Your job contains 1 sequence.
>psy6779
MVYMKSRKQREKKGWLMLEGKRILIDALKANLKLKMVFFSQWDILKELPLPEDVPQHRVD
YKNIQLWSDLVTPPGIIGIFELPAHPIASIDPASLPLNIVCDNIRDPGNMGSILRVCAAV
GARQVVCSRGCVDIYDNKVIRAAA
The BLAST search returned 1 gene product which did not match your query constraints. Please see the full BLAST report below for the details.
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= psy6779
(144 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
UNIPROTKB|Q9HC36 - symbol:RNMTL1 "RNA methyltransferase-l... 339 8.8e-31 1
MGI|MGI:1914640 - symbol:Rnmtl1 "RNA methyltransferase li... 334 3.0e-30 1
UNIPROTKB|E2QXE5 - symbol:RNMTL1 "Uncharacterized protein... 333 3.8e-30 1
UNIPROTKB|F1RHK0 - symbol:RNMTL1 "Uncharacterized protein... 332 4.9e-30 1
UNIPROTKB|E1BBM0 - symbol:RNMTL1 "Uncharacterized protein... 329 1.0e-29 1
UNIPROTKB|F1NG21 - symbol:RNMTL1 "Uncharacterized protein... 312 6.4e-28 1
ZFIN|ZDB-GENE-050417-184 - symbol:rnmtl1a "RNA methyltran... 310 1.0e-27 1
UNIPROTKB|I3L443 - symbol:RNMTL1 "RNA methyltransferase-l... 299 1.5e-26 1
FB|FBgn0036889 - symbol:CG14100 species:7227 "Drosophila ... 264 1.1e-22 1
ZFIN|ZDB-GENE-030131-158 - symbol:rnmtl1b "RNA methyltran... 260 6.0e-22 1
TIGR_CMR|BA_4805 - symbol:BA_4805 "RNA methyltransferase,... 196 1.3e-15 1
RGD|2321877 - symbol:LOC100360580 "RNA methyltransferase ... 183 3.0e-14 1
UNIPROTKB|P94978 - symbol:tsnR "TrmH family RNA methyltra... 163 4.6e-12 1
UNIPROTKB|Q3ABT2 - symbol:CHY_1573 "RNA methyltransferase... 154 5.2e-11 1
TIGR_CMR|CHY_1573 - symbol:CHY_1573 "RNA methyltransferas... 154 5.2e-11 1
UNIPROTKB|Q9KTT5 - symbol:VC_0803 "RNA methyltransferase,... 131 2.3e-08 1
TIGR_CMR|VC_0803 - symbol:VC_0803 "RNA methyltransferase,... 131 2.3e-08 1
UNIPROTKB|Q9F5K6 - symbol:aviRb "23S rRNA (uridine(2479)-... 118 8.8e-07 1
>UNIPROTKB|Q9HC36 [details] [associations]
symbol:RNMTL1 "RNA methyltransferase-like protein 1"
species:9606 "Homo sapiens" [GO:0003723 "RNA binding" evidence=IEA]
[GO:0006396 "RNA processing" evidence=IEA] [GO:0008173 "RNA
methyltransferase activity" evidence=IEA] [GO:0005739
"mitochondrion" evidence=IEA] InterPro:IPR001537 InterPro:IPR013123
Pfam:PF00588 Pfam:PF08032 SMART:SM00967 GO:GO:0005739 EMBL:CH471108
GO:GO:0003723 GO:GO:0006396 GO:GO:0008173 GO:GO:0001510
eggNOG:COG0566 EMBL:AK001443 EMBL:AK222900 EMBL:AF177344
EMBL:BC011550 EMBL:BC050614 IPI:IPI00335589 RefSeq:NP_060616.1
UniGene:Hs.182729 ProteinModelPortal:Q9HC36 SMR:Q9HC36
IntAct:Q9HC36 STRING:Q9HC36 PhosphoSite:Q9HC36 DMDM:74734265
PaxDb:Q9HC36 PRIDE:Q9HC36 DNASU:55178 Ensembl:ENST00000304478
GeneID:55178 KEGG:hsa:55178 UCSC:uc002frw.3 CTD:55178
GeneCards:GC17P000685 HGNC:HGNC:18485 HPA:HPA022534 HPA:HPA023031
HPA:HPA023292 MIM:612600 neXtProt:NX_Q9HC36 PharmGKB:PA38341
HOGENOM:HOG000154151 HOVERGEN:HBG108411 InParanoid:Q9HC36
OMA:RYDKAFP OrthoDB:EOG4PG619 PhylomeDB:Q9HC36 ChiTaRS:RNMTL1
GenomeRNAi:55178 NextBio:58983 Bgee:Q9HC36 CleanEx:HS_RNMTL1
Genevestigator:Q9HC36 Uniprot:Q9HC36
Length = 420
Score = 339 (124.4 bits), Expect = 8.8e-31, P = 8.8e-31
Identities = 72/149 (48%), Positives = 102/149 (68%)
Query: 1 MVYMKSRKQREKKGWLMLEGKRILIDALKANLKLKMVFFSQWDILKELPLPE--DVPQHR 58
M +KSR REK+G ++LEG+R++ DALKA KM FFS+ + LKELP+ + V +
Sbjct: 108 MTIVKSRPFREKQGKILLEGRRLISDALKAGAVPKMFFFSRLEYLKELPVDKLKGVSLIK 167
Query: 59 VDYKNIQLWSDLVTPPGIIGIFELPAH-----PIASIDPASLPLNIVCDNIRDPGNMGSI 113
V +++I+ WSDLVTP GI+GIF P H P + SLPL ++CDN+RDPGN+G+I
Sbjct: 168 VKFEDIKDWSDLVTPQGIMGIFAKPDHVKMTYPKTQLQH-SLPLLLICDNLRDPGNLGTI 226
Query: 114 LRVCAAVGARQVVCSRGCVDIYDNKVIRA 142
LR A G +V+ ++GCVD ++ KV+RA
Sbjct: 227 LRSAAGAGCSKVLLTKGCVDAWEPKVLRA 255
>MGI|MGI:1914640 [details] [associations]
symbol:Rnmtl1 "RNA methyltransferase like 1" species:10090
"Mus musculus" [GO:0003674 "molecular_function" evidence=ND]
[GO:0003723 "RNA binding" evidence=IEA] [GO:0005739 "mitochondrion"
evidence=IDA] [GO:0006396 "RNA processing" evidence=IEA]
[GO:0008150 "biological_process" evidence=ND] [GO:0008168
"methyltransferase activity" evidence=IEA] [GO:0008173 "RNA
methyltransferase activity" evidence=IEA] [GO:0016740 "transferase
activity" evidence=IEA] [GO:0032259 "methylation" evidence=IEA]
InterPro:IPR001537 InterPro:IPR013123 Pfam:PF00588 Pfam:PF08032
SMART:SM00967 MGI:MGI:1914640 GO:GO:0005739 GO:GO:0003723
GO:GO:0006396 GO:GO:0008173 GO:GO:0001510 EMBL:AL591129
eggNOG:COG0566 GeneTree:ENSGT00390000017317 CTD:55178
HOGENOM:HOG000154151 HOVERGEN:HBG108411 OMA:RYDKAFP
OrthoDB:EOG4PG619 EMBL:AK014739 EMBL:AK147805 EMBL:BC038288
EMBL:BC090975 EMBL:BC115622 EMBL:BC115623 IPI:IPI00344090
RefSeq:NP_899086.2 UniGene:Mm.24886 ProteinModelPortal:Q5ND52
SMR:Q5ND52 STRING:Q5ND52 PhosphoSite:Q5ND52 PRIDE:Q5ND52
Ensembl:ENSMUST00000040577 GeneID:67390 KEGG:mmu:67390
UCSC:uc007kfn.2 InParanoid:Q5ND52 NextBio:324432 Bgee:Q5ND52
CleanEx:MM_RNMTL1 Genevestigator:Q5ND52 Uniprot:Q5ND52
Length = 418
Score = 334 (122.6 bits), Expect = 3.0e-30, P = 3.0e-30
Identities = 70/149 (46%), Positives = 102/149 (68%)
Query: 1 MVYMKSRKQREKKGWLMLEGKRILIDALKANLKLKMVFFSQWDILKELPLPE--DVPQHR 58
M +KSR REK+G ++LEG+R++ DALKA K FFS+ + +KELP+ + DV +
Sbjct: 108 MTIVKSRPFREKQGKILLEGRRLIADALKAGAVPKAFFFSRLEYVKELPVDKLKDVSLIK 167
Query: 59 VDYKNIQLWSDLVTPPGIIGIFELPAHPIASIDPAS-----LPLNIVCDNIRDPGNMGSI 113
V +++I+ WSDLVTP GI+GIF P P+ P + LPL ++CDN+RDPGN+G+I
Sbjct: 168 VKFEDIKDWSDLVTPQGIMGIFAKP-DPVKMTYPETPLHHTLPLVLICDNLRDPGNLGTI 226
Query: 114 LRVCAAVGARQVVCSRGCVDIYDNKVIRA 142
LR A G +V+ ++GCVD ++ KV+RA
Sbjct: 227 LRSAAGAGCSKVLLTKGCVDAWEPKVLRA 255
>UNIPROTKB|E2QXE5 [details] [associations]
symbol:RNMTL1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005739 "mitochondrion" evidence=IEA]
[GO:0008173 "RNA methyltransferase activity" evidence=IEA]
[GO:0006396 "RNA processing" evidence=IEA] [GO:0003723 "RNA
binding" evidence=IEA] InterPro:IPR001537 InterPro:IPR013123
Pfam:PF00588 Pfam:PF08032 SMART:SM00967 GO:GO:0005739 GO:GO:0003723
GO:GO:0006396 GO:GO:0008173 GO:GO:0001510
GeneTree:ENSGT00390000017317 CTD:55178 OMA:RYDKAFP
EMBL:AAEX03006687 RefSeq:XP_853914.1 Ensembl:ENSCAFT00000030363
GeneID:611179 KEGG:cfa:611179 Uniprot:E2QXE5
Length = 423
Score = 333 (122.3 bits), Expect = 3.8e-30, P = 3.8e-30
Identities = 70/150 (46%), Positives = 103/150 (68%)
Query: 1 MVYMKSRKQREKKGWLMLEGKRILIDALKANLKLKMVFFSQWDILKELPLPE--DVPQHR 58
M +KSR REK+G ++LEG+R++ DALKA K+ FFS+ + +KELP+ + V +
Sbjct: 108 MTIVKSRPFREKQGKILLEGRRLIADALKAGAVPKVFFFSRLEYIKELPIDKLKGVSLIK 167
Query: 59 VDYKNIQLWSDLVTPPGIIGIFELPAHPIASIDPAS-----LPLNIVCDNIRDPGNMGSI 113
V +++I+ WSDLVTP GI+GIF P H + P + LPL ++CDN+RDPGN+G+I
Sbjct: 168 VKFEDIKDWSDLVTPQGIMGIFAKPDH-VKMTYPETQLRHLLPLLLICDNLRDPGNLGTI 226
Query: 114 LRVCAAVGARQVVCSRGCVDIYDNKVIRAA 143
LR A G +V+ ++GCVD ++ KV+RAA
Sbjct: 227 LRSAAGAGCSKVLLTKGCVDPWEPKVLRAA 256
>UNIPROTKB|F1RHK0 [details] [associations]
symbol:RNMTL1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005739 "mitochondrion" evidence=IEA] [GO:0008173 "RNA
methyltransferase activity" evidence=IEA] [GO:0006396 "RNA
processing" evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA]
InterPro:IPR001537 InterPro:IPR013123 Pfam:PF00588 Pfam:PF08032
SMART:SM00967 GO:GO:0005739 GO:GO:0003723 GO:GO:0006396
GO:GO:0008173 GO:GO:0001510 GeneTree:ENSGT00390000017317
OMA:RYDKAFP EMBL:CU928997 Ensembl:ENSSSCT00000019379 Uniprot:F1RHK0
Length = 424
Score = 332 (121.9 bits), Expect = 4.9e-30, P = 4.9e-30
Identities = 68/148 (45%), Positives = 101/148 (68%)
Query: 1 MVYMKSRKQREKKGWLMLEGKRILIDALKANLKLKMVFFSQWDILKELPLPE--DVPQHR 58
M +KSR REK+G ++LEG+R++ DALKA K+ FFS+ + +KELP+ + V +
Sbjct: 110 MTIVKSRPFREKQGKILLEGRRLIADALKAGAVPKIFFFSRLEYIKELPIEKLKGVSLIK 169
Query: 59 VDYKNIQLWSDLVTPPGIIGIFELPAHPIASIDPA----SLPLNIVCDNIRDPGNMGSIL 114
V +++I+ WSDLVTP GI+GIF P H + +LPL ++CDN+RDPGN+G+IL
Sbjct: 170 VKFEDIKDWSDLVTPQGIMGIFAKPDHAKMTYPETQLRHTLPLLLICDNLRDPGNLGTIL 229
Query: 115 RVCAAVGARQVVCSRGCVDIYDNKVIRA 142
R A G +V+ ++GCVD ++ KV+RA
Sbjct: 230 RSAAGAGCSRVLLTKGCVDAWEPKVLRA 257
>UNIPROTKB|E1BBM0 [details] [associations]
symbol:RNMTL1 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005739 "mitochondrion" evidence=IEA] [GO:0008173 "RNA
methyltransferase activity" evidence=IEA] [GO:0006396 "RNA
processing" evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA]
InterPro:IPR001537 InterPro:IPR013123 Pfam:PF00588 Pfam:PF08032
SMART:SM00967 GO:GO:0005739 GO:GO:0003723 GO:GO:0006396
GO:GO:0008173 GO:GO:0001510 GeneTree:ENSGT00390000017317
OMA:RYDKAFP EMBL:DAAA02048649 IPI:IPI01000980
Ensembl:ENSBTAT00000025502 Uniprot:E1BBM0
Length = 417
Score = 329 (120.9 bits), Expect = 1.0e-29, P = 1.0e-29
Identities = 66/148 (44%), Positives = 102/148 (68%)
Query: 1 MVYMKSRKQREKKGWLMLEGKRILIDALKANLKLKMVFFSQWDILKELPLPE--DVPQHR 58
M +KSR REK+G ++LEG+R++ DALKA ++ FFS+ + +KELP+ + V +
Sbjct: 110 MTIVKSRPFREKQGKILLEGRRLIADALKAGAVPQIFFFSRLEYIKELPIEKLKGVSLIK 169
Query: 59 VDYKNIQLWSDLVTPPGIIGIFELPAHPIASIDPA----SLPLNIVCDNIRDPGNMGSIL 114
V +++I+ WSDLVTP GI+GIF P H + +LP++++CDN+RDPGN+G+IL
Sbjct: 170 VKFEDIKDWSDLVTPQGIMGIFAKPDHVKMTYPETQLRHTLPISLICDNLRDPGNLGTIL 229
Query: 115 RVCAAVGARQVVCSRGCVDIYDNKVIRA 142
R A G +V+ ++GCVD ++ KV+RA
Sbjct: 230 RSAAGAGCSKVLLTKGCVDAWEPKVLRA 257
>UNIPROTKB|F1NG21 [details] [associations]
symbol:RNMTL1 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0003723 "RNA binding" evidence=IEA] [GO:0006396
"RNA processing" evidence=IEA] [GO:0008173 "RNA methyltransferase
activity" evidence=IEA] [GO:0005739 "mitochondrion" evidence=IEA]
InterPro:IPR001537 InterPro:IPR013123 Pfam:PF00588 Pfam:PF08032
SMART:SM00967 GO:GO:0005739 GO:GO:0003723 GO:GO:0006396
GO:GO:0008173 GO:GO:0001510 GeneTree:ENSGT00390000017317
OMA:RYDKAFP EMBL:AADN02025802 IPI:IPI00595089
Ensembl:ENSGALT00000007658 Uniprot:F1NG21
Length = 387
Score = 312 (114.9 bits), Expect = 6.4e-28, P = 6.4e-28
Identities = 64/140 (45%), Positives = 94/140 (67%)
Query: 5 KSRKQREKKGWLMLEGKRILIDALKANLKLKMVFFSQWDILKELP-LP-EDVPQHRVDYK 62
KSR R++ G ++LEG R++ DAL+A + +FFS + L+ELP P + RV ++
Sbjct: 71 KSRSFRDRHGKVLLEGLRLIRDALQAGAAPRALFFSTAEHLRELPPAPLKGARLVRVRFE 130
Query: 63 NIQLWSDLVTPPGIIGIFELPAHPIASIDPASLPLNIVCDNIRDPGNMGSILRVCAAVGA 122
+I+ WSD+V P G+IGIF P H S A LP+ ++CDNIRDPGN+G+ILR A G
Sbjct: 131 DIKCWSDVVAPQGMIGIFSKPDHAKMSYPTAQLPIVLICDNIRDPGNLGTILRSAAGAGC 190
Query: 123 RQVVCSRGCVDIYDNKVIRA 142
+V+ ++GCVD ++ KV+RA
Sbjct: 191 EKVLLTKGCVDPWEPKVLRA 210
>ZFIN|ZDB-GENE-050417-184 [details] [associations]
symbol:rnmtl1a "RNA methyltransferase like 1a"
species:7955 "Danio rerio" [GO:0006396 "RNA processing"
evidence=IEA] [GO:0008168 "methyltransferase activity"
evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA] [GO:0008173
"RNA methyltransferase activity" evidence=IEA] [GO:0005575
"cellular_component" evidence=ND] [GO:0016740 "transferase
activity" evidence=IEA] [GO:0032259 "methylation" evidence=IEA]
InterPro:IPR001537 InterPro:IPR013123 Pfam:PF00588 Pfam:PF08032
SMART:SM00967 ZFIN:ZDB-GENE-050417-184 GO:GO:0003723 GO:GO:0006396
GO:GO:0008173 GO:GO:0001510 GeneTree:ENSGT00390000017317
EMBL:AL954372 IPI:IPI00500332 Ensembl:ENSDART00000147900
Uniprot:F1R7U4
Length = 443
Score = 310 (114.2 bits), Expect = 1.0e-27, P = 1.0e-27
Identities = 65/145 (44%), Positives = 98/145 (67%)
Query: 5 KSRKQREKKGWLMLEGKRILIDALKANLKLKMVFFSQWDILKELPLP--EDVPQHRVDYK 62
+SR R+K+G ++LEG+R++ DAL A +M+FFS + L+ELPL + +V Y+
Sbjct: 140 RSRAFRDKEGKVLLEGRRLICDALSAGASPQMIFFSLLERLQELPLDKLQQAKLIKVKYE 199
Query: 63 NIQLWSDLVTPPGIIGIFELP-AHPIASIDPA---SLPLNIVCDNIRDPGNMGSILRVCA 118
+I++WSDLVTP G+I IF P A + A S+PL ++CDN+RD GN+G+ LR A
Sbjct: 200 DIKMWSDLVTPQGLIAIFSKPDASRLTFPKDARLQSVPLFLICDNVRDAGNLGTTLRCAA 259
Query: 119 AVGARQVVCSRGCVDIYDNKVIRAA 143
A G +V+ S+GCVD ++ KV+R+A
Sbjct: 260 AAGCDRVLLSKGCVDAWEPKVLRSA 284
>UNIPROTKB|I3L443 [details] [associations]
symbol:RNMTL1 "RNA methyltransferase-like protein 1"
species:9606 "Homo sapiens" [GO:0003723 "RNA binding" evidence=IEA]
[GO:0006396 "RNA processing" evidence=IEA] [GO:0008173 "RNA
methyltransferase activity" evidence=IEA] InterPro:IPR001537
InterPro:IPR013123 Pfam:PF00588 Pfam:PF08032 SMART:SM00967
GO:GO:0003723 GO:GO:0006396 GO:GO:0008173 GO:GO:0001510
EMBL:AC087392 HGNC:HGNC:18485 ChiTaRS:RNMTL1
Ensembl:ENST00000571157 Uniprot:I3L443
Length = 177
Score = 299 (110.3 bits), Expect = 1.5e-26, P = 1.5e-26
Identities = 65/137 (47%), Positives = 92/137 (67%)
Query: 1 MVYMKSRKQREKKGWLMLEGKRILIDALKANLKLKMVFFSQWDILKELPLPE--DVPQHR 58
M +KSR REK+G ++LEG+R++ DALKA KM FFS+ + LKELP+ + V +
Sbjct: 35 MTIVKSRPFREKQGKILLEGRRLISDALKAGAVPKMFFFSRLEYLKELPVDKLKGVSLIK 94
Query: 59 VDYKNIQLWSDLVTPPGIIGIFELPAH-----PIASIDPASLPLNIVCDNIRDPGNMGSI 113
V +++I+ WSDLVTP GI+GIF P H P + SLPL ++CDN+RDPGN+G+I
Sbjct: 95 VKFEDIKDWSDLVTPQGIMGIFAKPDHVKMTYPKTQLQH-SLPLLLICDNLRDPGNLGTI 153
Query: 114 LRVCAAVGARQVVCSRG 130
LR A G +V+ ++G
Sbjct: 154 LRSAAGAGCSKVLLTKG 170
>FB|FBgn0036889 [details] [associations]
symbol:CG14100 species:7227 "Drosophila melanogaster"
[GO:0006396 "RNA processing" evidence=IEA] [GO:0003723 "RNA
binding" evidence=IEA] [GO:0008173 "RNA methyltransferase activity"
evidence=IEA] [GO:0005875 "microtubule associated complex"
evidence=IDA] InterPro:IPR001537 InterPro:IPR013123 Pfam:PF00588
Pfam:PF08032 SMART:SM00967 GO:GO:0005875 EMBL:AE014296
GO:GO:0003723 GO:GO:0006396 GO:GO:0008173 GO:GO:0001510
eggNOG:COG0566 EMBL:AY071079 RefSeq:NP_649130.2 UniGene:Dm.6131
ProteinModelPortal:Q9VW14 SMR:Q9VW14 STRING:Q9VW14 PaxDb:Q9VW14
PRIDE:Q9VW14 EnsemblMetazoa:FBtr0074971 GeneID:40132
KEGG:dme:Dmel_CG14100 UCSC:CG14100-RA FlyBase:FBgn0036889
GeneTree:ENSGT00390000017317 InParanoid:Q9VW14 OMA:AVEHGWQ
OrthoDB:EOG4PNVZR PhylomeDB:Q9VW14 GenomeRNAi:40132 NextBio:817156
Bgee:Q9VW14 Uniprot:Q9VW14
Length = 407
Score = 264 (98.0 bits), Expect = 1.1e-22, P = 1.1e-22
Identities = 56/153 (36%), Positives = 95/153 (62%)
Query: 4 MKSRKQREKKGWLMLEGKRILIDALKANLKLKMVFFSQWDILKELPLPEDVPQ------- 56
++SRK+R+K +++EG+R++ +AL+ LK++++ FSQ D L + V Q
Sbjct: 128 VRSRKRRDKNRQIIVEGRRLIQEALQCGLKMEVLLFSQKDQLALVKEEVGVAQVETGTKI 187
Query: 57 HRVDYKNIQLWSDLVTPPGIIGIFELPAHP-----IAS---IDPASLPLNIVCDNIRDPG 108
++V +++ WS LVTPPG++ IF+ P+ +A + P+ +VCDNIR+P
Sbjct: 188 YKVPQHDLKTWSSLVTPPGLMAIFDRPSDKGLEKNLAEQQRLGSQPFPITVVCDNIREPN 247
Query: 109 NMGSILRVCAAVGARQVVCSRGCVDIYDNKVIR 141
N+GSI+R CAA+ QVV + GC D +++K +R
Sbjct: 248 NLGSIIRTCAALPCSQVVVTHGCCDPWESKALR 280
>ZFIN|ZDB-GENE-030131-158 [details] [associations]
symbol:rnmtl1b "RNA methyltransferase like 1b"
species:7955 "Danio rerio" [GO:0008168 "methyltransferase activity"
evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA] [GO:0008173
"RNA methyltransferase activity" evidence=IEA] [GO:0006396 "RNA
processing" evidence=IEA] [GO:0032259 "methylation" evidence=IEA]
[GO:0016740 "transferase activity" evidence=IEA] InterPro:IPR001537
InterPro:IPR013123 Pfam:PF00588 Pfam:PF08032 SMART:SM00967
ZFIN:ZDB-GENE-030131-158 GO:GO:0003723 GO:GO:0006396 GO:GO:0008173
GO:GO:0001510 GeneTree:ENSGT00390000017317 EMBL:CU928208
EMBL:FP003594 IPI:IPI00944363 RefSeq:NP_001157404.1
UniGene:Dr.78212 Ensembl:ENSDART00000100240 GeneID:792923
KEGG:dre:792923 CTD:792923 NextBio:20931242 Bgee:F1QYC8
Uniprot:F1QYC8
Length = 449
Score = 260 (96.6 bits), Expect = 6.0e-22, P = 6.0e-22
Identities = 58/144 (40%), Positives = 91/144 (63%)
Query: 6 SRKQREKKGWLMLEGKRILIDALKANLKLKMVFFSQWDILKELPLPE--DVPQHRVDYKN 63
S+K RE + ++LEGK ++ AL A + + ++FS D L+ELPL + +V ++
Sbjct: 136 SKKLREHQ--VVLEGKHLVCSALDAGAEAQTLYFSSVDALRELPLDKLRQTNVVKVKMED 193
Query: 64 IQLWSDLVTPPGIIGIFELP-AHPIASIDPA---SLPLNIVCDNIRDPGNMGSILRVCAA 119
Q+WS+L T II IF+ P A + + ++PL ++CD +RDPGN+GS+LR AA
Sbjct: 194 AQVWSELDTSQEIIAIFKRPEASRLTFSEEKYGRAVPLTLICDTVRDPGNLGSVLRSAAA 253
Query: 120 VGARQVVCSRGCVDIYDNKVIRAA 143
G V+ ++GCVDI++ KV+RAA
Sbjct: 254 AGCHSVLLTKGCVDIWELKVLRAA 277
>TIGR_CMR|BA_4805 [details] [associations]
symbol:BA_4805 "RNA methyltransferase, TrmH family"
species:198094 "Bacillus anthracis str. Ames" [GO:0008173 "RNA
methyltransferase activity" evidence=ISS] [GO:0009451 "RNA
modification" evidence=ISS] InterPro:IPR001537 InterPro:IPR013123
Pfam:PF00588 Pfam:PF08032 SMART:SM00967 EMBL:AE016879 EMBL:AE017334
EMBL:AE017225 GenomeReviews:AE016879_GR GenomeReviews:AE017225_GR
GenomeReviews:AE017334_GR GO:GO:0003723 GO:GO:0006396 GO:GO:0008173
GO:GO:0001510 HSSP:P39290 HOGENOM:HOG000218799 KO:K03437
OMA:AQGSHFH RefSeq:NP_847008.1 RefSeq:YP_021450.1
RefSeq:YP_030704.1 ProteinModelPortal:Q81L29 DNASU:1083938
EnsemblBacteria:EBBACT00000012902 EnsemblBacteria:EBBACT00000014455
EnsemblBacteria:EBBACT00000024420 GeneID:1083938 GeneID:2815769
GeneID:2851594 KEGG:ban:BA_4805 KEGG:bar:GBAA_4805 KEGG:bat:BAS4457
ProtClustDB:CLSK873510 BioCyc:BANT260799:GJAJ-4514-MONOMER
BioCyc:BANT261594:GJ7F-4667-MONOMER Uniprot:Q81L29
Length = 254
Score = 196 (74.1 bits), Expect = 1.3e-15, P = 1.3e-15
Identities = 44/139 (31%), Positives = 78/139 (56%)
Query: 4 MKSRKQREKKGWLMLEGKRILIDALKANLKLKMVFFSQWDILKELPLPEDVPQHRVDYKN 63
++++K+R+KKG +EG ++ +ALKA + +++ Q D+ K+ + DV + V
Sbjct: 18 LQTKKERDKKGLFFVEGFHLVEEALKAGVVTELIVSDQTDLPKDWTV-NDVEMYIVPEAI 76
Query: 64 IQLWSDLVTPPGIIGIFELPAHPIASIDPASLPLNIVCDNIRDPGNMGSILRVCAAVGAR 123
+++ + T G+ + E +A D L L D ++DPGN+G+I+R A G
Sbjct: 77 VKVLRETETTQGVFAVCEKHESEVALTDGKFLLL----DGLQDPGNLGTIIRTADAAGIH 132
Query: 124 QVVCSRGCVDIYDNKVIRA 142
VV GCVD Y++KV+R+
Sbjct: 133 AVVLGEGCVDAYNSKVLRS 151
>RGD|2321877 [details] [associations]
symbol:LOC100360580 "RNA methyltransferase like 1" species:10116
"Rattus norvegicus" [GO:0005739 "mitochondrion" evidence=IEA]
[GO:0008168 "methyltransferase activity" evidence=IEA]
InterPro:IPR013123 Pfam:PF08032 RGD:2321877 GO:GO:0005739
GO:GO:0008168 GO:GO:0032259 GeneTree:ENSGT00390000017317
OrthoDB:EOG4PG619 IPI:IPI00959155 Ensembl:ENSRNOT00000056278
Uniprot:D3ZQG0
Length = 187
Score = 183 (69.5 bits), Expect = 3.0e-14, P = 3.0e-14
Identities = 39/80 (48%), Positives = 57/80 (71%)
Query: 1 MVYMKSRKQREKKGWLMLEGKRILIDALKANLKLKMVFFSQWDILKELPLPE--DVPQHR 58
M +KSR REK+G ++LEG+R++ DALKA KM FFS+ + +KELP+ + V +
Sbjct: 108 MTIVKSRPFREKQGKILLEGRRLIADALKAGAVPKMFFFSRLEYIKELPVDKLKGVSLIK 167
Query: 59 VDYKNIQLWSDLVTPPGIIG 78
V +++I+ WSDLVTP GI+G
Sbjct: 168 VKFEDIKDWSDLVTPQGIMG 187
>UNIPROTKB|P94978 [details] [associations]
symbol:tsnR "TrmH family RNA methyltransferase"
species:83332 "Mycobacterium tuberculosis H37Rv" [GO:0005886
"plasma membrane" evidence=IDA] InterPro:IPR001537
InterPro:IPR013123 Pfam:PF00588 Pfam:PF08032 SMART:SM00967
GO:GO:0005886 GenomeReviews:AL123456_GR EMBL:BX842577 GO:GO:0003723
GO:GO:0006396 GO:GO:0008173 GO:GO:0001510 HOGENOM:HOG000218799
KO:K03437 EMBL:CP003248 PIR:G70619 RefSeq:NP_216160.1
RefSeq:YP_006515035.1 ProteinModelPortal:P94978 SMR:P94978
PRIDE:P94978 EnsemblBacteria:EBMYCT00000002199 GeneID:13316425
GeneID:885163 KEGG:mtu:Rv1644 KEGG:mtv:RVBD_1644 PATRIC:18152199
TubercuList:Rv1644 OMA:AQGSHFH ProtClustDB:CLSK791298
Uniprot:P94978
Length = 260
Score = 163 (62.4 bits), Expect = 4.6e-12, P = 4.6e-12
Identities = 43/136 (31%), Positives = 72/136 (52%)
Query: 10 REKKGWLMLEGKRILIDALKANLKLKMVFFSQWDILK-ELPLP-EDVPQHRVDYKNIQLW 67
R + G + EG ++ AL L ++ VF ++ + EL L + H V + +
Sbjct: 21 RRRAGRFLAEGPNLVAAALARGL-VREVFVTEVAARRHELLLAAHEASVHLVTERAAKAL 79
Query: 68 SDLVTPPGIIGIFELPAHPIASIDPASLPLNIVCDNIRDPGNMGSILRVCAAVGARQVVC 127
SD VTP G++ + +LPA + + S L V IR+PGN G+++R+ A+GA V+
Sbjct: 80 SDTVTPAGLVAVCDLPATRLEDVLAGSPQLIAVTVEIREPGNAGTVIRIADAMGAAAVIL 139
Query: 128 SRGCVDIYDNKVIRAA 143
+ VD Y+ K +RA+
Sbjct: 140 AGRSVDPYNGKCLRAS 155
>UNIPROTKB|Q3ABT2 [details] [associations]
symbol:CHY_1573 "RNA methyltransferase, TrmH family
protein" species:246194 "Carboxydothermus hydrogenoformans Z-2901"
[GO:0008150 "biological_process" evidence=ND] InterPro:IPR001537
InterPro:IPR013123 Pfam:PF00588 Pfam:PF08032 SMART:SM00967
EMBL:CP000141 GenomeReviews:CP000141_GR GO:GO:0003723 GO:GO:0006396
GO:GO:0008173 GO:GO:0001510 eggNOG:COG0566 HOGENOM:HOG000218799
KO:K03437 RefSeq:YP_360402.1 ProteinModelPortal:Q3ABT2
STRING:Q3ABT2 GeneID:3726319 KEGG:chy:CHY_1573 PATRIC:21276271
OMA:SSHARHA BioCyc:CHYD246194:GJCN-1572-MONOMER Uniprot:Q3ABT2
Length = 258
Score = 154 (59.3 bits), Expect = 5.2e-11, P = 5.2e-11
Identities = 48/142 (33%), Positives = 76/142 (53%)
Query: 10 REKKGWLMLEGKRILIDALKANLKLKMVFFSQ--WDILKELPLPEDVPQHRVDYKNIQLW 67
R K G ++EG++++ + + N LK + S+ W K + +D ++ QL+
Sbjct: 26 RRKNGMFIVEGEKLVFELITDNWPLKYLVVSESYWQAKK---IDDDGV--KIVVLTDQLF 80
Query: 68 ---SDLVTPPGIIGI--FELPAHPIASIDPASLPLNIVCDNIRDPGNMGSILRVCAAVGA 122
S+LVTPPGI+ + + + P A D A L V D ++DPGN+G++LR G
Sbjct: 81 NKISELVTPPGILAVACMKSLSWP-AGKDGAFL----VLDGLQDPGNVGTLLRAAFGFGV 135
Query: 123 RQVVCSRGCVDIYDNKVIRAAA 144
V+ VDIY+ KVIRA+A
Sbjct: 136 SGVILLPPAVDIYNPKVIRASA 157
>TIGR_CMR|CHY_1573 [details] [associations]
symbol:CHY_1573 "RNA methyltransferase, TrmH family
protein" species:246194 "Carboxydothermus hydrogenoformans Z-2901"
[GO:0008150 "biological_process" evidence=ND] [GO:0008173 "RNA
methyltransferase activity" evidence=ISS] InterPro:IPR001537
InterPro:IPR013123 Pfam:PF00588 Pfam:PF08032 SMART:SM00967
EMBL:CP000141 GenomeReviews:CP000141_GR GO:GO:0003723 GO:GO:0006396
GO:GO:0008173 GO:GO:0001510 eggNOG:COG0566 HOGENOM:HOG000218799
KO:K03437 RefSeq:YP_360402.1 ProteinModelPortal:Q3ABT2
STRING:Q3ABT2 GeneID:3726319 KEGG:chy:CHY_1573 PATRIC:21276271
OMA:SSHARHA BioCyc:CHYD246194:GJCN-1572-MONOMER Uniprot:Q3ABT2
Length = 258
Score = 154 (59.3 bits), Expect = 5.2e-11, P = 5.2e-11
Identities = 48/142 (33%), Positives = 76/142 (53%)
Query: 10 REKKGWLMLEGKRILIDALKANLKLKMVFFSQ--WDILKELPLPEDVPQHRVDYKNIQLW 67
R K G ++EG++++ + + N LK + S+ W K + +D ++ QL+
Sbjct: 26 RRKNGMFIVEGEKLVFELITDNWPLKYLVVSESYWQAKK---IDDDGV--KIVVLTDQLF 80
Query: 68 ---SDLVTPPGIIGI--FELPAHPIASIDPASLPLNIVCDNIRDPGNMGSILRVCAAVGA 122
S+LVTPPGI+ + + + P A D A L V D ++DPGN+G++LR G
Sbjct: 81 NKISELVTPPGILAVACMKSLSWP-AGKDGAFL----VLDGLQDPGNVGTLLRAAFGFGV 135
Query: 123 RQVVCSRGCVDIYDNKVIRAAA 144
V+ VDIY+ KVIRA+A
Sbjct: 136 SGVILLPPAVDIYNPKVIRASA 157
>UNIPROTKB|Q9KTT5 [details] [associations]
symbol:VC_0803 "RNA methyltransferase, TrmH family"
species:243277 "Vibrio cholerae O1 biovar El Tor str. N16961"
[GO:0009451 "RNA modification" evidence=ISS] InterPro:IPR001537
Pfam:PF00588 EMBL:AE003852 GenomeReviews:AE003852_GR GO:GO:0003723
GO:GO:0006396 GO:GO:0008173 GO:GO:0001510 HSSP:P39290 KO:K03437
PIR:E82278 RefSeq:NP_230452.1 ProteinModelPortal:Q9KTT5
DNASU:2615346 GeneID:2615346 KEGG:vch:VC0803 PATRIC:20080715
OMA:WYGIKHI ProtClustDB:CLSK874114 Uniprot:Q9KTT5
Length = 257
Score = 131 (51.2 bits), Expect = 2.3e-08, P = 2.3e-08
Identities = 33/136 (24%), Positives = 65/136 (47%)
Query: 7 RKQREKKGWLMLEGKRILIDALKANLKLKMVFFSQWDILKELPLPEDVPQHRVDYKNIQL 66
+KQR+ G +++G++ +++ + LK++ +F + + + ++
Sbjct: 29 KKQRKAHGLFLVQGEKNVLELTNSTLKVQHIFATAEFLAEHAQALAGFECIEATLDDLTK 88
Query: 67 WSDLVTPPGIIGIFELPAHPIASIDPASLPLNIVCDNIRDPGNMGSILRVCAAVGARQVV 126
S LV+ I + +P + P + L I D + DPGN+G+I+RV G ++
Sbjct: 89 VSTLVSNNAAIAVVAIPHIEV----PKAQGLMIALDGVSDPGNLGTIIRVADWYGISHII 144
Query: 127 CSRGCVDIYDNKVIRA 142
S+ C D Y+ K I A
Sbjct: 145 ASQDCADPYNPKTISA 160
>TIGR_CMR|VC_0803 [details] [associations]
symbol:VC_0803 "RNA methyltransferase, TrmH family"
species:686 "Vibrio cholerae O1 biovar El Tor" [GO:0009451 "RNA
modification" evidence=ISS] InterPro:IPR001537 Pfam:PF00588
EMBL:AE003852 GenomeReviews:AE003852_GR GO:GO:0003723 GO:GO:0006396
GO:GO:0008173 GO:GO:0001510 HSSP:P39290 KO:K03437 PIR:E82278
RefSeq:NP_230452.1 ProteinModelPortal:Q9KTT5 DNASU:2615346
GeneID:2615346 KEGG:vch:VC0803 PATRIC:20080715 OMA:WYGIKHI
ProtClustDB:CLSK874114 Uniprot:Q9KTT5
Length = 257
Score = 131 (51.2 bits), Expect = 2.3e-08, P = 2.3e-08
Identities = 33/136 (24%), Positives = 65/136 (47%)
Query: 7 RKQREKKGWLMLEGKRILIDALKANLKLKMVFFSQWDILKELPLPEDVPQHRVDYKNIQL 66
+KQR+ G +++G++ +++ + LK++ +F + + + ++
Sbjct: 29 KKQRKAHGLFLVQGEKNVLELTNSTLKVQHIFATAEFLAEHAQALAGFECIEATLDDLTK 88
Query: 67 WSDLVTPPGIIGIFELPAHPIASIDPASLPLNIVCDNIRDPGNMGSILRVCAAVGARQVV 126
S LV+ I + +P + P + L I D + DPGN+G+I+RV G ++
Sbjct: 89 VSTLVSNNAAIAVVAIPHIEV----PKAQGLMIALDGVSDPGNLGTIIRVADWYGISHII 144
Query: 127 CSRGCVDIYDNKVIRA 142
S+ C D Y+ K I A
Sbjct: 145 ASQDCADPYNPKTISA 160
>UNIPROTKB|Q9F5K6 [details] [associations]
symbol:aviRb "23S rRNA
(uridine(2479)-2'-O)-methyltransferase" species:1938 "Streptomyces
viridochromogenes" [GO:0008650 "rRNA
(uridine-2'-O-)-methyltransferase activity" evidence=IDA]
[GO:0031167 "rRNA methylation" evidence=IDA] [GO:0032259
"methylation" evidence=IDA] [GO:0046677 "response to antibiotic"
evidence=IDA] InterPro:IPR001537 Pfam:PF00588 GO:GO:0046677
GO:GO:0003723 EMBL:AF333038 PDB:1X7O PDB:1X7P PDBsum:1X7O
PDBsum:1X7P ProteinModelPortal:Q9F5K6 SMR:Q9F5K6
BioCyc:MetaCyc:MONOMER-16328 EvolutionaryTrace:Q9F5K6 GO:GO:0008650
Uniprot:Q9F5K6
Length = 287
Score = 118 (46.6 bits), Expect = 8.8e-07, P = 8.8e-07
Identities = 23/71 (32%), Positives = 40/71 (56%)
Query: 73 PPGIIGIFELPAHPIASIDPASLPLNIVCDNIRDPGNMGSILRVCAAVGARQVVCSRGCV 132
PP ++ + E+PA + I L ++ D PGN+GSI+R A+GA ++ +
Sbjct: 103 PPEVVAVVEMPADDLDRIPVREDFLGVLFDRPTSPGNIGSIIRSADALGAHGLIVAGHAA 162
Query: 133 DIYDNKVIRAA 143
D+YD K +R++
Sbjct: 163 DVYDPKSVRSS 173
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.324 0.141 0.438 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 144 144 0.00091 102 3 11 22 0.41 31
30 0.48 33
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 18
No. of states in DFA: 602 (64 KB)
Total size of DFA: 154 KB (2092 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 14.66u 0.12s 14.78t Elapsed: 00:00:01
Total cpu time: 14.66u 0.12s 14.78t Elapsed: 00:00:01
Start: Thu Aug 15 13:07:10 2013 End: Thu Aug 15 13:07:11 2013