BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy6791
(293 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9D8S9|BOLA1_MOUSE BolA-like protein 1 OS=Mus musculus GN=Bola1 PE=1 SV=1
Length = 137
Score = 37.0 bits (84), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 19/52 (36%), Positives = 31/52 (59%), Gaps = 6/52 (11%)
Query: 114 KLHIVSRLFQNKTKDERHAMVHEALRDEMLKREAGC--AIDIHADTPEEWND 163
++ +VS F+ + +RH +VHEAL +E+ AG A+ I A TP +W +
Sbjct: 69 RVAVVSSRFEGMSPLQRHRLVHEALSEEL----AGPVHALAIQAKTPAQWRE 116
>sp|Q4UNH3|DSB_RICFE Putative protein-disulfide oxidoreductase RF_0032 OS=Rickettsia
felis (strain ATCC VR-1525 / URRWXCal2) GN=RF_0032 PE=3
SV=1
Length = 278
Score = 36.6 bits (83), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 28/101 (27%), Positives = 43/101 (42%), Gaps = 7/101 (6%)
Query: 123 QNKTKDERHAMVHEALRDEMLKREAGCAIDIHADTPEEWNDFRANNDFDEISGKPDLRLR 182
QNK ++E+ +V E L++ +E + E NN DE+S P +
Sbjct: 23 QNKNQEEKQIIVQETLQNNNTSQEINQEAVNSENAAESIVPANDNNQTDEVSTPPSQEQK 82
Query: 183 AAKTTPVSV------KDVKLRDKIYNYI-AKHFSPTVLHVV 216
+ PV V D+ L +K N I ++FSPT H
Sbjct: 83 NPEIKPVKVTFKVDDNDMVLGNKKSNVIVVEYFSPTCPHCA 123
>sp|Q86KD0|Y7416_DICDI BolA-like protein DDB_G0274169 OS=Dictyostelium discoideum
GN=DDB_G0274169 PE=3 SV=1
Length = 114
Score = 36.2 bits (82), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 18/69 (26%), Positives = 38/69 (55%), Gaps = 1/69 (1%)
Query: 196 LRDKIYNYIAKHFSPTVLHVVDSKKMHPIDNDNPA-FDVLIVSNHFNNLTITQRTMLMHD 254
+ ++I + K +P L +++ MH + + + F V IVS F L++ ++ L+++
Sbjct: 7 IENEIKELLTKELNPINLEIINESYMHNVPKGSESHFKVKIVSEKFETLSMIEQHRLVNE 66
Query: 255 YLRDFINEG 263
L++FI G
Sbjct: 67 ILKNFIGNG 75
Score = 32.0 bits (71), Expect = 5.9, Method: Compositional matrix adjust.
Identities = 28/101 (27%), Positives = 50/101 (49%), Gaps = 6/101 (5%)
Query: 76 PIMRKLKAVNFTIEMNYEQIRFVEKYYMDHVDYWPLC-VKLHIVSRLFQNKTKDERHAMV 134
PI ++K + T E+N + + + YM +V K+ IVS F+ + E+H +V
Sbjct: 6 PIENEIKEL-LTKELNPINLEIINESYMHNVPKGSESHFKVKIVSEKFETLSMIEQHRLV 64
Query: 135 HEALRDEMLKREAGCAIDIHADTPEEW---NDFRANNDFDE 172
+E L++ + A+ I + TP +W N + N D D+
Sbjct: 65 NEILKN-FIGNGKIHALSITSRTPTQWKKNNQTKINVDDDK 104
>sp|Q89AA2|Y418_BUCBP Uncharacterized protein bbp_418 OS=Buchnera aphidicola subsp.
Baizongia pistaciae (strain Bp) GN=bbp_418 PE=3 SV=1
Length = 105
Score = 35.0 bits (79), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 34/65 (52%), Gaps = 1/65 (1%)
Query: 196 LRDKIYNYIAKHFSPTVLHVVDSKKMHPID-NDNPAFDVLIVSNHFNNLTITQRTMLMHD 254
++ KI N + K + L + + K H I N N F +LIVSN+F N+ I R ++
Sbjct: 2 IKQKIINLLQKKINYEKLKIYNESKKHNITHNKNSHFKILIVSNYFINIDIIDRHRKIYS 61
Query: 255 YLRDF 259
+L F
Sbjct: 62 WLSIF 66
>sp|Q3T138|BOLA1_BOVIN BolA-like protein 1 OS=Bos taurus GN=BOLA1 PE=2 SV=1
Length = 135
Score = 34.7 bits (78), Expect = 0.77, Method: Compositional matrix adjust.
Identities = 18/52 (34%), Positives = 30/52 (57%), Gaps = 6/52 (11%)
Query: 114 KLHIVSRLFQNKTKDERHAMVHEALRDEMLKREAGC--AIDIHADTPEEWND 163
++ +VS F+ + +RH +VH AL +E+ AG A+ I A TP +W +
Sbjct: 69 RVAVVSSRFEGLSPLQRHRLVHAALSEEL----AGPVHALAIQARTPAQWKE 116
>sp|Q3E793|YA044_YEAST Uncharacterized bolA-like protein YAL044W-A OS=Saccharomyces
cerevisiae (strain ATCC 204508 / S288c) GN=YAL044W-A
PE=1 SV=1
Length = 110
Score = 33.5 bits (75), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 15/48 (31%), Positives = 28/48 (58%)
Query: 114 KLHIVSRLFQNKTKDERHAMVHEALRDEMLKREAGCAIDIHADTPEEW 161
++ +VS+ F+ +RH MV+ L+DEM + A+ + TP+E+
Sbjct: 58 RIEMVSKKFEGLKLPQRHRMVYSLLQDEMAQANGIHALQLSLKTPQEY 105
>sp|Q84W65|SUFE_ARATH SufE-like protein, chloroplastic OS=Arabidopsis thaliana GN=EMB1374
PE=1 SV=2
Length = 371
Score = 33.1 bits (74), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 19/47 (40%), Positives = 30/47 (63%), Gaps = 4/47 (8%)
Query: 115 LHIVSRLFQNKTKDERHAMVHEALRDEMLKREAGC-AIDIHADTPEE 160
L IVS FQ K+ +RH ++++ L+DE+ ++G A+ I A TP E
Sbjct: 327 LRIVSDAFQGKSLVKRHRLIYDLLQDEL---KSGLHALSIVAKTPAE 370
>sp|P73055|Y3122_SYNY3 Uncharacterized protein ssr3122 OS=Synechocystis sp. (strain PCC
6803 / Kazusa) GN=ssr3122 PE=3 SV=1
Length = 85
Score = 33.1 bits (74), Expect = 2.8, Method: Composition-based stats.
Identities = 17/45 (37%), Positives = 27/45 (60%), Gaps = 1/45 (2%)
Query: 117 IVSRLFQNKTKDERHAMVHEALRDEMLKREAGCAIDIHADTPEEW 161
+VS F +++ ++H MV+ AL+D L EA A+ + TPE W
Sbjct: 35 VVSSAFTGQSRVKQHQMVYGALKDA-LASEAIHALALKTFTPEAW 78
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.323 0.139 0.421
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 116,318,151
Number of Sequences: 539616
Number of extensions: 4974374
Number of successful extensions: 10464
Number of sequences better than 100.0: 23
Number of HSP's better than 100.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 19
Number of HSP's that attempted gapping in prelim test: 10454
Number of HSP's gapped (non-prelim): 28
length of query: 293
length of database: 191,569,459
effective HSP length: 116
effective length of query: 177
effective length of database: 128,974,003
effective search space: 22828398531
effective search space used: 22828398531
T: 11
A: 40
X1: 16 ( 7.5 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 61 (28.1 bits)