BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy6813
(758 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|P27008|PARP1_RAT Poly [ADP-ribose] polymerase 1 OS=Rattus norvegicus GN=Parp1 PE=1
SV=4
Length = 1014
Score = 346 bits (888), Expect = 3e-94, Method: Compositional matrix adjust.
Identities = 189/423 (44%), Positives = 257/423 (60%), Gaps = 55/423 (13%)
Query: 338 LDVKY-EDTSKSKKVKVEPMDIECSLEKPVAALVELLFDEKAMTATLKEYELDMDRMPLG 396
L++ Y +D KK+ V+P + L KPV LV ++FD ++M L EYE+D+ +MPLG
Sbjct: 641 LEIDYGQDEEAVKKLAVKP-GTKSKLPKPVQELVGMIFDVESMKKALVEYEIDLQKMPLG 699
Query: 397 KLSAKHLAQGYSILNEVISVLDRNAEADVKDRLILTLTNSFYTHIPHSFGLADPPLLDNK 456
KLS + + YSIL+EV + + + + IL L+N FYT IPH FG+ PPLL+N
Sbjct: 700 KLSRRQIQAAYSILSEVQQAVSQGSS----ESQILDLSNRFYTLIPHDFGMKKPPLLNNT 755
Query: 457 QLVVQKMEMIDAMTQIELAYTIKQEGPS-AGVHPLVNCYEKLQANIKSVDTSHPHYEIIH 515
V K+EM+D + IE+AY++ + G + P+ YEKL+ +IK VD E+I
Sbjct: 756 DSVQAKVEMLDNLLDIEVAYSLLRGGSDDSSKDPIDVNYEKLKTDIKVVDRDSEEAEVIR 815
Query: 516 KYVQNTHAKTHREYSLNIEAIFEVSRHGEDKRFKPFEKLGNKHLLWHGSRLTNFASIISK 575
KYV+NTHA TH Y L + IF++ R GE +R+KPF +L N+ LLWHGSR TNFA I+S+
Sbjct: 816 KYVKNTHATTHNAYDLEVIDIFKIEREGESQRYKPFRQLHNRRLLWHGSRTTNFAGILSQ 875
Query: 576 GLCIAPPEAPVTGYMFGKGIYFADSVSKSANYCMTNSTNNVGLLLLCEVALGKVVLRYMF 635
GL IAPPEAPVTGYMFGKGIYFAD VSKSANYC T+ + +GL+LL EVALG +
Sbjct: 876 GLRIAPPEAPVTGYMFGKGIYFADMVSKSANYCHTSQGDPIGLILLGEVALGNM------ 929
Query: 636 GKGIYFADSVSKSANYCMTNSTNNVGLLLLCEVALGKVVKKTQAEFVTKLPNGFHSVQGQ 695
Y + ++++ ++KLP G HSV+G
Sbjct: 930 ---------------YELKHASH-----------------------ISKLPKGKHSVKGL 951
Query: 696 GRNCPDPKGSIVLDNNITVPLGTLIDLPRDQAKNLSLLYNEFIVYDPAQVKIRYILKVRF 755
G+ PDP SI LD + VPLGT I + LLYNE+IVYD AQV ++Y+LK++F
Sbjct: 952 GKTAPDPSASITLD-GVEVPLGTGIP---SGVNDTCLLYNEYIVYDIAQVNLKYLLKLKF 1007
Query: 756 NYK 758
N+K
Sbjct: 1008 NFK 1010
Score = 124 bits (311), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 96/306 (31%), Positives = 152/306 (49%), Gaps = 26/306 (8%)
Query: 36 VMVQINARIGEAKDVKLKSQEKSVFKSKSGTVKLQIKDGLAVDPDSGLADTTELVKYFDD 95
V+V +K K +E+ V KS+ +KL +K G AVDPDSGL + +++
Sbjct: 493 VVVPKGKSAAPSKKSKGAVKEEGVNKSEK-RMKLTLKGGAAVDPDSGLEHSAHVLEK-GG 550
Query: 96 RYLNAVMGKTDVAAGKNSFYKLQVLKSKIHKEKYYLFRAWGRIGTSIGGTKVQDFKDVES 155
+ +A +G D+ G NS+YKLQ+L+S + +Y++FR+WGR+GT IG K++ E
Sbjct: 551 KVFSATLGLVDIVKGTNSYYKLQLLESD-KESRYWIFRSWGRVGTVIGSNKLEQMPSKED 609
Query: 156 AFDEFDRCFEKETGNTSGKDAKQKLTASILRLGGDTVSDVRSHVAAAIATKAAVENMEEG 215
A + F + +E++TGN K L D D +A K ++
Sbjct: 610 AVEHFMKLYEEKTGNAWHSKNFTKYPKKFYPLEIDYGQD--EEAVKKLAVKPGTKS---- 663
Query: 216 GKGARAMEELKEYGIHVVPSKFIKDAANGKVLELIEKMNLAPWGSDDSAKHLAQGYSILN 275
K + ++EL V F ++ ++E + P G S + + YSIL+
Sbjct: 664 -KLPKPVQEL-------VGMIFDVESMKKALVEYEIDLQKMPLGK-LSRRQIQAAYSILS 714
Query: 276 EVISVLDRNAEADVKDRLILTLTNSFYTHIPHSFGLADPPLLDNKQLVVQKMEMIDAMTQ 335
EV + + + + IL L+N FYT IPH FG+ PPLL+N V K+EM+D
Sbjct: 715 EVQQAVSQGSS----ESQILDLSNRFYTLIPHDFGMKKPPLLNNTDSVQAKVEMLD---- 766
Query: 336 KLLDVK 341
LLD++
Sbjct: 767 NLLDIE 772
Score = 42.0 bits (97), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 16/32 (50%), Positives = 24/32 (75%)
Query: 8 FECDYAKSNRAKCKGCKDTIIQGTLRLAVMVQ 39
+ +YAKS RA CK C ++I + +LR+A+MVQ
Sbjct: 9 YRVEYAKSGRASCKKCSESIPKDSLRMAIMVQ 40
Score = 39.3 bits (90), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 15/28 (53%), Positives = 21/28 (75%)
Query: 8 FECDYAKSNRAKCKGCKDTIIQGTLRLA 35
F +YAKSNR+ CKGC + I +G +RL+
Sbjct: 113 FAAEYAKSNRSTCKGCMEKIEKGQMRLS 140
>sp|P09874|PARP1_HUMAN Poly [ADP-ribose] polymerase 1 OS=Homo sapiens GN=PARP1 PE=1 SV=4
Length = 1014
Score = 346 bits (888), Expect = 3e-94, Method: Compositional matrix adjust.
Identities = 189/423 (44%), Positives = 259/423 (61%), Gaps = 55/423 (13%)
Query: 338 LDVKY-EDTSKSKKVKVEPMDIECSLEKPVAALVELLFDEKAMTATLKEYELDMDRMPLG 396
L++ Y +D KK+ V P + L KPV L++++FD ++M + EYE+D+ +MPLG
Sbjct: 641 LEIDYGQDEEAVKKLTVNP-GTKSKLPKPVQDLIKMIFDVESMKKAMVEYEIDLQKMPLG 699
Query: 397 KLSAKHLAQGYSILNEVISVLDRNAEADVKDRLILTLTNSFYTHIPHSFGLADPPLLDNK 456
KLS + + YSIL+EV + + + D IL L+N FYT IPH FG+ PPLL+N
Sbjct: 700 KLSKRQIQAAYSILSEVQQAVSQGSS----DSQILDLSNRFYTLIPHDFGMKKPPLLNNA 755
Query: 457 QLVVQKMEMIDAMTQIELAYTIKQEGPS-AGVHPLVNCYEKLQANIKSVDTSHPHYEIIH 515
V K+EM+D + IE+AY++ + G + P+ YEKL+ +IK VD EII
Sbjct: 756 DSVQAKVEMLDNLLDIEVAYSLLRGGSDDSSKDPIDVNYEKLKTDIKVVDRDSEEAEIIR 815
Query: 516 KYVQNTHAKTHREYSLNIEAIFEVSRHGEDKRFKPFEKLGNKHLLWHGSRLTNFASIISK 575
KYV+NTHA TH Y L + IF++ R GE +R+KPF++L N+ LLWHGSR TNFA I+S+
Sbjct: 816 KYVKNTHATTHNAYDLEVIDIFKIEREGECQRYKPFKQLHNRRLLWHGSRTTNFAGILSQ 875
Query: 576 GLCIAPPEAPVTGYMFGKGIYFADSVSKSANYCMTNSTNNVGLLLLCEVALGKVVLRYMF 635
GL IAPPEAPVTGYMFGKGIYFAD VSKSANYC T+ + +GL+LL EVALG +
Sbjct: 876 GLRIAPPEAPVTGYMFGKGIYFADMVSKSANYCHTSQGDPIGLILLGEVALGNM------ 929
Query: 636 GKGIYFADSVSKSANYCMTNSTNNVGLLLLCEVALGKVVKKTQAEFVTKLPNGFHSVQGQ 695
Y + ++++ ++KLP G HSV+G
Sbjct: 930 ---------------YELKHASH-----------------------ISKLPKGKHSVKGL 951
Query: 696 GRNCPDPKGSIVLDNNITVPLGTLIDLPRDQAKNLSLLYNEFIVYDPAQVKIRYILKVRF 755
G+ PDP +I LD + VPLGT I + SLLYNE+IVYD AQV ++Y+LK++F
Sbjct: 952 GKTTPDPSANISLD-GVDVPLGTGIS---SGVNDTSLLYNEYIVYDIAQVNLKYLLKLKF 1007
Query: 756 NYK 758
N+K
Sbjct: 1008 NFK 1010
Score = 123 bits (308), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 93/295 (31%), Positives = 149/295 (50%), Gaps = 26/295 (8%)
Query: 47 AKDVKLKSQEKSVFKSKSGTVKLQIKDGLAVDPDSGLADTTELVKYFDDRYLNAVMGKTD 106
+K K + +E+ + KS+ +KL +K G AVDPDSGL + +++ + +A +G D
Sbjct: 504 SKKSKGQVKEEGINKSEK-RMKLTLKGGAAVDPDSGLEHSAHVLEK-GGKVFSATLGLVD 561
Query: 107 VAAGKNSFYKLQVLKSKIHKEKYYLFRAWGRIGTSIGGTKVQDFKDVESAFDEFDRCFEK 166
+ G NS+YKLQ+L+ + +Y++FR+WGR+GT IG K++ E A + F + +E+
Sbjct: 562 IVKGTNSYYKLQLLEDD-KENRYWIFRSWGRVGTVIGSNKLEQMPSKEDAIEHFMKLYEE 620
Query: 167 ETGNTSGKDAKQKLTASILRLGGDTVSDVRSHVAAAIATKAAVENMEEGGKGARAMEELK 226
+TGN K L D D A K N K + +++L
Sbjct: 621 KTGNAWHSKNFTKYPKKFYPLEIDYGQDEE-------AVKKLTVNPGTKSKLPKPVQDL- 672
Query: 227 EYGIHVVPSKFIKDAANGKVLELIEKMNLAPWGSDDSAKHLAQGYSILNEVISVLDRNAE 286
I ++ F ++ ++E + P G S + + YSIL+EV + + +
Sbjct: 673 ---IKMI---FDVESMKKAMVEYEIDLQKMPLGK-LSKRQIQAAYSILSEVQQAVSQGSS 725
Query: 287 ADVKDRLILTLTNSFYTHIPHSFGLADPPLLDNKQLVVQKMEMIDAMTQKLLDVK 341
D IL L+N FYT IPH FG+ PPLL+N V K+EM+D LLD++
Sbjct: 726 ----DSQILDLSNRFYTLIPHDFGMKKPPLLNNADSVQAKVEMLD----NLLDIE 772
Score = 42.4 bits (98), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 17/34 (50%), Positives = 25/34 (73%)
Query: 6 KPFECDYAKSNRAKCKGCKDTIIQGTLRLAVMVQ 39
K + +YAKS RA CK C ++I + +LR+A+MVQ
Sbjct: 7 KLYRVEYAKSGRASCKKCSESIPKDSLRMAIMVQ 40
Score = 41.2 bits (95), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 29/87 (33%), Positives = 46/87 (52%), Gaps = 9/87 (10%)
Query: 177 KQKLTASILRLGGDTVSDVRSHVAAAIATKAAVENMEEGGKGARAMEELKEYGIHVVPSK 236
K ++ A I +LGG ++ + + I+TK VE M + MEE+KE I VV
Sbjct: 405 KDEVKAMIEKLGG-KLTGTANKASLCISTKKEVEKMN------KKMEEVKEANIRVVSED 457
Query: 237 FIKD--AANGKVLELIEKMNLAPWGSD 261
F++D A+ + EL L+PWG++
Sbjct: 458 FLQDVSASTKSLQELFLAHILSPWGAE 484
Score = 38.9 bits (89), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 15/28 (53%), Positives = 21/28 (75%)
Query: 8 FECDYAKSNRAKCKGCKDTIIQGTLRLA 35
F +YAKSNR+ CKGC + I +G +RL+
Sbjct: 113 FAAEYAKSNRSTCKGCMEKIEKGQVRLS 140
>sp|P18493|PARP1_BOVIN Poly [ADP-ribose] polymerase 1 OS=Bos taurus GN=PARP1 PE=2 SV=2
Length = 1016
Score = 345 bits (884), Expect = 9e-94, Method: Compositional matrix adjust.
Identities = 188/423 (44%), Positives = 253/423 (59%), Gaps = 55/423 (13%)
Query: 338 LDVKY-EDTSKSKKVKVEPMDIECSLEKPVAALVELLFDEKAMTATLKEYELDMDRMPLG 396
L++ Y +D KK+ V P + L KPV L++++FD ++M + EYE+D+ +MPLG
Sbjct: 643 LEIDYGQDEEAVKKLTVNP-GTKSKLPKPVQNLIKMIFDVESMKKAMVEYEIDLQKMPLG 701
Query: 397 KLSAKHLAQGYSILNEVISVLDRNAEADVKDRLILTLTNSFYTHIPHSFGLADPPLLDNK 456
KLS + + YSIL+EV L + + D IL L+N FYT IPH FG+ PPLL+N
Sbjct: 702 KLSKRQIQAAYSILSEVQQALSQGSS----DSHILDLSNRFYTLIPHDFGMKKPPLLNNA 757
Query: 457 QLVVQKMEMIDAMTQIELAYTIKQEGPS-AGVHPLVNCYEKLQANIKSVDTSHPHYEIIH 515
V K+EM+D + IE+AY++ + G + P+ YEKL+ +IK VD EII
Sbjct: 758 NSVQAKVEMLDNLLDIEVAYSLLRGGSDDSSKDPIDVNYEKLKTDIKVVDKDSEEAEIIR 817
Query: 516 KYVQNTHAKTHREYSLNIEAIFEVSRHGEDKRFKPFEKLGNKHLLWHGSRLTNFASIISK 575
KYV+NTHA TH Y L + IF++ R GE +R+KPF++L N+ LLWHGSR TNFA I+S+
Sbjct: 818 KYVKNTHATTHNAYDLEVVDIFKIEREGESQRYKPFKQLHNRRLLWHGSRTTNFAGILSQ 877
Query: 576 GLCIAPPEAPVTGYMFGKGIYFADSVSKSANYCMTNSTNNVGLLLLCEVALGKVVLRYMF 635
GL IAPPEAPVTGYMFGKGIYFAD VSKSANYC T+ + +GL+LL E AL
Sbjct: 878 GLRIAPPEAPVTGYMFGKGIYFADMVSKSANYCHTSQGDPIGLILLGEAAL--------- 928
Query: 636 GKGIYFADSVSKSANYCMTNSTNNVGLLLLCEVALGKVVKKTQAEFVTKLPNGFHSVQGQ 695
G + + A ++KLP G HSV+G
Sbjct: 929 -----------------------------------GNMYELKHARHISKLPKGKHSVKGL 953
Query: 696 GRNCPDPKGSIVLDNNITVPLGTLIDLPRDQAKNLSLLYNEFIVYDPAQVKIRYILKVRF 755
G+ PDP SI +D + VPLGT I + LLYNE+IVYD AQV ++Y+LK++F
Sbjct: 954 GKTTPDPSASITVD-GVEVPLGTGIS---SGVNDTCLLYNEYIVYDIAQVHLKYLLKLKF 1009
Query: 756 NYK 758
N+K
Sbjct: 1010 NFK 1012
Score = 121 bits (304), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 89/275 (32%), Positives = 136/275 (49%), Gaps = 25/275 (9%)
Query: 67 VKLQIKDGLAVDPDSGLADTTELVKYFDDRYLNAVMGKTDVAAGKNSFYKLQVLKSKIHK 126
+KL +K G AVDPDSGL +++ + +A +G D+ G NS+YKLQ+L+ +
Sbjct: 525 MKLTLKGGAAVDPDSGLEHNAHVLEK-GGKVFSATLGLVDIVKGTNSYYKLQLLEDD-KE 582
Query: 127 EKYYLFRAWGRIGTSIGGTKVQDFKDVESAFDEFDRCFEKETGNTSGKDAKQKLTASILR 186
+Y++FR+WGR+GT IG K++ E A + F + +E++TGN K
Sbjct: 583 SRYWIFRSWGRVGTVIGSNKLEQMPSKEDAIEHFMKLYEEKTGNAWHSKNFTKHPKKFYP 642
Query: 187 LGGDTVSDVRSHVAAAIATKAAVENMEEGGKGARAMEELKEYGIHVVPSKFIKDAANGKV 246
L D D A K N K + ++ L I ++ F ++ +
Sbjct: 643 LEIDYGQDEE-------AVKKLTVNPGTKSKLPKPVQNL----IKMI---FDVESMKKAM 688
Query: 247 LELIEKMNLAPWGSDDSAKHLAQGYSILNEVISVLDRNAEADVKDRLILTLTNSFYTHIP 306
+E + P G S + + YSIL+EV L + + D IL L+N FYT IP
Sbjct: 689 VEYEIDLQKMPLGK-LSKRQIQAAYSILSEVQQALSQGSS----DSHILDLSNRFYTLIP 743
Query: 307 HSFGLADPPLLDNKQLVVQKMEMIDAMTQKLLDVK 341
H FG+ PPLL+N V K+EM+D LLD++
Sbjct: 744 HDFGMKKPPLLNNANSVQAKVEMLD----NLLDIE 774
Score = 41.6 bits (96), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 27/87 (31%), Positives = 48/87 (55%), Gaps = 9/87 (10%)
Query: 177 KQKLTASILRLGGDTVSDVRSHVAAAIATKAAVENMEEGGKGARAMEELKEYGIHVVPSK 236
K ++ A+I +LGG ++ + + I+TK V+ + + MEE+KE I VV
Sbjct: 407 KDEVKATIEKLGG-KLTGTANKASLCISTKKEVDKLN------KKMEEVKEANIRVVSED 459
Query: 237 FIKD--AANGKVLELIEKMNLAPWGSD 261
F++D A+ + EL+ L+PWG++
Sbjct: 460 FLQDISASTKSLQELLSTHLLSPWGAE 486
Score = 40.4 bits (93), Expect = 0.058, Method: Compositional matrix adjust.
Identities = 16/34 (47%), Positives = 25/34 (73%)
Query: 6 KPFECDYAKSNRAKCKGCKDTIIQGTLRLAVMVQ 39
K + +YAKS RA CK CK++I + ++R+A MV+
Sbjct: 7 KLYRVEYAKSGRASCKKCKESIPKDSIRMAFMVE 40
Score = 35.0 bits (79), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 15/31 (48%), Positives = 20/31 (64%)
Query: 8 FECDYAKSNRAKCKGCKDTIIQGTLRLAVMV 38
F YAKSNR+ CK C + I +G +RL+ V
Sbjct: 116 FGAGYAKSNRSTCKSCMEKIDKGQVRLSKKV 146
>sp|P11103|PARP1_MOUSE Poly [ADP-ribose] polymerase 1 OS=Mus musculus GN=Parp1 PE=1 SV=3
Length = 1013
Score = 343 bits (881), Expect = 2e-93, Method: Compositional matrix adjust.
Identities = 187/423 (44%), Positives = 257/423 (60%), Gaps = 55/423 (13%)
Query: 338 LDVKY-EDTSKSKKVKVEPMDIECSLEKPVAALVELLFDEKAMTATLKEYELDMDRMPLG 396
L++ Y +D KK+ V+P + L KPV LV ++FD +M L EYE+D+ +MPLG
Sbjct: 640 LEIDYGQDEEAVKKLTVKP-GTKSKLPKPVQELVGMIFDVDSMKKALVEYEIDLQKMPLG 698
Query: 397 KLSAKHLAQGYSILNEVISVLDRNAEADVKDRLILTLTNSFYTHIPHSFGLADPPLLDNK 456
KLS + + YSIL+EV + + + + IL L+N FYT IPH FG+ PPLL+N
Sbjct: 699 KLSRRQIQAAYSILSEVQQPVSQGSS----ESQILDLSNRFYTLIPHDFGMKKPPLLNNA 754
Query: 457 QLVVQKMEMIDAMTQIELAYTIKQEGPS-AGVHPLVNCYEKLQANIKSVDTSHPHYEIIH 515
V K+EM+D + IE+AY++ + G + P+ YEKL+ +IK VD E+I
Sbjct: 755 DSVQAKVEMLDNLLDIEVAYSLLRGGSDDSSKDPIDVNYEKLKTDIKVVDRDSEEAEVIR 814
Query: 516 KYVQNTHAKTHREYSLNIEAIFEVSRHGEDKRFKPFEKLGNKHLLWHGSRLTNFASIISK 575
KYV+NTHA TH Y L + IF++ R GE +R+KPF +L N+ LLWHGSR TNFA I+S+
Sbjct: 815 KYVKNTHATTHNAYDLEVIDIFKIEREGESQRYKPFRQLHNRRLLWHGSRTTNFAGILSQ 874
Query: 576 GLCIAPPEAPVTGYMFGKGIYFADSVSKSANYCMTNSTNNVGLLLLCEVALGKVVLRYMF 635
GL IAPPEAPVTGYMFGKGIYFAD VSKSANYC T+ + +GL++L EVALG +
Sbjct: 875 GLRIAPPEAPVTGYMFGKGIYFADMVSKSANYCHTSQGDPIGLIMLGEVALGNM------ 928
Query: 636 GKGIYFADSVSKSANYCMTNSTNNVGLLLLCEVALGKVVKKTQAEFVTKLPNGFHSVQGQ 695
Y + ++++ ++KLP G HSV+G
Sbjct: 929 ---------------YELKHASH-----------------------ISKLPKGKHSVKGL 950
Query: 696 GRNCPDPKGSIVLDNNITVPLGTLIDLPRDQAKNLSLLYNEFIVYDPAQVKIRYILKVRF 755
G+ PDP SI L+ + VPLGT I + +LLYNE+IVYD AQV ++Y+LK++F
Sbjct: 951 GKTTPDPSASITLE-GVEVPLGTGIP---SGVNDTALLYNEYIVYDIAQVNLKYLLKLKF 1006
Query: 756 NYK 758
N+K
Sbjct: 1007 NFK 1009
Score = 122 bits (306), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 91/287 (31%), Positives = 145/287 (50%), Gaps = 26/287 (9%)
Query: 55 QEKSVFKSKSGTVKLQIKDGLAVDPDSGLADTTELVKYFDDRYLNAVMGKTDVAAGKNSF 114
+E+ V KS+ +KL +K G AVDPDSGL + +++ + +A +G D+ G NS+
Sbjct: 511 KEEGVNKSEK-RMKLTLKGGAAVDPDSGLEHSAHVLEK-GGKVFSATLGLVDIVKGTNSY 568
Query: 115 YKLQVLKSKIHKEKYYLFRAWGRIGTSIGGTKVQDFKDVESAFDEFDRCFEKETGNTSGK 174
YKLQ+L+ + +Y++FR+WGR+GT IG K++ E A ++F + +E++TGN
Sbjct: 569 YKLQLLEDD-KESRYWIFRSWGRLGTVIGSNKLEQMPSKEEAVEQFMKLYEEKTGNAWHS 627
Query: 175 DAKQKLTASILRLGGDTVSDVRSHVAAAIATKAAVENMEEGGKGARAMEELKEYGIHVVP 234
K L D D + K ++ K + ++EL V
Sbjct: 628 KNFTKYPKKFYPLEIDYGQD--EEAVKKLTVKPGTKS-----KLPKPVQEL-------VG 673
Query: 235 SKFIKDAANGKVLELIEKMNLAPWGSDDSAKHLAQGYSILNEVISVLDRNAEADVKDRLI 294
F D+ ++E + P G S + + YSIL+EV + + + + I
Sbjct: 674 MIFDVDSMKKALVEYEIDLQKMPLGK-LSRRQIQAAYSILSEVQQPVSQGSS----ESQI 728
Query: 295 LTLTNSFYTHIPHSFGLADPPLLDNKQLVVQKMEMIDAMTQKLLDVK 341
L L+N FYT IPH FG+ PPLL+N V K+EM+D LLD++
Sbjct: 729 LDLSNRFYTLIPHDFGMKKPPLLNNADSVQAKVEMLD----NLLDIE 771
Score = 41.6 bits (96), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 16/32 (50%), Positives = 23/32 (71%)
Query: 8 FECDYAKSNRAKCKGCKDTIIQGTLRLAVMVQ 39
+ YAKS RA CK C ++I + +LR+A+MVQ
Sbjct: 9 YRVQYAKSGRASCKKCSESIPKDSLRMAIMVQ 40
Score = 39.3 bits (90), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 27/87 (31%), Positives = 44/87 (50%), Gaps = 9/87 (10%)
Query: 177 KQKLTASILRLGGDTVSDVRSHVAAAIATKAAVENMEEGGKGARAMEELKEYGIHVVPSK 236
K + A I +LGG + + I+ K VE M + MEE+KE I VV
Sbjct: 405 KDEAKAVIEKLGGKLTGSA-NKASLCISIKKEVEKMN------KKMEEVKEANIRVVSED 457
Query: 237 FIKD--AANGKVLELIEKMNLAPWGSD 261
F++D A+ + +L+ +L+PWG++
Sbjct: 458 FLQDVSASTKSLQDLLSAHSLSPWGAE 484
Score = 38.9 bits (89), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 15/28 (53%), Positives = 21/28 (75%)
Query: 8 FECDYAKSNRAKCKGCKDTIIQGTLRLA 35
F +YAKSNR+ CKGC + I +G +RL+
Sbjct: 113 FAAEYAKSNRSMCKGCLEKIEKGQMRLS 140
>sp|Q9R152|PARP1_CRIGR Poly [ADP-ribose] polymerase 1 OS=Cricetulus griseus GN=PARP1 PE=2
SV=3
Length = 1013
Score = 343 bits (880), Expect = 3e-93, Method: Compositional matrix adjust.
Identities = 188/423 (44%), Positives = 257/423 (60%), Gaps = 55/423 (13%)
Query: 338 LDVKY-EDTSKSKKVKVEPMDIECSLEKPVAALVELLFDEKAMTATLKEYELDMDRMPLG 396
L++ Y +D KK+ V+P + L K V LV ++FD ++M L EYE+D+ +MPLG
Sbjct: 640 LEIDYGQDEEAVKKLTVKP-GTKSKLPKAVQELVGMIFDVESMKKALVEYEIDLQKMPLG 698
Query: 397 KLSAKHLAQGYSILNEVISVLDRNAEADVKDRLILTLTNSFYTHIPHSFGLADPPLLDNK 456
KLS + + YSIL+EV + + + D IL L+N FYT IPH FG+ PPLL+N
Sbjct: 699 KLSKRQIQAAYSILSEVQQAVSQGSS----DSQILDLSNRFYTLIPHDFGMKKPPLLNNA 754
Query: 457 QLVVQKMEMIDAMTQIELAYTIKQEGPS-AGVHPLVNCYEKLQANIKSVDTSHPHYEIIH 515
V K+EM+D + IE+AY++ + G + P+ YEKL+ +IK VD E+I
Sbjct: 755 DSVQAKVEMLDNLLDIEVAYSLLRGGSDDSSKDPIDVNYEKLKTDIKVVDRDSEEAEVIR 814
Query: 516 KYVQNTHAKTHREYSLNIEAIFEVSRHGEDKRFKPFEKLGNKHLLWHGSRLTNFASIISK 575
KYV+NTHA TH Y L + IF++ R GE +R+KPF++L N+ LLWHGSR TNFA I+S+
Sbjct: 815 KYVKNTHATTHNAYDLEVMDIFKIEREGESQRYKPFKQLHNRRLLWHGSRTTNFAGILSQ 874
Query: 576 GLCIAPPEAPVTGYMFGKGIYFADSVSKSANYCMTNSTNNVGLLLLCEVALGKVVLRYMF 635
GL IAPPEAPVTGYMFGKGIYFAD VSKSANYC T+ + +GL+LL EVALG +
Sbjct: 875 GLRIAPPEAPVTGYMFGKGIYFADMVSKSANYCHTSQGDPIGLILLGEVALGNM------ 928
Query: 636 GKGIYFADSVSKSANYCMTNSTNNVGLLLLCEVALGKVVKKTQAEFVTKLPNGFHSVQGQ 695
Y + ++++ ++KLP G HSV+G
Sbjct: 929 ---------------YELKHASH-----------------------ISKLPKGKHSVKGL 950
Query: 696 GRNCPDPKGSIVLDNNITVPLGTLIDLPRDQAKNLSLLYNEFIVYDPAQVKIRYILKVRF 755
G+ PDP SI L+ + VPLGT I + LLYNE+IVYD AQV ++Y+LK++F
Sbjct: 951 GKTTPDPSASITLE-GVEVPLGTGIP---SGVNDTCLLYNEYIVYDIAQVNLKYLLKLKF 1006
Query: 756 NYK 758
N+K
Sbjct: 1007 NFK 1009
Score = 124 bits (311), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 92/287 (32%), Positives = 145/287 (50%), Gaps = 26/287 (9%)
Query: 55 QEKSVFKSKSGTVKLQIKDGLAVDPDSGLADTTELVKYFDDRYLNAVMGKTDVAAGKNSF 114
+E+ V KS+ +KL +K G AVDPDSGL + +++ + +A +G D+ G NS+
Sbjct: 511 KEEGVNKSEK-RMKLTLKGGAAVDPDSGLEHSAHVLEK-GGKVFSATLGLVDIVKGTNSY 568
Query: 115 YKLQVLKSKIHKEKYYLFRAWGRIGTSIGGTKVQDFKDVESAFDEFDRCFEKETGNTSGK 174
YKLQ+L+ + +Y++FR+WGR+GT IG K++ E A + F + +E++TGN
Sbjct: 569 YKLQLLEDD-KESRYWIFRSWGRVGTVIGSNKLEQMPSKEDAVEHFMKLYEEKTGNAWHS 627
Query: 175 DAKQKLTASILRLGGDTVSDVRSHVAAAIATKAAVENMEEGGKGARAMEELKEYGIHVVP 234
K L D D + K ++ K +A++EL V
Sbjct: 628 KNFTKYPKKFYPLEIDYGQD--EEAVKKLTVKPGTKS-----KLPKAVQEL-------VG 673
Query: 235 SKFIKDAANGKVLELIEKMNLAPWGSDDSAKHLAQGYSILNEVISVLDRNAEADVKDRLI 294
F ++ ++E + P G S + + YSIL+EV + + + D I
Sbjct: 674 MIFDVESMKKALVEYEIDLQKMPLGK-LSKRQIQAAYSILSEVQQAVSQGSS----DSQI 728
Query: 295 LTLTNSFYTHIPHSFGLADPPLLDNKQLVVQKMEMIDAMTQKLLDVK 341
L L+N FYT IPH FG+ PPLL+N V K+EM+D LLD++
Sbjct: 729 LDLSNRFYTLIPHDFGMKKPPLLNNADSVQAKVEMLD----NLLDIE 771
Score = 42.0 bits (97), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 16/32 (50%), Positives = 24/32 (75%)
Query: 8 FECDYAKSNRAKCKGCKDTIIQGTLRLAVMVQ 39
+ +YAKS RA CK C ++I + +LR+A+MVQ
Sbjct: 9 YRVEYAKSGRASCKKCSESIPKDSLRMAIMVQ 40
Score = 38.9 bits (89), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 15/28 (53%), Positives = 21/28 (75%)
Query: 8 FECDYAKSNRAKCKGCKDTIIQGTLRLA 35
F +YAKSNR+ CKGC + I +G +RL+
Sbjct: 113 FAAEYAKSNRSTCKGCMEKIEKGQVRLS 140
>sp|Q11208|PARP_SARPE Poly [ADP-ribose] polymerase OS=Sarcophaga peregrina PE=1 SV=1
Length = 996
Score = 342 bits (876), Expect = 1e-92, Method: Compositional matrix adjust.
Identities = 179/403 (44%), Positives = 249/403 (61%), Gaps = 52/403 (12%)
Query: 357 DIECSLEKPVAALVELLFDEKAMTATLKEYELDMDRMPLGKLSAKHLAQGYSILNEVISV 416
DI+ L V +++L+FD +M T+ E++LDM++MPLGKLS K + Y +L E+ +
Sbjct: 645 DIKSKLPLSVQDIIKLMFDVDSMKRTMMEFDLDMEKMPLGKLSQKQIQSAYKVLTEIYEL 704
Query: 417 LDRNAEADVKDRLILTLTNSFYTHIPHSFGLADPPLLDNKQLVVQKMEMIDAMTQIELAY 476
+ + + + TN FYT IPH+FG PPLLD + V Q +M+D++ +IE AY
Sbjct: 705 I----QGGGTNAKFIDATNRFYTLIPHNFGTQSPPLLDTTEQVEQLRQMLDSLIEIECAY 760
Query: 477 TIKQ-EGPSAGVHPLVNCYEKLQANIKSVDTSHPHYEIIHKYVQNTHAKTHREYSLNIEA 535
++ Q E A ++P+ YE+L+ ++ +D + Y ++ KYV+NTHA+TH+ Y L +
Sbjct: 761 SLLQTEDSKADINPIDKHYEQLKTKLEPLDKNSEEYILLQKYVKNTHAETHKLYDLEVVD 820
Query: 536 IFEVSRHGEDKRFKPFEKLGNKHLLWHGSRLTNFASIISKGLCIAPPEAPVTGYMFGKGI 595
IF+V+R GE +R+KPF+KL N+ LLWHGSRLTNFA I+S GL IAPPEAPVTGYMFGKGI
Sbjct: 821 IFKVARQGEARRYKPFKKLHNRRLLWHGSRLTNFAGILSHGLKIAPPEAPVTGYMFGKGI 880
Query: 596 YFADSVSKSANYCMTNSTNNVGLLLLCEVALGKVVLRYMFGKGIYFADSVSKSANYCMTN 655
YFAD VSKSANYC T+ N+ GL+LL EVALG
Sbjct: 881 YFADMVSKSANYCCTSHHNSTGLMLLSEVALGD--------------------------- 913
Query: 656 STNNVGLLLLCEVALGKVVKKTQAEFVTKLPNGFHSVQGQGRNCPDPKGSIVLDNNITVP 715
++ C T A++VTKLPN HS G+GR P+P SI+ ++ + +P
Sbjct: 914 -------MMEC----------TAAKYVTKLPNDKHSCFGRGRTMPNPSESIIREDGVEIP 956
Query: 716 LGTLIDLPRDQAKNLSLLYNEFIVYDPAQVKIRYILKVRFNYK 758
LG I D K+ SLLYNEFI+YD AQV I+Y+L++ F YK
Sbjct: 957 LGKPI--TNDSLKS-SLLYNEFIIYDIAQVNIQYMLRMNFKYK 996
Score = 134 bits (336), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 94/311 (30%), Positives = 154/311 (49%), Gaps = 36/311 (11%)
Query: 61 KSKSGTVKLQIKDGLAVDPDSGLADTTELVKYFDDRYLNAVMGKTDVAAGKNSFYKLQVL 120
KS ++ L+IKDGLAVDPDSGL D + + N V+G TD+ KNSFYKLQ+L
Sbjct: 502 KSVPKSMTLKIKDGLAVDPDSGLEDVAHVYVSRNKEKYNVVLGITDIQKNKNSFYKLQLL 561
Query: 121 KSKIHKEKYYLFRAWGRIGTSIGGTKVQDFKDVESAFDEFDRCFEKETGNT-SGKDAKQK 179
+S + K ++++FR+WGRIGT+IGG K+ +F ++ A +F + +++GN ++ K
Sbjct: 562 ESDM-KNRFWVFRSWGRIGTTIGGNKLDNFSNLVDAIVQFKELYLEKSGNHFENRENFVK 620
Query: 180 LTASILRLGGDTVSDVRSHVAAAIATKAAVENMEEGGKGARAMEELKEYGIHVVPSKFIK 239
+ + + D D + ++A K+ K ++++ ++ F
Sbjct: 621 VAGRMYPIDIDYAEDSKIDLSAEHDIKS---------KLPLSVQD-------IIKLMFDV 664
Query: 240 DAANGKVLELIEKMNLAPWGSDDSAKHLAQGYSILNEVISVLDRNAEADVKDRLILTLTN 299
D+ ++E M P G S K + Y +L E+ ++ + + + TN
Sbjct: 665 DSMKRTMMEFDLDMEKMPLGK-LSQKQIQSAYKVLTEIYELI----QGGGTNAKFIDATN 719
Query: 300 SFYTHIPHSFGLADPPLLDNKQLVVQKMEMIDAMTQKLLDVKYEDTSKSK---------- 349
FYT IPH+FG PPLLD + V Q +M+D++ + T SK
Sbjct: 720 RFYTLIPHNFGTQSPPLLDTTEQVEQLRQMLDSLIEIECAYSLLQTEDSKADINPIDKHY 779
Query: 350 ---KVKVEPMD 357
K K+EP+D
Sbjct: 780 EQLKTKLEPLD 790
Score = 48.9 bits (115), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 20/33 (60%), Positives = 26/33 (78%)
Query: 7 PFECDYAKSNRAKCKGCKDTIIQGTLRLAVMVQ 39
PF+ +Y+KS+RA CKGCK+ I G LR+A MVQ
Sbjct: 6 PFKVEYSKSSRASCKGCKNKIEAGILRIAAMVQ 38
Score = 38.1 bits (87), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 20/84 (23%), Positives = 39/84 (46%), Gaps = 8/84 (9%)
Query: 184 ILRLGGDTVSDVRSHVAAAIATKAAVENMEEGGKGARAMEELKEYGIHVVPSKFIK--DA 241
I +LGG + + ++T VE M + M++ K G+HV+P +++ +
Sbjct: 408 ISKLGGTVSTKITEKTTVVLSTPEEVERM------SSRMKKAKTLGLHVIPEDYLEAVEQ 461
Query: 242 ANGKVLELIEKMNLAPWGSDDSAK 265
+ I M+L WG+D + +
Sbjct: 462 NGAGAINYISSMSLCDWGTDPATR 485
Score = 35.0 bits (79), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 14/33 (42%), Positives = 21/33 (63%)
Query: 6 KPFECDYAKSNRAKCKGCKDTIIQGTLRLAVMV 38
K F +YAKS RA C+GC+ I++ +R+ V
Sbjct: 112 KDFGIEYAKSGRASCRGCEQKILKDQIRIRKTV 144
>sp|P35875|PARP_DROME Poly [ADP-ribose] polymerase OS=Drosophila melanogaster GN=Parp
PE=2 SV=1
Length = 994
Score = 328 bits (841), Expect = 9e-89, Method: Compositional matrix adjust.
Identities = 177/421 (42%), Positives = 246/421 (58%), Gaps = 54/421 (12%)
Query: 338 LDVKYEDTSKSKKVKVEPMDIECSLEKPVAALVELLFDEKAMTATLKEYELDMDRMPLGK 397
++++Y+D K VK E LE V L++L+FD +M TL E+ +DMD+MPLGK
Sbjct: 625 IEIQYDDDQKL--VKHESHFFTSKLEISVQNLIKLIFDIDSMNKTLMEFHIDMDKMPLGK 682
Query: 398 LSAKHLAQGYSILNEVISVLDRNAEADVKDRLILTLTNSFYTHIPHSFGLADPPLLDNKQ 457
LSA + Y ++ E+ +VL E ++ TN FYT IPH+FG+ P L++ Q
Sbjct: 683 LSAHQIQSAYRVVKEIYNVL----ECGSNTAKLIDATNRFYTLIPHNFGVQLPTLIETHQ 738
Query: 458 LVVQKMEMIDAMTQIELAYTI-KQEGPSAGVHPLVNCYEKLQANIKSVDTSHPHYEIIHK 516
+ +M+D++ +IE+AY+I K E S +PL N Y +++ + ++D + + I+ +
Sbjct: 739 QIEDLRQMLDSLAEIEVAYSIIKSEDVSDACNPLDNHYAQIKTQLVALDKNSEEFSILSQ 798
Query: 517 YVQNTHAKTHREYSLNIEAIFEVSRHGEDKRFKPFEKLGNKHLLWHGSRLTNFASIISKG 576
YV+NTHA TH+ Y L I +F+VSR GE +RFKPF+KL N+ LLWHGSRLTNF I+S G
Sbjct: 799 YVKNTHASTHKSYDLKIVDVFKVSRQGEARRFKPFKKLHNRKLLWHGSRLTNFVGILSHG 858
Query: 577 LCIAPPEAPVTGYMFGKGIYFADSVSKSANYCMTNSTNNVGLLLLCEVALGKVVLRYMFG 636
L IAPPEAP TGYMFGKGIYFAD VSKSANYC T+ N+ GL+LL EVALG
Sbjct: 859 LRIAPPEAPPTGYMFGKGIYFADMVSKSANYCCTSQQNSTGLMLLSEVALGD-------- 910
Query: 637 KGIYFADSVSKSANYCMTNSTNNVGLLLLCEVALGKVVKKTQAEFVTKLPNGFHSVQGQG 696
++ C T A+++ KL N HS G+G
Sbjct: 911 --------------------------MMEC----------TSAKYINKLSNNKHSCFGRG 934
Query: 697 RNCPDPKGSIVLDNNITVPLGTLIDLPRDQAKNLSLLYNEFIVYDPAQVKIRYILKVRFN 756
R PDP S + + + +P G I D+ SLLYNE+IVYD AQV I+Y+ ++ F
Sbjct: 935 RTMPDPTKSYIRSDGVEIPYGETI---TDEHLKSSLLYNEYIVYDVAQVNIQYLFRMEFK 991
Query: 757 Y 757
Y
Sbjct: 992 Y 992
Score = 128 bits (322), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 91/287 (31%), Positives = 150/287 (52%), Gaps = 34/287 (11%)
Query: 61 KSKSGTVKLQIKDGLAVDPDSGLADTTELVKYFDDRYLNAVMGKTDVAAGKNSFYKLQVL 120
KS + ++KDGLAVDPDSGL D + +++Y + V+G TD+ KNS+YK+Q+L
Sbjct: 500 KSMPVSRTFKVKDGLAVDPDSGLEDIAHVYVDSNNKY-SVVLGLTDIQRNKNSYYKVQLL 558
Query: 121 KSKIHKEKYYLFRAWGRIGTSIGGTKVQDFKDVESAFDEFDRCFEKETGNT-SGKDAKQK 179
K+ KEKY++FR+WGRIGT+IG +K+++F ESA F + +TGN +D K
Sbjct: 559 KAD-KKEKYWIFRSWGRIGTNIGNSKLEEFDTSESAKRNFKEIYADKTGNEYEQRDNFVK 617
Query: 180 LTASI--LRLGGDTVSDVRSHVAAAIATK--AAVENMEEGGKGARAMEELKEYGIHVVPS 235
T + + + D + H + +K +V+N+ I ++
Sbjct: 618 RTGRMYPIEIQYDDDQKLVKHESHFFTSKLEISVQNL-----------------IKLI-- 658
Query: 236 KFIKDAANGKVLELIEKMNLAPWGSDDSAKHLAQGYSILNEVISVLDRNAEADVKDRLIL 295
F D+ N ++E M+ P G SA + Y ++ E+ +VL E ++
Sbjct: 659 -FDIDSMNKTLMEFHIDMDKMPLGK-LSAHQIQSAYRVVKEIYNVL----ECGSNTAKLI 712
Query: 296 TLTNSFYTHIPHSFGLADPPLLDNKQLVVQKMEMIDAMTQKLLDVKY 342
TN FYT IPH+FG+ P L++ Q + +M+D++ + ++V Y
Sbjct: 713 DATNRFYTLIPHNFGVQLPTLIETHQQIEDLRQMLDSLAE--IEVAY 757
Score = 48.9 bits (115), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 20/33 (60%), Positives = 26/33 (78%)
Query: 7 PFECDYAKSNRAKCKGCKDTIIQGTLRLAVMVQ 39
P+ +YA++ RA CKGCK TI + TLR+AVMVQ
Sbjct: 6 PYLAEYARTGRATCKGCKSTISKDTLRIAVMVQ 38
Score = 35.8 bits (81), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 23/94 (24%), Positives = 45/94 (47%), Gaps = 8/94 (8%)
Query: 174 KDAKQKLTASILRLGGDTVSDVRSHVAAAIATKAAVENMEEGGKGARAMEELKEYGIHVV 233
K+ ++L I LGG + + A I+T+ ++ K + M+ +E GIH+V
Sbjct: 396 KNQHKELRKRIENLGGKFEVKISENTIAIISTELEIQ------KKSTRMKFAEELGIHIV 449
Query: 234 PSKFIK--DAANGKVLELIEKMNLAPWGSDDSAK 265
P +F+ +A ++ I + WG+D ++
Sbjct: 450 PIEFLDFVEADTEGAIKYINSTCICSWGTDPKSR 483
>sp|P26446|PARP1_CHICK Poly [ADP-ribose] polymerase 1 OS=Gallus gallus GN=PARP1 PE=1 SV=2
Length = 1011
Score = 325 bits (834), Expect = 6e-88, Method: Compositional matrix adjust.
Identities = 180/399 (45%), Positives = 245/399 (61%), Gaps = 55/399 (13%)
Query: 362 LEKPVAALVELLFDEKAMTATLKEYELDMDRMPLGKLSAKHLAQGYSILNEVI-SVLDRN 420
L KP+ L++++FD ++M + E+E+D+ +MPLGKLS + + YSILNEV +V D
Sbjct: 662 LAKPIQDLIKMIFDVESMKKAMVEFEIDLQKMPLGKLSKRQIQSAYSILNEVQQAVSDGG 721
Query: 421 AEADVKDRLILTLTNSFYTHIPHSFGLADPPLLDNKQLVVQKMEMIDAMTQIELAYTIKQ 480
+E+ IL L+N FYT IPH FG+ PPLL N + + K++M+D + IE+AY++ +
Sbjct: 722 SESQ-----ILDLSNRFYTLIPHDFGMKKPPLLSNLEYIQAKVQMLDNLLDIEVAYSLLR 776
Query: 481 EGPSAG-VHPLVNCYEKLQANIKSVDTSHPHYEIIHKYVQNTHAKTHREYSLNIEAIFEV 539
G G P+ YEKL+ +IK VD +II +YV+NTHA TH Y L + IF +
Sbjct: 777 GGNEDGDKDPIDINYEKLRTDIKVVDKDSEEAKIIKQYVKNTHAATHNAYDLKVVEIFRI 836
Query: 540 SRHGEDKRFKPFEKLGNKHLLWHGSRLTNFASIISKGLCIAPPEAPVTGYMFGKGIYFAD 599
R GE +R+KPF++L N+ LLWHGSR TNFA I+S+GL IAPPEAPVTGYMFGKGIYFAD
Sbjct: 837 EREGESQRYKPFKQLHNRQLLWHGSRTTNFAGILSQGLRIAPPEAPVTGYMFGKGIYFAD 896
Query: 600 SVSKSANYCMTNSTNNVGLLLLCEVALGKVVLRYMFGKGIYFADSVSKSANYCMTNSTNN 659
VSKSANYC T+ + +GL+LL EVALG + Y + N+++
Sbjct: 897 MVSKSANYCHTSQADPIGLILLGEVALGNM---------------------YELKNASH- 934
Query: 660 VGLLLLCEVALGKVVKKTQAEFVTKLPNGFHSVQGQGRNCPDPKGSIVLDNNITVPLGTL 719
+TKLP G HSV+G G+ PDP + LD + VPLG
Sbjct: 935 ----------------------ITKLPKGKHSVKGLGKTAPDPTATTTLD-GVEVPLGNG 971
Query: 720 IDLPRDQAKNLSLLYNEFIVYDPAQVKIRYILKVRFNYK 758
I + LLYNE+IVYD AQV ++Y+LK++FNYK
Sbjct: 972 IST---GINDTCLLYNEYIVYDVAQVNLKYLLKLKFNYK 1007
Score = 125 bits (314), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 92/279 (32%), Positives = 145/279 (51%), Gaps = 33/279 (11%)
Query: 67 VKLQIKDGLAVDPDSGLADTTELVKYFDDRYLNAVMGKTDVAAGKNSFYKLQVLKSKIHK 126
+KL +K G AVDPDSGL D+ + + + +A +G D+ G NS+YKLQ+L+ +
Sbjct: 520 MKLTVKGGAAVDPDSGLEDSAHVFEK-GGKIFSATLGLVDIVKGTNSYYKLQLLEDD-RE 577
Query: 127 EKYYLFRAWGRIGTSIGGTKVQDFKDVESAFDEFDRCFEKETGNTSGKDAKQKLTASILR 186
+Y++FR+WGR+GT IG K++ E A + F +E++TGN+ K
Sbjct: 578 SRYWVFRSWGRVGTVIGSNKLEQMPSKEDAVEHFLNLYEEKTGNSWHSKNFTKYPKKFYP 637
Query: 187 LGGDTVSD---VRSHVAAAIATKAAVENMEEGGKGARAMEELKEYGIHVVPSKFIKDAAN 243
L D D VR +A TK+ + A+ +++L I ++ F ++
Sbjct: 638 LEIDYGQDEEAVRKLTVSA-GTKSKL---------AKPIQDL----IKMI---FDVESMK 680
Query: 244 GKVLELIEKMNLAPWGSDDSAKHLAQGYSILNEV-ISVLDRNAEADVKDRLILTLTNSFY 302
++E + P G S + + YSILNEV +V D +E+ IL L+N FY
Sbjct: 681 KAMVEFEIDLQKMPLGK-LSKRQIQSAYSILNEVQQAVSDGGSESQ-----ILDLSNRFY 734
Query: 303 THIPHSFGLADPPLLDNKQLVVQKMEMIDAMTQKLLDVK 341
T IPH FG+ PPLL N + + K++M+D LLD++
Sbjct: 735 TLIPHDFGMKKPPLLSNLEYIQAKVQMLD----NLLDIE 769
Score = 46.6 bits (109), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 19/34 (55%), Positives = 26/34 (76%)
Query: 6 KPFECDYAKSNRAKCKGCKDTIIQGTLRLAVMVQ 39
KP+ +YAKS RA CK C ++I + +LRLA+MVQ
Sbjct: 7 KPYRAEYAKSGRASCKKCGESIAKDSLRLALMVQ 40
Score = 39.3 bits (90), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 25/92 (27%), Positives = 49/92 (53%), Gaps = 9/92 (9%)
Query: 177 KQKLTASILRLGGDTVSDVRSHVAAAIATKAAVENMEEGGKGARAMEELKEYGIHVVPSK 236
K+++ + LGG ++ + I+T+ VE M ++ MEE+K+ + VV +
Sbjct: 402 KEEVKNIVEELGG-KMTTTANKATLCISTQKEVEKM------SKKMEEVKDAKVRVVSEE 454
Query: 237 FIKD--AANGKVLELIEKMNLAPWGSDDSAKH 266
F+KD ++N EL+ ++PWG++ +H
Sbjct: 455 FLKDVKSSNKGFQELLSLHAISPWGAEVKTEH 486
Score = 38.1 bits (87), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 14/28 (50%), Positives = 21/28 (75%)
Query: 8 FECDYAKSNRAKCKGCKDTIIQGTLRLA 35
F +YAKSNR+ CKGC+ I +G +R++
Sbjct: 113 FAAEYAKSNRSTCKGCEQKIEKGQIRIS 140
>sp|P31669|PARP1_XENLA Poly [ADP-ribose] polymerase 1 (Fragment) OS=Xenopus laevis
GN=parp1 PE=2 SV=1
Length = 998
Score = 323 bits (828), Expect = 3e-87, Method: Compositional matrix adjust.
Identities = 175/398 (43%), Positives = 238/398 (59%), Gaps = 53/398 (13%)
Query: 362 LEKPVAALVELLFDEKAMTATLKEYELDMDRMPLGKLSAKHLAQGYSILNEVISVLDRNA 421
L KPV L++L+FD ++M + E+E+D+ +MPLGKLS + + YSIL++V + +
Sbjct: 648 LAKPVQELIKLIFDVESMKKAMVEFEIDLQKMPLGKLSKRQIQSAYSILSQVQQAVSES- 706
Query: 422 EADVKDRLILTLTNSFYTHIPHSFGLADPPLLDNKQLVVQKMEMIDAMTQIELAYTIKQE 481
+ + +L L+N FYT IPH FG+ PPLL+N + + K++M+D + IE+AY++ +
Sbjct: 707 ---LSEARLLDLSNQFYTLIPHDFGMKKPPLLNNLEYIQAKVQMLDNLLDIEVAYSLLRG 763
Query: 482 GPSAGVH-PLVNCYEKLQANIKSVDTSHPHYEIIHKYVQNTHAKTHREYSLNIEAIFEVS 540
G G P+ YEK++ +IK V II YV+NTHA TH Y L + IF++
Sbjct: 764 GADDGEKDPIDVKYEKIKTDIKVVAKDSEESRIICDYVKNTHADTHNAYDLEVLEIFKID 823
Query: 541 RHGEDKRFKPFEKLGNKHLLWHGSRLTNFASIISKGLCIAPPEAPVTGYMFGKGIYFADS 600
R GE +R+KPF++L N+ LLWHGSR TNFA I+S+GL IAPPEAPVTGYMFGKGIYFAD
Sbjct: 824 REGEYQRYKPFKQLHNRQLLWHGSRTTNFAGILSQGLRIAPPEAPVTGYMFGKGIYFADM 883
Query: 601 VSKSANYCMTNSTNNVGLLLLCEVALGKVVLRYMFGKGIYFADSVSKSANYCMTNSTNNV 660
VSKSANYC + +GL+LL EVALG N+
Sbjct: 884 VSKSANYCHAMPGSPIGLILLGEVALG-------------------------------NM 912
Query: 661 GLLLLCEVALGKVVKKTQAEFVTKLPNGFHSVQGQGRNCPDPKGSIVLDNNITVPLGTLI 720
L A +TKLP G HSV+G GR PDP ++ LD + VPLG
Sbjct: 913 HEL-------------KAASQITKLPKGKHSVKGLGRTAPDPSATVQLD-GVDVPLGKGT 958
Query: 721 DLPRDQAKNLSLLYNEFIVYDPAQVKIRYILKVRFNYK 758
+ SLLYNE+IVYD AQV ++Y+LK++FNYK
Sbjct: 959 SA---NISDTSLLYNEYIVYDIAQVNLKYLLKLKFNYK 993
Score = 117 bits (293), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 85/289 (29%), Positives = 147/289 (50%), Gaps = 30/289 (10%)
Query: 55 QEKSVFKSKSGTVKLQIKDGLAVDPDSGLADTTELVKYFDDRYLNAVMGKTDVAAGKNSF 114
+EK KS+ +KL +K G A+DPDS L D+ +++ + +A +G D+ G NS+
Sbjct: 495 EEKGSNKSEK-KMKLTVKGGAAIDPDSELEDSCHVLET-GGKIFSATLGLVDITRGTNSY 552
Query: 115 YKLQVLKSKIHKEKYYLFRAWGRIGTSIGGTKVQDFKDVESAFDEFDRCFEKETGNTSGK 174
YKLQ+++ +Y++FR+WGR+GT IG K+++ E A + F ++ +TGN
Sbjct: 553 YKLQLIEHD-RDSRYWVFRSWGRVGTVIGSKKLEEMSSKEDAIEHFLNLYQDKTGNAWHS 611
Query: 175 DAKQKLTASILRLGGD--TVSDVRSHVAAAIATKAAVENMEEGGKGARAMEELKEYGIHV 232
K L D DV ++ TK+ + A+ ++EL I +
Sbjct: 612 PNFTKYPKKFYPLEIDYGQEEDVVKKLSVGAGTKSKL---------AKPVQEL----IKL 658
Query: 233 VPSKFIKDAANGKVLELIEKMNLAPWGSDDSAKHLAQGYSILNEVISVLDRNAEADVKDR 292
+ F ++ ++E + P G S + + YSIL++V + + + +
Sbjct: 659 I---FDVESMKKAMVEFEIDLQKMPLGK-LSKRQIQSAYSILSQVQQAVSES----LSEA 710
Query: 293 LILTLTNSFYTHIPHSFGLADPPLLDNKQLVVQKMEMIDAMTQKLLDVK 341
+L L+N FYT IPH FG+ PPLL+N + + K++M+D LLD++
Sbjct: 711 RLLDLSNQFYTLIPHDFGMKKPPLLNNLEYIQAKVQMLD----NLLDIE 755
Score = 38.1 bits (87), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 14/28 (50%), Positives = 21/28 (75%)
Query: 8 FECDYAKSNRAKCKGCKDTIIQGTLRLA 35
F +YAKSNR+ CKGC+ I +G +R++
Sbjct: 99 FAAEYAKSNRSACKGCEQKIEKGQIRIS 126
Score = 35.8 bits (81), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 16/27 (59%), Positives = 19/27 (70%)
Query: 13 AKSNRAKCKGCKDTIIQGTLRLAVMVQ 39
AKS RA CK C D I + +L LA+MVQ
Sbjct: 1 AKSGRASCKKCGDNIAKESLGLAIMVQ 27
Score = 34.7 bits (78), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 27/91 (29%), Positives = 44/91 (48%), Gaps = 8/91 (8%)
Query: 173 GKDAKQKLTASILRLG-GDTVSDVRSHVAAAIATKAAVENMEEGGKGARAMEELKEYGIH 231
GK +K K L G G V+ I+T V+ M ++ MEE+K +
Sbjct: 383 GKLSKNKDEVKTLIEGLGGKVAGSAHKANLCISTNKEVKKM------SKKMEEVKAANVR 436
Query: 232 VVPSKFIKDAANGK-VLELIEKMNLAPWGSD 261
VV F+K+ +GK V EL+ + ++ WG++
Sbjct: 437 VVSDDFLKEVESGKSVQELLSQFGISSWGAE 467
>sp|Q5Z8Q9|PRP2A_ORYSJ Poly [ADP-ribose] polymerase 2-A OS=Oryza sativa subsp. japonica
GN=PARP2-A PE=3 SV=2
Length = 660
Score = 279 bits (713), Expect = 7e-74, Method: Compositional matrix adjust.
Identities = 161/426 (37%), Positives = 233/426 (54%), Gaps = 56/426 (13%)
Query: 338 LDVKYEDTSKSKKVKVEPMD---IECSLEKPVAALVELLFDEKAMTATLKEYELDMDRMP 394
L++ Y + + KV P E LE +A+ + L+ + M + E + D++P
Sbjct: 284 LEMDYGEADRETNKKVSPSTDQIKETKLETRIASFISLICNISMMKQQMVEIGYNSDKLP 343
Query: 395 LGKLSAKHLAQGYSILNEVISVLDRNAEADVKDRLILTLTNSFYTHIPHSFGLADPP--L 452
LGKLS + +GY +L + +V+ R AD R + LT FYT IPH FG +
Sbjct: 344 LGKLSKSTIFKGYDVLKRISNVISR---AD--RRQLEQLTGEFYTVIPHDFGFKKMREFI 398
Query: 453 LDNKQLVVQKMEMIDAMTQIELAYTIKQEGPSAGVHPLVNCYEKLQANIKSVDTSHPHYE 512
+D Q + K+EM++A+ +IE+A + ++ + PL Y++L + ++ Y
Sbjct: 399 IDTPQKLKAKLEMVEALGEIEIATKLLEDDSTDQDDPLYARYKQLSCDFTPLEVGSEEYS 458
Query: 513 IIHKYVQNTHAKTHREYSLNIEAIFEVSRHGEDKRFKPFEKLGNKHLLWHGSRLTNFASI 572
+I Y+ NTH KTH Y++++ IF+VSRHGE +RF+ F GN+ LLWHGSRLTN+A I
Sbjct: 459 MIKTYLANTHGKTHTSYTVDVVQIFKVSRHGEMERFQKFATAGNRMLLWHGSRLTNWAGI 518
Query: 573 ISKGLCIAPPEAPVTGYMFGKGIYFADSVSKSANYCMTNSTNNVGLLLLCEVALGKVVLR 632
+S+GL IAPPEAPVTGYMFGKG+YFAD SKSANYC + G+LLLCEVALG++
Sbjct: 519 LSQGLRIAPPEAPVTGYMFGKGVYFADMFSKSANYCYASEACRSGVLLLCEVALGEM--- 575
Query: 633 YMFGKGIYFADSVSKSANYCMTNSTNNVGLLLLCEVALGKVVKKTQAEFVTKLPNGFHSV 692
+ +A+Y N LP G S
Sbjct: 576 -----------NELLNADYDANN-----------------------------LPKGKLST 595
Query: 693 QGQGRNCPDPKGSIVLDNNITVPLGTLIDLPRDQAKNLSLLYNEFIVYDPAQVKIRYILK 752
+G G+ P+ S + D+ + VPLG P +K SLLYNEFIVY+ Q+++RY+L
Sbjct: 596 KGVGQTEPNTAESKITDDGVVVPLGKPKAEP---SKRGSLLYNEFIVYNVDQIRMRYVLH 652
Query: 753 VRFNYK 758
V FN+K
Sbjct: 653 VSFNFK 658
Score = 56.2 bits (134), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 64/255 (25%), Positives = 107/255 (41%), Gaps = 43/255 (16%)
Query: 95 DRYLNAVMGKTDVAAGKNSFYKLQVLKSKIHKEKYYLFRAWGRIGTSIGGTKVQD-FKDV 153
D +A M +T+V N FY +Q L+S + ++ WGR+G G K+ F
Sbjct: 192 DEIYDATMNQTNVGDNNNKFYIIQALESDAGGS-FMVYNRWGRVGAR-GQDKLHGPFSSR 249
Query: 154 ESAFDEFDRCFEKETGNTSGKDAKQKLTASILRLGGDTVSDVRSHVAAA-----IATKAA 208
E A EF+ F +T N SD +S A +
Sbjct: 250 EQAIYEFEGKFHGKTNNH--------------------WSDRKSFECYARKYTWLEMDYG 289
Query: 209 VENMEEGGKGARAMEELKEYGIHVVPSKFIKDAANGKVLELIEKMNLAPWGSDD------ 262
+ E K + + +++KE + + FI N +++ ++M + SD
Sbjct: 290 EADRETNKKVSPSTDQIKETKLETRIASFISLICNISMMK--QQMVEIGYNSDKLPLGKL 347
Query: 263 SAKHLAQGYSILNEVISVLDRNAEADVKDRLILTLTNSFYTHIPHSFGLADPP--LLDNK 320
S + +GY +L + +V+ R AD R + LT FYT IPH FG ++D
Sbjct: 348 SKSTIFKGYDVLKRISNVISR---AD--RRQLEQLTGEFYTVIPHDFGFKKMREFIIDTP 402
Query: 321 QLVVQKMEMIDAMTQ 335
Q + K+EM++A+ +
Sbjct: 403 QKLKAKLEMVEALGE 417
>sp|Q11207|PARP2_ARATH Poly [ADP-ribose] polymerase 2 OS=Arabidopsis thaliana GN=PARP2
PE=2 SV=1
Length = 637
Score = 271 bits (692), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 158/416 (37%), Positives = 229/416 (55%), Gaps = 59/416 (14%)
Query: 346 SKSKKVKVEPMDIECSLEKPVAALVELLFDEKAMTATLKEYELDMDRMPLGKLSAKHLAQ 405
S S +VK E + L+ VA + L+ + M + E + +++PLGK+S +++
Sbjct: 277 SSSSEVKPE----QSKLDTRVAKFISLICNVSMMAQHMMEIGYNANKLPLGKISKSTISK 332
Query: 406 GYSILNEVISVLDRNAEADVKDRLILT-LTNSFYTHIPHSFGLADPP--LLDNKQLVVQK 462
GY +L + V+DR DR L L+ FYT IPH FG ++D Q + QK
Sbjct: 333 GYEVLKRISEVIDR------YDRTRLEELSGEFYTVIPHDFGFKKMSQFVIDTPQKLKQK 386
Query: 463 MEMIDAMTQIELAYTIKQEGPSAGVHPLVNCYEKLQANIKSVDTSHPHYEIIHKYVQNTH 522
+EM++A+ +IELA + P PL Y++L + V + ++ Y++NTH
Sbjct: 387 IEMVEALGEIELATKLLSVDPGLQDDPLYYHYQQLNCGLTPVGNDSEEFSMVANYMENTH 446
Query: 523 AKTHREYSLNIEAIFEVSRHGEDKRFKPFEKLGNKHLLWHGSRLTNFASIISKGLCIAPP 582
AKTH Y++ I +F SR E RF+ F N+ LLWHGSRLTN+A I+S+GL IAPP
Sbjct: 447 AKTHSGYTVEIAQLFRASRAVEADRFQQFSSSKNRMLLWHGSRLTNWAGILSQGLRIAPP 506
Query: 583 EAPVTGYMFGKGIYFADSVSKSANYCMTNSTNNVGLLLLCEVALGKVVLRYMFGKGIYFA 642
EAPVTGYMFGKG+YFAD SKSANYC N+ N G+LLLCEVALG + + ++
Sbjct: 507 EAPVTGYMFGKGVYFADMFSKSANYCYANTGANDGVLLLCEVALGDM-------NELLYS 559
Query: 643 DSVSKSANYCMTNSTNNVGLLLLCEVALGKVVKKTQAEFVTKLPNGFHSVQGQGRNCPDP 702
D N+ N LP G S +G G+ P+P
Sbjct: 560 D----------YNADN--------------------------LPPGKLSTKGVGKTAPNP 583
Query: 703 KGSIVLDNNITVPLGTLIDLPRDQAKNLSLLYNEFIVYDPAQVKIRYILKVRFNYK 758
+ L++ + VPLG ++ R +K + LLYNE+IVY+ Q+K+RY+++V+FNYK
Sbjct: 584 SEAQTLEDGVVVPLGKPVE--RSCSKGM-LLYNEYIVYNVEQIKMRYVIQVKFNYK 636
Score = 59.7 bits (143), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 68/262 (25%), Positives = 115/262 (43%), Gaps = 37/262 (14%)
Query: 94 DDRYLNAVMGKTDVAAGKNSFYKLQVLKSKIHKEKYYLFRAWGRIGTSIGGTKVQDFKDV 153
DD Y +A++ +T+V N F+ LQVL+S K+ Y ++ WGR+G V+ +
Sbjct: 166 DDVY-DAILNQTNVRDNNNKFFVLQVLESD-SKKTYMVYTRWGRVG-------VKGQSKL 216
Query: 154 ESAFDEFDRCFEKETGNTSGKDAKQKLTASILRLGGDTVSDVRSHVAAAIATKAAVENME 213
+ +D +DR E T + K T + + + +S+ + +
Sbjct: 217 DGPYDSWDRAIEIFTNKFNDK------TKNYWSDRKEFIPHPKSYTWLEMDYGKEENDSP 270
Query: 214 EGGKGARAMEELK--EYGIHVVPSKFIKDAAN-----GKVLELIEKMNLAPWGSDDSAKH 266
+ E+K + + +KFI N ++E+ N P G S
Sbjct: 271 VNNDIPSSSSEVKPEQSKLDTRVAKFISLICNVSMMAQHMMEIGYNANKLPLGK-ISKST 329
Query: 267 LAQGYSILNEVISVLDRNAEADVKDRLIL-TLTNSFYTHIPHSFGLADPP--LLDNKQLV 323
+++GY +L + V+DR DR L L+ FYT IPH FG ++D Q +
Sbjct: 330 ISKGYEVLKRISEVIDR------YDRTRLEELSGEFYTVIPHDFGFKKMSQFVIDTPQKL 383
Query: 324 VQKMEMIDAMTQ-----KLLDV 340
QK+EM++A+ + KLL V
Sbjct: 384 KQKIEMVEALGEIELATKLLSV 405
>sp|Q0JMY1|PRP2B_ORYSJ Poly [ADP-ribose] polymerase 2-B OS=Oryza sativa subsp. japonica
GN=PARP2-B PE=3 SV=2
Length = 605
Score = 269 bits (687), Expect = 6e-71, Method: Compositional matrix adjust.
Identities = 151/403 (37%), Positives = 225/403 (55%), Gaps = 53/403 (13%)
Query: 359 ECSLEKPVAALVELLFDEKAMTATLKEYELDMDRMPLGKLSAKHLAQGYSILNEVISVLD 418
E LE A+ + L+ D M + E + D++PLGKLS + +GY +L + +V+
Sbjct: 250 ETKLETRTASFISLICDISMMKQQMVEIGYNADKLPLGKLSKSTILKGYDVLKRISNVI- 308
Query: 419 RNAEADVKDRLILTLTNSFYTHIPHSFGLADPP--LLDNKQLVVQKMEMIDAMTQIELAY 476
+ AD + LT FY+ IPH FG ++D Q + K+EM++A+++IE+A
Sbjct: 309 --SGADTDRTQLEQLTGEFYSVIPHDFGFKKMSEFIIDTPQKLKAKLEMVEALSEIEIAI 366
Query: 477 TIKQEGPSAGVHPLVNCYEKLQANIKSVDTSHPHYEIIHKYVQNTHAKTHREYSLNIEAI 536
+ ++ S HPL Y++ + ++ Y +I Y+ NTH KTH Y+++I I
Sbjct: 367 KLLEDDSSDQDHPLYARYKQFCCDFTPLEVDSEEYSMIKTYLTNTHGKTHTGYTVDIVQI 426
Query: 537 FEVSRHGEDKRFKPFEKLGNKHLLWHGSRLTNFASIISKGLCIAPPEAPVTGYMFGKGIY 596
F+VSR GE +RF+ F GN+ LLWHGSRLTN+A I+S+GL IAPPEAP++G+MFGKG+Y
Sbjct: 427 FKVSRLGEMERFQKFASAGNRMLLWHGSRLTNWAGILSQGLRIAPPEAPISGFMFGKGVY 486
Query: 597 FADSVSKSANYCMTNSTNNVGLLLLCEVALGKV-VLRYMFGKGIYFADSVSKSANYCMTN 655
FAD SKSANYC + G++LLCEVALG++ L Y G + AD+
Sbjct: 487 FADMFSKSANYCCASEACKSGVMLLCEVALGEMNELLY----GDFGADN----------- 531
Query: 656 STNNVGLLLLCEVALGKVVKKTQAEFVTKLPNGFHSVQGQGRNCPDPKGSIVLDNNITVP 715
LPNG S +G G+ P+ S + D+ + +P
Sbjct: 532 -----------------------------LPNGKLSTKGVGQTEPNIAESKITDDGMVIP 562
Query: 716 LGTLIDLPRDQAKNLSLLYNEFIVYDPAQVKIRYILKVRFNYK 758
LG +P ++ SL+YNE+IVY+ Q+++RYIL V FN+K
Sbjct: 563 LGKPEKVP---SRRGSLMYNEYIVYNVDQIRMRYILNVNFNFK 602
Score = 51.2 bits (121), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 54/263 (20%), Positives = 103/263 (39%), Gaps = 55/263 (20%)
Query: 95 DRYLNAVMGKTDVAAGKNSFYKLQVLKSKIHKEKYYLFRAWGRIGTSIGGTKVQDFKDVE 154
D +A M +T+V N FY +Q L+S + ++ WGR+GT +D+
Sbjct: 161 DEIYDATMNQTNVGGNNNKFYIIQALESDAGGN-FMVYSRWGRVGT----------RDIH 209
Query: 155 SAFDEFDRCFEKETGNTSGKDAKQKLTASILRLGGDTVSDVRSHVAAAIATKAAVENMEE 214
++ + C+ +H + + E
Sbjct: 210 WSYRKGSHCY--------------------------------AHKYTWLEMDYGEADKET 237
Query: 215 GGKGARAMEELKEYGIHVVPSKFIK-----DAANGKVLELIEKMNLAPWGSDDSAKHLAQ 269
K + +L+E + + FI +++E+ + P G S + +
Sbjct: 238 NKKTSSITNQLEETKLETRTASFISLICDISMMKQQMVEIGYNADKLPLGKL-SKSTILK 296
Query: 270 GYSILNEVISVLDRNAEADVKDRLILTLTNSFYTHIPHSFGLADPP--LLDNKQLVVQKM 327
GY +L + +V+ + AD + LT FY+ IPH FG ++D Q + K+
Sbjct: 297 GYDVLKRISNVI---SGADTDRTQLEQLTGEFYSVIPHDFGFKKMSEFIIDTPQKLKAKL 353
Query: 328 EMIDAMTQKLLDVK-YEDTSKSK 349
EM++A+++ + +K ED S +
Sbjct: 354 EMVEALSEIEIAIKLLEDDSSDQ 376
>sp|O88554|PARP2_MOUSE Poly [ADP-ribose] polymerase 2 OS=Mus musculus GN=Parp2 PE=1 SV=3
Length = 559
Score = 265 bits (678), Expect = 7e-70, Method: Compositional matrix adjust.
Identities = 152/415 (36%), Positives = 224/415 (53%), Gaps = 52/415 (12%)
Query: 343 EDTSKSKKVKVEPMDIECSLEKPVAALVELLFDEKAMTATLKEYELDMDRMPLGKLSAKH 402
+D SK+K+ E + E L+ V L++L+ + + M + E + D R PLGKL+
Sbjct: 193 QDESKTKEE--ETLKPESQLDLRVQELLKLICNVQTMEEMMIEMKYDTKRAPLGKLTVAQ 250
Query: 403 LAQGYSILNEVISVLDRNAEADVKDRLILTLTNSFYTHIPHSFGLADPPLLDNKQLVVQK 462
+ GY L ++ + A R ++ N FYT IPH FGL+ PP++ ++ + K
Sbjct: 251 IKAGYQSLKKIEDCI----RAGQHGRALVEACNEFYTRIPHDFGLSIPPVIRTEKELSDK 306
Query: 463 MEMIDAMTQIELAYTIKQEGPSAGVHPLVNCYEKLQANIKSVDTSHPHYEIIHKYVQNTH 522
+++++A+ IE+A + + HPL Y L ++ +D +++I +Y+Q+TH
Sbjct: 307 VKLLEALGDIEIALKLVKSERQGLEHPLDQHYRNLHCALRPLDHESNEFKVISQYLQSTH 366
Query: 523 AKTHREYSLNIEAIFEVSRHGEDKRFKPFEKLGNKHLLWHGSRLTNFASIISKGLCIAPP 582
A TH++Y++ + +FEV + GE + F+ E L N+ LLWHGSRL+N+ I+S GL +APP
Sbjct: 367 APTHKDYTMTLLDVFEVEKEGEKEAFR--EDLPNRMLLWHGSRLSNWVGILSHGLRVAPP 424
Query: 583 EAPVTGYMFGKGIYFADSVSKSANYCMTNSTNNVGLLLLCEVALGKVVLRYMFGKGIYFA 642
EAP+TGYMFGKGIYFAD SKSANYC + N GLLLL EVALG+
Sbjct: 425 EAPITGYMFGKGIYFADMSSKSANYCFASRLKNTGLLLLSEVALGQ-------------- 470
Query: 643 DSVSKSANYCMTNSTNNVGLLLLCEVALGKVVKKTQAEFVTKLPNGFHSVQGQGRNCPDP 702
N + + GLL G HS +G G+ P P
Sbjct: 471 ------CNELLEANPKAQGLL-----------------------RGKHSTKGMGKMAPSP 501
Query: 703 KGSIVLDNNITVPLGTLIDLPRDQAKNLSLLYNEFIVYDPAQVKIRYILKVRFNY 757
I L N TVPLG D + +L YNEFIVY P QV++RY+LK++FN+
Sbjct: 502 AHFITL-NGSTVPLGPASDTGILNPEGYTLNYNEFIVYSPNQVRMRYLLKIQFNF 555
Score = 52.0 bits (123), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 62/272 (22%), Positives = 118/272 (43%), Gaps = 31/272 (11%)
Query: 69 LQIKDGLAVDPDSGLADTTELVKYFDDRYLNAVMGKTDVAAGKNSFYKLQVLKSKIHKEK 128
L +K VDP+ V D + ++ +T++ N +Y +Q+L+ +
Sbjct: 66 LLLKGKAPVDPECAAKLGKAHVYCEGDDVYDVMLNQTNLQFNNNKYYLIQLLEDDAQR-N 124
Query: 129 YYLFRAWGRIGTSIGGTKVQDFKDVESAFDEFDRCF-EKETGNTSGKDAKQKLTASILRL 187
+ ++ WGR+G + + V D+ A + F + F +K N ++ +K+ L
Sbjct: 125 FSVWMRWGRVGKTGQHSLVTCSGDLNKAKEIFQKKFLDKTKNNWEDRENFEKVPGKYDML 184
Query: 188 GGDTVSDVRSHVAAAIATKAAVENMEEGGKGARAMEELK-EYGIHVVPSKFIKDAANGKV 246
D A +T+ + EE E LK E + + + +K N +
Sbjct: 185 QMDY----------AASTQDESKTKEE--------ETLKPESQLDLRVQELLKLICNVQT 226
Query: 247 LE--LIE---KMNLAPWGSDDSAKHLAQGYSILNEVISVLDRNAEADVKDRLILTLTNSF 301
+E +IE AP G A+ + GY L ++ + A R ++ N F
Sbjct: 227 MEEMMIEMKYDTKRAPLGKLTVAQ-IKAGYQSLKKIEDCI----RAGQHGRALVEACNEF 281
Query: 302 YTHIPHSFGLADPPLLDNKQLVVQKMEMIDAM 333
YT IPH FGL+ PP++ ++ + K+++++A+
Sbjct: 282 YTRIPHDFGLSIPPVIRTEKELSDKVKLLEAL 313
>sp|Q9ZP54|PARP1_ARATH Poly [ADP-ribose] polymerase 1 OS=Arabidopsis thaliana GN=PARP1
PE=1 SV=2
Length = 983
Score = 265 bits (676), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 152/410 (37%), Positives = 225/410 (54%), Gaps = 54/410 (13%)
Query: 351 VKVEPMDIECSLEKPVAALVELLFDEKAMTATLKEYELDMDRMPLGKLSAKHLAQGYSIL 410
K EP +L + L+++LFD + + + E+E++M MPLGKLS ++ +G+ L
Sbjct: 625 AKKEPFQTSSNLAPSLIELMKMLFDVETYRSAMMEFEINMSEMPLGKLSKHNIQKGFEAL 684
Query: 411 NEVISVL-DRNAEADVKDRLILTLTNSFYTHIPHSFGLADPPLLDNKQLVVQKMEMIDAM 469
E+ +L + + + +K+ L++ +N F+T IP P ++ ++ K++M++A+
Sbjct: 685 TEIQRLLTESDPQPTMKESLLVDASNRFFTMIPS----IHPHIIRDEDDFKSKVKMLEAL 740
Query: 470 TQIELAYTIKQEGPSAGVHPLVNCYEKLQANIKSVDTSHPHYEIIHKYVQNTHAKTHREY 529
IE+A I + L + Y+KL +I + Y +I KY+ THA TH E+
Sbjct: 741 QDIEIASRIVGFDVDS-TESLDDKYKKLHCDISPLPHDSEDYRLIEKYLNTTHAPTHTEW 799
Query: 530 SLNIEAIFEVSRHGEDKRFKPF-EKLGNKHLLWHGSRLTNFASIISKGLCIAPPEAPVTG 588
SL +E +F + R GE ++ P EKLGNK LLWHGSRLTNF I+++GL IAPPEAP TG
Sbjct: 800 SLELEEVFALEREGEFDKYAPHREKLGNKMLLWHGSRLTNFVGILNQGLRIAPPEAPATG 859
Query: 589 YMFGKGIYFADSVSKSANYCMTNSTNNVGLLLLCEVALGKVVLRYMFGKGIYFADSVSKS 648
YMFGKGIYFAD VSKSA YC T N VGL+LL EVAL
Sbjct: 860 YMFGKGIYFADLVSKSAQYCYTCKKNPVGLMLLSEVAL---------------------- 897
Query: 649 ANYCMTNSTNNVGLLLLCEVALGKVVKKTQAEFVTKLPNGFHSVQGQGRNCPDPKGSIVL 708
G++ + T+A+++ K P G HS +G G+ P
Sbjct: 898 ----------------------GEIHELTKAKYMDKPPRGKHSTKGLGKKVPQDSEFAKW 935
Query: 709 DNNITVPLGTLIDLPRDQAKNLSLLYNEFIVYDPAQVKIRYILKVRFNYK 758
++TVP G + + K L+YNE+IVYD AQVK++++LKVRF +K
Sbjct: 936 RGDVTVPCGKPVS---SKVKASELMYNEYIVYDTAQVKLQFLLKVRFKHK 982
Score = 68.2 bits (165), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 71/273 (26%), Positives = 129/273 (47%), Gaps = 30/273 (10%)
Query: 67 VKLQIKDGLAVDPDSGLADTTELVKYFDDRYLNAVMGKTDVAAGKNSFYKLQVLKSKIHK 126
V +++K AV SGL + +++ + Y N + +D++ G NS+Y LQ+++
Sbjct: 492 VTVKVKGRSAVHEASGLQEHCHILEDGNSIY-NTTLSMSDLSTGINSYYILQIIQEDKGS 550
Query: 127 EKYYLFRAWGRIGTS-IGGTKVQDFKDVESAFDEFDRCFEKETGNT----SGKDAKQKLT 181
+ Y+FR WGR+G IGG KV++ + A EF R F ++TGNT K QK
Sbjct: 551 D-CYVFRKWGRVGNEKIGGNKVEEMSKSD-AVHEFKRLFLEKTGNTWESWEQKTNFQKQP 608
Query: 182 ASILRLGGDTVSDVRSHVAAAIATKAAVENMEEGGKGARAMEELKEYGIHVVPSKFIKDA 241
L L D+ V +A K E + A ++ EL + V +
Sbjct: 609 GKFLPL------DIDYGVNKQVAKK---EPFQTSSNLAPSLIELMKMLFDV-------ET 652
Query: 242 ANGKVLELIEKMNLAPWGSDDSAKHLAQGYSILNEVISVL-DRNAEADVKDRLILTLTNS 300
++E M+ P G S ++ +G+ L E+ +L + + + +K+ L++ +N
Sbjct: 653 YRSAMMEFEINMSEMPLGK-LSKHNIQKGFEALTEIQRLLTESDPQPTMKESLLVDASNR 711
Query: 301 FYTHIPHSFGLADPPLLDNKQLVVQKMEMIDAM 333
F+T IP P ++ ++ K++M++A+
Sbjct: 712 FFTMIPS----IHPHIIRDEDDFKSKVKMLEAL 740
Score = 40.0 bits (92), Expect = 0.076, Method: Compositional matrix adjust.
Identities = 17/39 (43%), Positives = 24/39 (61%)
Query: 1 MSKHAKPFECDYAKSNRAKCKGCKDTIIQGTLRLAVMVQ 39
M+ KP+ +YAKS+R+ CK CK I + RL +VQ
Sbjct: 1 MASPHKPWRAEYAKSSRSSCKTCKSVINKENFRLGKLVQ 39
>sp|O50017|PARP2_MAIZE Poly [ADP-ribose] polymerase 2 OS=Zea mays GN=PARP2 PE=2 SV=1
Length = 653
Score = 264 bits (674), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 158/427 (37%), Positives = 229/427 (53%), Gaps = 60/427 (14%)
Query: 338 LDVKYEDTSKS-KKVKVEPMDIECSLEKPVAALVELLFDEKAMTATLKEYELDMDRMPLG 396
L++ Y +T K +K + E LE +A + L+ + M + E + +++PLG
Sbjct: 279 LEMDYGETEKEIEKGSITDQIKETKLETRIAQFISLICNISMMKQRMVEIGYNAEKLPLG 338
Query: 397 KLSAKHLAQGYSIL---NEVISVLDRNAEADVKDRLILTLTNSFYTHIPHSFGLADPP-- 451
KL + +GY +L ++VIS DR R + LT FYT IPH FG
Sbjct: 339 KLRKATILKGYHVLKRISDVISKADR--------RHLEQLTGEFYTVIPHDFGFRKMREF 390
Query: 452 LLDNKQLVVQKMEMIDAMTQIELAYTIKQEGPSAGVHPLVNCYEKLQANIKSVDTSHPHY 511
++D Q + K+EM++A+ +IE+A + ++ S PL Y++L + ++ Y
Sbjct: 391 IIDTPQKLKAKLEMVEALGEIEIATKLLEDDSSDQDDPLYARYKQLHCDFTPLEADSDEY 450
Query: 512 EIIHKYVQNTHAKTHREYSLNIEAIFEVSRHGEDKRFKPFEKLGNKHLLWHGSRLTNFAS 571
+I Y++NTH KTH Y+++I IF+VSRHGE +RF+ F N+ LLWHGSRL+N+A
Sbjct: 451 SMIKSYLRNTHGKTHSGYTVDIVQIFKVSRHGETERFQKFASTRNRMLLWHGSRLSNWAG 510
Query: 572 IISKGLCIAPPEAPVTGYMFGKGIYFADSVSKSANYCMTNSTNNVGLLLLCEVALGKVVL 631
I+S+GL IAPPEAPVTGYMFGKG+YFAD SKSANYC + G+LLLCEVALG +
Sbjct: 511 ILSQGLRIAPPEAPVTGYMFGKGVYFADMFSKSANYCYASEACRSGVLLLCEVALGDM-- 568
Query: 632 RYMFGKGIYFADSVSKSANYCMTNSTNNVGLLLLCEVALGKVVKKTQAEFVTKLPNGFHS 691
+ +A+Y N LP G
Sbjct: 569 ------------NELLNADYDANN-----------------------------LPKGKLR 587
Query: 692 VQGQGRNCPDPKGSIVLDNNITVPLGTLIDLPRDQAKNLSLLYNEFIVYDPAQVKIRYIL 751
+G G+ P+ S V D+ + VPLG P +K LLYNE+IVY+ Q+++RY+L
Sbjct: 588 SKGVGQTAPNMVESKVADDGVVVPLGEPKQEP---SKRGGLLYNEYIVYNVDQIRMRYVL 644
Query: 752 KVRFNYK 758
V FN+K
Sbjct: 645 HVNFNFK 651
Score = 50.8 bits (120), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 84/340 (24%), Positives = 136/340 (40%), Gaps = 49/340 (14%)
Query: 13 AKSNRAKCKGCKDTIIQGTLRLAV---MVQINARIGEAKDVKLKSQEKSVFKSKSGTVKL 69
AK+ G K +IQ L V +G + +K +E V K K T
Sbjct: 103 AKARGVAANGGKKDVIQRLLSATAGPAAVADGGPLGAKEVIKGGDEEVEVKKEKMVTA-- 160
Query: 70 QIKDGLAVDPDSGLADTTEL---VKYFDDRYLNAVMGKTDVAAGKNSFYKLQVLKSKIHK 126
K G AV D + D ++ V D +A + +T+V N FY +QVL+S
Sbjct: 161 -TKKGAAV-LDQHIPDHIKVNYHVLQVGDEIYDATLNQTNVGDNNNKFYIIQVLESDAGG 218
Query: 127 EKYYLFRAWGRIGTSIGGTKVQDFKDV-ESAFDEFDRCFEKETGNTSGKDAKQKLTASIL 185
+ ++ WGR+G G K+ + A EF+ F +T N K A
Sbjct: 219 S-FMVYNRWGRVGVR-GQDKLHGPSPTRDQAIYEFEGKFHNKTNNHWSDRKNFKCYA--- 273
Query: 186 RLGGDTVSDVRSHVAAAIATKAAVENMEEGGKGARAMEELKEYGIHVVPSKFIKDAAN-- 243
+ + + + +E+G +++KE + ++FI N
Sbjct: 274 ----------KKYTWLEMDYGETEKEIEKGS----ITDQIKETKLETRIAQFISLICNIS 319
Query: 244 ---GKVLELIEKMNLAPWGSDDSAKHLAQGYSIL---NEVISVLDRNAEADVKDRLILTL 297
+++E+ P G A L +GY +L ++VIS DR R + L
Sbjct: 320 MMKQRMVEIGYNAEKLPLGKLRKATIL-KGYHVLKRISDVISKADR--------RHLEQL 370
Query: 298 TNSFYTHIPHSFGLADPP--LLDNKQLVVQKMEMIDAMTQ 335
T FYT IPH FG ++D Q + K+EM++A+ +
Sbjct: 371 TGEFYTVIPHDFGFRKMREFIIDTPQKLKAKLEMVEALGE 410
>sp|Q9UGN5|PARP2_HUMAN Poly [ADP-ribose] polymerase 2 OS=Homo sapiens GN=PARP2 PE=1 SV=2
Length = 583
Score = 258 bits (659), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 150/415 (36%), Positives = 224/415 (53%), Gaps = 51/415 (12%)
Query: 343 EDTSKSKKVKVEPMDIECSLEKPVAALVELLFDEKAMTATLKEYELDMDRMPLGKLSAKH 402
E+T K + +K P+ E L+ V L++L+ + +AM + E + + + PLGKL+
Sbjct: 216 EETKKEESLK-SPLKPESQLDLRVQELIKLICNVQAMEEMMMEMKYNTKKAPLGKLTVAQ 274
Query: 403 LAQGYSILNEVISVLDRNAEADVKDRLILTLTNSFYTHIPHSFGLADPPLLDNKQLVVQK 462
+ GY L ++ + A R ++ N FYT IPH FGL PPL+ ++ + +K
Sbjct: 275 IKAGYQSLKKIEDCI----RAGQHGRALMEACNEFYTRIPHDFGLRTPPLIRTQKELSEK 330
Query: 463 MEMIDAMTQIELAYTIKQEGPSAGVHPLVNCYEKLQANIKSVDTSHPHYEIIHKYVQNTH 522
+++++A+ IE+A + + + HPL Y L ++ +D +++I +Y+Q+TH
Sbjct: 331 IQLLEALGDIEIAIKLVKTELQSPEHPLDQHYRNLHCALRPLDHESYEFKVISQYLQSTH 390
Query: 523 AKTHREYSLNIEAIFEVSRHGEDKRFKPFEKLGNKHLLWHGSRLTNFASIISKGLCIAPP 582
A TH +Y++ + +FEV + GE + F+ E L N+ LLWHGSR++N+ I+S GL IAPP
Sbjct: 391 APTHSDYTMTLLDLFEVEKDGEKEAFR--EDLHNRMLLWHGSRMSNWVGILSHGLRIAPP 448
Query: 583 EAPVTGYMFGKGIYFADSVSKSANYCMTNSTNNVGLLLLCEVALGKVVLRYMFGKGIYFA 642
EAP+TGYMFGKGIYFAD SKSANYC + N GLLLL EVALG+
Sbjct: 449 EAPITGYMFGKGIYFADMSSKSANYCFASRLKNTGLLLLSEVALGQC------------- 495
Query: 643 DSVSKSANYCMTNSTNNVGLLLLCEVALGKVVKKTQAEFVTKLPNGFHSVQGQGRNCPDP 702
N + + GLL G HS +G G+ P
Sbjct: 496 -------NELLEANPKAEGLL-----------------------QGKHSTKGLGKMAPSS 525
Query: 703 KGSIVLDNNITVPLGTLIDLPRDQAKNLSLLYNEFIVYDPAQVKIRYILKVRFNY 757
+ L N TVPLG D +L YNE+IVY+P QV++RY+LKV+FN+
Sbjct: 526 AHFVTL-NGSTVPLGPASDTGILNPDGYTLNYNEYIVYNPNQVRMRYLLKVQFNF 579
Score = 48.5 bits (114), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 64/281 (22%), Positives = 121/281 (43%), Gaps = 28/281 (9%)
Query: 61 KSKSGTVK-LQIKDGLAVDPDSGLADTTELVKYFDDRYLNAVMGKTDVAAGKNSFYKLQV 119
K S +VK L +K VDP+ V + + ++ +T++ N +Y +Q+
Sbjct: 77 KRVSESVKALLLKGKAPVDPECTAKVGKAHVYCEGNDVYDVMLNQTNLQFNNNKYYLIQL 136
Query: 120 LKSKIHKEKYYLFRAWGRIGTSIGGTKVQDFKDVESAFDEFDRCF-EKETGNTSGKDAKQ 178
L+ + + ++ WGR+G + V ++ A + F + F +K N ++ +
Sbjct: 137 LEDDAQR-NFSVWMRWGRVGKMGQHSLVACSGNLNKAKEIFQKKFLDKTKNNWEDREKFE 195
Query: 179 KLTASILRLGGDTVSDVRSHVAAAIATKAAVENMEEGGKGARAMEELK-EYGIHVVPSKF 237
K+ L D ++ ++ EE K LK E + + +
Sbjct: 196 KVPGKYDMLQMDYATNT--------------QDEEETKKEESLKSPLKPESQLDLRVQEL 241
Query: 238 IKDAANGKVLELIE---KMNL--APWGSDDSAKHLAQGYSILNEVISVLDRNAEADVKDR 292
IK N + +E + K N AP G A+ + GY L ++ + A R
Sbjct: 242 IKLICNVQAMEEMMMEMKYNTKKAPLGKLTVAQ-IKAGYQSLKKIEDCI----RAGQHGR 296
Query: 293 LILTLTNSFYTHIPHSFGLADPPLLDNKQLVVQKMEMIDAM 333
++ N FYT IPH FGL PPL+ ++ + +K+++++A+
Sbjct: 297 ALMEACNEFYTRIPHDFGLRTPPLIRTQKELSEKIQLLEAL 337
>sp|Q7EYV7|PARP1_ORYSJ Poly [ADP-ribose] polymerase 1 OS=Oryza sativa subsp. japonica
GN=PARP1 PE=2 SV=1
Length = 977
Score = 244 bits (624), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 150/424 (35%), Positives = 234/424 (55%), Gaps = 57/424 (13%)
Query: 338 LDVKYEDTSKSKKVKVEPMDIECSLEKPVAALVELLFDEKAMTATLKEYELDMDRMPLGK 397
LD+ Y K+ ++ M + SL + L+ +LF+ + A + E++++M MPLGK
Sbjct: 607 LDIDYGVRQGPKRKDIDKM--KSSLPPQLLELMNMLFNIETYRAAMLEFKINMSEMPLGK 664
Query: 398 LSAKHLAQGYSILNEVISVL--DRNAEADVKDRLILTLTNSFYTHIPHSFGLADPPLLDN 455
LS +++ +G+ L E+ ++L N E V++ LI+ +N F+T IP P ++ +
Sbjct: 665 LSKENIQKGFEALTEIQNLLGNTNNQELAVRESLIVAASNRFFTLIPS----IHPHIIQD 720
Query: 456 KQLVVQKMEMIDAMTQIELAYTIKQEGPSAGVHPLVNCYEKLQANIKSVDTSHPHYEIIH 515
+ ++ K++M++A+ IE+A + S L + Y+KL+ I + Y+++
Sbjct: 721 EDDLMVKVKMLEALQDIEIASKLVG-FDSDNDESLDDKYKKLRCAITPLPHDCEDYKLVE 779
Query: 516 KYVQNTHAKTHREYSLNIEAIFEVSRHGEDKRFKPFEK-LGNKHLLWHGSRLTNFASIIS 574
KY+ NTHA TH+E+SL +E +F + R GE ++ ++ L NK LLWHGSRLTN+ I+S
Sbjct: 780 KYLLNTHAPTHKEWSLELEEVFSLDRDGEFSKYSRYKNNLHNKMLLWHGSRLTNYVGILS 839
Query: 575 KGLCIAPPEAPVTGYMFGKGIYFADSVSKSANYCMTNSTNNVGLLLLCEVALGKVVLRYM 634
+GL IAPPEAPVTGYMFGKG+YFAD VSKSA YC + N VGL+LL EVALG +
Sbjct: 840 QGLRIAPPEAPVTGYMFGKGLYFADLVSKSAQYCYVDRKNPVGLMLLSEVALGDM----- 894
Query: 635 FGKGIYFADSVSKSANYCMTNSTNNVGLLLLCEVALGKVVKKTQAEFVTKLPNGFHSVQG 694
Y + +T+ + K P G HS +G
Sbjct: 895 ----------------YELKKATS-----------------------MDKPPRGKHSTKG 915
Query: 695 QGRNCPDPKGSIVLDNNITVPLGTLIDLPRDQAKNLSLLYNEFIVYDPAQVKIRYILKVR 754
G+ P +++ VP G + K L+YNE+IVY+ +QVK++Y+LKVR
Sbjct: 916 LGKTVPLESEFAKWRDDVVVPCGKPVPA---SIKTSELMYNEYIVYNTSQVKMQYLLKVR 972
Query: 755 FNYK 758
F++K
Sbjct: 973 FHHK 976
Score = 80.1 bits (196), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 93/353 (26%), Positives = 167/353 (47%), Gaps = 41/353 (11%)
Query: 56 EKSVFKSKSGTVKLQIKDGLAVDPDSGLADTTELVKYFDDRYLNAVMGKTDVAAGKNSFY 115
E ++ SK GT+ +++K AV SGL DT +++ Y N + +D+ G NS+Y
Sbjct: 474 EAALESSKGGTMTVKVKGRSAVHESSGLQDTGHILEDGKSIY-NTTLNMSDLTRGVNSYY 532
Query: 116 KLQVLKSKIHKEKYYLFRAWGRIGTS-IGGTKVQDFKDVESAFDEFDRCFEKETGNTSGK 174
LQV++ + Y+FR WGR+G IGGTK+++ + A EF R F ++TGN
Sbjct: 533 ILQVIEED-NGSDCYVFRKWGRVGNEKIGGTKLEEMSKIH-AIQEFRRLFLEKTGNPW-- 588
Query: 175 DAKQKLTASILRLGGDTVSDVRSHVAAAIATKAAVENMEEGGKGARAMEELKEYGIHVVP 234
+A ++ T + G D+ V K ++ M+ L + ++
Sbjct: 589 EAWEQKTNFQKQPGKFYPLDIDYGVRQGPKRK-DIDKMKSS---------LPPQLLELMN 638
Query: 235 SKFIKDAANGKVLELIEKMNLAPWGSDDSAKHLAQGYSILNEVISVL--DRNAEADVKDR 292
F + +LE M+ P G S +++ +G+ L E+ ++L N E V++
Sbjct: 639 MLFNIETYRAAMLEFKINMSEMPLGK-LSKENIQKGFEALTEIQNLLGNTNNQELAVRES 697
Query: 293 LILTLTNSFYTHIPHSFGLADPPLLDNKQLVVQKMEMIDAM-----TQKLL------DVK 341
LI+ +N F+T IP P ++ ++ ++ K++M++A+ KL+ D
Sbjct: 698 LIVAASNRFFTLIPS----IHPHIIQDEDDLMVKVKMLEALQDIEIASKLVGFDSDNDES 753
Query: 342 YEDTSKSKKVKVEPMDIECSLEKPVAALVE-LLFDEKAMTATLKEYELDMDRM 393
+D K + + P+ +C K LVE L + A T KE+ L+++ +
Sbjct: 754 LDDKYKKLRCAITPLPHDCEDYK----LVEKYLLNTHA--PTHKEWSLELEEV 800
Score = 38.5 bits (88), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 17/39 (43%), Positives = 24/39 (61%)
Query: 1 MSKHAKPFECDYAKSNRAKCKGCKDTIIQGTLRLAVMVQ 39
M+ K ++ +YAKS R+ CK C+ I + LRL MVQ
Sbjct: 1 MAAPPKAWKAEYAKSGRSSCKSCRSPIGKDQLRLGKMVQ 39
>sp|Q9ZSV1|PARP1_MAIZE Poly [ADP-ribose] polymerase 1 OS=Zea mays GN=PARP1 PE=2 SV=1
Length = 980
Score = 243 bits (620), Expect = 4e-63, Method: Compositional matrix adjust.
Identities = 148/424 (34%), Positives = 232/424 (54%), Gaps = 57/424 (13%)
Query: 338 LDVKYEDTSKSKKVKVEPMDIECSLEKPVAALVELLFDEKAMTATLKEYELDMDRMPLGK 397
LDV Y K+ + M + SL + L+++LF+ + A + E+E++M MPLGK
Sbjct: 610 LDVDYGVKKAPKRKDISEM--KSSLAPQLLELMKMLFNVETYRAAMMEFEINMSEMPLGK 667
Query: 398 LSAKHLAQGYSILNEVISVLDRNAEAD--VKDRLILTLTNSFYTHIPHSFGLADPPLLDN 455
LS +++ +G+ L E+ ++L A+ V++ LI+ +N F+T IP P ++ +
Sbjct: 668 LSKENIEKGFEALTEIQNLLKDTADQALAVRESLIVAASNRFFTLIPS----IHPHIIRD 723
Query: 456 KQLVVQKMEMIDAMTQIELAYTIKQEGPSAGVHPLVNCYEKLQANIKSVDTSHPHYEIIH 515
+ ++ K +M++A+ IE+A I + Y KL +I + Y++I
Sbjct: 724 EDDLMIKAKMLEALQDIEIASKIVGFDSDSDESLDDK-YMKLHCDITPLAHDSEDYKLIE 782
Query: 516 KYVQNTHAKTHREYSLNIEAIFEVSRHGEDKRFKPFEK-LGNKHLLWHGSRLTNFASIIS 574
+Y+ NTHA TH+++SL +E +F + R GE ++ ++ L NK LLWHGSRLTNF I+S
Sbjct: 783 QYLLNTHAPTHKDWSLELEEVFSLDRDGELNKYSRYKNNLHNKMLLWHGSRLTNFVGILS 842
Query: 575 KGLCIAPPEAPVTGYMFGKGIYFADSVSKSANYCMTNSTNNVGLLLLCEVALGKVVLRYM 634
+GL IAPPEAPVTGYMFGKG+YFAD VSKSA YC + N VGL+LL EVALG +
Sbjct: 843 QGLRIAPPEAPVTGYMFGKGLYFADLVSKSAQYCYVDRNNPVGLMLLSEVALGDM----- 897
Query: 635 FGKGIYFADSVSKSANYCMTNSTNNVGLLLLCEVALGKVVKKTQAEFVTKLPNGFHSVQG 694
Y + +T+ + K P G HS +G
Sbjct: 898 ----------------YELKKATS-----------------------MDKPPRGKHSTKG 918
Query: 695 QGRNCPDPKGSIVLDNNITVPLGTLIDLPRDQAKNLSLLYNEFIVYDPAQVKIRYILKVR 754
G+ P + +++ VP G + ++ L+YNE+IVY+ +QVK++++LKVR
Sbjct: 919 LGKTVPLESEFVKWRDDVVVPCGKPVP---SSIRSSELMYNEYIVYNTSQVKMQFLLKVR 975
Query: 755 FNYK 758
F++K
Sbjct: 976 FHHK 979
Score = 79.7 bits (195), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 78/281 (27%), Positives = 136/281 (48%), Gaps = 23/281 (8%)
Query: 56 EKSVFKSKSGTVKLQIKDGLAVDPDSGLADTTELVKYFDDRYLNAVMGKTDVAAGKNSFY 115
E ++ SK TV +++K AV SGL DT +++ Y NA + +D+A G NS+Y
Sbjct: 477 ENALESSKGSTVTVKVKGRSAVHESSGLQDTAHILEDGKSIY-NATLNMSDLALGVNSYY 535
Query: 116 KLQVLKSKIHKEKYYLFRAWGRIGTS-IGGTKVQDFKDVESAFDEFDRCFEKETGNTSGK 174
LQ+++ E Y+FR WGR+G+ IGG K+++ E A EF R F ++TGN+
Sbjct: 536 VLQIIEQDDGSE-CYVFRKWGRVGSEKIGGQKLEEMSKTE-AIKEFKRLFLEKTGNSW-- 591
Query: 175 DAKQKLTASILRLGGDTVSDVRSHVAAAIATKAAVENMEEGGKGARAMEELKEYGIHVVP 234
+A + T + G DV V A K E L + ++
Sbjct: 592 EAWECKTNFRKQPGRFYPLDVDYGVKKAPKRKDISE----------MKSSLAPQLLELMK 641
Query: 235 SKFIKDAANGKVLELIEKMNLAPWGSDDSAKHLAQGYSILNEVISVLDRNAEA--DVKDR 292
F + ++E M+ P G S +++ +G+ L E+ ++L A+ V++
Sbjct: 642 MLFNVETYRAAMMEFEINMSEMPLGK-LSKENIEKGFEALTEIQNLLKDTADQALAVRES 700
Query: 293 LILTLTNSFYTHIPHSFGLADPPLLDNKQLVVQKMEMIDAM 333
LI+ +N F+T IP P ++ ++ ++ K +M++A+
Sbjct: 701 LIVAASNRFFTLIPS----IHPHIIRDEDDLMIKAKMLEAL 737
Score = 40.8 bits (94), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 18/39 (46%), Positives = 24/39 (61%)
Query: 1 MSKHAKPFECDYAKSNRAKCKGCKDTIIQGTLRLAVMVQ 39
M+ K ++ +YAKS RA CK C+ I + LRL MVQ
Sbjct: 1 MAAPPKAWKAEYAKSGRASCKSCRSPIAKDQLRLGKMVQ 39
>sp|Q9N4H4|PME1_CAEEL Poly(ADP-ribose) polymerase pme-1 OS=Caenorhabditis elegans
GN=pme-1 PE=2 SV=1
Length = 945
Score = 242 bits (618), Expect = 8e-63, Method: Compositional matrix adjust.
Identities = 146/402 (36%), Positives = 219/402 (54%), Gaps = 55/402 (13%)
Query: 362 LEKPVAALVELLFDEKAMTATLKEYELDMDRMPLGKLSAKHLAQGYSILNEVISVLDRNA 421
L K V +V +FD + M + LK +E+D+++MPLG+LS + + +LN++ +L
Sbjct: 589 LPKSVKEVVMSIFDVENMKSALKSFEMDVNKMPLGRLSHNQINLAFEVLNDISDLL---V 645
Query: 422 EADVKDRLILTLTNSFYTHIPHSFGLADPPLLDNKQLVVQKMEMIDAMTQIELAYTIKQE 481
+ + IL +N FYT IPH+FG+ P +D+ + +K M++A+ I+ AY
Sbjct: 646 KLPIDASRILDFSNKFYTIIPHNFGMRVPEPIDSFHKIKEKNNMLNALLDIKFAYDQISG 705
Query: 482 G-----PSAGVHPLVNCYEKLQANIKSVDTSHPHYEIIHKYVQNTHAKTHREYSLNIEAI 536
G S G+ P+ Y+KL+ ++ + + +IH+Y++NTH TH + + + I
Sbjct: 706 GDVPASTSLGIDPVDINYQKLKCIMEPLQQGCDDWNMIHQYLKNTHGATH-DLKVELIDI 764
Query: 537 FEVSRHGEDKRFKPFEKLGNKHLLWHGSRLTNFASIISKGLCIAPPEAPVTGYMFGKGIY 596
+++R E +FK +GN+ LLWHGS NFA I+ +GL IAPPEAPV+GYMFGKG+Y
Sbjct: 765 LKLNRDNESSKFK--RHIGNRRLLWHGSGKMNFAGILGQGLRIAPPEAPVSGYMFGKGVY 822
Query: 597 FADSVSKSANYCMTNSTNNVGLLLLCEVALGKVVLRYMFGKGIYFADSVSKSANYCMTNS 656
FAD SKS YC N+ LLLC+VALG
Sbjct: 823 FADMFSKSFFYCRANAKEE-AYLLLCDVALG----------------------------- 852
Query: 657 TNNVGLLLLCEVALGKVVKKTQAEFVTKLPNGFHSVQGQGRNCPDPKGSIVLDNNITVPL 716
NV L+ A V ++T LP GF SVQG GR CP GS + T+PL
Sbjct: 853 --NVQQLM----ASKNVSRQT-------LPAGFQSVQGLGRQCPREIGSYNHPDGYTIPL 899
Query: 717 G-TLIDLPRDQAKNLSLLYNEFIVYDPAQVKIRYILKVRFNY 757
G T + L Q + LLYNEFIVYD Q++++Y+++V+ ++
Sbjct: 900 GLTYMQLQGKQDVDYHLLYNEFIVYDVDQIQLKYLVRVKMHH 941
Score = 101 bits (252), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 84/297 (28%), Positives = 138/297 (46%), Gaps = 33/297 (11%)
Query: 71 IKDGLAVDPDSGLADTTELVK-YFDDRYLNAVMGKTDVAAGKNSFYKLQVLKSKIHKEKY 129
IK G VD LAD + K D A + TD+ KNS+YK+Q+LK +E Y
Sbjct: 449 IKKGTVVDAKFALADRCHVFKNEIDGSLYQATLSFTDLTQNKNSYYKIQLLKDD-QRENY 507
Query: 130 YLFRAWGRIGTSIGGTKVQDFKDVESAFDEFDRCFEKETGNTSGKDAKQKLTASILRLGG 189
Y+FR+WGR+GT +GG K + + + A +F F ++T N I R
Sbjct: 508 YVFRSWGRVGTEVGGNKHESYSNSNEAILKFQDVFHEKTKND-----------WIYRKHF 556
Query: 190 DTVSDVRSHVAAAIATKAAVENME-EGGKGARAMEELKEYGIHVVPSKFIKDAANGKVLE 248
+ + S+V + A + + E G + +KE + + + +K A K E
Sbjct: 557 RKMPGMFSYVETDYSEFAQITDTEITPGSKTLLPKSVKEVVMSIFDVENMKSAL--KSFE 614
Query: 249 LIEKMNLAPWGSDDSAKHLAQGYSILNEVISVLDRNAEADVKDRLILTLTNSFYTHIPHS 308
+ +N P G S + + +LN++ +L + + IL +N FYT IPH+
Sbjct: 615 M--DVNKMPLGR-LSHNQINLAFEVLNDISDLL---VKLPIDASRILDFSNKFYTIIPHN 668
Query: 309 FGLADPPLLDNKQLVVQKMEMIDAMTQKLLDVKYE-------DTSKSKKVKVEPMDI 358
FG+ P +D+ + +K M++A LLD+K+ D S + ++P+DI
Sbjct: 669 FGMRVPEPIDSFHKIKEKNNMLNA----LLDIKFAYDQISGGDVPASTSLGIDPVDI 721
Score = 33.5 bits (75), Expect = 6.3, Method: Compositional matrix adjust.
Identities = 13/30 (43%), Positives = 19/30 (63%)
Query: 7 PFECDYAKSNRAKCKGCKDTIIQGTLRLAV 36
P+ +YAKS R+ CK CK I LR+++
Sbjct: 9 PYAIEYAKSGRSNCKTCKKNIALDQLRMSM 38
>sp|Q9Y6F1|PARP3_HUMAN Poly [ADP-ribose] polymerase 3 OS=Homo sapiens GN=PARP3 PE=1 SV=3
Length = 533
Score = 167 bits (423), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 127/437 (29%), Positives = 214/437 (48%), Gaps = 73/437 (16%)
Query: 337 LLDVKYEDTSKSKKVKVEPMDIE--------CSLEKPVAALVELLFDEKAMTATLKEYEL 388
L++V+ ED ++ VKV+ + CSL+ L+ +F ++ T+ +L
Sbjct: 152 LIEVQAEDEAQEAVVKVDRGPVRTVTKRVQPCSLDPATQKLITNIFSKEMFKNTMALMDL 211
Query: 389 DMDRMPLGKLSAKHLAQGYSILNEVISVLDRNAEADVKDRLILTLTNSFYTHIPHSFGLA 448
D+ +MPLGKLS + +A+G+ L + L + + + L++ FYT IPH+FG +
Sbjct: 212 DVKKMPLGKLSKQQIARGFEALEALEEALKGPTDGG---QSLEELSSHFYTVIPHNFGHS 268
Query: 449 DPPLLDNKQLVVQKMEMIDAMTQIELAYTIK----QEGPSAGV-HPLVNCYEKLQANIKS 503
PP +++ +L+ K +M+ + IELA ++ QE V HPL Y+ L+ ++
Sbjct: 269 QPPPINSPELLQAKKDMLLVLADIELAQALQAVSEQEKTVEEVPHPLDRDYQLLKCQLQL 328
Query: 504 VDTSHPHYEIIHKYVQNTHAKTHREYSLNIEAIFEVSRHGEDKRFKPFEKLGNKHLLWHG 563
+D+ P Y++I Y++ T HR +L + I++V++ GE+ RF+ KLGN+ LLWHG
Sbjct: 329 LDSGAPEYKVIQTYLEQT-GSNHRCPTL--QHIWKVNQEGEEDRFQAHSKLGNRKLLWHG 385
Query: 564 SRLTNFASIISKGLCIAPPEAPVTGYMFGKGIYFADSVSKSANYC--MTNSTNNVGLLLL 621
+ + A+I++ GL I P +G GKGIYFA SKSA Y M ++VG + L
Sbjct: 386 TNMAVVAAILTSGLRI----MPHSGGRVGKGIYFASENSKSAGYVIGMKCGAHHVGYMFL 441
Query: 622 CEVALGKVVLRYMFGKGIYFADSVSKSANYCMTNSTNNVGLLLLCEVALGKVVKKTQAEF 681
EVALG+ ++ T++ +
Sbjct: 442 GEVALGR--------------------EHHINTDNPS----------------------- 458
Query: 682 VTKLPNGFHSVQGQGRNCPDPKGSIVLD---NNITVPLGTLIDLPRDQAKNLSLLYNEFI 738
+ P GF SV +G PDP L+ + VP G + P + S +E++
Sbjct: 459 LKSPPPGFDSVIARGHTEPDPTQDTELELDGQQVVVPQGQPVPCPEFSSSTFS--QSEYL 516
Query: 739 VYDPAQVKIRYILKVRF 755
+Y +Q ++RY+L+V
Sbjct: 517 IYQESQCRLRYLLEVHL 533
Score = 45.8 bits (107), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 67/308 (21%), Positives = 126/308 (40%), Gaps = 59/308 (19%)
Query: 46 EAKDVKLKSQEKSVFKSKSGTVKL--QIKDGLAVDPDSGLADTTELVKYFDDRYLNAVMG 103
E K + +E+ F+S + +K K + VDP L+ Y D N +
Sbjct: 15 EKKKGRQAGREEDPFRSTAEALKAIPAEKRIIRVDPTCPLSSNPGTQVYED---YNCTLN 71
Query: 104 KTDVAAGKNSFYKLQVLKSKIHKEKYYLFRAWGRIGTSIGGTKVQDFKDVESAFDEFDRC 163
+T++ N FY +Q+L+ + + WGR+G +G +K+ F +E A +F++
Sbjct: 72 QTNIENNNNKFYIIQLLQDS--NRFFTCWNHWGRVG-EVGQSKINHFTRLEDAKKDFEKK 128
Query: 164 FEKETGNT-------------------SGKDAKQKLTASILRLGGDTVSDVRSHVAAAIA 204
F ++T N +D Q+ + R TV+ + A
Sbjct: 129 FREKTKNNWAERDHFVSHPGKYTLIEVQAEDEAQEAVVKVDRGPVRTVTKRVQPCSLDPA 188
Query: 205 TKAAVENM--EEGGKGARAMEELKEYGIHVVPSKFIKDAANGKVLELIEKMNLAPWGSDD 262
T+ + N+ +E K A+ +L +K GK+
Sbjct: 189 TQKLITNIFSKEMFKNTMALMDLD-----------VKKMPLGKL---------------- 221
Query: 263 SAKHLAQGYSILNEVISVLDRNAEADVKDRLILTLTNSFYTHIPHSFGLADPPLLDNKQL 322
S + +A+G+ L + L + + + L++ FYT IPH+FG + PP +++ +L
Sbjct: 222 SKQQIARGFEALEALEEALKGPTDGG---QSLEELSSHFYTVIPHNFGHSQPPPINSPEL 278
Query: 323 VVQKMEMI 330
+ K +M+
Sbjct: 279 LQAKKDML 286
>sp|Q08824|PARP1_ONCMA Poly [ADP-ribose] polymerase 1 (Fragment) OS=Oncorhynchus masou
GN=parp1 PE=2 SV=2
Length = 135
Score = 145 bits (366), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 69/133 (51%), Positives = 95/133 (71%), Gaps = 1/133 (0%)
Query: 462 KMEMIDAMTQIELAYTIKQEGPSAGVH-PLVNCYEKLQANIKSVDTSHPHYEIIHKYVQN 520
K+EM+D + IE+AY++ + G P+ YEKL+ I+ VD + EII +YV+N
Sbjct: 3 KVEMLDNLLDIEVAYSLLKGGAEDNKKDPIDINYEKLKTKIEVVDKTTKEAEIILQYVKN 62
Query: 521 THAKTHREYSLNIEAIFEVSRHGEDKRFKPFEKLGNKHLLWHGSRLTNFASIISKGLCIA 580
THA TH Y+L +E IF++ R GE ++++PF+ L N+ LLWHGSR TN+A I+S+GL IA
Sbjct: 63 THAATHNTYTLVVEEIFKIVREGEYQKYRPFQDLPNRQLLWHGSRATNYAGILSQGLRIA 122
Query: 581 PPEAPVTGYMFGK 593
PPEAPVTGYMFGK
Sbjct: 123 PPEAPVTGYMFGK 135
>sp|Q1SGF1|PARP3_MEDTR Putative poly [ADP-ribose] polymerase 3 OS=Medicago truncatula
GN=PARP3 PE=3 SV=1
Length = 799
Score = 115 bits (289), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 108/405 (26%), Positives = 172/405 (42%), Gaps = 56/405 (13%)
Query: 360 CSLEKPVAALVELLFDEKAMTATLKEYELDMDRMPLGKLSAKHLAQGYSILNEVISVLDR 419
C LE VA +++L ++ L E D +P+G ++ HL + IL E I +
Sbjct: 437 CKLEPMVANFMKVLCSQEIYKYALMEMGYDSPDLPIGMVTNLHLKRCEEILLEFIEKVKT 496
Query: 420 NAEADVKDRLILTLTNSFYTHIPHSFGLADPPLL--DNKQLVVQKMEMIDAMTQIELA-Y 476
E K I + + + + HS P + D +++ ++ + I LA +
Sbjct: 497 LKETGPKADAIWSDFSQKWFTLMHSTR----PFIFRDYQEIADHAAAALEGVRDITLASH 552
Query: 477 TIKQEGPSAGVHPLVNCYEKLQANIKSVDTSHPHYEIIHKYVQNTHAKTHR---EYSLNI 533
I S PL + Y+KL +I ++ + YE+I KY++ T+ EY +++
Sbjct: 553 LIGDMSGSTIDDPLSDTYKKLGCSITPLEKNSNDYEMIVKYLEKTYEPVKVGDIEYGVSV 612
Query: 534 EAIFEVSRHGEDKRFKPFEKLGNKHLLWHGSRLTNFASIISKGLCIAPPEAPVTGYMFGK 593
E IF V + K+ NK LLW GSR +N + KG A PV GYMFGK
Sbjct: 613 ENIFTVESSA-CPSYADIVKMPNKVLLWCGSRSSNLLRHLHKGFLPAICSLPVPGYMFGK 671
Query: 594 GIYFADSVSKSANYCMTNSTNNVGLLLLCEVALGKVVLRYMFGKGIYFADSVSKSANYCM 653
I +D+ +++A Y T G L+L +LG
Sbjct: 672 AIVCSDAAAEAARYGFTAVDRPEGFLVLAIASLG-------------------------- 705
Query: 654 TNSTNNVGLLLLCEVALGKVVKKTQAEFVTKLPNGFHSVQGQGRNCPDPKGSIVLDNNIT 713
N + L K+ E T L V+G G+ D V ++I
Sbjct: 706 ----NEITEL------------KSPPEDTTSLEEKKVGVKGLGKKKTDESEHFVWKDDIK 749
Query: 714 VPLGTLIDLPRDQAKNLSLLYNEFIVYDPAQVKIRYILKVRFNYK 758
VP G++I + ++ L YNE+ VYDP QV+I Y++ V++ K
Sbjct: 750 VPCGSII---ASEHEDSPLEYNEYAVYDPKQVRISYLVGVKYEEK 791
>sp|Q9SWB4|PARP3_SOYBN Poly [ADP-ribose] polymerase 3 OS=Glycine max GN=PARP3 PE=2 SV=1
Length = 815
Score = 114 bits (285), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 107/405 (26%), Positives = 169/405 (41%), Gaps = 56/405 (13%)
Query: 360 CSLEKPVAALVELLFDEKAMTATLKEYELDMDRMPLGKLSAKHLAQGYSILNEVISVLDR 419
C LE VA +++L ++ L E D +P+G ++ HL + +L E I +
Sbjct: 450 CKLEPLVANFMKVLCSQEIYKYALMEMGYDCPDLPIGMVTNLHLKKCEDVLLEFIDKVKS 509
Query: 420 NAEADVKDRLILT-LTNSFYT--HIPHSFGLADPPLLDNKQLVVQKMEMIDAMTQIELAY 476
E K + T + ++T H F D + + +E + +TQ ++
Sbjct: 510 LKETGPKAEAVWTDFSQRWFTLMHSTRPFNFRDYQEIADH--AAAALEGVRDITQA--SH 565
Query: 477 TIKQEGPSAGVHPLVNCYEKLQANIKSVDTSHPHYEIIHKYVQNTHAKTHR---EYSLNI 533
I S PL Y+KL +I ++D S YE+I KY++ T+ EY +++
Sbjct: 566 LIGDMTGSTIDDPLSETYKKLGCSISALDKSSDDYEMIVKYLEKTYEPVKVGDIEYGVSV 625
Query: 534 EAIFEVSRHGEDKRFKPFEKLGNKHLLWHGSRLTNFASIISKGLCIAPPEAPVTGYMFGK 593
E IF V G ++ KL NK LLW GSR +N + KG A P+ GYMFGK
Sbjct: 626 ENIFAVQTGG-CPSYEDIIKLPNKVLLWCGSRSSNLLRHLQKGFLPAICSLPIPGYMFGK 684
Query: 594 GIYFADSVSKSANYCMTNSTNNVGLLLLCEVALGKVVLRYMFGKGIYFADSVSKSANYCM 653
I +D+ +++A Y T G L+L +LG
Sbjct: 685 AIVCSDAAAEAARYGFTAVDRPEGFLVLAIASLG-------------------------- 718
Query: 654 TNSTNNVGLLLLCEVALGKVVKKTQAEFVTKLPNGFHSVQGQGRNCPDPKGSIVLDNNIT 713
N + L KT E + L V+G G+ D V ++I
Sbjct: 719 ----NEITEL------------KTPPEDASSLEEKKVGVKGPGKKKTDESEHFVWKDDIK 762
Query: 714 VPLGTLIDLPRDQAKNLSLLYNEFIVYDPAQVKIRYILKVRFNYK 758
VP G L+ ++ L YNE+ VYD + +I Y++ V++ K
Sbjct: 763 VPCGKLV---ASDHQDSPLEYNEYAVYDKKRARISYLVGVKYEEK 804
>sp|Q0E0Q3|PARP3_ORYSJ Poly [ADP-ribose] polymerase 3 OS=Oryza sativa subsp. japonica
GN=PARP3 PE=2 SV=1
Length = 831
Score = 112 bits (279), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 98/401 (24%), Positives = 167/401 (41%), Gaps = 52/401 (12%)
Query: 360 CSLEKPVAALVELLFDEKAMTATLKEYELDMDRMPLGKLSAKHLAQGYSILNEVISVLDR 419
C L+ V +++ L ++ L E D+ +P+G L+ HL +G L E ++
Sbjct: 467 CKLDPSVTFIMKQLCSQEIYRYALTEMGHDVPDLPIGMLTDLHLKRGEETLLEWKQDVES 526
Query: 420 NAEAD-VKDRLILTLTNSFYTHIPHSFGLADPPLLDNKQLVVQKMEMIDAMTQIELAYTI 478
E+ D + ++N ++T P + + +Q+ ++ + I +A +
Sbjct: 527 APESGPAADAFWMEISNKWFTLFPTTRPYT---MKGYEQIADNVASGLETVRDINVASRL 583
Query: 479 KQEGPSAGVH-PLVNCYEKLQANIKSVDTSHPHYEIIHKYVQNTHAKTHRE---YSLNIE 534
+ + + PL CY+KL +I V Y++I KY++ T+ YS +E
Sbjct: 584 IGDVFGSTLDDPLSQCYKKLGCSINRVVEDSEDYKMILKYLEKTYEPVKVGDVVYSATVE 643
Query: 535 AIFEVSRHGEDKRFKPFEKLGNKHLLWHGSRLTNFASIISKGLCIAPPEAPVTGYMFGKG 594
I+ V + +KL NK LLW G+R +N + G A PV GYMFGK
Sbjct: 644 RIYAVESSAL-PSYDEIKKLPNKVLLWCGTRSSNLLRHLRDGFVPAVCHIPVPGYMFGKA 702
Query: 595 IYFADSVSKSANYCMTNSTNNVGLLLLCEVALGKVVLRYMFGKGIYFADSVSKSANYCMT 654
I +D+ +++A Y T G L+L +LGK +
Sbjct: 703 IVCSDAAAEAALYGFTAVDRPEGYLVLAVASLGKEIQ----------------------- 739
Query: 655 NSTNNVGLLLLCEVALGKVVKKTQAEFVTKLPNGFHSVQGQGRNCPDPKGSIVLDNNITV 714
++ +E V ++ V+G GR DP + +TV
Sbjct: 740 -----------------EITGTPGSEDVKRMEEKKMGVKGVGRKTTDPSEHFTWRDGVTV 782
Query: 715 PLGTLIDLPRDQAKNLSLLYNEFIVYDPAQVKIRYILKVRF 755
P G L+ K+ L YNE+ VYDP QV I +++ V++
Sbjct: 783 PCGKLVP---STNKDGPLEYNEYAVYDPKQVSIAFLVGVKY 820
>sp|Q9FK91|PARP3_ARATH Poly [ADP-ribose] polymerase 3 OS=Arabidopsis thaliana GN=PARP3
PE=2 SV=2
Length = 814
Score = 111 bits (278), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 100/403 (24%), Positives = 166/403 (41%), Gaps = 52/403 (12%)
Query: 360 CSLEKPVAALVELLFDEKAMTATLKEYELDMDRMPLGKLSAKHLAQGYSILNEVISVLDR 419
C L+ VA +++L ++ L E LD +P+G L+ HL + +L E + +
Sbjct: 450 CKLDSFVANFIKVLCGQEIYNYALMELGLDPPDLPMGMLTDIHLKRCEEVLLEFVEKVKT 509
Query: 420 NAEADVKDRLILTLTNSFYTHIPHSFGLADPPLLDNKQLVVQKMEMIDAMTQIELAYTIK 479
E K + +S + + HS L D +L + + I A +
Sbjct: 510 TKETGQKAEAMWADFSSRWFSLMHSTRPMR--LHDVNELADHAASAFETVRDINTASRLI 567
Query: 480 QEGPSAGVH-PLVNCYEKLQANIKSVDTSHPHYEIIHKYVQNTHAK---THREYSLNIEA 535
+ + PL + Y+KL I VD Y+++ KY++ T+ + EY ++++
Sbjct: 568 GDMRGDTLDDPLSDRYKKLGCKISVVDKESEDYKMVVKYLETTYEPVKVSDVEYGVSVQN 627
Query: 536 IFEVSRHGEDKRFKPFEKLGNKHLLWHGSRLTNFASIISKGLCIAPPEAPVTGYMFGKGI 595
+F V +KL NK LLW GSR +N I KG A PV GYMFG+ I
Sbjct: 628 VFAVESDA-IPSLDDIKKLPNKVLLWCGSRSSNLLRHIYKGFLPAVCSLPVPGYMFGRAI 686
Query: 596 YFADSVSKSANYCMTNSTNNVGLLLLCEVALGKVVLRYMFGKGIYFADSVSKSANYCMTN 655
+D+ +++A Y T G L+L +LG+ V +
Sbjct: 687 VCSDAAAEAARYGFTAVDRPEGFLVLAVASLGEEVTEFT--------------------- 725
Query: 656 STNNVGLLLLCEVALGKVVKKTQAEFVTKLPNGFHSVQGQGRNCPDPKGSIVLDNNITVP 715
+ E L + V+G GR + + ++I VP
Sbjct: 726 ---------------------SPPEDTKTLEDKKIGVKGLGRKKTEESEHFMWRDDIKVP 764
Query: 716 LGTLIDLPRDQAKNLSLLYNEFIVYDPAQVKIRYILKVRFNYK 758
G L+ + K+ L YNE+ VYDP Q IR++++V++ K
Sbjct: 765 CGRLVP---SEHKDSPLEYNEYAVYDPKQTSIRFLVEVKYEEK 804
>sp|Q9TXQ1|PME5_CAEEL Poly(ADP-ribose) polymerase pme-5 OS=Caenorhabditis elegans GN=pme-5
PE=2 SV=1
Length = 2276
Score = 95.9 bits (237), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 79/307 (25%), Positives = 143/307 (46%), Gaps = 54/307 (17%)
Query: 357 DIECSLEK-----PVAALVELLFDEKAMTATLKEY--ELDM---DRMPLGKLSAKHLAQG 406
+IE + +K P+ ++ + D K TLK Y ++ M P G+ + +++ +
Sbjct: 1903 EIELTWKKNTEKDPIRRMIADISDAK----TLKTYASQVQMYGGSSQPFGRFTKENIEKA 1958
Query: 407 YSILNEVISVLDRNA--------------EADVKDRLILT--LTNSFYTHIPHS-FGLAD 449
+L++ L++NA E+++ D I T L+ +Y+ IP + ++
Sbjct: 1959 KLVLDK----LEKNANRIKQMVEAQTGVVESNLLDAYITTSELSGDYYSLIPSGEYEFSN 2014
Query: 450 PPLLDNKQLVVQ------KMEMIDAMTQIELAYTIKQEGPSAG-VHPLVNCYEKLQANIK 502
LDN + + + + + I+ T++ A +Q+ + + C +L+
Sbjct: 2015 LTRLDNVEEIARHRARLNRCQEIETATRLLCAAEFRQDLDRVDYIRSAIQCEYRLET--- 2071
Query: 503 SVDTSHPHYEIIHKYVQNTHAKTHREYSLNIEAIFEVSRHGEDKRFKPFEKLGNKHLLWH 562
P +I + +Q H ++ ++ I E+S ++F+PF N+ LWH
Sbjct: 2072 ------PDSDISQRLLQWIHNSGGKQ--AKVKMILEISPMLSTEKFEPFVNDDNQKFLWH 2123
Query: 563 GSRLTNFASIISKGLCIAPPEAPVTGYMFGKGIYFADSVSKSANYCMTNSTNNVGLLLLC 622
G++ TN SI+ G I PP A G +FG GIY ADS KS +YC S + +L+C
Sbjct: 2124 GTKATNLMSILKNGFLIDPPSACKNGNLFGSGIYLADSFEKSTHYCQP-SAGGINYMLVC 2182
Query: 623 EVALGKV 629
+ ALGKV
Sbjct: 2183 QTALGKV 2189
Score = 60.5 bits (145), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 32/95 (33%), Positives = 54/95 (56%), Gaps = 6/95 (6%)
Query: 81 SGLADTTELVKYFDD--RYLNAVMGKTDVAAGK---NSFYKLQVLKSKIHKEKYYLFRAW 135
S T LV + D+ +Y + +M KTD+ G+ ++FY++Q++K + E + LF W
Sbjct: 1781 SSTYSTNGLVSFCDETQQYFDVLMNKTDLMYGRCGFHNFYRMQIIKRR-DAELFILFTNW 1839
Query: 136 GRIGTSIGGTKVQDFKDVESAFDEFDRCFEKETGN 170
GRIG+ +G + F +E A EF F+ ++GN
Sbjct: 1840 GRIGSGMGEFQTTPFNSLELAAKEFKSIFKSKSGN 1874
>sp|Q09525|PME2_CAEEL Poly(ADP-ribose) polymerase pme-2 OS=Caenorhabditis elegans
GN=pme-2 PE=2 SV=1
Length = 538
Score = 94.0 bits (232), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 88/306 (28%), Positives = 132/306 (43%), Gaps = 50/306 (16%)
Query: 369 LVELLFDEKAMTATLKEYELDMD-RMPLGKLSAKHLAQGYSILNEVISVL-------DRN 420
L++ + DE LK+ + + P+ LS L GY IL+++ +
Sbjct: 158 LMKCICDEDVHLGLLKQLKFNEAFGRPIDCLSLAQLTTGYEILSKIEESIGGKSARRSTR 217
Query: 421 AEADVKDRLI--------LTLTNSFYTHIPHSFGLADPPLLDNKQLVVQKMEMIDAMT-Q 471
V DR++ L N +Y+ IPHSFG PP +D+ + + E++DA+
Sbjct: 218 GRPRVADRVLAVKSDGPSLHDINKYYSLIPHSFGFCVPPKIDSHAKIQAERELLDALKGS 277
Query: 472 IELAYTIKQEGPSAGVHPLVN-CYEKLQANIKSVDTSHPHYEIIHKY--VQNTHAKTHRE 528
IE + +K +A + YE+L +++ V EI K TH
Sbjct: 278 IEASLELKDLKKTASSKDIYQRLYERLPCHLEPVSE-----EIAGKIGDCLAMRGPTHC- 331
Query: 529 YSLNIEAIFEVSRHGEDKRFKPFE------KLG---------------NKHLLWHGSRLT 567
Y L++ FE+ E P E K G K LLWHG+R+T
Sbjct: 332 YKLSLIDAFELKDPNEIPTEAPVEVQEVPKKRGRKSTKTAAPTVPPPTTKRLLWHGTRVT 391
Query: 568 NFASIISKGLCIAPPEAPVTGYMFGKGIYFADSVSKSANYCMTNSTNNVGLLLLCEVALG 627
N SI+ GL P G MFG G+YFA+ +KSANYC ++ V +LLCEV
Sbjct: 392 NVFSILMNGLQF--PVGDRCGLMFGNGVYFANVPTKSANYCCPEASKRV-FMLLCEVETA 448
Query: 628 KVVLRY 633
++ Y
Sbjct: 449 NPLVLY 454
Score = 38.9 bits (89), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 24/86 (27%), Positives = 39/86 (45%), Gaps = 15/86 (17%)
Query: 263 SAKHLAQGYSILNEVISVL-------DRNAEADVKDRLI--------LTLTNSFYTHIPH 307
S L GY IL+++ + V DR++ L N +Y+ IPH
Sbjct: 189 SLAQLTTGYEILSKIEESIGGKSARRSTRGRPRVADRVLAVKSDGPSLHDINKYYSLIPH 248
Query: 308 SFGLADPPLLDNKQLVVQKMEMIDAM 333
SFG PP +D+ + + E++DA+
Sbjct: 249 SFGFCVPPKIDSHAKIQAERELLDAL 274
>sp|Q9UKK3|PARP4_HUMAN Poly [ADP-ribose] polymerase 4 OS=Homo sapiens GN=PARP4 PE=1 SV=3
Length = 1724
Score = 81.3 bits (199), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 99/394 (25%), Positives = 161/394 (40%), Gaps = 90/394 (22%)
Query: 361 SLEKPVAALVELLFDEKAMTATLKEYELDMDRMPLGKLSAKHLAQGYSILNEVISVLDRN 420
+L + V+ LVE+++ E L E M P+ ++S +++ IL V + L
Sbjct: 258 TLSQEVSDLVEMIWAE-----ALGHLE-HMLLKPVNRISLNDVSKAEGILLLVKAALKNG 311
Query: 421 AEADVKDRLILTLTNSFYTHIPHSFGLADPPLLDNKQLVVQKMEMIDAMTQIELAYTIKQ 480
A+ +++ FY IPH + P N L+ +K ++ + +
Sbjct: 312 ETAEQLQKMM----TEFYRLIPHKGTM---PKEVNLGLLAKKADLCQLIRDMVNVCETNL 364
Query: 481 EGPSAGVHPLVNCYEKLQANIKSVDTSHPHYEIIHKYV-QNTHAKTHREYSLNIEAIFEV 539
P+ P + Y L+ I+ V+ + + + K V QN H+K+ +++ IF V
Sbjct: 365 SKPNP---PSLAKYRALRCKIEHVEQNTEEFLRVRKEVLQNHHSKS----PVDVLQIFRV 417
Query: 540 SRHGEDKRFKPFEKLGNKHLLWHGSRLTNFASIISKGLCIAPPEAPVTGYMFGKGIYFAD 599
R E F KLGN L HGS + N I+ +GL + + +G+ D
Sbjct: 418 GRVNETTEF--LSKLGNVRPLLHGSPVQNIVGILCRGLLLP-------KVVEDRGVQRTD 468
Query: 600 SVSKSANYCMTNSTNNVGLLLLCEVALGKVVLRYMFGKGIYFADSVSKSANYCMTNSTNN 659
VG L G GIYF+DS+S S Y T+
Sbjct: 469 ----------------VGNL----------------GSGIYFSDSLSTSIKYSHPGETDG 496
Query: 660 VGLLLLCEVALGKVVKKTQAEF-VTKLPNGFHSVQGQGRNCPDPKGSIVLDNNITVPLGT 718
LLL+C+VALGK + + +F +T+ P G+ SV G + S+ D
Sbjct: 497 TRLLLICDVALGKCMDLHEKDFSLTEAPPGYDSVHGVSQT-----ASVTTD--------- 542
Query: 719 LIDLPRDQAKNLSLLYNEFIVYDPAQVKIRYILK 752
+EF+VY QVK++YI+K
Sbjct: 543 -------------FEDDEFVVYKTNQVKMKYIIK 563
>sp|Q3UES3|TNKS2_MOUSE Tankyrase-2 OS=Mus musculus GN=Tnks2 PE=2 SV=2
Length = 1166
Score = 47.4 bits (111), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 42/140 (30%), Positives = 52/140 (37%), Gaps = 36/140 (25%)
Query: 556 NKHLLWHGSRLTNFASIISKGLCIAPPEAPVTGYMFGKGIYFADSVSKSANYCMTNSTNN 615
N+ +L+HGS N +II KG G MFG GIYFA++ SKS Y
Sbjct: 1025 NERMLFHGSPFVN--AIIHKGF---DERHAYIGGMFGAGIYFAENSSKSNQYV------- 1072
Query: 616 VGLLLLCEVALGKVVLRYMFGKGIYFADSVSKSANYCMTNSTNNVGLLLLCEVALGKVVK 675
Y G G +S C LL C V LGK
Sbjct: 1073 -----------------YGIGGGTGCPIHKDRSCYICHRQ-------LLFCRVTLGKSFL 1108
Query: 676 KTQAEFVTKLPNGFHSVQGQ 695
+ A + P G HSV G+
Sbjct: 1109 QFSAMKMAHSPPGHHSVTGR 1128
>sp|Q9H2K2|TNKS2_HUMAN Tankyrase-2 OS=Homo sapiens GN=TNKS2 PE=1 SV=1
Length = 1166
Score = 47.4 bits (111), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 42/140 (30%), Positives = 52/140 (37%), Gaps = 36/140 (25%)
Query: 556 NKHLLWHGSRLTNFASIISKGLCIAPPEAPVTGYMFGKGIYFADSVSKSANYCMTNSTNN 615
N+ +L+HGS N +II KG G MFG GIYFA++ SKS Y
Sbjct: 1025 NERMLFHGSPFVN--AIIHKGF---DERHAYIGGMFGAGIYFAENSSKSNQYV------- 1072
Query: 616 VGLLLLCEVALGKVVLRYMFGKGIYFADSVSKSANYCMTNSTNNVGLLLLCEVALGKVVK 675
Y G G +S C LL C V LGK
Sbjct: 1073 -----------------YGIGGGTGCPVHKDRSCYICHRQ-------LLFCRVTLGKSFL 1108
Query: 676 KTQAEFVTKLPNGFHSVQGQ 695
+ A + P G HSV G+
Sbjct: 1109 QFSAMKMAHSPPGHHSVTGR 1128
>sp|O55721|PARP_IIV6 Putative poly [ADP-ribose] polymerase-like 100L OS=Invertebrate
iridescent virus 6 GN=IIV6-100L PE=4 SV=1
Length = 181
Score = 45.8 bits (107), Expect = 0.001, Method: Composition-based stats.
Identities = 33/96 (34%), Positives = 53/96 (55%), Gaps = 7/96 (7%)
Query: 536 IFEVSRHGEDKRFKPF--EKLGNK-HLLWHGSRLTNFASIISKGLCIAPPEA-PVTGYMF 591
I+ V R E++ F + E + K LL HG+R ++ I+ GL I P + +G ++
Sbjct: 28 IYTVQRFKEEEPFNKYISESVSKKTRLLIHGTRCSSVIPILQTGLKIRPSTSVHFSGKVY 87
Query: 592 GKGIYFADSVSKSANYCMTNSTNNVGLLLLCEVALG 627
G+G YF++ V KS NY +N +LL+ EV +G
Sbjct: 88 GEGNYFSEHVQKSLNY---TGWDNDQILLIYEVHVG 120
>sp|Q6PFX9|TNKS1_MOUSE Tankyrase-1 OS=Mus musculus GN=Tnks PE=1 SV=1
Length = 1320
Score = 45.1 bits (105), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 32/91 (35%), Positives = 44/91 (48%), Gaps = 18/91 (19%)
Query: 556 NKHLLWHGSRLTNFASIISKGLCIAPPEAPVTGYMFGKGIYFADSVSKSANY-------- 607
N+ +L+HGS N +II KG G MFG GIYFA++ SKS Y
Sbjct: 1171 NERMLFHGSPFIN--AIIHKGF---DERHAYIGGMFGAGIYFAENSSKSNQYVYGIGGGT 1225
Query: 608 -CMTNSTNNVGL----LLLCEVALGKVVLRY 633
C T+ + + +L C V LGK L++
Sbjct: 1226 GCPTHKDRSCYICHRQMLFCRVTLGKSFLQF 1256
Score = 40.8 bits (94), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 26/75 (34%), Positives = 35/75 (46%), Gaps = 13/75 (17%)
Query: 634 MFGKGIYFADSVSKSANY---------CMTNSTNNVGL----LLLCEVALGKVVKKTQAE 680
MFG GIYFA++ SKS Y C T+ + + +L C V LGK +
Sbjct: 1200 MFGAGIYFAENSSKSNQYVYGIGGGTGCPTHKDRSCYICHRQMLFCRVTLGKSFLQFSTM 1259
Query: 681 FVTKLPNGFHSVQGQ 695
+ P G HSV G+
Sbjct: 1260 KMAHAPPGHHSVIGR 1274
>sp|O95271|TNKS1_HUMAN Tankyrase-1 OS=Homo sapiens GN=TNKS PE=1 SV=2
Length = 1327
Score = 45.1 bits (105), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 32/91 (35%), Positives = 44/91 (48%), Gaps = 18/91 (19%)
Query: 556 NKHLLWHGSRLTNFASIISKGLCIAPPEAPVTGYMFGKGIYFADSVSKSANY-------- 607
N+ +L+HGS N +II KG G MFG GIYFA++ SKS Y
Sbjct: 1178 NERMLFHGSPFIN--AIIHKGF---DERHAYIGGMFGAGIYFAENSSKSNQYVYGIGGGT 1232
Query: 608 -CMTNSTNNVGL----LLLCEVALGKVVLRY 633
C T+ + + +L C V LGK L++
Sbjct: 1233 GCPTHKDRSCYICHRQMLFCRVTLGKSFLQF 1263
Score = 40.4 bits (93), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 26/75 (34%), Positives = 35/75 (46%), Gaps = 13/75 (17%)
Query: 634 MFGKGIYFADSVSKSANY---------CMTNSTNNVGL----LLLCEVALGKVVKKTQAE 680
MFG GIYFA++ SKS Y C T+ + + +L C V LGK +
Sbjct: 1207 MFGAGIYFAENSSKSNQYVYGIGGGTGCPTHKDRSCYICHRQMLFCRVTLGKSFLQFSTM 1266
Query: 681 FVTKLPNGFHSVQGQ 695
+ P G HSV G+
Sbjct: 1267 KMAHAPPGHHSVIGR 1281
>sp|Q8N3A8|PARP8_HUMAN Poly [ADP-ribose] polymerase 8 OS=Homo sapiens GN=PARP8 PE=2 SV=1
Length = 854
Score = 38.9 bits (89), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 23/76 (30%), Positives = 35/76 (46%), Gaps = 1/76 (1%)
Query: 543 GEDKRFKPFEKLGNKHLLWHGSRLTNFASIISKGLCIAP-PEAPVTGYMFGKGIYFADSV 601
++ F+ +KL +HGS + N+ SI+ GL +A + G M+G GIY +
Sbjct: 678 AKESNFRAAKKLFGSTFAFHGSHIENWHSILRNGLVVASNTRLQLHGAMYGSGIYLSPMS 737
Query: 602 SKSANYCMTNSTNNVG 617
S S Y N V
Sbjct: 738 SISFGYSGMNKKQKVS 753
>sp|Q3UD82|PARP8_MOUSE Poly [ADP-ribose] polymerase 8 OS=Mus musculus GN=Parp8 PE=2 SV=1
Length = 852
Score = 38.5 bits (88), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 23/75 (30%), Positives = 35/75 (46%), Gaps = 1/75 (1%)
Query: 543 GEDKRFKPFEKLGNKHLLWHGSRLTNFASIISKGLCIAP-PEAPVTGYMFGKGIYFADSV 601
++ F+ +KL +HGS + N+ SI+ GL +A + G M+G GIY +
Sbjct: 676 AKESNFRAAKKLFGSTFAFHGSHIENWHSILRNGLVVASNTRLQLHGAMYGSGIYLSPMS 735
Query: 602 SKSANYCMTNSTNNV 616
S S Y N V
Sbjct: 736 SISFGYSGMNKKQKV 750
>sp|Q9UFH2|DYH17_HUMAN Dynein heavy chain 17, axonemal OS=Homo sapiens GN=DNAH17 PE=1 SV=2
Length = 4485
Score = 36.6 bits (83), Expect = 0.82, Method: Compositional matrix adjust.
Identities = 53/211 (25%), Positives = 89/211 (42%), Gaps = 29/211 (13%)
Query: 174 KDAKQKLTASILRLGGDTVSDVRSHVAAAIATKAAVENMEEGGKGARAMEELKEYG---- 229
K A+ LT + D + +V H+ +AA +NM E K + +E LK YG
Sbjct: 1104 KVARMGLTKPLKEGDYDGLVEVMGHLMKVKERQAATDNMFEPLK--QTIELLKTYGEEMP 1161
Query: 230 --IHVVPSKFIKDAANGKVLELIEKMNLAPWGSDDSA--KHLAQGYSI-LNEVISVLDRN 284
IH+ + + AN K L + K+ +AP +++ + + Q + + +E R
Sbjct: 1162 EEIHLKLQELPEHWANTKKLAIQVKLTVAPLQANEVSILRRKCQQFELKQHEFRERFRRE 1221
Query: 285 AEADVKDRLILTLTNSFY------THIPHSFGLADPPLLDNKQL---------VVQKMEM 329
A D N + + S GL + P+ D KQL + + +M
Sbjct: 1222 APFSFSDPNPYKSLNKVFLLKGIMEALSKSGGLFEVPVPDYKQLKACHREVRLLKELWDM 1281
Query: 330 IDAMTQKLLDVKYEDTSKSKKVKVEPMDIEC 360
+ + + D K T+K K + VE MDI+C
Sbjct: 1282 VVVVNTSIEDWK---TTKWKDINVEQMDIDC 1309
>sp|Q5RDU4|PARP6_PONAB Poly [ADP-ribose] polymerase 6 OS=Pongo abelii GN=PARP6 PE=2 SV=1
Length = 610
Score = 36.2 bits (82), Expect = 1.00, Method: Compositional matrix adjust.
Identities = 22/66 (33%), Positives = 34/66 (51%), Gaps = 1/66 (1%)
Query: 543 GEDKRFKPFEKLGNKHLLWHGSRLTNFASIISKGLCIAP-PEAPVTGYMFGKGIYFADSV 601
++ RF+ +KL +HGS + N+ SI+ GL A + + G +GKGIY +
Sbjct: 434 AKEARFRTAKKLYGSTFAFHGSHIENWHSILRNGLVNASYTKLQLHGAAYGKGIYLSPIS 493
Query: 602 SKSANY 607
S S Y
Sbjct: 494 SISFGY 499
>sp|Q6P6P7|PARP6_MOUSE Poly [ADP-ribose] polymerase 6 OS=Mus musculus GN=Parp6 PE=2 SV=1
Length = 630
Score = 35.8 bits (81), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 23/69 (33%), Positives = 35/69 (50%), Gaps = 1/69 (1%)
Query: 540 SRHGEDKRFKPFEKLGNKHLLWHGSRLTNFASIISKGLCIAP-PEAPVTGYMFGKGIYFA 598
S ++ RF+ +KL +HGS + N+ SI+ GL A + + G +GKGIY +
Sbjct: 451 SPPAKEARFRTAKKLYGSTFAFHGSHIENWHSILRNGLVNASYTKLQLHGAAYGKGIYLS 510
Query: 599 DSVSKSANY 607
S S Y
Sbjct: 511 PISSISFGY 519
>sp|Q2NL67|PARP6_HUMAN Poly [ADP-ribose] polymerase 6 OS=Homo sapiens GN=PARP6 PE=2 SV=1
Length = 630
Score = 35.8 bits (81), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 23/69 (33%), Positives = 35/69 (50%), Gaps = 1/69 (1%)
Query: 540 SRHGEDKRFKPFEKLGNKHLLWHGSRLTNFASIISKGLCIAP-PEAPVTGYMFGKGIYFA 598
S ++ RF+ +KL +HGS + N+ SI+ GL A + + G +GKGIY +
Sbjct: 451 SPPAKEARFRTAKKLYGSTFAFHGSHIENWHSILRNGLVNASYTKLQLHGAAYGKGIYLS 510
Query: 599 DSVSKSANY 607
S S Y
Sbjct: 511 PISSISFGY 519
>sp|Q8U4C9|PSB1_PYRFU Proteasome subunit beta 1 OS=Pyrococcus furiosus (strain ATCC 43587
/ DSM 3638 / JCM 8422 / Vc1) GN=psmB1 PE=3 SV=1
Length = 196
Score = 35.8 bits (81), Expect = 1.5, Method: Composition-based stats.
Identities = 40/184 (21%), Positives = 75/184 (40%), Gaps = 11/184 (5%)
Query: 61 KSKSGTVKLQIKDGLAVDPDSGLADTTELVKYFDDRYLNAVMGKTDVAAGKNSFYKLQVL 120
K+ + TV +++KDG+ + D+ A +V+ + + + + + + S +Q+L
Sbjct: 4 KTGTTTVGIKVKDGVVLAADTQ-ASLDHMVETLNIKKIIPITDRIAITTA-GSVGDVQML 61
Query: 121 KSKIHKEKYYLFRAWGRIGTSIGGTKVQDFKDVESAFDEFDRCFEKETGNTSGKDAKQKL 180
+ E Y + WGR T+ + ++ S +R F G +
Sbjct: 62 ARYLEAEARYYYFTWGRPMTT------KAMANLLSNILNENRWFPYLVQIIIGGYVDEPT 115
Query: 181 TASILRLGGDTVSDVRSHVAAAIATKAAVENMEEGGKGARAMEELKEYGIHVVPSKFIKD 240
A++ GG D + A T A+ +EEG + +EE KE I V + +D
Sbjct: 116 IANLDPFGGLIFDD---YTATGSGTPFAIAVLEEGYREDLTIEEAKELAIRAVRAAGRRD 172
Query: 241 AANG 244
G
Sbjct: 173 VYTG 176
>sp|Q54YW4|Y8045_DICDI Probable poly [ADP-ribose] polymerase DDB_G0278045 OS=Dictyostelium
discoideum GN=DDB_G0278045 PE=4 SV=3
Length = 337
Score = 34.7 bits (78), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 19/47 (40%), Positives = 24/47 (51%), Gaps = 1/47 (2%)
Query: 635 FGKGIYFADSVSKSANYCMTNS-TNNVGLLLLCEVALGKVVKKTQAE 680
+G G+YFA + S S NY S T+ + LC V LG TQ E
Sbjct: 130 YGIGLYFALNASYSNNYSFEESPTSGCKQMFLCRVLLGNSAPPTQKE 176
>sp|Q7V355|PYRB_PROMP Aspartate carbamoyltransferase OS=Prochlorococcus marinus subsp.
pastoris (strain CCMP1986 / MED4) GN=pyrB PE=3 SV=1
Length = 338
Score = 33.9 bits (76), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 21/75 (28%), Positives = 33/75 (44%), Gaps = 5/75 (6%)
Query: 62 SKSGTVKLQIKDGLAVDPDSGLADTTELVKYFDDRYLNAVMGKTDVAAGKNSFYKLQVLK 121
SK+ T L DGL P GL D L+K+F + L K ++ K V+
Sbjct: 126 SKAKTSVLNAGDGLHSHPSQGLLDLYTLIKFFSPKLL-----KPEILNSKKILIVGDVIH 180
Query: 122 SKIHKEKYYLFRAWG 136
S++ + + A+G
Sbjct: 181 SRVARSNLWALTAFG 195
>sp|Q020J1|DCTA_SOLUE C4-dicarboxylate transport protein OS=Solibacter usitatus (strain
Ellin6076) GN=dctA PE=3 SV=1
Length = 428
Score = 33.5 bits (75), Expect = 6.6, Method: Compositional matrix adjust.
Identities = 23/71 (32%), Positives = 39/71 (54%), Gaps = 10/71 (14%)
Query: 180 LTASILRLGGDTVSDVRSHVAAAIATKAAVENMEEGGKGARAMEELKEYGIHVVPSKFIK 239
L +I+R G DVR+ AAA++ A GKG M+ E+ I+V+P+ F+
Sbjct: 93 LIVNIVRPGAGMNIDVRTLDAAAVSAYA--------GKG--KMQSTSEFLINVIPNTFVD 142
Query: 240 DAANGKVLELI 250
A G++L+++
Sbjct: 143 AFARGEILQVL 153
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.317 0.134 0.382
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 272,645,190
Number of Sequences: 539616
Number of extensions: 11495999
Number of successful extensions: 31797
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 28
Number of HSP's successfully gapped in prelim test: 28
Number of HSP's that attempted gapping in prelim test: 31497
Number of HSP's gapped (non-prelim): 200
length of query: 758
length of database: 191,569,459
effective HSP length: 125
effective length of query: 633
effective length of database: 124,117,459
effective search space: 78566351547
effective search space used: 78566351547
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 65 (29.6 bits)