BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy6819
(135 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|P97615|THIOM_RAT Thioredoxin, mitochondrial OS=Rattus norvegicus GN=Txn2 PE=2 SV=1
Length = 166
Score = 95.5 bits (236), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 40/105 (38%), Positives = 71/105 (67%), Gaps = 1/105 (0%)
Query: 25 SYIIENNEQFIKHVMNNPVPVIVNFHAEWCEPCHLLTPQLKKMLGNS-DSIDLAIIDVEK 83
++ +++ F V+N+ PV+V+FHA+WC PC +L P+L+KM+ + +A +D++
Sbjct: 61 TFNVQDGPDFQDRVVNSETPVVVDFHAQWCGPCKILGPRLEKMVAKQHGKVVMAKVDIDD 120
Query: 84 NAELVHTFEVKAVPAVLAVKNGLVIDKFIGLIENEMIENMVSKLL 128
+ +L +EV AVP VLA+KNG V+DKF+G+ + + +E + KL+
Sbjct: 121 HTDLAIEYEVSAVPTVLAIKNGDVVDKFVGIKDEDQLEAFLKKLI 165
>sp|Q99757|THIOM_HUMAN Thioredoxin, mitochondrial OS=Homo sapiens GN=TXN2 PE=1 SV=2
Length = 166
Score = 95.1 bits (235), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 41/107 (38%), Positives = 71/107 (66%), Gaps = 1/107 (0%)
Query: 23 FKSYIIENNEQFIKHVMNNPVPVIVNFHAEWCEPCHLLTPQLKKMLGNS-DSIDLAIIDV 81
++ I++ F V+N+ PV+V+FHA+WC PC +L P+L+KM+ + +A +D+
Sbjct: 59 LTTFNIQDGPDFQDRVVNSETPVVVDFHAQWCGPCKILGPRLEKMVAKQHGKVVMAKVDI 118
Query: 82 EKNAELVHTFEVKAVPAVLAVKNGLVIDKFIGLIENEMIENMVSKLL 128
+ + +L +EV AVP VLA+KNG V+DKF+G+ + + +E + KL+
Sbjct: 119 DDHTDLAIEYEVSAVPTVLAMKNGDVVDKFVGIKDEDQLEAFLKKLI 165
>sp|P97493|THIOM_MOUSE Thioredoxin, mitochondrial OS=Mus musculus GN=Txn2 PE=2 SV=1
Length = 166
Score = 95.1 bits (235), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 40/107 (37%), Positives = 71/107 (66%), Gaps = 1/107 (0%)
Query: 23 FKSYIIENNEQFIKHVMNNPVPVIVNFHAEWCEPCHLLTPQLKKMLGNS-DSIDLAIIDV 81
++ +++ F V+N+ PV+V+FHA+WC PC +L P+L+KM+ + +A +D+
Sbjct: 59 LTTFNVQDGPDFQDRVVNSETPVVVDFHAQWCGPCKILGPRLEKMVAKQHGKVVMAKVDI 118
Query: 82 EKNAELVHTFEVKAVPAVLAVKNGLVIDKFIGLIENEMIENMVSKLL 128
+ + +L +EV AVP VLA+KNG V+DKF+G+ + + +E + KL+
Sbjct: 119 DDHTDLAIEYEVSAVPTVLAIKNGDVVDKFVGIKDEDQLEAFLKKLI 165
>sp|Q95108|THIOM_BOVIN Thioredoxin, mitochondrial OS=Bos taurus GN=TXN2 PE=1 SV=2
Length = 166
Score = 94.0 bits (232), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 40/105 (38%), Positives = 71/105 (67%), Gaps = 1/105 (0%)
Query: 25 SYIIENNEQFIKHVMNNPVPVIVNFHAEWCEPCHLLTPQLKKMLGNS-DSIDLAIIDVEK 83
++ I++ F V+N+ PV+V+FHA+WC PC +L P+L+K++ + +A +D++
Sbjct: 61 TFNIQDGPDFQDRVVNSETPVVVDFHAQWCGPCKILGPRLEKVVAKQHGKVVMAKVDIDD 120
Query: 84 NAELVHTFEVKAVPAVLAVKNGLVIDKFIGLIENEMIENMVSKLL 128
+ +L +EV AVP VLA+KNG V+DKF+G+ + + +E + KL+
Sbjct: 121 HTDLALEYEVSAVPTVLAMKNGDVVDKFVGIKDEDQLEAFLKKLI 165
>sp|Q17424|THIO2_CAEEL Probable thioredoxin-2 OS=Caenorhabditis elegans GN=trx-2 PE=3 SV=2
Length = 145
Score = 89.0 bits (219), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 42/104 (40%), Positives = 66/104 (63%), Gaps = 1/104 (0%)
Query: 26 YIIENNEQFIKHVMNNPVPVIVNFHAEWCEPCHLLTPQL-KKMLGNSDSIDLAIIDVEKN 84
+ I++ E F + V+ + VPVIV+FHAEWC PC L P+L +K+ G S+ LA I+V+
Sbjct: 40 FDIDSVEDFTEKVIQSSVPVIVDFHAEWCGPCQALGPRLEEKVNGRQGSVLLAKINVDHA 99
Query: 85 AELVHTFEVKAVPAVLAVKNGLVIDKFIGLIENEMIENMVSKLL 128
EL + + AVP V A KNG I F G++++E +++ + +L
Sbjct: 100 GELAMDYGISAVPTVFAFKNGEKISGFSGVLDDEQLDDFIEDVL 143
>sp|Q9Z7P5|THIO_CHLPN Thioredoxin OS=Chlamydia pneumoniae GN=trxA PE=3 SV=1
Length = 102
Score = 66.2 bits (160), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 30/98 (30%), Positives = 59/98 (60%), Gaps = 5/98 (5%)
Query: 29 ENNEQFIKHVMNNPVPVIVNFHAEWCEPCHLLTPQLKKMLGNSDSIDLAIIDVEKNAELV 88
EN + FI + V+V+F AEWC PC +LTP L+ + + + I++++N++
Sbjct: 8 ENFDSFIASGL-----VLVDFFAEWCGPCRMLTPILENLAAELPHVTIGKINIDENSKPA 62
Query: 89 HTFEVKAVPAVLAVKNGLVIDKFIGLIENEMIENMVSK 126
T+EV ++P ++ K+G + + +GL + E + N+++K
Sbjct: 63 ETYEVSSIPTLILFKDGNEVARVVGLKDKEFLTNLINK 100
>sp|Q8L7S9|TRXY2_ARATH Thioredoxin Y2, chloroplastic OS=Arabidopsis thaliana GN=At1g43560
PE=1 SV=1
Length = 167
Score = 62.4 bits (150), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 35/127 (27%), Positives = 65/127 (51%), Gaps = 2/127 (1%)
Query: 3 VKQFQSTLFKRCFNHFLERKFKSYIIENNEQFIKHVMNNPVPVIVNFHAEWCEPCHLLTP 62
+++F S F ++ + F + N+ PV+V+F+A WC PC L+ P
Sbjct: 37 IRRFGSVQSPSSSTRFAPLTVRAAKKQTFNSFDDLLQNSDKPVLVDFYATWCGPCQLMVP 96
Query: 63 QLKKMLGN-SDSIDLAIIDVEKNAELVHTFEVKAVPAVLAVKNGLVIDKFIG-LIENEMI 120
L ++ D I + ID EK L + ++++A+P + K+G + D+F G L N+++
Sbjct: 97 ILNEVSETLKDIIAVVKIDTEKYPSLANKYQIEALPTFILFKDGKLWDRFEGALPANQLV 156
Query: 121 ENMVSKL 127
E + + L
Sbjct: 157 ERIENSL 163
>sp|P00275|THIO1_CORNE Thioredoxin C-1 OS=Corynebacterium nephridii PE=1 SV=1
Length = 105
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 26/85 (30%), Positives = 50/85 (58%), Gaps = 1/85 (1%)
Query: 30 NNEQFIKHVMNNPVPVIVNFHAEWCEPCHLLTPQLKKMLGN-SDSIDLAIIDVEKNAELV 88
+N F V+ + PV+V+F AEWC PC ++ P L ++ + + +A +++++N EL
Sbjct: 6 DNSNFQSDVLQSSEPVVVDFWAEWCGPCKMIAPALDEIATEMAGQVKIAKVNIDENPELA 65
Query: 89 HTFEVKAVPAVLAVKNGLVIDKFIG 113
F V+++P +L K+G + +G
Sbjct: 66 AQFGVRSIPTLLMFKDGELAANMVG 90
>sp|P51225|THIO_PORPU Thioredoxin OS=Porphyra purpurea GN=trxA PE=3 SV=1
Length = 107
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 26/100 (26%), Positives = 57/100 (57%), Gaps = 1/100 (1%)
Query: 30 NNEQFIKHVMNNPVPVIVNFHAEWCEPCHLLTPQLKKMLGNSD-SIDLAIIDVEKNAELV 88
+ F + V+NN +PV+V+F A WC PC +++P + + + SI + I+ + N +
Sbjct: 7 TDASFKQEVINNDLPVLVDFWAPWCGPCRMVSPVVDAIAEEYESSIKVVKINTDDNPTIA 66
Query: 89 HTFEVKAVPAVLAVKNGLVIDKFIGLIENEMIENMVSKLL 128
+ ++++P ++ K+G +D IG + +E+ ++K +
Sbjct: 67 AEYGIRSIPTLMIFKSGERVDTVIGAVPKSTLESTLNKYI 106
>sp|Q1RKN1|THIO_RICBR Thioredoxin OS=Rickettsia bellii (strain RML369-C) GN=trxA PE=3
SV=2
Length = 105
Score = 61.6 bits (148), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 29/93 (31%), Positives = 61/93 (65%), Gaps = 2/93 (2%)
Query: 31 NEQFIKHVMNNPVPVIVNFHAEWCEPCHLLTPQLKKMLGNSDS-IDLAIIDVEKNAELVH 89
++ F + V+ + +PV+V+F AEWC PC +LTP ++++ + +S + + +++++N E+
Sbjct: 7 DKSFEEEVLKSDLPVLVDFWAEWCSPCRMLTPIIEEISKDLESKVKVLKMNIDENPEIPS 66
Query: 90 TFEVKAVPAVLAVKNGLVIDKFIGLIE-NEMIE 121
+ ++++P V+ KNG D +GL + N +IE
Sbjct: 67 KYGIRSIPTVMLFKNGEQKDTKVGLHQKNSLIE 99
>sp|Q8KE49|THIO2_CHLTE Thioredoxin-2 OS=Chlorobium tepidum (strain ATCC 49652 / DSM 12025
/ TLS) GN=trx2 PE=3 SV=3
Length = 109
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 25/96 (26%), Positives = 55/96 (57%), Gaps = 1/96 (1%)
Query: 26 YIIENNEQFIKHVMNNPVPVIVNFHAEWCEPCHLLTPQLKKMLGNSDS-IDLAIIDVEKN 84
Y ++ F ++N+ +V+F A WC PC +L P ++++ G+ + +A ++V++N
Sbjct: 5 YFEATDQNFQAEILNSDKVALVDFWAAWCGPCMMLGPVIEELAGDYEGKAIIAKLNVDEN 64
Query: 85 AELVHTFEVKAVPAVLAVKNGLVIDKFIGLIENEMI 120
+ ++++P +L +K G V+D+ +G + MI
Sbjct: 65 PNTAGQYGIRSIPTMLIIKGGKVVDQMVGALPKNMI 100
>sp|P12243|THIO1_SYNE7 Thioredoxin-1 OS=Synechococcus elongatus (strain PCC 7942) GN=trxA
PE=3 SV=2
Length = 107
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 23/100 (23%), Positives = 55/100 (55%), Gaps = 1/100 (1%)
Query: 30 NNEQFIKHVMNNPVPVIVNFHAEWCEPCHLLTPQLKKMLGN-SDSIDLAIIDVEKNAELV 88
+ F + V+ + +PV+V+F A WC PC ++ P + ++ SD + + ++ ++N +
Sbjct: 8 TDATFKQEVLESSIPVLVDFWAPWCGPCRMVAPVVDEIAQQYSDQVKVVKVNTDENPSVA 67
Query: 89 HTFEVKAVPAVLAVKNGLVIDKFIGLIENEMIENMVSKLL 128
+ ++++P ++ K+G +D +G + + N + K L
Sbjct: 68 SQYGIRSIPTLMIFKDGQRVDTVVGAVPKTTLANTLDKHL 107
>sp|Q7M1B9|THIO_CHLAA Thioredoxin OS=Chloroflexus aurantiacus (strain ATCC 29366 / DSM
635 / J-10-fl) GN=trxA PE=1 SV=3
Length = 110
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 24/100 (24%), Positives = 52/100 (52%), Gaps = 1/100 (1%)
Query: 30 NNEQFIKHVMNNPVPVIVNFHAEWCEPCHLLTPQLKKMLGN-SDSIDLAIIDVEKNAELV 88
++ F + V+ + PV+V+F A WC PC ++ P L K+ G + + +A ++ + N +
Sbjct: 8 HDSDFAEKVLKSKTPVVVDFWAPWCGPCRVIAPILDKLAGEYAGRLTIAKVNTDDNVQYA 67
Query: 89 HTFEVKAVPAVLAVKNGLVIDKFIGLIENEMIENMVSKLL 128
++ +P ++ K+G + + +G M + K+L
Sbjct: 68 SQLGIQGIPTLVIFKDGREVGRLVGARPEAMYREIFDKVL 107
>sp|Q6NPF9|TRXY1_ARATH Thioredoxin Y1, chloroplastic OS=Arabidopsis thaliana GN=At1g76760
PE=2 SV=1
Length = 172
Score = 59.7 bits (143), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 32/117 (27%), Positives = 62/117 (52%), Gaps = 7/117 (5%)
Query: 13 RCFNHFLERKFKSYIIENNEQFIKHVMNNPVPVIVNFHAEWCEPCHLLTPQLKKMLGN-S 71
RC +E K +++ + F ++N+ PV+V+++A WC PC + P L ++
Sbjct: 57 RCTPRRIEAKKQTF-----DSFEDLLVNSDKPVLVDYYATWCGPCQFMVPILNEVSETLK 111
Query: 72 DSIDLAIIDVEKNAELVHTFEVKAVPAVLAVKNGLVIDKFIG-LIENEMIENMVSKL 127
D I + ID EK + + ++++A+P + K+G D+F G L ++I+ + L
Sbjct: 112 DKIQVVKIDTEKYPSIANKYKIEALPTFILFKDGEPCDRFEGALTAKQLIQRIEDSL 168
>sp|Q9LXZ8|TRH10_ARATH Putative thioredoxin H10 OS=Arabidopsis thaliana GN=At3g56420 PE=3
SV=2
Length = 154
Score = 59.7 bits (143), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 30/92 (32%), Positives = 50/92 (54%)
Query: 28 IENNEQFIKHVMNNPVPVIVNFHAEWCEPCHLLTPQLKKMLGNSDSIDLAIIDVEKNAEL 87
IE E+ I N+ ++VNF A WC PC + P + + S+ +DVE+ AE
Sbjct: 48 IEKWEEKITEANNHGKILVVNFSAPWCVPCKKIEPVFRDLASRYPSMIFVTVDVEELAEF 107
Query: 88 VHTFEVKAVPAVLAVKNGLVIDKFIGLIENEM 119
+ + V+A P V+ +K+G +DK +G +E+
Sbjct: 108 SNEWNVEATPTVVFLKDGRQMDKLVGAETSEL 139
>sp|Q5JMR9|TRXY_ORYSJ Thioredoxin Y, chloroplastic OS=Oryza sativa subsp. japonica
GN=Os01g0963400 PE=2 SV=2
Length = 168
Score = 59.3 bits (142), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 31/88 (35%), Positives = 52/88 (59%), Gaps = 6/88 (6%)
Query: 44 PVIVNFHAEWCEPCHLLTPQLKKM---LGNSDSIDLAIIDVEKNAELVHTFEVKAVPAVL 100
PV+V+F+A WC PC + P L+++ LG D I + ID EK + + ++++A+P +
Sbjct: 79 PVLVDFYATWCGPCQYMVPILQEVSEKLG--DKIQVVKIDTEKYTSIANRYQIEALPTFI 136
Query: 101 AVKNGLVIDKFIG-LIENEMIENMVSKL 127
KNG +F G L N++I+ + S L
Sbjct: 137 IFKNGKPCHRFEGALPANQLIQQIESAL 164
>sp|Q4L5F0|THIO_STAHJ Thioredoxin OS=Staphylococcus haemolyticus (strain JCSC1435)
GN=trxA PE=3 SV=1
Length = 104
Score = 59.3 bits (142), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 27/84 (32%), Positives = 49/84 (58%), Gaps = 1/84 (1%)
Query: 46 IVNFHAEWCEPCHLLTPQLKKMLGNSDS-IDLAIIDVEKNAELVHTFEVKAVPAVLAVKN 104
+V+F A WC PC ++ P L+++ G+ D D+ +DV++N FEV ++P ++ K+
Sbjct: 21 LVDFWATWCGPCKMIAPVLEELAGDYDGKADILKLDVDENPSTAAKFEVMSIPTLIVFKD 80
Query: 105 GLVIDKFIGLIENEMIENMVSKLL 128
G +DK +G E + ++ K L
Sbjct: 81 GEPVDKVVGFQPKENLAEVLDKHL 104
>sp|P80579|THIO_ALIAC Thioredoxin OS=Alicyclobacillus acidocaldarius GN=trxA PE=1 SV=1
Length = 105
Score = 59.3 bits (142), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 25/94 (26%), Positives = 52/94 (55%), Gaps = 1/94 (1%)
Query: 36 KHVMNNPVPVIVNFHAEWCEPCHLLTPQLKKML-GNSDSIDLAIIDVEKNAELVHTFEVK 94
+ + PV+V+F A WC PC ++ P L++ ++D + +A ++V++N E F +
Sbjct: 11 QQAIQGDKPVLVDFWAAWCGPCRMMAPVLEEFAEAHADKVTVAKLNVDENPETTSQFGIM 70
Query: 95 AVPAVLAVKNGLVIDKFIGLIENEMIENMVSKLL 128
++P ++ K G + + IG E +E ++ +L
Sbjct: 71 SIPTLILFKGGRPVKQLIGYQPKEQLEAQLADVL 104
>sp|P10472|THIO_CHLLT Thioredoxin OS=Chlorobium limicola f.sp. thiosulfatophilum GN=trxA
PE=1 SV=5
Length = 108
Score = 58.9 bits (141), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 24/96 (25%), Positives = 56/96 (58%), Gaps = 1/96 (1%)
Query: 26 YIIENNEQFIKHVMNNPVPVIVNFHAEWCEPCHLLTPQLKKMLGNSDSIDL-AIIDVEKN 84
Y ++ F ++++ V+V+F A WC PC +L P ++++ + + + A ++V++N
Sbjct: 4 YFEATDKNFQTEILDSDKAVLVDFWASWCGPCMMLGPVIEQLADDYEGKAIIAKLNVDEN 63
Query: 85 AELVHTFEVKAVPAVLAVKNGLVIDKFIGLIENEMI 120
+ + ++++P +L +K G V+D+ +G + MI
Sbjct: 64 PNIAGQYGIRSIPTMLIIKGGKVVDQMVGALPKNMI 99
>sp|Q851R5|TRH22_ORYSJ Thioredoxin H2-2 OS=Oryza sativa subsp. japonica GN=Os03g0800700
PE=2 SV=1
Length = 134
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 25/89 (28%), Positives = 48/89 (53%)
Query: 31 NEQFIKHVMNNPVPVIVNFHAEWCEPCHLLTPQLKKMLGNSDSIDLAIIDVEKNAELVHT 90
+EQ+ H N ++++F A WC PC + P K M G IDV++ +E+
Sbjct: 33 DEQWGAHKSNPNKLIVIDFSATWCGPCRFIEPAFKDMAGRFADAVFFKIDVDELSEVARQ 92
Query: 91 FEVKAVPAVLAVKNGLVIDKFIGLIENEM 119
++V+A+P + +K G + + +G ++E+
Sbjct: 93 WKVEAMPTFVLIKGGKEVSRVVGAKKDEL 121
>sp|P85801|TRXH_POPJC Thioredoxin H-type OS=Populus jackii PE=1 SV=1
Length = 139
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 30/107 (28%), Positives = 55/107 (51%), Gaps = 3/107 (2%)
Query: 29 ENNEQFIKHVMNNPVPVIVNFHAEWCEPCHLLTPQLKKMLGNSDSIDLAIIDVEKNAELV 88
E +Q + + V+ NF A WC PC + P ++ N S+ +IDV++ ++
Sbjct: 33 ERWDQKLSEASRDGKIVLANFSARWCGPCKQIAPYYIELSENYPSLMFLVIDVDELSDFS 92
Query: 89 HTFEVKAVPAVLAVKNGLVIDKFIGLIENEM---IENMVSKLLPKDK 132
++E+KA P +++G +DK +G + E+ I ++ L P DK
Sbjct: 93 ASWEIKATPTFFFLRDGQQVDKLVGANKPELHKKITAILDSLPPSDK 139
>sp|Q38879|TRXH2_ARATH Thioredoxin H2 OS=Arabidopsis thaliana GN=TRX2 PE=2 SV=2
Length = 133
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 28/83 (33%), Positives = 48/83 (57%), Gaps = 1/83 (1%)
Query: 45 VIVNFHAEWCEPCHLLTPQLKKMLGNSDSIDLAIIDVEKNAELVHTFEVKAVPAVLAVKN 104
++V+F A WC PC ++ P + M + +D +DV++ ++ F V A+P + VK
Sbjct: 50 LVVDFSASWCGPCRMIEPAIHAMADKFNDVDFVKLDVDELPDVAKEFNVTAMPTFVLVKR 109
Query: 105 GLVIDKFIGLIENEMIENMVSKL 127
G I++ IG ++E+ E VSKL
Sbjct: 110 GKEIERIIGAKKDEL-EKKVSKL 131
>sp|Q6Z4I3|TRH21_ORYSJ Thioredoxin H2-1 OS=Oryza sativa subsp. japonica GN=Os07g0190800
PE=2 SV=1
Length = 138
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 22/75 (29%), Positives = 44/75 (58%)
Query: 45 VIVNFHAEWCEPCHLLTPQLKKMLGNSDSIDLAIIDVEKNAELVHTFEVKAVPAVLAVKN 104
V+++F A WC PC ++ P K+M G + +DV++ AE+ T+ V+A+P + +
Sbjct: 46 VVIDFSASWCGPCKMMEPVFKEMAGRFTDVAFLKVDVDELAEVARTWRVEAMPTFVLARG 105
Query: 105 GLVIDKFIGLIENEM 119
G + + +G ++E+
Sbjct: 106 GEEVGRIVGADKDEL 120
>sp|Q8CPL5|THIO_STAES Thioredoxin OS=Staphylococcus epidermidis (strain ATCC 12228)
GN=trxA PE=3 SV=1
Length = 104
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 26/84 (30%), Positives = 49/84 (58%), Gaps = 1/84 (1%)
Query: 46 IVNFHAEWCEPCHLLTPQLKKMLGNSDS-IDLAIIDVEKNAELVHTFEVKAVPAVLAVKN 104
+V+F A WC PC ++ P L+++ G+ D D+ +DV++N +EV ++P ++ K+
Sbjct: 21 LVDFWATWCGPCKMIAPVLEELAGDYDGKADILKLDVDENPSTAAKYEVMSIPTLIVFKD 80
Query: 105 GLVIDKFIGLIENEMIENMVSKLL 128
G +DK +G E + ++ K L
Sbjct: 81 GEPVDKVVGFQPKENLAEVLDKHL 104
>sp|Q5HQ29|THIO_STAEQ Thioredoxin OS=Staphylococcus epidermidis (strain ATCC 35984 /
RP62A) GN=trxA PE=3 SV=1
Length = 104
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 26/84 (30%), Positives = 49/84 (58%), Gaps = 1/84 (1%)
Query: 46 IVNFHAEWCEPCHLLTPQLKKMLGNSDS-IDLAIIDVEKNAELVHTFEVKAVPAVLAVKN 104
+V+F A WC PC ++ P L+++ G+ D D+ +DV++N +EV ++P ++ K+
Sbjct: 21 LVDFWATWCGPCKMIAPVLEELAGDYDGKADILKLDVDENPSTAAKYEVMSIPTLIVFKD 80
Query: 105 GLVIDKFIGLIENEMIENMVSKLL 128
G +DK +G E + ++ K L
Sbjct: 81 GEPVDKVVGFQPKENLAEVLDKHL 104
>sp|P50254|THIO_PORYE Thioredoxin OS=Porphyra yezoensis GN=trxA PE=3 SV=1
Length = 107
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 25/100 (25%), Positives = 56/100 (56%), Gaps = 1/100 (1%)
Query: 30 NNEQFIKHVMNNPVPVIVNFHAEWCEPCHLLTPQLKKMLGNSD-SIDLAIIDVEKNAELV 88
+ F + V+NN +PV+V+F A WC PC +++P + ++ + SI + I+ + N +
Sbjct: 7 TDASFKQEVINNNLPVLVDFWAPWCGPCRMVSPVVDEIAEEYESSIKVVKINTDDNPTIA 66
Query: 89 HTFEVKAVPAVLAVKNGLVIDKFIGLIENEMIENMVSKLL 128
+ ++++P ++ K G +D IG + + + ++K +
Sbjct: 67 AEYGIRSIPTLMIFKAGERVDTVIGAVPKSTLASTLNKYI 106
>sp|Q9R6P9|THIO_MYCGA Thioredoxin OS=Mycoplasma gallisepticum (strain R(low / passage 15
/ clone 2)) GN=trxA PE=3 SV=2
Length = 100
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 26/93 (27%), Positives = 54/93 (58%), Gaps = 1/93 (1%)
Query: 30 NNEQFIKHVMNNPVPVIVNFHAEWCEPCHLLTPQLKKMLGNSDSIDLAIIDVEKNAELVH 89
N+ + +++ V+V+F+A WC PC +L P +++ + +DV++ E+
Sbjct: 5 TNKAELDQLLSTNKKVVVDFYANWCGPCKILGPIFEEVAQDKKDWTFVKVDVDQANEISS 64
Query: 90 TFEVKAVPAVLAVKNGLVIDKFIGLI-ENEMIE 121
+E++++P V+ ++G + DK IG I +NE+ E
Sbjct: 65 EYEIRSIPTVIFFQDGKMADKRIGFIPKNELKE 97
>sp|Q09433|THIO1_CAEEL Thioredoxin-1 OS=Caenorhabditis elegans GN=trx-1 PE=2 SV=1
Length = 115
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 30/116 (25%), Positives = 58/116 (50%), Gaps = 8/116 (6%)
Query: 10 LFKRCFNHFLERKFKSYIIENNEQFIKHVMNNPVPVIV-NFHAEWCEPCHLLTPQLKKML 68
+ KRC FK+ + F + + +P +I+ +F+A WC PC + P K++
Sbjct: 1 MLKRC-------NFKNQVKYFQSDFEQLIRQHPEKIIILDFYATWCGPCKAIAPLYKELA 53
Query: 69 GNSDSIDLAIIDVEKNAELVHTFEVKAVPAVLAVKNGLVIDKFIGLIENEMIENMV 124
I +DV++ +L ++VK +P + KNG I+ G +E+E+ + ++
Sbjct: 54 TTHKGIIFCKVDVDEAEDLCSKYDVKMMPTFIFTKNGDAIEALEGCVEDELRQKVL 109
>sp|P0A616|THIO_MYCTU Thioredoxin OS=Mycobacterium tuberculosis GN=trxA PE=1 SV=2
Length = 116
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 30/109 (27%), Positives = 59/109 (54%), Gaps = 4/109 (3%)
Query: 24 KSYIIE-NNEQFIKHVMNNPVPVIVNFHAEWCEPCHLLTPQLKKMLGNSDSIDLAI--ID 80
KS I+ + F V+++ PV+V+F A WC PC ++ P L++ + + DL + +D
Sbjct: 6 KSATIKVTDASFATDVLSSNKPVLVDFWATWCGPCKMVAPVLEE-IATERATDLTVAKLD 64
Query: 81 VEKNAELVHTFEVKAVPAVLAVKNGLVIDKFIGLIENEMIENMVSKLLP 129
V+ N E F+V ++P ++ K+G + + +G + +S ++P
Sbjct: 65 VDTNPETARNFQVVSIPTLILFKDGQPVKRIVGAKGKAALLRELSDVVP 113
>sp|P0A617|THIO_MYCBO Thioredoxin OS=Mycobacterium bovis (strain ATCC BAA-935 /
AF2122/97) GN=trxA PE=3 SV=2
Length = 116
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 30/109 (27%), Positives = 59/109 (54%), Gaps = 4/109 (3%)
Query: 24 KSYIIE-NNEQFIKHVMNNPVPVIVNFHAEWCEPCHLLTPQLKKMLGNSDSIDLAI--ID 80
KS I+ + F V+++ PV+V+F A WC PC ++ P L++ + + DL + +D
Sbjct: 6 KSATIKVTDASFATDVLSSNKPVLVDFWATWCGPCKMVAPVLEE-IATERATDLTVAKLD 64
Query: 81 VEKNAELVHTFEVKAVPAVLAVKNGLVIDKFIGLIENEMIENMVSKLLP 129
V+ N E F+V ++P ++ K+G + + +G + +S ++P
Sbjct: 65 VDTNPETARNFQVVSIPTLILFKDGQPVKRIVGAKGKAALLRELSDVVP 113
>sp|Q49WR2|THIO_STAS1 Thioredoxin OS=Staphylococcus saprophyticus subsp. saprophyticus
(strain ATCC 15305 / DSM 20229) GN=trxA PE=3 SV=1
Length = 104
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 26/84 (30%), Positives = 49/84 (58%), Gaps = 1/84 (1%)
Query: 46 IVNFHAEWCEPCHLLTPQLKKMLGNSDS-IDLAIIDVEKNAELVHTFEVKAVPAVLAVKN 104
+V+F A WC PC ++ P L+++ G+ D ++ +DV++N FEV ++P ++ K+
Sbjct: 21 LVDFWATWCGPCKMIAPVLEELAGDYDGKANILKLDVDENPSTAAKFEVMSIPTLIVFKD 80
Query: 105 GLVIDKFIGLIENEMIENMVSKLL 128
G +DK +G E + ++ K L
Sbjct: 81 GEPVDKVVGFQPKENLAEVIEKHL 104
>sp|P23400|TRXM_CHLRE Thioredoxin M-type, chloroplastic OS=Chlamydomonas reinhardtii
GN=TRXM PE=1 SV=3
Length = 140
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 25/100 (25%), Positives = 52/100 (52%), Gaps = 1/100 (1%)
Query: 30 NNEQFIKHVMNNPVPVIVNFHAEWCEPCHLLTPQLKKMLGN-SDSIDLAIIDVEKNAELV 88
N++ F V+ + VPV+V+F A WC PC ++ P + ++ G D + ++ +++ +
Sbjct: 40 NDDTFKNVVLESSVPVLVDFWAPWCGPCRIIAPVVDEIAGEYKDKLKCVKLNTDESPNVA 99
Query: 89 HTFEVKAVPAVLAVKNGLVIDKFIGLIENEMIENMVSKLL 128
+ ++++P ++ K G + IG + I V K L
Sbjct: 100 SEYGIRSIPTIMVFKGGKKCETIIGAVPKATIVQTVEKYL 139
>sp|P43785|THIO_HAEIN Thioredoxin OS=Haemophilus influenzae (strain ATCC 51907 / DSM
11121 / KW20 / Rd) GN=trxA PE=3 SV=1
Length = 107
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 25/98 (25%), Positives = 55/98 (56%), Gaps = 1/98 (1%)
Query: 30 NNEQFIKHVMNNPVPVIVNFHAEWCEPCHLLTPQLKKMLGN-SDSIDLAIIDVEKNAELV 88
N+ F V+N+ +P++++F A WC PC ++ P L ++ + + + ++V+ N
Sbjct: 8 NDADFESVVVNSDIPILLDFWAPWCGPCKMIAPVLDELAPEFAGKVKIVKMNVDDNQATP 67
Query: 89 HTFEVKAVPAVLAVKNGLVIDKFIGLIENEMIENMVSK 126
F V+++P +L +KNG V+ +G + + N +++
Sbjct: 68 AQFGVRSIPTLLLIKNGQVVATQVGALPKTQLANFINQ 105
>sp|Q4UNK3|THIO_RICFE Thioredoxin OS=Rickettsia felis (strain ATCC VR-1525 / URRWXCal2)
GN=trxA PE=3 SV=2
Length = 105
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 28/99 (28%), Positives = 57/99 (57%), Gaps = 5/99 (5%)
Query: 31 NEQFIKHVMNNPVPVIVNFHAEWCEPCHLLTP---QLKKMLGNSDSIDLAIIDVEKNAEL 87
+ F K V+ + +PV+V+F AEWC PC +LTP ++ K L + + +++++N +
Sbjct: 7 DSSFKKEVLESDLPVLVDFWAEWCGPCKMLTPIIDEISKEL--KGKVKVLKMNIDENPNI 64
Query: 88 VHTFEVKAVPAVLAVKNGLVIDKFIGLIENEMIENMVSK 126
+ ++++P ++ KNG D IGL + + + ++K
Sbjct: 65 PSEYGIRSIPTIMLFKNGEQKDTKIGLQQKNSLLDWINK 103
>sp|P46843|TRXB_MYCLE Bifunctional thioredoxin reductase/thioredoxin OS=Mycobacterium
leprae (strain TN) GN=trxB/A PE=3 SV=1
Length = 458
Score = 57.0 bits (136), Expect = 3e-08, Method: Composition-based stats.
Identities = 23/84 (27%), Positives = 49/84 (58%), Gaps = 1/84 (1%)
Query: 31 NEQFIKHVMNNPVPVIVNFHAEWCEPCHLLTPQLKKMLGNS-DSIDLAIIDVEKNAELVH 89
+ F V+++ PV+V+F A WC PC ++ P L+++ + + +A +DV+ N E+
Sbjct: 356 DASFFADVLSSNKPVLVDFWATWCGPCKMVAPVLEEIASEQRNQLTVAKLDVDTNPEMAR 415
Query: 90 TFEVKAVPAVLAVKNGLVIDKFIG 113
F+V ++P ++ + G + + +G
Sbjct: 416 EFQVVSIPTMILFQGGQPVKRIVG 439
>sp|Q9PJK3|THIO_CHLMU Thioredoxin OS=Chlamydia muridarum (strain MoPn / Nigg) GN=trxA
PE=3 SV=1
Length = 102
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 23/82 (28%), Positives = 48/82 (58%)
Query: 45 VIVNFHAEWCEPCHLLTPQLKKMLGNSDSIDLAIIDVEKNAELVHTFEVKAVPAVLAVKN 104
V+V+F AEWC PC +LTP L+ + + + +D++ + F V ++P ++ K+
Sbjct: 19 VLVDFFAEWCGPCKMLTPVLEALAAELPYVTILKLDIDASPRPAEQFGVSSIPTLILFKD 78
Query: 105 GLVIDKFIGLIENEMIENMVSK 126
G +++ +GL + + + ++SK
Sbjct: 79 GKEVERSVGLKDKDSLVKLISK 100
>sp|P08058|THIO_RHOSH Thioredoxin OS=Rhodobacter sphaeroides GN=trxA PE=1 SV=3
Length = 106
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 28/105 (26%), Positives = 52/105 (49%), Gaps = 1/105 (0%)
Query: 25 SYIIENNEQFIKHVMNNPVPVIVNFHAEWCEPCHLLTPQLKKMLGN-SDSIDLAIIDVEK 83
S + + F V + VPV+V+F AEWC PC + P L+++ + + + ++V++
Sbjct: 2 STVPVTDATFDTEVRKSDVPVVVDFWAEWCGPCRQIGPALEELSKEYAGKVKIVKVNVDE 61
Query: 84 NAELVHTFEVKAVPAVLAVKNGLVIDKFIGLIENEMIENMVSKLL 128
N E V+ +PA+ KNG V+ +G + ++ L
Sbjct: 62 NPESPAMLGVRGIPALFLFKNGQVVSNKVGAAPKAALATWIASAL 106
>sp|Q92JR5|THIO_RICCN Thioredoxin OS=Rickettsia conorii (strain ATCC VR-613 / Malish 7)
GN=trxA PE=3 SV=1
Length = 105
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 28/99 (28%), Positives = 56/99 (56%), Gaps = 5/99 (5%)
Query: 31 NEQFIKHVMNNPVPVIVNFHAEWCEPCHLLTP---QLKKMLGNSDSIDLAIIDVEKNAEL 87
+ F K V+ + +PV+V+F AEWC PC +LTP ++ K L + + +++++N
Sbjct: 7 DSSFKKEVLESDLPVLVDFWAEWCGPCKMLTPIIDEISKEL--QGKVKVLKMNIDENPNT 64
Query: 88 VHTFEVKAVPAVLAVKNGLVIDKFIGLIENEMIENMVSK 126
+ ++++P ++ KNG D IGL + + + ++K
Sbjct: 65 PSEYGIRSIPTIMLFKNGEQKDTKIGLQQKNSLLDWINK 103
>sp|Q68Y00|THIO_RICTY Thioredoxin OS=Rickettsia typhi (strain ATCC VR-144 / Wilmington)
GN=trxA PE=3 SV=1
Length = 105
Score = 56.6 bits (135), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 27/94 (28%), Positives = 55/94 (58%), Gaps = 1/94 (1%)
Query: 34 FIKHVMNNPVPVIVNFHAEWCEPCHLLTPQLKKMLGN-SDSIDLAIIDVEKNAELVHTFE 92
F V+ + +PVIV+F AEWC PC +L P + ++ D + + +++++N + +
Sbjct: 10 FKNEVLESDLPVIVDFWAEWCGPCKMLIPIIDEISKELQDKVKVLKMNIDENPKTPSEYG 69
Query: 93 VKAVPAVLAVKNGLVIDKFIGLIENEMIENMVSK 126
V+++P ++ KNG D IGL + + + + ++K
Sbjct: 70 VRSIPTIMLFKNGEQKDTKIGLQQKKSLLDWINK 103
>sp|O84544|THIO_CHLTR Thioredoxin OS=Chlamydia trachomatis (strain D/UW-3/Cx) GN=trxA
PE=3 SV=1
Length = 102
Score = 56.2 bits (134), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 21/82 (25%), Positives = 48/82 (58%)
Query: 45 VIVNFHAEWCEPCHLLTPQLKKMLGNSDSIDLAIIDVEKNAELVHTFEVKAVPAVLAVKN 104
V+++F AEWC PC +LTP L+ + + + +D++ + + V ++P ++ K+
Sbjct: 19 VLIDFFAEWCGPCKMLTPVLEALAAELPHVTILKVDIDSSPRPAEQYSVSSIPTLILFKD 78
Query: 105 GLVIDKFIGLIENEMIENMVSK 126
G +++ +GL + + + ++SK
Sbjct: 79 GKEVERSVGLKDKDSLIKLISK 100
>sp|P0A4L1|THIO1_NOSS1 Thioredoxin-1 OS=Nostoc sp. (strain PCC 7120 / UTEX 2576) GN=trxA
PE=3 SV=2
Length = 107
Score = 56.2 bits (134), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 22/100 (22%), Positives = 54/100 (54%), Gaps = 1/100 (1%)
Query: 30 NNEQFIKHVMNNPVPVIVNFHAEWCEPCHLLTPQLKKMLGNSDS-IDLAIIDVEKNAELV 88
+ F + V+++ VPV+V+F A WC PC ++ P + ++ + I + ++ ++N ++
Sbjct: 8 TDSTFKQEVLDSDVPVLVDFWAPWCGPCRMVAPVVDEIAQQYEGKIKVVKVNTDENPQVA 67
Query: 89 HTFEVKAVPAVLAVKNGLVIDKFIGLIENEMIENMVSKLL 128
+ ++++P ++ K G +D +G + + + K L
Sbjct: 68 SQYGIRSIPTLMIFKGGQKVDMVVGAVPKTTLSQTLEKHL 107
>sp|P0A4L2|THIO1_ANASO Thioredoxin-1 OS=Anabaena sp. (strain PCC 7119) GN=trxA PE=1 SV=2
Length = 107
Score = 56.2 bits (134), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 22/100 (22%), Positives = 54/100 (54%), Gaps = 1/100 (1%)
Query: 30 NNEQFIKHVMNNPVPVIVNFHAEWCEPCHLLTPQLKKMLGNSDS-IDLAIIDVEKNAELV 88
+ F + V+++ VPV+V+F A WC PC ++ P + ++ + I + ++ ++N ++
Sbjct: 8 TDSTFKQEVLDSDVPVLVDFWAPWCGPCRMVAPVVDEIAQQYEGKIKVVKVNTDENPQVA 67
Query: 89 HTFEVKAVPAVLAVKNGLVIDKFIGLIENEMIENMVSKLL 128
+ ++++P ++ K G +D +G + + + K L
Sbjct: 68 SQYGIRSIPTLMIFKGGQKVDMVVGAVPKTTLSQTLEKHL 107
>sp|P14949|THIO_BACSU Thioredoxin OS=Bacillus subtilis (strain 168) GN=trxA PE=1 SV=3
Length = 104
Score = 55.8 bits (133), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 26/85 (30%), Positives = 50/85 (58%), Gaps = 1/85 (1%)
Query: 45 VIVNFHAEWCEPCHLLTPQLKKMLGN-SDSIDLAIIDVEKNAELVHTFEVKAVPAVLAVK 103
V+ +F A WC PC ++ P L+++ D + + IDV++N E + V ++P +L +K
Sbjct: 20 VLADFWAPWCGPCKMIAPVLEELDQEMGDKLKIVKIDVDENQETAGKYGVMSIPTLLVLK 79
Query: 104 NGLVIDKFIGLIENEMIENMVSKLL 128
+G V++ +G E ++ +V+K L
Sbjct: 80 DGEVVETSVGFKPKEALQELVNKHL 104
>sp|P07591|TRXM_SPIOL Thioredoxin M-type, chloroplastic OS=Spinacia oleracea PE=1 SV=2
Length = 181
Score = 55.8 bits (133), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 26/100 (26%), Positives = 53/100 (53%), Gaps = 1/100 (1%)
Query: 30 NNEQFIKHVMNNPVPVIVNFHAEWCEPCHLLTPQLKKMLGN-SDSIDLAIIDVEKNAELV 88
N+ + + V+ + VPV+V+F A WC PC L+ P + ++ S I + ++ ++ +
Sbjct: 80 NDSSWKEFVLESEVPVMVDFWAPWCGPCKLIAPVIDELAKEYSGKIAVYKLNTDEAPGIA 139
Query: 89 HTFEVKAVPAVLAVKNGLVIDKFIGLIENEMIENMVSKLL 128
+ ++++P VL KNG + IG + + + + K L
Sbjct: 140 TQYNIRSIPTVLFFKNGERKESIIGAVPKSTLTDSIEKYL 179
>sp|P25372|TRX3_YEAST Thioredoxin-3, mitochondrial OS=Saccharomyces cerevisiae (strain
ATCC 204508 / S288c) GN=TRX3 PE=1 SV=1
Length = 127
Score = 55.5 bits (132), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 28/117 (23%), Positives = 59/117 (50%), Gaps = 16/117 (13%)
Query: 1 MSVKQFQSTLFKRCFNHFLE----RKFKSYIIENNEQFIKHVMNNPVPVIVNFHAEWCEP 56
M+V+ +S F+ + + +F++ I +N++ ++++F+A WC P
Sbjct: 10 MAVRPLKSIRFQSSYTSITKLTNLTEFRNLIKQNDK------------LVIDFYATWCGP 57
Query: 57 CHLLTPQLKKMLGNSDSIDLAIIDVEKNAELVHTFEVKAVPAVLAVKNGLVIDKFIG 113
C ++ P L K++ + DV+++ ++ EV A+P + K+G +I K IG
Sbjct: 58 CKMMQPHLTKLIQAYPDVRFVKCDVDESPDIAKECEVTAMPTFVLGKDGQLIGKIIG 114
>sp|Q9SEU6|TRXM4_ARATH Thioredoxin M4, chloroplastic OS=Arabidopsis thaliana GN=At3g15360
PE=1 SV=2
Length = 193
Score = 55.5 bits (132), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 24/100 (24%), Positives = 52/100 (52%), Gaps = 1/100 (1%)
Query: 30 NNEQFIKHVMNNPVPVIVNFHAEWCEPCHLLTPQLKKMLGN-SDSIDLAIIDVEKNAELV 88
++ ++ V+ + VPV+V F A WC PC ++ P + ++ + + I+ +++
Sbjct: 92 SDSEWQTKVLESDVPVLVEFWAPWCGPCRMIHPIVDQLAKDFAGKFKFYKINTDESPNTA 151
Query: 89 HTFEVKAVPAVLAVKNGLVIDKFIGLIENEMIENMVSKLL 128
+ + +++VP V+ K G D IG + E +E + + L
Sbjct: 152 NRYGIRSVPTVIIFKGGEKKDSIIGAVPRETLEKTIERFL 191
>sp|O30974|THIO_MYCSM Thioredoxin OS=Mycobacterium smegmatis GN=trxA PE=3 SV=1
Length = 112
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 25/87 (28%), Positives = 48/87 (55%), Gaps = 3/87 (3%)
Query: 30 NNEQFIKHVMNNPVPVIVNFHAEWCEPCHLLTPQLKKMLG-NSDSIDLAII--DVEKNAE 86
++ F V+ + PV+V+F A WC PC ++ P L+++ D + +A I DV+ N
Sbjct: 11 TDDSFSTDVLGSSKPVLVDFWATWCGPCKMVAPVLEEIAAEKGDQLTVAKIDVDVDANPA 70
Query: 87 LVHTFEVKAVPAVLAVKNGLVIDKFIG 113
F+V ++P ++ K+G + + +G
Sbjct: 71 TARDFQVVSIPTMILFKDGAPVKRIVG 97
>sp|Q9CM49|THIO_PASMU Thioredoxin OS=Pasteurella multocida (strain Pm70) GN=trxA PE=3
SV=1
Length = 106
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 24/99 (24%), Positives = 53/99 (53%), Gaps = 1/99 (1%)
Query: 29 ENNEQFIKHVMNNPVPVIVNFHAEWCEPCHLLTPQLKKMLGN-SDSIDLAIIDVEKNAEL 87
+ F V+N+ VPV+++F A WC PC +++P L ++ S + + I++++N
Sbjct: 6 STDATFTADVVNSDVPVLLDFWAPWCGPCRMISPILDEIAAEFSGKVKVVKINIDENQAT 65
Query: 88 VHTFEVKAVPAVLAVKNGLVIDKFIGLIENEMIENMVSK 126
V+++P ++ KNG + +G + + N +++
Sbjct: 66 PAQLGVRSIPTLVLFKNGKAVATQVGALPKNQLANFINQ 104
>sp|P52228|THIO3_CORNE Thioredoxin C-3 OS=Corynebacterium nephridii PE=3 SV=1
Length = 145
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 26/90 (28%), Positives = 47/90 (52%), Gaps = 1/90 (1%)
Query: 28 IENNEQ-FIKHVMNNPVPVIVNFHAEWCEPCHLLTPQLKKMLGNSDSIDLAIIDVEKNAE 86
IE NEQ F + N+ +PV+++ AEWC PC ++ P ++ + + A ID E N
Sbjct: 38 IELNEQNFSNFISNSDLPVLIDLWAEWCGPCKMMAPHFAQVAKQNPYVVFAKIDTEANPR 97
Query: 87 LVHTFEVKAVPAVLAVKNGLVIDKFIGLIE 116
L F V+++P ++ + + + G +
Sbjct: 98 LSAAFNVRSIPTLVLMNKTTEVARISGALR 127
>sp|P20857|THIO2_NOSS1 Thioredoxin-2 OS=Nostoc sp. (strain PCC 7120 / UTEX 2576) GN=trxB
PE=1 SV=3
Length = 111
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 30/97 (30%), Positives = 51/97 (52%), Gaps = 3/97 (3%)
Query: 24 KSYIIENNEQFIKHVMNNPVPVIVNFHAEWCEPCHLLTPQLKKMLGN--SDSIDLAIIDV 81
K I + +F V+ PV+V F A WC PC L++P L + N SD + + +++
Sbjct: 3 KGVITITDAEFESEVLKAEQPVLVYFWASWCGPCQLMSP-LINLAANTYSDRLKVVKLEI 61
Query: 82 EKNAELVHTFEVKAVPAVLAVKNGLVIDKFIGLIENE 118
+ N V ++V+ VPA+ VK ++D G+I +
Sbjct: 62 DPNPTTVKKYKVEGVPALRLVKGEQILDSTEGVISKD 98
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.322 0.137 0.404
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 48,942,134
Number of Sequences: 539616
Number of extensions: 1956899
Number of successful extensions: 5495
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 280
Number of HSP's successfully gapped in prelim test: 126
Number of HSP's that attempted gapping in prelim test: 4991
Number of HSP's gapped (non-prelim): 510
length of query: 135
length of database: 191,569,459
effective HSP length: 100
effective length of query: 35
effective length of database: 137,607,859
effective search space: 4816275065
effective search space used: 4816275065
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 55 (25.8 bits)