PKPLQVNITLSWSKTIELTDN 65
Query: 133 ISLSFCPKSIKPDSLAIYKSQDFGKSWQPLQFYSSQCKKLYGRTATGV--ISRGNEQEAL 190
I ++F +S +PD + + KS D+G++WQP Q+Y++ C + V +S+ E +
Sbjct: 66 IVITF--ESGRPDQMILEKSLDYGRTWQPYQYYATDCLHAFHMDPKSVKDLSQHTVLEII 123
Query: 191 CTDRH 195
CT+ +
Sbjct: 124 CTEEY 128
Score = 155 (59.6 bits), Expect = 6.8e-21, Sum P(2) = 6.8e-21
Identities = 26/48 (54%), Positives = 30/48 (62%)
Query: 197 KQGGRCKCNGHASRCIKSPQGELVCECRHNTAGKDCEKCKPFFSDRPW 244
K GRCKCN HA+ C+ +L CEC HNT G DC KCK + RPW
Sbjct: 210 KVRGRCKCNLHATMCVYD-NSKLTCECEHNTTGPDCGKCKKNYQGRPW 256
Score = 152 (58.6 bits), Expect = 1.4e-20, Sum P(2) = 1.4e-20
Identities = 25/45 (55%), Positives = 28/45 (62%)
Query: 258 GRCKCNGHASRCIKSPQGALVCECRHNTAGKDCEKCKPFFSDRPW 302
GRCKCN HA+ C+ L CEC HNT G DC KCK + RPW
Sbjct: 213 GRCKCNLHATMCVYD-NSKLTCECEHNTTGPDCGKCKKNYQGRPW 256
>RGD|1563465 [details] [associations]
symbol:Ntng1 "netrin G1" species:10116 "Rattus norvegicus"
[GO:0005886 "plasma membrane" evidence=ISO] [GO:0007409
"axonogenesis" evidence=IEA;ISO] [GO:0046658 "anchored to plasma
membrane" evidence=IEA;ISO] InterPro:IPR000742 PROSITE:PS50026
SMART:SM00181 RGD:1563465 InterPro:IPR013032 PROSITE:PS00022
InterPro:IPR002049 Pfam:PF00053 SMART:SM00180 InterPro:IPR008211
Pfam:PF00055 SMART:SM00136 PROSITE:PS51117 IPI:IPI00369129
Ensembl:ENSRNOT00000045113 UCSC:RGD:1563465 ArrayExpress:F1M3C7
Uniprot:F1M3C7
Length = 398
Score = 156 (60.0 bits), Expect = 8.4e-21, Sum P(2) = 8.4e-21
Identities = 39/125 (31%), Positives = 61/125 (48%)
Query: 74 CDAGSPRGRFPAEYLTDLNNPSNVTCWRSEAQTSVNSLSASPDNVTLTLSLGKKFELT-Y 132
CDA +P P E + D T W+S P V +TLS K ELT
Sbjct: 10 CDASTPELAHPPELMFDFEGRHPSTFWQSATWKEY----PKPLQVNITLSWSKTIELTDN 65
Query: 133 ISLSFCPKSIKPDSLAIYKSQDFGKSWQPLQFYSSQCKKLYGRTATGV--ISRGNEQEAL 190
I ++F +S +PD + + KS D+G++WQP Q+Y++ C + V +S+ E +
Sbjct: 66 IVITF--ESGRPDQMILEKSLDYGRTWQPYQYYATDCLHAFHMDPKSVKDLSQHTVLEII 123
Query: 191 CTDRH 195
CT+ +
Sbjct: 124 CTEEY 128
Score = 155 (59.6 bits), Expect = 8.4e-21, Sum P(2) = 8.4e-21
Identities = 26/48 (54%), Positives = 30/48 (62%)
Query: 197 KQGGRCKCNGHASRCIKSPQGELVCECRHNTAGKDCEKCKPFFSDRPW 244
K GRCKCN HA+ C+ +L CEC HNT G DC KCK + RPW
Sbjct: 210 KVRGRCKCNLHATMCVYD-NSKLTCECEHNTTGPDCGKCKKNYQGRPW 256
Score = 152 (58.6 bits), Expect = 1.7e-20, Sum P(2) = 1.7e-20
Identities = 25/45 (55%), Positives = 28/45 (62%)
Query: 258 GRCKCNGHASRCIKSPQGALVCECRHNTAGKDCEKCKPFFSDRPW 302
GRCKCN HA+ C+ L CEC HNT G DC KCK + RPW
Sbjct: 213 GRCKCNLHATMCVYD-NSKLTCECEHNTTGPDCGKCKKNYQGRPW 256
>FB|FBgn0261563 [details] [associations]
symbol:wb "wing blister" species:7227 "Drosophila
melanogaster" [GO:0005605 "basal lamina" evidence=ISS;NAS;IDA]
[GO:0005604 "basement membrane" evidence=ISS] [GO:0030155
"regulation of cell adhesion" evidence=IEA] [GO:0005102 "receptor
binding" evidence=IEA] [GO:0030334 "regulation of cell migration"
evidence=IEA] [GO:0045995 "regulation of embryonic development"
evidence=IEA] [GO:0005606 "laminin-1 complex" evidence=IEA]
[GO:0007502 "digestive tract mesoderm development" evidence=IMP]
[GO:0008406 "gonad development" evidence=IMP] [GO:0007476 "imaginal
disc-derived wing morphogenesis" evidence=IMP] InterPro:IPR009254
InterPro:IPR010307 Pfam:PF06008 Pfam:PF06009 GO:GO:0008406
EMBL:AE014134 GO:GO:0030155 GO:GO:0007155 InterPro:IPR013032
PROSITE:PS00022 Gene3D:2.60.120.200 InterPro:IPR008985
InterPro:IPR013320 SUPFAM:SSF49899 GO:GO:0030334 GO:GO:0005605
InterPro:IPR002049 InterPro:IPR001791 Pfam:PF00053 SMART:SM00180
SMART:SM00282 PROSITE:PS01248 PROSITE:PS50027 PROSITE:PS50025
GO:GO:0007476 Pfam:PF02210 HSSP:P00740 GO:GO:0045995
GeneTree:ENSGT00700000104140 InterPro:IPR000034 InterPro:IPR008211
Pfam:PF00052 Pfam:PF00055 SMART:SM00136 PROSITE:PS51115
PROSITE:PS51117 GO:GO:0007502 GO:GO:0005606 FlyBase:FBgn0261563
ChiTaRS:wb RefSeq:NP_723870.1 ProteinModelPortal:Q8IP51 SMR:Q8IP51
STRING:Q8IP51 PRIDE:Q8IP51 EnsemblMetazoa:FBtr0302731 GeneID:43946
KEGG:dme:Dmel_CG42677 UCSC:CG15288-RB CTD:43946 InParanoid:Q8IP51
OMA:CNCNAYG GenomeRNAi:43946 NextBio:836431 ArrayExpress:Q8IP51
Bgee:Q8IP51 Uniprot:Q8IP51
Length = 3375
Score = 208 (78.3 bits), Expect = 1.2e-20, Sum P(2) = 1.2e-20
Identities = 44/104 (42%), Positives = 57/104 (54%)
Query: 197 KQGGRCKCNGHASRCIKSPQGELV-CECRHNTAGKDCEKCKPFFSDRPWGRATVYDANEC 255
K R CNGHA+R +SP L+ C C+HNT G CE+C P F DRP+ EC
Sbjct: 395 KVSARLDCNGHANRSHESPDDPLMQCICQHNTCGAQCEQCCPLFQDRPYQMG-----GEC 449
Query: 256 KGGRCKCNGHASRCIKSP-QGALVCE-CRHNTAGKDCEKCKPFF 297
+ C+C GHA C P +C+ C +NTAG +CE C+ F
Sbjct: 450 E--ICQCYGHAESCTYDPFLDKGICQSCSNNTAGIECEFCEMGF 491
Score = 150 (57.9 bits), Expect = 1.6e-13, Sum P(2) = 1.6e-13
Identities = 32/81 (39%), Positives = 45/81 (55%)
Query: 225 HNTAGKDCEKCKPFFSDRP-WGRATVYDANECK-GGRCKCNGHASRCIKSPQGALV-CEC 281
H+TA +D + D P + + Y ++ K R CNGHA+R +SP L+ C C
Sbjct: 365 HSTANQD--NSLDWLLDSPSLEKHSFYSLSQLKVSARLDCNGHANRSHESPDDPLMQCIC 422
Query: 282 RHNTAGKDCEKCKPFFSDRPW 302
+HNT G CE+C P F DRP+
Sbjct: 423 QHNTCGAQCEQCCPLFQDRPY 443
Score = 141 (54.7 bits), Expect = 1.7e-12, Sum P(2) = 1.7e-12
Identities = 37/115 (32%), Positives = 55/115 (47%)
Query: 190 LCTDRHKKQGGRCK---CNGHASRCIKSP-QGELVCE-CRHNTAGKDCEKCKPFFS---D 241
L DR + GG C+ C GHA C P + +C+ C +NTAG +CE C+ F D
Sbjct: 437 LFQDRPYQMGGECEICQCYGHAESCTYDPFLDKGICQSCSNNTAGIECEFCEMGFYRELD 496
Query: 242 RPWGRATV-YDANECKG-GRCKCNGHASRCIKSPQGALVCECRHNTAGKDCEKCK 294
P + N + G C+ +G + C++ QG EC G DC++C+
Sbjct: 497 APLTDPCLPCSCNPARSTGGCQSDGGSCNCLEGFQGKNCEECAPGYYGDDCKRCE 551
Score = 115 (45.5 bits), Expect = 1.2e-20, Sum P(2) = 1.2e-20
Identities = 44/187 (23%), Positives = 79/187 (42%)
Query: 23 LNSDPCYENGRPRRCIPDFVNAAFGQEVKVNSVCGLESPERYCDTSGA--CHVCDA-GSP 79
L ++ Y + P N ++ VN+ CG E YC GA C +C+A S
Sbjct: 139 LKTEDVYSSSFSGGLYPPLFNVVPRAQISVNATCGQNGAEEYCKQVGAKPCGICNAHSSD 198
Query: 80 RGRFPA-EYLTDLNNPSNVTCWRSEAQTSVNSLSASP--DNVTLTLSLGKKFELTYISLS 136
R + + + L + S E +L + VT+ L L + F++ + L
Sbjct: 199 RAKQRSIQSLISSGSGSGSGSGFEEGWWQSPTLQGGRQFEYVTILLDLKQTFQIFSVWLK 258
Query: 137 FCPKSIKPDSLAIYKSQDFGKSWQPLQFYS---SQCKKLYGRTA-TGVISRGNEQEALCT 192
S +P S + KS D G +++P Q++ + C++ + + G N+ E +C+
Sbjct: 259 SA-NSPRPASWILEKSLD-GINFEPWQYFGLSDADCQRRWNLSGQNGKYVFQNDTEIICS 316
Query: 193 DRHKKQG 199
+ K G
Sbjct: 317 TQFSKPG 323
Score = 114 (45.2 bits), Expect = 1.7e-09, Sum P(2) = 1.7e-09
Identities = 31/101 (30%), Positives = 46/101 (45%)
Query: 202 CKCNGHASRCIKSPQGELVCE-CRHNTAGKDCEKCKPFFSDRPWGRATVYDANECKGGRC 260
C CNG +S C + G VC+ CR NT G C +C F P + C+ C
Sbjct: 1670 CHCNGRSSDCDRET-G--VCQNCRGNTGGDHCHQCAEGFYGDP------NSPHGCQACPC 1720
Query: 261 -KCNGHASRCIKSPQGALVCECRHNTAGKDCEKCKP-FFSD 299
+ N + +R G + C C+ G+ CE+C+ +F D
Sbjct: 1721 PETNRNFARGCNVWDGEVSCVCKPGYTGRLCERCQAGYFGD 1761
Score = 113 (44.8 bits), Expect = 2.2e-09, Sum P(2) = 2.2e-09
Identities = 32/100 (32%), Positives = 45/100 (45%)
Query: 202 CKCN-GHASRCIKSPQGELVCECRHNTAGKDCEKCKPFFSDRPWGRATVYDANECKGGRC 260
C CN ++ +S G C C GK+CE+C P G Y ++CK RC
Sbjct: 506 CSCNPARSTGGCQSDGGS--CNCLEGFQGKNCEECAP-------G----YYGDDCK--RC 550
Query: 261 KCNGHASR-CIKSPQGALVCECRHNTAGKDCEKCKPFFSD 299
+C+ S S G VC+C+ N G C +C P + D
Sbjct: 551 ECDERGSLGSTGSCSG--VCQCKLNVEGSTCSECAPGYFD 588
Score = 105 (42.0 bits), Expect = 1.5e-08, Sum P(2) = 1.5e-08
Identities = 28/94 (29%), Positives = 40/94 (42%)
Query: 221 CECRHNTAGKDCEKCKPFFSDRPWGRATVYDA-NECKGGRCKCNGHASRCIKSPQGALVC 279
C C G CE C F R + + + ++C C CNGH++ C Q
Sbjct: 815 CLCPAGYTGLSCEGCA-FGFKRIYENTSDHQILSKCIP--CPCNGHSNSC--DLQSGNCG 869
Query: 280 ECRHNTAGKDCEKCKPFFSDRPWGRATVYDANEC 313
+C HNT G CE+C+ + P + T D C
Sbjct: 870 DCMHNTFGDRCERCQLGYYGNPL-QGTPNDCKRC 902
Score = 104 (41.7 bits), Expect = 1.9e-08, Sum P(2) = 1.9e-08
Identities = 31/93 (33%), Positives = 40/93 (43%)
Query: 201 RCKCNGHASRCIKSPQGELVCECRHNTAGKDCEKCKPFFSDRPWGRATVYDANECKGGRC 260
RC C G C GE + CR NT G CE+CK + WG V C C
Sbjct: 973 RCDCAG--GPC-NVTTGECIT-CRGNTEGWHCERCKLGY----WGDPAV----GCDPCHC 1020
Query: 261 KCNGHASRCIKSPQGALVCECRHNTAGKDCEKC 293
G S S G +C+ R+ AG+ C++C
Sbjct: 1021 HTEGSESGLCDSTDGQCLCKPRY--AGQKCDEC 1051
Score = 102 (41.0 bits), Expect = 3.0e-08, Sum P(2) = 3.0e-08
Identities = 37/122 (30%), Positives = 51/122 (41%)
Query: 202 CKCNGHASRCIKSPQGELVC-ECRHNTAGKDCEKCKPFFSDRPWGRATVYDANECKGGRC 260
C CNGH++ C G C +C HNT G CE+C+ + P + T N+CK RC
Sbjct: 852 CPCNGHSNSC-DLQSGN--CGDCMHNTFGDRCERCQLGYYGNPL-QGT---PNDCK--RC 902
Query: 261 KC------NGHASRC-IKS-------PQGALV------C-ECRHNTAGKDCEKCKPFFSD 299
C N + C +KS PQ L+ C +C G C+ C +
Sbjct: 903 ACPLSEDSNNFSPSCQLKSYNYMDLNPQFELIEHAEYICTQCPEGYTGDHCQVCDDGYFG 962
Query: 300 RP 301
P
Sbjct: 963 NP 964
Score = 94 (38.1 bits), Expect = 2.0e-07, Sum P(2) = 2.0e-07
Identities = 28/86 (32%), Positives = 40/86 (46%)
Query: 221 CECRHNTAGKDCEKCKPFFSDRPWGRATVYDANECKG--GR---CKCNGHASRCIKSPQG 275
C+C G C+ P S W T+ ++ + GR C CNG +S C + G
Sbjct: 1628 CKCPKRFDGLSCQD--PGRSFYRWRNTTIVESVFIEDLIGRAAPCHCNGRSSDCDRET-G 1684
Query: 276 ALVCE-CRHNTAGKDCEKC-KPFFSD 299
VC+ CR NT G C +C + F+ D
Sbjct: 1685 --VCQNCRGNTGGDHCHQCAEGFYGD 1708
Score = 94 (38.1 bits), Expect = 2.0e-07, Sum P(2) = 2.0e-07
Identities = 27/97 (27%), Positives = 40/97 (41%)
Query: 202 CKC---NGHASRCIKSPQGELVCECRHNTAGKDCEKCKP-FFSDRPWGRATVYDANECKG 257
C C N + +R GE+ C C+ G+ CE+C+ +F D P Y C+
Sbjct: 1718 CPCPETNRNFARGCNVWDGEVSCVCKPGYTGRLCERCQAGYFGD-PMR----YPNTTCQP 1772
Query: 258 GRCKCNGHASRCIKSPQGALVCECRHNTAGKDCEKCK 294
C +G + G C CR G C+KC+
Sbjct: 1773 CNCHPDGIQTEGCDVETGR--CYCREGVTGLKCDKCQ 1807
Score = 93 (37.8 bits), Expect = 2.5e-07, Sum P(2) = 2.5e-07
Identities = 27/104 (25%), Positives = 42/104 (40%)
Query: 191 CTDRHKKQGGRCKCNGHASRCIKSPQGELVCECRHNTAGKDCEKCKPFFSDRPWGRATVY 250
C+ + G C+ +G + C++ QG+ EC G DC++C+ D R ++
Sbjct: 506 CSCNPARSTGGCQSDGGSCNCLEGFQGKNCEECAPGYYGDDCKRCE---CDE---RGSLG 559
Query: 251 DANECKGG-RCKCNGHASRCIKSPQGALVCECRHNTAGKDCEKC 293
C G +CK N S C + G N G C C
Sbjct: 560 STGSCSGVCQCKLNVEGSTCSECAPGYFDLSAE-NAEG--CTSC 600
Score = 90 (36.7 bits), Expect = 5.1e-07, Sum P(2) = 5.1e-07
Identities = 26/96 (27%), Positives = 41/96 (42%)
Query: 201 RCKCNGHASR-CIKSPQGELVCECRHNTAGKDCEKCKPFFSDRPWGRATVYDANECKGGR 259
RC+C+ S S G VC+C+ N G C +C P + D + +A C
Sbjct: 549 RCECDERGSLGSTGSCSG--VCQCKLNVEGSTCSECAPGYFD-----LSAENAEGCTS-- 599
Query: 260 CKCNGHASRCIKSPQGALVCECRHNTAGKDCEKCKP 295
C C+G + C + L E ++ D ++ KP
Sbjct: 600 CWCSGVSQTCHSAKLQTLAFETLNDWKITDIQRVKP 635
Score = 85 (35.0 bits), Expect = 1.7e-06, Sum P(2) = 1.7e-06
Identities = 23/78 (29%), Positives = 30/78 (38%)
Query: 218 ELVC-ECRHNTAGKDCEKCKPFFSDRPWGRATVYDANECKGGRCKCNGHASRCIKSPQGA 276
E +C +C G C+ C + P + +C GG CN CI
Sbjct: 938 EYICTQCPEGYTGDHCQVCDDGYFGNPRQPGSSCQRCDCAGG--PCNVTTGECIT----- 990
Query: 277 LVCECRHNTAGKDCEKCK 294
CR NT G CE+CK
Sbjct: 991 ----CRGNTEGWHCERCK 1004
Score = 80 (33.2 bits), Expect = 5.4e-06, Sum P(2) = 5.4e-06
Identities = 23/92 (25%), Positives = 39/92 (42%)
Query: 202 CKCNGHASRCIKSPQGELVCECRHNTAGKDCEKCKPFFSDRPWGRATVYDANECKGGRCK 261
C+C+ S + G+ C+CR +G+ C+ C + P R DA +G +
Sbjct: 1294 CECDHIGSIGQQCSTGDGQCQCREGYSGRKCDTCAIGYFGYPECRRCGCDA---EGSFTQ 1350
Query: 262 CNGHASRCIKSPQGALVCECRHNTAGKDCEKC 293
+G + C + Q C C+ G C+ C
Sbjct: 1351 ADGSIA-CDSNGQ----CPCKSLVVGLKCDTC 1377
Score = 69 (29.3 bits), Expect = 7.2e-05, Sum P(2) = 7.2e-05
Identities = 28/108 (25%), Positives = 43/108 (39%)
Query: 191 CTDRHKKQGGRC-KC-NGHASRCIKSPQGELVCECRHNTAGKDCE-KCKPFFSDRPWGRA 247
C + G +C +C +G+ + + + + R N+ D E + P D P +
Sbjct: 1085 CHCKEGVMGAKCHECQDGYFGMNAVAYRMDDLAALRQNSDSDDDEWELVPDTED-PNSES 1143
Query: 248 TVYDANECKGGRCKCNGHASRCIKSPQGALVCECRHNTAGKDCEKCKP 295
TV EC C G S G C C N G+ C+KC+P
Sbjct: 1144 TVA-CEEC---HCSSVGSLSSDCDKRTGQ--CACLANVTGRRCDKCRP 1185
>MGI|MGI:99892 [details] [associations]
symbol:Lama1 "laminin, alpha 1" species:10090 "Mus musculus"
[GO:0002011 "morphogenesis of an epithelial sheet" evidence=IMP]
[GO:0005102 "receptor binding" evidence=IEA] [GO:0005201
"extracellular matrix structural constituent" evidence=IDA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005576
"extracellular region" evidence=IEA] [GO:0005578 "proteinaceous
extracellular matrix" evidence=IDA] [GO:0005604 "basement membrane"
evidence=ISO;IDA] [GO:0005605 "basal lamina" evidence=TAS]
[GO:0005606 "laminin-1 complex" evidence=ISO;IDA] [GO:0005608
"laminin-3 complex" evidence=ISO] [GO:0005615 "extracellular space"
evidence=ISO] [GO:0005911 "cell-cell junction" evidence=IDA]
[GO:0007155 "cell adhesion" evidence=IEA] [GO:0007166 "cell surface
receptor signaling pathway" evidence=IDA] [GO:0009888 "tissue
development" evidence=IMP] [GO:0030155 "regulation of cell
adhesion" evidence=IEA] [GO:0030334 "regulation of cell migration"
evidence=IEA] [GO:0031012 "extracellular matrix" evidence=IDA]
[GO:0031175 "neuron projection development" evidence=IDA]
[GO:0043208 "glycosphingolipid binding" evidence=IDA] [GO:0043256
"laminin complex" evidence=IDA] [GO:0045198 "establishment of
epithelial cell apical/basal polarity" evidence=IMP] [GO:0045995
"regulation of embryonic development" evidence=IEA] [GO:0060041
"retina development in camera-type eye" evidence=IMP] [GO:0060441
"epithelial tube branching involved in lung morphogenesis"
evidence=IMP] [GO:0060445 "branching involved in salivary gland
morphogenesis" evidence=IMP] [GO:0061304 "retinal blood vessel
morphogenesis" evidence=IMP] InterPro:IPR009254 InterPro:IPR010307
Pfam:PF06008 Pfam:PF06009 MGI:MGI:99892 GO:GO:0030155 GO:GO:0007155
GO:GO:0005911 InterPro:IPR013032 PROSITE:PS00022
Gene3D:2.60.120.200 InterPro:IPR008985 InterPro:IPR013320
SUPFAM:SSF49899 GO:GO:0030334 Reactome:REACT_127416 GO:GO:0007166
PROSITE:PS01186 InterPro:IPR002049 InterPro:IPR001791 Pfam:PF00053
Pfam:PF00054 SMART:SM00180 SMART:SM00282 PROSITE:PS01248
PROSITE:PS50027 PROSITE:PS50025 GO:GO:0031175 GO:GO:0060441
GO:GO:0060445 Pfam:PF02210 GO:GO:0045198 GO:GO:0045995
GO:GO:0005201 GO:GO:0043208 GO:GO:0002011 InterPro:IPR018031
InterPro:IPR000034 InterPro:IPR008211 Pfam:PF00052 Pfam:PF00055
SMART:SM00281 SMART:SM00136 PROSITE:PS51115 PROSITE:PS51117
GO:GO:0061304 CTD:284217 eggNOG:NOG247347 HOGENOM:HOG000293201
HOVERGEN:HBG052298 KO:K05637 OrthoDB:EOG4K3KVB GO:GO:0005606
EMBL:J04064 EMBL:X07737 EMBL:X13459 EMBL:M36775 IPI:IPI00113726
PIR:A31771 RefSeq:NP_032506.2 UniGene:Mm.303386 PDB:2JD4
PDBsum:2JD4 ProteinModelPortal:P19137 SMR:P19137 MINT:MINT-2635122
STRING:P19137 PhosphoSite:P19137 PaxDb:P19137 PRIDE:P19137
GeneID:16772 KEGG:mmu:16772 UCSC:uc008dkh.1 InParanoid:P19137
EvolutionaryTrace:P19137 NextBio:290602 CleanEx:MM_LAMA1
Genevestigator:P19137 GermOnline:ENSMUSG00000032796 Uniprot:P19137
Length = 3084
Score = 194 (73.4 bits), Expect = 2.6e-20, Sum P(2) = 2.6e-20
Identities = 44/133 (33%), Positives = 61/133 (45%)
Query: 199 GGRCKCNGHASRCIKSPQG-ELVCECRHNTAGKDCEKCKPFFSDRPWGRATVYDANECKG 257
GG C C GHAS C + +L C+C HNT G+ C++C P + +PW T+ NEC+
Sbjct: 274 GGMCICYGHASSCPWDEEAKQLQCQCEHNTCGESCDRCCPGYHQQPWRPGTISSGNECE- 332
Query: 258 GRCKCNGHASRCIKSPQ---------------GALVC-ECRHNTAGKDCEKCKPFFSDRP 301
C C+ A C G VC C NT G +CE C + RP
Sbjct: 333 -ECNCHNKAKDCYYDSSVAKERRSLNTAGQYSGGGVCVNCSQNTTGINCETCIDQYY-RP 390
Query: 302 WGRATVYDANECK 314
+ + YD + C+
Sbjct: 391 H-KVSPYDDHPCR 402
Score = 137 (53.3 bits), Expect = 1.4e-13, Sum P(2) = 1.4e-13
Identities = 37/109 (33%), Positives = 49/109 (44%)
Query: 202 CKCNGHASRCIKSPQGELVCE-CRHNTAGKDCEKCKPFFSDRPWGRATVYDANECKGG-R 259
C+C+GHAS C G +C C HNT G CE+C P F P R T D C
Sbjct: 749 CECHGHASEC--DIHG--ICSVCTHNTTGDHCEQCLPGFYGTP-SRGTPGDCQPCACPLS 803
Query: 260 CKCNGHASRCIKSPQGALVCE-CRHNTAGKDCEKCKPFFSDRPWGRATV 307
N + C + +VC+ C +G CE+C +D +G TV
Sbjct: 804 IDSNNFSPTCHLTDGEEVVCDQCAPGYSGSWCERC----ADGYYGNPTV 848
Score = 136 (52.9 bits), Expect = 1.8e-13, Sum P(2) = 1.8e-13
Identities = 35/94 (37%), Positives = 42/94 (44%)
Query: 221 CECRHNTAGKDCEKCKPFFSDRPWGRATVYDANECKGGRCKCNGHASRCIKSPQGALVCE 280
CEC G CE C P + R G + C+ C+C+GHAS C G +C
Sbjct: 716 CECPQGYTGTSCEACLPGYY-RVDG---ILFGGICQP--CECHGHASEC--DIHG--ICS 765
Query: 281 -CRHNTAGKDCEKCKPFFSDRPWGRATVYDANEC 313
C HNT G CE+C P F P R T D C
Sbjct: 766 VCTHNTTGDHCEQCLPGFYGTP-SRGTPGDCQPC 798
Score = 129 (50.5 bits), Expect = 2.6e-20, Sum P(2) = 2.6e-20
Identities = 47/179 (26%), Positives = 76/179 (42%)
Query: 35 RRCIPDFVNAAFGQEVKVNSVCGLESPERYCDT----------SGACHVCDAGS--PRGR 82
R P +N A + N+ CG + PE +C C VCD S PR R
Sbjct: 27 RGLFPAILNLATNAHISANATCGEKGPEMFCKLVEHVPGRPVRHAQCRVCDGNSTNPRER 86
Query: 83 FPAEYLTDLNNPSNVTCWRSEAQTSVNSLSASPDNVTLTLSLGKKFELTYISLSFCPKSI 142
P + D N W+S S+ + VT+TL L + F++ YI + +
Sbjct: 87 HPISHAIDGTN----NWWQSP---SIQN-GREYHWVTVTLDLRQVFQVAYIIIK-AANAP 137
Query: 143 KPDSLAIYKSQDFGKSWQPLQFYS---SQCKKLYGRTAT-GVISRGNEQEALCTDRHKK 197
+P + + +S D G ++P Q+Y+ ++C Y T G + + E +CT + K
Sbjct: 138 RPGNWILERSVD-GVKFKPWQYYAVSDTECLTRYKITPRRGPPTYRADNEVICTSYYSK 195
Score = 108 (43.1 bits), Expect = 1.7e-10, Sum P(2) = 1.7e-10
Identities = 30/97 (30%), Positives = 44/97 (45%)
Query: 202 CKCNGH-----ASRCIKSPQGELVCECRHNTAGKDCEKCKPFFSDRPWGRATVYDANECK 256
C C+G+ A C S GE + +C NT G CE+C F +G A A C+
Sbjct: 856 CNCSGNVDPLEAGHC-DSVTGECL-KCLWNTDGAHCERCADGF----YGDAVT--AKNCR 907
Query: 257 GGRCKCNGHASRCIKSPQGALVCECRHNTAGKDCEKC 293
C NG S G +C+C+ + G+ C++C
Sbjct: 908 ACDCHENGSLSGVCHLETG--LCDCKPHVTGQQCDQC 942
Score = 103 (41.3 bits), Expect = 5.4e-10, Sum P(2) = 5.4e-10
Identities = 25/78 (32%), Positives = 35/78 (44%)
Query: 220 VCECRHNTAGKDCEKCKP-FFSDR-P--WGRATVYDANECKGGRCKCNGHASRCIKSPQG 275
+C C TAG C+ C P ++ ++ P GR C C CN H+ C P+
Sbjct: 1368 LCVCPPGTAGHSCQDCAPGYYREKLPESGGRGPRPLLAPCVP--CNCNNHSDVC--DPET 1423
Query: 276 ALVCECRHNTAGKDCEKC 293
CR +T+G CE C
Sbjct: 1424 GKCLSCRDHTSGDHCELC 1441
Score = 96 (38.9 bits), Expect = 2.9e-09, Sum P(2) = 2.9e-09
Identities = 27/106 (25%), Positives = 40/106 (37%)
Query: 202 CKCNGHASRCIKSPQGELVCECRHNTAGKDCEKCKPFFSDRPWGRATVYDANECKGGRCK 261
C CN H+ C P+ CR +T+G CE C + +G+ T +C C
Sbjct: 1410 CNCNNHSDVC--DPETGKCLSCRDHTSGDHCELCASGY----YGKVTGLPG-DCTP--CT 1460
Query: 262 CNGH-----ASRCIKSPQGALVCE-CRHNTAGKDCEKCKPFFSDRP 301
C H + C+ C C G+ CE+C + P
Sbjct: 1461 CPHHPPFSFSPTCVVEGDSDFRCNACLPGYEGQYCERCSAGYHGNP 1506
Score = 91 (37.1 bits), Expect = 9.4e-09, Sum P(2) = 9.4e-09
Identities = 31/102 (30%), Positives = 45/102 (44%)
Query: 205 NGHASRCIKSPQGELVCE-CRHNTAGKDCEKCKPFFSDRPWGRATVYDANECKGGRCKCN 263
N + C + E+VC+ C +G CE+C +D +G TV C C C+
Sbjct: 807 NNFSPTCHLTDGEEVVCDQCAPGYSGSWCERC----ADGYYGNPTV-PGGTCVP--CNCS 859
Query: 264 GH-----ASRCIKSPQGALVCECRHNTAGKDCEKCKP-FFSD 299
G+ A C S G + +C NT G CE+C F+ D
Sbjct: 860 GNVDPLEAGHC-DSVTGECL-KCLWNTDGAHCERCADGFYGD 899
Score = 90 (36.7 bits), Expect = 1.2e-08, Sum P(2) = 1.2e-08
Identities = 26/100 (26%), Positives = 36/100 (36%)
Query: 202 CKCNGH-----ASRCIKSPQGELVCE-CRHNTAGKDCEKCKPFFSDRPWGRATVYDANEC 255
C C H + C+ + C C G+ CE+C + P RA C
Sbjct: 1459 CTCPHHPPFSFSPTCVVEGDSDFRCNACLPGYEGQYCERCSAGYHGNP--RAA---GGSC 1513
Query: 256 KGGRCKCNGHASRCIKSPQGALVCECRHNTAGKDCEKCKP 295
+ C CN S + + C C+ G CEKC P
Sbjct: 1514 Q--TCDCNPQGSVHSDCDRASGQCVCKPGATGLHCEKCLP 1551
Score = 88 (36.0 bits), Expect = 1.9e-08, Sum P(2) = 1.9e-08
Identities = 25/79 (31%), Positives = 36/79 (45%)
Query: 221 CECRHNTAGKDCEKCKPFFSDRPWGRATVYDANECKGGRCKCNGHASR--CIKSPQGALV 278
C CR AG C++C+ F R + D C+ G + CI+ P
Sbjct: 434 CPCRKGYAGDKCDRCQ--FGYRGFPNCIPCD--------CRTVGSLNEDPCIE-P----- 477
Query: 279 CECRHNTAGKDCEKCKPFF 297
C C+ N GK+C++CKP F
Sbjct: 478 CLCKKNVEGKNCDRCKPGF 496
Score = 88 (36.0 bits), Expect = 1.9e-08, Sum P(2) = 1.9e-08
Identities = 26/99 (26%), Positives = 39/99 (39%)
Query: 202 CKC--NGHASRCIKSPQGELVCECRHNTAGKDCEKCKPFFSDRPWGRATVYDANECKGGR 259
C C NG S G +C+C+ + G+ C++C + +G T C
Sbjct: 909 CDCHENGSLSGVCHLETG--LCDCKPHVTGQQCDQCLSGY----YGLDTGLGCVPCN--- 959
Query: 260 CKCNGHAS-RCIKSPQGALVCECRHNTAGKDCEKCKPFF 297
C G S C + Q C C +GK C++C F
Sbjct: 960 CSVEGSVSDNCTEEGQ----CHCGPGVSGKQCDRCSHGF 994
Score = 86 (35.3 bits), Expect = 3.1e-08, Sum P(2) = 3.1e-08
Identities = 27/106 (25%), Positives = 41/106 (38%)
Query: 197 KQGGR-CKCNGHASRCIKSPQGELVCECRHNTAGKDCEKCK---PFFSDR-PWG---RAT 248
+QG + C C+ S + C C+ G+ C +C F D P G R T
Sbjct: 1045 EQGCQACNCSAVGSTSAQCDVLSGHCPCKKGFGGQSCHQCSLGYRSFPDCVPCGCDLRGT 1104
Query: 249 VYDANECKGGRCKCNGHASRCIKSPQGALVCECRHNTAGKDCEKCK 294
+ D + + G C C+ + C C+ N G C KC+
Sbjct: 1105 LPDTCDLEQGLCSCSEDSG----------TCSCKENVVGPQCSKCQ 1140
Score = 71 (30.1 bits), Expect = 1.1e-06, Sum P(2) = 1.1e-06
Identities = 25/102 (24%), Positives = 38/102 (37%)
Query: 202 CKCNGHASRCIKSPQGELVCECRHNTAGKDCEKCKPFFSDRPWGRATVYDANECKGGRCK 261
C C+ S + E C C +GK C++C F G T D C +
Sbjct: 958 CNCSVEGSVSDNCTE-EGQCHCGPGVSGKQCDRCSHGFYAFQDGGCTPCD---CAHTQNN 1013
Query: 262 CNGHASRCIKSPQGALVCECRHNTAGKDCEKCKPFFSDRPWG 303
C+ + C+ C +T G CE+C+ + WG
Sbjct: 1014 CDPASGECL----------CPPHTQGLKCEECEEAY----WG 1041
Score = 52 (23.4 bits), Expect = 9.3e-05, Sum P(2) = 9.3e-05
Identities = 8/18 (44%), Positives = 10/18 (55%)
Query: 278 VCECRHNTAGKDCEKCKP 295
+C C TAG C+ C P
Sbjct: 1368 LCVCPPGTAGHSCQDCAP 1385
Score = 38 (18.4 bits), Expect = 0.00032, Sum P(2) = 0.00032
Identities = 9/21 (42%), Positives = 9/21 (42%)
Query: 10 PLLIGAVCGEKIDLNSDPCYE 30
P I C LN DPC E
Sbjct: 456 PNCIPCDCRTVGSLNEDPCIE 476
>RGD|1307207 [details] [associations]
symbol:Lama1 "laminin, alpha 1" species:10116 "Rattus
norvegicus" [GO:0002011 "morphogenesis of an epithelial sheet"
evidence=IEA;ISO] [GO:0003674 "molecular_function" evidence=ND]
[GO:0005102 "receptor binding" evidence=IEA] [GO:0005201
"extracellular matrix structural constituent" evidence=IEA;ISO]
[GO:0005575 "cellular_component" evidence=ND] [GO:0005578
"proteinaceous extracellular matrix" evidence=ISO] [GO:0005604
"basement membrane" evidence=ISO] [GO:0005606 "laminin-1 complex"
evidence=IEA;ISO] [GO:0005608 "laminin-3 complex" evidence=IEA;ISO]
[GO:0005615 "extracellular space" evidence=IEA;ISO] [GO:0005911
"cell-cell junction" evidence=IEA;ISO] [GO:0007155 "cell adhesion"
evidence=IEA] [GO:0007166 "cell surface receptor signaling pathway"
evidence=IEA;ISO] [GO:0008150 "biological_process" evidence=ND]
[GO:0009888 "tissue development" evidence=ISO] [GO:0030155
"regulation of cell adhesion" evidence=IEA] [GO:0030334 "regulation
of cell migration" evidence=IEA] [GO:0031012 "extracellular matrix"
evidence=ISO] [GO:0031175 "neuron projection development"
evidence=IEA;ISO] [GO:0043208 "glycosphingolipid binding"
evidence=IEA;ISO] [GO:0043256 "laminin complex" evidence=ISO]
[GO:0045198 "establishment of epithelial cell apical/basal
polarity" evidence=IEA;ISO] [GO:0045995 "regulation of embryonic
development" evidence=IEA] [GO:0060041 "retina development in
camera-type eye" evidence=ISO] [GO:0060441 "epithelial tube
branching involved in lung morphogenesis" evidence=IEA;ISO]
[GO:0060445 "branching involved in salivary gland morphogenesis"
evidence=IEA;ISO] [GO:0061304 "retinal blood vessel morphogenesis"
evidence=IEA;ISO] InterPro:IPR009254 InterPro:IPR010307
Pfam:PF06008 Pfam:PF06009 RGD:1307207 GO:GO:0005615 GO:GO:0030155
GO:GO:0007155 GO:GO:0005911 InterPro:IPR013032 PROSITE:PS00022
Gene3D:2.60.120.200 InterPro:IPR008985 InterPro:IPR013320
SUPFAM:SSF49899 GO:GO:0030334 GO:GO:0007166 InterPro:IPR002049
InterPro:IPR001791 Pfam:PF00053 Pfam:PF00054 SMART:SM00180
SMART:SM00282 PROSITE:PS01248 PROSITE:PS50027 PROSITE:PS50025
GO:GO:0031175 GO:GO:0060441 GO:GO:0060445 Pfam:PF02210
GO:GO:0045198 GO:GO:0045995 GO:GO:0005201 GO:GO:0043208
GO:GO:0002011 GeneTree:ENSGT00700000104140 InterPro:IPR018031
InterPro:IPR000034 InterPro:IPR008211 Pfam:PF00052 Pfam:PF00055
SMART:SM00281 SMART:SM00136 PROSITE:PS51115 PROSITE:PS51117
GO:GO:0061304 CTD:284217 KO:K05637 OrthoDB:EOG4K3KVB GO:GO:0005606
GO:GO:0005608 EMBL:AB425340 IPI:IPI00363534 RefSeq:NP_001101707.2
UniGene:Rn.2807 Ensembl:ENSRNOT00000023226 GeneID:316758
KEGG:rno:316758 UCSC:RGD:1307207 NextBio:671215 Uniprot:D4A409
Length = 3083
Score = 194 (73.4 bits), Expect = 4.1e-20, Sum P(2) = 4.1e-20
Identities = 45/133 (33%), Positives = 64/133 (48%)
Query: 199 GGRCKCNGHASRCIKSPQG-ELVCECRHNTAGKDCEKCKPFFSDRPWGRATVYDANECKG 257
GG C C+GHAS C + +L C+C HNT G+ C++C P F +PW T+ +N+C+
Sbjct: 274 GGMCICSGHASSCPWDEEAKQLQCQCEHNTCGESCDRCCPGFHQQPWRPGTISSSNQCE- 332
Query: 258 GRCKCNGHASRCI---------KSPQ------GALVC-ECRHNTAGKDCEKCKPFFSDRP 301
C C+ A C KS G VC C NT G +CE C + RP
Sbjct: 333 -ECNCHNKAKDCYYDNNVAKERKSLNTAGQYSGGGVCINCLQNTTGINCETCIDQYY-RP 390
Query: 302 WGRATVYDANECK 314
+ + Y+ C+
Sbjct: 391 H-KVSPYEDQPCR 402
Score = 136 (52.9 bits), Expect = 2.9e-13, Sum P(2) = 2.9e-13
Identities = 36/109 (33%), Positives = 50/109 (45%)
Query: 202 CKCNGHASRCIKSPQGELVCE-CRHNTAGKDCEKCKPFFSDRPWGRATVYDANECKGG-R 259
C+C+GH+S C G +C C HNT G CE+C P F P R T D C
Sbjct: 749 CECHGHSSEC--DIHG--ICSGCTHNTTGDHCEQCLPGFYGTP-SRGTPGDCQPCACPLS 803
Query: 260 CKCNGHASRCIKSPQGALVCE-CRHNTAGKDCEKCKPFFSDRPWGRATV 307
N + C + + +VC+ C +G CE+C +D +G TV
Sbjct: 804 IDSNNFSPTCHLTDREEVVCDQCAPGYSGAWCERC----ADGYYGNPTV 848
Score = 133 (51.9 bits), Expect = 6.3e-13, Sum P(2) = 6.3e-13
Identities = 34/94 (36%), Positives = 42/94 (44%)
Query: 221 CECRHNTAGKDCEKCKPFFSDRPWGRATVYDANECKGGRCKCNGHASRCIKSPQGALVCE 280
CEC G CE C P + R G + C+ C+C+GH+S C G +C
Sbjct: 716 CECPQGYTGTSCEACLPGYY-RVDG---ILFGGICQP--CECHGHSSEC--DIHG--ICS 765
Query: 281 -CRHNTAGKDCEKCKPFFSDRPWGRATVYDANEC 313
C HNT G CE+C P F P R T D C
Sbjct: 766 GCTHNTTGDHCEQCLPGFYGTP-SRGTPGDCQPC 798
Score = 127 (49.8 bits), Expect = 4.1e-20, Sum P(2) = 4.1e-20
Identities = 46/179 (25%), Positives = 76/179 (42%)
Query: 35 RRCIPDFVNAAFGQEVKVNSVCGLESPERYCDT----------SGACHVCDAGS--PRGR 82
R P +N A + N+ CG + PE +C C VCD S PR R
Sbjct: 27 RGLFPAILNLATNAHISANATCGEKGPEMFCKLVEHVPGRPVRHAQCRVCDGNSTNPRER 86
Query: 83 FPAEYLTDLNNPSNVTCWRSEAQTSVNSLSASPDNVTLTLSLGKKFELTYISLSFCPKSI 142
P + D N W+S S+ + VT+TL L + F++ Y+ + +
Sbjct: 87 HPITHAIDGTN----NWWQSP---SIQN-GREYHWVTVTLDLRQVFQVAYVIIK-AANAP 137
Query: 143 KPDSLAIYKSQDFGKSWQPLQFYS---SQCKKLYGRTAT-GVISRGNEQEALCTDRHKK 197
+P + + +S D G ++P Q+Y+ ++C Y T G + + E +CT + K
Sbjct: 138 RPGNWILERSVD-GVKFRPWQYYAVSDTECLTRYKITPRRGPPTYRADNEVICTSYYSK 195
Score = 112 (44.5 bits), Expect = 1.1e-10, Sum P(2) = 1.1e-10
Identities = 31/99 (31%), Positives = 44/99 (44%)
Query: 202 CKCNGH-----ASRCIKSPQGELVCECRHNTAGKDCEKCKPFFSDRPWGRATVYDANECK 256
C C+G+ A C S GE + +C NT G CE+C F +G A A C+
Sbjct: 856 CNCSGNVDPLEAGHC-DSVTGECL-KCLWNTDGAHCERCADGF----YGDAVT--AKNCR 907
Query: 257 GGRCKCNGHASRCIKSPQGALVCECRHNTAGKDCEKCKP 295
C NG S G +C+C+ G+ C++C P
Sbjct: 908 ACNCHENGSLSGICHLETG--LCDCKPYVTGQQCDQCLP 944
Score = 101 (40.6 bits), Expect = 1.4e-09, Sum P(2) = 1.4e-09
Identities = 27/89 (30%), Positives = 37/89 (41%)
Query: 214 SPQGEL-----VCECRHNTAGKDCEKCKPFFS----DRPWGRATVYDANECKGGRCKCNG 264
+P+G++ +C C TAG C+ C P + GR C C CN
Sbjct: 1357 APEGKVALQLELCVCPPGTAGHSCQDCAPGYHRGKLPESSGRGPRPLLAPCVP--CNCNN 1414
Query: 265 HASRCIKSPQGALVCECRHNTAGKDCEKC 293
H+ C P+ CR +TAG CE C
Sbjct: 1415 HSDVC--DPETGKCLNCRDHTAGDHCELC 1441
Score = 100 (40.3 bits), Expect = 1.8e-09, Sum P(2) = 1.8e-09
Identities = 30/118 (25%), Positives = 45/118 (38%)
Query: 202 CKCNGHASRCIKSPQGELVCECRHNTAGKDCEKCKPFFSDRPWGRATVYDANECKGGRCK 261
C CN H+ C P+ CR +TAG CE C + +G+ + +C C
Sbjct: 1410 CNCNNHSDVC--DPETGKCLNCRDHTAGDHCELCTAGY----YGKV-IGLPGDCTP--CT 1460
Query: 262 CNGH-----ASRCIKSPQGALVCE-CRHNTAGKDCEKCKPFFSDRPWGRATVYDANEC 313
C H + C+ C+ C G+ CE+C + P RA +C
Sbjct: 1461 CPHHPPFSFSPTCVLEGDSGFWCDACLPGYEGQYCERCSAGYHGNP--RAAGGSCQKC 1516
Score = 93 (37.8 bits), Expect = 9.7e-09, Sum P(2) = 9.7e-09
Identities = 31/102 (30%), Positives = 46/102 (45%)
Query: 205 NGHASRCIKSPQGELVCE-CRHNTAGKDCEKCKPFFSDRPWGRATVYDANECKGGRCKCN 263
N + C + + E+VC+ C +G CE+C +D +G TV C C C+
Sbjct: 807 NNFSPTCHLTDREEVVCDQCAPGYSGAWCERC----ADGYYGNPTV-PGGTCVP--CNCS 859
Query: 264 GH-----ASRCIKSPQGALVCECRHNTAGKDCEKCKP-FFSD 299
G+ A C S G + +C NT G CE+C F+ D
Sbjct: 860 GNVDPLEAGHC-DSVTGECL-KCLWNTDGAHCERCADGFYGD 899
Score = 91 (37.1 bits), Expect = 1.6e-08, Sum P(2) = 1.6e-08
Identities = 27/101 (26%), Positives = 39/101 (38%)
Query: 202 CKC--NGHASRCIKSPQGELVCECRHNTAGKDCEKCKPFFSDRPWGRATVYDANECKGGR 259
C C NG S G +C+C+ G+ C++C P + G V
Sbjct: 909 CNCHENGSLSGICHLETG--LCDCKPYVTGQQCDQCLPGYYGLDTGLGCV---------P 957
Query: 260 CKCNGHAS---RCIKSPQGALVCECRHNTAGKDCEKCKPFF 297
C C+G S C + Q C C +GK C++C F
Sbjct: 958 CNCSGEGSISDNCTEEGQ----CHCVPGVSGKQCDQCSHGF 994
Score = 87 (35.7 bits), Expect = 4.0e-08, Sum P(2) = 4.0e-08
Identities = 25/100 (25%), Positives = 37/100 (37%)
Query: 202 CKCNGH-----ASRCIKSPQGELVCE-CRHNTAGKDCEKCKPFFSDRPWGRATVYDANEC 255
C C H + C+ C+ C G+ CE+C + P RA C
Sbjct: 1459 CTCPHHPPFSFSPTCVLEGDSGFWCDACLPGYEGQYCERCSAGYHGNP--RAA---GGSC 1513
Query: 256 KGGRCKCNGHASRCIKSPQGALVCECRHNTAGKDCEKCKP 295
+ +C CN S + + C C+ G CE+C P
Sbjct: 1514 Q--KCDCNPQGSVHSDCDRASGQCVCKPGATGLHCEECLP 1551
Score = 87 (35.7 bits), Expect = 4.0e-08, Sum P(2) = 4.0e-08
Identities = 29/109 (26%), Positives = 45/109 (41%)
Query: 197 KQGGR-CKCNGHASRCIKSPQGELV---CECRHNTAGKDCEKCK---PFFSDR-PWG--- 245
+QG + C C+ S SPQ +++ C C+ G+ C +C F D P
Sbjct: 1045 EQGCQACNCSVVGST---SPQCDVLSGQCSCKEGFGGQSCHQCSLGYRSFPDCVPCDCDL 1101
Query: 246 RATVYDANECKGGRCKCNGHASRCIKSPQGALVCECRHNTAGKDCEKCK 294
R T+ D + + G C C + C C+ N G C+KC+
Sbjct: 1102 RGTLADTCDLEQGLCSCTEDSG----------TCSCKENVLGPQCDKCR 1140
Score = 81 (33.6 bits), Expect = 1.7e-07, Sum P(2) = 1.7e-07
Identities = 27/102 (26%), Positives = 39/102 (38%)
Query: 202 CKCNGHASRCIKSPQGELVCECRHNTAGKDCEKCKPFFSDRPWGRATVYDANECKGGRCK 261
C C+G S + E C C +GK C++C F G T D C +
Sbjct: 958 CNCSGEGSISDNCTE-EGQCHCVPGVSGKQCDQCSHGFYAFQNGGCTPCD---CAHTQNN 1013
Query: 262 CNGHASRCIKSPQGALVCECRHNTAGKDCEKCKPFFSDRPWG 303
C+ + C+ C +T G CE+C+ F WG
Sbjct: 1014 CDPDSGECL----------CPPHTHGLKCEQCEEAF----WG 1041
Score = 80 (33.2 bits), Expect = 2.1e-07, Sum P(2) = 2.1e-07
Identities = 21/77 (27%), Positives = 32/77 (41%)
Query: 221 CECRHNTAGKDCEKCKPFFSDRPWGRATVYDANECKGGRCKCNGHASRCIKSPQGALVCE 280
C CR AG C++C+ + P C C C+ S + C
Sbjct: 434 CPCRKGYAGDKCDRCQFGYRGFP----------NCVP--CDCSTVGS--VNEDPCTEPCL 479
Query: 281 CRHNTAGKDCEKCKPFF 297
C+ N G++C++CKP F
Sbjct: 480 CKKNVEGENCDRCKPGF 496
Score = 59 (25.8 bits), Expect = 3.0e-05, Sum P(2) = 3.0e-05
Identities = 11/37 (29%), Positives = 15/37 (40%)
Query: 201 RCKCNGHASRCIKSPQGELVCECRHNTAGKDCEKCKP 237
+C CN S + C C+ G CE+C P
Sbjct: 1515 KCDCNPQGSVHSDCDRASGQCVCKPGATGLHCEECLP 1551
Score = 52 (23.4 bits), Expect = 0.00015, Sum P(2) = 0.00015
Identities = 8/18 (44%), Positives = 10/18 (55%)
Query: 278 VCECRHNTAGKDCEKCKP 295
+C C TAG C+ C P
Sbjct: 1368 LCVCPPGTAGHSCQDCAP 1385
>ZFIN|ZDB-GENE-060119-1 [details] [associations]
symbol:lama2 "laminin, alpha 2" species:7955 "Danio
rerio" [GO:0030155 "regulation of cell adhesion" evidence=IEA]
[GO:0005102 "receptor binding" evidence=IEA] [GO:0007155 "cell
adhesion" evidence=IEA] [GO:0030334 "regulation of cell migration"
evidence=IEA] [GO:0005604 "basement membrane" evidence=IEA]
[GO:0045995 "regulation of embryonic development" evidence=IEA]
[GO:0005606 "laminin-1 complex" evidence=IEA] [GO:0007517 "muscle
organ development" evidence=IMP] [GO:0060538 "skeletal muscle organ
development" evidence=IMP] [GO:0016203 "muscle attachment"
evidence=IGI;IMP] InterPro:IPR009254 InterPro:IPR010307
Pfam:PF06008 Pfam:PF06009 ZFIN:ZDB-GENE-060119-1 GO:GO:0030155
GO:GO:0007155 InterPro:IPR013032 PROSITE:PS00022
Gene3D:2.60.120.200 InterPro:IPR008985 InterPro:IPR013320
SUPFAM:SSF49899 GO:GO:0030334 GO:GO:0016203 InterPro:IPR002049
InterPro:IPR001791 Pfam:PF00053 Pfam:PF00054 SMART:SM00180
SMART:SM00282 PROSITE:PS01248 PROSITE:PS50027 PROSITE:PS50025
Pfam:PF02210 GO:GO:0045995 InterPro:IPR018031 InterPro:IPR000034
InterPro:IPR008211 Pfam:PF00052 Pfam:PF00055 SMART:SM00281
SMART:SM00136 PROSITE:PS51115 PROSITE:PS51117 GO:GO:0005606
EMBL:JN786913 Uniprot:G8IHT9
Length = 3124
Score = 172 (65.6 bits), Expect = 8.3e-20, Sum P(2) = 8.3e-20
Identities = 38/122 (31%), Positives = 56/122 (45%)
Query: 199 GGRCKCNGHASRC-IKSPQGELVCECRHNTAGKDCEKCKPFFSDRPWGRATVYDANECKG 257
GG C C GHA C + + + CEC HNT G+ C++C P ++ +PW T + C+
Sbjct: 269 GGMCICYGHAKACPLNTHTKKFSCECEHNTCGESCDRCCPAYNQKPWMAGTFLTRHVCE- 327
Query: 258 GRCKCNGHASRCIKSP---------------QGALVC-ECRHNTAGKDCEKCKPFFSDRP 301
+C C+ + C + +G VC C NT G +C+ C F RP
Sbjct: 328 -KCNCHNKSEECYYNQTVADAKLSLNIHGEYEGGGVCLGCSENTGGINCQSCIDGFY-RP 385
Query: 302 WG 303
G
Sbjct: 386 SG 387
Score = 150 (57.9 bits), Expect = 8.3e-20, Sum P(2) = 8.3e-20
Identities = 52/183 (28%), Positives = 84/183 (45%)
Query: 32 GRPRRCI-PDFVNAAFGQEVKVNSVCGLESPERYCDT----------SGACHVCDAGSPR 80
G P+R + P +N A E+K N+ CG PE YC + C CD S
Sbjct: 18 GAPQRGLFPAVLNLASMAEIKTNATCGETGPEMYCKLVEHVPGRPVKNPQCRTCDLNSDY 77
Query: 81 G--RFPAEYLTDLNNPSNVTCWRSEAQTSVNSLSASPDNVTLTLSLGKKFELTYISLSFC 138
R P E+ D N W+S + +N + +VT+TL L + F++ Y+ L
Sbjct: 78 DYERHPIEFAIDGTN----RWWQSPS--IMNGMDLH--HVTVTLDLQQVFQIAYVILK-A 128
Query: 139 PKSIKPDSLAIYKSQDFGKSWQPLQFYS---SQCKKLYGRTA-TGVISRGNEQEALCTDR 194
S +P + + +S D G+++ P Q+Y+ ++C Y TG S ++ E +CT
Sbjct: 129 ANSPRPGNWILERSLD-GETFMPWQYYAITDTECITRYDIIPRTGPPSYTHDDEVICTSF 187
Query: 195 HKK 197
+ K
Sbjct: 188 YSK 190
Score = 139 (54.0 bits), Expect = 4.3e-16, Sum P(2) = 4.3e-16
Identities = 22/59 (37%), Positives = 32/59 (54%)
Query: 257 GGRCKCNGHASRC-IKSPQGALVCECRHNTAGKDCEKCKPFFSDRPWGRATVYDANECK 314
GG C C GHA C + + CEC HNT G+ C++C P ++ +PW T + C+
Sbjct: 269 GGMCICYGHAKACPLNTHTKKFSCECEHNTCGESCDRCCPAYNQKPWMAGTFLTRHVCE 327
Score = 138 (53.6 bits), Expect = 5.5e-16, Sum P(2) = 5.5e-16
Identities = 33/106 (31%), Positives = 45/106 (42%)
Query: 201 RCKCNGHASRCIKSPQGELVCECRHNTAGKDCEKCKPFFSDRPWGRATVYDANECKGGRC 260
RC+CNGH+ C P+ + C+HNT G CE+C F +G + ++CK C
Sbjct: 1396 RCQCNGHSDSC--DPETSICQNCQHNTVGDKCERCAAGF----YGVVRGF-TDDCKPCAC 1448
Query: 261 KC----NGHASRCIKSPQGALVCE-CRHNTAGKDCEKCKPFFSDRP 301
N + C C C GK CE+C P F P
Sbjct: 1449 PLLNPENNFSPTCQTEGFNEYRCTACPEGYEGKHCERCAPGFHGDP 1494
Score = 133 (51.9 bits), Expect = 1.8e-15, Sum P(2) = 1.8e-15
Identities = 29/80 (36%), Positives = 38/80 (47%)
Query: 221 CECRHNTAGKDCEKCKPFF---SDRPWGRATVYDANECKGGRCKCNGHASRCIKSPQGAL 277
C C AG CE+C F S G A+ C RC+CNGH+ C P+ ++
Sbjct: 1357 CVCPQGYAGLSCEECAAGFYRLSVLAGGSASRAGFGSCV--RCQCNGHSDSC--DPETSI 1412
Query: 278 VCECRHNTAGKDCEKCKPFF 297
C+HNT G CE+C F
Sbjct: 1413 CQNCQHNTVGDKCERCAAGF 1432
Score = 128 (50.1 bits), Expect = 6.0e-15, Sum P(2) = 6.0e-15
Identities = 30/105 (28%), Positives = 49/105 (46%)
Query: 202 CKCNGHASRCIKSPQGELVCECRHNTAGKDCEKCKPFFSDRPWGRATVYDANECKGGRCK 261
C+C+GH RC G + CR +T G +C +C P + +G AT A++C+ C
Sbjct: 742 CQCHGHTERC-DDLTGHCL-GCRDHTVGPNCGQCAPGY----YGDATRGTADDCQPCACP 795
Query: 262 ----CNGHASRCIKSPQGALVCE-CRHNTAGKDCEKCKPFFSDRP 301
N + C +G ++C+ C G C++C + RP
Sbjct: 796 LLSPANNFSPTCRVDGRGEVICDRCPPGYTGSRCDRCSNGYFGRP 840
Score = 118 (46.6 bits), Expect = 6.5e-14, Sum P(2) = 6.5e-14
Identities = 30/101 (29%), Positives = 45/101 (44%)
Query: 199 GGRCK---CNGHASRCIKSPQGELV--C-ECRHNTAGKDCEKCKPFFSDRPWGRATVYDA 252
GG C+ C+G+ + L C CR G DCE+C +D +G A + A
Sbjct: 844 GGSCQPCVCSGNLDQTAPLSCDPLTGACLRCRKGYGGADCERC----ADGYFGDALI--A 897
Query: 253 NECKGGRCKCNGHASRCIKSPQGALVCECRHNTAGKDCEKC 293
C+ +C NG S G C+CR + G+ C++C
Sbjct: 898 KNCQACQCHSNGSVSELCHQETGQ--CQCRQHVIGRQCDEC 936
Score = 117 (46.2 bits), Expect = 8.3e-14, Sum P(2) = 8.3e-14
Identities = 33/107 (30%), Positives = 46/107 (42%)
Query: 197 KQGG--RCKCNGHASRCIKSPQGELVCECRHNTAGKDCEKCKPFFSDRPWGRATVYDANE 254
++GG C+C + C S G+ C C NT G+ C+KC P WG +
Sbjct: 991 QEGGCTPCQCAHVGNNCDAST-GQ--CICPPNTVGERCDKCAP----NHWGHDI---STG 1040
Query: 255 CKGGRCKCNGHASRCIKSPQGALVCECRHNTAGKDCEKCKPFFSDRP 301
CK C CN S + C CR G+ C++CK + D P
Sbjct: 1041 CKP--CGCNALGSVAQQCNLNTGCCMCREQFRGEKCDECKLGYRDFP 1085
Score = 111 (44.1 bits), Expect = 3.5e-13, Sum P(2) = 3.5e-13
Identities = 31/95 (32%), Positives = 42/95 (44%)
Query: 220 VCECRHNTAGKDCEKCKPFFSDRPWGRATVYDANECKGGRCKCNGHASRCIKSPQGALVC 279
VC+C G CE C + R G T+Y C+ C+C+GH RC L
Sbjct: 708 VCQCPPGYDGTSCEMCALGYR-RVNG--TIYQG-VCE--LCQCHGHTERCDDLTGHCL-- 759
Query: 280 ECRHNTAGKDCEKCKP-FFSDRPWGRATVYDANEC 313
CR +T G +C +C P ++ D R T D C
Sbjct: 760 GCRDHTVGPNCGQCAPGYYGDAT--RGTADDCQPC 792
Score = 103 (41.3 bits), Expect = 2.3e-12, Sum P(2) = 2.3e-12
Identities = 23/93 (24%), Positives = 37/93 (39%)
Query: 202 CKCNGHASRCIKSPQGELVCECRHNTAGKDCEKCKPFFSDRPWGRATVYDANECKGGRCK 261
C CN S + C CR G+ C++CK + D P + +
Sbjct: 1044 CGCNALGSVAQQCNLNTGCCMCREQFRGEKCDECKLGYRDFP--QCISCQCSAAGSSLDT 1101
Query: 262 CNGHASRCIKSPQGALVCECRHNTAGKDCEKCK 294
C+ + C + + C C+ N G+ CE+CK
Sbjct: 1102 CDSESGLCACADRSGQ-CSCKANVEGQKCERCK 1133
Score = 97 (39.2 bits), Expect = 9.8e-12, Sum P(2) = 9.8e-12
Identities = 22/72 (30%), Positives = 34/72 (47%)
Query: 201 RCKCNGHASRCIKSPQGELVCECRHNTAGKDCEKCKPFFSDRPWGRATVYDANECKGGRC 260
RC+C+ S + + C C+ + G+DC++CK F GR D +C
Sbjct: 453 RCRCSSDGS--VNQDPCQPPCVCKEHVEGRDCDRCKQGFYHLSGGRVRGCD-------KC 503
Query: 261 KCNGHASRCIKS 272
C+G AS C +S
Sbjct: 504 YCSGVASLCAES 515
Score = 93 (37.8 bits), Expect = 2.5e-11, Sum P(2) = 2.5e-11
Identities = 24/93 (25%), Positives = 40/93 (43%)
Query: 221 CECRHNTAGKDCEKCKPFFSDRPWGRATVYDANECKGGRCKCNGHASRCIKSPQGALVCE 280
C C+ AG+ C++C ++ P +C+ RC+C+ S + C
Sbjct: 427 CICKPGYAGERCDRCVFGYAGFP----------QCE--RCRCSSDGS--VNQDPCQPPCV 472
Query: 281 CRHNTAGKDCEKCKPFFSDRPWGRATVYDANEC 313
C+ + G+DC++CK F GR D C
Sbjct: 473 CKEHVEGRDCDRCKQGFYHLSGGRVRGCDKCYC 505
Score = 89 (36.4 bits), Expect = 6.6e-11, Sum P(2) = 6.6e-11
Identities = 28/93 (30%), Positives = 37/93 (39%)
Query: 205 NGHASRCIKSPQGELVCE-CRHNTAGKDCEKCKPFFSDRPWGRATVYDANECKGGRCKCN 263
N + C E C C GK CE+C P F P G C+ CKC+
Sbjct: 1455 NNFSPTCQTEGFNEYRCTACPEGYEGKHCERCAPGFHGDP-GVL----GGRCE--ECKCD 1507
Query: 264 GHA---SRCIKSPQGALVCECRHNTAGKDCEKC 293
+ S C S G C+CR +G C++C
Sbjct: 1508 PYGAFPSAC-DSHSGQ--CQCRPGASGLKCDQC 1537
Score = 72 (30.4 bits), Expect = 3.7e-09, Sum P(2) = 3.7e-09
Identities = 19/70 (27%), Positives = 31/70 (44%)
Query: 204 CNGHASRCIKSPQ-GELVCECRHNTAGKDCEKCKPFFSDRPWGRATVYDANECKGGRCKC 262
C+ + C + + G+ C C+ N G+ CE+CK G + N RC C
Sbjct: 1102 CDSESGLCACADRSGQ--CSCKANVEGQKCERCKS-------GSFGLSHRNPLGCSRCYC 1152
Query: 263 NGHASRCIKS 272
G +S C ++
Sbjct: 1153 FGLSSSCTEA 1162
Score = 66 (28.3 bits), Expect = 1.5e-08, Sum P(2) = 1.5e-08
Identities = 21/65 (32%), Positives = 30/65 (46%)
Query: 199 GGRC---KCNGHA---SRCIKSPQGELVCECRHNTAGKDCEKCKPFFSDRPWGRATVYDA 252
GGRC KC+ + S C S G+ C+CR +G C++C P G + D
Sbjct: 1498 GGRCEECKCDPYGAFPSAC-DSHSGQ--CQCRPGASGLKCDQCMERHVCGPEGIVSCDD- 1553
Query: 253 NECKG 257
+C G
Sbjct: 1554 -DCAG 1557
Score = 55 (24.4 bits), Expect = 2.1e-07, Sum P(2) = 2.1e-07
Identities = 28/98 (28%), Positives = 42/98 (42%)
Query: 202 CKCNG-HASRCIKSPQGE--LVCE-CR---HN---TAGKDCEKCKPFFSDRPWGRATVYD 251
C+ G + RC P+G CE C H G CE+CK D P+G
Sbjct: 1461 CQTEGFNEYRCTACPEGYEGKHCERCAPGFHGDPGVLGGRCEECK---CD-PYGAFP--S 1514
Query: 252 ANECKGGRCKCNGHAS-----RCIK----SPQGALVCE 280
A + G+C+C AS +C++ P+G + C+
Sbjct: 1515 ACDSHSGQCQCRPGASGLKCDQCMERHVCGPEGIVSCD 1552
>UNIPROTKB|F1PEZ5 [details] [associations]
symbol:LAMA2 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0045995 "regulation of embryonic development"
evidence=IEA] [GO:0030334 "regulation of cell migration"
evidence=IEA] [GO:0030155 "regulation of cell adhesion"
evidence=IEA] [GO:0007155 "cell adhesion" evidence=IEA] [GO:0005606
"laminin-1 complex" evidence=IEA] [GO:0005102 "receptor binding"
evidence=IEA] InterPro:IPR009254 InterPro:IPR010307 Pfam:PF06008
Pfam:PF06009 GO:GO:0030155 GO:GO:0007155 Gene3D:2.60.120.200
InterPro:IPR008985 InterPro:IPR013320 SUPFAM:SSF49899 GO:GO:0030334
InterPro:IPR008979 SUPFAM:SSF49785 InterPro:IPR002049
InterPro:IPR001791 Pfam:PF00053 Pfam:PF00054 SMART:SM00180
SMART:SM00282 PROSITE:PS01248 PROSITE:PS50027 PROSITE:PS50025
Pfam:PF02210 GO:GO:0045995 GeneTree:ENSGT00700000104140
InterPro:IPR018031 InterPro:IPR000034 InterPro:IPR008211
Pfam:PF00052 Pfam:PF00055 SMART:SM00281 SMART:SM00136
PROSITE:PS51115 PROSITE:PS51117 GO:GO:0005606 EMBL:AAEX03000448
EMBL:AAEX03000449 EMBL:AAEX03000450 EMBL:AAEX03000451
EMBL:AAEX03000452 EMBL:AAEX03000453 Ensembl:ENSCAFT00000036090
Uniprot:F1PEZ5
Length = 3085
Score = 190 (71.9 bits), Expect = 1.0e-19, Sum P(2) = 1.0e-19
Identities = 47/128 (36%), Positives = 55/128 (42%)
Query: 199 GGRCKCNGHASRCIKSP-QGELVCECRHNTAGKDCEKCKPFFSDRPWGRATVYDANECKG 257
GG C C GHA C P + CEC HNT G C++C P F +PW T EC+
Sbjct: 247 GGMCICYGHARACPLDPVTNKSRCECEHNTCGDSCDQCCPGFHQKPWRAGTFLTKTECEA 306
Query: 258 GRCKCNGHASRCIKSPQ---------------GALVC-ECRHNTAGKDCEKC-KPFFSDR 300
C C+G A C G VC C NTAG +CE C FF R
Sbjct: 307 --CNCHGKAEECYYDENVARRNLSLNIHGKYIGGGVCINCTQNTAGINCETCIDGFF--R 362
Query: 301 PWGRATVY 308
P G + Y
Sbjct: 363 PKGVSPSY 370
Score = 143 (55.4 bits), Expect = 3.7e-14, Sum P(2) = 3.7e-14
Identities = 32/88 (36%), Positives = 41/88 (46%)
Query: 228 AGKDCEKCKPFFSDRPWGRATVYDANECKGGRCKCNGHASRCIKSP-QGALVCECRHNTA 286
A KD + P + R + +V D + GG C C GHA C P CEC HNT
Sbjct: 222 AHKDPREIDPIVTRRYY--YSVKDISV--GGMCICYGHARACPLDPVTNKSRCECEHNTC 277
Query: 287 GKDCEKCKPFFSDRPWGRATVYDANECK 314
G C++C P F +PW T EC+
Sbjct: 278 GDSCDQCCPGFHQKPWRAGTFLTKTECE 305
Score = 128 (50.1 bits), Expect = 1.0e-19, Sum P(2) = 1.0e-19
Identities = 46/175 (26%), Positives = 76/175 (43%)
Query: 39 PDFVNAAFGQEVKVNSVCGLESPERYCDT----------SGACHVCDAGS--PRGRFPAE 86
P +N A + N+ CG + PE YC + C +C+ S P R P
Sbjct: 4 PAVLNLASNALITTNATCGEKGPEMYCKLVEHVPGQPVRNPQCRICNQNSSNPYQRHPIT 63
Query: 87 YLTDLNNPSNVTCWRSEAQTSVNSLSASPDNVTLTLSLGKKFELTYISLSFCPKSIKPDS 146
D N T W+S S+ + VT+TL L + F++ Y+ + S +P +
Sbjct: 64 NAIDGKN----TWWQSP---SIKN-GIEYHYVTITLDLQQVFQIAYVIVK-AANSPRPGN 114
Query: 147 LAIYKSQDFGKSWQPLQFYS---SQCKKLYG-RTATGVISRGNEQEALCTDRHKK 197
+ +S D G ++P Q+++ ++C LY TG S + E +CT + K
Sbjct: 115 WILERSLD-GVDYRPWQYHAVTDTECLALYNIYPRTGPPSYAKDDEVICTSFYSK 168
Score = 128 (50.1 bits), Expect = 1.8e-12, Sum P(2) = 1.8e-12
Identities = 31/85 (36%), Positives = 42/85 (49%)
Query: 214 SPQGELV--CECRHNTAGKDCEKCKPFFSDRPW--GRATVYDA-NECKGGRCKCNGHASR 268
+P L+ CEC +G CE C P F P G A A C C+C+GH+S
Sbjct: 1334 APPARLIERCECPAGHSGLSCEACGPGFYRLPSEPGSAAARPALGPCVP--CQCHGHSSL 1391
Query: 269 CIKSPQGALVCECRHNTAGKDCEKC 293
C P+ + C+H+TAG CE+C
Sbjct: 1392 C--DPETSKCQNCQHHTAGDFCERC 1414
Score = 119 (46.9 bits), Expect = 1.6e-11, Sum P(2) = 1.6e-11
Identities = 31/97 (31%), Positives = 44/97 (45%)
Query: 202 CKCNGHASRCIKSPQGELV--CE-CRHNTAGKDCEKCKPFFSDRPWGRATVYDANECKGG 258
C+CN + I L C C+ TAG+ CE C +D +G A +A C+
Sbjct: 828 CQCNDNLDFSIPGSCDSLSGSCRICKPGTAGRRCELC----ADGYFGDAV--EAKNCQPC 881
Query: 259 RCKCNGHASRCIKSPQGALVCECRHNTAGKDCEKCKP 295
C N S + G CEC+ N G+ C++CKP
Sbjct: 882 GCHVNSSLSESCHARTGQ--CECKPNVQGRRCDECKP 916
Score = 112 (44.5 bits), Expect = 8.2e-11, Sum P(2) = 8.2e-11
Identities = 33/121 (27%), Positives = 47/121 (38%)
Query: 198 QGGR----CKCNGHASRCIKSPQ-GELVCECRHNTAGKDCEKCKPFFSDRPWGRATVYDA 252
Q GR CKCN S+ + G+ C C+ GK C++C + + G T
Sbjct: 922 QSGRGCVPCKCNSFGSKSFDCEESGQ--CWCQPGVTGKKCDRCAHGYFNFQEGGCTA--- 976
Query: 253 NECKGGRCKCNGHASRCIKSPQGALVCECRHNTAGKDCEKCKPFFSDRPWGRATVYDANE 312
C C+ + C P+ C C NT G+ C KC P WG + +
Sbjct: 977 -------CDCSHLGNNC--DPKTGQ-CICPPNTVGEKCSKCSP----NTWGHSIITGCKA 1022
Query: 313 C 313
C
Sbjct: 1023 C 1023
Score = 110 (43.8 bits), Expect = 1.3e-10, Sum P(2) = 1.3e-10
Identities = 32/120 (26%), Positives = 51/120 (42%)
Query: 202 CKCNGHASRCIKSPQGELVCECRHNTAGKDCEKCKPFFSDRPWGRATVYDANECKGGRCK 261
C+C+GH+S C P+ C+H+TAG CE+C + G N+C+ +C
Sbjct: 1383 CQCHGHSSLC--DPETSKCQNCQHHTAGDFCERCALGYYGIVRGLP-----NDCQ--QCA 1433
Query: 262 C------NGHASRCIKSPQGALVCE-CRHNTAGKDCEKCKPFFSDRPWGRATVYDANECK 314
C N + C+ C C G+ CE+C ++ P R+ EC+
Sbjct: 1434 CPLISSSNNFSPSCVLEGLDDYRCTACPRGYEGQYCERCSAGYTGSP--RSPGGTCQECE 1491
Score = 107 (42.7 bits), Expect = 2.7e-10, Sum P(2) = 2.7e-10
Identities = 31/94 (32%), Positives = 40/94 (42%)
Query: 220 VCECRHNTAGKDCEKCKPFFSDRPWGRATVYDANECKGGRCKCNGHASRCIKSPQGALVC 279
VC+C +G CE C P R G TV+ C+ C+C GHA C L
Sbjct: 686 VCQCPPGYSGSSCESCWPRHR-RVNG--TVF-GGICEP--CQCFGHAESCDDLTGECL-- 737
Query: 280 ECRHNTAGKDCEKCKPFFSDRPWGRATVYDANEC 313
C+ +T G C +C P F P + T D C
Sbjct: 738 NCKDHTGGPHCNQCLPGFYGDP-SKGTSEDCLPC 770
Score = 107 (42.7 bits), Expect = 2.7e-10, Sum P(2) = 2.7e-10
Identities = 34/128 (26%), Positives = 51/128 (39%)
Query: 184 GNEQEALCTDRHKKQGGR--------CKCNGHASRCIKSPQGELVCECRHNTAGKDCEKC 235
G+ E+ C RH++ G C+C GHA C GE + C+ +T G C +C
Sbjct: 695 GSSCES-CWPRHRRVNGTVFGGICEPCQCFGHAESC-DDLTGECL-NCKDHTGGPHCNQC 751
Query: 236 KPFFSDRPWGRATVYDANECKGG-RCKCNGHASRCIKSPQGALVCE-CRHNTAGKDCEKC 293
P F P + T D C N + C L+C+ C G C++C
Sbjct: 752 LPGFYGDP-SKGTSEDCLPCACPLSIPSNNFSPTCHLERGLGLMCDACPAGYTGPRCDRC 810
Query: 294 KPFFSDRP 301
+ +P
Sbjct: 811 AEGYFGQP 818
Score = 92 (37.4 bits), Expect = 9.5e-09, Sum P(2) = 9.5e-09
Identities = 25/110 (22%), Positives = 44/110 (40%)
Query: 205 NGHASRCIKSPQGELVCE-CRHNTAGKDCEKCKPFFSDRPWGRATVYDANECKGGRCKCN 263
N + C+ + C C G+ CE+C ++ P R+ C+ C+C+
Sbjct: 1441 NNFSPSCVLEGLDDYRCTACPRGYEGQYCERCSAGYTGSP--RSP---GGTCQ--ECECD 1493
Query: 264 GHASRCIKSPQGALVCECRHNTAGKDCEKCKPFFSDRPWGRATVYDANEC 313
S + +C CR G C+ C+P + + G V+ +EC
Sbjct: 1494 PQGSLPLPCDPATGLCTCRPGATGPKCDGCQPGHARQ--GSECVFCGDEC 1541
Score = 91 (37.1 bits), Expect = 1.2e-08, Sum P(2) = 1.2e-08
Identities = 29/91 (31%), Positives = 40/91 (43%)
Query: 220 VC-ECRHNTAGKDCEKC-KPFFSDRPWGRATVYDANECKGGRCKCNGHASR-CIKSPQGA 276
VC C NTAG +CE C FF RP G + Y C+ C G + C+K + A
Sbjct: 340 VCINCTQNTAGINCETCIDGFF--RPKGVSPSYP-RPCQPCHCDPVGSLNEVCVKDEKRA 396
Query: 277 ---LV---CECRHNTAGKDCEKCKPFFSDRP 301
L C C+ G C++C ++ P
Sbjct: 397 RRGLAPGSCHCKPGFRGVSCDRCARGYTGYP 427
Score = 86 (35.3 bits), Expect = 4.0e-08, Sum P(2) = 4.0e-08
Identities = 23/79 (29%), Positives = 33/79 (41%)
Query: 221 CECRHNTAGKDCEKCKPFFSDRPWGRATVYDANECKGGRCKCNGHASRCIKSPQGALVCE 280
C C+ G C++C ++ P +CK C C+G S G C
Sbjct: 405 CHCKPGFRGVSCDRCARGYTGYP----------DCKP--CNCSGAGSTNEDPCFGP--CN 450
Query: 281 CRHNTAGKDCEKCKP-FFS 298
C+ N G DC +CK FF+
Sbjct: 451 CKENVEGGDCGRCKAGFFN 469
Score = 83 (34.3 bits), Expect = 8.0e-08, Sum P(2) = 8.0e-08
Identities = 30/109 (27%), Positives = 42/109 (38%)
Query: 202 CKCNGHASRCIKSPQGELVCECRHNTAGKDCEKCKPFFSDRPWGRATV-YDAN------- 253
C N S + G+ CEC+ N G+ C++CKP GR V N
Sbjct: 883 CHVNSSLSESCHARTGQ--CECKPNVQGRRCDECKPETFGLQSGRGCVPCKCNSFGSKSF 940
Query: 254 ECK-GGRCKCN-G----HASRCIKS-----PQGALVCECRHNTAGKDCE 291
+C+ G+C C G RC G C+C H G +C+
Sbjct: 941 DCEESGQCWCQPGVTGKKCDRCAHGYFNFQEGGCTACDCSH--LGNNCD 987
Score = 77 (32.2 bits), Expect = 2.9e-08, Sum P(3) = 2.9e-08
Identities = 23/72 (31%), Positives = 31/72 (43%)
Query: 202 CKCNGHASRCIKSPQGELVCECRHNTAGKDCEKCKPFFSDRPWGRATVYDANECKG-GRC 260
C C+G S G C C+ N G DC +CK F + + + N KG C
Sbjct: 432 CNCSGAGSTNEDPCFGP--CNCKENVEGGDCGRCKAGFFN-------LQEDNH-KGCDEC 481
Query: 261 KCNGHASRCIKS 272
C+G + RC S
Sbjct: 482 FCSGVSDRCQSS 493
Score = 74 (31.1 bits), Expect = 6.8e-07, Sum P(2) = 6.8e-07
Identities = 18/69 (26%), Positives = 29/69 (42%)
Query: 192 TDRHKKQGG---RCKCNGHASRCIKSPQGELVCECRHNTAGKDCEKCKPFFSDRPWGRAT 248
T + GG C+C+ S + +C CR G C+ C+P + + G
Sbjct: 1477 TGSPRSPGGTCQECECDPQGSLPLPCDPATGLCTCRPGATGPKCDGCQPGHARQ--GSEC 1534
Query: 249 VYDANECKG 257
V+ +EC G
Sbjct: 1535 VFCGDECTG 1543
Score = 68 (29.0 bits), Expect = 2.8e-06, Sum P(2) = 2.8e-06
Identities = 31/117 (26%), Positives = 41/117 (35%)
Query: 199 GGRC-KCN----GHA-----SRCIKSPQGELVCECRHNTAGKDCEKCKPFFSDRPWGRAT 248
G +C KC+ GH+ C S G L +C NT C C P FS
Sbjct: 1001 GEKCSKCSPNTWGHSIITGCKACNCSTVGSLDFQCNINTG--QCS-CHPKFSGAKCTECN 1057
Query: 249 VYDAN--ECKGGRC--------KCNGHASRCIKSPQGALVCECRHNTAGKDCEKCKP 295
N C C C+ +C Q C C+ N G C++C+P
Sbjct: 1058 QGHWNYPHCSPCECFLPGTDDRTCDPETKKCSCVDQTGQ-CTCKVNVEGVHCDRCRP 1113
Score = 55 (24.4 bits), Expect = 2.9e-08, Sum P(3) = 2.9e-08
Identities = 12/32 (37%), Positives = 15/32 (46%)
Query: 272 SPQGALV--CECRHNTAGKDCEKCKPFFSDRP 301
+P L+ CEC +G CE C P F P
Sbjct: 1334 APPARLIERCECPAGHSGLSCEACGPGFYRLP 1365
Score = 45 (20.9 bits), Expect = 0.00062, Sum P(2) = 0.00062
Identities = 9/19 (47%), Positives = 13/19 (68%)
Query: 65 CDT-SGACHVCDAGSPRGR 82
CD+ SG+C +C G+ GR
Sbjct: 842 CDSLSGSCRICKPGTA-GR 859
>UNIPROTKB|F1PVY5 [details] [associations]
symbol:LAMA2 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0045995 "regulation of embryonic development"
evidence=IEA] [GO:0030334 "regulation of cell migration"
evidence=IEA] [GO:0030155 "regulation of cell adhesion"
evidence=IEA] [GO:0007155 "cell adhesion" evidence=IEA] [GO:0005606
"laminin-1 complex" evidence=IEA] [GO:0005102 "receptor binding"
evidence=IEA] InterPro:IPR009254 InterPro:IPR010307 Pfam:PF06008
Pfam:PF06009 GO:GO:0030155 GO:GO:0007155 Gene3D:2.60.120.200
InterPro:IPR008985 InterPro:IPR013320 SUPFAM:SSF49899 GO:GO:0030334
InterPro:IPR008979 SUPFAM:SSF49785 InterPro:IPR002049
InterPro:IPR001791 Pfam:PF00053 Pfam:PF00054 SMART:SM00180
SMART:SM00282 PROSITE:PS01248 PROSITE:PS50027 PROSITE:PS50025
Pfam:PF02210 GO:GO:0045995 GeneTree:ENSGT00700000104140
InterPro:IPR018031 InterPro:IPR000034 InterPro:IPR008211
Pfam:PF00052 Pfam:PF00055 SMART:SM00281 SMART:SM00136
PROSITE:PS51115 PROSITE:PS51117 GO:GO:0005606 OMA:NCNSFGS
EMBL:AAEX03000448 EMBL:AAEX03000449 EMBL:AAEX03000450
EMBL:AAEX03000451 EMBL:AAEX03000452 EMBL:AAEX03000453
Ensembl:ENSCAFT00000001697 Uniprot:F1PVY5
Length = 3109
Score = 190 (71.9 bits), Expect = 1.0e-19, Sum P(2) = 1.0e-19
Identities = 47/128 (36%), Positives = 55/128 (42%)
Query: 199 GGRCKCNGHASRCIKSP-QGELVCECRHNTAGKDCEKCKPFFSDRPWGRATVYDANECKG 257
GG C C GHA C P + CEC HNT G C++C P F +PW T EC+
Sbjct: 252 GGMCICYGHARACPLDPVTNKSRCECEHNTCGDSCDQCCPGFHQKPWRAGTFLTKTECEA 311
Query: 258 GRCKCNGHASRCIKSPQ---------------GALVC-ECRHNTAGKDCEKC-KPFFSDR 300
C C+G A C G VC C NTAG +CE C FF R
Sbjct: 312 --CNCHGKAEECYYDENVARRNLSLNIHGKYIGGGVCINCTQNTAGINCETCIDGFF--R 367
Query: 301 PWGRATVY 308
P G + Y
Sbjct: 368 PKGVSPSY 375
Score = 143 (55.4 bits), Expect = 3.8e-14, Sum P(2) = 3.8e-14
Identities = 32/88 (36%), Positives = 41/88 (46%)
Query: 228 AGKDCEKCKPFFSDRPWGRATVYDANECKGGRCKCNGHASRCIKSP-QGALVCECRHNTA 286
A KD + P + R + +V D + GG C C GHA C P CEC HNT
Sbjct: 227 AHKDPREIDPIVTRRYY--YSVKDISV--GGMCICYGHARACPLDPVTNKSRCECEHNTC 282
Query: 287 GKDCEKCKPFFSDRPWGRATVYDANECK 314
G C++C P F +PW T EC+
Sbjct: 283 GDSCDQCCPGFHQKPWRAGTFLTKTECE 310
Score = 128 (50.1 bits), Expect = 1.0e-19, Sum P(2) = 1.0e-19
Identities = 46/175 (26%), Positives = 76/175 (43%)
Query: 39 PDFVNAAFGQEVKVNSVCGLESPERYCDT----------SGACHVCDAGS--PRGRFPAE 86
P +N A + N+ CG + PE YC + C +C+ S P R P
Sbjct: 9 PAVLNLASNALITTNATCGEKGPEMYCKLVEHVPGQPVRNPQCRICNQNSSNPYQRHPIT 68
Query: 87 YLTDLNNPSNVTCWRSEAQTSVNSLSASPDNVTLTLSLGKKFELTYISLSFCPKSIKPDS 146
D N T W+S S+ + VT+TL L + F++ Y+ + S +P +
Sbjct: 69 NAIDGKN----TWWQSP---SIKN-GIEYHYVTITLDLQQVFQIAYVIVK-AANSPRPGN 119
Query: 147 LAIYKSQDFGKSWQPLQFYS---SQCKKLYG-RTATGVISRGNEQEALCTDRHKK 197
+ +S D G ++P Q+++ ++C LY TG S + E +CT + K
Sbjct: 120 WILERSLD-GVDYRPWQYHAVTDTECLALYNIYPRTGPPSYAKDDEVICTSFYSK 173
Score = 128 (50.1 bits), Expect = 1.9e-12, Sum P(2) = 1.9e-12
Identities = 31/85 (36%), Positives = 42/85 (49%)
Query: 214 SPQGELV--CECRHNTAGKDCEKCKPFFSDRPW--GRATVYDA-NECKGGRCKCNGHASR 268
+P L+ CEC +G CE C P F P G A A C C+C+GH+S
Sbjct: 1357 APPARLIERCECPAGHSGLSCEACGPGFYRLPSEPGSAAARPALGPCVP--CQCHGHSSL 1414
Query: 269 CIKSPQGALVCECRHNTAGKDCEKC 293
C P+ + C+H+TAG CE+C
Sbjct: 1415 C--DPETSKCQNCQHHTAGDFCERC 1437
Score = 119 (46.9 bits), Expect = 1.6e-11, Sum P(2) = 1.6e-11
Identities = 31/97 (31%), Positives = 44/97 (45%)
Query: 202 CKCNGHASRCIKSPQGELV--CE-CRHNTAGKDCEKCKPFFSDRPWGRATVYDANECKGG 258
C+CN + I L C C+ TAG+ CE C +D +G A +A C+
Sbjct: 851 CQCNDNLDFSIPGSCDSLSGSCRICKPGTAGRRCELC----ADGYFGDAV--EAKNCQPC 904
Query: 259 RCKCNGHASRCIKSPQGALVCECRHNTAGKDCEKCKP 295
C N S + G CEC+ N G+ C++CKP
Sbjct: 905 GCHVNSSLSESCHARTGQ--CECKPNVQGRRCDECKP 939
Score = 112 (44.5 bits), Expect = 8.4e-11, Sum P(2) = 8.4e-11
Identities = 33/121 (27%), Positives = 47/121 (38%)
Query: 198 QGGR----CKCNGHASRCIKSPQ-GELVCECRHNTAGKDCEKCKPFFSDRPWGRATVYDA 252
Q GR CKCN S+ + G+ C C+ GK C++C + + G T
Sbjct: 945 QSGRGCVPCKCNSFGSKSFDCEESGQ--CWCQPGVTGKKCDRCAHGYFNFQEGGCTA--- 999
Query: 253 NECKGGRCKCNGHASRCIKSPQGALVCECRHNTAGKDCEKCKPFFSDRPWGRATVYDANE 312
C C+ + C P+ C C NT G+ C KC P WG + +
Sbjct: 1000 -------CDCSHLGNNC--DPKTGQ-CICPPNTVGEKCSKCSP----NTWGHSIITGCKA 1045
Query: 313 C 313
C
Sbjct: 1046 C 1046
Score = 110 (43.8 bits), Expect = 1.3e-10, Sum P(2) = 1.3e-10
Identities = 32/120 (26%), Positives = 51/120 (42%)
Query: 202 CKCNGHASRCIKSPQGELVCECRHNTAGKDCEKCKPFFSDRPWGRATVYDANECKGGRCK 261
C+C+GH+S C P+ C+H+TAG CE+C + G N+C+ +C
Sbjct: 1406 CQCHGHSSLC--DPETSKCQNCQHHTAGDFCERCALGYYGIVRGLP-----NDCQ--QCA 1456
Query: 262 C------NGHASRCIKSPQGALVCE-CRHNTAGKDCEKCKPFFSDRPWGRATVYDANECK 314
C N + C+ C C G+ CE+C ++ P R+ EC+
Sbjct: 1457 CPLISSSNNFSPSCVLEGLDDYRCTACPRGYEGQYCERCSAGYTGSP--RSPGGTCQECE 1514
Score = 92 (37.4 bits), Expect = 9.7e-09, Sum P(2) = 9.7e-09
Identities = 25/110 (22%), Positives = 44/110 (40%)
Query: 205 NGHASRCIKSPQGELVCE-CRHNTAGKDCEKCKPFFSDRPWGRATVYDANECKGGRCKCN 263
N + C+ + C C G+ CE+C ++ P R+ C+ C+C+
Sbjct: 1464 NNFSPSCVLEGLDDYRCTACPRGYEGQYCERCSAGYTGSP--RSP---GGTCQ--ECECD 1516
Query: 264 GHASRCIKSPQGALVCECRHNTAGKDCEKCKPFFSDRPWGRATVYDANEC 313
S + +C CR G C+ C+P + + G V+ +EC
Sbjct: 1517 PQGSLPLPCDPATGLCTCRPGATGPKCDGCQPGHARQ--GSECVFCGDEC 1564
Score = 91 (37.1 bits), Expect = 1.2e-08, Sum P(2) = 1.2e-08
Identities = 29/91 (31%), Positives = 40/91 (43%)
Query: 220 VC-ECRHNTAGKDCEKC-KPFFSDRPWGRATVYDANECKGGRCKCNGHASR-CIKSPQGA 276
VC C NTAG +CE C FF RP G + Y C+ C G + C+K + A
Sbjct: 345 VCINCTQNTAGINCETCIDGFF--RPKGVSPSYP-RPCQPCHCDPVGSLNEVCVKDEKRA 401
Query: 277 ---LV---CECRHNTAGKDCEKCKPFFSDRP 301
L C C+ G C++C ++ P
Sbjct: 402 RRGLAPGSCHCKPGFRGVSCDRCARGYTGYP 432
Score = 86 (35.3 bits), Expect = 4.0e-08, Sum P(2) = 4.0e-08
Identities = 23/79 (29%), Positives = 33/79 (41%)
Query: 221 CECRHNTAGKDCEKCKPFFSDRPWGRATVYDANECKGGRCKCNGHASRCIKSPQGALVCE 280
C C+ G C++C ++ P +CK C C+G S G C
Sbjct: 410 CHCKPGFRGVSCDRCARGYTGYP----------DCKP--CNCSGAGSTNEDPCFGP--CN 455
Query: 281 CRHNTAGKDCEKCKP-FFS 298
C+ N G DC +CK FF+
Sbjct: 456 CKENVEGGDCGRCKAGFFN 474
Score = 84 (34.6 bits), Expect = 6.4e-08, Sum P(2) = 6.4e-08
Identities = 31/109 (28%), Positives = 43/109 (39%)
Query: 220 VCECRHNTAGKDCEKCK---------PFFSDRP-WGR-----ATVYDANECKGGRCKCNG 264
VC+C +G CEK + P + + W R TV+ C+ C+C G
Sbjct: 691 VCQCPPGYSGSSCEKRQQANASSNLIPASNTKSCWPRHRRVNGTVF-GGICEP--CQCFG 747
Query: 265 HASRCIKSPQGALVCECRHNTAGKDCEKCKPFFSDRPWGRATVYDANEC 313
HA C L C+ +T G C +C P F P + T D C
Sbjct: 748 HAESCDDLTGECL--NCKDHTGGPHCNQCLPGFYGDP-SKGTSEDCLPC 793
Score = 83 (34.3 bits), Expect = 8.2e-08, Sum P(2) = 8.2e-08
Identities = 30/109 (27%), Positives = 42/109 (38%)
Query: 202 CKCNGHASRCIKSPQGELVCECRHNTAGKDCEKCKPFFSDRPWGRATV-YDAN------- 253
C N S + G+ CEC+ N G+ C++CKP GR V N
Sbjct: 906 CHVNSSLSESCHARTGQ--CECKPNVQGRRCDECKPETFGLQSGRGCVPCKCNSFGSKSF 963
Query: 254 ECK-GGRCKCN-G----HASRCIKS-----PQGALVCECRHNTAGKDCE 291
+C+ G+C C G RC G C+C H G +C+
Sbjct: 964 DCEESGQCWCQPGVTGKKCDRCAHGYFNFQEGGCTACDCSH--LGNNCD 1010
Score = 77 (32.2 bits), Expect = 2.9e-08, Sum P(3) = 2.9e-08
Identities = 23/72 (31%), Positives = 31/72 (43%)
Query: 202 CKCNGHASRCIKSPQGELVCECRHNTAGKDCEKCKPFFSDRPWGRATVYDANECKG-GRC 260
C C+G S G C C+ N G DC +CK F + + + N KG C
Sbjct: 437 CNCSGAGSTNEDPCFGP--CNCKENVEGGDCGRCKAGFFN-------LQEDNH-KGCDEC 486
Query: 261 KCNGHASRCIKS 272
C+G + RC S
Sbjct: 487 FCSGVSDRCQSS 498
Score = 74 (31.1 bits), Expect = 6.9e-07, Sum P(2) = 6.9e-07
Identities = 18/69 (26%), Positives = 29/69 (42%)
Query: 192 TDRHKKQGG---RCKCNGHASRCIKSPQGELVCECRHNTAGKDCEKCKPFFSDRPWGRAT 248
T + GG C+C+ S + +C CR G C+ C+P + + G
Sbjct: 1500 TGSPRSPGGTCQECECDPQGSLPLPCDPATGLCTCRPGATGPKCDGCQPGHARQ--GSEC 1557
Query: 249 VYDANECKG 257
V+ +EC G
Sbjct: 1558 VFCGDECTG 1566
Score = 68 (29.0 bits), Expect = 2.8e-06, Sum P(2) = 2.8e-06
Identities = 31/117 (26%), Positives = 41/117 (35%)
Query: 199 GGRC-KCN----GHA-----SRCIKSPQGELVCECRHNTAGKDCEKCKPFFSDRPWGRAT 248
G +C KC+ GH+ C S G L +C NT C C P FS
Sbjct: 1024 GEKCSKCSPNTWGHSIITGCKACNCSTVGSLDFQCNINTG--QCS-CHPKFSGAKCTECN 1080
Query: 249 VYDAN--ECKGGRC--------KCNGHASRCIKSPQGALVCECRHNTAGKDCEKCKP 295
N C C C+ +C Q C C+ N G C++C+P
Sbjct: 1081 QGHWNYPHCSPCECFLPGTDDRTCDPETKKCSCVDQTGQ-CTCKVNVEGVHCDRCRP 1136
Score = 55 (24.4 bits), Expect = 2.9e-08, Sum P(3) = 2.9e-08
Identities = 12/32 (37%), Positives = 15/32 (46%)
Query: 272 SPQGALV--CECRHNTAGKDCEKCKPFFSDRP 301
+P L+ CEC +G CE C P F P
Sbjct: 1357 APPARLIERCECPAGHSGLSCEACGPGFYRLP 1388
Score = 45 (20.9 bits), Expect = 0.00063, Sum P(2) = 0.00063
Identities = 9/19 (47%), Positives = 13/19 (68%)
Query: 65 CDT-SGACHVCDAGSPRGR 82
CD+ SG+C +C G+ GR
Sbjct: 865 CDSLSGSCRICKPGTA-GR 882
>UNIPROTKB|P24043 [details] [associations]
symbol:LAMA2 "Laminin subunit alpha-2" species:9606 "Homo
sapiens" [GO:0005102 "receptor binding" evidence=IEA] [GO:0005606
"laminin-1 complex" evidence=IEA] [GO:0030155 "regulation of cell
adhesion" evidence=IEA] [GO:0030334 "regulation of cell migration"
evidence=IEA] [GO:0045995 "regulation of embryonic development"
evidence=IEA] [GO:0007155 "cell adhesion" evidence=IEA] [GO:0007411
"axon guidance" evidence=IEA] [GO:0032224 "positive regulation of
synaptic transmission, cholinergic" evidence=IEA] [GO:0042383
"sarcolemma" evidence=IEA] [GO:0005604 "basement membrane"
evidence=IDA] [GO:0005198 "structural molecule activity"
evidence=TAS] [GO:0007517 "muscle organ development" evidence=TAS]
[GO:0005576 "extracellular region" evidence=TAS] [GO:0031012
"extracellular matrix" evidence=ISS] InterPro:IPR009254
InterPro:IPR010307 Pfam:PF06008 Pfam:PF06009
Pathway_Interaction_DB:a6b1_a6b4_integrin_pathway
Reactome:REACT_111102 GO:GO:0007411 GO:GO:0030155 GO:GO:0005198
GO:GO:0007155 GO:GO:0042383 PROSITE:PS00022 Gene3D:2.60.120.200
InterPro:IPR008985 InterPro:IPR013320 SUPFAM:SSF49899 GO:GO:0030334
GO:GO:0007517 PROSITE:PS01186 InterPro:IPR002049 InterPro:IPR001791
Pfam:PF00053 Pfam:PF00054 SMART:SM00180 SMART:SM00282
PROSITE:PS01248 PROSITE:PS50027 PROSITE:PS50025
Pathway_Interaction_DB:amb2_neutrophils_pathway GO:GO:0005604
Pfam:PF02210 GO:GO:0045995 GO:GO:0032224 InterPro:IPR018031
InterPro:IPR000034 InterPro:IPR008211 Pfam:PF00052 Pfam:PF00055
SMART:SM00281 SMART:SM00136 PROSITE:PS51115 PROSITE:PS51117
HOGENOM:HOG000293201 HOVERGEN:HBG052298 KO:K05637 GO:GO:0005606
EMBL:Z26653 EMBL:U66796 EMBL:U66733 EMBL:U66734 EMBL:U66735
EMBL:U66736 EMBL:U66737 EMBL:U66738 EMBL:U66739 EMBL:U66740
EMBL:U66741 EMBL:U66742 EMBL:U66743 EMBL:U66745 EMBL:U66746
EMBL:U66747 EMBL:U66748 EMBL:U66749 EMBL:U66750 EMBL:U66751
EMBL:U66752 EMBL:U66753 EMBL:U66754 EMBL:U66755 EMBL:U66756
EMBL:U66757 EMBL:U66758 EMBL:U66759 EMBL:U66760 EMBL:U66761
EMBL:U66762 EMBL:U66763 EMBL:U66764 EMBL:U66765 EMBL:U66766
EMBL:U66768 EMBL:U66769 EMBL:U66770 EMBL:U66771 EMBL:U66772
EMBL:U66773 EMBL:U66774 EMBL:U66775 EMBL:U66776 EMBL:U66777
EMBL:U66778 EMBL:U66779 EMBL:U66780 EMBL:U66781 EMBL:U66782
EMBL:U66783 EMBL:U66784 EMBL:U66785 EMBL:U66786 EMBL:U66787
EMBL:U66788 EMBL:U66789 EMBL:U66790 EMBL:U66791 EMBL:U66792
EMBL:U66793 EMBL:U66794 EMBL:U66795 EMBL:AL583853 EMBL:AL356124
EMBL:AL445439 EMBL:AL513527 EMBL:AL590613 EMBL:AL669984
EMBL:AL589927 EMBL:M59832 IPI:IPI00873889 PIR:PX0082
RefSeq:NP_000417.2 RefSeq:NP_001073291.1 UniGene:Hs.200841
ProteinModelPortal:P24043 SMR:P24043 DIP:DIP-42562N IntAct:P24043
MINT:MINT-2635209 STRING:P24043 PhosphoSite:P24043 DMDM:215274259
PaxDb:P24043 PRIDE:P24043 DNASU:3908 Ensembl:ENST00000421865
GeneID:3908 KEGG:hsa:3908 UCSC:uc003qbn.3 CTD:3908
GeneCards:GC06P129246 HGNC:HGNC:6482 HPA:CAB040310 MIM:156225
MIM:607855 neXtProt:NX_P24043 Orphanet:258 PharmGKB:PA30271
eggNOG:COG0419 OMA:NCNSFGS OrthoDB:EOG4RFKRM PhylomeDB:P24043
GenomeRNAi:3908 NextBio:15339 ArrayExpress:P24043 Bgee:P24043
CleanEx:HS_LAMA2 Genevestigator:P24043 GermOnline:ENSG00000196569
Uniprot:P24043
Length = 3122
Score = 191 (72.3 bits), Expect = 1.6e-19, Sum P(2) = 1.6e-19
Identities = 47/127 (37%), Positives = 56/127 (44%)
Query: 199 GGRCKCNGHASRCIKSPQ-GELVCECRHNTAGKDCEKCKPFFSDRPWGRATVYDANECKG 257
GG C C GHA C P + CEC HNT G C++C P F +PW T EC+
Sbjct: 284 GGMCICYGHARACPLDPATNKSRCECEHNTCGDSCDQCCPGFHQKPWRAGTFLTKTECEA 343
Query: 258 GRCKCNGHASRC--------------IKSPQ-GALVC-ECRHNTAGKDCEKCKPFFSDRP 301
C C+G A C I+ G VC C NTAG +CE C F RP
Sbjct: 344 --CNCHGKAEECYYDENVARRNLSLNIRGKYIGGGVCINCTQNTAGINCETCTDGFF-RP 400
Query: 302 WGRATVY 308
G + Y
Sbjct: 401 KGVSPNY 407
Score = 143 (55.4 bits), Expect = 7.8e-14, Sum P(2) = 7.8e-14
Identities = 32/88 (36%), Positives = 41/88 (46%)
Query: 228 AGKDCEKCKPFFSDRPWGRATVYDANECKGGRCKCNGHASRCIKSPQ-GALVCECRHNTA 286
A KD + P + R + +V D + GG C C GHA C P CEC HNT
Sbjct: 259 AHKDPREIDPIVTRRYY--YSVKDISV--GGMCICYGHARACPLDPATNKSRCECEHNTC 314
Query: 287 GKDCEKCKPFFSDRPWGRATVYDANECK 314
G C++C P F +PW T EC+
Sbjct: 315 GDSCDQCCPGFHQKPWRAGTFLTKTECE 342
Score = 141 (54.7 bits), Expect = 1.3e-13, Sum P(2) = 1.3e-13
Identities = 30/85 (35%), Positives = 44/85 (51%)
Query: 214 SPQGELV--CECRHNTAGKDCEKCKPFF---SDRPWGRATVYDANECKGGRCKCNGHASR 268
+P +L+ C+C +G CE C P F +P GR C C+CNGH+S
Sbjct: 1371 TPPADLIEKCDCPLGYSGLSCEACLPGFYRLRSQPGGRTPGPTLGTCVP--CQCNGHSSL 1428
Query: 269 CIKSPQGALVCECRHNTAGKDCEKC 293
C P+ ++ C+H+TAG CE+C
Sbjct: 1429 C--DPETSICQNCQHHTAGDFCERC 1451
Score = 126 (49.4 bits), Expect = 6.4e-12, Sum P(2) = 6.4e-12
Identities = 34/96 (35%), Positives = 43/96 (44%)
Query: 202 CKCNGHASRCIKSPQGELV--CE-CRHNTAGKDCEKCKPFFSDRPWGRATVYDANECKGG 258
C+CN + I L C C+ T G+ CE C +D +G A DA C+
Sbjct: 865 CQCNDNLDFSIPGSCDSLSGSCLICKPGTTGRYCELC----ADGYFGDAV--DAKNCQPC 918
Query: 259 RCKCNGHASRCIKSPQGALVCECRHNTAGKDCEKCK 294
RC G S S G CECR N G+ C+KCK
Sbjct: 919 RCNAGGSFSEVCHSQTGQ--CECRANVQGQRCDKCK 952
Score = 125 (49.1 bits), Expect = 1.6e-19, Sum P(2) = 1.6e-19
Identities = 46/179 (25%), Positives = 76/179 (42%)
Query: 35 RRCIPDFVNAAFGQEVKVNSVCGLESPERYCDT----------SGACHVCDAGS--PRGR 82
R P +N A + N+ CG + PE YC + C +C+ S P R
Sbjct: 37 RGLFPAVLNLASNALITTNATCGEKGPEMYCKLVEHVPGQPVRNPQCRICNQNSSNPNQR 96
Query: 83 FPAEYLTDLNNPSNVTCWRSEAQTSVNSLSASPDNVTLTLSLGKKFELTYISLSFCPKSI 142
P D N T W+S S+ + VT+TL L + F++ Y+ + S
Sbjct: 97 HPITNAIDGKN----TWWQSP---SIKN-GIEYHYVTITLDLQQVFQIAYVIVK-AANSP 147
Query: 143 KPDSLAIYKSQDFGKSWQPLQFYS---SQCKKLYG-RTATGVISRGNEQEALCTDRHKK 197
+P + + +S D ++P Q+++ ++C LY TG S + E +CT + K
Sbjct: 148 RPGNWILERSLD-DVEYKPWQYHAVTDTECLTLYNIYPRTGPPSYAKDDEVICTSFYSK 205
Score = 125 (49.1 bits), Expect = 8.3e-12, Sum P(2) = 8.3e-12
Identities = 31/107 (28%), Positives = 48/107 (44%)
Query: 202 CKCNGHASRCIKSPQGELVCECRHNTAGKDCEKCKPFFSDRPWGRATVYDANECKGGRCK 261
C+CNGH+S C P+ + C+H+TAG CE+C + G N+C+ +C
Sbjct: 1420 CQCNGHSSLC--DPETSICQNCQHHTAGDFCERCALGYYGIVKGLP-----NDCQ--QCA 1470
Query: 262 C------NGHASRCIKSPQGALVCE-CRHNTAGKDCEKCKPFFSDRP 301
C N + C+ C C G+ CE+C P ++ P
Sbjct: 1471 CPLISSSNNFSPSCVAEGLDDYRCTACPRGYEGQYCERCAPGYTGSP 1517
Score = 122 (48.0 bits), Expect = 1.7e-11, Sum P(2) = 1.7e-11
Identities = 36/128 (28%), Positives = 52/128 (40%)
Query: 184 GNEQEALCTDRHKKQGGR--------CKCNGHASRCIKSPQGELVCECRHNTAGKDCEKC 235
G+ E+ C RH++ G C+C GHA C GE + C+ +T G C+KC
Sbjct: 732 GSSCES-CWPRHRRVNGTIFGGICEPCQCFGHAESC-DDVTGECL-NCKDHTGGPYCDKC 788
Query: 236 KPFFSDRPWGRATVYDANECKGG-RCKCNGHASRCIKSPQGALVCE-CRHNTAGKDCEKC 293
P F P + T D C N + C L+C+ C G CE+C
Sbjct: 789 LPGFYGEPT-KGTSEDCQPCACPLNIPSNNFSPTCHLDRSLGLICDGCPVGYTGPRCERC 847
Query: 294 KPFFSDRP 301
+ +P
Sbjct: 848 AEGYFGQP 855
Score = 121 (47.7 bits), Expect = 2.1e-11, Sum P(2) = 2.1e-11
Identities = 30/94 (31%), Positives = 40/94 (42%)
Query: 202 CKCN--GHASRCIKSPQGELVCECRHNTAGKDCEKCKPFFSDRPWGRATVYDANECKGGR 259
C+CN G S S G+ CECR N G+ C+KCK G + A C
Sbjct: 918 CRCNAGGSFSEVCHSQTGQ--CECRANVQGQRCDKCKA-------GTFGLQSARGCVP-- 966
Query: 260 CKCNGHASRCIKSPQGALVCECRHNTAGKDCEKC 293
C CN S+ + C C+ GK C++C
Sbjct: 967 CNCNSFGSKSFDCEESGQ-CWCQPGVTGKKCDRC 999
Score = 117 (46.2 bits), Expect = 5.6e-11, Sum P(2) = 5.6e-11
Identities = 38/138 (27%), Positives = 56/138 (40%)
Query: 185 NEQEALCTDRHKKQGGRC-KCNGHASRCIKSPQGELVCECRH-NTAGKDCEK-----CKP 237
+ Q C R QG RC KC + ++S +G + C C + DCE+ C+P
Sbjct: 931 HSQTGQCECRANVQGQRCDKCKA-GTFGLQSARGCVPCNCNSFGSKSFDCEESGQCWCQP 989
Query: 238 FFSDRPWGRATVYDANECKGG--RCKCNGHASRCIKSPQGALVCECRHNTAGKDCEKCKP 295
+ + R N +GG C+C+ + C P+ C C NT G+ C KC P
Sbjct: 990 GVTGKKCDRCAHGYFNFQEGGCTACECSHLGNNC--DPKTGR-CICPPNTIGEKCSKCAP 1046
Query: 296 FFSDRPWGRATVYDANEC 313
WG + C
Sbjct: 1047 ----NTWGHSITTGCKAC 1060
Score = 113 (44.8 bits), Expect = 1.4e-10, Sum P(2) = 1.4e-10
Identities = 31/94 (32%), Positives = 41/94 (43%)
Query: 220 VCECRHNTAGKDCEKCKPFFSDRPWGRATVYDANECKGGRCKCNGHASRCIKSPQGALVC 279
VC+C G CE C P R G T++ C+ C+C GHA C G +
Sbjct: 723 VCQCPPGYTGSSCESCWPRHR-RVNG--TIF-GGICEP--CQCFGHAESC-DDVTGECL- 774
Query: 280 ECRHNTAGKDCEKCKPFFSDRPWGRATVYDANEC 313
C+ +T G C+KC P F P + T D C
Sbjct: 775 NCKDHTGGPYCDKCLPGFYGEPT-KGTSEDCQPC 807
Score = 104 (41.7 bits), Expect = 1.2e-09, Sum P(2) = 1.2e-09
Identities = 26/110 (23%), Positives = 44/110 (40%)
Query: 205 NGHASRCIKSPQGELVCE-CRHNTAGKDCEKCKPFFSDRPWGRATVYDANECKGGRCKCN 263
N + C+ + C C G+ CE+C P ++ P G C+ C+C+
Sbjct: 1478 NNFSPSCVAEGLDDYRCTACPRGYEGQYCERCAPGYTGSP-GNP----GGSCQ--ECECD 1530
Query: 264 GHASRCIKSPQGALVCECRHNTAGKDCEKCKPFFSDRPWGRATVYDANEC 313
+ S + C CR G+ C+ CK + + W V+ +EC
Sbjct: 1531 PYGSLPVPCDPVTGFCTCRPGATGRKCDGCKHWHAREGW--ECVFCGDEC 1578
Score = 92 (37.4 bits), Expect = 2.1e-08, Sum P(2) = 2.1e-08
Identities = 28/90 (31%), Positives = 39/90 (43%)
Query: 220 VC-ECRHNTAGKDCEKCKPFFSDRPWGRATVYDANECKGGRCKCNGHASR-CIKSPQGA- 276
VC C NTAG +CE C F RP G + Y C+ C G + C+K + A
Sbjct: 377 VCINCTQNTAGINCETCTDGFF-RPKGVSPNYP-RPCQPCHCDPIGSLNEVCVKDEKHAR 434
Query: 277 --LV---CECRHNTAGKDCEKCKPFFSDRP 301
L C C+ G C++C ++ P
Sbjct: 435 RGLAPGSCHCKTGFGGVSCDRCARGYTGYP 464
Score = 90 (36.7 bits), Expect = 3.4e-08, Sum P(2) = 3.4e-08
Identities = 23/79 (29%), Positives = 34/79 (43%)
Query: 221 CECRHNTAGKDCEKCKPFFSDRPWGRATVYDANECKGGRCKCNGHASRCIKSPQGALVCE 280
C C+ G C++C ++ P +CK C C+G S+ G C
Sbjct: 442 CHCKTGFGGVSCDRCARGYTGYP----------DCKA--CNCSGLGSKNEDPCFGP--CI 487
Query: 281 CRHNTAGKDCEKCKP-FFS 298
C+ N G DC +CK FF+
Sbjct: 488 CKENVEGGDCSRCKSGFFN 506
Score = 84 (34.6 bits), Expect = 1.4e-07, Sum P(2) = 1.4e-07
Identities = 27/111 (24%), Positives = 41/111 (36%)
Query: 202 CKCNGHASRCIKSPQGELVCECRHNTAGKDCEKCKPFFSDRPWGRATVYDANECKGGRCK 261
C C+ S + C C +G C +C + P R + D
Sbjct: 1060 CNCSTVGSLDFQCNVNTGQCNCHPKFSGAKCTECSRGHWNYP--RCNLCDCFLPGTDATT 1117
Query: 262 CNGHASRCIKSPQGALVCECRHNTAGKDCEKCKP--FFSD--RPWGRATVY 308
C+ +C S Q C C+ N G C++C+P F D P G ++ Y
Sbjct: 1118 CDSETKKCSCSDQTGQ-CTCKVNVEGIHCDRCRPGKFGLDAKNPLGCSSCY 1167
Score = 77 (32.2 bits), Expect = 1.3e-07, Sum P(3) = 1.3e-07
Identities = 22/72 (30%), Positives = 31/72 (43%)
Query: 202 CKCNGHASRCIKSPQGELVCECRHNTAGKDCEKCKPFFSDRPWGRATVYDANECKG-GRC 260
C C+G S+ G C C+ N G DC +CK F + + KG C
Sbjct: 469 CNCSGLGSKNEDPCFGP--CICKENVEGGDCSRCKSGFFN--------LQEDNWKGCDEC 518
Query: 261 KCNGHASRCIKS 272
C+G ++RC S
Sbjct: 519 FCSGVSNRCQSS 530
Score = 76 (31.8 bits), Expect = 9.3e-07, Sum P(2) = 9.3e-07
Identities = 15/56 (26%), Positives = 25/56 (44%)
Query: 202 CKCNGHASRCIKSPQGELVCECRHNTAGKDCEKCKPFFSDRPWGRATVYDANECKG 257
C+C+ + S + C CR G+ C+ CK + + W V+ +EC G
Sbjct: 1527 CECDPYGSLPVPCDPVTGFCTCRPGATGRKCDGCKHWHAREGW--ECVFCGDECTG 1580
Score = 52 (23.4 bits), Expect = 1.3e-07, Sum P(3) = 1.3e-07
Identities = 13/38 (34%), Positives = 18/38 (47%)
Query: 272 SPQGALV--CECRHNTAGKDCEKCKPFF---SDRPWGR 304
+P L+ C+C +G CE C P F +P GR
Sbjct: 1371 TPPADLIEKCDCPLGYSGLSCEACLPGFYRLRSQPGGR 1408
Score = 45 (20.9 bits), Expect = 2.3e-05, Sum P(2) = 2.3e-05
Identities = 9/20 (45%), Positives = 14/20 (70%)
Query: 65 CDT-SGACHVCDAGSPRGRF 83
CD+ SG+C +C G+ GR+
Sbjct: 879 CDSLSGSCLICKPGTT-GRY 897
>UNIPROTKB|F1M1L0 [details] [associations]
symbol:RGD1565947 "Protein RGD1565947" species:10116
"Rattus norvegicus" [GO:0005576 "extracellular region"
evidence=IEA] InterPro:IPR001134 PROSITE:PS50189 GO:GO:0016322
InterPro:IPR002049 InterPro:IPR008993 Pfam:PF00053 SMART:SM00180
SUPFAM:SSF50242 PROSITE:PS01248 PROSITE:PS50027 GO:GO:0005604
InterPro:IPR018933 Pfam:PF01759 InterPro:IPR008211 Pfam:PF00055
PROSITE:PS51117 GO:GO:0060668 IPI:IPI00948933
Ensembl:ENSRNOT00000064724 ArrayExpress:F1M1L0 Uniprot:F1M1L0
Length = 408
Score = 234 (87.4 bits), Expect = 3.2e-19, P = 3.2e-19
Identities = 55/140 (39%), Positives = 70/140 (50%)
Query: 200 GRCKCNGHASRC--------IKSPQGELV----CECRHNTAGKDCEKCKPFFSDRPWGRA 247
G C CNGHA +C +K+P V C C+HNTAG C+ C P ++DRPW A
Sbjct: 66 GSCFCNGHADQCLPVEGFRPVKAPGAFHVVHGKCMCKHNTAGSHCQHCAPLYNDRPWEAA 125
Query: 248 TVYDA--NECKGGRCKCNGHASRC-----IKSPQGAL---VCE-CRHNTAGKDCEKCKP- 295
NEC+ CKCNGHA C + G VC C+HNT G+ C++CKP
Sbjct: 126 DGRTGAPNECR--TCKCNGHADTCHFDINVWEASGNRSGGVCNNCQHNTEGQHCQRCKPG 183
Query: 296 FFSD--RPWGRATVYDANEC 313
F+ D RP+ A C
Sbjct: 184 FYRDLRRPFSAPDACKACSC 203
Score = 134 (52.2 bits), Expect = 4.2e-06, P = 4.2e-06
Identities = 34/104 (32%), Positives = 45/104 (43%)
Query: 202 CKCNGHASRC-----IKSPQGEL---VCE-CRHNTAGKDCEKCKP-FFSD--RPWGRATV 249
CKCNGHA C + G VC C+HNT G+ C++CKP F+ D RP+
Sbjct: 138 CKCNGHADTCHFDINVWEASGNRSGGVCNNCQHNTEGQHCQRCKPGFYRDLRRPFSAPDA 197
Query: 250 YDANECKGGRCKCNGHASRCIKSPQGALVCECRHNTAGKDCEKC 293
A C +S P C C+ AG C++C
Sbjct: 198 CKACSCHPVGSAILPFSSVTFCDPSNG-DCPCKPGVAGPHCDRC 240
>UNIPROTKB|P25391 [details] [associations]
symbol:LAMA1 "Laminin subunit alpha-1" species:9606 "Homo
sapiens" [GO:0005102 "receptor binding" evidence=IEA] [GO:0030155
"regulation of cell adhesion" evidence=IEA] [GO:0030334 "regulation
of cell migration" evidence=IEA] [GO:0045995 "regulation of
embryonic development" evidence=IEA] [GO:0007155 "cell adhesion"
evidence=IEA] [GO:0002011 "morphogenesis of an epithelial sheet"
evidence=IEA] [GO:0005911 "cell-cell junction" evidence=IEA]
[GO:0043208 "glycosphingolipid binding" evidence=IEA] [GO:0045198
"establishment of epithelial cell apical/basal polarity"
evidence=IEA] [GO:0060441 "epithelial tube branching involved in
lung morphogenesis" evidence=IEA] [GO:0060445 "branching involved
in salivary gland morphogenesis" evidence=IEA] [GO:0061304 "retinal
blood vessel morphogenesis" evidence=IEA] [GO:0005606 "laminin-1
complex" evidence=IDA;IPI] [GO:0005608 "laminin-3 complex"
evidence=IPI] [GO:0005201 "extracellular matrix structural
constituent" evidence=ISS] [GO:0005578 "proteinaceous extracellular
matrix" evidence=ISS] [GO:0007166 "cell surface receptor signaling
pathway" evidence=ISS] [GO:0005615 "extracellular space"
evidence=IDA] [GO:0005604 "basement membrane" evidence=IDA]
[GO:0005576 "extracellular region" evidence=TAS] [GO:0007411 "axon
guidance" evidence=TAS] [GO:0031012 "extracellular matrix"
evidence=TAS] InterPro:IPR009254 InterPro:IPR010307 Pfam:PF06008
Pfam:PF06009 Pathway_Interaction_DB:a6b1_a6b4_integrin_pathway
Reactome:REACT_111045 Reactome:REACT_111102 GO:GO:0007411
GO:GO:0005615 GO:GO:0030155
Pathway_Interaction_DB:syndecan_2_pathway GO:GO:0007155
Pathway_Interaction_DB:glypican_1pathway GO:GO:0005911
PROSITE:PS00022 Gene3D:2.60.120.200 InterPro:IPR008985
InterPro:IPR013320 SUPFAM:SSF49899 GO:GO:0030334 GO:GO:0007166
Pathway_Interaction_DB:syndecan_4_pathway PROSITE:PS01186
InterPro:IPR002049 InterPro:IPR001791 Pfam:PF00053 Pfam:PF00054
SMART:SM00180 SMART:SM00282 PROSITE:PS01248 PROSITE:PS50027
PROSITE:PS50025 Pathway_Interaction_DB:amb2_neutrophils_pathway
DrugBank:DB00009 DrugBank:DB00029 DrugBank:DB00031 GO:GO:0060441
GO:GO:0060445 GO:GO:0045198 DrugBank:DB00015 GO:GO:0045995
GO:GO:0005201 GO:GO:0043208 GO:GO:0002011 InterPro:IPR018031
InterPro:IPR000034 InterPro:IPR008211 Pfam:PF00052 Pfam:PF00055
SMART:SM00281 SMART:SM00136 PROSITE:PS51115 PROSITE:PS51117
GO:GO:0061304 EMBL:AP002409 EMBL:AP005062 EMBL:AP005210 EMBL:X58531
IPI:IPI00375294 PIR:S14458 RefSeq:NP_005550.2 UniGene:Hs.270364
ProteinModelPortal:P25391 SMR:P25391 DIP:DIP-29324N
MINT:MINT-6740485 STRING:P25391 PhosphoSite:P25391 PaxDb:P25391
PRIDE:P25391 Ensembl:ENST00000389658 GeneID:284217 KEGG:hsa:284217
UCSC:uc002knm.3 CTD:284217 GeneCards:GC18M006941 H-InvDB:HIX0014316
HGNC:HGNC:6481 HPA:CAB010179 MIM:150320 neXtProt:NX_P25391
PharmGKB:PA30270 eggNOG:NOG247347 HOGENOM:HOG000293201
HOVERGEN:HBG052298 InParanoid:P25391 KO:K05637 OMA:EPFYWRL
OrthoDB:EOG4K3KVB ChiTaRS:LAMA1 GenomeRNAi:284217 NextBio:94628
ArrayExpress:P25391 Bgee:P25391 CleanEx:HS_LAMA1
Genevestigator:P25391 GermOnline:ENSG00000101680 GO:GO:0005606
GO:GO:0005608 Uniprot:P25391
Length = 3075
Score = 179 (68.1 bits), Expect = 3.4e-19, Sum P(2) = 3.4e-19
Identities = 45/133 (33%), Positives = 60/133 (45%)
Query: 199 GGRCKCNGHASRCI-KSPQGELVCECRHNTAGKDCEKCKPFFSDRPWGRATVYDANECKG 257
GG C C GHAS C +L C+C HNT G+ C +C P + +PW TV N C+
Sbjct: 267 GGMCICYGHASSCPWDETTKKLQCQCEHNTCGESCNRCCPGYHQQPWRPGTVSSGNTCEA 326
Query: 258 GRCKCNGHASRCI---------KSP------QGALVC-ECRHNTAGKDCEKCKPFFSDRP 301
C C+ A C KS +G VC C NT G +CE C + RP
Sbjct: 327 --CNCHNKAKDCYYDESVAKQKKSLNTAGQFRGGGVCINCLQNTMGINCETCIDGYY-RP 383
Query: 302 WGRATVYDANECK 314
+ + Y+ C+
Sbjct: 384 H-KVSPYEDEPCR 395
Score = 136 (52.9 bits), Expect = 3.4e-19, Sum P(2) = 3.4e-19
Identities = 46/181 (25%), Positives = 78/181 (43%)
Query: 33 RPRRCIPDFVNAAFGQEVKVNSVCGLESPERYCDT----------SGACHVCDAGS--PR 80
R R P +N A + N+ CG + PE +C + C +CD S PR
Sbjct: 18 RQRGLFPAILNLASNAHISTNATCGEKGPEMFCKLVEHVPGRPVRNPQCRICDGNSANPR 77
Query: 81 GRFPAEYLTDLNNPSNVTCWRSEAQTSVNSLSASPDNVTLTLSLGKKFELTYISLSFCPK 140
R P + D N W+S S+ + VT+TL L + F++ Y+ +
Sbjct: 78 ERHPISHAIDGTN----NWWQSP---SIQN-GREYHWVTITLDLRQVFQVAYVIIK-AAN 128
Query: 141 SIKPDSLAIYKSQDFGKSWQPLQFYS---SQCKKLYGRTAT-GVISRGNEQEALCTDRHK 196
+ +P + + +S D G ++ P Q+Y+ S+C Y T G + + E +CT +
Sbjct: 129 APRPGNWILERSLD-GTTFSPWQYYAVSDSECLSRYNITPRRGPPTYRADDEVICTSYYS 187
Query: 197 K 197
+
Sbjct: 188 R 188
Score = 136 (52.9 bits), Expect = 3.4e-14, Sum P(2) = 3.4e-14
Identities = 37/109 (33%), Positives = 50/109 (45%)
Query: 202 CKCNGHASRCIKSPQGELVC-ECRHNTAGKDCEKCKPFFSDRPWGRATVYDANECKGG-R 259
C+C+GHA+ C + G VC C HNT G CE+C P F P R T D C
Sbjct: 742 CECHGHAAEC--NVHG--VCIACAHNTTGVHCEQCLPGFYGEP-SRGTPGDCQPCACPLT 796
Query: 260 CKCNGHASRCIKSPQGALVCE-CRHNTAGKDCEKCKPFFSDRPWGRATV 307
N + C + +VC+ C +G CE+C +D +G TV
Sbjct: 797 IASNNFSPTCHLNDGDEVVCDWCAPGYSGAWCERC----ADGYYGNPTV 841
Score = 129 (50.5 bits), Expect = 1.8e-13, Sum P(2) = 1.8e-13
Identities = 32/93 (34%), Positives = 41/93 (44%)
Query: 221 CECRHNTAGKDCEKCKPFFSDRPWGRATVYDANECKGGRCKCNGHASRCIKSPQGALVCE 280
CEC G CE C + R G + C+ C+C+GHA+ C + G +
Sbjct: 709 CECPQGYTGTSCESCLSGYY-RVDG---ILFGGICQP--CECHGHAAEC--NVHGVCIA- 759
Query: 281 CRHNTAGKDCEKCKPFFSDRPWGRATVYDANEC 313
C HNT G CE+C P F P R T D C
Sbjct: 760 CAHNTTGVHCEQCLPGFYGEP-SRGTPGDCQPC 791
Score = 111 (44.1 bits), Expect = 1.3e-11, Sum P(2) = 1.3e-11
Identities = 30/97 (30%), Positives = 43/97 (44%)
Query: 202 CKCNGH-----ASRCIKSPQGELVCECRHNTAGKDCEKCKPFFSDRPWGRATVYDANECK 256
C C+G+ A C S GE + +C NT G CE+C F +G A A C+
Sbjct: 849 CDCSGNVDPSEAGHC-DSVTGECL-KCLGNTDGAHCERCADGF----YGDAVT--AKNCR 900
Query: 257 GGRCKCNGHASRCIKSPQGALVCECRHNTAGKDCEKC 293
C G S G +C+C+ N G+ C++C
Sbjct: 901 ACECHVKGSHSAVCHLETG--LCDCKPNVTGQQCDQC 935
Score = 104 (41.7 bits), Expect = 6.9e-11, Sum P(2) = 6.9e-11
Identities = 29/104 (27%), Positives = 41/104 (39%)
Query: 202 CKCNGHASRCIKSPQGELVCECRHNTAGKDCEKCKPFFSDRPWGRATVYDANECKGGRCK 261
C CN H+ C P C NTAG C+ C + +G+ T A++C C
Sbjct: 1403 CSCNNHSDTC--DPNTGKCLNCGDNTAGDHCDVCTSGY----YGKVTG-SASDCALCACP 1455
Query: 262 CNGHAS---RCIKSPQGALVCE-CRHNTAGKDCEKCKPFFSDRP 301
+ AS C+ C+ C GK CE+C + P
Sbjct: 1456 HSPPASFSPTCVLEGDHDFRCDACLLGYEGKHCERCSSSYYGNP 1499
Score = 100 (40.3 bits), Expect = 1.8e-10, Sum P(2) = 1.8e-10
Identities = 31/107 (28%), Positives = 42/107 (39%)
Query: 198 QGGRCK-CN-GHASRCIKSPQGELVCECRHNTAGKDCEKCKPFFSDRPWGRATVYDANE- 254
Q G C C+ H GE C C +T G CE+C+ D WG YDA
Sbjct: 991 QDGSCTPCDCPHTQNTCDPETGE--CVCPPHTQGVKCEECE----DGHWG----YDAEVG 1040
Query: 255 CKGGRCKCNGHASRCIKSPQGALVCECRHNTAGKDCEKCKPFFSDRP 301
C+ C G G C+C+ G+ C++C + D P
Sbjct: 1041 CQACNCSLVGSTHHRCDVVTGH--CQCKSKFGGRACDQCSLGYRDFP 1085
Score = 97 (39.2 bits), Expect = 3.7e-10, Sum P(2) = 3.7e-10
Identities = 23/77 (29%), Positives = 33/77 (42%)
Query: 221 CECRHNTAGKDCEKCKPFFSDRPWGRATVYDANECKGGRCKCNGHASRCIKSPQGALVCE 280
C C+ G+ C++C+ + D P C C CN S + G C
Sbjct: 427 CPCKEGYTGEKCDRCQLGYKDYP----------TCVS--CGCNPVGSASDEPCTGP--CV 472
Query: 281 CRHNTAGKDCEKCKPFF 297
C+ N GK C++CKP F
Sbjct: 473 CKENVEGKACDRCKPGF 489
Score = 97 (39.2 bits), Expect = 3.7e-10, Sum P(2) = 3.7e-10
Identities = 38/139 (27%), Positives = 59/139 (42%)
Query: 179 GVISRGNEQEALCTDRHKKQGGRCKCNGHASRCIKS--PQGEL----VC-ECRHNTAGKD 231
G +S GN EA C +K + C + ++ KS G+ VC C NT G +
Sbjct: 316 GTVSSGNTCEA-CNCHNKAKD--CYYDESVAKQKKSLNTAGQFRGGGVCINCLQNTMGIN 372
Query: 232 CEKCKPFFSDRPWGRATVYDANECKGGRCKCNGHASR-CIKSPQGALV--------CECR 282
CE C + RP + + Y+ C+ C G S CIK + + C C+
Sbjct: 373 CETCIDGYY-RPH-KVSPYEDEPCRPCNCDPVGSLSSVCIKDDLHSDLHNGKQPGQCPCK 430
Query: 283 HNTAGKDCEKCKPFFSDRP 301
G+ C++C+ + D P
Sbjct: 431 EGYTGEKCDRCQLGYKDYP 449
Score = 92 (37.4 bits), Expect = 1.2e-09, Sum P(2) = 1.2e-09
Identities = 19/74 (25%), Positives = 30/74 (40%)
Query: 221 CECRHNTAGKDCEKCKPFFSDRPWGRATVYDANECKGGRCKCNGHASRCIKSPQGALVCE 280
C+C+ G+ C++C + D P D G C C++ GA C
Sbjct: 1063 CQCKSKFGGRACDQCSLGYRDFPDCVPCDCDLRGTSGDACNLEQGLCGCVEET-GA--CP 1119
Query: 281 CRHNTAGKDCEKCK 294
C+ N G C +C+
Sbjct: 1120 CKENVFGPQCNECR 1133
Score = 92 (37.4 bits), Expect = 1.2e-09, Sum P(2) = 1.2e-09
Identities = 26/90 (28%), Positives = 33/90 (36%)
Query: 221 CECRHNTAGKDCEKCKPFF--SDRPWG--RATVYDANECKGGRCKCNGHASRCIKSPQGA 276
C C T G C+ C P + P G R C C CN H+ C P
Sbjct: 1362 CVCPPGTVGFSCQDCAPGYHRGKLPAGSDRGPRPLVAPCVP--CSCNNHSDTC--DPNTG 1417
Query: 277 LVCECRHNTAGKDCEKCKPFFSDRPWGRAT 306
C NTAG C+ C + + G A+
Sbjct: 1418 KCLNCGDNTAGDHCDVCTSGYYGKVTGSAS 1447
Score = 91 (37.1 bits), Expect = 1.5e-09, Sum P(2) = 1.5e-09
Identities = 23/86 (26%), Positives = 36/86 (41%)
Query: 211 CIKSPQGELVCE-CRHNTAGKDCEKCKPFFSDRPWGRATVYDANECKGGRCKCNGHASRC 269
C+ + C+ C GK CE+C + P T C+ +C CN H S
Sbjct: 1466 CVLEGDHDFRCDACLLGYEGKHCERCSSSYYGNP---QT--PGGSCQ--KCDCNPHGSVH 1518
Query: 270 IKSPQGALVCECRHNTAGKDCEKCKP 295
+ + C CR +G C++C+P
Sbjct: 1519 GDCDRTSGQCVCRLGASGLRCDECEP 1544
Score = 91 (37.1 bits), Expect = 1.5e-09, Sum P(2) = 1.5e-09
Identities = 31/102 (30%), Positives = 45/102 (44%)
Query: 205 NGHASRCIKSPQGELVCE-CRHNTAGKDCEKCKPFFSDRPWGRATVYDANECKGGRCKCN 263
N + C + E+VC+ C +G CE+C +D +G TV C C C+
Sbjct: 800 NNFSPTCHLNDGDEVVCDWCAPGYSGAWCERC----ADGYYGNPTV-PGESCVP--CDCS 852
Query: 264 GH-----ASRCIKSPQGALVCECRHNTAGKDCEKCKP-FFSD 299
G+ A C S G + +C NT G CE+C F+ D
Sbjct: 853 GNVDPSEAGHC-DSVTGECL-KCLGNTDGAHCERCADGFYGD 892
Score = 86 (35.3 bits), Expect = 5.0e-09, Sum P(2) = 5.0e-09
Identities = 27/109 (24%), Positives = 41/109 (37%)
Query: 202 CKCNGHASRCIKSPQGELVCECRHNTAGKDCEKCKPFFSDRPWGRATVYDANECKGGRCK 261
C+C+ S +C+C+ N G+ C++C + +G + + C C
Sbjct: 902 CECHVKGSHSAVCHLETGLCDCKPNVTGQQCDQCLHGY----YGLDSGHGCRPCN---CS 954
Query: 262 CNGHASR-CIKSPQGALVCECRHNTAGKDCEKCKPFFSDRPWGRATVYD 309
G S C Q C C AGK C++C F G T D
Sbjct: 955 VAGSVSDGCTDEGQ----CHCVPGVAGKRCDRCAHGFYAYQDGSCTPCD 999
Score = 67 (28.6 bits), Expect = 4.5e-07, Sum P(2) = 4.5e-07
Identities = 14/40 (35%), Positives = 22/40 (55%)
Query: 201 RCKCNGHAS---RCIKSPQGELVCECRHNTAGKDCEKCKP 237
+C CN H S C ++ G+ C CR +G C++C+P
Sbjct: 1508 KCDCNPHGSVHGDCDRT-SGQ--CVCRLGASGLRCDECEP 1544
Score = 44 (20.5 bits), Expect = 0.00010, Sum P(2) = 0.00010
Identities = 14/41 (34%), Positives = 17/41 (41%)
Query: 197 KQGGRCKCNGHAS--RCIKSPQGELVCECRHNTAGKDCEKC 235
+ G+C C AS RC + CE RH DC C
Sbjct: 1523 RTSGQCVCRLGASGLRCDE-------CEPRHILMETDCVSC 1556
>UNIPROTKB|F1P4C0 [details] [associations]
symbol:NTN4 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0005576 "extracellular region" evidence=IEA]
[GO:0016322 "neuron remodeling" evidence=IEA] [GO:0043237
"laminin-1 binding" evidence=IEA] [GO:0060668 "regulation of
branching involved in salivary gland morphogenesis by extracellular
matrix-epithelial cell signaling" evidence=IEA] InterPro:IPR001134
PROSITE:PS50189 InterPro:IPR002049 InterPro:IPR008993 Pfam:PF00053
SMART:SM00180 SUPFAM:SSF50242 PROSITE:PS01248 PROSITE:PS50027
GO:GO:0005604 InterPro:IPR018933 Pfam:PF01759 SMART:SM00643
InterPro:IPR008211 Pfam:PF00055 SMART:SM00136 PROSITE:PS51117
GeneTree:ENSGT00700000104042 OMA:RSQDFGK GO:GO:0060668
EMBL:AADN02005946 EMBL:AADN02005947 EMBL:AADN02005948
EMBL:AADN02005949 EMBL:AADN02005950 IPI:IPI00573187
Ensembl:ENSGALT00000018613 ArrayExpress:F1P4C0 Uniprot:F1P4C0
Length = 603
Score = 214 (80.4 bits), Expect = 3.3e-15, P = 3.3e-15
Identities = 49/124 (39%), Positives = 63/124 (50%)
Query: 200 GRCKCNGHASRCIK----SP---QG--ELV---CECRHNTAGKDCEKCKPFFSDRPWGRA 247
G C CNGHA C+ P G +V C C+HNTAG C+ C P ++DRPW A
Sbjct: 234 GSCFCNGHADHCVPVRGFRPVRAAGAFHVVHGKCMCKHNTAGPHCQHCAPLYNDRPWQAA 293
Query: 248 TVYDA--NECKGGRCKCNGHASRC--------IKSPQGALVCE-CRHNTAGKDCEKCKP- 295
EC+ CKCNGHA C + VC+ C+HNT G+ C++CKP
Sbjct: 294 DGKTGAPRECQS--CKCNGHADTCHFDMDAWLASGNRSGGVCDNCQHNTEGQHCQRCKPG 351
Query: 296 FFSD 299
F+ D
Sbjct: 352 FYRD 355
Score = 172 (65.6 bits), Expect = 3.6e-19, Sum P(2) = 3.6e-19
Identities = 74/264 (28%), Positives = 112/264 (42%)
Query: 32 GRP--RRCIPDFVNAAFGQEVKVNSVCGLESPERYC----DTSGACH--VCD--AGSPRG 81
G P + C P N A G+ ++ + CG + E +C D + C C +G+ G
Sbjct: 3 GSPCEKACNPRLGNLAHGRTLRTETACGSHAAEPFCAYAEDATLRCKPPTCGHCSGAHAG 62
Query: 82 -RFPAEYLTDLNNPSNV--TCWRSEAQTSVNSLSASPDNVTLTLSLGKKFELTYISLSFC 138
P + D +P + T W++ +P T+ L L F T++ L F
Sbjct: 63 LAHPPAAMAD--SPFRLPRTWWQAAGD--------APQE-TIQLDLEATFYFTHLILVF- 110
Query: 139 PKSIKPDSLAIYKSQDFGKSWQPLQFYSSQCKKLYGRTATGVISRGNEQEALCTDRHKKQ 198
KS +P ++ + +SQDFGK+WQ +++++ C +G V+ RG A CT R+
Sbjct: 111 -KSPRPAAMVLERSQDFGKTWQAYKYFATNCSATFG-LEDDVVRRG----APCTSRYSSP 164
Query: 199 ----GG----RCKCNGHASRCIKSP--QGEL-VCECRHNTAGKDCEKCKPFFSDR-PWGR 246
GG R HA++ S Q +L V R + C P P
Sbjct: 165 FPCTGGEVIYRALSPPHAAKDPYSTEAQAQLKVTNLRVRLLERQSCPCHPLEPPALPAPY 224
Query: 247 ATVYDANECKGGRCKCNGHASRCI 270
VYD KG C CNGHA C+
Sbjct: 225 YAVYDFI-VKGS-CFCNGHADHCV 246
Score = 139 (54.0 bits), Expect = 2.1e-06, P = 2.1e-06
Identities = 42/122 (34%), Positives = 55/122 (45%)
Query: 202 CKCNGHASRCIKSPQGEL--------VCE-CRHNTAGKDCEKCKP-FFSD--RPWGRATV 249
CKCNGHA C L VC+ C+HNT G+ C++CKP F+ D +P+
Sbjct: 306 CKCNGHADTCHFDMDAWLASGNRSGGVCDNCQHNTEGQHCQRCKPGFYRDLRKPFSAP-- 363
Query: 250 YDANECKGGRCKCNGHAS-----RCIKSPQGALVCECRHNTAGKDCEKCKPFFSDRPWGR 304
DA CK C G A+ R P C C+ AG C++C P + WG
Sbjct: 364 -DA--CKPCSCHPLGSAALPLGPRTFCDPSTG-DCPCKPGVAGPRCDRCLPGY----WGF 415
Query: 305 AT 306
T
Sbjct: 416 GT 417
Score = 127 (49.8 bits), Expect = 3.6e-19, Sum P(2) = 3.6e-19
Identities = 26/60 (43%), Positives = 31/60 (51%)
Query: 258 GRCKCNGHASRCIK----SP---QGAL-----VCECRHNTAGKDCEKCKPFFSDRPWGRA 305
G C CNGHA C+ P GA C C+HNTAG C+ C P ++DRPW A
Sbjct: 234 GSCFCNGHADHCVPVRGFRPVRAAGAFHVVHGKCMCKHNTAGPHCQHCAPLYNDRPWQAA 293
>RGD|1565947 [details] [associations]
symbol:Ntn4 "netrin 4" species:10116 "Rattus norvegicus"
[GO:0005576 "extracellular region" evidence=IEA] [GO:0005604
"basement membrane" evidence=ISO] [GO:0016322 "neuron remodeling"
evidence=ISO] [GO:0043237 "laminin-1 binding" evidence=ISO]
[GO:0060668 "regulation of branching involved in salivary gland
morphogenesis by extracellular matrix-epithelial cell signaling"
evidence=ISO] InterPro:IPR001134 PROSITE:PS50189 RGD:1565947
GO:GO:0016322 InterPro:IPR002049 InterPro:IPR008993 Pfam:PF00053
SMART:SM00180 SUPFAM:SSF50242 PROSITE:PS01248 PROSITE:PS50027
GO:GO:0005604 InterPro:IPR018933 Pfam:PF01759 SMART:SM00643
InterPro:IPR008211 Pfam:PF00055 PROSITE:PS51117
GeneTree:ENSGT00700000104042 GO:GO:0060668 IPI:IPI00359984
Ensembl:ENSRNOT00000007412 ArrayExpress:F1M4Q9 Uniprot:F1M4Q9
Length = 436
Score = 234 (87.4 bits), Expect = 4.2e-19, P = 4.2e-19
Identities = 55/140 (39%), Positives = 70/140 (50%)
Query: 200 GRCKCNGHASRC--------IKSPQGELV----CECRHNTAGKDCEKCKPFFSDRPWGRA 247
G C CNGHA +C +K+P V C C+HNTAG C+ C P ++DRPW A
Sbjct: 66 GSCFCNGHADQCLPVEGFRPVKAPGAFHVVHGKCMCKHNTAGSHCQHCAPLYNDRPWEAA 125
Query: 248 TVYDA--NECKGGRCKCNGHASRC-----IKSPQGAL---VCE-CRHNTAGKDCEKCKP- 295
NEC+ CKCNGHA C + G VC C+HNT G+ C++CKP
Sbjct: 126 DGRTGAPNECR--TCKCNGHADTCHFDINVWEASGNRSGGVCNNCQHNTEGQHCQRCKPG 183
Query: 296 FFSD--RPWGRATVYDANEC 313
F+ D RP+ A C
Sbjct: 184 FYRDLRRPFSAPDACKACSC 203
Score = 134 (52.2 bits), Expect = 4.7e-06, P = 4.7e-06
Identities = 34/104 (32%), Positives = 45/104 (43%)
Query: 202 CKCNGHASRC-----IKSPQGEL---VCE-CRHNTAGKDCEKCKP-FFSD--RPWGRATV 249
CKCNGHA C + G VC C+HNT G+ C++CKP F+ D RP+
Sbjct: 138 CKCNGHADTCHFDINVWEASGNRSGGVCNNCQHNTEGQHCQRCKPGFYRDLRRPFSAPDA 197
Query: 250 YDANECKGGRCKCNGHASRCIKSPQGALVCECRHNTAGKDCEKC 293
A C +S P C C+ AG C++C
Sbjct: 198 CKACSCHPVGSAILPFSSVTFCDPSNG-DCPCKPGVAGPHCDRC 240
>UNIPROTKB|F1MMT2 [details] [associations]
symbol:LAMA2 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0042383 "sarcolemma" evidence=IEA] [GO:0032224
"positive regulation of synaptic transmission, cholinergic"
evidence=IEA] [GO:0007411 "axon guidance" evidence=IEA] [GO:0045995
"regulation of embryonic development" evidence=IEA] [GO:0030334
"regulation of cell migration" evidence=IEA] [GO:0030155
"regulation of cell adhesion" evidence=IEA] [GO:0007155 "cell
adhesion" evidence=IEA] [GO:0005606 "laminin-1 complex"
evidence=IEA] [GO:0005102 "receptor binding" evidence=IEA]
InterPro:IPR009254 InterPro:IPR010307 Pfam:PF06008 Pfam:PF06009
GO:GO:0007411 GO:GO:0030155 GO:GO:0007155 GO:GO:0042383
Gene3D:2.60.120.200 InterPro:IPR008985 InterPro:IPR013320
SUPFAM:SSF49899 GO:GO:0030334 InterPro:IPR002049 InterPro:IPR001791
Pfam:PF00053 Pfam:PF00054 SMART:SM00180 SMART:SM00282
PROSITE:PS01248 PROSITE:PS50027 PROSITE:PS50025 Pfam:PF02210
GO:GO:0045995 GO:GO:0032224 GeneTree:ENSGT00700000104140
InterPro:IPR018031 InterPro:IPR000034 InterPro:IPR008211
Pfam:PF00052 Pfam:PF00055 SMART:SM00281 SMART:SM00136
PROSITE:PS51115 PROSITE:PS51117 GO:GO:0005606 OMA:NCNSFGS
EMBL:DAAA02026607 EMBL:DAAA02026593 EMBL:DAAA02026594
EMBL:DAAA02026595 EMBL:DAAA02026596 EMBL:DAAA02026597
EMBL:DAAA02026598 EMBL:DAAA02026599 EMBL:DAAA02026600
EMBL:DAAA02026601 EMBL:DAAA02026602 EMBL:DAAA02026603
EMBL:DAAA02026604 EMBL:DAAA02026605 EMBL:DAAA02026606
IPI:IPI00924129 Ensembl:ENSBTAT00000061257 Uniprot:F1MMT2
Length = 3085
Score = 190 (71.9 bits), Expect = 4.3e-19, Sum P(2) = 4.3e-19
Identities = 47/128 (36%), Positives = 56/128 (43%)
Query: 199 GGRCKCNGHASRCIKSP-QGELVCECRHNTAGKDCEKCKPFFSDRPWGRATVYDANECKG 257
GG C C GHA C P + CEC HNT G C++C P F +PW T +EC+
Sbjct: 247 GGMCICYGHARACPLDPVTNKSRCECEHNTCGDSCDQCCPGFHQKPWRAGTFLTKSECEA 306
Query: 258 GRCKCNGHASRCIKSPQ---------------GALVC-ECRHNTAGKDCEKC-KPFFSDR 300
C C+G A C G VC C NTAG +CE C FF R
Sbjct: 307 --CNCHGKAEECYYDENVARRNRSLNIHGKYIGGGVCINCTRNTAGINCETCIDGFF--R 362
Query: 301 PWGRATVY 308
P G + Y
Sbjct: 363 PKGVSPNY 370
Score = 144 (55.7 bits), Expect = 1.2e-13, Sum P(2) = 1.2e-13
Identities = 32/88 (36%), Positives = 42/88 (47%)
Query: 228 AGKDCEKCKPFFSDRPWGRATVYDANECKGGRCKCNGHASRCIKSP-QGALVCECRHNTA 286
A KD + P + R + +V D + GG C C GHA C P CEC HNT
Sbjct: 222 AHKDPREIDPIVTRRYY--YSVKDISV--GGMCICYGHARACPLDPVTNKSRCECEHNTC 277
Query: 287 GKDCEKCKPFFSDRPWGRATVYDANECK 314
G C++C P F +PW T +EC+
Sbjct: 278 GDSCDQCCPGFHQKPWRAGTFLTKSECE 305
Score = 133 (51.9 bits), Expect = 2.1e-12, Sum P(2) = 2.1e-12
Identities = 28/85 (32%), Positives = 42/85 (49%)
Query: 214 SPQGELV--CECRHNTAGKDCEKCKPFF---SDRPWGRATVYDANECKGGRCKCNGHASR 268
+P L+ C+C +G CE C P F P GR C C+C+GH++
Sbjct: 1334 TPPAHLIEKCDCPPGYSGLSCETCTPGFYRLRSEPGGRTPGATLGTCVP--CQCHGHSNL 1391
Query: 269 CIKSPQGALVCECRHNTAGKDCEKC 293
C P+ ++ C+H+TAG CE+C
Sbjct: 1392 C--DPETSICQNCQHHTAGDFCERC 1414
Score = 127 (49.8 bits), Expect = 9.8e-12, Sum P(2) = 9.8e-12
Identities = 37/131 (28%), Positives = 59/131 (45%)
Query: 184 GNEQEALCTDRHKKQGGR--------CKCNGHASRCIKSPQGELVCECRHNTAGKDCEKC 235
G+ E+ C RH++ G C+C GHA C GE + C+ +T G C+KC
Sbjct: 695 GSSCES-CWPRHRRVNGTIFGGLCEPCQCFGHAESC-DDTTGECL-NCKDHTDGPYCDKC 751
Query: 236 KPFFSDRPWGRATVYDANECKGGRCKCNGHASR----CIKSPQGALVC-ECRHNTAGKDC 290
P F +G T +++C+ C N ++ C L+C EC +G+ C
Sbjct: 752 LPGF----YGDPTKGTSDDCQPCACPLNSPSNNFSPTCHMDRSLGLICDECPVGYSGQRC 807
Query: 291 EKCKPFFSDRP 301
E+C + +P
Sbjct: 808 ERCAEGYFGQP 818
Score = 125 (49.1 bits), Expect = 1.6e-11, Sum P(2) = 1.6e-11
Identities = 32/97 (32%), Positives = 44/97 (45%)
Query: 202 CKCNGHASRCIKSPQGELV--CE-CRHNTAGKDCEKCKPFFSDRPWGRATVYDANECKGG 258
C+CN + I L C C+ T G+ CE C +D +G A DA C+
Sbjct: 828 CQCNDNLDFSIPGSCDSLSGSCLICKPGTTGRYCELC----ADGYFGDAV--DAKNCQPC 881
Query: 259 RCKCNGHASRCIKSPQGALVCECRHNTAGKDCEKCKP 295
C NG S + G CEC+ N G+ C++CKP
Sbjct: 882 HCNANGSFSEVCHAQTGQ--CECKPNVQGRRCDECKP 916
Score = 122 (48.0 bits), Expect = 4.3e-19, Sum P(2) = 4.3e-19
Identities = 46/174 (26%), Positives = 71/174 (40%)
Query: 39 PDFVNAAFGQEVKVNSVCGLESPERYCDT----------SGACHVCDAGS--PRGRFPAE 86
P +N A + N+ CG + PE YC + C +C+ S P R P
Sbjct: 4 PAVLNLASSALITTNATCGEKGPEMYCKLVEHVPGQPVRNPQCRICNQNSSNPYQRHPIT 63
Query: 87 YLTDLNNPSNVTCWRSEAQTSVNSLSASPDNVTLTLSLGKKFELTYISLSFCPKSIKPDS 146
D N T W+S S+ + VT+TL L + F++ Y+ + S +P +
Sbjct: 64 NAIDGKN----TWWQSP---SIKN-GIEYHYVTITLDLQQVFQIAYVIVK-AANSPRPGN 114
Query: 147 LAIYKSQD--FGKSWQPLQFYSSQCKKLYG-RTATGVISRGNEQEALCTDRHKK 197
+ +S D K WQ ++C LY TG S + E +CT + K
Sbjct: 115 WILERSLDNVVYKPWQYHAVTDTECLTLYNIYPRTGPPSYAKDDEVICTSFYSK 168
Score = 122 (48.0 bits), Expect = 3.6e-11, Sum P(2) = 3.6e-11
Identities = 31/107 (28%), Positives = 48/107 (44%)
Query: 202 CKCNGHASRCIKSPQGELVCECRHNTAGKDCEKCKPFFSDRPWGRATVYDANECKGGRCK 261
C+C+GH++ C P+ + C+H+TAG CE+C + G N+C+ +C
Sbjct: 1383 CQCHGHSNLC--DPETSICQNCQHHTAGDFCERCALGYYGIVKGLP-----NDCQ--QCA 1433
Query: 262 C------NGHASRCIKSPQGALVCE-CRHNTAGKDCEKCKPFFSDRP 301
C N + CI C C GK CE+C P ++ P
Sbjct: 1434 CPLISSSNNFSPSCIMEGLDDYRCTACPRGYEGKYCERCAPGYAGSP 1480
Score = 112 (44.5 bits), Expect = 3.8e-10, Sum P(2) = 3.8e-10
Identities = 37/136 (27%), Positives = 54/136 (39%)
Query: 187 QEALCTDRHKKQGGRC-KCNGHASRCIKSPQGELVCECRH-NTAGKDCEK-----CKPFF 239
Q C + QG RC +C ++S +G + C C + DCE+ C+P
Sbjct: 896 QTGQCECKPNVQGRRCDECKPETFG-LQSARGCIPCNCNSFGSKSFDCEESGQCWCQPGV 954
Query: 240 SDRPWGRATVYDANECKGG--RCKCNGHASRCIKSPQGALVCECRHNTAGKDCEKCKPFF 297
+ + R N +GG C C+ + C P+ C C NT G+ C KC P
Sbjct: 955 TGKKCDRCAHGYFNFQEGGCTACDCSHLGNNC--DPKTGR-CICPPNTIGEKCSKCAP-- 1009
Query: 298 SDRPWGRATVYDANEC 313
R WG + C
Sbjct: 1010 --RTWGHSITTGCKAC 1023
Score = 110 (43.8 bits), Expect = 6.2e-10, Sum P(2) = 6.2e-10
Identities = 31/94 (32%), Positives = 41/94 (43%)
Query: 220 VCECRHNTAGKDCEKCKPFFSDRPWGRATVYDANECKGGRCKCNGHASRCIKSPQGALVC 279
VC+C G CE C P R G T++ C+ C+C GHA C + L
Sbjct: 686 VCQCPPGYTGSSCESCWPRHR-RVNG--TIF-GGLCEP--CQCFGHAESCDDTTGECL-- 737
Query: 280 ECRHNTAGKDCEKCKPFFSDRPWGRATVYDANEC 313
C+ +T G C+KC P F P + T D C
Sbjct: 738 NCKDHTDGPYCDKCLPGFYGDPT-KGTSDDCQPC 770
Score = 102 (41.0 bits), Expect = 4.1e-09, Sum P(2) = 4.1e-09
Identities = 27/110 (24%), Positives = 42/110 (38%)
Query: 205 NGHASRCIKSPQGELVCE-CRHNTAGKDCEKCKPFFSDRPWGRATVYDANECKGGRCKCN 263
N + CI + C C GK CE+C P ++ P C+ C+C+
Sbjct: 1441 NNFSPSCIMEGLDDYRCTACPRGYEGKYCERCAPGYAGSPSS-----PGGSCQ--ECECD 1493
Query: 264 GHASRCIKSPQGALVCECRHNTAGKDCEKCKPFFSDRPWGRATVYDANEC 313
H S + +C CR G C+ C+ + G V+ +EC
Sbjct: 1494 PHGSLPVPCDPVMGICTCRPGATGPKCDGCEQGHARE--GMECVFCGDEC 1541
Score = 87 (35.7 bits), Expect = 1.4e-07, Sum P(2) = 1.4e-07
Identities = 31/118 (26%), Positives = 45/118 (38%)
Query: 193 DRHKKQGGRCKCNGHASRCIKSPQGELVCECRHNTAGKDCEKCKPFFSDRPWGRATV-YD 251
D Q C NG S + G+ CEC+ N G+ C++CKP R + +
Sbjct: 874 DAKNCQPCHCNANGSFSEVCHAQTGQ--CECKPNVQGRRCDECKPETFGLQSARGCIPCN 931
Query: 252 AN-------ECK-GGRCKCN-G----HASRCIKS-----PQGALVCECRHNTAGKDCE 291
N +C+ G+C C G RC G C+C H G +C+
Sbjct: 932 CNSFGSKSFDCEESGQCWCQPGVTGKKCDRCAHGYFNFQEGGCTACDCSH--LGNNCD 987
Score = 84 (34.6 bits), Expect = 2.9e-07, Sum P(2) = 2.9e-07
Identities = 23/79 (29%), Positives = 32/79 (40%)
Query: 221 CECRHNTAGKDCEKCKPFFSDRPWGRATVYDANECKGGRCKCNGHASRCIKSPQGALVCE 280
C C+ G C++C + P +CK C C+G S G C
Sbjct: 405 CHCKPGFRGVSCDRCARGYIGYP----------DCKP--CNCSGAGSTNEDPCFGP--CN 450
Query: 281 CRHNTAGKDCEKCK-PFFS 298
C+ N G DC +CK FF+
Sbjct: 451 CKENVEGGDCSRCKFGFFN 469
Score = 81 (33.6 bits), Expect = 8.5e-08, Sum P(3) = 8.5e-08
Identities = 23/72 (31%), Positives = 32/72 (44%)
Query: 202 CKCNGHASRCIKSPQGELVCECRHNTAGKDCEKCKPFFSDRPWGRATVYDANECKG-GRC 260
C C+G S G C C+ N G DC +CK +G + + N KG C
Sbjct: 432 CNCSGAGSTNEDPCFGP--CNCKENVEGGDCSRCK-------FGFFNLQEDNH-KGCDEC 481
Query: 261 KCNGHASRCIKS 272
C+G ++RC S
Sbjct: 482 FCSGVSNRCQSS 493
Score = 79 (32.9 bits), Expect = 9.6e-07, Sum P(2) = 9.6e-07
Identities = 28/80 (35%), Positives = 34/80 (42%)
Query: 220 VC-ECRHNTAGKDCEKCKPFFSDRPWGRATVYDANECKGGRCKCNGHASR-CIKSPQGAL 277
VC C NTAG +CE C F RP G + Y C+ C G + C+K + A
Sbjct: 340 VCINCTRNTAGINCETCIDGFF-RPKGVSPNYP-RPCQPCHCDPVGSLNEVCVKDEKHA- 396
Query: 278 VCECRHNTAGKDCEKCKPFF 297
R A C CKP F
Sbjct: 397 ----RRGLAPGSCH-CKPGF 411
Score = 71 (30.1 bits), Expect = 6.3e-06, Sum P(2) = 6.3e-06
Identities = 15/56 (26%), Positives = 24/56 (42%)
Query: 202 CKCNGHASRCIKSPQGELVCECRHNTAGKDCEKCKPFFSDRPWGRATVYDANECKG 257
C+C+ H S + +C CR G C+ C+ + G V+ +EC G
Sbjct: 1490 CECDPHGSLPVPCDPVMGICTCRPGATGPKCDGCEQGHARE--GMECVFCGDECTG 1543
Score = 69 (29.3 bits), Expect = 1.0e-05, Sum P(2) = 1.0e-05
Identities = 20/94 (21%), Positives = 33/94 (35%)
Query: 202 CKCNGHASRCIKSPQGELVCECRHNTAGKDCEKCKPFFSDRPWGRATVYDANECKGGRCK 261
C C+ S + C+C +G C +C + P + D
Sbjct: 1023 CNCSSVGSLDFQCDLNMGQCKCHPKFSGAKCTECTRGHWNYP--HCSPCDCFLSGTDDST 1080
Query: 262 CNGHASRCIKSPQGALVCECRHNTAGKDCEKCKP 295
C+ +C Q C C+ N G C++C+P
Sbjct: 1081 CDLETKKCSCIDQTGQ-CTCKVNVEGIHCDRCRP 1113
Score = 53 (23.7 bits), Expect = 8.5e-08, Sum P(3) = 8.5e-08
Identities = 13/38 (34%), Positives = 17/38 (44%)
Query: 272 SPQGALV--CECRHNTAGKDCEKCKPFF---SDRPWGR 304
+P L+ C+C +G CE C P F P GR
Sbjct: 1334 TPPAHLIEKCDCPPGYSGLSCETCTPGFYRLRSEPGGR 1371
Score = 45 (20.9 bits), Expect = 0.00017, Sum P(2) = 0.00017
Identities = 9/20 (45%), Positives = 14/20 (70%)
Query: 65 CDT-SGACHVCDAGSPRGRF 83
CD+ SG+C +C G+ GR+
Sbjct: 842 CDSLSGSCLICKPGTT-GRY 860
>UNIPROTKB|F1S0U7 [details] [associations]
symbol:NTNG2 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0046658 "anchored to plasma membrane" evidence=IEA]
[GO:0007409 "axonogenesis" evidence=IEA] InterPro:IPR000742
PROSITE:PS50026 SMART:SM00181 InterPro:IPR013032 PROSITE:PS00022
GO:GO:0007409 PROSITE:PS01186 InterPro:IPR002049 Pfam:PF00053
SMART:SM00180 PROSITE:PS01248 PROSITE:PS50027 GO:GO:0046658
InterPro:IPR013111 Pfam:PF07974 InterPro:IPR008211 Pfam:PF00055
SMART:SM00136 PROSITE:PS51117 GeneTree:ENSGT00700000104042
OMA:QPRCDPA EMBL:CU550727 ProteinModelPortal:F1S0U7
Ensembl:ENSSSCT00000006293 Uniprot:F1S0U7
Length = 532
Score = 149 (57.5 bits), Expect = 7.1e-19, Sum P(2) = 7.1e-19
Identities = 29/51 (56%), Positives = 32/51 (62%)
Query: 258 GRCKCNGHASRCIKSPQGALVCECRHNTAGKDCEKCKPFFSDRPWGRATVY 308
GRCKCN HA+ C +G+L CEC HNT G DC KCK F R W RA Y
Sbjct: 222 GRCKCNLHANLC-SVREGSLQCECDHNTTGPDCGKCKRSFRTRSW-RAGSY 270
Score = 149 (57.5 bits), Expect = 7.1e-19, Sum P(2) = 7.1e-19
Identities = 40/133 (30%), Positives = 61/133 (45%)
Query: 74 CDAGSPRGRFPAEYLTDLNNPSNVTCWRSEAQTSVNSLSASPDNVTLTLSLGKKFELTY- 132
CDA +P P + D + T W+S S SP +TLS K ELT
Sbjct: 18 CDASNPDLAHPPRLMFDREDEGLATYWQSVTW----SRYPSPLEANITLSWNKSVELTDD 73
Query: 133 ISLSFCPKSIKPDSLAIYKSQDFGKSWQPLQFYSSQCKKLYGRTATGV--ISRGNEQEAL 190
+ ++F + +P + + KS D G++WQP QFY+ C + +G A +S L
Sbjct: 74 VVVTF--EYGRPTVMVLEKSLDNGRTWQPYQFYAEDCMEAFGMPARRARDLSASGAHRVL 131
Query: 191 CTDRHKKQGGRCK 203
CT+ + + G K
Sbjct: 132 CTEEYSRWAGSKK 144
Score = 148 (57.2 bits), Expect = 9.0e-19, Sum P(2) = 9.0e-19
Identities = 29/51 (56%), Positives = 31/51 (60%)
Query: 200 GRCKCNGHASRCIKSPQGELVCECRHNTAGKDCEKCKPFFSDRPWGRATVY 250
GRCKCN HA+ C +G L CEC HNT G DC KCK F R W RA Y
Sbjct: 222 GRCKCNLHANLC-SVREGSLQCECDHNTTGPDCGKCKRSFRTRSW-RAGSY 270
Score = 145 (56.1 bits), Expect = 1.9e-18, Sum P(2) = 1.9e-18
Identities = 37/102 (36%), Positives = 50/102 (49%)
Query: 199 GGRCKCNGHASRCIKSPQGELV-C-ECRHNTAGKDCEKCKPFFSDRPWGRATVYDANECK 256
G C+C GH++RC +V C C+HNT G+ C+ C+ + G A + D N C
Sbjct: 352 GPDCECYGHSNRCSYIDFLNVVTCVSCKHNTRGQHCQHCRLGYYRN--GSAELDDENVCI 409
Query: 257 GGRCKCNGHAS---RCIKSPQGALVCECRHNTAGKDCEKCKP 295
C CN S RC ++ G CECR AG C+ C P
Sbjct: 410 --ECNCNQIGSVHDRCNET--G--FCECREGAAGPKCDDCLP 445
>WB|WBGene00001328 [details] [associations]
symbol:epi-1 species:6239 "Caenorhabditis elegans"
[GO:0005604 "basement membrane" evidence=IEA;IDA] [GO:0007155 "cell
adhesion" evidence=IEA] [GO:0010171 "body morphogenesis"
evidence=IMP] [GO:0040011 "locomotion" evidence=IMP] [GO:0000003
"reproduction" evidence=IMP] [GO:0040027 "negative regulation of
vulval development" evidence=IMP] [GO:0040007 "growth"
evidence=IMP] [GO:0002119 "nematode larval development"
evidence=IMP] [GO:0009790 "embryo development" evidence=IMP]
[GO:0006898 "receptor-mediated endocytosis" evidence=IMP]
[GO:0002009 "morphogenesis of an epithelium" evidence=IMP]
[GO:0040035 "hermaphrodite genitalia development" evidence=IMP]
[GO:0009792 "embryo development ending in birth or egg hatching"
evidence=IMP] [GO:0006915 "apoptotic process" evidence=IMP]
[GO:0016477 "cell migration" evidence=IMP] [GO:0007414 "axonal
defasciculation" evidence=IMP] [GO:0042127 "regulation of cell
proliferation" evidence=IMP] [GO:0001764 "neuron migration"
evidence=IMP] [GO:0071711 "basement membrane organization"
evidence=IMP] [GO:0040017 "positive regulation of locomotion"
evidence=IMP] [GO:0009408 "response to heat" evidence=IMP]
[GO:0010950 "positive regulation of endopeptidase activity"
evidence=IMP] [GO:0051788 "response to misfolded protein"
evidence=IMP] InterPro:IPR010307 Pfam:PF06009 GO:GO:0009792
GO:GO:0002009 GO:GO:0006898 GO:GO:0040007 GO:GO:0006915
GO:GO:0001764 GO:GO:0002119 GO:GO:0010171 GO:GO:0040017
GO:GO:0007155 GO:GO:0009408 InterPro:IPR013032 PROSITE:PS00022
GO:GO:0042127 Gene3D:2.60.120.200 InterPro:IPR008985
InterPro:IPR013320 SUPFAM:SSF49899 GO:GO:0040035 InterPro:IPR002049
InterPro:IPR001791 Pfam:PF00053 SMART:SM00180 SMART:SM00282
PROSITE:PS01248 PROSITE:PS50027 PROSITE:PS50025 GO:GO:0010950
GO:GO:0005604 GO:GO:0071711 GO:GO:0040027 Pfam:PF02210
GO:GO:0051788 EMBL:Z70286 UniGene:Cel.18380 GeneID:177956
KEGG:cel:CELE_K08C7.3 CTD:177956 GeneTree:ENSGT00700000104140
NextBio:899114 GO:GO:0007414 InterPro:IPR018031 InterPro:IPR000034
InterPro:IPR008211 Pfam:PF00052 Pfam:PF00055 SMART:SM00281
SMART:SM00136 PROSITE:PS51115 PROSITE:PS51117 EMBL:AB001074
EMBL:AB016806 PIR:T37316 RefSeq:NP_001023281.1 HSSP:Q92956
ProteinModelPortal:G5EEV6 SMR:G5EEV6 PRIDE:G5EEV6
EnsemblMetazoa:K08C7.3a.1 EnsemblMetazoa:K08C7.3a.2
WormBase:K08C7.3a OMA:CHHALLD Uniprot:G5EEV6
Length = 3704
Score = 207 (77.9 bits), Expect = 9.4e-19, Sum P(2) = 9.4e-19
Identities = 53/135 (39%), Positives = 65/135 (48%)
Query: 199 GGRCKCNGHASRC-IKSPQG--ELVCECRHNTAGKDCEKCKPFFSDRPWGRATVYDANEC 255
GGRC CNGHA C I PQ L+C C HNT G CE+C P F + W AT ++ C
Sbjct: 295 GGRCVCNGHAVTCDILEPQRPKSLLCRCEHNTCGDMCERCCPGFVQKQWQAATAHNNFTC 354
Query: 256 KGGRCKCNGHASRC------------IKSP---QGALVCE-CRHNTAGKDCEKCKPFFSD 299
+ C C G ++ C I S +G VC+ CR NT G +C KC F
Sbjct: 355 EA--CNCFGRSNECEYDAEVDLNKQSIDSQGNYEGGGVCKNCRENTEGVNCNKCS-FGYF 411
Query: 300 RPWGRATVYDANECK 314
RP G T + CK
Sbjct: 412 RPEG-VTWNEPQPCK 425
Score = 151 (58.2 bits), Expect = 6.7e-12, Sum P(2) = 6.7e-12
Identities = 34/104 (32%), Positives = 47/104 (45%)
Query: 202 CKCNGHASRCIKSPQGELVCECRHNTAGKDCEKCKPFFSDRPWGRAT---VYDANECKGG 258
C+CNGH++ C P + +C HNT G CE C ++ +G AT YD C
Sbjct: 1830 CECNGHSATC--DPDTGICTDCEHNTNGDHCEFC----NEGHYGNATNGSPYDCMACACP 1883
Query: 259 RCKCNGHASRCIKSPQGALV-CECRHNTAGKDCEKCKPFFSDRP 301
N A C S +G L+ C C+ G C++C F P
Sbjct: 1884 FAPTNNFAKSCDVSEEGQLLQCNCKPGYTGDRCDRCASGFFGHP 1927
Score = 132 (51.5 bits), Expect = 9.5e-10, Sum P(2) = 9.5e-10
Identities = 36/116 (31%), Positives = 50/116 (43%)
Query: 202 CKCNGHA----SRCIKSPQGELVCECRHNTAGKDCEKCKPFFSDRPWGRATVYDANECKG 257
C+CNG+ SR G+ C NT G+ CE C +F +G A A C
Sbjct: 1937 CQCNGNNNLTDSRSCHPNSGDCYL-CEQNTDGRHCESCAAWF----YGDAVT--AKNCSS 1989
Query: 258 GRCKCNGHASRCIKSPQGALVCECRHNTAGKDCEKCKPFFSDRPWGRATVYDANEC 313
C+C+ S+ + G CEC+ N G C++CKP D WG + C
Sbjct: 1990 --CECSQCGSQYCDNKSGG--CECKINVEGDSCDRCKP---DH-WGFSKCQGCQGC 2037
Score = 124 (48.7 bits), Expect = 7.3e-09, Sum P(2) = 7.3e-09
Identities = 34/105 (32%), Positives = 49/105 (46%)
Query: 202 CKCN-GHASR----CIKSPQGELVCECRHNTAGKDCEKCKPFFSDRPWGRATVYDANECK 256
C CN +R C K GEL C CR + G+ C++CKP F D + + + C+
Sbjct: 701 CNCNPSGVTRDFQGCDKVSPGEL-CSCRKHVTGRICDQCKPTFWDLQY-----HHEDGCR 754
Query: 257 GGRCKCNGHAS---RC-IKSPQGALVCECRHNTAGKDCEKCKPFF 297
C NG S C +K+ Q C C+ N G+ C++C F
Sbjct: 755 SCDCNVNGTISGLNTCDLKTGQ----CMCKKNADGRRCDQCADGF 795
Score = 123 (48.4 bits), Expect = 9.5e-09, Sum P(2) = 9.5e-09
Identities = 31/87 (35%), Positives = 41/87 (47%)
Query: 216 QGELVCE-CRHNTAGKDCEKCKPFFSDRPWGRATVYDANECKGGRCKCNGHASRCIKSPQ 274
+G VC+ CR NT G +C KC F RP G T + CK C + H C +
Sbjct: 386 EGGGVCKNCRENTEGVNCNKCS-FGYFRPEG-VTWNEPQPCKVCDCDPDKHTGACAEET- 442
Query: 275 GALVCECRHNTAGKDCEKCKPFFSDRP 301
G CEC G+DC++C + D P
Sbjct: 443 GK--CECLPRFVGEDCDQCASGYYDAP 467
Score = 117 (46.2 bits), Expect = 4.4e-08, Sum P(2) = 4.4e-08
Identities = 31/102 (30%), Positives = 44/102 (43%)
Query: 198 QGGRCKCNGHASRCIKSPQGELVCECRHNTAGKDCEKCKPFFSDRPWGRATVYDANECKG 257
+G C +G + S G+ C C+ N G+ C++CKP F + P EC
Sbjct: 654 RGCECLLSGAKGQTCDS-NGQ--CYCKGNFEGERCDRCKPNFYNFPI-------CEECNC 703
Query: 258 GRCKCNGHASRCIKSPQGALVCECRHNTAGKDCEKCKPFFSD 299
C K G L C CR + G+ C++CKP F D
Sbjct: 704 NPSGVTRDFQGCDKVSPGEL-CSCRKHVTGRICDQCKPTFWD 744
Score = 116 (45.9 bits), Expect = 5.6e-08, Sum P(2) = 5.6e-08
Identities = 31/103 (30%), Positives = 46/103 (44%)
Query: 202 CKCNGHASRCIKSPQGELV---CECRHNTAGKDCEKCKPFFSDRPWGRATVYDANECKGG 258
C C+G I SP+ + C C N G+ C+KC F + P +C+G
Sbjct: 610 CACDGAG---ITSPECDATSGQCPCNGNFTGRTCDKCAAGFYNYP----------DCRGC 656
Query: 259 RCKCNGHASRCIKSPQGALVCECRHNTAGKDCEKCKPFFSDRP 301
C +G + S G C C+ N G+ C++CKP F + P
Sbjct: 657 ECLLSGAKGQTCDS-NGQ--CYCKGNFEGERCDRCKPNFYNFP 696
Score = 108 (43.1 bits), Expect = 4.3e-07, Sum P(2) = 4.3e-07
Identities = 34/117 (29%), Positives = 50/117 (42%)
Query: 205 NGHASRCIKSPQGELV-CECRHNTAGKDCEKCKPFFSDRPWGRATVYDANECKGGRCKCN 263
N A C S +G+L+ C C+ G C++C F P C C+CN
Sbjct: 1888 NNFAKSCDVSEEGQLLQCNCKPGYTGDRCDRCASGFFGHPQ-----ISGESCSP--CQCN 1940
Query: 264 GHA----SR-CIKSPQGALVCECRHNTAGKDCEKCKPFFSDRPWGRA-TVYDANECK 314
G+ SR C + +CE NT G+ CE C +F +G A T + + C+
Sbjct: 1941 GNNNLTDSRSCHPNSGDCYLCE--QNTDGRHCESCAAWF----YGDAVTAKNCSSCE 1991
Score = 104 (41.7 bits), Expect = 1.2e-06, Sum P(2) = 1.2e-06
Identities = 34/112 (30%), Positives = 46/112 (41%)
Query: 205 NGHASRCIKSPQGELVCECRHNTAGKDCEKCKPFFSDRPWGRATVYDANECKGGRCKCNG 264
NG S IK+ E C+C G C+ C + G C C+CNG
Sbjct: 1783 NGVDS-VIKASSVEQ-CQCPAPYTGPSCQLCASGYHRVQSGSFL----GACVP--CECNG 1834
Query: 265 HASRCIKSPQGALVCECRHNTAGKDCEKCKPFFSDRPWGRAT---VYDANEC 313
H++ C P + +C HNT G CE C ++ +G AT YD C
Sbjct: 1835 HSATC--DPDTGICTDCEHNTNGDHCEFC----NEGHYGNATNGSPYDCMAC 1880
Score = 99 (39.9 bits), Expect = 9.4e-19, Sum P(2) = 9.4e-19
Identities = 34/127 (26%), Positives = 58/127 (45%)
Query: 71 CHVCDAGSPRGRFPAEYLTDLNNPSNVTCWRSEAQTSVNSLSASPDNVTLTLSLGKKFEL 130
C C+AG+ PA + D NN + W S S + V +T+ L ++F +
Sbjct: 101 CGHCNAGNENSH-PAANMVDGNN----SWWMSPPL----SRGLQHNEVNITIDLEQEFHV 151
Query: 131 TYISLSFCPKSIKPDSLAIYKSQDFGKSWQP-LQFY--SSQCKKLYGRTATGVISRGNEQ 187
Y+ + S +P S + +S D GK++QP F +++C + +G + IS +
Sbjct: 152 AYVWIQMA-NSPRPGSWVLERSTDHGKTYQPWFNFAENAAECMRRFGMESLSPISE--DD 208
Query: 188 EALC-TD 193
C TD
Sbjct: 209 SVTCRTD 215
Score = 96 (38.9 bits), Expect = 8.4e-06, Sum P(2) = 8.4e-06
Identities = 27/94 (28%), Positives = 36/94 (38%)
Query: 202 CKCNG--HASRCIKSPQGELVCECRHNTAGKDCEKCKPFFSDRPWGRATVYDANECKGGR 259
C C+ H C + G+ CEC G+DC++C + YDA +CK
Sbjct: 427 CDCDPDKHTGACAEET-GK--CECLPRFVGEDCDQCASGY----------YDAPKCKPCE 473
Query: 260 CKCNGHASRCIKSPQGALVCECRHNTAGKDCEKC 293
C NG G C C+ G CE C
Sbjct: 474 CNVNGTIGDVCLPEDGQ--CPCKAGFGGTFCETC 505
Score = 92 (37.4 bits), Expect = 2.1e-05, Sum P(2) = 2.1e-05
Identities = 25/98 (25%), Positives = 40/98 (40%)
Query: 202 CKCNGHASRCIKSPQGELVCECRHNTAGKDCEKCKPFFSDRPWGRATVYDANECKGGRCK 261
C C S + Q C+C+ G+ CE+C P + + P + +C G+ +
Sbjct: 1415 CDCVAQGSESFQCEQYGGQCKCKPGVIGRRCERCAPGYYNFP---ECI--KCQCNAGQ-Q 1468
Query: 262 CNGHASRCIKSP--QGALVCECRHNTAGKD----CEKC 293
C+ +C P +G C N G D C+KC
Sbjct: 1469 CDERTGQCFCPPHVEGQTCDRCVSNAFGYDPLIGCQKC 1506
Score = 87 (35.7 bits), Expect = 7.0e-05, Sum P(2) = 7.0e-05
Identities = 28/99 (28%), Positives = 40/99 (40%)
Query: 201 RCKCNGHASR---CIKSPQ-GELVCECRHNTAGKDCEKCKPFFSDRPWGRATVYDANECK 256
+C C+ S + P+ G+ C CR + G+ C++C F Y C
Sbjct: 1505 KCGCHPQGSEGGNLVCDPESGQ--CLCRESMGGRQCDRCLAGF----------YGFPHCY 1552
Query: 257 GGRCKCN-GHASRCIKSPQGALVCECRHNTAGKDCEKCK 294
G C CN + I A C+C+ N G CE CK
Sbjct: 1553 G--CSCNRAGTTEEICDATNAQ-CKCKENVYGGRCEACK 1588
Score = 86 (35.3 bits), Expect = 8.8e-05, Sum P(2) = 8.8e-05
Identities = 25/100 (25%), Positives = 36/100 (36%)
Query: 202 CKCNGHASRCIKSPQGELVCECRHNTAGKDCEKCKPFFSDRPWGRATVYDANECKGGRCK 261
C C+ + Q C C+ AG C++C F P CK C
Sbjct: 564 CNCDPMGTEGGVCDQTTGQCLCKEGFAGDKCDRCDIAFYGYP----------NCKA--CA 611
Query: 262 CNGHASRCIKSPQGALVCECRHNTAGKDCEKCKPFFSDRP 301
C+G + + C C N G+ C+KC F + P
Sbjct: 612 CDGAGITSPECDATSGQCPCNGNFTGRTCDKCAAGFYNYP 651
Score = 83 (34.3 bits), Expect = 0.00018, Sum P(2) = 0.00018
Identities = 32/107 (29%), Positives = 45/107 (42%)
Query: 195 HKKQGGR-CKCN--GHAS---RC-IKSPQGELVCECRHNTAGKDCEKCKPFFSDRPWGRA 247
H + G R C CN G S C +K+ Q C C+ N G+ C++C F R
Sbjct: 748 HHEDGCRSCDCNVNGTISGLNTCDLKTGQ----CMCKKNADGRRCDQCADGFY-----RL 798
Query: 248 TVYDANECKGGRCKCNGHA-SRC-IKSPQGALVCECRHNTAGKDCEK 292
Y+ C+ C G + C I S Q C+CR G C++
Sbjct: 799 NSYNQMGCESCHCDIGGALRAECDITSGQ----CKCRPRVTGLRCDQ 841
Score = 82 (33.9 bits), Expect = 0.00022, Sum P(2) = 0.00022
Identities = 31/111 (27%), Positives = 44/111 (39%)
Query: 202 CKCNGHASR---CIKSPQGELVCECRHNTAGKDCEKCKPFFSDRPWGRATVYDANECKGG 258
C C+ S C S G+ CEC+ AG C+KC+ G Y ++CK
Sbjct: 519 CVCDATGSEHGNCSAST-GQ--CECKPAYAGLSCDKCQV-------G----YFGDDCKF- 563
Query: 259 RCKCNGHASRCIKSPQGALVCECRHNTAGKDCEKCKPFFSDRPWGRATVYD 309
C C+ + Q C C+ AG C++C F P +A D
Sbjct: 564 -CNCDPMGTEGGVCDQTTGQCLCKEGFAGDKCDRCDIAFYGYPNCKACACD 613
Score = 79 (32.9 bits), Expect = 0.00045, Sum P(2) = 0.00045
Identities = 29/109 (26%), Positives = 41/109 (37%)
Query: 193 DRHKKQGGRCKCNGHASRCIKSPQGELVCECRHNTAGKDCEKCKPFFSDRPWGRAT-VYD 251
D K + C NG G+ C C+ G CE C +++ G V D
Sbjct: 465 DAPKCKPCECNVNGTIGDVCLPEDGQ--CPCKAGFGGTFCETCADGYTNVTAGCVECVCD 522
Query: 252 ANECKGGRCKCNGHASRCIKSPQGALVCECRHNTAGKDCEKCKP-FFSD 299
A + G C + G CEC+ AG C+KC+ +F D
Sbjct: 523 ATGSEHGNCSAS----------TGQ--CECKPAYAGLSCDKCQVGYFGD 559
Score = 78 (32.5 bits), Expect = 0.00057, Sum P(2) = 0.00057
Identities = 19/84 (22%), Positives = 32/84 (38%)
Query: 218 ELVCECRHNTAGKDCEKCKPFFSDRPWGRATVYDANECKGGRCKCNGHASRCIKSPQGAL 277
E + EC + E F + + T ++A C C S + Q
Sbjct: 1376 EFLKECSEDNLKNHPESVSDFCKQKIFSLTTDFNAAALS---CDCVAQGSESFQCEQYGG 1432
Query: 278 VCECRHNTAGKDCEKCKPFFSDRP 301
C+C+ G+ CE+C P + + P
Sbjct: 1433 QCKCKPGVIGRRCERCAPGYYNFP 1456
Score = 59 (25.8 bits), Expect = 9.0e-08, Sum P(2) = 9.0e-08
Identities = 23/72 (31%), Positives = 29/72 (40%)
Query: 8 CVPLLIGAVCGEKIDLNSDPCY-----ENGRPRRCIPDFVNAAFGQEVKVNSVCGLESPE 62
C LL GA G+ D N CY E R RC P+F N +E N G+
Sbjct: 656 CECLLSGAK-GQTCDSNGQ-CYCKGNFEGERCDRCKPNFYNFPICEECNCNP-SGVTRDF 712
Query: 63 RYCDTSGACHVC 74
+ CD +C
Sbjct: 713 QGCDKVSPGELC 724
Score = 38 (18.4 bits), Expect = 1.3e-05, Sum P(2) = 1.3e-05
Identities = 9/27 (33%), Positives = 12/27 (44%)
Query: 16 VCGEKIDLNSDPCYENGRPRRCIPDFV 42
VC D ++ C E C+P FV
Sbjct: 426 VCDCDPDKHTGACAEETGKCECLPRFV 452
>UNIPROTKB|A7MB18 [details] [associations]
symbol:NTN4 "NTN4 protein" species:9913 "Bos taurus"
[GO:0060668 "regulation of branching involved in salivary gland
morphogenesis by extracellular matrix-epithelial cell signaling"
evidence=IEA] [GO:0043237 "laminin-1 binding" evidence=IEA]
[GO:0016322 "neuron remodeling" evidence=IEA] [GO:0005576
"extracellular region" evidence=IEA] InterPro:IPR001134
PROSITE:PS50189 GO:GO:0016322 InterPro:IPR002049 InterPro:IPR008993
Pfam:PF00053 SMART:SM00180 SUPFAM:SSF50242 PROSITE:PS01248
PROSITE:PS50027 GO:GO:0005604 InterPro:IPR018933 Pfam:PF01759
SMART:SM00643 InterPro:IPR008211 Pfam:PF00055 SMART:SM00136
PROSITE:PS51117 GeneTree:ENSGT00700000104042 CTD:59277
eggNOG:NOG329215 HOVERGEN:HBG082019 KO:K06845 OMA:RSQDFGK
GO:GO:0060668 HOGENOM:HOG000060085 OrthoDB:EOG4M0F17
EMBL:DAAA02013606 EMBL:DAAA02013607 EMBL:BC151286 IPI:IPI00697984
RefSeq:NP_001095673.1 UniGene:Bt.26919 Ensembl:ENSBTAT00000004136
GeneID:537455 KEGG:bta:537455 InParanoid:A7MB18 NextBio:20877139
Uniprot:A7MB18
Length = 627
Score = 232 (86.7 bits), Expect = 1.8e-18, P = 1.8e-18
Identities = 55/140 (39%), Positives = 71/140 (50%)
Query: 200 GRCKCNGHASRCI--------KSPQGELV----CECRHNTAGKDCEKCKPFFSDRPWGRA 247
G C CNGHA +CI K+P V C C+HNTAG C+ C P ++DRPW A
Sbjct: 260 GSCFCNGHADQCIPIDGFRPVKAPGAFHVVHGKCICKHNTAGTHCQHCAPLYNDRPWEAA 319
Query: 248 T--VYDANECKGGRCKCNGHASRC-----IKSPQGAL---VC-ECRHNTAGKDCEKCKP- 295
NEC+ CKCNGHA C + G VC +C+HNT G+ C++CKP
Sbjct: 320 DGKTGSPNECR--TCKCNGHADACHFDINVWEASGNRSGGVCNDCQHNTEGQHCQRCKPG 377
Query: 296 FFSD--RPWGRATVYDANEC 313
F+ D RP+ + C
Sbjct: 378 FYWDLRRPFSAPDACKSCSC 397
Score = 167 (63.8 bits), Expect = 1.5e-09, P = 1.5e-09
Identities = 66/260 (25%), Positives = 109/260 (41%)
Query: 35 RRCIPDFVNAAFGQEVKVNSVCGLESPERYCDTSG---------ACHVCDAGSPR-GRFP 84
+ C P N A G+++ ++ CG + E YC S C C+A P P
Sbjct: 32 KACNPRMGNLALGRKLWTDTTCGQNATELYCFYSENTDLTCQQPKCDKCNAAQPHLAHLP 91
Query: 85 AEYLTDLNNPSNVTCWRSEAQTSVNSLSASPDNVTLTLSLGKKFELTYISLSFCPKSIKP 144
A + D + T W+S + L L +F T++ + F KS +P
Sbjct: 92 AA-MADSSFRYPRTWWQSAEDVHREKIQ---------LDLEAEFYFTHLIMVF--KSPRP 139
Query: 145 DSLAIYKSQDFGKSWQPLQFYSSQCKKLYGRTATGVISRGNEQEALCTDRHKKQ----GG 200
++ + +SQDFGK+W+P +++++ C +G V+ +G A+CT R+ GG
Sbjct: 140 AAMVLDRSQDFGKTWKPYKYFATNCSATFG-LEDDVVKKG----AICTSRYSNPFPCTGG 194
Query: 201 RCKCNGHAS-RCIKSPQGELVCECRHNT-------AGKDCEKCKPFFSDRP--WGRATVY 250
+ +++P G V E T + C + + P + +Y
Sbjct: 195 EVIFRALSPPNDMENPYGAKVQEQLKITNLRVQLLKRQSCPCQRNHLNAEPQHFTHYAIY 254
Query: 251 DANECKGGRCKCNGHASRCI 270
D KG C CNGHA +CI
Sbjct: 255 DFI-VKGS-CFCNGHADQCI 272
Score = 138 (53.6 bits), Expect = 6.5e-06, Sum P(2) = 6.5e-06
Identities = 37/107 (34%), Positives = 47/107 (43%)
Query: 202 CKCNGHASRC-----IKSPQGEL---VC-ECRHNTAGKDCEKCKPFFSDRPWGRATVYDA 252
CKCNGHA C + G VC +C+HNT G+ C++CKP F W + A
Sbjct: 332 CKCNGHADACHFDINVWEASGNRSGGVCNDCQHNTEGQHCQRCKPGFY---WDLRRPFSA 388
Query: 253 NE-CKGGRCKCNGHASRCIKS-----PQGALVCECRHNTAGKDCEKC 293
+ CK C G A S P C C+ AG CE+C
Sbjct: 389 PDACKSCSCHPVGSAVLPFSSVTFCDPSNG-DCPCKPGVAGPHCERC 434
Score = 38 (18.4 bits), Expect = 6.5e-06, Sum P(2) = 6.5e-06
Identities = 6/12 (50%), Positives = 8/12 (66%)
Query: 28 CYENGRPRRCIP 39
C+ NG +CIP
Sbjct: 262 CFCNGHADQCIP 273
>UNIPROTKB|G5E6L9 [details] [associations]
symbol:NTN5 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005576 "extracellular region" evidence=IEA]
InterPro:IPR001134 PROSITE:PS50189 GO:GO:0005576 InterPro:IPR002049
InterPro:IPR008993 Pfam:PF00053 SMART:SM00180 SUPFAM:SSF50242
PROSITE:PS01248 PROSITE:PS50027 InterPro:IPR018933 Pfam:PF01759
SMART:SM00643 GeneTree:ENSGT00700000104042 EMBL:DAAA02047467
Ensembl:ENSBTAT00000063836 Uniprot:G5E6L9
Length = 446
Score = 201 (75.8 bits), Expect = 1.8e-17, Sum P(2) = 1.8e-17
Identities = 56/194 (28%), Positives = 80/194 (41%)
Query: 114 SPDNVTLTLSLGKKFELTYISLSFCPKSIKPDSLAIYKSQDFGKSWQPLQFYSSQCKKLY 173
+P N +LTL LG F L+ +SL FC P +L + + G W+ L + L
Sbjct: 79 APCNGSLTLGLGGPFLLSSVSLRFCTPG--PPALVLSAAWATGGPWRSLWRRPAWPGVLG 136
Query: 174 G-RTATGVISRGNEQEALCTDRHKKQGGR-----------CKCNGHASRCIKSPQGELVC 221
G + G + + + + GGR C+C+GHA+RC + C
Sbjct: 137 GPERVIFRVPAGPKASVVASHLRLELGGRGGLAAAGVRGRCQCHGHAARCAARDRPPR-C 195
Query: 222 ECRHNTAGKDCEKCKPFFSDRPWGRATVYDANECKGGRCKCNGHASRCIKSPQGALVCEC 281
CRH+T G CE C+P D PW AT + C +C G G C C
Sbjct: 196 RCRHHTTGPGCESCQPSHRDWPWRPATPRHPHPCLPCQCHPIGATGGACNQTNGQ--CSC 253
Query: 282 RHNTAGKDCEKCKP 295
+ G C +C P
Sbjct: 254 KLGVTGLTCNRCGP 267
Score = 144 (55.7 bits), Expect = 2.4e-10, Sum P(2) = 2.4e-10
Identities = 25/56 (44%), Positives = 32/56 (57%)
Query: 258 GRCKCNGHASRCIKSPQGALVCECRHNTAGKDCEKCKPFFSDRPWGRATVYDANEC 313
GRC+C+GHA+RC + C CRH+T G CE C+P D PW AT + C
Sbjct: 175 GRCQCHGHAARCAARDRPPR-CRCRHHTTGPGCESCQPSHRDWPWRPATPRHPHPC 229
Score = 70 (29.7 bits), Expect = 1.8e-17, Sum P(2) = 1.8e-17
Identities = 16/39 (41%), Positives = 19/39 (48%)
Query: 24 NSDPCYE-NGRPRRCIPDFVNAAFGQEVKVNSVCGLESP 61
++DPCY GRPR C+P A G CG SP
Sbjct: 35 SADPCYHPGGRPRFCLPPVTQLA-GMAASCPQACG-PSP 71
>UNIPROTKB|F1N8P9 [details] [associations]
symbol:LAMA1 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0005102 "receptor binding" evidence=IEA] [GO:0005606
"laminin-1 complex" evidence=IEA] [GO:0007155 "cell adhesion"
evidence=IEA] [GO:0030155 "regulation of cell adhesion"
evidence=IEA] [GO:0030334 "regulation of cell migration"
evidence=IEA] [GO:0045995 "regulation of embryonic development"
evidence=IEA] InterPro:IPR009254 InterPro:IPR010307 Pfam:PF06008
Pfam:PF06009 GO:GO:0030155 GO:GO:0007155 InterPro:IPR013032
PROSITE:PS00022 Gene3D:2.60.120.200 InterPro:IPR008985
InterPro:IPR013320 SUPFAM:SSF49899 GO:GO:0030334 InterPro:IPR002049
InterPro:IPR001791 Pfam:PF00053 Pfam:PF00054 SMART:SM00180
SMART:SM00282 PROSITE:PS01248 PROSITE:PS50027 PROSITE:PS50025
Pfam:PF02210 GO:GO:0045995 GeneTree:ENSGT00700000104140
InterPro:IPR018031 InterPro:IPR000034 InterPro:IPR008211
Pfam:PF00052 Pfam:PF00055 SMART:SM00281 SMART:SM00136
PROSITE:PS51115 PROSITE:PS51117 GO:GO:0005606 EMBL:AADN02048198
EMBL:AADN02048199 EMBL:AADN02048200 EMBL:AADN02048201
EMBL:AADN02048202 EMBL:AADN02048203 EMBL:AADN02048204
EMBL:AADN02048205 EMBL:AADN02048206 EMBL:AADN02048207
EMBL:AADN02048208 EMBL:AADN02048209 EMBL:AADN02048210
EMBL:AADN02048211 EMBL:AADN02048212 EMBL:AADN02048213
EMBL:AADN02048214 EMBL:AADN02048215 IPI:IPI00823129
Ensembl:ENSGALT00000023564 ArrayExpress:F1N8P9 Uniprot:F1N8P9
Length = 3060
Score = 178 (67.7 bits), Expect = 4.1e-17, Sum P(2) = 4.1e-17
Identities = 41/132 (31%), Positives = 60/132 (45%)
Query: 199 GGRCKCNGHASRC-IKSPQGELVCECRHNTAGKDCEKCKPFFSDRPWGRATVYDANECKG 257
GG C C GHA C + +L C+C HNT G+ C +C P + +PW T+ N+C+
Sbjct: 248 GGMCICYGHARSCPLDEITKKLQCQCEHNTCGESCNRCCPGYHQKPWRPGTISAGNKCE- 306
Query: 258 GRCKCNGHASRCIKSPQ---------------GALVC-ECRHNTAGKDCEKCKPFFSDRP 301
+C C+ A C + G VC C +T G +CE C + RP
Sbjct: 307 -KCNCHNKAEDCYYNQTIADQKRSMNIHGQYTGGGVCLNCSQHTTGINCEMCADGYF-RP 364
Query: 302 WGRATVYDANEC 313
+ + YD + C
Sbjct: 365 Q-KVSPYDDHPC 375
Score = 148 (57.2 bits), Expect = 1.3e-13, Sum P(2) = 1.3e-13
Identities = 36/103 (34%), Positives = 46/103 (44%)
Query: 202 CKCNGHASRCIKSPQGELVC-ECRHNTAGKDCEKCKPFFSDRPWGRATVYDANECKGGRC 260
CKCNGHA+ C QG VC C+HNT G C++C P F P + T D C
Sbjct: 723 CKCNGHATEC--DTQG--VCFACQHNTTGPFCDQCLPGFYGSP-SQGTPEDCQPCACPLS 777
Query: 261 KC-NGHASRCIKSPQGALVCE-CRHNTAGKDCEKCKPFFSDRP 301
N + C S +VC+ C G CE+C + P
Sbjct: 778 SAANNFSPTCQLSEGEGIVCDKCLPGYTGSRCERCANGYYGNP 820
Score = 143 (55.4 bits), Expect = 5.0e-13, Sum P(2) = 5.0e-13
Identities = 38/101 (37%), Positives = 47/101 (46%)
Query: 214 SPQGELVCECRHNTAGKDCEKCKPFFSDRPWGRATVYDANECKGGRCKCNGHASRCIKSP 273
+P E CEC G CE C P + R G + C+ CKCNGHA+ C
Sbjct: 684 APDVEF-CECPQGYTGISCESCLPGYY-RVDG---ILFGGICQP--CKCNGHATEC--DT 734
Query: 274 QGALVC-ECRHNTAGKDCEKCKPFFSDRPWGRATVYDANEC 313
QG VC C+HNT G C++C P F P + T D C
Sbjct: 735 QG--VCFACQHNTTGPFCDQCLPGFYGSP-SQGTPEDCQPC 772
Score = 142 (55.0 bits), Expect = 6.5e-13, Sum P(2) = 6.5e-13
Identities = 23/59 (38%), Positives = 32/59 (54%)
Query: 257 GGRCKCNGHASRC-IKSPQGALVCECRHNTAGKDCEKCKPFFSDRPWGRATVYDANECK 314
GG C C GHA C + L C+C HNT G+ C +C P + +PW T+ N+C+
Sbjct: 248 GGMCICYGHARSCPLDEITKKLQCQCEHNTCGESCNRCCPGYHQKPWRPGTISAGNKCE 306
Score = 118 (46.6 bits), Expect = 3.2e-10, Sum P(2) = 3.2e-10
Identities = 31/100 (31%), Positives = 45/100 (45%)
Query: 202 CKCNGHASRCIKSPQGELVCE--------CRHNTAGKDCEKCKPFFSDRPWGRATVYDAN 253
C+CNG+ + PQ + C+ C NTAG CEKC +D +G A
Sbjct: 830 CECNGNVN-----PQEDGYCDTITGQCLKCVGNTAGLHCEKC----ADGYYGDAVT--EK 878
Query: 254 ECKGGRCKCNGHASRCIKSPQGALVCECRHNTAGKDCEKC 293
C+ C NG S G +C+C+ + G+ C+KC
Sbjct: 879 SCRACECHVNGSLSSVCHHETG--ICDCKSDVIGQKCDKC 916
Score = 117 (46.2 bits), Expect = 4.1e-17, Sum P(2) = 4.1e-17
Identities = 41/175 (23%), Positives = 76/175 (43%)
Query: 39 PDFVNAAFGQEVKVNSVCGLESPERYCDT----------SGACHVCD--AGSPRGRFPAE 86
P +N A + N+ CG + PE +C + C VCD + +P+ + P
Sbjct: 5 PAILNLASNAHISTNATCGEKGPEMFCKLVEHVPGRPLRNSQCRVCDRHSANPKEQHPIS 64
Query: 87 YLTDLNNPSNVTCWRSEAQTSVNSLSASPDNVTLTLSLGKKFELTYISLSFCPKSIKPDS 146
D N W+S S+ + VT+TL L + F++ Y+ + + +P +
Sbjct: 65 SAIDGTN----NWWQSP---SIQN-GRQYHWVTITLDLRQVFQVAYVIIKSA-NAPRPGN 115
Query: 147 LAIYKSQDFGKSWQPLQFYS---SQCKKLYGRTA-TGVISRGNEQEALCTDRHKK 197
+ +S D G ++P Q+Y+ ++C Y T G + + E +CT + +
Sbjct: 116 WILERSID-GTEFKPWQYYAISDTECLTRYNITPRVGPPTYKRDDEVICTSYYSR 169
Score = 113 (44.8 bits), Expect = 1.1e-09, Sum P(2) = 1.1e-09
Identities = 29/97 (29%), Positives = 41/97 (42%)
Query: 221 CECRHNTAGKDCEKCKP-FFSDRPWG---RATVYDANECKGGRCKCNGHASRCIKSPQGA 276
C C AG C+ C P ++ ++P R T C C+CN H+ C P+
Sbjct: 1343 CRCPAGYAGFSCQNCAPGYYREKPKEFSVRETHTIIAPCVP--CQCNNHSETC--DPETG 1398
Query: 277 LVCECRHNTAGKDCEKCKPFFSDRPWGRATVYDANEC 313
CR NT G C C P + + G +V D + C
Sbjct: 1399 KCLNCRDNTVGDYCSACAPGYYGKVIG--SVNDCSLC 1433
Score = 112 (44.5 bits), Expect = 1.4e-09, Sum P(2) = 1.4e-09
Identities = 28/100 (28%), Positives = 41/100 (41%)
Query: 202 CKCNGHASRCIKSPQGELVCECRHNTAGKDCEKCKPFFSDRPWGRATVYDANECKGGRCK 261
C+CN H+ C P+ CR NT G C C P + + G +V D + C R
Sbjct: 1384 CQCNNHSETC--DPETGKCLNCRDNTVGDYCSACAPGYYGKVIG--SVNDCSLCACPRAN 1439
Query: 262 CNGHASRCIKSPQGALVCE-CRHNTAGKDCEKCK-PFFSD 299
+ C+ C+ C G+ CEKC ++ D
Sbjct: 1440 PVSFSPTCVLKGVQDYHCDACLPGYEGQYCEKCSLGYYGD 1479
Score = 109 (43.4 bits), Expect = 2.8e-09, Sum P(2) = 2.8e-09
Identities = 31/119 (26%), Positives = 50/119 (42%)
Query: 182 SRGNEQEALCTDRH----KKQGGR-CKCNGHASRCIKSPQGELVCECRHNTAGKDCEKCK 236
+RG + + LC + H K G + C C+ S ++ C+C+ G++C +C
Sbjct: 1001 TRGPKCD-LCEENHWGLSPKLGCKACNCSDSGSDSLQCDVLTGQCQCKAEFGGQNCSRCA 1059
Query: 237 PFFSDRPWGRATVYDANECKGGRCKCNGHASRCIKSPQGALVCECRHNTAGKDCEKCKP 295
+ D P A D + K C C + G +C C+ N G C +CKP
Sbjct: 1060 LGYRDYPDCVACDCDLSGTKAEMCDDTKGLCGC-EEETG--ICACKENVFGLQCSECKP 1115
Score = 93 (37.8 bits), Expect = 1.2e-07, Sum P(2) = 1.2e-07
Identities = 24/100 (24%), Positives = 40/100 (40%)
Query: 202 CKCNGHASRCIKSPQGELVCECRHNTAGKDCEKCKPFFSDRPWGRATVYDANECKGGRCK 261
C C H + G+ C C +T G C+ C+ + WG + CK C
Sbjct: 979 CDC-AHTQNNCNADSGQ--CICPPHTRGPKCDLCE----ENHWGLSPKLG---CKA--CN 1026
Query: 262 CNGHASRCIKSPQGALVCECRHNTAGKDCEKCKPFFSDRP 301
C+ S ++ C+C+ G++C +C + D P
Sbjct: 1027 CSDSGSDSLQCDVLTGQCQCKAEFGGQNCSRCALGYRDYP 1066
Score = 88 (36.0 bits), Expect = 4.0e-07, Sum P(2) = 4.0e-07
Identities = 23/77 (29%), Positives = 33/77 (42%)
Query: 221 CECRHNTAGKDCEKCKPFFSDRPWGRATVYDANECKGGRCKCNGHASRCIKSPQGALVCE 280
C+CR G+ C++C + P C RC C+ S I A C
Sbjct: 408 CQCRDGYTGEKCDRCAFGYRGYP----------NCL--RCNCSLIGS--INEDPCAEPCL 453
Query: 281 CRHNTAGKDCEKCKPFF 297
C+ N G++C+ CKP F
Sbjct: 454 CKENVEGENCDLCKPGF 470
Score = 84 (34.6 bits), Expect = 1.0e-06, Sum P(2) = 1.0e-06
Identities = 29/101 (28%), Positives = 43/101 (42%)
Query: 205 NGHASRCIKSPQGE-LVCE-CRHNTAGKDCEKCKPFFSDRPWGRATVYDANECKGGRCKC 262
N + C S +GE +VC+ C G CE+C + P + C C+C
Sbjct: 781 NNFSPTCQLS-EGEGIVCDKCLPGYTGSRCERCANGYYGNP-----LVPGQSCVP--CEC 832
Query: 263 NGHASRCIKSPQGALV--C-ECRHNTAGKDCEKCKP-FFSD 299
NG+ + + C +C NTAG CEKC ++ D
Sbjct: 833 NGNVNPQEDGYCDTITGQCLKCVGNTAGLHCEKCADGYYGD 873
Score = 78 (32.5 bits), Expect = 4.3e-06, Sum P(2) = 4.3e-06
Identities = 21/86 (24%), Positives = 33/86 (38%)
Query: 211 CIKSPQGELVCE-CRHNTAGKDCEKCKPFFSDRPWGRATVYDANECKGGRCKCNGHASRC 269
C+ + C+ C G+ CEKC + P C C+CN S
Sbjct: 1447 CVLKGVQDYHCDACLPGYEGQYCEKCSLGYYGDPQ-----LPGGSCH--LCQCNPSGSVH 1499
Query: 270 IKSPQGALVCECRHNTAGKDCEKCKP 295
+ + C C+ G+ CE+C+P
Sbjct: 1500 VNCDRVTGKCPCKQGVTGQLCEECEP 1525
Score = 66 (28.3 bits), Expect = 7.2e-05, Sum P(2) = 7.2e-05
Identities = 11/36 (30%), Positives = 18/36 (50%)
Query: 202 CKCNGHASRCIKSPQGELVCECRHNTAGKDCEKCKP 237
C+CN S + + C C+ G+ CE+C+P
Sbjct: 1490 CQCNPSGSVHVNCDRVTGKCPCKQGVTGQLCEECEP 1525
Score = 54 (24.1 bits), Expect = 0.00093, Sum P(2) = 0.00093
Identities = 18/63 (28%), Positives = 27/63 (42%)
Query: 65 CDTSGACHVCDAGSPRGRFPAEYLTDL-NNPSNVTCWRSEAQTSVNSLSASPDNVTLTLS 123
CDT G C C + G F + L +PS T + Q LS++ +N + T
Sbjct: 732 CDTQGVCFACQHNTT-GPFCDQCLPGFYGSPSQGT--PEDCQPCACPLSSAANNFSPTCQ 788
Query: 124 LGK 126
L +
Sbjct: 789 LSE 791
>UNIPROTKB|F1NM47 [details] [associations]
symbol:LAMA1 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0005102 "receptor binding" evidence=IEA] [GO:0007155
"cell adhesion" evidence=IEA] [GO:0030155 "regulation of cell
adhesion" evidence=IEA] [GO:0030334 "regulation of cell migration"
evidence=IEA] [GO:0045995 "regulation of embryonic development"
evidence=IEA] [GO:0002011 "morphogenesis of an epithelial sheet"
evidence=IEA] [GO:0005201 "extracellular matrix structural
constituent" evidence=IEA] [GO:0005606 "laminin-1 complex"
evidence=IEA] [GO:0005608 "laminin-3 complex" evidence=IEA]
[GO:0005615 "extracellular space" evidence=IEA] [GO:0005911
"cell-cell junction" evidence=IEA] [GO:0007166 "cell surface
receptor signaling pathway" evidence=IEA] [GO:0031175 "neuron
projection development" evidence=IEA] [GO:0043208
"glycosphingolipid binding" evidence=IEA] [GO:0045198
"establishment of epithelial cell apical/basal polarity"
evidence=IEA] [GO:0060441 "epithelial tube branching involved in
lung morphogenesis" evidence=IEA] [GO:0060445 "branching involved
in salivary gland morphogenesis" evidence=IEA] [GO:0061304 "retinal
blood vessel morphogenesis" evidence=IEA] InterPro:IPR009254
InterPro:IPR010307 Pfam:PF06008 Pfam:PF06009 GO:GO:0005615
GO:GO:0030155 GO:GO:0007155 GO:GO:0005911 InterPro:IPR013032
PROSITE:PS00022 Gene3D:2.60.120.200 InterPro:IPR008985
InterPro:IPR013320 SUPFAM:SSF49899 GO:GO:0030334 GO:GO:0007166
InterPro:IPR002049 InterPro:IPR001791 Pfam:PF00053 Pfam:PF00054
SMART:SM00180 SMART:SM00282 PROSITE:PS01248 PROSITE:PS50027
PROSITE:PS50025 Pfam:PF02210 GO:GO:0045995 GO:GO:0005201
GO:GO:0043208 GeneTree:ENSGT00700000104140 InterPro:IPR018031
InterPro:IPR000034 InterPro:IPR008211 Pfam:PF00052 Pfam:PF00055
SMART:SM00281 SMART:SM00136 PROSITE:PS51115 PROSITE:PS51117
OMA:EPFYWRL GO:GO:0005606 GO:GO:0005608 EMBL:AADN02048198
EMBL:AADN02048199 EMBL:AADN02048200 EMBL:AADN02048201
EMBL:AADN02048202 EMBL:AADN02048203 EMBL:AADN02048204
EMBL:AADN02048205 EMBL:AADN02048206 EMBL:AADN02048207
EMBL:AADN02048208 EMBL:AADN02048209 EMBL:AADN02048210
EMBL:AADN02048211 EMBL:AADN02048212 EMBL:AADN02048213
EMBL:AADN02048214 EMBL:AADN02048215 IPI:IPI00587004
Ensembl:ENSGALT00000036890 ArrayExpress:F1NM47 Uniprot:F1NM47
Length = 3061
Score = 178 (67.7 bits), Expect = 4.1e-17, Sum P(2) = 4.1e-17
Identities = 41/132 (31%), Positives = 60/132 (45%)
Query: 199 GGRCKCNGHASRC-IKSPQGELVCECRHNTAGKDCEKCKPFFSDRPWGRATVYDANECKG 257
GG C C GHA C + +L C+C HNT G+ C +C P + +PW T+ N+C+
Sbjct: 248 GGMCICYGHARSCPLDEITKKLQCQCEHNTCGESCNRCCPGYHQKPWRPGTISAGNKCE- 306
Query: 258 GRCKCNGHASRCIKSPQ---------------GALVC-ECRHNTAGKDCEKCKPFFSDRP 301
+C C+ A C + G VC C +T G +CE C + RP
Sbjct: 307 -KCNCHNKAEDCYYNQTIADQKRSMNIHGQYTGGGVCLNCSQHTTGINCEMCADGYF-RP 364
Query: 302 WGRATVYDANEC 313
+ + YD + C
Sbjct: 365 Q-KVSPYDDHPC 375
Score = 148 (57.2 bits), Expect = 1.4e-13, Sum P(2) = 1.4e-13
Identities = 36/103 (34%), Positives = 46/103 (44%)
Query: 202 CKCNGHASRCIKSPQGELVC-ECRHNTAGKDCEKCKPFFSDRPWGRATVYDANECKGGRC 260
CKCNGHA+ C QG VC C+HNT G C++C P F P + T D C
Sbjct: 723 CKCNGHATEC--DTQG--VCFACQHNTTGPFCDQCLPGFYGSP-SQGTPEDCQPCACPLS 777
Query: 261 KC-NGHASRCIKSPQGALVCE-CRHNTAGKDCEKCKPFFSDRP 301
N + C S +VC+ C G CE+C + P
Sbjct: 778 SAANNFSPTCQLSEGEGIVCDKCLPGYTGSRCERCANGYYGNP 820
Score = 143 (55.4 bits), Expect = 5.0e-13, Sum P(2) = 5.0e-13
Identities = 38/101 (37%), Positives = 47/101 (46%)
Query: 214 SPQGELVCECRHNTAGKDCEKCKPFFSDRPWGRATVYDANECKGGRCKCNGHASRCIKSP 273
+P E CEC G CE C P + R G + C+ CKCNGHA+ C
Sbjct: 684 APDVEF-CECPQGYTGISCESCLPGYY-RVDG---ILFGGICQP--CKCNGHATEC--DT 734
Query: 274 QGALVC-ECRHNTAGKDCEKCKPFFSDRPWGRATVYDANEC 313
QG VC C+HNT G C++C P F P + T D C
Sbjct: 735 QG--VCFACQHNTTGPFCDQCLPGFYGSP-SQGTPEDCQPC 772
Score = 142 (55.0 bits), Expect = 6.5e-13, Sum P(2) = 6.5e-13
Identities = 23/59 (38%), Positives = 32/59 (54%)
Query: 257 GGRCKCNGHASRC-IKSPQGALVCECRHNTAGKDCEKCKPFFSDRPWGRATVYDANECK 314
GG C C GHA C + L C+C HNT G+ C +C P + +PW T+ N+C+
Sbjct: 248 GGMCICYGHARSCPLDEITKKLQCQCEHNTCGESCNRCCPGYHQKPWRPGTISAGNKCE 306
Score = 118 (46.6 bits), Expect = 3.2e-10, Sum P(2) = 3.2e-10
Identities = 31/100 (31%), Positives = 45/100 (45%)
Query: 202 CKCNGHASRCIKSPQGELVCE--------CRHNTAGKDCEKCKPFFSDRPWGRATVYDAN 253
C+CNG+ + PQ + C+ C NTAG CEKC +D +G A
Sbjct: 830 CECNGNVN-----PQEDGYCDTITGQCLKCVGNTAGLHCEKC----ADGYYGDAVT--EK 878
Query: 254 ECKGGRCKCNGHASRCIKSPQGALVCECRHNTAGKDCEKC 293
C+ C NG S G +C+C+ + G+ C+KC
Sbjct: 879 SCRACECHVNGSLSSVCHHETG--ICDCKSDVIGQKCDKC 916
Score = 117 (46.2 bits), Expect = 4.1e-17, Sum P(2) = 4.1e-17
Identities = 41/175 (23%), Positives = 76/175 (43%)
Query: 39 PDFVNAAFGQEVKVNSVCGLESPERYCDT----------SGACHVCD--AGSPRGRFPAE 86
P +N A + N+ CG + PE +C + C VCD + +P+ + P
Sbjct: 5 PAILNLASNAHISTNATCGEKGPEMFCKLVEHVPGRPLRNSQCRVCDRHSANPKEQHPIS 64
Query: 87 YLTDLNNPSNVTCWRSEAQTSVNSLSASPDNVTLTLSLGKKFELTYISLSFCPKSIKPDS 146
D N W+S S+ + VT+TL L + F++ Y+ + + +P +
Sbjct: 65 SAIDGTN----NWWQSP---SIQN-GRQYHWVTITLDLRQVFQVAYVIIKSA-NAPRPGN 115
Query: 147 LAIYKSQDFGKSWQPLQFYS---SQCKKLYGRTA-TGVISRGNEQEALCTDRHKK 197
+ +S D G ++P Q+Y+ ++C Y T G + + E +CT + +
Sbjct: 116 WILERSID-GTEFKPWQYYAISDTECLTRYNITPRVGPPTYKRDDEVICTSYYSR 169
Score = 113 (44.8 bits), Expect = 1.1e-09, Sum P(2) = 1.1e-09
Identities = 29/97 (29%), Positives = 41/97 (42%)
Query: 221 CECRHNTAGKDCEKCKP-FFSDRPWG---RATVYDANECKGGRCKCNGHASRCIKSPQGA 276
C C AG C+ C P ++ ++P R T C C+CN H+ C P+
Sbjct: 1343 CRCPAGYAGFSCQNCAPGYYREKPKEFSVRETHTIIAPCVP--CQCNNHSETC--DPETG 1398
Query: 277 LVCECRHNTAGKDCEKCKPFFSDRPWGRATVYDANEC 313
CR NT G C C P + + G +V D + C
Sbjct: 1399 KCLNCRDNTVGDYCSACAPGYYGKVIG--SVNDCSLC 1433
Score = 112 (44.5 bits), Expect = 1.4e-09, Sum P(2) = 1.4e-09
Identities = 28/100 (28%), Positives = 41/100 (41%)
Query: 202 CKCNGHASRCIKSPQGELVCECRHNTAGKDCEKCKPFFSDRPWGRATVYDANECKGGRCK 261
C+CN H+ C P+ CR NT G C C P + + G +V D + C R
Sbjct: 1384 CQCNNHSETC--DPETGKCLNCRDNTVGDYCSACAPGYYGKVIG--SVNDCSLCACPRAN 1439
Query: 262 CNGHASRCIKSPQGALVCE-CRHNTAGKDCEKCK-PFFSD 299
+ C+ C+ C G+ CEKC ++ D
Sbjct: 1440 PVSFSPTCVLKGVQDYHCDACLPGYEGQYCEKCSLGYYGD 1479
Score = 109 (43.4 bits), Expect = 2.8e-09, Sum P(2) = 2.8e-09
Identities = 31/119 (26%), Positives = 50/119 (42%)
Query: 182 SRGNEQEALCTDRH----KKQGGR-CKCNGHASRCIKSPQGELVCECRHNTAGKDCEKCK 236
+RG + + LC + H K G + C C+ S ++ C+C+ G++C +C
Sbjct: 1001 TRGPKCD-LCEENHWGLSPKLGCKACNCSDSGSDSLQCDVLTGQCQCKAEFGGQNCSRCA 1059
Query: 237 PFFSDRPWGRATVYDANECKGGRCKCNGHASRCIKSPQGALVCECRHNTAGKDCEKCKP 295
+ D P A D + K C C + G +C C+ N G C +CKP
Sbjct: 1060 LGYRDYPDCVACDCDLSGTKAEMCDDTKGLCGC-EEETG--ICACKENVFGLQCSECKP 1115
Score = 93 (37.8 bits), Expect = 1.2e-07, Sum P(2) = 1.2e-07
Identities = 24/100 (24%), Positives = 40/100 (40%)
Query: 202 CKCNGHASRCIKSPQGELVCECRHNTAGKDCEKCKPFFSDRPWGRATVYDANECKGGRCK 261
C C H + G+ C C +T G C+ C+ + WG + CK C
Sbjct: 979 CDC-AHTQNNCNADSGQ--CICPPHTRGPKCDLCE----ENHWGLSPKLG---CKA--CN 1026
Query: 262 CNGHASRCIKSPQGALVCECRHNTAGKDCEKCKPFFSDRP 301
C+ S ++ C+C+ G++C +C + D P
Sbjct: 1027 CSDSGSDSLQCDVLTGQCQCKAEFGGQNCSRCALGYRDYP 1066
Score = 88 (36.0 bits), Expect = 4.0e-07, Sum P(2) = 4.0e-07
Identities = 23/77 (29%), Positives = 33/77 (42%)
Query: 221 CECRHNTAGKDCEKCKPFFSDRPWGRATVYDANECKGGRCKCNGHASRCIKSPQGALVCE 280
C+CR G+ C++C + P C RC C+ S I A C
Sbjct: 408 CQCRDGYTGEKCDRCAFGYRGYP----------NCL--RCNCSLIGS--INEDPCAEPCL 453
Query: 281 CRHNTAGKDCEKCKPFF 297
C+ N G++C+ CKP F
Sbjct: 454 CKENVEGENCDLCKPGF 470
Score = 84 (34.6 bits), Expect = 1.0e-06, Sum P(2) = 1.0e-06
Identities = 29/101 (28%), Positives = 43/101 (42%)
Query: 205 NGHASRCIKSPQGE-LVCE-CRHNTAGKDCEKCKPFFSDRPWGRATVYDANECKGGRCKC 262
N + C S +GE +VC+ C G CE+C + P + C C+C
Sbjct: 781 NNFSPTCQLS-EGEGIVCDKCLPGYTGSRCERCANGYYGNP-----LVPGQSCVP--CEC 832
Query: 263 NGHASRCIKSPQGALV--C-ECRHNTAGKDCEKCKP-FFSD 299
NG+ + + C +C NTAG CEKC ++ D
Sbjct: 833 NGNVNPQEDGYCDTITGQCLKCVGNTAGLHCEKCADGYYGD 873
Score = 78 (32.5 bits), Expect = 4.3e-06, Sum P(2) = 4.3e-06
Identities = 21/86 (24%), Positives = 33/86 (38%)
Query: 211 CIKSPQGELVCE-CRHNTAGKDCEKCKPFFSDRPWGRATVYDANECKGGRCKCNGHASRC 269
C+ + C+ C G+ CEKC + P C C+CN S
Sbjct: 1447 CVLKGVQDYHCDACLPGYEGQYCEKCSLGYYGDPQ-----LPGGSCH--LCQCNPSGSVH 1499
Query: 270 IKSPQGALVCECRHNTAGKDCEKCKP 295
+ + C C+ G+ CE+C+P
Sbjct: 1500 VNCDRVTGKCPCKQGVTGQLCEECEP 1525
Score = 66 (28.3 bits), Expect = 7.2e-05, Sum P(2) = 7.2e-05
Identities = 11/36 (30%), Positives = 18/36 (50%)
Query: 202 CKCNGHASRCIKSPQGELVCECRHNTAGKDCEKCKP 237
C+CN S + + C C+ G+ CE+C+P
Sbjct: 1490 CQCNPSGSVHVNCDRVTGKCPCKQGVTGQLCEECEP 1525
Score = 54 (24.1 bits), Expect = 0.00093, Sum P(2) = 0.00093
Identities = 18/63 (28%), Positives = 27/63 (42%)
Query: 65 CDTSGACHVCDAGSPRGRFPAEYLTDL-NNPSNVTCWRSEAQTSVNSLSASPDNVTLTLS 123
CDT G C C + G F + L +PS T + Q LS++ +N + T
Sbjct: 732 CDTQGVCFACQHNTT-GPFCDQCLPGFYGSPSQGT--PEDCQPCACPLSSAANNFSPTCQ 788
Query: 124 LGK 126
L +
Sbjct: 789 LSE 791
>UNIPROTKB|F1P420 [details] [associations]
symbol:LAMA2 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0005102 "receptor binding" evidence=IEA] [GO:0005606
"laminin-1 complex" evidence=IEA] [GO:0007155 "cell adhesion"
evidence=IEA] [GO:0030155 "regulation of cell adhesion"
evidence=IEA] [GO:0030334 "regulation of cell migration"
evidence=IEA] [GO:0045995 "regulation of embryonic development"
evidence=IEA] [GO:0007411 "axon guidance" evidence=IEA] [GO:0032224
"positive regulation of synaptic transmission, cholinergic"
evidence=IEA] [GO:0042383 "sarcolemma" evidence=IEA]
InterPro:IPR009254 InterPro:IPR010307 Pfam:PF06008 Pfam:PF06009
GO:GO:0030155 GO:GO:0007155 GO:GO:0042383 Gene3D:2.60.120.200
InterPro:IPR008985 InterPro:IPR013320 SUPFAM:SSF49899 GO:GO:0030334
InterPro:IPR002049 InterPro:IPR001791 Pfam:PF00053 Pfam:PF00054
SMART:SM00180 SMART:SM00282 PROSITE:PS01248 PROSITE:PS50027
PROSITE:PS50025 Pfam:PF02210 GO:GO:0045995 GO:GO:0032224
GeneTree:ENSGT00700000104140 InterPro:IPR018031 InterPro:IPR000034
InterPro:IPR008211 Pfam:PF00052 Pfam:PF00055 SMART:SM00281
SMART:SM00136 PROSITE:PS51115 PROSITE:PS51117 GO:GO:0005606
OMA:NCNSFGS EMBL:AADN02049678 EMBL:AADN02049679 EMBL:AADN02049680
EMBL:AADN02049681 EMBL:AADN02049682 EMBL:AADN02049683
EMBL:AADN02049684 EMBL:AADN02049685 EMBL:AADN02049686
EMBL:AADN02049687 EMBL:AADN02049688 EMBL:AADN02049689
EMBL:AADN02049690 EMBL:AADN02049691 EMBL:AADN02049692
EMBL:AADN02049693 EMBL:AADN02049694 EMBL:AADN02049695
EMBL:AADN02049696 EMBL:AADN02049697 EMBL:AADN02049698
EMBL:AADN02049699 EMBL:AADN02049700 EMBL:AADN02049701
EMBL:AADN02049702 EMBL:AADN02049703 EMBL:AADN02049704
EMBL:AADN02049705 EMBL:AADN02049706 EMBL:AADN02049707
IPI:IPI00582275 Ensembl:ENSGALT00000022704 Uniprot:F1P420
Length = 3090
Score = 175 (66.7 bits), Expect = 7.6e-17, Sum P(2) = 7.6e-17
Identities = 40/122 (32%), Positives = 55/122 (45%)
Query: 199 GGRCKCNGHASRCIKSP-QGELVCECRHNTAGKDCEKCKPFFSDRPWGRATVYDANECKG 257
GG C C+GHA C P + VC+C HNT G+ C++C P F+ +PW T ++C+
Sbjct: 246 GGMCICSGHAKACPLDPVTNKSVCQCEHNTCGETCDRCCPGFNQKPWHAGTFLVKHQCEP 305
Query: 258 GRCKCNGHASRCIKSPQ---------------GALVC-ECRHNTAGKDCEKCKPFFSDRP 301
C C+G C G VC C +T G +CE C + RP
Sbjct: 306 --CNCHGKTEECYYDQNVADRNQSLNIFGEYIGGGVCVNCTSHTDGINCETCVDGYF-RP 362
Query: 302 WG 303
G
Sbjct: 363 KG 364
Score = 150 (57.9 bits), Expect = 6.4e-14, Sum P(2) = 6.4e-14
Identities = 24/59 (40%), Positives = 34/59 (57%)
Query: 257 GGRCKCNGHASRCIKSP-QGALVCECRHNTAGKDCEKCKPFFSDRPWGRATVYDANECK 314
GG C C+GHA C P VC+C HNT G+ C++C P F+ +PW T ++C+
Sbjct: 246 GGMCICSGHAKACPLDPVTNKSVCQCEHNTCGETCDRCCPGFNQKPWHAGTFLVKHQCE 304
Score = 144 (55.7 bits), Expect = 3.1e-13, Sum P(2) = 3.1e-13
Identities = 30/85 (35%), Positives = 44/85 (51%)
Query: 214 SPQGELV--CECRHNTAGKDCEKCKPFFSDRP---WGRATVYDANECKGGRCKCNGHASR 268
+PQ L+ C+C +G CE C P F P GR C C+C+GH++
Sbjct: 1336 TPQANLIEQCDCPLGYSGLSCESCSPGFYRLPASHGGRIPSQSLGACVV--CQCHGHSTM 1393
Query: 269 CIKSPQGALVCECRHNTAGKDCEKC 293
C P+ ++ C+HNTAG+ CE+C
Sbjct: 1394 C--DPKTSVCQNCQHNTAGQHCERC 1416
Score = 138 (53.6 bits), Expect = 1.5e-12, Sum P(2) = 1.5e-12
Identities = 34/97 (35%), Positives = 45/97 (46%)
Query: 202 CKCNGHASRCIKSPQGEL--VCE-CRHNTAGKDCEKCKPFFSDRPWGRATVYDANECKGG 258
C+CN + I L C C+ T G+ CE+C +D +G A DA C+
Sbjct: 828 CQCNNNLDFSIPGSCDSLSGACLICKSGTTGQYCERC----ADGYFGDAL--DARNCQPC 881
Query: 259 RCKCNGHASRCIKSPQGALVCECRHNTAGKDCEKCKP 295
RC NG S S G CEC+ N G+ C+ CKP
Sbjct: 882 RCHVNGSISEICDSQTGQ--CECKANVIGRQCDTCKP 916
Score = 132 (51.5 bits), Expect = 7.1e-12, Sum P(2) = 7.1e-12
Identities = 32/102 (31%), Positives = 43/102 (42%)
Query: 202 CKCNGHASRCIKSPQGELVCECRHNTAGKDCEKCKPFFSDRPWGRATVYDANECKGG-RC 260
C C GHA C GE + +C+HNT G C++C P F P + T D C
Sbjct: 720 CTCFGHAESC-DDITGECL-DCKHNTGGSYCDRCLPGFYGDPT-KGTAEDCQLCACPLNI 776
Query: 261 KCNGHASRCIKSPQGALVC-ECRHNTAGKDCEKCKPFFSDRP 301
N + C L+C EC G CE+C + +P
Sbjct: 777 PSNNFSPTCHFDQSHGLICDECPVGYVGPRCERCAEGYFGQP 818
Score = 128 (50.1 bits), Expect = 2.0e-11, Sum P(2) = 2.0e-11
Identities = 29/102 (28%), Positives = 45/102 (44%)
Query: 202 CKCNGHASRCIKSPQGELVCECRHNTAGKDCEKCKPFFSDRPWGRATVYDANECKGG-RC 260
C+C+GH++ C P+ + C+HNTAG+ CE+C F G D C
Sbjct: 1385 CQCHGHSTMC--DPKTSVCQNCQHNTAGQHCERCALGFYGIIQGSPE--DCQPCACPLSI 1440
Query: 261 KCNGHASRCI-KSPQGALVCECRHNTAGKDCEKCKPFFSDRP 301
N + C+ + P C G+ CE+C P ++ P
Sbjct: 1441 SSNNFSPSCVVEGPSDYRCTACPPGYEGQYCERCSPGYTGNP 1482
Score = 125 (49.1 bits), Expect = 4.3e-11, Sum P(2) = 4.3e-11
Identities = 34/114 (29%), Positives = 46/114 (40%)
Query: 193 DRHKKQGGRCKCNGHASRCIKSPQGELVCECRHNTAGKDCEKCKPFFSDRPWGRATVYDA 252
D Q RC NG S S G+ CEC+ N G+ C+ CKP +G + +
Sbjct: 874 DARNCQPCRCHVNGSISEICDSQTGQ--CECKANVIGRQCDTCKP----ETFG---LQSS 924
Query: 253 NECKGGRCKCNGHASRCIKSPQGALVCECRHNTAGKDCEKCKPFFSDRPWGRAT 306
C C CN S+ G C C+ GK C++C F + G T
Sbjct: 925 RGCVP--CNCNSFGSKSFDC-DGNGQCYCQPGVTGKKCDRCAHGFYNFEEGGCT 975
Score = 121 (47.7 bits), Expect = 1.2e-10, Sum P(2) = 1.2e-10
Identities = 37/104 (35%), Positives = 46/104 (44%)
Query: 210 RCIKSPQGELVCECRHNTAGKDCEKCKPFFSDRPWGRATVYDANECKGGRCKCNGHASRC 269
R + SP EL C+C AG CE C P R G T++ C C C GHA C
Sbjct: 678 RKLASPV-EL-CDCPPGYAGTSCEYCWPQHR-RVNG--TIF-GGVCTP--CTCFGHAESC 729
Query: 270 IKSPQGALVCECRHNTAGKDCEKCKPFFSDRPWGRATVYDANEC 313
L +C+HNT G C++C P F P + T D C
Sbjct: 730 DDITGECL--DCKHNTGGSYCDRCLPGFYGDPT-KGTAEDCQLC 770
Score = 118 (46.6 bits), Expect = 7.6e-17, Sum P(2) = 7.6e-17
Identities = 45/173 (26%), Positives = 74/173 (42%)
Query: 39 PDFVNAAFGQEVKVNSVCGLESPERYCDT----------SGACHVCDAGSPRGRFPAEYL 88
P +N A + N+ CG + E YC + C +CD S R +
Sbjct: 3 PAVLNLATNALITTNATCGEKGREMYCKLVEHVPGQPARNPQCRICDQRS-RVLHQRHPI 61
Query: 89 TDLNNPSNVTCWRSEAQTSVNSLSASPDNVTLTLSLGKKFELTYISLSFCPKSIKPDSLA 148
T+ + N T W+S S+ + VT+TL L + F++ Y+ + S +P +
Sbjct: 62 TNAIDGKN-TWWQSP---SIQN-GIEYHYVTITLDLQQIFQIAYVIVK-AANSPRPGNWI 115
Query: 149 IYKSQDFGKSWQPLQFYS---SQCKKLYG-RTATGVISRGNEQEALCTDRHKK 197
+ +S D G +QP Q+Y+ S+C Y G S + E +CT + K
Sbjct: 116 LERSLD-GVDYQPWQYYAITDSECLTRYNIHPRPGTPSYMKDDEVICTSYYSK 167
Score = 111 (44.1 bits), Expect = 1.4e-09, Sum P(2) = 1.4e-09
Identities = 30/112 (26%), Positives = 42/112 (37%)
Query: 202 CKCNGHASRCIKSPQGELVCECRHNTAGKDCEKCKPFFSDRPWGRATVYDANECKGGRCK 261
C CN S+ G C C+ GK C++C F + ++ C C
Sbjct: 930 CNCNSFGSKSFDC-DGNGQCYCQPGVTGKKCDRCAHGFYN--------FEEGGCTP--CA 978
Query: 262 CNGHASRCIKSPQGALVCECRHNTAGKDCEKCKPFFSDRPWGRATVYDANEC 313
C+ + C P C C NT G+ C+KC P WG V+ C
Sbjct: 979 CSQFGNNC--DPVSGR-CICPPNTIGEMCDKCAP----NHWGHDIVHGCKPC 1023
Score = 100 (40.3 bits), Expect = 1.9e-08, Sum P(2) = 1.9e-08
Identities = 30/107 (28%), Positives = 42/107 (39%)
Query: 197 KQGG--RCKCNGHASRCIKSPQGELVCECRHNTAGKDCEKCKPFFSDRPWGRATVYDANE 254
++GG C C+ + C G C C NT G+ C+KC P WG V+
Sbjct: 970 EEGGCTPCACSQFGNNC-DPVSGR--CICPPNTIGEMCDKCAP----NHWGHDIVHGCKP 1022
Query: 255 CKGGRCKCNGHASRCIKSPQGALVCECRHNTAGKDCEKCKPFFSDRP 301
C C G S G C CR +G C +C+ + + P
Sbjct: 1023 CD---CSLIGALSAQCDLNTGC--CFCRPEFSGDKCTECRSGYWNYP 1064
Score = 92 (37.4 bits), Expect = 1.2e-07, Sum P(2) = 1.2e-07
Identities = 27/107 (25%), Positives = 49/107 (45%)
Query: 202 CKCNGHAS---RCIKSP---QGELV---CECRHNTAGKDCEKCKPFFSDRPWGRATVYDA 252
C C+ + S C+K +G+++ C C+ AG+ C +C ++ P
Sbjct: 376 CSCDPNGSLHETCVKDEKHAEGDMLPGFCHCKTGYAGEHCSRCALGYTGYP--------- 426
Query: 253 NECKGGRCKCNGHASRCIKSPQGALVCECRHNTAGKDCEKCKP-FFS 298
+C C C+ S I G +C C+ + G++C++CK FF+
Sbjct: 427 -DCLP--CNCSVEGSANIDPCVG--LCVCKEHVEGENCDRCKSGFFN 468
Score = 83 (34.3 bits), Expect = 1.0e-06, Sum P(2) = 1.0e-06
Identities = 21/91 (23%), Positives = 35/91 (38%)
Query: 205 NGHASRCIKSPQGELVCE-CRHNTAGKDCEKCKPFFSDRPWGRATVYDANECKGGRCKCN 263
N + C+ + C C G+ CE+C P ++ P T C+ C+C+
Sbjct: 1443 NNFSPSCVVEGPSDYRCTACPPGYEGQYCERCSPGYTGNP---QT--PGGSCQ--ECECD 1495
Query: 264 GHASRCIKSPQGALVCECRHNTAGKDCEKCK 294
+ S + VC C+ G C C+
Sbjct: 1496 QYGSMPVPCDPATGVCTCKPGFTGWKCAGCE 1526
Score = 82 (33.9 bits), Expect = 1.3e-06, Sum P(2) = 1.3e-06
Identities = 26/91 (28%), Positives = 42/91 (46%)
Query: 220 VC-ECRHNTAGKDCEKCKPFFSDRPWGRATVYDANE-CKGGRCKCNGHASR-CIKSP--- 273
VC C +T G +CE C + RP G + D+ + C+ C NG C+K
Sbjct: 339 VCVNCTSHTDGINCETCVDGYF-RPKG--VLPDSPDPCQPCSCDPNGSLHETCVKDEKHA 395
Query: 274 QGALV---CECRHNTAGKDCEKCKPFFSDRP 301
+G ++ C C+ AG+ C +C ++ P
Sbjct: 396 EGDMLPGFCHCKTGYAGEHCSRCALGYTGYP 426
Score = 59 (25.8 bits), Expect = 0.00029, Sum P(2) = 0.00029
Identities = 12/32 (37%), Positives = 16/32 (50%)
Query: 272 SPQGALV--CECRHNTAGKDCEKCKPFFSDRP 301
+PQ L+ C+C +G CE C P F P
Sbjct: 1336 TPQANLIEQCDCPLGYSGLSCESCSPGFYRLP 1367
Score = 55 (24.4 bits), Expect = 0.00075, Sum P(2) = 0.00075
Identities = 14/56 (25%), Positives = 24/56 (42%)
Query: 202 CKCNGHASRCIKSPQGELVCECRHNTAGKDCEKCKPFFSDRPWGRATVYDANECKG 257
C+C+ + S + VC C+ G C C+ ++ R G + +EC G
Sbjct: 1492 CECDQYGSMPVPCDPATGVCTCKPGFTGWKCAGCEHRYA-RD-GMKCISCDDECTG 1545
Score = 46 (21.3 bits), Expect = 8.1e-06, Sum P(2) = 8.1e-06
Identities = 8/15 (53%), Positives = 12/15 (80%)
Query: 65 CDT-SGACHVCDAGS 78
CD+ SGAC +C +G+
Sbjct: 842 CDSLSGACLICKSGT 856
>UNIPROTKB|F1MEG3 [details] [associations]
symbol:LAMA1 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0061304 "retinal blood vessel morphogenesis"
evidence=IEA] [GO:0060445 "branching involved in salivary gland
morphogenesis" evidence=IEA] [GO:0060441 "epithelial tube branching
involved in lung morphogenesis" evidence=IEA] [GO:0045198
"establishment of epithelial cell apical/basal polarity"
evidence=IEA] [GO:0043208 "glycosphingolipid binding" evidence=IEA]
[GO:0031175 "neuron projection development" evidence=IEA]
[GO:0007166 "cell surface receptor signaling pathway" evidence=IEA]
[GO:0005911 "cell-cell junction" evidence=IEA] [GO:0005615
"extracellular space" evidence=IEA] [GO:0005608 "laminin-3 complex"
evidence=IEA] [GO:0005606 "laminin-1 complex" evidence=IEA]
[GO:0005201 "extracellular matrix structural constituent"
evidence=IEA] [GO:0002011 "morphogenesis of an epithelial sheet"
evidence=IEA] [GO:0045995 "regulation of embryonic development"
evidence=IEA] [GO:0030334 "regulation of cell migration"
evidence=IEA] [GO:0030155 "regulation of cell adhesion"
evidence=IEA] [GO:0007155 "cell adhesion" evidence=IEA] [GO:0005102
"receptor binding" evidence=IEA] InterPro:IPR009254
InterPro:IPR010307 Pfam:PF06008 Pfam:PF06009 GO:GO:0005615
GO:GO:0030155 GO:GO:0007155 GO:GO:0005911 Gene3D:2.60.120.200
InterPro:IPR008985 InterPro:IPR013320 SUPFAM:SSF49899 GO:GO:0030334
GO:GO:0007166 InterPro:IPR002049 InterPro:IPR001791 Pfam:PF00053
Pfam:PF00054 SMART:SM00180 SMART:SM00282 PROSITE:PS01248
PROSITE:PS50027 PROSITE:PS50025 GO:GO:0031175 GO:GO:0060441
GO:GO:0060445 GO:GO:0045198 GO:GO:0045995 GO:GO:0005201
GO:GO:0043208 GO:GO:0002011 GeneTree:ENSGT00700000104140
InterPro:IPR018031 InterPro:IPR000034 InterPro:IPR008211
Pfam:PF00052 Pfam:PF00055 SMART:SM00281 SMART:SM00136
PROSITE:PS51115 PROSITE:PS51117 GO:GO:0061304 OMA:EPFYWRL
GO:GO:0005606 GO:GO:0005608 EMBL:DAAA02056788 EMBL:DAAA02056789
EMBL:DAAA02056790 EMBL:DAAA02056791 EMBL:DAAA02056792
IPI:IPI01000434 Ensembl:ENSBTAT00000024169 Uniprot:F1MEG3
Length = 3031
Score = 174 (66.3 bits), Expect = 1.2e-16, Sum P(2) = 1.2e-16
Identities = 44/134 (32%), Positives = 59/134 (44%)
Query: 199 GGRCKCNGHASRCIKSPQG--ELVCECRHNTAGKDCEKCKPFFSDRPWGRATVYDANECK 256
GG C C GHAS C +G + C+C HNT G C +C P + +PW TV N C+
Sbjct: 268 GGMCICYGHASSC-PWDEGTKKFQCQCEHNTCGDRCNRCCPGYHQQPWRPGTVSSGNTCE 326
Query: 257 GGRCKCNGHASRCIKSP---------------QGALVC-ECRHNTAGKDCEKCKPFFSDR 300
C C+ A C +G VC C NT G +CE C + R
Sbjct: 327 --ECNCHNKAKDCYYDEDVANQRRSLNIAGQFRGGGVCIGCLQNTMGVNCETCVDGYY-R 383
Query: 301 PWGRATVYDANECK 314
P G + Y+ + C+
Sbjct: 384 PHG-VSPYEDHPCR 396
Score = 141 (54.7 bits), Expect = 8.2e-13, Sum P(2) = 8.2e-13
Identities = 36/94 (38%), Positives = 45/94 (47%)
Query: 221 CECRHNTAGKDCEKCKPFFSDRPWGRATVYDANECKGGRCKCNGHASRCIKSPQGALVC- 279
CEC AG CE C P + R G + C+ C+C+GHA+ C G VC
Sbjct: 664 CECPQGYAGISCESCLPGYY-RVDG---ILFGGICQP--CECHGHAAEC--DVHG--VCF 713
Query: 280 ECRHNTAGKDCEKCKPFFSDRPWGRATVYDANEC 313
C+HNT G+ CE+C P F P R T D C
Sbjct: 714 ACQHNTTGEHCERCLPGFYGLP-SRGTPGDCQPC 746
Score = 136 (52.9 bits), Expect = 3.0e-12, Sum P(2) = 3.0e-12
Identities = 37/109 (33%), Positives = 49/109 (44%)
Query: 202 CKCNGHASRCIKSPQGELVC-ECRHNTAGKDCEKCKPFFSDRPWGRATVYDANECKGGRC 260
C+C+GHA+ C G VC C+HNT G+ CE+C P F P R T D C
Sbjct: 697 CECHGHAAEC--DVHG--VCFACQHNTTGEHCERCLPGFYGLP-SRGTPGDCQPCACPLS 751
Query: 261 KC-NGHASRCIKSPQGALVCE-CRHNTAGKDCEKCKPFFSDRPWGRATV 307
N + C +VC+ C G CE+C +D +G TV
Sbjct: 752 TASNNFSPTCHLDDGDEVVCDQCAPGYMGDWCERC----ADGYYGNPTV 796
Score = 118 (46.6 bits), Expect = 3.2e-10, Sum P(2) = 3.2e-10
Identities = 27/101 (26%), Positives = 40/101 (39%)
Query: 202 CKCNGHASRCIKSPQGELVCECRHNTAGKDCEKCKPFFSDRPWGRATVYDANECKGGRCK 261
C CN H+ C P+ C HNT G C+ C P + + G A+ D + C
Sbjct: 1357 CNCNNHSDTC--DPETGKCLNCGHNTTGDHCDTCAPGYYGKVTGSAS--DCSPCTCPHSL 1412
Query: 262 CNGHASRCIKSPQGALVCE-CRHNTAGKDCEKCKPFFSDRP 301
++ CI C+ C G+ CE+C + P
Sbjct: 1413 PASYSPTCILEGDHDFRCDACFVGYEGQYCERCSSGYYGNP 1453
Score = 117 (46.2 bits), Expect = 1.2e-16, Sum P(2) = 1.2e-16
Identities = 40/173 (23%), Positives = 75/173 (43%)
Query: 39 PDFVNAAFGQEVKVNSVCGLESPERYCDT----------SGACHVCDAGSPRGRFPAEYL 88
P +N A + N+ CG + PE YC + C VCD S + +
Sbjct: 24 PAILNLASNAHISTNATCGEKGPETYCKLVEHVPGRAMRNAQCRVCDGSSANPKAERHPI 83
Query: 89 TDLNNPSNVTCWRSEAQTSVNSLSASPDNVTLTLSLGKKFELTYISLSFCPKSIKPDSLA 148
++ + +N W+S S+ + VT+TL L + F++ Y+ + + +P +
Sbjct: 84 SNAIDGTN-NWWQSP---SIQN-GREYHWVTITLDLRQVFQVAYVIIK-AANAPRPGNWI 137
Query: 149 IYKSQDFGKSWQPLQFYS---SQCKKLYGRTAT-GVISRGNEQEALCTDRHKK 197
+ +S D G + P Q+Y+ ++C Y T G + + E +CT + +
Sbjct: 138 LERSVD-GVKFSPWQYYAVSDTECLTHYNITPRRGPPTYRADDEVICTSYYSR 189
Score = 116 (45.9 bits), Expect = 5.2e-10, Sum P(2) = 5.2e-10
Identities = 28/95 (29%), Positives = 37/95 (38%)
Query: 221 CECRHNTAGKDCEKCKPFF--SDRPWGRATVYDANECKGGRCKCNGHASRCIKSPQGALV 278
C C TAG C+ C P + P G C CN H+ C P+
Sbjct: 1316 CVCPPGTAGLSCQDCAPGYHRGKLPEGDGRRPRPLLAPCVPCNCNNHSDTC--DPETGKC 1373
Query: 279 CECRHNTAGKDCEKCKPFFSDRPWGRATVYDANEC 313
C HNT G C+ C P + + G A+ D + C
Sbjct: 1374 LNCGHNTTGDHCDTCAPGYYGKVTGSAS--DCSPC 1406
Score = 113 (44.8 bits), Expect = 1.1e-09, Sum P(2) = 1.1e-09
Identities = 31/98 (31%), Positives = 46/98 (46%)
Query: 202 CKCNGHAS-----RCIKSPQGELVCECRHNTAGKDCEKCKPFFSDRPWGRATVYDANECK 256
C C+G+ C S GE + C NT G CE+C F +G A A C+
Sbjct: 804 CNCSGNVDLLEPGSC-DSVTGECL-RCLGNTDGPHCERCADGF----YGDAVT--AKNCR 855
Query: 257 GGRCKCNGHAS-RCIKSPQGALVCECRHNTAGKDCEKC 293
C+C+G S + P+ L CEC+ + G+ C++C
Sbjct: 856 A--CECHGQGSLSAVCHPETGL-CECKPHVTGQRCDQC 890
Score = 104 (41.7 bits), Expect = 8.9e-09, Sum P(2) = 8.9e-09
Identities = 30/106 (28%), Positives = 40/106 (37%)
Query: 197 KQGGRCKCN-GHASRCIKSPQGELVCECRHNTAGKDCEKCKPFFSDRPWGRATVYDANEC 255
+ GG C+ H GE C C +T G CE+C +D WG C
Sbjct: 945 QDGGCTPCDCAHTQNTCDPETGE--CVCPPHTRGAACEEC----ADGHWGHDLELGCQAC 998
Query: 256 KGGRCKCNGHASRCIKSPQGALVCECRHNTAGKDCEKCKPFFSDRP 301
C G AS+ G C C+ G+ CE+C P + P
Sbjct: 999 N---CSSVGAASQRCDVVTGH--CRCKPAFGGRTCEQCSPGYKGFP 1039
Score = 100 (40.3 bits), Expect = 2.3e-08, Sum P(2) = 2.3e-08
Identities = 39/130 (30%), Positives = 53/130 (40%)
Query: 179 GVISRGNE-QEALCTDRHKK-QGGRCKCNGHASRCIKSP-QGELVC-ECRHNTAGKDCEK 234
G +S GN +E C ++ K N S I +G VC C NT G +CE
Sbjct: 317 GTVSSGNTCEECNCHNKAKDCYYDEDVANQRRSLNIAGQFRGGGVCIGCLQNTMGVNCET 376
Query: 235 CKPFFSDRPWGRATVYDANECKGGRCKCNGHA-SRCIKSP------QGALVCECRHNTAG 287
C + RP G + Y+ + C+ C G S CIK +G N G
Sbjct: 377 CVDGYY-RPHG-VSPYEDHPCRPCDCDPVGSLNSVCIKDDLHSDLHRGTCFISVLENVEG 434
Query: 288 KDCEKCKPFF 297
C++CKP F
Sbjct: 435 SHCDRCKPGF 444
Score = 99 (39.9 bits), Expect = 2.9e-08, Sum P(2) = 2.9e-08
Identities = 28/104 (26%), Positives = 48/104 (46%)
Query: 202 CKCNGHAS-RCIKSPQGELVCECRHNTAGKDCEKCKPFFSDRPWGRATVYDANECKGGRC 260
C+C+G S + P+ L CEC+ + G+ C++C + +G T C C
Sbjct: 857 CECHGQGSLSAVCHPETGL-CECKPHVTGQRCDQCLYGY----YGLETGLGCLPCN---C 908
Query: 261 KCNGHASRCIKSPQGALVCECRHNTAGKDCEKC-KPFFSDRPWG 303
+ C +P+G C C AG+ C++C + F+S + G
Sbjct: 909 SAGSLSDDC--TPEGH--CLCVPGVAGEKCDRCARGFYSYQDGG 948
Score = 89 (36.4 bits), Expect = 3.1e-07, Sum P(2) = 3.1e-07
Identities = 28/100 (28%), Positives = 41/100 (41%)
Query: 205 NGHASRCIKSPQGELVCE-CRHNTAGKDCEKCKPFFSDRPWGRATVYDANECKGGRCKCN 263
N + C E+VC+ C G CE+C +D +G TV + C C C+
Sbjct: 755 NNFSPTCHLDDGDEVVCDQCAPGYMGDWCERC----ADGYYGNPTV-PGDSCVA--CNCS 807
Query: 264 GHASRCIKSPQGALVCECRH---NTAGKDCEKCKP-FFSD 299
G+ ++ EC NT G CE+C F+ D
Sbjct: 808 GNVDLLEPGSCDSVTGECLRCLGNTDGPHCERCADGFYGD 847
Score = 86 (35.3 bits), Expect = 6.3e-07, Sum P(2) = 6.3e-07
Identities = 24/90 (26%), Positives = 37/90 (41%)
Query: 207 HASRCIKSPQGELVCE-CRHNTAGKDCEKCKPFFSDRPWGRATVYDANECKGGRCKCNGH 265
++ CI + C+ C G+ CE+C + P R + C+ RC C+ H
Sbjct: 1416 YSPTCILEGDHDFRCDACFVGYEGQYCERCSSGYYGNP--RMP---GSTCQ--RCDCSPH 1468
Query: 266 ASRCIKSPQGALVCECRHNTAGKDCEKCKP 295
S +G+ C CR G C C+P
Sbjct: 1469 GSVHSDCDRGSGQCICRPGATGLRCGDCEP 1498
Score = 83 (34.3 bits), Expect = 1.3e-06, Sum P(2) = 1.3e-06
Identities = 26/93 (27%), Positives = 40/93 (43%)
Query: 202 CKCNGHASRCIKSPQGELVCECRHNTAGKDCEKC-KPFFSDRPWGRATVYDANECKGGRC 260
C C+ + +P+G C C AG+ C++C + F+S + G T D C +
Sbjct: 906 CNCSAGSLSDDCTPEGH--CLCVPGVAGEKCDRCARGFYSYQDGG-CTPCD---CAHTQN 959
Query: 261 KCNGHASRCIKSP--QGALVCECRHNTAGKDCE 291
C+ C+ P +GA EC G D E
Sbjct: 960 TCDPETGECVCPPHTRGAACEECADGHWGHDLE 992
Score = 66 (28.3 bits), Expect = 7.0e-05, Sum P(2) = 7.0e-05
Identities = 13/37 (35%), Positives = 16/37 (43%)
Query: 201 RCKCNGHASRCIKSPQGELVCECRHNTAGKDCEKCKP 237
RC C+ H S +G C CR G C C+P
Sbjct: 1462 RCDCSPHGSVHSDCDRGSGQCICRPGATGLRCGDCEP 1498
>RGD|1565197 [details] [associations]
symbol:Ntn5 "netrin 5" species:10116 "Rattus norvegicus"
[GO:0005576 "extracellular region" evidence=IEA] InterPro:IPR001134
PROSITE:PS50189 RGD:1565197 GO:GO:0005576 InterPro:IPR002049
InterPro:IPR008993 Pfam:PF00053 SMART:SM00180 SUPFAM:SSF50242
PROSITE:PS01248 PROSITE:PS50027 InterPro:IPR018933 Pfam:PF01759
SMART:SM00643 GeneTree:ENSGT00700000104042 OrthoDB:EOG402WS1
IPI:IPI00367517 Ensembl:ENSRNOT00000028524 UCSC:RGD:1565197
Uniprot:D3ZT86
Length = 448
Score = 222 (83.2 bits), Expect = 1.3e-16, P = 1.3e-16
Identities = 77/245 (31%), Positives = 102/245 (41%)
Query: 67 TSGACHVCDAGSPRGRFPAEYLTDLNNPSNVTCWRSEAQTSVNSLSA-SPD---NVTLTL 122
TS C+ D G R RF +T L + C +QT +L A SPD N TLTL
Sbjct: 33 TSDPCY--DPGG-RPRFCLPPVTQLVGKAAAPC----SQTC--ALPADSPDPVCNGTLTL 83
Query: 123 SLGKKFELTYISLSFCPKSIKPDSLAIYKSQDFGKSWQPLQFYSSQCKKLYG-RTATGVI 181
L F LT ++L FC P +L + + G W+PL + L G + T
Sbjct: 84 DLDGSFLLTSVTLRFCTAG--PPALVLSAAWAIGGPWRPLWRRPAWPGVLGGPKKVTFHS 141
Query: 182 SRGNEQEALCT----DRHKKQG-------GRCKCNGHASRCIKSPQGELVCECRHNTAGK 230
G + + + + K G GRC+C+GHA+RC Q C CRH+T G
Sbjct: 142 PPGPKTRIVASYLRVELGGKAGLVTTGVRGRCQCHGHAARCAARAQPPR-CRCRHHTTGP 200
Query: 231 DCEKCKPFFSDRPWGRATVYDANECKGGRCKCNGHASRCIKSPQGALVCECRHNTAGKDC 290
CE C+P D PW AT + C +C G G C C+ G C
Sbjct: 201 GCESCRPSHRDWPWRPATPQHPHPCLPCQCHPIGATGGMCNQTSGQ--CSCKLGVTGLTC 258
Query: 291 EKCKP 295
C P
Sbjct: 259 NHCGP 263
Score = 150 (57.9 bits), Expect = 7.6e-08, P = 7.6e-08
Identities = 26/56 (46%), Positives = 32/56 (57%)
Query: 258 GRCKCNGHASRCIKSPQGALVCECRHNTAGKDCEKCKPFFSDRPWGRATVYDANEC 313
GRC+C+GHA+RC Q C CRH+T G CE C+P D PW AT + C
Sbjct: 171 GRCQCHGHAARCAARAQPPR-CRCRHHTTGPGCESCRPSHRDWPWRPATPQHPHPC 225
>UNIPROTKB|F1N805 [details] [associations]
symbol:LOC416036 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0005576 "extracellular region" evidence=IEA]
InterPro:IPR001134 PROSITE:PS50189 GO:GO:0005576 InterPro:IPR013032
PROSITE:PS00022 InterPro:IPR002049 InterPro:IPR008993 Pfam:PF00053
SMART:SM00180 SUPFAM:SSF50242 PROSITE:PS01248 PROSITE:PS50027
InterPro:IPR018933 Pfam:PF01759 InterPro:IPR008211 Pfam:PF00055
SMART:SM00136 PROSITE:PS51117 GeneTree:ENSGT00700000104042
EMBL:AADN02014130 EMBL:AADN02014129 IPI:IPI00818986
ProteinModelPortal:F1N805 Ensembl:ENSGALT00000036243
ArrayExpress:F1N805 Uniprot:F1N805
Length = 560
Score = 223 (83.6 bits), Expect = 1.5e-16, P = 1.5e-16
Identities = 53/142 (37%), Positives = 68/142 (47%)
Query: 200 GRCKCNGHASRC-------------IKSPQGELVCECRHNTAGKDCEKCKPFFSDRPW-- 244
G C CNGHA C +K Q C CRHNTAG CEKC P ++D+PW
Sbjct: 205 GSCFCNGHAEECELANRTAYNSASYVKH-QVHGKCVCRHNTAGDHCEKCAPLYNDQPWKP 263
Query: 245 GRATVYDANECKGGRCKCNGHASRC--------IKSPQGALVCE-CRHNTAGKDCEKCKP 295
G NECK +C+C+ HA C + VC+ C+HNT G C++CKP
Sbjct: 264 GDGKTGAPNECK--KCRCHNHADSCHFDLSVWLASGKRSGGVCDNCKHNTEGHRCQRCKP 321
Query: 296 -FFSDR--PWGRATVYDANECK 314
++ DR P A V C+
Sbjct: 322 GYYRDRGKPMSSAEVCKPCSCQ 343
Score = 221 (82.9 bits), Expect = 3.1e-16, P = 3.1e-16
Identities = 88/303 (29%), Positives = 128/303 (42%)
Query: 35 RRCIPDFVNAAFGQEVKVNSVCGLESPERYC---DTS-------GA----CHVCDAGSP- 79
R C P N A G+ + CG S E YC D S G C C+A P
Sbjct: 4 RSCNPPVGNLATGRTPITLTTCGQNSTELYCSYPDQSLLHPASHGCGQPRCTKCNANQPD 63
Query: 80 RGRFPAEYLTDL-NNPSNVTCWRSEAQTSVNSLSASPDNVTLTLSLGKKFELTYISLSFC 138
PA+ D NP V+ W+S AQ V+ + L +F LT++ F
Sbjct: 64 NSHLPADMTDDFFANP--VSWWQS-AQ-GVH-------REEIRLDFETEFYLTHVIAVF- 111
Query: 139 PKSIKPDSLAIYKSQDFGKSWQPLQFYSSQCKKLYGRTAT-GVISRGNEQEALCTDRHKK 197
KS +P ++ + +SQD+G++W+P +++S C TAT G+ E+ ++CT R+
Sbjct: 112 -KSPRPAAMVLERSQDYGQTWRPYKYFSVNC------TATFGLQDDLTEEGSMCTSRYSD 164
Query: 198 QGGRCKCNGHASRCIKSPQGELV-CECRHNTAGKDCEKCKPFFSDRPWGRATVY---DAN 253
A C + + E C CR + ++ + R + + A
Sbjct: 165 ----------AVPCTRGEESERQECPCRGLGLVEKPQRFAHYAIYDLIIRGSCFCNGHAE 214
Query: 254 ECKGGRCKCNGHASRCIKSPQGALVCECRHNTAGKDCEKCKPFFSDRPW--GRATVYDAN 311
EC+ AS G C CRHNTAG CEKC P ++D+PW G N
Sbjct: 215 ECELANRTAYNSASYVKHQVHGK--CVCRHNTAGDHCEKCAPLYNDQPWKPGDGKTGAPN 272
Query: 312 ECK 314
ECK
Sbjct: 273 ECK 275
Score = 133 (51.9 bits), Expect = 9.0e-06, P = 9.0e-06
Identities = 34/107 (31%), Positives = 53/107 (49%)
Query: 201 RCKCNGHASRC-----IKSPQGEL---VCE-CRHNTAGKDCEKCKP-FFSDRPWGRATVY 250
+C+C+ HA C + G+ VC+ C+HNT G C++CKP ++ DR G+ +
Sbjct: 276 KCRCHNHADSCHFDLSVWLASGKRSGGVCDNCKHNTEGHRCQRCKPGYYRDR--GKP-MS 332
Query: 251 DANECKGGRCKCNGHA----SRCIKSPQGALVCECRHNTAGKDCEKC 293
A CK C+ G A SR + C C+ AG +C++C
Sbjct: 333 SAEVCKPCSCQPMGSANATFSRSWRCHPKTGFCYCKPGVAGPNCDRC 379
>MGI|MGI:2685330 [details] [associations]
symbol:Ntn5 "netrin 5" species:10090 "Mus musculus"
[GO:0003674 "molecular_function" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0005576 "extracellular
region" evidence=IEA] [GO:0008150 "biological_process" evidence=ND]
InterPro:IPR001134 PROSITE:PS50189 MGI:MGI:2685330 GO:GO:0005576
InterPro:IPR013032 PROSITE:PS00022 PROSITE:PS01186
InterPro:IPR002049 InterPro:IPR008993 Pfam:PF00053 SMART:SM00180
SUPFAM:SSF50242 PROSITE:PS01248 PROSITE:PS50027 InterPro:IPR018933
Pfam:PF01759 SMART:SM00643 EMBL:AC167242 HOGENOM:HOG000286017
GeneTree:ENSGT00700000104042 CTD:126147 eggNOG:NOG327968
HOVERGEN:HBG096704 OMA:GGPFLLT OrthoDB:EOG402WS1 EMBL:AK142898
EMBL:BC150901 IPI:IPI00876295 IPI:IPI00923643 RefSeq:NP_001028528.2
UniGene:Mm.291240 ProteinModelPortal:Q3UQ22 SMR:Q3UQ22 PRIDE:Q3UQ22
Ensembl:ENSMUST00000107742 GeneID:243967 KEGG:mmu:243967
InParanoid:Q3UQ22 NextBio:386070 CleanEx:MM_GM484
Genevestigator:Q3UQ22 Uniprot:Q3UQ22
Length = 452
Score = 219 (82.2 bits), Expect = 3.6e-16, P = 3.6e-16
Identities = 73/243 (30%), Positives = 102/243 (41%)
Query: 67 TSGACHVCDAGSPRGRFPAEYLTDLNNPSNVTCWRSEAQT-SVNSLSASPD-NVTLTLSL 124
TS C+ D G R RF +T L + C +QT ++ + S P N +LTL L
Sbjct: 33 TSDPCY--DPGG-RPRFCLPPVTQLVGKAAAPC----SQTCALPAASPGPACNSSLTLDL 85
Query: 125 GKKFELTYISLSFCPKSIKPDSLAIYKSQDFGKSWQPLQFYSSQCKKLYG-RTATGVISR 183
F LT ++L FC P +L + + G W+PL + L G + T
Sbjct: 86 DGSFLLTSVTLRFCTAG--PPALVLSAAWATGGPWRPLWRRPAWPGALGGPKKVTFHSPP 143
Query: 184 GNEQEALCT----DRHKKQG-------GRCKCNGHASRCIKSPQGELVCECRHNTAGKDC 232
G + + + + K G GRC+C+GHA+RC Q C CRH+T G C
Sbjct: 144 GPKTRIVASYLRVEFGGKAGLVTTGVRGRCQCHGHAARCATRAQPPR-CRCRHHTTGPGC 202
Query: 233 EKCKPFFSDRPWGRATVYDANECKGGRCKCNGHASRCIKSPQGALVCECRHNTAGKDCEK 292
E C+P D PW AT + C +C G G C C+ G C +
Sbjct: 203 ESCRPSHRDWPWRPATPQHPHPCLPCQCHPIGATGGMCNQTSGQ--CSCKLGVTGLTCNR 260
Query: 293 CKP 295
C P
Sbjct: 261 CGP 263
Score = 150 (57.9 bits), Expect = 7.7e-08, P = 7.7e-08
Identities = 26/56 (46%), Positives = 32/56 (57%)
Query: 258 GRCKCNGHASRCIKSPQGALVCECRHNTAGKDCEKCKPFFSDRPWGRATVYDANEC 313
GRC+C+GHA+RC Q C CRH+T G CE C+P D PW AT + C
Sbjct: 171 GRCQCHGHAARCATRAQPPR-CRCRHHTTGPGCESCRPSHRDWPWRPATPQHPHPC 225
>RGD|628777 [details] [associations]
symbol:Ush2a "Usher syndrome 2A (autosomal recessive, mild)"
species:10116 "Rattus norvegicus" [GO:0002142 "stereocilia ankle
link complex" evidence=ISO] [GO:0005518 "collagen binding"
evidence=ISO] [GO:0005578 "proteinaceous extracellular matrix"
evidence=NAS] [GO:0005604 "basement membrane" evidence=ISO]
[GO:0005737 "cytoplasm" evidence=ISO] [GO:0007601 "visual
perception" evidence=IEA] [GO:0007605 "sensory perception of sound"
evidence=IEA;ISO] [GO:0016324 "apical plasma membrane"
evidence=ISO] [GO:0017022 "myosin binding" evidence=ISO]
[GO:0032421 "stereocilium bundle" evidence=ISO] [GO:0045494
"photoreceptor cell maintenance" evidence=ISO] [GO:0048496
"maintenance of organ identity" evidence=ISO] [GO:0050896 "response
to stimulus" evidence=IEA] [GO:0050953 "sensory perception of light
stimulus" evidence=ISO] [GO:0060113 "inner ear receptor cell
differentiation" evidence=ISO] [GO:0060171 "stereocilium membrane"
evidence=ISO] [GO:0001917 "photoreceptor inner segment"
evidence=IDA] [GO:0032391 "photoreceptor connecting cilium"
evidence=IDA] [GO:0043025 "neuronal cell body" evidence=IDA]
InterPro:IPR003961 Pfam:PF00041 PROSITE:PS50853 SMART:SM00060
RGD:628777 Gene3D:2.60.40.10 InterPro:IPR013783 GO:GO:0007601
SUPFAM:SSF49265 GO:GO:0005578 GO:GO:0050896 PROSITE:PS00022
Gene3D:2.60.120.200 InterPro:IPR008985 InterPro:IPR013320
SUPFAM:SSF49899 GO:GO:0007605 InterPro:IPR002049 Pfam:PF00053
SMART:SM00180 PROSITE:PS01248 PROSITE:PS50027 InterPro:IPR008211
Pfam:PF00055 SMART:SM00136 PROSITE:PS51117 CTD:7399
eggNOG:NOG245744 InterPro:IPR026915 PANTHER:PTHR10574:SF53
EMBL:AY077844 IPI:IPI00202312 RefSeq:NP_001231686.1
RefSeq:NP_742045.2 UniGene:Rn.200477 ProteinModelPortal:Q8K3K1
STRING:Q8K3K1 PhosphoSite:Q8K3K1 PRIDE:Q8K3K1 GeneID:289369
KEGG:rno:289369 UCSC:RGD:628777 NextBio:629723
Genevestigator:Q8K3K1 Uniprot:Q8K3K1
Length = 1512
Score = 196 (74.1 bits), Expect = 7.3e-16, Sum P(2) = 7.3e-16
Identities = 45/128 (35%), Positives = 65/128 (50%)
Query: 200 GRCKCNGHASRCIKSPQG-ELVCECRHNTAGKDCEKCKPFFSDRPWGRATVYDANECKGG 258
GRC+C+GHA C ++ + +C T G C +C P ++D+P+ A CK
Sbjct: 512 GRCQCHGHAETCDRTRRPYRCLCSPHSFTEGPQCGRCSPLYNDKPFRSGNKVHAFNCKP- 570
Query: 259 RCKCNGHASRC----IKSP-------QGALVCE-CRHNTAGKDCEKCKPFFSDRPWGRAT 306
C+C+GHAS C P G VC+ C+H+T G++CE C+ +F RP G A
Sbjct: 571 -CQCHGHASSCHYDASMDPFPLEYNRGGGGVCDDCQHHTTGRNCESCQDYFY-RPIG-AD 627
Query: 307 VYDANECK 314
D CK
Sbjct: 628 PADPEVCK 635
Score = 134 (52.2 bits), Expect = 1.6e-08, Sum P(2) = 1.6e-08
Identities = 38/107 (35%), Positives = 53/107 (49%)
Query: 202 CKCNGHASRC----IKSP-------QGELVCE-CRHNTAGKDCEKCKPFFSDRPWGRATV 249
C+C+GHAS C P G VC+ C+H+T G++CE C+ +F RP G A
Sbjct: 571 CQCHGHASSCHYDASMDPFPLEYNRGGGGVCDDCQHHTTGRNCESCQDYFY-RPIG-ADP 628
Query: 250 YDANECKGGRCKCNGHASRCIKSPQGALV---CECRHNTAGKDCEKC 293
D CK C CN +R S LV C+C+ +G+ C +C
Sbjct: 629 ADPEVCK--HCDCNRDGTRN-GSLLCDLVGDQCDCKRRVSGRRCFRC 672
Score = 107 (42.7 bits), Expect = 1.5e-05, Sum P(2) = 1.5e-05
Identities = 32/113 (28%), Positives = 44/113 (38%)
Query: 202 CKCN--GHASRCIKSPQGELVCECRHNTAGKDCEKCKPFFSDRPWGRATVYDANECKGGR 259
C CN G I C C+ N G C++C F + R+ +A+ C+
Sbjct: 690 CDCNPSGTVDGDITCHHNSGQCSCKANVIGLRCDRCSFGFK---FLRSL--NADGCEP-- 742
Query: 260 CKCNGHAS-RCIKSPQGALVCECRHNTAGKDCEKCKPFFSDRPWGRATVYDAN 311
C CN H S + P C C+ G C+ C+ F PW V D N
Sbjct: 743 CHCNLHGSVNQLCDPLSGQ-CVCKKEAKGLRCDVCRENFYGLPWSACEVCDCN 794
Score = 77 (32.2 bits), Expect = 7.3e-16, Sum P(2) = 7.3e-16
Identities = 27/131 (20%), Positives = 56/131 (42%)
Query: 60 SPERYCDTSGACHVCDAGSPRGRFPAEYLTDLNNPSNVTCWRSEAQTSVNSLSASPDNVT 119
S ++YC +G R A L+ +N+ T W S T + L+ ++
Sbjct: 310 SVQQYCIPNGVEDTLQHRVSRLNPEAHPLSFINDDDVATSWISHVFTDITQLNQGVA-IS 368
Query: 120 LTLSLGKKFELTYISLSFCPKSIKPDSLAIYKSQDFGKSWQPLQFYSSQCKKLYGRTATG 179
+ L G+ +++ I++ F S +P ++ I + + W+ Q+++ C ++G G
Sbjct: 369 IDLENGQ-YQVFQITIRF--SSPQPVAMRIQRKKADKSLWEDWQYFARNCS-VWGMKNNG 424
Query: 180 VISRGNEQEAL 190
+ N L
Sbjct: 425 DLENPNSVNCL 435
>UNIPROTKB|F1PJ02 [details] [associations]
symbol:LAMA1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0045995 "regulation of embryonic development"
evidence=IEA] [GO:0030334 "regulation of cell migration"
evidence=IEA] [GO:0030155 "regulation of cell adhesion"
evidence=IEA] [GO:0007155 "cell adhesion" evidence=IEA] [GO:0005606
"laminin-1 complex" evidence=IEA] [GO:0005102 "receptor binding"
evidence=IEA] InterPro:IPR009254 InterPro:IPR010307 Pfam:PF06008
Pfam:PF06009 GO:GO:0030155 GO:GO:0007155 Gene3D:2.60.120.200
InterPro:IPR008985 InterPro:IPR013320 SUPFAM:SSF49899 GO:GO:0030334
InterPro:IPR008979 SUPFAM:SSF49785 InterPro:IPR002049
InterPro:IPR001791 Pfam:PF00053 Pfam:PF00054 SMART:SM00180
SMART:SM00282 PROSITE:PS01248 PROSITE:PS50027 PROSITE:PS50025
Pfam:PF02210 GO:GO:0045995 GeneTree:ENSGT00700000104140
InterPro:IPR018031 InterPro:IPR000034 InterPro:IPR008211
Pfam:PF00052 Pfam:PF00055 SMART:SM00281 SMART:SM00136
PROSITE:PS51115 PROSITE:PS51117 OMA:EPFYWRL GO:GO:0005606
EMBL:AAEX03005489 EMBL:AAEX03005490 EMBL:AAEX03005491
Ensembl:ENSCAFT00000029520 Uniprot:F1PJ02
Length = 3034
Score = 184 (69.8 bits), Expect = 1.2e-15, Sum P(2) = 1.2e-15
Identities = 44/133 (33%), Positives = 60/133 (45%)
Query: 199 GGRCKCNGHASRCI-KSPQGELVCECRHNTAGKDCEKCKPFFSDRPWGRATVYDANECKG 257
GG C C GHAS C +L C+C HNT G+ C +C P + +PW TV N C+
Sbjct: 220 GGMCICYGHASSCPWDETTKKLQCQCEHNTCGESCSRCCPGYHQQPWRPGTVSAGNTCE- 278
Query: 258 GRCKCNGHASRCIKSP---------------QGALVC-ECRHNTAGKDCEKCKPFFSDRP 301
+C C+ A C +G VC C NT G +CE C + RP
Sbjct: 279 -KCNCHNKAQDCYYDESVANQRRSLNTAGQFRGGGVCINCLQNTVGINCETCIDGYY-RP 336
Query: 302 WGRATVYDANECK 314
+ + Y+ N C+
Sbjct: 337 H-KVSPYEDNPCR 348
Score = 141 (54.7 bits), Expect = 1.2e-10, Sum P(2) = 1.2e-10
Identities = 36/94 (38%), Positives = 44/94 (46%)
Query: 221 CECRHNTAGKDCEKCKPFFSDRPWGRATVYDANECKGGRCKCNGHASRCIKSPQGALVCE 280
CEC AG CE C P + R G + C+ C+C+GHA+ C G VC
Sbjct: 662 CECPQGYAGISCESCLPGYY-RVDG---ILFGGICQP--CECHGHAAEC--DIHG--VCS 711
Query: 281 -CRHNTAGKDCEKCKPFFSDRPWGRATVYDANEC 313
C+HNT G CE+C P F P R T D C
Sbjct: 712 VCKHNTTGDHCEQCAPGFYGLP-SRGTPGDCQRC 744
Score = 139 (54.0 bits), Expect = 2.1e-10, Sum P(2) = 2.1e-10
Identities = 37/109 (33%), Positives = 49/109 (44%)
Query: 202 CKCNGHASRCIKSPQGELVCE-CRHNTAGKDCEKCKPFFSDRPWGRATVYDANECKGG-R 259
C+C+GHA+ C G VC C+HNT G CE+C P F P R T D C
Sbjct: 695 CECHGHAAEC--DIHG--VCSVCKHNTTGDHCEQCAPGFYGLP-SRGTPGDCQRCACPLS 749
Query: 260 CKCNGHASRCIKSPQGALVCE-CRHNTAGKDCEKCKPFFSDRPWGRATV 307
N + C +VC+ C +G CE+C +D +G TV
Sbjct: 750 TTSNNFSPTCHLEAGDEVVCDQCAPGYSGSWCERC----ADGYYGNPTV 794
Score = 120 (47.3 bits), Expect = 2.8e-08, Sum P(2) = 2.8e-08
Identities = 26/101 (25%), Positives = 41/101 (40%)
Query: 202 CKCNGHASRCIKSPQGELVCECRHNTAGKDCEKCKPFFSDRPWGRATVYDANECKGGRCK 261
C CN H+ C P+ C H+T G+ C+ C P + + G A+ D + C R
Sbjct: 1356 CNCNNHSDAC--DPETGKCLNCSHSTTGEHCDVCAPGYYGKVTGSAS--DCSPCACPRSH 1411
Query: 262 CNGHASRCIKSPQGALVCE-CRHNTAGKDCEKCKPFFSDRP 301
+ C+ C+ C G+ CE+C + P
Sbjct: 1412 PASFSPTCVLEGDADFRCDACVLGYEGQYCERCSSGYHGNP 1452
Score = 113 (44.8 bits), Expect = 1.6e-07, Sum P(2) = 1.6e-07
Identities = 27/95 (28%), Positives = 39/95 (41%)
Query: 221 CECRHNTAGKDCEKCKPFF--SDRPWGRATVYDANECKGGRCKCNGHASRCIKSPQGALV 278
C C TAG C+ C P + P G + C CN H+ C P+
Sbjct: 1315 CLCPPGTAGFSCQDCAPGYHRGKLPQGGSRGPRPLLAPCVPCNCNNHSDAC--DPETGKC 1372
Query: 279 CECRHNTAGKDCEKCKPFFSDRPWGRATVYDANEC 313
C H+T G+ C+ C P + + G A+ D + C
Sbjct: 1373 LNCSHSTTGEHCDVCAPGYYGKVTGSAS--DCSPC 1405
Score = 112 (44.5 bits), Expect = 2.1e-07, Sum P(2) = 2.1e-07
Identities = 30/99 (30%), Positives = 46/99 (46%)
Query: 202 CKCNGH-----ASRCIKSPQGELVCECRHNTAGKDCEKCKPFFSDRPWGRATVYDANECK 256
C C+G+ A C S GE + +C NT G CE+C F +G A A C+
Sbjct: 802 CNCSGNVDPFEAGHC-DSVTGECL-KCIGNTDGAHCERCADGF----YGDAVT--AKNCR 853
Query: 257 GGRCKCNGHASRCIKSPQGALVCECRHNTAGKDCEKCKP 295
C+C+G S +C+C+ + G+ C++C P
Sbjct: 854 A--CECHGKGSISDVCHLDTGLCDCKPHVTGQQCDQCLP 890
Score = 97 (39.2 bits), Expect = 9.3e-06, Sum P(2) = 9.3e-06
Identities = 26/104 (25%), Positives = 46/104 (44%)
Query: 202 CKCNGHASRCIKSPQGELVCECRHNTAGKDCEKCKPFFSDRPWGRATVYDANECKGGRCK 261
C+C+G S +C+C+ + G+ C++C P + +G T C C
Sbjct: 855 CECHGKGSISDVCHLDTGLCDCKPHVTGQQCDQCLPGY----YGLDTGLGCLPCN---CS 907
Query: 262 CNGHASR-CIKSPQGALVCECRHNTAGKDCEKC-KPFFSDRPWG 303
+G S C + Q C C AG+ C++C + F++ + G
Sbjct: 908 ASGSMSDDCTEDGQ----CHCLPGVAGEKCDRCARGFYAYQDGG 947
Score = 96 (38.9 bits), Expect = 1.2e-15, Sum P(2) = 1.2e-15
Identities = 34/133 (25%), Positives = 61/133 (45%)
Query: 71 CHVCDAGS--PRGRFPAEYLTDLNNPSNVTCWRSEAQTSVNSLSASPDNVTLTLSLGKKF 128
C +CDA S P+ R P D N W+S S+ + VT+TL L + F
Sbjct: 19 CRICDANSANPKERHPISNAIDGTN----NWWQSP---SIQN-GREYHWVTITLDLRQVF 70
Query: 129 ELTYISLSFCPKSIKPDSLAIYKSQDFGKSWQPLQFYS---SQCKKLYGRTAT-GVISRG 184
++ Y+ + + +P + + +S D G ++ P Q+Y+ ++C Y T G +
Sbjct: 71 QVAYVIIK-AANAPRPGNWILERSLD-GTTFSPWQYYAVSDTECLTRYNITPRRGPPTYR 128
Query: 185 NEQEALCTDRHKK 197
+ E +CT + +
Sbjct: 129 ADDEVICTSYYSR 141
Score = 94 (38.1 bits), Expect = 1.9e-05, Sum P(2) = 1.9e-05
Identities = 34/112 (30%), Positives = 47/112 (41%)
Query: 201 RCKC------NGHASRCIKSPQGELVCE-CRHNTAGKDCEKCKPFFSDRPWGRATVYDAN 253
RC C N + C E+VC+ C +G CE+C +D +G TV
Sbjct: 743 RCACPLSTTSNNFSPTCHLEAGDEVVCDQCAPGYSGSWCERC----ADGYYGNPTV-PGE 797
Query: 254 ECKGGRCKCNGH-----ASRCIKSPQGALVCECRHNTAGKDCEKCKP-FFSD 299
C C C+G+ A C S G + +C NT G CE+C F+ D
Sbjct: 798 SCVP--CNCSGNVDPFEAGHC-DSVTGECL-KCIGNTDGAHCERCADGFYGD 845
Score = 91 (37.1 bits), Expect = 3.9e-05, Sum P(2) = 3.9e-05
Identities = 29/100 (29%), Positives = 41/100 (41%)
Query: 202 CKC-NGH-AS---RCIKSPQGELVCE-CRHNTAGKDCEKCKPFFSDRPWGRATVYDANEC 255
C C H AS C+ + C+ C G+ CE+C + P RA C
Sbjct: 1405 CACPRSHPASFSPTCVLEGDADFRCDACVLGYEGQYCERCSSGYHGNP--RAL---GGTC 1459
Query: 256 KGGRCKCNGHASRCIKSPQGALVCECRHNTAGKDCEKCKP 295
+ RC C+ S +G+ C CR G CE+C+P
Sbjct: 1460 Q--RCDCSPSGSVHGDCDRGSGQCVCRPGATGLRCEQCEP 1497
Score = 88 (36.0 bits), Expect = 7.8e-05, Sum P(2) = 7.8e-05
Identities = 23/77 (29%), Positives = 36/77 (46%)
Query: 221 CECRHNTAGKDCEKCKPFFSDRPWGRATVYDANECKGGRCKCNGHASRCIKSPQGALVCE 280
C C+ AG+ C++C+ F + Y A C RC+C+ S + + C
Sbjct: 380 CPCKEGYAGEKCDRCQ--FGYK------AYPA--CI--RCECSRAGS--VNEDPCSEPCL 425
Query: 281 CRHNTAGKDCEKCKPFF 297
C+ N G +C+ CKP F
Sbjct: 426 CKENVEGDNCDLCKPGF 442
Score = 86 (35.3 bits), Expect = 0.00012, Sum P(2) = 0.00012
Identities = 27/106 (25%), Positives = 37/106 (34%)
Query: 197 KQGGRCKCN-GHASRCIKSPQGELVCECRHNTAGKDCEKCKPFFSDRPWGRATVYDANEC 255
+ GG C+ H G C C +T G C++C+ D WG C
Sbjct: 944 QDGGCTPCDCAHTQHTCDPESG--ACICPPHTRGATCDQCE----DGYWGHDLELGCQAC 997
Query: 256 KGGRCKCNGHASRCIKSPQGALVCECRHNTAGKDCEKCKPFFSDRP 301
C G AS + G C C+ G C +C + D P
Sbjct: 998 N---CSAVGSASHGCDALTGH--CPCKPAFGGLSCHQCSLGYRDFP 1038
Score = 41 (19.5 bits), Expect = 5.5e-05, Sum P(2) = 5.5e-05
Identities = 8/21 (38%), Positives = 9/21 (42%)
Query: 10 PLLIGAVCGEKIDLNSDPCYE 30
P I C +N DPC E
Sbjct: 402 PACIRCECSRAGSVNEDPCSE 422
>ZFIN|ZDB-GENE-060503-794 [details] [associations]
symbol:ush2a "Usher syndrome 2A (autosomal
recessive, mild)" species:7955 "Danio rerio" [GO:0042462 "eye
photoreceptor cell development" evidence=IGI] InterPro:IPR003961
Pfam:PF00041 PROSITE:PS50853 SMART:SM00060 ZFIN:ZDB-GENE-060503-794
Gene3D:2.60.40.10 InterPro:IPR013783 SUPFAM:SSF49265
Gene3D:2.60.120.200 InterPro:IPR008985 InterPro:IPR013320
SUPFAM:SSF49899 InterPro:IPR002049 InterPro:IPR001791 Pfam:PF00053
SMART:SM00180 SMART:SM00282 PROSITE:PS01248 PROSITE:PS50027
PROSITE:PS50025 Pfam:PF02210 GO:GO:0042462 InterPro:IPR008211
Pfam:PF00055 SMART:SM00136 PROSITE:PS51117
GeneTree:ENSGT00700000104042 eggNOG:NOG245744 HOGENOM:HOG000124780
HOVERGEN:HBG094138 OMA:EIRIQAC OrthoDB:EOG4B5P57 InterPro:IPR026915
PANTHER:PTHR10574:SF53 EMBL:AL845481 EMBL:CT027582 EMBL:AL928842
EMBL:AL929128 IPI:IPI00882773 UniGene:Dr.118940 UniGene:Dr.158626
Ensembl:ENSDART00000086201 InParanoid:Q1MTD2 Uniprot:Q1MTD2
Length = 5236
Score = 193 (73.0 bits), Expect = 3.9e-15, Sum P(2) = 3.9e-15
Identities = 47/129 (36%), Positives = 66/129 (51%)
Query: 200 GRCKCNGHASRCIKSPQGELVCEC--RHNTAGKDCEKCKPFFSDRPWGRATVYDANECKG 257
GRC+C+GHA C S C C +T G +CE+C P F+D+P+ A C+
Sbjct: 528 GRCECHGHADSCDTSVS-PYRCACLPESHTHGANCERCIPLFNDKPFRPGDQIQAFNCRP 586
Query: 258 GRCKCNGHASRCIKS----PQ-------GALVCE-CRHNTAGKDCEKCKPFFSDRPWGRA 305
C+C GHAS C + P G VC+ C HNT G++CE+C+ F R G A
Sbjct: 587 --CQCYGHASSCHYNSSLDPHPGEHFRGGGGVCDDCTHNTTGRNCERCRSLFY-REVG-A 642
Query: 306 TVYDANECK 314
++ + CK
Sbjct: 643 LLWATDVCK 651
Score = 141 (54.7 bits), Expect = 5.1e-09, Sum P(2) = 5.1e-09
Identities = 35/109 (32%), Positives = 54/109 (49%)
Query: 202 CKCNGHASRC-----IKSPQGEL------VCE-CRHNTAGKDCEKCKPFFSDRPWGRATV 249
C+C GHAS C + GE VC+ C HNT G++CE+C+ F R G A +
Sbjct: 587 CQCYGHASSCHYNSSLDPHPGEHFRGGGGVCDDCTHNTTGRNCERCRSLFY-REVG-ALL 644
Query: 250 YDANECKGGRCKCNGHASRCIK-SPQGALVCECRHNTAGKDCEKCKPFF 297
+ + CK C G + + P G C+C+ + +G+ C +C+ F
Sbjct: 645 WATDVCKACECHSAGTINASLHCEPIGGQ-CKCKRHVSGRQCNQCQHGF 692
Score = 95 (38.5 bits), Expect = 0.00060, Sum P(2) = 0.00060
Identities = 25/98 (25%), Positives = 44/98 (44%)
Query: 202 CK-CNGHASRCIKS-----PQGELVCECRHNTAGKDCEKCKPFFSDRPWGRATVYDANEC 255
CK C H++ I + P G C+C+ + +G+ C +C+ F ++ + D C
Sbjct: 650 CKACECHSAGTINASLHCEPIGGQ-CKCKRHVSGRQCNQCQHGFYKL---QSALADG--C 703
Query: 256 KGGRCKCNGHASRCIKSPQGALVCECRHNTAGKDCEKC 293
+ C G I Q + C+C+ N G C++C
Sbjct: 704 RACNCNTAGTVQPDITCHQDSGQCQCKANVIGLTCDRC 741
Score = 85 (35.0 bits), Expect = 3.9e-15, Sum P(2) = 3.9e-15
Identities = 30/130 (23%), Positives = 53/130 (40%)
Query: 62 ERYCDTSGACHVCDAGSPRGRFPAEYLTDLNNPSNVTCWRSEAQTSVNSLSASPDNVTLT 121
ERYC + A R A L +N+ T W S S+ L +T+T
Sbjct: 328 ERYCIPNAANDTTHNKVLRLNQDAHPLDYINDNDIGTTWISSIFPSIELLDKG---ITIT 384
Query: 122 LSLGK-KFELTYISLSFCPKSIKPDSLAIYKSQDFGKSWQPLQFYSSQCKKLYGRTATGV 180
+ L ++++ Y+ L F + +P+++ I + W+ QF + C +G G
Sbjct: 385 IDLENGQYQVFYVILQFL--NAQPEAVRIQRKTVGSSEWKDWQFLAKNCS-YFGMEDNGA 441
Query: 181 ISRGNEQEAL 190
+ R + L
Sbjct: 442 LDRPDSVNCL 451
Score = 47 (21.6 bits), Expect = 3.4e-11, Sum P(2) = 3.4e-11
Identities = 17/80 (21%), Positives = 28/80 (35%)
Query: 54 SVCGLESPERYCDTSGA------C--HVCDAGSPRGRFPAEYLTDLNNPSNVTCWRSEAQ 105
+ CG+ +C C C PR EY+ D+ + TCW+ +A+
Sbjct: 70 ATCGIPERSTFCQAGQVQEDLLTCIQKFCIQECPRRPSTPEYI-DVLTVNVATCWKGDAR 128
Query: 106 TSVNSLSASPDNVTLTLSLG 125
A+ + S G
Sbjct: 129 DLRPGAEANSSSFVFPTSKG 148
>UNIPROTKB|O75445 [details] [associations]
symbol:USH2A "Usherin" species:9606 "Homo sapiens"
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0050896
"response to stimulus" evidence=IEA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0050953 "sensory perception of light stimulus"
evidence=IMP] [GO:0005518 "collagen binding" evidence=IDA]
[GO:0007605 "sensory perception of sound" evidence=IMP] [GO:0048496
"maintenance of organ identity" evidence=IMP] [GO:0045494
"photoreceptor cell maintenance" evidence=IMP] [GO:0005737
"cytoplasm" evidence=IDA] [GO:0005604 "basement membrane"
evidence=IDA] [GO:0035315 "hair cell differentiation" evidence=ISS]
[GO:0060113 "inner ear receptor cell differentiation" evidence=ISS]
[GO:0017022 "myosin binding" evidence=ISS] [GO:0002142 "stereocilia
ankle link complex" evidence=ISS] [GO:0016324 "apical plasma
membrane" evidence=ISS] [GO:0032421 "stereocilium bundle"
evidence=ISS] [GO:0060171 "stereocilium membrane" evidence=ISS]
InterPro:IPR003961 Pfam:PF00041 PROSITE:PS50853 SMART:SM00060
GO:GO:0016021 GO:GO:0005737 Gene3D:2.60.40.10 InterPro:IPR013783
GO:GO:0016324 SUPFAM:SSF49265 Orphanet:791 GO:GO:0045494
GO:GO:0050896 PROSITE:PS00022 Gene3D:2.60.120.200
InterPro:IPR008985 InterPro:IPR013320 SUPFAM:SSF49899 GO:GO:0005518
GO:GO:0007605 GO:GO:0017022 InterPro:IPR002049 InterPro:IPR001791
Pfam:PF00053 SMART:SM00180 SMART:SM00282 PROSITE:PS01248
PROSITE:PS50027 PROSITE:PS50025 GO:GO:0005604 GO:GO:0060113
Pfam:PF02210 GO:GO:0035315 InterPro:IPR008211 Pfam:PF00055
SMART:SM00136 PROSITE:PS51117 EMBL:AL445650 Orphanet:231178
GO:GO:0002142 GO:GO:0048496 EMBL:AC092799 GO:GO:0060171
InterPro:IPR006558 SMART:SM00560 EMBL:AF055580 EMBL:AF091889
EMBL:AF091873 EMBL:AF091875 EMBL:AF091876 EMBL:AF091874
EMBL:AF091877 EMBL:AF091879 EMBL:AF091881 EMBL:AF091883
EMBL:AF091888 EMBL:AF091887 EMBL:AF091886 EMBL:AF091885
EMBL:AF091884 EMBL:AF091882 EMBL:AF091880 EMBL:AF091878
EMBL:AY481573 EMBL:AC138024 EMBL:AL358858 EMBL:AC093581
EMBL:AC119429 EMBL:AL139259 EMBL:AL358452 EMBL:AL513305
IPI:IPI00289540 IPI:IPI00410150 IPI:IPI00741527 RefSeq:NP_009054.5
RefSeq:NP_996816.2 UniGene:Hs.655974 ProteinModelPortal:O75445
STRING:O75445 PhosphoSite:O75445 PaxDb:O75445 PRIDE:O75445
Ensembl:ENST00000307340 Ensembl:ENST00000366942
Ensembl:ENST00000366943 GeneID:7399 KEGG:hsa:7399 UCSC:uc001hku.1
UCSC:uc001hkv.3 CTD:7399 GeneCards:GC01M215796 H-InvDB:HIX0028527
HGNC:HGNC:12601 MIM:276901 MIM:608400 MIM:613809 neXtProt:NX_O75445
PharmGKB:PA37228 eggNOG:NOG245744 HOGENOM:HOG000124780
HOVERGEN:HBG094138 OMA:EIRIQAC OrthoDB:EOG4B5P57 GenomeRNAi:7399
NextBio:28962 Bgee:O75445 CleanEx:HS_USH2A Genevestigator:O75445
GermOnline:ENSG00000042781 InterPro:IPR026915
PANTHER:PTHR10574:SF53 Uniprot:O75445
Length = 5202
Score = 185 (70.2 bits), Expect = 2.3e-14, Sum P(3) = 2.3e-14
Identities = 40/111 (36%), Positives = 57/111 (51%)
Query: 200 GRCKCNGHASRCIKSPQG-ELVCECRHNTAGKDCEKCKPFFSDRPWGRATVYDANECKGG 258
GRC+C+GHA C + Q +C T G C++C P ++D+P+ + A CK
Sbjct: 516 GRCQCHGHADNCDTTSQPYRCLCSQESFTEGLHCDRCLPLYNDKPFRQGDQVYAFNCKP- 574
Query: 259 RCKCNGHASRC---IK-SP-------QGALVCE-CRHNTAGKDCEKCKPFF 297
C+CN H+ C I P G VC+ C HNT G++CE CK +F
Sbjct: 575 -CQCNSHSKSCHYNISVDPFPFEHFRGGGGVCDDCEHNTTGRNCELCKDYF 624
Score = 128 (50.1 bits), Expect = 1.4e-07, Sum P(3) = 1.4e-07
Identities = 33/108 (30%), Positives = 48/108 (44%)
Query: 202 CKCNGHASRC---IK-SP-------QGELVCE-CRHNTAGKDCEKCKPFFSDRPWGRATV 249
C+CN H+ C I P G VC+ C HNT G++CE CK +F + +
Sbjct: 575 CQCNSHSKSCHYNISVDPFPFEHFRGGGGVCDDCEHNTTGRNCELCKDYFFRQVGADPSA 634
Query: 250 YDANECKGGRCKCNGHASRCIKSPQGALVCECRHNTAGKDCEKCKPFF 297
D CK C G + I Q C C+ + +G+ C +C+ F
Sbjct: 635 IDV--CKPCDCDTVGTRNGSILCDQIGGQCNCKRHVSGRQCNQCQNGF 680
Score = 111 (44.1 bits), Expect = 1.0e-05, Sum P(3) = 1.0e-05
Identities = 23/71 (32%), Positives = 35/71 (49%)
Query: 246 RATVYDANECK-GGRCKCNGHASRCIKSPQG-ALVCECRHNTAGKDCEKCKPFFSDRPWG 303
R Y +E GRC+C+GHA C + Q +C T G C++C P ++D+P+
Sbjct: 503 RHRYYAVDEITISGRCQCHGHADNCDTTSQPYRCLCSQESFTEGLHCDRCLPLYNDKPFR 562
Query: 304 RATVYDANECK 314
+ A CK
Sbjct: 563 QGDQVYAFNCK 573
Score = 101 (40.6 bits), Expect = 0.00013, Sum P(3) = 0.00013
Identities = 26/94 (27%), Positives = 38/94 (40%)
Query: 202 CKCNGHAS--RCIKSPQGELVCECRHNTAGKDCEKCKPFFSDRPWGRATVYDANECKGGR 259
C+CN H S + G+ CEC+ G C+ C+ F +G D CK
Sbjct: 747 CQCNLHGSVNKFCNPHSGQ--CECKKEAKGLQCDTCRENF----YG----LDVTNCKACD 796
Query: 260 CKCNGHASRCIKSPQGALVCECRHNTAGKDCEKC 293
C G + + + C C+ N G+ C KC
Sbjct: 797 CDTAGSLPGTVCNAKTGQ-CICKPNVEGRQCNKC 829
Score = 96 (38.9 bits), Expect = 0.00044, Sum P(3) = 0.00044
Identities = 27/99 (27%), Positives = 38/99 (38%)
Query: 202 CKCN--GHASRCIKSPQGELVCECRHNTAGKDCEKCKPFFSDRPWGRATVYDANECKGGR 259
C CN G I Q C+C+ N G C+ C +G + N+
Sbjct: 694 CNCNTSGTVDGDITCHQNSGQCKCKANVIGLRCDHCN-------FGFKFLRSFNDVGCEP 746
Query: 260 CKCNGHAS-RCIKSPQGALVCECRHNTAGKDCEKCKPFF 297
C+CN H S +P CEC+ G C+ C+ F
Sbjct: 747 CQCNLHGSVNKFCNPHSGQ-CECKKEAKGLQCDTCRENF 784
Score = 96 (38.9 bits), Expect = 0.00044, Sum P(3) = 0.00044
Identities = 34/108 (31%), Positives = 47/108 (43%)
Query: 202 CKCN--GHASRCIKSP-QGELVCECRHNTAGKDCEKCKPFFSDRPWGRATVYDANECKGG 258
C+C+ G I P G+ C C N G+ C +C+P F P G AT C
Sbjct: 900 CECDSLGTLPGTICDPISGQ--CLCVPNRQGRRCNQCQPGFYISP-GNAT-----GCLPC 951
Query: 259 RCKCNGHASRCIKSPQGALVCECRHNTAGKDCEKCKP-FFS-DRPWGR 304
C G + S G VC+ + AG+ C++CK +F D GR
Sbjct: 952 SCHTTGAVNHICNSLTGQCVCQDA-SIAGQRCDQCKDHYFGFDPQTGR 998
Score = 89 (36.4 bits), Expect = 2.3e-14, Sum P(3) = 2.3e-14
Identities = 29/130 (22%), Positives = 58/130 (44%)
Query: 62 ERYCDTSGACHVCDAGSPRGRFPAEYLTDLNNPSNVTCWRSEAQTSVNSLSASPDNVTLT 121
+RYC + A D R A L+ +N+ T W S T++ L+ VT++
Sbjct: 316 QRYCIPNDAGDTADNRVSRLNPEAHPLSFVNDNDVGTSWVSNVFTNITQLN---QGVTIS 372
Query: 122 LSLGK-KFELTYISLSFCPKSIKPDSLAIYKSQDFGKSWQPLQFYSSQCKKLYGRTATGV 180
+ L ++++ YI + F S +P + I + ++ W+ Q+++ C +G G
Sbjct: 373 VDLENGQYQVFYIIIQFF--SPQPTEIRIQRKKENSLDWEDWQYFARNCGA-FGMKNNGD 429
Query: 181 ISRGNEQEAL 190
+ + + L
Sbjct: 430 LEKPDSVNCL 439
Score = 43 (20.2 bits), Expect = 2.3e-14, Sum P(3) = 2.3e-14
Identities = 8/21 (38%), Positives = 11/21 (52%)
Query: 50 VKVNSVCGLESPERYCDTSGA 70
V +VCGL +C +S A
Sbjct: 52 VPTQAVCGLPDRSTFCHSSAA 72
>MGI|MGI:1341292 [details] [associations]
symbol:Ush2a "Usher syndrome 2A (autosomal recessive, mild)"
species:10090 "Mus musculus" [GO:0001917 "photoreceptor inner
segment" evidence=ISO] [GO:0002141 "stereocilia ankle link"
evidence=NAS] [GO:0002142 "stereocilia ankle link complex"
evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005518 "collagen binding" evidence=ISO;IDA] [GO:0005576
"extracellular region" evidence=IEA] [GO:0005604 "basement
membrane" evidence=ISO;IDA] [GO:0005737 "cytoplasm" evidence=ISO]
[GO:0005886 "plasma membrane" evidence=IEA] [GO:0007601 "visual
perception" evidence=IEA] [GO:0007605 "sensory perception of sound"
evidence=ISO] [GO:0016020 "membrane" evidence=IEA] [GO:0016021
"integral to membrane" evidence=IEA] [GO:0016324 "apical plasma
membrane" evidence=IDA] [GO:0017022 "myosin binding" evidence=IPI]
[GO:0032391 "photoreceptor connecting cilium" evidence=ISO]
[GO:0032421 "stereocilium bundle" evidence=IDA] [GO:0042995 "cell
projection" evidence=IEA] [GO:0043025 "neuronal cell body"
evidence=ISO] [GO:0045494 "photoreceptor cell maintenance"
evidence=ISO;IMP] [GO:0048496 "maintenance of organ identity"
evidence=ISO] [GO:0050896 "response to stimulus" evidence=IEA]
[GO:0050953 "sensory perception of light stimulus" evidence=ISO]
[GO:0060113 "inner ear receptor cell differentiation" evidence=IMP]
[GO:0060171 "stereocilium membrane" evidence=IDA]
InterPro:IPR003961 Pfam:PF00041 PROSITE:PS50853 SMART:SM00060
MGI:MGI:1341292 GO:GO:0016021 GO:GO:0005737 Gene3D:2.60.40.10
InterPro:IPR013783 GO:GO:0016324 SUPFAM:SSF49265 GO:GO:0045494
GO:GO:0050896 PROSITE:PS00022 Gene3D:2.60.120.200
InterPro:IPR008985 InterPro:IPR013320 SUPFAM:SSF49899 GO:GO:0005518
GO:GO:0007605 InterPro:IPR002049 InterPro:IPR001791 Pfam:PF00053
SMART:SM00180 SMART:SM00282 PROSITE:PS01248 PROSITE:PS50027
PROSITE:PS50025 GO:GO:0005604 GO:GO:0060113 Pfam:PF02210
GO:GO:0035315 InterPro:IPR008211 Pfam:PF00055 SMART:SM00136
PROSITE:PS51117 GO:GO:0002142 GO:GO:0048496 GO:GO:0060171
GeneTree:ENSGT00700000104042 CTD:7399 eggNOG:NOG245744
HOGENOM:HOG000124780 HOVERGEN:HBG094138 OMA:EIRIQAC
OrthoDB:EOG4B5P57 InterPro:IPR026915 PANTHER:PTHR10574:SF53
EMBL:AF151717 EMBL:DQ073638 EMBL:AC121799 EMBL:AC121892
EMBL:AC122122 EMBL:AC129312 EMBL:AC135863 EMBL:AC165230
IPI:IPI00720231 IPI:IPI00742431 IPI:IPI01007786 RefSeq:NP_067383.3
UniGene:Mm.331238 ProteinModelPortal:Q2QI47 STRING:Q2QI47
PhosphoSite:Q2QI47 PRIDE:Q2QI47 Ensembl:ENSMUST00000060479
GeneID:22283 KEGG:mmu:22283 UCSC:uc007eae.1 UCSC:uc007eaf.1
ChiTaRS:USH2A NextBio:302411 Bgee:Q2QI47 Genevestigator:Q2QI47
GermOnline:ENSMUSG00000026609 Uniprot:Q2QI47
Length = 5193
Score = 191 (72.3 bits), Expect = 3.7e-14, Sum P(2) = 3.7e-14
Identities = 43/128 (33%), Positives = 65/128 (50%)
Query: 200 GRCKCNGHASRCIKSPQG-ELVCECRHNTAGKDCEKCKPFFSDRPWGRATVYDANECKGG 258
GRC+C+GHA C ++ + +C T G C++C P ++D+P+ +A CK
Sbjct: 513 GRCQCHGHAETCDRTRRPYRCLCSPHSFTEGPQCDRCSPLYNDKPFRSGDNVNAFNCKP- 571
Query: 259 RCKCNGHASRCIKSPQ-----------GALVCE-CRHNTAGKDCEKCKPFFSDRPWGRAT 306
C+C+GHAS C G VC+ C+H+T G+ CE C+ +F RP G A
Sbjct: 572 -CQCHGHASSCHYDASVDPFPLEHNRGGGGVCDDCQHHTTGRHCESCQDYFY-RPVG-AD 628
Query: 307 VYDANECK 314
+ CK
Sbjct: 629 PAAPDACK 636
Score = 135 (52.6 bits), Expect = 1.3e-07, Sum P(2) = 1.3e-07
Identities = 38/115 (33%), Positives = 54/115 (46%)
Query: 202 CKCNGHASRCIKSPQ-----------GELVCE-CRHNTAGKDCEKCKPFFSDRPWGRATV 249
C+C+GHAS C G VC+ C+H+T G+ CE C+ +F RP G A
Sbjct: 572 CQCHGHASSCHYDASVDPFPLEHNRGGGGVCDDCQHHTTGRHCESCQDYFY-RPVG-ADP 629
Query: 250 YDANECKGGRCKCNGHASR-----CIKSPQGALVCECRHNTAGKDCEKCKPFFSD 299
+ CK C CN +R C P G C+C+ +G+ C +C+ F D
Sbjct: 630 AAPDACK--LCDCNRAGTRNGSLHC--DPIGGQ-CDCKRRVSGRQCLQCQDGFYD 679
Score = 110 (43.8 bits), Expect = 7.2e-05, Sum P(2) = 7.2e-05
Identities = 30/114 (26%), Positives = 43/114 (37%)
Query: 202 CKCN--GHASRCIKSPQGELVCECRHNTAGKDCEKCKPFFSDRPWGRATVYDANECKGGR 259
C CN G I Q C C+ N G C +C F ++ + C+
Sbjct: 691 CNCNPSGTVDGDITCHQNSGQCSCKANVIGLRCNRCNFGFKF-----LQSFNGDGCEP-- 743
Query: 260 CKCNGHAS-RCIKSPQGALVCECRHNTAGKDCEKCKPFFSDRPWGRATVYDANE 312
C+CN H S + P C C+ G C+ C+ F PW V D ++
Sbjct: 744 CQCNLHGSVNQLCDPLSGQ-CACKKEAKGLKCDSCRENFYGLPWSACEVCDCSK 796
Score = 78 (32.5 bits), Expect = 3.7e-14, Sum P(2) = 3.7e-14
Identities = 23/111 (20%), Positives = 51/111 (45%)
Query: 60 SPERYCDTSGACHVCDAGSPRGRFPAEYLTDLNNPSNVTCWRSEAQTSVNSLSASPDNVT 119
S ++YC +GA + R A L+ +N+ T W S T++ L + V
Sbjct: 311 SVQQYCIPNGAGDTPEHRMSRLNPEAHPLSFINDDDVATSWISHVFTNITQLY---EGVA 367
Query: 120 LTLSLGK-KFELTYISLSFCPKSIKPDSLAIYKSQDFGKSWQPLQFYSSQC 169
+++ L ++++ + F S++P ++ I + + W+ Q+++ C
Sbjct: 368 ISIDLENGQYQVLKVITQF--SSLQPVAIRIQRKKADSSPWEDWQYFARNC 416
Score = 39 (18.8 bits), Expect = 4.0e-10, Sum P(2) = 4.0e-10
Identities = 8/25 (32%), Positives = 12/25 (48%)
Query: 50 VKVNSVCGLESPERYCDTSGAC-HV 73
V ++ CG P +C + A HV
Sbjct: 51 VPTHATCGFPGPSTFCRSPVAAEHV 75
>WB|WBGene00006787 [details] [associations]
symbol:unc-52 species:6239 "Caenorhabditis elegans"
[GO:0005509 "calcium ion binding" evidence=IEA] [GO:0009792 "embryo
development ending in birth or egg hatching" evidence=IGI;IMP]
[GO:0008340 "determination of adult lifespan" evidence=IMP]
[GO:0040011 "locomotion" evidence=IMP] [GO:0040010 "positive
regulation of growth rate" evidence=IMP] [GO:0002119 "nematode
larval development" evidence=IMP] [GO:0000003 "reproduction"
evidence=IMP] [GO:0061199 "striated muscle contraction involved in
embryonic body morphogenesis" evidence=IMP] [GO:0018996 "molting
cycle, collagen and cuticulin-based cuticle" evidence=IMP]
[GO:0006898 "receptor-mediated endocytosis" evidence=IMP]
[GO:0016358 "dendrite development" evidence=IMP] [GO:0030163
"protein catabolic process" evidence=IMP] [GO:0007517 "muscle organ
development" evidence=IMP] [GO:0007173 "epidermal growth factor
receptor signaling pathway" evidence=IGI] [GO:0016477 "cell
migration" evidence=IGI] [GO:0048644 "muscle organ morphogenesis"
evidence=IGI] [GO:0005604 "basement membrane" evidence=IDA]
[GO:0005198 "structural molecule activity" evidence=ISS]
[GO:0031581 "hemidesmosome assembly" evidence=IGI] [GO:0040017
"positive regulation of locomotion" evidence=IMP]
InterPro:IPR000742 InterPro:IPR002172 InterPro:IPR007110
Pfam:PF00057 PROSITE:PS50026 PROSITE:PS50068 PROSITE:PS50835
SMART:SM00181 SMART:SM00192 EMBL:Z93375 GO:GO:0008340 GO:GO:0009792
GO:GO:0006898 GO:GO:0040010 GO:GO:0007173 Gene3D:2.60.40.10
InterPro:IPR013783 GO:GO:0016477 GO:GO:0002119 GO:GO:0048644
GO:GO:0005198 GO:GO:0018996 InterPro:IPR003599 SMART:SM00409
InterPro:IPR003598 SMART:SM00408 GO:GO:0016358 GO:GO:0040017
GO:GO:0000003 InterPro:IPR013032 PROSITE:PS00022
Gene3D:2.60.120.200 InterPro:IPR008985 InterPro:IPR013320
SUPFAM:SSF49899 GO:GO:0030239 GO:GO:0030163 PROSITE:PS01186
Gene3D:4.10.400.10 InterPro:IPR023415 SUPFAM:SSF57424
PROSITE:PS01209 InterPro:IPR002049 InterPro:IPR001791 Pfam:PF00053
SMART:SM00180 SMART:SM00282 PROSITE:PS01248 PROSITE:PS50027
PROSITE:PS50025 GeneTree:ENSGT00530000063501 GO:GO:0005604
InterPro:IPR013098 Pfam:PF07679 InterPro:IPR009030 SUPFAM:SSF57184
Pfam:PF02210 GO:GO:0031581 InterPro:IPR018031 InterPro:IPR000034
Pfam:PF00052 SMART:SM00281 PROSITE:PS51115 GO:GO:0061199
eggNOG:NOG258321 OMA:GVTQQCA EMBL:L13458 EMBL:Z93395 EMBL:AF132883
PIR:C88369 PIR:F88369 PIR:T19821 RefSeq:NP_001022488.1
RefSeq:NP_497044.3 RefSeq:NP_497045.1 RefSeq:NP_497046.1
RefSeq:NP_497047.1 ProteinModelPortal:Q06561 SMR:Q06561
IntAct:Q06561 STRING:Q06561 PaxDb:Q06561 PRIDE:Q06561
EnsemblMetazoa:ZC101.2e GeneID:175126 KEGG:cel:CELE_ZC101.2
UCSC:ZC101.2e CTD:175126 WormBase:ZC101.2a WormBase:ZC101.2b
WormBase:ZC101.2c WormBase:ZC101.2e WormBase:ZC101.2f
InParanoid:Q06561 NextBio:886870 ArrayExpress:Q06561 Uniprot:Q06561
Length = 3375
Score = 208 (78.3 bits), Expect = 2.0e-13, P = 2.0e-13
Identities = 48/116 (41%), Positives = 61/116 (52%)
Query: 201 RCKCNGHASRCIKSPQGELVCECRHNTAGKDCEKCKP-FFSDRPWGRATVYDAN-ECKGG 258
+C+CNGHAS+C K G + +C+HNT G CE+CKP F D R T D E
Sbjct: 954 KCECNGHASQCDKE-YGYCL-DCQHNTEGDQCERCKPGFVGDAR--RGTPNDCQPEATRA 1009
Query: 259 RCKCNGHASRCIKSPQGALVCECRHNTAGKDCEKCKP-FFSDRPWGRATVYDANEC 313
C CN H+ R S L+CE HNT G CE+CK ++ D G + YD C
Sbjct: 1010 PCHCNNHSPRGCDSFGRCLLCE--HNTEGTHCERCKKGYYGDATKG--SPYDCTPC 1061
Score = 147 (56.8 bits), Expect = 1.5e-05, Sum P(2) = 1.5e-05
Identities = 32/77 (41%), Positives = 41/77 (53%)
Query: 221 CECRHNTAGKDCEKCKPFFSDRPWGRATVYDANECKGGRCKCNGHASRCIKSPQGALVCE 280
C C G CE C P +S G +Y C+ +C+CNGHAS+C K L +
Sbjct: 922 CICPPGYVGTSCEDCAPGYSRTGGG---LY-LGLCE--KCECNGHASQCDKEYGYCL--D 973
Query: 281 CRHNTAGKDCEKCKPFF 297
C+HNT G CE+CKP F
Sbjct: 974 CQHNTEGDQCERCKPGF 990
Score = 144 (55.7 bits), Expect = 4.6e-06, P = 4.6e-06
Identities = 38/106 (35%), Positives = 51/106 (48%)
Query: 202 CKCNGHASRCIKSPQGELVCECRHNTAGKDCEKCKPFFSDRPWGRATVYDANECKGGRCK 261
C CN H+ R S L+CE HNT G CE+CK + +G AT +C C
Sbjct: 1011 CHCNNHSPRGCDSFGRCLLCE--HNTEGTHCERCKKGY----YGDATKGSPYDCTP--CP 1062
Query: 262 CNGHASRCIKSPQGALVCE-CRHNTAGKDCEKCKPFF--SDRPWGR 304
C G AS C +G + C C G+ C +C P + S++P GR
Sbjct: 1063 CPG-ASDCYLDNEGQVACRICPAGLQGRLCNECAPGYTRSNKPAGR 1107
Score = 41 (19.5 bits), Expect = 1.5e-05, Sum P(2) = 1.5e-05
Identities = 12/35 (34%), Positives = 16/35 (45%)
Query: 191 CTDRHKKQGGRC-KCNGHASRCI-KSPQGELVCEC 223
C + + G C +C A KSP+G L C C
Sbjct: 400 CECKSQVTGPNCDQCKPGAFHLSEKSPEGCLKCFC 434
>UNIPROTKB|Q06561 [details] [associations]
symbol:unc-52 "Basement membrane proteoglycan" species:6239
"Caenorhabditis elegans" [GO:0003674 "molecular_function"
evidence=ND] [GO:0030239 "myofibril assembly" evidence=IEP]
[GO:0005578 "proteinaceous extracellular matrix" evidence=IDA]
InterPro:IPR000742 InterPro:IPR002172 InterPro:IPR007110
Pfam:PF00057 PROSITE:PS50026 PROSITE:PS50068 PROSITE:PS50835
SMART:SM00181 SMART:SM00192 EMBL:Z93375 GO:GO:0008340 GO:GO:0009792
GO:GO:0006898 GO:GO:0040010 GO:GO:0007173 Gene3D:2.60.40.10
InterPro:IPR013783 GO:GO:0016477 GO:GO:0002119 GO:GO:0048644
GO:GO:0005198 GO:GO:0018996 InterPro:IPR003599 SMART:SM00409
InterPro:IPR003598 SMART:SM00408 GO:GO:0016358 GO:GO:0040017
GO:GO:0000003 InterPro:IPR013032 PROSITE:PS00022
Gene3D:2.60.120.200 InterPro:IPR008985 InterPro:IPR013320
SUPFAM:SSF49899 GO:GO:0030239 GO:GO:0030163 PROSITE:PS01186
Gene3D:4.10.400.10 InterPro:IPR023415 SUPFAM:SSF57424
PROSITE:PS01209 InterPro:IPR002049 InterPro:IPR001791 Pfam:PF00053
SMART:SM00180 SMART:SM00282 PROSITE:PS01248 PROSITE:PS50027
PROSITE:PS50025 GeneTree:ENSGT00530000063501 GO:GO:0005604
InterPro:IPR013098 Pfam:PF07679 InterPro:IPR009030 SUPFAM:SSF57184
Pfam:PF02210 GO:GO:0031581 InterPro:IPR018031 InterPro:IPR000034
Pfam:PF00052 SMART:SM00281 PROSITE:PS51115 GO:GO:0061199
eggNOG:NOG258321 OMA:GVTQQCA EMBL:L13458 EMBL:Z93395 EMBL:AF132883
PIR:C88369 PIR:F88369 PIR:T19821 RefSeq:NP_001022488.1
RefSeq:NP_497044.3 RefSeq:NP_497045.1 RefSeq:NP_497046.1
RefSeq:NP_497047.1 ProteinModelPortal:Q06561 SMR:Q06561
IntAct:Q06561 STRING:Q06561 PaxDb:Q06561 PRIDE:Q06561
EnsemblMetazoa:ZC101.2e GeneID:175126 KEGG:cel:CELE_ZC101.2
UCSC:ZC101.2e CTD:175126 WormBase:ZC101.2a WormBase:ZC101.2b
WormBase:ZC101.2c WormBase:ZC101.2e WormBase:ZC101.2f
InParanoid:Q06561 NextBio:886870 ArrayExpress:Q06561 Uniprot:Q06561
Length = 3375
Score = 208 (78.3 bits), Expect = 2.0e-13, P = 2.0e-13
Identities = 48/116 (41%), Positives = 61/116 (52%)
Query: 201 RCKCNGHASRCIKSPQGELVCECRHNTAGKDCEKCKP-FFSDRPWGRATVYDAN-ECKGG 258
+C+CNGHAS+C K G + +C+HNT G CE+CKP F D R T D E
Sbjct: 954 KCECNGHASQCDKE-YGYCL-DCQHNTEGDQCERCKPGFVGDAR--RGTPNDCQPEATRA 1009
Query: 259 RCKCNGHASRCIKSPQGALVCECRHNTAGKDCEKCKP-FFSDRPWGRATVYDANEC 313
C CN H+ R S L+CE HNT G CE+CK ++ D G + YD C
Sbjct: 1010 PCHCNNHSPRGCDSFGRCLLCE--HNTEGTHCERCKKGYYGDATKG--SPYDCTPC 1061
Score = 147 (56.8 bits), Expect = 1.5e-05, Sum P(2) = 1.5e-05
Identities = 32/77 (41%), Positives = 41/77 (53%)
Query: 221 CECRHNTAGKDCEKCKPFFSDRPWGRATVYDANECKGGRCKCNGHASRCIKSPQGALVCE 280
C C G CE C P +S G +Y C+ +C+CNGHAS+C K L +
Sbjct: 922 CICPPGYVGTSCEDCAPGYSRTGGG---LY-LGLCE--KCECNGHASQCDKEYGYCL--D 973
Query: 281 CRHNTAGKDCEKCKPFF 297
C+HNT G CE+CKP F
Sbjct: 974 CQHNTEGDQCERCKPGF 990
Score = 144 (55.7 bits), Expect = 4.6e-06, P = 4.6e-06
Identities = 38/106 (35%), Positives = 51/106 (48%)
Query: 202 CKCNGHASRCIKSPQGELVCECRHNTAGKDCEKCKPFFSDRPWGRATVYDANECKGGRCK 261
C CN H+ R S L+CE HNT G CE+CK + +G AT +C C
Sbjct: 1011 CHCNNHSPRGCDSFGRCLLCE--HNTEGTHCERCKKGY----YGDATKGSPYDCTP--CP 1062
Query: 262 CNGHASRCIKSPQGALVCE-CRHNTAGKDCEKCKPFF--SDRPWGR 304
C G AS C +G + C C G+ C +C P + S++P GR
Sbjct: 1063 CPG-ASDCYLDNEGQVACRICPAGLQGRLCNECAPGYTRSNKPAGR 1107
Score = 41 (19.5 bits), Expect = 1.5e-05, Sum P(2) = 1.5e-05
Identities = 12/35 (34%), Positives = 16/35 (45%)
Query: 191 CTDRHKKQGGRC-KCNGHASRCI-KSPQGELVCEC 223
C + + G C +C A KSP+G L C C
Sbjct: 400 CECKSQVTGPNCDQCKPGAFHLSEKSPEGCLKCFC 434
>UNIPROTKB|E1BP05 [details] [associations]
symbol:USH2A "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0060171 "stereocilium membrane" evidence=IEA]
[GO:0060113 "inner ear receptor cell differentiation" evidence=IEA]
[GO:0048496 "maintenance of organ identity" evidence=IEA]
[GO:0045494 "photoreceptor cell maintenance" evidence=IEA]
[GO:0035315 "hair cell differentiation" evidence=IEA] [GO:0017022
"myosin binding" evidence=IEA] [GO:0016324 "apical plasma membrane"
evidence=IEA] [GO:0007605 "sensory perception of sound"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005604
"basement membrane" evidence=IEA] [GO:0005518 "collagen binding"
evidence=IEA] [GO:0002142 "stereocilia ankle link complex"
evidence=IEA] InterPro:IPR003961 Pfam:PF00041 PROSITE:PS50853
SMART:SM00060 GO:GO:0005737 Gene3D:2.60.40.10 InterPro:IPR013783
GO:GO:0016324 SUPFAM:SSF49265 GO:GO:0045494 Gene3D:2.60.120.200
InterPro:IPR008985 InterPro:IPR013320 SUPFAM:SSF49899 GO:GO:0007605
InterPro:IPR002049 InterPro:IPR001791 Pfam:PF00053 SMART:SM00180
SMART:SM00282 PROSITE:PS01248 PROSITE:PS50027 PROSITE:PS50025
GO:GO:0005604 GO:GO:0060113 Pfam:PF02210 GO:GO:0032421
InterPro:IPR008211 Pfam:PF00055 SMART:SM00136 PROSITE:PS51117
GO:GO:0002142 GO:GO:0048496 GeneTree:ENSGT00700000104042
InterPro:IPR006558 SMART:SM00560 OMA:EIRIQAC InterPro:IPR026915
PANTHER:PTHR10574:SF53 EMBL:DAAA02042466 EMBL:DAAA02042467
EMBL:DAAA02042468 EMBL:DAAA02042469 EMBL:DAAA02042470
EMBL:DAAA02042471 EMBL:DAAA02042472 EMBL:DAAA02042473
EMBL:DAAA02042474 EMBL:DAAA02042475 EMBL:DAAA02042476
EMBL:DAAA02042477 EMBL:DAAA02042478 EMBL:DAAA02042479
EMBL:DAAA02042480 EMBL:DAAA02042481 EMBL:DAAA02042482
EMBL:DAAA02042483 IPI:IPI00924139 Ensembl:ENSBTAT00000061112
Uniprot:E1BP05
Length = 5204
Score = 186 (70.5 bits), Expect = 2.8e-13, Sum P(3) = 2.8e-13
Identities = 41/111 (36%), Positives = 59/111 (53%)
Query: 200 GRCKCNGHASRCIKSPQG-ELVCECRHNTAGKDCEKCKPFFSDRPWGRATVYDANECKGG 258
GRC+C GHA+ C + Q +C T G C++C P ++++P+ ++ A CK
Sbjct: 516 GRCQCYGHANHCDTTSQPYRCLCSQESFTEGLHCDRCLPLYNNKPFRQSDHVHAFNCKP- 574
Query: 259 RCKCNGHASRC---IK-SP-------QGALVCE-CRHNTAGKDCEKCKPFF 297
C+CN H+ C I P G VC+ C HNTAGK+CE CK +F
Sbjct: 575 -CECNSHSRSCHYNISVDPFPFEHYRGGGGVCDDCEHNTAGKNCELCKDYF 624
Score = 131 (51.2 bits), Expect = 9.9e-07, Sum P(3) = 9.9e-07
Identities = 34/114 (29%), Positives = 52/114 (45%)
Query: 202 CKCNGHASRC---IK-SP-------QGELVCE-CRHNTAGKDCEKCKPFFSDRPWGRATV 249
C+CN H+ C I P G VC+ C HNTAGK+CE CK +F + +
Sbjct: 575 CECNSHSRSCHYNISVDPFPFEHYRGGGGVCDDCEHNTAGKNCELCKDYFFRQVGADPSA 634
Query: 250 YDANECKGGRCKCNGHASRCIKSPQGALVCECRHNTAGKDCEKCKP-FFSDRPW 302
D C+ C G + Q C C+ + +G+ C +C+ F++ + W
Sbjct: 635 IDV--CRPCDCDKVGTRNSSFLCDQIGGQCNCKRHVSGRQCNQCQNGFYNLQEW 686
Score = 110 (43.8 bits), Expect = 0.00020, Sum P(3) = 0.00020
Identities = 23/71 (32%), Positives = 36/71 (50%)
Query: 246 RATVYDANECK-GGRCKCNGHASRCIKSPQG-ALVCECRHNTAGKDCEKCKPFFSDRPWG 303
R Y NE GRC+C GHA+ C + Q +C T G C++C P ++++P+
Sbjct: 503 RHRYYGVNEITITGRCQCYGHANHCDTTSQPYRCLCSQESFTEGLHCDRCLPLYNNKPFR 562
Query: 304 RATVYDANECK 314
++ A CK
Sbjct: 563 QSDHVHAFNCK 573
Score = 105 (42.0 bits), Expect = 0.00071, Sum P(3) = 0.00071
Identities = 31/107 (28%), Positives = 44/107 (41%)
Query: 202 CKCNGHAS--RCIKSPQGELVCECRHNTAGKDCEKCKPFFSDRPWGRATVYDANECKGGR 259
C+CN H S R G+ CEC+ G C+ C+ F +G DA CK
Sbjct: 747 CQCNLHGSVNRLCNPLSGQ--CECKKEAKGLQCDTCREHF----YG----LDATGCKA-- 794
Query: 260 CKCNGHASRC-IKSPQGALVCECRHNTAGKDCEKCKPFFSDRPWGRA 305
C C+ SR C C+ N G+ C +C + +P R+
Sbjct: 795 CDCDVAGSRPGTVCDAWTGQCVCKPNVGGRRCSECVEGYFYQPQNRS 841
Score = 82 (33.9 bits), Expect = 2.8e-13, Sum P(3) = 2.8e-13
Identities = 21/79 (26%), Positives = 42/79 (53%)
Query: 93 NPSNV-TCWRSEAQTSVNSLSASPDNVTLTLSLGK-KFELTYISLSFCPKSIKPDSLAIY 150
N +NV T W S T++ LS VT+++ L ++++ YI + F S +P ++ I
Sbjct: 346 NDNNVGTSWVSHVFTNMTQLS---QGVTISIDLENGQYQVFYIIIQF--SSPQPTAVRIQ 400
Query: 151 KSQDFGKSWQPLQFYSSQC 169
+ ++ W+ Q+++ C
Sbjct: 401 RKKEDSLDWEDWQYFARNC 419
Score = 38 (18.4 bits), Expect = 2.8e-13, Sum P(3) = 2.8e-13
Identities = 9/33 (27%), Positives = 16/33 (48%)
Query: 39 PDFVNAAFGQEVKV---NSVCGLESPERYCDTS 68
P N A ++V V + CG+ + +C +S
Sbjct: 38 PRLENVAAFKKVSVVPTQATCGIPAQSTFCQSS 70
>UNIPROTKB|F1NZ77 [details] [associations]
symbol:USH2A "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0002142 "stereocilia ankle link complex" evidence=IEA]
[GO:0005518 "collagen binding" evidence=IEA] [GO:0005604 "basement
membrane" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0007605 "sensory perception of sound" evidence=IEA] [GO:0016324
"apical plasma membrane" evidence=IEA] [GO:0017022 "myosin binding"
evidence=IEA] [GO:0035315 "hair cell differentiation" evidence=IEA]
[GO:0045494 "photoreceptor cell maintenance" evidence=IEA]
[GO:0048496 "maintenance of organ identity" evidence=IEA]
[GO:0060113 "inner ear receptor cell differentiation" evidence=IEA]
[GO:0060171 "stereocilium membrane" evidence=IEA]
InterPro:IPR003961 Pfam:PF00041 PROSITE:PS50853 SMART:SM00060
GO:GO:0005737 Gene3D:2.60.40.10 InterPro:IPR013783 GO:GO:0016324
SUPFAM:SSF49265 Gene3D:2.60.120.200 InterPro:IPR008985
InterPro:IPR013320 SUPFAM:SSF49899 InterPro:IPR002049
InterPro:IPR001791 Pfam:PF00053 SMART:SM00180 SMART:SM00282
PROSITE:PS01248 PROSITE:PS50027 PROSITE:PS50025 GO:GO:0005604
Pfam:PF02210 GO:GO:0032421 InterPro:IPR008211 Pfam:PF00055
SMART:SM00136 PROSITE:PS51117 GO:GO:0002142
GeneTree:ENSGT00700000104042 OMA:EIRIQAC InterPro:IPR026915
PANTHER:PTHR10574:SF53 EMBL:AADN02012097 EMBL:AADN02012098
EMBL:AADN02012099 EMBL:AADN02012100 EMBL:AADN02012101
EMBL:AADN02012102 EMBL:AADN02012103 IPI:IPI00599063
Ensembl:ENSGALT00000015728 ArrayExpress:F1NZ77 Uniprot:F1NZ77
Length = 5217
Score = 168 (64.2 bits), Expect = 5.2e-12, Sum P(2) = 5.2e-12
Identities = 39/110 (35%), Positives = 55/110 (50%)
Query: 200 GRCKCNGHASRCIKSPQG-ELVCECRHNTAGKDCEKCKPFFSDRPWGRATVYDANECKGG 258
GRC C+GHA C + + +C T G C++C P ++D+P+ A CK
Sbjct: 515 GRCNCHGHADNCDTAMEPYRCLCIKESYTEGIQCDRCLPLYNDKPFRPGDQVHAYNCKP- 573
Query: 259 RCKCNGHASRCIKS------PQ----GAL-VCE-CRHNTAGKDCEKCKPF 296
C+C HA C PQ G+ VC+ C+HNT G++CE CK F
Sbjct: 574 -CQCYSHAVSCHYDLEMDPFPQEYYRGSGGVCDNCQHNTTGRNCELCKDF 622
Score = 120 (47.3 bits), Expect = 1.4e-06, Sum P(2) = 1.4e-06
Identities = 30/108 (27%), Positives = 46/108 (42%)
Query: 202 CKCNGHASRCIKS------PQGEL-----VCE-CRHNTAGKDCEKCKPFFSDRPWGRATV 249
C+C HA C PQ VC+ C+HNT G++CE CK F + +
Sbjct: 574 CQCYSHAVSCHYDLEMDPFPQEYYRGSGGVCDNCQHNTTGRNCELCKDFHYRQAGADLSA 633
Query: 250 YDANECKGGRCKCNGHASRCIKSPQGALVCECRHNTAGKDCEKCKPFF 297
D CK C G ++ + C C+ + +G+ C +C+ F
Sbjct: 634 IDV--CKPCDCYATGTKNKSLLCDNIGGQCNCKRHVSGRQCNQCQEGF 679
Score = 111 (44.1 bits), Expect = 1.4e-05, Sum P(2) = 1.4e-05
Identities = 25/72 (34%), Positives = 32/72 (44%)
Query: 246 RATVYDANECK-GGRCKCNGHASRC--IKSPQGALVCECRHNTAGKDCEKCKPFFSDRPW 302
R Y NE GRC C+GHA C P L C T G C++C P ++D+P+
Sbjct: 502 RHRYYGVNEVTVSGRCNCHGHADNCDTAMEPYRCL-CIKESYTEGIQCDRCLPLYNDKPF 560
Query: 303 GRATVYDANECK 314
A CK
Sbjct: 561 RPGDQVHAYNCK 572
Score = 94 (38.1 bits), Expect = 0.00096, Sum P(2) = 0.00096
Identities = 29/116 (25%), Positives = 50/116 (43%)
Query: 190 LCTDRHKKQGGR-------CK-CNGHASRCI-KSPQGELV---CECRHNTAGKDCEKCKP 237
LC D H +Q G CK C+ +A+ KS + + C C+ + +G+ C +C+
Sbjct: 618 LCKDFHYRQAGADLSAIDVCKPCDCYATGTKNKSLLCDNIGGQCNCKRHVSGRQCNQCQE 677
Query: 238 FFSDRPWGRATVYDANECKGGRCKCNGHASRCIKSPQGALVCECRHNTAGKDCEKC 293
F + + + C C +G + I Q + C+C+ N G C+ C
Sbjct: 678 GFYNLQQS-----NPDGCSPCNCNTSGTVNGDITCHQNSGQCKCKANVIGPRCDSC 728
Score = 84 (34.6 bits), Expect = 5.2e-12, Sum P(2) = 5.2e-12
Identities = 29/129 (22%), Positives = 57/129 (44%)
Query: 62 ERYCDTSGACHVCDAGSPRGRFPAEYLTDLNNPSNVTCWRSEAQTSVNSLSASPDNVTLT 121
+RYC +GA + R A L +N+ T W S + L ++T+
Sbjct: 315 QRYCIPNGADDTTNDRVLRLDAEAHPLYYINDDDIGTTWISSVFANAAGLDHGV-SITID 373
Query: 122 LSLGKKFELTYISLSFCPKSIKPDSLAIYKSQDFGKSWQPLQFYSSQCKKLYGRTATGVI 181
L G+ +++ YI L F S P+++ I + + +W+ Q+++ C ++G G +
Sbjct: 374 LQNGQ-YQVFYIILQFF--SPHPEAIRIERKKRDDLNWEDWQYFAKNCS-IFGMDNNGSL 429
Query: 182 SRGNEQEAL 190
+ + L
Sbjct: 430 EKPDSVNCL 438
>UNIPROTKB|Q5THA1 [details] [associations]
symbol:LAMB3 "Laminin subunit beta-3" species:9606 "Homo
sapiens" [GO:0005610 "laminin-5 complex" evidence=IEA] [GO:0050873
"brown fat cell differentiation" evidence=IEA] GO:GO:0050873
EMBL:AL031316 InterPro:IPR008211 Pfam:PF00055 SMART:SM00136
PROSITE:PS51117 EMBL:AL023754 GO:GO:0005610 UniGene:Hs.497636
HGNC:HGNC:6490 ChiTaRS:LAMB3 HOVERGEN:HBG092822 IPI:IPI00478330
SMR:Q5THA1 STRING:Q5THA1 Ensembl:ENST00000415782
HOGENOM:HOG000168985 Uniprot:Q5THA1
Length = 188
Score = 150 (57.9 bits), Expect = 3.1e-10, P = 3.1e-10
Identities = 41/149 (27%), Positives = 67/149 (44%)
Query: 37 CIPDFVNAAFGQE--VKVNSVCGLESPERYCDTSGA----CHVCDAGSPRGRFPAEYLTD 90
C P + G+ ++ +S CGL PE YC G C CD+ P +
Sbjct: 26 CYPPVGDLLVGRTRFLRASSTCGLTKPETYCTQYGEWQMKCCKCDSRQPHNYYSHRVENV 85
Query: 91 LNNPSNVTCWRSEAQTSVNSLSASPDNVTLTLSLGKKFELTYISLSFCPKSIKPDSLAIY 150
++ + W+S Q VN P V+L L L ++F+L + + F + P + I
Sbjct: 86 ASSSGPMRWWQS--QNDVN-----P--VSLQLDLDRRFQLQEVMMEF--QGPMPAGMLIE 134
Query: 151 KSQDFGKSWQPLQFYSSQCKKLYGRTATG 179
+S DFGK+W+ Q+ ++ C + R G
Sbjct: 135 RSSDFGKTWRVYQYLAADCTSTFPRVRQG 163
>UNIPROTKB|F8W0I7 [details] [associations]
symbol:NTN4 "Netrin-4" species:9606 "Homo sapiens"
[GO:0016322 "neuron remodeling" evidence=IEA] [GO:0043237
"laminin-1 binding" evidence=IEA] [GO:0060668 "regulation of
branching involved in salivary gland morphogenesis by extracellular
matrix-epithelial cell signaling" evidence=IEA] GO:GO:0016322
GO:GO:0005604 InterPro:IPR008211 Pfam:PF00055 SMART:SM00136
PROSITE:PS51117 HGNC:HGNC:13658 ChiTaRS:NTN4 GO:GO:0060668
EMBL:AC008128 EMBL:AC090001 IPI:IPI01022535
ProteinModelPortal:F8W0I7 SMR:F8W0I7 Ensembl:ENST00000547980
ArrayExpress:F8W0I7 Bgee:F8W0I7 Uniprot:F8W0I7
Length = 176
Score = 135 (52.6 bits), Expect = 1.4e-08, P = 1.4e-08
Identities = 41/163 (25%), Positives = 75/163 (46%)
Query: 43 NAAFGQEVKVNSVCGLESPERYCDTSG---------ACHVCDAGSPR-GRFPAEYLTDLN 92
N A G+++ ++ CG + E YC S C C+A P P+ + D +
Sbjct: 3 NLALGRKLWADTTCGQNATELYCFYSENTDLTCRQPKCDKCNAAYPHLAHLPSA-MADSS 61
Query: 93 NPSNVTCWRSEAQTSVNSLSASPDNVTLTLSLGKKFELTYISLSFCPKSIKPDSLAIYKS 152
T W+S + L L +F T++ + F KS +P ++ + +S
Sbjct: 62 FRFPRTWWQSAEDVHREKIQ---------LDLEAEFYFTHLIVMF--KSPRPAAMVLDRS 110
Query: 153 QDFGKSWQPLQFYSSQCKKLYGRTATGVISRGNEQEALCTDRH 195
QDFGK+W+P +++++ C +G V+ +G A+CT ++
Sbjct: 111 QDFGKTWKPYKYFATNCSATFG-LEDDVVKKG----AICTSKY 148
>UNIPROTKB|F1NQC4 [details] [associations]
symbol:F1NQC4 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0007409 "axonogenesis" evidence=IEA]
[GO:0046658 "anchored to plasma membrane" evidence=IEA]
InterPro:IPR000742 PROSITE:PS50026 SMART:SM00181 InterPro:IPR013032
PROSITE:PS00022 PROSITE:PS01186 InterPro:IPR002049 Pfam:PF00053
SMART:SM00180 PROSITE:PS01248 PROSITE:PS50027 GO:GO:0046658
GeneTree:ENSGT00700000104042 EMBL:AADN02026516 IPI:IPI00578210
Ensembl:ENSGALT00000005827 OMA:ALADCEC Uniprot:F1NQC4
Length = 175
Score = 133 (51.9 bits), Expect = 2.4e-08, P = 2.4e-08
Identities = 34/99 (34%), Positives = 47/99 (47%)
Query: 202 CKCNGHASRCIKSPQGELV-C-ECRHNTAGKDCEKCKPFFSDRPWGRATVYDANECKGGR 259
C+C GH++RC +V C C+HNT G+ C+ C+ F A + D N C
Sbjct: 2 CECYGHSNRCSYIDFLNVVTCVSCKHNTRGQHCQHCRLGFYRN--SSAELDDENVCI--E 57
Query: 260 CKCNGHAS---RCIKSPQGALVCECRHNTAGKDCEKCKP 295
C CN S RC ++ G CEC+ G C+ C P
Sbjct: 58 CNCNQIGSLHDRCNET--G--YCECKEGATGPKCDDCLP 92
>RGD|628776 [details] [associations]
symbol:Lama3 "laminin, alpha 3" species:10116 "Rattus norvegicus"
[GO:0005515 "protein binding" evidence=IPI] [GO:0005604 "basement
membrane" evidence=ISO] [GO:0005608 "laminin-3 complex"
evidence=IDA] [GO:0005610 "laminin-5 complex" evidence=ISO]
[GO:0005913 "cell-cell adherens junction" evidence=IDA] [GO:0016337
"cell-cell adhesion" evidence=IMP] [GO:0030056 "hemidesmosome"
evidence=IDA] [GO:0031581 "hemidesmosome assembly" evidence=IMP]
InterPro:IPR009254 InterPro:IPR010307 Pfam:PF06008 Pfam:PF06009
RGD:628776 GO:GO:0030155 Gene3D:2.60.120.200 InterPro:IPR008985
InterPro:IPR013320 SUPFAM:SSF49899 GO:GO:0005913 GO:GO:0030334
GO:GO:0016337 InterPro:IPR002049 InterPro:IPR001791 Pfam:PF00053
Pfam:PF00054 SMART:SM00180 SMART:SM00282 PROSITE:PS01248
PROSITE:PS50027 PROSITE:PS50025 GO:GO:0030056 Pfam:PF02210
GO:GO:0031581 GO:GO:0045995 eggNOG:NOG292643 GO:GO:0005606
GO:GO:0005608 HOGENOM:HOG000048708 HOVERGEN:HBG100777 EMBL:U61261
IPI:IPI00189741 UniGene:Rn.10597 HSSP:P35070
ProteinModelPortal:P70570 STRING:P70570 PRIDE:P70570
UCSC:RGD:628776 NextBio:657622 Genevestigator:P70570 Uniprot:P70570
Length = 1725
Score = 161 (61.7 bits), Expect = 2.8e-08, P = 2.8e-08
Identities = 37/102 (36%), Positives = 53/102 (51%)
Query: 202 CKCNGHASRCIKSPQGELVC-ECRHNTAGKDCEKCKPFFSDRPWGRATVYDANECKGGRC 260
C CNGH++RC G VC C+HNTAG+ CE+CK + +G A ++ + C+ C
Sbjct: 78 CNCNGHSNRC---QDGSGVCINCQHNTAGEHCERCKRGY----YGSA-IHGS--CRVCPC 127
Query: 261 K-CNGHASRCIKSPQGALVCECRHNTAGKDCEKCKPFFSDRP 301
N A+ C GA+ C C+ G CE+C P + P
Sbjct: 128 PHTNSFATGCAVDG-GAVRCACKPGYTGAQCERCAPGYFGNP 168
>ZFIN|ZDB-GENE-080807-4 [details] [associations]
symbol:hspg2 "heparan sulfate proteoglycan 2"
species:7955 "Danio rerio" [GO:0007519 "skeletal muscle tissue
development" evidence=IMP] [GO:0001525 "angiogenesis" evidence=IMP]
InterPro:IPR000742 InterPro:IPR002172 InterPro:IPR007110
Pfam:PF00008 Pfam:PF00057 PROSITE:PS50026 PROSITE:PS50068
PROSITE:PS50835 SMART:SM00181 SMART:SM00192 ZFIN:ZDB-GENE-080807-4
Gene3D:2.60.40.10 InterPro:IPR013783 InterPro:IPR003599
SMART:SM00409 InterPro:IPR003598 SMART:SM00408 GO:GO:0001525
InterPro:IPR013032 PROSITE:PS00022 Gene3D:2.60.120.200
InterPro:IPR008985 InterPro:IPR013320 SUPFAM:SSF49899
PROSITE:PS01186 Gene3D:4.10.400.10 InterPro:IPR023415
SUPFAM:SSF57424 PROSITE:PS01209 InterPro:IPR002049
InterPro:IPR001791 InterPro:IPR000082 Pfam:PF00053 Pfam:PF00054
SMART:SM00180 SMART:SM00282 PROSITE:PS01248 PROSITE:PS50027
PROSITE:PS50025 PROSITE:PS50024 GeneTree:ENSGT00530000063501
InterPro:IPR013098 Pfam:PF07679 InterPro:IPR009030 SUPFAM:SSF57184
Pfam:PF02210 GO:GO:0007519 Pfam:PF12661 InterPro:IPR018031
InterPro:IPR000034 Pfam:PF00052 SMART:SM00281 PROSITE:PS51115
EMBL:CR936463 EMBL:CR855310 IPI:IPI00889358
Ensembl:ENSDART00000111029 Bgee:F1RCP6 Uniprot:F1RCP6
Length = 3422
Score = 169 (64.5 bits), Expect = 3.6e-08, Sum P(2) = 3.6e-08
Identities = 40/106 (37%), Positives = 47/106 (44%)
Query: 202 CKCNGHASRCIKSPQGELVCECRHNTAGKDCEKCKP-FFSDRPWGRATVYDANECKGGRC 260
C CNGHAS C P C+H T G CEKCKP FF D G+ YD +CK C
Sbjct: 688 CNCNGHASAC--DPVSGHCLSCQHKTEGAQCEKCKPGFFGDPSRGQ---YD--DCKPCPC 740
Query: 261 KCNGHASR----CIKSPQGALVCE-CRHNTAGKDCEKCKPFFSDRP 301
+ R C C+ CR G+ CEKC P + P
Sbjct: 741 PYTETSRRFSDTCFLDHDNQATCDACREGYTGRRCEKCAPGYVGNP 786
Score = 161 (61.7 bits), Expect = 3.0e-07, Sum P(2) = 3.0e-07
Identities = 36/105 (34%), Positives = 48/105 (45%)
Query: 201 RCKCNGHASRCIKSPQGELVCECRHNTAGKDCEKCKPFFSDRPWGRATVYDANECKGGRC 260
+C+C+GHAS C S G+ + C HNT G+ CE C + +G D C+ C
Sbjct: 1080 KCECHGHASSC-DSETGDCL-NCLHNTIGRRCENCISGY----YGNPKTGDPQACRP--C 1131
Query: 261 KCNGHASR----CIKSPQGALVCECRHNTAGKDCEKCKPFFSDRP 301
C G S C G VCEC G+ CE+C P + P
Sbjct: 1132 PCLGQTSNQPSSCYLGSDGQPVCECPAGYTGRRCERCAPGYIGNP 1176
Score = 157 (60.3 bits), Expect = 8.8e-07, Sum P(2) = 8.8e-07
Identities = 38/95 (40%), Positives = 43/95 (45%)
Query: 221 CECRHNTAGKDCEKCKPFFSDRPWGRATVYDANECKGGRCKCNGHASRCIKSPQGALVCE 280
C C +G CE C P F P + C G C CNGHAS C P
Sbjct: 656 CRCPAGYSGLSCESCSPGFERVPGPYLGI-----CAG--CNCNGHASAC--DPVSGHCLS 706
Query: 281 CRHNTAGKDCEKCKP-FFSDRPWGRATVYDANECK 314
C+H T G CEKCKP FF D G+ YD +CK
Sbjct: 707 CQHKTEGAQCEKCKPGFFGDPSRGQ---YD--DCK 736
Score = 137 (53.3 bits), Expect = 0.00016, Sum P(2) = 0.00016
Identities = 33/97 (34%), Positives = 44/97 (45%)
Query: 202 CKCNGHASRCIKSPQGELVCECRHNTAGKDCEKCKP-FFSDRPWGRATVYDANECK-GGR 259
C+CNGH+ C P+ + C+HNT G+ CE+C FF D G T D C G
Sbjct: 1481 CECNGHSDTC--HPETGICTNCQHNTKGELCEQCVDGFFGDPTAG--TPEDCQPCACPGT 1536
Query: 260 CKCNGHASRCIKSPQGALVCE-CRHNTAGKDCEKCKP 295
N + C G C C+ G+ CE+C P
Sbjct: 1537 DPENQFSRTCESLGNGGYQCTACQPGYLGQYCERCAP 1573
Score = 42 (19.8 bits), Expect = 3.6e-08, Sum P(2) = 3.6e-08
Identities = 9/24 (37%), Positives = 10/24 (41%)
Query: 191 CTDRHKKQGGRCK---CNGHASRC 211
C D H GG C C G +C
Sbjct: 431 CRDGHFSVGGHCMPCFCFGITKKC 454
>UNIPROTKB|E9PTR0 [details] [associations]
symbol:E9PTR0 "Uncharacterized protein" species:10116
"Rattus norvegicus" [GO:0005102 "receptor binding" evidence=IEA]
[GO:0005606 "laminin-1 complex" evidence=IEA] [GO:0007155 "cell
adhesion" evidence=IEA] [GO:0030155 "regulation of cell adhesion"
evidence=IEA] [GO:0030334 "regulation of cell migration"
evidence=IEA] [GO:0045995 "regulation of embryonic development"
evidence=IEA] InterPro:IPR009254 InterPro:IPR010307 Pfam:PF06008
Pfam:PF06009 GO:GO:0030155 GO:GO:0007155 Gene3D:2.60.120.200
InterPro:IPR008985 InterPro:IPR013320 SUPFAM:SSF49899 GO:GO:0030334
InterPro:IPR002049 InterPro:IPR001791 Pfam:PF00053 Pfam:PF00054
SMART:SM00180 SMART:SM00282 PROSITE:PS01248 PROSITE:PS50027
PROSITE:PS50025 Pfam:PF02210 GO:GO:0045995 GO:GO:0005606
IPI:IPI00568879 Ensembl:ENSRNOT00000052028 ArrayExpress:E9PTR0
Uniprot:E9PTR0
Length = 1622
Score = 158 (60.7 bits), Expect = 5.6e-08, P = 5.6e-08
Identities = 36/102 (35%), Positives = 53/102 (51%)
Query: 202 CKCNGHASRCIKSPQGELVC-ECRHNTAGKDCEKCKPFFSDRPWGRATVYDANECKGGRC 260
C CNGH++RC G VC C+HNTAG+ CE+C+ + +G A ++ + C+ C
Sbjct: 64 CNCNGHSNRC---QDGSGVCINCQHNTAGEHCERCQEGY----YGSA-IHGS--CRVCPC 113
Query: 261 K-CNGHASRCIKSPQGALVCECRHNTAGKDCEKCKPFFSDRP 301
N A+ C GA+ C C+ G CE+C P + P
Sbjct: 114 PHTNSFATGCAVDG-GAVRCACKPGYTGAQCERCAPGYFGNP 154
>UNIPROTKB|Q6VU69 [details] [associations]
symbol:LAMA3 "Laminin subunit alpha-3" species:9606 "Homo
sapiens" [GO:0005102 "receptor binding" evidence=IEA] [GO:0005606
"laminin-1 complex" evidence=IEA] [GO:0007155 "cell adhesion"
evidence=IEA] [GO:0030155 "regulation of cell adhesion"
evidence=IEA] [GO:0030334 "regulation of cell migration"
evidence=IEA] [GO:0045995 "regulation of embryonic development"
evidence=IEA] InterPro:IPR009254 InterPro:IPR010307 Pfam:PF06008
Pfam:PF06009 GO:GO:0030155 GO:GO:0007155 Gene3D:2.60.120.200
InterPro:IPR008985 InterPro:IPR013320 SUPFAM:SSF49899 GO:GO:0030334
InterPro:IPR002049 InterPro:IPR001791 Pfam:PF00053 SMART:SM00180
SMART:SM00282 PROSITE:PS01248 PROSITE:PS50027 PROSITE:PS50025
Pfam:PF02210 GO:GO:0045995 GO:GO:0005606 EMBL:AC010754
EMBL:AC067796 EMBL:AC090366 UniGene:Hs.436367 DNASU:3909
GeneID:3909 KEGG:hsa:3909 CTD:3909 HGNC:HGNC:6483 PharmGKB:PA30272
KO:K06240 ChiTaRS:LAMA3 GenomeRNAi:3909 NextBio:15345
HOVERGEN:HBG100777 EMBL:AY327114 IPI:IPI00895830
RefSeq:NP_001121190.1 ProteinModelPortal:Q6VU69 STRING:Q6VU69
PRIDE:Q6VU69 Ensembl:ENST00000587184 UCSC:uc002kut.4
ArrayExpress:Q6VU69 Bgee:Q6VU69 Uniprot:Q6VU69
Length = 1668
Score = 158 (60.7 bits), Expect = 5.8e-08, P = 5.8e-08
Identities = 34/102 (33%), Positives = 54/102 (52%)
Query: 202 CKCNGHASRCIKSPQGELVC-ECRHNTAGKDCEKCKPFFSDRPWGRATVYDANECKGGRC 260
C CNGH+++C G +C C+HNTAG+ CE+C+ + +G A V+ + C+ C
Sbjct: 78 CNCNGHSNQC---QDGSGICVNCQHNTAGEHCERCQEGY----YGNA-VHGS--CRACPC 127
Query: 261 K-CNGHASRCIKSPQGALVCECRHNTAGKDCEKCKPFFSDRP 301
N A+ C+ + G + C C+ G CE+C P + P
Sbjct: 128 PHTNSFATGCVVNG-GDVRCSCKAGYTGTQCERCAPGYFGNP 168
>UNIPROTKB|B0YJ33 [details] [associations]
symbol:LAMA3 "Laminin subunit alpha-3" species:9606 "Homo
sapiens" [GO:0005102 "receptor binding" evidence=IEA] [GO:0005606
"laminin-1 complex" evidence=IEA] [GO:0007155 "cell adhesion"
evidence=IEA] [GO:0030155 "regulation of cell adhesion"
evidence=IEA] [GO:0030334 "regulation of cell migration"
evidence=IEA] [GO:0045995 "regulation of embryonic development"
evidence=IEA] InterPro:IPR009254 InterPro:IPR010307 Pfam:PF06008
Pfam:PF06009 GO:GO:0030155 GO:GO:0007155 Gene3D:2.60.120.200
InterPro:IPR008985 InterPro:IPR013320 SUPFAM:SSF49899 GO:GO:0030334
InterPro:IPR002049 InterPro:IPR001791 Pfam:PF00053 SMART:SM00180
SMART:SM00282 PROSITE:PS01248 PROSITE:PS50027 PROSITE:PS50025
Pfam:PF02210 GO:GO:0045995 GO:GO:0005606 EMBL:AC010754
EMBL:AC067796 EMBL:AC090366 IPI:IPI00790908 RefSeq:NP_000218.2
UniGene:Hs.436367 DNASU:3909 GeneID:3909 KEGG:hsa:3909 CTD:3909
HGNC:HGNC:6483 PharmGKB:PA30272 KO:K06240 ChiTaRS:LAMA3
GenomeRNAi:3909 NextBio:15345 HOGENOM:HOG000048708 EMBL:EF444992
STRING:B0YJ33 Ensembl:ENST00000269217 UCSC:uc002kus.4
HOVERGEN:HBG100777 Uniprot:B0YJ33
Length = 1724
Score = 158 (60.7 bits), Expect = 6.0e-08, P = 6.0e-08
Identities = 34/102 (33%), Positives = 54/102 (52%)
Query: 202 CKCNGHASRCIKSPQGELVC-ECRHNTAGKDCEKCKPFFSDRPWGRATVYDANECKGGRC 260
C CNGH+++C G +C C+HNTAG+ CE+C+ + +G A V+ + C+ C
Sbjct: 78 CNCNGHSNQC---QDGSGICVNCQHNTAGEHCERCQEGY----YGNA-VHGS--CRACPC 127
Query: 261 K-CNGHASRCIKSPQGALVCECRHNTAGKDCEKCKPFFSDRP 301
N A+ C+ + G + C C+ G CE+C P + P
Sbjct: 128 PHTNSFATGCVVNG-GDVRCSCKAGYTGTQCERCAPGYFGNP 168
>MGI|MGI:96257 [details] [associations]
symbol:Hspg2 "perlecan (heparan sulfate proteoglycan 2)"
species:10090 "Mus musculus" [GO:0001525 "angiogenesis"
evidence=IEA] [GO:0001958 "endochondral ossification" evidence=IMP]
[GO:0002062 "chondrocyte differentiation" evidence=IMP] [GO:0005515
"protein binding" evidence=IPI] [GO:0005576 "extracellular region"
evidence=IEA] [GO:0005578 "proteinaceous extracellular matrix"
evidence=IDA] [GO:0005604 "basement membrane" evidence=IDA]
[GO:0005605 "basal lamina" evidence=IDA] [GO:0005615 "extracellular
space" evidence=ISO] [GO:0007420 "brain development" evidence=IMP]
[GO:0008022 "protein C-terminus binding" evidence=ISO] [GO:0008104
"protein localization" evidence=IMP] [GO:0030198 "extracellular
matrix organization" evidence=IMP] [GO:0031012 "extracellular
matrix" evidence=IDA] [GO:0046872 "metal ion binding" evidence=IEA]
[GO:0048704 "embryonic skeletal system morphogenesis" evidence=IMP]
[GO:0048738 "cardiac muscle tissue development" evidence=IMP]
[GO:0060351 "cartilage development involved in endochondral bone
morphogenesis" evidence=IMP] [GO:0070062 "extracellular vesicular
exosome" evidence=ISO] Reactome:REACT_112621 InterPro:IPR000742
InterPro:IPR002172 InterPro:IPR007110 Pfam:PF00008 Pfam:PF00057
PROSITE:PS50026 PROSITE:PS50068 PROSITE:PS50835 SMART:SM00181
SMART:SM00192 MGI:MGI:96257 GO:GO:0008104 GO:GO:0007420
Gene3D:2.60.40.10 InterPro:IPR013783 GO:GO:0046872
InterPro:IPR003599 SMART:SM00409 InterPro:IPR003598 SMART:SM00408
GO:GO:0030198 GO:GO:0001525 InterPro:IPR013032 PROSITE:PS00022
GO:GO:0048738 Gene3D:2.60.120.200 InterPro:IPR008985
InterPro:IPR013320 SUPFAM:SSF49899 GO:GO:0005605 PROSITE:PS01186
Reactome:REACT_118324 Gene3D:4.10.400.10 InterPro:IPR023415
SUPFAM:SSF57424 PROSITE:PS01209 InterPro:IPR002049
InterPro:IPR001791 InterPro:IPR000082 Pfam:PF00053 Pfam:PF00054
SMART:SM00180 SMART:SM00282 SMART:SM00200 PROSITE:PS01248
PROSITE:PS50027 PROSITE:PS50025 PROSITE:PS50024 GO:GO:0005796
InterPro:IPR013098 Pfam:PF07679 GO:GO:0048704 GO:GO:0002062
GO:GO:0001958 Pfam:PF02210 GO:GO:0060351 InterPro:IPR018031
InterPro:IPR000034 Pfam:PF00052 SMART:SM00281 PROSITE:PS51115
PDB:1GL4 PDBsum:1GL4 CTD:3339 eggNOG:NOG258321 HOGENOM:HOG000049276
HOVERGEN:HBG008174 KO:K06255 EMBL:M77174 EMBL:J04054 EMBL:J04055
IPI:IPI00113824 PIR:S18252 RefSeq:NP_032331.2 UniGene:Mm.273662
ProteinModelPortal:Q05793 SMR:Q05793 IntAct:Q05793 MINT:MINT-215413
STRING:Q05793 PhosphoSite:Q05793 PaxDb:Q05793 PRIDE:Q05793
GeneID:15530 KEGG:mmu:15530 EvolutionaryTrace:Q05793 NextBio:288458
CleanEx:MM_HSPG2 Genevestigator:Q05793
GermOnline:ENSMUSG00000028763 Uniprot:Q05793
Length = 3707
Score = 161 (61.7 bits), Expect = 6.4e-08, P = 6.4e-08
Identities = 40/107 (37%), Positives = 47/107 (43%)
Query: 202 CKCNGHASRCIKSPQGELVCECRHNTAGKDCEKCKPFFSDRPWGRATVYDANECKGGRCK 261
C CNGHAS C P C+HNT G C+KCKP F +G AT A C+ C
Sbjct: 764 CNCNGHASSC--DPVYGHCLNCQHNTEGPQCDKCKPGF----FGDATKATATACRP--CP 815
Query: 262 CNG-HASR-----CIKSPQGALVCE-CRHNTAGKDCEKCKPFFSDRP 301
C ASR C G C+ C G+ CE C P + P
Sbjct: 816 CPYIDASRRFSDTCFLDTDGQATCDACAPGYTGRRCESCAPGYEGNP 862
Score = 156 (60.0 bits), Expect = 2.3e-07, P = 2.3e-07
Identities = 36/87 (41%), Positives = 40/87 (45%)
Query: 221 CECRHNTAGKDCEKCKPFFSDRPWGRATVYDANECKGGRCKCNGHASRCIKSPQGALVCE 280
C C +G CE C F+ P G Y C G C CNGHAS C P
Sbjct: 731 CRCPIGYSGLSCESCDAHFTRVPGGP---Y-LGTCSG--CNCNGHASSC--DPVYGHCLN 782
Query: 281 CRHNTAGKDCEKCKP-FFSDRPWGRAT 306
C+HNT G C+KCKP FF D AT
Sbjct: 783 CQHNTEGPQCDKCKPGFFGDATKATAT 809
Score = 153 (58.9 bits), Expect = 5.0e-07, P = 5.0e-07
Identities = 32/104 (30%), Positives = 47/104 (45%)
Query: 201 RCKCNGHASRCIKSPQGELVCECRHNTAGKDCEKCKP-FFSDRPWGRATVYDANECKGGR 259
RC C+GH+ C P+ C+H+T G CE+C+P ++ D R T D C
Sbjct: 1158 RCNCHGHSETC--EPETGACQSCQHHTEGASCEQCQPGYYGDAQ--RGTPQDCQPCPCYG 1213
Query: 260 CKCNGHASR-CIKSPQGALVCE-CRHNTAGKDCEKCKPFFSDRP 301
G A+ C G C+ C +G+ CE+C P + P
Sbjct: 1214 APAAGQAAHTCFLDTDGHPTCDSCSPGHSGRHCERCAPGYYGNP 1257
Score = 132 (51.5 bits), Expect = 0.00011, P = 0.00011
Identities = 32/105 (30%), Positives = 45/105 (42%)
Query: 202 CKCNGHASRCIKSPQGELVCECRHNTAGKDCEKCKPFFSDRPWGRATVYDANECKGGRCK 261
C+CNGH+ C P+ C+HNTAG+ CE C + +G AT +C+ C
Sbjct: 1563 CECNGHSDLC--HPETGACSRCQHNTAGEFCELCATGY----YGDATAGTPEDCQPCACP 1616
Query: 262 C----NGHASRCIKSPQGALVCE-CRHNTAGKDCEKCKPFFSDRP 301
N + C G C C G+ CE+C P + P
Sbjct: 1617 LTNPENMFSRTCESLGAGGYRCTACEPGYTGQYCEQCAPGYEGDP 1661
Score = 130 (50.8 bits), Expect = 0.00018, P = 0.00018
Identities = 29/94 (30%), Positives = 43/94 (45%)
Query: 221 CECRHNTAGKDCEKCKPFFSDRPWGRATVYDANECKGGRCKCNGHASRCIKSPQGALVCE 280
C C G C+ C ++ P G +Y C+ RC C+GH+ C P+
Sbjct: 1126 CTCPPGYRGPSCQDCDTGYTRVPSG---LY-LGTCE--RCNCHGHSETC--EPETGACQS 1177
Query: 281 CRHNTAGKDCEKCKP-FFSDRPWGRATVYDANEC 313
C+H+T G CE+C+P ++ D R T D C
Sbjct: 1178 CQHHTEGASCEQCQPGYYGDAQ--RGTPQDCQPC 1209
Score = 127 (49.8 bits), Expect = 0.00038, P = 0.00038
Identities = 30/94 (31%), Positives = 43/94 (45%)
Query: 221 CECRHNTAGKDCEKCKPFFSDRPWGRATVYDANECKGGRCKCNGHASRCIKSPQGALVCE 280
C C G C+ C P ++ G +Y +C+ C+CNGH+ C P+
Sbjct: 1530 CRCPPGYVGLSCQDCAPGYTRTGSG---LY-LGQCE--LCECNGHSDLC--HPETGACSR 1581
Query: 281 CRHNTAGKDCEKCKP-FFSDRPWGRATVYDANEC 313
C+HNTAG+ CE C ++ D G T D C
Sbjct: 1582 CQHNTAGEFCELCATGYYGDATAG--TPEDCQPC 1613
>UNIPROTKB|I3LV27 [details] [associations]
symbol:LAMA3 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0045995 "regulation of embryonic development"
evidence=IEA] [GO:0030334 "regulation of cell migration"
evidence=IEA] [GO:0030155 "regulation of cell adhesion"
evidence=IEA] [GO:0007155 "cell adhesion" evidence=IEA] [GO:0005606
"laminin-1 complex" evidence=IEA] [GO:0005102 "receptor binding"
evidence=IEA] InterPro:IPR009254 InterPro:IPR010307 Pfam:PF06008
Pfam:PF06009 GO:GO:0030155 GO:GO:0007155 Gene3D:2.60.120.200
InterPro:IPR008985 InterPro:IPR013320 SUPFAM:SSF49899 GO:GO:0030334
InterPro:IPR002049 InterPro:IPR001791 Pfam:PF00053 Pfam:PF00054
SMART:SM00180 SMART:SM00282 PROSITE:PS01248 PROSITE:PS50027
PROSITE:PS50025 Pfam:PF02210 GO:GO:0045995
GeneTree:ENSGT00700000104140 GO:GO:0005606 EMBL:CU993814
Ensembl:ENSSSCT00000024191 Uniprot:I3LV27
Length = 1668
Score = 155 (59.6 bits), Expect = 1.2e-07, P = 1.2e-07
Identities = 36/102 (35%), Positives = 55/102 (53%)
Query: 202 CKCNGHASRCIKSPQGELVC-ECRHNTAGKDCEKCKPFFSDRPWGRATVYDANECKGGRC 260
C C+GH++RC K G +C C+HNTAG+ CE+CK + +G A ++ + C+ C
Sbjct: 78 CNCHGHSNRC-KDGSG--ICINCQHNTAGEHCERCKEGY----YGNA-IHGS--CQACLC 127
Query: 261 K-CNGHASRCIKSPQGALVCECRHNTAGKDCEKCKPFFSDRP 301
N A+ CI + G + C C+ G CE+C P + P
Sbjct: 128 PHSNSFATGCIVTG-GNMRCLCKPGYTGTLCERCAPGYFGNP 168
>UNIPROTKB|F1SBB3 [details] [associations]
symbol:LAMA3 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0045995 "regulation of embryonic development"
evidence=IEA] [GO:0030334 "regulation of cell migration"
evidence=IEA] [GO:0030155 "regulation of cell adhesion"
evidence=IEA] [GO:0007155 "cell adhesion" evidence=IEA] [GO:0005606
"laminin-1 complex" evidence=IEA] [GO:0005102 "receptor binding"
evidence=IEA] InterPro:IPR009254 InterPro:IPR010307 Pfam:PF06008
Pfam:PF06009 GO:GO:0030155 GO:GO:0007155 Gene3D:2.60.120.200
InterPro:IPR008985 InterPro:IPR013320 SUPFAM:SSF49899 GO:GO:0030334
InterPro:IPR002049 InterPro:IPR001791 Pfam:PF00053 SMART:SM00180
SMART:SM00282 PROSITE:PS01248 PROSITE:PS50027 PROSITE:PS50025
Pfam:PF02210 GO:GO:0045995 GeneTree:ENSGT00700000104140
GO:GO:0005606 EMBL:CU993814 Ensembl:ENSSSCT00000004108 OMA:RAANQSS
Uniprot:F1SBB3
Length = 1724
Score = 155 (59.6 bits), Expect = 1.3e-07, P = 1.3e-07
Identities = 36/102 (35%), Positives = 55/102 (53%)
Query: 202 CKCNGHASRCIKSPQGELVC-ECRHNTAGKDCEKCKPFFSDRPWGRATVYDANECKGGRC 260
C C+GH++RC K G +C C+HNTAG+ CE+CK + +G A ++ + C+ C
Sbjct: 78 CNCHGHSNRC-KDGSG--ICINCQHNTAGEHCERCKEGY----YGNA-IHGS--CQACLC 127
Query: 261 K-CNGHASRCIKSPQGALVCECRHNTAGKDCEKCKPFFSDRP 301
N A+ CI + G + C C+ G CE+C P + P
Sbjct: 128 PHSNSFATGCIVTG-GNMRCLCKPGYTGTLCERCAPGYFGNP 168
>UNIPROTKB|F1MER7 [details] [associations]
symbol:HSPG2 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0060351 "cartilage development involved in endochondral
bone morphogenesis" evidence=IEA] [GO:0048738 "cardiac muscle
tissue development" evidence=IEA] [GO:0048704 "embryonic skeletal
system morphogenesis" evidence=IEA] [GO:0030198 "extracellular
matrix organization" evidence=IEA] [GO:0008104 "protein
localization" evidence=IEA] [GO:0008022 "protein C-terminus
binding" evidence=IEA] [GO:0007420 "brain development"
evidence=IEA] [GO:0005615 "extracellular space" evidence=IEA]
[GO:0005605 "basal lamina" evidence=IEA] [GO:0002062 "chondrocyte
differentiation" evidence=IEA] [GO:0001958 "endochondral
ossification" evidence=IEA] InterPro:IPR000742 InterPro:IPR002172
InterPro:IPR007110 Pfam:PF00008 Pfam:PF00057 PROSITE:PS50026
PROSITE:PS50068 PROSITE:PS50835 SMART:SM00181 SMART:SM00192
GO:GO:0005615 GO:GO:0008104 GO:GO:0007420 Gene3D:2.60.40.10
InterPro:IPR013783 InterPro:IPR003598 SMART:SM00408 GO:GO:0030198
InterPro:IPR013032 PROSITE:PS00022 GO:GO:0048738
Gene3D:2.60.120.200 InterPro:IPR008985 InterPro:IPR013320
SUPFAM:SSF49899 GO:GO:0005605 PROSITE:PS01186 Gene3D:4.10.400.10
InterPro:IPR023415 SUPFAM:SSF57424 PROSITE:PS01209
InterPro:IPR002049 InterPro:IPR001791 InterPro:IPR000082
Pfam:PF00053 Pfam:PF00054 SMART:SM00180 SMART:SM00282 SMART:SM00200
PROSITE:PS01248 PROSITE:PS50027 PROSITE:PS50025 PROSITE:PS50024
GeneTree:ENSGT00530000063501 InterPro:IPR013098 Pfam:PF07679
GO:GO:0048704 GO:GO:0002062 GO:GO:0001958 Pfam:PF02210
GO:GO:0060351 Pfam:PF12661 InterPro:IPR018031 InterPro:IPR000034
Pfam:PF00052 SMART:SM00281 PROSITE:PS51115 OMA:GVTQQCA
EMBL:DAAA02006470 EMBL:DAAA02006471 IPI:IPI01000857 IntAct:F1MER7
Ensembl:ENSBTAT00000022744 Uniprot:F1MER7
Length = 4374
Score = 157 (60.3 bits), Expect = 2.1e-07, P = 2.1e-07
Identities = 33/104 (31%), Positives = 48/104 (46%)
Query: 201 RCKCNGHASRCIKSPQGELVCECRHNTAGKDCEKCKP-FFSDRPWGRATVYDANECKGGR 259
RC C+GH C P+ EC+H+T G CE+C+P ++ D R T +D C
Sbjct: 1137 RCSCHGHTEVC--EPETGACQECQHHTEGPRCEQCQPGYYGDAQ--RGTPHDCQPCPCHG 1192
Query: 260 CKCNGHASR-CIKSPQGALVCE-CRHNTAGKDCEKCKPFFSDRP 301
G A+ C G C+ C +G+ CE+C P + P
Sbjct: 1193 APAAGQATHTCFLDTDGHPTCDACSPGHSGRHCERCAPGYYGNP 1236
Score = 146 (56.5 bits), Expect = 3.6e-06, P = 3.6e-06
Identities = 35/87 (40%), Positives = 38/87 (43%)
Query: 221 CECRHNTAGKDCEKCKPFFSDRPWGRATVYDANECKGGRCKCNGHASRCIKSPQGALVCE 280
C C +G CE C F+ P G Y C G C CNGHAS C P
Sbjct: 710 CRCPIGYSGLSCESCDAHFTRVPGGP---Y-LGTCSG--CNCNGHASSC--DPVYGHCLN 761
Query: 281 CRHNTAGKDCEKCKP-FFSDRPWGRAT 306
C+HNT G C KCK FF D AT
Sbjct: 762 CQHNTEGPQCNKCKAGFFGDATKATAT 788
Score = 143 (55.4 bits), Expect = 7.8e-06, P = 7.8e-06
Identities = 38/107 (35%), Positives = 44/107 (41%)
Query: 202 CKCNGHASRCIKSPQGELVCECRHNTAGKDCEKCKPFFSDRPWGRATVYDANECKGGRCK 261
C CNGHAS C P C+HNT G C KCK F +G AT A C+ C
Sbjct: 743 CNCNGHASSC--DPVYGHCLNCQHNTEGPQCNKCKAGF----FGDATKATATACRP--CP 794
Query: 262 CNG-HASR-----CIKSPQGALVCE-CRHNTAGKDCEKCKPFFSDRP 301
C ASR C G C+ C G+ CE C + P
Sbjct: 795 CPYIDASRRFSDTCFLDTDGQATCDACAPGYTGRRCESCAAGYEGNP 841
Score = 135 (52.6 bits), Expect = 6.0e-05, P = 6.0e-05
Identities = 30/94 (31%), Positives = 44/94 (46%)
Query: 221 CECRHNTAGKDCEKCKPFFSDRPWGRATVYDANECKGGRCKCNGHASRCIKSPQGALVCE 280
C C G C+ C ++ P G +Y C+ RC C+GH C P+ E
Sbjct: 1105 CACPPGYRGPSCQDCDAGYTRMPSG---LY-LGTCE--RCSCHGHTEVC--EPETGACQE 1156
Query: 281 CRHNTAGKDCEKCKP-FFSDRPWGRATVYDANEC 313
C+H+T G CE+C+P ++ D R T +D C
Sbjct: 1157 CQHHTEGPRCEQCQPGYYGDAQ--RGTPHDCQPC 1188
Score = 135 (52.6 bits), Expect = 6.0e-05, P = 6.0e-05
Identities = 31/105 (29%), Positives = 47/105 (44%)
Query: 202 CKCNGHASRCIKSPQGELVCECRHNTAGKDCEKCKPFFSDRPWGRATVYDANECKGGRCK 261
C+CNGH+ C P+ +C+H+ AG+ CE+C P + +G AT +C+ C
Sbjct: 1543 CECNGHSDLC--HPETGACSQCQHHAAGEFCEQCAPGY----YGDATAGTPEDCQPCACP 1596
Query: 262 C----NGHASRCIKSPQGALVCE-CRHNTAGKDCEKCKPFFSDRP 301
N + C G C C G+ CE+C P + P
Sbjct: 1597 LTNPENMFSRTCESLGAGGYRCTACEPGYTGQYCEQCAPGYVGNP 1641
Score = 130 (50.8 bits), Expect = 0.00021, P = 0.00021
Identities = 29/94 (30%), Positives = 44/94 (46%)
Query: 221 CECRHNTAGKDCEKCKPFFSDRPWGRATVYDANECKGGRCKCNGHASRCIKSPQGALVCE 280
C C G C+ C P ++ G +Y C+ C+CNGH+ C P+ +
Sbjct: 1510 CRCPPGYVGSSCQDCAPGYTRTGSG---LY-LGHCE--LCECNGHSDLC--HPETGACSQ 1561
Query: 281 CRHNTAGKDCEKCKP-FFSDRPWGRATVYDANEC 313
C+H+ AG+ CE+C P ++ D G T D C
Sbjct: 1562 CQHHAAGEFCEQCAPGYYGDATAG--TPEDCQPC 1593
>UNIPROTKB|E5RFQ2 [details] [associations]
symbol:LAMA4 "Laminin subunit alpha-4" species:9606 "Homo
sapiens" [GO:0001568 "blood vessel development" evidence=IEA]
[GO:0005605 "basal lamina" evidence=IEA] [GO:0050873 "brown fat
cell differentiation" evidence=IEA] GO:GO:0050873 GO:GO:0005605
InterPro:IPR002049 Pfam:PF00053 SMART:SM00180 PROSITE:PS01248
PROSITE:PS50027 GO:GO:0001568 EMBL:Z99289 EMBL:AL590106
HGNC:HGNC:6484 ChiTaRS:LAMA4 IPI:IPI00983822
ProteinModelPortal:E5RFQ2 SMR:E5RFQ2 Ensembl:ENST00000521398
ArrayExpress:E5RFQ2 Bgee:E5RFQ2 Uniprot:E5RFQ2
Length = 331
Score = 136 (52.9 bits), Expect = 1.6e-06, P = 1.6e-06
Identities = 33/101 (32%), Positives = 46/101 (45%)
Query: 202 CKCNGHASRCIKSPQGELVCECRHNTAGKDCEKCKP-FFSDRPWGRATVYDANECKGGRC 260
C CNG+++ C+ G V C+ NT G+ CEKC + D G A + C
Sbjct: 82 CDCNGNSNECLDG-SGYCV-HCQRNTTGEHCEKCLDGYIGDSIRG-APQF-CQPCPCPLP 137
Query: 261 KCNGHASRCIKSPQGALVCECRHNTAGKDCEKCKPFFSDRP 301
A C + GA+ C C N AG +CE+C P + P
Sbjct: 138 HLANFAESCYRK-NGAVRCICNENYAGPNCERCAPGYYGNP 177
Score = 116 (45.9 bits), Expect = 0.00030, P = 0.00030
Identities = 29/97 (29%), Positives = 46/97 (47%)
Query: 208 ASRCIKSPQGELVCECRHNTAGKDCEKCKPFFSDRPWGRATVYDANECKGGRCKCNGHAS 267
A C + G + C C N AG +CE+C P + P + + CK +C C+G++
Sbjct: 143 AESCYRK-NGAVRCICNENYAGPNCERCAPGYYGNP-----LLIGSTCK--KCDCSGNSD 194
Query: 268 -RCIKSPQGALVCECRH---NTAGKDCEKCKP-FFSD 299
I + +CR+ NT G CE+C P ++ D
Sbjct: 195 PNLIFEDCDEVTGQCRNCLRNTTGFKCERCAPGYYGD 231
>RGD|69063 [details] [associations]
symbol:Atrn "attractin" species:10116 "Rattus norvegicus"
[GO:0003674 "molecular_function" evidence=ND] [GO:0004872 "receptor
activity" evidence=IEA;ISO] [GO:0005615 "extracellular space"
evidence=ISO;ISS] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0005886
"plasma membrane" evidence=IDA] [GO:0006954 "inflammatory response"
evidence=IEA] [GO:0006979 "response to oxidative stress"
evidence=IMP] [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0021549 "cerebellum development" evidence=ISO] [GO:0030246
"carbohydrate binding" evidence=IEA] [GO:0040014 "regulation of
multicellular organism growth" evidence=IEA;ISO] [GO:0042552
"myelination" evidence=ISO] [GO:0043473 "pigmentation" evidence=ISO]
InterPro:IPR000742 InterPro:IPR001304 InterPro:IPR002165
InterPro:IPR006652 InterPro:IPR015915 Pfam:PF01344 Pfam:PF01437
PROSITE:PS50026 PROSITE:PS50041 SMART:SM00034 SMART:SM00181
RGD:69063 GO:GO:0016021 GO:GO:0005886 GO:GO:0005737 GO:GO:0005615
GO:GO:0006979 GO:GO:0030246 GO:GO:0006954 Gene3D:3.10.100.10
InterPro:IPR016186 InterPro:IPR016187 SUPFAM:SSF56436
PROSITE:PS00615 GO:GO:0040014 GO:GO:0004872 InterPro:IPR013032
PROSITE:PS00022 Gene3D:2.120.10.80 PROSITE:PS01186
InterPro:IPR002049 SMART:SM00180 PROSITE:PS01248 PROSITE:PS50027
Gene3D:2.60.120.290 InterPro:IPR000859 Pfam:PF00431 SMART:SM00042
SUPFAM:SSF49854 PROSITE:PS01180 eggNOG:NOG242225 HOVERGEN:HBG004312
InterPro:IPR003659 SMART:SM00423 GeneTree:ENSGT00390000001118
HOGENOM:HOG000231727 CTD:8455 OrthoDB:EOG4R23SZ EMBL:AB038387
EMBL:AB038388 EMBL:AB049248 IPI:IPI00194733 IPI:IPI00553894
RefSeq:NP_112641.1 UniGene:Rn.53846 ProteinModelPortal:Q99J86
STRING:Q99J86 PhosphoSite:Q99J86 PRIDE:Q99J86
Ensembl:ENSRNOT00000028847 GeneID:83526 KEGG:rno:83526
UCSC:RGD:69063 InParanoid:Q99J86 NextBio:616013
Genevestigator:Q99J86 Uniprot:Q99J86
Length = 1432
Score = 143 (55.4 bits), Expect = 1.6e-06, Sum P(2) = 1.6e-06
Identities = 35/94 (37%), Positives = 49/94 (52%)
Query: 202 CKCNGHASRCIKSPQGELVCE-CRHNTAGKDCEKCKPFFSDRPWGRATVYDANECKGGRC 260
C+CNGH S+CI + +CE C T GK CE C F +G T + +C+ C
Sbjct: 1066 CQCNGH-SKCIN----QSICEKCEDLTTGKHCETCISGF----YGDPT--NGGKCQP--C 1112
Query: 261 KCNGHASRCIKSPQGALVCECRHNTAGKDCEKCK 294
KCNGHAS C + G C + G++C+ C+
Sbjct: 1113 KCNGHASLC-NTNTGKCFCTTK-GVKGEECQLCE 1144
Score = 47 (21.6 bits), Expect = 1.6e-06, Sum P(2) = 1.6e-06
Identities = 10/39 (25%), Positives = 17/39 (43%)
Query: 37 CIPDFVNAAFGQ-EVKVNSVCGLESPERYCDTSGACHVC 74
C+P + GQ + C ++P YC+ +C C
Sbjct: 730 CVPVNHSCTEGQISIAKYDNCPKDNPMYYCNKKTSCRSC 768
>UNIPROTKB|F1Q117 [details] [associations]
symbol:ATRN "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0030246 "carbohydrate binding" evidence=IEA] InterPro:IPR000742
InterPro:IPR001304 InterPro:IPR002165 InterPro:IPR006652
InterPro:IPR015915 Pfam:PF01344 Pfam:PF01437 PROSITE:PS50026
PROSITE:PS50041 SMART:SM00034 SMART:SM00181 GO:GO:0016021
GO:GO:0030246 Gene3D:3.10.100.10 InterPro:IPR016186
InterPro:IPR016187 SUPFAM:SSF56436 InterPro:IPR013032
PROSITE:PS00022 Gene3D:2.120.10.80 InterPro:IPR002049 SMART:SM00180
PROSITE:PS01248 PROSITE:PS50027 Gene3D:2.60.120.290
InterPro:IPR000859 Pfam:PF00431 SMART:SM00042 SUPFAM:SSF49854
PROSITE:PS01180 InterPro:IPR003659 SMART:SM00423
GeneTree:ENSGT00390000001118 CTD:8455 OMA:NPLKGTC EMBL:AAEX03013830
EMBL:AAEX03013831 RefSeq:XP_534360.2 Ensembl:ENSCAFT00000010258
GeneID:477170 KEGG:cfa:477170 Uniprot:F1Q117
Length = 1417
Score = 142 (55.0 bits), Expect = 2.0e-06, Sum P(2) = 2.0e-06
Identities = 35/94 (37%), Positives = 48/94 (51%)
Query: 202 CKCNGHASRCIKSPQGELVCE-CRHNTAGKDCEKCKPFFSDRPWGRATVYDANECKGGRC 260
C+CNGH S+CI + +CE C + T GK CE C F +G T + C+ C
Sbjct: 1051 CQCNGH-SKCIN----QSICEKCENLTTGKHCETCISGF----YGDPT--NGGRCQP--C 1097
Query: 261 KCNGHASRCIKSPQGALVCECRHNTAGKDCEKCK 294
KCNGHAS C + G C + G +C+ C+
Sbjct: 1098 KCNGHASLC-NTNTGKCFCTTK-GVKGDECQLCE 1129
Score = 47 (21.6 bits), Expect = 2.0e-06, Sum P(2) = 2.0e-06
Identities = 10/39 (25%), Positives = 17/39 (43%)
Query: 37 CIPDFVNAAFGQ-EVKVNSVCGLESPERYCDTSGACHVC 74
C+P + GQ + C ++P YC+ +C C
Sbjct: 715 CVPVNHSCTEGQISISRYENCPKDNPMYYCNKKTSCRSC 753
>UNIPROTKB|O75882 [details] [associations]
symbol:ATRN "Attractin" species:9606 "Homo sapiens"
[GO:0030246 "carbohydrate binding" evidence=IEA] [GO:0006954
"inflammatory response" evidence=IEA] [GO:0004872 "receptor
activity" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0006979 "response to oxidative stress" evidence=IEA]
[GO:0040014 "regulation of multicellular organism growth"
evidence=IEA] [GO:0005615 "extracellular space" evidence=IDA]
[GO:0005886 "plasma membrane" evidence=NAS] [GO:0005887 "integral
to plasma membrane" evidence=TAS] InterPro:IPR000742
InterPro:IPR001304 InterPro:IPR002165 InterPro:IPR006652
InterPro:IPR015915 Pfam:PF01344 Pfam:PF01437 PROSITE:PS50026
PROSITE:PS50041 SMART:SM00034 SMART:SM00181 GO:GO:0005737
GO:GO:0005615 GO:GO:0005887 GO:GO:0006979 GO:GO:0030246
GO:GO:0006954 Gene3D:3.10.100.10 InterPro:IPR016186
InterPro:IPR016187 SUPFAM:SSF56436 PROSITE:PS00615 GO:GO:0040014
GO:GO:0004872 InterPro:IPR013032 PROSITE:PS00022 Gene3D:2.120.10.80
PROSITE:PS01186 InterPro:IPR002049 SMART:SM00180 PROSITE:PS01248
PROSITE:PS50027 Gene3D:2.60.120.290 InterPro:IPR000859 Pfam:PF00431
SMART:SM00042 SUPFAM:SSF49854 PROSITE:PS01180 eggNOG:NOG242225
HOVERGEN:HBG004312 InterPro:IPR003659 SMART:SM00423 EMBL:AF218915
EMBL:AF218889 EMBL:AF218890 EMBL:AF218891 EMBL:AF218892
EMBL:AF218893 EMBL:AF218894 EMBL:AF218895 EMBL:AF218896
EMBL:AF218897 EMBL:AF218898 EMBL:AF218899 EMBL:AF218900
EMBL:AF218901 EMBL:AF218902 EMBL:AF218903 EMBL:AF218904
EMBL:AF218905 EMBL:AF218906 EMBL:AF218907 EMBL:AF218908
EMBL:AF218909 EMBL:AF218911 EMBL:AF218912 EMBL:AF218913
EMBL:AF218914 EMBL:AF218910 EMBL:AF106861 EMBL:AK293010
EMBL:AL109805 EMBL:AL132773 EMBL:AL353193 EMBL:BC101705
EMBL:AB011120 IPI:IPI00027235 IPI:IPI00162735 IPI:IPI00939169
RefSeq:NP_001193976.1 RefSeq:NP_647537.1 RefSeq:NP_647538.1
UniGene:Hs.276252 ProteinModelPortal:O75882 SMR:O75882
IntAct:O75882 STRING:O75882 PhosphoSite:O75882 PaxDb:O75882
PRIDE:O75882 Ensembl:ENST00000262919 Ensembl:ENST00000446916
GeneID:8455 KEGG:hsa:8455 UCSC:uc002wil.2 UCSC:uc002wim.2
UCSC:uc021vzz.1 CTD:8455 GeneCards:GC20P003451 HGNC:HGNC:885
HPA:HPA008853 MIM:603130 neXtProt:NX_O75882 PharmGKB:PA25178
InParanoid:O75882 OMA:NPLKGTC OrthoDB:EOG4R23SZ PhylomeDB:O75882
ChiTaRS:ATRN GenomeRNAi:8455 NextBio:31642 ArrayExpress:O75882
Bgee:O75882 Genevestigator:O75882 GermOnline:ENSG00000088812
Uniprot:O75882
Length = 1429
Score = 143 (55.4 bits), Expect = 2.1e-06, Sum P(2) = 2.1e-06
Identities = 35/94 (37%), Positives = 49/94 (52%)
Query: 202 CKCNGHASRCIKSPQGELVCE-CRHNTAGKDCEKCKPFFSDRPWGRATVYDANECKGGRC 260
C+CNGH S+CI + +CE C + T GK CE C F +G T + +C+ C
Sbjct: 1063 CQCNGH-SKCIN----QSICEKCENLTTGKHCETCISGF----YGDPT--NGGKCQP--C 1109
Query: 261 KCNGHASRCIKSPQGALVCECRHNTAGKDCEKCK 294
KCNGHAS C + G C + G +C+ C+
Sbjct: 1110 KCNGHASLC-NTNTGKCFCTTK-GVKGDECQLCE 1141
Score = 46 (21.3 bits), Expect = 2.1e-06, Sum P(2) = 2.1e-06
Identities = 10/39 (25%), Positives = 18/39 (46%)
Query: 37 CIPDFVNAAFGQ-EVKVNSVCGLESPERYCDTSGACHVC 74
C+P + + GQ + C ++P YC+ +C C
Sbjct: 727 CVPRNHSCSEGQISIFRYENCPKDNPMYYCNKKTSCRSC 765
>MGI|MGI:1341628 [details] [associations]
symbol:Atrn "attractin" species:10090 "Mus musculus"
[GO:0004872 "receptor activity" evidence=IPI] [GO:0005515 "protein
binding" evidence=IPI] [GO:0005615 "extracellular space"
evidence=ISO] [GO:0005737 "cytoplasm" evidence=ISO] [GO:0005886
"plasma membrane" evidence=ISO] [GO:0006954 "inflammatory response"
evidence=IEA] [GO:0006979 "response to oxidative stress"
evidence=ISO] [GO:0016020 "membrane" evidence=IEA] [GO:0016021
"integral to membrane" evidence=IEA] [GO:0021549 "cerebellum
development" evidence=IMP] [GO:0030246 "carbohydrate binding"
evidence=IEA] [GO:0040014 "regulation of multicellular organism
growth" evidence=IMP] [GO:0042552 "myelination" evidence=IMP]
[GO:0043473 "pigmentation" evidence=IMP] InterPro:IPR000742
InterPro:IPR001304 InterPro:IPR002165 InterPro:IPR006652
InterPro:IPR015915 Pfam:PF01344 Pfam:PF01437 PROSITE:PS50026
PROSITE:PS50041 SMART:SM00034 SMART:SM00181 MGI:MGI:1341628
GO:GO:0016021 GO:GO:0005886 GO:GO:0005737 GO:GO:0005615
GO:GO:0006979 GO:GO:0030246 GO:GO:0006954 Gene3D:3.10.100.10
InterPro:IPR016186 InterPro:IPR016187 SUPFAM:SSF56436 GO:GO:0040014
GO:GO:0004872 EMBL:CH466519 InterPro:IPR013032 PROSITE:PS00022
GO:GO:0042552 Gene3D:2.120.10.80 GO:GO:0021549 PROSITE:PS01186
EMBL:AL833771 InterPro:IPR002049 SMART:SM00180 PROSITE:PS01248
PROSITE:PS50027 Gene3D:2.60.120.290 InterPro:IPR000859 Pfam:PF00431
SMART:SM00042 SUPFAM:SSF49854 PROSITE:PS01180 GO:GO:0043473
eggNOG:NOG242225 HOVERGEN:HBG004312 InterPro:IPR003659
SMART:SM00423 GeneTree:ENSGT00390000001118 HOGENOM:HOG000231727
CTD:8455 OMA:NPLKGTC OrthoDB:EOG4R23SZ EMBL:AF116897 EMBL:AF119821
EMBL:AH007542 IPI:IPI00224752 RefSeq:NP_033860.2 UniGene:Mm.119936
ProteinModelPortal:Q9WU60 SMR:Q9WU60 STRING:Q9WU60
PhosphoSite:Q9WU60 PaxDb:Q9WU60 PRIDE:Q9WU60
Ensembl:ENSMUST00000028781 GeneID:11990 KEGG:mmu:11990
InParanoid:A2AP43 NextBio:280155 Bgee:Q9WU60 CleanEx:MM_ATRN
Genevestigator:Q9WU60 GermOnline:ENSMUSG00000027312 Uniprot:Q9WU60
Length = 1428
Score = 141 (54.7 bits), Expect = 2.1e-06, Sum P(2) = 2.1e-06
Identities = 35/94 (37%), Positives = 48/94 (51%)
Query: 202 CKCNGHASRCIKSPQGELVCE-CRHNTAGKDCEKCKPFFSDRPWGRATVYDANECKGGRC 260
C+CNGH S+CI + +CE C T GK CE C F +G T + +C+ C
Sbjct: 1062 CQCNGH-SKCIN----QSICEKCEDLTTGKHCETCISGF----YGDPT--NGGKCQP--C 1108
Query: 261 KCNGHASRCIKSPQGALVCECRHNTAGKDCEKCK 294
KCNGHAS C + G C + G +C+ C+
Sbjct: 1109 KCNGHASLC-NTNTGKCFCTTK-GVKGDECQLCE 1140
Score = 48 (22.0 bits), Expect = 2.1e-06, Sum P(2) = 2.1e-06
Identities = 10/39 (25%), Positives = 17/39 (43%)
Query: 37 CIPDFVNAAFGQ-EVKVNSVCGLESPERYCDTSGACHVC 74
C+P + GQ + C ++P YC+ +C C
Sbjct: 726 CVPVNHSCTEGQISIAKYESCPKDNPMYYCNKKTSCRSC 764
>UNIPROTKB|P98160 [details] [associations]
symbol:HSPG2 "Basement membrane-specific heparan sulfate
proteoglycan core protein" species:9606 "Homo sapiens" [GO:0001525
"angiogenesis" evidence=IEA] [GO:0046872 "metal ion binding"
evidence=IEA] [GO:0001958 "endochondral ossification" evidence=IEA]
[GO:0002062 "chondrocyte differentiation" evidence=IEA] [GO:0005605
"basal lamina" evidence=IEA] [GO:0007420 "brain development"
evidence=IEA] [GO:0008104 "protein localization" evidence=IEA]
[GO:0030198 "extracellular matrix organization" evidence=IEA]
[GO:0048704 "embryonic skeletal system morphogenesis" evidence=IEA]
[GO:0048738 "cardiac muscle tissue development" evidence=IEA]
[GO:0060351 "cartilage development involved in endochondral bone
morphogenesis" evidence=IEA] [GO:0008022 "protein C-terminus
binding" evidence=IPI] [GO:0005515 "protein binding" evidence=IPI]
[GO:0070062 "extracellular vesicular exosome" evidence=IDA]
[GO:0005576 "extracellular region" evidence=TAS] [GO:0005796 "Golgi
lumen" evidence=TAS] [GO:0005886 "plasma membrane" evidence=TAS]
[GO:0005975 "carbohydrate metabolic process" evidence=TAS]
[GO:0006024 "glycosaminoglycan biosynthetic process" evidence=TAS]
[GO:0006027 "glycosaminoglycan catabolic process" evidence=TAS]
[GO:0006629 "lipid metabolic process" evidence=TAS] [GO:0030203
"glycosaminoglycan metabolic process" evidence=TAS] [GO:0030204
"chondroitin sulfate metabolic process" evidence=TAS] [GO:0042157
"lipoprotein metabolic process" evidence=TAS] [GO:0043202
"lysosomal lumen" evidence=TAS] [GO:0044281 "small molecule
metabolic process" evidence=TAS] [GO:0005615 "extracellular space"
evidence=IDA] [GO:0031012 "extracellular matrix" evidence=ISS;IDA]
Reactome:REACT_111217 InterPro:IPR000742 InterPro:IPR002172
InterPro:IPR007110 Pfam:PF00008 Pfam:PF00057 PROSITE:PS50026
PROSITE:PS50068 PROSITE:PS50835 SMART:SM00181 SMART:SM00192
GO:GO:0005886 Reactome:REACT_116125 GO:GO:0005615 GO:GO:0008104
GO:GO:0007420 Gene3D:2.60.40.10 InterPro:IPR013783 GO:GO:0046872
GO:GO:0005975 GO:GO:0070062 InterPro:IPR003598 SMART:SM00408
DrugBank:DB00102 GO:GO:0006629 GO:GO:0030198 GO:GO:0001525
GO:GO:0042157 InterPro:IPR013032 PROSITE:PS00022 GO:GO:0048738
Gene3D:2.60.120.200 InterPro:IPR008985 InterPro:IPR013320
SUPFAM:SSF49899 GO:GO:0005605 PROSITE:PS01186 Gene3D:4.10.400.10
InterPro:IPR023415 SUPFAM:SSF57424 PROSITE:PS01209 GO:GO:0043202
InterPro:IPR002049 InterPro:IPR001791 InterPro:IPR000082
Pfam:PF00053 Pfam:PF00054 SMART:SM00180 SMART:SM00282 SMART:SM00200
PROSITE:PS01248 PROSITE:PS50027 PROSITE:PS50025 PROSITE:PS50024
GO:GO:0005796 GO:GO:0030204 GO:GO:0006024 GO:GO:0006027
InterPro:IPR013098 Pfam:PF07679 GO:GO:0048704 GO:GO:0002062
GO:GO:0001958 Pfam:PF02210 GO:GO:0060351 Pfam:PF12661 EMBL:AL590556
DrugBank:DB00039 InterPro:IPR018031 InterPro:IPR000034 Pfam:PF00052
SMART:SM00281 PROSITE:PS51115 EMBL:AL590103 EMBL:M85289 EMBL:X62515
EMBL:L22078 EMBL:AL445795 EMBL:S76436 EMBL:M64283 IPI:IPI00024284
PIR:A38096 RefSeq:NP_005520.4 UniGene:Hs.562227 PDB:3SH4 PDB:3SH5
PDBsum:3SH4 PDBsum:3SH5 ProteinModelPortal:P98160 SMR:P98160
IntAct:P98160 MINT:MINT-123304 STRING:P98160 PhosphoSite:P98160
DMDM:218512120 DOSAC-COBS-2DPAGE:P98160 PaxDb:P98160 PRIDE:P98160
Ensembl:ENST00000374695 GeneID:3339 KEGG:hsa:3339 UCSC:uc001bfj.3
CTD:3339 GeneCards:GC01M022148 H-InvDB:HIX0023554
H-InvDB:HIX0023598 HGNC:HGNC:5273 HPA:CAB009820 HPA:CAB020718
HPA:HPA018892 MIM:142461 MIM:224410 MIM:255800 neXtProt:NX_P98160
Orphanet:1865 Orphanet:800 PharmGKB:PA29537 eggNOG:NOG258321
HOGENOM:HOG000049276 HOVERGEN:HBG008174 InParanoid:P98160 KO:K06255
OMA:GVTQQCA OrthoDB:EOG44QT00 ChiTaRS:HSPG2 GenomeRNAi:3339
NextBio:13216 ArrayExpress:P98160 Bgee:P98160 CleanEx:HS_HSPG2
Genevestigator:P98160 GermOnline:ENSG00000142798 Uniprot:P98160
Length = 4391
Score = 148 (57.2 bits), Expect = 2.2e-06, P = 2.2e-06
Identities = 35/103 (33%), Positives = 41/103 (39%)
Query: 202 CKCNGHASRCIKSPQGELVCECRHNTAGKDCEKCKP-FFSDRPWGRATVYDANECKGGRC 260
C CNGHAS C P C+HNT G C KCK FF D +AT C
Sbjct: 764 CNCNGHASSC--DPVYGHCLNCQHNTEGPQCNKCKAGFFGDAM--KATATSCRPCPCPYI 819
Query: 261 KCNGHAS-RCIKSPQGALVCE-CRHNTAGKDCEKCKPFFSDRP 301
+ S C G C+ C G+ CE C P + P
Sbjct: 820 DASRRFSDTCFLDTDGQATCDACAPGYTGRRCESCAPGYEGNP 862
Score = 146 (56.5 bits), Expect = 3.6e-06, P = 3.6e-06
Identities = 36/94 (38%), Positives = 40/94 (42%)
Query: 221 CECRHNTAGKDCEKCKPFFSDRPWGRATVYDANECKGGRCKCNGHASRCIKSPQGALVCE 280
C C +G CE C F+ P G Y C G C CNGHAS C P
Sbjct: 731 CRCPIGYSGLSCESCDAHFTRVPGGP---Y-LGTCSG--CNCNGHASSC--DPVYGHCLN 782
Query: 281 CRHNTAGKDCEKCKP-FFSDRPWGRATVYDANEC 313
C+HNT G C KCK FF D +AT C
Sbjct: 783 CQHNTEGPQCNKCKAGFFGDAM--KATATSCRPC 814
Score = 144 (55.7 bits), Expect = 6.0e-06, P = 6.0e-06
Identities = 32/104 (30%), Positives = 47/104 (45%)
Query: 201 RCKCNGHASRCIKSPQGELVCECRHNTAGKDCEKCKP-FFSDRPWGRATVYDANECKGGR 259
RC C+GH+ C P+ C+H+T G CE+C+P ++ D R T D C
Sbjct: 1158 RCSCHGHSEAC--EPETGACQGCQHHTEGPRCEQCQPGYYGDAQ--RGTPQDCQLCPCYG 1213
Query: 260 CKCNGHASR-CIKSPQGALVCE-CRHNTAGKDCEKCKPFFSDRP 301
G A+ C G C+ C +G+ CE+C P + P
Sbjct: 1214 DPAAGQAAHTCFLDTDGHPTCDACSPGHSGRHCERCAPGYYGNP 1257
Score = 136 (52.9 bits), Expect = 4.7e-05, P = 4.7e-05
Identities = 32/105 (30%), Positives = 46/105 (43%)
Query: 202 CKCNGHASRCIKSPQGELVCECRHNTAGKDCEKCKPFFSDRPWGRATVYDANECKGGRCK 261
C+CNGH+ C P+ +C+HN AG+ CE C P + +G AT +C+ C
Sbjct: 1563 CECNGHSDLC--HPETGACSQCQHNAAGEFCELCAPGY----YGDATAGTPEDCQPCACP 1616
Query: 262 C----NGHASRCIKSPQGALVCE-CRHNTAGKDCEKCKPFFSDRP 301
N + C G C C G+ CE+C P + P
Sbjct: 1617 LTNPENMFSRTCESLGAGGYRCTACEPGYTGQYCEQCGPGYVGNP 1661
Score = 129 (50.5 bits), Expect = 0.00028, P = 0.00028
Identities = 30/94 (31%), Positives = 43/94 (45%)
Query: 221 CECRHNTAGKDCEKCKPFFSDRPWGRATVYDANECKGGRCKCNGHASRCIKSPQGALVCE 280
C C G C+ C P ++ G +Y C+ C+CNGH+ C P+ +
Sbjct: 1530 CRCPPGYIGLSCQDCAPGYTRTGSG---LY-LGHCE--LCECNGHSDLC--HPETGACSQ 1581
Query: 281 CRHNTAGKDCEKCKP-FFSDRPWGRATVYDANEC 313
C+HN AG+ CE C P ++ D G T D C
Sbjct: 1582 CQHNAAGEFCELCAPGYYGDATAG--TPEDCQPC 1613
Score = 128 (50.1 bits), Expect = 0.00036, P = 0.00036
Identities = 32/96 (33%), Positives = 47/96 (48%)
Query: 221 CECRHNTAGKDCEKCKPFFSDRPWGRATVYDANECKGGRCKCNGHASRCIKSPQ-GALVC 279
C C G C+ C ++ P G +Y C+ RC C+GH+ C P+ GA C
Sbjct: 1126 CSCPPGYRGPSCQDCDTGYTRTPSG---LY-LGTCE--RCSCHGHSEAC--EPETGA--C 1175
Query: 280 E-CRHNTAGKDCEKCKP-FFSDRPWGRATVYDANEC 313
+ C+H+T G CE+C+P ++ D R T D C
Sbjct: 1176 QGCQHHTEGPRCEQCQPGYYGDAQ--RGTPQDCQLC 1209
>UNIPROTKB|K7GNE0 [details] [associations]
symbol:ATRN "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0030246 "carbohydrate binding" evidence=IEA] InterPro:IPR000742
InterPro:IPR001304 InterPro:IPR002165 InterPro:IPR006652
InterPro:IPR015915 Pfam:PF01344 Pfam:PF01437 PROSITE:PS50026
PROSITE:PS50041 SMART:SM00034 SMART:SM00181 Gene3D:3.10.100.10
InterPro:IPR016186 InterPro:IPR016187 SUPFAM:SSF56436
InterPro:IPR013032 PROSITE:PS00022 Gene3D:2.120.10.80
InterPro:IPR002049 SMART:SM00180 PROSITE:PS01248 PROSITE:PS50027
Gene3D:2.60.120.290 InterPro:IPR000859 SUPFAM:SSF49854
PROSITE:PS01180 InterPro:IPR003659 SMART:SM00423
GeneTree:ENSGT00390000001118 EMBL:CU302393 EMBL:CU468397
Ensembl:ENSSSCT00000035365 Uniprot:K7GNE0
Length = 1260
Score = 140 (54.3 bits), Expect = 2.7e-06, Sum P(2) = 2.7e-06
Identities = 34/94 (36%), Positives = 49/94 (52%)
Query: 202 CKCNGHASRCIKSPQGELVCE-CRHNTAGKDCEKCKPFFSDRPWGRATVYDANECKGGRC 260
C+CNGH S+C+ + VCE C + T G+ CE C F +G T + +C+ C
Sbjct: 894 CQCNGH-SKCVN----QSVCEKCENLTTGRHCETCISGF----YGDPT--NGGKCQP--C 940
Query: 261 KCNGHASRCIKSPQGALVCECRHNTAGKDCEKCK 294
KCNGHAS C + G C + G +C+ C+
Sbjct: 941 KCNGHASLC-NTNTGKCFCTTK-GVKGDECQLCE 972
Score = 47 (21.6 bits), Expect = 2.7e-06, Sum P(2) = 2.7e-06
Identities = 10/39 (25%), Positives = 17/39 (43%)
Query: 37 CIPDFVNAAFGQ-EVKVNSVCGLESPERYCDTSGACHVC 74
C+P + GQ + C ++P YC+ +C C
Sbjct: 558 CVPMNHSCTEGQISIAKYENCPKDNPMYYCNKKTSCRSC 596
>UNIPROTKB|F1NSZ5 [details] [associations]
symbol:LAMA4 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0005102 "receptor binding" evidence=IEA] [GO:0005606
"laminin-1 complex" evidence=IEA] [GO:0007155 "cell adhesion"
evidence=IEA] [GO:0030155 "regulation of cell adhesion"
evidence=IEA] [GO:0030334 "regulation of cell migration"
evidence=IEA] [GO:0045995 "regulation of embryonic development"
evidence=IEA] InterPro:IPR009254 InterPro:IPR010307 Pfam:PF06008
Pfam:PF06009 GO:GO:0030155 GO:GO:0050873 GO:GO:0007155
Gene3D:2.60.120.200 InterPro:IPR008985 InterPro:IPR013320
SUPFAM:SSF49899 GO:GO:0030334 InterPro:IPR002049 InterPro:IPR001791
Pfam:PF00053 SMART:SM00180 SMART:SM00282 PROSITE:PS01248
PROSITE:PS50027 PROSITE:PS50025 Pfam:PF02210 GO:GO:0045995
GeneTree:ENSGT00700000104140 GO:GO:0005606 OMA:QLDDYNA
EMBL:AADN02002050 EMBL:AADN02002048 EMBL:AADN02002049
IPI:IPI00578400 Ensembl:ENSGALT00000024193 Uniprot:F1NSZ5
Length = 1766
Score = 143 (55.4 bits), Expect = 2.9e-06, P = 2.9e-06
Identities = 31/93 (33%), Positives = 45/93 (48%)
Query: 202 CKCNGHASRCIKSPQGELVC-ECRHNTAGKDCEKCKPFFSDRPWGRATVYDANECKGGRC 260
C CNG+A+RC+ G +C +C+ NT G+ CE+C F G A + C
Sbjct: 16 CNCNGNANRCL---DGSGICVDCQRNTTGEHCEQCPDGFVGDVVGGAPTF-CQPCPCPLP 71
Query: 261 KCNGHASRCIKSPQGALVCECRHNTAGKDCEKC 293
+ A C + G + C C+ N AG +CE C
Sbjct: 72 EAANFAVSCYRK-NGNVRCVCKENYAGPNCESC 103
>UNIPROTKB|Q8MJ16 [details] [associations]
symbol:ATRN "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0040014 "regulation of multicellular organism growth"
evidence=IEA] [GO:0005615 "extracellular space" evidence=IEA]
[GO:0004872 "receptor activity" evidence=IEA] [GO:0016021 "integral
to membrane" evidence=IEA] [GO:0030246 "carbohydrate binding"
evidence=IEA] InterPro:IPR000742 InterPro:IPR001304
InterPro:IPR002165 InterPro:IPR006652 InterPro:IPR015915
Pfam:PF01344 Pfam:PF01437 PROSITE:PS50026 PROSITE:PS50041
SMART:SM00034 SMART:SM00181 GO:GO:0016021 GO:GO:0005615
GO:GO:0030246 Gene3D:3.10.100.10 InterPro:IPR016186
InterPro:IPR016187 SUPFAM:SSF56436 GO:GO:0040014 GO:GO:0004872
InterPro:IPR013032 PROSITE:PS00022 Gene3D:2.120.10.80
InterPro:IPR002049 SMART:SM00180 PROSITE:PS01248 PROSITE:PS50027
Gene3D:2.60.120.290 InterPro:IPR000859 Pfam:PF00431 SMART:SM00042
SUPFAM:SSF49854 PROSITE:PS01180 HSSP:P02468 HOVERGEN:HBG004312
InterPro:IPR003659 SMART:SM00423 GeneTree:ENSGT00390000001118
HOGENOM:HOG000231727 CTD:8455 OMA:NPLKGTC EMBL:DAAA02036180
EMBL:DAAA02036185 EMBL:DAAA02036181 EMBL:DAAA02036182
EMBL:DAAA02036183 EMBL:DAAA02036184 EMBL:AF531101 IPI:IPI00697240
IPI:IPI01002340 RefSeq:NP_776420.1 UniGene:Bt.12296 STRING:Q8MJ16
Ensembl:ENSBTAT00000039853 GeneID:281017 KEGG:bta:281017
InParanoid:Q8MJ16 NextBio:20805109 Uniprot:Q8MJ16
Length = 1415
Score = 140 (54.3 bits), Expect = 3.4e-06, Sum P(2) = 3.4e-06
Identities = 34/94 (36%), Positives = 49/94 (52%)
Query: 202 CKCNGHASRCIKSPQGELVCE-CRHNTAGKDCEKCKPFFSDRPWGRATVYDANECKGGRC 260
C+CNGH S+CI + +CE C + T GK CE C F +G T + +C+ C
Sbjct: 1049 CQCNGH-SKCIN----QSICEKCENLTTGKHCETCISGF----YGDPT--NGGKCQP--C 1095
Query: 261 KCNGHASRCIKSPQGALVCECRHNTAGKDCEKCK 294
+CNGHAS C + G C + G +C+ C+
Sbjct: 1096 RCNGHASLC-NTNTGKCFCTTK-GVKGDECQLCE 1127
Score = 47 (21.6 bits), Expect = 3.4e-06, Sum P(2) = 3.4e-06
Identities = 10/39 (25%), Positives = 17/39 (43%)
Query: 37 CIPDFVNAAFGQ-EVKVNSVCGLESPERYCDTSGACHVC 74
C+P + GQ + C ++P YC+ +C C
Sbjct: 713 CVPTNHSCTEGQISIFKYDHCPKDNPMYYCNKKTSCRSC 751
>UNIPROTKB|F1S8B6 [details] [associations]
symbol:ATRN "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0040014 "regulation of multicellular organism growth"
evidence=IEA] [GO:0005615 "extracellular space" evidence=IEA]
[GO:0004872 "receptor activity" evidence=IEA] [GO:0016021 "integral
to membrane" evidence=IEA] [GO:0030246 "carbohydrate binding"
evidence=IEA] InterPro:IPR000742 InterPro:IPR001304
InterPro:IPR002165 InterPro:IPR006652 InterPro:IPR015915
Pfam:PF01344 Pfam:PF01437 PROSITE:PS50026 PROSITE:PS50041
SMART:SM00034 SMART:SM00181 GO:GO:0016021 GO:GO:0005615
GO:GO:0030246 Gene3D:3.10.100.10 InterPro:IPR016186
InterPro:IPR016187 SUPFAM:SSF56436 GO:GO:0040014 GO:GO:0004872
InterPro:IPR013032 PROSITE:PS00022 Gene3D:2.120.10.80
InterPro:IPR002049 SMART:SM00180 PROSITE:PS01248 PROSITE:PS50027
Gene3D:2.60.120.290 InterPro:IPR000859 Pfam:PF00431 SMART:SM00042
SUPFAM:SSF49854 PROSITE:PS01180 InterPro:IPR003659 SMART:SM00423
GeneTree:ENSGT00390000001118 OMA:NPLKGTC EMBL:CU302393
EMBL:CU468397 Ensembl:ENSSSCT00000007826 Uniprot:F1S8B6
Length = 1416
Score = 140 (54.3 bits), Expect = 3.5e-06, Sum P(2) = 3.5e-06
Identities = 34/94 (36%), Positives = 49/94 (52%)
Query: 202 CKCNGHASRCIKSPQGELVCE-CRHNTAGKDCEKCKPFFSDRPWGRATVYDANECKGGRC 260
C+CNGH S+C+ + VCE C + T G+ CE C F +G T + +C+ C
Sbjct: 1050 CQCNGH-SKCVN----QSVCEKCENLTTGRHCETCISGF----YGDPT--NGGKCQP--C 1096
Query: 261 KCNGHASRCIKSPQGALVCECRHNTAGKDCEKCK 294
KCNGHAS C + G C + G +C+ C+
Sbjct: 1097 KCNGHASLC-NTNTGKCFCTTK-GVKGDECQLCE 1128
Score = 47 (21.6 bits), Expect = 3.5e-06, Sum P(2) = 3.5e-06
Identities = 10/39 (25%), Positives = 17/39 (43%)
Query: 37 CIPDFVNAAFGQ-EVKVNSVCGLESPERYCDTSGACHVC 74
C+P + GQ + C ++P YC+ +C C
Sbjct: 714 CVPMNHSCTEGQISIAKYENCPKDNPMYYCNKKTSCRSC 752
>RGD|1562668 [details] [associations]
symbol:Lamb3 "laminin, beta 3" species:10116 "Rattus norvegicus"
[GO:0005575 "cellular_component" evidence=ND] [GO:0005604 "basement
membrane" evidence=ISO] [GO:0005610 "laminin-5 complex"
evidence=ISO] [GO:0008150 "biological_process" evidence=ND]
[GO:0032403 "protein complex binding" evidence=IDA] [GO:0050873
"brown fat cell differentiation" evidence=ISO] RGD:1562668
GO:GO:0032403 GO:GO:0050873 InterPro:IPR008211 Pfam:PF00055
SMART:SM00136 PROSITE:PS51117 GO:GO:0005610 eggNOG:NOG289025
HOGENOM:HOG000113279 OrthoDB:EOG4JDH5Z IPI:IPI00363443
UniGene:Rn.49634 EMBL:Y08883 STRING:P70637 InParanoid:P70637
ArrayExpress:P70637 Genevestigator:P70637 Uniprot:P70637
Length = 131
Score = 113 (44.8 bits), Expect = 3.8e-06, P = 3.8e-06
Identities = 35/130 (26%), Positives = 61/130 (46%)
Query: 71 CHVCDAGSPRGRFPAEYLTDLNNPSNVTCWRSEAQTSVNSLSASPDNVTLTLSLGKKFEL 130
C CD+ PR + + + ++ + S W ++Q V SP V+L L L K+ +L
Sbjct: 3 CCKCDSRLPRN-YNSHRVENVVSSSGPMRWW-QSQNDV-----SP--VSLQLDLDKRMQL 53
Query: 131 TYISLSFCPKSIKPDSLAIYKSQDFGKSWQPLQFYSSQCKKLYGRTATGVISRGNEQEAL 190
I + F K + P + I +S DFGK+W+ Q+ ++ C + + G N Q+
Sbjct: 54 QDIMMDF--KGLMPAGMLIERSSDFGKTWRVYQYLATDCASTFPQVHQG--QPKNWQDVR 109
Query: 191 CTDRHKKQGG 200
C ++ G
Sbjct: 110 CRPLSQRPNG 119
>ZFIN|ZDB-GENE-090312-21 [details] [associations]
symbol:atrn "attractin" species:7955 "Danio rerio"
[GO:0016020 "membrane" evidence=IEA] [GO:0030246 "carbohydrate
binding" evidence=IEA] [GO:0016021 "integral to membrane"
evidence=IEA] InterPro:IPR000742 InterPro:IPR001304
InterPro:IPR002165 InterPro:IPR015915 Pfam:PF01437 PROSITE:PS50026
PROSITE:PS50041 SMART:SM00034 SMART:SM00181 ZFIN:ZDB-GENE-090312-21
GO:GO:0016021 GO:GO:0030246 Gene3D:3.10.100.10 InterPro:IPR016186
InterPro:IPR016187 SUPFAM:SSF56436 InterPro:IPR013032
PROSITE:PS00022 Gene3D:2.120.10.80 PROSITE:PS01186
InterPro:IPR002049 SMART:SM00180 PROSITE:PS01248 PROSITE:PS50027
Gene3D:2.60.120.290 InterPro:IPR000859 Pfam:PF00431 SMART:SM00042
SUPFAM:SSF49854 PROSITE:PS01180 InterPro:IPR003659 SMART:SM00423
GeneTree:ENSGT00390000001118 EMBL:CR388098 EMBL:CR589874
EMBL:CT583702 IPI:IPI00806015 ProteinModelPortal:F1Q5V0
Ensembl:ENSDART00000089528 ArrayExpress:F1Q5V0 Bgee:F1Q5V0
Uniprot:F1Q5V0
Length = 1383
Score = 139 (54.0 bits), Expect = 6.2e-06, P = 6.2e-06
Identities = 36/94 (38%), Positives = 45/94 (47%)
Query: 202 CKCNGHASRCIKSPQGELVCE-CRHNTAGKDCEKCKPFFSDRPWGRATVYDANECKGGRC 260
C+CNGH+S C+ E VCE C T GK CE C + +G T + C+ C
Sbjct: 1017 CQCNGHSS-CVN----ESVCERCEDLTTGKQCESCISGY----YGDPT--NGGSCQP--C 1063
Query: 261 KCNGHASRCIKSPQGALVCECRHNTAGKDCEKCK 294
KCNGHAS C S G C + G C C+
Sbjct: 1064 KCNGHASMC-NSNNGKCFCTTK-GIKGDRCHVCE 1095
>UNIPROTKB|F1MYX9 [details] [associations]
symbol:LAMA4 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0050873 "brown fat cell differentiation" evidence=IEA]
[GO:0001568 "blood vessel development" evidence=IEA] [GO:0045995
"regulation of embryonic development" evidence=IEA] [GO:0030334
"regulation of cell migration" evidence=IEA] [GO:0030155
"regulation of cell adhesion" evidence=IEA] [GO:0007155 "cell
adhesion" evidence=IEA] [GO:0005606 "laminin-1 complex"
evidence=IEA] [GO:0005102 "receptor binding" evidence=IEA]
InterPro:IPR009254 InterPro:IPR010307 Pfam:PF06008 Pfam:PF06009
GO:GO:0030155 GO:GO:0050873 GO:GO:0007155 Gene3D:2.60.120.200
InterPro:IPR008985 InterPro:IPR013320 SUPFAM:SSF49899 GO:GO:0030334
InterPro:IPR002049 InterPro:IPR001791 Pfam:PF00053 SMART:SM00180
SMART:SM00282 PROSITE:PS01248 PROSITE:PS50027 PROSITE:PS50025
GO:GO:0001568 Pfam:PF02210 GO:GO:0045995
GeneTree:ENSGT00700000104140 GO:GO:0005606 CTD:3910 KO:K06241
OMA:QLDDYNA EMBL:DAAA02025880 EMBL:DAAA02025869 EMBL:DAAA02025870
EMBL:DAAA02025871 EMBL:DAAA02025872 EMBL:DAAA02025873
EMBL:DAAA02025874 EMBL:DAAA02025875 EMBL:DAAA02025876
EMBL:DAAA02025877 EMBL:DAAA02025878 EMBL:DAAA02025879
IPI:IPI01003454 RefSeq:NP_001192894.1 UniGene:Bt.33367
ProteinModelPortal:F1MYX9 PRIDE:F1MYX9 Ensembl:ENSBTAT00000011612
GeneID:529670 KEGG:bta:529670 NextBio:20875080 Uniprot:F1MYX9
Length = 1824
Score = 138 (53.6 bits), Expect = 1.1e-05, P = 1.1e-05
Identities = 32/102 (31%), Positives = 46/102 (45%)
Query: 202 CKCNGHASRCIKSPQGELVC-ECRHNTAGKDCEKCKP-FFSDRPWGRATVYDANECKGGR 259
C CNG+++ C+ G +C C+ NT G+ CEKC + D G C
Sbjct: 82 CDCNGNSNECL---DGSGLCVHCQRNTTGEHCEKCLDGYIGDAIRGPPRFCQPCPCPLPH 138
Query: 260 CKCNGHASRCIKSPQGALVCECRHNTAGKDCEKCKPFFSDRP 301
A C + GA+ C C+ N AG +CE+C P + P
Sbjct: 139 VA--NFAESCYRK-NGAVRCICKENYAGPNCERCAPGYYGNP 177
>UNIPROTKB|Q16363 [details] [associations]
symbol:LAMA4 "Laminin subunit alpha-4" species:9606 "Homo
sapiens" [GO:0005102 "receptor binding" evidence=IEA] [GO:0005606
"laminin-1 complex" evidence=IEA] [GO:0030155 "regulation of cell
adhesion" evidence=IEA] [GO:0030334 "regulation of cell migration"
evidence=IEA] [GO:0045995 "regulation of embryonic development"
evidence=IEA] [GO:0007155 "cell adhesion" evidence=IEA] [GO:0001568
"blood vessel development" evidence=IEA] [GO:0050873 "brown fat
cell differentiation" evidence=IEA] [GO:0005604 "basement membrane"
evidence=IDA] [GO:0070062 "extracellular vesicular exosome"
evidence=IDA] [GO:0005201 "extracellular matrix structural
constituent" evidence=TAS] [GO:0005605 "basal lamina" evidence=TAS]
[GO:0031012 "extracellular matrix" evidence=ISS] InterPro:IPR009254
InterPro:IPR010307 Pfam:PF06008 Pfam:PF06009
Pathway_Interaction_DB:a6b1_a6b4_integrin_pathway GO:GO:0030155
GO:GO:0070062 GO:GO:0050873 GO:GO:0007155 PROSITE:PS00022
Gene3D:2.60.120.200 InterPro:IPR008985 InterPro:IPR013320
SUPFAM:SSF49899 GO:GO:0030334 GO:GO:0005605 InterPro:IPR002049
InterPro:IPR001791 Pfam:PF00053 SMART:SM00180 SMART:SM00282
PROSITE:PS01248 PROSITE:PS50027 PROSITE:PS50025 GO:GO:0001568
Pathway_Interaction_DB:amb2_neutrophils_pathway
Pathway_Interaction_DB:foxm1pathway Pfam:PF02210 GO:GO:0045995
GO:GO:0005201 eggNOG:NOG247347 GO:GO:0005606 EMBL:S78569
EMBL:X91171 EMBL:X70904 EMBL:AB210027 EMBL:BT006690 EMBL:Z99289
EMBL:AL590106 EMBL:BC004241 EMBL:Y14240 EMBL:X76939 IPI:IPI00024406
IPI:IPI00329482 IPI:IPI00735310 PIR:S68960 RefSeq:NP_001098676.2
RefSeq:NP_001098677.2 RefSeq:NP_001098678.1 RefSeq:NP_001098679.1
RefSeq:NP_002281.3 UniGene:Hs.654572 ProteinModelPortal:Q16363
SMR:Q16363 IntAct:Q16363 MINT:MINT-1200879 STRING:Q16363
PhosphoSite:Q16363 DMDM:292495093 PaxDb:Q16363 PRIDE:Q16363
DNASU:3910 Ensembl:ENST00000230538 Ensembl:ENST00000368638
Ensembl:ENST00000389463 Ensembl:ENST00000424408
Ensembl:ENST00000453937 Ensembl:ENST00000455073
Ensembl:ENST00000522006 Ensembl:ENST00000578470
Ensembl:ENST00000584877 Ensembl:ENST00000584945 GeneID:3910
KEGG:hsa:3910 UCSC:uc003pvt.2 UCSC:uc003pvu.2 UCSC:uc010kdz.1
CTD:3910 GeneCards:GC06M112475 HGNC:HGNC:6484 HPA:HPA015693
MIM:600133 neXtProt:NX_Q16363 PharmGKB:PA30273 HOVERGEN:HBG052299
InParanoid:Q16363 KO:K06241 OMA:QLDDYNA OrthoDB:EOG4QFWCB
PhylomeDB:Q16363 ChiTaRS:LAMA4 GenomeRNAi:3910 NextBio:15351
ArrayExpress:Q16363 Bgee:Q16363 CleanEx:HS_LAMA4
Genevestigator:Q16363 GermOnline:ENSG00000112769 Uniprot:Q16363
Length = 1823
Score = 136 (52.9 bits), Expect = 1.8e-05, P = 1.8e-05
Identities = 33/101 (32%), Positives = 46/101 (45%)
Query: 202 CKCNGHASRCIKSPQGELVCECRHNTAGKDCEKCKP-FFSDRPWGRATVYDANECKGGRC 260
C CNG+++ C+ G V C+ NT G+ CEKC + D G A + C
Sbjct: 82 CDCNGNSNECLDG-SGYCV-HCQRNTTGEHCEKCLDGYIGDSIRG-APQF-CQPCPCPLP 137
Query: 261 KCNGHASRCIKSPQGALVCECRHNTAGKDCEKCKPFFSDRP 301
A C + GA+ C C N AG +CE+C P + P
Sbjct: 138 HLANFAESCYRK-NGAVRCICNENYAGPNCERCAPGYYGNP 177
>UNIPROTKB|F1P2W2 [details] [associations]
symbol:ATRN "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0030246 "carbohydrate binding" evidence=IEA]
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0004872
"receptor activity" evidence=IEA] [GO:0005615 "extracellular space"
evidence=IEA] [GO:0040014 "regulation of multicellular organism
growth" evidence=IEA] InterPro:IPR000742 InterPro:IPR001304
InterPro:IPR002165 InterPro:IPR006652 InterPro:IPR015915
Pfam:PF01344 Pfam:PF01437 PROSITE:PS50026 PROSITE:PS50041
SMART:SM00034 SMART:SM00181 GO:GO:0016021 GO:GO:0005615
GO:GO:0030246 Gene3D:3.10.100.10 InterPro:IPR016186
InterPro:IPR016187 SUPFAM:SSF56436 GO:GO:0040014 GO:GO:0004872
InterPro:IPR013032 PROSITE:PS00022 Gene3D:2.120.10.80
InterPro:IPR002049 SMART:SM00180 PROSITE:PS01248 PROSITE:PS50027
Gene3D:2.60.120.290 InterPro:IPR000859 Pfam:PF00431 SMART:SM00042
SUPFAM:SSF49854 PROSITE:PS01180 InterPro:IPR003659 SMART:SM00423
GeneTree:ENSGT00390000001118 OMA:NPLKGTC EMBL:AADN02048964
EMBL:AADN02048965 EMBL:AADN02048966 EMBL:AADN02048967
EMBL:AADN02048968 EMBL:AADN02048969 EMBL:AADN02048970
EMBL:AADN02048971 EMBL:AADN02048972 EMBL:AADN02048973
EMBL:AADN02048974 EMBL:AADN02048975 EMBL:AADN02048976
EMBL:AADN02048977 EMBL:AADN02048978 EMBL:AADN02048979
EMBL:AADN02048980 EMBL:AADN02048981 IPI:IPI00572900
ProteinModelPortal:F1P2W2 Ensembl:ENSGALT00000025829 Uniprot:F1P2W2
Length = 1296
Score = 141 (54.7 bits), Expect = 2.3e-05, Sum P(2) = 2.3e-05
Identities = 39/113 (34%), Positives = 54/113 (47%)
Query: 189 ALCTDRHKK-----QGGRCKCNGHASRCIKSPQGELVCE-CRHNTAGKDCEKC-KPFFSD 241
++C + H Q C+CNGH S+CI E +CE C + T GK CE C ++ D
Sbjct: 910 SMCLEEHNYNWSFIQCPACQCNGH-SKCIN----ESICEKCENLTTGKHCETCISGYYGD 964
Query: 242 RPWGRATVYDANECKGGRCKCNGHASRCIKSPQGALVCECRHNTAGKDCEKCK 294
P T C+ CKCNGHAS C + G C + G +C+ C+
Sbjct: 965 -PTNGGT------CQP--CKCNGHASVC-NTNTGKCFCTTK-GIKGDECQLCE 1006
Score = 37 (18.1 bits), Expect = 2.3e-05, Sum P(2) = 2.3e-05
Identities = 9/41 (21%), Positives = 19/41 (46%)
Query: 36 RCIPDFVNAAFGQEVKVNSV--CGLESPERYCDTSGACHVC 74
+CI N ++V + + C ++P +C+ +C C
Sbjct: 591 QCI-SMHNNCTEEQVPITAYENCPKDNPAYHCNKRTSCKSC 630
>MGI|MGI:109321 [details] [associations]
symbol:Lama4 "laminin, alpha 4" species:10090 "Mus musculus"
[GO:0001568 "blood vessel development" evidence=IMP] [GO:0005102
"receptor binding" evidence=IEA] [GO:0005576 "extracellular region"
evidence=IEA] [GO:0005578 "proteinaceous extracellular matrix"
evidence=IEA] [GO:0005604 "basement membrane" evidence=ISO;IDA]
[GO:0005605 "basal lamina" evidence=IDA] [GO:0005606 "laminin-1
complex" evidence=IEA] [GO:0007155 "cell adhesion" evidence=IEA]
[GO:0030155 "regulation of cell adhesion" evidence=IEA] [GO:0030334
"regulation of cell migration" evidence=IEA] [GO:0045995
"regulation of embryonic development" evidence=IEA] [GO:0050873
"brown fat cell differentiation" evidence=IDA] [GO:0070062
"extracellular vesicular exosome" evidence=ISO] InterPro:IPR009254
InterPro:IPR010307 Pfam:PF06008 Pfam:PF06009 MGI:MGI:109321
GO:GO:0030155 GO:GO:0050873 GO:GO:0007155 PROSITE:PS00022
Gene3D:2.60.120.200 InterPro:IPR008985 InterPro:IPR013320
SUPFAM:SSF49899 GO:GO:0030334 GO:GO:0005605 InterPro:IPR002049
InterPro:IPR001791 Pfam:PF00053 SMART:SM00180 SMART:SM00282
PROSITE:PS01248 PROSITE:PS50027 PROSITE:PS50025 GO:GO:0001568
Pfam:PF02210 GO:GO:0045995 GeneTree:ENSGT00700000104140
eggNOG:NOG247347 GO:GO:0005606 CTD:3910 HOVERGEN:HBG052299
KO:K06241 OMA:QLDDYNA OrthoDB:EOG4QFWCB ChiTaRS:LAMA4 EMBL:U58950
EMBL:Y09827 EMBL:U59865 EMBL:BC115942 EMBL:U88352 EMBL:U69176
IPI:IPI00223446 RefSeq:NP_034811.2 UniGene:Mm.258065
ProteinModelPortal:P97927 SMR:P97927 STRING:P97927
PhosphoSite:P97927 PaxDb:P97927 PRIDE:P97927
Ensembl:ENSMUST00000019992 GeneID:16775 KEGG:mmu:16775
UCSC:uc007evq.2 HOGENOM:HOG000113278 InParanoid:Q14BF2
NextBio:290616 Bgee:P97927 CleanEx:MM_LAMA4 Genevestigator:P97927
GermOnline:ENSMUSG00000019846 Uniprot:P97927
Length = 1816
Score = 135 (52.6 bits), Expect = 2.3e-05, P = 2.3e-05
Identities = 32/102 (31%), Positives = 44/102 (43%)
Query: 202 CKCNGHASRCIKSPQGELVC-ECRHNTAGKDCEKCKP-FFSDRPWGRATVYDANECKGGR 259
C CNG++ C+ G C C+ NT G+ CEKC + D R T C
Sbjct: 82 CDCNGNSHECL---DGSGFCLHCQRNTTGEHCEKCLDGYIGDSI--RGTPRFCQPCPCPL 136
Query: 260 CKCNGHASRCIKSPQGALVCECRHNTAGKDCEKCKPFFSDRP 301
A C + GA+ C C+ N G +CE+C P + P
Sbjct: 137 PHLANFAESCYRK-NGAVRCICKENYVGPNCERCAPGYYGNP 177
>ZFIN|ZDB-GENE-000329-4 [details] [associations]
symbol:notch2 "notch homolog 2" species:7955 "Danio
rerio" [GO:0030154 "cell differentiation" evidence=IEA] [GO:0050793
"regulation of developmental process" evidence=IEA] [GO:0007219
"Notch signaling pathway" evidence=IEA] [GO:0016020 "membrane"
evidence=IEA] [GO:0005509 "calcium ion binding" evidence=IEA]
[GO:0007275 "multicellular organismal development" evidence=IEA]
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0060351
"cartilage development involved in endochondral bone morphogenesis"
evidence=IGI] [GO:0060325 "face morphogenesis" evidence=IGI]
[GO:0042246 "tissue regeneration" evidence=IEP] [GO:0001889 "liver
development" evidence=IGI] [GO:0001946 "lymphangiogenesis"
evidence=IMP] InterPro:IPR002110 InterPro:IPR000742
InterPro:IPR000800 InterPro:IPR001881 InterPro:IPR008297
InterPro:IPR010660 InterPro:IPR011656 InterPro:IPR018097
Pfam:PF00008 Pfam:PF00066 Pfam:PF06816 Pfam:PF07645 Pfam:PF07684
PIRSF:PIRSF002279 PRINTS:PR01452 PROSITE:PS01187 PROSITE:PS50026
PROSITE:PS50088 PROSITE:PS50258 SMART:SM00004 SMART:SM00179
SMART:SM00181 SMART:SM00248 InterPro:IPR000152
ZFIN:ZDB-GENE-000329-4 GO:GO:0016021 GO:GO:0030154
Gene3D:1.25.40.20 InterPro:IPR020683 Pfam:PF12796 SUPFAM:SSF48403
PROSITE:PS50297 GO:GO:0007219 GO:GO:0005509 GO:GO:0001889
InterPro:IPR013032 PROSITE:PS00022 GO:GO:0001946 PROSITE:PS01186
GO:GO:0042246 PROSITE:PS00010 GO:GO:0050793 GO:GO:0060325
GO:GO:0060351 Pfam:PF12661 GeneTree:ENSGT00700000104305
SUPFAM:SSF90193 InterPro:IPR024600 Pfam:PF11936 InterPro:IPR022336
PRINTS:PR01985 EMBL:CT573380 EMBL:FP016062 IPI:IPI00997919
Ensembl:ENSDART00000032967 Ensembl:ENSDART00000123104
Uniprot:F1R9H8
Length = 2475
Score = 112 (44.5 bits), Expect = 2.5e-05, Sum P(2) = 2.5e-05
Identities = 82/315 (26%), Positives = 124/315 (39%)
Query: 14 GAVCGEKID-LNSDPCYENGRPRRCIPDFVNAAFGQ-EVKVNSV-CGLESP---ERYCDT 67
G C E++D S+PC+ G C D+VN+ Q + + C + P E C
Sbjct: 944 GERCEEEVDECASNPCWNGGH---CT-DYVNSYTCQCPPGYDGINCERDIPDCTETSCLN 999
Query: 68 SGAC-HVCDAGSPRGR--FPAEYLT-DLNNPSNVTCWRSEAQTSVNSLSASPDNVTLTLS 123
+G C + S R R F +Y +LN + C T ++ L N L +
Sbjct: 1000 NGTCVDGINHFSCRCRQGFSGQYCQFELNECDSHPC--KNGGTCIDGLGTFHCNCPLMYN 1057
Query: 124 LGKKFELTYISLSFCPK-SIKPDSLAIYKSQDFGKSWQPLQFYSSQCKKLYGRTATGV-I 181
GK E + ++L C + + I K ++ S QP + C + + V +
Sbjct: 1058 -GKTCE-SMVNL--CSQIKCQNGGTCIQKEINWRCSCQP-GWTGLYCD-IPSMSCHAVAL 1111
Query: 182 SRGNEQEALCTDR-HKKQGG---RCKCN-GHASRCIKSPQGE-LVCECRHN------TAG 229
++G + +C H K G +C+C G+ ++ E L CR+ G
Sbjct: 1112 NKGVAENMVCKHAGHCKNIGNTHQCECQKGYTGSYCETEIDECLSSPCRNGGTCVDYQGG 1171
Query: 230 KDCEKCKPFFSDRPWGRATVYDANECKGGRCKCNGHASRCIKSPQGALVCECRHNTAGKD 289
DC KCK F G Y+ NEC+ C+ NG CI C C T G
Sbjct: 1172 YDC-KCKAGFQ----GVNCEYNVNECQSNPCR-NG--GTCIDLINH-FSCSCPPGTKGLQ 1222
Query: 290 CE----KCKPFFSDR 300
CE +C P F R
Sbjct: 1223 CEVDVDECAPEFGPR 1237
Score = 74 (31.1 bits), Expect = 2.5e-05, Sum P(2) = 2.5e-05
Identities = 16/37 (43%), Positives = 22/37 (59%)
Query: 8 CVPLLIGAVCGEKI-DLNSDPCYENGRPRRCIPDFVN 43
C+P +G +C E+I + SDPC GR C+ D VN
Sbjct: 596 CLPGYMGPICSEQIRECQSDPCQNGGR---CV-DMVN 628
>ZFIN|ZDB-GENE-030131-230 [details] [associations]
symbol:si:ch211-241e1.3 "si:ch211-241e1.3"
species:7955 "Danio rerio" [GO:0030334 "regulation of cell
migration" evidence=IEA] [GO:0005604 "basement membrane"
evidence=IEA] [GO:0045995 "regulation of embryonic development"
evidence=IEA] [GO:0005606 "laminin-1 complex" evidence=IEA]
[GO:0030155 "regulation of cell adhesion" evidence=IEA] [GO:0005102
"receptor binding" evidence=IEA] [GO:0007155 "cell adhesion"
evidence=IEA] InterPro:IPR009254 InterPro:IPR010307 Pfam:PF06008
Pfam:PF06009 ZFIN:ZDB-GENE-030131-230 GO:GO:0030155 GO:GO:0007155
Gene3D:2.60.120.200 InterPro:IPR008985 InterPro:IPR013320
SUPFAM:SSF49899 GO:GO:0030334 InterPro:IPR002049 InterPro:IPR001791
Pfam:PF00053 Pfam:PF00054 SMART:SM00180 SMART:SM00282
PROSITE:PS01248 PROSITE:PS50027 PROSITE:PS50025 Pfam:PF02210
GO:GO:0045995 EMBL:AL935300 GO:GO:0005606
GeneTree:ENSGT00700000104042 IPI:IPI00484822
Ensembl:ENSDART00000058281 ArrayExpress:F1R4X8 Bgee:F1R4X8
Uniprot:F1R4X8
Length = 1368
Score = 133 (51.9 bits), Expect = 2.8e-05, P = 2.8e-05
Identities = 34/100 (34%), Positives = 49/100 (49%)
Query: 202 CKCNGHASRCIKSPQGELVCECRHNTAGKDCEKCKPFFSDRPWGRAT-VYDANECKGGRC 260
C CNGH++ C ++ G + C NTAG+ CE CK F W A A C G
Sbjct: 126 CSCNGHSNECEENT-GRCL-NCADNTAGQRCELCKEGFY---WSEARRKCTACPCPLGN- 179
Query: 261 KCNGHASRCIKSPQGALVCECRHNTAGKDCEKCKP-FFSD 299
+ N A C ++ Q + C C+ AG+ CE+C ++ D
Sbjct: 180 QDNNFAVGCTET-QSRIQCVCKTGHAGERCERCASGYYGD 218
>UNIPROTKB|F1PR66 [details] [associations]
symbol:LAMA4 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0045995 "regulation of embryonic development"
evidence=IEA] [GO:0030334 "regulation of cell migration"
evidence=IEA] [GO:0030155 "regulation of cell adhesion"
evidence=IEA] [GO:0007155 "cell adhesion" evidence=IEA] [GO:0005606
"laminin-1 complex" evidence=IEA] [GO:0005102 "receptor binding"
evidence=IEA] InterPro:IPR009254 InterPro:IPR010307 Pfam:PF06008
Pfam:PF06009 GO:GO:0030155 GO:GO:0007155 Gene3D:2.60.120.200
InterPro:IPR008985 InterPro:IPR013320 SUPFAM:SSF49899 GO:GO:0030334
InterPro:IPR002049 InterPro:IPR001791 Pfam:PF00053 SMART:SM00180
SMART:SM00282 PROSITE:PS01248 PROSITE:PS50027 PROSITE:PS50025
Pfam:PF02210 GO:GO:0045995 GeneTree:ENSGT00700000104140
GO:GO:0005606 OMA:QLDDYNA EMBL:AAEX03008620
Ensembl:ENSCAFT00000006483 Uniprot:F1PR66
Length = 1760
Score = 133 (51.9 bits), Expect = 3.7e-05, P = 3.7e-05
Identities = 32/102 (31%), Positives = 44/102 (43%)
Query: 202 CKCNGHASRCIKSPQGELVC-ECRHNTAGKDCEKCKP-FFSDRPWGRATVYDANECKGGR 259
C CNG++ C+ G C C+ NT G+ CEKC + D G C
Sbjct: 25 CVCNGNSDECL---DGSGFCVHCQRNTTGEHCEKCLDGYIGDSIRGPPRF--CQPCPCPL 79
Query: 260 CKCNGHASRCIKSPQGALVCECRHNTAGKDCEKCKPFFSDRP 301
A C + GA+ C C+ N AG +CE+C P + P
Sbjct: 80 PYVANFAESCYRK-NGAVRCICKENYAGPNCERCAPGYYGNP 120
>UNIPROTKB|F1MXV1 [details] [associations]
symbol:ATRNL1 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0007186 "G-protein coupled receptor signaling pathway"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0030246 "carbohydrate binding" evidence=IEA] InterPro:IPR000742
InterPro:IPR001304 InterPro:IPR002165 InterPro:IPR015915
Pfam:PF01437 PROSITE:PS50026 PROSITE:PS50041 SMART:SM00034
SMART:SM00181 GO:GO:0016021 GO:GO:0030246 Gene3D:3.10.100.10
InterPro:IPR016186 InterPro:IPR016187 SUPFAM:SSF56436 GO:GO:0007186
InterPro:IPR013032 PROSITE:PS00022 Gene3D:2.120.10.80
InterPro:IPR002049 SMART:SM00180 PROSITE:PS01248 PROSITE:PS50027
Gene3D:2.60.120.290 InterPro:IPR000859 Pfam:PF00431 SMART:SM00042
SUPFAM:SSF49854 PROSITE:PS01180 OMA:YTQQKVS InterPro:IPR013111
InterPro:IPR003659 Pfam:PF07974 SMART:SM00423
GeneTree:ENSGT00390000001118 EMBL:DAAA02059311 EMBL:DAAA02059312
EMBL:DAAA02059313 EMBL:DAAA02059314 EMBL:DAAA02059315
EMBL:DAAA02059316 EMBL:DAAA02059317 EMBL:DAAA02059318
EMBL:DAAA02059319 EMBL:DAAA02059320 EMBL:DAAA02059321
IPI:IPI00699369 Ensembl:ENSBTAT00000023559 Uniprot:F1MXV1
Length = 1180
Score = 131 (51.2 bits), Expect = 4.0e-05, P = 4.0e-05
Identities = 35/100 (35%), Positives = 49/100 (49%)
Query: 202 CKCNGHASRCIKSPQGELVCE-CRHNTAGKDCEKCKPFFSDRPWGRATVYDANECKGGRC 260
C+CNGH S CI + VCE C++ T GK C+ C P + +G T + +C C
Sbjct: 972 CQCNGH-STCINNN----VCEQCKNLTTGKQCQDCMPGY----YGDPT--NGGQCTA--C 1018
Query: 261 KCNGHASRCIKSPQGALVCECRHNTAGKDCEKCKP--FFS 298
C+GHA+ C G C + G C+ CK F+S
Sbjct: 1019 TCSGHANIC-HMHTGKCFCTTK-GIKGDQCQFCKATHFYS 1056
>ZFIN|ZDB-GENE-030131-8092 [details] [associations]
symbol:atrnl1b "attractin-like 1b" species:7955
"Danio rerio" [GO:0030246 "carbohydrate binding" evidence=IEA]
[GO:0016020 "membrane" evidence=IEA] [GO:0016021 "integral to
membrane" evidence=IEA] InterPro:IPR000742 InterPro:IPR001304
InterPro:IPR002165 InterPro:IPR015915 Pfam:PF01437 PROSITE:PS50026
PROSITE:PS50041 SMART:SM00034 SMART:SM00181
ZFIN:ZDB-GENE-030131-8092 GO:GO:0016021 GO:GO:0030246
Gene3D:3.10.100.10 InterPro:IPR016186 InterPro:IPR016187
SUPFAM:SSF56436 InterPro:IPR013032 PROSITE:PS00022
Gene3D:2.120.10.80 Gene3D:2.130.10.80 InterPro:IPR015916
InterPro:IPR002049 SMART:SM00180 PROSITE:PS01248 PROSITE:PS50027
Gene3D:2.60.120.290 InterPro:IPR000859 Pfam:PF00431 SMART:SM00042
SUPFAM:SSF49854 PROSITE:PS01180 InterPro:IPR003659 SMART:SM00423
GeneTree:ENSGT00390000001118 EMBL:CU464184 EMBL:BX004794
IPI:IPI00834013 RefSeq:XP_697655.4 UniGene:Dr.81107
ProteinModelPortal:E7F6C7 Ensembl:ENSDART00000042514 GeneID:569196
KEGG:dre:569196 CTD:569196 NextBio:20889561 Bgee:E7F6C7
Uniprot:E7F6C7
Length = 1364
Score = 131 (51.2 bits), Expect = 4.7e-05, P = 4.7e-05
Identities = 32/92 (34%), Positives = 45/92 (48%)
Query: 202 CKCNGHASRCIKSPQGELVCECRHNTAGKDCEKCKPFFSDRPWGRATVYDANECKGGRCK 261
C+CNGH S C+ E +CR+ T G CE C P + +G T + +C+ CK
Sbjct: 998 CQCNGH-STCVNVSMCE---QCRNLTTGLHCETCLPGY----YGDPT--NGGKCQA--CK 1045
Query: 262 CNGHASRCIKSPQGALVCECRHNTAGKDCEKC 293
CNGHA+ C + G C + G C+ C
Sbjct: 1046 CNGHANMCHELT-GKCFCTTK-GIKGDQCQLC 1075
>UNIPROTKB|F1LWS0 [details] [associations]
symbol:Lama5 "Protein Lama5" species:10116 "Rattus
norvegicus" [GO:0005102 "receptor binding" evidence=IEA]
[GO:0005606 "laminin-1 complex" evidence=IEA] [GO:0007155 "cell
adhesion" evidence=IEA] [GO:0030155 "regulation of cell adhesion"
evidence=IEA] [GO:0030334 "regulation of cell migration"
evidence=IEA] [GO:0045995 "regulation of embryonic development"
evidence=IEA] InterPro:IPR009254 InterPro:IPR010307 Pfam:PF06008
Pfam:PF06009 RGD:621023 GO:GO:0030155 GO:GO:0007155
Gene3D:2.60.120.200 InterPro:IPR008985 InterPro:IPR013320
SUPFAM:SSF49899 GO:GO:0030334 InterPro:IPR002049 InterPro:IPR001791
Pfam:PF00053 SMART:SM00180 SMART:SM00282 PROSITE:PS01248
PROSITE:PS50027 PROSITE:PS50025 Pfam:PF02210 GO:GO:0045995
InterPro:IPR000034 Pfam:PF00052 PROSITE:PS51115 GO:GO:0005606
IPI:IPI00566251 Ensembl:ENSRNOT00000051597 ArrayExpress:F1LWS0
Uniprot:F1LWS0
Length = 1728
Score = 132 (51.5 bits), Expect = 4.8e-05, P = 4.8e-05
Identities = 29/84 (34%), Positives = 43/84 (51%)
Query: 220 VCECRHNTAGKDCEKCKP-FFSDRPWGRATVYDANECKGGRCKCNGHASRCIKSPQGALV 278
+C C N G C++C P ++ D G ++ C C+C+GH+ RC+ P
Sbjct: 73 LCMCPANYRGDSCQECAPGYYRDTK-G---LF-LGRCVP--CQCHGHSDRCL--PGSGTC 123
Query: 279 CECRHNTAGKDCEKCKP-FFSDRP 301
C+HNT G CE+C+P F S P
Sbjct: 124 VGCQHNTEGDQCERCRPGFVSSDP 147
>UNIPROTKB|E1BYK5 [details] [associations]
symbol:ATRNL1 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0030246 "carbohydrate binding" evidence=IEA]
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0007186
"G-protein coupled receptor signaling pathway" evidence=IEA]
InterPro:IPR000742 InterPro:IPR001304 InterPro:IPR002165
InterPro:IPR015915 Pfam:PF01437 PROSITE:PS50026 PROSITE:PS50041
SMART:SM00034 SMART:SM00181 GO:GO:0016021 GO:GO:0030246
Gene3D:3.10.100.10 InterPro:IPR016186 InterPro:IPR016187
SUPFAM:SSF56436 GO:GO:0007186 InterPro:IPR013032 PROSITE:PS00022
Gene3D:2.120.10.80 InterPro:IPR002049 Pfam:PF00053 SMART:SM00180
PROSITE:PS01248 PROSITE:PS50027 Gene3D:2.60.120.290
InterPro:IPR000859 Pfam:PF00431 SMART:SM00042 SUPFAM:SSF49854
PROSITE:PS01180 OMA:YTQQKVS InterPro:IPR013111 InterPro:IPR003659
Pfam:PF07974 SMART:SM00423 GeneTree:ENSGT00390000001118
EMBL:AADN02030934 IPI:IPI00585255 ProteinModelPortal:E1BYK5
Ensembl:ENSGALT00000014903 Uniprot:E1BYK5
Length = 1242
Score = 130 (50.8 bits), Expect = 5.4e-05, P = 5.4e-05
Identities = 33/93 (35%), Positives = 45/93 (48%)
Query: 202 CKCNGHASRCIKSPQGELVCE-CRHNTAGKDCEKCKPFFSDRPWGRATVYDANECKGGRC 260
C+CNGH S CI S VC+ C++ T GK CE C P + +G T + +C C
Sbjct: 1017 CQCNGH-STCINSN----VCDQCKNLTTGKQCETCMPGY----YGDPT--NGGQCTA--C 1063
Query: 261 KCNGHASRCIKSPQGALVCECRHNTAGKDCEKC 293
C+GHA+ C G C + G C+ C
Sbjct: 1064 TCSGHANIC-HMQTGKCFCTTK-GIKGDQCQLC 1094
>ZFIN|ZDB-GENE-081028-60 [details] [associations]
symbol:atrnl1a "attractin-like 1a" species:7955
"Danio rerio" [GO:0004872 "receptor activity" evidence=IEA]
[GO:0016020 "membrane" evidence=IEA] [GO:0007275 "multicellular
organismal development" evidence=IEA] [GO:0030246 "carbohydrate
binding" evidence=IEA] [GO:0016021 "integral to membrane"
evidence=IEA] InterPro:IPR000742 InterPro:IPR001304
InterPro:IPR002165 InterPro:IPR006652 InterPro:IPR015915
InterPro:IPR016201 Pfam:PF01344 Pfam:PF01437 PROSITE:PS50026
PROSITE:PS50041 SMART:SM00034 SMART:SM00181 ZFIN:ZDB-GENE-081028-60
GO:GO:0016021 GO:GO:0007275 GO:GO:0030246 Gene3D:3.10.100.10
InterPro:IPR016186 InterPro:IPR016187 SUPFAM:SSF56436 GO:GO:0004872
InterPro:IPR013032 PROSITE:PS00022 Gene3D:2.120.10.80
InterPro:IPR002049 SMART:SM00180 PROSITE:PS01248 PROSITE:PS50027
Gene3D:2.60.120.290 InterPro:IPR000859 Pfam:PF00431 SMART:SM00042
SUPFAM:SSF49854 PROSITE:PS01180 InterPro:IPR003659 SMART:SM00423
GeneTree:ENSGT00390000001118 SUPFAM:SSF103575 EMBL:AL954359
EMBL:CABZ01039684 EMBL:CABZ01039685 EMBL:CABZ01039686
EMBL:CABZ01039687 EMBL:CABZ01039688 EMBL:CABZ01039689
EMBL:CABZ01039690 EMBL:CABZ01039691 EMBL:CABZ01039692
EMBL:CABZ01039693 EMBL:CABZ01039694 EMBL:CABZ01039695
EMBL:CABZ01039696 EMBL:CR762487 EMBL:CT573136 IPI:IPI00836296
Ensembl:ENSDART00000089533 ArrayExpress:F1Q4X2 Bgee:F1Q4X2
Uniprot:F1Q4X2
Length = 1400
Score = 129 (50.5 bits), Expect = 8.1e-05, P = 8.1e-05
Identities = 32/93 (34%), Positives = 46/93 (49%)
Query: 202 CKCNGHASRCIKSPQGELVCE-CRHNTAGKDCEKCKPFFSDRPWGRATVYDANECKGGRC 260
C+CNGH S C+ VCE C++ TAG C+ C P + +G T + +C+ C
Sbjct: 1036 CQCNGH-STCVNGS----VCEQCKNLTAGLHCQFCLPGY----YGDPT--NGGKCQA--C 1082
Query: 261 KCNGHASRCIKSPQGALVCECRHNTAGKDCEKC 293
+CN HA+ C S G C + G C+ C
Sbjct: 1083 RCNNHANVC-HSSSGKCYCTTK-GVKGDQCQLC 1113
>FB|FBgn0039528 [details] [associations]
symbol:dsd "distracted" species:7227 "Drosophila
melanogaster" [GO:0005575 "cellular_component" evidence=ND]
[GO:0003674 "molecular_function" evidence=ND] [GO:0008039 "synaptic
target recognition" evidence=IMP] InterPro:IPR000742
InterPro:IPR015915 PROSITE:PS50026 SMART:SM00181 EMBL:AE014297
GO:GO:0016021 InterPro:IPR013032 PROSITE:PS00022 Gene3D:2.120.10.80
PROSITE:PS01186 InterPro:IPR002049 PROSITE:PS50027
Gene3D:2.60.120.290 InterPro:IPR000859 Pfam:PF00431 SMART:SM00042
SUPFAM:SSF49854 PROSITE:PS01180 InterPro:IPR003659 SMART:SM00423
GeneTree:ENSGT00390000001118 OMA:MVVIFGH FlyBase:FBgn0039528
RefSeq:NP_651571.3 UniGene:Dm.7161 ProteinModelPortal:Q9VB20
SMR:Q9VB20 MINT:MINT-977402 STRING:Q9VB20
EnsemblMetazoa:FBtr0301390 GeneID:43315 KEGG:dme:Dmel_CG5634
UCSC:CG5634-RA CTD:43315 InParanoid:Q9VB20 PhylomeDB:Q9VB20
GenomeRNAi:43315 NextBio:833301 ArrayExpress:Q9VB20 Bgee:Q9VB20
Uniprot:Q9VB20
Length = 1323
Score = 125 (49.1 bits), Expect = 0.00011, Sum P(2) = 0.00011
Identities = 32/93 (34%), Positives = 40/93 (43%)
Query: 201 RCKCNGHASRCIKSPQGELVCECRHNTAGKDCEKCKPFFSDRPWGRATVYDANECKGGRC 260
RC CNGH S C + Q C + T G CEKC+ + WG + +C+ RC
Sbjct: 948 RCNCNGH-SYC--NDQQHCEQPCNNLTTGAHCEKCRTGY----WGNPI--NGGKCQ--RC 996
Query: 261 KCNGHASRCIKSPQGALVCECRHNTAGKDCEKC 293
CNG C G C + G CEKC
Sbjct: 997 DCNGQGVYC-HPDTGKCFCTTK-GIVGDHCEKC 1027
Score = 48 (22.0 bits), Expect = 0.00011, Sum P(2) = 0.00011
Identities = 13/38 (34%), Positives = 17/38 (44%)
Query: 45 AFGQEVKVNSV-CGLESPERYCDTSGACHVCDAGSPRG 81
A G ++S CG + + C AC CD GS G
Sbjct: 881 AVGSTTALSSAQCGYYNSCQMCLDDPACGWCDNGSNTG 918
>UNIPROTKB|E2R6C0 [details] [associations]
symbol:ATRNL1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0007186 "G-protein coupled receptor signaling
pathway" evidence=IEA] [GO:0016021 "integral to membrane"
evidence=IEA] [GO:0030246 "carbohydrate binding" evidence=IEA]
InterPro:IPR000742 InterPro:IPR001304 InterPro:IPR002165
InterPro:IPR015915 Pfam:PF01437 PROSITE:PS50026 PROSITE:PS50041
SMART:SM00034 SMART:SM00181 GO:GO:0016021 GO:GO:0030246
Gene3D:3.10.100.10 InterPro:IPR016186 InterPro:IPR016187
SUPFAM:SSF56436 GO:GO:0007186 InterPro:IPR013032 PROSITE:PS00022
Gene3D:2.120.10.80 InterPro:IPR002049 SMART:SM00180 PROSITE:PS01248
PROSITE:PS50027 Gene3D:2.60.120.290 InterPro:IPR000859 Pfam:PF00431
SMART:SM00042 SUPFAM:SSF49854 PROSITE:PS01180 CTD:26033 OMA:YTQQKVS
InterPro:IPR013111 InterPro:IPR003659 Pfam:PF07974 SMART:SM00423
GeneTree:ENSGT00390000001118 EMBL:AAEX03015548 EMBL:AAEX03015549
EMBL:AAEX03015550 EMBL:AAEX03015551 EMBL:AAEX03015552
RefSeq:XP_544031.3 Ensembl:ENSCAFT00000018678 GeneID:486901
KEGG:cfa:486901 NextBio:20860606 Uniprot:E2R6C0
Length = 1381
Score = 126 (49.4 bits), Expect = 0.00017, P = 0.00017
Identities = 32/93 (34%), Positives = 45/93 (48%)
Query: 202 CKCNGHASRCIKSPQGELVCE-CRHNTAGKDCEKCKPFFSDRPWGRATVYDANECKGGRC 260
C+CNGH S CI + VCE C++ T GK C+ C P + +G T + +C C
Sbjct: 1015 CQCNGH-STCINNN----VCEQCKNLTTGKQCQDCMPGY----YGDPT--NGGQCTA--C 1061
Query: 261 KCNGHASRCIKSPQGALVCECRHNTAGKDCEKC 293
C+GHA+ C G C + G C+ C
Sbjct: 1062 TCSGHANIC-HMHTGKCFCTTK-GIKGDQCQLC 1092
>FB|FBgn0261451 [details] [associations]
symbol:trol "terribly reduced optic lobes" species:7227
"Drosophila melanogaster" [GO:0005578 "proteinaceous extracellular
matrix" evidence=NAS] [GO:0005604 "basement membrane" evidence=ISS]
[GO:0055059 "asymmetric neuroblast division" evidence=NAS]
[GO:0045199 "maintenance of epithelial cell apical/basal polarity"
evidence=IMP] [GO:0005811 "lipid particle" evidence=IDA]
[GO:0072347 "response to anesthetic" evidence=IMP]
InterPro:IPR000742 InterPro:IPR002172 InterPro:IPR007110
Pfam:PF00008 Pfam:PF00057 PROSITE:PS50026 PROSITE:PS50068
PROSITE:PS50835 SMART:SM00181 SMART:SM00192 Gene3D:2.60.40.10
InterPro:IPR013783 GO:GO:0005811 EMBL:AE014298 InterPro:IPR003599
SMART:SM00409 InterPro:IPR003598 SMART:SM00408 InterPro:IPR013032
PROSITE:PS00022 Gene3D:2.60.120.200 InterPro:IPR008985
InterPro:IPR013320 SUPFAM:SSF49899 PROSITE:PS01186
Gene3D:4.10.400.10 InterPro:IPR023415 SUPFAM:SSF57424
PROSITE:PS01209 InterPro:IPR002049 InterPro:IPR001791 Pfam:PF00053
Pfam:PF00054 SMART:SM00180 SMART:SM00282 PROSITE:PS01248
PROSITE:PS50027 PROSITE:PS50025 GO:GO:0005604 InterPro:IPR013098
Pfam:PF07679 GO:GO:0045199 GO:GO:0072347 InterPro:IPR009030
SUPFAM:SSF57184 Pfam:PF02210 InterPro:IPR018031 InterPro:IPR000034
Pfam:PF00052 SMART:SM00281 PROSITE:PS51115 UniGene:Dm.14114
GeneID:45320 KEGG:dme:Dmel_CG33950 CTD:45320 FlyBase:FBgn0261451
ChiTaRS:trol GenomeRNAi:45320 NextBio:838006 RefSeq:NP_001027038.2
ProteinModelPortal:Q9W4Y3 SMR:Q9W4Y3 STRING:Q9W4Y3 PRIDE:Q9W4Y3
UCSC:CG33950-RF InParanoid:Q9W4Y3 PhylomeDB:Q9W4Y3
ArrayExpress:Q9W4Y3 Bgee:Q9W4Y3 Uniprot:Q9W4Y3
Length = 4629
Score = 131 (51.2 bits), Expect = 0.00018, P = 0.00018
Identities = 33/91 (36%), Positives = 43/91 (47%)
Query: 221 CECRHNTAGKDCEKCKPFFSDRPWGRATVYDANECKGGRCKCNGHASRCIKSPQGALVCE 280
C C G CE+C P ++ P G +Y C+ C+CNGH+ C S G CE
Sbjct: 2429 CRCPEGYLGLSCEQCAPGYARDPEGG--IY-LGLCRP--CECNGHSKYC-NSDTGD--CE 2480
Query: 281 -CRHNTAGKDCEKCKP-FFSDRPWGRATVYD 309
C NT G CE+C + D R T+YD
Sbjct: 2481 ECSDNTEGPSCERCAAGYVGDAT--RGTIYD 2509
>UNIPROTKB|Q5VV63 [details] [associations]
symbol:ATRNL1 "Attractin-like protein 1" species:9606 "Homo
sapiens" [GO:0030246 "carbohydrate binding" evidence=IEA]
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0007186
"G-protein coupled receptor signaling pathway" evidence=IEA]
InterPro:IPR000742 InterPro:IPR001304 InterPro:IPR002165
InterPro:IPR015915 Pfam:PF01437 PROSITE:PS50026 PROSITE:PS50041
SMART:SM00034 SMART:SM00181 GO:GO:0016021 GO:GO:0030246
Gene3D:3.10.100.10 InterPro:IPR016186 InterPro:IPR016187
SUPFAM:SSF56436 PROSITE:PS00615 GO:GO:0007186 InterPro:IPR013032
PROSITE:PS00022 Gene3D:2.120.10.80 PROSITE:PS01186
InterPro:IPR002049 SMART:SM00180 PROSITE:PS01248 PROSITE:PS50027
Gene3D:2.60.120.290 InterPro:IPR000859 Pfam:PF00431 SMART:SM00042
SUPFAM:SSF49854 PROSITE:PS01180 EMBL:AY442317 EMBL:AL357059
EMBL:AC022542 EMBL:AC091667 EMBL:AL355530 EMBL:AL356100
EMBL:AL392087 EMBL:AL512304 EMBL:BC047716 EMBL:BC139916
EMBL:BC139923 EMBL:AK127277 EMBL:AB011106 IPI:IPI00297233
IPI:IPI00749514 PIR:T00266 RefSeq:NP_997186.1 UniGene:Hs.501127
HSSP:P02468 ProteinModelPortal:Q5VV63 SMR:Q5VV63 IntAct:Q5VV63
PhosphoSite:Q5VV63 DMDM:189081675 PRIDE:Q5VV63 DNASU:26033
Ensembl:ENST00000355044 GeneID:26033 KEGG:hsa:26033 UCSC:uc001lcf.3
UCSC:uc001lcg.3 CTD:26033 GeneCards:GC10P116843 H-InvDB:HIX0021959
HGNC:HGNC:29063 HPA:HPA038070 MIM:612869 neXtProt:NX_Q5VV63
PharmGKB:PA134961599 eggNOG:NOG242225 HOVERGEN:HBG004312
InParanoid:Q5VV63 OMA:YTQQKVS OrthoDB:EOG4QC14F PhylomeDB:Q5VV63
ChiTaRS:ATRNL1 GenomeRNAi:26033 NextBio:47842 ArrayExpress:Q5VV63
Bgee:Q5VV63 CleanEx:HS_ATRNL1 Genevestigator:Q5VV63
InterPro:IPR013111 InterPro:IPR003659 Pfam:PF07974 SMART:SM00423
Uniprot:Q5VV63
Length = 1379
Score = 125 (49.1 bits), Expect = 0.00022, P = 0.00022
Identities = 32/93 (34%), Positives = 45/93 (48%)
Query: 202 CKCNGHASRCIKSPQGELVCE-CRHNTAGKDCEKCKPFFSDRPWGRATVYDANECKGGRC 260
C+CNGH S CI + VCE C++ T GK C+ C P + +G T + +C C
Sbjct: 1014 CQCNGH-STCINNN----VCEQCKNLTTGKQCQDCMPGY----YGDPT--NGGQCTA--C 1060
Query: 261 KCNGHASRCIKSPQGALVCECRHNTAGKDCEKC 293
C+GHA+ C G C + G C+ C
Sbjct: 1061 TCSGHANIC-HLHTGKCFCTTK-GIKGDQCQLC 1091
>MGI|MGI:2147749 [details] [associations]
symbol:Atrnl1 "attractin like 1" species:10090 "Mus
musculus" [GO:0005515 "protein binding" evidence=IPI] [GO:0005575
"cellular_component" evidence=ND] [GO:0005886 "plasma membrane"
evidence=IEA] [GO:0007186 "G-protein coupled receptor signaling
pathway" evidence=IPI] [GO:0016020 "membrane" evidence=IEA]
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0030246
"carbohydrate binding" evidence=IEA] InterPro:IPR000742
InterPro:IPR001304 InterPro:IPR002165 InterPro:IPR015915
Pfam:PF01437 PROSITE:PS50026 PROSITE:PS50041 SMART:SM00034
SMART:SM00181 MGI:MGI:2147749 GO:GO:0016021 GO:GO:0005886
GO:GO:0030246 Gene3D:3.10.100.10 InterPro:IPR016186
InterPro:IPR016187 SUPFAM:SSF56436 PROSITE:PS00615 GO:GO:0007186
InterPro:IPR013032 PROSITE:PS00022 Gene3D:2.120.10.80
PROSITE:PS01186 InterPro:IPR002049 Pfam:PF00053 SMART:SM00180
PROSITE:PS01248 PROSITE:PS50027 Gene3D:2.60.120.290
InterPro:IPR000859 Pfam:PF00431 SMART:SM00042 SUPFAM:SSF49854
PROSITE:PS01180 HSSP:P02468 CTD:26033 eggNOG:NOG242225
HOVERGEN:HBG004312 OMA:YTQQKVS OrthoDB:EOG4QC14F ChiTaRS:ATRNL1
InterPro:IPR013111 InterPro:IPR003659 Pfam:PF07974 SMART:SM00423
EMBL:AY688677 EMBL:AK172967 EMBL:AK050882 EMBL:AK147492
EMBL:BC030872 EMBL:BC050020 IPI:IPI00462742 IPI:IPI00874371
IPI:IPI00895221 RefSeq:NP_852080.3 UniGene:Mm.245340
ProteinModelPortal:Q6A051 SMR:Q6A051 STRING:Q6A051
PhosphoSite:Q6A051 PaxDb:Q6A051 PRIDE:Q6A051
Ensembl:ENSMUST00000077282 GeneID:226255 KEGG:mmu:226255
UCSC:uc008iai.2 UCSC:uc008iaj.1 GeneTree:ENSGT00390000001118
HOGENOM:HOG000231727 InParanoid:Q6A051 NextBio:378084 Bgee:Q6A051
Genevestigator:Q6A051 Uniprot:Q6A051
Length = 1378
Score = 123 (48.4 bits), Expect = 0.00036, P = 0.00036
Identities = 31/93 (33%), Positives = 45/93 (48%)
Query: 202 CKCNGHASRCIKSPQGELVCE-CRHNTAGKDCEKCKPFFSDRPWGRATVYDANECKGGRC 260
C+CNGH S CI + VCE C++ T G+ C++C P + +G T + +C C
Sbjct: 1013 CQCNGH-STCINNN----VCEQCKNLTTGRQCQECMPGY----YGDPT--NGGQCTA--C 1059
Query: 261 KCNGHASRCIKSPQGALVCECRHNTAGKDCEKC 293
C GHA+ C G C + G C+ C
Sbjct: 1060 TCGGHANVC-HLHTGKCFCTTK-GIKGDQCQLC 1090
>UNIPROTKB|F1M3T8 [details] [associations]
symbol:Atrnl1 "Protein Atrnl1" species:10116 "Rattus
norvegicus" [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0030246 "carbohydrate binding" evidence=IEA] InterPro:IPR000742
InterPro:IPR001304 InterPro:IPR002165 InterPro:IPR015915
Pfam:PF01437 PROSITE:PS50026 PROSITE:PS50041 SMART:SM00034
SMART:SM00181 RGD:1563485 GO:GO:0016021 GO:GO:0030246
Gene3D:3.10.100.10 InterPro:IPR016186 InterPro:IPR016187
SUPFAM:SSF56436 GO:GO:0007186 InterPro:IPR013032 PROSITE:PS00022
Gene3D:2.120.10.80 InterPro:IPR002049 SMART:SM00180 PROSITE:PS01248
PROSITE:PS50027 Gene3D:2.60.120.290 InterPro:IPR000859 Pfam:PF00431
SMART:SM00042 SUPFAM:SSF49854 PROSITE:PS01180 InterPro:IPR013111
InterPro:IPR003659 Pfam:PF07974 SMART:SM00423
GeneTree:ENSGT00390000001118 IPI:IPI00358542
Ensembl:ENSRNOT00000023414 ArrayExpress:F1M3T8 Uniprot:F1M3T8
Length = 1199
Score = 121 (47.7 bits), Expect = 0.00051, P = 0.00051
Identities = 31/93 (33%), Positives = 44/93 (47%)
Query: 202 CKCNGHASRCIKSPQGELVCE-CRHNTAGKDCEKCKPFFSDRPWGRATVYDANECKGGRC 260
C+CNGH S CI + VCE C++ T G+ C+ C P + +G T + +C C
Sbjct: 995 CQCNGH-STCINNN----VCEQCKNLTTGRQCQDCMPGY----YGDPT--NGGQCTA--C 1041
Query: 261 KCNGHASRCIKSPQGALVCECRHNTAGKDCEKC 293
C GHA+ C G C + G C+ C
Sbjct: 1042 TCGGHANVC-HLHTGKCFCTTK-GIKGDQCQLC 1072
>UNIPROTKB|F1RGK2 [details] [associations]
symbol:MEGF8 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0005509 "calcium ion binding" evidence=IEA] InterPro:IPR000742
InterPro:IPR001881 InterPro:IPR002165 InterPro:IPR015915
InterPro:IPR018097 Pfam:PF01437 Pfam:PF07645 PROSITE:PS01187
PROSITE:PS50026 SMART:SM00179 SMART:SM00181 InterPro:IPR000152
GO:GO:0016021 GO:GO:0005509 InterPro:IPR013032 PROSITE:PS00022
Gene3D:2.120.10.80 PROSITE:PS01186 InterPro:IPR002049 Pfam:PF00053
SMART:SM00180 PROSITE:PS00010 PROSITE:PS01248 PROSITE:PS50027
Gene3D:2.60.120.290 InterPro:IPR000859 Pfam:PF00431 SMART:SM00042
SUPFAM:SSF49854 PROSITE:PS01180 InterPro:IPR003659 SMART:SM00423
GeneTree:ENSGT00390000001118 OMA:GHSMVFH EMBL:FP102452
Ensembl:ENSSSCT00000003355 Uniprot:F1RGK2
Length = 2789
Score = 129 (50.5 bits), Expect = 0.00063, Sum P(2) = 0.00063
Identities = 35/101 (34%), Positives = 50/101 (49%)
Query: 202 CKCNGHASRCIKSPQGELVC-ECRHNTAGKDCEKCKPFFSDRPWGRATVYDANECKGGRC 260
C CN H S C K G C EC+ T G+ CE+C+P +G AT + C+ C
Sbjct: 1163 CGCNFH-SHCRKRGPG--FCDECQDWTWGEHCERCRP----GSFGNAT--GSGGCRP--C 1211
Query: 261 KCNGHAS-RCIKSPQGALVCECRHNTAGKDCEKCKP-FFSD 299
+CNGH R + +C C+ +T G C+ C P ++ D
Sbjct: 1212 QCNGHGDPRRGHCDNLSGLCFCQDHTEGAHCQLCSPGYYGD 1252
Score = 43 (20.2 bits), Expect = 0.00063, Sum P(2) = 0.00063
Identities = 6/16 (37%), Positives = 9/16 (56%)
Query: 56 CGLESPERYCDTSGAC 71
C L+ + YC + G C
Sbjct: 169 CSLQECQAYCGSHGTC 184
>FB|FBgn0031981 [details] [associations]
symbol:CG7466 species:7227 "Drosophila melanogaster"
[GO:0016020 "membrane" evidence=IEA] [GO:0005509 "calcium ion
binding" evidence=IEA] InterPro:IPR000742 InterPro:IPR001881
InterPro:IPR002165 InterPro:IPR015915 InterPro:IPR018097
Pfam:PF01437 Pfam:PF07645 PROSITE:PS01187 PROSITE:PS50026
SMART:SM00179 SMART:SM00181 InterPro:IPR000152 GO:GO:0016021
EMBL:AE014134 GO:GO:0005509 InterPro:IPR013032 PROSITE:PS00022
Gene3D:2.120.10.80 PROSITE:PS01186 InterPro:IPR002049 Pfam:PF00053
SMART:SM00180 PROSITE:PS00010 PROSITE:PS01248 PROSITE:PS50027
Gene3D:2.60.120.290 InterPro:IPR000859 Pfam:PF00431 SMART:SM00042
SUPFAM:SSF49854 PROSITE:PS01180 InterPro:IPR003659 SMART:SM00423
GeneTree:ENSGT00390000001118 InterPro:IPR009030 SUPFAM:SSF57184
HSSP:P35555 Pfam:PF12661 InterPro:IPR011043 SUPFAM:SSF50965
OMA:GHSMVFH FlyBase:FBgn0031981 RefSeq:NP_609180.2 UniGene:Dm.2153
ProteinModelPortal:Q9VLT6 SMR:Q9VLT6 MINT:MINT-1329221
EnsemblMetazoa:FBtr0079541 GeneID:34099 KEGG:dme:Dmel_CG7466
UCSC:CG7466-RA InParanoid:Q9VLT6 PhylomeDB:Q9VLT6 GenomeRNAi:34099
NextBio:786863 ArrayExpress:Q9VLT6 Bgee:Q9VLT6 Uniprot:Q9VLT6
Length = 2898
Score = 127 (49.8 bits), Expect = 0.00071, Sum P(3) = 0.00071
Identities = 25/70 (35%), Positives = 39/70 (55%)
Query: 201 RCKCNGHASRCIKSPQGELVCECRHNTAGKDCEKCKPFFSDRPWGRATVYDANECKGGRC 260
+C CNGH S C S + ++ +C +NT G+ CEKC+P F P R + + C+
Sbjct: 2304 QCLCNGH-SNCESSSRLDICLKCHNNTMGEQCEKCQPLFVGNP--R----EGHACQPCLD 2356
Query: 261 KCNGHASRCI 270
C+GH+ C+
Sbjct: 2357 YCHGHSDVCV 2366
Score = 123 (48.4 bits), Expect = 0.00076, Sum P(2) = 0.00076
Identities = 38/115 (33%), Positives = 53/115 (46%)
Query: 199 GGRCKCNGHASRCIKSPQGELVCE-CRHNTAGKDCEKCKPFFSDRPWGRATVYDANECKG 257
G C CN H S C G+ C+ C+ + G+ CE+C+ +G AT + C
Sbjct: 1261 GLSCGCNNH-STC-NERLGK--CDQCQDWSEGEKCERCR----QGSYGNATA--PHGCLP 1310
Query: 258 GRCKCNGHASR----CIKSPQGALVCECRHNTAGKDCEKCKPFFSDRPWGRATVY 308
C+CNGH ++ C S G C C+ NT G +CE C P + P G Y
Sbjct: 1311 --CECNGHGNQDLGVCNVS-NGE--CYCKDNTQGLNCELCAPGYYGDPRGGGKCY 1360
Score = 49 (22.3 bits), Expect = 0.00071, Sum P(3) = 0.00071
Identities = 15/58 (25%), Positives = 24/58 (41%)
Query: 28 CYENGRPRRCIPDFVNAAFGQEVKVNSVCGLESPE--RYCDTSGACHVCDA-GSPRGR 82
C N C D ++ +G+ + N L++ C + G CH C GS G+
Sbjct: 668 CLSNPECGWCSAD--SSCYGRTIGANCTTNLQTTRCPGICPSLGDCHSCLVHGSQWGK 723
Score = 39 (18.8 bits), Expect = 0.00071, Sum P(3) = 0.00071
Identities = 9/24 (37%), Positives = 13/24 (54%)
Query: 154 DFGKSWQPLQFYSSQCKKLYGRTA 177
D G+ WQ L ++ LYG T+
Sbjct: 1748 DTGR-WQQLAAVGARMPVLYGHTS 1770
>UNIPROTKB|Q9H1U4 [details] [associations]
symbol:MEGF9 "Multiple epidermal growth factor-like domains
protein 9" species:9606 "Homo sapiens" [GO:0016021 "integral to
membrane" evidence=IEA] [GO:0005509 "calcium ion binding"
evidence=NAS] [GO:0008150 "biological_process" evidence=ND]
[GO:0005575 "cellular_component" evidence=ND] InterPro:IPR001368
SMART:SM00208 GO:GO:0016021 EMBL:CH471090 GO:GO:0005509
InterPro:IPR013032 PROSITE:PS00022 PROSITE:PS01186
InterPro:IPR002049 Pfam:PF00053 SMART:SM00180 PROSITE:PS01248
PROSITE:PS50027 EMBL:AL138836 EMBL:AK295380 EMBL:AY358370
EMBL:AB011542 IPI:IPI00401283 RefSeq:NP_001073966.2
UniGene:Hs.741238 ProteinModelPortal:Q9H1U4 SMR:Q9H1U4
STRING:Q9H1U4 PhosphoSite:Q9H1U4 DMDM:116242627 PaxDb:Q9H1U4
PRIDE:Q9H1U4 DNASU:1955 Ensembl:ENST00000373930 GeneID:1955
KEGG:hsa:1955 UCSC:uc022bms.1 CTD:1955 GeneCards:GC09M123363
HGNC:HGNC:3234 HPA:HPA014319 MIM:604268 neXtProt:NX_Q9H1U4
eggNOG:NOG302694 HOGENOM:HOG000234343 HOVERGEN:HBG080442
InParanoid:Q9H1U4 OrthoDB:EOG43R3MN PhylomeDB:Q9H1U4
GenomeRNAi:1955 NextBio:7923 ArrayExpress:Q9H1U4 Bgee:Q9H1U4
CleanEx:HS_MEGF9 Genevestigator:Q9H1U4 GermOnline:ENSG00000106780
Uniprot:Q9H1U4
Length = 602
Score = 114 (45.2 bits), Expect = 0.00072, Sum P(2) = 0.00072
Identities = 29/101 (28%), Positives = 48/101 (47%)
Query: 202 CKCNGHASRCIK-SPQGELVCECRHNTAGKDCEKCKPFFSDRPWGRATVYDANECKGGRC 260
C C+ H + I + G+ C+C+ G C++C+ D +G + N C C
Sbjct: 254 CDCSPHGALSIPCNSSGK--CQCKVGVIGSICDRCQ----DGYYG----FSKNGCLP--C 301
Query: 261 KCNGHASRCIKSPQGALVCECRHNTAGKDCEKCKPFFSDRP 301
+CN ++ C + GA + C+ N+ G CE+CK F P
Sbjct: 302 QCNNRSASC-DALTGACL-NCQENSKGNHCEECKEGFYQSP 340
Score = 44 (20.5 bits), Expect = 0.00072, Sum P(2) = 0.00072
Identities = 9/15 (60%), Positives = 9/15 (60%)
Query: 67 TSGACHVCDAGSPRG 81
TSG C CD SP G
Sbjct: 247 TSGLCQPCDC-SPHG 260
>UNIPROTKB|F1M2P5 [details] [associations]
symbol:Atrnl1 "Protein Atrnl1" species:10116 "Rattus
norvegicus" [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0030246 "carbohydrate binding" evidence=IEA] InterPro:IPR000742
InterPro:IPR001304 InterPro:IPR002165 InterPro:IPR015915
Pfam:PF01437 PROSITE:PS50026 PROSITE:PS50041 SMART:SM00034
SMART:SM00181 RGD:1563485 GO:GO:0016021 GO:GO:0030246
Gene3D:3.10.100.10 InterPro:IPR016186 InterPro:IPR016187
SUPFAM:SSF56436 InterPro:IPR013032 PROSITE:PS00022
Gene3D:2.120.10.80 Gene3D:2.130.10.80 InterPro:IPR015916
InterPro:IPR002049 SMART:SM00180 PROSITE:PS01248 PROSITE:PS50027
Gene3D:2.60.120.290 InterPro:IPR000859 Pfam:PF00431 SMART:SM00042
SUPFAM:SSF49854 PROSITE:PS01180 InterPro:IPR013111
InterPro:IPR003659 Pfam:PF07974 SMART:SM00423
GeneTree:ENSGT00390000001118 IPI:IPI00949489
Ensembl:ENSRNOT00000067127 ArrayExpress:F1M2P5 Uniprot:F1M2P5
Length = 1076
Score = 119 (46.9 bits), Expect = 0.00075, P = 0.00075
Identities = 32/97 (32%), Positives = 45/97 (46%)
Query: 202 CKCNGHASRCIKSPQGELVCE-CRHNTAGKDCEKCKPFFSDRPWGRATVYDANECKGGRC 260
C+CNGH S CI + VCE C++ T G+ C+ C P + +G T + +C C
Sbjct: 995 CQCNGH-STCINNN----VCEQCKNLTTGRQCQDCMPGY----YGDPT--NGGQCTA--C 1041
Query: 261 KCNGHASRCIKSPQGALVCECRHNTAGKDCEKCKPFF 297
C GHA+ C G C + G C+ FF
Sbjct: 1042 TCGGHANVC-HLHTGKCFCTTK-GIKGDQCQLYYQFF 1076
>UNIPROTKB|I3LUK3 [details] [associations]
symbol:ATRNL1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0007186 "G-protein coupled receptor signaling pathway"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0030246 "carbohydrate binding" evidence=IEA] InterPro:IPR000742
InterPro:IPR001304 InterPro:IPR002165 InterPro:IPR015915
Pfam:PF01437 PROSITE:PS50026 PROSITE:PS50041 SMART:SM00034
SMART:SM00181 GO:GO:0016021 GO:GO:0030246 Gene3D:3.10.100.10
InterPro:IPR016186 InterPro:IPR016187 SUPFAM:SSF56436 GO:GO:0007186
InterPro:IPR013032 PROSITE:PS00022 Gene3D:2.120.10.80
InterPro:IPR002049 SMART:SM00180 PROSITE:PS01248 PROSITE:PS50027
Gene3D:2.60.120.290 InterPro:IPR000859 Pfam:PF00431 SMART:SM00042
SUPFAM:SSF49854 PROSITE:PS01180 OMA:YTQQKVS InterPro:IPR003659
SMART:SM00423 GeneTree:ENSGT00390000001118 EMBL:CU468352
EMBL:CU915583 EMBL:FP476124 Ensembl:ENSSSCT00000032203
Uniprot:I3LUK3
Length = 1092
Score = 119 (46.9 bits), Expect = 0.00084, Sum P(2) = 0.00084
Identities = 31/91 (34%), Positives = 44/91 (48%)
Query: 202 CKCNGHASRCIKSPQGELVCE-CRHNTAGKDCEKCKPFFSDRPWGRATVYDANECKGGRC 260
C+CNGH S CI + VCE C++ T GK C+ C P + +G T + +C C
Sbjct: 1017 CQCNGH-STCINNN----VCEQCKNLTTGKQCQDCMPGY----YGDPT--NGGQCTA--C 1063
Query: 261 KCNGHASRCIKSPQGALVCECRHNTAGKDCE 291
C+GHA+ C G C + G C+
Sbjct: 1064 TCSGHANIC-HMHTGKCFCTTK-GIKGDQCQ 1092
Score = 44 (20.5 bits), Expect = 0.00084, Sum P(2) = 0.00084
Identities = 18/68 (26%), Positives = 24/68 (35%)
Query: 138 CPKSIKPDSLAIYKSQDFGKSWQPLQFYSSQCKKLYGRTATGVISRGNEQEALCTDRHKK 197
C SI S +Y D K W+ CK G G E+ +C D ++
Sbjct: 222 CTTSISVPS-QVYCECD--KYWKGEACDIPYCKANCGSPDHGYCDLTGEKLCVCNDSWQE 278
Query: 198 QGGRCKCN 205
G C N
Sbjct: 279 IGPDCSLN 286
>ZFIN|ZDB-GENE-040724-213 [details] [associations]
symbol:lama4 "laminin, alpha 4" species:7955 "Danio
rerio" [GO:0045995 "regulation of embryonic development"
evidence=IEA] [GO:0005606 "laminin-1 complex" evidence=IEA]
[GO:0030155 "regulation of cell adhesion" evidence=IEA] [GO:0005102
"receptor binding" evidence=IEA] [GO:0007155 "cell adhesion"
evidence=IEA] [GO:0030334 "regulation of cell migration"
evidence=IEA] [GO:0005604 "basement membrane" evidence=IEA]
[GO:0048514 "blood vessel morphogenesis" evidence=IGI] [GO:0030903
"notochord development" evidence=IGI] [GO:0016203 "muscle
attachment" evidence=IGI;IMP] InterPro:IPR009254 InterPro:IPR010307
Pfam:PF06008 Pfam:PF06009 ZFIN:ZDB-GENE-040724-213 GO:GO:0030155
GO:GO:0048514 GO:GO:0007155 Gene3D:2.60.120.200 InterPro:IPR008985
InterPro:IPR013320 SUPFAM:SSF49899 GO:GO:0030334 GO:GO:0016203
InterPro:IPR002049 InterPro:IPR001791 Pfam:PF00053 SMART:SM00180
SMART:SM00282 PROSITE:PS01248 PROSITE:PS50027 PROSITE:PS50025
Pfam:PF02210 GO:GO:0045995 GO:GO:0030903 GO:GO:0005606 CTD:3910
HOVERGEN:HBG052299 KO:K06241 EMBL:AY862414 IPI:IPI00862172
RefSeq:NP_001034154.1 UniGene:Dr.87613 ProteinModelPortal:Q2TJF5
STRING:Q2TJF5 GeneID:566796 KEGG:dre:566796 NextBio:20888381
Uniprot:Q2TJF5
Length = 1871
Score = 121 (47.7 bits), Expect = 0.00085, P = 0.00085
Identities = 37/116 (31%), Positives = 55/116 (47%)
Query: 205 NGHASRCIKSPQGELV-CECRHNTAGKDCEKCKPFFSDRPWGRATVYDANECKGGRCKCN 263
N A+ C + +GE + C C+ AG CE+C P + P N CK +C CN
Sbjct: 108 NNFAAHCDR--RGEFLRCVCQDGYAGHYCERCAPGYYGNPMELG-----NSCK--KCDCN 158
Query: 264 GHASRCIKSPQGALV---C-ECRHNTAGKDCEKCKPFFSDRPWGRA-TVYDANECK 314
G++ + + V C C +TAG +CE+C P F +G A + D EC+
Sbjct: 159 GNSDPNLIFNECHNVTGKCLNCWGDTAGDNCERCAPGF----YGDAISAKDCQECQ 210
>ZFIN|ZDB-GENE-090730-1 [details] [associations]
symbol:megf8 "multiple EGF-like-domains 8"
species:7955 "Danio rerio" [GO:0005509 "calcium ion binding"
evidence=IEA] [GO:0005525 "GTP binding" evidence=IEA] [GO:0007264
"small GTPase mediated signal transduction" evidence=IEA]
[GO:0015031 "protein transport" evidence=IEA] [GO:0016020
"membrane" evidence=IEA] [GO:0061371 "determination of heart
left/right asymmetry" evidence=IMP] [GO:0071907 "determination of
digestive tract left/right asymmetry" evidence=IMP] [GO:0007368
"determination of left/right symmetry" evidence=IMP] [GO:1900164
"nodal signaling pathway involved in determination of lateral
mesoderm left/right asymmetry" evidence=IMP] [GO:0042074 "cell
migration involved in gastrulation" evidence=IMP] [GO:0055113
"epiboly involved in gastrulation with mouth forming second"
evidence=IMP] [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0016021 "integral to membrane" evidence=IEA] InterPro:IPR000742
InterPro:IPR001881 InterPro:IPR006652 InterPro:IPR015915
InterPro:IPR018097 Pfam:PF01344 PROSITE:PS01187 PROSITE:PS50026
SMART:SM00179 SMART:SM00181 InterPro:IPR000152
ZFIN:ZDB-GENE-090730-1 GO:GO:0005509 InterPro:IPR013032
PROSITE:PS00022 Gene3D:2.120.10.80 GO:GO:0007368 PROSITE:PS01186
InterPro:IPR002049 Pfam:PF00053 SMART:SM00180 PROSITE:PS00010
PROSITE:PS01248 PROSITE:PS50027 GO:GO:0042074 GO:GO:0055113
Gene3D:2.60.120.290 InterPro:IPR000859 Pfam:PF00431 SMART:SM00042
SUPFAM:SSF49854 PROSITE:PS01180 InterPro:IPR003659 SMART:SM00423
GeneTree:ENSGT00390000001118 InterPro:IPR024731 Pfam:PF12947
EMBL:BX571757 EMBL:BX571761 IPI:IPI00933480
Ensembl:ENSDART00000110951 Uniprot:F1R219
Length = 2774
Score = 123 (48.4 bits), Expect = 0.00088, Sum P(2) = 0.00088
Identities = 37/116 (31%), Positives = 49/116 (42%)
Query: 202 CKCNGHASRCIKSPQGELVCECRHNTAGKDCEKCKPFFSDRPWGRATVYDANECKGGRCK 261
C CN H S CI +P C+ T G CE CKP +G A + C C+
Sbjct: 1148 CGCNFH-STCITAPGICDQCQGLDWTTGPHCEHCKP----GSFGSALAR-GDGCVP--CQ 1199
Query: 262 CNGHASRC---IKSPQGALVCECRHNTAGKDCEKCKPFFSDRPWGRATVYDANECK 314
CNGH + G C C H+T G CE C P + P T + ++C+
Sbjct: 1200 CNGHGDPLQGFCHNQTGQ--CYCTHHTQGPHCESCLPGYYGDPRDNGTCF--SQCQ 1251
Score = 48 (22.0 bits), Expect = 0.00088, Sum P(2) = 0.00088
Identities = 12/52 (23%), Positives = 25/52 (48%)
Query: 16 VCGEKIDLNSDPCYE-NGRPRRCIPDFVNAAFGQEVKVNSVCGLESPERYCD 66
+C + D+N PC + G R + + ++ +E + + C + P YC+
Sbjct: 856 LCFLRSDINQQPCIDPQGEERHLLLNPLHCTLCEEYRDCAAC-TQDP--YCE 904
>UNIPROTKB|Q7Z7M0 [details] [associations]
symbol:MEGF8 "Multiple epidermal growth factor-like domains
protein 8" species:9606 "Homo sapiens" [GO:0016021 "integral to
membrane" evidence=IEA] [GO:0005509 "calcium ion binding"
evidence=NAS] [GO:0005198 "structural molecule activity"
evidence=NAS] [GO:0008150 "biological_process" evidence=ND]
[GO:0005575 "cellular_component" evidence=ND] [GO:0005515 "protein
binding" evidence=IPI] InterPro:IPR000742 InterPro:IPR001881
InterPro:IPR002165 InterPro:IPR015915 InterPro:IPR018097
Pfam:PF01437 Pfam:PF07645 PROSITE:PS01187 PROSITE:PS50026
SMART:SM00179 SMART:SM00181 InterPro:IPR000152 GO:GO:0016021
GO:GO:0005198 GO:GO:0005509 InterPro:IPR013032 PROSITE:PS00022
Gene3D:2.120.10.80 PROSITE:PS01186 InterPro:IPR002049 Pfam:PF00053
SMART:SM00180 PROSITE:PS00010 PROSITE:PS01248 PROSITE:PS50027
Gene3D:2.60.120.290 InterPro:IPR000859 Pfam:PF00431 SMART:SM00042
SUPFAM:SSF49854 PROSITE:PS01180 InterPro:IPR003659 SMART:SM00423
InterPro:IPR011043 SUPFAM:SSF50965 EMBL:AB011541 EMBL:AC011497
EMBL:AC024078 EMBL:BC153880 EMBL:AY280362 IPI:IPI00027310
IPI:IPI00607580 PIR:T00209 RefSeq:NP_001258867.1 RefSeq:NP_001401.2
UniGene:Hs.132483 ProteinModelPortal:Q7Z7M0 SMR:Q7Z7M0
IntAct:Q7Z7M0 MINT:MINT-2808456 STRING:Q7Z7M0 PhosphoSite:Q7Z7M0
DMDM:218511690 PaxDb:Q7Z7M0 PRIDE:Q7Z7M0 Ensembl:ENST00000251268
Ensembl:ENST00000334370 GeneID:1954 KEGG:hsa:1954 UCSC:uc002otl.4
UCSC:uc002otm.4 CTD:1954 GeneCards:GC19P042829 HGNC:HGNC:3233
HPA:HPA049248 MIM:604267 neXtProt:NX_Q7Z7M0 PharmGKB:PA27666
eggNOG:NOG304142 HOGENOM:HOG000113554 HOVERGEN:HBG108128
OMA:GHSMVFH ChiTaRS:MEGF8 GenomeRNAi:1954 NextBio:7919
ArrayExpress:Q7Z7M0 Bgee:Q7Z7M0 CleanEx:HS_MEGF8
Genevestigator:Q7Z7M0 GermOnline:ENSG00000105429 Uniprot:Q7Z7M0
Length = 2845
Score = 124 (48.7 bits), Expect = 0.00090, Sum P(2) = 0.00090
Identities = 34/101 (33%), Positives = 50/101 (49%)
Query: 202 CKCNGHASRCIKSPQGELVC-ECRHNTAGKDCEKCKPFFSDRPWGRATVYDANECKGGRC 260
C C+ H S C K G C EC+ T G+ CE+C+P +G AT + C+ C
Sbjct: 1163 CGCSFH-SHCRKRGPG--FCDECQDWTWGEHCERCRP----GSFGNAT--GSRGCRP--C 1211
Query: 261 KCNGHAS-RCIKSPQGALVCECRHNTAGKDCEKCKP-FFSD 299
+CNGH R + +C C+ +T G C+ C P ++ D
Sbjct: 1212 QCNGHGDPRRGHCDNLSGLCFCQDHTEGAHCQLCSPGYYGD 1252
Score = 47 (21.6 bits), Expect = 0.00090, Sum P(2) = 0.00090
Identities = 7/16 (43%), Positives = 9/16 (56%)
Query: 56 CGLESPERYCDTSGAC 71
CGL+ YC + G C
Sbjct: 169 CGLQECSAYCGSHGTC 184
>UNIPROTKB|E1BPS6 [details] [associations]
symbol:MEGF8 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005509 "calcium ion binding" evidence=IEA]
InterPro:IPR000742 InterPro:IPR001881 InterPro:IPR015915
InterPro:IPR018097 Pfam:PF07645 PROSITE:PS01187 PROSITE:PS50026
SMART:SM00179 SMART:SM00181 InterPro:IPR000152 GO:GO:0005509
InterPro:IPR013032 PROSITE:PS00022 Gene3D:2.120.10.80
PROSITE:PS01186 InterPro:IPR002049 Pfam:PF00053 SMART:SM00180
PROSITE:PS00010 PROSITE:PS01248 PROSITE:PS50027 Gene3D:2.60.120.290
InterPro:IPR000859 Pfam:PF00431 SMART:SM00042 SUPFAM:SSF49854
PROSITE:PS01180 InterPro:IPR003659 SMART:SM00423
GeneTree:ENSGT00390000001118 OMA:GHSMVFH EMBL:DAAA02047205
EMBL:DAAA02047206 EMBL:DAAA02047207 EMBL:DAAA02047208
EMBL:DAAA02047209 EMBL:DAAA02047210 IPI:IPI00999849
Ensembl:ENSBTAT00000043858 Uniprot:E1BPS6
Length = 2772
Score = 129 (50.5 bits), Expect = 0.00099, Sum P(2) = 0.00099
Identities = 35/101 (34%), Positives = 50/101 (49%)
Query: 202 CKCNGHASRCIKSPQGELVC-ECRHNTAGKDCEKCKPFFSDRPWGRATVYDANECKGGRC 260
C CN H S C K G C EC+ T G+ CE+C+P +G AT + C+ C
Sbjct: 1146 CGCNFH-SHCHKRGPG--FCDECQDWTWGEHCERCRP----GSFGNAT--GSGGCRP--C 1194
Query: 261 KCNGHAS-RCIKSPQGALVCECRHNTAGKDCEKCKP-FFSD 299
+CNGH R + +C C+ +T G C+ C P ++ D
Sbjct: 1195 QCNGHGDPRRGHCDNLSGLCFCQDHTEGAHCQLCSPGYYGD 1235
Score = 41 (19.5 bits), Expect = 0.00099, Sum P(2) = 0.00099
Identities = 6/16 (37%), Positives = 8/16 (50%)
Query: 56 CGLESPERYCDTSGAC 71
C L+ YC + G C
Sbjct: 169 CSLQECSAYCGSHGTC 184
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.320 0.135 0.451 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 314 314 0.00081 116 3 11 22 0.39 34
33 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 196
No. of states in DFA: 612 (65 KB)
Total size of DFA: 258 KB (2133 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:01
No. of threads or processors used: 24
Search cpu time: 25.99u 0.10s 26.09t Elapsed: 00:00:08
Total cpu time: 26.11u 0.10s 26.21t Elapsed: 00:00:10
Start: Thu Aug 15 13:05:55 2013 End: Thu Aug 15 13:06:05 2013
WARNINGS ISSUED: 1