BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy6804
(207 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|328709609|ref|XP_001952788.2| PREDICTED: hypothetical protein LOC100161474 [Acyrthosiphon pisum]
Length = 373
Score = 204 bits (519), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 110/204 (53%), Positives = 135/204 (66%), Gaps = 8/204 (3%)
Query: 1 MNAILNKNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIYMCDKHKQKPATIASKRMFD 60
MNAILNKNS + C ++ SL+PC+E AK+IIQSGIKEV+YM D K A+K+MFD
Sbjct: 132 MNAILNKNSIHIQNCTIFVSLYPCSEAAKIIIQSGIKEVVYMPDLKSSKDQ--ATKKMFD 189
Query: 61 AAKVHYWSEMDKMNGVQNGSPHKRVDDVLEWHEYFMASAFLVAKRSKDPVTRVGAVIVNE 120
A+ V N + + P V FMA A+L A RSKDPV +VGA IVN
Sbjct: 190 ASGVEIREHTPNQNIIIS-FPKLDSPVVDLSRNLFMAIAYLTAMRSKDPVCQVGACIVNS 248
Query: 121 DNKIVGTGYNGMPIGCSDDEFPWDKNTHDELD----MCHAEMNAILNKNSA-DTKRCKLY 175
DN IVGTGYNGMP GC+DDEFPW N + L+ +CHAEMNA+ K+S + K C LY
Sbjct: 249 DNTIVGTGYNGMPTGCNDDEFPWGNNKNLTLNKFIYVCHAEMNAVFYKSSMINVKDCTLY 308
Query: 176 TSLFPCNECAKVIIQSGIKEVIYM 199
+ FPC ECAK+IIQSGIKEV+Y+
Sbjct: 309 VTRFPCIECAKIIIQSGIKEVVYL 332
Score = 132 bits (331), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 67/119 (56%), Positives = 81/119 (68%), Gaps = 5/119 (4%)
Query: 87 DVLEWHEYFMASAFLVAKRSKDPVTRVGAVIVNEDNKIVGTGYNGMPIGCSDDEFPWDKN 146
D L W + FMA AFL AK +KD +VGA IV+ D KIVG GYNGMP GC++ F K
Sbjct: 66 DYLSWDDLFMAIAFLTAKCNKDLKKKVGACIVDSDKKIVGIGYNGMPTGCNNGNFLDHK- 124
Query: 147 THDELDMCHAEMNAILNKNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIYMCDKQMS 205
CHAEMNAILNKNS + C ++ SL+PC+E AK+IIQSGIKEV+YM D + S
Sbjct: 125 ----FAQCHAEMNAILNKNSIHIQNCTIFVSLYPCSEAAKIIIQSGIKEVVYMPDLKSS 179
Score = 63.9 bits (154), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 32/69 (46%), Positives = 45/69 (65%), Gaps = 1/69 (1%)
Query: 1 MNAILNKNSA-DTKRCKLYTSLFPCNECAKVIIQSGIKEVIYMCDKHKQKPATIASKRMF 59
MNA+ K+S + K C LY + FPC ECAK+IIQSGIKEV+Y+ + K A+K +F
Sbjct: 290 MNAVFYKSSMINVKDCTLYVTRFPCIECAKIIIQSGIKEVVYLTNPKYGKGKDTATKDLF 349
Query: 60 DAAKVHYWS 68
A+ V ++
Sbjct: 350 KASGVKIYA 358
>gi|114052458|ref|NP_001040508.1| DCMP deaminase [Bombyx mori]
gi|95102556|gb|ABF51216.1| DCMP deaminase [Bombyx mori]
Length = 189
Score = 189 bits (480), Expect = 6e-46, Method: Compositional matrix adjust.
Identities = 93/143 (65%), Positives = 107/143 (74%), Gaps = 10/143 (6%)
Query: 70 MDKMNGVQNGSPH-----KRVDDVLEWHEYFMASAFLVAKRSKDPVTRVGAVIVNEDNKI 124
MD + N S H K+ +D ++W EYFMA AFL AKRSKDP T+VGA IVN DNKI
Sbjct: 1 MDLTENIANISLHEEQTAKKRNDYIDWQEYFMAVAFLAAKRSKDPKTQVGACIVNNDNKI 60
Query: 125 VGTGYNGMPIGCSDDEFPWDKNTHDELD-----MCHAEMNAILNKNSADTKRCKLYTSLF 179
VG GYNGMPIGC+DD+FPW KNT LD +CHAEMNAILNKNSAD K C +Y LF
Sbjct: 61 VGIGYNGMPIGCNDDDFPWGKNTPSPLDSKYLYVCHAEMNAILNKNSADVKDCTIYVGLF 120
Query: 180 PCNECAKVIIQSGIKEVIYMCDK 202
PCNECAK+IIQSGIK+V+Y+ DK
Sbjct: 121 PCNECAKMIIQSGIKKVVYLSDK 143
Score = 95.9 bits (237), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 43/66 (65%), Positives = 54/66 (81%)
Query: 1 MNAILNKNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIYMCDKHKQKPATIASKRMFD 60
MNAILNKNSAD K C +Y LFPCNECAK+IIQSGIK+V+Y+ DK+ +P IASK+MF+
Sbjct: 99 MNAILNKNSADVKDCTIYVGLFPCNECAKMIIQSGIKKVVYLSDKNAHRPEYIASKKMFN 158
Query: 61 AAKVHY 66
A+ + Y
Sbjct: 159 ASNIIY 164
>gi|170037331|ref|XP_001846512.1| deoxycytidylate deaminase [Culex quinquefasciatus]
gi|167880421|gb|EDS43804.1| deoxycytidylate deaminase [Culex quinquefasciatus]
Length = 193
Score = 186 bits (471), Expect = 7e-45, Method: Compositional matrix adjust.
Identities = 86/129 (66%), Positives = 103/129 (79%), Gaps = 5/129 (3%)
Query: 80 SPHKRVDDVLEWHEYFMASAFLVAKRSKDPVTRVGAVIVNEDNKIVGTGYNGMPIGCSDD 139
S ++ D L+W+EYFMA+AFL AKRSKDP T+VGA IVN++ KIVG GYNG PIGC DD
Sbjct: 14 SLEQKRADYLDWNEYFMATAFLAAKRSKDPNTQVGACIVNDERKIVGVGYNGFPIGCGDD 73
Query: 140 EFPWDKNTHDELD-----MCHAEMNAILNKNSADTKRCKLYTSLFPCNECAKVIIQSGIK 194
+FPW KN++D LD +CHAEMNAILNKNS+D K C +Y +LFPCNECAK+IIQS I+
Sbjct: 74 DFPWGKNSNDPLDTKYLYVCHAEMNAILNKNSSDVKNCTMYVALFPCNECAKIIIQSRIR 133
Query: 195 EVIYMCDKQ 203
EVIYM DK
Sbjct: 134 EVIYMSDKH 142
Score = 107 bits (266), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 50/72 (69%), Positives = 58/72 (80%)
Query: 1 MNAILNKNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIYMCDKHKQKPATIASKRMFD 60
MNAILNKNS+D K C +Y +LFPCNECAK+IIQS I+EVIYM DKH K +TIASK+MFD
Sbjct: 97 MNAILNKNSSDVKNCTMYVALFPCNECAKIIIQSRIREVIYMSDKHALKKSTIASKKMFD 156
Query: 61 AAKVHYWSEMDK 72
AA V YW + K
Sbjct: 157 AAGVKYWQFVPK 168
>gi|443729740|gb|ELU15543.1| hypothetical protein CAPTEDRAFT_150280 [Capitella teleta]
Length = 238
Score = 185 bits (469), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 85/125 (68%), Positives = 100/125 (80%), Gaps = 5/125 (4%)
Query: 83 KRVDDVLEWHEYFMASAFLVAKRSKDPVTRVGAVIVNEDNKIVGTGYNGMPIGCSDDEFP 142
K+ +D L W +YFMA AFL A+RSKDP T+VGA +VN +NKIVGTGYNGMPIGCSDD P
Sbjct: 49 KKREDYLSWPDYFMAIAFLSAQRSKDPRTQVGACVVNSENKIVGTGYNGMPIGCSDDNLP 108
Query: 143 WDKNTHDELD-----MCHAEMNAILNKNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVI 197
WD+ +ELD +CHAE+NAILNKNS+D K C +Y +LFPCNECAKVIIQSGI+ VI
Sbjct: 109 WDRKAENELDTKYLYVCHAELNAILNKNSSDVKNCTIYVALFPCNECAKVIIQSGIRCVI 168
Query: 198 YMCDK 202
YM DK
Sbjct: 169 YMSDK 173
Score = 92.8 bits (229), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 42/66 (63%), Positives = 52/66 (78%)
Query: 1 MNAILNKNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIYMCDKHKQKPATIASKRMFD 60
+NAILNKNS+D K C +Y +LFPCNECAKVIIQSGI+ VIYM DK+ P +IAS+R+ D
Sbjct: 129 LNAILNKNSSDVKNCTIYVALFPCNECAKVIIQSGIRCVIYMSDKNHDSPESIASRRLLD 188
Query: 61 AAKVHY 66
A V +
Sbjct: 189 MAGVIF 194
>gi|157104304|ref|XP_001648345.1| deoxycytidylate deaminase [Aedes aegypti]
gi|108869217|gb|EAT33442.1| AAEL014287-PA [Aedes aegypti]
Length = 197
Score = 184 bits (467), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 89/131 (67%), Positives = 102/131 (77%), Gaps = 6/131 (4%)
Query: 78 NGSPHKRVDDVLEWHEYFMASAFLVAKRSKDPVTRVGAVIVNEDNKIVGTGYNGMPIGCS 137
N S KR D L+W+EYFMA+AFL A+RSKDP T+VGA IVNE+ KIVG GYNG P+GCS
Sbjct: 12 NLSEQKRAD-YLDWNEYFMATAFLAARRSKDPNTQVGACIVNEERKIVGVGYNGFPLGCS 70
Query: 138 DDEFPWDKNTHDELD-----MCHAEMNAILNKNSADTKRCKLYTSLFPCNECAKVIIQSG 192
DDEFPW K + D L +CHAEMNAILNKNS+D K C +Y +LFPCNECAK+IIQS
Sbjct: 71 DDEFPWGKASLDPLGTKYLYVCHAEMNAILNKNSSDVKNCTMYVALFPCNECAKIIIQSK 130
Query: 193 IKEVIYMCDKQ 203
IKEVIYM DK
Sbjct: 131 IKEVIYMSDKH 141
Score = 106 bits (264), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 48/67 (71%), Positives = 55/67 (82%)
Query: 1 MNAILNKNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIYMCDKHKQKPATIASKRMFD 60
MNAILNKNS+D K C +Y +LFPCNECAK+IIQS IKEVIYM DKH K TIA+K+MFD
Sbjct: 96 MNAILNKNSSDVKNCTMYVALFPCNECAKIIIQSKIKEVIYMSDKHAHKNTTIAAKKMFD 155
Query: 61 AAKVHYW 67
AA + YW
Sbjct: 156 AAGIKYW 162
>gi|397637031|gb|EJK72503.1| hypothetical protein THAOC_05955 [Thalassiosira oceanica]
Length = 1155
Score = 184 bits (466), Expect = 3e-44, Method: Composition-based stats.
Identities = 105/247 (42%), Positives = 136/247 (55%), Gaps = 45/247 (18%)
Query: 1 MNAILNKNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIYMCDKHKQKPATIASKRMFD 60
+NAILNK S+D +++T FP NECAK IIQSGI EV+Y+ D ++ AS+ +F+
Sbjct: 443 INAILNKCSSDVVGARIFTPNFPSNECAKFIIQSGITEVVYVNDDEHDSDSSRASRILFE 502
Query: 61 AAKVHYWS--------------------------------EMDKMNGVQ----NGSPHK- 83
+ V EM++ G+ N P K
Sbjct: 503 VSGVKTTKMRPTNPRVEIDFGTGSSVTAADETDRSNLDEDEMERHLGLMQREANIDPFKF 562
Query: 84 ---RVDDVLEWHEYFMASAFLVAKRSKDPVTRVGAVIVNEDNKIVGTGYNGMPIGCSDDE 140
+ D L W YFM AFL A+RSKDP T+VGA IV+E+ IVG GYNG+P C D+
Sbjct: 563 KVRKRSDYLSWDSYFMGVAFLSAQRSKDPSTQVGACIVDENKCIVGIGYNGLPRNCDDET 622
Query: 141 FPWDKNTHDELD-----MCHAEMNAILNKNSADTKRCKLYTSLFPCNECAKVIIQSGIKE 195
PW + EL + HAE+NAILNK SA + LY +LFPCNEC KVIIQSGIKE
Sbjct: 623 LPWARTGDCELHKKYLYVVHAEVNAILNKCSASVRGATLYVALFPCNECTKVIIQSGIKE 682
Query: 196 VIYMCDK 202
V+++ DK
Sbjct: 683 VVFIDDK 689
Score = 121 bits (304), Expect = 1e-25, Method: Composition-based stats.
Identities = 64/136 (47%), Positives = 82/136 (60%), Gaps = 14/136 (10%)
Query: 80 SPHKRVDDVLEWHEYFMASAFLVAKRSKDPVT----RVGAVIVNEDNKIVGTGYNGMPIG 135
+P +R L W +YFMA A L A RSKDP R GA IV+ N++VG GY+G P G
Sbjct: 355 TPKRR--GYLSWDDYFMAVAHLSALRSKDPRPSERGRSGACIVDGSNRVVGIGYDGFPRG 412
Query: 136 CSDDEFPWDKNTHDELD--------MCHAEMNAILNKNSADTKRCKLYTSLFPCNECAKV 187
C DD PW D ++ +C AE+NAILNK S+D +++T FP NECAK
Sbjct: 413 CPDDCLPWASADGDGVEWLHGRDAYLCRAEINAILNKCSSDVVGARIFTPNFPSNECAKF 472
Query: 188 IIQSGIKEVIYMCDKQ 203
IIQSGI EV+Y+ D +
Sbjct: 473 IIQSGITEVVYVNDDE 488
Score = 75.1 bits (183), Expect = 2e-11, Method: Composition-based stats.
Identities = 45/97 (46%), Positives = 58/97 (59%), Gaps = 6/97 (6%)
Query: 1 MNAILNKNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIYMCDKHKQKPATIASKRMFD 60
+NAILNK SA + LY +LFPCNEC KVIIQSGIKEV+++ DK+ + AS+ MF
Sbjct: 645 VNAILNKCSASVRGATLYVALFPCNECTKVIIQSGIKEVVFIDDKYHDTDSCRASRIMFK 704
Query: 61 AAKV---HYWSEMDKMNGVQNGSPHKRVD-DVLEWHE 93
A V Y E K+ + + +D DV E HE
Sbjct: 705 MAGVKLRQYRPEYSKITTLI--ADQDVIDRDVNELHE 739
>gi|193636783|ref|XP_001945167.1| PREDICTED: deoxycytidylate deaminase-like [Acyrthosiphon pisum]
Length = 220
Score = 182 bits (463), Expect = 6e-44, Method: Compositional matrix adjust.
Identities = 82/133 (61%), Positives = 104/133 (78%), Gaps = 5/133 (3%)
Query: 75 GVQNGSPHKRVDDVLEWHEYFMASAFLVAKRSKDPVTRVGAVIVNEDNKIVGTGYNGMPI 134
++ + +++ + L W ++FMA+AFLVAKRSKDPVT+VGA IV D KIVGTGYNGMPI
Sbjct: 33 SIETETLNEKRKNYLSWDDFFMATAFLVAKRSKDPVTQVGACIVTPDKKIVGTGYNGMPI 92
Query: 135 GCSDDEFPWDKNTHDELD-----MCHAEMNAILNKNSADTKRCKLYTSLFPCNECAKVII 189
GC+DD FPW KN +L+ +CHAEMNA+LNKNS D + C +Y +LFPCNECAK+II
Sbjct: 93 GCNDDNFPWGKNNPSKLENKYFYVCHAEMNAVLNKNSMDVRNCTIYVALFPCNECAKIII 152
Query: 190 QSGIKEVIYMCDK 202
QSGIKEV+Y+ DK
Sbjct: 153 QSGIKEVVYLSDK 165
Score = 97.1 bits (240), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 43/64 (67%), Positives = 52/64 (81%)
Query: 1 MNAILNKNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIYMCDKHKQKPATIASKRMFD 60
MNA+LNKNS D + C +Y +LFPCNECAK+IIQSGIKEV+Y+ DK+ KP IASKRMF
Sbjct: 121 MNAVLNKNSMDVRNCTIYVALFPCNECAKIIIQSGIKEVVYLSDKYSFKPEMIASKRMFK 180
Query: 61 AAKV 64
A+ V
Sbjct: 181 ASGV 184
>gi|332376376|gb|AEE63328.1| unknown [Dendroctonus ponderosae]
Length = 222
Score = 182 bits (463), Expect = 6e-44, Method: Compositional matrix adjust.
Identities = 83/127 (65%), Positives = 100/127 (78%), Gaps = 5/127 (3%)
Query: 82 HKRVDDVLEWHEYFMASAFLVAKRSKDPVTRVGAVIVNEDNKIVGTGYNGMPIGCSDDEF 141
+++ +D LEW +YFMA+AFL AKRSKDP ++VGA IVNEDN IVG GYNGMP CSDDEF
Sbjct: 11 NRKREDYLEWPDYFMATAFLAAKRSKDPCSQVGACIVNEDNVIVGIGYNGMPKNCSDDEF 70
Query: 142 PWDKNTHDELD-----MCHAEMNAILNKNSADTKRCKLYTSLFPCNECAKVIIQSGIKEV 196
PW K + +LD +CHAE+NAILNKNS D + C +Y LFPCNECAKVIIQSG+K++
Sbjct: 71 PWSKGSKSDLDNKYLYVCHAELNAILNKNSVDVRNCTMYVGLFPCNECAKVIIQSGVKQI 130
Query: 197 IYMCDKQ 203
IYM DK
Sbjct: 131 IYMSDKH 137
Score = 101 bits (251), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 45/66 (68%), Positives = 53/66 (80%)
Query: 1 MNAILNKNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIYMCDKHKQKPATIASKRMFD 60
+NAILNKNS D + C +Y LFPCNECAKVIIQSG+K++IYM DKH K +TIASKRM D
Sbjct: 92 LNAILNKNSVDVRNCTMYVGLFPCNECAKVIIQSGVKQIIYMSDKHGMKQSTIASKRMLD 151
Query: 61 AAKVHY 66
AA + Y
Sbjct: 152 AAGIKY 157
>gi|312374791|gb|EFR22274.1| hypothetical protein AND_15517 [Anopheles darlingi]
Length = 193
Score = 182 bits (462), Expect = 7e-44, Method: Compositional matrix adjust.
Identities = 84/127 (66%), Positives = 99/127 (77%), Gaps = 6/127 (4%)
Query: 82 HKRVDDVLEWHEYFMASAFLVAKRSKDPVTRVGAVIVNEDNKIVGTGYNGMPIGCSDDEF 141
HKR D ++W EYFMA AFL AKRSKDP T+VGA IVNED ++VG GYNG P GC+DDEF
Sbjct: 16 HKR-KDTIDWTEYFMAMAFLAAKRSKDPSTQVGACIVNEDKRVVGLGYNGFPTGCNDDEF 74
Query: 142 PWDKNTHDELD-----MCHAEMNAILNKNSADTKRCKLYTSLFPCNECAKVIIQSGIKEV 196
PW K + D L+ +CHAE+NAILNKNSAD K C +Y +LFPCNECAK+IIQS I+EV
Sbjct: 75 PWSKTSSDPLETKYLYVCHAEVNAILNKNSADVKNCTMYVALFPCNECAKIIIQSAIREV 134
Query: 197 IYMCDKQ 203
+YM DK
Sbjct: 135 VYMSDKH 141
Score = 102 bits (254), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 47/66 (71%), Positives = 54/66 (81%)
Query: 1 MNAILNKNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIYMCDKHKQKPATIASKRMFD 60
+NAILNKNSAD K C +Y +LFPCNECAK+IIQS I+EV+YM DKH K TIA+KRMFD
Sbjct: 96 VNAILNKNSADVKNCTMYVALFPCNECAKIIIQSAIREVVYMSDKHAHKEHTIAAKRMFD 155
Query: 61 AAKVHY 66
AA V Y
Sbjct: 156 AAGVKY 161
>gi|348530634|ref|XP_003452815.1| PREDICTED: hypothetical protein LOC100699771 [Oreochromis
niloticus]
Length = 415
Score = 182 bits (462), Expect = 8e-44, Method: Compositional matrix adjust.
Identities = 83/137 (60%), Positives = 105/137 (76%), Gaps = 5/137 (3%)
Query: 71 DKMNGVQNGSPHKRVDDVLEWHEYFMASAFLVAKRSKDPVTRVGAVIVNEDNKIVGTGYN 130
D + V N K+ +D LEW EYFMA AFL A+RSKDP ++VGA IVN++NKIVG GYN
Sbjct: 230 DGIQSVANFGKTKKREDYLEWPEYFMAVAFLSAQRSKDPNSQVGACIVNQENKIVGIGYN 289
Query: 131 GMPIGCSDDEFPWDKNTHDELD-----MCHAEMNAILNKNSADTKRCKLYTSLFPCNECA 185
GMP GC+DD PW ++ D+LD +CHAE+NAI+NKNSAD K C +Y +LFPCNECA
Sbjct: 290 GMPNGCNDDLLPWSRSADDQLDTKYPYVCHAELNAIMNKNSADVKDCTMYVALFPCNECA 349
Query: 186 KVIIQSGIKEVIYMCDK 202
K+IIQ+G+KEV+Y+ DK
Sbjct: 350 KLIIQAGLKEVVYLSDK 366
Score = 91.7 bits (226), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 38/66 (57%), Positives = 51/66 (77%)
Query: 1 MNAILNKNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIYMCDKHKQKPATIASKRMFD 60
+NAI+NKNSAD K C +Y +LFPCNECAK+IIQ+G+KEV+Y+ DK+ P AS+R+
Sbjct: 322 LNAIMNKNSADVKDCTMYVALFPCNECAKLIIQAGLKEVVYLSDKYHDTPEMTASRRLLS 381
Query: 61 AAKVHY 66
AK+ Y
Sbjct: 382 MAKIKY 387
>gi|225714908|gb|ACO13300.1| Deoxycytidylate deaminase [Esox lucius]
Length = 201
Score = 182 bits (461), Expect = 9e-44, Method: Compositional matrix adjust.
Identities = 87/142 (61%), Positives = 105/142 (73%), Gaps = 7/142 (4%)
Query: 68 SEMDKMNGVQNGS--PHKRVDDVLEWHEYFMASAFLVAKRSKDPVTRVGAVIVNEDNKIV 125
+E ++NG S P K+ +D LEW EYFMA AFL A+RSKDP ++VGA IVN +NKIV
Sbjct: 7 TETSQVNGTSASSSAPTKKREDYLEWPEYFMAVAFLPAQRSKDPSSQVGACIVNPENKIV 66
Query: 126 GTGYNGMPIGCSDDEFPWDKNTHDELD-----MCHAEMNAILNKNSADTKRCKLYTSLFP 180
G GYNGMP GC DD PW + D LD +CHAE+NAI+NKNSAD K C +Y +LFP
Sbjct: 67 GIGYNGMPNGCDDDLLPWSRYADDRLDTKYPYVCHAELNAIMNKNSADVKGCSMYVALFP 126
Query: 181 CNECAKVIIQSGIKEVIYMCDK 202
CNECAK+IIQ+GIKEVIY+ DK
Sbjct: 127 CNECAKLIIQAGIKEVIYLSDK 148
Score = 87.8 bits (216), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 38/66 (57%), Positives = 50/66 (75%)
Query: 1 MNAILNKNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIYMCDKHKQKPATIASKRMFD 60
+NAI+NKNSAD K C +Y +LFPCNECAK+IIQ+GIKEVIY+ DK+ AS+R+ +
Sbjct: 104 LNAIMNKNSADVKGCSMYVALFPCNECAKLIIQAGIKEVIYLSDKYHDTTEMTASRRLLN 163
Query: 61 AAKVHY 66
A + Y
Sbjct: 164 LAGIEY 169
>gi|307202968|gb|EFN82184.1| Deoxycytidylate deaminase [Harpegnathos saltator]
Length = 181
Score = 180 bits (457), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 86/131 (65%), Positives = 101/131 (77%), Gaps = 6/131 (4%)
Query: 77 QNGSPHKRVDDVLEWHEYFMASAFLVAKRSKDPVTRVGAVIVNEDNKIVGTGYNGMPIGC 136
++ S KR L W EYFMA AFL A+RSKDP T+VGA IVN DNKI+G GYNGMPIGC
Sbjct: 2 EDNSTTKRTS-YLAWDEYFMAVAFLSAQRSKDPYTQVGACIVNNDNKIIGIGYNGMPIGC 60
Query: 137 SDDEFPWDKNTHDELD-----MCHAEMNAILNKNSADTKRCKLYTSLFPCNECAKVIIQS 191
SDD FPW+K ++ LD +CHAE+NA+LNKNS+D K C +Y +LFPCNECAKVIIQS
Sbjct: 61 SDDVFPWNKGSYSSLDSKYLYVCHAEVNAVLNKNSSDCKDCTIYVALFPCNECAKVIIQS 120
Query: 192 GIKEVIYMCDK 202
GI+ VIYM DK
Sbjct: 121 GIRTVIYMSDK 131
Score = 96.3 bits (238), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 44/66 (66%), Positives = 53/66 (80%)
Query: 1 MNAILNKNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIYMCDKHKQKPATIASKRMFD 60
+NA+LNKNS+D K C +Y +LFPCNECAKVIIQSGI+ VIYM DK K T+A+KRMFD
Sbjct: 87 VNAVLNKNSSDCKDCTIYVALFPCNECAKVIIQSGIRTVIYMSDKSSDKVQTVAAKRMFD 146
Query: 61 AAKVHY 66
AA + Y
Sbjct: 147 AAGIKY 152
>gi|209731626|gb|ACI66682.1| Deoxycytidylate deaminase [Salmo salar]
gi|209735240|gb|ACI68489.1| Deoxycytidylate deaminase [Salmo salar]
gi|303666664|gb|ADM16237.1| Deoxycytidylate deaminase [Salmo salar]
Length = 195
Score = 180 bits (457), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 85/142 (59%), Positives = 106/142 (74%), Gaps = 7/142 (4%)
Query: 68 SEMDKMNGVQNGSPH--KRVDDVLEWHEYFMASAFLVAKRSKDPVTRVGAVIVNEDNKIV 125
+E ++NG P K+ +D LEW EYFMA AFL A+RSKDP ++VGA IVN++NKIV
Sbjct: 7 NETSQLNGTPASDPAQTKKREDYLEWPEYFMAVAFLSAQRSKDPSSQVGACIVNQENKIV 66
Query: 126 GTGYNGMPIGCSDDEFPWDKNTHDELD-----MCHAEMNAILNKNSADTKRCKLYTSLFP 180
G GYNGMP GC DD PW ++ D LD +CHAE+NAI+NKNSAD K C +Y +LFP
Sbjct: 67 GIGYNGMPNGCDDDLLPWARSADDRLDTKYPYVCHAELNAIMNKNSADVKGCSMYVALFP 126
Query: 181 CNECAKVIIQSGIKEVIYMCDK 202
CNECAK+IIQ+GIK+VIY+ DK
Sbjct: 127 CNECAKLIIQAGIKDVIYLSDK 148
Score = 89.4 bits (220), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 38/66 (57%), Positives = 51/66 (77%)
Query: 1 MNAILNKNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIYMCDKHKQKPATIASKRMFD 60
+NAI+NKNSAD K C +Y +LFPCNECAK+IIQ+GIK+VIY+ DK+ P AS+R+ +
Sbjct: 104 LNAIMNKNSADVKGCSMYVALFPCNECAKLIIQAGIKDVIYLSDKYHDIPEMTASRRLLN 163
Query: 61 AAKVHY 66
A + Y
Sbjct: 164 LAGIQY 169
>gi|209732624|gb|ACI67181.1| Deoxycytidylate deaminase [Salmo salar]
Length = 195
Score = 180 bits (456), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 84/142 (59%), Positives = 106/142 (74%), Gaps = 7/142 (4%)
Query: 68 SEMDKMNGVQNGSPH--KRVDDVLEWHEYFMASAFLVAKRSKDPVTRVGAVIVNEDNKIV 125
+E ++NG P K+ +D LEW EYFMA AFL A+RSKDP ++VGA IVN++NKIV
Sbjct: 7 NETSQLNGTPASDPAQTKKREDYLEWPEYFMAVAFLSAQRSKDPSSQVGACIVNQENKIV 66
Query: 126 GTGYNGMPIGCSDDEFPWDKNTHDELD-----MCHAEMNAILNKNSADTKRCKLYTSLFP 180
G GYNGMP GC DD PW ++ D LD +CHAE+NAI+NKNSAD K C +Y +LFP
Sbjct: 67 GIGYNGMPNGCDDDLLPWARSADDRLDTKYPYVCHAELNAIMNKNSADVKGCSMYVALFP 126
Query: 181 CNECAKVIIQSGIKEVIYMCDK 202
CNECAK+IIQ+GIK+V+Y+ DK
Sbjct: 127 CNECAKLIIQAGIKDVVYLSDK 148
Score = 89.0 bits (219), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 37/66 (56%), Positives = 51/66 (77%)
Query: 1 MNAILNKNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIYMCDKHKQKPATIASKRMFD 60
+NAI+NKNSAD K C +Y +LFPCNECAK+IIQ+GIK+V+Y+ DK+ P AS+R+ +
Sbjct: 104 LNAIMNKNSADVKGCSMYVALFPCNECAKLIIQAGIKDVVYLSDKYHDIPEMTASRRLLN 163
Query: 61 AAKVHY 66
A + Y
Sbjct: 164 LAGIQY 169
>gi|348566869|ref|XP_003469224.1| PREDICTED: deoxycytidylate deaminase-like [Cavia porcellus]
Length = 267
Score = 179 bits (455), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 82/125 (65%), Positives = 99/125 (79%), Gaps = 5/125 (4%)
Query: 83 KRVDDVLEWHEYFMASAFLVAKRSKDPVTRVGAVIVNEDNKIVGTGYNGMPIGCSDDEFP 142
++ DD LEW EYFMA AFL A+RSKDP ++VGA IVN +NKIVG GYNGMP GCSDD P
Sbjct: 96 RKRDDYLEWPEYFMAVAFLSAQRSKDPNSQVGACIVNAENKIVGIGYNGMPNGCSDDLLP 155
Query: 143 WDKNTHDELD-----MCHAEMNAILNKNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVI 197
W + ++LD +CHAE+NAI+NKNSAD K C +Y +LFPCNECAK+IIQ+GIKEVI
Sbjct: 156 WRRTAENKLDTKYPYVCHAELNAIMNKNSADVKGCSMYVALFPCNECAKLIIQAGIKEVI 215
Query: 198 YMCDK 202
+M DK
Sbjct: 216 FMSDK 220
Score = 87.8 bits (216), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 39/66 (59%), Positives = 51/66 (77%)
Query: 1 MNAILNKNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIYMCDKHKQKPATIASKRMFD 60
+NAI+NKNSAD K C +Y +LFPCNECAK+IIQ+GIKEVI+M DK+ T A++ MF+
Sbjct: 176 LNAIMNKNSADVKGCSMYVALFPCNECAKLIIQAGIKEVIFMSDKYHDSDETTAARLMFE 235
Query: 61 AAKVHY 66
A V +
Sbjct: 236 MAGVTF 241
>gi|327285966|ref|XP_003227702.1| PREDICTED: deoxycytidylate deaminase-like [Anolis carolinensis]
Length = 235
Score = 179 bits (455), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 87/140 (62%), Positives = 102/140 (72%), Gaps = 5/140 (3%)
Query: 68 SEMDKMNGVQNGSPHKRVDDVLEWHEYFMASAFLVAKRSKDPVTRVGAVIVNEDNKIVGT 127
SE NG K+ DD LEW EYFMA AFL A+RSKDP ++VGA IVN +NKIVG
Sbjct: 8 SEASNPNGYSCEMTCKKRDDYLEWPEYFMAVAFLSAQRSKDPHSQVGACIVNSENKIVGI 67
Query: 128 GYNGMPIGCSDDEFPWDKNTHDELD-----MCHAEMNAILNKNSADTKRCKLYTSLFPCN 182
GYNGMP GCSDD PW + +LD +CHAE+NAI+NKNSAD K C +Y +LFPCN
Sbjct: 68 GYNGMPNGCSDDSLPWTRTAESKLDTKYPYVCHAELNAIMNKNSADVKGCSMYVALFPCN 127
Query: 183 ECAKVIIQSGIKEVIYMCDK 202
ECAK+IIQ+GIKEVI+M DK
Sbjct: 128 ECAKLIIQAGIKEVIFMSDK 147
Score = 93.2 bits (230), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 41/66 (62%), Positives = 52/66 (78%)
Query: 1 MNAILNKNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIYMCDKHKQKPATIASKRMFD 60
+NAI+NKNSAD K C +Y +LFPCNECAK+IIQ+GIKEVI+M DK+ P AS+R+FD
Sbjct: 103 LNAIMNKNSADVKGCSMYVALFPCNECAKLIIQAGIKEVIFMSDKYHDTPEMTASRRLFD 162
Query: 61 AAKVHY 66
A + Y
Sbjct: 163 LAGIIY 168
>gi|432844072|ref|XP_004065699.1| PREDICTED: deoxycytidylate deaminase-like [Oryzias latipes]
Length = 179
Score = 179 bits (455), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 83/130 (63%), Positives = 101/130 (77%), Gaps = 5/130 (3%)
Query: 78 NGSPHKRVDDVLEWHEYFMASAFLVAKRSKDPVTRVGAVIVNEDNKIVGTGYNGMPIGCS 137
NG K+ +D LEW EYFMA AFL A+RSKDP ++VGA IVN++NKIVG GYNGMP GC
Sbjct: 11 NGCSAKKREDYLEWPEYFMAVAFLSAQRSKDPNSQVGACIVNQENKIVGIGYNGMPNGCD 70
Query: 138 DDEFPWDKNTHDELD-----MCHAEMNAILNKNSADTKRCKLYTSLFPCNECAKVIIQSG 192
DD PW ++ D LD +CHAE+NAI+NKNSAD K C +Y +LFPCNECAK+IIQ+G
Sbjct: 71 DDLLPWSRSADDRLDTKYPYVCHAELNAIMNKNSADVKGCTMYVALFPCNECAKLIIQAG 130
Query: 193 IKEVIYMCDK 202
+KEVIY+ DK
Sbjct: 131 LKEVIYLSDK 140
Score = 90.9 bits (224), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 38/66 (57%), Positives = 52/66 (78%)
Query: 1 MNAILNKNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIYMCDKHKQKPATIASKRMFD 60
+NAI+NKNSAD K C +Y +LFPCNECAK+IIQ+G+KEVIY+ DK+ P +AS+R+ +
Sbjct: 96 LNAIMNKNSADVKGCTMYVALFPCNECAKLIIQAGLKEVIYLSDKYHDTPEMMASRRLLN 155
Query: 61 AAKVHY 66
A + Y
Sbjct: 156 MAGIQY 161
>gi|58389825|ref|XP_317305.2| AGAP008158-PA [Anopheles gambiae str. PEST]
gi|55237525|gb|EAA12688.2| AGAP008158-PA [Anopheles gambiae str. PEST]
Length = 180
Score = 179 bits (454), Expect = 6e-43, Method: Compositional matrix adjust.
Identities = 84/137 (61%), Positives = 99/137 (72%), Gaps = 5/137 (3%)
Query: 72 KMNGVQNGSPHKRVDDVLEWHEYFMASAFLVAKRSKDPVTRVGAVIVNEDNKIVGTGYNG 131
KM P + D L+W E FMA AFL AKRSKDP T+VGA IVNEDN+IVG GYNG
Sbjct: 10 KMASDSPARPSGKRQDTLDWAECFMAMAFLAAKRSKDPSTQVGACIVNEDNRIVGIGYNG 69
Query: 132 MPIGCSDDEFPWDKNTHDELD-----MCHAEMNAILNKNSADTKRCKLYTSLFPCNECAK 186
P GCSDDEFPW K + + L+ +CHAE+NAILNKNS D + C +Y +LFPCNECAK
Sbjct: 70 FPKGCSDDEFPWSKTSDNPLETKYLYVCHAEVNAILNKNSTDVRNCTMYVALFPCNECAK 129
Query: 187 VIIQSGIKEVIYMCDKQ 203
+IIQS I+EV+YM DK
Sbjct: 130 IIIQSAIREVVYMSDKH 146
Score = 102 bits (253), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 49/85 (57%), Positives = 59/85 (69%), Gaps = 9/85 (10%)
Query: 1 MNAILNKNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIYMCDKHKQKPATIASKRMFD 60
+NAILNKNS D + C +Y +LFPCNECAK+IIQS I+EV+YM DKH K TIA+KRMFD
Sbjct: 101 VNAILNKNSTDVRNCTMYVALFPCNECAKIIIQSAIREVVYMSDKHAHKEHTIAAKRMFD 160
Query: 61 AAKVHYWSEMDKMNGVQNGSPHKRV 85
AA V Y Q PHK++
Sbjct: 161 AAGVRY---------TQYKPPHKQI 176
>gi|126331283|ref|XP_001370213.1| PREDICTED: deoxycytidylate deaminase-like [Monodelphis domestica]
Length = 345
Score = 179 bits (454), Expect = 7e-43, Method: Compositional matrix adjust.
Identities = 85/130 (65%), Positives = 100/130 (76%), Gaps = 5/130 (3%)
Query: 78 NGSPHKRVDDVLEWHEYFMASAFLVAKRSKDPVTRVGAVIVNEDNKIVGTGYNGMPIGCS 137
N P K+ DD LEW EYFMA AFL A+RSKDP ++VGA IVN +NKIVG GYNGMP GCS
Sbjct: 170 NDLPCKKRDDYLEWPEYFMAVAFLSAQRSKDPNSQVGACIVNAENKIVGIGYNGMPNGCS 229
Query: 138 DDEFPWDKNTHDELD-----MCHAEMNAILNKNSADTKRCKLYTSLFPCNECAKVIIQSG 192
DD PW + +LD +CHAE+NAI+NKNSAD K C +Y +LFPCNECAK+IIQ+G
Sbjct: 230 DDLLPWSRTAEKKLDTKYPYVCHAELNAIMNKNSADVKGCTMYVALFPCNECAKLIIQAG 289
Query: 193 IKEVIYMCDK 202
IKEVI+M DK
Sbjct: 290 IKEVIFMSDK 299
Score = 88.2 bits (217), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 39/66 (59%), Positives = 51/66 (77%)
Query: 1 MNAILNKNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIYMCDKHKQKPATIASKRMFD 60
+NAI+NKNSAD K C +Y +LFPCNECAK+IIQ+GIKEVI+M DK+ T A++ MFD
Sbjct: 255 LNAIMNKNSADVKGCTMYVALFPCNECAKLIIQAGIKEVIFMSDKYHDNDETTAARLMFD 314
Query: 61 AAKVHY 66
A + +
Sbjct: 315 LAGIKF 320
>gi|354466102|ref|XP_003495514.1| PREDICTED: deoxycytidylate deaminase-like [Cricetulus griseus]
Length = 184
Score = 179 bits (453), Expect = 7e-43, Method: Compositional matrix adjust.
Identities = 83/125 (66%), Positives = 99/125 (79%), Gaps = 5/125 (4%)
Query: 83 KRVDDVLEWHEYFMASAFLVAKRSKDPVTRVGAVIVNEDNKIVGTGYNGMPIGCSDDEFP 142
K+ DD LEW EYFMA AFL A+RSKDP ++VGA IVN +NKIVG GYNGMP GCSDD P
Sbjct: 13 KKRDDYLEWPEYFMAVAFLSAQRSKDPSSQVGACIVNTENKIVGIGYNGMPNGCSDDLLP 72
Query: 143 WDKNTHDELD-----MCHAEMNAILNKNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVI 197
W + ++LD +CHAE+NAI+NKNSAD K C +Y +LFPCNECAK+IIQ+GIKEVI
Sbjct: 73 WRRTAENKLDTKYPYVCHAELNAIMNKNSADVKGCSMYVALFPCNECAKLIIQAGIKEVI 132
Query: 198 YMCDK 202
+M DK
Sbjct: 133 FMSDK 137
Score = 86.7 bits (213), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 39/66 (59%), Positives = 50/66 (75%)
Query: 1 MNAILNKNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIYMCDKHKQKPATIASKRMFD 60
+NAI+NKNSAD K C +Y +LFPCNECAK+IIQ+GIKEVI+M DK+ T A++ MF
Sbjct: 93 LNAIMNKNSADVKGCSMYVALFPCNECAKLIIQAGIKEVIFMSDKYHDSEETTAARLMFK 152
Query: 61 AAKVHY 66
A V +
Sbjct: 153 LAGVTF 158
>gi|344243563|gb|EGV99666.1| Deoxycytidylate deaminase [Cricetulus griseus]
Length = 178
Score = 179 bits (453), Expect = 7e-43, Method: Compositional matrix adjust.
Identities = 83/125 (66%), Positives = 99/125 (79%), Gaps = 5/125 (4%)
Query: 83 KRVDDVLEWHEYFMASAFLVAKRSKDPVTRVGAVIVNEDNKIVGTGYNGMPIGCSDDEFP 142
K+ DD LEW EYFMA AFL A+RSKDP ++VGA IVN +NKIVG GYNGMP GCSDD P
Sbjct: 7 KKRDDYLEWPEYFMAVAFLSAQRSKDPSSQVGACIVNTENKIVGIGYNGMPNGCSDDLLP 66
Query: 143 WDKNTHDELD-----MCHAEMNAILNKNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVI 197
W + ++LD +CHAE+NAI+NKNSAD K C +Y +LFPCNECAK+IIQ+GIKEVI
Sbjct: 67 WRRTAENKLDTKYPYVCHAELNAIMNKNSADVKGCSMYVALFPCNECAKLIIQAGIKEVI 126
Query: 198 YMCDK 202
+M DK
Sbjct: 127 FMSDK 131
Score = 86.7 bits (213), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 39/66 (59%), Positives = 50/66 (75%)
Query: 1 MNAILNKNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIYMCDKHKQKPATIASKRMFD 60
+NAI+NKNSAD K C +Y +LFPCNECAK+IIQ+GIKEVI+M DK+ T A++ MF
Sbjct: 87 LNAIMNKNSADVKGCSMYVALFPCNECAKLIIQAGIKEVIFMSDKYHDSEETTAARLMFK 146
Query: 61 AAKVHY 66
A V +
Sbjct: 147 LAGVTF 152
>gi|238859570|ref|NP_848903.2| deoxycytidylate deaminase [Mus musculus]
gi|238859573|ref|NP_001154987.1| deoxycytidylate deaminase [Mus musculus]
gi|238859575|ref|NP_001154988.1| deoxycytidylate deaminase [Mus musculus]
gi|148703670|gb|EDL35617.1| dCMP deaminase, isoform CRA_a [Mus musculus]
gi|148703671|gb|EDL35618.1| dCMP deaminase, isoform CRA_a [Mus musculus]
Length = 184
Score = 179 bits (453), Expect = 8e-43, Method: Compositional matrix adjust.
Identities = 83/125 (66%), Positives = 99/125 (79%), Gaps = 5/125 (4%)
Query: 83 KRVDDVLEWHEYFMASAFLVAKRSKDPVTRVGAVIVNEDNKIVGTGYNGMPIGCSDDEFP 142
K+ DD LEW EYFMA AFL A+RSKDP ++VGA IVN +NKIVG GYNGMP GCSDD P
Sbjct: 13 KKRDDYLEWPEYFMAVAFLSAQRSKDPSSQVGACIVNTENKIVGIGYNGMPNGCSDDLLP 72
Query: 143 WDKNTHDELD-----MCHAEMNAILNKNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVI 197
W + ++LD +CHAE+NAI+NKNSAD K C +Y +LFPCNECAK+IIQ+GIKEVI
Sbjct: 73 WRRTAENKLDTKYPYVCHAELNAIMNKNSADVKGCSMYVALFPCNECAKLIIQAGIKEVI 132
Query: 198 YMCDK 202
+M DK
Sbjct: 133 FMSDK 137
Score = 85.5 bits (210), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 38/66 (57%), Positives = 50/66 (75%)
Query: 1 MNAILNKNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIYMCDKHKQKPATIASKRMFD 60
+NAI+NKNSAD K C +Y +LFPCNECAK+IIQ+GIKEVI+M DK+ T A++ +F
Sbjct: 93 LNAIMNKNSADVKGCSMYVALFPCNECAKLIIQAGIKEVIFMSDKYHDSEETTAARLLFK 152
Query: 61 AAKVHY 66
A V +
Sbjct: 153 LAGVTF 158
>gi|238859561|ref|NP_001013904.2| deoxycytidylate deaminase isoform 1 [Rattus norvegicus]
gi|149021459|gb|EDL78922.1| similar to 6030466N05Rik protein, isoform CRA_a [Rattus norvegicus]
gi|149021460|gb|EDL78923.1| similar to 6030466N05Rik protein, isoform CRA_a [Rattus norvegicus]
Length = 184
Score = 179 bits (453), Expect = 9e-43, Method: Compositional matrix adjust.
Identities = 83/125 (66%), Positives = 99/125 (79%), Gaps = 5/125 (4%)
Query: 83 KRVDDVLEWHEYFMASAFLVAKRSKDPVTRVGAVIVNEDNKIVGTGYNGMPIGCSDDEFP 142
K+ DD LEW EYFMA AFL A+RSKDP ++VGA IVN +NKIVG GYNGMP GCSDD P
Sbjct: 13 KKRDDYLEWPEYFMAVAFLSAQRSKDPSSQVGACIVNTENKIVGIGYNGMPNGCSDDLLP 72
Query: 143 WDKNTHDELD-----MCHAEMNAILNKNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVI 197
W + ++LD +CHAE+NAI+NKNSAD K C +Y +LFPCNECAK+IIQ+GIKEVI
Sbjct: 73 WRRTAENKLDTKYPYVCHAELNAIMNKNSADVKGCSMYVALFPCNECAKLIIQAGIKEVI 132
Query: 198 YMCDK 202
+M DK
Sbjct: 133 FMSDK 137
Score = 85.1 bits (209), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 38/66 (57%), Positives = 50/66 (75%)
Query: 1 MNAILNKNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIYMCDKHKQKPATIASKRMFD 60
+NAI+NKNSAD K C +Y +LFPCNECAK+IIQ+GIKEVI+M DK+ T A++ +F
Sbjct: 93 LNAIMNKNSADVKGCSMYVALFPCNECAKLIIQAGIKEVIFMSDKYHDSEETTAARLLFK 152
Query: 61 AAKVHY 66
A V +
Sbjct: 153 LAGVTF 158
>gi|57530125|ref|NP_001006444.1| deoxycytidylate deaminase [Gallus gallus]
gi|53133480|emb|CAG32069.1| hypothetical protein RCJMB04_17c11 [Gallus gallus]
Length = 190
Score = 179 bits (453), Expect = 9e-43, Method: Compositional matrix adjust.
Identities = 85/135 (62%), Positives = 102/135 (75%), Gaps = 5/135 (3%)
Query: 73 MNGVQNGSPHKRVDDVLEWHEYFMASAFLVAKRSKDPVTRVGAVIVNEDNKIVGTGYNGM 132
+NG N + K+ +D LEW EYFMA AFL A+RSKDP ++VGA IVN +NKIVG GYNGM
Sbjct: 9 VNGFGNEASCKKREDYLEWPEYFMAVAFLSAQRSKDPSSQVGACIVNSENKIVGIGYNGM 68
Query: 133 PIGCSDDEFPWDKNTHDELD-----MCHAEMNAILNKNSADTKRCKLYTSLFPCNECAKV 187
P GCSDD PW + LD +CHAE+NAI+NKNSAD K C +Y +LFPCNECAK+
Sbjct: 69 PNGCSDDVLPWTRAAAHSLDTKYPYVCHAELNAIMNKNSADVKGCSMYVALFPCNECAKL 128
Query: 188 IIQSGIKEVIYMCDK 202
IIQ+GIKEVI+M DK
Sbjct: 129 IIQAGIKEVIFMSDK 143
Score = 89.7 bits (221), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 40/66 (60%), Positives = 51/66 (77%)
Query: 1 MNAILNKNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIYMCDKHKQKPATIASKRMFD 60
+NAI+NKNSAD K C +Y +LFPCNECAK+IIQ+GIKEVI+M DK+ A++RMFD
Sbjct: 99 LNAIMNKNSADVKGCSMYVALFPCNECAKLIIQAGIKEVIFMSDKYHDSIEMTAARRMFD 158
Query: 61 AAKVHY 66
A + Y
Sbjct: 159 LAGIVY 164
>gi|62286456|sp|Q5M9G0.1|DCTD_RAT RecName: Full=Deoxycytidylate deaminase; AltName: Full=dCMP
deaminase
gi|62286567|sp|Q8K2D6.1|DCTD_MOUSE RecName: Full=Deoxycytidylate deaminase; AltName: Full=dCMP
deaminase
gi|21619349|gb|AAH31719.1| Dctd protein [Mus musculus]
gi|26327497|dbj|BAC27492.1| unnamed protein product [Mus musculus]
gi|26333023|dbj|BAC30229.1| unnamed protein product [Mus musculus]
gi|56540886|gb|AAH87138.1| DCMP deaminase [Rattus norvegicus]
Length = 178
Score = 178 bits (452), Expect = 9e-43, Method: Compositional matrix adjust.
Identities = 83/125 (66%), Positives = 99/125 (79%), Gaps = 5/125 (4%)
Query: 83 KRVDDVLEWHEYFMASAFLVAKRSKDPVTRVGAVIVNEDNKIVGTGYNGMPIGCSDDEFP 142
K+ DD LEW EYFMA AFL A+RSKDP ++VGA IVN +NKIVG GYNGMP GCSDD P
Sbjct: 7 KKRDDYLEWPEYFMAVAFLSAQRSKDPSSQVGACIVNTENKIVGIGYNGMPNGCSDDLLP 66
Query: 143 WDKNTHDELD-----MCHAEMNAILNKNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVI 197
W + ++LD +CHAE+NAI+NKNSAD K C +Y +LFPCNECAK+IIQ+GIKEVI
Sbjct: 67 WRRTAENKLDTKYPYVCHAELNAIMNKNSADVKGCSMYVALFPCNECAKLIIQAGIKEVI 126
Query: 198 YMCDK 202
+M DK
Sbjct: 127 FMSDK 131
Score = 85.5 bits (210), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 38/66 (57%), Positives = 50/66 (75%)
Query: 1 MNAILNKNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIYMCDKHKQKPATIASKRMFD 60
+NAI+NKNSAD K C +Y +LFPCNECAK+IIQ+GIKEVI+M DK+ T A++ +F
Sbjct: 87 LNAIMNKNSADVKGCSMYVALFPCNECAKLIIQAGIKEVIFMSDKYHDSEETTAARLLFK 146
Query: 61 AAKVHY 66
A V +
Sbjct: 147 LAGVTF 152
>gi|395542348|ref|XP_003773095.1| PREDICTED: deoxycytidylate deaminase [Sarcophilus harrisii]
Length = 283
Score = 178 bits (452), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 83/125 (66%), Positives = 98/125 (78%), Gaps = 5/125 (4%)
Query: 83 KRVDDVLEWHEYFMASAFLVAKRSKDPVTRVGAVIVNEDNKIVGTGYNGMPIGCSDDEFP 142
K+ DD LEW EYFMA AFL A+RSKDP ++VGA I+N +NKIVG GYNGMP GCSDD P
Sbjct: 113 KKRDDYLEWPEYFMAVAFLSAQRSKDPNSQVGACIINAENKIVGIGYNGMPNGCSDDLLP 172
Query: 143 WDKNTHDELD-----MCHAEMNAILNKNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVI 197
W + +LD +CHAE+NAI+NKNSAD K C +Y +LFPCNECAK+IIQ+GIKEVI
Sbjct: 173 WRRTADSKLDTKYPYVCHAELNAIMNKNSADVKGCTMYVALFPCNECAKLIIQAGIKEVI 232
Query: 198 YMCDK 202
YM DK
Sbjct: 233 YMSDK 237
Score = 89.7 bits (221), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 40/66 (60%), Positives = 51/66 (77%)
Query: 1 MNAILNKNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIYMCDKHKQKPATIASKRMFD 60
+NAI+NKNSAD K C +Y +LFPCNECAK+IIQ+GIKEVIYM DK+ T A++ MFD
Sbjct: 193 LNAIMNKNSADVKGCTMYVALFPCNECAKLIIQAGIKEVIYMSDKYHDSDETTAARLMFD 252
Query: 61 AAKVHY 66
A + +
Sbjct: 253 LAGIKF 258
>gi|194044048|ref|XP_001925118.1| PREDICTED: deoxycytidylate deaminase-like [Sus scrofa]
Length = 178
Score = 178 bits (451), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 84/127 (66%), Positives = 99/127 (77%), Gaps = 5/127 (3%)
Query: 81 PHKRVDDVLEWHEYFMASAFLVAKRSKDPVTRVGAVIVNEDNKIVGTGYNGMPIGCSDDE 140
P K+ DD LEW EYFMA AFL A+RSKDP ++VGA IVN +NKIVG GYNGMP GCSDD
Sbjct: 5 PCKKRDDYLEWPEYFMAVAFLSAQRSKDPNSQVGACIVNAENKIVGIGYNGMPNGCSDDL 64
Query: 141 FPWDKNTHDELD-----MCHAEMNAILNKNSADTKRCKLYTSLFPCNECAKVIIQSGIKE 195
PW + + LD +CHAE+NAI+NKNSAD K C +Y +LFPCNECAK+IIQ+GIKE
Sbjct: 65 LPWRRTAENILDTKYPYVCHAELNAIMNKNSADVKGCTMYVALFPCNECAKLIIQAGIKE 124
Query: 196 VIYMCDK 202
VI+M DK
Sbjct: 125 VIFMSDK 131
Score = 87.4 bits (215), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 39/66 (59%), Positives = 51/66 (77%)
Query: 1 MNAILNKNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIYMCDKHKQKPATIASKRMFD 60
+NAI+NKNSAD K C +Y +LFPCNECAK+IIQ+GIKEVI+M DK+ T A++ MF+
Sbjct: 87 LNAIMNKNSADVKGCTMYVALFPCNECAKLIIQAGIKEVIFMSDKYHDSNETTAARLMFE 146
Query: 61 AAKVHY 66
A V +
Sbjct: 147 MAGVSF 152
>gi|326918570|ref|XP_003205561.1| PREDICTED: deoxycytidylate deaminase-like [Meleagris gallopavo]
Length = 190
Score = 178 bits (451), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 84/135 (62%), Positives = 102/135 (75%), Gaps = 5/135 (3%)
Query: 73 MNGVQNGSPHKRVDDVLEWHEYFMASAFLVAKRSKDPVTRVGAVIVNEDNKIVGTGYNGM 132
+NG + + K+ +D LEW EYFMA AFL A+RSKDP ++VGA IVN +NKIVG GYNGM
Sbjct: 9 VNGFGDEASCKKREDYLEWPEYFMAVAFLSAQRSKDPSSQVGACIVNSENKIVGIGYNGM 68
Query: 133 PIGCSDDEFPWDKNTHDELD-----MCHAEMNAILNKNSADTKRCKLYTSLFPCNECAKV 187
P GCSDD PW + LD +CHAE+NAI+NKNSAD K C +Y +LFPCNECAK+
Sbjct: 69 PNGCSDDALPWTRTAAHRLDTKYPYVCHAELNAIMNKNSADVKGCSMYVALFPCNECAKL 128
Query: 188 IIQSGIKEVIYMCDK 202
IIQ+GIKEVI+M DK
Sbjct: 129 IIQAGIKEVIFMSDK 143
Score = 89.7 bits (221), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 40/66 (60%), Positives = 51/66 (77%)
Query: 1 MNAILNKNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIYMCDKHKQKPATIASKRMFD 60
+NAI+NKNSAD K C +Y +LFPCNECAK+IIQ+GIKEVI+M DK+ A++RMFD
Sbjct: 99 LNAIMNKNSADVKGCSMYVALFPCNECAKLIIQAGIKEVIFMSDKYHDSIEMTAARRMFD 158
Query: 61 AAKVHY 66
A + Y
Sbjct: 159 LAGIVY 164
>gi|299115986|emb|CBN75987.1| conserved unknown protein [Ectocarpus siliculosus]
Length = 284
Score = 178 bits (451), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 81/121 (66%), Positives = 95/121 (78%), Gaps = 5/121 (4%)
Query: 87 DVLEWHEYFMASAFLVAKRSKDPVTRVGAVIVNEDNKIVGTGYNGMPIGCSDDEFPWDKN 146
D L W +YFM+ AFL A RSKDP T+VGA IVNED +IVG GYNG P+GCSDD+ PW +
Sbjct: 124 DYLVWDDYFMSVAFLSAMRSKDPSTQVGACIVNEDKRIVGIGYNGFPMGCSDDDLPWARQ 183
Query: 147 THDELD-----MCHAEMNAILNKNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIYMCD 201
DELD +CHAEMNAILNKNSAD K C +Y +LFPCNECAK+IIQSGI+EV+Y+ D
Sbjct: 184 ADDELDTKYPYVCHAEMNAILNKNSADVKGCLIYVALFPCNECAKLIIQSGIREVVYLSD 243
Query: 202 K 202
K
Sbjct: 244 K 244
Score = 91.7 bits (226), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 40/64 (62%), Positives = 53/64 (82%)
Query: 1 MNAILNKNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIYMCDKHKQKPATIASKRMFD 60
MNAILNKNSAD K C +Y +LFPCNECAK+IIQSGI+EV+Y+ DK+++ + AS+R+FD
Sbjct: 200 MNAILNKNSADVKGCLIYVALFPCNECAKLIIQSGIREVVYLSDKYRETNSMKASRRLFD 259
Query: 61 AAKV 64
+ V
Sbjct: 260 LSGV 263
>gi|449500693|ref|XP_002190430.2| PREDICTED: deoxycytidylate deaminase [Taeniopygia guttata]
Length = 307
Score = 177 bits (450), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 82/125 (65%), Positives = 98/125 (78%), Gaps = 5/125 (4%)
Query: 83 KRVDDVLEWHEYFMASAFLVAKRSKDPVTRVGAVIVNEDNKIVGTGYNGMPIGCSDDEFP 142
K+ +D LEW EYFMA AFL A+RSKDP ++VGA IVN +NKIVG GYNGMP GCSDD P
Sbjct: 136 KKREDYLEWPEYFMAVAFLSAQRSKDPSSQVGACIVNSENKIVGIGYNGMPNGCSDDVLP 195
Query: 143 WDKNTHDELD-----MCHAEMNAILNKNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVI 197
W + + LD +CHAE+NAI+NKNSAD K C +Y +LFPCNECAK+IIQ+GIKEVI
Sbjct: 196 WTRTGANRLDTKYPYVCHAELNAIMNKNSADVKGCSMYVALFPCNECAKLIIQAGIKEVI 255
Query: 198 YMCDK 202
+M DK
Sbjct: 256 FMSDK 260
Score = 90.1 bits (222), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 42/76 (55%), Positives = 54/76 (71%)
Query: 1 MNAILNKNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIYMCDKHKQKPATIASKRMFD 60
+NAI+NKNSAD K C +Y +LFPCNECAK+IIQ+GIKEVI+M DK+ A++RMFD
Sbjct: 216 LNAIMNKNSADVKGCSMYVALFPCNECAKLIIQAGIKEVIFMSDKYHDTTEMTAARRMFD 275
Query: 61 AAKVHYWSEMDKMNGV 76
A + Y K N +
Sbjct: 276 LAGIIYREFKPKCNKI 291
>gi|297674745|ref|XP_002815372.1| PREDICTED: deoxycytidylate deaminase isoform 2 [Pongo abelii]
gi|297674747|ref|XP_002815373.1| PREDICTED: deoxycytidylate deaminase isoform 3 [Pongo abelii]
gi|395735531|ref|XP_003776601.1| PREDICTED: deoxycytidylate deaminase [Pongo abelii]
gi|62286511|sp|Q5RC69.1|DCTD_PONAB RecName: Full=Deoxycytidylate deaminase; AltName: Full=dCMP
deaminase
gi|55727775|emb|CAH90638.1| hypothetical protein [Pongo abelii]
Length = 178
Score = 177 bits (450), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 82/125 (65%), Positives = 99/125 (79%), Gaps = 5/125 (4%)
Query: 83 KRVDDVLEWHEYFMASAFLVAKRSKDPVTRVGAVIVNEDNKIVGTGYNGMPIGCSDDEFP 142
K+ DD LEW EYFMA AFL A+RSKDP ++VGA IVN +NKIVG GYNGMP GCSDD+ P
Sbjct: 7 KKRDDYLEWPEYFMAVAFLSAQRSKDPNSQVGACIVNSENKIVGIGYNGMPNGCSDDQLP 66
Query: 143 WDKNTHDELD-----MCHAEMNAILNKNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVI 197
W + ++LD +CHAE+NAI+NKNS D K C +Y +LFPCNECAK+IIQ+GIKEVI
Sbjct: 67 WRRTAKNKLDTKYPYVCHAELNAIMNKNSTDVKGCSMYVALFPCNECAKLIIQAGIKEVI 126
Query: 198 YMCDK 202
+M DK
Sbjct: 127 FMSDK 131
Score = 84.3 bits (207), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 37/66 (56%), Positives = 49/66 (74%)
Query: 1 MNAILNKNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIYMCDKHKQKPATIASKRMFD 60
+NAI+NKNS D K C +Y +LFPCNECAK+IIQ+GIKEVI+M DK+ A++ +FD
Sbjct: 87 LNAIMNKNSTDVKGCSMYVALFPCNECAKLIIQAGIKEVIFMSDKYHDSDEATAARLLFD 146
Query: 61 AAKVHY 66
A V +
Sbjct: 147 MAGVTF 152
>gi|395840058|ref|XP_003792884.1| PREDICTED: deoxycytidylate deaminase [Otolemur garnettii]
Length = 241
Score = 177 bits (449), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 83/125 (66%), Positives = 98/125 (78%), Gaps = 5/125 (4%)
Query: 83 KRVDDVLEWHEYFMASAFLVAKRSKDPVTRVGAVIVNEDNKIVGTGYNGMPIGCSDDEFP 142
K+ DD LEW EYFMA AFL A+RSKDP ++VGA IVN +NKIVG GYNGMP GCSDD P
Sbjct: 7 KKRDDYLEWPEYFMAVAFLSAQRSKDPNSQVGACIVNTENKIVGIGYNGMPNGCSDDLLP 66
Query: 143 WDKNTHDELD-----MCHAEMNAILNKNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVI 197
W + + LD +CHAE+NAI+NKNSAD K C +Y +LFPCNECAK+IIQ+GIKEVI
Sbjct: 67 WRRTAENRLDTKYPYVCHAELNAIMNKNSADVKGCSMYVALFPCNECAKLIIQAGIKEVI 126
Query: 198 YMCDK 202
+M DK
Sbjct: 127 FMSDK 131
Score = 83.2 bits (204), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 39/76 (51%), Positives = 52/76 (68%)
Query: 1 MNAILNKNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIYMCDKHKQKPATIASKRMFD 60
+NAI+NKNSAD K C +Y +LFPCNECAK+IIQ+GIKEVI+M DK+ T A++ +
Sbjct: 87 LNAIMNKNSADVKGCSMYVALFPCNECAKLIIQAGIKEVIFMSDKYHDSDETKAARLLLS 146
Query: 61 AAKVHYWSEMDKMNGV 76
A V + K N +
Sbjct: 147 MAGVTFRKFTPKCNKI 162
>gi|351715831|gb|EHB18750.1| Deoxycytidylate deaminase, partial [Heterocephalus glaber]
Length = 180
Score = 177 bits (449), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 83/125 (66%), Positives = 99/125 (79%), Gaps = 5/125 (4%)
Query: 83 KRVDDVLEWHEYFMASAFLVAKRSKDPVTRVGAVIVNEDNKIVGTGYNGMPIGCSDDEFP 142
K+ DD LEW EYFMA AFL A+RSKDP ++VGA IVN +NKIVG GYNGMP GCSDD P
Sbjct: 9 KKRDDYLEWPEYFMAVAFLSAQRSKDPNSQVGACIVNAENKIVGIGYNGMPNGCSDDLLP 68
Query: 143 WDKNTHDELD-----MCHAEMNAILNKNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVI 197
W + ++LD +CHAE+NAI+NKNSAD K C +Y +LFPCNECAK+IIQ+GIKEVI
Sbjct: 69 WRRTAENKLDTKYPYVCHAELNAIMNKNSADVKGCSMYVALFPCNECAKLIIQAGIKEVI 128
Query: 198 YMCDK 202
+M DK
Sbjct: 129 FMSDK 133
Score = 86.7 bits (213), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 39/66 (59%), Positives = 51/66 (77%)
Query: 1 MNAILNKNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIYMCDKHKQKPATIASKRMFD 60
+NAI+NKNSAD K C +Y +LFPCNECAK+IIQ+GIKEVI+M DK+ T A++ MF+
Sbjct: 89 LNAIMNKNSADVKGCSMYVALFPCNECAKLIIQAGIKEVIFMSDKYHDSDETTAARLMFE 148
Query: 61 AAKVHY 66
A V +
Sbjct: 149 MAGVIF 154
>gi|155372299|ref|NP_001094762.1| deoxycytidylate deaminase [Bos taurus]
gi|151555965|gb|AAI49762.1| DCTD protein [Bos taurus]
gi|296472434|tpg|DAA14549.1| TPA: dCMP deaminase [Bos taurus]
Length = 178
Score = 177 bits (449), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 83/127 (65%), Positives = 99/127 (77%), Gaps = 5/127 (3%)
Query: 81 PHKRVDDVLEWHEYFMASAFLVAKRSKDPVTRVGAVIVNEDNKIVGTGYNGMPIGCSDDE 140
P ++ DD LEW EYFMA AFL A+RSKDP ++VGA IVN +NKIVG GYNGMP GCSDD
Sbjct: 5 PCRKRDDYLEWPEYFMAVAFLSAQRSKDPNSQVGACIVNAENKIVGIGYNGMPNGCSDDL 64
Query: 141 FPWDKNTHDELD-----MCHAEMNAILNKNSADTKRCKLYTSLFPCNECAKVIIQSGIKE 195
PW + + LD +CHAE+NAI+NKNSAD K C +Y +LFPCNECAK+IIQ+GIKE
Sbjct: 65 LPWRRTAENILDTKYPYVCHAELNAIMNKNSADVKGCTMYVALFPCNECAKLIIQAGIKE 124
Query: 196 VIYMCDK 202
VI+M DK
Sbjct: 125 VIFMSDK 131
Score = 86.3 bits (212), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 38/66 (57%), Positives = 51/66 (77%)
Query: 1 MNAILNKNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIYMCDKHKQKPATIASKRMFD 60
+NAI+NKNSAD K C +Y +LFPCNECAK+IIQ+GIKEVI+M DK+ T A++ +F+
Sbjct: 87 LNAIMNKNSADVKGCTMYVALFPCNECAKLIIQAGIKEVIFMSDKYHDSNETTAARLLFE 146
Query: 61 AAKVHY 66
A V +
Sbjct: 147 MAGVSF 152
>gi|426256212|ref|XP_004021735.1| PREDICTED: deoxycytidylate deaminase [Ovis aries]
gi|339522165|gb|AEJ84247.1| deoxycytidylate deaminase [Capra hircus]
Length = 178
Score = 177 bits (449), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 83/127 (65%), Positives = 99/127 (77%), Gaps = 5/127 (3%)
Query: 81 PHKRVDDVLEWHEYFMASAFLVAKRSKDPVTRVGAVIVNEDNKIVGTGYNGMPIGCSDDE 140
P ++ DD LEW EYFMA AFL A+RSKDP ++VGA IVN +NKIVG GYNGMP GCSDD
Sbjct: 5 PCRKRDDYLEWPEYFMAVAFLSAQRSKDPNSQVGACIVNAENKIVGIGYNGMPNGCSDDL 64
Query: 141 FPWDKNTHDELD-----MCHAEMNAILNKNSADTKRCKLYTSLFPCNECAKVIIQSGIKE 195
PW + + LD +CHAE+NAI+NKNSAD K C +Y +LFPCNECAK+IIQ+GIKE
Sbjct: 65 LPWRRTAENILDTKYPYVCHAELNAIMNKNSADVKGCTMYVALFPCNECAKLIIQAGIKE 124
Query: 196 VIYMCDK 202
VI+M DK
Sbjct: 125 VIFMSDK 131
Score = 86.7 bits (213), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 38/66 (57%), Positives = 51/66 (77%)
Query: 1 MNAILNKNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIYMCDKHKQKPATIASKRMFD 60
+NAI+NKNSAD K C +Y +LFPCNECAK+IIQ+GIKEVI+M DK+ T A++ MF+
Sbjct: 87 LNAIMNKNSADVKGCTMYVALFPCNECAKLIIQAGIKEVIFMSDKYHDSNETTAARLMFE 146
Query: 61 AAKVHY 66
A + +
Sbjct: 147 MAGISF 152
>gi|62858897|ref|NP_001016265.1| dCMP deaminase [Xenopus (Silurana) tropicalis]
gi|89266721|emb|CAJ83844.1| deoxycytidylate deaminase [Xenopus (Silurana) tropicalis]
Length = 190
Score = 177 bits (449), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 83/134 (61%), Positives = 101/134 (75%), Gaps = 5/134 (3%)
Query: 74 NGVQNGSPHKRVDDVLEWHEYFMASAFLVAKRSKDPVTRVGAVIVNEDNKIVGTGYNGMP 133
NG+ S K+ +D LEW EYFMA AFL A+RSKDP ++VGA IVN +NKIVG GYNGMP
Sbjct: 9 NGMAANSLSKKREDYLEWCEYFMAVAFLAAQRSKDPNSQVGACIVNSENKIVGIGYNGMP 68
Query: 134 IGCSDDEFPWDKNTHDELD-----MCHAEMNAILNKNSADTKRCKLYTSLFPCNECAKVI 188
GC DD PW + D LD +CHAE+NAI+NKN+AD K C +Y +LFPCNECAK++
Sbjct: 69 NGCHDDVLPWARTAEDRLDTKYPYVCHAELNAIMNKNTADVKGCTMYVALFPCNECAKLV 128
Query: 189 IQSGIKEVIYMCDK 202
IQ+GIKEVI+M DK
Sbjct: 129 IQAGIKEVIFMSDK 142
Score = 89.0 bits (219), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 38/66 (57%), Positives = 51/66 (77%)
Query: 1 MNAILNKNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIYMCDKHKQKPATIASKRMFD 60
+NAI+NKN+AD K C +Y +LFPCNECAK++IQ+GIKEVI+M DK+ P A++ MFD
Sbjct: 98 LNAIMNKNTADVKGCTMYVALFPCNECAKLVIQAGIKEVIFMSDKYHDSPDMKAARHMFD 157
Query: 61 AAKVHY 66
A + Y
Sbjct: 158 LAGIKY 163
>gi|26346577|dbj|BAC36937.1| unnamed protein product [Mus musculus]
Length = 178
Score = 177 bits (449), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 83/125 (66%), Positives = 98/125 (78%), Gaps = 5/125 (4%)
Query: 83 KRVDDVLEWHEYFMASAFLVAKRSKDPVTRVGAVIVNEDNKIVGTGYNGMPIGCSDDEFP 142
K+ DD LEW EYFMA AFL A+RSKDP +VGA IVN +NKIVG GYNGMP GCSDD P
Sbjct: 7 KKRDDYLEWPEYFMAVAFLSAQRSKDPSFQVGACIVNTENKIVGIGYNGMPNGCSDDLLP 66
Query: 143 WDKNTHDELD-----MCHAEMNAILNKNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVI 197
W + ++LD +CHAE+NAI+NKNSAD K C +Y +LFPCNECAK+IIQ+GIKEVI
Sbjct: 67 WRRTAENKLDTKYPYVCHAELNAIMNKNSADVKGCSMYVALFPCNECAKLIIQAGIKEVI 126
Query: 198 YMCDK 202
+M DK
Sbjct: 127 FMSDK 131
Score = 85.1 bits (209), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 38/66 (57%), Positives = 50/66 (75%)
Query: 1 MNAILNKNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIYMCDKHKQKPATIASKRMFD 60
+NAI+NKNSAD K C +Y +LFPCNECAK+IIQ+GIKEVI+M DK+ T A++ +F
Sbjct: 87 LNAIMNKNSADVKGCSMYVALFPCNECAKLIIQAGIKEVIFMSDKYHDSEETTAARLLFK 146
Query: 61 AAKVHY 66
A V +
Sbjct: 147 LAGVTF 152
>gi|403285163|ref|XP_003933906.1| PREDICTED: deoxycytidylate deaminase isoform 1 [Saimiri boliviensis
boliviensis]
gi|403285165|ref|XP_003933907.1| PREDICTED: deoxycytidylate deaminase isoform 2 [Saimiri boliviensis
boliviensis]
Length = 178
Score = 177 bits (449), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 82/126 (65%), Positives = 98/126 (77%), Gaps = 5/126 (3%)
Query: 82 HKRVDDVLEWHEYFMASAFLVAKRSKDPVTRVGAVIVNEDNKIVGTGYNGMPIGCSDDEF 141
+K+ DD LEW EYFMA AFL A+RSKDP ++VGA IVN +NKIVG GYNGMP GCSDD
Sbjct: 6 YKKRDDYLEWPEYFMAVAFLSAQRSKDPNSQVGACIVNSENKIVGIGYNGMPNGCSDDLL 65
Query: 142 PWDKNTHDELD-----MCHAEMNAILNKNSADTKRCKLYTSLFPCNECAKVIIQSGIKEV 196
PW + +LD +CHAE+NAI+NKNS D K C +Y +LFPCNECAK+IIQ+GIKEV
Sbjct: 66 PWRRTAESKLDTKYPYVCHAELNAIMNKNSTDVKGCSMYVALFPCNECAKLIIQAGIKEV 125
Query: 197 IYMCDK 202
I+M DK
Sbjct: 126 IFMSDK 131
Score = 85.9 bits (211), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 38/66 (57%), Positives = 49/66 (74%)
Query: 1 MNAILNKNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIYMCDKHKQKPATIASKRMFD 60
+NAI+NKNS D K C +Y +LFPCNECAK+IIQ+GIKEVI+M DK+ A++ MFD
Sbjct: 87 LNAIMNKNSTDVKGCSMYVALFPCNECAKLIIQAGIKEVIFMSDKYHDSDEATAARLMFD 146
Query: 61 AAKVHY 66
A V +
Sbjct: 147 MAGVAF 152
>gi|440899720|gb|ELR50984.1| Deoxycytidylate deaminase, partial [Bos grunniens mutus]
Length = 185
Score = 177 bits (448), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 83/127 (65%), Positives = 99/127 (77%), Gaps = 5/127 (3%)
Query: 81 PHKRVDDVLEWHEYFMASAFLVAKRSKDPVTRVGAVIVNEDNKIVGTGYNGMPIGCSDDE 140
P ++ DD LEW EYFMA AFL A+RSKDP ++VGA IVN +NKIVG GYNGMP GCSDD
Sbjct: 12 PCRKRDDYLEWPEYFMAVAFLSAQRSKDPNSQVGACIVNAENKIVGIGYNGMPNGCSDDL 71
Query: 141 FPWDKNTHDELD-----MCHAEMNAILNKNSADTKRCKLYTSLFPCNECAKVIIQSGIKE 195
PW + + LD +CHAE+NAI+NKNSAD K C +Y +LFPCNECAK+IIQ+GIKE
Sbjct: 72 LPWRRTAENILDTKYPYVCHAELNAIMNKNSADVKGCTMYVALFPCNECAKLIIQAGIKE 131
Query: 196 VIYMCDK 202
VI+M DK
Sbjct: 132 VIFMSDK 138
Score = 85.9 bits (211), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 38/66 (57%), Positives = 51/66 (77%)
Query: 1 MNAILNKNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIYMCDKHKQKPATIASKRMFD 60
+NAI+NKNSAD K C +Y +LFPCNECAK+IIQ+GIKEVI+M DK+ T A++ +F+
Sbjct: 94 LNAIMNKNSADVKGCTMYVALFPCNECAKLIIQAGIKEVIFMSDKYHDSNETTAARLLFE 153
Query: 61 AAKVHY 66
A V +
Sbjct: 154 MAGVSF 159
>gi|281354625|gb|EFB30209.1| hypothetical protein PANDA_001894 [Ailuropoda melanoleuca]
Length = 182
Score = 177 bits (448), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 83/127 (65%), Positives = 99/127 (77%), Gaps = 5/127 (3%)
Query: 81 PHKRVDDVLEWHEYFMASAFLVAKRSKDPVTRVGAVIVNEDNKIVGTGYNGMPIGCSDDE 140
P K+ DD LEW EYFMA AFL A+RSKDP ++VGA IVN +NKIVG GYNGMP GCSDD
Sbjct: 10 PCKKRDDYLEWPEYFMAVAFLSAQRSKDPNSQVGACIVNAENKIVGIGYNGMPNGCSDDL 69
Query: 141 FPWDKNTHDELD-----MCHAEMNAILNKNSADTKRCKLYTSLFPCNECAKVIIQSGIKE 195
PW + +LD +CHAE+NAI+NKNSAD K C +Y +LFPCNECAK+IIQ+GIKE
Sbjct: 70 LPWRRTAESKLDTKYPYVCHAELNAIMNKNSADVKGCTMYVALFPCNECAKLIIQAGIKE 129
Query: 196 VIYMCDK 202
VI++ DK
Sbjct: 130 VIFISDK 136
Score = 86.3 bits (212), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 38/66 (57%), Positives = 51/66 (77%)
Query: 1 MNAILNKNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIYMCDKHKQKPATIASKRMFD 60
+NAI+NKNSAD K C +Y +LFPCNECAK+IIQ+GIKEVI++ DK+ A++R+FD
Sbjct: 92 LNAIMNKNSADVKGCTMYVALFPCNECAKLIIQAGIKEVIFISDKYHDSDEMTAARRLFD 151
Query: 61 AAKVHY 66
A V +
Sbjct: 152 MAGVAF 157
>gi|355687739|gb|EHH26323.1| hypothetical protein EGK_16265, partial [Macaca mulatta]
gi|355749683|gb|EHH54082.1| hypothetical protein EGM_14840, partial [Macaca fascicularis]
Length = 180
Score = 176 bits (447), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 82/125 (65%), Positives = 98/125 (78%), Gaps = 5/125 (4%)
Query: 83 KRVDDVLEWHEYFMASAFLVAKRSKDPVTRVGAVIVNEDNKIVGTGYNGMPIGCSDDEFP 142
K+ DD LEW EYFMA AFL A+RSKDP ++VGA IVN +NKIVG GYNGMP GCSDD P
Sbjct: 9 KKRDDYLEWPEYFMAVAFLSAQRSKDPNSQVGACIVNSENKIVGIGYNGMPNGCSDDLLP 68
Query: 143 WDKNTHDELD-----MCHAEMNAILNKNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVI 197
W + ++LD +CHAE+NAI+NKNS D K C +Y +LFPCNECAK+IIQ+GIKEVI
Sbjct: 69 WSRTAENKLDTKYPYVCHAELNAIMNKNSTDVKGCSMYVALFPCNECAKLIIQAGIKEVI 128
Query: 198 YMCDK 202
+M DK
Sbjct: 129 FMSDK 133
Score = 84.3 bits (207), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 37/66 (56%), Positives = 49/66 (74%)
Query: 1 MNAILNKNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIYMCDKHKQKPATIASKRMFD 60
+NAI+NKNS D K C +Y +LFPCNECAK+IIQ+GIKEVI+M DK+ A++ +FD
Sbjct: 89 LNAIMNKNSTDVKGCSMYVALFPCNECAKLIIQAGIKEVIFMSDKYHDSDEATAARLLFD 148
Query: 61 AAKVHY 66
A V +
Sbjct: 149 MAGVTF 154
>gi|344288275|ref|XP_003415876.1| PREDICTED: deoxycytidylate deaminase-like [Loxodonta africana]
Length = 178
Score = 176 bits (447), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 83/125 (66%), Positives = 98/125 (78%), Gaps = 5/125 (4%)
Query: 83 KRVDDVLEWHEYFMASAFLVAKRSKDPVTRVGAVIVNEDNKIVGTGYNGMPIGCSDDEFP 142
K+ DD LEW EYFMA AFL A+RSKDP ++VGA IVN +NKIVG GYNGMP GCSDD P
Sbjct: 7 KKRDDYLEWPEYFMAVAFLSAQRSKDPNSQVGACIVNGENKIVGIGYNGMPNGCSDDLLP 66
Query: 143 WDKNTHDELD-----MCHAEMNAILNKNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVI 197
W + + LD +CHAE+NAI+NKNSAD K C +Y +LFPCNECAK+IIQ+GIKEVI
Sbjct: 67 WRRTAENRLDTKYPYVCHAELNAIMNKNSADVKGCTMYVALFPCNECAKLIIQAGIKEVI 126
Query: 198 YMCDK 202
+M DK
Sbjct: 127 FMSDK 131
Score = 85.9 bits (211), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 38/66 (57%), Positives = 50/66 (75%)
Query: 1 MNAILNKNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIYMCDKHKQKPATIASKRMFD 60
+NAI+NKNSAD K C +Y +LFPCNECAK+IIQ+GIKEVI+M DK+ A++ +FD
Sbjct: 87 LNAIMNKNSADVKGCTMYVALFPCNECAKLIIQAGIKEVIFMSDKYHDSEEATAARLLFD 146
Query: 61 AAKVHY 66
A V +
Sbjct: 147 MAGVTF 152
>gi|355683018|gb|AER97020.1| dCMP deaminase [Mustela putorius furo]
Length = 177
Score = 176 bits (447), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 83/127 (65%), Positives = 98/127 (77%), Gaps = 5/127 (3%)
Query: 81 PHKRVDDVLEWHEYFMASAFLVAKRSKDPVTRVGAVIVNEDNKIVGTGYNGMPIGCSDDE 140
P K+ DD LEW EYFMA AFL A+RSKDP ++VGA IVN +NKIVG GYNGMP GCSDD
Sbjct: 5 PCKKRDDYLEWPEYFMAVAFLSAQRSKDPNSQVGACIVNAENKIVGIGYNGMPNGCSDDL 64
Query: 141 FPWDKNTHDELD-----MCHAEMNAILNKNSADTKRCKLYTSLFPCNECAKVIIQSGIKE 195
PW + LD +CHAE+NAI+NKNSAD K C +Y +LFPCNECAK+IIQ+GIKE
Sbjct: 65 LPWRRTAESRLDTKYPYVCHAELNAIMNKNSADVKGCTMYVALFPCNECAKLIIQAGIKE 124
Query: 196 VIYMCDK 202
VI++ DK
Sbjct: 125 VIFISDK 131
Score = 86.7 bits (213), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 38/66 (57%), Positives = 51/66 (77%)
Query: 1 MNAILNKNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIYMCDKHKQKPATIASKRMFD 60
+NAI+NKNSAD K C +Y +LFPCNECAK+IIQ+GIKEVI++ DK+ A++R+FD
Sbjct: 87 LNAIMNKNSADVKGCTMYVALFPCNECAKLIIQAGIKEVIFISDKYHDSDEMTAARRLFD 146
Query: 61 AAKVHY 66
A V +
Sbjct: 147 MAGVAF 152
>gi|301756412|ref|XP_002914055.1| PREDICTED: deoxycytidylate deaminase-like [Ailuropoda melanoleuca]
Length = 178
Score = 176 bits (447), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 83/127 (65%), Positives = 99/127 (77%), Gaps = 5/127 (3%)
Query: 81 PHKRVDDVLEWHEYFMASAFLVAKRSKDPVTRVGAVIVNEDNKIVGTGYNGMPIGCSDDE 140
P K+ DD LEW EYFMA AFL A+RSKDP ++VGA IVN +NKIVG GYNGMP GCSDD
Sbjct: 5 PCKKRDDYLEWPEYFMAVAFLSAQRSKDPNSQVGACIVNAENKIVGIGYNGMPNGCSDDL 64
Query: 141 FPWDKNTHDELD-----MCHAEMNAILNKNSADTKRCKLYTSLFPCNECAKVIIQSGIKE 195
PW + +LD +CHAE+NAI+NKNSAD K C +Y +LFPCNECAK+IIQ+GIKE
Sbjct: 65 LPWRRTAESKLDTKYPYVCHAELNAIMNKNSADVKGCTMYVALFPCNECAKLIIQAGIKE 124
Query: 196 VIYMCDK 202
VI++ DK
Sbjct: 125 VIFISDK 131
Score = 86.7 bits (213), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 38/66 (57%), Positives = 51/66 (77%)
Query: 1 MNAILNKNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIYMCDKHKQKPATIASKRMFD 60
+NAI+NKNSAD K C +Y +LFPCNECAK+IIQ+GIKEVI++ DK+ A++R+FD
Sbjct: 87 LNAIMNKNSADVKGCTMYVALFPCNECAKLIIQAGIKEVIFISDKYHDSDEMTAARRLFD 146
Query: 61 AAKVHY 66
A V +
Sbjct: 147 MAGVAF 152
>gi|386780896|ref|NP_001247539.1| deoxycytidylate deaminase [Macaca mulatta]
gi|380810140|gb|AFE76945.1| deoxycytidylate deaminase isoform a [Macaca mulatta]
gi|383412885|gb|AFH29656.1| deoxycytidylate deaminase isoform a [Macaca mulatta]
Length = 189
Score = 176 bits (447), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 82/125 (65%), Positives = 98/125 (78%), Gaps = 5/125 (4%)
Query: 83 KRVDDVLEWHEYFMASAFLVAKRSKDPVTRVGAVIVNEDNKIVGTGYNGMPIGCSDDEFP 142
K+ DD LEW EYFMA AFL A+RSKDP ++VGA IVN +NKIVG GYNGMP GCSDD P
Sbjct: 18 KKRDDYLEWPEYFMAVAFLSAQRSKDPNSQVGACIVNSENKIVGIGYNGMPNGCSDDLLP 77
Query: 143 WDKNTHDELD-----MCHAEMNAILNKNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVI 197
W + ++LD +CHAE+NAI+NKNS D K C +Y +LFPCNECAK+IIQ+GIKEVI
Sbjct: 78 WSRTAENKLDTKYPYVCHAELNAIMNKNSTDVKGCSMYVALFPCNECAKLIIQAGIKEVI 137
Query: 198 YMCDK 202
+M DK
Sbjct: 138 FMSDK 142
Score = 84.3 bits (207), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 37/66 (56%), Positives = 49/66 (74%)
Query: 1 MNAILNKNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIYMCDKHKQKPATIASKRMFD 60
+NAI+NKNS D K C +Y +LFPCNECAK+IIQ+GIKEVI+M DK+ A++ +FD
Sbjct: 98 LNAIMNKNSTDVKGCSMYVALFPCNECAKLIIQAGIKEVIFMSDKYHDSDEATAARLLFD 157
Query: 61 AAKVHY 66
A V +
Sbjct: 158 MAGVTF 163
>gi|410917047|ref|XP_003971998.1| PREDICTED: deoxycytidylate deaminase-like [Takifugu rubripes]
Length = 191
Score = 176 bits (447), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 84/135 (62%), Positives = 102/135 (75%), Gaps = 9/135 (6%)
Query: 73 MNGVQNGSPHKRVDDVLEWHEYFMASAFLVAKRSKDPVTRVGAVIVNEDNKIVGTGYNGM 132
+NGV G + +D LEW EYFMA AFL A+RSKDP ++VGA IVN++ KIVG GYNGM
Sbjct: 12 LNGVSTG----KREDYLEWPEYFMAVAFLSAQRSKDPSSQVGACIVNQEKKIVGIGYNGM 67
Query: 133 PIGCSDDEFPWDKNTHDELD-----MCHAEMNAILNKNSADTKRCKLYTSLFPCNECAKV 187
P GC DD PW ++ D LD +CHAEMNAI+NKNSAD K C +Y +LFPCNECAK+
Sbjct: 68 PNGCDDDLLPWCRSAEDHLDTKYPYVCHAEMNAIMNKNSADVKGCAMYVALFPCNECAKL 127
Query: 188 IIQSGIKEVIYMCDK 202
IIQ+G+KEVIY+ DK
Sbjct: 128 IIQAGLKEVIYLSDK 142
Score = 94.4 bits (233), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 40/66 (60%), Positives = 52/66 (78%)
Query: 1 MNAILNKNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIYMCDKHKQKPATIASKRMFD 60
MNAI+NKNSAD K C +Y +LFPCNECAK+IIQ+G+KEVIY+ DK+ P IAS+++ D
Sbjct: 98 MNAIMNKNSADVKGCAMYVALFPCNECAKLIIQAGLKEVIYLSDKYHNTPGMIASRKLLD 157
Query: 61 AAKVHY 66
A + Y
Sbjct: 158 LAGIQY 163
>gi|397505933|ref|XP_003823493.1| PREDICTED: deoxycytidylate deaminase isoform 2 [Pan paniscus]
Length = 189
Score = 176 bits (447), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 82/125 (65%), Positives = 98/125 (78%), Gaps = 5/125 (4%)
Query: 83 KRVDDVLEWHEYFMASAFLVAKRSKDPVTRVGAVIVNEDNKIVGTGYNGMPIGCSDDEFP 142
K+ DD LEW EYFMA AFL A+RSKDP ++VGA IVN +NKIVG GYNGMP GCSDD P
Sbjct: 18 KKRDDYLEWPEYFMAVAFLSAQRSKDPNSQVGACIVNSENKIVGIGYNGMPNGCSDDVLP 77
Query: 143 WDKNTHDELD-----MCHAEMNAILNKNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVI 197
W + ++LD +CHAE+NAI+NKNS D K C +Y +LFPCNECAK+IIQ+GIKEVI
Sbjct: 78 WRRTAENKLDTKYPYVCHAELNAIMNKNSTDVKGCSMYVALFPCNECAKLIIQAGIKEVI 137
Query: 198 YMCDK 202
+M DK
Sbjct: 138 FMSDK 142
Score = 82.4 bits (202), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 36/66 (54%), Positives = 49/66 (74%)
Query: 1 MNAILNKNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIYMCDKHKQKPATIASKRMFD 60
+NAI+NKNS D K C +Y +LFPCNECAK+IIQ+GIKEVI+M DK+ A++ +F+
Sbjct: 98 LNAIMNKNSTDVKGCSMYVALFPCNECAKLIIQAGIKEVIFMSDKYHDSDEATAARLLFN 157
Query: 61 AAKVHY 66
A V +
Sbjct: 158 MAGVTF 163
>gi|62901894|gb|AAY18898.1| deoxycytidylate deaminase [synthetic construct]
Length = 202
Score = 176 bits (447), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 82/125 (65%), Positives = 98/125 (78%), Gaps = 5/125 (4%)
Query: 83 KRVDDVLEWHEYFMASAFLVAKRSKDPVTRVGAVIVNEDNKIVGTGYNGMPIGCSDDEFP 142
K+ DD LEW EYFMA AFL A+RSKDP ++VGA IVN +NKIVG GYNGMP GCSDD P
Sbjct: 31 KKRDDYLEWPEYFMAVAFLSAQRSKDPNSQVGACIVNSENKIVGIGYNGMPNGCSDDVLP 90
Query: 143 WDKNTHDELD-----MCHAEMNAILNKNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVI 197
W + ++LD +CHAE+NAI+NKNS D K C +Y +LFPCNECAK+IIQ+GIKEVI
Sbjct: 91 WRRTAENKLDTKYPYVCHAELNAIMNKNSTDVKGCSMYVALFPCNECAKLIIQAGIKEVI 150
Query: 198 YMCDK 202
+M DK
Sbjct: 151 FMSDK 155
Score = 82.8 bits (203), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 36/66 (54%), Positives = 49/66 (74%)
Query: 1 MNAILNKNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIYMCDKHKQKPATIASKRMFD 60
+NAI+NKNS D K C +Y +LFPCNECAK+IIQ+GIKEVI+M DK+ A++ +F+
Sbjct: 111 LNAIMNKNSTDVKGCSMYVALFPCNECAKLIIQAGIKEVIFMSDKYHDSDEATAARLLFN 170
Query: 61 AAKVHY 66
A V +
Sbjct: 171 MAGVTF 176
>gi|432089686|gb|ELK23506.1| Deoxycytidylate deaminase [Myotis davidii]
Length = 208
Score = 176 bits (447), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 83/127 (65%), Positives = 99/127 (77%), Gaps = 5/127 (3%)
Query: 81 PHKRVDDVLEWHEYFMASAFLVAKRSKDPVTRVGAVIVNEDNKIVGTGYNGMPIGCSDDE 140
P K+ +D LEW EYFMA AFL A+RSKDP ++VGA IVN +NKIVG GYNGMP GCSDD
Sbjct: 35 PCKKREDYLEWPEYFMAVAFLSAQRSKDPNSQVGACIVNAENKIVGIGYNGMPNGCSDDL 94
Query: 141 FPWDKNTHDELD-----MCHAEMNAILNKNSADTKRCKLYTSLFPCNECAKVIIQSGIKE 195
PW + +LD +CHAE+NAI+NKNSAD K C +Y +LFPCNECAK+IIQ+GIKE
Sbjct: 95 LPWRRTAERKLDTKYPYVCHAELNAIMNKNSADVKGCTIYVALFPCNECAKLIIQAGIKE 154
Query: 196 VIYMCDK 202
VI+M DK
Sbjct: 155 VIFMSDK 161
Score = 87.0 bits (214), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 39/66 (59%), Positives = 51/66 (77%)
Query: 1 MNAILNKNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIYMCDKHKQKPATIASKRMFD 60
+NAI+NKNSAD K C +Y +LFPCNECAK+IIQ+GIKEVI+M DK+ + A++ MFD
Sbjct: 117 LNAIMNKNSADVKGCTIYVALFPCNECAKLIIQAGIKEVIFMSDKYHDSEESTAARLMFD 176
Query: 61 AAKVHY 66
A V +
Sbjct: 177 MAGVAF 182
>gi|62955247|ref|NP_001017639.1| deoxycytidylate deaminase [Danio rerio]
gi|62202187|gb|AAH92809.1| DCMP deaminase [Danio rerio]
Length = 201
Score = 176 bits (446), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 83/139 (59%), Positives = 106/139 (76%), Gaps = 5/139 (3%)
Query: 69 EMDKMNGVQNGSPHKRVDDVLEWHEYFMASAFLVAKRSKDPVTRVGAVIVNEDNKIVGTG 128
E+ ++NG + K+ D LEW EYFMA AFL A+RSKDP ++VGA IVN++NKIVG G
Sbjct: 8 EIVQLNGNHSECLTKKRQDYLEWPEYFMAVAFLSAQRSKDPNSQVGACIVNQENKIVGIG 67
Query: 129 YNGMPIGCSDDEFPWDKNTHDELD-----MCHAEMNAILNKNSADTKRCKLYTSLFPCNE 183
YNGMP GC DD PW ++ ++LD +CHAE+NAI+NKNSAD K C +Y +LFPCNE
Sbjct: 68 YNGMPNGCDDDLLPWSRSADNKLDTKYPYVCHAELNAIMNKNSADVKGCSIYVALFPCNE 127
Query: 184 CAKVIIQSGIKEVIYMCDK 202
CAK+IIQ+GIK+VIY+ DK
Sbjct: 128 CAKLIIQAGIKDVIYLSDK 146
Score = 89.4 bits (220), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 39/66 (59%), Positives = 51/66 (77%)
Query: 1 MNAILNKNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIYMCDKHKQKPATIASKRMFD 60
+NAI+NKNSAD K C +Y +LFPCNECAK+IIQ+GIK+VIY+ DK+ P AS+R+ +
Sbjct: 102 LNAIMNKNSADVKGCSIYVALFPCNECAKLIIQAGIKDVIYLSDKYHDTPEMTASRRLLN 161
Query: 61 AAKVHY 66
A V Y
Sbjct: 162 LAGVTY 167
>gi|417408395|gb|JAA50751.1| Putative deoxycytidylate deaminase, partial [Desmodus rotundus]
Length = 180
Score = 176 bits (446), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 83/127 (65%), Positives = 98/127 (77%), Gaps = 5/127 (3%)
Query: 81 PHKRVDDVLEWHEYFMASAFLVAKRSKDPVTRVGAVIVNEDNKIVGTGYNGMPIGCSDDE 140
P K+ +D LEW EYFMA AFL A+RSKDP ++VGA IVN +NKIVG GYNGMP GCSDD
Sbjct: 7 PCKKREDYLEWPEYFMAVAFLSAQRSKDPNSQVGACIVNAENKIVGIGYNGMPNGCSDDL 66
Query: 141 FPWDKNTHDELD-----MCHAEMNAILNKNSADTKRCKLYTSLFPCNECAKVIIQSGIKE 195
PW + LD +CHAE+NAI+NKNSAD K C +Y +LFPCNECAK+IIQ+GIKE
Sbjct: 67 LPWRRTAERRLDTKYPYVCHAELNAIMNKNSADVKGCTIYVALFPCNECAKLIIQAGIKE 126
Query: 196 VIYMCDK 202
VI+M DK
Sbjct: 127 VIFMSDK 133
Score = 90.5 bits (223), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 41/66 (62%), Positives = 52/66 (78%)
Query: 1 MNAILNKNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIYMCDKHKQKPATIASKRMFD 60
+NAI+NKNSAD K C +Y +LFPCNECAK+IIQ+GIKEVI+M DK+ TIA++ MFD
Sbjct: 89 LNAIMNKNSADVKGCTIYVALFPCNECAKLIIQAGIKEVIFMSDKYHDSEETIAARLMFD 148
Query: 61 AAKVHY 66
A V +
Sbjct: 149 MAGVTF 154
>gi|55623552|ref|XP_517546.1| PREDICTED: deoxycytidylate deaminase isoform 4 [Pan troglodytes]
Length = 189
Score = 176 bits (446), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 82/125 (65%), Positives = 98/125 (78%), Gaps = 5/125 (4%)
Query: 83 KRVDDVLEWHEYFMASAFLVAKRSKDPVTRVGAVIVNEDNKIVGTGYNGMPIGCSDDEFP 142
K+ DD LEW EYFMA AFL A+RSKDP ++VGA IVN +NKIVG GYNGMP GCSDD P
Sbjct: 18 KKRDDYLEWPEYFMAVAFLSAQRSKDPNSQVGACIVNSENKIVGIGYNGMPNGCSDDVLP 77
Query: 143 WDKNTHDELD-----MCHAEMNAILNKNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVI 197
W + ++LD +CHAE+NAI+NKNS D K C +Y +LFPCNECAK+IIQ+GIKEVI
Sbjct: 78 WRRTAENKLDTKYPYVCHAELNAIMNKNSTDVKGCSMYVALFPCNECAKLIIQAGIKEVI 137
Query: 198 YMCDK 202
+M DK
Sbjct: 138 FMSDK 142
Score = 82.4 bits (202), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 36/66 (54%), Positives = 49/66 (74%)
Query: 1 MNAILNKNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIYMCDKHKQKPATIASKRMFD 60
+NAI+NKNS D K C +Y +LFPCNECAK+IIQ+GIKEVI+M DK+ A++ +F+
Sbjct: 98 LNAIMNKNSTDVKGCSMYVALFPCNECAKLIIQAGIKEVIFMSDKYHDSDEATAARLLFN 157
Query: 61 AAKVHY 66
A V +
Sbjct: 158 MAGVTF 163
>gi|321478485|gb|EFX89442.1| hypothetical protein DAPPUDRAFT_190827 [Daphnia pulex]
Length = 217
Score = 176 bits (446), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 80/127 (62%), Positives = 98/127 (77%), Gaps = 5/127 (3%)
Query: 82 HKRVDDVLEWHEYFMASAFLVAKRSKDPVTRVGAVIVNEDNKIVGTGYNGMPIGCSDDEF 141
K+ +D LEW EYFMA AFL A RSKDP T+VGA I + +N+IVG GYNGMPIGCSD+
Sbjct: 48 EKKREDYLEWPEYFMAVAFLAAMRSKDPCTQVGACITDSNNRIVGVGYNGMPIGCSDEIL 107
Query: 142 PWDKNTHDELD-----MCHAEMNAILNKNSADTKRCKLYTSLFPCNECAKVIIQSGIKEV 196
PW KN+ L+ +CHAEMNAI+NKN+AD + C LY +LFPCNECAK+IIQ+GIK+V
Sbjct: 108 PWGKNSSQPLETKYMYVCHAEMNAIMNKNTADLRGCTLYVALFPCNECAKLIIQAGIKQV 167
Query: 197 IYMCDKQ 203
+YM DK
Sbjct: 168 VYMSDKH 174
Score = 97.8 bits (242), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 44/64 (68%), Positives = 53/64 (82%)
Query: 1 MNAILNKNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIYMCDKHKQKPATIASKRMFD 60
MNAI+NKN+AD + C LY +LFPCNECAK+IIQ+GIK+V+YM DKHK KP+T ASK MF
Sbjct: 129 MNAIMNKNTADLRGCTLYVALFPCNECAKLIIQAGIKQVVYMSDKHKNKPSTEASKMMFS 188
Query: 61 AAKV 64
A V
Sbjct: 189 MAGV 192
>gi|61742819|ref|NP_001912.2| deoxycytidylate deaminase isoform b [Homo sapiens]
gi|114597029|ref|XP_001160671.1| PREDICTED: deoxycytidylate deaminase isoform 2 [Pan troglodytes]
gi|397505931|ref|XP_003823492.1| PREDICTED: deoxycytidylate deaminase isoform 1 [Pan paniscus]
gi|397505935|ref|XP_003823494.1| PREDICTED: deoxycytidylate deaminase isoform 3 [Pan paniscus]
gi|410038986|ref|XP_003950530.1| PREDICTED: deoxycytidylate deaminase [Pan troglodytes]
gi|426346086|ref|XP_004040718.1| PREDICTED: deoxycytidylate deaminase-like isoform 2 [Gorilla
gorilla gorilla]
gi|426346088|ref|XP_004040719.1| PREDICTED: deoxycytidylate deaminase-like isoform 3 [Gorilla
gorilla gorilla]
gi|426346090|ref|XP_004040720.1| PREDICTED: deoxycytidylate deaminase-like isoform 4 [Gorilla
gorilla gorilla]
gi|426346092|ref|XP_004040721.1| PREDICTED: deoxycytidylate deaminase-like isoform 5 [Gorilla
gorilla gorilla]
gi|23503055|sp|P32321.2|DCTD_HUMAN RecName: Full=Deoxycytidylate deaminase; AltName: Full=dCMP
deaminase
gi|886280|gb|AAC37579.1| deoxycytidylate deaminase [Homo sapiens]
gi|119625105|gb|EAX04700.1| dCMP deaminase, isoform CRA_c [Homo sapiens]
gi|119625106|gb|EAX04701.1| dCMP deaminase, isoform CRA_c [Homo sapiens]
gi|189053781|dbj|BAG36033.1| unnamed protein product [Homo sapiens]
Length = 178
Score = 176 bits (446), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 82/125 (65%), Positives = 98/125 (78%), Gaps = 5/125 (4%)
Query: 83 KRVDDVLEWHEYFMASAFLVAKRSKDPVTRVGAVIVNEDNKIVGTGYNGMPIGCSDDEFP 142
K+ DD LEW EYFMA AFL A+RSKDP ++VGA IVN +NKIVG GYNGMP GCSDD P
Sbjct: 7 KKRDDYLEWPEYFMAVAFLSAQRSKDPNSQVGACIVNSENKIVGIGYNGMPNGCSDDVLP 66
Query: 143 WDKNTHDELD-----MCHAEMNAILNKNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVI 197
W + ++LD +CHAE+NAI+NKNS D K C +Y +LFPCNECAK+IIQ+GIKEVI
Sbjct: 67 WRRTAENKLDTKYPYVCHAELNAIMNKNSTDVKGCSMYVALFPCNECAKLIIQAGIKEVI 126
Query: 198 YMCDK 202
+M DK
Sbjct: 127 FMSDK 131
Score = 82.4 bits (202), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 36/66 (54%), Positives = 49/66 (74%)
Query: 1 MNAILNKNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIYMCDKHKQKPATIASKRMFD 60
+NAI+NKNS D K C +Y +LFPCNECAK+IIQ+GIKEVI+M DK+ A++ +F+
Sbjct: 87 LNAIMNKNSTDVKGCSMYVALFPCNECAKLIIQAGIKEVIFMSDKYHDSDEATAARLLFN 146
Query: 61 AAKVHY 66
A V +
Sbjct: 147 MAGVTF 152
>gi|410299942|gb|JAA28571.1| dCMP deaminase [Pan troglodytes]
Length = 205
Score = 176 bits (446), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 82/125 (65%), Positives = 98/125 (78%), Gaps = 5/125 (4%)
Query: 83 KRVDDVLEWHEYFMASAFLVAKRSKDPVTRVGAVIVNEDNKIVGTGYNGMPIGCSDDEFP 142
K+ DD LEW EYFMA AFL A+RSKDP ++VGA IVN +NKIVG GYNGMP GCSDD P
Sbjct: 18 KKRDDYLEWPEYFMAVAFLSAQRSKDPNSQVGACIVNSENKIVGIGYNGMPNGCSDDVLP 77
Query: 143 WDKNTHDELD-----MCHAEMNAILNKNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVI 197
W + ++LD +CHAE+NAI+NKNS D K C +Y +LFPCNECAK+IIQ+GIKEVI
Sbjct: 78 WRRTAENKLDTKYPYVCHAELNAIMNKNSTDVKGCSMYVALFPCNECAKLIIQAGIKEVI 137
Query: 198 YMCDK 202
+M DK
Sbjct: 138 FMSDK 142
Score = 82.8 bits (203), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 36/66 (54%), Positives = 49/66 (74%)
Query: 1 MNAILNKNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIYMCDKHKQKPATIASKRMFD 60
+NAI+NKNS D K C +Y +LFPCNECAK+IIQ+GIKEVI+M DK+ A++ +F+
Sbjct: 98 LNAIMNKNSTDVKGCSMYVALFPCNECAKLIIQAGIKEVIFMSDKYHDSDEATAARLLFN 157
Query: 61 AAKVHY 66
A V +
Sbjct: 158 MAGVTF 163
>gi|61742821|ref|NP_001012750.1| deoxycytidylate deaminase isoform a [Homo sapiens]
gi|426346084|ref|XP_004040717.1| PREDICTED: deoxycytidylate deaminase-like isoform 1 [Gorilla
gorilla gorilla]
gi|66840174|gb|AAH88357.2| DCMP deaminase [Homo sapiens]
gi|119625102|gb|EAX04697.1| dCMP deaminase, isoform CRA_a [Homo sapiens]
gi|119625103|gb|EAX04698.1| dCMP deaminase, isoform CRA_a [Homo sapiens]
gi|410224244|gb|JAA09341.1| dCMP deaminase [Pan troglodytes]
gi|410262312|gb|JAA19122.1| dCMP deaminase [Pan troglodytes]
gi|410351607|gb|JAA42407.1| dCMP deaminase [Pan troglodytes]
Length = 189
Score = 176 bits (446), Expect = 6e-42, Method: Compositional matrix adjust.
Identities = 82/125 (65%), Positives = 98/125 (78%), Gaps = 5/125 (4%)
Query: 83 KRVDDVLEWHEYFMASAFLVAKRSKDPVTRVGAVIVNEDNKIVGTGYNGMPIGCSDDEFP 142
K+ DD LEW EYFMA AFL A+RSKDP ++VGA IVN +NKIVG GYNGMP GCSDD P
Sbjct: 18 KKRDDYLEWPEYFMAVAFLSAQRSKDPNSQVGACIVNSENKIVGIGYNGMPNGCSDDVLP 77
Query: 143 WDKNTHDELD-----MCHAEMNAILNKNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVI 197
W + ++LD +CHAE+NAI+NKNS D K C +Y +LFPCNECAK+IIQ+GIKEVI
Sbjct: 78 WRRTAENKLDTKYPYVCHAELNAIMNKNSTDVKGCSMYVALFPCNECAKLIIQAGIKEVI 137
Query: 198 YMCDK 202
+M DK
Sbjct: 138 FMSDK 142
Score = 82.4 bits (202), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 36/66 (54%), Positives = 49/66 (74%)
Query: 1 MNAILNKNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIYMCDKHKQKPATIASKRMFD 60
+NAI+NKNS D K C +Y +LFPCNECAK+IIQ+GIKEVI+M DK+ A++ +F+
Sbjct: 98 LNAIMNKNSTDVKGCSMYVALFPCNECAKLIIQAGIKEVIFMSDKYHDSDEATAARLLFN 157
Query: 61 AAKVHY 66
A V +
Sbjct: 158 MAGVTF 163
>gi|431902316|gb|ELK08817.1| Deoxycytidylate deaminase [Pteropus alecto]
Length = 239
Score = 176 bits (445), Expect = 6e-42, Method: Compositional matrix adjust.
Identities = 82/127 (64%), Positives = 98/127 (77%), Gaps = 5/127 (3%)
Query: 81 PHKRVDDVLEWHEYFMASAFLVAKRSKDPVTRVGAVIVNEDNKIVGTGYNGMPIGCSDDE 140
P K+ +D LEW EYFMA AFL A+RSKDP ++VGA IVN +NKIVG GYNGMP GCSDD
Sbjct: 66 PCKKREDYLEWPEYFMAVAFLSAQRSKDPNSQVGACIVNAENKIVGIGYNGMPNGCSDDH 125
Query: 141 FPWDKNTHDELD-----MCHAEMNAILNKNSADTKRCKLYTSLFPCNECAKVIIQSGIKE 195
PW + +LD +CHAE+NAI+NKNS D K C +Y +LFPCNECAK+IIQ+GIKE
Sbjct: 126 LPWRRTAERKLDTKYPYVCHAELNAIMNKNSTDVKGCTIYVALFPCNECAKLIIQAGIKE 185
Query: 196 VIYMCDK 202
VI+M DK
Sbjct: 186 VIFMSDK 192
Score = 84.7 bits (208), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 37/66 (56%), Positives = 50/66 (75%)
Query: 1 MNAILNKNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIYMCDKHKQKPATIASKRMFD 60
+NAI+NKNS D K C +Y +LFPCNECAK+IIQ+GIKEVI+M DK+ A++ MF+
Sbjct: 148 LNAIMNKNSTDVKGCTIYVALFPCNECAKLIIQAGIKEVIFMSDKYHDSEEATAARLMFN 207
Query: 61 AAKVHY 66
A+V +
Sbjct: 208 MARVDF 213
>gi|332244695|ref|XP_003271509.1| PREDICTED: deoxycytidylate deaminase isoform 4 [Nomascus
leucogenys]
gi|441619795|ref|XP_004088616.1| PREDICTED: deoxycytidylate deaminase [Nomascus leucogenys]
gi|441619798|ref|XP_004088617.1| PREDICTED: deoxycytidylate deaminase [Nomascus leucogenys]
gi|441619801|ref|XP_004088618.1| PREDICTED: deoxycytidylate deaminase [Nomascus leucogenys]
gi|441619804|ref|XP_004088619.1| PREDICTED: deoxycytidylate deaminase [Nomascus leucogenys]
Length = 178
Score = 176 bits (445), Expect = 7e-42, Method: Compositional matrix adjust.
Identities = 82/125 (65%), Positives = 98/125 (78%), Gaps = 5/125 (4%)
Query: 83 KRVDDVLEWHEYFMASAFLVAKRSKDPVTRVGAVIVNEDNKIVGTGYNGMPIGCSDDEFP 142
K+ DD LEW EYFMA AFL A+RSKDP ++VGA IVN +NKIVG GYNGMP GCSDD P
Sbjct: 7 KKRDDYLEWPEYFMAVAFLSAQRSKDPNSQVGACIVNSENKIVGIGYNGMPNGCSDDLLP 66
Query: 143 WDKNTHDELD-----MCHAEMNAILNKNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVI 197
W + ++LD +CHAE+NAI+NKNS D K C +Y +LFPCNECAK+IIQ+GIKEVI
Sbjct: 67 WRRTAKNKLDTKYPYVCHAELNAIMNKNSTDVKGCSMYVALFPCNECAKLIIQAGIKEVI 126
Query: 198 YMCDK 202
+M DK
Sbjct: 127 FMSDK 131
Score = 84.3 bits (207), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 37/66 (56%), Positives = 49/66 (74%)
Query: 1 MNAILNKNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIYMCDKHKQKPATIASKRMFD 60
+NAI+NKNS D K C +Y +LFPCNECAK+IIQ+GIKEVI+M DK+ A++ +FD
Sbjct: 87 LNAIMNKNSTDVKGCSMYVALFPCNECAKLIIQAGIKEVIFMSDKYHDSDEATAARLLFD 146
Query: 61 AAKVHY 66
A V +
Sbjct: 147 MAGVTF 152
>gi|410955979|ref|XP_003984623.1| PREDICTED: deoxycytidylate deaminase [Felis catus]
Length = 178
Score = 176 bits (445), Expect = 7e-42, Method: Compositional matrix adjust.
Identities = 82/127 (64%), Positives = 99/127 (77%), Gaps = 5/127 (3%)
Query: 81 PHKRVDDVLEWHEYFMASAFLVAKRSKDPVTRVGAVIVNEDNKIVGTGYNGMPIGCSDDE 140
P ++ DD LEW EYFMA AFL A+RSKDP ++VGA IVN +NKIVG GYNGMP GCSDD
Sbjct: 5 PCRKRDDYLEWPEYFMAVAFLSAQRSKDPNSQVGACIVNAENKIVGIGYNGMPNGCSDDV 64
Query: 141 FPWDKNTHDELD-----MCHAEMNAILNKNSADTKRCKLYTSLFPCNECAKVIIQSGIKE 195
PW + +LD +CHAE+NAI+NKNSAD K C +Y +LFPCNECAK+IIQ+GIKE
Sbjct: 65 LPWRRTAERKLDTKYPYVCHAELNAIMNKNSADVKGCTMYVALFPCNECAKLIIQAGIKE 124
Query: 196 VIYMCDK 202
VI++ DK
Sbjct: 125 VIFISDK 131
Score = 85.9 bits (211), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 38/66 (57%), Positives = 51/66 (77%)
Query: 1 MNAILNKNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIYMCDKHKQKPATIASKRMFD 60
+NAI+NKNSAD K C +Y +LFPCNECAK+IIQ+GIKEVI++ DK+ T A++ +FD
Sbjct: 87 LNAIMNKNSADVKGCTMYVALFPCNECAKLIIQAGIKEVIFISDKYHDSDETTAARLLFD 146
Query: 61 AAKVHY 66
A V +
Sbjct: 147 MAGVAF 152
>gi|332244689|ref|XP_003271506.1| PREDICTED: deoxycytidylate deaminase isoform 1 [Nomascus
leucogenys]
gi|332244697|ref|XP_003271510.1| PREDICTED: deoxycytidylate deaminase isoform 5 [Nomascus
leucogenys]
Length = 189
Score = 175 bits (444), Expect = 8e-42, Method: Compositional matrix adjust.
Identities = 82/125 (65%), Positives = 98/125 (78%), Gaps = 5/125 (4%)
Query: 83 KRVDDVLEWHEYFMASAFLVAKRSKDPVTRVGAVIVNEDNKIVGTGYNGMPIGCSDDEFP 142
K+ DD LEW EYFMA AFL A+RSKDP ++VGA IVN +NKIVG GYNGMP GCSDD P
Sbjct: 18 KKRDDYLEWPEYFMAVAFLSAQRSKDPNSQVGACIVNSENKIVGIGYNGMPNGCSDDLLP 77
Query: 143 WDKNTHDELD-----MCHAEMNAILNKNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVI 197
W + ++LD +CHAE+NAI+NKNS D K C +Y +LFPCNECAK+IIQ+GIKEVI
Sbjct: 78 WRRTAKNKLDTKYPYVCHAELNAIMNKNSTDVKGCSMYVALFPCNECAKLIIQAGIKEVI 137
Query: 198 YMCDK 202
+M DK
Sbjct: 138 FMSDK 142
Score = 84.3 bits (207), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 37/66 (56%), Positives = 49/66 (74%)
Query: 1 MNAILNKNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIYMCDKHKQKPATIASKRMFD 60
+NAI+NKNS D K C +Y +LFPCNECAK+IIQ+GIKEVI+M DK+ A++ +FD
Sbjct: 98 LNAIMNKNSTDVKGCSMYVALFPCNECAKLIIQAGIKEVIFMSDKYHDSDEATAARLLFD 157
Query: 61 AAKVHY 66
A V +
Sbjct: 158 MAGVTF 163
>gi|148232294|ref|NP_001084625.1| dCMP deaminase [Xenopus laevis]
gi|46249834|gb|AAH68731.1| MGC81193 protein [Xenopus laevis]
Length = 190
Score = 175 bits (444), Expect = 9e-42, Method: Compositional matrix adjust.
Identities = 81/134 (60%), Positives = 99/134 (73%), Gaps = 5/134 (3%)
Query: 74 NGVQNGSPHKRVDDVLEWHEYFMASAFLVAKRSKDPVTRVGAVIVNEDNKIVGTGYNGMP 133
NG K+ +D LEW EYFMA AFL A+RSKDP ++VGA IVN +NKIVG GYNGMP
Sbjct: 9 NGAAASCLSKKREDYLEWCEYFMAVAFLAAQRSKDPSSQVGACIVNSENKIVGIGYNGMP 68
Query: 134 IGCSDDEFPWDKNTHDELD-----MCHAEMNAILNKNSADTKRCKLYTSLFPCNECAKVI 188
GC DD PW + D LD +CHAE+NAI+NKN+AD K C +Y +LFPCNECAK++
Sbjct: 69 NGCHDDVLPWARTAEDRLDTKYPYVCHAELNAIMNKNTADVKGCTMYVALFPCNECAKLV 128
Query: 189 IQSGIKEVIYMCDK 202
IQ+GIKEV++M DK
Sbjct: 129 IQAGIKEVVFMSDK 142
Score = 89.4 bits (220), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 37/66 (56%), Positives = 51/66 (77%)
Query: 1 MNAILNKNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIYMCDKHKQKPATIASKRMFD 60
+NAI+NKN+AD K C +Y +LFPCNECAK++IQ+GIKEV++M DK+ P A++ MFD
Sbjct: 98 LNAIMNKNTADVKGCTMYVALFPCNECAKLVIQAGIKEVVFMSDKYHDNPEMTAARHMFD 157
Query: 61 AAKVHY 66
A + Y
Sbjct: 158 LAGIKY 163
>gi|149742700|ref|XP_001492380.1| PREDICTED: deoxycytidylate deaminase [Equus caballus]
Length = 178
Score = 175 bits (444), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 81/125 (64%), Positives = 99/125 (79%), Gaps = 5/125 (4%)
Query: 83 KRVDDVLEWHEYFMASAFLVAKRSKDPVTRVGAVIVNEDNKIVGTGYNGMPIGCSDDEFP 142
++ DD L+W EYFMA AFL A+RSKDP ++VGA IVN +NKIVG GYNGMP GCSDD P
Sbjct: 7 RKRDDYLQWPEYFMAVAFLSAQRSKDPNSQVGACIVNAENKIVGIGYNGMPNGCSDDLLP 66
Query: 143 WDKNTHDELD-----MCHAEMNAILNKNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVI 197
W + ++LD +CHAE+NAI+NKNSAD K C +Y +LFPCNECAK+IIQ+GIKEVI
Sbjct: 67 WRRTAENKLDTKYPYVCHAELNAIMNKNSADVKGCTMYVALFPCNECAKLIIQAGIKEVI 126
Query: 198 YMCDK 202
+M DK
Sbjct: 127 FMSDK 131
Score = 85.9 bits (211), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 38/66 (57%), Positives = 50/66 (75%)
Query: 1 MNAILNKNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIYMCDKHKQKPATIASKRMFD 60
+NAI+NKNSAD K C +Y +LFPCNECAK+IIQ+GIKEVI+M DK+ A++ +FD
Sbjct: 87 LNAIMNKNSADVKGCTMYVALFPCNECAKLIIQAGIKEVIFMSDKYHDSDEATAARLLFD 146
Query: 61 AAKVHY 66
A V +
Sbjct: 147 MAGVTF 152
>gi|291385964|ref|XP_002709531.1| PREDICTED: dCMP deaminase [Oryctolagus cuniculus]
Length = 178
Score = 175 bits (444), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 81/125 (64%), Positives = 99/125 (79%), Gaps = 5/125 (4%)
Query: 83 KRVDDVLEWHEYFMASAFLVAKRSKDPVTRVGAVIVNEDNKIVGTGYNGMPIGCSDDEFP 142
++ +D LEW EYFMA AFL A+RSKDP ++VGA IVN +NKIVG GYNGMP GCSDD P
Sbjct: 7 RKREDYLEWPEYFMAVAFLSAQRSKDPNSQVGACIVNAENKIVGIGYNGMPNGCSDDLLP 66
Query: 143 WDKNTHDELD-----MCHAEMNAILNKNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVI 197
W + ++LD +CHAE+NAI+NKNSAD K C +Y +LFPCNECAK+IIQ+GIKEVI
Sbjct: 67 WRRTAENKLDTKYPYVCHAELNAIMNKNSADVKGCSMYVALFPCNECAKLIIQAGIKEVI 126
Query: 198 YMCDK 202
+M DK
Sbjct: 127 FMSDK 131
Score = 89.0 bits (219), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 40/66 (60%), Positives = 51/66 (77%)
Query: 1 MNAILNKNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIYMCDKHKQKPATIASKRMFD 60
+NAI+NKNSAD K C +Y +LFPCNECAK+IIQ+GIKEVI+M DK+ T A++ MFD
Sbjct: 87 LNAIMNKNSADVKGCSMYVALFPCNECAKLIIQAGIKEVIFMSDKYHDSDETTAARLMFD 146
Query: 61 AAKVHY 66
A V +
Sbjct: 147 MAGVAF 152
>gi|296195104|ref|XP_002745234.1| PREDICTED: deoxycytidylate deaminase-like [Callithrix jacchus]
Length = 178
Score = 175 bits (443), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 81/125 (64%), Positives = 98/125 (78%), Gaps = 5/125 (4%)
Query: 83 KRVDDVLEWHEYFMASAFLVAKRSKDPVTRVGAVIVNEDNKIVGTGYNGMPIGCSDDEFP 142
K+ DD LEW EYFMA AFL A+RSKDP ++VGA IVN +NKIVG GYNGMP GCSDD P
Sbjct: 7 KKRDDYLEWPEYFMAVAFLSAQRSKDPNSQVGACIVNSENKIVGIGYNGMPNGCSDDLLP 66
Query: 143 WDKNTHDELD-----MCHAEMNAILNKNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVI 197
W + ++LD +CHAE+NAI+NKNS D K C +Y +LFPCNECAK+IIQ+GI+EVI
Sbjct: 67 WRRTAENKLDTKYPYVCHAELNAIMNKNSTDVKGCTMYVALFPCNECAKLIIQAGIREVI 126
Query: 198 YMCDK 202
+M DK
Sbjct: 127 FMSDK 131
Score = 84.7 bits (208), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 37/66 (56%), Positives = 49/66 (74%)
Query: 1 MNAILNKNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIYMCDKHKQKPATIASKRMFD 60
+NAI+NKNS D K C +Y +LFPCNECAK+IIQ+GI+EVI+M DK+ A++ MFD
Sbjct: 87 LNAIMNKNSTDVKGCTMYVALFPCNECAKLIIQAGIREVIFMSDKYHDSDEATAARLMFD 146
Query: 61 AAKVHY 66
A V +
Sbjct: 147 MAGVAF 152
>gi|449279597|gb|EMC87160.1| Deoxycytidylate deaminase [Columba livia]
Length = 183
Score = 175 bits (443), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 82/125 (65%), Positives = 97/125 (77%), Gaps = 5/125 (4%)
Query: 83 KRVDDVLEWHEYFMASAFLVAKRSKDPVTRVGAVIVNEDNKIVGTGYNGMPIGCSDDEFP 142
K+ +D LEW EYFMA AFL A+RSKDP ++VGA IVN +NKIVG GYNGMP GCSDD P
Sbjct: 12 KKREDYLEWPEYFMAVAFLSAQRSKDPSSQVGACIVNSENKIVGIGYNGMPNGCSDDVLP 71
Query: 143 WDKNTHDELD-----MCHAEMNAILNKNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVI 197
W + LD +CHAE+NAI+NKNSAD K C +Y +LFPCNECAK+IIQ+GIKEVI
Sbjct: 72 WARTAAHRLDTKYPYVCHAELNAIMNKNSADVKGCSMYVALFPCNECAKLIIQAGIKEVI 131
Query: 198 YMCDK 202
+M DK
Sbjct: 132 FMSDK 136
Score = 89.7 bits (221), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 42/76 (55%), Positives = 54/76 (71%)
Query: 1 MNAILNKNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIYMCDKHKQKPATIASKRMFD 60
+NAI+NKNSAD K C +Y +LFPCNECAK+IIQ+GIKEVI+M DK+ A++RMFD
Sbjct: 92 LNAIMNKNSADVKGCSMYVALFPCNECAKLIIQAGIKEVIFMSDKYHDTTEMTAARRMFD 151
Query: 61 AAKVHYWSEMDKMNGV 76
A + Y K N +
Sbjct: 152 LAGIIYREFKPKCNKI 167
>gi|209734934|gb|ACI68336.1| Deoxycytidylate deaminase [Salmo salar]
Length = 196
Score = 175 bits (443), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 83/142 (58%), Positives = 106/142 (74%), Gaps = 7/142 (4%)
Query: 68 SEMDKMNGV--QNGSPHKRVDDVLEWHEYFMASAFLVAKRSKDPVTRVGAVIVNEDNKIV 125
+E ++NG + + K+ +D LEW +YFMA AFL A+RSKDP ++VGA IVN +NKIV
Sbjct: 7 NEASQLNGTPASDSAQTKKREDYLEWPDYFMAVAFLSAQRSKDPSSQVGACIVNRENKIV 66
Query: 126 GTGYNGMPIGCSDDEFPWDKNTHDELD-----MCHAEMNAILNKNSADTKRCKLYTSLFP 180
G GYNGMP GC DD PW + +D LD +CHAE+NAI+NKNSAD K C +Y +LFP
Sbjct: 67 GIGYNGMPNGCDDDLLPWSCSANDRLDTKYPYVCHAELNAIMNKNSADVKGCSMYVALFP 126
Query: 181 CNECAKVIIQSGIKEVIYMCDK 202
CNECAK+IIQ+GIK+VIY+ DK
Sbjct: 127 CNECAKLIIQAGIKDVIYLSDK 148
Score = 89.0 bits (219), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 38/66 (57%), Positives = 51/66 (77%)
Query: 1 MNAILNKNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIYMCDKHKQKPATIASKRMFD 60
+NAI+NKNSAD K C +Y +LFPCNECAK+IIQ+GIK+VIY+ DK+ P AS+R+ +
Sbjct: 104 LNAIMNKNSADVKGCSMYVALFPCNECAKLIIQAGIKDVIYLSDKYHDIPEMTASRRLLN 163
Query: 61 AAKVHY 66
A + Y
Sbjct: 164 LAGIEY 169
>gi|332025338|gb|EGI65506.1| Deoxycytidylate deaminase [Acromyrmex echinatior]
Length = 182
Score = 174 bits (442), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 80/119 (67%), Positives = 94/119 (78%), Gaps = 5/119 (4%)
Query: 89 LEWHEYFMASAFLVAKRSKDPVTRVGAVIVNEDNKIVGTGYNGMPIGCSDDEFPWDKNTH 148
++W EYFMA AFL AKRSKDP T+VGA IVN D +IVG GYNGMP GCSDDEFPW + H
Sbjct: 9 IDWDEYFMAIAFLSAKRSKDPCTQVGACIVNNDKRIVGIGYNGMPTGCSDDEFPWKRGLH 68
Query: 149 DELD-----MCHAEMNAILNKNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIYMCDK 202
L+ +CHAE+NA+LNKNS++ K C +Y +LFPCN+CAKVIIQSGIK VIYM DK
Sbjct: 69 TSLESKYLYVCHAEVNAVLNKNSSNVKDCTIYVALFPCNQCAKVIIQSGIKTVIYMSDK 127
Score = 94.4 bits (233), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 44/66 (66%), Positives = 53/66 (80%)
Query: 1 MNAILNKNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIYMCDKHKQKPATIASKRMFD 60
+NA+LNKNS++ K C +Y +LFPCN+CAKVIIQSGIK VIYM DK+ K TIA+KRMFD
Sbjct: 83 VNAVLNKNSSNVKDCTIYVALFPCNQCAKVIIQSGIKTVIYMSDKYAHKVETIAAKRMFD 142
Query: 61 AAKVHY 66
A V Y
Sbjct: 143 ATGVIY 148
>gi|340369827|ref|XP_003383449.1| PREDICTED: deoxycytidylate deaminase-like [Amphimedon
queenslandica]
Length = 194
Score = 174 bits (442), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 82/134 (61%), Positives = 100/134 (74%), Gaps = 5/134 (3%)
Query: 74 NGVQNGSPHKRVDDVLEWHEYFMASAFLVAKRSKDPVTRVGAVIVNEDNKIVGTGYNGMP 133
NG+ + S K+ D L W EYFMA AFL A+RSKDP ++VGA IV+ D KIVG GYNGMP
Sbjct: 13 NGISHASSVKKRLDYLNWDEYFMAVAFLSAQRSKDPHSQVGACIVSPDRKIVGIGYNGMP 72
Query: 134 IGCSDDEFPWDKNTHDELD-----MCHAEMNAILNKNSADTKRCKLYTSLFPCNECAKVI 188
GCSDDE PW++ + LD +CHAE+NAILNKNSAD C +Y +LFPCNECAK+I
Sbjct: 73 NGCSDDELPWNREAENRLDTKYPYVCHAELNAILNKNSADVTGCTIYVALFPCNECAKLI 132
Query: 189 IQSGIKEVIYMCDK 202
IQSGI E++Y+ DK
Sbjct: 133 IQSGITEILYVSDK 146
Score = 87.4 bits (215), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 39/66 (59%), Positives = 50/66 (75%)
Query: 1 MNAILNKNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIYMCDKHKQKPATIASKRMFD 60
+NAILNKNSAD C +Y +LFPCNECAK+IIQSGI E++Y+ DK+ IAS+++ D
Sbjct: 102 LNAILNKNSADVTGCTIYVALFPCNECAKLIIQSGITEILYVSDKYHDTDHMIASRKLLD 161
Query: 61 AAKVHY 66
AKV Y
Sbjct: 162 MAKVKY 167
>gi|291237544|ref|XP_002738694.1| PREDICTED: predicted protein-like [Saccoglossus kowalevskii]
Length = 203
Score = 174 bits (441), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 82/125 (65%), Positives = 98/125 (78%), Gaps = 6/125 (4%)
Query: 83 KRVDDVLEWHEYFMASAFLVAKRSKDPVTRVGAVIVNEDNKIVGTGYNGMPIGCSDDEFP 142
KRVD L W +YFMA AFL A+RSKDP ++VGA IVNE+ KIVG GYNGMPIGCSDD P
Sbjct: 41 KRVD-YLSWEDYFMAVAFLSAQRSKDPSSQVGACIVNEEKKIVGIGYNGMPIGCSDDVLP 99
Query: 143 WDKNTHDELD-----MCHAEMNAILNKNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVI 197
W + DELD +CHAE+NAILNKNS+D K C +Y +LFPCNECAK++IQS IKEV+
Sbjct: 100 WRRKADDELDTKYPYVCHAELNAILNKNSSDVKGCTMYVALFPCNECAKLVIQSKIKEVV 159
Query: 198 YMCDK 202
Y+ +K
Sbjct: 160 YVSNK 164
Score = 85.1 bits (209), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 38/70 (54%), Positives = 51/70 (72%)
Query: 1 MNAILNKNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIYMCDKHKQKPATIASKRMFD 60
+NAILNKNS+D K C +Y +LFPCNECAK++IQS IKEV+Y+ +K+ AS++M D
Sbjct: 120 LNAILNKNSSDVKGCTMYVALFPCNECAKLVIQSKIKEVVYVSNKYHDTAGVTASRKMLD 179
Query: 61 AAKVHYWSEM 70
A V Y E+
Sbjct: 180 LAGVKYRYEV 189
>gi|181537|gb|AAA35755.1| deoxycytidylate deaminase [Homo sapiens]
Length = 178
Score = 174 bits (440), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 81/125 (64%), Positives = 97/125 (77%), Gaps = 5/125 (4%)
Query: 83 KRVDDVLEWHEYFMASAFLVAKRSKDPVTRVGAVIVNEDNKIVGTGYNGMPIGCSDDEFP 142
K+ DD LEW EYFMA AFL A+RSKDP ++VGA IVN +NKIVG GYNGMP GCSDD P
Sbjct: 7 KKRDDYLEWPEYFMAVAFLSAQRSKDPNSQVGACIVNSENKIVGIGYNGMPNGCSDDVLP 66
Query: 143 WDKNTHDELD-----MCHAEMNAILNKNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVI 197
W + ++LD +CHAE+NAI+NKNS D K C +Y +LFPCNECAK+IIQ+GIKEVI
Sbjct: 67 WRRTAENKLDTKYPYVCHAELNAIMNKNSTDVKGCSMYVALFPCNECAKLIIQAGIKEVI 126
Query: 198 YMCDK 202
+ DK
Sbjct: 127 FTSDK 131
Score = 80.1 bits (196), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 35/66 (53%), Positives = 48/66 (72%)
Query: 1 MNAILNKNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIYMCDKHKQKPATIASKRMFD 60
+NAI+NKNS D K C +Y +LFPCNECAK+IIQ+GIKEVI+ DK+ A++ +F+
Sbjct: 87 LNAIMNKNSTDVKGCSMYVALFPCNECAKLIIQAGIKEVIFTSDKYHDSDEATAARLLFN 146
Query: 61 AAKVHY 66
A V +
Sbjct: 147 MAGVTF 152
>gi|12654885|gb|AAH01286.1| DCMP deaminase [Homo sapiens]
Length = 178
Score = 174 bits (440), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 81/125 (64%), Positives = 97/125 (77%), Gaps = 5/125 (4%)
Query: 83 KRVDDVLEWHEYFMASAFLVAKRSKDPVTRVGAVIVNEDNKIVGTGYNGMPIGCSDDEFP 142
K+ DD LEW EYFMA AFL A+RSKDP ++VGA IVN +NKIVG GYNGMP GCSDD P
Sbjct: 7 KKRDDYLEWPEYFMAVAFLSAQRSKDPNSQVGACIVNSENKIVGIGYNGMPNGCSDDVLP 66
Query: 143 WDKNTHDELD-----MCHAEMNAILNKNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVI 197
W + ++LD +CHAE+NAI+NKN D K C +Y +LFPCNECAK+IIQ+GIKEVI
Sbjct: 67 WRRTAENKLDTKYPYVCHAELNAIMNKNLTDVKGCSMYVALFPCNECAKLIIQAGIKEVI 126
Query: 198 YMCDK 202
+M DK
Sbjct: 127 FMSDK 131
Score = 80.1 bits (196), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 35/66 (53%), Positives = 48/66 (72%)
Query: 1 MNAILNKNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIYMCDKHKQKPATIASKRMFD 60
+NAI+NKN D K C +Y +LFPCNECAK+IIQ+GIKEVI+M DK+ A++ +F+
Sbjct: 87 LNAIMNKNLTDVKGCSMYVALFPCNECAKLIIQAGIKEVIFMSDKYHDSDEATAARLLFN 146
Query: 61 AAKVHY 66
A V +
Sbjct: 147 MAGVTF 152
>gi|224036452|pdb|2W4L|A Chain A, Human Dcmp Deaminase
gi|224036453|pdb|2W4L|B Chain B, Human Dcmp Deaminase
gi|224036454|pdb|2W4L|C Chain C, Human Dcmp Deaminase
gi|224036455|pdb|2W4L|D Chain D, Human Dcmp Deaminase
gi|224036456|pdb|2W4L|E Chain E, Human Dcmp Deaminase
gi|224036457|pdb|2W4L|F Chain F, Human Dcmp Deaminase
Length = 178
Score = 173 bits (439), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 81/125 (64%), Positives = 97/125 (77%), Gaps = 5/125 (4%)
Query: 83 KRVDDVLEWHEYFMASAFLVAKRSKDPVTRVGAVIVNEDNKIVGTGYNGMPIGCSDDEFP 142
K+ DD LEW EYFMA AFL A+RSKDP ++VGA IVN +NKIVG GYNGMP GCSDD P
Sbjct: 4 KKRDDYLEWPEYFMAVAFLSAQRSKDPNSQVGACIVNSENKIVGIGYNGMPNGCSDDVLP 63
Query: 143 WDKNTHDELD-----MCHAEMNAILNKNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVI 197
W + ++LD +CHAE+NAI+NKN D K C +Y +LFPCNECAK+IIQ+GIKEVI
Sbjct: 64 WRRTAENKLDTKYPYVCHAELNAIMNKNLTDVKGCSMYVALFPCNECAKLIIQAGIKEVI 123
Query: 198 YMCDK 202
+M DK
Sbjct: 124 FMSDK 128
Score = 80.1 bits (196), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 35/66 (53%), Positives = 48/66 (72%)
Query: 1 MNAILNKNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIYMCDKHKQKPATIASKRMFD 60
+NAI+NKN D K C +Y +LFPCNECAK+IIQ+GIKEVI+M DK+ A++ +F+
Sbjct: 84 LNAIMNKNLTDVKGCSMYVALFPCNECAKLIIQAGIKEVIFMSDKYHDSDEATAARLLFN 143
Query: 61 AAKVHY 66
A V +
Sbjct: 144 MAGVTF 149
>gi|194212324|ref|XP_001917931.1| PREDICTED: deoxycytidylate deaminase-like [Equus caballus]
Length = 178
Score = 173 bits (438), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 80/125 (64%), Positives = 98/125 (78%), Gaps = 5/125 (4%)
Query: 83 KRVDDVLEWHEYFMASAFLVAKRSKDPVTRVGAVIVNEDNKIVGTGYNGMPIGCSDDEFP 142
++ DD L+W EYFMA AFL A+RSKDP ++V A IVN +NKIVG GYNGMP GCSDD P
Sbjct: 7 RKRDDYLQWPEYFMAVAFLSAQRSKDPNSQVAACIVNAENKIVGIGYNGMPNGCSDDLLP 66
Query: 143 WDKNTHDELD-----MCHAEMNAILNKNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVI 197
W + ++LD +CHAE+NAI+NKNSAD K C +Y +LFPCNECAK+IIQ+GIKEVI
Sbjct: 67 WRRTAENKLDTKYPYVCHAELNAIMNKNSADVKGCTMYVALFPCNECAKLIIQTGIKEVI 126
Query: 198 YMCDK 202
+M DK
Sbjct: 127 FMSDK 131
Score = 85.9 bits (211), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 38/66 (57%), Positives = 50/66 (75%)
Query: 1 MNAILNKNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIYMCDKHKQKPATIASKRMFD 60
+NAI+NKNSAD K C +Y +LFPCNECAK+IIQ+GIKEVI+M DK+ A++ +FD
Sbjct: 87 LNAIMNKNSADVKGCTMYVALFPCNECAKLIIQTGIKEVIFMSDKYHDSDEATAARLLFD 146
Query: 61 AAKVHY 66
A V +
Sbjct: 147 MAGVTF 152
>gi|156554302|ref|XP_001602407.1| PREDICTED: deoxycytidylate deaminase-like [Nasonia vitripennis]
Length = 206
Score = 173 bits (438), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 84/133 (63%), Positives = 96/133 (72%), Gaps = 5/133 (3%)
Query: 76 VQNGSPHKRVDDVLEWHEYFMASAFLVAKRSKDPVTRVGAVIVNEDNKIVGTGYNGMPIG 135
VQ + + D L+W +YFM+ AFL + RSKDP T+VGA IVNED KIVG GYNGMPIG
Sbjct: 20 VQTRDLNNKRTDFLDWDDYFMSVAFLASMRSKDPCTQVGACIVNEDKKIVGVGYNGMPIG 79
Query: 136 CSDDEFPWDKNTHDELD-----MCHAEMNAILNKNSADTKRCKLYTSLFPCNECAKVIIQ 190
C+DD+F W K ELD +CHAE+NAILNKNS + K C LY LFPCNECAKVIIQ
Sbjct: 80 CNDDDFSWKKAHESELDSKFLYVCHAELNAILNKNSENVKNCTLYVGLFPCNECAKVIIQ 139
Query: 191 SGIKEVIYMCDKQ 203
SGIK V YM DK
Sbjct: 140 SGIKRVYYMSDKH 152
Score = 98.6 bits (244), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 48/66 (72%), Positives = 51/66 (77%)
Query: 1 MNAILNKNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIYMCDKHKQKPATIASKRMFD 60
+NAILNKNS + K C LY LFPCNECAKVIIQSGIK V YM DKH K T A+KRMFD
Sbjct: 107 LNAILNKNSENVKNCTLYVGLFPCNECAKVIIQSGIKRVYYMSDKHAHKVRTKAAKRMFD 166
Query: 61 AAKVHY 66
AAKV Y
Sbjct: 167 AAKVEY 172
>gi|156372900|ref|XP_001629273.1| predicted protein [Nematostella vectensis]
gi|156216269|gb|EDO37210.1| predicted protein [Nematostella vectensis]
Length = 208
Score = 172 bits (436), Expect = 7e-41, Method: Compositional matrix adjust.
Identities = 77/121 (63%), Positives = 98/121 (80%), Gaps = 5/121 (4%)
Query: 87 DVLEWHEYFMASAFLVAKRSKDPVTRVGAVIVNEDNKIVGTGYNGMPIGCSDDEFPWDKN 146
D + W +YFM+ AFL A+RSKDP ++VGA IVN++ KIVG GYNGMP GCSDDE PW+++
Sbjct: 45 DYISWDDYFMSVAFLSAQRSKDPSSQVGACIVNKERKIVGIGYNGMPNGCSDDELPWNRH 104
Query: 147 THDELD-----MCHAEMNAILNKNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIYMCD 201
DELD +CHAEMNAILNKNSAD K C +Y +LFPCNEC+K+IIQ+G+KEV+++ D
Sbjct: 105 ADDELDTKYPYVCHAEMNAILNKNSADVKGCTVYVALFPCNECSKIIIQAGLKEVVFVSD 164
Query: 202 K 202
K
Sbjct: 165 K 165
Score = 92.4 bits (228), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 40/66 (60%), Positives = 53/66 (80%)
Query: 1 MNAILNKNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIYMCDKHKQKPATIASKRMFD 60
MNAILNKNSAD K C +Y +LFPCNEC+K+IIQ+G+KEV+++ DK+ KP+ AS+R+ D
Sbjct: 121 MNAILNKNSADVKGCTVYVALFPCNECSKIIIQAGLKEVVFVSDKYHDKPSMKASRRLLD 180
Query: 61 AAKVHY 66
A V Y
Sbjct: 181 LAGVKY 186
>gi|357622290|gb|EHJ73830.1| deoxycytidylate deaminase [Danaus plexippus]
Length = 159
Score = 171 bits (434), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 81/113 (71%), Positives = 92/113 (81%), Gaps = 5/113 (4%)
Query: 96 MASAFLVAKRSKDPVTRVGAVIVNEDNKIVGTGYNGMPIGCSDDEFPWDKNTHDELD--- 152
MA+AFL AKRSKDP +VGA IVN++NKIVG GYNGMPIGCSDDEFPW KNT +LD
Sbjct: 1 MATAFLAAKRSKDPSYQVGACIVNKENKIVGVGYNGMPIGCSDDEFPWGKNTTSKLDSKF 60
Query: 153 --MCHAEMNAILNKNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIYMCDKQ 203
+CHAEMNAILNKNS+D K C +Y LFPCNECAK+IIQSGI EVIY D++
Sbjct: 61 LYVCHAEMNAILNKNSSDVKDCTIYVGLFPCNECAKIIIQSGITEVIYFSDEK 113
Score = 105 bits (262), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 49/77 (63%), Positives = 57/77 (74%)
Query: 1 MNAILNKNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIYMCDKHKQKPATIASKRMFD 60
MNAILNKNS+D K C +Y LFPCNECAK+IIQSGI EVIY D+ KP IASK+MFD
Sbjct: 68 MNAILNKNSSDVKDCTIYVGLFPCNECAKIIIQSGITEVIYFSDEKGHKPKYIASKKMFD 127
Query: 61 AAKVHYWSEMDKMNGVQ 77
AA V YW + K N ++
Sbjct: 128 AAGVKYWQYIPKNNKIE 144
>gi|383855770|ref|XP_003703383.1| PREDICTED: deoxycytidylate deaminase-like [Megachile rotundata]
Length = 277
Score = 170 bits (430), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 85/133 (63%), Positives = 99/133 (74%), Gaps = 5/133 (3%)
Query: 76 VQNGSPHKRVDDVLEWHEYFMASAFLVAKRSKDPVTRVGAVIVNEDNKIVGTGYNGMPIG 135
VQ S + L+W EYFMA AFL AKRSKDP T+VGA IVN + +I+G GYNGMP G
Sbjct: 17 VQTNSEGNKNKRYLDWDEYFMAIAFLAAKRSKDPRTQVGACIVNSEKRILGIGYNGMPTG 76
Query: 136 CSDDEFPWDKNTHDELD-----MCHAEMNAILNKNSADTKRCKLYTSLFPCNECAKVIIQ 190
CSDDEFPW K+ D+L +CHAE+NAILNKN +D + C +Y +LFPCNECAKVIIQ
Sbjct: 77 CSDDEFPWGKDYDDKLKDKSYYVCHAEVNAILNKNCSDVRNCTIYVALFPCNECAKVIIQ 136
Query: 191 SGIKEVIYMCDKQ 203
SGIK VIYM DKQ
Sbjct: 137 SGIKLVIYMSDKQ 149
Score = 95.5 bits (236), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 45/66 (68%), Positives = 51/66 (77%)
Query: 1 MNAILNKNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIYMCDKHKQKPATIASKRMFD 60
+NAILNKN +D + C +Y +LFPCNECAKVIIQSGIK VIYM DK K TIA+KRMF
Sbjct: 104 VNAILNKNCSDVRNCTIYVALFPCNECAKVIIQSGIKLVIYMSDKQAHKKKTIAAKRMFQ 163
Query: 61 AAKVHY 66
AA V Y
Sbjct: 164 AAGVQY 169
>gi|196012527|ref|XP_002116126.1| hypothetical protein TRIADDRAFT_50803 [Trichoplax adhaerens]
gi|190581449|gb|EDV21526.1| hypothetical protein TRIADDRAFT_50803 [Trichoplax adhaerens]
Length = 157
Score = 170 bits (430), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 81/135 (60%), Positives = 98/135 (72%), Gaps = 5/135 (3%)
Query: 73 MNGVQNGSPHKRVDDVLEWHEYFMASAFLVAKRSKDPVTRVGAVIVNEDNKIVGTGYNGM 132
MN K+ D + W EYFMA AFL ++RSKDP T+VGA IVN++NKIVG GYNGM
Sbjct: 1 MNPTNGEEVVKKRTDYISWEEYFMAVAFLSSQRSKDPNTQVGACIVNQENKIVGIGYNGM 60
Query: 133 PIGCSDDEFPWDKNTHDELD-----MCHAEMNAILNKNSADTKRCKLYTSLFPCNECAKV 187
P GC+DD PW + + LD +CHAEMNAILNKNS D K C +Y +LFPCNECAK+
Sbjct: 61 PNGCNDDALPWAREASNALDTKYPYVCHAEMNAILNKNSFDLKGCIIYVALFPCNECAKL 120
Query: 188 IIQSGIKEVIYMCDK 202
IIQSGIKEV+++ DK
Sbjct: 121 IIQSGIKEVVFVSDK 135
Score = 89.7 bits (221), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 41/66 (62%), Positives = 51/66 (77%)
Query: 1 MNAILNKNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIYMCDKHKQKPATIASKRMFD 60
MNAILNKNS D K C +Y +LFPCNECAK+IIQSGIKEV+++ DK+ A+ AS+R+ D
Sbjct: 91 MNAILNKNSFDLKGCIIYVALFPCNECAKLIIQSGIKEVVFVSDKYHDTAASTASRRLLD 150
Query: 61 AAKVHY 66
A V Y
Sbjct: 151 LAGVKY 156
>gi|320165206|gb|EFW42105.1| deoxycytidylate deaminase [Capsaspora owczarzaki ATCC 30864]
Length = 192
Score = 170 bits (430), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 78/125 (62%), Positives = 95/125 (76%), Gaps = 5/125 (4%)
Query: 83 KRVDDVLEWHEYFMASAFLVAKRSKDPVTRVGAVIVNEDNKIVGTGYNGMPIGCSDDEFP 142
K+ D L W +YFMA AFL A+RSKDP ++VGA IVN++NKIVG GYNGMP GC+DD P
Sbjct: 29 KKRQDYLPWADYFMAVAFLSAQRSKDPSSQVGACIVNQENKIVGIGYNGMPNGCNDDLLP 88
Query: 143 WDKNTHDELD-----MCHAEMNAILNKNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVI 197
W + LD +CHAE+NA+LNKN++D K C +Y +LFPCNECAK+IIQSGIKEVI
Sbjct: 89 WARTAESPLDTKYMYVCHAELNAVLNKNASDVKGCTIYVALFPCNECAKIIIQSGIKEVI 148
Query: 198 YMCDK 202
Y DK
Sbjct: 149 YKSDK 153
Score = 96.3 bits (238), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 41/76 (53%), Positives = 56/76 (73%)
Query: 1 MNAILNKNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIYMCDKHKQKPATIASKRMFD 60
+NA+LNKN++D K C +Y +LFPCNECAK+IIQSGIKEVIY DK+ +P + S+R+FD
Sbjct: 109 LNAVLNKNASDVKGCTIYVALFPCNECAKIIIQSGIKEVIYKSDKYHDRPEFVVSRRLFD 168
Query: 61 AAKVHYWSEMDKMNGV 76
A + Y + KM +
Sbjct: 169 MAGIKYRQHIPKMKQI 184
>gi|390342508|ref|XP_781375.3| PREDICTED: deoxycytidylate deaminase-like [Strongylocentrotus
purpuratus]
Length = 235
Score = 169 bits (428), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 77/140 (55%), Positives = 105/140 (75%), Gaps = 6/140 (4%)
Query: 68 SEMDKMNGVQNGSPHKRVDDVLEWHEYFMASAFLVAKRSKDPVTRVGAVIVNEDNKIVGT 127
+E + + +G KR+D L W +YFM+ AFL A+RSKDP ++VGA IVNE+ KIVG
Sbjct: 43 NEKSEPSNTTSGQATKRLD-YLAWEDYFMSVAFLSAQRSKDPSSQVGACIVNEEKKIVGI 101
Query: 128 GYNGMPIGCSDDEFPWDKNTHDELD-----MCHAEMNAILNKNSADTKRCKLYTSLFPCN 182
GYNGMP GC+DD PW +++ D L+ +CHAE+NAI+NKNSAD K C +Y +LFPCN
Sbjct: 102 GYNGMPNGCNDDVLPWSRDSEDWLETKYPYVCHAELNAIMNKNSADVKGCTMYVALFPCN 161
Query: 183 ECAKVIIQSGIKEVIYMCDK 202
ECAKVIIQSGI++++++ D+
Sbjct: 162 ECAKVIIQSGIRKIVFLSDR 181
Score = 93.2 bits (230), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 40/66 (60%), Positives = 54/66 (81%)
Query: 1 MNAILNKNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIYMCDKHKQKPATIASKRMFD 60
+NAI+NKNSAD K C +Y +LFPCNECAKVIIQSGI++++++ D++++K ASKRMFD
Sbjct: 137 LNAIMNKNSADVKGCTMYVALFPCNECAKVIIQSGIRKIVFLSDRYQEKDTIKASKRMFD 196
Query: 61 AAKVHY 66
A V Y
Sbjct: 197 YAGVTY 202
>gi|328785680|ref|XP_392413.3| PREDICTED: deoxycytidylate deaminase-like isoform 1 [Apis
mellifera]
Length = 189
Score = 168 bits (425), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 83/133 (62%), Positives = 100/133 (75%), Gaps = 6/133 (4%)
Query: 78 NGSPHKRVDDVLEWHEYFMASAFLVAKRSKDPVTRVGAVIVNEDNKIVGTGYNGMPIGCS 137
N +KR ++ ++W +YFMA AFL AKRSKDP T+VGA IVNED +IVG GYNGMP GCS
Sbjct: 16 NKDNNKR-ENYIDWEDYFMAIAFLSAKRSKDPRTQVGACIVNEDKQIVGIGYNGMPKGCS 74
Query: 138 DDEFPWDKNTHDELD-----MCHAEMNAILNKNSADTKRCKLYTSLFPCNECAKVIIQSG 192
DDEF W KN++D L +CHAE+NAILNKN + K C +Y +LFPCNECAKVIIQSG
Sbjct: 75 DDEFSWCKNSNDSLKNKSLYVCHAEVNAILNKNCSSVKNCTIYVALFPCNECAKVIIQSG 134
Query: 193 IKEVIYMCDKQMS 205
IK V Y+ DK +
Sbjct: 135 IKLVKYVSDKHAT 147
Score = 90.5 bits (223), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 43/66 (65%), Positives = 51/66 (77%)
Query: 1 MNAILNKNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIYMCDKHKQKPATIASKRMFD 60
+NAILNKN + K C +Y +LFPCNECAKVIIQSGIK V Y+ DKH K TIA+K+MFD
Sbjct: 100 VNAILNKNCSSVKNCTIYVALFPCNECAKVIIQSGIKLVKYVSDKHATKEKTIAAKKMFD 159
Query: 61 AAKVHY 66
AA + Y
Sbjct: 160 AAGIIY 165
>gi|198431901|ref|XP_002131408.1| PREDICTED: similar to dCMP deaminase [Ciona intestinalis]
Length = 191
Score = 167 bits (423), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 82/138 (59%), Positives = 102/138 (73%), Gaps = 7/138 (5%)
Query: 71 DKMNGVQNGSPHKRVDDVLEWHEYFMASAFLVAKRSKDPVTRVGAVIVNEDNKIVGTGYN 130
++ NG N + + +D LEW +YFM+ AFL A+RSKDP T+VGA IVN++NKIVG GYN
Sbjct: 11 EQTNG-NNKDLNTKREDYLEWKDYFMSVAFLSAQRSKDPSTQVGACIVNDENKIVGIGYN 69
Query: 131 GMPIGCSDDEFPWDKNTHDELD-----MCHAEMNAILNKNSADTKRCKLYTSLFPCNECA 185
GMP GC DDE PW + T D LD +CHAEMNAI+NKN + C+++ +LFPCNECA
Sbjct: 70 GMPNGCHDDELPWSR-TGDWLDTKYPYVCHAEMNAIMNKNCSSVSGCRIFVALFPCNECA 128
Query: 186 KVIIQSGIKEVIYMCDKQ 203
K+IIQSGIKEV YM DK
Sbjct: 129 KLIIQSGIKEVFYMSDKH 146
Score = 89.0 bits (219), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 40/76 (52%), Positives = 53/76 (69%)
Query: 1 MNAILNKNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIYMCDKHKQKPATIASKRMFD 60
MNAI+NKN + C+++ +LFPCNECAK+IIQSGIKEV YM DKHK + IAS+++ D
Sbjct: 101 MNAIMNKNCSSVSGCRIFVALFPCNECAKLIIQSGIKEVFYMSDKHKDRDYMIASRKLLD 160
Query: 61 AAKVHYWSEMDKMNGV 76
A V Y + K +
Sbjct: 161 LAGVKYQQHIPKQRKI 176
>gi|349806227|gb|AEQ18586.1| putative dcmp deaminase [Hymenochirus curtipes]
Length = 159
Score = 167 bits (422), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 78/122 (63%), Positives = 95/122 (77%), Gaps = 6/122 (4%)
Query: 86 DDVLEWHEYFMASAFLVAKRSKDPVTRVGAVIVNEDNKIVGTGYNGMPIGCSDDEFPWDK 145
+D LEW EYFM+ AFL A+RSKDP ++VGA IVN +NKIVG GYNGMP GC DD PW +
Sbjct: 1 EDYLEWPEYFMSVAFLAAQRSKDP-SQVGACIVNTENKIVGVGYNGMPNGCDDDVLPWAR 59
Query: 146 NTHDELD-----MCHAEMNAILNKNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIYMC 200
D+L +CHAE+NAI+NKNSAD K C +Y +LFPCNECAK+IIQ+GI+EV+YM
Sbjct: 60 TAEDKLGTKYPYVCHAELNAIMNKNSADVKGCTMYVALFPCNECAKLIIQAGIREVVYMS 119
Query: 201 DK 202
DK
Sbjct: 120 DK 121
Score = 91.7 bits (226), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 40/66 (60%), Positives = 51/66 (77%)
Query: 1 MNAILNKNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIYMCDKHKQKPATIASKRMFD 60
+NAI+NKNSAD K C +Y +LFPCNECAK+IIQ+GI+EV+YM DK+ P AS+ MFD
Sbjct: 77 LNAIMNKNSADVKGCTMYVALFPCNECAKLIIQAGIREVVYMSDKYHGNPEMKASRHMFD 136
Query: 61 AAKVHY 66
A + Y
Sbjct: 137 LAGIKY 142
>gi|221106915|ref|XP_002154094.1| PREDICTED: deoxycytidylate deaminase-like [Hydra magnipapillata]
Length = 203
Score = 166 bits (421), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 76/126 (60%), Positives = 97/126 (76%), Gaps = 5/126 (3%)
Query: 82 HKRVDDVLEWHEYFMASAFLVAKRSKDPVTRVGAVIVNEDNKIVGTGYNGMPIGCSDDEF 141
+K+ D L W +YFMA AFL A+RSKDPVT+VGA IVN +NKIVG GYNGMPIGCSD+
Sbjct: 16 NKKRSDYLSWEDYFMAIAFLSAQRSKDPVTQVGACIVNNENKIVGIGYNGMPIGCSDEVL 75
Query: 142 PWDKNTHDELD-----MCHAEMNAILNKNSADTKRCKLYTSLFPCNECAKVIIQSGIKEV 196
PW + ++ +CHAE+NA+LNKNSAD + C +YT+LFPCNECAK+I+QS IKE+
Sbjct: 76 PWSRIGESFMETKYAYVCHAELNAVLNKNSADVQDCIIYTTLFPCNECAKIILQSRIKEI 135
Query: 197 IYMCDK 202
+Y +K
Sbjct: 136 VYYSNK 141
Score = 89.0 bits (219), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 37/66 (56%), Positives = 54/66 (81%)
Query: 1 MNAILNKNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIYMCDKHKQKPATIASKRMFD 60
+NA+LNKNSAD + C +YT+LFPCNECAK+I+QS IKE++Y +K+K +P T A+++MFD
Sbjct: 97 LNAVLNKNSADVQDCIIYTTLFPCNECAKIILQSRIKEIVYYSNKYKDRPETQAAEKMFD 156
Query: 61 AAKVHY 66
A + +
Sbjct: 157 LAGIKH 162
>gi|149021461|gb|EDL78924.1| similar to 6030466N05Rik protein, isoform CRA_b [Rattus norvegicus]
Length = 175
Score = 166 bits (419), Expect = 7e-39, Method: Compositional matrix adjust.
Identities = 76/123 (61%), Positives = 93/123 (75%), Gaps = 5/123 (4%)
Query: 83 KRVDDVLEWHEYFMASAFLVAKRSKDPVTRVGAVIVNEDNKIVGTGYNGMPIGCSDDEFP 142
K+ DD LEW EYFMA AFL A+RSKDP ++VGA IVN +NKIVG GYNGMP GCSDD P
Sbjct: 13 KKRDDYLEWPEYFMAVAFLSAQRSKDPSSQVGACIVNTENKIVGIGYNGMPNGCSDDLLP 72
Query: 143 WDKNTHDELD-----MCHAEMNAILNKNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVI 197
W + ++LD +CHAE+NAI+NKNSAD K C +Y +LFPCNECAK+IIQ+G +
Sbjct: 73 WRRTAENKLDTKYPYVCHAELNAIMNKNSADVKGCSMYVALFPCNECAKLIIQAGRSQAF 132
Query: 198 YMC 200
+C
Sbjct: 133 PIC 135
Score = 65.9 bits (159), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 31/66 (46%), Positives = 43/66 (65%), Gaps = 6/66 (9%)
Query: 1 MNAILNKNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIYMCDKHKQKPATIASKRMFD 60
+NAI+NKNSAD K C +Y +LFPCNECAK+IIQ+G + +C P + S +
Sbjct: 93 LNAIMNKNSADVKGCSMYVALFPCNECAKLIIQAGRSQAFPIC------PIFMGSLLVSS 146
Query: 61 AAKVHY 66
A+VH+
Sbjct: 147 PAQVHF 152
>gi|349933854|dbj|GAA29155.1| dCMP deaminase [Clonorchis sinensis]
Length = 190
Score = 165 bits (417), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 82/142 (57%), Positives = 102/142 (71%), Gaps = 9/142 (6%)
Query: 67 WSEMDKMNGVQNGSPHKRVDDVLEWHEYFMASAFLVAKRSKDPVTRVGAVIVNEDNKIVG 126
+S M+ +N NGS KR D + W EYFM+ A L A RSKDP T+VGA I NE+NKIVG
Sbjct: 18 FSAMEHLN--LNGS-QKRTD-YISWDEYFMSVALLSAMRSKDPTTQVGACITNEENKIVG 73
Query: 127 TGYNGMPIGCSDDEFPWDKNTHDEL-----DMCHAEMNAILNKNSADTKRCKLYTSLFPC 181
GYNGMP G SDDE PW K + +EL +CHAE+NA+LN+N A + C LY S+FPC
Sbjct: 74 IGYNGMPRGLSDDEMPWGKTSENELLNKYFYVCHAELNAVLNRNHATSSGCTLYASMFPC 133
Query: 182 NECAKVIIQSGIKEVIYMCDKQ 203
NECAKV+IQ+GIKEV+Y +K+
Sbjct: 134 NECAKVLIQAGIKEVVYFDEKK 155
Score = 75.5 bits (184), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 34/65 (52%), Positives = 45/65 (69%)
Query: 1 MNAILNKNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIYMCDKHKQKPATIASKRMFD 60
+NA+LN+N A + C LY S+FPCNECAKV+IQ+GIKEV+Y +K +ASK M +
Sbjct: 110 LNAVLNRNHATSSGCTLYASMFPCNECAKVLIQAGIKEVVYFDEKKGDIGEYVASKLMLE 169
Query: 61 AAKVH 65
A V
Sbjct: 170 KAGVR 174
>gi|405950806|gb|EKC18769.1| Deoxycytidylate deaminase [Crassostrea gigas]
Length = 169
Score = 165 bits (417), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 75/112 (66%), Positives = 92/112 (82%), Gaps = 5/112 (4%)
Query: 96 MASAFLVAKRSKDPVTRVGAVIVNEDNKIVGTGYNGMPIGCSDDEFPWDKNTHD-----E 150
MA+AFL A+RSKDP T+VGA IVNE+NKIVG GYNGMP+GC DDE PW +++ + +
Sbjct: 1 MATAFLSAQRSKDPRTQVGACIVNEENKIVGIGYNGMPVGCHDDEMPWGRDSDNILETKQ 60
Query: 151 LDMCHAEMNAILNKNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIYMCDK 202
L +CHAE+NA+LNKNSAD K C +Y +LFPCNECAKV+IQSGIKEV+Y DK
Sbjct: 61 LYVCHAELNAVLNKNSADVKNCTIYVALFPCNECAKVVIQSGIKEVVYYSDK 112
Score = 99.4 bits (246), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 45/76 (59%), Positives = 56/76 (73%)
Query: 1 MNAILNKNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIYMCDKHKQKPATIASKRMFD 60
+NA+LNKNSAD K C +Y +LFPCNECAKV+IQSGIKEV+Y DK+K KP +ASK+M D
Sbjct: 68 LNAVLNKNSADVKNCTIYVALFPCNECAKVVIQSGIKEVVYYSDKYKDKPEFVASKKMLD 127
Query: 61 AAKVHYWSEMDKMNGV 76
A V Y + K +
Sbjct: 128 MAGVKYRQHIPKQKQI 143
>gi|198412532|ref|XP_002130499.1| PREDICTED: similar to dCMP deaminase [Ciona intestinalis]
Length = 191
Score = 164 bits (414), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 81/138 (58%), Positives = 101/138 (73%), Gaps = 7/138 (5%)
Query: 71 DKMNGVQNGSPHKRVDDVLEWHEYFMASAFLVAKRSKDPVTRVGAVIVNEDNKIVGTGYN 130
++ NG N + + +D LEW +YFM+ AFL A+RSKDP T+VGA IVN++NKIVG GYN
Sbjct: 11 EQTNG-NNKDLNTKREDYLEWKDYFMSVAFLSAQRSKDPSTQVGACIVNDENKIVGIGYN 69
Query: 131 GMPIGCSDDEFPWDKNTHDELD-----MCHAEMNAILNKNSADTKRCKLYTSLFPCNECA 185
GMP GC DDE W + T D LD +CHAEMNAI+NKN + C+++ +LFPCNECA
Sbjct: 70 GMPNGCHDDELSWSR-TGDWLDTKYPYVCHAEMNAIMNKNCSSVSGCRIFVALFPCNECA 128
Query: 186 KVIIQSGIKEVIYMCDKQ 203
K+IIQSGIKEV YM DK
Sbjct: 129 KLIIQSGIKEVFYMSDKH 146
Score = 89.0 bits (219), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 40/76 (52%), Positives = 53/76 (69%)
Query: 1 MNAILNKNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIYMCDKHKQKPATIASKRMFD 60
MNAI+NKN + C+++ +LFPCNECAK+IIQSGIKEV YM DKHK + IAS+++ D
Sbjct: 101 MNAIMNKNCSSVSGCRIFVALFPCNECAKLIIQSGIKEVFYMSDKHKDRDYMIASRKLLD 160
Query: 61 AAKVHYWSEMDKMNGV 76
A V Y + K +
Sbjct: 161 LAGVKYQQHIPKQRKI 176
>gi|348685885|gb|EGZ25700.1| hypothetical protein PHYSODRAFT_480606 [Phytophthora sojae]
Length = 256
Score = 162 bits (411), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 80/135 (59%), Positives = 93/135 (68%), Gaps = 7/135 (5%)
Query: 75 GVQNGSPHKRVDDVLEWHEYFMASAFLVAKRSKDPVTRVGAVIVNEDNKIVGTGYNGMPI 134
V N S ++ D L W +YFM+ AFL A RSKDP T+VGA IVN + KIVG GYNG P
Sbjct: 83 AVANSSVVQKRSDYLSWDDYFMSVAFLSAMRSKDPSTQVGACIVNPERKIVGIGYNGFPN 142
Query: 135 GCSDDEFPW--DKNTHDELD-----MCHAEMNAILNKNSADTKRCKLYTSLFPCNECAKV 187
GC DDE PW + T+ LD +CHAEMNAILNKNS D K C +Y +LFPCNECAK+
Sbjct: 143 GCGDDELPWARESETNSPLDTKYPYVCHAEMNAILNKNSTDVKGCTIYVALFPCNECAKL 202
Query: 188 IIQSGIKEVIYMCDK 202
IIQSGI V+Y DK
Sbjct: 203 IIQSGISRVVYCSDK 217
Score = 87.8 bits (216), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 40/66 (60%), Positives = 48/66 (72%)
Query: 1 MNAILNKNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIYMCDKHKQKPATIASKRMFD 60
MNAILNKNS D K C +Y +LFPCNECAK+IIQSGI V+Y DK+ Q +AS+R+ D
Sbjct: 173 MNAILNKNSTDVKGCTIYVALFPCNECAKLIIQSGISRVVYCSDKYNQDWKFVASRRLLD 232
Query: 61 AAKVHY 66
A V Y
Sbjct: 233 MAGVQY 238
>gi|374373952|ref|ZP_09631611.1| dCMP deaminase [Niabella soli DSM 19437]
gi|373233394|gb|EHP53188.1| dCMP deaminase [Niabella soli DSM 19437]
Length = 165
Score = 162 bits (411), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 77/122 (63%), Positives = 91/122 (74%), Gaps = 6/122 (4%)
Query: 87 DVLEWHEYFMASAFLVAKRSKDPVTRVGAVIVNEDNKIVGTGYNGMPIGCSDDEFPWDKN 146
D + W EYFM A L KRSKDP T+VGA IVN+ NKIVG GYNG+PIG SDDEFPWDK
Sbjct: 6 DYISWDEYFMGVALLSGKRSKDPSTQVGACIVNQQNKIVGVGYNGLPIGISDDEFPWDKE 65
Query: 147 THDELD-----MCHAEMNAILNKNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIYMCD 201
D L+ +CHAE+NAILN + + CK+YT+LFPCNEC+K IIQSGIKEV+Y+ D
Sbjct: 66 G-DFLNTKYPYVCHAELNAILNNIGINLEGCKIYTALFPCNECSKAIIQSGIKEVVYLSD 124
Query: 202 KQ 203
K
Sbjct: 125 KH 126
Score = 84.3 bits (207), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 37/64 (57%), Positives = 48/64 (75%)
Query: 1 MNAILNKNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIYMCDKHKQKPATIASKRMFD 60
+NAILN + + CK+YT+LFPCNEC+K IIQSGIKEV+Y+ DKH K + IASK+M
Sbjct: 81 LNAILNNIGINLEGCKIYTALFPCNECSKAIIQSGIKEVVYLSDKHAHKESAIASKKMLQ 140
Query: 61 AAKV 64
A +
Sbjct: 141 TAGI 144
>gi|340715014|ref|XP_003396016.1| PREDICTED: deoxycytidylate deaminase-like [Bombus terrestris]
Length = 200
Score = 162 bits (409), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 76/137 (55%), Positives = 97/137 (70%), Gaps = 5/137 (3%)
Query: 70 MDKMNGVQNGSPHKRVDDVLEWHEYFMASAFLVAKRSKDPVTRVGAVIVNEDNKIVGTGY 129
++K+N + + + ++W EYFMA AFL AKRSKDP T+VGA IVNE+ +++G GY
Sbjct: 10 IEKINSESEQPSNNKRESYIDWEEYFMALAFLSAKRSKDPRTQVGACIVNEEKQVLGIGY 69
Query: 130 NGMPIGCSDDEFPWDKNTHDELD-----MCHAEMNAILNKNSADTKRCKLYTSLFPCNEC 184
NGMP GCSDD FPW K + D L+ +CHAE+NAILN + K C +Y SLFPCNEC
Sbjct: 70 NGMPNGCSDDVFPWTKESADPLERKSLYVCHAEINAILNTGYKNIKNCTIYVSLFPCNEC 129
Query: 185 AKVIIQSGIKEVIYMCD 201
AKVIIQSGI+ V Y+ D
Sbjct: 130 AKVIIQSGIRTVKYVSD 146
Score = 74.3 bits (181), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 40/66 (60%), Positives = 48/66 (72%)
Query: 1 MNAILNKNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIYMCDKHKQKPATIASKRMFD 60
+NAILN + K C +Y SLFPCNECAKVIIQSGI+ V Y+ DK+ +K A+KRMFD
Sbjct: 103 INAILNTGYKNIKNCTIYVSLFPCNECAKVIIQSGIRTVKYVSDKYAKKKKIQAAKRMFD 162
Query: 61 AAKVHY 66
AA V Y
Sbjct: 163 AAGVTY 168
>gi|242003371|ref|XP_002422714.1| Deoxycytidylate deaminase, putative [Pediculus humanus corporis]
gi|212505536|gb|EEB09976.1| Deoxycytidylate deaminase, putative [Pediculus humanus corporis]
Length = 172
Score = 161 bits (408), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 79/113 (69%), Positives = 89/113 (78%), Gaps = 5/113 (4%)
Query: 96 MASAFLVAKRSKDPVTRVGAVIVNEDNKIVGTGYNGMPIGCSDDEFPWDKNTHDELD--- 152
MA+AFL AKRSKDP T+VGA IV++D KIVG GYNG PIGC DD+FPW KN+ L+
Sbjct: 1 MANAFLAAKRSKDPSTQVGACIVDDDKKIVGIGYNGFPIGCDDDDFPWTKNSDSPLENKH 60
Query: 153 --MCHAEMNAILNKNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIYMCDKQ 203
+CHAEMNAILNKNSA+ K K+Y LFPCNECAK IIQSGIKEVIYM DK
Sbjct: 61 FYVCHAEMNAILNKNSANIKGSKIYVVLFPCNECAKFIIQSGIKEVIYMSDKH 113
Score = 79.3 bits (194), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 38/52 (73%), Positives = 42/52 (80%)
Query: 1 MNAILNKNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIYMCDKHKQKPAT 52
MNAILNKNSA+ K K+Y LFPCNECAK IIQSGIKEVIYM DKH ++ T
Sbjct: 68 MNAILNKNSANIKGSKIYVVLFPCNECAKFIIQSGIKEVIYMSDKHHERLQT 119
>gi|238859563|ref|NP_001154984.1| deoxycytidylate deaminase isoform 2 [Rattus norvegicus]
Length = 173
Score = 161 bits (408), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 74/114 (64%), Positives = 89/114 (78%), Gaps = 5/114 (4%)
Query: 83 KRVDDVLEWHEYFMASAFLVAKRSKDPVTRVGAVIVNEDNKIVGTGYNGMPIGCSDDEFP 142
K+ DD LEW EYFMA AFL A+RSKDP ++VGA IVN +NKIVG GYNGMP GCSDD P
Sbjct: 13 KKRDDYLEWPEYFMAVAFLSAQRSKDPSSQVGACIVNTENKIVGIGYNGMPNGCSDDLLP 72
Query: 143 WDKNTHDELD-----MCHAEMNAILNKNSADTKRCKLYTSLFPCNECAKVIIQS 191
W + ++LD +CHAE+NAI+NKNSAD K C +Y +LFPCNECAK+IIQ+
Sbjct: 73 WRRTAENKLDTKYPYVCHAELNAIMNKNSADVKGCSMYVALFPCNECAKLIIQA 126
Score = 58.2 bits (139), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 24/34 (70%), Positives = 30/34 (88%)
Query: 1 MNAILNKNSADTKRCKLYTSLFPCNECAKVIIQS 34
+NAI+NKNSAD K C +Y +LFPCNECAK+IIQ+
Sbjct: 93 LNAIMNKNSADVKGCSMYVALFPCNECAKLIIQA 126
>gi|301111742|ref|XP_002904950.1| deoxycytidylate deaminase [Phytophthora infestans T30-4]
gi|262095280|gb|EEY53332.1| deoxycytidylate deaminase [Phytophthora infestans T30-4]
Length = 252
Score = 160 bits (406), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 78/130 (60%), Positives = 91/130 (70%), Gaps = 7/130 (5%)
Query: 83 KRVDDVLEWHEYFMASAFLVAKRSKDPVTRVGAVIVNEDNKIVGTGYNGMPIGCSDDEFP 142
++ D L W +YFM+ AFL A RSKDP T+VGA IVN + KIVG GYNG P GC DDE P
Sbjct: 87 QKRSDYLSWDDYFMSVAFLSAMRSKDPSTQVGACIVNPERKIVGIGYNGFPNGCGDDELP 146
Query: 143 WDKN--THDELD-----MCHAEMNAILNKNSADTKRCKLYTSLFPCNECAKVIIQSGIKE 195
W + T+ LD +CHAEMNAILNKNS D K C +Y +LFPCNECAK+IIQSGI
Sbjct: 147 WARETATNSPLDTKYPYVCHAEMNAILNKNSTDVKGCSIYVALFPCNECAKLIIQSGIAR 206
Query: 196 VIYMCDKQMS 205
V+Y DK S
Sbjct: 207 VVYFSDKYKS 216
Score = 88.6 bits (218), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 40/66 (60%), Positives = 48/66 (72%)
Query: 1 MNAILNKNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIYMCDKHKQKPATIASKRMFD 60
MNAILNKNS D K C +Y +LFPCNECAK+IIQSGI V+Y DK+K +AS+R+ D
Sbjct: 169 MNAILNKNSTDVKGCSIYVALFPCNECAKLIIQSGIARVVYFSDKYKSDWKFVASRRLLD 228
Query: 61 AAKVHY 66
A V Y
Sbjct: 229 MAGVQY 234
>gi|307174184|gb|EFN64829.1| Deoxycytidylate deaminase [Camponotus floridanus]
Length = 168
Score = 160 bits (406), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 75/113 (66%), Positives = 88/113 (77%), Gaps = 6/113 (5%)
Query: 96 MASAFLVAKRSKDPVTRVGAVIVNEDNKIVGTGYNGMPIGCSDDEFPWDKNTHDE----- 150
MA AFL AKRSKDP T+VGA IVN D +IVG GYNGMP+GC DD+FPW K +H+
Sbjct: 1 MAIAFLSAKRSKDPCTQVGACIVNNDKRIVGIGYNGMPMGCDDDKFPWGKGSHNRDLDTK 60
Query: 151 -LDMCHAEMNAILNKNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIYMCDK 202
L +CHAE+NA+LNKNS+D K C +Y LFPCNECAKV+IQSGIK +IYM DK
Sbjct: 61 YLYVCHAEINAVLNKNSSDVKDCTMYVGLFPCNECAKVVIQSGIKTIIYMSDK 113
Score = 95.5 bits (236), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 43/66 (65%), Positives = 53/66 (80%)
Query: 1 MNAILNKNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIYMCDKHKQKPATIASKRMFD 60
+NA+LNKNS+D K C +Y LFPCNECAKV+IQSGIK +IYM DK+ K TIA+K+MFD
Sbjct: 69 INAVLNKNSSDVKDCTMYVGLFPCNECAKVVIQSGIKTIIYMSDKNGHKVETIAAKKMFD 128
Query: 61 AAKVHY 66
AA + Y
Sbjct: 129 AAGIKY 134
>gi|380020289|ref|XP_003694022.1| PREDICTED: LOW QUALITY PROTEIN: deoxycytidylate deaminase-like
[Apis florea]
Length = 183
Score = 160 bits (405), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 78/130 (60%), Positives = 95/130 (73%), Gaps = 12/130 (9%)
Query: 86 DDVLEWHEYFMASAFLVAKRSKDPVTRVGAVIVNEDNKIVGTGYNGMPIGCSDDEFPWDK 145
++ ++W +YFMA AFL AKRSKDP T+VGA IVNED +IVG GYNGMP GC+DDEF W K
Sbjct: 10 ENYIDWEDYFMAIAFLSAKRSKDPRTQVGACIVNEDKQIVGIGYNGMPKGCNDDEFSWCK 69
Query: 146 NTHDE------------LDMCHAEMNAILNKNSADTKRCKLYTSLFPCNECAKVIIQSGI 193
N++D+ +CHAE+NAILNKN + K C +Y +LFPCNECAKVIIQSGI
Sbjct: 70 NSNDDSLKNKSLYGIMITLLCHAEVNAILNKNCSSVKNCTIYVALFPCNECAKVIIQSGI 129
Query: 194 KEVIYMCDKQ 203
K V Y+ DK
Sbjct: 130 KLVKYVSDKH 139
Score = 79.3 bits (194), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 43/66 (65%), Positives = 51/66 (77%)
Query: 1 MNAILNKNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIYMCDKHKQKPATIASKRMFD 60
+NAILNKN + K C +Y +LFPCNECAKVIIQSGIK V Y+ DKH K TIA+K+MFD
Sbjct: 94 VNAILNKNCSSVKNCTIYVALFPCNECAKVIIQSGIKLVKYVSDKHATKKKTIAAKKMFD 153
Query: 61 AAKVHY 66
AA + Y
Sbjct: 154 AAGITY 159
>gi|324503290|gb|ADY41431.1| Deoxycytidylate deaminase [Ascaris suum]
Length = 284
Score = 160 bits (405), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 76/125 (60%), Positives = 94/125 (75%), Gaps = 5/125 (4%)
Query: 83 KRVDDVLEWHEYFMASAFLVAKRSKDPVTRVGAVIVNEDNKIVGTGYNGMPIGCSDDEFP 142
++ ++ L W EYFMA A L A+RSKDPVT+VGAVIVN D KI+G+GYNGMP GCSDD P
Sbjct: 103 RKREEYLSWEEYFMAVACLAAQRSKDPVTQVGAVIVNPDLKIIGSGYNGMPNGCSDDVMP 162
Query: 143 WDKNTHDELD-----MCHAEMNAILNKNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVI 197
W K++ + L+ +CHAEMNAILN+N K +YT LFPCNECAK+IIQ+GI EV+
Sbjct: 163 WGKDSDNPLETKYPFVCHAEMNAILNRNCESVKGSTIYTVLFPCNECAKLIIQAGISEVV 222
Query: 198 YMCDK 202
Y DK
Sbjct: 223 YKRDK 227
Score = 76.3 bits (186), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 39/66 (59%), Positives = 45/66 (68%), Gaps = 1/66 (1%)
Query: 1 MNAILNKNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIYMCDKHKQKPATIASKRMFD 60
MNAILN+N K +YT LFPCNECAK+IIQ+GI EV+Y DK K IASK+MFD
Sbjct: 183 MNAILNRNCESVKGSTIYTVLFPCNECAKLIIQAGISEVVYKRDK-PDKVEIIASKKMFD 241
Query: 61 AAKVHY 66
V Y
Sbjct: 242 ITGVRY 247
>gi|74216091|dbj|BAE23721.1| unnamed protein product [Mus musculus]
Length = 150
Score = 160 bits (404), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 74/114 (64%), Positives = 89/114 (78%), Gaps = 5/114 (4%)
Query: 83 KRVDDVLEWHEYFMASAFLVAKRSKDPVTRVGAVIVNEDNKIVGTGYNGMPIGCSDDEFP 142
K+ DD LEW EYFMA AFL A+RSKDP ++VGA IVN +NKIVG GYNGMP GCSDD P
Sbjct: 13 KKRDDYLEWPEYFMAVAFLSAQRSKDPSSQVGACIVNTENKIVGIGYNGMPNGCSDDLLP 72
Query: 143 WDKNTHDELD-----MCHAEMNAILNKNSADTKRCKLYTSLFPCNECAKVIIQS 191
W + ++LD +CHAE+NAI+NKNSAD K C +Y +LFPCNECAK+IIQ+
Sbjct: 73 WRRTAENKLDTKYPYVCHAELNAIMNKNSADVKGCSMYVALFPCNECAKLIIQA 126
Score = 58.2 bits (139), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 24/34 (70%), Positives = 30/34 (88%)
Query: 1 MNAILNKNSADTKRCKLYTSLFPCNECAKVIIQS 34
+NAI+NKNSAD K C +Y +LFPCNECAK+IIQ+
Sbjct: 93 LNAIMNKNSADVKGCSMYVALFPCNECAKLIIQA 126
>gi|350417220|ref|XP_003491315.1| PREDICTED: deoxycytidylate deaminase-like, partial [Bombus
impatiens]
Length = 192
Score = 160 bits (404), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 78/137 (56%), Positives = 94/137 (68%), Gaps = 5/137 (3%)
Query: 70 MDKMNGVQNGSPHKRVDDVLEWHEYFMASAFLVAKRSKDPVTRVGAVIVNEDNKIVGTGY 129
++K+N + ++W +YFMA AFL AKRSKDP T+VGA IVNE ++VG GY
Sbjct: 10 IEKINSENEQPSSNKRKSYIDWDDYFMALAFLSAKRSKDPRTQVGACIVNEQKQVVGIGY 69
Query: 130 NGMPIGCSDDEFPWDKNTHDELD-----MCHAEMNAILNKNSADTKRCKLYTSLFPCNEC 184
NGMP GCSDD FPW K + D L+ +CHAE+NAILN D K C +Y SLFPCNEC
Sbjct: 70 NGMPNGCSDDVFPWTKESVDPLETKTLYVCHAEVNAILNTGCKDIKNCTIYVSLFPCNEC 129
Query: 185 AKVIIQSGIKEVIYMCD 201
AKVIIQSGIK V Y+ D
Sbjct: 130 AKVIIQSGIKTVKYVSD 146
Score = 74.7 bits (182), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 41/66 (62%), Positives = 47/66 (71%)
Query: 1 MNAILNKNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIYMCDKHKQKPATIASKRMFD 60
+NAILN D K C +Y SLFPCNECAKVIIQSGIK V Y+ DK+ +K A+KRMFD
Sbjct: 103 VNAILNTGCKDIKNCTIYVSLFPCNECAKVIIQSGIKTVKYVSDKYAKKKKIQAAKRMFD 162
Query: 61 AAKVHY 66
A V Y
Sbjct: 163 AVGVTY 168
>gi|47214735|emb|CAG01270.1| unnamed protein product [Tetraodon nigroviridis]
Length = 114
Score = 159 bits (401), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 73/112 (65%), Positives = 87/112 (77%), Gaps = 5/112 (4%)
Query: 86 DDVLEWHEYFMASAFLVAKRSKDPVTRVGAVIVNEDNKIVGTGYNGMPIGCSDDEFPWDK 145
+D LEW EYFMA AFL A+RSKDP ++VGA IVN +NKIVG GYNGMP GC DD PW +
Sbjct: 3 EDYLEWPEYFMAVAFLSAQRSKDPSSQVGACIVNPENKIVGIGYNGMPNGCDDDLLPWSR 62
Query: 146 NTHDELD-----MCHAEMNAILNKNSADTKRCKLYTSLFPCNECAKVIIQSG 192
+ D LD +CHAE+NAI+NKNSAD K C +Y +LFPCNECAK+IIQ+G
Sbjct: 63 SAEDHLDTKYPYVCHAELNAIMNKNSADVKGCTMYVALFPCNECAKLIIQAG 114
Score = 60.5 bits (145), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 25/35 (71%), Positives = 31/35 (88%)
Query: 1 MNAILNKNSADTKRCKLYTSLFPCNECAKVIIQSG 35
+NAI+NKNSAD K C +Y +LFPCNECAK+IIQ+G
Sbjct: 80 LNAIMNKNSADVKGCTMYVALFPCNECAKLIIQAG 114
>gi|312080683|ref|XP_003142705.1| dCMP deaminase [Loa loa]
gi|307762130|gb|EFO21364.1| dCMP deaminase [Loa loa]
Length = 206
Score = 158 bits (399), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 73/122 (59%), Positives = 89/122 (72%), Gaps = 5/122 (4%)
Query: 86 DDVLEWHEYFMASAFLVAKRSKDPVTRVGAVIVNEDNKIVGTGYNGMPIGCSDDEFPWDK 145
+D L W EYFM A + A RSKDPVT+VGAVIVN+D +IVG+GYNGMP GCSDD PW K
Sbjct: 41 NDYLSWEEYFMGVAHMAALRSKDPVTQVGAVIVNQDKRIVGSGYNGMPTGCSDDILPWSK 100
Query: 146 NTHDELD-----MCHAEMNAILNKNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIYMC 200
+ + L+ +CHAEMNAILNK K +YT LFPCNECAK+IIQ+GI EV++
Sbjct: 101 GSENFLENKSAYVCHAEMNAILNKIVGSIKGSTIYTVLFPCNECAKLIIQAGISEVVFQR 160
Query: 201 DK 202
+K
Sbjct: 161 EK 162
Score = 79.0 bits (193), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 41/66 (62%), Positives = 47/66 (71%), Gaps = 1/66 (1%)
Query: 1 MNAILNKNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIYMCDKHKQKPATIASKRMFD 60
MNAILNK K +YT LFPCNECAK+IIQ+GI EV++ +K K K TIASKRMFD
Sbjct: 118 MNAILNKIVGSIKGSTIYTVLFPCNECAKLIIQAGISEVVFQREKPK-KVNTIASKRMFD 176
Query: 61 AAKVHY 66
A V Y
Sbjct: 177 MAGVRY 182
>gi|359321528|ref|XP_849027.2| PREDICTED: deoxycytidylate deaminase isoform 1 [Canis lupus
familiaris]
Length = 170
Score = 158 bits (399), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 73/112 (65%), Positives = 89/112 (79%), Gaps = 5/112 (4%)
Query: 96 MASAFLVAKRSKDPVTRVGAVIVNEDNKIVGTGYNGMPIGCSDDEFPWDKNTHDELD--- 152
+A AFL A+RSKDP ++VGA IVN +NKIVG GYNGMP GCSDD PW++ +LD
Sbjct: 12 LAVAFLAAQRSKDPNSQVGACIVNAENKIVGIGYNGMPNGCSDDHLPWERTAASKLDTKY 71
Query: 153 --MCHAEMNAILNKNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIYMCDK 202
+CHAE+NAI+NKNSAD K C +Y +LFPCNECAK+IIQ+GIKEVI+M DK
Sbjct: 72 PYVCHAELNAIMNKNSADVKGCTMYVALFPCNECAKLIIQAGIKEVIFMSDK 123
Score = 85.5 bits (210), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 38/66 (57%), Positives = 50/66 (75%)
Query: 1 MNAILNKNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIYMCDKHKQKPATIASKRMFD 60
+NAI+NKNSAD K C +Y +LFPCNECAK+IIQ+GIKEVI+M DK+ A++ +FD
Sbjct: 79 LNAIMNKNSADVKGCTMYVALFPCNECAKLIIQAGIKEVIFMSDKYHDSDEMTAARLLFD 138
Query: 61 AAKVHY 66
A V +
Sbjct: 139 MAGVAF 144
>gi|300122215|emb|CBK22788.2| unnamed protein product [Blastocystis hominis]
Length = 288
Score = 157 bits (398), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 77/125 (61%), Positives = 90/125 (72%), Gaps = 5/125 (4%)
Query: 83 KRVDDVLEWHEYFMASAFLVAKRSKDPVTRVGAVIVNEDNKIVGTGYNGMPIGCSDDEFP 142
K+ DD + W EYFM A L A RSKDP T+VGA IVN N+IVG GYNG P GCSDD P
Sbjct: 118 KKRDDYISWDEYFMGLACLSAMRSKDPNTQVGACIVNAYNQIVGIGYNGFPRGCSDDVLP 177
Query: 143 WDKNTHDELD-----MCHAEMNAILNKNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVI 197
W + +ELD +CHAEMNAILN N+A+ + CK+Y SLFPCN C K+IIQSGI EVI
Sbjct: 178 WSREGDNELDTKYMYVCHAEMNAILNINTANARGCKMYVSLFPCNNCCKMIIQSGIVEVI 237
Query: 198 YMCDK 202
Y+ DK
Sbjct: 238 YLRDK 242
Score = 86.7 bits (213), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 40/66 (60%), Positives = 50/66 (75%)
Query: 1 MNAILNKNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIYMCDKHKQKPATIASKRMFD 60
MNAILN N+A+ + CK+Y SLFPCN C K+IIQSGI EVIY+ DK+ ++AS+RMFD
Sbjct: 198 MNAILNINTANARGCKMYVSLFPCNNCCKMIIQSGIVEVIYLRDKYYDSNMSVASRRMFD 257
Query: 61 AAKVHY 66
A V Y
Sbjct: 258 MAGVKY 263
>gi|406894487|gb|EKD39289.1| hypothetical protein ACD_75C00450G0004 [uncultured bacterium]
Length = 165
Score = 157 bits (397), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 73/119 (61%), Positives = 87/119 (73%), Gaps = 6/119 (5%)
Query: 89 LEWHEYFMASAFLVAKRSKDPVTRVGAVIVNEDNKIVGTGYNGMPIGCSDDEFPWDKNTH 148
L W EYFMA A L A+RSKDP T+VGA + NE NKIVG GYNG P GCSDDE PW++
Sbjct: 7 LSWDEYFMAVALLSAQRSKDPNTQVGACVANEQNKIVGVGYNGFPWGCSDDELPWERQGK 66
Query: 149 DELD-----MCHAEMNAILNKNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIYMCDK 202
LD +CHAE+NA+LN S D + C++Y LFPCNEC KVIIQ+GIKE+IY+ DK
Sbjct: 67 -YLDTKYPYVCHAELNAVLNSISMDLRNCRIYVGLFPCNECTKVIIQAGIKEIIYLSDK 124
Score = 73.2 bits (178), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 32/60 (53%), Positives = 42/60 (70%)
Query: 1 MNAILNKNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIYMCDKHKQKPATIASKRMFD 60
+NA+LN S D + C++Y LFPCNEC KVIIQ+GIKE+IY+ DK+ A+K M D
Sbjct: 80 LNAVLNSISMDLRNCRIYVGLFPCNECTKVIIQAGIKEIIYLSDKYSGTDQIKAAKIMLD 139
>gi|256072191|ref|XP_002572420.1| deoxycytidylate deaminase [Schistosoma mansoni]
gi|353230192|emb|CCD76363.1| putative deoxycytidylate deaminase [Schistosoma mansoni]
Length = 175
Score = 157 bits (397), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 72/131 (54%), Positives = 97/131 (74%), Gaps = 5/131 (3%)
Query: 78 NGSPHKRVDDVLEWHEYFMASAFLVAKRSKDPVTRVGAVIVNEDNKIVGTGYNGMPIGCS 137
N + +++ + + W EYFM+ A L A RSKDP T+VGA IVN++ KIVG GYNGMP G
Sbjct: 10 NLNGNQKRSNYISWDEYFMSIALLSAMRSKDPSTQVGACIVNQEKKIVGIGYNGMPNGIL 69
Query: 138 DDEFPWDKNTHDELD-----MCHAEMNAILNKNSADTKRCKLYTSLFPCNECAKVIIQSG 192
DD+ PW K + +EL+ +CHAE+NA+LN+N A + C L+T++FPCNECAKVIIQ+G
Sbjct: 70 DDDVPWGKGSANELENKYLYVCHAELNAVLNRNEAHSGGCTLFTTMFPCNECAKVIIQAG 129
Query: 193 IKEVIYMCDKQ 203
IKEV+Y DK+
Sbjct: 130 IKEVVYYSDKK 140
Score = 77.8 bits (190), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 34/64 (53%), Positives = 47/64 (73%)
Query: 1 MNAILNKNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIYMCDKHKQKPATIASKRMFD 60
+NA+LN+N A + C L+T++FPCNECAKVIIQ+GIKEV+Y DK + A+K +F+
Sbjct: 95 LNAVLNRNEAHSGGCTLFTTMFPCNECAKVIIQAGIKEVVYYSDKKNGTESNQAAKYLFN 154
Query: 61 AAKV 64
A V
Sbjct: 155 KADV 158
>gi|197302162|ref|ZP_03167221.1| hypothetical protein RUMLAC_00888 [Ruminococcus lactaris ATCC
29176]
gi|197298593|gb|EDY33134.1| cytidine and deoxycytidylate deaminase zinc-binding region
[Ruminococcus lactaris ATCC 29176]
Length = 164
Score = 157 bits (396), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 75/121 (61%), Positives = 84/121 (69%), Gaps = 5/121 (4%)
Query: 87 DVLEWHEYFMASAFLVAKRSKDPVTRVGAVIVNEDNKIVGTGYNGMPIGCSDDEFPWDKN 146
D L W EYFM A L RSKDP T+VG IV++DNKI+ GYNG+PIGCSDDEFPW +
Sbjct: 9 DYLSWDEYFMGVAMLSGMRSKDPNTQVGCCIVSQDNKILSMGYNGLPIGCSDDEFPWARE 68
Query: 147 THDELD-----MCHAEMNAILNKNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIYMCD 201
D LD H+E+NAILN + KLY SLFPCNECAK IIQSGIKEVIY CD
Sbjct: 69 GEDPLDTKYVYTTHSELNAILNYSGGSLAGAKLYVSLFPCNECAKAIIQSGIKEVIYDCD 128
Query: 202 K 202
K
Sbjct: 129 K 129
Score = 92.4 bits (228), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 44/66 (66%), Positives = 48/66 (72%)
Query: 1 MNAILNKNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIYMCDKHKQKPATIASKRMFD 60
+NAILN + KLY SLFPCNECAK IIQSGIKEVIY CDK+ PA +ASKRM D
Sbjct: 85 LNAILNYSGGSLAGAKLYVSLFPCNECAKAIIQSGIKEVIYDCDKYAHTPAVMASKRMMD 144
Query: 61 AAKVHY 66
AA V Y
Sbjct: 145 AAGVRY 150
>gi|170584686|ref|XP_001897125.1| dCMP deaminase [Brugia malayi]
gi|158595455|gb|EDP34008.1| dCMP deaminase, putative [Brugia malayi]
Length = 205
Score = 156 bits (395), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 71/123 (57%), Positives = 90/123 (73%), Gaps = 5/123 (4%)
Query: 86 DDVLEWHEYFMASAFLVAKRSKDPVTRVGAVIVNEDNKIVGTGYNGMPIGCSDDEFPWDK 145
+D L W EYFM A + A RSKDP+T+VGAVIVN+D +IVG+GYNGMP GCSDD PW K
Sbjct: 40 NDYLSWEEYFMGVAHMAALRSKDPITQVGAVIVNQDKRIVGSGYNGMPTGCSDDVLPWGK 99
Query: 146 NTHDELD-----MCHAEMNAILNKNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIYMC 200
+ + L+ +CHAE+NAILNK K +YT LFPCNECAK+IIQ+GI EV++
Sbjct: 100 DPENFLENKSAYVCHAELNAILNKIVGSIKGSTIYTVLFPCNECAKLIIQAGISEVVFQR 159
Query: 201 DKQ 203
+K+
Sbjct: 160 EKE 162
Score = 79.0 bits (193), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 40/66 (60%), Positives = 47/66 (71%), Gaps = 1/66 (1%)
Query: 1 MNAILNKNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIYMCDKHKQKPATIASKRMFD 60
+NAILNK K +YT LFPCNECAK+IIQ+GI EV++ +K K K TIASKRMFD
Sbjct: 117 LNAILNKIVGSIKGSTIYTVLFPCNECAKLIIQAGISEVVFQREKEK-KVNTIASKRMFD 175
Query: 61 AAKVHY 66
A V Y
Sbjct: 176 LAGVRY 181
>gi|336425990|ref|ZP_08606004.1| hypothetical protein HMPREF0994_02010 [Lachnospiraceae bacterium
3_1_57FAA_CT1]
gi|336011455|gb|EGN41415.1| hypothetical protein HMPREF0994_02010 [Lachnospiraceae bacterium
3_1_57FAA_CT1]
Length = 159
Score = 156 bits (394), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 75/120 (62%), Positives = 84/120 (70%), Gaps = 4/120 (3%)
Query: 87 DVLEWHEYFMASAFLVAKRSKDPVTRVGAVIVNEDNKIVGTGYNGMPIGCSDDEFPWDKN 146
D + W EYFM A L RSKDP T+VGA IV++DNKI+ GYNG PIGCSDDEFPWDK
Sbjct: 5 DYITWDEYFMGVAKLSGMRSKDPSTQVGACIVSQDNKILSMGYNGFPIGCSDDEFPWDKK 64
Query: 147 THDELD----MCHAEMNAILNKNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIYMCDK 202
+E + H+E+NAILN KLY SLFPCNECAK IIQSGIKEVIY CDK
Sbjct: 65 GEEEDTKYPYVTHSELNAILNYRGGSLAGAKLYVSLFPCNECAKAIIQSGIKEVIYECDK 124
Score = 90.5 bits (223), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 44/66 (66%), Positives = 46/66 (69%)
Query: 1 MNAILNKNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIYMCDKHKQKPATIASKRMFD 60
+NAILN KLY SLFPCNECAK IIQSGIKEVIY CDK+ PA ASKRM D
Sbjct: 80 LNAILNYRGGSLAGAKLYVSLFPCNECAKAIIQSGIKEVIYECDKYADTPAVRASKRMLD 139
Query: 61 AAKVHY 66
AA V Y
Sbjct: 140 AAGVVY 145
>gi|51246123|ref|YP_066007.1| deoxycytidylate deaminase [Desulfotalea psychrophila LSv54]
gi|50877160|emb|CAG37000.1| probable deoxycytidylate deaminase [Desulfotalea psychrophila
LSv54]
Length = 165
Score = 155 bits (393), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 74/119 (62%), Positives = 88/119 (73%), Gaps = 6/119 (5%)
Query: 89 LEWHEYFMASAFLVAKRSKDPVTRVGAVIVNEDNKIVGTGYNGMPIGCSDDEFPWDKNTH 148
L W EYFMA A L A+RSKDP T+VGA I N+ NKIVG GYNG P+GC DD+ PW +
Sbjct: 7 LSWDEYFMAVAILSAQRSKDPSTQVGACIANKANKIVGVGYNGFPLGCDDDDLPWGRE-G 65
Query: 149 DELD-----MCHAEMNAILNKNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIYMCDK 202
D L+ +CHAE+NA+LN +S D CK+Y +LFPCNEC KVIIQSGIKEVIY+ DK
Sbjct: 66 DFLETKYPYVCHAELNAVLNSSSRDLMDCKIYVALFPCNECTKVIIQSGIKEVIYLSDK 124
Score = 82.4 bits (202), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 38/64 (59%), Positives = 48/64 (75%)
Query: 1 MNAILNKNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIYMCDKHKQKPATIASKRMFD 60
+NA+LN +S D CK+Y +LFPCNEC KVIIQSGIKEVIY+ DK+K ASK+MF+
Sbjct: 80 LNAVLNSSSRDLMDCKIYVALFPCNECTKVIIQSGIKEVIYLSDKYKDTDQVRASKKMFN 139
Query: 61 AAKV 64
+ V
Sbjct: 140 MSGV 143
>gi|340758349|ref|ZP_08694938.1| deoxycytidylate deaminase [Fusobacterium varium ATCC 27725]
gi|251835263|gb|EES63806.1| deoxycytidylate deaminase [Fusobacterium varium ATCC 27725]
Length = 163
Score = 155 bits (392), Expect = 9e-36, Method: Compositional matrix adjust.
Identities = 73/122 (59%), Positives = 94/122 (77%), Gaps = 7/122 (5%)
Query: 86 DDVLEWHEYFMASAFLVAKRSKDPVTRVGAVIVNEDNKIVGTGYNGMPIGCSDDEFPWDK 145
+D +EW EYFM A L AKRSKDP T+VGA IVNE+ +I+G GYNG+P GCSDDEFPW++
Sbjct: 4 EDYIEWDEYFMGVALLSAKRSKDPNTQVGACIVNEERRIIGVGYNGLPKGCSDDEFPWER 63
Query: 146 NTHDELD-----MCHAEMNAILNKNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIYMC 200
+ + LD +CHAE+NAILN ++ K C LY +LFPC+EC+K IIQSGIKE++Y+
Sbjct: 64 DG-EFLDTKYPFVCHAELNAILN-STKTLKNCTLYVALFPCHECSKAIIQSGIKELVYLS 121
Query: 201 DK 202
DK
Sbjct: 122 DK 123
Score = 77.0 bits (188), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 37/66 (56%), Positives = 49/66 (74%), Gaps = 1/66 (1%)
Query: 1 MNAILNKNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIYMCDKHKQKPATIASKRMFD 60
+NAILN ++ K C LY +LFPC+EC+K IIQSGIKE++Y+ DK+ + +ASKRM D
Sbjct: 80 LNAILN-STKTLKNCTLYVALFPCHECSKAIIQSGIKELVYLSDKYCGTKSDMASKRMLD 138
Query: 61 AAKVHY 66
AA V Y
Sbjct: 139 AAGVKY 144
>gi|325264269|ref|ZP_08131000.1| putative deoxycytidylate deaminase [Clostridium sp. D5]
gi|324030340|gb|EGB91624.1| putative deoxycytidylate deaminase [Clostridium sp. D5]
Length = 162
Score = 155 bits (392), Expect = 9e-36, Method: Compositional matrix adjust.
Identities = 78/127 (61%), Positives = 85/127 (66%), Gaps = 6/127 (4%)
Query: 81 PHKRVDDVLEWHEYFMASAFLVAKRSKDPVTRVGAVIVNEDNKIVGTGYNGMPIGCSDDE 140
P KR D L W EYFM A L RSKDP T+VG IV+ DNKI+ GYNG PIGCSDDE
Sbjct: 2 PDKR-KDYLSWDEYFMGVAMLSGMRSKDPNTQVGCCIVSPDNKILSMGYNGFPIGCSDDE 60
Query: 141 FPWDKNTHDELDM-----CHAEMNAILNKNSADTKRCKLYTSLFPCNECAKVIIQSGIKE 195
FPW + D L+ H+E+NAILN N KLY SLFPCNECAK IIQSGIKE
Sbjct: 61 FPWAREGDDPLETKYVYSTHSELNAILNYNGGSLAGAKLYVSLFPCNECAKAIIQSGIKE 120
Query: 196 VIYMCDK 202
VIY CDK
Sbjct: 121 VIYDCDK 127
Score = 94.4 bits (233), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 45/66 (68%), Positives = 48/66 (72%)
Query: 1 MNAILNKNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIYMCDKHKQKPATIASKRMFD 60
+NAILN N KLY SLFPCNECAK IIQSGIKEVIY CDK+ PA +ASKRM D
Sbjct: 83 LNAILNYNGGSLAGAKLYVSLFPCNECAKAIIQSGIKEVIYDCDKYADTPAVLASKRMMD 142
Query: 61 AAKVHY 66
AA V Y
Sbjct: 143 AAGVRY 148
>gi|373498426|ref|ZP_09588937.1| hypothetical protein HMPREF0402_02810 [Fusobacterium sp. 12_1B]
gi|404368345|ref|ZP_10973698.1| hypothetical protein FUAG_02413 [Fusobacterium ulcerans ATCC 49185]
gi|313690063|gb|EFS26898.1| hypothetical protein FUAG_02413 [Fusobacterium ulcerans ATCC 49185]
gi|371961443|gb|EHO79069.1| hypothetical protein HMPREF0402_02810 [Fusobacterium sp. 12_1B]
Length = 163
Score = 155 bits (392), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 73/122 (59%), Positives = 93/122 (76%), Gaps = 7/122 (5%)
Query: 86 DDVLEWHEYFMASAFLVAKRSKDPVTRVGAVIVNEDNKIVGTGYNGMPIGCSDDEFPWDK 145
+D +EW EYFM A L AKRSKDP T+VGA IVNE+ +I+G GYNG+P GCSDDEFPW++
Sbjct: 4 EDYIEWDEYFMGVALLSAKRSKDPNTQVGACIVNEERRIIGVGYNGLPKGCSDDEFPWER 63
Query: 146 NTHDELD-----MCHAEMNAILNKNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIYMC 200
+ LD +CHAE+NAILN ++ K C LY +LFPC+EC+K IIQSGIKE++Y+
Sbjct: 64 EG-EFLDTKYPFVCHAELNAILN-STKTLKNCTLYVALFPCHECSKAIIQSGIKELVYLS 121
Query: 201 DK 202
DK
Sbjct: 122 DK 123
Score = 77.0 bits (188), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 37/66 (56%), Positives = 49/66 (74%), Gaps = 1/66 (1%)
Query: 1 MNAILNKNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIYMCDKHKQKPATIASKRMFD 60
+NAILN ++ K C LY +LFPC+EC+K IIQSGIKE++Y+ DK+ + +ASKRM D
Sbjct: 80 LNAILN-STKTLKNCTLYVALFPCHECSKAIIQSGIKELVYLSDKYCGTKSDMASKRMLD 138
Query: 61 AAKVHY 66
AA V Y
Sbjct: 139 AAGVKY 144
>gi|291548625|emb|CBL24887.1| Deoxycytidylate deaminase [Ruminococcus torques L2-14]
Length = 162
Score = 154 bits (390), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 73/121 (60%), Positives = 84/121 (69%), Gaps = 5/121 (4%)
Query: 87 DVLEWHEYFMASAFLVAKRSKDPVTRVGAVIVNEDNKIVGTGYNGMPIGCSDDEFPWDKN 146
D L W EYFM A L RSKDP T+VG IV++DNKI+ GYNG+P+GCSDDEFPW +
Sbjct: 7 DYLSWDEYFMGVAMLSGMRSKDPNTQVGCCIVSQDNKILSMGYNGLPMGCSDDEFPWARE 66
Query: 147 THDELD-----MCHAEMNAILNKNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIYMCD 201
D L+ H+E+NAILN N KLY SLFPCNECAK IIQ+GIKEVIY CD
Sbjct: 67 GEDPLETKYVYTTHSELNAILNYNGGSLAGAKLYVSLFPCNECAKAIIQAGIKEVIYDCD 126
Query: 202 K 202
K
Sbjct: 127 K 127
Score = 87.0 bits (214), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 42/66 (63%), Positives = 45/66 (68%)
Query: 1 MNAILNKNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIYMCDKHKQKPATIASKRMFD 60
+NAILN N KLY SLFPCNECAK IIQ+GIKEVIY CDK+ ASKRM D
Sbjct: 83 LNAILNYNGGSLAGAKLYVSLFPCNECAKAIIQAGIKEVIYDCDKYADTAGVKASKRMMD 142
Query: 61 AAKVHY 66
AA V Y
Sbjct: 143 AAGVRY 148
>gi|210614123|ref|ZP_03290059.1| hypothetical protein CLONEX_02272 [Clostridium nexile DSM 1787]
gi|210150824|gb|EEA81832.1| hypothetical protein CLONEX_02272 [Clostridium nexile DSM 1787]
Length = 162
Score = 154 bits (389), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 72/121 (59%), Positives = 84/121 (69%), Gaps = 5/121 (4%)
Query: 87 DVLEWHEYFMASAFLVAKRSKDPVTRVGAVIVNEDNKIVGTGYNGMPIGCSDDEFPWDKN 146
D + W EYFM A L RSKDP T+VG IV++DNKI+ GYNG PIGCSDDEFPW++
Sbjct: 7 DYISWDEYFMGVAMLSGMRSKDPSTQVGCCIVSQDNKILSMGYNGFPIGCSDDEFPWERE 66
Query: 147 THDELDM-----CHAEMNAILNKNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIYMCD 201
D L+ H+E+NAILN + KLY SLFPCNECAK IIQSGI+EVIY CD
Sbjct: 67 GDDPLETKYLYSTHSELNAILNYSGGSLAGAKLYVSLFPCNECAKAIIQSGIREVIYDCD 126
Query: 202 K 202
K
Sbjct: 127 K 127
Score = 92.8 bits (229), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 43/67 (64%), Positives = 49/67 (73%)
Query: 1 MNAILNKNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIYMCDKHKQKPATIASKRMFD 60
+NAILN + KLY SLFPCNECAK IIQSGI+EVIY CDK+ P+ IASKRM D
Sbjct: 83 LNAILNYSGGSLAGAKLYVSLFPCNECAKAIIQSGIREVIYDCDKYADTPSVIASKRMMD 142
Query: 61 AAKVHYW 67
AA V Y+
Sbjct: 143 AAGVRYY 149
>gi|317054801|ref|YP_004103268.1| dCMP deaminase [Ruminococcus albus 7]
gi|315447070|gb|ADU20634.1| dCMP deaminase [Ruminococcus albus 7]
Length = 159
Score = 154 bits (389), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 74/121 (61%), Positives = 91/121 (75%), Gaps = 6/121 (4%)
Query: 87 DVLEWHEYFMASAFLVAKRSKDPVTRVGAVIVNEDNKIVGTGYNGMPIGCSDDEFPWDKN 146
D L W EYFM A L AKRSKDP T+VGA IV+E+NKI+ GYNGMP GC+DD+ PW+++
Sbjct: 5 DYLSWDEYFMGIAHLSAKRSKDPSTQVGACIVSEENKILSVGYNGMPTGCNDDDMPWERD 64
Query: 147 THDELD-----MCHAEMNAILNKNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIYMCD 201
D L+ +CHAE+NAILN+++ K ++Y SLFPCNECAK IIQSGIKEVIY D
Sbjct: 65 G-DFLETKYPFVCHAELNAILNRSTGSLKNARIYVSLFPCNECAKAIIQSGIKEVIYGDD 123
Query: 202 K 202
K
Sbjct: 124 K 124
Score = 79.0 bits (193), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 37/64 (57%), Positives = 46/64 (71%)
Query: 1 MNAILNKNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIYMCDKHKQKPATIASKRMFD 60
+NAILN+++ K ++Y SLFPCNECAK IIQSGIKEVIY DK+ ASK+MF+
Sbjct: 80 LNAILNRSTGSLKNARIYVSLFPCNECAKAIIQSGIKEVIYGDDKYADTDGVRASKKMFN 139
Query: 61 AAKV 64
A V
Sbjct: 140 MAGV 143
>gi|168207992|ref|ZP_02633997.1| cytidine/deoxycytidylate deaminase family protein [Clostridium
perfringens E str. JGS1987]
gi|168210758|ref|ZP_02636383.1| cytidine/deoxycytidylate deaminase family protein [Clostridium
perfringens B str. ATCC 3626]
gi|168217464|ref|ZP_02643089.1| cytidine/deoxycytidylate deaminase family protein [Clostridium
perfringens NCTC 8239]
gi|169342382|ref|ZP_02863448.1| cytidine/deoxycytidylate deaminase family protein [Clostridium
perfringens C str. JGS1495]
gi|182626202|ref|ZP_02953960.1| cytidine/deoxycytidylate deaminase family protein [Clostridium
perfringens D str. JGS1721]
gi|422345770|ref|ZP_16426684.1| hypothetical protein HMPREF9476_00757 [Clostridium perfringens
WAL-14572]
gi|422873966|ref|ZP_16920451.1| cytidine/deoxycytidylate deaminase family protein [Clostridium
perfringens F262]
gi|169299502|gb|EDS81566.1| cytidine/deoxycytidylate deaminase family protein [Clostridium
perfringens C str. JGS1495]
gi|170660714|gb|EDT13397.1| cytidine/deoxycytidylate deaminase family protein [Clostridium
perfringens E str. JGS1987]
gi|170711173|gb|EDT23355.1| cytidine/deoxycytidylate deaminase family protein [Clostridium
perfringens B str. ATCC 3626]
gi|177908466|gb|EDT70999.1| cytidine/deoxycytidylate deaminase family protein [Clostridium
perfringens D str. JGS1721]
gi|182380416|gb|EDT77895.1| cytidine/deoxycytidylate deaminase family protein [Clostridium
perfringens NCTC 8239]
gi|373227435|gb|EHP49749.1| hypothetical protein HMPREF9476_00757 [Clostridium perfringens
WAL-14572]
gi|380304961|gb|EIA17244.1| cytidine/deoxycytidylate deaminase family protein [Clostridium
perfringens F262]
Length = 166
Score = 154 bits (388), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 73/122 (59%), Positives = 87/122 (71%), Gaps = 6/122 (4%)
Query: 86 DDVLEWHEYFMASAFLVAKRSKDPVTRVGAVIVNEDNKIVGTGYNGMPIGCSDDEFPWDK 145
+D + W EYFM A + AKRSKDP T+VGA IV+ DNKIVG GYNG P GCSDD+ PW
Sbjct: 6 EDYISWDEYFMGVALISAKRSKDPNTQVGACIVDNDNKIVGIGYNGFPKGCSDDDLPW-G 64
Query: 146 NTHDELDM-----CHAEMNAILNKNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIYMC 200
N D L+ CHAE+NAILN + K C++Y +LFPCNECAK IIQ+GI EVIY+
Sbjct: 65 NKGDFLETKYPYACHAELNAILNSTGKNVKNCRVYATLFPCNECAKAIIQAGITEVIYLS 124
Query: 201 DK 202
DK
Sbjct: 125 DK 126
Score = 82.4 bits (202), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 38/66 (57%), Positives = 46/66 (69%)
Query: 1 MNAILNKNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIYMCDKHKQKPATIASKRMFD 60
+NAILN + K C++Y +LFPCNECAK IIQ+GI EVIY+ DK+K ASK MFD
Sbjct: 82 LNAILNSTGKNVKNCRVYATLFPCNECAKAIIQAGITEVIYLSDKYKDTDIVKASKFMFD 141
Query: 61 AAKVHY 66
A V Y
Sbjct: 142 KANVKY 147
>gi|110801187|ref|YP_695768.1| cytidine/deoxycytidylate deaminase [Clostridium perfringens ATCC
13124]
gi|168215286|ref|ZP_02640911.1| cytidine/deoxycytidylate deaminase family protein [Clostridium
perfringens CPE str. F4969]
gi|110675834|gb|ABG84821.1| cytidine/deoxycytidylate deaminase family protein [Clostridium
perfringens ATCC 13124]
gi|170713327|gb|EDT25509.1| cytidine/deoxycytidylate deaminase family protein [Clostridium
perfringens CPE str. F4969]
Length = 166
Score = 154 bits (388), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 73/122 (59%), Positives = 87/122 (71%), Gaps = 6/122 (4%)
Query: 86 DDVLEWHEYFMASAFLVAKRSKDPVTRVGAVIVNEDNKIVGTGYNGMPIGCSDDEFPWDK 145
+D + W EYFM A + AKRSKDP T+VGA IV+ DNKIVG GYNG P GCSDD+ PW
Sbjct: 6 EDYISWDEYFMGVALISAKRSKDPNTQVGACIVDNDNKIVGIGYNGFPKGCSDDDLPW-G 64
Query: 146 NTHDELDM-----CHAEMNAILNKNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIYMC 200
N D L+ CHAE+NAILN + K C++Y +LFPCNECAK IIQ+GI EVIY+
Sbjct: 65 NKGDFLETKYPYACHAELNAILNSTGKNVKNCRVYATLFPCNECAKAIIQAGITEVIYLS 124
Query: 201 DK 202
DK
Sbjct: 125 DK 126
Score = 82.4 bits (202), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 38/66 (57%), Positives = 46/66 (69%)
Query: 1 MNAILNKNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIYMCDKHKQKPATIASKRMFD 60
+NAILN + K C++Y +LFPCNECAK IIQ+GI EVIY+ DK+K ASK MFD
Sbjct: 82 LNAILNSTGKNVKNCRVYATLFPCNECAKAIIQAGITEVIYLSDKYKDTDIVKASKFMFD 141
Query: 61 AAKVHY 66
A V Y
Sbjct: 142 KANVKY 147
>gi|18310048|ref|NP_561982.1| cytidine/deoxycytidylate deaminase [Clostridium perfringens str.
13]
gi|18144727|dbj|BAB80772.1| deoxycytidylate deaminase [Clostridium perfringens str. 13]
Length = 166
Score = 153 bits (387), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 73/122 (59%), Positives = 87/122 (71%), Gaps = 6/122 (4%)
Query: 86 DDVLEWHEYFMASAFLVAKRSKDPVTRVGAVIVNEDNKIVGTGYNGMPIGCSDDEFPWDK 145
+D + W EYFM A + AKRSKDP T+VGA IV+ DNKIVG GYNG P GCSDD+ PW
Sbjct: 6 EDYISWDEYFMGVALISAKRSKDPNTQVGACIVDNDNKIVGIGYNGFPKGCSDDDLPW-G 64
Query: 146 NTHDELDM-----CHAEMNAILNKNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIYMC 200
N D L+ CHAE+NAILN + K C++Y +LFPCNECAK IIQ+GI EVIY+
Sbjct: 65 NKGDFLETKYPYACHAELNAILNSTGKNVKNCRVYATLFPCNECAKAIIQAGITEVIYLS 124
Query: 201 DK 202
DK
Sbjct: 125 DK 126
Score = 82.4 bits (202), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 38/66 (57%), Positives = 46/66 (69%)
Query: 1 MNAILNKNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIYMCDKHKQKPATIASKRMFD 60
+NAILN + K C++Y +LFPCNECAK IIQ+GI EVIY+ DK+K ASK MFD
Sbjct: 82 LNAILNSTGKNVKNCRVYATLFPCNECAKAIIQAGITEVIYLSDKYKDTDIVKASKFMFD 141
Query: 61 AAKVHY 66
A V Y
Sbjct: 142 KANVKY 147
>gi|225570086|ref|ZP_03779111.1| hypothetical protein CLOHYLEM_06182 [Clostridium hylemonae DSM
15053]
gi|225161556|gb|EEG74175.1| hypothetical protein CLOHYLEM_06182 [Clostridium hylemonae DSM
15053]
Length = 162
Score = 153 bits (387), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 72/121 (59%), Positives = 85/121 (70%), Gaps = 5/121 (4%)
Query: 87 DVLEWHEYFMASAFLVAKRSKDPVTRVGAVIVNEDNKIVGTGYNGMPIGCSDDEFPWDKN 146
D + W EYFM A L RSKDP T+VG IV++DNKI+ GYNG+PIGCSDDEFPWD+
Sbjct: 7 DYISWDEYFMGVAMLSGMRSKDPNTQVGCCIVSQDNKILSMGYNGLPIGCSDDEFPWDRE 66
Query: 147 THDELD-----MCHAEMNAILNKNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIYMCD 201
D L+ H+E+NAILN + KLY SLFPCNECAK IIQSGIKEVI+ C+
Sbjct: 67 GEDPLETKYVYTVHSELNAILNYRGGSLEGAKLYVSLFPCNECAKAIIQSGIKEVIFDCN 126
Query: 202 K 202
K
Sbjct: 127 K 127
Score = 85.1 bits (209), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 41/66 (62%), Positives = 47/66 (71%)
Query: 1 MNAILNKNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIYMCDKHKQKPATIASKRMFD 60
+NAILN + KLY SLFPCNECAK IIQSGIKEVI+ C+K++ A AS RMFD
Sbjct: 83 LNAILNYRGGSLEGAKLYVSLFPCNECAKAIIQSGIKEVIFDCNKYEDTAAVKASMRMFD 142
Query: 61 AAKVHY 66
AA V Y
Sbjct: 143 AAGVRY 148
>gi|320353575|ref|YP_004194914.1| dCMP deaminase [Desulfobulbus propionicus DSM 2032]
gi|320122077|gb|ADW17623.1| dCMP deaminase [Desulfobulbus propionicus DSM 2032]
Length = 164
Score = 153 bits (386), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 71/121 (58%), Positives = 85/121 (70%), Gaps = 6/121 (4%)
Query: 87 DVLEWHEYFMASAFLVAKRSKDPVTRVGAVIVNEDNKIVGTGYNGMPIGCSDDEFPWDKN 146
D L W EYFMA A L RSKDP T+VGA + N NKIVG GYNG P GCSDDE PW +
Sbjct: 7 DYLSWDEYFMAVAILSGHRSKDPNTQVGACVANSQNKIVGVGYNGFPWGCSDDELPWSRE 66
Query: 147 THDELD-----MCHAEMNAILNKNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIYMCD 201
LD +CHAE+NA+LN + D + C+LY +LFPCNEC KVIIQ+GI+E+IY+ D
Sbjct: 67 -GSYLDTKYPYVCHAELNAVLNSITYDLRDCRLYVALFPCNECTKVIIQAGIREIIYLSD 125
Query: 202 K 202
K
Sbjct: 126 K 126
Score = 82.0 bits (201), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 34/66 (51%), Positives = 49/66 (74%)
Query: 1 MNAILNKNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIYMCDKHKQKPATIASKRMFD 60
+NA+LN + D + C+LY +LFPCNEC KVIIQ+GI+E+IY+ DK+K+ + +ASK M D
Sbjct: 82 LNAVLNSITYDLRDCRLYVALFPCNECTKVIIQAGIREIIYLSDKYKESDSVLASKIMLD 141
Query: 61 AAKVHY 66
+ Y
Sbjct: 142 KSNTTY 147
>gi|374315790|ref|YP_005062218.1| deoxycytidylate deaminase [Sphaerochaeta pleomorpha str. Grapes]
gi|359351434|gb|AEV29208.1| deoxycytidylate deaminase [Sphaerochaeta pleomorpha str. Grapes]
Length = 160
Score = 153 bits (386), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 73/122 (59%), Positives = 89/122 (72%), Gaps = 6/122 (4%)
Query: 86 DDVLEWHEYFMASAFLVAKRSKDPVTRVGAVIVNEDNKIVGTGYNGMPIGCSDDEFPWDK 145
+D + W EYFM A L + RSKDP T+VGA IVN + KIVG GYNG PIGC+DDE PW++
Sbjct: 5 EDYISWDEYFMGVAVLSSMRSKDPHTQVGACIVNSEKKIVGVGYNGFPIGCNDDEVPWER 64
Query: 146 NTHDELD-----MCHAEMNAILNKNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIYMC 200
+ LD +CHAE+NAILN S++ K C LY LFPCNECAK IIQ+GIKEV+Y+
Sbjct: 65 EG-EWLDTKYPYVCHAELNAILNSISSNLKGCTLYVGLFPCNECAKAIIQAGIKEVVYLS 123
Query: 201 DK 202
DK
Sbjct: 124 DK 125
Score = 83.2 bits (204), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 39/66 (59%), Positives = 47/66 (71%)
Query: 1 MNAILNKNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIYMCDKHKQKPATIASKRMFD 60
+NAILN S++ K C LY LFPCNECAK IIQ+GIKEV+Y+ DK+ + T ASK MFD
Sbjct: 81 LNAILNSISSNLKGCTLYVGLFPCNECAKAIIQAGIKEVVYLSDKYAEADNTKASKWMFD 140
Query: 61 AAKVHY 66
V Y
Sbjct: 141 QTGVSY 146
>gi|195427655|ref|XP_002061892.1| GK17242 [Drosophila willistoni]
gi|194157977|gb|EDW72878.1| GK17242 [Drosophila willistoni]
Length = 203
Score = 153 bits (386), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 75/134 (55%), Positives = 91/134 (67%), Gaps = 6/134 (4%)
Query: 74 NGVQNGSPHKRVDDVLEWHEYFMASAFLVAKRSKDPVTRVGAVIVNEDNKIVGTGYNGMP 133
NG+ HK + L W +YFMA A L AKRSKDPVT+VGA IV++ N+IV GYNG P
Sbjct: 33 NGLSPKKSHKH-QNYLIWDDYFMAMALLSAKRSKDPVTQVGACIVDKQNRIVAIGYNGFP 91
Query: 134 IGCSDDEFPWDKNTHDELD-----MCHAEMNAILNKNSADTKRCKLYTSLFPCNECAKVI 188
CSDD FPW KN+ D ++ + HAE NAILN NS LYT+LFPCNEC K+I
Sbjct: 92 RNCSDDVFPWTKNSEDSMEDKKLYVVHAEANAILNSNSTSLVGTCLYTTLFPCNECTKLI 151
Query: 189 IQSGIKEVIYMCDK 202
IQSGI+ V+Y+ DK
Sbjct: 152 IQSGIQRVLYISDK 165
Score = 79.7 bits (195), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 37/65 (56%), Positives = 46/65 (70%)
Query: 2 NAILNKNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIYMCDKHKQKPATIASKRMFDA 61
NAILN NS LYT+LFPCNEC K+IIQSGI+ V+Y+ DK+ K AS+RM DA
Sbjct: 122 NAILNSNSTSLVGTCLYTTLFPCNECTKLIIQSGIQRVLYISDKYAHKAKYRASRRMLDA 181
Query: 62 AKVHY 66
A++ Y
Sbjct: 182 ARITY 186
>gi|325680467|ref|ZP_08160016.1| cytidine and deoxycytidylate deaminase zinc-binding region
[Ruminococcus albus 8]
gi|324107836|gb|EGC02103.1| cytidine and deoxycytidylate deaminase zinc-binding region
[Ruminococcus albus 8]
Length = 159
Score = 152 bits (385), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 74/121 (61%), Positives = 90/121 (74%), Gaps = 6/121 (4%)
Query: 87 DVLEWHEYFMASAFLVAKRSKDPVTRVGAVIVNEDNKIVGTGYNGMPIGCSDDEFPWDKN 146
D L W EYFM A L A+RSKDP T+VGA IV+E+NKI+ GYNGMP GC+DD+ PWD+
Sbjct: 5 DYLSWDEYFMGIAHLSARRSKDPNTQVGACIVSEENKILSVGYNGMPTGCNDDDMPWDRE 64
Query: 147 THDELD-----MCHAEMNAILNKNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIYMCD 201
+ L+ +CHAE+NAILN+++ K K+Y SLFPCNECAK IIQSGIKEVIY D
Sbjct: 65 G-EFLETKYPFVCHAELNAILNRSTGSLKNAKIYVSLFPCNECAKAIIQSGIKEVIYGDD 123
Query: 202 K 202
K
Sbjct: 124 K 124
Score = 82.8 bits (203), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 41/75 (54%), Positives = 52/75 (69%), Gaps = 2/75 (2%)
Query: 1 MNAILNKNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIYMCDKHKQKPATIASKRMFD 60
+NAILN+++ K K+Y SLFPCNECAK IIQSGIKEVIY DK+ ASKRMFD
Sbjct: 80 LNAILNRSTGSLKNAKIYVSLFPCNECAKAIIQSGIKEVIYGDDKYADTDNVRASKRMFD 139
Query: 61 AA--KVHYWSEMDKM 73
A K+ + + D++
Sbjct: 140 MAGVKIRLYKKTDRL 154
>gi|218778060|ref|YP_002429378.1| dCMP deaminase [Desulfatibacillum alkenivorans AK-01]
gi|218759444|gb|ACL01910.1| dCMP deaminase [Desulfatibacillum alkenivorans AK-01]
Length = 166
Score = 152 bits (385), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 73/121 (60%), Positives = 86/121 (71%), Gaps = 6/121 (4%)
Query: 87 DVLEWHEYFMASAFLVAKRSKDPVTRVGAVIVNEDNKIVGTGYNGMPIGCSDDEFPWDKN 146
D L W EYFM A L A+RSKDP T+VGA +VN KIVG GYNG P GCSDDE PW +
Sbjct: 7 DYLTWDEYFMGVACLSAQRSKDPNTQVGACVVNRKKKIVGIGYNGFPTGCSDDELPWARE 66
Query: 147 THDELD-----MCHAEMNAILNKNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIYMCD 201
LD +CHAE+NAILN +D + C LY +LFPCNECAK+IIQSGIKE++Y+ D
Sbjct: 67 -GGALDTKYAYVCHAELNAILNSIVSDLEGCTLYVALFPCNECAKIIIQSGIKEIVYLSD 125
Query: 202 K 202
K
Sbjct: 126 K 126
Score = 78.6 bits (192), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 35/66 (53%), Positives = 47/66 (71%)
Query: 1 MNAILNKNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIYMCDKHKQKPATIASKRMFD 60
+NAILN +D + C LY +LFPCNECAK+IIQSGIKE++Y+ DK+ + ASK M +
Sbjct: 82 LNAILNSIVSDLEGCTLYVALFPCNECAKIIIQSGIKEIVYLSDKYAETDIVRASKTMLE 141
Query: 61 AAKVHY 66
A V +
Sbjct: 142 MAGVKW 147
>gi|340751135|ref|ZP_08687961.1| deoxycytidylate deaminase [Fusobacterium mortiferum ATCC 9817]
gi|229421886|gb|EEO36933.1| deoxycytidylate deaminase [Fusobacterium mortiferum ATCC 9817]
Length = 163
Score = 152 bits (385), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 71/121 (58%), Positives = 92/121 (76%), Gaps = 7/121 (5%)
Query: 87 DVLEWHEYFMASAFLVAKRSKDPVTRVGAVIVNEDNKIVGTGYNGMPIGCSDDEFPWDKN 146
D +EW EYFM A L KRSKDP T+VGA IVNE+ KIVG GYNG+PIGCSDDE+PW++
Sbjct: 5 DYIEWDEYFMGVALLSGKRSKDPNTQVGACIVNEEKKIVGVGYNGLPIGCSDDEYPWERE 64
Query: 147 THDELD-----MCHAEMNAILNKNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIYMCD 201
+ L+ +CHAE+NAILN ++ K C +Y +LFPC+EC+K IIQSGI+E++Y+ D
Sbjct: 65 G-EFLETKYPFVCHAELNAILN-STKSLKNCTIYVALFPCHECSKAIIQSGIRELVYLSD 122
Query: 202 K 202
K
Sbjct: 123 K 123
Score = 72.0 bits (175), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 32/66 (48%), Positives = 48/66 (72%), Gaps = 1/66 (1%)
Query: 1 MNAILNKNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIYMCDKHKQKPATIASKRMFD 60
+NAILN ++ K C +Y +LFPC+EC+K IIQSGI+E++Y+ DK+ + IASK+M
Sbjct: 80 LNAILN-STKSLKNCTIYVALFPCHECSKAIIQSGIRELVYLSDKYDGTESNIASKKMLT 138
Query: 61 AAKVHY 66
+A V +
Sbjct: 139 SAGVKF 144
>gi|167525958|ref|XP_001747313.1| hypothetical protein [Monosiga brevicollis MX1]
gi|163774148|gb|EDQ87780.1| predicted protein [Monosiga brevicollis MX1]
Length = 222
Score = 152 bits (384), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 71/122 (58%), Positives = 88/122 (72%), Gaps = 5/122 (4%)
Query: 86 DDVLEWHEYFMASAFLVAKRSKDPVTRVGAVIVNEDNKIVGTGYNGMPIGCSDDEFPWDK 145
+D L W +YFMA AFL AKRSKDP T++G+ IVN NKIVG GYNGMP GC DD PW +
Sbjct: 23 EDYLPWDDYFMAVAFLSAKRSKDPNTQIGSCIVNAANKIVGIGYNGMPRGCDDDALPWAR 82
Query: 146 NTHDELD-----MCHAEMNAILNKNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIYMC 200
LD +C+AEMNAILNKNSA + C++YT+ FP +E AK+IIQ+GI EV+Y
Sbjct: 83 EGPSVLDTKYPYVCNAEMNAILNKNSASLRGCRMYTAFFPNSESAKLIIQAGITEVLYTV 142
Query: 201 DK 202
D+
Sbjct: 143 DR 144
Score = 82.0 bits (201), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 35/65 (53%), Positives = 50/65 (76%)
Query: 1 MNAILNKNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIYMCDKHKQKPATIASKRMFD 60
MNAILNKNSA + C++YT+ FP +E AK+IIQ+GI EV+Y D++ ++P A++R+F
Sbjct: 100 MNAILNKNSASLRGCRMYTAFFPNSESAKLIIQAGITEVLYTVDRYAERPEYQAARRLFA 159
Query: 61 AAKVH 65
AKVH
Sbjct: 160 LAKVH 164
>gi|153816406|ref|ZP_01969074.1| hypothetical protein RUMTOR_02659 [Ruminococcus torques ATCC 27756]
gi|317502465|ref|ZP_07960628.1| dCMP deaminase [Lachnospiraceae bacterium 8_1_57FAA]
gi|331089291|ref|ZP_08338193.1| hypothetical protein HMPREF1025_01776 [Lachnospiraceae bacterium
3_1_46FAA]
gi|336439451|ref|ZP_08619064.1| hypothetical protein HMPREF0990_01458 [Lachnospiraceae bacterium
1_1_57FAA]
gi|145846241|gb|EDK23159.1| cytidine and deoxycytidylate deaminase zinc-binding region
[Ruminococcus torques ATCC 27756]
gi|316896150|gb|EFV18258.1| dCMP deaminase [Lachnospiraceae bacterium 8_1_57FAA]
gi|330405843|gb|EGG85372.1| hypothetical protein HMPREF1025_01776 [Lachnospiraceae bacterium
3_1_46FAA]
gi|336016128|gb|EGN45923.1| hypothetical protein HMPREF0990_01458 [Lachnospiraceae bacterium
1_1_57FAA]
Length = 187
Score = 152 bits (384), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 72/121 (59%), Positives = 84/121 (69%), Gaps = 5/121 (4%)
Query: 87 DVLEWHEYFMASAFLVAKRSKDPVTRVGAVIVNEDNKIVGTGYNGMPIGCSDDEFPWDKN 146
D L W EYFM A L RSKDP T+VG IV++DNKI+ GYNG P+GCSDDEFPW ++
Sbjct: 32 DYLTWDEYFMGVAMLSGMRSKDPNTQVGCCIVSQDNKILSMGYNGFPLGCSDDEFPWVRD 91
Query: 147 THDELDM-----CHAEMNAILNKNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIYMCD 201
D L+ H+E+NAILN + KLY SLFPCNECAK IIQ+GIKEVIY CD
Sbjct: 92 GEDPLETKYVYSTHSELNAILNYSGGSLAGAKLYVSLFPCNECAKAIIQAGIKEVIYDCD 151
Query: 202 K 202
K
Sbjct: 152 K 152
Score = 91.7 bits (226), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 43/66 (65%), Positives = 48/66 (72%)
Query: 1 MNAILNKNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIYMCDKHKQKPATIASKRMFD 60
+NAILN + KLY SLFPCNECAK IIQ+GIKEVIY CDK+ P+ IASKRM D
Sbjct: 108 LNAILNYSGGSLAGAKLYVSLFPCNECAKAIIQAGIKEVIYDCDKYADTPSVIASKRMMD 167
Query: 61 AAKVHY 66
AA V Y
Sbjct: 168 AAGVRY 173
>gi|110801506|ref|YP_698456.1| cytidine/deoxycytidylate deaminase family protein [Clostridium
perfringens SM101]
gi|110682007|gb|ABG85377.1| cytidine/deoxycytidylate deaminase family protein [Clostridium
perfringens SM101]
Length = 166
Score = 152 bits (384), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 72/122 (59%), Positives = 87/122 (71%), Gaps = 6/122 (4%)
Query: 86 DDVLEWHEYFMASAFLVAKRSKDPVTRVGAVIVNEDNKIVGTGYNGMPIGCSDDEFPWDK 145
+D + W EYFM A + AKRSKDP T+VGA IV+ DNKIVG GYNG P GCSDD+ PW
Sbjct: 6 EDYISWDEYFMGVALISAKRSKDPNTQVGACIVDNDNKIVGIGYNGFPKGCSDDDLPWG- 64
Query: 146 NTHDELDM-----CHAEMNAILNKNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIYMC 200
N + L+ CHAE+NAILN + K C++Y +LFPCNECAK IIQ+GI EVIY+
Sbjct: 65 NKGEFLETKYPYACHAELNAILNSTGKNVKNCRVYATLFPCNECAKAIIQAGITEVIYLS 124
Query: 201 DK 202
DK
Sbjct: 125 DK 126
Score = 80.5 bits (197), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 37/66 (56%), Positives = 46/66 (69%)
Query: 1 MNAILNKNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIYMCDKHKQKPATIASKRMFD 60
+NAILN + K C++Y +LFPCNECAK IIQ+GI EVIY+ DK+K ASK MF+
Sbjct: 82 LNAILNSTGKNVKNCRVYATLFPCNECAKAIIQAGITEVIYLSDKYKDTDIVKASKFMFN 141
Query: 61 AAKVHY 66
A V Y
Sbjct: 142 KANVKY 147
>gi|404370359|ref|ZP_10975682.1| hypothetical protein CSBG_02341 [Clostridium sp. 7_2_43FAA]
gi|226913514|gb|EEH98715.1| hypothetical protein CSBG_02341 [Clostridium sp. 7_2_43FAA]
Length = 164
Score = 152 bits (384), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 71/122 (58%), Positives = 87/122 (71%), Gaps = 6/122 (4%)
Query: 86 DDVLEWHEYFMASAFLVAKRSKDPVTRVGAVIVNEDNKIVGTGYNGMPIGCSDDEFPWDK 145
+D + W EYFM A L KRSKDP T+VGA IV+ DNKI+ GYNG+P GCSDDEFPWD+
Sbjct: 4 NDYISWDEYFMGVAILAGKRSKDPSTQVGACIVDNDNKILSQGYNGLPRGCSDDEFPWDR 63
Query: 146 NTHDELD-----MCHAEMNAILNKNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIYMC 200
H L+ + HAE+NAILN + K+Y +LFPCNECAK IIQ+GIKEV+Y+
Sbjct: 64 EGH-VLETKYPYVVHAELNAILNSRGTNLYGAKIYVALFPCNECAKAIIQAGIKEVVYLS 122
Query: 201 DK 202
DK
Sbjct: 123 DK 124
Score = 73.2 bits (178), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 33/64 (51%), Positives = 43/64 (67%)
Query: 1 MNAILNKNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIYMCDKHKQKPATIASKRMFD 60
+NAILN + K+Y +LFPCNECAK IIQ+GIKEV+Y+ DK+ ASKR+
Sbjct: 80 LNAILNSRGTNLYGAKIYVALFPCNECAKAIIQAGIKEVVYLSDKYSDSDNVKASKRLLS 139
Query: 61 AAKV 64
A+ V
Sbjct: 140 ASGV 143
>gi|451948797|ref|YP_007469392.1| deoxycytidylate deaminase [Desulfocapsa sulfexigens DSM 10523]
gi|451908145|gb|AGF79739.1| deoxycytidylate deaminase [Desulfocapsa sulfexigens DSM 10523]
Length = 168
Score = 152 bits (383), Expect = 9e-35, Method: Compositional matrix adjust.
Identities = 70/119 (58%), Positives = 85/119 (71%), Gaps = 6/119 (5%)
Query: 89 LEWHEYFMASAFLVAKRSKDPVTRVGAVIVNEDNKIVGTGYNGMPIGCSDDEFPWDKNTH 148
L W EYFMA A L A+RSKDP T+VGA + NE+NKIVG GYNG P GC DDE PW +
Sbjct: 12 LSWDEYFMAVALLSAQRSKDPSTQVGACVANENNKIVGVGYNGFPWGCPDDELPWAREGK 71
Query: 149 DELD-----MCHAEMNAILNKNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIYMCDK 202
LD +CHAE+NA+LN + + C++Y LFPCNEC KVIIQSGI+E+IY+ DK
Sbjct: 72 -YLDTKYPFVCHAELNAVLNSTAPNLNDCRIYVGLFPCNECTKVIIQSGIREIIYLSDK 129
Score = 75.5 bits (184), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 32/66 (48%), Positives = 44/66 (66%)
Query: 1 MNAILNKNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIYMCDKHKQKPATIASKRMFD 60
+NA+LN + + C++Y LFPCNEC KVIIQSGI+E+IY+ DK+ + ASK M D
Sbjct: 85 LNAVLNSTAPNLNDCRIYVGLFPCNECTKVIIQSGIREIIYLSDKYADSDSVRASKLMLD 144
Query: 61 AAKVHY 66
+ Y
Sbjct: 145 TSGTLY 150
>gi|268611051|ref|ZP_06144778.1| dCMP deaminase [Ruminococcus flavefaciens FD-1]
Length = 160
Score = 152 bits (383), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 70/121 (57%), Positives = 87/121 (71%), Gaps = 5/121 (4%)
Query: 87 DVLEWHEYFMASAFLVAKRSKDPVTRVGAVIVNEDNKIVGTGYNGMPIGCSDDEFPWDKN 146
D + W EYFM A L A+RSKD T+VGA IVN+++KIV GYNGMP GC DDE PW+++
Sbjct: 5 DYISWDEYFMGIAMLSAQRSKDNSTQVGACIVNDEHKIVSVGYNGMPTGCDDDEMPWERS 64
Query: 147 THDELD-----MCHAEMNAILNKNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIYMCD 201
+ELD +CHAE+NAILN N + C +Y +LFPCNECAK IIQSGIK V+Y +
Sbjct: 65 AENELDTKYPFVCHAELNAILNSNIGNLSGCTVYVTLFPCNECAKAIIQSGIKRVVYYSN 124
Query: 202 K 202
K
Sbjct: 125 K 125
Score = 70.9 bits (172), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 33/66 (50%), Positives = 42/66 (63%)
Query: 1 MNAILNKNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIYMCDKHKQKPATIASKRMFD 60
+NAILN N + C +Y +LFPCNECAK IIQSGIK V+Y +K+ + AS +FD
Sbjct: 81 LNAILNSNIGNLSGCTVYVTLFPCNECAKAIIQSGIKRVVYYSNKYSDTNSVKASCLLFD 140
Query: 61 AAKVHY 66
V Y
Sbjct: 141 KCGVKY 146
>gi|326430014|gb|EGD75584.1| deoxycytidylate deaminase [Salpingoeca sp. ATCC 50818]
Length = 237
Score = 152 bits (383), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 71/117 (60%), Positives = 86/117 (73%), Gaps = 8/117 (6%)
Query: 91 WHEYFMASAFLVAKRSKDPVTRVGAVIVNEDNKIVGTGYNGMPIGCSDDEFPWDKNTHDE 150
WH MA A L +KRSKDPVT+VG VIV+ +V GYNG PIGCSD+E PWDK+ +
Sbjct: 22 WH---MAMAILASKRSKDPVTQVGCVIVDPKGIVVSMGYNGFPIGCSDEELPWDKHADNP 78
Query: 151 LD-----MCHAEMNAILNKNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIYMCDK 202
L+ +CHAEMNAILN N D C LY +LFPCNECAK+IIQ+GIKEV+Y+C+K
Sbjct: 79 LETKFPYVCHAEMNAILNTNDQDVSGCILYATLFPCNECAKMIIQAGIKEVVYLCNK 135
Score = 92.8 bits (229), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 41/66 (62%), Positives = 50/66 (75%)
Query: 1 MNAILNKNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIYMCDKHKQKPATIASKRMFD 60
MNAILN N D C LY +LFPCNECAK+IIQ+GIKEV+Y+C+K K KP +AS+ +FD
Sbjct: 91 MNAILNTNDQDVSGCILYATLFPCNECAKMIIQAGIKEVVYLCNKSKDKPLVVASRTLFD 150
Query: 61 AAKVHY 66
A V Y
Sbjct: 151 MAGVTY 156
>gi|429765270|ref|ZP_19297570.1| cytidine and deoxycytidylate deaminase zinc-binding region
[Clostridium celatum DSM 1785]
gi|429186720|gb|EKY27656.1| cytidine and deoxycytidylate deaminase zinc-binding region
[Clostridium celatum DSM 1785]
Length = 165
Score = 151 bits (382), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 73/119 (61%), Positives = 85/119 (71%), Gaps = 6/119 (5%)
Query: 89 LEWHEYFMASAFLVAKRSKDPVTRVGAVIVNEDNKIVGTGYNGMPIGCSDDEFPWDKNTH 148
L W +YFMA A L AKRSKDP T+VGA IVN++N I GYNG+P GCSDDEFPW N
Sbjct: 8 LSWDDYFMAVALLSAKRSKDPNTQVGACIVNKNNIIESIGYNGLPKGCSDDEFPWG-NEG 66
Query: 149 DELD-----MCHAEMNAILNKNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIYMCDK 202
D LD + HAE+NAILN D C++Y +LFPCNECAK IIQSGI EV+Y+ DK
Sbjct: 67 DALDTKYPFVVHAELNAILNAKGKDLSNCRIYVALFPCNECAKAIIQSGINEVVYLSDK 125
Score = 82.4 bits (202), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 42/86 (48%), Positives = 53/86 (61%), Gaps = 9/86 (10%)
Query: 1 MNAILNKNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIYMCDKHKQKPATIASKRMFD 60
+NAILN D C++Y +LFPCNECAK IIQSGI EV+Y+ DK+ + ASKRMF
Sbjct: 81 LNAILNAKGKDLSNCRIYVALFPCNECAKAIIQSGINEVVYLSDKYANTDSVKASKRMFK 140
Query: 61 AAKVHYWSEMDKMNGVQNGSPHKRVD 86
AA V N Q S H+++D
Sbjct: 141 AAGV---------NLKQIESAHEKID 157
>gi|194748439|ref|XP_001956653.1| GF25318 [Drosophila ananassae]
gi|190623935|gb|EDV39459.1| GF25318 [Drosophila ananassae]
Length = 187
Score = 151 bits (381), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 73/131 (55%), Positives = 89/131 (67%), Gaps = 11/131 (8%)
Query: 82 HKRVDDVLEWHEYFMASAFLVAKRSKDPVTRVGAVIVNEDNKIVGTGYNGMPIGCSDDEF 141
HKR+ L W +YFMA++ L A+RSKDPVT+VGA IV+ N+IV GYNG P CSDDEF
Sbjct: 4 HKRMS-YLHWDDYFMATSLLSAQRSKDPVTQVGACIVDSQNRIVAIGYNGFPRNCSDDEF 62
Query: 142 PWDKNTHDELD----------MCHAEMNAILNKNSADTKRCKLYTSLFPCNECAKVIIQS 191
PW K D D + HAE NAILN N A +LYT+LFPCNECAK+IIQS
Sbjct: 63 PWTKAKKDTKDFDPLKDKKMYVVHAEANAILNSNGATLTGTRLYTTLFPCNECAKLIIQS 122
Query: 192 GIKEVIYMCDK 202
GI +++Y+ DK
Sbjct: 123 GISDILYLSDK 133
Score = 84.7 bits (208), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 42/89 (47%), Positives = 56/89 (62%), Gaps = 5/89 (5%)
Query: 2 NAILNKNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIYMCDKHKQKPATIASKRMFDA 61
NAILN N A +LYT+LFPCNECAK+IIQSGI +++Y+ DK+ +KP AS+RM DA
Sbjct: 90 NAILNSNGATLTGTRLYTTLFPCNECAKLIIQSGISDILYLSDKYAEKPTYRASRRMLDA 149
Query: 62 AKVHYWSEMDKMNGVQNGSPHKRVDDVLE 90
V + + K + DD+LE
Sbjct: 150 VGVGHRRHVPKQKQII-----INFDDILE 173
>gi|325970393|ref|YP_004246584.1| dCMP deaminase [Sphaerochaeta globus str. Buddy]
gi|324025631|gb|ADY12390.1| dCMP deaminase [Sphaerochaeta globus str. Buddy]
Length = 161
Score = 150 bits (380), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 72/121 (59%), Positives = 86/121 (71%), Gaps = 6/121 (4%)
Query: 87 DVLEWHEYFMASAFLVAKRSKDPVTRVGAVIVNEDNKIVGTGYNGMPIGCSDDEFPWDKN 146
D + W EYFM A L + RSKDP T+VGA I+N D+KIVG GYNG PIG +DDE PW++
Sbjct: 6 DYISWDEYFMGVAVLSSMRSKDPSTQVGACIINADHKIVGVGYNGFPIGVNDDEVPWERE 65
Query: 147 THDELD-----MCHAEMNAILNKNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIYMCD 201
LD +CHAE+NAILN S+ K C LY LFPCNECAK IIQSGI+EV+Y+ D
Sbjct: 66 GA-WLDTKYPYVCHAELNAILNAISSSLKGCSLYVGLFPCNECAKAIIQSGIREVVYLSD 124
Query: 202 K 202
K
Sbjct: 125 K 125
Score = 83.2 bits (204), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 39/66 (59%), Positives = 46/66 (69%)
Query: 1 MNAILNKNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIYMCDKHKQKPATIASKRMFD 60
+NAILN S+ K C LY LFPCNECAK IIQSGI+EV+Y+ DK+ + T ASK MFD
Sbjct: 81 LNAILNAISSSLKGCSLYVGLFPCNECAKAIIQSGIREVVYLSDKYAEAENTKASKWMFD 140
Query: 61 AAKVHY 66
V Y
Sbjct: 141 QTGVTY 146
>gi|225456327|ref|XP_002283817.1| PREDICTED: deoxycytidylate deaminase [Vitis vinifera]
gi|297734422|emb|CBI15669.3| unnamed protein product [Vitis vinifera]
Length = 229
Score = 150 bits (379), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 80/174 (45%), Positives = 106/174 (60%), Gaps = 22/174 (12%)
Query: 51 ATIASKRMFDAAKVHYWSEMDKMNGVQNG-------------SPHKRVDDVLEWHEYFMA 97
+T+A + F K ++ + NG QNG P KR L W +YFMA
Sbjct: 20 STLAIRFFFTNPKNYFSGKHSSQNG-QNGVVSTKTAHSQSPFDPSKR-RGYLSWDDYFMA 77
Query: 98 SAFLVAKRSKDPVTRVGAVIVNEDNKIVGTGYNGMPIGCSDDEFPWDK--NTHDELD--- 152
AFL A+RSKDP +VGA +V+++ I+G GYNG P GCSDD+ PW K T D L+
Sbjct: 78 IAFLSAERSKDPNRQVGACLVSQNGVILGIGYNGFPRGCSDDKLPWAKKSKTGDPLETKY 137
Query: 153 --MCHAEMNAILNKNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIYMCDKQM 204
+CHAE+NAILN N A +LY ++FPCNECAK+IIQSG+ EVIY +K++
Sbjct: 138 PYVCHAEVNAILNTNHASAAGQRLYVTMFPCNECAKIIIQSGVSEVIYFVEKRL 191
Score = 68.6 bits (166), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 34/78 (43%), Positives = 48/78 (61%), Gaps = 2/78 (2%)
Query: 1 MNAILNKNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIYMCDK--HKQKPATIASKRM 58
+NAILN N A +LY ++FPCNECAK+IIQSG+ EVIY +K + + A IAS ++
Sbjct: 145 VNAILNTNHASAAGQRLYVTMFPCNECAKIIIQSGVSEVIYFVEKRLNNSQVAYIASHKL 204
Query: 59 FDAAKVHYWSEMDKMNGV 76
A V +M+ +
Sbjct: 205 LSMAGVKVRKHQPQMDQI 222
>gi|223984558|ref|ZP_03634689.1| hypothetical protein HOLDEFILI_01984 [Holdemania filiformis DSM
12042]
gi|223963486|gb|EEF67867.1| hypothetical protein HOLDEFILI_01984 [Holdemania filiformis DSM
12042]
Length = 160
Score = 150 bits (378), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 72/119 (60%), Positives = 88/119 (73%), Gaps = 5/119 (4%)
Query: 88 VLEWHEYFMASAFLVAKRSKDPVTRVGAVIVNEDNKIVGTGYNGMPIGCSDDEFPWDKNT 147
VL W EYFM A L A RSKDP T+VGAVIV++++K+VG GYNG+PIGCSDDEFPWD+
Sbjct: 6 VLSWDEYFMGLAHLSAMRSKDPSTQVGAVIVDQEHKVVGIGYNGLPIGCSDDEFPWDREG 65
Query: 148 H----DELDMCHAEMNAILNKNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIYMCDK 202
+ HAE+NAILN ++ D C LY SLFPCNECAK IIQSGI++++Y DK
Sbjct: 66 GMLETKYAFVVHAELNAILN-STRDLHGCTLYVSLFPCNECAKAIIQSGIRKIVYEDDK 123
Score = 73.9 bits (180), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 36/64 (56%), Positives = 46/64 (71%), Gaps = 1/64 (1%)
Query: 1 MNAILNKNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIYMCDKHKQKPATIASKRMFD 60
+NAILN ++ D C LY SLFPCNECAK IIQSGI++++Y DK+ IASK+M +
Sbjct: 80 LNAILN-STRDLHGCTLYVSLFPCNECAKAIIQSGIRKIVYEDDKYAAADNVIASKKMLN 138
Query: 61 AAKV 64
AA V
Sbjct: 139 AAGV 142
>gi|336421434|ref|ZP_08601592.1| hypothetical protein HMPREF0993_00969 [Lachnospiraceae bacterium
5_1_57FAA]
gi|336000713|gb|EGN30860.1| hypothetical protein HMPREF0993_00969 [Lachnospiraceae bacterium
5_1_57FAA]
Length = 162
Score = 150 bits (378), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 71/121 (58%), Positives = 84/121 (69%), Gaps = 5/121 (4%)
Query: 87 DVLEWHEYFMASAFLVAKRSKDPVTRVGAVIVNEDNKIVGTGYNGMPIGCSDDEFPWDKN 146
D + W EYFM A L RSKDP T+VG IV++DNKI+ GYNG+P+GCSDDEFPW +
Sbjct: 7 DYISWDEYFMGVAMLSGMRSKDPNTQVGCCIVSQDNKILSMGYNGLPMGCSDDEFPWVRE 66
Query: 147 THDELD-----MCHAEMNAILNKNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIYMCD 201
D L+ H+E+NAILN + KLY SLFPCNECAK IIQSGIKEVIY C+
Sbjct: 67 GDDPLETKYVYTVHSELNAILNYRGGSLEGAKLYVSLFPCNECAKAIIQSGIKEVIYDCN 126
Query: 202 K 202
K
Sbjct: 127 K 127
Score = 85.5 bits (210), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 41/66 (62%), Positives = 48/66 (72%)
Query: 1 MNAILNKNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIYMCDKHKQKPATIASKRMFD 60
+NAILN + KLY SLFPCNECAK IIQSGIKEVIY C+K++ + AS RMFD
Sbjct: 83 LNAILNYRGGSLEGAKLYVSLFPCNECAKAIIQSGIKEVIYDCNKYEDTSSVKASMRMFD 142
Query: 61 AAKVHY 66
AA V+Y
Sbjct: 143 AAGVNY 148
>gi|154505649|ref|ZP_02042387.1| hypothetical protein RUMGNA_03188 [Ruminococcus gnavus ATCC 29149]
gi|153794088|gb|EDN76508.1| cytidine and deoxycytidylate deaminase zinc-binding region
[Ruminococcus gnavus ATCC 29149]
Length = 162
Score = 150 bits (378), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 72/122 (59%), Positives = 83/122 (68%), Gaps = 5/122 (4%)
Query: 86 DDVLEWHEYFMASAFLVAKRSKDPVTRVGAVIVNEDNKIVGTGYNGMPIGCSDDEFPWDK 145
+D L W EYFM A L RSKDP T+VG IV++DNKI+ GYNG P GCSDDEFPW +
Sbjct: 6 EDYLTWDEYFMGVAMLSGMRSKDPNTQVGCCIVSQDNKILSMGYNGFPKGCSDDEFPWAR 65
Query: 146 NTHDELDM-----CHAEMNAILNKNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIYMC 200
+ L+ H+E+NAILN + KLY SLFPCNECAK IIQSGIKEVIY C
Sbjct: 66 EGENPLETKYVYSTHSELNAILNYSGGSLAGAKLYVSLFPCNECAKAIIQSGIKEVIYDC 125
Query: 201 DK 202
DK
Sbjct: 126 DK 127
Score = 90.9 bits (224), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 43/66 (65%), Positives = 48/66 (72%)
Query: 1 MNAILNKNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIYMCDKHKQKPATIASKRMFD 60
+NAILN + KLY SLFPCNECAK IIQSGIKEVIY CDK+ P+ +ASKRM D
Sbjct: 83 LNAILNYSGGSLAGAKLYVSLFPCNECAKAIIQSGIKEVIYDCDKYADTPSVMASKRMMD 142
Query: 61 AAKVHY 66
AA V Y
Sbjct: 143 AAGVRY 148
>gi|167760281|ref|ZP_02432408.1| hypothetical protein CLOSCI_02654 [Clostridium scindens ATCC 35704]
gi|167662164|gb|EDS06294.1| cytidine and deoxycytidylate deaminase zinc-binding region
[Clostridium scindens ATCC 35704]
Length = 164
Score = 150 bits (378), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 71/121 (58%), Positives = 84/121 (69%), Gaps = 5/121 (4%)
Query: 87 DVLEWHEYFMASAFLVAKRSKDPVTRVGAVIVNEDNKIVGTGYNGMPIGCSDDEFPWDKN 146
D + W EYFM A L RSKDP T+VG IV++DNKI+ GYNG+P+GCSDDEFPW +
Sbjct: 9 DYISWDEYFMGVAMLSGMRSKDPNTQVGCCIVSQDNKILSMGYNGLPMGCSDDEFPWVRE 68
Query: 147 THDELD-----MCHAEMNAILNKNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIYMCD 201
D L+ H+E+NAILN + KLY SLFPCNECAK IIQSGIKEVIY C+
Sbjct: 69 GDDPLETKYVYTVHSELNAILNYRGGSLEGAKLYVSLFPCNECAKAIIQSGIKEVIYDCN 128
Query: 202 K 202
K
Sbjct: 129 K 129
Score = 85.5 bits (210), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 41/66 (62%), Positives = 48/66 (72%)
Query: 1 MNAILNKNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIYMCDKHKQKPATIASKRMFD 60
+NAILN + KLY SLFPCNECAK IIQSGIKEVIY C+K++ + AS RMFD
Sbjct: 85 LNAILNYRGGSLEGAKLYVSLFPCNECAKAIIQSGIKEVIYDCNKYEDTSSVKASMRMFD 144
Query: 61 AAKVHY 66
AA V+Y
Sbjct: 145 AAGVNY 150
>gi|226325555|ref|ZP_03801073.1| hypothetical protein COPCOM_03360 [Coprococcus comes ATCC 27758]
gi|225206038|gb|EEG88392.1| cytidine and deoxycytidylate deaminase zinc-binding region
[Coprococcus comes ATCC 27758]
Length = 162
Score = 149 bits (376), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 71/121 (58%), Positives = 83/121 (68%), Gaps = 5/121 (4%)
Query: 87 DVLEWHEYFMASAFLVAKRSKDPVTRVGAVIVNEDNKIVGTGYNGMPIGCSDDEFPWDKN 146
D + W EYFM A L +RSKDP T+VG IV+ DNKI+ GYNG+P GCSDDEFPW++
Sbjct: 7 DYISWDEYFMGVAILSGRRSKDPNTQVGCCIVSADNKILSMGYNGLPRGCSDDEFPWERE 66
Query: 147 THDELD-----MCHAEMNAILNKNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIYMCD 201
D L H+E+NAILN + + KLY SLFPCNECAK IIQSGIKEVIY D
Sbjct: 67 GEDPLKTKYVYTVHSELNAILNYSGGSLEGAKLYVSLFPCNECAKAIIQSGIKEVIYDSD 126
Query: 202 K 202
K
Sbjct: 127 K 127
Score = 80.9 bits (198), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 40/66 (60%), Positives = 45/66 (68%)
Query: 1 MNAILNKNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIYMCDKHKQKPATIASKRMFD 60
+NAILN + + KLY SLFPCNECAK IIQSGIKEVIY DK+ + ASK MFD
Sbjct: 83 LNAILNYSGGSLEGAKLYVSLFPCNECAKAIIQSGIKEVIYDSDKYADTTSVKASKMMFD 142
Query: 61 AAKVHY 66
A V Y
Sbjct: 143 CAGVRY 148
>gi|313212148|emb|CBY16157.1| unnamed protein product [Oikopleura dioica]
Length = 195
Score = 149 bits (376), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 72/128 (56%), Positives = 91/128 (71%), Gaps = 6/128 (4%)
Query: 83 KRVDDVLEWHEYFMASAFLVAKRSKDPVTRVGAVIVNEDNKIVGTGYNGMPIGCSDDEFP 142
K +D L W EYFM+ A L ++RSKDP T+VGA I+N+ +IVG GYNG+P GCSD E P
Sbjct: 3 KPREDYLSWDEYFMSIALLSSQRSKDPATQVGACIINKKQRIVGIGYNGLPHGCSDKELP 62
Query: 143 WDKNTHDELD-----MCHAEMNAILNKNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVI 197
W K T D ++ +CHAEMNAILNKN AD ++T+L+PCNECAK+IIQSGI +V+
Sbjct: 63 WGK-TGDWMETKYPYVCHAEMNAILNKNQADIDGGTIFTTLYPCNECAKLIIQSGISKVV 121
Query: 198 YMCDKQMS 205
Y K S
Sbjct: 122 YANKKPGS 129
Score = 72.0 bits (175), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 35/64 (54%), Positives = 44/64 (68%)
Query: 1 MNAILNKNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIYMCDKHKQKPATIASKRMFD 60
MNAILNKN AD ++T+L+PCNECAK+IIQSGI +V+Y K PA AS+R+
Sbjct: 82 MNAILNKNQADIDGGTIFTTLYPCNECAKLIIQSGISKVVYANKKPGSVPAFDASERLLK 141
Query: 61 AAKV 64
A V
Sbjct: 142 MAGV 145
>gi|427414175|ref|ZP_18904365.1| hypothetical protein HMPREF9282_01772 [Veillonella ratti
ACS-216-V-Col6b]
gi|425714551|gb|EKU77554.1| hypothetical protein HMPREF9282_01772 [Veillonella ratti
ACS-216-V-Col6b]
Length = 159
Score = 149 bits (376), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 70/119 (58%), Positives = 86/119 (72%), Gaps = 3/119 (2%)
Query: 87 DVLEWHEYFMASAFLVAKRSKDPVTRVGAVIVNEDNKIVGTGYNGMPIGCSDDEFPWDKN 146
D + W EYFM A L A+RSKDP T+VGA IV++DNKI+ GYNGMP+GCSDDEF W ++
Sbjct: 6 DYITWDEYFMGVAILAAQRSKDPNTQVGACIVSQDNKILSIGYNGMPLGCSDDEFAWGRD 65
Query: 147 T-HDE--LDMCHAEMNAILNKNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIYMCDK 202
HD + H+E+NAILN + K+Y +LFPCNECAK IIQSGI+EVIY DK
Sbjct: 66 VEHDNKYFYIVHSELNAILNYRGGSLEGSKIYVTLFPCNECAKAIIQSGIREVIYWQDK 124
Score = 81.6 bits (200), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 38/65 (58%), Positives = 44/65 (67%)
Query: 1 MNAILNKNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIYMCDKHKQKPATIASKRMFD 60
+NAILN + K+Y +LFPCNECAK IIQSGI+EVIY DK+K P IASKRM
Sbjct: 80 LNAILNYRGGSLEGSKIYVTLFPCNECAKAIIQSGIREVIYWQDKYKDTPEVIASKRMLR 139
Query: 61 AAKVH 65
A V
Sbjct: 140 TAGVQ 144
>gi|336431817|ref|ZP_08611659.1| hypothetical protein HMPREF0991_00778 [Lachnospiraceae bacterium
2_1_58FAA]
gi|336019836|gb|EGN49558.1| hypothetical protein HMPREF0991_00778 [Lachnospiraceae bacterium
2_1_58FAA]
Length = 162
Score = 149 bits (376), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 72/122 (59%), Positives = 83/122 (68%), Gaps = 5/122 (4%)
Query: 86 DDVLEWHEYFMASAFLVAKRSKDPVTRVGAVIVNEDNKIVGTGYNGMPIGCSDDEFPWDK 145
+D L W EYFM A L RSKDP T+VG IV++DNKI+ GYNG P GCSDDEFPW +
Sbjct: 6 EDYLTWDEYFMGVAMLSGMRSKDPNTQVGCCIVSQDNKILSMGYNGFPKGCSDDEFPWAR 65
Query: 146 NTHDELDM-----CHAEMNAILNKNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIYMC 200
+ L+ H+E+NAILN + KLY SLFPCNECAK IIQSGIKEVIY C
Sbjct: 66 EGENPLETKYVYSTHSELNAILNYSGGSLVGAKLYVSLFPCNECAKAIIQSGIKEVIYDC 125
Query: 201 DK 202
DK
Sbjct: 126 DK 127
Score = 90.5 bits (223), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 43/66 (65%), Positives = 48/66 (72%)
Query: 1 MNAILNKNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIYMCDKHKQKPATIASKRMFD 60
+NAILN + KLY SLFPCNECAK IIQSGIKEVIY CDK+ P+ +ASKRM D
Sbjct: 83 LNAILNYSGGSLVGAKLYVSLFPCNECAKAIIQSGIKEVIYDCDKYADTPSVMASKRMMD 142
Query: 61 AAKVHY 66
AA V Y
Sbjct: 143 AAGVRY 148
>gi|302384784|ref|YP_003820606.1| dCMP deaminase [Clostridium saccharolyticum WM1]
gi|302195412|gb|ADL02983.1| dCMP deaminase [Clostridium saccharolyticum WM1]
Length = 164
Score = 149 bits (375), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 68/124 (54%), Positives = 84/124 (67%), Gaps = 7/124 (5%)
Query: 86 DDVLEWHEYFMASAFLVAKRSKDPVTRVGAVIVNEDNKIVGTGYNGMPIGCSDDEFPWDK 145
+D + W EYFM A L +KRSKDP T+VGA IV++DNKI+ GYNG P+GCSDDEFPWD+
Sbjct: 6 EDYITWDEYFMGVAALSSKRSKDPSTQVGACIVSQDNKILSMGYNGFPMGCSDDEFPWDR 65
Query: 146 NTHDE-------LDMCHAEMNAILNKNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIY 198
E H+E+NAILN + KLY +LFPCNECAK IIQ+GIK ++Y
Sbjct: 66 ENEQEDPYNAKYFYSTHSELNAILNYRGGSLEGSKLYVTLFPCNECAKAIIQAGIKTIVY 125
Query: 199 MCDK 202
DK
Sbjct: 126 GSDK 129
Score = 82.8 bits (203), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 37/67 (55%), Positives = 47/67 (70%)
Query: 1 MNAILNKNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIYMCDKHKQKPATIASKRMFD 60
+NAILN + KLY +LFPCNECAK IIQ+GIK ++Y DK++ PA ASKRM +
Sbjct: 85 LNAILNYRGGSLEGSKLYVTLFPCNECAKAIIQAGIKTIVYGSDKYEGTPAVNASKRMLN 144
Query: 61 AAKVHYW 67
AA V Y+
Sbjct: 145 AAGVRYY 151
>gi|331092051|ref|ZP_08340882.1| hypothetical protein HMPREF9477_01525 [Lachnospiraceae bacterium
2_1_46FAA]
gi|330402252|gb|EGG81823.1| hypothetical protein HMPREF9477_01525 [Lachnospiraceae bacterium
2_1_46FAA]
Length = 162
Score = 149 bits (375), Expect = 9e-34, Method: Compositional matrix adjust.
Identities = 70/125 (56%), Positives = 85/125 (68%), Gaps = 5/125 (4%)
Query: 83 KRVDDVLEWHEYFMASAFLVAKRSKDPVTRVGAVIVNEDNKIVGTGYNGMPIGCSDDEFP 142
++ +D + W EYFM A L RSKDP T+VG IV++DNKI+ GYNG+P GCSDDEFP
Sbjct: 3 EKRNDYISWDEYFMGVAMLSGMRSKDPSTQVGCCIVSQDNKILSMGYNGLPKGCSDDEFP 62
Query: 143 WDKNTHDELD-----MCHAEMNAILNKNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVI 197
W + D L+ H+E+NAILN + KLY SLFPCNECAK IIQSGIKEV+
Sbjct: 63 WTREGEDPLETKYVYTVHSELNAILNYSGGSLAGAKLYVSLFPCNECAKAIIQSGIKEVV 122
Query: 198 YMCDK 202
Y DK
Sbjct: 123 YDSDK 127
Score = 81.6 bits (200), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 39/66 (59%), Positives = 45/66 (68%)
Query: 1 MNAILNKNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIYMCDKHKQKPATIASKRMFD 60
+NAILN + KLY SLFPCNECAK IIQSGIKEV+Y DK+ + +ASKRM D
Sbjct: 83 LNAILNYSGGSLAGAKLYVSLFPCNECAKAIIQSGIKEVVYDSDKYADTASVMASKRMMD 142
Query: 61 AAKVHY 66
A V Y
Sbjct: 143 CAGVRY 148
>gi|449454826|ref|XP_004145155.1| PREDICTED: deoxycytidylate deaminase-like [Cucumis sativus]
gi|449474257|ref|XP_004154120.1| PREDICTED: deoxycytidylate deaminase-like [Cucumis sativus]
gi|449503680|ref|XP_004162123.1| PREDICTED: deoxycytidylate deaminase-like [Cucumis sativus]
Length = 226
Score = 149 bits (375), Expect = 9e-34, Method: Compositional matrix adjust.
Identities = 80/163 (49%), Positives = 104/163 (63%), Gaps = 16/163 (9%)
Query: 57 RMFDAAKVHYWSEMDKMNG--VQNGS------PHKRVDDVLEWHEYFMASAFLVAKRSKD 108
R F + K H NG + NGS P KR + L W +YFMA AFL A+RSKD
Sbjct: 25 RFFFSPKKHRSRFDLSRNGALLNNGSSRCPFDPSKR-EGFLSWDDYFMAIAFLSAERSKD 83
Query: 109 PVTRVGAVIVNEDNKIVGTGYNGMPIGCSDDEFPWDK--NTHDELD-----MCHAEMNAI 161
P +VGA +V+++ I+G GYNG P GCSDD+ PW K T++ L+ +CHAE+NAI
Sbjct: 84 PNRQVGACLVSQNGVILGIGYNGFPRGCSDDQLPWAKKSKTNNPLETKYPYVCHAEVNAI 143
Query: 162 LNKNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIYMCDKQM 204
LN N A KLY ++FPCNECAK+IIQSG+ EVIY +K++
Sbjct: 144 LNTNHASASGQKLYVTMFPCNECAKIIIQSGVSEVIYFVEKRI 186
Score = 65.5 bits (158), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 33/66 (50%), Positives = 42/66 (63%), Gaps = 2/66 (3%)
Query: 1 MNAILNKNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIYMCDK--HKQKPATIASKRM 58
+NAILN N A KLY ++FPCNECAK+IIQSG+ EVIY +K + A AS ++
Sbjct: 140 VNAILNTNHASASGQKLYVTMFPCNECAKIIIQSGVSEVIYFVEKRINNSNVAYFASHKL 199
Query: 59 FDAAKV 64
A V
Sbjct: 200 LSMAGV 205
>gi|308813003|ref|XP_003083808.1| cytidine/deoxycytidylate deaminase family protein (ISS)
[Ostreococcus tauri]
gi|116055690|emb|CAL57775.1| cytidine/deoxycytidylate deaminase family protein (ISS)
[Ostreococcus tauri]
Length = 290
Score = 149 bits (375), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 72/126 (57%), Positives = 89/126 (70%), Gaps = 8/126 (6%)
Query: 80 SPHKRVDDVLEWHEYFMASAFLVAKRSKDPVTRVGAVIVNEDNKIVGTGYNGMPIGCSDD 139
SP KR D L W +YFM+ AFL A+RSKDP +VGA IV ED I+G GYNG P GC+D
Sbjct: 90 SPTKR-DRYLSWDDYFMSVAFLSAQRSKDPNKQVGACIVGEDKLILGVGYNGFPRGCADS 148
Query: 140 EFPWDKNT--HDELD-----MCHAEMNAILNKNSADTKRCKLYTSLFPCNECAKVIIQSG 192
PW K + DEL+ +CHAEMNAI+NKNSA LY +++PCNECAK+IIQ+G
Sbjct: 149 ALPWAKKSTNGDELETKYPYVCHAEMNAIMNKNSASVAGGTLYVTMYPCNECAKLIIQAG 208
Query: 193 IKEVIY 198
I+EV+Y
Sbjct: 209 IREVVY 214
Score = 63.5 bits (153), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 30/62 (48%), Positives = 41/62 (66%)
Query: 1 MNAILNKNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIYMCDKHKQKPATIASKRMFD 60
MNAI+NKNSA LY +++PCNECAK+IIQ+GI+EV+Y K + T S + D
Sbjct: 174 MNAIMNKNSASVAGGTLYVTMYPCNECAKLIIQAGIREVVYYEGKISEAKETPMSPGVSD 233
Query: 61 AA 62
+
Sbjct: 234 GS 235
>gi|310826939|ref|YP_003959296.1| hypothetical protein [Eubacterium limosum KIST612]
gi|308738673|gb|ADO36333.1| hypothetical protein ELI_1347 [Eubacterium limosum KIST612]
Length = 159
Score = 148 bits (373), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 73/122 (59%), Positives = 84/122 (68%), Gaps = 6/122 (4%)
Query: 86 DDVLEWHEYFMASAFLVAKRSKDPVTRVGAVIVNEDNKIVGTGYNGMPIGCSDDEFPWDK 145
+D L W EYFM A L AKRSKDP T+VGA IV+ DNKI+ GYNGMP GC DD PW++
Sbjct: 4 EDYLSWDEYFMGIALLAAKRSKDPGTQVGACIVSPDNKILTMGYNGMPTGCHDDNMPWER 63
Query: 146 NTHDELD-----MCHAEMNAILNKNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIYMC 200
D L+ +CHAE NAILN K LY +LFPCNECAK IIQSGI++VIYM
Sbjct: 64 EG-DPLETKYLYVCHAEFNAILNNGGRSLKGATLYATLFPCNECAKAIIQSGIQKVIYME 122
Query: 201 DK 202
DK
Sbjct: 123 DK 124
Score = 81.3 bits (199), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 39/66 (59%), Positives = 44/66 (66%)
Query: 1 MNAILNKNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIYMCDKHKQKPATIASKRMFD 60
NAILN K LY +LFPCNECAK IIQSGI++VIYM DK+ A IASKRMFD
Sbjct: 80 FNAILNNGGRSLKGATLYATLFPCNECAKAIIQSGIQKVIYMEDKYADTDAVIASKRMFD 139
Query: 61 AAKVHY 66
+ Y
Sbjct: 140 MVGITY 145
>gi|325679150|ref|ZP_08158742.1| cytidine and deoxycytidylate deaminase zinc-binding region
[Ruminococcus albus 8]
gi|324109155|gb|EGC03379.1| cytidine and deoxycytidylate deaminase zinc-binding region
[Ruminococcus albus 8]
Length = 159
Score = 148 bits (373), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 75/125 (60%), Positives = 90/125 (72%), Gaps = 7/125 (5%)
Query: 83 KRVDDVLEWHEYFMASAFLVAKRSKDPVTRVGAVIVNEDNKIVGTGYNGMPIGCSDDEFP 142
K+ + + W +YF+ A L A RSKDP T+VGA IV+E+NKI+ GYNGMP GC+DDE P
Sbjct: 2 KKRMNYISWDDYFLGIAELSAARSKDPNTQVGACIVSEENKILSVGYNGMPAGCNDDEMP 61
Query: 143 WDKNTHDELD-----MCHAEMNAILNKNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVI 197
W + D LD +CHAE+NAILN N D K ++Y SLFPCNECAK IIQSGIKEVI
Sbjct: 62 WGREG-DFLDTKYPFVCHAELNAILNSNH-DLKGSRIYVSLFPCNECAKAIIQSGIKEVI 119
Query: 198 YMCDK 202
Y CDK
Sbjct: 120 YTCDK 124
Score = 79.3 bits (194), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 41/64 (64%), Positives = 45/64 (70%), Gaps = 1/64 (1%)
Query: 1 MNAILNKNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIYMCDKHKQKPATIASKRMFD 60
+NAILN N D K ++Y SLFPCNECAK IIQSGIKEVIY CDK+ T ASK MF
Sbjct: 81 LNAILNSNH-DLKGSRIYVSLFPCNECAKAIIQSGIKEVIYTCDKYADTDGTKASKMMFK 139
Query: 61 AAKV 64
A V
Sbjct: 140 MAGV 143
>gi|309778050|ref|ZP_07672990.1| probable deoxycytidylate deaminase [Erysipelotrichaceae bacterium
3_1_53]
gi|308914187|gb|EFP59987.1| probable deoxycytidylate deaminase [Erysipelotrichaceae bacterium
3_1_53]
Length = 164
Score = 148 bits (373), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 73/122 (59%), Positives = 87/122 (71%), Gaps = 7/122 (5%)
Query: 86 DDVLEWHEYFMASAFLVAKRSKDPVTRVGAVIVNEDNKIVGTGYNGMPIGCSDDEFPWDK 145
+DVL W EYFM A L AKRSKDP T+VGAVIV++++++V GYNG P GCSDDEFPWD+
Sbjct: 4 EDVLTWDEYFMGLAHLSAKRSKDPSTQVGAVIVSDEHRVVSIGYNGFPNGCSDDEFPWDR 63
Query: 146 -----NTHDELDMCHAEMNAILNKNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIYMC 200
NT + HAE+NAILN D K C +Y SLFPCNECAK IIQSGI ++Y
Sbjct: 64 EGEFGNTKYPY-VVHAELNAILNSKH-DLKGCSIYVSLFPCNECAKAIIQSGISRIVYES 121
Query: 201 DK 202
DK
Sbjct: 122 DK 123
Score = 77.0 bits (188), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 37/64 (57%), Positives = 43/64 (67%), Gaps = 1/64 (1%)
Query: 1 MNAILNKNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIYMCDKHKQKPATIASKRMFD 60
+NAILN D K C +Y SLFPCNECAK IIQSGI ++Y DK+ TIASKRM
Sbjct: 80 LNAILNSKH-DLKGCSIYVSLFPCNECAKAIIQSGISRIVYESDKYGHTEGTIASKRMLR 138
Query: 61 AAKV 64
+A V
Sbjct: 139 SAGV 142
>gi|160893547|ref|ZP_02074331.1| hypothetical protein CLOL250_01101 [Clostridium sp. L2-50]
gi|156864532|gb|EDO57963.1| cytidine and deoxycytidylate deaminase zinc-binding region
[Clostridium sp. L2-50]
Length = 174
Score = 148 bits (373), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 73/131 (55%), Positives = 90/131 (68%), Gaps = 7/131 (5%)
Query: 80 SPHKRVDDVLEWHEYFMASAFLVAKRSKDPVTRVGAVIVNEDNKIVGTGYNGMPIGCSDD 139
+P KR D + W +YFM A L A+RSKDP T+VGA IV+++N+I+ GYNGMP GC DD
Sbjct: 14 TPMKRAD-YISWDQYFMGIALLSAERSKDPSTQVGACIVDDNNRILSEGYNGMPAGCEDD 72
Query: 140 EFPWDKNTHDELD-----MCHAEMNAILNKNSADTKRCKLYTSLFPCNECAKVIIQSGIK 194
PW K D L+ +CHAE+NAILN K +LY++LFPCNECAK IIQ GIK
Sbjct: 73 IMPWGK-IGDPLNNKYFFVCHAELNAILNYRGGSLKDARLYSTLFPCNECAKAIIQCGIK 131
Query: 195 EVIYMCDKQMS 205
EVIY+ DK S
Sbjct: 132 EVIYLSDKYAS 142
Score = 85.9 bits (211), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 40/66 (60%), Positives = 48/66 (72%)
Query: 1 MNAILNKNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIYMCDKHKQKPATIASKRMFD 60
+NAILN K +LY++LFPCNECAK IIQ GIKEVIY+ DK+ +T+ASKRMFD
Sbjct: 95 LNAILNYRGGSLKDARLYSTLFPCNECAKAIIQCGIKEVIYLSDKYASTDSTMASKRMFD 154
Query: 61 AAKVHY 66
A V Y
Sbjct: 155 MAGVAY 160
>gi|195348175|ref|XP_002040626.1| GM22266 [Drosophila sechellia]
gi|194122136|gb|EDW44179.1| GM22266 [Drosophila sechellia]
Length = 191
Score = 147 bits (372), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 74/131 (56%), Positives = 88/131 (67%), Gaps = 11/131 (8%)
Query: 82 HKRVDDVLEWHEYFMASAFLVAKRSKDPVTRVGAVIVNEDNKIVGTGYNGMPIGCSDDEF 141
HKR D L W +YFMA++ L AKRSKDPVT+VGA IV+ N+IV GYNG P CSDD F
Sbjct: 20 HKR-KDYLHWDDYFMATSLLSAKRSKDPVTQVGACIVDSQNRIVAIGYNGFPRNCSDDVF 78
Query: 142 PWDKNTH-----DELD-----MCHAEMNAILNKNSADTKRCKLYTSLFPCNECAKVIIQS 191
PW K T D L+ + HAE NAILN N +LYT+LFPCNECAK+IIQ
Sbjct: 79 PWSKATKRSKKDDPLEDKKMYVVHAEANAILNTNGMSLSGTRLYTTLFPCNECAKLIIQV 138
Query: 192 GIKEVIYMCDK 202
GI +V+Y+ DK
Sbjct: 139 GISQVLYLSDK 149
Score = 82.0 bits (201), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 38/65 (58%), Positives = 45/65 (69%)
Query: 2 NAILNKNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIYMCDKHKQKPATIASKRMFDA 61
NAILN N +LYT+LFPCNECAK+IIQ GI +V+Y+ DK+ KP ASKRM DA
Sbjct: 106 NAILNTNGMSLSGTRLYTTLFPCNECAKLIIQVGISQVLYLSDKYAYKPKYRASKRMLDA 165
Query: 62 AKVHY 66
V Y
Sbjct: 166 VGVEY 170
>gi|313901005|ref|ZP_07834493.1| cytidine and deoxycytidylate deaminase zinc-binding region
[Clostridium sp. HGF2]
gi|346314174|ref|ZP_08855695.1| hypothetical protein HMPREF9022_01352 [Erysipelotrichaceae
bacterium 2_2_44A]
gi|373121534|ref|ZP_09535402.1| hypothetical protein HMPREF0982_00331 [Erysipelotrichaceae
bacterium 21_3]
gi|422327550|ref|ZP_16408577.1| hypothetical protein HMPREF0981_01897 [Erysipelotrichaceae
bacterium 6_1_45]
gi|312953963|gb|EFR35643.1| cytidine and deoxycytidylate deaminase zinc-binding region
[Clostridium sp. HGF2]
gi|345906532|gb|EGX76256.1| hypothetical protein HMPREF9022_01352 [Erysipelotrichaceae
bacterium 2_2_44A]
gi|371663390|gb|EHO28580.1| hypothetical protein HMPREF0981_01897 [Erysipelotrichaceae
bacterium 6_1_45]
gi|371665552|gb|EHO30717.1| hypothetical protein HMPREF0982_00331 [Erysipelotrichaceae
bacterium 21_3]
Length = 164
Score = 147 bits (372), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 73/122 (59%), Positives = 87/122 (71%), Gaps = 7/122 (5%)
Query: 86 DDVLEWHEYFMASAFLVAKRSKDPVTRVGAVIVNEDNKIVGTGYNGMPIGCSDDEFPWDK 145
+DVL W EYFM A L AKRSKDP T+VGAVIV+ ++++V GYNG P GCSDDEFPWD+
Sbjct: 4 EDVLTWDEYFMGLAHLSAKRSKDPSTQVGAVIVSSEHRVVSIGYNGFPNGCSDDEFPWDR 63
Query: 146 -----NTHDELDMCHAEMNAILNKNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIYMC 200
NT + HAE+NAILN + D K C +Y SLFPCNECAK IIQSGI ++Y
Sbjct: 64 EGDFGNTKYPY-VVHAELNAILN-SKHDLKGCSIYVSLFPCNECAKAIIQSGISRIVYES 121
Query: 201 DK 202
DK
Sbjct: 122 DK 123
Score = 77.0 bits (188), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 37/64 (57%), Positives = 43/64 (67%), Gaps = 1/64 (1%)
Query: 1 MNAILNKNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIYMCDKHKQKPATIASKRMFD 60
+NAILN D K C +Y SLFPCNECAK IIQSGI ++Y DK+ TIASKRM
Sbjct: 80 LNAILNSKH-DLKGCSIYVSLFPCNECAKAIIQSGISRIVYESDKYAHTEGTIASKRMLR 138
Query: 61 AAKV 64
+A V
Sbjct: 139 SAGV 142
>gi|255540237|ref|XP_002511183.1| deoxycytidylate deaminase, putative [Ricinus communis]
gi|223550298|gb|EEF51785.1| deoxycytidylate deaminase, putative [Ricinus communis]
Length = 224
Score = 147 bits (372), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 72/132 (54%), Positives = 92/132 (69%), Gaps = 8/132 (6%)
Query: 81 PHKRVDDVLEWHEYFMASAFLVAKRSKDPVTRVGAVIVNEDNKIVGTGYNGMPIGCSDDE 140
P KR + L W +YFMA AFL A+RSKDP +VGA +V+++ I+G GYNG P GCSDD+
Sbjct: 55 PAKR-KEYLSWDDYFMAIAFLSAERSKDPNRQVGACLVSQNGVILGIGYNGFPRGCSDDK 113
Query: 141 FPWDK--NTHDELD-----MCHAEMNAILNKNSADTKRCKLYTSLFPCNECAKVIIQSGI 193
PW K T + L+ +CHAE+NAILN N A KLY ++FPCNECAK+IIQSG+
Sbjct: 114 LPWAKKSKTGNPLETKYPYVCHAEVNAILNTNHASAAGQKLYVTMFPCNECAKIIIQSGV 173
Query: 194 KEVIYMCDKQMS 205
EVIY +K +S
Sbjct: 174 SEVIYFVEKNLS 185
Score = 68.6 bits (166), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 34/78 (43%), Positives = 48/78 (61%), Gaps = 2/78 (2%)
Query: 1 MNAILNKNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIYMCDKH--KQKPATIASKRM 58
+NAILN N A KLY ++FPCNECAK+IIQSG+ EVIY +K+ + A IAS ++
Sbjct: 138 VNAILNTNHASAAGQKLYVTMFPCNECAKIIIQSGVSEVIYFVEKNLSNSETAYIASHKL 197
Query: 59 FDAAKVHYWSEMDKMNGV 76
A + +M+ +
Sbjct: 198 LSMAGIKVRRHQPQMSQI 215
>gi|154482616|ref|ZP_02025064.1| hypothetical protein EUBVEN_00283 [Eubacterium ventriosum ATCC
27560]
gi|149736516|gb|EDM52402.1| cytidine and deoxycytidylate deaminase zinc-binding region
[Eubacterium ventriosum ATCC 27560]
Length = 163
Score = 147 bits (372), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 69/121 (57%), Positives = 85/121 (70%), Gaps = 5/121 (4%)
Query: 87 DVLEWHEYFMASAFLVAKRSKDPVTRVGAVIVNEDNKIVGTGYNGMPIGCSDDEFPWDKN 146
D + W EYFM A L A RSKDP T+VGA IV++DNKI+ GYNG+P+GCSDDEFPW++
Sbjct: 8 DYISWDEYFMGVASLAALRSKDPNTQVGACIVSDDNKILSMGYNGLPVGCSDDEFPWNRE 67
Query: 147 THDELD-----MCHAEMNAILNKNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIYMCD 201
+ D D H+E+NAILN + K+Y +LFPCNECAK IIQ GIK+VIY D
Sbjct: 68 SDDPYDNKYFYTTHSELNAILNYRGGSLEGAKIYVTLFPCNECAKAIIQCGIKKVIYGDD 127
Query: 202 K 202
K
Sbjct: 128 K 128
Score = 73.2 bits (178), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 36/66 (54%), Positives = 43/66 (65%)
Query: 1 MNAILNKNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIYMCDKHKQKPATIASKRMFD 60
+NAILN + K+Y +LFPCNECAK IIQ GIK+VIY DK+ + ASKRM
Sbjct: 84 LNAILNYRGGSLEGAKIYVTLFPCNECAKAIIQCGIKKVIYGDDKYGDTSSVKASKRMMA 143
Query: 61 AAKVHY 66
AA V Y
Sbjct: 144 AAGVEY 149
>gi|325679436|ref|ZP_08159020.1| cytidine and deoxycytidylate deaminase zinc-binding region
[Ruminococcus albus 8]
gi|324108864|gb|EGC03096.1| cytidine and deoxycytidylate deaminase zinc-binding region
[Ruminococcus albus 8]
Length = 159
Score = 147 bits (372), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 74/125 (59%), Positives = 90/125 (72%), Gaps = 7/125 (5%)
Query: 83 KRVDDVLEWHEYFMASAFLVAKRSKDPVTRVGAVIVNEDNKIVGTGYNGMPIGCSDDEFP 142
K+ + + W +YF+ A L A RSKDP T+VGA IV+E+NKI+ GYNGMP GC+DDE P
Sbjct: 2 KKRMNYISWDDYFLGIAELSAARSKDPNTQVGACIVSEENKILSVGYNGMPAGCNDDEMP 61
Query: 143 WDKNTHDELD-----MCHAEMNAILNKNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVI 197
W + D LD +CHAE+NA+LN N D K ++Y SLFPCNECAK IIQSGIKEVI
Sbjct: 62 WGRKG-DFLDTKYPFVCHAELNAVLNSNH-DLKGSRIYVSLFPCNECAKAIIQSGIKEVI 119
Query: 198 YMCDK 202
Y CDK
Sbjct: 120 YTCDK 124
Score = 79.0 bits (193), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 40/64 (62%), Positives = 45/64 (70%), Gaps = 1/64 (1%)
Query: 1 MNAILNKNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIYMCDKHKQKPATIASKRMFD 60
+NA+LN N D K ++Y SLFPCNECAK IIQSGIKEVIY CDK+ T ASK MF
Sbjct: 81 LNAVLNSNH-DLKGSRIYVSLFPCNECAKAIIQSGIKEVIYTCDKYADTDGTKASKMMFK 139
Query: 61 AAKV 64
A V
Sbjct: 140 MAGV 143
>gi|302823271|ref|XP_002993289.1| hypothetical protein SELMODRAFT_136875 [Selaginella moellendorffii]
gi|300138862|gb|EFJ05614.1| hypothetical protein SELMODRAFT_136875 [Selaginella moellendorffii]
Length = 192
Score = 147 bits (372), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 68/122 (55%), Positives = 87/122 (71%), Gaps = 7/122 (5%)
Query: 89 LEWHEYFMASAFLVAKRSKDPVTRVGAVIVNEDNKIVGTGYNGMPIGCSDDEFPWDKNTH 148
L W +YFM+ AFL A+RSKDP+ +VGA +V++D I+G GYNG P GCSDD+ PW K +
Sbjct: 2 LSWDDYFMSIAFLSAQRSKDPIRQVGACLVSQDYVILGIGYNGFPRGCSDDKLPWAKKSR 61
Query: 149 DE-------LDMCHAEMNAILNKNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIYMCD 201
D +CHAE+NAILN+N A +LY ++FPCNECAKVIIQ+GI EVI+ D
Sbjct: 62 DGDLLKTKYPYVCHAEVNAILNRNHASASGQRLYVTMFPCNECAKVIIQAGIAEVIFYTD 121
Query: 202 KQ 203
KQ
Sbjct: 122 KQ 123
Score = 65.5 bits (158), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 32/65 (49%), Positives = 42/65 (64%), Gaps = 1/65 (1%)
Query: 1 MNAILNKNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIYMCDKHKQKPATI-ASKRMF 59
+NAILN+N A +LY ++FPCNECAKVIIQ+GI EVI+ DK AS+++
Sbjct: 78 VNAILNRNHASASGQRLYVTMFPCNECAKVIIQAGIAEVIFYTDKQSHPNFQFTASRKLL 137
Query: 60 DAAKV 64
A V
Sbjct: 138 SMANV 142
>gi|297819466|ref|XP_002877616.1| cytidine/deoxycytidylate deaminase family protein [Arabidopsis
lyrata subsp. lyrata]
gi|297323454|gb|EFH53875.1| cytidine/deoxycytidylate deaminase family protein [Arabidopsis
lyrata subsp. lyrata]
Length = 232
Score = 147 bits (372), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 72/132 (54%), Positives = 93/132 (70%), Gaps = 8/132 (6%)
Query: 80 SPHKRVDDVLEWHEYFMASAFLVAKRSKDPVTRVGAVIVNEDNKIVGTGYNGMPIGCSDD 139
SP KR + L W +YFMA AFL A+RSKDP +VGA +V+++ I+G GYNG P GCSDD
Sbjct: 58 SPLKR-NGYLSWDDYFMAIAFLSAERSKDPNRQVGACLVSQNGVILGIGYNGFPRGCSDD 116
Query: 140 EFPWDK--NTHDELD-----MCHAEMNAILNKNSADTKRCKLYTSLFPCNECAKVIIQSG 192
+ PW K T D L+ +CHAE+NAILN N A KLY ++FPCNECAK+I+QSG
Sbjct: 117 KLPWAKKSRTGDPLETKYPYVCHAEVNAILNTNHASAAGQKLYVTMFPCNECAKIILQSG 176
Query: 193 IKEVIYMCDKQM 204
+ EVIY +K++
Sbjct: 177 VAEVIYFVEKRL 188
Score = 66.6 bits (161), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 35/78 (44%), Positives = 48/78 (61%), Gaps = 5/78 (6%)
Query: 1 MNAILNKNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIYMCDKHKQKP--ATIASKRM 58
+NAILN N A KLY ++FPCNECAK+I+QSG+ EVIY +K A +AS ++
Sbjct: 142 VNAILNTNHASAAGQKLYVTMFPCNECAKIILQSGVAEVIYFVEKRLNDSDVAYVASHKL 201
Query: 59 FDAAKV---HYWSEMDKM 73
A V + EMD++
Sbjct: 202 LSMANVKVRKHQPEMDQI 219
>gi|238917857|ref|YP_002931374.1| dCMP deaminase [Eubacterium eligens ATCC 27750]
gi|238873217|gb|ACR72927.1| dCMP deaminase [Eubacterium eligens ATCC 27750]
Length = 159
Score = 147 bits (372), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 68/118 (57%), Positives = 82/118 (69%), Gaps = 2/118 (1%)
Query: 87 DVLEWHEYFMASAFLVAKRSKDPVTRVGAVIVNEDNKIVGTGYNGMPIGCSDDEFPWDKN 146
D + W EYFM A L RSKDP T+VGA IV++DNKI+ GYNG+P GCSDDEFPW+++
Sbjct: 7 DYISWDEYFMGIATLSGMRSKDPNTQVGACIVSQDNKILSMGYNGLPRGCSDDEFPWNRD 66
Query: 147 THDE--LDMCHAEMNAILNKNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIYMCDK 202
D H+E+NAILN KLY +LFPCNECAK IIQ+GIK V+Y CDK
Sbjct: 67 GEDNKYFYTTHSELNAILNYRGGSLDNAKLYVTLFPCNECAKAIIQAGIKTVVYDCDK 124
Score = 84.0 bits (206), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 38/67 (56%), Positives = 46/67 (68%)
Query: 1 MNAILNKNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIYMCDKHKQKPATIASKRMFD 60
+NAILN KLY +LFPCNECAK IIQ+GIK V+Y CDK+ + IASKRM +
Sbjct: 80 LNAILNYRGGSLDNAKLYVTLFPCNECAKAIIQAGIKTVVYDCDKYADTASVIASKRMLN 139
Query: 61 AAKVHYW 67
AA V Y+
Sbjct: 140 AAGVRYY 146
>gi|302772701|ref|XP_002969768.1| hypothetical protein SELMODRAFT_6274 [Selaginella moellendorffii]
gi|300162279|gb|EFJ28892.1| hypothetical protein SELMODRAFT_6274 [Selaginella moellendorffii]
Length = 147
Score = 147 bits (371), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 69/123 (56%), Positives = 88/123 (71%), Gaps = 9/123 (7%)
Query: 89 LEWHEYFMASAFLVAKRSKDPVTRVGAVIVNEDNKIVGTGYNGMPIGCSDDEFPWDKNTH 148
L W +YFM+ AFL A+RSKDP+ +VGA +V++D I+G GYNG P GCSDD+ PW K +
Sbjct: 2 LSWDDYFMSIAFLSAQRSKDPIRQVGACLVSQDYVILGIGYNGFPRGCSDDKLPWAKKSR 61
Query: 149 DELDM--------CHAEMNAILNKNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIYMC 200
D D+ CHAE+NAILN+N A +LY ++FPCNECAKVIIQ+GI EVI+
Sbjct: 62 DG-DLLKTKYPYVCHAEVNAILNRNHASASGQRLYVTMFPCNECAKVIIQAGIAEVIFYT 120
Query: 201 DKQ 203
DKQ
Sbjct: 121 DKQ 123
Score = 65.9 bits (159), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 32/65 (49%), Positives = 42/65 (64%), Gaps = 1/65 (1%)
Query: 1 MNAILNKNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIYMCDKHKQKPATI-ASKRMF 59
+NAILN+N A +LY ++FPCNECAKVIIQ+GI EVI+ DK AS+++
Sbjct: 78 VNAILNRNHASASGQRLYVTMFPCNECAKVIIQAGIAEVIFYTDKQSHPDFQFTASRKLL 137
Query: 60 DAAKV 64
A V
Sbjct: 138 SMANV 142
>gi|116831274|gb|ABK28591.1| unknown [Arabidopsis thaliana]
Length = 233
Score = 147 bits (371), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 76/154 (49%), Positives = 100/154 (64%), Gaps = 10/154 (6%)
Query: 57 RMFDAAKVHYWSEMDKMNGVQNGSPHKRVDDVLEWHEYFMASAFLVAKRSKDPVTRVGAV 116
R F + ++ S K + SP KR + L W +YFMA AFL A+RSKDP +VGA
Sbjct: 37 RKFTSTEISAISR--KFPALDPFSPLKR-NGYLSWDDYFMAIAFLSAERSKDPNRQVGAC 93
Query: 117 IVNEDNKIVGTGYNGMPIGCSDDEFPWDK--NTHDELD-----MCHAEMNAILNKNSADT 169
+V+++ I+G GYNG P GCSDD+ PW K T D L+ +CHAE+NAILN N A
Sbjct: 94 LVSQNGVILGIGYNGFPRGCSDDKLPWAKKSRTGDPLETKYPYVCHAEVNAILNTNHASA 153
Query: 170 KRCKLYTSLFPCNECAKVIIQSGIKEVIYMCDKQ 203
KLY ++FPCNECAK+I+QSG+ EVIY +K+
Sbjct: 154 AGQKLYVTMFPCNECAKIILQSGVAEVIYFVEKR 187
Score = 67.0 bits (162), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 35/78 (44%), Positives = 48/78 (61%), Gaps = 5/78 (6%)
Query: 1 MNAILNKNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIYMCDKHKQKP--ATIASKRM 58
+NAILN N A KLY ++FPCNECAK+I+QSG+ EVIY +K A +AS ++
Sbjct: 142 VNAILNTNHASAAGQKLYVTMFPCNECAKIILQSGVAEVIYFVEKRPNDSDVAYVASHKL 201
Query: 59 FDAAKV---HYWSEMDKM 73
A V + EMD++
Sbjct: 202 LSMANVKVRKHQPEMDEI 219
>gi|42565719|ref|NP_190423.2| dCMP deaminase [Arabidopsis thaliana]
gi|91806546|gb|ABE66000.1| cytidine/deoxycytidylate deaminase family protein [Arabidopsis
thaliana]
gi|332644907|gb|AEE78428.1| dCMP deaminase [Arabidopsis thaliana]
Length = 232
Score = 147 bits (371), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 76/154 (49%), Positives = 100/154 (64%), Gaps = 10/154 (6%)
Query: 57 RMFDAAKVHYWSEMDKMNGVQNGSPHKRVDDVLEWHEYFMASAFLVAKRSKDPVTRVGAV 116
R F + ++ S K + SP KR + L W +YFMA AFL A+RSKDP +VGA
Sbjct: 37 RKFTSTEISAISR--KFPALDPFSPLKR-NGYLSWDDYFMAIAFLSAERSKDPNRQVGAC 93
Query: 117 IVNEDNKIVGTGYNGMPIGCSDDEFPWDK--NTHDELD-----MCHAEMNAILNKNSADT 169
+V+++ I+G GYNG P GCSDD+ PW K T D L+ +CHAE+NAILN N A
Sbjct: 94 LVSQNGVILGIGYNGFPRGCSDDKLPWAKKSRTGDPLETKYPYVCHAEVNAILNTNHASA 153
Query: 170 KRCKLYTSLFPCNECAKVIIQSGIKEVIYMCDKQ 203
KLY ++FPCNECAK+I+QSG+ EVIY +K+
Sbjct: 154 AGQKLYVTMFPCNECAKIILQSGVAEVIYFVEKR 187
Score = 67.0 bits (162), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 35/78 (44%), Positives = 48/78 (61%), Gaps = 5/78 (6%)
Query: 1 MNAILNKNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIYMCDKHKQKP--ATIASKRM 58
+NAILN N A KLY ++FPCNECAK+I+QSG+ EVIY +K A +AS ++
Sbjct: 142 VNAILNTNHASAAGQKLYVTMFPCNECAKIILQSGVAEVIYFVEKRPNDSDVAYVASHKL 201
Query: 59 FDAAKV---HYWSEMDKM 73
A V + EMD++
Sbjct: 202 LSMANVKVRKHQPEMDEI 219
>gi|118483842|gb|ABK93812.1| unknown [Populus trichocarpa]
Length = 229
Score = 147 bits (370), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 71/131 (54%), Positives = 91/131 (69%), Gaps = 8/131 (6%)
Query: 81 PHKRVDDVLEWHEYFMASAFLVAKRSKDPVTRVGAVIVNEDNKIVGTGYNGMPIGCSDDE 140
P KR + L W +YFMA AFL A+RSKDP +VGA +V+++ I+G GYNG P GCSDD+
Sbjct: 62 PSKR-KEYLSWDDYFMAIAFLSAERSKDPNRQVGACLVSQNGIILGIGYNGFPRGCSDDK 120
Query: 141 FPWDKNTH--DELD-----MCHAEMNAILNKNSADTKRCKLYTSLFPCNECAKVIIQSGI 193
PW K + D L+ +CHAE+NAILN N A KLY ++FPCNECAK+IIQSG+
Sbjct: 121 LPWAKKSKSGDPLETKYPYVCHAEVNAILNTNHASAAGQKLYVTMFPCNECAKIIIQSGV 180
Query: 194 KEVIYMCDKQM 204
EVIY +K +
Sbjct: 181 SEVIYFVEKNL 191
Score = 67.8 bits (164), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 34/78 (43%), Positives = 47/78 (60%), Gaps = 2/78 (2%)
Query: 1 MNAILNKNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIYMCDKHKQKP--ATIASKRM 58
+NAILN N A KLY ++FPCNECAK+IIQSG+ EVIY +K+ A IAS ++
Sbjct: 145 VNAILNTNHASAAGQKLYVTMFPCNECAKIIIQSGVSEVIYFVEKNLNNSDIAYIASHKL 204
Query: 59 FDAAKVHYWSEMDKMNGV 76
A + +M+ +
Sbjct: 205 LSMAGIKVRKRQPRMDQI 222
>gi|260587372|ref|ZP_05853285.1| putative deoxycytidylate deaminase [Blautia hansenii DSM 20583]
gi|331083672|ref|ZP_08332783.1| hypothetical protein HMPREF0992_01707 [Lachnospiraceae bacterium
6_1_63FAA]
gi|260542239|gb|EEX22808.1| putative deoxycytidylate deaminase [Blautia hansenii DSM 20583]
gi|330403883|gb|EGG83435.1| hypothetical protein HMPREF0992_01707 [Lachnospiraceae bacterium
6_1_63FAA]
Length = 161
Score = 147 bits (370), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 69/122 (56%), Positives = 85/122 (69%), Gaps = 6/122 (4%)
Query: 86 DDVLEWHEYFMASAFLVAKRSKDPVTRVGAVIVNEDNKIVGTGYNGMPIGCSDDEFPWDK 145
D + W EYFM A L RSKDP ++VGA IV++DNKI+ GYNG P+GCSDDEFPW +
Sbjct: 6 DGYISWDEYFMGVAKLSGMRSKDPNSQVGACIVSQDNKILSMGYNGFPMGCSDDEFPWAR 65
Query: 146 NTHDELD-----MCHAEMNAILNKNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIYMC 200
+ELD + H+E+NAILN + KLY SLFPCNECAK IIQ+GIK ++Y C
Sbjct: 66 EG-EELDTKYFYVTHSELNAILNYRGGSLEGAKLYVSLFPCNECAKAIIQAGIKTIVYEC 124
Query: 201 DK 202
DK
Sbjct: 125 DK 126
Score = 85.9 bits (211), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 39/67 (58%), Positives = 46/67 (68%)
Query: 1 MNAILNKNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIYMCDKHKQKPATIASKRMFD 60
+NAILN + KLY SLFPCNECAK IIQ+GIK ++Y CDK+ A ASKRM D
Sbjct: 82 LNAILNYRGGSLEGAKLYVSLFPCNECAKAIIQAGIKTIVYECDKYADSAAVKASKRMLD 141
Query: 61 AAKVHYW 67
AA V Y+
Sbjct: 142 AAGVRYY 148
>gi|373493994|ref|ZP_09584600.1| hypothetical protein HMPREF0380_00238 [Eubacterium infirmum F0142]
gi|371969128|gb|EHO86579.1| hypothetical protein HMPREF0380_00238 [Eubacterium infirmum F0142]
Length = 160
Score = 146 bits (369), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 69/121 (57%), Positives = 83/121 (68%), Gaps = 5/121 (4%)
Query: 87 DVLEWHEYFMASAFLVAKRSKDPVTRVGAVIVNEDNKIVGTGYNGMPIGCSDDEFPWDKN 146
D + W EYFM A L RSKDP T+VGA IV++DNKI+ GYNG P GCSDDEFPW ++
Sbjct: 5 DYITWDEYFMGVAALSGMRSKDPNTQVGACIVSDDNKILSMGYNGFPKGCSDDEFPWARS 64
Query: 147 THDELDM-----CHAEMNAILNKNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIYMCD 201
+ D L + HAE+NAILN + KLY +LFPCNECAK IIQ+GIK V+Y D
Sbjct: 65 SDDALGIKYLYVTHAELNAILNYRGGSLEGAKLYVTLFPCNECAKAIIQAGIKTVVYGSD 124
Query: 202 K 202
K
Sbjct: 125 K 125
Score = 75.9 bits (185), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 36/64 (56%), Positives = 44/64 (68%)
Query: 1 MNAILNKNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIYMCDKHKQKPATIASKRMFD 60
+NAILN + KLY +LFPCNECAK IIQ+GIK V+Y DK+ + AT ASK MF
Sbjct: 81 LNAILNYRGGSLEGAKLYVTLFPCNECAKAIIQAGIKTVVYGSDKYADESATKASKLMFK 140
Query: 61 AAKV 64
A+ V
Sbjct: 141 ASGV 144
>gi|315923999|ref|ZP_07920227.1| deoxycytidylate deaminase [Pseudoramibacter alactolyticus ATCC
23263]
gi|315622839|gb|EFV02792.1| deoxycytidylate deaminase [Pseudoramibacter alactolyticus ATCC
23263]
Length = 165
Score = 146 bits (369), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 71/121 (58%), Positives = 84/121 (69%), Gaps = 6/121 (4%)
Query: 87 DVLEWHEYFMASAFLVAKRSKDPVTRVGAVIVNEDNKIVGTGYNGMPIGCSDDEFPWDKN 146
D L W +YFM A L A+RSKDP T+VGA IV+ +NKI+ GYNGMPIGCSDDE PW +
Sbjct: 11 DYLSWDQYFMGIALLSAQRSKDPGTQVGACIVSPENKILSMGYNGMPIGCSDDEMPWARE 70
Query: 147 THDELD-----MCHAEMNAILNKNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIYMCD 201
D LD +CHAE NAILN + + LY +LFPCNEC K IIQ GIK+V+YM D
Sbjct: 71 G-DPLDTKYLYVCHAEFNAILNSGAKTLQGATLYVTLFPCNECTKAIIQCGIKKVVYMED 129
Query: 202 K 202
K
Sbjct: 130 K 130
Score = 71.6 bits (174), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 34/66 (51%), Positives = 42/66 (63%)
Query: 1 MNAILNKNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIYMCDKHKQKPATIASKRMFD 60
NAILN + + LY +LFPCNEC K IIQ GIK+V+YM DK+ A IA+KRM +
Sbjct: 86 FNAILNSGAKTLQGATLYVTLFPCNECTKAIIQCGIKKVVYMEDKYPDSDAVIAAKRMMN 145
Query: 61 AAKVHY 66
V Y
Sbjct: 146 MTGVVY 151
>gi|224136175|ref|XP_002322258.1| predicted protein [Populus trichocarpa]
gi|222869254|gb|EEF06385.1| predicted protein [Populus trichocarpa]
Length = 229
Score = 146 bits (369), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 71/131 (54%), Positives = 91/131 (69%), Gaps = 8/131 (6%)
Query: 81 PHKRVDDVLEWHEYFMASAFLVAKRSKDPVTRVGAVIVNEDNKIVGTGYNGMPIGCSDDE 140
P KR + L W +YFMA AFL A+RSKDP +VGA +V+++ I+G GYNG P GCSDD+
Sbjct: 62 PSKR-KEYLSWDDYFMAIAFLSAERSKDPNRQVGACLVSQNGIILGIGYNGFPRGCSDDK 120
Query: 141 FPWDKNTH--DELD-----MCHAEMNAILNKNSADTKRCKLYTSLFPCNECAKVIIQSGI 193
PW K + D L+ +CHAE+NAILN N A KLY ++FPCNECAK+IIQSG+
Sbjct: 121 LPWAKKSKSGDPLETKYPYVCHAEVNAILNTNHASAAGQKLYVTMFPCNECAKIIIQSGV 180
Query: 194 KEVIYMCDKQM 204
EVIY +K +
Sbjct: 181 SEVIYFVEKNL 191
Score = 67.4 bits (163), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 34/78 (43%), Positives = 47/78 (60%), Gaps = 2/78 (2%)
Query: 1 MNAILNKNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIYMCDKHKQKP--ATIASKRM 58
+NAILN N A KLY ++FPCNECAK+IIQSG+ EVIY +K+ A IAS ++
Sbjct: 145 VNAILNTNHASAAGQKLYVTMFPCNECAKIIIQSGVSEVIYFVEKNLNNSDIAYIASHKL 204
Query: 59 FDAAKVHYWSEMDKMNGV 76
A + +M+ +
Sbjct: 205 LSMAGIKVRKHQPRMDQI 222
>gi|326432789|gb|EGD78359.1| deoxycytidylate deaminase [Salpingoeca sp. ATCC 50818]
Length = 185
Score = 146 bits (369), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 68/117 (58%), Positives = 85/117 (72%), Gaps = 5/117 (4%)
Query: 91 WHEYFMASAFLVAKRSKDPVTRVGAVIVNEDNKIVGTGYNGMPIGCSDDEFPWDKNTHDE 150
W +YFMA AFL A+RSKDP ++ GA IVN +NKIVG GYNGMP GCSDD+ PW
Sbjct: 21 WEDYFMAVAFLSAQRSKDPESQFGACIVNSENKIVGIGYNGMPRGCSDDKLPWRSQGDSV 80
Query: 151 LD-----MCHAEMNAILNKNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIYMCDK 202
LD +C AEMNAILN+NS+ + C++Y FP NE AK+IIQ+GIKEV+Y+ D+
Sbjct: 81 LDTKYPFVCQAEMNAILNRNSSSIRGCRIYVMQFPDNESAKLIIQAGIKEVVYVADE 137
Score = 71.2 bits (173), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 32/64 (50%), Positives = 46/64 (71%)
Query: 1 MNAILNKNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIYMCDKHKQKPATIASKRMFD 60
MNAILN+NS+ + C++Y FP NE AK+IIQ+GIKEV+Y+ D+ +AS+R+F
Sbjct: 93 MNAILNRNSSSIRGCRIYVMQFPDNESAKLIIQAGIKEVVYVADEMHNATPYMASRRLFK 152
Query: 61 AAKV 64
A+V
Sbjct: 153 LARV 156
>gi|168065799|ref|XP_001784834.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162663588|gb|EDQ50344.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 162
Score = 146 bits (369), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 75/131 (57%), Positives = 90/131 (68%), Gaps = 9/131 (6%)
Query: 80 SPHKRVDDVLEWHEYFMASAFLVAKRSKDPVTRVGAVIVNEDNKIV-GTGYNGMPIGCSD 138
+P KR L W +YFMA AFL AKRSKDP +VGA IV++D I+ G GYNG P GCSD
Sbjct: 4 NPSKR-QGYLSWDDYFMAIAFLSAKRSKDPNRQVGACIVSQDRVILAGIGYNGFPRGCSD 62
Query: 139 DEFPWDKNTH--DELD-----MCHAEMNAILNKNSADTKRCKLYTSLFPCNECAKVIIQS 191
D+ PW K + D L +CHAE+NAILNKN A +LY +LFPCNECAK+IIQ+
Sbjct: 63 DQLPWAKKSQSGDPLQTKYPYVCHAEVNAILNKNHASASGQRLYVTLFPCNECAKIIIQA 122
Query: 192 GIKEVIYMCDK 202
GI EV+Y DK
Sbjct: 123 GIAEVVYYTDK 133
Score = 73.2 bits (178), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 35/73 (47%), Positives = 46/73 (63%), Gaps = 8/73 (10%)
Query: 1 MNAILNKNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIYMCDKHKQ--------KPAT 52
+NAILNKN A +LY +LFPCNECAK+IIQ+GI EV+Y DK +PA
Sbjct: 89 VNAILNKNHASASGQRLYVTLFPCNECAKIIIQAGIAEVVYYTDKGAHIENNAGGTEPAF 148
Query: 53 IASKRMFDAAKVH 65
+AS+R+ A +
Sbjct: 149 VASRRLLSMAGIR 161
>gi|160937837|ref|ZP_02085196.1| hypothetical protein CLOBOL_02729 [Clostridium bolteae ATCC
BAA-613]
gi|158439276|gb|EDP17029.1| hypothetical protein CLOBOL_02729 [Clostridium bolteae ATCC
BAA-613]
Length = 181
Score = 146 bits (369), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 71/127 (55%), Positives = 83/127 (65%), Gaps = 8/127 (6%)
Query: 83 KRVDDVLEWHEYFMASAFLVAKRSKDPVTRVGAVIVNEDNKIVGTGYNGMPIGCSDDEFP 142
KRVD + W EYFM A L +RSKDP T+VGA IV++DNKI+ GYNG P GCSDDEFP
Sbjct: 21 KRVD-YITWDEYFMGVALLSGRRSKDPSTQVGACIVSQDNKILSMGYNGFPKGCSDDEFP 79
Query: 143 WDKNTHDE-------LDMCHAEMNAILNKNSADTKRCKLYTSLFPCNECAKVIIQSGIKE 195
W K E H+E+NAILN + KLY +LFPCNECAK IIQSGIK
Sbjct: 80 WGKENEKEDPYNSKYFYSTHSELNAILNYRGGSLEGSKLYVTLFPCNECAKAIIQSGIKT 139
Query: 196 VIYMCDK 202
++Y DK
Sbjct: 140 IVYREDK 146
Score = 84.3 bits (207), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 38/67 (56%), Positives = 47/67 (70%)
Query: 1 MNAILNKNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIYMCDKHKQKPATIASKRMFD 60
+NAILN + KLY +LFPCNECAK IIQSGIK ++Y DK+ PA +ASKRM +
Sbjct: 102 LNAILNYRGGSLEGSKLYVTLFPCNECAKAIIQSGIKTIVYREDKYADTPAVMASKRMLN 161
Query: 61 AAKVHYW 67
AA V Y+
Sbjct: 162 AAGVRYY 168
>gi|342215228|ref|ZP_08707883.1| cytidine and deoxycytidylate deaminase zinc-binding region
[Veillonella sp. oral taxon 780 str. F0422]
gi|341588851|gb|EGS32225.1| cytidine and deoxycytidylate deaminase zinc-binding region
[Veillonella sp. oral taxon 780 str. F0422]
Length = 159
Score = 146 bits (368), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 66/118 (55%), Positives = 84/118 (71%), Gaps = 3/118 (2%)
Query: 87 DVLEWHEYFMASAFLVAKRSKDPVTRVGAVIVNEDNKIVGTGYNGMPIGCSDDEFPWDKN 146
D + W EYFM A L +RSKDP T+VGA IV++DNKI+ GYNGMP+GC DD+F W++N
Sbjct: 6 DYISWDEYFMGVAMLAGQRSKDPNTQVGACIVSDDNKILSIGYNGMPLGCDDDDFSWNRN 65
Query: 147 THDE---LDMCHAEMNAILNKNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIYMCD 201
++ + H+E+NAILN + K+Y +LFPCNECAK IIQSGIKEVIY D
Sbjct: 66 REEDNKYFYIVHSELNAILNYRGGSLEGSKIYVTLFPCNECAKAIIQSGIKEVIYWRD 123
Score = 75.1 bits (183), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 36/64 (56%), Positives = 42/64 (65%)
Query: 1 MNAILNKNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIYMCDKHKQKPATIASKRMFD 60
+NAILN + K+Y +LFPCNECAK IIQSGIKEVIY D +K ASKR+F
Sbjct: 80 LNAILNYRGGSLEGSKIYVTLFPCNECAKAIIQSGIKEVIYWRDDYKDTREVQASKRLFQ 139
Query: 61 AAKV 64
A V
Sbjct: 140 TAGV 143
>gi|358068016|ref|ZP_09154488.1| hypothetical protein HMPREF9333_01369 [Johnsonella ignava ATCC
51276]
gi|356693985|gb|EHI55654.1| hypothetical protein HMPREF9333_01369 [Johnsonella ignava ATCC
51276]
Length = 164
Score = 146 bits (368), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 69/124 (55%), Positives = 83/124 (66%), Gaps = 7/124 (5%)
Query: 86 DDVLEWHEYFMASAFLVAKRSKDPVTRVGAVIVNEDNKIVGTGYNGMPIGCSDDEFPWDK 145
D+ + W EYFM A L AKRSKDP T+VGA IV+ DNKI+ GYNG P GCSDDEFPW K
Sbjct: 6 DNYITWDEYFMGVAALSAKRSKDPSTQVGACIVSSDNKILSMGYNGFPRGCSDDEFPWGK 65
Query: 146 NTHDE-------LDMCHAEMNAILNKNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIY 198
++ E L H E+NAILN + KLY +LFPCNECAK IIQ+GI+ ++Y
Sbjct: 66 DSQAEDPYNAKYLYSTHGELNAILNYRGTSLEGSKLYVTLFPCNECAKAIIQAGIRTIVY 125
Query: 199 MCDK 202
DK
Sbjct: 126 ADDK 129
Score = 74.3 bits (181), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 33/67 (49%), Positives = 44/67 (65%)
Query: 1 MNAILNKNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIYMCDKHKQKPATIASKRMFD 60
+NAILN + KLY +LFPCNECAK IIQ+GI+ ++Y DK+ ASKRM +
Sbjct: 85 LNAILNYRGTSLEGSKLYVTLFPCNECAKAIIQAGIRTIVYADDKYADTDVVRASKRMLN 144
Query: 61 AAKVHYW 67
+A V Y+
Sbjct: 145 SAGVRYY 151
>gi|253581046|ref|ZP_04858307.1| conserved hypothetical protein [Ruminococcus sp. 5_1_39B_FAA]
gi|251847709|gb|EES75678.1| conserved hypothetical protein [Ruminococcus sp. 5_1_39BFAA]
Length = 163
Score = 146 bits (368), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 72/126 (57%), Positives = 85/126 (67%), Gaps = 7/126 (5%)
Query: 82 HKRVDDVLEWHEYFMASAFLVAKRSKDPVTRVGAVIVNEDNKIVGTGYNGMPIGCSDDEF 141
HKR D L W EYFM A + RSKDP ++VGA IV+EDNKI+ GYNG P GCSDDEF
Sbjct: 5 HKRTD-YLSWDEYFMGVAMMSGMRSKDPNSQVGACIVSEDNKILSMGYNGFPKGCSDDEF 63
Query: 142 PWDKNTHDELD-----MCHAEMNAILNKNSADTKRCKLYTSLFPCNECAKVIIQSGIKEV 196
PW + D L + H+E+NAILN + KLY SLFPCNECAK IIQ+GIK +
Sbjct: 64 PWAREG-DSLHTKYFYVTHSELNAILNYRGGSLEGAKLYVSLFPCNECAKAIIQAGIKTI 122
Query: 197 IYMCDK 202
+Y CDK
Sbjct: 123 VYDCDK 128
Score = 90.9 bits (224), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 41/67 (61%), Positives = 48/67 (71%)
Query: 1 MNAILNKNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIYMCDKHKQKPATIASKRMFD 60
+NAILN + KLY SLFPCNECAK IIQ+GIK ++Y CDK+ PA IASKRM D
Sbjct: 84 LNAILNYRGGSLEGAKLYVSLFPCNECAKAIIQAGIKTIVYDCDKYADTPAVIASKRMLD 143
Query: 61 AAKVHYW 67
AA V Y+
Sbjct: 144 AAGVRYY 150
>gi|325678499|ref|ZP_08158114.1| cytidine and deoxycytidylate deaminase zinc-binding region
[Ruminococcus albus 8]
gi|324109810|gb|EGC04011.1| cytidine and deoxycytidylate deaminase zinc-binding region
[Ruminococcus albus 8]
Length = 248
Score = 146 bits (368), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 74/125 (59%), Positives = 90/125 (72%), Gaps = 7/125 (5%)
Query: 83 KRVDDVLEWHEYFMASAFLVAKRSKDPVTRVGAVIVNEDNKIVGTGYNGMPIGCSDDEFP 142
K+ + + W +YF+ A L A RSKDP T+VGA IV+E+NKI+ GYNGMP GC+DDE P
Sbjct: 2 KKRMNYISWDDYFLGIAELSAARSKDPNTQVGACIVSEENKILSLGYNGMPAGCNDDEMP 61
Query: 143 WDKNTHDELD-----MCHAEMNAILNKNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVI 197
W + D LD +CHAE+NA+LN N D K ++Y SLFPCNECAK IIQSGIKEVI
Sbjct: 62 WGREG-DFLDTKYPFVCHAELNAVLNSNH-DLKGSRIYVSLFPCNECAKAIIQSGIKEVI 119
Query: 198 YMCDK 202
Y CDK
Sbjct: 120 YTCDK 124
Score = 79.0 bits (193), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 40/64 (62%), Positives = 45/64 (70%), Gaps = 1/64 (1%)
Query: 1 MNAILNKNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIYMCDKHKQKPATIASKRMFD 60
+NA+LN N D K ++Y SLFPCNECAK IIQSGIKEVIY CDK+ T ASK MF
Sbjct: 81 LNAVLNSNH-DLKGSRIYVSLFPCNECAKAIIQSGIKEVIYTCDKYADTDGTKASKMMFK 139
Query: 61 AAKV 64
A V
Sbjct: 140 MAGV 143
>gi|153853661|ref|ZP_01995041.1| hypothetical protein DORLON_01032 [Dorea longicatena DSM 13814]
gi|149753816|gb|EDM63747.1| cytidine and deoxycytidylate deaminase zinc-binding region [Dorea
longicatena DSM 13814]
Length = 162
Score = 145 bits (367), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 70/121 (57%), Positives = 82/121 (67%), Gaps = 5/121 (4%)
Query: 87 DVLEWHEYFMASAFLVAKRSKDPVTRVGAVIVNEDNKIVGTGYNGMPIGCSDDEFPWDKN 146
D + W EYFM A L RSKDP T+VG IV++DNKI+ GYNG+P GCSDD FPW +
Sbjct: 7 DYISWDEYFMGVAKLSGMRSKDPNTQVGCCIVSQDNKILSMGYNGLPTGCSDDVFPWGRE 66
Query: 147 THDELD-----MCHAEMNAILNKNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIYMCD 201
D L+ H+E+NAILN + KLY SLFPCNECAK IIQSGIKEVIY C+
Sbjct: 67 GDDPLETKYVYTVHSELNAILNYRGGSLEGAKLYVSLFPCNECAKAIIQSGIKEVIYDCN 126
Query: 202 K 202
K
Sbjct: 127 K 127
Score = 86.7 bits (213), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 41/66 (62%), Positives = 49/66 (74%)
Query: 1 MNAILNKNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIYMCDKHKQKPATIASKRMFD 60
+NAILN + KLY SLFPCNECAK IIQSGIKEVIY C+K++ A +AS +MFD
Sbjct: 83 LNAILNYRGGSLEGAKLYVSLFPCNECAKAIIQSGIKEVIYDCNKYEGTAAVMASMKMFD 142
Query: 61 AAKVHY 66
AA V+Y
Sbjct: 143 AAGVNY 148
>gi|195128985|ref|XP_002008939.1| GI13764 [Drosophila mojavensis]
gi|193920548|gb|EDW19415.1| GI13764 [Drosophila mojavensis]
Length = 189
Score = 145 bits (367), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 71/140 (50%), Positives = 96/140 (68%), Gaps = 8/140 (5%)
Query: 71 DKMNGVQN--GSPHKRVDDVLEWHEYFMASAFLVAKRSKDPVTRVGAVIVNEDNKIVGTG 128
D++ ++N + +++ D L W +YFMA+A L +KRSKDP T+VGA +V+ N+IV G
Sbjct: 11 DRVESIENLTSTHNQKRKDYLPWDDYFMATAILSSKRSKDPSTQVGACVVDNHNRIVAIG 70
Query: 129 YNGMPIGCSDDEFPW----DKNT--HDELDMCHAEMNAILNKNSADTKRCKLYTSLFPCN 182
YNG P CSDDEFPW DKN+ + + + HAE NAILN N +LYT+LFPCN
Sbjct: 71 YNGFPRNCSDDEFPWSKDEDKNSMKNKYMYVVHAEANAILNSNCTALDGTRLYTTLFPCN 130
Query: 183 ECAKVIIQSGIKEVIYMCDK 202
EC K+IIQSGI+E+ Y+ DK
Sbjct: 131 ECTKLIIQSGIREIYYLSDK 150
Score = 81.3 bits (199), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 35/65 (53%), Positives = 46/65 (70%)
Query: 2 NAILNKNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIYMCDKHKQKPATIASKRMFDA 61
NAILN N +LYT+LFPCNEC K+IIQSGI+E+ Y+ DK++ KP A++RM DA
Sbjct: 107 NAILNSNCTALDGTRLYTTLFPCNECTKLIIQSGIREIYYLSDKYRDKPVYQAARRMLDA 166
Query: 62 AKVHY 66
+ Y
Sbjct: 167 VGIAY 171
>gi|391335389|ref|XP_003742076.1| PREDICTED: deoxycytidylate deaminase-like [Metaseiulus
occidentalis]
Length = 175
Score = 145 bits (367), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 69/128 (53%), Positives = 88/128 (68%), Gaps = 5/128 (3%)
Query: 81 PHKRVDDVLEWHEYFMASAFLVAKRSKDPVTRVGAVIVNEDNKIVGTGYNGMPIGCSDDE 140
P ++ DD L W +YFM+ A + A RSKDP T+VGA I+ + K+VG GYNGMPIGC DD
Sbjct: 9 PERKRDDFLRWEDYFMSLASISAMRSKDPNTQVGAAIITAEFKVVGLGYNGMPIGCHDDI 68
Query: 141 FPWDKNTHDELD-----MCHAEMNAILNKNSADTKRCKLYTSLFPCNECAKVIIQSGIKE 195
PW K D + +CHAEMNAI+NKN+ D +YT+ FPCNECAK+IIQS IK
Sbjct: 69 MPWGKMGSDLSETKYGFVCHAEMNAIMNKNTHDISGSTMYTTHFPCNECAKLIIQSRIKR 128
Query: 196 VIYMCDKQ 203
V+Y+ K+
Sbjct: 129 VVYLHHKK 136
Score = 73.6 bits (179), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 34/64 (53%), Positives = 44/64 (68%)
Query: 1 MNAILNKNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIYMCDKHKQKPATIASKRMFD 60
MNAI+NKN+ D +YT+ FPCNECAK+IIQS IK V+Y+ K Q P +A+ +FD
Sbjct: 91 MNAIMNKNTHDISGSTMYTTHFPCNECAKLIIQSRIKRVVYLHHKKPQDPIYVAAAFLFD 150
Query: 61 AAKV 64
A V
Sbjct: 151 TAGV 154
>gi|239623208|ref|ZP_04666239.1| conserved hypothetical protein [Clostridiales bacterium 1_7_47_FAA]
gi|239522174|gb|EEQ62040.1| conserved hypothetical protein [Clostridiales bacterium 1_7_47FAA]
Length = 164
Score = 145 bits (367), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 68/123 (55%), Positives = 81/123 (65%), Gaps = 7/123 (5%)
Query: 87 DVLEWHEYFMASAFLVAKRSKDPVTRVGAVIVNEDNKIVGTGYNGMPIGCSDDEFPWDKN 146
D + W EYFM A L +RSKDP T+VGA IV++DNKI+ GYNG P GCSDDEFPW K
Sbjct: 7 DYITWDEYFMGVALLSGRRSKDPSTQVGACIVSQDNKILSMGYNGFPKGCSDDEFPWGKE 66
Query: 147 THDE-------LDMCHAEMNAILNKNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIYM 199
+E H+E+NAILN + KLY +LFPCNECAK IIQ+GIK +IY
Sbjct: 67 KQEEDPYNSKYFYSTHSELNAILNYRGGSLEGSKLYVTLFPCNECAKAIIQAGIKTIIYG 126
Query: 200 CDK 202
DK
Sbjct: 127 EDK 129
Score = 83.2 bits (204), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 38/67 (56%), Positives = 47/67 (70%)
Query: 1 MNAILNKNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIYMCDKHKQKPATIASKRMFD 60
+NAILN + KLY +LFPCNECAK IIQ+GIK +IY DK+ + PA ASKRM +
Sbjct: 85 LNAILNYRGGSLEGSKLYVTLFPCNECAKAIIQAGIKTIIYGEDKYAETPAVRASKRMLN 144
Query: 61 AAKVHYW 67
AA V Y+
Sbjct: 145 AAGVRYY 151
>gi|167520965|ref|XP_001744821.1| hypothetical protein [Monosiga brevicollis MX1]
gi|163776435|gb|EDQ90054.1| predicted protein [Monosiga brevicollis MX1]
Length = 143
Score = 145 bits (367), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 67/122 (54%), Positives = 86/122 (70%), Gaps = 5/122 (4%)
Query: 86 DDVLEWHEYFMASAFLVAKRSKDPVTRVGAVIVNEDNKIVGTGYNGMPIGCSDDEFPWDK 145
+D + ++M+ A L AKRSKDP T+VG I+N D +V GYNG PIGCSD E PW K
Sbjct: 3 EDYISKECWYMSMAMLAAKRSKDPNTQVGCTIINPDGIVVSMGYNGFPIGCSDQELPWQK 62
Query: 146 NTHDELD-----MCHAEMNAILNKNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIYMC 200
++ + L+ +CHAEMNAILN N + C LY +LFPCNECAK+IIQ+GI EV+Y+C
Sbjct: 63 HSANPLETKFPYVCHAEMNAILNTNDESVRGCTLYATLFPCNECAKMIIQAGIVEVVYLC 122
Query: 201 DK 202
DK
Sbjct: 123 DK 124
Score = 84.7 bits (208), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 37/60 (61%), Positives = 45/60 (75%)
Query: 1 MNAILNKNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIYMCDKHKQKPATIASKRMFD 60
MNAILN N + C LY +LFPCNECAK+IIQ+GI EV+Y+CDK + KP AS+ MFD
Sbjct: 80 MNAILNTNDESVRGCTLYATLFPCNECAKMIIQAGIVEVVYLCDKSRDKPLVQASRHMFD 139
>gi|195495983|ref|XP_002095501.1| GE19654 [Drosophila yakuba]
gi|194181602|gb|EDW95213.1| GE19654 [Drosophila yakuba]
Length = 199
Score = 145 bits (367), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 73/137 (53%), Positives = 90/137 (65%), Gaps = 11/137 (8%)
Query: 76 VQNGSPHKRVDDVLEWHEYFMASAFLVAKRSKDPVTRVGAVIVNEDNKIVGTGYNGMPIG 135
+++ HKR D L W +YFMA++ L AKRSKDPVT+VGA IV+ N+IV GYNG P
Sbjct: 10 IESPENHKR-KDYLHWDDYFMATSLLSAKRSKDPVTQVGACIVDSQNRIVAIGYNGFPRN 68
Query: 136 CSDDEFPWDK-----NTHDELD-----MCHAEMNAILNKNSADTKRCKLYTSLFPCNECA 185
CSDD FPW K D L+ + HAE NAILN N +LYT+LFPCNECA
Sbjct: 69 CSDDVFPWSKAKKGAQDFDPLEDKKMYVVHAEANAILNTNGMSLTGTRLYTTLFPCNECA 128
Query: 186 KVIIQSGIKEVIYMCDK 202
K+IIQ GI +V+Y+ DK
Sbjct: 129 KLIIQVGISQVLYLSDK 145
Score = 81.6 bits (200), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 38/69 (55%), Positives = 46/69 (66%)
Query: 2 NAILNKNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIYMCDKHKQKPATIASKRMFDA 61
NAILN N +LYT+LFPCNECAK+IIQ GI +V+Y+ DK+ KP ASKRM +A
Sbjct: 102 NAILNTNGMSLTGTRLYTTLFPCNECAKLIIQVGISQVLYLSDKYADKPTYRASKRMLEA 161
Query: 62 AKVHYWSEM 70
V Y M
Sbjct: 162 VGVGYKRHM 170
>gi|293376240|ref|ZP_06622483.1| cytidine and deoxycytidylate deaminase zinc-binding region
[Turicibacter sanguinis PC909]
gi|292645132|gb|EFF63199.1| cytidine and deoxycytidylate deaminase zinc-binding region
[Turicibacter sanguinis PC909]
Length = 157
Score = 145 bits (367), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 71/122 (58%), Positives = 87/122 (71%), Gaps = 7/122 (5%)
Query: 86 DDVLEWHEYFMASAFLVAKRSKDPVTRVGAVIVNEDNKIVGTGYNGMPIGCSDDEFPWDK 145
++ L W EYFM A L A RSKDP T+VGA IVNE+++IVG GYNG P GC D+EFPW++
Sbjct: 3 ENYLSWDEYFMGIALLSAMRSKDPQTQVGACIVNEEHRIVGIGYNGFPHGCKDEEFPWER 62
Query: 146 -----NTHDELDMCHAEMNAILNKNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIYMC 200
NT + HAE NAILN ++ K C+LY SLFPC+ECAK IIQSGI E++YM
Sbjct: 63 EGEFINTKYPY-VVHAEQNAILNSTTS-LKHCRLYVSLFPCHECAKYIIQSGINEIVYMS 120
Query: 201 DK 202
DK
Sbjct: 121 DK 122
Score = 85.1 bits (209), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 40/65 (61%), Positives = 49/65 (75%), Gaps = 1/65 (1%)
Query: 2 NAILNKNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIYMCDKHKQKPATIASKRMFDA 61
NAILN ++ K C+LY SLFPC+ECAK IIQSGI E++YM DK+ +T+ASKRM DA
Sbjct: 80 NAILNSTTS-LKHCRLYVSLFPCHECAKYIIQSGINEIVYMSDKYAHTDSTLASKRMLDA 138
Query: 62 AKVHY 66
A V Y
Sbjct: 139 AGVKY 143
>gi|166033064|ref|ZP_02235893.1| hypothetical protein DORFOR_02786 [Dorea formicigenerans ATCC
27755]
gi|166027421|gb|EDR46178.1| cytidine and deoxycytidylate deaminase zinc-binding region [Dorea
formicigenerans ATCC 27755]
Length = 162
Score = 145 bits (367), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 71/121 (58%), Positives = 82/121 (67%), Gaps = 5/121 (4%)
Query: 87 DVLEWHEYFMASAFLVAKRSKDPVTRVGAVIVNEDNKIVGTGYNGMPIGCSDDEFPWDKN 146
D + W EYFM A L RSKDP T+VG IV++DNKI+ GYNG+P GCSDDEFPW +
Sbjct: 7 DYINWDEYFMGVAKLSGLRSKDPNTQVGCCIVSQDNKILSMGYNGLPKGCSDDEFPWVRE 66
Query: 147 THDELD-----MCHAEMNAILNKNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIYMCD 201
D L H+E+NAILN + KLY SLFPCNECAK IIQSGIKEVIY C+
Sbjct: 67 GEDPLKTKYVYTVHSELNAILNFRGGSLEGAKLYVSLFPCNECAKAIIQSGIKEVIYDCN 126
Query: 202 K 202
K
Sbjct: 127 K 127
Score = 84.7 bits (208), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 42/66 (63%), Positives = 46/66 (69%)
Query: 1 MNAILNKNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIYMCDKHKQKPATIASKRMFD 60
+NAILN + KLY SLFPCNECAK IIQSGIKEVIY C+K+ A AS RMFD
Sbjct: 83 LNAILNFRGGSLEGAKLYVSLFPCNECAKAIIQSGIKEVIYDCNKYDGSTAVQASMRMFD 142
Query: 61 AAKVHY 66
AA V Y
Sbjct: 143 AAGVAY 148
>gi|295109528|emb|CBL23481.1| Deoxycytidylate deaminase [Ruminococcus obeum A2-162]
Length = 164
Score = 145 bits (367), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 70/124 (56%), Positives = 83/124 (66%), Gaps = 4/124 (3%)
Query: 83 KRVDDVLEWHEYFMASAFLVAKRSKDPVTRVGAVIVNEDNKIVGTGYNGMPIGCSDDEFP 142
++ D + W EYFM A L RSKDP ++VGA IV+EDNKI+ GYNG P GCSDDEFP
Sbjct: 6 QKRQDYISWDEYFMGVAMLSGMRSKDPNSQVGACIVSEDNKILSMGYNGFPKGCSDDEFP 65
Query: 143 WDKNTH----DELDMCHAEMNAILNKNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIY 198
W + L + H+E+NAILN + KLY SLFPCNECAK IIQ+GIK VIY
Sbjct: 66 WAREGEPLDTKYLYVTHSELNAILNYRGGSLEGAKLYVSLFPCNECAKAIIQAGIKTVIY 125
Query: 199 MCDK 202
CDK
Sbjct: 126 DCDK 129
Score = 90.9 bits (224), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 42/67 (62%), Positives = 49/67 (73%)
Query: 1 MNAILNKNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIYMCDKHKQKPATIASKRMFD 60
+NAILN + KLY SLFPCNECAK IIQ+GIK VIY CDK++ P+ IASKRM D
Sbjct: 85 LNAILNYRGGSLEGAKLYVSLFPCNECAKAIIQAGIKTVIYDCDKYEHTPSVIASKRMMD 144
Query: 61 AAKVHYW 67
AA V Y+
Sbjct: 145 AAGVRYY 151
>gi|194874728|ref|XP_001973453.1| GG16092 [Drosophila erecta]
gi|190655236|gb|EDV52479.1| GG16092 [Drosophila erecta]
Length = 199
Score = 145 bits (367), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 73/132 (55%), Positives = 88/132 (66%), Gaps = 12/132 (9%)
Query: 82 HKRVDDVLEWHEYFMASAFLVAKRSKDPVTRVGAVIVNEDNKIVGTGYNGMPIGCSDDEF 141
HKR D L W +YFMA++ L AKRSKDPVT+VGA IV+ N+IV GYNG P CSDD F
Sbjct: 16 HKR-KDYLHWDDYFMATSLLSAKRSKDPVTQVGACIVDSRNRIVAIGYNGFPRNCSDDVF 74
Query: 142 PWD----KNTHD-------ELDMCHAEMNAILNKNSADTKRCKLYTSLFPCNECAKVIIQ 190
PW K HD +L + HAE NAILN +LYT+LFPCNECAK+IIQ
Sbjct: 75 PWSKAKKKRAHDFDPLEDKKLYVVHAEANAILNSIGMSLTGTRLYTTLFPCNECAKLIIQ 134
Query: 191 SGIKEVIYMCDK 202
+GI +V+Y+ DK
Sbjct: 135 AGISQVLYLSDK 146
Score = 80.9 bits (198), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 37/65 (56%), Positives = 45/65 (69%)
Query: 2 NAILNKNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIYMCDKHKQKPATIASKRMFDA 61
NAILN +LYT+LFPCNECAK+IIQ+GI +V+Y+ DK+ KP ASKRM DA
Sbjct: 103 NAILNSIGMSLTGTRLYTTLFPCNECAKLIIQAGISQVLYLSDKYADKPTYRASKRMLDA 162
Query: 62 AKVHY 66
V Y
Sbjct: 163 VGVEY 167
>gi|358066132|ref|ZP_09152666.1| hypothetical protein HMPREF9473_04729 [Clostridium hathewayi
WAL-18680]
gi|356695995|gb|EHI57620.1| hypothetical protein HMPREF9473_04729 [Clostridium hathewayi
WAL-18680]
Length = 164
Score = 145 bits (367), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 72/124 (58%), Positives = 85/124 (68%), Gaps = 9/124 (7%)
Query: 87 DVLEWHEYFMASAFLVAKRSKDPVTRVGAVIVNEDNKIVGTGYNGMPIGCSDDEFPWDKN 146
+ + W EYFM A L A+RSKDP T+VGA IV+EDNKI+ GYNG P GCSDDEFPWDK
Sbjct: 7 EYITWDEYFMGVARLSAQRSKDPSTQVGACIVSEDNKILSMGYNGFPKGCSDDEFPWDK- 65
Query: 147 THDELD--------MCHAEMNAILNKNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIY 198
TH+ D H+E+NAILN + KLY +LFPCNECAK IIQ+GIK +IY
Sbjct: 66 THEADDPYNAKYFYSTHSELNAILNYRGGSLEGSKLYVTLFPCNECAKAIIQAGIKTLIY 125
Query: 199 MCDK 202
DK
Sbjct: 126 GEDK 129
Score = 81.3 bits (199), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 38/67 (56%), Positives = 46/67 (68%)
Query: 1 MNAILNKNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIYMCDKHKQKPATIASKRMFD 60
+NAILN + KLY +LFPCNECAK IIQ+GIK +IY DK+ PA ASKRM +
Sbjct: 85 LNAILNYRGGSLEGSKLYVTLFPCNECAKAIIQAGIKTLIYGEDKYADTPAVRASKRMLN 144
Query: 61 AAKVHYW 67
AA V Y+
Sbjct: 145 AAGVRYY 151
>gi|266619532|ref|ZP_06112467.1| putative deoxycytidylate deaminase [Clostridium hathewayi DSM
13479]
gi|288868943|gb|EFD01242.1| putative deoxycytidylate deaminase [Clostridium hathewayi DSM
13479]
Length = 166
Score = 145 bits (367), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 70/128 (54%), Positives = 86/128 (67%), Gaps = 9/128 (7%)
Query: 83 KRVDDVLEWHEYFMASAFLVAKRSKDPVTRVGAVIVNEDNKIVGTGYNGMPIGCSDDEFP 142
++ +D + W EYFM A L KRSKDP T+VGA IV++DNKI+ GYNG P GCSDDEFP
Sbjct: 5 EKREDYITWDEYFMGVAMLSGKRSKDPSTQVGACIVSQDNKILSMGYNGFPKGCSDDEFP 64
Query: 143 WDKNTHDELD--------MCHAEMNAILNKNSADTKRCKLYTSLFPCNECAKVIIQSGIK 194
W K H++ D H+E+NAILN + KLY +LFPCNECAK IIQSGIK
Sbjct: 65 WGKE-HEKDDPYNAKYFYSTHSELNAILNYRGGSLEGSKLYVTLFPCNECAKAIIQSGIK 123
Query: 195 EVIYMCDK 202
++Y DK
Sbjct: 124 TIVYGSDK 131
Score = 83.2 bits (204), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 38/67 (56%), Positives = 46/67 (68%)
Query: 1 MNAILNKNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIYMCDKHKQKPATIASKRMFD 60
+NAILN + KLY +LFPCNECAK IIQSGIK ++Y DK+ PA ASKRM +
Sbjct: 87 LNAILNYRGGSLEGSKLYVTLFPCNECAKAIIQSGIKTIVYGSDKYDGTPAVNASKRMLN 146
Query: 61 AAKVHYW 67
AA V Y+
Sbjct: 147 AAGVRYY 153
>gi|294793764|ref|ZP_06758901.1| probable deoxycytidylate deaminase [Veillonella sp. 3_1_44]
gi|294455334|gb|EFG23706.1| probable deoxycytidylate deaminase [Veillonella sp. 3_1_44]
Length = 159
Score = 145 bits (366), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 67/118 (56%), Positives = 84/118 (71%), Gaps = 3/118 (2%)
Query: 87 DVLEWHEYFMASAFLVAKRSKDPVTRVGAVIVNEDNKIVGTGYNGMPIGCSDDEFPWDKN 146
D + W+EYFM A L A+RSKDP T+VGA IV+ DNKI+ GYNGMP+ CSDD+F W+++
Sbjct: 6 DYISWNEYFMGVAILAAQRSKDPNTQVGACIVSNDNKILSIGYNGMPLNCSDDDFTWERD 65
Query: 147 THDE---LDMCHAEMNAILNKNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIYMCD 201
T D+ H+E+NAILN + K+Y +LFPCNECAK IIQSGIK VIY D
Sbjct: 66 TADDNKYFYTVHSELNAILNYRGGSLEGSKIYVTLFPCNECAKAIIQSGIKAVIYRDD 123
Score = 70.1 bits (170), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 35/64 (54%), Positives = 40/64 (62%)
Query: 1 MNAILNKNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIYMCDKHKQKPATIASKRMFD 60
+NAILN + K+Y +LFPCNECAK IIQSGIK VIY D +K ASKRM
Sbjct: 80 LNAILNYRGGSLEGSKIYVTLFPCNECAKAIIQSGIKAVIYRDDLYKDTKEVKASKRMLK 139
Query: 61 AAKV 64
A V
Sbjct: 140 TAGV 143
>gi|24667298|ref|NP_649197.1| CG6951, isoform A [Drosophila melanogaster]
gi|24667302|ref|NP_730502.1| CG6951, isoform B [Drosophila melanogaster]
gi|9296958|sp|Q9VWA2.1|DCTD_DROME RecName: Full=Probable deoxycytidylate deaminase; AltName:
Full=dCMP deaminase
gi|7293676|gb|AAF49046.1| CG6951, isoform A [Drosophila melanogaster]
gi|23093067|gb|AAN11625.1| CG6951, isoform B [Drosophila melanogaster]
gi|41058187|gb|AAR99137.1| RE06943p [Drosophila melanogaster]
gi|220950846|gb|ACL87966.1| CG6951-PA [synthetic construct]
gi|220959594|gb|ACL92340.1| CG6951-PA [synthetic construct]
gi|442734452|gb|AGC65512.1| RE15346p1 [Drosophila melanogaster]
Length = 203
Score = 145 bits (365), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 72/131 (54%), Positives = 87/131 (66%), Gaps = 11/131 (8%)
Query: 82 HKRVDDVLEWHEYFMASAFLVAKRSKDPVTRVGAVIVNEDNKIVGTGYNGMPIGCSDDEF 141
HKR + L W +YFMA++ L AKRSKDPVT+VGA IV+ N+IV GYNG P CSDD F
Sbjct: 20 HKR-KEYLHWDDYFMATSLLSAKRSKDPVTQVGACIVDSQNRIVAIGYNGFPRNCSDDVF 78
Query: 142 PWDK-----NTHDELD-----MCHAEMNAILNKNSADTKRCKLYTSLFPCNECAKVIIQS 191
PW K D L+ + HAE NAILN N +LYT+LFPCNECAK+IIQ
Sbjct: 79 PWSKAKKGSQEFDPLEDKKMYVVHAEANAILNSNGMSLSGTRLYTTLFPCNECAKLIIQV 138
Query: 192 GIKEVIYMCDK 202
GI +V+Y+ DK
Sbjct: 139 GISQVLYLSDK 149
Score = 83.6 bits (205), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 38/65 (58%), Positives = 45/65 (69%)
Query: 2 NAILNKNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIYMCDKHKQKPATIASKRMFDA 61
NAILN N +LYT+LFPCNECAK+IIQ GI +V+Y+ DK+ KP ASKRM DA
Sbjct: 106 NAILNSNGMSLSGTRLYTTLFPCNECAKLIIQVGISQVLYLSDKYADKPTYRASKRMLDA 165
Query: 62 AKVHY 66
V Y
Sbjct: 166 VGVEY 170
>gi|402834269|ref|ZP_10882872.1| cytidine and deoxycytidylate deaminase zinc-binding region
[Selenomonas sp. CM52]
gi|402278565|gb|EJU27624.1| cytidine and deoxycytidylate deaminase zinc-binding region
[Selenomonas sp. CM52]
Length = 163
Score = 145 bits (365), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 74/120 (61%), Positives = 84/120 (70%), Gaps = 7/120 (5%)
Query: 88 VLEWHEYFMASAFLVAKRSKDPVTRVGAVIVNEDNKIVGTGYNGMPIGCSDDEFPWDKNT 147
++ W EYFM A RSKDP T+VGA IVNED IVG GYNGMP GCSD EFPW +T
Sbjct: 2 IISWDEYFMGIALFSKYRSKDPHTQVGACIVNEDKHIVGVGYNGMPNGCSDAEFPWG-ST 60
Query: 148 HDELD-----MCHAEMNAILNKNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIYMCDK 202
+ D + HAE+NAILN S K C++YTSLFPCNEC K IIQSGIKEVIY+ DK
Sbjct: 61 GEFGDKKYAYVVHAELNAILNA-STSLKGCRIYTSLFPCNECCKAIIQSGIKEVIYLSDK 119
Score = 89.0 bits (219), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 44/66 (66%), Positives = 50/66 (75%), Gaps = 1/66 (1%)
Query: 1 MNAILNKNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIYMCDKHKQKPATIASKRMFD 60
+NAILN S K C++YTSLFPCNEC K IIQSGIKEVIY+ DK+ +T ASKRMF
Sbjct: 76 LNAILNA-STSLKGCRIYTSLFPCNECCKAIIQSGIKEVIYLSDKYAATDSTRASKRMFA 134
Query: 61 AAKVHY 66
AA VHY
Sbjct: 135 AAGVHY 140
>gi|160914266|ref|ZP_02076487.1| hypothetical protein EUBDOL_00276 [Eubacterium dolichum DSM 3991]
gi|158433893|gb|EDP12182.1| cytidine and deoxycytidylate deaminase zinc-binding region
[Eubacterium dolichum DSM 3991]
Length = 170
Score = 145 bits (365), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 72/124 (58%), Positives = 86/124 (69%), Gaps = 13/124 (10%)
Query: 87 DVLEWHEYFMASAFLVAKRSKDPVTRVGAVIVNEDNKIVGTGYNGMPIGCSDDEFPWDKN 146
DVL W EYFM A L AKRSKDP T+VGA IVN+ +K+V GYNG P GC DD+FPW++
Sbjct: 14 DVLTWDEYFMGLAHLSAKRSKDPNTQVGAAIVNDQHKVVSIGYNGFPNGCHDDDFPWER- 72
Query: 147 THDELDMC--------HAEMNAILNKNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIY 198
E D C HAE+NAILN +S + + C +Y SLFPCNECAK IIQSGI+ V+Y
Sbjct: 73 ---EGDFCATKYPYVVHAELNAILN-SSTNLQGCSIYVSLFPCNECAKAIIQSGIRRVVY 128
Query: 199 MCDK 202
DK
Sbjct: 129 ESDK 132
Score = 78.2 bits (191), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 38/64 (59%), Positives = 46/64 (71%), Gaps = 1/64 (1%)
Query: 1 MNAILNKNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIYMCDKHKQKPATIASKRMFD 60
+NAILN +S + + C +Y SLFPCNECAK IIQSGI+ V+Y DK+ TIASKRM
Sbjct: 89 LNAILN-SSTNLQGCSIYVSLFPCNECAKAIIQSGIRRVVYESDKYADTDGTIASKRMLK 147
Query: 61 AAKV 64
AA V
Sbjct: 148 AAGV 151
>gi|225573949|ref|ZP_03782594.1| hypothetical protein RUMHYD_02043 [Blautia hydrogenotrophica DSM
10507]
gi|225038808|gb|EEG49054.1| cytidine and deoxycytidylate deaminase zinc-binding region [Blautia
hydrogenotrophica DSM 10507]
Length = 164
Score = 145 bits (365), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 67/124 (54%), Positives = 84/124 (67%), Gaps = 4/124 (3%)
Query: 83 KRVDDVLEWHEYFMASAFLVAKRSKDPVTRVGAVIVNEDNKIVGTGYNGMPIGCSDDEFP 142
++ D + W EYFM A L RSKDP ++VGA IV+EDNKI+ GYNG PIGCSDD+FP
Sbjct: 6 RKRSDYITWDEYFMGVAQLAGMRSKDPSSQVGACIVSEDNKILSMGYNGFPIGCSDDDFP 65
Query: 143 WDKNTHD----ELDMCHAEMNAILNKNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIY 198
W + + L + H+E+NAILN + KLY +LFPCNECAK IIQSGIK ++Y
Sbjct: 66 WAREGEELETKYLYVTHSELNAILNYRGGSLEGAKLYVTLFPCNECAKAIIQSGIKTIVY 125
Query: 199 MCDK 202
DK
Sbjct: 126 GNDK 129
Score = 87.0 bits (214), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 39/67 (58%), Positives = 47/67 (70%)
Query: 1 MNAILNKNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIYMCDKHKQKPATIASKRMFD 60
+NAILN + KLY +LFPCNECAK IIQSGIK ++Y DK+ PA IASKRM D
Sbjct: 85 LNAILNYRGGSLEGAKLYVTLFPCNECAKAIIQSGIKTIVYGNDKYANTPAVIASKRMLD 144
Query: 61 AAKVHYW 67
A+ V Y+
Sbjct: 145 ASGVRYY 151
>gi|260886275|ref|ZP_05897538.1| putative deoxycytidylate deaminase [Selenomonas sputigena ATCC
35185]
gi|330839740|ref|YP_004414320.1| dCMP deaminase [Selenomonas sputigena ATCC 35185]
gi|260863994|gb|EEX78494.1| putative deoxycytidylate deaminase [Selenomonas sputigena ATCC
35185]
gi|329747504|gb|AEC00861.1| dCMP deaminase [Selenomonas sputigena ATCC 35185]
Length = 163
Score = 145 bits (365), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 74/120 (61%), Positives = 84/120 (70%), Gaps = 7/120 (5%)
Query: 88 VLEWHEYFMASAFLVAKRSKDPVTRVGAVIVNEDNKIVGTGYNGMPIGCSDDEFPWDKNT 147
++ W EYFM A RSKDP T+VGA IVNED IVG GYNGMP GCSD EFPW +T
Sbjct: 2 IISWDEYFMGIALFSKYRSKDPHTQVGACIVNEDKHIVGVGYNGMPNGCSDAEFPWG-ST 60
Query: 148 HDELD-----MCHAEMNAILNKNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIYMCDK 202
+ D + HAE+NAILN S K C++YTSLFPCNEC K IIQSGIKEVIY+ DK
Sbjct: 61 GEFGDKKYAYVVHAELNAILNA-STSLKGCRIYTSLFPCNECCKAIIQSGIKEVIYLSDK 119
Score = 89.0 bits (219), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 44/66 (66%), Positives = 50/66 (75%), Gaps = 1/66 (1%)
Query: 1 MNAILNKNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIYMCDKHKQKPATIASKRMFD 60
+NAILN S K C++YTSLFPCNEC K IIQSGIKEVIY+ DK+ +T ASKRMF
Sbjct: 76 LNAILNA-STSLKGCRIYTSLFPCNECCKAIIQSGIKEVIYLSDKYAATDSTRASKRMFA 134
Query: 61 AAKVHY 66
AA VHY
Sbjct: 135 AAGVHY 140
>gi|255283094|ref|ZP_05347649.1| putative deoxycytidylate deaminase [Bryantella formatexigens DSM
14469]
gi|255266396|gb|EET59601.1| cytidine and deoxycytidylate deaminase zinc-binding region
[Marvinbryantia formatexigens DSM 14469]
Length = 160
Score = 145 bits (365), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 67/120 (55%), Positives = 80/120 (66%), Gaps = 4/120 (3%)
Query: 87 DVLEWHEYFMASAFLVAKRSKDPVTRVGAVIVNEDNKIVGTGYNGMPIGCSDDEFPWDKN 146
D + W EYFM A L RSKDP T+VGA IV+ DNKI+ GYNG PIGCSDD+FPW++
Sbjct: 6 DYISWDEYFMGVAMLSGMRSKDPNTQVGACIVSSDNKILSMGYNGFPIGCSDDDFPWERE 65
Query: 147 TH----DELDMCHAEMNAILNKNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIYMCDK 202
L H+E+NAILN LY SLFPCNECAK IIQ+GIK+++Y CDK
Sbjct: 66 GEALDTKYLYTTHSELNAILNYRGGSLDGATLYVSLFPCNECAKAIIQAGIKQIVYDCDK 125
Score = 77.4 bits (189), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 34/66 (51%), Positives = 43/66 (65%)
Query: 1 MNAILNKNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIYMCDKHKQKPATIASKRMFD 60
+NAILN LY SLFPCNECAK IIQ+GIK+++Y CDK+ + +ASKRM
Sbjct: 81 LNAILNYRGGSLDGATLYVSLFPCNECAKAIIQAGIKQIVYDCDKYADTASVLASKRMLT 140
Query: 61 AAKVHY 66
A V +
Sbjct: 141 TAGVKF 146
>gi|257437839|ref|ZP_05613594.1| putative deoxycytidylate deaminase [Faecalibacterium prausnitzii
A2-165]
gi|257199499|gb|EEU97783.1| cytidine and deoxycytidylate deaminase zinc-binding region
[Faecalibacterium prausnitzii A2-165]
Length = 168
Score = 145 bits (365), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 69/121 (57%), Positives = 84/121 (69%), Gaps = 6/121 (4%)
Query: 87 DVLEWHEYFMASAFLVAKRSKDPVTRVGAVIVNEDNKIVGTGYNGMPIGCSDDEFPWDKN 146
D + W EYFM A L A RSKDP ++VGA IV+ +NKI+ GYNGMPIGC DD PW++
Sbjct: 14 DYINWDEYFMGIALLTAMRSKDPSSQVGACIVSPENKILSLGYNGMPIGCDDDAMPWERE 73
Query: 147 THDELD-----MCHAEMNAILNKNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIYMCD 201
D LD +CHAE+NAILN + K ++Y +LFPCNECAK IIQSGI EV+Y D
Sbjct: 74 G-DPLDTKYMYVCHAELNAILNSAHNNLKGARVYVTLFPCNECAKAIIQSGISEVVYYGD 132
Query: 202 K 202
K
Sbjct: 133 K 133
Score = 71.2 bits (173), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 32/64 (50%), Positives = 44/64 (68%)
Query: 1 MNAILNKNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIYMCDKHKQKPATIASKRMFD 60
+NAILN + K ++Y +LFPCNECAK IIQSGI EV+Y DK+ +++A++ MF
Sbjct: 89 LNAILNSAHNNLKGARVYVTLFPCNECAKAIIQSGISEVVYYGDKYHDSDSSVAARFMFK 148
Query: 61 AAKV 64
A V
Sbjct: 149 KAGV 152
>gi|310779654|ref|YP_003967987.1| CMP/dCMP deaminase zinc-binding protein [Ilyobacter polytropus DSM
2926]
gi|309748977|gb|ADO83639.1| CMP/dCMP deaminase zinc-binding protein [Ilyobacter polytropus DSM
2926]
Length = 165
Score = 145 bits (365), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 75/127 (59%), Positives = 90/127 (70%), Gaps = 11/127 (8%)
Query: 83 KRVDDVLEWHEYFMASAFLVAKRSKDPVTRVGAVIVNEDNKIVGTGYNGMPIGCSDDEFP 142
KR +D + W EYFM A L AKRSKDP T+VGA IVN++NKIVG GYNG P GCSDD FP
Sbjct: 3 KRREDYIGWDEYFMGIALLSAKRSKDPSTQVGACIVNKENKIVGVGYNGFPKGCSDDNFP 62
Query: 143 WDKNTHDELD-----MCHAEMNAILN--KNSADTKRCKLYTSLFPCNECAKVIIQSGIKE 195
WD+ + L+ + HAE NAILN K +D C +Y LFPC+ECAK IIQSGIKE
Sbjct: 63 WDREG-EFLETKYPFVMHAEQNAILNSIKKLSD---CTIYVGLFPCHECAKSIIQSGIKE 118
Query: 196 VIYMCDK 202
V+++ DK
Sbjct: 119 VVFLSDK 125
Score = 68.2 bits (165), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 36/67 (53%), Positives = 46/67 (68%), Gaps = 5/67 (7%)
Query: 2 NAILN--KNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIYMCDKHKQKPATIASKRMF 59
NAILN K +D C +Y LFPC+ECAK IIQSGIKEV+++ DK+ + ASK MF
Sbjct: 83 NAILNSIKKLSD---CTIYVGLFPCHECAKSIIQSGIKEVVFLSDKYDGTDSNKASKMMF 139
Query: 60 DAAKVHY 66
D++ V Y
Sbjct: 140 DSSGVVY 146
>gi|291548233|emb|CBL21341.1| Deoxycytidylate deaminase [Ruminococcus sp. SR1/5]
Length = 164
Score = 145 bits (365), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 69/119 (57%), Positives = 82/119 (68%), Gaps = 6/119 (5%)
Query: 89 LEWHEYFMASAFLVAKRSKDPVTRVGAVIVNEDNKIVGTGYNGMPIGCSDDEFPWDKNTH 148
L W EYFM A L RSKDP ++VGA IV+EDNKI+ GYNG P GCSDDEFPW +
Sbjct: 12 LSWDEYFMGVAMLSGMRSKDPHSQVGACIVSEDNKILSMGYNGFPKGCSDDEFPWGREG- 70
Query: 149 DELD-----MCHAEMNAILNKNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIYMCDK 202
D LD + H+E+NAILN + KLY SLFPCNECAK IIQ+GI+ ++Y CDK
Sbjct: 71 DPLDTKYLYVTHSELNAILNYRGGSLEGAKLYVSLFPCNECAKAIIQAGIRTIVYDCDK 129
Score = 87.4 bits (215), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 38/67 (56%), Positives = 48/67 (71%)
Query: 1 MNAILNKNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIYMCDKHKQKPATIASKRMFD 60
+NAILN + KLY SLFPCNECAK IIQ+GI+ ++Y CDK+ P+ IASK+M D
Sbjct: 85 LNAILNYRGGSLEGAKLYVSLFPCNECAKAIIQAGIRTIVYDCDKYADTPSVIASKKMLD 144
Query: 61 AAKVHYW 67
AA V Y+
Sbjct: 145 AAGVRYY 151
>gi|339441921|ref|YP_004707926.1| hypothetical protein CXIVA_08570 [Clostridium sp. SY8519]
gi|338901322|dbj|BAK46824.1| hypothetical protein CXIVA_08570 [Clostridium sp. SY8519]
Length = 162
Score = 144 bits (364), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 70/121 (57%), Positives = 82/121 (67%), Gaps = 5/121 (4%)
Query: 87 DVLEWHEYFMASAFLVAKRSKDPVTRVGAVIVNEDNKIVGTGYNGMPIGCSDDEFPWDKN 146
D + W EYFM A L A RSKDP T+VGA IV++DNKI+ GYNG P+GCSDD FPW +
Sbjct: 7 DYITWDEYFMGVAKLSAMRSKDPNTQVGACIVSQDNKILSMGYNGFPLGCSDDVFPWARE 66
Query: 147 THDELDM-----CHAEMNAILNKNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIYMCD 201
+ LD+ H+E+NAILN + KLY SLFPCNECAK IIQ GIK VIY D
Sbjct: 67 ADEPLDIKYLYSTHSELNAILNYRGGSLEGAKLYVSLFPCNECAKAIIQCGIKTVIYAED 126
Query: 202 K 202
K
Sbjct: 127 K 127
Score = 81.3 bits (199), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 39/67 (58%), Positives = 46/67 (68%)
Query: 1 MNAILNKNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIYMCDKHKQKPATIASKRMFD 60
+NAILN + KLY SLFPCNECAK IIQ GIK VIY DK++Q + IASKRM
Sbjct: 83 LNAILNYRGGSLEGAKLYVSLFPCNECAKAIIQCGIKTVIYAEDKYEQTASVIASKRMLK 142
Query: 61 AAKVHYW 67
AA V ++
Sbjct: 143 AAGVSFY 149
>gi|282850251|ref|ZP_06259630.1| cytidine and deoxycytidylate deaminase zinc-binding region
[Veillonella parvula ATCC 17745]
gi|282579744|gb|EFB85148.1| cytidine and deoxycytidylate deaminase zinc-binding region
[Veillonella parvula ATCC 17745]
Length = 159
Score = 144 bits (364), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 67/118 (56%), Positives = 83/118 (70%), Gaps = 3/118 (2%)
Query: 87 DVLEWHEYFMASAFLVAKRSKDPVTRVGAVIVNEDNKIVGTGYNGMPIGCSDDEFPWDKN 146
D + W EYFM A L A+RSKDP T+VGA IV+ DNKI+ GYNGMP+ CSDD+F W+++
Sbjct: 6 DYISWDEYFMGVAILAAQRSKDPNTQVGACIVSNDNKILSIGYNGMPLNCSDDDFTWERD 65
Query: 147 THDE---LDMCHAEMNAILNKNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIYMCD 201
T D+ H+E+NAILN + K+Y +LFPCNECAK IIQSGIK VIY D
Sbjct: 66 TADDNKYFYTVHSELNAILNYRGGSLEGSKIYVTLFPCNECAKAIIQSGIKAVIYRDD 123
Score = 70.5 bits (171), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 35/64 (54%), Positives = 40/64 (62%)
Query: 1 MNAILNKNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIYMCDKHKQKPATIASKRMFD 60
+NAILN + K+Y +LFPCNECAK IIQSGIK VIY D +K ASKRM
Sbjct: 80 LNAILNYRGGSLEGSKIYVTLFPCNECAKAIIQSGIKAVIYRDDLYKDTKEVKASKRMLK 139
Query: 61 AAKV 64
A V
Sbjct: 140 TAGV 143
>gi|302669645|ref|YP_003829605.1| deoxycytidylate deaminase [Butyrivibrio proteoclasticus B316]
gi|302394118|gb|ADL33023.1| deoxycytidylate deaminase [Butyrivibrio proteoclasticus B316]
Length = 170
Score = 144 bits (364), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 67/126 (53%), Positives = 86/126 (68%), Gaps = 5/126 (3%)
Query: 82 HKRVDDVLEWHEYFMASAFLVAKRSKDPVTRVGAVIVNEDNKIVGTGYNGMPIGCSDDEF 141
+ + +D + W EYFM A L A RSKDP T+VG+ IV+EDN I+ GYNG P GCSD+EF
Sbjct: 10 YMKREDYISWDEYFMGVAKLAAMRSKDPNTQVGSCIVSEDNNILSMGYNGFPKGCSDEEF 69
Query: 142 PWDKNTHDELD-----MCHAEMNAILNKNSADTKRCKLYTSLFPCNECAKVIIQSGIKEV 196
PW+++ DEL + H+E+NAILN K+Y SLFPCNECAK IIQ+GI+ V
Sbjct: 70 PWERDGEDELGTKYPFVTHSELNAILNYRGGSLVGAKIYVSLFPCNECAKAIIQAGIRTV 129
Query: 197 IYMCDK 202
+Y DK
Sbjct: 130 VYDSDK 135
Score = 80.9 bits (198), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 37/67 (55%), Positives = 46/67 (68%)
Query: 1 MNAILNKNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIYMCDKHKQKPATIASKRMFD 60
+NAILN K+Y SLFPCNECAK IIQ+GI+ V+Y DK+ +T ASK+MFD
Sbjct: 91 LNAILNYRGGSLVGAKIYVSLFPCNECAKAIIQAGIRTVVYDSDKYSTSASTRASKKMFD 150
Query: 61 AAKVHYW 67
AA V Y+
Sbjct: 151 AAGVRYY 157
>gi|325845138|ref|ZP_08168447.1| cytidine and deoxycytidylate deaminase zinc-binding region
[Turicibacter sp. HGF1]
gi|325488803|gb|EGC91203.1| cytidine and deoxycytidylate deaminase zinc-binding region
[Turicibacter sp. HGF1]
Length = 157
Score = 144 bits (364), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 70/122 (57%), Positives = 87/122 (71%), Gaps = 7/122 (5%)
Query: 86 DDVLEWHEYFMASAFLVAKRSKDPVTRVGAVIVNEDNKIVGTGYNGMPIGCSDDEFPWDK 145
++ L W EYFM A L + RSKDP T+VGA IVNE+++IVG GYNG P GC D+EFPW++
Sbjct: 3 ENYLSWDEYFMGIALLSSMRSKDPQTQVGACIVNEEHRIVGIGYNGFPHGCKDEEFPWER 62
Query: 146 -----NTHDELDMCHAEMNAILNKNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIYMC 200
NT + HAE NAILN ++ K C+LY SLFPC+ECAK IIQSGI E++YM
Sbjct: 63 EGEFINTKYPY-VVHAEQNAILNSTTS-LKHCRLYVSLFPCHECAKYIIQSGINEIVYMS 120
Query: 201 DK 202
DK
Sbjct: 121 DK 122
Score = 85.1 bits (209), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 40/65 (61%), Positives = 49/65 (75%), Gaps = 1/65 (1%)
Query: 2 NAILNKNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIYMCDKHKQKPATIASKRMFDA 61
NAILN ++ K C+LY SLFPC+ECAK IIQSGI E++YM DK+ +T+ASKRM DA
Sbjct: 80 NAILNSTTS-LKHCRLYVSLFPCHECAKYIIQSGINEIVYMSDKYAHTDSTLASKRMLDA 138
Query: 62 AKVHY 66
A V Y
Sbjct: 139 AGVKY 143
>gi|313115327|ref|ZP_07800802.1| cytidine and deoxycytidylate deaminase zinc-binding region
[Faecalibacterium cf. prausnitzii KLE1255]
gi|310622358|gb|EFQ05838.1| cytidine and deoxycytidylate deaminase zinc-binding region
[Faecalibacterium cf. prausnitzii KLE1255]
Length = 159
Score = 144 bits (364), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 69/121 (57%), Positives = 84/121 (69%), Gaps = 6/121 (4%)
Query: 87 DVLEWHEYFMASAFLVAKRSKDPVTRVGAVIVNEDNKIVGTGYNGMPIGCSDDEFPWDKN 146
D + W EYFM A L A RSKDP ++VGA IV+ +NKI+ GYNGMPIGCSDDE PW++
Sbjct: 5 DYINWDEYFMGIALLTAMRSKDPNSQVGACIVSSENKILSLGYNGMPIGCSDDEMPWERE 64
Query: 147 THDELD-----MCHAEMNAILNKNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIYMCD 201
LD +CHAE+NAILN + K ++Y +LFPCNEC K IIQSGI EV+Y D
Sbjct: 65 GA-PLDTKYMYVCHAELNAILNSAHNNLKGARVYVTLFPCNECTKAIIQSGIAEVVYYGD 123
Query: 202 K 202
K
Sbjct: 124 K 124
Score = 69.7 bits (169), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 31/64 (48%), Positives = 43/64 (67%)
Query: 1 MNAILNKNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIYMCDKHKQKPATIASKRMFD 60
+NAILN + K ++Y +LFPCNEC K IIQSGI EV+Y DK+ +++A++ MF
Sbjct: 80 LNAILNSAHNNLKGARVYVTLFPCNECTKAIIQSGIAEVVYYGDKYHDSDSSVAARFMFK 139
Query: 61 AAKV 64
A V
Sbjct: 140 KAGV 143
>gi|303231464|ref|ZP_07318195.1| cytidine and deoxycytidylate deaminase zinc-binding region
[Veillonella atypica ACS-049-V-Sch6]
gi|429759483|ref|ZP_19291981.1| cytidine and deoxycytidylate deaminase zinc-binding region
[Veillonella atypica KON]
gi|302513901|gb|EFL55912.1| cytidine and deoxycytidylate deaminase zinc-binding region
[Veillonella atypica ACS-049-V-Sch6]
gi|429179444|gb|EKY20691.1| cytidine and deoxycytidylate deaminase zinc-binding region
[Veillonella atypica KON]
Length = 159
Score = 144 bits (364), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 67/118 (56%), Positives = 83/118 (70%), Gaps = 3/118 (2%)
Query: 87 DVLEWHEYFMASAFLVAKRSKDPVTRVGAVIVNEDNKIVGTGYNGMPIGCSDDEFPWDKN 146
D + W EYFM A L A+RSKDP T+VGA IV+ DNKI+ GYNGMP+ CSDD+F W+++
Sbjct: 6 DYISWDEYFMGVAILAAQRSKDPNTQVGACIVSNDNKILSIGYNGMPLNCSDDDFTWERD 65
Query: 147 THDE---LDMCHAEMNAILNKNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIYMCD 201
T D+ H+E+NAILN + K+Y +LFPCNECAK IIQSGIK VIY D
Sbjct: 66 TADDNKYFYTVHSELNAILNYRGGSLEGSKIYVTLFPCNECAKAIIQSGIKAVIYRDD 123
Score = 70.5 bits (171), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 35/64 (54%), Positives = 40/64 (62%)
Query: 1 MNAILNKNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIYMCDKHKQKPATIASKRMFD 60
+NAILN + K+Y +LFPCNECAK IIQSGIK VIY D +K ASKRM
Sbjct: 80 LNAILNYRGGSLEGSKIYVTLFPCNECAKAIIQSGIKAVIYRDDLYKDTKEVKASKRMLK 139
Query: 61 AAKV 64
A V
Sbjct: 140 TAGV 143
>gi|195015670|ref|XP_001984248.1| GH15113 [Drosophila grimshawi]
gi|193897730|gb|EDV96596.1| GH15113 [Drosophila grimshawi]
Length = 194
Score = 144 bits (364), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 66/122 (54%), Positives = 86/122 (70%), Gaps = 6/122 (4%)
Query: 87 DVLEWHEYFMASAFLVAKRSKDPVTRVGAVIVNEDNKIVGTGYNGMPIGCSDDEFPWDKN 146
D L+W +YFMA+A L +KRSKDP T+VGA IV++ +IV GYNG P CSDD FPW K+
Sbjct: 29 DYLQWDDYFMATAILSSKRSKDPSTQVGACIVDKHKRIVAIGYNGFPRNCSDDVFPWSKD 88
Query: 147 THDE------LDMCHAEMNAILNKNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIYMC 200
+ + + + HAE NAILN N A +LYT+LFPCNEC K+IIQSGI+ ++Y+
Sbjct: 89 SDSDSIENKNMYVVHAEANAILNGNGASLDGTRLYTTLFPCNECTKLIIQSGIRNILYIS 148
Query: 201 DK 202
DK
Sbjct: 149 DK 150
Score = 81.3 bits (199), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 36/65 (55%), Positives = 46/65 (70%)
Query: 2 NAILNKNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIYMCDKHKQKPATIASKRMFDA 61
NAILN N A +LYT+LFPCNEC K+IIQSGI+ ++Y+ DK+ KP ASKRM +A
Sbjct: 107 NAILNGNGASLDGTRLYTTLFPCNECTKLIIQSGIRNILYISDKYSDKPTYRASKRMLNA 166
Query: 62 AKVHY 66
+ Y
Sbjct: 167 VGIIY 171
>gi|373107342|ref|ZP_09521641.1| hypothetical protein HMPREF9623_01305 [Stomatobaculum longum]
gi|371651172|gb|EHO16606.1| hypothetical protein HMPREF9623_01305 [Stomatobaculum longum]
Length = 164
Score = 144 bits (364), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 70/125 (56%), Positives = 85/125 (68%), Gaps = 9/125 (7%)
Query: 86 DDVLEWHEYFMASAFLVAKRSKDPVTRVGAVIVNEDNKIVGTGYNGMPIGCSDDEFPWDK 145
+D + W EYFM A+L A RSKDP T+VGA IV++DNKI+ GYNG P GCSDDEFPW K
Sbjct: 6 EDYISWDEYFMGVAYLSALRSKDPNTQVGACIVSDDNKILSMGYNGFPRGCSDDEFPWGK 65
Query: 146 NTHDELD--------MCHAEMNAILNKNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVI 197
H++ D H+E+NAILN + KLY +LFPCNECAK IIQSGI+ +I
Sbjct: 66 E-HEQDDPYQAKYFYATHSELNAILNYRGGSLEGSKLYVTLFPCNECAKAIIQSGIRTLI 124
Query: 198 YMCDK 202
Y DK
Sbjct: 125 YGEDK 129
Score = 78.6 bits (192), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 37/67 (55%), Positives = 45/67 (67%)
Query: 1 MNAILNKNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIYMCDKHKQKPATIASKRMFD 60
+NAILN + KLY +LFPCNECAK IIQSGI+ +IY DK+ A ASKRM +
Sbjct: 85 LNAILNYRGGSLEGSKLYVTLFPCNECAKAIIQSGIRTLIYGEDKYGDTAAVRASKRMLN 144
Query: 61 AAKVHYW 67
AA V Y+
Sbjct: 145 AAGVRYY 151
>gi|269798024|ref|YP_003311924.1| CMP/dCMP deaminase zinc-binding protein [Veillonella parvula DSM
2008]
gi|294791904|ref|ZP_06757052.1| deoxycytidylate deaminase (dCMP deaminase) [Veillonella sp. 6_1_27]
gi|416998846|ref|ZP_11939515.1| cytidine and deoxycytidylate deaminase zinc-binding region
[Veillonella parvula ACS-068-V-Sch12]
gi|269094653|gb|ACZ24644.1| CMP/dCMP deaminase zinc-binding protein [Veillonella parvula DSM
2008]
gi|294457134|gb|EFG25496.1| deoxycytidylate deaminase (dCMP deaminase) [Veillonella sp. 6_1_27]
gi|333976999|gb|EGL77858.1| cytidine and deoxycytidylate deaminase zinc-binding region
[Veillonella parvula ACS-068-V-Sch12]
Length = 159
Score = 144 bits (364), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 67/119 (56%), Positives = 84/119 (70%), Gaps = 3/119 (2%)
Query: 86 DDVLEWHEYFMASAFLVAKRSKDPVTRVGAVIVNEDNKIVGTGYNGMPIGCSDDEFPWDK 145
+D + W EYFM A L A+RSKDP T+VGA IV+ DNKI+ GYNGMP+ CSDD+F W++
Sbjct: 5 NDYISWDEYFMGVAILAAQRSKDPNTQVGACIVSNDNKILSIGYNGMPLNCSDDDFTWER 64
Query: 146 NTHDE---LDMCHAEMNAILNKNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIYMCD 201
+T D+ H+E+NAILN + K+Y +LFPCNECAK IIQSGIK VIY D
Sbjct: 65 DTADDNKYFYTVHSELNAILNYRGGSLEGSKIYVTLFPCNECAKAIIQSGIKAVIYRDD 123
Score = 70.5 bits (171), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 35/65 (53%), Positives = 40/65 (61%)
Query: 1 MNAILNKNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIYMCDKHKQKPATIASKRMFD 60
+NAILN + K+Y +LFPCNECAK IIQSGIK VIY D +K ASKRM
Sbjct: 80 LNAILNYRGGSLEGSKIYVTLFPCNECAKAIIQSGIKAVIYRDDLYKDTKEVKASKRMLK 139
Query: 61 AAKVH 65
A V
Sbjct: 140 TAGVE 144
>gi|401679863|ref|ZP_10811787.1| cytidine and deoxycytidylate deaminase zinc-binding region
[Veillonella sp. ACP1]
gi|400218990|gb|EJO49861.1| cytidine and deoxycytidylate deaminase zinc-binding region
[Veillonella sp. ACP1]
Length = 159
Score = 144 bits (363), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 67/118 (56%), Positives = 83/118 (70%), Gaps = 3/118 (2%)
Query: 87 DVLEWHEYFMASAFLVAKRSKDPVTRVGAVIVNEDNKIVGTGYNGMPIGCSDDEFPWDKN 146
D + W EYFM A L A+RSKDP T+VGA IV+ DNKI+ GYNGMP+ CSDD+F W+++
Sbjct: 6 DYISWDEYFMGVAILAAQRSKDPNTQVGACIVSNDNKILSIGYNGMPLNCSDDDFTWERD 65
Query: 147 THDE---LDMCHAEMNAILNKNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIYMCD 201
T D+ H+E+NAILN + K+Y +LFPCNECAK IIQSGIK VIY D
Sbjct: 66 TADDNKYFYTVHSELNAILNYRGGSLEGSKIYVTLFPCNECAKAIIQSGIKAVIYRDD 123
Score = 70.5 bits (171), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 35/64 (54%), Positives = 40/64 (62%)
Query: 1 MNAILNKNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIYMCDKHKQKPATIASKRMFD 60
+NAILN + K+Y +LFPCNECAK IIQSGIK VIY D +K ASKRM
Sbjct: 80 LNAILNYRGGSLEGSKIYVTLFPCNECAKAIIQSGIKAVIYRDDLYKDTKEVKASKRMLK 139
Query: 61 AAKV 64
A V
Sbjct: 140 TAGV 143
>gi|357054855|ref|ZP_09115934.1| hypothetical protein HMPREF9467_02906 [Clostridium clostridioforme
2_1_49FAA]
gi|355383792|gb|EHG30867.1| hypothetical protein HMPREF9467_02906 [Clostridium clostridioforme
2_1_49FAA]
Length = 164
Score = 144 bits (363), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 67/123 (54%), Positives = 80/123 (65%), Gaps = 7/123 (5%)
Query: 87 DVLEWHEYFMASAFLVAKRSKDPVTRVGAVIVNEDNKIVGTGYNGMPIGCSDDEFPWDKN 146
D + W EYFM A L KRSKDP T+VGA IV++DNKI+ GYNG P GCSDDEFPW K
Sbjct: 7 DYITWDEYFMGVALLSGKRSKDPSTQVGACIVSQDNKILSMGYNGFPKGCSDDEFPWGKE 66
Query: 147 THDE-------LDMCHAEMNAILNKNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIYM 199
E H+E+NAILN + KLY +LFPCNECAK IIQ+GI+ ++Y
Sbjct: 67 NEKEDPYNSKYFYSTHSELNAILNYRGGSLEGSKLYVTLFPCNECAKAIIQAGIRTIVYR 126
Query: 200 CDK 202
DK
Sbjct: 127 EDK 129
Score = 80.9 bits (198), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 36/67 (53%), Positives = 46/67 (68%)
Query: 1 MNAILNKNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIYMCDKHKQKPATIASKRMFD 60
+NAILN + KLY +LFPCNECAK IIQ+GI+ ++Y DK+ PA ASKRM +
Sbjct: 85 LNAILNYRGGSLEGSKLYVTLFPCNECAKAIIQAGIRTIVYREDKYADTPAVKASKRMLN 144
Query: 61 AAKVHYW 67
AA V Y+
Sbjct: 145 AAGVRYY 151
>gi|340755324|ref|ZP_08692014.1| deoxycytidylate deaminase [Fusobacterium sp. D12]
gi|373114783|ref|ZP_09528992.1| hypothetical protein HMPREF9466_03025 [Fusobacterium necrophorum
subsp. funduliforme 1_1_36S]
gi|419841108|ref|ZP_14364486.1| cytidine and deoxycytidylate deaminase zinc-binding region
[Fusobacterium necrophorum subsp. funduliforme ATCC
51357]
gi|421500305|ref|ZP_15947316.1| cytidine and deoxycytidylate deaminase zinc-binding region
[Fusobacterium necrophorum subsp. funduliforme Fnf 1007]
gi|313687151|gb|EFS23986.1| deoxycytidylate deaminase [Fusobacterium sp. D12]
gi|371650963|gb|EHO16399.1| hypothetical protein HMPREF9466_03025 [Fusobacterium necrophorum
subsp. funduliforme 1_1_36S]
gi|386906127|gb|EIJ70872.1| cytidine and deoxycytidylate deaminase zinc-binding region
[Fusobacterium necrophorum subsp. funduliforme ATCC
51357]
gi|402268719|gb|EJU18085.1| cytidine and deoxycytidylate deaminase zinc-binding region
[Fusobacterium necrophorum subsp. funduliforme Fnf 1007]
Length = 160
Score = 144 bits (363), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 67/121 (55%), Positives = 88/121 (72%), Gaps = 7/121 (5%)
Query: 87 DVLEWHEYFMASAFLVAKRSKDPVTRVGAVIVNEDNKIVGTGYNGMPIGCSDDEFPWDKN 146
D + W EYFM A L A RSKDP T+VGA IV+ D KI+G GYNG+P GC DDEFPW++
Sbjct: 5 DYITWDEYFMGVALLSAMRSKDPNTQVGACIVSPDKKIIGLGYNGLPKGCEDDEFPWERE 64
Query: 147 THDELD-----MCHAEMNAILNKNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIYMCD 201
+ L+ +CHAE+NAILN ++ K C +Y +LFPC+EC+K IIQSGI+E++Y+ D
Sbjct: 65 G-EFLETKYPYVCHAELNAILN-STQSLKNCSIYVALFPCHECSKAIIQSGIREIVYLSD 122
Query: 202 K 202
K
Sbjct: 123 K 123
Score = 79.7 bits (195), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 35/66 (53%), Positives = 50/66 (75%), Gaps = 1/66 (1%)
Query: 1 MNAILNKNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIYMCDKHKQKPATIASKRMFD 60
+NAILN ++ K C +Y +LFPC+EC+K IIQSGI+E++Y+ DK+ + + +ASKRM D
Sbjct: 80 LNAILN-STQSLKNCSIYVALFPCHECSKAIIQSGIREIVYLSDKYAETESNLASKRMLD 138
Query: 61 AAKVHY 66
AA V Y
Sbjct: 139 AAGVTY 144
>gi|304437889|ref|ZP_07397836.1| competence protein ComEB [Selenomonas sp. oral taxon 149 str.
67H29BP]
gi|304369111|gb|EFM22789.1| competence protein ComEB [Selenomonas sp. oral taxon 149 str.
67H29BP]
Length = 158
Score = 144 bits (363), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 70/119 (58%), Positives = 81/119 (68%), Gaps = 5/119 (4%)
Query: 88 VLEWHEYFMASAFLVAKRSKDPVTRVGAVIVNEDNKIVGTGYNGMPIGCSDDEFPWDKNT 147
++ W EYFM A A RSKDP T+VGA IVNED IVG GYNGMP GC D E+PW +
Sbjct: 2 IISWDEYFMGVALFSAYRSKDPHTQVGACIVNEDKHIVGVGYNGMPNGCDDHEYPWGRTG 61
Query: 148 HDELD----MCHAEMNAILNKNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIYMCDK 202
+ HAE+NAILN S K C++YTSLFPCNEC K IIQSGI+EVIY+ DK
Sbjct: 62 EFAEQKYPYVVHAELNAILNA-STSLKGCRIYTSLFPCNECCKAIIQSGIREVIYLSDK 119
Score = 79.0 bits (193), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 39/64 (60%), Positives = 47/64 (73%), Gaps = 1/64 (1%)
Query: 1 MNAILNKNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIYMCDKHKQKPATIASKRMFD 60
+NAILN S K C++YTSLFPCNEC K IIQSGI+EVIY+ DK+ +T ASKRM
Sbjct: 76 LNAILNA-STSLKGCRIYTSLFPCNECCKAIIQSGIREVIYLSDKYAAADSTKASKRMLA 134
Query: 61 AAKV 64
+A V
Sbjct: 135 SANV 138
>gi|313894545|ref|ZP_07828109.1| cytidine and deoxycytidylate deaminase zinc-binding region
[Veillonella sp. oral taxon 158 str. F0412]
gi|313440941|gb|EFR59369.1| cytidine and deoxycytidylate deaminase zinc-binding region
[Veillonella sp. oral taxon 158 str. F0412]
Length = 159
Score = 144 bits (363), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 67/118 (56%), Positives = 83/118 (70%), Gaps = 3/118 (2%)
Query: 87 DVLEWHEYFMASAFLVAKRSKDPVTRVGAVIVNEDNKIVGTGYNGMPIGCSDDEFPWDKN 146
D + W EYFM A L A+RSKDP T+VGA IV+ DNKI+ GYNGMP+ CSDD+F W+++
Sbjct: 6 DYISWDEYFMGVAILAAQRSKDPNTQVGACIVSNDNKILSIGYNGMPLNCSDDDFTWERD 65
Query: 147 THDE---LDMCHAEMNAILNKNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIYMCD 201
T D+ H+E+NAILN + K+Y +LFPCNECAK IIQSGIK VIY D
Sbjct: 66 TADDNKYFYTVHSELNAILNYRGGSLEGSKIYVTLFPCNECAKAIIQSGIKAVIYRDD 123
Score = 70.5 bits (171), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 35/65 (53%), Positives = 40/65 (61%)
Query: 1 MNAILNKNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIYMCDKHKQKPATIASKRMFD 60
+NAILN + K+Y +LFPCNECAK IIQSGIK VIY D +K ASKRM
Sbjct: 80 LNAILNYRGGSLEGSKIYVTLFPCNECAKAIIQSGIKAVIYRDDLYKDTKEVKASKRMLK 139
Query: 61 AAKVH 65
A V
Sbjct: 140 TAGVE 144
>gi|238926636|ref|ZP_04658396.1| dCMP deaminase [Selenomonas flueggei ATCC 43531]
gi|238885582|gb|EEQ49220.1| dCMP deaminase [Selenomonas flueggei ATCC 43531]
Length = 158
Score = 144 bits (363), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 70/119 (58%), Positives = 81/119 (68%), Gaps = 5/119 (4%)
Query: 88 VLEWHEYFMASAFLVAKRSKDPVTRVGAVIVNEDNKIVGTGYNGMPIGCSDDEFPWDKNT 147
++ W EYFM A A RSKDP T+VGA IVNED IVG GYNGMP GC D E+PW +
Sbjct: 2 IISWDEYFMGVALFSAYRSKDPHTQVGACIVNEDKHIVGVGYNGMPNGCDDHEYPWGRTG 61
Query: 148 HDELD----MCHAEMNAILNKNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIYMCDK 202
+ HAE+NAILN S K C++YTSLFPCNEC K IIQSGI+EVIY+ DK
Sbjct: 62 EFAEQKYPYVVHAELNAILNA-STSLKGCRIYTSLFPCNECCKAIIQSGIREVIYLSDK 119
Score = 79.0 bits (193), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 39/64 (60%), Positives = 47/64 (73%), Gaps = 1/64 (1%)
Query: 1 MNAILNKNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIYMCDKHKQKPATIASKRMFD 60
+NAILN S K C++YTSLFPCNEC K IIQSGI+EVIY+ DK+ +T ASKRM
Sbjct: 76 LNAILNA-STSLKGCRIYTSLFPCNECCKAIIQSGIREVIYLSDKYATADSTKASKRMLA 134
Query: 61 AAKV 64
+A V
Sbjct: 135 SANV 138
>gi|451343616|ref|ZP_21912687.1| hypothetical protein HMPREF9943_00912 [Eggerthia catenaformis OT
569 = DSM 20559]
gi|449337713|gb|EMD16870.1| hypothetical protein HMPREF9943_00912 [Eggerthia catenaformis OT
569 = DSM 20559]
Length = 158
Score = 144 bits (363), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 70/124 (56%), Positives = 91/124 (73%), Gaps = 8/124 (6%)
Query: 85 VDDVLEWHEYFMASAFLVAKRSKDPVTRVGAVIVNEDNKIVGTGYNGMPIGCSDDEFPWD 144
++ ++ W +YFM A L + RSKDP T+VGA IVN++NKIVG GYNGMP GC D++FPW
Sbjct: 1 MNRIISWDQYFMGVAKLSSYRSKDPNTQVGACIVNKENKIVGVGYNGMPWGCQDNQFPWQ 60
Query: 145 KNTHDELD------MCHAEMNAILNKNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIY 198
+ T EL+ + HAE+NAILN ++A C++Y SLFPCNECAK I+QSGIKE+IY
Sbjct: 61 QRT-GELNETKYAYVVHAELNAILN-STASLDNCRIYVSLFPCNECAKAIVQSGIKEIIY 118
Query: 199 MCDK 202
DK
Sbjct: 119 EDDK 122
Score = 79.0 bits (193), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 39/66 (59%), Positives = 48/66 (72%), Gaps = 1/66 (1%)
Query: 1 MNAILNKNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIYMCDKHKQKPATIASKRMFD 60
+NAILN ++A C++Y SLFPCNECAK I+QSGIKE+IY DK+K IASKR+
Sbjct: 79 LNAILN-STASLDNCRIYVSLFPCNECAKAIVQSGIKEIIYEDDKYKGTAMDIASKRILH 137
Query: 61 AAKVHY 66
AA V Y
Sbjct: 138 AAGVTY 143
>gi|291561900|emb|CBL40703.1| Deoxycytidylate deaminase [butyrate-producing bacterium SS3/4]
Length = 162
Score = 144 bits (363), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 68/119 (57%), Positives = 82/119 (68%), Gaps = 5/119 (4%)
Query: 89 LEWHEYFMASAFLVAKRSKDPVTRVGAVIVNEDNKIVGTGYNGMPIGCSDDEFPWDKNTH 148
+ W EYFM A L A RSKDP T+VGA IV+EDNKI+ GYNG P GCSDDEFPWDK
Sbjct: 9 ITWDEYFMGVAKLSAMRSKDPNTQVGACIVSEDNKILSMGYNGFPKGCSDDEFPWDKMDE 68
Query: 149 DELD-----MCHAEMNAILNKNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIYMCDK 202
D + + H+E+NAILN + KLY +LFPCNECAK IIQ+GI+ ++Y DK
Sbjct: 69 DPYNRKYFYVTHSELNAILNYRGGSLEGSKLYVTLFPCNECAKAIIQAGIQTIVYESDK 127
Score = 78.6 bits (192), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 35/67 (52%), Positives = 46/67 (68%)
Query: 1 MNAILNKNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIYMCDKHKQKPATIASKRMFD 60
+NAILN + KLY +LFPCNECAK IIQ+GI+ ++Y DK+ +T ASKRM +
Sbjct: 83 LNAILNYRGGSLEGSKLYVTLFPCNECAKAIIQAGIQTIVYESDKYANDASTRASKRMLN 142
Query: 61 AAKVHYW 67
AA V Y+
Sbjct: 143 AAGVRYY 149
>gi|412986177|emb|CCO17377.1| deoxycytidylate deaminase [Bathycoccus prasinos]
Length = 701
Score = 144 bits (362), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 67/123 (54%), Positives = 88/123 (71%), Gaps = 8/123 (6%)
Query: 89 LEWHEYFMASAFLVAKRSKDPVTRVGAVIVNEDNKIVGTGYNGMPIGCSDDEFPWDKN-- 146
L W +YFM AFL ++RSKDP +VGAVI +E I+G GYNG P GC DD PW K
Sbjct: 490 LSWDDYFMTVAFLSSQRSKDPNKQVGAVIASESKLILGVGYNGFPRGCGDDALPWAKKSP 549
Query: 147 THDELD-----MCHAEMNAILNKNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIYMCD 201
T D L+ +CHAEMNAI+NKNSAD K +Y +++PCNECAK++IQ+GI+EV+Y C+
Sbjct: 550 TGDPLETKYAYVCHAEMNAIMNKNSADVKNGTMYVTMYPCNECAKLMIQAGIREVVY-CE 608
Query: 202 KQM 204
++
Sbjct: 609 GKL 611
Score = 65.5 bits (158), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 26/41 (63%), Positives = 36/41 (87%)
Query: 1 MNAILNKNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIY 41
MNAI+NKNSAD K +Y +++PCNECAK++IQ+GI+EV+Y
Sbjct: 566 MNAIMNKNSADVKNGTMYVTMYPCNECAKLMIQAGIREVVY 606
>gi|346309445|ref|ZP_08851534.1| hypothetical protein HMPREF9457_03243 [Dorea formicigenerans
4_6_53AFAA]
gi|345899220|gb|EGX69070.1| hypothetical protein HMPREF9457_03243 [Dorea formicigenerans
4_6_53AFAA]
Length = 162
Score = 144 bits (362), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 70/121 (57%), Positives = 82/121 (67%), Gaps = 5/121 (4%)
Query: 87 DVLEWHEYFMASAFLVAKRSKDPVTRVGAVIVNEDNKIVGTGYNGMPIGCSDDEFPWDKN 146
D + W EYFM A L RSKDP T+VG IV++DNKI+ GYNG+P GCSDDEFPW +
Sbjct: 7 DYINWDEYFMGVAKLSGLRSKDPNTQVGCCIVSQDNKILSMGYNGLPKGCSDDEFPWVRE 66
Query: 147 THDELD-----MCHAEMNAILNKNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIYMCD 201
+ L H+E+NAILN + KLY SLFPCNECAK IIQSGIKEVIY C+
Sbjct: 67 GENPLKTKYVYTVHSELNAILNFRGGSLEGAKLYVSLFPCNECAKAIIQSGIKEVIYDCN 126
Query: 202 K 202
K
Sbjct: 127 K 127
Score = 84.7 bits (208), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 42/66 (63%), Positives = 46/66 (69%)
Query: 1 MNAILNKNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIYMCDKHKQKPATIASKRMFD 60
+NAILN + KLY SLFPCNECAK IIQSGIKEVIY C+K+ A AS RMFD
Sbjct: 83 LNAILNFRGGSLEGAKLYVSLFPCNECAKAIIQSGIKEVIYDCNKYDGSTAVQASMRMFD 142
Query: 61 AAKVHY 66
AA V Y
Sbjct: 143 AAGVAY 148
>gi|293401503|ref|ZP_06645646.1| probable deoxycytidylate deaminase [Erysipelotrichaceae bacterium
5_2_54FAA]
gi|373452299|ref|ZP_09544214.1| hypothetical protein HMPREF0984_01256 [Eubacterium sp. 3_1_31]
gi|291305141|gb|EFE46387.1| probable deoxycytidylate deaminase [Erysipelotrichaceae bacterium
5_2_54FAA]
gi|371966792|gb|EHO84274.1| hypothetical protein HMPREF0984_01256 [Eubacterium sp. 3_1_31]
Length = 161
Score = 144 bits (362), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 69/120 (57%), Positives = 83/120 (69%), Gaps = 5/120 (4%)
Query: 87 DVLEWHEYFMASAFLVAKRSKDPVTRVGAVIVNEDNKIVGTGYNGMPIGCSDDEFPWDKN 146
DVL W EYFM A L A RSKDP T+VGAVIV+ ++++V GYNG P GCSDDEFPWD+
Sbjct: 5 DVLSWDEYFMGLAHLSAMRSKDPSTQVGAVIVSGEHRVVSIGYNGFPNGCSDDEFPWDRE 64
Query: 147 THDELD----MCHAEMNAILNKNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIYMCDK 202
+ HAE+NAILN + D + C +Y SLFPCNECAK IIQSGI ++Y DK
Sbjct: 65 GDFGATKYPYVVHAELNAILNSKN-DLRGCSIYVSLFPCNECAKAIIQSGISRIVYESDK 123
Score = 79.3 bits (194), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 38/67 (56%), Positives = 46/67 (68%), Gaps = 1/67 (1%)
Query: 1 MNAILNKNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIYMCDKHKQKPATIASKRMFD 60
+NAILN + D + C +Y SLFPCNECAK IIQSGI ++Y DK+ ATIASKRM
Sbjct: 80 LNAILNSKN-DLRGCSIYVSLFPCNECAKAIIQSGISRIVYESDKYADTDATIASKRMLR 138
Query: 61 AAKVHYW 67
AA V +
Sbjct: 139 AAGVELY 145
>gi|303228977|ref|ZP_07315787.1| cytidine and deoxycytidylate deaminase zinc-binding region
[Veillonella atypica ACS-134-V-Col7a]
gi|302516391|gb|EFL58323.1| cytidine and deoxycytidylate deaminase zinc-binding region
[Veillonella atypica ACS-134-V-Col7a]
Length = 159
Score = 144 bits (362), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 66/118 (55%), Positives = 83/118 (70%), Gaps = 3/118 (2%)
Query: 87 DVLEWHEYFMASAFLVAKRSKDPVTRVGAVIVNEDNKIVGTGYNGMPIGCSDDEFPWDKN 146
D + W EYFM A L A+RSKDP T+VGA IV+ DNKI+ GYNGMP+ CSDD+F W+++
Sbjct: 6 DYISWDEYFMGVAILAAQRSKDPNTQVGACIVSNDNKILSIGYNGMPLNCSDDDFTWERD 65
Query: 147 THDE---LDMCHAEMNAILNKNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIYMCD 201
T D+ H+E+NAILN + K+Y +LFPCNECAK IIQSGIK V+Y D
Sbjct: 66 TADDNKYFYTVHSELNAILNYRGGSLEGSKIYVTLFPCNECAKAIIQSGIKAVLYRDD 123
Score = 69.7 bits (169), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 34/64 (53%), Positives = 40/64 (62%)
Query: 1 MNAILNKNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIYMCDKHKQKPATIASKRMFD 60
+NAILN + K+Y +LFPCNECAK IIQSGIK V+Y D +K ASKRM
Sbjct: 80 LNAILNYRGGSLEGSKIYVTLFPCNECAKAIIQSGIKAVLYRDDLYKDTKEVKASKRMLK 139
Query: 61 AAKV 64
A V
Sbjct: 140 TAGV 143
>gi|315918255|ref|ZP_07914495.1| deoxycytidylate deaminase [Fusobacterium gonidiaformans ATCC 25563]
gi|317059814|ref|ZP_07924299.1| deoxycytidylate deaminase [Fusobacterium sp. 3_1_5R]
gi|313685490|gb|EFS22325.1| deoxycytidylate deaminase [Fusobacterium sp. 3_1_5R]
gi|313692130|gb|EFS28965.1| deoxycytidylate deaminase [Fusobacterium gonidiaformans ATCC 25563]
Length = 160
Score = 144 bits (362), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 67/121 (55%), Positives = 88/121 (72%), Gaps = 7/121 (5%)
Query: 87 DVLEWHEYFMASAFLVAKRSKDPVTRVGAVIVNEDNKIVGTGYNGMPIGCSDDEFPWDKN 146
D + W EYFM A L A RSKDP T+VGA IV+ D KI+G GYNG+P GC DDEFPW++
Sbjct: 5 DYITWDEYFMGVALLSAMRSKDPNTQVGACIVSPDKKIIGLGYNGLPKGCEDDEFPWERE 64
Query: 147 THDELD-----MCHAEMNAILNKNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIYMCD 201
+ L+ +CHAE+NAILN ++ K C +Y +LFPC+EC+K IIQSGI+E++Y+ D
Sbjct: 65 G-EFLETKYPYVCHAELNAILN-STQSLKNCTIYVALFPCHECSKAIIQSGIREIVYLSD 122
Query: 202 K 202
K
Sbjct: 123 K 123
Score = 78.6 bits (192), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 35/66 (53%), Positives = 50/66 (75%), Gaps = 1/66 (1%)
Query: 1 MNAILNKNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIYMCDKHKQKPATIASKRMFD 60
+NAILN ++ K C +Y +LFPC+EC+K IIQSGI+E++Y+ DK+ + + IASKRM D
Sbjct: 80 LNAILN-STQSLKNCTIYVALFPCHECSKAIIQSGIREIVYLSDKYAETESNIASKRMLD 138
Query: 61 AAKVHY 66
+A V Y
Sbjct: 139 SAGVVY 144
>gi|255084043|ref|XP_002508596.1| ytidine and deoxycytidylated deaminase zinc-binding protein
[Micromonas sp. RCC299]
gi|226523873|gb|ACO69854.1| ytidine and deoxycytidylated deaminase zinc-binding protein
[Micromonas sp. RCC299]
Length = 443
Score = 144 bits (362), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 68/127 (53%), Positives = 85/127 (66%), Gaps = 7/127 (5%)
Query: 83 KRVDDVLEWHEYFMASAFLVAKRSKDPVTRVGAVIVNEDNKIVGTGYNGMPIGCSDDEFP 142
K D L+W +YFM+ AFL A+RSKDP +VGAVIV D I+G GYNG P GCSD + P
Sbjct: 147 KPRDRYLKWDDYFMSVAFLSAQRSKDPNKQVGAVIVGPDRVIMGVGYNGFPRGCSDSDLP 206
Query: 143 WDKNTHDELDM-------CHAEMNAILNKNSADTKRCKLYTSLFPCNECAKVIIQSGIKE 195
W K + + M CHAEMNAI+NKNS +Y +++PCNECAK+IIQSGI+E
Sbjct: 207 WAKKSTNGNPMETKYAYVCHAEMNAIMNKNSQSLHGATVYVTMYPCNECAKLIIQSGIRE 266
Query: 196 VIYMCDK 202
V+Y K
Sbjct: 267 VVYFEGK 273
Score = 63.2 bits (152), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 26/45 (57%), Positives = 34/45 (75%)
Query: 1 MNAILNKNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIYMCDK 45
MNAI+NKNS +Y +++PCNECAK+IIQSGI+EV+Y K
Sbjct: 229 MNAIMNKNSQSLHGATVYVTMYPCNECAKLIIQSGIREVVYFEGK 273
>gi|195378584|ref|XP_002048063.1| GJ13755 [Drosophila virilis]
gi|194155221|gb|EDW70405.1| GJ13755 [Drosophila virilis]
Length = 193
Score = 144 bits (362), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 67/121 (55%), Positives = 84/121 (69%), Gaps = 5/121 (4%)
Query: 87 DVLEWHEYFMASAFLVAKRSKDPVTRVGAVIVNEDNKIVGTGYNGMPIGCSDDEFPWDKN 146
D L W +YFMA+A L ++RSKDP T+VGA IV++ +IV GYNG P CSDD F W K+
Sbjct: 29 DYLHWDDYFMATALLSSRRSKDPSTQVGACIVDKHKRIVAIGYNGFPRDCSDDVFSWSKD 88
Query: 147 THDELD-----MCHAEMNAILNKNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIYMCD 201
D L+ + HAE NAILN NS +LYT+LFPCNEC K+IIQSGI+E+ Y+ D
Sbjct: 89 NSDPLENKNMYVVHAEANAILNSNSRSLDGTRLYTTLFPCNECTKLIIQSGIREIYYISD 148
Query: 202 K 202
K
Sbjct: 149 K 149
Score = 83.2 bits (204), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 38/65 (58%), Positives = 47/65 (72%)
Query: 2 NAILNKNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIYMCDKHKQKPATIASKRMFDA 61
NAILN NS +LYT+LFPCNEC K+IIQSGI+E+ Y+ DK+ +KP ASKRM DA
Sbjct: 106 NAILNSNSRSLDGTRLYTTLFPCNECTKLIIQSGIREIYYISDKYAEKPIYRASKRMLDA 165
Query: 62 AKVHY 66
+ Y
Sbjct: 166 VGIVY 170
>gi|355682121|ref|ZP_09062322.1| hypothetical protein HMPREF9469_05359 [Clostridium citroniae
WAL-17108]
gi|354811230|gb|EHE95864.1| hypothetical protein HMPREF9469_05359 [Clostridium citroniae
WAL-17108]
Length = 164
Score = 143 bits (361), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 66/123 (53%), Positives = 80/123 (65%), Gaps = 7/123 (5%)
Query: 87 DVLEWHEYFMASAFLVAKRSKDPVTRVGAVIVNEDNKIVGTGYNGMPIGCSDDEFPWDKN 146
D + W EYFM A L +RSKDP T+VGA IV++DNKI+ GYNG P GCSDDEFPW K
Sbjct: 7 DYITWDEYFMGVALLSGRRSKDPSTQVGACIVSQDNKILSMGYNGFPKGCSDDEFPWGKE 66
Query: 147 THDE-------LDMCHAEMNAILNKNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIYM 199
E H+E+NAILN + KLY +LFPCNECAK IIQ+GIK +++
Sbjct: 67 AEQEDPYNSKYFYSTHSELNAILNYRGGSLEGSKLYVTLFPCNECAKAIIQAGIKTIVFR 126
Query: 200 CDK 202
DK
Sbjct: 127 EDK 129
Score = 80.5 bits (197), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 36/67 (53%), Positives = 46/67 (68%)
Query: 1 MNAILNKNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIYMCDKHKQKPATIASKRMFD 60
+NAILN + KLY +LFPCNECAK IIQ+GIK +++ DK+ PA ASKRM +
Sbjct: 85 LNAILNYRGGSLEGSKLYVTLFPCNECAKAIIQAGIKTIVFREDKYADTPAVRASKRMLN 144
Query: 61 AAKVHYW 67
AA V Y+
Sbjct: 145 AAGVRYY 151
>gi|402836269|ref|ZP_10884811.1| cytidine and deoxycytidylate deaminase zinc-binding region
[Mogibacterium sp. CM50]
gi|402271748|gb|EJU20987.1| cytidine and deoxycytidylate deaminase zinc-binding region
[Mogibacterium sp. CM50]
Length = 163
Score = 143 bits (360), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 65/118 (55%), Positives = 81/118 (68%), Gaps = 2/118 (1%)
Query: 87 DVLEWHEYFMASAFLVAKRSKDPVTRVGAVIVNEDNKIVGTGYNGMPIGCSDDEFPWDKN 146
D + W EYFM + L AKRSKDP T+VGA IV+ ++ I+ TGYNG P+GCSDDE PW +
Sbjct: 5 DYISWDEYFMGVSLLAAKRSKDPNTQVGACIVDSNHVILSTGYNGFPLGCSDDELPWART 64
Query: 147 THDE--LDMCHAEMNAILNKNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIYMCDK 202
D + HAE+NAILN + +Y LFPCNECAK IIQSGI+EV+Y+ DK
Sbjct: 65 GEDTKYPYVVHAELNAILNSGGKSLRDATIYVGLFPCNECAKAIIQSGIREVVYLDDK 122
Score = 75.9 bits (185), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 33/64 (51%), Positives = 44/64 (68%)
Query: 1 MNAILNKNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIYMCDKHKQKPATIASKRMFD 60
+NAILN + +Y LFPCNECAK IIQSGI+EV+Y+ DK+ + +T+ASKR+
Sbjct: 78 LNAILNSGGKSLRDATIYVGLFPCNECAKAIIQSGIREVVYLDDKYANEKSTLASKRLLS 137
Query: 61 AAKV 64
A V
Sbjct: 138 MAGV 141
>gi|224011555|ref|XP_002295552.1| dCMP deaminase [Thalassiosira pseudonana CCMP1335]
gi|209583583|gb|ACI64269.1| dCMP deaminase [Thalassiosira pseudonana CCMP1335]
Length = 176
Score = 143 bits (360), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 67/124 (54%), Positives = 89/124 (71%), Gaps = 5/124 (4%)
Query: 83 KRVDDVLEWHEYFMASAFLVAKRSKDPVTRVGAVIVNEDNKIVGTGYNGMPIGCSDDEFP 142
K+ +D L W +YFMA +FL A+RSKDP T+VGA IV+ + I+G GYNG P GCSD+ P
Sbjct: 15 KKREDYLSWDDYFMAVSFLSAQRSKDPNTQVGACIVDTNKSIIGIGYNGFPRGCSDEHLP 74
Query: 143 WDKNTHDELD-----MCHAEMNAILNKNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVI 197
W ++ +L + HAE+NAILNK SA + +Y +LFPCNEC+KVIIQSGI+EV+
Sbjct: 75 WARHASCDLHKKYPYVVHAEVNAILNKCSASVRGATIYVALFPCNECSKVIIQSGIREVV 134
Query: 198 YMCD 201
Y+ D
Sbjct: 135 YLND 138
Score = 71.6 bits (174), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 35/64 (54%), Positives = 45/64 (70%)
Query: 1 MNAILNKNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIYMCDKHKQKPATIASKRMFD 60
+NAILNK SA + +Y +LFPCNEC+KVIIQSGI+EV+Y+ D + A AS+ MF
Sbjct: 95 VNAILNKCSASVRGATIYVALFPCNECSKVIIQSGIREVVYLNDFYHDTDACRASRIMFK 154
Query: 61 AAKV 64
A V
Sbjct: 155 MAGV 158
>gi|283796628|ref|ZP_06345781.1| putative deoxycytidylate deaminase [Clostridium sp. M62/1]
gi|291076051|gb|EFE13415.1| cytidine and deoxycytidylate deaminase zinc-binding region
[Clostridium sp. M62/1]
gi|295092489|emb|CBK78596.1| Deoxycytidylate deaminase [Clostridium cf. saccharolyticum K10]
gi|295115332|emb|CBL36179.1| Deoxycytidylate deaminase [butyrate-producing bacterium SM4/1]
Length = 176
Score = 143 bits (360), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 71/133 (53%), Positives = 85/133 (63%), Gaps = 9/133 (6%)
Query: 79 GSPHK--RVDDVLEWHEYFMASAFLVAKRSKDPVTRVGAVIVNEDNKIVGTGYNGMPIGC 136
G HK + D + W EYFM A L A RSKDP T+VGA IV+ DNKI+ GYNG PIGC
Sbjct: 9 GDFHKSEKRQDYITWDEYFMGVAKLAAMRSKDPSTQVGACIVSSDNKILSMGYNGFPIGC 68
Query: 137 SDDEFPWDKNTHDE-------LDMCHAEMNAILNKNSADTKRCKLYTSLFPCNECAKVII 189
SDDEFPW K + L H+E+NAILN + KLY +LFPCNECAK II
Sbjct: 69 SDDEFPWGKEHETDDPYNAKYLYTTHSELNAILNYRGGSLEGSKLYVTLFPCNECAKAII 128
Query: 190 QSGIKEVIYMCDK 202
Q+GI+ ++Y DK
Sbjct: 129 QAGIRTLVYDSDK 141
Score = 81.6 bits (200), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 36/67 (53%), Positives = 47/67 (70%)
Query: 1 MNAILNKNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIYMCDKHKQKPATIASKRMFD 60
+NAILN + KLY +LFPCNECAK IIQ+GI+ ++Y DK++ P+ ASKRM D
Sbjct: 97 LNAILNYRGGSLEGSKLYVTLFPCNECAKAIIQAGIRTLVYDSDKYQDTPSVRASKRMLD 156
Query: 61 AAKVHYW 67
AA V Y+
Sbjct: 157 AAGVRYY 163
>gi|160944642|ref|ZP_02091869.1| hypothetical protein FAEPRAM212_02155 [Faecalibacterium prausnitzii
M21/2]
gi|158443826|gb|EDP20830.1| cytidine and deoxycytidylate deaminase zinc-binding region
[Faecalibacterium prausnitzii M21/2]
gi|295104361|emb|CBL01905.1| Deoxycytidylate deaminase [Faecalibacterium prausnitzii SL3/3]
Length = 159
Score = 143 bits (360), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 66/121 (54%), Positives = 84/121 (69%), Gaps = 4/121 (3%)
Query: 86 DDVLEWHEYFMASAFLVAKRSKDPVTRVGAVIVNEDNKIVGTGYNGMPIGCSDDEFPWDK 145
+D + W EYFM A L A RSKDP ++VGA IV+ +NKI+ GYNGMP+GCSDDE PW++
Sbjct: 4 EDYINWDEYFMGIALLTAMRSKDPNSQVGACIVSPENKILSLGYNGMPMGCSDDEMPWER 63
Query: 146 N----THDELDMCHAEMNAILNKNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIYMCD 201
+ +CHAE+NAILN + K ++Y +LFPCNEC K IIQSGI EV+Y D
Sbjct: 64 EGAPLQTKYMYVCHAELNAILNSAHNNLKGARVYVTLFPCNECTKAIIQSGIAEVVYYGD 123
Query: 202 K 202
K
Sbjct: 124 K 124
Score = 70.9 bits (172), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 32/64 (50%), Positives = 44/64 (68%)
Query: 1 MNAILNKNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIYMCDKHKQKPATIASKRMFD 60
+NAILN + K ++Y +LFPCNEC K IIQSGI EV+Y DK+ ++IA++ MF+
Sbjct: 80 LNAILNSAHNNLKGARVYVTLFPCNECTKAIIQSGIAEVVYYGDKYHDSDSSIAARFMFE 139
Query: 61 AAKV 64
A V
Sbjct: 140 HAGV 143
>gi|195591779|ref|XP_002085616.1| GD14864 [Drosophila simulans]
gi|194197625|gb|EDX11201.1| GD14864 [Drosophila simulans]
Length = 187
Score = 143 bits (360), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 72/131 (54%), Positives = 87/131 (66%), Gaps = 11/131 (8%)
Query: 82 HKRVDDVLEWHEYFMASAFLVAKRSKDPVTRVGAVIVNEDNKIVGTGYNGMPIGCSDDEF 141
HKR D L W +YFMA++ L AKRSKDPVT+VGA IV+ N+IV GYNG P CSDD F
Sbjct: 20 HKR-KDYLHWDDYFMATSLLSAKRSKDPVTQVGACIVDSQNRIVAIGYNGFPRNCSDDVF 78
Query: 142 PWDK----NTHDEL------DMCHAEMNAILNKNSADTKRCKLYTSLFPCNECAKVIIQS 191
PW K + D+L + HAE NAILN +LYT+LFPCNECAK+IIQ
Sbjct: 79 PWSKAPKRSKKDDLLEDKKMYVVHAEANAILNTKGMSLSGTRLYTTLFPCNECAKLIIQV 138
Query: 192 GIKEVIYMCDK 202
GI +V+Y+ DK
Sbjct: 139 GISQVLYLSDK 149
Score = 82.4 bits (202), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 37/65 (56%), Positives = 45/65 (69%)
Query: 2 NAILNKNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIYMCDKHKQKPATIASKRMFDA 61
NAILN +LYT+LFPCNECAK+IIQ GI +V+Y+ DK+ KP +ASKRM DA
Sbjct: 106 NAILNTKGMSLSGTRLYTTLFPCNECAKLIIQVGISQVLYLSDKYAHKPKYLASKRMLDA 165
Query: 62 AKVHY 66
V Y
Sbjct: 166 VGVEY 170
>gi|167748501|ref|ZP_02420628.1| hypothetical protein ANACAC_03245 [Anaerostipes caccae DSM 14662]
gi|167652493|gb|EDR96622.1| cytidine and deoxycytidylate deaminase zinc-binding region
[Anaerostipes caccae DSM 14662]
Length = 170
Score = 143 bits (360), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 68/121 (56%), Positives = 84/121 (69%), Gaps = 6/121 (4%)
Query: 87 DVLEWHEYFMASAFLVAKRSKDPVTRVGAVIVNEDNKIVGTGYNGMPIGCSDDEFPWDKN 146
D L W +YFM A L A+RSKD T+VGA +VN+ NKI+ GYNGMP GC DD+ PW++
Sbjct: 16 DYLSWDQYFMGVALLSAQRSKDDHTQVGACLVNDQNKILSVGYNGMPTGCHDDDMPWERE 75
Query: 147 THDELD-----MCHAEMNAILNKNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIYMCD 201
+ LD +CHAE+NAILN ++Y +LFPCNECAK IIQSG+KEVIYM D
Sbjct: 76 G-EPLDTKYFYVCHAELNAILNYGGGSLYGARVYVTLFPCNECAKAIIQSGMKEVIYMQD 134
Query: 202 K 202
K
Sbjct: 135 K 135
Score = 84.0 bits (206), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 39/66 (59%), Positives = 46/66 (69%)
Query: 1 MNAILNKNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIYMCDKHKQKPATIASKRMFD 60
+NAILN ++Y +LFPCNECAK IIQSG+KEVIYM DK+ T+ASKRMFD
Sbjct: 91 LNAILNYGGGSLYGARVYVTLFPCNECAKAIIQSGMKEVIYMQDKYADDDMTVASKRMFD 150
Query: 61 AAKVHY 66
A V Y
Sbjct: 151 MAGVKY 156
>gi|238019264|ref|ZP_04599690.1| hypothetical protein VEIDISOL_01128 [Veillonella dispar ATCC 17748]
gi|237863963|gb|EEP65253.1| hypothetical protein VEIDISOL_01128 [Veillonella dispar ATCC 17748]
Length = 159
Score = 143 bits (360), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 66/118 (55%), Positives = 83/118 (70%), Gaps = 3/118 (2%)
Query: 87 DVLEWHEYFMASAFLVAKRSKDPVTRVGAVIVNEDNKIVGTGYNGMPIGCSDDEFPWDKN 146
D + W EYFM A L A+RSKDP T+VGA IV+ DNKI+ GYNGMP+ CSDD+F W+++
Sbjct: 6 DYISWDEYFMGVAILAAQRSKDPNTQVGACIVSNDNKILSIGYNGMPLNCSDDDFTWERD 65
Query: 147 THDE---LDMCHAEMNAILNKNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIYMCD 201
+ D+ H+E+NAILN + K+Y +LFPCNECAK IIQSGIK VIY D
Sbjct: 66 SADDNKYFYTVHSELNAILNYRGGSLEGSKIYVTLFPCNECAKAIIQSGIKAVIYRDD 123
Score = 70.5 bits (171), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 35/65 (53%), Positives = 40/65 (61%)
Query: 1 MNAILNKNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIYMCDKHKQKPATIASKRMFD 60
+NAILN + K+Y +LFPCNECAK IIQSGIK VIY D +K ASKRM
Sbjct: 80 LNAILNYRGGSLEGSKIYVTLFPCNECAKAIIQSGIKAVIYRDDLYKDTKEVKASKRMLK 139
Query: 61 AAKVH 65
A V
Sbjct: 140 TAGVE 144
>gi|317471969|ref|ZP_07931301.1| cytidine and deoxycytidylate deaminase zinc-binding protein
[Anaerostipes sp. 3_2_56FAA]
gi|316900373|gb|EFV22355.1| cytidine and deoxycytidylate deaminase zinc-binding protein
[Anaerostipes sp. 3_2_56FAA]
Length = 170
Score = 143 bits (360), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 68/121 (56%), Positives = 84/121 (69%), Gaps = 6/121 (4%)
Query: 87 DVLEWHEYFMASAFLVAKRSKDPVTRVGAVIVNEDNKIVGTGYNGMPIGCSDDEFPWDKN 146
D L W +YFM A L A+RSKD T+VGA +VN+ NKI+ GYNGMP GC DD+ PW++
Sbjct: 16 DYLSWDQYFMGVALLSAQRSKDDHTQVGACLVNDQNKILSVGYNGMPTGCHDDDMPWERE 75
Query: 147 THDELD-----MCHAEMNAILNKNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIYMCD 201
+ LD +CHAE+NAILN ++Y +LFPCNECAK IIQSG+KEVIYM D
Sbjct: 76 G-EPLDTKYFYVCHAELNAILNYGGGSLYGARVYVTLFPCNECAKAIIQSGMKEVIYMQD 134
Query: 202 K 202
K
Sbjct: 135 K 135
Score = 82.0 bits (201), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 38/66 (57%), Positives = 46/66 (69%)
Query: 1 MNAILNKNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIYMCDKHKQKPATIASKRMFD 60
+NAILN ++Y +LFPCNECAK IIQSG+KEVIYM DK+ T+ASK+MFD
Sbjct: 91 LNAILNYGGGSLYGARVYVTLFPCNECAKAIIQSGMKEVIYMQDKYADDDMTVASKKMFD 150
Query: 61 AAKVHY 66
A V Y
Sbjct: 151 MAGVKY 156
>gi|219110369|ref|XP_002176936.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
gi|217411471|gb|EEC51399.1| predicted protein, partial [Phaeodactylum tricornutum CCAP 1055/1]
Length = 172
Score = 143 bits (360), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 66/120 (55%), Positives = 83/120 (69%), Gaps = 5/120 (4%)
Query: 87 DVLEWHEYFMASAFLVAKRSKDPVTRVGAVIVNEDNKIVGTGYNGMPIGCSDDEFPWDKN 146
D + W +YFMA AFL A+RSKDP T+VGA IV+ +IV GYNG P G SDD PW +
Sbjct: 4 DYISWDDYFMAMAFLTAQRSKDPNTQVGACIVDRHQRIVALGYNGFPAGASDDVLPWSRT 63
Query: 147 THDELD-----MCHAEMNAILNKNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIYMCD 201
L +CHAE+NA+LNK S + K LY +LFPCNECAKV++Q+G+KEV+YM D
Sbjct: 64 AVQPLHRKYHYVCHAEVNAVLNKCSDNVKDTTLYVALFPCNECAKVLVQAGVKEVVYMSD 123
Score = 69.3 bits (168), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 32/64 (50%), Positives = 45/64 (70%)
Query: 1 MNAILNKNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIYMCDKHKQKPATIASKRMFD 60
+NA+LNK S + K LY +LFPCNECAKV++Q+G+KEV+YM D + + AS+ +F
Sbjct: 80 VNAVLNKCSDNVKDTTLYVALFPCNECAKVLVQAGVKEVVYMSDIYHDTDSCRASRILFH 139
Query: 61 AAKV 64
A V
Sbjct: 140 MAGV 143
>gi|379011909|ref|YP_005269721.1| deoxycytidylate (dCMP) deaminase DctD [Acetobacterium woodii DSM
1030]
gi|375302698|gb|AFA48832.1| deoxycytidylate (dCMP) deaminase DctD [Acetobacterium woodii DSM
1030]
Length = 165
Score = 142 bits (359), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 69/120 (57%), Positives = 83/120 (69%), Gaps = 4/120 (3%)
Query: 87 DVLEWHEYFMASAFLVAKRSKDPVTRVGAVIVNEDNKIVGTGYNGMPIGCSDDEFPWDKN 146
D L W EYFM A L A+RSKDP T+VGA IVN +N I+ TGYNGMP GCSDD+ PW++
Sbjct: 9 DYLTWEEYFMGIALLSAQRSKDPNTQVGACIVNGNNIILSTGYNGMPKGCSDDQLPWERE 68
Query: 147 THDE----LDMCHAEMNAILNKNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIYMCDK 202
E +CHAE+NAILN + LY + FPCNECAK IIQ+GIK+VIY+ DK
Sbjct: 69 GGFEDTKYAYVCHAELNAILNSDGRSLADSILYVTCFPCNECAKAIIQAGIKKVIYLEDK 128
Score = 65.9 bits (159), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 31/64 (48%), Positives = 42/64 (65%)
Query: 1 MNAILNKNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIYMCDKHKQKPATIASKRMFD 60
+NAILN + LY + FPCNECAK IIQ+GIK+VIY+ DK+ AT SK++
Sbjct: 84 LNAILNSDGRSLADSILYVTCFPCNECAKAIIQAGIKKVIYLEDKYPDSEATKVSKKLLA 143
Query: 61 AAKV 64
A++
Sbjct: 144 MAQI 147
>gi|167765731|ref|ZP_02437784.1| hypothetical protein CLOSS21_00220 [Clostridium sp. SS2/1]
gi|317497038|ref|ZP_07955366.1| cytidine and deoxycytidylate deaminase zinc-binding region
[Lachnospiraceae bacterium 5_1_63FAA]
gi|429762757|ref|ZP_19295136.1| cytidine and deoxycytidylate deaminase zinc-binding region
[Anaerostipes hadrus DSM 3319]
gi|167712583|gb|EDS23162.1| cytidine and deoxycytidylate deaminase zinc-binding region
[Clostridium sp. SS2/1]
gi|291558932|emb|CBL37732.1| Deoxycytidylate deaminase [butyrate-producing bacterium SSC/2]
gi|316895698|gb|EFV17852.1| cytidine and deoxycytidylate deaminase zinc-binding region
[Lachnospiraceae bacterium 5_1_63FAA]
gi|429180997|gb|EKY22194.1| cytidine and deoxycytidylate deaminase zinc-binding region
[Anaerostipes hadrus DSM 3319]
Length = 159
Score = 142 bits (359), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 68/121 (56%), Positives = 85/121 (70%), Gaps = 6/121 (4%)
Query: 87 DVLEWHEYFMASAFLVAKRSKDPVTRVGAVIVNEDNKIVGTGYNGMPIGCSDDEFPWDKN 146
D + W +YFM A L A+RSKD T+VGA +VN+ NKI+ GYNGMPIGC+DD+ PW++
Sbjct: 5 DYISWDQYFMGIAILSAQRSKDDHTQVGACLVNDHNKILSVGYNGMPIGCNDDDMPWERE 64
Query: 147 THDELD-----MCHAEMNAILNKNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIYMCD 201
D L +CHAE+NAILN ++Y +LFPCNECAK IIQSG+KEVIYM D
Sbjct: 65 G-DPLHTKYFYVCHAELNAILNYGGGSLDGARVYVTLFPCNECAKAIIQSGMKEVIYMQD 123
Query: 202 K 202
K
Sbjct: 124 K 124
Score = 80.5 bits (197), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 38/66 (57%), Positives = 45/66 (68%)
Query: 1 MNAILNKNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIYMCDKHKQKPATIASKRMFD 60
+NAILN ++Y +LFPCNECAK IIQSG+KEVIYM DK+ T ASK+MFD
Sbjct: 80 LNAILNYGGGSLDGARVYVTLFPCNECAKAIIQSGMKEVIYMQDKYAGSDTTKASKKMFD 139
Query: 61 AAKVHY 66
A V Y
Sbjct: 140 MAGVKY 145
>gi|229829440|ref|ZP_04455509.1| hypothetical protein GCWU000342_01530 [Shuttleworthia satelles DSM
14600]
gi|229791871|gb|EEP27985.1| hypothetical protein GCWU000342_01530 [Shuttleworthia satelles DSM
14600]
Length = 191
Score = 142 bits (359), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 65/121 (53%), Positives = 82/121 (67%), Gaps = 4/121 (3%)
Query: 86 DDVLEWHEYFMASAFLVAKRSKDPVTRVGAVIVNEDNKIVGTGYNGMPIGCSDDEFPWDK 145
+D + W EYFM A L RSKDP T+VGA IV+ NKI+ GYNG+PIGCSDDEFPW++
Sbjct: 36 EDYISWDEYFMGVAALAGMRSKDPNTQVGACIVSSQNKILSIGYNGLPIGCSDDEFPWNR 95
Query: 146 NT----HDELDMCHAEMNAILNKNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIYMCD 201
+ H+E+NAILN + K+Y +LFPCNECAK IIQ+GIKE+I+ D
Sbjct: 96 EGNPLENKYFYTTHSELNAILNYRGGSLEGTKMYVTLFPCNECAKAIIQAGIKEIIFKTD 155
Query: 202 K 202
K
Sbjct: 156 K 156
Score = 80.1 bits (196), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 35/64 (54%), Positives = 45/64 (70%)
Query: 1 MNAILNKNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIYMCDKHKQKPATIASKRMFD 60
+NAILN + K+Y +LFPCNECAK IIQ+GIKE+I+ DK+ P+ IASKRM
Sbjct: 112 LNAILNYRGGSLEGTKMYVTLFPCNECAKAIIQAGIKEIIFKTDKYADTPSVIASKRMLK 171
Query: 61 AAKV 64
AA +
Sbjct: 172 AAGI 175
>gi|291520267|emb|CBK75488.1| Deoxycytidylate deaminase [Butyrivibrio fibrisolvens 16/4]
Length = 161
Score = 142 bits (358), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 70/121 (57%), Positives = 81/121 (66%), Gaps = 6/121 (4%)
Query: 87 DVLEWHEYFMASAFLVAKRSKDPVTRVGAVIVNEDNKIVGTGYNGMPIGCSDDEFPWDKN 146
D + W EYFM A L RSKDP T+VGA IV++DNKI+ GYNG P GCSDDEFPW +
Sbjct: 7 DYISWDEYFMGVAVLSGMRSKDPNTQVGACIVSQDNKILSMGYNGFPNGCSDDEFPWAR- 65
Query: 147 THDELD-----MCHAEMNAILNKNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIYMCD 201
D L+ H+E+NAILN + KLY SLFPCNECAK IIQSGIK +IY D
Sbjct: 66 VGDPLENKYFYTTHSELNAILNYRGGSLEGSKLYVSLFPCNECAKAIIQSGIKTIIYDSD 125
Query: 202 K 202
K
Sbjct: 126 K 126
Score = 84.0 bits (206), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 39/66 (59%), Positives = 46/66 (69%)
Query: 1 MNAILNKNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIYMCDKHKQKPATIASKRMFD 60
+NAILN + KLY SLFPCNECAK IIQSGIK +IY DK++ P+ IASKRM
Sbjct: 82 LNAILNYRGGSLEGSKLYVSLFPCNECAKAIIQSGIKTIIYDSDKYENTPSVIASKRMLR 141
Query: 61 AAKVHY 66
AA V +
Sbjct: 142 AAGVEF 147
>gi|91088935|ref|XP_973512.1| PREDICTED: similar to Deoxycytidylate deaminase (dCMP deaminase)
[Tribolium castaneum]
gi|270011567|gb|EFA08015.1| hypothetical protein TcasGA2_TC005604 [Tribolium castaneum]
Length = 178
Score = 142 bits (358), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 65/125 (52%), Positives = 87/125 (69%), Gaps = 6/125 (4%)
Query: 88 VLEWHEYFMASAFLVAKRSKDPVTRVGAVIVNEDNKIVGTGYNGMPIGCSDDEFPWDKNT 147
+L+ HE+FM+ L A+RSKDP T+VGA +V+ ++G+GYNGMP GC DDEFPW K +
Sbjct: 13 LLDAHEHFMSFCLLAAQRSKDPCTQVGACVVDRQGNLIGSGYNGMPRGCHDDEFPWGKRS 72
Query: 148 HDELD-----MCHAEMNAILNKNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIYMCDK 202
D L+ +CHAE+NAI N + C +Y +LFPCNECAK+IIQ+GI EV+Y+ DK
Sbjct: 73 EDPLENKHLYVCHAELNAIAN-TTGTMNDCVIYVTLFPCNECAKLIIQNGISEVVYLSDK 131
Query: 203 QMSYK 207
K
Sbjct: 132 HAHKK 136
Score = 83.6 bits (205), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 37/67 (55%), Positives = 49/67 (73%), Gaps = 1/67 (1%)
Query: 1 MNAILNKNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIYMCDKHKQKPATIASKRMFD 60
+NAI N + C +Y +LFPCNECAK+IIQ+GI EV+Y+ DKH K +T+A+K MFD
Sbjct: 88 LNAIAN-TTGTMNDCVIYVTLFPCNECAKLIIQNGISEVVYLSDKHAHKKSTVAAKAMFD 146
Query: 61 AAKVHYW 67
+A V YW
Sbjct: 147 SAGVKYW 153
>gi|261367306|ref|ZP_05980189.1| putative deoxycytidylate deaminase [Subdoligranulum variabile DSM
15176]
gi|282570909|gb|EFB76444.1| cytidine and deoxycytidylate deaminase zinc-binding region
[Subdoligranulum variabile DSM 15176]
Length = 159
Score = 142 bits (358), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 66/120 (55%), Positives = 85/120 (70%), Gaps = 4/120 (3%)
Query: 87 DVLEWHEYFMASAFLVAKRSKDPVTRVGAVIVNEDNKIVGTGYNGMPIGCSDDEFPWDKN 146
D + W EYFM A L A RSKD ++VGA IV+ +NKI+ GYNGMPIGC+DD+ PW++
Sbjct: 5 DYISWDEYFMGIALLSAMRSKDNNSQVGACIVSPENKILSLGYNGMPIGCNDDDMPWERE 64
Query: 147 THD----ELDMCHAEMNAILNKNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIYMCDK 202
D + +CH+E+NAILN D ++Y +LFPCNECAK IIQSGIKE+IY+ DK
Sbjct: 65 GDDLNTKYMYVCHSELNAILNSPHNDLTGARMYVTLFPCNECAKAIIQSGIKELIYLSDK 124
Score = 81.6 bits (200), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 37/66 (56%), Positives = 47/66 (71%)
Query: 1 MNAILNKNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIYMCDKHKQKPATIASKRMFD 60
+NAILN D ++Y +LFPCNECAK IIQSGIKE+IY+ DK+ A+IAS+RMF+
Sbjct: 80 LNAILNSPHNDLTGARMYVTLFPCNECAKAIIQSGIKELIYLSDKYHDTHASIASRRMFN 139
Query: 61 AAKVHY 66
V Y
Sbjct: 140 MTGVKY 145
>gi|323342858|ref|ZP_08083090.1| competence protein comEB [Erysipelothrix rhusiopathiae ATCC 19414]
gi|336066341|ref|YP_004561199.1| dCMP deaminase [Erysipelothrix rhusiopathiae str. Fujisawa]
gi|322463970|gb|EFY09164.1| competence protein comEB [Erysipelothrix rhusiopathiae ATCC 19414]
gi|334296287|dbj|BAK32158.1| dCMP deaminase [Erysipelothrix rhusiopathiae str. Fujisawa]
Length = 159
Score = 142 bits (358), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 68/121 (56%), Positives = 84/121 (69%), Gaps = 5/121 (4%)
Query: 86 DDVLEWHEYFMASAFLVAKRSKDPVTRVGAVIVNEDNKIVGTGYNGMPIGCSDDEFPWDK 145
D+V+ W EYFM A L A RSKDP T+VGA IV++ KIVG GYNG+P G SDD FPW++
Sbjct: 5 DNVISWDEYFMGLAHLSALRSKDPSTQVGAAIVDQQKKIVGIGYNGLPTGLSDDAFPWER 64
Query: 146 ----NTHDELDMCHAEMNAILNKNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIYMCD 201
T + HAE+NAILN + + C +Y SLFPCNEC+K IIQSGIKE++Y D
Sbjct: 65 EGDFQTTKYAYVVHAELNAILNATQS-LQGCTIYVSLFPCNECSKAIIQSGIKEIVYEDD 123
Query: 202 K 202
K
Sbjct: 124 K 124
Score = 79.7 bits (195), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 37/66 (56%), Positives = 47/66 (71%), Gaps = 1/66 (1%)
Query: 1 MNAILNKNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIYMCDKHKQKPATIASKRMFD 60
+NAILN + + C +Y SLFPCNEC+K IIQSGIKE++Y DK+ + A + SKRM D
Sbjct: 81 LNAILNATQS-LQGCTIYVSLFPCNECSKAIIQSGIKEIVYEDDKYAETDAVLVSKRMLD 139
Query: 61 AAKVHY 66
AA V Y
Sbjct: 140 AAGVSY 145
>gi|195627622|gb|ACG35641.1| deoxycytidylate deaminase [Zea mays]
Length = 228
Score = 142 bits (358), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 69/131 (52%), Positives = 91/131 (69%), Gaps = 8/131 (6%)
Query: 81 PHKRVDDVLEWHEYFMASAFLVAKRSKDPVTRVGAVIVNEDNKIVGTGYNGMPIGCSDDE 140
P KR + + W +YFMA AFL A+RSKDP +VGA +V+++ I+G GYNG P GCSDD+
Sbjct: 61 PVKR-EGYISWDDYFMAIAFLSAERSKDPNRQVGACLVSQEGIILGIGYNGFPRGCSDDK 119
Query: 141 FPWDKNTH--DELD-----MCHAEMNAILNKNSADTKRCKLYTSLFPCNECAKVIIQSGI 193
PW K + D L+ + HAE+NAILN N A KLY ++FPCNECAK+IIQSG+
Sbjct: 120 LPWAKKSASGDPLETKFPYVVHAEVNAILNTNHASAAGQKLYVTMFPCNECAKIIIQSGV 179
Query: 194 KEVIYMCDKQM 204
EVIY +K++
Sbjct: 180 SEVIYFVEKKI 190
Score = 65.9 bits (159), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 34/75 (45%), Positives = 44/75 (58%), Gaps = 2/75 (2%)
Query: 1 MNAILNKNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIYMCDKHKQKPA--TIASKRM 58
+NAILN N A KLY ++FPCNECAK+IIQSG+ EVIY +K A +AS ++
Sbjct: 144 VNAILNTNHASAAGQKLYVTMFPCNECAKIIIQSGVSEVIYFVEKKIDNSAHVYVASHKL 203
Query: 59 FDAAKVHYWSEMDKM 73
A V +M
Sbjct: 204 LSMAGVKVRKHQPQM 218
>gi|440790067|gb|ELR11355.1| DCMP deaminase [Acanthamoeba castellanii str. Neff]
Length = 191
Score = 142 bits (357), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 68/120 (56%), Positives = 83/120 (69%), Gaps = 7/120 (5%)
Query: 89 LEWHEYFMASAFLVAKRSKDPVTRVGAVIVNEDNKIVGTGYNGMPIGCSDDEFPWDKNT- 147
+EW +YFM A L A+RSKDP T+VGA IVN+D +IV TGYNG P GC DD FPW + +
Sbjct: 7 VEWDDYFMFVALLSAQRSKDPHTQVGACIVNQDKRIVSTGYNGFPRGCDDDIFPWKRESA 66
Query: 148 -HDELD-----MCHAEMNAILNKNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIYMCD 201
D LD + HAE+NA+LNKN+ K C +Y LFPC ECAK IIQSGI V+Y+ D
Sbjct: 67 CEDILDSKSLYVVHAELNAVLNKNAKSVKGCTIYAPLFPCCECAKAIIQSGISRVVYLTD 126
Score = 75.1 bits (183), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 36/65 (55%), Positives = 44/65 (67%), Gaps = 1/65 (1%)
Query: 1 MNAILNKNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIYMCDKHKQK-PATIASKRMF 59
+NA+LNKN+ K C +Y LFPC ECAK IIQSGI V+Y+ D K P +AS+RM
Sbjct: 83 LNAVLNKNAKSVKGCTIYAPLFPCCECAKAIIQSGISRVVYLTDGGKAPLPRYVASRRML 142
Query: 60 DAAKV 64
AAKV
Sbjct: 143 SAAKV 147
>gi|115440135|ref|NP_001044347.1| Os01g0765000 [Oryza sativa Japonica Group]
gi|57899567|dbj|BAD87146.1| deoxycytidylate deaminase-like [Oryza sativa Japonica Group]
gi|113533878|dbj|BAF06261.1| Os01g0765000 [Oryza sativa Japonica Group]
gi|215678846|dbj|BAG95283.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 248
Score = 142 bits (357), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 69/131 (52%), Positives = 91/131 (69%), Gaps = 8/131 (6%)
Query: 81 PHKRVDDVLEWHEYFMASAFLVAKRSKDPVTRVGAVIVNEDNKIVGTGYNGMPIGCSDDE 140
P KR + + W +YFMA AFL AKRSKDP +VGA +V+++ I+G GYNG P GCSD++
Sbjct: 67 PAKR-EGYISWDDYFMAIAFLSAKRSKDPNRQVGACLVSQEGIILGIGYNGFPRGCSDNK 125
Query: 141 FPWDKNT--HDELD-----MCHAEMNAILNKNSADTKRCKLYTSLFPCNECAKVIIQSGI 193
PW K + D L+ + HAE+NAILN N A KLY ++FPCNECAK+IIQSG+
Sbjct: 126 LPWAKKSAKGDPLETKYPYVVHAEVNAILNTNHASAAGQKLYVTMFPCNECAKIIIQSGV 185
Query: 194 KEVIYMCDKQM 204
EVIY +K++
Sbjct: 186 SEVIYFVEKRI 196
Score = 65.5 bits (158), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 36/90 (40%), Positives = 49/90 (54%), Gaps = 9/90 (10%)
Query: 1 MNAILNKNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIYMCDKH--KQKPATIASKRM 58
+NAILN N A KLY ++FPCNECAK+IIQSG+ EVIY +K +AS ++
Sbjct: 150 VNAILNTNHASAAGQKLYVTMFPCNECAKIIIQSGVSEVIYFVEKRIDNSDYVYVASHKL 209
Query: 59 FDAAKVHYWSEMDKMNGV-------QNGSP 81
A V +M+ + +NG P
Sbjct: 210 LSMAGVKVRKHQPQMSQIPIKFQEPRNGEP 239
>gi|323485387|ref|ZP_08090735.1| hypothetical protein HMPREF9474_02486 [Clostridium symbiosum
WAL-14163]
gi|323694149|ref|ZP_08108328.1| dCMP deaminase [Clostridium symbiosum WAL-14673]
gi|355625587|ref|ZP_09048322.1| hypothetical protein HMPREF1020_02401 [Clostridium sp. 7_3_54FAA]
gi|323401250|gb|EGA93600.1| hypothetical protein HMPREF9474_02486 [Clostridium symbiosum
WAL-14163]
gi|323501866|gb|EGB17749.1| dCMP deaminase [Clostridium symbiosum WAL-14673]
gi|354821280|gb|EHF05671.1| hypothetical protein HMPREF1020_02401 [Clostridium sp. 7_3_54FAA]
Length = 177
Score = 142 bits (357), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 69/127 (54%), Positives = 82/127 (64%), Gaps = 7/127 (5%)
Query: 83 KRVDDVLEWHEYFMASAFLVAKRSKDPVTRVGAVIVNEDNKIVGTGYNGMPIGCSDDEFP 142
++ +D + W EYFM A L A RSKDP T+VGA IV+ DNKI+ GYNG P GCSDDEFP
Sbjct: 16 EKRNDYITWDEYFMGVAKLSAMRSKDPSTQVGACIVSGDNKILSMGYNGFPKGCSDDEFP 75
Query: 143 WDKNTHDE-------LDMCHAEMNAILNKNSADTKRCKLYTSLFPCNECAKVIIQSGIKE 195
W K E H+E+NAILN + KLY +LFPCNECAK IIQ+GIK
Sbjct: 76 WGKELETEDPYNAKYFYTTHSELNAILNYRGGSLEGSKLYVTLFPCNECAKAIIQAGIKT 135
Query: 196 VIYMCDK 202
+IY DK
Sbjct: 136 LIYDSDK 142
Score = 81.6 bits (200), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 37/67 (55%), Positives = 46/67 (68%)
Query: 1 MNAILNKNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIYMCDKHKQKPATIASKRMFD 60
+NAILN + KLY +LFPCNECAK IIQ+GIK +IY DK+ P+ ASKRM D
Sbjct: 98 LNAILNYRGGSLEGSKLYVTLFPCNECAKAIIQAGIKTLIYDSDKYGATPSVRASKRMLD 157
Query: 61 AAKVHYW 67
+A V Y+
Sbjct: 158 SAGVRYY 164
>gi|225419861|ref|ZP_03762164.1| hypothetical protein CLOSTASPAR_06202 [Clostridium asparagiforme
DSM 15981]
gi|225041485|gb|EEG51731.1| hypothetical protein CLOSTASPAR_06202 [Clostridium asparagiforme
DSM 15981]
Length = 195
Score = 142 bits (357), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 68/123 (55%), Positives = 82/123 (66%), Gaps = 7/123 (5%)
Query: 87 DVLEWHEYFMASAFLVAKRSKDPVTRVGAVIVNEDNKIVGTGYNGMPIGCSDDEFPWDK- 145
D + W EYFM A L KRSKDP T+VGA IV+ DNKI+ GYNG P GCSDDEFPW++
Sbjct: 38 DYITWDEYFMGVAILAGKRSKDPSTQVGACIVSPDNKILSMGYNGFPKGCSDDEFPWERE 97
Query: 146 NTHDE------LDMCHAEMNAILNKNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIYM 199
N D+ H+E+NAILN + KLY +LFPCNECAK IIQ+GIK ++Y
Sbjct: 98 NEADDPYNAKYFYSTHSELNAILNYRGGSLEGSKLYVTLFPCNECAKAIIQAGIKTIVYG 157
Query: 200 CDK 202
DK
Sbjct: 158 QDK 160
Score = 82.0 bits (201), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 37/67 (55%), Positives = 46/67 (68%)
Query: 1 MNAILNKNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIYMCDKHKQKPATIASKRMFD 60
+NAILN + KLY +LFPCNECAK IIQ+GIK ++Y DK+ PA ASKRM +
Sbjct: 116 LNAILNYRGGSLEGSKLYVTLFPCNECAKAIIQAGIKTIVYGQDKYADTPAVQASKRMLN 175
Query: 61 AAKVHYW 67
AA V Y+
Sbjct: 176 AAGVRYY 182
>gi|226503799|ref|NP_001152254.1| deoxycytidylate deaminase [Zea mays]
gi|195654307|gb|ACG46621.1| deoxycytidylate deaminase [Zea mays]
gi|223948705|gb|ACN28436.1| unknown [Zea mays]
gi|413952318|gb|AFW84967.1| deoxycytidylate deaminase [Zea mays]
Length = 228
Score = 142 bits (357), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 69/131 (52%), Positives = 91/131 (69%), Gaps = 8/131 (6%)
Query: 81 PHKRVDDVLEWHEYFMASAFLVAKRSKDPVTRVGAVIVNEDNKIVGTGYNGMPIGCSDDE 140
P KR + + W +YFMA AFL A+RSKDP +VGA +V+++ I+G GYNG P GCSDD+
Sbjct: 61 PVKR-EGYISWDDYFMAIAFLSAERSKDPNRQVGACLVSQEGIILGIGYNGFPRGCSDDK 119
Query: 141 FPWDKN--THDELD-----MCHAEMNAILNKNSADTKRCKLYTSLFPCNECAKVIIQSGI 193
PW K + D L+ + HAE+NAILN N A KLY ++FPCNECAK+IIQSG+
Sbjct: 120 LPWAKKSASGDPLETKFPYVVHAEVNAILNTNHASAAGQKLYVTMFPCNECAKIIIQSGV 179
Query: 194 KEVIYMCDKQM 204
EVIY +K++
Sbjct: 180 SEVIYFVEKKI 190
Score = 65.9 bits (159), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 34/75 (45%), Positives = 44/75 (58%), Gaps = 2/75 (2%)
Query: 1 MNAILNKNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIYMCDKHKQKPA--TIASKRM 58
+NAILN N A KLY ++FPCNECAK+IIQSG+ EVIY +K A +AS ++
Sbjct: 144 VNAILNTNHASAAGQKLYVTMFPCNECAKIIIQSGVSEVIYFVEKKIDNSAHVYVASHKL 203
Query: 59 FDAAKVHYWSEMDKM 73
A V +M
Sbjct: 204 LSMAGVKVRKHQPQM 218
>gi|357131029|ref|XP_003567146.1| PREDICTED: probable deoxycytidylate deaminase-like [Brachypodium
distachyon]
Length = 240
Score = 142 bits (357), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 71/151 (47%), Positives = 96/151 (63%), Gaps = 14/151 (9%)
Query: 68 SEMDKMNGVQNGSPH-------KRVDDVLEWHEYFMASAFLVAKRSKDPVTRVGAVIVNE 120
+E +NG G P + + + W +YFMA AFL A+RSKDP +VGA +V++
Sbjct: 48 AEPLAVNGSATGRPPVQDPFKATKREGFISWDDYFMAIAFLSAERSKDPNRQVGACLVSQ 107
Query: 121 DNKIVGTGYNGMPIGCSDDEFPWDKNT--HDELD-----MCHAEMNAILNKNSADTKRCK 173
+ I+G GYNG P GCSDD+ PW K + D L+ + HAE+NAILN N A K
Sbjct: 108 EGIILGIGYNGFPRGCSDDKLPWAKKSARGDPLETKYPYVVHAEVNAILNTNHASAAGQK 167
Query: 174 LYTSLFPCNECAKVIIQSGIKEVIYMCDKQM 204
LY ++FPCNECAK+IIQSG+ EVIY +K++
Sbjct: 168 LYVTMFPCNECAKIIIQSGVSEVIYFVEKRI 198
Score = 65.1 bits (157), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 28/46 (60%), Positives = 34/46 (73%)
Query: 1 MNAILNKNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIYMCDKH 46
+NAILN N A KLY ++FPCNECAK+IIQSG+ EVIY +K
Sbjct: 152 VNAILNTNHASAAGQKLYVTMFPCNECAKIIIQSGVSEVIYFVEKR 197
>gi|225017541|ref|ZP_03706733.1| hypothetical protein CLOSTMETH_01468 [Clostridium methylpentosum
DSM 5476]
gi|224949691|gb|EEG30900.1| hypothetical protein CLOSTMETH_01468 [Clostridium methylpentosum
DSM 5476]
Length = 145
Score = 142 bits (357), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 72/112 (64%), Positives = 82/112 (73%), Gaps = 7/112 (6%)
Query: 96 MASAFLVAKRSKDPVTRVGAVIVNEDNKIVGTGYNGMPIGCSDDEFPWDKNTHDELD--- 152
M A L A+RSKDP T+VGA IV +DNKI+ GYNGMPIGCSDDE PW N + LD
Sbjct: 1 MGIALLSAQRSKDPNTQVGACIVGQDNKILSLGYNGMPIGCSDDELPW-SNQGEALDTKY 59
Query: 153 --MCHAEMNAILNKNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIYMCDK 202
+CHAE+NAILN + D KLYT+LFPCNECAK IIQSGIKEV+Y DK
Sbjct: 60 LFVCHAELNAILN-SGKDLSGAKLYTTLFPCNECAKAIIQSGIKEVVYCSDK 110
Score = 81.3 bits (199), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 41/66 (62%), Positives = 48/66 (72%), Gaps = 1/66 (1%)
Query: 1 MNAILNKNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIYMCDKHKQKPATIASKRMFD 60
+NAILN + D KLYT+LFPCNECAK IIQSGIKEV+Y DK+ +TIASK+MF
Sbjct: 67 LNAILN-SGKDLSGAKLYTTLFPCNECAKAIIQSGIKEVVYCSDKYADTESTIASKKMFG 125
Query: 61 AAKVHY 66
A V Y
Sbjct: 126 MAGVCY 131
>gi|313894732|ref|ZP_07828293.1| cytidine and deoxycytidylate deaminase zinc-binding region
[Selenomonas sp. oral taxon 137 str. F0430]
gi|320531057|ref|ZP_08032086.1| cytidine and deoxycytidylate deaminase zinc-binding region
[Selenomonas artemidis F0399]
gi|402303981|ref|ZP_10823060.1| cytidine and deoxycytidylate deaminase zinc-binding region
[Selenomonas sp. FOBRC9]
gi|312976641|gb|EFR42095.1| cytidine and deoxycytidylate deaminase zinc-binding region
[Selenomonas sp. oral taxon 137 str. F0430]
gi|320136639|gb|EFW28592.1| cytidine and deoxycytidylate deaminase zinc-binding region
[Selenomonas artemidis F0399]
gi|400375907|gb|EJP28800.1| cytidine and deoxycytidylate deaminase zinc-binding region
[Selenomonas sp. FOBRC9]
Length = 159
Score = 142 bits (357), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 70/120 (58%), Positives = 83/120 (69%), Gaps = 7/120 (5%)
Query: 88 VLEWHEYFMASAFLVAKRSKDPVTRVGAVIVNEDNKIVGTGYNGMPIGCSDDEFPWDKNT 147
++ W EYFM A A RSKDP T+VGA IVNED IVG GYNGMP GC D E+PW + T
Sbjct: 2 IITWDEYFMGIAIFSAYRSKDPHTQVGACIVNEDKHIVGVGYNGMPNGCDDSEYPWGR-T 60
Query: 148 HDELD-----MCHAEMNAILNKNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIYMCDK 202
+ D + HAE+NAILN S K C++Y SLFPCNEC K IIQSGI+EV+Y+ DK
Sbjct: 61 GEFADQKYPYVVHAELNAILNA-STSLKGCRIYVSLFPCNECCKAIIQSGIREVVYLSDK 119
Score = 76.6 bits (187), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 37/64 (57%), Positives = 46/64 (71%), Gaps = 1/64 (1%)
Query: 1 MNAILNKNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIYMCDKHKQKPATIASKRMFD 60
+NAILN S K C++Y SLFPCNEC K IIQSGI+EV+Y+ DK+ +T ASKRM
Sbjct: 76 LNAILNA-STSLKGCRIYVSLFPCNECCKAIIQSGIREVVYLSDKYAATDSTKASKRMLA 134
Query: 61 AAKV 64
+A V
Sbjct: 135 SAGV 138
>gi|427406690|ref|ZP_18896895.1| hypothetical protein HMPREF9161_01255 [Selenomonas sp. F0473]
gi|425708120|gb|EKU71161.1| hypothetical protein HMPREF9161_01255 [Selenomonas sp. F0473]
Length = 158
Score = 142 bits (357), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 70/120 (58%), Positives = 83/120 (69%), Gaps = 7/120 (5%)
Query: 88 VLEWHEYFMASAFLVAKRSKDPVTRVGAVIVNEDNKIVGTGYNGMPIGCSDDEFPWDKNT 147
++ W EYFM A A RSKDP T+VGA IVNED IVG GYNGMP GC D E+PW + T
Sbjct: 2 IITWDEYFMGIAIFSAYRSKDPHTQVGACIVNEDKHIVGVGYNGMPNGCDDSEYPWGR-T 60
Query: 148 HDELD-----MCHAEMNAILNKNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIYMCDK 202
+ D + HAE+NAILN S K C++Y SLFPCNEC K IIQSGI+EV+Y+ DK
Sbjct: 61 GEFADQKYPYVVHAELNAILNA-STSLKGCRIYVSLFPCNECCKAIIQSGIREVVYLSDK 119
Score = 76.6 bits (187), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 37/64 (57%), Positives = 46/64 (71%), Gaps = 1/64 (1%)
Query: 1 MNAILNKNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIYMCDKHKQKPATIASKRMFD 60
+NAILN S K C++Y SLFPCNEC K IIQSGI+EV+Y+ DK+ +T ASKRM
Sbjct: 76 LNAILNA-STSLKGCRIYVSLFPCNECCKAIIQSGIREVVYLSDKYAATDSTKASKRMLA 134
Query: 61 AAKV 64
+A V
Sbjct: 135 SAGV 138
>gi|163816077|ref|ZP_02207447.1| hypothetical protein COPEUT_02257 [Coprococcus eutactus ATCC 27759]
gi|158448887|gb|EDP25882.1| cytidine and deoxycytidylate deaminase zinc-binding region
[Coprococcus eutactus ATCC 27759]
Length = 159
Score = 142 bits (357), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 67/124 (54%), Positives = 86/124 (69%), Gaps = 6/124 (4%)
Query: 87 DVLEWHEYFMASAFLVAKRSKDPVTRVGAVIVNEDNKIVGTGYNGMPIGCSDDEFPWDKN 146
D + W +YFM A + A+RSKDP T+VGA IV+++N+I+ GYNGMP GC DD PW K
Sbjct: 5 DYISWDQYFMGIAMMSAERSKDPSTQVGACIVDKNNRILSMGYNGMPAGCDDDAMPWGK- 63
Query: 147 THDELD-----MCHAEMNAILNKNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIYMCD 201
+ LD +CHAE+N+ILN + K +Y++LFPCNECAK IIQ GIKEV+YM D
Sbjct: 64 VGNPLDNKYFYVCHAELNSILNYRGGNLKDAIIYSTLFPCNECAKAIIQCGIKEVVYMSD 123
Query: 202 KQMS 205
K S
Sbjct: 124 KYAS 127
Score = 84.3 bits (207), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 39/66 (59%), Positives = 48/66 (72%)
Query: 1 MNAILNKNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIYMCDKHKQKPATIASKRMFD 60
+N+ILN + K +Y++LFPCNECAK IIQ GIKEV+YM DK+ +TIASKRMFD
Sbjct: 80 LNSILNYRGGNLKDAIIYSTLFPCNECAKAIIQCGIKEVVYMSDKYASTDSTIASKRMFD 139
Query: 61 AAKVHY 66
A V Y
Sbjct: 140 MAGVKY 145
>gi|401564663|ref|ZP_10805539.1| cytidine and deoxycytidylate deaminase zinc-binding region
[Selenomonas sp. FOBRC6]
gi|400188610|gb|EJO22763.1| cytidine and deoxycytidylate deaminase zinc-binding region
[Selenomonas sp. FOBRC6]
Length = 158
Score = 141 bits (356), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 69/119 (57%), Positives = 80/119 (67%), Gaps = 5/119 (4%)
Query: 88 VLEWHEYFMASAFLVAKRSKDPVTRVGAVIVNEDNKIVGTGYNGMPIGCSDDEFPWDKNT 147
++ W EYFM A A RSKDP T+VGA IVNED IVG GYNGMP GC D E+PW +
Sbjct: 2 IISWDEYFMGVAIFSAYRSKDPHTQVGACIVNEDKHIVGVGYNGMPNGCDDREYPWGRTG 61
Query: 148 HDELD----MCHAEMNAILNKNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIYMCDK 202
+ HAE+NAILN S K C++Y SLFPCNEC K IIQSGI+EVIY+ DK
Sbjct: 62 EFAEQKYPYVVHAELNAILNA-STSLKGCRIYVSLFPCNECCKAIIQSGIREVIYLSDK 119
Score = 77.0 bits (188), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 38/64 (59%), Positives = 46/64 (71%), Gaps = 1/64 (1%)
Query: 1 MNAILNKNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIYMCDKHKQKPATIASKRMFD 60
+NAILN S K C++Y SLFPCNEC K IIQSGI+EVIY+ DK+ + AT SKRM
Sbjct: 76 LNAILNA-STSLKGCRIYVSLFPCNECCKAIIQSGIREVIYLSDKYAETDATKISKRMLA 134
Query: 61 AAKV 64
+A V
Sbjct: 135 SAGV 138
>gi|357058314|ref|ZP_09119168.1| hypothetical protein HMPREF9334_00885 [Selenomonas infelix ATCC
43532]
gi|355374167|gb|EHG21468.1| hypothetical protein HMPREF9334_00885 [Selenomonas infelix ATCC
43532]
Length = 165
Score = 141 bits (355), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 68/119 (57%), Positives = 80/119 (67%), Gaps = 5/119 (4%)
Query: 88 VLEWHEYFMASAFLVAKRSKDPVTRVGAVIVNEDNKIVGTGYNGMPIGCSDDEFPWDKNT 147
++ W EYFM A A RSKDP T+VGA IVNED IVG GYNGMP GC D E+PW +
Sbjct: 2 IISWDEYFMGVAIFSAYRSKDPHTQVGACIVNEDKHIVGVGYNGMPNGCDDREYPWGRTG 61
Query: 148 HDELD----MCHAEMNAILNKNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIYMCDK 202
+ HAE+NAILN S K C++Y SLFPCNEC K IIQSGI+EV+Y+ DK
Sbjct: 62 EFAEQKYPYVVHAELNAILNA-STSLKGCRIYVSLFPCNECCKAIIQSGIREVVYLSDK 119
Score = 83.2 bits (204), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 41/71 (57%), Positives = 50/71 (70%), Gaps = 2/71 (2%)
Query: 1 MNAILNKNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIYMCDKHKQKPATIASKRMFD 60
+NAILN S K C++Y SLFPCNEC K IIQSGI+EV+Y+ DK+ AT SKRMFD
Sbjct: 76 LNAILNA-STSLKGCRIYVSLFPCNECCKAIIQSGIREVVYLSDKYAASEATKISKRMFD 134
Query: 61 AAKVHYWSEMD 71
+A V W M+
Sbjct: 135 SAGVR-WRRME 144
>gi|295099508|emb|CBK88597.1| Deoxycytidylate deaminase [Eubacterium cylindroides T2-87]
Length = 164
Score = 141 bits (355), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 72/121 (59%), Positives = 85/121 (70%), Gaps = 7/121 (5%)
Query: 87 DVLEWHEYFMASAFLVAKRSKDPVTRVGAVIVNEDNKIVGTGYNGMPIGCSDDEFPWDKN 146
DVL W EYFM+ A L AKRSKDP T+VGA IVN ++VG GYNG P GC D+EFPW ++
Sbjct: 5 DVLSWDEYFMSMAHLSAKRSKDPSTQVGACIVNSQKRVVGLGYNGFPKGCDDNEFPWARD 64
Query: 147 THDELD-----MCHAEMNAILNKNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIYMCD 201
+ LD + HAE+NAILN + D C +Y SLFPCNECAK IIQSGIK V+Y D
Sbjct: 65 -GEFLDTKYPYVVHAELNAILN-SIQDLNGCTIYVSLFPCNECAKAIIQSGIKCVVYESD 122
Query: 202 K 202
K
Sbjct: 123 K 123
Score = 72.8 bits (177), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 38/65 (58%), Positives = 44/65 (67%), Gaps = 1/65 (1%)
Query: 1 MNAILNKNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIYMCDKHKQKPATIASKRMFD 60
+NAILN + D C +Y SLFPCNECAK IIQSGIK V+Y DK+ A IASK+MF
Sbjct: 80 LNAILN-SIQDLNGCTIYVSLFPCNECAKAIIQSGIKCVVYESDKYAGTEANIASKKMFR 138
Query: 61 AAKVH 65
A V
Sbjct: 139 DAGVE 143
>gi|292669313|ref|ZP_06602739.1| deoxycytidylate deaminase [Selenomonas noxia ATCC 43541]
gi|422344218|ref|ZP_16425144.1| hypothetical protein HMPREF9432_01204 [Selenomonas noxia F0398]
gi|292649154|gb|EFF67126.1| deoxycytidylate deaminase [Selenomonas noxia ATCC 43541]
gi|355377537|gb|EHG24754.1| hypothetical protein HMPREF9432_01204 [Selenomonas noxia F0398]
Length = 158
Score = 141 bits (355), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 70/120 (58%), Positives = 82/120 (68%), Gaps = 7/120 (5%)
Query: 88 VLEWHEYFMASAFLVAKRSKDPVTRVGAVIVNEDNKIVGTGYNGMPIGCSDDEFPWDKNT 147
++ W EYFM A A RSKDP T+VGA IVNED IVG GYNGMP GC D +PW + T
Sbjct: 2 IISWDEYFMGVAIFSAYRSKDPHTQVGACIVNEDKHIVGVGYNGMPNGCDDSVYPWGR-T 60
Query: 148 HDELD-----MCHAEMNAILNKNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIYMCDK 202
D D + HAE+NAILN S K C++Y SLFPCNEC K IIQSGI+EV+Y+ DK
Sbjct: 61 GDFADQKYPYVVHAELNAILNA-STSLKGCRIYVSLFPCNECCKAIIQSGIREVVYLSDK 119
Score = 76.6 bits (187), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 37/64 (57%), Positives = 46/64 (71%), Gaps = 1/64 (1%)
Query: 1 MNAILNKNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIYMCDKHKQKPATIASKRMFD 60
+NAILN S K C++Y SLFPCNEC K IIQSGI+EV+Y+ DK+ +T ASKRM
Sbjct: 76 LNAILNA-STSLKGCRIYVSLFPCNECCKAIIQSGIREVVYLSDKYAATDSTKASKRMLA 134
Query: 61 AAKV 64
+A V
Sbjct: 135 SAGV 138
>gi|295102170|emb|CBK99715.1| Deoxycytidylate deaminase [Faecalibacterium prausnitzii L2-6]
Length = 159
Score = 141 bits (355), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 65/120 (54%), Positives = 81/120 (67%), Gaps = 4/120 (3%)
Query: 87 DVLEWHEYFMASAFLVAKRSKDPVTRVGAVIVNEDNKIVGTGYNGMPIGCSDDEFPWDKN 146
D + W EYFM A L A RSKDP ++VGA IV+ +NKI+ GYNGMPIGC DD PW++
Sbjct: 5 DYINWDEYFMGIALLTAMRSKDPSSQVGACIVSPENKILSLGYNGMPIGCDDDAMPWERE 64
Query: 147 THD----ELDMCHAEMNAILNKNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIYMCDK 202
+ +CHAE+NAILN + K ++Y +LFPCNEC K IIQSGI EV+Y DK
Sbjct: 65 GEPLNTKYMYVCHAELNAILNSAHNNLKGARVYVTLFPCNECTKAIIQSGIAEVVYYSDK 124
Score = 70.1 bits (170), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 31/65 (47%), Positives = 43/65 (66%)
Query: 1 MNAILNKNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIYMCDKHKQKPATIASKRMFD 60
+NAILN + K ++Y +LFPCNEC K IIQSGI EV+Y DK+ +++A++ MF
Sbjct: 80 LNAILNSAHNNLKGARVYVTLFPCNECTKAIIQSGIAEVVYYSDKYHDTDSSVAARFMFQ 139
Query: 61 AAKVH 65
A V
Sbjct: 140 KAGVR 144
>gi|429736525|ref|ZP_19270420.1| cytidine and deoxycytidylate deaminase zinc-binding region
[Selenomonas sp. oral taxon 138 str. F0429]
gi|429154822|gb|EKX97533.1| cytidine and deoxycytidylate deaminase zinc-binding region
[Selenomonas sp. oral taxon 138 str. F0429]
Length = 158
Score = 141 bits (355), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 68/119 (57%), Positives = 80/119 (67%), Gaps = 5/119 (4%)
Query: 88 VLEWHEYFMASAFLVAKRSKDPVTRVGAVIVNEDNKIVGTGYNGMPIGCSDDEFPWDKNT 147
++ W EYFM A A RSKDP T+VGA IVNED IVG GYNGMP GC D E+PW +
Sbjct: 2 IISWDEYFMGVAIFSAYRSKDPHTQVGACIVNEDKHIVGVGYNGMPNGCDDREYPWGRTG 61
Query: 148 HDELD----MCHAEMNAILNKNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIYMCDK 202
+ HAE+NAILN S K C++Y SLFPCNEC K IIQSGI+EV+Y+ DK
Sbjct: 62 EFAEQKYPYVVHAELNAILNA-STSLKGCRIYVSLFPCNECCKAIIQSGIREVVYLSDK 119
Score = 83.6 bits (205), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 42/75 (56%), Positives = 51/75 (68%), Gaps = 2/75 (2%)
Query: 1 MNAILNKNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIYMCDKHKQKPATIASKRMFD 60
+NAILN S K C++Y SLFPCNEC K IIQSGI+EV+Y+ DK+ AT SKRMFD
Sbjct: 76 LNAILNA-STSLKGCRIYVSLFPCNECCKAIIQSGIREVVYLSDKYAATEATKISKRMFD 134
Query: 61 AAKVHYWSEMDKMNG 75
+A V W M+ G
Sbjct: 135 SAGVR-WRRMETELG 148
>gi|238922541|ref|YP_002936054.1| dCMP deaminase [Eubacterium rectale ATCC 33656]
gi|238874213|gb|ACR73920.1| dCMP deaminase [Eubacterium rectale ATCC 33656]
Length = 161
Score = 141 bits (355), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 67/126 (53%), Positives = 83/126 (65%), Gaps = 3/126 (2%)
Query: 79 GSPHKRVDDVLEWHEYFMASAFLVAKRSKDPVTRVGAVIVNEDNKIVGTGYNGMPIGCSD 138
G+ KR D + W EYFM A L RSKDP T+VGA IV+ ++KI+ GYNG P+GCSD
Sbjct: 2 GASEKR-KDYISWDEYFMGIAMLSGMRSKDPNTQVGACIVDPEHKILSMGYNGFPLGCSD 60
Query: 139 DEFPWDKNTHDE--LDMCHAEMNAILNKNSADTKRCKLYTSLFPCNECAKVIIQSGIKEV 196
DEF W + D H+E+NAILN + +Y +LFPCNECAK IIQSGI+EV
Sbjct: 61 DEFTWAREGEDNKYFYSTHSELNAILNYRGGSLEGATIYVTLFPCNECAKAIIQSGIREV 120
Query: 197 IYMCDK 202
+Y CDK
Sbjct: 121 VYDCDK 126
Score = 78.6 bits (192), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 35/64 (54%), Positives = 44/64 (68%)
Query: 1 MNAILNKNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIYMCDKHKQKPATIASKRMFD 60
+NAILN + +Y +LFPCNECAK IIQSGI+EV+Y CDK++ + ASKRM
Sbjct: 82 LNAILNYRGGSLEGATIYVTLFPCNECAKAIIQSGIREVVYDCDKYEGTASVTASKRMLR 141
Query: 61 AAKV 64
AA V
Sbjct: 142 AAGV 145
>gi|334126984|ref|ZP_08500920.1| competence protein comEB [Centipeda periodontii DSM 2778]
gi|333390286|gb|EGK61426.1| competence protein comEB [Centipeda periodontii DSM 2778]
Length = 160
Score = 141 bits (355), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 70/120 (58%), Positives = 83/120 (69%), Gaps = 7/120 (5%)
Query: 88 VLEWHEYFMASAFLVAKRSKDPVTRVGAVIVNEDNKIVGTGYNGMPIGCSDDEFPWDKNT 147
++ W EYFM A A RSKDP T+VGA IVNED IVG GYNGMP GC D E+PW + T
Sbjct: 2 IISWDEYFMGVAIFSAYRSKDPHTQVGACIVNEDKHIVGVGYNGMPNGCDDREYPWGR-T 60
Query: 148 HDELD-----MCHAEMNAILNKNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIYMCDK 202
D + + HAE+NAILN S K C++Y SLFPCNEC K IIQSGI+EV+Y+ DK
Sbjct: 61 GDFAEQKYPYVVHAELNAILNA-STSLKGCRIYVSLFPCNECCKAIIQSGIREVVYLSDK 119
Score = 79.7 bits (195), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 40/71 (56%), Positives = 49/71 (69%), Gaps = 2/71 (2%)
Query: 1 MNAILNKNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIYMCDKHKQKPATIASKRMFD 60
+NAILN S K C++Y SLFPCNEC K IIQSGI+EV+Y+ DK+ A SKRMFD
Sbjct: 76 LNAILNA-STSLKGCRIYVSLFPCNECCKAIIQSGIREVVYLSDKYAALDAIKISKRMFD 134
Query: 61 AAKVHYWSEMD 71
+A V W M+
Sbjct: 135 SAGVK-WRRME 144
>gi|291526381|emb|CBK91968.1| Deoxycytidylate deaminase [Eubacterium rectale DSM 17629]
gi|291526826|emb|CBK92412.1| Deoxycytidylate deaminase [Eubacterium rectale M104/1]
Length = 161
Score = 141 bits (355), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 67/126 (53%), Positives = 83/126 (65%), Gaps = 3/126 (2%)
Query: 79 GSPHKRVDDVLEWHEYFMASAFLVAKRSKDPVTRVGAVIVNEDNKIVGTGYNGMPIGCSD 138
G+ KR D + W EYFM A L RSKDP T+VGA IV+ ++KI+ GYNG P+GCSD
Sbjct: 2 GASEKR-KDYISWDEYFMGIAMLSGMRSKDPNTQVGACIVDPEHKILSMGYNGFPLGCSD 60
Query: 139 DEFPWDKNTHDE--LDMCHAEMNAILNKNSADTKRCKLYTSLFPCNECAKVIIQSGIKEV 196
DEF W + D H+E+NAILN + +Y +LFPCNECAK IIQSGI+EV
Sbjct: 61 DEFTWAREGEDNKYFYSTHSELNAILNYRGGSLEGATIYVTLFPCNECAKAIIQSGIREV 120
Query: 197 IYMCDK 202
+Y CDK
Sbjct: 121 VYDCDK 126
Score = 78.6 bits (192), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 35/64 (54%), Positives = 44/64 (68%)
Query: 1 MNAILNKNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIYMCDKHKQKPATIASKRMFD 60
+NAILN + +Y +LFPCNECAK IIQSGI+EV+Y CDK++ + ASKRM
Sbjct: 82 LNAILNYRGGSLEGATIYVTLFPCNECAKAIIQSGIREVVYDCDKYEGTASVTASKRMLK 141
Query: 61 AAKV 64
AA V
Sbjct: 142 AAGV 145
>gi|289450291|ref|YP_003474389.1| cytidine and deoxycytidylate deaminase zinc-binding region
[Clostridiales genomosp. BVAB3 str. UPII9-5]
gi|289184838|gb|ADC91263.1| cytidine and deoxycytidylate deaminase zinc-binding region
[Clostridiales genomosp. BVAB3 str. UPII9-5]
Length = 165
Score = 140 bits (354), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 66/124 (53%), Positives = 85/124 (68%), Gaps = 6/124 (4%)
Query: 87 DVLEWHEYFMASAFLVAKRSKDPVTRVGAVIVNEDNKIVGTGYNGMPIGCSDDEFPWDKN 146
+ L W EYFM A L A+RSKDP T+VGA IV+ +N+I+ GYNG+P GCSD+ FPW++
Sbjct: 6 EYLSWDEYFMGVALLSAQRSKDPNTQVGACIVSPNNRIISVGYNGLPYGCSDETFPWERE 65
Query: 147 THDELD-----MCHAEMNAILNKNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIYMCD 201
D L +CHAE+NAILN A ++Y LFPCNEC+K IIQ+G+ EVIY+ D
Sbjct: 66 G-DYLSTKYPYVCHAELNAILNNPGAILHGARIYVDLFPCNECSKAIIQAGLVEVIYLSD 124
Query: 202 KQMS 205
K S
Sbjct: 125 KYAS 128
Score = 75.9 bits (185), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 36/66 (54%), Positives = 44/66 (66%)
Query: 1 MNAILNKNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIYMCDKHKQKPATIASKRMFD 60
+NAILN A ++Y LFPCNEC+K IIQ+G+ EVIY+ DK+ A ASKRM D
Sbjct: 81 LNAILNNPGAILHGARIYVDLFPCNECSKAIIQAGLVEVIYLSDKYASTDAVKASKRMMD 140
Query: 61 AAKVHY 66
AA V Y
Sbjct: 141 AAGVKY 146
>gi|295093723|emb|CBK82814.1| Deoxycytidylate deaminase [Coprococcus sp. ART55/1]
Length = 159
Score = 140 bits (354), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 64/120 (53%), Positives = 84/120 (70%), Gaps = 4/120 (3%)
Query: 87 DVLEWHEYFMASAFLVAKRSKDPVTRVGAVIVNEDNKIVGTGYNGMPIGCSDDEFPWDKN 146
D + W +YFM A + A+RSKDP T+VGA IV+++N+I+ GYNGMP GC DD PW K+
Sbjct: 5 DYISWDQYFMGIAMMSAERSKDPSTQVGACIVDKNNRILSMGYNGMPAGCDDDTMPWGKS 64
Query: 147 T----HDELDMCHAEMNAILNKNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIYMCDK 202
+ +CHAE+N+ILN + K +Y++LFPCNECAK IIQ GIKEV+YM DK
Sbjct: 65 GAPLDNKYFYVCHAELNSILNYRGGNLKDAIIYSTLFPCNECAKAIIQCGIKEVVYMSDK 124
Score = 82.8 bits (203), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 38/66 (57%), Positives = 48/66 (72%)
Query: 1 MNAILNKNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIYMCDKHKQKPATIASKRMFD 60
+N+ILN + K +Y++LFPCNECAK IIQ GIKEV+YM DK+ +TIASK+MFD
Sbjct: 80 LNSILNYRGGNLKDAIIYSTLFPCNECAKAIIQCGIKEVVYMSDKYAMTESTIASKKMFD 139
Query: 61 AAKVHY 66
A V Y
Sbjct: 140 MAGVAY 145
>gi|389576504|ref|ZP_10166532.1| deoxycytidylate deaminase [Eubacterium cellulosolvens 6]
gi|389311989|gb|EIM56922.1| deoxycytidylate deaminase [Eubacterium cellulosolvens 6]
Length = 162
Score = 140 bits (354), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 67/121 (55%), Positives = 81/121 (66%), Gaps = 5/121 (4%)
Query: 87 DVLEWHEYFMASAFLVAKRSKDPVTRVGAVIVNEDNKIVGTGYNGMPIGCSDDEFPWDKN 146
D + W EYFMA A L RSKDP ++VG+ IV+ DNKI+ GYNG P GCSD+EFPW +
Sbjct: 7 DYISWDEYFMAVARLAGMRSKDPNSQVGSCIVSPDNKILSIGYNGFPRGCSDEEFPWSRE 66
Query: 147 THDELD-----MCHAEMNAILNKNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIYMCD 201
D L + H+E+NAILN + KLY SLFPCNECAK IIQ+GIK VIY +
Sbjct: 67 DEDPLRTKYVYVTHSELNAILNYRGGSLEGSKLYVSLFPCNECAKAIIQAGIKTVIYAEN 126
Query: 202 K 202
K
Sbjct: 127 K 127
Score = 77.0 bits (188), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 37/65 (56%), Positives = 44/65 (67%)
Query: 1 MNAILNKNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIYMCDKHKQKPATIASKRMFD 60
+NAILN + KLY SLFPCNECAK IIQ+GIK VIY +K++ PA AS+ MF
Sbjct: 83 LNAILNYRGGSLEGSKLYVSLFPCNECAKAIIQAGIKTVIYAENKYEGTPAVTASQMMFA 142
Query: 61 AAKVH 65
AA V
Sbjct: 143 AAGVE 147
>gi|402591910|gb|EJW85839.1| dCMP deaminase [Wuchereria bancrofti]
Length = 150
Score = 140 bits (354), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 65/113 (57%), Positives = 83/113 (73%), Gaps = 5/113 (4%)
Query: 96 MASAFLVAKRSKDPVTRVGAVIVNEDNKIVGTGYNGMPIGCSDDEFPWDKNTHDELD--- 152
M A + A RSKDP+T+VGAVIVN+D +IVG+GYNGMP GCSDD PW K + + L+
Sbjct: 1 MGVAHMAALRSKDPITQVGAVIVNQDKRIVGSGYNGMPTGCSDDILPWGKGSENFLENKS 60
Query: 153 --MCHAEMNAILNKNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIYMCDKQ 203
+CHAE+NAILNK K +YT LFPCNECAK+IIQ+GI EV++ +K+
Sbjct: 61 AYVCHAELNAILNKIVGSIKGSTIYTVLFPCNECAKLIIQAGISEVVFQREKE 113
Score = 75.9 bits (185), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 42/83 (50%), Positives = 52/83 (62%), Gaps = 6/83 (7%)
Query: 1 MNAILNKNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIYMCDKHKQKPATIASKRMFD 60
+NAILNK K +YT LFPCNECAK+IIQ+GI EV++ +K K K TIASKRMFD
Sbjct: 68 LNAILNKIVGSIKGSTIYTVLFPCNECAKLIIQAGISEVVFQREKEK-KVNTIASKRMFD 126
Query: 61 AAKV-----HYWSEMDKMNGVQN 78
A V H ++ + N N
Sbjct: 127 LAGVISLHFHSFTPLFGFNDFDN 149
>gi|242058805|ref|XP_002458548.1| hypothetical protein SORBIDRAFT_03g035540 [Sorghum bicolor]
gi|241930523|gb|EES03668.1| hypothetical protein SORBIDRAFT_03g035540 [Sorghum bicolor]
Length = 228
Score = 140 bits (354), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 67/131 (51%), Positives = 89/131 (67%), Gaps = 8/131 (6%)
Query: 81 PHKRVDDVLEWHEYFMASAFLVAKRSKDPVTRVGAVIVNEDNKIVGTGYNGMPIGCSDDE 140
P KR + + W +YFMA AFL A+RSKDP +VGA +V+++ I+G GYNG P GCSDD+
Sbjct: 61 PAKR-EGYISWDDYFMAIAFLSAERSKDPNRQVGACLVSQEGIILGIGYNGFPRGCSDDK 119
Query: 141 FPWDKNTHDELDM-------CHAEMNAILNKNSADTKRCKLYTSLFPCNECAKVIIQSGI 193
PW K + + + HAE+NAILN N A KLY ++FPCNECAK+IIQSG+
Sbjct: 120 LPWAKKSANGNPLETKFPYVVHAEVNAILNTNHASAAGQKLYVTMFPCNECAKIIIQSGV 179
Query: 194 KEVIYMCDKQM 204
EVIY +K++
Sbjct: 180 SEVIYFVEKKI 190
Score = 65.5 bits (158), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 33/75 (44%), Positives = 44/75 (58%), Gaps = 2/75 (2%)
Query: 1 MNAILNKNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIYMCDKHKQKPA--TIASKRM 58
+NAILN N A KLY ++FPCNECAK+IIQSG+ EVIY +K A +AS ++
Sbjct: 144 VNAILNTNHASAAGQKLYVTMFPCNECAKIIIQSGVSEVIYFVEKKIDNSAHVYVASHKL 203
Query: 59 FDAAKVHYWSEMDKM 73
A + +M
Sbjct: 204 LSMAGIKVRKHQPQM 218
>gi|303289711|ref|XP_003064143.1| cytidine and deoxycytidylate deaminase zinc-binding protein
[Micromonas pusilla CCMP1545]
gi|226454459|gb|EEH51765.1| cytidine and deoxycytidylate deaminase zinc-binding protein
[Micromonas pusilla CCMP1545]
Length = 371
Score = 140 bits (353), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 67/123 (54%), Positives = 82/123 (66%), Gaps = 7/123 (5%)
Query: 87 DVLEWHEYFMASAFLVAKRSKDPVTRVGAVIVNEDNKIVGTGYNGMPIGCSDDEFPWDKN 146
D L W +YFM+ AFL A+RSKDP +VGAVIV D I G GYNG P GCSD PW K
Sbjct: 131 DYLSWDDYFMSVAFLSAQRSKDPNKQVGAVIVGADKVISGVGYNGFPRGCSDRSLPWAKR 190
Query: 147 --THDELD-----MCHAEMNAILNKNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIYM 199
T D ++ +CHAEMNAI+NKNS +Y +++PCNEC+K+IIQSGI EV+Y
Sbjct: 191 SPTDDPMETKYAYVCHAEMNAIMNKNSQSLNGATMYVTMYPCNECSKLIIQSGITEVVYF 250
Query: 200 CDK 202
K
Sbjct: 251 EGK 253
Score = 60.1 bits (144), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 25/45 (55%), Positives = 33/45 (73%)
Query: 1 MNAILNKNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIYMCDK 45
MNAI+NKNS +Y +++PCNEC+K+IIQSGI EV+Y K
Sbjct: 209 MNAIMNKNSQSLNGATMYVTMYPCNECSKLIIQSGITEVVYFEGK 253
>gi|358466633|ref|ZP_09176435.1| hypothetical protein HMPREF9093_00907 [Fusobacterium sp. oral taxon
370 str. F0437]
gi|357068847|gb|EHI78823.1| hypothetical protein HMPREF9093_00907 [Fusobacterium sp. oral taxon
370 str. F0437]
Length = 160
Score = 140 bits (353), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 67/122 (54%), Positives = 88/122 (72%), Gaps = 7/122 (5%)
Query: 86 DDVLEWHEYFMASAFLVAKRSKDPVTRVGAVIVNEDNKIVGTGYNGMPIGCSDDEFPWDK 145
++ ++W YFM A L + RSKDP T+VGA IVNED +IVG GYNG+P GC D +FPW++
Sbjct: 3 ENYIDWDSYFMGIALLSSMRSKDPNTQVGACIVNEDKRIVGVGYNGLPKGCEDTDFPWER 62
Query: 146 NTHDELD-----MCHAEMNAILNKNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIYMC 200
+ LD +CHAE+NAILN + K C +Y +LFPCNEC+K IIQSGIKE++Y+
Sbjct: 63 E-GEFLDTKYPYVCHAELNAILNSIKS-LKDCVIYVALFPCNECSKAIIQSGIKEIVYLS 120
Query: 201 DK 202
DK
Sbjct: 121 DK 122
Score = 75.1 bits (183), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 36/66 (54%), Positives = 47/66 (71%), Gaps = 1/66 (1%)
Query: 1 MNAILNKNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIYMCDKHKQKPATIASKRMFD 60
+NAILN + K C +Y +LFPCNEC+K IIQSGIKE++Y+ DK+ A ASK+M D
Sbjct: 79 LNAILNSIKS-LKDCVIYVALFPCNECSKAIIQSGIKEIVYLSDKYDGTDANRASKKMLD 137
Query: 61 AAKVHY 66
+A V Y
Sbjct: 138 SAGVKY 143
>gi|262067377|ref|ZP_06026989.1| putative deoxycytidylate deaminase [Fusobacterium periodonticum
ATCC 33693]
gi|291378940|gb|EFE86458.1| putative deoxycytidylate deaminase [Fusobacterium periodonticum
ATCC 33693]
Length = 160
Score = 140 bits (353), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 67/122 (54%), Positives = 88/122 (72%), Gaps = 7/122 (5%)
Query: 86 DDVLEWHEYFMASAFLVAKRSKDPVTRVGAVIVNEDNKIVGTGYNGMPIGCSDDEFPWDK 145
++ ++W YFM A L + RSKDP T+VGA IVNED +IVG GYNG+P GC D +FPW++
Sbjct: 3 ENYIDWDSYFMGIALLSSMRSKDPNTQVGACIVNEDKRIVGVGYNGLPKGCEDTDFPWER 62
Query: 146 NTHDELD-----MCHAEMNAILNKNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIYMC 200
D L+ +CHAE+NAILN + K C +Y +LFPCNEC+K IIQSGIKE++Y+
Sbjct: 63 E-GDFLETKYPYVCHAELNAILNSIKS-LKDCVIYVALFPCNECSKAIIQSGIKEIVYLS 120
Query: 201 DK 202
DK
Sbjct: 121 DK 122
Score = 75.1 bits (183), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 36/66 (54%), Positives = 47/66 (71%), Gaps = 1/66 (1%)
Query: 1 MNAILNKNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIYMCDKHKQKPATIASKRMFD 60
+NAILN + K C +Y +LFPCNEC+K IIQSGIKE++Y+ DK+ A ASK+M D
Sbjct: 79 LNAILNSIKS-LKDCVIYVALFPCNECSKAIIQSGIKEIVYLSDKYDGTDANRASKKMLD 137
Query: 61 AAKVHY 66
+A V Y
Sbjct: 138 SAGVKY 143
>gi|294781966|ref|ZP_06747298.1| deoxycytidylate deaminase [Fusobacterium sp. 1_1_41FAA]
gi|294481777|gb|EFG29546.1| deoxycytidylate deaminase [Fusobacterium sp. 1_1_41FAA]
Length = 160
Score = 140 bits (353), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 67/122 (54%), Positives = 88/122 (72%), Gaps = 7/122 (5%)
Query: 86 DDVLEWHEYFMASAFLVAKRSKDPVTRVGAVIVNEDNKIVGTGYNGMPIGCSDDEFPWDK 145
++ ++W YFM A L + RSKDP T+VGA IVNED +IVG GYNG+P GC D +FPW++
Sbjct: 3 ENYIDWDSYFMGIALLSSMRSKDPNTQVGACIVNEDKRIVGVGYNGLPKGCEDTDFPWER 62
Query: 146 NTHDELD-----MCHAEMNAILNKNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIYMC 200
D L+ +CHAE+NAILN + K C +Y +LFPCNEC+K IIQSGIKE++Y+
Sbjct: 63 E-GDFLETKYPYVCHAELNAILNSIKS-LKDCIIYVALFPCNECSKAIIQSGIKEIVYLS 120
Query: 201 DK 202
DK
Sbjct: 121 DK 122
Score = 73.6 bits (179), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 38/76 (50%), Positives = 50/76 (65%), Gaps = 4/76 (5%)
Query: 1 MNAILNKNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIYMCDKHKQKPATIASKRMFD 60
+NAILN + K C +Y +LFPCNEC+K IIQSGIKE++Y+ DK+ ASK+M D
Sbjct: 79 LNAILNSIKS-LKDCIIYVALFPCNECSKAIIQSGIKEIVYLSDKYDGTDTNRASKKMLD 137
Query: 61 AAKVHYWS---EMDKM 73
+A V Y MDK+
Sbjct: 138 SAGVKYRQFTPNMDKL 153
>gi|373469622|ref|ZP_09560803.1| cytidine and deoxycytidylate deaminase zinc-binding region
[Lachnospiraceae bacterium oral taxon 082 str. F0431]
gi|371764114|gb|EHO52538.1| cytidine and deoxycytidylate deaminase zinc-binding region
[Lachnospiraceae bacterium oral taxon 082 str. F0431]
Length = 164
Score = 140 bits (353), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 68/127 (53%), Positives = 85/127 (66%), Gaps = 7/127 (5%)
Query: 83 KRVDDVLEWHEYFMASAFLVAKRSKDPVTRVGAVIVNEDNKIVGTGYNGMPIGCSDDEFP 142
++ +D + W EYF+ A L AKRSKDP T+VGA IV+EDNKI+ GYNG P GCSD+EFP
Sbjct: 3 EKREDYINWDEYFIGVAKLSAKRSKDPNTQVGACIVSEDNKILSMGYNGFPRGCSDEEFP 62
Query: 143 WDKNTH-------DELDMCHAEMNAILNKNSADTKRCKLYTSLFPCNECAKVIIQSGIKE 195
W K+ L H+E+NAILN + K+Y +LFPCNECAK IIQ+GIK
Sbjct: 63 WGKDLELSDPYNAKYLYSTHSELNAILNYRGGSLEGSKIYVTLFPCNECAKAIIQAGIKT 122
Query: 196 VIYMCDK 202
+IY DK
Sbjct: 123 IIYEDDK 129
Score = 79.7 bits (195), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 36/67 (53%), Positives = 46/67 (68%)
Query: 1 MNAILNKNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIYMCDKHKQKPATIASKRMFD 60
+NAILN + K+Y +LFPCNECAK IIQ+GIK +IY DK+ P+ ASKRM +
Sbjct: 85 LNAILNYRGGSLEGSKIYVTLFPCNECAKAIIQAGIKTIIYEDDKYANSPSVRASKRMLN 144
Query: 61 AAKVHYW 67
AA V Y+
Sbjct: 145 AAGVRYY 151
>gi|315652209|ref|ZP_07905204.1| deoxycytidylate deaminase [Lachnoanaerobaculum saburreum DSM 3986]
gi|419719474|ref|ZP_14246753.1| cytidine and deoxycytidylate deaminase zinc-binding region
[Lachnoanaerobaculum saburreum F0468]
gi|315485515|gb|EFU75902.1| deoxycytidylate deaminase [Lachnoanaerobaculum saburreum DSM 3986]
gi|383304387|gb|EIC95793.1| cytidine and deoxycytidylate deaminase zinc-binding region
[Lachnoanaerobaculum saburreum F0468]
Length = 164
Score = 140 bits (352), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 68/127 (53%), Positives = 85/127 (66%), Gaps = 7/127 (5%)
Query: 83 KRVDDVLEWHEYFMASAFLVAKRSKDPVTRVGAVIVNEDNKIVGTGYNGMPIGCSDDEFP 142
++ +D + W EYF+ A L AKRSKDP T+VGA IV+EDNKI+ GYNG P GCSD+EFP
Sbjct: 3 EKREDYINWDEYFIGVAKLSAKRSKDPNTQVGACIVSEDNKILSMGYNGFPRGCSDEEFP 62
Query: 143 WDKNTH-------DELDMCHAEMNAILNKNSADTKRCKLYTSLFPCNECAKVIIQSGIKE 195
W K+ L H+E+NAILN + K+Y +LFPCNECAK IIQ+GIK
Sbjct: 63 WGKDLEISDPYNAKYLYSTHSELNAILNYRGGSLEGSKIYVTLFPCNECAKAIIQAGIKT 122
Query: 196 VIYMCDK 202
+IY DK
Sbjct: 123 IIYEDDK 129
Score = 79.7 bits (195), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 36/67 (53%), Positives = 46/67 (68%)
Query: 1 MNAILNKNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIYMCDKHKQKPATIASKRMFD 60
+NAILN + K+Y +LFPCNECAK IIQ+GIK +IY DK+ P+ ASKRM +
Sbjct: 85 LNAILNYRGGSLEGSKIYVTLFPCNECAKAIIQAGIKTIIYEDDKYADSPSVRASKRMLN 144
Query: 61 AAKVHYW 67
AA V Y+
Sbjct: 145 AAGVRYY 151
>gi|326522122|dbj|BAK04189.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 233
Score = 140 bits (352), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 66/126 (52%), Positives = 88/126 (69%), Gaps = 7/126 (5%)
Query: 86 DDVLEWHEYFMASAFLVAKRSKDPVTRVGAVIVNEDNKIVGTGYNGMPIGCSDDEFPWDK 145
+ + W +YFMA AFL A+RSKDP +VGA +V+++ I+G GYNG P GCSDD+ PW K
Sbjct: 68 EGFISWDDYFMAIAFLSAERSKDPNRQVGACLVSQEGIILGIGYNGFPRGCSDDKLPWAK 127
Query: 146 NT--HDELD-----MCHAEMNAILNKNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIY 198
+ D L+ + HAE+NAILN N A KLY ++FPCNECAK+IIQSG+ EVIY
Sbjct: 128 KSARGDPLETKYPYVVHAEVNAILNTNHASAAGQKLYVTMFPCNECAKIIIQSGVSEVIY 187
Query: 199 MCDKQM 204
+K++
Sbjct: 188 FVEKRI 193
Score = 64.7 bits (156), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 28/45 (62%), Positives = 34/45 (75%)
Query: 1 MNAILNKNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIYMCDK 45
+NAILN N A KLY ++FPCNECAK+IIQSG+ EVIY +K
Sbjct: 147 VNAILNTNHASAAGQKLYVTMFPCNECAKIIIQSGVSEVIYFVEK 191
>gi|42561111|ref|NP_975562.1| dCMP deaminase [Mycoplasma mycoides subsp. mycoides SC str. PG1]
gi|42492608|emb|CAE77204.1| dCMP deaminase [Mycoplasma mycoides subsp. mycoides SC str. PG1]
gi|256384072|gb|ACU78642.1| deoxycytidylate deaminase [Mycoplasma mycoides subsp. capri str.
GM12]
gi|256384904|gb|ACU79473.1| deoxycytidylate deaminase [Mycoplasma mycoides subsp. capri str.
GM12]
gi|296455570|gb|ADH21805.1| deoxycytidylate deaminase (dCMP deaminase) [synthetic Mycoplasma
mycoides JCVI-syn1.0]
gi|301320471|gb|ADK69114.1| cytidine and deoxycytidylate deaminase zinc-binding region
[Mycoplasma mycoides subsp. mycoides SC str. Gladysdale]
Length = 160
Score = 140 bits (352), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 68/120 (56%), Positives = 81/120 (67%), Gaps = 6/120 (5%)
Query: 87 DVLEWHEYFMASAFLVAKRSKDPVTRVGAVIVNEDNKIVGTGYNGMPIGCSDDEFPWDKN 146
D L W YFM A A RSKDP T+VGA++VNE +IV TGYNG P G SDDEFPW KN
Sbjct: 6 DYLSWQHYFMLIAKASAMRSKDPNTQVGAIVVNELQQIVATGYNGFPRGVSDDEFPWSKN 65
Query: 147 THDELD-----MCHAEMNAILNKNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIYMCD 201
D L+ + HAE+NAI++ S D C LY +LFPCNECAK+IIQ+GIK + Y D
Sbjct: 66 NEDWLENKYAYVAHAELNAIVSSRS-DLSNCDLYVTLFPCNECAKIIIQAGIKRIYYAND 124
Score = 72.0 bits (175), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 34/66 (51%), Positives = 44/66 (66%), Gaps = 1/66 (1%)
Query: 1 MNAILNKNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIYMCDKHKQKPATIASKRMFD 60
+NAI++ S D C LY +LFPCNECAK+IIQ+GIK + Y D + K IASK+M D
Sbjct: 82 LNAIVSSRS-DLSNCDLYVTLFPCNECAKIIIQAGIKRIYYANDPYHDKKEFIASKKMLD 140
Query: 61 AAKVHY 66
A + Y
Sbjct: 141 AVNIKY 146
>gi|291521321|emb|CBK79614.1| Deoxycytidylate deaminase [Coprococcus catus GD/7]
Length = 161
Score = 139 bits (351), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 67/121 (55%), Positives = 82/121 (67%), Gaps = 6/121 (4%)
Query: 87 DVLEWHEYFMASAFLVAKRSKDPVTRVGAVIVNEDNKIVGTGYNGMPIGCSDDEFPWDKN 146
D + W EYFM A L RSKDP ++VG+ IV+ DNKI+ GYNG P GCSDD FPW +
Sbjct: 7 DYISWDEYFMGVAKLAGLRSKDPNSQVGSCIVSPDNKILSIGYNGFPRGCSDDVFPWSRE 66
Query: 147 THDELD-----MCHAEMNAILNKNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIYMCD 201
DELD + H+E+NAILN + K+Y SLFPCNEC+K IIQSGI+E+IY D
Sbjct: 67 G-DELDTKYFYVTHSELNAILNYRGGSLEGSKIYVSLFPCNECSKAIIQSGIREIIYDSD 125
Query: 202 K 202
K
Sbjct: 126 K 126
Score = 88.6 bits (218), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 39/66 (59%), Positives = 48/66 (72%)
Query: 1 MNAILNKNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIYMCDKHKQKPATIASKRMFD 60
+NAILN + K+Y SLFPCNEC+K IIQSGI+E+IY DK+ PA IAS++M D
Sbjct: 82 LNAILNYRGGSLEGSKIYVSLFPCNECSKAIIQSGIREIIYDSDKYGDTPAVIASRKMLD 141
Query: 61 AAKVHY 66
AA VHY
Sbjct: 142 AAGVHY 147
>gi|260890091|ref|ZP_05901354.1| hypothetical protein GCWU000323_01253 [Leptotrichia hofstadii
F0254]
gi|260860114|gb|EEX74614.1| putative deoxycytidylate deaminase [Leptotrichia hofstadii F0254]
Length = 161
Score = 139 bits (351), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 69/125 (55%), Positives = 85/125 (68%), Gaps = 7/125 (5%)
Query: 86 DDVLEWHEYFMASAFLVAKRSKDPVTRVGAVIVNEDNKIVGTGYNGMPIGCSDDEFPWDK 145
D+ L W EYFM AFL RSKDP T+VGA I++ED KI+G GYNG P+G SDD PW K
Sbjct: 5 DNYLSWDEYFMGIAFLSGMRSKDPSTQVGACIIDEDKKIIGIGYNGFPMGSSDDSMPWGK 64
Query: 146 NTHDELD-----MCHAEMNAILNKNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIYMC 200
+ L+ + HAE+NAILN + K+C +Y + FPCNECAK I+QSGIK+VIY
Sbjct: 65 EG-EFLETKYPYVVHAELNAILNSIKS-LKKCTIYVTHFPCNECAKAIVQSGIKKVIYFS 122
Query: 201 DKQMS 205
DK S
Sbjct: 123 DKHKS 127
Score = 77.0 bits (188), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 37/64 (57%), Positives = 48/64 (75%), Gaps = 1/64 (1%)
Query: 1 MNAILNKNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIYMCDKHKQKPATIASKRMFD 60
+NAILN + K+C +Y + FPCNECAK I+QSGIK+VIY DKHK +T ASKR+F+
Sbjct: 81 LNAILNSIKS-LKKCTIYVTHFPCNECAKAIVQSGIKKVIYFSDKHKSLDSTKASKRIFE 139
Query: 61 AAKV 64
A+V
Sbjct: 140 NARV 143
>gi|167755827|ref|ZP_02427954.1| hypothetical protein CLORAM_01343 [Clostridium ramosum DSM 1402]
gi|237734796|ref|ZP_04565277.1| deoxycytidylate deaminase [Mollicutes bacterium D7]
gi|365831521|ref|ZP_09373073.1| hypothetical protein HMPREF1021_01837 [Coprobacillus sp. 3_3_56FAA]
gi|167704766|gb|EDS19345.1| cytidine and deoxycytidylate deaminase zinc-binding region
[Clostridium ramosum DSM 1402]
gi|229382124|gb|EEO32215.1| deoxycytidylate deaminase [Coprobacillus sp. D7]
gi|365261998|gb|EHM91899.1| hypothetical protein HMPREF1021_01837 [Coprobacillus sp. 3_3_56FAA]
Length = 154
Score = 139 bits (351), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 68/120 (56%), Positives = 84/120 (70%), Gaps = 6/120 (5%)
Query: 88 VLEWHEYFMASAFLVAKRSKDPVTRVGAVIVNEDNKIVGTGYNGMPIGCSDDEFPWDKNT 147
V+ W +YFM A L A RSKDP T+VGA IVNE NKIVG GYNG+P GC D+EFPW+
Sbjct: 4 VINWTQYFMGVAKLSAFRSKDPNTQVGACIVNEANKIVGVGYNGLPWGCEDNEFPWEVRE 63
Query: 148 HDELD-----MCHAEMNAILNKNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIYMCDK 202
D + + HAE+NAILN ++ K C++Y SLFPC+EC K IIQSGI E++Y DK
Sbjct: 64 GDLYETKYPYVVHAELNAILN-STGQLKGCRIYVSLFPCHECVKAIIQSGISEIVYEDDK 122
Score = 75.1 bits (183), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 36/66 (54%), Positives = 47/66 (71%), Gaps = 1/66 (1%)
Query: 1 MNAILNKNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIYMCDKHKQKPATIASKRMFD 60
+NAILN ++ K C++Y SLFPC+EC K IIQSGI E++Y DK+K + A+KRM D
Sbjct: 79 LNAILN-STGQLKGCRIYVSLFPCHECVKAIIQSGISEIVYEDDKYKGTDSDRAAKRMLD 137
Query: 61 AAKVHY 66
AA V Y
Sbjct: 138 AAGVKY 143
>gi|339233186|ref|XP_003381710.1| putative deoxycytidylate deaminase [Trichinella spiralis]
gi|316979440|gb|EFV62236.1| putative deoxycytidylate deaminase [Trichinella spiralis]
Length = 165
Score = 139 bits (350), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 63/121 (52%), Positives = 85/121 (70%), Gaps = 5/121 (4%)
Query: 88 VLEWHEYFMASAFLVAKRSKDPVTRVGAVIVNEDNKIVGTGYNGMPIGCSDDEFPWDKNT 147
L+ +FM A L +KRSKDPVT+VGA I N + I+ TGYNGMP+GC D+ PW K+
Sbjct: 2 TLDTESFFMGIACLSSKRSKDPVTQVGACIANSSDVIISTGYNGMPVGCDDNVLPWGKSL 61
Query: 148 HDELD-----MCHAEMNAILNKNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIYMCDK 202
+ L+ +CHAE+NA LN ++++ C+LY +LFPCN CAK+II SGIKE+IY+ DK
Sbjct: 62 PNPLETKHPFVCHAELNAFLNASTSELSGCRLYVTLFPCNMCAKLIISSGIKEIIYLRDK 121
Query: 203 Q 203
Sbjct: 122 S 122
Score = 73.6 bits (179), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 34/66 (51%), Positives = 48/66 (72%), Gaps = 1/66 (1%)
Query: 1 MNAILNKNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIYMCDKHKQKPATIASKRMFD 60
+NA LN ++++ C+LY +LFPCN CAK+II SGIKE+IY+ DK K +AS++MFD
Sbjct: 77 LNAFLNASTSELSGCRLYVTLFPCNMCAKLIISSGIKEIIYLRDK-SNKWEMMASRKMFD 135
Query: 61 AAKVHY 66
+ V Y
Sbjct: 136 ESGVKY 141
>gi|218281132|ref|ZP_03487667.1| hypothetical protein EUBIFOR_00228 [Eubacterium biforme DSM 3989]
gi|218217646|gb|EEC91184.1| hypothetical protein EUBIFOR_00228 [Eubacterium biforme DSM 3989]
Length = 159
Score = 139 bits (350), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 71/121 (58%), Positives = 83/121 (68%), Gaps = 7/121 (5%)
Query: 87 DVLEWHEYFMASAFLVAKRSKDPVTRVGAVIVNEDNKIVGTGYNGMPIGCSDDEFPWDKN 146
DVL W +YFM A L A RSKDP TRVGA IVN ++VG GYNG P GC DDEFPW+++
Sbjct: 4 DVLSWDQYFMGMAHLSAMRSKDPNTRVGACIVNPQKRVVGLGYNGFPYGCEDDEFPWERD 63
Query: 147 THDELD-----MCHAEMNAILNKNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIYMCD 201
+ LD + HAE+NAILN + D C LY SLFPCNECAK IIQ+GI V+Y D
Sbjct: 64 G-EFLDTKYPYVVHAELNAILN-SIQDLHGCTLYVSLFPCNECAKAIIQAGITCVVYESD 121
Query: 202 K 202
K
Sbjct: 122 K 122
Score = 70.9 bits (172), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 37/64 (57%), Positives = 42/64 (65%), Gaps = 1/64 (1%)
Query: 1 MNAILNKNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIYMCDKHKQKPATIASKRMFD 60
+NAILN + D C LY SLFPCNECAK IIQ+GI V+Y DK+ IASKRMF
Sbjct: 79 LNAILN-SIQDLHGCTLYVSLFPCNECAKAIIQAGITCVVYESDKYDGTEGNIASKRMFH 137
Query: 61 AAKV 64
A V
Sbjct: 138 DAGV 141
>gi|331002521|ref|ZP_08326039.1| hypothetical protein HMPREF0491_00901 [Lachnospiraceae oral taxon
107 str. F0167]
gi|330410337|gb|EGG89771.1| hypothetical protein HMPREF0491_00901 [Lachnospiraceae oral taxon
107 str. F0167]
Length = 164
Score = 139 bits (349), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 67/130 (51%), Positives = 85/130 (65%), Gaps = 7/130 (5%)
Query: 83 KRVDDVLEWHEYFMASAFLVAKRSKDPVTRVGAVIVNEDNKIVGTGYNGMPIGCSDDEFP 142
++ +D + W EYF+ A L A+RSKDP T+VGA IV+EDNKI+ GYNG P GCSD++FP
Sbjct: 3 EKREDYINWDEYFIGVAKLSARRSKDPSTQVGACIVSEDNKILSMGYNGFPRGCSDEDFP 62
Query: 143 WDKNTH-------DELDMCHAEMNAILNKNSADTKRCKLYTSLFPCNECAKVIIQSGIKE 195
W K L H+E+NAILN + K+Y +LFPCNECAK IIQ+GIK
Sbjct: 63 WGKEYEITDPYNAKYLYSTHSELNAILNYRGGSLEGSKIYVTLFPCNECAKAIIQAGIKT 122
Query: 196 VIYMCDKQMS 205
+IY DK S
Sbjct: 123 IIYEDDKYAS 132
Score = 80.1 bits (196), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 36/67 (53%), Positives = 46/67 (68%)
Query: 1 MNAILNKNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIYMCDKHKQKPATIASKRMFD 60
+NAILN + K+Y +LFPCNECAK IIQ+GIK +IY DK+ P+ ASKRM +
Sbjct: 85 LNAILNYRGGSLEGSKIYVTLFPCNECAKAIIQAGIKTIIYEDDKYASSPSVRASKRMLN 144
Query: 61 AAKVHYW 67
AA V Y+
Sbjct: 145 AAGVRYY 151
>gi|335429374|ref|ZP_08556272.1| deoxycytidylate deaminase [Haloplasma contractile SSD-17B]
gi|334889384|gb|EGM27669.1| deoxycytidylate deaminase [Haloplasma contractile SSD-17B]
Length = 159
Score = 139 bits (349), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 68/122 (55%), Positives = 88/122 (72%), Gaps = 7/122 (5%)
Query: 86 DDVLEWHEYFMASAFLVAKRSKDPVTRVGAVIVNEDNKIVGTGYNGMPIGCSDDEFPWDK 145
+D + W +YFM A L A RSKD T+VGA IVN D +IVG GYNG+P+GC+D +FPW++
Sbjct: 3 EDYISWDDYFMGVAKLSALRSKDQNTQVGACIVNPDKRIVGIGYNGLPVGCNDRDFPWER 62
Query: 146 NTHDELD-----MCHAEMNAILNKNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIYMC 200
D LD + HAE NAILN ++ K C++Y +LFPCNEC K+IIQSGI+E+IYM
Sbjct: 63 KG-DFLDTKYPYVVHAEPNAILNSTTS-LKDCRIYVTLFPCNECTKLIIQSGIREIIYME 120
Query: 201 DK 202
DK
Sbjct: 121 DK 122
Score = 81.3 bits (199), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 37/65 (56%), Positives = 49/65 (75%), Gaps = 1/65 (1%)
Query: 2 NAILNKNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIYMCDKHKQKPATIASKRMFDA 61
NAILN ++ K C++Y +LFPCNEC K+IIQSGI+E+IYM DK+ +A+KRM D+
Sbjct: 80 NAILNSTTS-LKDCRIYVTLFPCNECTKLIIQSGIREIIYMEDKYNGSKENVAAKRMLDS 138
Query: 62 AKVHY 66
AKV Y
Sbjct: 139 AKVKY 143
>gi|237743385|ref|ZP_04573866.1| deoxycytidylate deaminase [Fusobacterium sp. 7_1]
gi|336401578|ref|ZP_08582340.1| hypothetical protein HMPREF0404_01631 [Fusobacterium sp. 21_1A]
gi|423137487|ref|ZP_17125130.1| hypothetical protein HMPREF9942_01268 [Fusobacterium nucleatum
subsp. animalis F0419]
gi|229433164|gb|EEO43376.1| deoxycytidylate deaminase [Fusobacterium sp. 7_1]
gi|336160679|gb|EGN63711.1| hypothetical protein HMPREF0404_01631 [Fusobacterium sp. 21_1A]
gi|371960134|gb|EHO77801.1| hypothetical protein HMPREF9942_01268 [Fusobacterium nucleatum
subsp. animalis F0419]
Length = 161
Score = 139 bits (349), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 67/122 (54%), Positives = 85/122 (69%), Gaps = 7/122 (5%)
Query: 86 DDVLEWHEYFMASAFLVAKRSKDPVTRVGAVIVNEDNKIVGTGYNGMPIGCSDDEFPWDK 145
++ + W YFM A L + RSKDP T+VGA IVNED +IVG GYNG+P GC D EFPW++
Sbjct: 3 ENYINWDSYFMGVAILSSMRSKDPNTQVGACIVNEDKRIVGVGYNGLPKGCDDKEFPWER 62
Query: 146 -----NTHDELDMCHAEMNAILNKNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIYMC 200
NT +CHAE+NAILN + K C +Y +LFPC+EC K IIQSGIKE++Y+
Sbjct: 63 DGEFLNTKYPY-VCHAELNAILNSIKS-LKNCTIYVALFPCHECTKAIIQSGIKEIVYLS 120
Query: 201 DK 202
DK
Sbjct: 121 DK 122
Score = 72.4 bits (176), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 34/66 (51%), Positives = 46/66 (69%), Gaps = 1/66 (1%)
Query: 1 MNAILNKNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIYMCDKHKQKPATIASKRMFD 60
+NAILN + K C +Y +LFPC+EC K IIQSGIKE++Y+ DK+ + ASK+M D
Sbjct: 79 LNAILNSIKS-LKNCTIYVALFPCHECTKAIIQSGIKEIVYLSDKYTDTDSNRASKKMLD 137
Query: 61 AAKVHY 66
+A V Y
Sbjct: 138 SAGVKY 143
>gi|330837260|ref|YP_004411901.1| dCMP deaminase [Sphaerochaeta coccoides DSM 17374]
gi|329749163|gb|AEC02519.1| dCMP deaminase [Sphaerochaeta coccoides DSM 17374]
Length = 161
Score = 139 bits (349), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 65/120 (54%), Positives = 83/120 (69%), Gaps = 5/120 (4%)
Query: 87 DVLEWHEYFMASAFLVAKRSKDPVTRVGAVIVNEDNKIVGTGYNGMPIGCSDDEFPWDKN 146
D + W EYFM A L A RSKDP T+VGA IV+ + +IVG GYNG P GC+DD+ PW++
Sbjct: 6 DYISWDEYFMGVALLSAMRSKDPSTQVGACIVSPEKRIVGVGYNGFPSGCNDDDLPWERE 65
Query: 147 TH----DELDMCHAEMNAILNKNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIYMCDK 202
+CHAE+NAILN +S + K LY +LFPCNECAK IIQ+GI E++Y+ DK
Sbjct: 66 GAFLETKYPFVCHAELNAILN-SSGNLKGSSLYVALFPCNECAKAIIQAGIVEIVYLSDK 124
Score = 74.7 bits (182), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 36/65 (55%), Positives = 46/65 (70%), Gaps = 1/65 (1%)
Query: 1 MNAILNKNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIYMCDKHKQKPATIASKRMFD 60
+NAILN +S + K LY +LFPCNECAK IIQ+GI E++Y+ DK+ A ASKRMF
Sbjct: 81 LNAILN-SSGNLKGSSLYVALFPCNECAKAIIQAGIVEIVYLSDKYADTDAVKASKRMFG 139
Query: 61 AAKVH 65
A+V
Sbjct: 140 QAQVR 144
>gi|257126237|ref|YP_003164351.1| zinc-binding CMP/dCMP deaminase [Leptotrichia buccalis C-1013-b]
gi|257050176|gb|ACV39360.1| CMP/dCMP deaminase zinc-binding [Leptotrichia buccalis C-1013-b]
Length = 161
Score = 139 bits (349), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 69/125 (55%), Positives = 85/125 (68%), Gaps = 7/125 (5%)
Query: 86 DDVLEWHEYFMASAFLVAKRSKDPVTRVGAVIVNEDNKIVGTGYNGMPIGCSDDEFPWDK 145
++ L W EYFM AFL RSKDP T+VGA I++ED KI+G GYNG P+G SDD PWDK
Sbjct: 5 ENYLSWDEYFMGIAFLSGMRSKDPSTQVGACIIDEDKKIIGIGYNGFPMGSSDDSMPWDK 64
Query: 146 NTHDELD-----MCHAEMNAILNKNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIYMC 200
+ + LD + HAE+NAILN + K +Y + FPCNECAK I+QSGIK+VIY
Sbjct: 65 DG-EFLDTKYPYVVHAELNAILNSIKS-LKNSTIYVTHFPCNECAKAIVQSGIKKVIYFS 122
Query: 201 DKQMS 205
DK S
Sbjct: 123 DKHKS 127
Score = 72.8 bits (177), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 36/64 (56%), Positives = 46/64 (71%), Gaps = 1/64 (1%)
Query: 1 MNAILNKNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIYMCDKHKQKPATIASKRMFD 60
+NAILN + K +Y + FPCNECAK I+QSGIK+VIY DKHK +T ASKR+F+
Sbjct: 81 LNAILNSIKS-LKNSTIYVTHFPCNECAKAIVQSGIKKVIYFSDKHKSLDSTKASKRIFE 139
Query: 61 AAKV 64
A+V
Sbjct: 140 NAQV 143
>gi|340754362|ref|ZP_08691118.1| deoxycytidylate deaminase [Fusobacterium sp. 2_1_31]
gi|422315410|ref|ZP_16396846.1| hypothetical protein FPOG_00490 [Fusobacterium periodonticum D10]
gi|229423878|gb|EEO38925.1| deoxycytidylate deaminase [Fusobacterium sp. 2_1_31]
gi|404592479|gb|EKA94303.1| hypothetical protein FPOG_00490 [Fusobacterium periodonticum D10]
Length = 160
Score = 139 bits (349), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 66/122 (54%), Positives = 88/122 (72%), Gaps = 7/122 (5%)
Query: 86 DDVLEWHEYFMASAFLVAKRSKDPVTRVGAVIVNEDNKIVGTGYNGMPIGCSDDEFPWDK 145
++ ++W YFM A L + RSKDP T+VGA IVNED +IVG GYNG+P GC D +FPW++
Sbjct: 3 ENYIDWDSYFMGIALLSSMRSKDPNTQVGACIVNEDKRIVGVGYNGLPKGCEDTDFPWER 62
Query: 146 NTHDELD-----MCHAEMNAILNKNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIYMC 200
+ L+ +CHAE+NAILN + K C +Y +LFPCNEC+K IIQSGIKE++Y+
Sbjct: 63 E-GEFLETKYPYVCHAELNAILNSIKS-LKDCVIYVALFPCNECSKAIIQSGIKEIVYLS 120
Query: 201 DK 202
DK
Sbjct: 121 DK 122
Score = 73.2 bits (178), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 35/66 (53%), Positives = 46/66 (69%), Gaps = 1/66 (1%)
Query: 1 MNAILNKNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIYMCDKHKQKPATIASKRMFD 60
+NAILN + K C +Y +LFPCNEC+K IIQSGIKE++Y+ DK+ ASK+M D
Sbjct: 79 LNAILNSIKS-LKDCVIYVALFPCNECSKAIIQSGIKEIVYLSDKYDGTDTNRASKKMLD 137
Query: 61 AAKVHY 66
+A V Y
Sbjct: 138 SAGVKY 143
>gi|225378688|ref|ZP_03755909.1| hypothetical protein ROSEINA2194_04358 [Roseburia inulinivorans DSM
16841]
gi|225209525|gb|EEG91879.1| hypothetical protein ROSEINA2194_04358 [Roseburia inulinivorans DSM
16841]
Length = 161
Score = 139 bits (349), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 64/120 (53%), Positives = 79/120 (65%), Gaps = 4/120 (3%)
Query: 87 DVLEWHEYFMASAFLVAKRSKDPVTRVGAVIVNEDNKIVGTGYNGMPIGCSDDEFPWDKN 146
D + W EYFM A L RSKDP T+VGA IV+ D+KI+ GYNG+P GCSDDEFPW +
Sbjct: 7 DYISWDEYFMGVAMLTGMRSKDPNTQVGACIVSADHKILSMGYNGLPTGCSDDEFPWGRE 66
Query: 147 T----HDELDMCHAEMNAILNKNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIYMCDK 202
+ L H+E+NAILN + +Y SLFPCNECAK IIQ+GIK ++Y DK
Sbjct: 67 GAPLENKYLFTTHSELNAILNYRGGSLEGSTIYVSLFPCNECAKAIIQAGIKRIVYDSDK 126
Score = 77.0 bits (188), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 34/64 (53%), Positives = 43/64 (67%)
Query: 1 MNAILNKNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIYMCDKHKQKPATIASKRMFD 60
+NAILN + +Y SLFPCNECAK IIQ+GIK ++Y DK+ P+ +ASKRM
Sbjct: 82 LNAILNYRGGSLEGSTIYVSLFPCNECAKAIIQAGIKRIVYDSDKYDGTPSVVASKRMLK 141
Query: 61 AAKV 64
AA V
Sbjct: 142 AAGV 145
>gi|224122016|ref|XP_002318729.1| predicted protein [Populus trichocarpa]
gi|222859402|gb|EEE96949.1| predicted protein [Populus trichocarpa]
Length = 225
Score = 138 bits (348), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 69/132 (52%), Positives = 89/132 (67%), Gaps = 8/132 (6%)
Query: 81 PHKRVDDVLEWHEYFMASAFLVAKRSKDPVTRVGAVIVNEDNKIVGTGYNGMPIGCSDDE 140
P KR + L W +YFMA A L A+RSKDP +VGA +V+++ I+G GYNG P GCSDD+
Sbjct: 60 PSKR-KEYLSWDDYFMAIALLSAERSKDPNRQVGACLVSKNGIILGIGYNGFPRGCSDDD 118
Query: 141 FPWDKNTH--DELD-----MCHAEMNAILNKNSADTKRCKLYTSLFPCNECAKVIIQSGI 193
PW K + D L+ +CHAE+NAILN N A +LY ++FPCNECAK+II SG+
Sbjct: 119 LPWAKKSKSGDPLETKYPYVCHAEVNAILNTNHASAVGQRLYVTMFPCNECAKIIILSGV 178
Query: 194 KEVIYMCDKQMS 205
EVIY +K S
Sbjct: 179 SEVIYFIEKNNS 190
Score = 67.4 bits (163), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 31/66 (46%), Positives = 43/66 (65%)
Query: 1 MNAILNKNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIYMCDKHKQKPATIASKRMFD 60
+NAILN N A +LY ++FPCNECAK+II SG+ EVIY +K+ A IAS ++
Sbjct: 143 VNAILNTNHASAVGQRLYVTMFPCNECAKIIILSGVSEVIYFIEKNNSDMAYIASHKLLS 202
Query: 61 AAKVHY 66
A + +
Sbjct: 203 MAGIKF 208
>gi|260495001|ref|ZP_05815130.1| ComE operon protein 2 [Fusobacterium sp. 3_1_33]
gi|336419871|ref|ZP_08600124.1| putative deoxycytidylate deaminase [Fusobacterium sp. 11_3_2]
gi|260197444|gb|EEW94962.1| ComE operon protein 2 [Fusobacterium sp. 3_1_33]
gi|336162708|gb|EGN65663.1| putative deoxycytidylate deaminase [Fusobacterium sp. 11_3_2]
Length = 161
Score = 138 bits (348), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 67/122 (54%), Positives = 85/122 (69%), Gaps = 7/122 (5%)
Query: 86 DDVLEWHEYFMASAFLVAKRSKDPVTRVGAVIVNEDNKIVGTGYNGMPIGCSDDEFPWDK 145
++ + W YFM A L + RSKDP T+VGA IVNED +IVG GYNG+P GC D EFPW++
Sbjct: 3 ENYINWDSYFMGIAILSSMRSKDPNTQVGACIVNEDKRIVGVGYNGLPKGCDDKEFPWER 62
Query: 146 -----NTHDELDMCHAEMNAILNKNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIYMC 200
NT +CHAE+NAILN + K C +Y +LFPC+EC K IIQSGIKE++Y+
Sbjct: 63 DGEFLNTKYPY-VCHAELNAILNSIKS-LKNCTIYVALFPCHECTKAIIQSGIKEIVYLS 120
Query: 201 DK 202
DK
Sbjct: 121 DK 122
Score = 72.4 bits (176), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 34/66 (51%), Positives = 46/66 (69%), Gaps = 1/66 (1%)
Query: 1 MNAILNKNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIYMCDKHKQKPATIASKRMFD 60
+NAILN + K C +Y +LFPC+EC K IIQSGIKE++Y+ DK+ + ASK+M D
Sbjct: 79 LNAILNSIKS-LKNCTIYVALFPCHECTKAIIQSGIKEIVYLSDKYTDTDSNRASKKMLD 137
Query: 61 AAKVHY 66
+A V Y
Sbjct: 138 SAGVKY 143
>gi|402311834|ref|ZP_10830765.1| cytidine and deoxycytidylate deaminase zinc-binding region
[Lachnospiraceae bacterium ICM7]
gi|404482922|ref|ZP_11018147.1| hypothetical protein HMPREF1135_01207 [Clostridiales bacterium
OBRC5-5]
gi|400370981|gb|EJP23960.1| cytidine and deoxycytidylate deaminase zinc-binding region
[Lachnospiraceae bacterium ICM7]
gi|404344012|gb|EJZ70371.1| hypothetical protein HMPREF1135_01207 [Clostridiales bacterium
OBRC5-5]
Length = 164
Score = 138 bits (348), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 67/130 (51%), Positives = 85/130 (65%), Gaps = 7/130 (5%)
Query: 83 KRVDDVLEWHEYFMASAFLVAKRSKDPVTRVGAVIVNEDNKIVGTGYNGMPIGCSDDEFP 142
++ +D + W EYF+ A L A+RSKDP T+VGA IV+EDNKI+ GYNG P GCSD++FP
Sbjct: 3 EKREDYINWDEYFIGVAKLSARRSKDPNTQVGACIVSEDNKILSMGYNGFPRGCSDEDFP 62
Query: 143 WDKNTH-------DELDMCHAEMNAILNKNSADTKRCKLYTSLFPCNECAKVIIQSGIKE 195
W K L H+E+NAILN + K+Y +LFPCNECAK IIQ+GIK
Sbjct: 63 WGKEFELTDPYNAKYLYSTHSELNAILNYRGGSLEGSKIYVTLFPCNECAKAIIQAGIKT 122
Query: 196 VIYMCDKQMS 205
+IY DK S
Sbjct: 123 IIYEEDKYAS 132
Score = 80.1 bits (196), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 36/67 (53%), Positives = 46/67 (68%)
Query: 1 MNAILNKNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIYMCDKHKQKPATIASKRMFD 60
+NAILN + K+Y +LFPCNECAK IIQ+GIK +IY DK+ P+ ASKRM +
Sbjct: 85 LNAILNYRGGSLEGSKIYVTLFPCNECAKAIIQAGIKTIIYEEDKYASSPSVRASKRMLN 144
Query: 61 AAKVHYW 67
AA V Y+
Sbjct: 145 AAGVRYY 151
>gi|376260850|ref|YP_005147570.1| deoxycytidylate deaminase [Clostridium sp. BNL1100]
gi|373944844|gb|AEY65765.1| deoxycytidylate deaminase [Clostridium sp. BNL1100]
Length = 161
Score = 138 bits (347), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 69/122 (56%), Positives = 83/122 (68%), Gaps = 7/122 (5%)
Query: 87 DVLEWHEYFMASAFLVAKRSKDPVTRVGAVIVN-EDNKIVGTGYNGMPIGCSDDEFPWDK 145
D + W EYFM A L KRSKDP T VG+ IV+ ++N+I+ GYNG P GCSDDEFPW++
Sbjct: 6 DYISWDEYFMGIAVLSGKRSKDPSTPVGSCIVDRKNNRILSVGYNGFPFGCSDDEFPWER 65
Query: 146 NTHDEL-----DMCHAEMNAILNKNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIYMC 200
D L + HAE+NAILN K+YT+LFPCNECAK IIQSGI EVIY+
Sbjct: 66 E-GDVLCTKYPYVVHAELNAILNNRGVSLDGSKIYTALFPCNECAKAIIQSGIMEVIYLS 124
Query: 201 DK 202
DK
Sbjct: 125 DK 126
Score = 76.6 bits (187), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 37/64 (57%), Positives = 43/64 (67%)
Query: 1 MNAILNKNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIYMCDKHKQKPATIASKRMFD 60
+NAILN K+YT+LFPCNECAK IIQSGI EVIY+ DK+ ASKRMF+
Sbjct: 82 LNAILNNRGVSLDGSKIYTALFPCNECAKAIIQSGIMEVIYLSDKYADTDNVKASKRMFE 141
Query: 61 AAKV 64
A V
Sbjct: 142 KAGV 145
>gi|348531156|ref|XP_003453076.1| PREDICTED: deoxycytidylate deaminase-like [Oreochromis niloticus]
Length = 173
Score = 138 bits (347), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 69/122 (56%), Positives = 94/122 (77%), Gaps = 8/122 (6%)
Query: 87 DVLEWHEYFMASAFLVAKRSKDPVTRVGAVIVNEDNKIVGTGYNGMPIGCSDDEFPWDKN 146
D+L +YFMA A L AKRSKDP T+VGA +V++DNKI+GTG+N MP G D + PW+++
Sbjct: 8 DLLIDADYFMAVAVLSAKRSKDPNTQVGACLVDQDNKIIGTGHNCMPNG-GDGKLPWNRD 66
Query: 147 THDELD-----MCHAEMNAILNKNS-ADTKRCKLYTSLFPCNECAKVIIQSGIKEVIYMC 200
D+LD +CHAE+NAI+N ++ AD K C +Y +LFPCNEC K+IIQ+G+KEV+Y+C
Sbjct: 67 -GDKLDTKYMYVCHAELNAIVNASAKADVKGCTMYVTLFPCNECTKLIIQAGLKEVVYLC 125
Query: 201 DK 202
DK
Sbjct: 126 DK 127
Score = 88.6 bits (218), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 39/67 (58%), Positives = 52/67 (77%), Gaps = 1/67 (1%)
Query: 1 MNAILNKNS-ADTKRCKLYTSLFPCNECAKVIIQSGIKEVIYMCDKHKQKPATIASKRMF 59
+NAI+N ++ AD K C +Y +LFPCNEC K+IIQ+G+KEV+Y+CDK+ P TIASKRM
Sbjct: 82 LNAIVNASAKADVKGCTMYVTLFPCNECTKLIIQAGLKEVVYLCDKYYDTPETIASKRML 141
Query: 60 DAAKVHY 66
D A + Y
Sbjct: 142 DMAGIPY 148
>gi|269123684|ref|YP_003306261.1| CMP/dCMP deaminase zinc-binding protein [Streptobacillus
moniliformis DSM 12112]
gi|268315010|gb|ACZ01384.1| CMP/dCMP deaminase zinc-binding protein [Streptobacillus
moniliformis DSM 12112]
Length = 159
Score = 138 bits (347), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 72/120 (60%), Positives = 85/120 (70%), Gaps = 8/120 (6%)
Query: 89 LEWHEYFMASAFLVAKRSKDPVTRVGAVIVNEDNKIVGTGYNGMPIGCSDDEFPWDKNTH 148
L W EYFM AFL A RSKDPVT+VGA IV +D+KIVG GYNG PIG SDDE PW+K+
Sbjct: 7 LSWDEYFMGIAFLSANRSKDPVTQVGACIV-KDSKIVGIGYNGFPIGSSDDEVPWEKDG- 64
Query: 149 DELD-----MCHAEMNAILNKNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIYMCDKQ 203
D L+ + HAE+NAILN N D K +Y + FPCNECAK IIQ+GI +VI+ DK
Sbjct: 65 DFLNTKYAYVVHAELNAILNSNR-DLKGSTIYVTHFPCNECAKSIIQTGISKVIFFSDKH 123
Score = 74.7 bits (182), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 36/65 (55%), Positives = 45/65 (69%), Gaps = 1/65 (1%)
Query: 1 MNAILNKNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIYMCDKHKQKPATIASKRMFD 60
+NAILN N D K +Y + FPCNECAK IIQ+GI +VI+ DKHK K ++IASKRM
Sbjct: 79 LNAILNSNR-DLKGSTIYVTHFPCNECAKSIIQTGISKVIFFSDKHKDKDSSIASKRMLS 137
Query: 61 AAKVH 65
A +
Sbjct: 138 NAGIE 142
>gi|262038435|ref|ZP_06011809.1| dCMP deaminase [Leptotrichia goodfellowii F0264]
gi|261747530|gb|EEY34995.1| dCMP deaminase [Leptotrichia goodfellowii F0264]
Length = 161
Score = 138 bits (347), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 70/125 (56%), Positives = 84/125 (67%), Gaps = 7/125 (5%)
Query: 86 DDVLEWHEYFMASAFLVAKRSKDPVTRVGAVIVNEDNKIVGTGYNGMPIGCSDDEFPWDK 145
DD L W EYFM AFL RSKDP T+VGA I++ED KI+G GYNG P+G SDD PW+K
Sbjct: 5 DDYLSWDEYFMGIAFLSGMRSKDPSTQVGACIIDEDKKIIGIGYNGFPMGSSDDNMPWNK 64
Query: 146 NTHDELD-----MCHAEMNAILNKNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIYMC 200
D L+ + HAE+NAILN + K +Y + FPCNECAK I+QSGIK+VIY
Sbjct: 65 EG-DFLNTKYPYVVHAELNAILNSIKS-LKNAIIYVTHFPCNECAKAIVQSGIKKVIYFS 122
Query: 201 DKQMS 205
DK S
Sbjct: 123 DKHKS 127
Score = 69.7 bits (169), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 35/64 (54%), Positives = 45/64 (70%), Gaps = 1/64 (1%)
Query: 1 MNAILNKNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIYMCDKHKQKPATIASKRMFD 60
+NAILN + K +Y + FPCNECAK I+QSGIK+VIY DKHK AT AS+++F+
Sbjct: 81 LNAILNSIKS-LKNAIIYVTHFPCNECAKAIVQSGIKKVIYFSDKHKSLDATKASRKIFE 139
Query: 61 AAKV 64
A V
Sbjct: 140 NAGV 143
>gi|294784089|ref|ZP_06749390.1| deoxycytidylate deaminase [Fusobacterium sp. 3_1_27]
gi|421145209|ref|ZP_15605098.1| deoxycytidylate deaminase [Fusobacterium nucleatum subsp. fusiforme
ATCC 51190]
gi|294488159|gb|EFG35504.1| deoxycytidylate deaminase [Fusobacterium sp. 3_1_27]
gi|395488381|gb|EJG09247.1| deoxycytidylate deaminase [Fusobacterium nucleatum subsp. fusiforme
ATCC 51190]
Length = 161
Score = 138 bits (347), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 67/122 (54%), Positives = 85/122 (69%), Gaps = 7/122 (5%)
Query: 86 DDVLEWHEYFMASAFLVAKRSKDPVTRVGAVIVNEDNKIVGTGYNGMPIGCSDDEFPWDK 145
++ + W YFM A L + RSKDP T+VGA IVNED +IVG GYNG+P GC D EFPW++
Sbjct: 3 ENYINWDSYFMGIAILSSMRSKDPNTQVGACIVNEDKRIVGVGYNGLPKGCDDKEFPWER 62
Query: 146 -----NTHDELDMCHAEMNAILNKNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIYMC 200
NT +CHAE+NAILN + K C +Y +LFPC+EC K IIQSGIKE++Y+
Sbjct: 63 DGEFLNTKYPY-VCHAELNAILNSIKS-LKDCTIYVALFPCHECTKAIIQSGIKEIVYLS 120
Query: 201 DK 202
DK
Sbjct: 121 DK 122
Score = 72.0 bits (175), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 34/66 (51%), Positives = 46/66 (69%), Gaps = 1/66 (1%)
Query: 1 MNAILNKNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIYMCDKHKQKPATIASKRMFD 60
+NAILN + K C +Y +LFPC+EC K IIQSGIKE++Y+ DK+ + ASK+M D
Sbjct: 79 LNAILNSIKS-LKDCTIYVALFPCHECTKAIIQSGIKEIVYLSDKYTDTDSNRASKKMLD 137
Query: 61 AAKVHY 66
+A V Y
Sbjct: 138 SAGVKY 143
>gi|240143386|ref|ZP_04741987.1| putative deoxycytidylate deaminase [Roseburia intestinalis L1-82]
gi|257204654|gb|EEV02939.1| putative deoxycytidylate deaminase [Roseburia intestinalis L1-82]
gi|291537131|emb|CBL10243.1| Deoxycytidylate deaminase [Roseburia intestinalis M50/1]
gi|291540369|emb|CBL13480.1| Deoxycytidylate deaminase [Roseburia intestinalis XB6B4]
Length = 161
Score = 138 bits (347), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 63/120 (52%), Positives = 79/120 (65%), Gaps = 4/120 (3%)
Query: 87 DVLEWHEYFMASAFLVAKRSKDPVTRVGAVIVNEDNKIVGTGYNGMPIGCSDDEFPWDKN 146
D + W EYFM A L RSKDP T+VGA IV+ED+KI+ GYNG P GCSDDEFPW++
Sbjct: 7 DYISWDEYFMGVAVLSGMRSKDPNTQVGACIVSEDHKILSMGYNGFPTGCSDDEFPWERE 66
Query: 147 ----THDELDMCHAEMNAILNKNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIYMCDK 202
+ H+E+NAILN + +Y +LFPCNECAK IIQSGI+ ++Y DK
Sbjct: 67 GEPLENKYFYTTHSELNAILNYRGGSLEGATIYVTLFPCNECAKAIIQSGIRRIVYDSDK 126
Score = 77.8 bits (190), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 33/64 (51%), Positives = 45/64 (70%)
Query: 1 MNAILNKNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIYMCDKHKQKPATIASKRMFD 60
+NAILN + +Y +LFPCNECAK IIQSGI+ ++Y DK++ PA +ASK+M +
Sbjct: 82 LNAILNYRGGSLEGATIYVTLFPCNECAKAIIQSGIRRIVYDSDKYETTPAVVASKKMLN 141
Query: 61 AAKV 64
AA V
Sbjct: 142 AAGV 145
>gi|34762517|ref|ZP_00143514.1| Deoxycytidylate deaminase [Fusobacterium nucleatum subsp. vincentii
ATCC 49256]
gi|237741327|ref|ZP_04571808.1| deoxycytidylate deaminase [Fusobacterium sp. 4_1_13]
gi|256846472|ref|ZP_05551929.1| ComE operon protein 2 [Fusobacterium sp. 3_1_36A2]
gi|27887795|gb|EAA24866.1| Deoxycytidylate deaminase [Fusobacterium nucleatum subsp. vincentii
ATCC 49256]
gi|229430859|gb|EEO41071.1| deoxycytidylate deaminase [Fusobacterium sp. 4_1_13]
gi|256718241|gb|EEU31797.1| ComE operon protein 2 [Fusobacterium sp. 3_1_36A2]
Length = 161
Score = 138 bits (347), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 67/122 (54%), Positives = 85/122 (69%), Gaps = 7/122 (5%)
Query: 86 DDVLEWHEYFMASAFLVAKRSKDPVTRVGAVIVNEDNKIVGTGYNGMPIGCSDDEFPWDK 145
++ + W YFM A L + RSKDP T+VGA IVNED +IVG GYNG+P GC D EFPW++
Sbjct: 3 ENYINWDSYFMGIAILSSMRSKDPNTQVGACIVNEDKRIVGVGYNGLPKGCDDKEFPWER 62
Query: 146 -----NTHDELDMCHAEMNAILNKNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIYMC 200
NT +CHAE+NAILN + K C +Y +LFPC+EC K IIQSGIKE++Y+
Sbjct: 63 DGEFLNTKYPY-VCHAELNAILNSIKS-LKDCTIYVALFPCHECTKAIIQSGIKEIVYLS 120
Query: 201 DK 202
DK
Sbjct: 121 DK 122
Score = 72.0 bits (175), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 34/66 (51%), Positives = 46/66 (69%), Gaps = 1/66 (1%)
Query: 1 MNAILNKNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIYMCDKHKQKPATIASKRMFD 60
+NAILN + K C +Y +LFPC+EC K IIQSGIKE++Y+ DK+ + ASK+M D
Sbjct: 79 LNAILNSIKS-LKDCTIYVALFPCHECTKAIIQSGIKEIVYLSDKYTDTDSNRASKKMLD 137
Query: 61 AAKVHY 66
+A V Y
Sbjct: 138 SAGVKY 143
>gi|374625136|ref|ZP_09697553.1| hypothetical protein HMPREF0978_00873 [Coprobacillus sp.
8_2_54BFAA]
gi|373916419|gb|EHQ48167.1| hypothetical protein HMPREF0978_00873 [Coprobacillus sp.
8_2_54BFAA]
Length = 154
Score = 138 bits (347), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 68/120 (56%), Positives = 83/120 (69%), Gaps = 6/120 (5%)
Query: 88 VLEWHEYFMASAFLVAKRSKDPVTRVGAVIVNEDNKIVGTGYNGMPIGCSDDEFPWDKNT 147
V+ W +YFM A L A RSKDP T+VGA IVNE NKIVG GYNG+P GC D+EFPW+
Sbjct: 4 VINWTQYFMGVAKLSAFRSKDPNTQVGACIVNEANKIVGVGYNGLPWGCEDNEFPWEVRE 63
Query: 148 HDELD-----MCHAEMNAILNKNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIYMCDK 202
D + + HAE+NAILN + K C++Y SLFPC+EC K IIQSGI E++Y DK
Sbjct: 64 GDLYETKYPYVVHAELNAILN-SIGQLKGCRIYVSLFPCHECVKAIIQSGISEIVYEDDK 122
Score = 73.6 bits (179), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 36/66 (54%), Positives = 46/66 (69%), Gaps = 1/66 (1%)
Query: 1 MNAILNKNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIYMCDKHKQKPATIASKRMFD 60
+NAILN + K C++Y SLFPC+EC K IIQSGI E++Y DK+K + A+KRM D
Sbjct: 79 LNAILN-SIGQLKGCRIYVSLFPCHECVKAIIQSGISEIVYEDDKYKGTDSDRAAKRMLD 137
Query: 61 AAKVHY 66
AA V Y
Sbjct: 138 AAGVKY 143
>gi|225028456|ref|ZP_03717648.1| hypothetical protein EUBHAL_02730 [Eubacterium hallii DSM 3353]
gi|224954206|gb|EEG35415.1| cytidine and deoxycytidylate deaminase zinc-binding region
[Eubacterium hallii DSM 3353]
Length = 159
Score = 138 bits (347), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 64/120 (53%), Positives = 80/120 (66%), Gaps = 4/120 (3%)
Query: 87 DVLEWHEYFMASAFLVAKRSKDPVTRVGAVIVNEDNKIVGTGYNGMPIGCSDDEFPWDKN 146
D + W YFM A L A+RSKD T+VG+ IVN NKI+ GYNGMP GC+DD PW++
Sbjct: 5 DYVSWDAYFMGVALLSAQRSKDNNTQVGSCIVNPHNKILSMGYNGMPTGCNDDRMPWERK 64
Query: 147 T----HDELDMCHAEMNAILNKNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIYMCDK 202
L +CHAE+NAILN + + ++YT+LFPCNEC K IIQ+GI EVIY DK
Sbjct: 65 GTPLDTKYLYVCHAELNAILNYSGGSLRGARIYTTLFPCNECTKAIIQAGITEVIYYSDK 124
Score = 78.6 bits (192), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 34/66 (51%), Positives = 45/66 (68%)
Query: 1 MNAILNKNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIYMCDKHKQKPATIASKRMFD 60
+NAILN + + ++YT+LFPCNEC K IIQ+GI EVIY DK+ +TIA+KRM D
Sbjct: 80 LNAILNYSGGSLRGARIYTTLFPCNECTKAIIQAGITEVIYYSDKYADTDSTIAAKRMLD 139
Query: 61 AAKVHY 66
+ Y
Sbjct: 140 MVGITY 145
>gi|335046942|ref|ZP_08539965.1| cytidine and deoxycytidylate deaminase zinc-binding region
[Oribacterium sp. oral taxon 108 str. F0425]
gi|363896809|ref|ZP_09323358.1| hypothetical protein HMPREF9624_02102 [Oribacterium sp. ACB7]
gi|333760728|gb|EGL38285.1| cytidine and deoxycytidylate deaminase zinc-binding region
[Oribacterium sp. oral taxon 108 str. F0425]
gi|361960374|gb|EHL13623.1| hypothetical protein HMPREF9624_02102 [Oribacterium sp. ACB7]
Length = 166
Score = 137 bits (346), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 70/130 (53%), Positives = 83/130 (63%), Gaps = 7/130 (5%)
Query: 80 SPHKRVDDVLEWHEYFMASAFLVAKRSKDPVTRVGAVIVNEDNKIVGTGYNGMPIGCSDD 139
S ++ D + W EYFM A L A RSKDP T+VGA IV+ DNKI+ GYNG P GCSDD
Sbjct: 2 SESEKRSDYISWDEYFMGIAELSALRSKDPSTQVGACIVSADNKILSMGYNGFPKGCSDD 61
Query: 140 EFPWDK--NTHDELD-----MCHAEMNAILNKNSADTKRCKLYTSLFPCNECAKVIIQSG 192
FPW K HD + + HAE+NAILN K+Y +LFPCNECAK IIQSG
Sbjct: 62 IFPWTKIRAEHDPYNAKYVYVTHAELNAILNYRGGSLDGAKIYVNLFPCNECAKAIIQSG 121
Query: 193 IKEVIYMCDK 202
IK ++Y DK
Sbjct: 122 IKTLVYREDK 131
Score = 80.9 bits (198), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 37/67 (55%), Positives = 45/67 (67%)
Query: 1 MNAILNKNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIYMCDKHKQKPATIASKRMFD 60
+NAILN K+Y +LFPCNECAK IIQSGIK ++Y DK+ P+ ASKRM D
Sbjct: 87 LNAILNYRGGSLDGAKIYVNLFPCNECAKAIIQSGIKTLVYREDKYADTPSVRASKRMLD 146
Query: 61 AAKVHYW 67
AA V Y+
Sbjct: 147 AAGVRYY 153
>gi|365128910|ref|ZP_09340756.1| hypothetical protein HMPREF1032_02520 [Subdoligranulum sp.
4_3_54A2FAA]
gi|363622137|gb|EHL73309.1| hypothetical protein HMPREF1032_02520 [Subdoligranulum sp.
4_3_54A2FAA]
Length = 161
Score = 137 bits (346), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 64/122 (52%), Positives = 83/122 (68%), Gaps = 6/122 (4%)
Query: 87 DVLEWHEYFMASAFLVAKRSKDPVTRVGAVIVNEDNKIVGTGYNGMPIGCSDDEFPWDKN 146
D + W EYFM A L A+RSKD ++VGA IV+ +NKI+ GYNGMP GC DD+ PW++
Sbjct: 5 DYISWDEYFMGVALLTAQRSKDNTSQVGACIVSRENKILSMGYNGMPTGCFDDDMPWERE 64
Query: 147 TH----DELDMCHAEMNAILN--KNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIYMC 200
+ +CHAE+NAILN + K ++YT+LFPCNECAK +IQSGI +VIY
Sbjct: 65 GEPLKTKYMYVCHAELNAILNHASGTGSLKGARIYTTLFPCNECAKALIQSGISQVIYYE 124
Query: 201 DK 202
DK
Sbjct: 125 DK 126
Score = 77.4 bits (189), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 38/79 (48%), Positives = 49/79 (62%), Gaps = 2/79 (2%)
Query: 1 MNAILN--KNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIYMCDKHKQKPATIASKRM 58
+NAILN + K ++YT+LFPCNECAK +IQSGI +VIY DK+ + IASKRM
Sbjct: 80 LNAILNHASGTGSLKGARIYTTLFPCNECAKALIQSGISQVIYYEDKYADSDSVIASKRM 139
Query: 59 FDAAKVHYWSEMDKMNGVQ 77
FD + Y GV+
Sbjct: 140 FDMVGIRYTPYKRTGRGVE 158
>gi|422940258|ref|ZP_16967599.1| deoxycytidylate deaminase [Fusobacterium nucleatum subsp. animalis
ATCC 51191]
gi|339890059|gb|EGQ79245.1| deoxycytidylate deaminase [Fusobacterium nucleatum subsp. animalis
ATCC 51191]
Length = 135
Score = 137 bits (346), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 67/122 (54%), Positives = 85/122 (69%), Gaps = 7/122 (5%)
Query: 86 DDVLEWHEYFMASAFLVAKRSKDPVTRVGAVIVNEDNKIVGTGYNGMPIGCSDDEFPWDK 145
++ + W YFM A L + RSKDP T+VGA IVNED +IVG GYNG+P GC D EFPW++
Sbjct: 3 ENYINWDSYFMGVAILSSMRSKDPNTQVGACIVNEDKRIVGVGYNGLPKGCDDKEFPWER 62
Query: 146 -----NTHDELDMCHAEMNAILNKNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIYMC 200
NT +CHAE+NAILN + K C +Y +LFPC+EC K IIQSGIKE++Y+
Sbjct: 63 DGEFLNTKYPY-VCHAELNAILNSIKS-LKDCTIYVALFPCHECTKAIIQSGIKEIVYLS 120
Query: 201 DK 202
DK
Sbjct: 121 DK 122
Score = 61.2 bits (147), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 29/57 (50%), Positives = 40/57 (70%), Gaps = 1/57 (1%)
Query: 1 MNAILNKNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIYMCDKHKQKPATIASKR 57
+NAILN + K C +Y +LFPC+EC K IIQSGIKE++Y+ DK+ + ASK+
Sbjct: 79 LNAILNSIKS-LKDCTIYVALFPCHECTKAIIQSGIKEIVYLSDKYTDTDSNRASKK 134
>gi|291460249|ref|ZP_06599639.1| putative deoxycytidylate deaminase [Oribacterium sp. oral taxon 078
str. F0262]
gi|291417196|gb|EFE90915.1| putative deoxycytidylate deaminase [Oribacterium sp. oral taxon 078
str. F0262]
Length = 166
Score = 137 bits (346), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 67/130 (51%), Positives = 84/130 (64%), Gaps = 7/130 (5%)
Query: 80 SPHKRVDDVLEWHEYFMASAFLVAKRSKDPVTRVGAVIVNEDNKIVGTGYNGMPIGCSDD 139
S + +D + W EYFM A + A+RSKDP T+VGA IV+ DNKI+ GYNG P GCSDD
Sbjct: 2 SESGKREDYISWEEYFMGVAEMSARRSKDPSTQVGACIVSRDNKILSMGYNGFPRGCSDD 61
Query: 140 EFPWDK-NTHDE------LDMCHAEMNAILNKNSADTKRCKLYTSLFPCNECAKVIIQSG 192
FPW K + D+ HAE+NAILN + KLY +LFPCNECAK +IQ+G
Sbjct: 62 LFPWTKIHVSDDPYNAKYFYSTHAELNAILNYRGGSLEGAKLYVTLFPCNECAKALIQAG 121
Query: 193 IKEVIYMCDK 202
IK ++Y DK
Sbjct: 122 IKTLVYREDK 131
Score = 79.3 bits (194), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 35/67 (52%), Positives = 45/67 (67%)
Query: 1 MNAILNKNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIYMCDKHKQKPATIASKRMFD 60
+NAILN + KLY +LFPCNECAK +IQ+GIK ++Y DK+ P AS+RM D
Sbjct: 87 LNAILNYRGGSLEGAKLYVTLFPCNECAKALIQAGIKTLVYREDKYADTPELRASRRMLD 146
Query: 61 AAKVHYW 67
AA V Y+
Sbjct: 147 AAGVRYY 153
>gi|363900268|ref|ZP_09326774.1| hypothetical protein HMPREF9625_01434 [Oribacterium sp. ACB1]
gi|395209757|ref|ZP_10398785.1| cytidine and deoxycytidylate deaminase zinc-binding region
[Oribacterium sp. ACB8]
gi|361957122|gb|EHL10434.1| hypothetical protein HMPREF9625_01434 [Oribacterium sp. ACB1]
gi|394704742|gb|EJF12274.1| cytidine and deoxycytidylate deaminase zinc-binding region
[Oribacterium sp. ACB8]
Length = 166
Score = 137 bits (346), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 67/130 (51%), Positives = 86/130 (66%), Gaps = 7/130 (5%)
Query: 80 SPHKRVDDVLEWHEYFMASAFLVAKRSKDPVTRVGAVIVNEDNKIVGTGYNGMPIGCSDD 139
S +++ D + W EYFM A L A+RSKDP T+VGA IV+ DNKI+ GYNG P GCSDD
Sbjct: 2 SENEKRSDYISWDEYFMGIAELSARRSKDPSTQVGACIVSSDNKILSMGYNGFPKGCSDD 61
Query: 140 EFPWDKNT--HDELD-----MCHAEMNAILNKNSADTKRCKLYTSLFPCNECAKVIIQSG 192
FPW + HD + + HAE+NAILN + K+Y +LFPCNECAK IIQ+G
Sbjct: 62 IFPWTRIEVDHDPYNAKYVYVTHAELNAILNYRGGSLEGAKIYVTLFPCNECAKAIIQAG 121
Query: 193 IKEVIYMCDK 202
IK +++ DK
Sbjct: 122 IKTLVFREDK 131
Score = 79.3 bits (194), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 35/67 (52%), Positives = 46/67 (68%)
Query: 1 MNAILNKNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIYMCDKHKQKPATIASKRMFD 60
+NAILN + K+Y +LFPCNECAK IIQ+GIK +++ DK+ P+ ASKRM D
Sbjct: 87 LNAILNYRGGSLEGAKIYVTLFPCNECAKAIIQAGIKTLVFREDKYADTPSVRASKRMLD 146
Query: 61 AAKVHYW 67
AA V Y+
Sbjct: 147 AAGVRYY 153
>gi|433450854|ref|ZP_20412710.1| deoxycytidylate deaminase [Mycoplasma sp. G5847]
gi|431933801|gb|ELK20360.1| deoxycytidylate deaminase [Mycoplasma sp. G5847]
Length = 160
Score = 137 bits (345), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 67/120 (55%), Positives = 81/120 (67%), Gaps = 6/120 (5%)
Query: 87 DVLEWHEYFMASAFLVAKRSKDPVTRVGAVIVNEDNKIVGTGYNGMPIGCSDDEFPWDKN 146
D L W YFM A A RSKDP T+VGA++VNE +IV TGYNG P G SDDEFPW K
Sbjct: 6 DYLSWQHYFMLIAKASAMRSKDPNTQVGAIVVNELQQIVATGYNGFPRGVSDDEFPWSKT 65
Query: 147 THDELD-----MCHAEMNAILNKNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIYMCD 201
+ + L+ + HAE+NAI++ S D C LY +LFPCNECAK+IIQ+GIK V Y D
Sbjct: 66 SKNWLENKYAYVAHAELNAIVSSRS-DLSNCDLYVTLFPCNECAKIIIQAGIKRVYYAND 124
Score = 72.0 bits (175), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 34/66 (51%), Positives = 44/66 (66%), Gaps = 1/66 (1%)
Query: 1 MNAILNKNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIYMCDKHKQKPATIASKRMFD 60
+NAI++ S D C LY +LFPCNECAK+IIQ+GIK V Y D + K IAS++M D
Sbjct: 82 LNAIVSSRS-DLSNCDLYVTLFPCNECAKIIIQAGIKRVYYANDPYHNKDEFIASRKMLD 140
Query: 61 AAKVHY 66
A + Y
Sbjct: 141 AVNIKY 146
>gi|289766417|ref|ZP_06525795.1| deoxycytidylate deaminase [Fusobacterium sp. D11]
gi|289717972|gb|EFD81984.1| deoxycytidylate deaminase [Fusobacterium sp. D11]
Length = 161
Score = 137 bits (345), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 67/122 (54%), Positives = 85/122 (69%), Gaps = 7/122 (5%)
Query: 86 DDVLEWHEYFMASAFLVAKRSKDPVTRVGAVIVNEDNKIVGTGYNGMPIGCSDDEFPWDK 145
++ + W YFM A L + RSKDP T+VGA IVNED +IVG GYNG+P GC D EFPW++
Sbjct: 3 ENYINWDSYFMGIAILSSMRSKDPNTQVGACIVNEDKRIVGVGYNGLPKGCDDKEFPWER 62
Query: 146 -----NTHDELDMCHAEMNAILNKNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIYMC 200
NT +CHAE+NAILN + K C +Y +LFPC+EC K IIQSGIKE++Y+
Sbjct: 63 DGEFLNTKYPY-VCHAELNAILNSIKS-LKDCIIYVALFPCHECTKAIIQSGIKEIVYLS 120
Query: 201 DK 202
DK
Sbjct: 121 DK 122
Score = 71.2 bits (173), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 34/66 (51%), Positives = 46/66 (69%), Gaps = 1/66 (1%)
Query: 1 MNAILNKNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIYMCDKHKQKPATIASKRMFD 60
+NAILN + K C +Y +LFPC+EC K IIQSGIKE++Y+ DK+ + ASK+M D
Sbjct: 79 LNAILNSIKS-LKDCIIYVALFPCHECTKAIIQSGIKEIVYLSDKYTDTDSNRASKKMLD 137
Query: 61 AAKVHY 66
+A V Y
Sbjct: 138 SAGVKY 143
>gi|145355155|ref|XP_001421833.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144582072|gb|ABP00127.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 125
Score = 137 bits (345), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 64/117 (54%), Positives = 83/117 (70%), Gaps = 7/117 (5%)
Query: 89 LEWHEYFMASAFLVAKRSKDPVTRVGAVIVNEDNKIVGTGYNGMPIGCSDDEFPWDKNT- 147
L W +YFM+ AFL A+RSKDP +VGA IV +D I+G GYNG P GC D+ PW K +
Sbjct: 5 LSWDDYFMSVAFLSAQRSKDPNKQVGACIVGKDKLILGVGYNGFPRGCPDNALPWSKKSA 64
Query: 148 -HDELD-----MCHAEMNAILNKNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIY 198
D L+ +CHAEMNAI+NKNSA L+ +++PCNECAK++IQ+GIKEV+Y
Sbjct: 65 NDDPLETKYAYVCHAEMNAIMNKNSASVAGGSLFVTMYPCNECAKLVIQAGIKEVVY 121
Score = 61.2 bits (147), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 25/41 (60%), Positives = 34/41 (82%)
Query: 1 MNAILNKNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIY 41
MNAI+NKNSA L+ +++PCNECAK++IQ+GIKEV+Y
Sbjct: 81 MNAIMNKNSASVAGGSLFVTMYPCNECAKLVIQAGIKEVVY 121
>gi|218135381|ref|ZP_03464185.1| hypothetical protein BACPEC_03286 [[Bacteroides] pectinophilus ATCC
43243]
gi|217990766|gb|EEC56777.1| hypothetical protein BACPEC_03286 [[Bacteroides] pectinophilus ATCC
43243]
Length = 161
Score = 137 bits (345), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 67/121 (55%), Positives = 81/121 (66%), Gaps = 6/121 (4%)
Query: 87 DVLEWHEYFMASAFLVAKRSKDPVTRVGAVIVNEDNKIVGTGYNGMPIGCSDDEFPWDKN 146
D + W EYFM A L RSKDP T+VGA IV++DNKI+ GYNG+P GCSDDEFPW +
Sbjct: 7 DYISWDEYFMGVAMLSGMRSKDPNTQVGACIVSKDNKILSMGYNGLPRGCSDDEFPWCRE 66
Query: 147 THDELD-----MCHAEMNAILNKNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIYMCD 201
D LD H+E+NAILN + K+Y +LFPCNECAK IIQ+GI V+Y D
Sbjct: 67 -GDPLDNKYIYTAHSELNAILNYRGGSLENAKIYVTLFPCNECAKAIIQAGITTVVYDDD 125
Query: 202 K 202
K
Sbjct: 126 K 126
Score = 81.3 bits (199), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 37/67 (55%), Positives = 46/67 (68%)
Query: 1 MNAILNKNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIYMCDKHKQKPATIASKRMFD 60
+NAILN + K+Y +LFPCNECAK IIQ+GI V+Y DK+ + IASKRMFD
Sbjct: 82 LNAILNYRGGSLENAKIYVTLFPCNECAKAIIQAGITTVVYDDDKYATSASVIASKRMFD 141
Query: 61 AAKVHYW 67
AA V Y+
Sbjct: 142 AAGVRYY 148
>gi|254303368|ref|ZP_04970726.1| dCMP deaminase [Fusobacterium nucleatum subsp. polymorphum ATCC
10953]
gi|422338780|ref|ZP_16419740.1| putative deoxycytidylate deaminase [Fusobacterium nucleatum subsp.
polymorphum F0401]
gi|148323560|gb|EDK88810.1| dCMP deaminase [Fusobacterium nucleatum subsp. polymorphum ATCC
10953]
gi|355371907|gb|EHG19250.1| putative deoxycytidylate deaminase [Fusobacterium nucleatum subsp.
polymorphum F0401]
Length = 161
Score = 137 bits (345), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 67/122 (54%), Positives = 85/122 (69%), Gaps = 7/122 (5%)
Query: 86 DDVLEWHEYFMASAFLVAKRSKDPVTRVGAVIVNEDNKIVGTGYNGMPIGCSDDEFPWDK 145
++ + W YFM A L + RSKDP T+VGA IVNED +IVG GYNG+P GC D EFPW++
Sbjct: 3 ENYINWDSYFMGIAILSSMRSKDPNTQVGACIVNEDKRIVGVGYNGLPKGCDDKEFPWER 62
Query: 146 -----NTHDELDMCHAEMNAILNKNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIYMC 200
NT +CHAE+NAILN + K C +Y +LFPC+EC K IIQSGIKE++Y+
Sbjct: 63 DGEFLNTKYPY-VCHAELNAILNSIKS-LKDCIIYVALFPCHECTKAIIQSGIKEIVYLS 120
Query: 201 DK 202
DK
Sbjct: 121 DK 122
Score = 72.4 bits (176), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 35/66 (53%), Positives = 46/66 (69%), Gaps = 1/66 (1%)
Query: 1 MNAILNKNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIYMCDKHKQKPATIASKRMFD 60
+NAILN + K C +Y +LFPC+EC K IIQSGIKE++Y+ DK+ + ASK+M D
Sbjct: 79 LNAILNSIKS-LKDCIIYVALFPCHECTKAIIQSGIKEIVYLSDKYTNTDSNRASKKMLD 137
Query: 61 AAKVHY 66
AA V Y
Sbjct: 138 AAGVKY 143
>gi|344205218|ref|YP_004790360.1| deoxycytidylate deaminase [Mycoplasma putrefaciens KS1]
gi|343957141|gb|AEM68856.1| deoxycytidylate deaminase [Mycoplasma putrefaciens KS1]
Length = 159
Score = 137 bits (344), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 66/119 (55%), Positives = 83/119 (69%), Gaps = 6/119 (5%)
Query: 89 LEWHEYFMASAFLVAKRSKDPVTRVGAVIVNEDNKIVGTGYNGMPIGCSDDEFPWDKNTH 148
L W +YFM A A RSKDP T+VGA++VN+ N+I+ TGYNG P G SDD+FPWD+
Sbjct: 8 LTWKQYFMLIAKASAMRSKDPSTQVGAIVVNKLNQIMSTGYNGFPRGVSDDQFPWDRQGK 67
Query: 149 DELDM-----CHAEMNAILNKNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIYMCDK 202
D +D+ HAE+NAI++ + T C LY SLFPCNEC K+IIQSGIK+V Y DK
Sbjct: 68 DWIDLKYAYVAHAEVNAIVSARTNLTD-CDLYVSLFPCNECTKIIIQSGIKKVYYAQDK 125
Score = 73.2 bits (178), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 35/66 (53%), Positives = 46/66 (69%), Gaps = 1/66 (1%)
Query: 1 MNAILNKNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIYMCDKHKQKPATIASKRMFD 60
+NAI++ + T C LY SLFPCNEC K+IIQSGIK+V Y DK+ +A++RM D
Sbjct: 82 VNAIVSARTNLTD-CDLYVSLFPCNECTKIIIQSGIKKVYYAQDKYHNSKEYVAARRMLD 140
Query: 61 AAKVHY 66
AAK+ Y
Sbjct: 141 AAKIEY 146
>gi|313665291|ref|YP_004047162.1| cytidine and deoxycytidylate deaminase zinc-binding region
[Mycoplasma leachii PG50]
gi|312949249|gb|ADR23845.1| cytidine and deoxycytidylate deaminase zinc-binding region
[Mycoplasma leachii PG50]
Length = 160
Score = 137 bits (344), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 66/120 (55%), Positives = 80/120 (66%), Gaps = 6/120 (5%)
Query: 87 DVLEWHEYFMASAFLVAKRSKDPVTRVGAVIVNEDNKIVGTGYNGMPIGCSDDEFPWDKN 146
D L W YFM A A RSKDP T+VGA++VNE +IV TGYNG P G SDD+FPW K
Sbjct: 6 DYLSWQHYFMLIAKASAMRSKDPNTQVGAIVVNELQQIVATGYNGFPRGVSDDDFPWSKT 65
Query: 147 THDELD-----MCHAEMNAILNKNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIYMCD 201
D L+ + HAE+NAI++ S D C LY +LFPCNECAK+IIQ+GIK + Y D
Sbjct: 66 NEDWLENKYAYVAHAELNAIVSSRS-DLSNCDLYVTLFPCNECAKIIIQAGIKRIYYAND 124
Score = 74.7 bits (182), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 35/66 (53%), Positives = 45/66 (68%), Gaps = 1/66 (1%)
Query: 1 MNAILNKNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIYMCDKHKQKPATIASKRMFD 60
+NAI++ S D C LY +LFPCNECAK+IIQ+GIK + Y D + QK IASK+M D
Sbjct: 82 LNAIVSSRS-DLSNCDLYVTLFPCNECAKIIIQAGIKRIYYANDPYHQKKEFIASKKMLD 140
Query: 61 AAKVHY 66
A + Y
Sbjct: 141 AVNIKY 146
>gi|326792204|ref|YP_004310025.1| dCMP deaminase [Clostridium lentocellum DSM 5427]
gi|326542968|gb|ADZ84827.1| dCMP deaminase [Clostridium lentocellum DSM 5427]
Length = 169
Score = 137 bits (344), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 67/128 (52%), Positives = 85/128 (66%), Gaps = 13/128 (10%)
Query: 87 DVLEWHEYFMASAFLVAKRSKDPVTRVGAVIVN-------EDNKIVGTGYNGMPIGCSDD 139
+ + W +YFM A L AKRSKDP T+VGA IV+ +N I+ GYNG+P+GCSDD
Sbjct: 5 EYISWDDYFMGIALLAAKRSKDPSTQVGACIVSGASHDSANENTILSVGYNGLPLGCSDD 64
Query: 140 EFPWDKNTHDELD-----MCHAEMNAILNKNSADTKRCKLYTSLFPCNECAKVIIQSGIK 194
EFPW+++ D LD + HAE+NAILN ++Y +LFPCNEC K IIQ GIK
Sbjct: 65 EFPWERD-GDFLDTKYPFVVHAELNAILNARGKSLVGARIYVALFPCNECCKAIIQCGIK 123
Query: 195 EVIYMCDK 202
EVIY+ DK
Sbjct: 124 EVIYLSDK 131
Score = 73.9 bits (180), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 35/64 (54%), Positives = 43/64 (67%)
Query: 1 MNAILNKNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIYMCDKHKQKPATIASKRMFD 60
+NAILN ++Y +LFPCNEC K IIQ GIKEVIY+ DK+ A ASK+MF+
Sbjct: 87 LNAILNARGKSLVGARIYVALFPCNECCKAIIQCGIKEVIYLSDKYADTDAVKASKKMFE 146
Query: 61 AAKV 64
AA V
Sbjct: 147 AAGV 150
>gi|260806557|ref|XP_002598150.1| hypothetical protein BRAFLDRAFT_82934 [Branchiostoma floridae]
gi|229283422|gb|EEN54162.1| hypothetical protein BRAFLDRAFT_82934 [Branchiostoma floridae]
Length = 200
Score = 137 bits (344), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 60/96 (62%), Positives = 75/96 (78%), Gaps = 5/96 (5%)
Query: 112 RVGAVIVNEDNKIVGTGYNGMPIGCSDDEFPWDKNTHDELD-----MCHAEMNAILNKNS 166
+VGA IVN + KIVG GYNGMP GCSDD+ PW + + LD +CHAE+NAILNKNS
Sbjct: 53 QVGACIVNSEKKIVGIGYNGMPNGCSDDKLPWSRTAENRLDTKYPYVCHAELNAILNKNS 112
Query: 167 ADTKRCKLYTSLFPCNECAKVIIQSGIKEVIYMCDK 202
AD K C +Y +LFPCNECAK++IQSGI+E+++M DK
Sbjct: 113 ADVKGCTMYVALFPCNECAKLVIQSGIREIVFMSDK 148
Score = 90.9 bits (224), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 38/66 (57%), Positives = 50/66 (75%)
Query: 1 MNAILNKNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIYMCDKHKQKPATIASKRMFD 60
+NAILNKNSAD K C +Y +LFPCNECAK++IQSGI+E+++M DK+ P AS+ + D
Sbjct: 104 LNAILNKNSADVKGCTMYVALFPCNECAKLVIQSGIREIVFMSDKYHHTPEMTASRTLLD 163
Query: 61 AAKVHY 66
A V Y
Sbjct: 164 LAGVKY 169
>gi|19705207|ref|NP_602702.1| deoxycytidylate deaminase [Fusobacterium nucleatum subsp. nucleatum
ATCC 25586]
gi|296329061|ref|ZP_06871566.1| deoxycytidylate deaminase [Fusobacterium nucleatum subsp. nucleatum
ATCC 23726]
gi|19713154|gb|AAL94001.1| Deoxycytidylate deaminase [Fusobacterium nucleatum subsp. nucleatum
ATCC 25586]
gi|296153780|gb|EFG94593.1| deoxycytidylate deaminase [Fusobacterium nucleatum subsp. nucleatum
ATCC 23726]
Length = 174
Score = 136 bits (343), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 67/122 (54%), Positives = 84/122 (68%), Gaps = 7/122 (5%)
Query: 86 DDVLEWHEYFMASAFLVAKRSKDPVTRVGAVIVNEDNKIVGTGYNGMPIGCSDDEFPWDK 145
++ + W YFM A L + RSKDP T+VGA IVNED +IVG GYNG+P GC D EFPW +
Sbjct: 16 ENYINWDSYFMGIAILSSMRSKDPNTQVGACIVNEDKRIVGVGYNGLPKGCDDKEFPWQR 75
Query: 146 -----NTHDELDMCHAEMNAILNKNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIYMC 200
NT +CHAE+NAILN + K C +Y +LFPC+EC K IIQSGIKE++Y+
Sbjct: 76 DGEFLNTKYPY-VCHAELNAILNSIKS-LKDCIIYVALFPCHECTKAIIQSGIKEIVYLS 133
Query: 201 DK 202
DK
Sbjct: 134 DK 135
Score = 71.6 bits (174), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 34/66 (51%), Positives = 46/66 (69%), Gaps = 1/66 (1%)
Query: 1 MNAILNKNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIYMCDKHKQKPATIASKRMFD 60
+NAILN + K C +Y +LFPC+EC K IIQSGIKE++Y+ DK+ + ASK+M D
Sbjct: 92 LNAILNSIKS-LKDCIIYVALFPCHECTKAIIQSGIKEIVYLSDKYTDTDSNRASKKMLD 150
Query: 61 AAKVHY 66
+A V Y
Sbjct: 151 SAGVKY 156
>gi|384108027|ref|ZP_10008924.1| Deoxycytidylate deaminase [Treponema sp. JC4]
gi|383870411|gb|EID86014.1| Deoxycytidylate deaminase [Treponema sp. JC4]
Length = 163
Score = 136 bits (343), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 66/117 (56%), Positives = 77/117 (65%), Gaps = 5/117 (4%)
Query: 87 DVLEWHEYFMASAFLVAKRSKDPVTRVGAVIVNEDNKIVGTGYNGMPIGCSDDEFPWDKN 146
D + W EYFM A L RSKDP T VGA IV+ DNKI+ GYNG P GCSDDEFPW +
Sbjct: 8 DYISWDEYFMGVAKLSGLRSKDPNTPVGACIVSSDNKILSMGYNGFPRGCSDDEFPWSRE 67
Query: 147 THDELD-----MCHAEMNAILNKNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIY 198
+ L+ + H+E+NAILN + K+Y SLFPCNECAK IIQ GIK VIY
Sbjct: 68 DENPLNTKYIYVTHSELNAILNYRGGSLEGAKIYVSLFPCNECAKAIIQCGIKTVIY 124
Score = 80.9 bits (198), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 39/66 (59%), Positives = 46/66 (69%)
Query: 1 MNAILNKNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIYMCDKHKQKPATIASKRMFD 60
+NAILN + K+Y SLFPCNECAK IIQ GIK VIY +K+ P+ IASK+MFD
Sbjct: 84 LNAILNYRGGSLEGAKIYVSLFPCNECAKAIIQCGIKTVIYDDNKYDGTPSVIASKKMFD 143
Query: 61 AAKVHY 66
AA V Y
Sbjct: 144 AAGVKY 149
>gi|269121089|ref|YP_003309266.1| CMP/dCMP deaminase zinc-binding protein [Sebaldella termitidis ATCC
33386]
gi|268614967|gb|ACZ09335.1| CMP/dCMP deaminase zinc-binding protein [Sebaldella termitidis ATCC
33386]
Length = 164
Score = 135 bits (340), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 67/123 (54%), Positives = 82/123 (66%), Gaps = 7/123 (5%)
Query: 86 DDVLEWHEYFMASAFLVAKRSKDPVTRVGAVIVNEDNKIVGTGYNGMPIGCSDDEFPWDK 145
+D + W+EYFM A L KRSKDP T+VGA I++ED KIVG GYNG P+G SDD PW K
Sbjct: 5 EDYISWNEYFMGLALLSGKRSKDPTTQVGACIIDEDKKIVGIGYNGFPLGSSDDNMPWGK 64
Query: 146 NTHDELD-----MCHAEMNAILNKNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIYMC 200
D L+ + HAE+NAILN + K C +Y + FPCNECAK I+QS I VIY+
Sbjct: 65 QG-DFLETKYPYVVHAELNAILNSIKS-LKGCTVYVTHFPCNECAKAIVQSKISRVIYLS 122
Query: 201 DKQ 203
DK
Sbjct: 123 DKH 125
Score = 66.6 bits (161), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 33/64 (51%), Positives = 43/64 (67%), Gaps = 1/64 (1%)
Query: 1 MNAILNKNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIYMCDKHKQKPATIASKRMFD 60
+NAILN + K C +Y + FPCNECAK I+QS I VIY+ DKHK K + ASKR+ +
Sbjct: 81 LNAILNSIKS-LKGCTVYVTHFPCNECAKAIVQSKISRVIYLSDKHKDKDSFKASKRILE 139
Query: 61 AAKV 64
A +
Sbjct: 140 NAGI 143
>gi|224541417|ref|ZP_03681956.1| hypothetical protein CATMIT_00579 [Catenibacterium mitsuokai DSM
15897]
gi|224525663|gb|EEF94768.1| cytidine and deoxycytidylate deaminase zinc-binding region
[Catenibacterium mitsuokai DSM 15897]
Length = 159
Score = 135 bits (340), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 65/120 (54%), Positives = 83/120 (69%), Gaps = 6/120 (5%)
Query: 88 VLEWHEYFMASAFLVAKRSKDPVTRVGAVIVNEDNKIVGTGYNGMPIGCSDDEFPWDKNT 147
++ W +YFM A L A RSKDP T+VGA IVN DN+IVG GYNG+P GC DD+FPW
Sbjct: 5 IITWDQYFMGVAKLSAYRSKDPNTQVGACIVNNDNRIVGVGYNGLPRGCEDDKFPWSVRE 64
Query: 148 HDELD-----MCHAEMNAILNKNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIYMCDK 202
D + HAE+NAILN ++ + C++Y SLFPC+EC K IIQSGIKE++Y +K
Sbjct: 65 GALYDTKYPYVVHAELNAILN-STQKLQDCRIYVSLFPCHECTKAIIQSGIKEIVYEDEK 123
Score = 71.2 bits (173), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 34/66 (51%), Positives = 47/66 (71%), Gaps = 1/66 (1%)
Query: 1 MNAILNKNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIYMCDKHKQKPATIASKRMFD 60
+NAILN ++ + C++Y SLFPC+EC K IIQSGIKE++Y +K+K + A+KRM D
Sbjct: 80 LNAILN-STQKLQDCRIYVSLFPCHECTKAIIQSGIKEIVYEDEKYKGSESDRAAKRMLD 138
Query: 61 AAKVHY 66
A V Y
Sbjct: 139 IAGVSY 144
>gi|421526059|ref|ZP_15972668.1| deoxycytidylate deaminase [Fusobacterium nucleatum ChDC F128]
gi|402257818|gb|EJU08291.1| deoxycytidylate deaminase [Fusobacterium nucleatum ChDC F128]
Length = 161
Score = 135 bits (340), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 66/122 (54%), Positives = 85/122 (69%), Gaps = 7/122 (5%)
Query: 86 DDVLEWHEYFMASAFLVAKRSKDPVTRVGAVIVNEDNKIVGTGYNGMPIGCSDDEFPWDK 145
++ + W YFM A L + RSKDP T+VGA IVNE+ +IVG GYNG+P GC D EFPW++
Sbjct: 3 ENYINWDSYFMGIAILSSMRSKDPNTQVGACIVNEEKRIVGVGYNGLPKGCDDKEFPWER 62
Query: 146 -----NTHDELDMCHAEMNAILNKNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIYMC 200
NT +CHAE+NAILN + K C +Y +LFPC+EC K IIQSGIKE++Y+
Sbjct: 63 DGEFLNTKYPY-VCHAELNAILNSIKS-LKDCIIYVALFPCHECTKAIIQSGIKEIVYLS 120
Query: 201 DK 202
DK
Sbjct: 121 DK 122
Score = 72.4 bits (176), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 35/66 (53%), Positives = 46/66 (69%), Gaps = 1/66 (1%)
Query: 1 MNAILNKNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIYMCDKHKQKPATIASKRMFD 60
+NAILN + K C +Y +LFPC+EC K IIQSGIKE++Y+ DK+ + ASK+M D
Sbjct: 79 LNAILNSIKS-LKDCIIYVALFPCHECTKAIIQSGIKEIVYLSDKYTNTDSNRASKKMLD 137
Query: 61 AAKVHY 66
AA V Y
Sbjct: 138 AAGVKY 143
>gi|169350182|ref|ZP_02867120.1| hypothetical protein CLOSPI_00926 [Clostridium spiroforme DSM 1552]
gi|169292965|gb|EDS75098.1| cytidine and deoxycytidylate deaminase zinc-binding region
[Clostridium spiroforme DSM 1552]
Length = 154
Score = 134 bits (338), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 66/120 (55%), Positives = 83/120 (69%), Gaps = 6/120 (5%)
Query: 88 VLEWHEYFMASAFLVAKRSKDPVTRVGAVIVNEDNKIVGTGYNGMPIGCSDDEFPWDKNT 147
V+ W +YFM A L A RSKDP T+VGA IV+ +NKIVG GYNG+P GC D EFPW+
Sbjct: 4 VINWTQYFMGVAKLSAFRSKDPNTQVGACIVSPENKIVGVGYNGLPWGCDDKEFPWEVRE 63
Query: 148 HDELD-----MCHAEMNAILNKNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIYMCDK 202
D D + HAE+NAILN + + K C++Y SLFPC+EC K IIQSGI E+++ DK
Sbjct: 64 GDLYDTKYPYVVHAELNAILN-SIGNLKGCRIYVSLFPCHECVKAIIQSGISEIVFEDDK 122
Score = 70.9 bits (172), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 34/66 (51%), Positives = 46/66 (69%), Gaps = 1/66 (1%)
Query: 1 MNAILNKNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIYMCDKHKQKPATIASKRMFD 60
+NAILN + + K C++Y SLFPC+EC K IIQSGI E+++ DK+ + A+KRM D
Sbjct: 79 LNAILN-SIGNLKGCRIYVSLFPCHECVKAIIQSGISEIVFEDDKYSGTDSDRAAKRMLD 137
Query: 61 AAKVHY 66
AA V Y
Sbjct: 138 AAGVKY 143
>gi|319937282|ref|ZP_08011689.1| deoxycytidylate deaminase [Coprobacillus sp. 29_1]
gi|319807648|gb|EFW04241.1| deoxycytidylate deaminase [Coprobacillus sp. 29_1]
Length = 154
Score = 134 bits (338), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 67/120 (55%), Positives = 81/120 (67%), Gaps = 6/120 (5%)
Query: 88 VLEWHEYFMASAFLVAKRSKDPVTRVGAVIVNEDNKIVGTGYNGMPIGCSDDEFPWDKNT 147
V+ W +YFM A L A RSKDP T+VGA IV ++KIVG GYNG+P GC DDEFPW
Sbjct: 4 VISWDQYFMGVAKLSAYRSKDPNTQVGACIVTPEHKIVGVGYNGLPWGCEDDEFPWANRE 63
Query: 148 HDELD-----MCHAEMNAILNKNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIYMCDK 202
D D + HAE+NAILN + C++Y SLFPC+EC K IIQSGIKE++Y DK
Sbjct: 64 GDMYDTKYPYVVHAELNAILN-SIQKLVGCRIYVSLFPCHECVKAIIQSGIKEIVYEDDK 122
Score = 73.9 bits (180), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 37/74 (50%), Positives = 52/74 (70%), Gaps = 2/74 (2%)
Query: 1 MNAILNKNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIYMCDKHKQKPATIASKRMFD 60
+NAILN + C++Y SLFPC+EC K IIQSGIKE++Y DK+ P+ A+KRM D
Sbjct: 79 LNAILN-SIQKLVGCRIYVSLFPCHECVKAIIQSGIKEIVYEDDKYSDTPSDKAAKRMLD 137
Query: 61 AAKVHYWSEMDKMN 74
AA V Y ++M++ +
Sbjct: 138 AAGVKY-TKMNRFD 150
>gi|198464653|ref|XP_001353310.2| GA19978 [Drosophila pseudoobscura pseudoobscura]
gi|198149816|gb|EAL30813.2| GA19978 [Drosophila pseudoobscura pseudoobscura]
Length = 159
Score = 134 bits (336), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 66/116 (56%), Positives = 82/116 (70%), Gaps = 9/116 (7%)
Query: 96 MASAFLVAKRSKDPVTRVGAVIVNEDNKIVGTGYNGMPIGCSDDEFPWDK----NTHDEL 151
MA++ L A+RSKDPVT+VGA IV++ +IV GYNG+P CSDDEFPW K ++ D L
Sbjct: 1 MATSLLSAQRSKDPVTQVGACIVDQQKRIVAIGYNGLPRNCSDDEFPWSKLSKNSSPDSL 60
Query: 152 D-----MCHAEMNAILNKNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIYMCDK 202
+ + HAE NAILN N LYT+LFPCNECAK+IIQSGI++V YM DK
Sbjct: 61 EEKKLYVVHAEANAILNSNGGSLVGTCLYTTLFPCNECAKLIIQSGIQKVFYMSDK 116
Score = 74.7 bits (182), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 36/63 (57%), Positives = 43/63 (68%)
Query: 2 NAILNKNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIYMCDKHKQKPATIASKRMFDA 61
NAILN N LYT+LFPCNECAK+IIQSGI++V YM DK+ K AS+RM D+
Sbjct: 73 NAILNSNGGSLVGTCLYTTLFPCNECAKLIIQSGIQKVFYMSDKYAHKKIYRASRRMLDS 132
Query: 62 AKV 64
V
Sbjct: 133 VGV 135
>gi|83319549|ref|YP_424377.1| deoxycytidylate deaminase [Mycoplasma capricolum subsp. capricolum
ATCC 27343]
gi|83283435|gb|ABC01367.1| probable deoxycytidylate deaminase [Mycoplasma capricolum subsp.
capricolum ATCC 27343]
Length = 153
Score = 134 bits (336), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 64/118 (54%), Positives = 79/118 (66%), Gaps = 6/118 (5%)
Query: 89 LEWHEYFMASAFLVAKRSKDPVTRVGAVIVNEDNKIVGTGYNGMPIGCSDDEFPWDKNTH 148
+ W YFM A A RSKDP T+VGA++VNE +IV TGYNG P G SDD+FPW K
Sbjct: 1 MSWQHYFMLIAKASAMRSKDPNTQVGAIVVNELQQIVATGYNGFPRGVSDDDFPWSKTNE 60
Query: 149 DELD-----MCHAEMNAILNKNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIYMCD 201
D L+ + HAE+NAI++ S D C LY +LFPCNECAK+IIQ+GIK + Y D
Sbjct: 61 DWLENKYAYVAHAELNAIVSSRS-DLSNCDLYVTLFPCNECAKIIIQAGIKRIYYAND 117
Score = 74.7 bits (182), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 35/66 (53%), Positives = 45/66 (68%), Gaps = 1/66 (1%)
Query: 1 MNAILNKNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIYMCDKHKQKPATIASKRMFD 60
+NAI++ S D C LY +LFPCNECAK+IIQ+GIK + Y D + QK IASK+M D
Sbjct: 75 LNAIVSSRS-DLSNCDLYVTLFPCNECAKIIIQAGIKRIYYANDPYHQKKEFIASKKMLD 133
Query: 61 AAKVHY 66
A + Y
Sbjct: 134 AVNIKY 139
>gi|195160343|ref|XP_002021035.1| GL25124 [Drosophila persimilis]
gi|194118148|gb|EDW40191.1| GL25124 [Drosophila persimilis]
Length = 159
Score = 133 bits (335), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 66/116 (56%), Positives = 82/116 (70%), Gaps = 9/116 (7%)
Query: 96 MASAFLVAKRSKDPVTRVGAVIVNEDNKIVGTGYNGMPIGCSDDEFPWDK----NTHDEL 151
MA++ L A+RSKDPVT+VGA IV++ +IV GYNG+P CSDDEFPW K ++ D L
Sbjct: 1 MATSLLSAQRSKDPVTQVGACIVDQQKRIVAIGYNGLPRNCSDDEFPWSKLSKNSSPDSL 60
Query: 152 D-----MCHAEMNAILNKNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIYMCDK 202
+ + HAE NAILN N LYT+LFPCNECAK+IIQSGI++V YM DK
Sbjct: 61 EEKKLYVVHAEANAILNSNGGSLVGTCLYTTLFPCNECAKLIIQSGIQKVFYMSDK 116
Score = 73.6 bits (179), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 36/63 (57%), Positives = 42/63 (66%)
Query: 2 NAILNKNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIYMCDKHKQKPATIASKRMFDA 61
NAILN N LYT+LFPCNECAK+IIQSGI++V YM DK+ K AS+RM D
Sbjct: 73 NAILNSNGGSLVGTCLYTTLFPCNECAKLIIQSGIQKVFYMSDKYAHKQIYRASRRMLDC 132
Query: 62 AKV 64
V
Sbjct: 133 VGV 135
>gi|91088933|ref|XP_973477.1| PREDICTED: similar to dCMP deaminase [Tribolium castaneum]
gi|270011568|gb|EFA08016.1| hypothetical protein TcasGA2_TC005605 [Tribolium castaneum]
Length = 318
Score = 133 bits (334), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 73/195 (37%), Positives = 113/195 (57%), Gaps = 16/195 (8%)
Query: 13 KRCKLYTSLFPCNECAKVIIQSGIKEVIYMCDKHKQKPATIASKRMFDAAKVHYWSEMDK 72
++C LYT+ FPCNE AK+IIQ+GIK+++Y+ D+HK+ ++ M + + E +K
Sbjct: 97 EKCTLYTTHFPCNESAKLIIQTGIKKIVYLNDEHKELRKFTVAREMLNTVGI----ECEK 152
Query: 73 MNGVQNGSPHKRVDDVLEWHEYFMASAFLVAKRSKDPVTRVGAVIVNEDNKIVGTGYNGM 132
+ D ++ +E MA V++ SKDP +VGA +VN + +G G+N M
Sbjct: 153 FSSS---------DKIVLKNEIIMAFCEKVSRNSKDPKKKVGACVVNAQGQAIGWGFNDM 203
Query: 133 PIGCSDDEFPWDKNTHDELDMCHAEMNAILNKNSADTKRCKLYTSLFPCNECAKVIIQSG 192
P D W+ L +CHAE+NAI+N + K KLY + FPCN CA++I+ +G
Sbjct: 204 PQSHEDFNKYWENREEKLLRVCHAELNAIVN-SKGSLKNAKLYCTWFPCNICAQLIVNTG 262
Query: 193 IKEVIYMCDKQMSYK 207
IKEV Y D+++ K
Sbjct: 263 IKEVFY--DQELGPK 275
Score = 80.1 bits (196), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 47/117 (40%), Positives = 69/117 (58%), Gaps = 6/117 (5%)
Query: 93 EYFMASAFLVAKRSKDPVTRVGAVIVNEDNKIVGTGYNGMPIGCSDDEFPWDKNTHDE-- 150
E M +A++SKDP +VGA +VN + I+G+ +N P G P KN E
Sbjct: 14 EAIMEHCLSLARKSKDPKIQVGACVVNTQDMIIGSAFNSPPNGWPGGSLPSTKNLPSEHF 73
Query: 151 --LDMCHAEMNAILNKNSADT--KRCKLYTSLFPCNECAKVIIQSGIKEVIYMCDKQ 203
L +C E AI N +A+ ++C LYT+ FPCNE AK+IIQ+GIK+++Y+ D+
Sbjct: 74 YGLYVCPTEQIAIANAMAANATLEKCTLYTTHFPCNESAKLIIQTGIKKIVYLNDEH 130
>gi|340371773|ref|XP_003384419.1| PREDICTED: deoxycytidylate deaminase-like [Amphimedon
queenslandica]
Length = 176
Score = 133 bits (334), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 61/115 (53%), Positives = 79/115 (68%), Gaps = 6/115 (5%)
Query: 94 YFMASAFLVAKRSKDPVTRVGAVIVNEDNKIVGTGYNGMPIGCSDDEFPWDKNTHDELD- 152
+FM+ AFL + RSKDPVT+VGA +V +D ++ TGYNGMP GCSDD PWD +E +
Sbjct: 17 FFMSLAFLTSDRSKDPVTQVGACVV-KDGILISTGYNGMPWGCSDDILPWDGTAKNEEEN 75
Query: 153 ----MCHAEMNAILNKNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIYMCDKQ 203
+CHAE NA +N+ D C LYT LFPC +CAK+I+Q+GI V+YM DK
Sbjct: 76 KRPYVCHAEFNAFVNRGDKDLSGCTLYTGLFPCKDCAKLIVQTGITTVVYMSDKH 130
Score = 70.9 bits (172), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 30/65 (46%), Positives = 42/65 (64%)
Query: 1 MNAILNKNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIYMCDKHKQKPATIASKRMFD 60
NA +N+ D C LYT LFPC +CAK+I+Q+GI V+YM DKHK+K I ++ + +
Sbjct: 85 FNAFVNRGDKDLSGCTLYTGLFPCKDCAKLIVQTGITTVVYMSDKHKEKKKYIIARDILE 144
Query: 61 AAKVH 65
A V
Sbjct: 145 KANVE 149
>gi|347533490|ref|YP_004840253.1| dCMP deaminase [Roseburia hominis A2-183]
gi|345503638|gb|AEN98321.1| dCMP deaminase [Roseburia hominis A2-183]
Length = 161
Score = 132 bits (333), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 61/120 (50%), Positives = 78/120 (65%), Gaps = 4/120 (3%)
Query: 87 DVLEWHEYFMASAFLVAKRSKDPVTRVGAVIVNEDNKIVGTGYNGMPIGCSDDEFPWDKN 146
D + W EYFM A L RSKDP T+VGA IV+E++KI+ GYNG P GCSDD+FPW +
Sbjct: 7 DYISWDEYFMGVATLSGMRSKDPNTQVGACIVSEEHKILSMGYNGFPTGCSDDDFPWARE 66
Query: 147 T----HDELDMCHAEMNAILNKNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIYMCDK 202
+ H+E+NAILN + +Y +LFPCNECAK IIQ+GIK ++Y DK
Sbjct: 67 GEPLENKYFYTTHSELNAILNYRGGSLEGATMYVTLFPCNECAKAIIQAGIKRLVYDSDK 126
Score = 76.6 bits (187), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 33/64 (51%), Positives = 44/64 (68%)
Query: 1 MNAILNKNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIYMCDKHKQKPATIASKRMFD 60
+NAILN + +Y +LFPCNECAK IIQ+GIK ++Y DK+ P+TIAS++M
Sbjct: 82 LNAILNYRGGSLEGATMYVTLFPCNECAKAIIQAGIKRLVYDSDKYNGTPSTIASRKMLS 141
Query: 61 AAKV 64
AA V
Sbjct: 142 AAGV 145
>gi|320528437|ref|ZP_08029599.1| cytidine and deoxycytidylate deaminase zinc-binding region
[Solobacterium moorei F0204]
gi|320131351|gb|EFW23919.1| cytidine and deoxycytidylate deaminase zinc-binding region
[Solobacterium moorei F0204]
Length = 164
Score = 132 bits (333), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 65/122 (53%), Positives = 84/122 (68%), Gaps = 7/122 (5%)
Query: 86 DDVLEWHEYFMASAFLVAKRSKDPVTRVGAVIVNEDNKIVGTGYNGMPIGCSDDEFPWDK 145
+++L W EYFM A L A RSKDP T+VGA IV++++++V GYNG P GCSD+ FPW +
Sbjct: 5 ENILSWDEYFMGLAHLSALRSKDPNTKVGAAIVDDNHRVVSVGYNGFPKGCSDEVFPWGR 64
Query: 146 NTHDELD-----MCHAEMNAILNKNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIYMC 200
+ D LD + HAE+NAILN + C +Y SLFPCNECAK IIQSGI ++Y
Sbjct: 65 DG-DTLDSKYAFVVHAELNAILN-SKWPVVGCTIYVSLFPCNECAKAIIQSGIHRIVYES 122
Query: 201 DK 202
DK
Sbjct: 123 DK 124
Score = 68.6 bits (166), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 35/64 (54%), Positives = 41/64 (64%), Gaps = 1/64 (1%)
Query: 1 MNAILNKNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIYMCDKHKQKPATIASKRMFD 60
+NAILN + C +Y SLFPCNECAK IIQSGI ++Y DK+ IASKRM
Sbjct: 81 LNAILN-SKWPVVGCTIYVSLFPCNECAKAIIQSGIHRIVYESDKYNGVDTNIASKRMLK 139
Query: 61 AAKV 64
AA V
Sbjct: 140 AAGV 143
>gi|153812522|ref|ZP_01965190.1| hypothetical protein RUMOBE_02921 [Ruminococcus obeum ATCC 29174]
gi|149831447|gb|EDM86535.1| cytidine and deoxycytidylate deaminase zinc-binding region
[Ruminococcus obeum ATCC 29174]
Length = 146
Score = 130 bits (328), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 65/112 (58%), Positives = 76/112 (67%), Gaps = 6/112 (5%)
Query: 96 MASAFLVAKRSKDPVTRVGAVIVNEDNKIVGTGYNGMPIGCSDDEFPWDKNTHDELD--- 152
M A L RSKDP ++VGA IV+ DNKI+ GYNG P GCSDDEFPW + D LD
Sbjct: 1 MGVAMLSGMRSKDPNSQVGACIVSNDNKILSMGYNGFPKGCSDDEFPWAREG-DPLDTKY 59
Query: 153 --MCHAEMNAILNKNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIYMCDK 202
+ H+E+NAILN + KLY SLFPCNECAK IIQ+GIK V+Y CDK
Sbjct: 60 LYVTHSELNAILNYRGGSLEGAKLYVSLFPCNECAKAIIQAGIKTVVYDCDK 111
Score = 91.7 bits (226), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 41/67 (61%), Positives = 49/67 (73%)
Query: 1 MNAILNKNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIYMCDKHKQKPATIASKRMFD 60
+NAILN + KLY SLFPCNECAK IIQ+GIK V+Y CDK++ P+ IASKRM D
Sbjct: 67 LNAILNYRGGSLEGAKLYVSLFPCNECAKAIIQAGIKTVVYDCDKYEHTPSVIASKRMLD 126
Query: 61 AAKVHYW 67
AA V Y+
Sbjct: 127 AAGVRYY 133
>gi|357477061|ref|XP_003608816.1| Deoxycytidylate deaminase [Medicago truncatula]
gi|355509871|gb|AES91013.1| Deoxycytidylate deaminase [Medicago truncatula]
Length = 185
Score = 130 bits (328), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 65/119 (54%), Positives = 82/119 (68%), Gaps = 8/119 (6%)
Query: 81 PHKRVDDVLEWHEYFMASAFLVAKRSKDPVTRVGAVIVNEDNKIVGTGYNGMPIGCSDDE 140
P KR L W +YFMA AFL A+RSKDP +VGA +V++D+ I+G GYNG P GCSDD+
Sbjct: 65 PTKR-KGYLSWDDYFMAIAFLSAERSKDPNRQVGACLVSQDDIILGIGYNGFPRGCSDDK 123
Query: 141 FPWDK--NTHDELD-----MCHAEMNAILNKNSADTKRCKLYTSLFPCNECAKVIIQSG 192
PW K T + L+ +CHAE+NAILN N A +LY ++FPCNECAK+IIQ G
Sbjct: 124 LPWAKKSRTGNPLETKYPYVCHAEVNAILNTNHASAAGQRLYVTMFPCNECAKIIIQVG 182
Score = 49.7 bits (117), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 21/35 (60%), Positives = 26/35 (74%)
Query: 1 MNAILNKNSADTKRCKLYTSLFPCNECAKVIIQSG 35
+NAILN N A +LY ++FPCNECAK+IIQ G
Sbjct: 148 VNAILNTNHASAAGQRLYVTMFPCNECAKIIIQVG 182
>gi|223944391|gb|ACN26279.1| unknown [Zea mays]
gi|413952321|gb|AFW84970.1| hypothetical protein ZEAMMB73_364855 [Zea mays]
gi|413952322|gb|AFW84971.1| hypothetical protein ZEAMMB73_364855 [Zea mays]
Length = 154
Score = 130 bits (327), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 63/116 (54%), Positives = 82/116 (70%), Gaps = 7/116 (6%)
Query: 96 MASAFLVAKRSKDPVTRVGAVIVNEDNKIVGTGYNGMPIGCSDDEFPWDKNT--HDELD- 152
MA AFL A+RSKDP +VGA +V+++ I+G GYNG P GCSDD+ PW K + D L+
Sbjct: 1 MAIAFLSAERSKDPNRQVGACLVSQEGIILGIGYNGFPRGCSDDKLPWAKKSASGDPLET 60
Query: 153 ----MCHAEMNAILNKNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIYMCDKQM 204
+ HAE+NAILN N A KLY ++FPCNECAK+IIQSG+ EVIY +K++
Sbjct: 61 KFPYVVHAEVNAILNTNHASAAGQKLYVTMFPCNECAKIIIQSGVSEVIYFVEKKI 116
Score = 65.9 bits (159), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 34/75 (45%), Positives = 44/75 (58%), Gaps = 2/75 (2%)
Query: 1 MNAILNKNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIYMCDKHKQKPA--TIASKRM 58
+NAILN N A KLY ++FPCNECAK+IIQSG+ EVIY +K A +AS ++
Sbjct: 70 VNAILNTNHASAAGQKLYVTMFPCNECAKIIIQSGVSEVIYFVEKKIDNSAHVYVASHKL 129
Query: 59 FDAAKVHYWSEMDKM 73
A V +M
Sbjct: 130 LSMAGVKVRKHQPQM 144
>gi|73852493|ref|YP_293777.1| putative deoxycytidylate deaminase [Emiliania huxleyi virus 86]
gi|72415209|emb|CAI65446.1| putative deoxycytidylate deaminase [Emiliania huxleyi virus 86]
Length = 173
Score = 130 bits (327), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 63/123 (51%), Positives = 82/123 (66%), Gaps = 8/123 (6%)
Query: 87 DVLEWHEYFMASAFLVAKRSKDPVTRVGAVIV-NEDNKIVGTGYNGMPIGCSDDEFPWDK 145
D + W +YFM A L A RSKDP T+VG+ I+ ++ NKI+ GYNGMP GC+DD+FPW K
Sbjct: 16 DYISWDQYFMGVAKLSAMRSKDPSTQVGSCIIESKTNKIISIGYNGMPRGCNDDDFPWGK 75
Query: 146 NTHDE--LD-----MCHAEMNAILNKNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIY 198
+ LD + H+E NAILN N C +Y +LFPCNEC K+IIQSGI E++Y
Sbjct: 76 KEKNSNILDTKYPFVVHSEANAILNANGTSVNGCTMYVTLFPCNECTKLIIQSGICEIVY 135
Query: 199 MCD 201
+ D
Sbjct: 136 LDD 138
Score = 65.5 bits (158), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 31/63 (49%), Positives = 39/63 (61%), Gaps = 1/63 (1%)
Query: 2 NAILNKNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIYMCDKHKQKPATIASKRMFDA 61
NAILN N C +Y +LFPCNEC K+IIQSGI E++Y+ D + AS RM +
Sbjct: 96 NAILNANGTSVNGCTMYVTLFPCNECTKLIIQSGICEIVYL-DDYNDITTKTASLRMLQS 154
Query: 62 AKV 64
A V
Sbjct: 155 AGV 157
>gi|227873068|ref|ZP_03991362.1| dCMP deaminase [Oribacterium sinus F0268]
gi|227841049|gb|EEJ51385.1| dCMP deaminase [Oribacterium sinus F0268]
Length = 173
Score = 130 bits (326), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 64/129 (49%), Positives = 80/129 (62%), Gaps = 7/129 (5%)
Query: 80 SPHKRVDDVLEWHEYFMASAFLVAKRSKDPVTRVGAVIVNEDNKIVGTGYNGMPIGCSDD 139
S + + D + W EYFM L A RSKDP T+VGA IV+ D+KI+ GYNG P GCSDD
Sbjct: 9 SENDKRQDAISWDEYFMGICTLSAHRSKDPSTQVGACIVSPDHKILSMGYNGFPKGCSDD 68
Query: 140 EFPWDKNTHDE-------LDMCHAEMNAILNKNSADTKRCKLYTSLFPCNECAKVIIQSG 192
FPW K ++ + HAE+NAILN + +Y +LFPCNECAK IIQSG
Sbjct: 69 IFPWAKMKAEQDPYNAKYFYVTHAELNAILNYRGGSLEGATIYVTLFPCNECAKAIIQSG 128
Query: 193 IKEVIYMCD 201
IK ++Y D
Sbjct: 129 IKTLVYWED 137
Score = 77.8 bits (190), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 36/67 (53%), Positives = 44/67 (65%)
Query: 1 MNAILNKNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIYMCDKHKQKPATIASKRMFD 60
+NAILN + +Y +LFPCNECAK IIQSGIK ++Y D + PA ASKRM D
Sbjct: 94 LNAILNYRGGSLEGATIYVTLFPCNECAKAIIQSGIKTLVYWEDIYADTPAVKASKRMLD 153
Query: 61 AAKVHYW 67
AA V Y+
Sbjct: 154 AAGVRYY 160
>gi|283769499|ref|ZP_06342395.1| cytidine and deoxycytidylate deaminase zinc-binding region
[Bulleidia extructa W1219]
gi|283103767|gb|EFC05153.1| cytidine and deoxycytidylate deaminase zinc-binding region
[Bulleidia extructa W1219]
Length = 157
Score = 129 bits (324), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 63/120 (52%), Positives = 82/120 (68%), Gaps = 7/120 (5%)
Query: 88 VLEWHEYFMASAFLVAKRSKDPVTRVGAVIVNEDNKIVGTGYNGMPIGCSDDEFPWDKNT 147
+L W YFM A L A RSKDP T+VGA IV+E++++V GYNG+P GC D ++PW +
Sbjct: 2 ILPWDSYFMGLAHLSALRSKDPNTQVGAAIVDENHRVVSVGYNGLPRGCEDSDYPWSREG 61
Query: 148 HDELD-----MCHAEMNAILNKNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIYMCDK 202
+ L+ + HAE+NAILN + K C +Y SLFPCNECAK IIQSGI+ V+Y DK
Sbjct: 62 -NVLETKYPYVVHAELNAILN-SKWPVKDCTIYVSLFPCNECAKAIIQSGIRRVVYESDK 119
Score = 73.6 bits (179), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 36/65 (55%), Positives = 44/65 (67%), Gaps = 1/65 (1%)
Query: 1 MNAILNKNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIYMCDKHKQKPATIASKRMFD 60
+NAILN + K C +Y SLFPCNECAK IIQSGI+ V+Y DK+ IASKRM +
Sbjct: 76 LNAILN-SKWPVKDCTIYVSLFPCNECAKAIIQSGIRRVVYESDKYNGTEMNIASKRMLE 134
Query: 61 AAKVH 65
+A V
Sbjct: 135 SAGVE 139
>gi|413952319|gb|AFW84968.1| hypothetical protein ZEAMMB73_364855 [Zea mays]
Length = 242
Score = 128 bits (322), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 63/126 (50%), Positives = 85/126 (67%), Gaps = 8/126 (6%)
Query: 81 PHKRVDDVLEWHEYFMASAFLVAKRSKDPVTRVGAVIVNEDNKIVGTGYNGMPIGCSDDE 140
P KR + + W +YFMA AFL A+RSKDP +VGA +V+++ I+G GYNG P GCSDD+
Sbjct: 61 PVKR-EGYISWDDYFMAIAFLSAERSKDPNRQVGACLVSQEGIILGIGYNGFPRGCSDDK 119
Query: 141 FPWDKN--THDELD-----MCHAEMNAILNKNSADTKRCKLYTSLFPCNECAKVIIQSGI 193
PW K + D L+ + HAE+NAILN N A KLY ++FPCNECAK+IIQ+ +
Sbjct: 120 LPWAKKSASGDPLETKFPYVVHAEVNAILNTNHASAAGQKLYVTMFPCNECAKIIIQAYL 179
Query: 194 KEVIYM 199
+ I +
Sbjct: 180 RSYISL 185
Score = 51.6 bits (122), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 22/42 (52%), Positives = 30/42 (71%)
Query: 1 MNAILNKNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIYM 42
+NAILN N A KLY ++FPCNECAK+IIQ+ ++ I +
Sbjct: 144 VNAILNTNHASAAGQKLYVTMFPCNECAKIIIQAYLRSYISL 185
>gi|307107941|gb|EFN56182.1| hypothetical protein CHLNCDRAFT_13299, partial [Chlorella
variabilis]
Length = 118
Score = 128 bits (322), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 62/111 (55%), Positives = 77/111 (69%), Gaps = 7/111 (6%)
Query: 89 LEWHEYFMASAFLVAKRSKDPVTRVGAVIVNEDNKIVGTGYNGMPIGCSDDEFPWDKNTH 148
L W +YFMA AFL A+RSKDP +VGA IV+ +N I G GYNG P GC D + PW K +
Sbjct: 8 LSWDDYFMAVAFLSAQRSKDPNKQVGACIVDRNNVICGIGYNGFPRGCPDSKLPWAKKSR 67
Query: 149 --DELD-----MCHAEMNAILNKNSADTKRCKLYTSLFPCNECAKVIIQSG 192
D LD +CHAEMNAILNKN A + K++ ++FPCNECAK++IQ G
Sbjct: 68 RGDPLDTKYPYVCHAEMNAILNKNGASVEGAKVFVTMFPCNECAKLMIQVG 118
Score = 50.1 bits (118), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 21/35 (60%), Positives = 28/35 (80%)
Query: 1 MNAILNKNSADTKRCKLYTSLFPCNECAKVIIQSG 35
MNAILNKN A + K++ ++FPCNECAK++IQ G
Sbjct: 84 MNAILNKNGASVEGAKVFVTMFPCNECAKLMIQVG 118
>gi|339253072|ref|XP_003371759.1| deoxycytidylate deaminase [Trichinella spiralis]
gi|316967943|gb|EFV52296.1| deoxycytidylate deaminase [Trichinella spiralis]
Length = 155
Score = 128 bits (321), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 58/118 (49%), Positives = 78/118 (66%), Gaps = 5/118 (4%)
Query: 80 SPHKRVDDVLEWHEYFMASAFLVAKRSKDPVTRVGAVIVNEDNKIVGTGYNGMPIGCSDD 139
S +++ +D + W +YFM A L +KRSKDP+ + GA IVN DN I+G GYNGMP GCSDD
Sbjct: 3 SANQKREDYISWTDYFMGVALLSSKRSKDPIMQEGACIVNSDNHIIGVGYNGMPAGCSDD 62
Query: 140 EFPWDKNTHDELD-----MCHAEMNAILNKNSADTKRCKLYTSLFPCNECAKVIIQSG 192
PW + L+ +CHA +NA++NK S K C LYT+ PC+ CA ++IQSG
Sbjct: 63 RMPWADQANSILETKHPYICHAALNAVVNKISNSAKGCCLYTTHLPCSHCAGLLIQSG 120
Score = 48.9 bits (115), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/66 (37%), Positives = 37/66 (56%), Gaps = 9/66 (13%)
Query: 1 MNAILNKNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIYMCDKHKQKPATIASKRMFD 60
+NA++NK S K C LYT+ PC+ CA ++IQSG +T A++R+F
Sbjct: 86 LNAVVNKISNSAKGCCLYTTHLPCSHCAGLLIQSG---------NSLDTISTAATERLFK 136
Query: 61 AAKVHY 66
+ VHY
Sbjct: 137 ESGVHY 142
>gi|164688345|ref|ZP_02212373.1| hypothetical protein CLOBAR_01990 [Clostridium bartlettii DSM
16795]
gi|164602758|gb|EDQ96223.1| cytidine and deoxycytidylate deaminase zinc-binding region
[Clostridium bartlettii DSM 16795]
Length = 163
Score = 128 bits (321), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 62/121 (51%), Positives = 82/121 (67%), Gaps = 6/121 (4%)
Query: 87 DVLEWHEYFMASAFLVAKRSKDPVTRVGAVIVNEDNKIVGTGYNGMPIGCSDDEFPWDKN 146
D + W EYFM + L RSKDP T+VGA IV+ DN+IV GYNG GCSD++FPW++
Sbjct: 5 DYISWDEYFMGISLLSGMRSKDPSTQVGACIVDSDNRIVSIGYNGFLNGCSDEDFPWERE 64
Query: 147 THDELD-----MCHAEMNAILNKNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIYMCD 201
D L+ + HAE NAILN + + C +Y +LFPC++CA+ IIQSGIK+V Y+ D
Sbjct: 65 G-DFLNTKYPYVVHAEQNAILNARGKNLEGCSIYVNLFPCHDCARNIIQSGIKKVYYLED 123
Query: 202 K 202
K
Sbjct: 124 K 124
Score = 71.2 bits (173), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 34/64 (53%), Positives = 46/64 (71%)
Query: 2 NAILNKNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIYMCDKHKQKPATIASKRMFDA 61
NAILN + + C +Y +LFPC++CA+ IIQSGIK+V Y+ DK+K +T ASK MF+
Sbjct: 81 NAILNARGKNLEGCSIYVNLFPCHDCARNIIQSGIKKVYYLEDKYKDTDSTKASKFMFEK 140
Query: 62 AKVH 65
AKV
Sbjct: 141 AKVE 144
>gi|355575773|ref|ZP_09045146.1| hypothetical protein HMPREF1008_01123 [Olsenella sp. oral taxon 809
str. F0356]
gi|354816989|gb|EHF01499.1| hypothetical protein HMPREF1008_01123 [Olsenella sp. oral taxon 809
str. F0356]
Length = 161
Score = 127 bits (320), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 62/129 (48%), Positives = 84/129 (65%), Gaps = 8/129 (6%)
Query: 81 PHKRVDDVLEWHEYFMASAFLVAKRSKDPVTRVGAVIVNEDNKIVGTGYNGMPIGCSDDE 140
P KR DV+ W E+FM AF + RSKDP T+VGA I + +N+I+ GYNG P+G DDE
Sbjct: 2 PGKR-SDVISWDEFFMRVAFAASLRSKDPKTQVGACIADVNNRILSVGYNGTPMGIGDDE 60
Query: 141 FPWDKNTHDELD-----MCHAEMNAILNKNSA--DTKRCKLYTSLFPCNECAKVIIQSGI 193
FPW +D L + HAE NAILN + D + +Y +LFPC ECAK+++Q+GI
Sbjct: 61 FPWGSPENDPLHDKHSYVVHAEANAILNYRGSLKDMQGATMYVTLFPCQECAKMLVQAGI 120
Query: 194 KEVIYMCDK 202
+V+Y+ DK
Sbjct: 121 GKVVYLDDK 129
Score = 56.6 bits (135), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 26/67 (38%), Positives = 40/67 (59%), Gaps = 2/67 (2%)
Query: 2 NAILNKNSA--DTKRCKLYTSLFPCNECAKVIIQSGIKEVIYMCDKHKQKPATIASKRMF 59
NAILN + D + +Y +LFPC ECAK+++Q+GI +V+Y+ DK+ S+
Sbjct: 84 NAILNYRGSLKDMQGATMYVTLFPCQECAKMLVQAGIGKVVYLDDKYHDTLGAQISRTAL 143
Query: 60 DAAKVHY 66
D+ V Y
Sbjct: 144 DSCGVSY 150
>gi|162447679|ref|YP_001620811.1| deoxycytidylate deaminase [Acholeplasma laidlawii PG-8A]
gi|161985786|gb|ABX81435.1| deoxycytidylate deaminase [Acholeplasma laidlawii PG-8A]
Length = 158
Score = 127 bits (320), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 61/118 (51%), Positives = 79/118 (66%), Gaps = 5/118 (4%)
Query: 89 LEWHEYFMASAFLVAKRSKDPVTRVGAVIVNEDNKIVGTGYNGMPIGCSDDEFPWDKNTH 148
+ W +YFM A L A RSKDP T+VGA I+N D +IV GYNG+P+G SDDE W KN
Sbjct: 7 ISWDQYFMGVAKLSALRSKDPNTQVGACIINPDRRIVAIGYNGLPMGLSDDEDFWQKNED 66
Query: 149 DELD----MCHAEMNAILNKNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIYMCDK 202
+ HAE NAILN ++ K LY +LFPCNEC K+++Q+G+KE++YM DK
Sbjct: 67 YSKSKYAYVVHAEANAILNATTS-LKDATLYVTLFPCNECMKLLVQAGVKEIVYMSDK 123
Score = 67.0 bits (162), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 31/63 (49%), Positives = 43/63 (68%), Gaps = 1/63 (1%)
Query: 2 NAILNKNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIYMCDKHKQKPATIASKRMFDA 61
NAILN ++ K LY +LFPCNEC K+++Q+G+KE++YM DK K K + IAS M
Sbjct: 81 NAILNATTS-LKDATLYVTLFPCNECMKLLVQAGVKEIVYMSDKDKGKESHIASTTMMKK 139
Query: 62 AKV 64
A +
Sbjct: 140 AGI 142
>gi|331703568|ref|YP_004400255.1| deoxycytidylate deaminase [Mycoplasma mycoides subsp. capri LC str.
95010]
gi|328802123|emb|CBW54277.1| Deoxycytidylate deaminase (dCMP deaminase) [Mycoplasma mycoides
subsp. capri LC str. 95010]
Length = 146
Score = 127 bits (319), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 61/104 (58%), Positives = 74/104 (71%), Gaps = 6/104 (5%)
Query: 103 AKRSKDPVTRVGAVIVNEDNKIVGTGYNGMPIGCSDDEFPWDKNTHDELD-----MCHAE 157
A RSKDP T+VGA++VNE +IV TGYNG P G SDDEFPW KN D L+ + HAE
Sbjct: 8 AMRSKDPNTQVGAIVVNELQQIVATGYNGFPRGVSDDEFPWSKNNEDWLENKYAYVAHAE 67
Query: 158 MNAILNKNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIYMCD 201
+NAI++ S D C LY +LFPCNECAK+IIQ+GIK + Y D
Sbjct: 68 LNAIVSSRS-DLSNCDLYVTLFPCNECAKIIIQAGIKRIYYAND 110
Score = 72.4 bits (176), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 34/66 (51%), Positives = 44/66 (66%), Gaps = 1/66 (1%)
Query: 1 MNAILNKNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIYMCDKHKQKPATIASKRMFD 60
+NAI++ S D C LY +LFPCNECAK+IIQ+GIK + Y D + K IASK+M D
Sbjct: 68 LNAIVSSRS-DLSNCDLYVTLFPCNECAKIIIQAGIKRIYYANDPYHDKKEFIASKKMLD 126
Query: 61 AAKVHY 66
A + Y
Sbjct: 127 AVNIKY 132
>gi|308189593|ref|YP_003922524.1| dCMP deaminase [Mycoplasma fermentans JER]
gi|319776745|ref|YP_004136396.1| deoxycytidylate deaminase protein [Mycoplasma fermentans M64]
gi|238810149|dbj|BAH69939.1| hypothetical protein [Mycoplasma fermentans PG18]
gi|307624335|gb|ADN68640.1| dCMP deaminase [Mycoplasma fermentans JER]
gi|318037820|gb|ADV34019.1| Deoxycytidylate deaminase protein [Mycoplasma fermentans M64]
Length = 163
Score = 126 bits (317), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 64/119 (53%), Positives = 81/119 (68%), Gaps = 7/119 (5%)
Query: 89 LEWHEYFMASAFLVAKRSKDPVTRVGAVIVNEDNKIVGTGYNGMPIGCSDDEFPWDKNTH 148
L W YFMA A + A RSKDP T+VGA +VNE+ +I+ GYNGMP G DDEFPWD+
Sbjct: 6 LYWDGYFMALAKVSALRSKDPSTKVGACVVNENKRIIALGYNGMPKGI-DDEFPWDREGE 64
Query: 149 DELD-----MCHAEMNAILNKNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIYMCDK 202
+ + HAEMNAILN N+ + + C ++TSL+PC+ CAK I QSGI EV+Y DK
Sbjct: 65 SPKETKYAYVVHAEMNAILNTNN-NLQGCTIFTSLYPCSSCAKTIAQSGISEVVYEDDK 122
Score = 58.2 bits (139), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 31/65 (47%), Positives = 45/65 (69%), Gaps = 3/65 (4%)
Query: 1 MNAILNKNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIYMCDK-HKQKPATIASKRMF 59
MNAILN N+ + + C ++TSL+PC+ CAK I QSGI EV+Y DK H + A IA + +
Sbjct: 79 MNAILNTNN-NLQGCTIFTSLYPCSSCAKTIAQSGISEVVYEDDKYHDTEDAEIA-RHIL 136
Query: 60 DAAKV 64
+A+ +
Sbjct: 137 NASNI 141
>gi|283481246|emb|CAZ69362.1| putative deoxycytidylate deaminase [Emiliania huxleyi virus 99B1]
Length = 173
Score = 126 bits (317), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 62/122 (50%), Positives = 79/122 (64%), Gaps = 10/122 (8%)
Query: 89 LEWHEYFMASAFLVAKRSKDPVTRVGAVIV-NEDNKIVGTGYNGMPIGCSDDEFPWDK-- 145
+ W +YFM A L A RSKDP T+VG+ I+ + NKI+ GYNGMP GC+DD+FPW K
Sbjct: 18 ISWDQYFMGVAKLSAMRSKDPSTQVGSCIIESTTNKIISIGYNGMPRGCNDDDFPWGKKE 77
Query: 146 ------NTHDELDMCHAEMNAILNKNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIYM 199
NT + H+E NAILN N C +Y +LFPCNEC K+IIQSGI E++Y+
Sbjct: 78 KNSNIINTKYPF-VVHSEANAILNANGTSVNGCTMYVTLFPCNECTKLIIQSGICEIVYL 136
Query: 200 CD 201
D
Sbjct: 137 DD 138
Score = 65.5 bits (158), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 31/63 (49%), Positives = 39/63 (61%), Gaps = 1/63 (1%)
Query: 2 NAILNKNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIYMCDKHKQKPATIASKRMFDA 61
NAILN N C +Y +LFPCNEC K+IIQSGI E++Y+ D + AS RM +
Sbjct: 96 NAILNANGTSVNGCTMYVTLFPCNECTKLIIQSGICEIVYL-DDYNDITTKTASLRMLQS 154
Query: 62 AKV 64
A V
Sbjct: 155 AGV 157
>gi|347482300|gb|AEO98241.1| deoxycytidylate deaminase [Emiliania huxleyi virus 203]
gi|347601757|gb|AEP16242.1| deoxycytidylate deaminase [Emiliania huxleyi virus 208]
gi|357972638|gb|AET97911.1| deoxycytidylate deaminase [Emiliania huxleyi virus 201]
Length = 173
Score = 126 bits (317), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 62/124 (50%), Positives = 79/124 (63%), Gaps = 10/124 (8%)
Query: 87 DVLEWHEYFMASAFLVAKRSKDPVTRVGAVIV-NEDNKIVGTGYNGMPIGCSDDEFPWDK 145
D + W +YFM A L A RSKDP T+VG+ I+ + NKI+ GYNGMP GC+DD+FPW K
Sbjct: 16 DYISWDQYFMGVAKLSAMRSKDPSTQVGSCIIESTTNKIISIGYNGMPRGCNDDDFPWGK 75
Query: 146 --------NTHDELDMCHAEMNAILNKNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVI 197
NT + H+E NAILN C +Y +LFPCNEC K+IIQSGI E++
Sbjct: 76 KEKNSNILNTKYPF-VVHSEANAILNATGTSVNGCTMYVTLFPCNECTKLIIQSGICEIV 134
Query: 198 YMCD 201
Y+ D
Sbjct: 135 YLDD 138
Score = 63.5 bits (153), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 30/63 (47%), Positives = 38/63 (60%), Gaps = 1/63 (1%)
Query: 2 NAILNKNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIYMCDKHKQKPATIASKRMFDA 61
NAILN C +Y +LFPCNEC K+IIQSGI E++Y+ D + AS RM +
Sbjct: 96 NAILNATGTSVNGCTMYVTLFPCNECTKLIIQSGICEIVYL-DDYNDITTKTASLRMLQS 154
Query: 62 AKV 64
A V
Sbjct: 155 AGV 157
>gi|347481847|gb|AEO97833.1| dCMP deaminase [Emiliania huxleyi virus 84]
gi|347600472|gb|AEP14959.1| dCMP deaminase [Emiliania huxleyi virus 88]
Length = 173
Score = 126 bits (316), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 62/124 (50%), Positives = 79/124 (63%), Gaps = 10/124 (8%)
Query: 87 DVLEWHEYFMASAFLVAKRSKDPVTRVGAVIV-NEDNKIVGTGYNGMPIGCSDDEFPWDK 145
D + W +YFM A L A RSKDP T+VG+ I+ ++ NKI+ GYNGMP GC DD+FPW K
Sbjct: 16 DYISWDQYFMGVAKLSAMRSKDPSTQVGSCIIESKTNKIISIGYNGMPRGCDDDDFPWGK 75
Query: 146 --------NTHDELDMCHAEMNAILNKNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVI 197
NT + H+E NAILN C +Y +LFPCNEC K+IIQSGI E++
Sbjct: 76 KEKNSNILNTKYPF-VVHSEANAILNATGTSVNGCTMYVTLFPCNECTKLIIQSGICEIV 134
Query: 198 YMCD 201
Y+ D
Sbjct: 135 YLDD 138
Score = 63.2 bits (152), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 30/63 (47%), Positives = 38/63 (60%), Gaps = 1/63 (1%)
Query: 2 NAILNKNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIYMCDKHKQKPATIASKRMFDA 61
NAILN C +Y +LFPCNEC K+IIQSGI E++Y+ D + AS RM +
Sbjct: 96 NAILNATGTSVNGCTMYVTLFPCNECTKLIIQSGICEIVYL-DDYNDITTKTASLRMLQS 154
Query: 62 AKV 64
A V
Sbjct: 155 AGV 157
>gi|71894411|ref|YP_278519.1| deoxycytidylate deaminase fusion protein [Mycoplasma synoviae 53]
Length = 169
Score = 126 bits (316), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 64/125 (51%), Positives = 83/125 (66%), Gaps = 7/125 (5%)
Query: 84 RVDDVLEWHEYFMASAFLVAKRSKDPVTRVGAVIVNEDNKIVGTGYNGMPIGCSDDEFPW 143
+++ + W +YFM A L A RSKDP T+VGA IVN N I+G GYNGMP G D+ FPW
Sbjct: 7 KLNKAISWDDYFMGLAKLSALRSKDPSTQVGACIVNRQNHIIGMGYNGMPNG-EDELFPW 65
Query: 144 DKNTHDELD-----MCHAEMNAILNKNS-ADTKRCKLYTSLFPCNECAKVIIQSGIKEVI 197
+ N+ DE D + HAE+NAILN + +YTSLFPC+ CAK+I+QS IKE++
Sbjct: 66 ESNSSDEKDNKYPYVMHAEVNAILNTSVMLQNSNATIYTSLFPCSNCAKIIVQSQIKELV 125
Query: 198 YMCDK 202
Y DK
Sbjct: 126 YEDDK 130
Score = 53.5 bits (127), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 31/66 (46%), Positives = 42/66 (63%), Gaps = 3/66 (4%)
Query: 1 MNAILNKNS-ADTKRCKLYTSLFPCNECAKVIIQSGIKEVIYMCDK-HKQKPATIASKRM 58
+NAILN + +YTSLFPC+ CAK+I+QS IKE++Y DK H K A I S+ +
Sbjct: 85 VNAILNTSVMLQNSNATIYTSLFPCSNCAKIIVQSQIKELVYEDDKYHDTKDAEI-SRYI 143
Query: 59 FDAAKV 64
+ KV
Sbjct: 144 LETGKV 149
>gi|144575095|gb|AAZ43808.2| deoxycytidylate deaminase fusion protein [Mycoplasma synoviae 53]
Length = 168
Score = 126 bits (316), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 64/125 (51%), Positives = 83/125 (66%), Gaps = 7/125 (5%)
Query: 84 RVDDVLEWHEYFMASAFLVAKRSKDPVTRVGAVIVNEDNKIVGTGYNGMPIGCSDDEFPW 143
+++ + W +YFM A L A RSKDP T+VGA IVN N I+G GYNGMP G D+ FPW
Sbjct: 6 KLNKAISWDDYFMGLAKLSALRSKDPSTQVGACIVNRQNHIIGMGYNGMPNG-EDELFPW 64
Query: 144 DKNTHDELD-----MCHAEMNAILNKNS-ADTKRCKLYTSLFPCNECAKVIIQSGIKEVI 197
+ N+ DE D + HAE+NAILN + +YTSLFPC+ CAK+I+QS IKE++
Sbjct: 65 ESNSSDEKDNKYPYVMHAEVNAILNTSVMLQNSNATIYTSLFPCSNCAKIIVQSQIKELV 124
Query: 198 YMCDK 202
Y DK
Sbjct: 125 YEDDK 129
Score = 53.5 bits (127), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 31/66 (46%), Positives = 42/66 (63%), Gaps = 3/66 (4%)
Query: 1 MNAILNKNS-ADTKRCKLYTSLFPCNECAKVIIQSGIKEVIYMCDK-HKQKPATIASKRM 58
+NAILN + +YTSLFPC+ CAK+I+QS IKE++Y DK H K A I S+ +
Sbjct: 84 VNAILNTSVMLQNSNATIYTSLFPCSNCAKIIVQSQIKELVYEDDKYHDTKDAEI-SRYI 142
Query: 59 FDAAKV 64
+ KV
Sbjct: 143 LETGKV 148
>gi|347601380|gb|AEP15866.1| deoxycytidylate deaminase [Emiliania huxleyi virus 207]
Length = 173
Score = 125 bits (315), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 62/124 (50%), Positives = 79/124 (63%), Gaps = 10/124 (8%)
Query: 87 DVLEWHEYFMASAFLVAKRSKDPVTRVGAVIV-NEDNKIVGTGYNGMPIGCSDDEFPWDK 145
D + W +YFM A L A RSKDP T+VG+ I+ + NKI+ GYNGMP GC+DD+FPW K
Sbjct: 16 DYISWDQYFMGVAKLSAMRSKDPNTQVGSCIIESTTNKIISIGYNGMPRGCNDDDFPWGK 75
Query: 146 --------NTHDELDMCHAEMNAILNKNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVI 197
NT + H+E NAILN C +Y +LFPCNEC K+IIQSGI E++
Sbjct: 76 KEKNSNILNTKYPF-VVHSEANAILNATGTSVNGCTMYVTLFPCNECTKLIIQSGICEIV 134
Query: 198 YMCD 201
Y+ D
Sbjct: 135 YLDD 138
Score = 63.5 bits (153), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 30/63 (47%), Positives = 38/63 (60%), Gaps = 1/63 (1%)
Query: 2 NAILNKNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIYMCDKHKQKPATIASKRMFDA 61
NAILN C +Y +LFPCNEC K+IIQSGI E++Y+ D + AS RM +
Sbjct: 96 NAILNATGTSVNGCTMYVTLFPCNECTKLIIQSGICEIVYL-DDYNDITTKTASLRMLQS 154
Query: 62 AKV 64
A V
Sbjct: 155 AGV 157
>gi|356927837|gb|AET42627.1| deoxycytidylate deaminase [Emiliania huxleyi virus 202]
Length = 173
Score = 125 bits (313), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 62/123 (50%), Positives = 79/123 (64%), Gaps = 8/123 (6%)
Query: 87 DVLEWHEYFMASAFLVAKRSKDPVTRVGAVIVN-EDNKIVGTGYNGMPIGCSDDEFPW-- 143
D + W +YFM A L A RSKDP T+VG+ I+ NKIV GYNG P GC+DDEFPW
Sbjct: 16 DYIAWDQYFMGVAKLSAMRSKDPNTQVGSCIIEPSTNKIVSIGYNGFPRGCNDDEFPWGR 75
Query: 144 -DKNTH----DELDMCHAEMNAILNKNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIY 198
+KNT+ + H+E N+ILN N C +Y +LFPCNEC K+IIQSGI E+++
Sbjct: 76 KEKNTNILNTKYPFVVHSEANSILNANGTSVNGCTMYVTLFPCNECTKLIIQSGIAEIVF 135
Query: 199 MCD 201
D
Sbjct: 136 FDD 138
Score = 63.5 bits (153), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 29/63 (46%), Positives = 38/63 (60%), Gaps = 1/63 (1%)
Query: 2 NAILNKNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIYMCDKHKQKPATIASKRMFDA 61
N+ILN N C +Y +LFPCNEC K+IIQSGI E+++ D + AS RM +
Sbjct: 96 NSILNANGTSVNGCTMYVTLFPCNECTKLIIQSGIAEIVFF-DDYADSTIKTASLRMLQS 154
Query: 62 AKV 64
A V
Sbjct: 155 AGV 157
>gi|359402666|ref|ZP_09195573.1| deoxycytidylate deaminase [Spiroplasma melliferum KC3]
gi|438117278|ref|ZP_20871049.1| deoxycytidylate deaminase [Spiroplasma melliferum IPMB4A]
gi|357967883|gb|EHJ90392.1| deoxycytidylate deaminase [Spiroplasma melliferum KC3]
gi|434156120|gb|ELL45007.1| deoxycytidylate deaminase [Spiroplasma melliferum IPMB4A]
Length = 166
Score = 125 bits (313), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 60/125 (48%), Positives = 89/125 (71%), Gaps = 5/125 (4%)
Query: 82 HKRVDDVLEWHEYFMASAFLVAKRSKDPVTRVGAVIVNEDNKIVGTGYNGMPIGCSDDEF 141
K+ +D L W ++F++ A + A RSKDP T+VG+ +VN+ +I+ TGYNG+P G +DD+F
Sbjct: 6 EKKRNDYLSWDDFFLSVAHVCAMRSKDPHTQVGSCVVNQIGQIIATGYNGLPRGLNDDDF 65
Query: 142 PWDK-NTHDELD---MCHAEMNAILNKNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVI 197
PW + + E + HAE+NAIL+ + + + C++YT+LFPC EC K+IIQ+GIKEVI
Sbjct: 66 PWAREGKYLETKYPYVAHAELNAILSART-NLENCRIYTTLFPCAECTKIIIQAGIKEVI 124
Query: 198 YMCDK 202
Y DK
Sbjct: 125 YDDDK 129
Score = 73.6 bits (179), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 35/66 (53%), Positives = 49/66 (74%), Gaps = 1/66 (1%)
Query: 1 MNAILNKNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIYMCDKHKQKPATIASKRMFD 60
+NAIL+ + + + C++YT+LFPC EC K+IIQ+GIKEVIY DK++ A+KRMFD
Sbjct: 86 LNAILSART-NLENCRIYTTLFPCAECTKIIIQAGIKEVIYDDDKYEGSDDNQAAKRMFD 144
Query: 61 AAKVHY 66
A+V Y
Sbjct: 145 QAQVRY 150
>gi|302837985|ref|XP_002950551.1| hypothetical protein VOLCADRAFT_81171 [Volvox carteri f.
nagariensis]
gi|300264100|gb|EFJ48297.1| hypothetical protein VOLCADRAFT_81171 [Volvox carteri f.
nagariensis]
Length = 280
Score = 124 bits (312), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 61/118 (51%), Positives = 78/118 (66%), Gaps = 11/118 (9%)
Query: 96 MASAFLVAKRSKDPVTRVGAVIVNEDNKIVGTGYNGMPIGCSDDEFPWDK------NTHD 149
MA AFL A+RSKDP +VGAVIVN DN I+ GYNG P GC D + PW K D
Sbjct: 1 MALAFLSAERSKDPNKQVGAVIVNVDNIILAIGYNGFPRGCCDSDLPWAKEALSSDGNPD 60
Query: 150 ELD-----MCHAEMNAILNKNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIYMCDK 202
L + HAE NA+LNKN+A ++Y ++FPCNECAK++IQ+G++EV+Y DK
Sbjct: 61 PLATKYPYVVHAEANALLNKNAASVAGARVYVTMFPCNECAKLLIQAGVREVVYHEDK 118
Score = 63.5 bits (153), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 24/44 (54%), Positives = 36/44 (81%)
Query: 2 NAILNKNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIYMCDK 45
NA+LNKN+A ++Y ++FPCNECAK++IQ+G++EV+Y DK
Sbjct: 75 NALLNKNAASVAGARVYVTMFPCNECAKLLIQAGVREVVYHEDK 118
>gi|110004586|emb|CAK98923.1| deoxycytidylate deaminase protein [Spiroplasma citri]
Length = 166
Score = 124 bits (311), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 60/125 (48%), Positives = 88/125 (70%), Gaps = 5/125 (4%)
Query: 82 HKRVDDVLEWHEYFMASAFLVAKRSKDPVTRVGAVIVNEDNKIVGTGYNGMPIGCSDDEF 141
K+ +D L W ++F++ A + A RSKDP T+VG+ +VN+ +I+ TGYNG+P G +DD F
Sbjct: 6 EKKRNDYLSWDDFFLSVAHVCAMRSKDPHTQVGSCVVNQIGQIIATGYNGLPRGLNDDVF 65
Query: 142 PWDK-NTHDELD---MCHAEMNAILNKNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVI 197
PW + + E + HAE+NAIL+ + + + C++YT+LFPC EC K+IIQ+GIKEVI
Sbjct: 66 PWSREGKYLETKYPYVAHAELNAILSART-NLENCRIYTTLFPCAECTKIIIQAGIKEVI 124
Query: 198 YMCDK 202
Y DK
Sbjct: 125 YDDDK 129
Score = 73.6 bits (179), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 35/66 (53%), Positives = 49/66 (74%), Gaps = 1/66 (1%)
Query: 1 MNAILNKNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIYMCDKHKQKPATIASKRMFD 60
+NAIL+ + + + C++YT+LFPC EC K+IIQ+GIKEVIY DK++ A+KRMFD
Sbjct: 86 LNAILSART-NLENCRIYTTLFPCAECTKIIIQAGIKEVIYDDDKYEGSDDNQAAKRMFD 144
Query: 61 AAKVHY 66
A+V Y
Sbjct: 145 QAQVRY 150
>gi|302335967|ref|YP_003801174.1| dCMP deaminase [Olsenella uli DSM 7084]
gi|301319807|gb|ADK68294.1| dCMP deaminase [Olsenella uli DSM 7084]
Length = 160
Score = 124 bits (310), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 61/128 (47%), Positives = 81/128 (63%), Gaps = 7/128 (5%)
Query: 81 PHKRVDDVLEWHEYFMASAFLVAKRSKDPVTRVGAVIVNEDNKIVGTGYNGMPIGCSDDE 140
P KR DV+ W E+FM A + RSKDP T+VGA I + +++I+ GYNG P G DDE
Sbjct: 2 PGKR-SDVISWDEFFMRVAIAASLRSKDPKTQVGACIADTNDRILSVGYNGTPSGLDDDE 60
Query: 141 FPWDKNTHDELD----MCHAEMNAILNKNSA--DTKRCKLYTSLFPCNECAKVIIQSGIK 194
FPW + D + HAE NAILN + D + K+Y +LFPC ECAK ++Q+G+
Sbjct: 61 FPWGTSEDPLFDKHNYVIHAEANAILNYRGSLKDMQGAKVYVTLFPCQECAKTLVQAGVG 120
Query: 195 EVIYMCDK 202
EVIY+ DK
Sbjct: 121 EVIYLDDK 128
Score = 62.4 bits (150), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 29/67 (43%), Positives = 41/67 (61%), Gaps = 2/67 (2%)
Query: 2 NAILNKNSA--DTKRCKLYTSLFPCNECAKVIIQSGIKEVIYMCDKHKQKPATIASKRMF 59
NAILN + D + K+Y +LFPC ECAK ++Q+G+ EVIY+ DK+ SK +F
Sbjct: 83 NAILNYRGSLKDMQGAKVYVTLFPCQECAKTLVQAGVGEVIYLDDKYDGTEGNRVSKSVF 142
Query: 60 DAAKVHY 66
D + Y
Sbjct: 143 DRCGITY 149
>gi|392388725|ref|YP_005907134.1| deoxycytidylate deaminase [Mycoplasma leachii 99/014/6]
gi|339276370|emb|CBV66949.1| Probable deoxycytidylate deaminase [Mycoplasma leachii 99/014/6]
Length = 146
Score = 123 bits (309), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 59/104 (56%), Positives = 73/104 (70%), Gaps = 6/104 (5%)
Query: 103 AKRSKDPVTRVGAVIVNEDNKIVGTGYNGMPIGCSDDEFPWDKNTHDELD-----MCHAE 157
A RSKDP T+VGA++VNE +IV TGYNG P G SDD+FPW K D L+ + HAE
Sbjct: 8 AMRSKDPNTQVGAIVVNELQQIVATGYNGFPRGVSDDDFPWSKTNEDWLENKYAYVAHAE 67
Query: 158 MNAILNKNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIYMCD 201
+NAI++ S D C LY +LFPCNECAK+IIQ+GIK + Y D
Sbjct: 68 LNAIVSSRS-DLSNCDLYVTLFPCNECAKIIIQAGIKRIYYAND 110
Score = 74.7 bits (182), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 35/66 (53%), Positives = 45/66 (68%), Gaps = 1/66 (1%)
Query: 1 MNAILNKNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIYMCDKHKQKPATIASKRMFD 60
+NAI++ S D C LY +LFPCNECAK+IIQ+GIK + Y D + QK IASK+M D
Sbjct: 68 LNAIVSSRS-DLSNCDLYVTLFPCNECAKIIIQAGIKRIYYANDPYHQKKEFIASKKMLD 126
Query: 61 AAKVHY 66
A + Y
Sbjct: 127 AVNIKY 132
>gi|406885544|gb|EKD32712.1| hypothetical protein ACD_76C00161G0011 [uncultured bacterium]
Length = 168
Score = 123 bits (309), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 61/124 (49%), Positives = 80/124 (64%), Gaps = 5/124 (4%)
Query: 83 KRVDDVLEWHEYFMASAFLVAKRSKDPVTRVGAVIVNEDNKIVGTGYNGMPIGCSDDEFP 142
++ + L W E FM A L+++RSKDP T+ GAVIVN +N +VG GYNG P G DD+ P
Sbjct: 4 QKREHYLSWDECFMHMAHLMSERSKDPNTQAGAVIVNPENIVVGLGYNGWPRGIHDDKLP 63
Query: 143 WDKNTH----DELDMCHAEMNAILNKNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIY 198
W + + HAE NA+ N N A CK+Y +LFPCNECAK IIQ+GI+EV++
Sbjct: 64 WGREGSFLETKYAYVVHAEANAVYNSN-APVSGCKIYVTLFPCNECAKAIIQNGIREVVF 122
Query: 199 MCDK 202
DK
Sbjct: 123 ASDK 126
Score = 65.5 bits (158), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 33/80 (41%), Positives = 47/80 (58%), Gaps = 1/80 (1%)
Query: 2 NAILNKNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIYMCDKHKQKPATIASKRMFDA 61
NA+ N N A CK+Y +LFPCNECAK IIQ+GI+EV++ DK+ + AS+ M
Sbjct: 84 NAVYNSN-APVSGCKIYVTLFPCNECAKAIIQNGIREVVFASDKYADQDVFKASRNMLAL 142
Query: 62 AKVHYWSEMDKMNGVQNGSP 81
A ++ + + NG P
Sbjct: 143 AGINLREYIPQYKLKLNGFP 162
>gi|294660212|ref|NP_852829.2| bifunctional dihydrofolate reductase/deoxycytidylate deaminase
[Mycoplasma gallisepticum str. R(low)]
gi|385325134|ref|YP_005879572.1| Bifunctional protein including dihydrofolate reductase and
deoxycytidylate deaminase family domains [Mycoplasma
gallisepticum str. R(high)]
gi|385325901|ref|YP_005880338.1| Bifunctional protein including dihydrofolate reductase and
deoxycytidylate deaminase family domains [Mycoplasma
gallisepticum str. F]
gi|401765903|ref|YP_006580909.1| bifunctional dihydrofolate reductase/deoxycytidylate deaminase
[Mycoplasma gallisepticum VA94_7994-1-7P]
gi|401766671|ref|YP_006581676.1| bifunctional dihydrofolate reductase/deoxycytidylate deaminase
[Mycoplasma gallisepticum NC95_13295-2-2P]
gi|401767426|ref|YP_006582430.1| bifunctional dihydrofolate reductase/deoxycytidylate deaminase
[Mycoplasma gallisepticum NC96_1596-4-2P]
gi|401768198|ref|YP_006583201.1| bifunctional dihydrofolate reductase/deoxycytidylate deaminase
[Mycoplasma gallisepticum NY01_2001.047-5-1P]
gi|401768959|ref|YP_006583961.1| bifunctional dihydrofolate reductase/deoxycytidylate deaminase
[Mycoplasma gallisepticum WI01_2001.043-13-2P]
gi|401769706|ref|YP_006584707.1| bifunctional dihydrofolate reductase/deoxycytidylate deaminase
[Mycoplasma gallisepticum NC06_2006.080-5-2P]
gi|401770451|ref|YP_006585451.1| bifunctional dihydrofolate reductase/deoxycytidylate deaminase
[Mycoplasma gallisepticum CA06_2006.052-5-2P]
gi|401771215|ref|YP_006586214.1| bifunctional dihydrofolate reductase/deoxycytidylate deaminase
[Mycoplasma gallisepticum NC08_2008.031-4-3P]
gi|5565934|gb|AAD45277.1|AF152114_5 dihydrofolate reductase/deoxycytidylate deaminase fusion protein
[Mycoplasma gallisepticum]
gi|284811862|gb|AAP56397.2| Bifunctional protein including dihydrofolate reductase and
deoxycytidylate deaminase family domains [Mycoplasma
gallisepticum str. R(low)]
gi|284930290|gb|ADC30229.1| Bifunctional protein including dihydrofolate reductase and
deoxycytidylate deaminase family domains [Mycoplasma
gallisepticum str. R(high)]
gi|284931057|gb|ADC30995.1| Bifunctional protein including dihydrofolate reductase and
deoxycytidylate deaminase family domains [Mycoplasma
gallisepticum str. F]
gi|400272222|gb|AFP75685.1| Bifunctional protein including dihydrofolate reductase and
deoxycytidylate deaminase family domains [Mycoplasma
gallisepticum VA94_7994-1-7P]
gi|400272990|gb|AFP76452.1| Bifunctional protein including dihydrofolate reductase and
deoxycytidylate deaminase family domains [Mycoplasma
gallisepticum NC95_13295-2-2P]
gi|400273745|gb|AFP77206.1| Bifunctional protein including dihydrofolate reductase and
deoxycytidylate deaminase family domains [Mycoplasma
gallisepticum NC96_1596-4-2P]
gi|400274517|gb|AFP77977.1| Bifunctional protein including dihydrofolate reductase and
deoxycytidylate deaminase family domains [Mycoplasma
gallisepticum NY01_2001.047-5-1P]
gi|400275278|gb|AFP78737.1| Bifunctional protein including dihydrofolate reductase and
deoxycytidylate deaminase family domains [Mycoplasma
gallisepticum WI01_2001.043-13-2P]
gi|400276025|gb|AFP79483.1| Bifunctional protein including dihydrofolate reductase and
deoxycytidylate deaminase family domains [Mycoplasma
gallisepticum NC06_2006.080-5-2P]
gi|400276770|gb|AFP80227.1| Bifunctional protein including dihydrofolate reductase and
deoxycytidylate deaminase family domains [Mycoplasma
gallisepticum CA06_2006.052-5-2P]
gi|400277534|gb|AFP80990.1| Bifunctional protein including dihydrofolate reductase and
deoxycytidylate deaminase family domains [Mycoplasma
gallisepticum NC08_2008.031-4-3P]
Length = 317
Score = 122 bits (306), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 62/121 (51%), Positives = 81/121 (66%), Gaps = 7/121 (5%)
Query: 87 DVLEWHEYFMASAFLVAKRSKDPVTRVGAVIVNEDNKIVGTGYNGMPIGCSDDEFPWDKN 146
+V+ W EYFM A + A RSKDP T+VGA IVN+ ++G GYNGMP G D+ FPWD+
Sbjct: 164 NVISWDEYFMMLANVSAMRSKDPSTQVGACIVNKKKYVIGLGYNGMPKGL-DNIFPWDRT 222
Query: 147 THDELD-----MCHAEMNAILNKNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIYMCD 201
D + HAE+NAILN ++ + C LYT+LFPC+ CAK I+QSGI EV+Y +
Sbjct: 223 NQDSAKTKYPYVVHAEINAILNTSTV-IEDCTLYTNLFPCSNCAKTIVQSGIVEVVYEDN 281
Query: 202 K 202
K
Sbjct: 282 K 282
Score = 57.4 bits (137), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 27/64 (42%), Positives = 42/64 (65%), Gaps = 1/64 (1%)
Query: 1 MNAILNKNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIYMCDKHKQKPATIASKRMFD 60
+NAILN ++ + C LYT+LFPC+ CAK I+QSGI EV+Y +K++ P S +
Sbjct: 239 INAILNTSTV-IEDCTLYTNLFPCSNCAKTIVQSGIVEVVYEDNKYEHLPDNKISTHILK 297
Query: 61 AAKV 64
++ +
Sbjct: 298 SSNI 301
>gi|218189111|gb|EEC71538.1| hypothetical protein OsI_03859 [Oryza sativa Indica Group]
Length = 272
Score = 122 bits (306), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 67/155 (43%), Positives = 90/155 (58%), Gaps = 32/155 (20%)
Query: 81 PHKRVDDVLEWHEYFMASAFLVAKRSKDP----------------------VTRVG--AV 116
P KR + + W +YFMA AFL AKRSKDP + +G
Sbjct: 67 PAKR-EGYISWDDYFMAIAFLSAKRSKDPNRQTIRHDFLSTFCQPYIPEWQILPLGLEPC 125
Query: 117 IVNEDNKIVGTGYNGMPIGCSDDEFPWDKNTH--DELD-----MCHAEMNAILNKNSADT 169
+V+++ I+G GYNG P GCSD++ PW K + D L+ + HAE+NAILN N A
Sbjct: 126 LVSQEGIILGIGYNGFPRGCSDNKLPWAKKSAKGDPLETKYPYVVHAEVNAILNTNHASA 185
Query: 170 KRCKLYTSLFPCNECAKVIIQSGIKEVIYMCDKQM 204
KLY ++FPCNECAK+IIQSG+ EVIY +K++
Sbjct: 186 AGQKLYVTMFPCNECAKIIIQSGVSEVIYFVEKRI 220
Score = 65.5 bits (158), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 36/90 (40%), Positives = 49/90 (54%), Gaps = 9/90 (10%)
Query: 1 MNAILNKNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIYMCDKH--KQKPATIASKRM 58
+NAILN N A KLY ++FPCNECAK+IIQSG+ EVIY +K +AS ++
Sbjct: 174 VNAILNTNHASAAGQKLYVTMFPCNECAKIIIQSGVSEVIYFVEKRIDNSDYVYVASHKL 233
Query: 59 FDAAKVHYWSEMDKMNGV-------QNGSP 81
A V +M+ + +NG P
Sbjct: 234 LSMAGVKVRKHQPQMSQIPIKFQEPRNGEP 263
>gi|50365203|ref|YP_053628.1| deoxycytidylate deaminase [Mesoplasma florum L1]
gi|50363759|gb|AAT75744.1| deoxycytidylate deaminase [Mesoplasma florum L1]
Length = 157
Score = 122 bits (306), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 59/122 (48%), Positives = 84/122 (68%), Gaps = 7/122 (5%)
Query: 86 DDVLEWHEYFMASAFLVAKRSKDPVTRVGAVIVNEDNKIVGTGYNGMPIGCSDDEFPWDK 145
++ L W ++FM A + A RSKDP T+VGA++VN N+I+ TGYNG P G +DDEFPW +
Sbjct: 4 ENFLNWEQFFMTVAKVCAMRSKDPSTQVGAILVNNLNQIISTGYNGFPRGVNDDEFPWTR 63
Query: 146 NTHDELD-----MCHAEMNAILNKNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIYMC 200
+ +D + HAE+NAI++ + T +Y +LFPCNEC K+IIQ+GIK+V Y+
Sbjct: 64 E-GEWIDTKYPYVAHAELNAIVSARTNLTD-SDVYVTLFPCNECTKIIIQAGIKKVYYLE 121
Query: 201 DK 202
DK
Sbjct: 122 DK 123
Score = 70.1 bits (170), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 34/66 (51%), Positives = 46/66 (69%), Gaps = 1/66 (1%)
Query: 1 MNAILNKNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIYMCDKHKQKPATIASKRMFD 60
+NAI++ + T +Y +LFPCNEC K+IIQ+GIK+V Y+ DK+K ASKRM D
Sbjct: 80 LNAIVSARTNLTD-SDVYVTLFPCNECTKIIIQAGIKKVYYLEDKYKDSNEVKASKRMLD 138
Query: 61 AAKVHY 66
AAK+ Y
Sbjct: 139 AAKIEY 144
>gi|342211031|ref|ZP_08703770.1| deoxycytidylate deaminase protein [Mycoplasma anatis 1340]
gi|341578619|gb|EGS28987.1| deoxycytidylate deaminase protein [Mycoplasma anatis 1340]
Length = 164
Score = 122 bits (305), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 64/122 (52%), Positives = 80/122 (65%), Gaps = 7/122 (5%)
Query: 86 DDVLEWHEYFMASAFLVAKRSKDPVTRVGAVIVNEDNKIVGTGYNGMPIGCSDDEFPWDK 145
D+VL W YFMA A + A RSKDP T+VGA I+N + ++V GYNGMP G DDEFPW++
Sbjct: 4 DNVLNWDGYFMALAKVSAMRSKDPSTKVGACIINNEKRVVALGYNGMPKGL-DDEFPWNR 62
Query: 146 NTHDELD-----MCHAEMNAILNKNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIYMC 200
+ + HAEMNAILN + C +YT+LFPC+ CAK + QSGI EVIY
Sbjct: 63 EGISPKETKYPYVVHAEMNAILNA-YQKFENCLIYTTLFPCSSCAKTLAQSGIIEVIYEQ 121
Query: 201 DK 202
DK
Sbjct: 122 DK 123
Score = 52.8 bits (125), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 30/57 (52%), Positives = 36/57 (63%), Gaps = 2/57 (3%)
Query: 1 MNAILNKNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIYMCDK-HKQKPATIASK 56
MNAILN + C +YT+LFPC+ CAK + QSGI EVIY DK H + IA K
Sbjct: 80 MNAILNA-YQKFENCLIYTTLFPCSSCAKTLAQSGIIEVIYEQDKYHNTEDGWIARK 135
>gi|15828749|ref|NP_326109.1| deoxycytidylate deaminase [Mycoplasma pulmonis UAB CTIP]
gi|14089691|emb|CAC13451.1| DEOXYCYTIDYLATE DEAMINASE (DCMP DEAMINASE) [Mycoplasma pulmonis]
Length = 154
Score = 121 bits (304), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 58/121 (47%), Positives = 82/121 (67%), Gaps = 8/121 (6%)
Query: 86 DDVLEWHEYFMASAFLVAKRSKDPVTRVGAVIVNEDNKIVGTGYNGMPIGCSDDEFPWDK 145
+ +++W EYFM A + + RSKDP TRVGA I+N+ +++ GYNGMP+G +D FPW K
Sbjct: 4 EKIIDWDEYFMLLAKVSSLRSKDPNTRVGACIINDKKRVIALGYNGMPLG--NDFFPWSK 61
Query: 146 NTHDELD-----MCHAEMNAILNKNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIYMC 200
+ +E D + HAE+NAILN + + LYT+LFPC+ CAK I Q+GIKE++Y
Sbjct: 62 DAENEKDKKYAYVIHAELNAILNTTTL-LENAVLYTTLFPCSNCAKTITQTGIKEIVYEQ 120
Query: 201 D 201
D
Sbjct: 121 D 121
Score = 53.1 bits (126), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 25/64 (39%), Positives = 39/64 (60%), Gaps = 1/64 (1%)
Query: 1 MNAILNKNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIYMCDKHKQKPATIASKRMFD 60
+NAILN + + LYT+LFPC+ CAK I Q+GIKE++Y D + S+++F
Sbjct: 79 LNAILNTTTL-LENAVLYTTLFPCSNCAKTITQTGIKEIVYEQDFYHDTEDAWISRKIFK 137
Query: 61 AAKV 64
+ +
Sbjct: 138 ESSI 141
>gi|210633850|ref|ZP_03297865.1| hypothetical protein COLSTE_01782 [Collinsella stercoris DSM 13279]
gi|210159019|gb|EEA89990.1| cytidine and deoxycytidylate deaminase zinc-binding region
[Collinsella stercoris DSM 13279]
Length = 156
Score = 121 bits (304), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 61/128 (47%), Positives = 85/128 (66%), Gaps = 7/128 (5%)
Query: 81 PHKRVDDVLEWHEYFMASAFLVAKRSKDPVTRVGAVIVNEDNKIVGTGYNGMPIGCSDDE 140
P KR +DV+ W E+FM +A + RSKDP T+VGA I + +N+I+ GYNG P +DD+
Sbjct: 2 PGKR-EDVISWDEFFMRAAVAASLRSKDPNTQVGACIADTNNRILSVGYNGTPSALNDDD 60
Query: 141 FPW---DKNTHDELD-MCHAEMNAILNKNSA--DTKRCKLYTSLFPCNECAKVIIQSGIK 194
FPW D HD+ + + HAE NAILN + D +Y +LFPC+ECAK ++Q+GI
Sbjct: 61 FPWGTADDPLHDKHNYVIHAEANAILNYRGSLKDMAGATVYVTLFPCHECAKTLVQAGIG 120
Query: 195 EVIYMCDK 202
EV+Y+ DK
Sbjct: 121 EVVYLDDK 128
Score = 57.0 bits (136), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 28/67 (41%), Positives = 40/67 (59%), Gaps = 2/67 (2%)
Query: 2 NAILNKNSA--DTKRCKLYTSLFPCNECAKVIIQSGIKEVIYMCDKHKQKPATIASKRMF 59
NAILN + D +Y +LFPC+ECAK ++Q+GI EV+Y+ DK+ + SK +
Sbjct: 83 NAILNYRGSLKDMAGATVYVTLFPCHECAKTLVQAGIGEVVYLDDKYCGTEDNLISKNIL 142
Query: 60 DAAKVHY 66
D V Y
Sbjct: 143 DRCGVTY 149
>gi|268574948|ref|XP_002642453.1| Hypothetical protein CBG06863 [Caenorhabditis briggsae]
Length = 200
Score = 121 bits (303), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 58/123 (47%), Positives = 85/123 (69%), Gaps = 3/123 (2%)
Query: 83 KRVDDVLEWHEYFMASAFLVAKRSKDPVTRVGAVIVNEDNKIVGTGYNGMPIGCSDDEFP 142
++ ++ LE H+ F+ A + + RSKDP T+VG VIV+++N IV GYNG PIG DD F
Sbjct: 45 RKAENQLEKHQRFLRMAKVTSLRSKDPNTQVGCVIVDKENCIVSVGYNGFPIGVDDDVFR 104
Query: 143 WDKNTHDE---LDMCHAEMNAILNKNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIYM 199
WDK ++ L + HAEMNAI+NK A C +Y +LFPCN+CA+++IQS +K+V ++
Sbjct: 105 WDKEDPEDNKHLYVVHAEMNAIINKRCATLHDCTVYVTLFPCNKCAQMLIQSRVKKVYFL 164
Query: 200 CDK 202
D+
Sbjct: 165 EDR 167
Score = 59.7 bits (143), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 29/66 (43%), Positives = 45/66 (68%), Gaps = 2/66 (3%)
Query: 1 MNAILNKNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIYMCDKHKQKPATIASKRMFD 60
MNAI+NK A C +Y +LFPCN+CA+++IQS +K+V ++ D+ + ASK+M +
Sbjct: 123 MNAIINKRCATLHDCTVYVTLFPCNKCAQMLIQSRVKKVYFLEDRDEL--PFRASKKMLE 180
Query: 61 AAKVHY 66
AK+ Y
Sbjct: 181 HAKLPY 186
>gi|303233053|ref|ZP_07319728.1| dCMP deaminase family protein [Atopobium vaginae PB189-T1-4]
gi|302480828|gb|EFL43913.1| dCMP deaminase family protein [Atopobium vaginae PB189-T1-4]
Length = 161
Score = 120 bits (302), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 61/133 (45%), Positives = 84/133 (63%), Gaps = 10/133 (7%)
Query: 81 PHKRVDDVLEWHEYFMASAFLVAKRSKDPVTRVGAVIVNEDNKIVGTGYNGMPIGCSDDE 140
P+KR DV+ W E+FM A + A+RSKDP T+VGA + + +++I+ GYNG P G +DDE
Sbjct: 2 PYKR-SDVISWDEFFMRVAMIAAQRSKDPHTQVGACLADTNDRILSVGYNGTPSGINDDE 60
Query: 141 FPWDKNTHDELD----MCHAEMNAILNKNSA--DTKRCKLYTSLFPCNECAKVIIQSGIK 194
FPW + D + HAE NA+LN D + Y +LFPC ECAK+++Q+GI
Sbjct: 61 FPWGTSDDPLYDKHNFVIHAEANALLNYRGTLKDMQNATAYVTLFPCQECAKMLVQAGIG 120
Query: 195 EVIYMCDKQMSYK 207
EVIY Q +YK
Sbjct: 121 EVIYW---QNTYK 130
Score = 55.5 bits (132), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 26/67 (38%), Positives = 38/67 (56%), Gaps = 2/67 (2%)
Query: 2 NAILNKNSA--DTKRCKLYTSLFPCNECAKVIIQSGIKEVIYMCDKHKQKPATIASKRMF 59
NA+LN D + Y +LFPC ECAK+++Q+GI EVIY + +K ++ +F
Sbjct: 83 NALLNYRGTLKDMQNATAYVTLFPCQECAKMLVQAGIGEVIYWQNTYKDTVGAAIARSIF 142
Query: 60 DAAKVHY 66
D V Y
Sbjct: 143 DKCGVSY 149
>gi|308471917|ref|XP_003098188.1| hypothetical protein CRE_12208 [Caenorhabditis remanei]
gi|308269339|gb|EFP13292.1| hypothetical protein CRE_12208 [Caenorhabditis remanei]
Length = 194
Score = 120 bits (302), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 59/120 (49%), Positives = 83/120 (69%), Gaps = 3/120 (2%)
Query: 86 DDVLEWHEYFMASAFLVAKRSKDPVTRVGAVIVNEDNKIVGTGYNGMPIGCSDDEFPWDK 145
++ L+ H+ F+ A + + RSKDP T+VG VIV++DN IV GYNG PIG DD F WDK
Sbjct: 42 EEELQKHQRFLRMAKVTSLRSKDPNTQVGCVIVDKDNCIVSVGYNGFPIGVDDDVFRWDK 101
Query: 146 NTHDE---LDMCHAEMNAILNKNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIYMCDK 202
++ L + HAEMNAI+NK A C +Y +LFPCN+CA+++IQS +K+V Y+ D+
Sbjct: 102 EDPEDNKHLYVVHAEMNAIINKRCATLHDCIVYVTLFPCNKCAQMLIQSRVKKVYYLEDR 161
Score = 63.5 bits (153), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 32/66 (48%), Positives = 46/66 (69%), Gaps = 2/66 (3%)
Query: 1 MNAILNKNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIYMCDKHKQKPATIASKRMFD 60
MNAI+NK A C +Y +LFPCN+CA+++IQS +K+V Y+ D + + A ASK+M D
Sbjct: 117 MNAIINKRCATLHDCIVYVTLFPCNKCAQMLIQSRVKKVYYLED--RDELAFRASKKMLD 174
Query: 61 AAKVHY 66
AK+ Y
Sbjct: 175 HAKLPY 180
>gi|294877862|ref|XP_002768164.1| deoxycytidylate deaminase, putative [Perkinsus marinus ATCC 50983]
gi|239870361|gb|EER00882.1| deoxycytidylate deaminase, putative [Perkinsus marinus ATCC 50983]
Length = 365
Score = 120 bits (301), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 56/110 (50%), Positives = 71/110 (64%), Gaps = 5/110 (4%)
Query: 87 DVLEWHEYFMASAFLVAKRSKDPVTRVGAVIVNEDNKIVGTGYNGMPIGCSDDEFPW--- 143
D L+W +YFM+ AFL A RSKD +R G VIVN+ N+IV GYNGMP G +D + PW
Sbjct: 217 DYLQWDDYFMSVAFLTAMRSKDRESRGGVVIVNDQNRIVAVGYNGMPRGIADKDLPWASH 276
Query: 144 --DKNTHDELDMCHAEMNAILNKNSADTKRCKLYTSLFPCNECAKVIIQS 191
DK + MCHA +NAI+NKN + C++Y + FPC ECAK I S
Sbjct: 277 HEDKAQEKHMYMCHATINAIMNKNQHSVRDCRIYATAFPCCECAKFISPS 326
Score = 42.0 bits (97), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 17/34 (50%), Positives = 23/34 (67%)
Query: 1 MNAILNKNSADTKRCKLYTSLFPCNECAKVIIQS 34
+NAI+NKN + C++Y + FPC ECAK I S
Sbjct: 293 INAIMNKNQHSVRDCRIYATAFPCCECAKFISPS 326
>gi|229815226|ref|ZP_04445562.1| hypothetical protein COLINT_02272 [Collinsella intestinalis DSM
13280]
gi|229809236|gb|EEP45002.1| hypothetical protein COLINT_02272 [Collinsella intestinalis DSM
13280]
Length = 156
Score = 119 bits (297), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 59/128 (46%), Positives = 85/128 (66%), Gaps = 7/128 (5%)
Query: 81 PHKRVDDVLEWHEYFMASAFLVAKRSKDPVTRVGAVIVNEDNKIVGTGYNGMPIGCSDDE 140
P KR ++V+ W E+FM +A + RSKDP T+VGA I + +N+I+ GYNG P +DD+
Sbjct: 2 PGKR-ENVISWDEFFMRAAVAASLRSKDPNTQVGACIADTNNRILSVGYNGTPSALNDDD 60
Query: 141 FPW---DKNTHDELD-MCHAEMNAILNKNSA--DTKRCKLYTSLFPCNECAKVIIQSGIK 194
FPW D HD+ + + HAE NAILN + D +Y +LFPC+ECAK ++Q+G+
Sbjct: 61 FPWGTADDPLHDKHNYVIHAEANAILNYRGSLKDMAGATVYVTLFPCHECAKTLVQAGVG 120
Query: 195 EVIYMCDK 202
EV+Y+ DK
Sbjct: 121 EVVYLDDK 128
Score = 56.2 bits (134), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 26/67 (38%), Positives = 40/67 (59%), Gaps = 2/67 (2%)
Query: 2 NAILNKNSA--DTKRCKLYTSLFPCNECAKVIIQSGIKEVIYMCDKHKQKPATIASKRMF 59
NAILN + D +Y +LFPC+ECAK ++Q+G+ EV+Y+ DK+ + SK +
Sbjct: 83 NAILNYRGSLKDMAGATVYVTLFPCHECAKTLVQAGVGEVVYLDDKYCDTEDNLISKNIL 142
Query: 60 DAAKVHY 66
D + Y
Sbjct: 143 DRCGITY 149
>gi|17557019|ref|NP_498980.1| Protein ZK643.2 [Caenorhabditis elegans]
gi|267457|sp|P30648.1|DCTD_CAEEL RecName: Full=Probable deoxycytidylate deaminase; AltName:
Full=dCMP deaminase
gi|3881681|emb|CAA77473.1| Protein ZK643.2 [Caenorhabditis elegans]
Length = 197
Score = 119 bits (297), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 62/143 (43%), Positives = 89/143 (62%), Gaps = 3/143 (2%)
Query: 60 DAAKVHYWSEMDKMNGVQNGSPHKRVDDVLEWHEYFMASAFLVAKRSKDPVTRVGAVIVN 119
D+A +H E K+N + + L+ H+ F+ A + + RSKDP T+VG VIV+
Sbjct: 19 DSANLHTTLERLKININSDAKKLVDTNGDLKKHQRFLRIAKVTSLRSKDPNTQVGCVIVD 78
Query: 120 EDNKIVGTGYNGMPIGCSDDEFPWDKNTHDE---LDMCHAEMNAILNKNSADTKRCKLYT 176
+DN IV GYNG PIG DD F WDK ++ L + HAEMNAI+NK C +Y
Sbjct: 79 KDNCIVSVGYNGFPIGVDDDVFRWDKEDPEDNKHLYVVHAEMNAIINKRCTTLHDCTVYV 138
Query: 177 SLFPCNECAKVIIQSGIKEVIYM 199
+LFPCN+CA+++IQS +K+V ++
Sbjct: 139 TLFPCNKCAQMLIQSRVKKVYFL 161
Score = 60.5 bits (145), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 28/66 (42%), Positives = 46/66 (69%), Gaps = 2/66 (3%)
Query: 1 MNAILNKNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIYMCDKHKQKPATIASKRMFD 60
MNAI+NK C +Y +LFPCN+CA+++IQS +K+V ++ +++ + A ASK+M D
Sbjct: 120 MNAIINKRCTTLHDCTVYVTLFPCNKCAQMLIQSRVKKVYFL--ENRDELAFRASKKMLD 177
Query: 61 AAKVHY 66
A++ Y
Sbjct: 178 HARLPY 183
>gi|294939942|ref|XP_002782608.1| Deoxycytidylate deaminase, putative [Perkinsus marinus ATCC 50983]
gi|239894442|gb|EER14403.1| Deoxycytidylate deaminase, putative [Perkinsus marinus ATCC 50983]
Length = 130
Score = 119 bits (297), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 61/113 (53%), Positives = 77/113 (68%), Gaps = 8/113 (7%)
Query: 86 DDVLEWHEYFMASAFLVAKRSKDPVTRVGAVIVNEDNKIVGTGYNGMP-IGCSDDE--FP 142
+D L W EYFMA A + A RSKDP T+VGAVIVN D K+VG GYNG P +G D++
Sbjct: 18 EDNLAWTEYFMALAHVTAMRSKDPSTQVGAVIVNPDKKVVGIGYNGFPSMGEIDNDALLN 77
Query: 143 WDKNTHDELD-----MCHAEMNAILNKNSADTKRCKLYTSLFPCNECAKVIIQ 190
W K +D +CHAEMNAI+NKN D + C +YT+LFPC+EC K+I+Q
Sbjct: 78 WGKKGDKPIDSKYWFVCHAEMNAIMNKNQHDIRDCAIYTTLFPCHECTKLILQ 130
Score = 51.6 bits (122), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 20/33 (60%), Positives = 27/33 (81%)
Query: 1 MNAILNKNSADTKRCKLYTSLFPCNECAKVIIQ 33
MNAI+NKN D + C +YT+LFPC+EC K+I+Q
Sbjct: 98 MNAIMNKNQHDIRDCAIYTTLFPCHECTKLILQ 130
>gi|47459365|ref|YP_016227.1| deoxycytidylate deaminase competance related protein [Mycoplasma
mobile 163K]
gi|47458695|gb|AAT28016.1| deoxycytidylate deaminase competance related protein [Mycoplasma
mobile 163K]
Length = 154
Score = 118 bits (295), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 59/120 (49%), Positives = 77/120 (64%), Gaps = 6/120 (5%)
Query: 88 VLEWHEYFMASAFLVAKRSKDPVTRVGAVIVNEDNKIVGTGYNGMPIGCSDDEFPWDKNT 147
VL+WH YFMA + + A RSKDP T+VGA IV+++ ++V GYNGMP G D F W ++
Sbjct: 5 VLDWHSYFMALSKVSALRSKDPNTKVGACIVDDNKRVVSLGYNGMPRG-DDKNFSWKRDN 63
Query: 148 HDELD-----MCHAEMNAILNKNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIYMCDK 202
D + HAE+NAILN N +C LY SLFPC+ CAK+I Q GI ++ Y DK
Sbjct: 64 EKAADNKYAYVIHAEINAILNANKQIDSKCVLYVSLFPCSNCAKIIAQVGINQLYYEEDK 123
Score = 62.8 bits (151), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 30/66 (45%), Positives = 41/66 (62%)
Query: 1 MNAILNKNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIYMCDKHKQKPATIASKRMFD 60
+NAILN N +C LY SLFPC+ CAK+I Q GI ++ Y DK+ I SK++ D
Sbjct: 79 INAILNANKQIDSKCVLYVSLFPCSNCAKIIAQVGINQLYYEEDKYNGTEDDIISKKILD 138
Query: 61 AAKVHY 66
+ +V Y
Sbjct: 139 SLEVKY 144
>gi|336435787|ref|ZP_08615501.1| hypothetical protein HMPREF0988_01086 [Lachnospiraceae bacterium
1_4_56FAA]
gi|336000282|gb|EGN30434.1| hypothetical protein HMPREF0988_01086 [Lachnospiraceae bacterium
1_4_56FAA]
Length = 126
Score = 117 bits (294), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 56/107 (52%), Positives = 70/107 (65%), Gaps = 7/107 (6%)
Query: 87 DVLEWHEYFMASAFLVAKRSKDPVTRVGAVIVNEDNKIVGTGYNGMPIGCSDDEFPWDKN 146
D L W EYFM A L RSKDP T+VG IV++DNKI+ GYNG P+GCSDD FPW ++
Sbjct: 8 DYLSWDEYFMGVAMLSGMRSKDPGTQVGCCIVSQDNKILSMGYNGFPLGCSDDAFPWTRD 67
Query: 147 THDELDM-----CHAEMNAILNKNSADTK--RCKLYTSLFPCNECAK 186
D L+ H+E+NAILN + + K+Y +LFPCNECAK
Sbjct: 68 GEDPLETKYVYSTHSELNAILNYSGPGRELVGAKMYVTLFPCNECAK 114
>gi|256826526|ref|YP_003150485.1| deoxycytidylate deaminase [Cryptobacterium curtum DSM 15641]
gi|256582669|gb|ACU93803.1| deoxycytidylate deaminase [Cryptobacterium curtum DSM 15641]
Length = 156
Score = 117 bits (293), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 57/128 (44%), Positives = 84/128 (65%), Gaps = 7/128 (5%)
Query: 81 PHKRVDDVLEWHEYFMASAFLVAKRSKDPVTRVGAVIVNEDNKIVGTGYNGMPIGCSDDE 140
P KR D+V+ W ++FM A ++RSKDP T+VGA I + +++I+ GYNG P +DD+
Sbjct: 2 PDKR-DNVITWDQFFMGVAIAASQRSKDPHTQVGACIADTNHRILSVGYNGTPSALNDDD 60
Query: 141 FPW---DKNTHDELD-MCHAEMNAILNKNSA--DTKRCKLYTSLFPCNECAKVIIQSGIK 194
FPW D HD+ + HAE NA+LN + D Y +LFPC+ECAK+++Q+GI+
Sbjct: 61 FPWGASDDPLHDKHSYVVHAEANAVLNYRGSLKDMDGASAYVTLFPCHECAKILVQAGIR 120
Query: 195 EVIYMCDK 202
EV+Y +K
Sbjct: 121 EVVYQDNK 128
Score = 55.8 bits (133), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 26/67 (38%), Positives = 41/67 (61%), Gaps = 2/67 (2%)
Query: 2 NAILNKNSA--DTKRCKLYTSLFPCNECAKVIIQSGIKEVIYMCDKHKQKPATIASKRMF 59
NA+LN + D Y +LFPC+ECAK+++Q+GI+EV+Y +K++ + R+F
Sbjct: 83 NAVLNYRGSLKDMDGASAYVTLFPCHECAKILVQAGIREVVYQDNKYEGTIDNQIAMRIF 142
Query: 60 DAAKVHY 66
D V Y
Sbjct: 143 DDCGVSY 149
>gi|294155321|ref|YP_003559705.1| deoxycytidylate deaminase fusion protein [Mycoplasma crocodyli
MP145]
gi|291599901|gb|ADE19397.1| deoxycytidylate deaminase fusion protein [Mycoplasma crocodyli
MP145]
Length = 159
Score = 116 bits (291), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 58/119 (48%), Positives = 80/119 (67%), Gaps = 7/119 (5%)
Query: 89 LEWHEYFMASAFLVAKRSKDPVTRVGAVIVNEDNKIVGTGYNGMPIGCSDDEFPWDKNTH 148
+ W YF++ A + + RSKDP T+VGA I+N + K++G GYNGMP G +D +FPW ++
Sbjct: 5 INWDTYFISLAKISSLRSKDPSTQVGACIINSEKKVIGLGYNGMPNG-NDKDFPWGRDGQ 63
Query: 149 DELD-----MCHAEMNAILNKNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIYMCDK 202
+ + + HAE+NAILN + K LYT+LFPC CAKVI+Q+GI EVIY DK
Sbjct: 64 SQKETKYPYVVHAEVNAILN-TTVQPKNAILYTTLFPCINCAKVIVQAGISEVIYEDDK 121
Score = 53.9 bits (128), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 27/46 (58%), Positives = 33/46 (71%), Gaps = 1/46 (2%)
Query: 1 MNAILNKNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIYMCDKH 46
+NAILN + K LYT+LFPC CAKVI+Q+GI EVIY DK+
Sbjct: 78 VNAILN-TTVQPKNAILYTTLFPCINCAKVIVQAGISEVIYEDDKY 122
>gi|423263180|ref|YP_007013205.1| dCMP deaminase [Mycoplasma hyorhinis SK76]
gi|422035717|gb|AFX74559.1| dCMP deaminase [Mycoplasma hyorhinis SK76]
Length = 158
Score = 114 bits (284), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 60/123 (48%), Positives = 84/123 (68%), Gaps = 12/123 (9%)
Query: 89 LEWHEYFMASAFLVAKRSKDPVTRVGAVIVNEDNKIVGTGYNGMPIGCSDDEFPWDKNTH 148
+ W+EYF+A A + AKRSKDP T+VGA IV++ N+++G GYNGMP G +D +FPW K+++
Sbjct: 6 INWNEYFLALAKISAKRSKDPNTQVGACIVSKQNRVLGIGYNGMPKG-NDVDFPWSKDSN 64
Query: 149 DELD-----MCHAEMNAILNK----NSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIYM 199
+ + HAE+NAILN N+ + KLY SLFPC+ CAKVI Q+GI + +
Sbjct: 65 KASEVKYSYVIHAEINAILNSILPLNTVE--DAKLYVSLFPCSNCAKVIAQTGITTIYFD 122
Query: 200 CDK 202
DK
Sbjct: 123 DDK 125
Score = 50.8 bits (120), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 25/64 (39%), Positives = 40/64 (62%), Gaps = 2/64 (3%)
Query: 1 MNAILNKNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIYMCDKHKQKPATIASKRMFD 60
+N+IL N+ + KLY SLFPC+ CAKVI Q+GI + + DK+ + S+ +F+
Sbjct: 83 LNSILPLNTVED--AKLYVSLFPCSNCAKVIAQTGITTIYFDDDKYHHTEDSAISRFIFE 140
Query: 61 AAKV 64
+K+
Sbjct: 141 KSKI 144
>gi|304373353|ref|YP_003856562.1| deoxycytidylate deaminase [Mycoplasma hyorhinis HUB-1]
gi|304309544|gb|ADM22024.1| deoxycytidylate deaminase [Mycoplasma hyorhinis HUB-1]
Length = 162
Score = 113 bits (283), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 60/126 (47%), Positives = 85/126 (67%), Gaps = 12/126 (9%)
Query: 86 DDVLEWHEYFMASAFLVAKRSKDPVTRVGAVIVNEDNKIVGTGYNGMPIGCSDDEFPWDK 145
+ + W+EYF+A A + AKRSKDP T+VGA IV++ N+++G GYNGMP G +D +FPW K
Sbjct: 7 NKTINWNEYFLALAKISAKRSKDPNTQVGACIVSKQNRVLGIGYNGMPKG-NDVDFPWSK 65
Query: 146 NTHDELD-----MCHAEMNAILNK----NSADTKRCKLYTSLFPCNECAKVIIQSGIKEV 196
+++ + + HAE+NAILN N+ + KLY SLFPC+ CAKVI Q+GI +
Sbjct: 66 DSNKASEVKYSYVIHAEINAILNSILPLNTVED--AKLYVSLFPCSNCAKVIAQTGITTI 123
Query: 197 IYMCDK 202
+ DK
Sbjct: 124 YFDDDK 129
Score = 50.8 bits (120), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 25/64 (39%), Positives = 40/64 (62%), Gaps = 2/64 (3%)
Query: 1 MNAILNKNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIYMCDKHKQKPATIASKRMFD 60
+N+IL N+ + KLY SLFPC+ CAKVI Q+GI + + DK+ + S+ +F+
Sbjct: 87 LNSILPLNTVED--AKLYVSLFPCSNCAKVIAQTGITTIYFDDDKYHHTEDSAISRFIFE 144
Query: 61 AAKV 64
+K+
Sbjct: 145 KSKI 148
>gi|378836041|ref|YP_005205317.1| cytidine and deoxycytidylate deaminase family protein [Mycoplasma
hyorhinis GDL-1]
gi|367460826|gb|AEX14349.1| cytidine and deoxycytidylate deaminase family protein [Mycoplasma
hyorhinis GDL-1]
Length = 157
Score = 113 bits (283), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 60/126 (47%), Positives = 85/126 (67%), Gaps = 12/126 (9%)
Query: 86 DDVLEWHEYFMASAFLVAKRSKDPVTRVGAVIVNEDNKIVGTGYNGMPIGCSDDEFPWDK 145
+ + W+EYF+A A + AKRSKDP T+VGA IV++ N+++G GYNGMP G +D +FPW K
Sbjct: 7 NKTINWNEYFLALAKISAKRSKDPNTQVGACIVSKQNRVLGIGYNGMPKG-NDVDFPWSK 65
Query: 146 NTHDELD-----MCHAEMNAILNK----NSADTKRCKLYTSLFPCNECAKVIIQSGIKEV 196
+++ + + HAE+NAILN N+ + KLY SLFPC+ CAKVI Q+GI +
Sbjct: 66 DSNKASEVKYSYVIHAEINAILNSILPLNTVED--AKLYVSLFPCSNCAKVIAQTGITTI 123
Query: 197 IYMCDK 202
+ DK
Sbjct: 124 YFDDDK 129
Score = 50.1 bits (118), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 25/64 (39%), Positives = 39/64 (60%), Gaps = 2/64 (3%)
Query: 1 MNAILNKNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIYMCDKHKQKPATIASKRMFD 60
+N+IL N+ + KLY SLFPC+ CAKVI Q+GI + + DK+ + S+ +F+
Sbjct: 87 LNSILPLNTVED--AKLYVSLFPCSNCAKVIAQTGITTIYFDDDKYHHTEDSAISRFIFE 144
Query: 61 AAKV 64
K+
Sbjct: 145 KVKL 148
>gi|294882997|ref|XP_002769907.1| Deoxycytidylate deaminase, putative [Perkinsus marinus ATCC 50983]
gi|239873756|gb|EER02625.1| Deoxycytidylate deaminase, putative [Perkinsus marinus ATCC 50983]
Length = 115
Score = 113 bits (283), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 52/103 (50%), Positives = 68/103 (66%), Gaps = 5/103 (4%)
Query: 105 RSKDPVTRVGAVIVNEDNKIVGTGYNGMPIGCSDDEFPW-----DKNTHDELDMCHAEMN 159
RSKD +R G VIVN+ N+IV GYNGMP G +D + PW DK + MCHA +N
Sbjct: 2 RSKDRESRGGVVIVNDQNRIVAVGYNGMPRGIADKDLPWASHHEDKAQEKHMYMCHATIN 61
Query: 160 AILNKNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIYMCDK 202
AI+NKN + C++Y + FPC ECAK I+QSGI+ V Y+ D+
Sbjct: 62 AIMNKNQHSVRDCRIYATAFPCCECAKFIVQSGIRRVAYVADE 104
Score = 58.2 bits (139), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 23/45 (51%), Positives = 33/45 (73%)
Query: 1 MNAILNKNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIYMCDK 45
+NAI+NKN + C++Y + FPC ECAK I+QSGI+ V Y+ D+
Sbjct: 60 INAIMNKNQHSVRDCRIYATAFPCCECAKFIVQSGIRRVAYVADE 104
>gi|328943349|ref|ZP_08240814.1| competence protein comEB [Atopobium vaginae DSM 15829]
gi|327491318|gb|EGF23092.1| competence protein comEB [Atopobium vaginae DSM 15829]
Length = 165
Score = 113 bits (283), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 59/127 (46%), Positives = 80/127 (62%), Gaps = 7/127 (5%)
Query: 81 PHKRVDDVLEWHEYFMASAFLVAKRSKDPVTRVGAVIVNEDNKIVGTGYNGMPIGCSDDE 140
P KR +V+ W E+FM A A RSKDP T+VGA I + +++I+ GYNG P G +DDE
Sbjct: 10 PGKR-KNVITWDEFFMRVAAAAAMRSKDPHTQVGACIADSNDRILSVGYNGTPTGINDDE 68
Query: 141 FPWDKNTHDELD----MCHAEMNAILNKNSA--DTKRCKLYTSLFPCNECAKVIIQSGIK 194
FPW+ + D + HAE NA+LN + D + Y +LFPC ECAK+++Q+GI
Sbjct: 69 FPWESSADPLRDKHNFVIHAEANALLNYRGSLKDMQGATAYVTLFPCQECAKMLVQAGIG 128
Query: 195 EVIYMCD 201
EVIY D
Sbjct: 129 EVIYAED 135
Score = 54.7 bits (130), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 26/67 (38%), Positives = 38/67 (56%), Gaps = 2/67 (2%)
Query: 2 NAILNKNSA--DTKRCKLYTSLFPCNECAKVIIQSGIKEVIYMCDKHKQKPATIASKRMF 59
NA+LN + D + Y +LFPC ECAK+++Q+GI EVIY D +K S+ +
Sbjct: 91 NALLNYRGSLKDMQGATAYVTLFPCQECAKMLVQAGIGEVIYAEDTYKDTEGAEISRSIL 150
Query: 60 DAAKVHY 66
D + Y
Sbjct: 151 DRCGITY 157
>gi|308233564|ref|ZP_07664301.1| dCMP deaminase [Atopobium vaginae DSM 15829]
Length = 157
Score = 113 bits (282), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 59/127 (46%), Positives = 80/127 (62%), Gaps = 7/127 (5%)
Query: 81 PHKRVDDVLEWHEYFMASAFLVAKRSKDPVTRVGAVIVNEDNKIVGTGYNGMPIGCSDDE 140
P KR +V+ W E+FM A A RSKDP T+VGA I + +++I+ GYNG P G +DDE
Sbjct: 2 PGKR-KNVITWDEFFMRVAAAAAMRSKDPHTQVGACIADSNDRILSVGYNGTPTGINDDE 60
Query: 141 FPWDKNTHDELD----MCHAEMNAILNKNSA--DTKRCKLYTSLFPCNECAKVIIQSGIK 194
FPW+ + D + HAE NA+LN + D + Y +LFPC ECAK+++Q+GI
Sbjct: 61 FPWESSADPLRDKHNFVIHAEANALLNYRGSLKDMQGATAYVTLFPCQECAKMLVQAGIG 120
Query: 195 EVIYMCD 201
EVIY D
Sbjct: 121 EVIYAED 127
Score = 54.7 bits (130), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 26/67 (38%), Positives = 38/67 (56%), Gaps = 2/67 (2%)
Query: 2 NAILNKNSA--DTKRCKLYTSLFPCNECAKVIIQSGIKEVIYMCDKHKQKPATIASKRMF 59
NA+LN + D + Y +LFPC ECAK+++Q+GI EVIY D +K S+ +
Sbjct: 83 NALLNYRGSLKDMQGATAYVTLFPCQECAKMLVQAGIGEVIYAEDTYKDTEGAEISRSIL 142
Query: 60 DAAKVHY 66
D + Y
Sbjct: 143 DRCGITY 149
>gi|139438469|ref|ZP_01771985.1| Hypothetical protein COLAER_00975 [Collinsella aerofaciens ATCC
25986]
gi|133776008|gb|EBA39828.1| cytidine and deoxycytidylate deaminase zinc-binding region
[Collinsella aerofaciens ATCC 25986]
Length = 186
Score = 112 bits (280), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 55/129 (42%), Positives = 81/129 (62%), Gaps = 7/129 (5%)
Query: 80 SPHKRVDDVLEWHEYFMASAFLVAKRSKDPVTRVGAVIVNEDNKIVGTGYNGMPIGCSDD 139
S KR+D V+ W E+FM+ A +RSKDP T+VGA I N +++I+ GYNG P +DD
Sbjct: 21 SSGKRLD-VISWDEFFMSVAIAAQRRSKDPNTQVGACIANTNHRILSVGYNGTPSALNDD 79
Query: 140 EFPWDKNTHDELD----MCHAEMNAILNKNSA--DTKRCKLYTSLFPCNECAKVIIQSGI 193
FPW + D + HAE NA+LN + D + +Y +LFPC++CAK++ Q G+
Sbjct: 80 FFPWGTSDDPLQDKHNYVVHAEANAVLNYRGSLKDLEGSTVYVTLFPCHDCAKILAQVGV 139
Query: 194 KEVIYMCDK 202
EV+Y+ +K
Sbjct: 140 GEVVYLDNK 148
Score = 53.9 bits (128), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 23/67 (34%), Positives = 41/67 (61%), Gaps = 2/67 (2%)
Query: 2 NAILNKNSA--DTKRCKLYTSLFPCNECAKVIIQSGIKEVIYMCDKHKQKPATIASKRMF 59
NA+LN + D + +Y +LFPC++CAK++ Q G+ EV+Y+ +K+ S+R+
Sbjct: 103 NAVLNYRGSLKDLEGSTVYVTLFPCHDCAKILAQVGVGEVVYLDNKYADTDDGRISRRIL 162
Query: 60 DAAKVHY 66
D+ + Y
Sbjct: 163 DSCGISY 169
>gi|325180064|emb|CCA14465.1| RAC family serine/threonineprotein kinase putative [Albugo
laibachii Nc14]
Length = 1140
Score = 112 bits (280), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 59/115 (51%), Positives = 75/115 (65%), Gaps = 14/115 (12%)
Query: 74 NGVQNGSPHK-------RVDDVLEWHEYFMASAFLVAKRSKDPVTRVGAVIVNEDNKIVG 126
N ++ SPH+ + + L W++YFM+ AFL A RSKDP T+VGA IVN + KIVG
Sbjct: 62 NHIEWLSPHENSSEGVSKRKNYLNWNDYFMSVAFLSAMRSKDPSTQVGACIVNREKKIVG 121
Query: 127 TGYNGMPIGCSDDEFPW-DKNTHDEL------DMCHAEMNAILNKNSADTKRCKL 174
GYNG P GC DD+ PW KN+ D++ +CHAEMNAILNKNSAD C +
Sbjct: 122 IGYNGFPNGCDDDDLPWARKNSGDDILATKYPYVCHAEMNAILNKNSADVDGCTV 176
>gi|293364019|ref|ZP_06610755.1| cytidine and deoxycytidylate deaminase zinc-binding region
[Mycoplasma alligatoris A21JP2]
gi|292552509|gb|EFF41283.1| cytidine and deoxycytidylate deaminase zinc-binding region
[Mycoplasma alligatoris A21JP2]
Length = 158
Score = 112 bits (279), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 57/119 (47%), Positives = 81/119 (68%), Gaps = 7/119 (5%)
Query: 89 LEWHEYFMASAFLVAKRSKDPVTRVGAVIVNEDNKIVGTGYNGMPIGCSDDEFPWDKNTH 148
+ W YF++ A + A RSKDP T+VGA I+N++ K++G GYNGMP G +D +FPW +++
Sbjct: 5 INWDTYFISLAKISALRSKDPSTQVGACIINDEKKVIGLGYNGMPNG-NDIDFPWGRDSK 63
Query: 149 DELD-----MCHAEMNAILNKNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIYMCDK 202
+ + HAE+NAILN K +YT+L+PC CAKVI+QSGIKEV++ DK
Sbjct: 64 IAKETKYPYVVHAEVNAILNA-IVQPKGAIIYTTLYPCINCAKVIVQSGIKEVVFEDDK 121
Score = 52.4 bits (124), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 27/60 (45%), Positives = 39/60 (65%), Gaps = 1/60 (1%)
Query: 1 MNAILNKNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIYMCDKHKQKPATIASKRMFD 60
+NAILN K +YT+L+PC CAKVI+QSGIKEV++ DK+K ++ +F+
Sbjct: 78 VNAILNA-IVQPKGAIIYTTLYPCINCAKVIVQSGIKEVVFEDDKYKDTEDGEMARYLFE 136
>gi|301090647|ref|XP_002895529.1| deoxycytidylate deaminase [Phytophthora infestans T30-4]
gi|262097843|gb|EEY55895.1| deoxycytidylate deaminase [Phytophthora infestans T30-4]
Length = 122
Score = 112 bits (279), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 53/85 (62%), Positives = 60/85 (70%), Gaps = 7/85 (8%)
Query: 124 IVGTGYNGMPIGCSDDEFPWDKNT--HDELD-----MCHAEMNAILNKNSADTKRCKLYT 176
IVG GYNG P GC DDE PW + T + LD +CHAEMNAILNKNS D K C +Y
Sbjct: 2 IVGIGYNGFPNGCGDDELPWARETATNSPLDTKYPYVCHAEMNAILNKNSTDVKGCSIYV 61
Query: 177 SLFPCNECAKVIIQSGIKEVIYMCD 201
+LFPCNECAK+IIQSGI V+Y D
Sbjct: 62 ALFPCNECAKLIIQSGIARVVYYSD 86
Score = 81.6 bits (200), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 39/66 (59%), Positives = 46/66 (69%), Gaps = 4/66 (6%)
Query: 1 MNAILNKNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIYMCDKHKQKPATIASKRMFD 60
MNAILNKNS D K C +Y +LFPCNECAK+IIQSGI V+Y D K +AS+R+ D
Sbjct: 43 MNAILNKNSTDVKGCSIYVALFPCNECAKLIIQSGIARVVYYSDNWK----FVASRRLLD 98
Query: 61 AAKVHY 66
A V Y
Sbjct: 99 MAGVQY 104
>gi|339320133|ref|YP_004679828.1| deoxycytidylate deaminase [Candidatus Midichloria mitochondrii
IricVA]
gi|338226258|gb|AEI89142.1| deoxycytidylate deaminase [Candidatus Midichloria mitochondrii
IricVA]
Length = 172
Score = 110 bits (276), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 54/110 (49%), Positives = 73/110 (66%), Gaps = 2/110 (1%)
Query: 91 WHEYFMASAFLVAKRSKDPVTRVGAVIVNEDNKIVGTGYNGMPIGCSDDEFPWDKNTHDE 150
W EYFM A+LV+ +S+DP T+VGAVIV DN++ TGYNG+P G + E + +
Sbjct: 7 WDEYFMTMAYLVSMKSRDPSTKVGAVIVGPDNEVRATGYNGLPRGVKETEERYLNREYKY 66
Query: 151 LDMCHAEMNAILN--KNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIY 198
+ + HAE NAIL+ + TK CKLYT PC+ C+K I+Q+GI EVIY
Sbjct: 67 MAVNHAEENAILHCARIGVPTKGCKLYTPWIPCSRCSKSILQAGIIEVIY 116
Score = 47.0 bits (110), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 23/42 (54%), Positives = 29/42 (69%), Gaps = 2/42 (4%)
Query: 2 NAILN--KNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIY 41
NAIL+ + TK CKLYT PC+ C+K I+Q+GI EVIY
Sbjct: 75 NAILHCARIGVPTKGCKLYTPWIPCSRCSKSILQAGIIEVIY 116
>gi|260223396|emb|CBA33920.1| Probable deoxycytidylate deaminase [Curvibacter putative symbiont
of Hydra magnipapillata]
Length = 185
Score = 109 bits (273), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 56/120 (46%), Positives = 68/120 (56%), Gaps = 6/120 (5%)
Query: 86 DDVLEWHEYFMASAFLVAKRSKDPVTRVGAVIVNEDNKIVGTGYNGMPIGCSD-DEFPWD 144
D ++ WH FM A L A RSKD R GA IV DNKI G GYNG+P GC D DE W
Sbjct: 14 DSLIHWHSMFMGVALLAAARSKDARKRNGACIVGPDNKISGVGYNGLPRGCDDHDEHYWQ 73
Query: 145 KNTHDELD-----MCHAEMNAILNKNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIYM 199
+ D L+ + HAE NAILN S +Y + +PC C + IIQ GIK V+Y+
Sbjct: 74 DDDSDPLNSRHSYIVHAEQNAILNCTSLPLHGSTIYATQYPCPRCVQSIIQVGIKRVVYL 133
Score = 49.7 bits (117), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 27/76 (35%), Positives = 40/76 (52%), Gaps = 4/76 (5%)
Query: 2 NAILNKNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIYMCDKHKQKPATIASKRMFDA 61
NAILN S +Y + +PC C + IIQ GIK V+Y+ K Q+ AS++M
Sbjct: 93 NAILNCTSLPLHGSTIYATQYPCPRCVQSIIQVGIKRVVYLDKKAHQERVNAASEKMLAD 152
Query: 62 AKVHYWSEMDKMNGVQ 77
A V E++ + +Q
Sbjct: 153 AGV----EIESLQALQ 164
>gi|341900785|gb|EGT56720.1| hypothetical protein CAEBREN_07733 [Caenorhabditis brenneri]
Length = 141
Score = 108 bits (271), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 54/107 (50%), Positives = 74/107 (69%), Gaps = 3/107 (2%)
Query: 99 AFLVAKRSKDPVTRVGAVIVNEDNKIVGTGYNGMPIGCSDDEFPWDK---NTHDELDMCH 155
A + + RSKDP T+VG VIV+++N IV GYNG PIG DD F WDK N + L + H
Sbjct: 2 AKVTSLRSKDPNTQVGCVIVDKNNCIVSVGYNGFPIGVDDDVFRWDKEDPNDNKHLYVVH 61
Query: 156 AEMNAILNKNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIYMCDK 202
AEMNAI+NK C +Y +LFPCN+CA+++IQS +K+V ++ D+
Sbjct: 62 AEMNAIINKRCDTLHDCTVYVTLFPCNKCAQMLIQSRVKKVYFLEDR 108
Score = 59.7 bits (143), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 30/66 (45%), Positives = 44/66 (66%), Gaps = 2/66 (3%)
Query: 1 MNAILNKNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIYMCDKHKQKPATIASKRMFD 60
MNAI+NK C +Y +LFPCN+CA+++IQS +K+V ++ D+ A ASK+M D
Sbjct: 64 MNAIINKRCDTLHDCTVYVTLFPCNKCAQMLIQSRVKKVYFLEDRDDL--AFRASKKMLD 121
Query: 61 AAKVHY 66
AK+ Y
Sbjct: 122 YAKLPY 127
>gi|345485039|ref|XP_003425178.1| PREDICTED: hypothetical protein LOC100678792 [Nasonia vitripennis]
Length = 326
Score = 108 bits (270), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 68/205 (33%), Positives = 110/205 (53%), Gaps = 34/205 (16%)
Query: 1 MNAILNKNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIYMCDKHKQKPATIASKRMFD 60
+NAI+NKN K K+Y +L PC++C K+I++SGIKE+ Y ++
Sbjct: 119 LNAIVNKNHKSMKNGKIYQTLAPCDDCFKIIVKSGIKEINY----------------NYN 162
Query: 61 AAKVHYWSEMDKMNGVQNGSPHKRVDDVL------EWHEYFMASAFLVAKRSKDPVTRVG 114
K H M K+ + + K + L +W++YFM A+L + R + R G
Sbjct: 163 LPKWHVKEYMKKIITINQAAIGKICEKTLKISEQDKWNQYFMQVAYLFSYRCHNMKDRNG 222
Query: 115 AVIVNEDNKIVGTGYNGMPIGCSDDEFPWDKNTHDELDMCHAEMNAILNKNSADTKRCKL 174
A IVN DNKIVG GY+ C++D+ +++ C AE+NA N + K+
Sbjct: 223 ACIVNSDNKIVGVGYS----DCTEDK-------DLKVEYC-AELNAYKNSQLGCIENGKI 270
Query: 175 YTSLFPCNECAKVIIQSGIKEVIYM 199
Y + +PC+ECAK+I+Q GI+++ ++
Sbjct: 271 YVTSYPCHECAKIIVQCGIQKLFHL 295
Score = 94.7 bits (234), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 56/128 (43%), Positives = 77/128 (60%), Gaps = 12/128 (9%)
Query: 83 KRVDD--VLEWHEYFMASAFLVAKRSKDPVTRVGAVIVNEDNKIVGTGYNGMP------- 133
KR+ D +++ FM A LV+K S D +VGA IV EDN+IV GYN MP
Sbjct: 32 KRIGDGYIIDLDSIFMEMADLVSKYSNDSKCKVGACIVREDNEIVSFGYNHMPRFFDDKT 91
Query: 134 --IGCSDDEFP-WDKNTHDELDMCHAEMNAILNKNSADTKRCKLYTSLFPCNECAKVIIQ 190
I SD+E W++ +CHAE+NAI+NKN K K+Y +L PC++C K+I++
Sbjct: 92 KKIMDSDEESKHWEQKEVKLKYVCHAELNAIVNKNHKSMKNGKIYQTLAPCDDCFKIIVK 151
Query: 191 SGIKEVIY 198
SGIKE+ Y
Sbjct: 152 SGIKEINY 159
>gi|345313723|ref|XP_001520371.2| PREDICTED: deoxycytidylate deaminase-like, partial [Ornithorhynchus
anatinus]
Length = 126
Score = 105 bits (261), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 48/79 (60%), Positives = 58/79 (73%), Gaps = 5/79 (6%)
Query: 129 YNGMPIGCSDDEFPWDKNTHDELD-----MCHAEMNAILNKNSADTKRCKLYTSLFPCNE 183
YNGMP GCSDD P + LD +CHAE+NAI+NKNS D K C +Y +LFPCNE
Sbjct: 1 YNGMPNGCSDDLLPLRRAADSRLDTKYPYVCHAELNAIMNKNSTDVKGCSIYVALFPCNE 60
Query: 184 CAKVIIQSGIKEVIYMCDK 202
CAK+IIQ+GIK+VI+M DK
Sbjct: 61 CAKLIIQAGIKDVIFMSDK 79
Score = 87.4 bits (215), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 37/66 (56%), Positives = 50/66 (75%)
Query: 1 MNAILNKNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIYMCDKHKQKPATIASKRMFD 60
+NAI+NKNS D K C +Y +LFPCNECAK+IIQ+GIK+VI+M DK+ A++R+FD
Sbjct: 35 LNAIMNKNSTDVKGCSIYVALFPCNECAKLIIQAGIKDVIFMSDKYHDSEEATAARRLFD 94
Query: 61 AAKVHY 66
A + Y
Sbjct: 95 LAGIEY 100
>gi|402870917|ref|XP_003899441.1| PREDICTED: deoxycytidylate deaminase-like [Papio anubis]
Length = 101
Score = 102 bits (253), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 46/70 (65%), Positives = 54/70 (77%)
Query: 83 KRVDDVLEWHEYFMASAFLVAKRSKDPVTRVGAVIVNEDNKIVGTGYNGMPIGCSDDEFP 142
K+ DD LEW EYFMA AFL A+RSKDP ++VGA IVN +NKIVG GYNGMP GCSDD P
Sbjct: 18 KKRDDYLEWPEYFMAVAFLSAQRSKDPNSQVGACIVNSENKIVGIGYNGMPNGCSDDLLP 77
Query: 143 WDKNTHDELD 152
W + ++LD
Sbjct: 78 WSRTAENKLD 87
>gi|62327216|ref|YP_223954.1| deoxycytidylate deaminase [Phage phiJL001]
gi|50059534|gb|AAT69506.1| deoxycytidylate deaminase [Phage phiJL001]
Length = 244
Score = 102 bits (253), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 52/113 (46%), Positives = 69/113 (61%), Gaps = 2/113 (1%)
Query: 92 HEYFMASAFLVAKRSKDPVTRVGAVIVNEDNKIVGTGYNGMPIGCSDDEFPWDKNTHDEL 151
+Y + F +SKDP T+VGAV+V+EDN++VG GYNG P+G D + +
Sbjct: 108 RDYLKLAEFWANLKSKDPSTKVGAVVVSEDNRVVGMGYNGFPVGVEDSRERLEDRPTKYM 167
Query: 152 DMCHAEMNAILNKNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVI-YMCDKQ 203
+ HAE NAIL K LY +LFPCNECAK+IIQSGI+ V+ + D Q
Sbjct: 168 YVVHAEPNAILTA-GLQAKGGTLYCTLFPCNECAKLIIQSGIRRVVSWASDNQ 219
Score = 55.8 bits (133), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 31/64 (48%), Positives = 38/64 (59%), Gaps = 2/64 (3%)
Query: 2 NAILNKNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVI-YMCDKHKQKPATIASKRMFD 60
NAIL K LY +LFPCNECAK+IIQSGI+ V+ + D + A S+ MFD
Sbjct: 175 NAILTA-GLQAKGGTLYCTLFPCNECAKLIIQSGIRRVVSWASDNQRWDEAHQVSRIMFD 233
Query: 61 AAKV 64
A V
Sbjct: 234 EAGV 237
>gi|124262738|ref|YP_001023208.1| deoxycytidylate deaminase-like protein [Methylibium petroleiphilum
PM1]
gi|124266394|ref|YP_001020398.1| deoxycytidylate deaminase-like protein [Methylibium petroleiphilum
PM1]
gi|124259169|gb|ABM94163.1| deoxycytidylate deaminase-like protein [Methylibium petroleiphilum
PM1]
gi|124261984|gb|ABM96973.1| deoxycytidylate deaminase-like protein [Methylibium petroleiphilum
PM1]
Length = 187
Score = 101 bits (252), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 51/118 (43%), Positives = 69/118 (58%), Gaps = 6/118 (5%)
Query: 88 VLEWHEYFMASAFLVAKRSKDPVTRVGAVIVNEDNKIVGTGYNGMPIGCSDDEFPWDKNT 147
+++WH FM A L A RSKD R GA I + DNKI+G GYNG+P GC DD+ + +
Sbjct: 6 LIDWHSMFMGVAMLAAARSKDARKRNGACIASADNKILGVGYNGLPRGCDDDDPSYWADV 65
Query: 148 HDELD------MCHAEMNAILNKNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIYM 199
D+ + HAE+NAILN +YT+ FPC C + IIQ GIK V+++
Sbjct: 66 DDDPVQSRHSYIVHAEVNAILNCVVLPLTGSTIYTTQFPCPRCVQSIIQVGIKRVVFL 123
Score = 45.8 bits (107), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 25/68 (36%), Positives = 34/68 (50%)
Query: 1 MNAILNKNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIYMCDKHKQKPATIASKRMFD 60
+NAILN +YT+ FPC C + IIQ GIK V+++ K Q AS +M
Sbjct: 82 VNAILNCVVLPLTGSTIYTTQFPCPRCVQSIIQVGIKRVVFLDKKTHQVALNSASDKMLV 141
Query: 61 AAKVHYWS 68
A + S
Sbjct: 142 DAGIEVLS 149
>gi|193216732|ref|YP_001999974.1| deoxycytidylate deaminase [Mycoplasma arthritidis 158L3-1]
gi|193002055|gb|ACF07270.1| deoxycytidylate deaminase [Mycoplasma arthritidis 158L3-1]
Length = 173
Score = 101 bits (252), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 57/127 (44%), Positives = 76/127 (59%), Gaps = 16/127 (12%)
Query: 88 VLEWHEYFMASAFLVAKRSKDPVTRVGAVIVNEDNKIVGTGYNGMPIGC------SDDEF 141
V++W +YFM+ A L A RSKDP T+VGA IVN N IV GYNGMP +D +F
Sbjct: 8 VIDWDKYFMSLAKLSAMRSKDPSTKVGACIVNTKNYIVSLGYNGMPTSFNNTKINNDTQF 67
Query: 142 PWDK--NTHDELD-----MCHAEMNAILNKNSADT---KRCKLYTSLFPCNECAKVIIQS 191
PWD+ N D ++ + HAE NAI+N N + LY + PC CAK+++QS
Sbjct: 68 PWDRPSNKDDIINSKYTYVVHAEQNAIINANITSSHIEPGSTLYVTHSPCAMCAKLVVQS 127
Query: 192 GIKEVIY 198
IK+V+Y
Sbjct: 128 KIKKVVY 134
>gi|340369825|ref|XP_003383448.1| PREDICTED: hypothetical protein LOC100639558 [Amphimedon
queenslandica]
Length = 399
Score = 101 bits (252), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 81/236 (34%), Positives = 115/236 (48%), Gaps = 44/236 (18%)
Query: 1 MNAILNKNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIYMCDKHKQKPATIASK---R 57
+NAILNK K C LYT+L P ++CA+ I+ +GIK+V+Y C + K + K
Sbjct: 101 VNAILNKTKESIKGCTLYTTLHPDDDCARAIVTAGIKKVVY-CMYKRDKNLEVGMKIADV 159
Query: 58 MFDAAKV-------------HYWSEMDKMNGVQNGSPHK-----------RVDDVLE--- 90
FD V Y E+ N + G +K VD +E
Sbjct: 160 FFDIKGVKLRKLPEASLKVCEYVKEL--QNRIDVGGKNKSSEEQSGEEEPSVDRKIEPAS 217
Query: 91 WHEYFMASAFLVAKRSKDPVTR-VGAVIVNEDNKIVGTGYNGMPIGCSDDEFPWDKNTHD 149
W ++FM+ A L +R D + VGA I + DN+I+ Y+G P G D+ K HD
Sbjct: 218 WEKFFMSMAKLSQERPGDFKNKAVGACIASPDNQIMAVTYSGEPDGIEDEVKRLAKERHD 277
Query: 150 ELDM-------CHAEMNAILNKNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIY 198
L + HAE AI+ K S + LY + +PCN CAKVI++SGIKEV++
Sbjct: 278 -LTLTKIPEFYTHAEYRAIVGKPS--VRGYTLYVTSYPCNVCAKVIVESGIKEVVH 330
Score = 95.5 bits (236), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 55/129 (42%), Positives = 73/129 (56%), Gaps = 22/129 (17%)
Query: 89 LEWHEYFMASAFLVAKRSKDPVTRVGAVIVNEDN-KIVGTGYNGMPIGCSDDEFPWDKNT 147
++W EY+M A L A RSKDP T VGA IV+ +N +IVG GYN MP D+ F W +
Sbjct: 16 IDWDEYYMKIACLAALRSKDPRTPVGACIVDSENEQIVGIGYNSMP---KDENFTWKGTS 72
Query: 148 H----DELD--------------MCHAEMNAILNKNSADTKRCKLYTSLFPCNECAKVII 189
LD + HA +NAILNK K C LYT+L P ++CA+ I+
Sbjct: 73 STKKTSSLDPQENAANPELKYAYVVHAAVNAILNKTKESIKGCTLYTTLHPDDDCARAIV 132
Query: 190 QSGIKEVIY 198
+GIK+V+Y
Sbjct: 133 TAGIKKVVY 141
>gi|340383818|ref|XP_003390413.1| PREDICTED: hypothetical protein LOC100635458 [Amphimedon
queenslandica]
Length = 578
Score = 100 bits (249), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 75/226 (33%), Positives = 106/226 (46%), Gaps = 31/226 (13%)
Query: 1 MNAILNKNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIYMCDKHKQK--PATIASKRM 58
+NAILNK K C LYT+L P +CA IIQ+ IKEV+Y K K + P ++ +
Sbjct: 290 VNAILNKTRESIKGCTLYTTLHPDEDCAHAIIQAEIKEVVYCMYKRKDELDPDQKKAQVL 349
Query: 59 FDAAKVHYW-------------SEMDKM-----NGVQNGSPHKRVDDVLEWHEYFMASAF 100
F KV+Y E+ K +N + ++FM A
Sbjct: 350 FKIKKVYYRILPKDNLKDDKYVKELQKRIEQGKKKKENAEREPEPATTIPPEKFFMRMAK 409
Query: 101 LVAKRSKDPVTR-VGAVIVNEDNKIVGTGYNGMPIGCSDDEFPWDKNTHDELD------- 152
L KR D + VGA I + D +IV Y+G P G + K H L
Sbjct: 410 LSQKRPGDFQNKAVGACIASPDKQIVAVEYSGEPDGIQLEIERKAKELHPGLKTSNLSSF 469
Query: 153 MCHAEMNAILNKNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIY 198
HAE AI+ ++ + C LY + +PCN CAK+I++SGIKEV++
Sbjct: 470 FVHAEYRAIVGRS---VRGCTLYVTSYPCNVCAKMIVESGIKEVVH 512
Score = 90.9 bits (224), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 56/138 (40%), Positives = 74/138 (53%), Gaps = 11/138 (7%)
Query: 72 KMNGVQNGSPHKRVDDVLEWHEYFMASAFLVAKRSKDPVTRVGAVIVNEDN-KIVGTGYN 130
K+ +Q+ +++ +W EY+M A L A RSKDP T VG IV+ +N +IVG GYN
Sbjct: 193 KIKKIQDEVKEFKIERRRQWDEYYMKIACLAALRSKDPKTPVGTCIVDRENGQIVGIGYN 252
Query: 131 GMPIGCSDDEFPWD---------KNTHDELDMC-HAEMNAILNKNSADTKRCKLYTSLFP 180
MP + D K T + HA +NAILNK K C LYT+L P
Sbjct: 253 SMPKDLEKCKLSKDFKKSLSIIKKETIKLFSIVVHAAVNAILNKTRESIKGCTLYTTLHP 312
Query: 181 CNECAKVIIQSGIKEVIY 198
+CA IIQ+ IKEV+Y
Sbjct: 313 DEDCAHAIIQAEIKEVVY 330
Score = 58.9 bits (141), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 31/78 (39%), Positives = 45/78 (57%), Gaps = 4/78 (5%)
Query: 125 VGTGYNGMPIGCSDDEFPWDKNTHDELDMCHAEMNAILNKNSADTKRCKLYTSLFPCNEC 184
+ GY+G P G E +K TH E + HAE AI+ + C LY + +PC+ C
Sbjct: 1 MAVGYSGYPEGMELGEIEQEK-THKEY-ITHAEYKAIIG--GPIVRGCTLYVTSYPCDTC 56
Query: 185 AKVIIQSGIKEVIYMCDK 202
AK+I+QSGI E++Y D+
Sbjct: 57 AKLIVQSGISEIVYKEDQ 74
Score = 44.3 bits (103), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 16/31 (51%), Positives = 24/31 (77%)
Query: 15 CKLYTSLFPCNECAKVIIQSGIKEVIYMCDK 45
C LY + +PC+ CAK+I+QSGI E++Y D+
Sbjct: 44 CTLYVTSYPCDTCAKLIVQSGISEIVYKEDQ 74
>gi|340369823|ref|XP_003383447.1| PREDICTED: hypothetical protein LOC100639433 [Amphimedon
queenslandica]
Length = 383
Score = 100 bits (248), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 62/145 (42%), Positives = 80/145 (55%), Gaps = 25/145 (17%)
Query: 73 MNGVQNGSPHKRVDDVL---EWHEYFMASAFLVAKRSKDPVTRVGAVIVNEDN-KIVGTG 128
M G++ P VDD EW EY+M A L A RSKDP T VGA IV+ N +IVG G
Sbjct: 1 MAGIEEQPP---VDDSAKQREWDEYYMKIACLAALRSKDPRTPVGACIVDRKNGQIVGIG 57
Query: 129 YNGMPIGCSDDEFPW------------DKNTHDELD---MCHAEMNAILNKNSADTKRCK 173
YN MP D +F W D+ + E + HA +NAILNK + C
Sbjct: 58 YNSMP---KDKDFTWEGLSSTKETSFSDRQRNSEYKYAYVVHAAVNAILNKTKESIEGCT 114
Query: 174 LYTSLFPCNECAKVIIQSGIKEVIY 198
LYT+L P ++CA+ I+ +GIKEV+Y
Sbjct: 115 LYTTLHPDDDCARAIVTAGIKEVVY 139
Score = 99.0 bits (245), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 76/225 (33%), Positives = 109/225 (48%), Gaps = 33/225 (14%)
Query: 1 MNAILNKNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIYMC---DKHKQKPATIASKR 57
+NAILNK + C LYT+L P ++CA+ I+ +GIKEV+Y DK+ IA
Sbjct: 99 VNAILNKTKESIEGCTLYTTLHPDDDCARAIVTAGIKEVVYCMYKRDKNLDDGMKIADV- 157
Query: 58 MFDAAKV-----HYWSEMDKMNGVQNGSPHKRVDD---------VLEWHEYFMASAFLVA 103
+FD KV Y E+ V P K+ + ++FM A L
Sbjct: 158 IFDIKKVKNSDDKYVKELQNRIDVGKKEPVKKEPSAGRKTEPATTISQEKFFMRMAKLSQ 217
Query: 104 KRSKDPVTR-VGAVIVNEDNKIVGTGYNGMPIGCSDDEFPWDKNTHDELDM--------- 153
KR D + VGA I + + +I+ Y+G P G E K ++ +
Sbjct: 218 KRPGDFKNKAVGACIASPNKQIMAVEYSGEPEGI---EVEVKKRAEEKHSLTLTKIPEFY 274
Query: 154 CHAEMNAILNKNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIY 198
HAE AI+ + S + C LY + +PCN CAKVI++SGIKEV+Y
Sbjct: 275 THAEYRAIVGRPS--VRGCTLYVTSYPCNVCAKVIVESGIKEVVY 317
>gi|239790227|dbj|BAH71687.1| ACYPI001679 [Acyrthosiphon pisum]
Length = 100
Score = 98.6 bits (244), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 43/66 (65%), Positives = 53/66 (80%)
Query: 1 MNAILNKNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIYMCDKHKQKPATIASKRMFD 60
MNA+LNKNS D + C +Y +LFPCNECAK+IIQSGIKEV+Y+ DK+ KP IASKRMF
Sbjct: 1 MNAVLNKNSMDVRNCTIYVALFPCNECAKIIIQSGIKEVVYLSDKYSFKPEMIASKRMFK 60
Query: 61 AAKVHY 66
A+ V +
Sbjct: 61 ASGVSF 66
Score = 77.8 bits (190), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 32/45 (71%), Positives = 39/45 (86%)
Query: 158 MNAILNKNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIYMCDK 202
MNA+LNKNS D + C +Y +LFPCNECAK+IIQSGIKEV+Y+ DK
Sbjct: 1 MNAVLNKNSMDVRNCTIYVALFPCNECAKIIIQSGIKEVVYLSDK 45
>gi|390339979|ref|XP_785961.3| PREDICTED: deoxycytidylate deaminase-like [Strongylocentrotus
purpuratus]
Length = 124
Score = 98.6 bits (244), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 44/77 (57%), Positives = 55/77 (71%), Gaps = 5/77 (6%)
Query: 132 MPIGCSDDEFPWDKNTHDELD-----MCHAEMNAILNKNSADTKRCKLYTSLFPCNECAK 186
MP GCSD+ PW + D L+ +CHAEMNA++NKN A K C +Y +LFPCNEC K
Sbjct: 1 MPRGCSDEALPWQRKNDDWLETKIPYVCHAEMNAVMNKNCASVKGCTIYVALFPCNECTK 60
Query: 187 VIIQSGIKEVIYMCDKQ 203
VI+QSGIKEV+YM D +
Sbjct: 61 VIMQSGIKEVVYMSDTK 77
Score = 90.5 bits (223), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 40/76 (52%), Positives = 53/76 (69%)
Query: 1 MNAILNKNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIYMCDKHKQKPATIASKRMFD 60
MNA++NKN A K C +Y +LFPCNEC KVI+QSGIKEV+YM D KP+ +AS+R+ D
Sbjct: 32 MNAVMNKNCASVKGCTIYVALFPCNECTKVIMQSGIKEVVYMSDTKHDKPSMVASRRLLD 91
Query: 61 AAKVHYWSEMDKMNGV 76
A + Y + K + V
Sbjct: 92 AVGIPYRQHIPKQSKV 107
>gi|339262632|ref|XP_003367309.1| probable deoxycytidylate deaminase [Trichinella spiralis]
gi|316962966|gb|EFV48846.1| probable deoxycytidylate deaminase [Trichinella spiralis]
Length = 157
Score = 96.7 bits (239), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 47/118 (39%), Positives = 72/118 (61%), Gaps = 5/118 (4%)
Query: 88 VLEWHEYFMASAFLVAKRSKDPVTRVGAVIVNEDNKIVGTGYNGMPIGCSDDEFPWDKNT 147
L+ +FM A L +KRSKDPVT+VGA I N + I+ TGYNGMP+GC D+ PW K+
Sbjct: 7 TLDTESFFMGIACLSSKRSKDPVTQVGACIANSSDVIISTGYNGMPVGCDDNVLPWGKSL 66
Query: 148 HDELD-----MCHAEMNAILNKNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIYMC 200
+ L+ +CHAE+NA LN ++++ C+ ++ + K+ +SG+K + C
Sbjct: 67 PNPLETKHPFVCHAELNAFLNASTSELSGCRDKSNKWEMMASRKMFDESGVKYRPFSC 124
>gi|340369821|ref|XP_003383446.1| PREDICTED: hypothetical protein LOC100639305 [Amphimedon
queenslandica]
Length = 875
Score = 95.1 bits (235), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 56/135 (41%), Positives = 76/135 (56%), Gaps = 15/135 (11%)
Query: 76 VQNGSPHKRVDDVLEWHEYFMASAFLVAKRSKDPVTRVGAVIVNEDN-KIVGTGYNGMPI 134
+Q+ +V +W EY++ A L A RSKDP T VGA IV+ +N KIVG GYN MP
Sbjct: 254 IQDEVKEFKVKRRRQWDEYYIKIACLAALRSKDPKTPVGACIVDRENGKIVGIGYNSMP- 312
Query: 135 GCSDDEFPWD-KNTHDELDM----------CHAEMNAILNKNSADTKRCKLYTSLFPCNE 183
D EF W ++ E+++ HA +NAILNK K C LYT+L P +
Sbjct: 313 --KDKEFTWKGASSRSEINLINPKLKYAYVVHAAVNAILNKTRESIKGCTLYTTLHPDED 370
Query: 184 CAKVIIQSGIKEVIY 198
C +IQ+ +KEV+Y
Sbjct: 371 CVHAMIQAEMKEVVY 385
Score = 94.0 bits (232), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 73/224 (32%), Positives = 105/224 (46%), Gaps = 32/224 (14%)
Query: 1 MNAILNKNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIYMCDKHKQKPATIASKRMFD 60
+NAI N+ C +Y +L P +CA+ I Q+GIKEV+Y K Q+ T + M
Sbjct: 630 VNAITNRTRDKLDGCTIYVTLKPDEDCARAIQQAGIKEVVYCIYKRTQERETRNTGMMTA 689
Query: 61 AA---------KVHYWSEMDKMNG--VQNG------SPHKRVDD----VLEWHEYFMASA 99
A K S DK G V G P D+ L W ++FM A
Sbjct: 690 EAFLKSNNIELKNLGESASDKFTGNEVVKGLQSRIHEPQPNDDEPYKNALTWEDFFMEIA 749
Query: 100 FLVAKR-----SKDPVTRVGAVIVNEDNKIVGTGYNGMPIGCSDDEFPWDKNTHDELDMC 154
L +R + R GA IV+ N+++ GY+G P +D + +D+ +
Sbjct: 750 KLSRERPGLFDTAGLRLRTGACIVSPSNQVMAVGYSGYP----EDMELGEIIEYDKEYIA 805
Query: 155 HAEMNAILNKNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIY 198
HAE AI+ S + C LY + +PCN CAK+I QSGI E++Y
Sbjct: 806 HAEYKAIIGGPS--VRGCTLYVTSYPCNVCAKLIAQSGISEIVY 847
Score = 85.9 bits (211), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 54/130 (41%), Positives = 70/130 (53%), Gaps = 21/130 (16%)
Query: 90 EWHEYFMASAFLVAKRSKDPVTRVGAVIVN-EDNKIVGTGYNGMPI--GCSDDE--FPW- 143
+W EY+M A L A RSKDP T VG I + E +IVG GYN MP G S+++ FPW
Sbjct: 541 QWDEYYMKIACLAALRSKDPRTPVGVCIADTESYQIVGIGYNSMPCVKGRSNNDKIFPWK 600
Query: 144 --------------DKNTHDELDMC-HAEMNAILNKNSADTKRCKLYTSLFPCNECAKVI 188
DKNT + HA +NAI N+ C +Y +L P +CA+ I
Sbjct: 601 GLSENASKEEKNNKDKNTELKYPFAVHAAVNAITNRTRDKLDGCTIYVTLKPDEDCARAI 660
Query: 189 IQSGIKEVIY 198
Q+GIKEV+Y
Sbjct: 661 QQAGIKEVVY 670
Score = 59.3 bits (142), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 53/187 (28%), Positives = 82/187 (43%), Gaps = 22/187 (11%)
Query: 1 MNAILNKNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIY--MCDKHKQKPATIASKRM 58
+NAILNK K C LYT+L P +C +IQ+ +KEV+Y K + P ++ +
Sbjct: 345 VNAILNKTRESIKGCTLYTTLHPDEDCVHAMIQAEMKEVVYCMYTRKDELDPDQKKAQVI 404
Query: 59 FDAAKVH-------------YWSEMDKM--NGVQNGSPHKRVDD---VLEWHEYFMASAF 100
F+ K+ Y E+ + G + G +R + + ++FM A
Sbjct: 405 FEIKKIQHRELPNDDFKDDKYVKELQRRIEQGKKEGENAEREPEPATAIPLEKFFMRMAK 464
Query: 101 LVAKRSKDPVTR-VGAVIVNEDNKIVGTGYNGMPIGCSDDEFPWDKNTHDELDMC-HAEM 158
L KR D + VGA I + +IV Y+G G + K H LD AE+
Sbjct: 465 LSQKRPGDFQNKAVGACIATPNKQIVAVEYSGESEGIQLEIERKAKELHQGLDTIKEAEV 524
Query: 159 NAILNKN 165
IL++
Sbjct: 525 KEILDET 531
Score = 50.1 bits (118), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 28/74 (37%), Positives = 39/74 (52%), Gaps = 11/74 (14%)
Query: 132 MPIGCSDDEFPWDKNTHDELD-------MCHAEMNAILNKNSADTKRCKLYTSLFPCNEC 184
M +G S +P D D L + HAE AI+ + C LY + +PCN C
Sbjct: 1 MAVGYSG--YPEDMKLQDILQEEDQRGYIAHAEYKAIIG--GPIVRGCTLYVTSYPCNVC 56
Query: 185 AKVIIQSGIKEVIY 198
AK+I+QSGI E++Y
Sbjct: 57 AKLIVQSGISEIVY 70
Score = 44.7 bits (104), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 16/27 (59%), Positives = 22/27 (81%)
Query: 15 CKLYTSLFPCNECAKVIIQSGIKEVIY 41
C LY + +PCN CAK+I+QSGI E++Y
Sbjct: 44 CTLYVTSYPCNVCAKLIVQSGISEIVY 70
>gi|118197658|ref|YP_874051.1| deoxycytidylate deaminase [Thermus phage phiYS40]
gi|116266349|gb|ABJ91432.1| deoxycytidylate deaminase [Thermus phage phiYS40]
gi|341865145|dbj|BAK53556.1| deoxycytidylate deaminase [Thermus phage phiYS40]
Length = 142
Score = 95.1 bits (235), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 52/109 (47%), Positives = 67/109 (61%), Gaps = 2/109 (1%)
Query: 90 EWHEYFMASAFLVAKRSKDPVTRVGAVIVNEDNKIVGTGYNGMPIGCSDDEFPWDKNTHD 149
+WH+ F+ A +A+ SKDP T+VGAVIV+ + +IV GYNG P D E +
Sbjct: 3 KWHKRFIELAKTIAQYSKDPRTKVGAVIVDNERRIVSMGYNGFPRKVLDLEERLNNRKEK 62
Query: 150 ELDMCHAEMNAILNKNSADTKRCKLYT-SLFPCNECAKVIIQSGIKEVI 197
+ HAE+NAILN D + +Y FPCNECAK IIQSGIK+VI
Sbjct: 63 LKYVVHAELNAILNAKR-DIEGTTIYVYPYFPCNECAKAIIQSGIKKVI 110
Score = 47.8 bits (112), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 32/67 (47%), Positives = 41/67 (61%), Gaps = 5/67 (7%)
Query: 1 MNAILNKNSADTKRCKLYT-SLFPCNECAKVIIQSGIKEVIY--MCDKHKQKPATIASKR 57
+NAILN D + +Y FPCNECAK IIQSGIK+VI + D + K + ASK
Sbjct: 71 LNAILNAKR-DIEGTTIYVYPYFPCNECAKAIIQSGIKKVITTGIVDDN-WKESVEASKN 128
Query: 58 MFDAAKV 64
MF+ A +
Sbjct: 129 MFNEAGI 135
>gi|340383816|ref|XP_003390412.1| PREDICTED: hypothetical protein LOC100635330 [Amphimedon
queenslandica]
Length = 400
Score = 94.4 bits (233), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 61/158 (38%), Positives = 88/158 (55%), Gaps = 18/158 (11%)
Query: 56 KRMFDAAKVHYWSEMDKMNGVQNGSPHKRVDDVLEWHEYFMASAFLVAKRSKDPVTRVGA 115
K + +A K +EM+ M Q+ + +++ + +W EY+M A L A RSKDP T VGA
Sbjct: 155 KELLEAVKSLTENEMEIM---QDQAKSIKLERIRQWEEYYMNIACLAALRSKDPSTPVGA 211
Query: 116 VIVN-EDNKIVGTGYNGMPI---GCSDDEFPW---DKNTHDELD--------MCHAEMNA 160
IV+ E +IVG GYN MP G +D F W +K T D+ + + HA +NA
Sbjct: 212 CIVDTESYQIVGIGYNSMPYVKGGHNDKIFKWKGSEKTTPDKDEDSTLKYPFVVHAAVNA 271
Query: 161 ILNKNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIY 198
I N+ C LYT++ P +CA+ I +GIKEV+Y
Sbjct: 272 ITNRTRDKLDGCILYTTIHPDEDCARAIQVAGIKEVVY 309
Score = 47.8 bits (112), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 34/131 (25%), Positives = 58/131 (44%), Gaps = 25/131 (19%)
Query: 1 MNAILNKNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIYMCDKHKQKPATIA----SK 56
+NAI N+ C LYT++ P +CA+ I +GIKEV+Y K+ + S+
Sbjct: 269 VNAITNRTRDKLDGCILYTTIHPDEDCARAIQVAGIKEVVYSMFTRKEGRIMASDMERSR 328
Query: 57 RMFDAAKVHYWSEM--------------------DKMNGVQNGSPHKRVDDVLEWHEYFM 96
++F A K+ EM D G ++ P + D + W ++F+
Sbjct: 329 KIFKANKIET-REMTISNEKEPVKSLEDRIKKAKDLHKGREDTWPKEAYKDAISWEDFFI 387
Query: 97 ASAFLVAKRSK 107
A L K+++
Sbjct: 388 GIAILSKKKAR 398
>gi|343960419|ref|YP_004782245.1| deoxycytidylate deaminase [Thermus phage TMA]
gi|341865316|dbj|BAK53726.1| deoxycytidylate deaminase [Thermus phage TMA]
Length = 142
Score = 94.0 bits (232), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 51/108 (47%), Positives = 66/108 (61%), Gaps = 2/108 (1%)
Query: 91 WHEYFMASAFLVAKRSKDPVTRVGAVIVNEDNKIVGTGYNGMPIGCSDDEFPWDKNTHDE 150
WH+ F+ A +A+ SKDP T+VGAVIV+++ +IV GYNG P D + +
Sbjct: 4 WHKRFIELAKTIAQYSKDPRTKVGAVIVDDEKRIVSMGYNGFPRKVLDLDERLNNREEKL 63
Query: 151 LDMCHAEMNAILNKNSADTKRCKLYT-SLFPCNECAKVIIQSGIKEVI 197
+ HAE+NAILN D + +Y FPCNECAK IIQSGIK VI
Sbjct: 64 KYVVHAELNAILNAKR-DLEGTTIYVYPYFPCNECAKAIIQSGIKRVI 110
Score = 47.8 bits (112), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 31/66 (46%), Positives = 37/66 (56%), Gaps = 3/66 (4%)
Query: 1 MNAILNKNSADTKRCKLYT-SLFPCNECAKVIIQSGIKEVIYM-CDKHKQKPATIASKRM 58
+NAILN D + +Y FPCNECAK IIQSGIK VI K + SK+M
Sbjct: 71 LNAILNAKR-DLEGTTIYVYPYFPCNECAKAIIQSGIKRVITTGIIGENWKNSVEVSKKM 129
Query: 59 FDAAKV 64
F+ A V
Sbjct: 130 FEEAGV 135
>gi|340377281|ref|XP_003387158.1| PREDICTED: hypothetical protein LOC100632580 [Amphimedon
queenslandica]
Length = 488
Score = 92.8 bits (229), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 69/233 (29%), Positives = 108/233 (46%), Gaps = 40/233 (17%)
Query: 1 MNAILNKNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIY-MCDKHKQKPATIASKR-- 57
+NAI N+ C +YT+L+P CA+ I +GIKEV+Y M + + + KR
Sbjct: 245 VNAITNRTRDKLDDCTIYTTLYPDEGCARAIQVAGIKEVVYCMYTRKPDRKSESDMKRSE 304
Query: 58 -MFDAAKVHYWSEMDKMNGVQNGSPHKRVDDVLE-----------------------WHE 93
F A K+ E+ ++ P K++ + +E W E
Sbjct: 305 NFFIANKI----EIRELKTSNETEPEKKIKERIEQAKMLHEGPAEKLPNEAYTKAITWEE 360
Query: 94 YFMASAFLVAKRS----KDPVTRVGAVIVNEDNKIVGTGYNGMPIGCSDDEFPWDKNTHD 149
+FM A L K+ + VGA IV+ +++ GY+G P E ++ H
Sbjct: 361 FFMGIAILSTKKPGQYDRKAELAVGACIVSPCKQVMAVGYSGYPEDMELGEI--EQKDHK 418
Query: 150 ELDMCHAEMNAILNKNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIYMCDK 202
E + HAE AI+ + C LY + +PC+ CA++I+QSGI EV+Y DK
Sbjct: 419 EY-LNHAEYKAIIG--GPLVRGCTLYVTSYPCDTCARLIVQSGITEVVYDKDK 468
Score = 53.1 bits (126), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 28/58 (48%), Positives = 36/58 (62%), Gaps = 4/58 (6%)
Query: 90 EWHEYFMASAFLVAKRSKDPVTRVGAVIVNEDN-KIVGTGYNGMPI---GCSDDEFPW 143
+W EY+M A L A RSKDP T VG+ I + + +IVG GY+ MP G +D FPW
Sbjct: 83 QWDEYYMNIACLAALRSKDPSTPVGSCIADTKSYQIVGIGYSSMPYVKGGHNDKIFPW 140
Score = 45.8 bits (107), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 20/46 (43%), Positives = 29/46 (63%)
Query: 153 MCHAEMNAILNKNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIY 198
+ HA +NAI N+ C +YT+L+P CA+ I +GIKEV+Y
Sbjct: 240 VVHAAVNAITNRTRDKLDDCTIYTTLYPDEGCARAIQVAGIKEVVY 285
>gi|374287330|ref|YP_005034415.1| putative deaminase [Bacteriovorax marinus SJ]
gi|301165871|emb|CBW25444.1| putative deaminase [Bacteriovorax marinus SJ]
Length = 158
Score = 91.3 bits (225), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 48/115 (41%), Positives = 70/115 (60%), Gaps = 9/115 (7%)
Query: 96 MASAFLVAKRSKDPVTRVGAVIVNEDNKIVGTGYNGMPIGCSDDEFPWDKNTHDELD--- 152
M A + + +SKDP T+VGAV V+++N V GYNG G + + PW K+ L+
Sbjct: 1 MLQAMMASFKSKDPSTKVGAVFVDKNNHQVTMGYNGFVAGIDETKLPWGKDPKAPLEYQK 60
Query: 153 ---MCHAEMNAILN-KNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIYMCDKQ 203
+ HAE NAIL+ K+S + R Y +LFPC+ECAK++ S + EV+Y+ DK
Sbjct: 61 YGYVVHAEANAILHAKDSLEGTRA--YVTLFPCHECAKLLASSKVCEVVYLSDKH 113
Score = 57.0 bits (136), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 33/90 (36%), Positives = 56/90 (62%), Gaps = 5/90 (5%)
Query: 2 NAILN-KNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIYMCDKHKQKPATIASKRMFD 60
NAIL+ K+S + R Y +LFPC+ECAK++ S + EV+Y+ DKH + + SK++F+
Sbjct: 70 NAILHAKDSLEGTRA--YVTLFPCHECAKLLASSKVCEVVYLSDKHCETESNRISKKIFE 127
Query: 61 AAKVHYWSEMDKMNGVQNGSPHKRVDDVLE 90
A + Y +++ + + N S H+ +LE
Sbjct: 128 LAGIEY-RQLEIQDTIVN-SMHQHFQTLLE 155
>gi|452824616|gb|EME31618.1| dCMP deaminase [Galdieria sulphuraria]
Length = 322
Score = 90.5 bits (223), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 51/117 (43%), Positives = 68/117 (58%), Gaps = 10/117 (8%)
Query: 91 WHEYFMASAFLVAKRSKDPVTRVGAVIVNEDNKIVGTGYNGMPIG---CSD------DEF 141
W+ YF+ A+L A RS RVGA++V DN+IV TGYNG PIG C+D + F
Sbjct: 169 WNTYFIRIAYLAATRSNCMKRRVGALVV-RDNRIVSTGYNGTPIGTTNCNDSGCLRCNSF 227
Query: 142 PWDKNTHDELDMCHAEMNAILNKNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIY 198
+ DE HAE NAI+ K LY+++FPC CAK I+Q+GI +V+Y
Sbjct: 228 TTAGHNLDECLCLHAEENAIIEAGRERCKNATLYSNVFPCLSCAKKIVQAGISKVVY 284
Score = 52.0 bits (123), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 26/71 (36%), Positives = 40/71 (56%), Gaps = 4/71 (5%)
Query: 2 NAILNKNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIYMCDKHKQKPATIASKRMFDA 61
NAI+ K LY+++FPC CAK I+Q+GI +V+Y H + IA+K++F A
Sbjct: 245 NAIIEAGRERCKNATLYSNVFPCLSCAKKIVQAGISKVVY----HSEYSIDIAAKKLFQA 300
Query: 62 AKVHYWSEMDK 72
A + D+
Sbjct: 301 ANIEVVQIFDE 311
>gi|448926322|gb|AGE49899.1| dCMP deaminase [Paramecium bursaria Chlorella virus Can18-4]
gi|448928340|gb|AGE51911.1| dCMP deaminase [Paramecium bursaria Chlorella virus CVM-1]
Length = 144
Score = 90.5 bits (223), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 45/113 (39%), Positives = 69/113 (61%), Gaps = 3/113 (2%)
Query: 87 DVLEWHEYFMASAFLVAKRSKDPVTRVGAVIVNEDNKIVGTGYNGMPIGCSDDEFPWDKN 146
D L+ ++Y F SKDP T+V A++++ + I TG+NG+P G + W K
Sbjct: 2 DTLKANKYLQLVEFQAELFSKDPSTKVAALVLDNNQNIRSTGFNGLPRGFEETTERWSKP 61
Query: 147 THDELDMCHAEMNAILN--KNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVI 197
T + + HAE NAI + +N A C L+++LFPCNECAK+IIQ+GI +++
Sbjct: 62 TKYDY-VVHAEANAICSAARNGATLAGCTLFSTLFPCNECAKLIIQAGISKIV 113
Score = 49.3 bits (116), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 24/63 (38%), Positives = 39/63 (61%), Gaps = 6/63 (9%)
Query: 7 KNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIYMCDKHKQKPATIA----SKRMFDAA 62
+N A C L+++LFPCNECAK+IIQ+GI +++ K ++ + ++ S+ MFD
Sbjct: 80 RNGATLAGCTLFSTLFPCNECAKLIIQAGISKIV--TRKPEENSSWLSSFEKSREMFDEC 137
Query: 63 KVH 65
V
Sbjct: 138 SVE 140
>gi|340373735|ref|XP_003385395.1| PREDICTED: hypothetical protein LOC100635558 [Amphimedon
queenslandica]
Length = 480
Score = 89.0 bits (219), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 73/242 (30%), Positives = 115/242 (47%), Gaps = 48/242 (19%)
Query: 1 MNAILNKNSADTKRCKLYTSLFPCNECAKVIIQSGIKEV----IYMCDKHKQKPATIASK 56
+NAI+NK + C +YT++ P +CA IIQSGIK + + + + + P + +
Sbjct: 131 VNAIVNKTIPSLEGCTIYTTMPPARDCAHAIIQSGIKLLTTCKLVVTIINNKPPQVVKYE 190
Query: 57 RMFDAAKVHYWSE---------MDKMNGVQ--------NGSPHKRVDDVLEWHEYFMASA 99
+D K S+ M+K ++ G K +++L E FMA A
Sbjct: 191 EFYDNTKREEESDIRDAKLPCKMEKEPLIERESEKVWLTGRLQKITNEILCDDELFMAIA 250
Query: 100 FLVAKRS----KDP-----------VTRVGAVIVNEDNKIVGTGYNGMP-------IGCS 137
L A + K P V + GA IV+++ +++ G +G P IG
Sbjct: 251 KLSAMKQGHHEKFPQFTVNSNEFCKVYKQGACIVDDNKRVLSVGQSGYPEIMNKRAIG-- 308
Query: 138 DDEFPWDKNTHD-ELDMCHAEMNAILNKNSADTKRCKLYTSLFPCNECAKVIIQSGIKEV 196
+ + K +D + M HAE AIL K + + C LY + FPC+ CA+VI+QSGIK+V
Sbjct: 309 --DIQYKKLYYDGDAFMAHAEYKAILAKGTPSFRGCTLYVTKFPCHGCAQVIVQSGIKKV 366
Query: 197 IY 198
Y
Sbjct: 367 FY 368
Score = 83.6 bits (205), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 46/119 (38%), Positives = 62/119 (52%), Gaps = 13/119 (10%)
Query: 88 VLEWHEYFMASAFLVAKRSKDPVTRVGAVIVNEDNKIVGTGYNGMPIGCSDDEFPWDKNT 147
+ +W EYFM+ A L A RS+D + VGA IV+ +VG GYN MP FPW
Sbjct: 50 LYDWDEYFMSIACLAALRSEDKNSPVGACIVSPHKTVVGVGYNSMPKN-DKGNFPWKGRE 108
Query: 148 HDELD------------MCHAEMNAILNKNSADTKRCKLYTSLFPCNECAKVIIQSGIK 194
+ + HA +NAI+NK + C +YT++ P +CA IIQSGIK
Sbjct: 109 GSSFEKSRYAVDKKFLYVVHAAVNAIVNKTIPSLEGCTIYTTMPPARDCAHAIIQSGIK 167
>gi|322794640|gb|EFZ17648.1| hypothetical protein SINV_16526 [Solenopsis invicta]
Length = 72
Score = 88.6 bits (218), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 40/56 (71%), Positives = 47/56 (83%), Gaps = 3/56 (5%)
Query: 89 LEWHEYFMASAFLVAKRSKDPVTRVGAVIVNEDNKIVGTGYNGMPIGCSDDEFPWD 144
++W +YFMA+AFL AKRSKDP T+VGA IVN DN+IVGTGYNGMP GC EFPW+
Sbjct: 7 IDWDDYFMATAFLSAKRSKDPNTQVGACIVNNDNRIVGTGYNGMPNGC---EFPWN 59
>gi|340383814|ref|XP_003390411.1| PREDICTED: deoxycytidylate deaminase-like [Amphimedon
queenslandica]
Length = 148
Score = 88.2 bits (217), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 40/66 (60%), Positives = 50/66 (75%)
Query: 1 MNAILNKNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIYMCDKHKQKPATIASKRMFD 60
+NAILNKNSAD K C +Y +LFPCNECAK+IIQSGI E++ + DKH IAS+++ D
Sbjct: 56 LNAILNKNSADVKGCTIYVALFPCNECAKLIIQSGITEILNVSDKHHDTDHMIASRKLLD 115
Query: 61 AAKVHY 66
AKV Y
Sbjct: 116 MAKVKY 121
Score = 81.3 bits (199), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 35/51 (68%), Positives = 43/51 (84%)
Query: 153 MCHAEMNAILNKNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIYMCDKQ 203
+CHAE+NAILNKNSAD K C +Y +LFPCNECAK+IIQSGI E++ + DK
Sbjct: 51 VCHAELNAILNKNSADVKGCTIYVALFPCNECAKLIIQSGITEILNVSDKH 101
>gi|269114924|ref|YP_003302687.1| Deoxycytidylate deaminase [Mycoplasma hominis ATCC 23114]
gi|268322549|emb|CAX37284.1| Deoxycytidylate deaminase [Mycoplasma hominis ATCC 23114]
Length = 158
Score = 87.8 bits (216), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 52/119 (43%), Positives = 72/119 (60%), Gaps = 16/119 (13%)
Query: 96 MASAFLVAKRSKDPVTRVGAVIVNEDNKIVGTGYNGMPIGC------SDDEFPWDKNT-- 147
M+ A L A RSKDP+T+VGA IV+ DN ++ GYNGMP +DD F W++ T
Sbjct: 1 MSLAKLSALRSKDPLTKVGACIVSPDNYVISLGYNGMPTSYLNKEVNNDDLFTWNRPTTQ 60
Query: 148 HDELD-----MCHAEMNAILNKNSADTKRCK---LYTSLFPCNECAKVIIQSGIKEVIY 198
+D L+ + HAE NAI+N N ++K LY + PC CAK+I+QS I +V+Y
Sbjct: 61 NDVLNSKYTYVVHAEANAIINANITNSKIIPGSILYVTHSPCYHCAKLIVQSKISKVVY 119
Score = 38.5 bits (88), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 23/66 (34%), Positives = 34/66 (51%), Gaps = 3/66 (4%)
Query: 2 NAILNKNSADTKRCK---LYTSLFPCNECAKVIIQSGIKEVIYMCDKHKQKPATIASKRM 58
NAI+N N ++K LY + PC CAK+I+QS I +V+Y AS ++
Sbjct: 77 NAIINANITNSKIIPGSILYVTHSPCYHCAKLIVQSKISKVVYAVAYKPDSDDFKASNKI 136
Query: 59 FDAAKV 64
F A +
Sbjct: 137 FAAFNI 142
>gi|448927660|gb|AGE51233.1| dCMP deaminase [Paramecium bursaria Chlorella virus CVG-1]
Length = 144
Score = 87.4 bits (215), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 44/113 (38%), Positives = 67/113 (59%), Gaps = 3/113 (2%)
Query: 87 DVLEWHEYFMASAFLVAKRSKDPVTRVGAVIVNEDNKIVGTGYNGMPIGCSDDEFPWDKN 146
D + +Y F SKDP T+V A++++ + I TG+NG+P G + W K
Sbjct: 2 DTSKAEKYLQLVEFQAELFSKDPSTKVAALVLDNNQNIRSTGFNGLPRGFEETTKRWSKP 61
Query: 147 THDELDMCHAEMNAILN--KNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVI 197
T + + HAE NAI + +N A C L+++LFPCNECAK+IIQ+GI +++
Sbjct: 62 TKYDY-VVHAEANAICSAARNGATLAGCTLFSTLFPCNECAKLIIQAGISKIV 113
Score = 49.3 bits (116), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 24/63 (38%), Positives = 39/63 (61%), Gaps = 6/63 (9%)
Query: 7 KNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIYMCDKHKQKPATIA----SKRMFDAA 62
+N A C L+++LFPCNECAK+IIQ+GI +++ K ++ + ++ S+ MFD
Sbjct: 80 RNGATLAGCTLFSTLFPCNECAKLIIQAGISKIV--TRKPEENSSWLSSFEKSREMFDEC 137
Query: 63 KVH 65
V
Sbjct: 138 SVE 140
>gi|448925305|gb|AGE48885.1| dCMP deaminase [Paramecium bursaria Chlorella virus AP110A]
Length = 154
Score = 87.4 bits (215), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 44/113 (38%), Positives = 67/113 (59%), Gaps = 3/113 (2%)
Query: 87 DVLEWHEYFMASAFLVAKRSKDPVTRVGAVIVNEDNKIVGTGYNGMPIGCSDDEFPWDKN 146
D + +Y F SKDP T+V A++++ + I TG+NG+P G + W K
Sbjct: 12 DTSKAEKYLQLVEFQAELFSKDPSTKVAALVLDNNQNIRSTGFNGLPRGFEETTERWSKP 71
Query: 147 THDELDMCHAEMNAILN--KNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVI 197
T + + HAE NAI + +N A C L+++LFPCNECAK+IIQ+GI +++
Sbjct: 72 TKYDY-VVHAEANAICSAARNGATLAGCTLFSTLFPCNECAKLIIQAGISKIV 123
Score = 48.9 bits (115), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 24/63 (38%), Positives = 39/63 (61%), Gaps = 6/63 (9%)
Query: 7 KNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIYMCDKHKQKPATIA----SKRMFDAA 62
+N A C L+++LFPCNECAK+IIQ+GI +++ K ++ + ++ S+ MFD
Sbjct: 90 RNGATLAGCTLFSTLFPCNECAKLIIQAGISKIV--TRKPEENSSWLSSFEKSREMFDEC 147
Query: 63 KVH 65
V
Sbjct: 148 SVE 150
>gi|448934518|gb|AGE58071.1| dCMP deaminase [Paramecium bursaria Chlorella virus NW665.2]
Length = 144
Score = 87.4 bits (215), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 44/113 (38%), Positives = 67/113 (59%), Gaps = 3/113 (2%)
Query: 87 DVLEWHEYFMASAFLVAKRSKDPVTRVGAVIVNEDNKIVGTGYNGMPIGCSDDEFPWDKN 146
D + +Y F SKDP T+V A++++ + I TG+NG+P G + W K
Sbjct: 2 DTSKAEKYLQLVEFQAELFSKDPSTKVAALVLDNNQNIRSTGFNGLPRGFEETTERWSKP 61
Query: 147 THDELDMCHAEMNAILN--KNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVI 197
T + + HAE NAI + +N A C L+++LFPCNECAK+IIQ+GI +++
Sbjct: 62 TKYDY-VVHAEANAICSAARNGATLAGCTLFSTLFPCNECAKLIIQAGIAKIV 113
Score = 49.3 bits (116), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 24/63 (38%), Positives = 39/63 (61%), Gaps = 6/63 (9%)
Query: 7 KNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIYMCDKHKQKPATIA----SKRMFDAA 62
+N A C L+++LFPCNECAK+IIQ+GI +++ K ++ + ++ S+ MFD
Sbjct: 80 RNGATLAGCTLFSTLFPCNECAKLIIQAGIAKIV--TRKPEENSSWLSSFEKSREMFDEC 137
Query: 63 KVH 65
V
Sbjct: 138 SVE 140
>gi|155122216|gb|ABT14084.1| hypothetical protein MT325_M530L [Paramecium bursaria chlorella
virus MT325]
Length = 144
Score = 87.4 bits (215), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 44/113 (38%), Positives = 68/113 (60%), Gaps = 3/113 (2%)
Query: 87 DVLEWHEYFMASAFLVAKRSKDPVTRVGAVIVNEDNKIVGTGYNGMPIGCSDDEFPWDKN 146
D L+ ++Y F SKDP T+V A++++ + I TG+NG+P G + W K
Sbjct: 2 DTLKANKYLQLVEFQAELFSKDPNTKVAALVLDNNQNIRSTGFNGLPRGFEETTERWSKP 61
Query: 147 THDELDMCHAEMNAILN--KNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVI 197
+ + HAE NAI + +N A C L+++LFPCNECAK+IIQ+GI +++
Sbjct: 62 IKYDY-VVHAEANAICSAARNGATLAGCTLFSTLFPCNECAKLIIQAGISKIV 113
Score = 49.3 bits (116), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 24/63 (38%), Positives = 39/63 (61%), Gaps = 6/63 (9%)
Query: 7 KNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIYMCDKHKQKPATIA----SKRMFDAA 62
+N A C L+++LFPCNECAK+IIQ+GI +++ K ++ + ++ S+ MFD
Sbjct: 80 RNGATLAGCTLFSTLFPCNECAKLIIQAGISKIV--TRKPEENSSWLSSFEKSREMFDEC 137
Query: 63 KVH 65
V
Sbjct: 138 SVE 140
>gi|448926992|gb|AGE50567.1| dCMP deaminase [Paramecium bursaria Chlorella virus CVA-1]
gi|448928676|gb|AGE52246.1| dCMP deaminase [Paramecium bursaria Chlorella virus CVR-1]
Length = 169
Score = 86.7 bits (213), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 44/113 (38%), Positives = 67/113 (59%), Gaps = 3/113 (2%)
Query: 87 DVLEWHEYFMASAFLVAKRSKDPVTRVGAVIVNEDNKIVGTGYNGMPIGCSDDEFPWDKN 146
D + +Y F SKDP T+V A++++ + I TG+NG+P G + W K
Sbjct: 27 DTSKAEKYLRLVEFQAELFSKDPSTKVAALVLDNNQNIRSTGFNGLPRGFEETTERWSKP 86
Query: 147 THDELDMCHAEMNAILN--KNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVI 197
T + + HAE NAI + +N A C L+++LFPCNECAK+IIQ+GI +++
Sbjct: 87 TKYDY-VVHAEANAICSAARNGATLAGCTLFSTLFPCNECAKLIIQAGISKIV 138
Score = 48.9 bits (115), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 24/63 (38%), Positives = 39/63 (61%), Gaps = 6/63 (9%)
Query: 7 KNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIYMCDKHKQKPATIA----SKRMFDAA 62
+N A C L+++LFPCNECAK+IIQ+GI +++ K ++ + ++ S+ MFD
Sbjct: 105 RNGATLAGCTLFSTLFPCNECAKLIIQAGISKIV--TRKPEENSSWLSSFEKSREMFDEC 162
Query: 63 KVH 65
V
Sbjct: 163 SVE 165
>gi|126729047|ref|ZP_01744861.1| deoxycytidylate deaminase [Sagittula stellata E-37]
gi|126710037|gb|EBA09089.1| deoxycytidylate deaminase [Sagittula stellata E-37]
Length = 152
Score = 86.7 bits (213), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 44/127 (34%), Positives = 69/127 (54%), Gaps = 3/127 (2%)
Query: 82 HKRVDDVLEWHEYFMASAFLVAKRSKDPVTRVGAVIVNEDNKIVGTGYNGMPIGCSDDEF 141
H R D W +F+ A VA S+DP T+VG ++V+E ++VG GYNG P G D
Sbjct: 4 HHRAPD--WWDRFFLDMAVHVATASRDPSTKVGCILVDEQRRLVGMGYNGFPRGVVDLPE 61
Query: 142 PWDKNTHDELDMCHAEMNAILNKNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIYM-C 200
++ L + HAE NA+L S Y + PC+ CA ++IQ+G+K V+ + C
Sbjct: 62 RYEDRPTKYLMVQHAEANAVLQSPSNSLAGSTAYLTAPPCSNCAGLLIQAGVKRVVSLGC 121
Query: 201 DKQMSYK 207
+ ++ +
Sbjct: 122 NPDLALR 128
>gi|452995387|emb|CCQ92953.1| Cytidine/deoxycytidylate deaminase family protein [Clostridium
ultunense Esp]
Length = 141
Score = 85.9 bits (211), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 51/112 (45%), Positives = 65/112 (58%), Gaps = 5/112 (4%)
Query: 91 WHEYFMASAFLVAKRSKDPVTRVGAVIVNEDNKIVGTGYNGMPIGCS--DDEFPWDKNTH 148
W+EYFM A +VA RS VG +IVN+DN+IV TGYNG G DD ++ H
Sbjct: 7 WNEYFMQIAEIVATRSTCDRAEVGCLIVNDDNRIVSTGYNGSISGNPHCDDVGHTMRDGH 66
Query: 149 DELDMCHAEMNAIL--NKNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIY 198
+ HAEMNA+L K K CK+Y + FPC C K +IQ+GIK+ Y
Sbjct: 67 C-IATIHAEMNALLYCAKEGISVKDCKIYVTHFPCLNCTKALIQAGIKKFFY 117
Score = 42.4 bits (98), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 20/43 (46%), Positives = 26/43 (60%), Gaps = 2/43 (4%)
Query: 1 MNAIL--NKNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIY 41
MNA+L K K CK+Y + FPC C K +IQ+GIK+ Y
Sbjct: 75 MNALLYCAKEGISVKDCKIYVTHFPCLNCTKALIQAGIKKFFY 117
>gi|374725184|gb|EHR77264.1| Deoxycytidylate deaminase [uncultured marine group II
euryarchaeote]
Length = 149
Score = 85.9 bits (211), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 47/112 (41%), Positives = 69/112 (61%), Gaps = 4/112 (3%)
Query: 90 EWHEYFMASAFLVAKRSKDPVTRVGAVIVNEDNKIVGTGYNGMPIGCSDD-EFPWDKNTH 148
+W E F+ A ++ SKDP T+VG V+V ED +I TG+NG P G SDD + D+N
Sbjct: 4 KWDERFLDLATHISGWSKDPSTKVGCVVVGEDREIRSTGFNGFPRGISDDNDRLTDRNKK 63
Query: 149 DELDMCHAEMNAILN--KNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIY 198
L +CHAE NAI++ + K + + PC+ CA+ +IQ+GI+EV+Y
Sbjct: 64 YPL-ICHAEENAIMHAARIGVSLKGNTAFVTWPPCSRCARSLIQAGIREVVY 114
>gi|340385270|ref|XP_003391133.1| PREDICTED: deoxycytidylate deaminase-like, partial [Amphimedon
queenslandica]
Length = 78
Score = 85.9 bits (211), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 39/66 (59%), Positives = 50/66 (75%)
Query: 1 MNAILNKNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIYMCDKHKQKPATIASKRMFD 60
+NAILNKNSAD K C +Y +LFPCNECAK+IIQSGI E++ + DK+ IAS+++ D
Sbjct: 6 LNAILNKNSADVKGCTIYVALFPCNECAKLIIQSGITEILNVSDKYHDTHHMIASRKLLD 65
Query: 61 AAKVHY 66
AKV Y
Sbjct: 66 MAKVKY 71
Score = 80.9 bits (198), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 35/50 (70%), Positives = 43/50 (86%)
Query: 153 MCHAEMNAILNKNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIYMCDK 202
+CHAE+NAILNKNSAD K C +Y +LFPCNECAK+IIQSGI E++ + DK
Sbjct: 1 VCHAELNAILNKNSADVKGCTIYVALFPCNECAKLIIQSGITEILNVSDK 50
>gi|114564723|ref|YP_752237.1| zinc-binding CMP/dCMP deaminase [Shewanella frigidimarina NCIMB
400]
gi|114336016|gb|ABI73398.1| CMP/dCMP deaminase, zinc-binding [Shewanella frigidimarina NCIMB
400]
Length = 144
Score = 85.5 bits (210), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 49/107 (45%), Positives = 62/107 (57%), Gaps = 3/107 (2%)
Query: 90 EWHEYFMASAFLVAKRSKDPVTRVGAVIVNEDNKIVGTGYNGMPIGCSDDEFPWDKNTHD 149
+W F+ A LVA SKDP TRVGAVI E+N+IV G+NG P G SD D
Sbjct: 4 KWATRFLQMAELVASWSKDPSTRVGAVIT-ENNRIVSLGFNGYPHGISDSAET-DNREMK 61
Query: 150 ELDMCHAEMNAILNKNSADTKRCKLYTSLFPCNECAKVIIQSGIKEV 196
L HAE NAIL+ D C+++ + FPC CA IIQ+G++ V
Sbjct: 62 LLKTLHAEENAILHAKR-DLSSCEIWVTHFPCPNCAAKIIQTGLRAV 107
Score = 39.3 bits (90), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 27/76 (35%), Positives = 37/76 (48%), Gaps = 9/76 (11%)
Query: 2 NAILNKNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIYMCDKHKQKPATIASKRMFDA 61
NAIL+ D C+++ + FPC CA IIQ+G++ V H KP R D
Sbjct: 71 NAILHAKR-DLSSCEIWVTHFPCPNCAAKIIQTGLRAV------HSPKPNEDFLSRWGDK 123
Query: 62 AKVHYWSEMDKMNGVQ 77
KV +M + GVQ
Sbjct: 124 IKVS--QDMFEQAGVQ 137
>gi|402913900|ref|XP_003919388.1| PREDICTED: deoxycytidylate deaminase-like [Papio anubis]
Length = 157
Score = 85.5 bits (210), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 36/50 (72%), Positives = 44/50 (88%)
Query: 153 MCHAEMNAILNKNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIYMCDK 202
+CHAE+NAI+NKNS D K C +Y +LFPCNECAK+IIQ+GIKEVI+M DK
Sbjct: 61 VCHAELNAIMNKNSTDVKGCSMYVALFPCNECAKLIIQAGIKEVIFMSDK 110
Score = 85.1 bits (209), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 37/66 (56%), Positives = 49/66 (74%)
Query: 1 MNAILNKNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIYMCDKHKQKPATIASKRMFD 60
+NAI+NKNS D K C +Y +LFPCNECAK+IIQ+GIKEVI+M DK+ A++ +FD
Sbjct: 66 LNAIMNKNSTDVKGCSMYVALFPCNECAKLIIQAGIKEVIFMSDKYHDSDEATAARLLFD 125
Query: 61 AAKVHY 66
A V +
Sbjct: 126 MAGVTF 131
>gi|385858666|ref|YP_005905177.1| deoxycytidylate deaminase, partial [Mycoplasma hyorhinis MCLD]
gi|330723755|gb|AEC46125.1| deoxycytidylate deaminase [Mycoplasma hyorhinis MCLD]
Length = 93
Score = 85.5 bits (210), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 41/83 (49%), Positives = 60/83 (72%), Gaps = 6/83 (7%)
Query: 86 DDVLEWHEYFMASAFLVAKRSKDPVTRVGAVIVNEDNKIVGTGYNGMPIGCSDDEFPWDK 145
+ + W+EYF+A A + AKRSKDP T+VGA IV++ N+++G GYNGMP G +D +FPW K
Sbjct: 3 NKTINWNEYFLALAKISAKRSKDPNTQVGACIVSKQNRVLGIGYNGMPKG-NDVDFPWSK 61
Query: 146 NTHDELD-----MCHAEMNAILN 163
+++ + + HAE+NAILN
Sbjct: 62 DSNKASEVKYSYVIHAEINAILN 84
>gi|119625104|gb|EAX04699.1| dCMP deaminase, isoform CRA_b [Homo sapiens]
Length = 119
Score = 85.1 bits (209), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 36/55 (65%), Positives = 45/55 (81%)
Query: 148 HDELDMCHAEMNAILNKNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIYMCDK 202
+ +CHAE+NAI+NKNS D K C +Y +LFPCNECAK+IIQ+GIKEVI+M DK
Sbjct: 18 RSKFPVCHAELNAIMNKNSTDVKGCSMYVALFPCNECAKLIIQAGIKEVIFMSDK 72
Score = 82.4 bits (202), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 36/66 (54%), Positives = 49/66 (74%)
Query: 1 MNAILNKNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIYMCDKHKQKPATIASKRMFD 60
+NAI+NKNS D K C +Y +LFPCNECAK+IIQ+GIKEVI+M DK+ A++ +F+
Sbjct: 28 LNAIMNKNSTDVKGCSMYVALFPCNECAKLIIQAGIKEVIFMSDKYHDSDEATAARLLFN 87
Query: 61 AAKVHY 66
A V +
Sbjct: 88 MAGVTF 93
>gi|448929345|gb|AGE52913.1| dCMP deaminase [Paramecium bursaria Chlorella virus CZ-2]
gi|448929694|gb|AGE53261.1| dCMP deaminase [Paramecium bursaria Chlorella virus Fr5L]
Length = 153
Score = 85.1 bits (209), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 43/113 (38%), Positives = 67/113 (59%), Gaps = 3/113 (2%)
Query: 87 DVLEWHEYFMASAFLVAKRSKDPVTRVGAVIVNEDNKIVGTGYNGMPIGCSDDEFPWDKN 146
D + +Y + F SKD T+V A++++ + I TG+NG+P G + W K
Sbjct: 11 DTSKAEKYLQLAEFQAQLFSKDESTKVAALVLDNNQNIRSTGFNGLPRGFEETTERWSKP 70
Query: 147 THDELDMCHAEMNAILN--KNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVI 197
T + + HAE NAI + +N A C L+++LFPCNECAK+IIQ+GI +++
Sbjct: 71 TKYDY-VVHAEANAICSAARNGATLAGCTLFSTLFPCNECAKLIIQAGIAKIV 122
Score = 48.9 bits (115), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 24/63 (38%), Positives = 39/63 (61%), Gaps = 6/63 (9%)
Query: 7 KNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIYMCDKHKQKPATIA----SKRMFDAA 62
+N A C L+++LFPCNECAK+IIQ+GI +++ K ++ + ++ S+ MFD
Sbjct: 89 RNGATLAGCTLFSTLFPCNECAKLIIQAGIAKIV--TRKPEENSSWLSSFEKSREMFDEC 146
Query: 63 KVH 65
V
Sbjct: 147 SVE 149
>gi|155370644|ref|YP_001426178.1| hypothetical protein FR483_N546L [Paramecium bursaria Chlorella
virus FR483]
gi|155123964|gb|ABT15831.1| hypothetical protein FR483_N546L [Paramecium bursaria Chlorella
virus FR483]
Length = 144
Score = 84.7 bits (208), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 42/107 (39%), Positives = 65/107 (60%), Gaps = 3/107 (2%)
Query: 93 EYFMASAFLVAKRSKDPVTRVGAVIVNEDNKIVGTGYNGMPIGCSDDEFPWDKNTHDELD 152
+Y + F SKD T+V A++++ + I TG+NG+P G + W K T +
Sbjct: 8 KYLQLAEFQAQLFSKDESTKVAALVLDNNQNIRSTGFNGLPRGFEETTERWSKPTKYDY- 66
Query: 153 MCHAEMNAILN--KNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVI 197
+ HAE NAI + +N A C L+++LFPCNECAK+IIQ+GI +++
Sbjct: 67 VVHAEANAICSAARNGATLAGCTLFSTLFPCNECAKLIIQAGIAKIV 113
Score = 48.9 bits (115), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 24/62 (38%), Positives = 39/62 (62%), Gaps = 6/62 (9%)
Query: 7 KNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIYMCDKHKQKPATIA----SKRMFDAA 62
+N A C L+++LFPCNECAK+IIQ+GI +++ K ++ + ++ S+ MFD
Sbjct: 80 RNGATLAGCTLFSTLFPCNECAKLIIQAGIAKIV--TRKPEENSSWLSSFEKSREMFDEC 137
Query: 63 KV 64
V
Sbjct: 138 SV 139
>gi|194375476|dbj|BAG56683.1| unnamed protein product [Homo sapiens]
Length = 119
Score = 84.7 bits (208), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 36/49 (73%), Positives = 43/49 (87%)
Query: 154 CHAEMNAILNKNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIYMCDK 202
CHAE+NAI+NKNS D K C +Y +LFPCNECAK+IIQ+GIKEVI+M DK
Sbjct: 24 CHAELNAIMNKNSTDVKGCSMYVALFPCNECAKLIIQAGIKEVIFMSDK 72
Score = 82.4 bits (202), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 36/66 (54%), Positives = 49/66 (74%)
Query: 1 MNAILNKNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIYMCDKHKQKPATIASKRMFD 60
+NAI+NKNS D K C +Y +LFPCNECAK+IIQ+GIKEVI+M DK+ A++ +F+
Sbjct: 28 LNAIMNKNSTDVKGCSMYVALFPCNECAKLIIQAGIKEVIFMSDKYHDSDEATAARLLFN 87
Query: 61 AAKVHY 66
A V +
Sbjct: 88 MAGVTF 93
>gi|83311796|ref|YP_422060.1| deoxycytidylate deaminase [Magnetospirillum magneticum AMB-1]
gi|82946637|dbj|BAE51501.1| Deoxycytidylate deaminase [Magnetospirillum magneticum AMB-1]
Length = 140
Score = 84.7 bits (208), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 42/111 (37%), Positives = 63/111 (56%), Gaps = 3/111 (2%)
Query: 88 VLEWHEYFMASAFLVAKRSKDPVTRVGAVIVNEDNKIVGTGYNGMPIGCSDDEFPWDKNT 147
+ W++YFM A A +SKDP T+VGAV V D +I TGYNG+P G D ++
Sbjct: 2 TMAWYDYFMGFAKHAASKSKDPSTQVGAVAVGPDGEIRATGYNGLPRGVEDRPERMERPA 61
Query: 148 HDELDMCHAEMNAILN--KNSADTKRCKLYTSLFPCNECAKVIIQSGIKEV 196
L HAE N + + + K C +Y + +PC+ CA+ +IQ+G+ E+
Sbjct: 62 -KYLWTSHAEENLVAHAARVGVSLKGCTVYVTHYPCSRCARSLIQAGVAEI 111
Score = 40.0 bits (92), Expect = 0.61, Method: Compositional matrix adjust.
Identities = 19/54 (35%), Positives = 31/54 (57%), Gaps = 6/54 (11%)
Query: 13 KRCKLYTSLFPCNECAKVIIQSGIKEVIYMCDKHKQKPATIASKRMFDAAKVHY 66
K C +Y + +PC+ CA+ +IQ+G+ E I++ D PA FD A+V +
Sbjct: 85 KGCTVYVTHYPCSRCARSLIQAGVAE-IHVGDGTTSMPA-----EEFDTARVMF 132
>gi|332800033|ref|YP_004461532.1| zinc-binding CMP/dCMP deaminase [Tepidanaerobacter acetatoxydans
Re1]
gi|438003328|ref|YP_007273071.1| dCMP deaminase [Tepidanaerobacter acetatoxydans Re1]
gi|332697768|gb|AEE92225.1| CMP/dCMP deaminase zinc-binding protein [Tepidanaerobacter
acetatoxydans Re1]
gi|432180122|emb|CCP27095.1| dCMP deaminase [Tepidanaerobacter acetatoxydans Re1]
Length = 138
Score = 84.7 bits (208), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 50/119 (42%), Positives = 70/119 (58%), Gaps = 4/119 (3%)
Query: 90 EWHEYFMASAFLVAKRSKDPVTRVGAVIVNEDNKIVGTGYNGMPIGCS--DDEFPWDKNT 147
+W +YF+ AF V +RS P +VGAV+V +DN+I GTGYNG P G DD +
Sbjct: 4 DWDKYFLEIAFKVRERSTCPRLQVGAVVV-KDNRIKGTGYNGSPSGMDHCDDVGCMIRGN 62
Query: 148 HDELDMCHAEMNAILNKNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIYMCDKQMSY 206
H + HAE+NA+L + + K +Y + PC EC+K+II SGIK V+Y + Y
Sbjct: 63 HC-VRTIHAEVNALLECSPEERKGATIYVTARPCAECSKLIINSGIKRVVYAIEYPPDY 120
Score = 41.6 bits (96), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 18/41 (43%), Positives = 27/41 (65%)
Query: 1 MNAILNKNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIY 41
+NA+L + + K +Y + PC EC+K+II SGIK V+Y
Sbjct: 72 VNALLECSPEERKGATIYVTARPCAECSKLIINSGIKRVVY 112
>gi|448932654|gb|AGE56212.1| dCMP deaminase [Paramecium bursaria Chlorella virus NE-JV-1]
Length = 144
Score = 84.7 bits (208), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 43/108 (39%), Positives = 63/108 (58%), Gaps = 3/108 (2%)
Query: 92 HEYFMASAFLVAKRSKDPVTRVGAVIVNEDNKIVGTGYNGMPIGCSDDEFPWDKNTHDEL 151
+Y + F SKDP +V A++V++ I TG+NG P G + W+K +
Sbjct: 7 EKYLKLAEFQAELFSKDPKKKVAALVVDDKYNIRSTGFNGFPRGFEETTERWEKPKKYDY 66
Query: 152 DMCHAEMNAILN--KNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVI 197
+ HAE NA+ + +N A RC L T++FPCNECAK+IIQ+GI +I
Sbjct: 67 -VVHAEANAVCSAARNGASLDRCTLVTTMFPCNECAKLIIQAGISRII 113
Score = 50.4 bits (119), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 20/34 (58%), Positives = 26/34 (76%)
Query: 7 KNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVI 40
+N A RC L T++FPCNECAK+IIQ+GI +I
Sbjct: 80 RNGASLDRCTLVTTMFPCNECAKLIIQAGISRII 113
>gi|448935609|gb|AGE59159.1| dCMP deaminase [Paramecium bursaria Chlorella virus OR0704.2.2]
Length = 154
Score = 84.3 bits (207), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 42/107 (39%), Positives = 65/107 (60%), Gaps = 3/107 (2%)
Query: 93 EYFMASAFLVAKRSKDPVTRVGAVIVNEDNKIVGTGYNGMPIGCSDDEFPWDKNTHDELD 152
+Y + F SKD T+V A++++ + I TG+NG+P G + W K T +
Sbjct: 18 KYLQLAEFQAQLFSKDESTKVAALVLDNNQNIRSTGFNGLPRGFEETTERWSKPTKYDY- 76
Query: 153 MCHAEMNAILN--KNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVI 197
+ HAE NAI + +N A C L+++LFPCNECAK+IIQ+GI +++
Sbjct: 77 VVHAEANAICSAARNGATLAGCTLFSTLFPCNECAKLIIQAGIAKIV 123
Score = 48.9 bits (115), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 24/63 (38%), Positives = 39/63 (61%), Gaps = 6/63 (9%)
Query: 7 KNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIYMCDKHKQKPATIA----SKRMFDAA 62
+N A C L+++LFPCNECAK+IIQ+GI +++ K ++ + ++ S+ MFD
Sbjct: 90 RNGATLAGCTLFSTLFPCNECAKLIIQAGIAKIV--TRKPEENSSWLSSFEKSREMFDEC 147
Query: 63 KVH 65
V
Sbjct: 148 SVE 150
>gi|448927397|gb|AGE50971.1| dCMP deaminase [Paramecium bursaria Chlorella virus CVB-1]
Length = 154
Score = 84.3 bits (207), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 43/113 (38%), Positives = 66/113 (58%), Gaps = 3/113 (2%)
Query: 87 DVLEWHEYFMASAFLVAKRSKDPVTRVGAVIVNEDNKIVGTGYNGMPIGCSDDEFPWDKN 146
D + +Y F SKDP T+V A++++ + I TG+NG+P G + W K
Sbjct: 12 DTSKAEKYLRLVEFQAELFSKDPSTKVAALVLDNNQNIRSTGFNGLPRGFEETTERWSKP 71
Query: 147 THDELDMCHAEMNAILN--KNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVI 197
+ + HAE NAI + +N A C L+++LFPCNECAK+IIQ+GI +++
Sbjct: 72 IKYDY-VVHAEANAICSAARNGATLAGCTLFSTLFPCNECAKLIIQAGIDKIV 123
Score = 48.5 bits (114), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 24/62 (38%), Positives = 39/62 (62%), Gaps = 6/62 (9%)
Query: 7 KNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIYMCDKHKQKPATIA----SKRMFDAA 62
+N A C L+++LFPCNECAK+IIQ+GI +++ K ++ + ++ S+ MFD
Sbjct: 90 RNGATLAGCTLFSTLFPCNECAKLIIQAGIDKIV--TRKPEENSSWLSSFEKSREMFDEC 147
Query: 63 KV 64
V
Sbjct: 148 SV 149
>gi|383316536|ref|YP_005377378.1| deoxycytidylate deaminase [Frateuria aurantia DSM 6220]
gi|379043640|gb|AFC85696.1| deoxycytidylate deaminase [Frateuria aurantia DSM 6220]
Length = 147
Score = 84.0 bits (206), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 52/112 (46%), Positives = 67/112 (59%), Gaps = 7/112 (6%)
Query: 90 EWHEYFMASAFLVAKRSKDPVTRVGAVIVN-EDNKIVGTGYNGMPIGCSDDE-FPWDKNT 147
+W + FM A LVA SKDP T+VGAV+V+ + +IV TGYNG P DD D+
Sbjct: 4 KWDQRFMDVARLVASWSKDPSTKVGAVLVHPQQKRIVSTGYNGYPRSLEDDGGLDRDRKL 63
Query: 148 HDELDMCHAEMNAILNKNSADTKRCKLY-TSLFPCNECAKVIIQSGIKEVIY 198
+ HAEMNAIL+ T+ LY T L PC+ CA IIQ+GI+ V+Y
Sbjct: 64 SRTI---HAEMNAILHAREP-TEGLTLYVTPLPPCDRCAAHIIQAGIRRVVY 111
>gi|448930834|gb|AGE54398.1| dCMP deaminase [Paramecium bursaria Chlorella virus IL-5-2s1]
gi|448931518|gb|AGE55080.1| dCMP deaminase [Paramecium bursaria Chlorella virus MA-1D]
gi|448935346|gb|AGE58897.1| dCMP deaminase [Paramecium bursaria Chlorella virus NYs1]
Length = 142
Score = 83.6 bits (205), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 43/95 (45%), Positives = 61/95 (64%), Gaps = 5/95 (5%)
Query: 106 SKDPVTRVGAVIVNEDNKIVGTGYNGMPIGCSDDEFPWDK-NTHDELDMCHAEMNAILN- 163
SKDP +V +I++ +N I GYNGMP G + W+K N ++ + HAE NAI+
Sbjct: 19 SKDPKMKVATMIIDNNNNIASVGYNGMPRGFEETTARWEKPNKYNYV--VHAEANAIVTA 76
Query: 164 -KNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVI 197
+N C + T+LFPCNECAK+IIQ+GI++VI
Sbjct: 77 ARNGFRLDGCSIITTLFPCNECAKLIIQAGIRKVI 111
Score = 47.4 bits (111), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 22/41 (53%), Positives = 30/41 (73%), Gaps = 2/41 (4%)
Query: 2 NAILN--KNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVI 40
NAI+ +N C + T+LFPCNECAK+IIQ+GI++VI
Sbjct: 71 NAIVTAARNGFRLDGCSIITTLFPCNECAKLIIQAGIRKVI 111
>gi|157953099|ref|YP_001497991.1| hypothetical protein NY2A_B795R [Paramecium bursaria Chlorella
virus NY2A]
gi|155123326|gb|ABT15194.1| hypothetical protein NY2A_B795R [Paramecium bursaria Chlorella
virus NY2A]
Length = 142
Score = 83.6 bits (205), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 43/95 (45%), Positives = 61/95 (64%), Gaps = 5/95 (5%)
Query: 106 SKDPVTRVGAVIVNEDNKIVGTGYNGMPIGCSDDEFPWDK-NTHDELDMCHAEMNAILN- 163
SKDP +V +I++ +N I GYNGMP G + W+K N ++ + HAE NAI+
Sbjct: 19 SKDPKMKVATMIIDNNNNIASVGYNGMPRGFEETTARWEKPNKYNYV--VHAEANAIVTA 76
Query: 164 -KNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVI 197
+N C + T+LFPCNECAK+IIQ+GI++VI
Sbjct: 77 ARNGFRLDGCSIITTLFPCNECAKLIIQAGIRKVI 111
Score = 47.4 bits (111), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 22/41 (53%), Positives = 30/41 (73%), Gaps = 2/41 (4%)
Query: 2 NAILN--KNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVI 40
NAI+ +N C + T+LFPCNECAK+IIQ+GI++VI
Sbjct: 71 NAIVTAARNGFRLDGCSIITTLFPCNECAKLIIQAGIRKVI 111
>gi|452966426|gb|EME71437.1| deoxycytidylate deaminase [Magnetospirillum sp. SO-1]
Length = 143
Score = 83.6 bits (205), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 41/110 (37%), Positives = 63/110 (57%), Gaps = 3/110 (2%)
Query: 89 LEWHEYFMASAFLVAKRSKDPVTRVGAVIVNEDNKIVGTGYNGMPIGCSDDEFPWDKNTH 148
+ W++YFM A A +SKDP T+VGAV V D +I TGYNG+P G D ++
Sbjct: 6 MAWYDYFMGFAKHAASKSKDPSTQVGAVAVGPDGEIRATGYNGLPRGVEDRPERMERPA- 64
Query: 149 DELDMCHAEMNAILN--KNSADTKRCKLYTSLFPCNECAKVIIQSGIKEV 196
L HAE N + + + K C +Y + +PC+ CA+ +IQ+G+ ++
Sbjct: 65 KYLWTSHAEENLVAHAARVGVSLKGCTVYVTHYPCSRCARSLIQAGVAQI 114
Score = 40.4 bits (93), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 23/67 (34%), Positives = 37/67 (55%), Gaps = 11/67 (16%)
Query: 13 KRCKLYTSLFPCNECAKVIIQSGIKEVIYMCDKHKQKPATIASKRMFDAAKVHYWSEMDK 72
K C +Y + +PC+ CA+ +IQ+G+ + I++ D PA FD A+V M +
Sbjct: 88 KGCTVYVTHYPCSRCARSLIQAGVAQ-IHVGDGTTSMPA-----EEFDTARV-----MFE 136
Query: 73 MNGVQNG 79
+GVQ G
Sbjct: 137 ESGVQVG 143
>gi|60688555|gb|AAX30382.1| SJCHGC03167 protein [Schistosoma japonicum]
gi|226479958|emb|CAX73275.1| putative 6030466N05Rik protein [Schistosoma japonicum]
Length = 98
Score = 83.6 bits (205), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 35/58 (60%), Positives = 48/58 (82%)
Query: 146 NTHDELDMCHAEMNAILNKNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIYMCDKQ 203
N +L +CHAE+NA+LN+N A ++ C LY+++FPCNECAKVIIQ+GIKEV+Y DK+
Sbjct: 6 NISMKLVVCHAELNAVLNRNEAHSRGCTLYSTMFPCNECAKVIIQAGIKEVVYHSDKK 63
Score = 77.8 bits (190), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 33/64 (51%), Positives = 48/64 (75%)
Query: 1 MNAILNKNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIYMCDKHKQKPATIASKRMFD 60
+NA+LN+N A ++ C LY+++FPCNECAKVIIQ+GIKEV+Y DK + + A+K +F
Sbjct: 18 LNAVLNRNEAHSRGCTLYSTMFPCNECAKVIIQAGIKEVVYHSDKKNRTASNQAAKYLFK 77
Query: 61 AAKV 64
A +
Sbjct: 78 KAGI 81
>gi|304439109|ref|ZP_07399028.1| competence protein ComEB [Peptoniphilus duerdenii ATCC BAA-1640]
gi|304372468|gb|EFM26055.1| competence protein ComEB [Peptoniphilus duerdenii ATCC BAA-1640]
Length = 140
Score = 83.2 bits (204), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 48/111 (43%), Positives = 60/111 (54%), Gaps = 3/111 (2%)
Query: 91 WHEYFMASAFLVAKRSKDPVTRVGAVIVNEDNKIVGTGYNGMPIGC-SDDEFPWDKNTHD 149
W EYFM +VA RS VG ++VN+DN+IV TGYNG G S DE
Sbjct: 5 WDEYFMEITEMVATRSTCDRAFVGCILVNKDNRIVSTGYNGSLSGNKSCDEIGHTMRDGH 64
Query: 150 ELDMCHAEMNAIL--NKNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIY 198
+ HAEMNA+L K K CK Y + FPC C K ++Q+GI E+ Y
Sbjct: 65 CIATIHAEMNALLYCAKEGISVKGCKCYVTHFPCLNCTKALLQAGITEIYY 115
Score = 40.8 bits (94), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 19/43 (44%), Positives = 25/43 (58%), Gaps = 2/43 (4%)
Query: 1 MNAIL--NKNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIY 41
MNA+L K K CK Y + FPC C K ++Q+GI E+ Y
Sbjct: 73 MNALLYCAKEGISVKGCKCYVTHFPCLNCTKALLQAGITEIYY 115
>gi|340383810|ref|XP_003390409.1| PREDICTED: probable deoxycytidylate deaminase-like [Amphimedon
queenslandica]
Length = 325
Score = 83.2 bits (204), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 58/203 (28%), Positives = 92/203 (45%), Gaps = 50/203 (24%)
Query: 1 MNAILNKNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIY-MCDKHKQ---KPATIASK 56
++A+LNK + C +Y + FP +C II++GI+EV+Y M +H++ K I K
Sbjct: 135 VSAVLNKTRESIEGCTIYLTHFPDKDCVHAIIKAGIREVVYCMYTRHEEREEKEDMIVGK 194
Query: 57 RMFDAAKVHYWSEMDKMNGVQNGSPHKRVDDVLEWHEYFMASAFLVAKRSKDPVTRVGAV 116
+ + V Y +VGA
Sbjct: 195 EILERTAVKY--------------------------------------------RQVGAC 210
Query: 117 IVNEDNKIVGTGYNGMPIGCSDDEFPWDKNTHDELD-MCHAEMNAILNKNSADTKRCKLY 175
+V+ +++ GYN P DE ++ + E + + HAE AIL S + C LY
Sbjct: 211 VVSPKKQVLAVGYNAYPEDMIHDETEDEEKDNKESNYISHAEYKAILG-ISPSVEGCTLY 269
Query: 176 TSLFPCNECAKVIIQSGIKEVIY 198
+ +PC+ CA+VI+QSGI+EVIY
Sbjct: 270 VTKYPCHMCAQVIVQSGIREVIY 292
Score = 82.8 bits (203), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 47/120 (39%), Positives = 70/120 (58%), Gaps = 12/120 (10%)
Query: 91 WHEYFMASAFLVAKRSKDPVTRVGAVIVN-EDNKIVGTGYNGMPI--GCSDDE-FPWDKN 146
W EY+M A L A RSKDP T VGA I + + ++IVG GYN MP G ++D+ F W +
Sbjct: 56 WDEYYMKIACLAALRSKDPSTPVGACIADTKTHQIVGIGYNSMPYVKGRNNDKIFSWKGS 115
Query: 147 THDELD--------MCHAEMNAILNKNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIY 198
+ + + HA ++A+LNK + C +Y + FP +C II++GI+EV+Y
Sbjct: 116 KAEGIPYHEKKYNYVVHAAVSAVLNKTRESIEGCTIYLTHFPDKDCVHAIIKAGIREVVY 175
Score = 46.6 bits (109), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 22/53 (41%), Positives = 33/53 (62%)
Query: 9 SADTKRCKLYTSLFPCNECAKVIIQSGIKEVIYMCDKHKQKPATIASKRMFDA 61
S + C LY + +PC+ CA+VI+QSGI+EVIY K + I+S++ A
Sbjct: 260 SPSVEGCTLYVTKYPCHMCAQVIVQSGIREVIYDKPGEWDKDSYISSRKTLAA 312
>gi|157953908|ref|YP_001498799.1| hypothetical protein AR158_C718R [Paramecium bursaria Chlorella
virus AR158]
gi|156068556|gb|ABU44263.1| hypothetical protein AR158_C718R [Paramecium bursaria Chlorella
virus AR158]
gi|448934965|gb|AGE58517.1| dCMP deaminase [Paramecium bursaria Chlorella virus NY-2B]
Length = 142
Score = 83.2 bits (204), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 43/95 (45%), Positives = 61/95 (64%), Gaps = 5/95 (5%)
Query: 106 SKDPVTRVGAVIVNEDNKIVGTGYNGMPIGCSDDEFPWDK-NTHDELDMCHAEMNAILN- 163
SKDP +V +I++ +N I GYNGMP G + W+K N ++ + HAE NAI+
Sbjct: 19 SKDPKMKVATMIIDNNNNIASVGYNGMPRGFEETTARWEKPNKYNYV--VHAEANAIVTA 76
Query: 164 -KNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVI 197
+N C + T+LFPCNECAK+IIQ+GI++VI
Sbjct: 77 ARNGFRLDGCSIITTLFPCNECAKLIIQAGIRKVI 111
Score = 48.5 bits (114), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 28/63 (44%), Positives = 37/63 (58%), Gaps = 4/63 (6%)
Query: 2 NAILN--KNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIYM--CDKHKQKPATIASKR 57
NAI+ +N C + T+LFPCNECAK+IIQ+GI++VI C + SK
Sbjct: 71 NAIVTAARNGFRLDGCSIITTLFPCNECAKLIIQAGIRKVITSKPCKDSSWLESFKYSKE 130
Query: 58 MFD 60
MFD
Sbjct: 131 MFD 133
>gi|163748467|ref|ZP_02155721.1| putative deoxycytidylate deaminase [Shewanella benthica KT99]
gi|161332045|gb|EDQ02722.1| putative deoxycytidylate deaminase [Shewanella benthica KT99]
Length = 149
Score = 83.2 bits (204), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 49/107 (45%), Positives = 60/107 (56%), Gaps = 3/107 (2%)
Query: 90 EWHEYFMASAFLVAKRSKDPVTRVGAVIVNEDNKIVGTGYNGMPIGCSDDEFPWDKNTHD 149
+W F+ A LVA SKDP T+VGAVI EDN+IV G+NG P G SD D
Sbjct: 4 KWATRFLQMAELVASWSKDPSTQVGAVI-TEDNRIVSLGFNGYPHGISDSAET-DNREMK 61
Query: 150 ELDMCHAEMNAILNKNSADTKRCKLYTSLFPCNECAKVIIQSGIKEV 196
L HAE NAIL D C+++ + FPC CA IIQ+G+ V
Sbjct: 62 LLKTLHAEENAILYAKR-DLSGCEIWVTHFPCPNCAAKIIQTGLSTV 107
>gi|167625262|ref|YP_001675556.1| zinc-binding CMP/dCMP deaminase [Shewanella halifaxensis HAW-EB4]
gi|167355284|gb|ABZ77897.1| CMP/dCMP deaminase zinc-binding [Shewanella halifaxensis HAW-EB4]
Length = 143
Score = 83.2 bits (204), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 49/107 (45%), Positives = 60/107 (56%), Gaps = 3/107 (2%)
Query: 90 EWHEYFMASAFLVAKRSKDPVTRVGAVIVNEDNKIVGTGYNGMPIGCSDDEFPWDKNTHD 149
+W F+ A LVA SKDP T+VGAVI EDN+IV G+NG P G SD D
Sbjct: 4 KWATRFLQMAELVASWSKDPSTQVGAVI-TEDNRIVSLGFNGYPHGISDSAET-DNREMK 61
Query: 150 ELDMCHAEMNAILNKNSADTKRCKLYTSLFPCNECAKVIIQSGIKEV 196
L HAE NAIL D C+++ + FPC CA IIQ+G+ V
Sbjct: 62 LLKTLHAEENAILYAKR-DLSGCEIWVTHFPCPNCAAKIIQTGLSTV 107
>gi|374338689|ref|YP_005095406.1| dCMP deaminase [Streptococcus macedonicus ACA-DC 198]
gi|372284806|emb|CCF03101.1| dCMP deaminase; Late competence protein ComEB [Streptococcus
macedonicus ACA-DC 198]
Length = 151
Score = 83.2 bits (204), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 50/118 (42%), Positives = 70/118 (59%), Gaps = 10/118 (8%)
Query: 87 DVLEWHEYFMASAFLVAKRSKDPVTRVGAVIVNEDNKIVGTGYNGMPIGCSDDEFPWDKN 146
D L W +YFMA+A L++KRS VGAV+V +DN+I+ TGYNG G S+ + +
Sbjct: 3 DRLSWEDYFMANAELISKRSTCDRAFVGAVLV-KDNRIIATGYNG---GVSETDNCNEVG 58
Query: 147 THDELDMC----HAEMNAILN--KNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIY 198
E C HAEMNA++ K TK K+Y + FPC C K ++Q+GIK++ Y
Sbjct: 59 HKMEDGHCIRTVHAEMNALIQCAKEGISTKGIKIYVTHFPCINCTKALLQAGIKKITY 116
Score = 41.2 bits (95), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 18/43 (41%), Positives = 27/43 (62%), Gaps = 2/43 (4%)
Query: 1 MNAILN--KNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIY 41
MNA++ K TK K+Y + FPC C K ++Q+GIK++ Y
Sbjct: 74 MNALIQCAKEGISTKGIKIYVTHFPCINCTKALLQAGIKKITY 116
>gi|157963093|ref|YP_001503127.1| zinc-binding CMP/dCMP deaminase [Shewanella pealeana ATCC 700345]
gi|157848093|gb|ABV88592.1| CMP/dCMP deaminase zinc-binding [Shewanella pealeana ATCC 700345]
Length = 144
Score = 83.2 bits (204), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 49/107 (45%), Positives = 60/107 (56%), Gaps = 3/107 (2%)
Query: 90 EWHEYFMASAFLVAKRSKDPVTRVGAVIVNEDNKIVGTGYNGMPIGCSDDEFPWDKNTHD 149
+W F+ A LVA SKDP T+VGAVI EDN+IV G+NG P G SD D
Sbjct: 4 KWATRFLQMAELVASWSKDPSTQVGAVI-TEDNRIVSLGFNGYPHGISDSAET-DNREMK 61
Query: 150 ELDMCHAEMNAILNKNSADTKRCKLYTSLFPCNECAKVIIQSGIKEV 196
L HAE NAIL D C+++ + FPC CA IIQ+G+ V
Sbjct: 62 LLKTLHAEENAILYAKR-DLSGCEIWVTHFPCPNCAAKIIQTGLSTV 107
>gi|167628994|ref|YP_001679493.1| come operon protein 2 [Heliobacterium modesticaldum Ice1]
gi|167591734|gb|ABZ83482.1| come operon protein 2 [Heliobacterium modesticaldum Ice1]
Length = 146
Score = 83.2 bits (204), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 50/116 (43%), Positives = 68/116 (58%), Gaps = 8/116 (6%)
Query: 90 EWHEYFMASAFLVAKRSKDPVTRVGAVIVNEDNKIVGTGYNGMPIG---CSDDEF-PWDK 145
+W YF+ AF V+ RS P VGAVIV +D +I GTGYNG P G C+D W+
Sbjct: 4 DWDSYFIDIAFAVSSRSTCPRRSVGAVIV-KDKRIKGTGYNGSPAGLPHCTDAGCCMWNN 62
Query: 146 NTHDELDMCHAEMNAILNKNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIYMCD 201
+ + HAE+NAI+ + + K +Y + PC ECAKVII SGI+ V++ D
Sbjct: 63 HC---VRTIHAEVNAIMECSPEERKGATIYVTDRPCAECAKVIISSGIRRVVFARD 115
Score = 45.1 bits (105), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 20/49 (40%), Positives = 31/49 (63%)
Query: 1 MNAILNKNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIYMCDKHKQK 49
+NAI+ + + K +Y + PC ECAKVII SGI+ V++ D H ++
Sbjct: 72 VNAIMECSPEERKGATIYVTDRPCAECAKVIISSGIRRVVFARDYHTEQ 120
>gi|23012876|ref|ZP_00052863.1| COG2131: Deoxycytidylate deaminase [Magnetospirillum
magnetotacticum MS-1]
Length = 140
Score = 82.8 bits (203), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 41/110 (37%), Positives = 63/110 (57%), Gaps = 3/110 (2%)
Query: 89 LEWHEYFMASAFLVAKRSKDPVTRVGAVIVNEDNKIVGTGYNGMPIGCSDDEFPWDKNTH 148
+ W++YFM A A +SKDP T+VGAV V D +I TGYNG+P G D ++
Sbjct: 3 MNWYDYFMGFARHAASKSKDPSTQVGAVAVGPDGEIRATGYNGLPRGVEDKPERMERPA- 61
Query: 149 DELDMCHAEMNAILN--KNSADTKRCKLYTSLFPCNECAKVIIQSGIKEV 196
L HAE N + + + K C +Y + +PC+ CA+ +IQ+G+ ++
Sbjct: 62 KYLWTSHAEENLVAHAARVGVSLKGCTVYVTHYPCSRCARSLIQAGVAKI 111
>gi|157376789|ref|YP_001475389.1| zinc-binding CMP/dCMP deaminase [Shewanella sediminis HAW-EB3]
gi|157319163|gb|ABV38261.1| CMP/dCMP deaminase, zinc-binding [Shewanella sediminis HAW-EB3]
Length = 145
Score = 82.8 bits (203), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 48/107 (44%), Positives = 62/107 (57%), Gaps = 3/107 (2%)
Query: 90 EWHEYFMASAFLVAKRSKDPVTRVGAVIVNEDNKIVGTGYNGMPIGCSDDEFPWDKNTHD 149
+W F+ A LVA SKDP T+VGAVI E+N+IV G+NG P G SD D
Sbjct: 4 KWAIRFLQMAELVASWSKDPSTQVGAVI-TENNRIVSLGFNGYPHGISDSAET-DNREMK 61
Query: 150 ELDMCHAEMNAILNKNSADTKRCKLYTSLFPCNECAKVIIQSGIKEV 196
L HAE NAIL+ D C+++ + FPC CA IIQ+G++ V
Sbjct: 62 LLKTLHAEENAILHAKR-DLSSCEIWVTHFPCPNCAAKIIQTGLRAV 107
Score = 38.9 bits (89), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 26/76 (34%), Positives = 37/76 (48%), Gaps = 9/76 (11%)
Query: 2 NAILNKNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIYMCDKHKQKPATIASKRMFDA 61
NAIL+ D C+++ + FPC CA IIQ+G++ V H +P+ R D
Sbjct: 71 NAILHAKR-DLSSCEIWVTHFPCPNCAAKIIQTGLRAV------HSPQPSEDFLSRWGDK 123
Query: 62 AKVHYWSEMDKMNGVQ 77
KV +M GVQ
Sbjct: 124 IKVS--QDMFDQAGVQ 137
>gi|227500311|ref|ZP_03930378.1| competence protein ComEB family protein [Anaerococcus tetradius
ATCC 35098]
gi|227217597|gb|EEI82909.1| competence protein ComEB family protein [Anaerococcus tetradius
ATCC 35098]
Length = 148
Score = 82.8 bits (203), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 51/115 (44%), Positives = 61/115 (53%), Gaps = 3/115 (2%)
Query: 87 DVLEWHEYFMASAFLVAKRSKDPVTRVGAVIVNEDNKIVGTGYNGMPIGCSD-DEFPWDK 145
D L W EYFM A VA+R VG V+VNE+N+IV TGYNG G DE
Sbjct: 4 DRLSWQEYFMKLAKTVARRGTCDRAYVGCVLVNEENRIVSTGYNGSIKGNPHCDEVGHTM 63
Query: 146 NTHDELDMCHAEMNAIL--NKNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIY 198
+ HAEMNAIL K TK Y + FPC C K +IQ+GIK++ Y
Sbjct: 64 RDGHCIATIHAEMNAILYCAKEGIATKNTICYVTHFPCLNCTKSLIQAGIKKIYY 118
Score = 37.4 bits (85), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 20/43 (46%), Positives = 25/43 (58%), Gaps = 2/43 (4%)
Query: 1 MNAIL--NKNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIY 41
MNAIL K TK Y + FPC C K +IQ+GIK++ Y
Sbjct: 76 MNAILYCAKEGIATKNTICYVTHFPCLNCTKSLIQAGIKKIYY 118
>gi|294142299|ref|YP_003558277.1| deoxycytidylate deaminase [Shewanella violacea DSS12]
gi|293328768|dbj|BAJ03499.1| deoxycytidylate deaminase, putative [Shewanella violacea DSS12]
Length = 148
Score = 82.8 bits (203), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 49/107 (45%), Positives = 60/107 (56%), Gaps = 3/107 (2%)
Query: 90 EWHEYFMASAFLVAKRSKDPVTRVGAVIVNEDNKIVGTGYNGMPIGCSDDEFPWDKNTHD 149
+W F+ A LVA SKDP T+VGAVI EDN+IV G+NG P G SD D
Sbjct: 3 KWATRFLQMAELVASWSKDPSTQVGAVI-TEDNRIVSLGFNGYPHGISDSAET-DNREMK 60
Query: 150 ELDMCHAEMNAILNKNSADTKRCKLYTSLFPCNECAKVIIQSGIKEV 196
L HAE NAIL D C+++ + FPC CA IIQ+G+ V
Sbjct: 61 LLKTLHAEENAILYAKR-DLSGCEIWVTHFPCPNCAAKIIQTGLSTV 106
>gi|313888782|ref|ZP_07822443.1| putative ComE operon protein 2 [Peptoniphilus harei
ACS-146-V-Sch2b]
gi|312845151|gb|EFR32551.1| putative ComE operon protein 2 [Peptoniphilus harei
ACS-146-V-Sch2b]
Length = 139
Score = 82.8 bits (203), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 47/111 (42%), Positives = 59/111 (53%), Gaps = 3/111 (2%)
Query: 91 WHEYFMASAFLVAKRSKDPVTRVGAVIVNEDNKIVGTGYNGMPIGCSD-DEFPWDKNTHD 149
W EYFM +VA RS VG V+VN DN+I+ TGYNG G DE
Sbjct: 5 WDEYFMEITEMVATRSTCDRAFVGCVLVNSDNRIISTGYNGSVTGNPHCDEVGHTMRDGH 64
Query: 150 ELDMCHAEMNAIL--NKNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIY 198
+ HAEMNA+L K + K Y + FPC C K +IQ+GI+E+IY
Sbjct: 65 CIATIHAEMNALLYCAKEGISVRGAKAYVTHFPCLNCTKALIQAGIREIIY 115
Score = 41.6 bits (96), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 19/43 (44%), Positives = 26/43 (60%), Gaps = 2/43 (4%)
Query: 1 MNAIL--NKNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIY 41
MNA+L K + K Y + FPC C K +IQ+GI+E+IY
Sbjct: 73 MNALLYCAKEGISVRGAKAYVTHFPCLNCTKALIQAGIREIIY 115
>gi|319892646|ref|YP_004149521.1| dCMP deaminase [Staphylococcus pseudintermedius HKU10-03]
gi|317162342|gb|ADV05885.1| dCMP deaminase; Late competence protein ComEB [Staphylococcus
pseudintermedius HKU10-03]
Length = 153
Score = 82.8 bits (203), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 49/118 (41%), Positives = 65/118 (55%), Gaps = 8/118 (6%)
Query: 89 LEWHEYFMASAFLVAKRSKDPVTRVGAVIVNEDNKIVGTGYNGMPIG---CSDDEFPWDK 145
++WHEYFMA + L+A RS VGA I +DN+I+ GYNG G C D+ +
Sbjct: 4 IQWHEYFMAQSHLLALRSTCTRLSVGATI-TKDNRIIAGGYNGSVSGEVHCIDEGCLMEG 62
Query: 146 NTHDELDMCHAEMNAIL--NKNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIYMCD 201
+ HAEMNAIL +K T+ +Y + FPC C K IIQ+GIK + Y D
Sbjct: 63 G--HCIRTIHAEMNAILQCSKQGVSTENATIYVTHFPCLNCTKSIIQAGIKTIYYAED 118
Score = 48.1 bits (113), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/68 (38%), Positives = 36/68 (52%), Gaps = 6/68 (8%)
Query: 1 MNAIL--NKNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIYMCDKHKQKPATIASKRM 58
MNAIL +K T+ +Y + FPC C K IIQ+GIK + Y D H A ++
Sbjct: 73 MNAILQCSKQGVSTENATIYVTHFPCLNCTKSIIQAGIKTIYYAEDYHNHDYAV----KL 128
Query: 59 FDAAKVHY 66
+ + VHY
Sbjct: 129 LEQSGVHY 136
>gi|257065945|ref|YP_003152201.1| zinc-binding CMP/dCMP deaminase [Anaerococcus prevotii DSM 20548]
gi|256797825|gb|ACV28480.1| CMP/dCMP deaminase zinc-binding [Anaerococcus prevotii DSM 20548]
Length = 148
Score = 82.8 bits (203), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 51/115 (44%), Positives = 61/115 (53%), Gaps = 3/115 (2%)
Query: 87 DVLEWHEYFMASAFLVAKRSKDPVTRVGAVIVNEDNKIVGTGYNGMPIGCSD-DEFPWDK 145
D L W EYFM A VA+R VG V+VNE+N+IV TGYNG G DE
Sbjct: 4 DRLSWEEYFMKLAKTVARRGTCDRAYVGCVLVNEENRIVSTGYNGSIKGNPHCDEVGHTM 63
Query: 146 NTHDELDMCHAEMNAIL--NKNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIY 198
+ HAEMNAIL K TK Y + FPC C K +IQ+GIK++ Y
Sbjct: 64 RDGHCIATIHAEMNAILYCAKEGIATKNTICYVTHFPCLNCTKSLIQAGIKKIYY 118
Score = 37.4 bits (85), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 20/43 (46%), Positives = 25/43 (58%), Gaps = 2/43 (4%)
Query: 1 MNAIL--NKNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIY 41
MNAIL K TK Y + FPC C K +IQ+GIK++ Y
Sbjct: 76 MNAILYCAKEGIATKNTICYVTHFPCLNCTKSLIQAGIKKIYY 118
>gi|386319145|ref|YP_006015308.1| ComE operon protein 2 [Staphylococcus pseudintermedius ED99]
gi|323464316|gb|ADX76469.1| ComE operon protein 2, putative [Staphylococcus pseudintermedius
ED99]
Length = 153
Score = 82.8 bits (203), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 49/118 (41%), Positives = 65/118 (55%), Gaps = 8/118 (6%)
Query: 89 LEWHEYFMASAFLVAKRSKDPVTRVGAVIVNEDNKIVGTGYNGMPIG---CSDDEFPWDK 145
++WHEYFMA + L+A RS VGA I +DN+I+ GYNG G C D+ +
Sbjct: 4 IQWHEYFMAQSHLLALRSTCTRLSVGATIT-KDNRIIAGGYNGSVSGEVHCIDEGCLMED 62
Query: 146 NTHDELDMCHAEMNAIL--NKNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIYMCD 201
+ HAEMNAIL +K T+ +Y + FPC C K IIQ+GIK + Y D
Sbjct: 63 G--HCIRTIHAEMNAILQCSKQGVSTENATIYVTHFPCLNCTKSIIQAGIKTIYYAED 118
Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/68 (38%), Positives = 36/68 (52%), Gaps = 6/68 (8%)
Query: 1 MNAIL--NKNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIYMCDKHKQKPATIASKRM 58
MNAIL +K T+ +Y + FPC C K IIQ+GIK + Y D H A ++
Sbjct: 73 MNAILQCSKQGVSTENATIYVTHFPCLNCTKSIIQAGIKTIYYAEDYHNHDYAM----KL 128
Query: 59 FDAAKVHY 66
+ + VHY
Sbjct: 129 LEQSGVHY 136
>gi|399924774|ref|ZP_10782132.1| putative late competence protein required for DNA binding
[Peptoniphilus rhinitidis 1-13]
Length = 139
Score = 82.4 bits (202), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 48/111 (43%), Positives = 58/111 (52%), Gaps = 3/111 (2%)
Query: 91 WHEYFMASAFLVAKRSKDPVTRVGAVIVNEDNKIVGTGYNGMPIGCSD-DEFPWDKNTHD 149
W EYFM +VA RS VG V+VN DN+I+ TGYNG G DE
Sbjct: 5 WDEYFMEITKMVATRSTCDRAFVGCVLVNSDNRIISTGYNGSVTGNPHCDEVGHTMRDGH 64
Query: 150 ELDMCHAEMNAIL--NKNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIY 198
+ HAEMNA+L K K K Y + FPC C K +IQ+GI E+IY
Sbjct: 65 CIATIHAEMNALLYCAKEGISVKGAKAYVTHFPCLNCTKALIQAGISEIIY 115
Score = 40.8 bits (94), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 20/43 (46%), Positives = 25/43 (58%), Gaps = 2/43 (4%)
Query: 1 MNAIL--NKNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIY 41
MNA+L K K K Y + FPC C K +IQ+GI E+IY
Sbjct: 73 MNALLYCAKEGISVKGAKAYVTHFPCLNCTKALIQAGISEIIY 115
>gi|320547474|ref|ZP_08041760.1| competence protein comEB [Streptococcus equinus ATCC 9812]
gi|320447819|gb|EFW88576.1| competence protein comEB [Streptococcus equinus ATCC 9812]
Length = 154
Score = 82.4 bits (202), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 49/118 (41%), Positives = 70/118 (59%), Gaps = 10/118 (8%)
Query: 87 DVLEWHEYFMASAFLVAKRSKDPVTRVGAVIVNEDNKIVGTGYNGMPIGCSDDEFPWDKN 146
D L W +YFMA+A L++KRS VGAV+V +DN+I+ TGYNG G S+ + +
Sbjct: 3 DRLSWEDYFMANAELISKRSTCNRAFVGAVLV-KDNRIIATGYNG---GVSETDNCSEAG 58
Query: 147 THDELDMC----HAEMNAILN--KNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIY 198
E C HAEMNA++ K TK ++Y + FPC C K ++Q+GIK++ Y
Sbjct: 59 HKMEDGHCIRTVHAEMNALIQCAKEGISTKGTEIYVTHFPCINCTKALLQAGIKKITY 116
Score = 39.7 bits (91), Expect = 0.76, Method: Compositional matrix adjust.
Identities = 17/43 (39%), Positives = 27/43 (62%), Gaps = 2/43 (4%)
Query: 1 MNAILN--KNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIY 41
MNA++ K TK ++Y + FPC C K ++Q+GIK++ Y
Sbjct: 74 MNALIQCAKEGISTKGTEIYVTHFPCINCTKALLQAGIKKITY 116
>gi|255655869|ref|ZP_05401278.1| putative phage-related deoxycytidylate deaminase (putative late
competence protein) [Clostridium difficile QCD-23m63]
Length = 145
Score = 82.4 bits (202), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 49/121 (40%), Positives = 63/121 (52%), Gaps = 7/121 (5%)
Query: 83 KRVDDVLEWHEYFMASAFLVAKRSKDPVTRVGAVIVNEDNKIVGTGYNGMPIG---CSDD 139
K++++ W EYFM VA+R VGA+IVN +N+IV TGYNG G CS
Sbjct: 3 KKLENRCSWQEYFMRLCETVAERGTCDRAYVGAIIVNSENRIVSTGYNGSISGDKHCS-- 60
Query: 140 EFPWDKNTHDELDMCHAEMNAIL--NKNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVI 197
E + + HAE NA+ K K C +Y + FPC C K IIQSGIK +
Sbjct: 61 EVGHEMRDGHCIRTIHAEQNALYYCAKEGISVKDCSIYVTHFPCLNCTKAIIQSGIKHIY 120
Query: 198 Y 198
Y
Sbjct: 121 Y 121
Score = 40.0 bits (92), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 17/35 (48%), Positives = 20/35 (57%)
Query: 7 KNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIY 41
K K C +Y + FPC C K IIQSGIK + Y
Sbjct: 87 KEGISVKDCSIYVTHFPCLNCTKAIIQSGIKHIYY 121
>gi|448925683|gb|AGE49262.1| dCMP deaminase [Acanthocystis turfacea Chlorella virus Br0604L]
Length = 154
Score = 82.4 bits (202), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 40/106 (37%), Positives = 68/106 (64%), Gaps = 3/106 (2%)
Query: 94 YFMASAFLVAKRSKDPVTRVGAVIVNEDNKIVGTGYNGMPIGCSDDEFPWDKNTHDELDM 153
++ S + SKDP T+V A+++++++ I+ GYNG+P G + E W K T + +
Sbjct: 12 FYSLSCYHAELFSKDPNTKVAAMVIDKNHNILSVGYNGLPRGFEETEERWSKPTKYQY-V 70
Query: 154 CHAEMNAILN--KNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVI 197
HAE NAI +N A + + ++LFPC++CA++IIQ+GIK+V+
Sbjct: 71 VHAEANAICTAARNGAKLEGGSIVSTLFPCDQCARLIIQAGIKKVV 116
Score = 41.2 bits (95), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 15/34 (44%), Positives = 27/34 (79%)
Query: 7 KNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVI 40
+N A + + ++LFPC++CA++IIQ+GIK+V+
Sbjct: 83 RNGAKLEGGSIVSTLFPCDQCARLIIQAGIKKVV 116
>gi|170728271|ref|YP_001762297.1| zinc-binding CMP/dCMP deaminase [Shewanella woodyi ATCC 51908]
gi|169813618|gb|ACA88202.1| CMP/dCMP deaminase zinc-binding [Shewanella woodyi ATCC 51908]
Length = 145
Score = 82.4 bits (202), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 49/107 (45%), Positives = 60/107 (56%), Gaps = 3/107 (2%)
Query: 90 EWHEYFMASAFLVAKRSKDPVTRVGAVIVNEDNKIVGTGYNGMPIGCSDDEFPWDKNTHD 149
+W F+ A LVA SKDP T+VGAVI EDN+IV G+NG P G SD D
Sbjct: 4 KWDVRFLQMAELVASWSKDPSTQVGAVI-TEDNRIVSLGFNGYPHGISDSAET-DNREMK 61
Query: 150 ELDMCHAEMNAILNKNSADTKRCKLYTSLFPCNECAKVIIQSGIKEV 196
L HAE NAIL D C+++ + FPC CA IIQ+G+ V
Sbjct: 62 LLKTLHAEENAILYAKR-DLSGCEIWVTHFPCPNCAAKIIQTGLTTV 107
>gi|296450850|ref|ZP_06892600.1| cytidine/deoxycytidylate deaminase [Clostridium difficile NAP08]
gi|296879147|ref|ZP_06903142.1| cytidine/deoxycytidylate deaminase [Clostridium difficile NAP07]
gi|296260321|gb|EFH07166.1| cytidine/deoxycytidylate deaminase [Clostridium difficile NAP08]
gi|296429690|gb|EFH15542.1| cytidine/deoxycytidylate deaminase [Clostridium difficile NAP07]
Length = 150
Score = 82.0 bits (201), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 49/121 (40%), Positives = 63/121 (52%), Gaps = 7/121 (5%)
Query: 83 KRVDDVLEWHEYFMASAFLVAKRSKDPVTRVGAVIVNEDNKIVGTGYNGMPIG---CSDD 139
K++++ W EYFM VA+R VGA+IVN +N+IV TGYNG G CS
Sbjct: 8 KKLENRCSWQEYFMRLCETVAERGTCDRAYVGAIIVNSENRIVSTGYNGSISGDKHCS-- 65
Query: 140 EFPWDKNTHDELDMCHAEMNAIL--NKNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVI 197
E + + HAE NA+ K K C +Y + FPC C K IIQSGIK +
Sbjct: 66 EVGHEMRDGHCIRTIHAEQNALYYCAKEGISVKDCSIYVTHFPCLNCTKAIIQSGIKHIY 125
Query: 198 Y 198
Y
Sbjct: 126 Y 126
Score = 40.4 bits (93), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 17/35 (48%), Positives = 20/35 (57%)
Query: 7 KNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIY 41
K K C +Y + FPC C K IIQSGIK + Y
Sbjct: 92 KEGISVKDCSIYVTHFPCLNCTKAIIQSGIKHIYY 126
>gi|306834244|ref|ZP_07467363.1| competence protein ComEB [Streptococcus bovis ATCC 700338]
gi|304423593|gb|EFM26740.1| competence protein ComEB [Streptococcus bovis ATCC 700338]
Length = 155
Score = 82.0 bits (201), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 49/118 (41%), Positives = 70/118 (59%), Gaps = 10/118 (8%)
Query: 87 DVLEWHEYFMASAFLVAKRSKDPVTRVGAVIVNEDNKIVGTGYNGMPIGCSDDEFPWDKN 146
D L W +YFMA+A L++KRS VGAV+V +DN+I+ TGYNG G S+ + +
Sbjct: 4 DRLSWQDYFMANAELISKRSTCDRAFVGAVLV-KDNRIIATGYNG---GVSETDNCNEVG 59
Query: 147 THDELDMC----HAEMNAILN--KNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIY 198
E C HAEMNA++ K TK ++Y + FPC C K ++Q+GIK++ Y
Sbjct: 60 HKMEDGHCIRTVHAEMNALIQCAKEGISTKGTEIYVTHFPCINCTKALLQAGIKKITY 117
Score = 40.0 bits (92), Expect = 0.66, Method: Compositional matrix adjust.
Identities = 17/43 (39%), Positives = 27/43 (62%), Gaps = 2/43 (4%)
Query: 1 MNAILN--KNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIY 41
MNA++ K TK ++Y + FPC C K ++Q+GIK++ Y
Sbjct: 75 MNALIQCAKEGISTKGTEIYVTHFPCINCTKALLQAGIKKITY 117
>gi|395241859|ref|ZP_10418859.1| dCMP deaminase [Lactobacillus pasteurii CRBIP 24.76]
gi|394480607|emb|CCI85099.1| dCMP deaminase [Lactobacillus pasteurii CRBIP 24.76]
Length = 162
Score = 82.0 bits (201), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 46/122 (37%), Positives = 68/122 (55%), Gaps = 12/122 (9%)
Query: 87 DVLEWHEYFMASAFLVAKRSKDPVTRVGAVIVNEDNKIVGTGYNGMPIGCSDDEFPWDKN 146
D + W +YFM A ++A+RS VG+V+V +DN+I+GTGYNG G + D
Sbjct: 3 DRIPWRQYFMMQALVIAQRSTCDRALVGSVLV-KDNRIIGTGYNGAVSG----QPHCDDV 57
Query: 147 THDELD-----MCHAEMNAILN--KNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIYM 199
H +D H+EMN+++ KN T ++Y + FPC C K +IQ+GIK + Y
Sbjct: 58 GHQMVDGHCVRTIHSEMNSLMQCAKNGVSTSETEIYVTHFPCYNCTKALIQAGIKRINYY 117
Query: 200 CD 201
D
Sbjct: 118 FD 119
Score = 41.6 bits (96), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 20/55 (36%), Positives = 31/55 (56%), Gaps = 3/55 (5%)
Query: 1 MNAILN--KNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIYMCDKHKQKPATI 53
MN+++ KN T ++Y + FPC C K +IQ+GIK + Y D ++ P I
Sbjct: 74 MNSLMQCAKNGVSTSETEIYVTHFPCYNCTKALIQAGIKRINYYFD-YRDNPLAI 127
>gi|288906089|ref|YP_003431311.1| competence protein ComEB required for DNA binding and uptake
[Streptococcus gallolyticus UCN34]
gi|306832128|ref|ZP_07465282.1| competence protein ComEB [Streptococcus gallolyticus subsp.
gallolyticus TX20005]
gi|325979054|ref|YP_004288770.1| competence protein ComEB [Streptococcus gallolyticus subsp.
gallolyticus ATCC BAA-2069]
gi|336064973|ref|YP_004559832.1| dCMP deaminase comEB [Streptococcus pasteurianus ATCC 43144]
gi|386338530|ref|YP_006034699.1| dCMP deaminase comEB [Streptococcus gallolyticus subsp.
gallolyticus ATCC 43143]
gi|288732815|emb|CBI14391.1| putative competence protein ComEB required for DNA binding and
uptake [Streptococcus gallolyticus UCN34]
gi|304425567|gb|EFM28685.1| competence protein ComEB [Streptococcus gallolyticus subsp.
gallolyticus TX20005]
gi|325178982|emb|CBZ49026.1| competence protein ComEB [Streptococcus gallolyticus subsp.
gallolyticus ATCC BAA-2069]
gi|334281166|dbj|BAK28740.1| dCMP deaminase comEB [Streptococcus gallolyticus subsp.
gallolyticus ATCC 43143]
gi|334283173|dbj|BAK30746.1| dCMP deaminase comEB [Streptococcus pasteurianus ATCC 43144]
Length = 154
Score = 82.0 bits (201), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 49/118 (41%), Positives = 70/118 (59%), Gaps = 10/118 (8%)
Query: 87 DVLEWHEYFMASAFLVAKRSKDPVTRVGAVIVNEDNKIVGTGYNGMPIGCSDDEFPWDKN 146
D L W +YFMA+A L++KRS VGAV+V +DN+I+ TGYNG G S+ + +
Sbjct: 3 DRLSWQDYFMANAELISKRSTCDRAFVGAVLV-KDNRIIATGYNG---GVSETDNCNEVG 58
Query: 147 THDELDMC----HAEMNAILN--KNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIY 198
E C HAEMNA++ K TK ++Y + FPC C K ++Q+GIK++ Y
Sbjct: 59 HKMEDGHCIRTVHAEMNALIQCAKEGISTKGTEIYVTHFPCINCTKALLQAGIKKITY 116
Score = 39.7 bits (91), Expect = 0.68, Method: Compositional matrix adjust.
Identities = 17/43 (39%), Positives = 27/43 (62%), Gaps = 2/43 (4%)
Query: 1 MNAILN--KNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIY 41
MNA++ K TK ++Y + FPC C K ++Q+GIK++ Y
Sbjct: 74 MNALIQCAKEGISTKGTEIYVTHFPCINCTKALLQAGIKKITY 116
>gi|193215780|ref|YP_001996979.1| CMP/dCMP deaminase [Chloroherpeton thalassium ATCC 35110]
gi|193089257|gb|ACF14532.1| CMP/dCMP deaminase zinc-binding [Chloroherpeton thalassium ATCC
35110]
Length = 179
Score = 81.6 bits (200), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 48/122 (39%), Positives = 66/122 (54%), Gaps = 13/122 (10%)
Query: 89 LEWHEYFMASAFLVAKRSKDPVTRVGAVIVNEDNKIVGTGYNGMPIG---CSDDEFPWDK 145
L W EYFM+ A L+++R+ +GAVIV DN I+ TGYNG P G C DD
Sbjct: 24 LGWDEYFMSVAHLISQRATCKRAHIGAVIV-RDNNILATGYNGAPSGLPHCDDDNCLIYT 82
Query: 146 NTHDE-------LDMCHAEMNAILN--KNSADTKRCKLYTSLFPCNECAKVIIQSGIKEV 196
+TH + ++ HAEMNAI+ K+ K +Y + PC C K +I GIK++
Sbjct: 83 STHPDGTIEQNCMNTIHAEMNAIIQAAKHGVSIKDADIYVTASPCINCLKALINVGIKQI 142
Query: 197 IY 198
Y
Sbjct: 143 YY 144
>gi|255101026|ref|ZP_05330003.1| putative phage-related deoxycytidylate deaminase (putative late
competence protein) [Clostridium difficile QCD-63q42]
Length = 145
Score = 81.6 bits (200), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 48/121 (39%), Positives = 63/121 (52%), Gaps = 7/121 (5%)
Query: 83 KRVDDVLEWHEYFMASAFLVAKRSKDPVTRVGAVIVNEDNKIVGTGYNGMPIG---CSDD 139
K++++ W EYFM VA+R VGA+IVN +N+IV TGYNG G CS
Sbjct: 3 KKLENRCSWQEYFMRLCETVAERGTCDRAYVGAIIVNSENRIVSTGYNGSISGDKHCS-- 60
Query: 140 EFPWDKNTHDELDMCHAEMNAIL--NKNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVI 197
E + + HAE NA+ K K C +Y + FPC C K IIQ+GIK +
Sbjct: 61 EVGHEMRDGHCIRTIHAEQNALYYCAKEGISVKNCSIYVTHFPCLNCTKAIIQAGIKHIY 120
Query: 198 Y 198
Y
Sbjct: 121 Y 121
Score = 39.7 bits (91), Expect = 0.77, Method: Compositional matrix adjust.
Identities = 16/35 (45%), Positives = 20/35 (57%)
Query: 7 KNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIY 41
K K C +Y + FPC C K IIQ+GIK + Y
Sbjct: 87 KEGISVKNCSIYVTHFPCLNCTKAIIQAGIKHIYY 121
>gi|224476697|ref|YP_002634303.1| putative deaminase [Staphylococcus carnosus subsp. carnosus TM300]
gi|222421304|emb|CAL28118.1| putative deaminase similar to ComEB [Staphylococcus carnosus subsp.
carnosus TM300]
Length = 153
Score = 81.6 bits (200), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 49/120 (40%), Positives = 66/120 (55%), Gaps = 8/120 (6%)
Query: 87 DVLEWHEYFMASAFLVAKRSKDPVTRVGAVIVNEDNKIVGTGYNGMPIG---CSDDEFPW 143
D ++W EYFMA + L++ RS VGA IV +DN+I+ GYNG G C D+
Sbjct: 2 DRIKWEEYFMAQSHLLSLRSTCTRLSVGATIV-KDNRIIAGGYNGSVAGEVHCIDEGCLM 60
Query: 144 DKNTHDELDMCHAEMNAILN--KNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIYMCD 201
+ N + HAEMNA+L K T+ +Y + FPC C K IIQ+GIK + Y D
Sbjct: 61 EDN--HCIRTIHAEMNALLQCTKQGVSTEGATIYVTHFPCLNCTKSIIQAGIKRIYYAQD 118
Score = 44.7 bits (104), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 28/74 (37%), Positives = 38/74 (51%), Gaps = 10/74 (13%)
Query: 1 MNAILN--KNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIYMCDKHKQ-------KPA 51
MNA+L K T+ +Y + FPC C K IIQ+GIK + Y D H K +
Sbjct: 73 MNALLQCTKQGVSTEGATIYVTHFPCLNCTKSIIQAGIKRIYYAQDYHNHEYAIQLLKQS 132
Query: 52 TIASKRM-FDAAKV 64
I K++ FDA +V
Sbjct: 133 GIEYKKIPFDARQV 146
>gi|357235718|ref|ZP_09123061.1| cytidine/deoxycytidylate deaminase family protein [Streptococcus
criceti HS-6]
gi|356883700|gb|EHI73900.1| cytidine/deoxycytidylate deaminase family protein [Streptococcus
criceti HS-6]
Length = 151
Score = 81.6 bits (200), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 48/123 (39%), Positives = 72/123 (58%), Gaps = 10/123 (8%)
Query: 85 VDDVLEWHEYFMASAFLVAKRSKDPVTRVGAVIVNEDNKIVGTGYNGMPIGCSDDEFPWD 144
++ L W +YFMA+A L++KRS VGAV+V +D +I+ TGYNG G S+ + +
Sbjct: 2 TENRLSWQDYFMANAELISKRSTCDRAYVGAVLV-KDKRIIATGYNG---GVSETDNCNE 57
Query: 145 KNTHDELDMC----HAEMNAILN--KNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIY 198
+ E C HAEMNA++ K TK ++Y + FPC C K ++Q+GIK++ Y
Sbjct: 58 VGHYMEDGHCIRTVHAEMNALIQCAKEGISTKNTEIYVTHFPCINCTKALLQAGIKKITY 117
Query: 199 MCD 201
D
Sbjct: 118 KAD 120
Score = 41.6 bits (96), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 21/60 (35%), Positives = 34/60 (56%), Gaps = 5/60 (8%)
Query: 1 MNAILN--KNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIYMCDKHKQKPATIASKRM 58
MNA++ K TK ++Y + FPC C K ++Q+GIK++ Y D +P +A + M
Sbjct: 75 MNALIQCAKEGISTKNTEIYVTHFPCINCTKALLQAGIKKITYKAD---YRPNALAIELM 131
>gi|407771243|ref|ZP_11118604.1| CMP/dCMP deaminase, zinc-binding protein [Thalassospira xiamenensis
M-5 = DSM 17429]
gi|407285813|gb|EKF11308.1| CMP/dCMP deaminase, zinc-binding protein [Thalassospira xiamenensis
M-5 = DSM 17429]
Length = 164
Score = 81.6 bits (200), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 44/109 (40%), Positives = 58/109 (53%), Gaps = 2/109 (1%)
Query: 91 WHEYFMASAFLVAKRSKDPVTRVGAVIVNEDNKIVGTGYNGMPIGCSDDEFPWDKNTHDE 150
WH F+ A +A+ SKD T+VGAV++ +I GYNG P G D+ +
Sbjct: 4 WHHRFLGLASHIAEWSKDRSTQVGAVVIGPKKEIRAVGYNGFPRGVDDNVESRHQRPEKY 63
Query: 151 LDMCHAEMNAILNKNSADTK--RCKLYTSLFPCNECAKVIIQSGIKEVI 197
HAE NAI N + T C LY + FPC +CA+ IIQ+GI EV
Sbjct: 64 AYTEHAERNAIYNASYTGTSLDGCALYVTHFPCCDCARAIIQAGIAEVF 112
Score = 42.4 bits (98), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 31/74 (41%), Positives = 37/74 (50%), Gaps = 14/74 (18%)
Query: 2 NAILNKNSADTK--RCKLYTSLFPCNECAKVIIQSGIKEVIYMCDKHK---------QKP 50
NAI N + T C LY + FPC +CA+ IIQ+GI EV DK K Q+
Sbjct: 72 NAIYNASYTGTSLDGCALYVTHFPCCDCARAIIQAGIAEV--FVDKSKLTADFLERWQQD 129
Query: 51 ATIASKRMFDAAKV 64
TI S MF A V
Sbjct: 130 MTI-STEMFGEAGV 142
>gi|147671596|ref|YP_001215236.1| putative deoxycytidylate deaminase [Vibrio cholerae O395]
gi|153822471|ref|ZP_01975138.1| deoxycytidylate deaminase, putative [Vibrio cholerae B33]
gi|254849997|ref|ZP_05239347.1| deoxycytidylate deaminase [Vibrio cholerae MO10]
gi|297580143|ref|ZP_06942070.1| conserved hypothetical protein [Vibrio cholerae RC385]
gi|298499626|ref|ZP_07009432.1| conserved hypothetical protein [Vibrio cholerae MAK 757]
gi|126519994|gb|EAZ77217.1| deoxycytidylate deaminase, putative [Vibrio cholerae B33]
gi|146313979|gb|ABQ18519.1| putative deoxycytidylate deaminase [Vibrio cholerae O395]
gi|254845702|gb|EET24116.1| deoxycytidylate deaminase [Vibrio cholerae MO10]
gi|297535789|gb|EFH74623.1| conserved hypothetical protein [Vibrio cholerae RC385]
gi|297541607|gb|EFH77658.1| conserved hypothetical protein [Vibrio cholerae MAK 757]
Length = 166
Score = 81.6 bits (200), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 49/111 (44%), Positives = 62/111 (55%), Gaps = 3/111 (2%)
Query: 86 DDVLEWHEYFMASAFLVAKRSKDPVTRVGAVIVNEDNKIVGTGYNGMPIGCSDDEFPWDK 145
D + +W + F A LV SKDP T+VGAVI + N+IV G+NG P G SD D+
Sbjct: 5 DMISKWAQRFFQMAELVGSWSKDPSTQVGAVITKQ-NRIVSVGFNGYPHGISDSASTDDR 63
Query: 146 NTHDELDMCHAEMNAILNKNSADTKRCKLYTSLFPCNECAKVIIQSGIKEV 196
+ L HAE NAIL D C++Y + FPC CA IIQ+GI V
Sbjct: 64 DM-KYLKTLHAEENAILFAKR-DLDGCEIYVTHFPCPNCAAKIIQTGISAV 112
>gi|127513983|ref|YP_001095180.1| zinc-binding CMP/dCMP deaminase [Shewanella loihica PV-4]
gi|126639278|gb|ABO24921.1| CMP/dCMP deaminase, zinc-binding [Shewanella loihica PV-4]
Length = 149
Score = 81.6 bits (200), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 49/107 (45%), Positives = 61/107 (57%), Gaps = 3/107 (2%)
Query: 90 EWHEYFMASAFLVAKRSKDPVTRVGAVIVNEDNKIVGTGYNGMPIGCSDDEFPWDKNTHD 149
+W F+ A LVA SKDP T+VGAVI E+N+IV G+NG P G SD D
Sbjct: 4 KWAIRFLQMAELVASWSKDPSTQVGAVI-TENNRIVSLGFNGYPHGISDSAET-DNREMK 61
Query: 150 ELDMCHAEMNAILNKNSADTKRCKLYTSLFPCNECAKVIIQSGIKEV 196
L HAE NAIL D C+++ + FPC CA IIQ+G+K V
Sbjct: 62 LLKTLHAEENAILYAKR-DLSSCEIWVTHFPCPNCAAKIIQTGLKVV 107
Score = 37.0 bits (84), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 23/63 (36%), Positives = 31/63 (49%), Gaps = 7/63 (11%)
Query: 2 NAILNKNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIYMCDKHKQKPATIASKRMFDA 61
NAIL D C+++ + FPC CA IIQ+G+K V H +P+ R D
Sbjct: 71 NAILYAKR-DLSSCEIWVTHFPCPNCAAKIIQTGLKVV------HSPQPSDDFLSRWGDK 123
Query: 62 AKV 64
KV
Sbjct: 124 IKV 126
>gi|153817018|ref|ZP_01969685.1| deoxycytidylate deaminase, putative [Vibrio cholerae NCTC 8457]
gi|126512428|gb|EAZ75022.1| deoxycytidylate deaminase, putative [Vibrio cholerae NCTC 8457]
Length = 166
Score = 81.6 bits (200), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 49/111 (44%), Positives = 62/111 (55%), Gaps = 3/111 (2%)
Query: 86 DDVLEWHEYFMASAFLVAKRSKDPVTRVGAVIVNEDNKIVGTGYNGMPIGCSDDEFPWDK 145
D + +W + F A LV SKDP T+VGAVI + N+IV G+NG P G SD D+
Sbjct: 5 DMISKWAQRFFQMAELVGSWSKDPSTQVGAVITKQ-NRIVSVGFNGYPHGISDSASTDDR 63
Query: 146 NTHDELDMCHAEMNAILNKNSADTKRCKLYTSLFPCNECAKVIIQSGIKEV 196
+ L HAE NAIL D C++Y + FPC CA IIQ+GI V
Sbjct: 64 DMK-YLKTLHAEENAILFAKR-DLDGCEIYVTHFPCPNCAAKIIQTGISAV 112
>gi|257076159|ref|ZP_05570520.1| deaminase [Ferroplasma acidarmanus fer1]
Length = 172
Score = 81.6 bits (200), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 49/119 (41%), Positives = 64/119 (53%), Gaps = 12/119 (10%)
Query: 91 WHEYFMASAFLVAKRSKDPVTRVGAVIVNEDNKIVGTGYNGMP--------IGCSDDEFP 142
W EYFM A+L A RS +VGAVIV DN ++ TGYNG P +GC DE
Sbjct: 10 WDEYFMRMAYLAASRSNCTRRKVGAVIV-RDNNVLATGYNGPPSHTVNCDIVGCIRDELN 68
Query: 143 WDKNTHDEL-DMCHAEMNAILNK--NSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIY 198
EL HAE NAI+ N + K K+Y + PC C+K+I+ S I+E+I+
Sbjct: 69 VPSGERHELCRGLHAEQNAIIQAAVNGSSIKGSKIYVTTHPCVVCSKMIMNSSIEEIIF 127
>gi|312866406|ref|ZP_07726624.1| putative ComE operon protein 2 [Streptococcus downei F0415]
gi|311098100|gb|EFQ56326.1| putative ComE operon protein 2 [Streptococcus downei F0415]
Length = 151
Score = 81.3 bits (199), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 48/119 (40%), Positives = 70/119 (58%), Gaps = 10/119 (8%)
Query: 89 LEWHEYFMASAFLVAKRSKDPVTRVGAVIVNEDNKIVGTGYNGMPIGCSDDEFPWDKNTH 148
L W +YFMA+A L++KRS VGAV+V +D +I+ TGYNG G S+ + + +
Sbjct: 6 LSWQDYFMANAELISKRSTCDRAYVGAVLV-KDKRIIATGYNG---GVSETDNCNEVGHY 61
Query: 149 DELDMC----HAEMNAILN--KNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIYMCD 201
E C HAEMNA++ K TK ++Y + FPC C K ++Q+GIK++ Y D
Sbjct: 62 MEDGHCIRTVHAEMNALIQCAKEGISTKNTEIYVTHFPCINCTKALLQAGIKKITYKAD 120
Score = 42.4 bits (98), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 25/84 (29%), Positives = 42/84 (50%), Gaps = 15/84 (17%)
Query: 1 MNAILN--KNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIYMCDKHKQKPATIASKRM 58
MNA++ K TK ++Y + FPC C K ++Q+GIK++ Y D +P +A + M
Sbjct: 75 MNALIQCAKEGISTKNTEIYVTHFPCINCTKALLQAGIKKITYKAD---YRPNALAIELM 131
Query: 59 FDAAKVHYWSEMDKMNGVQNGSPH 82
E ++ +Q+ PH
Sbjct: 132 ----------EQKGVDYIQHDVPH 145
>gi|171779275|ref|ZP_02920246.1| hypothetical protein STRINF_01123 [Streptococcus infantarius subsp.
infantarius ATCC BAA-102]
gi|171282331|gb|EDT47758.1| putative ComE operon protein 2 [Streptococcus infantarius subsp.
infantarius ATCC BAA-102]
Length = 154
Score = 81.3 bits (199), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 48/116 (41%), Positives = 69/116 (59%), Gaps = 10/116 (8%)
Query: 89 LEWHEYFMASAFLVAKRSKDPVTRVGAVIVNEDNKIVGTGYNGMPIGCSDDEFPWDKNTH 148
L W +YFMA+A L++KRS VGAV+V +DN+I+ TGYNG G S+ + +
Sbjct: 5 LSWEDYFMANAELISKRSTCDRAFVGAVLV-KDNRIIATGYNG---GVSETDNCSEAGHK 60
Query: 149 DELDMC----HAEMNAILN--KNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIY 198
E C HAEMNA++ K TK ++Y + FPC C K ++Q+GIK++ Y
Sbjct: 61 MEDGHCIRTVHAEMNALIQCAKEGISTKGTEIYVTHFPCINCTKALLQAGIKKITY 116
Score = 39.7 bits (91), Expect = 0.72, Method: Compositional matrix adjust.
Identities = 17/43 (39%), Positives = 27/43 (62%), Gaps = 2/43 (4%)
Query: 1 MNAILN--KNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIY 41
MNA++ K TK ++Y + FPC C K ++Q+GIK++ Y
Sbjct: 74 MNALIQCAKEGISTKGTEIYVTHFPCINCTKALLQAGIKKITY 116
>gi|212555304|gb|ACJ27758.1| Cytidine/deoxycytidylate deaminase, zinc-binding region [Shewanella
piezotolerans WP3]
Length = 146
Score = 81.3 bits (199), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 48/107 (44%), Positives = 60/107 (56%), Gaps = 3/107 (2%)
Query: 90 EWHEYFMASAFLVAKRSKDPVTRVGAVIVNEDNKIVGTGYNGMPIGCSDDEFPWDKNTHD 149
+W F+ A LVA SKDP T+VGAVI E+N+IV G+NG P G SD D
Sbjct: 4 KWATRFLQMAELVASWSKDPSTQVGAVI-TENNRIVSLGFNGYPHGVSDSAET-DNREMK 61
Query: 150 ELDMCHAEMNAILNKNSADTKRCKLYTSLFPCNECAKVIIQSGIKEV 196
L HAE NAIL D C+++ + FPC CA IIQ+G+ V
Sbjct: 62 LLKTLHAEENAILYAKR-DLSGCEIWVTHFPCPNCAAKIIQTGLSTV 107
>gi|407774884|ref|ZP_11122181.1| deoxycytidylate deaminase [Thalassospira profundimaris WP0211]
gi|407282366|gb|EKF07925.1| deoxycytidylate deaminase [Thalassospira profundimaris WP0211]
Length = 157
Score = 81.3 bits (199), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 44/109 (40%), Positives = 58/109 (53%), Gaps = 2/109 (1%)
Query: 90 EWHEYFMASAFLVAKRSKDPVTRVGAVIVNEDNKIVGTGYNGMPIGCSDDEFPWDKNTHD 149
+WH F+ A +A SKD T+VGAV++ +I GYNG P G D+ +
Sbjct: 3 KWHHRFLGLAAHIADWSKDRSTQVGAVVIGPKKEIRAVGYNGFPRGVDDEVESRHQRPEK 62
Query: 150 ELDMCHAEMNAILNKNSADTK--RCKLYTSLFPCNECAKVIIQSGIKEV 196
HAE NAI N + T C LY + FPC +CA+ IIQ+GI EV
Sbjct: 63 YAYTEHAERNAIYNASYTGTSLDGCALYVTHFPCCDCARAIIQAGIAEV 111
Score = 42.7 bits (99), Expect = 0.079, Method: Compositional matrix adjust.
Identities = 24/51 (47%), Positives = 29/51 (56%), Gaps = 4/51 (7%)
Query: 2 NAILNKNSADTK--RCKLYTSLFPCNECAKVIIQSGIKEVIYMCDKHKQKP 50
NAI N + T C LY + FPC +CA+ IIQ+GI EV DK K P
Sbjct: 72 NAIYNASYTGTSLDGCALYVTHFPCCDCARAIIQAGIAEV--YVDKSKLTP 120
>gi|379705940|ref|YP_005204399.1| competence protein ComEB required for DNA binding and uptake
[Streptococcus infantarius subsp. infantarius CJ18]
gi|374682639|gb|AEZ62928.1| competence protein ComEB required for DNA binding and uptake
[Streptococcus infantarius subsp. infantarius CJ18]
Length = 154
Score = 81.3 bits (199), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 48/116 (41%), Positives = 69/116 (59%), Gaps = 10/116 (8%)
Query: 89 LEWHEYFMASAFLVAKRSKDPVTRVGAVIVNEDNKIVGTGYNGMPIGCSDDEFPWDKNTH 148
L W +YFMA+A L++KRS VGAV+V +DN+I+ TGYNG G S+ + +
Sbjct: 5 LSWEDYFMANAELISKRSTCDRAFVGAVLV-KDNRIIATGYNG---GVSETDNCSEAGHK 60
Query: 149 DELDMC----HAEMNAILN--KNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIY 198
E C HAEMNA++ K TK ++Y + FPC C K ++Q+GIK++ Y
Sbjct: 61 MEDGHCIRTVHAEMNALIQCAKEGISTKGTEIYVTHFPCINCTKALLQAGIKKITY 116
Score = 39.7 bits (91), Expect = 0.74, Method: Compositional matrix adjust.
Identities = 17/43 (39%), Positives = 27/43 (62%), Gaps = 2/43 (4%)
Query: 1 MNAILN--KNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIY 41
MNA++ K TK ++Y + FPC C K ++Q+GIK++ Y
Sbjct: 74 MNALIQCAKEGISTKGTEIYVTHFPCINCTKALLQAGIKKITY 116
>gi|260777313|ref|ZP_05886207.1| putative deoxycytidylate deaminase [Vibrio coralliilyticus ATCC
BAA-450]
gi|260606979|gb|EEX33253.1| putative deoxycytidylate deaminase [Vibrio coralliilyticus ATCC
BAA-450]
Length = 150
Score = 81.3 bits (199), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 47/109 (43%), Positives = 60/109 (55%), Gaps = 3/109 (2%)
Query: 88 VLEWHEYFMASAFLVAKRSKDPVTRVGAVIVNEDNKIVGTGYNGMPIGCSDDEFPWDKNT 147
+ +W + F A LV SKDP T+VGAVI + N+IV G+NG P G SD D+
Sbjct: 2 ISKWAQRFYQMAVLVGSWSKDPSTQVGAVITKQ-NRIVSVGFNGYPHGISDSAMT-DERE 59
Query: 148 HDELDMCHAEMNAILNKNSADTKRCKLYTSLFPCNECAKVIIQSGIKEV 196
L HAE NAIL D C+++ + FPC CA IIQ+GI V
Sbjct: 60 MKYLKTLHAEENAILFAKR-DLDGCEIWVTHFPCPNCAAKIIQTGISAV 107
>gi|126699509|ref|YP_001088406.1| dCMP deaminase [Clostridium difficile 630]
gi|254975491|ref|ZP_05271963.1| putative phage-related deoxycytidylate deaminase (putative late
competence protein) [Clostridium difficile QCD-66c26]
gi|255092879|ref|ZP_05322357.1| putative phage-related deoxycytidylate deaminase (putative late
competence protein) [Clostridium difficile CIP 107932]
gi|255306890|ref|ZP_05351061.1| putative phage-related deoxycytidylate deaminase (putative late
competence protein) [Clostridium difficile ATCC 43255]
gi|255314620|ref|ZP_05356203.1| putative phage-related deoxycytidylate deaminase (putative late
competence protein) [Clostridium difficile QCD-76w55]
gi|255517294|ref|ZP_05384970.1| putative phage-related deoxycytidylate deaminase (putative late
competence protein) [Clostridium difficile QCD-97b34]
gi|255650401|ref|ZP_05397303.1| putative phage-related deoxycytidylate deaminase (putative late
competence protein) [Clostridium difficile QCD-37x79]
gi|306520380|ref|ZP_07406727.1| putative phage-related deoxycytidylate deaminase (putative late
competence protein) [Clostridium difficile QCD-32g58]
gi|384361132|ref|YP_006198984.1| phage-related deoxycytidylate deaminase ( late competence protein)
[Clostridium difficile BI1]
gi|115250946|emb|CAJ68774.1| putative dCMP deaminase [Clostridium difficile 630]
Length = 145
Score = 81.3 bits (199), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 48/121 (39%), Positives = 63/121 (52%), Gaps = 7/121 (5%)
Query: 83 KRVDDVLEWHEYFMASAFLVAKRSKDPVTRVGAVIVNEDNKIVGTGYNGMPIG---CSDD 139
K++++ W EYFM VA+R VGA+IVN +N+IV TGYNG G CS
Sbjct: 3 KKLENRCSWQEYFMRLCETVAERGTCDRAYVGAIIVNSENRIVSTGYNGSISGDKHCS-- 60
Query: 140 EFPWDKNTHDELDMCHAEMNAIL--NKNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVI 197
E + + HAE NA+ K K C +Y + FPC C K IIQ+GIK +
Sbjct: 61 EVGHEMRDGHCIRTIHAEQNALYYCAKEGISVKDCSIYVTHFPCLNCTKAIIQAGIKHIY 120
Query: 198 Y 198
Y
Sbjct: 121 Y 121
Score = 39.3 bits (90), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 16/35 (45%), Positives = 20/35 (57%)
Query: 7 KNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIY 41
K K C +Y + FPC C K IIQ+GIK + Y
Sbjct: 87 KEGISVKDCSIYVTHFPCLNCTKAIIQAGIKHIYY 121
>gi|28901047|ref|NP_800702.1| deoxycytidylate deaminase [Vibrio parahaemolyticus RIMD 2210633]
gi|260362476|ref|ZP_05775409.1| conserved hypothetical protein [Vibrio parahaemolyticus K5030]
gi|260879896|ref|ZP_05892251.1| cytidine/deoxycytidylate deaminase zinc-binding domain protein
[Vibrio parahaemolyticus AN-5034]
gi|260894571|ref|ZP_05903067.1| protein RibG [Vibrio parahaemolyticus Peru-466]
gi|28809560|dbj|BAC62535.1| putative deoxycytidylate deaminase [Vibrio parahaemolyticus RIMD
2210633]
gi|308086410|gb|EFO36105.1| protein RibG [Vibrio parahaemolyticus Peru-466]
gi|308091689|gb|EFO41384.1| cytidine/deoxycytidylate deaminase zinc-binding domain protein
[Vibrio parahaemolyticus AN-5034]
gi|308113341|gb|EFO50881.1| conserved hypothetical protein [Vibrio parahaemolyticus K5030]
Length = 154
Score = 81.3 bits (199), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 49/109 (44%), Positives = 62/109 (56%), Gaps = 3/109 (2%)
Query: 88 VLEWHEYFMASAFLVAKRSKDPVTRVGAVIVNEDNKIVGTGYNGMPIGCSDDEFPWDKNT 147
+ +W + F A LVA SKDP T+VGAVI N+ N+IV G+NG P G S D D+
Sbjct: 2 ISKWAKRFYQMAELVASWSKDPSTQVGAVITNQ-NRIVSVGFNGYPHGVS-DSVDTDERE 59
Query: 148 HDELDMCHAEMNAILNKNSADTKRCKLYTSLFPCNECAKVIIQSGIKEV 196
L HAE NAIL + D C ++ + FPC CA IIQ+GI V
Sbjct: 60 LKYLKTLHAEENAILF-SKRDLDGCDIWVTHFPCPNCAAKIIQTGISRV 107
>gi|145219913|ref|YP_001130622.1| zinc-binding CMP/dCMP deaminase [Chlorobium phaeovibrioides DSM
265]
gi|145206077|gb|ABP37120.1| CMP/dCMP deaminase, zinc-binding protein [Chlorobium
phaeovibrioides DSM 265]
Length = 180
Score = 81.3 bits (199), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 50/136 (36%), Positives = 72/136 (52%), Gaps = 13/136 (9%)
Query: 75 GVQNGSPHKRVDDVLEWHEYFMASAFLVAKRSKDPVTRVGAVIVNEDNKIVGTGYNGMPI 134
G + G H + L WHEYFM+ A L+++R+ +GAVIV DN I+ TGYNG P
Sbjct: 12 GGEVGDGHCEQEKRLGWHEYFMSVARLISQRATCTRGHIGAVIV-RDNNILSTGYNGAPS 70
Query: 135 G---CSDDEFPWDKNTHDE-------LDMCHAEMNAILN--KNSADTKRCKLYTSLFPCN 182
G C++ ++TH + ++ HAE+NAI K+ K +Y + PC
Sbjct: 71 GLPHCNETNCRIYRSTHPDGTVEENCVNTIHAEINAIAQAAKHGVSIKDADIYITASPCI 130
Query: 183 ECAKVIIQSGIKEVIY 198
C KV+I GIK + Y
Sbjct: 131 HCLKVLINVGIKTIYY 146
>gi|260683514|ref|YP_003214799.1| phage-related deoxycytidylate deaminase [Clostridium difficile
CD196]
gi|260687174|ref|YP_003218308.1| phage-related deoxycytidylate deaminase ( late competence protein)
[Clostridium difficile R20291]
gi|423082607|ref|ZP_17071196.1| ComE operon protein 2 family protein [Clostridium difficile
002-P50-2011]
gi|423087098|ref|ZP_17075488.1| ComE operon protein 2 family protein [Clostridium difficile
050-P50-2011]
gi|260209677|emb|CBA63397.1| putative phage-related deoxycytidylate deaminase (putative late
competence protein) [Clostridium difficile CD196]
gi|260213191|emb|CBE04662.1| putative phage-related deoxycytidylate deaminase (putative late
competence protein) [Clostridium difficile R20291]
gi|357545347|gb|EHJ27322.1| ComE operon protein 2 family protein [Clostridium difficile
050-P50-2011]
gi|357547725|gb|EHJ29600.1| ComE operon protein 2 family protein [Clostridium difficile
002-P50-2011]
Length = 150
Score = 81.3 bits (199), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 48/121 (39%), Positives = 63/121 (52%), Gaps = 7/121 (5%)
Query: 83 KRVDDVLEWHEYFMASAFLVAKRSKDPVTRVGAVIVNEDNKIVGTGYNGMPIG---CSDD 139
K++++ W EYFM VA+R VGA+IVN +N+IV TGYNG G CS
Sbjct: 8 KKLENRCSWQEYFMRLCETVAERGTCDRAYVGAIIVNSENRIVSTGYNGSISGDKHCS-- 65
Query: 140 EFPWDKNTHDELDMCHAEMNAIL--NKNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVI 197
E + + HAE NA+ K K C +Y + FPC C K IIQ+GIK +
Sbjct: 66 EVGHEMRDGHCIRTIHAEQNALYYCAKEGISVKDCSIYVTHFPCLNCTKAIIQAGIKHIY 125
Query: 198 Y 198
Y
Sbjct: 126 Y 126
Score = 39.3 bits (90), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 16/35 (45%), Positives = 20/35 (57%)
Query: 7 KNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIY 41
K K C +Y + FPC C K IIQ+GIK + Y
Sbjct: 92 KEGISVKDCSIYVTHFPCLNCTKAIIQAGIKHIYY 126
>gi|422307035|ref|ZP_16394205.1| cytidine and deoxycytidylate deaminase zinc-binding region family
protein [Vibrio cholerae CP1035(8)]
gi|408624617|gb|EKK97559.1| cytidine and deoxycytidylate deaminase zinc-binding region family
protein [Vibrio cholerae CP1035(8)]
Length = 161
Score = 80.9 bits (198), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 48/109 (44%), Positives = 61/109 (55%), Gaps = 3/109 (2%)
Query: 88 VLEWHEYFMASAFLVAKRSKDPVTRVGAVIVNEDNKIVGTGYNGMPIGCSDDEFPWDKNT 147
+ +W + F A LV SKDP T+VGAVI + N+IV G+NG P G SD D++
Sbjct: 2 ISKWAQRFFQMAELVGSWSKDPSTQVGAVITKQ-NRIVSVGFNGYPHGISDSASTDDRDM 60
Query: 148 HDELDMCHAEMNAILNKNSADTKRCKLYTSLFPCNECAKVIIQSGIKEV 196
L HAE NAIL D C++Y + FPC CA IIQ+GI V
Sbjct: 61 -KYLKTLHAEENAILFAKR-DLDGCEIYVTHFPCPNCAAKIIQTGISAV 107
>gi|329117421|ref|ZP_08246138.1| putative ComE operon protein 2 [Streptococcus parauberis NCFD 2020]
gi|333904403|ref|YP_004478274.1| cytidine and deoxycytidylate deaminase [Streptococcus parauberis
KCTC 11537]
gi|326907826|gb|EGE54740.1| putative ComE operon protein 2 [Streptococcus parauberis NCFD 2020]
gi|333119668|gb|AEF24602.1| cytidine and deoxycytidylate deaminase [Streptococcus parauberis
KCTC 11537]
gi|456369554|gb|EMF48454.1| dCMP deaminase [Streptococcus parauberis KRS-02109]
gi|457094658|gb|EMG25177.1| dCMP deaminase [Streptococcus parauberis KRS-02083]
Length = 153
Score = 80.9 bits (198), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 47/118 (39%), Positives = 69/118 (58%), Gaps = 6/118 (5%)
Query: 85 VDDVLEWHEYFMASAFLVAKRSKDPVTRVGAVIVNEDNKIVGTGYNGMPIGCSD--DEFP 142
+++ L W +YFMA+A L++KRS VGAV+V +DN+I+ TGYNG + +D DE
Sbjct: 1 MEERLSWQDYFMANAELISKRSTCDRAYVGAVLV-KDNRIIATGYNG-GVSATDNCDEAG 58
Query: 143 WDKNTHDELDMCHAEMNAILN--KNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIY 198
+ HAEMNA++ K T +LY + FPC C K ++Q+GIK + Y
Sbjct: 59 HYMEDGHCIRTVHAEMNALIQCAKEGISTAGTELYVTHFPCINCTKALLQAGIKAITY 116
Score = 38.5 bits (88), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 21/60 (35%), Positives = 31/60 (51%), Gaps = 5/60 (8%)
Query: 1 MNAILN--KNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIYMCDKHKQKPATIASKRM 58
MNA++ K T +LY + FPC C K ++Q+GIK + Y K +P A + M
Sbjct: 74 MNALIQCAKEGISTAGTELYVTHFPCINCTKALLQAGIKAITY---KAHYRPHPFAIELM 130
>gi|15601595|ref|NP_233226.1| deoxycytidylate deaminase [Vibrio cholerae O1 biovar El Tor str.
N16961]
gi|121588185|ref|ZP_01677930.1| deoxycytidylate deaminase, putative [Vibrio cholerae 2740-80]
gi|121729861|ref|ZP_01682290.1| deoxycytidylate deaminase, putative [Vibrio cholerae V52]
gi|153802745|ref|ZP_01957331.1| deoxycytidylate deaminase, putative [Vibrio cholerae MZO-3]
gi|153829488|ref|ZP_01982155.1| putative deoxycytidylate deaminase [Vibrio cholerae 623-39]
gi|227120038|ref|YP_002821933.1| putative deoxycytidylate deaminase [Vibrio cholerae O395]
gi|227812406|ref|YP_002812416.1| putative deoxycytidylate deaminase [Vibrio cholerae M66-2]
gi|229506010|ref|ZP_04395519.1| deoxycytidylate deaminase [Vibrio cholerae BX 330286]
gi|229510134|ref|ZP_04399614.1| deoxycytidylate deaminase [Vibrio cholerae B33]
gi|229514270|ref|ZP_04403731.1| deoxycytidylate deaminase [Vibrio cholerae TMA 21]
gi|229517736|ref|ZP_04407181.1| deoxycytidylate deaminase [Vibrio cholerae RC9]
gi|229522385|ref|ZP_04411801.1| deoxycytidylate deaminase [Vibrio cholerae TM 11079-80]
gi|229526654|ref|ZP_04416058.1| deoxycytidylate deaminase [Vibrio cholerae bv. albensis VL426]
gi|229528303|ref|ZP_04417694.1| deoxycytidylate deaminase [Vibrio cholerae 12129(1)]
gi|229605541|ref|YP_002876245.1| deoxycytidylate deaminase [Vibrio cholerae MJ-1236]
gi|254284476|ref|ZP_04959443.1| deoxycytidylate deaminase, putative [Vibrio cholerae AM-19226]
gi|255746409|ref|ZP_05420356.1| deoxycytidylate deaminase [Vibrio cholera CIRS 101]
gi|262158237|ref|ZP_06029354.1| deoxycytidylate deaminase [Vibrio cholerae INDRE 91/1]
gi|262169113|ref|ZP_06036806.1| deoxycytidylate deaminase [Vibrio cholerae RC27]
gi|262191582|ref|ZP_06049763.1| deoxycytidylate deaminase [Vibrio cholerae CT 5369-93]
gi|360037739|ref|YP_004939501.1| dCMP deaminase [Vibrio cholerae O1 str. 2010EL-1786]
gi|379744241|ref|YP_005335293.1| deoxycytidylate deaminase [Vibrio cholerae IEC224]
gi|384423130|ref|YP_005632489.1| dCMP deaminase [Vibrio cholerae LMA3984-4]
gi|417811789|ref|ZP_12458450.1| cytidine and deoxycytidylate deaminase zinc-binding region family
protein [Vibrio cholerae HC-49A2]
gi|417816909|ref|ZP_12463539.1| cytidine and deoxycytidylate deaminase zinc-binding region family
protein [Vibrio cholerae HCUF01]
gi|417819824|ref|ZP_12466439.1| cytidine and deoxycytidylate deaminase zinc-binding region family
protein [Vibrio cholerae HE39]
gi|417823244|ref|ZP_12469842.1| cytidine and deoxycytidylate deaminase zinc-binding region family
protein [Vibrio cholerae HE48]
gi|418330395|ref|ZP_12941376.1| cytidine and deoxycytidylate deaminase zinc-binding region family
protein [Vibrio cholerae HC-06A1]
gi|418337807|ref|ZP_12946702.1| cytidine and deoxycytidylate deaminase zinc-binding region family
protein [Vibrio cholerae HC-23A1]
gi|418341931|ref|ZP_12948761.1| cytidine and deoxycytidylate deaminase zinc-binding region family
protein [Vibrio cholerae HC-28A1]
gi|418349482|ref|ZP_12954214.1| cytidine and deoxycytidylate deaminase zinc-binding region family
protein [Vibrio cholerae HC-43A1]
gi|418353787|ref|ZP_12956512.1| cytidine and deoxycytidylate deaminase zinc-binding region family
protein [Vibrio cholerae HC-61A1]
gi|419826202|ref|ZP_14349705.1| cytidine and deoxycytidylate deaminase zinc-binding region family
protein [Vibrio cholerae CP1033(6)]
gi|419828520|ref|ZP_14352011.1| cytidine and deoxycytidylate deaminase zinc-binding region family
protein [Vibrio cholerae HC-1A2]
gi|419833443|ref|ZP_14356904.1| cytidine and deoxycytidylate deaminase zinc-binding region family
protein [Vibrio cholerae HC-61A2]
gi|419836565|ref|ZP_14360005.1| cytidine and deoxycytidylate deaminase zinc-binding region family
protein [Vibrio cholerae HC-46B1]
gi|421317218|ref|ZP_15767788.1| cytidine and deoxycytidylate deaminase zinc-binding region family
protein [Vibrio cholerae CP1032(5)]
gi|421320147|ref|ZP_15770705.1| cytidine and deoxycytidylate deaminase zinc-binding region family
protein [Vibrio cholerae CP1038(11)]
gi|421324188|ref|ZP_15774715.1| cytidine and deoxycytidylate deaminase zinc-binding region family
protein [Vibrio cholerae CP1041(14)]
gi|421327160|ref|ZP_15777678.1| cytidine and deoxycytidylate deaminase zinc-binding region family
protein [Vibrio cholerae CP1042(15)]
gi|421332250|ref|ZP_15782729.1| cytidine and deoxycytidylate deaminase zinc-binding region family
protein [Vibrio cholerae CP1046(19)]
gi|421335889|ref|ZP_15786352.1| cytidine and deoxycytidylate deaminase zinc-binding region family
protein [Vibrio cholerae CP1048(21)]
gi|421339766|ref|ZP_15790200.1| cytidine and deoxycytidylate deaminase zinc-binding region family
protein [Vibrio cholerae HC-20A2]
gi|421343385|ref|ZP_15793789.1| cytidine and deoxycytidylate deaminase zinc-binding region family
protein [Vibrio cholerae HC-43B1]
gi|421346024|ref|ZP_15796408.1| cytidine and deoxycytidylate deaminase zinc-binding region family
protein [Vibrio cholerae HC-46A1]
gi|421355753|ref|ZP_15806084.1| cytidine and deoxycytidylate deaminase zinc-binding region family
protein [Vibrio cholerae HE-45]
gi|422889761|ref|ZP_16932229.1| cytidine and deoxycytidylate deaminase zinc-binding region family
protein [Vibrio cholerae HC-40A1]
gi|422898668|ref|ZP_16935956.1| cytidine and deoxycytidylate deaminase zinc-binding region family
protein [Vibrio cholerae HC-48A1]
gi|422904717|ref|ZP_16939609.1| cytidine and deoxycytidylate deaminase zinc-binding region family
protein [Vibrio cholerae HC-70A1]
gi|422910160|ref|ZP_16944801.1| cytidine and deoxycytidylate deaminase zinc-binding region family
protein [Vibrio cholerae HE-09]
gi|422915064|ref|ZP_16949513.1| cytidine and deoxycytidylate deaminase zinc-binding region family
protein [Vibrio cholerae HFU-02]
gi|422920247|ref|ZP_16953577.1| cytidine and deoxycytidylate deaminase zinc-binding region family
protein [Vibrio cholerae HC-02A1]
gi|422921013|ref|ZP_16954270.1| cytidine and deoxycytidylate deaminase zinc-binding region family
protein [Vibrio cholerae BJG-01]
gi|422927725|ref|ZP_16960669.1| cytidine and deoxycytidylate deaminase zinc-binding region family
protein [Vibrio cholerae HC-38A1]
gi|423146796|ref|ZP_17134284.1| cytidine and deoxycytidylate deaminase zinc-binding region family
protein [Vibrio cholerae HC-19A1]
gi|423147786|ref|ZP_17135164.1| cytidine and deoxycytidylate deaminase zinc-binding region family
protein [Vibrio cholerae HC-21A1]
gi|423151574|ref|ZP_17138805.1| cytidine and deoxycytidylate deaminase zinc-binding region family
protein [Vibrio cholerae HC-22A1]
gi|423158199|ref|ZP_17145212.1| cytidine and deoxycytidylate deaminase zinc-binding region family
protein [Vibrio cholerae HC-32A1]
gi|423163097|ref|ZP_17149917.1| cytidine and deoxycytidylate deaminase zinc-binding region family
protein [Vibrio cholerae HC-48B2]
gi|423732956|ref|ZP_17706199.1| cytidine and deoxycytidylate deaminase zinc-binding region family
protein [Vibrio cholerae HC-17A1]
gi|423734918|ref|ZP_17708129.1| cytidine and deoxycytidylate deaminase zinc-binding region family
protein [Vibrio cholerae HC-41B1]
gi|423741921|ref|ZP_17710699.1| cytidine and deoxycytidylate deaminase zinc-binding region family
protein [Vibrio cholerae HC-50A2]
gi|423810567|ref|ZP_17714618.1| cytidine and deoxycytidylate deaminase zinc-binding region family
protein [Vibrio cholerae HC-55C2]
gi|423844462|ref|ZP_17718353.1| cytidine and deoxycytidylate deaminase zinc-binding region family
protein [Vibrio cholerae HC-59A1]
gi|423875386|ref|ZP_17722024.1| cytidine and deoxycytidylate deaminase zinc-binding region family
protein [Vibrio cholerae HC-60A1]
gi|423910352|ref|ZP_17728340.1| cytidine and deoxycytidylate deaminase zinc-binding region family
protein [Vibrio cholerae HC-62A1]
gi|423919422|ref|ZP_17729252.1| cytidine and deoxycytidylate deaminase zinc-binding region family
protein [Vibrio cholerae HC-77A1]
gi|423941376|ref|ZP_17732941.1| cytidine and deoxycytidylate deaminase zinc-binding region family
protein [Vibrio cholerae HE-40]
gi|423973128|ref|ZP_17736486.1| cytidine and deoxycytidylate deaminase zinc-binding region family
protein [Vibrio cholerae HE-46]
gi|423999865|ref|ZP_17743028.1| cytidine and deoxycytidylate deaminase zinc-binding region family
protein [Vibrio cholerae HC-02C1]
gi|424002037|ref|ZP_17745122.1| cytidine and deoxycytidylate deaminase zinc-binding region family
protein [Vibrio cholerae HC-17A2]
gi|424004277|ref|ZP_17747283.1| cytidine and deoxycytidylate deaminase zinc-binding region family
protein [Vibrio cholerae HC-37A1]
gi|424009306|ref|ZP_17752246.1| cytidine and deoxycytidylate deaminase zinc-binding region family
protein [Vibrio cholerae HC-44C1]
gi|424011698|ref|ZP_17754543.1| cytidine and deoxycytidylate deaminase zinc-binding region family
protein [Vibrio cholerae HC-55B2]
gi|424021525|ref|ZP_17761278.1| cytidine and deoxycytidylate deaminase zinc-binding region family
protein [Vibrio cholerae HC-59B1]
gi|424022208|ref|ZP_17761891.1| cytidine and deoxycytidylate deaminase zinc-binding region family
protein [Vibrio cholerae HC-62B1]
gi|424028992|ref|ZP_17768543.1| cytidine and deoxycytidylate deaminase zinc-binding region family
protein [Vibrio cholerae HC-69A1]
gi|424588478|ref|ZP_18027974.1| cytidine and deoxycytidylate deaminase zinc-binding region family
protein [Vibrio cholerae CP1030(3)]
gi|424589221|ref|ZP_18028686.1| cytidine and deoxycytidylate deaminase zinc-binding region family
protein [Vibrio cholerae CP1037(10)]
gi|424593227|ref|ZP_18032586.1| cytidine and deoxycytidylate deaminase zinc-binding region family
protein [Vibrio cholerae CP1040(13)]
gi|424597156|ref|ZP_18036373.1| cytidine and deoxycytidylate deaminase zinc-binding region family
protein [Vibrio Cholerae CP1044(17)]
gi|424603980|ref|ZP_18043031.1| cytidine and deoxycytidylate deaminase zinc-binding region family
protein [Vibrio cholerae CP1047(20)]
gi|424604732|ref|ZP_18043719.1| cytidine and deoxycytidylate deaminase zinc-binding region family
protein [Vibrio cholerae CP1050(23)]
gi|424608559|ref|ZP_18047437.1| cytidine and deoxycytidylate deaminase zinc-binding region family
protein [Vibrio cholerae HC-39A1]
gi|424615332|ref|ZP_18054048.1| cytidine and deoxycytidylate deaminase zinc-binding region family
protein [Vibrio cholerae HC-41A1]
gi|424619181|ref|ZP_18057786.1| cytidine and deoxycytidylate deaminase zinc-binding region family
protein [Vibrio cholerae HC-42A1]
gi|424620099|ref|ZP_18058647.1| cytidine and deoxycytidylate deaminase zinc-binding region family
protein [Vibrio cholerae HC-47A1]
gi|424626935|ref|ZP_18065356.1| cytidine and deoxycytidylate deaminase zinc-binding region family
protein [Vibrio cholerae HC-50A1]
gi|424627827|ref|ZP_18066160.1| cytidine and deoxycytidylate deaminase zinc-binding region family
protein [Vibrio cholerae HC-51A1]
gi|424631627|ref|ZP_18069820.1| cytidine and deoxycytidylate deaminase zinc-binding region family
protein [Vibrio cholerae HC-52A1]
gi|424638543|ref|ZP_18076510.1| cytidine and deoxycytidylate deaminase zinc-binding region family
protein [Vibrio cholerae HC-55A1]
gi|424642345|ref|ZP_18080187.1| cytidine and deoxycytidylate deaminase zinc-binding region family
protein [Vibrio cholerae HC-56A1]
gi|424642725|ref|ZP_18080503.1| cytidine and deoxycytidylate deaminase zinc-binding region family
protein [Vibrio cholerae HC-56A2]
gi|424646953|ref|ZP_18084652.1| cytidine and deoxycytidylate deaminase zinc-binding region family
protein [Vibrio cholerae HC-57A1]
gi|424650839|ref|ZP_18088385.1| cytidine and deoxycytidylate deaminase zinc-binding region family
protein [Vibrio cholerae HC-57A2]
gi|424654622|ref|ZP_18091940.1| cytidine and deoxycytidylate deaminase zinc-binding region family
protein [Vibrio cholerae HC-81A2]
gi|424659027|ref|ZP_18096278.1| cytidine and deoxycytidylate deaminase zinc-binding region family
protein [Vibrio cholerae HE-16]
gi|429886991|ref|ZP_19368524.1| dCMP deaminase [Vibrio cholerae PS15]
gi|440711516|ref|ZP_20892157.1| deoxycytidylate deaminase [Vibrio cholerae 4260B]
gi|443505584|ref|ZP_21072473.1| cytidine and deoxycytidylate deaminase zinc-binding region family
protein [Vibrio cholerae HC-64A1]
gi|443509492|ref|ZP_21076187.1| cytidine and deoxycytidylate deaminase zinc-binding region family
protein [Vibrio cholerae HC-65A1]
gi|443513321|ref|ZP_21079891.1| cytidine and deoxycytidylate deaminase zinc-binding region family
protein [Vibrio cholerae HC-67A1]
gi|443517155|ref|ZP_21083600.1| cytidine and deoxycytidylate deaminase zinc-binding region family
protein [Vibrio cholerae HC-68A1]
gi|443520808|ref|ZP_21087140.1| cytidine and deoxycytidylate deaminase zinc-binding region family
protein [Vibrio cholerae HC-71A1]
gi|443521719|ref|ZP_21087995.1| cytidine and deoxycytidylate deaminase zinc-binding region family
protein [Vibrio cholerae HC-72A2]
gi|443525671|ref|ZP_21091828.1| cytidine and deoxycytidylate deaminase zinc-binding region family
protein [Vibrio cholerae HC-78A1]
gi|443533434|ref|ZP_21099380.1| cytidine and deoxycytidylate deaminase zinc-binding region family
protein [Vibrio cholerae HC-80A1]
gi|443537110|ref|ZP_21102968.1| cytidine and deoxycytidylate deaminase zinc-binding region family
protein [Vibrio cholerae HC-81A1]
gi|449057827|ref|ZP_21736123.1| dCMP deaminase [Vibrio cholerae O1 str. Inaba G4222]
gi|9658270|gb|AAF96738.1| deoxycytidylate deaminase, putative [Vibrio cholerae O1 biovar El
Tor str. N16961]
gi|121547577|gb|EAX57679.1| deoxycytidylate deaminase, putative [Vibrio cholerae 2740-80]
gi|121628394|gb|EAX60893.1| deoxycytidylate deaminase, putative [Vibrio cholerae V52]
gi|124121702|gb|EAY40445.1| deoxycytidylate deaminase, putative [Vibrio cholerae MZO-3]
gi|148875007|gb|EDL73142.1| putative deoxycytidylate deaminase [Vibrio cholerae 623-39]
gi|150425261|gb|EDN17037.1| deoxycytidylate deaminase, putative [Vibrio cholerae AM-19226]
gi|227011548|gb|ACP07759.1| putative deoxycytidylate deaminase [Vibrio cholerae M66-2]
gi|227015488|gb|ACP11697.1| putative deoxycytidylate deaminase [Vibrio cholerae O395]
gi|229334665|gb|EEO00151.1| deoxycytidylate deaminase [Vibrio cholerae 12129(1)]
gi|229336812|gb|EEO01830.1| deoxycytidylate deaminase [Vibrio cholerae bv. albensis VL426]
gi|229340370|gb|EEO05376.1| deoxycytidylate deaminase [Vibrio cholerae TM 11079-80]
gi|229345772|gb|EEO10745.1| deoxycytidylate deaminase [Vibrio cholerae RC9]
gi|229348250|gb|EEO13208.1| deoxycytidylate deaminase [Vibrio cholerae TMA 21]
gi|229352579|gb|EEO17519.1| deoxycytidylate deaminase [Vibrio cholerae B33]
gi|229356361|gb|EEO21279.1| deoxycytidylate deaminase [Vibrio cholerae BX 330286]
gi|229372027|gb|ACQ62449.1| deoxycytidylate deaminase [Vibrio cholerae MJ-1236]
gi|255736163|gb|EET91561.1| deoxycytidylate deaminase [Vibrio cholera CIRS 101]
gi|262022394|gb|EEY41102.1| deoxycytidylate deaminase [Vibrio cholerae RC27]
gi|262029919|gb|EEY48566.1| deoxycytidylate deaminase [Vibrio cholerae INDRE 91/1]
gi|262032547|gb|EEY51104.1| deoxycytidylate deaminase [Vibrio cholerae CT 5369-93]
gi|327485838|gb|AEA80244.1| dCMP deaminase [Vibrio cholerae LMA3984-4]
gi|340040059|gb|EGR01032.1| cytidine and deoxycytidylate deaminase zinc-binding region family
protein [Vibrio cholerae HCUF01]
gi|340040682|gb|EGR01654.1| cytidine and deoxycytidylate deaminase zinc-binding region family
protein [Vibrio cholerae HE39]
gi|340044609|gb|EGR05557.1| cytidine and deoxycytidylate deaminase zinc-binding region family
protein [Vibrio cholerae HC-49A2]
gi|340049374|gb|EGR10290.1| cytidine and deoxycytidylate deaminase zinc-binding region family
protein [Vibrio cholerae HE48]
gi|341627777|gb|EGS53075.1| cytidine and deoxycytidylate deaminase zinc-binding region family
protein [Vibrio cholerae HC-70A1]
gi|341629233|gb|EGS54402.1| cytidine and deoxycytidylate deaminase zinc-binding region family
protein [Vibrio cholerae HC-48A1]
gi|341629457|gb|EGS54613.1| cytidine and deoxycytidylate deaminase zinc-binding region family
protein [Vibrio cholerae HC-40A1]
gi|341631661|gb|EGS56545.1| cytidine and deoxycytidylate deaminase zinc-binding region family
protein [Vibrio cholerae HC-02A1]
gi|341632588|gb|EGS57453.1| cytidine and deoxycytidylate deaminase zinc-binding region family
protein [Vibrio cholerae HFU-02]
gi|341633664|gb|EGS58453.1| cytidine and deoxycytidylate deaminase zinc-binding region family
protein [Vibrio cholerae HE-09]
gi|341643047|gb|EGS67344.1| cytidine and deoxycytidylate deaminase zinc-binding region family
protein [Vibrio cholerae HC-38A1]
gi|341649711|gb|EGS73664.1| cytidine and deoxycytidylate deaminase zinc-binding region family
protein [Vibrio cholerae BJG-01]
gi|356417879|gb|EHH71490.1| cytidine and deoxycytidylate deaminase zinc-binding region family
protein [Vibrio cholerae HC-19A1]
gi|356424106|gb|EHH77526.1| cytidine and deoxycytidylate deaminase zinc-binding region family
protein [Vibrio cholerae HC-06A1]
gi|356424789|gb|EHH78186.1| cytidine and deoxycytidylate deaminase zinc-binding region family
protein [Vibrio cholerae HC-21A1]
gi|356431191|gb|EHH84396.1| cytidine and deoxycytidylate deaminase zinc-binding region family
protein [Vibrio cholerae HC-23A1]
gi|356435684|gb|EHH88834.1| cytidine and deoxycytidylate deaminase zinc-binding region family
protein [Vibrio cholerae HC-32A1]
gi|356436769|gb|EHH89879.1| cytidine and deoxycytidylate deaminase zinc-binding region family
protein [Vibrio cholerae HC-22A1]
gi|356439821|gb|EHH92784.1| cytidine and deoxycytidylate deaminase zinc-binding region family
protein [Vibrio cholerae HC-28A1]
gi|356446344|gb|EHH99144.1| cytidine and deoxycytidylate deaminase zinc-binding region family
protein [Vibrio cholerae HC-43A1]
gi|356454852|gb|EHI07499.1| cytidine and deoxycytidylate deaminase zinc-binding region family
protein [Vibrio cholerae HC-61A1]
gi|356457205|gb|EHI09775.1| cytidine and deoxycytidylate deaminase zinc-binding region family
protein [Vibrio cholerae HC-48B2]
gi|356648893|gb|AET28947.1| dCMP deaminase [Vibrio cholerae O1 str. 2010EL-1786]
gi|378796835|gb|AFC60305.1| putative deoxycytidylate deaminase [Vibrio cholerae IEC224]
gi|395919676|gb|EJH30499.1| cytidine and deoxycytidylate deaminase zinc-binding region family
protein [Vibrio cholerae CP1032(5)]
gi|395922202|gb|EJH33021.1| cytidine and deoxycytidylate deaminase zinc-binding region family
protein [Vibrio cholerae CP1041(14)]
gi|395925035|gb|EJH35837.1| cytidine and deoxycytidylate deaminase zinc-binding region family
protein [Vibrio cholerae CP1038(11)]
gi|395931048|gb|EJH41794.1| cytidine and deoxycytidylate deaminase zinc-binding region family
protein [Vibrio cholerae CP1046(19)]
gi|395934085|gb|EJH44824.1| cytidine and deoxycytidylate deaminase zinc-binding region family
protein [Vibrio cholerae CP1042(15)]
gi|395935571|gb|EJH46306.1| cytidine and deoxycytidylate deaminase zinc-binding region family
protein [Vibrio cholerae CP1048(21)]
gi|395941325|gb|EJH52003.1| cytidine and deoxycytidylate deaminase zinc-binding region family
protein [Vibrio cholerae HC-20A2]
gi|395941952|gb|EJH52629.1| cytidine and deoxycytidylate deaminase zinc-binding region family
protein [Vibrio cholerae HC-43B1]
gi|395947551|gb|EJH58206.1| cytidine and deoxycytidylate deaminase zinc-binding region family
protein [Vibrio cholerae HC-46A1]
gi|395950423|gb|EJH61042.1| cytidine and deoxycytidylate deaminase zinc-binding region family
protein [Vibrio cholerae HE-45]
gi|395954887|gb|EJH65494.1| cytidine and deoxycytidylate deaminase zinc-binding region family
protein [Vibrio cholerae HC-42A1]
gi|395966515|gb|EJH76635.1| cytidine and deoxycytidylate deaminase zinc-binding region family
protein [Vibrio cholerae HC-57A2]
gi|395967239|gb|EJH77338.1| cytidine and deoxycytidylate deaminase zinc-binding region family
protein [Vibrio cholerae HC-56A2]
gi|395968458|gb|EJH78414.1| cytidine and deoxycytidylate deaminase zinc-binding region family
protein [Vibrio cholerae CP1030(3)]
gi|395969293|gb|EJH79179.1| cytidine and deoxycytidylate deaminase zinc-binding region family
protein [Vibrio cholerae CP1047(20)]
gi|395978730|gb|EJH88102.1| cytidine and deoxycytidylate deaminase zinc-binding region family
protein [Vibrio cholerae HC-47A1]
gi|408006399|gb|EKG44550.1| cytidine and deoxycytidylate deaminase zinc-binding region family
protein [Vibrio cholerae HC-41A1]
gi|408007830|gb|EKG45871.1| cytidine and deoxycytidylate deaminase zinc-binding region family
protein [Vibrio cholerae HC-50A1]
gi|408012368|gb|EKG50151.1| cytidine and deoxycytidylate deaminase zinc-binding region family
protein [Vibrio cholerae HC-39A1]
gi|408018640|gb|EKG56074.1| cytidine and deoxycytidylate deaminase zinc-binding region family
protein [Vibrio cholerae HC-55A1]
gi|408019299|gb|EKG56699.1| cytidine and deoxycytidylate deaminase zinc-binding region family
protein [Vibrio cholerae HC-56A1]
gi|408026372|gb|EKG63381.1| cytidine and deoxycytidylate deaminase zinc-binding region family
protein [Vibrio cholerae HC-52A1]
gi|408038217|gb|EKG74571.1| cytidine and deoxycytidylate deaminase zinc-binding region family
protein [Vibrio cholerae CP1037(10)]
gi|408039085|gb|EKG75381.1| cytidine and deoxycytidylate deaminase zinc-binding region family
protein [Vibrio cholerae HC-57A1]
gi|408039626|gb|EKG75898.1| cytidine and deoxycytidylate deaminase zinc-binding region family
protein [Vibrio cholerae CP1040(13)]
gi|408046889|gb|EKG82553.1| cytidine and deoxycytidylate deaminase zinc-binding region family
protein [Vibrio Cholerae CP1044(17)]
gi|408048499|gb|EKG83917.1| cytidine and deoxycytidylate deaminase zinc-binding region family
protein [Vibrio cholerae CP1050(23)]
gi|408053374|gb|EKG88389.1| cytidine and deoxycytidylate deaminase zinc-binding region family
protein [Vibrio cholerae HE-16]
gi|408059251|gb|EKG94020.1| cytidine and deoxycytidylate deaminase zinc-binding region family
protein [Vibrio cholerae HC-81A2]
gi|408060209|gb|EKG94913.1| cytidine and deoxycytidylate deaminase zinc-binding region family
protein [Vibrio cholerae HC-51A1]
gi|408608992|gb|EKK82375.1| cytidine and deoxycytidylate deaminase zinc-binding region family
protein [Vibrio cholerae CP1033(6)]
gi|408616475|gb|EKK89629.1| cytidine and deoxycytidylate deaminase zinc-binding region family
protein [Vibrio cholerae HC-17A1]
gi|408623593|gb|EKK96547.1| cytidine and deoxycytidylate deaminase zinc-binding region family
protein [Vibrio cholerae HC-1A2]
gi|408630371|gb|EKL02968.1| cytidine and deoxycytidylate deaminase zinc-binding region family
protein [Vibrio cholerae HC-41B1]
gi|408637700|gb|EKL09728.1| cytidine and deoxycytidylate deaminase zinc-binding region family
protein [Vibrio cholerae HC-55C2]
gi|408645650|gb|EKL17289.1| cytidine and deoxycytidylate deaminase zinc-binding region family
protein [Vibrio cholerae HC-60A1]
gi|408646605|gb|EKL18192.1| cytidine and deoxycytidylate deaminase zinc-binding region family
protein [Vibrio cholerae HC-50A2]
gi|408646676|gb|EKL18258.1| cytidine and deoxycytidylate deaminase zinc-binding region family
protein [Vibrio cholerae HC-59A1]
gi|408649461|gb|EKL20774.1| cytidine and deoxycytidylate deaminase zinc-binding region family
protein [Vibrio cholerae HC-62A1]
gi|408650767|gb|EKL22042.1| cytidine and deoxycytidylate deaminase zinc-binding region family
protein [Vibrio cholerae HC-61A2]
gi|408661295|gb|EKL32280.1| cytidine and deoxycytidylate deaminase zinc-binding region family
protein [Vibrio cholerae HC-77A1]
gi|408662789|gb|EKL33695.1| cytidine and deoxycytidylate deaminase zinc-binding region family
protein [Vibrio cholerae HE-40]
gi|408666730|gb|EKL37508.1| cytidine and deoxycytidylate deaminase zinc-binding region family
protein [Vibrio cholerae HE-46]
gi|408843965|gb|EKL84104.1| cytidine and deoxycytidylate deaminase zinc-binding region family
protein [Vibrio cholerae HC-02C1]
gi|408847893|gb|EKL87951.1| cytidine and deoxycytidylate deaminase zinc-binding region family
protein [Vibrio cholerae HC-17A2]
gi|408851021|gb|EKL90961.1| cytidine and deoxycytidylate deaminase zinc-binding region family
protein [Vibrio cholerae HC-37A1]
gi|408857115|gb|EKL96803.1| cytidine and deoxycytidylate deaminase zinc-binding region family
protein [Vibrio cholerae HC-46B1]
gi|408862477|gb|EKM01993.1| cytidine and deoxycytidylate deaminase zinc-binding region family
protein [Vibrio cholerae HC-59B1]
gi|408864330|gb|EKM03773.1| cytidine and deoxycytidylate deaminase zinc-binding region family
protein [Vibrio cholerae HC-44C1]
gi|408867402|gb|EKM06763.1| cytidine and deoxycytidylate deaminase zinc-binding region family
protein [Vibrio cholerae HC-55B2]
gi|408872350|gb|EKM11570.1| cytidine and deoxycytidylate deaminase zinc-binding region family
protein [Vibrio cholerae HC-69A1]
gi|408876973|gb|EKM16077.1| cytidine and deoxycytidylate deaminase zinc-binding region family
protein [Vibrio cholerae HC-62B1]
gi|429226076|gb|EKY32236.1| dCMP deaminase [Vibrio cholerae PS15]
gi|439973003|gb|ELP49246.1| deoxycytidylate deaminase [Vibrio cholerae 4260B]
gi|443430028|gb|ELS72649.1| cytidine and deoxycytidylate deaminase zinc-binding region family
protein [Vibrio cholerae HC-64A1]
gi|443433895|gb|ELS80107.1| cytidine and deoxycytidylate deaminase zinc-binding region family
protein [Vibrio cholerae HC-65A1]
gi|443437492|gb|ELS87275.1| cytidine and deoxycytidylate deaminase zinc-binding region family
protein [Vibrio cholerae HC-67A1]
gi|443441314|gb|ELS94682.1| cytidine and deoxycytidylate deaminase zinc-binding region family
protein [Vibrio cholerae HC-68A1]
gi|443445567|gb|ELT02287.1| cytidine and deoxycytidylate deaminase zinc-binding region family
protein [Vibrio cholerae HC-71A1]
gi|443452181|gb|ELT12409.1| cytidine and deoxycytidylate deaminase zinc-binding region family
protein [Vibrio cholerae HC-72A2]
gi|443456003|gb|ELT19713.1| cytidine and deoxycytidylate deaminase zinc-binding region family
protein [Vibrio cholerae HC-78A1]
gi|443463399|gb|ELT34404.1| cytidine and deoxycytidylate deaminase zinc-binding region family
protein [Vibrio cholerae HC-80A1]
gi|443467119|gb|ELT41775.1| cytidine and deoxycytidylate deaminase zinc-binding region family
protein [Vibrio cholerae HC-81A1]
gi|448262918|gb|EMB00165.1| dCMP deaminase [Vibrio cholerae O1 str. Inaba G4222]
Length = 161
Score = 80.9 bits (198), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 48/109 (44%), Positives = 61/109 (55%), Gaps = 3/109 (2%)
Query: 88 VLEWHEYFMASAFLVAKRSKDPVTRVGAVIVNEDNKIVGTGYNGMPIGCSDDEFPWDKNT 147
+ +W + F A LV SKDP T+VGAVI + N+IV G+NG P G SD D++
Sbjct: 2 ISKWAQRFFQMAELVGSWSKDPSTQVGAVITKQ-NRIVSVGFNGYPHGISDSASTDDRDM 60
Query: 148 HDELDMCHAEMNAILNKNSADTKRCKLYTSLFPCNECAKVIIQSGIKEV 196
L HAE NAIL D C++Y + FPC CA IIQ+GI V
Sbjct: 61 -KYLKTLHAEENAILFAKR-DLDGCEIYVTHFPCPNCAAKIIQTGISAV 107
>gi|261212850|ref|ZP_05927134.1| deoxycytidylate deaminase [Vibrio sp. RC341]
gi|260837915|gb|EEX64592.1| deoxycytidylate deaminase [Vibrio sp. RC341]
Length = 161
Score = 80.9 bits (198), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 48/109 (44%), Positives = 61/109 (55%), Gaps = 3/109 (2%)
Query: 88 VLEWHEYFMASAFLVAKRSKDPVTRVGAVIVNEDNKIVGTGYNGMPIGCSDDEFPWDKNT 147
+ +W + F A LV SKDP T+VGAVI + N+IV G+NG P G SD D++
Sbjct: 2 ISKWAQRFFQMAELVGSWSKDPSTQVGAVITKQ-NRIVSVGFNGYPHGISDSASTDDRDM 60
Query: 148 HDELDMCHAEMNAILNKNSADTKRCKLYTSLFPCNECAKVIIQSGIKEV 196
L HAE NAIL D C++Y + FPC CA IIQ+GI V
Sbjct: 61 -KYLKTLHAEENAILFAKR-DLDGCEIYVTHFPCPNCAAKIIQTGIAAV 107
>gi|83591205|ref|YP_431214.1| zinc-binding CMP/dCMP deaminase [Moorella thermoacetica ATCC 39073]
gi|83574119|gb|ABC20671.1| CMP/dCMP deaminase, zinc-binding protein [Moorella thermoacetica
ATCC 39073]
Length = 135
Score = 80.9 bits (198), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 47/110 (42%), Positives = 62/110 (56%), Gaps = 2/110 (1%)
Query: 90 EWHEYFMASAFLVAKRSKDPVTRVGAVIVNEDNKIVGTGYNGMPIGCSD-DEFPWDKNTH 148
EW EYF+ AF VA RS VGAV+V +D +I GTGYNG P G E
Sbjct: 4 EWDEYFLDIAFQVASRSTCNRLAVGAVVV-KDKRIKGTGYNGAPHGLPHCLEVGCLMEGE 62
Query: 149 DELDMCHAEMNAILNKNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIY 198
L HAE+NA+L + + + +Y + +PC CA VI+QSGIK ++Y
Sbjct: 63 HCLRTIHAEINALLECSPEERQGATMYVTDYPCERCALVIVQSGIKRLVY 112
Score = 41.2 bits (95), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 16/41 (39%), Positives = 27/41 (65%)
Query: 1 MNAILNKNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIY 41
+NA+L + + + +Y + +PC CA VI+QSGIK ++Y
Sbjct: 72 INALLECSPEERQGATMYVTDYPCERCALVIVQSGIKRLVY 112
>gi|153825415|ref|ZP_01978082.1| deoxycytidylate deaminase [Vibrio cholerae MZO-2]
gi|254224811|ref|ZP_04918427.1| deoxycytidylate deaminase, putative [Vibrio cholerae V51]
gi|421349371|ref|ZP_15799740.1| cytidine and deoxycytidylate deaminase zinc-binding region family
protein [Vibrio cholerae HE-25]
gi|125622874|gb|EAZ51192.1| deoxycytidylate deaminase, putative [Vibrio cholerae V51]
gi|149740961|gb|EDM55038.1| deoxycytidylate deaminase [Vibrio cholerae MZO-2]
gi|395955988|gb|EJH66582.1| cytidine and deoxycytidylate deaminase zinc-binding region family
protein [Vibrio cholerae HE-25]
Length = 161
Score = 80.9 bits (198), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 48/109 (44%), Positives = 61/109 (55%), Gaps = 3/109 (2%)
Query: 88 VLEWHEYFMASAFLVAKRSKDPVTRVGAVIVNEDNKIVGTGYNGMPIGCSDDEFPWDKNT 147
+ +W + F A LV SKDP T+VGAVI + N+IV G+NG P G SD D++
Sbjct: 2 ISKWAQRFFQMAELVGSWSKDPSTQVGAVITKQ-NRIVSVGFNGYPHGISDSASTDDRDM 60
Query: 148 HDELDMCHAEMNAILNKNSADTKRCKLYTSLFPCNECAKVIIQSGIKEV 196
L HAE NAIL D C++Y + FPC CA IIQ+GI V
Sbjct: 61 -KYLKTLHAEENAILFAKR-DLDGCEIYVTHFPCPNCAAKIIQTGISAV 107
>gi|449146365|ref|ZP_21777149.1| dCMP deaminase [Vibrio mimicus CAIM 602]
gi|449078045|gb|EMB48995.1| dCMP deaminase [Vibrio mimicus CAIM 602]
Length = 160
Score = 80.9 bits (198), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 48/109 (44%), Positives = 61/109 (55%), Gaps = 3/109 (2%)
Query: 88 VLEWHEYFMASAFLVAKRSKDPVTRVGAVIVNEDNKIVGTGYNGMPIGCSDDEFPWDKNT 147
+ +W + F A LV SKDP T+VGAVI + N+IV G+NG P G SD D++
Sbjct: 2 ISKWAQRFFQMAELVGSWSKDPSTQVGAVITKQ-NRIVSVGFNGYPHGISDSASTDDRDM 60
Query: 148 HDELDMCHAEMNAILNKNSADTKRCKLYTSLFPCNECAKVIIQSGIKEV 196
L HAE NAIL D C++Y + FPC CA IIQ+GI V
Sbjct: 61 K-YLKTLHAEENAILFAKR-DLDGCEIYVTHFPCPNCAAKIIQTGIAAV 107
>gi|48477494|ref|YP_023200.1| deaminase [Picrophilus torridus DSM 9790]
gi|48430142|gb|AAT43007.1| deaminase [Picrophilus torridus DSM 9790]
Length = 172
Score = 80.9 bits (198), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 48/119 (40%), Positives = 64/119 (53%), Gaps = 12/119 (10%)
Query: 91 WHEYFMASAFLVAKRSKDPVTRVGAVIVNEDNKIVGTGYNGMP--------IGCSDDEFP 142
W EYFM A+L A RS +VGAVIV +DN+++ TGYNG P +GC DE
Sbjct: 10 WDEYFMRMAYLAASRSNCTRRKVGAVIV-KDNQVLATGYNGPPTHAVNCDLVGCIRDELG 68
Query: 143 WDKNTHDEL-DMCHAEMNAILNK--NSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIY 198
EL HAE NAI+ N K K+Y + PC C+K+++ + I E+IY
Sbjct: 69 IQSGERHELCRGLHAEQNAIIQAAVNGVSIKGAKIYVTTHPCVVCSKMLMNAYIDEIIY 127
>gi|153214325|ref|ZP_01949326.1| deoxycytidylate deaminase, putative [Vibrio cholerae 1587]
gi|124115382|gb|EAY34202.1| deoxycytidylate deaminase, putative [Vibrio cholerae 1587]
Length = 161
Score = 80.9 bits (198), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 48/109 (44%), Positives = 61/109 (55%), Gaps = 3/109 (2%)
Query: 88 VLEWHEYFMASAFLVAKRSKDPVTRVGAVIVNEDNKIVGTGYNGMPIGCSDDEFPWDKNT 147
+ +W + F A LV SKDP T+VGAVI + N+IV G+NG P G SD D++
Sbjct: 2 ISKWAQRFFQMAELVGSWSKDPSTQVGAVITKQ-NRIVSVGFNGYPHGISDSASTDDRDM 60
Query: 148 HDELDMCHAEMNAILNKNSADTKRCKLYTSLFPCNECAKVIIQSGIKEV 196
L HAE NAIL D C++Y + FPC CA IIQ+GI V
Sbjct: 61 -KYLKTLHAEENAILFAKR-DLDGCEIYVTHFPCPNCAAKIIQTGISAV 107
>gi|357237477|ref|ZP_09124818.1| putative ComE operon protein 2 [Streptococcus ictaluri 707-05]
gi|356753667|gb|EHI70770.1| putative ComE operon protein 2 [Streptococcus ictaluri 707-05]
Length = 151
Score = 80.9 bits (198), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 48/119 (40%), Positives = 69/119 (57%), Gaps = 10/119 (8%)
Query: 89 LEWHEYFMASAFLVAKRSKDPVTRVGAVIVNEDNKIVGTGYNGMPIGCSDDEFPWDKNTH 148
L W +YFMA+A L++KRS VGAV+V +DN+I+ TGYNG G S + + +
Sbjct: 5 LSWQDYFMANAELISKRSTCDRAYVGAVLV-KDNRIIATGYNG---GVSATDNCNEAGHY 60
Query: 149 DELDMC----HAEMNAILN--KNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIYMCD 201
E C HAEMNA++ K T +LY + FPC C K ++Q+GI+++ Y D
Sbjct: 61 MEDGHCIRTVHAEMNALIQCAKEGISTDGTELYVTHFPCINCTKALLQAGIRKITYKAD 119
Score = 39.3 bits (90), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 17/46 (36%), Positives = 27/46 (58%), Gaps = 2/46 (4%)
Query: 1 MNAILN--KNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIYMCD 44
MNA++ K T +LY + FPC C K ++Q+GI+++ Y D
Sbjct: 74 MNALIQCAKEGISTDGTELYVTHFPCINCTKALLQAGIRKITYKAD 119
>gi|260774273|ref|ZP_05883188.1| putative deoxycytidylate deaminase [Vibrio metschnikovii CIP 69.14]
gi|260611234|gb|EEX36438.1| putative deoxycytidylate deaminase [Vibrio metschnikovii CIP 69.14]
Length = 157
Score = 80.5 bits (197), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 50/113 (44%), Positives = 61/113 (53%), Gaps = 11/113 (9%)
Query: 88 VLEWHEYFMASAFLVAKRSKDPVTRVGAVIVNEDNKIVGTGYNGMPIGCSDDEFPWDKNT 147
+ +W + F A LV SKDP T+VGAVI + N+IV G+NG P G SD NT
Sbjct: 2 ISKWAQRFYQMAELVGSWSKDPSTQVGAVITKQ-NRIVSVGFNGYPHGISDS-----ANT 55
Query: 148 HDE----LDMCHAEMNAILNKNSADTKRCKLYTSLFPCNECAKVIIQSGIKEV 196
D L HAE NAIL D C++Y + FPC CA IIQ+GI V
Sbjct: 56 DDRDMKYLKTLHAEENAILFAKR-DLDGCEIYVTHFPCPNCAAKIIQTGISAV 107
>gi|357639780|ref|ZP_09137653.1| putative ComE operon protein 2 [Streptococcus urinalis 2285-97]
gi|418418024|ref|ZP_12991215.1| ComE operon protein 2 [Streptococcus urinalis FB127-CNA-2]
gi|357588234|gb|EHJ57642.1| putative ComE operon protein 2 [Streptococcus urinalis 2285-97]
gi|410869123|gb|EKS17086.1| ComE operon protein 2 [Streptococcus urinalis FB127-CNA-2]
Length = 150
Score = 80.5 bits (197), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 47/116 (40%), Positives = 69/116 (59%), Gaps = 10/116 (8%)
Query: 89 LEWHEYFMASAFLVAKRSKDPVTRVGAVIVNEDNKIVGTGYNGMPIGCSDDEFPWDKNTH 148
L W +YFMA+A L++KRS VGAV+V ++N+I+ TGYNG G SD + + +
Sbjct: 5 LSWQDYFMANAELISKRSTCDRAFVGAVLV-KNNRIIATGYNG---GVSDTDNCNEAGHY 60
Query: 149 DELDMC----HAEMNAILN--KNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIY 198
E C HAEMNA++ K T ++Y + FPC C K ++Q+GIK++ Y
Sbjct: 61 MEEGHCIRTVHAEMNALIQCAKEGISTDGTEIYVTHFPCLNCTKALLQAGIKKITY 116
Score = 38.1 bits (87), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 20/60 (33%), Positives = 33/60 (55%), Gaps = 5/60 (8%)
Query: 1 MNAILN--KNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIYMCDKHKQKPATIASKRM 58
MNA++ K T ++Y + FPC C K ++Q+GIK++ Y K +P +A + M
Sbjct: 74 MNALIQCAKEGISTDGTEIYVTHFPCLNCTKALLQAGIKKITY---KANYRPHPLAIELM 130
>gi|258623229|ref|ZP_05718238.1| deoxycytidylate deaminase, putative [Vibrio mimicus VM573]
gi|258627669|ref|ZP_05722443.1| deoxycytidylate deaminase, putative [Vibrio mimicus VM603]
gi|262173485|ref|ZP_06041162.1| deoxycytidylate deaminase [Vibrio mimicus MB-451]
gi|262403414|ref|ZP_06079972.1| deoxycytidylate deaminase [Vibrio sp. RC586]
gi|424810572|ref|ZP_18235921.1| deoxycytidylate deaminase [Vibrio mimicus SX-4]
gi|258580040|gb|EEW05015.1| deoxycytidylate deaminase, putative [Vibrio mimicus VM603]
gi|258584527|gb|EEW09267.1| deoxycytidylate deaminase, putative [Vibrio mimicus VM573]
gi|261890843|gb|EEY36830.1| deoxycytidylate deaminase [Vibrio mimicus MB-451]
gi|262349918|gb|EEY99053.1| deoxycytidylate deaminase [Vibrio sp. RC586]
gi|342322330|gb|EGU18122.1| deoxycytidylate deaminase [Vibrio mimicus SX-4]
Length = 160
Score = 80.5 bits (197), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 48/109 (44%), Positives = 61/109 (55%), Gaps = 3/109 (2%)
Query: 88 VLEWHEYFMASAFLVAKRSKDPVTRVGAVIVNEDNKIVGTGYNGMPIGCSDDEFPWDKNT 147
+ +W + F A LV SKDP T+VGAVI + N+IV G+NG P G SD D++
Sbjct: 2 ISKWAQRFFQMAELVGSWSKDPSTQVGAVITKQ-NRIVSVGFNGYPHGISDSASTDDRDM 60
Query: 148 HDELDMCHAEMNAILNKNSADTKRCKLYTSLFPCNECAKVIIQSGIKEV 196
L HAE NAIL D C++Y + FPC CA IIQ+GI V
Sbjct: 61 K-YLKTLHAEENAILFAKR-DLDGCEIYVTHFPCPNCAAKIIQTGIAAV 107
>gi|260770055|ref|ZP_05878988.1| putative deoxycytidylate deaminase [Vibrio furnissii CIP 102972]
gi|375133403|ref|YP_005049811.1| deoxycytidylate deaminase, hypothetical [Vibrio furnissii NCTC
11218]
gi|260615393|gb|EEX40579.1| putative deoxycytidylate deaminase [Vibrio furnissii CIP 102972]
gi|315182578|gb|ADT89491.1| deoxycytidylate deaminase, hypothetical [Vibrio furnissii NCTC
11218]
Length = 154
Score = 80.5 bits (197), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 50/113 (44%), Positives = 61/113 (53%), Gaps = 11/113 (9%)
Query: 88 VLEWHEYFMASAFLVAKRSKDPVTRVGAVIVNEDNKIVGTGYNGMPIGCSDDEFPWDKNT 147
+ +W + F A LV SKDP T+VGAVI + N+IV G+NG P G SD NT
Sbjct: 2 ISKWAQRFYQMAELVGSWSKDPSTQVGAVITKQ-NRIVSVGFNGYPHGISDS-----ANT 55
Query: 148 HDE----LDMCHAEMNAILNKNSADTKRCKLYTSLFPCNECAKVIIQSGIKEV 196
D L HAE NAIL D C++Y + FPC CA IIQ+GI V
Sbjct: 56 DDRDMKYLKTLHAEENAILFAKR-DLDGCEIYVTHFPCPNCAAKIIQTGISAV 107
>gi|156976611|ref|YP_001447517.1| deoxycytidylate deaminase [Vibrio harveyi ATCC BAA-1116]
gi|156528205|gb|ABU73290.1| hypothetical protein VIBHAR_05385 [Vibrio harveyi ATCC BAA-1116]
Length = 168
Score = 80.5 bits (197), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 49/114 (42%), Positives = 65/114 (57%), Gaps = 3/114 (2%)
Query: 83 KRVDDVLEWHEYFMASAFLVAKRSKDPVTRVGAVIVNEDNKIVGTGYNGMPIGCSDDEFP 142
+R+ + +W + F A LVA SKDP T+VGAVI ++N+IV G+NG P G S D
Sbjct: 13 ERMSMISKWEKRFYQMAELVASWSKDPSTQVGAVIT-KNNRIVSVGFNGYPHGVS-DSVD 70
Query: 143 WDKNTHDELDMCHAEMNAILNKNSADTKRCKLYTSLFPCNECAKVIIQSGIKEV 196
D+ L HAE NAIL + D C ++ + FPC CA IIQ+GI V
Sbjct: 71 TDERELKYLKTLHAEENAILF-SKRDLDGCDIWVTHFPCPNCAAKIIQTGIARV 123
>gi|163800337|ref|ZP_02194238.1| deoxycytidylate deaminase [Vibrio sp. AND4]
gi|159175780|gb|EDP60574.1| deoxycytidylate deaminase [Vibrio sp. AND4]
Length = 152
Score = 80.5 bits (197), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 48/109 (44%), Positives = 62/109 (56%), Gaps = 3/109 (2%)
Query: 88 VLEWHEYFMASAFLVAKRSKDPVTRVGAVIVNEDNKIVGTGYNGMPIGCSDDEFPWDKNT 147
+ +W + F A LVA SKDP T+VGAVI + N+IV G+NG P G SD D+
Sbjct: 2 ISKWEKRFYQMAELVASWSKDPSTQVGAVITKQ-NRIVSVGFNGYPHGVSDS-VDTDERE 59
Query: 148 HDELDMCHAEMNAILNKNSADTKRCKLYTSLFPCNECAKVIIQSGIKEV 196
L HAE NAIL + D C+++ + FPC CA IIQ+GI V
Sbjct: 60 LKYLKTLHAEENAILF-SKRDLDGCEIWVTHFPCPNCAAKIIQTGISRV 107
>gi|153956292|ref|YP_001397057.1| deaminase [Clostridium kluyveri DSM 555]
gi|219856609|ref|YP_002473731.1| hypothetical protein CKR_3266 [Clostridium kluyveri NBRC 12016]
gi|146349150|gb|EDK35686.1| Predicted deaminase [Clostridium kluyveri DSM 555]
gi|219570333|dbj|BAH08317.1| hypothetical protein [Clostridium kluyveri NBRC 12016]
Length = 141
Score = 80.5 bits (197), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 47/111 (42%), Positives = 65/111 (58%), Gaps = 4/111 (3%)
Query: 90 EWHEYFMASAFLVAKRSKDPVTRVGAVIVNEDNKIVGTGYNGMPIGCS--DDEFPWDKNT 147
+W YF+ AF VA+RS P VGAV+V ++ +I GTGYNG P G D+ + K+
Sbjct: 7 DWDNYFIDIAFQVAERSTCPRLHVGAVLV-KNRRIKGTGYNGSPRGLEHCDEAGCYMKDN 65
Query: 148 HDELDMCHAEMNAILNKNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIY 198
H + HAE+N +L + D + LY + PC EC K+II G+K VIY
Sbjct: 66 HC-IRTIHAEVNCLLEVSPDDRENSTLYVTHMPCPECQKLIINCGVKRVIY 115
Score = 38.5 bits (88), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 17/41 (41%), Positives = 24/41 (58%)
Query: 1 MNAILNKNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIY 41
+N +L + D + LY + PC EC K+II G+K VIY
Sbjct: 75 VNCLLEVSPDDRENSTLYVTHMPCPECQKLIINCGVKRVIY 115
>gi|325912230|ref|ZP_08174627.1| putative ComE operon protein 2 [Lactobacillus iners UPII 143-D]
gi|325912505|ref|ZP_08174895.1| putative ComE operon protein 2 [Lactobacillus iners UPII 60-B]
gi|325475889|gb|EGC79058.1| putative ComE operon protein 2 [Lactobacillus iners UPII 143-D]
gi|325478178|gb|EGC81300.1| putative ComE operon protein 2 [Lactobacillus iners UPII 60-B]
Length = 157
Score = 80.5 bits (197), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 46/124 (37%), Positives = 68/124 (54%), Gaps = 12/124 (9%)
Query: 85 VDDVLEWHEYFMASAFLVAKRSKDPVTRVGAVIVNEDNKIVGTGYNGMPIGCSDDEFPWD 144
V D + W +YFM A ++++RS VG+V+V +D +++ TGYNG G E D
Sbjct: 2 VRDRISWQQYFMMQALVISQRSTCDRALVGSVLV-KDKRMIATGYNGSVTG----EPHCD 56
Query: 145 KNTHDELD-----MCHAEMNAILN--KNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVI 197
H +D H+EMNA++ KN T+ C +Y + FPC C K ++Q+GI EV
Sbjct: 57 DEGHLMIDGHCVRTIHSEMNALIQCAKNGISTEGCAIYVTHFPCYNCTKALVQAGIVEVN 116
Query: 198 YMCD 201
Y D
Sbjct: 117 YYYD 120
Score = 43.1 bits (100), Expect = 0.061, Method: Compositional matrix adjust.
Identities = 21/56 (37%), Positives = 33/56 (58%), Gaps = 3/56 (5%)
Query: 1 MNAILN--KNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIYMCDKHKQKPATIA 54
MNA++ KN T+ C +Y + FPC C K ++Q+GI EV Y D ++ P ++
Sbjct: 75 MNALIQCAKNGISTEGCAIYVTHFPCYNCTKALVQAGIVEVNYYYD-YRDNPLVMS 129
>gi|418322692|ref|ZP_12934006.1| ComE operon protein 2 [Staphylococcus pettenkoferi VCU012]
gi|365231139|gb|EHM72198.1| ComE operon protein 2 [Staphylococcus pettenkoferi VCU012]
Length = 152
Score = 80.5 bits (197), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 50/117 (42%), Positives = 66/117 (56%), Gaps = 6/117 (5%)
Query: 89 LEWHEYFMASAFLVAKRSKDPVTRVGAVIVNEDNKIVGTGYNGMPIGCSD--DEFPWDKN 146
L+W EYFMA + L+A RS VGA IV +DN+I+ GYNG G DE ++
Sbjct: 4 LQWEEYFMAQSHLLALRSTCTRLSVGATIV-KDNRIIAGGYNGSVAGEVHCIDEGCLIED 62
Query: 147 THDELDMCHAEMNAILN--KNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIYMCD 201
H + HAEMNA+L K T+ +Y + FPC C K IIQ+GIK++ Y D
Sbjct: 63 GHC-IRTIHAEMNALLQCAKQGVSTEGATIYVTHFPCLNCTKSIIQAGIKKIYYAED 118
Score = 43.1 bits (100), Expect = 0.077, Method: Compositional matrix adjust.
Identities = 22/53 (41%), Positives = 29/53 (54%), Gaps = 2/53 (3%)
Query: 1 MNAILN--KNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIYMCDKHKQKPA 51
MNA+L K T+ +Y + FPC C K IIQ+GIK++ Y D H A
Sbjct: 73 MNALLQCAKQGVSTEGATIYVTHFPCLNCTKSIIQAGIKKIYYAEDYHNHDYA 125
>gi|448930066|gb|AGE53632.1| dCMP deaminase [Acanthocystis turfacea Chlorella virus GM0701.1]
Length = 149
Score = 80.5 bits (197), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 39/107 (36%), Positives = 69/107 (64%), Gaps = 3/107 (2%)
Query: 93 EYFMASAFLVAKRSKDPVTRVGAVIVNEDNKIVGTGYNGMPIGCSDDEFPWDKNTHDELD 152
+++ S + SKDP T+V A+++++++ I+ GYNG+P G + + W K T +
Sbjct: 6 KFYSLSCYHAELFSKDPNTKVAAMVIDKNHNILSVGYNGLPRGFEETKERWSKPTKYQY- 64
Query: 153 MCHAEMNAILN--KNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVI 197
+ HAE NAI +N A + + ++LFPC++CA++IIQSGI++V+
Sbjct: 65 VVHAEANAICTAARNGAKLEGGSIVSTLFPCDQCARLIIQSGIRKVV 111
Score = 41.6 bits (96), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 21/60 (35%), Positives = 36/60 (60%), Gaps = 2/60 (3%)
Query: 7 KNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIYMCDKHKQK--PATIASKRMFDAAKV 64
+N A + + ++LFPC++CA++IIQSGI++V+ + + + SK MFD V
Sbjct: 78 RNGAKLEGGSIVSTLFPCDQCARLIIQSGIRKVVTVRPEENSSWLQSFGYSKEMFDECGV 137
>gi|340369819|ref|XP_003383445.1| PREDICTED: hypothetical protein LOC100639180 [Amphimedon
queenslandica]
Length = 442
Score = 80.5 bits (197), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 54/152 (35%), Positives = 78/152 (51%), Gaps = 21/152 (13%)
Query: 68 SEMDKMNGVQNGSPHKRVDDVLEWHEYFMASAFLVAKRSKDPVTRVGAVIVNEDN-KIVG 126
+E D + +Q ++ +W EY+M A L A RSKDP T VGA IV+ + +IVG
Sbjct: 141 TEKDTIERIQAEVREFKIKRSKQWDEYYMKIACLAALRSKDPSTPVGACIVDTKSYQIVG 200
Query: 127 TGYNGMPI--GCSDDE--FPW---DKNTHDELD-------------MCHAEMNAILNKNS 166
GYN MP G S+++ F W +N +L + HA +NAI N+
Sbjct: 201 IGYNSMPSVKGRSNNDKIFSWKGLSENASQKLKEKKDKDSKLKYPFVVHAAVNAITNRTK 260
Query: 167 ADTKRCKLYTSLFPCNECAKVIIQSGIKEVIY 198
C +Y +L P +CA+ I +GIKEV+Y
Sbjct: 261 DKLDGCTIYVTLKPDEDCARAIQLAGIKEVVY 292
Score = 38.9 bits (89), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 17/41 (41%), Positives = 25/41 (60%)
Query: 1 MNAILNKNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIY 41
+NAI N+ C +Y +L P +CA+ I +GIKEV+Y
Sbjct: 252 VNAITNRTKDKLDGCTIYVTLKPDEDCARAIQLAGIKEVVY 292
>gi|343492285|ref|ZP_08730657.1| putative deoxycytidylate deaminase [Vibrio nigripulchritudo ATCC
27043]
gi|342827333|gb|EGU61722.1| putative deoxycytidylate deaminase [Vibrio nigripulchritudo ATCC
27043]
Length = 151
Score = 80.5 bits (197), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 48/109 (44%), Positives = 60/109 (55%), Gaps = 3/109 (2%)
Query: 88 VLEWHEYFMASAFLVAKRSKDPVTRVGAVIVNEDNKIVGTGYNGMPIGCSDDEFPWDKNT 147
+ +W + F A LV SKDP T+VGAVI N+IV G+NG P G SD D+
Sbjct: 2 ISKWAQRFFQMAELVGSWSKDPSTQVGAVITKH-NRIVSVGFNGYPHGISDSAET-DERD 59
Query: 148 HDELDMCHAEMNAILNKNSADTKRCKLYTSLFPCNECAKVIIQSGIKEV 196
L HAE NAIL D C+++ + FPC CA IIQ+GIK V
Sbjct: 60 MKYLKTLHAEENAILFAKR-DLDNCEIWVTHFPCPNCAAKIIQTGIKAV 107
>gi|309808484|ref|ZP_07702383.1| putative ComE operon protein 2 [Lactobacillus iners LactinV 01V1-a]
gi|308168312|gb|EFO70431.1| putative ComE operon protein 2 [Lactobacillus iners LactinV 01V1-a]
Length = 157
Score = 80.5 bits (197), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 47/122 (38%), Positives = 70/122 (57%), Gaps = 8/122 (6%)
Query: 85 VDDVLEWHEYFMASAFLVAKRSKDPVTRVGAVIVNEDNKIVGTGYNGMPIG---CSDDEF 141
V D + W +YFM A ++++RS VG+V+V +D +++ TGYNG G C DDE
Sbjct: 2 VRDRISWQQYFMMQALVISQRSTCDRALVGSVLV-KDKRMIATGYNGSVTGEPHC-DDEG 59
Query: 142 PWDKNTHDELDMCHAEMNAILN--KNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIYM 199
+ H + H+EMNA++ KN T+ C +Y + FPC C K ++Q+GI EV Y
Sbjct: 60 HLMVDGHC-VRTIHSEMNALIQCAKNGISTEGCAIYVTHFPCYNCTKALVQAGIVEVNYY 118
Query: 200 CD 201
D
Sbjct: 119 YD 120
Score = 43.1 bits (100), Expect = 0.061, Method: Compositional matrix adjust.
Identities = 21/56 (37%), Positives = 33/56 (58%), Gaps = 3/56 (5%)
Query: 1 MNAILN--KNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIYMCDKHKQKPATIA 54
MNA++ KN T+ C +Y + FPC C K ++Q+GI EV Y D ++ P ++
Sbjct: 75 MNALIQCAKNGISTEGCAIYVTHFPCYNCTKALVQAGIVEVNYYYD-YRDNPLVMS 129
>gi|336126092|ref|YP_004578048.1| deoxycytidylate deaminase [Vibrio anguillarum 775]
gi|365539776|ref|ZP_09364951.1| deoxycytidylate deaminase [Vibrio ordalii ATCC 33509]
gi|335343809|gb|AEH35091.1| Deoxycytidylate deaminase [Vibrio anguillarum 775]
Length = 147
Score = 80.5 bits (197), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 48/109 (44%), Positives = 61/109 (55%), Gaps = 3/109 (2%)
Query: 88 VLEWHEYFMASAFLVAKRSKDPVTRVGAVIVNEDNKIVGTGYNGMPIGCSDDEFPWDKNT 147
+ +W + F A LV SKDP T+VGAVI + N+IV G+NG P G SD D++
Sbjct: 2 ISKWAQRFYQMAELVGSWSKDPSTQVGAVITKQ-NRIVSVGFNGYPHGISDSAGTDDRDM 60
Query: 148 HDELDMCHAEMNAILNKNSADTKRCKLYTSLFPCNECAKVIIQSGIKEV 196
L HAE NAIL D C++Y + FPC CA IIQ+GI V
Sbjct: 61 K-YLKTLHAEENAILFAKR-DLDGCEIYVTHFPCPNCAAKIIQTGISAV 107
>gi|350533609|ref|ZP_08912550.1| deoxycytidylate deaminase [Vibrio rotiferianus DAT722]
Length = 152
Score = 80.1 bits (196), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 48/109 (44%), Positives = 62/109 (56%), Gaps = 3/109 (2%)
Query: 88 VLEWHEYFMASAFLVAKRSKDPVTRVGAVIVNEDNKIVGTGYNGMPIGCSDDEFPWDKNT 147
+ +W + F A LVA SKDP T+VGAVI + N+IV G+NG P G SD D+
Sbjct: 2 ISKWEKRFYQMAELVASWSKDPSTQVGAVITKQ-NRIVSVGFNGYPHGVSDS-VDTDERE 59
Query: 148 HDELDMCHAEMNAILNKNSADTKRCKLYTSLFPCNECAKVIIQSGIKEV 196
L HAE NAIL + D C+++ + FPC CA IIQ+GI V
Sbjct: 60 LKYLKTLHAEENAILF-SKRDLDGCEIWVTHFPCPNCAAKIIQTGISRV 107
>gi|54302697|ref|YP_132690.1| deoxycytidylate deaminase [Photobacterium profundum SS9]
gi|90414645|ref|ZP_01222617.1| putative deoxycytidylate deaminase [Photobacterium profundum 3TCK]
gi|46916121|emb|CAG22890.1| putative deoxycytidylate deaminase [Photobacterium profundum SS9]
gi|90324278|gb|EAS40850.1| putative deoxycytidylate deaminase [Photobacterium profundum 3TCK]
Length = 149
Score = 80.1 bits (196), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 50/113 (44%), Positives = 61/113 (53%), Gaps = 11/113 (9%)
Query: 88 VLEWHEYFMASAFLVAKRSKDPVTRVGAVIVNEDNKIVGTGYNGMPIGCSDDEFPWDKNT 147
+ +W + F A LV SKDP T+VGAVI E N+IV G+NG P G SD NT
Sbjct: 2 ISKWAQRFFQMAELVGSWSKDPSTQVGAVI-TEHNRIVSVGFNGYPHGISDS-----ANT 55
Query: 148 HDE----LDMCHAEMNAILNKNSADTKRCKLYTSLFPCNECAKVIIQSGIKEV 196
D L HAE NAIL D C+++ + FPC CA IIQ+GI V
Sbjct: 56 DDRDMKLLKTLHAEENAILFAKR-DLSGCEIWVTHFPCPNCAAKIIQTGISMV 107
>gi|300853441|ref|YP_003778425.1| cytidine deaminase [Clostridium ljungdahlii DSM 13528]
gi|300433556|gb|ADK13323.1| cytidine deaminase [Clostridium ljungdahlii DSM 13528]
Length = 136
Score = 80.1 bits (196), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 48/111 (43%), Positives = 64/111 (57%), Gaps = 4/111 (3%)
Query: 90 EWHEYFMASAFLVAKRSKDPVTRVGAVIVNEDNKIVGTGYNGMPIGCS--DDEFPWDKNT 147
+W YF+ AF VA+RS P VGAV+V ++ +I GTGYNG P G +D + KN
Sbjct: 4 DWDNYFIDIAFKVAERSTCPRLHVGAVLV-KNRRIKGTGYNGSPRGLEHCEDVGCYMKNN 62
Query: 148 HDELDMCHAEMNAILNKNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIY 198
H + HAE+N +L D + LY + PC EC K+II GIK V+Y
Sbjct: 63 HC-VRTIHAEVNCLLEVAPDDRESSTLYVTHMPCPECQKLIITCGIKRVVY 112
Score = 37.4 bits (85), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 17/41 (41%), Positives = 23/41 (56%)
Query: 1 MNAILNKNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIY 41
+N +L D + LY + PC EC K+II GIK V+Y
Sbjct: 72 VNCLLEVAPDDRESSTLYVTHMPCPECQKLIITCGIKRVVY 112
>gi|259500880|ref|ZP_05743782.1| competence protein ComEB [Lactobacillus iners DSM 13335]
gi|302190667|ref|ZP_07266921.1| ComE operon protein 2 [Lactobacillus iners AB-1]
gi|309803656|ref|ZP_07697746.1| putative ComE operon protein 2 [Lactobacillus iners LactinV 11V1-d]
gi|309805762|ref|ZP_07699799.1| putative ComE operon protein 2 [Lactobacillus iners LactinV 09V1-c]
gi|309805965|ref|ZP_07699992.1| putative ComE operon protein 2 [Lactobacillus iners LactinV 03V1-b]
gi|309809164|ref|ZP_07703037.1| putative ComE operon protein 2 [Lactobacillus iners SPIN 2503V10-D]
gi|312871238|ref|ZP_07731336.1| putative ComE operon protein 2 [Lactobacillus iners LEAF 3008A-a]
gi|312872692|ref|ZP_07732757.1| putative ComE operon protein 2 [Lactobacillus iners LEAF 2062A-h1]
gi|312874090|ref|ZP_07734125.1| putative ComE operon protein 2 [Lactobacillus iners LEAF 2052A-d]
gi|312874953|ref|ZP_07734972.1| putative ComE operon protein 2 [Lactobacillus iners LEAF 2053A-b]
gi|315654038|ref|ZP_07906954.1| competence protein comEB [Lactobacillus iners ATCC 55195]
gi|329920925|ref|ZP_08277474.1| putative ComE operon protein 2 [Lactobacillus iners SPIN 1401G]
gi|349611941|ref|ZP_08891170.1| hypothetical protein HMPREF1027_00597 [Lactobacillus sp. 7_1_47FAA]
gi|259167574|gb|EEW52069.1| competence protein ComEB [Lactobacillus iners DSM 13335]
gi|308164254|gb|EFO66511.1| putative ComE operon protein 2 [Lactobacillus iners LactinV 11V1-d]
gi|308164882|gb|EFO67128.1| putative ComE operon protein 2 [Lactobacillus iners LactinV 09V1-c]
gi|308167647|gb|EFO69799.1| putative ComE operon protein 2 [Lactobacillus iners LactinV 03V1-b]
gi|308170609|gb|EFO72629.1| putative ComE operon protein 2 [Lactobacillus iners SPIN 2503V10-D]
gi|311089698|gb|EFQ48123.1| putative ComE operon protein 2 [Lactobacillus iners LEAF 2053A-b]
gi|311090430|gb|EFQ48839.1| putative ComE operon protein 2 [Lactobacillus iners LEAF 2052A-d]
gi|311091734|gb|EFQ50113.1| putative ComE operon protein 2 [Lactobacillus iners LEAF 2062A-h1]
gi|311093252|gb|EFQ51598.1| putative ComE operon protein 2 [Lactobacillus iners LEAF 3008A-a]
gi|315488734|gb|EFU78380.1| competence protein comEB [Lactobacillus iners ATCC 55195]
gi|328935490|gb|EGG31961.1| putative ComE operon protein 2 [Lactobacillus iners SPIN 1401G]
gi|348608087|gb|EGY58073.1| hypothetical protein HMPREF1027_00597 [Lactobacillus sp. 7_1_47FAA]
Length = 157
Score = 80.1 bits (196), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 47/122 (38%), Positives = 70/122 (57%), Gaps = 8/122 (6%)
Query: 85 VDDVLEWHEYFMASAFLVAKRSKDPVTRVGAVIVNEDNKIVGTGYNGMPIG---CSDDEF 141
V D + W +YFM A ++++RS VG+V+V +D +++ TGYNG G C DDE
Sbjct: 2 VRDRISWQQYFMMQALVISQRSTCDRALVGSVLV-KDKRMIATGYNGSVTGEPHC-DDEG 59
Query: 142 PWDKNTHDELDMCHAEMNAILN--KNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIYM 199
+ H + H+EMNA++ KN T+ C +Y + FPC C K ++Q+GI EV Y
Sbjct: 60 HLMVDGHC-VRTIHSEMNALIQCAKNGISTEGCAIYVTHFPCFNCTKALVQAGIVEVNYY 118
Query: 200 CD 201
D
Sbjct: 119 YD 120
Score = 44.3 bits (103), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 22/56 (39%), Positives = 33/56 (58%), Gaps = 3/56 (5%)
Query: 1 MNAILN--KNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIYMCDKHKQKPATIA 54
MNA++ KN T+ C +Y + FPC C K ++Q+GI EV Y D ++ P +A
Sbjct: 75 MNALIQCAKNGISTEGCAIYVTHFPCFNCTKALVQAGIVEVNYYYD-YRDNPLVMA 129
>gi|448936308|gb|AGE59856.1| dCMP deaminase [Acanthocystis turfacea Chlorella virus TN603.4.2]
Length = 149
Score = 80.1 bits (196), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 39/107 (36%), Positives = 69/107 (64%), Gaps = 3/107 (2%)
Query: 93 EYFMASAFLVAKRSKDPVTRVGAVIVNEDNKIVGTGYNGMPIGCSDDEFPWDKNTHDELD 152
+++ S + SKDP T+V A+++++++ I+ GYNG+P G + + W K T +
Sbjct: 6 KFYSLSCYHAELFSKDPNTKVAAMVIDKNHNILSVGYNGLPRGFEETKERWSKPTKYQY- 64
Query: 153 MCHAEMNAILN--KNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVI 197
+ HAE NAI +N A + + ++LFPC++CA++IIQ+GIK+V+
Sbjct: 65 VVHAEANAICTAARNGAKLEGGSIVSTLFPCDQCARLIIQAGIKKVV 111
Score = 40.8 bits (94), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 15/34 (44%), Positives = 27/34 (79%)
Query: 7 KNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVI 40
+N A + + ++LFPC++CA++IIQ+GIK+V+
Sbjct: 78 RNGAKLEGGSIVSTLFPCDQCARLIIQAGIKKVV 111
>gi|323499282|ref|ZP_08104259.1| putative deoxycytidylate deaminase [Vibrio sinaloensis DSM 21326]
gi|323315670|gb|EGA68704.1| putative deoxycytidylate deaminase [Vibrio sinaloensis DSM 21326]
Length = 150
Score = 80.1 bits (196), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 47/109 (43%), Positives = 59/109 (54%), Gaps = 3/109 (2%)
Query: 88 VLEWHEYFMASAFLVAKRSKDPVTRVGAVIVNEDNKIVGTGYNGMPIGCSDDEFPWDKNT 147
+ +W + F A LV SKDP T+VGAVI + N+IV G+NG P G SD D
Sbjct: 2 ITKWAQRFYQMAELVGSWSKDPSTQVGAVITKQ-NRIVSVGFNGYPHGISDSAMT-DDRE 59
Query: 148 HDELDMCHAEMNAILNKNSADTKRCKLYTSLFPCNECAKVIIQSGIKEV 196
L HAE NAIL D C+++ + FPC CA IIQ+GI V
Sbjct: 60 MKYLKTLHAEENAILFAKR-DLDGCEIWVTHFPCPNCAAKIIQTGISAV 107
>gi|313889696|ref|ZP_07823339.1| putative ComE operon protein 2 [Streptococcus pseudoporcinus SPIN
20026]
gi|416851962|ref|ZP_11909107.1| putative ComE operon protein 2 [Streptococcus pseudoporcinus LQ
940-04]
gi|313121993|gb|EFR45089.1| putative ComE operon protein 2 [Streptococcus pseudoporcinus SPIN
20026]
gi|356739451|gb|EHI64683.1| putative ComE operon protein 2 [Streptococcus pseudoporcinus LQ
940-04]
Length = 152
Score = 80.1 bits (196), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 48/116 (41%), Positives = 68/116 (58%), Gaps = 10/116 (8%)
Query: 89 LEWHEYFMASAFLVAKRSKDPVTRVGAVIVNEDNKIVGTGYNGMPIGCSDDEFPWDKNTH 148
L W +YFMA+A L++KRS VGAV+V +DN+I+ TGYNG G S + + +
Sbjct: 5 LSWQDYFMANAELISKRSTCDRAFVGAVLV-KDNRIIATGYNG---GVSATDNCNEAGHY 60
Query: 149 DELDMC----HAEMNAILN--KNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIY 198
E C HAEMNA++ K T +LY + FPC C K ++Q+GIK++ Y
Sbjct: 61 MEDGHCIRTVHAEMNALIQCAKEGISTDGTELYVTHFPCINCTKALLQAGIKKITY 116
Score = 38.9 bits (89), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 21/60 (35%), Positives = 32/60 (53%), Gaps = 5/60 (8%)
Query: 1 MNAILN--KNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIYMCDKHKQKPATIASKRM 58
MNA++ K T +LY + FPC C K ++Q+GIK++ Y K +P A + M
Sbjct: 74 MNALIQCAKEGISTDGTELYVTHFPCINCTKALLQAGIKKITY---KAHYRPHPFAIELM 130
>gi|322373694|ref|ZP_08048230.1| cytidine/deoxycytidylate deaminase family protein [Streptococcus
sp. C150]
gi|321278736|gb|EFX55805.1| cytidine/deoxycytidylate deaminase family protein [Streptococcus
sp. C150]
Length = 151
Score = 80.1 bits (196), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 47/116 (40%), Positives = 69/116 (59%), Gaps = 10/116 (8%)
Query: 89 LEWHEYFMASAFLVAKRSKDPVTRVGAVIVNEDNKIVGTGYNGMPIGCSDDEFPWDKNTH 148
L W +YFMA+A L++KRS VGAV+V +DN+I+ TGYNG G S+ + + +
Sbjct: 5 LSWQDYFMANAELISKRSTCDRAYVGAVLV-KDNRIIATGYNG---GVSETDNCNEVGHY 60
Query: 149 DELDMC----HAEMNAILN--KNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIY 198
E C HAEMNA++ K TK ++Y + FPC C K ++Q+GI ++ Y
Sbjct: 61 MEDGHCIRTVHAEMNALIQCAKEGISTKNTEIYVTHFPCINCTKALLQAGIVKITY 116
Score = 38.1 bits (87), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 20/60 (33%), Positives = 32/60 (53%), Gaps = 5/60 (8%)
Query: 1 MNAILN--KNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIYMCDKHKQKPATIASKRM 58
MNA++ K TK ++Y + FPC C K ++Q+GI ++ Y K +P A + M
Sbjct: 74 MNALIQCAKEGISTKNTEIYVTHFPCINCTKALLQAGIVKITY---KANYRPHGFAMELM 130
>gi|448934210|gb|AGE57764.1| dCMP deaminase [Acanthocystis turfacea Chlorella virus NTS-1]
Length = 156
Score = 80.1 bits (196), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 38/107 (35%), Positives = 68/107 (63%), Gaps = 3/107 (2%)
Query: 93 EYFMASAFLVAKRSKDPVTRVGAVIVNEDNKIVGTGYNGMPIGCSDDEFPWDKNTHDELD 152
+++ S + SKDP T+V A+++++++ I+ GYNG+P G + + W K T +
Sbjct: 6 KFYALSCYHAELFSKDPNTKVAAMVIDDNHNILSVGYNGLPRGFEETQERWSKPTKYQY- 64
Query: 153 MCHAEMNAILN--KNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVI 197
+ HAE NAI +N A + ++LFPC++CA++IIQSG+++V+
Sbjct: 65 VVHAEANAICTAARNGAKLDGGSIVSTLFPCDQCARLIIQSGLRKVV 111
Score = 40.0 bits (92), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 14/34 (41%), Positives = 26/34 (76%)
Query: 7 KNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVI 40
+N A + ++LFPC++CA++IIQSG+++V+
Sbjct: 78 RNGAKLDGGSIVSTLFPCDQCARLIIQSGLRKVV 111
>gi|419707624|ref|ZP_14235106.1| Late competence protein required for DNA binding and uptake
[Streptococcus salivarius PS4]
gi|383282624|gb|EIC80606.1| Late competence protein required for DNA binding and uptake
[Streptococcus salivarius PS4]
Length = 156
Score = 80.1 bits (196), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 47/116 (40%), Positives = 69/116 (59%), Gaps = 10/116 (8%)
Query: 89 LEWHEYFMASAFLVAKRSKDPVTRVGAVIVNEDNKIVGTGYNGMPIGCSDDEFPWDKNTH 148
L W +YFMA+A L++KRS VGAV+V +DN+I+ TGYNG G S+ + + +
Sbjct: 10 LSWQDYFMANAELISKRSTCDRAYVGAVLV-KDNRIIATGYNG---GVSETDNCNEVGHY 65
Query: 149 DELDMC----HAEMNAILN--KNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIY 198
E C HAEMNA++ K TK ++Y + FPC C K ++Q+GI ++ Y
Sbjct: 66 MEDGHCIRTVHAEMNALIQCAKEGISTKNTEIYVTHFPCINCTKALLQAGIVKITY 121
Score = 38.1 bits (87), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 20/60 (33%), Positives = 32/60 (53%), Gaps = 5/60 (8%)
Query: 1 MNAILN--KNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIYMCDKHKQKPATIASKRM 58
MNA++ K TK ++Y + FPC C K ++Q+GI ++ Y K +P A + M
Sbjct: 79 MNALIQCAKEGISTKNTEIYVTHFPCINCTKALLQAGIVKITY---KANYRPHGFAMELM 135
>gi|332523517|ref|ZP_08399769.1| putative ComE operon protein 2 [Streptococcus porcinus str.
Jelinkova 176]
gi|332314781|gb|EGJ27766.1| putative ComE operon protein 2 [Streptococcus porcinus str.
Jelinkova 176]
Length = 152
Score = 80.1 bits (196), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 48/116 (41%), Positives = 68/116 (58%), Gaps = 10/116 (8%)
Query: 89 LEWHEYFMASAFLVAKRSKDPVTRVGAVIVNEDNKIVGTGYNGMPIGCSDDEFPWDKNTH 148
L W +YFMA+A L++KRS VGAV+V +DN+I+ TGYNG G S + + +
Sbjct: 5 LSWQDYFMANAELISKRSTCDRAFVGAVLV-KDNRIIATGYNG---GVSATDNCNEAGHY 60
Query: 149 DELDMC----HAEMNAILN--KNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIY 198
E C HAEMNA++ K T +LY + FPC C K ++Q+GIK++ Y
Sbjct: 61 MEDGHCIRTVHAEMNALIQCAKEGISTDGTELYVTHFPCINCTKALLQAGIKKITY 116
Score = 38.9 bits (89), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 21/60 (35%), Positives = 32/60 (53%), Gaps = 5/60 (8%)
Query: 1 MNAILN--KNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIYMCDKHKQKPATIASKRM 58
MNA++ K T +LY + FPC C K ++Q+GIK++ Y K +P A + M
Sbjct: 74 MNALIQCAKEGISTDGTELYVTHFPCINCTKALLQAGIKKITY---KAHYRPHPFAIELM 130
>gi|125572137|gb|EAZ13652.1| hypothetical protein OsJ_03569 [Oryza sativa Japonica Group]
Length = 157
Score = 80.1 bits (196), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 43/103 (41%), Positives = 57/103 (55%), Gaps = 7/103 (6%)
Query: 50 PATIASKRMFDAAKVHYWSEMDKMNGV-----QNGSPHKRVDDVLEWHEYFMASAFLVAK 104
P +A KRM A + G GSP + + W +YFMA AFL AK
Sbjct: 46 PEHLAVKRMRRRAPAGAVPLRSRQEGRVSPSRPTGSPS--LIRYISWDDYFMAIAFLSAK 103
Query: 105 RSKDPVTRVGAVIVNEDNKIVGTGYNGMPIGCSDDEFPWDKNT 147
RSKDP +VGA +V+++ I+G GYNG P GCSD++ PW K +
Sbjct: 104 RSKDPNRQVGACLVSQEGIILGIGYNGFPRGCSDNKLPWAKKS 146
>gi|420177905|ref|ZP_14684239.1| ComE operon protein 2 [Staphylococcus epidermidis NIHLM057]
gi|420181394|ref|ZP_14687595.1| ComE operon protein 2 [Staphylococcus epidermidis NIHLM053]
gi|394246310|gb|EJD91570.1| ComE operon protein 2 [Staphylococcus epidermidis NIHLM053]
gi|394247092|gb|EJD92340.1| ComE operon protein 2 [Staphylococcus epidermidis NIHLM057]
Length = 153
Score = 79.7 bits (195), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 50/119 (42%), Positives = 66/119 (55%), Gaps = 6/119 (5%)
Query: 87 DVLEWHEYFMASAFLVAKRSKDPVTRVGAVIVNEDNKIVGTGYNGMPIGCSD--DEFPWD 144
D ++W EYFMA + L+A RS VGA IV +DN+I+ GYNG G DE
Sbjct: 2 DRIKWEEYFMAQSHLLALRSTCKRLSVGATIV-KDNRIIAGGYNGSVAGEVHCIDEGCLI 60
Query: 145 KNTHDELDMCHAEMNAILN--KNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIYMCD 201
++ H + HAEMNA+L K T+ +Y + FPC C K IIQ+GIK + Y D
Sbjct: 61 EDGHC-IRTIHAEMNALLQCAKQGVSTEGATIYVTHFPCLNCTKSIIQAGIKTIYYAQD 118
Score = 42.7 bits (99), Expect = 0.081, Method: Compositional matrix adjust.
Identities = 22/53 (41%), Positives = 28/53 (52%), Gaps = 2/53 (3%)
Query: 1 MNAILN--KNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIYMCDKHKQKPA 51
MNA+L K T+ +Y + FPC C K IIQ+GIK + Y D H A
Sbjct: 73 MNALLQCAKQGVSTEGATIYVTHFPCLNCTKSIIQAGIKTIYYAQDYHNHDYA 125
>gi|193212376|ref|YP_001998329.1| zinc-binding CMP/dCMP deaminase [Chlorobaculum parvum NCIB 8327]
gi|193085853|gb|ACF11129.1| CMP/dCMP deaminase zinc-binding [Chlorobaculum parvum NCIB 8327]
Length = 173
Score = 79.7 bits (195), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 47/122 (38%), Positives = 66/122 (54%), Gaps = 13/122 (10%)
Query: 89 LEWHEYFMASAFLVAKRSKDPVTRVGAVIVNEDNKIVGTGYNGMPIG---CSDDEFPWDK 145
L WHEYFM A L+++R+ +GAVIV DN I+ TGYNG P G C++ +
Sbjct: 25 LGWHEYFMCVAHLISRRATCTRGHIGAVIV-RDNNILSTGYNGAPSGLPHCNETNCKIYR 83
Query: 146 NTHDE-------LDMCHAEMNAILN--KNSADTKRCKLYTSLFPCNECAKVIIQSGIKEV 196
+TH + ++ HAE+NAI K+ K +Y + PC C KV+I GIK +
Sbjct: 84 STHPDGTVEENCVNTIHAEINAIAQAAKHGVSIKDADIYITASPCIHCLKVLINVGIKTI 143
Query: 197 IY 198
Y
Sbjct: 144 YY 145
>gi|78188600|ref|YP_378938.1| deoxycytidylate deaminase [Chlorobium chlorochromatii CaD3]
gi|78170799|gb|ABB27895.1| deoxycytidylate deaminase, putative [Chlorobium chlorochromatii
CaD3]
Length = 173
Score = 79.7 bits (195), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 48/122 (39%), Positives = 66/122 (54%), Gaps = 13/122 (10%)
Query: 89 LEWHEYFMASAFLVAKRSKDPVTRVGAVIVNEDNKIVGTGYNGMPIG---CSDDEFPWDK 145
L W EYFM+ A LV++R+ +GAVIV E+N I+ TGYNG P G C DD +
Sbjct: 21 LSWDEYFMSVAHLVSRRATCTRAHIGAVIVRENN-ILSTGYNGAPTGLPHCHDDNCRIYR 79
Query: 146 NTHDE-------LDMCHAEMNAILN--KNSADTKRCKLYTSLFPCNECAKVIIQSGIKEV 196
TH + ++ HAE+NAI K+ + +Y + PC C KV+I GIK +
Sbjct: 80 CTHPDGTVEENCVNTIHAEINAIAQAAKHGISIRDSDIYITASPCIHCLKVLINVGIKTI 139
Query: 197 IY 198
Y
Sbjct: 140 YY 141
>gi|406671833|ref|ZP_11079072.1| ComE operon protein 2 [Facklamia hominis CCUG 36813]
gi|405581083|gb|EKB55142.1| ComE operon protein 2 [Facklamia hominis CCUG 36813]
Length = 160
Score = 79.7 bits (195), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 49/121 (40%), Positives = 70/121 (57%), Gaps = 10/121 (8%)
Query: 87 DVLEWHEYFMASAFLVAKRSKDPVTRVGAVIVNEDNKIVGTGYNGMPIG---CSDDE-FP 142
D + W +YFMA + +++ RS VGAVIV +N+I+ TGYNG G C D F
Sbjct: 2 DRISWTDYFMAQSLVISTRSTCDRLMVGAVIV-RNNRIIATGYNGSVSGLTHCIDHGCFV 60
Query: 143 WDKNTHDELDMCHAEMNAILN--KNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIYMC 200
D + + HAE+NA++ K T ++Y + FPC C+KVIIQ+GIK+V Y+
Sbjct: 61 VDGHC---IRTIHAEVNAVIQCAKMGISTDGAEIYITHFPCYNCSKVIIQAGIKQVHYLY 117
Query: 201 D 201
D
Sbjct: 118 D 118
Score = 43.9 bits (102), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 28/84 (33%), Positives = 40/84 (47%), Gaps = 14/84 (16%)
Query: 1 MNAILN--KNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIYMCDKHKQKPATIASKRM 58
+NA++ K T ++Y + FPC C+KVIIQ+GIK+V Y+ D H
Sbjct: 73 VNAVIQCAKMGISTDGAEIYITHFPCYNCSKVIIQAGIKQVHYLYDYHN----------- 121
Query: 59 FDAAKVHYWSEMDKMNGVQNGSPH 82
D + +SE D SPH
Sbjct: 122 -DPNAIDLFSECDIQVSKHELSPH 144
>gi|343500808|ref|ZP_08738696.1| deoxycytidylate deaminase [Vibrio tubiashii ATCC 19109]
gi|418480742|ref|ZP_13049797.1| deoxycytidylate deaminase [Vibrio tubiashii NCIMB 1337 = ATCC
19106]
gi|342819787|gb|EGU54623.1| deoxycytidylate deaminase [Vibrio tubiashii ATCC 19109]
gi|384571502|gb|EIF02033.1| deoxycytidylate deaminase [Vibrio tubiashii NCIMB 1337 = ATCC
19106]
Length = 153
Score = 79.7 bits (195), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 47/109 (43%), Positives = 59/109 (54%), Gaps = 3/109 (2%)
Query: 88 VLEWHEYFMASAFLVAKRSKDPVTRVGAVIVNEDNKIVGTGYNGMPIGCSDDEFPWDKNT 147
+ +W + F A LV SKDP T+VGAVI + N+IV G+NG P G SD D
Sbjct: 2 ISKWAQRFYQMAELVGSWSKDPSTQVGAVITKQ-NRIVSVGFNGYPHGISDSAMT-DDRE 59
Query: 148 HDELDMCHAEMNAILNKNSADTKRCKLYTSLFPCNECAKVIIQSGIKEV 196
L HAE NAIL D C+++ + FPC CA IIQ+GI V
Sbjct: 60 MKYLKTLHAEENAILFAKR-DLDGCEIWVTHFPCPNCAAKIIQTGISAV 107
>gi|222153659|ref|YP_002562836.1| cytidine and deoxycytidylate deaminase [Streptococcus uberis 0140J]
gi|222114472|emb|CAR43320.1| putative cytidine and deoxycytidylate deaminase [Streptococcus
uberis 0140J]
Length = 151
Score = 79.7 bits (195), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 46/114 (40%), Positives = 67/114 (58%), Gaps = 6/114 (5%)
Query: 89 LEWHEYFMASAFLVAKRSKDPVTRVGAVIVNEDNKIVGTGYNGMPIGCSD--DEFPWDKN 146
L W +YFMA+A L++KRS VGAV+V +DN+I+ TGYNG + +D DE
Sbjct: 5 LSWQDYFMANAELISKRSTCDRAYVGAVLV-KDNRIIATGYNG-GVSATDNCDEAGHYME 62
Query: 147 THDELDMCHAEMNAILN--KNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIY 198
+ HAEMNA++ K T ++Y + FPC C K ++Q+GIK++ Y
Sbjct: 63 DGHCIRTVHAEMNALIQCAKEGISTDGTEIYVTHFPCINCTKALLQAGIKKITY 116
Score = 37.7 bits (86), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 20/60 (33%), Positives = 32/60 (53%), Gaps = 5/60 (8%)
Query: 1 MNAILN--KNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIYMCDKHKQKPATIASKRM 58
MNA++ K T ++Y + FPC C K ++Q+GIK++ Y K +P A + M
Sbjct: 74 MNALIQCAKEGISTDGTEIYVTHFPCINCTKALLQAGIKKITY---KAHYRPHPFAIELM 130
>gi|261250832|ref|ZP_05943406.1| putative deoxycytidylate deaminase [Vibrio orientalis CIP 102891 =
ATCC 33934]
gi|417953963|ref|ZP_12597004.1| deoxycytidylate deaminase [Vibrio orientalis CIP 102891 = ATCC
33934]
gi|260937705|gb|EEX93693.1| putative deoxycytidylate deaminase [Vibrio orientalis CIP 102891 =
ATCC 33934]
gi|342816231|gb|EGU51133.1| deoxycytidylate deaminase [Vibrio orientalis CIP 102891 = ATCC
33934]
Length = 149
Score = 79.7 bits (195), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 47/109 (43%), Positives = 59/109 (54%), Gaps = 3/109 (2%)
Query: 88 VLEWHEYFMASAFLVAKRSKDPVTRVGAVIVNEDNKIVGTGYNGMPIGCSDDEFPWDKNT 147
+ +W + F A LV SKDP T+VGAVI + N+IV G+NG P G SD D
Sbjct: 2 ISKWAQRFYQMAELVGSWSKDPSTQVGAVITKQ-NRIVSVGFNGYPHGISDSAMT-DDRE 59
Query: 148 HDELDMCHAEMNAILNKNSADTKRCKLYTSLFPCNECAKVIIQSGIKEV 196
L HAE NAIL D C+++ + FPC CA IIQ+GI V
Sbjct: 60 MKYLKTLHAEENAILFAKR-DLDGCEIWVTHFPCPNCAAKIIQTGISAV 107
>gi|424029870|ref|ZP_17769371.1| cytidine and deoxycytidylate deaminase zinc-binding region family
protein [Vibrio cholerae HENC-01]
gi|424039984|ref|ZP_17778242.1| cytidine and deoxycytidylate deaminase zinc-binding region family
protein [Vibrio cholerae HENC-02]
gi|408883545|gb|EKM22327.1| cytidine and deoxycytidylate deaminase zinc-binding region family
protein [Vibrio cholerae HENC-01]
gi|408892364|gb|EKM29888.1| cytidine and deoxycytidylate deaminase zinc-binding region family
protein [Vibrio cholerae HENC-02]
Length = 152
Score = 79.3 bits (194), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 48/109 (44%), Positives = 61/109 (55%), Gaps = 3/109 (2%)
Query: 88 VLEWHEYFMASAFLVAKRSKDPVTRVGAVIVNEDNKIVGTGYNGMPIGCSDDEFPWDKNT 147
+ +W + F A LVA SKDP T+VGAVI + N+IV G+NG P G S D D+
Sbjct: 2 ISKWEKRFYQMAELVASWSKDPSTQVGAVITKQ-NRIVSVGFNGYPHGVS-DSVDTDERE 59
Query: 148 HDELDMCHAEMNAILNKNSADTKRCKLYTSLFPCNECAKVIIQSGIKEV 196
L HAE NAIL + D C ++ + FPC CA IIQ+GI V
Sbjct: 60 LKYLKTLHAEENAILF-SKRDLDGCDIWVTHFPCPNCAAKIIQTGIARV 107
>gi|323493550|ref|ZP_08098672.1| putative deoxycytidylate deaminase [Vibrio brasiliensis LMG 20546]
gi|323312373|gb|EGA65515.1| putative deoxycytidylate deaminase [Vibrio brasiliensis LMG 20546]
Length = 149
Score = 79.3 bits (194), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 47/109 (43%), Positives = 59/109 (54%), Gaps = 3/109 (2%)
Query: 88 VLEWHEYFMASAFLVAKRSKDPVTRVGAVIVNEDNKIVGTGYNGMPIGCSDDEFPWDKNT 147
+ +W + F A LV SKDP T+VGAVI + N+IV G+NG P G SD D
Sbjct: 2 ISKWAQRFYQMAELVGSWSKDPSTQVGAVITKQ-NRIVSVGFNGYPHGISDSAMT-DDRE 59
Query: 148 HDELDMCHAEMNAILNKNSADTKRCKLYTSLFPCNECAKVIIQSGIKEV 196
L HAE NAIL D C+++ + FPC CA IIQ+GI V
Sbjct: 60 MKYLKTLHAEENAILFAKR-DLDGCEIWVTHFPCPNCAAKIIQTGISAV 107
>gi|448926687|gb|AGE50263.1| dCMP deaminase [Acanthocystis turfacea Chlorella virus Canal-1]
Length = 144
Score = 79.3 bits (194), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 39/106 (36%), Positives = 66/106 (62%), Gaps = 3/106 (2%)
Query: 94 YFMASAFLVAKRSKDPVTRVGAVIVNEDNKIVGTGYNGMPIGCSDDEFPWDKNTHDELDM 153
++ S + SKDP T+V A++++ ++ I+ GYNG+P G + + W K T + +
Sbjct: 7 FYALSCYHAELFSKDPNTKVAAMVIDNNHNILSVGYNGLPRGFEETQERWAKPTKYQY-V 65
Query: 154 CHAEMNAILN--KNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVI 197
HAE NAI +N A + ++LFPC++CA++IIQSGI++V+
Sbjct: 66 VHAEANAICTAARNGAKLDGGSIVSTLFPCDQCARLIIQSGIRKVV 111
Score = 40.8 bits (94), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 15/34 (44%), Positives = 26/34 (76%)
Query: 7 KNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVI 40
+N A + ++LFPC++CA++IIQSGI++V+
Sbjct: 78 RNGAKLDGGSIVSTLFPCDQCARLIIQSGIRKVV 111
>gi|392329923|ref|ZP_10274539.1| ComE operon protein 2 [Streptococcus canis FSL Z3-227]
gi|391419795|gb|EIQ82606.1| ComE operon protein 2 [Streptococcus canis FSL Z3-227]
Length = 153
Score = 79.3 bits (194), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 47/116 (40%), Positives = 69/116 (59%), Gaps = 10/116 (8%)
Query: 89 LEWHEYFMASAFLVAKRSKDPVTRVGAVIVNEDNKIVGTGYNGMPIGCSDDEFPWDKNTH 148
L W +YFMA+A L++KRS VGAV+V +DN+I+ TGYNG G S + + +
Sbjct: 5 LSWQDYFMANAELISKRSTCDRAFVGAVLV-KDNRIIATGYNG---GVSATDNCNETGHY 60
Query: 149 DELDMC----HAEMNAILN--KNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIY 198
E C HAEMNA++ K+ T ++Y + FPC C K ++Q+GIK++ Y
Sbjct: 61 MEDGHCIRTVHAEMNALIQCAKDGISTDGTEIYVTHFPCINCTKALLQAGIKKITY 116
Score = 38.5 bits (88), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 20/60 (33%), Positives = 33/60 (55%), Gaps = 5/60 (8%)
Query: 1 MNAILN--KNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIYMCDKHKQKPATIASKRM 58
MNA++ K+ T ++Y + FPC C K ++Q+GIK++ Y K +P A + M
Sbjct: 74 MNALIQCAKDGISTDGTEIYVTHFPCINCTKALLQAGIKKITY---KAHYRPHPFAIELM 130
>gi|314933760|ref|ZP_07841125.1| ComE operon protein 2 [Staphylococcus caprae C87]
gi|313653910|gb|EFS17667.1| ComE operon protein 2 [Staphylococcus caprae C87]
Length = 153
Score = 79.3 bits (194), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 50/117 (42%), Positives = 65/117 (55%), Gaps = 6/117 (5%)
Query: 89 LEWHEYFMASAFLVAKRSKDPVTRVGAVIVNEDNKIVGTGYNGMPIGCSD--DEFPWDKN 146
++W EYFMA + L+A RS VGA IV +DN+I+ GYNG G DE ++
Sbjct: 4 IKWEEYFMAQSHLLALRSTCQRLSVGATIV-KDNRIIAGGYNGSVAGEVHCIDEGCLIED 62
Query: 147 THDELDMCHAEMNAILN--KNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIYMCD 201
H + HAEMNA+L K T+ +Y + FPC C K IIQSGIK + Y D
Sbjct: 63 GHC-IRTIHAEMNALLQCAKQGVSTEGATIYVTHFPCLNCTKSIIQSGIKTIYYAED 118
Score = 43.9 bits (102), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 23/53 (43%), Positives = 28/53 (52%), Gaps = 2/53 (3%)
Query: 1 MNAILN--KNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIYMCDKHKQKPA 51
MNA+L K T+ +Y + FPC C K IIQSGIK + Y D H A
Sbjct: 73 MNALLQCAKQGVSTEGATIYVTHFPCLNCTKSIIQSGIKTIYYAEDYHNHNYA 125
>gi|149917706|ref|ZP_01906202.1| Deoxycytidylate deaminase [Plesiocystis pacifica SIR-1]
gi|149821488|gb|EDM80888.1| Deoxycytidylate deaminase [Plesiocystis pacifica SIR-1]
Length = 154
Score = 79.3 bits (194), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 40/112 (35%), Positives = 60/112 (53%), Gaps = 2/112 (1%)
Query: 89 LEWHEYFMASAFLVAKRSKDPVTRVGAVIVNEDNKIVGTGYNGMPIGCSDDEFPWDKNTH 148
L+W F+ A ++ SKDP T+VG V+V D +I G+NG+P G D
Sbjct: 3 LKWDRRFLELARHISGWSKDPSTQVGCVVVGPDREIRSAGFNGLPRGIEDSAKRLQDRAL 62
Query: 149 DELDMCHAEMNAILN--KNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIY 198
+CHAE NAI++ + K C Y + PC CA+ +IQ+G+ EV++
Sbjct: 63 KYPLICHAEENAIMHAARIGVALKGCTAYVTWPPCTRCARSLIQAGVDEVVF 114
>gi|395238691|ref|ZP_10416602.1| dCMP deaminase [Lactobacillus gigeriorum CRBIP 24.85]
gi|394477368|emb|CCI86579.1| dCMP deaminase [Lactobacillus gigeriorum CRBIP 24.85]
Length = 162
Score = 79.3 bits (194), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 44/119 (36%), Positives = 67/119 (56%), Gaps = 12/119 (10%)
Query: 87 DVLEWHEYFMASAFLVAKRSKDPVTRVGAVIVNEDNKIVGTGYNGMPIGCSDDEFPWDKN 146
D + W +YFM A ++A+RS VG+V+V +DN+I+GTGYNG G + D+
Sbjct: 3 DRIPWKQYFMMQALVIAQRSTCNRALVGSVLV-KDNRIIGTGYNGAVTG----QPHCDEV 57
Query: 147 THDELD-----MCHAEMNAILN--KNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIY 198
H +D H+E+N++ KN T ++Y + FPC C K +IQSG+K + Y
Sbjct: 58 GHQMVDGHCVRTIHSEINSLTQCAKNGVSTSNTEIYVTHFPCYNCTKALIQSGVKRINY 116
Score = 38.9 bits (89), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 15/35 (42%), Positives = 21/35 (60%)
Query: 7 KNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIY 41
KN T ++Y + FPC C K +IQSG+K + Y
Sbjct: 82 KNGVSTSNTEIYVTHFPCYNCTKALIQSGVKRINY 116
>gi|158428667|pdb|2HVV|A Chain A, Crystal Structure Of Dcmp Deaminase From Streptococcus
Mutans
gi|158428668|pdb|2HVV|B Chain B, Crystal Structure Of Dcmp Deaminase From Streptococcus
Mutans
gi|158428669|pdb|2HVW|A Chain A, Crystal Structure Of Dcmp Deaminase From Streptococcus
Mutans
gi|158428670|pdb|2HVW|B Chain B, Crystal Structure Of Dcmp Deaminase From Streptococcus
Mutans
gi|158428671|pdb|2HVW|C Chain C, Crystal Structure Of Dcmp Deaminase From Streptococcus
Mutans
Length = 184
Score = 79.3 bits (194), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 53/140 (37%), Positives = 75/140 (53%), Gaps = 17/140 (12%)
Query: 68 SEMDKMNGVQN---GSPHKRVDDVLEWHEYFMASAFLVAKRSKDPVTRVGAVIVNEDNKI 124
S M M G Q GS R L W +YFMA+A L++KRS VGAV+V ++N+I
Sbjct: 19 SHMASMTGGQQMGRGSMTNR----LSWQDYFMANAELISKRSTCNRAYVGAVLV-KNNRI 73
Query: 125 VGTGYNGMPIGCSDDEFPWDKNTHDELDMC----HAEMNAILN--KNSADTKRCKLYTSL 178
+ TGYNG G +D + D E C HAEMNA++ K ++Y +
Sbjct: 74 IATGYNG---GVADTDNCDDVGHEMEDGHCIRTVHAEMNALIQCAKEGISANNTEIYVTH 130
Query: 179 FPCNECAKVIIQSGIKEVIY 198
FPC C K ++Q+G+K++ Y
Sbjct: 131 FPCINCTKALLQAGVKKITY 150
>gi|299143279|ref|ZP_07036359.1| cytidine/deoxycytidylate deaminase family protein [Peptoniphilus
sp. oral taxon 386 str. F0131]
gi|298517764|gb|EFI41503.1| cytidine/deoxycytidylate deaminase family protein [Peptoniphilus
sp. oral taxon 386 str. F0131]
Length = 143
Score = 79.3 bits (194), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 48/111 (43%), Positives = 59/111 (53%), Gaps = 3/111 (2%)
Query: 91 WHEYFMASAFLVAKRSKDPVTRVGAVIVNEDNKIVGTGYNGMPIGCSD-DEFPWDKNTHD 149
W+EYFM +VA RS VG VIVN+D++IV TGYNG G DE
Sbjct: 5 WNEYFMEITEMVAIRSTCDRAFVGCVIVNKDHRIVSTGYNGSLAGNPQCDEIGHTMRDGH 64
Query: 150 ELDMCHAEMNAIL--NKNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIY 198
+ HAEMNA+L K K C Y + FPC C K +IQ+GIK + Y
Sbjct: 65 CIATIHAEMNALLYCAKEGIPVKDCVAYVTHFPCLNCTKSLIQAGIKAIYY 115
Score = 37.7 bits (86), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 19/43 (44%), Positives = 24/43 (55%), Gaps = 2/43 (4%)
Query: 1 MNAIL--NKNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIY 41
MNA+L K K C Y + FPC C K +IQ+GIK + Y
Sbjct: 73 MNALLYCAKEGIPVKDCVAYVTHFPCLNCTKSLIQAGIKAIYY 115
>gi|320158842|ref|YP_004191220.1| DCMP deaminase [Vibrio vulnificus MO6-24/O]
gi|319934154|gb|ADV89017.1| DCMP deaminase [Vibrio vulnificus MO6-24/O]
Length = 152
Score = 79.3 bits (194), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 48/109 (44%), Positives = 62/109 (56%), Gaps = 3/109 (2%)
Query: 88 VLEWHEYFMASAFLVAKRSKDPVTRVGAVIVNEDNKIVGTGYNGMPIGCSDDEFPWDKNT 147
+ +W + F A LVA SKDP T+VGAVI + N+IV G+NG P G SD D+
Sbjct: 2 ISKWAKRFYQMAELVASWSKDPSTQVGAVITKQ-NRIVSVGFNGYPHGVSDS-VDTDERE 59
Query: 148 HDELDMCHAEMNAILNKNSADTKRCKLYTSLFPCNECAKVIIQSGIKEV 196
L HAE NAIL + D C+++ + FPC CA IIQ+GI V
Sbjct: 60 LKYLKTLHAEENAILF-SKRDLDGCEIWVTHFPCPNCAAKIIQTGISRV 107
>gi|37676740|ref|NP_937136.1| deoxycytidylate deaminase [Vibrio vulnificus YJ016]
gi|37201283|dbj|BAC97106.1| deoxycytidylate deaminase [Vibrio vulnificus YJ016]
Length = 152
Score = 79.3 bits (194), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 48/109 (44%), Positives = 62/109 (56%), Gaps = 3/109 (2%)
Query: 88 VLEWHEYFMASAFLVAKRSKDPVTRVGAVIVNEDNKIVGTGYNGMPIGCSDDEFPWDKNT 147
+ +W + F A LVA SKDP T+VGAVI + N+IV G+NG P G S D D+
Sbjct: 2 ISKWAKRFYQMAELVASWSKDPSTQVGAVITKQ-NRIVSVGFNGYPHGVS-DSVDTDERE 59
Query: 148 HDELDMCHAEMNAILNKNSADTKRCKLYTSLFPCNECAKVIIQSGIKEV 196
L HAE NAIL + D C+++ + FPC CA IIQ+GI V
Sbjct: 60 LKYLKTLHAEENAILF-SKRDLDGCEIWVTHFPCPNCAAKIIQTGISRV 107
>gi|410460456|ref|ZP_11314134.1| ComE operon protein 2 [Bacillus azotoformans LMG 9581]
gi|409927071|gb|EKN64217.1| ComE operon protein 2 [Bacillus azotoformans LMG 9581]
Length = 155
Score = 79.3 bits (194), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 50/119 (42%), Positives = 65/119 (54%), Gaps = 10/119 (8%)
Query: 89 LEWHEYFMASAFLVAKRSKDPVTRVGAVIVNEDNKIVGTGYNGMPIG---CSDDE-FPWD 144
+ W++YFMA + L+A RS RVGA IV D +I+ GYNG G C DD + D
Sbjct: 4 ISWNQYFMAQSHLLALRSTCTRLRVGATIV-RDKRIIAGGYNGSVTGQTHCIDDGCYVID 62
Query: 145 KNTHDELDMCHAEMNAILN--KNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIYMCD 201
+ + HAE+NAIL K T ++Y + FPC C K IIQSGIK + Y D
Sbjct: 63 NHC---IRTIHAEVNAILQCAKFGVQTDGAEIYVTHFPCVHCTKAIIQSGIKALYYAED 118
Score = 41.2 bits (95), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 23/55 (41%), Positives = 30/55 (54%), Gaps = 3/55 (5%)
Query: 1 MNAILN--KNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIYMCDKHKQKPATI 53
+NAIL K T ++Y + FPC C K IIQSGIK +Y + +K P I
Sbjct: 73 VNAILQCAKFGVQTDGAEIYVTHFPCVHCTKAIIQSGIK-ALYYAEDYKNHPYAI 126
>gi|343514246|ref|ZP_08751326.1| putative deoxycytidylate deaminase [Vibrio sp. N418]
gi|342800558|gb|EGU36076.1| putative deoxycytidylate deaminase [Vibrio sp. N418]
Length = 151
Score = 79.3 bits (194), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 47/109 (43%), Positives = 60/109 (55%), Gaps = 3/109 (2%)
Query: 88 VLEWHEYFMASAFLVAKRSKDPVTRVGAVIVNEDNKIVGTGYNGMPIGCSDDEFPWDKNT 147
+ +W + F A LV SKDP T+VGAVI + N+IV G+NG P G SD D+
Sbjct: 2 ISKWAQRFYQMAELVGSWSKDPSTQVGAVITKQ-NRIVSVGFNGYPHGISDSAET-DERE 59
Query: 148 HDELDMCHAEMNAILNKNSADTKRCKLYTSLFPCNECAKVIIQSGIKEV 196
L HAE NAIL D C+++ + FPC CA IIQ+GI V
Sbjct: 60 MKYLKTLHAEENAILFAKR-DLDGCEIWVTHFPCPNCAAKIIQTGISAV 107
>gi|358051610|ref|ZP_09145790.1| competence protein ComEB [Staphylococcus simiae CCM 7213]
gi|357258902|gb|EHJ08779.1| competence protein ComEB [Staphylococcus simiae CCM 7213]
Length = 153
Score = 79.3 bits (194), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 50/118 (42%), Positives = 63/118 (53%), Gaps = 8/118 (6%)
Query: 89 LEWHEYFMASAFLVAKRSKDPVTRVGAVIVNEDNKIVGTGYNGMPIG---CSDDEFPWDK 145
++W EYFMA + L+A RS VGA IV +DN+I+ GYNG G C DD +
Sbjct: 4 IKWEEYFMAQSHLLALRSTCQRLSVGATIV-KDNRIIAGGYNGSVAGEVHCIDDGCLIED 62
Query: 146 NTHDELDMCHAEMNAILN--KNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIYMCD 201
+ HAEMNA+L K T +Y + FPC C K IIQ+GIK V Y D
Sbjct: 63 G--HCIRTIHAEMNALLQCAKQGVSTDGATIYVTHFPCLNCTKSIIQAGIKYVYYAQD 118
Score = 43.1 bits (100), Expect = 0.067, Method: Compositional matrix adjust.
Identities = 23/53 (43%), Positives = 28/53 (52%), Gaps = 2/53 (3%)
Query: 1 MNAILN--KNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIYMCDKHKQKPA 51
MNA+L K T +Y + FPC C K IIQ+GIK V Y D H + A
Sbjct: 73 MNALLQCAKQGVSTDGATIYVTHFPCLNCTKSIIQAGIKYVYYAQDYHNHEYA 125
>gi|417896778|ref|ZP_12540721.1| ComE operon protein 2 [Staphylococcus aureus subsp. aureus 21235]
gi|341840044|gb|EGS81564.1| ComE operon protein 2 [Staphylococcus aureus subsp. aureus 21235]
Length = 153
Score = 79.3 bits (194), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 49/117 (41%), Positives = 65/117 (55%), Gaps = 6/117 (5%)
Query: 89 LEWHEYFMASAFLVAKRSKDPVTRVGAVIVNEDNKIVGTGYNGMPIGCSD--DEFPWDKN 146
++W EYFMA + L+A RS VGA IV +DN+I+ GYNG G DE ++
Sbjct: 4 IKWEEYFMAQSHLLALRSTCQRLSVGATIV-KDNRIIAGGYNGSVAGEVHCIDEGCLIED 62
Query: 147 THDELDMCHAEMNAILN--KNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIYMCD 201
H + HAEMNA+L K T+ +Y + FPC C K IIQ+GIK + Y D
Sbjct: 63 GHC-IRTIHAEMNALLQCAKQGVSTESATIYVTHFPCLNCTKSIIQAGIKRIYYAED 118
Score = 45.8 bits (107), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 23/54 (42%), Positives = 30/54 (55%), Gaps = 2/54 (3%)
Query: 1 MNAILN--KNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIYMCDKHKQKPAT 52
MNA+L K T+ +Y + FPC C K IIQ+GIK + Y D H + AT
Sbjct: 73 MNALLQCAKQGVSTESATIYVTHFPCLNCTKSIIQAGIKRIYYAEDYHNHEYAT 126
>gi|27366964|ref|NP_762491.1| deoxycytidylate deaminase [Vibrio vulnificus CMCP6]
gi|27358531|gb|AAO07481.1|AE016809_243 Deoxycytidylate deaminase [Vibrio vulnificus CMCP6]
Length = 152
Score = 79.0 bits (193), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 48/109 (44%), Positives = 62/109 (56%), Gaps = 3/109 (2%)
Query: 88 VLEWHEYFMASAFLVAKRSKDPVTRVGAVIVNEDNKIVGTGYNGMPIGCSDDEFPWDKNT 147
+ +W + F A LVA SKDP T+VGAVI + N+IV G+NG P G SD D+
Sbjct: 2 ISKWAKRFYQMAELVASWSKDPSTQVGAVITKQ-NRIVSVGFNGYPHGVSDS-VDTDERE 59
Query: 148 HDELDMCHAEMNAILNKNSADTKRCKLYTSLFPCNECAKVIIQSGIKEV 196
L HAE NAIL + D C+++ + FPC CA IIQ+GI V
Sbjct: 60 LKYLKTLHAEENAILF-SKRDLDGCEIWVTHFPCPNCAAKIIQTGISRV 107
>gi|269960107|ref|ZP_06174484.1| deoxycytidylate deaminase, putative [Vibrio harveyi 1DA3]
gi|424043898|ref|ZP_17781521.1| cytidine and deoxycytidylate deaminase zinc-binding region family
protein [Vibrio cholerae HENC-03]
gi|269835406|gb|EEZ89488.1| deoxycytidylate deaminase, putative [Vibrio harveyi 1DA3]
gi|408888427|gb|EKM26888.1| cytidine and deoxycytidylate deaminase zinc-binding region family
protein [Vibrio cholerae HENC-03]
Length = 152
Score = 79.0 bits (193), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 48/109 (44%), Positives = 62/109 (56%), Gaps = 3/109 (2%)
Query: 88 VLEWHEYFMASAFLVAKRSKDPVTRVGAVIVNEDNKIVGTGYNGMPIGCSDDEFPWDKNT 147
+ +W + F A LVA SKDP T+VGAVI ++N+IV G+NG P G S D D+
Sbjct: 2 ISKWEKRFYQMAELVASWSKDPSTQVGAVI-TKNNRIVSVGFNGYPHGVS-DSVDTDERE 59
Query: 148 HDELDMCHAEMNAILNKNSADTKRCKLYTSLFPCNECAKVIIQSGIKEV 196
L HAE NAIL + D C ++ + FPC CA IIQ+GI V
Sbjct: 60 LKYLKTLHAEENAILF-SKRDLDGCDIWVTHFPCPNCAAKIIQTGIARV 107
>gi|70726327|ref|YP_253241.1| late competence operon required for DNA binding and uptake
[Staphylococcus haemolyticus JCSC1435]
gi|68447051|dbj|BAE04635.1| late competence operon required for DNA binding and uptake
[Staphylococcus haemolyticus JCSC1435]
Length = 152
Score = 79.0 bits (193), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 50/117 (42%), Positives = 65/117 (55%), Gaps = 6/117 (5%)
Query: 89 LEWHEYFMASAFLVAKRSKDPVTRVGAVIVNEDNKIVGTGYNGMPIGCSD--DEFPWDKN 146
L+W EYFMA + L+A RS VGA IV +DN+I+ GYNG G DE ++
Sbjct: 4 LKWDEYFMAQSHLLALRSTCQRLSVGATIV-KDNRIIAGGYNGSVAGEVHCIDEGCLIED 62
Query: 147 THDELDMCHAEMNAILN--KNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIYMCD 201
H + HAEMNA+L K T +Y + FPC C K IIQ+GIK++ Y D
Sbjct: 63 GHC-IRTIHAEMNALLQCAKQGVSTDGATIYVTHFPCLNCTKSIIQAGIKQIYYAED 118
Score = 46.6 bits (109), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 26/68 (38%), Positives = 34/68 (50%), Gaps = 6/68 (8%)
Query: 1 MNAILN--KNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIYMCDKHKQKPATIASKRM 58
MNA+L K T +Y + FPC C K IIQ+GIK++ Y D H K A +
Sbjct: 73 MNALLQCAKQGVSTDGATIYVTHFPCLNCTKSIIQAGIKQIYYAEDYHNHKYAL----EL 128
Query: 59 FDAAKVHY 66
D A + Y
Sbjct: 129 LDQAGIDY 136
>gi|388598498|ref|ZP_10156894.1| deoxycytidylate deaminase [Vibrio campbellii DS40M4]
gi|444427910|ref|ZP_21223274.1| deoxycytidylate deaminase [Vibrio campbellii CAIM 519 = NBRC 15631]
gi|444238859|gb|ELU50446.1| deoxycytidylate deaminase [Vibrio campbellii CAIM 519 = NBRC 15631]
Length = 152
Score = 79.0 bits (193), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 48/109 (44%), Positives = 62/109 (56%), Gaps = 3/109 (2%)
Query: 88 VLEWHEYFMASAFLVAKRSKDPVTRVGAVIVNEDNKIVGTGYNGMPIGCSDDEFPWDKNT 147
+ +W + F A LVA SKDP T+VGAVI ++N+IV G+NG P G S D D+
Sbjct: 2 ISKWEKRFYQMAELVASWSKDPSTQVGAVI-TKNNRIVSVGFNGYPHGVS-DSVDTDERE 59
Query: 148 HDELDMCHAEMNAILNKNSADTKRCKLYTSLFPCNECAKVIIQSGIKEV 196
L HAE NAIL + D C ++ + FPC CA IIQ+GI V
Sbjct: 60 LKYLKTLHAEENAILF-SKRDLDGCDIWVTHFPCPNCAAKIIQTGIARV 107
>gi|343505536|ref|ZP_08743106.1| putative deoxycytidylate deaminase [Vibrio ichthyoenteri ATCC
700023]
gi|342807506|gb|EGU42694.1| putative deoxycytidylate deaminase [Vibrio ichthyoenteri ATCC
700023]
Length = 151
Score = 79.0 bits (193), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 47/109 (43%), Positives = 60/109 (55%), Gaps = 3/109 (2%)
Query: 88 VLEWHEYFMASAFLVAKRSKDPVTRVGAVIVNEDNKIVGTGYNGMPIGCSDDEFPWDKNT 147
+ +W + F A LV SKDP T+VGAVI + N+IV G+NG P G SD D+
Sbjct: 2 ISKWAQRFYQMAELVGSWSKDPSTQVGAVITKQ-NRIVSVGFNGYPHGISDSAET-DERE 59
Query: 148 HDELDMCHAEMNAILNKNSADTKRCKLYTSLFPCNECAKVIIQSGIKEV 196
L HAE NAIL D C+++ + FPC CA IIQ+GI V
Sbjct: 60 MKYLKTLHAEENAILFAKR-DLDGCEIWVTHFPCPNCAAKIIQTGISAV 107
>gi|343510611|ref|ZP_08747834.1| putative deoxycytidylate deaminase [Vibrio scophthalmi LMG 19158]
gi|342801580|gb|EGU37040.1| putative deoxycytidylate deaminase [Vibrio scophthalmi LMG 19158]
Length = 151
Score = 79.0 bits (193), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 47/109 (43%), Positives = 60/109 (55%), Gaps = 3/109 (2%)
Query: 88 VLEWHEYFMASAFLVAKRSKDPVTRVGAVIVNEDNKIVGTGYNGMPIGCSDDEFPWDKNT 147
+ +W + F A LV SKDP T+VGAVI + N+IV G+NG P G SD D+
Sbjct: 2 ISKWAQRFYQMAELVGSWSKDPSTQVGAVITKQ-NRIVSVGFNGYPHGISDSAET-DERE 59
Query: 148 HDELDMCHAEMNAILNKNSADTKRCKLYTSLFPCNECAKVIIQSGIKEV 196
L HAE NAIL D C+++ + FPC CA IIQ+GI V
Sbjct: 60 MKYLKTLHAEENAILFAKR-DLDGCEIWVTHFPCPNCAAKIIQTGISAV 107
>gi|153832876|ref|ZP_01985543.1| deoxycytidylate deaminase [Vibrio harveyi HY01]
gi|148870799|gb|EDL69698.1| deoxycytidylate deaminase [Vibrio harveyi HY01]
Length = 152
Score = 79.0 bits (193), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 48/109 (44%), Positives = 62/109 (56%), Gaps = 3/109 (2%)
Query: 88 VLEWHEYFMASAFLVAKRSKDPVTRVGAVIVNEDNKIVGTGYNGMPIGCSDDEFPWDKNT 147
+ +W + F A LVA SKDP T+VGAVI ++N+IV G+NG P G S D D+
Sbjct: 2 ISKWEKRFYQMAELVASWSKDPSTQVGAVI-TKNNRIVSVGFNGYPHGVS-DSVDTDERE 59
Query: 148 HDELDMCHAEMNAILNKNSADTKRCKLYTSLFPCNECAKVIIQSGIKEV 196
L HAE NAIL + D C ++ + FPC CA IIQ+GI V
Sbjct: 60 LKYLKTLHAEENAILF-SKRDLDGCDIWVTHFPCPNCAAKIIQTGIARV 107
>gi|440492524|gb|ELQ75085.1| Deoxycytidylate deaminase [Trachipleistophora hominis]
Length = 261
Score = 79.0 bits (193), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 50/117 (42%), Positives = 63/117 (53%), Gaps = 10/117 (8%)
Query: 91 WHEYFMASAFLVAKRSKDPVTRVGAVIVNEDNKIVGTGYNGMPIG---CSDDEFPW---D 144
W YFM A V+ RS VGAV+V + N+IV TGYNG +G C D P
Sbjct: 118 WETYFMDIATFVSHRSACAKRNVGAVLV-KGNRIVSTGYNGTAMGTLNCIDGGCPRCCSG 176
Query: 145 KNTHDELDMC---HAEMNAILNKNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIY 198
+ LD+C HAE +A++ S C LY +LFPC CAK IIQ+ IK VI+
Sbjct: 177 TPSGSNLDLCVCLHAEESAMMGVVSERLSGCDLYVTLFPCMLCAKKIIQAQIKRVIF 233
Score = 41.2 bits (95), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 22/64 (34%), Positives = 36/64 (56%), Gaps = 3/64 (4%)
Query: 2 NAILNKNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIYMCDKHKQKPATIASKRMFDA 61
+A++ S C LY +LFPC CAK IIQ+ IK VI+ K+ + + S+++ +
Sbjct: 194 SAMMGVVSERLSGCDLYVTLFPCMLCAKKIIQAQIKRVIF---KNYYCASDVESRKLLEE 250
Query: 62 AKVH 65
K+
Sbjct: 251 LKIE 254
>gi|269968353|ref|ZP_06182372.1| deoxycytidylate deaminase, putative [Vibrio alginolyticus 40B]
gi|269827039|gb|EEZ81354.1| deoxycytidylate deaminase, putative [Vibrio alginolyticus 40B]
Length = 156
Score = 79.0 bits (193), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 48/109 (44%), Positives = 61/109 (55%), Gaps = 3/109 (2%)
Query: 88 VLEWHEYFMASAFLVAKRSKDPVTRVGAVIVNEDNKIVGTGYNGMPIGCSDDEFPWDKNT 147
+ +W + F A LVA SKDP T+VGAVI + N+IV G+NG P G S D D+
Sbjct: 4 ISKWAKRFYQMAELVASWSKDPSTQVGAVITKQ-NRIVSVGFNGYPHGVS-DSVDTDERE 61
Query: 148 HDELDMCHAEMNAILNKNSADTKRCKLYTSLFPCNECAKVIIQSGIKEV 196
L HAE NAIL + D C ++ + FPC CA IIQ+GI V
Sbjct: 62 LKYLKTLHAEENAILF-SKRDLDGCDIWVTHFPCPNCAAKIIQTGISHV 109
>gi|407796163|ref|ZP_11143119.1| ComE operon protein 2 [Salimicrobium sp. MJ3]
gi|407019517|gb|EKE32233.1| ComE operon protein 2 [Salimicrobium sp. MJ3]
Length = 189
Score = 79.0 bits (193), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 51/119 (42%), Positives = 65/119 (54%), Gaps = 10/119 (8%)
Query: 89 LEWHEYFMASAFLVAKRSKDPVTRVGAVIVNEDNKIVGTGYNGMPIG---CSDDE-FPWD 144
+ W +YFMA A L+ RS VGAVIV E I G GYNG G C+D+ + D
Sbjct: 4 IAWDQYFMAQAHLLKSRSTCERLSVGAVIVREKRMIAG-GYNGSVTGGVHCTDEGCYVVD 62
Query: 145 KNTHDELDMCHAEMNAIL--NKNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIYMCD 201
+ + HAEMNA+L +K T+ ++Y S FPC C K IIQSGI+ V Y D
Sbjct: 63 GHC---IRTIHAEMNALLQCSKFGVATEGAEIYVSHFPCVHCTKAIIQSGIRAVYYGGD 118
Score = 45.4 bits (106), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 32/93 (34%), Positives = 48/93 (51%), Gaps = 8/93 (8%)
Query: 1 MNAIL--NKNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIYMCDKHKQKPATIASKRM 58
MNA+L +K T+ ++Y S FPC C K IIQSGI+ V Y D +K P + +
Sbjct: 73 MNALLQCSKFGVATEGAEIYVSHFPCVHCTKAIIQSGIRAVYYGGD-YKNHPYAV---EL 128
Query: 59 FDAAKVHYWSEMDKMNGVQNGSPHKRV-DDVLE 90
A VH E+ +++ R+ D++LE
Sbjct: 129 LQHAGVH-TEEVPSTVAIRDSEEETRLMDEMLE 160
>gi|312863405|ref|ZP_07723643.1| putative ComE operon protein 2 [Streptococcus vestibularis F0396]
gi|322516047|ref|ZP_08068984.1| competence protein comEB [Streptococcus vestibularis ATCC 49124]
gi|311100941|gb|EFQ59146.1| putative ComE operon protein 2 [Streptococcus vestibularis F0396]
gi|322125462|gb|EFX96808.1| competence protein comEB [Streptococcus vestibularis ATCC 49124]
Length = 151
Score = 79.0 bits (193), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 46/116 (39%), Positives = 69/116 (59%), Gaps = 10/116 (8%)
Query: 89 LEWHEYFMASAFLVAKRSKDPVTRVGAVIVNEDNKIVGTGYNGMPIGCSDDEFPWDKNTH 148
L W +YFMA+A L++KRS VGAV+V +DN+I+ TGYNG G S+ + + +
Sbjct: 5 LSWQDYFMANAELISKRSTCDRAFVGAVLV-KDNRIIATGYNG---GVSETDNCNEVGHY 60
Query: 149 DELDMC----HAEMNAILN--KNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIY 198
E C HAEMNA++ K TK ++Y + FPC C K ++Q+G+ ++ Y
Sbjct: 61 MEDGHCIRTVHAEMNALIQCAKEGISTKNTEIYVTHFPCINCTKALLQAGVVKITY 116
Score = 37.7 bits (86), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 19/60 (31%), Positives = 32/60 (53%), Gaps = 5/60 (8%)
Query: 1 MNAILN--KNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIYMCDKHKQKPATIASKRM 58
MNA++ K TK ++Y + FPC C K ++Q+G+ ++ Y K +P A + M
Sbjct: 74 MNALIQCAKEGISTKNTEIYVTHFPCINCTKALLQAGVVKITY---KANYRPHAFAIELM 130
>gi|302380955|ref|ZP_07269416.1| cytidine and deoxycytidylate deaminase zinc-binding region
[Finegoldia magna ACS-171-V-Col3]
gi|303235173|ref|ZP_07321793.1| cytidine and deoxycytidylate deaminase zinc-binding region
[Finegoldia magna BVS033A4]
gi|417925165|ref|ZP_12568592.1| cytidine and deoxycytidylate deaminase zinc-binding region
[Finegoldia magna SY403409CC001050417]
gi|302311176|gb|EFK93196.1| cytidine and deoxycytidylate deaminase zinc-binding region
[Finegoldia magna ACS-171-V-Col3]
gi|302493765|gb|EFL53551.1| cytidine and deoxycytidylate deaminase zinc-binding region
[Finegoldia magna BVS033A4]
gi|341592462|gb|EGS35348.1| cytidine and deoxycytidylate deaminase zinc-binding region
[Finegoldia magna SY403409CC001050417]
Length = 139
Score = 79.0 bits (193), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 48/111 (43%), Positives = 58/111 (52%), Gaps = 3/111 (2%)
Query: 91 WHEYFMASAFLVAKRSKDPVTRVGAVIVNEDNKIVGTGYNGMPIGCSD-DEFPWDKNTHD 149
W+EYFM A VA RS VG V+VN DN+IV TGYNG G DE
Sbjct: 5 WNEYFMDLALNVATRSTCDRAFVGCVLVNSDNRIVSTGYNGAISGNPHCDEVGHTLRDGH 64
Query: 150 ELDMCHAEMNAIL--NKNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIY 198
+ HAEMNA+L K K C Y + FPC C K +IQ+GI ++ Y
Sbjct: 65 CIATIHAEMNALLYCAKEGIAVKGCICYVTHFPCLNCTKSLIQAGISKIYY 115
Score = 36.2 bits (82), Expect = 7.7, Method: Compositional matrix adjust.
Identities = 18/43 (41%), Positives = 24/43 (55%), Gaps = 2/43 (4%)
Query: 1 MNAIL--NKNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIY 41
MNA+L K K C Y + FPC C K +IQ+GI ++ Y
Sbjct: 73 MNALLYCAKEGIAVKGCICYVTHFPCLNCTKSLIQAGISKIYY 115
>gi|297588118|ref|ZP_06946762.1| competence protein ComEB [Finegoldia magna ATCC 53516]
gi|297574807|gb|EFH93527.1| competence protein ComEB [Finegoldia magna ATCC 53516]
Length = 139
Score = 79.0 bits (193), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 48/111 (43%), Positives = 58/111 (52%), Gaps = 3/111 (2%)
Query: 91 WHEYFMASAFLVAKRSKDPVTRVGAVIVNEDNKIVGTGYNGMPIGCSD-DEFPWDKNTHD 149
W+EYFM A VA RS VG V+VN DN+IV TGYNG G DE
Sbjct: 5 WNEYFMDLALNVATRSTCDRAFVGCVLVNSDNRIVSTGYNGAISGNPHCDEVGHTLRDGH 64
Query: 150 ELDMCHAEMNAIL--NKNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIY 198
+ HAEMNA+L K K C Y + FPC C K +IQ+GI ++ Y
Sbjct: 65 CIATIHAEMNALLYCAKEGIAVKGCICYVTHFPCLNCTKSLIQAGISKIYY 115
Score = 36.2 bits (82), Expect = 8.1, Method: Compositional matrix adjust.
Identities = 18/43 (41%), Positives = 24/43 (55%), Gaps = 2/43 (4%)
Query: 1 MNAIL--NKNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIY 41
MNA+L K K C Y + FPC C K +IQ+GI ++ Y
Sbjct: 73 MNALLYCAKEGIAVKGCICYVTHFPCLNCTKSLIQAGISKIYY 115
>gi|91223974|ref|ZP_01259237.1| putative deoxycytidylate deaminase [Vibrio alginolyticus 12G01]
gi|254227760|ref|ZP_04921191.1| Deoxycytidylate deaminase [Vibrio sp. Ex25]
gi|262395803|ref|YP_003287656.1| deoxycytidylate deaminase [Vibrio sp. Ex25]
gi|451975434|ref|ZP_21926624.1| deoxycytidylate deaminase, putative [Vibrio alginolyticus E0666]
gi|91190885|gb|EAS77151.1| putative deoxycytidylate deaminase [Vibrio alginolyticus 12G01]
gi|151939802|gb|EDN58629.1| Deoxycytidylate deaminase [Vibrio sp. Ex25]
gi|262339397|gb|ACY53191.1| deoxycytidylate deaminase [Vibrio sp. Ex25]
gi|451930662|gb|EMD78366.1| deoxycytidylate deaminase, putative [Vibrio alginolyticus E0666]
Length = 154
Score = 79.0 bits (193), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 48/109 (44%), Positives = 61/109 (55%), Gaps = 3/109 (2%)
Query: 88 VLEWHEYFMASAFLVAKRSKDPVTRVGAVIVNEDNKIVGTGYNGMPIGCSDDEFPWDKNT 147
+ +W + F A LVA SKDP T+VGAVI + N+IV G+NG P G S D D+
Sbjct: 2 ISKWAKRFYQMAELVASWSKDPSTQVGAVITKQ-NRIVSVGFNGYPHGVS-DSVDTDERE 59
Query: 148 HDELDMCHAEMNAILNKNSADTKRCKLYTSLFPCNECAKVIIQSGIKEV 196
L HAE NAIL + D C ++ + FPC CA IIQ+GI V
Sbjct: 60 LKYLKTLHAEENAILF-SKRDLDGCDIWVTHFPCPNCAAKIIQTGISHV 107
>gi|375262700|ref|YP_005024930.1| deoxycytidylate deaminase [Vibrio sp. EJY3]
gi|369843128|gb|AEX23956.1| deoxycytidylate deaminase [Vibrio sp. EJY3]
Length = 154
Score = 79.0 bits (193), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 48/109 (44%), Positives = 61/109 (55%), Gaps = 3/109 (2%)
Query: 88 VLEWHEYFMASAFLVAKRSKDPVTRVGAVIVNEDNKIVGTGYNGMPIGCSDDEFPWDKNT 147
+ +W + F A LVA SKDP T+VGAVI + N+IV G+NG P G S D D+
Sbjct: 2 ISKWAKRFYQMAELVASWSKDPSTQVGAVITKQ-NRIVSVGFNGYPHGVS-DSVDTDERE 59
Query: 148 HDELDMCHAEMNAILNKNSADTKRCKLYTSLFPCNECAKVIIQSGIKEV 196
L HAE NAIL + D C ++ + FPC CA IIQ+GI V
Sbjct: 60 LKYLKTLHAEENAILF-SKRDLDGCDIWVTHFPCPNCAAKIIQTGISRV 107
>gi|260900445|ref|ZP_05908840.1| conserved hypothetical protein [Vibrio parahaemolyticus AQ4037]
gi|417322791|ref|ZP_12109325.1| putative deoxycytidylate deaminase [Vibrio parahaemolyticus 10329]
gi|433660261|ref|YP_007301120.1| dCMP deaminase [Vibrio parahaemolyticus BB22OP]
gi|308106996|gb|EFO44536.1| conserved hypothetical protein [Vibrio parahaemolyticus AQ4037]
gi|328470945|gb|EGF41856.1| putative deoxycytidylate deaminase [Vibrio parahaemolyticus 10329]
gi|432511648|gb|AGB12465.1| dCMP deaminase [Vibrio parahaemolyticus BB22OP]
Length = 154
Score = 79.0 bits (193), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 48/109 (44%), Positives = 61/109 (55%), Gaps = 3/109 (2%)
Query: 88 VLEWHEYFMASAFLVAKRSKDPVTRVGAVIVNEDNKIVGTGYNGMPIGCSDDEFPWDKNT 147
+ +W + F A LVA SKDP T+VGAVI + N+IV G+NG P G S D D+
Sbjct: 2 ISKWAKRFYQMAELVASWSKDPSTQVGAVITKQ-NRIVSVGFNGYPHGVS-DSVDTDERE 59
Query: 148 HDELDMCHAEMNAILNKNSADTKRCKLYTSLFPCNECAKVIIQSGIKEV 196
L HAE NAIL + D C ++ + FPC CA IIQ+GI V
Sbjct: 60 LKYLKTLHAEENAILF-SKRDLDGCDIWVTHFPCPNCAAKIIQTGISRV 107
>gi|194333660|ref|YP_002015520.1| CMP/dCMP deaminase [Prosthecochloris aestuarii DSM 271]
gi|194311478|gb|ACF45873.1| CMP/dCMP deaminase zinc-binding [Prosthecochloris aestuarii DSM
271]
Length = 174
Score = 79.0 bits (193), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 46/122 (37%), Positives = 66/122 (54%), Gaps = 13/122 (10%)
Query: 89 LEWHEYFMASAFLVAKRSKDPVTRVGAVIVNEDNKIVGTGYNGMPIG---CSDDEFPWDK 145
L WHEYFM+ A L+AKR+ +GAV+V DN I+ TGYNG P G C++ +
Sbjct: 26 LGWHEYFMSVAHLIAKRATCTRGHIGAVVV-RDNNILSTGYNGAPSGLPHCNETNCKIYR 84
Query: 146 NTHDE-------LDMCHAEMNAILN--KNSADTKRCKLYTSLFPCNECAKVIIQSGIKEV 196
+ H + ++ HAE+NAI K+ K +Y + PC C KV+I GI+ +
Sbjct: 85 SVHPDGTVEENCVNTIHAEINAIAQAAKHGVSIKDADIYITASPCIHCLKVLINVGIRTI 144
Query: 197 IY 198
Y
Sbjct: 145 YY 146
>gi|414160956|ref|ZP_11417219.1| ComE operon protein 2 [Staphylococcus simulans ACS-120-V-Sch1]
gi|410876635|gb|EKS24533.1| ComE operon protein 2 [Staphylococcus simulans ACS-120-V-Sch1]
Length = 153
Score = 79.0 bits (193), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 48/118 (40%), Positives = 65/118 (55%), Gaps = 8/118 (6%)
Query: 89 LEWHEYFMASAFLVAKRSKDPVTRVGAVIVNEDNKIVGTGYNGMPIG---CSDDEFPWDK 145
++W EYFMA + L++ RS VGA IV +DN+I+ GYNG G C D+ +
Sbjct: 4 IKWEEYFMAQSHLLSLRSTCTRLSVGATIV-KDNRIIAGGYNGSVAGEVHCIDEGCLMED 62
Query: 146 NTHDELDMCHAEMNAILN--KNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIYMCD 201
+ HAEMNAIL K T+ +Y + FPC C K IIQ+GIK++ Y D
Sbjct: 63 G--HCIRTIHAEMNAILQCAKQGVSTEGATIYVTHFPCLNCTKSIIQAGIKKIYYAKD 118
Score = 44.7 bits (104), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 29/74 (39%), Positives = 39/74 (52%), Gaps = 10/74 (13%)
Query: 1 MNAILN--KNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIYMCDKHKQ-------KPA 51
MNAIL K T+ +Y + FPC C K IIQ+GIK++ Y D H K +
Sbjct: 73 MNAILQCAKQGVSTEGATIYVTHFPCLNCTKSIIQAGIKKIYYAKDYHNHDYALKLLKQS 132
Query: 52 TIASKRM-FDAAKV 64
I K++ FDA +V
Sbjct: 133 GIEYKKIPFDADQV 146
>gi|422759813|ref|ZP_16813575.1| ComE operon protein 2 [Streptococcus dysgalactiae subsp.
dysgalactiae ATCC 27957]
gi|322412648|gb|EFY03556.1| ComE operon protein 2 [Streptococcus dysgalactiae subsp.
dysgalactiae ATCC 27957]
Length = 155
Score = 79.0 bits (193), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 47/116 (40%), Positives = 68/116 (58%), Gaps = 10/116 (8%)
Query: 89 LEWHEYFMASAFLVAKRSKDPVTRVGAVIVNEDNKIVGTGYNGMPIGCSDDEFPWDKNTH 148
L W +YFMA+A L++KRS VGAV+V +DN+I+ TGYNG G S + + +
Sbjct: 5 LSWQDYFMANAELISKRSTCDRAFVGAVLV-KDNRIIATGYNG---GVSATDNCNEAGHY 60
Query: 149 DELDMC----HAEMNAILN--KNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIY 198
E C HAEMNA++ K T ++Y + FPC C K ++Q+GIK++ Y
Sbjct: 61 MEDGHCIRTVHAEMNALIQCAKEGISTDGTEIYVTHFPCINCTKALLQAGIKKITY 116
Score = 37.7 bits (86), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 20/60 (33%), Positives = 32/60 (53%), Gaps = 5/60 (8%)
Query: 1 MNAILN--KNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIYMCDKHKQKPATIASKRM 58
MNA++ K T ++Y + FPC C K ++Q+GIK++ Y K +P A + M
Sbjct: 74 MNALIQCAKEGISTDGTEIYVTHFPCINCTKALLQAGIKKITY---KAHYRPHPFAIELM 130
>gi|15924579|ref|NP_372113.1| late competence operon required for DNA binding and uptake
[Staphylococcus aureus subsp. aureus Mu50]
gi|15927169|ref|NP_374702.1| late competence operon required for DNA binding and uptake comEB
[Staphylococcus aureus subsp. aureus N315]
gi|21283269|ref|NP_646357.1| late competence operon required for DNA binding and uptake comEB
[Staphylococcus aureus subsp. aureus MW2]
gi|49486423|ref|YP_043644.1| deaminase [Staphylococcus aureus subsp. aureus MSSA476]
gi|82751191|ref|YP_416932.1| late competence deaminase protein [Staphylococcus aureus RF122]
gi|151221703|ref|YP_001332525.1| competence protein ComEB required for DNA binding and uptake
[Staphylococcus aureus subsp. aureus str. Newman]
gi|156979907|ref|YP_001442166.1| late competence operon required for DNA binding and uptake
[Staphylococcus aureus subsp. aureus Mu3]
gi|255006374|ref|ZP_05144975.2| competence protein ComEB [Staphylococcus aureus subsp. aureus
Mu50-omega]
gi|257793665|ref|ZP_05642644.1| ComE operon protein 2 [Staphylococcus aureus A9781]
gi|258411036|ref|ZP_05681316.1| competence protein ComEB [Staphylococcus aureus A9763]
gi|258420161|ref|ZP_05683116.1| ComE operon protein 2 [Staphylococcus aureus A9719]
gi|258424016|ref|ZP_05686898.1| ComE operon protein 2 [Staphylococcus aureus A9635]
gi|258437420|ref|ZP_05689404.1| competence protein ComEB [Staphylococcus aureus A9299]
gi|258443626|ref|ZP_05691965.1| competence protein ComEB [Staphylococcus aureus A8115]
gi|258446834|ref|ZP_05694988.1| competence protein ComEB [Staphylococcus aureus A6300]
gi|258448748|ref|ZP_05696860.1| competence protein ComEB [Staphylococcus aureus A6224]
gi|258450583|ref|ZP_05698645.1| late competence operon required for DNA binding and uptake
[Staphylococcus aureus A5948]
gi|258453565|ref|ZP_05701543.1| late competence operon required for DNA binding and uptake
[Staphylococcus aureus A5937]
gi|262048588|ref|ZP_06021471.1| late competence operon required for DNA binding and uptake comEB
[Staphylococcus aureus D30]
gi|262051247|ref|ZP_06023471.1| late competence operon required for DNA binding and uptake comEB
[Staphylococcus aureus 930918-3]
gi|282893090|ref|ZP_06301324.1| ComE operon protein 2 [Staphylococcus aureus A8117]
gi|282916859|ref|ZP_06324617.1| ComE operon protein 2 [Staphylococcus aureus subsp. aureus D139]
gi|282920137|ref|ZP_06327862.1| ComE operon protein 2 [Staphylococcus aureus A9765]
gi|282928222|ref|ZP_06335827.1| ComE operon protein 2 [Staphylococcus aureus A10102]
gi|283770664|ref|ZP_06343556.1| dCMP deaminase [Staphylococcus aureus subsp. aureus H19]
gi|296276607|ref|ZP_06859114.1| competence protein ComEB [Staphylococcus aureus subsp. aureus MR1]
gi|379014797|ref|YP_005291033.1| competence protein ComEB [Staphylococcus aureus subsp. aureus VC40]
gi|379021370|ref|YP_005298032.1| dCMP deaminase, Late competence protein ComEB [Staphylococcus
aureus subsp. aureus M013]
gi|384547821|ref|YP_005737074.1| dCMP deaminase [Staphylococcus aureus subsp. aureus ED133]
gi|384862189|ref|YP_005744909.1| late competence operon required for DNA binding and uptake comEB
[Staphylococcus aureus subsp. aureus str. JKD6008]
gi|384864809|ref|YP_005750168.1| comE operon protein 2 [Staphylococcus aureus subsp. aureus ECT-R 2]
gi|384870129|ref|YP_005752843.1| competence protein ComEB [Staphylococcus aureus subsp. aureus
T0131]
gi|385781874|ref|YP_005758045.1| comE operon protein 2 [Staphylococcus aureus subsp. aureus
11819-97]
gi|386831198|ref|YP_006237852.1| putative deaminase [Staphylococcus aureus subsp. aureus HO 5096
0412]
gi|387143195|ref|YP_005731588.1| putative deaminase [Staphylococcus aureus subsp. aureus TW20]
gi|387150732|ref|YP_005742296.1| dCMP deaminase; Late competence protein ComEB [Staphylococcus
aureus 04-02981]
gi|387780680|ref|YP_005755478.1| putative deaminase [Staphylococcus aureus subsp. aureus LGA251]
gi|416842859|ref|ZP_11905186.1| late competence deaminase protein [Staphylococcus aureus O11]
gi|416846539|ref|ZP_11906588.1| late competence deaminase protein [Staphylococcus aureus O46]
gi|417649237|ref|ZP_12299041.1| ComE operon protein 2 [Staphylococcus aureus subsp. aureus 21189]
gi|417651387|ref|ZP_12301150.1| ComE operon protein 2 [Staphylococcus aureus subsp. aureus 21172]
gi|417653426|ref|ZP_12303157.1| ComE operon protein 2 [Staphylococcus aureus subsp. aureus 21193]
gi|417797460|ref|ZP_12444656.1| ComE operon protein 2 [Staphylococcus aureus subsp. aureus 21305]
gi|417798889|ref|ZP_12446043.1| ComE operon protein 2 [Staphylococcus aureus subsp. aureus 21310]
gi|417802932|ref|ZP_12449982.1| ComE operon protein 2 [Staphylococcus aureus subsp. aureus 21318]
gi|417890201|ref|ZP_12534280.1| ComE operon protein 2 [Staphylococcus aureus subsp. aureus 21200]
gi|417892907|ref|ZP_12536946.1| ComE operon protein 2 [Staphylococcus aureus subsp. aureus 21201]
gi|417897945|ref|ZP_12541871.1| ComE operon protein 2 [Staphylococcus aureus subsp. aureus 21259]
gi|417905327|ref|ZP_12549138.1| ComE operon protein 2 [Staphylococcus aureus subsp. aureus 21269]
gi|418276928|ref|ZP_12891682.1| ComE operon protein 2 [Staphylococcus aureus subsp. aureus 21178]
gi|418284138|ref|ZP_12896870.1| ComE operon protein 2 [Staphylococcus aureus subsp. aureus 21202]
gi|418285652|ref|ZP_12898320.1| ComE operon protein 2 [Staphylococcus aureus subsp. aureus 21209]
gi|418308958|ref|ZP_12920539.1| ComE operon protein 2 [Staphylococcus aureus subsp. aureus 21194]
gi|418313148|ref|ZP_12924642.1| ComE operon protein 2 [Staphylococcus aureus subsp. aureus 21334]
gi|418316468|ref|ZP_12927906.1| ComE operon protein 2 [Staphylococcus aureus subsp. aureus 21340]
gi|418318504|ref|ZP_12929906.1| ComE operon protein 2 [Staphylococcus aureus subsp. aureus 21232]
gi|418321244|ref|ZP_12932590.1| ComE operon protein 2 [Staphylococcus aureus subsp. aureus VCU006]
gi|418558927|ref|ZP_13123474.1| ComE operon protein 2 [Staphylococcus aureus subsp. aureus 21252]
gi|418562539|ref|ZP_13126996.1| ComE operon protein 2 [Staphylococcus aureus subsp. aureus 21262]
gi|418567129|ref|ZP_13131494.1| ComE operon protein 2 [Staphylococcus aureus subsp. aureus 21272]
gi|418571873|ref|ZP_13136093.1| ComE operon protein 2 [Staphylococcus aureus subsp. aureus 21283]
gi|418574495|ref|ZP_13138664.1| ComE operon protein 2 [Staphylococcus aureus subsp. aureus 21333]
gi|418579513|ref|ZP_13143608.1| comE operon protein 2 [Staphylococcus aureus subsp. aureus CIG1114]
gi|418600040|ref|ZP_13163514.1| ComE operon protein 2 [Staphylococcus aureus subsp. aureus 21343]
gi|418640436|ref|ZP_13202668.1| ComE operon protein 2 [Staphylococcus aureus subsp. aureus IS-3]
gi|418641731|ref|ZP_13203936.1| ComE operon protein 2 [Staphylococcus aureus subsp. aureus IS-24]
gi|418645189|ref|ZP_13207317.1| ComE operon protein 2 [Staphylococcus aureus subsp. aureus IS-55]
gi|418648454|ref|ZP_13210498.1| ComE operon protein 2 [Staphylococcus aureus subsp. aureus IS-88]
gi|418650448|ref|ZP_13212466.1| ComE operon protein 2 [Staphylococcus aureus subsp. aureus IS-91]
gi|418652896|ref|ZP_13214859.1| ComE operon protein 2 [Staphylococcus aureus subsp. aureus IS-99]
gi|418655348|ref|ZP_13217213.1| ComE operon protein 2 [Staphylococcus aureus subsp. aureus IS-105]
gi|418659195|ref|ZP_13220883.1| ComE operon protein 2 [Staphylococcus aureus subsp. aureus IS-111]
gi|418660789|ref|ZP_13222401.1| ComE operon protein 2 [Staphylococcus aureus subsp. aureus IS-122]
gi|418873260|ref|ZP_13427570.1| ComE operon protein 2 [Staphylococcus aureus subsp. aureus IS-125]
gi|418875528|ref|ZP_13429784.1| comE operon protein 2 [Staphylococcus aureus subsp. aureus CIGC93]
gi|418878506|ref|ZP_13432741.1| comE operon protein 2 [Staphylococcus aureus subsp. aureus CIG1165]
gi|418881272|ref|ZP_13435489.1| comE operon protein 2 [Staphylococcus aureus subsp. aureus CIG1213]
gi|418884121|ref|ZP_13438314.1| comE operon protein 2 [Staphylococcus aureus subsp. aureus CIG1769]
gi|418886853|ref|ZP_13441001.1| comE operon protein 2 [Staphylococcus aureus subsp. aureus CIG1150]
gi|418889404|ref|ZP_13443537.1| comE operon protein 2 [Staphylococcus aureus subsp. aureus CIG1524]
gi|418895351|ref|ZP_13449446.1| comE operon protein 2 [Staphylococcus aureus subsp. aureus CIG1057]
gi|418903895|ref|ZP_13457936.1| comE operon protein 2 [Staphylococcus aureus subsp. aureus CIG1770]
gi|418906533|ref|ZP_13460559.1| comE operon protein 2 [Staphylococcus aureus subsp. aureus
CIGC345D]
gi|418912199|ref|ZP_13466180.1| comE operon protein 2 [Staphylococcus aureus subsp. aureus CIG547]
gi|418914690|ref|ZP_13468661.1| comE operon protein 2 [Staphylococcus aureus subsp. aureus
CIGC340D]
gi|418920669|ref|ZP_13474601.1| comE operon protein 2 [Staphylococcus aureus subsp. aureus CIGC348]
gi|418925848|ref|ZP_13479750.1| comE operon protein 2 [Staphylococcus aureus subsp. aureus CIG2018]
gi|418928938|ref|ZP_13482824.1| comE operon protein 2 [Staphylococcus aureus subsp. aureus CIG1612]
gi|418931893|ref|ZP_13485728.1| comE operon protein 2 [Staphylococcus aureus subsp. aureus CIG1750]
gi|418934559|ref|ZP_13488381.1| comE operon protein 2 [Staphylococcus aureus subsp. aureus CIGC128]
gi|418946523|ref|ZP_13498946.1| ComE operon protein 2 [Staphylococcus aureus subsp. aureus IS-157]
gi|418950099|ref|ZP_13502304.1| ComE operon protein 2 [Staphylococcus aureus subsp. aureus IS-160]
gi|418955682|ref|ZP_13507619.1| ComE operon protein 2 [Staphylococcus aureus subsp. aureus IS-189]
gi|418988655|ref|ZP_13536327.1| comE operon protein 2 [Staphylococcus aureus subsp. aureus CIG1835]
gi|418994314|ref|ZP_13541949.1| comE operon protein 2 [Staphylococcus aureus subsp. aureus CIG290]
gi|419773146|ref|ZP_14299157.1| ComE operon protein 2 [Staphylococcus aureus subsp. aureus CO-23]
gi|419784593|ref|ZP_14310356.1| ComE operon protein 2 [Staphylococcus aureus subsp. aureus IS-M]
gi|421148531|ref|ZP_15608191.1| late competence deaminase protein [Staphylococcus aureus subsp.
aureus str. Newbould 305]
gi|424785424|ref|ZP_18212227.1| dCMP deaminase [Staphylococcus aureus CN79]
gi|440707243|ref|ZP_20887942.1| ComE operon protein 2 [Staphylococcus aureus subsp. aureus 21282]
gi|440735039|ref|ZP_20914650.1| ComE operon protein ComEB [Staphylococcus aureus subsp. aureus DSM
20231]
gi|443637573|ref|ZP_21121648.1| ComE operon protein 2 [Staphylococcus aureus subsp. aureus 21236]
gi|443639894|ref|ZP_21123894.1| ComE operon protein 2 [Staphylococcus aureus subsp. aureus 21196]
gi|13701387|dbj|BAB42681.1| late competence operon required for DNA binding and uptake comEB
[Staphylococcus aureus subsp. aureus N315]
gi|14247360|dbj|BAB57751.1| late competence operon required for DNA binding and uptake
[Staphylococcus aureus subsp. aureus Mu50]
gi|21204709|dbj|BAB95405.1| late competence operon required for DNA binding and uptake comEB
[Staphylococcus aureus subsp. aureus MW2]
gi|49244866|emb|CAG43327.1| putative deaminase [Staphylococcus aureus subsp. aureus MSSA476]
gi|82656722|emb|CAI81150.1| late competence deaminase protein [Staphylococcus aureus RF122]
gi|150374503|dbj|BAF67763.1| competence protein ComEB required for DNA binding and uptake
[Staphylococcus aureus subsp. aureus str. Newman]
gi|156722042|dbj|BAF78459.1| late competence operon required for DNA binding and uptake
[Staphylococcus aureus subsp. aureus Mu3]
gi|257787637|gb|EEV25977.1| ComE operon protein 2 [Staphylococcus aureus A9781]
gi|257840186|gb|EEV64650.1| competence protein ComEB [Staphylococcus aureus A9763]
gi|257843872|gb|EEV68266.1| ComE operon protein 2 [Staphylococcus aureus A9719]
gi|257845637|gb|EEV69669.1| ComE operon protein 2 [Staphylococcus aureus A9635]
gi|257848625|gb|EEV72613.1| competence protein ComEB [Staphylococcus aureus A9299]
gi|257851032|gb|EEV74975.1| competence protein ComEB [Staphylococcus aureus A8115]
gi|257854409|gb|EEV77358.1| competence protein ComEB [Staphylococcus aureus A6300]
gi|257858026|gb|EEV80915.1| competence protein ComEB [Staphylococcus aureus A6224]
gi|257861741|gb|EEV84540.1| late competence operon required for DNA binding and uptake
[Staphylococcus aureus A5948]
gi|257864296|gb|EEV87046.1| late competence operon required for DNA binding and uptake
[Staphylococcus aureus A5937]
gi|259160884|gb|EEW45904.1| late competence operon required for DNA binding and uptake comEB
[Staphylococcus aureus 930918-3]
gi|259163235|gb|EEW47794.1| late competence operon required for DNA binding and uptake comEB
[Staphylococcus aureus D30]
gi|269941078|emb|CBI49462.1| putative deaminase [Staphylococcus aureus subsp. aureus TW20]
gi|282319346|gb|EFB49698.1| ComE operon protein 2 [Staphylococcus aureus subsp. aureus D139]
gi|282590029|gb|EFB95111.1| ComE operon protein 2 [Staphylococcus aureus A10102]
gi|282594485|gb|EFB99470.1| ComE operon protein 2 [Staphylococcus aureus A9765]
gi|282764408|gb|EFC04534.1| ComE operon protein 2 [Staphylococcus aureus A8117]
gi|283460811|gb|EFC07901.1| dCMP deaminase [Staphylococcus aureus subsp. aureus H19]
gi|285817271|gb|ADC37758.1| dCMP deaminase; Late competence protein ComEB [Staphylococcus
aureus 04-02981]
gi|298694870|gb|ADI98092.1| dCMP deaminase [Staphylococcus aureus subsp. aureus ED133]
gi|302751418|gb|ADL65595.1| late competence operon required for DNA binding and uptake comEB
[Staphylococcus aureus subsp. aureus str. JKD6008]
gi|312829976|emb|CBX34818.1| comE operon protein 2 [Staphylococcus aureus subsp. aureus ECT-R 2]
gi|323438554|gb|EGA96301.1| late competence deaminase protein [Staphylococcus aureus O11]
gi|323442793|gb|EGB00418.1| late competence deaminase protein [Staphylococcus aureus O46]
gi|329314264|gb|AEB88677.1| Possible competence protein ComEB [Staphylococcus aureus subsp.
aureus T0131]
gi|329727571|gb|EGG64027.1| ComE operon protein 2 [Staphylococcus aureus subsp. aureus 21172]
gi|329728343|gb|EGG64780.1| ComE operon protein 2 [Staphylococcus aureus subsp. aureus 21189]
gi|329733117|gb|EGG69454.1| ComE operon protein 2 [Staphylococcus aureus subsp. aureus 21193]
gi|334266952|gb|EGL85422.1| ComE operon protein 2 [Staphylococcus aureus subsp. aureus 21305]
gi|334273580|gb|EGL91923.1| ComE operon protein 2 [Staphylococcus aureus subsp. aureus 21318]
gi|334275051|gb|EGL93352.1| ComE operon protein 2 [Staphylococcus aureus subsp. aureus 21310]
gi|341843603|gb|EGS84825.1| ComE operon protein 2 [Staphylococcus aureus subsp. aureus 21269]
gi|341849447|gb|EGS90590.1| ComE operon protein 2 [Staphylococcus aureus subsp. aureus 21259]
gi|341855894|gb|EGS96738.1| ComE operon protein 2 [Staphylococcus aureus subsp. aureus 21200]
gi|341856682|gb|EGS97514.1| ComE operon protein 2 [Staphylococcus aureus subsp. aureus 21201]
gi|344177782|emb|CCC88261.1| putative deaminase [Staphylococcus aureus subsp. aureus LGA251]
gi|359830679|gb|AEV78657.1| dCMP deaminase, Late competence protein ComEB [Staphylococcus
aureus subsp. aureus M013]
gi|364522863|gb|AEW65613.1| comE operon protein 2 [Staphylococcus aureus subsp. aureus
11819-97]
gi|365165002|gb|EHM56832.1| ComE operon protein 2 [Staphylococcus aureus subsp. aureus 21202]
gi|365169462|gb|EHM60710.1| ComE operon protein 2 [Staphylococcus aureus subsp. aureus 21209]
gi|365173911|gb|EHM64340.1| ComE operon protein 2 [Staphylococcus aureus subsp. aureus 21178]
gi|365225476|gb|EHM66719.1| ComE operon protein 2 [Staphylococcus aureus subsp. aureus VCU006]
gi|365236107|gb|EHM77009.1| ComE operon protein 2 [Staphylococcus aureus subsp. aureus 21194]
gi|365236419|gb|EHM77308.1| ComE operon protein 2 [Staphylococcus aureus subsp. aureus 21334]
gi|365241152|gb|EHM81907.1| ComE operon protein 2 [Staphylococcus aureus subsp. aureus 21340]
gi|365242967|gb|EHM83662.1| ComE operon protein 2 [Staphylococcus aureus subsp. aureus 21232]
gi|371973643|gb|EHO90991.1| ComE operon protein 2 [Staphylococcus aureus subsp. aureus 21262]
gi|371976277|gb|EHO93567.1| ComE operon protein 2 [Staphylococcus aureus subsp. aureus 21252]
gi|371978365|gb|EHO95614.1| ComE operon protein 2 [Staphylococcus aureus subsp. aureus 21283]
gi|371979222|gb|EHO96457.1| ComE operon protein 2 [Staphylococcus aureus subsp. aureus 21333]
gi|371982833|gb|EHO99981.1| ComE operon protein 2 [Staphylococcus aureus subsp. aureus 21272]
gi|374363494|gb|AEZ37599.1| competence protein ComEB [Staphylococcus aureus subsp. aureus VC40]
gi|374395629|gb|EHQ66892.1| ComE operon protein 2 [Staphylococcus aureus subsp. aureus 21343]
gi|375015000|gb|EHS08671.1| ComE operon protein 2 [Staphylococcus aureus subsp. aureus IS-3]
gi|375018186|gb|EHS11766.1| ComE operon protein 2 [Staphylococcus aureus subsp. aureus IS-24]
gi|375021064|gb|EHS14571.1| ComE operon protein 2 [Staphylococcus aureus subsp. aureus IS-99]
gi|375024022|gb|EHS17467.1| ComE operon protein 2 [Staphylococcus aureus subsp. aureus IS-55]
gi|375026367|gb|EHS19750.1| ComE operon protein 2 [Staphylococcus aureus subsp. aureus IS-88]
gi|375027734|gb|EHS21092.1| ComE operon protein 2 [Staphylococcus aureus subsp. aureus IS-91]
gi|375036193|gb|EHS29271.1| ComE operon protein 2 [Staphylococcus aureus subsp. aureus IS-111]
gi|375037381|gb|EHS30419.1| ComE operon protein 2 [Staphylococcus aureus subsp. aureus IS-105]
gi|375040029|gb|EHS32935.1| ComE operon protein 2 [Staphylococcus aureus subsp. aureus IS-122]
gi|375366451|gb|EHS70448.1| ComE operon protein 2 [Staphylococcus aureus subsp. aureus IS-125]
gi|375370768|gb|EHS74566.1| ComE operon protein 2 [Staphylococcus aureus subsp. aureus IS-189]
gi|375377773|gb|EHS81218.1| ComE operon protein 2 [Staphylococcus aureus subsp. aureus IS-160]
gi|375377868|gb|EHS81305.1| ComE operon protein 2 [Staphylococcus aureus subsp. aureus IS-157]
gi|377694628|gb|EHT18993.1| comE operon protein 2 [Staphylococcus aureus subsp. aureus CIG1165]
gi|377695157|gb|EHT19521.1| comE operon protein 2 [Staphylococcus aureus subsp. aureus CIG1057]
gi|377697540|gb|EHT21895.1| comE operon protein 2 [Staphylococcus aureus subsp. aureus CIG1114]
gi|377713071|gb|EHT37284.1| comE operon protein 2 [Staphylococcus aureus subsp. aureus CIG1750]
gi|377714456|gb|EHT38657.1| comE operon protein 2 [Staphylococcus aureus subsp. aureus CIG1769]
gi|377717748|gb|EHT41923.1| comE operon protein 2 [Staphylococcus aureus subsp. aureus CIG1835]
gi|377722456|gb|EHT46582.1| comE operon protein 2 [Staphylococcus aureus subsp. aureus CIG547]
gi|377725806|gb|EHT49919.1| comE operon protein 2 [Staphylococcus aureus subsp. aureus CIG1150]
gi|377731015|gb|EHT55073.1| comE operon protein 2 [Staphylococcus aureus subsp. aureus CIG1213]
gi|377738850|gb|EHT62859.1| comE operon protein 2 [Staphylococcus aureus subsp. aureus CIG1612]
gi|377742910|gb|EHT66895.1| comE operon protein 2 [Staphylococcus aureus subsp. aureus CIG1770]
gi|377744111|gb|EHT68089.1| comE operon protein 2 [Staphylococcus aureus subsp. aureus CIG290]
gi|377744917|gb|EHT68894.1| comE operon protein 2 [Staphylococcus aureus subsp. aureus CIG2018]
gi|377752912|gb|EHT76830.1| comE operon protein 2 [Staphylococcus aureus subsp. aureus CIG1524]
gi|377757016|gb|EHT80912.1| comE operon protein 2 [Staphylococcus aureus subsp. aureus
CIGC340D]
gi|377763438|gb|EHT87294.1| comE operon protein 2 [Staphylococcus aureus subsp. aureus
CIGC345D]
gi|377764395|gb|EHT88248.1| comE operon protein 2 [Staphylococcus aureus subsp. aureus CIGC348]
gi|377769600|gb|EHT93368.1| comE operon protein 2 [Staphylococcus aureus subsp. aureus CIGC93]
gi|377770653|gb|EHT94414.1| comE operon protein 2 [Staphylococcus aureus subsp. aureus CIGC128]
gi|383363803|gb|EID41129.1| ComE operon protein 2 [Staphylococcus aureus subsp. aureus IS-M]
gi|383972970|gb|EID88991.1| ComE operon protein 2 [Staphylococcus aureus subsp. aureus CO-23]
gi|385196590|emb|CCG16219.1| putative deaminase [Staphylococcus aureus subsp. aureus HO 5096
0412]
gi|394331674|gb|EJE57757.1| late competence deaminase protein [Staphylococcus aureus subsp.
aureus str. Newbould 305]
gi|421956834|gb|EKU09163.1| dCMP deaminase [Staphylococcus aureus CN79]
gi|436431134|gb|ELP28488.1| ComE operon protein ComEB [Staphylococcus aureus subsp. aureus DSM
20231]
gi|436505999|gb|ELP41838.1| ComE operon protein 2 [Staphylococcus aureus subsp. aureus 21282]
gi|443405356|gb|ELS63960.1| ComE operon protein 2 [Staphylococcus aureus subsp. aureus 21236]
gi|443406169|gb|ELS64753.1| ComE operon protein 2 [Staphylococcus aureus subsp. aureus 21196]
Length = 153
Score = 79.0 bits (193), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 49/117 (41%), Positives = 65/117 (55%), Gaps = 6/117 (5%)
Query: 89 LEWHEYFMASAFLVAKRSKDPVTRVGAVIVNEDNKIVGTGYNGMPIGCSD--DEFPWDKN 146
++W EYFMA + L+A RS VGA IV +DN+I+ GYNG G DE ++
Sbjct: 4 IKWEEYFMAQSHLLALRSTCQRLSVGATIV-KDNRIIAGGYNGSVAGEVHCIDEGCLIED 62
Query: 147 THDELDMCHAEMNAILN--KNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIYMCD 201
H + HAEMNA+L K T+ +Y + FPC C K IIQ+GIK + Y D
Sbjct: 63 GHC-IRTIHAEMNALLQCAKQGVSTEGATIYVTHFPCLNCTKSIIQAGIKRIYYAED 118
Score = 45.4 bits (106), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 23/54 (42%), Positives = 30/54 (55%), Gaps = 2/54 (3%)
Query: 1 MNAILN--KNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIYMCDKHKQKPAT 52
MNA+L K T+ +Y + FPC C K IIQ+GIK + Y D H + AT
Sbjct: 73 MNALLQCAKQGVSTEGATIYVTHFPCLNCTKSIIQAGIKRIYYAEDYHNHEYAT 126
>gi|71904197|ref|YP_281000.1| ComE operon protein 2 [Streptococcus pyogenes MGAS6180]
gi|251783268|ref|YP_002997573.1| ComE operon protein 2 [Streptococcus dysgalactiae subsp.
equisimilis GGS_124]
gi|386317705|ref|YP_006013869.1| ComE operon protein 2 [Streptococcus dysgalactiae subsp.
equisimilis ATCC 12394]
gi|408402344|ref|YP_006860308.1| comE operon protein 2 [Streptococcus dysgalactiae subsp.
equisimilis RE378]
gi|410495651|ref|YP_006905497.1| ComE operon protein 2 [Streptococcus dysgalactiae subsp.
equisimilis AC-2713]
gi|417753625|ref|ZP_12401732.1| putative ComE operon protein 2 [Streptococcus dysgalactiae subsp.
equisimilis SK1249]
gi|417928769|ref|ZP_12572157.1| putative ComE operon protein 2 [Streptococcus dysgalactiae subsp.
equisimilis SK1250]
gi|71803292|gb|AAX72645.1| ComE operon protein 2 [Streptococcus pyogenes MGAS6180]
gi|242391900|dbj|BAH82359.1| ComE operon protein 2 [Streptococcus dysgalactiae subsp.
equisimilis GGS_124]
gi|323127992|gb|ADX25289.1| ComE operon protein 2 [Streptococcus dysgalactiae subsp.
equisimilis ATCC 12394]
gi|333769354|gb|EGL46482.1| putative ComE operon protein 2 [Streptococcus dysgalactiae subsp.
equisimilis SK1249]
gi|340766643|gb|EGR89169.1| putative ComE operon protein 2 [Streptococcus dysgalactiae subsp.
equisimilis SK1250]
gi|407968573|dbj|BAM61811.1| comE operon protein 2 [Streptococcus dysgalactiae subsp.
equisimilis RE378]
gi|410440811|emb|CCI63439.1| ComE operon protein 2 [Streptococcus dysgalactiae subsp.
equisimilis AC-2713]
Length = 155
Score = 78.6 bits (192), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 47/116 (40%), Positives = 68/116 (58%), Gaps = 10/116 (8%)
Query: 89 LEWHEYFMASAFLVAKRSKDPVTRVGAVIVNEDNKIVGTGYNGMPIGCSDDEFPWDKNTH 148
L W +YFMA+A L++KRS VGAV+V +DN+I+ TGYNG G S + + +
Sbjct: 5 LSWQDYFMANAELISKRSTCDRAFVGAVLV-KDNRIIATGYNG---GVSATDNCNEAGHY 60
Query: 149 DELDMC----HAEMNAILN--KNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIY 198
E C HAEMNA++ K T ++Y + FPC C K ++Q+GIK++ Y
Sbjct: 61 MEDGHCIRTVHAEMNALIQCAKEGISTDGTEIYVTHFPCINCTKALLQAGIKKITY 116
Score = 37.7 bits (86), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 20/60 (33%), Positives = 32/60 (53%), Gaps = 5/60 (8%)
Query: 1 MNAILN--KNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIYMCDKHKQKPATIASKRM 58
MNA++ K T ++Y + FPC C K ++Q+GIK++ Y K +P A + M
Sbjct: 74 MNALIQCAKEGISTDGTEIYVTHFPCINCTKALLQAGIKKITY---KAHYRPHPFAIELM 130
>gi|153837138|ref|ZP_01989805.1| deoxycytidylate deaminase [Vibrio parahaemolyticus AQ3810]
gi|149749555|gb|EDM60301.1| deoxycytidylate deaminase [Vibrio parahaemolyticus AQ3810]
Length = 154
Score = 78.6 bits (192), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 48/109 (44%), Positives = 61/109 (55%), Gaps = 3/109 (2%)
Query: 88 VLEWHEYFMASAFLVAKRSKDPVTRVGAVIVNEDNKIVGTGYNGMPIGCSDDEFPWDKNT 147
+ +W + F A LVA SKDP T+VGAVI + N+IV G+NG P G S D D+
Sbjct: 2 ISKWAKRFYQMAELVASWSKDPSTQVGAVITKQ-NRIVSVGFNGYPHGVS-DSVDTDERE 59
Query: 148 HDELDMCHAEMNAILNKNSADTKRCKLYTSLFPCNECAKVIIQSGIKEV 196
L HAE NAIL + D C ++ + FPC CA IIQ+GI V
Sbjct: 60 LKYLKTLHAEENAILF-SKRDLDGCDIWVTHFPCPNCAAKIIQTGISHV 107
>gi|227486316|ref|ZP_03916632.1| competence protein ComEB [Anaerococcus lactolyticus ATCC 51172]
gi|227235727|gb|EEI85742.1| competence protein ComEB [Anaerococcus lactolyticus ATCC 51172]
Length = 147
Score = 78.6 bits (192), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 48/115 (41%), Positives = 59/115 (51%), Gaps = 3/115 (2%)
Query: 87 DVLEWHEYFMASAFLVAKRSKDPVTRVGAVIVNEDNKIVGTGYNGMPIGCSD-DEFPWDK 145
D L W EYFM A VA R VG V+VN +N+IV TGYNG G + DE
Sbjct: 4 DRLTWDEYFMRLAETVAMRGTCDRAYVGCVLVNSENRIVSTGYNGSIKGNAHCDEIGHTM 63
Query: 146 NTHDELDMCHAEMNAIL--NKNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIY 198
+ HAEMNA+L K C Y + FPC C K +IQ+GIK++ Y
Sbjct: 64 RDGHCIATIHAEMNALLYCAKEGIAVNNCICYVTHFPCLNCTKSLIQAGIKKIYY 118
Score = 36.6 bits (83), Expect = 6.7, Method: Compositional matrix adjust.
Identities = 18/43 (41%), Positives = 24/43 (55%), Gaps = 2/43 (4%)
Query: 1 MNAIL--NKNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIY 41
MNA+L K C Y + FPC C K +IQ+GIK++ Y
Sbjct: 76 MNALLYCAKEGIAVNNCICYVTHFPCLNCTKSLIQAGIKKIYY 118
>gi|392972257|ref|ZP_10337649.1| competence protein ComEB [Staphylococcus equorum subsp. equorum
Mu2]
gi|403046418|ref|ZP_10901887.1| dCMP deaminase [Staphylococcus sp. OJ82]
gi|392509970|emb|CCI60952.1| competence protein ComEB [Staphylococcus equorum subsp. equorum
Mu2]
gi|402763114|gb|EJX17207.1| dCMP deaminase [Staphylococcus sp. OJ82]
Length = 153
Score = 78.6 bits (192), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 48/120 (40%), Positives = 65/120 (54%), Gaps = 8/120 (6%)
Query: 87 DVLEWHEYFMASAFLVAKRSKDPVTRVGAVIVNEDNKIVGTGYNGMPIG---CSDDEFPW 143
D ++W EYFMA + L+A RS VGA IV +DN+I+ GYNG G C D++
Sbjct: 2 DRIKWEEYFMAQSHLLALRSTCQRLSVGATIV-KDNRIIAGGYNGSVSGEVHCIDEDCLL 60
Query: 144 DKNTHDELDMCHAEMNAILN--KNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIYMCD 201
+ + HAEMNA+L K T +Y + FPC C K IIQ+GI+ + Y D
Sbjct: 61 EDG--HCIRTIHAEMNALLQCAKQGVSTDGATIYVTHFPCLNCTKSIIQAGIQTIYYAED 118
Score = 42.0 bits (97), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 33/68 (48%), Gaps = 6/68 (8%)
Query: 1 MNAILN--KNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIYMCDKHKQKPATIASKRM 58
MNA+L K T +Y + FPC C K IIQ+GI+ + Y D H A ++
Sbjct: 73 MNALLQCAKQGVSTDGATIYVTHFPCLNCTKSIIQAGIQTIYYAEDYHNHSYAL----KL 128
Query: 59 FDAAKVHY 66
D + + Y
Sbjct: 129 LDQSGIDY 136
>gi|169825268|ref|YP_001692879.1| putative late competence protein required for DNA binding
[Finegoldia magna ATCC 29328]
gi|167832073|dbj|BAG08989.1| putative late competence protein required for DNA binding
[Finegoldia magna ATCC 29328]
Length = 139
Score = 78.6 bits (192), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 48/111 (43%), Positives = 58/111 (52%), Gaps = 3/111 (2%)
Query: 91 WHEYFMASAFLVAKRSKDPVTRVGAVIVNEDNKIVGTGYNGMPIGCSD-DEFPWDKNTHD 149
W+EYFM A VA RS VG V+VN DN+IV TGYNG G DE
Sbjct: 5 WNEYFMDLALNVATRSTCDRAFVGCVLVNSDNRIVSTGYNGAISGNPHCDEVGHTLRDGH 64
Query: 150 ELDMCHAEMNAIL--NKNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIY 198
+ HAEMNA+L K K C Y + FPC C K +IQ+GI ++ Y
Sbjct: 65 CIATIHAEMNALLYCAKEGIAVKGCICYVTHFPCLNCTKSLIQAGISKIYY 115
Score = 36.2 bits (82), Expect = 7.7, Method: Compositional matrix adjust.
Identities = 18/43 (41%), Positives = 24/43 (55%), Gaps = 2/43 (4%)
Query: 1 MNAIL--NKNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIY 41
MNA+L K K C Y + FPC C K +IQ+GI ++ Y
Sbjct: 73 MNALLYCAKEGIAVKGCICYVTHFPCLNCTKSLIQAGISKIYY 115
>gi|251811005|ref|ZP_04825478.1| competence protein ComEB [Staphylococcus epidermidis BCM-HMP0060]
gi|417656010|ref|ZP_12305701.1| ComE operon protein 2 [Staphylococcus epidermidis VCU028]
gi|417913695|ref|ZP_12557358.1| ComE operon protein 2 [Staphylococcus epidermidis VCU109]
gi|418325668|ref|ZP_12936874.1| ComE operon protein 2 [Staphylococcus epidermidis VCU071]
gi|418412000|ref|ZP_12985266.1| ComE operon protein 2 [Staphylococcus epidermidis BVS058A4]
gi|418609440|ref|ZP_13172592.1| ComE operon protein 2 [Staphylococcus epidermidis VCU065]
gi|418625288|ref|ZP_13187941.1| ComE operon protein 2 [Staphylococcus epidermidis VCU125]
gi|418629406|ref|ZP_13191914.1| ComE operon protein 2 [Staphylococcus epidermidis VCU127]
gi|418665227|ref|ZP_13226677.1| ComE operon protein 2 [Staphylococcus epidermidis VCU081]
gi|420163042|ref|ZP_14669789.1| ComE operon protein 2 [Staphylococcus epidermidis NIHLM095]
gi|420165578|ref|ZP_14672269.1| ComE operon protein 2 [Staphylococcus epidermidis NIHLM088]
gi|420167985|ref|ZP_14674637.1| ComE operon protein 2 [Staphylococcus epidermidis NIHLM087]
gi|420184561|ref|ZP_14690670.1| ComE operon protein 2 [Staphylococcus epidermidis NIHLM040]
gi|420202372|ref|ZP_14707965.1| ComE operon protein 2 [Staphylococcus epidermidis NIHLM018]
gi|420206093|ref|ZP_14711603.1| ComE operon protein 2 [Staphylococcus epidermidis NIHLM008]
gi|421606917|ref|ZP_16048168.1| competence protein ComE [Staphylococcus epidermidis AU12-03]
gi|251805515|gb|EES58172.1| competence protein ComEB [Staphylococcus epidermidis BCM-HMP0060]
gi|329737260|gb|EGG73514.1| ComE operon protein 2 [Staphylococcus epidermidis VCU028]
gi|341654717|gb|EGS78455.1| ComE operon protein 2 [Staphylococcus epidermidis VCU109]
gi|365228270|gb|EHM69455.1| ComE operon protein 2 [Staphylococcus epidermidis VCU071]
gi|374407654|gb|EHQ78506.1| ComE operon protein 2 [Staphylococcus epidermidis VCU065]
gi|374409202|gb|EHQ80002.1| ComE operon protein 2 [Staphylococcus epidermidis VCU081]
gi|374825430|gb|EHR89366.1| ComE operon protein 2 [Staphylococcus epidermidis VCU125]
gi|374834109|gb|EHR97769.1| ComE operon protein 2 [Staphylococcus epidermidis VCU127]
gi|394234731|gb|EJD80305.1| ComE operon protein 2 [Staphylococcus epidermidis NIHLM095]
gi|394235379|gb|EJD80951.1| ComE operon protein 2 [Staphylococcus epidermidis NIHLM088]
gi|394238013|gb|EJD83499.1| ComE operon protein 2 [Staphylococcus epidermidis NIHLM087]
gi|394257212|gb|EJE02134.1| ComE operon protein 2 [Staphylococcus epidermidis NIHLM040]
gi|394269780|gb|EJE14310.1| ComE operon protein 2 [Staphylococcus epidermidis NIHLM018]
gi|394277932|gb|EJE22249.1| ComE operon protein 2 [Staphylococcus epidermidis NIHLM008]
gi|406657386|gb|EKC83774.1| competence protein ComE [Staphylococcus epidermidis AU12-03]
gi|410891583|gb|EKS39380.1| ComE operon protein 2 [Staphylococcus epidermidis BVS058A4]
Length = 153
Score = 78.6 bits (192), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 49/117 (41%), Positives = 65/117 (55%), Gaps = 6/117 (5%)
Query: 89 LEWHEYFMASAFLVAKRSKDPVTRVGAVIVNEDNKIVGTGYNGMPIGCSD--DEFPWDKN 146
++W EYFMA + L+A RS VGA IV +DN+I+ GYNG G DE ++
Sbjct: 4 IKWEEYFMAQSHLLALRSTCKRLSVGATIV-KDNRIIAGGYNGSVAGEVHCIDEGCLIED 62
Query: 147 THDELDMCHAEMNAILN--KNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIYMCD 201
H + HAEMNA+L K T+ +Y + FPC C K IIQ+GIK + Y D
Sbjct: 63 GHC-IRTIHAEMNALLQCAKQGVSTEGATIYVTHFPCLNCTKSIIQAGIKTIYYAQD 118
Score = 42.7 bits (99), Expect = 0.081, Method: Compositional matrix adjust.
Identities = 22/53 (41%), Positives = 28/53 (52%), Gaps = 2/53 (3%)
Query: 1 MNAILN--KNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIYMCDKHKQKPA 51
MNA+L K T+ +Y + FPC C K IIQ+GIK + Y D H A
Sbjct: 73 MNALLQCAKQGVSTEGATIYVTHFPCLNCTKSIIQAGIKTIYYAQDYHNHDYA 125
>gi|161509817|ref|YP_001575476.1| competence protein ComEB [Staphylococcus aureus subsp. aureus
USA300_TCH1516]
gi|253732242|ref|ZP_04866407.1| competence protein ComEB [Staphylococcus aureus subsp. aureus
USA300_TCH959]
gi|253733160|ref|ZP_04867325.1| competence protein ComEB [Staphylococcus aureus subsp. aureus
TCH130]
gi|294848619|ref|ZP_06789365.1| ComE operon protein 2 [Staphylococcus aureus A9754]
gi|295406712|ref|ZP_06816517.1| ComE operon protein 2 [Staphylococcus aureus A8819]
gi|297207692|ref|ZP_06924127.1| competence protein ComEB [Staphylococcus aureus subsp. aureus ATCC
51811]
gi|297245706|ref|ZP_06929571.1| ComE operon protein 2 [Staphylococcus aureus A8796]
gi|300911773|ref|ZP_07129216.1| competence protein ComEB [Staphylococcus aureus subsp. aureus
TCH70]
gi|304380821|ref|ZP_07363481.1| ComE operon protein ComEB [Staphylococcus aureus subsp. aureus ATCC
BAA-39]
gi|422742627|ref|ZP_16796630.1| ComE operon protein 2 [Staphylococcus aureus subsp. aureus MRSA177]
gi|422746117|ref|ZP_16800050.1| ComE operon protein 2 [Staphylococcus aureus subsp. aureus MRSA131]
gi|424768950|ref|ZP_18196187.1| ComE operon protein 2 [Staphylococcus aureus subsp. aureus CM05]
gi|160368626|gb|ABX29597.1| possible competence protein ComEB [Staphylococcus aureus subsp.
aureus USA300_TCH1516]
gi|253724031|gb|EES92760.1| competence protein ComEB [Staphylococcus aureus subsp. aureus
USA300_TCH959]
gi|253728916|gb|EES97645.1| competence protein ComEB [Staphylococcus aureus subsp. aureus
TCH130]
gi|294824645|gb|EFG41068.1| ComE operon protein 2 [Staphylococcus aureus A9754]
gi|294968459|gb|EFG44483.1| ComE operon protein 2 [Staphylococcus aureus A8819]
gi|296887709|gb|EFH26607.1| competence protein ComEB [Staphylococcus aureus subsp. aureus ATCC
51811]
gi|297177357|gb|EFH36609.1| ComE operon protein 2 [Staphylococcus aureus A8796]
gi|300886019|gb|EFK81221.1| competence protein ComEB [Staphylococcus aureus subsp. aureus
TCH70]
gi|304340548|gb|EFM06482.1| ComE operon protein ComEB [Staphylococcus aureus subsp. aureus ATCC
BAA-39]
gi|320140525|gb|EFW32379.1| ComE operon protein 2 [Staphylococcus aureus subsp. aureus MRSA131]
gi|320144063|gb|EFW35832.1| ComE operon protein 2 [Staphylococcus aureus subsp. aureus MRSA177]
gi|402348341|gb|EJU83333.1| ComE operon protein 2 [Staphylococcus aureus subsp. aureus CM05]
gi|408423704|emb|CCJ11115.1| Possible competence protein ComEB [Staphylococcus aureus subsp.
aureus ST228]
gi|408425694|emb|CCJ13081.1| Possible competence protein ComEB [Staphylococcus aureus subsp.
aureus ST228]
gi|408427681|emb|CCJ15044.1| Possible competence protein ComEB [Staphylococcus aureus subsp.
aureus ST228]
gi|408429670|emb|CCJ26835.1| Possible competence protein ComEB [Staphylococcus aureus subsp.
aureus ST228]
gi|408431657|emb|CCJ18972.1| Possible competence protein ComEB [Staphylococcus aureus subsp.
aureus ST228]
gi|408433651|emb|CCJ20936.1| Possible competence protein ComEB [Staphylococcus aureus subsp.
aureus ST228]
gi|408435643|emb|CCJ22903.1| Possible competence protein ComEB [Staphylococcus aureus subsp.
aureus ST228]
gi|408437627|emb|CCJ24870.1| Possible competence protein ComEB [Staphylococcus aureus subsp.
aureus ST228]
Length = 156
Score = 78.6 bits (192), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 49/117 (41%), Positives = 65/117 (55%), Gaps = 6/117 (5%)
Query: 89 LEWHEYFMASAFLVAKRSKDPVTRVGAVIVNEDNKIVGTGYNGMPIGCSD--DEFPWDKN 146
++W EYFMA + L+A RS VGA IV +DN+I+ GYNG G DE ++
Sbjct: 7 IKWEEYFMAQSHLLALRSTCQRLSVGATIV-KDNRIIAGGYNGSVAGEVHCIDEGCLIED 65
Query: 147 THDELDMCHAEMNAILN--KNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIYMCD 201
H + HAEMNA+L K T+ +Y + FPC C K IIQ+GIK + Y D
Sbjct: 66 GHC-IRTIHAEMNALLQCAKQGVSTEGATIYVTHFPCLNCTKSIIQAGIKRIYYAED 121
Score = 45.4 bits (106), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 23/54 (42%), Positives = 30/54 (55%), Gaps = 2/54 (3%)
Query: 1 MNAILN--KNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIYMCDKHKQKPAT 52
MNA+L K T+ +Y + FPC C K IIQ+GIK + Y D H + AT
Sbjct: 76 MNALLQCAKQGVSTEGATIYVTHFPCLNCTKSIIQAGIKRIYYAEDYHNHEYAT 129
>gi|49483836|ref|YP_041060.1| deaminase [Staphylococcus aureus subsp. aureus MRSA252]
gi|257425713|ref|ZP_05602137.1| ComE operon protein 2 [Staphylococcus aureus subsp. aureus 55/2053]
gi|257428374|ref|ZP_05604772.1| ComE operon protein 2 [Staphylococcus aureus subsp. aureus 65-1322]
gi|257431011|ref|ZP_05607391.1| competence protein ComEB [Staphylococcus aureus subsp. aureus
68-397]
gi|257433699|ref|ZP_05610057.1| competence protein ComEB [Staphylococcus aureus subsp. aureus
E1410]
gi|257436613|ref|ZP_05612657.1| ComE operon protein 2 [Staphylococcus aureus subsp. aureus M876]
gi|282904170|ref|ZP_06312058.1| ComE operon protein 2 [Staphylococcus aureus subsp. aureus C160]
gi|282905997|ref|ZP_06313852.1| competence protein ComEB [Staphylococcus aureus subsp. aureus
Btn1260]
gi|282908908|ref|ZP_06316726.1| ComE operon protein 2 [Staphylococcus aureus subsp. aureus
WW2703/97]
gi|282911226|ref|ZP_06319028.1| ComE operon protein 2 [Staphylococcus aureus subsp. aureus
WBG10049]
gi|282914395|ref|ZP_06322181.1| ComE operon protein 2 [Staphylococcus aureus subsp. aureus M899]
gi|282919364|ref|ZP_06327099.1| ComE operon protein 2 [Staphylococcus aureus subsp. aureus C427]
gi|282924689|ref|ZP_06332357.1| ComE operon protein 2 [Staphylococcus aureus subsp. aureus C101]
gi|283958352|ref|ZP_06375803.1| ComE operon protein 2 [Staphylococcus aureus subsp. aureus
A017934/97]
gi|293503469|ref|ZP_06667316.1| ComE operon protein 2 [Staphylococcus aureus subsp. aureus 58-424]
gi|293510486|ref|ZP_06669192.1| ComE operon protein 2 [Staphylococcus aureus subsp. aureus M809]
gi|293531026|ref|ZP_06671708.1| ComE operon protein 2 [Staphylococcus aureus subsp. aureus M1015]
gi|415682391|ref|ZP_11447707.1| putative deaminase [Staphylococcus aureus subsp. aureus CGS00]
gi|417887847|ref|ZP_12531966.1| ComE operon protein 2 [Staphylococcus aureus subsp. aureus 21195]
gi|418564879|ref|ZP_13129300.1| ComE operon protein 2 [Staphylococcus aureus subsp. aureus 21264]
gi|418582515|ref|ZP_13146593.1| comE operon protein 2 [Staphylococcus aureus subsp. aureus CIG1605]
gi|418597113|ref|ZP_13160646.1| ComE operon protein 2 [Staphylococcus aureus subsp. aureus 21342]
gi|418601033|ref|ZP_13164481.1| ComE operon protein 2 [Staphylococcus aureus subsp. aureus 21345]
gi|418892318|ref|ZP_13446431.1| comE operon protein 2 [Staphylococcus aureus subsp. aureus CIG1176]
gi|418909440|ref|ZP_13463436.1| comE operon protein 2 [Staphylococcus aureus subsp. aureus CIG149]
gi|418917486|ref|ZP_13471445.1| comE operon protein 2 [Staphylococcus aureus subsp. aureus CIG1267]
gi|418923270|ref|ZP_13477186.1| comE operon protein 2 [Staphylococcus aureus subsp. aureus CIG1233]
gi|418982594|ref|ZP_13530302.1| comE operon protein 2 [Staphylococcus aureus subsp. aureus CIG1242]
gi|418986260|ref|ZP_13533945.1| comE operon protein 2 [Staphylococcus aureus subsp. aureus CIG1500]
gi|49241965|emb|CAG40660.1| putative deaminase [Staphylococcus aureus subsp. aureus MRSA252]
gi|257271407|gb|EEV03553.1| ComE operon protein 2 [Staphylococcus aureus subsp. aureus 55/2053]
gi|257275215|gb|EEV06702.1| ComE operon protein 2 [Staphylococcus aureus subsp. aureus 65-1322]
gi|257278441|gb|EEV09077.1| competence protein ComEB [Staphylococcus aureus subsp. aureus
68-397]
gi|257281792|gb|EEV11929.1| competence protein ComEB [Staphylococcus aureus subsp. aureus
E1410]
gi|257283964|gb|EEV14087.1| ComE operon protein 2 [Staphylococcus aureus subsp. aureus M876]
gi|282313524|gb|EFB43919.1| ComE operon protein 2 [Staphylococcus aureus subsp. aureus C101]
gi|282317174|gb|EFB47548.1| ComE operon protein 2 [Staphylococcus aureus subsp. aureus C427]
gi|282321576|gb|EFB51901.1| ComE operon protein 2 [Staphylococcus aureus subsp. aureus M899]
gi|282324921|gb|EFB55231.1| ComE operon protein 2 [Staphylococcus aureus subsp. aureus
WBG10049]
gi|282327172|gb|EFB57467.1| ComE operon protein 2 [Staphylococcus aureus subsp. aureus
WW2703/97]
gi|282331289|gb|EFB60803.1| competence protein ComEB [Staphylococcus aureus subsp. aureus
Btn1260]
gi|282595788|gb|EFC00752.1| ComE operon protein 2 [Staphylococcus aureus subsp. aureus C160]
gi|283790501|gb|EFC29318.1| ComE operon protein 2 [Staphylococcus aureus subsp. aureus
A017934/97]
gi|290920294|gb|EFD97360.1| ComE operon protein 2 [Staphylococcus aureus subsp. aureus M1015]
gi|291095135|gb|EFE25400.1| ComE operon protein 2 [Staphylococcus aureus subsp. aureus 58-424]
gi|291466850|gb|EFF09370.1| ComE operon protein 2 [Staphylococcus aureus subsp. aureus M809]
gi|315195491|gb|EFU25878.1| putative deaminase [Staphylococcus aureus subsp. aureus CGS00]
gi|341856876|gb|EGS97703.1| ComE operon protein 2 [Staphylococcus aureus subsp. aureus 21195]
gi|371976016|gb|EHO93308.1| ComE operon protein 2 [Staphylococcus aureus subsp. aureus 21264]
gi|374395349|gb|EHQ66616.1| ComE operon protein 2 [Staphylococcus aureus subsp. aureus 21342]
gi|374400280|gb|EHQ71399.1| ComE operon protein 2 [Staphylococcus aureus subsp. aureus 21345]
gi|377704304|gb|EHT28614.1| comE operon protein 2 [Staphylococcus aureus subsp. aureus CIG1500]
gi|377704875|gb|EHT29184.1| comE operon protein 2 [Staphylococcus aureus subsp. aureus CIG1242]
gi|377710925|gb|EHT35163.1| comE operon protein 2 [Staphylococcus aureus subsp. aureus CIG1605]
gi|377730612|gb|EHT54679.1| comE operon protein 2 [Staphylococcus aureus subsp. aureus CIG1176]
gi|377735229|gb|EHT59265.1| comE operon protein 2 [Staphylococcus aureus subsp. aureus CIG1233]
gi|377750660|gb|EHT74598.1| comE operon protein 2 [Staphylococcus aureus subsp. aureus CIG1267]
gi|377752087|gb|EHT76011.1| comE operon protein 2 [Staphylococcus aureus subsp. aureus CIG149]
Length = 153
Score = 78.6 bits (192), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 49/117 (41%), Positives = 65/117 (55%), Gaps = 6/117 (5%)
Query: 89 LEWHEYFMASAFLVAKRSKDPVTRVGAVIVNEDNKIVGTGYNGMPIGCSD--DEFPWDKN 146
++W EYFMA + L+A RS VGA IV +DN+I+ GYNG G DE ++
Sbjct: 4 IKWEEYFMAQSHLLALRSTCQRLSVGATIV-KDNRIIAGGYNGSVAGEVHCIDEGCLIED 62
Query: 147 THDELDMCHAEMNAILN--KNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIYMCD 201
H + HAEMNA+L K T+ +Y + FPC C K IIQ+GIK + Y D
Sbjct: 63 GHC-IRTIHAEMNALLQCAKQGVSTEGATIYVTHFPCLNCTKSIIQAGIKRIYYAED 118
Score = 45.4 bits (106), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 23/54 (42%), Positives = 30/54 (55%), Gaps = 2/54 (3%)
Query: 1 MNAILN--KNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIYMCDKHKQKPAT 52
MNA+L K T+ +Y + FPC C K IIQ+GIK + Y D H + AT
Sbjct: 73 MNALLQCAKQGVSTEGATIYVTHFPCLNCTKSIIQAGIKRIYYAEDYHNHEYAT 126
>gi|417901186|ref|ZP_12545063.1| ComE operon protein 2 [Staphylococcus aureus subsp. aureus 21266]
gi|341846345|gb|EGS87542.1| ComE operon protein 2 [Staphylococcus aureus subsp. aureus 21266]
Length = 153
Score = 78.6 bits (192), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 49/117 (41%), Positives = 65/117 (55%), Gaps = 6/117 (5%)
Query: 89 LEWHEYFMASAFLVAKRSKDPVTRVGAVIVNEDNKIVGTGYNGMPIGCSD--DEFPWDKN 146
++W EYFMA + L+A RS VGA IV +DN+I+ GYNG G DE ++
Sbjct: 4 IKWEEYFMAQSHLLALRSTCQRLSVGATIV-KDNRIIAGGYNGSVAGEVHCIDEGCLIED 62
Query: 147 THDELDMCHAEMNAILN--KNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIYMCD 201
H + HAEMNA+L K T+ +Y + FPC C K IIQ+GIK + Y D
Sbjct: 63 GHC-IRTIHAEMNALLQCAKQGVSTEGATIYVTHFPCLNCTKSIIQAGIKRIYYAED 118
Score = 45.4 bits (106), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 23/54 (42%), Positives = 30/54 (55%), Gaps = 2/54 (3%)
Query: 1 MNAILN--KNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIYMCDKHKQKPAT 52
MNA+L K T+ +Y + FPC C K IIQ+GIK + Y D H + AT
Sbjct: 73 MNALLQCAKQGVSTEGATIYVTHFPCLNCTKSIIQAGIKRIYYAEDYHNHEYAT 126
>gi|148244449|ref|YP_001219143.1| deoxycytidylate deaminase [Candidatus Vesicomyosocius okutanii HA]
gi|146326276|dbj|BAF61419.1| deoxycytidylate deaminase [Candidatus Vesicomyosocius okutanii HA]
Length = 148
Score = 78.6 bits (192), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 48/119 (40%), Positives = 67/119 (56%), Gaps = 5/119 (4%)
Query: 90 EWHEYFMASAFLVAKRSKDPVTRVGAVIVNEDNKIVGTGYNGMPIGCSD-DEFPWDKNTH 148
+W + +++ A V+ SKDP T+VGAV V +++ G+NG P G D DE D+
Sbjct: 6 KWDKRYLSLAKKVSTWSKDPSTQVGAVTVGRKKEVLSQGFNGFPRGIHDTDERYHDREIK 65
Query: 149 DELDMCHAEMNAILNKNSADTK--RCKLYTSLFP-CNECAKVIIQSGIKEVIYMCDKQM 204
+ + HAEMNAI N + T R LY P C+ECAK IIQ GIK V+ K++
Sbjct: 66 YKF-VVHAEMNAIYNATYSGTSLDRATLYVYGLPICSECAKGIIQVGIKRVVIENSKEL 123
>gi|27468193|ref|NP_764830.1| dCMP deaminase [Staphylococcus epidermidis ATCC 12228]
gi|57867051|ref|YP_188732.1| competence protein ComE [Staphylococcus epidermidis RP62A]
gi|293366451|ref|ZP_06613128.1| ComE operon protein 2 [Staphylococcus epidermidis M23864:W2(grey)]
gi|417647017|ref|ZP_12296866.1| ComE operon protein 2 [Staphylococcus epidermidis VCU144]
gi|417659539|ref|ZP_12309139.1| ComE operon protein 2 [Staphylococcus epidermidis VCU045]
gi|417908596|ref|ZP_12552353.1| ComE operon protein 2 [Staphylococcus epidermidis VCU037]
gi|417912277|ref|ZP_12555972.1| ComE operon protein 2 [Staphylococcus epidermidis VCU105]
gi|418605471|ref|ZP_13168795.1| ComE operon protein 2 [Staphylococcus epidermidis VCU041]
gi|418606035|ref|ZP_13169331.1| ComE operon protein 2 [Staphylococcus epidermidis VCU057]
gi|418612807|ref|ZP_13175831.1| ComE operon protein 2 [Staphylococcus epidermidis VCU117]
gi|418616415|ref|ZP_13179340.1| ComE operon protein 2 [Staphylococcus epidermidis VCU120]
gi|418626373|ref|ZP_13188985.1| ComE operon protein 2 [Staphylococcus epidermidis VCU126]
gi|419769609|ref|ZP_14295703.1| ComE operon protein 2 [Staphylococcus aureus subsp. aureus IS-250]
gi|419771827|ref|ZP_14297873.1| ComE operon protein 2 [Staphylococcus aureus subsp. aureus IS-K]
gi|420170295|ref|ZP_14676856.1| ComE operon protein 2 [Staphylococcus epidermidis NIHLM070]
gi|420172641|ref|ZP_14679140.1| ComE operon protein 2 [Staphylococcus epidermidis NIHLM067]
gi|420183250|ref|ZP_14689383.1| ComE operon protein 2 [Staphylococcus epidermidis NIHLM049]
gi|420187208|ref|ZP_14693229.1| ComE operon protein 2 [Staphylococcus epidermidis NIHLM039]
gi|420194886|ref|ZP_14700683.1| ComE operon protein 2 [Staphylococcus epidermidis NIHLM021]
gi|420197467|ref|ZP_14703191.1| ComE operon protein 2 [Staphylococcus epidermidis NIHLM020]
gi|420209094|ref|ZP_14714532.1| ComE operon protein 2 [Staphylococcus epidermidis NIHLM003]
gi|420211250|ref|ZP_14716624.1| ComE operon protein 2 [Staphylococcus epidermidis NIHLM001]
gi|420214048|ref|ZP_14719328.1| ComE operon protein 2 [Staphylococcus epidermidis NIH05005]
gi|420216198|ref|ZP_14721414.1| ComE operon protein 2 [Staphylococcus epidermidis NIH05001]
gi|420220534|ref|ZP_14725493.1| ComE operon protein 2 [Staphylococcus epidermidis NIH04008]
gi|420221626|ref|ZP_14726553.1| ComE operon protein 2 [Staphylococcus epidermidis NIH08001]
gi|420225785|ref|ZP_14730612.1| ComE operon protein 2 [Staphylococcus epidermidis NIH06004]
gi|420227378|ref|ZP_14732147.1| ComE operon protein 2 [Staphylococcus epidermidis NIH05003]
gi|420229692|ref|ZP_14734397.1| ComE operon protein 2 [Staphylococcus epidermidis NIH04003]
gi|420232103|ref|ZP_14736745.1| ComE operon protein 2 [Staphylococcus epidermidis NIH051668]
gi|420234750|ref|ZP_14739310.1| ComE operon protein 2 [Staphylococcus epidermidis NIH051475]
gi|27315739|gb|AAO04874.1|AE016748_108 putative dCMP deaminase [Staphylococcus epidermidis ATCC 12228]
gi|57637709|gb|AAW54497.1| comE operon protein 2 [Staphylococcus epidermidis RP62A]
gi|291319220|gb|EFE59589.1| ComE operon protein 2 [Staphylococcus epidermidis M23864:W2(grey)]
gi|329725366|gb|EGG61849.1| ComE operon protein 2 [Staphylococcus epidermidis VCU144]
gi|329735176|gb|EGG71468.1| ComE operon protein 2 [Staphylococcus epidermidis VCU045]
gi|341651288|gb|EGS75093.1| ComE operon protein 2 [Staphylococcus epidermidis VCU105]
gi|341655957|gb|EGS79680.1| ComE operon protein 2 [Staphylococcus epidermidis VCU037]
gi|374402360|gb|EHQ73390.1| ComE operon protein 2 [Staphylococcus epidermidis VCU041]
gi|374409474|gb|EHQ80265.1| ComE operon protein 2 [Staphylococcus epidermidis VCU057]
gi|374817884|gb|EHR82059.1| ComE operon protein 2 [Staphylococcus epidermidis VCU117]
gi|374821241|gb|EHR85308.1| ComE operon protein 2 [Staphylococcus epidermidis VCU120]
gi|374832807|gb|EHR96512.1| ComE operon protein 2 [Staphylococcus epidermidis VCU126]
gi|383358228|gb|EID35689.1| ComE operon protein 2 [Staphylococcus aureus subsp. aureus IS-250]
gi|383360646|gb|EID38041.1| ComE operon protein 2 [Staphylococcus aureus subsp. aureus IS-K]
gi|394240633|gb|EJD86056.1| ComE operon protein 2 [Staphylococcus epidermidis NIHLM070]
gi|394241802|gb|EJD87211.1| ComE operon protein 2 [Staphylococcus epidermidis NIHLM067]
gi|394249713|gb|EJD94926.1| ComE operon protein 2 [Staphylococcus epidermidis NIHLM049]
gi|394256187|gb|EJE01120.1| ComE operon protein 2 [Staphylococcus epidermidis NIHLM039]
gi|394263946|gb|EJE08667.1| ComE operon protein 2 [Staphylococcus epidermidis NIHLM021]
gi|394266274|gb|EJE10920.1| ComE operon protein 2 [Staphylococcus epidermidis NIHLM020]
gi|394279322|gb|EJE23630.1| ComE operon protein 2 [Staphylococcus epidermidis NIHLM003]
gi|394281703|gb|EJE25929.1| ComE operon protein 2 [Staphylococcus epidermidis NIHLM001]
gi|394283970|gb|EJE28131.1| ComE operon protein 2 [Staphylococcus epidermidis NIH05005]
gi|394285887|gb|EJE29953.1| ComE operon protein 2 [Staphylococcus epidermidis NIH04008]
gi|394290252|gb|EJE34116.1| ComE operon protein 2 [Staphylococcus epidermidis NIH08001]
gi|394292288|gb|EJE36047.1| ComE operon protein 2 [Staphylococcus epidermidis NIH05001]
gi|394293219|gb|EJE36942.1| ComE operon protein 2 [Staphylococcus epidermidis NIH06004]
gi|394297184|gb|EJE40793.1| ComE operon protein 2 [Staphylococcus epidermidis NIH05003]
gi|394298986|gb|EJE42541.1| ComE operon protein 2 [Staphylococcus epidermidis NIH04003]
gi|394301825|gb|EJE45279.1| ComE operon protein 2 [Staphylococcus epidermidis NIH051668]
gi|394303993|gb|EJE47403.1| ComE operon protein 2 [Staphylococcus epidermidis NIH051475]
Length = 153
Score = 78.6 bits (192), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 49/117 (41%), Positives = 65/117 (55%), Gaps = 6/117 (5%)
Query: 89 LEWHEYFMASAFLVAKRSKDPVTRVGAVIVNEDNKIVGTGYNGMPIGCSD--DEFPWDKN 146
++W EYFMA + L+A RS VGA IV +DN+I+ GYNG G DE ++
Sbjct: 4 IKWEEYFMAQSHLLALRSTCKRLSVGATIV-KDNRIIAGGYNGSVAGEVHCIDEGCLIED 62
Query: 147 THDELDMCHAEMNAILN--KNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIYMCD 201
H + HAEMNA+L K T+ +Y + FPC C K IIQ+GIK + Y D
Sbjct: 63 GHC-IRTIHAEMNALLQCAKQGVSTEGATIYVTHFPCLNCTKSIIQAGIKTIYYAQD 118
Score = 42.7 bits (99), Expect = 0.094, Method: Compositional matrix adjust.
Identities = 21/48 (43%), Positives = 27/48 (56%), Gaps = 2/48 (4%)
Query: 1 MNAILN--KNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIYMCDKH 46
MNA+L K T+ +Y + FPC C K IIQ+GIK + Y D H
Sbjct: 73 MNALLQCAKQGVSTEGATIYVTHFPCLNCTKSIIQAGIKTIYYAQDYH 120
>gi|418621407|ref|ZP_13184183.1| ComE operon protein 2 [Staphylococcus epidermidis VCU123]
gi|374829351|gb|EHR93155.1| ComE operon protein 2 [Staphylococcus epidermidis VCU123]
Length = 149
Score = 78.6 bits (192), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 49/117 (41%), Positives = 65/117 (55%), Gaps = 6/117 (5%)
Query: 89 LEWHEYFMASAFLVAKRSKDPVTRVGAVIVNEDNKIVGTGYNGMPIGCSD--DEFPWDKN 146
++W EYFMA + L+A RS VGA IV +DN+I+ GYNG G DE ++
Sbjct: 4 IKWEEYFMAQSHLLALRSTCKRLSVGATIV-KDNRIIAGGYNGSVAGEVHCIDEGCLIED 62
Query: 147 THDELDMCHAEMNAILN--KNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIYMCD 201
H + HAEMNA+L K T+ +Y + FPC C K IIQ+GIK + Y D
Sbjct: 63 GHC-IRTIHAEMNALLQCAKQGVSTEGATIYVTHFPCLNCTKSIIQAGIKTIYYAQD 118
Score = 42.4 bits (98), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 22/53 (41%), Positives = 28/53 (52%), Gaps = 2/53 (3%)
Query: 1 MNAILN--KNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIYMCDKHKQKPA 51
MNA+L K T+ +Y + FPC C K IIQ+GIK + Y D H A
Sbjct: 73 MNALLQCAKQGVSTEGATIYVTHFPCLNCTKSIIQAGIKTIYYAQDYHNNDYA 125
>gi|406668815|ref|ZP_11076106.1| ComE operon protein 2 [Facklamia ignava CCUG 37419]
gi|405585096|gb|EKB58931.1| ComE operon protein 2 [Facklamia ignava CCUG 37419]
Length = 160
Score = 78.6 bits (192), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 49/119 (41%), Positives = 70/119 (58%), Gaps = 10/119 (8%)
Query: 89 LEWHEYFMASAFLVAKRSKDPVTRVGAVIVNEDNKIVGTGYNGMPIG---CSDDE-FPWD 144
+ W +YFMA + +++ RS VGAVIV +N+IV TGYNG G C D F D
Sbjct: 4 ISWTDYFMAQSLVISTRSTCDRLMVGAVIV-RNNRIVATGYNGSVSGLTHCIDHGCFVVD 62
Query: 145 KNTHDELDMCHAEMNAILN--KNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIYMCD 201
+ + HAE+NA++ K T+ ++Y + FPC C+KVIIQ+GIK+V Y+ D
Sbjct: 63 GHC---IRTIHAEVNAVIQCAKMGTPTEGAEIYITHFPCYNCSKVIIQAGIKKVHYLYD 118
Score = 41.6 bits (96), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 22/55 (40%), Positives = 35/55 (63%), Gaps = 3/55 (5%)
Query: 1 MNAILN--KNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIYMCDKHKQKPATI 53
+NA++ K T+ ++Y + FPC C+KVIIQ+GIK+V Y+ D ++ P I
Sbjct: 73 VNAVIQCAKMGTPTEGAEIYITHFPCYNCSKVIIQAGIKKVHYLYD-YRNDPNAI 126
>gi|295428166|ref|ZP_06820798.1| ComE operon protein 2 [Staphylococcus aureus subsp. aureus EMRSA16]
gi|297590868|ref|ZP_06949506.1| competence protein ComEB [Staphylococcus aureus subsp. aureus MN8]
gi|384867438|ref|YP_005747634.1| ComE operon protein ComEB [Staphylococcus aureus subsp. aureus
TCH60]
gi|295128524|gb|EFG58158.1| ComE operon protein 2 [Staphylococcus aureus subsp. aureus EMRSA16]
gi|297575754|gb|EFH94470.1| competence protein ComEB [Staphylococcus aureus subsp. aureus MN8]
gi|312437943|gb|ADQ77014.1| ComE operon protein ComEB [Staphylococcus aureus subsp. aureus
TCH60]
Length = 156
Score = 78.6 bits (192), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 49/117 (41%), Positives = 65/117 (55%), Gaps = 6/117 (5%)
Query: 89 LEWHEYFMASAFLVAKRSKDPVTRVGAVIVNEDNKIVGTGYNGMPIGCSD--DEFPWDKN 146
++W EYFMA + L+A RS VGA IV +DN+I+ GYNG G DE ++
Sbjct: 7 IKWEEYFMAQSHLLALRSTCQRLSVGATIV-KDNRIIAGGYNGSVAGEVHCIDEGCLIED 65
Query: 147 THDELDMCHAEMNAILN--KNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIYMCD 201
H + HAEMNA+L K T+ +Y + FPC C K IIQ+GIK + Y D
Sbjct: 66 GHC-IRTIHAEMNALLQCAKQGVSTEGATIYVTHFPCLNCTKSIIQAGIKRIYYAED 121
Score = 45.4 bits (106), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 23/54 (42%), Positives = 30/54 (55%), Gaps = 2/54 (3%)
Query: 1 MNAILN--KNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIYMCDKHKQKPAT 52
MNA+L K T+ +Y + FPC C K IIQ+GIK + Y D H + AT
Sbjct: 76 MNALLQCAKQGVSTEGATIYVTHFPCLNCTKSIIQAGIKRIYYAEDYHNHEYAT 129
>gi|298675909|ref|YP_003727659.1| CMP/dCMP deaminase zinc-binding protein [Methanohalobium
evestigatum Z-7303]
gi|298288897|gb|ADI74863.1| CMP/dCMP deaminase zinc-binding protein [Methanohalobium
evestigatum Z-7303]
Length = 155
Score = 78.6 bits (192), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 50/127 (39%), Positives = 69/127 (54%), Gaps = 12/127 (9%)
Query: 86 DDVLEWHEYFMASAFLVAKRSKDPVTRVGAVIVNEDNKIVGTGYNGMP--------IGCS 137
+D L EYF+ A +VAKR+ +VGAVIV D +I+ TGYNG P IGC
Sbjct: 5 EDRLSIDEYFLEIASVVAKRATCLRNKVGAVIV-RDKRIISTGYNGAPSNLEHCLDIGCI 63
Query: 138 DDEFPWDKNT-HDELDMCHAEMNAILNK--NSADTKRCKLYTSLFPCNECAKVIIQSGIK 194
++ + T H++ HAE NAI+ + T +Y + PC CAK+II + IK
Sbjct: 64 RQQYNIESGTQHEKCRAVHAEQNAIIQAALHGVSTDNATIYCTHQPCILCAKMIINANIK 123
Query: 195 EVIYMCD 201
+VIY D
Sbjct: 124 KVIYFSD 130
>gi|448932193|gb|AGE55753.1| dCMP deaminase [Acanthocystis turfacea Chlorella virus MN0810.1]
Length = 156
Score = 78.6 bits (192), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 39/106 (36%), Positives = 65/106 (61%), Gaps = 3/106 (2%)
Query: 94 YFMASAFLVAKRSKDPVTRVGAVIVNEDNKIVGTGYNGMPIGCSDDEFPWDKNTHDELDM 153
++ S + SKDP T+V A++++ ++ I+ GYNG+P G + E W K + +
Sbjct: 7 FYALSCYHAELFSKDPNTKVAAMVIDNNHNILSVGYNGLPRGFEETEERWSKPEKYQY-V 65
Query: 154 CHAEMNAILN--KNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVI 197
HAE NAI +N A + ++LFPC++CA++IIQ+GIK+V+
Sbjct: 66 VHAEANAICTAARNGAKLDGGSIVSTLFPCDQCARLIIQAGIKKVV 111
Score = 42.4 bits (98), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 24/68 (35%), Positives = 41/68 (60%), Gaps = 4/68 (5%)
Query: 7 KNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIYM-CDKHKQKPATIA-SKRMFD--AA 62
+N A + ++LFPC++CA++IIQ+GIK+V+ D++ + SK MFD
Sbjct: 78 RNGAKLDGGSIVSTLFPCDQCARLIIQAGIKKVVTARPDENSSWLQSFGYSKEMFDECGV 137
Query: 63 KVHYWSEM 70
++ Y SE+
Sbjct: 138 EIEYISEV 145
>gi|377555530|ref|ZP_09785258.1| CMP/dCMP deaminase, zinc-binding protein [endosymbiont of
Bathymodiolus sp.]
Length = 147
Score = 78.6 bits (192), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 46/118 (38%), Positives = 65/118 (55%), Gaps = 3/118 (2%)
Query: 90 EWHEYFMASAFLVAKRSKDPVTRVGAVIVNEDNKIVGTGYNGMPIGCSDDEFPWDKNTHD 149
+W E ++A A VA SKDP T+VGAV V +++ G+NG P +D + ++
Sbjct: 6 KWDERYLALAKEVATWSKDPSTQVGAVTVGSKKEVLSQGFNGFPRNINDTDERYNNRATK 65
Query: 150 ELDMCHAEMNAILNKNSADTK--RCKLYTSLFP-CNECAKVIIQSGIKEVIYMCDKQM 204
+ HAEMNAI N + T LY P C+ECAK IIQ GIK+V+ K++
Sbjct: 66 YKFVVHAEMNAIYNATYSGTSLDGATLYVYGLPICSECAKGIIQVGIKKVVVEKSKEL 123
Score = 38.9 bits (89), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 30/71 (42%), Positives = 37/71 (52%), Gaps = 9/71 (12%)
Query: 1 MNAILNKNSADTK--RCKLYTSLFP-CNECAKVIIQSGIKEVIYMCDKHKQ----KPATI 53
MNAI N + T LY P C+ECAK IIQ GIK+V+ +K K+ +
Sbjct: 74 MNAIYNATYSGTSLDGATLYVYGLPICSECAKGIIQVGIKKVV--VEKSKELDNWNDSVK 131
Query: 54 ASKRMFDAAKV 64
SK MFD A V
Sbjct: 132 LSKAMFDEAGV 142
>gi|445059512|ref|YP_007384916.1| putative deaminase [Staphylococcus warneri SG1]
gi|443425569|gb|AGC90472.1| putative deaminase [Staphylococcus warneri SG1]
Length = 153
Score = 78.6 bits (192), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 49/117 (41%), Positives = 65/117 (55%), Gaps = 6/117 (5%)
Query: 89 LEWHEYFMASAFLVAKRSKDPVTRVGAVIVNEDNKIVGTGYNGMPIGCSD--DEFPWDKN 146
++W EYFMA + L+A RS VGA IV +DN+I+ GYNG G DE ++
Sbjct: 4 IKWEEYFMAQSHLLALRSTCQRLSVGATIV-KDNRIIAGGYNGSVAGEVHCIDEGCLIED 62
Query: 147 THDELDMCHAEMNAILN--KNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIYMCD 201
H + HAEMNA+L K T+ +Y + FPC C K IIQ+GIK + Y D
Sbjct: 63 GHC-IRTIHAEMNALLQCAKQGVSTEGATIYVTHFPCLNCTKSIIQAGIKTIYYAED 118
Score = 45.1 bits (105), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 24/68 (35%), Positives = 35/68 (51%), Gaps = 6/68 (8%)
Query: 1 MNAILN--KNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIYMCDKHKQKPATIASKRM 58
MNA+L K T+ +Y + FPC C K IIQ+GIK + Y D H + A ++
Sbjct: 73 MNALLQCAKQGVSTEGATIYVTHFPCLNCTKSIIQAGIKTIYYAEDYHNHEYAM----QL 128
Query: 59 FDAAKVHY 66
D + + Y
Sbjct: 129 LDQSSIEY 136
>gi|242242866|ref|ZP_04797311.1| competence protein ComEB [Staphylococcus epidermidis W23144]
gi|416125328|ref|ZP_11595926.1| comE operon protein 2 [Staphylococcus epidermidis FRI909]
gi|418328773|ref|ZP_12939872.1| ComE operon protein 2 [Staphylococcus epidermidis 14.1.R1.SE]
gi|418615672|ref|ZP_13178611.1| ComE operon protein 2 [Staphylococcus epidermidis VCU118]
gi|418631441|ref|ZP_13193904.1| ComE operon protein 2 [Staphylococcus epidermidis VCU128]
gi|418633494|ref|ZP_13195907.1| ComE operon protein 2 [Staphylococcus epidermidis VCU129]
gi|420174645|ref|ZP_14681094.1| ComE operon protein 2 [Staphylococcus epidermidis NIHLM061]
gi|420190203|ref|ZP_14696147.1| ComE operon protein 2 [Staphylococcus epidermidis NIHLM037]
gi|420192340|ref|ZP_14698200.1| ComE operon protein 2 [Staphylococcus epidermidis NIHLM023]
gi|420204507|ref|ZP_14710065.1| ComE operon protein 2 [Staphylococcus epidermidis NIHLM015]
gi|242233679|gb|EES35991.1| competence protein ComEB [Staphylococcus epidermidis W23144]
gi|319400925|gb|EFV89144.1| comE operon protein 2 [Staphylococcus epidermidis FRI909]
gi|365231619|gb|EHM72652.1| ComE operon protein 2 [Staphylococcus epidermidis 14.1.R1.SE]
gi|374816722|gb|EHR80921.1| ComE operon protein 2 [Staphylococcus epidermidis VCU118]
gi|374835332|gb|EHR98948.1| ComE operon protein 2 [Staphylococcus epidermidis VCU128]
gi|374839247|gb|EHS02765.1| ComE operon protein 2 [Staphylococcus epidermidis VCU129]
gi|394244876|gb|EJD90208.1| ComE operon protein 2 [Staphylococcus epidermidis NIHLM061]
gi|394259094|gb|EJE03964.1| ComE operon protein 2 [Staphylococcus epidermidis NIHLM037]
gi|394261551|gb|EJE06348.1| ComE operon protein 2 [Staphylococcus epidermidis NIHLM023]
gi|394273517|gb|EJE17948.1| ComE operon protein 2 [Staphylococcus epidermidis NIHLM015]
Length = 153
Score = 78.6 bits (192), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 49/117 (41%), Positives = 65/117 (55%), Gaps = 6/117 (5%)
Query: 89 LEWHEYFMASAFLVAKRSKDPVTRVGAVIVNEDNKIVGTGYNGMPIGCSD--DEFPWDKN 146
++W EYFMA + L+A RS VGA IV +DN+I+ GYNG G DE ++
Sbjct: 4 IKWEEYFMAQSHLLALRSTCRRLSVGATIV-KDNRIIAGGYNGSVAGEVHCIDEGCLIED 62
Query: 147 THDELDMCHAEMNAILN--KNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIYMCD 201
H + HAEMNA+L K T+ +Y + FPC C K IIQ+GIK + Y D
Sbjct: 63 GHC-IRTIHAEMNALLQCAKQGVSTEGATIYVTHFPCLNCTKSIIQAGIKTIYYAQD 118
Score = 42.7 bits (99), Expect = 0.078, Method: Compositional matrix adjust.
Identities = 22/53 (41%), Positives = 28/53 (52%), Gaps = 2/53 (3%)
Query: 1 MNAILN--KNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIYMCDKHKQKPA 51
MNA+L K T+ +Y + FPC C K IIQ+GIK + Y D H A
Sbjct: 73 MNALLQCAKQGVSTEGATIYVTHFPCLNCTKSIIQAGIKTIYYAQDYHNHDYA 125
>gi|333897996|ref|YP_004471870.1| CMP/dCMP deaminase zinc-binding protein [Thermoanaerobacterium
xylanolyticum LX-11]
gi|333113261|gb|AEF18198.1| CMP/dCMP deaminase zinc-binding protein [Thermoanaerobacterium
xylanolyticum LX-11]
Length = 161
Score = 78.6 bits (192), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 50/122 (40%), Positives = 62/122 (50%), Gaps = 12/122 (9%)
Query: 91 WHEYFMASAFLVAKRSKDPVTRVGAVIVNEDNKIVGTGYNGMP--------IGCSDDEFP 142
W EYFM +V RS +VGAVIV +D I+ TGYNG P +GC +
Sbjct: 18 WDEYFMMVVDVVKTRSTCLRRQVGAVIV-KDKHIISTGYNGAPTGLKHCEEVGCMRESLN 76
Query: 143 WDKNTHDEL-DMCHAEMNAILNK--NSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIYM 199
EL HAE NAI+ N TK +Y S PC+ CAK+II +GIK V+Y
Sbjct: 77 IPSGERHELCRGTHAEQNAIIQAALNGVSTKDATIYVSASPCSMCAKMIINAGIKRVVYE 136
Query: 200 CD 201
D
Sbjct: 137 GD 138
Score = 41.2 bits (95), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 21/45 (46%), Positives = 27/45 (60%), Gaps = 2/45 (4%)
Query: 2 NAILNK--NSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIYMCD 44
NAI+ N TK +Y S PC+ CAK+II +GIK V+Y D
Sbjct: 94 NAIIQAALNGVSTKDATIYVSASPCSMCAKMIINAGIKRVVYEGD 138
>gi|149191235|ref|ZP_01869491.1| deoxycytidylate deaminase [Vibrio shilonii AK1]
gi|148834905|gb|EDL51886.1| deoxycytidylate deaminase [Vibrio shilonii AK1]
Length = 147
Score = 78.6 bits (192), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 48/109 (44%), Positives = 62/109 (56%), Gaps = 3/109 (2%)
Query: 88 VLEWHEYFMASAFLVAKRSKDPVTRVGAVIVNEDNKIVGTGYNGMPIGCSDDEFPWDKNT 147
V +W + F+ A LV SKDP T+VGAVI ++N+IV G+NG P G SD D+
Sbjct: 2 VSKWAKRFIQMAELVGSWSKDPSTQVGAVI-TKNNRIVSVGFNGYPHGISDSAEV-DERE 59
Query: 148 HDELDMCHAEMNAILNKNSADTKRCKLYTSLFPCNECAKVIIQSGIKEV 196
L HAE NAIL D C+++ + FPC CA IIQ+GI V
Sbjct: 60 TKYLKTLHAEENAILFAKR-DLDGCEIWVTHFPCPNCAAKIIQTGISVV 107
>gi|365157937|ref|ZP_09354181.1| ComE operon protein 2 [Bacillus smithii 7_3_47FAA]
gi|363622347|gb|EHL73513.1| ComE operon protein 2 [Bacillus smithii 7_3_47FAA]
Length = 187
Score = 78.6 bits (192), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 49/116 (42%), Positives = 62/116 (53%), Gaps = 10/116 (8%)
Query: 89 LEWHEYFMASAFLVAKRSKDPVTRVGAVIVNEDNKIVGTGYNGMPIGCSDDEFPWDKNTH 148
+ WH+YFMA + L++ RS VGA IV E +I+ GYNG G E D +
Sbjct: 5 ITWHQYFMAQSHLLSLRSTCTRLAVGATIVRE-KRIIAGGYNGSIAG---GEHCVDVGCY 60
Query: 149 DELDMC----HAEMNAILN--KNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIY 198
E C HAEMNAIL K TK ++Y + FPC +C K IIQ+GI V Y
Sbjct: 61 MEEGHCIRTIHAEMNAILQCAKFGVPTKNAEIYVTHFPCVQCTKSIIQAGISSVYY 116
Score = 43.1 bits (100), Expect = 0.071, Method: Compositional matrix adjust.
Identities = 29/82 (35%), Positives = 38/82 (46%), Gaps = 12/82 (14%)
Query: 1 MNAILN--KNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIYMCDKHKQKPATIASKRM 58
MNAIL K TK ++Y + FPC +C K IIQ+GI V Y H S +
Sbjct: 74 MNAILQCAKFGVPTKNAEIYVTHFPCVQCTKSIIQAGISSVYYANGYHNHP----FSLEL 129
Query: 59 FDAAKVHY------WSEMDKMN 74
F+ A V W +D+ N
Sbjct: 130 FEKAGVKVEHIPFEWPIIDRKN 151
>gi|417643113|ref|ZP_12293175.1| ComE operon protein 2 [Staphylococcus warneri VCU121]
gi|330686098|gb|EGG97719.1| ComE operon protein 2 [Staphylococcus epidermidis VCU121]
Length = 153
Score = 78.6 bits (192), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 49/117 (41%), Positives = 65/117 (55%), Gaps = 6/117 (5%)
Query: 89 LEWHEYFMASAFLVAKRSKDPVTRVGAVIVNEDNKIVGTGYNGMPIGCSD--DEFPWDKN 146
++W EYFMA + L+A RS VGA IV +DN+I+ GYNG G DE ++
Sbjct: 4 IKWEEYFMAQSHLLALRSTCQRLSVGATIV-KDNRIIAGGYNGSVAGEVHCIDEGCLIED 62
Query: 147 THDELDMCHAEMNAILN--KNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIYMCD 201
H + HAEMNA+L K T+ +Y + FPC C K IIQ+GIK + Y D
Sbjct: 63 GHC-IRTIHAEMNALLQCAKQGVSTEGATIYVTHFPCLNCTKSIIQAGIKTIYYAED 118
Score = 44.7 bits (104), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 24/68 (35%), Positives = 35/68 (51%), Gaps = 6/68 (8%)
Query: 1 MNAILN--KNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIYMCDKHKQKPATIASKRM 58
MNA+L K T+ +Y + FPC C K IIQ+GIK + Y D H + A ++
Sbjct: 73 MNALLQCAKQGVSTEGATIYVTHFPCLNCTKSIIQAGIKTIYYAEDYHNHEYAM----QL 128
Query: 59 FDAAKVHY 66
D + + Y
Sbjct: 129 LDQSGIEY 136
>gi|387602929|ref|YP_005734450.1| ComE operon protein 2 [Staphylococcus aureus subsp. aureus ST398]
gi|404478939|ref|YP_006710369.1| deaminase [Staphylococcus aureus 08BA02176]
gi|418310180|ref|ZP_12921730.1| ComE operon protein 2 [Staphylococcus aureus subsp. aureus 21331]
gi|283470867|emb|CAQ50078.1| ComE operon protein 2 [Staphylococcus aureus subsp. aureus ST398]
gi|365237637|gb|EHM78483.1| ComE operon protein 2 [Staphylococcus aureus subsp. aureus 21331]
gi|404440428|gb|AFR73621.1| putative deaminase [Staphylococcus aureus 08BA02176]
Length = 153
Score = 78.2 bits (191), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 49/117 (41%), Positives = 65/117 (55%), Gaps = 6/117 (5%)
Query: 89 LEWHEYFMASAFLVAKRSKDPVTRVGAVIVNEDNKIVGTGYNGMPIGCSD--DEFPWDKN 146
++W EYFMA + L+A RS VGA IV +DN+I+ GYNG G DE ++
Sbjct: 4 IKWEEYFMAQSHLLALRSTCQRLSVGATIV-KDNRIIAGGYNGSVAGEVHCIDEGCLIED 62
Query: 147 THDELDMCHAEMNAILN--KNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIYMCD 201
H + HAEMNA+L K T+ +Y + FPC C K IIQ+GIK + Y D
Sbjct: 63 GHC-IRTIHAEMNALLQCAKQGVSTEDATIYVTHFPCLNCTKSIIQAGIKRIYYAED 118
Score = 45.1 bits (105), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 23/54 (42%), Positives = 30/54 (55%), Gaps = 2/54 (3%)
Query: 1 MNAILN--KNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIYMCDKHKQKPAT 52
MNA+L K T+ +Y + FPC C K IIQ+GIK + Y D H + AT
Sbjct: 73 MNALLQCAKQGVSTEDATIYVTHFPCLNCTKSIIQAGIKRIYYAEDYHNHEYAT 126
>gi|420199830|ref|ZP_14705500.1| ComE operon protein 2 [Staphylococcus epidermidis NIHLM031]
gi|394271237|gb|EJE15733.1| ComE operon protein 2 [Staphylococcus epidermidis NIHLM031]
Length = 153
Score = 78.2 bits (191), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 49/117 (41%), Positives = 65/117 (55%), Gaps = 6/117 (5%)
Query: 89 LEWHEYFMASAFLVAKRSKDPVTRVGAVIVNEDNKIVGTGYNGMPIGCSD--DEFPWDKN 146
++W EYFMA + L+A RS VGA IV +DN+I+ GYNG G DE ++
Sbjct: 4 IKWEEYFMAQSHLLALRSTCRRLSVGATIV-KDNRIIAGGYNGSVAGEVHCIDEGCLIED 62
Query: 147 THDELDMCHAEMNAILN--KNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIYMCD 201
H + HAEMNA+L K T+ +Y + FPC C K IIQ+GIK + Y D
Sbjct: 63 GHC-IRTIHAEMNALLQCAKQGVSTEGATIYVTHFPCLNCTKSIIQAGIKTIYYAQD 118
Score = 43.1 bits (100), Expect = 0.075, Method: Compositional matrix adjust.
Identities = 22/53 (41%), Positives = 28/53 (52%), Gaps = 2/53 (3%)
Query: 1 MNAILN--KNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIYMCDKHKQKPA 51
MNA+L K T+ +Y + FPC C K IIQ+GIK + Y D H A
Sbjct: 73 MNALLQCAKQGVSTEGATIYVTHFPCLNCTKSIIQAGIKTIYYAQDYHNHDYA 125
>gi|386729290|ref|YP_006195673.1| ComE operon protein 2 [Staphylococcus aureus subsp. aureus 71193]
gi|418978313|ref|ZP_13526114.1| ComE operon protein 2 [Staphylococcus aureus subsp. aureus DR10]
gi|379993929|gb|EIA15374.1| ComE operon protein 2 [Staphylococcus aureus subsp. aureus DR10]
gi|384230583|gb|AFH69830.1| ComE operon protein 2 [Staphylococcus aureus subsp. aureus 71193]
Length = 156
Score = 78.2 bits (191), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 49/117 (41%), Positives = 65/117 (55%), Gaps = 6/117 (5%)
Query: 89 LEWHEYFMASAFLVAKRSKDPVTRVGAVIVNEDNKIVGTGYNGMPIGCSD--DEFPWDKN 146
++W EYFMA + L+A RS VGA IV +DN+I+ GYNG G DE ++
Sbjct: 7 IKWEEYFMAQSHLLALRSTCQRLSVGATIV-KDNRIIAGGYNGSVAGEVHCIDEGCLIED 65
Query: 147 THDELDMCHAEMNAILN--KNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIYMCD 201
H + HAEMNA+L K T+ +Y + FPC C K IIQ+GIK + Y D
Sbjct: 66 GHC-IRTIHAEMNALLQCAKQGVSTEDATIYVTHFPCLNCTKSIIQAGIKRIYYAED 121
Score = 45.1 bits (105), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 23/54 (42%), Positives = 30/54 (55%), Gaps = 2/54 (3%)
Query: 1 MNAILN--KNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIYMCDKHKQKPAT 52
MNA+L K T+ +Y + FPC C K IIQ+GIK + Y D H + AT
Sbjct: 76 MNALLQCAKQGVSTEDATIYVTHFPCLNCTKSIIQAGIKRIYYAEDYHNHEYAT 129
>gi|239637600|ref|ZP_04678572.1| ComE operon protein 2 [Staphylococcus warneri L37603]
gi|239596818|gb|EEQ79343.1| ComE operon protein 2 [Staphylococcus warneri L37603]
Length = 153
Score = 78.2 bits (191), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 49/117 (41%), Positives = 65/117 (55%), Gaps = 6/117 (5%)
Query: 89 LEWHEYFMASAFLVAKRSKDPVTRVGAVIVNEDNKIVGTGYNGMPIGCSD--DEFPWDKN 146
++W EYFMA + L+A RS VGA IV +DN+I+ GYNG G DE ++
Sbjct: 4 IKWEEYFMAQSHLLALRSTCQRLSVGATIV-KDNRIIAGGYNGSVAGEVHCIDEGCLIED 62
Query: 147 THDELDMCHAEMNAILN--KNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIYMCD 201
H + HAEMNA+L K T+ +Y + FPC C K IIQ+GIK + Y D
Sbjct: 63 GHC-IRTIHAEMNALLQCAKQGVSTEGATIYVTHFPCLNCTKSIIQAGIKTIYYAED 118
Score = 45.1 bits (105), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 24/68 (35%), Positives = 35/68 (51%), Gaps = 6/68 (8%)
Query: 1 MNAILN--KNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIYMCDKHKQKPATIASKRM 58
MNA+L K T+ +Y + FPC C K IIQ+GIK + Y D H + A ++
Sbjct: 73 MNALLQCAKQGVSTEGATIYVTHFPCLNCTKSIIQAGIKTIYYAEDYHNHEYAM----KL 128
Query: 59 FDAAKVHY 66
D + + Y
Sbjct: 129 LDQSGIEY 136
>gi|223044386|ref|ZP_03614420.1| ComE operon protein 2 [Staphylococcus capitis SK14]
gi|417907922|ref|ZP_12551689.1| ComE operon protein 2 [Staphylococcus capitis VCU116]
gi|222442255|gb|EEE48366.1| ComE operon protein 2 [Staphylococcus capitis SK14]
gi|341595009|gb|EGS37687.1| ComE operon protein 2 [Staphylococcus capitis VCU116]
Length = 153
Score = 78.2 bits (191), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 49/117 (41%), Positives = 65/117 (55%), Gaps = 6/117 (5%)
Query: 89 LEWHEYFMASAFLVAKRSKDPVTRVGAVIVNEDNKIVGTGYNGMPIGCSD--DEFPWDKN 146
++W EYFMA + L+A RS VGA IV +DN+I+ GYNG G DE ++
Sbjct: 4 IKWEEYFMAQSHLLALRSTCQRLSVGATIV-KDNRIIAGGYNGSVAGEVHCIDEGCLIED 62
Query: 147 THDELDMCHAEMNAILN--KNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIYMCD 201
H + HAEMNA+L K T+ +Y + FPC C K IIQ+GIK + Y D
Sbjct: 63 GHC-IRTIHAEMNALLQCAKQGVSTEGATIYVTHFPCLNCTKSIIQAGIKTIYYAED 118
Score = 42.7 bits (99), Expect = 0.079, Method: Compositional matrix adjust.
Identities = 22/53 (41%), Positives = 28/53 (52%), Gaps = 2/53 (3%)
Query: 1 MNAILN--KNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIYMCDKHKQKPA 51
MNA+L K T+ +Y + FPC C K IIQ+GIK + Y D H A
Sbjct: 73 MNALLQCAKQGVSTEGATIYVTHFPCLNCTKSIIQAGIKTIYYAEDYHNHNYA 125
>gi|357637377|ref|ZP_09135252.1| putative ComE operon protein 2 [Streptococcus macacae NCTC 11558]
gi|357585831|gb|EHJ53034.1| putative ComE operon protein 2 [Streptococcus macacae NCTC 11558]
Length = 151
Score = 78.2 bits (191), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 46/116 (39%), Positives = 67/116 (57%), Gaps = 10/116 (8%)
Query: 89 LEWHEYFMASAFLVAKRSKDPVTRVGAVIVNEDNKIVGTGYNGMPIGCSDDEFPWDKNTH 148
L W +YFMA+A L++KRS VGAV+V ++N+I+ TGYNG G +D + D
Sbjct: 6 LSWQDYFMANAELISKRSTCNRAYVGAVLV-KNNRIIATGYNG---GVADTDNCDDVGHE 61
Query: 149 DELDMC----HAEMNAILN--KNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIY 198
E C HAEMNA++ K T ++Y + FPC C K ++Q+GI ++ Y
Sbjct: 62 MEDGHCIRTVHAEMNALIQCAKEGISTNNTEIYVTHFPCINCTKALLQAGINKITY 117
Score = 37.7 bits (86), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 20/60 (33%), Positives = 31/60 (51%), Gaps = 5/60 (8%)
Query: 1 MNAILN--KNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIYMCDKHKQKPATIASKRM 58
MNA++ K T ++Y + FPC C K ++Q+GI ++ Y K +P A K M
Sbjct: 75 MNALIQCAKEGISTNNTEIYVTHFPCINCTKALLQAGINKITY---KTAYRPHPFAVKLM 131
>gi|242373893|ref|ZP_04819467.1| competence protein ComEB [Staphylococcus epidermidis M23864:W1]
gi|242348447|gb|EES40049.1| competence protein ComEB [Staphylococcus epidermidis M23864:W1]
Length = 153
Score = 78.2 bits (191), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 49/117 (41%), Positives = 65/117 (55%), Gaps = 6/117 (5%)
Query: 89 LEWHEYFMASAFLVAKRSKDPVTRVGAVIVNEDNKIVGTGYNGMPIGCSD--DEFPWDKN 146
++W EYFMA + L+A RS VGA IV +DN+I+ GYNG G DE ++
Sbjct: 4 IKWEEYFMAQSHLLALRSTCQRLSVGATIV-KDNRIIAGGYNGSVAGEVHCIDEGCLIED 62
Query: 147 THDELDMCHAEMNAILN--KNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIYMCD 201
H + HAEMNA+L K T+ +Y + FPC C K IIQ+GIK + Y D
Sbjct: 63 GHC-IRTIHAEMNALLQCAKQGVSTEGATIYVTHFPCLNCTKSIIQAGIKTIYYAED 118
Score = 42.7 bits (99), Expect = 0.089, Method: Compositional matrix adjust.
Identities = 22/53 (41%), Positives = 28/53 (52%), Gaps = 2/53 (3%)
Query: 1 MNAILN--KNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIYMCDKHKQKPA 51
MNA+L K T+ +Y + FPC C K IIQ+GIK + Y D H A
Sbjct: 73 MNALLQCAKQGVSTEGATIYVTHFPCLNCTKSIIQAGIKTIYYAEDYHNHDYA 125
>gi|228476125|ref|ZP_04060833.1| ComE operon protein 2 [Staphylococcus hominis SK119]
gi|314936291|ref|ZP_07843638.1| ComE operon protein 2 [Staphylococcus hominis subsp. hominis C80]
gi|418620107|ref|ZP_13182918.1| ComE operon protein 2 [Staphylococcus hominis VCU122]
gi|228269948|gb|EEK11428.1| ComE operon protein 2 [Staphylococcus hominis SK119]
gi|313654910|gb|EFS18655.1| ComE operon protein 2 [Staphylococcus hominis subsp. hominis C80]
gi|374823670|gb|EHR87665.1| ComE operon protein 2 [Staphylococcus hominis VCU122]
Length = 154
Score = 78.2 bits (191), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 50/121 (41%), Positives = 65/121 (53%), Gaps = 10/121 (8%)
Query: 87 DVLEWHEYFMASAFLVAKRSKDPVTRVGAVIVNEDNKIVGTGYNGMPIGCSDDEFPWDKN 146
D ++W EYFMA + L+A RS VGA IV +DN+I+ GYNG G + D
Sbjct: 2 DRIKWDEYFMAQSHLLALRSTCQRLSVGATIV-KDNRIIAGGYNGSVAG---EVHCIDVG 57
Query: 147 THDELDMC----HAEMNAILN--KNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIYMC 200
E D C HAEMNA+L K + +Y + FPC C K IIQ+GIK++ Y
Sbjct: 58 CLIEDDHCIRTIHAEMNALLQCAKQGVSSDNATIYVTHFPCLNCTKSIIQAGIKKIYYAK 117
Query: 201 D 201
D
Sbjct: 118 D 118
Score = 43.9 bits (102), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 24/68 (35%), Positives = 35/68 (51%), Gaps = 6/68 (8%)
Query: 1 MNAILN--KNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIYMCDKHKQKPATIASKRM 58
MNA+L K + +Y + FPC C K IIQ+GIK++ Y D H K A ++
Sbjct: 73 MNALLQCAKQGVSSDNATIYVTHFPCLNCTKSIIQAGIKKIYYAKDYHNHKYAI----KL 128
Query: 59 FDAAKVHY 66
+ A + Y
Sbjct: 129 LNQAGIEY 136
>gi|21673576|ref|NP_661641.1| deoxycytidylate deaminase [Chlorobium tepidum TLS]
gi|21646688|gb|AAM71983.1| deoxycytidylate deaminase, putative [Chlorobium tepidum TLS]
Length = 175
Score = 78.2 bits (191), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 47/122 (38%), Positives = 65/122 (53%), Gaps = 13/122 (10%)
Query: 89 LEWHEYFMASAFLVAKRSKDPVTRVGAVIVNEDNKIVGTGYNGMPIG---CSDDEFPWDK 145
L WHEYFM A L+++R+ VGAVIV DN I+ TGYNG P G C++ +
Sbjct: 27 LGWHEYFMCVAHLISRRATCTRGHVGAVIV-RDNNILSTGYNGAPSGLPHCNETNCKIYR 85
Query: 146 NTHDE-------LDMCHAEMNAILN--KNSADTKRCKLYTSLFPCNECAKVIIQSGIKEV 196
+ H + ++ HAE+NAI K+ K +Y + PC C KV+I GIK +
Sbjct: 86 SIHPDGTVEENCVNTIHAEINAIAQAAKHGVSIKDADIYITASPCIHCLKVLINVGIKTI 145
Query: 197 IY 198
Y
Sbjct: 146 YY 147
>gi|394992042|ref|ZP_10384835.1| DNA transport protein [Bacillus sp. 916]
gi|393807058|gb|EJD68384.1| DNA transport protein [Bacillus sp. 916]
Length = 189
Score = 78.2 bits (191), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 49/118 (41%), Positives = 69/118 (58%), Gaps = 8/118 (6%)
Query: 89 LEWHEYFMASAFLVAKRSKDPVTRVGAVIVNEDNKIVGTGYNGMPIG---CSDDEFPWDK 145
+ W++YFMA + L+A RS P VGA IV D +++ GYNG G C+D+
Sbjct: 4 ISWNQYFMAQSHLLALRSTCPRLSVGATIVR-DKRMIAGGYNGSIAGGVHCADEGCLLID 62
Query: 146 NTHDELDMCHAEMNAIL--NKNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIYMCD 201
N H + + HAEMNAIL +K T+ ++Y + +PC +C K IIQ+GIK V Y D
Sbjct: 63 N-HCQRTI-HAEMNAILQCSKFGVPTEGAEIYVTHYPCIQCCKSIIQAGIKTVYYAED 118
Score = 44.3 bits (103), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 30/76 (39%), Positives = 44/76 (57%), Gaps = 7/76 (9%)
Query: 1 MNAIL--NKNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIYMCDKHKQKPATIASKRM 58
MNAIL +K T+ ++Y + +PC +C K IIQ+GIK V Y D +K +P +K +
Sbjct: 73 MNAILQCSKFGVPTEGAEIYVTHYPCIQCCKSIIQAGIKTVYYAED-YKTQP---YAKEL 128
Query: 59 FDAAKVHYWS-EMDKM 73
F A V E+D+M
Sbjct: 129 FSQAGVKVEQVELDEM 144
>gi|308516912|emb|CBW47017.1| hypothetical protein [Roseovarius sp. 217 phage 1]
Length = 143
Score = 78.2 bits (191), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 41/115 (35%), Positives = 62/115 (53%), Gaps = 1/115 (0%)
Query: 93 EYFMASAFLVAKRSKDPVTRVGAVIVNEDNKIVGTGYNGMPIGCSDDEFPWDKNTHDELD 152
E+ + A V+ RS+DP T+VGAVI+ D I GYNG P D + W+ T
Sbjct: 7 EWALGLAQAVSLRSRDPSTKVGAVIIRPDKTIASMGYNGFPRTMQDKDIWWNDRTEKYAR 66
Query: 153 MCHAEMNAILNKNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIYMCDKQMSYK 207
+ HAEMNA+LN + +LY + C CAK +I +GI+ V + +++ +
Sbjct: 67 VIHAEMNALLNAKES-VNGMQLYCTHPCCEHCAKHVIAAGIRHVHFYTSEEIRSR 120
>gi|189346358|ref|YP_001942887.1| zinc-binding CMP/dCMP deaminase [Chlorobium limicola DSM 245]
gi|189340505|gb|ACD89908.1| CMP/dCMP deaminase zinc-binding [Chlorobium limicola DSM 245]
Length = 174
Score = 78.2 bits (191), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 46/122 (37%), Positives = 67/122 (54%), Gaps = 13/122 (10%)
Query: 89 LEWHEYFMASAFLVAKRSKDPVTRVGAVIVNEDNKIVGTGYNGMPIG---CSDDEFPWDK 145
L WHEYFM+ A L+++R+ +GAVIV D+ I+ TGYNG P G C++ +
Sbjct: 26 LGWHEYFMSVAHLISRRATCTRGHIGAVIV-RDHNILSTGYNGAPSGLPHCNETNCRIYR 84
Query: 146 NTHDE-------LDMCHAEMNAILN--KNSADTKRCKLYTSLFPCNECAKVIIQSGIKEV 196
+TH + ++ HAE+NAI K+ K +Y + PC C KV+I GIK +
Sbjct: 85 STHPDGTIEENCVNTIHAEINAIAQAAKHGVSIKDADIYITASPCIHCLKVLINVGIKTI 144
Query: 197 IY 198
Y
Sbjct: 145 YY 146
>gi|417001857|ref|ZP_11941362.1| putative ComE operon protein 2 [Anaerococcus prevotii
ACS-065-V-Col13]
gi|325479743|gb|EGC82833.1| putative ComE operon protein 2 [Anaerococcus prevotii
ACS-065-V-Col13]
Length = 146
Score = 78.2 bits (191), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 51/115 (44%), Positives = 59/115 (51%), Gaps = 3/115 (2%)
Query: 87 DVLEWHEYFMASAFLVAKRSKDPVTRVGAVIVNEDNKIVGTGYNGMPIGCSD-DEFPWDK 145
D L W EYFM A VA R VG VIVNE+N+IV TGYNG G DE
Sbjct: 4 DRLSWQEYFMKLAKNVAMRGTCDRAYVGCVIVNEENRIVTTGYNGSISGNPHCDEVGHTM 63
Query: 146 NTHDELDMCHAEMNAIL--NKNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIY 198
+ HAEMNAIL K K Y + FPC C K +IQ+GIK++ Y
Sbjct: 64 RDGHCIATIHAEMNAILYCAKEGIALKDTICYVTHFPCLNCTKSLIQAGIKKIYY 118
>gi|333394702|ref|ZP_08476521.1| dCMP deaminase [Lactobacillus coryniformis subsp. coryniformis KCTC
3167]
gi|336392411|ref|ZP_08573810.1| dCMP deaminase [Lactobacillus coryniformis subsp. torquens KCTC
3535]
Length = 163
Score = 78.2 bits (191), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 47/123 (38%), Positives = 68/123 (55%), Gaps = 18/123 (14%)
Query: 89 LEWHEYFMASAFLVAKRSKDPVTRVGAVIVNEDNKIVGTGYNG--------MPIGCSDDE 140
+ W +YFM A L + RS P VGA IV D +++ +GYNG + +GC
Sbjct: 9 MPWDQYFMTQAILSSLRSTCPRATVGAAIV-RDRRVIASGYNGSVSGDDHCIDVGC---- 63
Query: 141 FPWDKNTHDELDMCHAEMNAILN--KNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIY 198
+ D + L HAEMNAIL K A T+ ++Y + FPC +C K++IQ+GIK + Y
Sbjct: 64 YIVDGHC---LRTIHAEMNAILQCAKFGAATEGAEIYVTHFPCLQCTKMLIQAGIKTINY 120
Query: 199 MCD 201
+ D
Sbjct: 121 LKD 123
Score = 45.8 bits (107), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 24/59 (40%), Positives = 36/59 (61%), Gaps = 2/59 (3%)
Query: 1 MNAILN--KNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIYMCDKHKQKPATIASKR 57
MNAIL K A T+ ++Y + FPC +C K++IQ+GIK + Y+ D H + A K+
Sbjct: 78 MNAILQCAKFGAATEGAEIYVTHFPCLQCTKMLIQAGIKTINYLKDYHDDEYAQALIKK 136
>gi|254441742|ref|ZP_05055235.1| Cytidine and deoxycytidylate deaminase zinc-binding region domain
protein [Octadecabacter antarcticus 307]
gi|198251820|gb|EDY76135.1| Cytidine and deoxycytidylate deaminase zinc-binding region domain
protein [Octadecabacter antarcticus 307]
Length = 182
Score = 78.2 bits (191), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 45/123 (36%), Positives = 64/123 (52%), Gaps = 13/123 (10%)
Query: 82 HKRVDDVLEWHEYFMASAFLVAKRSKDPVTRVGAVIVNEDNKIVGTGYNGMPIGCSDDEF 141
H D + W F + +A S+D +VG VIV+++N I+ TGYNG P D
Sbjct: 26 HVTEDTITNWDRRFFQLSNTIAGWSEDQSRKVGCVIVSQENGILSTGYNGFPREVLD--- 82
Query: 142 PWDKNTHDELD------MCHAEMNAILN--KNSADTKRCKLYTSLFPCNECAKVIIQSGI 193
+ H LD HAE NAI N ++ + +LY +LFPC +C + IIQSG+
Sbjct: 83 --KPDRHSSLDGEKYYWFEHAERNAIYNAVRSGSALLNSRLYVNLFPCADCTRAIIQSGV 140
Query: 194 KEV 196
KE+
Sbjct: 141 KEL 143
Score = 41.2 bits (95), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 19/50 (38%), Positives = 29/50 (58%), Gaps = 2/50 (4%)
Query: 2 NAILN--KNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIYMCDKHKQK 49
NAI N ++ + +LY +LFPC +C + IIQSG+KE+ +K
Sbjct: 104 NAIYNAVRSGSALLNSRLYVNLFPCADCTRAIIQSGVKELNTFAPDQNEK 153
>gi|227524104|ref|ZP_03954153.1| competence protein ComEB [Lactobacillus hilgardii ATCC 8290]
gi|227088735|gb|EEI24047.1| competence protein ComEB [Lactobacillus hilgardii ATCC 8290]
Length = 167
Score = 78.2 bits (191), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 46/123 (37%), Positives = 70/123 (56%), Gaps = 10/123 (8%)
Query: 83 KRVDDVLEWHEYFMASAFLVAKRSKDPVTRVGAVIVNEDNKIVGTGYNGMPIGCSDDEFP 142
+++D+ ++W +YFM A L+A RS VGAVIV D +I+ GYNG +G D+
Sbjct: 8 EKMDNRIKWDQYFMMQAVLLASRSTCERLSVGAVIV-RDKRIIAGGYNGSVVG---DDHC 63
Query: 143 WDKNTHDELDMC----HAEMNAILN--KNSADTKRCKLYTSLFPCNECAKVIIQSGIKEV 196
D + C HAEMNAIL K T ++Y + FPC +C K+++Q+GI+ +
Sbjct: 64 IDVGCYLVDGHCVRTIHAEMNAILQCAKFGESTDNAEIYVTDFPCLQCTKMLLQAGIRRI 123
Query: 197 IYM 199
Y+
Sbjct: 124 NYL 126
Score = 40.8 bits (94), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 19/53 (35%), Positives = 32/53 (60%), Gaps = 2/53 (3%)
Query: 1 MNAILN--KNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIYMCDKHKQKPA 51
MNAIL K T ++Y + FPC +C K+++Q+GI+ + Y+ + H + A
Sbjct: 83 MNAILQCAKFGESTDNAEIYVTDFPCLQCTKMLLQAGIRRINYLRNYHNDEYA 135
>gi|209809706|ref|YP_002265245.1| putative cytidine and deoxycytidylate deaminase [Aliivibrio
salmonicida LFI1238]
gi|21311445|gb|AAM46726.1|AF452135_11 RibG [Aliivibrio salmonicida]
gi|208011269|emb|CAQ81710.1| putative cytidine and deoxycytidylate deaminase [Aliivibrio
salmonicida LFI1238]
Length = 147
Score = 78.2 bits (191), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 48/109 (44%), Positives = 59/109 (54%), Gaps = 3/109 (2%)
Query: 88 VLEWHEYFMASAFLVAKRSKDPVTRVGAVIVNEDNKIVGTGYNGMPIGCSDDEFPWDKNT 147
V +W + F A LV SKDP T+VGAVI N+IV G+NG P G SD D
Sbjct: 2 VSKWAKRFFQMAELVGSWSKDPSTQVGAVITKH-NRIVSVGFNGYPHGVSDSADT-DDRE 59
Query: 148 HDELDMCHAEMNAILNKNSADTKRCKLYTSLFPCNECAKVIIQSGIKEV 196
L HAE NAIL D + C ++ + FPC CA IIQ+GI +V
Sbjct: 60 LKYLKTLHAEENAILFAKR-DLEDCDIWVTHFPCPNCAAKIIQTGISKV 107
>gi|420146861|ref|ZP_14654215.1| DCMP deaminase [Lactobacillus coryniformis subsp. coryniformis CECT
5711]
gi|398399755|gb|EJN53374.1| DCMP deaminase [Lactobacillus coryniformis subsp. coryniformis CECT
5711]
Length = 163
Score = 77.8 bits (190), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 47/119 (39%), Positives = 66/119 (55%), Gaps = 10/119 (8%)
Query: 89 LEWHEYFMASAFLVAKRSKDPVTRVGAVIVNEDNKIVGTGYNGMPIGCSDDEFPWDKNTH 148
+ W +YFM A L + RS P VGA IV D +++ +GYNG S D+ D +
Sbjct: 9 MPWDQYFMTQAILSSLRSTCPRATVGAAIV-RDRRVIASGYNG---SVSGDDHCIDVGCY 64
Query: 149 DELDMC----HAEMNAILN--KNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIYMCD 201
C HAEMNAIL K A T+ ++Y + FPC +C K++IQ+GIK + Y+ D
Sbjct: 65 IVDGHCLRTIHAEMNAILQCAKFGAATEGAEIYVTHFPCLQCTKMLIQAGIKTINYLKD 123
Score = 45.8 bits (107), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 24/59 (40%), Positives = 36/59 (61%), Gaps = 2/59 (3%)
Query: 1 MNAILN--KNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIYMCDKHKQKPATIASKR 57
MNAIL K A T+ ++Y + FPC +C K++IQ+GIK + Y+ D H + A K+
Sbjct: 78 MNAILQCAKFGAATEGAEIYVTHFPCLQCTKMLIQAGIKTINYLKDYHDDEYAQALIKK 136
>gi|342216916|ref|ZP_08709563.1| putative ComE operon protein 2 [Peptoniphilus sp. oral taxon 375
str. F0436]
gi|341587806|gb|EGS31206.1| putative ComE operon protein 2 [Peptoniphilus sp. oral taxon 375
str. F0436]
Length = 145
Score = 77.8 bits (190), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 47/113 (41%), Positives = 62/113 (54%), Gaps = 7/113 (6%)
Query: 91 WHEYFMASAFLVAKRSKDPVTRVGAVIVNEDNKIVGTGYNGMPIG---CSDDEFPWDKNT 147
W+EYFM +VA RS VG V+VN+D++IV TGYNG G CS E
Sbjct: 5 WNEYFMEITEMVASRSTCDRAFVGCVLVNKDHRIVSTGYNGSVAGNPHCS--EVGHTMRD 62
Query: 148 HDELDMCHAEMNAIL--NKNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIY 198
+ HAEMNA+L K K C Y + FPC C+K +IQ+GI+++ Y
Sbjct: 63 GHCIATIHAEMNALLYCAKEGIPVKGCTAYVTHFPCLNCSKALIQAGIEKIYY 115
Score = 38.9 bits (89), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 18/43 (41%), Positives = 26/43 (60%), Gaps = 2/43 (4%)
Query: 1 MNAIL--NKNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIY 41
MNA+L K K C Y + FPC C+K +IQ+GI+++ Y
Sbjct: 73 MNALLYCAKEGIPVKGCTAYVTHFPCLNCSKALIQAGIEKIYY 115
>gi|256544495|ref|ZP_05471868.1| cytidine/deoxycytidylate deaminase family protein [Anaerococcus
vaginalis ATCC 51170]
gi|256399820|gb|EEU13424.1| cytidine/deoxycytidylate deaminase family protein [Anaerococcus
vaginalis ATCC 51170]
Length = 146
Score = 77.8 bits (190), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 48/121 (39%), Positives = 63/121 (52%), Gaps = 3/121 (2%)
Query: 87 DVLEWHEYFMASAFLVAKRSKDPVTRVGAVIVNEDNKIVGTGYNGMPIGCSD-DEFPWDK 145
D L W+EYF+ A +VA R VG V+VN +N+I+ TGYNG G DE
Sbjct: 4 DRLTWNEYFIKLAHMVALRGTCDRAYVGCVLVNGENRIISTGYNGSIKGNPHCDEVGHTM 63
Query: 146 NTHDELDMCHAEMNAIL--NKNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIYMCDKQ 203
+ HAEMNA+L K K Y + FPC C K +IQ+GIKE+ Y D +
Sbjct: 64 RDGHCIATIHAEMNALLYCAKEGIPVKNSICYVTHFPCLNCTKSLIQAGIKEIYYSNDYR 123
Query: 204 M 204
+
Sbjct: 124 I 124
Score = 36.6 bits (83), Expect = 6.8, Method: Compositional matrix adjust.
Identities = 20/46 (43%), Positives = 25/46 (54%), Gaps = 2/46 (4%)
Query: 1 MNAIL--NKNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIYMCD 44
MNA+L K K Y + FPC C K +IQ+GIKE+ Y D
Sbjct: 76 MNALLYCAKEGIPVKNSICYVTHFPCLNCTKSLIQAGIKEIYYSND 121
>gi|465877|sp|P33968.1|YLXG_VIBFI RecName: Full=Uncharacterized deaminase in luxG 3'region
gi|396216|emb|CAA49769.1| unnamed protein product [Aliivibrio fischeri]
gi|119116595|dbj|BAF40863.1| putative deoxycytidylate deaminase [Vibrio fischeri]
Length = 147
Score = 77.8 bits (190), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 47/109 (43%), Positives = 61/109 (55%), Gaps = 3/109 (2%)
Query: 88 VLEWHEYFMASAFLVAKRSKDPVTRVGAVIVNEDNKIVGTGYNGMPIGCSDDEFPWDKNT 147
+ +W + F A LV SKDP T+VGAVI + N+IV G+NG P G SD D+
Sbjct: 2 ISKWAKRFFQMAELVGSWSKDPSTQVGAVI-TKHNRIVSVGFNGYPHGVSDSADT-DERE 59
Query: 148 HDELDMCHAEMNAILNKNSADTKRCKLYTSLFPCNECAKVIIQSGIKEV 196
L HAE NAIL D + C ++ + FPC CA IIQ+GI +V
Sbjct: 60 IKYLKTLHAEENAILFAKR-DLEGCDIWVTHFPCPNCAAKIIQTGISKV 107
>gi|423688180|ref|ZP_17662983.1| RibG [Vibrio fischeri SR5]
gi|371492683|gb|EHN68289.1| RibG [Vibrio fischeri SR5]
Length = 147
Score = 77.8 bits (190), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 47/109 (43%), Positives = 60/109 (55%), Gaps = 3/109 (2%)
Query: 88 VLEWHEYFMASAFLVAKRSKDPVTRVGAVIVNEDNKIVGTGYNGMPIGCSDDEFPWDKNT 147
+ +W + F A LV SKDP T+VGAVI N+IV G+NG P G SD D+
Sbjct: 2 ISKWAKRFFQMAELVGSWSKDPSTQVGAVITKH-NRIVSVGFNGYPHGVSDSADT-DERE 59
Query: 148 HDELDMCHAEMNAILNKNSADTKRCKLYTSLFPCNECAKVIIQSGIKEV 196
L HAE NAIL D + C ++ + FPC CA IIQ+GI +V
Sbjct: 60 IKYLKTLHAEENAILFAKR-DLEGCDIWVTHFPCPNCAAKIIQTGISKV 107
>gi|238855583|ref|ZP_04645885.1| ComE operon protein 2 [Lactobacillus jensenii 269-3]
gi|260664775|ref|ZP_05865626.1| ComE operon protein 2 [Lactobacillus jensenii SJ-7A-US]
gi|313472663|ref|ZP_07813152.1| ComE operon protein 2 [Lactobacillus jensenii 1153]
gi|238831800|gb|EEQ24135.1| ComE operon protein 2 [Lactobacillus jensenii 269-3]
gi|239529376|gb|EEQ68377.1| ComE operon protein 2 [Lactobacillus jensenii 1153]
gi|260561258|gb|EEX27231.1| ComE operon protein 2 [Lactobacillus jensenii SJ-7A-US]
Length = 160
Score = 77.8 bits (190), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 44/120 (36%), Positives = 65/120 (54%), Gaps = 12/120 (10%)
Query: 89 LEWHEYFMASAFLVAKRSKDPVTRVGAVIVNEDNKIVGTGYNGMPIGCSDDEFPWDKNTH 148
+ W +YFM A ++++RS VG+V+V +D +I+GTGYNG G + D H
Sbjct: 6 IPWEQYFMMQALVISQRSTCNRALVGSVLV-KDKRIIGTGYNGSVTG----QAHCDDVGH 60
Query: 149 DELD-----MCHAEMNAILN--KNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIYMCD 201
+D H+EMN ++ KN T ++Y + FPC C K +IQ+GIK V Y D
Sbjct: 61 QMVDGHCVRTIHSEMNTLIQCAKNGVSTLNTEIYVTHFPCYNCTKALIQAGIKRVNYFFD 120
Score = 40.8 bits (94), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 20/55 (36%), Positives = 30/55 (54%), Gaps = 3/55 (5%)
Query: 1 MNAILN--KNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIYMCDKHKQKPATI 53
MN ++ KN T ++Y + FPC C K +IQ+GIK V Y D ++ P +
Sbjct: 75 MNTLIQCAKNGVSTLNTEIYVTHFPCYNCTKALIQAGIKRVNYFFD-YRDNPLAV 128
>gi|59714100|ref|YP_206875.1| deoxycytidylate deaminase [Vibrio fischeri ES114]
gi|197337866|ref|YP_002158583.1| RibG [Vibrio fischeri MJ11]
gi|59482348|gb|AAW87987.1| deoxycytidylate deaminase [Vibrio fischeri ES114]
gi|197315118|gb|ACH64567.1| RibG [Vibrio fischeri MJ11]
Length = 147
Score = 77.8 bits (190), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 47/109 (43%), Positives = 60/109 (55%), Gaps = 3/109 (2%)
Query: 88 VLEWHEYFMASAFLVAKRSKDPVTRVGAVIVNEDNKIVGTGYNGMPIGCSDDEFPWDKNT 147
+ +W + F A LV SKDP T+VGAVI N+IV G+NG P G SD D+
Sbjct: 2 ISKWAKRFFQMAELVGSWSKDPSTQVGAVITKH-NRIVSVGFNGYPHGVSDSADT-DERE 59
Query: 148 HDELDMCHAEMNAILNKNSADTKRCKLYTSLFPCNECAKVIIQSGIKEV 196
L HAE NAIL D + C ++ + FPC CA IIQ+GI +V
Sbjct: 60 IKYLKTLHAEENAILFAKR-DLEGCDIWVTHFPCPNCAAKIIQTGISKV 107
>gi|390933439|ref|YP_006390944.1| CMP/dCMP deaminase zinc-binding protein [Thermoanaerobacterium
saccharolyticum JW/SL-YS485]
gi|389568940|gb|AFK85345.1| CMP/dCMP deaminase zinc-binding protein [Thermoanaerobacterium
saccharolyticum JW/SL-YS485]
Length = 148
Score = 77.8 bits (190), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 50/122 (40%), Positives = 62/122 (50%), Gaps = 12/122 (9%)
Query: 91 WHEYFMASAFLVAKRSKDPVTRVGAVIVNEDNKIVGTGYNGMP--------IGCSDDEFP 142
W EYFM +V RS +VGAVIV +D I+ TGYNG P +GC +
Sbjct: 5 WDEYFMMVVDVVKTRSTCLRRQVGAVIV-KDKHIISTGYNGAPTGLKHCEEVGCMRESLN 63
Query: 143 WDKNTHDEL-DMCHAEMNAILNK--NSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIYM 199
EL HAE NAI+ N TK +Y S PC+ CAK+II +GIK V+Y
Sbjct: 64 IPSGERHELCRGTHAEQNAIIQAALNGVSTKDATIYISASPCSMCAKMIINAGIKRVVYE 123
Query: 200 CD 201
D
Sbjct: 124 GD 125
Score = 41.2 bits (95), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 21/45 (46%), Positives = 27/45 (60%), Gaps = 2/45 (4%)
Query: 2 NAILNK--NSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIYMCD 44
NAI+ N TK +Y S PC+ CAK+II +GIK V+Y D
Sbjct: 81 NAIIQAALNGVSTKDATIYISASPCSMCAKMIINAGIKRVVYEGD 125
>gi|225869190|ref|YP_002745138.1| cytidine and deoxycytidylate deaminase [Streptococcus equi subsp.
zooepidemicus]
gi|225869858|ref|YP_002745805.1| cytidine and deoxycytidylate deaminase [Streptococcus equi subsp.
equi 4047]
gi|414563298|ref|YP_006042259.1| cytidine and deoxycytidylate deaminase [Streptococcus equi subsp.
zooepidemicus ATCC 35246]
gi|225699262|emb|CAW92581.1| putative cytidine and deoxycytidylate deaminase [Streptococcus equi
subsp. equi 4047]
gi|225702466|emb|CAX00368.1| putative cytidine and deoxycytidylate deaminase [Streptococcus equi
subsp. zooepidemicus]
gi|338846363|gb|AEJ24575.1| cytidine and deoxycytidylate deaminase [Streptococcus equi subsp.
zooepidemicus ATCC 35246]
Length = 153
Score = 77.8 bits (190), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 47/118 (39%), Positives = 68/118 (57%), Gaps = 10/118 (8%)
Query: 87 DVLEWHEYFMASAFLVAKRSKDPVTRVGAVIVNEDNKIVGTGYNGMPIGCSDDEFPWDKN 146
D L W +YFMA+A L++KRS VGAV+V +DN+I+ TGYNG G S + +
Sbjct: 3 DRLSWQDYFMANAELISKRSTCDRAFVGAVLV-KDNRIIATGYNG---GVSATDNCNEAG 58
Query: 147 THDELDMC----HAEMNAILN--KNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIY 198
+ E C HAEMNA++ K T ++Y + FPC C K ++Q+GI ++ Y
Sbjct: 59 HYMEEGHCIRTVHAEMNALIQCAKEGISTAGTEIYVTHFPCINCTKALLQAGICKITY 116
>gi|450145119|ref|ZP_21874419.1| putative deoxycytidylate deaminase [Streptococcus mutans 1ID3]
gi|449149722|gb|EMB53512.1| putative deoxycytidylate deaminase [Streptococcus mutans 1ID3]
Length = 150
Score = 77.8 bits (190), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 45/116 (38%), Positives = 67/116 (57%), Gaps = 10/116 (8%)
Query: 89 LEWHEYFMASAFLVAKRSKDPVTRVGAVIVNEDNKIVGTGYNGMPIGCSDDEFPWDKNTH 148
L W +YFMA+A L++KRS VGAV+V ++N+I+ TGYNG G +D + D
Sbjct: 5 LSWQDYFMANAELISKRSTCNRAYVGAVLV-KNNRIIATGYNG---GVADTDNCDDVGHE 60
Query: 149 DELDMC----HAEMNAILN--KNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIY 198
E C HAEMNA++ K ++Y + FPC C K ++Q+G+K++ Y
Sbjct: 61 MEDGHCIRTVHAEMNALIQCAKEGISANNTEIYVTHFPCINCTKALLQAGVKKITY 116
>gi|311069161|ref|YP_003974084.1| hypothetical protein BATR1942_11110 [Bacillus atrophaeus 1942]
gi|419820189|ref|ZP_14343802.1| hypothetical protein UY9_02216 [Bacillus atrophaeus C89]
gi|310869678|gb|ADP33153.1| hypothetical protein BATR1942_11110 [Bacillus atrophaeus 1942]
gi|388475701|gb|EIM12411.1| hypothetical protein UY9_02216 [Bacillus atrophaeus C89]
Length = 189
Score = 77.8 bits (190), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 48/119 (40%), Positives = 69/119 (57%), Gaps = 10/119 (8%)
Query: 89 LEWHEYFMASAFLVAKRSKDPVTRVGAVIVNEDNKIVGTGYNGMPIG---CSDDE-FPWD 144
+ W++YFMA + L+A RS P VGA IV D +++ GYNG G C+D+ F D
Sbjct: 4 ISWNQYFMAQSHLLALRSTCPRLSVGATIVR-DKRMIAGGYNGSIAGGVHCADEGCFLID 62
Query: 145 KNTHDELDMCHAEMNAIL--NKNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIYMCD 201
+ + HAEMNAIL +K T+ ++Y + +PC +C K IIQ+GIK V + D
Sbjct: 63 DHCARTI---HAEMNAILQCSKFGVPTEGAEIYVTHYPCIQCCKSIIQAGIKTVYFAED 118
Score = 43.5 bits (101), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 26/66 (39%), Positives = 39/66 (59%), Gaps = 6/66 (9%)
Query: 1 MNAIL--NKNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIYMCDKHKQKPATIASKRM 58
MNAIL +K T+ ++Y + +PC +C K IIQ+GIK V Y + +K P +K +
Sbjct: 73 MNAILQCSKFGVPTEGAEIYVTHYPCIQCCKSIIQAGIKTV-YFAEDYKTHP---YAKEL 128
Query: 59 FDAAKV 64
F+ A V
Sbjct: 129 FEQAGV 134
>gi|374340530|ref|YP_005097266.1| deoxycytidylate deaminase [Marinitoga piezophila KA3]
gi|372102064|gb|AEX85968.1| deoxycytidylate deaminase [Marinitoga piezophila KA3]
Length = 173
Score = 77.8 bits (190), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 51/132 (38%), Positives = 71/132 (53%), Gaps = 14/132 (10%)
Query: 81 PHKRVDDVLEWHEYFMASAFLVAKRSKDPVTRVGAVIVNEDNKIVGTGYNGMPIG----- 135
P K+ ++ +W YFM AFLV++RS +VGAVIV +D +++ TGYN P G
Sbjct: 22 PEKK--NIEDWDIYFMKIAFLVSERSSCTHRKVGAVIV-KDKRVLATGYNQPPSGFPHCD 78
Query: 136 ---CSDDEFPWDKNTHDEL-DMCHAEMNAILN--KNSADTKRCKLYTSLFPCNECAKVII 189
C DE H E+ HAE NA++ K T +Y + PC+ CA++II
Sbjct: 79 QITCIRDELNIKSGEHQEICYGLHAEQNALMQAAKFGISTDGATIYVTHQPCSVCARLII 138
Query: 190 QSGIKEVIYMCD 201
+GIK VIY D
Sbjct: 139 NAGIKRVIYGGD 150
>gi|212697211|ref|ZP_03305339.1| hypothetical protein ANHYDRO_01779 [Anaerococcus hydrogenalis DSM
7454]
gi|212675660|gb|EEB35267.1| hypothetical protein ANHYDRO_01779 [Anaerococcus hydrogenalis DSM
7454]
Length = 146
Score = 77.8 bits (190), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 46/121 (38%), Positives = 63/121 (52%), Gaps = 3/121 (2%)
Query: 87 DVLEWHEYFMASAFLVAKRSKDPVTRVGAVIVNEDNKIVGTGYNGMPIGCSD-DEFPWDK 145
D L W+EYF+ A +VA R VG V+VN +N+I+ TGYNG G DE
Sbjct: 4 DRLTWNEYFIKLAHMVALRGTCDRAYVGCVLVNNENRIISTGYNGSIKGNPHCDEVGHTM 63
Query: 146 NTHDELDMCHAEMNAIL--NKNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIYMCDKQ 203
+ HAEMNA+L K K Y + FPC C K +IQ+G++E+ Y D +
Sbjct: 64 RDGHCIATIHAEMNALLYCAKEGISVKNSICYVTHFPCLNCTKSLIQAGVREIYYTNDYR 123
Query: 204 M 204
+
Sbjct: 124 V 124
Score = 36.2 bits (82), Expect = 9.1, Method: Compositional matrix adjust.
Identities = 20/55 (36%), Positives = 29/55 (52%), Gaps = 3/55 (5%)
Query: 1 MNAIL--NKNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIYMCDKHKQKPATI 53
MNA+L K K Y + FPC C K +IQ+G++E+ Y D ++ P I
Sbjct: 76 MNALLYCAKEGISVKNSICYVTHFPCLNCTKSLIQAGVREIYYTND-YRVDPYAI 129
>gi|195977496|ref|YP_002122740.1| dCMP deaminase; late competence protein ComEB [Streptococcus equi
subsp. zooepidemicus MGCS10565]
gi|195974201|gb|ACG61727.1| dCMP deaminase; late competence protein ComEB [Streptococcus equi
subsp. zooepidemicus MGCS10565]
Length = 153
Score = 77.8 bits (190), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 47/118 (39%), Positives = 68/118 (57%), Gaps = 10/118 (8%)
Query: 87 DVLEWHEYFMASAFLVAKRSKDPVTRVGAVIVNEDNKIVGTGYNGMPIGCSDDEFPWDKN 146
D L W +YFMA+A L++KRS VGAV+V +DN+I+ TGYNG G S + +
Sbjct: 3 DRLSWQDYFMANAELISKRSTCDRAFVGAVLV-KDNRIIATGYNG---GVSATDNCNEAG 58
Query: 147 THDELDMC----HAEMNAILN--KNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIY 198
+ E C HAEMNA++ K T ++Y + FPC C K ++Q+GI ++ Y
Sbjct: 59 HYMEEGHCIRTVHAEMNALIQCAKEGISTAGTEIYVTHFPCINCTKALLQAGICKITY 116
>gi|154686818|ref|YP_001421979.1| hypothetical protein RBAM_023880 [Bacillus amyloliquefaciens FZB42]
gi|308174347|ref|YP_003921052.1| DNA transport protein [Bacillus amyloliquefaciens DSM 7]
gi|375363091|ref|YP_005131130.1| Cytidine deaminase [Bacillus amyloliquefaciens subsp. plantarum CAU
B946]
gi|384266170|ref|YP_005421877.1| comE operon protein B [Bacillus amyloliquefaciens subsp. plantarum
YAU B9601-Y2]
gi|387899191|ref|YP_006329487.1| dCMP deaminase [Bacillus amyloliquefaciens Y2]
gi|421730923|ref|ZP_16170049.1| dCMP deaminase [Bacillus amyloliquefaciens subsp. plantarum M27]
gi|429505967|ref|YP_007187151.1| dCMP deaminase [Bacillus amyloliquefaciens subsp. plantarum AS43.3]
gi|451346236|ref|YP_007444867.1| dCMP deaminase [Bacillus amyloliquefaciens IT-45]
gi|452856321|ref|YP_007498004.1| putative enzyme associated to DNA transport (competence) [Bacillus
amyloliquefaciens subsp. plantarum UCMB5036]
gi|154352669|gb|ABS74748.1| ComEB [Bacillus amyloliquefaciens FZB42]
gi|307607211|emb|CBI43582.1| putative enzyme associated to DNA transport (competence) [Bacillus
amyloliquefaciens DSM 7]
gi|371569085|emb|CCF05935.1| Cytidine deaminase [Bacillus amyloliquefaciens subsp. plantarum CAU
B946]
gi|380499523|emb|CCG50561.1| comE operon protein B [Bacillus amyloliquefaciens subsp. plantarum
YAU B9601-Y2]
gi|387173301|gb|AFJ62762.1| dCMP deaminase [Bacillus amyloliquefaciens Y2]
gi|407075077|gb|EKE48064.1| dCMP deaminase [Bacillus amyloliquefaciens subsp. plantarum M27]
gi|429487557|gb|AFZ91481.1| dCMP deaminase [Bacillus amyloliquefaciens subsp. plantarum AS43.3]
gi|449849994|gb|AGF26986.1| dCMP deaminase [Bacillus amyloliquefaciens IT-45]
gi|452080581|emb|CCP22344.1| putative enzyme associated to DNA transport (competence) [Bacillus
amyloliquefaciens subsp. plantarum UCMB5036]
Length = 189
Score = 77.8 bits (190), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 48/118 (40%), Positives = 69/118 (58%), Gaps = 8/118 (6%)
Query: 89 LEWHEYFMASAFLVAKRSKDPVTRVGAVIVNEDNKIVGTGYNGMPIG---CSDDEFPWDK 145
+ W++YFMA + L+A RS P VGA +V D +++ GYNG G C+D+
Sbjct: 4 ISWNQYFMAQSHLLALRSTCPRLSVGATVVR-DKRMIAGGYNGSIAGGVHCADEGCLLID 62
Query: 146 NTHDELDMCHAEMNAIL--NKNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIYMCD 201
N H + + HAEMNAIL +K T+ ++Y + +PC +C K IIQ+GIK V Y D
Sbjct: 63 N-HCQRTI-HAEMNAILQCSKFGVPTEGAEIYVTHYPCIQCCKSIIQAGIKTVYYAED 118
Score = 44.3 bits (103), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 30/76 (39%), Positives = 44/76 (57%), Gaps = 7/76 (9%)
Query: 1 MNAIL--NKNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIYMCDKHKQKPATIASKRM 58
MNAIL +K T+ ++Y + +PC +C K IIQ+GIK V Y D +K +P +K +
Sbjct: 73 MNAILQCSKFGVPTEGAEIYVTHYPCIQCCKSIIQAGIKTVYYAED-YKTQP---YAKEL 128
Query: 59 FDAAKVHYWS-EMDKM 73
F A V E+D+M
Sbjct: 129 FSQAGVKVEQVELDEM 144
>gi|449877515|ref|ZP_21783265.1| putative deoxycytidylate deaminase [Streptococcus mutans S1B]
gi|449887253|ref|ZP_21786697.1| putative deoxycytidylate deaminase [Streptococcus mutans SA41]
gi|449904202|ref|ZP_21792558.1| putative deoxycytidylate deaminase [Streptococcus mutans M230]
gi|449914425|ref|ZP_21795619.1| putative deoxycytidylate deaminase [Streptococcus mutans 15JP3]
gi|449996571|ref|ZP_21823611.1| putative deoxycytidylate deaminase [Streptococcus mutans A9]
gi|450006978|ref|ZP_21827521.1| putative deoxycytidylate deaminase [Streptococcus mutans NMT4863]
gi|450041752|ref|ZP_21837492.1| putative deoxycytidylate deaminase [Streptococcus mutans T4]
gi|450062644|ref|ZP_21844455.1| putative deoxycytidylate deaminase [Streptococcus mutans NLML5]
gi|450076531|ref|ZP_21849871.1| putative deoxycytidylate deaminase [Streptococcus mutans N3209]
gi|450088679|ref|ZP_21854890.1| putative deoxycytidylate deaminase [Streptococcus mutans NV1996]
gi|450107758|ref|ZP_21861173.1| putative deoxycytidylate deaminase [Streptococcus mutans SF14]
gi|450131208|ref|ZP_21869342.1| putative deoxycytidylate deaminase [Streptococcus mutans NLML8]
gi|449154036|gb|EMB57656.1| putative deoxycytidylate deaminase [Streptococcus mutans NLML8]
gi|449158014|gb|EMB61443.1| putative deoxycytidylate deaminase [Streptococcus mutans 15JP3]
gi|449182913|gb|EMB84916.1| putative deoxycytidylate deaminase [Streptococcus mutans A9]
gi|449186986|gb|EMB88788.1| putative deoxycytidylate deaminase [Streptococcus mutans NMT4863]
gi|449197460|gb|EMB98633.1| putative deoxycytidylate deaminase [Streptococcus mutans T4]
gi|449205538|gb|EMC06283.1| putative deoxycytidylate deaminase [Streptococcus mutans NLML5]
gi|449212481|gb|EMC12847.1| putative deoxycytidylate deaminase [Streptococcus mutans N3209]
gi|449216332|gb|EMC16460.1| putative deoxycytidylate deaminase [Streptococcus mutans NV1996]
gi|449221437|gb|EMC21213.1| putative deoxycytidylate deaminase [Streptococcus mutans SF14]
gi|449250826|gb|EMC48870.1| putative deoxycytidylate deaminase [Streptococcus mutans S1B]
gi|449253212|gb|EMC51174.1| putative deoxycytidylate deaminase [Streptococcus mutans SA41]
gi|449259686|gb|EMC57207.1| putative deoxycytidylate deaminase [Streptococcus mutans M230]
Length = 150
Score = 77.4 bits (189), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 45/116 (38%), Positives = 67/116 (57%), Gaps = 10/116 (8%)
Query: 89 LEWHEYFMASAFLVAKRSKDPVTRVGAVIVNEDNKIVGTGYNGMPIGCSDDEFPWDKNTH 148
L W +YFMA+A L++KRS VGAV+V ++N+I+ TGYNG G +D + D
Sbjct: 5 LSWQDYFMANAELISKRSTCNRAYVGAVLV-KNNRIIATGYNG---GVADTDNCDDVGHE 60
Query: 149 DELDMC----HAEMNAILN--KNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIY 198
E C HAEMNA++ K ++Y + FPC C K ++Q+G+K++ Y
Sbjct: 61 MEDGHCIRTVHAEMNALIQCAKEGISANNTEIYVTHFPCINCTKALLQAGVKKITY 116
>gi|319651626|ref|ZP_08005753.1| ComEB protein [Bacillus sp. 2_A_57_CT2]
gi|317396693|gb|EFV77404.1| ComEB protein [Bacillus sp. 2_A_57_CT2]
Length = 187
Score = 77.4 bits (189), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 50/119 (42%), Positives = 65/119 (54%), Gaps = 6/119 (5%)
Query: 87 DVLEWHEYFMASAFLVAKRSKDPVTRVGAVIVNEDNKIVGTGYNGMPIGCSD--DEFPWD 144
D + W++YFMA + L+A RS VGA IV D +I+ GYNG G DE +
Sbjct: 2 DRISWNQYFMAQSHLLALRSTCTRLAVGATIVR-DKRIIAGGYNGSIAGGEHCIDEGCYV 60
Query: 145 KNTHDELDMCHAEMNAILN--KNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIYMCD 201
+ H + HAEMNAIL K T ++Y + FPC +C K IIQ+GIK V Y D
Sbjct: 61 IDNHC-VRTIHAEMNAILQCAKFGVPTTDAEIYVTHFPCLQCCKAIIQAGIKTVYYAQD 118
Score = 43.5 bits (101), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 28/66 (42%), Positives = 36/66 (54%), Gaps = 6/66 (9%)
Query: 1 MNAILN--KNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIYMCDKHKQKPATIASKRM 58
MNAIL K T ++Y + FPC +C K IIQ+GIK V Y D +K P I +
Sbjct: 73 MNAILQCAKFGVPTTDAEIYVTHFPCLQCCKAIIQAGIKTVYYAQD-YKNHPYGI---EL 128
Query: 59 FDAAKV 64
F+ A V
Sbjct: 129 FEKAGV 134
>gi|290579815|ref|YP_003484207.1| deoxycytidylate deaminase [Streptococcus mutans NN2025]
gi|254996714|dbj|BAH87315.1| putative deoxycytidylate deaminase [Streptococcus mutans NN2025]
Length = 150
Score = 77.4 bits (189), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 45/116 (38%), Positives = 67/116 (57%), Gaps = 10/116 (8%)
Query: 89 LEWHEYFMASAFLVAKRSKDPVTRVGAVIVNEDNKIVGTGYNGMPIGCSDDEFPWDKNTH 148
L W +YFMA+A L++KRS VGAV+V ++N+I+ TGYNG G +D + D
Sbjct: 5 LSWQDYFMANAELISKRSTCNRAYVGAVLV-KNNRIIATGYNG---GVADTDNCDDVGHE 60
Query: 149 DELDMC----HAEMNAILN--KNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIY 198
E C HAEMNA++ K ++Y + FPC C K ++Q+G+K++ Y
Sbjct: 61 MEDGHCIRTVHAEMNALIQCAKEGISANNTEIYVTHFPCINCTKALLQAGVKKITY 116
>gi|433444342|ref|ZP_20409261.1| late competence protein ComEB [Anoxybacillus flavithermus
TNO-09.006]
gi|432001634|gb|ELK22507.1| late competence protein ComEB [Anoxybacillus flavithermus
TNO-09.006]
Length = 155
Score = 77.4 bits (189), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 50/117 (42%), Positives = 65/117 (55%), Gaps = 6/117 (5%)
Query: 89 LEWHEYFMASAFLVAKRSKDPVTRVGAVIVNEDNKIVGTGYNGMPIGCSD--DEFPWDKN 146
+ W +YFMA + L+A RS VGA IV D +I+ GYNG G + DE + +
Sbjct: 4 ITWDQYFMAQSHLLALRSTCTRLAVGATIV-RDKRIIAGGYNGSIAGGAHCIDEGCYVID 62
Query: 147 THDELDMCHAEMNAILN--KNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIYMCD 201
H + HAEMNAIL K T+ ++Y + FPC +C K IIQSGIK V Y D
Sbjct: 63 NHC-VRTIHAEMNAILQCAKFGVPTEGAEIYVTHFPCLQCCKAIIQSGIKAVYYAND 118
Score = 45.4 bits (106), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 28/66 (42%), Positives = 38/66 (57%), Gaps = 6/66 (9%)
Query: 1 MNAILN--KNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIYMCDKHKQKPATIASKRM 58
MNAIL K T+ ++Y + FPC +C K IIQSGIK V Y D +K P + ++
Sbjct: 73 MNAILQCAKFGVPTEGAEIYVTHFPCLQCCKAIIQSGIKAVYYAND-YKNHPFAL---QL 128
Query: 59 FDAAKV 64
F+ A V
Sbjct: 129 FEQAGV 134
>gi|24380210|ref|NP_722165.1| deoxycytidylate deaminase [Streptococcus mutans UA159]
gi|387785491|ref|YP_006250587.1| putative deoxycytidylate deaminase [Streptococcus mutans LJ23]
gi|397650409|ref|YP_006490936.1| deoxycytidylate deaminase [Streptococcus mutans GS-5]
gi|449865122|ref|ZP_21778808.1| putative deoxycytidylate deaminase [Streptococcus mutans U2B]
gi|449870396|ref|ZP_21780605.1| putative deoxycytidylate deaminase [Streptococcus mutans 8ID3]
gi|449895038|ref|ZP_21789453.1| putative deoxycytidylate deaminase [Streptococcus mutans SF12]
gi|449899837|ref|ZP_21791256.1| putative deoxycytidylate deaminase [Streptococcus mutans R221]
gi|449910883|ref|ZP_21794905.1| putative deoxycytidylate deaminase [Streptococcus mutans OMZ175]
gi|449919709|ref|ZP_21798108.1| putative deoxycytidylate deaminase [Streptococcus mutans 1SM1]
gi|449938099|ref|ZP_21804880.1| putative deoxycytidylate deaminase [Streptococcus mutans 2ST1]
gi|449942686|ref|ZP_21806130.1| putative deoxycytidylate deaminase [Streptococcus mutans 11A1]
gi|449951113|ref|ZP_21808529.1| putative deoxycytidylate deaminase [Streptococcus mutans 11SSST2]
gi|449959795|ref|ZP_21810369.1| putative deoxycytidylate deaminase [Streptococcus mutans 4VF1]
gi|449966474|ref|ZP_21812364.1| putative deoxycytidylate deaminase [Streptococcus mutans 15VF2]
gi|449982173|ref|ZP_21818153.1| putative deoxycytidylate deaminase [Streptococcus mutans 5SM3]
gi|449992603|ref|ZP_21822357.1| putative deoxycytidylate deaminase [Streptococcus mutans NVAB]
gi|450001375|ref|ZP_21825629.1| putative deoxycytidylate deaminase [Streptococcus mutans N29]
gi|450011716|ref|ZP_21829288.1| putative deoxycytidylate deaminase [Streptococcus mutans A19]
gi|450025013|ref|ZP_21831514.1| putative deoxycytidylate deaminase [Streptococcus mutans U138]
gi|450049625|ref|ZP_21839780.1| putative deoxycytidylate deaminase [Streptococcus mutans NFSM1]
gi|450073215|ref|ZP_21848947.1| putative deoxycytidylate deaminase [Streptococcus mutans M2A]
gi|450117216|ref|ZP_21864885.1| putative deoxycytidylate deaminase [Streptococcus mutans ST1]
gi|450122736|ref|ZP_21866901.1| putative deoxycytidylate deaminase [Streptococcus mutans ST6]
gi|450127550|ref|ZP_21868652.1| putative deoxycytidylate deaminase [Streptococcus mutans U2A]
gi|450138461|ref|ZP_21872171.1| putative deoxycytidylate deaminase [Streptococcus mutans NLML1]
gi|450154588|ref|ZP_21877824.1| putative deoxycytidylate deaminase [Streptococcus mutans 21]
gi|450177811|ref|ZP_21886525.1| putative deoxycytidylate deaminase [Streptococcus mutans SM1]
gi|450181754|ref|ZP_21887997.1| putative deoxycytidylate deaminase [Streptococcus mutans 24]
gi|24378216|gb|AAN59471.1|AE015011_10 putative deoxycytidylate deaminase [Streptococcus mutans UA159]
gi|379131892|dbj|BAL68644.1| putative deoxycytidylate deaminase [Streptococcus mutans LJ23]
gi|392603978|gb|AFM82142.1| putative deoxycytidylate deaminase [Streptococcus mutans GS-5]
gi|449150153|gb|EMB53928.1| putative deoxycytidylate deaminase [Streptococcus mutans 11A1]
gi|449156589|gb|EMB60055.1| putative deoxycytidylate deaminase [Streptococcus mutans 8ID3]
gi|449159281|gb|EMB62641.1| putative deoxycytidylate deaminase [Streptococcus mutans 1SM1]
gi|449163382|gb|EMB66489.1| putative deoxycytidylate deaminase [Streptococcus mutans 2ST1]
gi|449166630|gb|EMB69560.1| putative deoxycytidylate deaminase [Streptococcus mutans 11SSST2]
gi|449168471|gb|EMB71287.1| putative deoxycytidylate deaminase [Streptococcus mutans 4VF1]
gi|449170066|gb|EMB72803.1| putative deoxycytidylate deaminase [Streptococcus mutans 15VF2]
gi|449175048|gb|EMB77493.1| putative deoxycytidylate deaminase [Streptococcus mutans 5SM3]
gi|449179589|gb|EMB81791.1| putative deoxycytidylate deaminase [Streptococcus mutans NVAB]
gi|449184636|gb|EMB86567.1| putative deoxycytidylate deaminase [Streptococcus mutans N29]
gi|449189240|gb|EMB90915.1| putative deoxycytidylate deaminase [Streptococcus mutans A19]
gi|449191383|gb|EMB92878.1| putative deoxycytidylate deaminase [Streptococcus mutans U138]
gi|449203625|gb|EMC04481.1| putative deoxycytidylate deaminase [Streptococcus mutans NFSM1]
gi|449210296|gb|EMC10765.1| putative deoxycytidylate deaminase [Streptococcus mutans M2A]
gi|449226416|gb|EMC25950.1| putative deoxycytidylate deaminase [Streptococcus mutans ST1]
gi|449227572|gb|EMC26986.1| putative deoxycytidylate deaminase [Streptococcus mutans ST6]
gi|449230525|gb|EMC29778.1| putative deoxycytidylate deaminase [Streptococcus mutans U2A]
gi|449233983|gb|EMC33021.1| putative deoxycytidylate deaminase [Streptococcus mutans NLML1]
gi|449237690|gb|EMC36505.1| putative deoxycytidylate deaminase [Streptococcus mutans 21]
gi|449243345|gb|EMC41784.1| putative deoxycytidylate deaminase [Streptococcus mutans SM1]
gi|449245799|gb|EMC44124.1| putative deoxycytidylate deaminase [Streptococcus mutans 24]
gi|449255112|gb|EMC52987.1| putative deoxycytidylate deaminase [Streptococcus mutans SF12]
gi|449257854|gb|EMC55468.1| putative deoxycytidylate deaminase [Streptococcus mutans R221]
gi|449258910|gb|EMC56464.1| putative deoxycytidylate deaminase [Streptococcus mutans OMZ175]
gi|449264463|gb|EMC61804.1| putative deoxycytidylate deaminase [Streptococcus mutans U2B]
Length = 150
Score = 77.4 bits (189), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 45/116 (38%), Positives = 67/116 (57%), Gaps = 10/116 (8%)
Query: 89 LEWHEYFMASAFLVAKRSKDPVTRVGAVIVNEDNKIVGTGYNGMPIGCSDDEFPWDKNTH 148
L W +YFMA+A L++KRS VGAV+V ++N+I+ TGYNG G +D + D
Sbjct: 5 LSWQDYFMANAELISKRSTCNRAYVGAVLV-KNNRIIATGYNG---GVADTDNCDDVGHE 60
Query: 149 DELDMC----HAEMNAILN--KNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIY 198
E C HAEMNA++ K ++Y + FPC C K ++Q+G+K++ Y
Sbjct: 61 MEDGHCIRTVHAEMNALIQCAKEGISANNTEIYVTHFPCINCTKALLQAGVKKITY 116
>gi|212638664|ref|YP_002315184.1| Late competence protein ComEB [Anoxybacillus flavithermus WK1]
gi|212560144|gb|ACJ33199.1| Late competence protein ComEB (DNA binding and uptake)
[Anoxybacillus flavithermus WK1]
Length = 155
Score = 77.4 bits (189), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 50/117 (42%), Positives = 65/117 (55%), Gaps = 6/117 (5%)
Query: 89 LEWHEYFMASAFLVAKRSKDPVTRVGAVIVNEDNKIVGTGYNGMPIGCSD--DEFPWDKN 146
+ W +YFMA + L+A RS VGA IV D +I+ GYNG G + DE + +
Sbjct: 4 ITWDQYFMAQSHLLALRSTCTRLAVGATIV-RDKRIIAGGYNGSIAGGAHCIDEGCYVID 62
Query: 147 THDELDMCHAEMNAILN--KNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIYMCD 201
H + HAEMNAIL K T+ ++Y + FPC +C K IIQSGIK V Y D
Sbjct: 63 NHC-VRTIHAEMNAILQCAKFGVPTEGAEIYVTHFPCLQCCKAIIQSGIKAVYYAND 118
Score = 45.4 bits (106), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 28/66 (42%), Positives = 38/66 (57%), Gaps = 6/66 (9%)
Query: 1 MNAILN--KNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIYMCDKHKQKPATIASKRM 58
MNAIL K T+ ++Y + FPC +C K IIQSGIK V Y D +K P + ++
Sbjct: 73 MNAILQCAKFGVPTEGAEIYVTHFPCLQCCKAIIQSGIKAVYYAND-YKNHPFAL---QL 128
Query: 59 FDAAKV 64
F+ A V
Sbjct: 129 FEQAGV 134
>gi|389571858|ref|ZP_10161946.1| ComE operon protein 2 [Bacillus sp. M 2-6]
gi|388428344|gb|EIL86141.1| ComE operon protein 2 [Bacillus sp. M 2-6]
Length = 189
Score = 77.4 bits (189), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 50/119 (42%), Positives = 66/119 (55%), Gaps = 10/119 (8%)
Query: 89 LEWHEYFMASAFLVAKRSKDPVTRVGAVIVNEDNKIVGTGYNGMPIG---CSDDE-FPWD 144
+ W++YFMA + L+A RS VGA IV D +I+ GYNG G C+D + D
Sbjct: 4 ISWNQYFMAQSHLLALRSTCERLAVGATIVR-DKRIIAGGYNGSIAGDVHCADVGCYVID 62
Query: 145 KNTHDELDMCHAEMNAILN--KNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIYMCD 201
H + HAEMNAIL K A T ++Y + FPC +C K IIQ+GI+ V Y D
Sbjct: 63 ---HHCVRTIHAEMNAILQCAKFGAPTADAEIYVTHFPCLQCCKAIIQAGIRTVYYAKD 118
Score = 44.7 bits (104), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 30/76 (39%), Positives = 42/76 (55%), Gaps = 7/76 (9%)
Query: 1 MNAILN--KNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIYMCDKHKQKPATIASKRM 58
MNAIL K A T ++Y + FPC +C K IIQ+GI+ V Y D +K P + +
Sbjct: 73 MNAILQCAKFGAPTADAEIYVTHFPCLQCCKAIIQAGIRTVYYAKD-YKNHPYAV---DL 128
Query: 59 FDAAKVHYWS-EMDKM 73
F+ A V E+D+M
Sbjct: 129 FEQAGVQTEQVELDEM 144
>gi|22537844|ref|NP_688695.1| cytidine/deoxycytidylate deaminase family protein [Streptococcus
agalactiae 2603V/R]
gi|25011789|ref|NP_736184.1| cytidine/deoxycytidylate deaminase family protein [Streptococcus
agalactiae NEM316]
gi|76788185|ref|YP_330315.1| cytidine/deoxycytidylate deaminase [Streptococcus agalactiae A909]
gi|77406599|ref|ZP_00783646.1| cytidine/deoxycytidylate deaminase family protein [Streptococcus
agalactiae H36B]
gi|77409272|ref|ZP_00785978.1| cytidine/deoxycytidylate deaminase family protein [Streptococcus
agalactiae COH1]
gi|77412446|ref|ZP_00788751.1| cytidine/deoxycytidylate deaminase family protein [Streptococcus
agalactiae CJB111]
gi|77413936|ref|ZP_00790111.1| cytidine/deoxycytidylate deaminase family protein [Streptococcus
agalactiae 515]
gi|339300899|ref|ZP_08650026.1| cytidine/deoxycytidylate deaminase [Streptococcus agalactiae ATCC
13813]
gi|406710082|ref|YP_006764808.1| cytidine/deoxycytidylate deaminase family protein [Streptococcus
agalactiae GD201008-001]
gi|410595073|ref|YP_006951800.1| ComE operon protein [Streptococcus agalactiae SA20-06]
gi|417006086|ref|ZP_11944656.1| cytidine/deoxycytidylate deaminase family protein [Streptococcus
agalactiae FSL S3-026]
gi|421147978|ref|ZP_15607650.1| cytidine/deoxycytidylate deaminase [Streptococcus agalactiae
GB00112]
gi|421531854|ref|ZP_15978231.1| cytidine/deoxycytidylate deaminase family protein [Streptococcus
agalactiae STIR-CD-17]
gi|424048853|ref|ZP_17786404.1| cytidine/deoxycytidylate deaminase [Streptococcus agalactiae
ZQ0910]
gi|22534739|gb|AAN00568.1|AE014269_12 cytidine/deoxycytidylate deaminase family protein [Streptococcus
agalactiae 2603V/R]
gi|24413330|emb|CAD47409.1| Unknown [Streptococcus agalactiae NEM316]
gi|76563242|gb|ABA45826.1| cytidine/deoxycytidylate deaminase family protein [Streptococcus
agalactiae A909]
gi|77160021|gb|EAO71157.1| cytidine/deoxycytidylate deaminase family protein [Streptococcus
agalactiae 515]
gi|77161510|gb|EAO72516.1| cytidine/deoxycytidylate deaminase family protein [Streptococcus
agalactiae CJB111]
gi|77172104|gb|EAO75267.1| cytidine/deoxycytidylate deaminase family protein [Streptococcus
agalactiae COH1]
gi|77174792|gb|EAO77614.1| cytidine/deoxycytidylate deaminase family protein [Streptococcus
agalactiae H36B]
gi|319745690|gb|EFV97989.1| cytidine/deoxycytidylate deaminase [Streptococcus agalactiae ATCC
13813]
gi|341576267|gb|EGS26678.1| cytidine/deoxycytidylate deaminase family protein [Streptococcus
agalactiae FSL S3-026]
gi|389649622|gb|EIM71098.1| cytidine/deoxycytidylate deaminase [Streptococcus agalactiae
ZQ0910]
gi|401685316|gb|EJS81324.1| cytidine/deoxycytidylate deaminase [Streptococcus agalactiae
GB00112]
gi|403642955|gb|EJZ03755.1| cytidine/deoxycytidylate deaminase family protein [Streptococcus
agalactiae STIR-CD-17]
gi|406650967|gb|AFS46368.1| cytidine/deoxycytidylate deaminase family protein [Streptococcus
agalactiae GD201008-001]
gi|410518712|gb|AFV72856.1| ComE operon protein [Streptococcus agalactiae SA20-06]
Length = 150
Score = 77.4 bits (189), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 45/116 (38%), Positives = 69/116 (59%), Gaps = 10/116 (8%)
Query: 89 LEWHEYFMASAFLVAKRSKDPVTRVGAVIVNEDNKIVGTGYNGMPIGCSDDEFPWDKNTH 148
L W +YFMA+A L++KRS VGAV+V ++N+I+ TGYNG G S+ + + +
Sbjct: 4 LSWEDYFMANAELISKRSTCDRAFVGAVLV-KNNRIIATGYNG---GVSETDNCNEVGHY 59
Query: 149 DELDMC----HAEMNAILN--KNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIY 198
E C HAEMNA++ K T ++Y + FPC C K ++Q+G+K++ Y
Sbjct: 60 MEDGHCIRTVHAEMNALIQCAKEGISTNNTEIYVTHFPCINCTKALLQAGVKKITY 115
Score = 37.7 bits (86), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 22/68 (32%), Positives = 36/68 (52%), Gaps = 6/68 (8%)
Query: 1 MNAILN--KNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIYMCDKHKQKPATIASKRM 58
MNA++ K T ++Y + FPC C K ++Q+G+K++ Y K +P A + M
Sbjct: 73 MNALIQCAKEGISTNNTEIYVTHFPCINCTKALLQAGVKKITY---KANYRPHPFAIELM 129
Query: 59 FDAAKVHY 66
+A V Y
Sbjct: 130 -EAKGVAY 136
>gi|155371563|ref|YP_001427097.1| hypothetical protein ATCV1_Z616L [Acanthocystis turfacea Chlorella
virus 1]
gi|155124883|gb|ABT16750.1| hypothetical protein ATCV1_Z616L [Acanthocystis turfacea Chlorella
virus 1]
gi|448932509|gb|AGE56068.1| dCMP deaminase [Acanthocystis turfacea Chlorella virus MO0605SPH]
gi|448936643|gb|AGE60190.1| dCMP deaminase [Acanthocystis turfacea Chlorella virus WI0606]
Length = 149
Score = 77.4 bits (189), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 38/107 (35%), Positives = 66/107 (61%), Gaps = 3/107 (2%)
Query: 93 EYFMASAFLVAKRSKDPVTRVGAVIVNEDNKIVGTGYNGMPIGCSDDEFPWDKNTHDELD 152
+++ S + SKDP T+V A++++ ++ I+ GYNG+P G + + W K +
Sbjct: 6 KFYSLSCYHAQLFSKDPNTKVAAMVIDANHNILSVGYNGLPRGFEETQERWSKPEKYQY- 64
Query: 153 MCHAEMNAILN--KNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVI 197
+ HAE NAI +N A + ++LFPC++CA++IIQ+GIK+V+
Sbjct: 65 VVHAEANAICTAARNGAKLDGGSIVSTLFPCDQCARLIIQAGIKKVV 111
Score = 40.8 bits (94), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 22/71 (30%), Positives = 39/71 (54%), Gaps = 4/71 (5%)
Query: 7 KNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIYMCDKHKQK--PATIASKRMFD--AA 62
+N A + ++LFPC++CA++IIQ+GIK+V+ + + SK MFD
Sbjct: 78 RNGAKLDGGSIVSTLFPCDQCARLIIQAGIKKVVTARPEENSSWLQSFGYSKEMFDECGV 137
Query: 63 KVHYWSEMDKM 73
++ Y S + +
Sbjct: 138 EIEYVSSISTL 148
>gi|449881082|ref|ZP_21784262.1| putative deoxycytidylate deaminase [Streptococcus mutans SA38]
gi|449926348|ref|ZP_21800720.1| putative deoxycytidylate deaminase [Streptococcus mutans 4SM1]
gi|449932526|ref|ZP_21802881.1| putative deoxycytidylate deaminase [Streptococcus mutans 3SN1]
gi|449971980|ref|ZP_21814607.1| putative deoxycytidylate deaminase [Streptococcus mutans 2VS1]
gi|449975559|ref|ZP_21815856.1| putative deoxycytidylate deaminase [Streptococcus mutans 11VS1]
gi|449987412|ref|ZP_21820413.1| putative deoxycytidylate deaminase [Streptococcus mutans NFSM2]
gi|450030792|ref|ZP_21833420.1| putative deoxycytidylate deaminase [Streptococcus mutans G123]
gi|450036091|ref|ZP_21835337.1| putative deoxycytidylate deaminase [Streptococcus mutans M21]
gi|450046788|ref|ZP_21839146.1| putative deoxycytidylate deaminase [Streptococcus mutans N34]
gi|450056778|ref|ZP_21842232.1| putative deoxycytidylate deaminase [Streptococcus mutans NLML4]
gi|450067095|ref|ZP_21846411.1| putative deoxycytidylate deaminase [Streptococcus mutans NLML9]
gi|450084099|ref|ZP_21853188.1| putative deoxycytidylate deaminase [Streptococcus mutans N66]
gi|450093302|ref|ZP_21856538.1| putative deoxycytidylate deaminase [Streptococcus mutans W6]
gi|450101839|ref|ZP_21859210.1| putative deoxycytidylate deaminase [Streptococcus mutans SF1]
gi|450112255|ref|ZP_21863139.1| putative deoxycytidylate deaminase [Streptococcus mutans SM6]
gi|450149318|ref|ZP_21876071.1| putative deoxycytidylate deaminase [Streptococcus mutans 14D]
gi|450166751|ref|ZP_21882435.1| putative deoxycytidylate deaminase [Streptococcus mutans B]
gi|450171850|ref|ZP_21884234.1| putative deoxycytidylate deaminase [Streptococcus mutans SM4]
gi|449160723|gb|EMB63967.1| putative deoxycytidylate deaminase [Streptococcus mutans 4SM1]
gi|449161256|gb|EMB64460.1| putative deoxycytidylate deaminase [Streptococcus mutans 3SN1]
gi|449171303|gb|EMB73969.1| putative deoxycytidylate deaminase [Streptococcus mutans 2VS1]
gi|449176262|gb|EMB78619.1| putative deoxycytidylate deaminase [Streptococcus mutans NFSM2]
gi|449176725|gb|EMB79056.1| putative deoxycytidylate deaminase [Streptococcus mutans 11VS1]
gi|449192377|gb|EMB93802.1| putative deoxycytidylate deaminase [Streptococcus mutans G123]
gi|449194624|gb|EMB95975.1| putative deoxycytidylate deaminase [Streptococcus mutans M21]
gi|449198314|gb|EMB99432.1| putative deoxycytidylate deaminase [Streptococcus mutans N34]
gi|449206341|gb|EMC07047.1| putative deoxycytidylate deaminase [Streptococcus mutans NLML4]
gi|449208318|gb|EMC08924.1| putative deoxycytidylate deaminase [Streptococcus mutans NLML9]
gi|449212201|gb|EMC12576.1| putative deoxycytidylate deaminase [Streptococcus mutans N66]
gi|449217324|gb|EMC17386.1| putative deoxycytidylate deaminase [Streptococcus mutans W6]
gi|449219709|gb|EMC19659.1| putative deoxycytidylate deaminase [Streptococcus mutans SF1]
gi|449222450|gb|EMC22177.1| putative deoxycytidylate deaminase [Streptococcus mutans SM6]
gi|449234685|gb|EMC33680.1| putative deoxycytidylate deaminase [Streptococcus mutans 14D]
gi|449239274|gb|EMC38000.1| putative deoxycytidylate deaminase [Streptococcus mutans B]
gi|449243457|gb|EMC41884.1| putative deoxycytidylate deaminase [Streptococcus mutans SM4]
gi|449251909|gb|EMC49906.1| putative deoxycytidylate deaminase [Streptococcus mutans SA38]
Length = 149
Score = 77.4 bits (189), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 45/116 (38%), Positives = 67/116 (57%), Gaps = 10/116 (8%)
Query: 89 LEWHEYFMASAFLVAKRSKDPVTRVGAVIVNEDNKIVGTGYNGMPIGCSDDEFPWDKNTH 148
L W +YFMA+A L++KRS VGAV+V ++N+I+ TGYNG G +D + D
Sbjct: 4 LSWQDYFMANAELISKRSTCNRAYVGAVLV-KNNRIIATGYNG---GVADTDNCDDVGHE 59
Query: 149 DELDMC----HAEMNAILN--KNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIY 198
E C HAEMNA++ K ++Y + FPC C K ++Q+G+K++ Y
Sbjct: 60 MEDGHCIRTVHAEMNALIQCAKEGISANNTEIYVTHFPCINCTKALLQAGVKKITY 115
>gi|407978448|ref|ZP_11159279.1| dCMP deaminase [Bacillus sp. HYC-10]
gi|407415006|gb|EKF36622.1| dCMP deaminase [Bacillus sp. HYC-10]
Length = 189
Score = 77.4 bits (189), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 50/119 (42%), Positives = 66/119 (55%), Gaps = 10/119 (8%)
Query: 89 LEWHEYFMASAFLVAKRSKDPVTRVGAVIVNEDNKIVGTGYNGMPIG---CSDDE-FPWD 144
+ W++YFMA + L+A RS VGA IV D +I+ GYNG G C+D + D
Sbjct: 4 ISWNQYFMAQSHLLALRSTCERLAVGATIVR-DKRIIAGGYNGSIAGDVHCADVGCYVID 62
Query: 145 KNTHDELDMCHAEMNAILN--KNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIYMCD 201
H + HAEMNAIL K A T ++Y + FPC +C K IIQ+GI+ V Y D
Sbjct: 63 ---HHCVRTIHAEMNAILQCAKFGAPTADAEIYVTHFPCLQCCKAIIQAGIRTVYYAKD 118
Score = 45.1 bits (105), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 30/76 (39%), Positives = 42/76 (55%), Gaps = 7/76 (9%)
Query: 1 MNAILN--KNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIYMCDKHKQKPATIASKRM 58
MNAIL K A T ++Y + FPC +C K IIQ+GI+ V Y D +K P + +
Sbjct: 73 MNAILQCAKFGAPTADAEIYVTHFPCLQCCKAIIQAGIRTVYYAKD-YKNHPYAV---DL 128
Query: 59 FDAAKVHYWS-EMDKM 73
F+ A V E+D+M
Sbjct: 129 FEQAGVQTEQVELDEM 144
>gi|450161868|ref|ZP_21880690.1| putative deoxycytidylate deaminase [Streptococcus mutans 66-2A]
gi|449238079|gb|EMC36865.1| putative deoxycytidylate deaminase [Streptococcus mutans 66-2A]
Length = 149
Score = 77.4 bits (189), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 45/116 (38%), Positives = 67/116 (57%), Gaps = 10/116 (8%)
Query: 89 LEWHEYFMASAFLVAKRSKDPVTRVGAVIVNEDNKIVGTGYNGMPIGCSDDEFPWDKNTH 148
L W +YFMA+A L++KRS VGAV+V ++N+I+ TGYNG G +D + D
Sbjct: 4 LSWQDYFMANAELISKRSTCNRAYVGAVLV-KNNRIIATGYNG---GVADTDNCDDVGHE 59
Query: 149 DELDMC----HAEMNAILN--KNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIY 198
E C HAEMNA++ K ++Y + FPC C K ++Q+G+K++ Y
Sbjct: 60 MEDGHCIRTVHAEMNALIQCAKEGISANNTEIYVTHFPCINCTKALLQAGVKKITY 115
>gi|408906032|emb|CBX87954.1| hypothetical protein [Roseovarius Plymouth podovirus 1]
Length = 143
Score = 77.4 bits (189), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 41/106 (38%), Positives = 58/106 (54%), Gaps = 1/106 (0%)
Query: 93 EYFMASAFLVAKRSKDPVTRVGAVIVNEDNKIVGTGYNGMPIGCSDDEFPWDKNTHDELD 152
E+ + A V+ RS+DP T+VGAVI+ D I GYNG P D + W+ T
Sbjct: 7 EWALGLAQAVSLRSRDPSTKVGAVIIRPDKTIASMGYNGFPRTMQDKDIWWNDRTEKYAR 66
Query: 153 MCHAEMNAILNKNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIY 198
+ HAEMNA+LN + +LY + C CAK +I +GI+ V +
Sbjct: 67 VIHAEMNALLNAKES-VNGMQLYCTHPCCEHCAKHVIAAGIRHVHF 111
>gi|258517245|ref|YP_003193467.1| ComE operon protein 2 [Desulfotomaculum acetoxidans DSM 771]
gi|257780950|gb|ACV64844.1| ComE operon protein 2 [Desulfotomaculum acetoxidans DSM 771]
Length = 154
Score = 77.4 bits (189), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 50/115 (43%), Positives = 63/115 (54%), Gaps = 8/115 (6%)
Query: 89 LEWHEYFMASAFLVAKRSKDPVTRVGAVIVNEDNKIVGTGYNGMPIG---CSDDEFPWDK 145
+ WHEYFM A ++A RS VG +IV + I G GYNG G C DD D
Sbjct: 4 ISWHEYFMGQAKIIALRSSCSRLSVGCLIVRDRRSIAG-GYNGSVSGDVHCLDDGCRID- 61
Query: 146 NTHDELDMCHAEMNAILN--KNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIY 198
N H + HAE NAI+ K A T+ +Y + FPC CAK+IIQ+GI+ V Y
Sbjct: 62 NGH-CVRCVHAEANAIVQCAKFGASTEGTDIYVTHFPCLNCAKLIIQAGIRHVYY 115
Score = 39.7 bits (91), Expect = 0.72, Method: Compositional matrix adjust.
Identities = 20/42 (47%), Positives = 27/42 (64%), Gaps = 2/42 (4%)
Query: 2 NAILN--KNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIY 41
NAI+ K A T+ +Y + FPC CAK+IIQ+GI+ V Y
Sbjct: 74 NAIVQCAKFGASTEGTDIYVTHFPCLNCAKLIIQAGIRHVYY 115
>gi|304317923|ref|YP_003853068.1| zinc-binding CMP/dCMP deaminase [Thermoanaerobacterium
thermosaccharolyticum DSM 571]
gi|302779425|gb|ADL69984.1| CMP/dCMP deaminase zinc-binding [Thermoanaerobacterium
thermosaccharolyticum DSM 571]
Length = 147
Score = 77.4 bits (189), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 50/122 (40%), Positives = 62/122 (50%), Gaps = 12/122 (9%)
Query: 91 WHEYFMASAFLVAKRSKDPVTRVGAVIVNEDNKIVGTGYNGMP--------IGCSDDEFP 142
W EYFM +V RS +VGAVIV +D I+ TGYNG P +GC +
Sbjct: 5 WDEYFMMVVDVVKTRSTCLRRQVGAVIV-KDKHIISTGYNGAPTGLKHCEEVGCMRENLN 63
Query: 143 WDKNTHDEL-DMCHAEMNAILNK--NSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIYM 199
EL HAE NAI+ N TK +Y S PC+ CAK+II +GIK V+Y
Sbjct: 64 IPSGERHELCRGTHAEQNAIIQAALNGVSTKDATIYVSASPCSMCAKMIINAGIKRVVYE 123
Query: 200 CD 201
D
Sbjct: 124 GD 125
Score = 41.2 bits (95), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 21/45 (46%), Positives = 27/45 (60%), Gaps = 2/45 (4%)
Query: 2 NAILNK--NSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIYMCD 44
NAI+ N TK +Y S PC+ CAK+II +GIK V+Y D
Sbjct: 81 NAIIQAALNGVSTKDATIYVSASPCSMCAKMIINAGIKRVVYEGD 125
>gi|73662478|ref|YP_301259.1| dCMP deaminase [Staphylococcus saprophyticus subsp. saprophyticus
ATCC 15305]
gi|418576037|ref|ZP_13140183.1| putative dCMP deaminase [Staphylococcus saprophyticus subsp.
saprophyticus KACC 16562]
gi|72494993|dbj|BAE18314.1| putative dCMP deaminase [Staphylococcus saprophyticus subsp.
saprophyticus ATCC 15305]
gi|379325099|gb|EHY92231.1| putative dCMP deaminase [Staphylococcus saprophyticus subsp.
saprophyticus KACC 16562]
Length = 153
Score = 77.4 bits (189), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 49/120 (40%), Positives = 63/120 (52%), Gaps = 8/120 (6%)
Query: 87 DVLEWHEYFMASAFLVAKRSKDPVTRVGAVIVNEDNKIVGTGYNGMPIG---CSDDEFPW 143
D ++W EYFMA + L+A RS VGA IV +DN+I+ GYNG G C D+
Sbjct: 2 DRIKWEEYFMAQSHLLALRSTCERLSVGATIV-KDNRIIAGGYNGSVSGEVHCIDEGCLL 60
Query: 144 DKNTHDELDMCHAEMNAILN--KNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIYMCD 201
+ + HAEMNA+L K T +Y + FPC C K IIQSGI + Y D
Sbjct: 61 EDG--HCIRTIHAEMNALLQCAKQGVSTDGATIYVTHFPCLNCTKSIIQSGIDTIYYAED 118
Score = 41.2 bits (95), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 22/53 (41%), Positives = 26/53 (49%), Gaps = 2/53 (3%)
Query: 1 MNAILN--KNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIYMCDKHKQKPA 51
MNA+L K T +Y + FPC C K IIQSGI + Y D H A
Sbjct: 73 MNALLQCAKQGVSTDGATIYVTHFPCLNCTKSIIQSGIDTIYYAEDYHNHTYA 125
>gi|325849001|ref|ZP_08170511.1| putative ComE operon protein 2 [Anaerococcus hydrogenalis
ACS-025-V-Sch4]
gi|325480645|gb|EGC83707.1| putative ComE operon protein 2 [Anaerococcus hydrogenalis
ACS-025-V-Sch4]
Length = 146
Score = 77.4 bits (189), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 46/121 (38%), Positives = 63/121 (52%), Gaps = 3/121 (2%)
Query: 87 DVLEWHEYFMASAFLVAKRSKDPVTRVGAVIVNEDNKIVGTGYNGMPIGCSD-DEFPWDK 145
D L W++YF+ A +VA R VG V+VN +N+I+ TGYNG G DE
Sbjct: 4 DRLTWNQYFIKLAHMVALRGTCDRAYVGCVLVNNENRIISTGYNGSIKGNPHCDEVGHTM 63
Query: 146 NTHDELDMCHAEMNAIL--NKNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIYMCDKQ 203
+ HAEMNA+L K K Y + FPC C K +IQ+G+KE+ Y D +
Sbjct: 64 RDGHCIATIHAEMNALLYCAKEGISVKNSICYVTHFPCLNCTKSLIQAGVKEIYYTNDYR 123
Query: 204 M 204
+
Sbjct: 124 I 124
Score = 36.6 bits (83), Expect = 5.8, Method: Compositional matrix adjust.
Identities = 19/46 (41%), Positives = 25/46 (54%), Gaps = 2/46 (4%)
Query: 1 MNAIL--NKNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIYMCD 44
MNA+L K K Y + FPC C K +IQ+G+KE+ Y D
Sbjct: 76 MNALLYCAKEGISVKNSICYVTHFPCLNCTKSLIQAGVKEIYYTND 121
>gi|384160206|ref|YP_005542279.1| enzyme associated to DNA transport (competence) [Bacillus
amyloliquefaciens TA208]
gi|384165135|ref|YP_005546514.1| ComE operon protein 2 [Bacillus amyloliquefaciens LL3]
gi|384169276|ref|YP_005550654.1| protein required for DNA binding and uptake (competence) [Bacillus
amyloliquefaciens XH7]
gi|328554294|gb|AEB24786.1| enzyme associated to DNA transport (competence) [Bacillus
amyloliquefaciens TA208]
gi|328912690|gb|AEB64286.1| ComE operon protein 2 [Bacillus amyloliquefaciens LL3]
gi|341828555|gb|AEK89806.1| protein required for DNA binding and uptake (competence) [Bacillus
amyloliquefaciens XH7]
Length = 189
Score = 77.4 bits (189), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 48/118 (40%), Positives = 69/118 (58%), Gaps = 8/118 (6%)
Query: 89 LEWHEYFMASAFLVAKRSKDPVTRVGAVIVNEDNKIVGTGYNGMPIG---CSDDEFPWDK 145
+ W++YFMA + L+A RS P VGA +V D +++ GYNG G C+D+
Sbjct: 4 ISWNQYFMAQSHLLALRSTCPRLSVGATVVR-DKRMIAGGYNGSIAGGVHCADEGCLLID 62
Query: 146 NTHDELDMCHAEMNAIL--NKNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIYMCD 201
N H + + HAEMNAIL +K T+ ++Y + +PC +C K IIQ+GIK V Y D
Sbjct: 63 N-HCQRTI-HAEMNAILQCSKFGVPTEGAEIYVTHYPCIQCCKSIIQAGIKTVYYAED 118
Score = 44.7 bits (104), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 30/76 (39%), Positives = 45/76 (59%), Gaps = 7/76 (9%)
Query: 1 MNAIL--NKNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIYMCDKHKQKPATIASKRM 58
MNAIL +K T+ ++Y + +PC +C K IIQ+GIK V Y D +K +P +K +
Sbjct: 73 MNAILQCSKFGVPTEGAEIYVTHYPCIQCCKSIIQAGIKTVYYAED-YKTQP---YAKEL 128
Query: 59 FDAAKVHYWS-EMDKM 73
F+ A V E+D+M
Sbjct: 129 FNQAGVKVEQVELDEM 144
>gi|296532454|ref|ZP_06895178.1| deoxycytidylate deaminase [Roseomonas cervicalis ATCC 49957]
gi|296267229|gb|EFH13130.1| deoxycytidylate deaminase [Roseomonas cervicalis ATCC 49957]
Length = 201
Score = 77.4 bits (189), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 46/123 (37%), Positives = 68/123 (55%), Gaps = 5/123 (4%)
Query: 84 RVDDVLEWHEYFMASAFLVAKRSKDPVTRVGAVIVNEDN-KIVGTGYNGMPIGCSDD-EF 141
R D + W ++ A +A+ SKDP +VGAV+VN+ +IV TG+NG P D E
Sbjct: 10 RPDKLARWDSRYIGLAHHIAQWSKDPRAKVGAVLVNQPQARIVATGFNGFPSNVEDSAER 69
Query: 142 PWDKNTHDELDMCHAEMNAILNKNSADTKRCKLYTSLFP-CNECAKVIIQSGIKEVIYMC 200
DK T + M HAE NA+L+ + + C Y P CN CA ++IQ+G+K V+
Sbjct: 70 LQDKATKLRM-MVHAEQNALLHAGH-NARGCDAYVVGKPVCNTCATLLIQAGVKRVVAAA 127
Query: 201 DKQ 203
++
Sbjct: 128 PRE 130
>gi|338730712|ref|YP_004660104.1| CMP/dCMP deaminase zinc-binding protein [Thermotoga thermarum DSM
5069]
gi|335365063|gb|AEH51008.1| CMP/dCMP deaminase zinc-binding protein [Thermotoga thermarum DSM
5069]
Length = 208
Score = 77.4 bits (189), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 50/124 (40%), Positives = 66/124 (53%), Gaps = 12/124 (9%)
Query: 89 LEWHEYFMASAFLVAKRSKDPVTRVGAVIVNEDNKIVGTGYN----GMP----IGCSDDE 140
L W YFM LV+ RS +VGAVIV E N+I+ TGYN G P IGC D
Sbjct: 56 LSWDIYFMKICKLVSTRSSCSHRKVGAVIVKE-NRILATGYNQPPSGFPHCETIGCIRDG 114
Query: 141 FPWDKNTHDELDMC-HAEMNAILN--KNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVI 197
+ E+ HAE NA++ K T LYT+ PC+ CA++I+ +GIK V+
Sbjct: 115 LKIQSGENQEICFALHAEQNALMQAAKFGISTNGATLYTTFKPCSICARLIVNAGIKRVV 174
Query: 198 YMCD 201
Y+ D
Sbjct: 175 YLYD 178
Score = 38.5 bits (88), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 18/45 (40%), Positives = 28/45 (62%), Gaps = 2/45 (4%)
Query: 2 NAILN--KNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIYMCD 44
NA++ K T LYT+ PC+ CA++I+ +GIK V+Y+ D
Sbjct: 134 NALMQAAKFGISTNGATLYTTFKPCSICARLIVNAGIKRVVYLYD 178
>gi|302797462|ref|XP_002980492.1| hypothetical protein SELMODRAFT_420076 [Selaginella moellendorffii]
gi|300152108|gb|EFJ18752.1| hypothetical protein SELMODRAFT_420076 [Selaginella moellendorffii]
Length = 109
Score = 77.4 bits (189), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 33/51 (64%), Positives = 41/51 (80%)
Query: 153 MCHAEMNAILNKNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIYMCDKQ 203
+CHAE+NAILN+N A +LY ++FPCNECAKVIIQ+GI EVI+ DKQ
Sbjct: 26 VCHAEVNAILNRNHASASGQRLYVTMFPCNECAKVIIQAGIAEVIFYTDKQ 76
Score = 65.9 bits (159), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 32/65 (49%), Positives = 42/65 (64%), Gaps = 1/65 (1%)
Query: 1 MNAILNKNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIYMCDKHKQKPATI-ASKRMF 59
+NAILN+N A +LY ++FPCNECAKVIIQ+GI EVI+ DK AS+++
Sbjct: 31 VNAILNRNHASASGQRLYVTMFPCNECAKVIIQAGIAEVIFYTDKQSHPNFQFTASRKLL 90
Query: 60 DAAKV 64
A V
Sbjct: 91 SMANV 95
>gi|194017722|ref|ZP_03056332.1| ComE operon protein 2 [Bacillus pumilus ATCC 7061]
gi|194010622|gb|EDW20194.1| ComE operon protein 2 [Bacillus pumilus ATCC 7061]
Length = 189
Score = 77.4 bits (189), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 50/119 (42%), Positives = 66/119 (55%), Gaps = 10/119 (8%)
Query: 89 LEWHEYFMASAFLVAKRSKDPVTRVGAVIVNEDNKIVGTGYNGMPIG---CSDDE-FPWD 144
+ W++YFMA + L+A RS VGA IV D +I+ GYNG G C+D + D
Sbjct: 4 ISWNQYFMAQSHLLALRSTCERLAVGATIVR-DKRIIAGGYNGSIAGDVHCADVGCYVID 62
Query: 145 KNTHDELDMCHAEMNAILN--KNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIYMCD 201
H + HAEMNAIL K A T ++Y + FPC +C K IIQ+GI+ V Y D
Sbjct: 63 ---HHCVRTIHAEMNAILQCAKFGAPTADAEIYVTHFPCLQCCKAIIQAGIRTVYYAKD 118
Score = 45.4 bits (106), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 31/76 (40%), Positives = 42/76 (55%), Gaps = 7/76 (9%)
Query: 1 MNAILN--KNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIYMCDKHKQKPATIASKRM 58
MNAIL K A T ++Y + FPC +C K IIQ+GI+ V Y D +K P I +
Sbjct: 73 MNAILQCAKFGAPTADAEIYVTHFPCLQCCKAIIQAGIRTVYYAKD-YKNHPYAI---DL 128
Query: 59 FDAAKVHYWS-EMDKM 73
F+ A V E+D+M
Sbjct: 129 FEQAGVQTEQVELDEM 144
>gi|50914883|ref|YP_060855.1| ComE operon protein 2 [Streptococcus pyogenes MGAS10394]
gi|94989182|ref|YP_597283.1| comE operon protein 2 [Streptococcus pyogenes MGAS9429]
gi|94993070|ref|YP_601169.1| ComE operon protein 2 [Streptococcus pyogenes MGAS2096]
gi|94995003|ref|YP_603101.1| ComE operon protein 2 [Streptococcus pyogenes MGAS10750]
gi|50903957|gb|AAT87672.1| ComE operon protein 2 [Streptococcus pyogenes MGAS10394]
gi|94542690|gb|ABF32739.1| comE operon protein 2 [Streptococcus pyogenes MGAS9429]
gi|94546578|gb|ABF36625.1| ComE operon protein 2 [Streptococcus pyogenes MGAS2096]
gi|94548511|gb|ABF38557.1| ComE operon protein 2 [Streptococcus pyogenes MGAS10750]
Length = 168
Score = 77.4 bits (189), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 46/116 (39%), Positives = 67/116 (57%), Gaps = 10/116 (8%)
Query: 89 LEWHEYFMASAFLVAKRSKDPVTRVGAVIVNEDNKIVGTGYNGMPIGCSDDEFPWDKNTH 148
L W +YFMA+A L++KRS VGAV+V +DN+I+ TGYNG G S + + +
Sbjct: 20 LSWQDYFMANAELISKRSTCDRAFVGAVLV-KDNRIIATGYNG---GVSATDNCNEAGHY 75
Query: 149 DELDMC----HAEMNAILN--KNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIY 198
E C HAEMNA++ K T ++Y + FPC C K ++Q+GI ++ Y
Sbjct: 76 MEDGHCIRTVHAEMNALIQCAKEGISTDGTEIYVTHFPCINCTKALLQAGITKITY 131
>gi|306826735|ref|ZP_07460037.1| competence protein ComEB [Streptococcus pyogenes ATCC 10782]
gi|304431024|gb|EFM34031.1| competence protein ComEB [Streptococcus pyogenes ATCC 10782]
Length = 163
Score = 77.4 bits (189), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 46/116 (39%), Positives = 67/116 (57%), Gaps = 10/116 (8%)
Query: 89 LEWHEYFMASAFLVAKRSKDPVTRVGAVIVNEDNKIVGTGYNGMPIGCSDDEFPWDKNTH 148
L W +YFMA+A L++KRS VGAV+V +DN+I+ TGYNG G S + + +
Sbjct: 15 LSWQDYFMANAELISKRSTCDRAFVGAVLV-KDNRIIATGYNG---GVSATDNCNEAGHY 70
Query: 149 DELDMC----HAEMNAILN--KNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIY 198
E C HAEMNA++ K T ++Y + FPC C K ++Q+GI ++ Y
Sbjct: 71 MEDGHCIRTVHAEMNALIQCAKEGISTDGTEIYVTHFPCINCTKALLQAGITKITY 126
>gi|78186601|ref|YP_374644.1| deoxycytidylate deaminase [Chlorobium luteolum DSM 273]
gi|78166503|gb|ABB23601.1| deoxycytidylate deaminase, putative [Chlorobium luteolum DSM 273]
Length = 187
Score = 77.4 bits (189), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 47/136 (34%), Positives = 70/136 (51%), Gaps = 13/136 (9%)
Query: 75 GVQNGSPHKRVDDVLEWHEYFMASAFLVAKRSKDPVTRVGAVIVNEDNKIVGTGYNGMPI 134
G G + + L WHEYFM+ A L+++R+ +GAVIV D+ I+ TGYNG P
Sbjct: 19 GNDAGEGSRGTEKRLGWHEYFMSVAHLISRRATCTRGHIGAVIV-RDHSILSTGYNGAPS 77
Query: 135 G---CSDDEFPWDKNTHDE-------LDMCHAEMNAILN--KNSADTKRCKLYTSLFPCN 182
G C++ ++TH + ++ HAE+NAI K+ +Y + PC
Sbjct: 78 GLPHCNETNCRIYRSTHPDGTVEENCVNTIHAEINAIAQAAKHGVSISDSDIYITASPCI 137
Query: 183 ECAKVIIQSGIKEVIY 198
C KV+I GIK + Y
Sbjct: 138 HCLKVLINVGIKTIYY 153
>gi|119356771|ref|YP_911415.1| zinc-binding CMP/dCMP deaminase [Chlorobium phaeobacteroides DSM
266]
gi|119354120|gb|ABL64991.1| CMP/dCMP deaminase, zinc-binding protein [Chlorobium
phaeobacteroides DSM 266]
Length = 173
Score = 77.4 bits (189), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 46/122 (37%), Positives = 65/122 (53%), Gaps = 13/122 (10%)
Query: 89 LEWHEYFMASAFLVAKRSKDPVTRVGAVIVNEDNKIVGTGYNGMPIG---CSDDEFPWDK 145
L W EYFM+ A L+++R+ +GAVIV DN I+ TGYNG P G C + +
Sbjct: 25 LGWQEYFMSVAHLISRRATCTRAHIGAVIV-RDNNILSTGYNGAPSGLPHCDETNCRIYR 83
Query: 146 NTHDE-------LDMCHAEMNAILN--KNSADTKRCKLYTSLFPCNECAKVIIQSGIKEV 196
+TH + ++ HAE+NAI K+ K +Y + PC C KV+I GIK +
Sbjct: 84 STHPDGTVEENCVNTIHAEINAIAQAAKHGVSIKDADIYITASPCIHCLKVLINVGIKTI 143
Query: 197 IY 198
Y
Sbjct: 144 YY 145
>gi|210623304|ref|ZP_03293721.1| hypothetical protein CLOHIR_01671 [Clostridium hiranonis DSM 13275]
gi|210153705|gb|EEA84711.1| hypothetical protein CLOHIR_01671 [Clostridium hiranonis DSM 13275]
Length = 149
Score = 77.4 bits (189), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 50/122 (40%), Positives = 64/122 (52%), Gaps = 12/122 (9%)
Query: 91 WHEYFMASAFLVAKRSKDPVTRVGAVIVNEDNKIVGTGYNGMP--------IGCSDDEFP 142
W EYFM A +V KRS +VGA+IV +D +I+ TGYNG P IGC ++
Sbjct: 5 WDEYFMEIAEVVKKRSTCIRRQVGAIIV-KDKQILTTGYNGAPKNLEHCQNIGCKREQMH 63
Query: 143 WDKNTHDEL-DMCHAEMNAILNK--NSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIYM 199
EL HAE NAI+ N K LY + PC CAK+ I +GIK++IY
Sbjct: 64 IPSGERHELCRALHAEQNAIIQAAYNGVSIKDATLYVTTRPCVLCAKMCINAGIKKIIYK 123
Query: 200 CD 201
D
Sbjct: 124 GD 125
>gi|448935965|gb|AGE59514.1| dCMP deaminase [Acanthocystis turfacea Chlorella virus OR0704.3]
Length = 149
Score = 77.4 bits (189), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 38/107 (35%), Positives = 66/107 (61%), Gaps = 3/107 (2%)
Query: 93 EYFMASAFLVAKRSKDPVTRVGAVIVNEDNKIVGTGYNGMPIGCSDDEFPWDKNTHDELD 152
+++ S + SKDP T+V A++++ ++ I+ GYNG+P G + + W K +
Sbjct: 6 KFYSLSCYHAQLFSKDPNTKVAAMVIDANHNILSVGYNGLPRGFEETQERWSKPEKYQY- 64
Query: 153 MCHAEMNAILN--KNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVI 197
+ HAE NAI +N A + ++LFPC++CA++IIQ+GIK+V+
Sbjct: 65 VVHAEANAICTAARNGAKLDGGSIVSTLFPCDQCARLIIQAGIKKVV 111
Score = 40.4 bits (93), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 15/34 (44%), Positives = 26/34 (76%)
Query: 7 KNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVI 40
+N A + ++LFPC++CA++IIQ+GIK+V+
Sbjct: 78 RNGAKLDGGSIVSTLFPCDQCARLIIQAGIKKVV 111
>gi|312129766|ref|YP_003997106.1| cmp/dcmp deaminase zinc-binding protein [Leadbetterella byssophila
DSM 17132]
gi|311906312|gb|ADQ16753.1| CMP/dCMP deaminase zinc-binding protein [Leadbetterella byssophila
DSM 17132]
Length = 152
Score = 77.4 bits (189), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 51/121 (42%), Positives = 65/121 (53%), Gaps = 9/121 (7%)
Query: 87 DVLEWHEYFMASAFLVAKRSKDPVTRVGAVIVNEDNKIVGTGYNGMPIGCS--DDEFPWD 144
D ++ + FM A +AKRS +VGAV+VN D +I+ GYNG P G DDEF
Sbjct: 2 DKPKFDDIFMDLAIQLAKRSHCVRAQVGAVLVN-DTRIISIGYNGPPAGTHNCDDEFGEQ 60
Query: 145 KNTHDELDMC----HAEMNAIL--NKNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIY 198
D C HAE NAIL KN A+ + LY +L PC CA+VI IK+V Y
Sbjct: 61 GCPRDSKGSCSLALHAEQNAILYATKNGANVEGSTLYVTLSPCIACARVIFSMKIKKVFY 120
Query: 199 M 199
+
Sbjct: 121 L 121
Score = 38.5 bits (88), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 20/43 (46%), Positives = 26/43 (60%), Gaps = 2/43 (4%)
Query: 2 NAIL--NKNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIYM 42
NAIL KN A+ + LY +L PC CA+VI IK+V Y+
Sbjct: 79 NAILYATKNGANVEGSTLYVTLSPCIACARVIFSMKIKKVFYL 121
>gi|148973883|ref|ZP_01811416.1| putative deoxycytidylate deaminase [Vibrionales bacterium SWAT-3]
gi|417948590|ref|ZP_12591734.1| putative deoxycytidylate deaminase [Vibrio splendidus ATCC 33789]
gi|145965580|gb|EDK30828.1| putative deoxycytidylate deaminase [Vibrionales bacterium SWAT-3]
gi|342809537|gb|EGU44654.1| putative deoxycytidylate deaminase [Vibrio splendidus ATCC 33789]
Length = 147
Score = 77.4 bits (189), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 47/109 (43%), Positives = 58/109 (53%), Gaps = 3/109 (2%)
Query: 88 VLEWHEYFMASAFLVAKRSKDPVTRVGAVIVNEDNKIVGTGYNGMPIGCSDDEFPWDKNT 147
+ +W + F A LV SKDP T+VGAVI N+IV G+NG P G SD D
Sbjct: 2 ISKWAKRFYQMAELVGSWSKDPSTQVGAVITKH-NRIVSVGFNGYPHGVSDSADT-DDRE 59
Query: 148 HDELDMCHAEMNAILNKNSADTKRCKLYTSLFPCNECAKVIIQSGIKEV 196
L HAE NAIL D C+++ + FPC CA IIQ+GI V
Sbjct: 60 MKYLKTLHAEENAILFAKR-DLDSCEIWVTHFPCPNCAAKIIQTGISAV 107
>gi|448926008|gb|AGE49586.1| dCMP deaminase [Acanthocystis turfacea Chlorella virus Can0610SP]
Length = 149
Score = 77.4 bits (189), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 38/107 (35%), Positives = 66/107 (61%), Gaps = 3/107 (2%)
Query: 93 EYFMASAFLVAKRSKDPVTRVGAVIVNEDNKIVGTGYNGMPIGCSDDEFPWDKNTHDELD 152
+++ S + SKDP T+V A++++ ++ I+ GYNG+P G + + W K +
Sbjct: 6 KFYSLSCYHAQLFSKDPNTKVAAMVIDANHNILSVGYNGLPRGFEETQERWSKPEKYQY- 64
Query: 153 MCHAEMNAILN--KNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVI 197
+ HAE NAI +N A + ++LFPC++CA++IIQ+GIK+V+
Sbjct: 65 VVHAEANAICTAARNGAKLDGGSIVSTLFPCDQCARLIIQAGIKKVV 111
Score = 40.4 bits (93), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 15/34 (44%), Positives = 26/34 (76%)
Query: 7 KNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVI 40
+N A + ++LFPC++CA++IIQ+GIK+V+
Sbjct: 78 RNGAKLDGGSIVSTLFPCDQCARLIIQAGIKKVV 111
>gi|118602342|ref|YP_903557.1| CMP/dCMP deaminase, zinc-binding [Candidatus Ruthia magnifica str.
Cm (Calyptogena magnifica)]
gi|118567281|gb|ABL02086.1| CMP/dCMP deaminase, zinc-binding protein [Candidatus Ruthia
magnifica str. Cm (Calyptogena magnifica)]
Length = 148
Score = 77.4 bits (189), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 46/114 (40%), Positives = 64/114 (56%), Gaps = 9/114 (7%)
Query: 90 EWHEYFMASAFLVAKRSKDPVTRVGAVIVNEDNKIVGTGYNGMPIGCSDDEFPWDKNTHD 149
+W E +++ A ++ SKDP T+VGA+ V + +++ G+NG P G D + D+ H
Sbjct: 6 KWDERYLSLAKEISTWSKDPSTQVGAITVGQKKEVLSQGFNGFPRGIHDSD---DRYNHR 62
Query: 150 ELD---MCHAEMNAILNKNSADTKR--CKLYTSLFP-CNECAKVIIQSGIKEVI 197
E + HAEMNAI N + T LY P C ECAK IIQ GIK+VI
Sbjct: 63 ETKYQFVVHAEMNAIYNATYSGTSLDGATLYVYGLPICLECAKGIIQVGIKKVI 116
>gi|448933179|gb|AGE56736.1| dCMP deaminase [Acanthocystis turfacea Chlorella virus NE-JV-2]
Length = 149
Score = 77.0 bits (188), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 38/107 (35%), Positives = 66/107 (61%), Gaps = 3/107 (2%)
Query: 93 EYFMASAFLVAKRSKDPVTRVGAVIVNEDNKIVGTGYNGMPIGCSDDEFPWDKNTHDELD 152
+++ S + SKDP T+V A++++ ++ I+ GYNG+P G + + W K +
Sbjct: 6 KFYSLSCYHAQLFSKDPNTKVAAMVIDANHNILSVGYNGLPRGFEETQERWSKPEKYQY- 64
Query: 153 MCHAEMNAILN--KNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVI 197
+ HAE NAI +N A + ++LFPC++CA++IIQ+GIK+V+
Sbjct: 65 VVHAEANAICTAARNGAKLDGGSIVSTLFPCDQCARLIIQAGIKKVV 111
Score = 40.4 bits (93), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 15/34 (44%), Positives = 26/34 (76%)
Query: 7 KNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVI 40
+N A + ++LFPC++CA++IIQ+GIK+V+
Sbjct: 78 RNGAKLDGGSIVSTLFPCDQCARLIIQAGIKKVV 111
>gi|405983895|ref|ZP_11042200.1| hypothetical protein HMPREF9451_01313 [Slackia piriformis YIT
12062]
gi|404388710|gb|EJZ83792.1| hypothetical protein HMPREF9451_01313 [Slackia piriformis YIT
12062]
Length = 155
Score = 77.0 bits (188), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 45/119 (37%), Positives = 66/119 (55%), Gaps = 12/119 (10%)
Query: 91 WHEYFMASAFLVAKRSKDPVTRVGAVIVNEDNKIVGTGYNGMP--------IGCSDDEFP 142
W EYF+ AF VAKRS VGA+IV +D +I+ TGYNG+P GC ++
Sbjct: 11 WDEYFIHLAFEVAKRSTCLRRAVGAIIV-KDRRILATGYNGVPSGLRHCEETGCLREQLG 69
Query: 143 WDKNTHDEL-DMCHAEMNAILN--KNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIY 198
E+ HAE NAI+ + D + +Y + PC+ CAK++I +GIKE+++
Sbjct: 70 VPSGQRHEICRGLHAEQNAIIQAARYGIDIEGSSIYITTQPCSVCAKMLINAGIKEIVF 128
>gi|157693059|ref|YP_001487521.1| dCMP deaminase [Bacillus pumilus SAFR-032]
gi|157681817|gb|ABV62961.1| dCMP deaminase [Bacillus pumilus SAFR-032]
Length = 189
Score = 77.0 bits (188), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 50/119 (42%), Positives = 66/119 (55%), Gaps = 10/119 (8%)
Query: 89 LEWHEYFMASAFLVAKRSKDPVTRVGAVIVNEDNKIVGTGYNGMPIG---CSDDE-FPWD 144
+ W++YFMA + L+A RS VGA IV D +I+ GYNG G C+D + D
Sbjct: 4 ISWNQYFMAQSHLLALRSTCERLAVGATIVR-DKRIIAGGYNGSIAGDVHCADVGCYVID 62
Query: 145 KNTHDELDMCHAEMNAILN--KNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIYMCD 201
H + HAEMNAIL K A T ++Y + FPC +C K IIQ+GI+ V Y D
Sbjct: 63 ---HHCVRTIHAEMNAILQCAKFGAPTADAEIYVTHFPCLQCCKAIIQAGIRTVYYAKD 118
Score = 45.4 bits (106), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 31/76 (40%), Positives = 42/76 (55%), Gaps = 7/76 (9%)
Query: 1 MNAILN--KNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIYMCDKHKQKPATIASKRM 58
MNAIL K A T ++Y + FPC +C K IIQ+GI+ V Y D +K P I +
Sbjct: 73 MNAILQCAKFGAPTADAEIYVTHFPCLQCCKAIIQAGIRTVYYAKD-YKNHPYAI---DL 128
Query: 59 FDAAKVHYWS-EMDKM 73
F+ A V E+D+M
Sbjct: 129 FEQAGVQTEQVELDEM 144
>gi|347601559|gb|AEP16044.1| deoxycytidylate deaminase, partial [Emiliania huxleyi virus 208]
Length = 92
Score = 77.0 bits (188), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 34/60 (56%), Positives = 43/60 (71%), Gaps = 1/60 (1%)
Query: 87 DVLEWHEYFMASAFLVAKRSKDPVTRVGAVIV-NEDNKIVGTGYNGMPIGCSDDEFPWDK 145
D + W +YFM A L A RSKDP T+VG+ I+ + NKI+ GYNGMP GC+DD+FPW K
Sbjct: 10 DYISWDQYFMGVAKLSAMRSKDPSTQVGSCIIESTTNKIISIGYNGMPRGCNDDDFPWGK 69
>gi|227509437|ref|ZP_03939486.1| competence protein ComEB [Lactobacillus brevis subsp. gravesensis
ATCC 27305]
gi|227191149|gb|EEI71216.1| competence protein ComEB [Lactobacillus brevis subsp. gravesensis
ATCC 27305]
Length = 163
Score = 77.0 bits (188), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 47/123 (38%), Positives = 69/123 (56%), Gaps = 10/123 (8%)
Query: 83 KRVDDVLEWHEYFMASAFLVAKRSKDPVTRVGAVIVNEDNKIVGTGYNGMPIGCSDDEFP 142
+++D+ ++W +YFM A L+A RS VGAVIV D +I+ GYNG G D+
Sbjct: 4 EKMDNRIKWDQYFMMQAVLLASRSTCERLSVGAVIV-RDKRIIAGGYNGSVAG---DDHC 59
Query: 143 WDKNTHDELDMC----HAEMNAILN--KNSADTKRCKLYTSLFPCNECAKVIIQSGIKEV 196
D + C HAEMNAIL K T ++Y + FPC +C K+++Q+GIK +
Sbjct: 60 IDVGCYLVDGHCVRTIHAEMNAILQCAKFGESTDNAEIYVTDFPCLQCTKMLLQAGIKRI 119
Query: 197 IYM 199
Y+
Sbjct: 120 NYL 122
Score = 41.2 bits (95), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 20/53 (37%), Positives = 32/53 (60%), Gaps = 2/53 (3%)
Query: 1 MNAILN--KNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIYMCDKHKQKPA 51
MNAIL K T ++Y + FPC +C K+++Q+GIK + Y+ + H + A
Sbjct: 79 MNAILQCAKFGESTDNAEIYVTDFPCLQCTKMLLQAGIKRINYLRNYHNDEYA 131
>gi|406659749|ref|ZP_11067887.1| competence protein comEB [Streptococcus iniae 9117]
gi|405577858|gb|EKB52006.1| competence protein comEB [Streptococcus iniae 9117]
Length = 150
Score = 77.0 bits (188), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 46/117 (39%), Positives = 68/117 (58%), Gaps = 12/117 (10%)
Query: 89 LEWHEYFMASAFLVAKRSKDPVTRVGAVIVNEDNKIVGTGYNGMPIGCSDDEFPWDKNTH 148
L W +YFMA+A L++KRS VGAV+V +DN+I+ TGYNG + +D+ D+ H
Sbjct: 5 LSWQDYFMANAELISKRSTCDRAYVGAVLV-KDNRIIATGYNG-GVSATDN---CDQAGH 59
Query: 149 DELD-----MCHAEMNAILN--KNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIY 198
D HAEMNA++ K T ++Y + FPC C K ++Q+GI ++ Y
Sbjct: 60 YMEDGHCIRTVHAEMNALIQCAKEGISTDGTEIYVTHFPCINCTKALLQAGITKITY 116
>gi|414083508|ref|YP_006992216.1| comE operon protein 2 [Carnobacterium maltaromaticum LMA28]
gi|412997092|emb|CCO10901.1| comE operon protein 2 [Carnobacterium maltaromaticum LMA28]
Length = 144
Score = 77.0 bits (188), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 47/119 (39%), Positives = 68/119 (57%), Gaps = 10/119 (8%)
Query: 89 LEWHEYFMASAFLVAKRSKDPVTRVGAVIVNEDNKIVGTGYNGMPIG---CSDDE-FPWD 144
+ W +YFMA + L++ RS VGA IV D +I+ GYNG G C D+ + D
Sbjct: 5 IPWDQYFMAQSLLLSLRSTCTRLTVGATIV-RDKRIIAGGYNGSVTGDLHCIDEGCYIVD 63
Query: 145 KNTHDELDMCHAEMNAILN--KNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIYMCD 201
+ L HAEMNAIL K T+ ++Y + FPC +C K+I+Q+GIK++ Y+ D
Sbjct: 64 GHC---LRTIHAEMNAILQCAKFGVGTENAEIYVTHFPCLQCTKMILQAGIKKIHYLED 119
Score = 44.7 bits (104), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 21/48 (43%), Positives = 32/48 (66%), Gaps = 2/48 (4%)
Query: 1 MNAILN--KNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIYMCDKH 46
MNAIL K T+ ++Y + FPC +C K+I+Q+GIK++ Y+ D H
Sbjct: 74 MNAILQCAKFGVGTENAEIYVTHFPCLQCTKMILQAGIKKIHYLEDYH 121
>gi|332295432|ref|YP_004437355.1| dCMP deaminase [Thermodesulfobium narugense DSM 14796]
gi|332178535|gb|AEE14224.1| dCMP deaminase [Thermodesulfobium narugense DSM 14796]
Length = 152
Score = 77.0 bits (188), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 49/123 (39%), Positives = 63/123 (51%), Gaps = 12/123 (9%)
Query: 90 EWHEYFMASAFLVAKRSKDPVTRVGAVIVNEDNKIVGTGYNGMP--------IGCSDDEF 141
+W YFM AFLVA RS +VGAVIV E +I+ TGYNG P IGC D+
Sbjct: 4 DWDSYFMKIAFLVATRSTCIRRKVGAVIVKE-KRILSTGYNGAPSGLLHCLDIGCLRDKL 62
Query: 142 PWDKNTHDEL-DMCHAEMNAILNKN--SADTKRCKLYTSLFPCNECAKVIIQSGIKEVIY 198
EL HAE NAI+ +Y + PC CAK++IQ+GI +++Y
Sbjct: 63 NIPSGERQELCRGLHAEQNAIIQGAMYGVSLMGSTIYVTNQPCITCAKMLIQAGIVKIVY 122
Query: 199 MCD 201
D
Sbjct: 123 QGD 125
>gi|256851965|ref|ZP_05557352.1| ComE operon protein 2 [Lactobacillus jensenii 27-2-CHN]
gi|260661465|ref|ZP_05862378.1| ComE operon protein 2 [Lactobacillus jensenii 115-3-CHN]
gi|297205164|ref|ZP_06922560.1| competence protein ComEB [Lactobacillus jensenii JV-V16]
gi|256615377|gb|EEU20567.1| ComE operon protein 2 [Lactobacillus jensenii 27-2-CHN]
gi|260547920|gb|EEX23897.1| ComE operon protein 2 [Lactobacillus jensenii 115-3-CHN]
gi|297149742|gb|EFH30039.1| competence protein ComEB [Lactobacillus jensenii JV-V16]
Length = 160
Score = 77.0 bits (188), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 44/120 (36%), Positives = 67/120 (55%), Gaps = 12/120 (10%)
Query: 89 LEWHEYFMASAFLVAKRSKDPVTRVGAVIVNEDNKIVGTGYNGMPIGCSDDEFPWDKNTH 148
+ W++YFM A ++++RS VG+V+V +D +I+GTGYNG G + D H
Sbjct: 6 IPWNQYFMMQALVISQRSTCNRALVGSVLV-KDKRIIGTGYNGSVTG----QEHCDDVGH 60
Query: 149 DELD-----MCHAEMNAILN--KNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIYMCD 201
+D H+EMN ++ KN T ++Y + FPC C K +IQ+GIK+V Y D
Sbjct: 61 QMVDGHCIRTIHSEMNTLIQCAKNGVSTLDTEIYVTHFPCYNCTKALIQAGIKKVNYFFD 120
Score = 42.4 bits (98), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 20/48 (41%), Positives = 28/48 (58%), Gaps = 2/48 (4%)
Query: 1 MNAILN--KNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIYMCDKH 46
MN ++ KN T ++Y + FPC C K +IQ+GIK+V Y D H
Sbjct: 75 MNTLIQCAKNGVSTLDTEIYVTHFPCYNCTKALIQAGIKKVNYFFDYH 122
>gi|289550640|ref|YP_003471544.1| dCMP deaminase [Staphylococcus lugdunensis HKU09-01]
gi|315658135|ref|ZP_07911007.1| ComE operon protein comEB [Staphylococcus lugdunensis M23590]
gi|385784268|ref|YP_005760441.1| putative deaminase [Staphylococcus lugdunensis N920143]
gi|418413944|ref|ZP_12987160.1| ComE operon protein 2 [Staphylococcus lugdunensis ACS-027-V-Sch2]
gi|418637120|ref|ZP_13199450.1| ComE operon protein 2 [Staphylococcus lugdunensis VCU139]
gi|289180172|gb|ADC87417.1| dCMP deaminase ; Late competence protein ComEB [Staphylococcus
lugdunensis HKU09-01]
gi|315496464|gb|EFU84787.1| ComE operon protein comEB [Staphylococcus lugdunensis M23590]
gi|339894524|emb|CCB53805.1| putative deaminase [Staphylococcus lugdunensis N920143]
gi|374839810|gb|EHS03318.1| ComE operon protein 2 [Staphylococcus lugdunensis VCU139]
gi|410877582|gb|EKS25474.1| ComE operon protein 2 [Staphylococcus lugdunensis ACS-027-V-Sch2]
Length = 153
Score = 77.0 bits (188), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 48/117 (41%), Positives = 64/117 (54%), Gaps = 6/117 (5%)
Query: 89 LEWHEYFMASAFLVAKRSKDPVTRVGAVIVNEDNKIVGTGYNGMPIGCSD--DEFPWDKN 146
++W EYFMA + L+A RS VGA IV +DN+I+ GYNG G DE ++
Sbjct: 4 IKWEEYFMAQSHLLALRSTCQRLSVGATIV-KDNRIIAGGYNGSVAGEVHCIDEGCLIED 62
Query: 147 THDELDMCHAEMNAILN--KNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIYMCD 201
H + HAEMNA+L K T+ +Y + FPC C K IIQ+GI + Y D
Sbjct: 63 GHC-IRTIHAEMNALLQCAKQGVSTEGATIYVTHFPCLNCTKSIIQAGITTIYYAQD 118
Score = 44.7 bits (104), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 24/68 (35%), Positives = 34/68 (50%), Gaps = 6/68 (8%)
Query: 1 MNAILN--KNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIYMCDKHKQKPATIASKRM 58
MNA+L K T+ +Y + FPC C K IIQ+GI + Y D H + A R+
Sbjct: 73 MNALLQCAKQGVSTEGATIYVTHFPCLNCTKSIIQAGITTIYYAQDYHNHEYAI----RL 128
Query: 59 FDAAKVHY 66
D + + Y
Sbjct: 129 LDQSGITY 136
>gi|15675651|ref|NP_269825.1| DNA-binding late competence protein [Streptococcus pyogenes SF370]
gi|19746757|ref|NP_607893.1| late competence protein [Streptococcus pyogenes MGAS8232]
gi|21911111|ref|NP_665379.1| late competence protein required for DNA binding [Streptococcus
pyogenes MGAS315]
gi|28895204|ref|NP_801554.1| late competence protein required for DNA binding [Streptococcus
pyogenes SSI-1]
gi|71911361|ref|YP_282911.1| competence protein ComE [Streptococcus pyogenes MGAS5005]
gi|139473178|ref|YP_001127893.1| cytidine and deoxycytidylate deaminase [Streptococcus pyogenes str.
Manfredo]
gi|209559918|ref|YP_002286390.1| late competence protein required for DNA binding [Streptococcus
pyogenes NZ131]
gi|383480519|ref|YP_005389413.1| dCMP deaminase/late competence protein ComEB [Streptococcus
pyogenes MGAS15252]
gi|383494500|ref|YP_005412176.1| dCMP deaminase/late competence protein ComEB [Streptococcus
pyogenes MGAS1882]
gi|386363338|ref|YP_006072669.1| putative deoxycytidylate deaminase [Streptococcus pyogenes Alab49]
gi|410681215|ref|YP_006933617.1| deoxycytidylate deaminase [Streptococcus pyogenes A20]
gi|417856271|ref|ZP_12501330.1| ComE operon protein 2 [Streptococcus pyogenes HKU QMH11M0907901]
gi|13622863|gb|AAK34546.1| putative late competence protein required for DNA binding
[Streptococcus pyogenes M1 GAS]
gi|19748988|gb|AAL98392.1| putative late competence protein [Streptococcus pyogenes MGAS8232]
gi|21905321|gb|AAM80182.1| putative late competence protein required for DNA binding
[Streptococcus pyogenes MGAS315]
gi|28810450|dbj|BAC63387.1| putative late competence protein required for DNA binding
[Streptococcus pyogenes SSI-1]
gi|71854143|gb|AAZ52166.1| comE operon protein 2 [Streptococcus pyogenes MGAS5005]
gi|134271424|emb|CAM29644.1| putative cytidine and deoxycytidylate deaminase [Streptococcus
pyogenes str. Manfredo]
gi|209541119|gb|ACI61695.1| Putative late competence protein required for DNA binding
[Streptococcus pyogenes NZ131]
gi|350277747|gb|AEQ25115.1| putative deoxycytidylate deaminase [Streptococcus pyogenes Alab49]
gi|378928509|gb|AFC66715.1| dCMP deaminase/late competence protein ComEB [Streptococcus
pyogenes MGAS15252]
gi|378930227|gb|AFC68644.1| dCMP deaminase/late competence protein ComEB [Streptococcus
pyogenes MGAS1882]
gi|387933226|gb|EIK41339.1| ComE operon protein 2 [Streptococcus pyogenes HKU QMH11M0907901]
gi|395454603|dbj|BAM30942.1| competence protein [Streptococcus pyogenes M1 476]
gi|409693804|gb|AFV38664.1| putative deoxycytidylate deaminase [Streptococcus pyogenes A20]
Length = 153
Score = 77.0 bits (188), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 46/116 (39%), Positives = 67/116 (57%), Gaps = 10/116 (8%)
Query: 89 LEWHEYFMASAFLVAKRSKDPVTRVGAVIVNEDNKIVGTGYNGMPIGCSDDEFPWDKNTH 148
L W +YFMA+A L++KRS VGAV+V +DN+I+ TGYNG G S + + +
Sbjct: 5 LSWQDYFMANAELISKRSTCDRAFVGAVLV-KDNRIIATGYNG---GVSATDNCNEAGHY 60
Query: 149 DELDMC----HAEMNAILN--KNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIY 198
E C HAEMNA++ K T ++Y + FPC C K ++Q+GI ++ Y
Sbjct: 61 MEDGHCIRTVHAEMNALIQCAKEGISTDGTEIYVTHFPCINCTKALLQAGITKITY 116
>gi|94544632|gb|ABF34680.1| ComE operon protein 2 [Streptococcus pyogenes MGAS10270]
Length = 170
Score = 77.0 bits (188), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 46/116 (39%), Positives = 67/116 (57%), Gaps = 10/116 (8%)
Query: 89 LEWHEYFMASAFLVAKRSKDPVTRVGAVIVNEDNKIVGTGYNGMPIGCSDDEFPWDKNTH 148
L W +YFMA+A L++KRS VGAV+V +DN+I+ TGYNG G S + + +
Sbjct: 20 LSWQDYFMANAELISKRSTCDRAFVGAVLV-KDNRIIATGYNG---GVSATDNCNEAGHY 75
Query: 149 DELDMC----HAEMNAILN--KNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIY 198
E C HAEMNA++ K T ++Y + FPC C K ++Q+GI ++ Y
Sbjct: 76 MEDGHCIRTVHAEMNALIQCAKEGISTDGTEIYVTHFPCINCTKALLQAGITKITY 131
>gi|407068777|ref|ZP_11099615.1| deoxycytidylate deaminase [Vibrio cyclitrophicus ZF14]
Length = 147
Score = 77.0 bits (188), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 47/109 (43%), Positives = 58/109 (53%), Gaps = 3/109 (2%)
Query: 88 VLEWHEYFMASAFLVAKRSKDPVTRVGAVIVNEDNKIVGTGYNGMPIGCSDDEFPWDKNT 147
+ +W + F A LV SKDP T+VGAVI N+IV G+NG P G SD D
Sbjct: 2 ISKWAKRFYQMAELVGSWSKDPSTQVGAVITKH-NRIVSVGFNGYPHGVSDSADT-DDRE 59
Query: 148 HDELDMCHAEMNAILNKNSADTKRCKLYTSLFPCNECAKVIIQSGIKEV 196
L HAE NAIL D C+++ + FPC CA IIQ+GI V
Sbjct: 60 MKYLKTLHAEENAILFAKR-DLDSCEIWVTHFPCPNCAAKIIQTGISAV 107
>gi|58336551|ref|YP_193136.1| dCMP deaminase [Lactobacillus acidophilus NCFM]
gi|227903102|ref|ZP_04020907.1| competence protein ComEB [Lactobacillus acidophilus ATCC 4796]
gi|58253868|gb|AAV42105.1| DCMP deaminase [Lactobacillus acidophilus NCFM]
gi|227869088|gb|EEJ76509.1| competence protein ComEB [Lactobacillus acidophilus ATCC 4796]
Length = 159
Score = 77.0 bits (188), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 46/122 (37%), Positives = 69/122 (56%), Gaps = 12/122 (9%)
Query: 87 DVLEWHEYFMASAFLVAKRSKDPVTRVGAVIVNEDNKIVGTGYNGMPIGCSDDEFPWDKN 146
D + W +YFM A ++A+RS VG+V+V +DN+I+GTGYNG G + D+
Sbjct: 3 DRIPWKQYFMMQALVIAQRSTCNRALVGSVLV-KDNRIIGTGYNGSVSG----QPHCDEV 57
Query: 147 THDELD-----MCHAEMNAILN--KNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIYM 199
H +D H+EMNAI+ K T ++Y + FPC C K ++Q+GIK++ Y
Sbjct: 58 GHQMVDGHCVRTIHSEMNAIIQCAKFGVSTDGTEIYVTHFPCYNCCKSLLQAGIKKINYY 117
Query: 200 CD 201
D
Sbjct: 118 FD 119
Score = 37.4 bits (85), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 23/74 (31%), Positives = 40/74 (54%), Gaps = 5/74 (6%)
Query: 1 MNAILN--KNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIYMCDKHKQKPATIASKRM 58
MNAI+ K T ++Y + FPC C K ++Q+GIK++ Y D ++ P +A K +
Sbjct: 74 MNAIIQCAKFGVSTDGTEIYVTHFPCYNCCKSLLQAGIKKINYYFD-YRDNP--LAMKLL 130
Query: 59 FDAAKVHYWSEMDK 72
D + ++D+
Sbjct: 131 HDCGVPYEQIKIDR 144
>gi|335047703|ref|ZP_08540724.1| putative ComE operon protein 2 [Parvimonas sp. oral taxon 110 str.
F0139]
gi|333761511|gb|EGL39066.1| putative ComE operon protein 2 [Parvimonas sp. oral taxon 110 str.
F0139]
Length = 141
Score = 77.0 bits (188), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 44/111 (39%), Positives = 58/111 (52%), Gaps = 3/111 (2%)
Query: 91 WHEYFMASAFLVAKRSKDPVTRVGAVIVNEDNKIVGTGYNGMPIGCSD-DEFPWDKNTHD 149
W+EYFM A +VA R VG V+VN+DN+I+ TGYNG G DE
Sbjct: 5 WNEYFMDLAKMVATRGTCDRAYVGCVLVNKDNRIISTGYNGSISGNPQCDEIGHTMRDGH 64
Query: 150 ELDMCHAEMNAIL--NKNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIY 198
+ HAE NA+L + K C Y + FPC C K +IQ+GI ++ Y
Sbjct: 65 CIATIHAEQNALLYCAREGIKVKGCTCYVTHFPCLNCTKALIQAGISKIYY 115
>gi|282875983|ref|ZP_06284850.1| ComE operon protein 2 [Staphylococcus epidermidis SK135]
gi|281295008|gb|EFA87535.1| ComE operon protein 2 [Staphylococcus epidermidis SK135]
Length = 153
Score = 77.0 bits (188), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 48/117 (41%), Positives = 64/117 (54%), Gaps = 6/117 (5%)
Query: 89 LEWHEYFMASAFLVAKRSKDPVTRVGAVIVNEDNKIVGTGYNGMPIGCSD--DEFPWDKN 146
++W EYFMA + L+A RS VGA IV +DN+I+ GYNG G DE ++
Sbjct: 4 IKWEEYFMAQSHLLALRSTCKRLSVGATIV-KDNRIIAGGYNGSVAGEVHCIDEGCLIED 62
Query: 147 THDELDMCHAEMNAILN--KNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIYMCD 201
H + HAEMN +L K T+ +Y + FPC C K IIQ+GIK + Y D
Sbjct: 63 GHC-IRTIHAEMNTLLQCAKQGVSTEGATIYVTHFPCLNCTKSIIQAGIKTIYYAQD 118
Score = 41.2 bits (95), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 21/53 (39%), Positives = 27/53 (50%), Gaps = 2/53 (3%)
Query: 1 MNAILN--KNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIYMCDKHKQKPA 51
MN +L K T+ +Y + FPC C K IIQ+GIK + Y D H A
Sbjct: 73 MNTLLQCAKQGVSTEGATIYVTHFPCLNCTKSIIQAGIKTIYYAQDYHNHDYA 125
>gi|343520362|ref|ZP_08757331.1| cytidine and deoxycytidylate deaminase zinc-binding region
[Parvimonas sp. oral taxon 393 str. F0440]
gi|343397320|gb|EGV09854.1| cytidine and deoxycytidylate deaminase zinc-binding region
[Parvimonas sp. oral taxon 393 str. F0440]
Length = 141
Score = 77.0 bits (188), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 44/111 (39%), Positives = 58/111 (52%), Gaps = 3/111 (2%)
Query: 91 WHEYFMASAFLVAKRSKDPVTRVGAVIVNEDNKIVGTGYNGMPIGCSD-DEFPWDKNTHD 149
W+EYFM A +VA R VG V+VN+DN+I+ TGYNG G DE
Sbjct: 5 WNEYFMDLAKMVATRGTCDRAYVGCVLVNKDNRIISTGYNGSISGNPQCDEIGHTMRDGH 64
Query: 150 ELDMCHAEMNAIL--NKNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIY 198
+ HAE NA+L + K C Y + FPC C K +IQ+GI ++ Y
Sbjct: 65 CIATIHAEQNALLYCAREGIKVKGCTCYVTHFPCLNCTKALIQAGISKIYY 115
>gi|340383812|ref|XP_003390410.1| PREDICTED: hypothetical protein LOC100635083 [Amphimedon
queenslandica]
Length = 498
Score = 77.0 bits (188), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 71/236 (30%), Positives = 114/236 (48%), Gaps = 31/236 (13%)
Query: 1 MNAILNKNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIY-MCDKHKQKPATI-----A 54
+NAI +K S + C +Y + P +C + II++ IK+++Y M +H +
Sbjct: 237 VNAIASKPSESIEGCTIYLTHCPDKDCVQAIIKAKIKKIVYCMFTRHDEYERETEDDMEV 296
Query: 55 SKRMFD--AAKVHYWSEMD-----------------KMNGVQNGSPHKRVDDVLEWHEYF 95
+K++ + A K+ + + K N + P + D + W +F
Sbjct: 297 AKKILERNAVKIRKFKNENAGGQLKDRIDRIRPRYTKKNKDECKWPTESAKDFIPWETFF 356
Query: 96 MASAFLVAKRSKDPVTRVGAVIVNEDNKIVGTGYNGMPIGCSDDEFPWDKNTHDELD--M 153
M A L +RS +VGA +V+ +++ GYN P +E +K ++E +
Sbjct: 357 MEIALLSKERSAHSEYQVGACVVSPKKQVLAVGYNAYPEDMIHEETEDEKKDNEEESEYI 416
Query: 154 CHAEMNAILNKNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIYMCD---KQMSY 206
HAE AIL S + C LY + +PC+ CAKVI+QSGI+EVIY D KQ SY
Sbjct: 417 SHAEYKAILG-ISPSVQGCTLYVTQYPCHMCAKVIVQSGIREVIYDEDGGWKQPSY 471
Score = 75.1 bits (183), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 48/120 (40%), Positives = 72/120 (60%), Gaps = 11/120 (9%)
Query: 90 EWHEYFMASAFLVAKRSKDPVTRVGAVIVNEDN-KIVGTGYNGMPI---GCSDDEFPWDK 145
EW EY+M A L A RSKDP T VGA I + ++ ++VG GYN MP G +D FPW
Sbjct: 158 EWDEYYMNIACLAALRSKDPSTPVGACIADTESCQVVGIGYNSMPYVEGGNNDKIFPWKG 217
Query: 146 NTHDELD-------MCHAEMNAILNKNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIY 198
+T D+++ + HA +NAI +K S + C +Y + P +C + II++ IK+++Y
Sbjct: 218 STTDKINPELKYPYVVHAAVNAIASKPSESIEGCTIYLTHCPDKDCVQAIIKAKIKKIVY 277
Score = 53.1 bits (126), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 23/51 (45%), Positives = 36/51 (70%)
Query: 9 SADTKRCKLYTSLFPCNECAKVIIQSGIKEVIYMCDKHKQKPATIASKRMF 59
S + C LY + +PC+ CAKVI+QSGI+EVIY D ++P+ I+S+++
Sbjct: 428 SPSVQGCTLYVTQYPCHMCAKVIVQSGIREVIYDEDGGWKQPSYISSRKIL 478
>gi|365857733|ref|ZP_09397719.1| cytidine and deoxycytidylate deaminase zinc-binding region
[Acetobacteraceae bacterium AT-5844]
gi|363715665|gb|EHL99091.1| cytidine and deoxycytidylate deaminase zinc-binding region
[Acetobacteraceae bacterium AT-5844]
Length = 193
Score = 77.0 bits (188), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 43/127 (33%), Positives = 67/127 (52%), Gaps = 7/127 (5%)
Query: 79 GSPHKRVDDVLEWHEYFMASAFLVAKRSKDPVTRVGAVIVNED-NKIVGTGYNGMPIGCS 137
G P K+ +W ++ A +++ SKDP +VGAV+VN+ +IV TG+NG P
Sbjct: 9 GRPEKQA----KWDRRYLGLAHYISQWSKDPRAKVGAVLVNQRYARIVATGFNGFPSNVE 64
Query: 138 DDEFPWDKNTHDELDMCHAEMNAILNKNSADTKRCKLYTSLFP-CNECAKVIIQSGIKEV 196
D T + HAE NA+L+ D + C +Y P CN CA ++IQSG++ V
Sbjct: 65 DSAERLQNKTQKLQMILHAEQNALLHAGR-DARECDVYVVGKPVCNVCATLLIQSGVRRV 123
Query: 197 IYMCDKQ 203
+ ++
Sbjct: 124 VAAAPRR 130
>gi|228477298|ref|ZP_04061936.1| ComE operon protein 2 [Streptococcus salivarius SK126]
gi|340399619|ref|YP_004728644.1| putative dCMP deaminase [Streptococcus salivarius CCHSS3]
gi|387760572|ref|YP_006067549.1| ComE operon protein 2 [Streptococcus salivarius 57.I]
gi|387784864|ref|YP_006070947.1| late competence protein required for DNA binding and uptake
[Streptococcus salivarius JIM8777]
gi|418018612|ref|ZP_12658168.1| putative dCMP deaminase [Streptococcus salivarius M18]
gi|228251317|gb|EEK10488.1| ComE operon protein 2 [Streptococcus salivarius SK126]
gi|338743612|emb|CCB94122.1| putative dCMP deaminase [Streptococcus salivarius CCHSS3]
gi|338745746|emb|CCB96112.1| late competence protein required for DNA binding and uptake
[Streptococcus salivarius JIM8777]
gi|339291339|gb|AEJ52686.1| ComE operon protein 2 [Streptococcus salivarius 57.I]
gi|345527461|gb|EGX30772.1| putative dCMP deaminase [Streptococcus salivarius M18]
Length = 151
Score = 77.0 bits (188), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 46/116 (39%), Positives = 68/116 (58%), Gaps = 10/116 (8%)
Query: 89 LEWHEYFMASAFLVAKRSKDPVTRVGAVIVNEDNKIVGTGYNGMPIGCSDDEFPWDKNTH 148
L W +YFMA+A L++KRS VGAV+V +D +I+ TGYNG G S+ + + +
Sbjct: 5 LSWQDYFMANAELISKRSTCDRAFVGAVLV-KDKRIIATGYNG---GVSETDNCNEVGHY 60
Query: 149 DELDMC----HAEMNAILN--KNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIY 198
E C HAEMNA++ K TK ++Y + FPC C K ++Q+GI ++ Y
Sbjct: 61 MEDGHCIRTVHAEMNALIQCAKEGISTKNTEIYVTHFPCINCTKALLQAGIVKITY 116
Score = 37.7 bits (86), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 20/60 (33%), Positives = 32/60 (53%), Gaps = 5/60 (8%)
Query: 1 MNAILN--KNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIYMCDKHKQKPATIASKRM 58
MNA++ K TK ++Y + FPC C K ++Q+GI ++ Y K +P A + M
Sbjct: 74 MNALIQCAKEGISTKNTEIYVTHFPCINCTKALLQAGIVKITY---KANYRPHPFAIELM 130
>gi|392531850|ref|ZP_10278987.1| comE operon protein 2 [Carnobacterium maltaromaticum ATCC 35586]
Length = 159
Score = 77.0 bits (188), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 47/119 (39%), Positives = 68/119 (57%), Gaps = 10/119 (8%)
Query: 89 LEWHEYFMASAFLVAKRSKDPVTRVGAVIVNEDNKIVGTGYNGMPIG---CSDDE-FPWD 144
+ W +YFMA + L++ RS VGA IV D +I+ GYNG G C D+ + D
Sbjct: 4 IPWDQYFMAQSLLLSLRSTCTRLTVGATIV-RDKRIIAGGYNGSVTGDLHCIDEGCYIVD 62
Query: 145 KNTHDELDMCHAEMNAILN--KNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIYMCD 201
+ L HAEMNAIL K T+ ++Y + FPC +C K+I+Q+GIK++ Y+ D
Sbjct: 63 GHC---LRTIHAEMNAILQCAKFGVGTENAEIYVTHFPCLQCTKMILQAGIKKIHYLED 118
Score = 47.4 bits (111), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 29/89 (32%), Positives = 47/89 (52%), Gaps = 15/89 (16%)
Query: 1 MNAILN--KNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIYMCDKHKQKPATIASKRM 58
MNAIL K T+ ++Y + FPC +C K+I+Q+GIK++ Y+ D H A ++
Sbjct: 73 MNAILQCAKFGVGTENAEIYVTHFPCLQCTKMILQAGIKKIHYLEDYHNDPYAI----KL 128
Query: 59 FDAAKVH---------YWSEMDKMNGVQN 78
+ A V Y++++D NG N
Sbjct: 129 IEQAHVQCQKVTLSNEYFAQLDFGNGKNN 157
>gi|421892438|ref|ZP_16323095.1| dCMP deaminase; Late competence protein ComEB [Streptococcus
pyogenes NS88.2]
gi|379981786|emb|CCG26817.1| dCMP deaminase; Late competence protein ComEB [Streptococcus
pyogenes NS88.2]
Length = 155
Score = 77.0 bits (188), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 46/116 (39%), Positives = 67/116 (57%), Gaps = 10/116 (8%)
Query: 89 LEWHEYFMASAFLVAKRSKDPVTRVGAVIVNEDNKIVGTGYNGMPIGCSDDEFPWDKNTH 148
L W +YFMA+A L++KRS VGAV+V +DN+I+ TGYNG G S + + +
Sbjct: 5 LSWQDYFMANAELISKRSTCDRAFVGAVLV-KDNRIIATGYNG---GVSATDNCNEAGHY 60
Query: 149 DELDMC----HAEMNAILN--KNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIY 198
E C HAEMNA++ K T ++Y + FPC C K ++Q+GI ++ Y
Sbjct: 61 MEDGHCIRTVHAEMNALIQCAKEGISTDGTEIYVTHFPCINCTKALLQAGITKITY 116
>gi|160947203|ref|ZP_02094370.1| hypothetical protein PEPMIC_01136 [Parvimonas micra ATCC 33270]
gi|158446337|gb|EDP23332.1| cytidine and deoxycytidylate deaminase zinc-binding region
[Parvimonas micra ATCC 33270]
Length = 141
Score = 77.0 bits (188), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 44/111 (39%), Positives = 57/111 (51%), Gaps = 3/111 (2%)
Query: 91 WHEYFMASAFLVAKRSKDPVTRVGAVIVNEDNKIVGTGYNGMPIGCSD-DEFPWDKNTHD 149
W EYFM A +VA R VG V+VN+DN+I+ TGYNG G DE
Sbjct: 5 WEEYFMDLAKMVATRGTCDRAYVGCVLVNKDNRIISTGYNGSISGNPQCDEIGHTMRDGH 64
Query: 150 ELDMCHAEMNAIL--NKNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIY 198
+ HAE NA+L + K C Y + FPC C K +IQ+GI ++ Y
Sbjct: 65 CIATIHAEQNALLYCAREGIKVKGCTCYVTHFPCLNCTKALIQAGISKIYY 115
>gi|84385224|ref|ZP_00988256.1| putative deoxycytidylate deaminase [Vibrio splendidus 12B01]
gi|86145748|ref|ZP_01064077.1| putative deoxycytidylate deaminase [Vibrio sp. MED222]
gi|218676904|ref|YP_002395723.1| deoxycytidylate deaminase [Vibrio splendidus LGP32]
gi|84379821|gb|EAP96672.1| putative deoxycytidylate deaminase [Vibrio splendidus 12B01]
gi|85836447|gb|EAQ54576.1| putative deoxycytidylate deaminase [Vibrio sp. MED222]
gi|218325172|emb|CAV27073.1| putative deoxycytidylate deaminase [Vibrio splendidus LGP32]
Length = 147
Score = 76.6 bits (187), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 47/109 (43%), Positives = 58/109 (53%), Gaps = 3/109 (2%)
Query: 88 VLEWHEYFMASAFLVAKRSKDPVTRVGAVIVNEDNKIVGTGYNGMPIGCSDDEFPWDKNT 147
+ +W + F A LV SKDP T+VGAVI N+IV G+NG P G SD D
Sbjct: 2 ISKWAKRFYQMAELVGSWSKDPSTQVGAVITKH-NRIVSVGFNGYPHGVSDSADT-DDRE 59
Query: 148 HDELDMCHAEMNAILNKNSADTKRCKLYTSLFPCNECAKVIIQSGIKEV 196
L HAE NAIL D C+++ + FPC CA IIQ+GI V
Sbjct: 60 MKYLKTLHAEENAILFAKR-DLDSCEVWVTHFPCPNCAAKIIQTGISAV 107
>gi|421453179|ref|ZP_15902535.1| ComE operon protein 2 [Streptococcus salivarius K12]
gi|400181488|gb|EJO15755.1| ComE operon protein 2 [Streptococcus salivarius K12]
Length = 156
Score = 76.6 bits (187), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 46/116 (39%), Positives = 68/116 (58%), Gaps = 10/116 (8%)
Query: 89 LEWHEYFMASAFLVAKRSKDPVTRVGAVIVNEDNKIVGTGYNGMPIGCSDDEFPWDKNTH 148
L W +YFMA+A L++KRS VGAV+V +D +I+ TGYNG G S+ + + +
Sbjct: 10 LSWQDYFMANAELISKRSTCNRAFVGAVLV-KDKRIIATGYNG---GVSETDNCNEVGHY 65
Query: 149 DELDMC----HAEMNAILN--KNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIY 198
E C HAEMNA++ K TK ++Y + FPC C K ++Q+GI ++ Y
Sbjct: 66 MEDGHCIRTVHAEMNALIQCAKEGISTKNTEIYVTHFPCINCTKALLQAGIVKITY 121
Score = 37.7 bits (86), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 20/60 (33%), Positives = 32/60 (53%), Gaps = 5/60 (8%)
Query: 1 MNAILN--KNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIYMCDKHKQKPATIASKRM 58
MNA++ K TK ++Y + FPC C K ++Q+GI ++ Y K +P A + M
Sbjct: 79 MNALIQCAKEGISTKNTEIYVTHFPCINCTKALLQAGIVKITY---KANYRPHPFAIELM 135
>gi|331701117|ref|YP_004398076.1| ComE operon protein 2 [Lactobacillus buchneri NRRL B-30929]
gi|406026613|ref|YP_006725445.1| competence protein ComEB [Lactobacillus buchneri CD034]
gi|329128460|gb|AEB73013.1| ComE operon protein 2 [Lactobacillus buchneri NRRL B-30929]
gi|405125102|gb|AFR99862.1| competence protein ComEB [Lactobacillus buchneri CD034]
Length = 158
Score = 76.6 bits (187), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 47/121 (38%), Positives = 67/121 (55%), Gaps = 10/121 (8%)
Query: 85 VDDVLEWHEYFMASAFLVAKRSKDPVTRVGAVIVNEDNKIVGTGYNGMPIGCSDDEFPWD 144
+D ++W +YFM A L+A RS VGAVIV D +I+ GYNG G D+ D
Sbjct: 1 MDKRIKWDQYFMMQAVLLASRSTCERLSVGAVIV-RDKRIIAGGYNGSVAG---DDHCID 56
Query: 145 KNTHDELDMC----HAEMNAILN--KNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIY 198
+ E C HAEMNAIL K T ++Y + FPC +C K+++Q+GI ++ Y
Sbjct: 57 VGCYLEDGHCVRTIHAEMNAILQCAKFGESTDNAEIYVTDFPCLQCTKMLLQAGITKINY 116
Query: 199 M 199
+
Sbjct: 117 L 117
Score = 38.9 bits (89), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 19/53 (35%), Positives = 31/53 (58%), Gaps = 2/53 (3%)
Query: 1 MNAILN--KNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIYMCDKHKQKPA 51
MNAIL K T ++Y + FPC +C K+++Q+GI ++ Y+ + H A
Sbjct: 74 MNAILQCAKFGESTDNAEIYVTDFPCLQCTKMLLQAGITKINYLRNYHNNDYA 126
>gi|444380051|ref|ZP_21179218.1| dCMP deaminase [Enterovibrio sp. AK16]
gi|443675872|gb|ELT82586.1| dCMP deaminase [Enterovibrio sp. AK16]
Length = 152
Score = 76.6 bits (187), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 47/109 (43%), Positives = 59/109 (54%), Gaps = 3/109 (2%)
Query: 88 VLEWHEYFMASAFLVAKRSKDPVTRVGAVIVNEDNKIVGTGYNGMPIGCSDDEFPWDKNT 147
+ +W F A LV SKDP T+VGAVI + N+IV G+NG P G SD D
Sbjct: 2 ISKWAVRFYQMAELVGSWSKDPSTQVGAVI-TKGNRIVSVGFNGYPHGISDSADT-DDRE 59
Query: 148 HDELDMCHAEMNAILNKNSADTKRCKLYTSLFPCNECAKVIIQSGIKEV 196
L HAE NAIL D C+++ + FPC CA IIQ+GI +V
Sbjct: 60 MKLLKTLHAEENAILFAKR-DLADCEIWVTHFPCPNCAAKIIQTGITQV 107
>gi|297585163|ref|YP_003700943.1| CMP/dCMP deaminase zinc-binding protein [Bacillus selenitireducens
MLS10]
gi|297143620|gb|ADI00378.1| CMP/dCMP deaminase zinc-binding protein [Bacillus selenitireducens
MLS10]
Length = 175
Score = 76.6 bits (187), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 48/130 (36%), Positives = 67/130 (51%), Gaps = 21/130 (16%)
Query: 90 EWHEYFMASAFLVAKRSKDPVTRVGAVIVNEDNK----IVGTGYNGMPIG---CSDDEFP 142
+W +YFM+ A++ + RS RVGAVIVN +K I+ TGYNG P G C D P
Sbjct: 21 DWEQYFMSKAYIASLRSTCGSRRVGAVIVNSLDKDKRNILSTGYNGYPSGQPHCVDGGCP 80
Query: 143 ----------WDKNTHDEL--DMCHAEMNAI--LNKNSADTKRCKLYTSLFPCNECAKVI 188
DE D HAE NA+ + + T+ C L+++ FPC +CA+ I
Sbjct: 81 RFEAKKQGLIQSGEYQDEYPCDAFHAEANAMFQMQRRGISTEGCVLFSTTFPCRQCAEKI 140
Query: 189 IQSGIKEVIY 198
+GI+ V Y
Sbjct: 141 NGAGIRSVYY 150
>gi|184155085|ref|YP_001843425.1| competence protein [Lactobacillus fermentum IFO 3956]
gi|227514789|ref|ZP_03944838.1| competence protein ComEB [Lactobacillus fermentum ATCC 14931]
gi|260663629|ref|ZP_05864518.1| ComE operon protein 2 [Lactobacillus fermentum 28-3-CHN]
gi|183226429|dbj|BAG26945.1| competence protein [Lactobacillus fermentum IFO 3956]
gi|227086837|gb|EEI22149.1| competence protein ComEB [Lactobacillus fermentum ATCC 14931]
gi|260551855|gb|EEX24970.1| ComE operon protein 2 [Lactobacillus fermentum 28-3-CHN]
Length = 159
Score = 76.6 bits (187), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 48/123 (39%), Positives = 66/123 (53%), Gaps = 14/123 (11%)
Query: 83 KRVDDVLEWHEYFMASAFLVAKRSKDPVTRVGAVIVNEDNKIVGTGYNGMPIGCSDDEFP 142
KR+D W +YFM A L+A RS VGAV+V D +I+G+GYNG G DE
Sbjct: 3 KRID----WDQYFMVQAALLASRSTCTRLSVGAVLV-RDKRIIGSGYNGAVAG---DEHC 54
Query: 143 WDKNTHDELDMC----HAEMNAILN--KNSADTKRCKLYTSLFPCNECAKVIIQSGIKEV 196
D + C HAEMNA+L K T +Y + FPC +C K ++Q+GI ++
Sbjct: 55 IDVGCYLRDGHCVRTIHAEMNALLQCAKFGTSTDGAMVYVTDFPCLQCTKSLLQAGITQI 114
Query: 197 IYM 199
Y+
Sbjct: 115 NYL 117
Score = 36.6 bits (83), Expect = 6.0, Method: Compositional matrix adjust.
Identities = 18/53 (33%), Positives = 29/53 (54%), Gaps = 2/53 (3%)
Query: 1 MNAILN--KNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIYMCDKHKQKPA 51
MNA+L K T +Y + FPC +C K ++Q+GI ++ Y+ + H A
Sbjct: 74 MNALLQCAKFGTSTDGAMVYVTDFPCLQCTKSLLQAGITQINYLRNYHNDDYA 126
>gi|138896089|ref|YP_001126542.1| late competence protein ComEB [Geobacillus thermodenitrificans
NG80-2]
gi|196248983|ref|ZP_03147683.1| ComE operon protein 2 [Geobacillus sp. G11MC16]
gi|134267602|gb|ABO67797.1| Late competence protein ComEB [Geobacillus thermodenitrificans
NG80-2]
gi|196211859|gb|EDY06618.1| ComE operon protein 2 [Geobacillus sp. G11MC16]
Length = 155
Score = 76.6 bits (187), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 49/117 (41%), Positives = 64/117 (54%), Gaps = 6/117 (5%)
Query: 89 LEWHEYFMASAFLVAKRSKDPVTRVGAVIVNEDNKIVGTGYNGMPIGCSD--DEFPWDKN 146
+ W +YFMA + L+A RS VGA IV D +I+ GYNG G + DE + +
Sbjct: 4 MTWDQYFMAQSHLLALRSTCTRLAVGATIV-RDKRIIAGGYNGSIAGGAHCIDEGCYVID 62
Query: 147 THDELDMCHAEMNAILN--KNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIYMCD 201
H + HAEMNAIL K T+ ++Y + FPC C K IIQSGI+ V Y D
Sbjct: 63 GHC-VRTIHAEMNAILQCAKFGVPTEGAEMYVTHFPCLHCCKAIIQSGIRAVYYAQD 118
Score = 42.7 bits (99), Expect = 0.091, Method: Compositional matrix adjust.
Identities = 27/66 (40%), Positives = 35/66 (53%), Gaps = 6/66 (9%)
Query: 1 MNAILN--KNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIYMCDKHKQKPATIASKRM 58
MNAIL K T+ ++Y + FPC C K IIQSGI+ V Y D +K P + +
Sbjct: 73 MNAILQCAKFGVPTEGAEMYVTHFPCLHCCKAIIQSGIRAVYYAQD-YKNHPYAL---EL 128
Query: 59 FDAAKV 64
F A V
Sbjct: 129 FAQAGV 134
>gi|408356452|ref|YP_006844983.1| competence protein ComEB [Amphibacillus xylanus NBRC 15112]
gi|407727223|dbj|BAM47221.1| putative competence protein ComEB [Amphibacillus xylanus NBRC
15112]
Length = 151
Score = 76.6 bits (187), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 49/118 (41%), Positives = 65/118 (55%), Gaps = 8/118 (6%)
Query: 89 LEWHEYFMASAFLVAKRSKDPVTRVGAVIVNEDNKIVGTGYNGMPIGCSD---DEFPWDK 145
+ W +YFM + L+A RS VGA IV DN+I+ GYNG G SD DE +
Sbjct: 4 ISWEQYFMTQSHLIALRSTCERLTVGATIV-RDNRIIAGGYNGSVSG-SDHCIDEGCYVI 61
Query: 146 NTHDELDMCHAEMNAILN--KNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIYMCD 201
+ H + HAEMNAIL K T+ ++Y + +PC +C K IIQ+GI V Y D
Sbjct: 62 DGHC-VRTVHAEMNAILQCAKFGVQTEGAEIYVTHYPCLQCCKAIIQAGINTVYYAAD 118
Score = 40.4 bits (93), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 21/54 (38%), Positives = 29/54 (53%), Gaps = 2/54 (3%)
Query: 1 MNAILN--KNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIYMCDKHKQKPAT 52
MNAIL K T+ ++Y + +PC +C K IIQ+GI V Y D A+
Sbjct: 73 MNAILQCAKFGVQTEGAEIYVTHYPCLQCCKAIIQAGINTVYYAADYRNHPYAS 126
>gi|400289467|ref|ZP_10791496.1| cytidine and deoxycytidylate deaminase [Streptococcus ratti FA-1 =
DSM 20564]
gi|399922105|gb|EJN94920.1| cytidine and deoxycytidylate deaminase [Streptococcus ratti FA-1 =
DSM 20564]
Length = 160
Score = 76.6 bits (187), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 46/120 (38%), Positives = 66/120 (55%), Gaps = 10/120 (8%)
Query: 85 VDDVLEWHEYFMASAFLVAKRSKDPVTRVGAVIVNEDNKIVGTGYNGMPIGCSD----DE 140
V L W +YFMA+A L++KRS VGAV+V ++ +I+ TGYNG G SD DE
Sbjct: 3 VTKRLSWQDYFMANAELISKRSTCNRAYVGAVLV-KNKRIIATGYNG---GVSDTDNCDE 58
Query: 141 FPWDKNTHDELDMCHAEMNAILN--KNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIY 198
+ HAEMNA++ K T ++Y + FPC C K ++Q+GI ++ Y
Sbjct: 59 AGHQMEDGHCIRTVHAEMNALIQCAKEGISTNNTEIYVTHFPCINCTKALLQAGISKITY 118
Score = 37.4 bits (85), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 21/69 (30%), Positives = 36/69 (52%), Gaps = 6/69 (8%)
Query: 1 MNAILN--KNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIYMCDKHKQKPATIASKRM 58
MNA++ K T ++Y + FPC C K ++Q+GI ++ Y K +P A + +
Sbjct: 76 MNALIQCAKEGISTNNTEIYVTHFPCINCTKALLQAGISKITY---KTAYRPHPFAIE-L 131
Query: 59 FDAAKVHYW 67
+A V Y+
Sbjct: 132 LEAKNVPYF 140
>gi|418027612|ref|ZP_12666237.1| dCMP deaminase [Streptococcus thermophilus CNCM I-1630]
gi|354691112|gb|EHE91051.1| dCMP deaminase [Streptococcus thermophilus CNCM I-1630]
Length = 140
Score = 76.6 bits (187), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 45/116 (38%), Positives = 68/116 (58%), Gaps = 10/116 (8%)
Query: 89 LEWHEYFMASAFLVAKRSKDPVTRVGAVIVNEDNKIVGTGYNGMPIGCSDDEFPWDKNTH 148
L W +YFMA+A L++KRS VGAV+V +D +I+ TGYNG G S+ + + +
Sbjct: 5 LSWQDYFMANAELISKRSTCDRAFVGAVLV-KDKRIIATGYNG---GVSEADNCNEVGHY 60
Query: 149 DELDMC----HAEMNAILN--KNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIY 198
E C HAEMNA++ K TK ++Y + FPC C K ++Q+G+ ++ Y
Sbjct: 61 MEDGHCIRTVHAEMNALIQCAKEGISTKNTEIYVTHFPCINCTKALLQAGVVKITY 116
Score = 37.4 bits (85), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 19/60 (31%), Positives = 32/60 (53%), Gaps = 5/60 (8%)
Query: 1 MNAILN--KNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIYMCDKHKQKPATIASKRM 58
MNA++ K TK ++Y + FPC C K ++Q+G+ ++ Y K +P A + M
Sbjct: 74 MNALIQCAKEGISTKNTEIYVTHFPCINCTKALLQAGVVKITY---KANYRPHAFAIELM 130
>gi|227824235|ref|ZP_03989067.1| dCMP deaminase [Acidaminococcus sp. D21]
gi|352683952|ref|YP_004895936.1| dCMP deaminase [Acidaminococcus intestini RyC-MR95]
gi|226904734|gb|EEH90652.1| dCMP deaminase [Acidaminococcus sp. D21]
gi|350278606|gb|AEQ21796.1| dCMP deaminase [Acidaminococcus intestini RyC-MR95]
Length = 153
Score = 76.6 bits (187), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 46/121 (38%), Positives = 68/121 (56%), Gaps = 14/121 (11%)
Query: 90 EWHEYFMASAFLVAKRSKDPVTRVGAVIVNEDNKIVGTGYNGMP--------IGCSDDEF 141
+W YFM A +VAKRS +VGAV+V +D +I+ TGYNG P +GC ++
Sbjct: 5 DWDSYFMEIAEVVAKRSTCLRRQVGAVLV-KDRQILATGYNGTPKGIAHCEEVGCLREQL 63
Query: 142 --PWDKNTHDELDMCHAEMNAILNK--NSADTKRCKLYTSLFPCNECAKVIIQSGIKEVI 197
P +N H+ HAE NA++ N TK LY + PC C+K++I +GI+ ++
Sbjct: 64 HVPSGQN-HELCRGIHAEQNAVIQAAVNGVSTKGATLYCTHQPCVVCSKILINAGIERIV 122
Query: 198 Y 198
Y
Sbjct: 123 Y 123
>gi|56421051|ref|YP_148369.1| late competence DNA binding and uptake protein [Geobacillus
kaustophilus HTA426]
gi|375009605|ref|YP_004983238.1| ComE operon protein [Geobacillus thermoleovorans CCB_US3_UF5]
gi|448238795|ref|YP_007402853.1| ComE operon protein 2 [Geobacillus sp. GHH01]
gi|56380893|dbj|BAD76801.1| late competence protein (DNA binding and uptake) [Geobacillus
kaustophilus HTA426]
gi|359288454|gb|AEV20138.1| ComE operon protein [Geobacillus thermoleovorans CCB_US3_UF5]
gi|445207637|gb|AGE23102.1| ComE operon protein 2 [Geobacillus sp. GHH01]
Length = 156
Score = 76.6 bits (187), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 49/117 (41%), Positives = 64/117 (54%), Gaps = 6/117 (5%)
Query: 89 LEWHEYFMASAFLVAKRSKDPVTRVGAVIVNEDNKIVGTGYNGMPIGCS--DDEFPWDKN 146
+ W +YFMA + L+A RS VGA IV D +I+ GYNG G + DE + +
Sbjct: 4 ITWDQYFMAQSHLLALRSTCTRLAVGATIV-RDKRIIAGGYNGSIAGGAHCTDEGCYVID 62
Query: 147 THDELDMCHAEMNAILN--KNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIYMCD 201
H + HAEMNAIL K T+ ++Y + FPC C K IIQSGI+ V Y D
Sbjct: 63 GHC-VRTIHAEMNAILQCAKFGVPTEGAEMYVTHFPCLHCCKAIIQSGIRAVYYAQD 118
Score = 42.4 bits (98), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 24/52 (46%), Positives = 30/52 (57%), Gaps = 3/52 (5%)
Query: 1 MNAILN--KNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIYMCDKHKQKP 50
MNAIL K T+ ++Y + FPC C K IIQSGI+ V Y D +K P
Sbjct: 73 MNAILQCAKFGVPTEGAEMYVTHFPCLHCCKAIIQSGIRAVYYAQD-YKNHP 123
>gi|116628436|ref|YP_821055.1| late competence protein required for DNA binding and uptake
[Streptococcus thermophilus LMD-9]
gi|386087341|ref|YP_006003215.1| Cytidine/deoxycytidylate deaminase family protein [Streptococcus
thermophilus ND03]
gi|386345447|ref|YP_006041611.1| late competence protein required for DNA binding and uptake
[Streptococcus thermophilus JIM 8232]
gi|387910438|ref|YP_006340744.1| late competence protein required for DNA binding and uptake
[Streptococcus thermophilus MN-ZLW-002]
gi|445382597|ref|ZP_21427283.1| late competence protein required for DNA binding and uptake
[Streptococcus thermophilus MTCC 5460]
gi|445395319|ref|ZP_21429016.1| late competence protein required for DNA binding and uptake
[Streptococcus thermophilus MTCC 5461]
gi|116101713|gb|ABJ66859.1| Deoxycytidylate deaminase [Streptococcus thermophilus LMD-9]
gi|312279054|gb|ADQ63711.1| Cytidine/deoxycytidylate deaminase family protein [Streptococcus
thermophilus ND03]
gi|339278908|emb|CCC20656.1| late competence protein required for DNA binding and uptake
[Streptococcus thermophilus JIM 8232]
gi|387575373|gb|AFJ84079.1| late competence protein required for DNA binding and uptake
[Streptococcus thermophilus MN-ZLW-002]
gi|444748554|gb|ELW73517.1| late competence protein required for DNA binding and uptake
[Streptococcus thermophilus MTCC 5461]
gi|444748635|gb|ELW73594.1| late competence protein required for DNA binding and uptake
[Streptococcus thermophilus MTCC 5460]
Length = 151
Score = 76.6 bits (187), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 45/116 (38%), Positives = 68/116 (58%), Gaps = 10/116 (8%)
Query: 89 LEWHEYFMASAFLVAKRSKDPVTRVGAVIVNEDNKIVGTGYNGMPIGCSDDEFPWDKNTH 148
L W +YFMA+A L++KRS VGAV+V +D +I+ TGYNG G S+ + + +
Sbjct: 5 LSWQDYFMANAELISKRSTCDRAFVGAVLV-KDKRIIATGYNG---GVSEADNCNEVGHY 60
Query: 149 DELDMC----HAEMNAILN--KNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIY 198
E C HAEMNA++ K TK ++Y + FPC C K ++Q+G+ ++ Y
Sbjct: 61 MEDGHCIRTVHAEMNALIQCAKEGISTKNTEIYVTHFPCINCTKALLQAGVVKITY 116
Score = 37.7 bits (86), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 19/60 (31%), Positives = 32/60 (53%), Gaps = 5/60 (8%)
Query: 1 MNAILN--KNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIYMCDKHKQKPATIASKRM 58
MNA++ K TK ++Y + FPC C K ++Q+G+ ++ Y K +P A + M
Sbjct: 74 MNALIQCAKEGISTKNTEIYVTHFPCINCTKALLQAGVVKITY---KANYRPHAFAIELM 130
>gi|390944244|ref|YP_006408005.1| deoxycytidylate deaminase [Belliella baltica DSM 15883]
gi|390417672|gb|AFL85250.1| deoxycytidylate deaminase [Belliella baltica DSM 15883]
Length = 160
Score = 76.6 bits (187), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 49/117 (41%), Positives = 62/117 (52%), Gaps = 9/117 (7%)
Query: 91 WHEYFMASAFLVAKRSKDPVTRVGAVIVNEDNKIVGTGYNGMPIGCS--DDEFPWDKNTH 148
+ + FM A +AKRS VGAV+ E +I+ GYNG P G D+EFP D
Sbjct: 6 FDDIFMELAVNLAKRSHCIKKHVGAVLTKE-TRIISIGYNGPPSGTHNCDEEFPIDGCAR 64
Query: 149 DELDMC----HAEMNAILN--KNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIYM 199
D C HAE NAIL KN+ + LY +L PC CA++I GIK VI+M
Sbjct: 65 DSKGSCTLALHAEQNAILYAVKNNTSVEGSTLYVTLAPCLACARIIFSMGIKRVIFM 121
Score = 39.7 bits (91), Expect = 0.67, Method: Compositional matrix adjust.
Identities = 20/43 (46%), Positives = 26/43 (60%), Gaps = 2/43 (4%)
Query: 2 NAILN--KNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIYM 42
NAIL KN+ + LY +L PC CA++I GIK VI+M
Sbjct: 79 NAILYAVKNNTSVEGSTLYVTLAPCLACARIIFSMGIKRVIFM 121
>gi|325955922|ref|YP_004286532.1| dCMP deaminase [Lactobacillus acidophilus 30SC]
gi|385816819|ref|YP_005853209.1| dCMP deaminase [Lactobacillus amylovorus GRL1118]
gi|325332487|gb|ADZ06395.1| dCMP deaminase [Lactobacillus acidophilus 30SC]
gi|327182757|gb|AEA31204.1| dCMP deaminase [Lactobacillus amylovorus GRL1118]
Length = 159
Score = 76.6 bits (187), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 45/122 (36%), Positives = 69/122 (56%), Gaps = 12/122 (9%)
Query: 87 DVLEWHEYFMASAFLVAKRSKDPVTRVGAVIVNEDNKIVGTGYNGMPIGCSDDEFPWDKN 146
D + W +YFM A ++A+RS VG+V+V +D++I+GTGYNG G + D
Sbjct: 3 DRIPWKQYFMMQALVIAQRSTCNRALVGSVLV-KDHRIIGTGYNGSVSG----QPHCDDV 57
Query: 147 THDELD-----MCHAEMNAILN--KNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIYM 199
H +D H+EMNAI+ K T+ ++Y + FPC C K ++Q+GIK++ Y
Sbjct: 58 GHQMVDGHCVRTIHSEMNAIIQCAKFGVSTENTEIYVTHFPCYNCCKALVQAGIKKINYY 117
Query: 200 CD 201
D
Sbjct: 118 FD 119
Score = 38.9 bits (89), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 23/74 (31%), Positives = 41/74 (55%), Gaps = 5/74 (6%)
Query: 1 MNAILN--KNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIYMCDKHKQKPATIASKRM 58
MNAI+ K T+ ++Y + FPC C K ++Q+GIK++ Y D ++ P +A K +
Sbjct: 74 MNAIIQCAKFGVSTENTEIYVTHFPCYNCCKALVQAGIKKINYYFD-YRDNP--LALKLL 130
Query: 59 FDAAKVHYWSEMDK 72
D + ++D+
Sbjct: 131 HDCGVPYEQIKIDR 144
>gi|315037464|ref|YP_004031032.1| dCMP deaminase [Lactobacillus amylovorus GRL 1112]
gi|312275597|gb|ADQ58237.1| dCMP deaminase [Lactobacillus amylovorus GRL 1112]
Length = 159
Score = 76.6 bits (187), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 45/122 (36%), Positives = 69/122 (56%), Gaps = 12/122 (9%)
Query: 87 DVLEWHEYFMASAFLVAKRSKDPVTRVGAVIVNEDNKIVGTGYNGMPIGCSDDEFPWDKN 146
D + W +YFM A ++A+RS VG+V+V +D++I+GTGYNG G + D
Sbjct: 3 DRIPWKQYFMMQALVIAQRSTCNRALVGSVLV-KDHRIIGTGYNGSVSG----QPHCDDV 57
Query: 147 THDELD-----MCHAEMNAILN--KNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIYM 199
H +D H+EMNAI+ K T+ ++Y + FPC C K ++Q+GIK++ Y
Sbjct: 58 GHQMVDDHCVRTIHSEMNAIIQCAKFGVSTENTEIYVTHFPCYNCCKALVQAGIKKINYY 117
Query: 200 CD 201
D
Sbjct: 118 FD 119
Score = 38.9 bits (89), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 23/74 (31%), Positives = 41/74 (55%), Gaps = 5/74 (6%)
Query: 1 MNAILN--KNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIYMCDKHKQKPATIASKRM 58
MNAI+ K T+ ++Y + FPC C K ++Q+GIK++ Y D ++ P +A K +
Sbjct: 74 MNAIIQCAKFGVSTENTEIYVTHFPCYNCCKALVQAGIKKINYYFD-YRDNP--LALKLL 130
Query: 59 FDAAKVHYWSEMDK 72
D + ++D+
Sbjct: 131 HDCGVPYEQIKIDR 144
>gi|385813037|ref|YP_005849430.1| DCMP deaminase [Lactobacillus helveticus H10]
gi|323465756|gb|ADX69443.1| DCMP deaminase [Lactobacillus helveticus H10]
Length = 159
Score = 76.6 bits (187), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 45/122 (36%), Positives = 69/122 (56%), Gaps = 12/122 (9%)
Query: 87 DVLEWHEYFMASAFLVAKRSKDPVTRVGAVIVNEDNKIVGTGYNGMPIGCSDDEFPWDKN 146
D + W +YFM A ++A+RS VG+V+V +DN+I+GTGYNG G + D+
Sbjct: 3 DRIPWKQYFMMQALVIAQRSTCNRALVGSVLV-KDNRIIGTGYNGSVSG----QPHCDEV 57
Query: 147 THDELD-----MCHAEMNAILN--KNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIYM 199
H +D H+EMNAI+ K T ++Y + FPC C K ++Q+G+K++ Y
Sbjct: 58 GHQMVDGHCVRTIHSEMNAIIQCAKFGVSTDDTEIYVTHFPCYNCCKSLLQAGVKKINYY 117
Query: 200 CD 201
D
Sbjct: 118 FD 119
Score = 36.2 bits (82), Expect = 8.6, Method: Compositional matrix adjust.
Identities = 17/46 (36%), Positives = 27/46 (58%), Gaps = 2/46 (4%)
Query: 1 MNAILN--KNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIYMCD 44
MNAI+ K T ++Y + FPC C K ++Q+G+K++ Y D
Sbjct: 74 MNAIIQCAKFGVSTDDTEIYVTHFPCYNCCKSLLQAGVKKINYYFD 119
>gi|78776348|ref|YP_392663.1| zinc-binding CMP/dCMP deaminase [Sulfurimonas denitrificans DSM
1251]
gi|78496888|gb|ABB43428.1| CMP/dCMP deaminase, zinc-binding [Sulfurimonas denitrificans DSM
1251]
Length = 145
Score = 76.6 bits (187), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 47/115 (40%), Positives = 67/115 (58%), Gaps = 9/115 (7%)
Query: 93 EYFMASAFLVAKRSKDPVTRVGAVIVNEDNKIVGTGYNGMPIGCSDDEFPW-DKNTHDEL 151
E F+ A +AK SK +VGAVIV +D +I+ TGYNG P G + W DK TH+
Sbjct: 5 ENFINIAIEIAKASKCVSKQVGAVIV-KDGRILSTGYNGTPAGYINCREHWEDKYTHEHH 63
Query: 152 DMC-----HAEMNAIL--NKNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIYM 199
+ HAEMNAI+ + + +Y +L PC+EC+K II SGI+ ++Y+
Sbjct: 64 EWSKTYEIHAEMNAIIWAARKGISIENATIYVTLEPCSECSKNIIASGIQRIVYL 118
Score = 38.9 bits (89), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 17/44 (38%), Positives = 28/44 (63%), Gaps = 2/44 (4%)
Query: 1 MNAIL--NKNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIYM 42
MNAI+ + + +Y +L PC+EC+K II SGI+ ++Y+
Sbjct: 75 MNAIIWAARKGISIENATIYVTLEPCSECSKNIIASGIQRIVYL 118
>gi|403514245|ref|YP_006655065.1| DCMP deaminase [Lactobacillus helveticus R0052]
gi|403079683|gb|AFR21261.1| DCMP deaminase [Lactobacillus helveticus R0052]
Length = 159
Score = 76.6 bits (187), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 45/122 (36%), Positives = 69/122 (56%), Gaps = 12/122 (9%)
Query: 87 DVLEWHEYFMASAFLVAKRSKDPVTRVGAVIVNEDNKIVGTGYNGMPIGCSDDEFPWDKN 146
D + W +YFM A ++A+RS VG+V+V +DN+I+GTGYNG G + D+
Sbjct: 3 DRIPWKQYFMMQALVIAQRSTCNRALVGSVLV-KDNRIIGTGYNGSVSG----QPHCDEV 57
Query: 147 THDELD-----MCHAEMNAILN--KNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIYM 199
H +D H+EMNAI+ K T ++Y + FPC C K ++Q+G+K++ Y
Sbjct: 58 GHQMVDGHCVRTIHSEMNAIIQCAKFGVSTDDTEIYVTHFPCYNCCKSLLQAGVKKINYY 117
Query: 200 CD 201
D
Sbjct: 118 FD 119
Score = 36.2 bits (82), Expect = 8.8, Method: Compositional matrix adjust.
Identities = 17/46 (36%), Positives = 27/46 (58%), Gaps = 2/46 (4%)
Query: 1 MNAILN--KNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIYMCD 44
MNAI+ K T ++Y + FPC C K ++Q+G+K++ Y D
Sbjct: 74 MNAIIQCAKFGVSTDDTEIYVTHFPCYNCCKSLLQAGVKKINYYFD 119
>gi|397904192|ref|ZP_10505113.1| CMP/dCMP deaminase, zinc-binding [Caloramator australicus RC3]
gi|343178939|emb|CCC58012.1| CMP/dCMP deaminase, zinc-binding [Caloramator australicus RC3]
Length = 148
Score = 76.6 bits (187), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 50/122 (40%), Positives = 64/122 (52%), Gaps = 12/122 (9%)
Query: 91 WHEYFMASAFLVAKRSKDPVTRVGAVIVNEDNKIVGTGYNGMP--------IGCSDDEFP 142
W EYFM A + KRS +VGAVIV +DN+I+ TGYNG+P +GC E
Sbjct: 5 WDEYFMEIAETIKKRSTCLRRQVGAVIV-KDNRILTTGYNGVPPKMRHCDEVGCLRRELN 63
Query: 143 WDKNTHDEL-DMCHAEMNAILN--KNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIYM 199
EL HAE NAI+ K + +Y + PC CAK+II SGIK ++Y
Sbjct: 64 IPSGQRHELCRALHAEQNAIVQAAKYGISIEGSTIYITNQPCIICAKLIIASGIKRIVYS 123
Query: 200 CD 201
D
Sbjct: 124 GD 125
>gi|432328604|ref|YP_007246748.1| deoxycytidylate deaminase [Aciduliprofundum sp. MAR08-339]
gi|432135313|gb|AGB04582.1| deoxycytidylate deaminase [Aciduliprofundum sp. MAR08-339]
Length = 161
Score = 76.6 bits (187), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 48/119 (40%), Positives = 63/119 (52%), Gaps = 12/119 (10%)
Query: 91 WHEYFMASAFLVAKRSKDPVTRVGAVIVNEDNKIVGTGYNGMP--------IGCSDDEFP 142
W EYFM A+L A RS +VGAVIV +D +I+ TGYNG P GC +E
Sbjct: 5 WDEYFMRMAYLAATRSTCTRRKVGAVIV-KDKRILATGYNGPPKGLAHCDVTGCIREELG 63
Query: 143 WDKNTHDEL-DMCHAEMNAILNK--NSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIY 198
EL HAE NAI+ + K K+Y + PC CAK++I + I+E+IY
Sbjct: 64 VPSGERHELCRGLHAEQNAIIQAAVHGVSIKGAKIYVTNHPCVVCAKMLINAEIEEIIY 122
>gi|297529318|ref|YP_003670593.1| ComE operon protein 2 [Geobacillus sp. C56-T3]
gi|297252570|gb|ADI26016.1| ComE operon protein 2 [Geobacillus sp. C56-T3]
Length = 156
Score = 76.6 bits (187), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 49/117 (41%), Positives = 64/117 (54%), Gaps = 6/117 (5%)
Query: 89 LEWHEYFMASAFLVAKRSKDPVTRVGAVIVNEDNKIVGTGYNGMPIGCS--DDEFPWDKN 146
+ W +YFMA + L+A RS VGA IV D +I+ GYNG G + DE + +
Sbjct: 4 ITWDQYFMAQSHLLALRSTCTRLAVGATIV-RDKRIIAGGYNGSIAGGAHCTDEGCYVID 62
Query: 147 THDELDMCHAEMNAILN--KNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIYMCD 201
H + HAEMNAIL K T+ ++Y + FPC C K IIQSGI+ V Y D
Sbjct: 63 GHC-VRTIHAEMNAILQCAKFGVPTEGAEMYVTHFPCLHCCKAIIQSGIRAVYYAQD 118
Score = 42.7 bits (99), Expect = 0.089, Method: Compositional matrix adjust.
Identities = 27/66 (40%), Positives = 35/66 (53%), Gaps = 6/66 (9%)
Query: 1 MNAILN--KNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIYMCDKHKQKPATIASKRM 58
MNAIL K T+ ++Y + FPC C K IIQSGI+ V Y D +K P + +
Sbjct: 73 MNAILQCAKFGVPTEGAEMYVTHFPCLHCCKAIIQSGIRAVYYAQD-YKNHPYAL---EL 128
Query: 59 FDAAKV 64
F A V
Sbjct: 129 FAQAGV 134
>gi|227512166|ref|ZP_03942215.1| competence protein ComEB [Lactobacillus buchneri ATCC 11577]
gi|227084560|gb|EEI19872.1| competence protein ComEB [Lactobacillus buchneri ATCC 11577]
Length = 167
Score = 76.6 bits (187), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 46/123 (37%), Positives = 69/123 (56%), Gaps = 10/123 (8%)
Query: 83 KRVDDVLEWHEYFMASAFLVAKRSKDPVTRVGAVIVNEDNKIVGTGYNGMPIGCSDDEFP 142
+++D+ ++W +YFM A L+A RS VGAVIV D +I+ GYNG G D+
Sbjct: 8 EKMDNRIKWDQYFMMQAVLLASRSTCERLSVGAVIV-RDKRIIAGGYNGSVAG---DDHC 63
Query: 143 WDKNTHDELDMC----HAEMNAILN--KNSADTKRCKLYTSLFPCNECAKVIIQSGIKEV 196
D + C HAEMNAIL K T ++Y + FPC +C K+++Q+GI+ +
Sbjct: 64 IDVGCYLVDGHCVRTIHAEMNAILQCAKFGESTDNAEIYVTDFPCLQCTKMLLQAGIRRI 123
Query: 197 IYM 199
Y+
Sbjct: 124 NYL 126
Score = 40.8 bits (94), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 19/53 (35%), Positives = 32/53 (60%), Gaps = 2/53 (3%)
Query: 1 MNAILN--KNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIYMCDKHKQKPA 51
MNAIL K T ++Y + FPC +C K+++Q+GI+ + Y+ + H + A
Sbjct: 83 MNAILQCAKFGESTDNAEIYVTDFPCLQCTKMLLQAGIRRINYLRNYHNDEYA 135
>gi|295425707|ref|ZP_06818394.1| deoxycytidylate deaminase [Lactobacillus amylolyticus DSM 11664]
gi|295064723|gb|EFG55644.1| deoxycytidylate deaminase [Lactobacillus amylolyticus DSM 11664]
Length = 160
Score = 76.3 bits (186), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 44/120 (36%), Positives = 66/120 (55%), Gaps = 14/120 (11%)
Query: 87 DVLEWHEYFMASAFLVAKRSKDPVTRVGAVIVNEDNKIVGTGYNGMPIGCSDDEFPW-DK 145
D + W +YFM A ++A+RS VG+V+V DN+I+GTGYNG S P D
Sbjct: 3 DRIPWKQYFMMQALVIAQRSTCNRALVGSVLV-RDNRIIGTGYNG-----SISRQPHCDD 56
Query: 146 NTHDELD-----MCHAEMNAILN--KNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIY 198
H +D H+EMN+++ KN T ++Y + FPC C K ++Q+G+K + Y
Sbjct: 57 VGHQMVDGHCVRTIHSEMNSLIQCAKNGVSTDGTEIYVTHFPCYNCTKALVQAGVKRINY 116
Score = 37.7 bits (86), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 15/43 (34%), Positives = 26/43 (60%), Gaps = 2/43 (4%)
Query: 1 MNAILN--KNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIY 41
MN+++ KN T ++Y + FPC C K ++Q+G+K + Y
Sbjct: 74 MNSLIQCAKNGVSTDGTEIYVTHFPCYNCTKALVQAGVKRINY 116
>gi|409997338|ref|YP_006751739.1| hypothetical protein BN194_16730 [Lactobacillus casei W56]
gi|406358350|emb|CCK22620.1| hypothetical protein BN194_16730 [Lactobacillus casei W56]
Length = 168
Score = 76.3 bits (186), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 49/126 (38%), Positives = 67/126 (53%), Gaps = 8/126 (6%)
Query: 81 PHKRVDDVLEWHEYFMASAFLVAKRSKDPVTRVGAVIVNEDNKIVGTGYNGMPIG---CS 137
P KR W +YF+ A V++RS VGAV+V E ++I+ TGYNG G C
Sbjct: 22 PSKRTVHRESWDQYFLELAEKVSERSTCERATVGAVLVQE-HRIIATGYNGAISGDPHC- 79
Query: 138 DDEFPWDKNTHDELDMCHAEMNAILN--KNSADTKRCKLYTSLFPCNECAKVIIQSGIKE 195
D+ ++ H + HAEMNAI+ N T +Y + FPC C K +IQ+GIK
Sbjct: 80 DEAGHLMRDGHC-IRTIHAEMNAIIQCAANGVSTHGATVYVNFFPCLNCTKALIQAGIKR 138
Query: 196 VIYMCD 201
V+Y D
Sbjct: 139 VVYAQD 144
Score = 43.9 bits (102), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 20/46 (43%), Positives = 26/46 (56%), Gaps = 2/46 (4%)
Query: 1 MNAILN--KNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIYMCD 44
MNAI+ N T +Y + FPC C K +IQ+GIK V+Y D
Sbjct: 99 MNAIIQCAANGVSTHGATVYVNFFPCLNCTKALIQAGIKRVVYAQD 144
>gi|312869046|ref|ZP_07729223.1| ComE operon protein 2 [Lactobacillus oris PB013-T2-3]
gi|417885429|ref|ZP_12529583.1| ComE operon protein 2 [Lactobacillus oris F0423]
gi|311095472|gb|EFQ53739.1| ComE operon protein 2 [Lactobacillus oris PB013-T2-3]
gi|341595351|gb|EGS38000.1| ComE operon protein 2 [Lactobacillus oris F0423]
Length = 163
Score = 76.3 bits (186), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 46/117 (39%), Positives = 64/117 (54%), Gaps = 10/117 (8%)
Query: 89 LEWHEYFMASAFLVAKRSKDPVTRVGAVIVNEDNKIVGTGYNGMPIGCSDDEFPWDKNTH 148
++W +YFM A L+A RS VGAV+V D +I+ GYNG S D+ D+ +
Sbjct: 5 IDWDQYFMVQAALLASRSTCKRLSVGAVLV-RDKRIIAGGYNG---SVSGDDHCIDEGCY 60
Query: 149 DELDMC----HAEMNAILN--KNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIYM 199
C HAEMNAIL + T LY + FPC +C K ++Q+GIKE+ Y+
Sbjct: 61 LRDGHCVRTIHAEMNAILQCARFGMSTDGASLYVTDFPCLQCTKSLLQAGIKEINYI 117
Score = 40.8 bits (94), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 20/48 (41%), Positives = 29/48 (60%), Gaps = 2/48 (4%)
Query: 1 MNAILN--KNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIYMCDKH 46
MNAIL + T LY + FPC +C K ++Q+GIKE+ Y+ + H
Sbjct: 74 MNAILQCARFGMSTDGASLYVTDFPCLQCTKSLLQAGIKEINYIRNYH 121
>gi|222055762|ref|YP_002538124.1| dCMP deaminase [Geobacter daltonii FRC-32]
gi|221565051|gb|ACM21023.1| dCMP deaminase [Geobacter daltonii FRC-32]
Length = 156
Score = 76.3 bits (186), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 46/119 (38%), Positives = 63/119 (52%), Gaps = 12/119 (10%)
Query: 91 WHEYFMASAFLVAKRSKDPVTRVGAVIVNEDNKIVGTGYNGMP--------IGCSDDEFP 142
W EYFM LVAKRS +VGA+IV + N I+ TGYNG P +GC ++
Sbjct: 6 WDEYFMGITHLVAKRSTCLRRQVGAIIVKDKN-ILATGYNGAPSGVSHCLDVGCLREKLG 64
Query: 143 WDKNTHDEL-DMCHAEMNAILN--KNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIY 198
EL HAE NAI+ K+ + LY + PC C+K+II +GIK +++
Sbjct: 65 IPSGERHELCRGLHAEQNAIIQAAKHGTGIEGSTLYCTTMPCIICSKMIINAGIKRIVF 123
>gi|350565118|ref|ZP_08933911.1| competence protein comEB [Peptoniphilus indolicus ATCC 29427]
gi|348664112|gb|EGY80632.1| competence protein comEB [Peptoniphilus indolicus ATCC 29427]
Length = 144
Score = 76.3 bits (186), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 45/111 (40%), Positives = 56/111 (50%), Gaps = 3/111 (2%)
Query: 91 WHEYFMASAFLVAKRSKDPVTRVGAVIVNEDNKIVGTGYNGMPIGCSD-DEFPWDKNTHD 149
W EYF+ +VA RS VG VIVN +++IV TGYNG G DE
Sbjct: 5 WDEYFLEITEMVATRSTCDRAFVGCVIVNSEHRIVSTGYNGSLAGNPQCDEIGHTMRDGH 64
Query: 150 ELDMCHAEMNAIL--NKNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIY 198
+ HAEMNA+L K K C Y + FPC C K +IQ+GI + Y
Sbjct: 65 CIATIHAEMNALLYCAKEGISVKGCTAYVTHFPCLNCTKALIQAGITAIYY 115
Score = 37.7 bits (86), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 18/43 (41%), Positives = 23/43 (53%), Gaps = 2/43 (4%)
Query: 1 MNAIL--NKNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIY 41
MNA+L K K C Y + FPC C K +IQ+GI + Y
Sbjct: 73 MNALLYCAKEGISVKGCTAYVTHFPCLNCTKALIQAGITAIYY 115
>gi|336055343|ref|YP_004563630.1| competence protein ComEB family protein [Lactobacillus
kefiranofaciens ZW3]
gi|333958720|gb|AEG41528.1| Competence protein ComEB family protein [Lactobacillus
kefiranofaciens ZW3]
Length = 159
Score = 76.3 bits (186), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 45/122 (36%), Positives = 68/122 (55%), Gaps = 12/122 (9%)
Query: 87 DVLEWHEYFMASAFLVAKRSKDPVTRVGAVIVNEDNKIVGTGYNGMPIGCSDDEFPWDKN 146
D + W +YFM A ++A+RS VG+V+V + N+I+GTGYNG G + D
Sbjct: 3 DRIPWKQYFMMQALVIAQRSTCNRALVGSVLV-KGNRIIGTGYNGSVSG----QPHCDDV 57
Query: 147 THDELD-----MCHAEMNAILN--KNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIYM 199
H +D H+EMNAI+ K T+ ++Y + FPC C K ++Q+G+KE+ Y
Sbjct: 58 GHQMVDGHCVRTIHSEMNAIIQCAKFGVSTENTEIYVTHFPCYNCCKSLLQAGVKEINYY 117
Query: 200 CD 201
D
Sbjct: 118 FD 119
Score = 39.3 bits (90), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 18/46 (39%), Positives = 28/46 (60%), Gaps = 2/46 (4%)
Query: 1 MNAILN--KNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIYMCD 44
MNAI+ K T+ ++Y + FPC C K ++Q+G+KE+ Y D
Sbjct: 74 MNAIIQCAKFGVSTENTEIYVTHFPCYNCCKSLLQAGVKEINYYFD 119
>gi|448933509|gb|AGE57065.1| dCMP deaminase [Acanthocystis turfacea Chlorella virus NE-JV-3]
Length = 149
Score = 76.3 bits (186), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 38/107 (35%), Positives = 65/107 (60%), Gaps = 3/107 (2%)
Query: 93 EYFMASAFLVAKRSKDPVTRVGAVIVNEDNKIVGTGYNGMPIGCSDDEFPWDKNTHDELD 152
+++ S + SKDP T+V A++++ ++ I+ GYNG+P G + + W K +
Sbjct: 6 KFYSLSCYHAQLFSKDPNTKVAAMVIDANHNILSVGYNGLPRGFEETQERWSKPEKYQY- 64
Query: 153 MCHAEMNAILN--KNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVI 197
+ HAE NAI +N A + ++LFPC++CA++IIQ+GIK+V
Sbjct: 65 VVHAEANAICTAARNGAKLDGGSIVSTLFPCDQCARLIIQAGIKKVF 111
Score = 39.3 bits (90), Expect = 0.86, Method: Compositional matrix adjust.
Identities = 15/34 (44%), Positives = 25/34 (73%)
Query: 7 KNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVI 40
+N A + ++LFPC++CA++IIQ+GIK+V
Sbjct: 78 RNGAKLDGGSIVSTLFPCDQCARLIIQAGIKKVF 111
>gi|261418466|ref|YP_003252148.1| ComE operon protein 2 [Geobacillus sp. Y412MC61]
gi|319767573|ref|YP_004133074.1| ComE operon protein 2 [Geobacillus sp. Y412MC52]
gi|261374923|gb|ACX77666.1| ComE operon protein 2 [Geobacillus sp. Y412MC61]
gi|317112439|gb|ADU94931.1| ComE operon protein 2 [Geobacillus sp. Y412MC52]
Length = 156
Score = 76.3 bits (186), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 49/117 (41%), Positives = 64/117 (54%), Gaps = 6/117 (5%)
Query: 89 LEWHEYFMASAFLVAKRSKDPVTRVGAVIVNEDNKIVGTGYNGMPIGCS--DDEFPWDKN 146
+ W +YFMA + L+A RS VGA IV D +I+ GYNG G + DE + +
Sbjct: 4 ITWDQYFMAQSHLLALRSTCTRLAVGATIV-RDKRIIAGGYNGSIAGGAHCTDEGCYVID 62
Query: 147 THDELDMCHAEMNAILN--KNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIYMCD 201
H + HAEMNAIL K T+ ++Y + FPC C K IIQSGI+ V Y D
Sbjct: 63 GHC-VRTIHAEMNAILQCAKFGVPTEGAEMYVTHFPCLHCCKAIIQSGIRAVYYAQD 118
Score = 42.7 bits (99), Expect = 0.091, Method: Compositional matrix adjust.
Identities = 27/66 (40%), Positives = 35/66 (53%), Gaps = 6/66 (9%)
Query: 1 MNAILN--KNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIYMCDKHKQKPATIASKRM 58
MNAIL K T+ ++Y + FPC C K IIQSGI+ V Y D +K P + +
Sbjct: 73 MNAILQCAKFGVPTEGAEMYVTHFPCLHCCKAIIQSGIRAVYYAQD-YKNHPYAL---EL 128
Query: 59 FDAAKV 64
F A V
Sbjct: 129 FAQAGV 134
>gi|55821713|ref|YP_140155.1| late competence protein required for DNA binding and uptake
[Streptococcus thermophilus LMG 18311]
gi|55823633|ref|YP_142074.1| late competence protein required for DNA binding and uptake
[Streptococcus thermophilus CNRZ1066]
gi|55737698|gb|AAV61340.1| late competence protein required for DNA binding and uptake
[Streptococcus thermophilus LMG 18311]
gi|55739618|gb|AAV63259.1| late competence protein required for DNA binding and uptake
[Streptococcus thermophilus CNRZ1066]
Length = 156
Score = 76.3 bits (186), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 45/116 (38%), Positives = 68/116 (58%), Gaps = 10/116 (8%)
Query: 89 LEWHEYFMASAFLVAKRSKDPVTRVGAVIVNEDNKIVGTGYNGMPIGCSDDEFPWDKNTH 148
L W +YFMA+A L++KRS VGAV+V +D +I+ TGYNG G S+ + + +
Sbjct: 10 LSWQDYFMANAELISKRSTCDRAFVGAVLV-KDKRIIATGYNG---GVSEADNCNEVGHY 65
Query: 149 DELDMC----HAEMNAILN--KNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIY 198
E C HAEMNA++ K TK ++Y + FPC C K ++Q+G+ ++ Y
Sbjct: 66 MEDGHCIRTVHAEMNALIQCAKEGISTKNTEIYVTHFPCINCTKALLQAGVVKITY 121
Score = 37.7 bits (86), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 19/60 (31%), Positives = 32/60 (53%), Gaps = 5/60 (8%)
Query: 1 MNAILN--KNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIYMCDKHKQKPATIASKRM 58
MNA++ K TK ++Y + FPC C K ++Q+G+ ++ Y K +P A + M
Sbjct: 79 MNALIQCAKEGISTKNTEIYVTHFPCINCTKALLQAGVVKITY---KANYRPHAFAIELM 135
>gi|191638477|ref|YP_001987643.1| ComE operon protein 2 [Lactobacillus casei BL23]
gi|227535031|ref|ZP_03965080.1| competence protein ComEB [Lactobacillus paracasei subsp. paracasei
ATCC 25302]
gi|239631434|ref|ZP_04674465.1| ComE operon protein 2 [Lactobacillus paracasei subsp. paracasei
8700:2]
gi|301066532|ref|YP_003788555.1| competence protein ComE [Lactobacillus casei str. Zhang]
gi|385820184|ref|YP_005856571.1| TetR family transcriptional regulator [Lactobacillus casei LC2W]
gi|385823381|ref|YP_005859723.1| TetR family transcriptional regulator [Lactobacillus casei BD-II]
gi|417980772|ref|ZP_12621451.1| dCMP deaminase [Lactobacillus casei 12A]
gi|417983504|ref|ZP_12624140.1| dCMP deaminase [Lactobacillus casei 21/1]
gi|417986846|ref|ZP_12627411.1| dCMP deaminase [Lactobacillus casei 32G]
gi|417992991|ref|ZP_12633342.1| dCMP deaminase [Lactobacillus casei CRF28]
gi|417996345|ref|ZP_12636626.1| dCMP deaminase [Lactobacillus casei M36]
gi|418002165|ref|ZP_12642289.1| dCMP deaminase [Lactobacillus casei UCD174]
gi|418005194|ref|ZP_12645190.1| dCMP deaminase [Lactobacillus casei UW1]
gi|418008073|ref|ZP_12647943.1| dCMP deaminase [Lactobacillus casei UW4]
gi|418010927|ref|ZP_12650698.1| dCMP deaminase [Lactobacillus casei Lc-10]
gi|418015167|ref|ZP_12654744.1| dCMP deaminase [Lactobacillus casei Lpc-37]
gi|190712779|emb|CAQ66785.1| ComE operon protein 2 [Lactobacillus casei BL23]
gi|227187346|gb|EEI67413.1| competence protein ComEB [Lactobacillus paracasei subsp. paracasei
ATCC 25302]
gi|239525899|gb|EEQ64900.1| ComE operon protein 2 [Lactobacillus paracasei subsp. paracasei
8700:2]
gi|300438939|gb|ADK18705.1| ComE operon protein 2 [Lactobacillus casei str. Zhang]
gi|327382511|gb|AEA53987.1| Transcriptional regulator, TetR family protein [Lactobacillus casei
LC2W]
gi|327385708|gb|AEA57182.1| Transcriptional regulator, TetR family protein [Lactobacillus casei
BD-II]
gi|410524283|gb|EKP99195.1| dCMP deaminase [Lactobacillus casei 12A]
gi|410524580|gb|EKP99488.1| dCMP deaminase [Lactobacillus casei 32G]
gi|410527773|gb|EKQ02635.1| dCMP deaminase [Lactobacillus casei 21/1]
gi|410532400|gb|EKQ07108.1| dCMP deaminase [Lactobacillus casei CRF28]
gi|410535656|gb|EKQ10273.1| dCMP deaminase [Lactobacillus casei M36]
gi|410544848|gb|EKQ19162.1| dCMP deaminase [Lactobacillus casei UCD174]
gi|410547447|gb|EKQ21680.1| dCMP deaminase [Lactobacillus casei UW1]
gi|410547553|gb|EKQ21784.1| dCMP deaminase [Lactobacillus casei UW4]
gi|410551991|gb|EKQ26030.1| dCMP deaminase [Lactobacillus casei Lpc-37]
gi|410553506|gb|EKQ27509.1| dCMP deaminase [Lactobacillus casei Lc-10]
Length = 153
Score = 76.3 bits (186), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 49/126 (38%), Positives = 67/126 (53%), Gaps = 8/126 (6%)
Query: 81 PHKRVDDVLEWHEYFMASAFLVAKRSKDPVTRVGAVIVNEDNKIVGTGYNGMPIG---CS 137
P KR W +YF+ A V++RS VGAV+V E ++I+ TGYNG G C
Sbjct: 7 PSKRTVHRESWDQYFLELAEKVSERSTCERATVGAVLVQE-HRIIATGYNGAISGDPHC- 64
Query: 138 DDEFPWDKNTHDELDMCHAEMNAILN--KNSADTKRCKLYTSLFPCNECAKVIIQSGIKE 195
D+ ++ H + HAEMNAI+ N T +Y + FPC C K +IQ+GIK
Sbjct: 65 DEAGHLMRDGHC-IRTIHAEMNAIIQCAANGVSTHGATVYVNFFPCLNCTKALIQAGIKR 123
Query: 196 VIYMCD 201
V+Y D
Sbjct: 124 VVYAQD 129
Score = 43.5 bits (101), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 20/46 (43%), Positives = 26/46 (56%), Gaps = 2/46 (4%)
Query: 1 MNAILN--KNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIYMCD 44
MNAI+ N T +Y + FPC C K +IQ+GIK V+Y D
Sbjct: 84 MNAIIQCAANGVSTHGATVYVNFFPCLNCTKALIQAGIKRVVYAQD 129
>gi|387929804|ref|ZP_10132481.1| hypothetical protein PB1_15349 [Bacillus methanolicus PB1]
gi|387586622|gb|EIJ78946.1| hypothetical protein PB1_15349 [Bacillus methanolicus PB1]
Length = 155
Score = 76.3 bits (186), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 49/117 (41%), Positives = 64/117 (54%), Gaps = 6/117 (5%)
Query: 89 LEWHEYFMASAFLVAKRSKDPVTRVGAVIVNEDNKIVGTGYNGMPIGCSD--DEFPWDKN 146
+ W++YFMA + L+A RS VGA IV D +I+ GYNG G DE + +
Sbjct: 4 ISWNQYFMAQSHLLALRSTCTRLAVGATIV-RDKRIIAGGYNGSIAGGEHCIDEGCYVID 62
Query: 147 THDELDMCHAEMNAILN--KNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIYMCD 201
H + HAEMNA+L K T ++Y + FPC +C K IIQSGIK V Y D
Sbjct: 63 NHC-VRTIHAEMNALLQCAKFGVPTAGAEIYVTHFPCLQCCKAIIQSGIKTVYYAKD 118
Score = 45.8 bits (107), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 29/66 (43%), Positives = 37/66 (56%), Gaps = 6/66 (9%)
Query: 1 MNAILN--KNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIYMCDKHKQKPATIASKRM 58
MNA+L K T ++Y + FPC +C K IIQSGIK V Y D +K P I +
Sbjct: 73 MNALLQCAKFGVPTAGAEIYVTHFPCLQCCKAIIQSGIKTVYYAKD-YKNHPYAI---EL 128
Query: 59 FDAAKV 64
F+ AKV
Sbjct: 129 FEKAKV 134
>gi|145485052|ref|XP_001428535.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124395621|emb|CAK61137.1| unnamed protein product [Paramecium tetraurelia]
Length = 353
Score = 76.3 bits (186), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 49/136 (36%), Positives = 74/136 (54%), Gaps = 21/136 (15%)
Query: 80 SPHKRVDDVLE-----WHEYFMASAFLVAKRSKDPVTRVGAVIVNEDNKIVGTGYNGMPI 134
S +K+ D+ W++YFM A +V +RS VG VIV +D++IV TGYNG P
Sbjct: 193 SFYKKYQDIFRPIRPNWNQYFMHLANVVKQRSNCMKRAVGVVIV-KDSRIVATGYNGTPY 251
Query: 135 GCSDDEFPWDK-------NTHDELDM-----CHAEMNAILNKNSADTKRCKLYTSLFPCN 182
G + W+K NT +D+ HAE +AIL + +K +YT+LFPC
Sbjct: 252 GKQN---CWEKGCDRCNQNTKQGVDLEKCFCFHAEESAILEIGTKKSKNMVMYTTLFPCL 308
Query: 183 ECAKVIIQSGIKEVIY 198
+C K+I+ + I ++ Y
Sbjct: 309 QCTKIILSTKIDKIYY 324
Score = 37.4 bits (85), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 15/40 (37%), Positives = 26/40 (65%)
Query: 2 NAILNKNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIY 41
+AIL + +K +YT+LFPC +C K+I+ + I ++ Y
Sbjct: 285 SAILEIGTKKSKNMVMYTTLFPCLQCTKIILSTKIDKIYY 324
>gi|386586700|ref|YP_006083102.1| deoxycytidylate deaminase [Streptococcus suis D12]
gi|389857128|ref|YP_006359371.1| deoxycytidylate deaminase [Streptococcus suis ST1]
gi|353738846|gb|AER19854.1| deoxycytidylate deaminase [Streptococcus suis D12]
gi|353740846|gb|AER21853.1| deoxycytidylate deaminase [Streptococcus suis ST1]
Length = 155
Score = 76.3 bits (186), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 49/121 (40%), Positives = 66/121 (54%), Gaps = 9/121 (7%)
Query: 89 LEWHEYFMASAFLVAKRSKDPVTRVGAVIVNEDNKIVGTGYNGMPIG---CSDDE-FPWD 144
L W EYF A A L+A R+ +VGAV+V +DNK++ TGYNG G C D E D
Sbjct: 6 LAWDEYFAAQALLIANRATCKRAKVGAVLV-KDNKVIATGYNGSVSGTEHCLDQECLMID 64
Query: 145 KNTHDELDMCHAEMNAIL-NKNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIYMCDKQ 203
+ L HAE+NAIL K Y + FPC C+K ++Q G K V+Y+ + +
Sbjct: 65 GHCARTL---HAEVNAILQGAERGIPKGFTAYVTHFPCLNCSKQLLQVGCKRVVYINEYR 121
Query: 204 M 204
M
Sbjct: 122 M 122
>gi|116872912|ref|YP_849693.1| zinc-binding, ComEB family competence protein [Listeria welshimeri
serovar 6b str. SLCC5334]
gi|116741790|emb|CAK20914.1| zinc-binding, ComEB family competence protein [Listeria welshimeri
serovar 6b str. SLCC5334]
Length = 186
Score = 76.3 bits (186), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 48/119 (40%), Positives = 66/119 (55%), Gaps = 10/119 (8%)
Query: 89 LEWHEYFMASAFLVAKRSKDPVTRVGAVIVNEDNKIVGTGYNGMPIG---CSDDE-FPWD 144
+ W ++FMA + L++ RS VGA IV D +I+ GYNG G C++ + D
Sbjct: 4 IAWDQFFMAQSHLISSRSTCTRLMVGATIV-RDKRIIAGGYNGSIAGGDHCAEHGCYVVD 62
Query: 145 KNTHDELDMCHAEMNAILN--KNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIYMCD 201
+ + HAEMNAIL K A T R +LY + FPC C K IIQ+GIK+V + D
Sbjct: 63 GHC---IRTIHAEMNAILQCAKFGASTDRAELYVTHFPCLACTKSIIQAGIKKVYFAKD 118
Score = 47.4 bits (111), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 29/66 (43%), Positives = 37/66 (56%), Gaps = 6/66 (9%)
Query: 1 MNAILN--KNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIYMCDKHKQKPATIASKRM 58
MNAIL K A T R +LY + FPC C K IIQ+GIK+V Y +K P + +
Sbjct: 73 MNAILQCAKFGASTDRAELYVTHFPCLACTKSIIQAGIKKV-YFAKDYKNHPYAL---EL 128
Query: 59 FDAAKV 64
F+ A V
Sbjct: 129 FNIAGV 134
>gi|110598481|ref|ZP_01386752.1| CMP/dCMP deaminase, zinc-binding [Chlorobium ferrooxidans DSM
13031]
gi|110339931|gb|EAT58435.1| CMP/dCMP deaminase, zinc-binding [Chlorobium ferrooxidans DSM
13031]
Length = 177
Score = 76.3 bits (186), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 45/122 (36%), Positives = 66/122 (54%), Gaps = 13/122 (10%)
Query: 89 LEWHEYFMASAFLVAKRSKDPVTRVGAVIVNEDNKIVGTGYNGMPIG---CSDDEFPWDK 145
L WHEYFM+ A L+++R+ +GAVIV D+ I+ TGYNG P G C++ +
Sbjct: 26 LGWHEYFMSVAHLISRRATCTRGHIGAVIV-RDHNILSTGYNGAPSGLPHCNETTCRIYR 84
Query: 146 NTHDE-------LDMCHAEMNAI--LNKNSADTKRCKLYTSLFPCNECAKVIIQSGIKEV 196
+TH + ++ HAE+NAI K+ +Y + PC C KV+I GIK +
Sbjct: 85 STHPDGTVEENCVNTIHAEINAIAMAAKHGVSIGEADIYITSSPCIHCLKVLINVGIKTI 144
Query: 197 IY 198
Y
Sbjct: 145 YY 146
>gi|197119397|ref|YP_002139824.1| deoxycytidylate deaminase [Geobacter bemidjiensis Bem]
gi|253699854|ref|YP_003021043.1| dCMP deaminase [Geobacter sp. M21]
gi|197088757|gb|ACH40028.1| deoxycytidylate deaminase [Geobacter bemidjiensis Bem]
gi|251774704|gb|ACT17285.1| dCMP deaminase [Geobacter sp. M21]
Length = 151
Score = 76.3 bits (186), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 48/120 (40%), Positives = 64/120 (53%), Gaps = 12/120 (10%)
Query: 91 WHEYFMASAFLVAKRSKDPVTRVGAVIVNEDNKIVGTGYNGMP--------IGCSDDEFP 142
W EYF+ LVAKRS +VGAV+V + N I+ TGYNG P IGC ++
Sbjct: 6 WDEYFIEITRLVAKRSTCLRRQVGAVLVKDKN-ILATGYNGAPSGTAHCLDIGCLREKMG 64
Query: 143 WDKNTHDEL-DMCHAEMNAILN--KNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIYM 199
EL HAE NAI+ K+ + LY + PC C+K++I SGIK V+Y+
Sbjct: 65 IPSGERHELCRGLHAEQNAIIQAAKHGTSIEGATLYCNTMPCIICSKMVINSGIKRVVYL 124
>gi|299822872|ref|ZP_07054758.1| deoxycytidylate deaminase [Listeria grayi DSM 20601]
gi|299816401|gb|EFI83639.1| deoxycytidylate deaminase [Listeria grayi DSM 20601]
Length = 160
Score = 76.3 bits (186), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 47/116 (40%), Positives = 65/116 (56%), Gaps = 10/116 (8%)
Query: 89 LEWHEYFMASAFLVAKRSKDPVTRVGAVIVNEDNKIVGTGYNGMPIG---CSDDE-FPWD 144
+ W ++FMA ++L++ RS VGA IV D +I+ +GYNG G C++ + D
Sbjct: 4 IAWDQFFMAQSYLISTRSTCTRLMVGATIV-RDKRIIASGYNGSIAGGDHCTEHGCYIVD 62
Query: 145 KNTHDELDMCHAEMNAILN--KNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIY 198
+ + HAEMNAIL K A T +LY + FPC C K IIQ+GIK V Y
Sbjct: 63 GHC---IRTIHAEMNAILQCAKFGASTDNAELYVTHFPCISCCKSIIQAGIKTVYY 115
Score = 44.7 bits (104), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 29/66 (43%), Positives = 36/66 (54%), Gaps = 6/66 (9%)
Query: 1 MNAILN--KNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIYMCDKHKQKPATIASKRM 58
MNAIL K A T +LY + FPC C K IIQ+GIK V Y D +K P + +
Sbjct: 73 MNAILQCAKFGASTDNAELYVTHFPCISCCKSIIQAGIKTVYYGED-YKNHPYAV---EL 128
Query: 59 FDAAKV 64
F+ A V
Sbjct: 129 FEQANV 134
>gi|433656134|ref|YP_007299842.1| deoxycytidylate deaminase [Thermoanaerobacterium
thermosaccharolyticum M0795]
gi|433294323|gb|AGB20145.1| deoxycytidylate deaminase [Thermoanaerobacterium
thermosaccharolyticum M0795]
Length = 148
Score = 76.3 bits (186), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 49/122 (40%), Positives = 62/122 (50%), Gaps = 12/122 (9%)
Query: 91 WHEYFMASAFLVAKRSKDPVTRVGAVIVNEDNKIVGTGYNGMP--------IGCSDDEFP 142
W EYFM ++ RS +VGAVIV +D I+ TGYNG P +GC +
Sbjct: 6 WDEYFMMVVDVLKTRSTCLRRQVGAVIV-KDKHIISTGYNGAPTGLKHCEEVGCMRENLN 64
Query: 143 WDKNTHDEL-DMCHAEMNAILNK--NSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIYM 199
EL HAE NAI+ N TK +Y S PC+ CAK+II +GIK V+Y
Sbjct: 65 IPSGERHELCRGIHAEQNAIIQAALNGVSTKDATIYVSASPCSMCAKMIINAGIKRVVYE 124
Query: 200 CD 201
D
Sbjct: 125 GD 126
Score = 41.2 bits (95), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 21/45 (46%), Positives = 27/45 (60%), Gaps = 2/45 (4%)
Query: 2 NAILNK--NSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIYMCD 44
NAI+ N TK +Y S PC+ CAK+II +GIK V+Y D
Sbjct: 82 NAIIQAALNGVSTKDATIYVSASPCSMCAKMIINAGIKRVVYEGD 126
>gi|330833249|ref|YP_004402074.1| deoxycytidylate deaminase [Streptococcus suis ST3]
gi|386584651|ref|YP_006081054.1| deoxycytidylate deaminase [Streptococcus suis D9]
gi|329307472|gb|AEB81888.1| deoxycytidylate deaminase [Streptococcus suis ST3]
gi|353736797|gb|AER17806.1| deoxycytidylate deaminase [Streptococcus suis D9]
Length = 155
Score = 76.3 bits (186), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 49/121 (40%), Positives = 66/121 (54%), Gaps = 9/121 (7%)
Query: 89 LEWHEYFMASAFLVAKRSKDPVTRVGAVIVNEDNKIVGTGYNGMPIG---CSDDE-FPWD 144
L W EYF A A L+A R+ +VGAV+V +DNK++ TGYNG G C D E D
Sbjct: 6 LAWDEYFAAQALLIANRATCKRAKVGAVLV-KDNKVIATGYNGSVSGTEHCLDQECLMID 64
Query: 145 KNTHDELDMCHAEMNAIL-NKNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIYMCDKQ 203
+ L HAE+NAIL K Y + FPC C+K ++Q G K V+Y+ + +
Sbjct: 65 GHCARTL---HAEVNAILQGAERGIPKGFTAYVTHFPCLNCSKQLLQVGCKRVVYINEYR 121
Query: 204 M 204
M
Sbjct: 122 M 122
>gi|223933157|ref|ZP_03625149.1| CMP/dCMP deaminase zinc-binding [Streptococcus suis 89/1591]
gi|223898218|gb|EEF64587.1| CMP/dCMP deaminase zinc-binding [Streptococcus suis 89/1591]
Length = 155
Score = 76.3 bits (186), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 49/121 (40%), Positives = 66/121 (54%), Gaps = 9/121 (7%)
Query: 89 LEWHEYFMASAFLVAKRSKDPVTRVGAVIVNEDNKIVGTGYNGMPIG---CSDDE-FPWD 144
L W EYF A A L+A R+ +VGAV+V +DNK++ TGYNG G C D E D
Sbjct: 6 LAWDEYFAAQALLIANRATCKRAKVGAVLV-KDNKVIATGYNGSVSGTEHCLDQECLMVD 64
Query: 145 KNTHDELDMCHAEMNAIL-NKNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIYMCDKQ 203
+ L HAE+NAIL K Y + FPC C+K ++Q G K V+Y+ + +
Sbjct: 65 GHCARTL---HAEVNAILQGAERGIPKGFTAYVTHFPCLNCSKQLLQVGCKRVVYINEYR 121
Query: 204 M 204
M
Sbjct: 122 M 122
>gi|227529052|ref|ZP_03959101.1| competence protein ComEB [Lactobacillus vaginalis ATCC 49540]
gi|227351064|gb|EEJ41355.1| competence protein ComEB [Lactobacillus vaginalis ATCC 49540]
Length = 161
Score = 76.3 bits (186), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 51/122 (41%), Positives = 68/122 (55%), Gaps = 12/122 (9%)
Query: 83 KRVDDVLEWHEYFMASAFLVAKRSKDPVTRVGAVIVNEDNKIVGTGYNGMPIG---CSDD 139
KR+D W +YFM A L+A RS VGAV+V D +I+ GYNG G C DD
Sbjct: 3 KRID----WDQYFMIQAALLASRSTCNRLSVGAVLV-RDKRIIAGGYNGSVSGDAHCIDD 57
Query: 140 EFPWDKNTHDELDMCHAEMNAILN--KNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVI 197
+ ++ H + HAEMNAIL K T LY + FPC +C K ++Q+GIKE+
Sbjct: 58 G-CYLRDGH-CVRTIHAEMNAILQCAKFGISTDGASLYVTDFPCLQCTKSLLQAGIKEIN 115
Query: 198 YM 199
Y+
Sbjct: 116 YI 117
Score = 41.6 bits (96), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 22/53 (41%), Positives = 31/53 (58%), Gaps = 2/53 (3%)
Query: 1 MNAILN--KNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIYMCDKHKQKPA 51
MNAIL K T LY + FPC +C K ++Q+GIKE+ Y+ + H + A
Sbjct: 74 MNAILQCAKFGISTDGASLYVTDFPCLQCTKSLLQAGIKEINYIRNYHNDEYA 126
>gi|253752314|ref|YP_003025455.1| cytidine and deoxycytidylate deaminase [Streptococcus suis SC84]
gi|253754140|ref|YP_003027281.1| cytidine and deoxycytidylate deaminase [Streptococcus suis P1/7]
gi|253756074|ref|YP_003029214.1| cytidine and deoxycytidylate deaminase [Streptococcus suis BM407]
gi|386580518|ref|YP_006076923.1| putative cytidine and deoxycytidylate deaminase [Streptococcus suis
JS14]
gi|386582592|ref|YP_006078996.1| putative cytidine and deoxycytidylate deaminase [Streptococcus suis
SS12]
gi|386588715|ref|YP_006085116.1| putative cytidine and deoxycytidylate deaminase [Streptococcus suis
A7]
gi|403062064|ref|YP_006650280.1| cytidine and deoxycytidylate deaminase [Streptococcus suis S735]
gi|251816603|emb|CAZ52241.1| putative cytidine and deoxycytidylate deaminase [Streptococcus suis
SC84]
gi|251818538|emb|CAZ56369.1| putative cytidine and deoxycytidylate deaminase [Streptococcus suis
BM407]
gi|251820386|emb|CAR46982.1| putative cytidine and deoxycytidylate deaminase [Streptococcus suis
P1/7]
gi|319758710|gb|ADV70652.1| putative cytidine and deoxycytidylate deaminase [Streptococcus suis
JS14]
gi|353734738|gb|AER15748.1| putative cytidine and deoxycytidylate deaminase [Streptococcus suis
SS12]
gi|354985876|gb|AER44774.1| putative cytidine and deoxycytidylate deaminase [Streptococcus suis
A7]
gi|402809390|gb|AFR00882.1| putative cytidine and deoxycytidylate deaminase [Streptococcus suis
S735]
Length = 155
Score = 76.3 bits (186), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 49/121 (40%), Positives = 66/121 (54%), Gaps = 9/121 (7%)
Query: 89 LEWHEYFMASAFLVAKRSKDPVTRVGAVIVNEDNKIVGTGYNGMPIG---CSDDE-FPWD 144
L W EYF A A L+A R+ +VGAV+V +DNK++ TGYNG G C D E D
Sbjct: 6 LAWDEYFAAQALLIANRATCKRAKVGAVLV-KDNKVIATGYNGSVSGTEHCLDQECLMID 64
Query: 145 KNTHDELDMCHAEMNAIL-NKNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIYMCDKQ 203
+ L HAE+NAIL K Y + FPC C+K ++Q G K V+Y+ + +
Sbjct: 65 GHCARTL---HAEVNAILQGAERGIPKGFTAYVTHFPCLNCSKQLLQVGCKRVVYINEYR 121
Query: 204 M 204
M
Sbjct: 122 M 122
>gi|452975126|gb|EME74945.1| cytidine deaminase ComEB [Bacillus sonorensis L12]
Length = 189
Score = 76.3 bits (186), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 48/119 (40%), Positives = 66/119 (55%), Gaps = 10/119 (8%)
Query: 89 LEWHEYFMASAFLVAKRSKDPVTRVGAVIVNEDNKIVGTGYNGMPIG---CSDDE-FPWD 144
+ W +YFMA + L+A RS VGA IV D +I+ GYNG G C+D+ + D
Sbjct: 4 ISWDQYFMAQSHLLALRSTCTRLAVGATIVR-DKRIIAGGYNGSIAGGVHCTDEGCYVID 62
Query: 145 KNTHDELDMCHAEMNAILN--KNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIYMCD 201
+ + HAEMNAIL K T+ ++Y + FPC +C K IIQ+GIK + Y D
Sbjct: 63 GHC---VRTIHAEMNAILQCAKFGVPTEGAEIYVTHFPCIQCCKSIIQAGIKTIYYAKD 118
Score = 43.9 bits (102), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 29/76 (38%), Positives = 42/76 (55%), Gaps = 7/76 (9%)
Query: 1 MNAILN--KNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIYMCDKHKQKPATIASKRM 58
MNAIL K T+ ++Y + FPC +C K IIQ+GIK + Y D +K P + +
Sbjct: 73 MNAILQCAKFGVPTEGAEIYVTHFPCIQCCKSIIQAGIKTIYYAKD-YKNHP---YAAEL 128
Query: 59 FDAAKVHYWS-EMDKM 73
F+ A V E+D+M
Sbjct: 129 FEQASVRVEQVELDEM 144
>gi|91791447|ref|YP_561098.1| CMP/dCMP deaminase, zinc-binding [Shewanella denitrificans OS217]
gi|91713449|gb|ABE53375.1| CMP/dCMP deaminase, zinc-binding [Shewanella denitrificans OS217]
Length = 147
Score = 76.3 bits (186), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 49/116 (42%), Positives = 62/116 (53%), Gaps = 5/116 (4%)
Query: 88 VLEWHEYFMASAFLVAKRSKDPVTRVGAVIVNEDNKIVGTGYNGMPIGCSDDEFPWDKNT 147
+ +W + F A LV SKDP T+VGAVI N+IV G+NG P G SD D++
Sbjct: 2 ISKWAKRFFQMAELVGSWSKDPSTQVGAVITKH-NRIVSVGFNGYPHGISDSAETDDRDM 60
Query: 148 HDELDMCHAEMNAILNKNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIYMCDKQ 203
L HAE NAIL D C ++ + FPC CA IIQ+GI V C +Q
Sbjct: 61 K-LLKTLHAEENAILFAKR-DLDGCDIWVTHFPCPNCAAKIIQTGITGV--FCPEQ 112
>gi|365851398|ref|ZP_09391833.1| ComE operon protein 2 [Lactobacillus parafarraginis F0439]
gi|363716975|gb|EHM00365.1| ComE operon protein 2 [Lactobacillus parafarraginis F0439]
Length = 158
Score = 76.3 bits (186), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 46/121 (38%), Positives = 68/121 (56%), Gaps = 10/121 (8%)
Query: 85 VDDVLEWHEYFMASAFLVAKRSKDPVTRVGAVIVNEDNKIVGTGYNGMPIGCSDDEFPWD 144
+D+ ++W +YFM A L+A RS VGAVIV D +I+ GYNG G D+ D
Sbjct: 1 MDNRIKWDQYFMMQAVLLASRSTCERLSVGAVIV-RDKRIIAGGYNGSVAG---DDHCID 56
Query: 145 KNTHDELDMC----HAEMNAILN--KNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIY 198
+ C HAEMNAIL K T ++Y + FPC +C K+++Q+GI+++ Y
Sbjct: 57 VGCYLVDGHCVRTIHAEMNAILQCAKFGESTDNAEIYVTDFPCLQCTKMLLQAGIRKINY 116
Query: 199 M 199
+
Sbjct: 117 L 117
Score = 40.4 bits (93), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 19/53 (35%), Positives = 33/53 (62%), Gaps = 2/53 (3%)
Query: 1 MNAILN--KNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIYMCDKHKQKPA 51
MNAIL K T ++Y + FPC +C K+++Q+GI+++ Y+ + H + A
Sbjct: 74 MNAILQCAKFGESTDNAEIYVTDFPCLQCTKMLLQAGIRKINYLRNYHNDEYA 126
>gi|146319276|ref|YP_001198988.1| deoxycytidylate deaminase [Streptococcus suis 05ZYH33]
gi|146321480|ref|YP_001201191.1| deoxycytidylate deaminase [Streptococcus suis 98HAH33]
gi|386578446|ref|YP_006074852.1| Deoxycytidylate deaminase [Streptococcus suis GZ1]
gi|145690082|gb|ABP90588.1| Deoxycytidylate deaminase [Streptococcus suis 05ZYH33]
gi|145692286|gb|ABP92791.1| Deoxycytidylate deaminase [Streptococcus suis 98HAH33]
gi|292558909|gb|ADE31910.1| Deoxycytidylate deaminase [Streptococcus suis GZ1]
Length = 161
Score = 76.3 bits (186), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 49/121 (40%), Positives = 66/121 (54%), Gaps = 9/121 (7%)
Query: 89 LEWHEYFMASAFLVAKRSKDPVTRVGAVIVNEDNKIVGTGYNGMPIG---CSDDE-FPWD 144
L W EYF A A L+A R+ +VGAV+V +DNK++ TGYNG G C D E D
Sbjct: 12 LAWDEYFAAQALLIANRATCKRAKVGAVLV-KDNKVIATGYNGSVSGTEHCLDQECLMID 70
Query: 145 KNTHDELDMCHAEMNAIL-NKNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIYMCDKQ 203
+ L HAE+NAIL K Y + FPC C+K ++Q G K V+Y+ + +
Sbjct: 71 GHCARTL---HAEVNAILQGAERGIPKGFTAYVTHFPCLNCSKQLLQVGCKRVVYINEYR 127
Query: 204 M 204
M
Sbjct: 128 M 128
>gi|384176182|ref|YP_005557567.1| ComE operon protein 2 [Bacillus subtilis subsp. subtilis str.
RO-NN-1]
gi|349595406|gb|AEP91593.1| ComE operon protein 2 [Bacillus subtilis subsp. subtilis str.
RO-NN-1]
Length = 189
Score = 75.9 bits (185), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 48/119 (40%), Positives = 67/119 (56%), Gaps = 10/119 (8%)
Query: 89 LEWHEYFMASAFLVAKRSKDPVTRVGAVIVNEDNKIVGTGYNGMPIG---CSDDE-FPWD 144
+ W++YFMA + L+A RS P VGA IV D +++ GYNG G C+D+ D
Sbjct: 4 ISWNQYFMAQSHLLALRSTCPRLSVGATIVR-DKRMIAGGYNGSIAGGVHCADEGCLMID 62
Query: 145 KNTHDELDMCHAEMNAIL--NKNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIYMCD 201
+ + HAEMNAIL +K T ++Y + +PC +C K IIQ+GIK V Y D
Sbjct: 63 DHCARTI---HAEMNAILQCSKFGVPTDGAEIYVTHYPCIQCCKSIIQAGIKTVYYAED 118
Score = 42.4 bits (98), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 29/76 (38%), Positives = 43/76 (56%), Gaps = 7/76 (9%)
Query: 1 MNAIL--NKNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIYMCDKHKQKPATIASKRM 58
MNAIL +K T ++Y + +PC +C K IIQ+GIK V Y D +K P ++ +
Sbjct: 73 MNAILQCSKFGVPTDGAEIYVTHYPCIQCCKSIIQAGIKTVYYAED-YKTHP---YAQEL 128
Query: 59 FDAAKVHYWS-EMDKM 73
F+ A V E+D+M
Sbjct: 129 FEQAGVTVEQVELDEM 144
>gi|157150018|ref|YP_001450270.1| ComE operon family protein [Streptococcus gordonii str. Challis
substr. CH1]
gi|157074812|gb|ABV09495.1| comE operon protein 2 family [Streptococcus gordonii str. Challis
substr. CH1]
Length = 155
Score = 75.9 bits (185), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 50/116 (43%), Positives = 62/116 (53%), Gaps = 9/116 (7%)
Query: 89 LEWHEYFMASAFLVAKRSKDPVTRVGAVIVNEDNKIVGTGYNGMPIG---CSDDE-FPWD 144
L W EYF A A L+A RS RVGAV+V +DNK++ TGYNG G C D E D
Sbjct: 6 LAWDEYFAAQALLIANRSTCKRARVGAVLV-KDNKVISTGYNGSVSGTEHCIDHECLIID 64
Query: 145 KNTHDELDMCHAEMNAILNKNSADT-KRCKLYTSLFPCNECAKVIIQSGIKEVIYM 199
+ L HAE+NAIL K Y + FPC C K ++Q G K V+Y+
Sbjct: 65 GHCVRTL---HAEVNAILQGAERGVPKGFTAYVTHFPCLNCTKQLLQVGCKRVVYI 117
>gi|392428711|ref|YP_006469722.1| cytidine and deoxycytidylate deaminase family protein
[Streptococcus intermedius JTH08]
gi|391757857|dbj|BAM23474.1| cytidine and deoxycytidylate deaminase family protein
[Streptococcus intermedius JTH08]
Length = 164
Score = 75.9 bits (185), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 51/121 (42%), Positives = 64/121 (52%), Gaps = 9/121 (7%)
Query: 89 LEWHEYFMASAFLVAKRSKDPVTRVGAVIVNEDNKIVGTGYNGMPIG---CSDDE-FPWD 144
L W EYF A A L+A RS VGAVIV +DNK++ TGYNG G C D E D
Sbjct: 15 LAWDEYFAAQALLIANRSTCKRASVGAVIV-KDNKVISTGYNGSVSGTEHCIDHECLMVD 73
Query: 145 KNTHDELDMCHAEMNAIL-NKNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIYMCDKQ 203
+ L HAE+NAIL K +Y + FPC C K ++Q G K V+Y+ +
Sbjct: 74 GHCVRTL---HAEVNAILQGAERGIPKGFTVYVTHFPCLNCTKQLLQVGCKRVVYINQYR 130
Query: 204 M 204
M
Sbjct: 131 M 131
>gi|392966065|ref|ZP_10331484.1| CMP/dCMP deaminase zinc-binding protein [Fibrisoma limi BUZ 3]
gi|387845129|emb|CCH53530.1| CMP/dCMP deaminase zinc-binding protein [Fibrisoma limi BUZ 3]
Length = 183
Score = 75.9 bits (185), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 51/132 (38%), Positives = 67/132 (50%), Gaps = 15/132 (11%)
Query: 76 VQNGSPHKRVDDVLEWHEYFMASAFLVAKRSKDPVTRVGAVIVNEDNKIVGTGYNGMPIG 135
+Q+G R DD+ FM A +AKRS +VGAV+ +D +I+ GYNG P G
Sbjct: 12 IQSGHVRPRFDDI------FMELAVNLAKRSHCIKAQVGAVL-TKDTRIISIGYNGPPAG 64
Query: 136 CS--DDEFPWDKNTHDELDMC----HAEMNAIL--NKNSADTKRCKLYTSLFPCNECAKV 187
DDEFP D C HAE NAIL KN ++ +Y +L PC CA++
Sbjct: 65 THNCDDEFPGVGCPRDSKGSCSLALHAEENAILYAAKNGSEVAGATIYVTLSPCIACARI 124
Query: 188 IIQSGIKEVIYM 199
I I VIY+
Sbjct: 125 IYSMKITRVIYL 136
>gi|262274059|ref|ZP_06051871.1| deoxycytidylate deaminase [Grimontia hollisae CIP 101886]
gi|262221869|gb|EEY73182.1| deoxycytidylate deaminase [Grimontia hollisae CIP 101886]
Length = 152
Score = 75.9 bits (185), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 47/109 (43%), Positives = 59/109 (54%), Gaps = 3/109 (2%)
Query: 88 VLEWHEYFMASAFLVAKRSKDPVTRVGAVIVNEDNKIVGTGYNGMPIGCSDDEFPWDKNT 147
+ +W F A LV SKDP T+VGAVI + N+IV G+NG P G SD D
Sbjct: 2 ISKWAVRFYQMAKLVGSWSKDPSTQVGAVI-TKGNRIVSVGFNGYPHGISDSAET-DGRE 59
Query: 148 HDELDMCHAEMNAILNKNSADTKRCKLYTSLFPCNECAKVIIQSGIKEV 196
L HAE NAIL D C+++ + FPC CA IIQ+GI +V
Sbjct: 60 MKLLKTLHAEENAILFAKR-DLLDCEIWVTHFPCPNCAAKIIQTGISQV 107
>gi|419776624|ref|ZP_14302546.1| putative ComE operon protein 2 [Streptococcus intermedius SK54]
gi|423070418|ref|ZP_17059194.1| hypothetical protein HMPREF9177_00511 [Streptococcus intermedius
F0413]
gi|424787697|ref|ZP_18214461.1| putative deoxycytidylate deaminase [Streptococcus intermedius BA1]
gi|355365779|gb|EHG13499.1| hypothetical protein HMPREF9177_00511 [Streptococcus intermedius
F0413]
gi|383846035|gb|EID83435.1| putative ComE operon protein 2 [Streptococcus intermedius SK54]
gi|422113451|gb|EKU17189.1| putative deoxycytidylate deaminase [Streptococcus intermedius BA1]
Length = 155
Score = 75.9 bits (185), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 51/121 (42%), Positives = 64/121 (52%), Gaps = 9/121 (7%)
Query: 89 LEWHEYFMASAFLVAKRSKDPVTRVGAVIVNEDNKIVGTGYNGMPIG---CSDDE-FPWD 144
L W EYF A A L+A RS VGAVIV +DNK++ TGYNG G C D E D
Sbjct: 6 LAWDEYFAAQALLIANRSTCKRASVGAVIV-KDNKVISTGYNGSVSGTEHCIDHECLMVD 64
Query: 145 KNTHDELDMCHAEMNAIL-NKNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIYMCDKQ 203
+ L HAE+NAIL K +Y + FPC C K ++Q G K V+Y+ +
Sbjct: 65 GHCVRTL---HAEVNAILQGAERGIPKGFTVYVTHFPCLNCTKQLLQVGCKRVVYINQYR 121
Query: 204 M 204
M
Sbjct: 122 M 122
>gi|16079612|ref|NP_390436.1| hypothetical protein BSU25580 [Bacillus subtilis subsp. subtilis
str. 168]
gi|221310483|ref|ZP_03592330.1| required for DNA binding and uptake (competence) [Bacillus subtilis
subsp. subtilis str. 168]
gi|221314807|ref|ZP_03596612.1| required for DNA binding and uptake (competence) [Bacillus subtilis
subsp. subtilis str. NCIB 3610]
gi|221319729|ref|ZP_03601023.1| required for DNA binding and uptake (competence) [Bacillus subtilis
subsp. subtilis str. JH642]
gi|221324007|ref|ZP_03605301.1| required for DNA binding and uptake (competence) [Bacillus subtilis
subsp. subtilis str. SMY]
gi|418032263|ref|ZP_12670746.1| required for DNA binding and uptake (competence) [Bacillus subtilis
subsp. subtilis str. SC-8]
gi|428280051|ref|YP_005561786.1| operon protein ComEB [Bacillus subtilis subsp. natto BEST195]
gi|430756363|ref|YP_007208902.1| ComE operon protein 2 [Bacillus subtilis subsp. subtilis str. BSP1]
gi|449095053|ref|YP_007427544.1| putative enzyme associated to DNA transport (competence) [Bacillus
subtilis XF-1]
gi|452915148|ref|ZP_21963774.1| comE operon protein 2 [Bacillus subtilis MB73/2]
gi|418361|sp|P32393.1|COMEB_BACSU RecName: Full=ComE operon protein 2
gi|289261|gb|AAC36906.1| comE ORF2 [Bacillus subtilis]
gi|1303797|dbj|BAA12453.1| ComEB [Bacillus subtilis]
gi|2635004|emb|CAB14500.1| putative enzyme associated to DNA transport (competence) [Bacillus
subtilis subsp. subtilis str. 168]
gi|291485008|dbj|BAI86083.1| operon protein ComEB [Bacillus subtilis subsp. natto BEST195]
gi|351471126|gb|EHA31247.1| required for DNA binding and uptake (competence) [Bacillus subtilis
subsp. subtilis str. SC-8]
gi|407959806|dbj|BAM53046.1| hypothetical protein BEST7613_4115 [Bacillus subtilis BEST7613]
gi|407965381|dbj|BAM58620.1| hypothetical protein BEST7003_2419 [Bacillus subtilis BEST7003]
gi|430020883|gb|AGA21489.1| ComE operon protein 2 [Bacillus subtilis subsp. subtilis str. BSP1]
gi|449028968|gb|AGE64207.1| putative enzyme associated to DNA transport (competence) [Bacillus
subtilis XF-1]
gi|452115496|gb|EME05892.1| comE operon protein 2 [Bacillus subtilis MB73/2]
Length = 189
Score = 75.9 bits (185), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 48/119 (40%), Positives = 67/119 (56%), Gaps = 10/119 (8%)
Query: 89 LEWHEYFMASAFLVAKRSKDPVTRVGAVIVNEDNKIVGTGYNGMPIG---CSDDE-FPWD 144
+ W++YFMA + L+A RS P VGA IV D +++ GYNG G C+D+ D
Sbjct: 4 ISWNQYFMAQSHLLALRSTCPRLSVGATIVR-DKRMIAGGYNGSIAGGVHCADEGCLMID 62
Query: 145 KNTHDELDMCHAEMNAIL--NKNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIYMCD 201
+ + HAEMNAIL +K T ++Y + +PC +C K IIQ+GIK V Y D
Sbjct: 63 DHCARTI---HAEMNAILQCSKFGVPTDGAEIYVTHYPCIQCCKSIIQAGIKTVYYAED 118
Score = 42.4 bits (98), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 29/76 (38%), Positives = 43/76 (56%), Gaps = 7/76 (9%)
Query: 1 MNAIL--NKNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIYMCDKHKQKPATIASKRM 58
MNAIL +K T ++Y + +PC +C K IIQ+GIK V Y D +K P ++ +
Sbjct: 73 MNAILQCSKFGVPTDGAEIYVTHYPCIQCCKSIIQAGIKTVYYAED-YKTHP---YAQEL 128
Query: 59 FDAAKVHYWS-EMDKM 73
F+ A V E+D+M
Sbjct: 129 FEQAGVTVEQVELDEM 144
>gi|386759157|ref|YP_006232373.1| Cytidine and deoxycytidylate deaminase zinc-binding region
[Bacillus sp. JS]
gi|384932439|gb|AFI29117.1| Cytidine and deoxycytidylate deaminase zinc-binding region
[Bacillus sp. JS]
Length = 189
Score = 75.9 bits (185), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 48/119 (40%), Positives = 67/119 (56%), Gaps = 10/119 (8%)
Query: 89 LEWHEYFMASAFLVAKRSKDPVTRVGAVIVNEDNKIVGTGYNGMPIG---CSDDE-FPWD 144
+ W++YFMA + L+A RS P VGA IV D +++ GYNG G C+D+ D
Sbjct: 4 ISWNQYFMAQSHLLALRSTCPRLSVGATIVR-DKRMIAGGYNGSIAGGVHCADEGCLMID 62
Query: 145 KNTHDELDMCHAEMNAIL--NKNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIYMCD 201
+ + HAEMNAIL +K T ++Y + +PC +C K IIQ+GIK V Y D
Sbjct: 63 DHCARTI---HAEMNAILQCSKFGVPTDGAEIYVTHYPCIQCCKSIIQAGIKTVYYAED 118
Score = 42.4 bits (98), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 29/76 (38%), Positives = 43/76 (56%), Gaps = 7/76 (9%)
Query: 1 MNAIL--NKNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIYMCDKHKQKPATIASKRM 58
MNAIL +K T ++Y + +PC +C K IIQ+GIK V Y D +K P ++ +
Sbjct: 73 MNAILQCSKFGVPTDGAEIYVTHYPCIQCCKSIIQAGIKTVYYAED-YKTNP---YAQEL 128
Query: 59 FDAAKVHYWS-EMDKM 73
F+ A V E+D+M
Sbjct: 129 FEQAGVTVEQVELDEM 144
>gi|218961643|ref|YP_001741418.1| cytidine/deoxycytidylate deaminase family protein [Candidatus
Cloacamonas acidaminovorans]
gi|167730300|emb|CAO81212.1| cytidine/deoxycytidylate deaminase family protein [Candidatus
Cloacamonas acidaminovorans str. Evry]
Length = 157
Score = 75.9 bits (185), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 48/121 (39%), Positives = 68/121 (56%), Gaps = 20/121 (16%)
Query: 91 WHEYFMASAFLVAKRSKDPVTRVGAVIVNEDNKIVGTGYNGMP--------IGCSDDE-- 140
W +YFM A+L +KRS +VGAV++ DN+I+ TGYNG P IGC ++
Sbjct: 6 WQQYFMEMAYLASKRSTCLRRKVGAVLIR-DNQIIATGYNGSPKGVPHCEDIGCLREQQK 64
Query: 141 FPWDKNTHDELDMC---HAEMNAILNK--NSADTKRCKLYTSLFPCNECAKVIIQSGIKE 195
P KN ++C HAE NAI+ N + T+ LY + PC+ CA++II + IK
Sbjct: 65 VPSGKNQ----ELCRGVHAEQNAIIQAAINGSSTRGAILYCTNQPCSICARLIINAEIKT 120
Query: 196 V 196
V
Sbjct: 121 V 121
>gi|312881768|ref|ZP_07741542.1| putative deoxycytidylate deaminase [Vibrio caribbenthicus ATCC
BAA-2122]
gi|309370519|gb|EFP97997.1| putative deoxycytidylate deaminase [Vibrio caribbenthicus ATCC
BAA-2122]
Length = 153
Score = 75.9 bits (185), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 47/108 (43%), Positives = 61/108 (56%), Gaps = 7/108 (6%)
Query: 88 VLEWHEYFMASAFLVAKRSKDPVTRVGAVIVNEDNKIVGTGYNGMPIGCSDDEFPWDKNT 147
+ +W + F A LV+ SKDP T+VGAVI + N+IV G+NG P G SD D
Sbjct: 2 ISKWAQRFYQMAELVSSWSKDPSTQVGAVITQQ-NRIVSVGFNGYPHGISDSAET-DDRE 59
Query: 148 HDELDMCHAEMNAIL--NKNSADTKRCKLYTSLFPCNECAKVIIQSGI 193
L HAE NAIL +N D C+++ + FPC CA IIQ+GI
Sbjct: 60 MKYLKTLHAEENAILFAKRNLDD---CEIWVTHFPCPNCAAKIIQTGI 104
>gi|237651567|ref|YP_002899037.1| putative deoxycytidylate deaminase [Roseophage DSS3P2]
gi|220898037|gb|ACL81295.1| putative deoxycytidylate deaminase [Silicibacter phage DSS3phi2]
Length = 142
Score = 75.9 bits (185), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 42/115 (36%), Positives = 58/115 (50%), Gaps = 1/115 (0%)
Query: 93 EYFMASAFLVAKRSKDPVTRVGAVIVNEDNKIVGTGYNGMPIGCSDDEFPWDKNTHDELD 152
E+ + A V+KRS+DP T+VGAVI+ D I GYNG P D E W
Sbjct: 7 EWALGLAEAVSKRSRDPSTKVGAVIIRPDKTIASMGYNGFPRTMEDKEEWWSDRPQKYSR 66
Query: 153 MCHAEMNAILNKNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIYMCDKQMSYK 207
+ H EMNA+LN LY + C CAK II +GI V++ +++ +
Sbjct: 67 VIHGEMNALLNAKEP-VLGMTLYCTHPCCEHCAKHIIAAGITRVVFGTSEEIRQR 120
>gi|376296456|ref|YP_005167686.1| CMP/dCMP deaminase zinc-binding protein [Desulfovibrio
desulfuricans ND132]
gi|323459017|gb|EGB14882.1| CMP/dCMP deaminase zinc-binding protein [Desulfovibrio
desulfuricans ND132]
Length = 152
Score = 75.9 bits (185), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 46/121 (38%), Positives = 62/121 (51%), Gaps = 12/121 (9%)
Query: 89 LEWHEYFMASAFLVAKRSKDPVTRVGAVIVNEDNKIVGTGYNGMP--------IGCSDDE 140
L W EYFM A LVA+RS VGA+ V D +I+ TGYNG+P +GC D+
Sbjct: 5 LPWPEYFMRIAHLVAQRSTCTRRAVGAIAV-RDKRILATGYNGVPTNIAHCDVVGCLRDQ 63
Query: 141 FPWDKNTHDEL-DMCHAEMNAILN--KNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVI 197
EL HAE N I+ N+ D K C +Y + PC C K++I G++ +
Sbjct: 64 LGIPSGERHELCRGLHAEQNVIIQAATNNLDLKGCDIYCTTKPCILCTKMLINCGVQNIY 123
Query: 198 Y 198
Y
Sbjct: 124 Y 124
>gi|288931740|ref|YP_003435800.1| CMP/dCMP deaminase zinc-binding protein [Ferroglobus placidus DSM
10642]
gi|288893988|gb|ADC65525.1| CMP/dCMP deaminase zinc-binding protein [Ferroglobus placidus DSM
10642]
Length = 149
Score = 75.9 bits (185), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 51/117 (43%), Positives = 62/117 (52%), Gaps = 12/117 (10%)
Query: 93 EYFMASAFLVAKRSKDPVTRVGAVIVNEDNKIVGTGYNGMP--------IGCSDDEFPWD 144
EYFM A +VAKRS VGAVIV +D +I+ TGYNG P IGC +E
Sbjct: 7 EYFMEIAKVVAKRSTCLRQNVGAVIV-KDKRILSTGYNGAPMGLPHCLDIGCLREELNVP 65
Query: 145 KNTHDEL-DMCHAEMNAILNK--NSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIY 198
EL HAE NAI+ + K LYT+ PC CAK+II +GI V+Y
Sbjct: 66 SGERHELCRAVHAEQNAIIQAAVHGVSIKGATLYTTHQPCIMCAKMIINAGIVRVVY 122
>gi|116621717|ref|YP_823873.1| zinc-binding CMP/dCMP deaminase [Candidatus Solibacter usitatus
Ellin6076]
gi|116224879|gb|ABJ83588.1| CMP/dCMP deaminase, zinc-binding [Candidatus Solibacter usitatus
Ellin6076]
Length = 133
Score = 75.9 bits (185), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 41/108 (37%), Positives = 59/108 (54%), Gaps = 2/108 (1%)
Query: 102 VAKRSKDPVTRVGAVIVNEDNKIVGTGYNGMPIGCSDDEFPWDKNTHDELDMCHAEMNAI 161
+A RSKDP T++G VIV +++I TGYN P G DD L + HAE NAI
Sbjct: 1 MAARSKDPNTQIGCVIVGPNHEIRSTGYNSFPRGIRDDVPERLVRPTKYLWIEHAERNAI 60
Query: 162 LNKNSAD--TKRCKLYTSLFPCNECAKVIIQSGIKEVIYMCDKQMSYK 207
N A T+ C +Y + PC +CA+ ++Q+GI V+ ++ Y
Sbjct: 61 CNAARAGTATEGCTIYVDIMPCMDCARAVVQAGIVAVVISAERMTQYS 108
Score = 39.3 bits (90), Expect = 0.98, Method: Compositional matrix adjust.
Identities = 17/49 (34%), Positives = 28/49 (57%), Gaps = 2/49 (4%)
Query: 2 NAILNKNSADT--KRCKLYTSLFPCNECAKVIIQSGIKEVIYMCDKHKQ 48
NAI N A T + C +Y + PC +CA+ ++Q+GI V+ ++ Q
Sbjct: 58 NAICNAARAGTATEGCTIYVDIMPCMDCARAVVQAGIVAVVISAERMTQ 106
>gi|11499353|ref|NP_070592.1| dCMP deaminase [Archaeoglobus fulgidus DSM 4304]
gi|2648787|gb|AAB89487.1| dCMP deaminase, putative [Archaeoglobus fulgidus DSM 4304]
Length = 157
Score = 75.9 bits (185), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 50/117 (42%), Positives = 61/117 (52%), Gaps = 12/117 (10%)
Query: 93 EYFMASAFLVAKRSKDPVTRVGAVIVNEDNKIVGTGYNGMP--------IGCSDDEFPWD 144
EYFM A +VAKRS VGAVIV +D +I+ TGYNG P +GC D
Sbjct: 8 EYFMEIASVVAKRSTCLRQHVGAVIV-KDKRILATGYNGAPSGLPHCEEVGCLRDRMSVP 66
Query: 145 KNTHDEL-DMCHAEMNAILN--KNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIY 198
EL HAE NAI+ K LY++ PC CAK+II +GIK V+Y
Sbjct: 67 SGERQELCRGVHAEQNAIIQAAKFGISVDGGTLYSTHCPCITCAKIIINAGIKRVVY 123
>gi|321312043|ref|YP_004204330.1| DNA transport protein [Bacillus subtilis BSn5]
gi|320018317|gb|ADV93303.1| putative enzyme associated to DNA transport (competence) [Bacillus
subtilis BSn5]
Length = 189
Score = 75.9 bits (185), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 48/119 (40%), Positives = 67/119 (56%), Gaps = 10/119 (8%)
Query: 89 LEWHEYFMASAFLVAKRSKDPVTRVGAVIVNEDNKIVGTGYNGMPIG---CSDDE-FPWD 144
+ W++YFMA + L+A RS P VGA IV D +++ GYNG G C+D+ D
Sbjct: 4 ISWNQYFMAQSHLLALRSTCPRLSVGATIVR-DKRMIAGGYNGSIAGGVHCADEGCLMID 62
Query: 145 KNTHDELDMCHAEMNAIL--NKNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIYMCD 201
+ + HAEMNAIL +K T ++Y + +PC +C K IIQ+GIK V Y D
Sbjct: 63 DHCARTI---HAEMNAILQCSKFGVPTDGAEIYVTHYPCIQCCKSIIQAGIKTVYYAED 118
Score = 42.4 bits (98), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 29/76 (38%), Positives = 43/76 (56%), Gaps = 7/76 (9%)
Query: 1 MNAIL--NKNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIYMCDKHKQKPATIASKRM 58
MNAIL +K T ++Y + +PC +C K IIQ+GIK V Y D +K P ++ +
Sbjct: 73 MNAILQCSKFGVPTDGAEIYVTHYPCIQCCKSIIQAGIKTVYYAED-YKTHP---YAQEL 128
Query: 59 FDAAKVHYWS-EMDKM 73
F+ A V E+D+M
Sbjct: 129 FEQAGVTVEQVELDEM 144
>gi|443631857|ref|ZP_21116037.1| ComE operon protein 2 [Bacillus subtilis subsp. inaquosorum KCTC
13429]
gi|443347972|gb|ELS62029.1| ComE operon protein 2 [Bacillus subtilis subsp. inaquosorum KCTC
13429]
Length = 189
Score = 75.9 bits (185), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 48/119 (40%), Positives = 67/119 (56%), Gaps = 10/119 (8%)
Query: 89 LEWHEYFMASAFLVAKRSKDPVTRVGAVIVNEDNKIVGTGYNGMPIG---CSDDE-FPWD 144
+ W++YFMA + L+A RS P VGA IV D +++ GYNG G C+D+ D
Sbjct: 4 ISWNQYFMAQSHLLALRSTCPRLSVGATIVR-DKRMIAGGYNGSIAGGVHCADEGCLMID 62
Query: 145 KNTHDELDMCHAEMNAIL--NKNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIYMCD 201
+ + HAEMNAIL +K T ++Y + +PC +C K IIQ+GIK V Y D
Sbjct: 63 DHCARTI---HAEMNAILQCSKFGVPTDGAEIYVTHYPCIQCCKSIIQAGIKTVYYAED 118
Score = 42.4 bits (98), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 29/76 (38%), Positives = 43/76 (56%), Gaps = 7/76 (9%)
Query: 1 MNAIL--NKNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIYMCDKHKQKPATIASKRM 58
MNAIL +K T ++Y + +PC +C K IIQ+GIK V Y D +K P ++ +
Sbjct: 73 MNAILQCSKFGVPTDGAEIYVTHYPCIQCCKSIIQAGIKTVYYAED-YKTNP---YAQEL 128
Query: 59 FDAAKVHYWS-EMDKM 73
F+ A V E+D+M
Sbjct: 129 FEQAGVTVEQVELDEM 144
>gi|259503079|ref|ZP_05745981.1| ComE operon protein 2 [Lactobacillus antri DSM 16041]
gi|259168945|gb|EEW53440.1| ComE operon protein 2 [Lactobacillus antri DSM 16041]
Length = 163
Score = 75.9 bits (185), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 49/123 (39%), Positives = 66/123 (53%), Gaps = 14/123 (11%)
Query: 83 KRVDDVLEWHEYFMASAFLVAKRSKDPVTRVGAVIVNEDNKIVGTGYNGMPIGCSDDEFP 142
KR+D W +YFM A L+A RS VGAV+V D +I+ GYNG S D+
Sbjct: 3 KRID----WDQYFMIQAALLASRSTCKRLSVGAVLV-RDKRIIAGGYNG---SVSGDDHC 54
Query: 143 WDKNTHDELDMC----HAEMNAILN--KNSADTKRCKLYTSLFPCNECAKVIIQSGIKEV 196
D+ + C HAEMNAIL + T LY + FPC +C K ++Q+GIKE+
Sbjct: 55 IDEGCYLRDGHCVRTIHAEMNAILQCARFGISTDGASLYVTDFPCLQCTKSLLQAGIKEI 114
Query: 197 IYM 199
Y+
Sbjct: 115 NYI 117
Score = 40.4 bits (93), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 20/48 (41%), Positives = 29/48 (60%), Gaps = 2/48 (4%)
Query: 1 MNAILN--KNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIYMCDKH 46
MNAIL + T LY + FPC +C K ++Q+GIKE+ Y+ + H
Sbjct: 74 MNAILQCARFGISTDGASLYVTDFPCLQCTKSLLQAGIKEINYIRNYH 121
>gi|161506809|ref|YP_001576763.1| dCMP deaminase [Lactobacillus helveticus DPC 4571]
gi|260102228|ref|ZP_05752465.1| cytidine/deoxycytidylate deaminase [Lactobacillus helveticus DSM
20075]
gi|160347798|gb|ABX26472.1| DCMP deaminase [Lactobacillus helveticus DPC 4571]
gi|260083969|gb|EEW68089.1| cytidine/deoxycytidylate deaminase [Lactobacillus helveticus DSM
20075]
Length = 159
Score = 75.9 bits (185), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 45/122 (36%), Positives = 68/122 (55%), Gaps = 12/122 (9%)
Query: 87 DVLEWHEYFMASAFLVAKRSKDPVTRVGAVIVNEDNKIVGTGYNGMPIGCSDDEFPWDKN 146
D + W +YFM A ++A+RS VG+V+V +DN+I+GTGYNG G + D+
Sbjct: 3 DRIPWKQYFMMQALVIAQRSTCNRALVGSVLV-KDNRIIGTGYNGSVSG----QPHCDEV 57
Query: 147 THDELD-----MCHAEMNAILN--KNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIYM 199
H +D H+EMNAI+ K T ++Y + FPC C K + Q+G+K++ Y
Sbjct: 58 GHQMVDGHCVRTIHSEMNAIIQCAKFGVSTDDTEIYVTHFPCYNCCKSLFQAGVKKINYY 117
Query: 200 CD 201
D
Sbjct: 118 FD 119
>gi|350266762|ref|YP_004878069.1| ComE operon protein 2 [Bacillus subtilis subsp. spizizenii TU-B-10]
gi|349599649|gb|AEP87437.1| ComE operon protein 2 [Bacillus subtilis subsp. spizizenii TU-B-10]
Length = 189
Score = 75.9 bits (185), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 48/119 (40%), Positives = 67/119 (56%), Gaps = 10/119 (8%)
Query: 89 LEWHEYFMASAFLVAKRSKDPVTRVGAVIVNEDNKIVGTGYNGMPIG---CSDDE-FPWD 144
+ W++YFMA + L+A RS P VGA IV D +++ GYNG G C+D+ D
Sbjct: 4 ISWNQYFMAQSHLLALRSTCPRLSVGATIVR-DKRMIAGGYNGSIAGGVHCADEGCLMID 62
Query: 145 KNTHDELDMCHAEMNAIL--NKNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIYMCD 201
+ + HAEMNAIL +K T ++Y + +PC +C K IIQ+GIK V Y D
Sbjct: 63 DHCARTI---HAEMNAILQCSKFGVPTDGAEIYVTHYPCIQCCKSIIQAGIKTVYYAED 118
Score = 42.0 bits (97), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 29/76 (38%), Positives = 43/76 (56%), Gaps = 7/76 (9%)
Query: 1 MNAIL--NKNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIYMCDKHKQKPATIASKRM 58
MNAIL +K T ++Y + +PC +C K IIQ+GIK V Y D +K P ++ +
Sbjct: 73 MNAILQCSKFGVPTDGAEIYVTHYPCIQCCKSIIQAGIKTVYYAED-YKTNP---YAQEL 128
Query: 59 FDAAKVHYWS-EMDKM 73
F+ A V E+D+M
Sbjct: 129 FEQAGVTVEQVELDEM 144
>gi|398311500|ref|ZP_10514974.1| ComE operon protein 2 [Bacillus mojavensis RO-H-1]
Length = 189
Score = 75.9 bits (185), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 48/119 (40%), Positives = 67/119 (56%), Gaps = 10/119 (8%)
Query: 89 LEWHEYFMASAFLVAKRSKDPVTRVGAVIVNEDNKIVGTGYNGMPIG---CSDDE-FPWD 144
+ W++YFMA + L+A RS P VGA IV D +++ GYNG G C+D+ D
Sbjct: 4 ISWNQYFMAQSHLLALRSTCPRLSVGATIVR-DKRMIAGGYNGSIAGGVHCADEGCLMID 62
Query: 145 KNTHDELDMCHAEMNAIL--NKNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIYMCD 201
+ + HAEMNAIL +K T ++Y + +PC +C K IIQ+GIK V Y D
Sbjct: 63 DHCARTI---HAEMNAILQCSKFGVPTDGAEIYVTHYPCIQCCKSIIQAGIKTVYYAED 118
Score = 40.8 bits (94), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 28/76 (36%), Positives = 43/76 (56%), Gaps = 7/76 (9%)
Query: 1 MNAIL--NKNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIYMCDKHKQKPATIASKRM 58
MNAIL +K T ++Y + +PC +C K IIQ+GIK V Y D +K P ++ +
Sbjct: 73 MNAILQCSKFGVPTDGAEIYVTHYPCIQCCKSIIQAGIKTVYYAED-YKTHP---YAQEL 128
Query: 59 FDAAKVHYWS-EMDKM 73
F+ + V E+D+M
Sbjct: 129 FEQSGVTVEQVELDEM 144
>gi|296333283|ref|ZP_06875736.1| putative enzyme associated to DNA transport (competence) [Bacillus
subtilis subsp. spizizenii ATCC 6633]
gi|305675213|ref|YP_003866885.1| hypothetical protein BSUW23_12690 [Bacillus subtilis subsp.
spizizenii str. W23]
gi|296149481|gb|EFG90377.1| putative enzyme associated to DNA transport (competence) [Bacillus
subtilis subsp. spizizenii ATCC 6633]
gi|305413457|gb|ADM38576.1| putative enzyme associated with DNA transport (competence)
[Bacillus subtilis subsp. spizizenii str. W23]
Length = 189
Score = 75.9 bits (185), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 48/119 (40%), Positives = 67/119 (56%), Gaps = 10/119 (8%)
Query: 89 LEWHEYFMASAFLVAKRSKDPVTRVGAVIVNEDNKIVGTGYNGMPIG---CSDDE-FPWD 144
+ W++YFMA + L+A RS P VGA IV D +++ GYNG G C+D+ D
Sbjct: 4 ISWNQYFMAQSHLLALRSTCPRLSVGATIVR-DKRMIAGGYNGSIAGGVHCADEGCLMID 62
Query: 145 KNTHDELDMCHAEMNAIL--NKNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIYMCD 201
+ + HAEMNAIL +K T ++Y + +PC +C K IIQ+GIK V Y D
Sbjct: 63 DHCARTI---HAEMNAILQCSKFGVPTDGAEIYVTHYPCIQCCKSIIQAGIKTVYYAED 118
Score = 42.4 bits (98), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 29/76 (38%), Positives = 43/76 (56%), Gaps = 7/76 (9%)
Query: 1 MNAIL--NKNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIYMCDKHKQKPATIASKRM 58
MNAIL +K T ++Y + +PC +C K IIQ+GIK V Y D +K P ++ +
Sbjct: 73 MNAILQCSKFGVPTDGAEIYVTHYPCIQCCKSIIQAGIKTVYYAED-YKTNP---YAQEL 128
Query: 59 FDAAKVHYWS-EMDKM 73
F+ A V E+D+M
Sbjct: 129 FEQAGVTVEQVELDEM 144
>gi|148264239|ref|YP_001230945.1| dCMP deaminase [Geobacter uraniireducens Rf4]
gi|146397739|gb|ABQ26372.1| dCMP deaminase [Geobacter uraniireducens Rf4]
Length = 156
Score = 75.9 bits (185), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 47/119 (39%), Positives = 62/119 (52%), Gaps = 12/119 (10%)
Query: 91 WHEYFMASAFLVAKRSKDPVTRVGAVIVNEDNKIVGTGYNGMP--------IGCSDDEFP 142
W EYFM LVAKRS +VGAVIV + N I+ TGYNG P +GC ++
Sbjct: 6 WDEYFMEITHLVAKRSTCLRRQVGAVIVKDKN-ILATGYNGAPSGVSHCLDVGCLREKLN 64
Query: 143 WDKNTHDEL-DMCHAEMNAILN--KNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIY 198
EL HAE NAI+ K+ LY + PC C+K++I +GIK ++Y
Sbjct: 65 IPSGERHELCRGLHAEQNAIIQAAKHGTTIDGSTLYCTTLPCIICSKMVINAGIKRIVY 123
>gi|52081108|ref|YP_079899.1| hypothetical protein BL02086 [Bacillus licheniformis DSM 13 = ATCC
14580]
gi|319644935|ref|ZP_07999168.1| late competence protein ComEB [Bacillus sp. BT1B_CT2]
gi|404489989|ref|YP_006714095.1| cytidine deaminase ComEB [Bacillus licheniformis DSM 13 = ATCC
14580]
gi|423683085|ref|ZP_17657924.1| hypothetical protein MUY_02938 [Bacillus licheniformis WX-02]
gi|18266365|gb|AAL67525.1|AF459916_2 late competence protein ComEB [Bacillus licheniformis]
gi|52004319|gb|AAU24261.1| ComEB [Bacillus licheniformis DSM 13 = ATCC 14580]
gi|52348988|gb|AAU41622.1| cytidine deaminase ComEB [Bacillus licheniformis DSM 13 = ATCC
14580]
gi|317392744|gb|EFV73538.1| late competence protein ComEB [Bacillus sp. BT1B_CT2]
gi|383439859|gb|EID47634.1| hypothetical protein MUY_02938 [Bacillus licheniformis WX-02]
Length = 189
Score = 75.9 bits (185), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 48/119 (40%), Positives = 66/119 (55%), Gaps = 10/119 (8%)
Query: 89 LEWHEYFMASAFLVAKRSKDPVTRVGAVIVNEDNKIVGTGYNGMPIG---CSDDE-FPWD 144
+ W +YFMA + L+A RS VGA IV D +I+ GYNG G C+D+ + D
Sbjct: 4 ISWDQYFMAQSHLLALRSTCTRLAVGATIVR-DKRIIAGGYNGSIAGGVHCADEGCYMVD 62
Query: 145 KNTHDELDMCHAEMNAILN--KNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIYMCD 201
+ + HAEMNAIL K T+ ++Y + FPC +C K IIQ+GIK + Y D
Sbjct: 63 GHC---IRTIHAEMNAILQCAKFGVPTEGAEIYVTHFPCIQCCKSIIQAGIKTIYYAKD 118
Score = 45.4 bits (106), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 30/76 (39%), Positives = 42/76 (55%), Gaps = 7/76 (9%)
Query: 1 MNAILN--KNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIYMCDKHKQKPATIASKRM 58
MNAIL K T+ ++Y + FPC +C K IIQ+GIK + Y D +K P + +
Sbjct: 73 MNAILQCAKFGVPTEGAEIYVTHFPCIQCCKSIIQAGIKTIYYAKD-YKNHPYAV---EL 128
Query: 59 FDAAKVHYWS-EMDKM 73
FD A V E+D+M
Sbjct: 129 FDQASVKVEQVELDEM 144
>gi|319939068|ref|ZP_08013432.1| ComE operon protein 2 family protein [Streptococcus anginosus
1_2_62CV]
gi|335030677|ref|ZP_08524161.1| putative ComE operon protein 2 [Streptococcus anginosus SK52 = DSM
20563]
gi|418963587|ref|ZP_13515422.1| putative ComE operon protein 2 [Streptococcus anginosus subsp.
whileyi CCUG 39159]
gi|319812118|gb|EFW08384.1| ComE operon protein 2 family protein [Streptococcus anginosus
1_2_62CV]
gi|333771283|gb|EGL48236.1| putative ComE operon protein 2 [Streptococcus anginosus SK52 = DSM
20563]
gi|383342911|gb|EID21111.1| putative ComE operon protein 2 [Streptococcus anginosus subsp.
whileyi CCUG 39159]
Length = 155
Score = 75.9 bits (185), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 51/121 (42%), Positives = 64/121 (52%), Gaps = 9/121 (7%)
Query: 89 LEWHEYFMASAFLVAKRSKDPVTRVGAVIVNEDNKIVGTGYNGMPIG---CSDDE-FPWD 144
L W EYF A A L+A RS VGAVIV +DNK++ TGYNG G C D E D
Sbjct: 6 LAWDEYFAAQALLIANRSTCKRASVGAVIV-KDNKVISTGYNGSVSGTEHCIDHECLIVD 64
Query: 145 KNTHDELDMCHAEMNAIL-NKNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIYMCDKQ 203
+ L HAE+NAIL K +Y + FPC C K ++Q G K V+Y+ +
Sbjct: 65 GHCVRTL---HAEVNAILQGAERGIPKGFTVYVTHFPCLNCTKQLLQVGCKRVVYINQYR 121
Query: 204 M 204
M
Sbjct: 122 M 122
>gi|317128288|ref|YP_004094570.1| ComE operon protein 2 [Bacillus cellulosilyticus DSM 2522]
gi|315473236|gb|ADU29839.1| ComE operon protein 2 [Bacillus cellulosilyticus DSM 2522]
Length = 188
Score = 75.9 bits (185), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 48/119 (40%), Positives = 66/119 (55%), Gaps = 6/119 (5%)
Query: 87 DVLEWHEYFMASAFLVAKRSKDPVTRVGAVIVNEDNKIVGTGYNGMPIGCSD--DEFPWD 144
D + WH+YFMA + L+A RS VGA IV D +I+ GYNG G DE +
Sbjct: 2 DRISWHQYFMAQSHLLALRSTCSRLMVGATIVR-DKRIIAGGYNGAISGGVHCIDEGCYV 60
Query: 145 KNTHDELDMCHAEMNAILN--KNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIYMCD 201
+ H + HAE+NA+L K T+ ++Y + FPC C K +IQ+GIK+V Y D
Sbjct: 61 IDDHC-VRTIHAEVNALLQCAKFGVATEGSEIYVTHFPCLNCCKALIQAGIKKVYYAND 118
Score = 38.9 bits (89), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 24/66 (36%), Positives = 37/66 (56%), Gaps = 6/66 (9%)
Query: 1 MNAILN--KNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIYMCDKHKQKPATIASKRM 58
+NA+L K T+ ++Y + FPC C K +IQ+GIK+V Y D +K P + +
Sbjct: 73 VNALLQCAKFGVATEGSEIYVTHFPCLNCCKALIQAGIKKVYYAND-YKNHPYAL---EL 128
Query: 59 FDAAKV 64
F+ A V
Sbjct: 129 FEQADV 134
>gi|256847006|ref|ZP_05552452.1| ComE operon protein 2 [Lactobacillus coleohominis 101-4-CHN]
gi|256715670|gb|EEU30645.1| ComE operon protein 2 [Lactobacillus coleohominis 101-4-CHN]
Length = 162
Score = 75.9 bits (185), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 45/117 (38%), Positives = 64/117 (54%), Gaps = 10/117 (8%)
Query: 89 LEWHEYFMASAFLVAKRSKDPVTRVGAVIVNEDNKIVGTGYNGMPIGCSDDEFPWDKNTH 148
++W +YFM A LVA R VGA++V D +I+G+GYNG G D+ D +
Sbjct: 5 IDWDQYFMVQAGLVASRGTCRRLSVGAILV-RDKRIIGSGYNGAVAG---DDHCIDVGCY 60
Query: 149 DELDMC----HAEMNAILN--KNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIYM 199
C HAEMNA+L K T LY + FPC +C K ++Q+GIK++ Y+
Sbjct: 61 MRDGHCVRTIHAEMNALLQCAKFGTPTDGAVLYVTDFPCLQCTKSLLQAGIKQINYL 117
Score = 39.7 bits (91), Expect = 0.74, Method: Compositional matrix adjust.
Identities = 20/53 (37%), Positives = 31/53 (58%), Gaps = 2/53 (3%)
Query: 1 MNAILN--KNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIYMCDKHKQKPA 51
MNA+L K T LY + FPC +C K ++Q+GIK++ Y+ + H + A
Sbjct: 74 MNALLQCAKFGTPTDGAVLYVTDFPCLQCTKSLLQAGIKQINYLRNYHNDEYA 126
>gi|313675037|ref|YP_004053033.1| cmp/dcmp deaminase zinc-binding protein [Marivirga tractuosa DSM
4126]
gi|312941735|gb|ADR20925.1| CMP/dCMP deaminase zinc-binding protein [Marivirga tractuosa DSM
4126]
Length = 160
Score = 75.5 bits (184), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 48/118 (40%), Positives = 64/118 (54%), Gaps = 9/118 (7%)
Query: 90 EWHEYFMASAFLVAKRSKDPVTRVGAVIVNEDNKIVGTGYNGMPIGCS--DDEFPWDKNT 147
++ + FM A +AKRS VGAV+ E +I+ GYNG P G D+EFP
Sbjct: 5 QFDDIFMELAVNLAKRSHCIKRHVGAVLTKE-TRIISIGYNGPPAGTHNCDEEFPGKGCG 63
Query: 148 HDELDMC----HAEMNAILN--KNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIYM 199
D C HAE NAI+ KN+A + LY +L PC CA++I GIK+VIY+
Sbjct: 64 LDSKGSCMLAIHAEQNAIMYAVKNNASVENSTLYVTLSPCLSCARIIFSMGIKKVIYL 121
Score = 41.2 bits (95), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 20/43 (46%), Positives = 28/43 (65%), Gaps = 2/43 (4%)
Query: 2 NAILN--KNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIYM 42
NAI+ KN+A + LY +L PC CA++I GIK+VIY+
Sbjct: 79 NAIMYAVKNNASVENSTLYVTLSPCLSCARIIFSMGIKKVIYL 121
>gi|423068476|ref|ZP_17057264.1| hypothetical protein HMPREF9682_00485 [Streptococcus intermedius
F0395]
gi|355366731|gb|EHG14448.1| hypothetical protein HMPREF9682_00485 [Streptococcus intermedius
F0395]
Length = 155
Score = 75.5 bits (184), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 51/121 (42%), Positives = 64/121 (52%), Gaps = 9/121 (7%)
Query: 89 LEWHEYFMASAFLVAKRSKDPVTRVGAVIVNEDNKIVGTGYNGMPIG---CSDDE-FPWD 144
L W EYF A A L+A RS VGAVIV +DNK++ TGYNG G C D E D
Sbjct: 6 LAWDEYFAAQALLIANRSTCKRASVGAVIV-KDNKVISTGYNGSVSGTEHCIDHECLMVD 64
Query: 145 KNTHDELDMCHAEMNAIL-NKNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIYMCDKQ 203
+ L HAE+NAIL K +Y + FPC C K ++Q G K V+Y+ +
Sbjct: 65 GHCVRTL---HAEVNAILQGAERGIPKGFTVYVTHFPCLNCTKQLLQVGCKRVVYINQYR 121
Query: 204 M 204
M
Sbjct: 122 M 122
>gi|315222930|ref|ZP_07864809.1| putative ComE operon protein 2 [Streptococcus anginosus F0211]
gi|315187880|gb|EFU21616.1| putative ComE operon protein 2 [Streptococcus anginosus F0211]
Length = 164
Score = 75.5 bits (184), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 51/121 (42%), Positives = 64/121 (52%), Gaps = 9/121 (7%)
Query: 89 LEWHEYFMASAFLVAKRSKDPVTRVGAVIVNEDNKIVGTGYNGMPIG---CSDDE-FPWD 144
L W EYF A A L+A RS VGAVIV +DNK++ TGYNG G C D E D
Sbjct: 15 LAWDEYFAAQALLIANRSTCKRASVGAVIV-KDNKVISTGYNGSVSGTEHCIDHECLIVD 73
Query: 145 KNTHDELDMCHAEMNAIL-NKNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIYMCDKQ 203
+ L HAE+NAIL K +Y + FPC C K ++Q G K V+Y+ +
Sbjct: 74 GHCVRTL---HAEVNAILQGAERGIPKGFTVYVTHFPCLNCTKQLLQVGCKRVVYINQYR 130
Query: 204 M 204
M
Sbjct: 131 M 131
>gi|375091168|ref|ZP_09737466.1| hypothetical protein HMPREF9709_00328 [Helcococcus kunzii ATCC
51366]
gi|374564339|gb|EHR35637.1| hypothetical protein HMPREF9709_00328 [Helcococcus kunzii ATCC
51366]
Length = 147
Score = 75.5 bits (184), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 44/111 (39%), Positives = 59/111 (53%), Gaps = 3/111 (2%)
Query: 91 WHEYFMASAFLVAKRSKDPVTRVGAVIVNEDNKIVGTGYNGMPIGCSD-DEFPWDKNTHD 149
W EYFM A +V++R VG V+VN+DN+IV TGYNG G DE
Sbjct: 5 WEEYFMNIAEIVSERGTCDRAYVGCVLVNKDNRIVSTGYNGSISGNPQCDEIGHKMRDGH 64
Query: 150 ELDMCHAEMNAIL--NKNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIY 198
+ HAE+NA++ K K Y + FPC C K +IQ+GI ++IY
Sbjct: 65 CIATIHAEINALIYCAKEGISVKNSVCYVTHFPCLNCTKALIQAGISKIIY 115
>gi|239827788|ref|YP_002950412.1| ComE operon protein 2 [Geobacillus sp. WCH70]
gi|239808081|gb|ACS25146.1| ComE operon protein 2 [Geobacillus sp. WCH70]
Length = 151
Score = 75.5 bits (184), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 48/117 (41%), Positives = 64/117 (54%), Gaps = 6/117 (5%)
Query: 89 LEWHEYFMASAFLVAKRSKDPVTRVGAVIVNEDNKIVGTGYNGMPIGCSD--DEFPWDKN 146
+ W +YFMA + L+A RS VGA IV D +I+ GYNG G + DE + +
Sbjct: 4 ITWDQYFMAQSHLLALRSTCTRLAVGATIVR-DKRIIAGGYNGSIAGGAHCIDEGCYVID 62
Query: 147 THDELDMCHAEMNAILN--KNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIYMCD 201
H + HAEMNAI+ K T+ ++Y + FPC C K IIQSGI+ V Y D
Sbjct: 63 GHC-VRTIHAEMNAIIQCAKFGVPTEGAEMYVTHFPCLHCCKAIIQSGIRAVYYAQD 118
Score = 44.7 bits (104), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 27/66 (40%), Positives = 37/66 (56%), Gaps = 6/66 (9%)
Query: 1 MNAILN--KNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIYMCDKHKQKPATIASKRM 58
MNAI+ K T+ ++Y + FPC C K IIQSGI+ V Y D +K P + +
Sbjct: 73 MNAIIQCAKFGVPTEGAEMYVTHFPCLHCCKAIIQSGIRAVYYAQD-YKNHPYAL---EL 128
Query: 59 FDAAKV 64
F+ AKV
Sbjct: 129 FEQAKV 134
>gi|387593895|gb|EIJ88919.1| CMP/dCMP deaminase [Nematocida parisii ERTm3]
gi|387595904|gb|EIJ93527.1| CMP/dCMP deaminase [Nematocida parisii ERTm1]
Length = 275
Score = 75.5 bits (184), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 47/118 (39%), Positives = 66/118 (55%), Gaps = 10/118 (8%)
Query: 91 WHEYFMASAFLVAKRSKDPVTRVGAVIVNEDNKIVGTGYNGMPIG---CSDDEFPW-DKN 146
W EYFM+ A + + RS +VGAV+V N+I+ GYNG G CSD + N
Sbjct: 128 WQEYFMSLAEMASLRSNCMKRKVGAVLVRH-NRIISVGYNGTSTGTTNCSDGGCERCNTN 186
Query: 147 THD--ELDMC---HAEMNAILNKNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIYM 199
H EL C HAE +A L +NS + +LYT+L+PC CA+ IIQ + ++ Y+
Sbjct: 187 IHKGKELSDCFCIHAEESAFLERNSLEVVGAQLYTTLYPCRLCARKIIQLKVSKLYYI 244
Score = 39.3 bits (90), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 16/41 (39%), Positives = 27/41 (65%)
Query: 2 NAILNKNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIYM 42
+A L +NS + +LYT+L+PC CA+ IIQ + ++ Y+
Sbjct: 204 SAFLERNSLEVVGAQLYTTLYPCRLCARKIIQLKVSKLYYI 244
>gi|199598395|ref|ZP_03211814.1| ComE operon protein 2 [Lactobacillus rhamnosus HN001]
gi|258508483|ref|YP_003171234.1| CMP/dCMP deaminase [Lactobacillus rhamnosus GG]
gi|385828148|ref|YP_005865920.1| competence protein [Lactobacillus rhamnosus GG]
gi|199590714|gb|EDY98801.1| ComE operon protein 2 [Lactobacillus rhamnosus HN001]
gi|257148410|emb|CAR87383.1| CMP/dCMP deaminase, zinc-binding protein [Lactobacillus rhamnosus
GG]
gi|259649793|dbj|BAI41955.1| competence protein [Lactobacillus rhamnosus GG]
Length = 154
Score = 75.5 bits (184), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 49/126 (38%), Positives = 66/126 (52%), Gaps = 8/126 (6%)
Query: 81 PHKRVDDVLEWHEYFMASAFLVAKRSKDPVTRVGAVIVNEDNKIVGTGYNGMPIG---CS 137
P KR W YF+ A V++RS VGAV+V E ++I+ TGYNG G C
Sbjct: 7 PSKRTVHRESWDHYFLELAKKVSERSTCERATVGAVLVQE-HRIIATGYNGAISGDPHC- 64
Query: 138 DDEFPWDKNTHDELDMCHAEMNAILN--KNSADTKRCKLYTSLFPCNECAKVIIQSGIKE 195
D+ ++ H + HAEMNAI+ N T +Y + FPC C K +IQ+GIK
Sbjct: 65 DEAGHLMRDGHC-IRTIHAEMNAIIQCAANGVSTHGATVYVNFFPCLNCTKALIQAGIKR 123
Query: 196 VIYMCD 201
V+Y D
Sbjct: 124 VVYAHD 129
Score = 43.9 bits (102), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 20/46 (43%), Positives = 26/46 (56%), Gaps = 2/46 (4%)
Query: 1 MNAILN--KNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIYMCD 44
MNAI+ N T +Y + FPC C K +IQ+GIK V+Y D
Sbjct: 84 MNAIIQCAANGVSTHGATVYVNFFPCLNCTKALIQAGIKRVVYAHD 129
>gi|295692075|ref|YP_003600685.1| dcmp deaminase [Lactobacillus crispatus ST1]
gi|295030181|emb|CBL49660.1| dCMP deaminase [Lactobacillus crispatus ST1]
Length = 159
Score = 75.5 bits (184), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 44/122 (36%), Positives = 69/122 (56%), Gaps = 12/122 (9%)
Query: 87 DVLEWHEYFMASAFLVAKRSKDPVTRVGAVIVNEDNKIVGTGYNGMPIGCSDDEFPWDKN 146
D + W +YFM A ++A+RS VG+V+V ++N+I+GTGYNG G + D
Sbjct: 3 DRIPWKQYFMMQALVIAQRSTCNRALVGSVLV-KNNRIIGTGYNGSVSG----QPHCDDV 57
Query: 147 THDELD-----MCHAEMNAILN--KNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIYM 199
H +D H+EMNAI+ K T+ ++Y + FPC C K ++Q+G+K++ Y
Sbjct: 58 GHQMVDGHCVRTIHSEMNAIIQCAKFGVSTENTEIYVTHFPCYNCCKSLLQAGVKKINYY 117
Query: 200 CD 201
D
Sbjct: 118 FD 119
Score = 37.4 bits (85), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 17/46 (36%), Positives = 28/46 (60%), Gaps = 2/46 (4%)
Query: 1 MNAILN--KNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIYMCD 44
MNAI+ K T+ ++Y + FPC C K ++Q+G+K++ Y D
Sbjct: 74 MNAIIQCAKFGVSTENTEIYVTHFPCYNCCKSLLQAGVKKINYYFD 119
>gi|258539694|ref|YP_003174193.1| CMP/dCMP deaminase zinc-binding protein [Lactobacillus rhamnosus Lc
705]
gi|385835344|ref|YP_005873118.1| putative deoxycytidylate deaminase [Lactobacillus rhamnosus ATCC
8530]
gi|417022206|ref|ZP_11947420.1| CMP/dCMP deaminase zinc-binding protein [Lactobacillus rhamnosus
MTCC 5462]
gi|418070698|ref|ZP_12707973.1| CMP/dCMP deaminase zinc-binding protein [Lactobacillus rhamnosus
R0011]
gi|421770852|ref|ZP_16207530.1| dCMP deaminase / Late competence protein ComEB [Lactobacillus
rhamnosus LRHMDP2]
gi|421771184|ref|ZP_16207845.1| dCMP deaminase / Late competence protein ComEB [Lactobacillus
rhamnosus LRHMDP3]
gi|257151370|emb|CAR90342.1| CMP/dCMP deaminase, zinc-binding protein [Lactobacillus rhamnosus
Lc 705]
gi|328480168|gb|EGF49113.1| CMP/dCMP deaminase zinc-binding protein [Lactobacillus rhamnosus
MTCC 5462]
gi|355394835|gb|AER64265.1| putative deoxycytidylate deaminase [Lactobacillus rhamnosus ATCC
8530]
gi|357540118|gb|EHJ24135.1| CMP/dCMP deaminase zinc-binding protein [Lactobacillus rhamnosus
R0011]
gi|411181233|gb|EKS48421.1| dCMP deaminase / Late competence protein ComEB [Lactobacillus
rhamnosus LRHMDP2]
gi|411186619|gb|EKS53743.1| dCMP deaminase / Late competence protein ComEB [Lactobacillus
rhamnosus LRHMDP3]
Length = 154
Score = 75.5 bits (184), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 49/126 (38%), Positives = 66/126 (52%), Gaps = 8/126 (6%)
Query: 81 PHKRVDDVLEWHEYFMASAFLVAKRSKDPVTRVGAVIVNEDNKIVGTGYNGMPIG---CS 137
P KR W YF+ A V++RS VGAV+V E ++I+ TGYNG G C
Sbjct: 7 PSKRTVHRESWDHYFLELAKKVSERSTCERATVGAVLVQE-HRIIATGYNGAISGDPHC- 64
Query: 138 DDEFPWDKNTHDELDMCHAEMNAILN--KNSADTKRCKLYTSLFPCNECAKVIIQSGIKE 195
D+ ++ H + HAEMNAI+ N T +Y + FPC C K +IQ+GIK
Sbjct: 65 DEAGHLMRDGHC-IRTIHAEMNAIIQCAANGVSTHGATVYVNFFPCLNCTKALIQAGIKR 123
Query: 196 VIYMCD 201
V+Y D
Sbjct: 124 VVYAHD 129
Score = 43.9 bits (102), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 20/46 (43%), Positives = 26/46 (56%), Gaps = 2/46 (4%)
Query: 1 MNAILN--KNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIYMCD 44
MNAI+ N T +Y + FPC C K +IQ+GIK V+Y D
Sbjct: 84 MNAIIQCAANGVSTHGATVYVNFFPCLNCTKALIQAGIKRVVYAHD 129
>gi|88798973|ref|ZP_01114554.1| putative deoxycytidylate deaminase [Reinekea blandensis MED297]
gi|88778200|gb|EAR09394.1| putative deoxycytidylate deaminase [Reinekea sp. MED297]
Length = 149
Score = 75.5 bits (184), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 49/111 (44%), Positives = 60/111 (54%), Gaps = 7/111 (6%)
Query: 88 VLEWHEYFMASAFLVAKRSKDPVTRVGAVIVNEDNKIVGTGYNGMPIGCSDDEFPWDKNT 147
+ +W F A LV+ SKDP T+VGAVI E N+IV G+NG P G SD D
Sbjct: 2 ISKWSVRFYQMAKLVSSWSKDPSTQVGAVI-TEQNRIVSLGFNGYPHGISDSAET-DDRE 59
Query: 148 HDELDMCHAEMNAIL--NKNSADTKRCKLYTSLFPCNECAKVIIQSGIKEV 196
L HAE NAIL +N D C ++ + FPC CA IIQ+GI V
Sbjct: 60 MKLLKTLHAEENAILFAKRNLDD---CDIWVTHFPCPNCAAKIIQTGISTV 107
>gi|227877964|ref|ZP_03995968.1| competence protein ComEB family protein [Lactobacillus crispatus
JV-V01]
gi|256844344|ref|ZP_05549830.1| dCMP deaminase [Lactobacillus crispatus 125-2-CHN]
gi|256849252|ref|ZP_05554685.1| dCMP deaminase [Lactobacillus crispatus MV-1A-US]
gi|293381479|ref|ZP_06627474.1| putative ComE operon protein 2 [Lactobacillus crispatus 214-1]
gi|312978355|ref|ZP_07790097.1| cytidine/deoxycytidylate deaminase family protein [Lactobacillus
crispatus CTV-05]
gi|227862434|gb|EEJ69949.1| competence protein ComEB family protein [Lactobacillus crispatus
JV-V01]
gi|256613422|gb|EEU18625.1| dCMP deaminase [Lactobacillus crispatus 125-2-CHN]
gi|256714028|gb|EEU29016.1| dCMP deaminase [Lactobacillus crispatus MV-1A-US]
gi|290921949|gb|EFD98956.1| putative ComE operon protein 2 [Lactobacillus crispatus 214-1]
gi|310894698|gb|EFQ43770.1| cytidine/deoxycytidylate deaminase family protein [Lactobacillus
crispatus CTV-05]
Length = 159
Score = 75.5 bits (184), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 44/122 (36%), Positives = 69/122 (56%), Gaps = 12/122 (9%)
Query: 87 DVLEWHEYFMASAFLVAKRSKDPVTRVGAVIVNEDNKIVGTGYNGMPIGCSDDEFPWDKN 146
D + W +YFM A ++A+RS VG+V+V ++N+I+GTGYNG G + D
Sbjct: 3 DRIPWKQYFMMQALVIAQRSTCNRALVGSVLV-KNNRIIGTGYNGSVSG----QPHCDDV 57
Query: 147 THDELD-----MCHAEMNAILN--KNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIYM 199
H +D H+EMNAI+ K T+ ++Y + FPC C K ++Q+G+K++ Y
Sbjct: 58 GHQMVDGHCVRTIHSEMNAIIQCAKFGVSTENTEIYVTHFPCYNCCKSLLQAGVKKINYY 117
Query: 200 CD 201
D
Sbjct: 118 FD 119
Score = 37.4 bits (85), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 17/46 (36%), Positives = 28/46 (60%), Gaps = 2/46 (4%)
Query: 1 MNAILN--KNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIYMCD 44
MNAI+ K T+ ++Y + FPC C K ++Q+G+K++ Y D
Sbjct: 74 MNAIIQCAKFGVSTENTEIYVTHFPCYNCCKSLLQAGVKKINYYFD 119
>gi|423077971|ref|ZP_17066658.1| putative ComE operon protein 2 [Lactobacillus rhamnosus ATCC 21052]
gi|357552351|gb|EHJ34124.1| putative ComE operon protein 2 [Lactobacillus rhamnosus ATCC 21052]
Length = 149
Score = 75.5 bits (184), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 49/126 (38%), Positives = 66/126 (52%), Gaps = 8/126 (6%)
Query: 81 PHKRVDDVLEWHEYFMASAFLVAKRSKDPVTRVGAVIVNEDNKIVGTGYNGMPIG---CS 137
P KR W YF+ A V++RS VGAV+V E ++I+ TGYNG G C
Sbjct: 2 PSKRTVHRESWDHYFLELAKKVSERSTCERATVGAVLVQE-HRIIATGYNGAISGDPHC- 59
Query: 138 DDEFPWDKNTHDELDMCHAEMNAILN--KNSADTKRCKLYTSLFPCNECAKVIIQSGIKE 195
D+ ++ H + HAEMNAI+ N T +Y + FPC C K +IQ+GIK
Sbjct: 60 DEAGHLMRDGHC-IRTIHAEMNAIIQCAANGVSTHGATVYVNFFPCLNCTKALIQAGIKR 118
Query: 196 VIYMCD 201
V+Y D
Sbjct: 119 VVYAHD 124
Score = 43.9 bits (102), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 20/46 (43%), Positives = 26/46 (56%), Gaps = 2/46 (4%)
Query: 1 MNAILN--KNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIYMCD 44
MNAI+ N T +Y + FPC C K +IQ+GIK V+Y D
Sbjct: 79 MNAIIQCAANGVSTHGATVYVNFFPCLNCTKALIQAGIKRVVYAHD 124
>gi|317122494|ref|YP_004102497.1| CMP/dCMP deaminase zinc-binding protein [Thermaerobacter
marianensis DSM 12885]
gi|315592474|gb|ADU51770.1| CMP/dCMP deaminase zinc-binding protein [Thermaerobacter
marianensis DSM 12885]
Length = 171
Score = 75.5 bits (184), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 47/114 (41%), Positives = 64/114 (56%), Gaps = 8/114 (7%)
Query: 90 EWHEYFMASAFLVAKRSKDPVTRVGAVIVNEDNKIVGTGYNGMPIG---CSDDEFPWDKN 146
W YFM A +VAKRS P VGAV+V D +I+ TGYNG P G C+D+ ++
Sbjct: 24 SWDAYFMELAEVVAKRSTCPRRHVGAVLV-RDRRILATGYNGAPPGFPHCTDEGC-LMQD 81
Query: 147 THDELDMCHAEMNAILNK--NSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIY 198
H + HAE NAIL + + LYT+ PC CAK++I +G+ V+Y
Sbjct: 82 GHC-VRTIHAEANAILQAALHGVTVRGSTLYTTATPCLHCAKLLIGAGVVRVVY 134
>gi|444335765|ref|YP_007392134.1| dCMP deaminase [Blattabacterium sp. (Blatta orientalis) str.
Tarazona]
gi|444300144|gb|AGD98381.1| dCMP deaminase [Blattabacterium sp. (Blatta orientalis) str.
Tarazona]
Length = 135
Score = 75.5 bits (184), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 46/99 (46%), Positives = 61/99 (61%), Gaps = 7/99 (7%)
Query: 112 RVGAVIVNEDNKIVGTGYNGMPIGCSDDEFPWDKNTHDELDMCHAEMNAILNKNSADTKR 171
+VGA+IV ++N+I+ GYNG P G D DKN + + HAE NAIL K S +
Sbjct: 11 KVGAIIV-KNNRIISDGYNGTPSGF--DNICEDKNGETKWYVLHAEANAIL-KMSTSSYS 66
Query: 172 CK---LYTSLFPCNECAKVIIQSGIKEVIYMCDKQMSYK 207
CK LY + FPC EC+K+I QS IK V+Y+ D + S K
Sbjct: 67 CKGAFLYITHFPCKECSKLIYQSKIKRVVYLYDHKYSIK 105
Score = 43.1 bits (100), Expect = 0.063, Method: Compositional matrix adjust.
Identities = 24/46 (52%), Positives = 30/46 (65%), Gaps = 4/46 (8%)
Query: 2 NAILNKNSADTKRCK---LYTSLFPCNECAKVIIQSGIKEVIYMCD 44
NAIL K S + CK LY + FPC EC+K+I QS IK V+Y+ D
Sbjct: 55 NAIL-KMSTSSYSCKGAFLYITHFPCKECSKLIYQSKIKRVVYLYD 99
>gi|262282453|ref|ZP_06060221.1| comE operon protein 2 family protein [Streptococcus sp. 2_1_36FAA]
gi|262261744|gb|EEY80442.1| comE operon protein 2 family protein [Streptococcus sp. 2_1_36FAA]
Length = 155
Score = 75.5 bits (184), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 50/116 (43%), Positives = 61/116 (52%), Gaps = 9/116 (7%)
Query: 89 LEWHEYFMASAFLVAKRSKDPVTRVGAVIVNEDNKIVGTGYNGMPIG---CSDDE-FPWD 144
L W EYF A A L+A RS RVGAV+V E NK++ TGYNG G C D E D
Sbjct: 6 LAWDEYFAAQALLIANRSTCKRARVGAVLVKE-NKVISTGYNGSVSGTEHCIDHECLVVD 64
Query: 145 KNTHDELDMCHAEMNAILNKNSADT-KRCKLYTSLFPCNECAKVIIQSGIKEVIYM 199
+ L HAE+NAIL K Y + FPC C K ++Q G K V+Y+
Sbjct: 65 GHCVRTL---HAEVNAILQGAERGVPKGFTAYVTHFPCLNCTKQLLQVGCKRVVYI 117
>gi|229552285|ref|ZP_04441010.1| competence protein ComEB [Lactobacillus rhamnosus LMS2-1]
gi|229314357|gb|EEN80330.1| competence protein ComEB [Lactobacillus rhamnosus LMS2-1]
Length = 170
Score = 75.5 bits (184), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 49/126 (38%), Positives = 66/126 (52%), Gaps = 8/126 (6%)
Query: 81 PHKRVDDVLEWHEYFMASAFLVAKRSKDPVTRVGAVIVNEDNKIVGTGYNGMPIG---CS 137
P KR W YF+ A V++RS VGAV+V E ++I+ TGYNG G C
Sbjct: 23 PSKRTVHRESWDHYFLELAKKVSERSTCERATVGAVLVQE-HRIIATGYNGAISGDPHC- 80
Query: 138 DDEFPWDKNTHDELDMCHAEMNAILN--KNSADTKRCKLYTSLFPCNECAKVIIQSGIKE 195
D+ ++ H + HAEMNAI+ N T +Y + FPC C K +IQ+GIK
Sbjct: 81 DEAGHLMRDGHC-IRTIHAEMNAIIQCAANGVSTHGATVYVNFFPCLNCTKALIQAGIKR 139
Query: 196 VIYMCD 201
V+Y D
Sbjct: 140 VVYAHD 145
Score = 43.9 bits (102), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 20/46 (43%), Positives = 26/46 (56%), Gaps = 2/46 (4%)
Query: 1 MNAILN--KNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIYMCD 44
MNAI+ N T +Y + FPC C K +IQ+GIK V+Y D
Sbjct: 100 MNAIIQCAANGVSTHGATVYVNFFPCLNCTKALIQAGIKRVVYAHD 145
>gi|322420509|ref|YP_004199732.1| dCMP deaminase [Geobacter sp. M18]
gi|320126896|gb|ADW14456.1| dCMP deaminase [Geobacter sp. M18]
Length = 151
Score = 75.5 bits (184), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 47/120 (39%), Positives = 64/120 (53%), Gaps = 12/120 (10%)
Query: 91 WHEYFMASAFLVAKRSKDPVTRVGAVIVNEDNKIVGTGYNGMP--------IGCSDDEFP 142
W EYF+ LVAKRS +VGAV+V + N I+ TGYNG P IGC ++
Sbjct: 6 WDEYFIEITRLVAKRSTCLRRQVGAVLVKDKN-ILATGYNGAPSGTSHCLDIGCLREKMG 64
Query: 143 WDKNTHDEL-DMCHAEMNAILN--KNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIYM 199
EL HAE NAI+ K+ + LY + PC C+K++I +GIK V+Y+
Sbjct: 65 IPSGERHELCRGLHAEQNAIIQAAKHGTSIEGATLYCNTMPCIICSKMVINAGIKRVVYL 124
>gi|189500555|ref|YP_001960025.1| zinc-binding CMP/dCMP deaminase [Chlorobium phaeobacteroides BS1]
gi|189495996|gb|ACE04544.1| CMP/dCMP deaminase zinc-binding [Chlorobium phaeobacteroides BS1]
Length = 174
Score = 75.5 bits (184), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 45/122 (36%), Positives = 65/122 (53%), Gaps = 13/122 (10%)
Query: 89 LEWHEYFMASAFLVAKRSKDPVTRVGAVIVNEDNKIVGTGYNGMPIG---CSDDEFPWDK 145
L WHEYFM+ A L+++R+ +GAV+V DN I+ TGYNG P G C++
Sbjct: 26 LGWHEYFMSVAHLISRRATCTRGHIGAVLV-RDNNILSTGYNGAPSGLPHCNETTCRIYS 84
Query: 146 NTHDE-------LDMCHAEMNAILN--KNSADTKRCKLYTSLFPCNECAKVIIQSGIKEV 196
+ H + ++ HAE+NAI K+ K +Y + PC C KV+I GIK +
Sbjct: 85 SKHPDGTVEENCVNTIHAEINAIAQAAKHGVSIKDADIYITASPCIHCLKVLINVGIKTI 144
Query: 197 IY 198
Y
Sbjct: 145 YY 146
>gi|310831344|ref|YP_003969987.1| putative deoxycytidylate deaminase [Cafeteria roenbergensis virus
BV-PW1]
gi|309386528|gb|ADO67388.1| putative deoxycytidylate deaminase [Cafeteria roenbergensis virus
BV-PW1]
Length = 144
Score = 75.5 bits (184), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 46/132 (34%), Positives = 69/132 (52%), Gaps = 12/132 (9%)
Query: 70 MDKMNGVQNGSPHKRVDDVLEWHEYFMASAFLVAKRSKDPVTRVGAVIVNEDNKIVGTGY 129
MD +N V N + LEW++YF++ A L + RS +VG VIV ++ +I+ TGY
Sbjct: 1 MDLLNSVINKNYR------LEWNDYFISIAILTSLRSTSIKKKVGCVIV-KNKRIIATGY 53
Query: 130 NGMPIGCSDDEFPWDKNTHDELDMCHAEMNAILN--KNSADTKRCKLYTSLFPCNECAKV 187
NG P G + E++ HAE NAI K + LY + +PC C+K+
Sbjct: 54 NGFPPGVEHISILKEG---KEINTIHAEQNAISQCAKMGISCENSVLYVTHYPCINCSKI 110
Query: 188 IIQSGIKEVIYM 199
I+ SGI + Y+
Sbjct: 111 IVASGISTIYYL 122
>gi|429204377|ref|ZP_19195666.1| ComE operon protein 2 [Lactobacillus saerimneri 30a]
gi|428147318|gb|EKW99545.1| ComE operon protein 2 [Lactobacillus saerimneri 30a]
Length = 157
Score = 75.1 bits (183), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 45/120 (37%), Positives = 66/120 (55%), Gaps = 10/120 (8%)
Query: 86 DDVLEWHEYFMASAFLVAKRSKDPVTRVGAVIVNEDNKIVGTGYNGMPIGCSDDEFPWDK 145
D + W++YFM A L++ RS VGA+IV DN+I+ GYNG S D+ D
Sbjct: 4 DKRIPWNQYFMLQAILLSMRSTCERLSVGAIIV-RDNRIIAGGYNG---AVSGDDHCIDV 59
Query: 146 NTHDELDMC----HAEMNAILN--KNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIYM 199
+ C HAEMNA+L K T ++Y + FPC +C K ++Q+GIK++ Y+
Sbjct: 60 GCYIRDGHCMRTIHAEMNAVLQCAKFGIPTADAEIYVTDFPCLQCTKSLLQAGIKKIHYL 119
Score = 37.0 bits (84), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 17/44 (38%), Positives = 28/44 (63%), Gaps = 2/44 (4%)
Query: 1 MNAILN--KNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIYM 42
MNA+L K T ++Y + FPC +C K ++Q+GIK++ Y+
Sbjct: 76 MNAVLQCAKFGIPTADAEIYVTDFPCLQCTKSLLQAGIKKIHYL 119
>gi|347525702|ref|YP_004832450.1| ComE operon protein 2 [Lactobacillus ruminis ATCC 27782]
gi|345284661|gb|AEN78514.1| ComE operon protein 2 [Lactobacillus ruminis ATCC 27782]
Length = 159
Score = 75.1 bits (183), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 43/117 (36%), Positives = 66/117 (56%), Gaps = 10/117 (8%)
Query: 89 LEWHEYFMASAFLVAKRSKDPVTRVGAVIVNEDNKIVGTGYNGMPIGCSDDEFPWDKNTH 148
+ W++YFM A L++ RS VGA++V DN+I+ GYNG S D D+ +
Sbjct: 6 ISWNQYFMLQAILLSLRSTCTRLAVGAILV-RDNRIIAGGYNG---SVSGDVHCLDEGCY 61
Query: 149 DELDMC----HAEMNAILN--KNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIYM 199
C HAEMNA+L K + T +Y + FPC +C K+++Q+GIK++ Y+
Sbjct: 62 VVGGHCVRTIHAEMNAVLQCAKFGSGTDGAVIYVTDFPCLQCTKMLLQAGIKKIYYL 118
Score = 40.4 bits (93), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 19/54 (35%), Positives = 32/54 (59%), Gaps = 2/54 (3%)
Query: 1 MNAILN--KNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIYMCDKHKQKPAT 52
MNA+L K + T +Y + FPC +C K+++Q+GIK++ Y+ + H A
Sbjct: 75 MNAVLQCAKFGSGTDGAVIYVTDFPCLQCTKMLLQAGIKKIYYLRNYHNDPYAV 128
>gi|312110156|ref|YP_003988472.1| ComE operon protein 2 [Geobacillus sp. Y4.1MC1]
gi|336234620|ref|YP_004587236.1| ComE operon protein 2 [Geobacillus thermoglucosidasius C56-YS93]
gi|423719191|ref|ZP_17693373.1| late competence protein comEB, deoxycytidylate deaminase
[Geobacillus thermoglucosidans TNO-09.020]
gi|311215257|gb|ADP73861.1| ComE operon protein 2 [Geobacillus sp. Y4.1MC1]
gi|335361475|gb|AEH47155.1| ComE operon protein 2 [Geobacillus thermoglucosidasius C56-YS93]
gi|383368094|gb|EID45369.1| late competence protein comEB, deoxycytidylate deaminase
[Geobacillus thermoglucosidans TNO-09.020]
Length = 151
Score = 75.1 bits (183), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 48/117 (41%), Positives = 64/117 (54%), Gaps = 6/117 (5%)
Query: 89 LEWHEYFMASAFLVAKRSKDPVTRVGAVIVNEDNKIVGTGYNGMPIGCSD--DEFPWDKN 146
+ W +YFMA + L+A RS VGA IV D +I+ GYNG G + DE + +
Sbjct: 4 ITWDQYFMAQSHLLALRSTCTRLAVGATIV-RDKRIIAGGYNGSIAGGAHCIDEGCYIID 62
Query: 147 THDELDMCHAEMNAILN--KNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIYMCD 201
H + HAEMNAI+ K T+ ++Y + FPC C K IIQSGI+ V Y D
Sbjct: 63 GHC-VRTIHAEMNAIIQCAKFGVPTEGAEMYVTHFPCLHCCKAIIQSGIRAVYYAQD 118
Score = 41.6 bits (96), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 26/66 (39%), Positives = 35/66 (53%), Gaps = 6/66 (9%)
Query: 1 MNAILN--KNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIYMCDKHKQKPATIASKRM 58
MNAI+ K T+ ++Y + FPC C K IIQSGI+ V Y D +K P + +
Sbjct: 73 MNAIIQCAKFGVPTEGAEMYVTHFPCLHCCKAIIQSGIRAVYYAQD-YKNDPYAL---EL 128
Query: 59 FDAAKV 64
F A V
Sbjct: 129 FQQANV 134
>gi|228993069|ref|ZP_04152992.1| ComE operon protein 2 [Bacillus pseudomycoides DSM 12442]
gi|228999119|ref|ZP_04158701.1| ComE operon protein 2 [Bacillus mycoides Rock3-17]
gi|229006667|ref|ZP_04164301.1| ComE operon protein 2 [Bacillus mycoides Rock1-4]
gi|228754528|gb|EEM03939.1| ComE operon protein 2 [Bacillus mycoides Rock1-4]
gi|228760736|gb|EEM09700.1| ComE operon protein 2 [Bacillus mycoides Rock3-17]
gi|228766717|gb|EEM15357.1| ComE operon protein 2 [Bacillus pseudomycoides DSM 12442]
Length = 185
Score = 75.1 bits (183), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 48/119 (40%), Positives = 64/119 (53%), Gaps = 10/119 (8%)
Query: 89 LEWHEYFMASAFLVAKRSKDPVTRVGAVIVNEDNKIVGTGYNGMPIG---CSDDE-FPWD 144
+ W +YFM + L++ RS VGA IV D +I+ GYNG G C DD + D
Sbjct: 4 ISWDQYFMTQSHLLSLRSTCTRLAVGATIVR-DKRIIAGGYNGSITGGVHCIDDGCYIID 62
Query: 145 KNTHDELDMCHAEMNAILN--KNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIYMCD 201
+ + HAEMNA+L K A T+ ++Y + FPC +C K IIQSGI V Y D
Sbjct: 63 NHC---VRTIHAEMNALLQCAKFGAKTEGAEIYVTHFPCLQCCKAIIQSGITAVYYAQD 118
Score = 44.7 bits (104), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 27/66 (40%), Positives = 37/66 (56%), Gaps = 6/66 (9%)
Query: 1 MNAILN--KNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIYMCDKHKQKPATIASKRM 58
MNA+L K A T+ ++Y + FPC +C K IIQSGI V Y D +K P + +
Sbjct: 73 MNALLQCAKFGAKTEGAEIYVTHFPCLQCCKAIIQSGITAVYYAQD-YKNHPYAV---EL 128
Query: 59 FDAAKV 64
F+ A V
Sbjct: 129 FEQANV 134
>gi|421491165|ref|ZP_15938532.1| putative ComE operon protein 2 [Streptococcus anginosus SK1138]
gi|400372162|gb|EJP25111.1| putative ComE operon protein 2 [Streptococcus anginosus SK1138]
Length = 155
Score = 75.1 bits (183), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 50/116 (43%), Positives = 62/116 (53%), Gaps = 9/116 (7%)
Query: 89 LEWHEYFMASAFLVAKRSKDPVTRVGAVIVNEDNKIVGTGYNGMPIG---CSDDE-FPWD 144
L W EYF A A L+A RS VGAVIV +DNK++ TGYNG G C D E D
Sbjct: 6 LAWDEYFAAQALLIANRSTCKRASVGAVIV-KDNKVISTGYNGSVSGTEHCIDHECLIVD 64
Query: 145 KNTHDELDMCHAEMNAIL-NKNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIYM 199
+ L HAE+NAIL K +Y + FPC C K ++Q G K V+Y+
Sbjct: 65 GHCVRTL---HAEVNAILQGAERGIPKGFTVYVTHFPCLNCTKQLLQVGCKRVVYI 117
>gi|299535731|ref|ZP_07049052.1| ComE operon protein 2 [Lysinibacillus fusiformis ZC1]
gi|424739114|ref|ZP_18167536.1| ComE operon protein 2 [Lysinibacillus fusiformis ZB2]
gi|298728931|gb|EFI69485.1| ComE operon protein 2 [Lysinibacillus fusiformis ZC1]
gi|422946979|gb|EKU41381.1| ComE operon protein 2 [Lysinibacillus fusiformis ZB2]
Length = 189
Score = 75.1 bits (183), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 48/119 (40%), Positives = 63/119 (52%), Gaps = 10/119 (8%)
Query: 89 LEWHEYFMASAFLVAKRSKDPVTRVGAVIVNEDNKIVGTGYNGMPIGCSDDEFPWDKNTH 148
+ W ++FMA + L+A RS VGA +V D +I+ GYNG G DE +K +
Sbjct: 4 ITWDQFFMAQSHLLALRSTCTRLAVGATVVR-DKRIIAGGYNGSITG---DEHCIEKGCY 59
Query: 149 DELDMC----HAEMNAILN--KNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIYMCD 201
+ C HAEMNA+L K TK LY + FPC C K IIQ+GI+ V Y D
Sbjct: 60 VVDNHCVRTVHAEMNALLQCAKYGTPTKGADLYVTHFPCLPCTKSIIQAGIERVYYATD 118
Score = 42.4 bits (98), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 27/66 (40%), Positives = 35/66 (53%), Gaps = 6/66 (9%)
Query: 1 MNAILN--KNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIYMCDKHKQKPATIASKRM 58
MNA+L K TK LY + FPC C K IIQ+GI+ V Y D +K P ++ +
Sbjct: 73 MNALLQCAKYGTPTKGADLYVTHFPCLPCTKSIIQAGIERVYYATD-YKNNP---YAQEL 128
Query: 59 FDAAKV 64
F A V
Sbjct: 129 FAKAGV 134
>gi|441503263|ref|ZP_20985270.1| dCMP deaminase [Photobacterium sp. AK15]
gi|441429479|gb|ELR66934.1| dCMP deaminase [Photobacterium sp. AK15]
Length = 149
Score = 75.1 bits (183), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 47/109 (43%), Positives = 60/109 (55%), Gaps = 3/109 (2%)
Query: 88 VLEWHEYFMASAFLVAKRSKDPVTRVGAVIVNEDNKIVGTGYNGMPIGCSDDEFPWDKNT 147
+ +W F A LV SKDP T+VGAVI + N+IV G+NG P G SD D++
Sbjct: 2 ISKWAVRFFQMAELVGSWSKDPSTQVGAVI-TQGNRIVSVGFNGYPHGISDSADIDDRDM 60
Query: 148 HDELDMCHAEMNAILNKNSADTKRCKLYTSLFPCNECAKVIIQSGIKEV 196
L HAE NAIL + D C ++ + FPC CA IIQ+GI V
Sbjct: 61 K-LLKTLHAEENAILF-SKRDLAGCDIWVTHFPCPNCAAKIIQTGISVV 107
>gi|366053357|ref|ZP_09451079.1| competence protein comEB [Lactobacillus suebicus KCTC 3549]
Length = 158
Score = 75.1 bits (183), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 49/123 (39%), Positives = 65/123 (52%), Gaps = 14/123 (11%)
Query: 83 KRVDDVLEWHEYFMASAFLVAKRSKDPVTRVGAVIVNEDNKIVGTGYNGMPIGCSDDEFP 142
KR+D W YFM A L+A RS VGA IV D +I+ GYNG S D+
Sbjct: 4 KRID----WDHYFMIQAALLASRSTCKRLSVGATIV-RDKRIIAGGYNG---SVSGDDHC 55
Query: 143 WDKNTHDELDMC----HAEMNAILN--KNSADTKRCKLYTSLFPCNECAKVIIQSGIKEV 196
D + + C HAEMNAIL K T +Y + FPC +C K+++Q+GIK++
Sbjct: 56 IDSDCYLVDGHCVRTIHAEMNAILQCAKFGVSTDGASIYVTDFPCLQCTKMLLQAGIKQI 115
Query: 197 IYM 199
YM
Sbjct: 116 NYM 118
Score = 42.7 bits (99), Expect = 0.099, Method: Compositional matrix adjust.
Identities = 21/53 (39%), Positives = 32/53 (60%), Gaps = 2/53 (3%)
Query: 1 MNAILN--KNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIYMCDKHKQKPA 51
MNAIL K T +Y + FPC +C K+++Q+GIK++ YM + H + A
Sbjct: 75 MNAILQCAKFGVSTDGASIYVTDFPCLQCTKMLLQAGIKQINYMRNYHNDEYA 127
>gi|237651485|ref|YP_002898956.1| putative deoxycytidylate deaminase [Roseophage EE36P1]
gi|220898117|gb|ACL81374.1| hypothetical protein [Sulfitobacter phage EE36phi1]
Length = 142
Score = 75.1 bits (183), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 41/115 (35%), Positives = 58/115 (50%), Gaps = 1/115 (0%)
Query: 93 EYFMASAFLVAKRSKDPVTRVGAVIVNEDNKIVGTGYNGMPIGCSDDEFPWDKNTHDELD 152
++ + A V+KRS+DP T+VGAVI+ D I GYNG P D E W
Sbjct: 7 QWALGLAEAVSKRSRDPSTKVGAVIIRPDKTIASMGYNGFPRTMEDKEEWWSDRPQKYSR 66
Query: 153 MCHAEMNAILNKNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIYMCDKQMSYK 207
+ H EMNA+LN LY + C CAK II +GI V++ +++ +
Sbjct: 67 VIHGEMNALLNAKEP-VLAMTLYCTHPCCEHCAKHIIAAGISRVVFGTSEEIRQR 120
>gi|319789749|ref|YP_004151382.1| CMP/dCMP deaminase zinc-binding protein [Thermovibrio ammonificans
HB-1]
gi|317114251|gb|ADU96741.1| CMP/dCMP deaminase zinc-binding protein [Thermovibrio ammonificans
HB-1]
Length = 148
Score = 75.1 bits (183), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 47/119 (39%), Positives = 66/119 (55%), Gaps = 12/119 (10%)
Query: 91 WHEYFMASAFLVAKRSKDPVTRVGAVIVNEDNKIVGTGYNGMP--------IGCSDDEFP 142
W EYFM+ A +VA RS +VGAV+V +D +I+ TGYNG P +GC ++
Sbjct: 6 WDEYFMSIAQMVATRSTCLRRQVGAVLV-KDKRIISTGYNGPPSGLKHPEEVGCLREKLG 64
Query: 143 WDKNTHDEL-DMCHAEMNAILNK--NSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIY 198
EL HAE NAI+ + TK LY + PC+ C K++I +GI++VIY
Sbjct: 65 IPSGERHELCRGLHAEQNAIIQAALHGVSTKGSVLYCTHCPCSLCVKMLINAGIEKVIY 123
>gi|334316180|ref|YP_004548799.1| CMP/dCMP deaminase zinc-binding protein [Sinorhizobium meliloti
AK83]
gi|334095174|gb|AEG53185.1| CMP/dCMP deaminase zinc-binding protein [Sinorhizobium meliloti
AK83]
Length = 150
Score = 75.1 bits (183), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 44/112 (39%), Positives = 63/112 (56%), Gaps = 4/112 (3%)
Query: 88 VLEWHEYFMASAFLVAKRSKDPVTRVGAVIVNEDNKIVGTGYNGMPIGCSDDEFPWDKNT 147
++EW Y+ A AK+SKD T+VGAV+V + +I TGYNG P G +D + ++ T
Sbjct: 1 MMEWPAYYFGFAEHAAKKSKDS-TQVGAVLVGPEGEIRLTGYNGPPRGVNDTKMRRERPT 59
Query: 148 HDELDMCHAEMN--AILNKNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVI 197
L HAE N A + TK C +Y + PC CA+ +IQ+GI V+
Sbjct: 60 -KYLFASHAEANLIAFAAREGIRTKLCHVYVTHHPCAACARTLIQAGISCVV 110
>gi|227894427|ref|ZP_04012232.1| competence protein ComEB [Lactobacillus ultunensis DSM 16047]
gi|227863797|gb|EEJ71218.1| competence protein ComEB [Lactobacillus ultunensis DSM 16047]
Length = 159
Score = 75.1 bits (183), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 44/122 (36%), Positives = 69/122 (56%), Gaps = 12/122 (9%)
Query: 87 DVLEWHEYFMASAFLVAKRSKDPVTRVGAVIVNEDNKIVGTGYNGMPIGCSDDEFPWDKN 146
D + W +YFM A ++A+RS VG+V+V +D++I+GTGYNG G + D
Sbjct: 3 DRIPWKQYFMIQALVIAQRSTCNRALVGSVLV-KDHRIIGTGYNGSVSG----QPHCDDV 57
Query: 147 THDELD-----MCHAEMNAILN--KNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIYM 199
H +D H+EMNAI+ K T+ ++Y + FPC C K ++Q+G+K++ Y
Sbjct: 58 GHQMVDGHCVRTIHSEMNAIIQCAKFGVSTENTEIYVTHFPCYNCCKSLLQAGVKKINYY 117
Query: 200 CD 201
D
Sbjct: 118 FD 119
Score = 37.7 bits (86), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 22/74 (29%), Positives = 41/74 (55%), Gaps = 5/74 (6%)
Query: 1 MNAILN--KNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIYMCDKHKQKPATIASKRM 58
MNAI+ K T+ ++Y + FPC C K ++Q+G+K++ Y D ++ P +A K +
Sbjct: 74 MNAIIQCAKFGVSTENTEIYVTHFPCYNCCKSLLQAGVKKINYYFD-YRDNP--LAMKLL 130
Query: 59 FDAAKVHYWSEMDK 72
D + ++D+
Sbjct: 131 HDCGVPYEQIKIDR 144
>gi|311746929|ref|ZP_07720714.1| cytidine/deoxycytidylate deaminase family protein [Algoriphagus sp.
PR1]
gi|126578621|gb|EAZ82785.1| cytidine/deoxycytidylate deaminase family protein [Algoriphagus sp.
PR1]
Length = 160
Score = 75.1 bits (183), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 47/118 (39%), Positives = 63/118 (53%), Gaps = 9/118 (7%)
Query: 90 EWHEYFMASAFLVAKRSKDPVTRVGAVIVNEDNKIVGTGYNGMPIGCS--DDEFPWDKNT 147
++ + FM A +AKRS VGAV+ E +I+ GYNG P G DDEFP +
Sbjct: 5 DFDDIFMELAVNLAKRSHCIKKHVGAVLTKE-TRIISIGYNGPPAGTHNCDDEFPENGCA 63
Query: 148 HDELDMC----HAEMNAILN--KNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIYM 199
D C HAE NAIL KN+ + LY +L PC CA++I GI +V+Y+
Sbjct: 64 RDSKGSCSLALHAEQNAILYAVKNNTSVEGSTLYVTLAPCLACARIIFSMGISKVVYL 121
Score = 37.7 bits (86), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 18/43 (41%), Positives = 26/43 (60%), Gaps = 2/43 (4%)
Query: 2 NAILN--KNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIYM 42
NAIL KN+ + LY +L PC CA++I GI +V+Y+
Sbjct: 79 NAILYAVKNNTSVEGSTLYVTLAPCLACARIIFSMGISKVVYL 121
>gi|423162002|ref|ZP_17148874.1| cytidine and deoxycytidylate deaminase zinc-binding region family
protein [Vibrio cholerae HC-33A2]
gi|443529742|ref|ZP_21095759.1| cytidine and deoxycytidylate deaminase zinc-binding region family
protein [Vibrio cholerae HC-7A1]
gi|356440832|gb|EHH93764.1| cytidine and deoxycytidylate deaminase zinc-binding region family
protein [Vibrio cholerae HC-33A2]
gi|443459312|gb|ELT26706.1| cytidine and deoxycytidylate deaminase zinc-binding region family
protein [Vibrio cholerae HC-7A1]
Length = 150
Score = 75.1 bits (183), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 46/98 (46%), Positives = 56/98 (57%), Gaps = 3/98 (3%)
Query: 99 AFLVAKRSKDPVTRVGAVIVNEDNKIVGTGYNGMPIGCSDDEFPWDKNTHDELDMCHAEM 158
A LV SKDP T+VGAVI + N+IV G+NG P G SD D++ L HAE
Sbjct: 2 AELVGSWSKDPSTQVGAVITKQ-NRIVSVGFNGYPHGISDSASTDDRDM-KYLKTLHAEE 59
Query: 159 NAILNKNSADTKRCKLYTSLFPCNECAKVIIQSGIKEV 196
NAIL D C++Y + FPC CA IIQ+GI V
Sbjct: 60 NAILFAKR-DLDGCEIYVTHFPCPNCAAKIIQTGISAV 96
>gi|393213143|gb|EJC98640.1| hypothetical protein FOMMEDRAFT_170881 [Fomitiporia mediterranea
MF3/22]
Length = 410
Score = 75.1 bits (183), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 46/127 (36%), Positives = 65/127 (51%), Gaps = 15/127 (11%)
Query: 91 WHEYFMASAFLVAKRSKDPVTRVGAVIVNEDNKIVGTGYNGMPIGCSD----------DE 140
W YFM A L + RS RVGA++V +D+ I+ TGYNG P G + +
Sbjct: 266 WDSYFMKLAALASHRSNCMKRRVGAILV-KDHSIIATGYNGTPYGVPNCNEGGCRRCNEG 324
Query: 141 FPWDKNTHDELDMCHAEMNAILNKNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIYMC 200
P + +E HAE NA+L K C +Y + PC +C I+Q+GI+EV+Y
Sbjct: 325 VPRSVDGFEECLCIHAEENALLEAGRERGKGCVIYCNTCPCLKCTIKIVQNGIREVVY-- 382
Query: 201 DKQMSYK 207
+SYK
Sbjct: 383 --NLSYK 387
Score = 36.6 bits (83), Expect = 5.8, Method: Compositional matrix adjust.
Identities = 21/63 (33%), Positives = 32/63 (50%), Gaps = 4/63 (6%)
Query: 2 NAILNKNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIYMCDKHKQKPATIASKRMFDA 61
NA+L K C +Y + PC +C I+Q+GI+EV+Y +S R+F+
Sbjct: 343 NALLEAGRERGKGCVIYCNTCPCLKCTIKIVQNGIREVVYNLSYKMDA----SSARVFEI 398
Query: 62 AKV 64
A V
Sbjct: 399 AGV 401
>gi|343525105|ref|ZP_08762061.1| putative ComE operon protein 2 [Streptococcus constellatus subsp.
pharyngis SK1060 = CCUG 46377]
gi|418964786|ref|ZP_13516574.1| putative ComE operon protein 2 [Streptococcus constellatus subsp.
constellatus SK53]
gi|343396977|gb|EGV09513.1| putative ComE operon protein 2 [Streptococcus constellatus subsp.
pharyngis SK1060 = CCUG 46377]
gi|383344187|gb|EID22356.1| putative ComE operon protein 2 [Streptococcus constellatus subsp.
constellatus SK53]
Length = 155
Score = 75.1 bits (183), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 51/121 (42%), Positives = 63/121 (52%), Gaps = 9/121 (7%)
Query: 89 LEWHEYFMASAFLVAKRSKDPVTRVGAVIVNEDNKIVGTGYNGMPIG---CSDDE-FPWD 144
L W EYF A A L+A RS VGAVIV E NK++ TGYNG G C D E D
Sbjct: 6 LAWDEYFAAQALLIANRSTCKRASVGAVIVKE-NKVISTGYNGSVSGTEHCIDHECLMVD 64
Query: 145 KNTHDELDMCHAEMNAIL-NKNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIYMCDKQ 203
+ L HAE+NAIL K +Y + FPC C K ++Q G K V+Y+ +
Sbjct: 65 GHCVRTL---HAEVNAILQGAERGIPKGFTVYVTHFPCLNCTKQLLQVGCKRVVYINQYR 121
Query: 204 M 204
M
Sbjct: 122 M 122
>gi|423561205|ref|ZP_17537481.1| ComE operon protein 2 [Bacillus cereus MSX-A1]
gi|401201462|gb|EJR08327.1| ComE operon protein 2 [Bacillus cereus MSX-A1]
Length = 185
Score = 75.1 bits (183), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 48/119 (40%), Positives = 64/119 (53%), Gaps = 10/119 (8%)
Query: 89 LEWHEYFMASAFLVAKRSKDPVTRVGAVIVNEDNKIVGTGYNGMPIG---CSDDE-FPWD 144
+ W +YFM + L++ RS VGA IV D +I+ GYNG G C DD + D
Sbjct: 4 ISWDQYFMTQSHLLSLRSTCTRLAVGATIVR-DKRIIAGGYNGSIKGGVHCIDDGCYVID 62
Query: 145 KNTHDELDMCHAEMNAILN--KNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIYMCD 201
+ + HAEMNA+L K A T+ ++Y + FPC +C K IIQSGI V Y D
Sbjct: 63 NHC---VRTIHAEMNALLQCAKFGAKTEEAEIYVTHFPCLQCCKAIIQSGITAVYYAQD 118
Score = 45.8 bits (107), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 28/66 (42%), Positives = 37/66 (56%), Gaps = 6/66 (9%)
Query: 1 MNAILN--KNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIYMCDKHKQKPATIASKRM 58
MNA+L K A T+ ++Y + FPC +C K IIQSGI V Y D +K P I +
Sbjct: 73 MNALLQCAKFGAKTEEAEIYVTHFPCLQCCKAIIQSGITAVYYAQD-YKNHPYAI---EL 128
Query: 59 FDAAKV 64
F+ A V
Sbjct: 129 FEQANV 134
>gi|403237566|ref|ZP_10916152.1| hypothetical protein B1040_17534 [Bacillus sp. 10403023]
Length = 189
Score = 75.1 bits (183), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 47/117 (40%), Positives = 66/117 (56%), Gaps = 6/117 (5%)
Query: 89 LEWHEYFMASAFLVAKRSKDPVTRVGAVIVNEDNKIVGTGYNGMPIGCSD--DEFPWDKN 146
++W++YFMA + L+A RS VGA IV D +I+ GYNG G + DE + +
Sbjct: 4 IKWNQYFMAQSHLLALRSTCTRLTVGATIV-RDKRIIAGGYNGSVSGGTHCIDEGCYVVD 62
Query: 147 THDELDMCHAEMNAILN--KNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIYMCD 201
H + HAE+NA+L K T ++Y + FPC +C K IIQ+GIK V Y D
Sbjct: 63 NHC-IRTVHAEINALLQCAKFGVPTDNAEIYVTHFPCLQCTKAIIQAGIKVVYYAED 118
Score = 42.4 bits (98), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 24/66 (36%), Positives = 37/66 (56%), Gaps = 6/66 (9%)
Query: 1 MNAILN--KNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIYMCDKHKQKPATIASKRM 58
+NA+L K T ++Y + FPC +C K IIQ+GIK V+Y + +K P I +
Sbjct: 73 INALLQCAKFGVPTDNAEIYVTHFPCLQCTKAIIQAGIK-VVYYAEDYKNHPYAI---EL 128
Query: 59 FDAAKV 64
F+ + V
Sbjct: 129 FEKSNV 134
>gi|306825613|ref|ZP_07458952.1| cytidine and deoxycytidylate deaminase [Streptococcus sp. oral
taxon 071 str. 73H25AP]
gi|315612824|ref|ZP_07887735.1| cytidine and deoxycytidylate deaminase [Streptococcus sanguinis
ATCC 49296]
gi|414158157|ref|ZP_11414451.1| ComE operon protein 2 [Streptococcus sp. F0441]
gi|417940649|ref|ZP_12583937.1| putative ComE operon protein 2 [Streptococcus oralis SK313]
gi|419779665|ref|ZP_14305535.1| putative ComE operon protein 2 [Streptococcus oralis SK10]
gi|304431974|gb|EFM34951.1| cytidine and deoxycytidylate deaminase [Streptococcus sp. oral
taxon 071 str. 73H25AP]
gi|315314934|gb|EFU62975.1| cytidine and deoxycytidylate deaminase [Streptococcus sanguinis
ATCC 49296]
gi|343389530|gb|EGV02115.1| putative ComE operon protein 2 [Streptococcus oralis SK313]
gi|383186053|gb|EIC78529.1| putative ComE operon protein 2 [Streptococcus oralis SK10]
gi|410870702|gb|EKS18659.1| ComE operon protein 2 [Streptococcus sp. F0441]
Length = 155
Score = 75.1 bits (183), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 48/120 (40%), Positives = 63/120 (52%), Gaps = 7/120 (5%)
Query: 89 LEWHEYFMASAFLVAKRSKDPVTRVGAVIVNEDNKIVGTGYNGMPIG---CSDDEFPWDK 145
L W EYF A A L+A RS +VGAV+V +DNK++ TGYNG G C D E +
Sbjct: 6 LAWDEYFAAQALLIANRSTCKRAKVGAVLV-KDNKVISTGYNGSVSGTEHCIDHECLVIE 64
Query: 146 NTHDELDMCHAEMNAILNKNSADTKR-CKLYTSLFPCNECAKVIIQSGIKEVIYMCDKQM 204
+ HAE+NAIL R Y + FPC C K ++Q G K V+Y+ +M
Sbjct: 65 G--HCVRTLHAEVNAILQGAERGVPRGFTAYVTHFPCLNCTKQLLQVGCKRVVYINQYRM 122
>gi|257087478|ref|ZP_05581839.1| cytidine/deoxycytidylate deaminase [Enterococcus faecalis D6]
gi|307277118|ref|ZP_07558222.1| ComE operon protein 2 [Enterococcus faecalis TX2134]
gi|421513018|ref|ZP_15959806.1| dCMP deaminase [Enterococcus faecalis ATCC 29212]
gi|422724718|ref|ZP_16781194.1| ComE operon protein 2 [Enterococcus faecalis TX2137]
gi|424675635|ref|ZP_18112532.1| ComE operon protein 2 [Enterococcus faecalis 599]
gi|256995508|gb|EEU82810.1| cytidine/deoxycytidylate deaminase [Enterococcus faecalis D6]
gi|306506048|gb|EFM75214.1| ComE operon protein 2 [Enterococcus faecalis TX2134]
gi|315025365|gb|EFT37297.1| ComE operon protein 2 [Enterococcus faecalis TX2137]
gi|401673847|gb|EJS80217.1| dCMP deaminase [Enterococcus faecalis ATCC 29212]
gi|402350271|gb|EJU85175.1| ComE operon protein 2 [Enterococcus faecalis 599]
Length = 167
Score = 75.1 bits (183), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 45/117 (38%), Positives = 67/117 (57%), Gaps = 6/117 (5%)
Query: 89 LEWHEYFMASAFLVAKRSKDPVTRVGAVIVNEDNKIVGTGYNGMPIGCSD--DEFPWDKN 146
+ W +YFM + L++ RS VGA IV D +I+ GYNG G + DE + +
Sbjct: 4 IPWDQYFMGQSVLLSLRSTCTRLTVGATIVR-DKRIIAGGYNGSVSGGTHCIDEGCYVVD 62
Query: 147 THDELDMCHAEMNAILN--KNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIYMCD 201
H + HAEMNAIL K T+ ++Y + FPC +C K+I+Q+GIK++ Y+ D
Sbjct: 63 NHC-VRTIHAEMNAILQCAKFGVPTEGAEIYVTHFPCLQCTKMILQAGIKKIYYLKD 118
Score = 43.1 bits (100), Expect = 0.065, Method: Compositional matrix adjust.
Identities = 20/46 (43%), Positives = 31/46 (67%), Gaps = 2/46 (4%)
Query: 1 MNAILN--KNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIYMCD 44
MNAIL K T+ ++Y + FPC +C K+I+Q+GIK++ Y+ D
Sbjct: 73 MNAILQCAKFGVPTEGAEIYVTHFPCLQCTKMILQAGIKKIYYLKD 118
>gi|39996786|ref|NP_952737.1| deoxycytidylate deaminase [Geobacter sulfurreducens PCA]
gi|409912205|ref|YP_006890670.1| deoxycytidylate deaminase [Geobacter sulfurreducens KN400]
gi|39983674|gb|AAR35064.1| deoxycytidylate deaminase [Geobacter sulfurreducens PCA]
gi|298505797|gb|ADI84520.1| deoxycytidylate deaminase [Geobacter sulfurreducens KN400]
Length = 154
Score = 75.1 bits (183), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 46/119 (38%), Positives = 62/119 (52%), Gaps = 12/119 (10%)
Query: 91 WHEYFMASAFLVAKRSKDPVTRVGAVIVNEDNKIVGTGYNGMP--------IGCSDDEFP 142
W EYFM LVAKRS +VGAVIV + N I+ TGYNG P +GC +
Sbjct: 6 WDEYFMEITHLVAKRSTCLRRQVGAVIVKDKN-ILATGYNGAPSGVAHCLDVGCLRERLG 64
Query: 143 WDKNTHDEL-DMCHAEMNAILN--KNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIY 198
EL HAE NAI+ K+ + LY + PC C+K++I +GI+ ++Y
Sbjct: 65 IPSGERHELCRGLHAEQNAIIQAAKHGTNIDGGTLYCTTMPCIICSKMLINAGIRRIVY 123
>gi|30022404|ref|NP_834035.1| ComE operon protein 2 [Bacillus cereus ATCC 14579]
gi|29897962|gb|AAP11236.1| ComE operon protein 2 [Bacillus cereus ATCC 14579]
Length = 182
Score = 75.1 bits (183), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 48/119 (40%), Positives = 64/119 (53%), Gaps = 10/119 (8%)
Query: 89 LEWHEYFMASAFLVAKRSKDPVTRVGAVIVNEDNKIVGTGYNGMPIG---CSDDE-FPWD 144
+ W +YFM + L++ RS VGA IV D +I+ GYNG G C DD + D
Sbjct: 4 ISWDQYFMTQSHLLSLRSTCTRLAVGATIVR-DKRIIAGGYNGSIKGGVHCIDDGCYVID 62
Query: 145 KNTHDELDMCHAEMNAILN--KNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIYMCD 201
+ + HAEMNA+L K A T+ ++Y + FPC +C K IIQSGI V Y D
Sbjct: 63 NHC---VRTIHAEMNALLQCAKFGAKTEEAEIYVTHFPCLQCCKAIIQSGITAVYYAQD 118
Score = 45.8 bits (107), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 28/66 (42%), Positives = 37/66 (56%), Gaps = 6/66 (9%)
Query: 1 MNAILN--KNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIYMCDKHKQKPATIASKRM 58
MNA+L K A T+ ++Y + FPC +C K IIQSGI V Y D +K P I +
Sbjct: 73 MNALLQCAKFGAKTEEAEIYVTHFPCLQCCKAIIQSGITAVYYAQD-YKNHPYAI---EL 128
Query: 59 FDAAKV 64
F+ A V
Sbjct: 129 FEQANV 134
>gi|256616995|ref|ZP_05473841.1| cytidine/deoxycytidylate deaminase [Enterococcus faecalis ATCC
4200]
gi|256596522|gb|EEU15698.1| cytidine/deoxycytidylate deaminase [Enterococcus faecalis ATCC
4200]
Length = 151
Score = 75.1 bits (183), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 45/117 (38%), Positives = 67/117 (57%), Gaps = 6/117 (5%)
Query: 89 LEWHEYFMASAFLVAKRSKDPVTRVGAVIVNEDNKIVGTGYNGMPIGCSD--DEFPWDKN 146
+ W +YFM + L++ RS VGA IV D +I+ GYNG G + DE + +
Sbjct: 4 IPWDQYFMGQSVLLSLRSTCTRLTVGATIV-RDKRIIAGGYNGSVSGGTHCIDEGCYVVD 62
Query: 147 THDELDMCHAEMNAILN--KNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIYMCD 201
H + HAEMNAIL K T+ ++Y + FPC +C K+I+Q+GIK++ Y+ D
Sbjct: 63 NHC-VRTIHAEMNAILQCAKFGVPTEGAEIYVTHFPCLQCTKMILQAGIKKIYYLKD 118
Score = 43.1 bits (100), Expect = 0.074, Method: Compositional matrix adjust.
Identities = 20/46 (43%), Positives = 31/46 (67%), Gaps = 2/46 (4%)
Query: 1 MNAILN--KNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIYMCD 44
MNAIL K T+ ++Y + FPC +C K+I+Q+GIK++ Y+ D
Sbjct: 73 MNAILQCAKFGVPTEGAEIYVTHFPCLQCTKMILQAGIKKIYYLKD 118
>gi|228910163|ref|ZP_04073982.1| ComE operon protein 2 [Bacillus thuringiensis IBL 200]
gi|228849446|gb|EEM94281.1| ComE operon protein 2 [Bacillus thuringiensis IBL 200]
Length = 188
Score = 75.1 bits (183), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 48/119 (40%), Positives = 64/119 (53%), Gaps = 10/119 (8%)
Query: 89 LEWHEYFMASAFLVAKRSKDPVTRVGAVIVNEDNKIVGTGYNGMPIG---CSDDE-FPWD 144
+ W +YFM + L++ RS VGA IV D +I+ GYNG G C DD + D
Sbjct: 7 ISWDQYFMTQSHLLSLRSTCTRLAVGATIVR-DKRIIAGGYNGSIKGGVHCIDDGCYVID 65
Query: 145 KNTHDELDMCHAEMNAILN--KNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIYMCD 201
+ + HAEMNA+L K A T+ ++Y + FPC +C K IIQSGI V Y D
Sbjct: 66 NHC---VRTIHAEMNALLQCAKFGAKTEEAEIYVTHFPCLQCCKAIIQSGITAVYYAQD 121
Score = 45.8 bits (107), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 28/66 (42%), Positives = 37/66 (56%), Gaps = 6/66 (9%)
Query: 1 MNAILN--KNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIYMCDKHKQKPATIASKRM 58
MNA+L K A T+ ++Y + FPC +C K IIQSGI V Y D +K P I +
Sbjct: 76 MNALLQCAKFGAKTEEAEIYVTHFPCLQCCKAIIQSGITAVYYAQD-YKNHPYAI---EL 131
Query: 59 FDAAKV 64
F+ A V
Sbjct: 132 FEQANV 137
>gi|222151486|ref|YP_002560642.1| late competence operon required for DNA binding and uptake ComEB
[Macrococcus caseolyticus JCSC5402]
gi|222120611|dbj|BAH17946.1| late competence operon required for DNA binding and uptake ComEB
[Macrococcus caseolyticus JCSC5402]
Length = 153
Score = 75.1 bits (183), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 47/119 (39%), Positives = 65/119 (54%), Gaps = 10/119 (8%)
Query: 89 LEWHEYFMASAFLVAKRSKDPVTRVGAVIVNEDNKIVGTGYNGMPIGCSDDEFPWDKNTH 148
++W EYFMA + L+A RS VGA IV ++N+I+ GYNG S + D +
Sbjct: 4 IQWKEYFMAQSQLLALRSTCTRLSVGATIV-KNNRIIAGGYNG---SVSGEVHCIDAGCY 59
Query: 149 DELDMC----HAEMNAILN--KNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIYMCD 201
E C HAEMNA+L K T+ +Y + FPC C K +IQ+GIK++ Y D
Sbjct: 60 VEGGHCIRTIHAEMNALLQCAKMGVTTEGADIYVTHFPCIHCTKSLIQAGIKKIYYAED 118
Score = 41.6 bits (96), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 28/82 (34%), Positives = 40/82 (48%), Gaps = 13/82 (15%)
Query: 1 MNAILN--KNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIYMCDKHKQKPATI--ASK 56
MNA+L K T+ +Y + FPC C K +IQ+GIK+ IY + +K P I K
Sbjct: 73 MNALLQCAKMGVTTEGADIYVTHFPCIHCTKSLIQAGIKK-IYYAEDYKNHPYAIELLDK 131
Query: 57 RMFDAAKV--------HYWSEM 70
D K+ HY+ +M
Sbjct: 132 NRIDTEKIDFNPQHVAHYFEQM 153
>gi|401684641|ref|ZP_10816517.1| putative ComE operon protein 2 [Streptococcus sp. BS35b]
gi|400184911|gb|EJO19147.1| putative ComE operon protein 2 [Streptococcus sp. BS35b]
Length = 155
Score = 75.1 bits (183), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 48/120 (40%), Positives = 63/120 (52%), Gaps = 7/120 (5%)
Query: 89 LEWHEYFMASAFLVAKRSKDPVTRVGAVIVNEDNKIVGTGYNGMPIG---CSDDEFPWDK 145
L W EYF A A L+A RS +VGAV+V +DNK++ TGYNG G C D E +
Sbjct: 6 LAWDEYFAAQALLIANRSTCKRAKVGAVLV-KDNKVISTGYNGSVSGTEHCIDHECLVIE 64
Query: 146 NTHDELDMCHAEMNAILNKNSADTKR-CKLYTSLFPCNECAKVIIQSGIKEVIYMCDKQM 204
+ HAE+NAIL R Y + FPC C K ++Q G K V+Y+ +M
Sbjct: 65 G--HCVRTLHAEVNAILQGAERGVPRGFTAYVTHFPCLNCTKQLLQVGCKRVVYINQYRM 122
>gi|293365055|ref|ZP_06611772.1| cytidine and deoxycytidylate deaminase [Streptococcus oralis ATCC
35037]
gi|307702235|ref|ZP_07639195.1| comE operon protein 2 [Streptococcus oralis ATCC 35037]
gi|406586951|ref|ZP_11061869.1| deoxycytidylate deaminase [Streptococcus sp. GMD1S]
gi|418974887|ref|ZP_13522796.1| putative ComE operon protein 2 [Streptococcus oralis SK1074]
gi|419781187|ref|ZP_14307019.1| putative ComE operon protein 2 [Streptococcus oralis SK100]
gi|419814738|ref|ZP_14339494.1| deoxycytidylate deaminase [Streptococcus sp. GMD2S]
gi|419817994|ref|ZP_14342115.1| deoxycytidylate deaminase [Streptococcus sp. GMD4S]
gi|291316505|gb|EFE56941.1| cytidine and deoxycytidylate deaminase [Streptococcus oralis ATCC
35037]
gi|307624248|gb|EFO03225.1| comE operon protein 2 [Streptococcus oralis ATCC 35037]
gi|383184579|gb|EIC77093.1| putative ComE operon protein 2 [Streptococcus oralis SK100]
gi|383348258|gb|EID26217.1| putative ComE operon protein 2 [Streptococcus oralis SK1074]
gi|404465198|gb|EKA10684.1| deoxycytidylate deaminase [Streptococcus sp. GMD4S]
gi|404471224|gb|EKA15775.1| deoxycytidylate deaminase [Streptococcus sp. GMD2S]
gi|404473582|gb|EKA17915.1| deoxycytidylate deaminase [Streptococcus sp. GMD1S]
Length = 155
Score = 75.1 bits (183), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 48/120 (40%), Positives = 63/120 (52%), Gaps = 7/120 (5%)
Query: 89 LEWHEYFMASAFLVAKRSKDPVTRVGAVIVNEDNKIVGTGYNGMPIG---CSDDEFPWDK 145
L W EYF A A L+A RS +VGAV+V +DNK++ TGYNG G C D E +
Sbjct: 6 LAWDEYFAAQALLIANRSTCKRAKVGAVLV-KDNKVISTGYNGSVSGTEHCIDHECLVIE 64
Query: 146 NTHDELDMCHAEMNAILNKNSADTKR-CKLYTSLFPCNECAKVIIQSGIKEVIYMCDKQM 204
+ HAE+NAIL R Y + FPC C K ++Q G K V+Y+ +M
Sbjct: 65 G--HCVRTLHAEVNAILQGAERGVPRGFTAYVTHFPCLNCTKQLLQVGCKRVVYINQYRM 122
>gi|417793529|ref|ZP_12440804.1| putative ComE operon protein 2 [Streptococcus oralis SK255]
gi|421487676|ref|ZP_15935074.1| putative ComE operon protein 2 [Streptococcus oralis SK304]
gi|334272814|gb|EGL91171.1| putative ComE operon protein 2 [Streptococcus oralis SK255]
gi|400369638|gb|EJP22635.1| putative ComE operon protein 2 [Streptococcus oralis SK304]
Length = 155
Score = 74.7 bits (182), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 48/120 (40%), Positives = 63/120 (52%), Gaps = 7/120 (5%)
Query: 89 LEWHEYFMASAFLVAKRSKDPVTRVGAVIVNEDNKIVGTGYNGMPIG---CSDDEFPWDK 145
L W EYF A A L+A RS +VGAV+V +DNK++ TGYNG G C D E +
Sbjct: 6 LAWDEYFAAQALLIANRSTCKRAKVGAVLV-KDNKVISTGYNGSVSGTEHCIDHECLVIE 64
Query: 146 NTHDELDMCHAEMNAILNKNSADTKR-CKLYTSLFPCNECAKVIIQSGIKEVIYMCDKQM 204
+ HAE+NAIL R Y + FPC C K ++Q G K V+Y+ +M
Sbjct: 65 G--HCVRTLHAEVNAILQGAERGVPRGFTAYVTHFPCLNCTKQLLQVGCKRVVYINQYRM 122
>gi|206969676|ref|ZP_03230630.1| ComE operon protein 2 [Bacillus cereus AH1134]
gi|218899494|ref|YP_002447905.1| ComE operon protein 2 [Bacillus cereus G9842]
gi|365158884|ref|ZP_09355074.1| ComE operon protein 2 [Bacillus sp. 7_6_55CFAA_CT2]
gi|423358637|ref|ZP_17336140.1| ComE operon protein 2 [Bacillus cereus VD022]
gi|423385828|ref|ZP_17363084.1| ComE operon protein 2 [Bacillus cereus BAG1X1-2]
gi|423411877|ref|ZP_17388997.1| ComE operon protein 2 [Bacillus cereus BAG3O-2]
gi|423426459|ref|ZP_17403490.1| ComE operon protein 2 [Bacillus cereus BAG3X2-2]
gi|423432337|ref|ZP_17409341.1| ComE operon protein 2 [Bacillus cereus BAG4O-1]
gi|423437772|ref|ZP_17414753.1| ComE operon protein 2 [Bacillus cereus BAG4X12-1]
gi|423502988|ref|ZP_17479580.1| ComE operon protein 2 [Bacillus cereus HD73]
gi|423527815|ref|ZP_17504260.1| ComE operon protein 2 [Bacillus cereus HuB1-1]
gi|423615332|ref|ZP_17591166.1| ComE operon protein 2 [Bacillus cereus VD115]
gi|434377494|ref|YP_006612138.1| ComE operon protein 2 [Bacillus thuringiensis HD-789]
gi|449091290|ref|YP_007423731.1| ComE operon protein 2 [Bacillus thuringiensis serovar kurstaki str.
HD73]
gi|206735364|gb|EDZ52532.1| ComE operon protein 2 [Bacillus cereus AH1134]
gi|218543217|gb|ACK95611.1| ComE operon protein 2 [Bacillus cereus G9842]
gi|363626254|gb|EHL77251.1| ComE operon protein 2 [Bacillus sp. 7_6_55CFAA_CT2]
gi|401084509|gb|EJP92755.1| ComE operon protein 2 [Bacillus cereus VD022]
gi|401103945|gb|EJQ11922.1| ComE operon protein 2 [Bacillus cereus BAG3O-2]
gi|401111206|gb|EJQ19105.1| ComE operon protein 2 [Bacillus cereus BAG3X2-2]
gi|401117093|gb|EJQ24931.1| ComE operon protein 2 [Bacillus cereus BAG4O-1]
gi|401120927|gb|EJQ28723.1| ComE operon protein 2 [Bacillus cereus BAG4X12-1]
gi|401261011|gb|EJR67178.1| ComE operon protein 2 [Bacillus cereus VD115]
gi|401635884|gb|EJS53639.1| ComE operon protein 2 [Bacillus cereus BAG1X1-2]
gi|401876051|gb|AFQ28218.1| ComE operon protein 2 [Bacillus thuringiensis HD-789]
gi|402451478|gb|EJV83297.1| ComE operon protein 2 [Bacillus cereus HuB1-1]
gi|402459209|gb|EJV90946.1| ComE operon protein 2 [Bacillus cereus HD73]
gi|449025047|gb|AGE80210.1| ComE operon protein 2 [Bacillus thuringiensis serovar kurstaki str.
HD73]
Length = 185
Score = 74.7 bits (182), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 48/119 (40%), Positives = 64/119 (53%), Gaps = 10/119 (8%)
Query: 89 LEWHEYFMASAFLVAKRSKDPVTRVGAVIVNEDNKIVGTGYNGMPIG---CSDDE-FPWD 144
+ W +YFM + L++ RS VGA IV D +I+ GYNG G C DD + D
Sbjct: 4 ISWDQYFMTQSHLLSLRSTCTRLAVGATIVR-DKRIIAGGYNGSIKGGVHCIDDGCYVID 62
Query: 145 KNTHDELDMCHAEMNAILN--KNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIYMCD 201
+ + HAEMNA+L K A T+ ++Y + FPC +C K IIQSGI V Y D
Sbjct: 63 NHC---VRTIHAEMNALLQCAKFGAKTEEAEIYVTHFPCLQCCKAIIQSGITAVYYAQD 118
Score = 45.8 bits (107), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 28/66 (42%), Positives = 37/66 (56%), Gaps = 6/66 (9%)
Query: 1 MNAILN--KNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIYMCDKHKQKPATIASKRM 58
MNA+L K A T+ ++Y + FPC +C K IIQSGI V Y D +K P I +
Sbjct: 73 MNALLQCAKFGAKTEEAEIYVTHFPCLQCCKAIIQSGITAVYYAQD-YKNHPYAI---EL 128
Query: 59 FDAAKV 64
F+ A V
Sbjct: 129 FEQANV 134
>gi|347753142|ref|YP_004860707.1| ComE operon protein 2 [Bacillus coagulans 36D1]
gi|347585660|gb|AEP01927.1| ComE operon protein 2 [Bacillus coagulans 36D1]
Length = 200
Score = 74.7 bits (182), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 49/124 (39%), Positives = 65/124 (52%), Gaps = 10/124 (8%)
Query: 87 DVLEWHEYFMASAFLVAKRSKDPVTRVGAVIVNEDNKIVGTGYNGMPIGCSDDEFPWDKN 146
D + W++YF+A + L++ RS VGA IV D +I+ GYNG G DE DK
Sbjct: 2 DRISWNQYFLAQSHLLSWRSTCSRLAVGATIVR-DKRIIAGGYNGSIAG---DEHCIDKG 57
Query: 147 THDELDMC----HAEMNAILN--KNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIYMC 200
+ C HAEMNAIL K T LY + +PC C K IIQ+GI+ V Y
Sbjct: 58 CYVIDGHCVRTIHAEMNAILQCAKFGVATNGADLYVTHYPCLHCTKAIIQAGIQNVYYAQ 117
Query: 201 DKQM 204
D ++
Sbjct: 118 DYRV 121
Score = 43.9 bits (102), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 27/67 (40%), Positives = 36/67 (53%), Gaps = 6/67 (8%)
Query: 1 MNAILN--KNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIYMCDKHKQKPATIASKRM 58
MNAIL K T LY + +PC C K IIQ+GI+ V Y D ++ P +K +
Sbjct: 73 MNAILQCAKFGVATNGADLYVTHYPCLHCTKAIIQAGIQNVYYAQD-YRVHP---YAKEL 128
Query: 59 FDAAKVH 65
F+ A VH
Sbjct: 129 FEKAGVH 135
>gi|384188400|ref|YP_005574296.1| ComE operon protein 2 [Bacillus thuringiensis serovar chinensis
CT-43]
gi|410676715|ref|YP_006929086.1| ComE operon protein 2 [Bacillus thuringiensis Bt407]
gi|452200792|ref|YP_007480873.1| dCMP deaminase; Late competence protein ComEB [Bacillus
thuringiensis serovar thuringiensis str. IS5056]
gi|326942109|gb|AEA18005.1| ComE operon protein 2 [Bacillus thuringiensis serovar chinensis
CT-43]
gi|409175844|gb|AFV20149.1| ComE operon protein 2 [Bacillus thuringiensis Bt407]
gi|452106185|gb|AGG03125.1| dCMP deaminase; Late competence protein ComEB [Bacillus
thuringiensis serovar thuringiensis str. IS5056]
Length = 185
Score = 74.7 bits (182), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 48/119 (40%), Positives = 64/119 (53%), Gaps = 10/119 (8%)
Query: 89 LEWHEYFMASAFLVAKRSKDPVTRVGAVIVNEDNKIVGTGYNGMPIG---CSDDE-FPWD 144
+ W +YFM + L++ RS VGA IV D +I+ GYNG G C DD + D
Sbjct: 4 ISWDQYFMTQSHLLSLRSTCTRLAVGATIVR-DKRIIAGGYNGSIKGGVHCIDDGCYVID 62
Query: 145 KNTHDELDMCHAEMNAILN--KNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIYMCD 201
+ + HAEMNA+L K A T+ ++Y + FPC +C K IIQSGI V Y D
Sbjct: 63 NHC---VRTIHAEMNALLQCAKFGAKTEEAEIYVTHFPCLQCCKAIIQSGITAVYYAQD 118
Score = 45.8 bits (107), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 28/66 (42%), Positives = 37/66 (56%), Gaps = 6/66 (9%)
Query: 1 MNAILN--KNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIYMCDKHKQKPATIASKRM 58
MNA+L K A T+ ++Y + FPC +C K IIQSGI V Y D +K P I +
Sbjct: 73 MNALLQCAKFGAKTEEAEIYVTHFPCLQCCKAIIQSGITAVYYAQD-YKNHPYAI---EL 128
Query: 59 FDAAKV 64
F+ A V
Sbjct: 129 FEQANV 134
>gi|423448908|ref|ZP_17425787.1| ComE operon protein 2 [Bacillus cereus BAG5O-1]
gi|423541393|ref|ZP_17517784.1| ComE operon protein 2 [Bacillus cereus HuB4-10]
gi|423622586|ref|ZP_17598364.1| ComE operon protein 2 [Bacillus cereus VD148]
gi|401129502|gb|EJQ37185.1| ComE operon protein 2 [Bacillus cereus BAG5O-1]
gi|401172581|gb|EJQ79802.1| ComE operon protein 2 [Bacillus cereus HuB4-10]
gi|401260706|gb|EJR66874.1| ComE operon protein 2 [Bacillus cereus VD148]
Length = 185
Score = 74.7 bits (182), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 48/119 (40%), Positives = 64/119 (53%), Gaps = 10/119 (8%)
Query: 89 LEWHEYFMASAFLVAKRSKDPVTRVGAVIVNEDNKIVGTGYNGMPIG---CSDDE-FPWD 144
+ W +YFM + L++ RS VGA IV D +I+ GYNG G C DD + D
Sbjct: 4 ISWDQYFMTQSHLLSLRSTCTRLAVGATIVR-DKRIIAGGYNGSIKGGVHCIDDGCYVID 62
Query: 145 KNTHDELDMCHAEMNAILN--KNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIYMCD 201
+ + HAEMNA+L K A T+ ++Y + FPC +C K IIQSGI V Y D
Sbjct: 63 NHC---VRTIHAEMNALLQCAKFGAKTEEAEIYVTHFPCLQCCKAIIQSGITAVYYAQD 118
Score = 45.8 bits (107), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 28/66 (42%), Positives = 37/66 (56%), Gaps = 6/66 (9%)
Query: 1 MNAILN--KNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIYMCDKHKQKPATIASKRM 58
MNA+L K A T+ ++Y + FPC +C K IIQSGI V Y D +K P I +
Sbjct: 73 MNALLQCAKFGAKTEEAEIYVTHFPCLQCCKAIIQSGITAVYYAQD-YKNHPYAI---EL 128
Query: 59 FDAAKV 64
F+ A V
Sbjct: 129 FEQANV 134
>gi|406577000|ref|ZP_11052621.1| dCMP deaminase [Streptococcus sp. GMD6S]
gi|404460464|gb|EKA06727.1| dCMP deaminase [Streptococcus sp. GMD6S]
Length = 155
Score = 74.7 bits (182), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 48/120 (40%), Positives = 63/120 (52%), Gaps = 7/120 (5%)
Query: 89 LEWHEYFMASAFLVAKRSKDPVTRVGAVIVNEDNKIVGTGYNGMPIG---CSDDEFPWDK 145
L W EYF A A L+A RS +VGAV+V +DNK++ TGYNG G C D E +
Sbjct: 6 LAWDEYFAAQALLIANRSTCKRAKVGAVLV-KDNKVISTGYNGSVSGTEHCIDHECLVIE 64
Query: 146 NTHDELDMCHAEMNAILNKNSADTKR-CKLYTSLFPCNECAKVIIQSGIKEVIYMCDKQM 204
+ HAE+NAIL R Y + FPC C K ++Q G K V+Y+ +M
Sbjct: 65 G--HCVRTLHAEVNAILQGAERGVPRGFTAYVTHFPCLNCTKQLLQVGCKRVVYINQYRM 122
>gi|322385723|ref|ZP_08059367.1| competence protein comEB [Streptococcus cristatus ATCC 51100]
gi|417922778|ref|ZP_12566264.1| putative ComE operon protein 2 [Streptococcus cristatus ATCC 51100]
gi|321270461|gb|EFX53377.1| competence protein comEB [Streptococcus cristatus ATCC 51100]
gi|342831926|gb|EGU66229.1| putative ComE operon protein 2 [Streptococcus cristatus ATCC 51100]
Length = 156
Score = 74.7 bits (182), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 49/116 (42%), Positives = 62/116 (53%), Gaps = 9/116 (7%)
Query: 89 LEWHEYFMASAFLVAKRSKDPVTRVGAVIVNEDNKIVGTGYNGMPIG---CSDDE-FPWD 144
L W EYF A A L+A RS +VGAV+V +DNK++ TGYNG G C D E D
Sbjct: 7 LAWDEYFAAQALLIANRSTCKRAKVGAVLV-KDNKVISTGYNGSVSGTEHCIDHECLVID 65
Query: 145 KNTHDELDMCHAEMNAILNKNSADT-KRCKLYTSLFPCNECAKVIIQSGIKEVIYM 199
+ L HAE+NAIL K Y + FPC C K ++Q G K V+Y+
Sbjct: 66 GHCVRTL---HAEVNAILQGAERGVPKGFTAYVTHFPCLNCTKQLLQVGCKRVVYI 118
>gi|423377816|ref|ZP_17355100.1| ComE operon protein 2 [Bacillus cereus BAG1O-2]
gi|423547629|ref|ZP_17523987.1| ComE operon protein 2 [Bacillus cereus HuB5-5]
gi|401179350|gb|EJQ86523.1| ComE operon protein 2 [Bacillus cereus HuB5-5]
gi|401636082|gb|EJS53836.1| ComE operon protein 2 [Bacillus cereus BAG1O-2]
Length = 185
Score = 74.7 bits (182), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 48/119 (40%), Positives = 64/119 (53%), Gaps = 10/119 (8%)
Query: 89 LEWHEYFMASAFLVAKRSKDPVTRVGAVIVNEDNKIVGTGYNGMPIG---CSDDE-FPWD 144
+ W +YFM + L++ RS VGA IV D +I+ GYNG G C DD + D
Sbjct: 4 ISWDQYFMTQSHLLSLRSTCTRLAVGATIVR-DKRIIAGGYNGSIKGGVHCIDDGCYVID 62
Query: 145 KNTHDELDMCHAEMNAILN--KNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIYMCD 201
+ + HAEMNA+L K A T+ ++Y + FPC +C K IIQSGI V Y D
Sbjct: 63 NHC---VRTIHAEMNALLQCAKFGAKTEEAEIYVTHFPCLQCCKAIIQSGITAVYYAQD 118
Score = 45.8 bits (107), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 28/66 (42%), Positives = 37/66 (56%), Gaps = 6/66 (9%)
Query: 1 MNAILN--KNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIYMCDKHKQKPATIASKRM 58
MNA+L K A T+ ++Y + FPC +C K IIQSGI V Y D +K P I +
Sbjct: 73 MNALLQCAKFGAKTEEAEIYVTHFPCLQCCKAIIQSGITAVYYAQD-YKNHPYAI---EL 128
Query: 59 FDAAKV 64
F+ A V
Sbjct: 129 FEQANV 134
>gi|228902852|ref|ZP_04066995.1| ComE operon protein 2 [Bacillus thuringiensis IBL 4222]
gi|228954613|ref|ZP_04116637.1| ComE operon protein 2 [Bacillus thuringiensis serovar kurstaki str.
T03a001]
gi|229071833|ref|ZP_04205046.1| ComE operon protein 2 [Bacillus cereus F65185]
gi|229081590|ref|ZP_04214086.1| ComE operon protein 2 [Bacillus cereus Rock4-2]
gi|229180604|ref|ZP_04307945.1| ComE operon protein 2 [Bacillus cereus 172560W]
gi|229192539|ref|ZP_04319500.1| ComE operon protein 2 [Bacillus cereus ATCC 10876]
gi|228590846|gb|EEK48704.1| ComE operon protein 2 [Bacillus cereus ATCC 10876]
gi|228602847|gb|EEK60327.1| ComE operon protein 2 [Bacillus cereus 172560W]
gi|228701696|gb|EEL54186.1| ComE operon protein 2 [Bacillus cereus Rock4-2]
gi|228711263|gb|EEL63225.1| ComE operon protein 2 [Bacillus cereus F65185]
gi|228805059|gb|EEM51654.1| ComE operon protein 2 [Bacillus thuringiensis serovar kurstaki str.
T03a001]
gi|228856776|gb|EEN01293.1| ComE operon protein 2 [Bacillus thuringiensis IBL 4222]
Length = 188
Score = 74.7 bits (182), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 48/119 (40%), Positives = 64/119 (53%), Gaps = 10/119 (8%)
Query: 89 LEWHEYFMASAFLVAKRSKDPVTRVGAVIVNEDNKIVGTGYNGMPIG---CSDDE-FPWD 144
+ W +YFM + L++ RS VGA IV D +I+ GYNG G C DD + D
Sbjct: 7 ISWDQYFMTQSHLLSLRSTCTRLAVGATIVR-DKRIIAGGYNGSIKGGVHCIDDGCYVID 65
Query: 145 KNTHDELDMCHAEMNAILN--KNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIYMCD 201
+ + HAEMNA+L K A T+ ++Y + FPC +C K IIQSGI V Y D
Sbjct: 66 NHC---VRTIHAEMNALLQCAKFGAKTEEAEIYVTHFPCLQCCKAIIQSGITAVYYAQD 121
Score = 45.8 bits (107), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 28/66 (42%), Positives = 37/66 (56%), Gaps = 6/66 (9%)
Query: 1 MNAILN--KNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIYMCDKHKQKPATIASKRM 58
MNA+L K A T+ ++Y + FPC +C K IIQSGI V Y D +K P I +
Sbjct: 76 MNALLQCAKFGAKTEEAEIYVTHFPCLQCCKAIIQSGITAVYYAQD-YKNHPYAI---EL 131
Query: 59 FDAAKV 64
F+ A V
Sbjct: 132 FEQANV 137
>gi|29376942|ref|NP_816096.1| comE operon protein 2 [Enterococcus faecalis V583]
gi|227519834|ref|ZP_03949883.1| competence protein ComEB [Enterococcus faecalis TX0104]
gi|227553981|ref|ZP_03984028.1| competence protein ComEB [Enterococcus faecalis HH22]
gi|229545131|ref|ZP_04433856.1| competence protein ComEB [Enterococcus faecalis TX1322]
gi|229549379|ref|ZP_04438104.1| competence protein ComEB [Enterococcus faecalis ATCC 29200]
gi|255972085|ref|ZP_05422671.1| cytidine/deoxycytidylate deaminase [Enterococcus faecalis T1]
gi|255975152|ref|ZP_05425738.1| cytidine/deoxycytidylate deaminase [Enterococcus faecalis T2]
gi|256763140|ref|ZP_05503720.1| cytidine/deoxycytidylate deaminase [Enterococcus faecalis T3]
gi|256853808|ref|ZP_05559173.1| late competence protein ComEB [Enterococcus faecalis T8]
gi|256956725|ref|ZP_05560896.1| cytidine/deoxycytidylate deaminase [Enterococcus faecalis DS5]
gi|256961258|ref|ZP_05565429.1| cytidine/deoxycytidylate deaminase [Enterococcus faecalis Merz96]
gi|256963615|ref|ZP_05567786.1| cytidine/deoxycytidylate deaminase [Enterococcus faecalis HIP11704]
gi|257079679|ref|ZP_05574040.1| cytidine/deoxycytidylate deaminase [Enterococcus faecalis JH1]
gi|257081974|ref|ZP_05576335.1| cytidine/deoxycytidylate deaminase [Enterococcus faecalis E1Sol]
gi|257084526|ref|ZP_05578887.1| cytidine/deoxycytidylate deaminase [Enterococcus faecalis Fly1]
gi|257090637|ref|ZP_05584998.1| cytidine/deoxycytidylate deaminase [Enterococcus faecalis CH188]
gi|257416685|ref|ZP_05593679.1| cytidine/deoxycytidylate deaminase [Enterococcus faecalis ARO1/DG]
gi|257419901|ref|ZP_05596895.1| cytidine/deoxycytidylate deaminase [Enterococcus faecalis T11]
gi|257421911|ref|ZP_05598901.1| cytidine/deoxycytidylate deaminase [Enterococcus faecalis X98]
gi|293383542|ref|ZP_06629452.1| ComE operon protein 2 [Enterococcus faecalis R712]
gi|293387345|ref|ZP_06631901.1| ComE operon protein 2 [Enterococcus faecalis S613]
gi|294780837|ref|ZP_06746192.1| ComE operon protein 2 [Enterococcus faecalis PC1.1]
gi|300860396|ref|ZP_07106483.1| ComE operon protein 2 [Enterococcus faecalis TUSoD Ef11]
gi|307270792|ref|ZP_07552082.1| ComE operon protein 2 [Enterococcus faecalis TX4248]
gi|307271556|ref|ZP_07552828.1| ComE operon protein 2 [Enterococcus faecalis TX0855]
gi|307285769|ref|ZP_07565903.1| ComE operon protein 2 [Enterococcus faecalis TX0860]
gi|307287672|ref|ZP_07567715.1| ComE operon protein 2 [Enterococcus faecalis TX0109]
gi|307290498|ref|ZP_07570411.1| ComE operon protein 2 [Enterococcus faecalis TX0411]
gi|312899878|ref|ZP_07759196.1| ComE operon protein 2 [Enterococcus faecalis TX0470]
gi|312905172|ref|ZP_07764293.1| ComE operon protein 2 [Enterococcus faecalis TX0635]
gi|312906092|ref|ZP_07765104.1| ComE operon protein 2 [Enterococcus faecalis DAPTO 512]
gi|312909438|ref|ZP_07768293.1| ComE operon protein 2 [Enterococcus faecalis DAPTO 516]
gi|312953529|ref|ZP_07772367.1| ComE operon protein 2 [Enterococcus faecalis TX0102]
gi|384513843|ref|YP_005708936.1| ComE operon protein 2 [Enterococcus faecalis OG1RF]
gi|384519304|ref|YP_005706609.1| comE operon protein 2 [Enterococcus faecalis 62]
gi|397700636|ref|YP_006538424.1| comE operon protein 2 [Enterococcus faecalis D32]
gi|422685067|ref|ZP_16743292.1| ComE operon protein 2 [Enterococcus faecalis TX4000]
gi|422687851|ref|ZP_16746022.1| ComE operon protein 2 [Enterococcus faecalis TX0630]
gi|422693284|ref|ZP_16751298.1| ComE operon protein 2 [Enterococcus faecalis TX0031]
gi|422695955|ref|ZP_16753933.1| ComE operon protein 2 [Enterococcus faecalis TX4244]
gi|422701312|ref|ZP_16759153.1| ComE operon protein 2 [Enterococcus faecalis TX1342]
gi|422703650|ref|ZP_16761470.1| ComE operon protein 2 [Enterococcus faecalis TX1302]
gi|422707024|ref|ZP_16764721.1| ComE operon protein 2 [Enterococcus faecalis TX0043]
gi|422709850|ref|ZP_16767196.1| ComE operon protein 2 [Enterococcus faecalis TX0027]
gi|422714992|ref|ZP_16771716.1| ComE operon protein 2 [Enterococcus faecalis TX0309A]
gi|422717330|ref|ZP_16774015.1| ComE operon protein 2 [Enterococcus faecalis TX0309B]
gi|422719903|ref|ZP_16776526.1| ComE operon protein 2 [Enterococcus faecalis TX0017]
gi|422725922|ref|ZP_16782379.1| ComE operon protein 2 [Enterococcus faecalis TX0312]
gi|422729512|ref|ZP_16785913.1| ComE operon protein 2 [Enterococcus faecalis TX0012]
gi|422732273|ref|ZP_16788613.1| ComE operon protein 2 [Enterococcus faecalis TX0645]
gi|422736748|ref|ZP_16793010.1| ComE operon protein 2 [Enterococcus faecalis TX1341]
gi|422739332|ref|ZP_16794513.1| ComE operon protein 2 [Enterococcus faecalis TX2141]
gi|422869023|ref|ZP_16915545.1| ComE operon protein 2 [Enterococcus faecalis TX1467]
gi|424676191|ref|ZP_18113068.1| ComE operon protein 2 [Enterococcus faecalis ERV103]
gi|424680636|ref|ZP_18117439.1| ComE operon protein 2 [Enterococcus faecalis ERV116]
gi|424683074|ref|ZP_18119828.1| ComE operon protein 2 [Enterococcus faecalis ERV129]
gi|424686720|ref|ZP_18123386.1| ComE operon protein 2 [Enterococcus faecalis ERV25]
gi|424689515|ref|ZP_18126086.1| ComE operon protein 2 [Enterococcus faecalis ERV31]
gi|424694125|ref|ZP_18130534.1| ComE operon protein 2 [Enterococcus faecalis ERV37]
gi|424697704|ref|ZP_18134026.1| ComE operon protein 2 [Enterococcus faecalis ERV41]
gi|424700201|ref|ZP_18136399.1| ComE operon protein 2 [Enterococcus faecalis ERV62]
gi|424702957|ref|ZP_18139094.1| ComE operon protein 2 [Enterococcus faecalis ERV63]
gi|424710216|ref|ZP_18143682.1| ComE operon protein 2 [Enterococcus faecalis ERV65]
gi|424717825|ref|ZP_18147099.1| ComE operon protein 2 [Enterococcus faecalis ERV68]
gi|424721049|ref|ZP_18150147.1| ComE operon protein 2 [Enterococcus faecalis ERV72]
gi|424725094|ref|ZP_18154021.1| ComE operon protein 2 [Enterococcus faecalis ERV73]
gi|424727329|ref|ZP_18155962.1| ComE operon protein 2 [Enterococcus faecalis ERV81]
gi|424742119|ref|ZP_18170453.1| ComE operon protein 2 [Enterococcus faecalis ERV85]
gi|424751250|ref|ZP_18179282.1| ComE operon protein 2 [Enterococcus faecalis ERV93]
gi|428767654|ref|YP_007153765.1| ComE operon protein 2 [Enterococcus faecalis str. Symbioflor 1]
gi|430357944|ref|ZP_19425182.1| comE operon protein 2, putative [Enterococcus faecalis OG1X]
gi|430370181|ref|ZP_19428924.1| comE operon protein 2, putative [Enterococcus faecalis M7]
gi|29344407|gb|AAO82166.1| comE operon protein 2, putative [Enterococcus faecalis V583]
gi|227072724|gb|EEI10687.1| competence protein ComEB [Enterococcus faecalis TX0104]
gi|227176884|gb|EEI57856.1| competence protein ComEB [Enterococcus faecalis HH22]
gi|229305616|gb|EEN71612.1| competence protein ComEB [Enterococcus faecalis ATCC 29200]
gi|229309676|gb|EEN75663.1| competence protein ComEB [Enterococcus faecalis TX1322]
gi|255963103|gb|EET95579.1| cytidine/deoxycytidylate deaminase [Enterococcus faecalis T1]
gi|255968024|gb|EET98646.1| cytidine/deoxycytidylate deaminase [Enterococcus faecalis T2]
gi|256684391|gb|EEU24086.1| cytidine/deoxycytidylate deaminase [Enterococcus faecalis T3]
gi|256710751|gb|EEU25794.1| late competence protein ComEB [Enterococcus faecalis T8]
gi|256947221|gb|EEU63853.1| cytidine/deoxycytidylate deaminase [Enterococcus faecalis DS5]
gi|256951754|gb|EEU68386.1| cytidine/deoxycytidylate deaminase [Enterococcus faecalis Merz96]
gi|256954111|gb|EEU70743.1| cytidine/deoxycytidylate deaminase [Enterococcus faecalis HIP11704]
gi|256987709|gb|EEU75011.1| cytidine/deoxycytidylate deaminase [Enterococcus faecalis JH1]
gi|256990004|gb|EEU77306.1| cytidine/deoxycytidylate deaminase [Enterococcus faecalis E1Sol]
gi|256992556|gb|EEU79858.1| cytidine/deoxycytidylate deaminase [Enterococcus faecalis Fly1]
gi|256999449|gb|EEU85969.1| cytidine/deoxycytidylate deaminase [Enterococcus faecalis CH188]
gi|257158513|gb|EEU88473.1| cytidine/deoxycytidylate deaminase [Enterococcus faecalis ARO1/DG]
gi|257161729|gb|EEU91689.1| cytidine/deoxycytidylate deaminase [Enterococcus faecalis T11]
gi|257163735|gb|EEU93695.1| cytidine/deoxycytidylate deaminase [Enterococcus faecalis X98]
gi|291079054|gb|EFE16418.1| ComE operon protein 2 [Enterococcus faecalis R712]
gi|291083243|gb|EFE20206.1| ComE operon protein 2 [Enterococcus faecalis S613]
gi|294452082|gb|EFG20529.1| ComE operon protein 2 [Enterococcus faecalis PC1.1]
gi|295113494|emb|CBL32131.1| ComE operon protein 2 [Enterococcus sp. 7L76]
gi|300849435|gb|EFK77185.1| ComE operon protein 2 [Enterococcus faecalis TUSoD Ef11]
gi|306498445|gb|EFM67949.1| ComE operon protein 2 [Enterococcus faecalis TX0411]
gi|306501410|gb|EFM70713.1| ComE operon protein 2 [Enterococcus faecalis TX0109]
gi|306502530|gb|EFM71797.1| ComE operon protein 2 [Enterococcus faecalis TX0860]
gi|306511828|gb|EFM80826.1| ComE operon protein 2 [Enterococcus faecalis TX0855]
gi|306512906|gb|EFM81548.1| ComE operon protein 2 [Enterococcus faecalis TX4248]
gi|310627738|gb|EFQ11021.1| ComE operon protein 2 [Enterococcus faecalis DAPTO 512]
gi|310628541|gb|EFQ11824.1| ComE operon protein 2 [Enterococcus faecalis TX0102]
gi|310631562|gb|EFQ14845.1| ComE operon protein 2 [Enterococcus faecalis TX0635]
gi|311290111|gb|EFQ68667.1| ComE operon protein 2 [Enterococcus faecalis DAPTO 516]
gi|311292874|gb|EFQ71430.1| ComE operon protein 2 [Enterococcus faecalis TX0470]
gi|315030173|gb|EFT42105.1| ComE operon protein 2 [Enterococcus faecalis TX4000]
gi|315032942|gb|EFT44874.1| ComE operon protein 2 [Enterococcus faecalis TX0017]
gi|315035754|gb|EFT47686.1| ComE operon protein 2 [Enterococcus faecalis TX0027]
gi|315144858|gb|EFT88874.1| ComE operon protein 2 [Enterococcus faecalis TX2141]
gi|315146725|gb|EFT90741.1| ComE operon protein 2 [Enterococcus faecalis TX4244]
gi|315150113|gb|EFT94129.1| ComE operon protein 2 [Enterococcus faecalis TX0012]
gi|315152019|gb|EFT96035.1| ComE operon protein 2 [Enterococcus faecalis TX0031]
gi|315155382|gb|EFT99398.1| ComE operon protein 2 [Enterococcus faecalis TX0043]
gi|315159042|gb|EFU03059.1| ComE operon protein 2 [Enterococcus faecalis TX0312]
gi|315161635|gb|EFU05652.1| ComE operon protein 2 [Enterococcus faecalis TX0645]
gi|315164895|gb|EFU08912.1| ComE operon protein 2 [Enterococcus faecalis TX1302]
gi|315166356|gb|EFU10373.1| ComE operon protein 2 [Enterococcus faecalis TX1341]
gi|315170253|gb|EFU14270.1| ComE operon protein 2 [Enterococcus faecalis TX1342]
gi|315574319|gb|EFU86510.1| ComE operon protein 2 [Enterococcus faecalis TX0309B]
gi|315579112|gb|EFU91303.1| ComE operon protein 2 [Enterococcus faecalis TX0630]
gi|315580206|gb|EFU92397.1| ComE operon protein 2 [Enterococcus faecalis TX0309A]
gi|323481437|gb|ADX80876.1| comE operon protein 2 [Enterococcus faecalis 62]
gi|327535732|gb|AEA94566.1| ComE operon protein 2 [Enterococcus faecalis OG1RF]
gi|329572337|gb|EGG53994.1| ComE operon protein 2 [Enterococcus faecalis TX1467]
gi|397337275|gb|AFO44947.1| comE operon protein 2 [Enterococcus faecalis D32]
gi|402353934|gb|EJU88756.1| ComE operon protein 2 [Enterococcus faecalis ERV116]
gi|402357703|gb|EJU92406.1| ComE operon protein 2 [Enterococcus faecalis ERV103]
gi|402365840|gb|EJV00254.1| ComE operon protein 2 [Enterococcus faecalis ERV129]
gi|402366926|gb|EJV01282.1| ComE operon protein 2 [Enterococcus faecalis ERV25]
gi|402367600|gb|EJV01939.1| ComE operon protein 2 [Enterococcus faecalis ERV31]
gi|402371907|gb|EJV06051.1| ComE operon protein 2 [Enterococcus faecalis ERV37]
gi|402374577|gb|EJV08593.1| ComE operon protein 2 [Enterococcus faecalis ERV62]
gi|402375235|gb|EJV09227.1| ComE operon protein 2 [Enterococcus faecalis ERV41]
gi|402383565|gb|EJV17160.1| ComE operon protein 2 [Enterococcus faecalis ERV68]
gi|402383928|gb|EJV17507.1| ComE operon protein 2 [Enterococcus faecalis ERV65]
gi|402385833|gb|EJV19360.1| ComE operon protein 2 [Enterococcus faecalis ERV63]
gi|402392369|gb|EJV25632.1| ComE operon protein 2 [Enterococcus faecalis ERV73]
gi|402392488|gb|EJV25747.1| ComE operon protein 2 [Enterococcus faecalis ERV72]
gi|402396997|gb|EJV30034.1| ComE operon protein 2 [Enterococcus faecalis ERV81]
gi|402400894|gb|EJV33700.1| ComE operon protein 2 [Enterococcus faecalis ERV85]
gi|402405649|gb|EJV38236.1| ComE operon protein 2 [Enterococcus faecalis ERV93]
gi|427185827|emb|CCO73051.1| ComE operon protein 2 [Enterococcus faecalis str. Symbioflor 1]
gi|429514014|gb|ELA03586.1| comE operon protein 2, putative [Enterococcus faecalis OG1X]
gi|429515571|gb|ELA05083.1| comE operon protein 2, putative [Enterococcus faecalis M7]
Length = 167
Score = 74.7 bits (182), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 45/117 (38%), Positives = 67/117 (57%), Gaps = 6/117 (5%)
Query: 89 LEWHEYFMASAFLVAKRSKDPVTRVGAVIVNEDNKIVGTGYNGMPIGCSD--DEFPWDKN 146
+ W +YFM + L++ RS VGA IV D +I+ GYNG G + DE + +
Sbjct: 4 IPWDQYFMGQSVLLSLRSTCTRLTVGATIVR-DKRIIAGGYNGSVSGGTHCIDEGCYVVD 62
Query: 147 THDELDMCHAEMNAILN--KNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIYMCD 201
H + HAEMNAIL K T+ ++Y + FPC +C K+I+Q+GIK++ Y+ D
Sbjct: 63 NHC-VRTIHAEMNAILQCAKFGVPTEGAEIYVTHFPCLQCTKMILQAGIKKIYYLKD 118
Score = 43.1 bits (100), Expect = 0.065, Method: Compositional matrix adjust.
Identities = 20/46 (43%), Positives = 31/46 (67%), Gaps = 2/46 (4%)
Query: 1 MNAILN--KNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIYMCD 44
MNAIL K T+ ++Y + FPC +C K+I+Q+GIK++ Y+ D
Sbjct: 73 MNAILQCAKFGVPTEGAEIYVTHFPCLQCTKMILQAGIKKIYYLKD 118
>gi|365882906|ref|ZP_09422090.1| CMP/dCMP deaminase zinc-binding [Bradyrhizobium sp. ORS 375]
gi|365288612|emb|CCD94621.1| CMP/dCMP deaminase zinc-binding [Bradyrhizobium sp. ORS 375]
Length = 155
Score = 74.7 bits (182), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 42/117 (35%), Positives = 63/117 (53%), Gaps = 21/117 (17%)
Query: 93 EYFMASAFLVAKRSKDPVTRVGAVIVNEDNKIV-GTGYNGMPIGCSDD---------EFP 142
+Y+M A L A +SKD +VG IV+E + +V TG+NG P G +D+ ++
Sbjct: 6 DYWMDQAALAATQSKDRSRKVGCAIVDERHGVVVSTGWNGFPRGVNDNVEARHERPAKYK 65
Query: 143 WDKNTHDELDMCHAEMNAILN--KNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVI 197
W + HAE NAI N + T C ++ FPC++CA+ IIQSGI ++
Sbjct: 66 WTE---------HAERNAIFNAARRGTSTDGCTIFLPWFPCSDCARAIIQSGISRIV 113
Score = 42.7 bits (99), Expect = 0.091, Method: Compositional matrix adjust.
Identities = 17/41 (41%), Positives = 25/41 (60%), Gaps = 2/41 (4%)
Query: 2 NAILN--KNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVI 40
NAI N + T C ++ FPC++CA+ IIQSGI ++
Sbjct: 73 NAIFNAARRGTSTDGCTIFLPWFPCSDCARAIIQSGISRIV 113
>gi|288555665|ref|YP_003427600.1| DNA binding and uptake late competence protein [Bacillus
pseudofirmus OF4]
gi|288546825|gb|ADC50708.1| late competence operon required for DNA binding and uptake
[Bacillus pseudofirmus OF4]
Length = 189
Score = 74.7 bits (182), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 49/119 (41%), Positives = 64/119 (53%), Gaps = 10/119 (8%)
Query: 89 LEWHEYFMASAFLVAKRSKDPVTRVGAVIVNEDNKIVGTGYNGMPIG---CSDDE-FPWD 144
+ W +YFMA + L+A RS VGA IV E +I+ GYNG G C D + D
Sbjct: 4 ISWDQYFMAQSHLLALRSACTRLMVGATIVRE-KRIIAGGYNGSVSGSDHCIDQGCYVVD 62
Query: 145 KNTHDELDMCHAEMNAILN--KNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIYMCD 201
H + HAE+NA+L K T+ +LY + FPC C K IIQ+GIK+V Y D
Sbjct: 63 ---HHCIRTIHAEVNALLQCAKFGVPTEGAELYVTHFPCVHCTKSIIQAGIKKVFYASD 118
Score = 43.1 bits (100), Expect = 0.074, Method: Compositional matrix adjust.
Identities = 26/66 (39%), Positives = 36/66 (54%), Gaps = 6/66 (9%)
Query: 1 MNAILN--KNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIYMCDKHKQKPATIASKRM 58
+NA+L K T+ +LY + FPC C K IIQ+GIK+V Y D +K P + +
Sbjct: 73 VNALLQCAKFGVPTEGAELYVTHFPCVHCTKSIIQAGIKKVFYASD-YKNHPYAV---EL 128
Query: 59 FDAAKV 64
F A V
Sbjct: 129 FKEAGV 134
>gi|322374651|ref|ZP_08049165.1| cytidine and deoxycytidylate deaminase family protein
[Streptococcus sp. C300]
gi|321280151|gb|EFX57190.1| cytidine and deoxycytidylate deaminase family protein
[Streptococcus sp. C300]
Length = 155
Score = 74.7 bits (182), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 48/120 (40%), Positives = 63/120 (52%), Gaps = 7/120 (5%)
Query: 89 LEWHEYFMASAFLVAKRSKDPVTRVGAVIVNEDNKIVGTGYNGMPIG---CSDDEFPWDK 145
L W EYF A A L+A RS +VGAV+V +DNK++ TGYNG G C D E +
Sbjct: 6 LAWDEYFAAQALLIANRSTCKRAKVGAVLV-KDNKVISTGYNGSVSGTEHCIDHECLVIE 64
Query: 146 NTHDELDMCHAEMNAILNKNSADTKR-CKLYTSLFPCNECAKVIIQSGIKEVIYMCDKQM 204
+ HAE+NAIL R Y + FPC C K ++Q G K V+Y+ +M
Sbjct: 65 G--HCVRTLHAEVNAILQGAERGVPRGFTAYVTHFPCLNCTKQLLQVGCKRVVYINQYRM 122
>gi|306829176|ref|ZP_07462366.1| cytidine and deoxycytidylate deaminase [Streptococcus mitis ATCC
6249]
gi|304428262|gb|EFM31352.1| cytidine and deoxycytidylate deaminase [Streptococcus mitis ATCC
6249]
Length = 155
Score = 74.7 bits (182), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 48/120 (40%), Positives = 63/120 (52%), Gaps = 7/120 (5%)
Query: 89 LEWHEYFMASAFLVAKRSKDPVTRVGAVIVNEDNKIVGTGYNGMPIG---CSDDEFPWDK 145
L W EYF A A L+A RS +VGAV+V +DNK++ TGYNG G C D E +
Sbjct: 6 LAWDEYFAAQALLIANRSTCKRAKVGAVLV-KDNKVISTGYNGSVSGTEHCIDHECLVIE 64
Query: 146 NTHDELDMCHAEMNAILNKNSADTKR-CKLYTSLFPCNECAKVIIQSGIKEVIYMCDKQM 204
+ HAE+NAIL R Y + FPC C K ++Q G K V+Y+ +M
Sbjct: 65 G--HCVRTLHAEVNAILQGAERGVPRGFTAYVTHFPCLNCTKQLLQVGCKRVVYINQYRM 122
>gi|229117824|ref|ZP_04247188.1| ComE operon protein 2 [Bacillus cereus Rock1-3]
gi|228665621|gb|EEL21099.1| ComE operon protein 2 [Bacillus cereus Rock1-3]
Length = 188
Score = 74.7 bits (182), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 48/119 (40%), Positives = 64/119 (53%), Gaps = 10/119 (8%)
Query: 89 LEWHEYFMASAFLVAKRSKDPVTRVGAVIVNEDNKIVGTGYNGMPIG---CSDDE-FPWD 144
+ W +YFM + L++ RS VGA IV D +I+ GYNG G C DD + D
Sbjct: 7 ISWDQYFMTQSHLLSLRSTCTRLAVGATIVR-DKRIIAGGYNGSIKGGVHCIDDGCYVID 65
Query: 145 KNTHDELDMCHAEMNAILN--KNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIYMCD 201
+ + HAEMNA+L K A T+ ++Y + FPC +C K IIQSGI V Y D
Sbjct: 66 NHC---VRTIHAEMNALLQCAKFGAKTEEAEIYVTHFPCLQCCKAIIQSGITAVYYAQD 121
Score = 45.8 bits (107), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 28/66 (42%), Positives = 37/66 (56%), Gaps = 6/66 (9%)
Query: 1 MNAILN--KNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIYMCDKHKQKPATIASKRM 58
MNA+L K A T+ ++Y + FPC +C K IIQSGI V Y D +K P I +
Sbjct: 76 MNALLQCAKFGAKTEEAEIYVTHFPCLQCCKAIIQSGITAVYYAQD-YKNHPYAI---EL 131
Query: 59 FDAAKV 64
F+ A V
Sbjct: 132 FEQANV 137
>gi|126653876|ref|ZP_01725723.1| late competence protein ComEB [Bacillus sp. B14905]
gi|126589601|gb|EAZ83740.1| late competence protein ComEB [Bacillus sp. B14905]
Length = 189
Score = 74.7 bits (182), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 48/119 (40%), Positives = 63/119 (52%), Gaps = 10/119 (8%)
Query: 89 LEWHEYFMASAFLVAKRSKDPVTRVGAVIVNEDNKIVGTGYNGMPIGCSDDEFPWDKNTH 148
+ W ++FMA + L+A RS VGA +V D +I+ GYNG G DE +K +
Sbjct: 4 ITWDQFFMAQSHLLALRSTCTRLAVGATVVR-DKRIIAGGYNGSITG---DEHCIEKGCY 59
Query: 149 DELDMC----HAEMNAILN--KNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIYMCD 201
+ C HAEMNA+L K TK LY + FPC C K IIQ+GI+ V Y D
Sbjct: 60 VVDNHCVRTVHAEMNALLQCAKYGTPTKGADLYVTHFPCLPCTKSIIQAGIERVCYATD 118
Score = 43.5 bits (101), Expect = 0.059, Method: Compositional matrix adjust.
Identities = 27/66 (40%), Positives = 36/66 (54%), Gaps = 6/66 (9%)
Query: 1 MNAILN--KNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIYMCDKHKQKPATIASKRM 58
MNA+L K TK LY + FPC C K IIQ+GI+ V Y D +K P ++ +
Sbjct: 73 MNALLQCAKYGTPTKGADLYVTHFPCLPCTKSIIQAGIERVCYATD-YKNNP---YAQEL 128
Query: 59 FDAAKV 64
F+ A V
Sbjct: 129 FEKAGV 134
>gi|423440924|ref|ZP_17417830.1| ComE operon protein 2 [Bacillus cereus BAG4X2-1]
gi|423463989|ref|ZP_17440757.1| ComE operon protein 2 [Bacillus cereus BAG6O-1]
gi|423533352|ref|ZP_17509770.1| ComE operon protein 2 [Bacillus cereus HuB2-9]
gi|402417585|gb|EJV49885.1| ComE operon protein 2 [Bacillus cereus BAG4X2-1]
gi|402420256|gb|EJV52527.1| ComE operon protein 2 [Bacillus cereus BAG6O-1]
gi|402463571|gb|EJV95271.1| ComE operon protein 2 [Bacillus cereus HuB2-9]
Length = 185
Score = 74.7 bits (182), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 48/119 (40%), Positives = 64/119 (53%), Gaps = 10/119 (8%)
Query: 89 LEWHEYFMASAFLVAKRSKDPVTRVGAVIVNEDNKIVGTGYNGMPIG---CSDDE-FPWD 144
+ W +YFM + L++ RS VGA IV D +I+ GYNG G C DD + D
Sbjct: 4 ISWDQYFMTQSHLLSLRSTCTRLAVGATIVR-DKRIIAGGYNGSIKGGVHCIDDGCYVID 62
Query: 145 KNTHDELDMCHAEMNAILN--KNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIYMCD 201
+ + HAEMNA+L K A T+ ++Y + FPC +C K IIQSGI V Y D
Sbjct: 63 NHC---VRTIHAEMNALLQCAKFGAKTEEAEIYVTHFPCLQCCKAIIQSGITAVYYAQD 118
Score = 45.8 bits (107), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 28/66 (42%), Positives = 37/66 (56%), Gaps = 6/66 (9%)
Query: 1 MNAILN--KNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIYMCDKHKQKPATIASKRM 58
MNA+L K A T+ ++Y + FPC +C K IIQSGI V Y D +K P I +
Sbjct: 73 MNALLQCAKFGAKTEEAEIYVTHFPCLQCCKAIIQSGITAVYYAQD-YKNHPYAI---EL 128
Query: 59 FDAAKV 64
F+ A V
Sbjct: 129 FEQANV 134
>gi|218234584|ref|YP_002369136.1| competence protein ComE [Bacillus cereus B4264]
gi|423640593|ref|ZP_17616211.1| ComE operon protein 2 [Bacillus cereus VD166]
gi|218162541|gb|ACK62533.1| ComE operon protein 2 [Bacillus cereus B4264]
gi|401279654|gb|EJR85576.1| ComE operon protein 2 [Bacillus cereus VD166]
Length = 185
Score = 74.7 bits (182), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 48/119 (40%), Positives = 64/119 (53%), Gaps = 10/119 (8%)
Query: 89 LEWHEYFMASAFLVAKRSKDPVTRVGAVIVNEDNKIVGTGYNGMPIG---CSDDE-FPWD 144
+ W +YFM + L++ RS VGA IV D +I+ GYNG G C DD + D
Sbjct: 4 ISWDQYFMTQSHLLSLRSTCTRLAVGATIVR-DKRIIAGGYNGSIKGGVHCIDDGCYVID 62
Query: 145 KNTHDELDMCHAEMNAILN--KNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIYMCD 201
+ + HAEMNA+L K A T+ ++Y + FPC +C K IIQSGI V Y D
Sbjct: 63 NHC---VRTIHAEMNALLQCAKFGAKTEEAEIYVTHFPCLQCCKAIIQSGITAVYYAQD 118
Score = 45.8 bits (107), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 28/66 (42%), Positives = 37/66 (56%), Gaps = 6/66 (9%)
Query: 1 MNAILN--KNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIYMCDKHKQKPATIASKRM 58
MNA+L K A T+ ++Y + FPC +C K IIQSGI V Y D +K P I +
Sbjct: 73 MNALLQCAKFGAKTEEAEIYVTHFPCLQCCKAIIQSGITAVYYAQD-YKNHPYAI---EL 128
Query: 59 FDAAKV 64
F+ A V
Sbjct: 129 FEQANV 134
>gi|407472721|ref|YP_006787121.1| CMP/dCMP deaminase zinc-binding protein [Clostridium acidurici 9a]
gi|407049229|gb|AFS77274.1| CMP/dCMP deaminase zinc-binding protein [Clostridium acidurici 9a]
Length = 145
Score = 74.7 bits (182), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 48/119 (40%), Positives = 63/119 (52%), Gaps = 12/119 (10%)
Query: 91 WHEYFMASAFLVAKRSKDPVTRVGAVIVNEDNKIVGTGYNGMP--------IGCSDDEFP 142
W EYFM A + KRS +VGAVIV E +I+ TGYNG+P +GC D+
Sbjct: 5 WDEYFMEIANVAKKRSTCSRRQVGAVIVKE-KRILSTGYNGVPTGIKHCDEVGCLRDKLK 63
Query: 143 WDKNTHDEL-DMCHAEMNAILNKN--SADTKRCKLYTSLFPCNECAKVIIQSGIKEVIY 198
EL HAE NAI+N K LY++ PC C K+II +GI++V+Y
Sbjct: 64 IPSGERHELCRGLHAEQNAIVNAANFGVSLKGSILYSTTQPCILCTKMIINAGIEKVVY 122
>gi|229129607|ref|ZP_04258575.1| ComE operon protein 2 [Bacillus cereus BDRD-Cer4]
gi|229152530|ref|ZP_04280720.1| ComE operon protein 2 [Bacillus cereus m1550]
gi|228630896|gb|EEK87535.1| ComE operon protein 2 [Bacillus cereus m1550]
gi|228653724|gb|EEL09594.1| ComE operon protein 2 [Bacillus cereus BDRD-Cer4]
Length = 188
Score = 74.7 bits (182), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 48/119 (40%), Positives = 64/119 (53%), Gaps = 10/119 (8%)
Query: 89 LEWHEYFMASAFLVAKRSKDPVTRVGAVIVNEDNKIVGTGYNGMPIG---CSDDE-FPWD 144
+ W +YFM + L++ RS VGA IV D +I+ GYNG G C DD + D
Sbjct: 7 ISWDQYFMTQSHLLSLRSTCTRLAVGATIVR-DKRIIAGGYNGSIKGGVHCIDDGCYVID 65
Query: 145 KNTHDELDMCHAEMNAILN--KNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIYMCD 201
+ + HAEMNA+L K A T+ ++Y + FPC +C K IIQSGI V Y D
Sbjct: 66 NHC---VRTIHAEMNALLQCAKFGAKTEEAEIYVTHFPCLQCCKAIIQSGITAVYYAQD 121
Score = 45.4 bits (106), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 28/66 (42%), Positives = 37/66 (56%), Gaps = 6/66 (9%)
Query: 1 MNAILN--KNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIYMCDKHKQKPATIASKRM 58
MNA+L K A T+ ++Y + FPC +C K IIQSGI V Y D +K P I +
Sbjct: 76 MNALLQCAKFGAKTEEAEIYVTHFPCLQCCKAIIQSGITAVYYAQD-YKNHPYAI---EL 131
Query: 59 FDAAKV 64
F+ A V
Sbjct: 132 FEQANV 137
>gi|228941493|ref|ZP_04104043.1| ComE operon protein 2 [Bacillus thuringiensis serovar berliner ATCC
10792]
gi|228974423|ref|ZP_04134991.1| ComE operon protein 2 [Bacillus thuringiensis serovar thuringiensis
str. T01001]
gi|228981018|ref|ZP_04141320.1| ComE operon protein 2 [Bacillus thuringiensis Bt407]
gi|228778678|gb|EEM26943.1| ComE operon protein 2 [Bacillus thuringiensis Bt407]
gi|228785259|gb|EEM33270.1| ComE operon protein 2 [Bacillus thuringiensis serovar thuringiensis
str. T01001]
gi|228818143|gb|EEM64218.1| ComE operon protein 2 [Bacillus thuringiensis serovar berliner ATCC
10792]
Length = 188
Score = 74.7 bits (182), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 48/119 (40%), Positives = 64/119 (53%), Gaps = 10/119 (8%)
Query: 89 LEWHEYFMASAFLVAKRSKDPVTRVGAVIVNEDNKIVGTGYNGMPIG---CSDDE-FPWD 144
+ W +YFM + L++ RS VGA IV D +I+ GYNG G C DD + D
Sbjct: 7 ISWDQYFMTQSHLLSLRSTCTRLAVGATIVR-DKRIIAGGYNGSIKGGVHCIDDGCYVID 65
Query: 145 KNTHDELDMCHAEMNAILN--KNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIYMCD 201
+ + HAEMNA+L K A T+ ++Y + FPC +C K IIQSGI V Y D
Sbjct: 66 NHC---VRTIHAEMNALLQCAKFGAKTEEAEIYVTHFPCLQCCKAIIQSGITAVYYAQD 121
Score = 45.8 bits (107), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 28/66 (42%), Positives = 37/66 (56%), Gaps = 6/66 (9%)
Query: 1 MNAILN--KNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIYMCDKHKQKPATIASKRM 58
MNA+L K A T+ ++Y + FPC +C K IIQSGI V Y D +K P I +
Sbjct: 76 MNALLQCAKFGAKTEEAEIYVTHFPCLQCCKAIIQSGITAVYYAQD-YKNHPYAI---EL 131
Query: 59 FDAAKV 64
F+ A V
Sbjct: 132 FEQANV 137
>gi|429964902|gb|ELA46900.1| hypothetical protein VCUG_01598 [Vavraia culicis 'floridensis']
Length = 264
Score = 74.7 bits (182), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 47/117 (40%), Positives = 62/117 (52%), Gaps = 10/117 (8%)
Query: 91 WHEYFMASAFLVAKRSKDPVTRVGAVIVNEDNKIVGTGYNGMPIG---CSDDEFP---WD 144
W YFM A V+ +S VGA++V + N+IV TGYNG +G C D P
Sbjct: 118 WERYFMDIATFVSYKSACAKRCVGAILV-KGNRIVSTGYNGTAVGTLNCMDGGCPRCCGG 176
Query: 145 KNTHDELDMC---HAEMNAILNKNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIY 198
+ LD+C HAE +A++ S C LY +LFPC C K IIQ+ IK VI+
Sbjct: 177 TPSGSNLDLCVCLHAEESAMMGVFSERLDGCDLYVTLFPCLLCTKKIIQAQIKRVIF 233
Score = 37.7 bits (86), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 18/40 (45%), Positives = 24/40 (60%)
Query: 2 NAILNKNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIY 41
+A++ S C LY +LFPC C K IIQ+ IK VI+
Sbjct: 194 SAMMGVFSERLDGCDLYVTLFPCLLCTKKIIQAQIKRVIF 233
>gi|229076001|ref|ZP_04208974.1| ComE operon protein 2 [Bacillus cereus Rock4-18]
gi|229104958|ref|ZP_04235614.1| ComE operon protein 2 [Bacillus cereus Rock3-28]
gi|407706854|ref|YP_006830439.1| sensor histidine kinase [Bacillus thuringiensis MC28]
gi|228678452|gb|EEL32673.1| ComE operon protein 2 [Bacillus cereus Rock3-28]
gi|228707113|gb|EEL59313.1| ComE operon protein 2 [Bacillus cereus Rock4-18]
gi|407384539|gb|AFU15040.1| ComE operon protein 2 [Bacillus thuringiensis MC28]
Length = 188
Score = 74.7 bits (182), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 48/119 (40%), Positives = 64/119 (53%), Gaps = 10/119 (8%)
Query: 89 LEWHEYFMASAFLVAKRSKDPVTRVGAVIVNEDNKIVGTGYNGMPIG---CSDDE-FPWD 144
+ W +YFM + L++ RS VGA IV D +I+ GYNG G C DD + D
Sbjct: 7 ISWDQYFMTQSHLLSLRSTCTRLAVGATIVR-DKRIIAGGYNGSIKGGVHCIDDGCYVID 65
Query: 145 KNTHDELDMCHAEMNAILN--KNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIYMCD 201
+ + HAEMNA+L K A T+ ++Y + FPC +C K IIQSGI V Y D
Sbjct: 66 NHC---VRTIHAEMNALLQCAKFGAKTEEAEIYVTHFPCLQCCKAIIQSGITAVYYAQD 121
Score = 45.4 bits (106), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 28/66 (42%), Positives = 37/66 (56%), Gaps = 6/66 (9%)
Query: 1 MNAILN--KNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIYMCDKHKQKPATIASKRM 58
MNA+L K A T+ ++Y + FPC +C K IIQSGI V Y D +K P I +
Sbjct: 76 MNALLQCAKFGAKTEEAEIYVTHFPCLQCCKAIIQSGITAVYYAQD-YKNHPYAI---EL 131
Query: 59 FDAAKV 64
F+ A V
Sbjct: 132 FEQANV 137
>gi|422697396|ref|ZP_16755336.1| ComE operon protein 2 [Enterococcus faecalis TX1346]
gi|424760548|ref|ZP_18188160.1| ComE operon protein 2 [Enterococcus faecalis R508]
gi|315174005|gb|EFU18022.1| ComE operon protein 2 [Enterococcus faecalis TX1346]
gi|402403358|gb|EJV36033.1| ComE operon protein 2 [Enterococcus faecalis R508]
Length = 167
Score = 74.7 bits (182), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 45/117 (38%), Positives = 67/117 (57%), Gaps = 6/117 (5%)
Query: 89 LEWHEYFMASAFLVAKRSKDPVTRVGAVIVNEDNKIVGTGYNGMPIGCSD--DEFPWDKN 146
+ W +YFM + L++ RS VGA IV D +I+ GYNG G + DE + +
Sbjct: 4 IPWDQYFMGQSVLLSLRSTCTRLTVGATIVR-DKRIIAGGYNGSVSGGTHCIDEGCYVVD 62
Query: 147 THDELDMCHAEMNAILN--KNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIYMCD 201
H + HAEMNAIL K T+ ++Y + FPC +C K+I+Q+GIK++ Y+ D
Sbjct: 63 NHC-VRTIHAEMNAILQCAKFGVPTEGAEIYVTHFPCLQCTKMILQAGIKKIYYLKD 118
Score = 43.1 bits (100), Expect = 0.067, Method: Compositional matrix adjust.
Identities = 20/46 (43%), Positives = 31/46 (67%), Gaps = 2/46 (4%)
Query: 1 MNAILN--KNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIYMCD 44
MNAIL K T+ ++Y + FPC +C K+I+Q+GIK++ Y+ D
Sbjct: 73 MNAILQCAKFGVPTEGAEIYVTHFPCLQCTKMILQAGIKKIYYLKD 118
>gi|262047267|ref|ZP_06020225.1| dCMP deaminase [Lactobacillus crispatus MV-3A-US]
gi|423319710|ref|ZP_17297585.1| ComE operon protein 2 [Lactobacillus crispatus FB049-03]
gi|423320280|ref|ZP_17298152.1| ComE operon protein 2 [Lactobacillus crispatus FB077-07]
gi|260572512|gb|EEX29074.1| dCMP deaminase [Lactobacillus crispatus MV-3A-US]
gi|405587755|gb|EKB61482.1| ComE operon protein 2 [Lactobacillus crispatus FB049-03]
gi|405607793|gb|EKB80754.1| ComE operon protein 2 [Lactobacillus crispatus FB077-07]
Length = 159
Score = 74.7 bits (182), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 43/122 (35%), Positives = 69/122 (56%), Gaps = 12/122 (9%)
Query: 87 DVLEWHEYFMASAFLVAKRSKDPVTRVGAVIVNEDNKIVGTGYNGMPIGCSDDEFPWDKN 146
D + W +YFM A ++A+RS VG+V+V ++N+I+GTGYNG G + D
Sbjct: 3 DRIPWKQYFMMQALVIAQRSTCNRALVGSVLV-KNNRIIGTGYNGSVSG----QPHCDDV 57
Query: 147 THDELD-----MCHAEMNAILN--KNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIYM 199
H +D H+EMNAI+ K T+ ++Y + FPC C + ++Q+G+K++ Y
Sbjct: 58 GHQMVDGHCVRTIHSEMNAIIQCAKFGVSTENTEIYVTHFPCYNCCRSLLQAGVKKINYY 117
Query: 200 CD 201
D
Sbjct: 118 FD 119
Score = 36.6 bits (83), Expect = 5.9, Method: Compositional matrix adjust.
Identities = 16/46 (34%), Positives = 28/46 (60%), Gaps = 2/46 (4%)
Query: 1 MNAILN--KNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIYMCD 44
MNAI+ K T+ ++Y + FPC C + ++Q+G+K++ Y D
Sbjct: 74 MNAIIQCAKFGVSTENTEIYVTHFPCYNCCRSLLQAGVKKINYYFD 119
>gi|296504819|ref|YP_003666519.1| ComE operon protein 2 [Bacillus thuringiensis BMB171]
gi|423585194|ref|ZP_17561281.1| ComE operon protein 2 [Bacillus cereus VD045]
gi|423631049|ref|ZP_17606796.1| ComE operon protein 2 [Bacillus cereus VD154]
gi|423650191|ref|ZP_17625761.1| ComE operon protein 2 [Bacillus cereus VD169]
gi|423657282|ref|ZP_17632581.1| ComE operon protein 2 [Bacillus cereus VD200]
gi|296325871|gb|ADH08799.1| ComE operon protein 2 [Bacillus thuringiensis BMB171]
gi|401233837|gb|EJR40323.1| ComE operon protein 2 [Bacillus cereus VD045]
gi|401264416|gb|EJR70528.1| ComE operon protein 2 [Bacillus cereus VD154]
gi|401282609|gb|EJR88508.1| ComE operon protein 2 [Bacillus cereus VD169]
gi|401290025|gb|EJR95729.1| ComE operon protein 2 [Bacillus cereus VD200]
Length = 185
Score = 74.7 bits (182), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 48/119 (40%), Positives = 64/119 (53%), Gaps = 10/119 (8%)
Query: 89 LEWHEYFMASAFLVAKRSKDPVTRVGAVIVNEDNKIVGTGYNGMPIG---CSDDE-FPWD 144
+ W +YFM + L++ RS VGA IV D +I+ GYNG G C DD + D
Sbjct: 4 ISWDQYFMTQSHLLSLRSTCTRLAVGATIVR-DKRIIAGGYNGSIKGGVHCIDDGCYVID 62
Query: 145 KNTHDELDMCHAEMNAILN--KNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIYMCD 201
+ + HAEMNA+L K A T+ ++Y + FPC +C K IIQSGI V Y D
Sbjct: 63 NHC---VRTIHAEMNALLQCAKFGAKTEEAEIYVTHFPCLQCCKAIIQSGITAVYYAQD 118
Score = 45.8 bits (107), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 28/66 (42%), Positives = 37/66 (56%), Gaps = 6/66 (9%)
Query: 1 MNAILN--KNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIYMCDKHKQKPATIASKRM 58
MNA+L K A T+ ++Y + FPC +C K IIQSGI V Y D +K P I +
Sbjct: 73 MNALLQCAKFGAKTEEAEIYVTHFPCLQCCKAIIQSGITAVYYAQD-YKNHPYAI---EL 128
Query: 59 FDAAKV 64
F+ A V
Sbjct: 129 FEQANV 134
>gi|228960596|ref|ZP_04122243.1| ComE operon protein 2 [Bacillus thuringiensis serovar pakistani
str. T13001]
gi|229048033|ref|ZP_04193608.1| ComE operon protein 2 [Bacillus cereus AH676]
gi|229111800|ref|ZP_04241346.1| ComE operon protein 2 [Bacillus cereus Rock1-15]
gi|229146898|ref|ZP_04275262.1| ComE operon protein 2 [Bacillus cereus BDRD-ST24]
gi|228636497|gb|EEK92963.1| ComE operon protein 2 [Bacillus cereus BDRD-ST24]
gi|228671556|gb|EEL26854.1| ComE operon protein 2 [Bacillus cereus Rock1-15]
gi|228723277|gb|EEL74647.1| ComE operon protein 2 [Bacillus cereus AH676]
gi|228799075|gb|EEM46045.1| ComE operon protein 2 [Bacillus thuringiensis serovar pakistani
str. T13001]
Length = 188
Score = 74.7 bits (182), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 48/119 (40%), Positives = 64/119 (53%), Gaps = 10/119 (8%)
Query: 89 LEWHEYFMASAFLVAKRSKDPVTRVGAVIVNEDNKIVGTGYNGMPIG---CSDDE-FPWD 144
+ W +YFM + L++ RS VGA IV D +I+ GYNG G C DD + D
Sbjct: 7 ISWDQYFMTQSHLLSLRSTCTRLAVGATIVR-DKRIIAGGYNGSIKGGVHCIDDGCYVID 65
Query: 145 KNTHDELDMCHAEMNAILN--KNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIYMCD 201
+ + HAEMNA+L K A T+ ++Y + FPC +C K IIQSGI V Y D
Sbjct: 66 NHC---VRTIHAEMNALLQCAKFGAKTEEAEIYVTHFPCLQCCKAIIQSGITAVYYAQD 121
Score = 45.4 bits (106), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 28/66 (42%), Positives = 37/66 (56%), Gaps = 6/66 (9%)
Query: 1 MNAILN--KNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIYMCDKHKQKPATIASKRM 58
MNA+L K A T+ ++Y + FPC +C K IIQSGI V Y D +K P I +
Sbjct: 76 MNALLQCAKFGAKTEEAEIYVTHFPCLQCCKAIIQSGITAVYYAQD-YKNHPYAI---EL 131
Query: 59 FDAAKV 64
F+ A V
Sbjct: 132 FEQANV 137
>gi|194336940|ref|YP_002018734.1| zinc-binding CMP/dCMP deaminase [Pelodictyon phaeoclathratiforme
BU-1]
gi|194309417|gb|ACF44117.1| CMP/dCMP deaminase zinc-binding [Pelodictyon phaeoclathratiforme
BU-1]
Length = 177
Score = 74.7 bits (182), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 45/122 (36%), Positives = 65/122 (53%), Gaps = 13/122 (10%)
Query: 89 LEWHEYFMASAFLVAKRSKDPVTRVGAVIVNEDNKIVGTGYNGMPIG---CSDDEFPWDK 145
L W EYFM+ A L+++R+ +GAVIV E N I+ TGYNG P G C++ +
Sbjct: 26 LGWQEYFMSVAHLISRRATCTRGHIGAVIVRE-NSILSTGYNGAPSGLPHCNESNCRIYR 84
Query: 146 NTHDE-------LDMCHAEMNAILN--KNSADTKRCKLYTSLFPCNECAKVIIQSGIKEV 196
+ H + ++ HAE+NAI K+ K +Y + PC C KV+I GIK +
Sbjct: 85 SIHPDGTVEENCVNTIHAEINAIAQAAKHGVSIKDSDIYITASPCIHCLKVLINVGIKTI 144
Query: 197 IY 198
Y
Sbjct: 145 YY 146
>gi|229098798|ref|ZP_04229736.1| ComE operon protein 2 [Bacillus cereus Rock3-29]
gi|228684642|gb|EEL38582.1| ComE operon protein 2 [Bacillus cereus Rock3-29]
Length = 188
Score = 74.7 bits (182), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 48/119 (40%), Positives = 64/119 (53%), Gaps = 10/119 (8%)
Query: 89 LEWHEYFMASAFLVAKRSKDPVTRVGAVIVNEDNKIVGTGYNGMPIG---CSDDE-FPWD 144
+ W +YFM + L++ RS VGA IV D +I+ GYNG G C DD + D
Sbjct: 7 ISWDQYFMTQSHLLSLRSTCTRLAVGATIVR-DKRIIAGGYNGSIKGGVHCIDDGCYVID 65
Query: 145 KNTHDELDMCHAEMNAILN--KNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIYMCD 201
+ + HAEMNA+L K A T+ ++Y + FPC +C K IIQSGI V Y D
Sbjct: 66 NHC---VRTIHAEMNALLQCAKFGAKTEEAEIYVTHFPCLQCCKAIIQSGITAVYYAQD 121
Score = 45.8 bits (107), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 28/66 (42%), Positives = 37/66 (56%), Gaps = 6/66 (9%)
Query: 1 MNAILN--KNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIYMCDKHKQKPATIASKRM 58
MNA+L K A T+ ++Y + FPC +C K IIQSGI V Y D +K P I +
Sbjct: 76 MNALLQCAKFGAKTEEAEIYVTHFPCLQCCKAIIQSGITAVYYAQD-YKNHPYAI---EL 131
Query: 59 FDAAKV 64
F+ A V
Sbjct: 132 FEQANV 137
>gi|449018767|dbj|BAM82169.1| dCMP deaminase [Cyanidioschyzon merolae strain 10D]
Length = 389
Score = 74.7 bits (182), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 45/117 (38%), Positives = 60/117 (51%), Gaps = 10/117 (8%)
Query: 91 WHEYFMASAFLVAKRSKDPVTRVGAVIVNEDNKIVGTGYNGMPIGCSD------DEFPWD 144
W YFM A L + R+ RVGAVIV D++++ TGYNG P G +
Sbjct: 218 WDTYFMRIAELASMRTNCMKRRVGAVIV-RDHRVIATGYNGTPRGTRNCNEGGCQRCNGG 276
Query: 145 KNTHDELDMC---HAEMNAILNKNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIY 198
LD+C HAE NAI+ L+T+L PC C K I+Q+GI+EV+Y
Sbjct: 277 ARAGHALDVCLCLHAEENAIIEAGRERCAGSTLFTNLCPCLACTKKIVQAGIREVVY 333
Score = 39.3 bits (90), Expect = 0.94, Method: Compositional matrix adjust.
Identities = 17/40 (42%), Positives = 24/40 (60%)
Query: 2 NAILNKNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIY 41
NAI+ L+T+L PC C K I+Q+GI+EV+Y
Sbjct: 294 NAIIEAGRERCAGSTLFTNLCPCLACTKKIVQAGIREVVY 333
>gi|241889824|ref|ZP_04777122.1| ComE operon protein 2 [Gemella haemolysans ATCC 10379]
gi|241863446|gb|EER67830.1| ComE operon protein 2 [Gemella haemolysans ATCC 10379]
Length = 153
Score = 74.7 bits (182), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 50/119 (42%), Positives = 63/119 (52%), Gaps = 10/119 (8%)
Query: 89 LEWHEYFMASAFLVAKRSKDPVTRVGAVIVNEDNKIVGTGYNGMPIGCSDDEFPWDKNTH 148
+ W EYFMA + L++ RS VGA IV +D +IV GYNG G DE D
Sbjct: 4 ISWDEYFMAQSHLLSLRSTCSRLSVGATIV-KDKRIVSGGYNGSIKG---DEHCIDVGCK 59
Query: 149 DELDMC----HAEMNAIL--NKNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIYMCD 201
C HAE+NAIL +K T+ +Y + FPC C K IIQ+GIKE+ Y D
Sbjct: 60 VVEGHCVRTIHAEINAILQCSKFGVGTEGATIYVTHFPCLNCTKSIIQAGIKEICYAND 118
Score = 40.4 bits (93), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 22/53 (41%), Positives = 30/53 (56%), Gaps = 2/53 (3%)
Query: 1 MNAIL--NKNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIYMCDKHKQKPA 51
+NAIL +K T+ +Y + FPC C K IIQ+GIKE+ Y D + A
Sbjct: 73 INAILQCSKFGVGTEGATIYVTHFPCLNCTKSIIQAGIKEICYANDYRNNEYA 125
>gi|407974061|ref|ZP_11154971.1| zinc-binding CMP/dCMP deaminase [Nitratireductor indicus C115]
gi|407430422|gb|EKF43096.1| zinc-binding CMP/dCMP deaminase [Nitratireductor indicus C115]
Length = 155
Score = 74.7 bits (182), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 43/107 (40%), Positives = 62/107 (57%), Gaps = 4/107 (3%)
Query: 91 WHEYFMASAFLVAKRSKDPVTRVGAVIVNEDNKIVGTGYNGMPIGCSD-DEFPWDKNTHD 149
W F+ V+ S+D +VGAV+V ++I TGYNG+P G S D+ +D+ + +
Sbjct: 11 WRHRFLGLCDQVSGWSEDRDFKVGAVVVGPGHEIRATGYNGLPRGVSSGDDRRFDRASGE 70
Query: 150 ELDMC-HAEMNAILN--KNSADTKRCKLYTSLFPCNECAKVIIQSGI 193
+ HAE NAI N ++ A C LY + FPC +CA+ IIQSGI
Sbjct: 71 KFFWIEHAERNAIYNAARSGAALAGCTLYVNRFPCADCARAIIQSGI 117
Score = 40.8 bits (94), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 19/37 (51%), Positives = 24/37 (64%), Gaps = 2/37 (5%)
Query: 2 NAILN--KNSADTKRCKLYTSLFPCNECAKVIIQSGI 36
NAI N ++ A C LY + FPC +CA+ IIQSGI
Sbjct: 81 NAIYNAARSGAALAGCTLYVNRFPCADCARAIIQSGI 117
>gi|228923079|ref|ZP_04086371.1| ComE operon protein 2 [Bacillus thuringiensis serovar huazhongensis
BGSC 4BD1]
gi|423582534|ref|ZP_17558645.1| ComE operon protein 2 [Bacillus cereus VD014]
gi|423634850|ref|ZP_17610503.1| ComE operon protein 2 [Bacillus cereus VD156]
gi|228836577|gb|EEM81926.1| ComE operon protein 2 [Bacillus thuringiensis serovar huazhongensis
BGSC 4BD1]
gi|401213413|gb|EJR20154.1| ComE operon protein 2 [Bacillus cereus VD014]
gi|401278836|gb|EJR84766.1| ComE operon protein 2 [Bacillus cereus VD156]
Length = 185
Score = 74.7 bits (182), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 48/119 (40%), Positives = 64/119 (53%), Gaps = 10/119 (8%)
Query: 89 LEWHEYFMASAFLVAKRSKDPVTRVGAVIVNEDNKIVGTGYNGMPIG---CSDDE-FPWD 144
+ W +YFM + L++ RS VGA IV D +I+ GYNG G C DD + D
Sbjct: 4 ISWDQYFMTQSHLLSLRSTCTRLAVGATIVR-DKRIIAGGYNGSIKGGVHCIDDGCYVID 62
Query: 145 KNTHDELDMCHAEMNAILN--KNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIYMCD 201
+ + HAEMNA+L K A T+ ++Y + FPC +C K IIQSGI V Y D
Sbjct: 63 NHC---VRTIHAEMNALLQCAKFGAKTEEAEIYVTHFPCLQCCKAIIQSGITAVYYAQD 118
Score = 45.8 bits (107), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 28/66 (42%), Positives = 37/66 (56%), Gaps = 6/66 (9%)
Query: 1 MNAILN--KNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIYMCDKHKQKPATIASKRM 58
MNA+L K A T+ ++Y + FPC +C K IIQSGI V Y D +K P I +
Sbjct: 73 MNALLQCAKFGAKTEEAEIYVTHFPCLQCCKAIIQSGITAVYYAQD-YKNHPYAI---EL 128
Query: 59 FDAAKV 64
F+ A V
Sbjct: 129 FEQANV 134
>gi|15613897|ref|NP_242200.1| late competence operon protein [Bacillus halodurans C-125]
gi|10173950|dbj|BAB05053.1| late competence operon required for DNA binding and uptake
[Bacillus halodurans C-125]
Length = 188
Score = 74.7 bits (182), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 49/121 (40%), Positives = 65/121 (53%), Gaps = 6/121 (4%)
Query: 89 LEWHEYFMASAFLVAKRSKDPVTRVGAVIVNEDNKIVGTGYNGMPIGCSD--DEFPWDKN 146
+ W +YFMA + L+A RS VGA IV D +I+ GYNG G DE +
Sbjct: 4 ISWDQYFMAQSHLLALRSTCTRLMVGATIVR-DKRIIAGGYNGSISGGPHCIDEGCYVVE 62
Query: 147 THDELDMCHAEMNAILN--KNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIYMCDKQM 204
H + HAE+NA+L K T+ ++Y + FPC C K IIQSGIK+V Y D +
Sbjct: 63 GHC-IRTIHAEVNALLQCAKFGVPTEGAEIYVTHFPCVNCTKAIIQSGIKKVYYATDYKN 121
Query: 205 S 205
S
Sbjct: 122 S 122
Score = 42.4 bits (98), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 23/52 (44%), Positives = 31/52 (59%), Gaps = 3/52 (5%)
Query: 1 MNAILN--KNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIYMCDKHKQKP 50
+NA+L K T+ ++Y + FPC C K IIQSGIK+V Y D +K P
Sbjct: 73 VNALLQCAKFGVPTEGAEIYVTHFPCVNCTKAIIQSGIKKVYYATD-YKNSP 123
>gi|390443708|ref|ZP_10231495.1| cmp/dcmp deaminase zinc-binding protein [Nitritalea halalkaliphila
LW7]
gi|389666105|gb|EIM77562.1| cmp/dcmp deaminase zinc-binding protein [Nitritalea halalkaliphila
LW7]
Length = 164
Score = 74.7 bits (182), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 45/118 (38%), Positives = 65/118 (55%), Gaps = 9/118 (7%)
Query: 90 EWHEYFMASAFLVAKRSKDPVTRVGAVIVNEDNKIVGTGYNGMPIGCS--DDEFPWDKNT 147
++ + FM A +A+RS VGAV+ +D +I+ GYNG P G D+EFP
Sbjct: 5 DFDDIFMELAVNLARRSHCIKKHVGAVL-TKDTRIISVGYNGPPAGTHNCDEEFPETGCA 63
Query: 148 HDELDMC----HAEMNAILN--KNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIYM 199
D C HAE NAIL KN++ + LY +L PC CA++I GI++V+Y+
Sbjct: 64 RDSKGSCTLAIHAEQNAILYAVKNNSSVEGSTLYVTLAPCLACARIIFSMGIRKVVYL 121
Score = 39.3 bits (90), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 18/43 (41%), Positives = 28/43 (65%), Gaps = 2/43 (4%)
Query: 2 NAILN--KNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIYM 42
NAIL KN++ + LY +L PC CA++I GI++V+Y+
Sbjct: 79 NAILYAVKNNSSVEGSTLYVTLAPCLACARIIFSMGIRKVVYL 121
>gi|373462995|ref|ZP_09554655.1| ComE operon protein 2 [Lactobacillus kisonensis F0435]
gi|371765708|gb|EHO54014.1| ComE operon protein 2 [Lactobacillus kisonensis F0435]
Length = 163
Score = 74.7 bits (182), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 46/121 (38%), Positives = 67/121 (55%), Gaps = 10/121 (8%)
Query: 85 VDDVLEWHEYFMASAFLVAKRSKDPVTRVGAVIVNEDNKIVGTGYNGMPIGCSDDEFPWD 144
+D ++W +YFM A L+A RS VGAVIV D +I+ GYNG G D+ D
Sbjct: 6 MDKRIKWDQYFMMQAVLLASRSTCERLSVGAVIV-RDKRIIAGGYNGSVAG---DDHCID 61
Query: 145 KNTHDELDMC----HAEMNAILN--KNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIY 198
+ C HAEMNAIL K T ++Y + FPC +C K+++Q+GI+++ Y
Sbjct: 62 VGCYLVDGHCVRTIHAEMNAILQCAKFGESTDGAEIYVTDFPCLQCTKMLLQAGIRKINY 121
Query: 199 M 199
+
Sbjct: 122 L 122
Score = 40.0 bits (92), Expect = 0.59, Method: Compositional matrix adjust.
Identities = 19/53 (35%), Positives = 32/53 (60%), Gaps = 2/53 (3%)
Query: 1 MNAILN--KNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIYMCDKHKQKPA 51
MNAIL K T ++Y + FPC +C K+++Q+GI+++ Y+ + H A
Sbjct: 79 MNAILQCAKFGESTDGAEIYVTDFPCLQCTKMLLQAGIRKINYLRNYHNDSYA 131
>gi|329767199|ref|ZP_08258726.1| ComE operon protein 2 [Gemella haemolysans M341]
gi|328836866|gb|EGF86513.1| ComE operon protein 2 [Gemella haemolysans M341]
Length = 153
Score = 74.7 bits (182), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 50/119 (42%), Positives = 63/119 (52%), Gaps = 10/119 (8%)
Query: 89 LEWHEYFMASAFLVAKRSKDPVTRVGAVIVNEDNKIVGTGYNGMPIGCSDDEFPWDKNTH 148
+ W EYFMA + L++ RS VGA IV +D +IV GYNG G DE D
Sbjct: 4 ISWDEYFMAQSHLLSLRSTCSRLSVGATIV-KDKRIVSGGYNGSIKG---DEHCIDVGCK 59
Query: 149 DELDMC----HAEMNAIL--NKNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIYMCD 201
C HAE+NAIL +K T+ +Y + FPC C K IIQ+GIKE+ Y D
Sbjct: 60 VVEGHCVRTIHAEINAILQCSKFGVGTEGATIYVTHFPCLNCTKSIIQAGIKEICYAND 118
Score = 40.4 bits (93), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 22/53 (41%), Positives = 30/53 (56%), Gaps = 2/53 (3%)
Query: 1 MNAIL--NKNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIYMCDKHKQKPA 51
+NAIL +K T+ +Y + FPC C K IIQ+GIKE+ Y D + A
Sbjct: 73 INAILQCSKFGVGTEGATIYVTHFPCLNCTKSIIQAGIKEICYANDYRNNEYA 125
>gi|323340654|ref|ZP_08080906.1| competence protein comEB [Lactobacillus ruminis ATCC 25644]
gi|335996839|ref|ZP_08562756.1| competence protein ComEB [Lactobacillus ruminis SPM0211]
gi|417974344|ref|ZP_12615165.1| ComE operon protein 2 [Lactobacillus ruminis ATCC 25644]
gi|323091777|gb|EFZ34397.1| competence protein comEB [Lactobacillus ruminis ATCC 25644]
gi|335351909|gb|EGM53400.1| competence protein ComEB [Lactobacillus ruminis SPM0211]
gi|346329341|gb|EGX97639.1| ComE operon protein 2 [Lactobacillus ruminis ATCC 25644]
Length = 159
Score = 74.7 bits (182), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 43/117 (36%), Positives = 66/117 (56%), Gaps = 10/117 (8%)
Query: 89 LEWHEYFMASAFLVAKRSKDPVTRVGAVIVNEDNKIVGTGYNGMPIGCSDDEFPWDKNTH 148
+ W++YFM A L++ RS VGA++V DN+I+ GYNG S D D+ +
Sbjct: 6 ISWNQYFMLQAILLSLRSTCTRLAVGAILV-RDNRIIAGGYNG---SVSGDVHCLDEGCY 61
Query: 149 DELDMC----HAEMNAILN--KNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIYM 199
C HAEMNA+L K + T +Y + FPC +C K+++Q+GIK++ Y+
Sbjct: 62 VVDGHCVRTIHAEMNAVLQCAKFGSGTDGAVIYVTDFPCLQCTKMLLQAGIKKIYYL 118
Score = 40.4 bits (93), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 19/54 (35%), Positives = 32/54 (59%), Gaps = 2/54 (3%)
Query: 1 MNAILN--KNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIYMCDKHKQKPAT 52
MNA+L K + T +Y + FPC +C K+++Q+GIK++ Y+ + H A
Sbjct: 75 MNAVLQCAKFGSGTDGAVIYVTDFPCLQCTKMLLQAGIKKIYYLRNYHNDPYAV 128
>gi|415885585|ref|ZP_11547513.1| hypothetical protein MGA3_10155 [Bacillus methanolicus MGA3]
gi|387591254|gb|EIJ83573.1| hypothetical protein MGA3_10155 [Bacillus methanolicus MGA3]
Length = 155
Score = 74.7 bits (182), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 49/119 (41%), Positives = 63/119 (52%), Gaps = 10/119 (8%)
Query: 89 LEWHEYFMASAFLVAKRSKDPVTRVGAVIVNEDNKIVGTGYNGMPIGCSDDEFPWDKNTH 148
+ W++YFMA + L+A RS VGA IV D +I+ GYNG G E D +
Sbjct: 4 ISWNQYFMAQSHLLALRSTCTRLAVGATIV-RDKRIIAGGYNGSIAG---GEHCIDVGCY 59
Query: 149 DELDMC----HAEMNAILN--KNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIYMCD 201
+ C HAEMNA+L K T ++Y + FPC +C K IIQSGIK V Y D
Sbjct: 60 VIDNHCVRTIHAEMNALLQCAKFGVPTAGAEIYVTHFPCLQCCKAIIQSGIKTVYYAKD 118
Score = 45.4 bits (106), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 29/66 (43%), Positives = 37/66 (56%), Gaps = 6/66 (9%)
Query: 1 MNAILN--KNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIYMCDKHKQKPATIASKRM 58
MNA+L K T ++Y + FPC +C K IIQSGIK V Y D +K P I +
Sbjct: 73 MNALLQCAKFGVPTAGAEIYVTHFPCLQCCKAIIQSGIKTVYYAKD-YKNHPYAI---EL 128
Query: 59 FDAAKV 64
F+ AKV
Sbjct: 129 FEKAKV 134
>gi|365925100|ref|ZP_09447863.1| ComE operon protein 2 [Lactobacillus mali KCTC 3596 = DSM 20444]
gi|420266179|ref|ZP_14768669.1| ComE operon protein 2 [Lactobacillus mali KCTC 3596 = DSM 20444]
gi|394426197|gb|EJE99080.1| ComE operon protein 2 [Lactobacillus mali KCTC 3596 = DSM 20444]
Length = 165
Score = 74.7 bits (182), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 43/117 (36%), Positives = 66/117 (56%), Gaps = 10/117 (8%)
Query: 89 LEWHEYFMASAFLVAKRSKDPVTRVGAVIVNEDNKIVGTGYNGMPIGCSDDEFPWDKNTH 148
+ W++YFM A L++ RS VGA++V D +++ GYNG S DE D +
Sbjct: 6 IPWNQYFMMQAVLLSLRSTCERLSVGAILV-RDKRVIAGGYNG---SVSGDEHCIDHGCY 61
Query: 149 DELDMC----HAEMNAILN--KNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIYM 199
C HAEMNA+L K T+ ++Y + FPC +C K+++QSGIK++ Y+
Sbjct: 62 LVDGHCVRTIHAEMNAVLQCAKFGVATEGAEVYVTDFPCLQCTKMLLQSGIKKIYYL 118
Score = 42.4 bits (98), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 19/48 (39%), Positives = 32/48 (66%), Gaps = 2/48 (4%)
Query: 1 MNAILN--KNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIYMCDKH 46
MNA+L K T+ ++Y + FPC +C K+++QSGIK++ Y+ + H
Sbjct: 75 MNAVLQCAKFGVATEGAEVYVTDFPCLQCTKMLLQSGIKKIYYLRNYH 122
>gi|42518285|ref|NP_964215.1| ComE operon protein 2. [Lactobacillus johnsonii NCC 533]
gi|227888945|ref|ZP_04006750.1| competence protein ComEB [Lactobacillus johnsonii ATCC 33200]
gi|385825151|ref|YP_005861493.1| dCMP deaminase [Lactobacillus johnsonii DPC 6026]
gi|41582569|gb|AAS08181.1| ComE operon protein 2 [Lactobacillus johnsonii NCC 533]
gi|227850533|gb|EEJ60619.1| competence protein ComEB [Lactobacillus johnsonii ATCC 33200]
gi|329666595|gb|AEB92543.1| dCMP deaminase [Lactobacillus johnsonii DPC 6026]
Length = 162
Score = 74.7 bits (182), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 43/122 (35%), Positives = 70/122 (57%), Gaps = 12/122 (9%)
Query: 87 DVLEWHEYFMASAFLVAKRSKDPVTRVGAVIVNEDNKIVGTGYNGMPIGCSDDEFPWDKN 146
D + W +YFM A ++A+RS VG+V+V +D++++ TGYNG G + D
Sbjct: 4 DRIPWKQYFMMQALVIAQRSTCDRALVGSVLV-KDDRMIATGYNGSVSG----QPHCDDV 58
Query: 147 THDELD-----MCHAEMNAILN--KNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIYM 199
H +D H+EMNA++ KN T+ ++Y + FPC C+K ++Q+GIK++ Y
Sbjct: 59 GHLMVDGHCVRTIHSEMNALIQCAKNGISTEGTEIYVTYFPCFNCSKCLVQAGIKKINYY 118
Query: 200 CD 201
D
Sbjct: 119 YD 120
Score = 43.1 bits (100), Expect = 0.069, Method: Compositional matrix adjust.
Identities = 19/48 (39%), Positives = 31/48 (64%), Gaps = 2/48 (4%)
Query: 1 MNAILN--KNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIYMCDKH 46
MNA++ KN T+ ++Y + FPC C+K ++Q+GIK++ Y D H
Sbjct: 75 MNALIQCAKNGISTEGTEIYVTYFPCFNCSKCLVQAGIKKINYYYDYH 122
>gi|116628878|ref|YP_814050.1| deoxycytidylate deaminase [Lactobacillus gasseri ATCC 33323]
gi|238852844|ref|ZP_04643249.1| ComE operon protein 2 [Lactobacillus gasseri 202-4]
gi|268318770|ref|YP_003292426.1| hypothetical protein FI9785_275 [Lactobacillus johnsonii FI9785]
gi|282852543|ref|ZP_06261885.1| putative ComE operon protein 2 [Lactobacillus gasseri 224-1]
gi|300362471|ref|ZP_07058647.1| competence protein ComEB [Lactobacillus gasseri JV-V03]
gi|420147813|ref|ZP_14655088.1| ComE operon protein 2 [Lactobacillus gasseri CECT 5714]
gi|116094460|gb|ABJ59612.1| Deoxycytidylate deaminase [Lactobacillus gasseri ATCC 33323]
gi|238834538|gb|EEQ26770.1| ComE operon protein 2 [Lactobacillus gasseri 202-4]
gi|262397145|emb|CAX66159.1| conserved hypothetical protein [Lactobacillus johnsonii FI9785]
gi|282556285|gb|EFB61905.1| putative ComE operon protein 2 [Lactobacillus gasseri 224-1]
gi|300353462|gb|EFJ69334.1| competence protein ComEB [Lactobacillus gasseri JV-V03]
gi|398400960|gb|EJN54491.1| ComE operon protein 2 [Lactobacillus gasseri CECT 5714]
Length = 162
Score = 74.7 bits (182), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 43/122 (35%), Positives = 70/122 (57%), Gaps = 12/122 (9%)
Query: 87 DVLEWHEYFMASAFLVAKRSKDPVTRVGAVIVNEDNKIVGTGYNGMPIGCSDDEFPWDKN 146
D + W +YFM A ++A+RS VG+V+V +D++++ TGYNG G + D
Sbjct: 4 DRIPWKQYFMMQALVIAQRSTCDRALVGSVLV-KDDRMIATGYNGSVSG----QPHCDDV 58
Query: 147 THDELD-----MCHAEMNAILN--KNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIYM 199
H +D H+EMNA++ KN T+ ++Y + FPC C+K ++Q+GIK++ Y
Sbjct: 59 GHLMVDGHCVRTIHSEMNALIQCAKNGISTEGTEIYVTYFPCFNCSKCLVQAGIKKINYY 118
Query: 200 CD 201
D
Sbjct: 119 YD 120
Score = 43.1 bits (100), Expect = 0.069, Method: Compositional matrix adjust.
Identities = 19/48 (39%), Positives = 31/48 (64%), Gaps = 2/48 (4%)
Query: 1 MNAILN--KNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIYMCDKH 46
MNA++ KN T+ ++Y + FPC C+K ++Q+GIK++ Y D H
Sbjct: 75 MNALIQCAKNGISTEGTEIYVTYFPCFNCSKCLVQAGIKKINYYYDYH 122
>gi|422419085|ref|ZP_16496040.1| ComE operon protein 2 [Listeria seeligeri FSL N1-067]
gi|422422207|ref|ZP_16499160.1| ComE operon protein 2 [Listeria seeligeri FSL S4-171]
gi|313633202|gb|EFS00080.1| ComE operon protein 2 [Listeria seeligeri FSL N1-067]
gi|313637784|gb|EFS03135.1| ComE operon protein 2 [Listeria seeligeri FSL S4-171]
Length = 186
Score = 74.7 bits (182), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 50/125 (40%), Positives = 69/125 (55%), Gaps = 11/125 (8%)
Query: 89 LEWHEYFMASAFLVAKRSKDPVTRVGAVIVNEDNKIVGTGYNGMPIG---CSDDE-FPWD 144
+ W ++FMA + L++ RS VGA IV D +I+ GYNG G C++ + D
Sbjct: 4 IAWDQFFMAQSHLISSRSTCTRLMVGATIVR-DKRIIAGGYNGSIAGGDHCAEHGCYVVD 62
Query: 145 KNTHDELDMCHAEMNAILN--KNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIYMCD- 201
+ + HAEMNAIL K A T + +LY + FPC C K IIQ+GIK+V + D
Sbjct: 63 GHC---IRTIHAEMNAILQCAKFGATTDQAELYVTHFPCLACTKSIIQAGIKKVYFAKDY 119
Query: 202 KQMSY 206
K SY
Sbjct: 120 KNHSY 124
Score = 43.5 bits (101), Expect = 0.054, Method: Compositional matrix adjust.
Identities = 23/46 (50%), Positives = 29/46 (63%), Gaps = 2/46 (4%)
Query: 1 MNAILN--KNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIYMCD 44
MNAIL K A T + +LY + FPC C K IIQ+GIK+V + D
Sbjct: 73 MNAILQCAKFGATTDQAELYVTHFPCLACTKSIIQAGIKKVYFAKD 118
>gi|229169074|ref|ZP_04296789.1| ComE operon protein 2 [Bacillus cereus AH621]
gi|228614302|gb|EEK71412.1| ComE operon protein 2 [Bacillus cereus AH621]
Length = 188
Score = 74.3 bits (181), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 47/119 (39%), Positives = 64/119 (53%), Gaps = 10/119 (8%)
Query: 89 LEWHEYFMASAFLVAKRSKDPVTRVGAVIVNEDNKIVGTGYNGMPIG---CSDDE-FPWD 144
+ W +YFM + L++ RS VGA IV D +I+ GYNG G C DD + D
Sbjct: 7 ISWDQYFMTQSHLLSLRSTCTRLAVGATIVR-DKRIIAGGYNGSIKGGVHCIDDGCYVID 65
Query: 145 KNTHDELDMCHAEMNAILN--KNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIYMCD 201
+ + HAEMNA+L K A T+ ++Y + FPC +C K IIQSG+ V Y D
Sbjct: 66 NHC---VRTIHAEMNALLQCAKFGAKTEEAEIYVTHFPCLQCCKAIIQSGVTAVYYAQD 121
Score = 44.7 bits (104), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 26/66 (39%), Positives = 37/66 (56%), Gaps = 6/66 (9%)
Query: 1 MNAILN--KNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIYMCDKHKQKPATIASKRM 58
MNA+L K A T+ ++Y + FPC +C K IIQSG+ V Y D +K P + +
Sbjct: 76 MNALLQCAKFGAKTEEAEIYVTHFPCLQCCKAIIQSGVTAVYYAQD-YKNHPYAV---EL 131
Query: 59 FDAAKV 64
F+ A V
Sbjct: 132 FEQASV 137
>gi|423558090|ref|ZP_17534392.1| ComE operon protein 2 [Bacillus cereus MC67]
gi|401191358|gb|EJQ98380.1| ComE operon protein 2 [Bacillus cereus MC67]
Length = 185
Score = 74.3 bits (181), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 47/119 (39%), Positives = 64/119 (53%), Gaps = 10/119 (8%)
Query: 89 LEWHEYFMASAFLVAKRSKDPVTRVGAVIVNEDNKIVGTGYNGMPIG---CSDDE-FPWD 144
+ W +YFM + L++ RS VGA IV D +I+ GYNG G C DD + D
Sbjct: 4 ISWDQYFMTQSHLLSLRSTCTRLAVGATIVR-DKRIIAGGYNGSIKGGVHCIDDGCYVID 62
Query: 145 KNTHDELDMCHAEMNAILN--KNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIYMCD 201
+ + HAEMNA+L K A T+ ++Y + FPC +C K IIQSG+ V Y D
Sbjct: 63 NHC---VRTIHAEMNALLQCAKFGAKTEEAEIYVTHFPCLQCCKAIIQSGVTAVYYAQD 118
Score = 45.4 bits (106), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 27/66 (40%), Positives = 37/66 (56%), Gaps = 6/66 (9%)
Query: 1 MNAILN--KNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIYMCDKHKQKPATIASKRM 58
MNA+L K A T+ ++Y + FPC +C K IIQSG+ V Y D +K P I +
Sbjct: 73 MNALLQCAKFGAKTEEAEIYVTHFPCLQCCKAIIQSGVTAVYYAQD-YKNHPYAI---EL 128
Query: 59 FDAAKV 64
F+ A V
Sbjct: 129 FEQASV 134
>gi|16800586|ref|NP_470854.1| hypothetical protein lin1518 [Listeria innocua Clip11262]
gi|16413991|emb|CAC96749.1| comEB [Listeria innocua Clip11262]
Length = 186
Score = 74.3 bits (181), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 47/119 (39%), Positives = 66/119 (55%), Gaps = 10/119 (8%)
Query: 89 LEWHEYFMASAFLVAKRSKDPVTRVGAVIVNEDNKIVGTGYNGMPIG---CSDDE-FPWD 144
+ W ++FMA + L++ RS VGA IV D +I+ GYNG G C++ + D
Sbjct: 4 IAWDQFFMAQSHLISSRSTCTRLMVGATIV-RDKRIIAGGYNGSIAGGDHCAEHGCYVVD 62
Query: 145 KNTHDELDMCHAEMNAILN--KNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIYMCD 201
+ + HAEMNAIL K A T + +LY + FPC C K IIQ+GIK+V + D
Sbjct: 63 GHC---IRTIHAEMNAILQCAKFGASTDKAELYVTHFPCLACTKSIIQAGIKKVYFAKD 118
Score = 45.8 bits (107), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 28/66 (42%), Positives = 37/66 (56%), Gaps = 6/66 (9%)
Query: 1 MNAILN--KNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIYMCDKHKQKPATIASKRM 58
MNAIL K A T + +LY + FPC C K IIQ+GIK+V Y +K P + +
Sbjct: 73 MNAILQCAKFGASTDKAELYVTHFPCLACTKSIIQAGIKKV-YFAKDYKNHPYAL---EL 128
Query: 59 FDAAKV 64
F+ A V
Sbjct: 129 FNIAGV 134
>gi|422412971|ref|ZP_16489930.1| ComE operon protein 2 [Listeria innocua FSL S4-378]
gi|313618870|gb|EFR90742.1| ComE operon protein 2 [Listeria innocua FSL S4-378]
Length = 186
Score = 74.3 bits (181), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 47/119 (39%), Positives = 66/119 (55%), Gaps = 10/119 (8%)
Query: 89 LEWHEYFMASAFLVAKRSKDPVTRVGAVIVNEDNKIVGTGYNGMPIG---CSDDE-FPWD 144
+ W ++FMA + L++ RS VGA IV D +I+ GYNG G C++ + D
Sbjct: 4 IAWDQFFMAQSHLISSRSTCTRLMVGATIV-RDKRIIAGGYNGSIAGGDHCAEHGCYVVD 62
Query: 145 KNTHDELDMCHAEMNAILN--KNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIYMCD 201
+ + HAEMNAIL K A T + +LY + FPC C K IIQ+GIK+V + D
Sbjct: 63 GHC---IRTIHAEMNAILQCAKFGASTDKAELYVTHFPCLACTKSIIQAGIKKVYFAKD 118
Score = 45.8 bits (107), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 28/66 (42%), Positives = 37/66 (56%), Gaps = 6/66 (9%)
Query: 1 MNAILN--KNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIYMCDKHKQKPATIASKRM 58
MNAIL K A T + +LY + FPC C K IIQ+GIK+V Y +K P + +
Sbjct: 73 MNAILQCAKFGASTDKAELYVTHFPCLACTKSIIQAGIKKV-YFAKDYKNHPYAL---EL 128
Query: 59 FDAAKV 64
F+ A V
Sbjct: 129 FNIAGV 134
>gi|423521815|ref|ZP_17498288.1| ComE operon protein 2 [Bacillus cereus HuA4-10]
gi|401176477|gb|EJQ83672.1| ComE operon protein 2 [Bacillus cereus HuA4-10]
Length = 185
Score = 74.3 bits (181), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 47/119 (39%), Positives = 64/119 (53%), Gaps = 10/119 (8%)
Query: 89 LEWHEYFMASAFLVAKRSKDPVTRVGAVIVNEDNKIVGTGYNGMPIG---CSDDE-FPWD 144
+ W +YFM + L++ RS VGA IV D +I+ GYNG G C DD + D
Sbjct: 4 ISWDQYFMTQSHLLSLRSTCTRLAVGATIVR-DKRIIAGGYNGSIKGGVHCIDDGCYVID 62
Query: 145 KNTHDELDMCHAEMNAILN--KNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIYMCD 201
+ + HAEMNA+L K A T+ ++Y + FPC +C K IIQSG+ V Y D
Sbjct: 63 NHC---VRTIHAEMNALLQCAKFGAKTEEAEIYVTHFPCLQCCKAIIQSGVTAVYYAQD 118
Score = 45.4 bits (106), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 27/66 (40%), Positives = 37/66 (56%), Gaps = 6/66 (9%)
Query: 1 MNAILN--KNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIYMCDKHKQKPATIASKRM 58
MNA+L K A T+ ++Y + FPC +C K IIQSG+ V Y D +K P I +
Sbjct: 73 MNALLQCAKFGAKTEEAEIYVTHFPCLQCCKAIIQSGVTAVYYAQD-YKNHPYAI---EL 128
Query: 59 FDAAKV 64
F+ A V
Sbjct: 129 FEQASV 134
>gi|421766109|ref|ZP_16202887.1| dCMP deaminase / Late competence protein ComEB [Lactococcus
garvieae DCC43]
gi|407625479|gb|EKF52183.1| dCMP deaminase / Late competence protein ComEB [Lactococcus
garvieae DCC43]
Length = 146
Score = 74.3 bits (181), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 46/113 (40%), Positives = 64/113 (56%), Gaps = 8/113 (7%)
Query: 93 EYFMASAFLVAKRSKDPVTRVGAVIVNEDNKIVGTGYNG----MPIGCSDDEFPWDKNTH 148
EYF +VAKRS +VGA++V D +I+ TGYNG MP C+D DK+ H
Sbjct: 12 EYFKEIVEVVAKRSTCTHAQVGALLVTADGQILSTGYNGSVALMP-HCTDVGCLEDKDGH 70
Query: 149 DELDMCHAEMNAILN--KNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIYM 199
+ HAE NAI K+ + LYT+LFPC C K+++ SG+K + Y+
Sbjct: 71 C-IATVHAEQNAIAQAAKHGVSPEGAILYTTLFPCIACLKLVLASGVKHIKYI 122
Score = 38.5 bits (88), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 15/42 (35%), Positives = 26/42 (61%)
Query: 7 KNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIYMCDKHKQ 48
K+ + LYT+LFPC C K+++ SG+K + Y+ + H +
Sbjct: 87 KHGVSPEGAILYTTLFPCIACLKLVLASGVKHIKYINEYHAK 128
>gi|168333891|ref|ZP_02692129.1| CMP/dCMP deaminase, zinc-binding protein [Epulopiscium sp. 'N.t.
morphotype B']
Length = 158
Score = 74.3 bits (181), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 47/119 (39%), Positives = 61/119 (51%), Gaps = 12/119 (10%)
Query: 91 WHEYFMASAFLVAKRSKDPVTRVGAVIVNEDNKIVGTGYNGMP--------IGCSDDEFP 142
W +YFM A LV RS +VGAV+V +D +I+ TGYNG P +GC +
Sbjct: 5 WDQYFMDIAHLVKTRSTCTRRQVGAVVV-KDKQILSTGYNGAPTSCTHCIELGCMRTKLN 63
Query: 143 WDKNTHDEL-DMCHAEMNAILN--KNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIY 198
EL HAE NAI KN +Y + PC+ CAKV+I SGI ++IY
Sbjct: 64 IPSGERHELCRALHAEQNAITQAAKNGTAVAGAVIYVTAQPCSMCAKVLINSGIAKIIY 122
Score = 37.4 bits (85), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 23/74 (31%), Positives = 37/74 (50%), Gaps = 9/74 (12%)
Query: 7 KNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIYMCDKHKQKPATIASKRMFDAAKVHY 66
KN +Y + PC+ CAKV+I SGI ++IY + P I + + AK+H
Sbjct: 88 KNGTAVAGAVIYVTAQPCSMCAKVLINSGIAKIIY--QGNYPDPLAI---ELLNEAKIH- 141
Query: 67 WSEMDKMNGVQNGS 80
M++ ++N S
Sbjct: 142 ---MEQFGTIENES 152
>gi|423483909|ref|ZP_17460599.1| ComE operon protein 2 [Bacillus cereus BAG6X1-2]
gi|401141460|gb|EJQ49015.1| ComE operon protein 2 [Bacillus cereus BAG6X1-2]
Length = 185
Score = 74.3 bits (181), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 47/119 (39%), Positives = 64/119 (53%), Gaps = 10/119 (8%)
Query: 89 LEWHEYFMASAFLVAKRSKDPVTRVGAVIVNEDNKIVGTGYNGMPIG---CSDDE-FPWD 144
+ W +YFM + L++ RS VGA IV D +I+ GYNG G C DD + D
Sbjct: 4 ISWDQYFMTQSHLLSLRSTCTRLAVGATIVR-DKRIIAGGYNGSIKGGVHCIDDGCYVID 62
Query: 145 KNTHDELDMCHAEMNAILN--KNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIYMCD 201
+ + HAEMNA+L K A T+ ++Y + FPC +C K IIQSG+ V Y D
Sbjct: 63 NHC---VRTIHAEMNALLQCAKFGAKTEEAEIYVTHFPCLQCCKAIIQSGVTAVYYAQD 118
Score = 44.7 bits (104), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 26/66 (39%), Positives = 37/66 (56%), Gaps = 6/66 (9%)
Query: 1 MNAILN--KNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIYMCDKHKQKPATIASKRM 58
MNA+L K A T+ ++Y + FPC +C K IIQSG+ V Y D +K P + +
Sbjct: 73 MNALLQCAKFGAKTEEAEIYVTHFPCLQCCKAIIQSGVTAVYYAQD-YKNHPYAV---EL 128
Query: 59 FDAAKV 64
F+ A V
Sbjct: 129 FEQASV 134
>gi|423452370|ref|ZP_17429223.1| ComE operon protein 2 [Bacillus cereus BAG5X1-1]
gi|401140008|gb|EJQ47565.1| ComE operon protein 2 [Bacillus cereus BAG5X1-1]
Length = 185
Score = 74.3 bits (181), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 47/119 (39%), Positives = 64/119 (53%), Gaps = 10/119 (8%)
Query: 89 LEWHEYFMASAFLVAKRSKDPVTRVGAVIVNEDNKIVGTGYNGMPIG---CSDDE-FPWD 144
+ W +YFM + L++ RS VGA IV D +I+ GYNG G C DD + D
Sbjct: 4 ISWDQYFMTQSHLLSLRSTCTRLAVGATIVR-DKRIIAGGYNGSIKGGVHCIDDGCYVID 62
Query: 145 KNTHDELDMCHAEMNAILN--KNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIYMCD 201
+ + HAEMNA+L K A T+ ++Y + FPC +C K IIQSG+ V Y D
Sbjct: 63 NHC---VRTIHAEMNALLQCAKFGAKTEEAEIYVTHFPCLQCCKAIIQSGVTAVYYAQD 118
Score = 45.4 bits (106), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 27/66 (40%), Positives = 37/66 (56%), Gaps = 6/66 (9%)
Query: 1 MNAILN--KNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIYMCDKHKQKPATIASKRM 58
MNA+L K A T+ ++Y + FPC +C K IIQSG+ V Y D +K P I +
Sbjct: 73 MNALLQCAKFGAKTEEAEIYVTHFPCLQCCKAIIQSGVTAVYYAQD-YKNHPYAI---EL 128
Query: 59 FDAAKV 64
F+ A V
Sbjct: 129 FEQASV 134
>gi|398307017|ref|ZP_10510603.1| ComE operon protein 2 [Bacillus vallismortis DV1-F-3]
Length = 189
Score = 74.3 bits (181), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 47/119 (39%), Positives = 67/119 (56%), Gaps = 10/119 (8%)
Query: 89 LEWHEYFMASAFLVAKRSKDPVTRVGAVIVNEDNKIVGTGYNGMPIG---CSDDE-FPWD 144
+ W++YFMA + L+A RS P VGA IV D +++ GYNG G C+D+ D
Sbjct: 4 ISWNQYFMAQSHLLALRSTCPRLSVGATIVR-DKRMIAGGYNGSIAGGVHCADEGCLMID 62
Query: 145 KNTHDELDMCHAEMNAIL--NKNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIYMCD 201
+ + HAEMNAIL +K T ++Y + +PC +C K IIQ+GIK V + D
Sbjct: 63 DHCARTI---HAEMNAILQCSKFGVPTDGAEIYVTHYPCIQCCKSIIQAGIKTVYFAED 118
Score = 42.7 bits (99), Expect = 0.090, Method: Compositional matrix adjust.
Identities = 28/76 (36%), Positives = 43/76 (56%), Gaps = 7/76 (9%)
Query: 1 MNAIL--NKNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIYMCDKHKQKPATIASKRM 58
MNAIL +K T ++Y + +PC +C K IIQ+GIK V Y + +K P ++ +
Sbjct: 73 MNAILQCSKFGVPTDGAEIYVTHYPCIQCCKSIIQAGIKTV-YFAEDYKTNP---YAQEL 128
Query: 59 FDAAKVHYWS-EMDKM 73
F+ A V E+D+M
Sbjct: 129 FEQAGVTVEQVELDEM 144
>gi|422415984|ref|ZP_16492941.1| ComE operon protein 2 [Listeria innocua FSL J1-023]
gi|313623713|gb|EFR93860.1| ComE operon protein 2 [Listeria innocua FSL J1-023]
Length = 186
Score = 74.3 bits (181), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 47/119 (39%), Positives = 66/119 (55%), Gaps = 10/119 (8%)
Query: 89 LEWHEYFMASAFLVAKRSKDPVTRVGAVIVNEDNKIVGTGYNGMPIG---CSDDE-FPWD 144
+ W ++FMA + L++ RS VGA IV D +I+ GYNG G C++ + D
Sbjct: 4 IAWDQFFMAQSHLISSRSTCTRLMVGATIV-RDKRIIAGGYNGSIAGGDHCAEHGCYVVD 62
Query: 145 KNTHDELDMCHAEMNAILN--KNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIYMCD 201
+ + HAEMNAIL K A T + +LY + FPC C K IIQ+GIK+V + D
Sbjct: 63 GHC---IRTIHAEMNAILQCAKFGASTDKAELYVTHFPCLACTKSIIQAGIKKVYFAKD 118
Score = 45.8 bits (107), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 28/66 (42%), Positives = 37/66 (56%), Gaps = 6/66 (9%)
Query: 1 MNAILN--KNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIYMCDKHKQKPATIASKRM 58
MNAIL K A T + +LY + FPC C K IIQ+GIK+V Y +K P + +
Sbjct: 73 MNAILQCAKFGASTDKAELYVTHFPCLACTKSIIQAGIKKV-YFAKDYKNHPYAL---EL 128
Query: 59 FDAAKV 64
F+ A V
Sbjct: 129 FNIAGV 134
>gi|417850133|ref|ZP_12496048.1| putative ComE operon protein 2 [Streptococcus mitis SK1080]
gi|339455466|gb|EGP68073.1| putative ComE operon protein 2 [Streptococcus mitis SK1080]
Length = 155
Score = 74.3 bits (181), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 47/120 (39%), Positives = 63/120 (52%), Gaps = 7/120 (5%)
Query: 89 LEWHEYFMASAFLVAKRSKDPVTRVGAVIVNEDNKIVGTGYNGMPIG---CSDDEFPWDK 145
L W EYF A A L+A RS +VGA++V +DNK++ TGYNG G C D E +
Sbjct: 6 LAWDEYFAAQALLIANRSTCKRAKVGAILV-KDNKVISTGYNGSVSGTEHCIDHECLVIE 64
Query: 146 NTHDELDMCHAEMNAILNKNSADTKR-CKLYTSLFPCNECAKVIIQSGIKEVIYMCDKQM 204
+ HAE+NAIL R Y + FPC C K ++Q G K V+Y+ +M
Sbjct: 65 G--HCVRTLHAEVNAILQGAERGVPRGFTAYVTHFPCLNCTKQLLQVGCKRVVYINQYRM 122
>gi|163942082|ref|YP_001646966.1| ComE operon protein 2 [Bacillus weihenstephanensis KBAB4]
gi|423368377|ref|ZP_17345809.1| ComE operon protein 2 [Bacillus cereus VD142]
gi|423470548|ref|ZP_17447292.1| ComE operon protein 2 [Bacillus cereus BAG6O-2]
gi|423489510|ref|ZP_17466192.1| ComE operon protein 2 [Bacillus cereus BtB2-4]
gi|423495233|ref|ZP_17471877.1| ComE operon protein 2 [Bacillus cereus CER057]
gi|423497973|ref|ZP_17474590.1| ComE operon protein 2 [Bacillus cereus CER074]
gi|423512440|ref|ZP_17488971.1| ComE operon protein 2 [Bacillus cereus HuA2-1]
gi|423519026|ref|ZP_17495507.1| ComE operon protein 2 [Bacillus cereus HuA2-4]
gi|423591678|ref|ZP_17567709.1| ComE operon protein 2 [Bacillus cereus VD048]
gi|423598357|ref|ZP_17574357.1| ComE operon protein 2 [Bacillus cereus VD078]
gi|423660829|ref|ZP_17635998.1| ComE operon protein 2 [Bacillus cereus VDM022]
gi|423669911|ref|ZP_17644940.1| ComE operon protein 2 [Bacillus cereus VDM034]
gi|423673884|ref|ZP_17648823.1| ComE operon protein 2 [Bacillus cereus VDM062]
gi|163864279|gb|ABY45338.1| ComE operon protein 2 [Bacillus weihenstephanensis KBAB4]
gi|401080704|gb|EJP88988.1| ComE operon protein 2 [Bacillus cereus VD142]
gi|401151326|gb|EJQ58778.1| ComE operon protein 2 [Bacillus cereus CER057]
gi|401160081|gb|EJQ67460.1| ComE operon protein 2 [Bacillus cereus HuA2-4]
gi|401161260|gb|EJQ68627.1| ComE operon protein 2 [Bacillus cereus CER074]
gi|401231811|gb|EJR38313.1| ComE operon protein 2 [Bacillus cereus VD048]
gi|401236627|gb|EJR43084.1| ComE operon protein 2 [Bacillus cereus VD078]
gi|401299038|gb|EJS04638.1| ComE operon protein 2 [Bacillus cereus VDM034]
gi|401300870|gb|EJS06459.1| ComE operon protein 2 [Bacillus cereus VDM022]
gi|401310250|gb|EJS15575.1| ComE operon protein 2 [Bacillus cereus VDM062]
gi|402431746|gb|EJV63810.1| ComE operon protein 2 [Bacillus cereus BtB2-4]
gi|402436214|gb|EJV68246.1| ComE operon protein 2 [Bacillus cereus BAG6O-2]
gi|402449411|gb|EJV81248.1| ComE operon protein 2 [Bacillus cereus HuA2-1]
Length = 185
Score = 74.3 bits (181), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 47/119 (39%), Positives = 64/119 (53%), Gaps = 10/119 (8%)
Query: 89 LEWHEYFMASAFLVAKRSKDPVTRVGAVIVNEDNKIVGTGYNGMPIG---CSDDE-FPWD 144
+ W +YFM + L++ RS VGA IV D +I+ GYNG G C DD + D
Sbjct: 4 ISWDQYFMTQSHLLSLRSTCTRLAVGATIVR-DKRIIAGGYNGSIKGGVHCIDDGCYVID 62
Query: 145 KNTHDELDMCHAEMNAILN--KNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIYMCD 201
+ + HAEMNA+L K A T+ ++Y + FPC +C K IIQSG+ V Y D
Sbjct: 63 NHC---VRTIHAEMNALLQCAKFGAKTEEAEIYVTHFPCLQCCKAIIQSGVTAVYYAQD 118
Score = 44.7 bits (104), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 26/66 (39%), Positives = 37/66 (56%), Gaps = 6/66 (9%)
Query: 1 MNAILN--KNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIYMCDKHKQKPATIASKRM 58
MNA+L K A T+ ++Y + FPC +C K IIQSG+ V Y D +K P + +
Sbjct: 73 MNALLQCAKFGAKTEEAEIYVTHFPCLQCCKAIIQSGVTAVYYAQD-YKNHPYAV---EL 128
Query: 59 FDAAKV 64
F+ A V
Sbjct: 129 FEQASV 134
>gi|229013547|ref|ZP_04170680.1| ComE operon protein 2 [Bacillus mycoides DSM 2048]
gi|229062025|ref|ZP_04199350.1| ComE operon protein 2 [Bacillus cereus AH603]
gi|228717177|gb|EEL68852.1| ComE operon protein 2 [Bacillus cereus AH603]
gi|228747707|gb|EEL97577.1| ComE operon protein 2 [Bacillus mycoides DSM 2048]
Length = 188
Score = 74.3 bits (181), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 47/119 (39%), Positives = 64/119 (53%), Gaps = 10/119 (8%)
Query: 89 LEWHEYFMASAFLVAKRSKDPVTRVGAVIVNEDNKIVGTGYNGMPIG---CSDDE-FPWD 144
+ W +YFM + L++ RS VGA IV D +I+ GYNG G C DD + D
Sbjct: 7 ISWDQYFMTQSHLLSLRSTCTRLAVGATIVR-DKRIIAGGYNGSIKGGVHCIDDGCYVID 65
Query: 145 KNTHDELDMCHAEMNAILN--KNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIYMCD 201
+ + HAEMNA+L K A T+ ++Y + FPC +C K IIQSG+ V Y D
Sbjct: 66 NHC---VRTIHAEMNALLQCAKFGAKTEEAEIYVTHFPCLQCCKAIIQSGVTAVYYAQD 121
Score = 44.7 bits (104), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 26/66 (39%), Positives = 37/66 (56%), Gaps = 6/66 (9%)
Query: 1 MNAILN--KNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIYMCDKHKQKPATIASKRM 58
MNA+L K A T+ ++Y + FPC +C K IIQSG+ V Y D +K P + +
Sbjct: 76 MNALLQCAKFGAKTEEAEIYVTHFPCLQCCKAIIQSGVTAVYYAQD-YKNHPYAV---EL 131
Query: 59 FDAAKV 64
F+ A V
Sbjct: 132 FEQASV 137
>gi|347521487|ref|YP_004779058.1| dCMP deaminase [Lactococcus garvieae ATCC 49156]
gi|385832871|ref|YP_005870646.1| dCMP deaminase [Lactococcus garvieae Lg2]
gi|420144252|ref|ZP_14651740.1| dCMP deaminase [Lactococcus garvieae IPLA 31405]
gi|343180055|dbj|BAK58394.1| dCMP deaminase [Lactococcus garvieae ATCC 49156]
gi|343182024|dbj|BAK60362.1| dCMP deaminase [Lactococcus garvieae Lg2]
gi|391855704|gb|EIT66253.1| dCMP deaminase [Lactococcus garvieae IPLA 31405]
Length = 146
Score = 74.3 bits (181), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 46/113 (40%), Positives = 64/113 (56%), Gaps = 8/113 (7%)
Query: 93 EYFMASAFLVAKRSKDPVTRVGAVIVNEDNKIVGTGYNG----MPIGCSDDEFPWDKNTH 148
EYF +VAKRS +VGA++V D +I+ TGYNG MP C+D DK+ H
Sbjct: 12 EYFKEIVEVVAKRSTCTHAQVGALLVTADGQILSTGYNGSVALMP-HCTDVGCLEDKDGH 70
Query: 149 DELDMCHAEMNAILN--KNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIYM 199
+ HAE NAI K+ + LYT+LFPC C K+++ SG+K + Y+
Sbjct: 71 C-IATVHAEQNAIAQAAKHGVSPEGAILYTTLFPCIACLKLVLASGVKHIKYI 122
Score = 41.2 bits (95), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 19/51 (37%), Positives = 30/51 (58%), Gaps = 2/51 (3%)
Query: 2 NAILN--KNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIYMCDKHKQKP 50
NAI K+ + LYT+LFPC C K+++ SG+K + Y+ + H + P
Sbjct: 80 NAIAQAAKHGVSPEGAILYTTLFPCIACLKLVLASGVKHIKYINEYHAKNP 130
>gi|386026855|ref|YP_005947631.1| putative deoxycytidylate deaminase; DNA internalization-related
competence protein [Listeria monocytogenes M7]
gi|336023436|gb|AEH92573.1| putative deoxycytidylate deaminase; DNA internalization-related
competence protein [Listeria monocytogenes M7]
Length = 186
Score = 74.3 bits (181), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 47/119 (39%), Positives = 66/119 (55%), Gaps = 10/119 (8%)
Query: 89 LEWHEYFMASAFLVAKRSKDPVTRVGAVIVNEDNKIVGTGYNGMPIG---CSDDE-FPWD 144
+ W ++FMA + L++ RS VGA IV D +I+ GYNG G C++ + D
Sbjct: 4 IAWDQFFMAQSHLISSRSTCTRLMVGATIV-RDKRIIAGGYNGSIAGGDHCAEHGCYVVD 62
Query: 145 KNTHDELDMCHAEMNAILN--KNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIYMCD 201
+ + HAEMNAIL K A T + +LY + FPC C K IIQ+GIK+V + D
Sbjct: 63 GHC---IRTIHAEMNAILQCAKFGATTDKAELYVTHFPCLACTKSIIQAGIKKVYFAKD 118
Score = 45.4 bits (106), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 28/66 (42%), Positives = 37/66 (56%), Gaps = 6/66 (9%)
Query: 1 MNAILN--KNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIYMCDKHKQKPATIASKRM 58
MNAIL K A T + +LY + FPC C K IIQ+GIK+V Y +K P + +
Sbjct: 73 MNAILQCAKFGATTDKAELYVTHFPCLACTKSIIQAGIKKV-YFAKDYKNHPYAL---EL 128
Query: 59 FDAAKV 64
F+ A V
Sbjct: 129 FNIAGV 134
>gi|422409714|ref|ZP_16486675.1| ComE operon protein 2 [Listeria monocytogenes FSL F2-208]
gi|313608725|gb|EFR84550.1| ComE operon protein 2 [Listeria monocytogenes FSL F2-208]
Length = 186
Score = 74.3 bits (181), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 47/119 (39%), Positives = 66/119 (55%), Gaps = 10/119 (8%)
Query: 89 LEWHEYFMASAFLVAKRSKDPVTRVGAVIVNEDNKIVGTGYNGMPIG---CSDDE-FPWD 144
+ W ++FMA + L++ RS VGA IV D +I+ GYNG G C++ + D
Sbjct: 4 IAWDQFFMAQSHLISSRSTCTRLMVGATIV-RDKRIIAGGYNGSIAGGDHCAEHGCYVVD 62
Query: 145 KNTHDELDMCHAEMNAILN--KNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIYMCD 201
+ + HAEMNAIL K A T + +LY + FPC C K IIQ+GIK+V + D
Sbjct: 63 GHC---IRTIHAEMNAILQCAKFGATTDKAELYVTHFPCLACTKSIIQAGIKKVYFAKD 118
Score = 45.4 bits (106), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 28/66 (42%), Positives = 37/66 (56%), Gaps = 6/66 (9%)
Query: 1 MNAILN--KNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIYMCDKHKQKPATIASKRM 58
MNAIL K A T + +LY + FPC C K IIQ+GIK+V Y +K P + +
Sbjct: 73 MNAILQCAKFGATTDKAELYVTHFPCLACTKSIIQAGIKKV-YFAKDYKNHPYAL---EL 128
Query: 59 FDAAKV 64
F+ A V
Sbjct: 129 FNIAGV 134
>gi|146296225|ref|YP_001179996.1| zinc-binding CMP/dCMP deaminase protein [Caldicellulosiruptor
saccharolyticus DSM 8903]
gi|145409801|gb|ABP66805.1| CMP/dCMP deaminase, zinc-binding protein [Caldicellulosiruptor
saccharolyticus DSM 8903]
Length = 151
Score = 74.3 bits (181), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 46/119 (38%), Positives = 65/119 (54%), Gaps = 12/119 (10%)
Query: 91 WHEYFMASAFLVAKRSKDPVTRVGAVIVNEDNKIVGTGYNGMP--------IGCSDDEFP 142
W EYFM +V +RS +VGA+IV +D +I+ TGYNG P +GC ++
Sbjct: 5 WDEYFMQIVDIVKERSTCLRRKVGALIV-KDKRILATGYNGAPSNLPHCEEVGCLREKLN 63
Query: 143 WDKNTHDEL-DMCHAEMNAILN--KNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIY 198
EL HAE NAI+ K + +YT+ +PC CAK+I+ +GIK+VIY
Sbjct: 64 VPSGQRHELCRGLHAEQNAIIQAAKMGVNIDGSVIYTTTYPCVICAKMIVNAGIKKVIY 122
Score = 36.6 bits (83), Expect = 6.5, Method: Compositional matrix adjust.
Identities = 14/25 (56%), Positives = 21/25 (84%)
Query: 17 LYTSLFPCNECAKVIIQSGIKEVIY 41
+YT+ +PC CAK+I+ +GIK+VIY
Sbjct: 98 IYTTTYPCVICAKMIVNAGIKKVIY 122
>gi|410029973|ref|ZP_11279803.1| deoxycytidylate deaminase [Marinilabilia sp. AK2]
Length = 184
Score = 74.3 bits (181), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 48/117 (41%), Positives = 62/117 (52%), Gaps = 9/117 (7%)
Query: 91 WHEYFMASAFLVAKRSKDPVTRVGAVIVNEDNKIVGTGYNGMPIGCS--DDEFPWDKNTH 148
+ + FM A +AKRS VGAV+ +D +I+ GYNG P G D+EFP T
Sbjct: 30 FDDIFMELAVNLAKRSHCIKKHVGAVL-TKDTRIISIGYNGPPAGTHNCDEEFPETGCTR 88
Query: 149 DELDMC----HAEMNAILN--KNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIYM 199
D C HAE NAIL KN+ LY +L PC CA++I GI +V+YM
Sbjct: 89 DSKGSCTLAIHAEQNAILYAVKNNTSVDGSTLYVTLAPCLACARIIFSIGIVKVVYM 145
Score = 37.4 bits (85), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 19/43 (44%), Positives = 25/43 (58%), Gaps = 2/43 (4%)
Query: 2 NAILN--KNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIYM 42
NAIL KN+ LY +L PC CA++I GI +V+YM
Sbjct: 103 NAILYAVKNNTSVDGSTLYVTLAPCLACARIIFSIGIVKVVYM 145
>gi|46907711|ref|YP_014100.1| zinc-binding protein ComEB [Listeria monocytogenes serotype 4b str.
F2365]
gi|226224084|ref|YP_002758191.1| ComEB protein [Listeria monocytogenes serotype 4b str. CLIP 80459]
gi|254824458|ref|ZP_05229459.1| zinc-binding ComEB family protein [Listeria monocytogenes FSL
J1-194]
gi|254852107|ref|ZP_05241455.1| zinc-binding ComEB family protein [Listeria monocytogenes FSL
R2-503]
gi|254931418|ref|ZP_05264777.1| zinc-binding ComEB family protein [Listeria monocytogenes HPB2262]
gi|254992215|ref|ZP_05274405.1| ComEB protein [Listeria monocytogenes FSL J2-064]
gi|255520859|ref|ZP_05388096.1| ComEB protein [Listeria monocytogenes FSL J1-175]
gi|300764852|ref|ZP_07074842.1| hypothetical protein LMHG_12881 [Listeria monocytogenes FSL N1-017]
gi|386732222|ref|YP_006205718.1| ComEB protein [Listeria monocytogenes 07PF0776]
gi|404281040|ref|YP_006681938.1| deoxycytidylate deaminase [Listeria monocytogenes SLCC2755]
gi|405749827|ref|YP_006673293.1| deoxycytidylate deaminase [Listeria monocytogenes ATCC 19117]
gi|405752703|ref|YP_006676168.1| deoxycytidylate deaminase [Listeria monocytogenes SLCC2378]
gi|405755641|ref|YP_006679105.1| deoxycytidylate deaminase [Listeria monocytogenes SLCC2540]
gi|406704256|ref|YP_006754610.1| deoxycytidylate deaminase [Listeria monocytogenes L312]
gi|417316027|ref|ZP_12102685.1| ComEB protein [Listeria monocytogenes J1816]
gi|417317601|ref|ZP_12104214.1| ComEB protein [Listeria monocytogenes J1-220]
gi|424714358|ref|YP_007015073.1| ComE operon protein 2 [Listeria monocytogenes serotype 4b str.
LL195]
gi|424823245|ref|ZP_18248258.1| ComE operon protein [Listeria monocytogenes str. Scott A]
gi|46880980|gb|AAT04277.1| zinc-binding, ComEB family protein [Listeria monocytogenes serotype
4b str. F2365]
gi|225876546|emb|CAS05255.1| Putative ComEB protein [Listeria monocytogenes serotype 4b str.
CLIP 80459]
gi|258605409|gb|EEW18017.1| zinc-binding ComEB family protein [Listeria monocytogenes FSL
R2-503]
gi|293582968|gb|EFF95000.1| zinc-binding ComEB family protein [Listeria monocytogenes HPB2262]
gi|293593695|gb|EFG01456.1| zinc-binding ComEB family protein [Listeria monocytogenes FSL
J1-194]
gi|300514528|gb|EFK41585.1| hypothetical protein LMHG_12881 [Listeria monocytogenes FSL N1-017]
gi|328465524|gb|EGF36753.1| ComEB protein [Listeria monocytogenes J1816]
gi|328474941|gb|EGF45737.1| ComEB protein [Listeria monocytogenes J1-220]
gi|332311925|gb|EGJ25020.1| ComE operon protein [Listeria monocytogenes str. Scott A]
gi|384390980|gb|AFH80050.1| ComEB protein [Listeria monocytogenes 07PF0776]
gi|404219027|emb|CBY70391.1| deoxycytidylate deaminase [Listeria monocytogenes ATCC 19117]
gi|404221903|emb|CBY73266.1| deoxycytidylate deaminase [Listeria monocytogenes SLCC2378]
gi|404224841|emb|CBY76203.1| deoxycytidylate deaminase [Listeria monocytogenes SLCC2540]
gi|404227675|emb|CBY49080.1| deoxycytidylate deaminase [Listeria monocytogenes SLCC2755]
gi|406361286|emb|CBY67559.1| deoxycytidylate deaminase [Listeria monocytogenes L312]
gi|424013542|emb|CCO64082.1| ComE operon protein 2 [Listeria monocytogenes serotype 4b str.
LL195]
Length = 186
Score = 74.3 bits (181), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 47/119 (39%), Positives = 66/119 (55%), Gaps = 10/119 (8%)
Query: 89 LEWHEYFMASAFLVAKRSKDPVTRVGAVIVNEDNKIVGTGYNGMPIG---CSDDE-FPWD 144
+ W ++FMA + L++ RS VGA IV D +I+ GYNG G C++ + D
Sbjct: 4 IAWDQFFMAQSHLISSRSTCTRLMVGATIV-RDKRIIAGGYNGSIAGGDHCAEHGCYVVD 62
Query: 145 KNTHDELDMCHAEMNAILN--KNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIYMCD 201
+ + HAEMNAIL K A T + +LY + FPC C K IIQ+GIK+V + D
Sbjct: 63 GHC---IRTIHAEMNAILQCAKFGATTDKAELYVTHFPCLACTKSIIQAGIKKVYFAKD 118
Score = 45.4 bits (106), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 28/66 (42%), Positives = 37/66 (56%), Gaps = 6/66 (9%)
Query: 1 MNAILN--KNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIYMCDKHKQKPATIASKRM 58
MNAIL K A T + +LY + FPC C K IIQ+GIK+V Y +K P + +
Sbjct: 73 MNAILQCAKFGATTDKAELYVTHFPCLACTKSIIQAGIKKV-YFAKDYKNHPYAL---EL 128
Query: 59 FDAAKV 64
F+ A V
Sbjct: 129 FNIAGV 134
>gi|347548866|ref|YP_004855194.1| putative ComEB protein [Listeria ivanovii subsp. ivanovii PAM 55]
gi|346981937|emb|CBW85922.1| Putative ComEB protein [Listeria ivanovii subsp. ivanovii PAM 55]
Length = 186
Score = 74.3 bits (181), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 47/119 (39%), Positives = 66/119 (55%), Gaps = 10/119 (8%)
Query: 89 LEWHEYFMASAFLVAKRSKDPVTRVGAVIVNEDNKIVGTGYNGMPIG---CSDDE-FPWD 144
+ W ++FMA + L++ RS VGA IV D +I+ GYNG G C++ + D
Sbjct: 4 IAWDQFFMAQSHLISSRSTCTRLMVGATIV-RDKRIIAGGYNGSIAGGDHCAEHGCYVVD 62
Query: 145 KNTHDELDMCHAEMNAILN--KNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIYMCD 201
+ + HAEMNAIL K A T + +LY + FPC C K IIQ+GIK+V + D
Sbjct: 63 GHC---IRTIHAEMNAILQCAKFGATTDKAELYVTHFPCLACTKSIIQAGIKKVYFAKD 118
Score = 45.4 bits (106), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 28/66 (42%), Positives = 37/66 (56%), Gaps = 6/66 (9%)
Query: 1 MNAILN--KNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIYMCDKHKQKPATIASKRM 58
MNAIL K A T + +LY + FPC C K IIQ+GIK+V Y +K P + +
Sbjct: 73 MNAILQCAKFGATTDKAELYVTHFPCLACTKSIIQAGIKKV-YFAKDYKNHPYAL---EL 128
Query: 59 FDAAKV 64
F+ A V
Sbjct: 129 FNIAGV 134
>gi|255027259|ref|ZP_05299245.1| hypothetical protein LmonocytFSL_14643 [Listeria monocytogenes FSL
J2-003]
Length = 183
Score = 74.3 bits (181), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 47/119 (39%), Positives = 66/119 (55%), Gaps = 10/119 (8%)
Query: 89 LEWHEYFMASAFLVAKRSKDPVTRVGAVIVNEDNKIVGTGYNGMPIG---CSDDE-FPWD 144
+ W ++FMA + L++ RS VGA IV D +I+ GYNG G C++ + D
Sbjct: 4 IAWDQFFMAQSHLISSRSTCTRLMVGATIV-RDKRIIAGGYNGSIAGGDHCAEHGCYVVD 62
Query: 145 KNTHDELDMCHAEMNAILN--KNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIYMCD 201
+ + HAEMNAIL K A T + +LY + FPC C K IIQ+GIK+V + D
Sbjct: 63 GHC---IRTIHAEMNAILQCAKFGATTDKAELYVTHFPCLACTKSIIQAGIKKVYFAKD 118
Score = 45.4 bits (106), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 28/66 (42%), Positives = 37/66 (56%), Gaps = 6/66 (9%)
Query: 1 MNAILN--KNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIYMCDKHKQKPATIASKRM 58
MNAIL K A T + +LY + FPC C K IIQ+GIK+V Y +K P + +
Sbjct: 73 MNAILQCAKFGATTDKAELYVTHFPCLACTKSIIQAGIKKV-YFAKDYKNHPYAL---EL 128
Query: 59 FDAAKV 64
F+ A V
Sbjct: 129 FNIAGV 134
>gi|16803523|ref|NP_465008.1| hypothetical protein lmo1483 [Listeria monocytogenes EGD-e]
gi|47095436|ref|ZP_00233046.1| comE operon protein 2 [Listeria monocytogenes str. 1/2a F6854]
gi|254827771|ref|ZP_05232458.1| comEB [Listeria monocytogenes FSL N3-165]
gi|254912157|ref|ZP_05262169.1| comE operon protein 2 [Listeria monocytogenes J2818]
gi|254936485|ref|ZP_05268182.1| comEB [Listeria monocytogenes F6900]
gi|290893844|ref|ZP_06556822.1| comEB [Listeria monocytogenes FSL J2-071]
gi|386043794|ref|YP_005962599.1| ComE operon protein 2 [Listeria monocytogenes 10403S]
gi|386047135|ref|YP_005965467.1| ComE operon protein 2 [Listeria monocytogenes J0161]
gi|386050459|ref|YP_005968450.1| late competence protein ComEB [Listeria monocytogenes FSL R2-561]
gi|386053736|ref|YP_005971294.1| ComE operon protein 2 [Listeria monocytogenes Finland 1998]
gi|404283975|ref|YP_006684872.1| deoxycytidylate deaminase [Listeria monocytogenes SLCC2372]
gi|404407921|ref|YP_006690636.1| deoxycytidylate deaminase [Listeria monocytogenes SLCC2376]
gi|404410784|ref|YP_006696372.1| deoxycytidylate deaminase [Listeria monocytogenes SLCC5850]
gi|404413562|ref|YP_006699149.1| deoxycytidylate deaminase [Listeria monocytogenes SLCC7179]
gi|405758531|ref|YP_006687807.1| deoxycytidylate deaminase [Listeria monocytogenes SLCC2479]
gi|16410912|emb|CAC99561.1| comEB [Listeria monocytogenes EGD-e]
gi|47016257|gb|EAL07180.1| comE operon protein 2 [Listeria monocytogenes serotype 1/2a str.
F6854]
gi|258600151|gb|EEW13476.1| comEB [Listeria monocytogenes FSL N3-165]
gi|258609078|gb|EEW21686.1| comEB [Listeria monocytogenes F6900]
gi|290556561|gb|EFD90097.1| comEB [Listeria monocytogenes FSL J2-071]
gi|293590129|gb|EFF98463.1| comE operon protein 2 [Listeria monocytogenes J2818]
gi|345534126|gb|AEO03567.1| ComE operon protein 2 [Listeria monocytogenes J0161]
gi|345537028|gb|AEO06468.1| ComE operon protein 2 [Listeria monocytogenes 10403S]
gi|346424305|gb|AEO25830.1| late competence protein ComEB [Listeria monocytogenes FSL R2-561]
gi|346646387|gb|AEO39012.1| ComE operon protein 2 [Listeria monocytogenes Finland 1998]
gi|404230610|emb|CBY52014.1| deoxycytidylate deaminase [Listeria monocytogenes SLCC5850]
gi|404233477|emb|CBY54880.1| deoxycytidylate deaminase [Listeria monocytogenes SLCC2372]
gi|404236413|emb|CBY57815.1| deoxycytidylate deaminase [Listeria monocytogenes SLCC2479]
gi|404239261|emb|CBY60662.1| deoxycytidylate deaminase [Listeria monocytogenes SLCC7179]
gi|404242070|emb|CBY63470.1| deoxycytidylate deaminase [Listeria monocytogenes SLCC2376]
gi|441471175|emb|CCQ20930.1| ComE operon protein 2 [Listeria monocytogenes]
gi|441474304|emb|CCQ24058.1| ComE operon protein 2 [Listeria monocytogenes N53-1]
Length = 186
Score = 74.3 bits (181), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 47/119 (39%), Positives = 66/119 (55%), Gaps = 10/119 (8%)
Query: 89 LEWHEYFMASAFLVAKRSKDPVTRVGAVIVNEDNKIVGTGYNGMPIG---CSDDE-FPWD 144
+ W ++FMA + L++ RS VGA IV D +I+ GYNG G C++ + D
Sbjct: 4 IAWDQFFMAQSHLISSRSTCTRLMVGATIV-RDKRIIAGGYNGSIAGGDHCAEHGCYVVD 62
Query: 145 KNTHDELDMCHAEMNAILN--KNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIYMCD 201
+ + HAEMNAIL K A T + +LY + FPC C K IIQ+GIK+V + D
Sbjct: 63 GHC---IRTIHAEMNAILQCAKFGATTDKAELYVTHFPCLACTKSIIQAGIKKVYFAKD 118
Score = 45.4 bits (106), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 28/66 (42%), Positives = 37/66 (56%), Gaps = 6/66 (9%)
Query: 1 MNAILN--KNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIYMCDKHKQKPATIASKRM 58
MNAIL K A T + +LY + FPC C K IIQ+GIK+V Y +K P + +
Sbjct: 73 MNAILQCAKFGATTDKAELYVTHFPCLACTKSIIQAGIKKV-YFAKDYKNHPYAL---EL 128
Query: 59 FDAAKV 64
F+ A V
Sbjct: 129 FNIAGV 134
>gi|284801870|ref|YP_003413735.1| hypothetical protein LM5578_1625 [Listeria monocytogenes 08-5578]
gi|284995012|ref|YP_003416780.1| hypothetical protein LM5923_1577 [Listeria monocytogenes 08-5923]
gi|284057432|gb|ADB68373.1| hypothetical protein LM5578_1625 [Listeria monocytogenes 08-5578]
gi|284060479|gb|ADB71418.1| hypothetical protein LM5923_1577 [Listeria monocytogenes 08-5923]
Length = 186
Score = 74.3 bits (181), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 47/119 (39%), Positives = 66/119 (55%), Gaps = 10/119 (8%)
Query: 89 LEWHEYFMASAFLVAKRSKDPVTRVGAVIVNEDNKIVGTGYNGMPIG---CSDDE-FPWD 144
+ W ++FMA + L++ RS VGA IV D +I+ GYNG G C++ + D
Sbjct: 4 IAWDQFFMAQSHLISSRSTCTRLMVGATIV-RDKRIIAGGYNGSIAGGDHCAEHGCYVVD 62
Query: 145 KNTHDELDMCHAEMNAILN--KNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIYMCD 201
+ + HAEMNAIL K A T + +LY + FPC C K IIQ+GIK+V + D
Sbjct: 63 GHC---IRTIHAEMNAILQCAKFGATTDKAELYVTHFPCLACTKSIIQAGIKKVYFAKD 118
Score = 46.2 bits (108), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 33/94 (35%), Positives = 47/94 (50%), Gaps = 11/94 (11%)
Query: 1 MNAILN--KNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIYMCDKHKQKPATIASKRM 58
MNAIL K A T + +LY + FPC C K IIQ+GIK+V Y +K P + +
Sbjct: 73 MNAILQCAKFGATTDKAELYVTHFPCLACTKSIIQAGIKKV-YFAKDYKNHPYAL---EL 128
Query: 59 FDAA-----KVHYWSEMDKMNGVQNGSPHKRVDD 87
F+ A KV + + ++N G H V +
Sbjct: 129 FNIAGVELQKVEFDESVLQVNNWNGGKMHTLVKE 162
>gi|282856020|ref|ZP_06265309.1| ComE operon protein 2 [Pyramidobacter piscolens W5455]
gi|282586139|gb|EFB91418.1| ComE operon protein 2 [Pyramidobacter piscolens W5455]
Length = 180
Score = 74.3 bits (181), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 46/121 (38%), Positives = 59/121 (48%), Gaps = 12/121 (9%)
Query: 90 EWHEYFMASAFLVAKRSKDPVTRVGAVIVNEDNKIVGTGYNGMP--------IGCSDDEF 141
+W YFM A + A RS +VGAVIV D +I+ TGYNG P GC +
Sbjct: 7 DWESYFMTLALVAATRSTCLRRQVGAVIVR-DGQIISTGYNGAPKGTPHCFETGCLRTKL 65
Query: 142 PWDKNTHDEL-DMCHAEMNAILNKNSA--DTKRCKLYTSLFPCNECAKVIIQSGIKEVIY 198
E+ HAEMNAI S T LY + PC+ C K II +GI+ V+Y
Sbjct: 66 GIPSGERHEICRGSHAEMNAIAQAASVGVSTAGASLYCTHSPCSFCTKAIINAGIRRVVY 125
Query: 199 M 199
+
Sbjct: 126 L 126
>gi|377557332|ref|ZP_09786982.1| ComE operon protein 2 [Lactobacillus gastricus PS3]
gi|376165738|gb|EHS84679.1| ComE operon protein 2 [Lactobacillus gastricus PS3]
Length = 160
Score = 74.3 bits (181), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 44/117 (37%), Positives = 63/117 (53%), Gaps = 10/117 (8%)
Query: 89 LEWHEYFMASAFLVAKRSKDPVTRVGAVIVNEDNKIVGTGYNGMPIGCSDDEFPWDKNTH 148
+ W +YFM A L++ RS VGAV+V D +I+G+GYNG S DE D +
Sbjct: 5 IGWDQYFMLQAALLSSRSTCKRLSVGAVLV-RDRRIIGSGYNG---AVSGDEHCIDSECY 60
Query: 149 DELDMC----HAEMNAILN--KNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIYM 199
C HAEMNA+L K T +Y + FPC +C K ++Q+GI ++ Y+
Sbjct: 61 LRDGHCVRTIHAEMNALLQCAKFGTSTDGAVVYVTDFPCLQCTKSLLQAGITQINYL 117
Score = 37.0 bits (84), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 18/53 (33%), Positives = 30/53 (56%), Gaps = 2/53 (3%)
Query: 1 MNAILN--KNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIYMCDKHKQKPA 51
MNA+L K T +Y + FPC +C K ++Q+GI ++ Y+ + H + A
Sbjct: 74 MNALLQCAKFGTSTDGAVVYVTDFPCLQCTKSLLQAGITQINYLRNYHNDEYA 126
>gi|188587446|ref|YP_001918991.1| zinc-binding CMP/dCMP deaminase [Natranaerobius thermophilus
JW/NM-WN-LF]
gi|179352133|gb|ACB86403.1| CMP/dCMP deaminase zinc-binding [Natranaerobius thermophilus
JW/NM-WN-LF]
Length = 154
Score = 73.9 bits (180), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 44/119 (36%), Positives = 64/119 (53%), Gaps = 12/119 (10%)
Query: 90 EWHEYFMASAFLVAKRSKDPVTRVGAVIVNEDNKIVGTGYNGMP--------IGCSDDEF 141
+W YFM A V KRS +VGAV+V+E +I+ TGYNG P GC +E
Sbjct: 6 DWDSYFMEIAGTVKKRSTCLRRQVGAVMVSE-RRILATGYNGAPQDLPHCSETGCLREEL 64
Query: 142 PWDKNTHDEL-DMCHAEMNAILNK--NSADTKRCKLYTSLFPCNECAKVIIQSGIKEVI 197
E+ HAE NAI+ + T+ LYT+ FPC+ CAK+++ +G+ E++
Sbjct: 65 NVPSGERHEICRGLHAEQNAIIQSALHGVTTRGSTLYTTDFPCSLCAKMLVNAGVSEIV 123
Score = 37.0 bits (84), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 15/41 (36%), Positives = 27/41 (65%), Gaps = 2/41 (4%)
Query: 2 NAILNK--NSADTKRCKLYTSLFPCNECAKVIIQSGIKEVI 40
NAI+ + T+ LYT+ FPC+ CAK+++ +G+ E++
Sbjct: 83 NAIIQSALHGVTTRGSTLYTTDFPCSLCAKMLVNAGVSEIV 123
>gi|358465460|ref|ZP_09175407.1| putative ComE operon protein 2 [Streptococcus sp. oral taxon 058
str. F0407]
gi|357065633|gb|EHI75817.1| putative ComE operon protein 2 [Streptococcus sp. oral taxon 058
str. F0407]
Length = 155
Score = 73.9 bits (180), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 48/120 (40%), Positives = 63/120 (52%), Gaps = 7/120 (5%)
Query: 89 LEWHEYFMASAFLVAKRSKDPVTRVGAVIVNEDNKIVGTGYNGMPIG---CSDDEFPWDK 145
L W EYF A A L+A RS +VGAV+V +DNK++ TGYNG G C D E +
Sbjct: 6 LAWDEYFAAQALLIANRSTCKRAKVGAVLV-KDNKVISTGYNGSVSGTEHCIDHECLVIE 64
Query: 146 NTHDELDMCHAEMNAILNKNSADT-KRCKLYTSLFPCNECAKVIIQSGIKEVIYMCDKQM 204
+ HAE+NAIL K Y + FPC C K ++Q G K V+Y+ +M
Sbjct: 65 G--HCVRTLHAEVNAILQGAERGVPKGFTAYVTHFPCLNCTKQLLQVGCKRVVYINQYRM 122
>gi|422878464|ref|ZP_16924930.1| cytidine and deoxycytidylate deaminase [Streptococcus sanguinis
SK1059]
gi|422928317|ref|ZP_16961259.1| cytidine and deoxycytidylate deaminase [Streptococcus sanguinis
ATCC 29667]
gi|422931313|ref|ZP_16964244.1| cytidine and deoxycytidylate deaminase [Streptococcus sanguinis
SK340]
gi|332367208|gb|EGJ44944.1| cytidine and deoxycytidylate deaminase [Streptococcus sanguinis
SK1059]
gi|339617462|gb|EGQ22088.1| cytidine and deoxycytidylate deaminase [Streptococcus sanguinis
ATCC 29667]
gi|339620495|gb|EGQ25065.1| cytidine and deoxycytidylate deaminase [Streptococcus sanguinis
SK340]
Length = 155
Score = 73.9 bits (180), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 48/116 (41%), Positives = 63/116 (54%), Gaps = 9/116 (7%)
Query: 89 LEWHEYFMASAFLVAKRSKDPVTRVGAVIVNEDNKIVGTGYNGMPIG---CSDDE-FPWD 144
L W +YF A A L+A RS +VGAV+V +DNK++ TGYNG G C D E D
Sbjct: 6 LAWDQYFAAQALLIANRSTCKRAKVGAVLV-KDNKVISTGYNGSVSGTEHCIDHECLVID 64
Query: 145 KNTHDELDMCHAEMNAIL-NKNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIYM 199
+ L HAE+NAIL + K Y + FPC C K ++Q G K V+Y+
Sbjct: 65 GHCVRTL---HAEVNAILQGADRGVPKGFTAYVTHFPCLNCTKQLLQVGCKRVVYI 117
>gi|315303230|ref|ZP_07873879.1| ComE operon protein 2 [Listeria ivanovii FSL F6-596]
gi|313628400|gb|EFR96884.1| ComE operon protein 2 [Listeria ivanovii FSL F6-596]
Length = 186
Score = 73.9 bits (180), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 47/119 (39%), Positives = 66/119 (55%), Gaps = 10/119 (8%)
Query: 89 LEWHEYFMASAFLVAKRSKDPVTRVGAVIVNEDNKIVGTGYNGMPIG---CSDDE-FPWD 144
+ W ++FMA + L++ RS VGA IV D +I+ GYNG G C++ + D
Sbjct: 4 IAWDQFFMAQSHLISSRSTCTRLMVGATIVR-DKRIIAGGYNGSIAGGDHCAEHGCYVVD 62
Query: 145 KNTHDELDMCHAEMNAILN--KNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIYMCD 201
+ + HAEMNAIL K A T + +LY + FPC C K IIQ+GIK+V + D
Sbjct: 63 GHC---IRTIHAEMNAILQCAKFGATTDQAELYVTHFPCLACTKSIIQAGIKKVYFAKD 118
Score = 45.4 bits (106), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 28/66 (42%), Positives = 37/66 (56%), Gaps = 6/66 (9%)
Query: 1 MNAILN--KNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIYMCDKHKQKPATIASKRM 58
MNAIL K A T + +LY + FPC C K IIQ+GIK+V Y +K P + +
Sbjct: 73 MNAILQCAKFGATTDQAELYVTHFPCLACTKSIIQAGIKKV-YFAKDYKNHPYAL---EL 128
Query: 59 FDAAKV 64
F+ A V
Sbjct: 129 FELAGV 134
>gi|442805975|ref|YP_007374124.1| ComE operon protein 2 [Clostridium stercorarium subsp. stercorarium
DSM 8532]
gi|442741825|gb|AGC69514.1| ComE operon protein 2 [Clostridium stercorarium subsp. stercorarium
DSM 8532]
Length = 156
Score = 73.9 bits (180), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 46/122 (37%), Positives = 63/122 (51%), Gaps = 12/122 (9%)
Query: 91 WHEYFMASAFLVAKRSKDPVTRVGAVIVNEDNKIVGTGYNGMPIGC---------SDDEF 141
W EYFM LV KRS +VGA+IV +D +I+ TGYNG P+GC D
Sbjct: 5 WDEYFMDIVELVKKRSTCLRRQVGALIV-KDKRILATGYNGAPVGCKHCAEVGCLRDKLG 63
Query: 142 PWDKNTHDELDMCHAEMNAILNKNSADTK--RCKLYTSLFPCNECAKVIIQSGIKEVIYM 199
H+ HAE NAI+ + T +Y + PC CAK+II +GIK++++
Sbjct: 64 IPSGQRHEICRAAHAEQNAIVQAAYSGTSVNGGTMYVTTQPCVLCAKLIINAGIKKIVFK 123
Query: 200 CD 201
D
Sbjct: 124 GD 125
>gi|417935321|ref|ZP_12578640.1| putative ComE operon protein 2 [Streptococcus mitis bv. 2 str.
F0392]
gi|340769814|gb|EGR92332.1| putative ComE operon protein 2 [Streptococcus mitis bv. 2 str.
F0392]
Length = 155
Score = 73.9 bits (180), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 50/124 (40%), Positives = 64/124 (51%), Gaps = 15/124 (12%)
Query: 89 LEWHEYFMASAFLVAKRSKDPVTRVGAVIVNEDNKIVGTGYNGMPIGCSDDEFPWDKNTH 148
L W EYF A A L+A RS +VGAV+V +DNK++ TGYNG S E D H
Sbjct: 6 LAWDEYFAAQALLIANRSTCKRAKVGAVLV-KDNKVISTGYNG---SVSGTEHCID---H 58
Query: 149 DELDM-------CHAEMNAILNKNSADTKR-CKLYTSLFPCNECAKVIIQSGIKEVIYMC 200
D L + HAE+NAIL R Y + FPC C K ++Q G K V+Y+
Sbjct: 59 DCLVIEGHCVRTLHAEVNAILQGAERGVPRGFTAYVTHFPCLNCTKQLLQVGCKRVVYIN 118
Query: 201 DKQM 204
+M
Sbjct: 119 QYRM 122
>gi|270292326|ref|ZP_06198537.1| cytidine and deoxycytidylate deaminase family protein
[Streptococcus sp. M143]
gi|270278305|gb|EFA24151.1| cytidine and deoxycytidylate deaminase family protein
[Streptococcus sp. M143]
Length = 155
Score = 73.9 bits (180), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 48/120 (40%), Positives = 63/120 (52%), Gaps = 7/120 (5%)
Query: 89 LEWHEYFMASAFLVAKRSKDPVTRVGAVIVNEDNKIVGTGYNGMPIG---CSDDEFPWDK 145
L W EYF A A L+A RS +VGAV+V +DNK++ TGYNG G C D E +
Sbjct: 6 LAWDEYFAAQALLIANRSTCKRAKVGAVLV-KDNKVISTGYNGSVSGTEHCIDHECLVIE 64
Query: 146 NTHDELDMCHAEMNAILNKNSADT-KRCKLYTSLFPCNECAKVIIQSGIKEVIYMCDKQM 204
+ HAE+NAIL K Y + FPC C K ++Q G K V+Y+ +M
Sbjct: 65 G--HCVRTLHAEVNAILQGAERGVPKGFTAYVTHFPCLNCTKQLLQVGCKRVVYINQYRM 122
>gi|302875602|ref|YP_003844235.1| zinc-binding CMP/dCMP deaminase [Clostridium cellulovorans 743B]
gi|307690132|ref|ZP_07632578.1| CMP/dCMP deaminase zinc-binding protein [Clostridium cellulovorans
743B]
gi|302578459|gb|ADL52471.1| CMP/dCMP deaminase zinc-binding [Clostridium cellulovorans 743B]
Length = 156
Score = 73.9 bits (180), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 49/125 (39%), Positives = 67/125 (53%), Gaps = 18/125 (14%)
Query: 91 WHEYFMASAFLVAKRSKDPVTRVGAVIVNEDNKIVGTGYNGMPIG-----CSDDEFPWDK 145
W+EYFM A L A+RS VGAVIVN +N+IV TGYNG +G C D +
Sbjct: 21 WNEYFMNLAKLAAERSTCDRANVGAVIVNSENRIVATGYNG-SVGSKTPHCDDIGHVMRE 79
Query: 146 N-----THDELD-MCHAEMNAILNKNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIYM 199
N H E++ +C+ I KNS +Y + FPC C K +IQ+GIK++ Y
Sbjct: 80 NHCIATQHAEINCLCYCAKEGIPVKNSV------IYVTHFPCLNCTKALIQAGIKKIYYS 133
Query: 200 CDKQM 204
D ++
Sbjct: 134 NDYRI 138
>gi|125572136|gb|EAZ13651.1| hypothetical protein OsJ_03568 [Oryza sativa Japonica Group]
Length = 184
Score = 73.9 bits (180), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 31/52 (59%), Positives = 40/52 (76%)
Query: 153 MCHAEMNAILNKNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIYMCDKQM 204
+ HAE+NAILN N A KLY ++FPCNECAK+IIQSG+ EVIY +K++
Sbjct: 81 VVHAEVNAILNTNHASAAGQKLYVTMFPCNECAKIIIQSGVSEVIYFVEKRI 132
Score = 66.6 bits (161), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 36/90 (40%), Positives = 49/90 (54%), Gaps = 9/90 (10%)
Query: 1 MNAILNKNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIYMCDKH--KQKPATIASKRM 58
+NAILN N A KLY ++FPCNECAK+IIQSG+ EVIY +K +AS ++
Sbjct: 86 VNAILNTNHASAAGQKLYVTMFPCNECAKIIIQSGVSEVIYFVEKRIDNSDYVYVASHKL 145
Query: 59 FDAAKVHYWSEMDKMNGV-------QNGSP 81
A V +M+ + +NG P
Sbjct: 146 LSMAGVKVRKHQPQMSQIPIKFQEPRNGEP 175
>gi|410583127|ref|ZP_11320233.1| deoxycytidylate deaminase [Thermaerobacter subterraneus DSM 13965]
gi|410505947|gb|EKP95456.1| deoxycytidylate deaminase [Thermaerobacter subterraneus DSM 13965]
Length = 186
Score = 73.9 bits (180), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 48/122 (39%), Positives = 63/122 (51%), Gaps = 16/122 (13%)
Query: 86 DDVLEWHEYFMASAFLVAKRSKDPVTRVGAVIVNEDNKIVGTGYNGMPIGCSDDEFP--- 142
D W YFM A +VA+RS P VGAV+V D +I+ TGYNG P G FP
Sbjct: 39 DQRPPWDAYFMELAEVVARRSTCPRRHVGAVLVR-DRRILATGYNGAPPG-----FPHCT 92
Query: 143 ----WDKNTHDELDMCHAEMNAILNK--NSADTKRCKLYTSLFPCNECAKVIIQSGIKEV 196
++ H + HAE NAIL + K LYT+ PC CAK++I +G+ V
Sbjct: 93 EAGCLMQDGHC-VRTIHAEANAILQAALHGVTVKGSTLYTTATPCLHCAKLLIGAGVVRV 151
Query: 197 IY 198
+Y
Sbjct: 152 VY 153
>gi|419783268|ref|ZP_14309059.1| putative ComE operon protein 2 [Streptococcus oralis SK610]
gi|383182422|gb|EIC74977.1| putative ComE operon protein 2 [Streptococcus oralis SK610]
Length = 155
Score = 73.9 bits (180), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 50/124 (40%), Positives = 64/124 (51%), Gaps = 15/124 (12%)
Query: 89 LEWHEYFMASAFLVAKRSKDPVTRVGAVIVNEDNKIVGTGYNGMPIGCSDDEFPWDKNTH 148
L W EYF A A L+A RS +VGAV+V +DNK++ TGYNG S E D H
Sbjct: 6 LAWDEYFAAQALLIANRSTCKRAKVGAVLV-KDNKVISTGYNG---SVSGTEHCID---H 58
Query: 149 DELDM-------CHAEMNAILNKNSADTKR-CKLYTSLFPCNECAKVIIQSGIKEVIYMC 200
D L + HAE+NAIL R Y + FPC C K ++Q G K V+Y+
Sbjct: 59 DCLVIEGHCVRTLHAEVNAILQGAERGVPRGFTAYVTHFPCLNCTKQLLQVGCKRVVYIN 118
Query: 201 DKQM 204
+M
Sbjct: 119 QYRM 122
>gi|404449230|ref|ZP_11014221.1| deoxycytidylate deaminase [Indibacter alkaliphilus LW1]
gi|403765334|gb|EJZ26216.1| deoxycytidylate deaminase [Indibacter alkaliphilus LW1]
Length = 160
Score = 73.9 bits (180), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 47/117 (40%), Positives = 62/117 (52%), Gaps = 9/117 (7%)
Query: 91 WHEYFMASAFLVAKRSKDPVTRVGAVIVNEDNKIVGTGYNGMPIGCS--DDEFPWDKNTH 148
+ + FM A +AKRS VGAV+ E +I+ GYNG P G D+EFP
Sbjct: 6 FDDIFMELAVNLAKRSHCIKKHVGAVLTKE-TRIISIGYNGPPAGTHNCDEEFPEHGCAR 64
Query: 149 DELDMC----HAEMNAILN--KNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIYM 199
D C HAE NAIL KN+ + LY +L PC CA++I GIK+V++M
Sbjct: 65 DSKGSCTLALHAEQNAILYAVKNNTSVEGSTLYVTLAPCLACARIIFSMGIKKVVFM 121
Score = 39.7 bits (91), Expect = 0.79, Method: Compositional matrix adjust.
Identities = 19/43 (44%), Positives = 27/43 (62%), Gaps = 2/43 (4%)
Query: 2 NAILN--KNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIYM 42
NAIL KN+ + LY +L PC CA++I GIK+V++M
Sbjct: 79 NAILYAVKNNTSVEGSTLYVTLAPCLACARIIFSMGIKKVVFM 121
>gi|331266750|ref|YP_004326380.1| dCMP deaminase [Streptococcus oralis Uo5]
gi|326683422|emb|CBZ01040.1| dCMP deaminase, competence protein [Streptococcus oralis Uo5]
Length = 155
Score = 73.9 bits (180), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 50/124 (40%), Positives = 64/124 (51%), Gaps = 15/124 (12%)
Query: 89 LEWHEYFMASAFLVAKRSKDPVTRVGAVIVNEDNKIVGTGYNGMPIGCSDDEFPWDKNTH 148
L W EYF A A L+A RS +VGAV+V +DNK++ TGYNG S E D H
Sbjct: 6 LAWDEYFAAQALLIANRSTCKRAKVGAVLV-KDNKVISTGYNG---SVSGTEHCID---H 58
Query: 149 DELDM-------CHAEMNAILNKNSADTKR-CKLYTSLFPCNECAKVIIQSGIKEVIYMC 200
D L + HAE+NAIL R Y + FPC C K ++Q G K V+Y+
Sbjct: 59 DCLVIEGHCVRTLHAEVNAILQGAERGVPRGFTAYVTHFPCLNCTKQLLQVGCKRVVYIN 118
Query: 201 DKQM 204
+M
Sbjct: 119 QYRM 122
>gi|317495073|ref|ZP_07953445.1| ComE operon protein 2 [Gemella morbillorum M424]
gi|316914845|gb|EFV36319.1| ComE operon protein 2 [Gemella morbillorum M424]
Length = 154
Score = 73.9 bits (180), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 49/119 (41%), Positives = 63/119 (52%), Gaps = 10/119 (8%)
Query: 89 LEWHEYFMASAFLVAKRSKDPVTRVGAVIVNEDNKIVGTGYNGMPIGCSDDEFPWDKNTH 148
+ W EYFMA + L++ RS VGA IV +D +IV GYNG G DE D
Sbjct: 4 ISWDEYFMAQSHLLSLRSTCSRLSVGATIV-KDKRIVSGGYNGSIKG---DEHCIDVGCK 59
Query: 149 DELDMC----HAEMNAIL--NKNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIYMCD 201
C HAE+NAIL ++ T+ +Y + FPC C K IIQ+GIKE+ Y D
Sbjct: 60 VVEGHCVRTIHAEINAILQCSRFGVGTEGATIYVTHFPCLNCTKSIIQAGIKEICYAND 118
Score = 39.7 bits (91), Expect = 0.74, Method: Compositional matrix adjust.
Identities = 21/53 (39%), Positives = 30/53 (56%), Gaps = 2/53 (3%)
Query: 1 MNAIL--NKNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIYMCDKHKQKPA 51
+NAIL ++ T+ +Y + FPC C K IIQ+GIKE+ Y D + A
Sbjct: 73 INAILQCSRFGVGTEGATIYVTHFPCLNCTKSIIQAGIKEICYANDYRNNEYA 125
>gi|404417976|ref|ZP_10999758.1| dCMP deaminase [Staphylococcus arlettae CVD059]
gi|403489692|gb|EJY95255.1| dCMP deaminase [Staphylococcus arlettae CVD059]
Length = 153
Score = 73.9 bits (180), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 47/117 (40%), Positives = 63/117 (53%), Gaps = 6/117 (5%)
Query: 89 LEWHEYFMASAFLVAKRSKDPVTRVGAVIVNEDNKIVGTGYNGMPIGCSD--DEFPWDKN 146
++W EYFMA + L+A RS VGA IV +DN+I+ GYNG G DE ++
Sbjct: 4 IKWEEYFMAQSQLLALRSTCERLSVGATIV-KDNRIIAGGYNGSVAGEVHCIDEGCLIED 62
Query: 147 THDELDMCHAEMNAILN--KNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIYMCD 201
H + HAEMNA+L K + +Y + FPC C K IIQ+GI + Y D
Sbjct: 63 GHC-IRTIHAEMNALLQCAKQGVSSAGATIYVTHFPCLNCTKSIIQAGITTIYYAED 118
Score = 39.3 bits (90), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 20/53 (37%), Positives = 26/53 (49%), Gaps = 2/53 (3%)
Query: 1 MNAILN--KNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIYMCDKHKQKPA 51
MNA+L K + +Y + FPC C K IIQ+GI + Y D H A
Sbjct: 73 MNALLQCAKQGVSSAGATIYVTHFPCLNCTKSIIQAGITTIYYAEDYHNHHYA 125
>gi|399528752|ref|YP_006560803.1| dCMP deaminase [Burkholderia phage KL1]
gi|371767588|gb|AEX56122.1| dCMP deaminase [Burkholderia phage KL1]
Length = 161
Score = 73.9 bits (180), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 46/118 (38%), Positives = 58/118 (49%), Gaps = 9/118 (7%)
Query: 90 EWHEYFMASAFLVAKRSKDPVTRVGAVIVNEDNKIVGTGYNGMPIGCSDDEFPWDKNTHD 149
+W F+A A VA SK P R+GAVIV D I GYNG P G D F
Sbjct: 14 KWDARFLALAEHVANWSKGPRKRIGAVIVRPDRSIASLGYNGPPRGFDDAAFLRMTREEQ 73
Query: 150 ELDMCHAEMNAILNKNSADTKR------CKLYTS-LFPCNECAKVIIQSGIKEVIYMC 200
+ HAE NA + AD +R LY S LFPC +CA++I+ G+ V+ C
Sbjct: 74 HAVVIHAEDNAF--RQMADGERYDVKDGYTLYVSPLFPCADCARLIVSYGVSRVVAYC 129
>gi|222099239|ref|YP_002533807.1| Deoxycytidylate deaminase [Thermotoga neapolitana DSM 4359]
gi|221571629|gb|ACM22441.1| Deoxycytidylate deaminase [Thermotoga neapolitana DSM 4359]
Length = 199
Score = 73.9 bits (180), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 46/130 (35%), Positives = 70/130 (53%), Gaps = 12/130 (9%)
Query: 83 KRVDDVLEWHEYFMASAFLVAKRSKDPVTRVGAVIVNEDNKIVGTGYNGMP--------I 134
K+ DD W YFM A +V++RS +VGAVIV +D++I+ TGYN P +
Sbjct: 46 KKPDDRESWDSYFMRIARMVSERSTCFHRKVGAVIV-KDHRILATGYNQPPSKFPHCNEV 104
Query: 135 GCSDDEFPWDKNTHDEL-DMCHAEMNAILN--KNSADTKRCKLYTSLFPCNECAKVIIQS 191
GC D+ + H E+ HAE NA++ K +Y + PC+ CA++++ +
Sbjct: 105 GCIRDDLGINSGEHQEICYALHAEQNALMQAAKFGIAVNGATIYVTHKPCSICARLLVNA 164
Query: 192 GIKEVIYMCD 201
GIK V+Y D
Sbjct: 165 GIKRVVYEKD 174
>gi|380032886|ref|YP_004889877.1| ComE operon protein 1, dCMP deaminase [Lactobacillus plantarum
WCFS1]
gi|342242129|emb|CCC79363.1| ComE operon protein 1, dCMP deaminase [Lactobacillus plantarum
WCFS1]
Length = 161
Score = 73.9 bits (180), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 46/120 (38%), Positives = 67/120 (55%), Gaps = 10/120 (8%)
Query: 86 DDVLEWHEYFMASAFLVAKRSKDPVTRVGAVIVNEDNKIVGTGYNGMPIG---CSDDE-F 141
D + W +YFM A L+A RS VGA IV D +I+ GYNG G C D+ +
Sbjct: 3 DQRIPWDQYFMMQAVLLASRSTCERLSVGATIV-RDKRIIAGGYNGSVSGDVHCIDEGCY 61
Query: 142 PWDKNTHDELDMCHAEMNAILN--KNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIYM 199
D + + HAEMNAIL K A T ++Y + FPC +C K+++Q+GI+++ Y+
Sbjct: 62 LVDGHC---VRTIHAEMNAILQCAKFGAATDGAEIYVTDFPCLQCTKMLLQAGIQKIHYL 118
Score = 45.1 bits (105), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 47/78 (60%), Gaps = 4/78 (5%)
Query: 1 MNAILN--KNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIYMCDKHKQKPA-TIASKR 57
MNAIL K A T ++Y + FPC +C K+++Q+GI+++ Y+ + H A ++ ++
Sbjct: 75 MNAILQCAKFGAATDGAEIYVTDFPCLQCTKMLLQAGIQKIHYLRNYHNDAYAMSLIERK 134
Query: 58 MFDAAKVHY-WSEMDKMN 74
+V + S++DK+N
Sbjct: 135 HVALQQVQFDQSDLDKLN 152
>gi|294934867|ref|XP_002781251.1| conserved hypothetical protein [Perkinsus marinus ATCC 50983]
gi|239891645|gb|EER13046.1| conserved hypothetical protein [Perkinsus marinus ATCC 50983]
Length = 73
Score = 73.9 bits (180), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 33/65 (50%), Positives = 43/65 (66%)
Query: 1 MNAILNKNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIYMCDKHKQKPATIASKRMFD 60
MNAI+NKN D + C +YT+LFPC+EC K+I+Q+GI V Y D H + AS+RM
Sbjct: 9 MNAIMNKNQHDIRDCAIYTTLFPCHECTKLILQAGITCVYYASDSHHGTDSARASRRMLR 68
Query: 61 AAKVH 65
A VH
Sbjct: 69 LANVH 73
Score = 69.3 bits (168), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 29/51 (56%), Positives = 38/51 (74%)
Query: 153 MCHAEMNAILNKNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIYMCDKQ 203
+CHAEMNAI+NKN D + C +YT+LFPC+EC K+I+Q+GI V Y D
Sbjct: 4 VCHAEMNAIMNKNQHDIRDCAIYTTLFPCHECTKLILQAGITCVYYASDSH 54
>gi|257064835|ref|YP_003144507.1| deoxycytidylate deaminase [Slackia heliotrinireducens DSM 20476]
gi|256792488|gb|ACV23158.1| deoxycytidylate deaminase [Slackia heliotrinireducens DSM 20476]
Length = 156
Score = 73.9 bits (180), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 46/119 (38%), Positives = 61/119 (51%), Gaps = 12/119 (10%)
Query: 91 WHEYFMASAFLVAKRSKDPVTRVGAVIVNEDNKIVGTGYNGMP--------IGCSDDEFP 142
W EYFM AF V+KRS VGAVIV +D +I+ TGYNG+P GC +
Sbjct: 12 WDEYFMHLAFEVSKRSTCLRRAVGAVIV-KDRRILATGYNGVPSGLRHCDETGCLRQQLN 70
Query: 143 WDKNTHDEL-DMCHAEMNAILN--KNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIY 198
E+ HAE NAI+ + D +Y + PC C K++I +GI EV+Y
Sbjct: 71 VPSGQRHEICRGLHAEQNAIIQAARYGIDIAGSSIYITTQPCVVCTKMLINAGITEVVY 129
>gi|422859830|ref|ZP_16906474.1| cytidine and deoxycytidylate deaminase [Streptococcus sanguinis
SK330]
gi|327470713|gb|EGF16169.1| cytidine and deoxycytidylate deaminase [Streptococcus sanguinis
SK330]
Length = 155
Score = 73.9 bits (180), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 48/116 (41%), Positives = 62/116 (53%), Gaps = 9/116 (7%)
Query: 89 LEWHEYFMASAFLVAKRSKDPVTRVGAVIVNEDNKIVGTGYNGMPIG---CSDDE-FPWD 144
L W +YF A A L+A RS +VGAV+V +DNK++ TGYNG G C D E D
Sbjct: 6 LAWDQYFAAQALLIANRSTCKRAKVGAVLV-KDNKVISTGYNGSVSGTEHCIDHECLVID 64
Query: 145 KNTHDELDMCHAEMNAILNKNSADT-KRCKLYTSLFPCNECAKVIIQSGIKEVIYM 199
+ L HAE+NAIL K Y + FPC C K ++Q G K V+Y+
Sbjct: 65 GHCVRTL---HAEVNAILQGAERGVPKGFTAYVTHFPCLNCTKQLLQVGCKRVVYI 117
>gi|326803497|ref|YP_004321315.1| ComE operon protein 2 [Aerococcus urinae ACS-120-V-Col10a]
gi|326650126|gb|AEA00309.1| ComE operon protein 2 [Aerococcus urinae ACS-120-V-Col10a]
Length = 170
Score = 73.6 bits (179), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 46/118 (38%), Positives = 69/118 (58%), Gaps = 8/118 (6%)
Query: 89 LEWHEYFMASAFLVAKRSKDPVTRVGAVIVNEDNKIVGTGYNGMPIG---CSDDEFPWDK 145
+ W +YF++ A +++ RS VGAVIV DN+++ GYNG G CS+ + +
Sbjct: 4 IPWDQYFLSQALVLSMRSTCDRLMVGAVIV-RDNRVIAGGYNGSVSGETHCSEGG-CYLE 61
Query: 146 NTHDELDMCHAEMNAILN--KNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIYMCD 201
+ H + HAEMNAI+ K T+ ++Y + FPC C K IIQ+GIK+V Y+ D
Sbjct: 62 DGHC-VRTIHAEMNAIIQCAKFGVSTEGAEIYVTHFPCLPCTKQIIQAGIKKVSYLYD 118
Score = 45.4 bits (106), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 28/84 (33%), Positives = 40/84 (47%), Gaps = 10/84 (11%)
Query: 1 MNAILN--KNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIYMCDKHK--------QKP 50
MNAI+ K T+ ++Y + FPC C K IIQ+GIK+V Y+ D H QK
Sbjct: 73 MNAIIQCAKFGVSTEGAEIYVTHFPCLPCTKQIIQAGIKKVSYLYDYHNHPYALELYQKT 132
Query: 51 ATIASKRMFDAAKVHYWSEMDKMN 74
KR + H + + +N
Sbjct: 133 GVTVWKRQLEDDFFHQLHQQNLLN 156
>gi|254168071|ref|ZP_04874919.1| hypothetical protein ABOONEI_218 [Aciduliprofundum boonei T469]
gi|254168095|ref|ZP_04874942.1| hypothetical protein ABOONEI_712 [Aciduliprofundum boonei T469]
gi|289596025|ref|YP_003482721.1| CMP/dCMP deaminase zinc-binding protein [Aciduliprofundum boonei
T469]
gi|197622861|gb|EDY35429.1| hypothetical protein ABOONEI_712 [Aciduliprofundum boonei T469]
gi|197623114|gb|EDY35681.1| hypothetical protein ABOONEI_218 [Aciduliprofundum boonei T469]
gi|289533812|gb|ADD08159.1| CMP/dCMP deaminase zinc-binding protein [Aciduliprofundum boonei
T469]
Length = 161
Score = 73.6 bits (179), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 46/119 (38%), Positives = 62/119 (52%), Gaps = 12/119 (10%)
Query: 91 WHEYFMASAFLVAKRSKDPVTRVGAVIVNEDNKIVGTGYNGMP--------IGCSDDEFP 142
W EYFM A+L + RS +VGAVIV +D +I+ TGYNG P GC +E
Sbjct: 5 WDEYFMRMAYLASTRSTCTRRKVGAVIV-KDKRILATGYNGPPKGLAHCDVTGCIREELN 63
Query: 143 WDKNTHDEL-DMCHAEMNAILNK--NSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIY 198
EL HAE NAI+ + K +Y + PC CAK++I + IKE++Y
Sbjct: 64 VPSGERHELCRGLHAEQNAIIQAAVHGVSIKDATIYVTNHPCVVCAKMLINAEIKEIVY 122
>gi|254556952|ref|YP_003063369.1| dCMP deaminase [Lactobacillus plantarum JDM1]
gi|300768267|ref|ZP_07078172.1| competence protein ComEB [Lactobacillus plantarum subsp. plantarum
ATCC 14917]
gi|308180941|ref|YP_003925069.1| dCMP deaminase [Lactobacillus plantarum subsp. plantarum ST-III]
gi|418275682|ref|ZP_12891005.1| ComE operon protein 1, dCMP deaminase [Lactobacillus plantarum
subsp. plantarum NC8]
gi|448821654|ref|YP_007414816.1| ComE operon protein 1, dCMP deaminase [Lactobacillus plantarum
ZJ316]
gi|254045879|gb|ACT62672.1| dCMP deaminase [Lactobacillus plantarum JDM1]
gi|300494331|gb|EFK29494.1| competence protein ComEB [Lactobacillus plantarum subsp. plantarum
ATCC 14917]
gi|308046432|gb|ADN98975.1| dCMP deaminase [Lactobacillus plantarum subsp. plantarum ST-III]
gi|376009233|gb|EHS82562.1| ComE operon protein 1, dCMP deaminase [Lactobacillus plantarum
subsp. plantarum NC8]
gi|448275151|gb|AGE39670.1| ComE operon protein 1, dCMP deaminase [Lactobacillus plantarum
ZJ316]
Length = 162
Score = 73.6 bits (179), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 46/120 (38%), Positives = 67/120 (55%), Gaps = 10/120 (8%)
Query: 86 DDVLEWHEYFMASAFLVAKRSKDPVTRVGAVIVNEDNKIVGTGYNGMPIG---CSDDE-F 141
D + W +YFM A L+A RS VGA IV D +I+ GYNG G C D+ +
Sbjct: 4 DQRIPWDQYFMMQAVLLASRSTCERLSVGATIV-RDKRIIAGGYNGSVSGDVHCIDEGCY 62
Query: 142 PWDKNTHDELDMCHAEMNAILN--KNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIYM 199
D + + HAEMNAIL K A T ++Y + FPC +C K+++Q+GI+++ Y+
Sbjct: 63 LVDGHC---VRTIHAEMNAILQCAKFGAATDGAEIYVTDFPCLQCTKMLLQAGIQKIHYL 119
Score = 45.1 bits (105), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 47/78 (60%), Gaps = 4/78 (5%)
Query: 1 MNAILN--KNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIYMCDKHKQKPA-TIASKR 57
MNAIL K A T ++Y + FPC +C K+++Q+GI+++ Y+ + H A ++ ++
Sbjct: 76 MNAILQCAKFGAATDGAEIYVTDFPCLQCTKMLLQAGIQKIHYLRNYHNDAYAMSLIERK 135
Query: 58 MFDAAKVHY-WSEMDKMN 74
+V + S++DK+N
Sbjct: 136 HVALQQVQFDQSDLDKLN 153
>gi|422865165|ref|ZP_16911790.1| cytidine and deoxycytidylate deaminase [Streptococcus sanguinis
SK1058]
gi|327489897|gb|EGF21686.1| cytidine and deoxycytidylate deaminase [Streptococcus sanguinis
SK1058]
Length = 155
Score = 73.6 bits (179), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 48/116 (41%), Positives = 62/116 (53%), Gaps = 9/116 (7%)
Query: 89 LEWHEYFMASAFLVAKRSKDPVTRVGAVIVNEDNKIVGTGYNGMPIG---CSDDE-FPWD 144
L W +YF A A L+A RS +VGAV+V +DNK++ TGYNG G C D E D
Sbjct: 6 LAWDQYFAAQALLIANRSTCKRAKVGAVLV-KDNKVISTGYNGSVSGTEHCIDHECLVID 64
Query: 145 KNTHDELDMCHAEMNAILNKNSADT-KRCKLYTSLFPCNECAKVIIQSGIKEVIYM 199
+ L HAE+NAIL K Y + FPC C K ++Q G K V+Y+
Sbjct: 65 GHCVRTL---HAEVNAILQGAERGVPKGFTAYVTHFPCLNCTKQLLQVGCKRVVYI 117
>gi|325570545|ref|ZP_08146271.1| competence protein comEB [Enterococcus casseliflavus ATCC 12755]
gi|420264159|ref|ZP_14766792.1| competence protein comEB [Enterococcus sp. C1]
gi|325156391|gb|EGC68571.1| competence protein comEB [Enterococcus casseliflavus ATCC 12755]
gi|394768535|gb|EJF48441.1| competence protein comEB [Enterococcus sp. C1]
Length = 165
Score = 73.6 bits (179), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 45/119 (37%), Positives = 64/119 (53%), Gaps = 10/119 (8%)
Query: 89 LEWHEYFMASAFLVAKRSKDPVTRVGAVIVNEDNKIVGTGYNGMPIGCSDDEFPWDKNTH 148
+ W +YFMA A L++ RS VGA +V +D +I+ GYNG S D D +
Sbjct: 6 IPWDQYFMAQAVLLSLRSTCSRLEVGATLV-KDRRIIAGGYNG---SVSGDVHCIDDGCY 61
Query: 149 DELDMC----HAEMNAILN--KNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIYMCD 201
D C HAEMNA+L K T ++Y + FPC C K I+Q+G+K++ Y+ D
Sbjct: 62 VVDDHCIRTIHAEMNALLQCAKLGVSTDNAEIYVTHFPCLPCTKAILQAGVKKIHYLND 120
Score = 39.3 bits (90), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 18/46 (39%), Positives = 28/46 (60%), Gaps = 2/46 (4%)
Query: 1 MNAILN--KNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIYMCD 44
MNA+L K T ++Y + FPC C K I+Q+G+K++ Y+ D
Sbjct: 75 MNALLQCAKLGVSTDNAEIYVTHFPCLPCTKAILQAGVKKIHYLND 120
>gi|125718308|ref|YP_001035441.1| dCMP deaminase [Streptococcus sanguinis SK36]
gi|323351275|ref|ZP_08086931.1| cytidine and deoxycytidylate deaminase [Streptococcus sanguinis
VMC66]
gi|401681511|ref|ZP_10813411.1| putative ComE operon protein 2 [Streptococcus sp. AS14]
gi|422820940|ref|ZP_16869133.1| cytidine and deoxycytidylate deaminase [Streptococcus sanguinis
SK353]
gi|422823269|ref|ZP_16871457.1| cytidine and deoxycytidylate deaminase [Streptococcus sanguinis
SK405]
gi|422826644|ref|ZP_16874823.1| cytidine and deoxycytidylate deaminase [Streptococcus sanguinis
SK678]
gi|422847008|ref|ZP_16893691.1| cytidine and deoxycytidylate deaminase [Streptococcus sanguinis
SK72]
gi|422851325|ref|ZP_16897995.1| cytidine and deoxycytidylate deaminase [Streptococcus sanguinis
SK150]
gi|422854569|ref|ZP_16901233.1| cytidine and deoxycytidylate deaminase [Streptococcus sanguinis
SK160]
gi|422855204|ref|ZP_16901862.1| cytidine and deoxycytidylate deaminase [Streptococcus sanguinis
SK1]
gi|422862195|ref|ZP_16908827.1| cytidine and deoxycytidylate deaminase [Streptococcus sanguinis
SK408]
gi|422870605|ref|ZP_16917098.1| cytidine and deoxycytidylate deaminase [Streptococcus sanguinis
SK1087]
gi|422876079|ref|ZP_16922549.1| cytidine and deoxycytidylate deaminase [Streptococcus sanguinis
SK1056]
gi|422882580|ref|ZP_16929036.1| cytidine and deoxycytidylate deaminase [Streptococcus sanguinis
SK355]
gi|422883845|ref|ZP_16930294.1| cytidine and deoxycytidylate deaminase [Streptococcus sanguinis
SK49]
gi|125498225|gb|ABN44891.1| DCMP deaminase, putative [Streptococcus sanguinis SK36]
gi|322122499|gb|EFX94210.1| cytidine and deoxycytidylate deaminase [Streptococcus sanguinis
VMC66]
gi|324991558|gb|EGC23491.1| cytidine and deoxycytidylate deaminase [Streptococcus sanguinis
SK353]
gi|324993919|gb|EGC25838.1| cytidine and deoxycytidylate deaminase [Streptococcus sanguinis
SK405]
gi|324994762|gb|EGC26675.1| cytidine and deoxycytidylate deaminase [Streptococcus sanguinis
SK678]
gi|325687201|gb|EGD29223.1| cytidine and deoxycytidylate deaminase [Streptococcus sanguinis
SK72]
gi|325694913|gb|EGD36818.1| cytidine and deoxycytidylate deaminase [Streptococcus sanguinis
SK150]
gi|325696064|gb|EGD37955.1| cytidine and deoxycytidylate deaminase [Streptococcus sanguinis
SK160]
gi|327463181|gb|EGF09502.1| cytidine and deoxycytidylate deaminase [Streptococcus sanguinis
SK1]
gi|327474790|gb|EGF20195.1| cytidine and deoxycytidylate deaminase [Streptococcus sanguinis
SK408]
gi|328946547|gb|EGG40686.1| cytidine and deoxycytidylate deaminase [Streptococcus sanguinis
SK1087]
gi|332359448|gb|EGJ37268.1| cytidine and deoxycytidylate deaminase [Streptococcus sanguinis
SK355]
gi|332361943|gb|EGJ39745.1| cytidine and deoxycytidylate deaminase [Streptococcus sanguinis
SK49]
gi|332362515|gb|EGJ40315.1| cytidine and deoxycytidylate deaminase [Streptococcus sanguinis
SK1056]
gi|400186281|gb|EJO20494.1| putative ComE operon protein 2 [Streptococcus sp. AS14]
Length = 155
Score = 73.6 bits (179), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 48/116 (41%), Positives = 62/116 (53%), Gaps = 9/116 (7%)
Query: 89 LEWHEYFMASAFLVAKRSKDPVTRVGAVIVNEDNKIVGTGYNGMPIG---CSDDE-FPWD 144
L W +YF A A L+A RS +VGAV+V +DNK++ TGYNG G C D E D
Sbjct: 6 LAWDQYFAAQALLIANRSTCKRAKVGAVLV-KDNKVISTGYNGSVSGTEHCIDHECLVID 64
Query: 145 KNTHDELDMCHAEMNAILNKNSADT-KRCKLYTSLFPCNECAKVIIQSGIKEVIYM 199
+ L HAE+NAIL K Y + FPC C K ++Q G K V+Y+
Sbjct: 65 GHCVRTL---HAEVNAILQGAERGVPKGFTAYVTHFPCLNCTKQLLQVGCKRVVYI 117
>gi|134300992|ref|YP_001114488.1| CMP/dCMP deaminase [Desulfotomaculum reducens MI-1]
gi|134053692|gb|ABO51663.1| CMP/dCMP deaminase, zinc-binding protein [Desulfotomaculum reducens
MI-1]
Length = 147
Score = 73.6 bits (179), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 48/122 (39%), Positives = 65/122 (53%), Gaps = 12/122 (9%)
Query: 91 WHEYFMASAFLVAKRSKDPVTRVGAVIVNEDNKIVGTGYNGMP--------IGCSDDEFP 142
W EYFM +VA RS +VGAVIV +DN+I+ TGYNG P IGC ++
Sbjct: 5 WDEYFMEITRVVATRSTCLRRKVGAVIV-KDNRILATGYNGAPAGLTHCLEIGCLREKLG 63
Query: 143 WDKNTHDEL-DMCHAEMNAILNKNSADT--KRCKLYTSLFPCNECAKVIIQSGIKEVIYM 199
EL HAE NAI+ T + +Y + PC C+K+I+ +GIK+VI+
Sbjct: 64 VPSGQRHELCRALHAEQNAIIQAAVHGTAIQGSIIYVTDQPCVMCSKMIVNAGIKKVIFA 123
Query: 200 CD 201
D
Sbjct: 124 GD 125
>gi|392963336|ref|ZP_10328762.1| CMP/dCMP deaminase zinc-binding protein [Pelosinus fermentans DSM
17108]
gi|421056894|ref|ZP_15519811.1| CMP/dCMP deaminase zinc-binding protein [Pelosinus fermentans B4]
gi|421060199|ref|ZP_15522706.1| CMP/dCMP deaminase zinc-binding protein [Pelosinus fermentans B3]
gi|421066553|ref|ZP_15528144.1| CMP/dCMP deaminase zinc-binding protein [Pelosinus fermentans A12]
gi|421069285|ref|ZP_15530457.1| CMP/dCMP deaminase zinc-binding protein [Pelosinus fermentans A11]
gi|392438074|gb|EIW15936.1| CMP/dCMP deaminase zinc-binding protein [Pelosinus fermentans B4]
gi|392450305|gb|EIW27358.1| CMP/dCMP deaminase zinc-binding protein [Pelosinus fermentans A11]
gi|392451160|gb|EIW28154.1| CMP/dCMP deaminase zinc-binding protein [Pelosinus fermentans DSM
17108]
gi|392454930|gb|EIW31739.1| CMP/dCMP deaminase zinc-binding protein [Pelosinus fermentans A12]
gi|392457552|gb|EIW34200.1| CMP/dCMP deaminase zinc-binding protein [Pelosinus fermentans B3]
Length = 138
Score = 73.6 bits (179), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 49/112 (43%), Positives = 63/112 (56%), Gaps = 8/112 (7%)
Query: 91 WHEYFMASAFLVAKRSKDPVTRVGAVIVNEDNKIVGTGYNGMPIG---CSDDEFP-WDKN 146
W YF+ AF VA+RS +VGAVIV +D +I GTGYNG P G C DD D +
Sbjct: 5 WDLYFLDIAFQVAERSTCLRRQVGAVIV-KDKRIKGTGYNGSPAGLPHCIDDGCAMLDGH 63
Query: 147 THDELDMCHAEMNAILNKNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIY 198
+ HAE NA+L + + LY + PC EC K+II SGI +V+Y
Sbjct: 64 C---IRCIHAEPNALLECTPDERRGATLYCTDRPCPECQKLIITSGITKVVY 112
Score = 37.0 bits (84), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 17/40 (42%), Positives = 24/40 (60%)
Query: 2 NAILNKNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIY 41
NA+L + + LY + PC EC K+II SGI +V+Y
Sbjct: 73 NALLECTPDERRGATLYCTDRPCPECQKLIITSGITKVVY 112
>gi|366085923|ref|ZP_09452408.1| competence protein ComE [Lactobacillus zeae KCTC 3804]
Length = 154
Score = 73.6 bits (179), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 47/125 (37%), Positives = 65/125 (52%), Gaps = 6/125 (4%)
Query: 81 PHKRVDDVLEWHEYFMASAFLVAKRSKDPVTRVGAVIVNEDNKIVGTGYNGMPIG--CSD 138
P KR W YF+ A V++RS VGAV+V E ++I+ TGYNG G D
Sbjct: 7 PSKRKVHRESWDHYFLELAQQVSERSTCERATVGAVLVQE-HRIIATGYNGAISGDPHCD 65
Query: 139 DEFPWDKNTHDELDMCHAEMNAILN--KNSADTKRCKLYTSLFPCNECAKVIIQSGIKEV 196
+ ++ H + HAEMNAI+ N T +Y + FPC C K +IQ+GIK +
Sbjct: 66 EAGHLMRDGHC-IRTIHAEMNAIIQCAANGVSTHGATVYVNFFPCLNCTKALIQAGIKRI 124
Query: 197 IYMCD 201
+Y D
Sbjct: 125 VYAHD 129
Score = 43.1 bits (100), Expect = 0.067, Method: Compositional matrix adjust.
Identities = 19/46 (41%), Positives = 26/46 (56%), Gaps = 2/46 (4%)
Query: 1 MNAILN--KNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIYMCD 44
MNAI+ N T +Y + FPC C K +IQ+GIK ++Y D
Sbjct: 84 MNAIIQCAANGVSTHGATVYVNFFPCLNCTKALIQAGIKRIVYAHD 129
>gi|422858105|ref|ZP_16904755.1| cytidine and deoxycytidylate deaminase [Streptococcus sanguinis
SK1057]
gi|327461076|gb|EGF07409.1| cytidine and deoxycytidylate deaminase [Streptococcus sanguinis
SK1057]
Length = 155
Score = 73.6 bits (179), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 48/116 (41%), Positives = 62/116 (53%), Gaps = 9/116 (7%)
Query: 89 LEWHEYFMASAFLVAKRSKDPVTRVGAVIVNEDNKIVGTGYNGMPIG---CSDDE-FPWD 144
L W +YF A A L+A RS +VGAV+V +DNK++ TGYNG G C D E D
Sbjct: 6 LAWDQYFAAQALLIANRSTCKRAKVGAVLV-KDNKVISTGYNGSVSGTEHCIDHECLVID 64
Query: 145 KNTHDELDMCHAEMNAILNKNSADT-KRCKLYTSLFPCNECAKVIIQSGIKEVIYM 199
+ L HAE+NAIL K Y + FPC C K ++Q G K V+Y+
Sbjct: 65 GHCVRTL---HAEVNAILQGAERGVPKGFTAYVTHFPCLNCTKQLLQVGCKRVVYI 117
>gi|315282387|ref|ZP_07870809.1| ComE operon protein 2 [Listeria marthii FSL S4-120]
gi|313613969|gb|EFR87691.1| ComE operon protein 2 [Listeria marthii FSL S4-120]
Length = 186
Score = 73.6 bits (179), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 50/125 (40%), Positives = 68/125 (54%), Gaps = 11/125 (8%)
Query: 89 LEWHEYFMASAFLVAKRSKDPVTRVGAVIVNEDNKIVGTGYNGMPIG---CSDDE-FPWD 144
+ W ++FMA + L++ RS VGA IV D +I+ GYNG G C++ + D
Sbjct: 4 IAWDQFFMAQSHLISSRSTCTRLMVGATIV-RDKRIIAGGYNGSIAGGDHCAEHGCYVVD 62
Query: 145 KNTHDELDMCHAEMNAILN--KNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIYMCD- 201
+ + HAEMNAIL K A T +LY + FPC C K IIQ+GIK+V + D
Sbjct: 63 GHC---IRTIHAEMNAILQCAKFGATTDNAELYVTHFPCLACTKSIIQAGIKKVYFAKDY 119
Query: 202 KQMSY 206
K SY
Sbjct: 120 KNHSY 124
Score = 42.4 bits (98), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 23/46 (50%), Positives = 28/46 (60%), Gaps = 2/46 (4%)
Query: 1 MNAILN--KNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIYMCD 44
MNAIL K A T +LY + FPC C K IIQ+GIK+V + D
Sbjct: 73 MNAILQCAKFGATTDNAELYVTHFPCLACTKSIIQAGIKKVYFAKD 118
>gi|352517622|ref|YP_004886939.1| putative deoxycytidylate deaminase ComEB [Tetragenococcus
halophilus NBRC 12172]
gi|348601729|dbj|BAK94775.1| putative deoxycytidylate deaminase ComEB [Tetragenococcus
halophilus NBRC 12172]
Length = 162
Score = 73.6 bits (179), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 44/120 (36%), Positives = 64/120 (53%), Gaps = 10/120 (8%)
Query: 86 DDVLEWHEYFMASAFLVAKRSKDPVTRVGAVIVNEDNKIVGTGYNGMPIGCSDDEFPWDK 145
D + W +YFMA A L++ RS VGA +V +D +I+ GYNG S D+ D
Sbjct: 4 DKRIPWDQYFMAQALLLSLRSTCSRLEVGATLV-KDRRIIAGGYNG---SVSGDKHCIDH 59
Query: 146 NTHDELDMC----HAEMNAILN--KNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIYM 199
+ C HAEMNAIL K T ++Y + FPC +C K ++Q+G+K + Y+
Sbjct: 60 GCYLVDGHCIRTIHAEMNAILQCAKFGISTAGAEIYVTHFPCLQCTKALLQAGVKTIHYL 119
Score = 40.4 bits (93), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 19/53 (35%), Positives = 30/53 (56%), Gaps = 2/53 (3%)
Query: 1 MNAILN--KNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIYMCDKHKQKPA 51
MNAIL K T ++Y + FPC +C K ++Q+G+K + Y+ + H A
Sbjct: 76 MNAILQCAKFGISTAGAEIYVTHFPCLQCTKALLQAGVKTIHYLNNYHNDSYA 128
>gi|284047807|ref|YP_003398146.1| CMP/dCMP deaminase zinc-binding protein [Acidaminococcus fermentans
DSM 20731]
gi|283952028|gb|ADB46831.1| CMP/dCMP deaminase zinc-binding protein [Acidaminococcus fermentans
DSM 20731]
Length = 150
Score = 73.6 bits (179), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 45/121 (37%), Positives = 67/121 (55%), Gaps = 14/121 (11%)
Query: 90 EWHEYFMASAFLVAKRSKDPVTRVGAVIVNEDNKIVGTGYNGMP--------IGCSDDEF 141
+W YFM A +V+KRS +VGAV+V +D +I+ TGYNG P +GC ++
Sbjct: 5 DWDSYFMEIAEVVSKRSTCLRRKVGAVLV-KDRQILATGYNGTPKGLPHCEQVGCLREKL 63
Query: 142 --PWDKNTHDELDMCHAEMNAILNK--NSADTKRCKLYTSLFPCNECAKVIIQSGIKEVI 197
P +N H+ HAE NA++ N T LY + PC C+K++I +GIK ++
Sbjct: 64 HVPSGQN-HELCRGIHAEQNAVIQAAVNGVSTLGATLYCTHQPCVVCSKILINAGIKRIV 122
Query: 198 Y 198
Y
Sbjct: 123 Y 123
>gi|354558878|ref|ZP_08978131.1| CMP/dCMP deaminase zinc-binding [Desulfitobacterium metallireducens
DSM 15288]
gi|353545202|gb|EHC14654.1| CMP/dCMP deaminase zinc-binding [Desulfitobacterium metallireducens
DSM 15288]
Length = 158
Score = 73.6 bits (179), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 49/130 (37%), Positives = 68/130 (52%), Gaps = 16/130 (12%)
Query: 80 SPHKRVDDVLEWHEYFMASAFLVAKRSKDPVTRVGAVIVNEDNKIVGTGYNGMP------ 133
+P KR W +YFM A +V++RS +VGAVIV +D +I+ TGYNG P
Sbjct: 3 TPKKRPS----WDDYFMKMAQVVSERSTCLRRQVGAVIV-KDKQILSTGYNGSPTGLKHC 57
Query: 134 --IGCSDDEFPWDKNTHDEL-DMCHAEMNAILN--KNSADTKRCKLYTSLFPCNECAKVI 188
+GC + E+ HAE NA++ K+ + LYT+ PC C K+I
Sbjct: 58 AEVGCLRQKLQIPSGERTEICRAVHAEQNALVQAAKHGVEIDGAILYTTTQPCVLCTKMI 117
Query: 189 IQSGIKEVIY 198
I +GIK VIY
Sbjct: 118 INAGIKRVIY 127
>gi|159491366|ref|XP_001703639.1| predicted protein [Chlamydomonas reinhardtii]
gi|158270606|gb|EDO96446.1| predicted protein [Chlamydomonas reinhardtii]
Length = 61
Score = 73.6 bits (179), Expect = 4e-11, Method: Composition-based stats.
Identities = 33/50 (66%), Positives = 37/50 (74%)
Query: 96 MASAFLVAKRSKDPVTRVGAVIVNEDNKIVGTGYNGMPIGCSDDEFPWDK 145
MA AFL A+RSKDP +VGAVIVN DN I+G GYNG P GC D + PW K
Sbjct: 1 MALAFLSAERSKDPNKQVGAVIVNADNVILGIGYNGFPRGCCDSDLPWAK 50
>gi|404496483|ref|YP_006720589.1| deoxycytidylate deaminase [Geobacter metallireducens GS-15]
gi|418064789|ref|ZP_12702165.1| CMP/dCMP deaminase zinc-binding [Geobacter metallireducens RCH3]
gi|78194086|gb|ABB31853.1| deoxycytidylate deaminase [Geobacter metallireducens GS-15]
gi|373563062|gb|EHP89263.1| CMP/dCMP deaminase zinc-binding [Geobacter metallireducens RCH3]
Length = 154
Score = 73.6 bits (179), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 47/119 (39%), Positives = 62/119 (52%), Gaps = 12/119 (10%)
Query: 91 WHEYFMASAFLVAKRSKDPVTRVGAVIVNEDNKIVGTGYNGMP--------IGCSDDEFP 142
W EYFM LVAKRS +VGAVIV + N I+ TGYNG P +GC +
Sbjct: 6 WDEYFMEITHLVAKRSTCLRRQVGAVIVKDKN-ILATGYNGAPSGVAHCLEVGCLRAKLG 64
Query: 143 WDKNTHDEL-DMCHAEMNAILN--KNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIY 198
EL HAE NAI+ K+ + LY + PC C+K++I +GI+ V+Y
Sbjct: 65 IPSGERHELCRGLHAEQNAIIQAAKHGINIDGGTLYCTTMPCIICSKMLINAGIRRVVY 123
>gi|373859108|ref|ZP_09601840.1| ComE operon protein 2 [Bacillus sp. 1NLA3E]
gi|372451199|gb|EHP24678.1| ComE operon protein 2 [Bacillus sp. 1NLA3E]
Length = 186
Score = 73.6 bits (179), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 48/119 (40%), Positives = 63/119 (52%), Gaps = 10/119 (8%)
Query: 89 LEWHEYFMASAFLVAKRSKDPVTRVGAVIVNEDNKIVGTGYNGMPIGCSDDEFPWDKNTH 148
+ W+EYF+A + L+A RS VGA IV D +I+ GYNG G + DK +
Sbjct: 4 ISWNEYFLAQSHLLALRSTCTRLTVGATIV-RDKRIIAGGYNGSIAG---GDHCIDKGCY 59
Query: 149 DELDMC----HAEMNAILN--KNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIYMCD 201
+ C HAEMNA+L K T +Y + FPC +C K IIQ+GIK V Y D
Sbjct: 60 VIDNHCVRTIHAEMNALLQCAKFGVPTSGSDIYVTHFPCLQCCKAIIQAGIKTVYYAED 118
Score = 43.9 bits (102), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 27/67 (40%), Positives = 35/67 (52%), Gaps = 6/67 (8%)
Query: 1 MNAILN--KNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIYMCDKHKQKPATIASKRM 58
MNA+L K T +Y + FPC +C K IIQ+GIK V Y D +K P + +
Sbjct: 73 MNALLQCAKFGVPTSGSDIYVTHFPCLQCCKAIIQAGIKTVYYAED-YKNHPYAL---EL 128
Query: 59 FDAAKVH 65
F A VH
Sbjct: 129 FSTANVH 135
>gi|406997800|gb|EKE15817.1| hypothetical protein ACD_11C00103G0019 [uncultured bacterium]
Length = 190
Score = 73.6 bits (179), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 44/123 (35%), Positives = 69/123 (56%), Gaps = 15/123 (12%)
Query: 89 LEWHEYFMASAFLVAKRSKDPVTRVGAVIVNEDNKIVGTGYNG--------MPIGCSDDE 140
+ W E FM A +V+KR+ G+V V+++ +IV GYNG + +GC+ +
Sbjct: 12 MTWDETFMNLAIMVSKRAACKFHETGSVFVDKNKRIVSMGYNGPTEGDLHCVDVGCA--K 69
Query: 141 FPWDKNTHDELDMC---HAEMNAILN-KNSADTKRCKLYTSLFPCNECAKVIIQSGIKEV 196
D T +L C HAE+N I+N ++S + LY+ LFPC +C K + +GIKE+
Sbjct: 70 IDGDPQT-GKLKRCRGAHAEVNGIINAQDSTRLRGATLYSVLFPCYDCMKALNNAGIKEI 128
Query: 197 IYM 199
IY+
Sbjct: 129 IYL 131
Score = 41.2 bits (95), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 18/43 (41%), Positives = 29/43 (67%), Gaps = 1/43 (2%)
Query: 1 MNAILN-KNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIYM 42
+N I+N ++S + LY+ LFPC +C K + +GIKE+IY+
Sbjct: 89 VNGIINAQDSTRLRGATLYSVLFPCYDCMKALNNAGIKEIIYL 131
>gi|418093585|ref|ZP_12730714.1| cytidine and deoxycytidylate deaminase zinc-binding region family
protein [Streptococcus pneumoniae GA49138]
gi|353765461|gb|EHD46003.1| cytidine and deoxycytidylate deaminase zinc-binding region family
protein [Streptococcus pneumoniae GA49138]
Length = 155
Score = 73.6 bits (179), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 47/120 (39%), Positives = 63/120 (52%), Gaps = 7/120 (5%)
Query: 89 LEWHEYFMASAFLVAKRSKDPVTRVGAVIVNEDNKIVGTGYNGMPIG---CSDDEFPWDK 145
L W EYF A A L+A RS +VGA++V +DNK++ TGYNG G C D E +
Sbjct: 6 LAWDEYFAAQALLIANRSTCKRAKVGAILV-KDNKVISTGYNGSVSGTEHCIDHECLIIE 64
Query: 146 NTHDELDMCHAEMNAILNKNSADT-KRCKLYTSLFPCNECAKVIIQSGIKEVIYMCDKQM 204
+ HAE+NAIL K Y + FPC C K ++Q G K V+Y+ +M
Sbjct: 65 G--HCVRTLHAEVNAILQGAERGVPKGFTAYVTHFPCLNCTKQLLQVGCKRVVYINQYRM 122
>gi|297569251|ref|YP_003690595.1| CMP/dCMP deaminase zinc-binding protein [Desulfurivibrio
alkaliphilus AHT2]
gi|296925166|gb|ADH85976.1| CMP/dCMP deaminase zinc-binding protein [Desulfurivibrio
alkaliphilus AHT2]
Length = 158
Score = 73.6 bits (179), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 43/119 (36%), Positives = 63/119 (52%), Gaps = 12/119 (10%)
Query: 91 WHEYFMASAFLVAKRSKDPVTRVGAVIVNEDNKIVGTGYNGMP--------IGCSDDEFP 142
W EYFMA LVA+R+ +VGA++V D +IV TGYNG P +GC +E
Sbjct: 10 WEEYFMAITDLVAQRATCVRRKVGAILVR-DRRIVATGYNGAPSGIRHCLEVGCLREELA 68
Query: 143 WDKNTHDEL-DMCHAEMNAILNK--NSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIY 198
EL HAE NAI+ + + L+ + PC+ C+K++I +GI ++ Y
Sbjct: 69 VPSGERHELCRGLHAEQNAIIQAALHGVSLQSSMLFCTNMPCSICSKMLINAGITKIYY 127
>gi|431798320|ref|YP_007225224.1| deoxycytidylate deaminase [Echinicola vietnamensis DSM 17526]
gi|430789085|gb|AGA79214.1| deoxycytidylate deaminase [Echinicola vietnamensis DSM 17526]
Length = 186
Score = 73.6 bits (179), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 47/118 (39%), Positives = 64/118 (54%), Gaps = 9/118 (7%)
Query: 90 EWHEYFMASAFLVAKRSKDPVTRVGAVIVNEDNKIVGTGYNGMPIGCS--DDEFPWDKNT 147
++ + FM A +AKRS VGAV+ E +I+ GYNG P G D+EFP +
Sbjct: 31 DFDDIFMELAVNLAKRSHCIKKHVGAVLTKE-TRIISIGYNGPPSGTHNCDEEFPESGCS 89
Query: 148 HDELDMC----HAEMNAILN--KNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIYM 199
D C HAE NAIL KN+A + LY +L PC CA++I G+ +V+YM
Sbjct: 90 RDSKGSCSLAIHAEQNAILYAVKNNASVEGSTLYVTLAPCLACARIIYSMGVAKVVYM 147
Score = 39.3 bits (90), Expect = 0.99, Method: Compositional matrix adjust.
Identities = 19/43 (44%), Positives = 27/43 (62%), Gaps = 2/43 (4%)
Query: 2 NAILN--KNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIYM 42
NAIL KN+A + LY +L PC CA++I G+ +V+YM
Sbjct: 105 NAILYAVKNNASVEGSTLYVTLAPCLACARIIYSMGVAKVVYM 147
>gi|418967530|ref|ZP_13519193.1| putative ComE operon protein 2 [Streptococcus mitis SK616]
gi|383344143|gb|EID22313.1| putative ComE operon protein 2 [Streptococcus mitis SK616]
Length = 155
Score = 73.6 bits (179), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 47/123 (38%), Positives = 65/123 (52%), Gaps = 7/123 (5%)
Query: 86 DDVLEWHEYFMASAFLVAKRSKDPVTRVGAVIVNEDNKIVGTGYNGMPIG---CSDDEFP 142
++ L W EYF A A L+A RS +VGA++V +DNK++ TGYNG G C D E
Sbjct: 3 ENRLAWDEYFAAQALLIANRSTCKRAKVGAILV-KDNKVISTGYNGSVSGTEHCIDHECL 61
Query: 143 WDKNTHDELDMCHAEMNAILNKNSADT-KRCKLYTSLFPCNECAKVIIQSGIKEVIYMCD 201
+ + HAE+NAIL K Y + FPC C K ++Q G K V+Y+
Sbjct: 62 VIEG--HCVRTLHAEVNAILQGAERGVPKGFTAYVTHFPCLNCTKQLLQVGCKRVVYINQ 119
Query: 202 KQM 204
+M
Sbjct: 120 YRM 122
>gi|307708898|ref|ZP_07645358.1| comE operon protein 2 [Streptococcus mitis SK564]
gi|307620234|gb|EFN99350.1| comE operon protein 2 [Streptococcus mitis SK564]
Length = 155
Score = 73.6 bits (179), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 47/120 (39%), Positives = 63/120 (52%), Gaps = 7/120 (5%)
Query: 89 LEWHEYFMASAFLVAKRSKDPVTRVGAVIVNEDNKIVGTGYNGMPIG---CSDDEFPWDK 145
L W EYF A A L+A RS +VGA++V +DNK++ TGYNG G C D E +
Sbjct: 6 LAWDEYFAAQALLIANRSTCKRAKVGAILV-KDNKVISTGYNGSVSGTEHCIDHECLVIE 64
Query: 146 NTHDELDMCHAEMNAILNKNSADT-KRCKLYTSLFPCNECAKVIIQSGIKEVIYMCDKQM 204
+ HAE+NAIL K Y + FPC C K ++Q G K V+Y+ +M
Sbjct: 65 G--HCVRTLHAEVNAILQGAERGVPKGFTAYVTHFPCLNCTKQLLQVGCKRVVYINQYRM 122
>gi|441497997|ref|ZP_20980201.1| dCMP deaminase, putative [Fulvivirga imtechensis AK7]
gi|441438225|gb|ELR71565.1| dCMP deaminase, putative [Fulvivirga imtechensis AK7]
Length = 160
Score = 73.6 bits (179), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 46/118 (38%), Positives = 64/118 (54%), Gaps = 9/118 (7%)
Query: 90 EWHEYFMASAFLVAKRSKDPVTRVGAVIVNEDNKIVGTGYNGMPIGCS--DDEFPWDKNT 147
E+ + FM A +AKRS + VGAV+ +D +I+ GYNG P G D+E+P
Sbjct: 5 EFDDIFMELAVNLAKRSHCIMRHVGAVL-TKDTRIISIGYNGPPAGTHNCDEEWPEQGCP 63
Query: 148 HDELDMC----HAEMNAILN--KNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIYM 199
D C HAE NA+L KN + K LY +L PC CA++I G+ +VIY+
Sbjct: 64 RDSKGGCSLAIHAEQNALLYAVKNKTEVKGATLYVTLAPCLACARIIYTMGVSKVIYL 121
Score = 38.1 bits (87), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 18/43 (41%), Positives = 26/43 (60%), Gaps = 2/43 (4%)
Query: 2 NAILN--KNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIYM 42
NA+L KN + K LY +L PC CA++I G+ +VIY+
Sbjct: 79 NALLYAVKNKTEVKGATLYVTLAPCLACARIIYTMGVSKVIYL 121
>gi|15900639|ref|NP_345243.1| cytidine and deoxycytidylate deaminase [Streptococcus pneumoniae
TIGR4]
gi|15902698|ref|NP_358248.1| cytidine and deoxycytidylate deaminase [Streptococcus pneumoniae
R6]
gi|111657502|ref|ZP_01408246.1| hypothetical protein SpneT_02001292 [Streptococcus pneumoniae
TIGR4]
gi|116515918|ref|YP_816142.1| cytidine and deoxycytidylate deaminase family protein
[Streptococcus pneumoniae D39]
gi|148985317|ref|ZP_01818540.1| phosphomethylpyrimidine kinase [Streptococcus pneumoniae SP3-BS71]
gi|148989822|ref|ZP_01821116.1| phosphomethylpyrimidine kinase [Streptococcus pneumoniae SP6-BS73]
gi|148992405|ref|ZP_01822100.1| phosphomethylpyrimidine kinase [Streptococcus pneumoniae SP9-BS68]
gi|148997181|ref|ZP_01824835.1| cytidine and deoxycytidylate deaminase family protein
[Streptococcus pneumoniae SP11-BS70]
gi|149003356|ref|ZP_01828245.1| phosphomethylpyrimidine kinase [Streptococcus pneumoniae SP14-BS69]
gi|149007622|ref|ZP_01831239.1| cytidine and deoxycytidylate deaminase family protein
[Streptococcus pneumoniae SP18-BS74]
gi|149010633|ref|ZP_01832004.1| cytidine and deoxycytidylate deaminase family protein
[Streptococcus pneumoniae SP19-BS75]
gi|149020384|ref|ZP_01835276.1| phosphomethylpyrimidine kinase [Streptococcus pneumoniae SP23-BS72]
gi|168484853|ref|ZP_02709798.1| ComE operon protein 2 [Streptococcus pneumoniae CDC1873-00]
gi|168486764|ref|ZP_02711272.1| ComE operon protein 2 [Streptococcus pneumoniae CDC1087-00]
gi|168488412|ref|ZP_02712611.1| ComE operon protein 2 [Streptococcus pneumoniae SP195]
gi|168490831|ref|ZP_02714974.1| ComE operon protein 2 [Streptococcus pneumoniae CDC0288-04]
gi|168492893|ref|ZP_02717036.1| ComE operon protein 2 [Streptococcus pneumoniae CDC3059-06]
gi|168575403|ref|ZP_02721339.1| ComE operon protein 2 [Streptococcus pneumoniae MLV-016]
gi|169834471|ref|YP_001694207.1| ComE operon protein 2 [Streptococcus pneumoniae Hungary19A-6]
gi|182683664|ref|YP_001835411.1| cytidine and deoxycytidylate deaminase family protein
[Streptococcus pneumoniae CGSP14]
gi|194398250|ref|YP_002037390.1| cytidine and deoxycytidylate deaminase family protein
[Streptococcus pneumoniae G54]
gi|221231541|ref|YP_002510693.1| cytidine and deoxycytidylate deaminase [Streptococcus pneumoniae
ATCC 700669]
gi|225854253|ref|YP_002735765.1| ComE operon protein 2 [Streptococcus pneumoniae JJA]
gi|225856420|ref|YP_002737931.1| ComE operon protein 2 [Streptococcus pneumoniae P1031]
gi|225858555|ref|YP_002740065.1| ComE operon protein 2 [Streptococcus pneumoniae 70585]
gi|225860719|ref|YP_002742228.1| ComE operon protein 2 [Streptococcus pneumoniae Taiwan19F-14]
gi|237650412|ref|ZP_04524664.1| ComE operon protein 2 [Streptococcus pneumoniae CCRI 1974]
gi|237822476|ref|ZP_04598321.1| ComE operon protein 2 [Streptococcus pneumoniae CCRI 1974M2]
gi|298230044|ref|ZP_06963725.1| ComE operon protein 2 [Streptococcus pneumoniae str. Canada
MDR_19F]
gi|298255825|ref|ZP_06979411.1| ComE operon protein 2 [Streptococcus pneumoniae str. Canada
MDR_19A]
gi|298502530|ref|YP_003724470.1| competence protein ComEB [Streptococcus pneumoniae TCH8431/19A]
gi|303255840|ref|ZP_07341881.1| putative cytidine and deoxycytidylate deaminase [Streptococcus
pneumoniae BS455]
gi|303260007|ref|ZP_07345981.1| cytidine and deoxycytidylate deaminase family protein
[Streptococcus pneumoniae SP-BS293]
gi|303261413|ref|ZP_07347361.1| cytidine and deoxycytidylate deaminase family protein
[Streptococcus pneumoniae SP14-BS292]
gi|303264080|ref|ZP_07350001.1| cytidine and deoxycytidylate deaminase family protein
[Streptococcus pneumoniae BS397]
gi|303267618|ref|ZP_07353458.1| cytidine and deoxycytidylate deaminase family protein
[Streptococcus pneumoniae BS457]
gi|303269548|ref|ZP_07355312.1| cytidine and deoxycytidylate deaminase family protein
[Streptococcus pneumoniae BS458]
gi|307067348|ref|YP_003876314.1| deoxycytidylate deaminase [Streptococcus pneumoniae AP200]
gi|307127704|ref|YP_003879735.1| ComE operon protein 2 [Streptococcus pneumoniae 670-6B]
gi|342163417|ref|YP_004768056.1| deoxycytidylate deaminase [Streptococcus pseudopneumoniae IS7493]
gi|387626122|ref|YP_006062294.1| putative cytidine and deoxycytidylate deaminase [Streptococcus
pneumoniae INV104]
gi|387757173|ref|YP_006064152.1| putative cytidine and deoxycytidylate deaminase [Streptococcus
pneumoniae OXC141]
gi|387759003|ref|YP_006065981.1| putative cytidine and deoxycytidylate deaminase [Streptococcus
pneumoniae INV200]
gi|387787907|ref|YP_006252975.1| dCMP deaminase [Streptococcus pneumoniae ST556]
gi|405760913|ref|YP_006701509.1| cytidine and deoxycytidylate deaminase [Streptococcus pneumoniae
SPNA45]
gi|410476188|ref|YP_006742947.1| late competence protein ComEB [Streptococcus pneumoniae gamPNI0373]
gi|415697636|ref|ZP_11456866.1| comE operon protein 2 [Streptococcus pneumoniae 459-5]
gi|415749151|ref|ZP_11477095.1| comE operon protein 2 [Streptococcus pneumoniae SV35]
gi|415751833|ref|ZP_11478944.1| comE operon protein 2 [Streptococcus pneumoniae SV36]
gi|417312316|ref|ZP_12099030.1| putative deoxycytidylate deaminase [Streptococcus pneumoniae
GA04375]
gi|417676496|ref|ZP_12325909.1| putative deoxycytidylate deaminase [Streptococcus pneumoniae
GA17545]
gi|417678751|ref|ZP_12328148.1| putative deoxycytidylate deaminase [Streptococcus pneumoniae
GA17570]
gi|417686187|ref|ZP_12335465.1| putative deoxycytidylate deaminase [Streptococcus pneumoniae
GA41301]
gi|417693671|ref|ZP_12342860.1| putative deoxycytidylate deaminase [Streptococcus pneumoniae
GA47901]
gi|417695902|ref|ZP_12345082.1| putative deoxycytidylate deaminase [Streptococcus pneumoniae
GA47368]
gi|417698168|ref|ZP_12347341.1| putative deoxycytidylate deaminase [Streptococcus pneumoniae
GA41317]
gi|417848148|ref|ZP_12494100.1| putative ComE operon protein 2 [Streptococcus mitis SK1073]
gi|418074084|ref|ZP_12711340.1| putative deoxycytidylate deaminase [Streptococcus pneumoniae
GA11184]
gi|418075849|ref|ZP_12713089.1| cytidine and deoxycytidylate deaminase zinc-binding region family
protein [Streptococcus pneumoniae GA47502]
gi|418078235|ref|ZP_12715458.1| cytidine and deoxycytidylate deaminase zinc-binding region family
protein [Streptococcus pneumoniae 4027-06]
gi|418080187|ref|ZP_12717402.1| cytidine and deoxycytidylate deaminase zinc-binding region family
protein [Streptococcus pneumoniae 6735-05]
gi|418082621|ref|ZP_12719823.1| cytidine and deoxycytidylate deaminase zinc-binding region family
protein [Streptococcus pneumoniae GA44288]
gi|418084817|ref|ZP_12722003.1| cytidine and deoxycytidylate deaminase zinc-binding region family
protein [Streptococcus pneumoniae GA47281]
gi|418086483|ref|ZP_12723654.1| cytidine and deoxycytidylate deaminase zinc-binding region family
protein [Streptococcus pneumoniae GA47033]
gi|418089136|ref|ZP_12726294.1| cytidine and deoxycytidylate deaminase zinc-binding region family
protein [Streptococcus pneumoniae GA43265]
gi|418091359|ref|ZP_12728504.1| cytidine and deoxycytidylate deaminase zinc-binding region family
protein [Streptococcus pneumoniae GA44452]
gi|418098110|ref|ZP_12735210.1| cytidine and deoxycytidylate deaminase zinc-binding region family
protein [Streptococcus pneumoniae 6901-05]
gi|418100495|ref|ZP_12737583.1| cytidine and deoxycytidylate deaminase zinc-binding region family
protein [Streptococcus pneumoniae 7286-06]
gi|418102460|ref|ZP_12739536.1| cytidine and deoxycytidylate deaminase zinc-binding region family
protein [Streptococcus pneumoniae NP070]
gi|418104791|ref|ZP_12741851.1| cytidine and deoxycytidylate deaminase zinc-binding region family
protein [Streptococcus pneumoniae GA44500]
gi|418107124|ref|ZP_12744164.1| cytidine and deoxycytidylate deaminase zinc-binding region family
protein [Streptococcus pneumoniae GA41410]
gi|418109706|ref|ZP_12746735.1| cytidine and deoxycytidylate deaminase zinc-binding region family
protein [Streptococcus pneumoniae GA49447]
gi|418112091|ref|ZP_12749094.1| cytidine and deoxycytidylate deaminase zinc-binding region family
protein [Streptococcus pneumoniae GA41538]
gi|418114230|ref|ZP_12751221.1| cytidine and deoxycytidylate deaminase zinc-binding region family
protein [Streptococcus pneumoniae 5787-06]
gi|418116468|ref|ZP_12753442.1| cytidine and deoxycytidylate deaminase zinc-binding region family
protein [Streptococcus pneumoniae 6963-05]
gi|418118681|ref|ZP_12755639.1| cytidine and deoxycytidylate deaminase zinc-binding region family
protein [Streptococcus pneumoniae GA18523]
gi|418120822|ref|ZP_12757768.1| cytidine and deoxycytidylate deaminase zinc-binding region family
protein [Streptococcus pneumoniae GA44194]
gi|418123009|ref|ZP_12759944.1| cytidine and deoxycytidylate deaminase zinc-binding region family
protein [Streptococcus pneumoniae GA44378]
gi|418125348|ref|ZP_12762264.1| cytidine and deoxycytidylate deaminase zinc-binding region family
protein [Streptococcus pneumoniae GA44511]
gi|418127596|ref|ZP_12764492.1| cytidine and deoxycytidylate deaminase zinc-binding region family
protein [Streptococcus pneumoniae NP170]
gi|418129912|ref|ZP_12766796.1| cytidine and deoxycytidylate deaminase zinc-binding region family
protein [Streptococcus pneumoniae GA07643]
gi|418132586|ref|ZP_12769459.1| cytidine and deoxycytidylate deaminase zinc-binding region family
protein [Streptococcus pneumoniae GA11304]
gi|418134476|ref|ZP_12771334.1| cytidine and deoxycytidylate deaminase zinc-binding region family
protein [Streptococcus pneumoniae GA11426]
gi|418136766|ref|ZP_12773609.1| putative deoxycytidylate deaminase [Streptococcus pneumoniae
GA11663]
gi|418139059|ref|ZP_12775890.1| cytidine and deoxycytidylate deaminase zinc-binding region family
protein [Streptococcus pneumoniae GA13338]
gi|418141343|ref|ZP_12778156.1| putative deoxycytidylate deaminase [Streptococcus pneumoniae
GA13455]
gi|418143556|ref|ZP_12780356.1| putative deoxycytidylate deaminase [Streptococcus pneumoniae
GA13494]
gi|418145966|ref|ZP_12782750.1| putative deoxycytidylate deaminase [Streptococcus pneumoniae
GA13637]
gi|418148176|ref|ZP_12784941.1| putative deoxycytidylate deaminase [Streptococcus pneumoniae
GA13856]
gi|418150926|ref|ZP_12787673.1| putative deoxycytidylate deaminase [Streptococcus pneumoniae
GA14798]
gi|418152482|ref|ZP_12789222.1| putative deoxycytidylate deaminase [Streptococcus pneumoniae
GA16121]
gi|418154777|ref|ZP_12791508.1| putative deoxycytidylate deaminase [Streptococcus pneumoniae
GA16242]
gi|418157042|ref|ZP_12793758.1| putative deoxycytidylate deaminase [Streptococcus pneumoniae
GA16833]
gi|418161780|ref|ZP_12798471.1| putative deoxycytidylate deaminase [Streptococcus pneumoniae
GA17328]
gi|418164083|ref|ZP_12800757.1| putative deoxycytidylate deaminase [Streptococcus pneumoniae
GA17371]
gi|418166358|ref|ZP_12803014.1| putative deoxycytidylate deaminase [Streptococcus pneumoniae
GA17971]
gi|418168837|ref|ZP_12805483.1| putative deoxycytidylate deaminase [Streptococcus pneumoniae
GA19077]
gi|418170957|ref|ZP_12807584.1| putative deoxycytidylate deaminase [Streptococcus pneumoniae
GA19451]
gi|418173105|ref|ZP_12809719.1| putative deoxycytidylate deaminase [Streptococcus pneumoniae
GA41277]
gi|418175548|ref|ZP_12812146.1| putative deoxycytidylate deaminase [Streptococcus pneumoniae
GA41437]
gi|418177767|ref|ZP_12814351.1| putative deoxycytidylate deaminase [Streptococcus pneumoniae
GA41565]
gi|418180099|ref|ZP_12816672.1| putative deoxycytidylate deaminase [Streptococcus pneumoniae
GA41688]
gi|418182340|ref|ZP_12818901.1| putative deoxycytidylate deaminase [Streptococcus pneumoniae
GA43380]
gi|418186752|ref|ZP_12823282.1| cytidine and deoxycytidylate deaminase zinc-binding region family
protein [Streptococcus pneumoniae GA47360]
gi|418188971|ref|ZP_12825486.1| cytidine and deoxycytidylate deaminase zinc-binding region family
protein [Streptococcus pneumoniae GA47373]
gi|418191291|ref|ZP_12827795.1| cytidine and deoxycytidylate deaminase zinc-binding region family
protein [Streptococcus pneumoniae GA47388]
gi|418193382|ref|ZP_12829875.1| cytidine and deoxycytidylate deaminase zinc-binding region family
protein [Streptococcus pneumoniae GA47439]
gi|418195672|ref|ZP_12832152.1| putative deoxycytidylate deaminase [Streptococcus pneumoniae
GA47688]
gi|418198274|ref|ZP_12834734.1| putative deoxycytidylate deaminase [Streptococcus pneumoniae
GA47778]
gi|418199664|ref|ZP_12836111.1| cytidine and deoxycytidylate deaminase zinc-binding region family
protein [Streptococcus pneumoniae GA47976]
gi|418202021|ref|ZP_12838451.1| putative deoxycytidylate deaminase [Streptococcus pneumoniae
GA52306]
gi|418213914|ref|ZP_12840649.1| cytidine and deoxycytidylate deaminase zinc-binding region family
protein [Streptococcus pneumoniae GA54644]
gi|418216193|ref|ZP_12842917.1| putative deoxycytidylate deaminase [Streptococcus pneumoniae
Netherlands15B-37]
gi|418218482|ref|ZP_12845150.1| cytidine and deoxycytidylate deaminase zinc-binding region family
protein [Streptococcus pneumoniae NP127]
gi|418220666|ref|ZP_12847322.1| cytidine and deoxycytidylate deaminase zinc-binding region family
protein [Streptococcus pneumoniae GA47751]
gi|418223015|ref|ZP_12849660.1| cytidine and deoxycytidylate deaminase zinc-binding region family
protein [Streptococcus pneumoniae 5185-06]
gi|418225169|ref|ZP_12851798.1| cytidine and deoxycytidylate deaminase zinc-binding region family
protein [Streptococcus pneumoniae NP112]
gi|418227334|ref|ZP_12853953.1| cytidine and deoxycytidylate deaminase zinc-binding region family
protein [Streptococcus pneumoniae 3063-00]
gi|418229484|ref|ZP_12856091.1| cytidine and deoxycytidylate deaminase zinc-binding region family
protein [Streptococcus pneumoniae EU-NP01]
gi|418231812|ref|ZP_12858400.1| cytidine and deoxycytidylate deaminase zinc-binding region family
protein [Streptococcus pneumoniae GA07228]
gi|418233936|ref|ZP_12860516.1| cytidine and deoxycytidylate deaminase zinc-binding region family
protein [Streptococcus pneumoniae GA08780]
gi|418236111|ref|ZP_12862680.1| cytidine and deoxycytidylate deaminase zinc-binding region family
protein [Streptococcus pneumoniae GA19690]
gi|418238316|ref|ZP_12864872.1| cytidine and deoxycytidylate deaminase zinc-binding region family
protein [Streptococcus pneumoniae NorthCarolina6A-23]
gi|419422350|ref|ZP_13962569.1| cytidine and deoxycytidylate deaminase zinc-binding region family
protein [Streptococcus pneumoniae GA43264]
gi|419424776|ref|ZP_13964976.1| cytidine and deoxycytidylate deaminase zinc-binding region family
protein [Streptococcus pneumoniae 7533-05]
gi|419426901|ref|ZP_13967084.1| cytidine and deoxycytidylate deaminase zinc-binding region family
protein [Streptococcus pneumoniae 5652-06]
gi|419429002|ref|ZP_13969171.1| cytidine and deoxycytidylate deaminase zinc-binding region family
protein [Streptococcus pneumoniae GA11856]
gi|419431143|ref|ZP_13971289.1| cytidine and deoxycytidylate deaminase zinc-binding region family
protein [Streptococcus pneumoniae EU-NP05]
gi|419433402|ref|ZP_13973521.1| cytidine and deoxycytidylate deaminase zinc-binding region family
protein [Streptococcus pneumoniae GA40183]
gi|419435620|ref|ZP_13975715.1| cytidine and deoxycytidylate deaminase zinc-binding region family
protein [Streptococcus pneumoniae 8190-05]
gi|419437702|ref|ZP_13977774.1| cytidine and deoxycytidylate deaminase zinc-binding region family
protein [Streptococcus pneumoniae GA13499]
gi|419439954|ref|ZP_13980008.1| cytidine and deoxycytidylate deaminase zinc-binding region family
protein [Streptococcus pneumoniae GA40410]
gi|419442235|ref|ZP_13982266.1| cytidine and deoxycytidylate deaminase zinc-binding region family
protein [Streptococcus pneumoniae GA13224]
gi|419444356|ref|ZP_13984371.1| cytidine and deoxycytidylate deaminase zinc-binding region family
protein [Streptococcus pneumoniae GA19923]
gi|419446483|ref|ZP_13986488.1| cytidine and deoxycytidylate deaminase zinc-binding region family
protein [Streptococcus pneumoniae 7879-04]
gi|419449067|ref|ZP_13989064.1| cytidine and deoxycytidylate deaminase zinc-binding region family
protein [Streptococcus pneumoniae 4075-00]
gi|419450719|ref|ZP_13990706.1| cytidine and deoxycytidylate deaminase zinc-binding region family
protein [Streptococcus pneumoniae EU-NP02]
gi|419452707|ref|ZP_13992681.1| cytidine and deoxycytidylate deaminase zinc-binding region family
protein [Streptococcus pneumoniae EU-NP03]
gi|419457117|ref|ZP_13997063.1| cytidine and deoxycytidylate deaminase zinc-binding region family
protein [Streptococcus pneumoniae GA02254]
gi|419459590|ref|ZP_13999526.1| cytidine and deoxycytidylate deaminase zinc-binding region family
protein [Streptococcus pneumoniae GA02270]
gi|419461870|ref|ZP_14001786.1| cytidine and deoxycytidylate deaminase zinc-binding region family
protein [Streptococcus pneumoniae GA02714]
gi|419463993|ref|ZP_14003886.1| cytidine and deoxycytidylate deaminase zinc-binding region family
protein [Streptococcus pneumoniae GA04175]
gi|419466714|ref|ZP_14006597.1| cytidine and deoxycytidylate deaminase zinc-binding region family
protein [Streptococcus pneumoniae GA05248]
gi|419468616|ref|ZP_14008487.1| cytidine and deoxycytidylate deaminase zinc-binding region family
protein [Streptococcus pneumoniae GA06083]
gi|419470707|ref|ZP_14010566.1| cytidine and deoxycytidylate deaminase zinc-binding region family
protein [Streptococcus pneumoniae GA07914]
gi|419472799|ref|ZP_14012650.1| cytidine and deoxycytidylate deaminase zinc-binding region family
protein [Streptococcus pneumoniae GA13430]
gi|419475137|ref|ZP_14014978.1| cytidine and deoxycytidylate deaminase zinc-binding region family
protein [Streptococcus pneumoniae GA14688]
gi|419477410|ref|ZP_14017235.1| cytidine and deoxycytidylate deaminase zinc-binding region family
protein [Streptococcus pneumoniae GA18068]
gi|419479581|ref|ZP_14019389.1| cytidine and deoxycytidylate deaminase zinc-binding region family
protein [Streptococcus pneumoniae GA19101]
gi|419484390|ref|ZP_14024166.1| cytidine and deoxycytidylate deaminase zinc-binding region family
protein [Streptococcus pneumoniae GA43257]
gi|419486247|ref|ZP_14026014.1| cytidine and deoxycytidylate deaminase zinc-binding region family
protein [Streptococcus pneumoniae GA44128]
gi|419488313|ref|ZP_14028066.1| cytidine and deoxycytidylate deaminase zinc-binding region family
protein [Streptococcus pneumoniae GA44386]
gi|419490674|ref|ZP_14030414.1| cytidine and deoxycytidylate deaminase zinc-binding region family
protein [Streptococcus pneumoniae GA47179]
gi|419492892|ref|ZP_14032619.1| cytidine and deoxycytidylate deaminase zinc-binding region family
protein [Streptococcus pneumoniae GA47210]
gi|419495040|ref|ZP_14034760.1| cytidine and deoxycytidylate deaminase zinc-binding region family
protein [Streptococcus pneumoniae GA47461]
gi|419496924|ref|ZP_14036635.1| cytidine and deoxycytidylate deaminase zinc-binding region family
protein [Streptococcus pneumoniae GA47522]
gi|419499274|ref|ZP_14038973.1| cytidine and deoxycytidylate deaminase zinc-binding region family
protein [Streptococcus pneumoniae GA47597]
gi|419501484|ref|ZP_14041170.1| cytidine and deoxycytidylate deaminase zinc-binding region family
protein [Streptococcus pneumoniae GA47628]
gi|419503556|ref|ZP_14043227.1| cytidine and deoxycytidylate deaminase zinc-binding region family
protein [Streptococcus pneumoniae GA47760]
gi|419505688|ref|ZP_14045349.1| cytidine and deoxycytidylate deaminase zinc-binding region family
protein [Streptococcus pneumoniae GA49194]
gi|419507810|ref|ZP_14047464.1| cytidine and deoxycytidylate deaminase zinc-binding region family
protein [Streptococcus pneumoniae GA49542]
gi|419510094|ref|ZP_14049738.1| cytidine and deoxycytidylate deaminase zinc-binding region family
protein [Streptococcus pneumoniae NP141]
gi|419512141|ref|ZP_14051775.1| cytidine and deoxycytidylate deaminase zinc-binding region family
protein [Streptococcus pneumoniae GA05578]
gi|419514301|ref|ZP_14053929.1| cytidine and deoxycytidylate deaminase zinc-binding region family
protein [Streptococcus pneumoniae England14-9]
gi|419516425|ref|ZP_14056043.1| cytidine and deoxycytidylate deaminase zinc-binding region family
protein [Streptococcus pneumoniae GA02506]
gi|419518549|ref|ZP_14058156.1| cytidine and deoxycytidylate deaminase zinc-binding region family
protein [Streptococcus pneumoniae GA08825]
gi|419520684|ref|ZP_14060281.1| cytidine and deoxycytidylate deaminase zinc-binding region family
protein [Streptococcus pneumoniae GA05245]
gi|419523009|ref|ZP_14062590.1| cytidine and deoxycytidylate deaminase zinc-binding region family
protein [Streptococcus pneumoniae GA13723]
gi|419525488|ref|ZP_14065053.1| cytidine and deoxycytidylate deaminase zinc-binding region family
protein [Streptococcus pneumoniae GA14373]
gi|419527581|ref|ZP_14067125.1| cytidine and deoxycytidylate deaminase zinc-binding region family
protein [Streptococcus pneumoniae GA17719]
gi|419529993|ref|ZP_14069524.1| cytidine and deoxycytidylate deaminase zinc-binding region family
protein [Streptococcus pneumoniae GA40028]
gi|419531982|ref|ZP_14071500.1| cytidine and deoxycytidylate deaminase zinc-binding region family
protein [Streptococcus pneumoniae GA47794]
gi|419534185|ref|ZP_14073691.1| cytidine and deoxycytidylate deaminase zinc-binding region family
protein [Streptococcus pneumoniae GA17457]
gi|421206190|ref|ZP_15663254.1| comE operon protein 2 [Streptococcus pneumoniae 2090008]
gi|421208575|ref|ZP_15665600.1| comE operon protein 2 [Streptococcus pneumoniae 2070005]
gi|421210697|ref|ZP_15667685.1| comE operon protein 2 [Streptococcus pneumoniae 2070035]
gi|421212745|ref|ZP_15669707.1| comE operon protein 2 [Streptococcus pneumoniae 2070108]
gi|421214933|ref|ZP_15671864.1| comE operon protein 2 [Streptococcus pneumoniae 2070109]
gi|421217238|ref|ZP_15674139.1| comE operon protein 2 [Streptococcus pneumoniae 2070335]
gi|421219929|ref|ZP_15676784.1| comE operon protein 2 [Streptococcus pneumoniae 2070425]
gi|421222260|ref|ZP_15679054.1| comE operon protein 2 [Streptococcus pneumoniae 2070531]
gi|421224598|ref|ZP_15681344.1| comE operon protein 2 [Streptococcus pneumoniae 2070768]
gi|421226917|ref|ZP_15683631.1| comE operon protein 2 [Streptococcus pneumoniae 2072047]
gi|421229391|ref|ZP_15686067.1| comE operon protein 2 [Streptococcus pneumoniae 2061376]
gi|421231511|ref|ZP_15688158.1| comE operon protein 2 [Streptococcus pneumoniae 2080076]
gi|421233744|ref|ZP_15690366.1| comE operon protein 2 [Streptococcus pneumoniae 2061617]
gi|421235902|ref|ZP_15692503.1| comE operon protein 2 [Streptococcus pneumoniae 2071004]
gi|421238380|ref|ZP_15694949.1| comE operon protein 2 [Streptococcus pneumoniae 2071247]
gi|421240309|ref|ZP_15696857.1| comE operon protein 2 [Streptococcus pneumoniae 2080913]
gi|421242737|ref|ZP_15699259.1| comE operon protein 2 [Streptococcus pneumoniae 2081074]
gi|421244574|ref|ZP_15701077.1| comE operon protein 2 [Streptococcus pneumoniae 2081685]
gi|421246999|ref|ZP_15703486.1| comE operon protein 2 [Streptococcus pneumoniae 2082170]
gi|421249048|ref|ZP_15705511.1| comE operon protein 2 [Streptococcus pneumoniae 2082239]
gi|421265775|ref|ZP_15716658.1| cytidine and deoxycytidylate deaminase zinc-binding region family
protein [Streptococcus pneumoniae SPAR27]
gi|421267949|ref|ZP_15718821.1| cytidine and deoxycytidylate deaminase zinc-binding region family
protein [Streptococcus pneumoniae SPAR95]
gi|421270168|ref|ZP_15721025.1| cytidine and deoxycytidylate deaminase zinc-binding region family
protein [Streptococcus pneumoniae SPAR48]
gi|421272387|ref|ZP_15723234.1| cytidine and deoxycytidylate deaminase zinc-binding region family
protein [Streptococcus pneumoniae SPAR55]
gi|421278510|ref|ZP_15729320.1| cytidine and deoxycytidylate deaminase zinc-binding region family
protein [Streptococcus pneumoniae GA17301]
gi|421280726|ref|ZP_15731525.1| cytidine and deoxycytidylate deaminase family protein
[Streptococcus pneumoniae GA04672]
gi|421282932|ref|ZP_15733721.1| cytidine and deoxycytidylate deaminase family protein
[Streptococcus pneumoniae GA04216]
gi|421285354|ref|ZP_15736131.1| cytidine and deoxycytidylate deaminase family protein
[Streptococcus pneumoniae GA60190]
gi|421287232|ref|ZP_15737998.1| cytidine and deoxycytidylate deaminase family protein
[Streptococcus pneumoniae GA58771]
gi|421289387|ref|ZP_15740139.1| cytidine and deoxycytidylate deaminase family protein
[Streptococcus pneumoniae GA54354]
gi|421291549|ref|ZP_15742289.1| cytidine and deoxycytidylate deaminase family protein
[Streptococcus pneumoniae GA56348]
gi|421293756|ref|ZP_15744480.1| cytidine and deoxycytidylate deaminase family protein
[Streptococcus pneumoniae GA56113]
gi|421297350|ref|ZP_15748053.1| cytidine and deoxycytidylate deaminase family protein
[Streptococcus pneumoniae GA58581]
gi|421298212|ref|ZP_15748901.1| cytidine and deoxycytidylate deaminase family protein
[Streptococcus pneumoniae GA60080]
gi|421300597|ref|ZP_15751268.1| cytidine and deoxycytidylate deaminase family protein
[Streptococcus pneumoniae GA19998]
gi|421302555|ref|ZP_15753220.1| cytidine and deoxycytidylate deaminase family protein
[Streptococcus pneumoniae GA17484]
gi|421304707|ref|ZP_15755363.1| cytidine and deoxycytidylate deaminase family protein
[Streptococcus pneumoniae GA62331]
gi|421306929|ref|ZP_15757575.1| cytidine and deoxycytidylate deaminase family protein
[Streptococcus pneumoniae GA60132]
gi|421309173|ref|ZP_15759802.1| cytidine and deoxycytidylate deaminase family protein
[Streptococcus pneumoniae GA62681]
gi|421311492|ref|ZP_15762099.1| cytidine and deoxycytidylate deaminase family protein
[Streptococcus pneumoniae GA58981]
gi|421313920|ref|ZP_15764510.1| cytidine and deoxycytidylate deaminase family protein
[Streptococcus pneumoniae GA47562]
gi|444383937|ref|ZP_21182110.1| putative ComE operon protein 2 [Streptococcus pneumoniae PCS8106]
gi|444385500|ref|ZP_21183573.1| putative ComE operon protein 2 [Streptococcus pneumoniae PCS8203]
gi|444387435|ref|ZP_21185457.1| putative ComE operon protein 2 [Streptococcus pneumoniae PCS125219]
gi|444390135|ref|ZP_21188050.1| putative ComE operon protein 2 [Streptococcus pneumoniae PCS70012]
gi|444391762|ref|ZP_21189568.1| putative ComE operon protein 2 [Streptococcus pneumoniae PCS81218]
gi|444394232|ref|ZP_21191785.1| putative ComE operon protein 2 [Streptococcus pneumoniae PNI0002]
gi|444397183|ref|ZP_21194670.1| putative ComE operon protein 2 [Streptococcus pneumoniae PNI0006]
gi|444400791|ref|ZP_21198160.1| putative ComE operon protein 2 [Streptococcus pneumoniae PNI0007]
gi|444401576|ref|ZP_21198760.1| putative ComE operon protein 2 [Streptococcus pneumoniae PNI0008]
gi|444406011|ref|ZP_21202839.1| putative ComE operon protein 2 [Streptococcus pneumoniae PNI0009]
gi|444408858|ref|ZP_21205488.1| putative ComE operon protein 2 [Streptococcus pneumoniae PNI0010]
gi|444410172|ref|ZP_21206720.1| putative ComE operon protein 2 [Streptococcus pneumoniae PNI0076]
gi|444411919|ref|ZP_21208245.1| putative ComE operon protein 2 [Streptococcus pneumoniae PNI0153]
gi|444415024|ref|ZP_21211271.1| putative ComE operon protein 2 [Streptococcus pneumoniae PNI0199]
gi|444416759|ref|ZP_21212838.1| putative ComE operon protein 2 [Streptococcus pneumoniae PNI0360]
gi|444419296|ref|ZP_21215169.1| putative ComE operon protein 2 [Streptococcus pneumoniae PNI0427]
gi|444423189|ref|ZP_21218810.1| putative ComE operon protein 2 [Streptococcus pneumoniae PNI0446]
gi|14972218|gb|AAK74883.1| cytidine and deoxycytidylate deaminase family protein
[Streptococcus pneumoniae TIGR4]
gi|15458240|gb|AAK99458.1| dCMP deaminase [Streptococcus pneumoniae R6]
gi|116076494|gb|ABJ54214.1| cytidine and deoxycytidylate deaminase family protein
[Streptococcus pneumoniae D39]
gi|147756881|gb|EDK63921.1| cytidine and deoxycytidylate deaminase family protein
[Streptococcus pneumoniae SP11-BS70]
gi|147758539|gb|EDK65537.1| phosphomethylpyrimidine kinase [Streptococcus pneumoniae SP14-BS69]
gi|147760777|gb|EDK67748.1| cytidine and deoxycytidylate deaminase family protein
[Streptococcus pneumoniae SP18-BS74]
gi|147765114|gb|EDK72043.1| cytidine and deoxycytidylate deaminase family protein
[Streptococcus pneumoniae SP19-BS75]
gi|147922515|gb|EDK73634.1| phosphomethylpyrimidine kinase [Streptococcus pneumoniae SP3-BS71]
gi|147924764|gb|EDK75848.1| phosphomethylpyrimidine kinase [Streptococcus pneumoniae SP6-BS73]
gi|147928722|gb|EDK79735.1| phosphomethylpyrimidine kinase [Streptococcus pneumoniae SP9-BS68]
gi|147930686|gb|EDK81668.1| phosphomethylpyrimidine kinase [Streptococcus pneumoniae SP23-BS72]
gi|168996973|gb|ACA37585.1| ComE operon protein 2 [Streptococcus pneumoniae Hungary19A-6]
gi|172042006|gb|EDT50052.1| ComE operon protein 2 [Streptococcus pneumoniae CDC1873-00]
gi|182628998|gb|ACB89946.1| cytidine and deoxycytidylate deaminase family protein
[Streptococcus pneumoniae CGSP14]
gi|183570286|gb|EDT90814.1| ComE operon protein 2 [Streptococcus pneumoniae CDC1087-00]
gi|183573165|gb|EDT93693.1| ComE operon protein 2 [Streptococcus pneumoniae SP195]
gi|183574679|gb|EDT95207.1| ComE operon protein 2 [Streptococcus pneumoniae CDC0288-04]
gi|183576942|gb|EDT97470.1| ComE operon protein 2 [Streptococcus pneumoniae CDC3059-06]
gi|183578400|gb|EDT98928.1| ComE operon protein 2 [Streptococcus pneumoniae MLV-016]
gi|194357917|gb|ACF56365.1| cytidine and deoxycytidylate deaminase family protein
[Streptococcus pneumoniae G54]
gi|220674001|emb|CAR68514.1| putative cytidine and deoxycytidylate deaminase [Streptococcus
pneumoniae ATCC 700669]
gi|225720156|gb|ACO16010.1| ComE operon protein 2 [Streptococcus pneumoniae 70585]
gi|225723766|gb|ACO19619.1| ComE operon protein 2 [Streptococcus pneumoniae JJA]
gi|225725327|gb|ACO21179.1| ComE operon protein 2 [Streptococcus pneumoniae P1031]
gi|225727835|gb|ACO23686.1| ComE operon protein 2 [Streptococcus pneumoniae Taiwan19F-14]
gi|298238125|gb|ADI69256.1| possible competence protein ComEB [Streptococcus pneumoniae
TCH8431/19A]
gi|301793904|emb|CBW36300.1| putative cytidine and deoxycytidylate deaminase [Streptococcus
pneumoniae INV104]
gi|301799762|emb|CBW32331.1| putative cytidine and deoxycytidylate deaminase [Streptococcus
pneumoniae OXC141]
gi|301801592|emb|CBW34290.1| putative cytidine and deoxycytidylate deaminase [Streptococcus
pneumoniae INV200]
gi|302597224|gb|EFL64329.1| putative cytidine and deoxycytidylate deaminase [Streptococcus
pneumoniae BS455]
gi|302637547|gb|EFL68034.1| cytidine and deoxycytidylate deaminase family protein
[Streptococcus pneumoniae SP14-BS292]
gi|302638926|gb|EFL69387.1| cytidine and deoxycytidylate deaminase family protein
[Streptococcus pneumoniae SP-BS293]
gi|302640933|gb|EFL71316.1| cytidine and deoxycytidylate deaminase family protein
[Streptococcus pneumoniae BS458]
gi|302642848|gb|EFL73155.1| cytidine and deoxycytidylate deaminase family protein
[Streptococcus pneumoniae BS457]
gi|302646485|gb|EFL76711.1| cytidine and deoxycytidylate deaminase family protein
[Streptococcus pneumoniae BS397]
gi|306408885|gb|ADM84312.1| Deoxycytidylate deaminase [Streptococcus pneumoniae AP200]
gi|306484766|gb|ADM91635.1| ComE operon protein 2 [Streptococcus pneumoniae 670-6B]
gi|327390102|gb|EGE88445.1| putative deoxycytidylate deaminase [Streptococcus pneumoniae
GA04375]
gi|332073130|gb|EGI83609.1| putative deoxycytidylate deaminase [Streptococcus pneumoniae
GA17570]
gi|332076024|gb|EGI86490.1| putative deoxycytidylate deaminase [Streptococcus pneumoniae
GA41301]
gi|332077161|gb|EGI87623.1| putative deoxycytidylate deaminase [Streptococcus pneumoniae
GA17545]
gi|332202609|gb|EGJ16678.1| putative deoxycytidylate deaminase [Streptococcus pneumoniae
GA41317]
gi|332203899|gb|EGJ17966.1| putative deoxycytidylate deaminase [Streptococcus pneumoniae
GA47368]
gi|332204754|gb|EGJ18819.1| putative deoxycytidylate deaminase [Streptococcus pneumoniae
GA47901]
gi|339455173|gb|EGP67781.1| putative ComE operon protein 2 [Streptococcus mitis SK1073]
gi|341933299|gb|AEL10196.1| deoxycytidylate deaminase [Streptococcus pseudopneumoniae IS7493]
gi|353747426|gb|EHD28082.1| cytidine and deoxycytidylate deaminase zinc-binding region family
protein [Streptococcus pneumoniae 4027-06]
gi|353749584|gb|EHD30228.1| putative deoxycytidylate deaminase [Streptococcus pneumoniae
GA11184]
gi|353750424|gb|EHD31064.1| cytidine and deoxycytidylate deaminase zinc-binding region family
protein [Streptococcus pneumoniae GA47502]
gi|353753798|gb|EHD34414.1| cytidine and deoxycytidylate deaminase zinc-binding region family
protein [Streptococcus pneumoniae 6735-05]
gi|353758058|gb|EHD38651.1| cytidine and deoxycytidylate deaminase zinc-binding region family
protein [Streptococcus pneumoniae GA44288]
gi|353759746|gb|EHD40329.1| cytidine and deoxycytidylate deaminase zinc-binding region family
protein [Streptococcus pneumoniae GA47033]
gi|353760052|gb|EHD40634.1| cytidine and deoxycytidylate deaminase zinc-binding region family
protein [Streptococcus pneumoniae GA47281]
gi|353762823|gb|EHD43381.1| cytidine and deoxycytidylate deaminase zinc-binding region family
protein [Streptococcus pneumoniae GA43265]
gi|353766732|gb|EHD47272.1| cytidine and deoxycytidylate deaminase zinc-binding region family
protein [Streptococcus pneumoniae GA44452]
gi|353770475|gb|EHD50988.1| cytidine and deoxycytidylate deaminase zinc-binding region family
protein [Streptococcus pneumoniae 6901-05]
gi|353773204|gb|EHD53703.1| cytidine and deoxycytidylate deaminase zinc-binding region family
protein [Streptococcus pneumoniae 7286-06]
gi|353776626|gb|EHD57101.1| cytidine and deoxycytidylate deaminase zinc-binding region family
protein [Streptococcus pneumoniae NP070]
gi|353779225|gb|EHD59691.1| cytidine and deoxycytidylate deaminase zinc-binding region family
protein [Streptococcus pneumoniae GA44500]
gi|353780601|gb|EHD61058.1| cytidine and deoxycytidylate deaminase zinc-binding region family
protein [Streptococcus pneumoniae GA41410]
gi|353784999|gb|EHD65419.1| cytidine and deoxycytidylate deaminase zinc-binding region family
protein [Streptococcus pneumoniae GA49447]
gi|353785740|gb|EHD66158.1| cytidine and deoxycytidylate deaminase zinc-binding region family
protein [Streptococcus pneumoniae GA41538]
gi|353787528|gb|EHD67930.1| cytidine and deoxycytidylate deaminase zinc-binding region family
protein [Streptococcus pneumoniae 5787-06]
gi|353790306|gb|EHD70689.1| cytidine and deoxycytidylate deaminase zinc-binding region family
protein [Streptococcus pneumoniae 6963-05]
gi|353791382|gb|EHD71760.1| cytidine and deoxycytidylate deaminase zinc-binding region family
protein [Streptococcus pneumoniae GA18523]
gi|353793649|gb|EHD74008.1| cytidine and deoxycytidylate deaminase zinc-binding region family
protein [Streptococcus pneumoniae GA44194]
gi|353798482|gb|EHD78812.1| cytidine and deoxycytidylate deaminase zinc-binding region family
protein [Streptococcus pneumoniae GA44378]
gi|353799392|gb|EHD79711.1| cytidine and deoxycytidylate deaminase zinc-binding region family
protein [Streptococcus pneumoniae GA44511]
gi|353800057|gb|EHD80371.1| cytidine and deoxycytidylate deaminase zinc-binding region family
protein [Streptococcus pneumoniae NP170]
gi|353803204|gb|EHD83496.1| cytidine and deoxycytidylate deaminase zinc-binding region family
protein [Streptococcus pneumoniae GA07643]
gi|353805594|gb|EHD85868.1| putative deoxycytidylate deaminase [Streptococcus pneumoniae
GA13455]
gi|353806542|gb|EHD86815.1| cytidine and deoxycytidylate deaminase zinc-binding region family
protein [Streptococcus pneumoniae GA11304]
gi|353809297|gb|EHD89557.1| putative deoxycytidylate deaminase [Streptococcus pneumoniae
GA13494]
gi|353812851|gb|EHD93084.1| putative deoxycytidylate deaminase [Streptococcus pneumoniae
GA13856]
gi|353814809|gb|EHD95032.1| putative deoxycytidylate deaminase [Streptococcus pneumoniae
GA14798]
gi|353815534|gb|EHD95750.1| putative deoxycytidylate deaminase [Streptococcus pneumoniae
GA13637]
gi|353819127|gb|EHD99325.1| putative deoxycytidylate deaminase [Streptococcus pneumoniae
GA16121]
gi|353823069|gb|EHE03244.1| putative deoxycytidylate deaminase [Streptococcus pneumoniae
GA16242]
gi|353823490|gb|EHE03664.1| putative deoxycytidylate deaminase [Streptococcus pneumoniae
GA16833]
gi|353829954|gb|EHE10084.1| putative deoxycytidylate deaminase [Streptococcus pneumoniae
GA17971]
gi|353831370|gb|EHE11499.1| putative deoxycytidylate deaminase [Streptococcus pneumoniae
GA17328]
gi|353832410|gb|EHE12528.1| putative deoxycytidylate deaminase [Streptococcus pneumoniae
GA17371]
gi|353836756|gb|EHE16844.1| putative deoxycytidylate deaminase [Streptococcus pneumoniae
GA19077]
gi|353837127|gb|EHE17213.1| putative deoxycytidylate deaminase [Streptococcus pneumoniae
GA19451]
gi|353839804|gb|EHE19878.1| putative deoxycytidylate deaminase [Streptococcus pneumoniae
GA41277]
gi|353844108|gb|EHE24152.1| putative deoxycytidylate deaminase [Streptococcus pneumoniae
GA41437]
gi|353844541|gb|EHE24584.1| putative deoxycytidylate deaminase [Streptococcus pneumoniae
GA41565]
gi|353846427|gb|EHE26460.1| putative deoxycytidylate deaminase [Streptococcus pneumoniae
GA41688]
gi|353850577|gb|EHE30581.1| putative deoxycytidylate deaminase [Streptococcus pneumoniae
GA43380]
gi|353853338|gb|EHE33321.1| cytidine and deoxycytidylate deaminase zinc-binding region family
protein [Streptococcus pneumoniae GA47360]
gi|353856113|gb|EHE36082.1| cytidine and deoxycytidylate deaminase zinc-binding region family
protein [Streptococcus pneumoniae GA47373]
gi|353857192|gb|EHE37155.1| cytidine and deoxycytidylate deaminase zinc-binding region family
protein [Streptococcus pneumoniae GA47388]
gi|353860105|gb|EHE40052.1| cytidine and deoxycytidylate deaminase zinc-binding region family
protein [Streptococcus pneumoniae GA47439]
gi|353862199|gb|EHE42132.1| putative deoxycytidylate deaminase [Streptococcus pneumoniae
GA47688]
gi|353862912|gb|EHE42842.1| putative deoxycytidylate deaminase [Streptococcus pneumoniae
GA47778]
gi|353866342|gb|EHE46244.1| cytidine and deoxycytidylate deaminase zinc-binding region family
protein [Streptococcus pneumoniae GA47976]
gi|353867824|gb|EHE47714.1| putative deoxycytidylate deaminase [Streptococcus pneumoniae
GA52306]
gi|353871197|gb|EHE51068.1| cytidine and deoxycytidylate deaminase zinc-binding region family
protein [Streptococcus pneumoniae GA54644]
gi|353873244|gb|EHE53105.1| putative deoxycytidylate deaminase [Streptococcus pneumoniae
Netherlands15B-37]
gi|353876679|gb|EHE56528.1| cytidine and deoxycytidylate deaminase zinc-binding region family
protein [Streptococcus pneumoniae NP127]
gi|353877535|gb|EHE57378.1| cytidine and deoxycytidylate deaminase zinc-binding region family
protein [Streptococcus pneumoniae GA47751]
gi|353880287|gb|EHE60103.1| cytidine and deoxycytidylate deaminase zinc-binding region family
protein [Streptococcus pneumoniae 5185-06]
gi|353882477|gb|EHE62288.1| cytidine and deoxycytidylate deaminase zinc-binding region family
protein [Streptococcus pneumoniae NP112]
gi|353882935|gb|EHE62744.1| cytidine and deoxycytidylate deaminase zinc-binding region family
protein [Streptococcus pneumoniae 3063-00]
gi|353888118|gb|EHE67894.1| cytidine and deoxycytidylate deaminase zinc-binding region family
protein [Streptococcus pneumoniae GA07228]
gi|353889375|gb|EHE69146.1| cytidine and deoxycytidylate deaminase zinc-binding region family
protein [Streptococcus pneumoniae GA08780]
gi|353889670|gb|EHE69438.1| cytidine and deoxycytidylate deaminase zinc-binding region family
protein [Streptococcus pneumoniae EU-NP01]
gi|353894040|gb|EHE73785.1| cytidine and deoxycytidylate deaminase zinc-binding region family
protein [Streptococcus pneumoniae GA19690]
gi|353894739|gb|EHE74480.1| cytidine and deoxycytidylate deaminase zinc-binding region family
protein [Streptococcus pneumoniae NorthCarolina6A-23]
gi|353902694|gb|EHE78222.1| putative deoxycytidylate deaminase [Streptococcus pneumoniae
GA11663]
gi|353903066|gb|EHE78592.1| cytidine and deoxycytidylate deaminase zinc-binding region family
protein [Streptococcus pneumoniae GA11426]
gi|353905896|gb|EHE81312.1| cytidine and deoxycytidylate deaminase zinc-binding region family
protein [Streptococcus pneumoniae GA13338]
gi|379137649|gb|AFC94440.1| dCMP deaminase [Streptococcus pneumoniae ST556]
gi|379532603|gb|EHY97828.1| cytidine and deoxycytidylate deaminase zinc-binding region family
protein [Streptococcus pneumoniae GA02254]
gi|379534462|gb|EHY99674.1| cytidine and deoxycytidylate deaminase zinc-binding region family
protein [Streptococcus pneumoniae GA02270]
gi|379534761|gb|EHY99971.1| cytidine and deoxycytidylate deaminase zinc-binding region family
protein [Streptococcus pneumoniae GA02714]
gi|379539212|gb|EHZ04391.1| cytidine and deoxycytidylate deaminase zinc-binding region family
protein [Streptococcus pneumoniae GA04175]
gi|379540156|gb|EHZ05330.1| cytidine and deoxycytidylate deaminase zinc-binding region family
protein [Streptococcus pneumoniae GA13499]
gi|379540587|gb|EHZ05759.1| cytidine and deoxycytidylate deaminase zinc-binding region family
protein [Streptococcus pneumoniae GA05245]
gi|379544837|gb|EHZ09981.1| cytidine and deoxycytidylate deaminase zinc-binding region family
protein [Streptococcus pneumoniae GA05248]
gi|379545423|gb|EHZ10562.1| cytidine and deoxycytidylate deaminase zinc-binding region family
protein [Streptococcus pneumoniae GA07914]
gi|379546719|gb|EHZ11857.1| cytidine and deoxycytidylate deaminase zinc-binding region family
protein [Streptococcus pneumoniae GA06083]
gi|379552262|gb|EHZ17352.1| cytidine and deoxycytidylate deaminase zinc-binding region family
protein [Streptococcus pneumoniae GA11856]
gi|379552306|gb|EHZ17395.1| cytidine and deoxycytidylate deaminase zinc-binding region family
protein [Streptococcus pneumoniae GA13430]
gi|379554202|gb|EHZ19282.1| cytidine and deoxycytidylate deaminase zinc-binding region family
protein [Streptococcus pneumoniae GA13224]
gi|379558548|gb|EHZ23581.1| cytidine and deoxycytidylate deaminase zinc-binding region family
protein [Streptococcus pneumoniae GA13723]
gi|379559879|gb|EHZ24906.1| cytidine and deoxycytidylate deaminase zinc-binding region family
protein [Streptococcus pneumoniae GA14373]
gi|379561475|gb|EHZ26492.1| cytidine and deoxycytidylate deaminase zinc-binding region family
protein [Streptococcus pneumoniae GA14688]
gi|379566526|gb|EHZ31514.1| cytidine and deoxycytidylate deaminase zinc-binding region family
protein [Streptococcus pneumoniae GA17719]
gi|379566792|gb|EHZ31779.1| cytidine and deoxycytidylate deaminase zinc-binding region family
protein [Streptococcus pneumoniae GA18068]
gi|379567229|gb|EHZ32215.1| cytidine and deoxycytidylate deaminase zinc-binding region family
protein [Streptococcus pneumoniae GA17457]
gi|379572049|gb|EHZ37006.1| cytidine and deoxycytidylate deaminase zinc-binding region family
protein [Streptococcus pneumoniae GA19923]
gi|379573235|gb|EHZ38191.1| cytidine and deoxycytidylate deaminase zinc-binding region family
protein [Streptococcus pneumoniae GA19101]
gi|379574733|gb|EHZ39671.1| cytidine and deoxycytidylate deaminase zinc-binding region family
protein [Streptococcus pneumoniae GA40028]
gi|379577532|gb|EHZ42451.1| cytidine and deoxycytidylate deaminase zinc-binding region family
protein [Streptococcus pneumoniae GA40183]
gi|379580565|gb|EHZ45455.1| cytidine and deoxycytidylate deaminase zinc-binding region family
protein [Streptococcus pneumoniae GA40410]
gi|379583901|gb|EHZ48778.1| cytidine and deoxycytidylate deaminase zinc-binding region family
protein [Streptococcus pneumoniae GA43257]
gi|379589156|gb|EHZ53996.1| cytidine and deoxycytidylate deaminase zinc-binding region family
protein [Streptococcus pneumoniae GA44128]
gi|379589681|gb|EHZ54520.1| cytidine and deoxycytidylate deaminase zinc-binding region family
protein [Streptococcus pneumoniae GA43264]
gi|379590428|gb|EHZ55266.1| cytidine and deoxycytidylate deaminase zinc-binding region family
protein [Streptococcus pneumoniae GA44386]
gi|379594253|gb|EHZ59063.1| cytidine and deoxycytidylate deaminase zinc-binding region family
protein [Streptococcus pneumoniae GA47179]
gi|379594930|gb|EHZ59739.1| cytidine and deoxycytidylate deaminase zinc-binding region family
protein [Streptococcus pneumoniae GA47210]
gi|379597404|gb|EHZ62207.1| cytidine and deoxycytidylate deaminase zinc-binding region family
protein [Streptococcus pneumoniae GA47461]
gi|379601438|gb|EHZ66211.1| cytidine and deoxycytidylate deaminase zinc-binding region family
protein [Streptococcus pneumoniae GA47522]
gi|379601845|gb|EHZ66617.1| cytidine and deoxycytidylate deaminase zinc-binding region family
protein [Streptococcus pneumoniae GA47628]
gi|379602328|gb|EHZ67099.1| cytidine and deoxycytidylate deaminase zinc-binding region family
protein [Streptococcus pneumoniae GA47597]
gi|379607602|gb|EHZ72348.1| cytidine and deoxycytidylate deaminase zinc-binding region family
protein [Streptococcus pneumoniae GA49194]
gi|379608738|gb|EHZ73483.1| cytidine and deoxycytidylate deaminase zinc-binding region family
protein [Streptococcus pneumoniae GA47794]
gi|379609154|gb|EHZ73895.1| cytidine and deoxycytidylate deaminase zinc-binding region family
protein [Streptococcus pneumoniae GA47760]
gi|379612655|gb|EHZ77372.1| cytidine and deoxycytidylate deaminase zinc-binding region family
protein [Streptococcus pneumoniae GA49542]
gi|379614023|gb|EHZ78733.1| cytidine and deoxycytidylate deaminase zinc-binding region family
protein [Streptococcus pneumoniae 7879-04]
gi|379616397|gb|EHZ81093.1| cytidine and deoxycytidylate deaminase zinc-binding region family
protein [Streptococcus pneumoniae 8190-05]
gi|379618354|gb|EHZ83029.1| cytidine and deoxycytidylate deaminase zinc-binding region family
protein [Streptococcus pneumoniae 5652-06]
gi|379620431|gb|EHZ85087.1| cytidine and deoxycytidylate deaminase zinc-binding region family
protein [Streptococcus pneumoniae 7533-05]
gi|379624125|gb|EHZ88758.1| cytidine and deoxycytidylate deaminase zinc-binding region family
protein [Streptococcus pneumoniae 4075-00]
gi|379624618|gb|EHZ89249.1| cytidine and deoxycytidylate deaminase zinc-binding region family
protein [Streptococcus pneumoniae EU-NP02]
gi|379627291|gb|EHZ91903.1| cytidine and deoxycytidylate deaminase zinc-binding region family
protein [Streptococcus pneumoniae EU-NP03]
gi|379632387|gb|EHZ96963.1| cytidine and deoxycytidylate deaminase zinc-binding region family
protein [Streptococcus pneumoniae EU-NP05]
gi|379633287|gb|EHZ97856.1| cytidine and deoxycytidylate deaminase zinc-binding region family
protein [Streptococcus pneumoniae NP141]
gi|379636611|gb|EIA01169.1| cytidine and deoxycytidylate deaminase zinc-binding region family
protein [Streptococcus pneumoniae GA05578]
gi|379638791|gb|EIA03336.1| cytidine and deoxycytidylate deaminase zinc-binding region family
protein [Streptococcus pneumoniae England14-9]
gi|379640428|gb|EIA04967.1| cytidine and deoxycytidylate deaminase zinc-binding region family
protein [Streptococcus pneumoniae GA02506]
gi|379641528|gb|EIA06063.1| cytidine and deoxycytidylate deaminase zinc-binding region family
protein [Streptococcus pneumoniae GA08825]
gi|381309529|gb|EIC50362.1| comE operon protein 2 [Streptococcus pneumoniae SV36]
gi|381317445|gb|EIC58170.1| comE operon protein 2 [Streptococcus pneumoniae SV35]
gi|381319234|gb|EIC59950.1| comE operon protein 2 [Streptococcus pneumoniae 459-5]
gi|395574570|gb|EJG35147.1| comE operon protein 2 [Streptococcus pneumoniae 2070035]
gi|395577045|gb|EJG37599.1| comE operon protein 2 [Streptococcus pneumoniae 2070005]
gi|395577270|gb|EJG37815.1| comE operon protein 2 [Streptococcus pneumoniae 2090008]
gi|395581152|gb|EJG41625.1| comE operon protein 2 [Streptococcus pneumoniae 2070108]
gi|395582492|gb|EJG42954.1| comE operon protein 2 [Streptococcus pneumoniae 2070109]
gi|395584724|gb|EJG45116.1| comE operon protein 2 [Streptococcus pneumoniae 2070335]
gi|395589584|gb|EJG49902.1| comE operon protein 2 [Streptococcus pneumoniae 2070531]
gi|395590004|gb|EJG50319.1| comE operon protein 2 [Streptococcus pneumoniae 2070425]
gi|395591934|gb|EJG52229.1| comE operon protein 2 [Streptococcus pneumoniae 2070768]
gi|395596610|gb|EJG56826.1| comE operon protein 2 [Streptococcus pneumoniae 2080076]
gi|395596895|gb|EJG57104.1| comE operon protein 2 [Streptococcus pneumoniae 2061376]
gi|395597987|gb|EJG58193.1| comE operon protein 2 [Streptococcus pneumoniae 2072047]
gi|395602641|gb|EJG62783.1| comE operon protein 2 [Streptococcus pneumoniae 2061617]
gi|395602967|gb|EJG63108.1| comE operon protein 2 [Streptococcus pneumoniae 2071247]
gi|395604821|gb|EJG64953.1| comE operon protein 2 [Streptococcus pneumoniae 2071004]
gi|395609246|gb|EJG69334.1| comE operon protein 2 [Streptococcus pneumoniae 2080913]
gi|395610057|gb|EJG70138.1| comE operon protein 2 [Streptococcus pneumoniae 2081074]
gi|395610232|gb|EJG70311.1| comE operon protein 2 [Streptococcus pneumoniae 2081685]
gi|395614635|gb|EJG74653.1| comE operon protein 2 [Streptococcus pneumoniae 2082170]
gi|395615677|gb|EJG75693.1| comE operon protein 2 [Streptococcus pneumoniae 2082239]
gi|395868511|gb|EJG79628.1| cytidine and deoxycytidylate deaminase zinc-binding region family
protein [Streptococcus pneumoniae SPAR27]
gi|395870820|gb|EJG81933.1| cytidine and deoxycytidylate deaminase zinc-binding region family
protein [Streptococcus pneumoniae SPAR48]
gi|395871373|gb|EJG82479.1| cytidine and deoxycytidylate deaminase zinc-binding region family
protein [Streptococcus pneumoniae SPAR95]
gi|395877946|gb|EJG89015.1| cytidine and deoxycytidylate deaminase zinc-binding region family
protein [Streptococcus pneumoniae SPAR55]
gi|395881882|gb|EJG92930.1| cytidine and deoxycytidylate deaminase zinc-binding region family
protein [Streptococcus pneumoniae GA17301]
gi|395882798|gb|EJG93842.1| cytidine and deoxycytidylate deaminase family protein
[Streptococcus pneumoniae GA04216]
gi|395884083|gb|EJG95125.1| cytidine and deoxycytidylate deaminase family protein
[Streptococcus pneumoniae GA04672]
gi|395887333|gb|EJG98348.1| cytidine and deoxycytidylate deaminase family protein
[Streptococcus pneumoniae GA60190]
gi|395889641|gb|EJH00648.1| cytidine and deoxycytidylate deaminase family protein
[Streptococcus pneumoniae GA58771]
gi|395890647|gb|EJH01653.1| cytidine and deoxycytidylate deaminase family protein
[Streptococcus pneumoniae GA54354]
gi|395892924|gb|EJH03914.1| cytidine and deoxycytidylate deaminase family protein
[Streptococcus pneumoniae GA58581]
gi|395894851|gb|EJH05828.1| cytidine and deoxycytidylate deaminase family protein
[Streptococcus pneumoniae GA56348]
gi|395895088|gb|EJH06064.1| cytidine and deoxycytidylate deaminase family protein
[Streptococcus pneumoniae GA56113]
gi|395900021|gb|EJH10960.1| cytidine and deoxycytidylate deaminase family protein
[Streptococcus pneumoniae GA19998]
gi|395903369|gb|EJH14301.1| cytidine and deoxycytidylate deaminase family protein
[Streptococcus pneumoniae GA17484]
gi|395903484|gb|EJH14414.1| cytidine and deoxycytidylate deaminase family protein
[Streptococcus pneumoniae GA60080]
gi|395905369|gb|EJH16274.1| cytidine and deoxycytidylate deaminase family protein
[Streptococcus pneumoniae GA62331]
gi|395908892|gb|EJH19769.1| cytidine and deoxycytidylate deaminase family protein
[Streptococcus pneumoniae GA60132]
gi|395911917|gb|EJH22781.1| cytidine and deoxycytidylate deaminase family protein
[Streptococcus pneumoniae GA62681]
gi|395912070|gb|EJH22933.1| cytidine and deoxycytidylate deaminase family protein
[Streptococcus pneumoniae GA58981]
gi|395914420|gb|EJH25264.1| cytidine and deoxycytidylate deaminase family protein
[Streptococcus pneumoniae GA47562]
gi|404277802|emb|CCM08357.1| putative cytidine and deoxycytidylate deaminase [Streptococcus
pneumoniae SPNA45]
gi|406369133|gb|AFS42823.1| late competence protein ComEB [Streptococcus pneumoniae gamPNI0373]
gi|429317604|emb|CCP37392.1| putative cytidine and deoxycytidylate deaminase [Streptococcus
pneumoniae SPN034156]
gi|429319146|emb|CCP32385.1| putative cytidine and deoxycytidylate deaminase [Streptococcus
pneumoniae SPN034183]
gi|429320961|emb|CCP34359.1| putative cytidine and deoxycytidylate deaminase [Streptococcus
pneumoniae SPN994039]
gi|429322781|emb|CCP30400.1| putative cytidine and deoxycytidylate deaminase [Streptococcus
pneumoniae SPN994038]
gi|444247857|gb|ELU54384.1| putative ComE operon protein 2 [Streptococcus pneumoniae PCS8106]
gi|444250102|gb|ELU56586.1| putative ComE operon protein 2 [Streptococcus pneumoniae PCS8203]
gi|444253309|gb|ELU59767.1| putative ComE operon protein 2 [Streptococcus pneumoniae PCS125219]
gi|444256598|gb|ELU62936.1| putative ComE operon protein 2 [Streptococcus pneumoniae PCS70012]
gi|444261299|gb|ELU67603.1| putative ComE operon protein 2 [Streptococcus pneumoniae PNI0002]
gi|444262414|gb|ELU68712.1| putative ComE operon protein 2 [Streptococcus pneumoniae PNI0006]
gi|444264847|gb|ELU70892.1| putative ComE operon protein 2 [Streptococcus pneumoniae PCS81218]
gi|444265213|gb|ELU71234.1| putative ComE operon protein 2 [Streptococcus pneumoniae PNI0007]
gi|444267900|gb|ELU73783.1| putative ComE operon protein 2 [Streptococcus pneumoniae PNI0008]
gi|444269152|gb|ELU74967.1| putative ComE operon protein 2 [Streptococcus pneumoniae PNI0010]
gi|444270454|gb|ELU76222.1| putative ComE operon protein 2 [Streptococcus pneumoniae PNI0009]
gi|444275251|gb|ELU80878.1| putative ComE operon protein 2 [Streptococcus pneumoniae PNI0153]
gi|444278103|gb|ELU83579.1| putative ComE operon protein 2 [Streptococcus pneumoniae PNI0076]
gi|444280824|gb|ELU86175.1| putative ComE operon protein 2 [Streptococcus pneumoniae PNI0199]
gi|444285228|gb|ELU90309.1| putative ComE operon protein 2 [Streptococcus pneumoniae PNI0360]
gi|444287139|gb|ELU92080.1| putative ComE operon protein 2 [Streptococcus pneumoniae PNI0427]
gi|444287405|gb|ELU92333.1| putative ComE operon protein 2 [Streptococcus pneumoniae PNI0446]
Length = 155
Score = 73.6 bits (179), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 47/120 (39%), Positives = 63/120 (52%), Gaps = 7/120 (5%)
Query: 89 LEWHEYFMASAFLVAKRSKDPVTRVGAVIVNEDNKIVGTGYNGMPIG---CSDDEFPWDK 145
L W EYF A A L+A RS +VGA++V +DNK++ TGYNG G C D E +
Sbjct: 6 LAWDEYFAAQALLIANRSTCKRAKVGAILV-KDNKVISTGYNGSVSGTEHCIDHECLVIE 64
Query: 146 NTHDELDMCHAEMNAILNKNSADT-KRCKLYTSLFPCNECAKVIIQSGIKEVIYMCDKQM 204
+ HAE+NAIL K Y + FPC C K ++Q G K V+Y+ +M
Sbjct: 65 G--HCVRTLHAEVNAILQGAERGVPKGFTAYVTHFPCLNCTKQLLQVGCKRVVYINQYRM 122
>gi|420149774|ref|ZP_14656942.1| cytidine and deoxycytidylate deaminase zinc-binding region
[Capnocytophaga sp. oral taxon 335 str. F0486]
gi|394752971|gb|EJF36576.1| cytidine and deoxycytidylate deaminase zinc-binding region
[Capnocytophaga sp. oral taxon 335 str. F0486]
Length = 146
Score = 73.6 bits (179), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 47/115 (40%), Positives = 66/115 (57%), Gaps = 11/115 (9%)
Query: 89 LEWHEYFMASAFLVAKRSKDPVTRVGAVIVNEDNKIVGTGYNGMPIG---CSDDEFPWDK 145
L + + +M A AK S +VGA+IV +D I+ GYNG P G C +DE +
Sbjct: 10 LRYDKAYMRMAMEWAKLSYSQRKQVGAIIV-KDRMIISDGYNGTPTGFDNCCEDE---EG 65
Query: 146 NTHDELDMCHAEMNAILNKNSA--DTKRCKLYTSLFPCNECAKVIIQSGIKEVIY 198
NTH + HAE NAI+ S+ ++ LY ++ PC EC+K+I QSGIK V+Y
Sbjct: 66 NTH--WYVLHAEANAIMKVASSTQSSEGATLYITMSPCKECSKLIYQSGIKRVVY 118
Score = 40.8 bits (94), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 19/42 (45%), Positives = 28/42 (66%), Gaps = 2/42 (4%)
Query: 2 NAILNKNSA--DTKRCKLYTSLFPCNECAKVIIQSGIKEVIY 41
NAI+ S+ ++ LY ++ PC EC+K+I QSGIK V+Y
Sbjct: 77 NAIMKVASSTQSSEGATLYITMSPCKECSKLIYQSGIKRVVY 118
>gi|229135152|ref|ZP_04263952.1| ComE operon protein 2 [Bacillus cereus BDRD-ST196]
gi|228648280|gb|EEL04315.1| ComE operon protein 2 [Bacillus cereus BDRD-ST196]
Length = 188
Score = 73.6 bits (179), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 47/119 (39%), Positives = 64/119 (53%), Gaps = 10/119 (8%)
Query: 89 LEWHEYFMASAFLVAKRSKDPVTRVGAVIVNEDNKIVGTGYNGMPIG---CSDDE-FPWD 144
+ W +YFM + L++ RS VGA IV D +I+ GYNG G C DD + D
Sbjct: 7 ISWDQYFMTQSHLLSLRSTCTRLAVGATIVR-DKRIIAGGYNGSIKGGVHCIDDGCYVID 65
Query: 145 KNTHDELDMCHAEMNAILN--KNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIYMCD 201
+ + HAEMNA+L K A T+ ++Y + FPC +C K IIQSG+ V Y D
Sbjct: 66 NHC---VRTIHAEMNALLQCAKFGAKTEGAEIYVTHFPCLQCCKAIIQSGVTAVYYAQD 121
Score = 43.9 bits (102), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 26/66 (39%), Positives = 37/66 (56%), Gaps = 6/66 (9%)
Query: 1 MNAILN--KNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIYMCDKHKQKPATIASKRM 58
MNA+L K A T+ ++Y + FPC +C K IIQSG+ V Y D +K P + +
Sbjct: 76 MNALLQCAKFGAKTEGAEIYVTHFPCLQCCKAIIQSGVTAVYYAQD-YKNHPYAV---EL 131
Query: 59 FDAAKV 64
F+ A V
Sbjct: 132 FEQASV 137
>gi|289168253|ref|YP_003446522.1| dCMP deaminase [Streptococcus mitis B6]
gi|307705252|ref|ZP_07642119.1| comE operon protein 2 [Streptococcus mitis SK597]
gi|307706964|ref|ZP_07643763.1| comE operon protein 2 [Streptococcus mitis SK321]
gi|418977955|ref|ZP_13525762.1| putative ComE operon protein 2 [Streptococcus mitis SK575]
gi|419455150|ref|ZP_13995110.1| cytidine and deoxycytidylate deaminase zinc-binding region family
protein [Streptococcus pneumoniae EU-NP04]
gi|288907820|emb|CBJ22660.1| dCMP deaminase [Streptococcus mitis B6]
gi|307617678|gb|EFN96846.1| comE operon protein 2 [Streptococcus mitis SK321]
gi|307621201|gb|EFO00271.1| comE operon protein 2 [Streptococcus mitis SK597]
gi|379629607|gb|EHZ94201.1| cytidine and deoxycytidylate deaminase zinc-binding region family
protein [Streptococcus pneumoniae EU-NP04]
gi|383349156|gb|EID27106.1| putative ComE operon protein 2 [Streptococcus mitis SK575]
Length = 155
Score = 73.6 bits (179), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 47/120 (39%), Positives = 63/120 (52%), Gaps = 7/120 (5%)
Query: 89 LEWHEYFMASAFLVAKRSKDPVTRVGAVIVNEDNKIVGTGYNGMPIG---CSDDEFPWDK 145
L W EYF A A L+A RS +VGA++V +DNK++ TGYNG G C D E +
Sbjct: 6 LAWDEYFAAQALLIANRSTCKRAKVGAILV-KDNKVISTGYNGSVSGTEHCIDHECLVIE 64
Query: 146 NTHDELDMCHAEMNAILNKNSADT-KRCKLYTSLFPCNECAKVIIQSGIKEVIYMCDKQM 204
+ HAE+NAIL K Y + FPC C K ++Q G K V+Y+ +M
Sbjct: 65 G--HCVRTLHAEVNAILQGAERGVPKGFTAYVTHFPCLNCTKQLLQVGCKRVVYINQYRM 122
>gi|395243326|ref|ZP_10420313.1| Competence protein ComEB [Lactobacillus hominis CRBIP 24.179]
gi|394484556|emb|CCI81321.1| Competence protein ComEB [Lactobacillus hominis CRBIP 24.179]
Length = 164
Score = 73.6 bits (179), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 42/122 (34%), Positives = 70/122 (57%), Gaps = 12/122 (9%)
Query: 87 DVLEWHEYFMASAFLVAKRSKDPVTRVGAVIVNEDNKIVGTGYNGMPIGCSDDEFPWDKN 146
D + W +YFM A ++++RS VG+V+V +D++++ TGYNG G + D
Sbjct: 4 DRIPWKQYFMMQALVISQRSTCDRALVGSVLV-KDDRMIATGYNGSVSG----QPHCDDV 58
Query: 147 THDELD-----MCHAEMNAILN--KNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIYM 199
H +D H+EMNA++ KN T+ ++Y + FPC C+K ++Q+GIK++ Y
Sbjct: 59 GHLMVDGHCVRTIHSEMNALIQCAKNGISTEGTEIYVTYFPCFNCSKCLVQAGIKKINYY 118
Query: 200 CD 201
D
Sbjct: 119 YD 120
Score = 43.1 bits (100), Expect = 0.069, Method: Compositional matrix adjust.
Identities = 19/48 (39%), Positives = 31/48 (64%), Gaps = 2/48 (4%)
Query: 1 MNAILN--KNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIYMCDKH 46
MNA++ KN T+ ++Y + FPC C+K ++Q+GIK++ Y D H
Sbjct: 75 MNALIQCAKNGISTEGTEIYVTYFPCFNCSKCLVQAGIKKINYYYDYH 122
>gi|322376947|ref|ZP_08051440.1| cytidine and deoxycytidylate deaminase family protein
[Streptococcus sp. M334]
gi|321282754|gb|EFX59761.1| cytidine and deoxycytidylate deaminase family protein
[Streptococcus sp. M334]
Length = 155
Score = 73.6 bits (179), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 47/120 (39%), Positives = 63/120 (52%), Gaps = 7/120 (5%)
Query: 89 LEWHEYFMASAFLVAKRSKDPVTRVGAVIVNEDNKIVGTGYNGMPIG---CSDDEFPWDK 145
L W EYF A A L+A RS +VGA++V +DNK++ TGYNG G C D E +
Sbjct: 6 LAWDEYFAAQALLIANRSTCKRAKVGAILV-KDNKVISTGYNGSVSGTEHCIDHECLVIE 64
Query: 146 NTHDELDMCHAEMNAILNKNSADT-KRCKLYTSLFPCNECAKVIIQSGIKEVIYMCDKQM 204
+ HAE+NAIL K Y + FPC C K ++Q G K V+Y+ +M
Sbjct: 65 G--HCVRTLHAEVNAILQGAERGVPKGFTAYVTHFPCLNCTKQLLQVGCKRVVYINQYRM 122
>gi|15643170|ref|NP_228214.1| deoxycytidylate deaminase [Thermotoga maritima MSB8]
gi|4980909|gb|AAD35489.1|AE001720_3 deoxycytidylate deaminase, putative [Thermotoga maritima MSB8]
Length = 201
Score = 73.6 bits (179), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 47/130 (36%), Positives = 69/130 (53%), Gaps = 12/130 (9%)
Query: 83 KRVDDVLEWHEYFMASAFLVAKRSKDPVTRVGAVIVNEDNKIVGTGYNGMP--------I 134
K+ D W YFM A +V++RS +VGAVIV +D++I+ TGYN P I
Sbjct: 48 KKPDSRESWDSYFMRIARMVSERSTCVHRKVGAVIV-KDHRILATGYNQPPSKFPHCNEI 106
Query: 135 GCSDDEFPWDKNTHDEL-DMCHAEMNAILN--KNSADTKRCKLYTSLFPCNECAKVIIQS 191
GC D+ + H E+ HAE NA++ K +Y + PC+ CA++I+ +
Sbjct: 107 GCIRDDLEINSGEHQEICYALHAEQNALMQAAKFGIAVNGATIYVTHKPCSICARLIVNA 166
Query: 192 GIKEVIYMCD 201
GIK V+Y D
Sbjct: 167 GIKRVVYEKD 176
>gi|417924203|ref|ZP_12567655.1| putative ComE operon protein 2 [Streptococcus mitis SK569]
gi|419766392|ref|ZP_14292596.1| putative ComE operon protein 2 [Streptococcus mitis SK579]
gi|342836257|gb|EGU70473.1| putative ComE operon protein 2 [Streptococcus mitis SK569]
gi|383354128|gb|EID31704.1| putative ComE operon protein 2 [Streptococcus mitis SK579]
Length = 155
Score = 73.6 bits (179), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 47/120 (39%), Positives = 63/120 (52%), Gaps = 7/120 (5%)
Query: 89 LEWHEYFMASAFLVAKRSKDPVTRVGAVIVNEDNKIVGTGYNGMPIG---CSDDEFPWDK 145
L W EYF A A L+A RS +VGA++V +DNK++ TGYNG G C D E +
Sbjct: 6 LAWDEYFAAQALLIANRSTCKRAKVGAILV-KDNKVISTGYNGSVSGTEHCIDHECLVIE 64
Query: 146 NTHDELDMCHAEMNAILNKNSADT-KRCKLYTSLFPCNECAKVIIQSGIKEVIYMCDKQM 204
+ HAE+NAIL K Y + FPC C K ++Q G K V+Y+ +M
Sbjct: 65 G--HCVRTLHAEVNAILQGAERGVPKGFTAYVTHFPCLNCTKQLLQVGCKRVVYINQYRM 122
>gi|311031602|ref|ZP_07709692.1| hypothetical protein Bm3-1_13811 [Bacillus sp. m3-13]
Length = 190
Score = 73.6 bits (179), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 50/123 (40%), Positives = 65/123 (52%), Gaps = 10/123 (8%)
Query: 89 LEWHEYFMASAFLVAKRSKDPVTRVGAVIVNEDNKIVGTGYNGMPIGCSD--DEFPWDKN 146
+ W +YFMA + L+A RS VGA IV D +I+ GYNG G DE + +
Sbjct: 5 ISWDQYFMAQSHLLALRSTCTRLAVGATIVR-DKRIIAGGYNGSIAGGVHCIDEGCYVID 63
Query: 147 THDELDMCHAEMNAIL--NKNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIYMCDKQM 204
H + HAEMNA+L +K T ++Y + FPC C K IIQ+GIK V Y M
Sbjct: 64 NHC-VRTIHAEMNALLQCSKFGVPTTGAEIYVTHFPCLHCCKAIIQAGIKTVYY----AM 118
Query: 205 SYK 207
YK
Sbjct: 119 EYK 121
Score = 43.5 bits (101), Expect = 0.059, Method: Compositional matrix adjust.
Identities = 29/76 (38%), Positives = 41/76 (53%), Gaps = 7/76 (9%)
Query: 1 MNAIL--NKNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIYMCDKHKQKPATIASKRM 58
MNA+L +K T ++Y + FPC C K IIQ+GIK V Y + +K P + M
Sbjct: 74 MNALLQCSKFGVPTTGAEIYVTHFPCLHCCKAIIQAGIKTVYYAME-YKNHPYAL---EM 129
Query: 59 FDAAKVHYWS-EMDKM 73
F+ A V E+D+M
Sbjct: 130 FEQADVRVEQVELDEM 145
>gi|315225628|ref|ZP_07867437.1| competence protein ComEB [Capnocytophaga ochracea F0287]
gi|393780796|ref|ZP_10369002.1| cytidine and deoxycytidylate deaminase zinc-binding region
[Capnocytophaga sp. oral taxon 412 str. F0487]
gi|420159273|ref|ZP_14666080.1| cytidine and deoxycytidylate deaminase zinc-binding region
[Capnocytophaga ochracea str. Holt 25]
gi|314944445|gb|EFS96485.1| competence protein ComEB [Capnocytophaga ochracea F0287]
gi|392607910|gb|EIW90776.1| cytidine and deoxycytidylate deaminase zinc-binding region
[Capnocytophaga sp. oral taxon 412 str. F0487]
gi|394762571|gb|EJF44790.1| cytidine and deoxycytidylate deaminase zinc-binding region
[Capnocytophaga ochracea str. Holt 25]
Length = 146
Score = 73.6 bits (179), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 47/115 (40%), Positives = 66/115 (57%), Gaps = 11/115 (9%)
Query: 89 LEWHEYFMASAFLVAKRSKDPVTRVGAVIVNEDNKIVGTGYNGMPIG---CSDDEFPWDK 145
L + + +M A AK S +VGA+IV +D I+ GYNG P G C +DE +
Sbjct: 10 LRYDKAYMRMAMEWAKLSYSQRKQVGAIIV-KDRMIISDGYNGTPTGFDNCCEDE---EG 65
Query: 146 NTHDELDMCHAEMNAILNKNSA--DTKRCKLYTSLFPCNECAKVIIQSGIKEVIY 198
NTH + HAE NAI+ S+ ++ LY ++ PC EC+K+I QSGIK V+Y
Sbjct: 66 NTH--WYVLHAEANAIMKVASSTQSSEGATLYITMSPCKECSKLIYQSGIKRVVY 118
Score = 40.8 bits (94), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 19/42 (45%), Positives = 28/42 (66%), Gaps = 2/42 (4%)
Query: 2 NAILNKNSA--DTKRCKLYTSLFPCNECAKVIIQSGIKEVIY 41
NAI+ S+ ++ LY ++ PC EC+K+I QSGIK V+Y
Sbjct: 77 NAIMKVASSTQSSEGATLYITMSPCKECSKLIYQSGIKRVVY 118
>gi|118592805|ref|ZP_01550194.1| CMP/dCMP deaminase, zinc-binding protein [Stappia aggregata IAM
12614]
gi|118434575|gb|EAV41227.1| CMP/dCMP deaminase, zinc-binding protein [Stappia aggregata IAM
12614]
Length = 158
Score = 73.2 bits (178), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 44/108 (40%), Positives = 62/108 (57%), Gaps = 4/108 (3%)
Query: 90 EWHEYFMASAFLVAKRSKDPVTRVGAVIVNEDNKIVGTGYNGMPIGCSD-DEFPWDKNTH 148
+W + F+ +A+ S+D +VGAVIV +I TGYNG+P G S DE D+ +
Sbjct: 7 KWRDRFLGLCDHIAQWSEDRDFKVGAVIVGPGQEIRATGYNGLPRGVSGTDETRLDRPSG 66
Query: 149 DELDMC-HAEMNAILN--KNSADTKRCKLYTSLFPCNECAKVIIQSGI 193
++ HAE NAI N + A C LY + FPC +CA+ IIQSG+
Sbjct: 67 EKFFWVEHAERNAIYNAARAGAALAGCTLYVNRFPCADCARAIIQSGL 114
Score = 36.2 bits (82), Expect = 9.0, Method: Compositional matrix adjust.
Identities = 13/22 (59%), Positives = 17/22 (77%)
Query: 15 CKLYTSLFPCNECAKVIIQSGI 36
C LY + FPC +CA+ IIQSG+
Sbjct: 93 CTLYVNRFPCADCARAIIQSGL 114
>gi|423400827|ref|ZP_17378000.1| ComE operon protein 2 [Bacillus cereus BAG2X1-2]
gi|423478468|ref|ZP_17455183.1| ComE operon protein 2 [Bacillus cereus BAG6X1-1]
gi|401653817|gb|EJS71360.1| ComE operon protein 2 [Bacillus cereus BAG2X1-2]
gi|402428630|gb|EJV60727.1| ComE operon protein 2 [Bacillus cereus BAG6X1-1]
Length = 185
Score = 73.2 bits (178), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 47/119 (39%), Positives = 63/119 (52%), Gaps = 10/119 (8%)
Query: 89 LEWHEYFMASAFLVAKRSKDPVTRVGAVIVNEDNKIVGTGYNGMPIG---CSDDE-FPWD 144
+ W +YFM + L++ RS VGA IV D +I+ GYNG G C DD + D
Sbjct: 4 ISWDQYFMTQSHLLSLRSTCTRLAVGATIVR-DKRIIAGGYNGSIKGGVHCIDDGCYVID 62
Query: 145 KNTHDELDMCHAEMNAILN--KNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIYMCD 201
+ + HAEMNA+L K T+ ++Y + FPC +C K IIQSGI V Y D
Sbjct: 63 NHC---VRTIHAEMNALLQCAKFGVKTEEAEIYVTHFPCLQCCKAIIQSGITAVYYAQD 118
Score = 43.1 bits (100), Expect = 0.061, Method: Compositional matrix adjust.
Identities = 26/66 (39%), Positives = 36/66 (54%), Gaps = 6/66 (9%)
Query: 1 MNAILN--KNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIYMCDKHKQKPATIASKRM 58
MNA+L K T+ ++Y + FPC +C K IIQSGI V Y D +K P + +
Sbjct: 73 MNALLQCAKFGVKTEEAEIYVTHFPCLQCCKAIIQSGITAVYYAQD-YKNHPYAV---EL 128
Query: 59 FDAAKV 64
F+ A V
Sbjct: 129 FEKANV 134
>gi|383938421|ref|ZP_09991632.1| putative ComE operon protein 2 [Streptococcus pseudopneumoniae
SK674]
gi|418968743|ref|ZP_13520146.1| putative ComE operon protein 2 [Streptococcus pseudopneumoniae ATCC
BAA-960]
gi|421274656|ref|ZP_15725488.1| cytidine and deoxycytidylate deaminase zinc-binding region family
protein [Streptococcus pneumoniae GA52612]
gi|383352533|gb|EID30225.1| putative ComE operon protein 2 [Streptococcus pseudopneumoniae ATCC
BAA-960]
gi|383714630|gb|EID70625.1| putative ComE operon protein 2 [Streptococcus pseudopneumoniae
SK674]
gi|395875384|gb|EJG86465.1| cytidine and deoxycytidylate deaminase zinc-binding region family
protein [Streptococcus pneumoniae GA52612]
Length = 155
Score = 73.2 bits (178), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 47/120 (39%), Positives = 63/120 (52%), Gaps = 7/120 (5%)
Query: 89 LEWHEYFMASAFLVAKRSKDPVTRVGAVIVNEDNKIVGTGYNGMPIG---CSDDEFPWDK 145
L W EYF A A L+A RS +VGA++V +DNK++ TGYNG G C D E +
Sbjct: 6 LAWDEYFAAQALLIANRSTCKRAKVGAILV-KDNKVISTGYNGSVSGTEHCIDHECLVIE 64
Query: 146 NTHDELDMCHAEMNAILNKNSADT-KRCKLYTSLFPCNECAKVIIQSGIKEVIYMCDKQM 204
+ HAE+NAIL K Y + FPC C K ++Q G K V+Y+ +M
Sbjct: 65 G--HCVRTLHAEVNAILQGAERGVPKGFTAYVTHFPCLNCTKQLLQVGCKRVVYINQYRM 122
>gi|410456858|ref|ZP_11310709.1| hypothetical protein BABA_23390 [Bacillus bataviensis LMG 21833]
gi|409927240|gb|EKN64383.1| hypothetical protein BABA_23390 [Bacillus bataviensis LMG 21833]
Length = 154
Score = 73.2 bits (178), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 47/119 (39%), Positives = 61/119 (51%), Gaps = 10/119 (8%)
Query: 89 LEWHEYFMASAFLVAKRSKDPVTRVGAVIVNEDNKIVGTGYNGMPIGCSDDEFPWDKNT- 147
+ W +YFMA + L+A RS VGA IV D +I+ GYNG G + DK
Sbjct: 4 ISWDQYFMAQSHLLALRSTCTRLTVGATIVR-DKRIIAGGYNGSIAG---GDHCIDKGCY 59
Query: 148 ---HDELDMCHAEMNAILN--KNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIYMCD 201
H + HAEMNA+L K T ++Y + FPC +C K +IQ GIK V Y D
Sbjct: 60 VIDHHCVRTIHAEMNALLQCAKFGVPTAEAEIYVTHFPCLQCCKALIQGGIKTVYYAED 118
Score = 42.4 bits (98), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 26/66 (39%), Positives = 35/66 (53%), Gaps = 6/66 (9%)
Query: 1 MNAILN--KNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIYMCDKHKQKPATIASKRM 58
MNA+L K T ++Y + FPC +C K +IQ GIK V Y D +K P I +
Sbjct: 73 MNALLQCAKFGVPTAEAEIYVTHFPCLQCCKALIQGGIKTVYYAED-YKNNPYAI---EL 128
Query: 59 FDAAKV 64
F+ A V
Sbjct: 129 FEQAHV 134
>gi|218905463|ref|YP_002453297.1| ComE operon protein 2 [Bacillus cereus AH820]
gi|218539989|gb|ACK92387.1| ComE operon protein 2 [Bacillus cereus AH820]
Length = 185
Score = 73.2 bits (178), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 47/119 (39%), Positives = 63/119 (52%), Gaps = 10/119 (8%)
Query: 89 LEWHEYFMASAFLVAKRSKDPVTRVGAVIVNEDNKIVGTGYNGMPIG---CSDDE-FPWD 144
+ W +YFM + L++ RS VGA IV D +I+ GYNG G C DD + D
Sbjct: 4 ISWDQYFMTQSHLLSLRSTCTRLAVGATIVR-DKRIIAGGYNGSIKGGVHCIDDGCYVID 62
Query: 145 KNTHDELDMCHAEMNAILN--KNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIYMCD 201
+ + HAEMNA+L K T+ ++Y + FPC +C K IIQSGI V Y D
Sbjct: 63 NHC---VRTIHAEMNALLQCAKFGVKTEEAEIYVTHFPCLQCCKAIIQSGITAVYYAQD 118
Score = 43.1 bits (100), Expect = 0.064, Method: Compositional matrix adjust.
Identities = 26/66 (39%), Positives = 36/66 (54%), Gaps = 6/66 (9%)
Query: 1 MNAILN--KNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIYMCDKHKQKPATIASKRM 58
MNA+L K T+ ++Y + FPC +C K IIQSGI V Y D +K P + +
Sbjct: 73 MNALLQCAKFGVKTEEAEIYVTHFPCLQCCKAIIQSGITAVYYAQD-YKNHPYAV---EL 128
Query: 59 FDAAKV 64
F+ A V
Sbjct: 129 FEKANV 134
>gi|52141178|ref|YP_085651.1| competence protein ComE [Bacillus cereus E33L]
gi|51974647|gb|AAU16197.1| comE operon protein 2 [Bacillus cereus E33L]
Length = 185
Score = 73.2 bits (178), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 47/119 (39%), Positives = 63/119 (52%), Gaps = 10/119 (8%)
Query: 89 LEWHEYFMASAFLVAKRSKDPVTRVGAVIVNEDNKIVGTGYNGMPIG---CSDDE-FPWD 144
+ W +YFM + L++ RS VGA IV D +I+ GYNG G C DD + D
Sbjct: 4 ISWDQYFMTQSHLLSLRSTCTRLAVGATIVR-DKRIIAGGYNGSIKGGVHCIDDGCYVID 62
Query: 145 KNTHDELDMCHAEMNAILN--KNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIYMCD 201
+ + HAEMNA+L K T+ ++Y + FPC +C K IIQSGI V Y D
Sbjct: 63 NHC---VRTIHAEMNALLQCAKFGVKTEEAEIYVTHFPCLQCCKAIIQSGITAVYYAQD 118
Score = 42.0 bits (97), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 26/66 (39%), Positives = 35/66 (53%), Gaps = 6/66 (9%)
Query: 1 MNAILN--KNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIYMCDKHKQKPATIASKRM 58
MNA+L K T+ ++Y + FPC +C K IIQSGI V Y D +K P + +
Sbjct: 73 MNALLQCAKFGVKTEEAEIYVTHFPCLQCCKAIIQSGITAVYYAQD-YKNHPYAV---EL 128
Query: 59 FDAAKV 64
F A V
Sbjct: 129 FKKANV 134
>gi|423457425|ref|ZP_17434222.1| ComE operon protein 2 [Bacillus cereus BAG5X2-1]
gi|401147809|gb|EJQ55302.1| ComE operon protein 2 [Bacillus cereus BAG5X2-1]
Length = 185
Score = 73.2 bits (178), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 47/119 (39%), Positives = 63/119 (52%), Gaps = 10/119 (8%)
Query: 89 LEWHEYFMASAFLVAKRSKDPVTRVGAVIVNEDNKIVGTGYNGMPIG---CSDDE-FPWD 144
+ W +YFM + L++ RS VGA IV D +I+ GYNG G C DD + D
Sbjct: 4 ISWDQYFMTQSHLLSLRSTCTRLAVGATIVR-DKRIIAGGYNGSIKGGVHCIDDGCYVID 62
Query: 145 KNTHDELDMCHAEMNAILN--KNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIYMCD 201
+ + HAEMNA+L K T+ ++Y + FPC +C K IIQSGI V Y D
Sbjct: 63 NHC---VRTIHAEMNALLQCAKFGVKTEEAEIYVTHFPCLQCCKAIIQSGITAVYYAQD 118
Score = 42.0 bits (97), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 23/55 (41%), Positives = 31/55 (56%), Gaps = 3/55 (5%)
Query: 1 MNAILN--KNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIYMCDKHKQKPATI 53
MNA+L K T+ ++Y + FPC +C K IIQSGI V Y D +K P +
Sbjct: 73 MNALLQCAKFGVKTEEAEIYVTHFPCLQCCKAIIQSGITAVYYAQD-YKNHPYAV 126
>gi|229031977|ref|ZP_04187962.1| ComE operon protein 2 [Bacillus cereus AH1271]
gi|228729332|gb|EEL80324.1| ComE operon protein 2 [Bacillus cereus AH1271]
Length = 188
Score = 73.2 bits (178), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 47/119 (39%), Positives = 63/119 (52%), Gaps = 10/119 (8%)
Query: 89 LEWHEYFMASAFLVAKRSKDPVTRVGAVIVNEDNKIVGTGYNGMPIG---CSDDE-FPWD 144
+ W +YFM + L++ RS VGA IV D +I+ GYNG G C DD + D
Sbjct: 7 ISWDQYFMTQSHLLSLRSTCTRLAVGATIVR-DKRIIAGGYNGSIKGGVHCIDDGCYVID 65
Query: 145 KNTHDELDMCHAEMNAILN--KNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIYMCD 201
+ + HAEMNA+L K T+ ++Y + FPC +C K IIQSGI V Y D
Sbjct: 66 NHC---VRTIHAEMNALLQCAKFGVKTEEAEIYVTHFPCLQCCKAIIQSGITAVYYAQD 121
Score = 43.1 bits (100), Expect = 0.069, Method: Compositional matrix adjust.
Identities = 26/66 (39%), Positives = 36/66 (54%), Gaps = 6/66 (9%)
Query: 1 MNAILN--KNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIYMCDKHKQKPATIASKRM 58
MNA+L K T+ ++Y + FPC +C K IIQSGI V Y D +K P + +
Sbjct: 76 MNALLQCAKFGVKTEEAEIYVTHFPCLQCCKAIIQSGITAVYYAQD-YKNHPYAV---EL 131
Query: 59 FDAAKV 64
F+ A V
Sbjct: 132 FEKANV 137
>gi|30264397|ref|NP_846774.1| ComE operon protein 2 [Bacillus anthracis str. Ames]
gi|42783453|ref|NP_980700.1| competence protein ComE [Bacillus cereus ATCC 10987]
gi|47569322|ref|ZP_00240006.1| comE operon protein 2 [Bacillus cereus G9241]
gi|47778306|ref|YP_022694.1| competence protein ComE [Bacillus anthracis str. 'Ames Ancestor']
gi|49187220|ref|YP_030472.1| competence protein ComE [Bacillus anthracis str. Sterne]
gi|49481368|ref|YP_038380.1| competence protein ComE [Bacillus thuringiensis serovar konkukian
str. 97-27]
gi|65321698|ref|ZP_00394657.1| COG2131: Deoxycytidylate deaminase [Bacillus anthracis str. A2012]
gi|165872069|ref|ZP_02216709.1| ComE operon protein 2 [Bacillus anthracis str. A0488]
gi|167634581|ref|ZP_02392901.1| ComE operon protein 2 [Bacillus anthracis str. A0442]
gi|167638591|ref|ZP_02396867.1| ComE operon protein 2 [Bacillus anthracis str. A0193]
gi|170687331|ref|ZP_02878548.1| ComE operon protein 2 [Bacillus anthracis str. A0465]
gi|170707358|ref|ZP_02897812.1| ComE operon protein 2 [Bacillus anthracis str. A0389]
gi|177653276|ref|ZP_02935528.1| ComE operon protein 2 [Bacillus anthracis str. A0174]
gi|190566854|ref|ZP_03019770.1| ComE operon protein 2 [Bacillus anthracis str. Tsiankovskii-I]
gi|196034327|ref|ZP_03101736.1| ComE operon protein 2 [Bacillus cereus W]
gi|196039164|ref|ZP_03106470.1| ComE operon protein 2 [Bacillus cereus NVH0597-99]
gi|196044885|ref|ZP_03112119.1| ComE operon protein 2 [Bacillus cereus 03BB108]
gi|206975981|ref|ZP_03236891.1| ComE operon protein 2 [Bacillus cereus H3081.97]
gi|217961816|ref|YP_002340386.1| ComE operon protein 2 [Bacillus cereus AH187]
gi|222097771|ref|YP_002531828.1| come operon protein 2 [Bacillus cereus Q1]
gi|227817103|ref|YP_002817112.1| ComE operon protein 2 [Bacillus anthracis str. CDC 684]
gi|229603209|ref|YP_002868616.1| ComE operon protein 2 [Bacillus anthracis str. A0248]
gi|254684083|ref|ZP_05147943.1| comE operon protein 2 [Bacillus anthracis str. CNEVA-9066]
gi|254721917|ref|ZP_05183706.1| comE operon protein 2 [Bacillus anthracis str. A1055]
gi|254736431|ref|ZP_05194137.1| comE operon protein 2 [Bacillus anthracis str. Western North
America USA6153]
gi|254741468|ref|ZP_05199155.1| comE operon protein 2 [Bacillus anthracis str. Kruger B]
gi|254750907|ref|ZP_05202946.1| comE operon protein 2 [Bacillus anthracis str. Vollum]
gi|254757765|ref|ZP_05209792.1| comE operon protein 2 [Bacillus anthracis str. Australia 94]
gi|300118681|ref|ZP_07056409.1| ComE operon protein 2 [Bacillus cereus SJ1]
gi|301055818|ref|YP_003794029.1| competence protein ComE [Bacillus cereus biovar anthracis str. CI]
gi|375286333|ref|YP_005106772.1| ComE operon protein 2 [Bacillus cereus NC7401]
gi|376268224|ref|YP_005120936.1| dCMP deaminase [Bacillus cereus F837/76]
gi|384182146|ref|YP_005567908.1| ComE operon protein 2 [Bacillus thuringiensis serovar finitimus
YBT-020]
gi|402555539|ref|YP_006596810.1| ComE operon protein 2 [Bacillus cereus FRI-35]
gi|421638401|ref|ZP_16078997.1| ComE operon protein 2 [Bacillus anthracis str. BF1]
gi|423354819|ref|ZP_17332444.1| ComE operon protein 2 [Bacillus cereus IS075]
gi|423373795|ref|ZP_17351134.1| ComE operon protein 2 [Bacillus cereus AND1407]
gi|423549932|ref|ZP_17526259.1| ComE operon protein 2 [Bacillus cereus ISP3191]
gi|423570566|ref|ZP_17546811.1| ComE operon protein 2 [Bacillus cereus MSX-A12]
gi|423573994|ref|ZP_17550113.1| ComE operon protein 2 [Bacillus cereus MSX-D12]
gi|423604024|ref|ZP_17579917.1| ComE operon protein 2 [Bacillus cereus VD102]
gi|30259055|gb|AAP28260.1| ComE operon protein 2 [Bacillus anthracis str. Ames]
gi|42739382|gb|AAS43308.1| ComE operon protein 2 [Bacillus cereus ATCC 10987]
gi|47552011|gb|AAT35428.1| ComE operon protein 2 [Bacillus anthracis str. 'Ames Ancestor']
gi|47553993|gb|EAL12360.1| comE operon protein 2 [Bacillus cereus G9241]
gi|49181147|gb|AAT56523.1| ComE operon protein 2 [Bacillus anthracis str. Sterne]
gi|49332924|gb|AAT63570.1| comE operon protein 2 [Bacillus thuringiensis serovar konkukian
str. 97-27]
gi|164712200|gb|EDR17737.1| ComE operon protein 2 [Bacillus anthracis str. A0488]
gi|167513439|gb|EDR88809.1| ComE operon protein 2 [Bacillus anthracis str. A0193]
gi|167530033|gb|EDR92768.1| ComE operon protein 2 [Bacillus anthracis str. A0442]
gi|170127602|gb|EDS96475.1| ComE operon protein 2 [Bacillus anthracis str. A0389]
gi|170668526|gb|EDT19272.1| ComE operon protein 2 [Bacillus anthracis str. A0465]
gi|172081558|gb|EDT66630.1| ComE operon protein 2 [Bacillus anthracis str. A0174]
gi|190561845|gb|EDV15814.1| ComE operon protein 2 [Bacillus anthracis str. Tsiankovskii-I]
gi|195992869|gb|EDX56828.1| ComE operon protein 2 [Bacillus cereus W]
gi|196024373|gb|EDX63046.1| ComE operon protein 2 [Bacillus cereus 03BB108]
gi|196029791|gb|EDX68392.1| ComE operon protein 2 [Bacillus cereus NVH0597-99]
gi|206745733|gb|EDZ57130.1| ComE operon protein 2 [Bacillus cereus H3081.97]
gi|217065815|gb|ACJ80065.1| ComE operon protein 2 [Bacillus cereus AH187]
gi|221241829|gb|ACM14539.1| comE operon protein 2 [Bacillus cereus Q1]
gi|227007781|gb|ACP17524.1| ComE operon protein 2 [Bacillus anthracis str. CDC 684]
gi|229267617|gb|ACQ49254.1| ComE operon protein 2 [Bacillus anthracis str. A0248]
gi|298723930|gb|EFI64644.1| ComE operon protein 2 [Bacillus cereus SJ1]
gi|300377987|gb|ADK06891.1| comE operon protein 2 [Bacillus cereus biovar anthracis str. CI]
gi|324328230|gb|ADY23490.1| ComE operon protein 2 [Bacillus thuringiensis serovar finitimus
YBT-020]
gi|358354860|dbj|BAL20032.1| ComE operon protein 2 [Bacillus cereus NC7401]
gi|364514024|gb|AEW57423.1| dCMP deaminase [Bacillus cereus F837/76]
gi|401085823|gb|EJP94057.1| ComE operon protein 2 [Bacillus cereus IS075]
gi|401095196|gb|EJQ03256.1| ComE operon protein 2 [Bacillus cereus AND1407]
gi|401189548|gb|EJQ96598.1| ComE operon protein 2 [Bacillus cereus ISP3191]
gi|401203762|gb|EJR10597.1| ComE operon protein 2 [Bacillus cereus MSX-A12]
gi|401212563|gb|EJR19306.1| ComE operon protein 2 [Bacillus cereus MSX-D12]
gi|401245710|gb|EJR52063.1| ComE operon protein 2 [Bacillus cereus VD102]
gi|401796749|gb|AFQ10608.1| ComE operon protein 2 [Bacillus cereus FRI-35]
gi|403394827|gb|EJY92067.1| ComE operon protein 2 [Bacillus anthracis str. BF1]
Length = 185
Score = 73.2 bits (178), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 47/119 (39%), Positives = 63/119 (52%), Gaps = 10/119 (8%)
Query: 89 LEWHEYFMASAFLVAKRSKDPVTRVGAVIVNEDNKIVGTGYNGMPIG---CSDDE-FPWD 144
+ W +YFM + L++ RS VGA IV D +I+ GYNG G C DD + D
Sbjct: 4 ISWDQYFMTQSHLLSLRSTCTRLAVGATIVR-DKRIIAGGYNGSIKGGVHCIDDGCYVID 62
Query: 145 KNTHDELDMCHAEMNAILN--KNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIYMCD 201
+ + HAEMNA+L K T+ ++Y + FPC +C K IIQSGI V Y D
Sbjct: 63 NHC---VRTIHAEMNALLQCAKFGVKTEEAEIYVTHFPCLQCCKAIIQSGITAVYYAQD 118
Score = 43.1 bits (100), Expect = 0.063, Method: Compositional matrix adjust.
Identities = 26/66 (39%), Positives = 36/66 (54%), Gaps = 6/66 (9%)
Query: 1 MNAILN--KNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIYMCDKHKQKPATIASKRM 58
MNA+L K T+ ++Y + FPC +C K IIQSGI V Y D +K P + +
Sbjct: 73 MNALLQCAKFGVKTEEAEIYVTHFPCLQCCKAIIQSGITAVYYAQD-YKNHPYAV---EL 128
Query: 59 FDAAKV 64
F+ A V
Sbjct: 129 FEKANV 134
>gi|429747946|ref|ZP_19281177.1| cytidine and deoxycytidylate deaminase zinc-binding region
[Capnocytophaga sp. oral taxon 380 str. F0488]
gi|429756551|ref|ZP_19289140.1| cytidine and deoxycytidylate deaminase zinc-binding region
[Capnocytophaga sp. oral taxon 324 str. F0483]
gi|429161886|gb|EKY04252.1| cytidine and deoxycytidylate deaminase zinc-binding region
[Capnocytophaga sp. oral taxon 380 str. F0488]
gi|429171086|gb|EKY12728.1| cytidine and deoxycytidylate deaminase zinc-binding region
[Capnocytophaga sp. oral taxon 324 str. F0483]
Length = 146
Score = 73.2 bits (178), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 47/115 (40%), Positives = 66/115 (57%), Gaps = 11/115 (9%)
Query: 89 LEWHEYFMASAFLVAKRSKDPVTRVGAVIVNEDNKIVGTGYNGMPIG---CSDDEFPWDK 145
L + + +M A AK S +VGA+IV +D I+ GYNG P G C +DE +
Sbjct: 10 LRYDKAYMRMAMEWAKLSYSQRKQVGAIIV-KDRMIISDGYNGTPTGFDNCCEDE---EG 65
Query: 146 NTHDELDMCHAEMNAILNKNSA--DTKRCKLYTSLFPCNECAKVIIQSGIKEVIY 198
NTH + HAE NAI+ S+ ++ LY ++ PC EC+K+I QSGIK V+Y
Sbjct: 66 NTH--WYVLHAEANAIMKVASSTQSSEGATLYITMSPCKECSKLIYQSGIKRVVY 118
Score = 40.8 bits (94), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 19/42 (45%), Positives = 28/42 (66%), Gaps = 2/42 (4%)
Query: 2 NAILNKNSA--DTKRCKLYTSLFPCNECAKVIIQSGIKEVIY 41
NAI+ S+ ++ LY ++ PC EC+K+I QSGIK V+Y
Sbjct: 77 NAIMKVASSTQSSEGATLYITMSPCKECSKLIYQSGIKRVVY 118
>gi|423612537|ref|ZP_17588398.1| ComE operon protein 2 [Bacillus cereus VD107]
gi|401246126|gb|EJR52478.1| ComE operon protein 2 [Bacillus cereus VD107]
Length = 185
Score = 73.2 bits (178), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 47/119 (39%), Positives = 63/119 (52%), Gaps = 10/119 (8%)
Query: 89 LEWHEYFMASAFLVAKRSKDPVTRVGAVIVNEDNKIVGTGYNGMPIG---CSDDE-FPWD 144
+ W +YFM + L++ RS VGA IV D +I+ GYNG G C DD + D
Sbjct: 4 ISWDQYFMTQSHLLSLRSTCTRLAVGATIVR-DKRIIAGGYNGSIKGGVHCIDDGCYVID 62
Query: 145 KNTHDELDMCHAEMNAILN--KNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIYMCD 201
+ + HAEMNA+L K T+ ++Y + FPC +C K IIQSGI V Y D
Sbjct: 63 NHC---VRTIHAEMNALLQCAKFGVKTEEAEIYVTHFPCLQCCKAIIQSGITAVYYAQD 118
Score = 44.3 bits (103), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 27/66 (40%), Positives = 36/66 (54%), Gaps = 6/66 (9%)
Query: 1 MNAILN--KNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIYMCDKHKQKPATIASKRM 58
MNA+L K T+ ++Y + FPC +C K IIQSGI V Y D +K P I +
Sbjct: 73 MNALLQCAKFGVKTEEAEIYVTHFPCLQCCKAIIQSGITAVYYAQD-YKNHPYAI---EL 128
Query: 59 FDAAKV 64
F+ A V
Sbjct: 129 FEQANV 134
>gi|440750444|ref|ZP_20929687.1| dCMP deaminase, putative [Mariniradius saccharolyticus AK6]
gi|436481008|gb|ELP37209.1| dCMP deaminase, putative [Mariniradius saccharolyticus AK6]
Length = 177
Score = 73.2 bits (178), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 52/130 (40%), Positives = 65/130 (50%), Gaps = 17/130 (13%)
Query: 78 NGSPHKRVDDVLEWHEYFMASAFLVAKRSKDPVTRVGAVIVNEDNKIVGTGYNGMPIGCS 137
G PH DD+ FM A +AKRS VGAV+ E +I+ GYNG P G
Sbjct: 18 TGRPH--FDDI------FMELAVNLAKRSHCIKKHVGAVLTKE-TRIISIGYNGPPAGTH 68
Query: 138 --DDEFPWDKNTHDELDMC----HAEMNAILN--KNSADTKRCKLYTSLFPCNECAKVII 189
D+EFP D C HAE NAIL KN+ + LY +L PC CA++I
Sbjct: 69 NCDEEFPDTGCARDSKGSCTLALHAEQNAILYAVKNNTSVEGSTLYVTLAPCLACARIIF 128
Query: 190 QSGIKEVIYM 199
GI +V+YM
Sbjct: 129 SMGIVKVVYM 138
Score = 38.5 bits (88), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 19/43 (44%), Positives = 26/43 (60%), Gaps = 2/43 (4%)
Query: 2 NAILN--KNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIYM 42
NAIL KN+ + LY +L PC CA++I GI +V+YM
Sbjct: 96 NAILYAVKNNTSVEGSTLYVTLAPCLACARIIFSMGIVKVVYM 138
>gi|404493063|ref|YP_006717169.1| deoxycytidylate deaminase [Pelobacter carbinolicus DSM 2380]
gi|77545127|gb|ABA88689.1| deoxycytidylate deaminase [Pelobacter carbinolicus DSM 2380]
Length = 158
Score = 73.2 bits (178), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 47/121 (38%), Positives = 67/121 (55%), Gaps = 14/121 (11%)
Query: 91 WHEYFMASAFLVAKRSKDPVTRVGAVIVNEDNKIVGTGYNGMPIG---CSD-------DE 140
W EYFM A LVA+RS +VGAV+V +D I+ TGYNG P G CS+
Sbjct: 6 WEEYFMEIARLVARRSTCLRRQVGAVLV-KDKNILATGYNGTPSGLRHCSEVGCLRQLQN 64
Query: 141 FPWDKNTHDELDMCHAEMNAILN--KNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIY 198
P + H+ HAE NAI+ K+ + L+ + PC C+K+II +GI++V+Y
Sbjct: 65 VPSGER-HELCRGLHAEQNAIIQAAKHGTNISGAILFCTNTPCVICSKMIINAGIRQVVY 123
Query: 199 M 199
+
Sbjct: 124 L 124
>gi|15673123|ref|NP_267297.1| dCMP deaminase [Lactococcus lactis subsp. lactis Il1403]
gi|281491636|ref|YP_003353616.1| dCMP deaminase [Lactococcus lactis subsp. lactis KF147]
gi|385830679|ref|YP_005868492.1| dCMP deaminase [Lactococcus lactis subsp. lactis CV56]
gi|418038897|ref|ZP_12677212.1| dCMP deaminase [Lactococcus lactis subsp. cremoris CNCM I-1631]
gi|12724103|gb|AAK05239.1|AE006346_8 dCMP deaminase [Lactococcus lactis subsp. lactis Il1403]
gi|281375354|gb|ADA64867.1| dCMP deaminase [Lactococcus lactis subsp. lactis KF147]
gi|326406687|gb|ADZ63758.1| dCMP deaminase [Lactococcus lactis subsp. lactis CV56]
gi|354692753|gb|EHE92561.1| dCMP deaminase [Lactococcus lactis subsp. cremoris CNCM I-1631]
gi|374673150|dbj|BAL51041.1| dCMP deaminase [Lactococcus lactis subsp. lactis IO-1]
Length = 147
Score = 73.2 bits (178), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 44/117 (37%), Positives = 67/117 (57%), Gaps = 16/117 (13%)
Query: 93 EYFMASAFLVAKRSKDPVTRVGAVIVNEDNKIVGTGYNG----MP----IGCSDDEFPWD 144
EYF +VAKRS +VGA++V+ + +++ TGYNG MP IGC++D++
Sbjct: 13 EYFKEIVQVVAKRSTCNHAQVGALLVSPNGQLLSTGYNGAVSGMPHCTDIGCTEDKYGHC 72
Query: 145 KNTHDELDMCHAEMNAILN--KNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIYM 199
T HAE NAI K+ + LYT+LFPC C K+++ +G+KE+ Y+
Sbjct: 73 VAT------VHAEQNAIAQAAKHGVSPEGAILYTTLFPCLACLKLVVAAGVKEIKYI 123
Score = 42.0 bits (97), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 19/51 (37%), Positives = 31/51 (60%), Gaps = 2/51 (3%)
Query: 2 NAILN--KNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIYMCDKHKQKP 50
NAI K+ + LYT+LFPC C K+++ +G+KE+ Y+ + H + P
Sbjct: 81 NAIAQAAKHGVSPEGAILYTTLFPCLACLKLVVAAGVKEIKYIDEYHAKDP 131
>gi|421077224|ref|ZP_15538195.1| CMP/dCMP deaminase zinc-binding protein [Pelosinus fermentans
JBW45]
gi|392524612|gb|EIW47767.1| CMP/dCMP deaminase zinc-binding protein [Pelosinus fermentans
JBW45]
Length = 138
Score = 73.2 bits (178), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 49/112 (43%), Positives = 63/112 (56%), Gaps = 8/112 (7%)
Query: 91 WHEYFMASAFLVAKRSKDPVTRVGAVIVNEDNKIVGTGYNGMPIG---CSDDEFP-WDKN 146
W YF+ AF VA+RS +VGAVIV +D +I GTGYNG P G C DD D +
Sbjct: 5 WDLYFLDIAFQVAERSTCLRRQVGAVIV-KDKRIKGTGYNGSPAGLPHCIDDGCAMLDGH 63
Query: 147 THDELDMCHAEMNAILNKNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIY 198
+ HAE NA+L + + LY + PC EC K+II SGI +V+Y
Sbjct: 64 C---IRCIHAEPNALLECTPDERQGATLYCTDRPCPECQKLIITSGITKVVY 112
>gi|229123865|ref|ZP_04253058.1| ComE operon protein 2 [Bacillus cereus 95/8201]
gi|228659579|gb|EEL15226.1| ComE operon protein 2 [Bacillus cereus 95/8201]
Length = 188
Score = 73.2 bits (178), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 47/119 (39%), Positives = 63/119 (52%), Gaps = 10/119 (8%)
Query: 89 LEWHEYFMASAFLVAKRSKDPVTRVGAVIVNEDNKIVGTGYNGMPIG---CSDDE-FPWD 144
+ W +YFM + L++ RS VGA IV D +I+ GYNG G C DD + D
Sbjct: 7 ISWDQYFMTQSHLLSLRSTCTRLAVGATIVR-DKRIIAGGYNGSIKGGVHCIDDGCYVID 65
Query: 145 KNTHDELDMCHAEMNAILN--KNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIYMCD 201
+ + HAEMNA+L K T+ ++Y + FPC +C K IIQSGI V Y D
Sbjct: 66 NHC---VRTIHAEMNALLQCAKFGVKTEEAEIYVTHFPCLQCCKAIIQSGITAVYYAQD 121
Score = 43.1 bits (100), Expect = 0.071, Method: Compositional matrix adjust.
Identities = 26/66 (39%), Positives = 36/66 (54%), Gaps = 6/66 (9%)
Query: 1 MNAILN--KNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIYMCDKHKQKPATIASKRM 58
MNA+L K T+ ++Y + FPC +C K IIQSGI V Y D +K P + +
Sbjct: 76 MNALLQCAKFGVKTEEAEIYVTHFPCLQCCKAIIQSGITAVYYAQD-YKNHPYAV---EL 131
Query: 59 FDAAKV 64
F+ A V
Sbjct: 132 FEKANV 137
>gi|229175001|ref|ZP_04302520.1| ComE operon protein 2 [Bacillus cereus MM3]
gi|228608462|gb|EEK65765.1| ComE operon protein 2 [Bacillus cereus MM3]
Length = 188
Score = 73.2 bits (178), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 47/119 (39%), Positives = 63/119 (52%), Gaps = 10/119 (8%)
Query: 89 LEWHEYFMASAFLVAKRSKDPVTRVGAVIVNEDNKIVGTGYNGMPIG---CSDDE-FPWD 144
+ W +YFM + L++ RS VGA IV D +I+ GYNG G C DD + D
Sbjct: 7 ISWDQYFMTQSHLLSLRSTCTRLAVGATIVR-DKRIIAGGYNGSIKGGVHCIDDGCYVID 65
Query: 145 KNTHDELDMCHAEMNAILN--KNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIYMCD 201
+ + HAEMNA+L K T+ ++Y + FPC +C K IIQSGI V Y D
Sbjct: 66 NHC---VRTIHAEMNALLQCAKFGVKTEEAEIYVTHFPCLQCCKAIIQSGITAVYYAQD 121
Score = 43.1 bits (100), Expect = 0.074, Method: Compositional matrix adjust.
Identities = 26/66 (39%), Positives = 36/66 (54%), Gaps = 6/66 (9%)
Query: 1 MNAILN--KNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIYMCDKHKQKPATIASKRM 58
MNA+L K T+ ++Y + FPC +C K IIQSGI V Y D +K P + +
Sbjct: 76 MNALLQCAKFGVKTEEAEIYVTHFPCLQCCKAIIQSGITAVYYAQD-YKNHPYAV---EL 131
Query: 59 FDAAKV 64
F+ A V
Sbjct: 132 FEKADV 137
>gi|225866307|ref|YP_002751685.1| ComE operon protein 2 [Bacillus cereus 03BB102]
gi|225787758|gb|ACO27975.1| ComE operon protein 2 [Bacillus cereus 03BB102]
Length = 185
Score = 73.2 bits (178), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 47/119 (39%), Positives = 63/119 (52%), Gaps = 10/119 (8%)
Query: 89 LEWHEYFMASAFLVAKRSKDPVTRVGAVIVNEDNKIVGTGYNGMPIG---CSDDE-FPWD 144
+ W +YFM + L++ RS VGA IV D +I+ GYNG G C DD + D
Sbjct: 4 ISWDQYFMTQSHLLSLRSTCTRLAVGATIVR-DKRIIAGGYNGSIKGGVHCIDDGCYVID 62
Query: 145 KNTHDELDMCHAEMNAILN--KNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIYMCD 201
+ + HAEMNA+L K T+ ++Y + FPC +C K IIQSGI V Y D
Sbjct: 63 NHC---VRTIHAEMNALLQCAKFGVKTEEAEIYVTHFPCLQCCKAIIQSGITAVYYAQD 118
Score = 43.1 bits (100), Expect = 0.063, Method: Compositional matrix adjust.
Identities = 26/66 (39%), Positives = 36/66 (54%), Gaps = 6/66 (9%)
Query: 1 MNAILN--KNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIYMCDKHKQKPATIASKRM 58
MNA+L K T+ ++Y + FPC +C K IIQSGI V Y D +K P + +
Sbjct: 73 MNALLQCAKFGVKTEEAEIYVTHFPCLQCCKAIIQSGITAVYYAQD-YKNHPYAV---EL 128
Query: 59 FDAAKV 64
F+ A V
Sbjct: 129 FEKANV 134
>gi|118479492|ref|YP_896643.1| comE operon protein 2 [Bacillus thuringiensis str. Al Hakam]
gi|228916958|ref|ZP_04080519.1| ComE operon protein 2 [Bacillus thuringiensis serovar pulsiensis
BGSC 4CC1]
gi|228935647|ref|ZP_04098461.1| ComE operon protein 2 [Bacillus thuringiensis serovar
andalousiensis BGSC 4AW1]
gi|228948040|ref|ZP_04110325.1| ComE operon protein 2 [Bacillus thuringiensis serovar monterrey
BGSC 4AJ1]
gi|228987579|ref|ZP_04147696.1| ComE operon protein 2 [Bacillus thuringiensis serovar tochigiensis
BGSC 4Y1]
gi|229093396|ref|ZP_04224501.1| ComE operon protein 2 [Bacillus cereus Rock3-42]
gi|229141064|ref|ZP_04269606.1| ComE operon protein 2 [Bacillus cereus BDRD-ST26]
gi|229157941|ref|ZP_04286013.1| ComE operon protein 2 [Bacillus cereus ATCC 4342]
gi|229186566|ref|ZP_04313727.1| ComE operon protein 2 [Bacillus cereus BGSC 6E1]
gi|229198454|ref|ZP_04325158.1| ComE operon protein 2 [Bacillus cereus m1293]
gi|386738216|ref|YP_006211397.1| ComE operon protein 2 [Bacillus anthracis str. H9401]
gi|118418717|gb|ABK87136.1| comE operon protein 2 [Bacillus thuringiensis str. Al Hakam]
gi|228584957|gb|EEK43071.1| ComE operon protein 2 [Bacillus cereus m1293]
gi|228596825|gb|EEK54484.1| ComE operon protein 2 [Bacillus cereus BGSC 6E1]
gi|228625501|gb|EEK82256.1| ComE operon protein 2 [Bacillus cereus ATCC 4342]
gi|228642342|gb|EEK98631.1| ComE operon protein 2 [Bacillus cereus BDRD-ST26]
gi|228689990|gb|EEL43793.1| ComE operon protein 2 [Bacillus cereus Rock3-42]
gi|228772153|gb|EEM20602.1| ComE operon protein 2 [Bacillus thuringiensis serovar tochigiensis
BGSC 4Y1]
gi|228811626|gb|EEM57962.1| ComE operon protein 2 [Bacillus thuringiensis serovar monterrey
BGSC 4AJ1]
gi|228824007|gb|EEM69825.1| ComE operon protein 2 [Bacillus thuringiensis serovar
andalousiensis BGSC 4AW1]
gi|228842679|gb|EEM87766.1| ComE operon protein 2 [Bacillus thuringiensis serovar pulsiensis
BGSC 4CC1]
gi|384388068|gb|AFH85729.1| ComE operon protein 2 [Bacillus anthracis str. H9401]
Length = 188
Score = 73.2 bits (178), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 47/119 (39%), Positives = 63/119 (52%), Gaps = 10/119 (8%)
Query: 89 LEWHEYFMASAFLVAKRSKDPVTRVGAVIVNEDNKIVGTGYNGMPIG---CSDDE-FPWD 144
+ W +YFM + L++ RS VGA IV D +I+ GYNG G C DD + D
Sbjct: 7 ISWDQYFMTQSHLLSLRSTCTRLAVGATIVR-DKRIIAGGYNGSIKGGVHCIDDGCYVID 65
Query: 145 KNTHDELDMCHAEMNAILN--KNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIYMCD 201
+ + HAEMNA+L K T+ ++Y + FPC +C K IIQSGI V Y D
Sbjct: 66 NHC---VRTIHAEMNALLQCAKFGVKTEEAEIYVTHFPCLQCCKAIIQSGITAVYYAQD 121
Score = 43.1 bits (100), Expect = 0.064, Method: Compositional matrix adjust.
Identities = 26/66 (39%), Positives = 36/66 (54%), Gaps = 6/66 (9%)
Query: 1 MNAILN--KNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIYMCDKHKQKPATIASKRM 58
MNA+L K T+ ++Y + FPC +C K IIQSGI V Y D +K P + +
Sbjct: 76 MNALLQCAKFGVKTEEAEIYVTHFPCLQCCKAIIQSGITAVYYAQD-YKNHPYAV---EL 131
Query: 59 FDAAKV 64
F+ A V
Sbjct: 132 FEKANV 137
>gi|408406098|ref|YP_006864082.1| CMP/dCMP deaminase zinc-binding protein [Candidatus Nitrososphaera
gargensis Ga9.2]
gi|408366694|gb|AFU60424.1| putative CMP/dCMP deaminase zinc-binding protein [Candidatus
Nitrososphaera gargensis Ga9.2]
Length = 176
Score = 73.2 bits (178), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 46/129 (35%), Positives = 66/129 (51%), Gaps = 18/129 (13%)
Query: 90 EWHEYFMASAFLVAKRSKDPVTRVGAVIVNEDNKIVGTGYNGMPIG---CSDDEFP---- 142
+W YFM A + RS +GAVIV +DN+ + TGYNG P G C + P
Sbjct: 5 DWDTYFMLQAEIAKLRSNCLTRHIGAVIV-KDNRQIATGYNGTPPGIKNCFEGGCPRCMA 63
Query: 143 ---WDKNTHDELDMC---HAEMNAILN----KNSADTKRCKLYTSLFPCNECAKVIIQSG 192
+ + + LD C HAE NAI+ N+ T+ LY++ PC EC+K+ I G
Sbjct: 64 RLKGEIKSGEGLDRCLCTHAEANAIMQCALFGNAGSTRGATLYSTFAPCIECSKMAISVG 123
Query: 193 IKEVIYMCD 201
IK ++ + D
Sbjct: 124 IKRIVVIAD 132
Score = 38.5 bits (88), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 16/44 (36%), Positives = 25/44 (56%)
Query: 1 MNAILNKNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIYMCD 44
M L N+ T+ LY++ PC EC+K+ I GIK ++ + D
Sbjct: 89 MQCALFGNAGSTRGATLYSTFAPCIECSKMAISVGIKRIVVIAD 132
>gi|257868066|ref|ZP_05647719.1| cytidine/deoxycytidylate deaminase [Enterococcus casseliflavus
EC30]
gi|257874396|ref|ZP_05654049.1| cytidine/deoxycytidylate deaminase [Enterococcus casseliflavus
EC10]
gi|257876955|ref|ZP_05656608.1| cytidine/deoxycytidylate deaminase [Enterococcus casseliflavus
EC20]
gi|257802149|gb|EEV31052.1| cytidine/deoxycytidylate deaminase [Enterococcus casseliflavus
EC30]
gi|257808560|gb|EEV37382.1| cytidine/deoxycytidylate deaminase [Enterococcus casseliflavus
EC10]
gi|257811121|gb|EEV39941.1| cytidine/deoxycytidylate deaminase [Enterococcus casseliflavus
EC20]
Length = 165
Score = 73.2 bits (178), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 45/119 (37%), Positives = 63/119 (52%), Gaps = 10/119 (8%)
Query: 89 LEWHEYFMASAFLVAKRSKDPVTRVGAVIVNEDNKIVGTGYNGMPIGCSDDEFPWDKNTH 148
+ W +YFMA A L++ RS VGA +V +D +I+ GYNG S D D +
Sbjct: 6 IPWDQYFMAQAVLLSLRSTCSRLEVGATLV-KDRRIIAGGYNG---SVSGDVHCIDDGCY 61
Query: 149 DELDMC----HAEMNAILN--KNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIYMCD 201
D C HAEMNA+L K T ++Y + FPC C K I+Q+G+K + Y+ D
Sbjct: 62 VVDDHCIRTIHAEMNALLQCAKLGVSTDNAEIYVTHFPCLPCTKAILQAGVKTIHYLND 120
Score = 38.9 bits (89), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 19/53 (35%), Positives = 29/53 (54%), Gaps = 2/53 (3%)
Query: 1 MNAILN--KNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIYMCDKHKQKPA 51
MNA+L K T ++Y + FPC C K I+Q+G+K + Y+ D + A
Sbjct: 75 MNALLQCAKLGVSTDNAEIYVTHFPCLPCTKAILQAGVKTIHYLNDYRNNQYA 127
>gi|433462853|ref|ZP_20420424.1| ComE operon protein 2 [Halobacillus sp. BAB-2008]
gi|432188309|gb|ELK45513.1| ComE operon protein 2 [Halobacillus sp. BAB-2008]
Length = 184
Score = 73.2 bits (178), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 44/114 (38%), Positives = 64/114 (56%), Gaps = 6/114 (5%)
Query: 89 LEWHEYFMASAFLVAKRSKDPVTRVGAVIVNEDNKIVGTGYNGMPIGCSD--DEFPWDKN 146
+ W++YFM+ ++L+ RS VGAVIV D +++ GYNG G DE + +
Sbjct: 4 ITWNQYFMSQSYLLKSRSTCQRLAVGAVIVR-DKRMIAGGYNGSVSGGVHCIDEGCYVVD 62
Query: 147 THDELDMCHAEMNAILN--KNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIY 198
H + HAEMNA+L K T+ ++Y + FPC C K IIQ+GI+ V Y
Sbjct: 63 GHC-VRTIHAEMNALLQCAKFGVATENAEIYVTHFPCLHCTKAIIQAGIQAVYY 115
Score = 40.4 bits (93), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 22/55 (40%), Positives = 31/55 (56%), Gaps = 3/55 (5%)
Query: 1 MNAILN--KNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIYMCDKHKQKPATI 53
MNA+L K T+ ++Y + FPC C K IIQ+GI+ V Y D +K P +
Sbjct: 73 MNALLQCAKFGVATENAEIYVTHFPCLHCTKAIIQAGIQAVYYSED-YKNDPYAV 126
>gi|423389357|ref|ZP_17366583.1| ComE operon protein 2 [Bacillus cereus BAG1X1-3]
gi|423417749|ref|ZP_17394838.1| ComE operon protein 2 [Bacillus cereus BAG3X2-1]
gi|401106920|gb|EJQ14877.1| ComE operon protein 2 [Bacillus cereus BAG3X2-1]
gi|401641448|gb|EJS59165.1| ComE operon protein 2 [Bacillus cereus BAG1X1-3]
Length = 185
Score = 73.2 bits (178), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 47/119 (39%), Positives = 63/119 (52%), Gaps = 10/119 (8%)
Query: 89 LEWHEYFMASAFLVAKRSKDPVTRVGAVIVNEDNKIVGTGYNGMPIG---CSDDE-FPWD 144
+ W +YFM + L++ RS VGA IV D +I+ GYNG G C DD + D
Sbjct: 4 ISWDQYFMTQSHLLSLRSTCTRLAVGATIVR-DKRIIAGGYNGSIKGGVHCIDDGCYVID 62
Query: 145 KNTHDELDMCHAEMNAILN--KNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIYMCD 201
+ + HAEMNA+L K T+ ++Y + FPC +C K IIQSGI V Y D
Sbjct: 63 NHC---VRTIHAEMNALLQCAKFGVKTEESEIYVTHFPCLQCCKAIIQSGITAVYYAQD 118
Score = 43.9 bits (102), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 27/66 (40%), Positives = 36/66 (54%), Gaps = 6/66 (9%)
Query: 1 MNAILN--KNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIYMCDKHKQKPATIASKRM 58
MNA+L K T+ ++Y + FPC +C K IIQSGI V Y D +K P I +
Sbjct: 73 MNALLQCAKFGVKTEESEIYVTHFPCLQCCKAIIQSGITAVYYAQD-YKNHPYAI---EL 128
Query: 59 FDAAKV 64
F+ A V
Sbjct: 129 FEQANV 134
>gi|228929371|ref|ZP_04092394.1| ComE operon protein 2 [Bacillus thuringiensis serovar
pondicheriensis BGSC 4BA1]
gi|228830277|gb|EEM75891.1| ComE operon protein 2 [Bacillus thuringiensis serovar
pondicheriensis BGSC 4BA1]
Length = 188
Score = 73.2 bits (178), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 47/119 (39%), Positives = 63/119 (52%), Gaps = 10/119 (8%)
Query: 89 LEWHEYFMASAFLVAKRSKDPVTRVGAVIVNEDNKIVGTGYNGMPIG---CSDDE-FPWD 144
+ W +YFM + L++ RS VGA IV D +I+ GYNG G C DD + D
Sbjct: 7 ISWDQYFMTQSHLLSLRSTCTRLAVGATIVR-DKRIIAGGYNGSIKGGVHCIDDGCYVID 65
Query: 145 KNTHDELDMCHAEMNAILN--KNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIYMCD 201
+ + HAEMNA+L K T+ ++Y + FPC +C K IIQSGI V Y D
Sbjct: 66 NHC---VRTIHAEMNALLQCAKFGVKTEEAEIYVTHFPCLQCCKAIIQSGITAVYYAQD 121
Score = 43.1 bits (100), Expect = 0.070, Method: Compositional matrix adjust.
Identities = 26/66 (39%), Positives = 36/66 (54%), Gaps = 6/66 (9%)
Query: 1 MNAILN--KNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIYMCDKHKQKPATIASKRM 58
MNA+L K T+ ++Y + FPC +C K IIQSGI V Y D +K P + +
Sbjct: 76 MNALLQCAKFGVKTEEAEIYVTHFPCLQCCKAIIQSGITAVYYAQD-YKNHPYAV---EL 131
Query: 59 FDAAKV 64
F+ A V
Sbjct: 132 FEKANV 137
>gi|229019551|ref|ZP_04176367.1| ComE operon protein 2 [Bacillus cereus AH1273]
gi|229025792|ref|ZP_04182191.1| ComE operon protein 2 [Bacillus cereus AH1272]
gi|228735500|gb|EEL86096.1| ComE operon protein 2 [Bacillus cereus AH1272]
gi|228741717|gb|EEL91901.1| ComE operon protein 2 [Bacillus cereus AH1273]
Length = 185
Score = 73.2 bits (178), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 47/119 (39%), Positives = 63/119 (52%), Gaps = 10/119 (8%)
Query: 89 LEWHEYFMASAFLVAKRSKDPVTRVGAVIVNEDNKIVGTGYNGMPIG---CSDDE-FPWD 144
+ W +YFM + L++ RS VGA IV D +I+ GYNG G C DD + D
Sbjct: 4 ISWDQYFMTQSHLLSLRSTCTRLAVGATIVR-DKRIIAGGYNGSIKGGVHCIDDGCYVID 62
Query: 145 KNTHDELDMCHAEMNAILN--KNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIYMCD 201
+ + HAEMNA+L K T+ ++Y + FPC +C K IIQSGI V Y D
Sbjct: 63 NHC---VRTIHAEMNALLQCAKFGVKTEESEIYVTHFPCLQCCKAIIQSGITAVYYAQD 118
Score = 43.9 bits (102), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 27/66 (40%), Positives = 36/66 (54%), Gaps = 6/66 (9%)
Query: 1 MNAILN--KNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIYMCDKHKQKPATIASKRM 58
MNA+L K T+ ++Y + FPC +C K IIQSGI V Y D +K P I +
Sbjct: 73 MNALLQCAKFGVKTEESEIYVTHFPCLQCCKAIIQSGITAVYYAQD-YKNHPYAI---EL 128
Query: 59 FDAAKV 64
F+ A V
Sbjct: 129 FEQANV 134
>gi|410671375|ref|YP_006923746.1| CMP/dCMP deaminase zinc-binding protein [Methanolobus psychrophilus
R15]
gi|409170503|gb|AFV24378.1| CMP/dCMP deaminase zinc-binding protein [Methanolobus psychrophilus
R15]
Length = 149
Score = 73.2 bits (178), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 48/118 (40%), Positives = 63/118 (53%), Gaps = 12/118 (10%)
Query: 93 EYFMASAFLVAKRSKDPVTRVGAVIVNEDNKIVGTGYNGMP--------IGCSDDEFPWD 144
EYF+ A +VAKRS RVGAVI D +I+ TGYNG P IGC ++
Sbjct: 9 EYFLEIATVVAKRSTCLRNRVGAVIA-RDKRILSTGYNGAPRNMQHCLDIGCIREQNNIA 67
Query: 145 KNT-HDELDMCHAEMNAILNK--NSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIYM 199
T H++ HAE NAIL + T +Y + PC CAK+II + IK V+Y+
Sbjct: 68 SGTRHEKCRAVHAEQNAILQAALHGVSTDSATIYCTHQPCILCAKMIINANIKRVVYI 125
>gi|423332842|ref|ZP_17310624.1| dCMP deaminase [Lactobacillus reuteri ATCC 53608]
gi|337727960|emb|CCC03049.1| dCMP deaminase [Lactobacillus reuteri ATCC 53608]
Length = 161
Score = 73.2 bits (178), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 44/115 (38%), Positives = 65/115 (56%), Gaps = 6/115 (5%)
Query: 89 LEWHEYFMASAFLVAKRSKDPVTRVGAVIVNEDNKIVGTGYNGMPIGCSD--DEFPWDKN 146
++W +YFM A L+A RS VGAV+V D +I+ GYNG G + DE + ++
Sbjct: 5 IDWDQYFMIQAALLASRSTCNRLSVGAVLV-RDKRIIAGGYNGSVAGDAHCIDEGCYLRD 63
Query: 147 THDELDMCHAEMNAILN--KNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIYM 199
H + HAEMNA+L K +Y + FPC +C K ++Q+GIKE+ Y+
Sbjct: 64 GH-CVRTIHAEMNALLQCAKFGISADGASIYVTDFPCLQCTKSLLQTGIKEINYI 117
Score = 37.7 bits (86), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 18/48 (37%), Positives = 28/48 (58%), Gaps = 2/48 (4%)
Query: 1 MNAILN--KNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIYMCDKH 46
MNA+L K +Y + FPC +C K ++Q+GIKE+ Y+ + H
Sbjct: 74 MNALLQCAKFGISADGASIYVTDFPCLQCTKSLLQTGIKEINYIRNYH 121
>gi|256820204|ref|YP_003141483.1| zinc-binding CMP/dCMP deaminase [Capnocytophaga ochracea DSM 7271]
gi|256581787|gb|ACU92922.1| CMP/dCMP deaminase zinc-binding [Capnocytophaga ochracea DSM 7271]
Length = 146
Score = 73.2 bits (178), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 47/115 (40%), Positives = 66/115 (57%), Gaps = 11/115 (9%)
Query: 89 LEWHEYFMASAFLVAKRSKDPVTRVGAVIVNEDNKIVGTGYNGMPIG---CSDDEFPWDK 145
L + + +M A AK S +VGA+IV +D I+ GYNG P G C +DE +
Sbjct: 10 LRYDKAYMCMAMEWAKLSYSQRKQVGAIIV-KDRMIISDGYNGTPTGFDNCCEDE---EG 65
Query: 146 NTHDELDMCHAEMNAILNKNSA--DTKRCKLYTSLFPCNECAKVIIQSGIKEVIY 198
NTH + HAE NAI+ S+ ++ LY ++ PC EC+K+I QSGIK V+Y
Sbjct: 66 NTH--WYVLHAEANAIMKVASSTQSSEGATLYITMSPCKECSKLIYQSGIKRVVY 118
Score = 40.8 bits (94), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 19/42 (45%), Positives = 28/42 (66%), Gaps = 2/42 (4%)
Query: 2 NAILNKNSA--DTKRCKLYTSLFPCNECAKVIIQSGIKEVIY 41
NAI+ S+ ++ LY ++ PC EC+K+I QSGIK V+Y
Sbjct: 77 NAIMKVASSTQSSEGATLYITMSPCKECSKLIYQSGIKRVVY 118
>gi|338214764|ref|YP_004658827.1| CMP/dCMP deaminase zinc-binding protein [Runella slithyformis DSM
19594]
gi|336308593|gb|AEI51695.1| CMP/dCMP deaminase zinc-binding protein [Runella slithyformis DSM
19594]
Length = 161
Score = 73.2 bits (178), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 48/117 (41%), Positives = 63/117 (53%), Gaps = 9/117 (7%)
Query: 91 WHEYFMASAFLVAKRSKDPVTRVGAVIVNEDNKIVGTGYNGMPIGCS--DDEFPWDKNTH 148
+ + FM A +A+RS +VG+V+ +D +I+ GYNG P G DDEFP
Sbjct: 5 FDDIFMELAQNLARRSHCIKAQVGSVL-TKDTRIISIGYNGPPSGTHNCDDEFPETGCPR 63
Query: 149 DELDMC----HAEMNAILN--KNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIYM 199
D C HAE NAIL KN A+ + LY +L PC CA+VI IK VIY+
Sbjct: 64 DSKGSCSLALHAEQNAILYAVKNGANLEGTTLYVTLSPCIACARVIFTMKIKRVIYL 120
Score = 38.9 bits (89), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 21/43 (48%), Positives = 26/43 (60%), Gaps = 2/43 (4%)
Query: 2 NAILN--KNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIYM 42
NAIL KN A+ + LY +L PC CA+VI IK VIY+
Sbjct: 78 NAILYAVKNGANLEGTTLYVTLSPCIACARVIFTMKIKRVIYL 120
>gi|344996983|ref|YP_004799326.1| zinc-binding CMP/dCMP deaminase [Caldicellulosiruptor lactoaceticus
6A]
gi|343965202|gb|AEM74349.1| CMP/dCMP deaminase zinc-binding [Caldicellulosiruptor lactoaceticus
6A]
Length = 154
Score = 73.2 bits (178), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 46/119 (38%), Positives = 64/119 (53%), Gaps = 12/119 (10%)
Query: 91 WHEYFMASAFLVAKRSKDPVTRVGAVIVNEDNKIVGTGYNGMP--------IGCSDDEFP 142
W EYFM +V +RS +VGA+IV +D +I+ TGYNG P +GC ++
Sbjct: 5 WDEYFMQIVDIVKERSTCLRRKVGALIV-KDKRILATGYNGAPTGLPHCEEVGCLREKLN 63
Query: 143 WDKNTHDEL-DMCHAEMNAILN--KNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIY 198
EL HAE NAI+ K +YT+ +PC CAK+I+ +GIK+VIY
Sbjct: 64 VPSGQRHELCRGLHAEQNAIIQAAKMGVVIDGSVIYTTTYPCVICAKMIVNAGIKKVIY 122
Score = 36.6 bits (83), Expect = 6.1, Method: Compositional matrix adjust.
Identities = 14/25 (56%), Positives = 21/25 (84%)
Query: 17 LYTSLFPCNECAKVIIQSGIKEVIY 41
+YT+ +PC CAK+I+ +GIK+VIY
Sbjct: 98 IYTTTYPCVICAKMIVNAGIKKVIY 122
>gi|237845333|ref|XP_002371964.1| hypothetical protein TGME49_000420 [Toxoplasma gondii ME49]
gi|211969628|gb|EEB04824.1| hypothetical protein TGME49_000420 [Toxoplasma gondii ME49]
Length = 180
Score = 73.2 bits (178), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 44/120 (36%), Positives = 58/120 (48%), Gaps = 13/120 (10%)
Query: 90 EWHEYFMASAFLVAKRSKDPVTRVGAVIVNEDNKIVGTGYNGMPI--------GCSDDEF 141
W YFM FL + RS RVGA IV N+++ TGYNG P GC+
Sbjct: 22 SWDTYFMRLTFLASTRSNCMKRRVGA-IVARGNRVIATGYNGTPSQAANCNAGGCARCND 80
Query: 142 PWDKNTHDELDMC---HAEMNAILNKNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIY 198
P + L+ C HAE NA+L LY + PC CAK+++QS I+ V+Y
Sbjct: 81 P-SVSQGRALEACECIHAEANALLEAGRDRAMNGTLYVTCLPCLGCAKLVVQSAIRTVVY 139
>gi|149197544|ref|ZP_01874595.1| hypothetical protein LNTAR_01145 [Lentisphaera araneosa HTCC2155]
gi|149139562|gb|EDM27964.1| hypothetical protein LNTAR_01145 [Lentisphaera araneosa HTCC2155]
Length = 151
Score = 72.8 bits (177), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 46/119 (38%), Positives = 62/119 (52%), Gaps = 12/119 (10%)
Query: 91 WHEYFMASAFLVAKRSKDPVTRVGAVIVNEDNKIVGTGYNGMPIG---CSDDEFP----- 142
W +YFM A + A+RS V AVIV +D +++ TGYNG P G C D P
Sbjct: 9 WDQYFMNIAHVAAERSSCSRRHVAAVIV-KDKRVISTGYNGTPRGVKNCDDGGCPRCNSD 67
Query: 143 -WDKNTHDELDMCHAEMNAILNK--NSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIY 198
+ DE CHAE N+I+ + +YT+ PC CAK+II +GI EVI+
Sbjct: 68 VASGHGLDECLCCHAEENSIVQAACHGISINGASIYTTYSPCLLCAKMIINAGIHEVIF 126
>gi|312623042|ref|YP_004024655.1| cmp/dcmp deaminase zinc-binding protein [Caldicellulosiruptor
kronotskyensis 2002]
gi|312203509|gb|ADQ46836.1| CMP/dCMP deaminase zinc-binding protein [Caldicellulosiruptor
kronotskyensis 2002]
Length = 148
Score = 72.8 bits (177), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 46/119 (38%), Positives = 64/119 (53%), Gaps = 12/119 (10%)
Query: 91 WHEYFMASAFLVAKRSKDPVTRVGAVIVNEDNKIVGTGYNGMP--------IGCSDDEFP 142
W EYFM +V +RS +VGA+IV +D +I+ TGYNG P +GC ++
Sbjct: 5 WDEYFMQIVDIVKERSTCLRRKVGALIV-KDKRILATGYNGAPTGIPHCDEVGCLREKLN 63
Query: 143 WDKNTHDEL-DMCHAEMNAILN--KNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIY 198
EL HAE NAI+ K +YT+ +PC CAK+I+ +GIK+VIY
Sbjct: 64 VPSGQRHELCRGLHAEQNAIIQAAKMGVVIDGSVIYTTTYPCVICAKMIVNAGIKKVIY 122
Score = 36.6 bits (83), Expect = 6.6, Method: Compositional matrix adjust.
Identities = 14/25 (56%), Positives = 21/25 (84%)
Query: 17 LYTSLFPCNECAKVIIQSGIKEVIY 41
+YT+ +PC CAK+I+ +GIK+VIY
Sbjct: 98 IYTTTYPCVICAKMIVNAGIKKVIY 122
>gi|116511986|ref|YP_809202.1| deoxycytidylate deaminase [Lactococcus lactis subsp. cremoris SK11]
gi|125624228|ref|YP_001032711.1| hypothetical protein llmg_1416 [Lactococcus lactis subsp. cremoris
MG1363]
gi|385838231|ref|YP_005875861.1| dCMP deaminase, Late competence protein ComEB [Lactococcus lactis
subsp. cremoris A76]
gi|389854586|ref|YP_006356830.1| hypothetical protein LLNZ_07300 [Lactococcus lactis subsp. cremoris
NZ9000]
gi|414074302|ref|YP_006999519.1| dCMP deaminase [Lactococcus lactis subsp. cremoris UC509.9]
gi|116107640|gb|ABJ72780.1| Deoxycytidylate deaminase [Lactococcus lactis subsp. cremoris SK11]
gi|124493036|emb|CAL97999.1| conserved hypothetical protein [Lactococcus lactis subsp. cremoris
MG1363]
gi|300071008|gb|ADJ60408.1| hypothetical protein LLNZ_07300 [Lactococcus lactis subsp. cremoris
NZ9000]
gi|358749459|gb|AEU40438.1| dCMP deaminase, Late competence protein ComEB [Lactococcus lactis
subsp. cremoris A76]
gi|413974222|gb|AFW91686.1| dCMP deaminase [Lactococcus lactis subsp. cremoris UC509.9]
Length = 146
Score = 72.8 bits (177), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 44/117 (37%), Positives = 67/117 (57%), Gaps = 16/117 (13%)
Query: 93 EYFMASAFLVAKRSKDPVTRVGAVIVNEDNKIVGTGYNG----MP----IGCSDDEFPWD 144
EYF +VAKRS +VGA++V+ + +++ TGYNG MP IGC++D++
Sbjct: 12 EYFKEIVQVVAKRSTCNHAQVGALLVSPNGQLLSTGYNGAVSGMPHCTDIGCTEDKYGHC 71
Query: 145 KNTHDELDMCHAEMNAILN--KNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIYM 199
T HAE NAI K+ + LYT+LFPC C K+++ +G+KE+ Y+
Sbjct: 72 VAT------VHAEQNAIAQAAKHGVSPEGAILYTTLFPCLACLKLVVAAGVKEIKYI 122
Score = 41.6 bits (96), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 19/51 (37%), Positives = 31/51 (60%), Gaps = 2/51 (3%)
Query: 2 NAILN--KNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIYMCDKHKQKP 50
NAI K+ + LYT+LFPC C K+++ +G+KE+ Y+ + H + P
Sbjct: 80 NAIAQAAKHGVSPEGAILYTTLFPCLACLKLVVAAGVKEIKYIDEYHAKDP 130
>gi|205374270|ref|ZP_03227069.1| hypothetical protein Bcoam_14139 [Bacillus coahuilensis m4-4]
Length = 186
Score = 72.8 bits (177), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 48/115 (41%), Positives = 63/115 (54%), Gaps = 8/115 (6%)
Query: 89 LEWHEYFMASAFLVAKRSKDPVTRVGAVIVNEDNKIVGTGYNGMPIG---CSDDEFPWDK 145
+ W +YFMA + L+A RS VGA IV E I G GYNG G C D+ +
Sbjct: 4 ISWDQYFMAQSHLLALRSTCTRLAVGATIVREKRVIAG-GYNGSIAGGDHCIDNGCYVIE 62
Query: 146 NTHDELDMCHAEMNAILN--KNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIY 198
N + HAE+NAIL K T+ +LY + FPC +C K IIQ+GIK+V +
Sbjct: 63 N--HCVRTIHAEVNAILQCAKFGVPTEGAELYVTHFPCLQCCKTIIQAGIKKVYF 115
Score = 42.7 bits (99), Expect = 0.093, Method: Compositional matrix adjust.
Identities = 23/55 (41%), Positives = 33/55 (60%), Gaps = 3/55 (5%)
Query: 1 MNAILN--KNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIYMCDKHKQKPATI 53
+NAIL K T+ +LY + FPC +C K IIQ+GIK+V Y + +K P +
Sbjct: 73 VNAILQCAKFGVPTEGAELYVTHFPCLQCCKTIIQAGIKKV-YFAENYKNHPYAV 126
>gi|148543876|ref|YP_001271246.1| ComE operon protein 2 [Lactobacillus reuteri DSM 20016]
gi|184153276|ref|YP_001841617.1| dCMP deaminase [Lactobacillus reuteri JCM 1112]
gi|194468431|ref|ZP_03074417.1| ComE operon protein 2 [Lactobacillus reuteri 100-23]
gi|227364782|ref|ZP_03848831.1| competence protein ComEB [Lactobacillus reuteri MM2-3]
gi|227545004|ref|ZP_03975053.1| competence protein ComEB [Lactobacillus reuteri CF48-3A]
gi|325682591|ref|ZP_08162108.1| competence protein comEB [Lactobacillus reuteri MM4-1A]
gi|338204244|ref|YP_004650389.1| competence protein comEB [Lactobacillus reuteri SD2112]
gi|148530910|gb|ABQ82909.1| ComE operon protein 2 [Lactobacillus reuteri DSM 20016]
gi|183224620|dbj|BAG25137.1| dCMP deaminase [Lactobacillus reuteri JCM 1112]
gi|194453284|gb|EDX42182.1| ComE operon protein 2 [Lactobacillus reuteri 100-23]
gi|227070241|gb|EEI08615.1| competence protein ComEB [Lactobacillus reuteri MM2-3]
gi|227185021|gb|EEI65092.1| competence protein ComEB [Lactobacillus reuteri CF48-3A]
gi|324978430|gb|EGC15380.1| competence protein comEB [Lactobacillus reuteri MM4-1A]
gi|336449484|gb|AEI58099.1| competence protein comEB [Lactobacillus reuteri SD2112]
Length = 161
Score = 72.8 bits (177), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 44/115 (38%), Positives = 65/115 (56%), Gaps = 6/115 (5%)
Query: 89 LEWHEYFMASAFLVAKRSKDPVTRVGAVIVNEDNKIVGTGYNGMPIGCSD--DEFPWDKN 146
++W +YFM A L+A RS VGAV+V D +I+ GYNG G + DE + ++
Sbjct: 5 IDWDQYFMIQAALLASRSTCNRLSVGAVLV-RDKRIIAGGYNGSVAGDAHCIDEGCYLRD 63
Query: 147 THDELDMCHAEMNAILN--KNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIYM 199
H + HAEMNA+L K +Y + FPC +C K ++Q+GIKE+ Y+
Sbjct: 64 GH-CVRTIHAEMNALLQCAKFGISADGASIYVTDFPCLQCTKSLLQTGIKEINYI 117
Score = 37.7 bits (86), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 18/48 (37%), Positives = 28/48 (58%), Gaps = 2/48 (4%)
Query: 1 MNAILN--KNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIYMCDKH 46
MNA+L K +Y + FPC +C K ++Q+GIKE+ Y+ + H
Sbjct: 74 MNALLQCAKFGISADGASIYVTDFPCLQCTKSLLQTGIKEINYIRNYH 121
>gi|221480648|gb|EEE19095.1| deoxycytidylate deaminase, putative [Toxoplasma gondii GT1]
gi|221501404|gb|EEE27182.1| deoxycytidylate deaminase, putative [Toxoplasma gondii VEG]
Length = 180
Score = 72.8 bits (177), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 44/120 (36%), Positives = 58/120 (48%), Gaps = 13/120 (10%)
Query: 90 EWHEYFMASAFLVAKRSKDPVTRVGAVIVNEDNKIVGTGYNGMPI--------GCSDDEF 141
W YFM FL + RS RVGA IV N+++ TGYNG P GC+
Sbjct: 22 SWDTYFMRLTFLASTRSNCMKRRVGA-IVARGNRVIATGYNGTPSQAANCNAGGCARCND 80
Query: 142 PWDKNTHDELDMC---HAEMNAILNKNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIY 198
P + L+ C HAE NA+L LY + PC CAK+++QS I+ V+Y
Sbjct: 81 P-SVSQGRALEACECIHAEANALLEAGRDRAMNGTLYVTCLPCLGCAKLVVQSAIRTVVY 139
>gi|222528649|ref|YP_002572531.1| zinc-binding CMP/dCMP deaminase [Caldicellulosiruptor bescii DSM
6725]
gi|222455496|gb|ACM59758.1| CMP/dCMP deaminase zinc-binding [Caldicellulosiruptor bescii DSM
6725]
Length = 148
Score = 72.8 bits (177), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 46/119 (38%), Positives = 64/119 (53%), Gaps = 12/119 (10%)
Query: 91 WHEYFMASAFLVAKRSKDPVTRVGAVIVNEDNKIVGTGYNGMP--------IGCSDDEFP 142
W EYFM +V +RS +VGA+IV +D +I+ TGYNG P +GC ++
Sbjct: 5 WDEYFMQIVDIVKERSTCLRRKVGALIV-KDKRILATGYNGAPTGLPHCDEVGCLREKLN 63
Query: 143 WDKNTHDEL-DMCHAEMNAILN--KNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIY 198
EL HAE NAI+ K +YT+ +PC CAK+I+ +GIK+VIY
Sbjct: 64 VPSGQRHELCRGLHAEQNAIIQAAKMGVVIDGSVIYTTTYPCVICAKMIVNAGIKKVIY 122
Score = 36.6 bits (83), Expect = 6.7, Method: Compositional matrix adjust.
Identities = 14/25 (56%), Positives = 21/25 (84%)
Query: 17 LYTSLFPCNECAKVIIQSGIKEVIY 41
+YT+ +PC CAK+I+ +GIK+VIY
Sbjct: 98 IYTTTYPCVICAKMIVNAGIKKVIY 122
>gi|169829293|ref|YP_001699451.1| ComE operon protein 2 [Lysinibacillus sphaericus C3-41]
gi|168993781|gb|ACA41321.1| ComE operon protein 2 [Lysinibacillus sphaericus C3-41]
Length = 189
Score = 72.8 bits (177), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 47/119 (39%), Positives = 62/119 (52%), Gaps = 10/119 (8%)
Query: 89 LEWHEYFMASAFLVAKRSKDPVTRVGAVIVNEDNKIVGTGYNGMPIGCSDDEFPWDKNTH 148
+ W ++FMA + L+A RS VGA +V D +I+ GYNG G DE + +
Sbjct: 4 ITWDQFFMAQSHLLALRSTCTRLAVGATVVR-DKRIIAGGYNGSITG---DEHCIENGCY 59
Query: 149 DELDMC----HAEMNAILN--KNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIYMCD 201
+ C HAEMNA+L K TK LY + FPC C K IIQ+GI+ V Y D
Sbjct: 60 VVDNHCVRTVHAEMNALLQCAKYGTPTKGADLYVTHFPCLPCTKSIIQAGIERVYYATD 118
Score = 43.9 bits (102), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 27/66 (40%), Positives = 36/66 (54%), Gaps = 6/66 (9%)
Query: 1 MNAILN--KNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIYMCDKHKQKPATIASKRM 58
MNA+L K TK LY + FPC C K IIQ+GI+ V Y D +K P ++ +
Sbjct: 73 MNALLQCAKYGTPTKGADLYVTHFPCLPCTKSIIQAGIERVYYATD-YKNNP---YAQEL 128
Query: 59 FDAAKV 64
F+ A V
Sbjct: 129 FEKAGV 134
>gi|403252131|ref|ZP_10918442.1| deoxycytidylate deaminase [Thermotoga sp. EMP]
gi|402812524|gb|EJX27002.1| deoxycytidylate deaminase [Thermotoga sp. EMP]
Length = 180
Score = 72.8 bits (177), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 47/130 (36%), Positives = 69/130 (53%), Gaps = 12/130 (9%)
Query: 83 KRVDDVLEWHEYFMASAFLVAKRSKDPVTRVGAVIVNEDNKIVGTGYNGMP--------I 134
K+ D W YFM A +V++RS +VGAVIV +D++I+ TGYN P I
Sbjct: 27 KKPDSRESWDSYFMRIARMVSERSTCVHRKVGAVIV-KDHRILATGYNQPPSKFPHCNEI 85
Query: 135 GCSDDEFPWDKNTHDEL-DMCHAEMNAILN--KNSADTKRCKLYTSLFPCNECAKVIIQS 191
GC D+ + H E+ HAE NA++ K +Y + PC+ CA++I+ +
Sbjct: 86 GCIRDDLEINSGEHQEICYALHAEQNALMQAAKFGIAVNGATIYVTHKPCSICARLIVNA 145
Query: 192 GIKEVIYMCD 201
GIK V+Y D
Sbjct: 146 GIKRVVYEKD 155
>gi|329770386|ref|ZP_08261768.1| ComE operon protein 2 [Gemella sanguinis M325]
gi|328836509|gb|EGF86169.1| ComE operon protein 2 [Gemella sanguinis M325]
Length = 154
Score = 72.8 bits (177), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 49/119 (41%), Positives = 63/119 (52%), Gaps = 10/119 (8%)
Query: 89 LEWHEYFMASAFLVAKRSKDPVTRVGAVIVNEDNKIVGTGYNGMPIGCSDDEFPWDKNTH 148
+ W EYFMA + L++ RS VGA IV +D +I+ GYNG G DE D
Sbjct: 4 ISWDEYFMAQSHLLSLRSTCSRLSVGATIV-KDKRIIAGGYNGSIKG---DEHCIDVGCK 59
Query: 149 DELDMC----HAEMNAIL--NKNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIYMCD 201
C HAE+NAIL +K T+ +Y + FPC C K IIQ+GIKE+ Y D
Sbjct: 60 VIEGHCVRTIHAEINAILQCSKFGVCTEGATIYVTHFPCLNCTKSIIQAGIKEICYAND 118
Score = 38.9 bits (89), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 22/53 (41%), Positives = 30/53 (56%), Gaps = 2/53 (3%)
Query: 1 MNAIL--NKNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIYMCDKHKQKPA 51
+NAIL +K T+ +Y + FPC C K IIQ+GIKE+ Y D + A
Sbjct: 73 INAILQCSKFGVCTEGATIYVTHFPCLNCTKSIIQAGIKEICYANDYRNNEYA 125
>gi|148269654|ref|YP_001244114.1| zinc-binding CMP/dCMP deaminase [Thermotoga petrophila RKU-1]
gi|170288329|ref|YP_001738567.1| zinc-binding CMP/dCMP deaminase [Thermotoga sp. RQ2]
gi|281411636|ref|YP_003345715.1| CMP/dCMP deaminase zinc-binding protein [Thermotoga naphthophila
RKU-10]
gi|418046335|ref|ZP_12684429.1| CMP/dCMP deaminase zinc-binding [Thermotoga maritima MSB8]
gi|147735198|gb|ABQ46538.1| CMP/dCMP deaminase, zinc-binding [Thermotoga petrophila RKU-1]
gi|170175832|gb|ACB08884.1| CMP/dCMP deaminase zinc-binding [Thermotoga sp. RQ2]
gi|281372739|gb|ADA66301.1| CMP/dCMP deaminase zinc-binding protein [Thermotoga naphthophila
RKU-10]
gi|351675888|gb|EHA59048.1| CMP/dCMP deaminase zinc-binding [Thermotoga maritima MSB8]
Length = 169
Score = 72.8 bits (177), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 47/130 (36%), Positives = 69/130 (53%), Gaps = 12/130 (9%)
Query: 83 KRVDDVLEWHEYFMASAFLVAKRSKDPVTRVGAVIVNEDNKIVGTGYNGMP--------I 134
K+ D W YFM A +V++RS +VGAVIV +D++I+ TGYN P I
Sbjct: 16 KKPDSRESWDSYFMRIARMVSERSTCVHRKVGAVIV-KDHRILATGYNQPPSKFPHCNEI 74
Query: 135 GCSDDEFPWDKNTHDEL-DMCHAEMNAILN--KNSADTKRCKLYTSLFPCNECAKVIIQS 191
GC D+ + H E+ HAE NA++ K +Y + PC+ CA++I+ +
Sbjct: 75 GCIRDDLEINSGEHQEICYALHAEQNALMQAAKFGIAVNGATIYVTHKPCSICARLIVNA 134
Query: 192 GIKEVIYMCD 201
GIK V+Y D
Sbjct: 135 GIKRVVYEKD 144
>gi|312128227|ref|YP_003993101.1| cmp/dcmp deaminase zinc-binding protein [Caldicellulosiruptor
hydrothermalis 108]
gi|311778246|gb|ADQ07732.1| CMP/dCMP deaminase zinc-binding protein [Caldicellulosiruptor
hydrothermalis 108]
Length = 154
Score = 72.8 bits (177), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 46/119 (38%), Positives = 64/119 (53%), Gaps = 12/119 (10%)
Query: 91 WHEYFMASAFLVAKRSKDPVTRVGAVIVNEDNKIVGTGYNGMP--------IGCSDDEFP 142
W EYFM +V +RS +VGA+IV +D +I+ TGYNG P +GC ++
Sbjct: 5 WDEYFMQIVDIVKERSTCLRRKVGALIV-KDKRILATGYNGAPTGLPHCEEVGCLREKLN 63
Query: 143 WDKNTHDEL-DMCHAEMNAILN--KNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIY 198
EL HAE NAI+ K +YT+ +PC CAK+I+ +GIK+VIY
Sbjct: 64 VPSGQRHELCRGLHAEQNAIIQAAKMGVVIDGSVIYTTTYPCVICAKMIVNAGIKKVIY 122
Score = 36.6 bits (83), Expect = 6.3, Method: Compositional matrix adjust.
Identities = 14/25 (56%), Positives = 21/25 (84%)
Query: 17 LYTSLFPCNECAKVIIQSGIKEVIY 41
+YT+ +PC CAK+I+ +GIK+VIY
Sbjct: 98 IYTTTYPCVICAKMIVNAGIKKVIY 122
>gi|149013222|ref|ZP_01834008.1| transcriptional regulator, TetR family protein [Streptococcus
pneumoniae SP19-BS75]
gi|147762973|gb|EDK69918.1| transcriptional regulator, TetR family protein [Streptococcus
pneumoniae SP19-BS75]
Length = 346
Score = 72.8 bits (177), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 47/121 (38%), Positives = 64/121 (52%), Gaps = 9/121 (7%)
Query: 89 LEWHEYFMASAFLVAKRSKDPVTRVGAVIVNEDNKIVGTGYNGMPIG---CSDDE-FPWD 144
L W EYF A A L+A RS +VGA++V +DNK++ TGYNG G C D E +
Sbjct: 197 LAWDEYFAAQALLIANRSTCKRAKVGAILV-KDNKVISTGYNGSVSGTEHCIDHECLVIE 255
Query: 145 KNTHDELDMCHAEMNAILNKNSADT-KRCKLYTSLFPCNECAKVIIQSGIKEVIYMCDKQ 203
+ + HAE+NAIL K Y + FPC C K ++Q G K V+Y+ +
Sbjct: 256 GHC---VRTLHAEVNAILQGAERGVPKGFTAYVTHFPCLNCTKQLLQVGCKRVVYINQYR 312
Query: 204 M 204
M
Sbjct: 313 M 313
>gi|302871258|ref|YP_003839894.1| zinc-binding CMP/dCMP deaminase [Caldicellulosiruptor obsidiansis
OB47]
gi|302574117|gb|ADL41908.1| CMP/dCMP deaminase zinc-binding [Caldicellulosiruptor obsidiansis
OB47]
Length = 154
Score = 72.8 bits (177), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 46/119 (38%), Positives = 64/119 (53%), Gaps = 12/119 (10%)
Query: 91 WHEYFMASAFLVAKRSKDPVTRVGAVIVNEDNKIVGTGYNGMP--------IGCSDDEFP 142
W EYFM +V +RS +VGA+IV +D +I+ TGYNG P +GC ++
Sbjct: 5 WDEYFMQIVDIVKERSTCLRRKVGALIV-KDKRILATGYNGAPMGLPHCEEVGCVREKLN 63
Query: 143 WDKNTHDEL-DMCHAEMNAILN--KNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIY 198
EL HAE NAI+ K +YT+ +PC CAK+I+ +GIK+VIY
Sbjct: 64 IPSGQRHELCRGLHAEQNAIIQAAKMGVVIDGSIIYTTTYPCVICAKMIVNAGIKKVIY 122
Score = 37.4 bits (85), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 19/49 (38%), Positives = 30/49 (61%), Gaps = 5/49 (10%)
Query: 17 LYTSLFPCNECAKVIIQSGIKEVIYMCDKHKQKPATIASKRMFDAAKVH 65
+YT+ +PC CAK+I+ +GIK+VIY K S+++FD A +
Sbjct: 98 IYTTTYPCVICAKMIVNAGIKKVIY-----KGSYPDEMSQKIFDEAGIE 141
>gi|312792827|ref|YP_004025750.1| cmp/dcmp deaminase zinc-binding protein [Caldicellulosiruptor
kristjanssonii 177R1B]
gi|312179967|gb|ADQ40137.1| CMP/dCMP deaminase zinc-binding protein [Caldicellulosiruptor
kristjanssonii 177R1B]
Length = 154
Score = 72.8 bits (177), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 46/119 (38%), Positives = 64/119 (53%), Gaps = 12/119 (10%)
Query: 91 WHEYFMASAFLVAKRSKDPVTRVGAVIVNEDNKIVGTGYNGMP--------IGCSDDEFP 142
W EYFM +V +RS +VGA+IV +D +I+ TGYNG P +GC ++
Sbjct: 5 WDEYFMQIVDIVKERSTCLRRKVGALIV-KDKRILATGYNGAPTGLPHCEEVGCLREKLN 63
Query: 143 WDKNTHDEL-DMCHAEMNAILN--KNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIY 198
EL HAE NAI+ K +YT+ +PC CAK+I+ +GIK+VIY
Sbjct: 64 VPSGQRHELCRGLHAEQNAIIQAAKMGVVIDGSVIYTTTYPCVICAKMIVNAGIKKVIY 122
Score = 36.6 bits (83), Expect = 6.3, Method: Compositional matrix adjust.
Identities = 14/25 (56%), Positives = 21/25 (84%)
Query: 17 LYTSLFPCNECAKVIIQSGIKEVIY 41
+YT+ +PC CAK+I+ +GIK+VIY
Sbjct: 98 IYTTTYPCVICAKMIVNAGIKKVIY 122
>gi|345020320|ref|ZP_08783933.1| late competence protein [Ornithinibacillus scapharcae TW25]
Length = 186
Score = 72.8 bits (177), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 47/119 (39%), Positives = 64/119 (53%), Gaps = 10/119 (8%)
Query: 89 LEWHEYFMASAFLVAKRSKDPVTRVGAVIVNEDNKIVGTGYNGMPIG---CSDDE-FPWD 144
+ W++YFMA + L++ RS VGA IV D +I+ GYNG G C DD + D
Sbjct: 4 ISWNQYFMAQSHLLSLRSTCTRLMVGATIVR-DKRIIAGGYNGSVTGSVHCIDDGCYVID 62
Query: 145 KNTHDELDMCHAEMNAILN--KNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIYMCD 201
+ + HAE NA+L K T+ +Y + FPC +C K +IQSGIK V Y D
Sbjct: 63 GHC---VRTVHAEANALLQCAKFGVPTENADVYVTHFPCLQCTKQLIQSGIKTVYYAED 118
Score = 41.2 bits (95), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 26/65 (40%), Positives = 36/65 (55%), Gaps = 6/65 (9%)
Query: 2 NAILN--KNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIYMCDKHKQKPATIASKRMF 59
NA+L K T+ +Y + FPC +C K +IQSGIK V Y D +K P I ++F
Sbjct: 74 NALLQCAKFGVPTENADVYVTHFPCLQCTKQLIQSGIKTVYYAED-YKNHPYAI---QLF 129
Query: 60 DAAKV 64
+ A V
Sbjct: 130 EEAGV 134
>gi|334342205|ref|YP_004547185.1| dCMP deaminase [Desulfotomaculum ruminis DSM 2154]
gi|334093559|gb|AEG61899.1| dCMP deaminase [Desulfotomaculum ruminis DSM 2154]
Length = 149
Score = 72.8 bits (177), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 46/122 (37%), Positives = 63/122 (51%), Gaps = 12/122 (9%)
Query: 91 WHEYFMASAFLVAKRSKDPVTRVGAVIVNEDNKIVGTGYNGMPIG--------CSDDEFP 142
W EYFM +VA RS +VGA IV +DN+I+ TGYNG P G C ++
Sbjct: 5 WEEYFMQITQVVASRSTCLRRKVGAAIV-KDNRILATGYNGAPAGLAHCMERGCLREKLG 63
Query: 143 WDKNTHDEL-DMCHAEMNAILNKNSADT--KRCKLYTSLFPCNECAKVIIQSGIKEVIYM 199
EL HAE NAI+ T + +Y + PC C+K+I+ +GIK+VI+
Sbjct: 64 IPSGQRHELCRALHAEQNAIIQAAVHGTAIQGSMIYVTTQPCVMCSKMIVNAGIKKVIFA 123
Query: 200 CD 201
D
Sbjct: 124 GD 125
>gi|325104661|ref|YP_004274315.1| CMP/dCMP deaminase zinc-binding protein [Pedobacter saltans DSM
12145]
gi|324973509|gb|ADY52493.1| CMP/dCMP deaminase zinc-binding protein [Pedobacter saltans DSM
12145]
Length = 157
Score = 72.8 bits (177), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 47/118 (39%), Positives = 65/118 (55%), Gaps = 9/118 (7%)
Query: 89 LEWHEYFMASAFLVAKRSKDPVTRVGAVIVNEDNKIVGTGYNGMPIGCS--DDEFPWDKN 146
L + + FM A +A++S VGAV+ +D +I+ GYNG P G D+E+P +
Sbjct: 3 LSFDQIFMNLASDLAQKSHCVKNHVGAVLT-KDTRIISIGYNGPPAGTHNCDEEWPEEGC 61
Query: 147 THDELDMC----HAEMNAILN--KNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIY 198
D + C HAE NAIL KN A + LYT+L PC CA++I SGI+ V Y
Sbjct: 62 PRDSKNSCSLALHAEENAILYAVKNGAQIQGATLYTTLSPCISCARLIYASGIQRVFY 119
Score = 40.8 bits (94), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 21/42 (50%), Positives = 26/42 (61%), Gaps = 2/42 (4%)
Query: 2 NAILN--KNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIY 41
NAIL KN A + LYT+L PC CA++I SGI+ V Y
Sbjct: 78 NAILYAVKNGAQIQGATLYTTLSPCISCARLIYASGIQRVFY 119
>gi|422848336|ref|ZP_16895012.1| cytidine and deoxycytidylate deaminase [Streptococcus sanguinis
SK115]
gi|325690868|gb|EGD32869.1| cytidine and deoxycytidylate deaminase [Streptococcus sanguinis
SK115]
Length = 155
Score = 72.8 bits (177), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 48/116 (41%), Positives = 62/116 (53%), Gaps = 9/116 (7%)
Query: 89 LEWHEYFMASAFLVAKRSKDPVTRVGAVIVNEDNKIVGTGYNGMPIG---CSD-DEFPWD 144
L W +YF A A L+A RS +VGAV+V +DNK++ TGYNG G C D D D
Sbjct: 6 LAWDQYFAAQALLIANRSTCKRAKVGAVLV-KDNKVISTGYNGSVSGTEHCIDHDCLVID 64
Query: 145 KNTHDELDMCHAEMNAILNKNSADT-KRCKLYTSLFPCNECAKVIIQSGIKEVIYM 199
+ L HAE+NAIL K Y + FPC C K ++Q G K V+Y+
Sbjct: 65 GHCVRTL---HAEVNAILQGAERGVPKGFTAYVTHFPCLNCTKQLLQVGCKRVVYI 117
>gi|312134555|ref|YP_004001893.1| cmp/dcmp deaminase zinc-binding protein [Caldicellulosiruptor
owensensis OL]
gi|311774606|gb|ADQ04093.1| CMP/dCMP deaminase zinc-binding protein [Caldicellulosiruptor
owensensis OL]
Length = 154
Score = 72.8 bits (177), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 46/119 (38%), Positives = 64/119 (53%), Gaps = 12/119 (10%)
Query: 91 WHEYFMASAFLVAKRSKDPVTRVGAVIVNEDNKIVGTGYNGMP--------IGCSDDEFP 142
W EYFM +V +RS +VGA+IV +D +I+ TGYNG P +GC ++
Sbjct: 5 WDEYFMQIVDIVKERSTCLRRKVGALIV-KDKRILATGYNGAPTGLPHCEEVGCLREKLN 63
Query: 143 WDKNTHDEL-DMCHAEMNAILN--KNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIY 198
EL HAE NAI+ K +YT+ +PC CAK+I+ +GIK+VIY
Sbjct: 64 VPSGQRHELCRGLHAEQNAIIQAAKMGVVIDGSVIYTTTYPCVICAKMIVNAGIKKVIY 122
Score = 36.6 bits (83), Expect = 6.7, Method: Compositional matrix adjust.
Identities = 14/25 (56%), Positives = 21/25 (84%)
Query: 17 LYTSLFPCNECAKVIIQSGIKEVIY 41
+YT+ +PC CAK+I+ +GIK+VIY
Sbjct: 98 IYTTTYPCVICAKMIVNAGIKKVIY 122
>gi|260892001|ref|YP_003238098.1| CMP/dCMP deaminase zinc-binding protein [Ammonifex degensii KC4]
gi|260864142|gb|ACX51248.1| CMP/dCMP deaminase zinc-binding protein [Ammonifex degensii KC4]
Length = 162
Score = 72.8 bits (177), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 46/121 (38%), Positives = 62/121 (51%), Gaps = 12/121 (9%)
Query: 90 EWHEYFMASAFLVAKRSKDPVTRVGAVIVNEDNKIVGTGYNGMP--------IGCSDDEF 141
+W YFM A +V+ RS +VGA + DN+I+ TGYNG P IGC +E
Sbjct: 4 DWDTYFMTVAKVVSLRSTCLRRQVGACLTR-DNRILATGYNGAPSGLKHCLEIGCLREEK 62
Query: 142 PWDKNTHDEL-DMCHAEMNAILNKN--SADTKRCKLYTSLFPCNECAKVIIQSGIKEVIY 198
EL HAE NA+L LYT+ FPC CAK++IQ+ I+ V+Y
Sbjct: 63 GIPSGERHELCRGLHAEQNALLQAAVYGVSIAGATLYTTHFPCALCAKMLIQARIERVVY 122
Query: 199 M 199
+
Sbjct: 123 L 123
>gi|326799622|ref|YP_004317441.1| zinc-binding CMP/dCMP deaminase [Sphingobacterium sp. 21]
gi|326550386|gb|ADZ78771.1| CMP/dCMP deaminase zinc-binding protein [Sphingobacterium sp. 21]
Length = 149
Score = 72.8 bits (177), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 47/116 (40%), Positives = 63/116 (54%), Gaps = 9/116 (7%)
Query: 91 WHEYFMASAFLVAKRSKDPVTRVGAVIVNEDNKIVGTGYNGMPIGCS--DDEFPWDKNTH 148
+ E FM A +A+RS VGAV+ +D +I+ GYNG P G D E+P +
Sbjct: 6 FDEIFMNLALELAERSHCVKAHVGAVLA-KDTRIISIGYNGPPSGTHNCDQEWPLEGCAR 64
Query: 149 DELDMC----HAEMNAILN--KNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIY 198
D C HAE NAIL KN A + LYT+L PC CA++I +GI +V+Y
Sbjct: 65 DSKGSCSLALHAEENAILYAVKNGAGLQGATLYTTLSPCLPCARLIYSAGIVKVLY 120
Score = 39.3 bits (90), Expect = 0.95, Method: Compositional matrix adjust.
Identities = 20/42 (47%), Positives = 27/42 (64%), Gaps = 2/42 (4%)
Query: 2 NAILN--KNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIY 41
NAIL KN A + LYT+L PC CA++I +GI +V+Y
Sbjct: 79 NAILYAVKNGAGLQGATLYTTLSPCLPCARLIYSAGIVKVLY 120
>gi|427392396|ref|ZP_18886401.1| ComE operon protein 2 [Alloiococcus otitis ATCC 51267]
gi|425731357|gb|EKU94175.1| ComE operon protein 2 [Alloiococcus otitis ATCC 51267]
Length = 159
Score = 72.8 bits (177), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 45/119 (37%), Positives = 65/119 (54%), Gaps = 10/119 (8%)
Query: 89 LEWHEYFMASAFLVAKRSKDPVTRVGAVIVNEDNKIVGTGYNGMPIGCSDDEFPWDKNTH 148
+ W +YFMA + L++ RS VGA IV +D +++ GYNG S + D +
Sbjct: 6 IPWDQYFMAQSILISMRSTCQRLAVGATIV-KDKRVISGGYNG---SVSGEPHCIDVGCY 61
Query: 149 DELDMC----HAEMNAIL--NKNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIYMCD 201
E C HAE NAIL +K + T +Y + FPC +C K +IQ+GIKE+ Y+ D
Sbjct: 62 IEDGHCLRTIHAEENAILQCSKFGSSTDGAAIYVTHFPCLQCTKHLIQAGIKEIYYLKD 120
Score = 48.5 bits (114), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 31/85 (36%), Positives = 45/85 (52%), Gaps = 9/85 (10%)
Query: 2 NAIL--NKNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIYMCDKHKQKPATIASKRMF 59
NAIL +K + T +Y + FPC +C K +IQ+GIKE+ Y+ D H A +
Sbjct: 76 NAILQCSKFGSSTDGAAIYVTHFPCLQCTKHLIQAGIKEIYYLKDYHNHPYAM----ELI 131
Query: 60 DAAKVHYWS-EMDK--MNGVQNGSP 81
D A +H EMD N +Q+ +P
Sbjct: 132 DHAGIHLKKVEMDDQVFNAIQSFTP 156
>gi|322387410|ref|ZP_08061020.1| cytidine and deoxycytidylate deaminase [Streptococcus infantis ATCC
700779]
gi|321141939|gb|EFX37434.1| cytidine and deoxycytidylate deaminase [Streptococcus infantis ATCC
700779]
Length = 160
Score = 72.8 bits (177), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 49/124 (39%), Positives = 65/124 (52%), Gaps = 15/124 (12%)
Query: 89 LEWHEYFMASAFLVAKRSKDPVTRVGAVIVNEDNKIVGTGYNGMPIGCSDDEFPWDKNTH 148
L W EYF A A L+A RS +VGAV+V +DNK++ TGYNG S E D H
Sbjct: 11 LAWDEYFAAQALLIANRSTCKRAKVGAVLV-KDNKVISTGYNG---SVSGTEHCID---H 63
Query: 149 DELDM-------CHAEMNAILNKNSADT-KRCKLYTSLFPCNECAKVIIQSGIKEVIYMC 200
D L + HAE+NAIL + K Y + FPC C K ++Q G + V+Y+
Sbjct: 64 DCLVIEGHCVRTLHAEVNAILQGSERGVPKGFTAYVTHFPCLNCTKQLLQVGCERVVYIN 123
Query: 201 DKQM 204
+M
Sbjct: 124 QYRM 127
>gi|381182521|ref|ZP_09891323.1| hypothetical protein KKC_04361 [Listeriaceae bacterium TTU M1-001]
gi|380317571|gb|EIA20888.1| hypothetical protein KKC_04361 [Listeriaceae bacterium TTU M1-001]
Length = 186
Score = 72.8 bits (177), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 47/119 (39%), Positives = 64/119 (53%), Gaps = 10/119 (8%)
Query: 89 LEWHEYFMASAFLVAKRSKDPVTRVGAVIVNEDNKIVGTGYNGMPIG---CSDDE-FPWD 144
+ W ++FMA + L++ RS VGA IV D +I+ GYNG G C++ D
Sbjct: 4 IAWDQFFMAQSHLISSRSTCTRLMVGATIVR-DKRIIAGGYNGSIAGGDHCAEHGCLVVD 62
Query: 145 KNTHDELDMCHAEMNAILN--KNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIYMCD 201
+ + HAEMNAIL K A T + ++Y + FPC C K IIQ+GIK V Y D
Sbjct: 63 GHC---IRTIHAEMNAILQCAKFGASTDKAEMYVTHFPCVACCKSIIQAGIKTVCYAED 118
Score = 45.1 bits (105), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 29/66 (43%), Positives = 37/66 (56%), Gaps = 6/66 (9%)
Query: 1 MNAILN--KNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIYMCDKHKQKPATIASKRM 58
MNAIL K A T + ++Y + FPC C K IIQ+GIK V Y D +K P I +
Sbjct: 73 MNAILQCAKFGASTDKAEMYVTHFPCVACCKSIIQAGIKTVCYAED-YKNHPYAI---EL 128
Query: 59 FDAAKV 64
F+ A V
Sbjct: 129 FEQAGV 134
>gi|406838696|ref|ZP_11098290.1| ComE operon protein 2 [Lactobacillus vini DSM 20605]
Length = 156
Score = 72.4 bits (176), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 43/117 (36%), Positives = 66/117 (56%), Gaps = 10/117 (8%)
Query: 89 LEWHEYFMASAFLVAKRSKDPVTRVGAVIVNEDNKIVGTGYNGMPIG---CSDDE-FPWD 144
+ W++YFM A L++ RS VGA++V D +I+ GYNG G C D+ + D
Sbjct: 5 IPWNQYFMMQAVLLSLRSTCERLSVGAILV-RDRRIIAGGYNGSVSGDVHCIDEGCYLVD 63
Query: 145 KNTHDELDMCHAEMNAILN--KNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIYM 199
+ L HAEMNA+L K T ++Y + FPC +C K+++Q+GIK++ Y
Sbjct: 64 GHC---LRTIHAEMNAVLQCAKFGIATANAEIYVTDFPCLQCTKMLLQAGIKKIYYF 117
Score = 39.7 bits (91), Expect = 0.68, Method: Compositional matrix adjust.
Identities = 18/48 (37%), Positives = 30/48 (62%), Gaps = 2/48 (4%)
Query: 1 MNAILN--KNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIYMCDKH 46
MNA+L K T ++Y + FPC +C K+++Q+GIK++ Y + H
Sbjct: 74 MNAVLQCAKFGIATANAEIYVTDFPCLQCTKMLLQAGIKKIYYFRNYH 121
>gi|403339404|gb|EJY68960.1| Deoxycytidylate deaminase [Oxytricha trifallax]
Length = 377
Score = 72.4 bits (176), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 49/121 (40%), Positives = 62/121 (51%), Gaps = 18/121 (14%)
Query: 91 WHEYFMASAFLVAKRSKDPVTRVGAVIVNEDNKIVGTGYNGMPI--------GCSDDEFP 142
W YFM A L A+RS GA+IV +D +IV TGYNG P GC
Sbjct: 237 WDTYFMKFAELAAQRSNCMKRGNGAIIV-KDFRIVSTGYNGTPFKHLNCNEGGCR----R 291
Query: 143 WDKNTHD--ELDMC---HAEMNAILNKNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVI 197
+ N ELD C HAE +A++ T +YT+ FPC C K+IIQ+GIK V+
Sbjct: 292 CNSNVAQGLELDKCKCLHAEESAVIEAGRPRTLDSTIYTTSFPCLLCTKIIIQAGIKRVV 351
Query: 198 Y 198
Y
Sbjct: 352 Y 352
Score = 40.4 bits (93), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 17/40 (42%), Positives = 25/40 (62%)
Query: 2 NAILNKNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIY 41
+A++ T +YT+ FPC C K+IIQ+GIK V+Y
Sbjct: 313 SAVIEAGRPRTLDSTIYTTSFPCLLCTKIIIQAGIKRVVY 352
>gi|417938041|ref|ZP_12581339.1| putative ComE operon protein 2 [Streptococcus infantis SK970]
gi|343391131|gb|EGV03706.1| putative ComE operon protein 2 [Streptococcus infantis SK970]
Length = 155
Score = 72.4 bits (176), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 49/124 (39%), Positives = 64/124 (51%), Gaps = 15/124 (12%)
Query: 89 LEWHEYFMASAFLVAKRSKDPVTRVGAVIVNEDNKIVGTGYNGMPIGCSDDEFPWDKNTH 148
L W EYF A A L+A RS RVGAV+V +DN+++ TGYNG S E D H
Sbjct: 6 LAWDEYFAAQALLIANRSTCKRARVGAVLV-KDNRVISTGYNG---SVSGTEHCID---H 58
Query: 149 DELDM-------CHAEMNAILNKNSADT-KRCKLYTSLFPCNECAKVIIQSGIKEVIYMC 200
D L + HAE+NAIL K Y + FPC C K ++Q G + V+Y+
Sbjct: 59 DCLVIEGHCVRTLHAEVNAILQGAERGVPKGFTAYVTHFPCLNCTKQLLQVGCERVVYIN 118
Query: 201 DKQM 204
+M
Sbjct: 119 QYRM 122
>gi|294494911|ref|YP_003541404.1| CMP/dCMP deaminase zinc-binding protein [Methanohalophilus mahii
DSM 5219]
gi|292665910|gb|ADE35759.1| CMP/dCMP deaminase zinc-binding protein [Methanohalophilus mahii
DSM 5219]
Length = 156
Score = 72.4 bits (176), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 48/118 (40%), Positives = 64/118 (54%), Gaps = 12/118 (10%)
Query: 93 EYFMASAFLVAKRSKDPVTRVGAVIVNEDNKIVGTGYNGMP--------IGCSDDEFPWD 144
EYF+ A ++AKRS RVGAVIV D +I+ TGYNG P IGC + +
Sbjct: 9 EYFLEIATVIAKRSTCLRNRVGAVIV-RDKQILSTGYNGAPSNMEHCLDIGCIRQKNNIE 67
Query: 145 KNT-HDELDMCHAEMNAILNK--NSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIYM 199
T H++ HAE NAI+ + A + LY + PC C K+II S IK V+Y+
Sbjct: 68 SGTRHEKCRAVHAEQNAIIQAALHGAGIEGATLYCTHQPCILCTKMIINSRIKRVVYL 125
>gi|126701100|ref|YP_001089997.1| dCMP deaminase [Clostridium difficile 630]
gi|254977101|ref|ZP_05273573.1| putative cytidine and deoxycytidylate deaminase [Clostridium
difficile QCD-66c26]
gi|255094429|ref|ZP_05323907.1| putative cytidine and deoxycytidylate deaminase [Clostridium
difficile CIP 107932]
gi|255102686|ref|ZP_05331663.1| putative cytidine and deoxycytidylate deaminase [Clostridium
difficile QCD-63q42]
gi|255308507|ref|ZP_05352678.1| putative cytidine and deoxycytidylate deaminase [Clostridium
difficile ATCC 43255]
gi|255316181|ref|ZP_05357764.1| putative cytidine and deoxycytidylate deaminase [Clostridium
difficile QCD-76w55]
gi|255518842|ref|ZP_05386518.1| putative cytidine and deoxycytidylate deaminase [Clostridium
difficile QCD-97b34]
gi|255652021|ref|ZP_05398923.1| putative cytidine and deoxycytidylate deaminase [Clostridium
difficile QCD-37x79]
gi|255657431|ref|ZP_05402840.1| putative cytidine and deoxycytidylate deaminase [Clostridium
difficile QCD-23m63]
gi|260684996|ref|YP_003216281.1| cytidine and deoxycytidylate deaminase [Clostridium difficile
CD196]
gi|260688654|ref|YP_003219788.1| cytidine and deoxycytidylate deaminase [Clostridium difficile
R20291]
gi|296449027|ref|ZP_06890817.1| cytidine/deoxycytidylate deaminase [Clostridium difficile NAP08]
gi|296879850|ref|ZP_06903823.1| cytidine/deoxycytidylate deaminase [Clostridium difficile NAP07]
gi|306521763|ref|ZP_07408110.1| putative cytidine and deoxycytidylate deaminase [Clostridium
difficile QCD-32g58]
gi|384362670|ref|YP_006200522.1| cytidine and deoxycytidylate deaminase [Clostridium difficile BI1]
gi|423080805|ref|ZP_17069422.1| cytidine and deoxycytidylate deaminase zinc-binding region
[Clostridium difficile 002-P50-2011]
gi|423087206|ref|ZP_17075595.1| cytidine and deoxycytidylate deaminase zinc-binding region
[Clostridium difficile 050-P50-2011]
gi|423090575|ref|ZP_17078864.1| cytidine and deoxycytidylate deaminase zinc-binding region
[Clostridium difficile 70-100-2010]
gi|115252537|emb|CAJ70380.1| putative dCMP deaminase [Clostridium difficile 630]
gi|260211159|emb|CBA66608.1| putative cytidine and deoxycytidylate deaminase [Clostridium
difficile CD196]
gi|260214671|emb|CBE07302.1| putative cytidine and deoxycytidylate deaminase [Clostridium
difficile R20291]
gi|296262120|gb|EFH08925.1| cytidine/deoxycytidylate deaminase [Clostridium difficile NAP08]
gi|296429139|gb|EFH15013.1| cytidine/deoxycytidylate deaminase [Clostridium difficile NAP07]
gi|357545145|gb|EHJ27125.1| cytidine and deoxycytidylate deaminase zinc-binding region
[Clostridium difficile 050-P50-2011]
gi|357552295|gb|EHJ34069.1| cytidine and deoxycytidylate deaminase zinc-binding region
[Clostridium difficile 002-P50-2011]
gi|357556280|gb|EHJ37895.1| cytidine and deoxycytidylate deaminase zinc-binding region
[Clostridium difficile 70-100-2010]
Length = 145
Score = 72.4 bits (176), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 49/122 (40%), Positives = 60/122 (49%), Gaps = 12/122 (9%)
Query: 91 WHEYFMASAFLVAKRSKDPVTRVGAVIVNEDNKIVGTGYNGMP--------IGCSDDEFP 142
W EYFM A +V KRS +VGAVIV D +I+ TGYNG P IGC E
Sbjct: 5 WDEYFMEIAEVVKKRSTCIRRQVGAVIVR-DKQILTTGYNGSPRNLEHCENIGCKRQELN 63
Query: 143 WDKNTHDEL-DMCHAEMNAILNK--NSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIYM 199
EL HAE NAI+ N LY + PC CAK+ I +GI +++Y
Sbjct: 64 IPSGERHELCRALHAEQNAIIQAAHNGISVDGATLYVTTRPCVLCAKMCINAGILKIVYE 123
Query: 200 CD 201
D
Sbjct: 124 GD 125
>gi|419842631|ref|ZP_14365968.1| putative ComE operon protein 2 [Streptococcus infantis ATCC 700779]
gi|385703576|gb|EIG40689.1| putative ComE operon protein 2 [Streptococcus infantis ATCC 700779]
Length = 155
Score = 72.4 bits (176), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 49/124 (39%), Positives = 65/124 (52%), Gaps = 15/124 (12%)
Query: 89 LEWHEYFMASAFLVAKRSKDPVTRVGAVIVNEDNKIVGTGYNGMPIGCSDDEFPWDKNTH 148
L W EYF A A L+A RS +VGAV+V +DNK++ TGYNG S E D H
Sbjct: 6 LAWDEYFAAQALLIANRSTCKRAKVGAVLV-KDNKVISTGYNG---SVSGTEHCID---H 58
Query: 149 DELDM-------CHAEMNAILNKNSADT-KRCKLYTSLFPCNECAKVIIQSGIKEVIYMC 200
D L + HAE+NAIL + K Y + FPC C K ++Q G + V+Y+
Sbjct: 59 DCLVIEGHCVRTLHAEVNAILQGSERGVPKGFTAYVTHFPCLNCTKQLLQVGCERVVYIN 118
Query: 201 DKQM 204
+M
Sbjct: 119 QYRM 122
>gi|339641017|ref|ZP_08662461.1| putative ComE operon protein 2 [Streptococcus sp. oral taxon 056
str. F0418]
gi|339454286|gb|EGP66901.1| putative ComE operon protein 2 [Streptococcus sp. oral taxon 056
str. F0418]
Length = 155
Score = 72.4 bits (176), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 49/121 (40%), Positives = 63/121 (52%), Gaps = 9/121 (7%)
Query: 89 LEWHEYFMASAFLVAKRSKDPVTRVGAVIVNEDNKIVGTGYNGMPIG---CSD-DEFPWD 144
L W EYF A A L+A RS RVG V+V + NK++ TGYNG G C D D D
Sbjct: 6 LAWDEYFAAQALLIANRSTCKRARVGTVLV-QGNKVISTGYNGSVSGTEHCIDHDCLVID 64
Query: 145 KNTHDELDMCHAEMNAIL-NKNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIYMCDKQ 203
+ L HAE+NAIL K Y + FPC C K ++Q G K V+Y+ + +
Sbjct: 65 GHCVRTL---HAEVNAILQGAERGIPKDFTAYVTHFPCLNCTKQLLQVGCKRVVYINEYR 121
Query: 204 M 204
M
Sbjct: 122 M 122
>gi|302758342|ref|XP_002962594.1| hypothetical protein SELMODRAFT_7071 [Selaginella moellendorffii]
gi|300169455|gb|EFJ36057.1| hypothetical protein SELMODRAFT_7071 [Selaginella moellendorffii]
Length = 63
Score = 72.4 bits (176), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 34/63 (53%), Positives = 42/63 (66%), Gaps = 7/63 (11%)
Query: 135 GCSDDEFPWDKNTHDE-------LDMCHAEMNAILNKNSADTKRCKLYTSLFPCNECAKV 187
GCSDD+ PW K + D +CHAE+NAILN+N T +LY ++FPCNECAKV
Sbjct: 1 GCSDDKLPWAKKSRDSDLLKTKYPYICHAEVNAILNRNHTSTSGQRLYVTMFPCNECAKV 60
Query: 188 IIQ 190
IIQ
Sbjct: 61 IIQ 63
Score = 48.9 bits (115), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 21/33 (63%), Positives = 26/33 (78%)
Query: 1 MNAILNKNSADTKRCKLYTSLFPCNECAKVIIQ 33
+NAILN+N T +LY ++FPCNECAKVIIQ
Sbjct: 31 VNAILNRNHTSTSGQRLYVTMFPCNECAKVIIQ 63
>gi|392989712|ref|YP_006488305.1| comE operon protein 2 [Enterococcus hirae ATCC 9790]
gi|392337132|gb|AFM71414.1| comE operon protein 2 [Enterococcus hirae ATCC 9790]
Length = 160
Score = 72.4 bits (176), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 45/122 (36%), Positives = 68/122 (55%), Gaps = 10/122 (8%)
Query: 86 DDVLEWHEYFMASAFLVAKRSKDPVTRVGAVIVNEDNKIVGTGYNGMPIG---CSDDE-F 141
++ + W +YFMA A L++ RS VGA +V E +I+ GYNG G C D+ +
Sbjct: 3 NERIPWDQYFMAQAVLLSLRSTCTRLEVGATLVRE-KRIIAGGYNGAVSGDVHCIDEGCY 61
Query: 142 PWDKNTHDELDMCHAEMNAILN--KNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIYM 199
D + L HAEMNA+L K T+ ++Y + FPC C K ++Q+GIK++ Y+
Sbjct: 62 IVDGHC---LRTIHAEMNALLQCAKLGIPTEGAEIYVTHFPCLACTKALLQAGIKKINYL 118
Query: 200 CD 201
D
Sbjct: 119 HD 120
Score = 38.9 bits (89), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 18/46 (39%), Positives = 29/46 (63%), Gaps = 2/46 (4%)
Query: 1 MNAILN--KNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIYMCD 44
MNA+L K T+ ++Y + FPC C K ++Q+GIK++ Y+ D
Sbjct: 75 MNALLQCAKLGIPTEGAEIYVTHFPCLACTKALLQAGIKKINYLHD 120
>gi|282883351|ref|ZP_06291944.1| ComE operon protein 2 [Peptoniphilus lacrimalis 315-B]
gi|300813982|ref|ZP_07094275.1| putative ComE operon protein 2 [Peptoniphilus sp. oral taxon 836
str. F0141]
gi|281296762|gb|EFA89265.1| ComE operon protein 2 [Peptoniphilus lacrimalis 315-B]
gi|300511876|gb|EFK39083.1| putative ComE operon protein 2 [Peptoniphilus sp. oral taxon 836
str. F0141]
Length = 139
Score = 72.4 bits (176), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 47/113 (41%), Positives = 59/113 (52%), Gaps = 7/113 (6%)
Query: 91 WHEYFMASAFLVAKRSKDPVTRVGAVIVNEDNKIVGTGYNGMPIG---CSDDEFPWDKNT 147
W EYFM LVA+RS VG V+VN D++IV TGYNG G C D ++
Sbjct: 5 WDEYFMEITQLVAQRSTCDRAFVGCVLVNSDHRIVSTGYNGTASGNPHCIDVGHRM-RDG 63
Query: 148 HDELDMCHAEMNAIL--NKNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIY 198
H + HAEMNA+L K K Y + FPC C K +IQ+GI + Y
Sbjct: 64 HC-IATIHAEMNALLYCAKEGIPAKGSICYVTHFPCLNCTKALIQAGISAIYY 115
>gi|9632136|ref|NP_048952.1| hypothetical protein [Paramecium bursaria Chlorella virus 1]
gi|2447078|gb|AAC96936.1| hypothetical protein [Paramecium bursaria Chlorella virus 1]
Length = 142
Score = 72.4 bits (176), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 37/93 (39%), Positives = 56/93 (60%), Gaps = 1/93 (1%)
Query: 106 SKDPVTRVGAVIVNEDNKIVGTGYNGMPIGCSDDEFPWDKNT-HDELDMCHAEMNAILNK 164
SKDP T+V A++++ +N I GYNG+P G + W+K ++ + A A +
Sbjct: 19 SKDPNTKVAALVIDNNNNIASVGYNGLPRGFEETSDRWEKPMKYNYVVHAEANAIATAAR 78
Query: 165 NSADTKRCKLYTSLFPCNECAKVIIQSGIKEVI 197
N C + T+LFPC EC+K+IIQSGI++VI
Sbjct: 79 NGVRLDGCSIITTLFPCKECSKLIIQSGIRKVI 111
Score = 44.7 bits (104), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 23/61 (37%), Positives = 32/61 (52%), Gaps = 2/61 (3%)
Query: 7 KNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIYM--CDKHKQKPATIASKRMFDAAKV 64
+N C + T+LFPC EC+K+IIQSGI++VI C + S MFD +
Sbjct: 78 RNGVRLDGCSIITTLFPCKECSKLIIQSGIRKVITSKPCKDSSWLESFSFSNEMFDECGI 137
Query: 65 H 65
Sbjct: 138 E 138
>gi|374294765|ref|YP_005044956.1| deoxycytidylate deaminase [Clostridium clariflavum DSM 19732]
gi|359824259|gb|AEV67032.1| deoxycytidylate deaminase [Clostridium clariflavum DSM 19732]
Length = 148
Score = 72.4 bits (176), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 46/122 (37%), Positives = 65/122 (53%), Gaps = 12/122 (9%)
Query: 91 WHEYFMASAFLVAKRSKDPVTRVGAVIVNEDNKIVGTGYNGMPIGCSD-DEFPWDK---- 145
W +YFM L+ KRS +VGA+IV +D +I+ TGYNG P+GC DE +
Sbjct: 5 WDQYFMEIVELIKKRSTCKRRQVGALIV-KDKRILATGYNGAPMGCKHCDEVGCLREKLN 63
Query: 146 ----NTHDELDMCHAEMNAILNKNSADT--KRCKLYTSLFPCNECAKVIIQSGIKEVIYM 199
H+ HAE NAI+ + T K LY + PC CAK+ I +GIK++++
Sbjct: 64 IPSGERHELCRAIHAEQNAIVQAAYSGTSVKDGTLYVTTQPCVLCAKMAINAGIKKIVFK 123
Query: 200 CD 201
D
Sbjct: 124 GD 125
>gi|433448292|ref|ZP_20411265.1| ComE operon protein 2 [Weissella ceti NC36]
gi|429539923|gb|ELA07956.1| ComE operon protein 2 [Weissella ceti NC36]
Length = 162
Score = 72.4 bits (176), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 40/115 (34%), Positives = 66/115 (57%), Gaps = 6/115 (5%)
Query: 89 LEWHEYFMASAFLVAKRSKDPVTRVGAVIVNEDNKIVGTGYNGMPIGCS--DDEFPWDKN 146
++W YFM A + A R P RVGAVIV +D +++G+G+NG +G D+ ++
Sbjct: 5 IDWPTYFMLQAVMTASRGTCPRLRVGAVIV-KDGRVIGSGFNGSVVGTPHCDEVGDLMRD 63
Query: 147 THDELDMCHAEMNAI--LNKNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIYM 199
H + HAE NA+ L K + ++Y + FPC C K+++Q+GI ++ Y+
Sbjct: 64 GHC-IRAVHAEQNALMQLAKMGIAAEGSEIYVTDFPCVYCTKLLLQAGITKINYL 117
>gi|409100748|ref|ZP_11220772.1| zinc-binding CMP/dCMP deaminase [Pedobacter agri PB92]
Length = 140
Score = 72.4 bits (176), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 45/105 (42%), Positives = 59/105 (56%), Gaps = 9/105 (8%)
Query: 102 VAKRSKDPVTRVGAVIVNEDNKIVGTGYNGMPIGCS--DDEFPWDKNTHDELDMC----H 155
+A RS VGAV+ +D +I+ GYNG P G D+E+P D C H
Sbjct: 7 LAARSHCVRAHVGAVL-TKDTRIISIGYNGPPAGTHNCDEEWPEHGCARDSKGSCSLALH 65
Query: 156 AEMNAIL--NKNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIY 198
AE NAIL +KN + + C LYT+L PC CA++I+ SGIK V Y
Sbjct: 66 AEENAILYASKNGSKIEGCTLYTTLSPCIACARLILSSGIKLVYY 110
Score = 44.7 bits (104), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 22/42 (52%), Positives = 29/42 (69%), Gaps = 2/42 (4%)
Query: 2 NAIL--NKNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIY 41
NAIL +KN + + C LYT+L PC CA++I+ SGIK V Y
Sbjct: 69 NAILYASKNGSKIEGCTLYTTLSPCIACARLILSSGIKLVYY 110
>gi|335357115|ref|ZP_08548985.1| ComE operon protein 2 [Lactobacillus animalis KCTC 3501]
Length = 162
Score = 72.4 bits (176), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 44/117 (37%), Positives = 66/117 (56%), Gaps = 10/117 (8%)
Query: 89 LEWHEYFMASAFLVAKRSKDPVTRVGAVIVNEDNKIVGTGYNGMPIG---CSDDE-FPWD 144
+ W +YFM A L++ RS VGA++V D +++ GYNG G C DD + D
Sbjct: 5 IPWDQYFMLQAVLLSLRSTCTRLSVGAILV-RDQRMIAGGYNGSVSGDKHCIDDGCYMVD 63
Query: 145 KNTHDELDMCHAEMNAILN--KNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIYM 199
+ L HAEMNA+L K T +LY + FPC +C K+++Q+GIK++ Y+
Sbjct: 64 GHC---LRTIHAEMNAVLQCAKFGIPTDGAELYVTDFPCLQCTKMLLQAGIKKIHYL 117
Score = 39.7 bits (91), Expect = 0.82, Method: Compositional matrix adjust.
Identities = 18/44 (40%), Positives = 29/44 (65%), Gaps = 2/44 (4%)
Query: 1 MNAILN--KNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIYM 42
MNA+L K T +LY + FPC +C K+++Q+GIK++ Y+
Sbjct: 74 MNAVLQCAKFGIPTDGAELYVTDFPCLQCTKMLLQAGIKKIHYL 117
>gi|169832085|ref|YP_001718067.1| CMP/dCMP deaminase [Candidatus Desulforudis audaxviator MP104C]
gi|169638929|gb|ACA60435.1| CMP/dCMP deaminase, zinc-binding [Candidatus Desulforudis
audaxviator MP104C]
Length = 149
Score = 72.4 bits (176), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 44/128 (34%), Positives = 63/128 (49%), Gaps = 17/128 (13%)
Query: 91 WHEYFMASAFLVAKRSKDPVTRVGAVIVNEDNKIVGTGYNGMPIG---------CSDDEF 141
W E FM A L+A+RS VGAV+V DN+ + +GYNG P G C ++
Sbjct: 5 WDEIFMEQAHLMARRSTCLRRHVGAVLV-RDNRAIASGYNGPPSGLPHCDERGGCLREQL 63
Query: 142 PWDKNTHDEL-DMCHAEMNAILNK--NSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIY 198
E+ HAE N IL + + LY + FPC CAK+++Q G++ +IY
Sbjct: 64 GVPSGHRQEICRALHAEQNVILQLAITGLNGRDATLYVTHFPCFTCAKLLVQLGVRRIIY 123
Query: 199 MCDKQMSY 206
Q+ Y
Sbjct: 124 ----QLGY 127
>gi|417012194|ref|ZP_11946439.1| hypothetical protein AAULH_01270 [Lactobacillus helveticus MTCC
5463]
gi|328463918|gb|EGF35436.1| hypothetical protein AAULH_01270 [Lactobacillus helveticus MTCC
5463]
Length = 358
Score = 72.4 bits (176), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 42/116 (36%), Positives = 65/116 (56%), Gaps = 12/116 (10%)
Query: 87 DVLEWHEYFMASAFLVAKRSKDPVTRVGAVIVNEDNKIVGTGYNGMPIGCSDDEFPWDKN 146
D + W +YFM A ++A+RS VG+V+V +DN+I+GTGYNG G + D+
Sbjct: 3 DRIPWKQYFMMQALVIAQRSTCNRALVGSVLV-KDNRIIGTGYNGSVSG----QPHCDEV 57
Query: 147 THDELD-----MCHAEMNAILN--KNSADTKRCKLYTSLFPCNECAKVIIQSGIKE 195
H +D H+EMNAI+ K T ++Y + FPC C K + Q+G+++
Sbjct: 58 GHQMVDGHCVRTIHSEMNAIIQCAKFGVSTDDTEIYVTHFPCYNCCKSLFQAGVRK 113
>gi|90961656|ref|YP_535572.1| ComE operon protein 2 [Lactobacillus salivarius UCC118]
gi|385840340|ref|YP_005863664.1| ComE operon protein 2 [Lactobacillus salivarius CECT 5713]
gi|417788250|ref|ZP_12435933.1| DCMP deaminase / late competence protein ComEB [Lactobacillus
salivarius NIAS840]
gi|418961286|ref|ZP_13513173.1| ComE operon protein 2 [Lactobacillus salivarius SMXD51]
gi|90820850|gb|ABD99489.1| ComE operon protein 2 [Lactobacillus salivarius UCC118]
gi|300214461|gb|ADJ78877.1| ComE operon protein 2 [Lactobacillus salivarius CECT 5713]
gi|334308427|gb|EGL99413.1| DCMP deaminase / late competence protein ComEB [Lactobacillus
salivarius NIAS840]
gi|380344953|gb|EIA33299.1| ComE operon protein 2 [Lactobacillus salivarius SMXD51]
Length = 158
Score = 72.0 bits (175), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 43/120 (35%), Positives = 66/120 (55%), Gaps = 10/120 (8%)
Query: 86 DDVLEWHEYFMASAFLVAKRSKDPVTRVGAVIVNEDNKIVGTGYNGMPIGCSDDEFPWDK 145
D + W++YFM A L++ RS VGA++V D +++ GYNG S D+ D
Sbjct: 3 DKRIPWNQYFMLQAVLLSLRSTCERLSVGAILV-RDKRVIAGGYNG---AVSGDDHCIDV 58
Query: 146 NTHDE----LDMCHAEMNAIL--NKNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIYM 199
+ L HAEMNA+L +K T ++Y + FPC +C K ++Q+GIK++ YM
Sbjct: 59 GCYVVDGHCLRTIHAEMNAVLQCSKFGIPTDGAEIYVTDFPCLQCTKSLLQAGIKKIYYM 118
Score = 41.6 bits (96), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 22/59 (37%), Positives = 34/59 (57%), Gaps = 2/59 (3%)
Query: 1 MNAIL--NKNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIYMCDKHKQKPATIASKR 57
MNA+L +K T ++Y + FPC +C K ++Q+GIK++ YM + H A KR
Sbjct: 75 MNAVLQCSKFGIPTDGAEIYVTDFPCLQCTKSLLQAGIKKIYYMRNYHNDDYAIRLLKR 133
>gi|213961866|ref|ZP_03390132.1| cytidine/deoxycytidylate deaminase family protein [Capnocytophaga
sputigena Capno]
gi|213955655|gb|EEB66971.1| cytidine/deoxycytidylate deaminase family protein [Capnocytophaga
sputigena Capno]
Length = 146
Score = 72.0 bits (175), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 46/115 (40%), Positives = 66/115 (57%), Gaps = 11/115 (9%)
Query: 89 LEWHEYFMASAFLVAKRSKDPVTRVGAVIVNEDNKIVGTGYNGMPIG---CSDDEFPWDK 145
L + + +M A AK S +VGA++V +D I+ GYNG P G C +DE +
Sbjct: 10 LRYDKAYMRMAMEWAKLSYSQRKQVGAIMV-KDRMIISDGYNGTPTGFDNCCEDE---EG 65
Query: 146 NTHDELDMCHAEMNAILNKNSA--DTKRCKLYTSLFPCNECAKVIIQSGIKEVIY 198
NTH + HAE NAI+ S+ ++ LY ++ PC EC+K+I QSGIK V+Y
Sbjct: 66 NTH--WYVLHAEANAIMKVASSTQSSEGATLYITMSPCKECSKLIYQSGIKRVVY 118
Score = 40.8 bits (94), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 19/42 (45%), Positives = 28/42 (66%), Gaps = 2/42 (4%)
Query: 2 NAILNKNSA--DTKRCKLYTSLFPCNECAKVIIQSGIKEVIY 41
NAI+ S+ ++ LY ++ PC EC+K+I QSGIK V+Y
Sbjct: 77 NAIMKVASSTQSSEGATLYITMSPCKECSKLIYQSGIKRVVY 118
>gi|229086897|ref|ZP_04219056.1| ComE operon protein 2 [Bacillus cereus Rock3-44]
gi|228696407|gb|EEL49233.1| ComE operon protein 2 [Bacillus cereus Rock3-44]
Length = 185
Score = 72.0 bits (175), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 47/119 (39%), Positives = 63/119 (52%), Gaps = 10/119 (8%)
Query: 89 LEWHEYFMASAFLVAKRSKDPVTRVGAVIVNEDNKIVGTGYNGMPIG---CSDDE-FPWD 144
+ W +YFM + L++ RS VGA IV D +I+ GYNG G C DD + D
Sbjct: 4 ISWDQYFMTQSHLLSLRSTCTRLAVGATIVR-DKRIIAGGYNGSIKGGVHCIDDGCYVID 62
Query: 145 KNTHDELDMCHAEMNAILN--KNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIYMCD 201
+ + HAEMNA+L K T+ ++Y + FPC +C K IIQSGI V Y D
Sbjct: 63 NHC---VRTIHAEMNALLQCAKFGVKTEDAEIYVTHFPCLQCCKAIIQSGITAVYYARD 118
Score = 42.4 bits (98), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 26/66 (39%), Positives = 36/66 (54%), Gaps = 6/66 (9%)
Query: 1 MNAILN--KNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIYMCDKHKQKPATIASKRM 58
MNA+L K T+ ++Y + FPC +C K IIQSGI V Y D +K P + +
Sbjct: 73 MNALLQCAKFGVKTEDAEIYVTHFPCLQCCKAIIQSGITAVYYARD-YKNHPYAV---EL 128
Query: 59 FDAAKV 64
F+ A V
Sbjct: 129 FEQANV 134
>gi|385263276|ref|ZP_10041368.1| putative ComE operon protein 2 [Streptococcus sp. SK643]
gi|385188590|gb|EIF36075.1| putative ComE operon protein 2 [Streptococcus sp. SK643]
Length = 155
Score = 72.0 bits (175), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 48/124 (38%), Positives = 64/124 (51%), Gaps = 15/124 (12%)
Query: 89 LEWHEYFMASAFLVAKRSKDPVTRVGAVIVNEDNKIVGTGYNGMPIGCSDDEFPWDKNTH 148
L W EYF A A L+A RS +VGA++V +DNK++ TGYNG S E D H
Sbjct: 6 LAWDEYFAAQALLIANRSTCKRAKVGAILV-KDNKVISTGYNG---SVSGTEHCID---H 58
Query: 149 DELDM-------CHAEMNAILNKNSADTKR-CKLYTSLFPCNECAKVIIQSGIKEVIYMC 200
D L + HAE+NAIL R Y + FPC C K ++Q G + V+Y+
Sbjct: 59 DCLVIEGHCVRTLHAEVNAILQGAGRGVPRGFTAYVTHFPCLNCTKQLLQVGCERVVYIN 118
Query: 201 DKQM 204
+M
Sbjct: 119 QYRM 122
>gi|313768407|ref|YP_004062087.1| hypothetical protein MpV1_204 [Micromonas sp. RCC1109 virus MpV1]
gi|312599103|gb|ADQ91127.1| hypothetical protein MpV1_204 [Micromonas sp. RCC1109 virus MpV1]
Length = 145
Score = 72.0 bits (175), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 43/114 (37%), Positives = 60/114 (52%), Gaps = 6/114 (5%)
Query: 87 DVLEWHEYFMASAFLVAKRSKDPVTRVGAVIVNEDNKIVGTGYNGMPIGCSDDEFPWDKN 146
D + W EYFM +A L + RS +VG V+V ++N+++ GYNG GC D +
Sbjct: 3 DRISWDEYFMQTAQLASVRSPCERLKVGCVLV-KNNRLISMGYNGFLGGCEHKSIVRDGH 61
Query: 147 THDELDMCHAEMNAILN--KNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIY 198
E HAE+NAI + K A C Y + +PC C K + SGIK+V Y
Sbjct: 62 ---EQATIHAEINAITDAAKRGASIDDCVAYVTHYPCLNCYKALASSGIKKVYY 112
>gi|452994045|emb|CCQ94386.1| putative dCMP deaminase [Clostridium ultunense Esp]
Length = 178
Score = 72.0 bits (175), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 45/116 (38%), Positives = 60/116 (51%), Gaps = 10/116 (8%)
Query: 89 LEWHEYFMASAFLVAKRSKDPVTRVGAVIVNEDNKIVGTGYNGMPIGCSDDEFPWDKNTH 148
+ WHEYFMA A L++ R+ VGAVI D +++ GYNG G DE D
Sbjct: 12 ISWHEYFMAQAKLISLRATCTRLMVGAVI-TRDRRVIAGGYNGSIAG---DEHCIDVGCK 67
Query: 149 DELDMC----HAEMNAILN--KNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIY 198
C HAE NA++ K T +LY + FPC C K++IQ+GIK + Y
Sbjct: 68 VVDGHCIRTIHAEQNALMQCAKFGVPTDGAELYVTHFPCLHCTKLMIQAGIKHIYY 123
Score = 37.4 bits (85), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 18/47 (38%), Positives = 26/47 (55%), Gaps = 2/47 (4%)
Query: 2 NAILN--KNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIYMCDKH 46
NA++ K T +LY + FPC C K++IQ+GIK + Y H
Sbjct: 82 NALMQCAKFGVPTDGAELYVTHFPCLHCTKLMIQAGIKHIYYETPYH 128
>gi|401409255|ref|XP_003884076.1| hypothetical protein NCLIV_038260 [Neospora caninum Liverpool]
gi|325118493|emb|CBZ54045.1| hypothetical protein NCLIV_038260 [Neospora caninum Liverpool]
Length = 487
Score = 72.0 bits (175), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 44/119 (36%), Positives = 59/119 (49%), Gaps = 13/119 (10%)
Query: 91 WHEYFMASAFLVAKRSKDPVTRVGAVIVNEDNKIVGTGYNGMPI--------GCSDDEFP 142
W YFM FL + RS RVGA IV N+++ TGYNG P GC+ P
Sbjct: 330 WDTYFMRLTFLASTRSNCMKRRVGA-IVARGNRVIATGYNGTPSQAANCNAGGCARCNDP 388
Query: 143 WDKNTHDELDMC---HAEMNAILNKNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIY 198
+ + L+ C HAE NA+L LY + PC CAK+++QS I+ V+Y
Sbjct: 389 -NVSQGRALEACECIHAEANALLEAGRDRAMNGTLYVTCLPCLGCAKLVVQSAIQTVVY 446
>gi|335029452|ref|ZP_08522959.1| putative ComE operon protein 2 [Streptococcus infantis SK1076]
gi|334268749|gb|EGL87181.1| putative ComE operon protein 2 [Streptococcus infantis SK1076]
Length = 155
Score = 72.0 bits (175), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 50/124 (40%), Positives = 64/124 (51%), Gaps = 15/124 (12%)
Query: 89 LEWHEYFMASAFLVAKRSKDPVTRVGAVIVNEDNKIVGTGYNGMPIGCSDDEFPWDKNTH 148
L W EYF A A L+A RS +VGAV+V +DNK+V TGYNG S E D H
Sbjct: 6 LAWDEYFAAQALLIANRSTCKRAKVGAVLV-KDNKVVSTGYNG---SVSGTEHCID---H 58
Query: 149 DELDM-------CHAEMNAILNKNSADT-KRCKLYTSLFPCNECAKVIIQSGIKEVIYMC 200
D L + HAE+NAIL K Y + FPC C K ++Q G + V+Y+
Sbjct: 59 DCLVIEGHCVRTLHAEVNAILQGAERGVPKGFTAYVTHFPCLNCTKQLLQVGCERVVYIN 118
Query: 201 DKQM 204
+M
Sbjct: 119 QYRM 122
>gi|425737424|ref|ZP_18855697.1| competence protein ComE [Staphylococcus massiliensis S46]
gi|425482772|gb|EKU49928.1| competence protein ComE [Staphylococcus massiliensis S46]
Length = 153
Score = 72.0 bits (175), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 44/115 (38%), Positives = 60/115 (52%), Gaps = 8/115 (6%)
Query: 89 LEWHEYFMASAFLVAKRSKDPVTRVGAVIVNEDNKIVGTGYNGMPIG---CSDDEFPWDK 145
+ W +YFMA ++L++ RS VGA IV +DN+I+ GYNG G C D+ +
Sbjct: 4 INWTDYFMAQSYLLSLRSTCIRLSVGATIV-KDNRIIAGGYNGSVAGEVHCIDEGCLIED 62
Query: 146 NTHDELDMCHAEMNAILN--KNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIY 198
+ HAEMNA+L K +Y + FPC C K IIQ+GI V Y
Sbjct: 63 G--HCIRTIHAEMNALLQCAKQGVSAHNATIYVTHFPCLNCTKSIIQAGITTVYY 115
Score = 37.7 bits (86), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 20/53 (37%), Positives = 25/53 (47%), Gaps = 2/53 (3%)
Query: 1 MNAILN--KNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIYMCDKHKQKPA 51
MNA+L K +Y + FPC C K IIQ+GI V Y + H A
Sbjct: 73 MNALLQCAKQGVSAHNATIYVTHFPCLNCTKSIIQAGITTVYYAENYHNHDYA 125
>gi|332880028|ref|ZP_08447712.1| cytidine and deoxycytidylate deaminase zinc-binding region
[Capnocytophaga sp. oral taxon 329 str. F0087]
gi|332682024|gb|EGJ54937.1| cytidine and deoxycytidylate deaminase zinc-binding region
[Capnocytophaga sp. oral taxon 329 str. F0087]
Length = 146
Score = 72.0 bits (175), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 45/115 (39%), Positives = 66/115 (57%), Gaps = 11/115 (9%)
Query: 89 LEWHEYFMASAFLVAKRSKDPVTRVGAVIVNEDNKIVGTGYNGMPIG---CSDDEFPWDK 145
L + + +M A AK S +VGA++V +D I+ GYNG P G C +DE +
Sbjct: 10 LRYDKAYMRMAMEWAKLSYSQRKQVGAIMV-KDRMIISDGYNGTPTGFDNCCEDE---EG 65
Query: 146 NTHDELDMCHAEMNAILN--KNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIY 198
NTH + HAE NAI+ ++ ++ LY ++ PC EC+K+I QSGIK V+Y
Sbjct: 66 NTH--WFVLHAEANAIMKVAASTQSSQGATLYITMSPCKECSKLIYQSGIKRVVY 118
Score = 40.8 bits (94), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 18/42 (42%), Positives = 28/42 (66%), Gaps = 2/42 (4%)
Query: 2 NAILN--KNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIY 41
NAI+ ++ ++ LY ++ PC EC+K+I QSGIK V+Y
Sbjct: 77 NAIMKVAASTQSSQGATLYITMSPCKECSKLIYQSGIKRVVY 118
>gi|357051132|ref|ZP_09112328.1| ComE operon protein 2 [Enterococcus saccharolyticus 30_1]
gi|355380757|gb|EHG27893.1| ComE operon protein 2 [Enterococcus saccharolyticus 30_1]
Length = 184
Score = 72.0 bits (175), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 44/119 (36%), Positives = 66/119 (55%), Gaps = 10/119 (8%)
Query: 89 LEWHEYFMASAFLVAKRSKDPVTRVGAVIVNEDNKIVGTGYNGMPIG---CSDDE-FPWD 144
+ W +YFMA A L++ RS VGA +V +D +I+ GYNG G C D+ + D
Sbjct: 25 IPWDQYFMAQAVLLSLRSTCSRLEVGATLV-KDRRIIAGGYNGSVSGDVHCIDEGCYVVD 83
Query: 145 KNTHDELDMCHAEMNAILN--KNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIYMCD 201
+ + HAEMNA+L K T ++Y + FPC C K I+Q+G+K++ Y+ D
Sbjct: 84 GHC---IRTIHAEMNALLQCAKLGVSTDNAEIYVTHFPCLPCTKAILQAGVKKIHYLND 139
Score = 39.7 bits (91), Expect = 0.75, Method: Compositional matrix adjust.
Identities = 29/90 (32%), Positives = 47/90 (52%), Gaps = 11/90 (12%)
Query: 1 MNAILN--KNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIYMCDKHKQKPATIASKRM 58
MNA+L K T ++Y + FPC C K I+Q+G+K++ Y+ D + A +++
Sbjct: 94 MNALLQCAKLGVSTDNAEIYVTHFPCLPCTKAILQAGVKKIHYLNDYRNNQYALDLIQQV 153
Query: 59 FDAAKVHYWSEMD-----KMN-GVQNGSPH 82
A VH E+D K++ G NG+ H
Sbjct: 154 --GATVH-QVELDPAYFEKLSFGALNGATH 180
>gi|317051269|ref|YP_004112385.1| CMP/dCMP deaminase zinc-binding protein [Desulfurispirillum indicum
S5]
gi|316946353|gb|ADU65829.1| CMP/dCMP deaminase zinc-binding protein [Desulfurispirillum indicum
S5]
Length = 154
Score = 72.0 bits (175), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 46/121 (38%), Positives = 62/121 (51%), Gaps = 13/121 (10%)
Query: 91 WHEYFMASAFLVAKRSKDPVTRVGAVIVNEDNKIVGTGYNGMPIG---------CSDDEF 141
W +YFM V +RS ++GA+IV E +I+ TGYNG P G C DE
Sbjct: 9 WDQYFMNITAEVGRRSSCLRRQIGAIIVRE-KRIIATGYNGAPPGVRSSMEIGSCLRDER 67
Query: 142 PWDKNTHDEL-DMCHAEMNAILN--KNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIY 198
T E+ HAE NAIL + + LY + PC+ CAK+II +GI+EV Y
Sbjct: 68 NIPSGTQHEICRGLHAEQNAILQAARFGTSVEGATLYCTHQPCSICAKIIIGAGIREVKY 127
Query: 199 M 199
+
Sbjct: 128 V 128
>gi|227890744|ref|ZP_04008549.1| competence protein ComEB [Lactobacillus salivarius ATCC 11741]
gi|301300424|ref|ZP_07206625.1| ComE operon protein 2 [Lactobacillus salivarius ACS-116-V-Col5a]
gi|227867682|gb|EEJ75103.1| competence protein ComEB [Lactobacillus salivarius ATCC 11741]
gi|300851967|gb|EFK79650.1| ComE operon protein 2 [Lactobacillus salivarius ACS-116-V-Col5a]
Length = 162
Score = 72.0 bits (175), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 43/120 (35%), Positives = 66/120 (55%), Gaps = 10/120 (8%)
Query: 86 DDVLEWHEYFMASAFLVAKRSKDPVTRVGAVIVNEDNKIVGTGYNGMPIGCSDDEFPWDK 145
D + W++YFM A L++ RS VGA++V D +++ GYNG S D+ D
Sbjct: 7 DKRIPWNQYFMLQAVLLSLRSTCERLSVGAILV-RDKRVIAGGYNG---AVSGDDHCIDV 62
Query: 146 NTHDE----LDMCHAEMNAIL--NKNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIYM 199
+ L HAEMNA+L +K T ++Y + FPC +C K ++Q+GIK++ YM
Sbjct: 63 GCYVVDGHCLRTIHAEMNAVLQCSKFGIPTDGAEIYVTDFPCLQCTKSLLQAGIKKIYYM 122
Score = 41.6 bits (96), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 22/59 (37%), Positives = 34/59 (57%), Gaps = 2/59 (3%)
Query: 1 MNAIL--NKNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIYMCDKHKQKPATIASKR 57
MNA+L +K T ++Y + FPC +C K ++Q+GIK++ YM + H A KR
Sbjct: 79 MNAVLQCSKFGIPTDGAEIYVTDFPCLQCTKSLLQAGIKKIYYMRNYHNDDYAIRLLKR 137
>gi|171914203|ref|ZP_02929673.1| deoxycytidylate deaminase [Verrucomicrobium spinosum DSM 4136]
Length = 162
Score = 72.0 bits (175), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 43/135 (31%), Positives = 72/135 (53%), Gaps = 11/135 (8%)
Query: 70 MDKMNGVQNGSPHKRVDDVLEWHEYFMASAFLVAKRSKDPVTRVGAVIVNEDNKIVGTGY 129
M + + N +P + + EY MA A + + RS+DP +VGAV + DN+++GT Y
Sbjct: 1 MSDASSIPNVTPPR---TRISIPEYAMALAHVASLRSEDPYRKVGAVAFDFDNRVIGTAY 57
Query: 130 NGMPIGC-SDDEFPWDKNTHDELDMCHAEMN--AILNKNSADTKRCKLYTSLFPCNECAK 186
NG+ G +D EF D++ + M HAE+N ++ + + C + PC CA+
Sbjct: 58 NGLAPGFNADHEFWLDRDIRRKF-MLHAEVNLCSLFTRGTVKLVAC----TTKPCTSCAQ 112
Query: 187 VIIQSGIKEVIYMCD 201
++ G+KE+ Y D
Sbjct: 113 MLAAYGVKEIYYRDD 127
>gi|346326029|gb|EGX95625.1| deoxycytidylate deaminase, putative [Cordyceps militaris CM01]
Length = 362
Score = 72.0 bits (175), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 47/118 (39%), Positives = 59/118 (50%), Gaps = 10/118 (8%)
Query: 91 WHEYFMASAFLVAKRSKDPVTRVGAVIVNEDNKIVGTGYNGMPIG---CSDDEFPWDKNT 147
W YFM+ A L A+RS RVG V+V E +++V TGYNG P G C+D P +
Sbjct: 205 WDTYFMSLAALAAQRSNCMKRRVGCVLVGEGHRVVSTGYNGTPRGLRNCADGGCPRCNSG 264
Query: 148 HDE---LDMC---HAEMNAILNKNSADTKRCK-LYTSLFPCNECAKVIIQSGIKEVIY 198
H L C HAE NA+L + LY PC C+ I Q GI EV+Y
Sbjct: 265 HSSGVGLATCLCLHAEENALLEAGRDRIRGGSVLYCDTCPCLTCSIKICQVGISEVVY 322
>gi|257869951|ref|ZP_05649604.1| cytidine/deoxycytidylate deaminase [Enterococcus gallinarum EG2]
gi|257804115|gb|EEV32937.1| cytidine/deoxycytidylate deaminase [Enterococcus gallinarum EG2]
Length = 180
Score = 72.0 bits (175), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 44/119 (36%), Positives = 66/119 (55%), Gaps = 10/119 (8%)
Query: 89 LEWHEYFMASAFLVAKRSKDPVTRVGAVIVNEDNKIVGTGYNGMPIG---CSDDE-FPWD 144
+ W +YFMA A L++ RS VGA +V +D +I+ GYNG G C D+ + D
Sbjct: 21 IPWDQYFMAQAVLLSLRSTCSRLEVGATLV-KDRRIIAGGYNGSVSGDVHCIDEGCYVVD 79
Query: 145 KNTHDELDMCHAEMNAILN--KNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIYMCD 201
+ + HAEMNA+L K T ++Y + FPC C K I+Q+G+K++ Y+ D
Sbjct: 80 GHC---IRTIHAEMNALLQCAKLGVSTDNAEIYVTHFPCLPCTKAILQAGVKKIHYLND 135
Score = 39.7 bits (91), Expect = 0.82, Method: Compositional matrix adjust.
Identities = 29/90 (32%), Positives = 47/90 (52%), Gaps = 11/90 (12%)
Query: 1 MNAILN--KNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIYMCDKHKQKPATIASKRM 58
MNA+L K T ++Y + FPC C K I+Q+G+K++ Y+ D + A +++
Sbjct: 90 MNALLQCAKLGVSTDNAEIYVTHFPCLPCTKAILQAGVKKIHYLNDYRNNQYALDLIQQV 149
Query: 59 FDAAKVHYWSEMD-----KMN-GVQNGSPH 82
A VH E+D K++ G NG+ H
Sbjct: 150 --GATVHQ-VELDPAYFEKLSFGALNGATH 176
>gi|392957236|ref|ZP_10322760.1| ComE operon protein 2 [Bacillus macauensis ZFHKF-1]
gi|391876643|gb|EIT85239.1| ComE operon protein 2 [Bacillus macauensis ZFHKF-1]
Length = 191
Score = 72.0 bits (175), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 47/117 (40%), Positives = 61/117 (52%), Gaps = 6/117 (5%)
Query: 89 LEWHEYFMASAFLVAKRSKDPVTRVGAVIVNEDNKIVGTGYNGMPIGCSD--DEFPWDKN 146
+ W YFMA + L+A RS VGA IV D +I+ GYNG G DE + +
Sbjct: 4 ISWDHYFMAQSHLLAMRSTCTRLEVGATIVR-DKRIIAGGYNGSISGGVHCIDEGCYVID 62
Query: 147 THDELDMCHAEMNAILN--KNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIYMCD 201
H + HAEMNAIL K + ++Y + FPC C + IIQSGIK + Y D
Sbjct: 63 GHC-VRTIHAEMNAILQCAKFGVPVEGAEMYVTHFPCLHCCRTIIQSGIKTLYYAND 118
Score = 41.6 bits (96), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 23/59 (38%), Positives = 31/59 (52%), Gaps = 3/59 (5%)
Query: 1 MNAILN--KNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIYMCDKHKQKPATIASKR 57
MNAIL K + ++Y + FPC C + IIQSGIK +Y + +K P I R
Sbjct: 73 MNAILQCAKFGVPVEGAEMYVTHFPCLHCCRTIIQSGIK-TLYYANDYKNHPYAIEQFR 130
>gi|427439836|ref|ZP_18924400.1| ComE operon protein 2 [Pediococcus lolii NGRI 0510Q]
gi|425787968|dbj|GAC45188.1| ComE operon protein 2 [Pediococcus lolii NGRI 0510Q]
Length = 163
Score = 72.0 bits (175), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 42/122 (34%), Positives = 68/122 (55%), Gaps = 10/122 (8%)
Query: 84 RVDDVLEWHEYFMASAFLVAKRSKDPVTRVGAVIVNEDNKIVGTGYNGMPIGCSDDEFPW 143
++D ++W +YFM A L++ RS VGA+IV D +++ GYNG S D
Sbjct: 3 KMDKRIDWDQYFMTQALLLSLRSTCKRLSVGAIIV-RDRRVIAGGYNG---SVSGDVHCL 58
Query: 144 DKNTHDELDMC----HAEMNAIL--NKNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVI 197
D+ + C HAEMNA+L +K T ++Y + FPC +C K+++Q+GI ++
Sbjct: 59 DEGCYLVDGHCVRTIHAEMNAVLQCSKFGVATDGAEIYVTDFPCLQCTKMLLQTGIVKIN 118
Query: 198 YM 199
Y+
Sbjct: 119 YL 120
Score = 36.6 bits (83), Expect = 5.9, Method: Compositional matrix adjust.
Identities = 22/73 (30%), Positives = 40/73 (54%), Gaps = 2/73 (2%)
Query: 1 MNAIL--NKNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIYMCDKHKQKPATIASKRM 58
MNA+L +K T ++Y + FPC +C K+++Q+GI ++ Y+ + + A KR
Sbjct: 77 MNAVLQCSKFGVATDGAEIYVTDFPCLQCTKMLLQTGIVKINYLRNYNNDPYAVALLKRK 136
Query: 59 FDAAKVHYWSEMD 71
A K +++ D
Sbjct: 137 NVAVKQIKFTDED 149
>gi|372209874|ref|ZP_09497676.1| CMP/dCMP deaminase zinc-binding protein [Flavobacteriaceae
bacterium S85]
Length = 146
Score = 72.0 bits (175), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 47/119 (39%), Positives = 65/119 (54%), Gaps = 11/119 (9%)
Query: 85 VDDVLEWHEYFMASAFLVAKRSKDPVTRVGAVIVNEDNKIVGTGYNGMPIG---CSDDEF 141
D L++ ++ AF AK S +VGA+IV +D I+ GYNG P G C +DE
Sbjct: 5 TDKQLKYDTAYLRIAFEWAKLSHCERKKVGAIIV-KDRMIISDGYNGTPTGFDNCCEDE- 62
Query: 142 PWDKNTHDELDMCHAEMNAILN--KNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIY 198
N + + HAE NAIL ++ TK LY +L PC +C+K+I QSGI V+Y
Sbjct: 63 ----NNETKWMVLHAEANAILKVAASTQSTKGATLYITLSPCKDCSKLIHQSGITRVVY 117
Score = 40.4 bits (93), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 20/42 (47%), Positives = 27/42 (64%), Gaps = 2/42 (4%)
Query: 2 NAILN--KNSADTKRCKLYTSLFPCNECAKVIIQSGIKEVIY 41
NAIL ++ TK LY +L PC +C+K+I QSGI V+Y
Sbjct: 76 NAILKVAASTQSTKGATLYITLSPCKDCSKLIHQSGITRVVY 117
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.319 0.132 0.411
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 3,104,954,941
Number of Sequences: 23463169
Number of extensions: 123298021
Number of successful extensions: 289574
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 1244
Number of HSP's successfully gapped in prelim test: 3579
Number of HSP's that attempted gapping in prelim test: 281912
Number of HSP's gapped (non-prelim): 9694
length of query: 207
length of database: 8,064,228,071
effective HSP length: 136
effective length of query: 71
effective length of database: 9,168,204,383
effective search space: 650942511193
effective search space used: 650942511193
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 73 (32.7 bits)