BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy6819
(135 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|1UVZ|A Chain A, Structure Of Human Thioredoxin 2
pdb|1UVZ|B Chain B, Structure Of Human Thioredoxin 2
pdb|1UVZ|C Chain C, Structure Of Human Thioredoxin 2
pdb|1UVZ|D Chain D, Structure Of Human Thioredoxin 2
pdb|1UVZ|E Chain E, Structure Of Human Thioredoxin 2
pdb|1UVZ|F Chain F, Structure Of Human Thioredoxin 2
pdb|1W4V|A Chain A, Structure Of The Oxidised Form Of Human Thioredoxin 2
pdb|1W4V|B Chain B, Structure Of The Oxidised Form Of Human Thioredoxin 2
pdb|1W4V|C Chain C, Structure Of The Oxidised Form Of Human Thioredoxin 2
pdb|1W4V|D Chain D, Structure Of The Oxidised Form Of Human Thioredoxin 2
pdb|1W4V|E Chain E, Structure Of The Oxidised Form Of Human Thioredoxin 2
pdb|1W4V|F Chain F, Structure Of The Oxidised Form Of Human Thioredoxin 2
pdb|1W89|A Chain A, Structure Of The Reduced Form Of Human Thioredoxin 2
pdb|1W89|B Chain B, Structure Of The Reduced Form Of Human Thioredoxin 2
pdb|1W89|C Chain C, Structure Of The Reduced Form Of Human Thioredoxin 2
pdb|1W89|D Chain D, Structure Of The Reduced Form Of Human Thioredoxin 2
pdb|1W89|E Chain E, Structure Of The Reduced Form Of Human Thioredoxin 2
pdb|1W89|F Chain F, Structure Of The Reduced Form Of Human Thioredoxin 2
Length = 119
Score = 94.4 bits (233), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 41/105 (39%), Positives = 71/105 (67%), Gaps = 1/105 (0%)
Query: 25 SYIIENNEQFIKHVMNNPVPVIVNFHAEWCEPCHLLTPQLKKMLGNS-DSIDLAIIDVEK 83
++ I++ F V+N+ PV+V+FHA+WC PC +L P+L+KM+ + +A +D++
Sbjct: 14 TFNIQDGPDFQDRVVNSETPVVVDFHAQWCGPCKILGPRLEKMVAKQHGKVVMAKVDIDD 73
Query: 84 NAELVHTFEVKAVPAVLAVKNGLVIDKFIGLIENEMIENMVSKLL 128
+ +L +EV AVP VLA+KNG V+DKF+G+ + + +E + KL+
Sbjct: 74 HTDLAIEYEVSAVPTVLAMKNGDVVDKFVGIKDEDQLEAFLKKLI 118
>pdb|3HHV|A Chain A, The Crystal Structure Of The Thioredoxin A2 From
Sulfolobus Solfataricus
Length = 110
Score = 60.8 bits (146), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 26/99 (26%), Positives = 58/99 (58%), Gaps = 1/99 (1%)
Query: 30 NNEQFIKHVMNNPVPVIVNFHAEWCEPCHLLTPQLKKMLGNSDSIDLAIIDVEKNAELVH 89
N++ F + + N + V+V+F AEWC PC +L P ++++ + + ++ E++ ++
Sbjct: 12 NSKNFDEFITKNKI-VVVDFWAEWCAPCLILAPVIEELANDYPQVAFGKLNTEESQDIAM 70
Query: 90 TFEVKAVPAVLAVKNGLVIDKFIGLIENEMIENMVSKLL 128
+ + ++P ++ KNG ++D+ +G + E IE + LL
Sbjct: 71 RYGIMSLPTIMFFKNGELVDQILGAVPREEIEVRLKSLL 109
>pdb|2I4A|A Chain A, Crystal Structure Of Thioredoxin From The Acidophile
Acetobacter Aceti
Length = 107
Score = 60.5 bits (145), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 26/96 (27%), Positives = 57/96 (59%), Gaps = 1/96 (1%)
Query: 30 NNEQFIKHVMNNPVPVIVNFHAEWCEPCHLLTPQLKKMLGN-SDSIDLAIIDVEKNAELV 88
++ F + V+ V+V+F AEWC PC ++ P L ++ + + +A ++++ N E
Sbjct: 8 SDSSFDQDVLKASGLVLVDFWAEWCGPCKMIGPALGEIGKEFAGKVTVAKVNIDDNPETP 67
Query: 89 HTFEVKAVPAVLAVKNGLVIDKFIGLIENEMIENMV 124
+ ++V+++P ++ V++G VIDK +G + ++ V
Sbjct: 68 NAYQVRSIPTLMLVRDGKVIDKKVGALPKSQLKAWV 103
>pdb|2VIM|A Chain A, X-Ray Structure Of Fasciola Hepatica Thioredoxin
Length = 104
Score = 59.7 bits (143), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 23/80 (28%), Positives = 47/80 (58%)
Query: 45 VIVNFHAEWCEPCHLLTPQLKKMLGNSDSIDLAIIDVEKNAELVHTFEVKAVPAVLAVKN 104
++V+F A+WC PC + P+++ + ++ A +DV++N E + V A+P + +K+
Sbjct: 22 IVVDFFAQWCGPCRNIAPKVEALAKEIPEVEFAKVDVDQNEEAAAKYSVTAMPTFVFIKD 81
Query: 105 GLVIDKFIGLIENEMIENMV 124
G +D+F G E ++ E +
Sbjct: 82 GKEVDRFSGANETKLRETIT 101
>pdb|1NSW|A Chain A, The Crystal Structure Of The K18g Mutant Of The
Thioredoxin From Alicyclobacillus Acidocaldarius
pdb|1NSW|B Chain B, The Crystal Structure Of The K18g Mutant Of The
Thioredoxin From Alicyclobacillus Acidocaldarius
pdb|1NSW|C Chain C, The Crystal Structure Of The K18g Mutant Of The
Thioredoxin From Alicyclobacillus Acidocaldarius
pdb|1NSW|D Chain D, The Crystal Structure Of The K18g Mutant Of The
Thioredoxin From Alicyclobacillus Acidocaldarius
Length = 105
Score = 59.3 bits (142), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 25/94 (26%), Positives = 52/94 (55%), Gaps = 1/94 (1%)
Query: 36 KHVMNNPVPVIVNFHAEWCEPCHLLTPQLKKML-GNSDSIDLAIIDVEKNAELVHTFEVK 94
+ + PV+V+F A WC PC ++ P L++ ++D + +A ++V++N E F +
Sbjct: 11 QQAIQGDGPVLVDFWAAWCGPCRMMAPVLEEFAEAHADKVTVAKLNVDENPETTSQFGIM 70
Query: 95 AVPAVLAVKNGLVIDKFIGLIENEMIENMVSKLL 128
++P ++ K G + + IG E +E ++ +L
Sbjct: 71 SIPTLILFKGGRPVKQLIGYQPKEQLEAQLADVL 104
>pdb|1QUW|A Chain A, Solution Structure Of The Thioredoxin From Bacillus
Acidocaldarius
Length = 105
Score = 59.3 bits (142), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 25/94 (26%), Positives = 52/94 (55%), Gaps = 1/94 (1%)
Query: 36 KHVMNNPVPVIVNFHAEWCEPCHLLTPQLKKML-GNSDSIDLAIIDVEKNAELVHTFEVK 94
+ + PV+V+F A WC PC ++ P L++ ++D + +A ++V++N E F +
Sbjct: 11 QQAIQGDKPVLVDFWAAWCGPCRMMAPVLEEFAEAHADKVTVAKLNVDENPETTSQFGIM 70
Query: 95 AVPAVLAVKNGLVIDKFIGLIENEMIENMVSKLL 128
++P ++ K G + + IG E +E ++ +L
Sbjct: 71 SIPTLILFKGGRPVKQLIGYQPKEQLEAQLADVL 104
>pdb|1RQM|A Chain A, Solution Structure Of The K18gR82E ALICYCLOBACILLUS
Acidocaldarius Thioredoxin Mutant
Length = 105
Score = 58.5 bits (140), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 25/94 (26%), Positives = 52/94 (55%), Gaps = 1/94 (1%)
Query: 36 KHVMNNPVPVIVNFHAEWCEPCHLLTPQLKKML-GNSDSIDLAIIDVEKNAELVHTFEVK 94
+ + PV+V+F A WC PC ++ P L++ ++D + +A ++V++N E F +
Sbjct: 11 QQAIQGDGPVLVDFWAAWCGPCRMMAPVLEEFAEAHADKVTVAKLNVDENPETTSQFGIM 70
Query: 95 AVPAVLAVKNGLVIDKFIGLIENEMIENMVSKLL 128
++P ++ K G + + IG E +E ++ +L
Sbjct: 71 SIPTLILFKGGEPVKQLIGYQPKEQLEAQLADVL 104
>pdb|3D21|A Chain A, Crystal Structure Of A Poplar Wild-Type Thioredoxin H,
Pttrxh4
pdb|3D21|B Chain B, Crystal Structure Of A Poplar Wild-Type Thioredoxin H,
Pttrxh4
Length = 139
Score = 58.5 bits (140), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 30/107 (28%), Positives = 55/107 (51%), Gaps = 3/107 (2%)
Query: 29 ENNEQFIKHVMNNPVPVIVNFHAEWCEPCHLLTPQLKKMLGNSDSIDLAIIDVEKNAELV 88
E +Q + + V+ NF A WC PC + P ++ N S+ +IDV++ ++
Sbjct: 33 ERWDQKLSEASRDGKIVLANFSARWCGPCKQIAPYYIELSENYPSLMFLVIDVDELSDFS 92
Query: 89 HTFEVKAVPAVLAVKNGLVIDKFIGLIENEM---IENMVSKLLPKDK 132
++E+KA P +++G +DK +G + E+ I ++ L P DK
Sbjct: 93 ASWEIKATPTFFFLRDGQQVDKLVGANKPELHKKITAILDSLPPSDK 139
>pdb|1NW2|A Chain A, The Crystal Structure Of The Mutant R82e Of Thioredoxin
From Alicyclobacillus Acidocaldarius
pdb|1NW2|B Chain B, The Crystal Structure Of The Mutant R82e Of Thioredoxin
From Alicyclobacillus Acidocaldarius
pdb|1NW2|C Chain C, The Crystal Structure Of The Mutant R82e Of Thioredoxin
From Alicyclobacillus Acidocaldarius
pdb|1NW2|D Chain D, The Crystal Structure Of The Mutant R82e Of Thioredoxin
From Alicyclobacillus Acidocaldarius
pdb|1NW2|E Chain E, The Crystal Structure Of The Mutant R82e Of Thioredoxin
From Alicyclobacillus Acidocaldarius
pdb|1NW2|F Chain F, The Crystal Structure Of The Mutant R82e Of Thioredoxin
From Alicyclobacillus Acidocaldarius
pdb|1NW2|G Chain G, The Crystal Structure Of The Mutant R82e Of Thioredoxin
From Alicyclobacillus Acidocaldarius
pdb|1NW2|H Chain H, The Crystal Structure Of The Mutant R82e Of Thioredoxin
From Alicyclobacillus Acidocaldarius
Length = 105
Score = 58.5 bits (140), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 25/94 (26%), Positives = 52/94 (55%), Gaps = 1/94 (1%)
Query: 36 KHVMNNPVPVIVNFHAEWCEPCHLLTPQLKKML-GNSDSIDLAIIDVEKNAELVHTFEVK 94
+ + PV+V+F A WC PC ++ P L++ ++D + +A ++V++N E F +
Sbjct: 11 QQAIQGDKPVLVDFWAAWCGPCRMMAPVLEEFAEAHADKVTVAKLNVDENPETTSQFGIM 70
Query: 95 AVPAVLAVKNGLVIDKFIGLIENEMIENMVSKLL 128
++P ++ K G + + IG E +E ++ +L
Sbjct: 71 SIPTLILFKGGEPVKQLIGYQPKEQLEAQLADVL 104
>pdb|2I1U|A Chain A, Mycobacterium Tuberculosis Thioredoxin C
Length = 121
Score = 58.5 bits (140), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 28/117 (23%), Positives = 60/117 (51%), Gaps = 3/117 (2%)
Query: 15 FNHFLERKFKSYIIENNEQFIKHVMNNPVPVIVNFHAEWCEPCHLLTPQLKKMLGNSDSI 74
+ + + + I + F V+++ PV+V+F A WC PC ++ P L++ + +
Sbjct: 3 WGSMTDSEKSATIKVTDASFATDVLSSNKPVLVDFWATWCGPCKMVAPVLEE-IATERAT 61
Query: 75 DLAI--IDVEKNAELVHTFEVKAVPAVLAVKNGLVIDKFIGLIENEMIENMVSKLLP 129
DL + +DV+ N E F+V ++P ++ K+G + + +G + +S ++P
Sbjct: 62 DLTVAKLDVDTNPETARNFQVVSIPTLILFKDGQPVKRIVGAKGKAALLRELSDVVP 118
>pdb|2L4Q|A Chain A, Solution Structures Of Oxidized And Reduced Thioredoxin C
From M. Tb
pdb|2L59|A Chain A, Solution Structures Of Oxidized And Reduced Thioredoxin C
From M. Tb
Length = 116
Score = 57.8 bits (138), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 30/109 (27%), Positives = 59/109 (54%), Gaps = 4/109 (3%)
Query: 24 KSYIIE-NNEQFIKHVMNNPVPVIVNFHAEWCEPCHLLTPQLKKMLGNSDSIDLAI--ID 80
KS I+ + F V+++ PV+V+F A WC PC ++ P L++ + + DL + +D
Sbjct: 6 KSATIKVTDASFATDVLSSNKPVLVDFWATWCGPCKMVAPVLEE-IATERATDLTVAKLD 64
Query: 81 VEKNAELVHTFEVKAVPAVLAVKNGLVIDKFIGLIENEMIENMVSKLLP 129
V+ N E F+V ++P ++ K+G + + +G + +S ++P
Sbjct: 65 VDTNPETARNFQVVSIPTLILFKDGQPVKRIVGAKGKAALLRELSDVVP 113
>pdb|1DBY|A Chain A, Nmr Structures Of Chloroplast Thioredoxin M Ch2 From The
Green Alga Chlamydomonas Reinhardtii
Length = 107
Score = 57.0 bits (136), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 25/100 (25%), Positives = 52/100 (52%), Gaps = 1/100 (1%)
Query: 30 NNEQFIKHVMNNPVPVIVNFHAEWCEPCHLLTPQLKKMLGN-SDSIDLAIIDVEKNAELV 88
N++ F V+ + VPV+V+F A WC PC ++ P + ++ G D + ++ +++ +
Sbjct: 7 NDDTFKNVVLESSVPVLVDFWAPWCGPCRIIAPVVDEIAGEYKDKLKCVKLNTDESPNVA 66
Query: 89 HTFEVKAVPAVLAVKNGLVIDKFIGLIENEMIENMVSKLL 128
+ ++++P ++ K G + IG + I V K L
Sbjct: 67 SEYGIRSIPTIMVFKGGKKCETIIGAVPKATIVQTVEKYL 106
>pdb|2YJ7|A Chain A, Crystal Structure Of A Hyperstable Protein From The
Precambrian Period
pdb|2YJ7|B Chain B, Crystal Structure Of A Hyperstable Protein From The
Precambrian Period
Length = 106
Score = 56.6 bits (135), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 28/105 (26%), Positives = 59/105 (56%), Gaps = 1/105 (0%)
Query: 25 SYIIENNEQFIKHVMNNPVPVIVNFHAEWCEPCHLLTPQLKKMLGNSDS-IDLAIIDVEK 83
S I +E F + V+ + PV+V+F A WC PC ++ P ++++ + + + ++V++
Sbjct: 2 SVIEVTDENFEQEVLKSDKPVLVDFWAPWCGPCRMIAPIIEELAKEYEGKVKVVKVNVDE 61
Query: 84 NAELVHTFEVKAVPAVLAVKNGLVIDKFIGLIENEMIENMVSKLL 128
N + ++++P +L KNG V+D+ +G E ++ + K L
Sbjct: 62 NPNTAAQYGIRSIPTLLLFKNGQVVDRLVGAQPKEALKERIDKHL 106
>pdb|3TCO|A Chain A, Crystallographic And Spectroscopic Characterization Of
Sulfolobus Solfataricus Trxa1 Provide Insights Into The
Determinants Of Thioredoxin Fold Stability
pdb|3TCO|B Chain B, Crystallographic And Spectroscopic Characterization Of
Sulfolobus Solfataricus Trxa1 Provide Insights Into The
Determinants Of Thioredoxin Fold Stability
pdb|3TCO|C Chain C, Crystallographic And Spectroscopic Characterization Of
Sulfolobus Solfataricus Trxa1 Provide Insights Into The
Determinants Of Thioredoxin Fold Stability
Length = 109
Score = 56.6 bits (135), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 30/98 (30%), Positives = 54/98 (55%), Gaps = 2/98 (2%)
Query: 32 EQFIKHVMNNPVPVIVNFHAEWCEPCHLLTPQLKKMLGNSDSIDL-AIIDVEKNAELVHT 90
E F + + NN + V+V+ AEWC PCHL P KK+ + ++V++N ++
Sbjct: 12 ENFDEVIRNNKL-VLVDCWAEWCAPCHLYEPIYKKVAEKYKGKAVFGRLNVDENQKIADK 70
Query: 91 FEVKAVPAVLAVKNGLVIDKFIGLIENEMIENMVSKLL 128
+ V +P L NG ++D +G ++ + +E+ V+K L
Sbjct: 71 YSVLNIPTTLIFVNGQLVDSLVGAVDEDTLESTVNKYL 108
>pdb|2E0Q|A Chain A, Crystal Structure Of K53e Thioredoxin From Sulfolobus
Tokodaii Strain7
Length = 104
Score = 55.8 bits (133), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 24/84 (28%), Positives = 48/84 (57%)
Query: 45 VIVNFHAEWCEPCHLLTPQLKKMLGNSDSIDLAIIDVEKNAELVHTFEVKAVPAVLAVKN 104
+V+F AEWC PC +L P ++++ + + ++ ++N ++ + V ++P V+ K+
Sbjct: 19 AVVDFWAEWCAPCLILAPIIEELAEDYPQVGFGKLNSDENPDIAARYGVMSLPTVIFFKD 78
Query: 105 GLVIDKFIGLIENEMIENMVSKLL 128
G +D+ IG + E IE + LL
Sbjct: 79 GEPVDEIIGAVPREEIEIRIKNLL 102
>pdb|2GZY|A Chain A, Solution Structures Of The Reduced Form Of Thioredoxin
From Bacillus Subtilis
pdb|2GZZ|A Chain A, Solution Structures Of The Oxidized Form Of Thioredoxin
From Bacillus Subtilis
Length = 104
Score = 55.8 bits (133), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 26/85 (30%), Positives = 50/85 (58%), Gaps = 1/85 (1%)
Query: 45 VIVNFHAEWCEPCHLLTPQLKKMLGN-SDSIDLAIIDVEKNAELVHTFEVKAVPAVLAVK 103
V+ +F A WC PC ++ P L+++ D + + IDV++N E + V ++P +L +K
Sbjct: 20 VLADFWAPWCGPCKMIAPVLEELDQEMGDKLKIVKIDVDENQETAGKYGVMSIPTLLVLK 79
Query: 104 NGLVIDKFIGLIENEMIENMVSKLL 128
+G V++ +G E ++ +V+K L
Sbjct: 80 DGEVVETSVGFKPKEALQELVNKHL 104
>pdb|1GL8|A Chain A, Solution Structure Of Thioredoxin M From Spinach, Oxidized
Form
Length = 104
Score = 55.5 bits (132), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 26/100 (26%), Positives = 53/100 (53%), Gaps = 1/100 (1%)
Query: 30 NNEQFIKHVMNNPVPVIVNFHAEWCEPCHLLTPQLKKMLGN-SDSIDLAIIDVEKNAELV 88
N+ + + V+ + VPV+V+F A WC PC L+ P + ++ S I + ++ ++ +
Sbjct: 5 NDSSWKEFVLESEVPVMVDFWAPWCGPCKLIAPVIDELAKEYSGKIAVYKLNTDEAPGIA 64
Query: 89 HTFEVKAVPAVLAVKNGLVIDKFIGLIENEMIENMVSKLL 128
+ ++++P VL KNG + IG + + + + K L
Sbjct: 65 TQYNIRSIPTVLFFKNGERKESIIGAVPKSTLTDSIEKYL 104
>pdb|1FB0|A Chain A, Crystal Structure Of Thioredoxin M From Spinach
Chloroplast (Reduced Form)
pdb|1FB0|B Chain B, Crystal Structure Of Thioredoxin M From Spinach
Chloroplast (Reduced Form)
pdb|1FB6|A Chain A, Crystal Structure Of Thioredoxin M From Spinach
Chloroplast (Oxidized Form)
pdb|1FB6|B Chain B, Crystal Structure Of Thioredoxin M From Spinach
Chloroplast (Oxidized Form)
Length = 105
Score = 55.5 bits (132), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 26/100 (26%), Positives = 53/100 (53%), Gaps = 1/100 (1%)
Query: 30 NNEQFIKHVMNNPVPVIVNFHAEWCEPCHLLTPQLKKMLGN-SDSIDLAIIDVEKNAELV 88
N+ + + V+ + VPV+V+F A WC PC L+ P + ++ S I + ++ ++ +
Sbjct: 6 NDSSWKEFVLESEVPVMVDFWAPWCGPCKLIAPVIDELAKEYSGKIAVYKLNTDEAPGIA 65
Query: 89 HTFEVKAVPAVLAVKNGLVIDKFIGLIENEMIENMVSKLL 128
+ ++++P VL KNG + IG + + + + K L
Sbjct: 66 TQYNIRSIPTVLFFKNGERKESIIGAVPKSTLTDSIEKYL 105
>pdb|3D22|A Chain A, Crystal Structure Of A Poplar Thioredoxin H Mutant,
Pttrxh4c61s
Length = 139
Score = 55.5 bits (132), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 29/107 (27%), Positives = 54/107 (50%), Gaps = 3/107 (2%)
Query: 29 ENNEQFIKHVMNNPVPVIVNFHAEWCEPCHLLTPQLKKMLGNSDSIDLAIIDVEKNAELV 88
E +Q + + V+ NF A WC P + P ++ N S+ +IDV++ ++
Sbjct: 33 ERWDQKLSEASRDGKIVLANFSARWCGPSRQIAPYYIELSENYPSLMFLVIDVDELSDFS 92
Query: 89 HTFEVKAVPAVLAVKNGLVIDKFIGLIENEM---IENMVSKLLPKDK 132
++E+KA P +++G +DK +G + E+ I ++ L P DK
Sbjct: 93 ASWEIKATPTFFFLRDGQQVDKLVGANKPELHKKITAILDSLPPSDK 139
>pdb|1THX|A Chain A, Thioredoxin-2
Length = 115
Score = 55.1 bits (131), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 30/97 (30%), Positives = 51/97 (52%), Gaps = 3/97 (3%)
Query: 24 KSYIIENNEQFIKHVMNNPVPVIVNFHAEWCEPCHLLTPQLKKMLGN--SDSIDLAIIDV 81
K I + +F V+ PV+V F A WC PC L++P L + N SD + + +++
Sbjct: 7 KGVITITDAEFESEVLKAEQPVLVYFWASWCGPCQLMSP-LINLAANTYSDRLKVVKLEI 65
Query: 82 EKNAELVHTFEVKAVPAVLAVKNGLVIDKFIGLIENE 118
+ N V ++V+ VPA+ VK ++D G+I +
Sbjct: 66 DPNPTTVKKYKVEGVPALRLVKGEQILDSTEGVISKD 102
>pdb|2J23|A Chain A, Cross-Reactivity And Crystal Structure Of Malassezia
Sympodialis Thioredoxin (Mala S 13), A Member Of A New
Pan- Allergen Family
pdb|2J23|B Chain B, Cross-Reactivity And Crystal Structure Of Malassezia
Sympodialis Thioredoxin (Mala S 13), A Member Of A New
Pan- Allergen Family
Length = 121
Score = 55.1 bits (131), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 25/89 (28%), Positives = 47/89 (52%), Gaps = 3/89 (3%)
Query: 27 IIENNEQFIKHVMNNPVPVIVNFHAEWCEPCHLLTPQLKKMLGN--SDSIDLAIIDVEKN 84
+I + +QF K V V+++F A WC PC ++ P +K+ D + +DV++
Sbjct: 19 VISSYDQF-KQVTGGDKVVVIDFWATWCGPCKMIGPVFEKISDTPAGDKVGFYKVDVDEQ 77
Query: 85 AELVHTFEVKAVPAVLAVKNGLVIDKFIG 113
+++ ++A+P + KNG ID +G
Sbjct: 78 SQIAQEVGIRAMPTFVFFKNGQKIDTVVG 106
>pdb|2O7K|A Chain A, S. Aureus Thioredoxin
Length = 107
Score = 54.3 bits (129), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 24/84 (28%), Positives = 48/84 (57%), Gaps = 1/84 (1%)
Query: 46 IVNFHAEWCEPCHLLTPQLKKMLGNSDS-IDLAIIDVEKNAELVHTFEVKAVPAVLAVKN 104
+V+F A WC PC ++ P L+++ + + D+ +DV++N +EV ++P ++ K+
Sbjct: 24 LVDFWATWCGPCKMIAPVLEELAADYEGKADILKLDVDENPSTAAKYEVMSIPTLIVFKD 83
Query: 105 GLVIDKFIGLIENEMIENMVSKLL 128
G +DK +G E + ++ K L
Sbjct: 84 GQPVDKVVGFQPKENLAEVLDKHL 107
>pdb|2L5L|A Chain A, Solution Structure Of Thioredoxin From Bacteroides
Vulgatus
Length = 136
Score = 54.3 bits (129), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 28/87 (32%), Positives = 48/87 (55%), Gaps = 5/87 (5%)
Query: 17 HFLERKF--KSYIIENNEQFIKHVMNNPVPVIVNFHAEWCEPCHLLTPQLKKMLGNSDS- 73
H + +F K Y E N + K+ + P IV+F+A+WC PC ++ P L ++ D
Sbjct: 13 HLTKAEFLAKVYNFEKNPEEWKYEGDKPA--IVDFYADWCGPCKMVAPILDELAKEYDGQ 70
Query: 74 IDLAIIDVEKNAELVHTFEVKAVPAVL 100
I + +D EK EL F ++++P++L
Sbjct: 71 IVIYKVDTEKEQELAGAFGIRSIPSIL 97
>pdb|3NOF|A Chain A, Mycobacterium Tuberculosis Thioredoxin C C40s Mutant
pdb|3NOF|B Chain B, Mycobacterium Tuberculosis Thioredoxin C C40s Mutant
pdb|3O6T|A Chain A, Mycobacterium Tuberculosis Thioredoxin C C40s Mutant In
Complex With Quinol Inhibitor Pmx464
pdb|3O6T|B Chain B, Mycobacterium Tuberculosis Thioredoxin C C40s Mutant In
Complex With Quinol Inhibitor Pmx464
pdb|3O6T|C Chain C, Mycobacterium Tuberculosis Thioredoxin C C40s Mutant In
Complex With Quinol Inhibitor Pmx464
pdb|3O6T|D Chain D, Mycobacterium Tuberculosis Thioredoxin C C40s Mutant In
Complex With Quinol Inhibitor Pmx464
Length = 118
Score = 53.9 bits (128), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 29/109 (26%), Positives = 58/109 (53%), Gaps = 4/109 (3%)
Query: 24 KSYIIE-NNEQFIKHVMNNPVPVIVNFHAEWCEPCHLLTPQLKKMLGNSDSIDLAI--ID 80
KS I+ + F V+++ PV+V+F A WC P ++ P L++ + + DL + +D
Sbjct: 8 KSATIKVTDASFATDVLSSNKPVLVDFWATWCGPSKMVAPVLEE-IATERATDLTVAKLD 66
Query: 81 VEKNAELVHTFEVKAVPAVLAVKNGLVIDKFIGLIENEMIENMVSKLLP 129
V+ N E F+V ++P ++ K+G + + +G + +S ++P
Sbjct: 67 VDTNPETARNFQVVSIPTLILFKDGQPVKRIVGAKGKAALLRELSDVVP 115
>pdb|2I9H|A Chain A, Nmr Solution Structure Of The Reduced Form Of Thioredoxin
1 From Yeast (Trx1)
Length = 103
Score = 53.9 bits (128), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 23/69 (33%), Positives = 39/69 (56%)
Query: 45 VIVNFHAEWCEPCHLLTPQLKKMLGNSDSIDLAIIDVEKNAELVHTFEVKAVPAVLAVKN 104
V+V+F+A WC PC ++ P ++K D +DV++ ++ EV A+P +L KN
Sbjct: 21 VVVDFYATWCGPCKMIAPMIEKFSEQYPQADFYKLDVDELGDVAQKNEVSAMPTLLLFKN 80
Query: 105 GLVIDKFIG 113
G + K +G
Sbjct: 81 GKEVAKVVG 89
>pdb|3F3Q|A Chain A, Crystal Structure Of The Oxidised Form Of Thioredoxin 1
From Saccharomyces Cerevisiae
Length = 109
Score = 53.9 bits (128), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 23/69 (33%), Positives = 39/69 (56%)
Query: 45 VIVNFHAEWCEPCHLLTPQLKKMLGNSDSIDLAIIDVEKNAELVHTFEVKAVPAVLAVKN 104
V+V+F+A WC PC ++ P ++K D +DV++ ++ EV A+P +L KN
Sbjct: 27 VVVDFYATWCGPCKMIAPMIEKFSEQYPQADFYKLDVDELGDVAQKNEVSAMPTLLLFKN 86
Query: 105 GLVIDKFIG 113
G + K +G
Sbjct: 87 GKEVAKVVG 95
>pdb|2OE0|A Chain A, Crystal Structure Of Mitochondrial Thioredoxin 3 From
Saccharomyces Cerevisiae
pdb|2OE0|B Chain B, Crystal Structure Of Mitochondrial Thioredoxin 3 From
Saccharomyces Cerevisiae
pdb|2OE1|A Chain A, Crystal Structure Of Mitochondrial Thioredoxin 3 From
Saccharomyces Cerevisiae (Reduced Form)
pdb|2OE1|B Chain B, Crystal Structure Of Mitochondrial Thioredoxin 3 From
Saccharomyces Cerevisiae (Reduced Form)
pdb|2OE3|A Chain A, Crystal Structure Of Mitochondrial Thioredoxin 3 From
Saccharomyces Cerevisiae (Oxidized Form)
pdb|2OE3|B Chain B, Crystal Structure Of Mitochondrial Thioredoxin 3 From
Saccharomyces Cerevisiae (Oxidized Form)
Length = 114
Score = 53.5 bits (127), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 21/69 (30%), Positives = 40/69 (57%)
Query: 45 VIVNFHAEWCEPCHLLTPQLKKMLGNSDSIDLAIIDVEKNAELVHTFEVKAVPAVLAVKN 104
++++F+A WC PC ++ P L K++ + DV+++ ++ EV A+P + K+
Sbjct: 33 LVIDFYATWCGPCKMMQPHLTKLIQAYPDVRFVKCDVDESPDIAKECEVTAMPTFVLGKD 92
Query: 105 GLVIDKFIG 113
G +I K IG
Sbjct: 93 GQLIGKIIG 101
>pdb|1V98|A Chain A, Crystal Structure Analysis Of Thioredoxin From Thermus
Thermophilus
pdb|1V98|B Chain B, Crystal Structure Analysis Of Thioredoxin From Thermus
Thermophilus
Length = 140
Score = 53.1 bits (126), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 24/105 (22%), Positives = 59/105 (56%), Gaps = 3/105 (2%)
Query: 26 YIIENNEQ-FIKHVMNNPVPVIVNFHAEWCEPCHLLTPQLKKMLGN-SDSIDLAIIDVEK 83
+++E +E+ F + V P+ +V+F A WC PC L++P L+++ + + + + ++V++
Sbjct: 34 WVVEADEKGFAQEVAGAPL-TLVDFFAPWCGPCRLVSPILEELARDHAGRLKVVKVNVDE 92
Query: 84 NAELVHTFEVKAVPAVLAVKNGLVIDKFIGLIENEMIENMVSKLL 128
+ L + V++VP ++ + G + ++G ++E + L
Sbjct: 93 HPGLAARYGVRSVPTLVLFRRGAPVATWVGASPRRVLEERLRPYL 137
>pdb|2XBI|A Chain A, Crystal Structure Of Schistosoma Mansoni Thioredoxin At
1.6 Angstrom
Length = 108
Score = 53.1 bits (126), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 26/84 (30%), Positives = 45/84 (53%), Gaps = 2/84 (2%)
Query: 45 VIVNFHAEWCEPCHLLTPQLKKMLGNSDSIDLAIIDVEKNAELVHTFEVKAVPAVLAVKN 104
V+V+F A WC PC + P K++ D+I +DV+K E + + A+P +A+KN
Sbjct: 27 VVVDFFATWCGPCKTIAPLFKELSEKYDAI-FVKVDVDKLEETARKYNISAMPTFIAIKN 85
Query: 105 GLVIDKFIGLIENEMIENMVSKLL 128
G + +G +E+M+ K +
Sbjct: 86 GEKVGDVVGA-SIAKVEDMIKKFI 108
>pdb|2XBQ|A Chain A, Crystal Structure Of Reduced Schistosoma Mansoni
Thioredoxin Pre-Protein At 1.7 Angstrom
pdb|2XBQ|B Chain B, Crystal Structure Of Reduced Schistosoma Mansoni
Thioredoxin Pre-Protein At 1.7 Angstrom
pdb|2XC2|A Chain A, Crystal Structure Of Oxidized Schistosoma Mansoni
Thioredoxin Pre-Protein At 1.6 Angstrom
Length = 117
Score = 53.1 bits (126), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 26/84 (30%), Positives = 45/84 (53%), Gaps = 2/84 (2%)
Query: 45 VIVNFHAEWCEPCHLLTPQLKKMLGNSDSIDLAIIDVEKNAELVHTFEVKAVPAVLAVKN 104
V+V+F A WC PC + P K++ D+I +DV+K E + + A+P +A+KN
Sbjct: 36 VVVDFFATWCGPCKTIAPLFKELSEKYDAI-FVKVDVDKLEETARKYNISAMPTFIAIKN 94
Query: 105 GLVIDKFIGLIENEMIENMVSKLL 128
G + +G +E+M+ K +
Sbjct: 95 GEKVGDVVGA-SIAKVEDMIKKFI 117
>pdb|3P2A|A Chain A, Crystal Structure Of Thioredoxin 2 From Yersinia Pestis
pdb|3P2A|B Chain B, Crystal Structure Of Thioredoxin 2 From Yersinia Pestis
pdb|3P2A|C Chain C, Crystal Structure Of Thioredoxin 2 From Yersinia Pestis
pdb|3P2A|D Chain D, Crystal Structure Of Thioredoxin 2 From Yersinia Pestis
Length = 148
Score = 53.1 bits (126), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 22/110 (20%), Positives = 48/110 (43%), Gaps = 1/110 (0%)
Query: 23 FKSYIIENNEQFIKHVMNNPVPVIVNFHAEWCEPCHLLTPQLKKMLG-NSDSIDLAIIDV 81
F +I + + ++ + +P +++F A WC PC P + + + ++
Sbjct: 36 FDGEVINATAETLDKLLQDDLPXVIDFWAPWCGPCRSFAPIFAETAAERAGKVRFVKVNT 95
Query: 82 EKNAELVHTFEVKAVPAVLAVKNGLVIDKFIGLIENEMIENMVSKLLPKD 131
E L F ++++P + +NG ID G + +N + + L +D
Sbjct: 96 EAEPALSTRFRIRSIPTIXLYRNGKXIDXLNGAVPKAPFDNWLDEQLSRD 145
>pdb|3ZZX|A Chain A, Crystallographic Structure Of Thioredoxin From Litopenaeus
Vannamei
pdb|3ZZX|B Chain B, Crystallographic Structure Of Thioredoxin From Litopenaeus
Vannamei
Length = 105
Score = 53.1 bits (126), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 24/98 (24%), Positives = 55/98 (56%), Gaps = 3/98 (3%)
Query: 26 YIIENNEQFIKHV--MNNPVPVIVNFHAEWCEPCHLLTPQLKKMLGNSDSIDLAIIDVEK 83
Y +++ E F K + N + V+++F+A WC PC ++ P+L+++ + + +DV++
Sbjct: 3 YQVKDQEDFTKQLNEAGNKL-VVIDFYATWCGPCKMIAPKLEELSQSMSDVVFLKVDVDE 61
Query: 84 NAELVHTFEVKAVPAVLAVKNGLVIDKFIGLIENEMIE 121
++ ++ +P L +KNG +D G ++++E
Sbjct: 62 CEDIAQDNQIACMPTFLFMKNGQKLDSLSGANYDKLLE 99
>pdb|2IPA|A Chain A, Solution Structure Of Trx-Arsc Complex
Length = 104
Score = 52.0 bits (123), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 25/85 (29%), Positives = 49/85 (57%), Gaps = 1/85 (1%)
Query: 45 VIVNFHAEWCEPCHLLTPQLKKMLGN-SDSIDLAIIDVEKNAELVHTFEVKAVPAVLAVK 103
V+ +F A WC P ++ P L+++ D + + IDV++N E + V ++P +L +K
Sbjct: 20 VLADFWAPWCGPSKMIAPVLEELDQEMGDKLKIVKIDVDENQETAGKYGVMSIPTLLVLK 79
Query: 104 NGLVIDKFIGLIENEMIENMVSKLL 128
+G V++ +G E ++ +V+K L
Sbjct: 80 DGEVVETSVGFKPKEALQELVNKHL 104
>pdb|2VOC|A Chain A, Thioredoxin A Active Site Mutants Form Mixed Disulfide
Dimers That Resemble Enzyme-substrate Reaction
Intermediate
pdb|2VOC|B Chain B, Thioredoxin A Active Site Mutants Form Mixed Disulfide
Dimers That Resemble Enzyme-substrate Reaction
Intermediate
Length = 112
Score = 52.0 bits (123), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 24/83 (28%), Positives = 48/83 (57%), Gaps = 1/83 (1%)
Query: 45 VIVNFHAEWCEPCHLLTPQLKKMLGN-SDSIDLAIIDVEKNAELVHTFEVKAVPAVLAVK 103
V+ +F A WC P ++ P L+++ D + + IDV++N E + V ++P +L +K
Sbjct: 20 VLADFWAPWCGPSKMIAPVLEELDQEMGDKLKIVKIDVDENQETAGKYGVMSIPTLLVLK 79
Query: 104 NGLVIDKFIGLIENEMIENMVSK 126
+G V++ +G E ++ +V+K
Sbjct: 80 DGEVVETSVGFKPKEALQELVNK 102
>pdb|2PUK|C Chain C, Crystal Srtucture Of The Binary Complex Between
Ferredoxin: Thioredoxin Reductase And Thioredoxin M
pdb|2PUK|G Chain G, Crystal Srtucture Of The Binary Complex Between
Ferredoxin: Thioredoxin Reductase And Thioredoxin M
Length = 106
Score = 51.6 bits (122), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 25/100 (25%), Positives = 52/100 (52%), Gaps = 1/100 (1%)
Query: 30 NNEQFIKHVMNNPVPVIVNFHAEWCEPCHLLTPQLKKMLGN-SDSIDLAIIDVEKNAELV 88
N+ + + V+ + VPV+V+F A WC P L+ P + ++ S I + ++ ++ +
Sbjct: 6 NDSSWKEFVLESEVPVMVDFWAPWCGPSKLIAPVIDELAKEYSGKIAVYKLNTDEAPGIA 65
Query: 89 HTFEVKAVPAVLAVKNGLVIDKFIGLIENEMIENMVSKLL 128
+ ++++P VL KNG + IG + + + + K L
Sbjct: 66 TQYNIRSIPTVLFFKNGERKESIIGAVPKSTLTDSIEKYL 105
>pdb|2CVK|A Chain A, Crystal Structure Of Thermus Thermophilus Thioredoxin
Length = 110
Score = 51.2 bits (121), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 26/101 (25%), Positives = 55/101 (54%), Gaps = 2/101 (1%)
Query: 30 NNEQFIKHVMNNPVPVIVNFHAEWCEPCHLLTPQLKKMLGNSDS-IDLAIIDVEKNAELV 88
++ F + + +P+ V+V+F AEWC PC + P L+++ + + +A +DV++N +
Sbjct: 8 TDQNFDETLGQHPL-VLVDFWAEWCAPCRXIAPILEEIAKEYEGKLLVAKLDVDENPKTA 66
Query: 89 HTFEVKAVPAVLAVKNGLVIDKFIGLIENEMIENMVSKLLP 129
+ V ++P V+ K+G ++ +G + + K LP
Sbjct: 67 XRYRVXSIPTVILFKDGQPVEVLVGAQPKRNYQAKIEKHLP 107
>pdb|2YZU|A Chain A, Crystal Structure Of Oxidized Thioredoxin From Thermus
Thermophilus Hb8
Length = 109
Score = 51.2 bits (121), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 26/101 (25%), Positives = 55/101 (54%), Gaps = 2/101 (1%)
Query: 30 NNEQFIKHVMNNPVPVIVNFHAEWCEPCHLLTPQLKKMLGNSDS-IDLAIIDVEKNAELV 88
++ F + + +P+ V+V+F AEWC PC + P L+++ + + +A +DV++N +
Sbjct: 7 TDQNFDETLGQHPL-VLVDFWAEWCAPCRXIAPILEEIAKEYEGKLLVAKLDVDENPKTA 65
Query: 89 HTFEVKAVPAVLAVKNGLVIDKFIGLIENEMIENMVSKLLP 129
+ V ++P V+ K+G ++ +G + + K LP
Sbjct: 66 XRYRVXSIPTVILFKDGQPVEVLVGAQPKRNYQAKIEKHLP 106
>pdb|2O87|A Chain A, S. Aureus Thioredoxin P31s Mutant
Length = 106
Score = 50.8 bits (120), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 23/84 (27%), Positives = 47/84 (55%), Gaps = 1/84 (1%)
Query: 46 IVNFHAEWCEPCHLLTPQLKKMLGNSDS-IDLAIIDVEKNAELVHTFEVKAVPAVLAVKN 104
+V+F A WC C ++ P L+++ + + D+ +DV++N +EV ++P ++ K+
Sbjct: 23 LVDFWATWCGSCKMIAPVLEELAADYEGKADILKLDVDENPSTAAKYEVMSIPTLIVFKD 82
Query: 105 GLVIDKFIGLIENEMIENMVSKLL 128
G +DK +G E + ++ K L
Sbjct: 83 GQPVDKVVGFQPKENLAEVLDKHL 106
>pdb|2O85|A Chain A, S. Aureus Thioredoxin P31t Mutant
Length = 107
Score = 50.8 bits (120), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 23/84 (27%), Positives = 47/84 (55%), Gaps = 1/84 (1%)
Query: 46 IVNFHAEWCEPCHLLTPQLKKMLGNSDS-IDLAIIDVEKNAELVHTFEVKAVPAVLAVKN 104
+V+F A WC C ++ P L+++ + + D+ +DV++N +EV ++P ++ K+
Sbjct: 24 LVDFWATWCGTCKMIAPVLEELAADYEGKADILKLDVDENPSTAAKYEVMSIPTLIVFKD 83
Query: 105 GLVIDKFIGLIENEMIENMVSKLL 128
G +DK +G E + ++ K L
Sbjct: 84 GQPVDKVVGFQPKENLAEVLDKHL 107
>pdb|1T00|A Chain A, The Structure Of Thioredoxin From S. Coelicolor
Length = 112
Score = 50.4 bits (119), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 22/85 (25%), Positives = 44/85 (51%), Gaps = 1/85 (1%)
Query: 30 NNEQFIKHVMNNPVPVIVNFHAEWCEPCHLLTPQLKKMLGN-SDSIDLAIIDVEKNAELV 88
++ F + V+ N PV+V+F A WC PC + P L+ + D I++ +++++N
Sbjct: 11 TDDSFEQDVLKNDKPVLVDFWAAWCGPCRQIAPSLEAIAAEYGDKIEIVKLNIDENPGTA 70
Query: 89 HTFEVKAVPAVLAVKNGLVIDKFIG 113
+ V ++P + + G V +G
Sbjct: 71 AKYGVMSIPTLNVYQGGEVAKTIVG 95
>pdb|3F3R|A Chain A, Crystal Structure Of Yeast Thioredoxin1-Glutathione Mixed
Disulfide Complex
pdb|3F3R|B Chain B, Crystal Structure Of Yeast Thioredoxin1-Glutathione Mixed
Disulfide Complex
Length = 109
Score = 50.1 bits (118), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 22/69 (31%), Positives = 38/69 (55%)
Query: 45 VIVNFHAEWCEPCHLLTPQLKKMLGNSDSIDLAIIDVEKNAELVHTFEVKAVPAVLAVKN 104
V+V+F+A WC P ++ P ++K D +DV++ ++ EV A+P +L KN
Sbjct: 27 VVVDFYATWCGPSKMIAPMIEKFSEQYPQADFYKLDVDELGDVAQKNEVSAMPTLLLFKN 86
Query: 105 GLVIDKFIG 113
G + K +G
Sbjct: 87 GKEVAKVVG 95
>pdb|3HXS|A Chain A, Crystal Structure Of Bacteroides Fragilis Trxp
pdb|3HXS|B Chain B, Crystal Structure Of Bacteroides Fragilis Trxp
Length = 141
Score = 49.7 bits (117), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 26/101 (25%), Positives = 55/101 (54%), Gaps = 3/101 (2%)
Query: 29 ENNEQFIKHVMNNPVPVIVNFHAEWCEPCHLLTPQLKKMLGN-SDSIDLAIIDVEKNAEL 87
EN+ + K++ + P IV+F+A+WC PC ++ P L+++ + I + ++V+K EL
Sbjct: 40 ENHSKEWKYLGDKPA--IVDFYADWCGPCKMVAPILEELSKEYAGKIYIYKVNVDKEPEL 97
Query: 88 VHTFEVKAVPAVLAVKNGLVIDKFIGLIENEMIENMVSKLL 128
F ++++P + V +G + E ++ + K+L
Sbjct: 98 ARDFGIQSIPTIWFVPMKGEPQVNMGALSKEQLKGYIDKVL 138
>pdb|3HYP|A Chain A, Crystal Structure Of Bacteroides Fragilis Trxp_s105g
Mutant
pdb|3HYP|B Chain B, Crystal Structure Of Bacteroides Fragilis Trxp_s105g
Mutant
Length = 141
Score = 49.7 bits (117), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 26/101 (25%), Positives = 54/101 (53%), Gaps = 3/101 (2%)
Query: 29 ENNEQFIKHVMNNPVPVIVNFHAEWCEPCHLLTPQLKKMLGN-SDSIDLAIIDVEKNAEL 87
EN+ + K++ + P IV+F+A+WC PC ++ P L+++ + I + ++V+K EL
Sbjct: 40 ENHSKEWKYLGDKPA--IVDFYADWCGPCKMVAPILEELSKEYAGKIYIYKVNVDKEPEL 97
Query: 88 VHTFEVKAVPAVLAVKNGLVIDKFIGLIENEMIENMVSKLL 128
F ++ +P + V +G + E ++ + K+L
Sbjct: 98 ARDFGIQGIPTIWFVPMKGEPQVNMGALSKEQLKGYIDKVL 138
>pdb|2H76|A Chain A, Crystal Structure Of Thioredoxin Mutant D10e In Hexagonal
(P61) Space Group
pdb|2H76|B Chain B, Crystal Structure Of Thioredoxin Mutant D10e In Hexagonal
(P61) Space Group
Length = 108
Score = 49.3 bits (116), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 22/97 (22%), Positives = 48/97 (49%), Gaps = 1/97 (1%)
Query: 30 NNEQFIKHVMNNPVPVIVNFHAEWCEPCHLLTPQLKKMLGN-SDSIDLAIIDVEKNAELV 88
+E F V+ ++V+F AEWC PC ++ P L ++ + +A +++++N
Sbjct: 8 TDESFDTDVLKADGAILVDFWAEWCGPCKMIAPILDEIADEYQGKLTVAKLNIDQNPGTA 67
Query: 89 HTFEVKAVPAVLAVKNGLVIDKFIGLIENEMIENMVS 125
+ ++ +P +L KNG V +G + ++ +
Sbjct: 68 PKYGIRGIPTLLLFKNGEVAATKVGALSKGQLKEFLD 104
>pdb|2VLT|A Chain A, Crystal Structure Of Barley Thioredoxin H Isoform 2 In The
Oxidized State
pdb|2VLT|B Chain B, Crystal Structure Of Barley Thioredoxin H Isoform 2 In The
Oxidized State
pdb|2VLU|A Chain A, Crystal Structure Of Barley Thioredoxin H Isoform 2 In
Partially Radiation-Reduced State
pdb|2VLU|B Chain B, Crystal Structure Of Barley Thioredoxin H Isoform 2 In
Partially Radiation-Reduced State
pdb|2VLV|A Chain A, Crystal Structure Of Barley Thioredoxin H Isoform 2 In
Partially Radiation-Reduced State
pdb|2VLV|B Chain B, Crystal Structure Of Barley Thioredoxin H Isoform 2 In
Partially Radiation-Reduced State
Length = 122
Score = 49.3 bits (116), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 22/75 (29%), Positives = 40/75 (53%)
Query: 45 VIVNFHAEWCEPCHLLTPQLKKMLGNSDSIDLAIIDVEKNAELVHTFEVKAVPAVLAVKN 104
V+++F A WC PC ++ P + + +DV++ + F V+A+P L +K
Sbjct: 37 VVIDFTASWCGPCRIMAPVFADLAKKFPNAVFLKVDVDELKPIAEQFSVEAMPTFLFMKE 96
Query: 105 GLVIDKFIGLIENEM 119
G V D+ +G I+ E+
Sbjct: 97 GDVKDRVVGAIKEEL 111
>pdb|2H6Y|A Chain A, Crystal Structure Of Thioredoxin Mutant E48d In Hexagonal
(P61) Space Group
pdb|2H6Y|B Chain B, Crystal Structure Of Thioredoxin Mutant E48d In Hexagonal
(P61) Space Group
Length = 108
Score = 49.3 bits (116), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 21/97 (21%), Positives = 49/97 (50%), Gaps = 1/97 (1%)
Query: 30 NNEQFIKHVMNNPVPVIVNFHAEWCEPCHLLTPQLKKMLGN-SDSIDLAIIDVEKNAELV 88
++ F V+ ++V+F AEWC PC ++ P L ++ + + +A +++++N
Sbjct: 8 TDDSFDTDVLKADGAILVDFWAEWCGPCKMIAPILDEIADDYQGKLTVAKLNIDQNPGTA 67
Query: 89 HTFEVKAVPAVLAVKNGLVIDKFIGLIENEMIENMVS 125
+ ++ +P +L KNG V +G + ++ +
Sbjct: 68 PKYGIRGIPTLLLFKNGEVAATKVGALSKGQLKEFLD 104
>pdb|3GNJ|A Chain A, The Crystal Structure Of A Thioredoxin-Related Protein
From Desulfitobacterium Hafniense Dcb
pdb|3GNJ|B Chain B, The Crystal Structure Of A Thioredoxin-Related Protein
From Desulfitobacterium Hafniense Dcb
pdb|3GNJ|C Chain C, The Crystal Structure Of A Thioredoxin-Related Protein
From Desulfitobacterium Hafniense Dcb
pdb|3GNJ|D Chain D, The Crystal Structure Of A Thioredoxin-Related Protein
From Desulfitobacterium Hafniense Dcb
Length = 111
Score = 48.9 bits (115), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 26/96 (27%), Positives = 48/96 (50%), Gaps = 1/96 (1%)
Query: 34 FIKHVMNNPVPVIVNFHAEWCEPCHLLTPQLKKM-LGNSDSIDLAIIDVEKNAELVHTFE 92
F + + + +V F + C C +TP L+++ L +S +DVE+ L F
Sbjct: 14 FEQLIYDEGKACLVXFSRKNCHVCQKVTPVLEELRLNYEESFGFYYVDVEEEKTLFQRFS 73
Query: 93 VKAVPAVLAVKNGLVIDKFIGLIENEMIENMVSKLL 128
+K VP +L K+G K G +E++ +E ++ +L
Sbjct: 74 LKGVPQILYFKDGEYKGKXAGDVEDDEVEQXIADVL 109
>pdb|1WMJ|A Chain A, Solution Structure Of Thioredoxin Type H From Oryza Sativa
Length = 130
Score = 48.9 bits (115), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 22/80 (27%), Positives = 41/80 (51%)
Query: 45 VIVNFHAEWCEPCHLLTPQLKKMLGNSDSIDLAIIDVEKNAELVHTFEVKAVPAVLAVKN 104
VI++F A WC PC + P + +DV++ E+ + V+A+P L +K+
Sbjct: 39 VIIDFTASWCGPCRFIAPVFAEYAKKFPGAVFLKVDVDELKEVAEKYNVEAMPTFLFIKD 98
Query: 105 GLVIDKFIGLIENEMIENMV 124
G DK +G ++++ +V
Sbjct: 99 GAEADKVVGARKDDLQNTIV 118
>pdb|3DIE|A Chain A, Domain Swapping Of Staphylococcus Aureus Thioredoxin W28a
Mutant
pdb|3DIE|B Chain B, Domain Swapping Of Staphylococcus Aureus Thioredoxin W28a
Mutant
Length = 106
Score = 48.5 bits (114), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 23/84 (27%), Positives = 47/84 (55%), Gaps = 1/84 (1%)
Query: 46 IVNFHAEWCEPCHLLTPQLKKMLGNSDS-IDLAIIDVEKNAELVHTFEVKAVPAVLAVKN 104
+V+F A C PC ++ P L+++ + + D+ +DV++N +EV ++P ++ K+
Sbjct: 23 LVDFWATACGPCKMIAPVLEELAADYEGKADILKLDVDENPSTAAKYEVMSIPTLIVFKD 82
Query: 105 GLVIDKFIGLIENEMIENMVSKLL 128
G +DK +G E + ++ K L
Sbjct: 83 GQPVDKVVGFQPKENLAEVLDKHL 106
>pdb|2H73|A Chain A, Crystal Structure Of Thioredoxin Mutant D43e In Hexagonal
(P61) Space Group
pdb|2H73|B Chain B, Crystal Structure Of Thioredoxin Mutant D43e In Hexagonal
(P61) Space Group
Length = 108
Score = 48.5 bits (114), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 21/97 (21%), Positives = 49/97 (50%), Gaps = 1/97 (1%)
Query: 30 NNEQFIKHVMNNPVPVIVNFHAEWCEPCHLLTPQLKKMLGN-SDSIDLAIIDVEKNAELV 88
++ F V+ ++V+F AEWC PC ++ P L+++ + +A +++++N
Sbjct: 8 TDDSFDTDVLKADGAILVDFWAEWCGPCKMIAPILEEIADEYQGKLTVAKLNIDQNPGTA 67
Query: 89 HTFEVKAVPAVLAVKNGLVIDKFIGLIENEMIENMVS 125
+ ++ +P +L KNG V +G + ++ +
Sbjct: 68 PKYGIRGIPTLLLFKNGEVAATKVGALSKGQLKEFLD 104
>pdb|3VFI|A Chain A, Crystal Structure Of A Metagenomic Thioredoxin
Length = 104
Score = 48.5 bits (114), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 20/87 (22%), Positives = 43/87 (49%), Gaps = 1/87 (1%)
Query: 30 NNEQFIKHVMNNPVPVIVNFHAEWCEPCHLLTPQLKKMLGNSDS-IDLAIIDVEKNAELV 88
++ F V +P P+I+ F WC+PC + P ++M + I A +D E + +
Sbjct: 5 SDSDFQLEVRQHPDPIIIMFTGSWCQPCKKMKPTFEEMASQMEGDIRFAYMDAEDAEKTM 64
Query: 89 HTFEVKAVPAVLAVKNGLVIDKFIGLI 115
++ +P++ +G++ + F G +
Sbjct: 65 AELNIRTLPSLALFVDGMIREVFSGTM 91
>pdb|2TIR|A Chain A, Crystal Structure Analysis Of A Mutant Escherichia Coli
Thioredoxin In Which Lysine 36 Is Replaced By Glutamic
Acid
Length = 108
Score = 48.1 bits (113), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 21/97 (21%), Positives = 48/97 (49%), Gaps = 1/97 (1%)
Query: 30 NNEQFIKHVMNNPVPVIVNFHAEWCEPCHLLTPQLKKMLGN-SDSIDLAIIDVEKNAELV 88
++ F V+ ++V+F AEWC PC ++ P L ++ + +A +++++N
Sbjct: 8 TDDSFDTDVLKADGAILVDFWAEWCGPCEMIAPILDEIADEYQGKLTVAKLNIDQNPGTA 67
Query: 89 HTFEVKAVPAVLAVKNGLVIDKFIGLIENEMIENMVS 125
+ ++ +P +L KNG V +G + ++ +
Sbjct: 68 PKYGIRGIPTLLLFKNGEVAATKVGALSKGQLKEFLD 104
>pdb|3DXB|A Chain A, Structure Of The Uhm Domain Of Puf60 Fused To Thioredoxin
pdb|3DXB|B Chain B, Structure Of The Uhm Domain Of Puf60 Fused To Thioredoxin
pdb|3DXB|C Chain C, Structure Of The Uhm Domain Of Puf60 Fused To Thioredoxin
pdb|3DXB|D Chain D, Structure Of The Uhm Domain Of Puf60 Fused To Thioredoxin
pdb|3DXB|E Chain E, Structure Of The Uhm Domain Of Puf60 Fused To Thioredoxin
pdb|3DXB|F Chain F, Structure Of The Uhm Domain Of Puf60 Fused To Thioredoxin
pdb|3DXB|G Chain G, Structure Of The Uhm Domain Of Puf60 Fused To Thioredoxin
pdb|3DXB|H Chain H, Structure Of The Uhm Domain Of Puf60 Fused To Thioredoxin
Length = 222
Score = 48.1 bits (113), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 21/87 (24%), Positives = 45/87 (51%), Gaps = 1/87 (1%)
Query: 30 NNEQFIKHVMNNPVPVIVNFHAEWCEPCHLLTPQLKKMLGN-SDSIDLAIIDVEKNAELV 88
++ F V+ ++V+F AEWC PC ++ P L ++ + +A +++++N
Sbjct: 18 TDDSFDTDVLKADGAILVDFWAEWCGPCKMIAPILDEIADEYQGKLTVAKLNIDQNPGTA 77
Query: 89 HTFEVKAVPAVLAVKNGLVIDKFIGLI 115
+ ++ +P +L KNG V +G +
Sbjct: 78 PKYGIRGIPTLLLFKNGEVAATKVGAL 104
>pdb|2FCH|A Chain A, Crystal Structure Of Thioredoxin Mutant G74s
pdb|2FCH|B Chain B, Crystal Structure Of Thioredoxin Mutant G74s
pdb|2FCH|C Chain C, Crystal Structure Of Thioredoxin Mutant G74s
pdb|2FCH|D Chain D, Crystal Structure Of Thioredoxin Mutant G74s
pdb|2FCH|E Chain E, Crystal Structure Of Thioredoxin Mutant G74s
pdb|2FCH|F Chain F, Crystal Structure Of Thioredoxin Mutant G74s
pdb|2FCH|G Chain G, Crystal Structure Of Thioredoxin Mutant G74s
Length = 108
Score = 48.1 bits (113), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 21/96 (21%), Positives = 49/96 (51%), Gaps = 1/96 (1%)
Query: 30 NNEQFIKHVMNNPVPVIVNFHAEWCEPCHLLTPQLKKMLGN-SDSIDLAIIDVEKNAELV 88
++ F V+ ++V+F AEWC PC ++ P L ++ + +A +++++N
Sbjct: 8 TDDSFDTDVLKADGAILVDFWAEWCGPCKMIAPILDEIADEYQGKLTVAKLNIDQNPGTA 67
Query: 89 HTFEVKAVPAVLAVKNGLVIDKFIGLIENEMIENMV 124
+ ++++P +L KNG V +G + ++ +
Sbjct: 68 PKYGIRSIPTLLLFKNGEVAATKVGALSKGQLKEFL 103
>pdb|2EIO|A Chain A, Design Of Disulfide-Linked Thioredoxin Dimers And
Multimers Through Analysis Of Crystal Contacts
pdb|2EIO|B Chain B, Design Of Disulfide-Linked Thioredoxin Dimers And
Multimers Through Analysis Of Crystal Contacts
pdb|2EIO|C Chain C, Design Of Disulfide-Linked Thioredoxin Dimers And
Multimers Through Analysis Of Crystal Contacts
pdb|2EIO|D Chain D, Design Of Disulfide-Linked Thioredoxin Dimers And
Multimers Through Analysis Of Crystal Contacts
Length = 108
Score = 48.1 bits (113), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 21/93 (22%), Positives = 47/93 (50%), Gaps = 1/93 (1%)
Query: 30 NNEQFIKHVMNNPVPVIVNFHAEWCEPCHLLTPQLKKMLGN-SDSIDLAIIDVEKNAELV 88
++ F V+ ++V+F AEWC PC ++ P L ++ + +A +++++N
Sbjct: 8 TDDSFDTDVLKADGAILVDFWAEWCGPCKMIAPILDEIADEYQGKLTVAKLNIDQNPGTA 67
Query: 89 HTFEVKAVPAVLAVKNGLVIDKFIGLIENEMIE 121
+ ++ +P +L KNG V +G + ++
Sbjct: 68 PKYGIRGIPTLLLFKNGEVAATKVGALSKGQLK 100
>pdb|2H74|A Chain A, Crystal Structure Of Thioredoxin Mutant D2e In Hexagonal
(P61) Space Group
pdb|2H74|B Chain B, Crystal Structure Of Thioredoxin Mutant D2e In Hexagonal
(P61) Space Group
Length = 108
Score = 48.1 bits (113), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 21/97 (21%), Positives = 48/97 (49%), Gaps = 1/97 (1%)
Query: 30 NNEQFIKHVMNNPVPVIVNFHAEWCEPCHLLTPQLKKMLGN-SDSIDLAIIDVEKNAELV 88
++ F V+ ++V+F AEWC PC ++ P L ++ + +A +++++N
Sbjct: 8 TDDSFDTDVLKADGAILVDFWAEWCGPCKMIAPILDEIADEYQGKLTVAKLNIDQNPGTA 67
Query: 89 HTFEVKAVPAVLAVKNGLVIDKFIGLIENEMIENMVS 125
+ ++ +P +L KNG V +G + ++ +
Sbjct: 68 PKYGIRGIPTLLLFKNGEVAATKVGALSKGQLKEFLD 104
>pdb|2TRX|A Chain A, Crystal Structure Of Thioredoxin From Escherichia Coli At
1.68 Angstroms Resolution
pdb|2TRX|B Chain B, Crystal Structure Of Thioredoxin From Escherichia Coli At
1.68 Angstroms Resolution
pdb|1T7P|B Chain B, T7 Dna Polymerase Complexed To Dna PrimerTEMPLATE,A
Nucleoside Triphosphate, And Its Processivity Factor
Thioredoxin
pdb|1SKR|B Chain B, T7 Dna Polymerase Complexed To Dna Primer/template And
Ddatp
pdb|1SKS|B Chain B, Binary 3' Complex Of T7 Dna Polymerase With A Dna
PrimerTEMPLATE CONTAINING A CIS-Syn Thymine Dimer On The
Template
pdb|1SKW|B Chain B, Binary 3' Complex Of T7 Dna Polymerase With A Dna
PrimerTEMPLATE CONTAINING A DISORDERED CIS-Syn Thymine
Dimer On The Template
pdb|1SL0|B Chain B, Ternary 3' Complex Of T7 Dna Polymerase With A Dna
PrimerTEMPLATE CONTAINING A DISORDERED CIS-Syn Thymine
Dimer On The Template And An Incoming Nucleotide
pdb|1SL0|D Chain D, Ternary 3' Complex Of T7 Dna Polymerase With A Dna
PrimerTEMPLATE CONTAINING A DISORDERED CIS-Syn Thymine
Dimer On The Template And An Incoming Nucleotide
pdb|1SL1|B Chain B, Binary 5' Complex Of T7 Dna Polymerase With A Dna
Primer/template Containing A Cis-syn Thymine Dimer On
The Template
pdb|1SL2|B Chain B, Ternary 5' Complex Of T7 Dna Polymerase With A Dna
PrimerTEMPLATE CONTAINING A CIS-Syn Thymine Dimer On The
Template And An Incoming Nucleotide
pdb|1TK0|B Chain B, T7 Dna Polymerase Ternary Complex With 8 Oxo Guanosine And
Ddctp At The Insertion Site
pdb|1TK5|B Chain B, T7 Dna Polymerase Binary Complex With 8 Oxo Guanosine In
The Templating Strand
pdb|1TK8|B Chain B, T7 Dna Polymerase Ternary Complex With 8 Oxo Guanosine And
Damp At The Elongation Site
pdb|1TKD|B Chain B, T7 Dna Polymerase Ternary Complex With 8 Oxo Guanosine And
Dcmp At The Elongation Site
pdb|1T8E|B Chain B, T7 Dna Polymerase Ternary Complex With Dctp At The
Insertion Site.
pdb|1X9M|B Chain B, T7 Dna Polymerase In Complex With An N-2-
Acetylaminofluorene-adducted Dna
pdb|1X9S|B Chain B, T7 Dna Polymerase In Complex With A PrimerTEMPLATE DNA
Containing A Disordered N-2 Aminofluorene On The
Template, Crystallized With Dideoxy-Ctp As The Incoming
Nucleotide.
pdb|1X9W|B Chain B, T7 Dna Polymerase In Complex With A Primer/template Dna
Containing A Disordered N-2 Aminofluorene On The
Template, Crystallized With Dideoxy-atp As The Incoming
Nucleotide.
pdb|2BTO|T Chain T, Structure Of Btuba From Prosthecobacter Dejongeii
pdb|1ZYQ|B Chain B, T7 Dna Polymerase In Complex With 8og And Incoming Ddatp
pdb|2AJQ|B Chain B, Structure Of Replicative Dna Polymerase Provides Insigts
Into The Mechanisms For Processivity, Frameshifting And
Editing
pdb|2AJQ|I Chain I, Structure Of Replicative Dna Polymerase Provides Insigts
Into The Mechanisms For Processivity, Frameshifting And
Editing
pdb|2H6X|A Chain A, Crystal Structure Of Thioredoxin Wild Type In Hexagonal
(P61) Space Group
pdb|2H6X|B Chain B, Crystal Structure Of Thioredoxin Wild Type In Hexagonal
(P61) Space Group
Length = 108
Score = 48.1 bits (113), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 21/97 (21%), Positives = 48/97 (49%), Gaps = 1/97 (1%)
Query: 30 NNEQFIKHVMNNPVPVIVNFHAEWCEPCHLLTPQLKKMLGN-SDSIDLAIIDVEKNAELV 88
++ F V+ ++V+F AEWC PC ++ P L ++ + +A +++++N
Sbjct: 8 TDDSFDTDVLKADGAILVDFWAEWCGPCKMIAPILDEIADEYQGKLTVAKLNIDQNPGTA 67
Query: 89 HTFEVKAVPAVLAVKNGLVIDKFIGLIENEMIENMVS 125
+ ++ +P +L KNG V +G + ++ +
Sbjct: 68 PKYGIRGIPTLLLFKNGEVAATKVGALSKGQLKEFLD 104
>pdb|1XOB|A Chain A, Thioredoxin (Reduced Dithio Form), Nmr, 20 Structures
pdb|1XOA|A Chain A, Thioredoxin (Oxidized Disulfide Form), Nmr, 20 Structures
Length = 108
Score = 48.1 bits (113), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 21/97 (21%), Positives = 48/97 (49%), Gaps = 1/97 (1%)
Query: 30 NNEQFIKHVMNNPVPVIVNFHAEWCEPCHLLTPQLKKMLGN-SDSIDLAIIDVEKNAELV 88
++ F V+ ++V+F AEWC PC ++ P L ++ + +A +++++N
Sbjct: 8 TDDSFDTDVLKADGAILVDFWAEWCGPCKMIAPILDEIADEYQGKLTVAKLNIDQNPGTA 67
Query: 89 HTFEVKAVPAVLAVKNGLVIDKFIGLIENEMIENMVS 125
+ ++ +P +L KNG V +G + ++ +
Sbjct: 68 PKYGIRGIPTLLLFKNGEVAATKVGALSKGQLKEFLD 104
>pdb|2H72|A Chain A, Crystal Structure Of Thioredoxin Mutant E85d In Hexagonal
(P61) Space Group
pdb|2H72|B Chain B, Crystal Structure Of Thioredoxin Mutant E85d In Hexagonal
(P61) Space Group
Length = 108
Score = 48.1 bits (113), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 21/97 (21%), Positives = 48/97 (49%), Gaps = 1/97 (1%)
Query: 30 NNEQFIKHVMNNPVPVIVNFHAEWCEPCHLLTPQLKKMLGN-SDSIDLAIIDVEKNAELV 88
++ F V+ ++V+F AEWC PC ++ P L ++ + +A +++++N
Sbjct: 8 TDDSFDTDVLKADGAILVDFWAEWCGPCKMIAPILDEIADEYQGKLTVAKLNIDQNPGTA 67
Query: 89 HTFEVKAVPAVLAVKNGLVIDKFIGLIENEMIENMVS 125
+ ++ +P +L KNG V +G + ++ +
Sbjct: 68 PKYGIRGIPTLLLFKNGDVAATKVGALSKGQLKEFLD 104
>pdb|1ZZY|A Chain A, Crystal Structure Of Thioredoxin Mutant L7v
pdb|1ZZY|B Chain B, Crystal Structure Of Thioredoxin Mutant L7v
Length = 108
Score = 48.1 bits (113), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 21/97 (21%), Positives = 48/97 (49%), Gaps = 1/97 (1%)
Query: 30 NNEQFIKHVMNNPVPVIVNFHAEWCEPCHLLTPQLKKMLGN-SDSIDLAIIDVEKNAELV 88
++ F V+ ++V+F AEWC PC ++ P L ++ + +A +++++N
Sbjct: 8 TDDSFDTDVLKADGAILVDFWAEWCGPCKMIAPILDEIADEYQGKLTVAKLNIDQNPGTA 67
Query: 89 HTFEVKAVPAVLAVKNGLVIDKFIGLIENEMIENMVS 125
+ ++ +P +L KNG V +G + ++ +
Sbjct: 68 PKYGIRGIPTLLLFKNGEVAATKVGALSKGQLKEFLD 104
>pdb|2EIR|A Chain A, Design Of Disulfide-Linked Thioredoxin Dimers And
Multimers Through Analysis Of Crystal Contacts
pdb|2EIR|B Chain B, Design Of Disulfide-Linked Thioredoxin Dimers And
Multimers Through Analysis Of Crystal Contacts
pdb|2EIR|C Chain C, Design Of Disulfide-Linked Thioredoxin Dimers And
Multimers Through Analysis Of Crystal Contacts
pdb|2EIR|D Chain D, Design Of Disulfide-Linked Thioredoxin Dimers And
Multimers Through Analysis Of Crystal Contacts
Length = 108
Score = 48.1 bits (113), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 21/93 (22%), Positives = 47/93 (50%), Gaps = 1/93 (1%)
Query: 30 NNEQFIKHVMNNPVPVIVNFHAEWCEPCHLLTPQLKKMLGN-SDSIDLAIIDVEKNAELV 88
++ F V+ ++V+F AEWC PC ++ P L ++ + +A +++++N
Sbjct: 8 TDDSFDTDVLKADGAILVDFWAEWCGPCKMIAPILDEIADEYQGKLTVAKLNIDQNPGTA 67
Query: 89 HTFEVKAVPAVLAVKNGLVIDKFIGLIENEMIE 121
+ ++ +P +L KNG V +G + ++
Sbjct: 68 PKYGIRGIPTLLLFKNGEVAATKVGALSKGQLK 100
>pdb|2H75|A Chain A, Crystal Structure Of Thioredoxin Mutant D13e In Hexagonal
(P61) Space Group
pdb|2H75|B Chain B, Crystal Structure Of Thioredoxin Mutant D13e In Hexagonal
(P61) Space Group
Length = 108
Score = 48.1 bits (113), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 21/97 (21%), Positives = 48/97 (49%), Gaps = 1/97 (1%)
Query: 30 NNEQFIKHVMNNPVPVIVNFHAEWCEPCHLLTPQLKKMLGN-SDSIDLAIIDVEKNAELV 88
++ F V+ ++V+F AEWC PC ++ P L ++ + +A +++++N
Sbjct: 8 TDDSFETDVLKADGAILVDFWAEWCGPCKMIAPILDEIADEYQGKLTVAKLNIDQNPGTA 67
Query: 89 HTFEVKAVPAVLAVKNGLVIDKFIGLIENEMIENMVS 125
+ ++ +P +L KNG V +G + ++ +
Sbjct: 68 PKYGIRGIPTLLLFKNGEVAATKVGALSKGQLKEFLD 104
>pdb|2H6Z|A Chain A, Crystal Structure Of Thioredoxin Mutant E44d In Hexagonal
(P61) Space Group
pdb|2H6Z|B Chain B, Crystal Structure Of Thioredoxin Mutant E44d In Hexagonal
(P61) Space Group
Length = 108
Score = 47.8 bits (112), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 21/97 (21%), Positives = 47/97 (48%), Gaps = 1/97 (1%)
Query: 30 NNEQFIKHVMNNPVPVIVNFHAEWCEPCHLLTPQLKKMLGN-SDSIDLAIIDVEKNAELV 88
++ F V+ ++V+F AEWC PC ++ P L + + +A +++++N
Sbjct: 8 TDDSFDTDVLKADGAILVDFWAEWCGPCKMIAPILDDIADEYQGKLTVAKLNIDQNPGTA 67
Query: 89 HTFEVKAVPAVLAVKNGLVIDKFIGLIENEMIENMVS 125
+ ++ +P +L KNG V +G + ++ +
Sbjct: 68 PKYGIRGIPTLLLFKNGEVAATKVGALSKGQLKEFLD 104
>pdb|1XW9|A Chain A, Drospohila Thioredoxin, Oxidized, P21
pdb|1XW9|B Chain B, Drospohila Thioredoxin, Oxidized, P21
pdb|1XW9|C Chain C, Drospohila Thioredoxin, Oxidized, P21
pdb|1XW9|D Chain D, Drospohila Thioredoxin, Oxidized, P21
pdb|1XWB|A Chain A, Drospohila Thioredoxin, Oxidized, P42212
pdb|1XWB|B Chain B, Drospohila Thioredoxin, Oxidized, P42212
pdb|1XWB|C Chain C, Drospohila Thioredoxin, Oxidized, P42212
pdb|1XWB|D Chain D, Drospohila Thioredoxin, Oxidized, P42212
pdb|1XWC|A Chain A, Drosophila Thioredoxin, Reduced, P6522
Length = 106
Score = 47.8 bits (112), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 18/70 (25%), Positives = 46/70 (65%), Gaps = 1/70 (1%)
Query: 45 VIVNFHAEWCEPCHLLTPQLKKMLGN-SDSIDLAIIDVEKNAELVHTFEVKAVPAVLAVK 103
V+++F A WC PC +++P+L ++ +D++ + +DV++ ++ + + ++P + +K
Sbjct: 23 VVLDFFATWCGPCKMISPKLVELSTQFADNVVVLKVDVDECEDIAMEYNISSMPTFVFLK 82
Query: 104 NGLVIDKFIG 113
NG+ +++F G
Sbjct: 83 NGVKVEEFAG 92
>pdb|2H71|A Chain A, Crystal Structure Of Thioredoxin Mutant D47e In Hexagonal
(P61) Space Group
pdb|2H71|B Chain B, Crystal Structure Of Thioredoxin Mutant D47e In Hexagonal
(P61) Space Group
Length = 108
Score = 47.8 bits (112), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 21/97 (21%), Positives = 48/97 (49%), Gaps = 1/97 (1%)
Query: 30 NNEQFIKHVMNNPVPVIVNFHAEWCEPCHLLTPQLKKMLGN-SDSIDLAIIDVEKNAELV 88
++ F V+ ++V+F AEWC PC ++ P L ++ + +A +++++N
Sbjct: 8 TDDSFDTDVLKADGAILVDFWAEWCGPCKMIAPILDEIAEEYQGKLTVAKLNIDQNPGTA 67
Query: 89 HTFEVKAVPAVLAVKNGLVIDKFIGLIENEMIENMVS 125
+ ++ +P +L KNG V +G + ++ +
Sbjct: 68 PKYGIRGIPTLLLFKNGEVAATKVGALSKGQLKEFLD 104
>pdb|2H70|A Chain A, Crystal Structure Of Thioredoxin Mutant D9e In Hexagonal
(P61) Space Group
pdb|2H70|B Chain B, Crystal Structure Of Thioredoxin Mutant D9e In Hexagonal
(P61) Space Group
Length = 108
Score = 47.4 bits (111), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 21/95 (22%), Positives = 47/95 (49%), Gaps = 1/95 (1%)
Query: 32 EQFIKHVMNNPVPVIVNFHAEWCEPCHLLTPQLKKMLGN-SDSIDLAIIDVEKNAELVHT 90
+ F V+ ++V+F AEWC PC ++ P L ++ + +A +++++N
Sbjct: 10 DSFDTDVLKADGAILVDFWAEWCGPCKMIAPILDEIADEYQGKLTVAKLNIDQNPGTAPK 69
Query: 91 FEVKAVPAVLAVKNGLVIDKFIGLIENEMIENMVS 125
+ ++ +P +L KNG V +G + ++ +
Sbjct: 70 YGIRGIPTLLLFKNGEVAATKVGALSKGQLKEFLD 104
>pdb|1XWA|A Chain A, Drospohila Thioredoxin, Oxidized, P41212
pdb|1XWA|B Chain B, Drospohila Thioredoxin, Oxidized, P41212
pdb|1XWA|C Chain C, Drospohila Thioredoxin, Oxidized, P41212
pdb|1XWA|D Chain D, Drospohila Thioredoxin, Oxidized, P41212
Length = 111
Score = 47.4 bits (111), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 18/70 (25%), Positives = 46/70 (65%), Gaps = 1/70 (1%)
Query: 45 VIVNFHAEWCEPCHLLTPQLKKMLGN-SDSIDLAIIDVEKNAELVHTFEVKAVPAVLAVK 103
V+++F A WC PC +++P+L ++ +D++ + +DV++ ++ + + ++P + +K
Sbjct: 28 VVLDFFATWCGPCKMISPKLVELSTQFADNVVVLKVDVDECEDIAMEYNISSMPTFVFLK 87
Query: 104 NGLVIDKFIG 113
NG+ +++F G
Sbjct: 88 NGVKVEEFAG 97
>pdb|2F51|A Chain A, Structure Of Trichomonas Vaginalis Thioredoxin
pdb|2F51|B Chain B, Structure Of Trichomonas Vaginalis Thioredoxin
Length = 118
Score = 47.4 bits (111), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 24/88 (27%), Positives = 41/88 (46%), Gaps = 4/88 (4%)
Query: 30 NNEQFIKHVMNNPVPVIVNFHAEWCEPCHLLTPQLKKMLGNSDSIDLAIIDVEKNAELVH 89
+E + + P V+V+F A WC PC L L + + + +DV+KN
Sbjct: 11 THEALLNRIKEAPGLVLVDFFATWCGPCQRLGQILPSIAEANKDVTFIKVDVDKNGNAAD 70
Query: 90 TFEVKAVPAVLAVKNGL----VIDKFIG 113
+ V ++PA+ VK +D+F+G
Sbjct: 71 AYGVSSIPALFFVKKEGNEIKTLDQFVG 98
>pdb|3DYR|A Chain A, Crystal Structure Of E. Coli Thioredoxin Mutant I76t In
Its Oxidized Form
pdb|3DYR|B Chain B, Crystal Structure Of E. Coli Thioredoxin Mutant I76t In
Its Oxidized Form
Length = 111
Score = 47.4 bits (111), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 21/96 (21%), Positives = 47/96 (48%), Gaps = 1/96 (1%)
Query: 30 NNEQFIKHVMNNPVPVIVNFHAEWCEPCHLLTPQLKKMLGN-SDSIDLAIIDVEKNAELV 88
++ F V+ ++V+F AEWC PC ++ P L ++ + +A +++++N
Sbjct: 9 TDDSFDTDVLKADGAILVDFWAEWCGPCKMIAPILDEIADEYQGKLTVAKLNIDQNPGTA 68
Query: 89 HTFEVKAVPAVLAVKNGLVIDKFIGLIENEMIENMV 124
+ ++ P +L KNG V +G + ++ +
Sbjct: 69 PKYGIRGTPTLLLFKNGEVAATKVGALSKGQLKEFL 104
>pdb|3UL3|B Chain B, Structural Insights Into Thioredoxin-2: A Component Of
Malaria Parasite Protein Secretion Machinery
pdb|3UL3|A Chain A, Structural Insights Into Thioredoxin-2: A Component Of
Malaria Parasite Protein Secretion Machinery
Length = 128
Score = 47.4 bits (111), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 32/113 (28%), Positives = 59/113 (52%), Gaps = 10/113 (8%)
Query: 15 FNHFLERKFKS--YIIENNEQFIKHV-MNNPVPVIVNFHAEWCEPCHLLTPQLKKMLGN- 70
F+ + R FK + +N I V M N V +++ F A+WC+ C + + ++ K+
Sbjct: 13 FDKYYLRMFKKVPRLQQNGSNIINGVNMKNTV-IVLYFFAKWCQACTMQSTEMDKLQKYY 71
Query: 71 SDSIDLAIIDVEKNAELVHTFEVKAVPAVLAVKNGLVI---DKFIGLIENEMI 120
I L +D++KN L F VK++P ++ +KN ++ D F+ N++I
Sbjct: 72 GKRIYLLKVDLDKNESLARKFSVKSLPTIILLKNKTMLARKDHFVS--SNDLI 122
>pdb|2EIQ|A Chain A, Design Of Disulfide-linked Thioredoxin Dimers And
Multimers Through Analysis Of Crystal Contacts
pdb|2EIQ|B Chain B, Design Of Disulfide-linked Thioredoxin Dimers And
Multimers Through Analysis Of Crystal Contacts
Length = 108
Score = 47.4 bits (111), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 21/97 (21%), Positives = 48/97 (49%), Gaps = 1/97 (1%)
Query: 30 NNEQFIKHVMNNPVPVIVNFHAEWCEPCHLLTPQLKKMLGN-SDSIDLAIIDVEKNAELV 88
++ F V+ ++V+F AEWC PC ++ P L ++ + +A +++++N
Sbjct: 8 TDDSFDTDVLKADGAILVDFWAEWCGPCKMIAPILDEIADEYQGKLTVAKLNIDQNPGTA 67
Query: 89 HTFEVKAVPAVLAVKNGLVIDKFIGLIENEMIENMVS 125
+ ++ +P +L KNG V +G + ++ +
Sbjct: 68 PKYGIRGIPTLLLFKNGEVAACKVGALSKGQLKEFLD 104
>pdb|2O89|A Chain A, S. Aureus Thioredoxin P31tC32S MUTANT
Length = 107
Score = 47.0 bits (110), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 22/84 (26%), Positives = 46/84 (54%), Gaps = 1/84 (1%)
Query: 46 IVNFHAEWCEPCHLLTPQLKKMLGNSDS-IDLAIIDVEKNAELVHTFEVKAVPAVLAVKN 104
+V+F A WC ++ P L+++ + + D+ +DV++N +EV ++P ++ K+
Sbjct: 24 LVDFWATWCGTSKMIAPVLEELAADYEGKADILKLDVDENPSTAAKYEVMSIPTLIVFKD 83
Query: 105 GLVIDKFIGLIENEMIENMVSKLL 128
G +DK +G E + ++ K L
Sbjct: 84 GQPVDKVVGFQPKENLAEVLDKHL 107
>pdb|1TI3|A Chain A, Solution Structure Of The Thioredoxin H1 From Poplar, A
Cppc Active Site Variant
Length = 113
Score = 47.0 bits (110), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 20/82 (24%), Positives = 47/82 (57%), Gaps = 1/82 (1%)
Query: 45 VIVNFHAEWCEPCHLLTPQLKKMLGNSDSIDLAIIDVEKNAELVHTFEVKAVPAVLAVKN 104
++V+F A WC PC ++ P ++ ++ +DV++ + + V+A+P + +K+
Sbjct: 29 IVVDFTASWCPPCKMIAPIFAELAKKFPNVTFLKVDVDELKAVAEEWNVEAMPTFIFLKD 88
Query: 105 GLVIDKFIGLIENEMIENMVSK 126
G ++DK +G + + + +V+K
Sbjct: 89 GKLVDKTVG-ADKDGLPTLVAK 109
>pdb|2VM1|A Chain A, Crystal Structure Of Barley Thioredoxin H Isoform 1
Crystallized Using Ammonium Sulfate As Precipitant
pdb|2VM1|B Chain B, Crystal Structure Of Barley Thioredoxin H Isoform 1
Crystallized Using Ammonium Sulfate As Precipitant
pdb|2VM1|C Chain C, Crystal Structure Of Barley Thioredoxin H Isoform 1
Crystallized Using Ammonium Sulfate As Precipitant
pdb|2VM1|D Chain D, Crystal Structure Of Barley Thioredoxin H Isoform 1
Crystallized Using Ammonium Sulfate As Precipitant
pdb|2VM2|A Chain A, Crystal Structure Of Barley Thioredoxin H Isoform 1
Crystallized Using Peg As Precipitant
pdb|2VM2|B Chain B, Crystal Structure Of Barley Thioredoxin H Isoform 1
Crystallized Using Peg As Precipitant
pdb|2VM2|C Chain C, Crystal Structure Of Barley Thioredoxin H Isoform 1
Crystallized Using Peg As Precipitant
pdb|2VM2|D Chain D, Crystal Structure Of Barley Thioredoxin H Isoform 1
Crystallized Using Peg As Precipitant
Length = 118
Score = 46.6 bits (109), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 23/99 (23%), Positives = 49/99 (49%), Gaps = 3/99 (3%)
Query: 30 NNEQFIKHVMNNPVP---VIVNFHAEWCEPCHLLTPQLKKMLGNSDSIDLAIIDVEKNAE 86
++F H+ N VI++F A WC PC ++ P + +DV++ +
Sbjct: 13 TKQEFDTHMANGKDTGKLVIIDFTASWCGPCRVIAPVFAEYAKKFPGAIFLKVDVDELKD 72
Query: 87 LVHTFEVKAVPAVLAVKNGLVIDKFIGLIENEMIENMVS 125
+ + V+A+P L +K+G +D +G ++++ +V+
Sbjct: 73 VAEAYNVEAMPTFLFIKDGEKVDSVVGGRKDDIHTKIVA 111
>pdb|1XFL|A Chain A, Solution Structure Of Thioredoxin H1 From Arabidopsis
Thaliana
Length = 124
Score = 46.6 bits (109), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 20/102 (19%), Positives = 49/102 (48%)
Query: 26 YIIENNEQFIKHVMNNPVPVIVNFHAEWCEPCHLLTPQLKKMLGNSDSIDLAIIDVEKNA 85
+ +E + ++ + V+V+F A WC PC + P + ++ +D ++
Sbjct: 22 HTVETWNEQLQKANESKTLVVVDFTASWCGPCRFIAPFFADLAKKLPNVLFLKVDTDELK 81
Query: 86 ELVHTFEVKAVPAVLAVKNGLVIDKFIGLIENEMIENMVSKL 127
+ + ++A+P + +K G ++DK +G ++E+ + L
Sbjct: 82 SVASDWAIQAMPTFMFLKEGKILDKVVGAKKDELQSTIAKHL 123
>pdb|3QDN|A Chain A, Putative Thioredoxin Protein From Salmonella Typhimurium
pdb|3QDN|B Chain B, Putative Thioredoxin Protein From Salmonella Typhimurium
Length = 287
Score = 46.6 bits (109), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 29/109 (26%), Positives = 52/109 (47%), Gaps = 3/109 (2%)
Query: 27 IIENNEQFIKHVMNNP--VPVIVNFHAEWCEPCHLLTPQLKKMLGN-SDSIDLAIIDVEK 83
I+ NE ++ + PV+ F +E + C LTP L+ + LA +D +
Sbjct: 9 IVNINESNLQQTLEQSXTTPVLFYFWSERSQHCLQLTPVLESLAAQYHGQFILAKLDCDA 68
Query: 84 NAELVHTFEVKAVPAVLAVKNGLVIDKFIGLIENEMIENMVSKLLPKDK 132
+ F ++A+P V +NG +D F G E I ++ K+LP+++
Sbjct: 69 EQXIAAQFGLRAIPTVYLFQNGQPVDGFQGPQPEEAIRALLDKVLPREE 117
>pdb|2FA4|A Chain A, Crystal Structure Of Oxidized Form From Saccharomyces
Cerevisiae
pdb|2FA4|B Chain B, Crystal Structure Of Oxidized Form From Saccharomyces
Cerevisiae
Length = 111
Score = 46.6 bits (109), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 18/69 (26%), Positives = 37/69 (53%)
Query: 45 VIVNFHAEWCEPCHLLTPQLKKMLGNSDSIDLAIIDVEKNAELVHTFEVKAVPAVLAVKN 104
V+V+F A WC PC ++ P ++K +DV++ +++ EV ++P ++ K
Sbjct: 29 VVVDFFATWCGPCKMIAPMIEKFAEQYSDAAFYKLDVDEVSDVAQKAEVSSMPTLIFYKG 88
Query: 105 GLVIDKFIG 113
G + + +G
Sbjct: 89 GKEVTRVVG 97
>pdb|2HSY|A Chain A, Solution Structure Of Thioredoxin 2 From Saccharomyces
Cerevisiae
Length = 104
Score = 46.6 bits (109), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 18/69 (26%), Positives = 37/69 (53%)
Query: 45 VIVNFHAEWCEPCHLLTPQLKKMLGNSDSIDLAIIDVEKNAELVHTFEVKAVPAVLAVKN 104
V+V+F A WC PC ++ P ++K +DV++ +++ EV ++P ++ K
Sbjct: 22 VVVDFFATWCGPCKMIAPMIEKFAEQYSDAAFYKLDVDEVSDVAQKAEVSSMPTLIFYKG 81
Query: 105 GLVIDKFIG 113
G + + +G
Sbjct: 82 GKEVTRVVG 90
>pdb|1KEB|A Chain A, Crystal Structure Of Double Mutant M37l,P40s E.Coli
Thioredoxin
pdb|1KEB|B Chain B, Crystal Structure Of Double Mutant M37l,P40s E.Coli
Thioredoxin
Length = 108
Score = 45.8 bits (107), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 21/96 (21%), Positives = 47/96 (48%), Gaps = 1/96 (1%)
Query: 30 NNEQFIKHVMNNPVPVIVNFHAEWCEPCHLLTPQLKKMLGN-SDSIDLAIIDVEKNAELV 88
++ F V+ ++V+F AEWC PC L+ L ++ + +A +++++N
Sbjct: 8 TDDSFDTDVLKADGAILVDFWAEWCGPCKLIASILDEIADEYQGKLTVAKLNIDQNPGTA 67
Query: 89 HTFEVKAVPAVLAVKNGLVIDKFIGLIENEMIENMV 124
+ ++ +P +L KNG V +G + ++ +
Sbjct: 68 PKYGIRGIPTLLLFKNGEVAATKVGALSKGQLKEFL 103
>pdb|2IWT|A Chain A, Thioredoxin H2 (Hvtrxh2) In A Mixed Disulfide Complex With
The Target Protein Basi
Length = 125
Score = 45.4 bits (106), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 21/75 (28%), Positives = 39/75 (52%)
Query: 45 VIVNFHAEWCEPCHLLTPQLKKMLGNSDSIDLAIIDVEKNAELVHTFEVKAVPAVLAVKN 104
V+++F A WC P ++ P + + +DV++ + F V+A+P L +K
Sbjct: 40 VVIDFTASWCGPSRIMAPVFADLAKKFPNAVFLKVDVDELKPIAEQFSVEAMPTFLFMKE 99
Query: 105 GLVIDKFIGLIENEM 119
G V D+ +G I+ E+
Sbjct: 100 GDVKDRVVGAIKEEL 114
>pdb|1SYR|A Chain A, Initial Structural Analysis Of Plasmodium Falciparum
Thioredoxin
pdb|1SYR|B Chain B, Initial Structural Analysis Of Plasmodium Falciparum
Thioredoxin
pdb|1SYR|C Chain C, Initial Structural Analysis Of Plasmodium Falciparum
Thioredoxin
pdb|1SYR|D Chain D, Initial Structural Analysis Of Plasmodium Falciparum
Thioredoxin
pdb|1SYR|E Chain E, Initial Structural Analysis Of Plasmodium Falciparum
Thioredoxin
pdb|1SYR|F Chain F, Initial Structural Analysis Of Plasmodium Falciparum
Thioredoxin
pdb|1SYR|G Chain G, Initial Structural Analysis Of Plasmodium Falciparum
Thioredoxin
pdb|1SYR|H Chain H, Initial Structural Analysis Of Plasmodium Falciparum
Thioredoxin
pdb|1SYR|I Chain I, Initial Structural Analysis Of Plasmodium Falciparum
Thioredoxin
pdb|1SYR|J Chain J, Initial Structural Analysis Of Plasmodium Falciparum
Thioredoxin
pdb|1SYR|K Chain K, Initial Structural Analysis Of Plasmodium Falciparum
Thioredoxin
pdb|1SYR|L Chain L, Initial Structural Analysis Of Plasmodium Falciparum
Thioredoxin
Length = 112
Score = 45.1 bits (105), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 23/87 (26%), Positives = 43/87 (49%), Gaps = 1/87 (1%)
Query: 27 IIENNEQFIKHVMNNPVPVIVNFHAEWCEPCHLLTPQLKKMLGNSDSIDLAIIDVEKNAE 86
I+ + +F + N + VIV+F AEWC PC + P ++ + +DV++ +E
Sbjct: 12 IVTSQAEFDSIISQNEL-VIVDFFAEWCGPCKRIAPFYEECSKTYTKMVFIKVDVDEVSE 70
Query: 87 LVHTFEVKAVPAVLAVKNGLVIDKFIG 113
+ + ++P KNG +D +G
Sbjct: 71 VTEKENITSMPTFKVYKNGSSVDTLLG 97
>pdb|3QOU|A Chain A, Crystal Structure Of E. Coli Ybbn
Length = 287
Score = 45.1 bits (105), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 29/109 (26%), Positives = 54/109 (49%), Gaps = 3/109 (2%)
Query: 27 IIENNEQFIKHVMNNPV--PVIVNFHAEWCEPCHLLTPQLKKMLGNSDS-IDLAIIDVEK 83
I+ NE ++ V+ + PV+ F +E + C LTP L+ + + LA +D +
Sbjct: 9 IVNINESNLQQVLEQSMTTPVLFYFWSERSQHCLQLTPILESLAAQYNGQFILAKLDCDA 68
Query: 84 NAELVHTFEVKAVPAVLAVKNGLVIDKFIGLIENEMIENMVSKLLPKDK 132
+ F ++A+P V +NG +D F G E I ++ +LP+++
Sbjct: 69 EQMIAAQFGLRAIPTVYLFQNGQPVDGFQGPQPEEAIRALLDXVLPREE 117
>pdb|1R26|A Chain A, Crystal Structure Of Thioredoxin From Trypanosoma Brucei
Brucei
Length = 125
Score = 45.1 bits (105), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 21/82 (25%), Positives = 43/82 (52%), Gaps = 1/82 (1%)
Query: 32 EQFIKHVMNNPVPVIVNFHAEWCEPCHLLTPQLKKMLGNSDSIDLAIIDVEKNAELVHTF 91
EQF +++M+ + + F A WC PC + ++K+ ++ A +D + N+E+V
Sbjct: 28 EQF-RNIMSEDILTVAWFTAVWCGPCKTIERPMEKIAYEFPTVKFAKVDADNNSEIVSKC 86
Query: 92 EVKAVPAVLAVKNGLVIDKFIG 113
V +P + ++G ++ IG
Sbjct: 87 RVLQLPTFIIARSGKMLGHVIG 108
>pdb|3D6I|A Chain A, Structure Of The Thioredoxin-Like Domain Of Yeast
Glutaredoxin 3
pdb|3D6I|B Chain B, Structure Of The Thioredoxin-Like Domain Of Yeast
Glutaredoxin 3
Length = 112
Score = 44.7 bits (104), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 21/72 (29%), Positives = 38/72 (52%), Gaps = 4/72 (5%)
Query: 45 VIVNFHAEWCEPCHLLTPQLKKMLGNSDS---IDLAIIDVEKNAELVHTFEVKAVPAVLA 101
+++ FH W EPC L Q+ + + N S + ID ++N+E+ FE+ AVP +
Sbjct: 24 IVLYFHTSWAEPCKALK-QVFEAISNEPSNSNVSFLSIDADENSEISELFEISAVPYFII 82
Query: 102 VKNGLVIDKFIG 113
+ G ++ + G
Sbjct: 83 IHKGTILKELSG 94
>pdb|2O8V|B Chain B, Paps Reductase In A Covalent Complex With Thioredoxin C35a
Length = 128
Score = 44.3 bits (103), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 20/93 (21%), Positives = 46/93 (49%), Gaps = 1/93 (1%)
Query: 30 NNEQFIKHVMNNPVPVIVNFHAEWCEPCHLLTPQLKKMLGN-SDSIDLAIIDVEKNAELV 88
++ F V+ ++V+F AEWC P ++ P L ++ + +A +++++N
Sbjct: 28 TDDSFDTDVLKADGAILVDFWAEWCGPAKMIAPILDEIADEYQGKLTVAKLNIDQNPGTA 87
Query: 89 HTFEVKAVPAVLAVKNGLVIDKFIGLIENEMIE 121
+ ++ +P +L KNG V +G + ++
Sbjct: 88 PKYGIRGIPTLLLFKNGEVAATKVGALSKGQLK 120
>pdb|1F6M|C Chain C, Crystal Structure Of A Complex Between Thioredoxin
Reductase, Thioredoxin, And The Nadp+ Analog, Aadp+
pdb|1F6M|D Chain D, Crystal Structure Of A Complex Between Thioredoxin
Reductase, Thioredoxin, And The Nadp+ Analog, Aadp+
pdb|1F6M|G Chain G, Crystal Structure Of A Complex Between Thioredoxin
Reductase, Thioredoxin, And The Nadp+ Analog, Aadp+
pdb|1F6M|H Chain H, Crystal Structure Of A Complex Between Thioredoxin
Reductase, Thioredoxin, And The Nadp+ Analog, Aadp+
Length = 108
Score = 44.3 bits (103), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 20/96 (20%), Positives = 47/96 (48%), Gaps = 1/96 (1%)
Query: 30 NNEQFIKHVMNNPVPVIVNFHAEWCEPCHLLTPQLKKMLGN-SDSIDLAIIDVEKNAELV 88
++ F V+ ++V+F AEWC P ++ P L ++ + +A +++++N
Sbjct: 8 TDDSFDTDVLKADGAILVDFWAEWCGPSKMIAPILDEIADEYQGKLTVAKLNIDQNPGTA 67
Query: 89 HTFEVKAVPAVLAVKNGLVIDKFIGLIENEMIENMV 124
+ ++ +P +L KNG V +G + ++ +
Sbjct: 68 PKYGIRGIPTLLLFKNGEVAATKVGALSKGQLKEFL 103
>pdb|1TRS|A Chain A, The High-Resolution Three-Dimensional Solution Structures
Of The Oxidized And Reduced States Of Human Thioredoxin
pdb|1TRU|A Chain A, The High-Resolution Three-Dimensional Solution Structures
Of The Oxidized And Reduced States Of Human Thioredoxin
pdb|1TRV|A Chain A, The High-resolution Three-dimensional Solution Structures
Of The Oxidized And Reduced States Of Human Thioredoxin
pdb|1TRW|A Chain A, The High-Resolution Three-Dimensional Solution Structures
Of The Oxidized And Reduced States Of Human Thioredoxin
Length = 105
Score = 44.3 bits (103), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 23/84 (27%), Positives = 41/84 (48%), Gaps = 1/84 (1%)
Query: 45 VIVNFHAEWCEPCHLLTPQLKKMLGNSDSIDLAIIDVEKNAELVHTFEVKAVPAVLAVKN 104
V+V+F A WC PC ++ P + ++ +DV+ ++ EVKA P K
Sbjct: 23 VVVDFSATWCGPCKMIKPFFHSLSEKYSNVIFLEVDVDDAQDVASEAEVKATPTFQFFKK 82
Query: 105 GLVIDKFIGLIENEMIENMVSKLL 128
G + +F G E +E +++L+
Sbjct: 83 GQKVGEFSG-ANKEKLEATINELV 105
>pdb|1M7T|A Chain A, Solution Structure And Dynamics Of The Human-Escherichia
Coli Thioredoxin Chimera: Insights Into Thermodynamic
Stability
Length = 107
Score = 44.3 bits (103), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 18/80 (22%), Positives = 39/80 (48%)
Query: 45 VIVNFHAEWCEPCHLLTPQLKKMLGNSDSIDLAIIDVEKNAELVHTFEVKAVPAVLAVKN 104
V+V+F A WC PC ++ P + ++ +DV+ ++ + ++ +P +L KN
Sbjct: 23 VVVDFSATWCGPCKMIKPFFHSLSEKYSNVIFLEVDVDDAQDVAPKYGIRGIPTLLLFKN 82
Query: 105 GLVIDKFIGLIENEMIENMV 124
G V +G + ++ +
Sbjct: 83 GEVAATKVGALSKGQLKEFL 102
>pdb|1THO|A Chain A, Crystal Structure Of A Mutant Escherichia Coli Thioredoxin
With An Arginine Insertion In The Active Site
Length = 109
Score = 44.3 bits (103), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 21/98 (21%), Positives = 48/98 (48%), Gaps = 2/98 (2%)
Query: 30 NNEQFIKHVMNNPVPVIVNFHAEWC-EPCHLLTPQLKKMLGN-SDSIDLAIIDVEKNAEL 87
++ F V+ ++V+F AEWC PC ++ P L ++ + +A +++++N
Sbjct: 8 TDDSFDTDVLKADGAILVDFWAEWCGRPCKMIAPILDEIADEYQGKLTVAKLNIDQNPGT 67
Query: 88 VHTFEVKAVPAVLAVKNGLVIDKFIGLIENEMIENMVS 125
+ ++ +P +L KNG V +G + ++ +
Sbjct: 68 APKYGIRGIPTLLLFKNGEVAATKVGALSKGQLKEFLD 105
>pdb|2FD3|A Chain A, Crystal Structure Of Thioredoxin Mutant P34h
pdb|2FD3|B Chain B, Crystal Structure Of Thioredoxin Mutant P34h
Length = 108
Score = 43.9 bits (102), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 20/97 (20%), Positives = 47/97 (48%), Gaps = 1/97 (1%)
Query: 30 NNEQFIKHVMNNPVPVIVNFHAEWCEPCHLLTPQLKKMLGN-SDSIDLAIIDVEKNAELV 88
++ F V+ ++V+F AEWC C ++ P L ++ + +A +++++N
Sbjct: 8 TDDSFDTDVLKADGAILVDFWAEWCGHCKMIAPILDEIADEYQGKLTVAKLNIDQNPGTA 67
Query: 89 HTFEVKAVPAVLAVKNGLVIDKFIGLIENEMIENMVS 125
+ ++ +P +L KNG V +G + ++ +
Sbjct: 68 PKYGIRGIPTLLLFKNGEVAATKVGALSKGQLKEFLD 104
>pdb|2DJ2|A Chain A, The Solution Structure Of The Second Thioredoxin Domain Of
Mouse Protein Disulfide-Isomerase A4
Length = 120
Score = 43.5 bits (101), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 23/76 (30%), Positives = 36/76 (47%), Gaps = 4/76 (5%)
Query: 38 VMNNPVPVIVNFHAEWCEPCHLLTPQL----KKMLGNSDSIDLAIIDVEKNAELVHTFEV 93
V+NN ++V F+A WC C L P+ K++ S I LA +D + +L F+V
Sbjct: 20 VVNNADIILVEFYAPWCGHCKKLAPEYEKAAKELSKRSPPIPLAKVDATEQTDLAKRFDV 79
Query: 94 KAVPAVLAVKNGLVID 109
P + + G D
Sbjct: 80 SGYPTLKIFRKGRPFD 95
>pdb|1MEK|A Chain A, Human Protein Disulfide Isomerase, Nmr, 40 Structures
Length = 120
Score = 43.5 bits (101), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 19/65 (29%), Positives = 31/65 (47%), Gaps = 4/65 (6%)
Query: 45 VIVNFHAEWCEPCHLLTPQLKKMLG----NSDSIDLAIIDVEKNAELVHTFEVKAVPAVL 100
++V F+A WC C L P+ K G I LA +D + ++L + V+ P +
Sbjct: 27 LLVEFYAPWCGHCKALAPEYAKAAGKLKAEGSEIRLAKVDATEESDLAQQYGVRGYPTIK 86
Query: 101 AVKNG 105
+NG
Sbjct: 87 FFRNG 91
>pdb|2PPT|A Chain A, Crystal Structure Of Thioredoxin-2
pdb|2PPT|B Chain B, Crystal Structure Of Thioredoxin-2
Length = 155
Score = 43.5 bits (101), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 21/87 (24%), Positives = 42/87 (48%), Gaps = 2/87 (2%)
Query: 43 VPVIVNFHAEWCEPCHLLTPQLKKMLGN-SDSIDLAIIDVEKNAELVHTFEVKAVPAVLA 101
+P++V+F A WC PC + PQ + + + LA ID + + + ++ +PA +
Sbjct: 65 LPLLVDFWAPWCGPCRQMAPQFQAAAATLAGQVRLAKIDTQAHPAVAGRHRIQGIPAFIL 124
Query: 102 VKNGLVIDKFIGLI-ENEMIENMVSKL 127
G + + G +E++ + KL
Sbjct: 125 FHKGRELARAAGARPASELVGFVRGKL 151
>pdb|1TXX|A Chain A, Active-Site Variant Of E.Coli Thioredoxin
Length = 108
Score = 43.1 bits (100), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 20/97 (20%), Positives = 47/97 (48%), Gaps = 1/97 (1%)
Query: 30 NNEQFIKHVMNNPVPVIVNFHAEWCEPCHLLTPQLKKMLGN-SDSIDLAIIDVEKNAELV 88
++ F V+ ++V+F AEWC C ++ P L ++ + +A +++++N
Sbjct: 8 TDDSFDTDVLKADGAILVDFWAEWCVWCKMIAPILDEIADEYQGKLTVAKLNIDQNPGTA 67
Query: 89 HTFEVKAVPAVLAVKNGLVIDKFIGLIENEMIENMVS 125
+ ++ +P +L KNG V +G + ++ +
Sbjct: 68 PKYGIRGIPTLLLFKNGEVAATKVGALSKGQLKEFLD 104
>pdb|1SRX|A Chain A, Three-Dimensional Structure Of Escherichia Coli
Thioredoxin-S2 To 2.8 Angstroms Resolution
Length = 108
Score = 43.1 bits (100), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 20/97 (20%), Positives = 47/97 (48%), Gaps = 1/97 (1%)
Query: 30 NNEQFIKHVMNNPVPVIVNFHAEWCEPCHLLTPQLKKMLGN-SDSIDLAIIDVEKNAELV 88
++ F ++ ++V+F AEWC PC ++ P L ++ + +A +++++N
Sbjct: 8 TDDSFDTDLVKADGAILVDFWAEWCGPCKMIAPILDEIADEYQGKLTVAKLNIDQNPGTA 67
Query: 89 HTFEVKAVPAVLAVKNGLVIDKFIGLIENEMIENMVS 125
+ + +P +L KNG V +G + ++ +
Sbjct: 68 PKYIERGIPTLLLFKNGEVAATKVGALSKGQLKEFLD 104
>pdb|2HSH|A Chain A, Crystal Structure Of C73s Mutant Of Human Thioredoxin-1
Oxidized With H2o2
pdb|1ERV|A Chain A, Human Thioredoxin Mutant With Cys 73 Replaced By Ser
(Reduced Form)
Length = 105
Score = 42.7 bits (99), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 22/84 (26%), Positives = 42/84 (50%), Gaps = 1/84 (1%)
Query: 45 VIVNFHAEWCEPCHLLTPQLKKMLGNSDSIDLAIIDVEKNAELVHTFEVKAVPAVLAVKN 104
V+V+F A WC PC ++ P + ++ +DV+ ++ EVK++P K
Sbjct: 23 VVVDFSATWCGPCKMIKPFFHSLSEKYSNVIFLEVDVDDCQDVASECEVKSMPTFQFFKK 82
Query: 105 GLVIDKFIGLIENEMIENMVSKLL 128
G + +F G E +E +++L+
Sbjct: 83 GQKVGEFSG-ANKEKLEATINELV 105
>pdb|3M9J|A Chain A, Crystal Structure Of Human Thioredoxin C6973S DOUBLE
MUTANT, REDUCED Form
pdb|3M9J|B Chain B, Crystal Structure Of Human Thioredoxin C6973S DOUBLE
MUTANT, REDUCED Form
pdb|3M9K|A Chain A, Crystal Structure Of Human Thioredoxin C6973S
DOUBLE-Mutant, Oxidized Form
pdb|3M9K|B Chain B, Crystal Structure Of Human Thioredoxin C6973S
DOUBLE-Mutant, Oxidized Form
Length = 105
Score = 42.4 bits (98), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 22/84 (26%), Positives = 42/84 (50%), Gaps = 1/84 (1%)
Query: 45 VIVNFHAEWCEPCHLLTPQLKKMLGNSDSIDLAIIDVEKNAELVHTFEVKAVPAVLAVKN 104
V+V+F A WC PC ++ P + ++ +DV+ ++ EVK++P K
Sbjct: 23 VVVDFSATWCGPCKMIKPFFHSLSEKYSNVIFLEVDVDDCQDVASESEVKSMPTFQFFKK 82
Query: 105 GLVIDKFIGLIENEMIENMVSKLL 128
G + +F G E +E +++L+
Sbjct: 83 GQKVGEFSG-ANKEKLEATINELV 105
>pdb|3PIN|A Chain A, Crystal Structure Of Mxr1 From Saccharomyces Cerevisiae In
Complex With Trx2
Length = 104
Score = 42.4 bits (98), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 17/69 (24%), Positives = 36/69 (52%)
Query: 45 VIVNFHAEWCEPCHLLTPQLKKMLGNSDSIDLAIIDVEKNAELVHTFEVKAVPAVLAVKN 104
V+V+F A WC P ++ P ++K +DV++ +++ EV ++P ++ K
Sbjct: 22 VVVDFFATWCGPSKMIAPMIEKFAEQYSDAAFYKLDVDEVSDVAQKAEVSSMPTLIFYKG 81
Query: 105 GLVIDKFIG 113
G + + +G
Sbjct: 82 GKEVTRVVG 90
>pdb|4DSS|B Chain B, Crystal Structure Of Peroxiredoxin Ahp1 From Saccharomyces
Cerevisiae In Complex With Thioredoxin Trx2
Length = 112
Score = 42.4 bits (98), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 17/69 (24%), Positives = 36/69 (52%)
Query: 45 VIVNFHAEWCEPCHLLTPQLKKMLGNSDSIDLAIIDVEKNAELVHTFEVKAVPAVLAVKN 104
V+V+F A WC P ++ P ++K +DV++ +++ EV ++P ++ K
Sbjct: 30 VVVDFFATWCGPSKMIAPMIEKFAEQYSDAAFYKLDVDEVSDVAQKAEVSSMPTLIFYKG 89
Query: 105 GLVIDKFIG 113
G + + +G
Sbjct: 90 GKEVTRVVG 98
>pdb|2DJ1|A Chain A, The Solution Structure Of The First Thioredoxin Domain Of
Mouse Protein Disulfide-Isomerase A4
Length = 140
Score = 42.4 bits (98), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 27/95 (28%), Positives = 42/95 (44%), Gaps = 5/95 (5%)
Query: 45 VIVNFHAEWCEPCHLLTPQLKKMLG----NSDSIDLAIIDVEKNAELVHTFEVKAVPAVL 100
V++ F+A WC C P+ +K+ N I +A ID + L F+V P +
Sbjct: 37 VLLEFYAPWCGHCKQFAPEYEKIASTLKDNDPPIAVAKIDATSASMLASKFDVSGYPTIK 96
Query: 101 AVKNGLVIDKFIGLIENEMIENMVSKLLPKDKTNP 135
+K G +D + G E I V ++ D T P
Sbjct: 97 ILKKGQAVD-YDGSRTQEEIVAKVREVSQPDWTPP 130
>pdb|2IFQ|A Chain A, Crystal Structure Of S-Nitroso Thioredoxin
pdb|2IFQ|C Chain C, Crystal Structure Of S-Nitroso Thioredoxin
Length = 105
Score = 42.4 bits (98), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 22/84 (26%), Positives = 41/84 (48%), Gaps = 1/84 (1%)
Query: 45 VIVNFHAEWCEPCHLLTPQLKKMLGNSDSIDLAIIDVEKNAELVHTFEVKAVPAVLAVKN 104
V+V+F A WC PC ++ P + ++ +DV+ ++ EVK +P K
Sbjct: 23 VVVDFSATWCGPCKMIKPFFHSLSEKYSNVIFLEVDVDDCQDVASEXEVKCMPTFQFFKK 82
Query: 105 GLVIDKFIGLIENEMIENMVSKLL 128
G + +F G E +E +++L+
Sbjct: 83 GQKVGEFSG-ANKEKLEATINELV 105
>pdb|2IFQ|B Chain B, Crystal Structure Of S-Nitroso Thioredoxin
pdb|1AUC|A Chain A, Human Thioredoxin (Oxidized With Diamide)
pdb|1ERT|A Chain A, Human Thioredoxin (Reduced Form)
pdb|1ERU|A Chain A, Human Thioredoxin (Oxidized Form)
Length = 105
Score = 42.0 bits (97), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 22/84 (26%), Positives = 41/84 (48%), Gaps = 1/84 (1%)
Query: 45 VIVNFHAEWCEPCHLLTPQLKKMLGNSDSIDLAIIDVEKNAELVHTFEVKAVPAVLAVKN 104
V+V+F A WC PC ++ P + ++ +DV+ ++ EVK +P K
Sbjct: 23 VVVDFSATWCGPCKMIKPFFHSLSEKYSNVIFLEVDVDDCQDVASECEVKCMPTFQFFKK 82
Query: 105 GLVIDKFIGLIENEMIENMVSKLL 128
G + +F G E +E +++L+
Sbjct: 83 GQKVGEFSG-ANKEKLEATINELV 105
>pdb|3TRX|A Chain A, High-Resolution Three-Dimensional Structure Of Reduced
Recombinant Human Thioredoxin In Solution
pdb|4TRX|A Chain A, High-Resolution Three-Dimensional Structure Of Reduced
Recombinant Human Thioredoxin In Solution
Length = 105
Score = 42.0 bits (97), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 22/84 (26%), Positives = 40/84 (47%), Gaps = 1/84 (1%)
Query: 45 VIVNFHAEWCEPCHLLTPQLKKMLGNSDSIDLAIIDVEKNAELVHTFEVKAVPAVLAVKN 104
V+V+F A WC PC ++ P + ++ +DV+ ++ EVK P K
Sbjct: 23 VVVDFSATWCGPCKMIKPFFHSLSEKYSNVIFLEVDVDDCQDVASECEVKCTPTFQFFKK 82
Query: 105 GLVIDKFIGLIENEMIENMVSKLL 128
G + +F G E +E +++L+
Sbjct: 83 GQKVGEFSG-ANKEKLEATINELV 105
>pdb|1AIU|A Chain A, Human Thioredoxin (D60n Mutant, Reduced Form)
Length = 105
Score = 41.2 bits (95), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 22/84 (26%), Positives = 40/84 (47%), Gaps = 1/84 (1%)
Query: 45 VIVNFHAEWCEPCHLLTPQLKKMLGNSDSIDLAIIDVEKNAELVHTFEVKAVPAVLAVKN 104
V+V+F A WC PC ++ P + ++ +DV ++ EVK +P K
Sbjct: 23 VVVDFSATWCGPCKMIKPFFHSLSEKYSNVIFLEVDVNDCQDVASECEVKCMPTFQFFKK 82
Query: 105 GLVIDKFIGLIENEMIENMVSKLL 128
G + +F G E +E +++L+
Sbjct: 83 GQKVGEFSG-ANKEKLEATINELV 105
>pdb|3IDV|A Chain A, Crystal Structure Of The A0a Fragment Of Erp72
Length = 241
Score = 40.8 bits (94), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 28/95 (29%), Positives = 44/95 (46%), Gaps = 5/95 (5%)
Query: 45 VIVNFHAEWCEPCHLLTPQLKK---MLGNSD-SIDLAIIDVEKNAELVHTFEVKAVPAVL 100
V++ F+A WC C P+ +K +L + D I +A ID + L F+V P +
Sbjct: 35 VLLEFYAPWCGHCKQFAPEYEKIANILKDKDPPIPVAKIDATSASVLASRFDVSGYPTIK 94
Query: 101 AVKNGLVIDKFIGLIENEMIENMVSKLLPKDKTNP 135
+K G +D + G E I V ++ D T P
Sbjct: 95 ILKKGQAVD-YEGSRTQEEIVAKVREVSQPDWTPP 128
Score = 40.8 bits (94), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 22/77 (28%), Positives = 35/77 (45%), Gaps = 4/77 (5%)
Query: 37 HVMNNPVPVIVNFHAEWCEPCHLLTPQL----KKMLGNSDSIDLAIIDVEKNAELVHTFE 92
V+N+ ++V F+A WC C L P+ K++ S I LA +D +L F+
Sbjct: 142 EVVNDADIILVEFYAPWCGHCKKLAPEYEKAAKELSKRSPPIPLAKVDATAETDLAKRFD 201
Query: 93 VKAVPAVLAVKNGLVID 109
V P + + G D
Sbjct: 202 VSGYPTLKIFRKGRPYD 218
>pdb|1MDI|A Chain A, High Resolution Solution Nmr Structure Of Mixed Disulfide
Intermediate Between Mutant Human Thioredoxin And A 13
Residue Peptide Comprising Its Target Site In Human Nfkb
pdb|1MDJ|A Chain A, High Resolution Solution Nmr Structure Of Mixed Disulfide
Intermediate Between Human Thioredoxin (c35a, C62a,
C69a, C73a) Mutant And A 13 Residue Peptide Comprising
Its Target Site In Human Nfkb (residues 56-68 Of The P50
Subunit Of Nfkb)
pdb|1MDK|A Chain A, High Resolution Solution Nmr Structure Of Mixed Disulfide
Intermediate Between Human Thioredoxin (C35a, C62a,
C69a, C73a) Mutant And A 13 Residue Peptide Comprising
Its Target Site In Human Nfkb (Residues 56-68 Of The P50
Subunit Of Nfkb)
pdb|1CQH|A Chain A, High Resolution Solution Nmr Structure Of Mixed Disulfide
Intermediate Between Human Thioredoxin (C35a, C62a,
C69a, C73a) Mutant And A 13 Residue Peptide Comprising
Its Target Site In Human Ref-1 (Residues 59-71 Of The
P50 Subunit Of Nfkb), Nmr, Minimized Average Structure
pdb|1CQG|A Chain A, High Resolution Solution Nmr Structure Of Mixed Disulfide
Intermediate Between Human Thioredoxin (C35a, C62a,
C69a, C73a) Mutant And A 13 Residue Peptide Comprising
Its Target Site In Human Ref-1 (Residues 59-71 Of The
P50 Subunit Of Nfkb), Nmr, 31 Structures
Length = 105
Score = 40.4 bits (93), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 22/84 (26%), Positives = 40/84 (47%), Gaps = 1/84 (1%)
Query: 45 VIVNFHAEWCEPCHLLTPQLKKMLGNSDSIDLAIIDVEKNAELVHTFEVKAVPAVLAVKN 104
V+V+F A WC P ++ P + ++ +DV+ ++ EVKA P K
Sbjct: 23 VVVDFSATWCGPAKMIKPFFHSLSEKYSNVIFLEVDVDDAQDVASEAEVKATPTFQFFKK 82
Query: 105 GLVIDKFIGLIENEMIENMVSKLL 128
G + +F G E +E +++L+
Sbjct: 83 GQKVGEFSG-ANKEKLEATINELV 105
>pdb|1ZCP|A Chain A, Crystal Structure Of A Catalytic Site Mutant E. Coli Trxa
(Caca)
pdb|1ZCP|B Chain B, Crystal Structure Of A Catalytic Site Mutant E. Coli Trxa
(Caca)
pdb|1ZCP|C Chain C, Crystal Structure Of A Catalytic Site Mutant E. Coli Trxa
(Caca)
pdb|1ZCP|D Chain D, Crystal Structure Of A Catalytic Site Mutant E. Coli Trxa
(Caca)
Length = 108
Score = 40.4 bits (93), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 19/96 (19%), Positives = 46/96 (47%), Gaps = 1/96 (1%)
Query: 30 NNEQFIKHVMNNPVPVIVNFHAEWCEPCHLLTPQLKKMLGN-SDSIDLAIIDVEKNAELV 88
++ F V+ ++V+F AEWC ++ P L ++ + +A +++++N
Sbjct: 8 TDDSFDTDVLKADGAILVDFWAEWCACAKMIAPILDEIADEYQGKLTVAKLNIDQNPGTA 67
Query: 89 HTFEVKAVPAVLAVKNGLVIDKFIGLIENEMIENMV 124
+ ++ +P +L KNG V +G + ++ +
Sbjct: 68 PKYGIRGIPTLLLFKNGEVAATKVGALSKGQLKEFL 103
>pdb|3KD0|A Chain A, Human Thioredoxin C35s,C62s,C69s,C73s Mutant Showing
Cadmium Chloride Bound To The Active Site
Length = 105
Score = 40.4 bits (93), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 21/84 (25%), Positives = 42/84 (50%), Gaps = 1/84 (1%)
Query: 45 VIVNFHAEWCEPCHLLTPQLKKMLGNSDSIDLAIIDVEKNAELVHTFEVKAVPAVLAVKN 104
V+V+F A WC P ++ P + ++ +DV+ + ++ EVK++P K
Sbjct: 23 VVVDFSATWCGPSKMIKPFFHSLSEKYSNVIFLEVDVDDSQDVASESEVKSMPTFQFFKK 82
Query: 105 GLVIDKFIGLIENEMIENMVSKLL 128
G + +F G E +E +++L+
Sbjct: 83 GQKVGEFSG-ANKEKLEATINELV 105
>pdb|2R2J|A Chain A, Crystal Structure Of Human Erp44
Length = 382
Score = 40.4 bits (93), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 18/78 (23%), Positives = 38/78 (48%), Gaps = 7/78 (8%)
Query: 35 IKHVMNNPVPVIVNFHAEWCEPCHLLTP-------QLKKMLGNSDSIDLAIIDVEKNAEL 87
I ++NN +VNF+A+WC L P +K+ N + + A +D ++++++
Sbjct: 15 IDEILNNADVALVNFYADWCRFSQXLHPIFEEASDVIKEEFPNENQVVFARVDCDQHSDI 74
Query: 88 VHTFEVKAVPAVLAVKNG 105
+ + P + +NG
Sbjct: 75 AQRYRISKYPTLKLFRNG 92
>pdb|2DML|A Chain A, The Solution Structure Of The First Thioredoxin Domain
Of Mouse Protein Disulfide-Isomerase A6
Length = 130
Score = 38.9 bits (89), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 18/67 (26%), Positives = 33/67 (49%), Gaps = 1/67 (1%)
Query: 34 FIKHVMNNPVPVIVNFHAEWCEPCHLLTPQLKKMLGN-SDSIDLAIIDVEKNAELVHTFE 92
F + V+ + +V F+A WC C LTP+ KK D + + ++ +K+ L +
Sbjct: 27 FNREVIQSDGLWLVEFYAPWCGHCQRLTPEWKKAATALKDVVKVGAVNADKHQSLGGQYG 86
Query: 93 VKAVPAV 99
V+ P +
Sbjct: 87 VQGFPTI 93
>pdb|1OAZ|A Chain A, Ige Fv Spe7 Complexed With A Recombinant Thioredoxin
pdb|1OAZ|B Chain B, Ige Fv Spe7 Complexed With A Recombinant Thioredoxin
Length = 123
Score = 38.5 bits (88), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 21/111 (18%), Positives = 48/111 (43%), Gaps = 15/111 (13%)
Query: 30 NNEQFIKHVMNNPVPVIVNFHAEWC--------------EPCHLLTPQLKKMLGN-SDSI 74
++ F V+ ++V+F AEWC PC ++ P L ++ +
Sbjct: 9 TDDSFDTDVLKADGAILVDFWAEWCGPIEESDDRRYDLVGPCKMIAPILDEIADEYQGKL 68
Query: 75 DLAIIDVEKNAELVHTFEVKAVPAVLAVKNGLVIDKFIGLIENEMIENMVS 125
+A +++++N + ++ +P +L KNG V +G + ++ +
Sbjct: 69 TVAKLNIDQNPGTAPKYGIRGIPTLLLFKNGEVAATKVGALSKGQLKEFLD 119
>pdb|3QFA|C Chain C, Crystal Structure Of The Human Thioredoxin
Reductase-Thioredoxin Complex
pdb|3QFA|D Chain D, Crystal Structure Of The Human Thioredoxin
Reductase-Thioredoxin Complex
pdb|3QFB|C Chain C, Crystal Structure Of The Human Thioredoxin
Reductase-Thioredoxin Complex
pdb|3QFB|D Chain D, Crystal Structure Of The Human Thioredoxin
Reductase-Thioredoxin Complex
Length = 116
Score = 38.5 bits (88), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 21/84 (25%), Positives = 41/84 (48%), Gaps = 1/84 (1%)
Query: 45 VIVNFHAEWCEPCHLLTPQLKKMLGNSDSIDLAIIDVEKNAELVHTFEVKAVPAVLAVKN 104
V+V+F A WC P ++ P + ++ +DV+ ++ EVK++P K
Sbjct: 34 VVVDFSATWCGPSKMIKPFFHSLSEKYSNVIFLEVDVDDCQDVASECEVKSMPTFQFFKK 93
Query: 105 GLVIDKFIGLIENEMIENMVSKLL 128
G + +F G E +E +++L+
Sbjct: 94 GQKVGEFSG-ANKEKLEATINELV 116
>pdb|1X5E|A Chain A, The Solution Structure Of The Thioredoxin-Like Domain Of
Human Thioredoxin-Related Transmembrane Protein
Length = 126
Score = 38.5 bits (88), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 17/62 (27%), Positives = 31/62 (50%), Gaps = 2/62 (3%)
Query: 46 IVNFHAEWCEPCHLLTPQLKKM--LGNSDSIDLAIIDVEKNAELVHTFEVKAVPAVLAVK 103
++ F+A WC C L P+ + G +++A +DV + L F + A+P + K
Sbjct: 26 MIEFYAPWCPACQNLQPEWESFAEWGEDLEVNIAKVDVTEQPGLSGRFIINALPTIYHCK 85
Query: 104 NG 105
+G
Sbjct: 86 DG 87
>pdb|3E3E|A Chain A, Human Thioredoxin Double Mutant C35s,C73r
pdb|3E3E|B Chain B, Human Thioredoxin Double Mutant C35s,C73r
Length = 105
Score = 37.7 bits (86), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 21/84 (25%), Positives = 40/84 (47%), Gaps = 1/84 (1%)
Query: 45 VIVNFHAEWCEPCHLLTPQLKKMLGNSDSIDLAIIDVEKNAELVHTFEVKAVPAVLAVKN 104
V+V+F A WC P ++ P + ++ +DV+ ++ EVK +P K
Sbjct: 23 VVVDFSATWCGPSKMIKPFFHSLSEKYSNVIFLEVDVDDCQDVASECEVKRMPTFQFFKK 82
Query: 105 GLVIDKFIGLIENEMIENMVSKLL 128
G + +F G E +E +++L+
Sbjct: 83 GQKVGEFSG-ANKEKLEATINELV 105
>pdb|1FAA|A Chain A, Crystal Structure Of Thioredoxin F From Spinach
Chloroplast (Long Form)
Length = 124
Score = 37.0 bits (84), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 18/83 (21%), Positives = 42/83 (50%), Gaps = 5/83 (6%)
Query: 44 PVIVNFHAEWCEPCHLLTPQLKKMLGNSDSIDLAIIDVEKNAE---LVHTFEVKAVPAVL 100
PV+++ +WC PC + P+ +K+ + +D+ + ++ N E L ++ VP
Sbjct: 39 PVVLDMFTQWCGPCKAMAPKYEKL--AEEYLDVIFLKLDCNQENKTLAKELGIRVVPTFK 96
Query: 101 AVKNGLVIDKFIGLIENEMIENM 123
+K V+ + G ++++E +
Sbjct: 97 ILKENSVVGEVTGAKYDKLLEAI 119
>pdb|1F9M|A Chain A, Crystal Structure Of Thioredoxin F From Spinach
Chloroplast (Short Form)
pdb|1F9M|B Chain B, Crystal Structure Of Thioredoxin F From Spinach
Chloroplast (Short Form)
Length = 112
Score = 37.0 bits (84), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 18/83 (21%), Positives = 42/83 (50%), Gaps = 5/83 (6%)
Query: 44 PVIVNFHAEWCEPCHLLTPQLKKMLGNSDSIDLAIIDVEKNAE---LVHTFEVKAVPAVL 100
PV+++ +WC PC + P+ +K+ + +D+ + ++ N E L ++ VP
Sbjct: 27 PVVLDMFTQWCGPCKAMAPKYEKL--AEEYLDVIFLKLDCNQENKTLAKELGIRVVPTFK 84
Query: 101 AVKNGLVIDKFIGLIENEMIENM 123
+K V+ + G ++++E +
Sbjct: 85 ILKENSVVGEVTGAKYDKLLEAI 107
>pdb|3ED3|A Chain A, Crystal Structure Of The Yeast DithiolDISULFIDE
Oxidoreductase Mpd1p
pdb|3ED3|B Chain B, Crystal Structure Of The Yeast DithiolDISULFIDE
Oxidoreductase Mpd1p
Length = 298
Score = 36.2 bits (82), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 19/75 (25%), Positives = 34/75 (45%), Gaps = 3/75 (4%)
Query: 32 EQFIKHVMNNPVPVIVNFHAEWCEPCHLLTPQLKKMLGNSDS-IDLAII--DVEKNAELV 88
+ F K + N +V F+A WC C L+ +K D + +A + D+ KN L
Sbjct: 25 KSFDKAIHNTNYTSLVEFYAPWCGHCKKLSSTFRKAAKRLDGVVQVAAVNCDLNKNKALC 84
Query: 89 HTFEVKAVPAVLAVK 103
++V P ++ +
Sbjct: 85 AKYDVNGFPTLMVFR 99
>pdb|3APS|A Chain A, Crystal Structure Of Trx4 Domain Of Erdj5
pdb|3APS|B Chain B, Crystal Structure Of Trx4 Domain Of Erdj5
Length = 122
Score = 35.4 bits (80), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 17/71 (23%), Positives = 32/71 (45%), Gaps = 5/71 (7%)
Query: 32 EQFIKHVMNNPVPVIVNFHAEWCEPCHLLTPQ---LKKMLGNSDSIDLAIIDVEKNAELV 88
+ F + V+ +V+F+A WC PC P+ L +M+ + +D + +
Sbjct: 11 QTFNEKVLQGKTHWVVDFYAPWCGPCQNFAPEFELLARMI--KGKVRAGKVDCQAYPQTC 68
Query: 89 HTFEVKAVPAV 99
+KA P+V
Sbjct: 69 QKAGIKAYPSV 79
>pdb|3F8U|A Chain A, TapasinERP57 HETERODIMER
pdb|3F8U|C Chain C, TapasinERP57 HETERODIMER
Length = 481
Score = 35.0 bits (79), Expect = 0.012, Method: Composition-based stats.
Identities = 21/71 (29%), Positives = 36/71 (50%), Gaps = 4/71 (5%)
Query: 32 EQFIKHVMNNPVPVIVNFHAEWCEPCHLLTPQLKKM---LGNSDSIDLAIIDVEKNAELV 88
E F + V N V++ F+A WC C L P+ K++ L +I +A +D N ++
Sbjct: 360 ENFDEIVNNENKDVLIEFYAPWCGHCKNLEPKYKELGEKLSKDPNIVIAKMDATAN-DVP 418
Query: 89 HTFEVKAVPAV 99
+EV+ P +
Sbjct: 419 SPYEVRGFPTI 429
>pdb|2DMM|A Chain A, The Solution Structure Of The Second Thioredoxin Domain Of
Human Protein Disulfide-Isomerase A3
Length = 142
Score = 34.7 bits (78), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 26/108 (24%), Positives = 45/108 (41%), Gaps = 15/108 (13%)
Query: 32 EQFIKHVMNNPVPVIVNFHAEWCEPCHLLTPQLKKM---LGNSDSIDLAIIDVEKNAELV 88
E F + V N V++ F+A WC C L P+ K++ L +I +A +D N ++
Sbjct: 35 ENFDEIVNNENKDVLIEFYAPWCGHCKNLEPKYKELGEKLSKDPNIVIAKMDATAN-DVP 93
Query: 89 HTFEVKAVPAVL-----------AVKNGLVIDKFIGLIENEMIENMVS 125
+EV+ P + + G + FI ++ E S
Sbjct: 94 SPYEVRGFPTIYFSPANKKLNPKKYEGGRELSDFISYLQREATSGPSS 141
>pdb|1OC9|A Chain A, Tryparedoxin Ii From C.Fasciculata Solved By Mr
Length = 152
Score = 34.7 bits (78), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 22/86 (25%), Positives = 35/86 (40%), Gaps = 27/86 (31%)
Query: 45 VIVNFHAEWCEPCHLLTPQL---KKMLGNSDSIDLAIIDVEKNAE--------------- 86
V F A WC PC TPQL K S + ++ +I +++AE
Sbjct: 34 VFFYFSASWCPPCRAFTPQLIDFYKAHAESKNFEVMLISWDESAEDFKDYYAKMPWLALP 93
Query: 87 ---------LVHTFEVKAVPAVLAVK 103
L F+VK++P ++ V+
Sbjct: 94 FEDRKGMEFLTTGFDVKSIPTLVGVE 119
>pdb|2HXK|A Chain A, Crystal Structure Of S-Nitroso Thioredoxin
pdb|2HXK|B Chain B, Crystal Structure Of S-Nitroso Thioredoxin
pdb|2HXK|C Chain C, Crystal Structure Of S-Nitroso Thioredoxin
pdb|2IIY|A Chain A, Crystal Structure Of S-Nitroso Thioredoxin
Length = 105
Score = 34.3 bits (77), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 22/84 (26%), Positives = 41/84 (48%), Gaps = 1/84 (1%)
Query: 45 VIVNFHAEWCEPCHLLTPQLKKMLGNSDSIDLAIIDVEKNAELVHTFEVKAVPAVLAVKN 104
V+V+F A WC PC ++ P + ++ +DV+ ++ EVK +P K
Sbjct: 23 VVVDFSATWCGPCKMIKPFFHSLSEKYSNVIFLEVDVDDXQDVASEXEVKCMPTFQFFKK 82
Query: 105 GLVIDKFIGLIENEMIENMVSKLL 128
G + +F G E +E +++L+
Sbjct: 83 GQKVGEFSG-ANKEKLEATINELV 105
>pdb|1X5D|A Chain A, The Solution Structure Of The Second Thioredoxin-Like
Domain Of Human Protein Disulfide-Isomerase A6
Length = 133
Score = 34.3 bits (77), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 20/85 (23%), Positives = 37/85 (43%), Gaps = 6/85 (7%)
Query: 27 IIE-NNEQFIKHVMNNPVPVIVNFHAEWCEPCHLLTPQLKKMLG-----NSDSIDLAIID 80
+IE ++ F K+V+++ +V F+A WC C L P+ + LA +D
Sbjct: 9 VIELTDDSFDKNVLDSEDVWMVEFYAPWCGHCKNLEPEWAAAASEVKEQTKGKVKLAAVD 68
Query: 81 VEKNAELVHTFEVKAVPAVLAVKNG 105
N L + ++ P + + G
Sbjct: 69 ATVNQVLASRYGIRGFPTIKIFQKG 93
>pdb|3CXG|A Chain A, Crystal Structure Of Plasmodium Falciparum Thioredoxin,
Pfi0790w
pdb|3CXG|B Chain B, Crystal Structure Of Plasmodium Falciparum Thioredoxin,
Pfi0790w
Length = 133
Score = 34.3 bits (77), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 17/55 (30%), Positives = 29/55 (52%), Gaps = 1/55 (1%)
Query: 44 PVIVNFHAEWCEPCHLLTPQLKKMLGNSDSIDLAIIDVEKNAELVHTFEVKAVPA 98
+++ F A WC+PC+ + K L N + L IDV+ + +L +KA+P
Sbjct: 42 SIVIKFGAVWCKPCNKIKEYFKNQL-NYYYVTLVDIDVDIHPKLNDQHNIKALPT 95
>pdb|1ERW|A Chain A, Human Thioredoxin Double Mutant With Cys 32 Replaced By
Ser And Cys 35 Replaced By Ser
Length = 105
Score = 33.9 bits (76), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 20/84 (23%), Positives = 39/84 (46%), Gaps = 1/84 (1%)
Query: 45 VIVNFHAEWCEPCHLLTPQLKKMLGNSDSIDLAIIDVEKNAELVHTFEVKAVPAVLAVKN 104
V+V+F A W P ++ P + ++ +DV+ ++ EVK +P K
Sbjct: 23 VVVDFSATWSGPSKMIKPFFHSLSEKYSNVIFLEVDVDDCQDVASECEVKCMPTFQFFKK 82
Query: 105 GLVIDKFIGLIENEMIENMVSKLL 128
G + +F G E +E +++L+
Sbjct: 83 GQKVGEFSG-ANKEKLEATINELV 105
>pdb|1J08|A Chain A, Crystal Structure Of Glutaredoxin-Like Protein From
Pyrococcus Horikoshii
pdb|1J08|B Chain B, Crystal Structure Of Glutaredoxin-Like Protein From
Pyrococcus Horikoshii
pdb|1J08|C Chain C, Crystal Structure Of Glutaredoxin-Like Protein From
Pyrococcus Horikoshii
pdb|1J08|D Chain D, Crystal Structure Of Glutaredoxin-Like Protein From
Pyrococcus Horikoshii
pdb|1J08|E Chain E, Crystal Structure Of Glutaredoxin-Like Protein From
Pyrococcus Horikoshii
pdb|1J08|F Chain F, Crystal Structure Of Glutaredoxin-Like Protein From
Pyrococcus Horikoshii
pdb|1J08|G Chain G, Crystal Structure Of Glutaredoxin-Like Protein From
Pyrococcus Horikoshii
pdb|1J08|H Chain H, Crystal Structure Of Glutaredoxin-Like Protein From
Pyrococcus Horikoshii
Length = 226
Score = 33.9 bits (76), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 22/85 (25%), Positives = 40/85 (47%), Gaps = 6/85 (7%)
Query: 27 IIENNEQFIKH----VMNNPVPVIVNFHAEWCEPCHLLTPQLKKMLGNSDSIDLAIIDVE 82
I E +++ IK M NPV +IV E C+ C L ++++ +D + I+D +
Sbjct: 4 ISEEDKRIIKEEFFSKMVNPVKLIVFIGKEHCQYCDQLKQLVQELSELTDKLSYEIVDFD 63
Query: 83 --KNAELVHTFEVKAVPAVLAVKNG 105
+ EL + + PA ++G
Sbjct: 64 TPEGKELAEKYRIDRAPATTITQDG 88
>pdb|1EP7|A Chain A, Crystal Structure Of Wt Thioredoxin H From Chlamydomonas
Reinhardtii
pdb|1EP7|B Chain B, Crystal Structure Of Wt Thioredoxin H From Chlamydomonas
Reinhardtii
pdb|1TOF|A Chain A, Thioredoxin H (Oxidized Form), Nmr, 23 Structures
Length = 112
Score = 33.5 bits (75), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 9/19 (47%), Positives = 14/19 (73%)
Query: 44 PVIVNFHAEWCEPCHLLTP 62
P++V+F A WC PC ++ P
Sbjct: 26 PIVVDFTATWCGPCKMIAP 44
>pdb|3UVT|A Chain A, Crystal Structure Of The Third Catalytic Domain Of Erp46
pdb|3UVT|B Chain B, Crystal Structure Of The Third Catalytic Domain Of Erp46
pdb|3UVT|C Chain C, Crystal Structure Of The Third Catalytic Domain Of Erp46
pdb|3UVT|D Chain D, Crystal Structure Of The Third Catalytic Domain Of Erp46
pdb|3UVT|E Chain E, Crystal Structure Of The Third Catalytic Domain Of Erp46
Length = 111
Score = 33.1 bits (74), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 16/73 (21%), Positives = 28/73 (38%), Gaps = 4/73 (5%)
Query: 45 VIVNFHAEWCEPCHLLTPQL----KKMLGNSDSIDLAIIDVEKNAELVHTFEVKAVPAVL 100
+ F+A WC C L P KK + +A +D + + V+ P +L
Sbjct: 24 TFIKFYAPWCGHCKTLAPTWEELSKKEFPGLAGVKIAEVDCTAERNICSKYSVRGYPTLL 83
Query: 101 AVKNGLVIDKFIG 113
+ G + + G
Sbjct: 84 LFRGGKKVSEHSG 96
>pdb|3UJ1|A Chain A, Crystal Structure Of The Third Thioredoxin Domain Of Human
Erp46
Length = 110
Score = 33.1 bits (74), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 16/73 (21%), Positives = 28/73 (38%), Gaps = 4/73 (5%)
Query: 45 VIVNFHAEWCEPCHLLTPQL----KKMLGNSDSIDLAIIDVEKNAELVHTFEVKAVPAVL 100
+ F+A WC C L P KK + +A +D + + V+ P +L
Sbjct: 19 TFIKFYAPWCGHCKTLAPTWEELSKKEFPGLAGVKIAEVDCTAERNICSKYSVRGYPTLL 78
Query: 101 AVKNGLVIDKFIG 113
+ G + + G
Sbjct: 79 LFRGGKKVSEHSG 91
>pdb|1KNG|A Chain A, Crystal Structure Of Ccmg Reducing Oxidoreductase At 1.14
A
Length = 156
Score = 33.1 bits (74), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 27/108 (25%), Positives = 42/108 (38%), Gaps = 26/108 (24%)
Query: 46 IVNFHAEWCEPCHLLTPQLKKM----------LGNSDSID------------LAIIDVEK 83
+VN A WC PCH P L ++ + D+ D + V+
Sbjct: 46 LVNVWASWCVPCHDEAPLLTELGKDKRFQLVGINYKDAADNARRFLGRYGNPFGRVGVDA 105
Query: 84 NAELVHTFEVKAVPAVLAV-KNGLVIDKFIGLIENEMIENMVSKLLPK 130
N + V VP V + G ++ K +G I +N+ S LLP+
Sbjct: 106 NGRASIEWGVYGVPETFVVGREGTIVYKLVGPI---TPDNLRSVLLPQ 150
>pdb|2DIZ|A Chain A, The Solution Structure Of The Third Thioredoxin Domain Of
Human Thioredoxin Domain-Containing Protein 5
Length = 117
Score = 33.1 bits (74), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 16/73 (21%), Positives = 28/73 (38%), Gaps = 4/73 (5%)
Query: 45 VIVNFHAEWCEPCHLLTPQL----KKMLGNSDSIDLAIIDVEKNAELVHTFEVKAVPAVL 100
+ F+A WC C L P KK + +A +D + + V+ P +L
Sbjct: 26 TFIKFYAPWCGHCKTLAPTWEELSKKEFPGLAGVKIAEVDCTAERNICSKYSVRGYPTLL 85
Query: 101 AVKNGLVIDKFIG 113
+ G + + G
Sbjct: 86 LFRGGKKVSEHSG 98
>pdb|1O6J|A Chain A, Tryparedoxin Ii From C.Fasciculata Solved By Sulphur
Phasing
pdb|1O6J|B Chain B, Tryparedoxin Ii From C.Fasciculata Solved By Sulphur
Phasing
Length = 150
Score = 32.7 bits (73), Expect = 0.056, Method: Compositional matrix adjust.
Identities = 21/86 (24%), Positives = 34/86 (39%), Gaps = 27/86 (31%)
Query: 45 VIVNFHAEWCEPCHLLTPQL---KKMLGNSDSIDLAIIDVEKNAE--------------- 86
V F A WC PC TPQL K + ++ +I +++AE
Sbjct: 32 VFFYFSASWCPPCRAFTPQLIDFYKAHAEKKNFEVMLISWDESAEDFKDYYAKMPWLALP 91
Query: 87 ---------LVHTFEVKAVPAVLAVK 103
L F+VK++P ++ V+
Sbjct: 92 FEDRKGMEFLTTGFDVKSIPTLVGVE 117
>pdb|1FG4|A Chain A, Structure Of Tryparedoxin Ii
pdb|1FG4|B Chain B, Structure Of Tryparedoxin Ii
Length = 149
Score = 32.7 bits (73), Expect = 0.057, Method: Compositional matrix adjust.
Identities = 21/86 (24%), Positives = 34/86 (39%), Gaps = 27/86 (31%)
Query: 45 VIVNFHAEWCEPCHLLTPQL---KKMLGNSDSIDLAIIDVEKNAE--------------- 86
V F A WC PC TPQL K + ++ +I +++AE
Sbjct: 31 VFFYFSASWCPPCRAFTPQLIDFYKAHAEKKNFEVMLISWDESAEDFKDYYAKMPWLALP 90
Query: 87 ---------LVHTFEVKAVPAVLAVK 103
L F+VK++P ++ V+
Sbjct: 91 FEDRKGMEFLTTGFDVKSIPTLVGVE 116
>pdb|2PU9|C Chain C, Crystal Srtucture Of The Binary Complex Between
Ferredoxin: Thioredoxin Reductase And Thioredoxin F
pdb|2PVO|C Chain C, Crystal Srtucture Of The Ternary Complex Between
Thioredoxin F, Ferredoxin, And Ferredoxin: Thioredoxin
Reductase
Length = 111
Score = 32.7 bits (73), Expect = 0.060, Method: Compositional matrix adjust.
Identities = 17/83 (20%), Positives = 41/83 (49%), Gaps = 5/83 (6%)
Query: 44 PVIVNFHAEWCEPCHLLTPQLKKMLGNSDSIDLAIIDVEKNAE---LVHTFEVKAVPAVL 100
PV+++ +WC P + P+ +K+ + +D+ + ++ N E L ++ VP
Sbjct: 26 PVVLDMFTQWCGPSKAMAPKYEKL--AEEYLDVIFLKLDCNQENKTLAKELGIRVVPTFK 83
Query: 101 AVKNGLVIDKFIGLIENEMIENM 123
+K V+ + G ++++E +
Sbjct: 84 ILKENSVVGEVTGAKYDKLLEAI 106
>pdb|2WZ9|A Chain A, Crystal Structure Of The Thioredoxin Domain Of Human Txnl2
Length = 153
Score = 32.7 bits (73), Expect = 0.062, Method: Compositional matrix adjust.
Identities = 17/79 (21%), Positives = 35/79 (44%)
Query: 45 VIVNFHAEWCEPCHLLTPQLKKMLGNSDSIDLAIIDVEKNAELVHTFEVKAVPAVLAVKN 104
++V+F A W C + + ++ + ++ E E+ +E+ +VP L KN
Sbjct: 35 LVVHFWAPWAPQCAQMNEVMAELAKELPQVSFVKLEAEGVPEVSEKYEISSVPTFLFFKN 94
Query: 105 GLVIDKFIGLIENEMIENM 123
ID+ G E+ + +
Sbjct: 95 SQKIDRLDGAHAPELTKKV 113
>pdb|1O81|A Chain A, Tryparedoxin Ii From C.fasciculata Solved By Sulphur
Phasing
pdb|1O81|B Chain B, Tryparedoxin Ii From C.fasciculata Solved By Sulphur
Phasing
pdb|1OC9|B Chain B, Tryparedoxin Ii From C.Fasciculata Solved By Mr
pdb|1OC8|A Chain A, Tryparedoxin Ii From C.Fasciculata Solved By Mr
pdb|1OC8|B Chain B, Tryparedoxin Ii From C.Fasciculata Solved By Mr
Length = 152
Score = 32.7 bits (73), Expect = 0.063, Method: Compositional matrix adjust.
Identities = 21/86 (24%), Positives = 34/86 (39%), Gaps = 27/86 (31%)
Query: 45 VIVNFHAEWCEPCHLLTPQL---KKMLGNSDSIDLAIIDVEKNAE--------------- 86
V F A WC PC TPQL K + ++ +I +++AE
Sbjct: 34 VFFYFSASWCPPCRAFTPQLIDFYKAHAEKKNFEVMLISWDESAEDFKDYYAKMPWLALP 93
Query: 87 ---------LVHTFEVKAVPAVLAVK 103
L F+VK++P ++ V+
Sbjct: 94 FEDRKGMEFLTTGFDVKSIPTLVGVE 119
>pdb|1EP8|A Chain A, Crystal Structure Of A Mutated Thioredoxin, D30a, From
Chlamydomonas Reinhardtii
pdb|1EP8|B Chain B, Crystal Structure Of A Mutated Thioredoxin, D30a, From
Chlamydomonas Reinhardtii
Length = 112
Score = 32.7 bits (73), Expect = 0.068, Method: Compositional matrix adjust.
Identities = 9/19 (47%), Positives = 13/19 (68%)
Query: 44 PVIVNFHAEWCEPCHLLTP 62
P++V F A WC PC ++ P
Sbjct: 26 PIVVAFTATWCGPCKMIAP 44
>pdb|2DIY|A Chain A, The Solution Structure Of The Thioredoxin Domain Of Human
Thioredoxin-Like Protein 2
Length = 130
Score = 32.7 bits (73), Expect = 0.070, Method: Compositional matrix adjust.
Identities = 17/79 (21%), Positives = 35/79 (44%)
Query: 45 VIVNFHAEWCEPCHLLTPQLKKMLGNSDSIDLAIIDVEKNAELVHTFEVKAVPAVLAVKN 104
++V+F A W C + + ++ + ++ E E+ +E+ +VP L KN
Sbjct: 41 LVVHFWAPWAPQCAQMNEVMAELAKELPQVSFVKLEAEGVPEVSEKYEISSVPTFLFFKN 100
Query: 105 GLVIDKFIGLIENEMIENM 123
ID+ G E+ + +
Sbjct: 101 SQKIDRLDGAHAPELTKKV 119
>pdb|1A8L|A Chain A, Protein Disulfide Oxidoreductase From Archaeon Pyrococcus
Furiosus
Length = 226
Score = 32.3 bits (72), Expect = 0.082, Method: Compositional matrix adjust.
Identities = 17/69 (24%), Positives = 33/69 (47%), Gaps = 2/69 (2%)
Query: 39 MNNPVPVIVNFHAEWCEPCHLLTPQLKKMLGNSDSIDLAIIDVE--KNAELVHTFEVKAV 96
M NPV +IV + C+ C L ++++ +D + I+D + + EL + +
Sbjct: 20 MVNPVKLIVFVRKDHCQYCDQLKQLVQELSELTDKLSYEIVDFDTPEGKELAKRYRIDRA 79
Query: 97 PAVLAVKNG 105
PA ++G
Sbjct: 80 PATTITQDG 88
>pdb|2DJ3|A Chain A, The Solution Structure Of The Third Thioredoxin Domain Of
Mouse Protein Disulfide-Isomerase A4
Length = 133
Score = 31.6 bits (70), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 20/72 (27%), Positives = 32/72 (44%), Gaps = 5/72 (6%)
Query: 38 VMNNPVPVIVNFHAEWCEPCHLLTPQL----KKMLGNSDSIDLAIIDVEKNAELVHTFEV 93
VM+ V++ F+A WC C L P KK G D + +A +D N ++V
Sbjct: 21 VMDPKKDVLIEFYAPWCGHCKQLEPIYTSLGKKYKGQKDLV-IAKMDATANDITNDQYKV 79
Query: 94 KAVPAVLAVKNG 105
+ P + +G
Sbjct: 80 EGFPTIYFAPSG 91
>pdb|3ERW|A Chain A, Crystal Structure Of Stoa From Bacillus Subtilis
pdb|3ERW|B Chain B, Crystal Structure Of Stoa From Bacillus Subtilis
pdb|3ERW|C Chain C, Crystal Structure Of Stoa From Bacillus Subtilis
pdb|3ERW|D Chain D, Crystal Structure Of Stoa From Bacillus Subtilis
pdb|3ERW|E Chain E, Crystal Structure Of Stoa From Bacillus Subtilis
pdb|3ERW|F Chain F, Crystal Structure Of Stoa From Bacillus Subtilis
pdb|3ERW|G Chain G, Crystal Structure Of Stoa From Bacillus Subtilis
Length = 145
Score = 31.6 bits (70), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 23/71 (32%), Positives = 34/71 (47%), Gaps = 10/71 (14%)
Query: 45 VIVNFHAEWCEPCHLLTPQLKKMLGN--SDSIDLAIIDV---EKNAELVHTFEVKA---- 95
I++F WC PC PQ + SDS+ L +++ E+N ++V F +KA
Sbjct: 37 TILHFWTSWCPPCKKELPQFQSFYDAHPSDSVKLVTVNLVNSEQNQQVVEDF-IKANKLT 95
Query: 96 VPAVLAVKNGL 106
P VL K L
Sbjct: 96 FPIVLDSKGEL 106
>pdb|3APQ|A Chain A, Crystal Structure Of J-Trx1 Fragment Of Erdj5
pdb|3APQ|B Chain B, Crystal Structure Of J-Trx1 Fragment Of Erdj5
Length = 210
Score = 31.6 bits (70), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 15/69 (21%), Positives = 31/69 (44%), Gaps = 1/69 (1%)
Query: 46 IVNFHAEWCEPCHLLTPQLKKMLGNSDS-IDLAIIDVEKNAELVHTFEVKAVPAVLAVKN 104
VNF++ C CH L P ++ D + + ++ + L V + P++ ++
Sbjct: 118 FVNFYSPGCSHCHDLAPTWREFAKEVDGLLRIGAVNCGDDRMLCRMKGVNSYPSLFIFRS 177
Query: 105 GLVIDKFIG 113
G+ K+ G
Sbjct: 178 GMAAVKYNG 186
>pdb|2H1B|A Chain A, Resa E80q
pdb|2H1B|B Chain B, Resa E80q
pdb|2H1B|C Chain C, Resa E80q
pdb|2H1B|D Chain D, Resa E80q
Length = 143
Score = 31.2 bits (69), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 14/49 (28%), Positives = 24/49 (48%), Gaps = 2/49 (4%)
Query: 45 VIVNFHAEWCEPCHLLTPQLKKMLGN--SDSIDLAIIDVEKNAELVHTF 91
V +NF WCEPC P + + S +++ ++V ++ VH F
Sbjct: 29 VFLNFWGTWCEPCKKQFPYMANQYKHFKSQGVEIVAVNVGESKIAVHNF 77
>pdb|1QK8|A Chain A, Tryparedoxin-I From Crithidia Fasciculata
pdb|1O7U|A Chain A, Radiation Induced Tryparedoxin-I
pdb|1O85|A Chain A, Radiation-Reduced Tryparedoxin-I
pdb|1O8W|A Chain A, Radiation-Reduced Tryparedoxin-I
Length = 146
Score = 31.2 bits (69), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 11/20 (55%), Positives = 11/20 (55%)
Query: 45 VIVNFHAEWCEPCHLLTPQL 64
V F A WC PC TPQL
Sbjct: 31 VFFYFSASWCPPCRGFTPQL 50
>pdb|1EWX|A Chain A, Crystal Structure Of Native Tryparedoxin I From
Crithidia Fasciculata
Length = 146
Score = 31.2 bits (69), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 11/20 (55%), Positives = 11/20 (55%)
Query: 45 VIVNFHAEWCEPCHLLTPQL 64
V F A WC PC TPQL
Sbjct: 31 VFFYFSASWCPPCRGFTPQL 50
>pdb|1OKD|A Chain A, Nmr-Structure Of Tryparedoxin 1
Length = 154
Score = 31.2 bits (69), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 11/20 (55%), Positives = 11/20 (55%)
Query: 45 VIVNFHAEWCEPCHLLTPQL 64
V F A WC PC TPQL
Sbjct: 31 VFFYFSASWCPPCRGFTPQL 50
>pdb|1EZK|A Chain A, Crystal Structure Of Recombinant Tryparedoxin I
Length = 153
Score = 31.2 bits (69), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 11/20 (55%), Positives = 11/20 (55%)
Query: 45 VIVNFHAEWCEPCHLLTPQL 64
V F A WC PC TPQL
Sbjct: 30 VFFYFSASWCPPCRGFTPQL 49
>pdb|1ST9|A Chain A, Crystal Structure Of A Soluble Domain Of Resa In The
Oxidised Form
pdb|1ST9|B Chain B, Crystal Structure Of A Soluble Domain Of Resa In The
Oxidised Form
pdb|1SU9|A Chain A, Reduced Structure Of The Soluble Domain Of Resa
pdb|1SU9|B Chain B, Reduced Structure Of The Soluble Domain Of Resa
pdb|2H1D|A Chain A, Resa Ph 9.25
pdb|2H1D|B Chain B, Resa Ph 9.25
Length = 143
Score = 30.8 bits (68), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 14/49 (28%), Positives = 24/49 (48%), Gaps = 2/49 (4%)
Query: 45 VIVNFHAEWCEPCHLLTPQLKKMLGN--SDSIDLAIIDVEKNAELVHTF 91
V +NF WCEPC P + + S +++ ++V ++ VH F
Sbjct: 29 VFLNFWGTWCEPCKKEFPYMANQYKHFKSQGVEIVAVNVGESKIAVHNF 77
>pdb|3S9F|A Chain A, The Structure Of Tryparedoxin I From Leishmania Major
Length = 165
Score = 30.8 bits (68), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 11/20 (55%), Positives = 11/20 (55%)
Query: 45 VIVNFHAEWCEPCHLLTPQL 64
V F A WC PC TPQL
Sbjct: 51 VFFYFSASWCPPCRGFTPQL 70
>pdb|2ALB|A Chain A, Nmr Structure Of The N-Terminal Domain A Of The
Glycoprotein Chaperone Erp57
Length = 113
Score = 30.8 bits (68), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 17/70 (24%), Positives = 28/70 (40%), Gaps = 1/70 (1%)
Query: 45 VIVNFHAEWCEPCHLLTPQLKKMLGNSDSI-DLAIIDVEKNAELVHTFEVKAVPAVLAVK 103
++V F A WC C L P+ + I LA +D N + + V P + +
Sbjct: 24 MLVEFFAPWCGHCKRLAPEYEAAATRLKGIVPLAKVDCTANTNTCNKYGVSGYPTLKIFR 83
Query: 104 NGLVIDKFIG 113
+G + G
Sbjct: 84 DGEEAGAYDG 93
>pdb|3KCM|A Chain A, The Crystal Structure Of Thioredoxin Protein From
Geobacter Metallireducens
pdb|3KCM|B Chain B, The Crystal Structure Of Thioredoxin Protein From
Geobacter Metallireducens
pdb|3KCM|C Chain C, The Crystal Structure Of Thioredoxin Protein From
Geobacter Metallireducens
pdb|3KCM|D Chain D, The Crystal Structure Of Thioredoxin Protein From
Geobacter Metallireducens
pdb|3KCM|E Chain E, The Crystal Structure Of Thioredoxin Protein From
Geobacter Metallireducens
pdb|3KCM|F Chain F, The Crystal Structure Of Thioredoxin Protein From
Geobacter Metallireducens
Length = 154
Score = 30.0 bits (66), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 11/23 (47%), Positives = 13/23 (56%)
Query: 45 VIVNFHAEWCEPCHLLTPQLKKM 67
VIVNF A WC PC P ++
Sbjct: 31 VIVNFWATWCPPCREEIPSXXRL 53
>pdb|1GH2|A Chain A, Crystal Structure Of The Catalytic Domain Of A New Human
Thioredoxin-Like Protein
Length = 107
Score = 30.0 bits (66), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 16/69 (23%), Positives = 25/69 (36%)
Query: 45 VIVNFHAEWCEPCHLLTPQLKKMLGNSDSIDLAIIDVEKNAELVHTFEVKAVPAVLAVKN 104
+V F C PC + P M +DV + T + A P +N
Sbjct: 24 AVVKFTMRGCGPCLRIAPAFSSMSNKYPQAVFLEVDVHQCQGTAATNNISATPTFQFFRN 83
Query: 105 GLVIDKFIG 113
+ ID++ G
Sbjct: 84 KVRIDQYQG 92
>pdb|3OR5|A Chain A, Crystal Structure Of Thiol:disulfide Interchange
Protein, Thioredoxin Family Protein From Chlorobium
Tepidum Tls
Length = 165
Score = 29.6 bits (65), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 13/42 (30%), Positives = 18/42 (42%)
Query: 46 IVNFHAEWCEPCHLLTPQLKKMLGNSDSIDLAIIDVEKNAEL 87
IVNF A WC PC P ++ S + + N +L
Sbjct: 38 IVNFFATWCPPCRSEIPDXVQVQKTWASRGFTFVGIAVNEQL 79
>pdb|2F9S|A Chain A, 2nd Crystal Structure Of A Soluble Domain Of Resa In The
Oxidised Form
pdb|2F9S|B Chain B, 2nd Crystal Structure Of A Soluble Domain Of Resa In The
Oxidised Form
Length = 151
Score = 29.6 bits (65), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 14/49 (28%), Positives = 23/49 (46%), Gaps = 2/49 (4%)
Query: 45 VIVNFHAEWCEPCHLLTPQLKKMLGN--SDSIDLAIIDVEKNAELVHTF 91
V +NF WCEPC P + S +++ ++V ++ VH F
Sbjct: 29 VFLNFWGTWCEPCKKEFPYXANQYKHFKSQGVEIVAVNVGESKIAVHNF 77
>pdb|2LUS|A Chain A, Nmr Structure Of Carcinoscorpius Rotundicauda
Thioredoxin Related Protein 16 And Its Role In
Regulating Transcription Factor Nf-Kb Activity
Length = 143
Score = 29.3 bits (64), Expect = 0.64, Method: Compositional matrix adjust.
Identities = 15/38 (39%), Positives = 16/38 (42%), Gaps = 2/38 (5%)
Query: 49 FHAEWCEPCHLLTPQLKKMLGN--SDSIDLAIIDVEKN 84
F A WC PC TP L M DS II V +
Sbjct: 33 FSAHWCPPCRGFTPILADMYSELVDDSAPFEIIFVSSD 70
>pdb|2DJJ|A Chain A, Solution Structure Of The A' Domain Of Thermophilic
Fungal Protein Disulfide Isomerase
pdb|2KP1|A Chain A, Solution Structure Of The A' Domain Of Thermophilic
Fungal Protein Disulfide Isomerase
Length = 121
Score = 29.3 bits (64), Expect = 0.66, Method: Compositional matrix adjust.
Identities = 9/30 (30%), Positives = 19/30 (63%)
Query: 38 VMNNPVPVIVNFHAEWCEPCHLLTPQLKKM 67
V+++ V++ F+A WC C L P+ +++
Sbjct: 21 VLDDTKDVLIEFYAPWCGHCKALAPKYEEL 50
>pdb|1I5G|A Chain A, Tryparedoxin Ii Complexed With Glutathionylspermidine
Length = 144
Score = 29.3 bits (64), Expect = 0.67, Method: Compositional matrix adjust.
Identities = 20/86 (23%), Positives = 33/86 (38%), Gaps = 27/86 (31%)
Query: 45 VIVNFHAEWCEPCHLLTPQL---KKMLGNSDSIDLAIIDVEKNAE--------------- 86
V F A WC P TPQL K + ++ +I +++AE
Sbjct: 31 VFFYFSASWCPPSRAFTPQLIDFYKAHAEKKNFEVMLISWDESAEDFKDYYAKMPWLALP 90
Query: 87 ---------LVHTFEVKAVPAVLAVK 103
L F+VK++P ++ V+
Sbjct: 91 FEDRKGMEFLTTGFDVKSIPTLVGVE 116
>pdb|3K8N|A Chain A, Crystal Structure Of E. Coli Ccmg
Length = 185
Score = 29.3 bits (64), Expect = 0.70, Method: Compositional matrix adjust.
Identities = 13/38 (34%), Positives = 20/38 (52%), Gaps = 1/38 (2%)
Query: 22 KFKSYIIENNEQFIK-HVMNNPVPVIVNFHAEWCEPCH 58
KF+ ++N QF + V+ PV++N A WC C
Sbjct: 47 KFRLESLDNPGQFYQADVLTQGKPVLLNVWATWCPTCR 84
>pdb|3HDC|A Chain A, The Crystal Structure Of Thioredoxin Protein From
Geobacter Metallireducens
Length = 158
Score = 29.3 bits (64), Expect = 0.75, Method: Compositional matrix adjust.
Identities = 12/37 (32%), Positives = 19/37 (51%)
Query: 45 VIVNFHAEWCEPCHLLTPQLKKMLGNSDSIDLAIIDV 81
V+VNF A WC C P +++ + DL ++ V
Sbjct: 44 VLVNFWASWCPYCRDEXPSXDRLVKSFPKGDLVVLAV 80
>pdb|2G0F|A Chain A, Crystal Structure Of P144a Mutant Of E.Coli Ccmg Protein
Length = 168
Score = 29.3 bits (64), Expect = 0.78, Method: Compositional matrix adjust.
Identities = 13/38 (34%), Positives = 20/38 (52%), Gaps = 1/38 (2%)
Query: 22 KFKSYIIENNEQFIK-HVMNNPVPVIVNFHAEWCEPCH 58
KF+ ++N QF + V+ PV++N A WC C
Sbjct: 30 KFRLESLDNPGQFYQADVLTQGKPVLLNVWATWCPTCR 67
>pdb|2B1K|A Chain A, Crystal Structure Of E. Coli Ccmg Protein
Length = 168
Score = 28.9 bits (63), Expect = 0.84, Method: Compositional matrix adjust.
Identities = 13/38 (34%), Positives = 20/38 (52%), Gaps = 1/38 (2%)
Query: 22 KFKSYIIENNEQFIK-HVMNNPVPVIVNFHAEWCEPCH 58
KF+ ++N QF + V+ PV++N A WC C
Sbjct: 30 KFRLESLDNPGQFYQADVLTQGKPVLLNVWATWCPTCR 67
>pdb|3RAZ|A Chain A, The Crystal Structure Of Thioredoxin-Related Protein
From Neisseria Meningitidis Serogroup B
Length = 151
Score = 28.9 bits (63), Expect = 0.86, Method: Compositional matrix adjust.
Identities = 13/38 (34%), Positives = 17/38 (44%), Gaps = 5/38 (13%)
Query: 46 IVNFHAEWCEPCHLLTPQLKKML-----GNSDSIDLAI 78
IVN A WC PC P K G+ D + +A+
Sbjct: 28 IVNLWATWCGPCRKEXPAXSKWYKAQKKGSVDXVGIAL 65
>pdb|3UEM|A Chain A, Crystal Structure Of Human Pdi Bb'a' Domains
Length = 361
Score = 28.9 bits (63), Expect = 0.90, Method: Compositional matrix adjust.
Identities = 18/57 (31%), Positives = 27/57 (47%), Gaps = 3/57 (5%)
Query: 45 VIVNFHAEWCEPCHLLTPQLKKMLGNS--DSIDLAIIDVEKNAELVHTFEVKAVPAV 99
V V F+A WC C L P K LG + D ++ I ++ A V +V + P +
Sbjct: 270 VFVEFYAPWCGHCKQLAPIWDK-LGETYKDHENIVIAKMDSTANEVEAVKVHSFPTL 325
>pdb|1O73|A Chain A, Tryparedoxin From Trypanosoma Brucei
Length = 144
Score = 28.9 bits (63), Expect = 0.93, Method: Compositional matrix adjust.
Identities = 14/53 (26%), Positives = 24/53 (45%), Gaps = 3/53 (5%)
Query: 45 VIVNFHAEWCEPCHLLTPQLKKMLGN---SDSIDLAIIDVEKNAELVHTFEVK 94
V + F A WC PC TP L + + + ++ +I ++N H + K
Sbjct: 31 VFLYFSASWCPPCRGFTPVLAEFYEKHHVAKNFEVVLISWDENESDFHDYYGK 83
>pdb|3APO|A Chain A, Crystal Structure Of Full-Length Erdj5
Length = 780
Score = 28.9 bits (63), Expect = 0.95, Method: Composition-based stats.
Identities = 22/88 (25%), Positives = 39/88 (44%), Gaps = 8/88 (9%)
Query: 44 PVIVNFHAEWCEPCHLLTPQLKK----MLGNSDSIDLAIIDVEKNAELVHTFEVKAVPAV 99
P +V+F A W P L P+L+K + G + + +D + L + + ++A P
Sbjct: 457 PWLVDFFAPWSPPSRALLPELRKASTLLYGQ---LKVGTLDCTIHEGLCNMYNIQAYPTT 513
Query: 100 LAVKNGLVIDKFIGLIENEMIENMVSKL 127
+ V N I ++ G E I + L
Sbjct: 514 V-VFNQSSIHEYEGHHSAEQILEFIEDL 540
>pdb|1X5C|A Chain A, The Solution Structure Of The Second Thioredoxin-Like
Domain Of Human Protein Disulfide-Isomerase
Length = 121
Score = 28.9 bits (63), Expect = 0.97, Method: Compositional matrix adjust.
Identities = 18/57 (31%), Positives = 27/57 (47%), Gaps = 3/57 (5%)
Query: 45 VIVNFHAEWCEPCHLLTPQLKKMLGNS--DSIDLAIIDVEKNAELVHTFEVKAVPAV 99
V V F+A WC C L P K LG + D ++ I ++ A V +V + P +
Sbjct: 28 VFVEFYAPWCGHCKQLAPIWDK-LGETYKDHENIVIAKMDSTANEVEAVKVHSFPTL 83
>pdb|1JFU|A Chain A, Crystal Structure Of The Soluble Domain Of Tlpa From
Bradyrhizobium Japonicum
pdb|1JFU|B Chain B, Crystal Structure Of The Soluble Domain Of Tlpa From
Bradyrhizobium Japonicum
Length = 186
Score = 28.1 bits (61), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 10/25 (40%), Positives = 14/25 (56%)
Query: 45 VIVNFHAEWCEPCHLLTPQLKKMLG 69
++VN A WC PC P L ++ G
Sbjct: 63 LLVNLWATWCVPCRKEMPALDELQG 87
>pdb|2B5E|A Chain A, Crystal Structure Of Yeast Protein Disulfide Isomerase
pdb|3BOA|A Chain A, Crystal Structure Of Yeast Protein Disulfide Isomerase
Length = 504
Score = 27.7 bits (60), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 18/72 (25%), Positives = 33/72 (45%), Gaps = 5/72 (6%)
Query: 38 VMNNPV-PVIVNFHAEWCEPCHLLTP---QLKKMLGNSDSIDLAIIDVEKNAELVHTFEV 93
++N+P V+V ++A WC C L P +L N+ S D+ I ++ V +
Sbjct: 371 IVNDPKKDVLVLYYAPWCGHCKRLAPTYQELADTYANATS-DVLIAKLDHTENDVRGVVI 429
Query: 94 KAVPAVLAVKNG 105
+ P ++ G
Sbjct: 430 EGYPTIVLYPGG 441
>pdb|2H19|A Chain A, Crystal Structure Of Resa Cys77ala Variant
pdb|2H19|B Chain B, Crystal Structure Of Resa Cys77ala Variant
Length = 143
Score = 27.7 bits (60), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 13/49 (26%), Positives = 23/49 (46%), Gaps = 2/49 (4%)
Query: 45 VIVNFHAEWCEPCHLLTPQLKKMLGN--SDSIDLAIIDVEKNAELVHTF 91
V +NF WCEP P + + S +++ ++V ++ VH F
Sbjct: 29 VFLNFWGTWCEPAKKEFPYMANQYKHFKSQGVEIVAVNVGESKIAVHNF 77
>pdb|2H1A|A Chain A, Resa C74a Variant
pdb|2H1A|B Chain B, Resa C74a Variant
Length = 143
Score = 27.7 bits (60), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 13/49 (26%), Positives = 23/49 (46%), Gaps = 2/49 (4%)
Query: 45 VIVNFHAEWCEPCHLLTPQLKKMLGN--SDSIDLAIIDVEKNAELVHTF 91
V +NF W EPC P + + S +++ ++V ++ VH F
Sbjct: 29 VFLNFWGTWAEPCKKEFPYMANQYKHFKSQGVEIVAVNVGESKIAVHNF 77
>pdb|2L57|A Chain A, Solution Structure Of An Uncharacterized Thioredoin-Like
Protein From Clostridium Perfringens
Length = 126
Score = 27.7 bits (60), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 25/96 (26%), Positives = 44/96 (45%), Gaps = 10/96 (10%)
Query: 43 VPVIVNFHAEWCEPCHLLTPQLKKMLGNSDS---IDLAIIDVEKNAELVHTFEVKAVP-A 98
+P I+ F + C C + +L + + I A ++ EKN +L + ++ VP
Sbjct: 27 IPTIIMFKTDTCPYCVEMQKELSYVSKEREGKFNIYYARLEEEKNIDLAYKYDANIVPTT 86
Query: 99 VLAVKNGLVIDKFI---GLIENEMIENMVSKLLPKD 131
V K G +KF GL+ IE +++ L K+
Sbjct: 87 VFLDKEG---NKFYVHQGLMRKNNIETILNSLGVKE 119
>pdb|4FHR|A Chain A, Crystal Structure Of The Complex Between The Flagellar
Motor Proteins Flig And Flim
Length = 187
Score = 27.3 bits (59), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 15/49 (30%), Positives = 23/49 (46%), Gaps = 9/49 (18%)
Query: 28 IENNEQFIKHVMNNPVPVIVNFHAEW---------CEPCHLLTPQLKKM 67
+E N QF++ V N + ++V W C P LL P L+K+
Sbjct: 136 VETNPQFVQIVPPNEIVLLVTASVSWGEFTSFINVCWPFSLLEPLLEKL 184
>pdb|3SOH|A Chain A, Architecture Of The Flagellar Rotor
pdb|3SOH|C Chain C, Architecture Of The Flagellar Rotor
Length = 188
Score = 26.9 bits (58), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 15/49 (30%), Positives = 23/49 (46%), Gaps = 9/49 (18%)
Query: 28 IENNEQFIKHVMNNPVPVIVNFHAEW---------CEPCHLLTPQLKKM 67
+E N QF++ V N + ++V W C P LL P L+K+
Sbjct: 134 VETNPQFVQIVPPNEIVLLVTASVSWGEFTSFINVCWPFSLLEPLLEKL 182
>pdb|3C73|A Chain A, Structure Of Cehc Variant Resa
pdb|3C73|B Chain B, Structure Of Cehc Variant Resa
Length = 140
Score = 26.9 bits (58), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 13/49 (26%), Positives = 23/49 (46%), Gaps = 2/49 (4%)
Query: 45 VIVNFHAEWCEPCHLLTPQLKKMLGN--SDSIDLAIIDVEKNAELVHTF 91
V +NF WCE C P + + S +++ ++V ++ VH F
Sbjct: 26 VFLNFWGTWCEHCKKEFPYMANQYKHFKSQGVEIVAVNVGESKIAVHNF 74
>pdb|1UC7|A Chain A, Crystal Structure Of Dsbdgamma
pdb|1UC7|B Chain B, Crystal Structure Of Dsbdgamma
Length = 125
Score = 26.9 bits (58), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 10/34 (29%), Positives = 19/34 (55%), Gaps = 6/34 (17%)
Query: 44 PVIVNFHAEWCEPCH------LLTPQLKKMLGNS 71
PV+++ +A+WC C PQ++K L ++
Sbjct: 30 PVMLDLYADWCVACKEFEKYTFSDPQVQKALADT 63
>pdb|2FWE|A Chain A, Crystal Structure Of The C-Terminal Domain Of The
Electron Transfer Catalyst Dsbd (Oxidized Form)
pdb|2FWF|A Chain A, High Resolution Crystal Structure Of The C-Terminal
Domain Of The Electron Transfer Catalyst Dsbd (Reduced
Form)
pdb|2FWG|A Chain A, High Resolution Crystal Structure Of The C-Terminal
Domain Of The Electron Transfer Catalyst Dsbd
(Photoreduced Form)
pdb|2FWH|A Chain A, Atomic Resolution Crystal Structure Of The C-Terminal
Domain Of The Electron Transfer Catalyst Dsbd (Reduced
Form At Ph7)
Length = 134
Score = 26.9 bits (58), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 10/34 (29%), Positives = 19/34 (55%), Gaps = 6/34 (17%)
Query: 44 PVIVNFHAEWCEPCH------LLTPQLKKMLGNS 71
PV+++ +A+WC C PQ++K L ++
Sbjct: 33 PVMLDLYADWCVACKEFEKYTFSDPQVQKALADT 66
>pdb|2EA7|A Chain A, Crystal Structure Of Adzuki Bean 7s Globulin-1
pdb|2EA7|B Chain B, Crystal Structure Of Adzuki Bean 7s Globulin-1
pdb|2EA7|C Chain C, Crystal Structure Of Adzuki Bean 7s Globulin-1
Length = 434
Score = 26.9 bits (58), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 17/76 (22%), Positives = 35/76 (46%), Gaps = 6/76 (7%)
Query: 39 MNNPVPVIVNFHAEWCEPCHLLTPQLKKMLGNSDSIDLAIIDVEKNAELVHTFEVKAVPA 98
+ N P+ N W E PQLK + + ++ +D+++ A L+ + KA+
Sbjct: 236 LRNSKPIYSNKFGRWYEMTPEKNPQLKDL-----DVFISSVDMKEGALLLPHYSSKAI-V 289
Query: 99 VLAVKNGLVIDKFIGL 114
++ + G + +GL
Sbjct: 290 IMVINEGEAKIELVGL 305
>pdb|2EAA|A Chain A, Crystal Structure Of Adzuki Bean 7s Globulin-3
pdb|2EAA|B Chain B, Crystal Structure Of Adzuki Bean 7s Globulin-3
pdb|2EAA|C Chain C, Crystal Structure Of Adzuki Bean 7s Globulin-3
Length = 433
Score = 26.6 bits (57), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 17/76 (22%), Positives = 35/76 (46%), Gaps = 6/76 (7%)
Query: 39 MNNPVPVIVNFHAEWCEPCHLLTPQLKKMLGNSDSIDLAIIDVEKNAELVHTFEVKAVPA 98
+ N P+ N W E PQLK + + ++ +D+++ A L+ + KA+
Sbjct: 235 LRNSKPIYSNKFGRWYEMTPEKNPQLKDL-----DVFISSVDMKEGALLLPHYNSKAI-V 288
Query: 99 VLAVKNGLVIDKFIGL 114
++ + G + +GL
Sbjct: 289 IMVINEGEAKIELVGL 304
>pdb|3KH7|A Chain A, Crystal Structure Of The Periplasmic Soluble Domain Of
Reduced Ccmg From Pseudomonas Aeruginosa
pdb|3KH9|A Chain A, Crystal Structure Of The Periplasmic Soluble Domain Of
Oxidized Ccmg From Pseudomonas Aeruginosa
Length = 176
Score = 26.6 bits (57), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 8/24 (33%), Positives = 13/24 (54%)
Query: 44 PVIVNFHAEWCEPCHLLTPQLKKM 67
P +VN WC C + P+L ++
Sbjct: 60 PALVNVWGTWCPSCRVEHPELTRL 83
>pdb|2HP7|A Chain A, Structure Of Flim Provides Insight Into Assembly Of The
Switch Complex In The Bacterial Flagella Motor
Length = 183
Score = 26.2 bits (56), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 15/48 (31%), Positives = 22/48 (45%), Gaps = 9/48 (18%)
Query: 28 IENNEQFIKHVMNNPVPVIVNFHAEW---------CEPCHLLTPQLKK 66
+E N QF++ V N + ++V W C P LL P L+K
Sbjct: 136 VETNPQFVQIVPPNEIVLLVTASVSWGEFTSFINVCWPFSLLEPLLEK 183
>pdb|3CMQ|A Chain A, Crystal Structure Of Human Mitochondrial Phenylalanine
Trna Synthetase
pdb|3HFV|A Chain A, Crystal Structure Of Human Mitochondrial Phenylalanyl-Trna
Synthetase Complexed With M-Tyrosine
pdb|3TEG|A Chain A, Bacterial And Eukaryotic Phenylalanyl-Trna Synthetases
Catalyze Misaminoacylation Of Trnaphe With
3,4-Dihydroxy-L-Phenylalanine (L- Dopa)
pdb|3TUP|A Chain A, Crystal Structure Of Human Mitochondrial Phers Complexed
With Trnaphe In The Active Open State
Length = 415
Score = 25.8 bits (55), Expect = 6.7, Method: Composition-based stats.
Identities = 13/33 (39%), Positives = 16/33 (48%), Gaps = 2/33 (6%)
Query: 47 VNFHAEWCE--PCHLLTPQLKKMLGNSDSIDLA 77
+NFH EW E C ++ QL G D I A
Sbjct: 243 INFHGEWLEVLGCGVMEQQLVNSAGAQDRIGWA 275
>pdb|2DBC|A Chain A, Solution Structure Of The Thioredoxin-Like Domain Of
Phosducin-Like Protein 2(Pdcl2)
Length = 135
Score = 25.8 bits (55), Expect = 6.9, Method: Compositional matrix adjust.
Identities = 10/22 (45%), Positives = 14/22 (63%)
Query: 95 AVPAVLAVKNGLVIDKFIGLIE 116
+P + KNG + KFIG+IE
Sbjct: 80 CLPTIFVYKNGQIEGKFIGIIE 101
>pdb|3O4F|A Chain A, Crystal Structure Of Spermidine Synthase From E. Coli
pdb|3O4F|B Chain B, Crystal Structure Of Spermidine Synthase From E. Coli
pdb|3O4F|C Chain C, Crystal Structure Of Spermidine Synthase From E. Coli
pdb|3O4F|D Chain D, Crystal Structure Of Spermidine Synthase From E. Coli
pdb|3O4F|E Chain E, Crystal Structure Of Spermidine Synthase From E. Coli
pdb|3O4F|F Chain F, Crystal Structure Of Spermidine Synthase From E. Coli
pdb|3O4F|G Chain G, Crystal Structure Of Spermidine Synthase From E. Coli
pdb|3O4F|H Chain H, Crystal Structure Of Spermidine Synthase From E. Coli
Length = 294
Score = 25.8 bits (55), Expect = 7.6, Method: Compositional matrix adjust.
Identities = 18/64 (28%), Positives = 30/64 (46%), Gaps = 11/64 (17%)
Query: 32 EQFIKHVMNNPVPVIVNFHAEWCEPCHLLTPQLKKMLGNSDSIDLAIIDVEKNAELVHTF 91
++FI H M VP++ + HA+ H+L ++G D L + KN E +
Sbjct: 65 DEFIYHEMMTHVPLLAHGHAK-----HVL------IIGGGDGAMLREVTRHKNVESITMV 113
Query: 92 EVKA 95
E+ A
Sbjct: 114 EIDA 117
>pdb|3EVI|A Chain A, Crystal Structure Of The Thioredoxin-Fold Domain Of Human
Phosducin- Like Protein 2
pdb|3EVI|B Chain B, Crystal Structure Of The Thioredoxin-Fold Domain Of Human
Phosducin- Like Protein 2
Length = 118
Score = 25.4 bits (54), Expect = 9.6, Method: Compositional matrix adjust.
Identities = 10/22 (45%), Positives = 14/22 (63%)
Query: 95 AVPAVLAVKNGLVIDKFIGLIE 116
+P + KNG + KFIG+IE
Sbjct: 73 CLPTIFVYKNGQIEAKFIGIIE 94
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.322 0.137 0.404
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 3,805,961
Number of Sequences: 62578
Number of extensions: 145544
Number of successful extensions: 533
Number of sequences better than 100.0: 189
Number of HSP's better than 100.0 without gapping: 160
Number of HSP's successfully gapped in prelim test: 29
Number of HSP's that attempted gapping in prelim test: 325
Number of HSP's gapped (non-prelim): 193
length of query: 135
length of database: 14,973,337
effective HSP length: 88
effective length of query: 47
effective length of database: 9,466,473
effective search space: 444924231
effective search space used: 444924231
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 46 (22.3 bits)