RPS-BLAST 2.2.26 [Sep-21-2011]
Database: scop70_1_75
13,730 sequences; 2,407,596 total letters
Searching..................................................done
Query= psy679
(510 letters)
>d1a1ia3 g.37.1.1 (A:160-187) ZIF268 {Mouse (Mus musculus) [TaxId:
10090]}
Length = 28
Score = 63.3 bits (154), Expect = 6e-14
Identities = 22/28 (78%), Positives = 27/28 (96%)
Query: 429 EKPFSCDVCGRKFARSDEKKRHAKVHLK 456
EKPF+CD+CGRKFARSDE+KRH K+HL+
Sbjct: 1 EKPFACDICGRKFARSDERKRHTKIHLR 28
Score = 42.9 bits (101), Expect = 9e-07
Identities = 15/28 (53%), Positives = 21/28 (75%), Gaps = 2/28 (7%)
Query: 371 ERPYACPVENCDRRFSRSDELTRHIRIH 398
E+P+AC + C R+F+RSDE RH +IH
Sbjct: 1 EKPFACDI--CGRKFARSDERKRHTKIH 26
>d2csha1 g.37.1.1 (A:8-60) Zinc finger protein 297b {Human (Homo
sapiens) [TaxId: 9606]}
Length = 53
Score = 61.2 bits (148), Expect = 6e-13
Identities = 16/56 (28%), Positives = 29/56 (51%), Gaps = 3/56 (5%)
Query: 371 ERPYACPVENCDRRFSRSDELTRHIRIHTGQKPFQCRICMRSFSRSDHLTTHIRTH 426
++ Y C C + F+ + RH+ +H G +P+ C +C + F HL H++ H
Sbjct: 1 DKLYPC---QCGKSFTHKSQRDRHMSMHLGLRPYGCGVCGKKFKMKHHLVGHMKIH 53
Score = 52.8 bits (126), Expect = 5e-10
Identities = 18/53 (33%), Positives = 27/53 (50%), Gaps = 1/53 (1%)
Query: 402 KPFQCRICMRSFSRSDHLTTHIRTHTGEKPFSCDVCGRKFARSDEKKRHAKVH 454
K + C+ C +SF+ H+ H G +P+ C VCG+KF H K+H
Sbjct: 2 KLYPCQ-CGKSFTHKSQRDRHMSMHLGLRPYGCGVCGKKFKMKHHLVGHMKIH 53
Score = 32.0 bits (72), Expect = 0.013
Identities = 8/41 (19%), Positives = 14/41 (34%), Gaps = 4/41 (9%)
Query: 362 NRPSKTPVHERPYACPV----ENCDRRFSRSDELTRHIRIH 398
S+ H + C ++F L H++IH
Sbjct: 13 THKSQRDRHMSMHLGLRPYGCGVCGKKFKMKHHLVGHMKIH 53
Score = 28.9 bits (64), Expect = 0.18
Identities = 10/33 (30%), Positives = 16/33 (48%), Gaps = 1/33 (3%)
Query: 429 EKPFSCDVCGRKFARSDEKKRHAKVHLKQRSKK 461
+K + C CG+ F ++ RH +HL R
Sbjct: 1 DKLYPCQ-CGKSFTHKSQRDRHMSMHLGLRPYG 32
>d1x6ea1 g.37.1.1 (A:8-40) Zinc finger protein 24 {Human (Homo
sapiens) [TaxId: 9606]}
Length = 33
Score = 60.3 bits (147), Expect = 7e-13
Identities = 18/33 (54%), Positives = 23/33 (69%)
Query: 397 IHTGQKPFQCRICMRSFSRSDHLTTHIRTHTGE 429
IH+G+KP+ C C ++FSRS L H R HTGE
Sbjct: 1 IHSGEKPYGCVECGKAFSRSSILVQHQRVHTGE 33
Score = 46.1 bits (110), Expect = 7e-08
Identities = 14/29 (48%), Positives = 20/29 (68%)
Query: 426 HTGEKPFSCDVCGRKFARSDEKKRHAKVH 454
H+GEKP+ C CG+ F+RS +H +VH
Sbjct: 2 HSGEKPYGCVECGKAFSRSSILVQHQRVH 30
Score = 44.5 bits (106), Expect = 3e-07
Identities = 16/34 (47%), Positives = 21/34 (61%), Gaps = 4/34 (11%)
Query: 369 VH--ERPYACPVENCDRRFSRSDELTRHIRIHTG 400
+H E+PY C C + FSRS L +H R+HTG
Sbjct: 1 IHSGEKPYGCVE--CGKAFSRSSILVQHQRVHTG 32
>d2cota2 g.37.1.1 (A:7-44) Zinc finger and SCAN domain-containing
protein 16, ZSCAN16 {Human (Homo sapiens) [TaxId: 9606]}
Length = 38
Score = 59.8 bits (145), Expect = 1e-12
Identities = 15/37 (40%), Positives = 21/37 (56%)
Query: 393 RHIRIHTGQKPFQCRICMRSFSRSDHLTTHIRTHTGE 429
R ++ ++C C +SFS S L+ H RTHTGE
Sbjct: 2 RSEWQQRERRRYKCDECGKSFSHSSDLSKHRRTHTGE 38
Score = 45.9 bits (109), Expect = 9e-08
Identities = 8/33 (24%), Positives = 15/33 (45%)
Query: 422 HIRTHTGEKPFSCDVCGRKFARSDEKKRHAKVH 454
+ + CD CG+ F+ S + +H + H
Sbjct: 3 SEWQQRERRRYKCDECGKSFSHSSDLSKHRRTH 35
Score = 39.0 bits (91), Expect = 3e-05
Identities = 13/30 (43%), Positives = 18/30 (60%), Gaps = 2/30 (6%)
Query: 371 ERPYACPVENCDRRFSRSDELTRHIRIHTG 400
R Y C + C + FS S +L++H R HTG
Sbjct: 10 RRRYKC--DECGKSFSHSSDLSKHRRTHTG 37
>d2epsa1 g.37.1.1 (A:408-446) PATZ1 {Human (Homo sapiens) [TaxId:
9606]}
Length = 39
Score = 60.0 bits (146), Expect = 1e-12
Identities = 18/39 (46%), Positives = 24/39 (61%), Gaps = 1/39 (2%)
Query: 399 TGQKPFQCRICMRSFSRSDHLTTHIR-THTGEKPFSCDV 436
+ KP+ C+ C + FSR DHL HI+ HT E+P C V
Sbjct: 1 SVGKPYICQSCGKGFSRPDHLNGHIKQVHTSERPHKCQV 39
Score = 51.5 bits (124), Expect = 1e-09
Identities = 15/39 (38%), Positives = 24/39 (61%), Gaps = 3/39 (7%)
Query: 371 ERPYACPVENCDRRFSRSDELTRHIR-IHTGQKPFQCRI 408
+PY C C + FSR D L HI+ +HT ++P +C++
Sbjct: 3 GKPYICQS--CGKGFSRPDHLNGHIKQVHTSERPHKCQV 39
Score = 33.8 bits (78), Expect = 0.002
Identities = 10/26 (38%), Positives = 14/26 (53%)
Query: 427 TGEKPFSCDVCGRKFARSDEKKRHAK 452
+ KP+ C CG+ F+R D H K
Sbjct: 1 SVGKPYICQSCGKGFSRPDHLNGHIK 26
>d1x6ha2 g.37.1.1 (A:8-43) Transcriptional repressor CTCF {Human
(Homo sapiens) [TaxId: 9606]}
Length = 36
Score = 58.5 bits (142), Expect = 3e-12
Identities = 11/35 (31%), Positives = 18/35 (51%)
Query: 396 RIHTGQKPFQCRICMRSFSRSDHLTTHIRTHTGEK 430
R HTG+KP+ C C ++F + L H + +
Sbjct: 1 RTHTGEKPYACSHCDKTFRQKQLLDMHFKRYHDPN 35
Score = 48.9 bits (117), Expect = 8e-09
Identities = 13/31 (41%), Positives = 18/31 (58%)
Query: 424 RTHTGEKPFSCDVCGRKFARSDEKKRHAKVH 454
RTHTGEKP++C C + F + H K +
Sbjct: 1 RTHTGEKPYACSHCDKTFRQKQLLDMHFKRY 31
Score = 40.4 bits (95), Expect = 9e-06
Identities = 10/32 (31%), Positives = 16/32 (50%), Gaps = 2/32 (6%)
Query: 371 ERPYACPVENCDRRFSRSDELTRHIRIHTGQK 402
E+PYAC +CD+ F + L H + +
Sbjct: 6 EKPYAC--SHCDKTFRQKQLLDMHFKRYHDPN 35
>d2ct1a2 g.37.1.1 (A:8-43) Transcriptional repressor CTCF {Human
(Homo sapiens) [TaxId: 9606]}
Length = 36
Score = 56.1 bits (136), Expect = 3e-11
Identities = 14/35 (40%), Positives = 22/35 (62%), Gaps = 1/35 (2%)
Query: 396 RIHTGQKPFQCRICMRSFSRSDHLTTHI-RTHTGE 429
R H+G+KP++C IC F++S + HI + HT
Sbjct: 1 RTHSGEKPYECYICHARFTQSGTMKMHILQKHTEN 35
Score = 48.1 bits (115), Expect = 2e-08
Identities = 13/31 (41%), Positives = 18/31 (58%)
Query: 424 RTHTGEKPFSCDVCGRKFARSDEKKRHAKVH 454
RTH+GEKP+ C +C +F +S K H
Sbjct: 1 RTHSGEKPYECYICHARFTQSGTMKMHILQK 31
Score = 38.8 bits (91), Expect = 3e-05
Identities = 12/31 (38%), Positives = 18/31 (58%), Gaps = 3/31 (9%)
Query: 371 ERPYACPVENCDRRFSRSDELTRHI-RIHTG 400
E+PY C + C RF++S + HI + HT
Sbjct: 6 EKPYECYI--CHARFTQSGTMKMHILQKHTE 34
>d2dlka2 g.37.1.1 (A:38-73) Zinc finger protein 692, ZNF692 {Human
(Homo sapiens) [TaxId: 9606]}
Length = 36
Score = 55.5 bits (134), Expect = 3e-11
Identities = 8/33 (24%), Positives = 18/33 (54%)
Query: 374 YACPVENCDRRFSRSDELTRHIRIHTGQKPFQC 406
++CP C + F+ L H+++H+ + + C
Sbjct: 2 FSCPEPACGKSFNFKKHLKEHMKLHSDTRDYIC 34
Score = 52.0 bits (125), Expect = 6e-10
Identities = 10/34 (29%), Positives = 18/34 (52%), Gaps = 2/34 (5%)
Query: 404 FQC--RICMRSFSRSDHLTTHIRTHTGEKPFSCD 435
F C C +SF+ HL H++ H+ + + C+
Sbjct: 2 FSCPEPACGKSFNFKKHLKEHMKLHSDTRDYICE 35
Score = 25.1 bits (55), Expect = 2.6
Identities = 7/22 (31%), Positives = 9/22 (40%)
Query: 433 SCDVCGRKFARSDEKKRHAKVH 454
CG+ F K H K+H
Sbjct: 5 PEPACGKSFNFKKHLKEHMKLH 26
>d1p7aa_ g.37.1.1 (A:) Kruppel-like factor 3, Bklf {Mouse (Mus
musculus) [TaxId: 10090]}
Length = 37
Score = 55.5 bits (134), Expect = 4e-11
Identities = 20/35 (57%), Positives = 21/35 (60%)
Query: 394 HIRIHTGQKPFQCRICMRSFSRSDHLTTHIRTHTG 428
R TG KPFQC C RSFSRSDHL H + H
Sbjct: 2 STRGSTGIKPFQCPDCDRSFSRSDHLALHRKRHML 36
Score = 50.5 bits (121), Expect = 2e-09
Identities = 16/34 (47%), Positives = 18/34 (52%)
Query: 422 HIRTHTGEKPFSCDVCGRKFARSDEKKRHAKVHL 455
R TG KPF C C R F+RSD H K H+
Sbjct: 2 STRGSTGIKPFQCPDCDRSFSRSDHLALHRKRHM 35
Score = 36.6 bits (85), Expect = 2e-04
Identities = 13/30 (43%), Positives = 17/30 (56%), Gaps = 2/30 (6%)
Query: 371 ERPYACPVENCDRRFSRSDELTRHIRIHTG 400
+P+ C +CDR FSRSD L H + H
Sbjct: 9 IKPFQC--PDCDRSFSRSDHLALHRKRHML 36
>d1zfda_ g.37.1.1 (A:) SWI5 zinc-finger domains {Baker's yeast
(Saccharomyces cerevisiae) [TaxId: 4932]}
Length = 32
Score = 55.0 bits (133), Expect = 6e-11
Identities = 12/31 (38%), Positives = 19/31 (61%)
Query: 371 ERPYACPVENCDRRFSRSDELTRHIRIHTGQ 401
+RPY+C CD+ F R+ +L RH + H +
Sbjct: 1 DRPYSCDHPGCDKAFVRNHDLIRHKKSHQEK 31
Score = 44.6 bits (106), Expect = 2e-07
Identities = 8/30 (26%), Positives = 16/30 (53%), Gaps = 2/30 (6%)
Query: 402 KPFQCRI--CMRSFSRSDHLTTHIRTHTGE 429
+P+ C C ++F R+ L H ++H +
Sbjct: 2 RPYSCDHPGCDKAFVRNHDLIRHKKSHQEK 31
Score = 37.7 bits (88), Expect = 7e-05
Identities = 11/31 (35%), Positives = 19/31 (61%), Gaps = 2/31 (6%)
Query: 429 EKPFSCDV--CGRKFARSDEKKRHAKVHLKQ 457
++P+SCD C + F R+ + RH K H ++
Sbjct: 1 DRPYSCDHPGCDKAFVRNHDLIRHKKSHQEK 31
>d2adra1 g.37.1.1 (A:102-130) ADR1 {Synthetic, based on
Saccharomyces cerevisiae sequence}
Length = 29
Score = 53.8 bits (130), Expect = 1e-10
Identities = 14/29 (48%), Positives = 20/29 (68%)
Query: 402 KPFQCRICMRSFSRSDHLTTHIRTHTGEK 430
+ F C +C R+F+R +HL H R+HT EK
Sbjct: 1 RSFVCEVCTRAFARQEHLKRHYRSHTNEK 29
Score = 47.2 bits (113), Expect = 3e-08
Identities = 14/31 (45%), Positives = 18/31 (58%), Gaps = 2/31 (6%)
Query: 372 RPYACPVENCDRRFSRSDELTRHIRIHTGQK 402
R + C V C R F+R + L RH R HT +K
Sbjct: 1 RSFVCEV--CTRAFARQEHLKRHYRSHTNEK 29
Score = 35.7 bits (83), Expect = 3e-04
Identities = 12/25 (48%), Positives = 16/25 (64%)
Query: 430 KPFSCDVCGRKFARSDEKKRHAKVH 454
+ F C+VC R FAR + KRH + H
Sbjct: 1 RSFVCEVCTRAFARQEHLKRHYRSH 25
>d1sp2a_ g.37.1.1 (A:) Transcription factor sp1 {Human (Homo
sapiens) [TaxId: 9606]}
Length = 31
Score = 52.3 bits (126), Expect = 4e-10
Identities = 18/31 (58%), Positives = 22/31 (70%)
Query: 372 RPYACPVENCDRRFSRSDELTRHIRIHTGQK 402
RP+ C C +RF+RSDEL RH R HTG+K
Sbjct: 1 RPFMCTWSYCGKRFTRSDELQRHKRTHTGEK 31
Score = 48.9 bits (117), Expect = 8e-09
Identities = 17/31 (54%), Positives = 20/31 (64%), Gaps = 2/31 (6%)
Query: 402 KPFQCRI--CMRSFSRSDHLTTHIRTHTGEK 430
+PF C C + F+RSD L H RTHTGEK
Sbjct: 1 RPFMCTWSYCGKRFTRSDELQRHKRTHTGEK 31
Score = 31.5 bits (72), Expect = 0.011
Identities = 13/27 (48%), Positives = 18/27 (66%), Gaps = 2/27 (7%)
Query: 430 KPFSCDV--CGRKFARSDEKKRHAKVH 454
+PF C CG++F RSDE +RH + H
Sbjct: 1 RPFMCTWSYCGKRFTRSDELQRHKRTH 27
>d1sp1a_ g.37.1.1 (A:) Transcription factor sp1 {Human (Homo
sapiens) [TaxId: 9606]}
Length = 29
Score = 52.3 bits (126), Expect = 4e-10
Identities = 15/29 (51%), Positives = 19/29 (65%)
Query: 402 KPFQCRICMRSFSRSDHLTTHIRTHTGEK 430
K F C C + F RSDHL+ HI+TH +K
Sbjct: 1 KKFACPECPKRFMRSDHLSKHIKTHQNKK 29
Score = 44.6 bits (106), Expect = 3e-07
Identities = 14/31 (45%), Positives = 21/31 (67%), Gaps = 2/31 (6%)
Query: 372 RPYACPVENCDRRFSRSDELTRHIRIHTGQK 402
+ +ACP C +RF RSD L++HI+ H +K
Sbjct: 1 KKFACPE--CPKRFMRSDHLSKHIKTHQNKK 29
Score = 35.0 bits (81), Expect = 6e-04
Identities = 11/25 (44%), Positives = 15/25 (60%)
Query: 430 KPFSCDVCGRKFARSDEKKRHAKVH 454
K F+C C ++F RSD +H K H
Sbjct: 1 KKFACPECPKRFMRSDHLSKHIKTH 25
>d1ubdc4 g.37.1.1 (C:381-408) Ying-yang 1 (yy1, zinc finger domain)
{Human (Homo sapiens) [TaxId: 9606]}
Length = 28
Score = 51.2 bits (123), Expect = 1e-09
Identities = 12/28 (42%), Positives = 18/28 (64%)
Query: 372 RPYACPVENCDRRFSRSDELTRHIRIHT 399
RPY CP + C+++F++S L HI H
Sbjct: 1 RPYVCPFDGCNKKFAQSTNLKSHILTHA 28
Score = 43.5 bits (103), Expect = 6e-07
Identities = 10/28 (35%), Positives = 17/28 (60%), Gaps = 2/28 (7%)
Query: 402 KPFQCRI--CMRSFSRSDHLTTHIRTHT 427
+P+ C C + F++S +L +HI TH
Sbjct: 1 RPYVCPFDGCNKKFAQSTNLKSHILTHA 28
Score = 35.8 bits (83), Expect = 3e-04
Identities = 10/27 (37%), Positives = 14/27 (51%), Gaps = 2/27 (7%)
Query: 430 KPFSCDV--CGRKFARSDEKKRHAKVH 454
+P+ C C +KFA+S K H H
Sbjct: 1 RPYVCPFDGCNKKFAQSTNLKSHILTH 27
>d1a1ia1 g.37.1.1 (A:103-131) ZIF268 {Mouse (Mus musculus) [TaxId:
10090]}
Length = 29
Score = 50.8 bits (122), Expect = 2e-09
Identities = 26/29 (89%), Positives = 28/29 (96%)
Query: 372 RPYACPVENCDRRFSRSDELTRHIRIHTG 400
RPYACPVE+CDRRFSRS +LTRHIRIHTG
Sbjct: 1 RPYACPVESCDRRFSRSADLTRHIRIHTG 29
Score = 44.6 bits (106), Expect = 3e-07
Identities = 16/29 (55%), Positives = 18/29 (62%), Gaps = 2/29 (6%)
Query: 402 KPFQC--RICMRSFSRSDHLTTHIRTHTG 428
+P+ C C R FSRS LT HIR HTG
Sbjct: 1 RPYACPVESCDRRFSRSADLTRHIRIHTG 29
Score = 31.1 bits (71), Expect = 0.016
Identities = 11/27 (40%), Positives = 19/27 (70%), Gaps = 2/27 (7%)
Query: 430 KPFSCDV--CGRKFARSDEKKRHAKVH 454
+P++C V C R+F+RS + RH ++H
Sbjct: 1 RPYACPVESCDRRFSRSADLTRHIRIH 27
>d2glia3 g.37.1.1 (A:168-197) Five-finger GLI1 {Human (Homo sapiens)
[TaxId: 9606]}
Length = 30
Score = 49.6 bits (119), Expect = 5e-09
Identities = 12/30 (40%), Positives = 19/30 (63%)
Query: 372 RPYACPVENCDRRFSRSDELTRHIRIHTGQ 401
+P+ C E C + +SR + L H+R HTG+
Sbjct: 1 KPHKCTFEGCRKSYSRLENLKTHLRSHTGE 30
Score = 46.6 bits (111), Expect = 5e-08
Identities = 15/30 (50%), Positives = 22/30 (73%), Gaps = 2/30 (6%)
Query: 402 KPFQC--RICMRSFSRSDHLTTHIRTHTGE 429
KP +C C +S+SR ++L TH+R+HTGE
Sbjct: 1 KPHKCTFEGCRKSYSRLENLKTHLRSHTGE 30
Score = 30.0 bits (68), Expect = 0.038
Identities = 8/27 (29%), Positives = 13/27 (48%), Gaps = 2/27 (7%)
Query: 430 KPFSCDV--CGRKFARSDEKKRHAKVH 454
KP C C + ++R + K H + H
Sbjct: 1 KPHKCTFEGCRKSYSRLENLKTHLRSH 27
>d1a1ia2 g.37.1.1 (A:132-159) ZIF268 {Mouse (Mus musculus) [TaxId:
10090]}
Length = 28
Score = 48.4 bits (116), Expect = 1e-08
Identities = 27/28 (96%), Positives = 28/28 (100%)
Query: 401 QKPFQCRICMRSFSRSDHLTTHIRTHTG 428
QKPFQCRICMR+FSRSDHLTTHIRTHTG
Sbjct: 1 QKPFQCRICMRNFSRSDHLTTHIRTHTG 28
Score = 45.7 bits (109), Expect = 9e-08
Identities = 17/30 (56%), Positives = 21/30 (70%), Gaps = 2/30 (6%)
Query: 371 ERPYACPVENCDRRFSRSDELTRHIRIHTG 400
++P+ C + C R FSRSD LT HIR HTG
Sbjct: 1 QKPFQCRI--CMRNFSRSDHLTTHIRTHTG 28
Score = 37.2 bits (87), Expect = 1e-04
Identities = 12/26 (46%), Positives = 16/26 (61%)
Query: 429 EKPFSCDVCGRKFARSDEKKRHAKVH 454
+KPF C +C R F+RSD H + H
Sbjct: 1 QKPFQCRICMRNFSRSDHLTTHIRTH 26
>d1srka_ g.37.1.1 (A:) Zinc finger protein ZFPM1 (FOG-1) {Mouse (Mus
musculus) [TaxId: 10090]}
Length = 35
Score = 48.6 bits (116), Expect = 1e-08
Identities = 11/32 (34%), Positives = 20/32 (62%)
Query: 398 HTGQKPFQCRICMRSFSRSDHLTTHIRTHTGE 429
+G++PF CRIC+ +F+ + H++ HT
Sbjct: 2 SSGKRPFVCRICLSAFTTKANCARHLKVHTDT 33
Score = 41.3 bits (97), Expect = 4e-06
Identities = 11/29 (37%), Positives = 15/29 (51%)
Query: 426 HTGEKPFSCDVCGRKFARSDEKKRHAKVH 454
+G++PF C +C F RH KVH
Sbjct: 2 SSGKRPFVCRICLSAFTTKANCARHLKVH 30
Score = 39.0 bits (91), Expect = 3e-05
Identities = 9/30 (30%), Positives = 16/30 (53%), Gaps = 2/30 (6%)
Query: 371 ERPYACPVENCDRRFSRSDELTRHIRIHTG 400
+RP+ C + C F+ RH+++HT
Sbjct: 5 KRPFVCRI--CLSAFTTKANCARHLKVHTD 32
>d1ncsa_ g.37.1.1 (A:) SWI5 zinc-finger domains {Baker's yeast
(Saccharomyces cerevisiae) [TaxId: 4932]}
Length = 47
Score = 48.0 bits (114), Expect = 2e-08
Identities = 9/42 (21%), Positives = 23/42 (54%), Gaps = 3/42 (7%)
Query: 391 LTRHIRIHTGQKPFQCRICM--RSFSRSDHLTTHIRTHTGEK 430
+ ++++ K F+C ++F R ++ +HI+TH ++
Sbjct: 7 IDKYVK-EMPDKTFECLFPGCTKTFKRRYNIRSHIQTHLEDR 47
Score = 43.0 bits (101), Expect = 1e-06
Identities = 7/32 (21%), Positives = 14/32 (43%)
Query: 371 ERPYACPVENCDRRFSRSDELTRHIRIHTGQK 402
++ + C C + F R + HI+ H +
Sbjct: 16 DKTFECLFPGCTKTFKRRYNIRSHIQTHLEDR 47
Score = 37.2 bits (86), Expect = 2e-04
Identities = 9/43 (20%), Positives = 18/43 (41%), Gaps = 3/43 (6%)
Query: 418 HLTTHIRTHTGEKPFSCDVC--GRKFARSDEKKRHAKVHLKQR 458
+ +++ +K F C + F R + H + HL+ R
Sbjct: 6 SIDKYVK-EMPDKTFECLFPGCTKTFKRRYNIRSHIQTHLEDR 47
>d1ubdc3 g.37.1.1 (C:351-380) Ying-yang 1 (yy1, zinc finger domain)
{Human (Homo sapiens) [TaxId: 9606]}
Length = 30
Score = 47.0 bits (112), Expect = 4e-08
Identities = 14/30 (46%), Positives = 18/30 (60%)
Query: 372 RPYACPVENCDRRFSRSDELTRHIRIHTGQ 401
+P+ C E C +RFS L H+RIHTG
Sbjct: 1 KPFQCTFEGCGKRFSLDFNLRTHVRIHTGD 30
Score = 43.5 bits (103), Expect = 6e-07
Identities = 15/30 (50%), Positives = 19/30 (63%), Gaps = 2/30 (6%)
Query: 402 KPFQC--RICMRSFSRSDHLTTHIRTHTGE 429
KPFQC C + FS +L TH+R HTG+
Sbjct: 1 KPFQCTFEGCGKRFSLDFNLRTHVRIHTGD 30
Score = 28.5 bits (64), Expect = 0.13
Identities = 9/27 (33%), Positives = 15/27 (55%), Gaps = 2/27 (7%)
Query: 430 KPFSCDV--CGRKFARSDEKKRHAKVH 454
KPF C CG++F+ + H ++H
Sbjct: 1 KPFQCTFEGCGKRFSLDFNLRTHVRIH 27
>d1x6ea2 g.37.1.1 (A:41-66) Zinc finger protein 24 {Human (Homo
sapiens) [TaxId: 9606]}
Length = 26
Score = 41.0 bits (97), Expect = 5e-06
Identities = 11/26 (42%), Positives = 17/26 (65%)
Query: 402 KPFQCRICMRSFSRSDHLTTHIRTHT 427
KP++C C ++FS++ L H R HT
Sbjct: 1 KPYKCLECGKAFSQNSGLINHQRIHT 26
Score = 35.3 bits (82), Expect = 5e-04
Identities = 12/28 (42%), Positives = 16/28 (57%), Gaps = 2/28 (7%)
Query: 372 RPYACPVENCDRRFSRSDELTRHIRIHT 399
+PY C C + FS++ L H RIHT
Sbjct: 1 KPYKC--LECGKAFSQNSGLINHQRIHT 26
Score = 28.7 bits (65), Expect = 0.10
Identities = 8/25 (32%), Positives = 15/25 (60%)
Query: 430 KPFSCDVCGRKFARSDEKKRHAKVH 454
KP+ C CG+ F+++ H ++H
Sbjct: 1 KPYKCLECGKAFSQNSGLINHQRIH 25
>d2epqa1 g.37.1.1 (A:380-411) PATZ1 {Human (Homo sapiens) [TaxId:
9606]}
Length = 32
Score = 36.6 bits (84), Expect = 2e-04
Identities = 11/28 (39%), Positives = 18/28 (64%)
Query: 401 QKPFQCRICMRSFSRSDHLTTHIRTHTG 428
+KP+ C +C F R D ++ H+R+H G
Sbjct: 1 EKPYSCPVCGLRFKRKDRMSYHVRSHDG 28
Score = 35.8 bits (82), Expect = 3e-04
Identities = 15/30 (50%), Positives = 20/30 (66%), Gaps = 2/30 (6%)
Query: 371 ERPYACPVENCDRRFSRSDELTRHIRIHTG 400
E+PY+CPV C RF R D ++ H+R H G
Sbjct: 1 EKPYSCPV--CGLRFKRKDRMSYHVRSHDG 28
Score = 32.3 bits (73), Expect = 0.006
Identities = 13/26 (50%), Positives = 16/26 (61%)
Query: 429 EKPFSCDVCGRKFARSDEKKRHAKVH 454
EKP+SC VCG +F R D H + H
Sbjct: 1 EKPYSCPVCGLRFKRKDRMSYHVRSH 26
>d2dmda2 g.37.1.1 (A:8-33) Zinc finger protein 64, ZFP68 {Human
(Homo sapiens) [TaxId: 9606]}
Length = 26
Score = 36.6 bits (84), Expect = 2e-04
Identities = 14/26 (53%), Positives = 18/26 (69%)
Query: 403 PFQCRICMRSFSRSDHLTTHIRTHTG 428
P +C +C + FSR D L TH+R HTG
Sbjct: 1 PHKCEVCGKCFSRKDKLKTHMRCHTG 26
Score = 33.1 bits (75), Expect = 0.002
Identities = 14/28 (50%), Positives = 18/28 (64%), Gaps = 2/28 (7%)
Query: 373 PYACPVENCDRRFSRSDELTRHIRIHTG 400
P+ C V C + FSR D+L H+R HTG
Sbjct: 1 PHKCEV--CGKCFSRKDKLKTHMRCHTG 26
Score = 29.3 bits (65), Expect = 0.063
Identities = 11/24 (45%), Positives = 16/24 (66%)
Query: 431 PFSCDVCGRKFARSDEKKRHAKVH 454
P C+VCG+ F+R D+ K H + H
Sbjct: 1 PHKCEVCGKCFSRKDKLKTHMRCH 24
>d2adra2 g.37.1.1 (A:131-161) ADR1 {Synthetic, based on
Saccharomyces cerevisiae sequence}
Length = 31
Score = 35.6 bits (82), Expect = 4e-04
Identities = 12/25 (48%), Positives = 15/25 (60%), Gaps = 1/25 (4%)
Query: 431 PFSCDVCGRKFARSDEKKRHA-KVH 454
P+ C +C R F R D RHA K+H
Sbjct: 1 PYPCGLCNRAFTRRDLLIRHAQKIH 25
Score = 32.9 bits (75), Expect = 0.003
Identities = 14/29 (48%), Positives = 19/29 (65%), Gaps = 3/29 (10%)
Query: 373 PYACPVENCDRRFSRSDELTRH-IRIHTG 400
PY C + C+R F+R D L RH +IH+G
Sbjct: 1 PYPCGL--CNRAFTRRDLLIRHAQKIHSG 27
Score = 31.3 bits (71), Expect = 0.015
Identities = 11/27 (40%), Positives = 17/27 (62%), Gaps = 1/27 (3%)
Query: 403 PFQCRICMRSFSRSDHLTTH-IRTHTG 428
P+ C +C R+F+R D L H + H+G
Sbjct: 1 PYPCGLCNRAFTRRDLLIRHAQKIHSG 27
>d2dmda3 g.37.1.1 (A:62-90) Zinc finger protein 64, ZFP68 {Human
(Homo sapiens) [TaxId: 9606]}
Length = 29
Score = 33.1 bits (75), Expect = 0.003
Identities = 13/29 (44%), Positives = 21/29 (72%)
Query: 401 QKPFQCRICMRSFSRSDHLTTHIRTHTGE 429
++PF+C+IC + S LT H+R+HTG+
Sbjct: 1 ERPFKCQICPYASRNSSQLTVHLRSHTGD 29
Score = 26.2 bits (57), Expect = 1.0
Identities = 13/30 (43%), Positives = 17/30 (56%), Gaps = 2/30 (6%)
Query: 371 ERPYACPVENCDRRFSRSDELTRHIRIHTG 400
ERP+ C + C S +LT H+R HTG
Sbjct: 1 ERPFKCQI--CPYASRNSSQLTVHLRSHTG 28
>d1bhia_ g.37.1.1 (A:) Transactivation domain of cre-bp1/atf-2
{Human (Homo sapiens) [TaxId: 9606]}
Length = 38
Score = 32.9 bits (75), Expect = 0.004
Identities = 9/29 (31%), Positives = 14/29 (48%)
Query: 371 ERPYACPVENCDRRFSRSDELTRHIRIHT 399
++P+ C C +RF+ D L H H
Sbjct: 4 DKPFLCTAPGCGQRFTNEDHLAVHKHKHE 32
Score = 27.1 bits (60), Expect = 0.49
Identities = 10/28 (35%), Positives = 13/28 (46%), Gaps = 2/28 (7%)
Query: 429 EKPFSCDV--CGRKFARSDEKKRHAKVH 454
+KPF C CG++F D H H
Sbjct: 4 DKPFLCTAPGCGQRFTNEDHLAVHKHKH 31
>d2epra1 g.37.1.1 (A:350-384) PATZ1 {Human (Homo sapiens) [TaxId:
9606]}
Length = 35
Score = 32.7 bits (74), Expect = 0.005
Identities = 14/33 (42%), Positives = 19/33 (57%)
Query: 401 QKPFQCRICMRSFSRSDHLTTHIRTHTGEKPFS 433
+K C IC + F HL H +H+GEKP+S
Sbjct: 3 RKQVACEICGKIFRDVYHLNRHKLSHSGEKPYS 35
Score = 24.6 bits (53), Expect = 3.5
Identities = 12/33 (36%), Positives = 17/33 (51%), Gaps = 2/33 (6%)
Query: 372 RPYACPVENCDRRFSRSDELTRHIRIHTGQKPF 404
+ AC E C + F L RH H+G+KP+
Sbjct: 4 KQVAC--EICGKIFRDVYHLNRHKLSHSGEKPY 34
>d2j7ja2 g.37.1.1 (A:29-57) Transcription factor IIIA, TFIIIA
{Xenopus laevis [TaxId: 8355]}
Length = 29
Score = 32.0 bits (72), Expect = 0.008
Identities = 14/28 (50%), Positives = 18/28 (64%)
Query: 371 ERPYACPVENCDRRFSRSDELTRHIRIH 398
+ PY CP E CD+RFS L RH ++H
Sbjct: 1 QLPYECPHEGCDKRFSLPSRLKRHEKVH 28
>d1tf3a2 g.37.1.1 (A:41-70) Transcription factor IIIA, TFIIIA
{Xenopus laevis [TaxId: 8355]}
Length = 30
Score = 31.6 bits (71), Expect = 0.012
Identities = 12/30 (40%), Positives = 18/30 (60%)
Query: 372 RPYACPVENCDRRFSRSDELTRHIRIHTGQ 401
+P+ C E C++ F+ LTRH HTG+
Sbjct: 1 KPFPCKEEGCEKGFTSLHHLTRHSLTHTGE 30
Score = 28.9 bits (64), Expect = 0.11
Identities = 15/30 (50%), Positives = 18/30 (60%), Gaps = 2/30 (6%)
Query: 402 KPFQCRI--CMRSFSRSDHLTTHIRTHTGE 429
KPF C+ C + F+ HLT H THTGE
Sbjct: 1 KPFPCKEEGCEKGFTSLHHLTRHSLTHTGE 30
>d2glia5 g.37.1.1 (A:229-257) Five-finger GLI1 {Human (Homo sapiens)
[TaxId: 9606]}
Length = 29
Score = 31.4 bits (71), Expect = 0.013
Identities = 8/29 (27%), Positives = 16/29 (55%)
Query: 372 RPYACPVENCDRRFSRSDELTRHIRIHTG 400
+PY C + C +R++ L +H++ G
Sbjct: 1 KPYVCKLPGCTKRYTDPSSLRKHVKTVHG 29
>d2csha2 g.37.1.1 (A:61-104) Zinc finger protein 297b {Human (Homo
sapiens) [TaxId: 9606]}
Length = 44
Score = 30.5 bits (68), Expect = 0.041
Identities = 10/24 (41%), Positives = 15/24 (62%)
Query: 427 TGEKPFSCDVCGRKFARSDEKKRH 450
TG KP+ C++C ++F D RH
Sbjct: 1 TGIKPYECNICAKRFMWRDSFHRH 24
Score = 25.5 bits (55), Expect = 2.4
Identities = 10/27 (37%), Positives = 15/27 (55%)
Query: 399 TGQKPFQCRICMRSFSRSDHLTTHIRT 425
TG KP++C IC + F D H+ +
Sbjct: 1 TGIKPYECNICAKRFMWRDSFHRHVTS 27
>d1njqa_ g.37.1.3 (A:) SUPERMAN zinc finger domain {Thale cress
(Arabidopsis thaliana) [TaxId: 3702]}
Length = 37
Score = 30.1 bits (68), Expect = 0.047
Identities = 7/30 (23%), Positives = 13/30 (43%)
Query: 401 QKPFQCRICMRSFSRSDHLTTHIRTHTGEK 430
+ + C C R F + L H+ H ++
Sbjct: 3 PRSYTCSFCKREFRSAQALGGHMNVHRRDR 32
Score = 26.6 bits (59), Expect = 0.80
Identities = 8/31 (25%), Positives = 16/31 (51%)
Query: 430 KPFSCDVCGRKFARSDEKKRHAKVHLKQRSK 460
+ ++C C R+F + H VH + R++
Sbjct: 4 RSYTCSFCKREFRSAQALGGHMNVHRRDRAR 34
>d2dlqa3 g.37.1.1 (A:63-92) GLI-Krueppel family member HKR3 {Mouse
(Mus musculus) [TaxId: 10090]}
Length = 30
Score = 29.3 bits (65), Expect = 0.067
Identities = 11/29 (37%), Positives = 17/29 (58%)
Query: 401 QKPFQCRICMRSFSRSDHLTTHIRTHTGE 429
++ F C +C +F R L H+ +HTGE
Sbjct: 2 EQVFTCSVCQETFRRRMELRLHMVSHTGE 30
>gi|89101013|ref|ZP_01173856.1|(9-416:430) adenylosuccinate lyase
[Bacillus sp. NRRL B-14911] gi|89084274|gb|EAR63432.1|
adenylosuccinate lyase [Bacillus sp. NRRL B-14911] E=0
s/c=1.85 id=87% cov=100%
Length = 408
Score = 32.9 bits (74), Expect = 0.085
Identities = 11/32 (34%), Positives = 19/32 (59%), Gaps = 3/32 (9%)
Query: 264 SPNNKYQ-WLDSPVEYSASIVQAQPGIIPKQE 294
+ N+++ WL+ VE A A+ G IPK++
Sbjct: 7 TEENRFKAWLE--VEILACEAWAELGDIPKED 36
>d2dlqa4 g.37.1.1 (A:8-34) GLI-Krueppel family member HKR3 {Mouse
(Mus musculus) [TaxId: 10090]}
Length = 27
Score = 28.9 bits (64), Expect = 0.093
Identities = 11/26 (42%), Positives = 14/26 (53%)
Query: 405 QCRICMRSFSRSDHLTTHIRTHTGEK 430
+C C + F +L H R HTGEK
Sbjct: 2 ECPTCHKKFLSKYYLKVHNRKHTGEK 27
>d1cp2a_ c.37.1.10 (A:) Nitrogenase iron protein {Clostridium
pasteurianum [TaxId: 1501]}
Length = 269
Score = 32.2 bits (72), Expect = 0.11
Identities = 16/66 (24%), Positives = 24/66 (36%), Gaps = 19/66 (28%)
Query: 29 ISNSGGDGKTTSFVNLSHPPTRSIPEYLILVEMPKLRVLKRPKGCSCIVDISPYLESLTG 88
I GG GK+T+ NL+ L M K ++ +V P +S
Sbjct: 6 IYGKGGIGKSTTTQNLT----------SGLHAMGK-TIM--------VVGCDPKADSTRL 46
Query: 89 TRGSLS 94
G L+
Sbjct: 47 LLGGLA 52
>d1c3ca_ a.127.1.1 (A:) Adenylosuccinate lyase {Thermotoga maritima
[TaxId: 2336]}
Length = 429
Score = 32.6 bits (73), Expect = 0.12
Identities = 10/32 (31%), Positives = 17/32 (53%), Gaps = 3/32 (9%)
Query: 264 SPNNKYQ-WLDSPVEYSASIVQAQPGIIPKQE 294
+ KY+ WL+ VE + + + G+IPK
Sbjct: 14 TEEAKYRRWLE--VELAVTRAYEELGMIPKGV 43
>d2glia4 g.37.1.1 (A:198-228) Five-finger GLI1 {Human (Homo sapiens)
[TaxId: 9606]}
Length = 31
Score = 27.6 bits (61), Expect = 0.28
Identities = 8/23 (34%), Positives = 13/23 (56%)
Query: 372 RPYACPVENCDRRFSRSDELTRH 394
+PY C E C + FS + + +H
Sbjct: 1 KPYMCEHEGCSKAFSNASDRAKH 23
>d2afhe1 c.37.1.10 (E:1-289) Nitrogenase iron protein {Azotobacter
vinelandii [TaxId: 354]}
Length = 289
Score = 31.0 bits (69), Expect = 0.33
Identities = 19/69 (27%), Positives = 26/69 (37%), Gaps = 19/69 (27%)
Query: 29 ISNSGGDGKTTSFVNLSHPPTRSIPEYLILVEMPKLRVLKRPKGCSCIVDISPYLESLTG 88
I GG GK+T+ NL L EM K +V+ IV P +S
Sbjct: 7 IYGKGGIGKSTTTQNLVA----------ALAEMGK-KVM--------IVGCDPKADSTRL 47
Query: 89 TRGSLSGNS 97
S + N+
Sbjct: 48 ILHSKAQNT 56
>d2drpa2 g.37.1.1 (A:140-165) Tramtrack protein (two zinc-finger
peptide) {Drosophila melanogaster [TaxId: 7227]}
Length = 26
Score = 27.3 bits (60), Expect = 0.37
Identities = 10/24 (41%), Positives = 15/24 (62%), Gaps = 2/24 (8%)
Query: 374 YACPVENCDRRFSRSDELTRHIRI 397
Y CP C + F+R D +T H++I
Sbjct: 2 YPCPF--CFKEFTRKDNMTAHVKI 23
Score = 26.9 bits (59), Expect = 0.45
Identities = 7/21 (33%), Positives = 14/21 (66%)
Query: 404 FQCRICMRSFSRSDHLTTHIR 424
+ C C + F+R D++T H++
Sbjct: 2 YPCPFCFKEFTRKDNMTAHVK 22
>d1i4da_ a.238.1.2 (A:) Arfaptin, Rac-binding fragment {Human (Homo
sapiens) [TaxId: 9606]}
Length = 200
Score = 30.1 bits (67), Expect = 0.42
Identities = 5/51 (9%), Positives = 17/51 (33%)
Query: 439 RKFARSDEKKRHAKVHLKQRSKKESKMAVMMSQQQAQQQQQQNHVHQQQQH 489
+++ + + + L++ S + AQ Q + ++
Sbjct: 108 KQYEAARLEYDAYRTDLEELSLGPRDAGTRGRLESAQATFQAHRDKYEKLR 158
>d1ny8a_ d.52.6.1 (A:) Hypothetical protein YrbA {Escherichia coli
[TaxId: 562]}
Length = 97
Score = 28.6 bits (64), Expect = 0.44
Identities = 14/76 (18%), Positives = 24/76 (31%), Gaps = 2/76 (2%)
Query: 421 THIRTHTGEKPFSCDVCGRKFARSDEKKRHAKVH--LKQRSKKESKMAVMMSQQQAQQQQ 478
+ F G F K+ V+ L + AV + +
Sbjct: 22 QEVHVSGDGSHFQVIAVGELFDGMSRVKKQQTVYGPLMEYIADNRIHAVSIKAYTPAEWA 81
Query: 479 QQNHVHQQQQHHHHHH 494
+ ++ +HHHHHH
Sbjct: 82 RDRKLNGFLEHHHHHH 97
>d1ihua1 c.37.1.10 (A:1-296) Arsenite-translocating ATPase ArsA
{Escherichia coli [TaxId: 562]}
Length = 296
Score = 30.3 bits (67), Expect = 0.45
Identities = 10/33 (30%), Positives = 14/33 (42%), Gaps = 4/33 (12%)
Query: 14 NFLSQIPAWLPGADQISNSGGDGKTTSFVNLSH 46
FL IP +L + GG GKT+ +
Sbjct: 2 QFLQNIPPYL----FFTGKGGVGKTSISCATAI 30
>d1ubdc2 g.37.1.1 (C:323-350) Ying-yang 1 (yy1, zinc finger domain)
{Human (Homo sapiens) [TaxId: 9606]}
Length = 28
Score = 26.5 bits (58), Expect = 0.60
Identities = 10/21 (47%), Positives = 12/21 (57%)
Query: 434 CDVCGRKFARSDEKKRHAKVH 454
C CG+ F S + KRH VH
Sbjct: 5 CAECGKAFVESSKLKRHQLVH 25
Score = 25.4 bits (55), Expect = 2.0
Identities = 9/21 (42%), Positives = 13/21 (61%)
Query: 381 CDRRFSRSDELTRHIRIHTGQ 401
C + F S +L RH +HTG+
Sbjct: 8 CGKAFVESSKLKRHQLVHTGE 28
Score = 24.6 bits (53), Expect = 2.8
Identities = 10/24 (41%), Positives = 12/24 (50%)
Query: 406 CRICMRSFSRSDHLTTHIRTHTGE 429
C C ++F S L H HTGE
Sbjct: 5 CAECGKAFVESSKLKRHQLVHTGE 28
>d2j7ja1 g.37.1.1 (A:1-28) Transcription factor IIIA, TFIIIA
{Xenopus laevis [TaxId: 8355]}
Length = 28
Score = 26.6 bits (58), Expect = 0.71
Identities = 10/26 (38%), Positives = 14/26 (53%)
Query: 374 YACPVENCDRRFSRSDELTRHIRIHT 399
Y C ENC + F + ++L H HT
Sbjct: 2 YVCHFENCGKAFKKHNQLKVHQFSHT 27
>d2crua1 a.5.6.1 (A:8-112) Programmed cell death protein 5 {Human
(Homo sapiens) [TaxId: 9606]}
Length = 105
Score = 28.1 bits (63), Expect = 0.83
Identities = 2/28 (7%), Positives = 10/28 (35%)
Query: 461 KESKMAVMMSQQQAQQQQQQNHVHQQQQ 488
+ ++A + ++ Q ++
Sbjct: 2 RRQRLAELQAKHGDPGDAAQQEAKHREA 29
>d1bboa1 g.37.1.1 (A:1-28) Enhancer binding protein {Human (Homo
sapiens) [TaxId: 9606]}
Length = 28
Score = 26.0 bits (57), Expect = 0.87
Identities = 10/29 (34%), Positives = 13/29 (44%), Gaps = 2/29 (6%)
Query: 374 YACPVENCDRRFSRSDELTRHIRIHTGQK 402
Y C C R + L +HIR HT +
Sbjct: 2 YICE--ECGIRAKKPSMLKKHIRTHTDVR 28
Score = 26.0 bits (57), Expect = 1.0
Identities = 9/25 (36%), Positives = 11/25 (44%)
Query: 406 CRICMRSFSRSDHLTTHIRTHTGEK 430
C C + L HIRTHT +
Sbjct: 4 CEECGIRAKKPSMLKKHIRTHTDVR 28
>d1kdga1 c.3.1.2 (A:215-512,A:694-755) Flavoprotein domain of
flavocytochrome cellobiose dehydrogenase (CDH),
FAD-binding domain {Fungus (Phanerochaete chrysosporium)
[TaxId: 5306]}
Length = 360
Score = 29.2 bits (64), Expect = 1.2
Identities = 19/92 (20%), Positives = 34/92 (36%), Gaps = 4/92 (4%)
Query: 234 CGALKQPSSSYSSCSGEQDV--YARVNQSLMHSPNNKYQWLDSPVEYSASIVQAQPGIIP 291
GA + S G D+ + N + + + QW++ PV + Q ++
Sbjct: 252 AGAFGTSRILFQSGIGPTDMIQTVQSNPTAAAALPPQNQWINLPVGMTTIGSSPQSAVVD 311
Query: 292 KQEPVYGNTNL--SGCGSLVNLSDPNNPGSSY 321
V+G NL G + +L N G+
Sbjct: 312 SNVKVFGTNNLFIVDAGIIPHLPTGNPQGTLM 343
>d1f5na1 a.114.1.1 (A:284-583) Interferon-induced guanylate-binding
protein 1 (GBP1), C-terminal domain {Human (Homo
sapiens) [TaxId: 9606]}
Length = 300
Score = 28.9 bits (64), Expect = 1.5
Identities = 6/43 (13%), Positives = 17/43 (39%)
Query: 446 EKKRHAKVHLKQRSKKESKMAVMMSQQQAQQQQQQNHVHQQQQ 488
++ + + + + KM Q +Q++ Q+Q+
Sbjct: 233 MMEQKERSYQEHLKQLTEKMENDRVQLLKEQERTLALKLQEQE 275
>d2glia2 g.37.1.1 (A:135-167) Five-finger GLI1 {Human (Homo sapiens)
[TaxId: 9606]}
Length = 33
Score = 25.5 bits (56), Expect = 1.6
Identities = 7/11 (63%), Positives = 8/11 (72%)
Query: 419 LTTHIRTHTGE 429
L H+R HTGE
Sbjct: 23 LVVHMRRHTGE 33
>d1klra_ g.37.1.1 (A:) ZFY {Human (Homo sapiens) [TaxId: 9606]}
Length = 30
Score = 25.5 bits (55), Expect = 1.8
Identities = 13/30 (43%), Positives = 19/30 (63%), Gaps = 1/30 (3%)
Query: 402 KPFQCRICMRSFSRSDHLTTHIRT-HTGEK 430
K +QC+ C + S +L THI+T H+ EK
Sbjct: 1 KTYQCQYCEFRSADSSNLKTHIKTKHSKEK 30
>d1yuza2 g.41.5.1 (A:167-202) Nigerythrin, C-terminal domain
{Desulfovibrio vulgaris [TaxId: 881]}
Length = 36
Score = 24.6 bits (54), Expect = 3.1
Identities = 9/38 (23%), Positives = 11/38 (28%), Gaps = 13/38 (34%)
Query: 401 QKPFQCRICMRSFSRSDHLTTHIRTHTGEKPFSCDVCG 438
K C IC + H GE C +C
Sbjct: 3 DKFHLCPIC-------GY------IHKGEDFEKCPICF 27
>d1qwza_ b.100.1.1 (A:) Sortase B {Staphylococcus aureus [TaxId:
1280]}
Length = 235
Score = 27.6 bits (61), Expect = 3.1
Identities = 9/9 (100%), Positives = 9/9 (100%)
Query: 489 HHHHHHHHH 497
HHHHHHHHH
Sbjct: 2 HHHHHHHHH 10
Score = 27.2 bits (60), Expect = 4.6
Identities = 9/9 (100%), Positives = 9/9 (100%)
Query: 489 HHHHHHHHH 497
HHHHHHHHH
Sbjct: 3 HHHHHHHHH 11
>d1znfa_ g.37.1.1 (A:) XFIN, third domain {Xenopus laevis [TaxId:
8355]}
Length = 26
Score = 24.3 bits (52), Expect = 3.5
Identities = 9/23 (39%), Positives = 13/23 (56%)
Query: 404 FQCRICMRSFSRSDHLTTHIRTH 426
++C +C RSF L+ H R H
Sbjct: 1 YKCGLCERSFVEKSALSRHQRVH 23
Score = 23.5 bits (50), Expect = 6.7
Identities = 8/23 (34%), Positives = 11/23 (47%)
Query: 432 FSCDVCGRKFARSDEKKRHAKVH 454
+ C +C R F RH +VH
Sbjct: 1 YKCGLCERSFVEKSALSRHQRVH 23
Score = 23.2 bits (49), Expect = 9.0
Identities = 10/25 (40%), Positives = 14/25 (56%), Gaps = 2/25 (8%)
Query: 374 YACPVENCDRRFSRSDELTRHIRIH 398
Y C + C+R F L+RH R+H
Sbjct: 1 YKCGL--CERSFVEKSALSRHQRVH 23
>d1x6ha1 g.37.1.1 (A:44-80) Transcriptional repressor CTCF {Human
(Homo sapiens) [TaxId: 9606]}
Length = 37
Score = 24.7 bits (53), Expect = 3.5
Identities = 9/21 (42%), Positives = 11/21 (52%)
Query: 432 FSCDVCGRKFARSDEKKRHAK 452
F C CG+ F R + RHA
Sbjct: 5 FVCSKCGKTFTRRNTMARHAD 25
>d1orna_ a.96.1.1 (A:) Endonuclease III {Escherichia coli [TaxId:
562]}
Length = 214
Score = 27.2 bits (59), Expect = 4.0
Identities = 10/60 (16%), Positives = 21/60 (35%)
Query: 450 HAKVHLKQRSKKESKMAVMMSQQQAQQQQQQNHVHQQQQHHHHHHHHHPNMEGMPVVTTP 509
A L R+ E +AV++S Q + +++ H + +E +
Sbjct: 20 DAHCELVHRNPFELLIAVVLSAQCTDALVNKVTKRLFEKYRTPHDYIAVPLEELEQDIRS 79
>d1a4fa_ a.1.1.2 (A:) Hemoglobin, alpha-chain {Bar-headed goose
(Anser indicus) [TaxId: 8846]}
Length = 141
Score = 26.6 bits (58), Expect = 4.1
Identities = 8/76 (10%), Positives = 16/76 (21%), Gaps = 3/76 (3%)
Query: 438 GRKFARSDEKKR---HAKVHLKQRSKKESKMAVMMSQQQAQQQQQQNHVHQQQQHHHHHH 494
R F + K H + K V+ + +A + H
Sbjct: 30 ERMFTAYPQTKTYFPHFDLQHGSAQIKAHGKKVVAALVEAVNHIDDIAGALSKLSDLHAQ 89
Query: 495 HHHPNMEGMPVVTTPL 510
+ +
Sbjct: 90 KLRVDPVNFKFLGHCF 105
>d1gcva_ a.1.1.2 (A:) Hemoglobin, alpha-chain {Houndshark (Mustelus
griseus) [TaxId: 89020]}
Length = 140
Score = 26.6 bits (58), Expect = 4.2
Identities = 11/97 (11%), Positives = 25/97 (25%), Gaps = 9/97 (9%)
Query: 417 DHLTTHIRTHTGEKPFSCDVCGRKFARSDEKKR---HAKVHLKQRSKKESKMAVMMSQQQ 473
L + E R F K + + V+ + +
Sbjct: 15 QVLAKSPEAYGAE------CLARLFVTHPGSKSYFEYKDYSAAGAKVQVHGGKVIRAVVK 68
Query: 474 AQQQQQQNHVHQQQQHHHHHHHHHPNMEGMPVVTTPL 510
A + H H + H + + P+++ +
Sbjct: 69 AAEHVDDLHSHLETLALTHGKKLLVDPQNFPMLSECI 105
>d1outa_ a.1.1.2 (A:) Hemoglobin, alpha-chain {Trout (Oncorhynchus
mykiss) [TaxId: 8022]}
Length = 142
Score = 26.5 bits (58), Expect = 4.7
Identities = 7/77 (9%), Positives = 17/77 (22%), Gaps = 4/77 (5%)
Query: 438 GRKFARSDEKKR---HAKVHLKQRSKKESK-MAVMMSQQQAQQQQQQNHVHQQQQHHHHH 493
GR + K H + +M + +A H
Sbjct: 30 GRMLTAYPQTKTYFSHWADLSPGSGPVKKHGGIIMGAIGKAVGLMDDLVGGMSALSDLHA 89
Query: 494 HHHHPNMEGMPVVTTPL 510
+ +++ +
Sbjct: 90 FKLRVDPGNFKILSHNI 106
>d2i6ha1 a.118.8.5 (A:1-179) Hypothetical protein Atu0120
{Agrobacterium tumefaciens [TaxId: 358]}
Length = 179
Score = 26.9 bits (59), Expect = 4.8
Identities = 14/90 (15%), Positives = 31/90 (34%), Gaps = 8/90 (8%)
Query: 408 ICMRSFSRSDHLTTHIRTHTGEKPFSCDVCGRKFARSDEKKRHAKVHLKQRSKKESKMAV 467
+ + F R+ T ++ D R FA ++ H + + + + +
Sbjct: 66 LLLDQFPRNCFRGTA-------HMYATDPLARFFADEAIRRGHDQ-AVSEDLRVFFYLPF 117
Query: 468 MMSQQQAQQQQQQNHVHQQQQHHHHHHHHH 497
++ A QQ+ + + HH H
Sbjct: 118 SHAEDIAAQQRACDLNQPLGGLYLHHAEEH 147
>d1g3qa_ c.37.1.10 (A:) Cell division regulator MinD {Archaeon
Pyrococcus furiosus [TaxId: 2261]}
Length = 237
Score = 27.0 bits (58), Expect = 5.5
Identities = 10/18 (55%), Positives = 11/18 (61%)
Query: 29 ISNSGGDGKTTSFVNLSH 46
+S GG GKTT NLS
Sbjct: 8 VSGKGGTGKTTVTANLSV 25
>d1wila_ g.50.1.3 (A:) Hypothetical protein KIAA1045 {Human (Homo
sapiens) [TaxId: 9606]}
Length = 89
Score = 25.7 bits (56), Expect = 5.7
Identities = 9/26 (34%), Positives = 14/26 (53%)
Query: 388 SDELTRHIRIHTGQKPFQCRICMRSF 413
+DE+ + T + F CR+C R F
Sbjct: 14 NDEMCDVCEVWTAESLFPCRVCTRVF 39
>d2abka_ a.96.1.1 (A:) Endonuclease III {Escherichia coli [TaxId:
562]}
Length = 211
Score = 26.8 bits (58), Expect = 5.7
Identities = 12/63 (19%), Positives = 19/63 (30%)
Query: 441 FARSDEKKRHAKVHLKQRSKKESKMAVMMSQQQAQQQQQQNHVHQQQQHHHHHHHHHPNM 500
R E H L S E +AV++S Q + + +
Sbjct: 10 LTRLRENNPHPTTELNFSSPFELLIAVLLSAQATDVSVNKATAKLYPVANTPAAMLELGV 69
Query: 501 EGM 503
EG+
Sbjct: 70 EGV 72
>d2dmda1 g.37.1.1 (A:34-61) Zinc finger protein 64, ZFP68 {Human
(Homo sapiens) [TaxId: 9606]}
Length = 28
Score = 23.6 bits (50), Expect = 6.9
Identities = 9/26 (34%), Positives = 16/26 (61%)
Query: 402 KPFQCRICMRSFSRSDHLTTHIRTHT 427
KP++C+ C + + S L H+R H+
Sbjct: 2 KPYKCKTCDYAAADSSSLNKHLRIHS 27
>d1vkma_ c.138.1.1 (A:) Hypothetical protein TM1464 {Thermotoga
maritima [TaxId: 2336]}
Length = 292
Score = 26.8 bits (59), Expect = 7.2
Identities = 10/20 (50%), Positives = 11/20 (55%), Gaps = 5/20 (25%)
Query: 492 HHHHHHPN-----MEGMPVV 506
HHHHHH +G PVV
Sbjct: 3 HHHHHHVIIESRIEKGKPVV 22
>d2a9ua1 a.118.23.1 (A:6-139) Ubiquitin carboxyl-terminal hydrolase
8, USH8 {Human (Homo sapiens) [TaxId: 9606]}
Length = 134
Score = 26.0 bits (57), Expect = 7.5
Identities = 10/79 (12%), Positives = 29/79 (36%), Gaps = 3/79 (3%)
Query: 410 MRSFSRSDHLTTHIRTHTGEKPFSCDVCGRKFARSDEKKRHAKVHLKQRSKKESKMAVMM 469
M+ + + + + F + ++ E+ LK R ++
Sbjct: 59 MKYVTVYNLIKKRPDFKQQQDYFHSILGPGNIKKAVEEAERLSESLKLRYEEAEV--RKK 116
Query: 470 SQQQAQQQQQQNHVHQQQQ 488
+++ +Q++ Q Q++Q
Sbjct: 117 LEEKDRQEEAQRL-QQKRQ 134
>d1hyqa_ c.37.1.10 (A:) Cell division regulator MinD {Archaeon
Archaeoglobus fulgidus [TaxId: 2234]}
Length = 232
Score = 26.3 bits (56), Expect = 8.2
Identities = 9/18 (50%), Positives = 9/18 (50%)
Query: 29 ISNSGGDGKTTSFVNLSH 46
S GG GKTT NL
Sbjct: 7 ASGKGGTGKTTITANLGV 24
>d1x5wa2 g.37.1.1 (A:36-64) Zinc finger protein 64, ZFP68 {Human
(Homo sapiens) [TaxId: 9606]}
Length = 29
Score = 23.4 bits (50), Expect = 9.6
Identities = 7/28 (25%), Positives = 15/28 (53%)
Query: 402 KPFQCRICMRSFSRSDHLTTHIRTHTGE 429
+PF+C C + +L+ H++ G+
Sbjct: 1 RPFKCNYCSFDTKQPSNLSKHMKKFHGD 28
Database: scop70_1_75
Posted date: Mar 27, 2010 6:21 PM
Number of letters in database: 2,407,596
Number of sequences in database: 13,730
Lambda K H
0.312 0.128 0.386
Gapped
Lambda K H
0.267 0.0643 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 13730
Number of Hits to DB: 1,843,002
Number of extensions: 82714
Number of successful extensions: 671
Number of sequences better than 10.0: 1
Number of HSP's gapped: 638
Number of HSP's successfully gapped: 145
Length of query: 510
Length of database: 2,407,596
Length adjustment: 89
Effective length of query: 421
Effective length of database: 1,185,626
Effective search space: 499148546
Effective search space used: 499148546
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)
S2: 55 (25.1 bits)