RPS-BLAST 2.2.26 [Sep-21-2011]
Database: scop70_1_75
13,730 sequences; 2,407,596 total letters
Searching..................................................done
Query= psy6801
(228 letters)
>d2ak3a1 c.37.1.1 (A:0-124,A:162-225) Adenylate kinase {Cow (Bos
taurus), mitochondrial izozyme-3 [TaxId: 9913]}
Length = 189
Score = 115 bits (288), Expect = 9e-33
Identities = 80/216 (37%), Positives = 127/216 (58%), Gaps = 39/216 (18%)
Query: 7 MLKAVIIGAPGCGKGTISSRIIDHFNVKHIATGDILRSHIAQNTTLGLKAKEYMNKGLLV 66
+L+A I+GAPG GKGT+SSRI HF +KH+++GD+LR ++ + T +G+ AK ++++G L+
Sbjct: 6 LLRAAIMGAPGSGKGTVSSRITKHFELKHLSSGDLLRDNMLRGTEIGVLAKTFIDQGKLI 65
Query: 67 PDDLMIDLVKNEVK-DLKCNYLLDGFPRTYDQAMALFKNHLSPNCVMHINVPKEVIIDRL 125
PDD+M LV +E+K + N+LLDGFPRT QA AL + + + V+++NVP EVI RL
Sbjct: 66 PDDVMTRLVLHELKNLTQYNWLLDGFPRTLPQAEALDRAY-QIDTVINLNVPFEVIKQRL 124
Query: 126 SKRWIHPASGRVYNLDFNAPKKPGIDDITGEKLIQRDDDKPEAIKKRLETFDQTIKPLLD 185
+ R E + KRL+ ++ +P+L+
Sbjct: 125 TDRP-------------------------------------ETVVKRLKAYEAQTEPVLE 147
Query: 186 YYDNREVLDTFTGNTTDEIWPRIYEHLNIRIPPLKR 221
YY + VL+TF+G T++IWP +Y L ++P +
Sbjct: 148 YYRKKGVLETFSGTETNKIWPHVYAFLQTKLPQRSQ 183
>d1s3ga1 c.37.1.1 (A:1-125,A:161-217) Adenylate kinase {Bacillus
globisporus [TaxId: 1459]}
Length = 182
Score = 106 bits (265), Expect = 2e-29
Identities = 62/208 (29%), Positives = 98/208 (47%), Gaps = 34/208 (16%)
Query: 8 LKAVIIGAPGCGKGTISSRIIDHFNVKHIATGDILRSHIAQNTTLGLKAKEYMNKGLLVP 67
+ V++G PG GKGT + RI++ + HI+TGD+ R+ I + T LG+KAK +M++G LVP
Sbjct: 1 MNIVLMGLPGAGKGTQADRIVEKYGTPHISTGDMFRAAIQEGTELGVKAKSFMDQGALVP 60
Query: 68 DDLMIDLVKNEVKDLKCN--YLLDGFPRTYDQAMALFKNHLSPNCVMHINVPKEVIIDRL 125
D++ I +V+ + C+ +LLDGFPRT QA AL + + + +V + L
Sbjct: 61 DEVTIGIVRERLSKSDCDNGFLLDGFPRTVPQAEALDQLLADMGRKIEHVLNIQVEKEEL 120
Query: 126 SKRWIHPASGRVYNLDFNAPKKPGIDDITGEKLIQRDDDKPEAIKKRLETFDQTIKPLLD 185
R D P+ + RLE PLL
Sbjct: 121 IARLTAD-------------------------------DNPDTVTNRLEVNMNQTAPLLA 149
Query: 186 YYDNREVLDTFTGNTT-DEIWPRIYEHL 212
+YD++EVL G +++ + L
Sbjct: 150 FYDSKEVLVNINGQKDIKDVFKDLDVIL 177
>d1zina1 c.37.1.1 (A:1-125,A:161-217) Adenylate kinase {Bacillus
stearothermophilus [TaxId: 1422]}
Length = 182
Score = 101 bits (251), Expect = 2e-27
Identities = 60/209 (28%), Positives = 98/209 (46%), Gaps = 34/209 (16%)
Query: 8 LKAVIIGAPGCGKGTISSRIIDHFNVKHIATGDILRSHIAQNTTLGLKAKEYMNKGLLVP 67
+ V++G PG GKGT + +I+ + + HI+TGD+ R+ + + T LGL+AK+YM++G LVP
Sbjct: 1 MNLVLMGLPGAGKGTQAEKIVAAYGIPHISTGDMFRAAMKEGTPLGLQAKQYMDRGDLVP 60
Query: 68 DDLMIDLVKNEV--KDLKCNYLLDGFPRTYDQAMALFKNHLSPNCVMHINVPKEVIIDRL 125
D++ I +V+ + D + +LLDGFPRT QA AL + + +V D
Sbjct: 61 DEVTIGIVRERLSKDDCQNGFLLDGFPRTVAQAEALETMLADIGRKLDYVIHIDVRQDV- 119
Query: 126 SKRWIHPASGRVYNLDFNAPKKPGIDDITGEKLIQRDDDKPEAIKKRLETFDQTIKPLLD 185
DD + RLE + +KPL+D
Sbjct: 120 ------------------------------LMERLTADDNEATVANRLEVNMKQMKPLVD 149
Query: 186 YYDNREVLDTFTGN-TTDEIWPRIYEHLN 213
+Y+ + L G ++++ I E L
Sbjct: 150 FYEQKGYLRNINGEQDMEKVFADIRELLG 178
>d2cdna1 c.37.1.1 (A:1-181) Adenylate kinase {Mycobacterium
tuberculosis [TaxId: 1773]}
Length = 181
Score = 100 bits (249), Expect = 5e-27
Identities = 61/213 (28%), Positives = 103/213 (48%), Gaps = 40/213 (18%)
Query: 8 LKAVIIGAPGCGKGTISSRIIDHFNVKHIATGDILRSHIAQNTTLGLKAKEYMNKGLLVP 67
++ +++G PG GKGT + ++ + + I+TG++ R +I + T LG++AK Y++ G LVP
Sbjct: 1 MRVLLLGPPGAGKGTQAVKLAEKLGIPQISTGELFRRNIEEGTKLGVEAKRYLDAGDLVP 60
Query: 68 DDLMIDLVKNEV--KDLKCNYLLDGFPRTYDQAMALFKNH----LSPNCVMHINVPKEVI 121
DL +LV + + D ++LDG+PR+ +QA AL + + V+ V +EV+
Sbjct: 61 SDLTNELVDDRLNNPDAANGFILDGYPRSVEQAKALHEMLERRGTDIDAVLEFRVSEEVL 120
Query: 122 IDRLSKRWIHPASGRVYNLDFNAPKKPGIDDITGEKLIQRDDDKPEAIKKRLETFDQTIK 181
++RL R R DD + I R++ +
Sbjct: 121 LERLKGRG-------------------------------RADDTDDVILNRMKVYRDETA 149
Query: 182 PLLDYYDNREVLDTFTGN-TTDEIWPRIYEHLN 213
PLL+YY R+ L T T DE++ R L
Sbjct: 150 PLLEYY--RDQLKTVDAVGTMDEVFARALRALG 180
>d3adka_ c.37.1.1 (A:) Adenylate kinase {Pig (Sus scrofa) [TaxId:
9823]}
Length = 194
Score = 100 bits (249), Expect = 5e-27
Identities = 53/207 (25%), Positives = 99/207 (47%), Gaps = 31/207 (14%)
Query: 11 VIIGAPGCGKGTISSRIIDHFNVKHIATGDILRSHIAQNTTLGLKAKEYMNKGLLVPDDL 70
++G PG GKGT +I+ + H++TGD+LR+ ++ + G E M KG LVP +
Sbjct: 12 FVVGGPGSGKGTQCEKIVQKYGYTHLSTGDLLRAEVSSGSARGKMLSEIMEKGQLVPLET 71
Query: 71 MIDLVKNEV---KDLKCNYLLDGFPRTYDQAMALFKNHLSPNCVMHINVPKEVIIDRLSK 127
++D++++ + D +L+DG+PR Q + P +++++ E + RL K
Sbjct: 72 VLDMLRDAMVAKVDTSKGFLIDGYPREVKQGEEFERKIGQPTLLLYVDAGPETMTKRLLK 131
Query: 128 RWIHPASGRVYNLDFNAPKKPGIDDITGEKLIQRDDDKPEAIKKRLETFDQTIKPLLDYY 187
R R DD E IKKRLET+ + +P++ +Y
Sbjct: 132 RGETS---------------------------GRVDDNEETIKKRLETYYKATEPVIAFY 164
Query: 188 DNREVLDTFTGN-TTDEIWPRIYEHLN 213
+ R ++ + D+++ ++ HL+
Sbjct: 165 EKRGIVRKVNAEGSVDDVFSQVCTHLD 191
>d1ukza_ c.37.1.1 (A:) Uridylate kinase {Baker's yeast
(Saccharomyces cerevisiae) [TaxId: 4932]}
Length = 196
Score = 98.9 bits (245), Expect = 3e-26
Identities = 47/208 (22%), Positives = 104/208 (50%), Gaps = 33/208 (15%)
Query: 11 VIIGAPGCGKGTISSRIIDHFNVKHIATGDILRSHIAQN-TTLGLKAKEYMNKGLLVPDD 69
++G PG GKGT +++ ++ H++ GD+LR+ + + G K + +G +VP +
Sbjct: 12 FVLGGPGAGKGTQCEKLVKDYSFVHLSAGDLLRAEQGRAGSQYGELIKNCIKEGQIVPQE 71
Query: 70 LMIDLVKNEVKDL----KCNYLLDGFPRTYDQAMALFKNHLSPNCVMHINVPKEVIIDRL 125
+ + L++N + D K +L+DGFPR DQA++ ++ + ++ + P++++++RL
Sbjct: 72 ITLALLRNAISDNVKANKHKFLIDGFPRKMDQAISFERDIVESKFILFFDCPEDIMLERL 131
Query: 126 SKRWIHPASGRVYNLDFNAPKKPGIDDITGEKLIQRDDDKPEAIKKRLETFDQTIKPLLD 185
+R R DD E+IKKR TF +T P+++
Sbjct: 132 LERGKTS---------------------------GRSDDNIESIKKRFNTFKETSMPVIE 164
Query: 186 YYDNREVLDTFTGN-TTDEIWPRIYEHL 212
Y++ + + + + ++++ + + +
Sbjct: 165 YFETKSKVVRVRCDRSVEDVYKDVQDAI 192
>d1ak2a1 c.37.1.1 (A:14-146,A:177-233) Adenylate kinase {Cow (Bos
taurus), mitochondrial izozyme-2 [TaxId: 9913]}
Length = 190
Score = 98.1 bits (243), Expect = 4e-26
Identities = 64/213 (30%), Positives = 106/213 (49%), Gaps = 37/213 (17%)
Query: 8 LKAVIIGAPGCGKGTISSRIIDHFNVKHIATGDILRSHIAQNTTLGLKAKEYMNKGLLVP 67
++AV++G PG GKGT + ++ +F V H+ATGD+LR+ +A + LG K K M+ G LV
Sbjct: 4 VRAVLLGPPGAGKGTQAPKLAKNFCVCHLATGDMLRAMVASGSELGKKLKATMDAGKLVS 63
Query: 68 DDLMIDLVKNEVK--DLKCNYLLDGFPRTYDQAMAL----FKNHLSPNCVMHINVPKEVI 121
D+++++L++ ++ K +LLDGFPRT QA L K + V+ ++P ++
Sbjct: 64 DEMVLELIEKNLETPPCKNGFLLDGFPRTVRQAEMLDDLMEKRKEKLDSVIEFSIPDSLL 123
Query: 122 IDRLSKRWIHPASGRVYNLDFNAPKKPGIDDITGEKLIQRDDDKPEAIKKRLETFDQTIK 181
I R++ R IH DD +A+K RLE +
Sbjct: 124 IRRITGRLIHS------------------------------DDNKKALKIRLEAYHTQTT 153
Query: 182 PLLDYYDNREVLDTFTGNTT-DEIWPRIYEHLN 213
PL++YY R + + T D ++ I +
Sbjct: 154 PLVEYYSKRGIHSAIDASQTPDVVFASILAAFS 186
>d1qf9a_ c.37.1.1 (A:) UMP/CMP kinase {Dictyostelium discoideum
[TaxId: 44689]}
Length = 194
Score = 93.1 bits (230), Expect = 3e-24
Identities = 52/207 (25%), Positives = 89/207 (42%), Gaps = 32/207 (15%)
Query: 11 VIIGAPGCGKGTISSRIIDHFNVKHIATGDILRSHIAQNTTLGLKAKEYMNKGLLVPDDL 70
++G PG GKGT + I+ F H++ GD+LR + G + G +VP +
Sbjct: 10 FVLGGPGSGKGTQCANIVRDFGWVHLSAGDLLRQEQQSGSKDGEMIATMIKNGEIVPSIV 69
Query: 71 MIDLVKNEVKDLKC-NYLLDGFPRTYDQAMAL---FKNHLSPNCVMHINVPKEVIIDRLS 126
+ L+KN + + N+L+DGFPR + + K+ + V+ + P+EV+ RL
Sbjct: 70 TVKLLKNAIDANQGKNFLVDGFPRNEENNNSWEENMKDFVDTKFVLFFDCPEEVMTQRLL 129
Query: 127 KRWIHPASGRVYNLDFNAPKKPGIDDITGEKLIQRDDDKPEAIKKRLETFDQTIKPLLDY 186
KR R DD E+IKKR TF+ K ++D+
Sbjct: 130 KRGESS---------------------------GRSDDNIESIKKRFNTFNVQTKLVIDH 162
Query: 187 YDNREVLDTFTGN-TTDEIWPRIYEHL 212
Y+ + + N +E++ +
Sbjct: 163 YNKFDKVKIIPANRDVNEVYNDVENLF 189
>d1zaka1 c.37.1.1 (A:3-127,A:159-222) Adenylate kinase {Maize (Zea
mays) [TaxId: 4577]}
Length = 189
Score = 92.2 bits (228), Expect = 6e-24
Identities = 67/221 (30%), Positives = 107/221 (48%), Gaps = 41/221 (18%)
Query: 8 LKAVIIGAPGCGKGTISSRIIDHFNVKHIATGDILRSHIAQNTTLGLKAKEYMNKGLLVP 67
LK +I GAP GKGT I + + HI+ GD+LR+ IA + G +AKE+M KG LVP
Sbjct: 4 LKVMISGAPASGKGTQCELIKTKYQLAHISAGDLLRAEIAAGSENGKRAKEFMEKGQLVP 63
Query: 68 DDLMIDLVKNE---VKDLKCNYLLDGFPRTYDQAMALFKNHLSPNCVMHINVPKEVIIDR 124
D++++++VK + +LLDG+PR+Y QAMAL + P+ + ++VP E++++R
Sbjct: 64 DEIVVNMVKERLRQPDAQENGWLLDGYPRSYSQAMALETLEIRPDTFILLDVPDELLVER 123
Query: 125 LSKRWIHPASGRVYNLDFNAPKKPGIDDITGEKLIQRDDDKPEAIKKRLETFDQTIKPLL 184
+ E +K RLET+ Q I+ LL
Sbjct: 124 VVFDDT-----------------------------------EEKVKLRLETYYQNIESLL 148
Query: 185 DYYDNREVLDTFTGN-TTDEIWPRIYEHLNIRIPPLKRLEP 224
Y+N + G+ T D ++ +I E L + +
Sbjct: 149 STYENI--IVKVQGDATVDAVFAKIDELLGSILEKKNEMVS 187
>d1teva_ c.37.1.1 (A:) UMP/CMP kinase {Human (Homo sapiens) [TaxId:
9606]}
Length = 194
Score = 92.3 bits (228), Expect = 8e-24
Identities = 49/214 (22%), Positives = 96/214 (44%), Gaps = 38/214 (17%)
Query: 11 VIIGAPGCGKGTISSRIIDHFNVKHIATGDILRSHIA-QNTTLGLKAKEYMNKGLLVPDD 69
++G PG GKGT +RI++ + H++ G++LR ++ G ++Y+ +G +VP +
Sbjct: 5 FVLGGPGAGKGTQCARIVEKYGYTHLSAGELLRDERKNPDSQYGELIEKYIKEGKIVPVE 64
Query: 70 LMIDLVKNEVKDL------KCNYLLDGFPRTYDQAMAL---FKNHLSPNCVMHINVPKEV 120
+ I L+K E+ K +L+DGFPR D + V+ + E+
Sbjct: 65 ITISLLKREMDQTMAANAQKNKFLIDGFPRNQDNLQGWNKTMDGKADVSFVLFFDCNNEI 124
Query: 121 IIDRLSKRWIHPASGRVYNLDFNAPKKPGIDDITGEKLIQRDDDKPEAIKKRLETFDQTI 180
I+R +R R DD E+++KR++T+ Q+
Sbjct: 125 CIERCLERGKSS---------------------------GRSDDNRESLEKRIQTYLQST 157
Query: 181 KPLLDYYDNREVLDTFTGN-TTDEIWPRIYEHLN 213
KP++D Y+ + + + DE++ + + +
Sbjct: 158 KPIIDLYEEMGKVKKIDASKSVDEVFDEVVQIFD 191
>d1e4va1 c.37.1.1 (A:1-121,A:157-214) Adenylate kinase {Escherichia
coli [TaxId: 562]}
Length = 179
Score = 85.8 bits (211), Expect = 2e-21
Identities = 58/209 (27%), Positives = 97/209 (46%), Gaps = 43/209 (20%)
Query: 8 LKAVIIGAPGCGKGTISSRIIDHFNVKHIATGDILRSHIAQNTTLGLKAKEYMNKGLLVP 67
++ +++GAP GKGT + I++ + + I+TGD+LR+ + + LG +AK+ M+ G LV
Sbjct: 1 MRIILLGAPVAGKGTQAQFIMEKYGIPQISTGDMLRAAVKSGSELGKQAKDIMDAGKLVT 60
Query: 68 DDLMIDLVKNEVKDLKCN--YLLDGFPRTYDQAMALFKNHLSPNCVMHINVPKEVIIDRL 125
D+L+I LVK + C +LLDGFPRT QA A+ + ++ + V+ +VP E+I+DR+
Sbjct: 61 DELVIALVKERIAQEDCRNGFLLDGFPRTIPQADAMKEAGINVDYVLEFDVPDELIVDRI 120
Query: 126 SKRWIHPASGRVYNLDFNAPKKPGIDDITGEKLIQRDDDKPEAIKKRLETFDQTIKPLLD 185
K + E ++KRL + Q PL+
Sbjct: 121 VKDD-----------------------------------QEETVRKRLVEYHQMTAPLIG 145
Query: 186 YYDNREVLDTFT------GNTTDEIWPRI 208
YY E+ +
Sbjct: 146 YYSKEAEAGNTKYAKVDGTKPVAEVRADL 174
>d1akya1 c.37.1.1 (A:3-130,A:169-220) Adenylate kinase {Baker's
yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Length = 180
Score = 83.5 bits (205), Expect = 1e-20
Identities = 51/207 (24%), Positives = 91/207 (43%), Gaps = 32/207 (15%)
Query: 8 LKAVIIGAPGCGKGTISSRIIDHFNVKHIATGDILRSHIAQNTTLGLKAKEYMNKGLLVP 67
++ V+IG PG GKGT + + + F+ H+ATGD+LRS IA+ T LGL+AK+ M++G LV
Sbjct: 3 IRMVLIGPPGAGKGTQAPNLQERFHAAHLATGDMLRSQIAKGTQLGLEAKKIMDQGGLVS 62
Query: 68 DDLMIDLVKNEVKDLKCNYLLDGFPRTYDQAMALFKNHLSPNCVMHINVPKEVIIDRLSK 127
DD+M++++K+E+ + I+D +
Sbjct: 63 DDIMVNMIKDELTNNPACK-------------------------------NGFILDGFPR 91
Query: 128 RWIHPASGRVYNLDFNAPKKPGIDDITGEKLIQRDDDKPEAIKKRLETFDQTIKPLLDYY 187
+ P + I+ ++L+ +A+KKRL + +P++D+Y
Sbjct: 92 TIPQAEKLDQMLKEQGTPLEKAIELKVDDELLVARITNADALKKRLAAYHAQTEPIVDFY 151
Query: 188 DNREVLDTFTGN-TTDEIWPRIYEHLN 213
+ + +W I L
Sbjct: 152 KKTGIWAGVDASQPPATVWADILNKLG 178
>d1akya2 g.41.2.1 (A:131-168) Microbial and mitochondrial ADK,
insert "zinc finger" domain {Baker's yeast
(Saccharomyces cerevisiae) [TaxId: 4932]}
Length = 38
Score = 68.2 bits (167), Expect = 2e-16
Identities = 23/37 (62%), Positives = 27/37 (72%)
Query: 128 RWIHPASGRVYNLDFNAPKKPGIDDITGEKLIQRDDD 164
R IHPASGR Y+ FN PK+ DD+TGE L+QR DD
Sbjct: 2 RLIHPASGRSYHKIFNPPKEDMKDDVTGEALVQRSDD 38
>d2ak3a2 g.41.2.1 (A:125-161) Microbial and mitochondrial ADK,
insert "zinc finger" domain {Cow (Bos taurus),
mitochondrial izozyme-3 [TaxId: 9913]}
Length = 37
Score = 67.8 bits (166), Expect = 2e-16
Identities = 26/36 (72%), Positives = 31/36 (86%)
Query: 128 RWIHPASGRVYNLDFNAPKKPGIDDITGEKLIQRDD 163
RWIHP SGRVYN++FN PK GIDD+TGE L+QR+D
Sbjct: 2 RWIHPGSGRVYNIEFNPPKTMGIDDLTGEPLVQRED 37
>d1s3ga2 g.41.2.1 (A:126-160) Microbial and mitochondrial ADK,
insert "zinc finger" domain {Bacillus globisporus
[TaxId: 1459]}
Length = 35
Score = 66.9 bits (164), Expect = 5e-16
Identities = 14/34 (41%), Positives = 17/34 (50%)
Query: 128 RWIHPASGRVYNLDFNAPKKPGIDDITGEKLIQR 161
R I G Y+L FN P+ G D G +L QR
Sbjct: 2 RRICKVCGTSYHLLFNPPQVEGKCDKDGGELYQR 35
>d1zina2 g.41.2.1 (A:126-160) Microbial and mitochondrial ADK,
insert "zinc finger" domain {Bacillus stearothermophilus
[TaxId: 1422]}
Length = 35
Score = 65.4 bits (160), Expect = 2e-15
Identities = 15/34 (44%), Positives = 19/34 (55%)
Query: 128 RWIHPASGRVYNLDFNAPKKPGIDDITGEKLIQR 161
R I G Y+L F+ P KPG+ D G +L QR
Sbjct: 2 RRICRNCGATYHLIFHPPAKPGVCDKCGGELYQR 35
>d1ak2a2 g.41.2.1 (A:147-176) Microbial and mitochondrial ADK,
insert "zinc finger" domain {Cow (Bos taurus),
mitochondrial izozyme-2 [TaxId: 9913]}
Length = 30
Score = 62.3 bits (152), Expect = 3e-14
Identities = 19/30 (63%), Positives = 23/30 (76%)
Query: 132 PASGRVYNLDFNAPKKPGIDDITGEKLIQR 161
P SGR Y+ +FN PK+P DDITGE LI+R
Sbjct: 1 PQSGRSYHEEFNPPKEPMKDDITGEPLIRR 30
>d1e4va2 g.41.2.1 (A:122-156) Microbial and mitochondrial ADK,
insert "zinc finger" domain {Escherichia coli [TaxId:
562]}
Length = 35
Score = 62.1 bits (151), Expect = 3e-14
Identities = 19/34 (55%), Positives = 24/34 (70%)
Query: 128 RWIHPASGRVYNLDFNAPKKPGIDDITGEKLIQR 161
R +H SGRVY++ FN PK G DD+TGE+L R
Sbjct: 2 RRVHAPSGRVYHVKFNPPKVEGKDDVTGEELTTR 35
>d1ckea_ c.37.1.1 (A:) CMP kinase {Escherichia coli [TaxId: 562]}
Length = 225
Score = 59.3 bits (142), Expect = 2e-11
Identities = 27/217 (12%), Positives = 66/217 (30%), Gaps = 14/217 (6%)
Query: 12 IIGAPGCGKGTISSRIIDHFNVKHIATGDILRSHIAQNTTLGLKAKEYMNKGLLVPDDLM 71
I G G GKGT+ + + + +G I R + L +
Sbjct: 8 IDGPSGAGKGTLCKAMAEALQWHLLDSGAIYRVLALAALHHHVDVASEDALVPLASHLDV 67
Query: 72 IDL-------VKNEVKDLKCNYLLDGFPRT--YDQAMALFKNHLSPNCVMHINVPKEVII 122
+ V E +D+ A + L +P +
Sbjct: 68 RFVSTNGNLEVILEGEDVSGEIRTQEVANAASQVAAFPRVREALLRRQRAFRELPGLIAD 127
Query: 123 DRLSKRWIHPASGRVYNLDFNAPKKPGIDDITGEKLIQ---RDDDKPEAIKKRLETFDQT 179
R + P + LD ++ ++ + + + E ++ ++
Sbjct: 128 GRDMGTVVFPDAPVKIFLDASSEERAHRRMLQLQVKGFSVNFERLLAEIKERDDRDRNRA 187
Query: 180 IKPLLDYYDNREVLDTFTGNTTDEIWPRIYEHLNIRI 216
+ PL+ D + D+ T + +++ + ++ ++
Sbjct: 188 VAPLVPAADALVL-DS-TTLSIEQVIEKALQYARQKL 222
>d1nksa_ c.37.1.1 (A:) Adenylate kinase {Archaeon Sulfolobus
acidocaldarius [TaxId: 2285]}
Length = 194
Score = 57.3 bits (137), Expect = 6e-11
Identities = 24/211 (11%), Positives = 50/211 (23%), Gaps = 31/211 (14%)
Query: 11 VIIGAPGCGKGTISSRIIDHF-----NVKHIATGDILRSHIAQNTTLG---LKAKEYMNK 62
++ G PG GK T+ +++ + N K I GD + + + K + K
Sbjct: 5 IVTGIPGVGKSTVLAKVKEILDNQGINNKIINYGDFMLATALKLGYAKDRDEMRKLSVEK 64
Query: 63 GLLVPDDLMIDLVKNEVKDLKCNYLLDGFPRTYDQAMALFKNHLSPNCVMHINVPKEVII 122
+ D + + + +D + L
Sbjct: 65 QKKLQIDAAKGIAEEARAGGEGYLFIDTHAVIRTPSGYL--------------------- 103
Query: 123 DRLSKRWIHPASGRVYNLDFNAPKKPGIDDITGEKLIQRDDDKPEAIKKRLETFDQTIKP 182
++ A K + + R+D E++ F +
Sbjct: 104 -PGLPSYVITEINPSVIFLLEADPKIILSRQKRDTTRNRNDYSDESVILETINFARYAAT 162
Query: 183 LLDYYDNREVLDTFTGNTT-DEIWPRIYEHL 212
V I +
Sbjct: 163 ASAVLAGSTVKVIVNVEGDPSIAANEIIRSM 193
>d2bdta1 c.37.1.25 (A:1-176) Hypothetical protein BH3686 {Bacillus
halodurans [TaxId: 86665]}
Length = 176
Score = 57.0 bits (136), Expect = 8e-11
Identities = 23/166 (13%), Positives = 48/166 (28%), Gaps = 4/166 (2%)
Query: 11 VIIGAPGCGKGTISSRIIDHFNVKHIATGDILRSHIAQNTTLGLKAKEYMNKGLLVPDDL 70
+I G G GK T R+ + GDI+ + ++ E + DL
Sbjct: 6 IITGPAGVGKSTTCKRLAAQLDNSAYIEGDIINHMVVGGYRPPWESDELLALTWKNITDL 65
Query: 71 MIDLVKNEVKDLKCNYLLDGFPRTYDQAMALFKNHLSPNCVMHINVPKEVIIDRLSKRWI 130
++ + + + Q K + + +E ++ R + R
Sbjct: 66 TVNFLLAQNDVVLDYIAFPDEAEALAQ-TVQAKVDDVEIRFIILWTNREELLRRDALRKK 124
Query: 131 HPASGRVYNLDFNAPKKPGIDDITGEKLIQRDDDKPEAIKKRLETF 176
G + GID+ +P + ++
Sbjct: 125 DEQMGERCLELVEEFESKGIDE---RYFYNTSHLQPTNLNDIVKNL 167
>d1khta_ c.37.1.1 (A:) Adenylate kinase {Archaeon Methanococcus
voltae [TaxId: 2188]}
Length = 190
Score = 52.3 bits (124), Expect = 4e-09
Identities = 22/209 (10%), Positives = 50/209 (23%), Gaps = 31/209 (14%)
Query: 11 VIIGAPGCGKGTISSRIIDHF-----NVKHIATGDILRSHIAQNTTLGLKAKEYMNKGLL 65
V+ G PG G T S +D+ N K ++ G ++ + + ++ M K
Sbjct: 5 VVTGVPGVGSTTSSQLAMDNLRKEGVNYKMVSFGSVMFEVAKE--ENLVSDRDQMRKMDP 62
Query: 66 VPDDLMIDLVKNEVKDLKC--NYLLDGFPRTYDQAMALFKNHLSPNCVMHINVPKEVIID 123
+ + ++ ++ +D L
Sbjct: 63 ETQKRIQKMAGRKIAEMAKESPVAVDTHSTVSTPKGYL---------------------- 100
Query: 124 RLSKRWIHPASGRVYNLDFNAPKKPGIDDITGEKLIQRDDDKPEAIKKRLETFDQTIKPL 183
W+ + + ++ RD D I++
Sbjct: 101 PGLPSWVLNELNPDLIIVVETTGDEILMRRMSDETRVRDLDTASTIEQHQFMNRCAAMSY 160
Query: 184 LDYYDNREVLDTFTGNTTDEIWPRIYEHL 212
+ D+ + L
Sbjct: 161 GVLTGATVKIVQNRNGLLDQAVEELTNVL 189
>d1y63a_ c.37.1.1 (A:) Probable kinase LmjF30.1890 {Leishmania major
[TaxId: 5664]}
Length = 174
Score = 51.5 bits (122), Expect = 6e-09
Identities = 24/168 (14%), Positives = 57/168 (33%), Gaps = 16/168 (9%)
Query: 11 VIIGAPGCGKGTISSRIIDHFNVKHIATGDILRSHIAQNTTLGLKAKEYMNKGLLVPDDL 70
+I G PG GK +++ I + L T + ++ +
Sbjct: 9 LITGTPGTGKTSMAEMIAAELDGFQHLEVGKLVKENHFYTE-----YDTELDTHIIEEKD 63
Query: 71 MIDLVK--NEVKDLKCNYLLDGFPRTYDQAMALFKNHLSPNCVMHINVPKEVIIDRLSKR 128
L+ + + N+++D + V+ ++ EV+ +RL+KR
Sbjct: 64 EDRLLDFMEPIMVSRGNHVVDYHSSELFPER-------WFHMVVVLHTSTEVLFERLTKR 116
Query: 129 WIHP--ASGRVYNLDFNAPKKPGIDDITGEKLIQRDDDKPEAIKKRLE 174
+ + ++ D + ++ R++D E + +E
Sbjct: 117 QYSEAKRAENMEAEIQCICEEEARDAYEDDIVLVRENDTLEQMAATVE 164
>d1ly1a_ c.37.1.1 (A:) Polynucleotide kinase, kinase domain
{Bacteriophage T4 [TaxId: 10665]}
Length = 152
Score = 50.9 bits (120), Expect = 9e-09
Identities = 22/130 (16%), Positives = 39/130 (30%), Gaps = 4/130 (3%)
Query: 7 MLKAVII-GAPGCGKGTISSRIIDHFNVKHIATGDILRSHIAQNTTLGLKAKEYMNKGLL 65
M K ++ G PG GK T + I + D R I + +G++
Sbjct: 1 MKKIILTIGCPGSGKSTWAREFIAKNPGFYNINRDDYRQSIMAHEERDEYKYTKKKEGIV 60
Query: 66 VPDDLMIDLVKNEVKDLKCNYLLDGFPRTYDQAMAL---FKNHLSPNCVMHINVPKEVII 122
D ++ ++ +A K + +VP ++
Sbjct: 61 TGMQFDTAKSILYGGDSVKGVIISDTNLNPERRLAWETFAKEYGWKVEHKVFDVPWTELV 120
Query: 123 DRLSKRWIHP 132
R SKR
Sbjct: 121 KRNSKRGTKA 130
>d1rkba_ c.37.1.1 (A:) Adenylate kinase {Human (Homo sapiens),
isoenzyme 6 [TaxId: 9606]}
Length = 173
Score = 50.3 bits (119), Expect = 1e-08
Identities = 27/172 (15%), Positives = 58/172 (33%), Gaps = 17/172 (9%)
Query: 5 LLMLKAVIIGAPGCGKGTISSRIIDHFNVKHIATGDILRSHIAQNTTLGLKAKEYMNKGL 64
+L+ ++ G PG GK T+ + +K+I GD+ R Y +
Sbjct: 2 MLLPNILLTGTPGVGKTTLGKELASKSGLKYINVGDLAREEQ--------LYDGYDEEYD 53
Query: 65 LVPDDLMIDLVKNEVKDLKCNYLLDGFPRTYDQAMALFKNHLSPNCVMHINVPKEVIIDR 124
D + + + + + ++D F + V + V+ +R
Sbjct: 54 CPILDEDRVVDELDNQMREGGVIVDYHGCD-------FFPERWFHIVFVLRTDTNVLYER 106
Query: 125 LSKRWIHP--ASGRVYNLDFNAPKKPGIDDITGEKLIQRDDDKPEAIKKRLE 174
L R + + + F + E + Q +KPE ++ ++
Sbjct: 107 LETRGYNEKKLTDNIQCEIFQVLYEEATASYKEEIVHQLPSNKPEELENNVD 158
>d1q3ta_ c.37.1.1 (A:) CMP kinase {Streptococcus pneumoniae [TaxId:
1313]}
Length = 223
Score = 50.0 bits (118), Expect = 4e-08
Identities = 34/218 (15%), Positives = 61/218 (27%), Gaps = 15/218 (6%)
Query: 12 IIGAPGCGKGTISSRIIDHFNVKHIATGDILRSHIAQNTTLGLKAKEYMNKGLLVPDDLM 71
I G GK T++ I F ++ TG + R+ L +E L+ +
Sbjct: 8 IDGPASSGKSTVAKIIAKDFGFTYLDTGAMYRAATYMALKNQLGVEEVEALLALLDQHPI 67
Query: 72 IDLVKNEVKDLKCNYLLDGFPRTYDQ----------AMALFKNHLSPNCVMHINVPKEVI 121
L +D + A+ + L V+
Sbjct: 68 SFGRSETGDQLVFVGDVDITHPIRENEVTNHVSAIAAIPEVREKLVSLQQEIAQQGGIVM 127
Query: 122 IDRLSKRWIHPASGRVYNLDFNA--PKKPGIDDITGEKLIQRDDDKPEAIKKRLET-FDQ 178
R + P + L + + + + + + + I R +
Sbjct: 128 DGRDIGTVVLPQAELKIFLVASVDERAERRYKENIAKGIETDLETLKKEIAARDYKDSHR 187
Query: 179 TIKPLLDYYDNREVLDTFTGNTTDEIWPRIYEHLNIRI 216
PL D LDT TG E+ +I R+
Sbjct: 188 ETSPLKQAEDAV-YLDT-TGLNIQEVVEKIKAEAEKRM 223
>d1knqa_ c.37.1.17 (A:) Gluconate kinase {Escherichia coli [TaxId:
562]}
Length = 171
Score = 48.1 bits (113), Expect = 1e-07
Identities = 19/138 (13%), Positives = 41/138 (29%), Gaps = 5/138 (3%)
Query: 11 VIIGAPGCGKGTISSRIIDHFNVKHIATGDILRSHIAQNTTLGLKAKEYMNKGLLVPDDL 70
V++G G GK ++S + + + + + G + K L +
Sbjct: 10 VLMGVSGSGKSAVASEVAHQLHAAFLDGDFLHPRRNIEKMASGEPLNDDDRKPWLQALND 69
Query: 71 MIDLVKNEVKDLKCNYLLDGFPRTYDQAMALFKNHLSPNCVMHINVPKEVIIDRLSKRWI 130
++ L L + +++ +VI RL R
Sbjct: 70 AAFAMQR-----TNKVSLIVCSALKKHYRDLLREGNPNLSFIYLKGDFDVIESRLKARKG 124
Query: 131 HPASGRVYNLDFNAPKKP 148
H ++ F ++P
Sbjct: 125 HFFKTQMLVTQFETLQEP 142
>d1yj5a2 c.37.1.1 (A:351-522) 5' polynucleotide kinase-3'
phosphatase, C-terminal domain {Mouse (Mus musculus)
[TaxId: 10090]}
Length = 172
Score = 44.5 bits (104), Expect = 2e-06
Identities = 25/179 (13%), Positives = 48/179 (26%), Gaps = 36/179 (20%)
Query: 11 VIIGAPGCGKGTISSRIIDHFNVKHIATGDILRSHIAQNTTLGLKAKEYMNKGLLVPDDL 70
V +G PG GK T + H +N+ L
Sbjct: 18 VAVGFPGAGKSTFIQEHLVSAGYVH------------------------VNRDTLGSWQR 53
Query: 71 MIDLVKNEVKDLKCNYLLDGFPR--TYDQAMALFKNHLSPNCVMHINVPKEVIIDRLSKR 128
+ + ++ K + + P + + + K+ P + E R
Sbjct: 54 CVSSCQAALRQGKRVVIDNTNPDVPSRARYIQCAKDAGVPCRCFNFCATIEQARHNNRFR 113
Query: 129 WIHPASG--------RVYNLDFNAPKKP-GIDDITGEKLIQRDDDKPEAIKKRLETFDQ 178
+ S Y F P G +I E + + A+++ F +
Sbjct: 114 EMTDPSHAPVSDMVMFSYRKQFEPPTLAEGFLEIL-EIPFRLQEHLDPALQRLYRQFSE 171
>d1zp6a1 c.37.1.25 (A:6-181) Hypothetical protein Atu3015
{Agrobacterium tumefaciens [TaxId: 358]}
Length = 176
Score = 41.5 bits (96), Expect = 2e-05
Identities = 22/130 (16%), Positives = 37/130 (28%), Gaps = 6/130 (4%)
Query: 11 VIIGAPGCGKGTISSRIIDHFNVKHIAT-GDILRSHIAQNTTLGLKAKEYMNKGLLVPDD 69
++ G PG GK TI+ + + V + D L +I + +
Sbjct: 8 LLSGHPGSGKSTIAEALANLPGVPKVHFHSDDLWGYIKHG---RIDPWLPQSHQQNRMIM 64
Query: 70 LMIDLVKNEVKDLKCNYLLDGFPRTYDQAMALFKNHLSPNCVMHINVPKEVIIDRLSKRW 129
+ V +LDG R F P + + I+R R
Sbjct: 65 QIAADVAGRYAKEGYFVILDGVVRPDWLPA--FTALARPLHYIVLRTTAAEAIERCLDRG 122
Query: 130 IHPASGRVYN 139
S +
Sbjct: 123 GDSLSDPLVV 132
>d1qhxa_ c.37.1.3 (A:) Chloramphenicol phosphotransferase
{Streptomyces venezuelae [TaxId: 54571]}
Length = 178
Score = 40.8 bits (94), Expect = 4e-05
Identities = 13/172 (7%), Positives = 31/172 (18%), Gaps = 15/172 (8%)
Query: 11 VIIGAPGCGKGTISSRIIDHFNVKHIATGDILRSHIAQNTTLGLKAKEYMNKGLLVPDDL 70
++ G GK I + +A G + + V
Sbjct: 7 ILNGGSSAGKSGIVRCLQSVLPEPWLAFGVDSLIEAMPLKMQSAEGGIEFDADGGVSIGP 66
Query: 71 MIDLVKNEVKDLKCNYLLD---------GFPRTYDQAMALFKNHLSPNCVMHINVPKEVI 121
++ + Q + + V
Sbjct: 67 EFRALEGAWAEGVVAMARAGARIIIDDVFLGGAAAQERWRSFVGDLDVLWVGVRCDGAVA 126
Query: 122 IDRLSKRWIHPASGRVYNLDFNAPKKPGIDDITGEKLIQRDDDKPEAIKKRL 173
R + R A + + D+ + + +
Sbjct: 127 EGRETARGDRVA--GMAAKQAYVVHEGVEYDVE----VDTTHKESIECAWAI 172
>d1gvnb_ c.37.1.21 (B:) Plasmid maintenance system epsilon/zeta,
toxin zeta subunit {Streptococcus pyogenes [TaxId:
1314]}
Length = 273
Score = 33.8 bits (76), Expect = 0.012
Identities = 35/234 (14%), Positives = 74/234 (31%), Gaps = 17/234 (7%)
Query: 9 KAVII-GAPGCGKGTISSRIIDHFNVKHIA-TGDILRSHIAQNTTLGLKAKEYMNKGLLV 66
A ++ G PG GK ++ S I + I D + L ++ + K +
Sbjct: 33 TAFLLGGQPGSGKTSLRSAIFEETQGNVIVIDNDTFKQQHPNFDELVKLYEKDVVKHVTP 92
Query: 67 PDDLMIDLVKNEVKDLKCNYLLDGFPRT---YDQAMALFKNHLSPNCVMHINVPKEVIID 123
+ M + + + + D N +++G RT Q + + + + VPK
Sbjct: 93 YSNRMTEAIISRLSDQGYNLVIEGTGRTTDVPIQTATMLQAKGYETKMYVMAVPKINSYL 152
Query: 124 RLSKRWIHPASGRVYNLDFNAPKKPGIDDITGEKLIQRDDDKPEAIKKRLETFDQTI--- 180
+R+ + + I ++ RL +
Sbjct: 153 GTIERYETMYADDPMTARATPKQAHDIVVKNLPTNLETLHKTGLFSDIRLYNREGVKLYS 212
Query: 181 ---------KPLLDYYDNREVLDTFTGNTTDEIWPRIYEHLNIRIPPLKRLEPR 225
K L+ NR+V T + I ++ + + P K ++ +
Sbjct: 213 SLETPSISPKETLEKELNRKVSGKEIQPTLERIEQKMVLNKHQETPEFKAIQQK 266
>d1deka_ c.37.1.1 (A:) Deoxynucleoside monophosphate kinase
{Bacteriophage T4 [TaxId: 10665]}
Length = 241
Score = 33.4 bits (75), Expect = 0.014
Identities = 10/76 (13%), Positives = 23/76 (30%)
Query: 7 MLKAVIIGAPGCGKGTISSRIIDHFNVKHIATGDILRSHIAQNTTLGLKAKEYMNKGLLV 66
M + G GK T + I+ +++ ++ +A + +Y
Sbjct: 1 MKLIFLSGVKRSGKDTTADFIMSNYSAVKYQLAGPIKDALAYAWGVFAANTDYPCLTRKE 60
Query: 67 PDDLMIDLVKNEVKDL 82
+ + D N
Sbjct: 61 FEGIDYDRETNLNLTK 76
>d1vg8a_ c.37.1.8 (A:) Rab7 {Rat (Rattus norvegicus) [TaxId:
10116]}
Length = 184
Score = 32.7 bits (73), Expect = 0.020
Identities = 10/33 (30%), Positives = 21/33 (63%), Gaps = 1/33 (3%)
Query: 7 MLKAVIIGAPGCGKGTISSRII-DHFNVKHIAT 38
+LK +I+G G GK ++ ++ + F+ ++ AT
Sbjct: 2 LLKVIILGDSGVGKTSLMNQYVNKKFSNQYKAT 34
>d1lvga_ c.37.1.1 (A:) Guanylate kinase {Mouse (Mus musculus)
[TaxId: 10090]}
Length = 190
Score = 32.6 bits (73), Expect = 0.021
Identities = 23/180 (12%), Positives = 57/180 (31%), Gaps = 23/180 (12%)
Query: 11 VIIGAPGCGKGTISSRIIDHFNVKHIATGDILRSHIAQNTTLGLKAKEYMNKGLLVPDDL 70
V+ G G GK T+ ++ + I ++ T +E V ++
Sbjct: 4 VLSGPSGAGKSTLLKKLFQEHS-------SIFGFSVSHTTRNPRPGEEDGKDYYFVTREM 56
Query: 71 MIDLVKNEVKDLKCNYLLDGFPRTYDQAMALFKNHLSPNCVMHINVPKEVIIDRLSKRWI 130
M + + + + + + A+ + + + + + L +I
Sbjct: 57 MQRDIAAGDFIEHAEFSGNLYGTSKEAVRAVQAMNRICVLDVDLQGVRSIKKTDLCPIYI 116
Query: 131 HPASGRVYNLDFNAPKKPGIDDITGEKLIQRDDDKPEAIKKRLETFDQTIK--PLLDYYD 188
+P D+ ++L R+ + E++ KRL ++ +D
Sbjct: 117 F--------------VQPPSLDVLEQRLRLRNTETEESLAKRLAAARTDMESSKEPGLFD 162
>d1e6ca_ c.37.1.2 (A:) Shikimate kinase (AroK) {Erwinia chrysanthemi
[TaxId: 556]}
Length = 170
Score = 32.2 bits (72), Expect = 0.025
Identities = 15/103 (14%), Positives = 32/103 (31%)
Query: 11 VIIGAPGCGKGTISSRIIDHFNVKHIATGDILRSHIAQNTTLGLKAKEYMNKGLLVPDDL 70
++GA GCG T+ + + + T ++ + A+ + + L
Sbjct: 6 FMVGARGCGMTTVGRELARALGYEFVDTDIFMQHTSGMTVADVVAAEGWPGFRRRESEAL 65
Query: 71 MIDLVKNEVKDLKCNYLLDGFPRTYDQAMALFKNHLSPNCVMH 113
N V +L R + +A +P +
Sbjct: 66 QAVATPNRVVATGGGMVLLEQNRQFMRAHGTVVYLFAPAEELA 108
>d1viaa_ c.37.1.2 (A:) Shikimate kinase (AroK) {Campylobacter jejuni
[TaxId: 197]}
Length = 161
Score = 31.8 bits (71), Expect = 0.032
Identities = 14/123 (11%), Positives = 39/123 (31%), Gaps = 14/123 (11%)
Query: 11 VIIGAPGCGKGTISSRIIDHFNVKHIATGDILRSHIAQNTTLGLKAKEYMNKGLLVPDDL 70
V IG G GK T++ + ++ + + ++ + K + +
Sbjct: 4 VFIGFMGSGKSTLARALAKDLDLVFLDSDFLIEQK-------------FNQKVSEIFEQK 50
Query: 71 MIDLVKNEVKDLKCNYLLDGFPRTYDQAMALFKNHLSPNC-VMHINVPKEVIIDRLSKRW 129
+ + + + + + + ++L +++ E + RL K
Sbjct: 51 RENFFREQEQKMADFFSSCEKACIATGGGFVNVSNLEKAGFCIYLKADFEYLKKRLDKDE 110
Query: 130 IHP 132
I
Sbjct: 111 ISK 113
>d1gkya_ c.37.1.1 (A:) Guanylate kinase {Baker's yeast
(Saccharomyces cerevisiae) [TaxId: 4932]}
Length = 186
Score = 32.2 bits (72), Expect = 0.033
Identities = 25/171 (14%), Positives = 50/171 (29%), Gaps = 20/171 (11%)
Query: 11 VIIGAPGCGKGTISSRIIDHFNVKHIATGDILRSHIAQNTTLGLKAKEYMNKGLLVPDDL 70
VI G G GK T+ ++ + D ++ T +A E K
Sbjct: 5 VISGPSGTGKSTLLKKLFAEYP-------DSFGFSVSSTTRT-PRAGEVNGKD------- 49
Query: 71 MIDLVKNEVKDLKCNYLLDGFPRTYDQAMALFKNHLSPNCVMHINVPKEVIIDRLSKRWI 130
+ +E K + N + + + V ++ + I + + +
Sbjct: 50 YNFVSVDEFKSMIKNNEFIEWAQFSGNYY-----GSTVASVKQVSKSGKTCILDIDMQGV 104
Query: 131 HPASGRVYNLDFNAPKKPGIDDITGEKLIQRDDDKPEAIKKRLETFDQTIK 181
P + ++L R + E+I KRL +
Sbjct: 105 KSVKAIPELNARFLFIAPPSVEDLKKRLEGRGTETEESINKRLSAAQAELA 155
>d1g16a_ c.37.1.8 (A:) Rab-related protein Sec4 {Baker's yeast
(Saccharomyces cerevisiae) [TaxId: 4932]}
Length = 166
Score = 31.7 bits (71), Expect = 0.035
Identities = 12/33 (36%), Positives = 18/33 (54%), Gaps = 1/33 (3%)
Query: 7 MLKAVIIGAPGCGKGTISSRII-DHFNVKHIAT 38
++K ++IG G GK + R + D FN I T
Sbjct: 2 IMKILLIGDSGVGKSCLLVRFVEDKFNPSFITT 34
>d1r8sa_ c.37.1.8 (A:) ADP-ribosylation factor {Human (Homo
sapiens), ARF1 [TaxId: 9606]}
Length = 160
Score = 31.5 bits (70), Expect = 0.039
Identities = 16/140 (11%), Positives = 43/140 (30%), Gaps = 5/140 (3%)
Query: 8 LKAVIIGAPGCGKGTISSRIIDHFNVKHIATGDILRSHIAQNTTLGLKAKEYMNKGLLVP 67
++ +++G GK TI ++ + + T + ++ + + G
Sbjct: 1 MRILMVGLDAAGKTTILYKLKLG---EIVTTIPTIGFNVETVEYKNISFTVWDVGGQDKI 57
Query: 68 DDLMIDLVKNEVKDLKCNYLLD--GFPRTYDQAMALFKNHLSPNCVMHINVPKEVIIDRL 125
L +N + D ++ M + + V+ + K+ + + +
Sbjct: 58 RPLWRHYFQNTQGLIFVVDSNDRERVNEAREELMRMLAEDELRDAVLLVFANKQDLPNAM 117
Query: 126 SKRWIHPASGRVYNLDFNAP 145
+ I G N
Sbjct: 118 NAAEITDKLGLHSLRHRNWY 137
>d2iyva1 c.37.1.2 (A:2-166) Shikimate kinase (AroK) {Mycobacterium
tuberculosis [TaxId: 1773]}
Length = 165
Score = 31.5 bits (70), Expect = 0.042
Identities = 18/124 (14%), Positives = 40/124 (32%), Gaps = 9/124 (7%)
Query: 9 KAVIIGAPGCGKGTISSRIIDHFNVKHIATGDILRSHIAQNTTLGLKAKEYMNKGLLVPD 68
KAV++G PG GK TI R+ V + T + ++
Sbjct: 3 KAVLVGLPGSGKSTIGRRLAKALGVGLLDTDVAIEQRTGRSIADIFATDGEQE------- 55
Query: 69 DLMIDLVKNEVKDLKCNYLLDGFPRTYDQAMALFKNHLSPNCVMHINVPKEVIIDRLSKR 128
+ ++ V+ ++ + L+ + V+++ + + R
Sbjct: 56 --FRRIEEDVVRAALADHDGVLSLGGGAVTSPGVRAALAGHTVVYLEISAAEGVRRTGGN 113
Query: 129 WIHP 132
+ P
Sbjct: 114 TVRP 117
>d1rz3a_ c.37.1.6 (A:) Hypothetical protein rbstp0775 {Bacillus
stearothermophilus [TaxId: 1422]}
Length = 198
Score = 31.7 bits (70), Expect = 0.044
Identities = 13/175 (7%), Positives = 47/175 (26%), Gaps = 16/175 (9%)
Query: 12 IIGAPGCGKGTISSRIIDHFNVKHIATGDILRSHIAQNTTLGLKAKEYMNKGLLVPDDLM 71
I G GK T+++++ + I+ +
Sbjct: 27 IDGLSRSGKTTLANQLSQTLREQGISV-CVFHMDDHIVERAKRYHTGNEEWFEYYYLQWD 85
Query: 72 IDLVKNEVKDLKCNYLLDGFPRTYDQAMALFKNHLSPNCVMHINVPKEVIIDRLSKRWIH 131
++ + +++ P + ++++ ++I+ + +
Sbjct: 86 VEWLTHQLFRQLKASHQLTLPFYD------HETDTHSKRTVYLSDSDMIMIEGVFLQRKE 139
Query: 132 PASGRVYNLDFNAPKKPGIDDITGEKLIQRDDDKPEAIKKRLET----FDQTIKP 182
+ + + P +I + + + R + +T +P
Sbjct: 140 WRPFFDFVVYLDCP-----REIRFARENDQVKQNIQKFINRYWKAEDYYLETEEP 189
>d1ky3a_ c.37.1.8 (A:) Rab-related protein ypt7p {Baker's yeast
(Saccharomyces cerevisiae) [TaxId: 4932]}
Length = 175
Score = 31.2 bits (69), Expect = 0.067
Identities = 11/33 (33%), Positives = 21/33 (63%), Gaps = 1/33 (3%)
Query: 7 MLKAVIIGAPGCGKGTISSRII-DHFNVKHIAT 38
+LK +I+G G GK ++ R + D ++ ++ AT
Sbjct: 2 ILKVIILGDSGVGKTSLMHRYVNDKYSQQYKAT 34
>d1bifa1 c.37.1.7 (A:37-249)
6-phosphofructo-2-kinase/fructose-2,6-bisphosphatase,
kinase domain {Rat (Rattus norvegicus) [TaxId: 10116]}
Length = 213
Score = 31.1 bits (69), Expect = 0.080
Identities = 13/79 (16%), Positives = 25/79 (31%), Gaps = 4/79 (5%)
Query: 11 VIIGAPGCGKGTISSRIIDHFNVKH----IATGDILRSHIAQNTTLGLKAKEYMNKGLLV 66
V++G P GK IS ++ + N R + + +GL +
Sbjct: 6 VMVGLPARGKTYISKKLTRYLNFIGVPTREFNVGQYRRDMVKTYKSFEFFLPDNEEGLKI 65
Query: 67 PDDLMIDLVKNEVKDLKCN 85
+ + + K L
Sbjct: 66 RKQCALAALNDVRKFLSEE 84
>d1wmsa_ c.37.1.8 (A:) Rab9a {Human (Homo sapiens) [TaxId: 9606]}
Length = 174
Score = 30.7 bits (68), Expect = 0.084
Identities = 8/33 (24%), Positives = 19/33 (57%), Gaps = 1/33 (3%)
Query: 7 MLKAVIIGAPGCGKGTISSRII-DHFNVKHIAT 38
+ K +++G G GK ++ +R + + F+ + T
Sbjct: 6 LFKVILLGDGGVGKSSLMNRYVTNKFDTQLFHT 38
>d2f7sa1 c.37.1.8 (A:5-190) Rab27b {Human (Homo sapiens) [TaxId:
9606]}
Length = 186
Score = 30.6 bits (68), Expect = 0.094
Identities = 12/33 (36%), Positives = 17/33 (51%), Gaps = 1/33 (3%)
Query: 7 MLKAVIIGAPGCGKGTISSRII-DHFNVKHIAT 38
++K + +G G GK T R + FN K I T
Sbjct: 5 LIKLLALGDSGVGKTTFLYRYTDNKFNPKFITT 37
>d2ngra_ c.37.1.8 (A:) CDC42 {Human (Homo sapiens) [TaxId: 9606]}
Length = 191
Score = 30.7 bits (68), Expect = 0.100
Identities = 7/32 (21%), Positives = 15/32 (46%), Gaps = 1/32 (3%)
Query: 8 LKAVIIGAPGCGKGTISSRII-DHFNVKHIAT 38
+K V++G GK + + F +++ T
Sbjct: 4 IKCVVVGDGAVGKTCLLISYTTNKFPSEYVPT 35
>d2gjsa1 c.37.1.8 (A:91-258) Rad {Human (Homo sapiens) [TaxId:
9606]}
Length = 168
Score = 30.5 bits (67), Expect = 0.10
Identities = 7/31 (22%), Positives = 13/31 (41%)
Query: 9 KAVIIGAPGCGKGTISSRIIDHFNVKHIATG 39
K +++GAPG GK ++ +
Sbjct: 3 KVLLLGAPGVGKSALARIFGGVEDGPEAEAA 33
>d2atxa1 c.37.1.8 (A:9-193) RhoQ {Human (Homo sapiens) [TaxId:
9606]}
Length = 185
Score = 30.3 bits (67), Expect = 0.12
Identities = 11/34 (32%), Positives = 17/34 (50%), Gaps = 1/34 (2%)
Query: 6 LMLKAVIIGAPGCGKGTISSRII-DHFNVKHIAT 38
LMLK V++G GK + D F +++ T
Sbjct: 8 LMLKCVVVGDGAVGKTCLLMSYANDAFPEEYVPT 41
>d1lw7a2 c.37.1.1 (A:220-411) Transcriptional regulator NadR,
ribosylnicotinamide kinase domain {Haemophilus
influenzae [TaxId: 727]}
Length = 192
Score = 30.4 bits (67), Expect = 0.12
Identities = 16/175 (9%), Positives = 44/175 (25%), Gaps = 9/175 (5%)
Query: 9 KAVIIGAPGCGKGTISSRIIDHFNVKHIA--TGDILRSHIAQN-----TTLGLKAKEYMN 61
I+G GK + +++ FN + + + + + +
Sbjct: 9 TVAILGGESSGKSVLVNKLAAVFNTTSAWEYGREFVFEKLGGDEQAMQYSDYPQMALGHQ 68
Query: 62 KGLLVPDDLMIDLVKNEVKDLKCNYLLDGFPRTYDQAMALFKNHLSPNCVMHINVPKEVI 121
+ + + + + + + + + + E +
Sbjct: 69 RYIDYAVRHSHKIAFIDTDFITTQAFCIQYEGKAHPFLDSMIKEYPFDVTILLKNNTEWV 128
Query: 122 IDRLSKRWIHPASGRVYNLDFNAPKKPGID--DITGEKLIQRDDDKPEAIKKRLE 174
D L + L K + +I + R + I+K L
Sbjct: 129 DDGLRSLGSQKQRQQFQQLLKKLLDKYKVPYIEIESPSYLDRYNQVKAVIEKVLN 183
>d2fu5c1 c.37.1.8 (C:3-175) Rab8a {Mouse (Mus musculus) [TaxId:
10090]}
Length = 173
Score = 30.1 bits (67), Expect = 0.14
Identities = 12/33 (36%), Positives = 17/33 (51%), Gaps = 1/33 (3%)
Query: 7 MLKAVIIGAPGCGKGTISSRII-DHFNVKHIAT 38
+ K ++IG G GK + R D FN I+T
Sbjct: 6 LFKLLLIGDSGVGKTCVLFRFSEDAFNSTFIST 38
>d1z2aa1 c.37.1.8 (A:8-171) Rab23 {Mouse (Mus musculus) [TaxId:
10090]}
Length = 164
Score = 29.7 bits (65), Expect = 0.16
Identities = 15/140 (10%), Positives = 28/140 (20%), Gaps = 5/140 (3%)
Query: 8 LKAVIIGAPGCGKGTISSRIIDHFNVKHIATGDILRSHIAQNTTLGLKA--KEYMNKGLL 65
+K V++G GK ++ R K + Q + G
Sbjct: 3 IKMVVVGNGAVGKSSMIQRYCKGIFTKDYKKTIGVDFLERQIQVNDEDVRLMLWDTAGQE 62
Query: 66 VPDDLMIDLVKNEVKDLKCNYLLDGFPRTYDQAMALFKNHLSPNCVMHINVPKEVIIDRL 125
D + + + D + + + ID L
Sbjct: 63 EFDAITKAYYRGAQACVLVFSTTDRESFEAISSWREKVVAEVGDIPTALVQN---KIDLL 119
Query: 126 SKRWIHPASGRVYNLDFNAP 145
I
Sbjct: 120 DDSCIKNEEAEGLAKRLKLR 139
>d1kmqa_ c.37.1.8 (A:) RhoA {Human (Homo sapiens) [TaxId: 9606]}
Length = 177
Score = 30.0 bits (66), Expect = 0.16
Identities = 10/33 (30%), Positives = 14/33 (42%), Gaps = 1/33 (3%)
Query: 8 LKAVIIGAPGCGKGTISSRII-DHFNVKHIATG 39
K VI+G CGK + D F ++ T
Sbjct: 3 KKLVIVGDGACGKTCLLIVNSKDQFPEVYVPTV 35
>d2atva1 c.37.1.8 (A:5-172) Ras-like estrogen-regulated growth
inhibitor, RERG {Human (Homo sapiens) [TaxId: 9606]}
Length = 168
Score = 30.0 bits (66), Expect = 0.17
Identities = 9/32 (28%), Positives = 14/32 (43%), Gaps = 1/32 (3%)
Query: 8 LKAVIIGAPGCGKGTISSRII-DHFNVKHIAT 38
+K I G G GK + R + F ++ T
Sbjct: 3 VKLAIFGRAGVGKSALVVRFLTKRFIWEYDPT 34
>d2bcgy1 c.37.1.8 (Y:3-196) GTPase Ytp1 {Baker's yeast
(Saccharomyces cerevisiae) [TaxId: 4932]}
Length = 194
Score = 29.8 bits (66), Expect = 0.17
Identities = 10/33 (30%), Positives = 17/33 (51%), Gaps = 1/33 (3%)
Query: 7 MLKAVIIGAPGCGKGTISSRII-DHFNVKHIAT 38
+ K ++IG G GK + R D + +I+T
Sbjct: 6 LFKLLLIGNSGVGKSCLLLRFSDDTYTNDYIST 38
>d1z06a1 c.37.1.8 (A:32-196) Rab-33b {Mouse (Mus musculus) [TaxId:
10090]}
Length = 165
Score = 29.6 bits (65), Expect = 0.20
Identities = 9/33 (27%), Positives = 15/33 (45%), Gaps = 1/33 (3%)
Query: 7 MLKAVIIGAPGCGKGTISSRII-DHFNVKHIAT 38
+ K ++IG GK ++ R F + AT
Sbjct: 2 IFKIIVIGDSNVGKTCLTYRFCAGRFPDRTEAT 34
>d1ksha_ c.37.1.8 (A:) ADP-ribosylation factor {Mouse (Mus
musculus), ARL2 [TaxId: 10090]}
Length = 165
Score = 29.3 bits (64), Expect = 0.25
Identities = 7/31 (22%), Positives = 12/31 (38%)
Query: 8 LKAVIIGAPGCGKGTISSRIIDHFNVKHIAT 38
L+ +++G GK TI + T
Sbjct: 3 LRLLMLGLDNAGKTTILKKFNGEDVDTISPT 33
>d2ew1a1 c.37.1.8 (A:4-174) Rab30 {Human (Homo sapiens) [TaxId:
9606]}
Length = 171
Score = 29.0 bits (64), Expect = 0.27
Identities = 11/33 (33%), Positives = 14/33 (42%), Gaps = 1/33 (3%)
Query: 7 MLKAVIIGAPGCGKGTISSRII-DHFNVKHIAT 38
+ K V+IG G GK + R F AT
Sbjct: 5 LFKIVLIGNAGVGKTCLVRRFTQGLFPPGQGAT 37
>d1zd9a1 c.37.1.8 (A:18-181) ADP-ribosylation factor {Human (Homo
sapiens), ARL8A [TaxId: 9606]}
Length = 164
Score = 29.3 bits (64), Expect = 0.28
Identities = 10/40 (25%), Positives = 15/40 (37%), Gaps = 1/40 (2%)
Query: 8 LKAVIIGAPGCGKGTISSRII-DHFNVKHIATGDILRSHI 46
++ ++G GK T + I FN I T I
Sbjct: 3 MELTLVGLQYSGKTTFVNVIASGQFNEDMIPTVGFNMRKI 42
>d2f9la1 c.37.1.8 (A:8-182) Rab11b {Human (Homo sapiens) [TaxId:
9606]}
Length = 175
Score = 29.1 bits (64), Expect = 0.29
Identities = 11/31 (35%), Positives = 17/31 (54%), Gaps = 1/31 (3%)
Query: 7 MLKAVIIGAPGCGKGTISSRII-DHFNVKHI 36
+ K V+IG G GK + SR + FN++
Sbjct: 4 LFKVVLIGDSGVGKSNLLSRFTRNEFNLESK 34
>d1m7ba_ c.37.1.8 (A:) RhoE (RND3) {Mouse (Mus musculus) [TaxId:
10090]}
Length = 179
Score = 29.2 bits (64), Expect = 0.29
Identities = 9/32 (28%), Positives = 14/32 (43%), Gaps = 1/32 (3%)
Query: 8 LKAVIIGAPGCGKGTISSRII-DHFNVKHIAT 38
K V++G CGK + D F ++ T
Sbjct: 3 CKIVVVGDSQCGKTALLHVFAKDCFPENYVPT 34
>d2qtvb1 c.37.1.8 (B:24-189) SAR1 {Baker's yeast (Saccharomyces
cerevisiae) [TaxId: 4932]}
Length = 166
Score = 28.9 bits (63), Expect = 0.30
Identities = 6/30 (20%), Positives = 11/30 (36%)
Query: 9 KAVIIGAPGCGKGTISSRIIDHFNVKHIAT 38
K + +G GK T+ + + T
Sbjct: 2 KLLFLGLDNAGKTTLLHMLKNDRLATLQPT 31
>d1kaga_ c.37.1.2 (A:) Shikimate kinase (AroK) {Escherichia coli
[TaxId: 562]}
Length = 169
Score = 28.9 bits (63), Expect = 0.32
Identities = 7/26 (26%), Positives = 13/26 (50%)
Query: 11 VIIGAPGCGKGTISSRIIDHFNVKHI 36
++G G GK TI ++ N++
Sbjct: 6 FLVGPMGAGKSTIGRQLAQQLNMEFY 31
>d2a5ja1 c.37.1.8 (A:9-181) Rab2b {Human (Homo sapiens) [TaxId:
9606]}
Length = 173
Score = 29.1 bits (64), Expect = 0.33
Identities = 10/33 (30%), Positives = 14/33 (42%), Gaps = 1/33 (3%)
Query: 7 MLKAVIIGAPGCGKGTISSRII-DHFNVKHIAT 38
+ K +IIG G GK + + F H T
Sbjct: 3 LFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLT 35
>d1znwa1 c.37.1.1 (A:20-201) Guanylate kinase {Mycobacterium
tuberculosis [TaxId: 1773]}
Length = 182
Score = 28.8 bits (63), Expect = 0.34
Identities = 25/178 (14%), Positives = 50/178 (28%), Gaps = 21/178 (11%)
Query: 11 VIIGAPGCGKGTISSRIIDHFNVKHIATGDILRSHIAQNTTLGLKAKEYMNKGLLVPDDL 70
V+ G GK T+ + + H + TT + E D
Sbjct: 6 VLSGPSAVGKSTVVRCLRERIPNLHFSVSA---------TTRAPRPGEVDGVDYHFIDPT 56
Query: 71 MIDLVKNEVKDLKCNYLLDGFPRTYDQAMALFKNHLSPNCVMHINVPKEVIIDRLSKRWI 130
+ ++ + L+ + G R+ A + + V+ + K
Sbjct: 57 RFQQLIDQGELLEWAEIHGGLHRSGTLAQPVRAAAATGVPVLIEVDLA--GARAIKKTMP 114
Query: 131 HPASGRVYNLDFNAPKKPGIDDITGEKLIQRDDDKPEAIKKRLETFDQTIKPLLDYYD 188
P +LI R + + I++RL+T + +D
Sbjct: 115 EA---------VTVFLAPPSWQDLQARLIGRGTETADVIQRRLDTARIELA-AQGDFD 162
>d1yzqa1 c.37.1.8 (A:14-177) Rab6 {Human (Homo sapiens) [TaxId:
9606]}
Length = 164
Score = 28.8 bits (63), Expect = 0.39
Identities = 10/31 (32%), Positives = 17/31 (54%), Gaps = 1/31 (3%)
Query: 9 KAVIIGAPGCGKGTISSRII-DHFNVKHIAT 38
K V +G GK ++ +R + D F+ + AT
Sbjct: 2 KLVFLGEQSVGKTSLITRFMYDSFDNTYQAT 32
>d2bmea1 c.37.1.8 (A:6-179) Rab4a {Human (Homo sapiens) [TaxId:
9606]}
Length = 174
Score = 28.7 bits (63), Expect = 0.40
Identities = 8/31 (25%), Positives = 13/31 (41%), Gaps = 1/31 (3%)
Query: 7 MLKAVIIGAPGCGKGTISSRII-DHFNVKHI 36
+ K ++IG G GK + + I F
Sbjct: 5 LFKFLVIGNAGTGKSCLLHQFIEKKFKDDSN 35
>d1upta_ c.37.1.8 (A:) ADP-ribosylation factor {Human (Homo
sapiens), ARL1 [TaxId: 9606]}
Length = 169
Score = 28.5 bits (62), Expect = 0.43
Identities = 16/139 (11%), Positives = 42/139 (30%), Gaps = 3/139 (2%)
Query: 8 LKAVIIGAPGCGKGTISSRII-DHFNVKHIATGDILRSHIAQNTTLGLKAKEYMNKGLLV 66
++ +I+G G GK TI R+ G + + +N + +
Sbjct: 6 MRILILGLDGAGKTTILYRLQVGEVVTTIPTIGFNVETVTYKNLKFQVWDLGGLTSIRPY 65
Query: 67 PDDLMIDLVKNEVKDLKCNYLLDGFPRTYDQAMALFKNHLSPNCVMHINVPKEVIIDRLS 126
+ C+ D + + +A+ + ++ + K+ + ++
Sbjct: 66 WRCYYSNTDAVIYVVDSCDR--DRIGISKSELVAMLEEEELRKAILVVFANKQDMEQAMT 123
Query: 127 KRWIHPASGRVYNLDFNAP 145
+ + G D
Sbjct: 124 SSEMANSLGLPALKDRKWQ 142
>d2erxa1 c.37.1.8 (A:6-176) di-Ras2 {Human (Homo sapiens) [TaxId:
9606]}
Length = 171
Score = 28.4 bits (62), Expect = 0.44
Identities = 10/64 (15%), Positives = 20/64 (31%), Gaps = 1/64 (1%)
Query: 9 KAVIIGAPGCGKGTISSRII-DHFNVKHIATGDILRSHIAQNTTLGLKAKEYMNKGLLVP 67
+ + GA G GK ++ R + F +I T + + + G
Sbjct: 4 RVAVFGAGGVGKSSLVLRFVKGTFRESYIPTVEDTYRQVISCDKSICTLQITDTTGSHQF 63
Query: 68 DDLM 71
+
Sbjct: 64 PAMQ 67
>d1zj6a1 c.37.1.8 (A:2-178) ADP-ribosylation factor {Human (Homo
sapiens), ARL5A [TaxId: 9606]}
Length = 177
Score = 28.4 bits (62), Expect = 0.46
Identities = 10/39 (25%), Positives = 14/39 (35%)
Query: 8 LKAVIIGAPGCGKGTISSRIIDHFNVKHIATGDILRSHI 46
K +I+G GK TI + + V T I
Sbjct: 16 HKVIIVGLDNAGKTTILYQFSMNEVVHTSPTIGSNVEEI 54
>d3raba_ c.37.1.8 (A:) Rab3a {Rat (Rattus norvegicus) [TaxId:
10116]}
Length = 169
Score = 28.7 bits (63), Expect = 0.46
Identities = 10/31 (32%), Positives = 13/31 (41%), Gaps = 1/31 (3%)
Query: 7 MLKAVIIGAPGCGKGTISSRII-DHFNVKHI 36
M K +IIG GK + R D F +
Sbjct: 5 MFKILIIGNSSVGKTSFLFRYADDSFTPAFV 35
>d4tmka_ c.37.1.1 (A:) Thymidylate kinase {Escherichia coli [TaxId:
562]}
Length = 210
Score = 28.7 bits (63), Expect = 0.46
Identities = 22/216 (10%), Positives = 61/216 (28%), Gaps = 18/216 (8%)
Query: 11 VIIGAPGCGKGTISSRIIDHFNVKHIATGDILR----SHIAQNTTLGLKAKEYMNKGLLV 66
VI G G GK T + +++ I R + +A+ L + + ++
Sbjct: 6 VIEGLEGAGKTTARNVVVETLEQLGIRDMVFTREPGGTQLAEKLRSLLLDIKSVGDEVIT 65
Query: 67 PD---DLMIDLVKNEVKDLKCNYLLDGFPRTYDQAMALFKNHLSPNCVMHINVPKEVIID 123
+ V+ + L +G D+ + + + + ++
Sbjct: 66 DKAEVLMFYAARVQLVETVIKPALANGTWVIGDRHDLSTQAYQGGGRGIDQH-----MLA 120
Query: 124 RLSKRWIHPASGRVYNLDFNAPKKPGIDDITGEKLIQRDDDKPEAIKKRLETFDQTIKPL 183
L + + P+ +L + + + + + + + L
Sbjct: 121 TLRDAVLGDFRPDLTLYLDVTPEVGLKRARARGELDRIEQESFDFFNRTRARYLE----L 176
Query: 184 LDYYDNREVLDTFTGNTTDEIWPRIYEHLNIRIPPL 219
+ +D + + I + + L
Sbjct: 177 AAQDKSIHTID--ATQPLEAVMDAIRTTVTHWVKEL 210
>d1x3sa1 c.37.1.8 (A:2-178) Rab18 {Human (Homo sapiens) [TaxId:
9606]}
Length = 177
Score = 28.3 bits (62), Expect = 0.51
Identities = 11/26 (42%), Positives = 14/26 (53%)
Query: 5 LLMLKAVIIGAPGCGKGTISSRIIDH 30
L LK +IIG G GK ++ R D
Sbjct: 5 LTTLKILIIGESGVGKSSLLLRFTDD 30
>d1p6xa_ c.37.1.1 (A:) Thymidine kinase {Equine herpesvirus type 4
[TaxId: 10331]}
Length = 333
Score = 28.8 bits (64), Expect = 0.57
Identities = 6/37 (16%), Positives = 10/37 (27%)
Query: 92 PRTYDQAMALFKNHLSPNCVMHINVPKEVIIDRLSKR 128
+A ++ + E I RL R
Sbjct: 141 MCALMAMVATLPREPQGGNIVVTTLNVEEHIRRLRTR 177
>d1fzqa_ c.37.1.8 (A:) ADP-ribosylation factor {Mouse (Mus
musculus), ARL3 [TaxId: 10090]}
Length = 176
Score = 28.0 bits (61), Expect = 0.61
Identities = 5/31 (16%), Positives = 13/31 (41%)
Query: 8 LKAVIIGAPGCGKGTISSRIIDHFNVKHIAT 38
++ +++G GK T+ ++ T
Sbjct: 17 VRILLLGLDNAGKTTLLKQLASEDISHITPT 47
>d1t9ha2 c.37.1.8 (A:68-298) Probable GTPase EngC (YjeQ), C-terminal
domain {Bacillus subtilis [TaxId: 1423]}
Length = 231
Score = 28.2 bits (62), Expect = 0.67
Identities = 16/123 (13%), Positives = 37/123 (30%), Gaps = 11/123 (8%)
Query: 11 VIIGAPGCGKGTISSRIIDHFNVKHIATGDILRSHIAQNTTLGLKAKEYMNKGLLVPDDL 70
V G G GK ++ + I ++ + + H+ + + G LV D
Sbjct: 101 VFAGQSGVGKSSLLNAISPELGLR----TNEISEHLGRGKHTTRHVELIHTSGGLVADTP 156
Query: 71 MIDLVKNEVKDLKCNYLLDGFPRTYDQAMALFKNHLSPNCVMHINVPKEVIIDRLSKRWI 130
++ + + T+ + C +H+ PK + + +
Sbjct: 157 GFSSLEFTDIE------EEELGYTFPDIREKSSSCKFRGC-LHLKEPKCAVKQAVEDGEL 209
Query: 131 HPA 133
Sbjct: 210 KQY 212
>d1osna_ c.37.1.1 (A:) Thymidine kinase {Varicella-zoster virus
[TaxId: 10335]}
Length = 331
Score = 28.4 bits (63), Expect = 0.68
Identities = 6/37 (16%), Positives = 11/37 (29%)
Query: 92 PRTYDQAMALFKNHLSPNCVMHINVPKEVIIDRLSKR 128
P + ++ V + R+SKR
Sbjct: 144 PAALPGLLFTLPAEPPGTNLVVCTVSLPSHLSRVSKR 180
>d1z08a1 c.37.1.8 (A:17-183) Rab21 {Human (Homo sapiens) [TaxId:
9606]}
Length = 167
Score = 28.0 bits (61), Expect = 0.69
Identities = 11/31 (35%), Positives = 16/31 (51%), Gaps = 1/31 (3%)
Query: 7 MLKAVIIGAPGCGKGTISSRII-DHFNVKHI 36
K V++G GK ++ R + FN KHI
Sbjct: 3 SFKVVLLGEGCVGKTSLVLRYCENKFNDKHI 33
>d1np6a_ c.37.1.10 (A:) Molybdopterin-guanine dinucleotide
biosynthesis protein MobB {Escherichia coli [TaxId:
562]}
Length = 170
Score = 28.0 bits (61), Expect = 0.69
Identities = 10/50 (20%), Positives = 17/50 (34%)
Query: 11 VIIGAPGCGKGTISSRIIDHFNVKHIATGDILRSHIAQNTTLGLKAKEYM 60
G GK T+ ++I + I G I +H + K +
Sbjct: 6 AFAAWSGTGKTTLLKKLIPALCARGIRPGLIKHTHHDMDVDKPGKDSYEL 55
>d1m8pa3 c.37.1.15 (A:391-573) ATP sulfurylase C-terminal domain
{Fungus (Penicillium chrysogenum) [TaxId: 5076]}
Length = 183
Score = 28.1 bits (61), Expect = 0.74
Identities = 16/187 (8%), Positives = 43/187 (22%), Gaps = 20/187 (10%)
Query: 12 IIGAPGCGKGTISSRIIDHFNVKHIATGDILRSHIAQNTTLGLKAKEYMNKGLLVPDDLM 71
+ G GK I+ + N + + L L + +
Sbjct: 11 LTGYMNSGKDAIARALQVTLNQQGGRS-VSLLLGDTVRHELSSELGFTREDRHTNIQRIA 69
Query: 72 IDLVKNEVKDLKCNYLLDGFPRTYDQAMALFKNHLSPNCVMHINVPKEVIIDRLSKRWIH 131
+ + + ++H+ P E +
Sbjct: 70 FVATELTRAGAAVIAAPIAPYEESRKFARDAVSQAGSFFLVHVATPLEHCEQSDKRGI-- 127
Query: 132 PASGRVYNLDFNAPKKPGIDDITGEKLIQRDDDKPEAIKKRLETFDQTI----KPLLDYY 187
+I G + + PE ++ Q++ ++
Sbjct: 128 -------------YAAARRGEIKGFTGVDDPYETPEKADLVVDFSKQSVRSIVHEIILVL 174
Query: 188 DNREVLD 194
+++ L+
Sbjct: 175 ESQGFLE 181
>d1moza_ c.37.1.8 (A:) ADP-ribosylation factor {Baker's yeast
(Saccharomyces cerevisiae), ARL1 [TaxId: 4932]}
Length = 182
Score = 28.0 bits (61), Expect = 0.80
Identities = 11/34 (32%), Positives = 15/34 (44%)
Query: 8 LKAVIIGAPGCGKGTISSRIIDHFNVKHIATGDI 41
L+ +I+G G GK TI R+ V T
Sbjct: 18 LRILILGLDGAGKTTILYRLQIGEVVTTKPTIGF 51
>d1nt2a_ c.66.1.3 (A:) Fibrillarin homologue {Archaeon Archaeoglobus
fulgidus [TaxId: 2234]}
Length = 209
Score = 27.7 bits (61), Expect = 0.82
Identities = 18/115 (15%), Positives = 30/115 (26%), Gaps = 3/115 (2%)
Query: 17 GCGKGTISSRIIDHFNVKHIATGDILRSHIAQNTTLGLKAKEYMNKGLLVPDDLMIDLVK 76
G GT S + D + I + + L +E N L+ D
Sbjct: 64 GAASGTTVSHLADIVDEGIIYAVEYSAKPFEK---LLELVRERNNIIPLLFDASKPWKYS 120
Query: 77 NEVKDLKCNYLLDGFPRTYDQAMALFKNHLSPNCVMHINVPKEVIIDRLSKRWIH 131
V+ + Y + A + L + I V I +
Sbjct: 121 GIVEKVDLIYQDIAQKNQIEILKANAEFFLKEKGEVVIMVKARSIDSTAEPEEVF 175
>d1u0la2 c.37.1.8 (A:69-293) Probable GTPase EngC (YjeQ), C-terminal
domain {Thermotoga maritima [TaxId: 2336]}
Length = 225
Score = 27.8 bits (61), Expect = 0.88
Identities = 5/36 (13%), Positives = 13/36 (36%), Gaps = 3/36 (8%)
Query: 10 AVIIGAPGCGKGTISSRIIDHFNVKHIATGDILRSH 45
+ + G G GK ++ + I + ++
Sbjct: 98 STMAGLSGVGKSSLLNAINPGLK---LRVSEVSEKL 130
>d1htjf_ a.91.1.1 (F:) Pdz-RhoGEF RGS-like domain {Human (Homo
sapiens) [TaxId: 9606]}
Length = 182
Score = 27.5 bits (61), Expect = 0.88
Identities = 16/104 (15%), Positives = 36/104 (34%), Gaps = 19/104 (18%)
Query: 98 AMALFKNHLSPNCVMHINVPKEV---IIDRL-----SKRWIHPASGRVYNL------DFN 143
++ L N + + +P+ + I RL ++ + A D+
Sbjct: 56 GKDIWNIFLEKNAPLRVKIPEMLQAEIDSRLRNSEDARGVLCEAQEAAMPEIQEQIHDYR 115
Query: 144 APKKPGIDDITGE-KLIQRDDDKPEAIKKRLETFDQTIKPLLDY 186
+ G+ + GE L+ D D + + ++ + L D
Sbjct: 116 TKRTLGLGSLYGENDLLDLDGDP----LRERQVAEKQLAALGDI 155
>d1f6ba_ c.37.1.8 (A:) SAR1 {Chinese hamster (Cricetulus griseus)
[TaxId: 10029]}
Length = 186
Score = 27.7 bits (60), Expect = 0.92
Identities = 8/29 (27%), Positives = 13/29 (44%)
Query: 8 LKAVIIGAPGCGKGTISSRIIDHFNVKHI 36
K V +G GK T+ + D +H+
Sbjct: 14 GKLVFLGLDNAGKTTLLHMLKDDRLGQHV 42
>d2bmja1 c.37.1.8 (A:66-240) Centaurin gamma 1, G domain {Human
(Homo sapiens) [TaxId: 9606]}
Length = 175
Score = 27.6 bits (60), Expect = 0.94
Identities = 6/33 (18%), Positives = 13/33 (39%), Gaps = 1/33 (3%)
Query: 8 LKAVIIGAPGCGKGTISSRII-DHFNVKHIATG 39
L+ ++G GK ++ R + + V
Sbjct: 6 LRLGVLGDARSGKSSLIHRFLTGSYQVLEKTES 38
>d1r2qa_ c.37.1.8 (A:) Rab5a {Human (Homo sapiens) [TaxId: 9606]}
Length = 170
Score = 27.7 bits (60), Expect = 0.94
Identities = 8/34 (23%), Positives = 15/34 (44%), Gaps = 1/34 (2%)
Query: 3 NTLLMLKAVIIGAPGCGKGTISSRII-DHFNVKH 35
N + K V++G GK ++ R + F+
Sbjct: 2 NKICQFKLVLLGESAVGKSSLVLRFVKGQFHEFQ 35
>d1u8za_ c.37.1.8 (A:) Ras-related protein RalA {Cotton-top
tamarin (Saguinus oedipus) [TaxId: 9490]}
Length = 168
Score = 27.6 bits (60), Expect = 1.0
Identities = 8/34 (23%), Positives = 19/34 (55%), Gaps = 1/34 (2%)
Query: 4 TLLMLKAVIIGAPGCGKGTISSRII-DHFNVKHI 36
+L + K +++G+ G GK ++ + + D F +
Sbjct: 1 SLALHKVIMVGSGGVGKSALTLQFMYDEFVEDYE 34
>d1uj2a_ c.37.1.6 (A:) Uridine-cytidine kinase 2 {Human (Homo
sapiens) [TaxId: 9606]}
Length = 213
Score = 27.6 bits (60), Expect = 1.0
Identities = 5/37 (13%), Positives = 14/37 (37%)
Query: 12 IIGAPGCGKGTISSRIIDHFNVKHIATGDILRSHIAQ 48
+ G GK ++ ++I+ + ++Q
Sbjct: 7 VSGGTASGKSSVCAKIVQLLGQNEVDYRQKQVVILSQ 43
>d1s96a_ c.37.1.1 (A:) Guanylate kinase {Escherichia coli [TaxId:
562]}
Length = 205
Score = 27.5 bits (60), Expect = 1.0
Identities = 3/27 (11%), Positives = 10/27 (37%)
Query: 11 VIIGAPGCGKGTISSRIIDHFNVKHIA 37
++ G GK ++ ++ +
Sbjct: 6 IVSAPSGAGKSSLIQALLKTQPLYDTQ 32
>d1e0sa_ c.37.1.8 (A:) ADP-ribosylation factor {Human (Homo
sapiens), ARF6 [TaxId: 9606]}
Length = 173
Score = 27.2 bits (59), Expect = 1.1
Identities = 7/29 (24%), Positives = 15/29 (51%)
Query: 8 LKAVIIGAPGCGKGTISSRIIDHFNVKHI 36
++ +++G GK TI ++ +V I
Sbjct: 13 MRILMLGLDAAGKTTILYKLKLGQSVTTI 41
>d1z0fa1 c.37.1.8 (A:8-173) Rab14 {Human (Homo sapiens) [TaxId:
9606]}
Length = 166
Score = 27.5 bits (60), Expect = 1.1
Identities = 8/31 (25%), Positives = 12/31 (38%), Gaps = 1/31 (3%)
Query: 7 MLKAVIIGAPGCGKGTISSRII-DHFNVKHI 36
+ K +IIG G GK + + F
Sbjct: 4 IFKYIIIGDMGVGKSCLLHQFTEKKFMADCP 34
>d1yrba1 c.37.1.10 (A:1-244) ATP(GTP)-binding protein PAB0955
{Pyrococcus abyssi [TaxId: 29292]}
Length = 244
Score = 27.6 bits (60), Expect = 1.1
Identities = 11/111 (9%), Positives = 31/111 (27%), Gaps = 15/111 (13%)
Query: 11 VIIGAPGCGKGTISSRIIDHFNVKHIATGDILRSHIAQNTTLGLKAKEYMNKGLLVPDDL 70
V +G G GK T++ + + + +T + + +
Sbjct: 4 VFVGTAGSGKTTLTGEFGRYLEDNYKVAY------VNLDT-----GVKELPYEPSIDVRE 52
Query: 71 MIDLVKNEVKDLK----CNYLLDGFPRTYDQAMALFKNHLSPNCVMHINVP 117
+ + + + D +++ + N + I+ P
Sbjct: 53 FVTVEEIMREGYGPNGAIVESYDRLMEKFNEYLNKILRLEKENDYVLIDTP 103
>d1ek0a_ c.37.1.8 (A:) Ypt51 {Baker's yeast (Saccharomyces
cerevisiae) [TaxId: 4932]}
Length = 170
Score = 27.3 bits (59), Expect = 1.2
Identities = 7/22 (31%), Positives = 12/22 (54%)
Query: 8 LKAVIIGAPGCGKGTISSRIID 29
+K V++G GK +I R +
Sbjct: 4 IKLVLLGEAAVGKSSIVLRFVS 25
>d1z0ja1 c.37.1.8 (A:2-168) Rab-22a {Mouse (Mus musculus) [TaxId:
10090]}
Length = 167
Score = 27.3 bits (59), Expect = 1.3
Identities = 10/29 (34%), Positives = 15/29 (51%), Gaps = 1/29 (3%)
Query: 8 LKAVIIGAPGCGKGTISSRII-DHFNVKH 35
LK ++G G GK +I R + D F+
Sbjct: 5 LKVCLLGDTGVGKSSIMWRFVEDSFDPNI 33
>d1kgda_ c.37.1.1 (A:) Guanylate kinase-like domain of Cask {Human
(Homo sapiens) [TaxId: 9606]}
Length = 178
Score = 27.1 bits (59), Expect = 1.3
Identities = 7/21 (33%), Positives = 12/21 (57%)
Query: 11 VIIGAPGCGKGTISSRIIDHF 31
V++GA G G+ I + +I
Sbjct: 7 VLLGAHGVGRRHIKNTLITKH 27
>d1mh1a_ c.37.1.8 (A:) Rac {Human (Homo sapiens) [TaxId: 9606]}
Length = 183
Score = 27.3 bits (59), Expect = 1.4
Identities = 7/30 (23%), Positives = 14/30 (46%), Gaps = 1/30 (3%)
Query: 8 LKAVIIGAPGCGKGTISSRII-DHFNVKHI 36
+K V++G GK + + F ++I
Sbjct: 6 IKCVVVGDGAVGKTCLLISYTTNAFPGEYI 35
>d1epwa3 d.92.1.7 (A:1-533) Botulinum neurotoxin {Clostridium
botulinum, serotype B [TaxId: 1491]}
Length = 533
Score = 27.5 bits (61), Expect = 1.5
Identities = 8/33 (24%), Positives = 11/33 (33%)
Query: 138 YNLDFNAPKKPGIDDITGEKLIQRDDDKPEAIK 170
LD + K + E L + D P K
Sbjct: 490 LILDTDLISKIELPSENTESLTDFNVDVPVYEK 522
>d2g6ba1 c.37.1.8 (A:58-227) Rab26 {Human (Homo sapiens) [TaxId:
9606]}
Length = 170
Score = 26.8 bits (58), Expect = 1.6
Identities = 7/23 (30%), Positives = 11/23 (47%)
Query: 7 MLKAVIIGAPGCGKGTISSRIID 29
K +++G G GK + R D
Sbjct: 6 AFKVMLVGDSGVGKTCLLVRFKD 28
>d1ctqa_ c.37.1.8 (A:) cH-p21 Ras protein {Human (Homo sapiens)
[TaxId: 9606]}
Length = 166
Score = 26.9 bits (58), Expect = 1.7
Identities = 10/30 (33%), Positives = 19/30 (63%), Gaps = 1/30 (3%)
Query: 9 KAVIIGAPGCGKGTISSRII-DHFNVKHIA 37
K V++GA G GK ++ ++I +HF ++
Sbjct: 5 KLVVVGAGGVGKSALTIQLIQNHFVDEYDP 34
>d1i2ma_ c.37.1.8 (A:) Ran {Human (Homo sapiens) [TaxId: 9606]}
Length = 170
Score = 26.9 bits (58), Expect = 1.8
Identities = 10/29 (34%), Positives = 15/29 (51%), Gaps = 1/29 (3%)
Query: 9 KAVIIGAPGCGKGTISSRII-DHFNVKHI 36
K V++G G GK T R + F K++
Sbjct: 5 KLVLVGDGGTGKTTFVKRHLTGEFEKKYV 33
>d2fn4a1 c.37.1.8 (A:24-196) r-Ras {Human (Homo sapiens) [TaxId:
9606]}
Length = 173
Score = 26.9 bits (58), Expect = 1.8
Identities = 10/39 (25%), Positives = 19/39 (48%), Gaps = 1/39 (2%)
Query: 9 KAVIIGAPGCGKGTISSRII-DHFNVKHIATGDILRSHI 46
K V++G G GK ++ + I +F + T + + I
Sbjct: 8 KLVVVGGGGVGKSALTIQFIQSYFVSDYDPTIEDSYTKI 46
>d1xtqa1 c.37.1.8 (A:3-169) GTP-binding protein RheB {Human (Homo
sapiens) [TaxId: 9606]}
Length = 167
Score = 26.6 bits (57), Expect = 1.8
Identities = 5/22 (22%), Positives = 12/22 (54%)
Query: 8 LKAVIIGAPGCGKGTISSRIID 29
K I+G GK +++ + ++
Sbjct: 5 RKIAILGYRSVGKSSLTIQFVE 26
>d1svsa1 c.37.1.8 (A:32-60,A:182-347) Transducin (alpha subunit)
{Rat (Rattus norvegicus) [TaxId: 10116]}
Length = 195
Score = 26.5 bits (57), Expect = 2.4
Identities = 16/110 (14%), Positives = 35/110 (31%), Gaps = 1/110 (0%)
Query: 8 LKAVIIGAPGCGKGTISSRI-IDHFNVKHIATGDILRSHIAQNTTLGLKAKEYMNKGLLV 66
+K +++GA GK TI ++ I H I + + K +
Sbjct: 3 VKLLLLGAGESGKSTIVKQMKIIHEAGTGIVETHFTFKDLHFKMFDVGGQRSERKKWIHC 62
Query: 67 PDDLMIDLVKNEVKDLKCNYLLDGFPRTYDQAMALFKNHLSPNCVMHINV 116
+ + + + D D ++M LF + + ++
Sbjct: 63 FEGVTAIIFCVALSDYDLVLAEDEEMNRMHESMKLFDSICNNKWFTDTSI 112
>d2erya1 c.37.1.8 (A:10-180) r-Ras2 {Human (Homo sapiens) [TaxId:
9606]}
Length = 171
Score = 26.5 bits (57), Expect = 2.4
Identities = 7/29 (24%), Positives = 15/29 (51%), Gaps = 1/29 (3%)
Query: 9 KAVIIGAPGCGKGTISSRII-DHFNVKHI 36
+ V++G G GK ++ + I +F +
Sbjct: 7 RLVVVGGGGVGKSALTIQFIQSYFVTDYD 35
>d2g3ya1 c.37.1.8 (A:73-244) GTP-binding protein GEM {Human (Homo
sapiens) [TaxId: 9606]}
Length = 172
Score = 26.3 bits (56), Expect = 2.5
Identities = 13/125 (10%), Positives = 35/125 (28%), Gaps = 4/125 (3%)
Query: 9 KAVIIGAPGCGKGTISSRIID-HFNVKHIATGDILRSHIAQNTTLGLKAKEYMNKGLLVP 67
+ V+IG G GK T+++ H ++ ++ G A + +
Sbjct: 5 RVVLIGEQGVGKSTLANIFAGVHDSMDSDCEVLGEDTYERTLMVDGESATIILLD---MW 61
Query: 68 DDLMIDLVKNEVKDLKCNYLLDGFPRTYDQAMALFKNHLSPNCVMHINVPKEVIIDRLSK 127
++ + ++ + L + T + +I+
Sbjct: 62 ENKGENEWLHDHCMQVGDAYLIVYSITDRASFEKASELRIQLRRARQTEDIPIILVGNKS 121
Query: 128 RWIHP 132
+
Sbjct: 122 DLVRC 126
>d1ye8a1 c.37.1.11 (A:1-178) Hypothetical kinase-like protein
Aq_1292 {Aquifex aeolicus [TaxId: 63363]}
Length = 178
Score = 26.5 bits (57), Expect = 2.6
Identities = 17/99 (17%), Positives = 32/99 (32%), Gaps = 2/99 (2%)
Query: 8 LKAVIIGAPGCGKGTISSRIIDHFNVK--HIATGDILRSHIAQNTTLGLKAKEYMNKGLL 65
+K +I G PG GK T+ +I++ + T ++ + T + E K
Sbjct: 1 MKIIITGEPGVGKTTLVKKIVERLGKRAIGFWTEEVRDPETKKRTGFRIITTEGKKKIFS 60
Query: 66 VPDDLMIDLVKNEVKDLKCNYLLDGFPRTYDQAMALFKN 104
LV + +++ L A
Sbjct: 61 SKFFTSKKLVGSYGVNVQYFEELAIPILERAYREAKKDR 99
>d2fh5b1 c.37.1.8 (B:63-269) Signal recognition particle receptor
beta-subunit {Mouse (Mus musculus) [TaxId: 10090]}
Length = 207
Score = 26.5 bits (57), Expect = 2.7
Identities = 4/28 (14%), Positives = 10/28 (35%)
Query: 11 VIIGAPGCGKGTISSRIIDHFNVKHIAT 38
+ +G GK + R++ +
Sbjct: 4 LFVGLCDSGKTLLFVRLLTGQYRDTQTS 31
>d2qm8a1 c.37.1.10 (A:5-327) Metallochaperone MeaB {Methylobacterium
extorquens [TaxId: 408]}
Length = 323
Score = 26.4 bits (57), Expect = 2.9
Identities = 26/212 (12%), Positives = 51/212 (24%), Gaps = 11/212 (5%)
Query: 12 IIGAPGCGKGTISSRIIDHFNVKHIATGDILRSHIAQNTTLGLKAKEYMNKGLLVPDDLM 71
I G PG GK T + + + T + L
Sbjct: 56 ITGVPGVGKSTTIDALGSLLTAAGHKVAVLAVDPSSTRT------GGSILGDKTRMARLA 109
Query: 72 IDLVKNEVKDLKCNYLLDGFPRTYDQAMALFKNHLSPNCVMHINVP-KEVIIDRLSKRWI 130
ID L +T + + V + V E + L+ ++
Sbjct: 110 IDRNAFIRPSPSSGTLGGVAAKTRETMLLCEAAGFDVILVETVGVGQSETAVADLTDFFL 169
Query: 131 HPASGRVYNLDFNAPKKPGIDDITGEKLIQR-DDDKPEAIKKRLETFDQTIKPLLDYYDN 189
+ K GI ++ + + DD E + + +L
Sbjct: 170 -VLMLPGAGDELQG-IKKGIFELADMIAVNKADDGDGERRASAAASEYRAALHILTPPSA 227
Query: 190 REVLDTFTGN-TTDEIWPRIYEHLNIRIPPLK 220
T + + ++ + L
Sbjct: 228 TWTPPVVTISGLHGKGLDSLWSRIEDHRSKLT 259
>d1x1ra1 c.37.1.8 (A:10-178) Ras-related protein M-Ras (XRas) {Mouse
(Mus musculus) [TaxId: 10090]}
Length = 169
Score = 26.2 bits (56), Expect = 3.0
Identities = 14/137 (10%), Positives = 31/137 (22%)
Query: 9 KAVIIGAPGCGKGTISSRIIDHFNVKHIATGDILRSHIAQNTTLGLKAKEYMNKGLLVPD 68
K V++G G GK ++ + V + ++
Sbjct: 6 KLVVVGDGGVGKSALTIQFFQKIFVPDYDPTIEDSYLKHTEIDNQWAILDVLDTAGQEEF 65
Query: 69 DLMIDLVKNEVKDLKCNYLLDGFPRTYDQAMALFKNHLSPNCVMHINVPKEVIIDRLSKR 128
M + Y + + + +D + R
Sbjct: 66 SAMREQYMRTGDGFLIVYSVTDKASFEHVDRFHQLILRVKDRESFPMILVANKVDLMHLR 125
Query: 129 WIHPASGRVYNLDFNAP 145
+ G+ +N P
Sbjct: 126 KVTRDQGKEMATKYNIP 142
>d1odfa_ c.37.1.6 (A:) Hypothetical protein Ygr205W {Baker's yeast
(Saccharomyces cerevisiae) [TaxId: 4932]}
Length = 286
Score = 26.3 bits (57), Expect = 3.1
Identities = 19/124 (15%), Positives = 37/124 (29%), Gaps = 12/124 (9%)
Query: 12 IIGAPGCGKGTISSRIIDHFNVKH--------IATGDILRSHIAQNTTLGLKAKEYMNKG 63
G G GK S +I +H K+ + D +H Q + +G
Sbjct: 32 FSGPQGSGKSFTSIQIYNHLMEKYGGEKSIGYASIDDFYLTHEDQLKLNEQFKNNKLLQG 91
Query: 64 LLVPDDLMIDLVKNEVKDLKCNYLLDGFPR----TYDQAMALFKNHLSPNCVMHINVPKE 119
+P + L++ + + N YD++ + P
Sbjct: 92 RGLPGTHDMKLLQEVLNTIFNNNEHPDQDTVVLPKYDKSQFKGEGDRCPTGQKIKLPVDI 151
Query: 120 VIID 123
I++
Sbjct: 152 FILE 155
>d1c1ya_ c.37.1.8 (A:) Rap1A {Human (Homo sapiens) [TaxId: 9606]}
Length = 167
Score = 26.1 bits (56), Expect = 3.3
Identities = 8/30 (26%), Positives = 16/30 (53%), Gaps = 1/30 (3%)
Query: 9 KAVIIGAPGCGKGTISSRII-DHFNVKHIA 37
K V++G+ G GK ++ + + F K+
Sbjct: 5 KLVVLGSGGVGKSALTVQFVQGIFVEKYDP 34
>d1kaoa_ c.37.1.8 (A:) Rap2a {Human (Homo sapiens) [TaxId: 9606]}
Length = 167
Score = 26.0 bits (56), Expect = 3.4
Identities = 8/30 (26%), Positives = 16/30 (53%), Gaps = 1/30 (3%)
Query: 9 KAVIIGAPGCGKGTISSRII-DHFNVKHIA 37
K V++G+ G GK ++ + + F K+
Sbjct: 5 KVVVLGSGGVGKSALTVQFVTGTFIEKYDP 34
>d1xjca_ c.37.1.10 (A:) Molybdopterin-guanine dinucleotide
biosynthesis protein MobB {Bacillus stearothermophilus
[TaxId: 1422]}
Length = 165
Score = 26.0 bits (56), Expect = 3.5
Identities = 5/34 (14%), Positives = 12/34 (35%)
Query: 12 IIGAPGCGKGTISSRIIDHFNVKHIATGDILRSH 45
++G GK T+ + + + G +
Sbjct: 6 VVGYKHSGKTTLMEKWVAAAVREGWRVGTVKHHG 39
>d1a7ja_ c.37.1.6 (A:) Phosphoribulokinase {Rhodobacter
sphaeroides [TaxId: 1063]}
Length = 288
Score = 26.1 bits (57), Expect = 3.9
Identities = 8/79 (10%), Positives = 20/79 (25%), Gaps = 7/79 (8%)
Query: 12 IIGAPGCGKGTISSRIIDHF-----NVKHIATGDILRSHIAQNTTLGLKAKEYMNKGL-- 64
+ G+ G G T+ F I R + A + +
Sbjct: 9 VTGSSGAGTSTVKHTFDQIFRREGVKAVSIEGDAFHRFNRADMKAELDRRYAAGDATFSH 68
Query: 65 LVPDDLMIDLVKNEVKDLK 83
+ + ++ ++
Sbjct: 69 FSYEANELKELERVFREYG 87
>d1tmka_ c.37.1.1 (A:) Thymidylate kinase {Baker's yeast
(Saccharomyces cerevisiae) [TaxId: 4932]}
Length = 214
Score = 25.6 bits (55), Expect = 4.3
Identities = 25/217 (11%), Positives = 58/217 (26%), Gaps = 18/217 (8%)
Query: 11 VIIGAPGCGKGTISSRIIDHFNVKHIATGDILRSHIAQNTTLGLKAKEYMNKGLLVPDDL 70
+I G GK T + + ++T +G EY+ D
Sbjct: 7 LIEGLDRTGKTTQCNILYKKLQPNCKLL-----KFPERSTRIGGLINEYLTDDSFQLSDQ 61
Query: 71 MIDLVKNEVKDLKCNYLLDGFPRTYDQAMALFKNHLSPNCVMHINVPKEVIIDRLSKRWI 130
I L+ + + + + + M + + + L
Sbjct: 62 AIHLLFSANRWEIVDKIKKDLLEGKNIVMDRY-VYSGVAYSAAKGTNGMDLDWCLQPDVG 120
Query: 131 HPASGRVYNLDFNAPKKPGIDDITGEKLIQRDDDKPEAI---KKRLETFDQTIKPLLDYY 187
L D + D++ E + +K +TF + + +
Sbjct: 121 LLKPDLTLFLSTQ-------DVDNNAEKSGFGDERYETVKFQEKVKQTFMKLLDKEIRKG 173
Query: 188 DNREVLDTFTGNTTDEIWPRIYEHLNIRIPPLKRLEP 224
D + T E+ I++ + + ++
Sbjct: 174 DESITIVDVTNKGIQEVEALIWQIVEPVLS--THIDH 208
>d1cuna2 a.7.1.1 (A:116-219) Spectrin alpha chain {Chicken (Gallus
gallus) [TaxId: 9031]}
Length = 104
Score = 24.9 bits (54), Expect = 5.1
Identities = 8/38 (21%), Positives = 17/38 (44%)
Query: 154 TGEKLIQRDDDKPEAIKKRLETFDQTIKPLLDYYDNRE 191
GE LI++++ E I +++ + L R+
Sbjct: 59 NGEDLIKKNNHHVENITAKMKGLKGKVSDLEKAAAQRK 96
>d1u5pa2 a.7.1.1 (A:1772-1872) Spectrin alpha chain {Chicken (Gallus
gallus) [TaxId: 9031]}
Length = 101
Score = 24.6 bits (53), Expect = 5.5
Identities = 12/37 (32%), Positives = 16/37 (43%)
Query: 154 TGEKLIQRDDDKPEAIKKRLETFDQTIKPLLDYYDNR 190
TG+KL + E I++RL F K L R
Sbjct: 60 TGKKLSDDNTIGKEEIQQRLAQFVDHWKELKQLAAAR 96
>d1x6va3 c.37.1.4 (A:34-228) Adenosine-5'phosphosulfate kinase (APS
kinase) {Human (Homo sapiens) [TaxId: 9606]}
Length = 195
Score = 25.4 bits (54), Expect = 5.9
Identities = 25/171 (14%), Positives = 54/171 (31%), Gaps = 14/171 (8%)
Query: 12 IIGAPGCGKGTISSRIIDHFNVKHIATGDILRSHIAQNTTLGLKAKEYMNKGLLVPDDLM 71
+ G G GK T+S + ++ I + +I Q L + + +
Sbjct: 24 LTGLSGAGKTTVSMALEEYLVCHGIPCYTLDGDNIRQGLNKNLGFSPEDREENV---RRI 80
Query: 72 IDLVKNEVKDLKCNYLLDGFPRTYDQAM--ALFKNHLSPNCVMHINVPKEVIIDRLSKRW 129
++ K P T D+ + + P + ++ P V R K
Sbjct: 81 AEVAKLFADAGLVCITSFISPYTQDRNNARQIHEGASLPFFEVFVDAPLHVCEQRDVKGL 140
Query: 130 IHPASGR------VYNLDFNAPKKPGIDDITGEKLIQRDDDKPEAIKKRLE 174
A + ++ P+ P + T + +D + + + L+
Sbjct: 141 YKKARAGEIKGFTGIDSEYEKPEAPELVLKTDSCDV---NDCVQQVVELLQ 188
>d1d2ea3 c.37.1.8 (A:55-250) Elongation factor Tu (EF-Tu),
N-terminal (G) domain {Cow (Bos taurus), mitochondrial
[TaxId: 9913]}
Length = 196
Score = 25.0 bits (54), Expect = 6.5
Identities = 10/31 (32%), Positives = 18/31 (58%)
Query: 60 MNKGLLVPDDLMIDLVKNEVKDLKCNYLLDG 90
+NK V D M++LV+ E+++L + G
Sbjct: 126 VNKADAVQDSEMVELVELEIRELLTEFGYKG 156
>d2gj8a1 c.37.1.8 (A:216-376) Probable tRNA modification GTPase
TrmE (MnmE), G domain {Escherichia coli [TaxId: 562]}
Length = 161
Score = 25.1 bits (53), Expect = 6.9
Identities = 7/21 (33%), Positives = 12/21 (57%)
Query: 8 LKAVIIGAPGCGKGTISSRII 28
+K VI G P GK ++ + +
Sbjct: 2 MKVVIAGRPNAGKSSLLNALA 22
>d1m7ga_ c.37.1.4 (A:) Adenosine-5'phosphosulfate kinase (APS
kinase) {Fungus (Penicillium chrysogenum) [TaxId: 5076]}
Length = 208
Score = 25.2 bits (54), Expect = 6.9
Identities = 23/163 (14%), Positives = 46/163 (28%), Gaps = 22/163 (13%)
Query: 12 IIGAPGCGKGTISSRIIDHFNVKHIAT-----GDILRSHIAQNTTLGLKAKEYMNKGLLV 66
+ G GK T++ + GD +R + ++ + + +
Sbjct: 29 LTGLSASGKSTLAVELEHQLVRDRRVHAYRLDGDNIRFGLNKDLGFSEADRNENIRRIAE 88
Query: 67 PDDLMIDLVKNEVKDLKCNYLLDGFPRTYDQAMALFKNHLSPNCVM------HINVPKEV 120
L + + + + + D A L + +++VP EV
Sbjct: 89 VAKLF-----ADSNSIAITSFISPYRKDRDTARQLHEVATPGEETGLPFVEVYVDVPVEV 143
Query: 121 IIDRLSKRWIHPASGRVY------NLDFNAPKKPGIDDITGEK 157
R K A V + + AP P + E
Sbjct: 144 AEQRDPKGLYKKAREGVIKEFTGISAPYEAPANPEVHVKNYEL 186
>d3b60a1 c.37.1.12 (A:329-581) Multidrug resistance ABC transporter
MsbA, C-terminal domain {Salmonella typhimurium [TaxId:
90371]}
Length = 253
Score = 25.2 bits (55), Expect = 7.1
Identities = 17/112 (15%), Positives = 35/112 (31%), Gaps = 17/112 (15%)
Query: 11 VIIGAPGCGKGTI------------SSRIIDHFNVKHIATGDILRSHIA---QNTTLGLK 55
++G G GK TI ++D +++ LR+ +A QN L
Sbjct: 45 ALVGRSGSGKSTIASLITRFYDIDEGHILMDGHDLREYTLAS-LRNQVALVSQNVHLF-N 102
Query: 56 AKEYMNKGLLVPDDLMIDLVKNEVKDLKCNYLLDGFPRTYDQAMALFKNHLS 107
N ++ + ++ + ++ D + LS
Sbjct: 103 DTVANNIAYARTEEYSREQIEEAARMAYAMDFINKMDNGLDTIIGENGVLLS 154
>d1nn5a_ c.37.1.1 (A:) Thymidylate kinase {Human (Homo sapiens)
[TaxId: 9606]}
Length = 209
Score = 24.9 bits (53), Expect = 7.8
Identities = 6/26 (23%), Positives = 11/26 (42%)
Query: 11 VIIGAPGCGKGTISSRIIDHFNVKHI 36
V+ G GK T S ++++
Sbjct: 7 VLEGVDRAGKSTQSRKLVEALCAAGH 32
>d1nw3a_ c.66.1.31 (A:) Catalytic, N-terminal domain of histone
methyltransferase Dot1l {Human (Homo sapiens) [TaxId:
9606]}
Length = 328
Score = 25.2 bits (54), Expect = 8.6
Identities = 11/84 (13%), Positives = 28/84 (33%), Gaps = 2/84 (2%)
Query: 1 MLNTLLMLKAVIIGAPGCGKGTISSRIIDHFNVKHIATGDILRSHIAQNTTLGLKAKEYM 60
M++ + M + G G G + ++ N KH + T+ + +++M
Sbjct: 143 MIDEIKMTDDDLFVDLGSGVGQVVLQVAAATNCKHHYGVEKADIPAKYAETMDREFRKWM 202
Query: 61 NKGLLVPDDLMIDLVKNEVKDLKC 84
+ L + + +
Sbjct: 203 KWYGKKHAE--YTLERGDFLSEEW 224
>d1e2ka_ c.37.1.1 (A:) Thymidine kinase {Herpes simplex virus type
1, different strains [TaxId: 10298]}
Length = 329
Score = 25.0 bits (54), Expect = 8.6
Identities = 8/30 (26%), Positives = 14/30 (46%)
Query: 7 MLKAVIIGAPGCGKGTISSRIIDHFNVKHI 36
+L+ I G G GK T + ++ + I
Sbjct: 4 LLRVYIDGPHGMGKTTTTQLLVALGSRDDI 33
>d1uaaa1 c.37.1.19 (A:2-307) DEXX box DNA helicase {Escherichia
coli, RepD [TaxId: 562]}
Length = 306
Score = 25.1 bits (53), Expect = 9.0
Identities = 6/34 (17%), Positives = 12/34 (35%), Gaps = 1/34 (2%)
Query: 10 AVIIGAPGCGK-GTISSRIIDHFNVKHIATGDIL 42
+++ G GK I+++I I
Sbjct: 17 CLVLAGAGSGKTRVITNKIAHLIRGCGYQARHIA 50
Database: scop70_1_75
Posted date: Mar 27, 2010 6:21 PM
Number of letters in database: 2,407,596
Number of sequences in database: 13,730
Lambda K H
0.320 0.140 0.422
Gapped
Lambda K H
0.267 0.0449 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 13730
Number of Hits to DB: 928,841
Number of extensions: 45603
Number of successful extensions: 358
Number of sequences better than 10.0: 1
Number of HSP's gapped: 350
Number of HSP's successfully gapped: 159
Length of query: 228
Length of database: 2,407,596
Length adjustment: 82
Effective length of query: 146
Effective length of database: 1,281,736
Effective search space: 187133456
Effective search space used: 187133456
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 51 (24.1 bits)