Diaphorina citri psyllid: psy6818


Local Sequence Feature Prediction

Prediction and MethodResult
Residue Number Marker
Protein Sequence ?
Secondary Structure (Consensus) ?
Disordered Region (Consensus) ?
Transmembrane Helix (Consensus) ?
Signal Peptide (Consensus) ?
Coiled Coil (COILS) ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160--
SPFFDGKTPKWFHEECFWKKNRPKALLDIHNVTSLRHQDQEMIKSKILGNIEYAKSNRSTCRGCEAKIAKGEIRVSKMNYDSDQGKMIGGIPEWYHLSCFNAVRLDLEFSASGKQIPGFGSLEKKDQKIVEATLPSLSDGVSKTDAISHFLLIPLYLTLQVS
ccccccccccCCccccccccccccccccccccccccHHHHHHHHHHccccEEEcccccccccccccccccccEEEEEEccccccccccccccCECccccccccccccccccccccccccccccHHHHHHHHHHcHHcccccccccccccEEEEEcccccccc
**FFDGKTPKWFHEECFWKKNRPKALLDIHNVTSLRHQDQEMIKSKILGNIEYAKSNRSTCRGCEAKIAKGEIRVSKMNYDSDQGKMIGGIPEWYHLSCFNAVRLDLEFSASGKQIPGFGSLEKKDQKIV*********GVSKTDAISHFLLIPLYLTL***
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SPFFDGKTPKWFHEECFWKKNRPKALLDIHNVTSLRHQDQEMIKSKILGNIEYAKSNRSTCRGCEAKIAKGEIRVSKMNYDSDQGKMIGGIPEWYHLSCFNAVRLDLEFSASGKQIPGFGSLEKKDQKIVEATLPSLSDGVSKTDAISHFLLIPLYLTLQVS

Function Prediction

Annotation transfered from Closely Related SWISS-PROT Entries ?

No confident close homologs for annotation transfering were detected in SWISSPROT

Prediction of Gene Ontology Terms ?

GO Term ?Description ?Confidence Level ?Parent GO Terms ?
GO:0019538 [BP]protein metabolic processprobableGO:0071704, GO:0044238, GO:0008150, GO:0008152, GO:0043170
GO:0005719 [CC]nuclear euchromatinprobableGO:0031974, GO:0043229, GO:0043228, GO:0000785, GO:0000228, GO:0043227, GO:0043226, GO:0044446, GO:0031981, GO:0005634, GO:0044454, GO:0005694, GO:0000790, GO:0000791, GO:0043231, GO:0043232, GO:0043233, GO:0044464, GO:0005623, GO:0005622, GO:0005575, GO:0070013, GO:0044428, GO:0044424, GO:0044427, GO:0044422
GO:0044763 [BP]single-organism cellular processprobableGO:0009987, GO:0008150, GO:0044699
GO:0050896 [BP]response to stimulusprobableGO:0008150
GO:0035363 [CC]histone locus bodyprobableGO:0044446, GO:0016604, GO:0043231, GO:0031981, GO:0043233, GO:0005634, GO:0044464, GO:0005623, GO:0005622, GO:0005654, GO:0070013, GO:0043229, GO:0044428, GO:0031974, GO:0005575, GO:0044424, GO:0044451, GO:0043227, GO:0043226, GO:0044422
GO:0034645 [BP]cellular macromolecule biosynthetic processprobableGO:1901576, GO:0044260, GO:0071704, GO:0009987, GO:0044237, GO:0043170, GO:0044249, GO:0009058, GO:0009059, GO:0008150, GO:0008152
GO:0015030 [CC]Cajal bodyprobableGO:0044446, GO:0016604, GO:0043231, GO:0031981, GO:0043233, GO:0005634, GO:0044464, GO:0005623, GO:0005622, GO:0005654, GO:0070013, GO:0043229, GO:0044428, GO:0031974, GO:0005575, GO:0044424, GO:0044451, GO:0043227, GO:0043226, GO:0044422

Prediction of Enzyme Commission Number ?

No confident prediction of EC number!


Spatial Structural Prediction

Structural Models Based on Templates

Template: 4AV1, chain A
Confidence level:very confident
Coverage over the Query: 1-48
View the alignment between query and template
View the model in PyMOL