BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy6810
(168 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|110671478|gb|ABG81990.1| putative ATP synthase-like protein [Diaphorina citri]
Length = 249
Score = 223 bits (567), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 111/111 (100%), Positives = 111/111 (100%)
Query: 58 NDKLASLKGAIENELWNQERSKAQAVLYEAKRENIQMQLEAVFRERALFAYQQVKNRLEY 117
NDKLASLKGAIENELWNQERSKAQAVLYEAKRENIQMQLEAVFRERALFAYQQVKNRLEY
Sbjct: 139 NDKLASLKGAIENELWNQERSKAQAVLYEAKRENIQMQLEAVFRERALFAYQQVKNRLEY 198
Query: 118 QAALESIQRRISQKHMVSWVVSHVLKSITPDQDKQSIKKCISDLKALAARA 168
QAALESIQRRISQKHMVSWVVSHVLKSITPDQDKQSIKKCISDLKALAARA
Sbjct: 199 QAALESIQRRISQKHMVSWVVSHVLKSITPDQDKQSIKKCISDLKALAARA 249
>gi|170039307|ref|XP_001847481.1| ATP synthase B chain, mitochondrial [Culex quinquefasciatus]
gi|167862882|gb|EDS26265.1| ATP synthase B chain, mitochondrial [Culex quinquefasciatus]
Length = 238
Score = 132 bits (331), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 61/110 (55%), Positives = 88/110 (80%)
Query: 59 DKLASLKGAIENELWNQERSKAQAVLYEAKRENIQMQLEAVFRERALFAYQQVKNRLEYQ 118
D +A L AIE+E Q R++ Q +L +AK+EN+ +QLEA +RERA+ AY++VK RL+YQ
Sbjct: 128 DNIAQLNQAIEDEKKEQWRAEGQTLLMQAKKENVALQLEAAYRERAMTAYREVKKRLDYQ 187
Query: 119 AALESIQRRISQKHMVSWVVSHVLKSITPDQDKQSIKKCISDLKALAARA 168
+++ RRISQKHMV W+VS+V+KSITPDQ+K+++ KCI+DL A+AAR+
Sbjct: 188 VERQNVDRRISQKHMVDWIVSNVVKSITPDQEKETLNKCIADLGAIAARS 237
>gi|215259753|gb|ACJ64368.1| mitochondrial ATP synthase B chain [Culex tarsalis]
Length = 162
Score = 131 bits (329), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 61/109 (55%), Positives = 87/109 (79%)
Query: 59 DKLASLKGAIENELWNQERSKAQAVLYEAKRENIQMQLEAVFRERALFAYQQVKNRLEYQ 118
D +A L AIE+E Q R++ Q +L +AK+EN+ +QLEA +RERA+ AY++VK RL+YQ
Sbjct: 52 DNIAQLNQAIEDEKKEQWRAEGQTLLMQAKKENVALQLEAAYRERAMTAYREVKKRLDYQ 111
Query: 119 AALESIQRRISQKHMVSWVVSHVLKSITPDQDKQSIKKCISDLKALAAR 167
+++ RRISQKHMV W+VS+V+KSITPDQ+K+++ KCI+DL A+AAR
Sbjct: 112 VERQNVDRRISQKHMVDWIVSNVVKSITPDQEKETLNKCIADLGAIAAR 160
>gi|215259855|gb|ACJ64419.1| mitochondrial ATP synthase B chain [Culex tarsalis]
Length = 139
Score = 129 bits (325), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 60/109 (55%), Positives = 87/109 (79%)
Query: 59 DKLASLKGAIENELWNQERSKAQAVLYEAKRENIQMQLEAVFRERALFAYQQVKNRLEYQ 118
D +A L AIE+E Q R++ Q +L +AK+EN+ +QLEA +RERA+ AY++V+ RL+YQ
Sbjct: 29 DNIAQLNQAIEDEKKEQWRAEGQTLLMQAKKENVALQLEAAYRERAMTAYREVEKRLDYQ 88
Query: 119 AALESIQRRISQKHMVSWVVSHVLKSITPDQDKQSIKKCISDLKALAAR 167
+++ RRISQKHMV W+VS+V+KSITPDQ+K+++ KCI+DL A+AAR
Sbjct: 89 VERQNVDRRISQKHMVDWIVSNVVKSITPDQEKETLNKCIADLGAIAAR 137
>gi|158302485|ref|XP_322024.4| AGAP001138-PA [Anopheles gambiae str. PEST]
gi|157012975|gb|EAA01034.4| AGAP001138-PA [Anopheles gambiae str. PEST]
Length = 236
Score = 127 bits (319), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 60/110 (54%), Positives = 87/110 (79%)
Query: 59 DKLASLKGAIENELWNQERSKAQAVLYEAKRENIQMQLEAVFRERALFAYQQVKNRLEYQ 118
+ + L AIE+E Q R++ Q +L +AK+EN+ +QLEA +RERA+ AY++VK RL+YQ
Sbjct: 126 NNIQQLTQAIEDEKKEQWRAEGQTMLMQAKKENVALQLEAAYRERAMNAYREVKKRLDYQ 185
Query: 119 AALESIQRRISQKHMVSWVVSHVLKSITPDQDKQSIKKCISDLKALAARA 168
+++ RRISQKHMV W+VS+V+KSITPDQ+K+++ KCI+DL ALAAR+
Sbjct: 186 VERQNVDRRISQKHMVDWIVSNVVKSITPDQEKENLNKCIADLGALAARS 235
>gi|312373023|gb|EFR20854.1| hypothetical protein AND_18381 [Anopheles darlingi]
Length = 237
Score = 126 bits (316), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 59/105 (56%), Positives = 85/105 (80%)
Query: 64 LKGAIENELWNQERSKAQAVLYEAKRENIQMQLEAVFRERALFAYQQVKNRLEYQAALES 123
L AIE+E Q R++ Q +L +AK+EN+ +QLEA +RERA+ AY++VK RL+YQ ++
Sbjct: 132 LTQAIEDEKKEQWRAEGQTMLMQAKKENVALQLEAAYRERAMNAYREVKKRLDYQVERQN 191
Query: 124 IQRRISQKHMVSWVVSHVLKSITPDQDKQSIKKCISDLKALAARA 168
+ RRISQKHMV W+V++V+KSITPDQ+K+++ KCI+DL ALAAR+
Sbjct: 192 VDRRISQKHMVDWIVNNVVKSITPDQEKENLNKCIADLGALAARS 236
>gi|157110513|ref|XP_001651134.1| mitochondrial ATP synthase b chain [Aedes aegypti]
gi|108878666|gb|EAT42891.1| AAEL005610-PA [Aedes aegypti]
Length = 238
Score = 122 bits (305), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 56/110 (50%), Positives = 85/110 (77%)
Query: 59 DKLASLKGAIENELWNQERSKAQAVLYEAKRENIQMQLEAVFRERALFAYQQVKNRLEYQ 118
+ + L A+E+E Q R++ Q +L EAK+EN+ +QLEA +RERA+ Y++VK RL+YQ
Sbjct: 128 NNIQQLAQAMEDEKKEQWRAEGQTLLMEAKKENVALQLEAAYRERAMTVYREVKKRLDYQ 187
Query: 119 AALESIQRRISQKHMVSWVVSHVLKSITPDQDKQSIKKCISDLKALAARA 168
+++ RRISQKHMV W+V +V+KSITP+Q+K+++ +CI+DL A+AARA
Sbjct: 188 VERQNVDRRISQKHMVDWIVKNVVKSITPEQEKETLSRCIADLGAIAARA 237
>gi|289742953|gb|ADD20224.1| ATP synthase subunit b [Glossina morsitans morsitans]
Length = 236
Score = 121 bits (303), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 59/109 (54%), Positives = 81/109 (74%)
Query: 60 KLASLKGAIENELWNQERSKAQAVLYEAKRENIQMQLEAVFRERALFAYQQVKNRLEYQA 119
+L SLK +IE E Q R++ +L +AK+EN+ +QLEA FRER + Y +VK RL+YQ
Sbjct: 127 ELKSLKDSIEAEKKEQWRAEGSLMLMDAKKENVALQLEAAFRERVMNVYNEVKRRLDYQV 186
Query: 120 ALESIQRRISQKHMVSWVVSHVLKSITPDQDKQSIKKCISDLKALAARA 168
I+RR+SQKHMV+W+V++VL SITP Q+K ++ KCI+DL ALAARA
Sbjct: 187 ECRHIERRLSQKHMVNWIVNNVLSSITPQQEKDTLNKCIADLNALAARA 235
>gi|241680591|ref|XP_002412695.1| ATP synthase B chain, putative [Ixodes scapularis]
gi|215506497|gb|EEC15991.1| ATP synthase B chain, putative [Ixodes scapularis]
Length = 264
Score = 120 bits (302), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 60/120 (50%), Positives = 87/120 (72%), Gaps = 6/120 (5%)
Query: 49 SHRAGKIRTNDKLASLKGAIENELWNQERSKAQAVLYEAKRENIQMQLEAVFRERALFAY 108
S R G I L+ AI+NE +Q +++ Q +L+EAKREN+Q+QLEA FR+R + Y
Sbjct: 151 SFRQGNI------DGLQEAIKNEERSQWQAQGQHMLFEAKRENVQLQLEAEFRKRQMTVY 204
Query: 109 QQVKNRLEYQAALESIQRRISQKHMVSWVVSHVLKSITPDQDKQSIKKCISDLKALAARA 168
+VK RL+Y +++I RR+ QKHMV W+V++V+KSITP Q+K +++KCI+DLK LAA A
Sbjct: 205 NEVKRRLDYHLEVQNITRRMQQKHMVDWIVNNVVKSITPQQEKDTLQKCIADLKGLAATA 264
>gi|67083945|gb|AAY66907.1| putative ATP synthase-like protein [Ixodes scapularis]
Length = 264
Score = 120 bits (302), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 60/120 (50%), Positives = 87/120 (72%), Gaps = 6/120 (5%)
Query: 49 SHRAGKIRTNDKLASLKGAIENELWNQERSKAQAVLYEAKRENIQMQLEAVFRERALFAY 108
S R G I L+ AI+NE +Q +++ Q +L+EAKREN+Q+QLEA FR+R + Y
Sbjct: 151 SFRQGNI------DGLQEAIKNEERSQWQAQGQHMLFEAKRENVQLQLEAEFRKRQMTVY 204
Query: 109 QQVKNRLEYQAALESIQRRISQKHMVSWVVSHVLKSITPDQDKQSIKKCISDLKALAARA 168
+VK RL+Y +++I RR+ QKHMV W+V++V+KSITP Q+K +++KCI+DLK LAA A
Sbjct: 205 NEVKRRLDYHLEVQNITRRMQQKHMVDWIVNNVVKSITPQQEKDTLQKCIADLKGLAATA 264
>gi|442755337|gb|JAA69828.1| Putative mitochondrial f1f0-atp synthase subunit b/atp4 [Ixodes
ricinus]
Length = 264
Score = 120 bits (301), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 60/120 (50%), Positives = 87/120 (72%), Gaps = 6/120 (5%)
Query: 49 SHRAGKIRTNDKLASLKGAIENELWNQERSKAQAVLYEAKRENIQMQLEAVFRERALFAY 108
S R G I +L+ AI+NE +Q +++ Q +L+EAKREN+Q+QLEA FR R + Y
Sbjct: 151 SFRQGNI------DNLQEAIKNEERSQWQAQGQHMLFEAKRENVQLQLEAEFRRRQMTVY 204
Query: 109 QQVKNRLEYQAALESIQRRISQKHMVSWVVSHVLKSITPDQDKQSIKKCISDLKALAARA 168
+VK RL+Y +++I RR+ QKHMV W+V++V+KSITP Q+K +++KCI+DLK LAA A
Sbjct: 205 NEVKRRLDYHLEVQNITRRMQQKHMVDWIVNNVVKSITPQQEKDTLQKCIADLKGLAATA 264
>gi|114052262|ref|NP_001040232.1| ATP synthase [Bombyx mori]
gi|87248461|gb|ABD36283.1| ATP synthase [Bombyx mori]
Length = 243
Score = 119 bits (299), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 54/108 (50%), Positives = 83/108 (76%)
Query: 58 NDKLASLKGAIENELWNQERSKAQAVLYEAKRENIQMQLEAVFRERALFAYQQVKNRLEY 117
N + +L+ AIE E Q R++ Q +L +AK+EN+ +QLEA +RER ++AY +VK RL+Y
Sbjct: 134 NQTVKALEDAIEGEKTEQWRAQGQELLIQAKKENVLLQLEAAYRERLMYAYTEVKRRLDY 193
Query: 118 QAALESIQRRISQKHMVSWVVSHVLKSITPDQDKQSIKKCISDLKALA 165
Q +++RR++QKHMV W+VS+V K+ITPDQ+KQ++ +CI+DL +LA
Sbjct: 194 QLEKSNVERRLAQKHMVDWIVSNVTKAITPDQEKQALDRCIADLASLA 241
>gi|346468455|gb|AEO34072.1| hypothetical protein [Amblyomma maculatum]
Length = 270
Score = 117 bits (293), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 54/110 (49%), Positives = 83/110 (75%)
Query: 59 DKLASLKGAIENELWNQERSKAQAVLYEAKRENIQMQLEAVFRERALFAYQQVKNRLEYQ 118
+ + + K +I+ E Q +++ Q+ L++AKREN+ +QLEA FR+R + Y +VK RL+Y
Sbjct: 161 NGIETFKDSIKQEEVAQWQAQGQSHLFQAKRENVALQLEAEFRKRQMTVYNEVKRRLDYH 220
Query: 119 AALESIQRRISQKHMVSWVVSHVLKSITPDQDKQSIKKCISDLKALAARA 168
++++ RR+ QKHMV W+V++VLKSITP Q+K S++KCI+DLK LAARA
Sbjct: 221 LEVQNVTRRLQQKHMVDWIVNNVLKSITPQQEKDSLQKCITDLKGLAARA 270
>gi|427787385|gb|JAA59144.1| Putative atp synthase subunit b [Rhipicephalus pulchellus]
Length = 266
Score = 117 bits (292), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 55/108 (50%), Positives = 81/108 (75%)
Query: 61 LASLKGAIENELWNQERSKAQAVLYEAKRENIQMQLEAVFRERALFAYQQVKNRLEYQAA 120
+ + K AI+NE Q ++ Q L+EAKREN+ +QLEA FR+R + Y++VK RL+Y
Sbjct: 159 IEAYKDAIKNEEHAQWEAQGQHYLFEAKRENVALQLEAEFRKRQMSVYEEVKKRLDYHLE 218
Query: 121 LESIQRRISQKHMVSWVVSHVLKSITPDQDKQSIKKCISDLKALAARA 168
++++ RR+ QKHMV W+V++VLK ITP Q+K S+++CI DLKALAA+A
Sbjct: 219 VQNVTRRLQQKHMVDWIVNNVLKGITPQQEKDSLQQCIVDLKALAAKA 266
>gi|52630941|gb|AAU84934.1| putative ATP synthase-like protein [Toxoptera citricida]
Length = 273
Score = 116 bits (290), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 58/112 (51%), Positives = 86/112 (76%), Gaps = 6/112 (5%)
Query: 60 KLASLKGAIEN---ELWNQERSKAQAVLYEAKRENIQMQLEAVFRERALFAYQQVKNRLE 116
++ LK IE+ E+W R++AQ + +AKREN+ +QLEA++RERAL AY QVK RL+
Sbjct: 165 EIDGLKETIEHQKTEIW---RTEAQKHVIQAKRENVALQLEAIYRERALQAYNQVKRRLD 221
Query: 117 YQAALESIQRRISQKHMVSWVVSHVLKSITPDQDKQSIKKCISDLKALAARA 168
YQ L ++ R + Q+HMV+W++ +VLKS+T +Q+KQS KKC++DL+ALAA+A
Sbjct: 222 YQLDLANLTRTVQQRHMVNWIIENVLKSLTNEQEKQSFKKCMADLQALAAKA 273
>gi|389611105|dbj|BAM19163.1| ATP synthase [Papilio polytes]
Length = 245
Score = 116 bits (290), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 70/186 (37%), Positives = 106/186 (56%), Gaps = 23/186 (12%)
Query: 5 FVMQHGKFDTIGPVSLGEPIWVSDMAKCAQVMNRSV-----VLTWVMYQSHRAG-KIRT- 57
F H K GP + G + +K VM + V Y + + G KI T
Sbjct: 59 FQFFHSKTGVTGPYTFGVGLATYLFSKEIYVMEHEYYTGLSIFLMVYYATTKFGPKIATW 118
Query: 58 ------------ND----KLASLKGAIENELWNQERSKAQAVLYEAKRENIQMQLEAVFR 101
N+ + L+ AIE+E +Q R++ Q +L +AK+EN+ +QLEA +R
Sbjct: 119 LDKEVDAVESGWNEGRVQNIKDLEQAIEDEKTSQWRAQGQELLIQAKKENVLLQLEAAYR 178
Query: 102 ERALFAYQQVKNRLEYQAALESIQRRISQKHMVSWVVSHVLKSITPDQDKQSIKKCISDL 161
ER + AY +VK RL+YQ +++RR++QK MV WVV++V K+ITPDQ+KQ++ +CI+DL
Sbjct: 179 ERMMNAYTEVKRRLDYQLEKSNVERRLAQKAMVDWVVTNVTKAITPDQEKQALDRCIADL 238
Query: 162 KALAAR 167
ALAA+
Sbjct: 239 SALAAK 244
>gi|240849631|ref|NP_001155377.1| ATP synthase subunit b, mitochondrial-like [Acyrthosiphon pisum]
gi|239789894|dbj|BAH71543.1| ACYPI000258 [Acyrthosiphon pisum]
Length = 273
Score = 115 bits (289), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 68/158 (43%), Positives = 100/158 (63%), Gaps = 15/158 (9%)
Query: 14 TIGPVSLGEPIWVSDMAKCAQVMNRSVVLTWVMYQSHRAGKIRTNDKLASLKGAIEN--- 70
TIG +G W A A +++ + + R G+I L +IEN
Sbjct: 128 TIGLFYVG---WKKFGASLAGFLDKEIDEYEASCNASRKGEID------GLTESIENQKK 178
Query: 71 ELWNQERSKAQAVLYEAKRENIQMQLEAVFRERALFAYQQVKNRLEYQAALESIQRRISQ 130
E+W R++AQ + +AKREN+ +QLEA++RERAL AY QVK RL+YQ L ++ R + Q
Sbjct: 179 EVW---RTEAQKHVIQAKRENVAIQLEAIYRERALQAYNQVKRRLDYQLDLANLTRTVQQ 235
Query: 131 KHMVSWVVSHVLKSITPDQDKQSIKKCISDLKALAARA 168
+HMV+W++ +VLKS+T +Q+KQS KKC+ DL+ALAA+A
Sbjct: 236 RHMVNWIIENVLKSLTNEQEKQSFKKCMVDLQALAAKA 273
>gi|195440316|ref|XP_002067988.1| GK10957 [Drosophila willistoni]
gi|194164073|gb|EDW78974.1| GK10957 [Drosophila willistoni]
Length = 243
Score = 115 bits (288), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 57/108 (52%), Positives = 78/108 (72%)
Query: 60 KLASLKGAIENELWNQERSKAQAVLYEAKRENIQMQLEAVFRERALFAYQQVKNRLEYQA 119
+L L AIE E Q R+ +L +AK+ENI +QLEA FRERA+ Y +VK RL+YQ
Sbjct: 132 ELKVLADAIEAEKKEQWRADGALLLMDAKKENIALQLEAAFRERAMNVYTEVKRRLDYQV 191
Query: 120 ALESIQRRISQKHMVSWVVSHVLKSITPDQDKQSIKKCISDLKALAAR 167
++RR+SQKHMV+W+VS+VL SI+P Q+K+++ KCI+DL ALA R
Sbjct: 192 ECRHVERRLSQKHMVNWIVSNVLSSISPQQEKETLNKCIADLSALALR 239
>gi|195012528|ref|XP_001983688.1| GH15429 [Drosophila grimshawi]
gi|193897170|gb|EDV96036.1| GH15429 [Drosophila grimshawi]
Length = 246
Score = 115 bits (287), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 56/108 (51%), Positives = 77/108 (71%)
Query: 60 KLASLKGAIENELWNQERSKAQAVLYEAKRENIQMQLEAVFRERALFAYQQVKNRLEYQA 119
+L L AIE+E Q R+ +L EAK+ENI +QLEA FRERA+ Y +VK RL+YQ
Sbjct: 135 ELKVLADAIEDEKKEQWRADGALMLMEAKKENIALQLEAAFRERAMNVYSEVKRRLDYQV 194
Query: 120 ALESIQRRISQKHMVSWVVSHVLKSITPDQDKQSIKKCISDLKALAAR 167
++RR+SQKHM +W+V++VL SI+P Q+K+++ KCI DL ALA R
Sbjct: 195 ECRHVERRLSQKHMANWIVANVLSSISPQQEKETLNKCIGDLSALALR 242
>gi|389611846|dbj|BAM19483.1| ATP synthase [Papilio xuthus]
Length = 245
Score = 114 bits (285), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 71/186 (38%), Positives = 104/186 (55%), Gaps = 23/186 (12%)
Query: 5 FVMQHGKFDTIGPVSLGEPIWVSDMAKCAQVMNRSV-----VLTWVMYQSHRAG-KIRT- 57
F H K GP + G + +K VM + V Y + R G KI
Sbjct: 59 FQFFHSKTGVTGPYTFGVGLATYLFSKEIYVMEHEYYTGLSIFLMVYYATTRFGPKIAAW 118
Query: 58 NDK----------------LASLKGAIENELWNQERSKAQAVLYEAKRENIQMQLEAVFR 101
DK + L+ AIE+E Q R++ Q +L +AK+EN+ +QLEA +R
Sbjct: 119 LDKEVDAVENSWNEGRVQSIKDLEQAIEDEKTAQWRAQGQELLIQAKKENVLLQLEAAYR 178
Query: 102 ERALFAYQQVKNRLEYQAALESIQRRISQKHMVSWVVSHVLKSITPDQDKQSIKKCISDL 161
ER + AY +VK RL+YQ +++RR++QK MV WVV++V K+ITPDQ+KQ++ +CI+DL
Sbjct: 179 ERMMNAYTEVKRRLDYQLEKSNVERRLAQKAMVDWVVTNVTKAITPDQEKQALDRCIADL 238
Query: 162 KALAAR 167
ALAA+
Sbjct: 239 SALAAK 244
>gi|24661884|ref|NP_524011.1| ATP synthase, subunit b [Drosophila melanogaster]
gi|12644469|sp|Q94516.2|AT5F1_DROME RecName: Full=ATP synthase subunit b, mitochondrial; Short=ATPase
subunit b; AltName: Full=FO-ATP synthase subunit b;
Flags: Precursor
gi|7294882|gb|AAF50212.1| ATP synthase, subunit b [Drosophila melanogaster]
gi|41058102|gb|AAR99111.1| RE36486p [Drosophila melanogaster]
gi|220950888|gb|ACL87987.1| ATPsyn-b-PA [synthetic construct]
gi|220959542|gb|ACL92314.1| ATPsyn-b-PA [synthetic construct]
Length = 243
Score = 114 bits (285), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 56/108 (51%), Positives = 77/108 (71%)
Query: 60 KLASLKGAIENELWNQERSKAQAVLYEAKRENIQMQLEAVFRERALFAYQQVKNRLEYQA 119
+L L AIE E Q R+ +L EAK+ENI +QLEA FRERA+ Y +VK RL+YQ
Sbjct: 132 ELKVLSDAIEAEKKEQWRADGALLLMEAKKENIALQLEAAFRERAMNVYSEVKRRLDYQV 191
Query: 120 ALESIQRRISQKHMVSWVVSHVLKSITPDQDKQSIKKCISDLKALAAR 167
++RR+SQKHMV+W+ ++VL SI+P Q+K+++ KCI+DL ALA R
Sbjct: 192 ECRHVERRLSQKHMVNWITTNVLASISPQQEKETLNKCIADLSALALR 239
>gi|195326437|ref|XP_002029935.1| GM25183 [Drosophila sechellia]
gi|195589149|ref|XP_002084318.1| GD14214 [Drosophila simulans]
gi|194118878|gb|EDW40921.1| GM25183 [Drosophila sechellia]
gi|194196327|gb|EDX09903.1| GD14214 [Drosophila simulans]
Length = 243
Score = 114 bits (285), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 56/108 (51%), Positives = 77/108 (71%)
Query: 60 KLASLKGAIENELWNQERSKAQAVLYEAKRENIQMQLEAVFRERALFAYQQVKNRLEYQA 119
+L L AIE E Q R+ +L EAK+ENI +QLEA FRERA+ Y +VK RL+YQ
Sbjct: 132 ELKVLSDAIEAEKKEQWRADGALLLMEAKKENIALQLEAAFRERAMNVYSEVKRRLDYQV 191
Query: 120 ALESIQRRISQKHMVSWVVSHVLKSITPDQDKQSIKKCISDLKALAAR 167
++RR+SQKHMV+W+ ++VL SI+P Q+K+++ KCI+DL ALA R
Sbjct: 192 ECRHVERRLSQKHMVNWITTNVLASISPQQEKETLNKCIADLSALALR 239
>gi|28557657|gb|AAO45234.1| GM13038p [Drosophila melanogaster]
gi|220944688|gb|ACL84887.1| ATPsyn-b-PB [synthetic construct]
gi|220954562|gb|ACL89824.1| ATPsyn-b-PB [synthetic construct]
Length = 159
Score = 114 bits (284), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 56/108 (51%), Positives = 77/108 (71%)
Query: 60 KLASLKGAIENELWNQERSKAQAVLYEAKRENIQMQLEAVFRERALFAYQQVKNRLEYQA 119
+L L AIE E Q R+ +L EAK+ENI +QLEA FRERA+ Y +VK RL+YQ
Sbjct: 48 ELKVLSDAIEAEKKEQWRADGALLLMEAKKENIALQLEAAFRERAMNVYSEVKRRLDYQV 107
Query: 120 ALESIQRRISQKHMVSWVVSHVLKSITPDQDKQSIKKCISDLKALAAR 167
++RR+SQKHMV+W+ ++VL SI+P Q+K+++ KCI+DL ALA R
Sbjct: 108 ECRHVERRLSQKHMVNWITTNVLASISPQQEKETLNKCIADLSALALR 155
>gi|307180365|gb|EFN68391.1| ATP synthase subunit b, mitochondrial [Camponotus floridanus]
Length = 238
Score = 113 bits (283), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 54/109 (49%), Positives = 80/109 (73%)
Query: 60 KLASLKGAIENELWNQERSKAQAVLYEAKRENIQMQLEAVFRERALFAYQQVKNRLEYQA 119
++ + I +E Q Q ++ E K+ENI+MQLEA +RER YQ+VK RL+YQ
Sbjct: 130 QITDYENIIAHEKKEQYNLDGQKMIMEIKKENIKMQLEATYRERLAQVYQEVKKRLDYQV 189
Query: 120 ALESIQRRISQKHMVSWVVSHVLKSITPDQDKQSIKKCISDLKALAARA 168
L++++RRI+QKHMV W+V+ VLK+ITPDQ+K ++++CI DL+ALAA+A
Sbjct: 190 QLQNLERRIAQKHMVQWIVNGVLKAITPDQEKATLQQCIKDLEALAAKA 238
>gi|220028649|gb|ACL77780.1| ATP synthase b [Spodoptera exigua]
Length = 244
Score = 113 bits (283), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 53/109 (48%), Positives = 83/109 (76%)
Query: 59 DKLASLKGAIENELWNQERSKAQAVLYEAKRENIQMQLEAVFRERALFAYQQVKNRLEYQ 118
+ + +L+ A+E E Q R++ Q +L +AK+EN+ +QLEA +RER + AY +VK RL+YQ
Sbjct: 135 ESIKALEDAVEAEKKAQWRAQGQELLIQAKKENVLLQLEAAYRERPMNAYTEVKRRLDYQ 194
Query: 119 AALESIQRRISQKHMVSWVVSHVLKSITPDQDKQSIKKCISDLKALAAR 167
+++RR++Q+ MV W+VS+V K+ITPDQ+KQ++ +CI+DL ALAAR
Sbjct: 195 LEKSNLERRLAQRQMVDWIVSNVNKAITPDQEKQTLDRCIADLAALAAR 243
>gi|195490710|ref|XP_002093254.1| GE20875 [Drosophila yakuba]
gi|194179355|gb|EDW92966.1| GE20875 [Drosophila yakuba]
Length = 243
Score = 113 bits (282), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 55/108 (50%), Positives = 77/108 (71%)
Query: 60 KLASLKGAIENELWNQERSKAQAVLYEAKRENIQMQLEAVFRERALFAYQQVKNRLEYQA 119
+L L AIE E Q R+ +L +AK+ENI +QLEA FRERA+ Y +VK RL+YQ
Sbjct: 132 ELKVLSDAIEAEKKEQWRADGALLLMDAKKENIALQLEAAFRERAMNVYSEVKRRLDYQV 191
Query: 120 ALESIQRRISQKHMVSWVVSHVLKSITPDQDKQSIKKCISDLKALAAR 167
++RR+SQKHMV+W+ ++VL SI+P Q+K+++ KCI+DL ALA R
Sbjct: 192 ECRHVERRLSQKHMVNWITTNVLASISPQQEKETLNKCIADLSALALR 239
>gi|194868109|ref|XP_001972222.1| GG15409 [Drosophila erecta]
gi|190654005|gb|EDV51248.1| GG15409 [Drosophila erecta]
Length = 243
Score = 113 bits (282), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 55/108 (50%), Positives = 77/108 (71%)
Query: 60 KLASLKGAIENELWNQERSKAQAVLYEAKRENIQMQLEAVFRERALFAYQQVKNRLEYQA 119
+L L AIE E Q R+ +L +AK+ENI +QLEA FRERA+ Y +VK RL+YQ
Sbjct: 132 ELKVLSDAIEAEKKEQWRADGALLLMDAKKENIALQLEAAFRERAMNVYSEVKRRLDYQV 191
Query: 120 ALESIQRRISQKHMVSWVVSHVLKSITPDQDKQSIKKCISDLKALAAR 167
++RR+SQKHMV+W+ ++VL SI+P Q+K+++ KCI+DL ALA R
Sbjct: 192 ECRHVERRLSQKHMVNWITTNVLASISPQQEKETLNKCIADLSALALR 239
>gi|194747683|ref|XP_001956281.1| GF24674 [Drosophila ananassae]
gi|190623563|gb|EDV39087.1| GF24674 [Drosophila ananassae]
Length = 245
Score = 113 bits (282), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 55/108 (50%), Positives = 77/108 (71%)
Query: 60 KLASLKGAIENELWNQERSKAQAVLYEAKRENIQMQLEAVFRERALFAYQQVKNRLEYQA 119
+L L AIE E Q R+ +L EAK+ENI +QLEA FRERA+ Y +VK RL+YQ
Sbjct: 134 ELKVLSDAIEAEKKEQWRADGALLLMEAKKENIALQLEAAFRERAMNVYSEVKRRLDYQV 193
Query: 120 ALESIQRRISQKHMVSWVVSHVLKSITPDQDKQSIKKCISDLKALAAR 167
++RR++QKHMV+W+ ++VL SI+P Q+K+++ KCI+DL ALA R
Sbjct: 194 ECRHVERRLNQKHMVNWITTNVLASISPQQEKETLNKCIADLSALALR 241
>gi|195376575|ref|XP_002047072.1| GJ12126 [Drosophila virilis]
gi|194154230|gb|EDW69414.1| GJ12126 [Drosophila virilis]
Length = 246
Score = 113 bits (282), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 55/108 (50%), Positives = 77/108 (71%)
Query: 60 KLASLKGAIENELWNQERSKAQAVLYEAKRENIQMQLEAVFRERALFAYQQVKNRLEYQA 119
+L L AIE E Q R+ +L +AK+ENI +QLEA FRERA+ Y +VK RL+YQ
Sbjct: 134 ELKVLADAIEAEKKEQWRADGALLLMDAKKENIALQLEAAFRERAMNVYSEVKRRLDYQV 193
Query: 120 ALESIQRRISQKHMVSWVVSHVLKSITPDQDKQSIKKCISDLKALAAR 167
++RR+SQKHMV+W+V++VL SI+P Q+K+++ KCI DL AL+ R
Sbjct: 194 ECRHVERRLSQKHMVNWIVANVLSSISPQQEKETLNKCIGDLTALSLR 241
>gi|357629880|gb|EHJ78386.1| ATP synthase-like protein [Danaus plexippus]
Length = 240
Score = 112 bits (281), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 53/109 (48%), Positives = 80/109 (73%)
Query: 59 DKLASLKGAIENELWNQERSKAQAVLYEAKRENIQMQLEAVFRERALFAYQQVKNRLEYQ 118
+ + LK AIE+E Q R+ Q +L AK+EN+ +QLEA +RER + Y +VK RL+YQ
Sbjct: 132 ESINDLKKAIEDEKDAQWRANGQELLIAAKKENVLLQLEAAYRERMMMVYSEVKRRLDYQ 191
Query: 119 AALESIQRRISQKHMVSWVVSHVLKSITPDQDKQSIKKCISDLKALAAR 167
+++RRI+QK+MV W+V++V K+ITPDQ+KQ++ +CI+DL ALA +
Sbjct: 192 LEKTNLERRIAQKNMVDWIVANVTKAITPDQEKQAMDRCIADLAALAGK 240
>gi|91086023|ref|XP_973076.1| PREDICTED: similar to AGAP001138-PA [Tribolium castaneum]
gi|270011051|gb|EFA07499.1| hypothetical protein TcasGA2_TC009556 [Tribolium castaneum]
Length = 246
Score = 112 bits (280), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 59/112 (52%), Positives = 79/112 (70%), Gaps = 1/112 (0%)
Query: 56 RTNDKLASLKGAIENELWNQERSKAQAVLYEAKRENIQMQLEAVFRERALFAYQQVKNRL 115
R DK +L+ AIE+E NQ R + Q +L +AKREN+ +QLEA +RER L AY QVK RL
Sbjct: 135 RVQDK-ETLQNAIEDEKKNQWRMEGQTMLVQAKRENVALQLEAAYRERLLEAYTQVKKRL 193
Query: 116 EYQAALESIQRRISQKHMVSWVVSHVLKSITPDQDKQSIKKCISDLKALAAR 167
+YQ ++I+RRI+QK++V WVV V SITPDQ+KQ+I CI+ L L +
Sbjct: 194 DYQVEKQNIERRIAQKNLVDWVVRKVKASITPDQEKQNIDNCIATLGNLIPK 245
>gi|23820959|gb|AAN39695.1| ATP synthase-like protein [Choristoneura parallela]
Length = 245
Score = 112 bits (279), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 52/109 (47%), Positives = 81/109 (74%)
Query: 59 DKLASLKGAIENELWNQERSKAQAVLYEAKRENIQMQLEAVFRERALFAYQQVKNRLEYQ 118
+ + SL+ AI E +Q R++ Q +L +AKREN+ +QLEA + ER + Y +VK RL+YQ
Sbjct: 136 ETIKSLEDAIAEEKKSQWRAEGQELLVQAKRENVLLQLEAAYWERLMNTYTEVKRRLDYQ 195
Query: 119 AALESIQRRISQKHMVSWVVSHVLKSITPDQDKQSIKKCISDLKALAAR 167
+++RR++Q+HMV W+V++V K+ITPDQ+KQ++ +CI+DL ALA R
Sbjct: 196 LEKSNLERRLAQRHMVDWIVTNVTKAITPDQEKQTLDRCIADLAALAPR 244
>gi|195174131|ref|XP_002027834.1| GL16292 [Drosophila persimilis]
gi|194115510|gb|EDW37553.1| GL16292 [Drosophila persimilis]
Length = 245
Score = 112 bits (279), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 54/108 (50%), Positives = 77/108 (71%)
Query: 60 KLASLKGAIENELWNQERSKAQAVLYEAKRENIQMQLEAVFRERALFAYQQVKNRLEYQA 119
+L L AIE E Q R+ +L +AK+ENI +QLEA FRERA+ Y +VK RL+YQ
Sbjct: 134 ELKVLSDAIEAEKKEQWRADGALLLMDAKKENIALQLEAAFRERAMNVYSEVKRRLDYQV 193
Query: 120 ALESIQRRISQKHMVSWVVSHVLKSITPDQDKQSIKKCISDLKALAAR 167
++RR++QKHMV+W+ ++VL SI+P Q+K+++ KCI+DL ALA R
Sbjct: 194 ECRHVERRLNQKHMVNWITTNVLASISPQQEKETLNKCIADLSALALR 241
>gi|125979699|ref|XP_001353882.1| GA20881 [Drosophila pseudoobscura pseudoobscura]
gi|54640866|gb|EAL29617.1| GA20881 [Drosophila pseudoobscura pseudoobscura]
Length = 245
Score = 112 bits (279), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 54/108 (50%), Positives = 77/108 (71%)
Query: 60 KLASLKGAIENELWNQERSKAQAVLYEAKRENIQMQLEAVFRERALFAYQQVKNRLEYQA 119
+L L AIE E Q R+ +L +AK+ENI +QLEA FRERA+ Y +VK RL+YQ
Sbjct: 134 ELKVLSDAIEAEKKEQWRADGALLLMDAKKENIALQLEAAFRERAMNVYSEVKRRLDYQV 193
Query: 120 ALESIQRRISQKHMVSWVVSHVLKSITPDQDKQSIKKCISDLKALAAR 167
++RR++QKHMV+W+ ++VL SI+P Q+K+++ KCI+DL ALA R
Sbjct: 194 ECRHVERRLNQKHMVNWITTNVLASISPQQEKETLNKCIADLSALALR 241
>gi|391342601|ref|XP_003745605.1| PREDICTED: ATP synthase subunit b, mitochondrial-like [Metaseiulus
occidentalis]
Length = 255
Score = 110 bits (275), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 53/114 (46%), Positives = 86/114 (75%), Gaps = 2/114 (1%)
Query: 55 IRTNDKLASLKGAIENELWNQERSKAQAVLYEAKRENIQMQLEAVFRERALFAYQQVKNR 114
+ N+K S++ AI+ EL Q+++ AQ ++ E+K+ENI +QLEA +R R L +Q+VK +
Sbjct: 144 VHENEK--SIEEAIQGELLAQKQTAAQDMIIESKKENIALQLEAEYRRRNLKVFQEVKKK 201
Query: 115 LEYQAALESIQRRISQKHMVSWVVSHVLKSITPDQDKQSIKKCISDLKALAARA 168
L+Y + +I+RR+ Q+HMV W+VS+VLKS++P Q+K++ +CI DLK+LA+RA
Sbjct: 202 LDYHLEVVNIERRLQQQHMVDWIVSNVLKSLSPQQEKEAFNQCIVDLKSLASRA 255
>gi|1632782|emb|CAA70164.1| Fo-ATP synthase subunit b [Drosophila melanogaster]
Length = 184
Score = 110 bits (275), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 54/108 (50%), Positives = 75/108 (69%)
Query: 60 KLASLKGAIENELWNQERSKAQAVLYEAKRENIQMQLEAVFRERALFAYQQVKNRLEYQA 119
+L L AIE E Q R+ +L EAK+ENI +QLEA FRERA+ Y +V L+YQ
Sbjct: 73 ELKVLSDAIEAEKKEQWRADGALLLMEAKKENIALQLEAAFRERAMNVYSEVNRPLDYQV 132
Query: 120 ALESIQRRISQKHMVSWVVSHVLKSITPDQDKQSIKKCISDLKALAAR 167
++RR+SQKHMV+W+ ++VL SI+P Q+K+++ KCI+DL ALA R
Sbjct: 133 ECRHVERRLSQKHMVNWITTNVLASISPQQEKETLNKCIADLSALALR 180
>gi|350538179|ref|NP_001232085.1| putative ATP synthase subunit b [Taeniopygia guttata]
gi|197127768|gb|ACH44266.1| putative ATP synthase subunit b [Taeniopygia guttata]
Length = 252
Score = 110 bits (275), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 54/111 (48%), Positives = 80/111 (72%)
Query: 58 NDKLASLKGAIENELWNQERSKAQAVLYEAKRENIQMQLEAVFRERALFAYQQVKNRLEY 117
N+ + SL+ AIE+E Q R++ ++ L++AKR N+ M LEA +RER L Y +VK RL+Y
Sbjct: 138 NEAVQSLQTAIEDEKKEQWRAEGRSYLFDAKRNNVAMLLEANYRERLLMVYNEVKKRLDY 197
Query: 118 QAALESIQRRISQKHMVSWVVSHVLKSITPDQDKQSIKKCISDLKALAARA 168
Q A+++++R+ Q HM+ WV +V++SITP Q K+SI KCI DLKAL+ A
Sbjct: 198 QVAMQTLKRQKEQDHMIQWVERNVVQSITPQQQKESIAKCILDLKALSKSA 248
>gi|197127769|gb|ACH44267.1| putative ATP synthase subunit b [Taeniopygia guttata]
Length = 252
Score = 110 bits (275), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 54/111 (48%), Positives = 80/111 (72%)
Query: 58 NDKLASLKGAIENELWNQERSKAQAVLYEAKRENIQMQLEAVFRERALFAYQQVKNRLEY 117
N+ + SL+ AIE+E Q R++ ++ L++AKR N+ M LEA +RER L Y +VK RL+Y
Sbjct: 138 NEAVQSLQTAIEDEKKEQWRAEGRSYLFDAKRNNVAMLLEANYRERLLMVYNEVKKRLDY 197
Query: 118 QAALESIQRRISQKHMVSWVVSHVLKSITPDQDKQSIKKCISDLKALAARA 168
Q A+++++R+ Q HM+ WV +V++SITP Q K+SI KCI DLKAL+ A
Sbjct: 198 QVAMQTLKRQKEQDHMIQWVERNVVQSITPQQQKESIAKCILDLKALSKSA 248
>gi|327271417|ref|XP_003220484.1| PREDICTED: ATP synthase subunit b, mitochondrial-like isoform 2
[Anolis carolinensis]
Length = 250
Score = 110 bits (275), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 54/108 (50%), Positives = 76/108 (70%)
Query: 58 NDKLASLKGAIENELWNQERSKAQAVLYEAKRENIQMQLEAVFRERALFAYQQVKNRLEY 117
ND +ASL+ AIE+E Q R + + L++AKR N+ M LE +RER + Y VK RL+Y
Sbjct: 136 NDSIASLQKAIEDEKKEQWRIEGRHYLFDAKRNNVAMLLETNYRERLMTVYNDVKKRLDY 195
Query: 118 QAALESIQRRISQKHMVSWVVSHVLKSITPDQDKQSIKKCISDLKALA 165
Q AL+ ++RR+ Q HM++WV +V +SITP Q+K+SI KCI DLK L+
Sbjct: 196 QVALQHLKRRMEQDHMINWVEQNVRQSITPQQEKESIAKCILDLKMLS 243
>gi|327271415|ref|XP_003220483.1| PREDICTED: ATP synthase subunit b, mitochondrial-like isoform 1
[Anolis carolinensis]
Length = 253
Score = 110 bits (274), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 54/108 (50%), Positives = 76/108 (70%)
Query: 58 NDKLASLKGAIENELWNQERSKAQAVLYEAKRENIQMQLEAVFRERALFAYQQVKNRLEY 117
ND +ASL+ AIE+E Q R + + L++AKR N+ M LE +RER + Y VK RL+Y
Sbjct: 139 NDSIASLQKAIEDEKKEQWRIEGRHYLFDAKRNNVAMLLETNYRERLMTVYNDVKKRLDY 198
Query: 118 QAALESIQRRISQKHMVSWVVSHVLKSITPDQDKQSIKKCISDLKALA 165
Q AL+ ++RR+ Q HM++WV +V +SITP Q+K+SI KCI DLK L+
Sbjct: 199 QVALQHLKRRMEQDHMINWVEQNVRQSITPQQEKESIAKCILDLKMLS 246
>gi|225715326|gb|ACO13509.1| ATP synthase subunit b, mitochondrial precursor [Esox lucius]
Length = 251
Score = 109 bits (273), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 70/184 (38%), Positives = 99/184 (53%), Gaps = 23/184 (12%)
Query: 5 FVMQHGKFDTIGPVSLGEPIWVSDMAKCAQVMNRSVV-----LTWVMYQSHRAGK--IRT 57
F + + K GP LG + ++K ++N + T ++Y R G
Sbjct: 59 FQLLYPKTGVTGPYMLGAGLLTYFLSKEIYIINHETISAACMATVIIYSVKRFGPDVAAF 118
Query: 58 NDKL----------------ASLKGAIENELWNQERSKAQAVLYEAKRENIQMQLEAVFR 101
DKL ASL AIE+E Q + Q +L++AKR N+ M LE +R
Sbjct: 119 ADKLNEEKLQKAEEVKALAVASLAQAIEDEKKEQWGVEGQHLLFDAKRNNVAMLLETNWR 178
Query: 102 ERALFAYQQVKNRLEYQAALESIQRRISQKHMVSWVVSHVLKSITPDQDKQSIKKCISDL 161
ER + +VK RL+YQ AL+S+ RR+ Q+HMVSWV +V+ SITP Q+K SI KCI+DL
Sbjct: 179 ERVHTVHNEVKKRLDYQIALQSLHRRMEQEHMVSWVEKNVVSSITPQQEKTSIAKCITDL 238
Query: 162 KALA 165
K+LA
Sbjct: 239 KSLA 242
>gi|318068030|ref|NP_001187881.1| mitochondrial ATP synthase subunit b [Ictalurus punctatus]
gi|308324224|gb|ADO29247.1| mitochondrial ATP synthase subunit b [Ictalurus punctatus]
Length = 252
Score = 108 bits (271), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 54/104 (51%), Positives = 74/104 (71%)
Query: 61 LASLKGAIENELWNQERSKAQAVLYEAKRENIQMQLEAVFRERALFAYQQVKNRLEYQAA 120
+ SL AIE E Q R + + +L++AKR N+ M LE +RER + +VK RL+YQ A
Sbjct: 139 MGSLAEAIEQEKKEQWRVEGRHMLFDAKRNNVAMLLETNYRERFHMVHNEVKKRLDYQVA 198
Query: 121 LESIQRRISQKHMVSWVVSHVLKSITPDQDKQSIKKCISDLKAL 164
L+++QRR+ Q+HMV+WV V+KSITP Q+K+SI KCISDLK L
Sbjct: 199 LQNLQRRLEQEHMVNWVEQSVIKSITPQQEKESIAKCISDLKVL 242
>gi|326933780|ref|XP_003212977.1| PREDICTED: ATP synthase subunit b, mitochondrial-like, partial
[Meleagris gallopavo]
Length = 253
Score = 108 bits (270), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 56/111 (50%), Positives = 77/111 (69%)
Query: 58 NDKLASLKGAIENELWNQERSKAQAVLYEAKRENIQMQLEAVFRERALFAYQQVKNRLEY 117
N+ + +L+ AIE E Q R + ++ L++AKR NI M LEA +RER L Y +VK RL+Y
Sbjct: 139 NEAIKALETAIEEEKKEQWRVEGRSYLFDAKRNNIAMLLEANYRERLLTVYNEVKKRLDY 198
Query: 118 QAALESIQRRISQKHMVSWVVSHVLKSITPDQDKQSIKKCISDLKALAARA 168
Q AL++++R+ Q HMV WV V++SITP Q K+SI KCI DLKAL+ A
Sbjct: 199 QVALQNLKRQKEQDHMVQWVEKSVIQSITPQQQKESIAKCILDLKALSKSA 249
>gi|363743079|ref|XP_417993.3| PREDICTED: ATP synthase subunit b, mitochondrial [Gallus gallus]
Length = 255
Score = 108 bits (269), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 56/111 (50%), Positives = 77/111 (69%)
Query: 58 NDKLASLKGAIENELWNQERSKAQAVLYEAKRENIQMQLEAVFRERALFAYQQVKNRLEY 117
N+ + +L+ AIE E Q R + ++ L++AKR NI M LEA +RER L Y +VK RL+Y
Sbjct: 141 NEAIKALETAIEEEKKEQWRIEGRSYLFDAKRNNIAMLLEANYRERLLTVYNEVKKRLDY 200
Query: 118 QAALESIQRRISQKHMVSWVVSHVLKSITPDQDKQSIKKCISDLKALAARA 168
Q AL++++R+ Q HMV WV V++SITP Q K+SI KCI DLKAL+ A
Sbjct: 201 QVALQNLKRQKEQDHMVQWVEKSVIQSITPQQQKESIAKCILDLKALSKSA 251
>gi|332016630|gb|EGI57501.1| ATP synthase subunit b, mitochondrial [Acromyrmex echinatior]
Length = 238
Score = 107 bits (268), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 49/110 (44%), Positives = 78/110 (70%)
Query: 58 NDKLASLKGAIENELWNQERSKAQAVLYEAKRENIQMQLEAVFRERALFAYQQVKNRLEY 117
N ++ + I +E Q Q ++ + K+EN++MQLE +RER + YQ+VK RL+Y
Sbjct: 128 NSEIKYYEDIISHEKNEQSSLDGQKMIMDIKKENVKMQLEGTYRERLVQVYQEVKKRLDY 187
Query: 118 QAALESIQRRISQKHMVSWVVSHVLKSITPDQDKQSIKKCISDLKALAAR 167
Q +++++RRI+QKHMV W+V+ VLKSITP+Q+K ++ +CI DL+ LAA+
Sbjct: 188 QIQIQNLERRIAQKHMVQWIVNEVLKSITPEQEKATLHQCIKDLEVLAAK 237
>gi|229366496|gb|ACQ58228.1| ATP synthase subunit b, mitochondrial precursor [Anoplopoma
fimbria]
Length = 252
Score = 107 bits (266), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 53/105 (50%), Positives = 76/105 (72%)
Query: 61 LASLKGAIENELWNQERSKAQAVLYEAKRENIQMQLEAVFRERALFAYQQVKNRLEYQAA 120
+ASL AIE+E Q R++ +++L++AKR N+ M LE +RER +VK RL+YQ A
Sbjct: 139 MASLAQAIEDEKKEQWRAEGRSMLFDAKRNNVAMLLETNYRERLHMVNNEVKRRLDYQVA 198
Query: 121 LESIQRRISQKHMVSWVVSHVLKSITPDQDKQSIKKCISDLKALA 165
L+++ R+ Q+HMV+WV V+ SITP Q+K+SI KCI+DLKALA
Sbjct: 199 LQNLHVRMEQEHMVNWVRKSVVSSITPQQEKESIAKCITDLKALA 243
>gi|307191846|gb|EFN75272.1| ATP synthase subunit b, mitochondrial [Harpegnathos saltator]
Length = 230
Score = 106 bits (265), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 47/101 (46%), Positives = 74/101 (73%)
Query: 68 IENELWNQERSKAQAVLYEAKRENIQMQLEAVFRERALFAYQQVKNRLEYQAALESIQRR 127
I +E Q + Q ++ + K+EN++MQLE +RER + YQ+VK RL+YQ +++++RR
Sbjct: 130 IAHEKQQQYSLEGQKMIMDIKKENVKMQLEGTYRERMMRVYQEVKKRLDYQMQIQNLERR 189
Query: 128 ISQKHMVSWVVSHVLKSITPDQDKQSIKKCISDLKALAARA 168
I+QKHM W++ VLKSITPDQ+K ++++CI DL+ LAA+
Sbjct: 190 ITQKHMAQWIIDGVLKSITPDQEKATLQQCIKDLEVLAAKP 230
>gi|41394381|gb|AAS02294.1| ATP synthase subunit b [Bombina orientalis]
Length = 250
Score = 106 bits (265), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 70/187 (37%), Positives = 97/187 (51%), Gaps = 23/187 (12%)
Query: 5 FVMQHGKFDTIGPVSLGEPIWVSDMAKCAQVMNR-----SVVLTWVMYQSHRAGKI---- 55
F + K GP G + V ++K V+N + + + Y + G
Sbjct: 60 FQFLYPKTGVTGPYMFGTGLLVYILSKEIYVINHETFAAACIAICLFYGIKKFGPSVAAF 119
Query: 56 ---RTNDKLA-----------SLKGAIENELWNQERSKAQAVLYEAKRENIQMQLEAVFR 101
N+K+A +L+ AIE E Q R + + L++AKR NI M LE +R
Sbjct: 120 ADELNNEKVAKAQAVKDSAIKNLERAIEEETKEQWRVEGRNNLFDAKRNNIAMLLEINYR 179
Query: 102 ERALFAYQQVKNRLEYQAALESIQRRISQKHMVSWVVSHVLKSITPDQDKQSIKKCISDL 161
ER L Y +VK RL+YQ L+ +QRR Q HM+SWV S+V +SITP Q K+SI KCISDL
Sbjct: 180 ERLLNVYNEVKKRLDYQVGLQHLQRRKEQDHMISWVESNVRQSITPQQQKESIAKCISDL 239
Query: 162 KALAARA 168
K L+ A
Sbjct: 240 KLLSKSA 246
>gi|449271705|gb|EMC81989.1| ATP synthase subunit b, mitochondrial, partial [Columba livia]
Length = 228
Score = 106 bits (265), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 54/111 (48%), Positives = 75/111 (67%)
Query: 58 NDKLASLKGAIENELWNQERSKAQAVLYEAKRENIQMQLEAVFRERALFAYQQVKNRLEY 117
N+ + L+ AIE E Q R + + L++AKR NI M LE +RER L Y +VK RL+Y
Sbjct: 114 NEAIKGLETAIEEEKKEQWRVEGRKYLFDAKRNNIAMLLETNYRERLLTVYNEVKKRLDY 173
Query: 118 QAALESIQRRISQKHMVSWVVSHVLKSITPDQDKQSIKKCISDLKALAARA 168
Q A+++++R+ Q HM+ WV +V++SITP Q K SI KCI DLKAL+ RA
Sbjct: 174 QVAMQNLKRQKEQDHMIQWVEKNVVQSITPQQQKDSIAKCILDLKALSKRA 224
>gi|54400426|ref|NP_001005960.1| ATP synthase subunit b, mitochondrial [Danio rerio]
gi|53734442|gb|AAH83308.1| ATP synthase, H+ transporting, mitochondrial F0 complex, subunit b,
isoform 1 [Danio rerio]
gi|182892156|gb|AAI65938.1| Atp5f1 protein [Danio rerio]
Length = 252
Score = 106 bits (265), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 53/108 (49%), Positives = 74/108 (68%)
Query: 58 NDKLASLKGAIENELWNQERSKAQAVLYEAKRENIQMQLEAVFRERALFAYQQVKNRLEY 117
+ +AS IENE Q R + +++L++AKR N+ M LE +RER +VK RL+Y
Sbjct: 136 DQSMASYAQGIENEKKEQWRVEGRSMLFDAKRNNVAMLLEINYRERLHMVTNEVKKRLDY 195
Query: 118 QAALESIQRRISQKHMVSWVVSHVLKSITPDQDKQSIKKCISDLKALA 165
Q L+++ RR+ Q+HMV+WV V+KSITP Q+K+SI KCISDLK LA
Sbjct: 196 QVELQNLHRRMEQEHMVNWVEQSVVKSITPQQEKESIAKCISDLKVLA 243
>gi|383861676|ref|XP_003706311.1| PREDICTED: ATP synthase subunit b, mitochondrial-like [Megachile
rotundata]
Length = 243
Score = 105 bits (263), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 60/163 (36%), Positives = 104/163 (63%), Gaps = 8/163 (4%)
Query: 5 FVMQHGKFDTIGPVSLGEPIWVSDMAKCAQVMNRSVVLTWVMYQSHRAGKIRTNDKLASL 64
FV++H ++ + +S+ + + AK +++ V + R D+L L
Sbjct: 85 FVLEHEFYNGLSLLSIIMFVHIKYGAKIGAALDKKVAEYDAELEQTRI------DELTEL 138
Query: 65 KGAIENELWNQE-RSKAQAVLYEAKRENIQMQLEAVFRERALFAYQQVKNRLEYQAALES 123
+ +++ EL Q+ + AQ ++Y+ K++NI +QLEA +RER Y +VK RL+YQA +E+
Sbjct: 139 EKSVK-ELEKQKWMADAQFLIYDIKKQNILVQLEAAYRERLAKVYSEVKKRLDYQAQVEA 197
Query: 124 IQRRISQKHMVSWVVSHVLKSITPDQDKQSIKKCISDLKALAA 166
++RRI+Q+HMV W+ + VLK+ITP+ +K ++ +CISDL+ALAA
Sbjct: 198 VERRIAQRHMVQWITNSVLKAITPELEKANLAQCISDLEALAA 240
>gi|348514668|ref|XP_003444862.1| PREDICTED: ATP synthase subunit b, mitochondrial-like [Oreochromis
niloticus]
Length = 252
Score = 105 bits (262), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 51/104 (49%), Positives = 73/104 (70%)
Query: 61 LASLKGAIENELWNQERSKAQAVLYEAKRENIQMQLEAVFRERALFAYQQVKNRLEYQAA 120
++SL AIE+E Q R + +A+L++AKR N+ M LE +RER +VK RL+YQ A
Sbjct: 139 MSSLAQAIEDEKKEQWRVEGRAMLFDAKRNNVAMLLETNYRERVHMVTNEVKRRLDYQIA 198
Query: 121 LESIQRRISQKHMVSWVVSHVLKSITPDQDKQSIKKCISDLKAL 164
L+ + RR+ Q+HM++WV V+ SITP Q+K+SI KCI+DLK L
Sbjct: 199 LQDLNRRLEQEHMINWVEKSVISSITPQQEKESIAKCITDLKVL 242
>gi|432864844|ref|XP_004070445.1| PREDICTED: ATP synthase subunit b, mitochondrial-like [Oryzias
latipes]
Length = 252
Score = 105 bits (262), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 63/183 (34%), Positives = 100/183 (54%), Gaps = 23/183 (12%)
Query: 5 FVMQHGKFDTIGPVSLGEPIWVSDMAKCAQVMNRSV-----VLTWVMYQSHRAGKIRTN- 58
F + + K GP LG + + ++K V+N + T ++Y + G N
Sbjct: 60 FQLLYPKTGVTGPYMLGTGLILYMLSKEIYVINHETFAAASIGTAIIYGVKKFGPTVANL 119
Query: 59 -DKL----------------ASLKGAIENELWNQERSKAQAVLYEAKRENIQMQLEAVFR 101
DK+ +SL AI++E Q R + +++L++AKR N+ M LE +R
Sbjct: 120 ADKINEEKVAKAQEVKDVAISSLTQAIDDEKKEQWRVEGRSMLFDAKRNNVAMLLETNYR 179
Query: 102 ERALFAYQQVKNRLEYQAALESIQRRISQKHMVSWVVSHVLKSITPDQDKQSIKKCISDL 161
ER +VK RL+YQ AL+++ R+ Q+HM++WV +V+ SITP Q+K+SI KCI+DL
Sbjct: 180 ERLHMVTNEVKRRLDYQIALQNLHHRLEQEHMINWVEKNVISSITPQQEKESIAKCITDL 239
Query: 162 KAL 164
K L
Sbjct: 240 KVL 242
>gi|349802111|gb|AEQ16528.1| hypothetical protein [Pipa carvalhoi]
Length = 221
Score = 105 bits (261), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 62/175 (35%), Positives = 97/175 (55%), Gaps = 14/175 (8%)
Query: 5 FVMQHGKFDTIGPVSLGEPIWVSDMAKCAQVMNRSV-----VLTWVMYQSHRAGKI---- 55
F + K GP LG + V ++K V+N + ++Y + G
Sbjct: 47 FQFLYPKTGVTGPYMLGTGLLVYLLSKEIYVINHETFAAASIGIVIIYGIKKFGPAVASF 106
Query: 56 --RTNDKLASLKGAIENELWNQERSKAQAVLYEAKRENIQMQLEAVFRERALFAYQQVKN 113
+ N++ + A+++ W R++ + L++AKR N+ M LE +RER L Y +VK
Sbjct: 107 ADKLNEEKVAKAQAVKDSAW---RAEGRNQLFDAKRNNVTMLLEINYRERLLNVYNEVKK 163
Query: 114 RLEYQAALESIQRRISQKHMVSWVVSHVLKSITPDQDKQSIKKCISDLKALAARA 168
RL+YQ AL+ +QRR Q HM++WV +V++SITP Q K+SI KCI+DLK L+ A
Sbjct: 164 RLDYQVALQHLQRRKEQDHMINWVEKNVVQSITPQQQKESIAKCITDLKLLSKTA 218
>gi|45360885|ref|NP_989118.1| ATP synthase, H+ transporting, mitochondrial Fo complex, subunit B1
[Xenopus (Silurana) tropicalis]
gi|38512249|gb|AAH61296.1| ATP synthase subunit B [Xenopus (Silurana) tropicalis]
gi|89272892|emb|CAJ82967.1| ATP synthase, H+ transporting, mitochondrial F0 complex, subunit b,
isoform 1 [Xenopus (Silurana) tropicalis]
Length = 250
Score = 105 bits (261), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 54/111 (48%), Positives = 75/111 (67%)
Query: 58 NDKLASLKGAIENELWNQERSKAQAVLYEAKRENIQMQLEAVFRERALFAYQQVKNRLEY 117
+ L +L+ AIE E Q R + + L++AKR N+ M LE +RER L Y +VK RL+Y
Sbjct: 136 DSALKNLERAIEEENKEQWRVEGRHHLFDAKRNNVTMLLEINYRERILNVYNEVKKRLDY 195
Query: 118 QAALESIQRRISQKHMVSWVVSHVLKSITPDQDKQSIKKCISDLKALAARA 168
Q AL+ +QRR Q HM++WV +V++SITP Q K+SI KCI+DLK L+ A
Sbjct: 196 QVALQHLQRRKEQDHMINWVEKNVIQSITPQQQKESIAKCITDLKVLSKTA 246
>gi|350413834|ref|XP_003490127.1| PREDICTED: ATP synthase subunit b, mitochondrial-like [Bombus
impatiens]
Length = 240
Score = 104 bits (259), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 48/101 (47%), Positives = 75/101 (74%), Gaps = 3/101 (2%)
Query: 68 IENELWNQERSKAQAVLYEAKRENIQMQLEAVFRERALFAYQQVKNRLEYQAALESIQRR 127
+E E W R++ Q ++Y+AK++NI MQLEA +RE Y +VK L+Y A +++I RR
Sbjct: 143 LEKEKW---RTEGQLMIYDAKKQNIMMQLEASYRENLATVYTEVKKILDYHAQIDNIDRR 199
Query: 128 ISQKHMVSWVVSHVLKSITPDQDKQSIKKCISDLKALAARA 168
I+QKHMV W+ + VLK+ITP+Q+K ++ +CI DL++L+A+A
Sbjct: 200 IAQKHMVQWITNSVLKAITPEQEKANLLQCIKDLESLSAKA 240
>gi|332374750|gb|AEE62516.1| unknown [Dendroctonus ponderosae]
Length = 249
Score = 103 bits (257), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 58/110 (52%), Positives = 76/110 (69%), Gaps = 1/110 (0%)
Query: 56 RTNDKLASLKGAIENELWNQERSKAQAVLYEAKRENIQMQLEAVFRERALFAYQQVKNRL 115
R N+K L+ I NE Q + Q +L AKREN+ +QLEA +RER L AYQ VKNRL
Sbjct: 139 RKNEK-EVLQTQIANEEKLQWSIEGQNLLLAAKRENVALQLEANYRERLLTAYQAVKNRL 197
Query: 116 EYQAALESIQRRISQKHMVSWVVSHVLKSITPDQDKQSIKKCISDLKALA 165
EYQ + +RRI+QK+++ +VV+ V SITPDQ+KQ+I KCISDL L+
Sbjct: 198 EYQVEKTNAERRIAQKNLIEYVVARVKSSITPDQEKQNINKCISDLALLS 247
>gi|268607737|ref|NP_001161324.1| ATP synthase subunit b, mitochondrial [Nasonia vitripennis]
Length = 238
Score = 103 bits (257), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 50/105 (47%), Positives = 74/105 (70%)
Query: 60 KLASLKGAIENELWNQERSKAQAVLYEAKRENIQMQLEAVFRERALFAYQQVKNRLEYQA 119
++ +LK IE+E Q R+ +Q ++ + K+ENI MQLEA +RER Y +VK RL+YQ
Sbjct: 131 QIDTLKELIEHEKKEQWRTDSQKMIMDIKKENIAMQLEAAYRERLAHVYSEVKKRLDYQV 190
Query: 120 ALESIQRRISQKHMVSWVVSHVLKSITPDQDKQSIKKCISDLKAL 164
+ ++RR+SQKHMV W+V V K+ TP+Q+K + +CISDL+AL
Sbjct: 191 QILDVERRLSQKHMVQWIVDSVKKAFTPEQEKAVLSQCISDLQAL 235
>gi|47228780|emb|CAG07512.1| unnamed protein product [Tetraodon nigroviridis]
Length = 248
Score = 103 bits (257), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 51/105 (48%), Positives = 74/105 (70%)
Query: 61 LASLKGAIENELWNQERSKAQAVLYEAKRENIQMQLEAVFRERALFAYQQVKNRLEYQAA 120
++SL AIE+E Q R +++L++AKR N+ M LE +RER +VK RL+YQ A
Sbjct: 139 MSSLTQAIEDEKKEQWRVDGRSMLFDAKRNNVAMLLEINYRERLHMVTNEVKRRLDYQIA 198
Query: 121 LESIQRRISQKHMVSWVVSHVLKSITPDQDKQSIKKCISDLKALA 165
L+ + RR+ ++HMV+WV V+ SI+P Q+K+SI KCI+DLKALA
Sbjct: 199 LQDLHRRLEKEHMVNWVEKSVVSSISPQQEKESITKCIADLKALA 243
>gi|209731342|gb|ACI66540.1| ATP synthase subunit b, mitochondrial precursor [Salmo salar]
gi|221220554|gb|ACM08938.1| ATP synthase subunit b, mitochondrial precursor [Salmo salar]
gi|223646598|gb|ACN10057.1| ATP synthase subunit b, mitochondrial precursor [Salmo salar]
gi|223672445|gb|ACN12404.1| ATP synthase subunit b, mitochondrial precursor [Salmo salar]
gi|303665221|gb|ADM16180.1| ATP synthase subunit b, mitochondrial precursor [Salmo salar]
gi|303665675|gb|ADM16197.1| ATP synthase subunit b, mitochondrial precursor [Salmo salar]
Length = 251
Score = 102 bits (254), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 51/105 (48%), Positives = 73/105 (69%)
Query: 61 LASLKGAIENELWNQERSKAQAVLYEAKRENIQMQLEAVFRERALFAYQQVKNRLEYQAA 120
+ SL AI++E Q R++ + +L++AKR N+ M LE RER +VK RL+YQ A
Sbjct: 138 MTSLAQAIQDEKKEQWRAEGRQMLFDAKRNNVAMLLETNRRERVHMVTNEVKKRLDYQIA 197
Query: 121 LESIQRRISQKHMVSWVVSHVLKSITPDQDKQSIKKCISDLKALA 165
L+++ RR+ Q+HMV+WV +V+ SITP Q+K SI KCI+DLK LA
Sbjct: 198 LQTLHRRMEQEHMVNWVEKNVVTSITPQQEKTSIAKCITDLKVLA 242
>gi|209736864|gb|ACI69301.1| ATP synthase subunit b, mitochondrial precursor [Salmo salar]
gi|304376489|gb|ACI66802.2| ATP synthase subunit b, mitochondrial precursor [Salmo salar]
Length = 251
Score = 102 bits (254), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 51/105 (48%), Positives = 73/105 (69%)
Query: 61 LASLKGAIENELWNQERSKAQAVLYEAKRENIQMQLEAVFRERALFAYQQVKNRLEYQAA 120
+ SL AI++E Q R++ + +L++AKR N+ M LE RER +VK RL+YQ A
Sbjct: 138 MTSLAQAIQDEKKEQWRAEGRQMLFDAKRNNVAMLLETNRRERVHMVTNEVKKRLDYQIA 197
Query: 121 LESIQRRISQKHMVSWVVSHVLKSITPDQDKQSIKKCISDLKALA 165
L+++ RR+ Q+HMV+WV +V+ SITP Q+K SI KCI+DLK LA
Sbjct: 198 LQTLHRRMEQEHMVNWVEKNVVTSITPQQEKTSIAKCITDLKVLA 242
>gi|213513562|ref|NP_001133163.1| ATP synthase subunit b, mitochondrial [Salmo salar]
gi|197632249|gb|ACH70848.1| ATP synthase, H+ transporting, mitochondrial F0 complex, subunit b,
isoform 1 [Salmo salar]
Length = 251
Score = 102 bits (254), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 51/105 (48%), Positives = 73/105 (69%)
Query: 61 LASLKGAIENELWNQERSKAQAVLYEAKRENIQMQLEAVFRERALFAYQQVKNRLEYQAA 120
+ SL AI++E Q R++ + +L++AKR N+ M LE RER +VK RL+YQ A
Sbjct: 138 MTSLAQAIQDEKKEQWRAEGRQMLFDAKRNNVAMLLETNRRERVHMVTNEVKKRLDYQIA 197
Query: 121 LESIQRRISQKHMVSWVVSHVLKSITPDQDKQSIKKCISDLKALA 165
L+++ RR+ Q+HMV+WV +V+ SITP Q+K SI KCI+DLK LA
Sbjct: 198 LQTLHRRMEQEHMVNWVEKNVVTSITPQQEKASIAKCITDLKVLA 242
>gi|148234340|ref|NP_001079710.1| ATP synthase, H+ transporting, mitochondrial Fo complex, subunit B1
[Xenopus laevis]
gi|6911053|gb|AAF31360.1| ATP synthase subunit B [Xenopus laevis]
gi|28981424|gb|AAH48772.1| MGC53399 protein [Xenopus laevis]
Length = 250
Score = 102 bits (253), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 52/111 (46%), Positives = 76/111 (68%)
Query: 58 NDKLASLKGAIENELWNQERSKAQAVLYEAKRENIQMQLEAVFRERALFAYQQVKNRLEY 117
+ + +L+ AIE E Q R++ + L++AKR N+ + LE +RER L + +VK RL+Y
Sbjct: 136 DSAIKNLERAIEEEKKEQWRAEGRHHLFDAKRNNVSVLLEINYRERLLNVFNEVKKRLDY 195
Query: 118 QAALESIQRRISQKHMVSWVVSHVLKSITPDQDKQSIKKCISDLKALAARA 168
Q AL+ +QRR Q HM++WV +V++SITP Q K+SI KCI+DLK LA A
Sbjct: 196 QVALQHLQRRKEQDHMINWVEKNVVQSITPQQQKESIAKCITDLKLLAKTA 246
>gi|260797701|ref|XP_002593840.1| hypothetical protein BRAFLDRAFT_121090 [Branchiostoma floridae]
gi|229279070|gb|EEN49851.1| hypothetical protein BRAFLDRAFT_121090 [Branchiostoma floridae]
Length = 246
Score = 101 bits (252), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 65/184 (35%), Positives = 100/184 (54%), Gaps = 23/184 (12%)
Query: 5 FVMQHGKFDTIGPVSLGEPIWVSDMAKCAQVMNR-----SVVLTWVMYQSHRAG------ 53
F + K GP G + + ++K V+N + +++V+Y R G
Sbjct: 60 FQFFYKKTGVTGPYVFGTGLIATLLSKEYLVVNNEFIAGGIFVSFVVYCIRRFGPDVATY 119
Query: 54 --KIRTN--DKLASLKG--------AIENELWNQERSKAQAVLYEAKRENIQMQLEAVFR 101
K+R D + + KG AIE E Q R++ L++AK+ N+ MQLE +R
Sbjct: 120 ADKLRQERLDFIDNKKGRFINDCETAIETEKKEQWRAEGVDYLFDAKKANVAMQLETAYR 179
Query: 102 ERALFAYQQVKNRLEYQAALESIQRRISQKHMVSWVVSHVLKSITPDQDKQSIKKCISDL 161
ER VK RL+YQ +E+ QRR++Q+HM WVV++V+KSITP Q+K+++ KCI DL
Sbjct: 180 ERLHEVSNAVKRRLDYQLDVETTQRRMAQEHMADWVVNNVVKSITPQQEKEALAKCIEDL 239
Query: 162 KALA 165
K +A
Sbjct: 240 KRMA 243
>gi|410899348|ref|XP_003963159.1| PREDICTED: ATP synthase subunit b, mitochondrial-like [Takifugu
rubripes]
Length = 251
Score = 101 bits (251), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 65/184 (35%), Positives = 97/184 (52%), Gaps = 23/184 (12%)
Query: 5 FVMQHGKFDTIGPVSLGEPIWVSDMAKCAQVMNR-----SVVLTWVMYQSHRAGK--IRT 57
F + K GP LG + V ++K V+N + + ++Y + G
Sbjct: 60 FEFLYPKTGVTGPYMLGTGLLVYLLSKEIYVINHETFAAACIGAIIVYGVKKYGPSVAAY 119
Query: 58 NDKL----------------ASLKGAIENELWNQERSKAQAVLYEAKRENIQMQLEAVFR 101
DKL +SL A+ +E Q R +AVL++AKR N+ M LE +R
Sbjct: 120 ADKLNEEKLAKAHEVKEAAISSLTQAVADEKKEQWRVDGRAVLFDAKRNNVAMLLEINYR 179
Query: 102 ERALFAYQQVKNRLEYQAALESIQRRISQKHMVSWVVSHVLKSITPDQDKQSIKKCISDL 161
ER +VK RL+YQ AL+ + RR+ ++HMV+WV V+ SI+P Q+K+SI KCI+DL
Sbjct: 180 ERLHMVTNEVKRRLDYQIALQDLHRRMEKEHMVNWVEKSVIGSISPQQEKESITKCIADL 239
Query: 162 KALA 165
KAL+
Sbjct: 240 KALS 243
>gi|340710074|ref|XP_003393623.1| PREDICTED: ATP synthase subunit b, mitochondrial-like [Bombus
terrestris]
Length = 240
Score = 101 bits (251), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 58/149 (38%), Positives = 92/149 (61%), Gaps = 24/149 (16%)
Query: 41 VLTWVMYQSHRAG-KIRT--NDKLASLKG---------------AIEN---ELWNQERSK 79
+L+ V+Y S++ G K+ T + K+ +G AI+N E W E
Sbjct: 95 LLSIVLYASYKVGPKLATFLDKKIDEFEGDLNASKDEVIQGQKDAIDNLEKEKWYTE--- 151
Query: 80 AQAVLYEAKRENIQMQLEAVFRERALFAYQQVKNRLEYQAALESIQRRISQKHMVSWVVS 139
Q ++Y+ K++NI MQLEA +RE Y +VK L+Y A +++I RRI+QKHMV W+ +
Sbjct: 152 GQLMIYDIKKQNIMMQLEASYRENLTTVYTEVKKVLDYHAQIDNIDRRIAQKHMVQWITN 211
Query: 140 HVLKSITPDQDKQSIKKCISDLKALAARA 168
VLK+ITP+Q+K ++ +CI DL++L+A+A
Sbjct: 212 SVLKAITPEQEKANLLQCIKDLESLSAKA 240
>gi|209736920|gb|ACI69329.1| ATP synthase subunit b, mitochondrial precursor [Salmo salar]
Length = 251
Score = 100 bits (250), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 50/105 (47%), Positives = 73/105 (69%)
Query: 61 LASLKGAIENELWNQERSKAQAVLYEAKRENIQMQLEAVFRERALFAYQQVKNRLEYQAA 120
+ SL AI++E Q R++ + +L++AKR N+ M LE RER +VK RL+YQ A
Sbjct: 138 MTSLAQAIQDEKKEQWRAEGRQMLFDAKRNNVAMLLETNRRERVHMVTNEVKKRLDYQIA 197
Query: 121 LESIQRRISQKHMVSWVVSHVLKSITPDQDKQSIKKCISDLKALA 165
L+++ RR+ Q+HMV+WV +V+ +ITP Q+K SI KCI+DLK LA
Sbjct: 198 LQTLHRRMEQEHMVNWVEKNVVTNITPQQEKTSIAKCIADLKVLA 242
>gi|395535633|ref|XP_003769827.1| PREDICTED: ATP synthase subunit b, mitochondrial [Sarcophilus
harrisii]
Length = 242
Score = 100 bits (248), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 67/187 (35%), Positives = 98/187 (52%), Gaps = 23/187 (12%)
Query: 5 FVMQHGKFDTIGPVSLGEPIWVSDMAKCAQVMNRSVV-----LTWVMYQSHRAG------ 53
F + K GP LG + + ++K V+ V L +Y + G
Sbjct: 48 FGFMYPKTGVTGPYVLGTGLILYLLSKEIYVITADTVAAMTTLGLFIYVVKKYGPSIASF 107
Query: 54 --KIRTND-------KLASLKG---AIENELWNQERSKAQAVLYEAKRENIQMQLEAVFR 101
K+R + K ASLKG AIE E Q + L++ +R NI M LE +R
Sbjct: 108 ADKLREDQLGQAEGLKQASLKGISDAIELEKKQQALVAKRHYLFDVQRNNIAMTLEVFYR 167
Query: 102 ERALFAYQQVKNRLEYQAALESIQRRISQKHMVSWVVSHVLKSITPDQDKQSIKKCISDL 161
ER Y +VKNRL+Y A +++ RR Q+HM+SWV +HV+KSI+ ++K++I KCI+DL
Sbjct: 168 ERLHKVYTEVKNRLDYHIAKQNMMRRKEQEHMISWVENHVMKSISAQEEKETITKCIADL 227
Query: 162 KALAARA 168
K LA +A
Sbjct: 228 KVLAKKA 234
>gi|195126299|ref|XP_002007608.1| GI13031 [Drosophila mojavensis]
gi|193919217|gb|EDW18084.1| GI13031 [Drosophila mojavensis]
Length = 245
Score = 100 bits (248), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 57/108 (52%), Positives = 75/108 (69%)
Query: 60 KLASLKGAIENELWNQERSKAQAVLYEAKRENIQMQLEAVFRERALFAYQQVKNRLEYQA 119
+L L AIE E Q R+ +L EAK+ENI +QLEA FRER + Y +VK RL+YQ
Sbjct: 134 ELKVLADAIEAEKKEQWRADGALLLMEAKKENIALQLEAAFRERTMNVYSEVKRRLDYQV 193
Query: 120 ALESIQRRISQKHMVSWVVSHVLKSITPDQDKQSIKKCISDLKALAAR 167
++RR+SQKHMV+W+VS VL SI+P Q+K+++ KCI DL ALA R
Sbjct: 194 ECRHVERRLSQKHMVNWIVSSVLSSISPQQEKETLNKCIGDLTALALR 241
>gi|147904018|ref|NP_001088012.1| uncharacterized protein LOC494703 [Xenopus laevis]
gi|52138953|gb|AAH82702.1| LOC494703 protein [Xenopus laevis]
Length = 250
Score = 99.8 bits (247), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 51/111 (45%), Positives = 74/111 (66%)
Query: 58 NDKLASLKGAIENELWNQERSKAQAVLYEAKRENIQMQLEAVFRERALFAYQQVKNRLEY 117
+ + +L+ AIE E Q R + + L++AKR N+ + LE +RER L Y +VK RL+Y
Sbjct: 136 DSAIKNLERAIEEEKKEQWRVEGRNHLFDAKRNNVTVLLEINYRERLLNVYNEVKKRLDY 195
Query: 118 QAALESIQRRISQKHMVSWVVSHVLKSITPDQDKQSIKKCISDLKALAARA 168
Q AL+ +QRR Q HM++WV +V++SITP Q +SI KCI+DLK L+ A
Sbjct: 196 QVALQHLQRRKEQDHMINWVEKNVVQSITPQQQTESIAKCITDLKLLSKTA 246
>gi|209733968|gb|ACI67853.1| ATP synthase subunit b, mitochondrial precursor [Salmo salar]
Length = 251
Score = 99.4 bits (246), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 50/105 (47%), Positives = 72/105 (68%)
Query: 61 LASLKGAIENELWNQERSKAQAVLYEAKRENIQMQLEAVFRERALFAYQQVKNRLEYQAA 120
+ SL AI++E Q R++ + +L++AKR N+ M LE RER +VK RL+YQ A
Sbjct: 138 MTSLAQAIQDEKKEQWRAEGRQMLFDAKRNNVAMLLETNRRERVHMVTNEVKKRLDYQIA 197
Query: 121 LESIQRRISQKHMVSWVVSHVLKSITPDQDKQSIKKCISDLKALA 165
L+++ RR+ Q+HMV+WV +V+ SITP Q+K SI KCI+ LK LA
Sbjct: 198 LQTLHRRMEQEHMVNWVEKNVVTSITPQQEKASIAKCITGLKVLA 242
>gi|392876140|gb|AFM86902.1| ATP synthase, H+ transporting, mitochondrial Fo complex, subunit B1
[Callorhinchus milii]
gi|392876142|gb|AFM86903.1| ATP synthase, H+ transporting, mitochondrial Fo complex, subunit B1
[Callorhinchus milii]
Length = 249
Score = 99.0 bits (245), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 63/187 (33%), Positives = 97/187 (51%), Gaps = 23/187 (12%)
Query: 5 FVMQHGKFDTIGPVSLGEPIWVSDMAKCAQVMNRSVVLTW-----VMYQSHRAGKIRTN- 58
F + K GP G + V ++K V+N + ++Y GK
Sbjct: 59 FQFLYPKTGVTGPYMFGTGLLVYLLSKEIYVLNYETISGLSVGIVILYAIKTYGKTVAEF 118
Query: 59 -DKLA----------------SLKGAIENELWNQERSKAQAVLYEAKRENIQMQLEAVFR 101
DKL +L +I+NE Q R + + L++AKR N+ M LEA +R
Sbjct: 119 ADKLNMAKVAEIQEVKDATMNNLMQSIDNEKKEQWRVEGRNYLFDAKRNNVTMLLEANYR 178
Query: 102 ERALFAYQQVKNRLEYQAALESIQRRISQKHMVSWVVSHVLKSITPDQDKQSIKKCISDL 161
ER + VK R++YQ L+ +++R+ Q++MV+WV +++S+TP QDK+SI KCISDL
Sbjct: 179 ERIHQVHTGVKKRMDYQIGLQHLKQRLGQEYMVNWVEKSIIQSLTPQQDKESIAKCISDL 238
Query: 162 KALAARA 168
KAL+ A
Sbjct: 239 KALSKTA 245
>gi|392876024|gb|AFM86844.1| ATP synthase, H+ transporting, mitochondrial Fo complex, subunit B1
[Callorhinchus milii]
Length = 249
Score = 98.6 bits (244), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 63/187 (33%), Positives = 97/187 (51%), Gaps = 23/187 (12%)
Query: 5 FVMQHGKFDTIGPVSLGEPIWVSDMAKCAQVMNRSVVLTW-----VMYQSHRAGKIRTN- 58
F + K GP G + V ++K V+N + ++Y GK
Sbjct: 59 FQFLYPKTGVTGPYMFGTGLLVYLLSKEIYVLNYETISGLSVGIVILYAIKTYGKTVAEF 118
Query: 59 -DKLA----------------SLKGAIENELWNQERSKAQAVLYEAKRENIQMQLEAVFR 101
DKL +L +I+NE Q R + + L++AKR N+ M LEA +R
Sbjct: 119 ADKLNMAKVAEIQEVKDATMNNLMQSIDNEKKEQWRVEGRNYLFDAKRNNVTMLLEANYR 178
Query: 102 ERALFAYQQVKNRLEYQAALESIQRRISQKHMVSWVVSHVLKSITPDQDKQSIKKCISDL 161
ER + VK R++YQ L+ +++R+ Q++MV+WV +++S+TP QDK+SI KCISDL
Sbjct: 179 ERIHQVHTGVKKRMDYQIGLQHLKQRLEQEYMVNWVEKSIIQSLTPQQDKESIAKCISDL 238
Query: 162 KALAARA 168
KAL+ A
Sbjct: 239 KALSKTA 245
>gi|392877324|gb|AFM87494.1| ATP synthase, H+ transporting, mitochondrial Fo complex, subunit B1
[Callorhinchus milii]
Length = 249
Score = 98.6 bits (244), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 63/187 (33%), Positives = 97/187 (51%), Gaps = 23/187 (12%)
Query: 5 FVMQHGKFDTIGPVSLGEPIWVSDMAKCAQVMNRSVVLTW-----VMYQSHRAGKIRTN- 58
F + K GP G + V ++K V+N + ++Y GK
Sbjct: 59 FQFLYPKTGVTGPYMFGTGLLVYLLSKEIYVLNYETISGLSVGIVILYAIKTYGKTVAEF 118
Query: 59 -DKLA----------------SLKGAIENELWNQERSKAQAVLYEAKRENIQMQLEAVFR 101
DKL +L +I+NE Q R + + L++AKR N+ M LEA +R
Sbjct: 119 ADKLNMAKVAEIQEVKDATMNNLMQSIDNEKKEQWRVEGRNYLFDAKRNNVTMLLEANYR 178
Query: 102 ERALFAYQQVKNRLEYQAALESIQRRISQKHMVSWVVSHVLKSITPDQDKQSIKKCISDL 161
ER + VK R++YQ L+ +++R+ Q++MV+WV +++S+TP QDK+SI KCISDL
Sbjct: 179 ERIHQVHTGVKKRMDYQIGLQHLKQRLEQEYMVNWVEKSIIQSLTPQQDKESIAKCISDL 238
Query: 162 KALAARA 168
KAL+ A
Sbjct: 239 KALSKTA 245
>gi|392876908|gb|AFM87286.1| ATP synthase, H+ transporting, mitochondrial Fo complex, subunit B1
[Callorhinchus milii]
gi|392877770|gb|AFM87717.1| ATP synthase, H+ transporting, mitochondrial Fo complex, subunit B1
[Callorhinchus milii]
gi|392881094|gb|AFM89379.1| ATP synthase, H+ transporting, mitochondrial Fo complex, subunit B1
[Callorhinchus milii]
gi|392881860|gb|AFM89762.1| ATP synthase, H+ transporting, mitochondrial Fo complex, subunit B1
[Callorhinchus milii]
gi|392882034|gb|AFM89849.1| ATP synthase, H+ transporting, mitochondrial Fo complex, subunit B1
[Callorhinchus milii]
Length = 249
Score = 98.6 bits (244), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 63/187 (33%), Positives = 97/187 (51%), Gaps = 23/187 (12%)
Query: 5 FVMQHGKFDTIGPVSLGEPIWVSDMAKCAQVMNRSVVLTW-----VMYQSHRAGKIRTN- 58
F + K GP G + V ++K V+N + ++Y GK
Sbjct: 59 FQFLYPKTGVTGPYMFGTGLLVYLLSKEIYVLNYETISGLSVGIVILYAIKTYGKTVAEF 118
Query: 59 -DKLA----------------SLKGAIENELWNQERSKAQAVLYEAKRENIQMQLEAVFR 101
DKL +L +I+NE Q R + + L++AKR N+ M LEA +R
Sbjct: 119 ADKLNMAKVAEIQEVKDATMNNLMQSIDNEKKEQWRVEGRNYLFDAKRNNVTMLLEANYR 178
Query: 102 ERALFAYQQVKNRLEYQAALESIQRRISQKHMVSWVVSHVLKSITPDQDKQSIKKCISDL 161
ER + VK R++YQ L+ +++R+ Q++MV+WV +++S+TP QDK+SI KCISDL
Sbjct: 179 ERIHQVHTGVKKRMDYQIGLQHLKQRLEQEYMVNWVEKSIIQSLTPQQDKESIAKCISDL 238
Query: 162 KALAARA 168
KAL+ A
Sbjct: 239 KALSKTA 245
>gi|387914874|gb|AFK11046.1| ATP synthase, H+ transporting, mitochondrial Fo complex, subunit B1
[Callorhinchus milii]
Length = 301
Score = 98.6 bits (244), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 48/108 (44%), Positives = 75/108 (69%)
Query: 61 LASLKGAIENELWNQERSKAQAVLYEAKRENIQMQLEAVFRERALFAYQQVKNRLEYQAA 120
+ +L +I+NE Q R + + L++AKR N+ M LEA +RER + VK R++YQ
Sbjct: 190 MNNLMQSIDNEKKEQWRVEGRNYLFDAKRNNVTMLLEANYRERIHQVHTGVKKRMDYQIG 249
Query: 121 LESIQRRISQKHMVSWVVSHVLKSITPDQDKQSIKKCISDLKALAARA 168
L+ +++R+ Q++MV+WV +++S+TP QDK+SI KCISDLKAL+ A
Sbjct: 250 LQHLKQRLEQEYMVNWVEKSIIQSLTPQQDKESIAKCISDLKALSKTA 297
>gi|291222181|ref|XP_002731093.1| PREDICTED: ATP synthase, H+ transporting, mitochondrial F0 complex,
subunit B1-like [Saccoglossus kowalevskii]
Length = 249
Score = 97.1 bits (240), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 45/111 (40%), Positives = 77/111 (69%)
Query: 58 NDKLASLKGAIENELWNQERSKAQAVLYEAKRENIQMQLEAVFRERALFAYQQVKNRLEY 117
N ++ +L+ +I+ E Q R + +L++A++ENI MQ+E +RER VK +++Y
Sbjct: 139 NAQVDALQQSIDAEKKEQWRLDGRNMLFDARKENIAMQIETAYRERLHTVAADVKKKMDY 198
Query: 118 QAALESIQRRISQKHMVSWVVSHVLKSITPDQDKQSIKKCISDLKALAARA 168
+E+++RR+ Q+HMV W+ +V++SITP Q+K++I +CI DLK L+ARA
Sbjct: 199 HIEVENVKRRVQQEHMVEWIQKNVIQSITPQQEKENIAQCIRDLKTLSARA 249
>gi|392873898|gb|AFM85781.1| ATP synthase, H+ transporting, mitochondrial Fo complex, subunit B1
[Callorhinchus milii]
Length = 249
Score = 97.1 bits (240), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 63/187 (33%), Positives = 96/187 (51%), Gaps = 23/187 (12%)
Query: 5 FVMQHGKFDTIGPVSLGEPIWVSDMAKCAQVMNRSVVLTW-----VMYQSHRAGKIRTN- 58
F + K GP G + V ++K V+N + ++Y GK
Sbjct: 59 FQFLYPKTGVTGPYMFGTGLLVYLLSKEIYVLNYETISGLSVGIVILYAIKTYGKTVAEF 118
Query: 59 -DKLA----------------SLKGAIENELWNQERSKAQAVLYEAKRENIQMQLEAVFR 101
DKL +L +I+NE Q R + + L++AKR N M LEA +R
Sbjct: 119 ADKLNMAKVAEIQEVKDATMNNLMQSIDNEKKEQWRVEGRNYLFDAKRNNATMLLEANYR 178
Query: 102 ERALFAYQQVKNRLEYQAALESIQRRISQKHMVSWVVSHVLKSITPDQDKQSIKKCISDL 161
ER + VK R++YQ L+ +++R+ Q++MV+WV +++S+TP QDK+SI KCISDL
Sbjct: 179 ERIHQVHTGVKKRMDYQIGLQHLKQRLEQEYMVNWVEKSIIQSLTPQQDKESIAKCISDL 238
Query: 162 KALAARA 168
KAL+ A
Sbjct: 239 KALSKTA 245
>gi|47205771|emb|CAF91524.1| unnamed protein product [Tetraodon nigroviridis]
Length = 249
Score = 96.7 bits (239), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 50/106 (47%), Positives = 73/106 (68%), Gaps = 1/106 (0%)
Query: 61 LASLKGAIE-NELWNQERSKAQAVLYEAKRENIQMQLEAVFRERALFAYQQVKNRLEYQA 119
++SL AI +E Q R +++L++AKR N+ M LE +RER +VK RL+YQ
Sbjct: 139 MSSLTQAIRMDEKKEQWRVDGRSMLFDAKRNNVAMLLEINYRERLHMVTNEVKRRLDYQI 198
Query: 120 ALESIQRRISQKHMVSWVVSHVLKSITPDQDKQSIKKCISDLKALA 165
AL+ + RR+ ++HMV+WV V+ SI+P Q+K+SI KCI+DLKALA
Sbjct: 199 ALQDLHRRLEKEHMVNWVEKSVVSSISPQQEKESITKCIADLKALA 244
>gi|432103963|gb|ELK30796.1| ATP synthase subunit b, mitochondrial [Myotis davidii]
Length = 256
Score = 96.3 bits (238), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 51/112 (45%), Positives = 75/112 (66%), Gaps = 3/112 (2%)
Query: 60 KLASLKG---AIENELWNQERSKAQAVLYEAKRENIQMQLEAVFRERALFAYQQVKNRLE 116
K A++KG AIE E Q + + L++ +R NI M LE +RER Y++VKNRL+
Sbjct: 139 KQATMKGIQDAIELEKSQQALVQKRHYLFDVQRNNIAMALEVTYRERLHRVYKEVKNRLD 198
Query: 117 YQAALESIQRRISQKHMVSWVVSHVLKSITPDQDKQSIKKCISDLKALAARA 168
Y +++++ RR Q+HMV WV HV++SI+ Q+K++I KCISDLK LA +A
Sbjct: 199 YHISVQNMMRRKEQEHMVQWVEKHVVQSISAQQEKETIAKCISDLKLLAKKA 250
>gi|402888401|ref|XP_003907551.1| PREDICTED: ATP synthase subunit b, mitochondrial-like isoform 1
[Papio anubis]
gi|402888403|ref|XP_003907552.1| PREDICTED: ATP synthase subunit b, mitochondrial-like isoform 2
[Papio anubis]
Length = 256
Score = 95.9 bits (237), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 44/105 (41%), Positives = 74/105 (70%)
Query: 64 LKGAIENELWNQERSKAQAVLYEAKRENIQMQLEAVFRERALFAYQQVKNRLEYQAALES 123
++ AI+ E Q ++ + L++ +R NI M LE +RER Y++VKNRL+Y A+++
Sbjct: 146 IQNAIDMEKSQQALTQKRHYLFDVQRNNIAMALEVTYRERLYRVYKEVKNRLDYHIAVQN 205
Query: 124 IQRRISQKHMVSWVVSHVLKSITPDQDKQSIKKCISDLKALAARA 168
+ RR Q+HM++WV HV++SI+ +Q+K+++ KCI+DLK LA +A
Sbjct: 206 MTRRKEQEHMINWVEKHVVQSISAEQEKETVAKCIADLKLLAKKA 250
>gi|21361565|ref|NP_001679.2| ATP synthase subunit b, mitochondrial precursor [Homo sapiens]
gi|20455474|sp|P24539.2|AT5F1_HUMAN RecName: Full=ATP synthase subunit b, mitochondrial; Short=ATPase
subunit b; Flags: Precursor
gi|13529203|gb|AAH05366.1| ATP synthase, H+ transporting, mitochondrial F0 complex, subunit B1
[Homo sapiens]
gi|16740997|gb|AAH16350.1| ATP synthase, H+ transporting, mitochondrial F0 complex, subunit B1
[Homo sapiens]
gi|59896134|gb|AAX11428.1| cell proliferation-inducing protein 47 [Homo sapiens]
gi|119576899|gb|EAW56495.1| hCG39985, isoform CRA_a [Homo sapiens]
gi|119576900|gb|EAW56496.1| hCG39985, isoform CRA_a [Homo sapiens]
gi|189069286|dbj|BAG36318.1| unnamed protein product [Homo sapiens]
Length = 256
Score = 95.9 bits (237), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 61/187 (32%), Positives = 99/187 (52%), Gaps = 23/187 (12%)
Query: 5 FVMQHGKFDTIGPVSLGEPIWVSDMAK-----CAQVMNRSVVLTWVMYQSHRAGKI---- 55
F + K GP LG + + ++K A+ VL ++Y + G
Sbjct: 64 FQFLYPKTGVTGPYVLGTGLILYALSKEIYVISAETFTALSVLGVMVYGIKKYGPFVADF 123
Query: 56 --RTND-KLASL-----------KGAIENELWNQERSKAQAVLYEAKRENIQMQLEAVFR 101
+ N+ KLA L + AI+ E Q + + L++ +R NI M LE +R
Sbjct: 124 ADKLNEQKLAQLEEAKQASIQHIQNAIDTEKSQQALVQKRHYLFDVQRNNIAMALEVTYR 183
Query: 102 ERALFAYQQVKNRLEYQAALESIQRRISQKHMVSWVVSHVLKSITPDQDKQSIKKCISDL 161
ER Y++VKNRL+Y +++++ RR Q+HM++WV HV++SI+ Q+K++I KCI+DL
Sbjct: 184 ERLYRVYKEVKNRLDYHISVQNMMRRKEQEHMINWVEKHVVQSISTQQEKETIAKCIADL 243
Query: 162 KALAARA 168
K LA +A
Sbjct: 244 KLLAKKA 250
>gi|392875838|gb|AFM86751.1| ATP synthase, H+ transporting, mitochondrial Fo complex, subunit B1
[Callorhinchus milii]
Length = 249
Score = 95.9 bits (237), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 47/108 (43%), Positives = 74/108 (68%)
Query: 61 LASLKGAIENELWNQERSKAQAVLYEAKRENIQMQLEAVFRERALFAYQQVKNRLEYQAA 120
+ +L +I+NE Q R + + L++AKR N+ M LEA +RER + VK R++YQ
Sbjct: 138 MNNLMQSIDNEKKEQWRVEGRNYLFDAKRNNVTMLLEANYRERIHQVHTGVKKRMDYQIG 197
Query: 121 LESIQRRISQKHMVSWVVSHVLKSITPDQDKQSIKKCISDLKALAARA 168
L+ +++R+ Q++MV+WV +++S+TP QDK+SI KCI DLKAL+ A
Sbjct: 198 LQHLKQRLEQEYMVNWVEKSIIQSLTPQQDKESIAKCIFDLKALSKTA 245
>gi|443734988|gb|ELU18843.1| hypothetical protein CAPTEDRAFT_21700 [Capitella teleta]
Length = 270
Score = 95.9 bits (237), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 44/100 (44%), Positives = 67/100 (67%), Gaps = 3/100 (3%)
Query: 68 IENELWNQERSKAQAVLYEAKRENIQMQLEAVFRERALFAYQQVKNRLEYQAALESIQRR 127
+E +W ++ Q LYEAKRE I +QLEA++R+R A ++K RL+YQ A E+ +
Sbjct: 173 METAIWQED---GQRYLYEAKREGIDLQLEAIYRQRVAEARSEIKKRLDYQLAKETAVKN 229
Query: 128 ISQKHMVSWVVSHVLKSITPDQDKQSIKKCISDLKALAAR 167
+M W++ +V+K ITP+Q+K SI +C+ DLKA+AAR
Sbjct: 230 FEHNYMTRWIIDNVVKGITPEQEKASIAQCLGDLKAIAAR 269
>gi|62897597|dbj|BAD96738.1| ATP synthase, H+ transporting, mitochondrial F0 complex, subunit b
isoform 1 precursor variant [Homo sapiens]
Length = 256
Score = 95.9 bits (237), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 61/187 (32%), Positives = 99/187 (52%), Gaps = 23/187 (12%)
Query: 5 FVMQHGKFDTIGPVSLGEPIWVSDMAK-----CAQVMNRSVVLTWVMYQSHRAGKI---- 55
F + K GP LG + + ++K A+ VL ++Y + G
Sbjct: 64 FQFLYPKTGVTGPYVLGTGLILYALSKEIYVISAETFTALSVLGVMVYGIKKYGPFVADF 123
Query: 56 --RTND-KLASL-----------KGAIENELWNQERSKAQAVLYEAKRENIQMQLEAVFR 101
+ N+ KLA L + AI+ E Q + + L++ +R NI M LE +R
Sbjct: 124 ADKLNEQKLAQLEEAKQASIQHIQNAIDTEKSQQALVQKRHYLFDVQRNNIAMALEVTYR 183
Query: 102 ERALFAYQQVKNRLEYQAALESIQRRISQKHMVSWVVSHVLKSITPDQDKQSIKKCISDL 161
ER Y++VKNRL+Y +++++ RR Q+HM++WV HV++SI+ Q+K++I KCI+DL
Sbjct: 184 ERLYRVYKEVKNRLDYHISVQNMMRRKEQEHMINWVGKHVVQSISTQQEKETIAKCIADL 243
Query: 162 KALAARA 168
K LA +A
Sbjct: 244 KLLAKKA 250
>gi|402855646|ref|XP_003892428.1| PREDICTED: ATP synthase subunit b, mitochondrial [Papio anubis]
Length = 256
Score = 95.9 bits (237), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 44/105 (41%), Positives = 74/105 (70%)
Query: 64 LKGAIENELWNQERSKAQAVLYEAKRENIQMQLEAVFRERALFAYQQVKNRLEYQAALES 123
+ AI+ E Q ++ + L++ +R NI M LE +RER Y++VKNRL+YQ A+++
Sbjct: 146 FQNAIDMEKSQQALTQKRHYLFDVQRNNIAMALEVTYRERLYRVYKEVKNRLDYQIAVQN 205
Query: 124 IQRRISQKHMVSWVVSHVLKSITPDQDKQSIKKCISDLKALAARA 168
+ RR Q+H+++WV HV++SI+ +Q+K+++ KCI+DLK LA +A
Sbjct: 206 MTRRKEQEHVINWVEKHVVQSISAEQEKETVAKCIADLKLLAKKA 250
>gi|509291|emb|CAA42782.1| H+-ATP synthase subunit b [Homo sapiens]
Length = 256
Score = 95.5 bits (236), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 61/187 (32%), Positives = 99/187 (52%), Gaps = 23/187 (12%)
Query: 5 FVMQHGKFDTIGPVSLGEPIWVSDMAK-----CAQVMNRSVVLTWVMYQSHRAGKI---- 55
F + K GP LG + + ++K A+ VL ++Y + G
Sbjct: 64 FQFLYPKTGVTGPYVLGTGLVLYALSKEIYVISAETFTALSVLGVMVYGIKKYGPFVADF 123
Query: 56 --RTND-KLASL-----------KGAIENELWNQERSKAQAVLYEAKRENIQMQLEAVFR 101
+ N+ KLA L + AI+ E Q + + L++ +R NI M LE +R
Sbjct: 124 ADKLNEQKLAQLEEAKQASIQHIQNAIDTEKSQQALVQKRHYLFDVQRNNIAMALEVTYR 183
Query: 102 ERALFAYQQVKNRLEYQAALESIQRRISQKHMVSWVVSHVLKSITPDQDKQSIKKCISDL 161
ER Y++VKNRL+Y +++++ RR Q+HM++WV HV++SI+ Q+K++I KCI+DL
Sbjct: 184 ERLYRVYKEVKNRLDYHISVQNMMRRKEQEHMINWVEKHVVQSISTQQEKETIAKCIADL 243
Query: 162 KALAARA 168
K LA +A
Sbjct: 244 KLLAKKA 250
>gi|387016867|gb|AFJ50552.1| ATP synthase subunit b, mitochondrial-like isoform [Crotalus
adamanteus]
Length = 255
Score = 95.5 bits (236), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 49/102 (48%), Positives = 70/102 (68%)
Query: 67 AIENELWNQERSKAQAVLYEAKRENIQMQLEAVFRERALFAYQQVKNRLEYQAALESIQR 126
IE E Q R + + L++AKR NI M LEA +RER L A ++VK RL+YQ AL+ ++R
Sbjct: 150 GIEEEKKEQWRLQGRHYLFDAKRNNIAMILEANYRERLLIASREVKKRLDYQVALQQLKR 209
Query: 127 RISQKHMVSWVVSHVLKSITPDQDKQSIKKCISDLKALAARA 168
R+ + HM++WV V +S+T Q+K+SI KC+ DLKAL+ A
Sbjct: 210 RLERDHMINWVEQSVWQSVTAQQEKESIAKCLLDLKALSKSA 251
>gi|387542472|gb|AFJ71863.1| ATP synthase subunit b, mitochondrial precursor [Macaca mulatta]
Length = 256
Score = 95.1 bits (235), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 43/105 (40%), Positives = 74/105 (70%)
Query: 64 LKGAIENELWNQERSKAQAVLYEAKRENIQMQLEAVFRERALFAYQQVKNRLEYQAALES 123
++ AI+ E Q ++ + L++ +R NI M LE +RER Y++VK+RL+Y A+++
Sbjct: 146 MQNAIDTEKSQQALTQKRHYLFDVQRNNIAMALEVTYRERLYRVYKEVKSRLDYHIAVQN 205
Query: 124 IQRRISQKHMVSWVVSHVLKSITPDQDKQSIKKCISDLKALAARA 168
+ RR Q+HM++WV HV++SI+ +Q+K+++ KCI+DLK LA +A
Sbjct: 206 MTRRKEQEHMINWVEKHVVQSISTEQEKETVAKCIADLKLLAKKA 250
>gi|386781324|ref|NP_001247608.1| ATP synthase, H+ transporting, mitochondrial Fo complex, subunit B1
[Macaca mulatta]
gi|67970461|dbj|BAE01573.1| unnamed protein product [Macaca fascicularis]
gi|380813574|gb|AFE78661.1| ATP synthase subunit b, mitochondrial precursor [Macaca mulatta]
gi|383419007|gb|AFH32717.1| ATP synthase subunit b, mitochondrial precursor [Macaca mulatta]
gi|384942610|gb|AFI34910.1| ATP synthase subunit b, mitochondrial precursor [Macaca mulatta]
Length = 256
Score = 95.1 bits (235), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 43/105 (40%), Positives = 74/105 (70%)
Query: 64 LKGAIENELWNQERSKAQAVLYEAKRENIQMQLEAVFRERALFAYQQVKNRLEYQAALES 123
++ AI+ E Q ++ + L++ +R NI M LE +RER Y++VK+RL+Y A+++
Sbjct: 146 MQNAIDTEKSQQALTQKRHYLFDVQRNNIAMALEVTYRERLYRVYKEVKSRLDYHIAVQN 205
Query: 124 IQRRISQKHMVSWVVSHVLKSITPDQDKQSIKKCISDLKALAARA 168
+ RR Q+HM++WV HV++SI+ +Q+K+++ KCI+DLK LA +A
Sbjct: 206 MTRRKEQEHMINWVEKHVVQSISAEQEKETVAKCIADLKLLAKKA 250
>gi|55587708|ref|XP_513639.1| PREDICTED: ATP synthase subunit b, mitochondrial isoform 2 [Pan
troglodytes]
gi|397478809|ref|XP_003810729.1| PREDICTED: ATP synthase subunit b, mitochondrial [Pan paniscus]
gi|397508051|ref|XP_003824488.1| PREDICTED: ATP synthase subunit b, mitochondrial-like [Pan
paniscus]
gi|410214216|gb|JAA04327.1| ATP synthase, H+ transporting, mitochondrial Fo complex, subunit B1
[Pan troglodytes]
gi|410247378|gb|JAA11656.1| ATP synthase, H+ transporting, mitochondrial Fo complex, subunit B1
[Pan troglodytes]
gi|410308576|gb|JAA32888.1| ATP synthase, H+ transporting, mitochondrial Fo complex, subunit B1
[Pan troglodytes]
gi|410351271|gb|JAA42239.1| ATP synthase, H+ transporting, mitochondrial Fo complex, subunit B1
[Pan troglodytes]
Length = 256
Score = 94.7 bits (234), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 61/187 (32%), Positives = 99/187 (52%), Gaps = 23/187 (12%)
Query: 5 FVMQHGKFDTIGPVSLGEPIWVSDMAK-----CAQVMNRSVVLTWVMYQSHRAGKI---- 55
F + K GP LG + + ++K A+ VL ++Y + G
Sbjct: 64 FQFLYPKTGVTGPYVLGTGLILYALSKEIYVISAETFTALSVLGVMVYGIKKYGPFVADF 123
Query: 56 --RTND-KLASL-----------KGAIENELWNQERSKAQAVLYEAKRENIQMQLEAVFR 101
+ N+ KLA L + AI+ E Q + + L++ +R NI M LE +R
Sbjct: 124 ADKLNEQKLAQLEEAKQASIQHIQNAIDMEKSQQALVQKRHYLFDVQRNNIAMALEVTYR 183
Query: 102 ERALFAYQQVKNRLEYQAALESIQRRISQKHMVSWVVSHVLKSITPDQDKQSIKKCISDL 161
ER Y++VKNRL+Y +++++ RR Q+HM++WV HV++SI+ Q+K++I KCI+DL
Sbjct: 184 ERLYRVYKEVKNRLDYHISVQNMMRRKEQEHMINWVEKHVVQSISTQQEKETIAKCIADL 243
Query: 162 KALAARA 168
K LA +A
Sbjct: 244 KLLAKKA 250
>gi|13543618|gb|AAH05960.1| ATP synthase, H+ transporting, mitochondrial F0 complex, subunit B1
[Homo sapiens]
Length = 256
Score = 94.7 bits (234), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 60/187 (32%), Positives = 100/187 (53%), Gaps = 23/187 (12%)
Query: 5 FVMQHGKFDTIGPVSLGEPIWVSDMAKCAQVMNRSV-----VLTWVMYQSHRAGKI---- 55
F + K GP LG + + ++K V++ VL ++Y + G
Sbjct: 64 FQFLYPKTGVTGPYVLGTGLILYALSKGIYVISAETFTALSVLGVMVYGIKKYGPFVADF 123
Query: 56 --RTND-KLASL-----------KGAIENELWNQERSKAQAVLYEAKRENIQMQLEAVFR 101
+ N+ KLA L + AI+ E Q + + L++ +R NI M LE +R
Sbjct: 124 ADKLNEQKLAQLEEAKQASIQHIQNAIDTEKSQQALVQKRHYLFDVQRNNIAMALEVTYR 183
Query: 102 ERALFAYQQVKNRLEYQAALESIQRRISQKHMVSWVVSHVLKSITPDQDKQSIKKCISDL 161
ER Y++V+NRL+Y +++++ RR Q+HM++WV HV++SI+ Q+K++I KCI+DL
Sbjct: 184 ERLYRVYKEVRNRLDYHISVQNMMRRKEQEHMINWVEKHVVQSISTQQEKETIAKCIADL 243
Query: 162 KALAARA 168
K LA +A
Sbjct: 244 KLLAKKA 250
>gi|443695918|gb|ELT96717.1| hypothetical protein CAPTEDRAFT_162881 [Capitella teleta]
Length = 127
Score = 94.7 bits (234), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 44/100 (44%), Positives = 67/100 (67%), Gaps = 3/100 (3%)
Query: 68 IENELWNQERSKAQAVLYEAKRENIQMQLEAVFRERALFAYQQVKNRLEYQAALESIQRR 127
+E +W ++ Q LYEAKRE I +QLEA++R+R A ++K RL+YQ A E+ +
Sbjct: 30 METAIWQED---GQRYLYEAKREGIDLQLEAIYRQRVAEARSEIKKRLDYQLAKETAVKN 86
Query: 128 ISQKHMVSWVVSHVLKSITPDQDKQSIKKCISDLKALAAR 167
+M W++ +V+K ITP+Q+K SI +C+ DLKA+AAR
Sbjct: 87 FEHNYMTRWIIDNVVKGITPEQEKASIAQCLGDLKAIAAR 126
>gi|426330792|ref|XP_004026390.1| PREDICTED: ATP synthase subunit b, mitochondrial [Gorilla gorilla
gorilla]
Length = 256
Score = 94.4 bits (233), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 61/187 (32%), Positives = 99/187 (52%), Gaps = 23/187 (12%)
Query: 5 FVMQHGKFDTIGPVSLGEPIWVSDMAK-----CAQVMNRSVVLTWVMYQSHRAGKI---- 55
F + K GP LG + + ++K A+ VL ++Y + G
Sbjct: 64 FQFLYPKTGVTGPYVLGTGLILYALSKEIYVISAETFTALSVLGVMVYGIKKYGPFVADF 123
Query: 56 --RTND-KLASL-----------KGAIENELWNQERSKAQAVLYEAKRENIQMQLEAVFR 101
+ N+ KLA L + AI+ E Q + + L++ +R NI M LE +R
Sbjct: 124 ADKLNEQKLAQLEEAKQASIQHIQNAIDMEKSQQALVQKRHYLFDVQRNNIAMALEVTYR 183
Query: 102 ERALFAYQQVKNRLEYQAALESIQRRISQKHMVSWVVSHVLKSITPDQDKQSIKKCISDL 161
ER Y++VKNRL+Y +++++ RR Q+HM++WV HV++SI+ Q+K++I KCI+DL
Sbjct: 184 ERLYRVYKEVKNRLDYHISVQNMMRRKEQEHMINWVEKHVVQSISTQQEKETIAKCIADL 243
Query: 162 KALAARA 168
K LA +A
Sbjct: 244 KLLAKKA 250
>gi|126311587|ref|XP_001382002.1| PREDICTED: ATP synthase subunit b, mitochondrial-like [Monodelphis
domestica]
Length = 258
Score = 94.0 bits (232), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 62/188 (32%), Positives = 97/188 (51%), Gaps = 25/188 (13%)
Query: 5 FVMQHGKFDTIGPVSLGEPIWVSDMAKCAQVMNRSV-----VLTWVMYQSHRAG------ 53
F + K GP LG + + ++K V+ L +Y + G
Sbjct: 64 FEFMYPKTGVTGPYVLGTGLALYLLSKEIYVITADTFAAMSTLGLFVYIVKKYGASVAAF 123
Query: 54 --KIRTNDKLASLKG-----------AIENELWNQERSKAQAVLYEAKRENIQMQLEAVF 100
K+R D+LA +G AI+ E Q+ + L++ +R NI M +E +
Sbjct: 124 ADKLR-EDQLAEAEGLKQTSMKNIQDAIDLEKQQQDLVGKRHYLFDVQRNNIAMTIELFY 182
Query: 101 RERALFAYQQVKNRLEYQAALESIQRRISQKHMVSWVVSHVLKSITPDQDKQSIKKCISD 160
RER Y +VKNRL+Y A +++ RR Q+HM++WV +HV+KSI+ Q+K++I KCI+D
Sbjct: 183 RERLHKVYTEVKNRLDYHIAKQNMMRRKEQEHMITWVENHVVKSISAQQEKETIAKCIAD 242
Query: 161 LKALAARA 168
LK LA +A
Sbjct: 243 LKVLAKKA 250
>gi|355558271|gb|EHH15051.1| hypothetical protein EGK_01088 [Macaca mulatta]
Length = 256
Score = 94.0 bits (232), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 43/105 (40%), Positives = 74/105 (70%)
Query: 64 LKGAIENELWNQERSKAQAVLYEAKRENIQMQLEAVFRERALFAYQQVKNRLEYQAALES 123
++ AI+ E Q ++ + L++ +R NI M LE +RER Y++VK+RL+Y A+++
Sbjct: 146 IQNAIDMEKSQQALTQKRHYLFDVQRNNIAMALEVTYRERLYRVYKEVKSRLDYHIAVQN 205
Query: 124 IQRRISQKHMVSWVVSHVLKSITPDQDKQSIKKCISDLKALAARA 168
+ RR Q+HM++WV HV++SI+ +Q+K+++ KCI+DLK LA +A
Sbjct: 206 MTRRKEQEHMINWVEKHVVQSISAEQEKETVAKCIADLKLLAKKA 250
>gi|158255590|dbj|BAF83766.1| unnamed protein product [Homo sapiens]
Length = 256
Score = 94.0 bits (232), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 60/187 (32%), Positives = 98/187 (52%), Gaps = 23/187 (12%)
Query: 5 FVMQHGKFDTIGPVSLGEPIWVSDMAK-----CAQVMNRSVVLTWVMYQSHRAGKI---- 55
F + K GP LG + + ++K A+ VL ++Y + G
Sbjct: 64 FQFLYPKTGVTGPYVLGTGLILYALSKEIYVISAETFTALSVLGVMVYGIKKYGPFVADF 123
Query: 56 --RTND-KLASL-----------KGAIENELWNQERSKAQAVLYEAKRENIQMQLEAVFR 101
+ N+ KLA L + AI+ E Q + + L++ +R NI M LE +R
Sbjct: 124 ADKLNEQKLAQLEEAKQASIQHIQNAIDTEKSQQALVQKRHYLFDVQRNNIAMALEVTYR 183
Query: 102 ERALFAYQQVKNRLEYQAALESIQRRISQKHMVSWVVSHVLKSITPDQDKQSIKKCISDL 161
ER Y++ KNRL+Y +++++ RR Q+HM++WV HV++SI+ Q+K++I KCI+DL
Sbjct: 184 ERLYRVYKEAKNRLDYHISVQNMMRRKEQEHMINWVEKHVVQSISTQQEKETIAKCIADL 243
Query: 162 KALAARA 168
K LA +A
Sbjct: 244 KLLAKKA 250
>gi|380014157|ref|XP_003691106.1| PREDICTED: ATP synthase subunit b, mitochondrial-like [Apis florea]
Length = 239
Score = 94.0 bits (232), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 46/98 (46%), Positives = 68/98 (69%), Gaps = 3/98 (3%)
Query: 68 IENELWNQERSKAQAVLYEAKRENIQMQLEAVFRERALFAYQQVKNRLEYQAALESIQRR 127
+E E W R Q +LY+ K++NI MQLEA +RE + QV+ L+Y A ++ I RR
Sbjct: 143 LEKEKW---RVDGQLMLYDVKKQNIWMQLEANYRENLATIHSQVRRILDYHAQIDIINRR 199
Query: 128 ISQKHMVSWVVSHVLKSITPDQDKQSIKKCISDLKALA 165
ISQKHM+ W+++ VL SITP+Q+K ++ +CI DL+AL+
Sbjct: 200 ISQKHMMQWIINSVLASITPEQEKANLLQCIKDLEALS 237
>gi|109075778|ref|XP_001093831.1| PREDICTED: ATP synthase subunit b, mitochondrial [Macaca mulatta]
Length = 256
Score = 94.0 bits (232), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 43/105 (40%), Positives = 74/105 (70%)
Query: 64 LKGAIENELWNQERSKAQAVLYEAKRENIQMQLEAVFRERALFAYQQVKNRLEYQAALES 123
++ AI+ E Q ++ + L++ +R NI M LE +RER Y++VK+RL+Y A+++
Sbjct: 146 IQNAIDMEKSQQALTQKRHYLFDVQRNNIAMALEVTYRERLYRVYKEVKSRLDYHIAVQN 205
Query: 124 IQRRISQKHMVSWVVSHVLKSITPDQDKQSIKKCISDLKALAARA 168
+ RR Q+HM++WV HV++SI+ +Q+K+++ KCI+DLK LA +A
Sbjct: 206 MTRRKEQEHMINWVEKHVVQSISAEQEKETVAKCIADLKLLAKKA 250
>gi|355745532|gb|EHH50157.1| hypothetical protein EGM_00939 [Macaca fascicularis]
Length = 256
Score = 94.0 bits (232), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 43/105 (40%), Positives = 74/105 (70%)
Query: 64 LKGAIENELWNQERSKAQAVLYEAKRENIQMQLEAVFRERALFAYQQVKNRLEYQAALES 123
++ AI+ E Q ++ + L++ +R NI M LE +RER Y++VK+RL+Y A+++
Sbjct: 146 IQNAIDMEKSQQALTQKRHYLFDVQRNNIAMALEVTYRERLYRVYKEVKSRLDYHIAVQN 205
Query: 124 IQRRISQKHMVSWVVSHVLKSITPDQDKQSIKKCISDLKALAARA 168
+ RR Q+HM++WV HV++SI+ +Q+K+++ KCI+DLK LA +A
Sbjct: 206 MTRRKEQEHMINWVEKHVVQSISAEQEKETVAKCIADLKLLAKKA 250
>gi|194210990|ref|XP_001917964.1| PREDICTED: ATP synthase subunit b, mitochondrial-like [Equus
caballus]
Length = 256
Score = 93.6 bits (231), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 46/105 (43%), Positives = 73/105 (69%)
Query: 64 LKGAIENELWNQERSKAQAVLYEAKRENIQMQLEAVFRERALFAYQQVKNRLEYQAALES 123
++ AI+ E Q + + L++ +R NI M LE +RER Y++VKNRL+YQ ++++
Sbjct: 146 IQDAIDLEKSQQALVQKRHYLFDVQRNNIAMALELTYRERLHRVYKEVKNRLDYQISVQN 205
Query: 124 IQRRISQKHMVSWVVSHVLKSITPDQDKQSIKKCISDLKALAARA 168
+ RR Q+HMV+WV HV++S++ Q+K++I KCISDLK LA +A
Sbjct: 206 MMRRKEQEHMVNWVEKHVVQSLSTQQEKETIAKCISDLKLLAKKA 250
>gi|72041872|ref|XP_784941.1| PREDICTED: ATP synthase subunit b, mitochondrial-like
[Strongylocentrotus purpuratus]
Length = 249
Score = 93.2 bits (230), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 47/111 (42%), Positives = 72/111 (64%)
Query: 58 NDKLASLKGAIENELWNQERSKAQAVLYEAKRENIQMQLEAVFRERALFAYQQVKNRLEY 117
N +A+ K AIE+E Q R + L++A+REN+ M++E +RER Q V+ +++Y
Sbjct: 139 NANIAAYKDAIEHEKTEQWRLDGRKQLFDARRENVAMRMEIEYRERLQQVAQAVQKKMDY 198
Query: 118 QAALESIQRRISQKHMVSWVVSHVLKSITPDQDKQSIKKCISDLKALAARA 168
LE+ +RR+ Q+HMV W+ +V+KSITP Q+K + CIS+LK LA A
Sbjct: 199 HVELENTKRRLEQQHMVRWIEQNVVKSITPQQEKDIMSTCISNLKNLAPTA 249
>gi|321462613|gb|EFX73635.1| hypothetical protein DAPPUDRAFT_231350 [Daphnia pulex]
Length = 256
Score = 92.8 bits (229), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 40/105 (38%), Positives = 73/105 (69%)
Query: 61 LASLKGAIENELWNQERSKAQAVLYEAKRENIQMQLEAVFRERALFAYQQVKNRLEYQAA 120
+A K I E Q+R+ +L++AKREN+ +QLEA +RE+ + + + K RL+YQ
Sbjct: 145 IAEAKARIAAEKIEQDRALGMKMLFDAKRENVALQLEAAYREQLVKVFSETKKRLDYQVE 204
Query: 121 LESIQRRISQKHMVSWVVSHVLKSITPDQDKQSIKKCISDLKALA 165
++++QR + Q+H+V WV+ V ++TP+Q+K ++ +CI+++K+LA
Sbjct: 205 VQNVQRNLEQRHVVDWVLRSVRAAVTPEQEKATLSQCIANIKSLA 249
>gi|345323943|ref|XP_001508128.2| PREDICTED: ATP synthase subunit b, mitochondrial-like
[Ornithorhynchus anatinus]
Length = 268
Score = 92.4 bits (228), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 45/105 (42%), Positives = 70/105 (66%)
Query: 64 LKGAIENELWNQERSKAQAVLYEAKRENIQMQLEAVFRERALFAYQQVKNRLEYQAALES 123
++ AIE E Q + L++ +R NI M LE +RER Y +VKNRL+YQ ++++
Sbjct: 158 IQDAIEVEKAQQALVGKRHYLFDVQRNNIAMTLEVYYRERLHRVYTEVKNRLDYQISMQN 217
Query: 124 IQRRISQKHMVSWVVSHVLKSITPDQDKQSIKKCISDLKALAARA 168
+ RR Q HM++WV HV++SI+ Q+K++I +CI+DLK LA +A
Sbjct: 218 MMRRKEQDHMINWVEKHVVQSISAQQEKETIAQCIADLKLLAKKA 262
>gi|73959885|ref|XP_537027.2| PREDICTED: ATP synthase subunit b, mitochondrial [Canis lupus
familiaris]
Length = 256
Score = 92.4 bits (228), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 44/105 (41%), Positives = 72/105 (68%)
Query: 64 LKGAIENELWNQERSKAQAVLYEAKRENIQMQLEAVFRERALFAYQQVKNRLEYQAALES 123
++ AI+ E Q + + L++ +R NI M LE +RER Y++VKNRL+Y ++++
Sbjct: 146 IQDAIDTEKSQQALVQKRHYLFDVQRNNIAMALELTYRERLHRVYREVKNRLDYHISVQN 205
Query: 124 IQRRISQKHMVSWVVSHVLKSITPDQDKQSIKKCISDLKALAARA 168
+ RR Q+HM++WV HV++SI+ Q+K++I KCI+DLK LA +A
Sbjct: 206 MMRRKEQEHMINWVEKHVVQSISAQQEKETIAKCIADLKLLAKKA 250
>gi|291397184|ref|XP_002715017.1| PREDICTED: ATP synthase, H+ transporting, mitochondrial F0 complex,
subunit B1-like isoform 2 [Oryctolagus cuniculus]
Length = 255
Score = 92.0 bits (227), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 44/105 (41%), Positives = 72/105 (68%)
Query: 64 LKGAIENELWNQERSKAQAVLYEAKRENIQMQLEAVFRERALFAYQQVKNRLEYQAALES 123
++ AIE E Q + + L++ +R NI M LE +RER Y++VKNRL+Y ++++
Sbjct: 145 IQNAIEQEKSQQALVQKRHYLFDVQRNNIAMALELTYRERLHRVYKEVKNRLDYHISVQN 204
Query: 124 IQRRISQKHMVSWVVSHVLKSITPDQDKQSIKKCISDLKALAARA 168
+ +R Q+HM++WV HV++SI+ Q+K++I KCI+DLK LA +A
Sbjct: 205 MMQRKEQEHMINWVEKHVVQSISAQQEKETIAKCIADLKLLAKKA 249
>gi|291397182|ref|XP_002715016.1| PREDICTED: ATP synthase, H+ transporting, mitochondrial F0 complex,
subunit B1-like isoform 1 [Oryctolagus cuniculus]
Length = 255
Score = 92.0 bits (227), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 44/105 (41%), Positives = 72/105 (68%)
Query: 64 LKGAIENELWNQERSKAQAVLYEAKRENIQMQLEAVFRERALFAYQQVKNRLEYQAALES 123
++ AIE E Q + + L++ +R NI M LE +RER Y++VKNRL+Y ++++
Sbjct: 145 IQNAIEQEKSQQALVQKRHYLFDVQRNNIAMALELTYRERLHRVYKEVKNRLDYHISVQN 204
Query: 124 IQRRISQKHMVSWVVSHVLKSITPDQDKQSIKKCISDLKALAARA 168
+ +R Q+HM++WV HV++SI+ Q+K++I KCI+DLK LA +A
Sbjct: 205 MMQRKEQEHMINWVEKHVVQSISAQQEKETIAKCIADLKLLAKKA 249
>gi|291398273|ref|XP_002715822.1| PREDICTED: ATP synthase, H+ transporting, mitochondrial F0 complex,
subunit B1-like [Oryctolagus cuniculus]
Length = 256
Score = 92.0 bits (227), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 44/105 (41%), Positives = 72/105 (68%)
Query: 64 LKGAIENELWNQERSKAQAVLYEAKRENIQMQLEAVFRERALFAYQQVKNRLEYQAALES 123
++ AIE E Q + + L++ +R NI M LE +RER Y++VKNRL+Y ++++
Sbjct: 146 IQNAIEQEKSQQALVQKRHYLFDVQRNNIAMALELTYRERLHRVYKEVKNRLDYHISVQN 205
Query: 124 IQRRISQKHMVSWVVSHVLKSITPDQDKQSIKKCISDLKALAARA 168
+ +R Q+HM++WV HV++SI+ Q+K++I KCI+DLK LA +A
Sbjct: 206 MMQRKEQEHMINWVEKHVVQSISAQQEKETIAKCIADLKLLAKKA 250
>gi|332237639|ref|XP_003268013.1| PREDICTED: ATP synthase subunit b, mitochondrial [Nomascus
leucogenys]
Length = 256
Score = 92.0 bits (227), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 43/105 (40%), Positives = 73/105 (69%)
Query: 64 LKGAIENELWNQERSKAQAVLYEAKRENIQMQLEAVFRERALFAYQQVKNRLEYQAALES 123
++ AI+ E Q ++ + L++ +R NI M LE +RER Y++VKNRL+Y ++++
Sbjct: 146 IQNAIDMEKSQQALAQKRHYLFDVQRNNIAMALEITYRERLYRVYKEVKNRLDYHISVQN 205
Query: 124 IQRRISQKHMVSWVVSHVLKSITPDQDKQSIKKCISDLKALAARA 168
+ R+ Q+HM++WV HV++SI+ Q+K++I KCI+DLK LA +A
Sbjct: 206 MMRQKEQEHMINWVEKHVVQSISTQQEKETIAKCIADLKLLAKKA 250
>gi|403284279|ref|XP_003933505.1| PREDICTED: ATP synthase subunit b, mitochondrial [Saimiri
boliviensis boliviensis]
Length = 256
Score = 91.3 bits (225), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 42/105 (40%), Positives = 71/105 (67%)
Query: 64 LKGAIENELWNQERSKAQAVLYEAKRENIQMQLEAVFRERALFAYQQVKNRLEYQAALES 123
+ AI+ E Q + + L++ +R NI + +E +RER Y++VKNRL+Y ++++
Sbjct: 146 FQDAIDTEKAQQALVQKRHYLFDVQRNNIALAMEVTYRERLHTVYKEVKNRLDYHISVQN 205
Query: 124 IQRRISQKHMVSWVVSHVLKSITPDQDKQSIKKCISDLKALAARA 168
+ RR Q+HM++WV HV++SI+ Q+K++I KCI+DLK LA +A
Sbjct: 206 MMRRKEQEHMINWVEKHVVQSISAQQEKETIAKCIADLKLLAKKA 250
>gi|410968032|ref|XP_003990517.1| PREDICTED: ATP synthase subunit b, mitochondrial [Felis catus]
Length = 264
Score = 91.3 bits (225), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 44/105 (41%), Positives = 72/105 (68%)
Query: 64 LKGAIENELWNQERSKAQAVLYEAKRENIQMQLEAVFRERALFAYQQVKNRLEYQAALES 123
++ AI+ E Q + + L++ +R NI M LE +RER Y++VKNRL+Y ++++
Sbjct: 154 IQDAIDMEKSQQALVQKRHYLFDVQRNNIAMALELTYRERLHRVYKEVKNRLDYHISVQN 213
Query: 124 IQRRISQKHMVSWVVSHVLKSITPDQDKQSIKKCISDLKALAARA 168
+ RR Q+HM++WV HV++SI+ Q+K++I KCI+DLK LA +A
Sbjct: 214 MMRRKEQEHMINWVEKHVVQSISAQQEKETIAKCIADLKLLAKKA 258
>gi|74225997|dbj|BAE28757.1| unnamed protein product [Mus musculus]
Length = 256
Score = 91.3 bits (225), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 44/105 (41%), Positives = 71/105 (67%)
Query: 64 LKGAIENELWNQERSKAQAVLYEAKRENIQMQLEAVFRERALFAYQQVKNRLEYQAALES 123
++ AI+ E Q + + L++ +R NI + LE +RER AY++VKNRL+Y ++++
Sbjct: 146 IQDAIDMEKAQQALVQKRHYLFDVQRNNIALALEVTYRERLHKAYKEVKNRLDYHISVQN 205
Query: 124 IQRRISQKHMVSWVVSHVLKSITPDQDKQSIKKCISDLKALAARA 168
+ RR ++HM+ WV HV+KSI+ Q+K++I KCI DLK LA +A
Sbjct: 206 MMRRKEEEHMIDWVEKHVVKSISVQQEKETIAKCIEDLKLLAKKA 250
>gi|74195489|dbj|BAE39561.1| unnamed protein product [Mus musculus]
Length = 256
Score = 91.3 bits (225), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 44/105 (41%), Positives = 71/105 (67%)
Query: 64 LKGAIENELWNQERSKAQAVLYEAKRENIQMQLEAVFRERALFAYQQVKNRLEYQAALES 123
++ AI+ E Q + + L++ +R NI + LE +RER AY++VKNRL+Y ++++
Sbjct: 146 IQDAIDMEKAQQALVQKRHYLFDVQRNNIALALEVTYRERLHKAYKEVKNRLDYHISVQN 205
Query: 124 IQRRISQKHMVSWVVSHVLKSITPDQDKQSIKKCISDLKALAARA 168
+ RR ++HM+ WV HV+KSI+ Q+K++I KCI DLK LA +A
Sbjct: 206 MMRRKEEEHMIDWVEKHVVKSISVQQEKETIAKCIEDLKLLAKKA 250
>gi|78214312|ref|NP_033855.2| ATP synthase subunit b, mitochondrial precursor [Mus musculus]
gi|20454828|sp|Q9CQQ7.1|AT5F1_MOUSE RecName: Full=ATP synthase subunit b, mitochondrial; Short=ATPase
subunit b; Flags: Precursor
gi|12833323|dbj|BAB22481.1| unnamed protein product [Mus musculus]
gi|12847355|dbj|BAB27538.1| unnamed protein product [Mus musculus]
gi|56971083|gb|AAH87882.1| ATP synthase, H+ transporting, mitochondrial F0 complex, subunit b,
isoform 1 [Mus musculus]
gi|59809077|gb|AAH89574.1| ATP synthase, H+ transporting, mitochondrial F0 complex, subunit b,
isoform 1 [Mus musculus]
gi|74139558|dbj|BAE40916.1| unnamed protein product [Mus musculus]
gi|74177296|dbj|BAE34561.1| unnamed protein product [Mus musculus]
gi|74189730|dbj|BAE36847.1| unnamed protein product [Mus musculus]
gi|74198386|dbj|BAE39677.1| unnamed protein product [Mus musculus]
gi|74207522|dbj|BAE40013.1| unnamed protein product [Mus musculus]
gi|74207545|dbj|BAE40023.1| unnamed protein product [Mus musculus]
gi|74217131|dbj|BAE40459.1| unnamed protein product [Mus musculus]
gi|148675590|gb|EDL07537.1| ATP synthase, H+ transporting, mitochondrial F0 complex, subunit b,
isoform 1, isoform CRA_a [Mus musculus]
Length = 256
Score = 91.3 bits (225), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 44/105 (41%), Positives = 71/105 (67%)
Query: 64 LKGAIENELWNQERSKAQAVLYEAKRENIQMQLEAVFRERALFAYQQVKNRLEYQAALES 123
++ AI+ E Q + + L++ +R NI + LE +RER AY++VKNRL+Y ++++
Sbjct: 146 IQDAIDMEKAQQALVQKRHYLFDVQRNNIALALEVTYRERLHKAYKEVKNRLDYHISVQN 205
Query: 124 IQRRISQKHMVSWVVSHVLKSITPDQDKQSIKKCISDLKALAARA 168
+ RR ++HM+ WV HV+KSI+ Q+K++I KCI DLK LA +A
Sbjct: 206 MMRRKEEEHMIDWVEKHVVKSISVQQEKETIAKCIEDLKLLAKKA 250
>gi|444724659|gb|ELW65258.1| ATP synthase subunit b, mitochondrial [Tupaia chinensis]
Length = 255
Score = 91.3 bits (225), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 44/110 (40%), Positives = 73/110 (66%)
Query: 59 DKLASLKGAIENELWNQERSKAQAVLYEAKRENIQMQLEAVFRERALFAYQQVKNRLEYQ 118
D + ++ AI+ E Q + + L++ +R NI M LE +RER Y++VKNRL+Y
Sbjct: 140 DTIQQIQDAIDLEKLQQALVQKRHYLFDVQRNNIAMALEVTYRERLHKVYKEVKNRLDYH 199
Query: 119 AALESIQRRISQKHMVSWVVSHVLKSITPDQDKQSIKKCISDLKALAARA 168
+++++ R Q+HM++WV HV++SI+ Q+K++I KCI+DLK LA +A
Sbjct: 200 ISVQNMMVRKEQEHMINWVEKHVVQSISAQQEKETIAKCIADLKLLAKKA 249
>gi|297494028|gb|ADI40736.1| mitochondrial H+-transporting ATP synthase F0 complex subunit B1
[Rousettus leschenaultii]
Length = 199
Score = 91.3 bits (225), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 44/108 (40%), Positives = 72/108 (66%)
Query: 61 LASLKGAIENELWNQERSKAQAVLYEAKRENIQMQLEAVFRERALFAYQQVKNRLEYQAA 120
+ S++ AI+ E Q + + L++ +R NI M LE +RER Y++VK RL+Y +
Sbjct: 90 IKSIQDAIDMEKSQQALVQKRHYLFDVQRNNIAMALEVTYRERLHRVYKEVKGRLDYHIS 149
Query: 121 LESIQRRISQKHMVSWVVSHVLKSITPDQDKQSIKKCISDLKALAARA 168
++ + RR Q+HM++WV HV++SI+ Q+K++I KCI+DLK LA +A
Sbjct: 150 VQDMMRRKEQEHMINWVEKHVVQSISAQQEKETIAKCIADLKLLAKKA 197
>gi|417397936|gb|JAA46001.1| Putative mitochondrial f1f0-atp synthase subunit b/atp4 [Desmodus
rotundus]
Length = 256
Score = 90.9 bits (224), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 48/112 (42%), Positives = 75/112 (66%), Gaps = 3/112 (2%)
Query: 60 KLASLKG---AIENELWNQERSKAQAVLYEAKRENIQMQLEAVFRERALFAYQQVKNRLE 116
K AS+KG AI+ E Q + + L++ +R NI M LE +RER Y++VK+RL+
Sbjct: 139 KQASIKGIQDAIDLEKSQQALVEKRHYLFDVQRNNIAMALEVTYRERLHRVYREVKSRLD 198
Query: 117 YQAALESIQRRISQKHMVSWVVSHVLKSITPDQDKQSIKKCISDLKALAARA 168
Y + +++ RR Q+HM++WV HV++SI+ Q+K++I KCI+DLK LA +A
Sbjct: 199 YHISAQNMMRRKEQEHMINWVEKHVVQSISAQQEKETIAKCIADLKLLAKKA 250
>gi|197098464|ref|NP_001124636.1| ATP synthase subunit b, mitochondrial precursor [Pongo abelii]
gi|68565140|sp|Q5RFH9.1|AT5F1_PONAB RecName: Full=ATP synthase subunit b, mitochondrial; Short=ATPase
subunit b; Flags: Precursor
gi|55725225|emb|CAH89478.1| hypothetical protein [Pongo abelii]
Length = 256
Score = 90.9 bits (224), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 44/105 (41%), Positives = 71/105 (67%)
Query: 64 LKGAIENELWNQERSKAQAVLYEAKRENIQMQLEAVFRERALFAYQQVKNRLEYQAALES 123
++ AI+ E Q + + L++ +R NI M LE +RER Y++VKNRL+Y +++
Sbjct: 146 IQNAIDMEKSQQALVQKRHYLFDVQRNNIAMALEVTYRERLYRVYKEVKNRLDYHIYVQN 205
Query: 124 IQRRISQKHMVSWVVSHVLKSITPDQDKQSIKKCISDLKALAARA 168
+ R+ Q+HMV+WV HV++SI+ Q+K++I KCI+DLK LA +A
Sbjct: 206 MMRQKEQEHMVNWVEKHVVQSISTQQEKETIAKCIADLKLLAKKA 250
>gi|431896489|gb|ELK05901.1| ATP synthase subunit b, mitochondrial [Pteropus alecto]
Length = 256
Score = 90.9 bits (224), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 43/105 (40%), Positives = 72/105 (68%)
Query: 64 LKGAIENELWNQERSKAQAVLYEAKRENIQMQLEAVFRERALFAYQQVKNRLEYQAALES 123
++ AI+ E Q + + L++ +R NI M LE +RER Y++VK+RL+Y ++++
Sbjct: 146 IQDAIDTEKSQQALVQKRHYLFDVQRNNIAMALEVTYRERLHRVYKEVKSRLDYHISVQN 205
Query: 124 IQRRISQKHMVSWVVSHVLKSITPDQDKQSIKKCISDLKALAARA 168
+ RR Q+HM++WV HV++SI+ Q+K++I KCI+DLK LA +A
Sbjct: 206 MMRRKEQEHMINWVEKHVVQSISAQQEKETIAKCIADLKLLAKKA 250
>gi|296208831|ref|XP_002751267.1| PREDICTED: ATP synthase subunit b, mitochondrial-like [Callithrix
jacchus]
Length = 256
Score = 90.1 bits (222), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 42/105 (40%), Positives = 72/105 (68%)
Query: 64 LKGAIENELWNQERSKAQAVLYEAKRENIQMQLEAVFRERALFAYQQVKNRLEYQAALES 123
++ A++ E Q + + L++ +R NI + LE +RER Y++VKNRL+Y ++++
Sbjct: 146 IQDAVDMEKAQQALVQKRHYLFDVQRNNIALALEVTYRERLHRVYKEVKNRLDYHISVQN 205
Query: 124 IQRRISQKHMVSWVVSHVLKSITPDQDKQSIKKCISDLKALAARA 168
+ RR Q+HM++WV HV++SI+ Q+K++I KCI+DLK LA +A
Sbjct: 206 MMRRKEQEHMINWVEKHVVQSISAQQEKETIAKCIADLKLLAKKA 250
>gi|291409305|ref|XP_002720944.1| PREDICTED: ATP synthase, H+ transporting, mitochondrial F0 complex,
subunit B1-like [Oryctolagus cuniculus]
Length = 256
Score = 89.7 bits (221), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 43/105 (40%), Positives = 72/105 (68%)
Query: 64 LKGAIENELWNQERSKAQAVLYEAKRENIQMQLEAVFRERALFAYQQVKNRLEYQAALES 123
++ AIE E Q + + L++ +R NI M LE ++ER Y++VKNRL+Y ++++
Sbjct: 146 IQNAIEQEKSQQALVQKRHYLFDVQRNNIAMALELTYQERLHRVYKEVKNRLDYHISVQN 205
Query: 124 IQRRISQKHMVSWVVSHVLKSITPDQDKQSIKKCISDLKALAARA 168
+ +R Q+HM++WV HV++SI+ Q+K++I KCI+DLK LA +A
Sbjct: 206 MMQRKEQEHMINWVEKHVVQSISAQQEKETIAKCIADLKLLAKKA 250
>gi|426216228|ref|XP_004002367.1| PREDICTED: ATP synthase subunit b, mitochondrial [Ovis aries]
Length = 256
Score = 89.7 bits (221), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 43/105 (40%), Positives = 72/105 (68%)
Query: 64 LKGAIENELWNQERSKAQAVLYEAKRENIQMQLEAVFRERALFAYQQVKNRLEYQAALES 123
++ AI+ E Q + + L++ +R NI M LE +RER Y++VKNRL+Y ++++
Sbjct: 146 IQDAIDMEKSQQALVQKRHYLFDVQRNNIAMALEVTYRERLHRVYREVKNRLDYHISVQN 205
Query: 124 IQRRISQKHMVSWVVSHVLKSITPDQDKQSIKKCISDLKALAARA 168
+ R+ Q+HM++WV HV++SI+ Q+K++I KCI+DLK LA +A
Sbjct: 206 MMRQKEQEHMINWVEKHVVQSISAQQEKETIAKCIADLKLLAKKA 250
>gi|281339611|gb|EFB15195.1| hypothetical protein PANDA_017308 [Ailuropoda melanoleuca]
Length = 230
Score = 89.7 bits (221), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 43/105 (40%), Positives = 71/105 (67%)
Query: 64 LKGAIENELWNQERSKAQAVLYEAKRENIQMQLEAVFRERALFAYQQVKNRLEYQAALES 123
++ AI+ E Q + + L++ +R NI M LE +RER +++VKNRL+Y ++++
Sbjct: 120 IQDAIDTEKSQQALVQKRHYLFDVQRNNIAMALELTYRERLHRVHREVKNRLDYHISVQN 179
Query: 124 IQRRISQKHMVSWVVSHVLKSITPDQDKQSIKKCISDLKALAARA 168
+ RR Q HM++WV HV++SI+ Q+K++I KCI+DLK LA +A
Sbjct: 180 MMRRKEQDHMINWVEKHVVQSISAQQEKETIAKCIADLKLLAKKA 224
>gi|301784216|ref|XP_002927523.1| PREDICTED: ATP synthase subunit b, mitochondrial-like [Ailuropoda
melanoleuca]
Length = 256
Score = 89.7 bits (221), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 43/105 (40%), Positives = 71/105 (67%)
Query: 64 LKGAIENELWNQERSKAQAVLYEAKRENIQMQLEAVFRERALFAYQQVKNRLEYQAALES 123
++ AI+ E Q + + L++ +R NI M LE +RER +++VKNRL+Y ++++
Sbjct: 146 IQDAIDTEKSQQALVQKRHYLFDVQRNNIAMALELTYRERLHRVHREVKNRLDYHISVQN 205
Query: 124 IQRRISQKHMVSWVVSHVLKSITPDQDKQSIKKCISDLKALAARA 168
+ RR Q HM++WV HV++SI+ Q+K++I KCI+DLK LA +A
Sbjct: 206 MMRRKEQDHMINWVEKHVVQSISAQQEKETIAKCIADLKLLAKKA 250
>gi|19705465|ref|NP_599192.1| ATP synthase subunit b, mitochondrial precursor [Rattus norvegicus]
gi|392345968|ref|XP_003749420.1| PREDICTED: ATP synthase subunit b, mitochondrial-like [Rattus
norvegicus]
gi|114625|sp|P19511.1|AT5F1_RAT RecName: Full=ATP synthase subunit b, mitochondrial; Short=ATPase
subunit b; Flags: Precursor
gi|207089|gb|AAA42187.1| F-0-ATPase subunit b precursor [Rattus norvegicus]
gi|39645769|gb|AAH63808.1| ATP synthase, H+ transporting, mitochondrial F0 complex, subunit B1
[Rattus norvegicus]
gi|149025585|gb|EDL81828.1| ATP synthase, H+ transporting, mitochondrial F0 complex, subunit b,
isoform 1, isoform CRA_b [Rattus norvegicus]
Length = 256
Score = 89.7 bits (221), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 43/105 (40%), Positives = 69/105 (65%)
Query: 64 LKGAIENELWNQERSKAQAVLYEAKRENIQMQLEAVFRERALFAYQQVKNRLEYQAALES 123
++ AI E Q + + L++ +R NI + LE +RER AY++VKNRL+Y +++
Sbjct: 146 IQDAINREKAQQALVQKRHYLFDVQRNNIALALEVTYRERLHKAYKEVKNRLDYHISVQD 205
Query: 124 IQRRISQKHMVSWVVSHVLKSITPDQDKQSIKKCISDLKALAARA 168
+ RR +HM++WV HV++SI+ Q+K++I KCI DLK LA +A
Sbjct: 206 MMRRKEGEHMINWVEKHVIQSISAQQEKETIAKCIGDLKMLAKKA 250
>gi|148675591|gb|EDL07538.1| ATP synthase, H+ transporting, mitochondrial F0 complex, subunit b,
isoform 1, isoform CRA_b [Mus musculus]
Length = 110
Score = 89.0 bits (219), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 40/85 (47%), Positives = 62/85 (72%)
Query: 84 LYEAKRENIQMQLEAVFRERALFAYQQVKNRLEYQAALESIQRRISQKHMVSWVVSHVLK 143
L++ +R NI + LE +RER AY++VKNRL+Y +++++ RR ++HM+ WV HV+K
Sbjct: 20 LFDVQRNNIALALEVTYRERLHKAYKEVKNRLDYHISVQNMMRRKEEEHMIDWVEKHVVK 79
Query: 144 SITPDQDKQSIKKCISDLKALAARA 168
SI+ Q+K++I KCI DLK LA +A
Sbjct: 80 SISVQQEKETIAKCIEDLKLLAKKA 104
>gi|297494026|gb|ADI40735.1| mitochondrial H+-transporting ATP synthase F0 complex subunit B1
[Cynopterus sphinx]
Length = 209
Score = 89.0 bits (219), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 42/102 (41%), Positives = 70/102 (68%)
Query: 64 LKGAIENELWNQERSKAQAVLYEAKRENIQMQLEAVFRERALFAYQQVKNRLEYQAALES 123
++ AI+ E Q + + L++ +R NI M LE +RER Y++VK+RL+Y ++++
Sbjct: 108 IQDAIDTEKSQQALVQKRHYLFDVQRNNIAMALEVTYRERLHRVYKEVKSRLDYHISVQN 167
Query: 124 IQRRISQKHMVSWVVSHVLKSITPDQDKQSIKKCISDLKALA 165
+ RR Q+HM++WV HV++SI+ Q+K++I KCI+DLK LA
Sbjct: 168 MMRRKEQEHMINWVEKHVVQSISAQQEKETIAKCIADLKLLA 209
>gi|256082167|ref|XP_002577332.1| mitochondrial ATP synthase B chain [Schistosoma mansoni]
gi|353232631|emb|CCD79985.1| putative mitochondrial ATP synthase B chain [Schistosoma mansoni]
Length = 297
Score = 89.0 bits (219), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 44/90 (48%), Positives = 59/90 (65%)
Query: 76 ERSKAQAVLYEAKRENIQMQLEAVFRERALFAYQQVKNRLEYQAALESIQRRISQKHMVS 135
ER+ A AK ENI +QLEA +RER Y+ V RLEY E+ ++R Q+HMV+
Sbjct: 199 ERAAAVPEHVRAKEENIALQLEATYRERLQSVYRTVHRRLEYHVERENTRKRYIQQHMVN 258
Query: 136 WVVSHVLKSITPDQDKQSIKKCISDLKALA 165
WVV HV+K ITP Q+K ++ CI++LK LA
Sbjct: 259 WVVDHVVKGITPAQEKDTLTHCINELKRLA 288
>gi|335287187|ref|XP_003355292.1| PREDICTED: ATP synthase subunit b, mitochondrial [Sus scrofa]
Length = 256
Score = 88.2 bits (217), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 42/105 (40%), Positives = 71/105 (67%)
Query: 64 LKGAIENELWNQERSKAQAVLYEAKRENIQMQLEAVFRERALFAYQQVKNRLEYQAALES 123
++ AI+ E Q + + L++ +R NI M LE +RER Y+++KNRL+Y ++++
Sbjct: 146 IQDAIDLEKSQQALVQKRHYLFDVQRNNIAMALEVTYRERLHRVYKEIKNRLDYHISVQN 205
Query: 124 IQRRISQKHMVSWVVSHVLKSITPDQDKQSIKKCISDLKALAARA 168
+ R+ Q+HM+ WV HV++SI+ Q+K++I KCI+DLK LA +A
Sbjct: 206 MMRQKEQEHMIRWVEKHVVQSISAQQEKETIAKCIADLKLLAKKA 250
>gi|351708068|gb|EHB10987.1| ATP synthase subunit b, mitochondrial [Heterocephalus glaber]
Length = 261
Score = 87.8 bits (216), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 42/108 (38%), Positives = 72/108 (66%)
Query: 61 LASLKGAIENELWNQERSKAQAVLYEAKRENIQMQLEAVFRERALFAYQQVKNRLEYQAA 120
+ ++ AI+ E Q ++ + L++ +R NI M LE +RER Y++VKNRL+Y +
Sbjct: 148 IKQIQDAIDLEKSQQTLAQKRHYLFDVQRNNIAMALEVTYRERLHRVYKEVKNRLDYHIS 207
Query: 121 LESIQRRISQKHMVSWVVSHVLKSITPDQDKQSIKKCISDLKALAARA 168
++++ R Q+HM++WV V++SI+ Q+K++I KCI+DLK LA +A
Sbjct: 208 VQNVMHRKEQEHMINWVEKQVVQSISAQQEKETIAKCIADLKLLAKKA 255
>gi|344255921|gb|EGW12025.1| ATP synthase subunit b, mitochondrial [Cricetulus griseus]
Length = 235
Score = 87.4 bits (215), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 42/105 (40%), Positives = 72/105 (68%)
Query: 64 LKGAIENELWNQERSKAQAVLYEAKRENIQMQLEAVFRERALFAYQQVKNRLEYQAALES 123
++ AI+ E +Q + + L++ +R NI + LE +R+R AY++VKNRL+Y ++++
Sbjct: 125 IQDAIDMEKAHQALVQKRHYLFDVQRNNIALALEVTYRDRLYRAYKEVKNRLDYHISVQN 184
Query: 124 IQRRISQKHMVSWVVSHVLKSITPDQDKQSIKKCISDLKALAARA 168
+ RR ++HM+ WV HV+ SI+ Q+K++I KCI+DLK LA +A
Sbjct: 185 MLRRKEEEHMMDWVEKHVVWSISAQQEKETINKCIADLKLLAKKA 229
>gi|354504683|ref|XP_003514403.1| PREDICTED: ATP synthase subunit b, mitochondrial-like [Cricetulus
griseus]
Length = 244
Score = 87.4 bits (215), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 42/105 (40%), Positives = 72/105 (68%)
Query: 64 LKGAIENELWNQERSKAQAVLYEAKRENIQMQLEAVFRERALFAYQQVKNRLEYQAALES 123
++ AI+ E +Q + + L++ +R NI + LE +R+R AY++VKNRL+Y ++++
Sbjct: 134 IQDAIDMEKAHQALVQKRHYLFDVQRNNIALALEVTYRDRLYRAYKEVKNRLDYHISVQN 193
Query: 124 IQRRISQKHMVSWVVSHVLKSITPDQDKQSIKKCISDLKALAARA 168
+ RR ++HM+ WV HV+ SI+ Q+K++I KCI+DLK LA +A
Sbjct: 194 MLRRKEEEHMMDWVEKHVVWSISAQQEKETINKCIADLKLLAKKA 238
>gi|348587038|ref|XP_003479275.1| PREDICTED: ATP synthase subunit b, mitochondrial-like [Cavia
porcellus]
Length = 256
Score = 87.0 bits (214), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 43/105 (40%), Positives = 70/105 (66%)
Query: 64 LKGAIENELWNQERSKAQAVLYEAKRENIQMQLEAVFRERALFAYQQVKNRLEYQAALES 123
++ AIE E Q + + L++ +R NI M LE +RER Y++VKNRL+Y ++++
Sbjct: 146 IQDAIELEKSQQALVQKRHYLFDVQRNNIAMALEVTYRERLHRVYKEVKNRLDYHISVQN 205
Query: 124 IQRRISQKHMVSWVVSHVLKSITPDQDKQSIKKCISDLKALAARA 168
+ +R Q+HM+ WV V++SI+ Q+K++I KCI+DLK LA +A
Sbjct: 206 MMQRKEQEHMIGWVEKQVVQSISAQQEKETIAKCIADLKLLAKKA 250
>gi|328696873|ref|XP_003240157.1| PREDICTED: ATP synthase subunit b, mitochondrial-like
[Acyrthosiphon pisum]
Length = 268
Score = 87.0 bits (214), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 59/157 (37%), Positives = 84/157 (53%), Gaps = 18/157 (11%)
Query: 14 TIGPVSLGEPIWVSDMAKCAQVMNRSVVLTWVMYQSHRAGKIRTNDKLASLKGAIEN--- 70
TIG +G W A A ++R + S R G+I SL+ +E+
Sbjct: 125 TIGVFYVG---WKKFGASLASSIDREIDEYEASCSSSRIGEI------DSLRKTVEHQKI 175
Query: 71 ELWNQERSKAQAVLYEAKRENIQMQLEAVFRERALFAYQQVKNRLEYQAALESIQRRISQ 130
E+W R++AQ AKREN+ +QLEA +R R + AY QVK RL+YQ L ++ R +
Sbjct: 176 EVW---RTEAQTQTIRAKRENVAIQLEAAYRGRLIRAYNQVKRRLDYQVDLANLTRTVQH 232
Query: 131 KHMVSWVVSHVLKSITPDQDKQSIKKCISDLKALAAR 167
K MV W+V +V SI + + KKCI DL+ LAA+
Sbjct: 233 KFMVKWIVDNVKSSI---NENDNFKKCIKDLQILAAK 266
>gi|225717494|gb|ACO14593.1| ATP synthase subunit b, mitochondrial precursor [Caligus clemensi]
Length = 247
Score = 87.0 bits (214), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 41/83 (49%), Positives = 60/83 (72%)
Query: 83 VLYEAKRENIQMQLEAVFRERALFAYQQVKNRLEYQAALESIQRRISQKHMVSWVVSHVL 142
L EAK+E++ +QLEA +R R AY +VK RL+YQ ++QRR+ QKHMV+W++ V
Sbjct: 165 TLIEAKKESVALQLEAAYRSRLQEAYTKVKERLDYQLETANVQRRMEQKHMVNWILEGVQ 224
Query: 143 KSITPDQDKQSIKKCISDLKALA 165
K+IT Q++ ++KK I+DLK LA
Sbjct: 225 KAITAKQEEDALKKAIADLKTLA 247
>gi|357625070|gb|EHJ75622.1| ATP synthase b [Danaus plexippus]
Length = 223
Score = 85.9 bits (211), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 44/99 (44%), Positives = 62/99 (62%), Gaps = 3/99 (3%)
Query: 69 ENELWNQERSKAQAVLYEAKRENIQMQLEAVFRERALFAYQQVKNRLEYQAALESIQRRI 128
E+ +W R++ Q VL +AK+ENI MQLEAV+RER + AY+ +K R++YQ L RI
Sbjct: 126 EDAIW---RAQGQKVLMDAKKENIVMQLEAVYRERLMQAYRSIKGRMDYQVKLHQSNARI 182
Query: 129 SQKHMVSWVVSHVLKSITPDQDKQSIKKCISDLKALAAR 167
QK M+ W++ V KSITPD +K+ I + A R
Sbjct: 183 QQKWMIEWIIDQVKKSITPDFEKRVFDNAILQIADAAGR 221
>gi|358331745|dbj|GAA50512.1| F-type H+-transporting ATPase subunit b [Clonorchis sinensis]
Length = 325
Score = 85.9 bits (211), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 42/94 (44%), Positives = 63/94 (67%), Gaps = 2/94 (2%)
Query: 74 NQERSKAQAV--LYEAKRENIQMQLEAVFRERALFAYQQVKNRLEYQAALESIQRRISQK 131
++E ++A AV L +AK EN+ +QLEA +RER Y+ V RL+Y E+ +RR Q
Sbjct: 223 DEEITRASAVGSLVKAKEENVALQLEAAYRERLQQVYRAVHRRLDYHVERENTRRRFQQT 282
Query: 132 HMVSWVVSHVLKSITPDQDKQSIKKCISDLKALA 165
H+++WVV V+K ITP Q+K+++ CI +LK LA
Sbjct: 283 HLINWVVDQVVKGITPAQEKETLTYCIGELKRLA 316
>gi|114786425|gb|ABI78941.1| mitochondrial ATP synthase B subunit [Clonorchis sinensis]
Length = 300
Score = 85.5 bits (210), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 42/94 (44%), Positives = 63/94 (67%), Gaps = 2/94 (2%)
Query: 74 NQERSKAQAV--LYEAKRENIQMQLEAVFRERALFAYQQVKNRLEYQAALESIQRRISQK 131
++E ++A AV L +AK EN+ +QLEA +RER Y+ V RL+Y E+ +RR Q
Sbjct: 198 DEEITRASAVGSLVKAKEENVALQLEAAYRERLQQVYRAVHRRLDYHVERENTRRRFQQT 257
Query: 132 HMVSWVVSHVLKSITPDQDKQSIKKCISDLKALA 165
H+++WVV V+K ITP Q+K+++ CI +LK LA
Sbjct: 258 HLINWVVDQVVKGITPAQEKETLTYCIGELKRLA 291
>gi|328726604|ref|XP_001949968.2| PREDICTED: ATP synthase subunit b, mitochondrial-like, partial
[Acyrthosiphon pisum]
Length = 175
Score = 85.5 bits (210), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 58/157 (36%), Positives = 86/157 (54%), Gaps = 18/157 (11%)
Query: 14 TIGPVSLGEPIWVSDMAKCAQVMNRSVVLTWVMYQSHRAGKIRTNDKLASLKGAIEN--- 70
TIG +G W A A ++R + S R G+I SL+ +E+
Sbjct: 30 TIGLFYVG---WKKFGASLASSIDREIDEYEASCNSSRIGEID------SLRKTVEHQKI 80
Query: 71 ELWNQERSKAQAVLYEAKRENIQMQLEAVFRERALFAYQQVKNRLEYQAALESIQRRISQ 130
E+W R++AQA + AKREN+ +QLEA + R + AY QVK RL+YQ L ++ R +
Sbjct: 81 EVW---RTEAQAQIIRAKRENVAIQLEAAYGGRLIQAYNQVKRRLDYQVDLANLTRTVQH 137
Query: 131 KHMVSWVVSHVLKSITPDQDKQSIKKCISDLKALAAR 167
K+MV W+V +V SI + + KKC+ DL+ LAA+
Sbjct: 138 KNMVKWIVDNVKSSINENDN---FKKCLDDLQILAAK 171
>gi|328726709|ref|XP_001952346.2| PREDICTED: ATP synthase subunit b, mitochondrial-like, partial
[Acyrthosiphon pisum]
Length = 173
Score = 85.5 bits (210), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 57/157 (36%), Positives = 85/157 (54%), Gaps = 18/157 (11%)
Query: 14 TIGPVSLGEPIWVSDMAKCAQVMNRSVVLTWVMYQSHRAGKIRTNDKLASLKGAIEN--- 70
TIG +G W A A ++R + S R G+I SL+ +E+
Sbjct: 30 TIGVFYVG---WKKFGASLASSIDREIEEYEASCNSSRIGEI------DSLRKTVEHQKI 80
Query: 71 ELWNQERSKAQAVLYEAKRENIQMQLEAVFRERALFAYQQVKNRLEYQAALESIQRRISQ 130
E+W R++AQ + AKREN+ +QLEA +R R + AY QVK RL+YQ L ++ R +
Sbjct: 81 EVW---RTEAQTQIIRAKRENVAIQLEAAYRGRLIRAYNQVKRRLDYQVGLANLTRTVQH 137
Query: 131 KHMVSWVVSHVLKSITPDQDKQSIKKCISDLKALAAR 167
+ MV W++ +V SI + + KKCI DL+ LAA+
Sbjct: 138 RFMVKWILDNVKSSINENDN---FKKCIKDLQILAAK 171
>gi|344275649|ref|XP_003409624.1| PREDICTED: ATP synthase subunit b, mitochondrial-like [Loxodonta
africana]
Length = 256
Score = 85.1 bits (209), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 55/187 (29%), Positives = 97/187 (51%), Gaps = 23/187 (12%)
Query: 5 FVMQHGKFDTIGPVSLGEPIWVSDMAK-----CAQVMNRSVVLTWVMYQSHRAGKI--RT 57
F + + K GP LG + + ++K ++ ++ + + V+Y + G +
Sbjct: 64 FQLLYPKTGVTGPYVLGTGLILYFLSKEIYVITSETVSGAALAVLVIYAVKKYGAFIGQF 123
Query: 58 NDKLASLKGA----------------IENELWNQERSKAQAVLYEAKRENIQMQLEAVFR 101
DKL+ K A I+ E Q + + L++ +R NI M E +R
Sbjct: 124 ADKLSEEKIARLEEFKQSCIKYAEDGIDFEKEKQAVVQKRHYLFDVQRNNIAMAFEVAYR 183
Query: 102 ERALFAYQQVKNRLEYQAALESIQRRISQKHMVSWVVSHVLKSITPDQDKQSIKKCISDL 161
ER Y++VKNRL+Y +++++ RR Q+HM++W+ V++SI+ Q+K++I KCI DL
Sbjct: 184 ERLHTVYREVKNRLDYHISVQNMMRRKEQEHMINWLEKKVVQSISAQQEKETIAKCIEDL 243
Query: 162 KALAARA 168
K LA +A
Sbjct: 244 KLLAKKA 250
>gi|110591026|pdb|2CLY|A Chain A, Subcomplex Of The Stator Of Bovine Mitochondrial Atp
Synthase
gi|110591029|pdb|2CLY|D Chain D, Subcomplex Of The Stator Of Bovine Mitochondrial Atp
Synthase
gi|602033|emb|CAA29472.1| mat. b-subunit (AA 1-214) [Bos taurus]
Length = 214
Score = 85.1 bits (209), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 41/108 (37%), Positives = 72/108 (66%)
Query: 61 LASLKGAIENELWNQERSKAQAVLYEAKRENIQMQLEAVFRERALFAYQQVKNRLEYQAA 120
+ ++ AI+ E Q + + L++ +R NI M LE +RER Y++VKNRL+Y +
Sbjct: 101 IKQIQDAIDMEKSQQALVQKRHYLFDVQRNNIAMALEVTYRERLHRVYREVKNRLDYHIS 160
Query: 121 LESIQRRISQKHMVSWVVSHVLKSITPDQDKQSIKKCISDLKALAARA 168
++++ R+ Q+HM++WV V++SI+ Q+K++I KCI+DLK L+ +A
Sbjct: 161 VQNMMRQKEQEHMINWVEKRVVQSISAQQEKETIAKCIADLKLLSKKA 208
>gi|84490369|ref|NP_001033590.1| ATP synthase subunit b, mitochondrial precursor [Bos taurus]
gi|110825707|sp|P13619.2|AT5F1_BOVIN RecName: Full=ATP synthase subunit b, mitochondrial; Short=ATPase
subunit b; Flags: Precursor
gi|83759127|gb|AAI10213.1| ATP synthase, H+ transporting, mitochondrial F0 complex, subunit B1
[Bos taurus]
gi|296489328|tpg|DAA31441.1| TPA: ATP synthase subunit b, mitochondrial precursor [Bos taurus]
Length = 256
Score = 85.1 bits (209), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 41/105 (39%), Positives = 71/105 (67%)
Query: 64 LKGAIENELWNQERSKAQAVLYEAKRENIQMQLEAVFRERALFAYQQVKNRLEYQAALES 123
++ AI+ E Q + + L++ +R NI M LE +RER Y++VKNRL+Y ++++
Sbjct: 146 IQDAIDMEKSQQALVQKRHYLFDVQRNNIAMALEVTYRERLHRVYREVKNRLDYHISVQN 205
Query: 124 IQRRISQKHMVSWVVSHVLKSITPDQDKQSIKKCISDLKALAARA 168
+ R+ Q+HM++WV V++SI+ Q+K++I KCI+DLK L+ +A
Sbjct: 206 MMRQKEQEHMINWVEKRVVQSISAQQEKETIAKCIADLKLLSKKA 250
>gi|226482546|emb|CAX73872.1| ATP synthase, subunit b [Schistosoma japonicum]
Length = 298
Score = 84.7 bits (208), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 41/89 (46%), Positives = 60/89 (67%)
Query: 77 RSKAQAVLYEAKRENIQMQLEAVFRERALFAYQQVKNRLEYQAALESIQRRISQKHMVSW 136
R+ A + AK ENI +QLEA +RER Y+ V RL+Y E+ ++R Q+HMV+W
Sbjct: 201 RTTAVSEHVRAKEENIALQLEATYRERLQKVYRAVHRRLDYHVEWENTRKRYIQQHMVNW 260
Query: 137 VVSHVLKSITPDQDKQSIKKCISDLKALA 165
VV HV+K ITP Q+K+++ CI++L+ LA
Sbjct: 261 VVDHVVKGITPAQEKETLAHCINELERLA 289
>gi|56752667|gb|AAW24547.1| SJCHGC09031 protein [Schistosoma japonicum]
gi|226482548|emb|CAX73873.1| ATP synthase, subunit b [Schistosoma japonicum]
Length = 274
Score = 84.7 bits (208), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 41/89 (46%), Positives = 60/89 (67%)
Query: 77 RSKAQAVLYEAKRENIQMQLEAVFRERALFAYQQVKNRLEYQAALESIQRRISQKHMVSW 136
R+ A + AK ENI +QLEA +RER Y+ V RL+Y E+ ++R Q+HMV+W
Sbjct: 177 RTTAVSEHVRAKEENIALQLEATYRERLQKVYRAVHRRLDYHVEWENTRKRYIQQHMVNW 236
Query: 137 VVSHVLKSITPDQDKQSIKKCISDLKALA 165
VV HV+K ITP Q+K+++ CI++L+ LA
Sbjct: 237 VVDHVVKGITPAQEKETLAHCINELERLA 265
>gi|156391925|ref|XP_001635800.1| predicted protein [Nematostella vectensis]
gi|156222897|gb|EDO43737.1| predicted protein [Nematostella vectensis]
Length = 240
Score = 84.3 bits (207), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 43/114 (37%), Positives = 66/114 (57%)
Query: 52 AGKIRTNDKLASLKGAIENELWNQERSKAQAVLYEAKRENIQMQLEAVFRERALFAYQQV 111
A + N + L+ AI+NE + + + E REN M +E +R ++V
Sbjct: 126 AFNVGRNASIKHLQDAIDNEKHLEHMLSCRTDIIEMMRENNVMGMELEYRNNVHHVVKEV 185
Query: 112 KNRLEYQAALESIQRRISQKHMVSWVVSHVLKSITPDQDKQSIKKCISDLKALA 165
K RL+YQ +E+ R++ Q H++ WV V+KSITP Q+K+SI +CI DLKA+A
Sbjct: 186 KKRLDYQVEMETFHRKVEQAHIIDWVEKEVIKSITPQQEKESISQCIRDLKAMA 239
>gi|402550260|pdb|4B2Q|T Chain T, Model Of The Yeast F1fo-Atp Synthase Dimer Based On
Subtomogram Average
gi|402550283|pdb|4B2Q|TT Chain t, Model Of The Yeast F1fo-Atp Synthase Dimer Based On
Subtomogram Average
Length = 129
Score = 82.4 bits (202), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 40/107 (37%), Positives = 71/107 (66%)
Query: 61 LASLKGAIENELWNQERSKAQAVLYEAKRENIQMQLEAVFRERALFAYQQVKNRLEYQAA 120
+ ++ AI+ E Q + + L++ +R NI M LE +RER Y++VKNRL+Y +
Sbjct: 23 IKQIQDAIDMEKSQQALVQKRHYLFDVQRNNIAMALEVTYRERLHRVYREVKNRLDYHIS 82
Query: 121 LESIQRRISQKHMVSWVVSHVLKSITPDQDKQSIKKCISDLKALAAR 167
++++ R+ Q+HM++WV V++SI+ Q+K++I KCI+DLK L+ +
Sbjct: 83 VQNMMRQKEQEHMINWVEKRVVQSISAQQEKETIAKCIADLKLLSKK 129
>gi|395842257|ref|XP_003793935.1| PREDICTED: ATP synthase subunit b, mitochondrial [Otolemur
garnettii]
Length = 256
Score = 82.4 bits (202), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 38/97 (39%), Positives = 66/97 (68%)
Query: 64 LKGAIENELWNQERSKAQAVLYEAKRENIQMQLEAVFRERALFAYQQVKNRLEYQAALES 123
++ AI+ E Q + + L++ +R NI M LE +R+R Y++VKNRL+Y ++++
Sbjct: 146 IQDAIDMEKSQQALVQKRHYLFDVQRNNIAMALELTYRDRLHRVYKEVKNRLDYHLSVQN 205
Query: 124 IQRRISQKHMVSWVVSHVLKSITPDQDKQSIKKCISD 160
+ RR Q+HM++WV HV++SI+ Q+K++I KCI+D
Sbjct: 206 MMRRKEQEHMINWVEKHVVQSISAQQEKETIAKCIAD 242
>gi|242005663|ref|XP_002423682.1| ATP synthase B chain, putative [Pediculus humanus corporis]
gi|212506858|gb|EEB10944.1| ATP synthase B chain, putative [Pediculus humanus corporis]
Length = 124
Score = 80.9 bits (198), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 31/82 (37%), Positives = 63/82 (76%)
Query: 87 AKRENIQMQLEAVFRERALFAYQQVKNRLEYQAALESIQRRISQKHMVSWVVSHVLKSIT 146
AK+EN+ +Q+E+++RER + ++++K +L++Q + +++R+ Q+++V +VVSHV+KSIT
Sbjct: 43 AKKENVFLQMESIYRERLMEVHKKIKKQLDFQVEMSNLERKTVQRNLVDYVVSHVMKSIT 102
Query: 147 PDQDKQSIKKCISDLKALAARA 168
P+Q++ ++ CI +L LA +
Sbjct: 103 PEQEQNTMNLCIKELNNLALKV 124
>gi|225712310|gb|ACO12001.1| ATP synthase subunit b, mitochondrial precursor [Lepeophtheirus
salmonis]
Length = 246
Score = 79.7 bits (195), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 38/83 (45%), Positives = 57/83 (68%)
Query: 83 VLYEAKRENIQMQLEAVFRERALFAYQQVKNRLEYQAALESIQRRISQKHMVSWVVSHVL 142
L EAK+E++ +QLE +R R AY +VK RL+YQ ++ RR+ QKHMV+W++ V
Sbjct: 164 TLIEAKKESVALQLENAYRSRLQEAYLRVKERLDYQLETANVHRRMEQKHMVNWILDGVK 223
Query: 143 KSITPDQDKQSIKKCISDLKALA 165
K+IT Q++ ++KK I+DL LA
Sbjct: 224 KAITNKQEEDALKKAIADLNTLA 246
>gi|339247627|ref|XP_003375447.1| conserved hypothetical protein [Trichinella spiralis]
gi|316971195|gb|EFV55007.1| conserved hypothetical protein [Trichinella spiralis]
Length = 264
Score = 79.3 bits (194), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 39/85 (45%), Positives = 60/85 (70%)
Query: 83 VLYEAKRENIQMQLEAVFRERALFAYQQVKNRLEYQAALESIQRRISQKHMVSWVVSHVL 142
++YEAKRENI +Q+EA +R+R A++ VK RL+Y A +++R+ +K+M+ WVV+ V
Sbjct: 175 MIYEAKRENIALQIEADYRQRLAVAHRNVKQRLDYMAESAALKRKYQRKNMLDWVVNEVK 234
Query: 143 KSITPDQDKQSIKKCISDLKALAAR 167
KSIT Q+K + +CI LK L+ R
Sbjct: 235 KSITAQQEKAMMTQCIDRLKELSQR 259
>gi|268612217|pdb|2WSS|T Chain T, The Structure Of The Membrane Extrinsic Region Of Bovine
Atp Synthase
gi|268612221|pdb|2WSS|X Chain X, The Structure Of The Membrane Extrinsic Region Of Bovine
Atp Synthase
Length = 116
Score = 78.6 bits (192), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 39/108 (36%), Positives = 69/108 (63%)
Query: 61 LASLKGAIENELWNQERSKAQAVLYEAKRENIQMQLEAVFRERALFAYQQVKNRLEYQAA 120
+ ++ AI+ E Q + + L++ +R NI LE +RER Y++VKNRL+Y +
Sbjct: 3 IKQIQDAIDXEKSQQALVQKRHYLFDVQRNNIAXALEVTYRERLHRVYREVKNRLDYHIS 62
Query: 121 LESIQRRISQKHMVSWVVSHVLKSITPDQDKQSIKKCISDLKALAARA 168
+++ R+ Q+H ++WV V++SI+ Q+K++I KCI+DLK L+ +A
Sbjct: 63 VQNXXRQKEQEHXINWVEKRVVQSISAQQEKETIAKCIADLKLLSKKA 110
>gi|397514192|ref|XP_003827379.1| PREDICTED: ATP synthase subunit b, mitochondrial-like [Pan
paniscus]
Length = 171
Score = 76.3 bits (186), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 36/91 (39%), Positives = 61/91 (67%)
Query: 64 LKGAIENELWNQERSKAQAVLYEAKRENIQMQLEAVFRERALFAYQQVKNRLEYQAALES 123
++ AI+ E Q + + L++ +R NI M LE +RER Y++VKNRL+Y ++++
Sbjct: 76 IQNAIDMEKSQQALVQKRHYLFDVQRNNIAMALEVTYRERLYRVYKEVKNRLDYHISVQN 135
Query: 124 IQRRISQKHMVSWVVSHVLKSITPDQDKQSI 154
+ RR Q+HM++WV HV++SIT Q+K++I
Sbjct: 136 MMRRKEQEHMINWVEKHVVQSITTQQEKETI 166
>gi|332850288|ref|XP_001143839.2| PREDICTED: ATP synthase subunit b, mitochondrial-like [Pan
troglodytes]
Length = 205
Score = 74.7 bits (182), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 35/91 (38%), Positives = 61/91 (67%)
Query: 64 LKGAIENELWNQERSKAQAVLYEAKRENIQMQLEAVFRERALFAYQQVKNRLEYQAALES 123
++ AI+ E Q + + L++ +R NI M LE +RER Y++VKNRL+Y ++++
Sbjct: 110 IQNAIDMEKSQQALVQKRHYLFDVQRNNIAMALEVTYRERLYRVYKEVKNRLDYHISVQN 169
Query: 124 IQRRISQKHMVSWVVSHVLKSITPDQDKQSI 154
+ RR Q+HM++WV HV++SI+ Q+K++I
Sbjct: 170 MMRRKEQEHMINWVEKHVVQSISTQQEKETI 200
>gi|196002069|ref|XP_002110902.1| expressed hypothetical protein [Trichoplax adhaerens]
gi|190586853|gb|EDV26906.1| expressed hypothetical protein [Trichoplax adhaerens]
Length = 248
Score = 73.2 bits (178), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 38/109 (34%), Positives = 67/109 (61%)
Query: 58 NDKLASLKGAIENELWNQERSKAQAVLYEAKRENIQMQLEAVFRERALFAYQQVKNRLEY 117
N ++ L+ AIE E + ++ ++E +EN M+LE +R+R Y++VK RL+Y
Sbjct: 136 NMQMERLQEAIEAEKGIERMFDSRNEIFEVMKENNAMKLELEYRKRQQHVYEEVKKRLDY 195
Query: 118 QAALESIQRRISQKHMVSWVVSHVLKSITPDQDKQSIKKCISDLKALAA 166
Q +E +RR ++H+V W+ V+KSI+ Q+K + +C DLKA+++
Sbjct: 196 QVEVEQTKRRQEKEHIVGWLEQEVVKSISAQQEKDFLSQCFVDLKAISS 244
>gi|440897450|gb|ELR49132.1| ATP synthase subunit b, mitochondrial [Bos grunniens mutus]
Length = 267
Score = 73.2 bits (178), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 37/90 (41%), Positives = 61/90 (67%), Gaps = 8/90 (8%)
Query: 84 LYEAKRENIQMQLEAVFRERALFAYQQVKNRLEYQAALE-----SIQRRISQKHMVSWVV 138
L++ +R NI M +E +RE+ Y++VKNRL+Y +++ S+ R Q+HM++WV
Sbjct: 175 LFDVQRNNIAMAVEVTYREQLHRVYREVKNRLDYHISVQNYDAASLHR---QEHMINWVE 231
Query: 139 SHVLKSITPDQDKQSIKKCISDLKALAARA 168
V++SI+ Q+K++I KCI+DLK LA +A
Sbjct: 232 KRVVQSISAQQEKETIAKCIADLKLLAKKA 261
>gi|297494024|gb|ADI40734.1| mitochondrial H+-transporting ATP synthase F0 complex subunit B1
[Miniopterus schreibersii]
Length = 198
Score = 73.2 bits (178), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 40/95 (42%), Positives = 61/95 (64%), Gaps = 3/95 (3%)
Query: 60 KLASLKG---AIENELWNQERSKAQAVLYEAKRENIQMQLEAVFRERALFAYQQVKNRLE 116
K AS+KG AI+ E Q + + L++ +R NI M LE +RER Y++VKNRL+
Sbjct: 104 KQASIKGIQDAIDLEKSQQALVQKRHYLFDVQRNNIAMALEVTYRERLHRVYKEVKNRLD 163
Query: 117 YQAALESIQRRISQKHMVSWVVSHVLKSITPDQDK 151
Y +++++ RR Q+HMV WV HV++SI+ Q+K
Sbjct: 164 YHISVQNMMRRKEQEHMVQWVEKHVVQSISAQQEK 198
>gi|328724813|ref|XP_003248258.1| PREDICTED: ATP synthase subunit b, mitochondrial-like
[Acyrthosiphon pisum]
Length = 87
Score = 70.1 bits (170), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 37/88 (42%), Positives = 56/88 (63%), Gaps = 3/88 (3%)
Query: 77 RSKAQAVLYEAKRENIQMQLEAVFRERALFAYQQVKNRLEYQAALESIQRRISQKHMVSW 136
R++AQ + AKREN+ +QLEA +R R + AY QVK RL+YQ L ++ R + K MV+W
Sbjct: 3 RTEAQTQIIRAKRENVAIQLEAAYRGRLIRAYNQVKRRLDYQVDLANLTRTVQHKFMVNW 62
Query: 137 VVSHVLKSITPDQDKQSIKKCISDLKAL 164
+V +V SI +K++ KK + + L
Sbjct: 63 IVDNVKSSIN---EKENFKKLLFNTYIL 87
>gi|183212673|gb|ACC54999.1| mitochondrial H+-transporting ATP synthase F0 complex, subunit b,
isoform 1 alpha [Xenopus borealis]
Length = 57
Score = 70.1 bits (170), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 32/56 (57%), Positives = 44/56 (78%)
Query: 110 QVKNRLEYQAALESIQRRISQKHMVSWVVSHVLKSITPDQDKQSIKKCISDLKALA 165
+VK RL+YQ AL+ +QRR Q HM++WV +V++SI+P Q K+SI KCI+DLK LA
Sbjct: 1 EVKKRLDYQVALQHLQRRKEQDHMINWVEKNVVQSISPQQQKESIAKCITDLKLLA 56
>gi|160432044|gb|ABX44724.1| mitochondrial F0-ATP synthase b-chain [Farfantepenaeus paulensis]
Length = 71
Score = 70.1 bits (170), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 33/71 (46%), Positives = 50/71 (70%)
Query: 67 AIENELWNQERSKAQAVLYEAKRENIQMQLEAVFRERALFAYQQVKNRLEYQAALESIQR 126
A+E+E Q ++ Q +L++AKREN+ +QLEA +RER + +VK RL+YQ ++Q
Sbjct: 1 AVEDEKKAQWETEGQKMLFDAKRENVALQLEAAYRERLATVHSEVKKRLDYQLETANVQT 60
Query: 127 RISQKHMVSWV 137
RI QKHMV+W+
Sbjct: 61 RIEQKHMVNWI 71
>gi|160432046|gb|ABX44725.1| mitochondrial F0-ATP synthase b-chain [Litopenaeus schmitti]
Length = 71
Score = 68.9 bits (167), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 32/71 (45%), Positives = 50/71 (70%)
Query: 67 AIENELWNQERSKAQAVLYEAKRENIQMQLEAVFRERALFAYQQVKNRLEYQAALESIQR 126
A+E+E Q ++ Q +L++AKREN+ +QLEA +RER + +VK RL+YQ +++
Sbjct: 1 AVEDEKKAQWETEGQRILFDAKRENVALQLEAAYRERLATVHSEVKKRLDYQLETANVKT 60
Query: 127 RISQKHMVSWV 137
RI QKHMV+W+
Sbjct: 61 RIEQKHMVNWI 71
>gi|160432048|gb|ABX44726.1| mitochondrial F0-ATP synthase b-chain [Litopenaeus vannamei]
Length = 71
Score = 68.9 bits (167), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 32/71 (45%), Positives = 50/71 (70%)
Query: 67 AIENELWNQERSKAQAVLYEAKRENIQMQLEAVFRERALFAYQQVKNRLEYQAALESIQR 126
A+E+E Q ++ Q +L++AKREN+ +QLEA +RER + +VK RL+YQ +++
Sbjct: 1 AVEDEKKAQWEAEGQKILFDAKRENVALQLEAAYRERLATVHSEVKKRLDYQLETANVKT 60
Query: 127 RISQKHMVSWV 137
RI QKHMV+W+
Sbjct: 61 RIEQKHMVNWI 71
>gi|335773332|gb|AEH58357.1| mitochondrial ATP synthase subunit b-like protein [Equus caballus]
Length = 230
Score = 67.8 bits (164), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 33/83 (39%), Positives = 56/83 (67%)
Query: 64 LKGAIENELWNQERSKAQAVLYEAKRENIQMQLEAVFRERALFAYQQVKNRLEYQAALES 123
++ AI+ E Q + + L++ +R NI M LE +RER Y++VKNRL+YQ ++++
Sbjct: 146 IQDAIDLEKSQQALVQKRHYLFDVQRNNIAMALELTYRERLHRVYKEVKNRLDYQISVQN 205
Query: 124 IQRRISQKHMVSWVVSHVLKSIT 146
+ RR Q+HMV+WV HV++S++
Sbjct: 206 MMRRKEQEHMVNWVEKHVVQSLS 228
>gi|417408630|gb|JAA50857.1| Putative mitochondrial f1f0-atp synthase subunit b/atp4, partial
[Desmodus rotundus]
Length = 204
Score = 67.0 bits (162), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 38/110 (34%), Positives = 63/110 (57%), Gaps = 3/110 (2%)
Query: 62 ASLKG---AIENELWNQERSKAQAVLYEAKRENIQMQLEAVFRERALFAYQQVKNRLEYQ 118
AS+KG AI+ E Q + L++ +R N M LE +ER Y++VKN +Y
Sbjct: 89 ASIKGIQDAIDLEKSQQALVQKCHYLFDVQRNNTAMALEVTSQERLHTVYKEVKNHQDYH 148
Query: 119 AALESIQRRISQKHMVSWVVSHVLKSITPDQDKQSIKKCISDLKALAARA 168
++ ++ + KHM++WV V++SI+ Q ++ KC++DLK LA +A
Sbjct: 149 ISVHNMMHQKEHKHMINWVDKPVVQSISAQQXXXTMAKCVADLKLLAKKA 198
>gi|198434030|ref|XP_002131953.1| PREDICTED: similar to ATP synthase, H+ transporting, mitochondrial
F0 complex, subunit b isoform 2 [Ciona intestinalis]
gi|198434032|ref|XP_002131947.1| PREDICTED: similar to ATP synthase, H+ transporting, mitochondrial
F0 complex, subunit b isoform 1 [Ciona intestinalis]
Length = 267
Score = 63.5 bits (153), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 30/110 (27%), Positives = 59/110 (53%)
Query: 58 NDKLASLKGAIENELWNQERSKAQAVLYEAKRENIQMQLEAVFRERALFAYQQVKNRLEY 117
+D++ LK ++ Q RS + ++ +A + N+ M LE + R + VK +L+Y
Sbjct: 158 SDQMEDLKQTVDEIKLEQWRSGSAEMINDALKNNLAMMLETEYLNRQAAVVEAVKRKLDY 217
Query: 118 QAALESIQRRISQKHMVSWVVSHVLKSITPDQDKQSIKKCISDLKALAAR 167
Q ++ + +++ HMV W+ V+ +ITP K ++ CI+ L A+ +
Sbjct: 218 QVEVQKVDSQLAHGHMVKWIEEKVMNTITPASQKATLAACIAQLNAMPGK 267
>gi|340377197|ref|XP_003387116.1| PREDICTED: ATP synthase subunit b, mitochondrial-like [Amphimedon
queenslandica]
Length = 232
Score = 62.8 bits (151), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 35/85 (41%), Positives = 52/85 (61%), Gaps = 1/85 (1%)
Query: 84 LYEAKRENIQMQLEAVFRERALFAYQQVKNRLEYQAALESIQRRISQKHMVSWVVSHVLK 143
LYE RE M+ E ++R + ++V RLEYQ LE++++ +KH+VSW+ +V K
Sbjct: 149 LYEILREEALMKREEIYRVQLSDIRKEVMRRLEYQLQLENLEKEYEKKHLVSWLQENVYK 208
Query: 144 SITPDQDKQSIKKCISDLKALAARA 168
S+T QD +I +CI LK L A A
Sbjct: 209 SLTSKQD-DNIAQCIGSLKKLTAAA 232
>gi|340386720|ref|XP_003391856.1| PREDICTED: ATP synthase subunit b, mitochondrial-like [Amphimedon
queenslandica]
Length = 231
Score = 62.4 bits (150), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 34/83 (40%), Positives = 51/83 (61%), Gaps = 1/83 (1%)
Query: 84 LYEAKRENIQMQLEAVFRERALFAYQQVKNRLEYQAALESIQRRISQKHMVSWVVSHVLK 143
LYE RE M+ E ++R + ++V RLEYQ LE++++ +KH+VSW+ +V K
Sbjct: 149 LYEILREEALMKREEIYRVQLSDIRKEVMRRLEYQLQLENLEKEYEKKHLVSWLQENVYK 208
Query: 144 SITPDQDKQSIKKCISDLKALAA 166
S+T QD +I +CI LK L A
Sbjct: 209 SLTSKQD-DNIAQCIGSLKKLTA 230
>gi|297494022|gb|ADI40733.1| mitochondrial H+-transporting ATP synthase F0 complex subunit B1
[Scotophilus kuhlii]
Length = 165
Score = 62.0 bits (149), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 34/85 (40%), Positives = 53/85 (62%), Gaps = 3/85 (3%)
Query: 60 KLASLKG---AIENELWNQERSKAQAVLYEAKRENIQMQLEAVFRERALFAYQQVKNRLE 116
K AS+KG AI+ E Q + + L++ +R NI M LE +RER +++VKNRL+
Sbjct: 81 KQASIKGIQDAIDLEKSQQALVQKRHYLFDVQRNNIAMALEVAYRERLHKVHKEVKNRLD 140
Query: 117 YQAALESIQRRISQKHMVSWVVSHV 141
Y +++++ RR Q+HMV W+ HV
Sbjct: 141 YHISVQNMMRRKEQEHMVQWIEKHV 165
>gi|449668088|ref|XP_002155042.2| PREDICTED: ATP synthase subunit b, mitochondrial-like [Hydra
magnipapillata]
Length = 236
Score = 61.6 bits (148), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 33/107 (30%), Positives = 61/107 (57%)
Query: 59 DKLASLKGAIENELWNQERSKAQAVLYEAKRENIQMQLEAVFRERALFAYQQVKNRLEYQ 118
+++ASLK I++ ++ K Q ++ + N +M+ E +R +VK RL+YQ
Sbjct: 123 NQIASLKQVIDSHKEAKDALKYQEEFFDIIKANNEMKQEIAYRSNLHEVESEVKKRLDYQ 182
Query: 119 AALESIQRRISQKHMVSWVVSHVLKSITPDQDKQSIKKCISDLKALA 165
++ ++ I ++H+ SWV V+ SI+P Q+ ++ +CI DL LA
Sbjct: 183 IDMQKLELSIEEQHVCSWVEQKVIASISPKQESDALNQCIIDLNLLA 229
>gi|324515463|gb|ADY46209.1| ATP synthase subunit b [Ascaris suum]
Length = 315
Score = 61.2 bits (147), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 40/117 (34%), Positives = 62/117 (52%), Gaps = 15/117 (12%)
Query: 63 SLKGAIENELWNQERSKAQAVLYEAKREN--------IQMQLEAVFRERALFAYQQVKNR 114
LKGA E +E S A++ +A +EN +Q+QLEA +R +VK R
Sbjct: 203 DLKGAKEF----REASAAESRSLQAMKENFPIVFKETMQLQLEAAYRRNVQMIADEVKRR 258
Query: 115 LEYQAALESIQRRISQKHMVSWVVSHVLKSITPDQD---KQSIKKCISDLKALAARA 168
++Y E+ +RR + HM+ W++ V K I ++D Q + KCI+ LK L+A A
Sbjct: 259 IDYLQETEATRRRFERDHMLKWIIEGVRKEIAANKDGVKDQYLNKCIAQLKTLSANA 315
>gi|902560|gb|AAC15084.1| ATP synthase b chain homolog, partial [Mus musculus]
Length = 51
Score = 52.4 bits (124), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 23/43 (53%), Positives = 32/43 (74%)
Query: 126 RRISQKHMVSWVVSHVLKSITPDQDKQSIKKCISDLKALAARA 168
RR ++HM+ WV HV+KSI+ Q+K++I KCI DLK LA +A
Sbjct: 3 RRKEEEHMIDWVEKHVVKSISVQQEKETIAKCIEDLKLLAKKA 45
>gi|149025584|gb|EDL81827.1| ATP synthase, H+ transporting, mitochondrial F0 complex, subunit b,
isoform 1, isoform CRA_a [Rattus norvegicus]
Length = 51
Score = 51.2 bits (121), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 22/43 (51%), Positives = 32/43 (74%)
Query: 126 RRISQKHMVSWVVSHVLKSITPDQDKQSIKKCISDLKALAARA 168
RR +HM++WV HV++SI+ Q+K++I KCI DLK LA +A
Sbjct: 3 RRKEGEHMINWVEKHVIQSISAQQEKETIAKCIGDLKMLAKKA 45
>gi|313223208|emb|CBY43413.1| unnamed protein product [Oikopleura dioica]
Length = 145
Score = 50.1 bits (118), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 29/92 (31%), Positives = 50/92 (54%), Gaps = 2/92 (2%)
Query: 75 QERSKAQAVLYEAKRENIQMQLEAVFRERALFAYQQVKNRLEYQAALESIQRRISQKHMV 134
QE+++ QAV E K N+ + LE + R V +L YQ A+++ +HM+
Sbjct: 55 QEQAQGQAVFNEQKLTNLALMLETEYLNRQNMVVDSVTKKLNYQVAVQNALEDQESQHMI 114
Query: 135 SWVVSHVLKSITP-DQDKQSIKKCISDLKALA 165
+W+ V + I+ DQD + I C+++LK +A
Sbjct: 115 NWIEDKVNQDISNLDQD-EMINVCVANLKKMA 145
>gi|393906431|gb|EJD74279.1| hypothetical protein LOAG_18388 [Loa loa]
Length = 319
Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/102 (28%), Positives = 52/102 (50%), Gaps = 11/102 (10%)
Query: 75 QERSKAQAVLYEAKRE--------NIQMQLEAVFRERALFAYQQVKNRLEYQAALESIQR 126
QE SKA+ Y A +E N+ +QLE+ +R ++K RL+Y E+++
Sbjct: 215 QETSKAEKSAYAAMKEYYPAIFKENLALQLESTYRRNVERLATEMKRRLDYLQETEAVKH 274
Query: 127 RISQKHMVSWVVSHVLKSITPDQD---KQSIKKCISDLKALA 165
++ HM+ W+++ V I +++ + I CI LK L+
Sbjct: 275 SFARDHMLKWIINSVQSEIMANKENIKENYIDACIEQLKGLS 316
>gi|326431754|gb|EGD77324.1| hypothetical protein PTSG_08418 [Salpingoeca sp. ATCC 50818]
Length = 219
Score = 46.6 bits (109), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 29/85 (34%), Positives = 49/85 (57%), Gaps = 1/85 (1%)
Query: 84 LYEAKRENIQMQLEAVFRERALFAYQQVKNRLEYQAALESIQRRISQKHMVSWVVSHVLK 143
++A RE M+ E FRE AYQ V +LE ++ES R Q +V ++ + V K
Sbjct: 136 FFDAVREYEAMRRELAFREEQYAAYQNVIGQLENMVSIESSVRSREQDEIVQFLAAEVPK 195
Query: 144 SITPDQDKQSIKKCISDLKALAARA 168
++ +++ + KCI+DL+ L+A+A
Sbjct: 196 AL-KGKEEAIMNKCIADLQELSAQA 219
>gi|402595118|gb|EJW89044.1| hypothetical protein WUBG_00037 [Wuchereria bancrofti]
Length = 320
Score = 46.2 bits (108), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 31/104 (29%), Positives = 53/104 (50%), Gaps = 15/104 (14%)
Query: 75 QERSKAQAVLYEA--------KRENIQMQLEAVFRERALFAYQQVKNRLEYQAALESIQR 126
QE SKA+ Y A +EN+ +QLE+ +R ++K RL+Y E+++
Sbjct: 216 QETSKAERSAYAAVKEYYPAIFKENLALQLESTYRRNVERLTTEMKRRLDYLQETEAVKY 275
Query: 127 RISQKHMVSWVVSHVLKSITPDQDKQSIKK-----CISDLKALA 165
++ HM+ W++ V I +K++IK+ CI LK L+
Sbjct: 276 SFARDHMLKWIIKSVQSEIM--DNKENIKEKYMDTCIEQLKGLS 317
>gi|170582987|ref|XP_001896381.1| ATP synthase B chain, mitochondrial precursor [Brugia malayi]
gi|158596440|gb|EDP34781.1| ATP synthase B chain, mitochondrial precursor, putative [Brugia
malayi]
Length = 320
Score = 46.2 bits (108), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 31/104 (29%), Positives = 53/104 (50%), Gaps = 15/104 (14%)
Query: 75 QERSKAQAVLYEA--------KRENIQMQLEAVFRERALFAYQQVKNRLEYQAALESIQR 126
QE SKA+ Y A +EN+ +QLE+ +R+ ++K RL+Y E ++
Sbjct: 216 QETSKAERSAYAAVKEYYPAIFKENLALQLESTYRKNVERLTTEMKRRLDYLQETEXVKY 275
Query: 127 RISQKHMVSWVVSHVLKSITPDQDKQSIKK-----CISDLKALA 165
++ HM+ W++ V I +K++IK+ CI LK L+
Sbjct: 276 SFARDHMLKWIIKSVQSEIM--DNKENIKEKYMDTCIEQLKGLS 317
>gi|390466778|ref|XP_003733648.1| PREDICTED: LOW QUALITY PROTEIN: ATP synthase subunit b,
mitochondrial-like [Callithrix jacchus]
Length = 219
Score = 44.7 bits (104), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 22/86 (25%), Positives = 47/86 (54%), Gaps = 1/86 (1%)
Query: 83 VLYEAKRENIQMQLEAVFRERALFAYQQVKNRLEYQAALESIQRRISQKHMVSWVVSHVL 142
+ ++ + NI M LE + + Y+ KN +Y +++H+++W H+L
Sbjct: 117 LYFDVQMNNIVMALEVTYWKWPNSVYK-AKNHPDYHICCVEYDALKNKEHIINWAEKHML 175
Query: 143 KSITPDQDKQSIKKCISDLKALAARA 168
+ I+ Q+K+++ KC +DLK L+ ++
Sbjct: 176 ERISAQQEKETVAKCFADLKLLSKKS 201
>gi|380850862|gb|AFE85884.1| ATP synthase B-like protein [Meloidogyne incognita]
Length = 298
Score = 41.2 bits (95), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 28/111 (25%), Positives = 61/111 (54%), Gaps = 7/111 (6%)
Query: 62 ASLKGAIENELWNQERSKA----QAVLYEAKRENIQMQLEAVFRERALFAYQQVKNRLEY 117
+ LK A++ +++E+S + Q REN+ +QLE+ +R+ A +A+ ++K RL+Y
Sbjct: 187 SELKEAVDFRKFSKEQSDSFKATQENFPTILRENLALQLESAYRKNAEYAWIELKRRLDY 246
Query: 118 QAALESIQRRISQKHMVSWVVSHVLKSITPDQD---KQSIKKCISDLKALA 165
++ + R +++ + + V K I ++ ++ + +CI +LK L
Sbjct: 247 LKEVQETKERFAKEVYLKTITEGVRKMIEMNEGNIREKYMDQCIENLKLLT 297
>gi|380850860|gb|AFE85883.1| ATP synthase B-like protein [Meloidogyne incognita]
Length = 298
Score = 41.2 bits (95), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 28/111 (25%), Positives = 61/111 (54%), Gaps = 7/111 (6%)
Query: 62 ASLKGAIENELWNQERSKA----QAVLYEAKRENIQMQLEAVFRERALFAYQQVKNRLEY 117
+ LK A++ +++E+S + Q REN+ +QLE+ +R+ A +A+ ++K RL+Y
Sbjct: 187 SELKEAVDFRKFSKEQSDSFKATQENFPTILRENLALQLESAYRKNAEYAWIELKRRLDY 246
Query: 118 QAALESIQRRISQKHMVSWVVSHVLKSITPDQD---KQSIKKCISDLKALA 165
++ + R +++ + + V K I ++ ++ + +CI +LK L
Sbjct: 247 LKEVQETKERFAKEVYLKTITEGVRKMIEMNEGNIREKYMDQCIENLKLLT 297
>gi|268619134|gb|ACZ13343.1| ATP synthase B-like protein [Bursaphelenchus xylophilus]
Length = 306
Score = 41.2 bits (95), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 25/81 (30%), Positives = 45/81 (55%), Gaps = 7/81 (8%)
Query: 89 RENIQMQLEAVFRERALFAYQQVKNRLEYQAALESIQRRISQKHMVSWVVSHVLKSITPD 148
+EN+ +QLEA +R+ ++K R++Y +E ++R + VS +VS V +I D
Sbjct: 226 KENLALQLEATYRQNVETVATELKRRIDYLKDVEETKQRFERDIFVSSIVSGVQNAI--D 283
Query: 149 QDKQSIK-----KCISDLKAL 164
++ +IK CI+ +K L
Sbjct: 284 SNEGNIKGKYLDDCIAQIKNL 304
>gi|322795562|gb|EFZ18252.1| hypothetical protein SINV_12939 [Solenopsis invicta]
Length = 119
Score = 40.0 bits (92), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 20/54 (37%), Positives = 32/54 (59%)
Query: 58 NDKLASLKGAIENELWNQERSKAQAVLYEAKRENIQMQLEAVFRERALFAYQQV 111
N ++ + I +E Q Q ++ + K+ENI+MQLEA +RER + YQ+V
Sbjct: 66 NSEIGQYEDLISHEKKVQSSLDGQKMIMDIKKENIKMQLEATYRERMVQVYQEV 119
>gi|341879539|gb|EGT35474.1| hypothetical protein CAEBREN_10834 [Caenorhabditis brenneri]
Length = 1483
Score = 37.7 bits (86), Expect = 1.8, Method: Composition-based stats.
Identities = 22/100 (22%), Positives = 51/100 (51%), Gaps = 12/100 (12%)
Query: 59 DKLASLKGAIENEL--------WNQERSKAQAVLYEAK----RENIQMQLEAVFRERALF 106
D++ KG I+ +L + + +++ A L E+ +E++Q+Q+EAV+R+
Sbjct: 1124 DRVGFFKGLIQEDLKKDVDFRKTSAKHTESLAALKESMPASLKESMQLQIEAVYRKNVQT 1183
Query: 107 AYQQVKNRLEYQAALESIQRRISQKHMVSWVVSHVLKSIT 146
++K R++Y E + R+ + ++ + V K ++
Sbjct: 1184 VSNEIKRRIDYLKETEETKARLERDQLLKLINESVEKQVS 1223
>gi|328708255|ref|XP_001949505.2| PREDICTED: hypothetical protein LOC100164274 [Acyrthosiphon pisum]
Length = 357
Score = 37.0 bits (84), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 31/101 (30%), Positives = 51/101 (50%), Gaps = 15/101 (14%)
Query: 14 TIGPVSLGEPIWVSDMAKCAQVMNRSVVLTWVMYQSHRAGKIRTNDKLASLKGAIEN--- 70
TIG +G W A A ++R + S R G+I SL+ +E+
Sbjct: 267 TIGLFYVG---WKKFGASLASSIDREIDEYEASCNSSRIGEID------SLRKTVEHQKI 317
Query: 71 ELWNQERSKAQAVLYEAKRENIQMQLEAVFRERALFAYQQV 111
E+W R++AQA + AKREN+ +QLEA + R + ++++
Sbjct: 318 EVW---RTEAQAQIIRAKRENVAIQLEAAYGGRLIPSFERT 355
>gi|167536879|ref|XP_001750110.1| hypothetical protein [Monosiga brevicollis MX1]
gi|163771439|gb|EDQ85106.1| predicted protein [Monosiga brevicollis MX1]
Length = 221
Score = 37.0 bits (84), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 30/103 (29%), Positives = 51/103 (49%), Gaps = 5/103 (4%)
Query: 67 AIENELWNQERSKAQAV----LYEAKRENIQMQLEAVFRERALFAYQQVKNRLEYQAALE 122
AIE E+ QE+ KA +Y+ RE E +R A L+ A+E
Sbjct: 116 AIEKEIAQQEQLKASVSNLQEIYDVNRELASATRELAYRTELHAARDNALANLKDMVAIE 175
Query: 123 SIQRRISQKHMVSWVVSHVLKSITPDQDKQSIKKCISDLKALA 165
QR+ Q + +W+ + VLK++ +++ +K+ I+DL+ LA
Sbjct: 176 QSQRQAEQNEIANWIEAEVLKAL-EGKEEALMKQSIADLEDLA 217
>gi|313238651|emb|CBY13680.1| unnamed protein product [Oikopleura dioica]
Length = 71
Score = 37.0 bits (84), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 21/71 (29%), Positives = 37/71 (52%), Gaps = 2/71 (2%)
Query: 96 LEAVFRERALFAYQQVKNRLEYQAALESIQRRISQKHMVSWVVSHVLKSITP-DQDKQSI 154
LE + R V +L YQ A+++ +HM++W+ V + I+ DQD + I
Sbjct: 2 LETEYLNRQNMVVDSVTKKLNYQVAVQNALEDQESQHMINWIEDKVNQDISNLDQD-EMI 60
Query: 155 KKCISDLKALA 165
C+++LK +A
Sbjct: 61 NVCVANLKKMA 71
>gi|149925598|ref|ZP_01913862.1| periplasmic sensor signal transduction histidine kinase
[Limnobacter sp. MED105]
gi|149825715|gb|EDM84923.1| periplasmic sensor signal transduction histidine kinase
[Limnobacter sp. MED105]
Length = 635
Score = 36.6 bits (83), Expect = 3.3, Method: Composition-based stats.
Identities = 24/91 (26%), Positives = 45/91 (49%), Gaps = 7/91 (7%)
Query: 79 KAQAVLYEAKRENIQMQLEAVFRERALFAYQQVKNRLEYQAALESIQRRISQ-------K 131
+ +A+L E K N + E RE+ LF + ++E Q A + +RRI Q
Sbjct: 397 RYRALLQELKTSNDSLNSELAIREQQLFRQFNLLRKIEQQRAQDDERRRIMQDIHDGVGS 456
Query: 132 HMVSWVVSHVLKSITPDQDKQSIKKCISDLK 162
+VS + K ++ D+ + +++C+ DL+
Sbjct: 457 SLVSALNLSETKPLSQDEMRDVLQECLDDLR 487
>gi|261187630|ref|XP_002620234.1| transcriptional repressor TUP1 [Ajellomyces dermatitidis SLH14081]
gi|239594125|gb|EEQ76706.1| transcriptional repressor TUP1 [Ajellomyces dermatitidis SLH14081]
gi|327358095|gb|EGE86952.1| transcriptional repressor TUP1 [Ajellomyces dermatitidis ATCC
18188]
Length = 584
Score = 36.6 bits (83), Expect = 3.8, Method: Composition-based stats.
Identities = 20/86 (23%), Positives = 39/86 (45%), Gaps = 3/86 (3%)
Query: 46 MYQSHRAGKIRTNDKLASLKGAIENELWNQERSKAQAVLYEAKRENIQMQLEAVFRERAL 105
MY HR N +L L + E NQ RS + +E + ++E + ++
Sbjct: 1 MYNPHRGMVAAPNSRLTELLDQLRQEYENQSRSTGE---FEHQLTGQLQEMEMIRQKVYQ 57
Query: 106 FAYQQVKNRLEYQAALESIQRRISQK 131
Q+K + EY+A + +++R + +
Sbjct: 58 LEQAQIKMKQEYEAEIRTLRRELESR 83
>gi|239608895|gb|EEQ85882.1| transcriptional repressor TUP1 [Ajellomyces dermatitidis ER-3]
Length = 646
Score = 36.6 bits (83), Expect = 4.0, Method: Composition-based stats.
Identities = 20/86 (23%), Positives = 39/86 (45%), Gaps = 3/86 (3%)
Query: 46 MYQSHRAGKIRTNDKLASLKGAIENELWNQERSKAQAVLYEAKRENIQMQLEAVFRERAL 105
MY HR N +L L + E NQ RS + +E + ++E + ++
Sbjct: 1 MYNPHRGMVAAPNSRLTELLDQLRQEYENQSRSTGE---FEHQLTGQLQEMEMIRQKVYQ 57
Query: 106 FAYQQVKNRLEYQAALESIQRRISQK 131
Q+K + EY+A + +++R + +
Sbjct: 58 LEQAQIKMKQEYEAEIRTLRRELESR 83
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.320 0.128 0.368
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 2,235,208,071
Number of Sequences: 23463169
Number of extensions: 70137413
Number of successful extensions: 230383
Number of sequences better than 100.0: 213
Number of HSP's better than 100.0 without gapping: 189
Number of HSP's successfully gapped in prelim test: 24
Number of HSP's that attempted gapping in prelim test: 230182
Number of HSP's gapped (non-prelim): 217
length of query: 168
length of database: 8,064,228,071
effective HSP length: 128
effective length of query: 40
effective length of database: 9,355,909,735
effective search space: 374236389400
effective search space used: 374236389400
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 71 (32.0 bits)