RPS-BLAST 2.2.26 [Sep-21-2011]
Database: scop70_1_75
13,730 sequences; 2,407,596 total letters
Searching..................................................done
Query= psy6807
(395 letters)
>d1e2ka_ c.37.1.1 (A:) Thymidine kinase {Herpes simplex virus type
1, different strains [TaxId: 10298]}
Length = 329
Score = 85.4 bits (211), Expect = 3e-19
Identities = 30/198 (15%), Positives = 55/198 (27%), Gaps = 20/198 (10%)
Query: 72 IVVEGPIASGKTEFCKKLADELDMIALPPANMDMFYKRGDFDWRSLDAEWSNENLKSYDE 131
+ ++GP GKT + L + M Y R ++ + D+
Sbjct: 7 VYIDGPHGMGKTTTTQLLVALGSRDDIVYVPEPMTYWRVLGASETIANIY--TTQHRLDQ 64
Query: 132 KTFCKDPKHFHTIAFQIRMLQLRFSVYVDALAHMLS---------TGQGAIVQRCPFSDF 182
+ QI M H+ I R P +
Sbjct: 65 GEISAGDAAVVMTSAQITMGMPYAVTDAVLAPHIGGEAGSSHAPPPALTLIFDRHPIAAL 124
Query: 183 -IFIEAMDKCGYITKRHKDIYYEITRFTLPPLFKPHLVIYLDIPVSKVKENVKKRNNPWE 241
+ A G +T + + + +PP ++ +P + + + KR P E
Sbjct: 125 LCYPAARYLMGSMTPQAVLAFVAL----IPPTLPGTNIVLGALPEDRHIDRLAKRQRPGE 180
Query: 242 VNSPIFNDKYLHEIEDLY 259
L I +Y
Sbjct: 181 RLDL----AMLAAIRRVY 194
>d1p6xa_ c.37.1.1 (A:) Thymidine kinase {Equine herpesvirus type 4
[TaxId: 10331]}
Length = 333
Score = 84.3 bits (208), Expect = 8e-19
Identities = 25/196 (12%), Positives = 51/196 (26%), Gaps = 16/196 (8%)
Query: 72 IVVEGPIASGKTEFCKKLADEL---DMIALPPANMDMFYKRGDFDW----RSLDAEWSNE 124
I ++G GK+ + +A P M + + D
Sbjct: 9 IYLDGVYGIGKSTTGRVMASAASGGSPTLYFPEPMAYWRTLFETDVISGIYDTQNRKQQG 68
Query: 125 NLKSYDEKTFCKDPKHFHTIAFQIRMLQLRFSVYVDALAHMLSTGQGAIVQRCPFSD-FI 183
NL D + T + I ++L + R P +
Sbjct: 69 NLAVDDAALITAHYQSRFTTPYLILHDHTCTLFGGNSLQRGTQPDLTLVFDRHPVASTVC 128
Query: 184 FIEAMDKCGYITKRHKDIYYEITRFTLPPLFKPHLVIYLDIPVSKVKENVKKRNNPWEVN 243
F A G ++ LP + ++ + V + ++ R E
Sbjct: 129 FPAARYLLGDMSMCALMAMVAT----LPREPQGGNIVVTTLNVEEHIRRLRTRARIGEQI 184
Query: 244 SPIFNDKYLHEIEDLY 259
+ + ++Y
Sbjct: 185 DI----TLIATLRNVY 196
>d1osna_ c.37.1.1 (A:) Thymidine kinase {Varicella-zoster virus
[TaxId: 10335]}
Length = 331
Score = 75.0 bits (184), Expect = 1e-15
Identities = 26/206 (12%), Positives = 54/206 (26%), Gaps = 32/206 (15%)
Query: 72 IVVEGPIASGKTEFCKKLADELDMIALPPANMDMFYKRGDFDWRSLDAEWSNENLKSYDE 131
I ++G GKT ++ + + WR+L E + + Y
Sbjct: 8 IYLDGAYGIGKTTAAEEFLHHFAITPNRI----LLIGEPLSYWRNLAGEDAICGI--YGT 61
Query: 132 KTFCKDPKHF-HTIAFQIRMLQLRFSVYVDALAHMLSTGQGA----------------IV 174
+T + Q F + +S +
Sbjct: 62 QTRRLNGDVSPEDAQRLTAHFQSLFCSPHAIMHAKISALMDTSTSDLVQVNKEPYKIMLS 121
Query: 175 QRCPFSD-FIFIEAMDKCGYITKRHKDIYYEITRFTLPPLFKPHLVIYLDIPVSKVKENV 233
R P + F + G ++ LP ++ + + V
Sbjct: 122 DRHPIASTICFPLSRYLVGDMSPAALPGLLFT----LPAEPPGTNLVVCTVSLPSHLSRV 177
Query: 234 KKRNNPWEVNSPIFNDKYLHEIEDLY 259
KR P E + ++ + ++Y
Sbjct: 178 SKRARPGETVNL----PFVMVLRNVY 199
>d2ocpa1 c.37.1.1 (A:37-277) Deoxyguanosine kinase {Human (Homo
sapiens) [TaxId: 9606]}
Length = 241
Score = 65.4 bits (158), Expect = 9e-13
Identities = 36/235 (15%), Positives = 70/235 (29%), Gaps = 17/235 (7%)
Query: 70 KIIVVEGPIASGKTEFCKKLADELDMIALPPANMDMFYKRGDFDWRSLDAEWSNENLKSY 129
+ + +EG IA GK+ F K L + + + + S NL
Sbjct: 3 RRLSIEGNIAVGKSTFVKLLTKTYPEWHVATEPVATWQNIQAAGNQKACTAQSLGNLLDM 62
Query: 130 DEKTFCKDPKHFHTIAFQIRMLQLRFSVYVDALAHMLSTGQGAIVQRCPFSDFIFIEAMD 189
+ + F T +F R+ L + +IF + +
Sbjct: 63 MYREPARWSYTFQTFSFLSRLKVQLEPFPEKLLQAR--KPVQIFERSVYSDRYIFAKNLF 120
Query: 190 KCGYITKRHKDI---YYEITRFTLPPLFKPHLVIYLDIPVSKVKENVKKRNNPWEVNSPI 246
+ G ++ I ++ + H IYL + + +R E +
Sbjct: 121 ENGSLSDIEWHIYQDWHSFLLWEFASRITLHGFIYLQASPQVCLKRLYQRAREEEKGIEL 180
Query: 247 FNDKYLHEIEDLY-------KNNYLPQISDSSELLVYDWSDGGDPEVVVEDIERI 294
YL ++ + + + +LV D +D D V E +
Sbjct: 181 ---AYLEQLHGQHEAWLIHKTTKLHFEALMNIPVLVLDVND--DFSEEVTKQEDL 230
>d1p5zb_ c.37.1.1 (B:) Deoxycytidine kinase {Human (Homo sapiens)
[TaxId: 9606]}
Length = 241
Score = 58.9 bits (141), Expect = 1e-10
Identities = 31/237 (13%), Positives = 66/237 (27%), Gaps = 16/237 (6%)
Query: 69 SKIIVVEGPIASGKTEFCKKLADELDMIALPPANMDM---FYKRGDFDWRSLDAEWSNEN 125
K I +EG IA+GK+ F L + + P + D ++ + N
Sbjct: 2 IKKISIEGNIAAGKSTFVNILKQLCEDWEVVPEPVARWCNVQSTQDEFEELTMSQKNGGN 61
Query: 126 LKSYDEKTFCKDPKHFHTIAFQIRMLQLRFSVYVDALAHMLST-GQGAIVQRCPFSDFIF 184
+ + + F T A R+ S+ V +
Sbjct: 62 VLQMMYEKPERWSFTFQTYACLSRIRAQLASLNGKLKDAEKPVLFFERSVYSDRYIFASN 121
Query: 185 IEAMDKCGYITKRHKDIYYEITRFTLPPLFKPHLVIYLDIPVSKVKENVKKRNNPWEVNS 244
+ + +++ + +IYL + R E
Sbjct: 122 LYESECMNETEWTIYQDWHDWMNNQFGQSLELDGIIYLQATPETCLHRIYLRGRNEEQGI 181
Query: 245 PIFNDKYLHEIEDLYKN-------NYLPQISDSSELLVYDWSDGGDPEVVVEDIERI 294
P+ +YL ++ +++ +L D ++ D + E +
Sbjct: 182 PL---EYLEKLHYKHESWLLHRTLKTNFDYLQEVPILTLDVNE--DFKDKYESLVEK 233
>d2vp4a1 c.37.1.1 (A:12-208) Deoxyribonucleoside kinase {Fruit fly
(Drosophila melanogaster) [TaxId: 7227]}
Length = 197
Score = 55.4 bits (132), Expect = 1e-09
Identities = 36/218 (16%), Positives = 78/218 (35%), Gaps = 28/218 (12%)
Query: 64 RFNQNSK--IIVVEGPIASGKTEFCKKLADELDMIALPPANMDMFYKRGDFDWRSLDAEW 121
++ + ++ +++EG I SGKT + + I L ++ + +
Sbjct: 2 KYAEGTQPFTVLIEGNIGSGKTTYLNHFEKYKNDICLLTEPVEKWRNVNGVNLL-ELMYK 60
Query: 122 SNENLKSYDEKTFCKDPKHFHTIAFQIRMLQLRFSVYVDALAHMLSTGQGAIVQRCPFSD 181
+ + HT ++ + S++
Sbjct: 61 DPKKWAMPFQSYVTLTMLQSHTAPTNKKLKIMERSIFSA--------------------R 100
Query: 182 FIFIEAMDKCGYITKRHKDIYYEITRFTLPPLFKPH-LVIYLDIPVSKVKENVKKRNNPW 240
+ F+E M + G + + + E +F + L+IYL E +++R
Sbjct: 101 YCFVENMRRNGSLEQGMYNTLEEWYKFIEESIHVQADLIIYLRTSPEVAYERIRQRARSE 160
Query: 241 EVNSPIFNDKYLHEIEDLYKNNYLPQIS-DSSELLVYD 277
E P+ KYL E+ +L+++ + Q S ++LV D
Sbjct: 161 ESCVPL---KYLQELHELHEDWLIHQRRPQSCKVLVLD 195
>d1khta_ c.37.1.1 (A:) Adenylate kinase {Archaeon Methanococcus
voltae [TaxId: 2188]}
Length = 190
Score = 42.3 bits (98), Expect = 3e-05
Identities = 14/92 (15%), Positives = 25/92 (27%), Gaps = 4/92 (4%)
Query: 69 SKIIVVEGPIASGKTEFCKKLADELDMIALPPANMDMFYKRGDFDWRSLDAEWSNENLKS 128
+K++VV G G T + D L + G + E +
Sbjct: 1 NKVVVVTGVPGVGSTTSSQLAMDNLRKEGVNY----KMVSFGSVMFEVAKEENLVSDRDQ 56
Query: 129 YDEKTFCKDPKHFHTIAFQIRMLQLRFSVYVD 160
+ + +I + V VD
Sbjct: 57 MRKMDPETQKRIQKMAGRKIAEMAKESPVAVD 88
>d1knqa_ c.37.1.17 (A:) Gluconate kinase {Escherichia coli [TaxId:
562]}
Length = 171
Score = 40.0 bits (92), Expect = 2e-04
Identities = 18/116 (15%), Positives = 28/116 (24%), Gaps = 5/116 (4%)
Query: 66 NQNSKIIVVEGPIASGKTEFCKKLADELD-----MIALPPANMDMFYKRGDFDWRSLDAE 120
N + I V+ G SGK+ ++A +L L P G+
Sbjct: 3 NHDHHIYVLMGVSGSGKSAVASEVAHQLHAAFLDGDFLHPRRNIEKMASGEPLNDDDRKP 62
Query: 121 WSNENLKSYDEKTFCKDPKHFHTIAFQIRMLQLRFSVYVDALAHMLSTGQGAIVQR 176
W + A + L + L I R
Sbjct: 63 WLQALNDAAFAMQRTNKVSLIVCSALKKHYRDLLREGNPNLSFIYLKGDFDVIESR 118
>d1lw7a2 c.37.1.1 (A:220-411) Transcriptional regulator NadR,
ribosylnicotinamide kinase domain {Haemophilus
influenzae [TaxId: 727]}
Length = 192
Score = 40.1 bits (92), Expect = 2e-04
Identities = 14/167 (8%), Positives = 42/167 (25%)
Query: 69 SKIIVVEGPIASGKTEFCKKLADELDMIALPPANMDMFYKRGDFDWRSLDAEWSNENLKS 128
+K + + G +SGK+ KLA + + + +++ D +++ +
Sbjct: 7 AKTVAILGGESSGKSVLVNKLAAVFNTTSAWEYGREFVFEKLGGDEQAMQYSDYPQMALG 66
Query: 129 YDEKTFCKDPKHFHTIAFQIRMLQLRFSVYVDALAHMLSTGQGAIVQRCPFSDFIFIEAM 188
+ + + + +
Sbjct: 67 HQRYIDYAVRHSHKIAFIDTDFITTQAFCIQYEGKAHPFLDSMIKEYPFDVTILLKNNTE 126
Query: 189 DKCGYITKRHKDIYYEITRFTLPPLFKPHLVIYLDIPVSKVKENVKK 235
+ + + L L + V Y++I + +
Sbjct: 127 WVDDGLRSLGSQKQRQQFQQLLKKLLDKYKVPYIEIESPSYLDRYNQ 173
>d4tmka_ c.37.1.1 (A:) Thymidylate kinase {Escherichia coli [TaxId:
562]}
Length = 210
Score = 39.9 bits (92), Expect = 2e-04
Identities = 36/226 (15%), Positives = 66/226 (29%), Gaps = 25/226 (11%)
Query: 69 SKIIVVEGPIASGKTEFCKKLADELDMIALPPANMDMFYKRGDFDWRSLDAEWSNENLKS 128
SK IV+EG +GKT + + L+ + + + AE L
Sbjct: 2 SKYIVIEGLEGAGKTTARNVVVETLEQLGIRD------MVFTREPGGTQLAEKLRSLLLD 55
Query: 129 YDEKTFCKDPKHFHTIAFQIRMLQLRFSVYVDALAHMLSTGQGAIVQRCPFSDFIFIEAM 188
+ F +QL +V ALA+ D +
Sbjct: 56 IKSVGDEVITDKAEVLMFYAARVQLVETVIKPALAN----------GTWVIGDRHDLSTQ 105
Query: 189 DKCGYITKRHKDIYYEITRFTLPPLFKPHLVIYLDIPVSKVKENVKKRNNPWEVNSPIFN 248
G + + + L F+P L +YLD+ + + R +
Sbjct: 106 AYQGGGRGIDQHMLATLRDAVLGD-FRPDLTLYLDVTPEVGLKRARARG--ELDRIEQES 162
Query: 249 DKYLHEIEDLYKNNYLPQISDSSELLVYDWSDGGDPEVVVEDIERI 294
+ + + YL + + D + E V++ I
Sbjct: 163 FDFFNRT----RARYLELAAQDKSIHTIDAT--QPLEAVMDAIRTT 202
>d1gsia_ c.37.1.1 (A:) Thymidylate kinase {Mycobacterium
tuberculosis [TaxId: 1773]}
Length = 208
Score = 39.7 bits (91), Expect = 2e-04
Identities = 32/224 (14%), Positives = 60/224 (26%), Gaps = 21/224 (9%)
Query: 71 IIVVEGPIASGKTEFCKKLADELDMIALPPANMDMFYKRGDFDWRSLDAEWSNENLKSYD 130
+I +EG +GK +KL+ A + +S+ A+ + E L
Sbjct: 2 LIAIEGVDGAGKRTLVEKLSGAFRA-----AGRSVATLAFPRYGQSVAADIAAEALHGEH 56
Query: 131 EKTFCKDPKHFHTIAFQIRMLQLRFSVYVDALAHMLSTGQGAIVQRCPFSDFIFIEAMDK 190
+ L + V + + I+ R S+ + A
Sbjct: 57 GDLASSVYAMAT-------LFALDRAGAVHTIQGLCRGYDVVILDRYVASNAAYSAARLH 109
Query: 191 CGYITKRHKDIYYEITRFTLPPLFKPHLVIYLDIPVSKVKENVKKRNNPWEVNSPIFNDK 250
K + + F L KP + L + E + R + ++
Sbjct: 110 ENAAGKAAAWV--QRIEFARLGLPKPDWQVLLAVSAELAGERSRGRAQRDPGRARDNYER 167
Query: 251 ---YLHEIEDLYKNNYLPQISDSSELLVYDWSDGGDPEVVVEDI 291
+Y L LV DP + +
Sbjct: 168 DAELQQRTGAVYAE--LAAQGWGGRWLVVGAD--VDPGRLAATL 207
>d1qf9a_ c.37.1.1 (A:) UMP/CMP kinase {Dictyostelium discoideum
[TaxId: 44689]}
Length = 194
Score = 38.0 bits (87), Expect = 7e-04
Identities = 24/183 (13%), Positives = 50/183 (27%), Gaps = 19/183 (10%)
Query: 70 KIIVVEGPIASGKTEFCKKLADELDMIALPPANM---------------DMFYKRGDFDW 114
++ V G SGK C + + + L ++ K G+
Sbjct: 7 NVVFVLGGPGSGKGTQCANIVRDFGWVHLSAGDLLRQEQQSGSKDGEMIATMIKNGEIVP 66
Query: 115 RSLDAEWSNENLKSYDEKTFCKDPKHFHTIAFQIRMLQLRFSVYVDALAHMLSTGQGAIV 174
+ + + + K F D + + + +
Sbjct: 67 SIVTVKLLKNAIDANQGKNFLVDGFPRN-EENNNSWEENMKDFVDTKFVLFFDCPEEVMT 125
Query: 175 QRCPFSDFIFIEAMDKCGYITKRHKDIYYEITRFTLPPLFKPHLVIYLDI--PVSKVKEN 232
QR + D I KR + + T+ + K V + V++V +
Sbjct: 126 QRLLKRGESSGRSDDNIESIKKRF-NTFNVQTKLVIDHYNKFDKVKIIPANRDVNEVYND 184
Query: 233 VKK 235
V+
Sbjct: 185 VEN 187
>d2bdta1 c.37.1.25 (A:1-176) Hypothetical protein BH3686 {Bacillus
halodurans [TaxId: 86665]}
Length = 176
Score = 37.7 bits (86), Expect = 0.001
Identities = 18/168 (10%), Positives = 46/168 (27%), Gaps = 4/168 (2%)
Query: 69 SKIIVVEGPIASGKTEFCKKLADELDMIALPPANMDMFYKRGDF-DWRSLDAEWSNENLK 127
K+ ++ GP GK+ CK+LA +LD A ++ G + D +
Sbjct: 2 KKLYIITGPAGVGKSTTCKRLAAQLDNSAYIEGDIINHMVVGGYRPPWESDELLALTWKN 61
Query: 128 SYDEKTFCKDPKHFHTIAFQIRMLQLRFSVYVDALAHMLSTGQGAIVQRCPFSDFIFIEA 187
D ++ + + + + + +
Sbjct: 62 ITDLTVNFLLAQNDVVLDYIAFPDEAE---ALAQTVQAKVDDVEIRFIILWTNREELLRR 118
Query: 188 MDKCGYITKRHKDIYYEITRFTLPPLFKPHLVIYLDIPVSKVKENVKK 235
+ + + F + + + + + + + VK
Sbjct: 119 DALRKKDEQMGERCLELVEEFESKGIDERYFYNTSHLQPTNLNDIVKN 166
>d1a7ja_ c.37.1.6 (A:) Phosphoribulokinase {Rhodobacter sphaeroides
[TaxId: 1063]}
Length = 288
Score = 38.0 bits (88), Expect = 0.001
Identities = 16/158 (10%), Positives = 36/158 (22%), Gaps = 6/158 (3%)
Query: 71 IIVVEGPIASGKTEFCKKLADELDMIALPPA--NMDMFYKRGDFDWRSLDAEWSNENLKS 128
II V G +G + + D F++ D ++ +
Sbjct: 6 IISVTGSSGAGTSTVKHTFDQIFRREGVKAVSIEGDAFHRFNRADMKAELDRRYAAGDAT 65
Query: 129 YDEKTFCKDPKHFHTIAFQIRMLQLRFSVYVDALAHMLSTGQGAIVQRCPFSDFIFIEAM 188
+ F + + R H + V F+D+
Sbjct: 66 FSH--FSYEANELKELERVFREYGETGQGRTRTYVHDDAEAARTGVAPGNFTDWRDF--D 121
Query: 189 DKCGYITKRHKDIYYEITRFTLPPLFKPHLVIYLDIPV 226
+ + + L + + I +
Sbjct: 122 SDSHLLFYEGLHGAVVNSEVNIAGLADLKIGVVPVINL 159
>d1nksa_ c.37.1.1 (A:) Adenylate kinase {Archaeon Sulfolobus
acidocaldarius [TaxId: 2285]}
Length = 194
Score = 37.7 bits (86), Expect = 0.001
Identities = 8/24 (33%), Positives = 12/24 (50%)
Query: 70 KIIVVEGPIASGKTEFCKKLADEL 93
KI +V G GK+ K+ + L
Sbjct: 2 KIGIVTGIPGVGKSTVLAKVKEIL 25
>d1e4va1 c.37.1.1 (A:1-121,A:157-214) Adenylate kinase {Escherichia
coli [TaxId: 562]}
Length = 179
Score = 37.2 bits (85), Expect = 0.001
Identities = 15/139 (10%), Positives = 39/139 (28%), Gaps = 3/139 (2%)
Query: 72 IVVEGPIASGKTEFCKKLADELDMIALPPANMDMFYKRGDFDWRSLDAEWSNENLKSYDE 131
I++ G +GK + + ++ + + +M + + + + DE
Sbjct: 3 IILLGAPVAGKGTQAQFIMEKYGIPQISTGDMLRAAVKSGSELGKQAKDIMDAGKLVTDE 62
Query: 132 KTFCKDPKHFHTIAFQIRMLQLRFSVYVDALAHMLSTG---QGAIVQRCPFSDFIFIEAM 188
+ + L F + M G + P +
Sbjct: 63 LVIALVKERIAQEDCRNGFLLDGFPRTIPQADAMKEAGINVDYVLEFDVPDELIVDRIVK 122
Query: 189 DKCGYITKRHKDIYYEITR 207
D ++ Y+++T
Sbjct: 123 DDQEETVRKRLVEYHQMTA 141
>d1qhxa_ c.37.1.3 (A:) Chloramphenicol phosphotransferase
{Streptomyces venezuelae [TaxId: 54571]}
Length = 178
Score = 35.4 bits (80), Expect = 0.005
Identities = 8/83 (9%), Positives = 23/83 (27%)
Query: 68 NSKIIVVEGPIASGKTEFCKKLADELDMIALPPANMDMFYKRGDFDWRSLDAEWSNENLK 127
+++I++ G ++GK+ + L L L + + + +
Sbjct: 2 TTRMIILNGGSSAGKSGIVRCLQSVLPEPWLAFGVDSLIEAMPLKMQSAEGGIEFDADGG 61
Query: 128 SYDEKTFCKDPKHFHTIAFQIRM 150
F + +
Sbjct: 62 VSIGPEFRALEGAWAEGVVAMAR 84
>d2ak3a1 c.37.1.1 (A:0-124,A:162-225) Adenylate kinase {Cow (Bos
taurus), mitochondrial izozyme-3 [TaxId: 9913]}
Length = 189
Score = 35.2 bits (80), Expect = 0.006
Identities = 16/135 (11%), Positives = 36/135 (26%), Gaps = 1/135 (0%)
Query: 72 IVVEGPIASGKTEFCKKLADELDMIALPPANMDMFYKRGDFDWRSLDAEWSNENLKSYDE 131
+ G SGK ++ ++ L ++ + L + ++ D+
Sbjct: 9 AAIMGAPGSGKGTVSSRITKHFELKHLSSGDLLRDNMLRGTEIGVLAKTFIDQGKLIPDD 68
Query: 132 KTFCKDPKHFHTIAFQIRMLQLRFSVYVDALAHMLSTGQGAIVQRCPFSDFIFIEAMDKC 191
+ +L A A + ++ + I D+
Sbjct: 69 VMTRLVLHELKNLTQYNWLLDGFPRTLPQAEALDRAYQIDTVINLNVPFEVIKQRLTDRP 128
Query: 192 GYITKRHKDIYYEIT 206
+ KR Y T
Sbjct: 129 ETVVKRL-KAYEAQT 142
>d1uj2a_ c.37.1.6 (A:) Uridine-cytidine kinase 2 {Human (Homo
sapiens) [TaxId: 9606]}
Length = 213
Score = 35.3 bits (80), Expect = 0.008
Identities = 21/147 (14%), Positives = 38/147 (25%), Gaps = 7/147 (4%)
Query: 71 IIVVEGPIASGKTEFCKKLADELDMIALPPAN-------MDMFYKRGDFDWRSLDAEWSN 123
+I V G ASGK+ C K+ L + D FY+ + ++ +
Sbjct: 4 LIGVSGGTASGKSSVCAKIVQLLGQNEVDYRQKQVVILSQDSFYRVLTSEQKAKALKGQF 63
Query: 124 ENLKSYDEKTFCKDPKHFHTIAFQIRMLQLRFSVYVDALAHMLSTGQGAIVQRCPFSDFI 183
+ + + V ++ +V F
Sbjct: 64 NFDHPDAFDNELILKTLKEITEGKTVQIPVYDFVSHSRKEETVTVYPADVVLFEGILAFY 123
Query: 184 FIEAMDKCGYITKRHKDIYYEITRFTL 210
E D D ++R L
Sbjct: 124 SQEVRDLFQMKLFVDTDADTRLSRRVL 150
>d1ckea_ c.37.1.1 (A:) CMP kinase {Escherichia coli [TaxId: 562]}
Length = 225
Score = 34.7 bits (78), Expect = 0.011
Identities = 29/227 (12%), Positives = 57/227 (25%), Gaps = 17/227 (7%)
Query: 71 IIVVEGPIASGKTEFCKKLADELDMIALPPANMDMFYKRGDFDWRSLDAEWSNENLK--- 127
+I ++GP +GK CK +A+ L L + +R L + ++
Sbjct: 5 VITIDGPSGAGKGTLCKAMAEALQWHLLDSGAI----------YRVLALAALHHHVDVAS 54
Query: 128 SYDEKTFCKDPKHFHTIAFQIRMLQLRFSVYVDALAHMLSTGQGAIVQRCPFSDFIFIEA 187
+ L + + V P +
Sbjct: 55 EDALVPLASHLDVRFVSTNGNLEVILEGEDVSGEIRTQEVANAASQVAAFPRVREALLRR 114
Query: 188 MDKCGYITKRHKDIYYEITRFTLPPLFKPHLVIYLDIPVSKVKENVKKRNNPWEVNSPIF 247
+ D T K L + + ++ + +
Sbjct: 115 QRAFRELPGLIADGRDMGTVVFPDAPVKIFLDASSEERAHRRMLQLQVKGFSVNFERLLA 174
Query: 248 NDKYLHEIEDLYKNNYLPQISDSSELLVYDWSDGGDPEVVVEDIERI 294
K + + L +D+ LV D S E V+E +
Sbjct: 175 EIKERDDRDRNRAVAPLVPAADA---LVLD-STTLSIEQVIEKALQY 217
>d1teva_ c.37.1.1 (A:) UMP/CMP kinase {Human (Homo sapiens) [TaxId:
9606]}
Length = 194
Score = 34.2 bits (77), Expect = 0.013
Identities = 18/148 (12%), Positives = 42/148 (28%), Gaps = 9/148 (6%)
Query: 70 KIIVVEGPIASGKTEFCKKLADEL--------DMIALPPANMDMFYKRGDFDWRSLDAEW 121
++ V G +GK C ++ ++ +++ N D Y +
Sbjct: 2 LVVFVLGGPGAGKGTQCARIVEKYGYTHLSAGELLRDERKNPDSQYGELIEKYIKEGKIV 61
Query: 122 SNENLKSYDEKTFCKDPKHFHTIAFQIRMLQLRFSVYVDALAHMLSTGQG-AIVQRCPFS 180
E S ++ + + R + + + V +
Sbjct: 62 PVEITISLLKREMDQTMAANAQKNKFLIDGFPRNQDNLQGWNKTMDGKADVSFVLFFDCN 121
Query: 181 DFIFIEAMDKCGYITKRHKDIYYEITRF 208
+ I IE + G + R D + +
Sbjct: 122 NEICIERCLERGKSSGRSDDNRESLEKR 149
>d1rz3a_ c.37.1.6 (A:) Hypothetical protein rbstp0775 {Bacillus
stearothermophilus [TaxId: 1422]}
Length = 198
Score = 33.6 bits (75), Expect = 0.021
Identities = 9/51 (17%), Positives = 17/51 (33%)
Query: 71 IIVVEGPIASGKTEFCKKLADELDMIALPPANMDMFYKRGDFDWRSLDAEW 121
++ ++G SGKT +L+ L + M + R
Sbjct: 24 VLGIDGLSRSGKTTLANQLSQTLREQGISVCVFHMDDHIVERAKRYHTGNE 74
>d1sq5a_ c.37.1.6 (A:) Pantothenate kinase PanK {Escherichia coli
[TaxId: 562]}
Length = 308
Score = 33.9 bits (77), Expect = 0.024
Identities = 28/194 (14%), Positives = 48/194 (24%), Gaps = 20/194 (10%)
Query: 71 IIVVEGPIASGKTEFCKKLADELDMIALPPA----NMDMFYKRGDFDWRSLDAEWSNENL 126
II + G +A GK+ + L L D F + L
Sbjct: 82 IISIAGSVAVGKSTTARVLQALLSRWPEHRRVELITTDGFLHP--------NQVLKERGL 133
Query: 127 KSYDEKTFCKDPKHFHTIAFQIRMLQLRFSVYVDALAHMLSTGQGAIVQRCPFSDFIFIE 186
D ++ + V + G P D + +E
Sbjct: 134 MKKKGFPESYDMHRLVKFVSDLKSGVPNVTAPVYSHLIYDVIPDGDKTVVQP--DILILE 191
Query: 187 AMDKCGYITKRHKDIYYEITRFTLPPLFKPHLVIYLDIPVSKVKENVKKRNNPWEVNSPI 246
++ D ++ IY+D P ++ R + +
Sbjct: 192 GLNVLQSGMDYPHDPHHVFVS----DFV--DFSIYVDAPEDLLQTWYINRFLKFREGAFT 245
Query: 247 FNDKYLHEIEDLYK 260
D Y H L K
Sbjct: 246 DPDSYFHNYAKLTK 259
>d1zp6a1 c.37.1.25 (A:6-181) Hypothetical protein Atu3015
{Agrobacterium tumefaciens [TaxId: 358]}
Length = 176
Score = 33.0 bits (74), Expect = 0.031
Identities = 7/30 (23%), Positives = 15/30 (50%)
Query: 66 NQNSKIIVVEGPIASGKTEFCKKLADELDM 95
+ I+++ G SGK+ + LA+ +
Sbjct: 1 DLGGNILLLSGHPGSGKSTIAEALANLPGV 30
>d1nn5a_ c.37.1.1 (A:) Thymidylate kinase {Human (Homo sapiens)
[TaxId: 9606]}
Length = 209
Score = 33.4 bits (75), Expect = 0.032
Identities = 9/24 (37%), Positives = 15/24 (62%)
Query: 70 KIIVVEGPIASGKTEFCKKLADEL 93
+IV+EG +GK+ +KL + L
Sbjct: 4 ALIVLEGVDRAGKSTQSRKLVEAL 27
>d1q3ta_ c.37.1.1 (A:) CMP kinase {Streptococcus pneumoniae [TaxId:
1313]}
Length = 223
Score = 32.7 bits (73), Expect = 0.048
Identities = 27/227 (11%), Positives = 62/227 (27%), Gaps = 16/227 (7%)
Query: 71 IIVVEGPIASGKTEFCKKLADELDMIALPPANMDMFYKRGDFDWRSLDAEWSNENLKSYD 130
I ++GP +SGK+ K +A + L M +R+ L +
Sbjct: 5 QIAIDGPASSGKSTVAKIIAKDFGFTYLDTGAM----------YRAATYMALKNQLGVEE 54
Query: 131 EKTFCKDPKHFHTIAFQIRMLQLRFSVYVDALAHMLSTGQGAIVQRCPFSDFIFIEAMDK 190
+ + V + H + + + E +
Sbjct: 55 VEALLALLDQHPISFGRSETGDQLVFVGDVDITHPIRENEVTNHVSAIAAIPEVREKLVS 114
Query: 191 CGYITKRHKDIYYEITRFTLPPLFKPHLVIYLDIPVSKVKENVKKRNNPWEVNSPIFNDK 250
+ I + + P + + + S + ++ +
Sbjct: 115 LQQEIAQQGGIVMDGRDI--GTVVLPQAELKIFLVASVDERAERRYKENIAKGIETDLET 172
Query: 251 YLHEIEDLYKNNYLPQISD---SSELLVYDWSDGGDPEVVVEDIERI 294
EI + + S + + + D + G + + VVE I+
Sbjct: 173 LKKEIAARDYKDSHRETSPLKQAEDAVYLD-TTGLNIQEVVEKIKAE 218
>d1zaka1 c.37.1.1 (A:3-127,A:159-222) Adenylate kinase {Maize (Zea
mays) [TaxId: 4577]}
Length = 189
Score = 32.5 bits (73), Expect = 0.050
Identities = 22/172 (12%), Positives = 46/172 (26%), Gaps = 4/172 (2%)
Query: 68 NSKIIVVEGPIASGKTEFCKKLADELDMIALPPANMDMFYKRGDFDWRSLDAEWSNENLK 127
+ +++ G ASGK C+ + + + + ++ + E+ +
Sbjct: 2 DPLKVMISGAPASGKGTQCELIKTKYQLAHISAGDLLRAEIAAGSENGKRAKEFMEKGQL 61
Query: 128 SYDEKTFCKDPKHFHTIAFQIRMLQLRFSVYVDALAHMLSTGQGAIVQRCPFSDFIFIEA 187
DE + Q L + A L T + +
Sbjct: 62 VPDEIVVNMVKERLRQPDAQENGWLLDGYPRSYSQAMALETLEIRPDTFILLDVPDELLV 121
Query: 188 MDKCGYIT----KRHKDIYYEITRFTLPPLFKPHLVIYLDIPVSKVKENVKK 235
T K + YY+ L + + D V V + +
Sbjct: 122 ERVVFDDTEEKVKLRLETYYQNIESLLSTYENIIVKVQGDATVDAVFAKIDE 173
>d1tmka_ c.37.1.1 (A:) Thymidylate kinase {Baker's yeast
(Saccharomyces cerevisiae) [TaxId: 4932]}
Length = 214
Score = 32.6 bits (73), Expect = 0.058
Identities = 10/24 (41%), Positives = 15/24 (62%)
Query: 70 KIIVVEGPIASGKTEFCKKLADEL 93
K+I++EG +GKT C L +L
Sbjct: 4 KLILIEGLDRTGKTTQCNILYKKL 27
>d1akya1 c.37.1.1 (A:3-130,A:169-220) Adenylate kinase {Baker's
yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Length = 180
Score = 31.5 bits (70), Expect = 0.097
Identities = 15/145 (10%), Positives = 30/145 (20%), Gaps = 7/145 (4%)
Query: 69 SKIIVVEGPIASGKTEFCKKLADELDMIALPPANMDMFYKRGDFDWRSLDAEWSNENLKS 128
S +V+ GP +GK L + L +M + ++
Sbjct: 2 SIRMVLIGPPGAGKGTQAPNLQERFHAAHLATGDMLRSQIAKGTQLGLEAKKIMDQGGLV 61
Query: 129 YDEKTFCKDPKHF------HTIAFQIRMLQLRFSVYVDALAHMLSTGQGAIVQRCPFSDF 182
D+ + D
Sbjct: 62 SDDIMVNMIKDELTNNPACKNGFILDGFPRTIPQAEKLDQMLKEQGTPLEKAIELKVDDE 121
Query: 183 IFIEAMDKCGYITKRHKDIYYEITR 207
+ + + + KR Y+ T
Sbjct: 122 LLVARITNADALKKRL-AAYHAQTE 145
>d1yj5a2 c.37.1.1 (A:351-522) 5' polynucleotide kinase-3'
phosphatase, C-terminal domain {Mouse (Mus musculus)
[TaxId: 10090]}
Length = 172
Score = 31.0 bits (69), Expect = 0.15
Identities = 7/96 (7%), Positives = 25/96 (26%), Gaps = 3/96 (3%)
Query: 65 FNQNSKIIVVEGPIASGKTEFCKKLADELDMIALPPANMDMFYKRGDFDWRSLDAEWS-- 122
+ N +++V G +GK+ F ++ + + + + + +L
Sbjct: 10 LSPNPEVVVAVGFPGAGKSTFIQEHLVSAGYVHVNRDTLGSWQRCVSSCQAALRQGKRVV 69
Query: 123 -NENLKSYDEKTFCKDPKHFHTIAFQIRMLQLRFSV 157
+ + + +
Sbjct: 70 IDNTNPDVPSRARYIQCAKDAGVPCRCFNFCATIEQ 105
>d2i3ba1 c.37.1.11 (A:1-189) Cancer-related NTPase, C1orf57 {Human
(Homo sapiens) [TaxId: 9606]}
Length = 189
Score = 31.1 bits (69), Expect = 0.16
Identities = 20/201 (9%), Positives = 54/201 (26%), Gaps = 21/201 (10%)
Query: 69 SKIIVVEGPIASGKTEFCKKLADEL------DMIALPPANMDMFYKRGDFDWRSLDAEWS 122
++ + + GP GKT K ++ L + G FD +L
Sbjct: 1 ARHVFLTGPPGVGKTTLIHKASEVLKSSGVPVDGFYTEEVRQGGRRIG-FDVVTLSGTRG 59
Query: 123 NENLKSYDEKTFCKDPKHFHTIAFQIRMLQLRFSVYVDALAHMLSTGQGAIVQRCPFSDF 182
+ + ++ + + + + + GQ
Sbjct: 60 PLSRVGLEPPPGKRECRVGQYV-VDLTSFEQLALPVLRNADCSSGPGQ----------RV 108
Query: 183 IFIEAMDKCGYITKRHKDIYYEITRFTLPPLFKPHLVIYLDIPVSKVKENVKKRNNPWEV 242
I+ + K ++ + + + + E ++ R +
Sbjct: 109 CVIDEIGKMELFSQLFIQAVRQTLSTPGTIIL--GTIPVPKGKPLALVEEIRNRKDVKVF 166
Query: 243 N-SPIFNDKYLHEIEDLYKNN 262
N + + L +I +++
Sbjct: 167 NVTKENRNHLLPDIVTCVQSS 187
>d1e6ca_ c.37.1.2 (A:) Shikimate kinase (AroK) {Erwinia chrysanthemi
[TaxId: 556]}
Length = 170
Score = 30.7 bits (68), Expect = 0.17
Identities = 7/84 (8%), Positives = 17/84 (20%), Gaps = 2/84 (2%)
Query: 69 SKIIVVEGPIASGKTEFCKKLADELDM--IALPPANMDMFYKRGDFDWRSLDAEWSNENL 126
++ I + G G T ++LA L + +
Sbjct: 2 TEPIFMVGARGCGMTTVGRELARALGYEFVDTDIFMQHTSGMTVADVVAAEGWPGFRRRE 61
Query: 127 KSYDEKTFCKDPKHFHTIAFQIRM 150
+ + +
Sbjct: 62 SEALQAVATPNRVVATGGGMVLLE 85
>d1gkya_ c.37.1.1 (A:) Guanylate kinase {Baker's yeast
(Saccharomyces cerevisiae) [TaxId: 4932]}
Length = 186
Score = 30.7 bits (68), Expect = 0.19
Identities = 24/145 (16%), Positives = 47/145 (32%), Gaps = 6/145 (4%)
Query: 69 SKIIVVEGPIASGKTEFCKKLADELDMIALPPANMDMFYKRG------DFDWRSLDAEWS 122
S+ IV+ GP +GK+ KKL E + R D+++ S+D S
Sbjct: 1 SRPIVISGPSGTGKSTLLKKLFAEYPDSFGFSVSSTTRTPRAGEVNGKDYNFVSVDEFKS 60
Query: 123 NENLKSYDEKTFCKDPKHFHTIAFQIRMLQLRFSVYVDALAHMLSTGQGAIVQRCPFSDF 182
+ E + T+A ++ + + +D + + + F
Sbjct: 61 MIKNNEFIEWAQFSGNYYGSTVASVKQVSKSGKTCILDIDMQGVKSVKAIPELNARFLFI 120
Query: 183 IFIEAMDKCGYITKRHKDIYYEITR 207
D + R + I +
Sbjct: 121 APPSVEDLKKRLEGRGTETEESINK 145
>d1jjva_ c.37.1.1 (A:) Dephospho-CoA kinase {Haemophilus influenzae
[TaxId: 727]}
Length = 205
Score = 30.6 bits (68), Expect = 0.22
Identities = 24/191 (12%), Positives = 61/191 (31%), Gaps = 26/191 (13%)
Query: 69 SKIIVVEGPIASGKTEFCKKLAD------ELDMIA--------------LPPANMDMFYK 108
+ I+ + G I SGKT D + D++A + + +
Sbjct: 2 TYIVGLTGGIGSGKTTIANLFTDLGVPLVDADVVAREVVAKDSPLLSKIVEHFGAQILTE 61
Query: 109 RGDFDWRSLDAEWSNENLKSYDEKTFCKDPKHFHTIAFQIRMLQLRFSVYVDALAHMLST 168
+G+ + +L N + P + ++ ++++V L ++
Sbjct: 62 QGELNRAALRERVFNHDED-KLWLNNLLHPAIRERMKQKLAEQTAPYTLFVVPL--LIEN 118
Query: 169 GQGAIVQRCPFSDFIFIEAMDKCGYITKRHKDIYYEITRFTLPP---LFKPHLVIYLDIP 225
A+ R D + + + + I + L VI D
Sbjct: 119 KLTALCDRILVVDVSPQTQLARSAQRDNNNFEQIQRIMNSQVSQQERLKWADDVINNDAE 178
Query: 226 VSKVKENVKKR 236
+++ +++++
Sbjct: 179 LAQNLPHLQQK 189
>d1ly1a_ c.37.1.1 (A:) Polynucleotide kinase, kinase domain
{Bacteriophage T4 [TaxId: 10665]}
Length = 152
Score = 30.1 bits (66), Expect = 0.24
Identities = 13/121 (10%), Positives = 33/121 (27%), Gaps = 13/121 (10%)
Query: 70 KIIVVEGPIASGKTEFCKKLADEL-------------DMIALPPANMDMFYKRGDFDWRS 116
KII+ G SGK+ + ++ + ++A + + K+ +
Sbjct: 3 KIILTIGCPGSGKSTWAREFIAKNPGFYNINRDDYRQSIMAHEERDEYKYTKKKEGIVTG 62
Query: 117 LDAEWSNENLKSYDEKTFCKDPKHFHTIAFQIRMLQLRFSVYVDALAHMLSTGQGAIVQR 176
+ + + L D ++ + +V+R
Sbjct: 63 MQFDTAKSILYGGDSVKGVIISDTNLNPERRLAWETFAKEYGWKVEHKVFDVPWTELVKR 122
Query: 177 C 177
Sbjct: 123 N 123
>d3adka_ c.37.1.1 (A:) Adenylate kinase {Pig (Sus scrofa) [TaxId:
9823]}
Length = 194
Score = 30.3 bits (67), Expect = 0.25
Identities = 11/30 (36%), Positives = 15/30 (50%)
Query: 67 QNSKIIVVEGPIASGKTEFCKKLADELDMI 96
+ SKII V G SGK C+K+ +
Sbjct: 6 KKSKIIFVVGGPGSGKGTQCEKIVQKYGYT 35
>d1ak2a1 c.37.1.1 (A:14-146,A:177-233) Adenylate kinase {Cow (Bos
taurus), mitochondrial izozyme-2 [TaxId: 9913]}
Length = 190
Score = 30.3 bits (67), Expect = 0.26
Identities = 20/137 (14%), Positives = 35/137 (25%), Gaps = 1/137 (0%)
Query: 72 IVVEGPIASGKTEFCKKLADELDMIALPPANMDMFYKRGDFDWRSLDAEWSNENLKSYDE 131
V+ GP +GK KLA + L +M + + DE
Sbjct: 6 AVLLGPPGAGKGTQAPKLAKNFCVCHLATGDMLRAMVASGSELGKKLKATMDAGKLVSDE 65
Query: 132 KTFCKDPKHFHTIAFQIRMLQLRFSVYVDALAHMLSTGQGAIVQ-RCPFSDFIFIEAMDK 190
K+ T + L F V + + + I + +
Sbjct: 66 MVLELIEKNLETPPCKNGFLLDGFPRTVRQAEMLDDLMEKRKEKLDSVIEFSIPDSLLIR 125
Query: 191 CGYITKRHKDIYYEITR 207
H D + +
Sbjct: 126 RITGRLIHSDDNKKALK 142
>d1yrba1 c.37.1.10 (A:1-244) ATP(GTP)-binding protein PAB0955
{Pyrococcus abyssi [TaxId: 29292]}
Length = 244
Score = 30.7 bits (68), Expect = 0.27
Identities = 10/43 (23%), Positives = 16/43 (37%), Gaps = 6/43 (13%)
Query: 71 IIVVEGPIASGKTEFCKKLADELD------MIALPPANMDMFY 107
I+V G SGKT + L+ + L ++ Y
Sbjct: 2 IVVFVGTAGSGKTTLTGEFGRYLEDNYKVAYVNLDTGVKELPY 44
>d1y63a_ c.37.1.1 (A:) Probable kinase LmjF30.1890 {Leishmania major
[TaxId: 5664]}
Length = 174
Score = 30.0 bits (66), Expect = 0.30
Identities = 20/156 (12%), Positives = 44/156 (28%), Gaps = 15/156 (9%)
Query: 72 IVVEGPIASGKTEFCKKLADELDMIALPPANMDMFYKRGDFDWRSLDAEWSNENLKSYDE 131
I++ G +GKT + +A ELD + + + D E ++ DE
Sbjct: 8 ILITGTPGTGKTSMAEMIAAELDGF---QHLEVGKLVKENHFYTEYDTELDTHIIEEKDE 64
Query: 132 KTFCKDPKHFHTIAFQIRMLQLRFSVYVDALAHMLSTGQGAIVQRCPFSDFIFIEAMDKC 191
+ + + + +V S + E + K
Sbjct: 65 DRLLDFMEPIMVSRGNHVV--------DYHSSELFPERWFHMVVVLHTSTEVLFERLTKR 116
Query: 192 GYITKRHKD----IYYEITRFTLPPLFKPHLVIYLD 223
Y + + I ++ +V+ +
Sbjct: 117 QYSEAKRAENMEAEIQCICEEEARDAYEDDIVLVRE 152
>d1znwa1 c.37.1.1 (A:20-201) Guanylate kinase {Mycobacterium
tuberculosis [TaxId: 1773]}
Length = 182
Score = 30.0 bits (66), Expect = 0.32
Identities = 7/30 (23%), Positives = 16/30 (53%)
Query: 70 KIIVVEGPIASGKTEFCKKLADELDMIALP 99
+++V+ GP A GK+ + L + + +
Sbjct: 3 RVVVLSGPSAVGKSTVVRCLRERIPNLHFS 32
>d1zina1 c.37.1.1 (A:1-125,A:161-217) Adenylate kinase {Bacillus
stearothermophilus [TaxId: 1422]}
Length = 182
Score = 29.9 bits (66), Expect = 0.33
Identities = 13/173 (7%), Positives = 49/173 (28%), Gaps = 9/173 (5%)
Query: 72 IVVEGPIASGKTEFCKKLADELDMIALPPANMDMFYKRGDFDWRSLDAEWSNENLKSYDE 131
+V+ G +GK +K+ + + +M + ++ + DE
Sbjct: 3 LVLMGLPGAGKGTQAEKIVAAYGIPHISTGDMFRAAMKEGTPLGLQAKQYMDRGDLVPDE 62
Query: 132 KT------FCKDPKHFHTIAFQIRMLQLRFSVYVDALAHMLSTGQGAIVQRCPFSDFIFI 185
T + + + ++ + + ++ D +
Sbjct: 63 VTIGIVRERLSKDDCQNGFLLDGFPRTVAQAEALETMLADIGRKLDYVIHIDVRQDVLME 122
Query: 186 EAMDKCGYIT-KRHKDIYYEITRFTLPPLFKPHLVIYLD--IPVSKVKENVKK 235
T ++ + + + + + ++ + KV ++++
Sbjct: 123 RLTADDNEATVANRLEVNMKQMKPLVDFYEQKGYLRNINGEQDMEKVFADIRE 175
>d1s3ga1 c.37.1.1 (A:1-125,A:161-217) Adenylate kinase {Bacillus
globisporus [TaxId: 1459]}
Length = 182
Score = 29.9 bits (66), Expect = 0.38
Identities = 6/43 (13%), Positives = 16/43 (37%)
Query: 72 IVVEGPIASGKTEFCKKLADELDMIALPPANMDMFYKRGDFDW 114
IV+ G +GK ++ ++ + +M + +
Sbjct: 3 IVLMGLPGAGKGTQADRIVEKYGTPHISTGDMFRAAIQEGTEL 45
>d2cdna1 c.37.1.1 (A:1-181) Adenylate kinase {Mycobacterium
tuberculosis [TaxId: 1773]}
Length = 181
Score = 29.5 bits (65), Expect = 0.45
Identities = 15/55 (27%), Positives = 25/55 (45%), Gaps = 5/55 (9%)
Query: 72 IVVEGPIASGKTEFCKKLADELDMIALPP-----ANMDMFYKRGDFDWRSLDAEW 121
+++ GP +GK KLA++L + + N++ K G R LDA
Sbjct: 3 VLLLGPPGAGKGTQAVKLAEKLGIPQISTGELFRRNIEEGTKLGVEAKRYLDAGD 57
>d1viaa_ c.37.1.2 (A:) Shikimate kinase (AroK) {Campylobacter jejuni
[TaxId: 197]}
Length = 161
Score = 29.5 bits (65), Expect = 0.48
Identities = 15/86 (17%), Positives = 30/86 (34%), Gaps = 2/86 (2%)
Query: 70 KIIVVEGPIASGKTEFCKKLADELDM--IALPPANMDMFYKRGDFDWRSLDAEWSNENLK 127
K IV G + SGK+ + LA +LD+ + F ++ + + E +
Sbjct: 1 KNIVFIGFMGSGKSTLARALAKDLDLVFLDSDFLIEQKFNQKVSEIFEQKRENFFREQEQ 60
Query: 128 SYDEKTFCKDPKHFHTIAFQIRMLQL 153
+ + T + + L
Sbjct: 61 KMADFFSSCEKACIATGGGFVNVSNL 86
>d1deka_ c.37.1.1 (A:) Deoxynucleoside monophosphate kinase
{Bacteriophage T4 [TaxId: 10665]}
Length = 241
Score = 29.5 bits (65), Expect = 0.52
Identities = 6/24 (25%), Positives = 9/24 (37%)
Query: 70 KIIVVEGPIASGKTEFCKKLADEL 93
K+I + G SGK +
Sbjct: 2 KLIFLSGVKRSGKDTTADFIMSNY 25
>d1lvga_ c.37.1.1 (A:) Guanylate kinase {Mouse (Mus musculus)
[TaxId: 10090]}
Length = 190
Score = 29.1 bits (64), Expect = 0.57
Identities = 9/25 (36%), Positives = 14/25 (56%)
Query: 70 KIIVVEGPIASGKTEFCKKLADELD 94
+ +V+ GP +GK+ KKL E
Sbjct: 1 RPVVLSGPSGAGKSTLLKKLFQEHS 25
>d1ukza_ c.37.1.1 (A:) Uridylate kinase {Baker's yeast
(Saccharomyces cerevisiae) [TaxId: 4932]}
Length = 196
Score = 29.2 bits (64), Expect = 0.61
Identities = 8/27 (29%), Positives = 13/27 (48%)
Query: 70 KIIVVEGPIASGKTEFCKKLADELDMI 96
+I V G +GK C+KL + +
Sbjct: 9 SVIFVLGGPGAGKGTQCEKLVKDYSFV 35
>d1rkba_ c.37.1.1 (A:) Adenylate kinase {Human (Homo sapiens),
isoenzyme 6 [TaxId: 9606]}
Length = 173
Score = 29.1 bits (64), Expect = 0.62
Identities = 8/24 (33%), Positives = 13/24 (54%)
Query: 72 IVVEGPIASGKTEFCKKLADELDM 95
I++ G GKT K+LA + +
Sbjct: 7 ILLTGTPGVGKTTLGKELASKSGL 30
>d1uf9a_ c.37.1.1 (A:) Dephospho-CoA kinase {Thermus thermophilus
[TaxId: 274]}
Length = 191
Score = 29.1 bits (64), Expect = 0.75
Identities = 19/151 (12%), Positives = 39/151 (25%), Gaps = 9/151 (5%)
Query: 67 QNSKIIVVEGPIASGKTEFCKKL---------ADELDMIALPPANMDMFYKRGDFDWRSL 117
++ II + G I SGK+ L D L A ++ +
Sbjct: 1 KHPIIIGITGNIGSGKSTVAALLRSWGYPVLDLDALAARARENKEEELKRLFPEAVVGGR 60
Query: 118 DAEWSNENLKSYDEKTFCKDPKHFHTIAFQIRMLQLRFSVYVDALAHMLSTGQGAIVQRC 177
+ L D + H ++ M +L + + R
Sbjct: 61 LDRRALARLVFSDPERLKALEAVVHPEVRRLLMEELSRLEAPLVFLEIPLLFEKGWEGRL 120
Query: 178 PFSDFIFIEAMDKCGYITKRHKDIYYEITRF 208
+ + ++ + R E+
Sbjct: 121 HGTLLVAAPLEERVRRVMARSGLSREEVLAR 151
>d1j8yf2 c.37.1.10 (F:87-297) GTPase domain of the signal sequence
recognition protein Ffh {Archaeon Acidianus ambivalens
[TaxId: 2283]}
Length = 211
Score = 28.6 bits (63), Expect = 1.2
Identities = 9/87 (10%), Positives = 21/87 (24%), Gaps = 1/87 (1%)
Query: 71 IIVVEGPIASGKTEFCKKLADELDMIALPPANMDMFYKR-GDFDWRSLDAEWSNENLKSY 129
+I++ G +GK KLA + R + + +
Sbjct: 14 VIMLVGVQGTGKATTAGKLAYFYKKKGFKVGLVGADVYRPAALEQLQQLGQQIGVPVYGE 73
Query: 130 DEKTFCKDPKHFHTIAFQIRMLQLRFS 156
+ F +++
Sbjct: 74 PGEKDVVGIAKRGVEKFLSEKMEIIIV 100
>d1au1a_ a.26.1.3 (A:) Interferon-beta {Human (Homo sapiens)
[TaxId: 9606]}
Length = 166
Score = 27.8 bits (62), Expect = 1.4
Identities = 3/24 (12%), Positives = 8/24 (33%)
Query: 39 RRPPPYPYETRDFKFPWTLMEDTE 62
R + +F P + + +
Sbjct: 26 GRLEYCLKDRMNFDIPEEIKQLQQ 49
>d1kgda_ c.37.1.1 (A:) Guanylate kinase-like domain of Cask {Human
(Homo sapiens) [TaxId: 9606]}
Length = 178
Score = 27.9 bits (61), Expect = 1.7
Identities = 5/26 (19%), Positives = 9/26 (34%)
Query: 69 SKIIVVEGPIASGKTEFCKKLADELD 94
K +V+ G G+ L +
Sbjct: 3 RKTLVLLGAHGVGRRHIKNTLITKHP 28
>d1ls1a2 c.37.1.10 (A:89-295) GTPase domain of the signal sequence
recognition protein Ffh {Thermus aquaticus [TaxId:
271]}
Length = 207
Score = 27.8 bits (61), Expect = 1.8
Identities = 8/24 (33%), Positives = 12/24 (50%)
Query: 67 QNSKIIVVEGPIASGKTEFCKKLA 90
++ + + G SGKT KLA
Sbjct: 8 KDRNLWFLVGLQGSGKTTTAAKLA 31
>d1okkd2 c.37.1.10 (D:97-303) GTPase domain of the signal
recognition particle receptor FtsY {Thermus aquaticus
[TaxId: 271]}
Length = 207
Score = 27.8 bits (61), Expect = 1.9
Identities = 7/21 (33%), Positives = 11/21 (52%)
Query: 70 KIIVVEGPIASGKTEFCKKLA 90
++++V G GKT KL
Sbjct: 7 RVVLVVGVNGVGKTTTIAKLG 27
>d1g41a_ c.37.1.20 (A:) HslU {Haemophilus influenzae [TaxId: 727]}
Length = 443
Score = 28.2 bits (62), Expect = 2.2
Identities = 13/69 (18%), Positives = 24/69 (34%), Gaps = 12/69 (17%)
Query: 72 IVVEGPIASGKTEFCKKLADELDMIALPPANMDMF------YKRGDFD---WRSLDAEWS 122
I++ GP GKTE ++LA + P ++ Y + D D+
Sbjct: 52 ILMIGPTGVGKTEIARRLAKLAN---APFIKVEATKFTEVGYVGKEVDSIIRDLTDSAMK 108
Query: 123 NENLKSYDE 131
+ +
Sbjct: 109 LVRQQEIAK 117
>d1a5ta2 c.37.1.20 (A:1-207) delta prime subunit of DNA polymerase
III, N-domain {Escherichia coli [TaxId: 562]}
Length = 207
Score = 27.8 bits (60), Expect = 2.2
Identities = 12/151 (7%), Positives = 33/151 (21%), Gaps = 1/151 (0%)
Query: 72 IVVEGPIASGKTEFCKKLADELDMIALPPANMDMFYKRGDFDWRSLDAEWSNENLKSYDE 131
++++ G L+ L + ++ +
Sbjct: 27 LLIQALPGMGDDALIYALSRYLLCQQPQGHKSCGHCRGCQLMQAGTHPDYYTLAPEKGKN 86
Query: 132 KTFCKDPKHFHTIAFQIRMLQLRFSVYVDALAHMLSTGQGAIVQRCPFSDFIFIEAMDKC 191
+ + L V+V A + A+++
Sbjct: 87 TLGVDAVREVTEKLNEHARLGGAKVVWVTDAALLTDAAANALLKTL-EEPPAETWFFLAT 145
Query: 192 GYITKRHKDIYYEITRFTLPPLFKPHLVIYL 222
+ + L P + + V +L
Sbjct: 146 REPERLLATLRSRCRLHYLAPPPEQYAVTWL 176
>d1kaga_ c.37.1.2 (A:) Shikimate kinase (AroK) {Escherichia coli
[TaxId: 562]}
Length = 169
Score = 27.4 bits (59), Expect = 2.2
Identities = 21/156 (13%), Positives = 47/156 (30%), Gaps = 12/156 (7%)
Query: 70 KIIVVEGPIASGKTEFCKKLADELDMIALPPANMDMFYKRGDFDWRSLDAEWSNENLKSY 129
+ I + GP+ +GK+ ++LA +L+M + D ++ + E
Sbjct: 3 RNIFLVGPMGAGKSTIGRQLAQQLNM---EFYDSDQEIEKRTGADVGWVFDLEGEEGFRD 59
Query: 130 DEKTFCKDPKHFHTIAFQIRMLQLRFSVYVDALAHMLSTGQGAIVQRCPFSDFIFIEAMD 189
E+ + I ++ + L+ + + + +
Sbjct: 60 REEKVINELTEKQGIVLATGGGSVKSRETRNRLSAR---------GVVVYLETTIEKQLA 110
Query: 190 KCGYITKRHKDIYYEITRFTLPPLFKPHLVIYLDIP 225
+ KR R L L +Y +I
Sbjct: 111 RTQRDKKRPLLHVETPPREVLEALANERNPLYEEIA 146
>d1c9ka_ c.37.1.11 (A:) Adenosylcobinamide kinase/adenosylcobinamide
phosphate guanylyltransferase CobU {Salmonella
typhimurium [TaxId: 90371]}
Length = 180
Score = 27.3 bits (60), Expect = 2.2
Identities = 14/75 (18%), Positives = 26/75 (34%), Gaps = 19/75 (25%)
Query: 71 IIVVEGPIASGKTEFCKKLA-DELDMIALPPANMDMFYKRGDFDWRSLDAEWSNENLKSY 129
+I+V G SGK+ + L D ++ + + + LD E +
Sbjct: 1 MILVTGGARSGKSRHAEALIGDAPQVLYIATS-------------QILDDEM-----AAR 42
Query: 130 DEKTFCKDPKHFHTI 144
+ P H+ T
Sbjct: 43 IQHHKDGRPAHWRTA 57
>d1cr2a_ c.37.1.11 (A:) Gene 4 protein (g4p, DNA primase), helicase
domain {Bacteriophage T7 [TaxId: 10760]}
Length = 277
Score = 27.7 bits (60), Expect = 2.5
Identities = 14/119 (11%), Positives = 29/119 (24%)
Query: 67 QNSKIIVVEGPIASGKTEFCKKLADELDMIALPPANMDMFYKRGDFDWRSLDAEWSNENL 126
+ ++I+V GK+ F ++ A + + M + + L + L
Sbjct: 33 RGGEVIMVTSGSGMGKSTFVRQQALQWGTAMGKKVGLAMLEESVEETAEDLIGLHNRVRL 92
Query: 127 KSYDEKTFCKDPKHFHTIAFQIRMLQLRFSVYVDALAHMLSTGQGAIVQRCPFSDFIFI 185
+ D F F +Y + I
Sbjct: 93 RQSDSLKREIIENGKFDQWFDELFGNDTFHLYDSFAEAETDRLLAKLAYMRSGLGCDVI 151
>d1vhta_ c.37.1.1 (A:) Dephospho-CoA kinase {Escherichia coli
[TaxId: 562]}
Length = 208
Score = 27.1 bits (59), Expect = 3.0
Identities = 8/21 (38%), Positives = 11/21 (52%)
Query: 71 IIVVEGPIASGKTEFCKKLAD 91
I+ + G I SGK+ AD
Sbjct: 5 IVALTGGIGSGKSTVANAFAD 25
>d2fnaa2 c.37.1.20 (A:1-283) Archaeal ATPase SSO1545 {Sulfolobus
solfataricus [TaxId: 2287]}
Length = 283
Score = 27.4 bits (59), Expect = 3.1
Identities = 24/222 (10%), Positives = 62/222 (27%), Gaps = 13/222 (5%)
Query: 66 NQNSKIIVVEGPIASGKTEFCKKLADELDMIALPPANMDMFYKRGDFDWRSLDAEWSNEN 125
+ I +V G +GK+ K +EL+ R + + +
Sbjct: 26 GLRAPITLVLGLRRTGKSSIIKIGINELN------LPYIYLDLRKFEERNYISYKDFLLE 79
Query: 126 LKSYDEKTFCKDPKHFHTIAFQIRMLQLRFSVYVDALAHMLSTGQGAIVQRCPFSDFIFI 185
L+ K + P + ++ + + + + + S I
Sbjct: 80 LQKEINKLVKRLPSLLKALKNIQGIVIMGNEIKFNWNRKDRLSFANLLESFEQASKDNVI 139
Query: 186 EAMDKCGYITKRHKDIYYEITRFTLPPLFKPHLVIYLDIPVSKVKENVKKRNNPWEVNSP 245
+D+ + K + L + ++ + + + ++ + +
Sbjct: 140 IVLDEAQELVKLRGVNLLPALAYAYDNLKRIKFIMSGS-EMGLLYDYLRVEDPESPLFGR 198
Query: 246 IFNDKYLHEIEDLYKNNYLPQ------ISDSSELLVYDWSDG 281
F+ L +L + I +VY+ G
Sbjct: 199 AFSTVELKPFSREEAIEFLRRGFQEADIDFKDYEVVYEKIGG 240
>d1s96a_ c.37.1.1 (A:) Guanylate kinase {Escherichia coli [TaxId:
562]}
Length = 205
Score = 27.1 bits (59), Expect = 3.2
Identities = 5/26 (19%), Positives = 11/26 (42%)
Query: 70 KIIVVEGPIASGKTEFCKKLADELDM 95
+ +V P +GK+ + L +
Sbjct: 3 TLYIVSAPSGAGKSSLIQALLKTQPL 28
>d1svma_ c.37.1.20 (A:) Papillomavirus large T antigen helicase
domain {Simian virus 40 [TaxId: 10633]}
Length = 362
Score = 27.3 bits (60), Expect = 3.3
Identities = 8/26 (30%), Positives = 12/26 (46%)
Query: 70 KIIVVEGPIASGKTEFCKKLADELDM 95
+ + +GPI SGKT L +
Sbjct: 155 RYWLFKGPIDSGKTTLAAALLELCGG 180
>d1xjca_ c.37.1.10 (A:) Molybdopterin-guanine dinucleotide
biosynthesis protein MobB {Bacillus stearothermophilus
[TaxId: 1422]}
Length = 165
Score = 26.3 bits (57), Expect = 4.9
Identities = 11/83 (13%), Positives = 19/83 (22%), Gaps = 1/83 (1%)
Query: 70 KIIVVEGPIASGKTEFCKKLADELDMIALPPANMDMFYKRGDFDWRSLDAEWSNENLKSY 129
+ V G SGKT +K + G+ +E +
Sbjct: 2 NVWQVVGYKHSGKTTLMEKWVAAAVREGWRVGTVKHHGHGGEPARPEGVDSVRHERAGA- 60
Query: 130 DEKTFCKDPKHFHTIAFQIRMLQ 152
D + + L
Sbjct: 61 VATAVEGDGLLQLHLRRPLWRLD 83
>d1bifa1 c.37.1.7 (A:37-249)
6-phosphofructo-2-kinase/fructose-2,6-bisphosphatase,
kinase domain {Rat (Rattus norvegicus) [TaxId: 10116]}
Length = 213
Score = 26.5 bits (57), Expect = 5.5
Identities = 16/72 (22%), Positives = 28/72 (38%), Gaps = 2/72 (2%)
Query: 71 IIVVEGPIASGKTEFCKKLADELDMIALPP--ANMDMFYKRGDFDWRSLDAEWSNENLKS 128
+IV+ G A GKT KKL L+ I +P N+ + + ++S + +
Sbjct: 4 LIVMVGLPARGKTYISKKLTRYLNFIGVPTREFNVGQYRRDMVKTYKSFEFFLPDNEEGL 63
Query: 129 YDEKTFCKDPKH 140
K +
Sbjct: 64 KIRKQCALAALN 75
>d1htwa_ c.37.1.18 (A:) Hypothetical protein HI0065 {Haemophilus
influenzae [TaxId: 727]}
Length = 158
Score = 26.2 bits (57), Expect = 5.6
Identities = 9/67 (13%), Positives = 21/67 (31%), Gaps = 9/67 (13%)
Query: 67 QNSKIIVVEGPIASGKTEFCK---KLADELDMIALPPANMDMFYKRGDFD------WRSL 117
+ + ++ + G + +GKT + + + P + Y +R
Sbjct: 31 EKAIMVYLNGDLGAGKTTLTRGMLQGIGHQGNVKSPTYTLVEEYNIAGKMIYHFDLYRLA 90
Query: 118 DAEWSNE 124
D E
Sbjct: 91 DPEELEF 97
>d2iyva1 c.37.1.2 (A:2-166) Shikimate kinase (AroK) {Mycobacterium
tuberculosis [TaxId: 1773]}
Length = 165
Score = 26.1 bits (56), Expect = 6.1
Identities = 8/24 (33%), Positives = 13/24 (54%)
Query: 72 IVVEGPIASGKTEFCKKLADELDM 95
V+ G SGK+ ++LA L +
Sbjct: 4 AVLVGLPGSGKSTIGRRLAKALGV 27
>d2qy9a2 c.37.1.10 (A:285-495) GTPase domain of the signal
recognition particle receptor FtsY {Escherichia coli
[TaxId: 562]}
Length = 211
Score = 26.2 bits (57), Expect = 6.6
Identities = 8/20 (40%), Positives = 11/20 (55%)
Query: 71 IIVVEGPIASGKTEFCKKLA 90
+I++ G GKT KLA
Sbjct: 11 VILMVGVNGVGKTTTIGKLA 30
>d1m8pa3 c.37.1.15 (A:391-573) ATP sulfurylase C-terminal domain
{Fungus (Penicillium chrysogenum) [TaxId: 5076]}
Length = 183
Score = 25.8 bits (55), Expect = 8.5
Identities = 15/155 (9%), Positives = 33/155 (21%), Gaps = 1/155 (0%)
Query: 66 NQNSKIIVVEGPIASGKTEFCKKLADELDMIALPPANMDMFYKRGDFDWRSLDAEWSNEN 125
I + G + SGK + L L+ ++ + L + +
Sbjct: 3 ATQGFTIFLTGYMNSGKDAIARALQVTLNQQGGRSVSLLLGDTVRHELSSELGFTREDRH 62
Query: 126 LKSYDEKTFCKDPKHFHTIAFQIRMLQLRFSVYVDALAHMLSTGQGAIVQRCPFSDFIFI 185
+ + S A + + P
Sbjct: 63 TNIQRIAFVATELTRAGAAVIAAPIAPYEESRKFARDAVSQAGSFFLVHVATPLEHCEQS 122
Query: 186 EAMDKCGYITKRHKDIYYEITRFTLPPLFKPHLVI 220
+ + + + P K LV+
Sbjct: 123 DKRGIYAAARRGEIKGFTGVDDPYETPE-KADLVV 156
>d1yksa1 c.37.1.14 (A:185-324) YFV helicase domain {Yellow fever
virus [TaxId: 11089]}
Length = 140
Score = 25.4 bits (54), Expect = 9.0
Identities = 8/90 (8%), Positives = 23/90 (25%), Gaps = 1/90 (1%)
Query: 67 QNSKIIVVEGPIASGKTE-FCKKLADELDMIALPPANMDMFYKRGDFDWRSLDAEWSNEN 125
+ V++ +GKT F ++ E L + + +
Sbjct: 5 KKGMTTVLDFHPGAGKTRRFLPQILAECARRRLRTLVLAPTRVVLSEMKEAFHGLDVKFH 64
Query: 126 LKSYDEKTFCKDPKHFHTIAFQIRMLQLRF 155
+++ ++ A +
Sbjct: 65 TQAFSAHGSGREVIDAMCHATLTYRMLEPT 94
Database: scop70_1_75
Posted date: Mar 27, 2010 6:21 PM
Number of letters in database: 2,407,596
Number of sequences in database: 13,730
Lambda K H
0.320 0.138 0.436
Gapped
Lambda K H
0.267 0.0449 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 13730
Number of Hits to DB: 1,674,223
Number of extensions: 83965
Number of successful extensions: 351
Number of sequences better than 10.0: 1
Number of HSP's gapped: 343
Number of HSP's successfully gapped: 94
Length of query: 395
Length of database: 2,407,596
Length adjustment: 87
Effective length of query: 308
Effective length of database: 1,213,086
Effective search space: 373630488
Effective search space used: 373630488
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 54 (25.3 bits)