BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy678
(60 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|P0C1Q2|PDE11_MOUSE Dual 3',5'-cyclic-AMP and -GMP phosphodiesterase 11A OS=Mus
musculus GN=Pde11a PE=1 SV=1
Length = 933
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 31/54 (57%), Positives = 42/54 (77%)
Query: 4 AQSLLKCENAAKLLEVVHDLFEEQTSIEQVVVKIMQRAQSLLKCENAAVLLIDE 57
A S + E + LLEVV+DLFEEQT +E++V KIM RAQ+LLKCE +VLL+++
Sbjct: 377 AASRKEYERSRALLEVVNDLFEEQTDLEKIVKKIMHRAQTLLKCERCSVLLLED 430
>sp|Q8VID6|PDE11_RAT Dual 3',5'-cyclic-AMP and -GMP phosphodiesterase 11A OS=Rattus
norvegicus GN=Pde11a PE=1 SV=1
Length = 935
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 31/54 (57%), Positives = 42/54 (77%)
Query: 4 AQSLLKCENAAKLLEVVHDLFEEQTSIEQVVVKIMQRAQSLLKCENAAVLLIDE 57
A S + E + LLEVV+DLFEEQT +E++V KIM RAQ+LLKCE +VLL+++
Sbjct: 377 AASRKEYERSRALLEVVNDLFEEQTDLEKIVKKIMHRAQTLLKCERCSVLLLED 430
>sp|Q9HCR9|PDE11_HUMAN Dual 3',5'-cyclic-AMP and -GMP phosphodiesterase 11A OS=Homo
sapiens GN=PDE11A PE=1 SV=2
Length = 933
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 31/54 (57%), Positives = 42/54 (77%)
Query: 4 AQSLLKCENAAKLLEVVHDLFEEQTSIEQVVVKIMQRAQSLLKCENAAVLLIDE 57
A S + E + LLEVV+DLFEEQT +E++V KIM RAQ+LLKCE +VLL+++
Sbjct: 377 AASRKEYERSRALLEVVNDLFEEQTDLEKIVKKIMHRAQTLLKCERCSVLLLED 430
>sp|Q1KKS3|PDE11_TAKRU Dual 3',5'-cyclic-AMP and -GMP phosphodiesterase 11A OS=Takifugu
rubripes GN=pde11a PE=3 SV=1
Length = 903
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 27/42 (64%), Positives = 36/42 (85%)
Query: 16 LLEVVHDLFEEQTSIEQVVVKIMQRAQSLLKCENAAVLLIDE 57
LLEVV+DLFEEQT +E++V KIM RAQ+LLKCE +V L+++
Sbjct: 343 LLEVVNDLFEEQTDLEKIVRKIMHRAQTLLKCERCSVQLLED 384
>sp|B4PSS5|PDE6_DROYA cGMP-specific 3',5'-cyclic phosphodiesterase OS=Drosophila yakuba
GN=Pde6 PE=3 SV=1
Length = 1149
Score = 43.5 bits (101), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 20/41 (48%), Positives = 28/41 (68%)
Query: 16 LLEVVHDLFEEQTSIEQVVVKIMQRAQSLLKCENAAVLLID 56
LL + +FEEQ ++E +V KIM A+ LLKCE +V L+D
Sbjct: 449 LLNLARSIFEEQNNLECLVTKIMTEARELLKCERCSVFLVD 489
>sp|B3LVW5|PDE6_DROAN cGMP-specific 3',5'-cyclic phosphodiesterase OS=Drosophila
ananassae GN=Pde6 PE=3 SV=1
Length = 1158
Score = 43.5 bits (101), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 20/41 (48%), Positives = 28/41 (68%)
Query: 16 LLEVVHDLFEEQTSIEQVVVKIMQRAQSLLKCENAAVLLID 56
LL + +FEEQ ++E +V KIM A+ LLKCE +V L+D
Sbjct: 413 LLNLARSIFEEQNNLECLVTKIMTEARELLKCERCSVFLVD 453
>sp|B4HEM4|PDE6_DROSE cGMP-specific 3',5'-cyclic phosphodiesterase OS=Drosophila
sechellia GN=Pde6 PE=3 SV=1
Length = 1205
Score = 43.5 bits (101), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 20/41 (48%), Positives = 28/41 (68%)
Query: 16 LLEVVHDLFEEQTSIEQVVVKIMQRAQSLLKCENAAVLLID 56
LL + +FEEQ ++E +V KIM A+ LLKCE +V L+D
Sbjct: 430 LLNLARSIFEEQNNLECLVTKIMTEARELLKCERCSVFLVD 470
>sp|B4QZU1|PDE6_DROSI cGMP-specific 3',5'-cyclic phosphodiesterase OS=Drosophila simulans
GN=Pde6 PE=3 SV=1
Length = 1143
Score = 43.5 bits (101), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 20/41 (48%), Positives = 28/41 (68%)
Query: 16 LLEVVHDLFEEQTSIEQVVVKIMQRAQSLLKCENAAVLLID 56
LL + +FEEQ ++E +V KIM A+ LLKCE +V L+D
Sbjct: 443 LLNLARSIFEEQNNLECLVTKIMTEARELLKCERCSVFLVD 483
>sp|B3P3K2|PDE6_DROER cGMP-specific 3',5'-cyclic phosphodiesterase OS=Drosophila erecta
GN=Pde6 PE=3 SV=1
Length = 1131
Score = 43.5 bits (101), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 20/41 (48%), Positives = 28/41 (68%)
Query: 16 LLEVVHDLFEEQTSIEQVVVKIMQRAQSLLKCENAAVLLID 56
LL + +FEEQ ++E +V KIM A+ LLKCE +V L+D
Sbjct: 431 LLNLARSIFEEQNNLECLVTKIMTEARELLKCERCSVFLVD 471
>sp|Q9VFI9|PDE6_DROME cGMP-specific 3',5'-cyclic phosphodiesterase OS=Drosophila
melanogaster GN=Pde6 PE=1 SV=4
Length = 1118
Score = 43.5 bits (101), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 20/41 (48%), Positives = 28/41 (68%)
Query: 16 LLEVVHDLFEEQTSIEQVVVKIMQRAQSLLKCENAAVLLID 56
LL + +FEEQ ++E +V KIM A+ LLKCE +V L+D
Sbjct: 418 LLNLARSIFEEQNNLECLVTKIMTEARELLKCERCSVFLVD 458
>sp|B4NAL6|PDE6_DROWI cGMP-specific 3',5'-cyclic phosphodiesterase OS=Drosophila
willistoni GN=Pde6 PE=3 SV=1
Length = 1127
Score = 43.5 bits (101), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 20/41 (48%), Positives = 28/41 (68%)
Query: 16 LLEVVHDLFEEQTSIEQVVVKIMQRAQSLLKCENAAVLLID 56
LL + +FEEQ ++E +V KIM A+ LLKCE +V L+D
Sbjct: 426 LLNLARSIFEEQNNLECLVTKIMTEARELLKCERCSVFLVD 466
>sp|B4JXX2|PDE6_DROGR cGMP-specific 3',5'-cyclic phosphodiesterase OS=Drosophila
grimshawi GN=Pde6 PE=3 SV=1
Length = 1078
Score = 43.5 bits (101), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 20/41 (48%), Positives = 28/41 (68%)
Query: 16 LLEVVHDLFEEQTSIEQVVVKIMQRAQSLLKCENAAVLLID 56
LL + +FEEQ ++E +V KIM A+ LLKCE +V L+D
Sbjct: 367 LLNLARSIFEEQNNLECLVTKIMTEARELLKCERCSVFLVD 407
>sp|B4K9L4|PDE6_DROMO cGMP-specific 3',5'-cyclic phosphodiesterase OS=Drosophila
mojavensis GN=Pde6 PE=3 SV=1
Length = 1116
Score = 43.5 bits (101), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 20/41 (48%), Positives = 28/41 (68%)
Query: 16 LLEVVHDLFEEQTSIEQVVVKIMQRAQSLLKCENAAVLLID 56
LL + +FEEQ ++E +V KIM A+ LLKCE +V L+D
Sbjct: 412 LLNLARSIFEEQNNLECLVTKIMTEARELLKCERCSVFLVD 452
>sp|B4LVU6|PDE6_DROVI cGMP-specific 3',5'-cyclic phosphodiesterase OS=Drosophila virilis
GN=Pde6 PE=3 SV=1
Length = 893
Score = 43.1 bits (100), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 20/41 (48%), Positives = 28/41 (68%)
Query: 16 LLEVVHDLFEEQTSIEQVVVKIMQRAQSLLKCENAAVLLID 56
LL + +FEEQ ++E +V KIM A+ LLKCE +V L+D
Sbjct: 192 LLNLARSIFEEQNNLECLVTKIMTEARELLKCERCSVFLVD 232
>sp|Q298P4|PDE6_DROPS cGMP-specific 3',5'-cyclic phosphodiesterase OS=Drosophila
pseudoobscura pseudoobscura GN=Pde6 PE=3 SV=3
Length = 1110
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 19/41 (46%), Positives = 27/41 (65%)
Query: 16 LLEVVHDLFEEQTSIEQVVVKIMQRAQSLLKCENAAVLLID 56
LL + +FEEQ ++E +V KIM A+ LL CE +V L+D
Sbjct: 404 LLNLARSIFEEQNNLECLVTKIMTEARELLNCERCSVFLVD 444
>sp|B4G4E5|PDE6_DROPE cGMP-specific 3',5'-cyclic phosphodiesterase OS=Drosophila
persimilis GN=Pde6 PE=3 SV=1
Length = 1276
Score = 41.6 bits (96), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 19/41 (46%), Positives = 27/41 (65%)
Query: 16 LLEVVHDLFEEQTSIEQVVVKIMQRAQSLLKCENAAVLLID 56
LL + +FEEQ ++E +V KIM A+ LL CE +V L+D
Sbjct: 461 LLNLARSIFEEQNNLECLVTKIMTEARELLNCERCSVFLVD 501
>sp|Q9VJ79|PDE11_DROME Dual 3',5'-cyclic-AMP and -GMP phosphodiesterase 11 OS=Drosophila
melanogaster GN=Pde11 PE=1 SV=4
Length = 1451
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 17/43 (39%), Positives = 31/43 (72%)
Query: 16 LLEVVHDLFEEQTSIEQVVVKIMQRAQSLLKCENAAVLLIDES 58
LL++ +FEEQ++IE +V +I+ QSL++C+ +LL+ E+
Sbjct: 591 LLDLARMIFEEQSTIEHMVFRILTHMQSLIQCQRVQILLVHEA 633
>sp|P91119|PDE5_CAEEL Probable 3',5'-cyclic phosphodiesterase pde-5 OS=Caenorhabditis
elegans GN=pde-5 PE=3 SV=3
Length = 728
Score = 35.4 bits (80), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 18/57 (31%), Positives = 33/57 (57%), Gaps = 7/57 (12%)
Query: 11 ENAAK-------LLEVVHDLFEEQTSIEQVVVKIMQRAQSLLKCENAAVLLIDESSS 60
EN AK LL+V +F + S++ V++K+M AQ L+ + A++ L+D ++
Sbjct: 189 ENIAKQRKLSNFLLDVARSIFHDIVSMDAVIIKVMNFAQKLVDADRASLFLVDSKNA 245
>sp|O76074|PDE5A_HUMAN cGMP-specific 3',5'-cyclic phosphodiesterase OS=Homo sapiens
GN=PDE5A PE=1 SV=2
Length = 875
Score = 28.9 bits (63), Expect = 9.7, Method: Compositional matrix adjust.
Identities = 17/55 (30%), Positives = 31/55 (56%)
Query: 6 SLLKCENAAKLLEVVHDLFEEQTSIEQVVVKIMQRAQSLLKCENAAVLLIDESSS 60
SLL+ + LL++ +FEEQ S+E ++ KI S ++ + + ++DE S
Sbjct: 323 SLLENKRNQVLLDLASLIFEEQQSLEVILKKIAATIISFMQVQKCTIFIVDEDCS 377
>sp|Q28156|PDE5A_BOVIN cGMP-specific 3',5'-cyclic phosphodiesterase OS=Bos taurus GN=PDE5A
PE=1 SV=1
Length = 865
Score = 28.9 bits (63), Expect = 9.8, Method: Compositional matrix adjust.
Identities = 17/55 (30%), Positives = 31/55 (56%)
Query: 6 SLLKCENAAKLLEVVHDLFEEQTSIEQVVVKIMQRAQSLLKCENAAVLLIDESSS 60
SLL+ + LL++ +FEEQ S+E ++ KI S ++ + + ++DE S
Sbjct: 313 SLLENKRNQVLLDLASLIFEEQQSLEVILKKIAATIISFMQVQKCTIFIVDEDCS 367
>sp|O77746|PDE5A_CANFA cGMP-specific 3',5'-cyclic phosphodiesterase OS=Canis familiaris
GN=PDE5A PE=2 SV=1
Length = 865
Score = 28.9 bits (63), Expect = 9.9, Method: Compositional matrix adjust.
Identities = 17/55 (30%), Positives = 31/55 (56%)
Query: 6 SLLKCENAAKLLEVVHDLFEEQTSIEQVVVKIMQRAQSLLKCENAAVLLIDESSS 60
SLL+ + LL++ +FEEQ S+E ++ KI S ++ + + ++DE S
Sbjct: 313 SLLENKRNQVLLDLASLIFEEQQSLEVILKKIAATIISFMQVQKCTIFIVDEDCS 367
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.316 0.126 0.317
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 14,213,269
Number of Sequences: 539616
Number of extensions: 300489
Number of successful extensions: 1359
Number of sequences better than 100.0: 43
Number of HSP's better than 100.0 without gapping: 38
Number of HSP's successfully gapped in prelim test: 5
Number of HSP's that attempted gapping in prelim test: 1314
Number of HSP's gapped (non-prelim): 50
length of query: 60
length of database: 191,569,459
effective HSP length: 33
effective length of query: 27
effective length of database: 173,762,131
effective search space: 4691577537
effective search space used: 4691577537
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 55 (25.8 bits)