BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy6820
(639 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|4FG9|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FG9|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FGB|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I Apo Form
Length = 320
Score = 226 bits (576), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 115/261 (44%), Positives = 163/261 (62%), Gaps = 7/261 (2%)
Query: 379 YSVGQIIGDGNFAVVRQVYDKHKDMDCALKIIDKSKLLGKKQMIENEVNILRSVNHPNII 438
Y ++G G F+ V DK A+K I K L GK+ +ENE+ +L + HPNI+
Sbjct: 20 YDFRDVLGTGAFSEVILAEDKRTQKLVAIKCIAKEALEGKEGSMENEIAVLHKIKHPNIV 79
Query: 439 KLLDEYDTNNELYLVIELIKGGDLFDAISKNVKFSEEDSKFMTQSLASALSYLHDNYIVH 498
L D Y++ LYL+++L+ GG+LFD I + ++E D+ + + A+ YLHD IVH
Sbjct: 80 ALDDIYESGGHLYLIMQLVSGGELFDRIVEKGFYTERDASRLIFQVLDAVKYLHDLGIVH 139
Query: 499 RDIKPENLLVEMSGCHVKVLKVGDFGLAQRVLRP---MFTVCGTPTYVAPEILNESGYGV 555
RD+KPENLL K++ + DFGL+ ++ P + T CGTP YVAPE+L + Y
Sbjct: 140 RDLKPENLLYYSLDEDSKIM-ISDFGLS-KMEDPGSVLSTACGTPGYVAPEVLAQKPYSK 197
Query: 556 KIDVWAAGVILYILLCGFPPFVSDTNDQDELFDDILSGQYGFPSPYWDDISEEAKELISH 615
+D W+ GVI YILLCG+PPF D ND +LF+ IL +Y F SPYWDDIS+ AK+ I H
Sbjct: 198 AVDCWSIGVIAYILLCGYPPFY-DENDA-KLFEQILKAEYEFDSPYWDDISDSAKDFIRH 255
Query: 616 MLESNPDLRFSAEDVLDHPWL 636
++E +P+ RF+ E L HPW+
Sbjct: 256 LMEKDPEKRFTCEQALQHPWI 276
>pdb|1A06|A Chain A, Calmodulin-Dependent Protein Kinase From Rat
Length = 332
Score = 226 bits (576), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 115/261 (44%), Positives = 163/261 (62%), Gaps = 7/261 (2%)
Query: 379 YSVGQIIGDGNFAVVRQVYDKHKDMDCALKIIDKSKLLGKKQMIENEVNILRSVNHPNII 438
Y ++G G F+ V DK A+K I K L GK+ +ENE+ +L + HPNI+
Sbjct: 20 YDFRDVLGTGAFSEVILAEDKRTQKLVAIKCIAKKALEGKEGSMENEIAVLHKIKHPNIV 79
Query: 439 KLLDEYDTNNELYLVIELIKGGDLFDAISKNVKFSEEDSKFMTQSLASALSYLHDNYIVH 498
L D Y++ LYL+++L+ GG+LFD I + ++E D+ + + A+ YLHD IVH
Sbjct: 80 ALDDIYESGGHLYLIMQLVSGGELFDRIVEKGFYTERDASRLIFQVLDAVKYLHDLGIVH 139
Query: 499 RDIKPENLLVEMSGCHVKVLKVGDFGLAQRVLRP---MFTVCGTPTYVAPEILNESGYGV 555
RD+KPENLL K++ + DFGL+ ++ P + T CGTP YVAPE+L + Y
Sbjct: 140 RDLKPENLLYYSLDEDSKIM-ISDFGLS-KMEDPGSVLSTACGTPGYVAPEVLAQKPYSK 197
Query: 556 KIDVWAAGVILYILLCGFPPFVSDTNDQDELFDDILSGQYGFPSPYWDDISEEAKELISH 615
+D W+ GVI YILLCG+PPF D ND +LF+ IL +Y F SPYWDDIS+ AK+ I H
Sbjct: 198 AVDCWSIGVIAYILLCGYPPFY-DENDA-KLFEQILKAEYEFDSPYWDDISDSAKDFIRH 255
Query: 616 MLESNPDLRFSAEDVLDHPWL 636
++E +P+ RF+ E L HPW+
Sbjct: 256 LMEKDPEKRFTCEQALQHPWI 276
>pdb|4FG8|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
pdb|4FG8|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
Length = 315
Score = 226 bits (575), Expect = 4e-59, Method: Compositional matrix adjust.
Identities = 115/261 (44%), Positives = 163/261 (62%), Gaps = 7/261 (2%)
Query: 379 YSVGQIIGDGNFAVVRQVYDKHKDMDCALKIIDKSKLLGKKQMIENEVNILRSVNHPNII 438
Y ++G G F+ V DK A+K I K L GK+ +ENE+ +L + HPNI+
Sbjct: 20 YDFRDVLGTGAFSEVILAEDKRTQKLVAIKCIAKEALEGKEGSMENEIAVLHKIKHPNIV 79
Query: 439 KLLDEYDTNNELYLVIELIKGGDLFDAISKNVKFSEEDSKFMTQSLASALSYLHDNYIVH 498
L D Y++ LYL+++L+ GG+LFD I + ++E D+ + + A+ YLHD IVH
Sbjct: 80 ALDDIYESGGHLYLIMQLVSGGELFDRIVEKGFYTERDASRLIFQVLDAVKYLHDLGIVH 139
Query: 499 RDIKPENLLVEMSGCHVKVLKVGDFGLAQRVLRP---MFTVCGTPTYVAPEILNESGYGV 555
RD+KPENLL K++ + DFGL+ ++ P + T CGTP YVAPE+L + Y
Sbjct: 140 RDLKPENLLYYSLDEDSKIM-ISDFGLS-KMEDPGSVLSTACGTPGYVAPEVLAQKPYSK 197
Query: 556 KIDVWAAGVILYILLCGFPPFVSDTNDQDELFDDILSGQYGFPSPYWDDISEEAKELISH 615
+D W+ GVI YILLCG+PPF D ND +LF+ IL +Y F SPYWDDIS+ AK+ I H
Sbjct: 198 AVDCWSIGVIAYILLCGYPPFY-DENDA-KLFEQILKAEYEFDSPYWDDISDSAKDFIRH 255
Query: 616 MLESNPDLRFSAEDVLDHPWL 636
++E +P+ RF+ E L HPW+
Sbjct: 256 LMEKDPEKRFTCEQALQHPWI 276
>pdb|4FG7|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-293 In Complex With Atp
Length = 293
Score = 225 bits (573), Expect = 7e-59, Method: Compositional matrix adjust.
Identities = 115/261 (44%), Positives = 163/261 (62%), Gaps = 7/261 (2%)
Query: 379 YSVGQIIGDGNFAVVRQVYDKHKDMDCALKIIDKSKLLGKKQMIENEVNILRSVNHPNII 438
Y ++G G F+ V DK A+K I K L GK+ +ENE+ +L + HPNI+
Sbjct: 20 YDFRDVLGTGAFSEVILAEDKRTQKLVAIKCIAKEALEGKEGSMENEIAVLHKIKHPNIV 79
Query: 439 KLLDEYDTNNELYLVIELIKGGDLFDAISKNVKFSEEDSKFMTQSLASALSYLHDNYIVH 498
L D Y++ LYL+++L+ GG+LFD I + ++E D+ + + A+ YLHD IVH
Sbjct: 80 ALDDIYESGGHLYLIMQLVSGGELFDRIVEKGFYTERDASRLIFQVLDAVKYLHDLGIVH 139
Query: 499 RDIKPENLLVEMSGCHVKVLKVGDFGLAQRVLRP---MFTVCGTPTYVAPEILNESGYGV 555
RD+KPENLL K++ + DFGL+ ++ P + T CGTP YVAPE+L + Y
Sbjct: 140 RDLKPENLLYYSLDEDSKIM-ISDFGLS-KMEDPGSVLSTACGTPGYVAPEVLAQKPYSK 197
Query: 556 KIDVWAAGVILYILLCGFPPFVSDTNDQDELFDDILSGQYGFPSPYWDDISEEAKELISH 615
+D W+ GVI YILLCG+PPF D ND +LF+ IL +Y F SPYWDDIS+ AK+ I H
Sbjct: 198 AVDCWSIGVIAYILLCGYPPFY-DENDA-KLFEQILKAEYEFDSPYWDDISDSAKDFIRH 255
Query: 616 MLESNPDLRFSAEDVLDHPWL 636
++E +P+ RF+ E L HPW+
Sbjct: 256 LMEKDPEKRFTCEQALQHPWI 276
>pdb|2JAM|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
pdb|2JAM|B Chain B, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
Length = 304
Score = 224 bits (571), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 111/256 (43%), Positives = 163/256 (63%), Gaps = 5/256 (1%)
Query: 383 QIIGDGNFAVVRQVYDKHKDMDCALKIIDKSKLLGKKQMIENEVNILRSVNHPNIIKLLD 442
+++G G F+ V V + ALK I KS + +ENE+ +L+ + H NI+ L D
Sbjct: 15 EVLGSGAFSEVFLVKQRLTGKLFALKCIKKSPAF-RDSSLENEIAVLKKIKHENIVTLED 73
Query: 443 EYDTNNELYLVIELIKGGDLFDAISKNVKFSEEDSKFMTQSLASALSYLHDNYIVHRDIK 502
Y++ YLV++L+ GG+LFD I + ++E+D+ + Q + SA+ YLH+N IVHRD+K
Sbjct: 74 IYESTTHYYLVMQLVSGGELFDRILERGVYTEKDASLVIQQVLSAVKYLHENGIVHRDLK 133
Query: 503 PENLLVEMSGCHVKVLKVGDFGLAQRVLRP-MFTVCGTPTYVAPEILNESGYGVKIDVWA 561
PENLL + K++ + DFGL++ M T CGTP YVAPE+L + Y +D W+
Sbjct: 134 PENLLYLTPEENSKIM-ITDFGLSKMEQNGIMSTACGTPGYVAPEVLAQKPYSKAVDCWS 192
Query: 562 AGVILYILLCGFPPFVSDTNDQDELFDDILSGQYGFPSPYWDDISEEAKELISHMLESNP 621
GVI YILLCG+PPF +T + +LF+ I G Y F SP+WDDISE AK+ I H+LE +P
Sbjct: 193 IGVITYILLCGYPPFYEET--ESKLFEKIKEGYYEFESPFWDDISESAKDFICHLLEKDP 250
Query: 622 DLRFSAEDVLDHPWLE 637
+ R++ E L HPW++
Sbjct: 251 NERYTCEKALSHPWID 266
>pdb|2JC6|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
pdb|2JC6|C Chain C, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
Length = 334
Score = 223 bits (569), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 112/260 (43%), Positives = 163/260 (62%), Gaps = 5/260 (1%)
Query: 379 YSVGQIIGDGNFAVVRQVYDKHKDMDCALKIIDKSKLLGKKQMIENEVNILRSVNHPNII 438
+ + +G G F+ V +K A+K I K L GK+ IENE+ +LR + H NI+
Sbjct: 24 FEFKETLGTGAFSEVVLAEEKATGKLFAVKCIPKKALKGKESSIENEIAVLRKIKHENIV 83
Query: 439 KLLDEYDTNNELYLVIELIKGGDLFDAISKNVKFSEEDSKFMTQSLASALSYLHDNYIVH 498
L D Y++ N LYLV++L+ GG+LFD I + ++E+D+ + + + A+ YLH IVH
Sbjct: 84 ALEDIYESPNHLYLVMQLVSGGELFDRIVEKGFYTEKDASTLIRQVLDAVYYLHRMGIVH 143
Query: 499 RDIKPENLLVEMSGCHVKVLKVGDFGLAQRVLRP--MFTVCGTPTYVAPEILNESGYGVK 556
RD+KPENLL K++ + DFGL++ + M T CGTP YVAPE+L + Y
Sbjct: 144 RDLKPENLLYYSQDEESKIM-ISDFGLSKMEGKGDVMSTACGTPGYVAPEVLAQKPYSKA 202
Query: 557 IDVWAAGVILYILLCGFPPFVSDTNDQDELFDDILSGQYGFPSPYWDDISEEAKELISHM 616
+D W+ GVI YILLCG+PPF D ND +LF+ IL +Y F SPYWDDIS+ AK+ I ++
Sbjct: 203 VDCWSIGVIAYILLCGYPPFY-DENDS-KLFEQILKAEYEFDSPYWDDISDSAKDFIRNL 260
Query: 617 LESNPDLRFSAEDVLDHPWL 636
+E +P+ R++ E HPW+
Sbjct: 261 MEKDPNKRYTCEQAARHPWI 280
>pdb|2V7O|A Chain A, Crystal Structure Of Human Calcium-Calmodulin-Dependent
Protein Kinase Ii Gamma
Length = 336
Score = 214 bits (546), Expect = 8e-56, Method: Compositional matrix adjust.
Identities = 110/262 (41%), Positives = 157/262 (59%), Gaps = 7/262 (2%)
Query: 379 YSVGQIIGDGNFAVVRQVYDKHKDMDCALKIIDKSKLLGK-KQMIENEVNILRSVNHPNI 437
Y + + +G G F+VVR+ K + A KII+ KL + Q +E E I R + HPNI
Sbjct: 33 YQLFEELGKGAFSVVRRCVKKTPTQEYAAKIINTKKLSARDHQKLEREARICRLLKHPNI 92
Query: 438 IKLLDEYDTNNELYLVIELIKGGDLFDAISKNVKFSEEDSKFMTQSLASALSYLHDNYIV 497
++L D YLV +L+ GG+LF+ I +SE D+ + +++++H + IV
Sbjct: 93 VRLHDSISEEGFHYLVFDLVTGGELFEDIVAREYYSEADASHCIHQILESVNHIHQHDIV 152
Query: 498 HRDIKPENLLVEMSGCHVKVLKVGDFGLA---QRVLRPMFTVCGTPTYVAPEILNESGYG 554
HRD+KPENLL+ S C +K+ DFGLA Q + F GTP Y++PE+L + YG
Sbjct: 153 HRDLKPENLLL-ASKCKGAAVKLADFGLAIEVQGEQQAWFGFAGTPGYLSPEVLRKDPYG 211
Query: 555 VKIDVWAAGVILYILLCGFPPFVSDTNDQDELFDDILSGQYGFPSPYWDDISEEAKELIS 614
+D+WA GVILYILL G+PPF + DQ +L+ I +G Y FPSP WD ++ EAK LI+
Sbjct: 212 KPVDIWACGVILYILLVGYPPFWDE--DQHKLYQQIKAGAYDFPSPEWDTVTPEAKNLIN 269
Query: 615 HMLESNPDLRFSAEDVLDHPWL 636
ML NP R +A+ L HPW+
Sbjct: 270 QMLTINPAKRITADQALKHPWV 291
>pdb|3BHH|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|C Chain C, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|D Chain D, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
Length = 295
Score = 210 bits (535), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 110/262 (41%), Positives = 153/262 (58%), Gaps = 7/262 (2%)
Query: 379 YSVGQIIGDGNFAVVRQVYDKHKDMDCALKIIDKSKLLGK-KQMIENEVNILRSVNHPNI 437
Y + + IG G F+VVR+ + A KII+ KL + Q +E E I R + H NI
Sbjct: 6 YQLYEDIGKGAFSVVRRCVKLCTGHEYAAKIINTKKLSARDHQKLEREARICRLLKHSNI 65
Query: 438 IKLLDEYDTNNELYLVIELIKGGDLFDAISKNVKFSEEDSKFMTQSLASALSYLHDNYIV 497
++L D YLV +L+ GG+LF+ I +SE D+ Q + A+ + H +V
Sbjct: 66 VRLHDSISEEGFHYLVFDLVTGGELFEDIVAREYYSEADASHCIQQILEAVLHCHQMGVV 125
Query: 498 HRDIKPENLLVEMSGCHVKVLKVGDFGLAQRV---LRPMFTVCGTPTYVAPEILNESGYG 554
HRD+KPENLL+ S C +K+ DFGLA V + F GTP Y++PE+L + YG
Sbjct: 126 HRDLKPENLLL-ASKCKGAAVKLADFGLAIEVQGDQQAWFGFAGTPGYLSPEVLRKEAYG 184
Query: 555 VKIDVWAAGVILYILLCGFPPFVSDTNDQDELFDDILSGQYGFPSPYWDDISEEAKELIS 614
+D+WA GVILYILL G+PPF + DQ +L+ I +G Y FPSP WD ++ EAK LI+
Sbjct: 185 KPVDIWACGVILYILLVGYPPFWDE--DQHKLYQQIKAGAYDFPSPEWDTVTPEAKNLIN 242
Query: 615 HMLESNPDLRFSAEDVLDHPWL 636
ML NP R +A + L HPW+
Sbjct: 243 QMLTINPAKRITAHEALKHPWV 264
>pdb|2BDW|A Chain A, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
pdb|2BDW|B Chain B, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
Length = 362
Score = 209 bits (533), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 110/271 (40%), Positives = 156/271 (57%), Gaps = 6/271 (2%)
Query: 369 LNIPSKLLQRYSVGQIIGDGNFAVVRQVYDKHKDMDCALKIIDKSKLLGKK-QMIENEVN 427
+N +K Y V + +G G F+VVR+ K ++ A KII+ KL + Q +E E
Sbjct: 21 MNASTKFSDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREAR 80
Query: 428 ILRSVNHPNIIKLLDEYDTNNELYLVIELIKGGDLFDAISKNVKFSEEDSKFMTQSLASA 487
I R + HPNI++L D + YLV +L+ GG+LF+ I +SE D+ Q + +
Sbjct: 81 ICRKLQHPNIVRLHDSIQEESFHYLVFDLVTGGELFEDIVAREFYSEADASHCIQQILES 140
Query: 488 LSYLHDNYIVHRDIKPENLLVEMSGCHVKVLKVGDFGLAQRV--LRPMFTVCGTPTYVAP 545
++Y H N IVHR++KPENLL+ S +K+ DFGLA V GTP Y++P
Sbjct: 141 IAYCHSNGIVHRNLKPENLLL-ASKAKGAAVKLADFGLAIEVNDSEAWHGFAGTPGYLSP 199
Query: 546 EILNESGYGVKIDVWAAGVILYILLCGFPPFVSDTNDQDELFDDILSGQYGFPSPYWDDI 605
E+L + Y +D+WA GVILYILL G+PPF + DQ L+ I +G Y +PSP WD +
Sbjct: 200 EVLKKDPYSKPVDIWACGVILYILLVGYPPFWDE--DQHRLYAQIKAGAYDYPSPEWDTV 257
Query: 606 SEEAKELISHMLESNPDLRFSAEDVLDHPWL 636
+ EAK LI ML NP R +A+ L PW+
Sbjct: 258 TPEAKSLIDSMLTVNPKKRITADQALKVPWI 288
>pdb|2WEL|A Chain A, Crystal Structure Of Su6656-Bound CalciumCALMODULIN-
Dependent Protein Kinase Ii Delta In Complex With
Calmodulin
Length = 327
Score = 209 bits (533), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 110/262 (41%), Positives = 155/262 (59%), Gaps = 7/262 (2%)
Query: 379 YSVGQIIGDGNFAVVRQVYDKHKDMDCALKIIDKSKLLGK-KQMIENEVNILRSVNHPNI 437
Y + + +G G F+VVR+ + A KII+ KL + Q +E E I R + HPNI
Sbjct: 6 YQLFEELGKGAFSVVRRCMKIPTGQEYAAKIINTKKLSARDHQKLEREARICRLLKHPNI 65
Query: 438 IKLLDEYDTNNELYLVIELIKGGDLFDAISKNVKFSEEDSKFMTQSLASALSYLHDNYIV 497
++L D YLV +L+ GG+LF+ I +SE D+ Q + ++++ H N IV
Sbjct: 66 VRLHDSISEEGFHYLVFDLVTGGELFEDIVAREYYSEADASHCIQQILESVNHCHLNGIV 125
Query: 498 HRDIKPENLLVEMSGCHVKVLKVGDFGLAQRV---LRPMFTVCGTPTYVAPEILNESGYG 554
HRD+KPENLL+ S +K+ DFGLA V + F GTP Y++PE+L + YG
Sbjct: 126 HRDLKPENLLL-ASKSKGAAVKLADFGLAIEVQGDQQAWFGFAGTPGYLSPEVLRKDPYG 184
Query: 555 VKIDVWAAGVILYILLCGFPPFVSDTNDQDELFDDILSGQYGFPSPYWDDISEEAKELIS 614
+D+WA GVILYILL G+PPF + DQ L+ I +G Y FPSP WD ++ EAK+LI+
Sbjct: 185 KPVDMWACGVILYILLVGYPPFWDE--DQHRLYQQIKAGAYDFPSPEWDTVTPEAKDLIN 242
Query: 615 HMLESNPDLRFSAEDVLDHPWL 636
ML NP R +A + L HPW+
Sbjct: 243 KMLTINPAKRITASEALKHPWI 264
>pdb|2VN9|A Chain A, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
pdb|2VN9|B Chain B, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
Length = 301
Score = 209 bits (531), Expect = 5e-54, Method: Compositional matrix adjust.
Identities = 110/262 (41%), Positives = 155/262 (59%), Gaps = 7/262 (2%)
Query: 379 YSVGQIIGDGNFAVVRQVYDKHKDMDCALKIIDKSKLLGK-KQMIENEVNILRSVNHPNI 437
Y + + +G G F+VVR+ + A KII+ KL + Q +E E I R + HPNI
Sbjct: 6 YQLFEELGKGAFSVVRRCMKIPTGQEYAAKIINTKKLSARDHQKLEREARICRLLKHPNI 65
Query: 438 IKLLDEYDTNNELYLVIELIKGGDLFDAISKNVKFSEEDSKFMTQSLASALSYLHDNYIV 497
++L D YLV +L+ GG+LF+ I +SE D+ Q + ++++ H N IV
Sbjct: 66 VRLHDSISEEGFHYLVFDLVTGGELFEDIVAREYYSEADASHCIQQILESVNHCHLNGIV 125
Query: 498 HRDIKPENLLVEMSGCHVKVLKVGDFGLAQRV---LRPMFTVCGTPTYVAPEILNESGYG 554
HRD+KPENLL+ S +K+ DFGLA V + F GTP Y++PE+L + YG
Sbjct: 126 HRDLKPENLLL-ASKSKGAAVKLADFGLAIEVQGDQQAWFGFAGTPGYLSPEVLRKDPYG 184
Query: 555 VKIDVWAAGVILYILLCGFPPFVSDTNDQDELFDDILSGQYGFPSPYWDDISEEAKELIS 614
+D+WA GVILYILL G+PPF + DQ L+ I +G Y FPSP WD ++ EAK+LI+
Sbjct: 185 KPVDMWACGVILYILLVGYPPFWDE--DQHRLYQQIKAGAYDFPSPEWDTVTPEAKDLIN 242
Query: 615 HMLESNPDLRFSAEDVLDHPWL 636
ML NP R +A + L HPW+
Sbjct: 243 KMLTINPAKRITASEALKHPWI 264
>pdb|2VZ6|A Chain A, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
pdb|2VZ6|B Chain B, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
Length = 313
Score = 207 bits (527), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 108/262 (41%), Positives = 153/262 (58%), Gaps = 7/262 (2%)
Query: 379 YSVGQIIGDGNFAVVRQVYDKHKDMDCALKIIDKSKLLGK-KQMIENEVNILRSVNHPNI 437
Y + + +G G F+VVR+ + A KII+ KL + Q +E E I R + HPNI
Sbjct: 24 YQLFEELGKGAFSVVRRCVKVLAGQEYAAKIINTKKLSARDHQKLEREARICRLLKHPNI 83
Query: 438 IKLLDEYDTNNELYLVIELIKGGDLFDAISKNVKFSEEDSKFMTQSLASALSYLHDNYIV 497
++L D YL+ +L+ GG+LF+ I +SE D+ Q + A+ + H +V
Sbjct: 84 VRLHDSISEEGHHYLIFDLVTGGELFEDIVAREYYSEADASHCIQQILEAVLHCHQMGVV 143
Query: 498 HRDIKPENLLVEMSGCHVKVLKVGDFGLAQRV---LRPMFTVCGTPTYVAPEILNESGYG 554
HRD+KPENLL+ S +K+ DFGLA V + F GTP Y++PE+L + YG
Sbjct: 144 HRDLKPENLLL-ASKLKGAAVKLADFGLAIEVEGEQQAWFGFAGTPGYLSPEVLRKDPYG 202
Query: 555 VKIDVWAAGVILYILLCGFPPFVSDTNDQDELFDDILSGQYGFPSPYWDDISEEAKELIS 614
+D+WA GVILYILL G+PPF + DQ L+ I +G Y FPSP WD ++ EAK+LI+
Sbjct: 203 KPVDLWACGVILYILLVGYPPFWDE--DQHRLYQQIKAGAYDFPSPEWDTVTPEAKDLIN 260
Query: 615 HMLESNPDLRFSAEDVLDHPWL 636
ML NP R +A + L HPW+
Sbjct: 261 KMLTINPSKRITAAEALKHPWI 282
>pdb|3SOA|A Chain A, Full-Length Human Camkii
Length = 444
Score = 206 bits (524), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 106/268 (39%), Positives = 155/268 (57%), Gaps = 7/268 (2%)
Query: 373 SKLLQRYSVGQIIGDGNFAVVRQVYDKHKDMDCALKIIDKSKLLGK-KQMIENEVNILRS 431
++ + Y + + +G G F+VVR+ + A II+ KL + Q +E E I R
Sbjct: 7 TRFTEEYQLFEELGKGAFSVVRRCVKVLAGQEYAAMIINTKKLSARDHQKLEREARICRL 66
Query: 432 VNHPNIIKLLDEYDTNNELYLVIELIKGGDLFDAISKNVKFSEEDSKFMTQSLASALSYL 491
+ HPNI++L D YL+ +L+ GG+LF+ I +SE D+ Q + A+ +
Sbjct: 67 LKHPNIVRLHDSISEEGHHYLIFDLVTGGELFEDIVAREYYSEADASHCIQQILEAVLHC 126
Query: 492 HDNYIVHRDIKPENLLVEMSGCHVKVLKVGDFGLAQRV---LRPMFTVCGTPTYVAPEIL 548
H +VHR++KPENLL+ S +K+ DFGLA V + F GTP Y++PE+L
Sbjct: 127 HQMGVVHRNLKPENLLL-ASKLKGAAVKLADFGLAIEVEGEQQAWFGFAGTPGYLSPEVL 185
Query: 549 NESGYGVKIDVWAAGVILYILLCGFPPFVSDTNDQDELFDDILSGQYGFPSPYWDDISEE 608
+ YG +D+WA GVILYILL G+PPF + DQ L+ I +G Y FPSP WD ++ E
Sbjct: 186 RKDPYGKPVDLWACGVILYILLVGYPPFWDE--DQHRLYQQIKAGAYDFPSPEWDTVTPE 243
Query: 609 AKELISHMLESNPDLRFSAEDVLDHPWL 636
AK+LI+ ML NP R +A + L HPW+
Sbjct: 244 AKDLINKMLTINPSKRITAAEALKHPWI 271
>pdb|3KK8|A Chain A, Camkii Substrate Complex A
Length = 284
Score = 206 bits (523), Expect = 4e-53, Method: Compositional matrix adjust.
Identities = 109/267 (40%), Positives = 154/267 (57%), Gaps = 6/267 (2%)
Query: 373 SKLLQRYSVGQIIGDGNFAVVRQVYDKHKDMDCALKIIDKSKLLGKK-QMIENEVNILRS 431
+K Y V + +G G F+VVR+ K ++ A KII+ KL + Q +E E I R
Sbjct: 2 TKFSDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRK 61
Query: 432 VNHPNIIKLLDEYDTNNELYLVIELIKGGDLFDAISKNVKFSEEDSKFMTQSLASALSYL 491
+ HPNI++L D + YLV +L+ GG+LF+ I +SE D+ Q + +++Y
Sbjct: 62 LQHPNIVRLHDSIQEESFHYLVFDLVTGGELFEDIVAREFYSEADASHCIQQILESIAYC 121
Query: 492 HDNYIVHRDIKPENLLVEMSGCHVKVLKVGDFGLAQRV--LRPMFTVCGTPTYVAPEILN 549
H N IVHR++KPENLL+ S +K+ DFGLA V GTP Y++PE+L
Sbjct: 122 HSNGIVHRNLKPENLLL-ASKAKGAAVKLADFGLAIEVNDSEAWHGFAGTPGYLSPEVLK 180
Query: 550 ESGYGVKIDVWAAGVILYILLCGFPPFVSDTNDQDELFDDILSGQYGFPSPYWDDISEEA 609
+ Y +D+WA GVILYILL G+PPF + DQ L+ I +G Y +PSP WD ++ EA
Sbjct: 181 KDPYSKPVDIWACGVILYILLVGYPPFWDE--DQHRLYAQIKAGAYDYPSPEWDTVTPEA 238
Query: 610 KELISHMLESNPDLRFSAEDVLDHPWL 636
K LI ML NP R +A+ L PW+
Sbjct: 239 KSLIDSMLTVNPKKRITADQALKVPWI 265
>pdb|2W4O|A Chain A, Crystal Structure Of Human Camk4 In Complex With 4-Amino(
Sulfamoyl-Phenylamino)-Triazole-Carbothioic Acid (2,6-
Difluoro-Phenyl)-Amide)
Length = 349
Score = 205 bits (522), Expect = 5e-53, Method: Compositional matrix adjust.
Identities = 106/260 (40%), Positives = 159/260 (61%), Gaps = 7/260 (2%)
Query: 379 YSVGQIIGDGNFAVVRQVYDKHKDMDCALKIIDKSKLLGKKQMIENEVNILRSVNHPNII 438
+ V +G G ++V + K ALK++ K+ K+++ E+ +L ++HPNII
Sbjct: 55 FEVESELGRGATSIVYRCKQKGTQKPYALKVLKKTV---DKKIVRTEIGVLLRLSHPNII 111
Query: 439 KLLDEYDTNNELYLVIELIKGGDLFDAISKNVKFSEEDSKFMTQSLASALSYLHDNYIVH 498
KL + ++T E+ LV+EL+ GG+LFD I + +SE D+ + + A++YLH+N IVH
Sbjct: 112 KLKEIFETPTEISLVLELVTGGELFDRIVEKGYYSERDAADAVKQILEAVAYLHENGIVH 171
Query: 499 RDIKPENLLVEMSGCHVKVLKVGDFGLAQRVLRP--MFTVCGTPTYVAPEILNESGYGVK 556
RD+KPENLL LK+ DFGL++ V M TVCGTP Y APEIL YG +
Sbjct: 172 RDLKPENLLYATPAPDAP-LKIADFGLSKIVEHQVLMKTVCGTPGYCAPEILRGCAYGPE 230
Query: 557 IDVWAAGVILYILLCGFPPFVSDTNDQDELFDDILSGQYGFPSPYWDDISEEAKELISHM 616
+D+W+ G+I YILLCGF PF + DQ +F IL+ +Y F SP+WD++S AK+L+ +
Sbjct: 231 VDMWSVGIITYILLCGFEPFYDERGDQF-MFRRILNCEYYFISPWWDEVSLNAKDLVRKL 289
Query: 617 LESNPDLRFSAEDVLDHPWL 636
+ +P R + L HPW+
Sbjct: 290 IVLDPKKRLTTFQALQHPWV 309
>pdb|3KL8|A Chain A, Camkiintide Inhibitor Complex
pdb|3KL8|C Chain C, Camkiintide Inhibitor Complex
pdb|3KL8|E Chain E, Camkiintide Inhibitor Complex
pdb|3KL8|G Chain G, Camkiintide Inhibitor Complex
pdb|3KL8|I Chain I, Camkiintide Inhibitor Complex
Length = 269
Score = 205 bits (522), Expect = 5e-53, Method: Compositional matrix adjust.
Identities = 109/267 (40%), Positives = 154/267 (57%), Gaps = 6/267 (2%)
Query: 373 SKLLQRYSVGQIIGDGNFAVVRQVYDKHKDMDCALKIIDKSKLLGKK-QMIENEVNILRS 431
+K Y V + +G G F+VVR+ K ++ A KII+ KL + Q +E E I R
Sbjct: 2 TKFSDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRK 61
Query: 432 VNHPNIIKLLDEYDTNNELYLVIELIKGGDLFDAISKNVKFSEEDSKFMTQSLASALSYL 491
+ HPNI++L D + YLV +L+ GG+LF+ I +SE D+ Q + +++Y
Sbjct: 62 LQHPNIVRLHDSIQEESFHYLVFDLVTGGELFEDIVAREFYSEADASHCIQQILESIAYC 121
Query: 492 HDNYIVHRDIKPENLLVEMSGCHVKVLKVGDFGLAQRV--LRPMFTVCGTPTYVAPEILN 549
H N IVHR++KPENLL+ S +K+ DFGLA V GTP Y++PE+L
Sbjct: 122 HSNGIVHRNLKPENLLL-ASKAKGAAVKLADFGLAIEVNDSEAWHGFAGTPGYLSPEVLK 180
Query: 550 ESGYGVKIDVWAAGVILYILLCGFPPFVSDTNDQDELFDDILSGQYGFPSPYWDDISEEA 609
+ Y +D+WA GVILYILL G+PPF + DQ L+ I +G Y +PSP WD ++ EA
Sbjct: 181 KDPYSKPVDIWACGVILYILLVGYPPFWDE--DQHRLYAQIKAGAYDYPSPEWDTVTPEA 238
Query: 610 KELISHMLESNPDLRFSAEDVLDHPWL 636
K LI ML NP R +A+ L PW+
Sbjct: 239 KSLIDSMLTVNPKKRITADQALKVPWI 265
>pdb|3KK9|A Chain A, Camkii Substrate Complex B
Length = 282
Score = 205 bits (522), Expect = 5e-53, Method: Compositional matrix adjust.
Identities = 109/267 (40%), Positives = 154/267 (57%), Gaps = 6/267 (2%)
Query: 373 SKLLQRYSVGQIIGDGNFAVVRQVYDKHKDMDCALKIIDKSKLLGKK-QMIENEVNILRS 431
+K Y V + +G G F+VVR+ K ++ A KII+ KL + Q +E E I R
Sbjct: 1 TKFSDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRK 60
Query: 432 VNHPNIIKLLDEYDTNNELYLVIELIKGGDLFDAISKNVKFSEEDSKFMTQSLASALSYL 491
+ HPNI++L D + YLV +L+ GG+LF+ I +SE D+ Q + +++Y
Sbjct: 61 LQHPNIVRLHDSIQEESFHYLVFDLVTGGELFEDIVAREFYSEADASHCIQQILESIAYC 120
Query: 492 HDNYIVHRDIKPENLLVEMSGCHVKVLKVGDFGLAQRV--LRPMFTVCGTPTYVAPEILN 549
H N IVHR++KPENLL+ S +K+ DFGLA V GTP Y++PE+L
Sbjct: 121 HSNGIVHRNLKPENLLL-ASKAKGAAVKLADFGLAIEVNDSEAWHGFAGTPGYLSPEVLK 179
Query: 550 ESGYGVKIDVWAAGVILYILLCGFPPFVSDTNDQDELFDDILSGQYGFPSPYWDDISEEA 609
+ Y +D+WA GVILYILL G+PPF + DQ L+ I +G Y +PSP WD ++ EA
Sbjct: 180 KDPYSKPVDIWACGVILYILLVGYPPFWDE--DQHRLYAQIKAGAYDYPSPEWDTVTPEA 237
Query: 610 KELISHMLESNPDLRFSAEDVLDHPWL 636
K LI ML NP R +A+ L PW+
Sbjct: 238 KSLIDSMLTVNPKKRITADQALKVPWI 264
>pdb|3IGO|A Chain A, Crystal Structure Of Cryptosporidium Parvum Cdpk1,
Cgd3_920
pdb|3MWU|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Rm-1-95
pdb|3NCG|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Nm-Pp1
Length = 486
Score = 201 bits (511), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 108/278 (38%), Positives = 169/278 (60%), Gaps = 11/278 (3%)
Query: 366 RENLNIPSKLLQRYSVGQIIGDGNFAVVRQVYDKHKDMDCALKIIDKSKLLGK-KQMIEN 424
RENL +RY++ ++G G+F V + D+ + A+K+I+K+ K I
Sbjct: 11 RENLYFQGTFAERYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILR 70
Query: 425 EVNILRSVNHPNIIKLLDEYDTNNELYLVIELIKGGDLFDAISKNVKFSEEDSKFMTQSL 484
EV +L+ ++HPNI+KL + + ++ Y+V EL GG+LFD I K +FSE D+ + + +
Sbjct: 71 EVELLKKLDHPNIMKLFEILEDSSSFYIVGELYTGGELFDEIIKRKRFSEHDAARIIKQV 130
Query: 485 ASALSYLHDNYIVHRDIKPENLLVEM--SGCHVKVLKVGDFGLAQRVLR--PMFTVCGTP 540
S ++Y+H + IVHRD+KPEN+L+E C +K++ DFGL+ + M GT
Sbjct: 131 FSGITYMHKHNIVHRDLKPENILLESKEKDCDIKII---DFGLSTCFQQNTKMKDRIGTA 187
Query: 541 TYVAPEILNESGYGVKIDVWAAGVILYILLCGFPPFVSDTNDQDELFDDILSGQYGFPSP 600
Y+APE+L + Y K DVW+AGVILYILL G PPF ++ ++ + +G+Y F P
Sbjct: 188 YYIAPEVLRGT-YDEKCDVWSAGVILYILLSGTPPFYG--KNEYDILKRVETGKYAFDLP 244
Query: 601 YWDDISEEAKELISHMLESNPDLRFSAEDVLDHPWLER 638
W IS++AK+LI ML +P LR +A L+HPW+++
Sbjct: 245 QWRTISDDAKDLIRKMLTFHPSLRITATQCLEHPWIQK 282
>pdb|3DFA|A Chain A, Crystal Structure Of Kinase Domain Of Calcium-dependent
Protein Kinase Cgd3_920 From Cryptosporidium Parvum
Length = 286
Score = 200 bits (509), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 108/278 (38%), Positives = 169/278 (60%), Gaps = 11/278 (3%)
Query: 366 RENLNIPSKLLQRYSVGQIIGDGNFAVVRQVYDKHKDMDCALKIIDKSKLLGK-KQMIEN 424
RENL +RY++ ++G G+F V + D+ + A+K+I+K+ K I
Sbjct: 11 RENLYFQGTFAERYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILR 70
Query: 425 EVNILRSVNHPNIIKLLDEYDTNNELYLVIELIKGGDLFDAISKNVKFSEEDSKFMTQSL 484
EV +L+ ++HPNI+KL + + ++ Y+V EL GG+LFD I K +FSE D+ + + +
Sbjct: 71 EVELLKKLDHPNIMKLFEILEDSSSFYIVGELYTGGELFDEIIKRKRFSEHDAARIIKQV 130
Query: 485 ASALSYLHDNYIVHRDIKPENLLVEM--SGCHVKVLKVGDFGLAQRVLR--PMFTVCGTP 540
S ++Y+H + IVHRD+KPEN+L+E C +K++ DFGL+ + M GT
Sbjct: 131 FSGITYMHKHNIVHRDLKPENILLESKEKDCDIKII---DFGLSTCFQQNTKMKDRIGTA 187
Query: 541 TYVAPEILNESGYGVKIDVWAAGVILYILLCGFPPFVSDTNDQDELFDDILSGQYGFPSP 600
Y+APE+L + Y K DVW+AGVILYILL G PPF ++ ++ + +G+Y F P
Sbjct: 188 YYIAPEVLRGT-YDEKCDVWSAGVILYILLSGTPPFYG--KNEYDILKRVETGKYAFDLP 244
Query: 601 YWDDISEEAKELISHMLESNPDLRFSAEDVLDHPWLER 638
W IS++AK+LI ML +P LR +A L+HPW+++
Sbjct: 245 QWRTISDDAKDLIRKMLTFHPSLRITATQCLEHPWIQK 282
>pdb|2WEI|A Chain A, Crystal Structure Of The Kinase Domain Of Cryptosporidium
Parvum Calcium Dependent Protein Kinase In Complex With
3- Mb-Pp1
Length = 287
Score = 200 bits (509), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 108/278 (38%), Positives = 169/278 (60%), Gaps = 11/278 (3%)
Query: 366 RENLNIPSKLLQRYSVGQIIGDGNFAVVRQVYDKHKDMDCALKIIDKSKLLGK-KQMIEN 424
RENL +RY++ ++G G+F V + D+ + A+K+I+K+ K I
Sbjct: 11 RENLYFQGTFAERYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILR 70
Query: 425 EVNILRSVNHPNIIKLLDEYDTNNELYLVIELIKGGDLFDAISKNVKFSEEDSKFMTQSL 484
EV +L+ ++HPNI+KL + + ++ Y+V EL GG+LFD I K +FSE D+ + + +
Sbjct: 71 EVELLKKLDHPNIMKLFEILEDSSSFYIVGELYTGGELFDEIIKRKRFSEHDAARIIKQV 130
Query: 485 ASALSYLHDNYIVHRDIKPENLLVEM--SGCHVKVLKVGDFGLAQRVLR--PMFTVCGTP 540
S ++Y+H + IVHRD+KPEN+L+E C +K++ DFGL+ + M GT
Sbjct: 131 FSGITYMHKHNIVHRDLKPENILLESKEKDCDIKII---DFGLSTCFQQNTKMKDRIGTA 187
Query: 541 TYVAPEILNESGYGVKIDVWAAGVILYILLCGFPPFVSDTNDQDELFDDILSGQYGFPSP 600
Y+APE+L + Y K DVW+AGVILYILL G PPF ++ ++ + +G+Y F P
Sbjct: 188 YYIAPEVLRGT-YDEKCDVWSAGVILYILLSGTPPFYG--KNEYDILKRVETGKYAFDLP 244
Query: 601 YWDDISEEAKELISHMLESNPDLRFSAEDVLDHPWLER 638
W IS++AK+LI ML +P LR +A L+HPW+++
Sbjct: 245 QWRTISDDAKDLIRKMLTFHPSLRITATQCLEHPWIQK 282
>pdb|3DXN|A Chain A, Crystal Structure Of The Calcium-dependent Kinase From
Toxoplasma Gondii, 541.m00134, Kinase Domain
Length = 287
Score = 199 bits (506), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 113/275 (41%), Positives = 162/275 (58%), Gaps = 9/275 (3%)
Query: 366 RENLNIPSKLLQRYSVGQIIGDGNFAVVRQVYDKHKDMDCALKIIDKSKLL--GKKQMIE 423
RENL L RY + +G G + V DK + A+KII KS + +
Sbjct: 11 RENLYFQG-LSDRYQRVKKLGSGAYGEVLLCKDKLTGAERAIKIIKKSSVTTTSNSGALL 69
Query: 424 NEVNILRSVNHPNIIKLLDEYDTNNELYLVIELIKGGDLFDAISKNVKFSEEDSKFMTQS 483
+EV +L+ ++HPNI+KL + ++ YLV+E+ +GG+LFD I KFSE D+ + +
Sbjct: 70 DEVAVLKQLDHPNIMKLYEFFEDKRNYYLVMEVYRGGELFDEIILRQKFSEVDAAVIMKQ 129
Query: 484 LASALSYLHDNYIVHRDIKPENLLVEMSGCHVKVLKVGDFGLAQR--VLRPMFTVCGTPT 541
+ S +YLH + IVHRD+KPENLL+E S ++K+ DFGL+ V M GT
Sbjct: 130 VLSGTTYLHKHNIVHRDLKPENLLLE-SKSRDALIKIVDFGLSAHFEVGGKMKERLGTAY 188
Query: 542 YVAPEILNESGYGVKIDVWAAGVILYILLCGFPPFVSDTNDQDELFDDILSGQYGFPSPY 601
Y+APE+L + Y K DVW+ GVILYILLCG+PPF T+ E+ + G++ F P
Sbjct: 189 YIAPEVLRKK-YDEKCDVWSCGVILYILLCGYPPFGGQTD--QEILKRVEKGKFSFDPPD 245
Query: 602 WDDISEEAKELISHMLESNPDLRFSAEDVLDHPWL 636
W +S+EAK+L+ ML P R SAE+ L+HPW+
Sbjct: 246 WTQVSDEAKQLVKLMLTYEPSKRISAEEALNHPWI 280
>pdb|3MA6|A Chain A, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
pdb|3MA6|B Chain B, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
Length = 298
Score = 197 bits (501), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 113/286 (39%), Positives = 165/286 (57%), Gaps = 18/286 (6%)
Query: 366 RENLNI--PSKLLQ--------RYSVGQIIGDGNFAVVRQVYDKHKDMDCALKIIDKSKL 415
RENL P +Q RY +++G G+F V DK +CA+K+I K ++
Sbjct: 11 RENLYFQGPGMFVQHSTAIFSDRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQV 70
Query: 416 LGK--KQMIENEVNILRSVNHPNIIKLLDEYDTNNELYLVIELIKGGDLFDAISKNVKFS 473
K K+ + EV +L+ ++HPNI+KL + ++ YLV E+ GG+LFD I +FS
Sbjct: 71 KQKTDKESLLREVQLLKQLDHPNIMKLYEFFEDKGYFYLVGEVYTGGELFDEIISRKRFS 130
Query: 474 EEDSKFMTQSLASALSYLHDNYIVHRDIKPENLLVEMSGCHVKVLKVGDFGLAQR--VLR 531
E D+ + + + S ++Y+H N IVHRD+KPENLL+E + ++ DFGL+ +
Sbjct: 131 EVDAARIIRQVLSGITYMHKNKIVHRDLKPENLLLESKSKDANI-RIIDFGLSTHFEASK 189
Query: 532 PMFTVCGTPTYVAPEILNESGYGVKIDVWAAGVILYILLCGFPPFVSDTNDQDELFDDIL 591
M GT Y+APE+L+ + Y K DVW+ GVILYILL G PPF + N+ D + +
Sbjct: 190 KMKDKIGTAYYIAPEVLHGT-YDEKCDVWSTGVILYILLSGCPPF-NGANEYD-ILKKVE 246
Query: 592 SGQYGFPSPYWDDISEEAKELISHMLESNPDLRFSAEDVLDHPWLE 637
G+Y F P W +SE AK+LI ML P +R SA D LDH W++
Sbjct: 247 KGKYTFELPQWKKVSESAKDLIRKMLTYVPSMRISARDALDHEWIQ 292
>pdb|3HX4|A Chain A, Crystal Structure Of Cdpk1 Of Toxoplasma Gondii,
Tgme49_101440, In Presence Of Calcium
Length = 508
Score = 197 bits (500), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 107/264 (40%), Positives = 158/264 (59%), Gaps = 8/264 (3%)
Query: 378 RYSVGQIIGDGNFAVVRQVYDKHKDMDCALKIIDKSKLLGK--KQMIENEVNILRSVNHP 435
RY +++G G+F V DK +CA+K+I K ++ K K+ + EV +L+ ++HP
Sbjct: 51 RYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHP 110
Query: 436 NIIKLLDEYDTNNELYLVIELIKGGDLFDAISKNVKFSEEDSKFMTQSLASALSYLHDNY 495
NI+KL + ++ YLV E+ GG+LFD I +FSE D+ + + + S ++Y+H N
Sbjct: 111 NIMKLYEFFEDKGYFYLVGEVYTGGELFDEIISRKRFSEVDAARIIRQVLSGITYMHKNK 170
Query: 496 IVHRDIKPENLLVEMSGCHVKVLKVGDFGLAQ--RVLRPMFTVCGTPTYVAPEILNESGY 553
IVHRD+KPENLL+E + ++ DFGL+ + M GT Y+APE+L+ + Y
Sbjct: 171 IVHRDLKPENLLLESKSKDANI-RIIDFGLSTHFEASKKMKDKIGTAYYIAPEVLHGT-Y 228
Query: 554 GVKIDVWAAGVILYILLCGFPPFVSDTNDQDELFDDILSGQYGFPSPYWDDISEEAKELI 613
K DVW+ GVILYILL G PPF + N+ D + + G+Y F P W +SE AK+LI
Sbjct: 229 DEKCDVWSTGVILYILLSGCPPF-NGANEYD-ILKKVEKGKYTFELPQWKKVSESAKDLI 286
Query: 614 SHMLESNPDLRFSAEDVLDHPWLE 637
ML P +R SA D LDH W++
Sbjct: 287 RKMLTYVPSMRISARDALDHEWIQ 310
>pdb|3KU2|A Chain A, Crystal Structure Of Inactivated Form Of Cdpk1 From
Toxoplasma Gondii, Tgme49.101440
Length = 507
Score = 197 bits (500), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 107/264 (40%), Positives = 158/264 (59%), Gaps = 8/264 (3%)
Query: 378 RYSVGQIIGDGNFAVVRQVYDKHKDMDCALKIIDKSKLLGK--KQMIENEVNILRSVNHP 435
RY +++G G+F V DK +CA+K+I K ++ K K+ + EV +L+ ++HP
Sbjct: 50 RYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHP 109
Query: 436 NIIKLLDEYDTNNELYLVIELIKGGDLFDAISKNVKFSEEDSKFMTQSLASALSYLHDNY 495
NI+KL + ++ YLV E+ GG+LFD I +FSE D+ + + + S ++Y+H N
Sbjct: 110 NIMKLYEFFEDKGYFYLVGEVYTGGELFDEIISRKRFSEVDAARIIRQVLSGITYMHKNK 169
Query: 496 IVHRDIKPENLLVEMSGCHVKVLKVGDFGLAQ--RVLRPMFTVCGTPTYVAPEILNESGY 553
IVHRD+KPENLL+E + ++ DFGL+ + M GT Y+APE+L+ + Y
Sbjct: 170 IVHRDLKPENLLLESKSKDANI-RIIDFGLSTHFEASKKMKDKIGTAYYIAPEVLHGT-Y 227
Query: 554 GVKIDVWAAGVILYILLCGFPPFVSDTNDQDELFDDILSGQYGFPSPYWDDISEEAKELI 613
K DVW+ GVILYILL G PPF + N+ D + + G+Y F P W +SE AK+LI
Sbjct: 228 DEKCDVWSTGVILYILLSGCPPF-NGANEYD-ILKKVEKGKYTFELPQWKKVSESAKDLI 285
Query: 614 SHMLESNPDLRFSAEDVLDHPWLE 637
ML P +R SA D LDH W++
Sbjct: 286 RKMLTYVPSMRISARDALDHEWIQ 309
>pdb|3I79|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1)
pdb|3I7B|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Nm-Pp1
pdb|3N51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor
Rm-1-95
pdb|3SX9|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-132
pdb|3SXF|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-89
pdb|3T3U|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-130
pdb|3T3V|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-87
pdb|3UPX|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1300
pdb|3UPZ|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumpless Bki Analog Uw1243
pdb|3V51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Rm-1-176
pdb|3V5P|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1288
pdb|3V5T|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1299
Length = 484
Score = 197 bits (500), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 107/264 (40%), Positives = 158/264 (59%), Gaps = 8/264 (3%)
Query: 378 RYSVGQIIGDGNFAVVRQVYDKHKDMDCALKIIDKSKLLGK--KQMIENEVNILRSVNHP 435
RY +++G G+F V DK +CA+K+I K ++ K K+ + EV +L+ ++HP
Sbjct: 27 RYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHP 86
Query: 436 NIIKLLDEYDTNNELYLVIELIKGGDLFDAISKNVKFSEEDSKFMTQSLASALSYLHDNY 495
NI+KL + ++ YLV E+ GG+LFD I +FSE D+ + + + S ++Y+H N
Sbjct: 87 NIMKLYEFFEDKGYFYLVGEVYTGGELFDEIISRKRFSEVDAARIIRQVLSGITYMHKNK 146
Query: 496 IVHRDIKPENLLVEMSGCHVKVLKVGDFGLAQ--RVLRPMFTVCGTPTYVAPEILNESGY 553
IVHRD+KPENLL+E + ++ DFGL+ + M GT Y+APE+L+ + Y
Sbjct: 147 IVHRDLKPENLLLESKSKDANI-RIIDFGLSTHFEASKKMKDKIGTAYYIAPEVLHGT-Y 204
Query: 554 GVKIDVWAAGVILYILLCGFPPFVSDTNDQDELFDDILSGQYGFPSPYWDDISEEAKELI 613
K DVW+ GVILYILL G PPF + N+ D + + G+Y F P W +SE AK+LI
Sbjct: 205 DEKCDVWSTGVILYILLSGCPPF-NGANEYD-ILKKVEKGKYTFELPQWKKVSESAKDLI 262
Query: 614 SHMLESNPDLRFSAEDVLDHPWLE 637
ML P +R SA D LDH W++
Sbjct: 263 RKMLTYVPSMRISARDALDHEWIQ 286
>pdb|3HZT|A Chain A, Crystal Structure Of Toxoplasma Gondii Cdpk3,
Tgme49_105860
Length = 467
Score = 196 bits (499), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 109/266 (40%), Positives = 158/266 (59%), Gaps = 8/266 (3%)
Query: 375 LLQRYSVGQIIGDGNFAVVRQVYDKHKDMDCALKIIDKSKLL--GKKQMIENEVNILRSV 432
L RY + +G G + V DK + A+KII KS + + +EV +L+ +
Sbjct: 2 LSDRYQRVKKLGSGAYGEVLLCKDKLTGAERAIKIIKKSSVTTTSNSGALLDEVAVLKQL 61
Query: 433 NHPNIIKLLDEYDTNNELYLVIELIKGGDLFDAISKNVKFSEEDSKFMTQSLASALSYLH 492
+HPNI+KL + ++ YLV+E+ +GG+LFD I KFSE D+ + + + S +YLH
Sbjct: 62 DHPNIMKLYEFFEDKRNYYLVMEVYRGGELFDEIILRQKFSEVDAAVIMKQVLSGTTYLH 121
Query: 493 DNYIVHRDIKPENLLVEMSGCHVKVLKVGDFGLAQ--RVLRPMFTVCGTPTYVAPEILNE 550
+ IVHRD+KPENLL+E S ++K+ DFGL+ V M GT Y+APE+L +
Sbjct: 122 KHNIVHRDLKPENLLLE-SKSRDALIKIVDFGLSAHFEVGGKMKERLGTAYYIAPEVLRK 180
Query: 551 SGYGVKIDVWAAGVILYILLCGFPPFVSDTNDQDELFDDILSGQYGFPSPYWDDISEEAK 610
Y K DVW+ GVILYILLCG+PPF T+ E+ + G++ F P W +S+EAK
Sbjct: 181 K-YDEKCDVWSCGVILYILLCGYPPFGGQTD--QEILKRVEKGKFSFDPPDWTQVSDEAK 237
Query: 611 ELISHMLESNPDLRFSAEDVLDHPWL 636
+L+ ML P R SAE+ L+HPW+
Sbjct: 238 QLVKLMLTYEPSKRISAEEALNHPWI 263
>pdb|2Y7J|A Chain A, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|B Chain B, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|C Chain C, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|D Chain D, Structure Of Human Phosphorylase Kinase, Gamma 2
Length = 365
Score = 196 bits (499), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 111/282 (39%), Positives = 174/282 (61%), Gaps = 24/282 (8%)
Query: 374 KLLQRYSVGQIIGDGNFAVVRQVYDKHKDMDCALKIID-KSKLLGKKQMIE------NEV 426
+ Q+Y +IG G +VVR+ + + A+KI++ ++ L +Q+ E E
Sbjct: 91 EFYQKYDPKDVIGRGVSSVVRRCVHRATGHEFAVKIMEVTAERLSPEQLEEVREATRRET 150
Query: 427 NILRSV-NHPNIIKLLDEYDTNNELYLVIELIKGGDLFDAISKNVKFSEEDSKFMTQSLA 485
+ILR V HP+II L+D Y++++ ++LV +L++ G+LFD +++ V SE++++ + +SL
Sbjct: 151 HILRQVAGHPHIITLIDSYESSSFMFLVFDLMRKGELFDYLTEKVALSEKETRSIMRSLL 210
Query: 486 SALSYLHDNYIVHRDIKPENLLVEMSGCHVKVLKVGDFGLAQRVLRP---MFTVCGTPTY 542
A+S+LH N IVHRD+KPEN+L++ + +++ DFG + L P + +CGTP Y
Sbjct: 211 EAVSFLHANNIVHRDLKPENILLDDN----MQIRLSDFGFSCH-LEPGEKLRELCGTPGY 265
Query: 543 VAPEILNES------GYGVKIDVWAAGVILYILLCGFPPFVSDTNDQDELFDDILSGQYG 596
+APEIL S GYG ++D+WA GVIL+ LL G PPF Q + I+ GQY
Sbjct: 266 LAPEILKCSMDETHPGYGKEVDLWACGVILFTLLAGSPPFWH--RRQILMLRMIMEGQYQ 323
Query: 597 FPSPYWDDISEEAKELISHMLESNPDLRFSAEDVLDHPWLER 638
F SP WDD S K+LIS +L+ +P+ R +AE L HP+ ER
Sbjct: 324 FSSPEWDDRSSTVKDLISRLLQVDPEARLTAEQALQHPFFER 365
>pdb|2W0J|A Chain A, Crystal Structure Of Chk2 In Complex With Nsc 109555, A
Specific Inhibitor
pdb|2W7X|A Chain A, Cellular Inhibition Of Checkpoint Kinase 2 And
Potentiation Of Cytotoxic Drugs By Novel Chk2 Inhibitor
Pv1019
pdb|2YIQ|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1322
pdb|2YIR|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1352
pdb|2YIT|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Pv1162, A Novel Inhibitor
pdb|2YCQ|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1115
pdb|2YCS|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Pv788
Length = 323
Score = 194 bits (493), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 107/282 (37%), Positives = 164/282 (58%), Gaps = 23/282 (8%)
Query: 372 PSKLLQRYSVGQIIGDGNFAVVRQVYDKHKDMDCALKIIDKSKL-LGKKQM------IEN 424
P L Y + + +G G V+ +++ A+KII K K +G + +E
Sbjct: 5 PKALRDEYIMSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVET 64
Query: 425 EVNILRSVNHPNIIKLLDEYDTNNELYLVIELIKGGDLFDAISKNVKFSEEDSKFMTQSL 484
E+ IL+ +NHP IIK+ + +D + Y+V+EL++GG+LFD + N + E K +
Sbjct: 65 EIEILKKLNHPCIIKIKNFFDAED-YYIVLELMEGGELFDKVVGNKRLKEATCKLYFYQM 123
Query: 485 ASALSYLHDNYIVHRDIKPENLLV--EMSGCHVKVLKVGDFG----LAQRVLRPMFTVCG 538
A+ YLH+N I+HRD+KPEN+L+ + C ++K+ DFG L + L M T+CG
Sbjct: 124 LLAVQYLHENGIIHRDLKPENVLLSSQEEDC---LIKITDFGHSKILGETSL--MRTLCG 178
Query: 539 TPTYVAPEIL---NESGYGVKIDVWAAGVILYILLCGFPPFVSDTNDQDELFDDILSGQY 595
TPTY+APE+L +GY +D W+ GVIL+I L G+PPF S+ Q L D I SG+Y
Sbjct: 179 TPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPF-SEHRTQVSLKDQITSGKY 237
Query: 596 GFPSPYWDDISEEAKELISHMLESNPDLRFSAEDVLDHPWLE 637
F W ++SE+A +L+ +L +P RF+ E+ L HPWL+
Sbjct: 238 NFIPEVWAEVSEKALDLVKKLLVVDPKARFTTEEALRHPWLQ 279
>pdb|2XK9|A Chain A, Structural Analysis Of Checkpoint Kinase 2 (Chk2) In
Complex With Inhibitor Pv1533
Length = 322
Score = 194 bits (493), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 107/282 (37%), Positives = 164/282 (58%), Gaps = 23/282 (8%)
Query: 372 PSKLLQRYSVGQIIGDGNFAVVRQVYDKHKDMDCALKIIDKSKL-LGKKQM------IEN 424
P L Y + + +G G V+ +++ A+KII K K +G + +E
Sbjct: 4 PKALRDEYIMSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVET 63
Query: 425 EVNILRSVNHPNIIKLLDEYDTNNELYLVIELIKGGDLFDAISKNVKFSEEDSKFMTQSL 484
E+ IL+ +NHP IIK+ + +D + Y+V+EL++GG+LFD + N + E K +
Sbjct: 64 EIEILKKLNHPCIIKIKNFFDAED-YYIVLELMEGGELFDKVVGNKRLKEATCKLYFYQM 122
Query: 485 ASALSYLHDNYIVHRDIKPENLLV--EMSGCHVKVLKVGDFG----LAQRVLRPMFTVCG 538
A+ YLH+N I+HRD+KPEN+L+ + C ++K+ DFG L + L M T+CG
Sbjct: 123 LLAVQYLHENGIIHRDLKPENVLLSSQEEDC---LIKITDFGHSKILGETSL--MRTLCG 177
Query: 539 TPTYVAPEIL---NESGYGVKIDVWAAGVILYILLCGFPPFVSDTNDQDELFDDILSGQY 595
TPTY+APE+L +GY +D W+ GVIL+I L G+PPF S+ Q L D I SG+Y
Sbjct: 178 TPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPF-SEHRTQVSLKDQITSGKY 236
Query: 596 GFPSPYWDDISEEAKELISHMLESNPDLRFSAEDVLDHPWLE 637
F W ++SE+A +L+ +L +P RF+ E+ L HPWL+
Sbjct: 237 NFIPEVWAEVSEKALDLVKKLLVVDPKARFTTEEALRHPWLQ 278
>pdb|2YCF|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1531
Length = 322
Score = 194 bits (492), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 107/282 (37%), Positives = 164/282 (58%), Gaps = 23/282 (8%)
Query: 372 PSKLLQRYSVGQIIGDGNFAVVRQVYDKHKDMDCALKIIDKSKL-LGKKQM------IEN 424
P L Y + + +G G V+ +++ A+KII K K +G + +E
Sbjct: 5 PKALRDEYIMSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVET 64
Query: 425 EVNILRSVNHPNIIKLLDEYDTNNELYLVIELIKGGDLFDAISKNVKFSEEDSKFMTQSL 484
E+ IL+ +NHP IIK+ + +D + Y+V+EL++GG+LFD + N + E K +
Sbjct: 65 EIEILKKLNHPCIIKIKNFFDAED-YYIVLELMEGGELFDKVVGNKRLKEATCKLYFYQM 123
Query: 485 ASALSYLHDNYIVHRDIKPENLLV--EMSGCHVKVLKVGDFG----LAQRVLRPMFTVCG 538
A+ YLH+N I+HRD+KPEN+L+ + C ++K+ DFG L + L M T+CG
Sbjct: 124 LLAVQYLHENGIIHRDLKPENVLLSSQEEDC---LIKITDFGHSKILGETSL--MRTLCG 178
Query: 539 TPTYVAPEIL---NESGYGVKIDVWAAGVILYILLCGFPPFVSDTNDQDELFDDILSGQY 595
TPTY+APE+L +GY +D W+ GVIL+I L G+PPF S+ Q L D I SG+Y
Sbjct: 179 TPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPF-SEHRTQVSLKDQITSGKY 237
Query: 596 GFPSPYWDDISEEAKELISHMLESNPDLRFSAEDVLDHPWLE 637
F W ++SE+A +L+ +L +P RF+ E+ L HPWL+
Sbjct: 238 NFIPEVWAEVSEKALDLVKKLLVVDPKARFTTEEALRHPWLQ 279
>pdb|2YCR|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv976
Length = 323
Score = 194 bits (492), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 107/282 (37%), Positives = 164/282 (58%), Gaps = 23/282 (8%)
Query: 372 PSKLLQRYSVGQIIGDGNFAVVRQVYDKHKDMDCALKIIDKSKL-LGKKQM------IEN 424
P L Y + + +G G V+ +++ A+KII K K +G + +E
Sbjct: 5 PKALRDEYIMSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVET 64
Query: 425 EVNILRSVNHPNIIKLLDEYDTNNELYLVIELIKGGDLFDAISKNVKFSEEDSKFMTQSL 484
E+ IL+ +NHP IIK+ + +D + Y+V+EL++GG+LFD + N + E K +
Sbjct: 65 EIEILKKLNHPCIIKIKNFFDAED-YYIVLELMEGGELFDKVVGNKRLKEATCKLYFYQM 123
Query: 485 ASALSYLHDNYIVHRDIKPENLLV--EMSGCHVKVLKVGDFG----LAQRVLRPMFTVCG 538
A+ YLH+N I+HRD+KPEN+L+ + C ++K+ DFG L + L M T+CG
Sbjct: 124 LLAVQYLHENGIIHRDLKPENVLLSSQEEDC---LIKITDFGHSKILGETSL--MRTLCG 178
Query: 539 TPTYVAPEIL---NESGYGVKIDVWAAGVILYILLCGFPPFVSDTNDQDELFDDILSGQY 595
TPTY+APE+L +GY +D W+ GVIL+I L G+PPF S+ Q L D I SG+Y
Sbjct: 179 TPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPF-SEHRTQVSLKDQITSGKY 237
Query: 596 GFPSPYWDDISEEAKELISHMLESNPDLRFSAEDVLDHPWLE 637
F W ++SE+A +L+ +L +P RF+ E+ L HPWL+
Sbjct: 238 NFIPEVWAEVSEKALDLVKKLLVVDPKARFTTEEALRHPWLQ 279
>pdb|2CN5|A Chain A, Crystal Structure Of Human Chk2 In Complex With Adp
pdb|2CN8|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Debromohymenialdisine
pdb|2WTC|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTD|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTI|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XBJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XM8|A Chain A, Co-Crystal Structure Of A Small Molecule Inhibitor Bound
To The Kinase Domain Of Chk2
pdb|2XM9|A Chain A, Structure Of A Small Molecule Inhibitor With The Kinase
Domain Of Chk2
pdb|4A9R|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9S|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9T|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9U|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
Length = 329
Score = 193 bits (491), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 107/282 (37%), Positives = 164/282 (58%), Gaps = 23/282 (8%)
Query: 372 PSKLLQRYSVGQIIGDGNFAVVRQVYDKHKDMDCALKIIDKSKL-LGKKQM------IEN 424
P L Y + + +G G V+ +++ A+KII K K +G + +E
Sbjct: 11 PKALRDEYIMSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVET 70
Query: 425 EVNILRSVNHPNIIKLLDEYDTNNELYLVIELIKGGDLFDAISKNVKFSEEDSKFMTQSL 484
E+ IL+ +NHP IIK+ + +D + Y+V+EL++GG+LFD + N + E K +
Sbjct: 71 EIEILKKLNHPCIIKIKNFFDAED-YYIVLELMEGGELFDKVVGNKRLKEATCKLYFYQM 129
Query: 485 ASALSYLHDNYIVHRDIKPENLLV--EMSGCHVKVLKVGDFG----LAQRVLRPMFTVCG 538
A+ YLH+N I+HRD+KPEN+L+ + C ++K+ DFG L + L M T+CG
Sbjct: 130 LLAVQYLHENGIIHRDLKPENVLLSSQEEDC---LIKITDFGHSKILGETSL--MRTLCG 184
Query: 539 TPTYVAPEIL---NESGYGVKIDVWAAGVILYILLCGFPPFVSDTNDQDELFDDILSGQY 595
TPTY+APE+L +GY +D W+ GVIL+I L G+PPF S+ Q L D I SG+Y
Sbjct: 185 TPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPF-SEHRTQVSLKDQITSGKY 243
Query: 596 GFPSPYWDDISEEAKELISHMLESNPDLRFSAEDVLDHPWLE 637
F W ++SE+A +L+ +L +P RF+ E+ L HPWL+
Sbjct: 244 NFIPEVWAEVSEKALDLVKKLLVVDPKARFTTEEALRHPWLQ 285
>pdb|3RNY|A Chain A, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain
pdb|3RNY|B Chain B, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain
Length = 346
Score = 193 bits (490), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 100/265 (37%), Positives = 157/265 (59%), Gaps = 10/265 (3%)
Query: 379 YSVGQIIGDGNFAVVRQVYDKHKDMDCALKIIDKSKLLGKKQMIENEVNILRSVNHPNII 438
Y V + IG G+++ ++ K +M+ A+K+IDKSK + E E+ +LR HPNII
Sbjct: 29 YVVKETIGVGSYSECKRCVHKATNMEYAVKVIDKSK---RDPSEEIEI-LLRYGQHPNII 84
Query: 439 KLLDEYDTNNELYLVIELIKGGDLFDAISKNVKFSEEDSKFMTQSLASALSYLHDNYIVH 498
L D YD +YLV EL++GG+L D I + FSE ++ F+ ++ + YLH +VH
Sbjct: 85 TLKDVYDDGKHVYLVTELMRGGELLDKILRQKFFSEREASFVLHTIGKTVEYLHSQGVVH 144
Query: 499 RDIKPENLLVEMSGCHVKVLKVGDFGLAQRVLRP----MFTVCGTPTYVAPEILNESGYG 554
RD+KP N+L + + L++ DFG A++ LR + T C T +VAPE+L GY
Sbjct: 145 RDLKPSNILYVDESGNPECLRICDFGFAKQ-LRAENGLLMTPCYTANFVAPEVLKRQGYD 203
Query: 555 VKIDVWAAGVILYILLCGFPPFVSDTNDQ-DELFDDILSGQYGFPSPYWDDISEEAKELI 613
D+W+ G++LY +L G+ PF + +D +E+ I SG++ W+ +SE AK+L+
Sbjct: 204 EGCDIWSLGILLYTMLAGYTPFANGPSDTPEEILTRIGSGKFTLSGGNWNTVSETAKDLV 263
Query: 614 SHMLESNPDLRFSAEDVLDHPWLER 638
S ML +P R +A+ VL HPW+ +
Sbjct: 264 SKMLHVDPHQRLTAKQVLQHPWVTQ 288
>pdb|2WNT|A Chain A, Crystal Structure Of The Human Ribosomal Protein S6 Kinase
pdb|2WNT|B Chain B, Crystal Structure Of The Human Ribosomal Protein S6 Kinase
Length = 330
Score = 192 bits (489), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 104/278 (37%), Positives = 162/278 (58%), Gaps = 11/278 (3%)
Query: 367 ENLNIPSKLLQ-RYSVGQIIGDGNFAVVRQVYDKHKDMDCALKIIDKSKLLGKKQMIENE 425
ENL S + Y V + IG G+++ ++ K +M+ A+K+IDKSK + E E
Sbjct: 16 ENLYFQSMVFSDGYVVKETIGVGSYSECKRCVHKATNMEYAVKVIDKSK---RDPSEEIE 72
Query: 426 VNILRSVNHPNIIKLLDEYDTNNELYLVIELIKGGDLFDAISKNVKFSEEDSKFMTQSLA 485
+ +LR HPNII L D YD +YLV EL++GG+L D I + FSE ++ F+ ++
Sbjct: 73 I-LLRYGQHPNIITLKDVYDDGKHVYLVTELMRGGELLDKILRQKFFSEREASFVLHTIG 131
Query: 486 SALSYLHDNYIVHRDIKPENLLVEMSGCHVKVLKVGDFGLAQRVLRP----MFTVCGTPT 541
+ YLH +VHRD+KP N+L + + L++ DFG A++ LR + T C T
Sbjct: 132 KTVEYLHSQGVVHRDLKPSNILYVDESGNPECLRICDFGFAKQ-LRAENGLLMTPCYTAN 190
Query: 542 YVAPEILNESGYGVKIDVWAAGVILYILLCGFPPFVSDTNDQ-DELFDDILSGQYGFPSP 600
+VAPE+L GY D+W+ G++LY +L G+ PF + +D +E+ I SG++
Sbjct: 191 FVAPEVLKRQGYDEGCDIWSLGILLYTMLAGYTPFANGPSDTPEEILTRIGSGKFTLSGG 250
Query: 601 YWDDISEEAKELISHMLESNPDLRFSAEDVLDHPWLER 638
W+ +SE AK+L+S ML +P R +A+ VL HPW+ +
Sbjct: 251 NWNTVSETAKDLVSKMLHVDPHQRLTAKQVLQHPWVTQ 288
>pdb|3I6W|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|B Chain B, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|C Chain C, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|D Chain D, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|E Chain E, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|F Chain F, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|G Chain G, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|H Chain H, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
Length = 443
Score = 191 bits (485), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 106/282 (37%), Positives = 164/282 (58%), Gaps = 23/282 (8%)
Query: 372 PSKLLQRYSVGQIIGDGNFAVVRQVYDKHKDMDCALKIIDKSKL-LGKKQM------IEN 424
P L Y + + +G G V+ +++ A++II K K +G + +E
Sbjct: 144 PKALRDEYIMSKTLGSGACGEVKLAFERKTCKKVAIRIISKRKFAIGSAREADPALNVET 203
Query: 425 EVNILRSVNHPNIIKLLDEYDTNNELYLVIELIKGGDLFDAISKNVKFSEEDSKFMTQSL 484
E+ IL+ +NHP IIK+ + +D + Y+V+EL++GG+LFD + N + E K +
Sbjct: 204 EIEILKKLNHPCIIKIKNFFDAED-YYIVLELMEGGELFDKVVGNKRLKEATCKLYFYQM 262
Query: 485 ASALSYLHDNYIVHRDIKPENLLV--EMSGCHVKVLKVGDFG----LAQRVLRPMFTVCG 538
A+ YLH+N I+HRD+KPEN+L+ + C ++K+ DFG L + L M T+CG
Sbjct: 263 LLAVQYLHENGIIHRDLKPENVLLSSQEEDC---LIKITDFGHSKILGETSL--MRTLCG 317
Query: 539 TPTYVAPEIL---NESGYGVKIDVWAAGVILYILLCGFPPFVSDTNDQDELFDDILSGQY 595
TPTY+APE+L +GY +D W+ GVIL+I L G+PPF S+ Q L D I SG+Y
Sbjct: 318 TPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPF-SEHRTQVSLKDQITSGKY 376
Query: 596 GFPSPYWDDISEEAKELISHMLESNPDLRFSAEDVLDHPWLE 637
F W ++SE+A +L+ +L +P RF+ E+ L HPWL+
Sbjct: 377 NFIPEVWAEVSEKALDLVKKLLVVDPKARFTTEEALRHPWLQ 418
>pdb|3I6U|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6U|B Chain B, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
Length = 419
Score = 191 bits (484), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 106/282 (37%), Positives = 164/282 (58%), Gaps = 23/282 (8%)
Query: 372 PSKLLQRYSVGQIIGDGNFAVVRQVYDKHKDMDCALKIIDKSKL-LGKKQM------IEN 424
P L Y + + +G G V+ +++ A++II K K +G + +E
Sbjct: 130 PKALRDEYIMSKTLGSGACGEVKLAFERKTCKKVAIRIISKRKFAIGSAREADPALNVET 189
Query: 425 EVNILRSVNHPNIIKLLDEYDTNNELYLVIELIKGGDLFDAISKNVKFSEEDSKFMTQSL 484
E+ IL+ +NHP IIK+ + +D + Y+V+EL++GG+LFD + N + E K +
Sbjct: 190 EIEILKKLNHPCIIKIKNFFDAED-YYIVLELMEGGELFDKVVGNKRLKEATCKLYFYQM 248
Query: 485 ASALSYLHDNYIVHRDIKPENLLV--EMSGCHVKVLKVGDFG----LAQRVLRPMFTVCG 538
A+ YLH+N I+HRD+KPEN+L+ + C ++K+ DFG L + L M T+CG
Sbjct: 249 LLAVQYLHENGIIHRDLKPENVLLSSQEEDC---LIKITDFGHSKILGETSL--MRTLCG 303
Query: 539 TPTYVAPEIL---NESGYGVKIDVWAAGVILYILLCGFPPFVSDTNDQDELFDDILSGQY 595
TPTY+APE+L +GY +D W+ GVIL+I L G+PPF S+ Q L D I SG+Y
Sbjct: 304 TPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPF-SEHRTQVSLKDQITSGKY 362
Query: 596 GFPSPYWDDISEEAKELISHMLESNPDLRFSAEDVLDHPWLE 637
F W ++SE+A +L+ +L +P RF+ E+ L HPWL+
Sbjct: 363 NFIPEVWAEVSEKALDLVKKLLVVDPKARFTTEEALRHPWLQ 404
>pdb|3LIJ|A Chain A, Crystal Structure Of Full Length Cpcdpk3 (Cgd5_820) In
Complex With Ca2+ And Amppnp
Length = 494
Score = 191 bits (484), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 106/266 (39%), Positives = 160/266 (60%), Gaps = 7/266 (2%)
Query: 375 LLQRYSVGQIIGDGNFAVVRQVYDKHKDMDCALKIIDKSKL-LGKKQMIENEVNILRSVN 433
L + Y + +G G + V DK ++ A+KII K+ + + EV +L+ ++
Sbjct: 35 LSEMYQRVKKLGSGAYGEVLLCRDKVTHVERAIKIIRKTSVSTSSNSKLLEEVAVLKLLD 94
Query: 434 HPNIIKLLDEYDTNNELYLVIELIKGGDLFDAISKNVKFSEEDSKFMTQSLASALSYLHD 493
HPNI+KL D ++ YLV+E KGG+LFD I +KF+E D+ + + + S ++YLH
Sbjct: 95 HPNIMKLYDFFEDKRNYYLVMECYKGGELFDEIIHRMKFNEVDAAVIIKQVLSGVTYLHK 154
Query: 494 NYIVHRDIKPENLLVEMSGCHVKVLKVGDFGLAQ--RVLRPMFTVCGTPTYVAPEILNES 551
+ IVHRD+KPENLL+E S ++K+ DFGL+ + M GT Y+APE+L +
Sbjct: 155 HNIVHRDLKPENLLLE-SKEKDALIKIVDFGLSAVFENQKKMKERLGTAYYIAPEVLRKK 213
Query: 552 GYGVKIDVWAAGVILYILLCGFPPFVSDTNDQDELFDDILSGQYGFPSPYWDDISEEAKE 611
Y K DVW+ GVIL+ILL G+PPF T+ E+ + G+Y F SP W ++SE AK+
Sbjct: 214 -YDEKCDVWSIGVILFILLAGYPPFGGQTD--QEILRKVEKGKYTFDSPEWKNVSEGAKD 270
Query: 612 LISHMLESNPDLRFSAEDVLDHPWLE 637
LI ML+ + R SA+ L+HPW++
Sbjct: 271 LIKQMLQFDSQRRISAQQALEHPWIK 296
>pdb|2QR8|A Chain A, 2.0a X-ray Structure Of C-terminal Kinase Domain Of P90
Ribosomal S6 Kinase 2 (rsk2)
pdb|4D9U|A Chain A, Rsk2 C-Terminal Kinase Domain, (E)-Tert-Butyl
3-(4-Amino-7-(3-
Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
pdb|4D9T|A Chain A, Rsk2 C-Terminal Kinase Domain With Inhibitor (E)-Methyl
3-(4-Amino-7-
(3-Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
Length = 342
Score = 189 bits (479), Expect = 5e-48, Method: Compositional matrix adjust.
Identities = 101/263 (38%), Positives = 156/263 (59%), Gaps = 10/263 (3%)
Query: 379 YSVGQIIGDGNFAVVRQVYDKHKDMDCALKIIDKSKLLGKKQMIENEVNILRSVNHPNII 438
Y V + IG G+++V ++ K +M+ A+KIIDKSK + E E+ +LR HPNII
Sbjct: 24 YEVKEDIGVGSYSVCKRCIHKATNMEFAVKIIDKSK---RDPTEEIEI-LLRYGQHPNII 79
Query: 439 KLLDEYDTNNELYLVIELIKGGDLFDAISKNVKFSEEDSKFMTQSLASALSYLHDNYIVH 498
L D YD +Y+V EL+KGG+L D I + FSE ++ + ++ + YLH +VH
Sbjct: 80 TLKDVYDDGKYVYVVTELMKGGELLDKILRQKFFSEREASAVLFTITKTVEYLHAQGVVH 139
Query: 499 RDIKPENLLVEMSGCHVKVLKVGDFGLAQRVLRP----MFTVCGTPTYVAPEILNESGYG 554
RD+KP N+L + + +++ DFG A++ LR + T C T +VAPE+L GY
Sbjct: 140 RDLKPSNILYVDESGNPESIRICDFGFAKQ-LRAENGLLMTPCYTANFVAPEVLERQGYD 198
Query: 555 VKIDVWAAGVILYILLCGFPPFVSDTNDQ-DELFDDILSGQYGFPSPYWDDISEEAKELI 613
D+W+ GV+LY +L G+ PF + +D +E+ I SG++ YW+ +S+ AK+L+
Sbjct: 199 AACDIWSLGVLLYTMLTGYTPFANGPDDTPEEILARIGSGKFSLSGGYWNSVSDTAKDLV 258
Query: 614 SHMLESNPDLRFSAEDVLDHPWL 636
S ML +P R +A VL HPW+
Sbjct: 259 SKMLHVDPHQRLTAALVLRHPWI 281
>pdb|3I7C|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Na-Pp2
pdb|3NYV|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Non-Specific Inhibitor
Whi-P180
Length = 484
Score = 188 bits (477), Expect = 9e-48, Method: Compositional matrix adjust.
Identities = 105/264 (39%), Positives = 153/264 (57%), Gaps = 8/264 (3%)
Query: 378 RYSVGQIIGDGNFAVVRQVYDKHKDMDCALKIIDKSKLLGK--KQMIENEVNILRSVNHP 435
RY +++G G+F V DK +CA+K+I K ++ K K+ + EV +L+ ++HP
Sbjct: 27 RYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHP 86
Query: 436 NIIKLLDEYDTNNELYLVIELIKGGDLFDAISKNVKFSEEDSKFMTQSLASALSYLHDNY 495
NI KL + ++ YLV E+ GG+LFD I +FSE D+ + + + S ++Y H N
Sbjct: 87 NIXKLYEFFEDKGYFYLVGEVYTGGELFDEIISRKRFSEVDAARIIRQVLSGITYXHKNK 146
Query: 496 IVHRDIKPENLLVEMSGCHVKVLKVGDFGLAQ--RVLRPMFTVCGTPTYVAPEILNESGY 553
IVHRD+KPENLL+E + ++ DFGL+ + GT Y+APE+L+ + Y
Sbjct: 147 IVHRDLKPENLLLESKSKDANI-RIIDFGLSTHFEASKKXKDKIGTAYYIAPEVLHGT-Y 204
Query: 554 GVKIDVWAAGVILYILLCGFPPFVSDTNDQDELFDDILSGQYGFPSPYWDDISEEAKELI 613
K DVW+ GVILYILL G PPF + N+ D + + G+Y F P W +SE AK+LI
Sbjct: 205 DEKCDVWSTGVILYILLSGCPPF-NGANEYD-ILKKVEKGKYTFELPQWKKVSESAKDLI 262
Query: 614 SHMLESNPDLRFSAEDVLDHPWLE 637
L P R SA D LDH W++
Sbjct: 263 RKXLTYVPSXRISARDALDHEWIQ 286
>pdb|1QL6|A Chain A, The Catalytic Mechanism Of Phosphorylase Kinase Probed By
Mutational Studies
Length = 298
Score = 185 bits (470), Expect = 6e-47, Method: Compositional matrix adjust.
Identities = 109/282 (38%), Positives = 169/282 (59%), Gaps = 29/282 (10%)
Query: 377 QRYSVGQIIGDGNFAVVRQVYDKHKDMDCALKIID--------KSKLLGKKQMIENEVNI 428
+ Y +I+G G +VVR+ K + A+KIID ++ ++ EV+I
Sbjct: 17 ENYEPKEILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDI 76
Query: 429 LRSVN-HPNIIKLLDEYDTNNELYLVIELIKGGDLFDAISKNVKFSEEDSKFMTQSLASA 487
LR V+ HPNII+L D Y+TN +LV +L+K G+LFD +++ V SE++++ + ++L
Sbjct: 77 LRKVSGHPNIIQLKDTYETNTFFFLVFDLMKKGELFDYLTEKVTLSEKETRKIMRALLEV 136
Query: 488 LSYLHDNYIVHRDIKPENLLV--EMSGCHVKVLKVGDFGLAQRVLRP---MFTVCGTPTY 542
+ LH IVHRD+KPEN+L+ +M+ +K+ DFG + + L P + +VCGTP+Y
Sbjct: 137 ICALHKLNIVHRDLKPENILLDDDMN------IKLTDFGFSCQ-LDPGEKLRSVCGTPSY 189
Query: 543 VAPEIL------NESGYGVKIDVWAAGVILYILLCGFPPFVSDTNDQDELFDDILSGQYG 596
+APEI+ N GYG ++D+W+ GVI+Y LL G PPF Q + I+SG Y
Sbjct: 190 LAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPPFWH--RKQMLMLRMIMSGNYQ 247
Query: 597 FPSPYWDDISEEAKELISHMLESNPDLRFSAEDVLDHPWLER 638
F SP WDD S+ K+L+S L P R++AE+ L HP+ ++
Sbjct: 248 FGSPEWDDYSDTVKDLVSRFLVVQPQKRYTAEEALAHPFFQQ 289
>pdb|1PHK|A Chain A, Two Structures Of The Catalytic Domain Of Phosphorylase,
Kinase: An Active Protein Kinase Complexed With
Nucleotide, Substrate-Analogue And Product
Length = 298
Score = 184 bits (468), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 109/282 (38%), Positives = 168/282 (59%), Gaps = 29/282 (10%)
Query: 377 QRYSVGQIIGDGNFAVVRQVYDKHKDMDCALKIID--------KSKLLGKKQMIENEVNI 428
+ Y +I+G G +VVR+ K + A+KIID ++ ++ EV+I
Sbjct: 17 ENYEPKEILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDI 76
Query: 429 LRSVN-HPNIIKLLDEYDTNNELYLVIELIKGGDLFDAISKNVKFSEEDSKFMTQSLASA 487
LR V+ HPNII+L D Y+TN +LV +L+K G+LFD +++ V SE++++ + ++L
Sbjct: 77 LRKVSGHPNIIQLKDTYETNTFFFLVFDLMKKGELFDYLTEKVTLSEKETRKIMRALLEV 136
Query: 488 LSYLHDNYIVHRDIKPENLLV--EMSGCHVKVLKVGDFGLAQRVLRP---MFTVCGTPTY 542
+ LH IVHRD+KPEN+L+ +M+ +K+ DFG + + L P + VCGTP+Y
Sbjct: 137 ICALHKLNIVHRDLKPENILLDDDMN------IKLTDFGFSCQ-LDPGEKLREVCGTPSY 189
Query: 543 VAPEIL------NESGYGVKIDVWAAGVILYILLCGFPPFVSDTNDQDELFDDILSGQYG 596
+APEI+ N GYG ++D+W+ GVI+Y LL G PPF Q + I+SG Y
Sbjct: 190 LAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPPFWH--RKQMLMLRMIMSGNYQ 247
Query: 597 FPSPYWDDISEEAKELISHMLESNPDLRFSAEDVLDHPWLER 638
F SP WDD S+ K+L+S L P R++AE+ L HP+ ++
Sbjct: 248 FGSPEWDDYSDTVKDLVSRFLVVQPQKRYTAEEALAHPFFQQ 289
>pdb|2PHK|A Chain A, The Crystal Structure Of A Phosphorylase Kinase Peptide
Substrate Complex: Kinase Substrate Recognition
Length = 277
Score = 184 bits (467), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 109/282 (38%), Positives = 168/282 (59%), Gaps = 29/282 (10%)
Query: 377 QRYSVGQIIGDGNFAVVRQVYDKHKDMDCALKIID--------KSKLLGKKQMIENEVNI 428
+ Y +I+G G +VVR+ K + A+KIID ++ ++ EV+I
Sbjct: 4 ENYEPKEILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDI 63
Query: 429 LRSVN-HPNIIKLLDEYDTNNELYLVIELIKGGDLFDAISKNVKFSEEDSKFMTQSLASA 487
LR V+ HPNII+L D Y+TN +LV +L+K G+LFD +++ V SE++++ + ++L
Sbjct: 64 LRKVSGHPNIIQLKDTYETNTFFFLVFDLMKKGELFDYLTEKVTLSEKETRKIMRALLEV 123
Query: 488 LSYLHDNYIVHRDIKPENLLV--EMSGCHVKVLKVGDFGLAQRVLRP---MFTVCGTPTY 542
+ LH IVHRD+KPEN+L+ +M+ +K+ DFG + + L P + VCGTP+Y
Sbjct: 124 ICALHKLNIVHRDLKPENILLDDDMN------IKLTDFGFSCQ-LDPGEKLREVCGTPSY 176
Query: 543 VAPEIL------NESGYGVKIDVWAAGVILYILLCGFPPFVSDTNDQDELFDDILSGQYG 596
+APEI+ N GYG ++D+W+ GVI+Y LL G PPF Q + I+SG Y
Sbjct: 177 LAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPPFWH--RKQMLMLRMIMSGNYQ 234
Query: 597 FPSPYWDDISEEAKELISHMLESNPDLRFSAEDVLDHPWLER 638
F SP WDD S+ K+L+S L P R++AE+ L HP+ ++
Sbjct: 235 FGSPEWDDYSDTVKDLVSRFLVVQPQKRYTAEEALAHPFFQQ 276
>pdb|2QR7|A Chain A, 2.0a X-Ray Structure Of C-Terminal Kinase Domain Of P90
Ribosomal S6 Kinase 2: Se-Met Derivative
Length = 342
Score = 181 bits (458), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 99/263 (37%), Positives = 152/263 (57%), Gaps = 10/263 (3%)
Query: 379 YSVGQIIGDGNFAVVRQVYDKHKDMDCALKIIDKSKLLGKKQMIENEVNILRSVNHPNII 438
Y V + IG G+++V ++ K + + A+KIIDKSK + E E+ +LR HPNII
Sbjct: 24 YEVKEDIGVGSYSVCKRCIHKATNXEFAVKIIDKSK---RDPTEEIEI-LLRYGQHPNII 79
Query: 439 KLLDEYDTNNELYLVIELIKGGDLFDAISKNVKFSEEDSKFMTQSLASALSYLHDNYIVH 498
L D YD +Y+V EL KGG+L D I + FSE ++ + ++ + YLH +VH
Sbjct: 80 TLKDVYDDGKYVYVVTELXKGGELLDKILRQKFFSEREASAVLFTITKTVEYLHAQGVVH 139
Query: 499 RDIKPENLLVEMSGCHVKVLKVGDFGLAQRVLRP----MFTVCGTPTYVAPEILNESGYG 554
RD+KP N+L + + +++ DFG A++ LR + T C T +VAPE+L GY
Sbjct: 140 RDLKPSNILYVDESGNPESIRICDFGFAKQ-LRAENGLLXTPCYTANFVAPEVLERQGYD 198
Query: 555 VKIDVWAAGVILYILLCGFPPFVSDTNDQ-DELFDDILSGQYGFPSPYWDDISEEAKELI 613
D+W+ GV+LY L G+ PF + +D +E+ I SG++ YW+ +S+ AK+L+
Sbjct: 199 AACDIWSLGVLLYTXLTGYTPFANGPDDTPEEILARIGSGKFSLSGGYWNSVSDTAKDLV 258
Query: 614 SHMLESNPDLRFSAEDVLDHPWL 636
S L +P R +A VL HPW+
Sbjct: 259 SKXLHVDPHQRLTAALVLRHPWI 281
>pdb|2YA9|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
pdb|2YA9|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
pdb|2YAA|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Atp
pdb|2YAA|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Atp
pdb|2YAB|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Amp
pdb|2YAB|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Amp
Length = 361
Score = 180 bits (456), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 95/268 (35%), Positives = 152/268 (56%), Gaps = 15/268 (5%)
Query: 379 YSVGQIIGDGNFAVVRQVYDKHKDMDCALKIIDKSKLLGKK-----QMIENEVNILRSVN 433
Y +G+ +G G FA+V++ +K ++ A K I K + + + IE EV+ILR V
Sbjct: 14 YDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVCREEIEREVSILRQVL 73
Query: 434 HPNIIKLLDEYDTNNELYLVIELIKGGDLFDAISKNVKFSEEDSKFMTQSLASALSYLHD 493
HPNII L D Y+ ++ L++EL+ GG+LFD +++ SEE++ + + ++YLH
Sbjct: 74 HPNIITLHDVYENRTDVVLILELVSGGELFDFLAQKESLSEEEATSFIKQILDGVNYLHT 133
Query: 494 NYIVHRDIKPENLLVEMSGCHVKVLKVGDFGLAQRV-----LRPMFTVCGTPTYVAPEIL 548
I H D+KPEN+++ + +K+ DFGLA + + +F GTP +VAPEI+
Sbjct: 134 KKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEFKNIF---GTPEFVAPEIV 190
Query: 549 NESGYGVKIDVWAAGVILYILLCGFPPFVSDTNDQDELFDDILSGQYGFPSPYWDDISEE 608
N G++ D+W+ GVI YILL G PF+ DT + E +I + Y F ++ SE
Sbjct: 191 NYEPLGLEADMWSIGVITYILLSGASPFLGDT--KQETLANITAVSYDFDEEFFSQTSEL 248
Query: 609 AKELISHMLESNPDLRFSAEDVLDHPWL 636
AK+ I +L R + ++ L HPW+
Sbjct: 249 AKDFIRKLLVKETRKRLTIQEALRHPWI 276
>pdb|3Q5I|A Chain A, Crystal Structure Of Pbanka_031420
Length = 504
Score = 179 bits (454), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 105/281 (37%), Positives = 162/281 (57%), Gaps = 18/281 (6%)
Query: 372 PSKLLQRYSVGQIIGDGNFAVVRQVYDKHKDMDCALKIIDKSKLLGKK------------ 419
K+ + Y + +G G + V +K+ + A+K+I KS+ +
Sbjct: 31 EGKIGESYFKVRKLGSGAYGEVLLCKEKNGHSEKAIKVIKKSQFDKGRYSDDNKNIEKFH 90
Query: 420 QMIENEVNILRSVNHPNIIKLLDEYDTNNELYLVIELIKGGDLFDAISKNVKFSEEDSKF 479
+ I NE+++L+S++HPNIIKL D ++ YLV E +GG+LF+ I KF E D+
Sbjct: 91 EEIYNEISLLKSLDHPNIIKLFDVFEDKKYFYLVTEFYEGGELFEQIINRHKFDECDAAN 150
Query: 480 MTQSLASALSYLHDNYIVHRDIKPENLLVEMSGCHVKVLKVGDFGLAQRVLR--PMFTVC 537
+ + + S + YLH + IVHRDIKPEN+L+E + + K+ DFGL+ + +
Sbjct: 151 IMKQILSGICYLHKHNIVHRDIKPENILLENKNSLLNI-KIVDFGLSSFFSKDYKLRDRL 209
Query: 538 GTPTYVAPEILNESGYGVKIDVWAAGVILYILLCGFPPFVSDTNDQDELFDDILSGQYGF 597
GT Y+APE+L + Y K DVW+ GVI+YILLCG+PPF NDQD + + G+Y F
Sbjct: 210 GTAYYIAPEVLKKK-YNEKCDVWSCGVIMYILLCGYPPF-GGQNDQD-IIKKVEKGKYYF 266
Query: 598 PSPYWDDISEEAKELISHMLESNPDLRFSAEDVLDHPWLER 638
W +IS+EAKELI ML + + R +AE+ L+ W+++
Sbjct: 267 DFNDWKNISDEAKELIKLMLTYDYNKRCTAEEALNSRWIKK 307
>pdb|2J90|A Chain A, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
pdb|2J90|B Chain B, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
Length = 304
Score = 179 bits (453), Expect = 6e-45, Method: Compositional matrix adjust.
Identities = 96/278 (34%), Positives = 154/278 (55%), Gaps = 9/278 (3%)
Query: 367 ENLNIPSKLLQRYSVGQIIGDGNFAVVRQVYDKHKDMDCALKIIDKSKLLGKK-----QM 421
ENL S + Y +G+ +G G FA+VR+ K + A K I K +L + +
Sbjct: 16 ENLYFQSMVEDHYEMGEELGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLXSSRRGVSREE 75
Query: 422 IENEVNILRSVNHPNIIKLLDEYDTNNELYLVIELIKGGDLFDAISKNVKFSEEDSKFMT 481
IE EVNILR + HPNII L D ++ ++ L++EL+ GG+LFD +++ +E+++
Sbjct: 76 IEREVNILREIRHPNIITLHDIFENKTDVVLILELVSGGELFDFLAEKESLTEDEATQFL 135
Query: 482 QSLASALSYLHDNYIVHRDIKPENLLVEMSGCHVKVLKVGDFGLAQRVL--RPMFTVCGT 539
+ + + YLH I H D+KPEN+++ +K+ DFG+A ++ + GT
Sbjct: 136 KQILDGVHYLHSKRIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKIEAGNEFKNIFGT 195
Query: 540 PTYVAPEILNESGYGVKIDVWAAGVILYILLCGFPPFVSDTNDQDELFDDILSGQYGFPS 599
P +VAPEI+N G++ D+W+ GVI YILL G PF+ +T + E +I + Y F
Sbjct: 196 PEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGET--KQETLTNISAVNYDFDE 253
Query: 600 PYWDDISEEAKELISHMLESNPDLRFSAEDVLDHPWLE 637
Y+ + SE AK+ I +L +P R L+H W++
Sbjct: 254 EYFSNTSELAKDFIRRLLVKDPKRRMXIAQSLEHSWIK 291
>pdb|2XUU|A Chain A, Crystal Structure Of A Dap-Kinase 1 Mutant
Length = 334
Score = 178 bits (451), Expect = 9e-45, Method: Compositional matrix adjust.
Identities = 95/283 (33%), Positives = 159/283 (56%), Gaps = 15/283 (5%)
Query: 362 TIKRRENLNIPSKLLQRYSVGQIIGDGNFAVVRQVYDKHKDMDCALKIIDKSKLLGKKQM 421
T+ R+EN++ Y G+ +G G FAVV++ +K + A K I K + ++
Sbjct: 2 TVFRQENVD------DYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRG 55
Query: 422 -----IENEVNILRSVNHPNIIKLLDEYDTNNELYLVIELIKGGDLFDAISKNVKFSEED 476
IE EV+IL+ + HPN+I L + Y+ ++ L++EL+ GG+LFD +++ +EE+
Sbjct: 56 VSREDIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEE 115
Query: 477 SKFMTQSLASALSYLHDNYIVHRDIKPENLLVEMSGCHVKVLKVGDFGLAQRV--LRPMF 534
+ + + + + YLH I H D+KPEN+++ +K+ DFGLA ++
Sbjct: 116 ATEFLKQILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFK 175
Query: 535 TVCGTPTYVAPEILNESGYGVKIDVWAAGVILYILLCGFPPFVSDTNDQDELFDDILSGQ 594
+ GTP +VAPEI+N G++ D+W+ GVI YILL G PF+ DT + E ++ +
Sbjct: 176 NIFGTPAFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDT--KQETLANVSAVN 233
Query: 595 YGFPSPYWDDISEEAKELISHMLESNPDLRFSAEDVLDHPWLE 637
Y F Y+ + S AK+ I +L +P R + +D L HPW++
Sbjct: 234 YEFEDEYFSNTSALAKDFIRRLLVKDPKKRMTIQDSLQHPWIK 276
>pdb|2GNG|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase
pdb|2GNH|A Chain A, Pka Five Fold Mutant Model Of Rho-Kinase With H1152p
pdb|2GNI|A Chain A, Pka Fivefold Mutant Model Of Rho-Kinase With Inhibitor
Fasudil (Ha1077)
Length = 350
Score = 178 bits (451), Expect = 9e-45, Method: Compositional matrix adjust.
Identities = 101/303 (33%), Positives = 167/303 (55%), Gaps = 17/303 (5%)
Query: 341 ASGREVPKMPTKTSVARCATATIKRRENLNIPSKLLQRYSVGQIIGDGNFAVVRQVYDKH 400
A+ + + K +A+ +K+ EN + L ++ + IG G+F V V
Sbjct: 5 AAKKGXEQESVKEFLAKAKEDFLKKWENPAQNTAHLDQFERIKTIGTGSFGRVMLVKHME 64
Query: 401 KDMDCALKIIDKSKLLGKKQMIE--NEVNILRSVNHPNIIKLLDEYDTNNELYLVIELIK 458
A+KI+DK K++ KQ+ NE IL++VN P ++KL + N+ LY+V+E +
Sbjct: 65 TGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYMP 124
Query: 459 GGDLFDAISKNVKFSEEDSKFMTQSLASALSYLHDNYIVHRDIKPENLLVEMSGCHVKVL 518
GGD+F + + +FSE ++F + YLH +++RD+KPENLL++ G +
Sbjct: 125 GGDMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQG----YI 180
Query: 519 KVGDFGLAQRVLRPMFTVCGTPTYVAPEILNESGYGVKIDVWAAGVILYILLCGFPPFVS 578
KV DFG A+RV + +CGTP Y+APEI+ GY +D WA GV++Y + G+PPF +
Sbjct: 181 KVADFGFAKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFA 240
Query: 579 DTNDQDELFDDILSGQYGFPSPYWDDISEEAKELISHMLESNPDLRF-----SAEDVLDH 633
D Q +++ I+SG+ FPS + S + K+L+ ++L+ + RF D+ +H
Sbjct: 241 DQPIQ--IYEKIVSGKVRFPSHF----SSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNH 294
Query: 634 PWL 636
W
Sbjct: 295 KWF 297
>pdb|2QG5|A Chain A, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
pdb|2QG5|B Chain B, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
pdb|2QG5|D Chain D, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
Length = 294
Score = 178 bits (451), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 101/280 (36%), Positives = 161/280 (57%), Gaps = 13/280 (4%)
Query: 366 RENL----NIPSKLLQRYSVGQIIGDGNFAVVRQVYDKHKDMDCALKIIDKSKLLGKKQM 421
RENL + + Q Y++ IG G++ V+ K + A K I K +
Sbjct: 11 RENLYFQGSTKGDINQYYTLENTIGRGSWGEVKIAVQKGTRIRRAAKKIPKY-FVEDVDR 69
Query: 422 IENEVNILRSVNHPNIIKLLDEYDTNNELYLVIELIKGGDLFDAISKNVKFSEEDSKFMT 481
+ E+ I++S++HPNII+L + ++ N ++YLV+EL GG+LF+ + F E D+ +
Sbjct: 70 FKQEIEIMKSLDHPNIIRLYETFEDNTDIYLVMELCTGGELFERVVHKRVFRESDAARIM 129
Query: 482 QSLASALSYLHDNYIVHRDIKPENLLVEMSGCHVKVLKVGDFGLAQRVLRP---MFTVCG 538
+ + SA++Y H + HRD+KPEN L ++ LK+ DFGLA R +P M T G
Sbjct: 130 KDVLSAVAYCHKLNVAHRDLKPENFLF-LTDSPDSPLKLIDFGLAAR-FKPGKMMRTKVG 187
Query: 539 TPTYVAPEILNESGYGVKIDVWAAGVILYILLCGFPPFVSDTNDQDELFDDILSGQYGFP 598
TP YV+P++L E YG + D W+AGV++Y+LLCG+PPF + T+ E+ I G + FP
Sbjct: 188 TPYYVSPQVL-EGLYGPECDEWSAGVMMYVLLCGYPPFSAPTD--XEVMLKIREGTFTFP 244
Query: 599 SPYWDDISEEAKELISHMLESNPDLRFSAEDVLDHPWLER 638
W ++S +A+ LI +L +P R ++ L+H W E+
Sbjct: 245 EKDWLNVSPQAESLIRRLLTKSPKQRITSLQALEHEWFEK 284
>pdb|2GNF|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase With
Y- 27632
Length = 350
Score = 178 bits (451), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 100/293 (34%), Positives = 163/293 (55%), Gaps = 17/293 (5%)
Query: 351 TKTSVARCATATIKRRENLNIPSKLLQRYSVGQIIGDGNFAVVRQVYDKHKDMDCALKII 410
K +A+ +K+ EN + L ++ + IG G+F V V A+KI+
Sbjct: 15 VKEFLAKAKEDFLKKWENPAQNTAHLDQFERIKTIGTGSFGRVMLVKHMETGNHYAMKIL 74
Query: 411 DKSKLLGKKQMIE--NEVNILRSVNHPNIIKLLDEYDTNNELYLVIELIKGGDLFDAISK 468
DK K++ KQ+ NE IL++VN P ++KL + N+ LY+V+E + GGD+F + +
Sbjct: 75 DKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYMPGGDMFSHLRR 134
Query: 469 NVKFSEEDSKFMTQSLASALSYLHDNYIVHRDIKPENLLVEMSGCHVKVLKVGDFGLAQR 528
+FSE ++F + YLH +++RD+KPENLL++ G +KV DFG A+R
Sbjct: 135 IGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQG----YIKVADFGFAKR 190
Query: 529 VLRPMFTVCGTPTYVAPEILNESGYGVKIDVWAAGVILYILLCGFPPFVSDTNDQDELFD 588
V + +CGTP Y+APEI+ GY +D WA GV++Y + G+PPF +D Q +++
Sbjct: 191 VKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQ--IYE 248
Query: 589 DILSGQYGFPSPYWDDISEEAKELISHMLESNPDLRF-----SAEDVLDHPWL 636
I+SG+ FPS + S + K+L+ ++L+ + RF D+ +H W
Sbjct: 249 KIVSGKVRFPSHF----SSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWF 297
>pdb|4DFY|A Chain A, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
pdb|4DFY|E Chain E, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
Length = 371
Score = 177 bits (450), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 98/293 (33%), Positives = 165/293 (56%), Gaps = 17/293 (5%)
Query: 351 TKTSVARCATATIKRRENLNIPSKLLQRYSVGQIIGDGNFAVVRQVYDKHKDMDCALKII 410
K +A+ +K+ E + + L ++ + +G G+F V V K A+KI+
Sbjct: 36 VKEFLAKAKEDFLKKWETPSQNTAQLDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKIL 95
Query: 411 DKSKLLGKKQMIE--NEVNILRSVNHPNIIKLLDEYDTNNELYLVIELIKGGDLFDAISK 468
DK K++ KQ+ NE IL++VN P ++KL + N+ LY+V+E + GG++F + +
Sbjct: 96 DKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRR 155
Query: 469 NVKFSEEDSKFMTQSLASALSYLHDNYIVHRDIKPENLLVEMSGCHVKVLKVGDFGLAQR 528
+FSE ++F + YLH +++RD+KPENLL++ G ++V DFG A+R
Sbjct: 156 IGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQG----YIQVTDFGFAKR 211
Query: 529 VLRPMFTVCGTPTYVAPEILNESGYGVKIDVWAAGVILYILLCGFPPFVSDTNDQDELFD 588
V +T+CGTP Y+APEI+ GY +D WA GV++Y + G+PPF +D Q +++
Sbjct: 212 VKGATWTLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQ--IYE 269
Query: 589 DILSGQYGFPSPYWDDISEEAKELISHMLESNPDLRF-----SAEDVLDHPWL 636
I+SG+ FPS + D+ K+L+ ++L+ + RF D+ +H W
Sbjct: 270 KIVSGKVRFPSHFSSDL----KDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWF 318
>pdb|3F3Z|A Chain A, Crystal Structure Of Cryptosporidium Parvum Calcium
Dependent Protein Kinase Cgd7_1840 In Presence Of
Indirubin E804
Length = 277
Score = 177 bits (450), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 97/266 (36%), Positives = 155/266 (58%), Gaps = 9/266 (3%)
Query: 377 QRYSVGQIIGDGNFAVVRQVYDKHKDMDCALKIIDKSKLLGKKQMIENEVNILRSVNHPN 436
Q Y++ IG G++ V+ K + A K I K + + E+ I++S++HPN
Sbjct: 9 QYYTLENTIGRGSWGEVKIAVQKGTRIRRAAKKIPKY-FVEDVDRFKQEIEIMKSLDHPN 67
Query: 437 IIKLLDEYDTNNELYLVIELIKGGDLFDAISKNVKFSEEDSKFMTQSLASALSYLHDNYI 496
II+L + ++ N ++YLV+EL GG+LF+ + F E D+ + + + SA++Y H +
Sbjct: 68 IIRLYETFEDNTDIYLVMELCTGGELFERVVHKRVFRESDAARIMKDVLSAVAYCHKLNV 127
Query: 497 VHRDIKPENLLVEMSGCHVKVLKVGDFGLAQRVLRP---MFTVCGTPTYVAPEILNESGY 553
HRD+KPEN L ++ LK+ DFGLA R +P M T GTP YV+P++L E Y
Sbjct: 128 AHRDLKPENFLF-LTDSPDSPLKLIDFGLAAR-FKPGKMMRTKVGTPYYVSPQVL-EGLY 184
Query: 554 GVKIDVWAAGVILYILLCGFPPFVSDTNDQDELFDDILSGQYGFPSPYWDDISEEAKELI 613
G + D W+AGV++Y+LLCG+PPF + T+ E+ I G + FP W ++S +A+ LI
Sbjct: 185 GPECDEWSAGVMMYVLLCGYPPFSAPTD--XEVMLKIREGTFTFPEKDWLNVSPQAESLI 242
Query: 614 SHMLESNPDLRFSAEDVLDHPWLERS 639
+L +P R ++ L+H W E+
Sbjct: 243 RRLLTKSPKQRITSLQALEHEWFEKQ 268
>pdb|2X0G|A Chain A, X-ray Structure Of A Dap-kinase Calmodulin Complex
Length = 334
Score = 177 bits (450), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 95/283 (33%), Positives = 159/283 (56%), Gaps = 15/283 (5%)
Query: 362 TIKRRENLNIPSKLLQRYSVGQIIGDGNFAVVRQVYDKHKDMDCALKIIDKSKLLGKKQM 421
T+ R+EN++ Y G+ +G G FAVV++ +K + A K I K + ++
Sbjct: 2 TVFRQENVD------DYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRG 55
Query: 422 -----IENEVNILRSVNHPNIIKLLDEYDTNNELYLVIELIKGGDLFDAISKNVKFSEED 476
IE EV+IL+ + HPN+I L + Y+ ++ L++EL+ GG+LFD +++ +EE+
Sbjct: 56 VSREDIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEE 115
Query: 477 SKFMTQSLASALSYLHDNYIVHRDIKPENLLVEMSGCHVKVLKVGDFGLAQRV--LRPMF 534
+ + + + + YLH I H D+KPEN+++ +K+ DFGLA ++
Sbjct: 116 ATEFLKQILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFK 175
Query: 535 TVCGTPTYVAPEILNESGYGVKIDVWAAGVILYILLCGFPPFVSDTNDQDELFDDILSGQ 594
+ GTP +VAPEI+N G++ D+W+ GVI YILL G PF+ DT + E ++ +
Sbjct: 176 NIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDT--KQETLANVSAVN 233
Query: 595 YGFPSPYWDDISEEAKELISHMLESNPDLRFSAEDVLDHPWLE 637
Y F Y+ + S AK+ I +L +P R + +D L HPW++
Sbjct: 234 YEFEDEYFSNTSALAKDFIRRLLVKDPKKRMTIQDSLQHPWIK 276
>pdb|2W4K|A Chain A, X-Ray Structure Of A Dap-Kinase 2-302
Length = 302
Score = 177 bits (450), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 95/283 (33%), Positives = 159/283 (56%), Gaps = 15/283 (5%)
Query: 362 TIKRRENLNIPSKLLQRYSVGQIIGDGNFAVVRQVYDKHKDMDCALKIIDKSKLLGKKQM 421
T+ R+EN++ Y G+ +G G FAVV++ +K + A K I K + ++
Sbjct: 2 TVFRQENVD------DYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRG 55
Query: 422 -----IENEVNILRSVNHPNIIKLLDEYDTNNELYLVIELIKGGDLFDAISKNVKFSEED 476
IE EV+IL+ + HPN+I L + Y+ ++ L++EL+ GG+LFD +++ +EE+
Sbjct: 56 VSREDIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEE 115
Query: 477 SKFMTQSLASALSYLHDNYIVHRDIKPENLLVEMSGCHVKVLKVGDFGLAQRV--LRPMF 534
+ + + + + YLH I H D+KPEN+++ +K+ DFGLA ++
Sbjct: 116 ATEFLKQILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFK 175
Query: 535 TVCGTPTYVAPEILNESGYGVKIDVWAAGVILYILLCGFPPFVSDTNDQDELFDDILSGQ 594
+ GTP +VAPEI+N G++ D+W+ GVI YILL G PF+ DT + E ++ +
Sbjct: 176 NIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDT--KQETLANVSAVN 233
Query: 595 YGFPSPYWDDISEEAKELISHMLESNPDLRFSAEDVLDHPWLE 637
Y F Y+ + S AK+ I +L +P R + +D L HPW++
Sbjct: 234 YEFEDEYFSNTSALAKDFIRRLLVKDPKKRMTIQDSLQHPWIK 276
>pdb|2XZS|A Chain A, Death Associated Protein Kinase 1 Residues 1-312
pdb|2XZS|B Chain B, Death Associated Protein Kinase 1 Residues 1-312
Length = 312
Score = 177 bits (449), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 95/284 (33%), Positives = 159/284 (55%), Gaps = 15/284 (5%)
Query: 361 ATIKRRENLNIPSKLLQRYSVGQIIGDGNFAVVRQVYDKHKDMDCALKIIDKSKLLGKKQ 420
T+ R+EN++ Y G+ +G G FAVV++ +K + A K I K + ++
Sbjct: 1 GTVFRQENVD------DYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRR 54
Query: 421 M-----IENEVNILRSVNHPNIIKLLDEYDTNNELYLVIELIKGGDLFDAISKNVKFSEE 475
IE EV+IL+ + HPN+I L + Y+ ++ L++EL+ GG+LFD +++ +EE
Sbjct: 55 GVSREDIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEE 114
Query: 476 DSKFMTQSLASALSYLHDNYIVHRDIKPENLLVEMSGCHVKVLKVGDFGLAQRV--LRPM 533
++ + + + + YLH I H D+KPEN+++ +K+ DFGLA ++
Sbjct: 115 EATEFLKQILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEF 174
Query: 534 FTVCGTPTYVAPEILNESGYGVKIDVWAAGVILYILLCGFPPFVSDTNDQDELFDDILSG 593
+ GTP +VAPEI+N G++ D+W+ GVI YILL G PF+ DT + E ++ +
Sbjct: 175 KNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDT--KQETLANVSAV 232
Query: 594 QYGFPSPYWDDISEEAKELISHMLESNPDLRFSAEDVLDHPWLE 637
Y F Y+ + S AK+ I +L +P R + +D L HPW++
Sbjct: 233 NYEFEDEYFSNTSALAKDFIRRLLVKDPKKRMTIQDSLQHPWIK 276
>pdb|2GNJ|A Chain A, Pka Three Fold Mutant Model Of Rho-Kinase With Y-27632
pdb|2GNL|A Chain A, Pka Threefold Mutant Model Of Rho-Kinase With Inhibitor H-
1152p
Length = 350
Score = 177 bits (448), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 99/293 (33%), Positives = 163/293 (55%), Gaps = 17/293 (5%)
Query: 351 TKTSVARCATATIKRRENLNIPSKLLQRYSVGQIIGDGNFAVVRQVYDKHKDMDCALKII 410
K +A+ +K+ EN + L ++ + IG G+F V V A+KI+
Sbjct: 15 VKEFLAKAKEDFLKKWENPAQNTAHLDQFERIKTIGTGSFGRVMLVKHMETGNHYAMKIL 74
Query: 411 DKSKLLGKKQMIE--NEVNILRSVNHPNIIKLLDEYDTNNELYLVIELIKGGDLFDAISK 468
DK K++ KQ+ NE IL++VN P ++KL + N+ LY+V+E + GG++F + +
Sbjct: 75 DKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRR 134
Query: 469 NVKFSEEDSKFMTQSLASALSYLHDNYIVHRDIKPENLLVEMSGCHVKVLKVGDFGLAQR 528
+FSE ++F + YLH +++RD+KPENLL++ G +KV DFG A+R
Sbjct: 135 IGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQG----YIKVADFGFAKR 190
Query: 529 VLRPMFTVCGTPTYVAPEILNESGYGVKIDVWAAGVILYILLCGFPPFVSDTNDQDELFD 588
V + +CGTP Y+APEI+ GY +D WA GV++Y + G+PPF +D Q +++
Sbjct: 191 VKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQ--IYE 248
Query: 589 DILSGQYGFPSPYWDDISEEAKELISHMLESNPDLRF-----SAEDVLDHPWL 636
I+SG+ FPS + D+ K+L+ ++L+ + RF D+ +H W
Sbjct: 249 KIVSGKVRFPSHFSSDL----KDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWF 297
>pdb|2YAK|A Chain A, Structure Of Death-Associated Protein Kinase 1 (Dapk1) In
Complex With A Ruthenium Octasporine Ligand (Osv)
pdb|2Y4P|A Chain A, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|B Chain B, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|C Chain C, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|D Chain D, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|3ZXT|A Chain A, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|B Chain B, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|C Chain C, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|D Chain D, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
Length = 285
Score = 177 bits (448), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 95/283 (33%), Positives = 159/283 (56%), Gaps = 15/283 (5%)
Query: 362 TIKRRENLNIPSKLLQRYSVGQIIGDGNFAVVRQVYDKHKDMDCALKIIDKSKLLGKKQM 421
T+ R+EN++ Y G+ +G G FAVV++ +K + A K I K + ++
Sbjct: 2 TVFRQENVD------DYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRG 55
Query: 422 -----IENEVNILRSVNHPNIIKLLDEYDTNNELYLVIELIKGGDLFDAISKNVKFSEED 476
IE EV+IL+ + HPN+I L + Y+ ++ L++EL+ GG+LFD +++ +EE+
Sbjct: 56 VSREDIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEE 115
Query: 477 SKFMTQSLASALSYLHDNYIVHRDIKPENLLVEMSGCHVKVLKVGDFGLAQRV--LRPMF 534
+ + + + + YLH I H D+KPEN+++ +K+ DFGLA ++
Sbjct: 116 ATEFLKQILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFK 175
Query: 535 TVCGTPTYVAPEILNESGYGVKIDVWAAGVILYILLCGFPPFVSDTNDQDELFDDILSGQ 594
+ GTP +VAPEI+N G++ D+W+ GVI YILL G PF+ DT + E ++ +
Sbjct: 176 NIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDT--KQETLANVSAVN 233
Query: 595 YGFPSPYWDDISEEAKELISHMLESNPDLRFSAEDVLDHPWLE 637
Y F Y+ + S AK+ I +L +P R + +D L HPW++
Sbjct: 234 YEFEDEYFSNTSALAKDFIRRLLVKDPKKRMTIQDSLQHPWIK 276
>pdb|2Y0A|A Chain A, Structure Of Dapk1 Construct Residues 1-304
Length = 326
Score = 176 bits (447), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 95/284 (33%), Positives = 159/284 (55%), Gaps = 15/284 (5%)
Query: 361 ATIKRRENLNIPSKLLQRYSVGQIIGDGNFAVVRQVYDKHKDMDCALKIIDKSKLLGKKQ 420
T+ R+EN++ Y G+ +G G FAVV++ +K + A K I K + ++
Sbjct: 1 GTVFRQENVD------DYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRR 54
Query: 421 M-----IENEVNILRSVNHPNIIKLLDEYDTNNELYLVIELIKGGDLFDAISKNVKFSEE 475
IE EV+IL+ + HPN+I L + Y+ ++ L++EL+ GG+LFD +++ +EE
Sbjct: 55 GVSREDIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEE 114
Query: 476 DSKFMTQSLASALSYLHDNYIVHRDIKPENLLVEMSGCHVKVLKVGDFGLAQRV--LRPM 533
++ + + + + YLH I H D+KPEN+++ +K+ DFGLA ++
Sbjct: 115 EATEFLKQILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEF 174
Query: 534 FTVCGTPTYVAPEILNESGYGVKIDVWAAGVILYILLCGFPPFVSDTNDQDELFDDILSG 593
+ GTP +VAPEI+N G++ D+W+ GVI YILL G PF+ DT + E ++ +
Sbjct: 175 KNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDT--KQETLANVSAV 232
Query: 594 QYGFPSPYWDDISEEAKELISHMLESNPDLRFSAEDVLDHPWLE 637
Y F Y+ + S AK+ I +L +P R + +D L HPW++
Sbjct: 233 NYEFEDEYFSNTSALAKDFIRRLLVKDPKKRMTIQDSLQHPWIK 276
>pdb|2W4J|A Chain A, X-Ray Structure Of A Dap-Kinase 2-277
Length = 277
Score = 176 bits (447), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 95/283 (33%), Positives = 159/283 (56%), Gaps = 15/283 (5%)
Query: 362 TIKRRENLNIPSKLLQRYSVGQIIGDGNFAVVRQVYDKHKDMDCALKIIDKSKLLGKKQM 421
T+ R+EN++ Y G+ +G G FAVV++ +K + A K I K + ++
Sbjct: 2 TVFRQENVD------DYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRG 55
Query: 422 -----IENEVNILRSVNHPNIIKLLDEYDTNNELYLVIELIKGGDLFDAISKNVKFSEED 476
IE EV+IL+ + HPN+I L + Y+ ++ L++EL+ GG+LFD +++ +EE+
Sbjct: 56 VSREDIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEE 115
Query: 477 SKFMTQSLASALSYLHDNYIVHRDIKPENLLVEMSGCHVKVLKVGDFGLAQRV--LRPMF 534
+ + + + + YLH I H D+KPEN+++ +K+ DFGLA ++
Sbjct: 116 ATEFLKQILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFK 175
Query: 535 TVCGTPTYVAPEILNESGYGVKIDVWAAGVILYILLCGFPPFVSDTNDQDELFDDILSGQ 594
+ GTP +VAPEI+N G++ D+W+ GVI YILL G PF+ DT + E ++ +
Sbjct: 176 NIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDT--KQETLANVSAVN 233
Query: 595 YGFPSPYWDDISEEAKELISHMLESNPDLRFSAEDVLDHPWLE 637
Y F Y+ + S AK+ I +L +P R + +D L HPW++
Sbjct: 234 YEFEDEYFSNTSALAKDFIRRLLVKDPKKRMTIQDSLQHPWIK 276
>pdb|1IG1|A Chain A, 1.8a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mn.
pdb|1JKL|A Chain A, 1.6a X-Ray Structure Of Binary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue
pdb|1JKS|A Chain A, 1.5a X-Ray Structure Of Apo Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKT|A Chain A, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKT|B Chain B, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKK|A Chain A, 2.4a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mg.
pdb|3F5G|A Chain A, Crystal Structure Of Death Associated Protein Kinase In
Complex With Adp And Mg2+
pdb|3EH9|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Adp
pdb|3EHA|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Amppnp
Length = 294
Score = 176 bits (447), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 95/283 (33%), Positives = 159/283 (56%), Gaps = 15/283 (5%)
Query: 362 TIKRRENLNIPSKLLQRYSVGQIIGDGNFAVVRQVYDKHKDMDCALKIIDKSKLLGKKQM 421
T+ R+EN++ Y G+ +G G FAVV++ +K + A K I K + ++
Sbjct: 1 TVFRQENVD------DYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRG 54
Query: 422 -----IENEVNILRSVNHPNIIKLLDEYDTNNELYLVIELIKGGDLFDAISKNVKFSEED 476
IE EV+IL+ + HPN+I L + Y+ ++ L++EL+ GG+LFD +++ +EE+
Sbjct: 55 VSREDIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEE 114
Query: 477 SKFMTQSLASALSYLHDNYIVHRDIKPENLLVEMSGCHVKVLKVGDFGLAQRV--LRPMF 534
+ + + + + YLH I H D+KPEN+++ +K+ DFGLA ++
Sbjct: 115 ATEFLKQILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFK 174
Query: 535 TVCGTPTYVAPEILNESGYGVKIDVWAAGVILYILLCGFPPFVSDTNDQDELFDDILSGQ 594
+ GTP +VAPEI+N G++ D+W+ GVI YILL G PF+ DT + E ++ +
Sbjct: 175 NIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDT--KQETLANVSAVN 232
Query: 595 YGFPSPYWDDISEEAKELISHMLESNPDLRFSAEDVLDHPWLE 637
Y F Y+ + S AK+ I +L +P R + +D L HPW++
Sbjct: 233 YEFEDEYFSNTSALAKDFIRRLLVKDPKKRMTIQDSLQHPWIK 275
>pdb|1WVW|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
pdb|1WVX|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
pdb|1WVY|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
Length = 278
Score = 176 bits (447), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 95/283 (33%), Positives = 159/283 (56%), Gaps = 15/283 (5%)
Query: 362 TIKRRENLNIPSKLLQRYSVGQIIGDGNFAVVRQVYDKHKDMDCALKIIDKSKLLGKKQM 421
T+ R+EN++ Y G+ +G G FAVV++ +K + A K I K + ++
Sbjct: 2 TVFRQENVD------DYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRG 55
Query: 422 -----IENEVNILRSVNHPNIIKLLDEYDTNNELYLVIELIKGGDLFDAISKNVKFSEED 476
IE EV+IL+ + HPN+I L + Y+ ++ L++EL+ GG+LFD +++ +EE+
Sbjct: 56 VSREDIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEE 115
Query: 477 SKFMTQSLASALSYLHDNYIVHRDIKPENLLVEMSGCHVKVLKVGDFGLAQRV--LRPMF 534
+ + + + + YLH I H D+KPEN+++ +K+ DFGLA ++
Sbjct: 116 ATEFLKQILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFK 175
Query: 535 TVCGTPTYVAPEILNESGYGVKIDVWAAGVILYILLCGFPPFVSDTNDQDELFDDILSGQ 594
+ GTP +VAPEI+N G++ D+W+ GVI YILL G PF+ DT + E ++ +
Sbjct: 176 NIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDT--KQETLANVSAVN 233
Query: 595 YGFPSPYWDDISEEAKELISHMLESNPDLRFSAEDVLDHPWLE 637
Y F Y+ + S AK+ I +L +P R + +D L HPW++
Sbjct: 234 YEFEDEYFSNTSALAKDFIRRLLVKDPKKRMTIQDSLQHPWIK 276
>pdb|1CDK|A Chain A, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
pdb|1CDK|B Chain B, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
Length = 350
Score = 176 bits (447), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 98/293 (33%), Positives = 164/293 (55%), Gaps = 17/293 (5%)
Query: 351 TKTSVARCATATIKRRENLNIPSKLLQRYSVGQIIGDGNFAVVRQVYDKHKDMDCALKII 410
K +A+ +K+ EN + L ++ + +G G+F V V K A+KI+
Sbjct: 15 VKEFLAKAKEDFLKKWENPAQNTAHLDQFERIKTLGTGSFGRVMLVKHKETGNHFAMKIL 74
Query: 411 DKSKLLGKKQMIE--NEVNILRSVNHPNIIKLLDEYDTNNELYLVIELIKGGDLFDAISK 468
DK K++ KQ+ NE IL++VN P ++KL + N+ LY+V+E + GG++F + +
Sbjct: 75 DKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEYSFKDNSNLYMVMEYVPGGEMFSHLRR 134
Query: 469 NVKFSEEDSKFMTQSLASALSYLHDNYIVHRDIKPENLLVEMSGCHVKVLKVGDFGLAQR 528
+FSE ++F + YLH +++RD+KPENLL++ G ++V DFG A+R
Sbjct: 135 IGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQG----YIQVTDFGFAKR 190
Query: 529 VLRPMFTVCGTPTYVAPEILNESGYGVKIDVWAAGVILYILLCGFPPFVSDTNDQDELFD 588
V + +CGTP Y+APEI+ GY +D WA GV++Y + G+PPF +D Q +++
Sbjct: 191 VKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQ--IYE 248
Query: 589 DILSGQYGFPSPYWDDISEEAKELISHMLESNPDLRF-----SAEDVLDHPWL 636
I+SG+ FPS + D+ K+L+ ++L+ + RF D+ +H W
Sbjct: 249 KIVSGKVRFPSHFSSDL----KDLLRNLLQVDLTKRFGNLKDGVNDIKNHKWF 297
>pdb|1CMK|E Chain E, Crystal Structures Of The Myristylated Catalytic Subunit
Of Camp- Dependent Protein Kinase Reveal Open And Closed
Conformations
Length = 350
Score = 176 bits (447), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 98/293 (33%), Positives = 164/293 (55%), Gaps = 17/293 (5%)
Query: 351 TKTSVARCATATIKRRENLNIPSKLLQRYSVGQIIGDGNFAVVRQVYDKHKDMDCALKII 410
K +A+ +K+ EN + L ++ + +G G+F V V K A+KI+
Sbjct: 15 VKEFLAKAKEDFLKKWENPAQNTAHLDQFERIKTLGTGSFGRVMLVKHKETGNHFAMKIL 74
Query: 411 DKSKLLGKKQMIE--NEVNILRSVNHPNIIKLLDEYDTNNELYLVIELIKGGDLFDAISK 468
DK K++ KQ+ NE IL++VN P ++KL + N+ LY+V+E + GG++F + +
Sbjct: 75 DKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEYSFKDNSNLYMVMEYVPGGEMFSHLRR 134
Query: 469 NVKFSEEDSKFMTQSLASALSYLHDNYIVHRDIKPENLLVEMSGCHVKVLKVGDFGLAQR 528
+FSE ++F + YLH +++RD+KPENLL++ G ++V DFG A+R
Sbjct: 135 IGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQG----YIQVTDFGFAKR 190
Query: 529 VLRPMFTVCGTPTYVAPEILNESGYGVKIDVWAAGVILYILLCGFPPFVSDTNDQDELFD 588
V + +CGTP Y+APEI+ GY +D WA GV++Y + G+PPF +D Q +++
Sbjct: 191 VKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQ--IYE 248
Query: 589 DILSGQYGFPSPYWDDISEEAKELISHMLESNPDLRF-----SAEDVLDHPWL 636
I+SG+ FPS + D+ K+L+ ++L+ + RF D+ +H W
Sbjct: 249 KIVSGKVRFPSHFSSDL----KDLLRNLLQVDLTKRFGNLKDGVNDIKNHKWF 297
>pdb|3F5U|A Chain A, Crystal Structure Of The Death Associated Protein Kinase
In Complex With Amppnp And Mg2+
Length = 295
Score = 176 bits (447), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 95/283 (33%), Positives = 159/283 (56%), Gaps = 15/283 (5%)
Query: 362 TIKRRENLNIPSKLLQRYSVGQIIGDGNFAVVRQVYDKHKDMDCALKIIDKSKLLGKKQM 421
T+ R+EN++ Y G+ +G G FAVV++ +K + A K I K + ++
Sbjct: 2 TVFRQENVD------DYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRG 55
Query: 422 -----IENEVNILRSVNHPNIIKLLDEYDTNNELYLVIELIKGGDLFDAISKNVKFSEED 476
IE EV+IL+ + HPN+I L + Y+ ++ L++EL+ GG+LFD +++ +EE+
Sbjct: 56 VSREDIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEE 115
Query: 477 SKFMTQSLASALSYLHDNYIVHRDIKPENLLVEMSGCHVKVLKVGDFGLAQRV--LRPMF 534
+ + + + + YLH I H D+KPEN+++ +K+ DFGLA ++
Sbjct: 116 ATEFLKQILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFK 175
Query: 535 TVCGTPTYVAPEILNESGYGVKIDVWAAGVILYILLCGFPPFVSDTNDQDELFDDILSGQ 594
+ GTP +VAPEI+N G++ D+W+ GVI YILL G PF+ DT + E ++ +
Sbjct: 176 NIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDT--KQETLANVSAVN 233
Query: 595 YGFPSPYWDDISEEAKELISHMLESNPDLRFSAEDVLDHPWLE 637
Y F Y+ + S AK+ I +L +P R + +D L HPW++
Sbjct: 234 YEFEDEYFSNTSALAKDFIRRLLVKDPKKRMTIQDSLQHPWIK 276
>pdb|1CTP|E Chain E, Structure Of The Mammalian Catalytic Subunit Of
Camp-Dependent Protein Kinase And An Inhibitor Peptide
Displays An Open Conformation
Length = 350
Score = 176 bits (447), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 98/293 (33%), Positives = 164/293 (55%), Gaps = 17/293 (5%)
Query: 351 TKTSVARCATATIKRRENLNIPSKLLQRYSVGQIIGDGNFAVVRQVYDKHKDMDCALKII 410
K +A+ +K+ EN + L ++ + +G G+F V V K A+KI+
Sbjct: 15 VKEFLAKAKEDFLKKWENPAQNTAHLDQFERIKTLGTGSFGRVMLVKHKETGNHFAMKIL 74
Query: 411 DKSKLLGKKQMIE--NEVNILRSVNHPNIIKLLDEYDTNNELYLVIELIKGGDLFDAISK 468
DK K++ KQ+ NE IL++VN P ++KL + N+ LY+V+E + GG++F + +
Sbjct: 75 DKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEYSFKDNSNLYMVMEYVPGGEMFSHLRR 134
Query: 469 NVKFSEEDSKFMTQSLASALSYLHDNYIVHRDIKPENLLVEMSGCHVKVLKVGDFGLAQR 528
+FSE ++F + YLH +++RD+KPENLL++ G ++V DFG A+R
Sbjct: 135 IGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQG----YIQVTDFGFAKR 190
Query: 529 VLRPMFTVCGTPTYVAPEILNESGYGVKIDVWAAGVILYILLCGFPPFVSDTNDQDELFD 588
V + +CGTP Y+APEI+ GY +D WA GV++Y + G+PPF +D Q +++
Sbjct: 191 VKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQ--IYE 248
Query: 589 DILSGQYGFPSPYWDDISEEAKELISHMLESNPDLRF-----SAEDVLDHPWL 636
I+SG+ FPS + D+ K+L+ ++L+ + RF D+ +H W
Sbjct: 249 KIVSGKVRFPSHFSSDL----KDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWF 297
>pdb|3DFC|B Chain B, Crystal Structure Of A Glycine-Rich Loop Mutant Of The
Death Associated Protein Kinase Catalytic Domain With
Amppnp
pdb|3DGK|A Chain A, Crystal Structure Of A Glycine-Rich Loop Mutant Of The
Death Associated Protein Kinase Catalytic Domain
Length = 295
Score = 176 bits (447), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 95/283 (33%), Positives = 159/283 (56%), Gaps = 15/283 (5%)
Query: 362 TIKRRENLNIPSKLLQRYSVGQIIGDGNFAVVRQVYDKHKDMDCALKIIDKSKLLGKKQM 421
T+ R+EN++ Y G+ +G G FAVV++ +K + A K I K + ++
Sbjct: 2 TVFRQENVD------DYYDTGEELGSGKFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRG 55
Query: 422 -----IENEVNILRSVNHPNIIKLLDEYDTNNELYLVIELIKGGDLFDAISKNVKFSEED 476
IE EV+IL+ + HPN+I L + Y+ ++ L++EL+ GG+LFD +++ +EE+
Sbjct: 56 VSREDIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEE 115
Query: 477 SKFMTQSLASALSYLHDNYIVHRDIKPENLLVEMSGCHVKVLKVGDFGLAQRV--LRPMF 534
+ + + + + YLH I H D+KPEN+++ +K+ DFGLA ++
Sbjct: 116 ATEFLKQILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFK 175
Query: 535 TVCGTPTYVAPEILNESGYGVKIDVWAAGVILYILLCGFPPFVSDTNDQDELFDDILSGQ 594
+ GTP +VAPEI+N G++ D+W+ GVI YILL G PF+ DT + E ++ +
Sbjct: 176 NIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDT--KQETLANVSAVN 233
Query: 595 YGFPSPYWDDISEEAKELISHMLESNPDLRFSAEDVLDHPWLE 637
Y F Y+ + S AK+ I +L +P R + +D L HPW++
Sbjct: 234 YEFEDEYFSNTSALAKDFIRRLLVKDPKKRMTIQDSLQHPWIK 276
>pdb|1P4F|A Chain A, Death Associated Protein Kinase Catalytic Domain With
Bound Inhibitor Fragment
Length = 293
Score = 176 bits (446), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 95/283 (33%), Positives = 159/283 (56%), Gaps = 15/283 (5%)
Query: 362 TIKRRENLNIPSKLLQRYSVGQIIGDGNFAVVRQVYDKHKDMDCALKIIDKSKLLGKKQM 421
T+ R+EN++ Y G+ +G G FAVV++ +K + A K I K + ++
Sbjct: 1 TVFRQENVD------DYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRG 54
Query: 422 -----IENEVNILRSVNHPNIIKLLDEYDTNNELYLVIELIKGGDLFDAISKNVKFSEED 476
IE EV+IL+ + HPN+I L + Y+ ++ L++EL+ GG+LFD +++ +EE+
Sbjct: 55 VSREDIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEE 114
Query: 477 SKFMTQSLASALSYLHDNYIVHRDIKPENLLVEMSGCHVKVLKVGDFGLAQRV--LRPMF 534
+ + + + + YLH I H D+KPEN+++ +K+ DFGLA ++
Sbjct: 115 ATEFLKQILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFK 174
Query: 535 TVCGTPTYVAPEILNESGYGVKIDVWAAGVILYILLCGFPPFVSDTNDQDELFDDILSGQ 594
+ GTP +VAPEI+N G++ D+W+ GVI YILL G PF+ DT + E ++ +
Sbjct: 175 NIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDT--KQETLANVSAVN 232
Query: 595 YGFPSPYWDDISEEAKELISHMLESNPDLRFSAEDVLDHPWLE 637
Y F Y+ + S AK+ I +L +P R + +D L HPW++
Sbjct: 233 YEFEDEYFSNTSALAKDFIRRLLVKDPKKRMTIQDSLQHPWIK 275
>pdb|3COK|A Chain A, Crystal Structure Of Plk4 Kinase
pdb|3COK|B Chain B, Crystal Structure Of Plk4 Kinase
Length = 278
Score = 176 bits (446), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 95/270 (35%), Positives = 157/270 (58%), Gaps = 16/270 (5%)
Query: 376 LQRYSVGQIIGDGNFAVVRQVYDKHKDMDCALKIIDKSKLL--GKKQMIENEVNILRSVN 433
++ + VG ++G G+FA V + H ++ A+K+IDK + G Q ++NEV I +
Sbjct: 10 IEDFKVGNLLGKGSFAGVYRAESIHTGLEVAIKMIDKKAMYKAGMVQRVQNEVKIHCQLK 69
Query: 434 HPNIIKLLDEYDTNNELYLVIELIKGGDLFDAISKNVK-FSEEDSKFMTQSLASALSYLH 492
HP+I++L + ++ +N +YLV+E+ G++ + VK FSE +++ + + + YLH
Sbjct: 70 HPSILELYNYFEDSNYVYLVLEMCHNGEMNRYLKNRVKPFSENEARHFMHQIITGMLYLH 129
Query: 493 DNYIVHRDIKPENLLVEMSGCHVKVLKVGDFGLAQRVLRPM---FTVCGTPTYVAPEILN 549
+ I+HRD+ NLL+ + +K+ DFGLA ++ P +T+CGTP Y++PEI
Sbjct: 130 SHGILHRDLTLSNLLLTRN----MNIKIADFGLATQLKMPHEKHYTLCGTPNYISPEIAT 185
Query: 550 ESGYGVKIDVWAAGVILYILLCGFPPFVSDTNDQDELFDDILSGQYGFPSPYWDDISEEA 609
S +G++ DVW+ G + Y LL G PPF DT+ + ++ Y PS +S EA
Sbjct: 186 RSAHGLESDVWSLGCMFYTLLIGRPPF--DTDTVKNTLNKVVLADYEMPS----FLSIEA 239
Query: 610 KELISHMLESNPDLRFSAEDVLDHPWLERS 639
K+LI +L NP R S VLDHP++ R+
Sbjct: 240 KDLIHQLLRRNPADRLSLSSVLDHPFMSRN 269
>pdb|2UZT|A Chain A, Pka Structures Of Akt, Indazole-Pyridine Inhibitors
pdb|2UZU|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
pdb|2UZV|A Chain A, Pka Structures Of Indazole-pyridine Series Of Akt
Inhibitors
pdb|2UZW|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
Length = 336
Score = 176 bits (445), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 98/293 (33%), Positives = 164/293 (55%), Gaps = 17/293 (5%)
Query: 351 TKTSVARCATATIKRRENLNIPSKLLQRYSVGQIIGDGNFAVVRQVYDKHKDMDCALKII 410
K +A+ +K+ EN + L ++ + +G G+F V V A+KI+
Sbjct: 1 VKEFLAKAKEDFLKKWENPAQNTAHLDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKIL 60
Query: 411 DKSKLLGKKQMIE--NEVNILRSVNHPNIIKLLDEYDTNNELYLVIELIKGGDLFDAISK 468
DK K++ KQ+ NE IL++VN P ++KL + N+ LY+V+E + GG++F + +
Sbjct: 61 DKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRR 120
Query: 469 NVKFSEEDSKFMTQSLASALSYLHDNYIVHRDIKPENLLVEMSGCHVKVLKVGDFGLAQR 528
+FSE ++F + YLH +++RD+KPENLL++ G ++V DFG A+R
Sbjct: 121 IGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQG----YIQVTDFGFAKR 176
Query: 529 VLRPMFTVCGTPTYVAPEILNESGYGVKIDVWAAGVILYILLCGFPPFVSDTNDQDELFD 588
V +T+CGTP Y+APEI+ GY +D WA GV++Y + G+PPF +D Q +++
Sbjct: 177 VKGRTWTLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQ--IYE 234
Query: 589 DILSGQYGFPSPYWDDISEEAKELISHMLESNPDLRF-----SAEDVLDHPWL 636
I+SG+ FPS + S + K+L+ ++L+ + RF D+ +H W
Sbjct: 235 KIVSGKVRFPSHF----SSDLKDLLRNLLQVDLTKRFGNLKDGVNDIKNHKWF 283
>pdb|3BHY|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With A Beta-Carboline Ligand
pdb|3BQR|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With An Imidazo-Pyridazine Ligand
Length = 283
Score = 176 bits (445), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 92/266 (34%), Positives = 150/266 (56%), Gaps = 9/266 (3%)
Query: 379 YSVGQIIGDGNFAVVRQVYDKHKDMDCALKIIDKSKLLGKK-----QMIENEVNILRSVN 433
Y +G+ +G G FA+VR+ K + A K I K +L + + IE EVNILR +
Sbjct: 7 YEMGEELGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLSSSRRGVSREEIEREVNILREIR 66
Query: 434 HPNIIKLLDEYDTNNELYLVIELIKGGDLFDAISKNVKFSEEDSKFMTQSLASALSYLHD 493
HPNII L D ++ ++ L++EL+ GG+LFD +++ +E+++ + + + YLH
Sbjct: 67 HPNIITLHDIFENKTDVVLILELVSGGELFDFLAEKESLTEDEATQFLKQILDGVHYLHS 126
Query: 494 NYIVHRDIKPENLLVEMSGCHVKVLKVGDFGLAQRVL--RPMFTVCGTPTYVAPEILNES 551
I H D+KPEN+++ +K+ DFG+A ++ + GTP +VAPEI+N
Sbjct: 127 KRIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKIEAGNEFKNIFGTPEFVAPEIVNYE 186
Query: 552 GYGVKIDVWAAGVILYILLCGFPPFVSDTNDQDELFDDILSGQYGFPSPYWDDISEEAKE 611
G++ D+W+ GVI YILL G PF+ +T + E +I + Y F Y+ + SE AK+
Sbjct: 187 PLGLEADMWSIGVITYILLSGASPFLGET--KQETLTNISAVNYDFDEEYFSNTSELAKD 244
Query: 612 LISHMLESNPDLRFSAEDVLDHPWLE 637
I +L +P R + L+H W++
Sbjct: 245 FIRRLLVKDPKRRMTIAQSLEHSWIK 270
>pdb|2F7E|E Chain E, Pka Complexed With
(S)-2-(1h-Indol-3-Yl)-1-(5-Isoquinolin-6-
Yl-Pyridin-3-Yloxymethyl-Etylamine
pdb|2F7X|E Chain E, Protein Kinase A Bound To
(s)-2-(1h-indol-3-yl)-1-[5-((e)-2-
Pyridin-4-yl-vinyl)-pyridin-3-yloxymethyl]-ethylamine
pdb|2F7Z|E Chain E, Protein Kinase A Bound To
(R)-1-(1h-Indol-3-Ylmethyl)-2-(2-
Pyridin-4-Yl-[1,7]naphtyridin-5-Yloxy)-Ehylamine
pdb|2OH0|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
pdb|2OJF|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
Length = 351
Score = 176 bits (445), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 98/293 (33%), Positives = 164/293 (55%), Gaps = 17/293 (5%)
Query: 351 TKTSVARCATATIKRRENLNIPSKLLQRYSVGQIIGDGNFAVVRQVYDKHKDMDCALKII 410
K +A+ +K+ EN + L ++ + +G G+F V V A+KI+
Sbjct: 16 VKEFLAKAKEDFLKKWENPAQNTAHLDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKIL 75
Query: 411 DKSKLLGKKQMIE--NEVNILRSVNHPNIIKLLDEYDTNNELYLVIELIKGGDLFDAISK 468
DK K++ KQ+ NE IL++VN P ++KL + N+ LY+V+E + GG++F + +
Sbjct: 76 DKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRR 135
Query: 469 NVKFSEEDSKFMTQSLASALSYLHDNYIVHRDIKPENLLVEMSGCHVKVLKVGDFGLAQR 528
+FSE ++F + YLH +++RD+KPENLL++ G ++V DFG A+R
Sbjct: 136 IGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQG----YIQVTDFGFAKR 191
Query: 529 VLRPMFTVCGTPTYVAPEILNESGYGVKIDVWAAGVILYILLCGFPPFVSDTNDQDELFD 588
V +T+CGTP Y+APEI+ GY +D WA GV++Y + G+PPF +D Q +++
Sbjct: 192 VKGRTWTLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQ--IYE 249
Query: 589 DILSGQYGFPSPYWDDISEEAKELISHMLESNPDLRF-----SAEDVLDHPWL 636
I+SG+ FPS + D+ K+L+ ++L+ + RF D+ +H W
Sbjct: 250 KIVSGKVRFPSHFSSDL----KDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWF 298
>pdb|3MFR|A Chain A, Cask-4m Cam Kinase Domain, Native
pdb|3MFS|A Chain A, Cask-4m Cam Kinase Domain, Amppnp
pdb|3MFT|A Chain A, Cask-4m Cam Kinase Domain, Mn2+
pdb|3MFU|A Chain A, Cask-4m Cam Kinase Domain, Amppnp-Mn2+
Length = 351
Score = 176 bits (445), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 96/270 (35%), Positives = 151/270 (55%), Gaps = 15/270 (5%)
Query: 379 YSVGQIIGDGNFAVVRQVYDKHKDMDCALKIIDKSKLLGKKQM----IENEVNILRSVNH 434
Y + ++IG G F+VVR+ ++ A+KI+D +K + ++ E +I + H
Sbjct: 26 YELCEVIGKGAFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASICHMLKH 85
Query: 435 PNIIKLLDEYDTNNELYLVIELIKGGDLFDAISKNVK----FSEEDSKFMTQSLASALSY 490
P+I++LL+ Y ++ LY+V E + G DL I K +SE + + + AL Y
Sbjct: 86 PHIVELLETYSSDGMLYMVFEFMDGADLCFEIVKRADAGFVYSEAVASHYMRQILEALRY 145
Query: 491 LHDNYIVHRDIKPENLLVEMSGCHVKVLKVGDFGLAQRVLRPMFTV---CGTPTYVAPEI 547
HDN I+HRD+KPEN+L+ S + +K+GDFG+A ++ GTP ++APE+
Sbjct: 146 CHDNNIIHRDVKPENVLL-ASKENSAPVKLGDFGVAIQLGESGLVAGGRVGTPHFMAPEV 204
Query: 548 LNESGYGVKIDVWAAGVILYILLCGFPPFVSDTNDQDELFDDILSGQYGFPSPYWDDISE 607
+ YG +DVW GVIL+ILL G PF ++ LF+ I+ G+Y W ISE
Sbjct: 205 VKREPYGKPVDVWGCGVILFILLSGCLPFY---GTKERLFEGIIKGKYKMNPRQWSHISE 261
Query: 608 EAKELISHMLESNPDLRFSAEDVLDHPWLE 637
AK+L+ ML +P R + + L+HPWL+
Sbjct: 262 SAKDLVRRMLMLDPAERITVYEALNHPWLK 291
>pdb|1Z9X|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
pdb|1Z9X|B Chain B, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
pdb|1Z9X|C Chain C, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
Length = 321
Score = 175 bits (444), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 94/265 (35%), Positives = 150/265 (56%), Gaps = 9/265 (3%)
Query: 379 YSVGQIIGDGNFAVVRQVYDKHKDMDCALKIIDK-----SKLLGKKQMIENEVNILRSVN 433
Y +G+ +G G FA+V++ +K ++ A K I K S+ ++ IE EV+ILR V
Sbjct: 14 YDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVL 73
Query: 434 HPNIIKLLDEYDTNNELYLVIELIKGGDLFDAISKNVKFSEEDSKFMTQSLASALSYLHD 493
H N+I L D Y+ ++ L++EL+ GG+LFD +++ SEE++ + + ++YLH
Sbjct: 74 HHNVITLHDVYENRTDVVLILELVSGGELFDFLAQKESLSEEEATSFIKQILDGVNYLHT 133
Query: 494 NYIVHRDIKPENLLVEMSGCHVKVLKVGDFGLAQRVLR--PMFTVCGTPTYVAPEILNES 551
I H D+KPEN+++ + +K+ DFGLA + + GTP +VAPEI+N
Sbjct: 134 KKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEFKNIFGTPEFVAPEIVNYE 193
Query: 552 GYGVKIDVWAAGVILYILLCGFPPFVSDTNDQDELFDDILSGQYGFPSPYWDDISEEAKE 611
G++ D+W+ GVI YILL G PF+ DT + E +I S Y F ++ SE AK+
Sbjct: 194 PLGLEADMWSIGVITYILLSGASPFLGDT--KQETLANITSVSYDFDEEFFSHTSELAKD 251
Query: 612 LISHMLESNPDLRFSAEDVLDHPWL 636
I +L R + ++ L HPW+
Sbjct: 252 FIRKLLVKETRKRLTIQEALRHPWI 276
>pdb|1SYK|A Chain A, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
pdb|1SYK|B Chain B, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
Length = 350
Score = 175 bits (444), Expect = 6e-44, Method: Compositional matrix adjust.
Identities = 97/293 (33%), Positives = 164/293 (55%), Gaps = 17/293 (5%)
Query: 351 TKTSVARCATATIKRRENLNIPSKLLQRYSVGQIIGDGNFAVVRQVYDKHKDMDCALKII 410
K +A+ +K+ E + + L ++ + +G G+F V V K A+KI+
Sbjct: 15 VKEFLAKAKEDFLKKWETPSQNTAQLDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKIL 74
Query: 411 DKSKLLGKKQMIE--NEVNILRSVNHPNIIKLLDEYDTNNELYLVIELIKGGDLFDAISK 468
DK K++ KQ+ NE IL++VN P ++KL + N+ LY+V+E + GG++F + +
Sbjct: 75 DKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRR 134
Query: 469 NVKFSEEDSKFMTQSLASALSYLHDNYIVHRDIKPENLLVEMSGCHVKVLKVGDFGLAQR 528
+FSE ++F + YLH +++RD+KPENLL++ G ++V DFG A+R
Sbjct: 135 IGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQG----YIQVTDFGFAKR 190
Query: 529 VLRPMFTVCGTPTYVAPEILNESGYGVKIDVWAAGVILYILLCGFPPFVSDTNDQDELFD 588
V + +CGTP Y+APEI+ GY +D WA GV++Y + G+PPF +D Q +++
Sbjct: 191 VKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYQMAAGYPPFFADQPIQ--IYE 248
Query: 589 DILSGQYGFPSPYWDDISEEAKELISHMLESNPDLRF-----SAEDVLDHPWL 636
I+SG+ FPS + S + K+L+ ++L+ + RF D+ +H W
Sbjct: 249 KIVSGKVRFPSHF----SSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWF 297
>pdb|1BKX|A Chain A, A Binary Complex Of The Catalytic Subunit Of
Camp-Dependent Protein Kinase And Adenosine Further
Defines Conformational Flexibility
pdb|1BX6|A Chain A, Crystal Structure Of The Potent Natural Product Inhibitor
Balanol In Complex With The Catalytic Subunit Of Camp-
Dependent Protein Kinase
Length = 350
Score = 175 bits (444), Expect = 6e-44, Method: Compositional matrix adjust.
Identities = 98/303 (32%), Positives = 168/303 (55%), Gaps = 17/303 (5%)
Query: 341 ASGREVPKMPTKTSVARCATATIKRRENLNIPSKLLQRYSVGQIIGDGNFAVVRQVYDKH 400
A+ + + K +A+ +K+ E + + L ++ + +G G+F V V K
Sbjct: 5 AAKKGXEQESVKEFLAKAKEDFLKKWETPSQNTAQLDQFDRIKTLGTGSFGRVMLVKHKE 64
Query: 401 KDMDCALKIIDKSKLLGKKQMIE--NEVNILRSVNHPNIIKLLDEYDTNNELYLVIELIK 458
A+KI+DK K++ KQ+ NE IL++VN P ++KL + N+ LY+V+E +
Sbjct: 65 SGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVA 124
Query: 459 GGDLFDAISKNVKFSEEDSKFMTQSLASALSYLHDNYIVHRDIKPENLLVEMSGCHVKVL 518
GG++F + + +FSE ++F + YLH +++RD+KPENLL++ G +
Sbjct: 125 GGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQG----YI 180
Query: 519 KVGDFGLAQRVLRPMFTVCGTPTYVAPEILNESGYGVKIDVWAAGVILYILLCGFPPFVS 578
+V DFG A+RV + +CGTP Y+APEI+ GY +D WA GV++Y + G+PPF +
Sbjct: 181 QVTDFGFAKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFA 240
Query: 579 DTNDQDELFDDILSGQYGFPSPYWDDISEEAKELISHMLESNPDLRF-----SAEDVLDH 633
D Q +++ I+SG+ FPS + S + K+L+ ++L+ + RF D+ +H
Sbjct: 241 DQPIQ--IYEKIVSGKVRFPSHF----SSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNH 294
Query: 634 PWL 636
W
Sbjct: 295 KWF 297
>pdb|2ERZ|E Chain E, Crystal Structure Of C-amp Dependent Kinase (pka) Bound To
Hydroxyfasudil
Length = 351
Score = 175 bits (444), Expect = 6e-44, Method: Compositional matrix adjust.
Identities = 97/293 (33%), Positives = 164/293 (55%), Gaps = 17/293 (5%)
Query: 351 TKTSVARCATATIKRRENLNIPSKLLQRYSVGQIIGDGNFAVVRQVYDKHKDMDCALKII 410
K +A+ +K+ E + + L ++ + +G G+F V V K A+KI+
Sbjct: 16 VKEFLAKAKEDFLKKWETPSQNTAQLDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKIL 75
Query: 411 DKSKLLGKKQMIE--NEVNILRSVNHPNIIKLLDEYDTNNELYLVIELIKGGDLFDAISK 468
DK K++ KQ+ NE IL++VN P ++KL + N+ LY+V+E + GG++F + +
Sbjct: 76 DKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRR 135
Query: 469 NVKFSEEDSKFMTQSLASALSYLHDNYIVHRDIKPENLLVEMSGCHVKVLKVGDFGLAQR 528
+FSE ++F + YLH +++RD+KPENLL++ G ++V DFG A+R
Sbjct: 136 IGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQG----YIQVTDFGFAKR 191
Query: 529 VLRPMFTVCGTPTYVAPEILNESGYGVKIDVWAAGVILYILLCGFPPFVSDTNDQDELFD 588
V + +CGTP Y+APEI+ GY +D WA GV++Y + G+PPF +D Q +++
Sbjct: 192 VKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQ--IYE 249
Query: 589 DILSGQYGFPSPYWDDISEEAKELISHMLESNPDLRF-----SAEDVLDHPWL 636
I+SG+ FPS + D+ K+L+ ++L+ + RF D+ +H W
Sbjct: 250 KIVSGKVRFPSHFSSDL----KDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWF 298
>pdb|1JBP|E Chain E, Crystal Structure Of The Catalytic Subunit Of Camp-
Dependent Protein Kinase Complexed With A Substrate
Peptide, Adp And Detergent
Length = 350
Score = 175 bits (444), Expect = 7e-44, Method: Compositional matrix adjust.
Identities = 98/303 (32%), Positives = 168/303 (55%), Gaps = 17/303 (5%)
Query: 341 ASGREVPKMPTKTSVARCATATIKRRENLNIPSKLLQRYSVGQIIGDGNFAVVRQVYDKH 400
A+ + + K +A+ +K+ E + + L ++ + +G G+F V V K
Sbjct: 5 AAKKGXEQESVKEFLAKAKEDFLKKWETPSQNTAQLDQFDRIKTLGTGSFGRVMLVKHKE 64
Query: 401 KDMDCALKIIDKSKLLGKKQMIE--NEVNILRSVNHPNIIKLLDEYDTNNELYLVIELIK 458
A+KI+DK K++ KQ+ NE IL++VN P ++KL + N+ LY+V+E +
Sbjct: 65 SGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVA 124
Query: 459 GGDLFDAISKNVKFSEEDSKFMTQSLASALSYLHDNYIVHRDIKPENLLVEMSGCHVKVL 518
GG++F + + +FSE ++F + YLH +++RD+KPENLL++ G +
Sbjct: 125 GGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQG----YI 180
Query: 519 KVGDFGLAQRVLRPMFTVCGTPTYVAPEILNESGYGVKIDVWAAGVILYILLCGFPPFVS 578
+V DFG A+RV + +CGTP Y+APEI+ GY +D WA GV++Y + G+PPF +
Sbjct: 181 QVTDFGFAKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFA 240
Query: 579 DTNDQDELFDDILSGQYGFPSPYWDDISEEAKELISHMLESNPDLRF-----SAEDVLDH 633
D Q +++ I+SG+ FPS + D+ K+L+ ++L+ + RF D+ +H
Sbjct: 241 DEPIQ--IYEKIVSGKVRFPSHFSSDL----KDLLRNLLQVDLTKRFGNLKNGVNDIKNH 294
Query: 634 PWL 636
W
Sbjct: 295 KWF 297
>pdb|1FMO|E Chain E, Crystal Structure Of A Polyhistidine-Tagged Recombinant
Catalytic Subunit Of Camp-Dependent Protein Kinase
Complexed With The Peptide Inhibitor Pki(5-24) And
Adenosine
pdb|1JLU|E Chain E, Crystal Structure Of The Catalytic Subunit Of
Camp-dependent Protein Kinase Complexed With A
Phosphorylated Substrate Peptide And Detergent
pdb|1RE8|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 2
pdb|1REJ|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 1
pdb|1REK|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 8
pdb|2QVS|E Chain E, Crystal Structure Of Type Iia Holoenzyme Of Camp-Dependent
Protein Kinase
pdb|3FJQ|E Chain E, Crystal Structure Of Camp-Dependent Protein Kinase
Catalytic Subunit Alpha In Complex With Peptide
Inhibitor Pki Alpha (6-25)
pdb|3IDB|A Chain A, Crystal Structure Of (108-268)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3IDC|A Chain A, Crystal Structure Of (102-265)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3O7L|D Chain D, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
pdb|3OW3|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|1ATP|E Chain E, 2.2 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
Mnatp And A Peptide Inhibitor
pdb|4DIN|A Chain A, Novel Localization And Quaternary Structure Of The Pka Ri
Beta Holoenzyme
Length = 350
Score = 175 bits (443), Expect = 7e-44, Method: Compositional matrix adjust.
Identities = 97/293 (33%), Positives = 164/293 (55%), Gaps = 17/293 (5%)
Query: 351 TKTSVARCATATIKRRENLNIPSKLLQRYSVGQIIGDGNFAVVRQVYDKHKDMDCALKII 410
K +A+ +K+ E + + L ++ + +G G+F V V K A+KI+
Sbjct: 15 VKEFLAKAKEDFLKKWETPSQNTAQLDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKIL 74
Query: 411 DKSKLLGKKQMIE--NEVNILRSVNHPNIIKLLDEYDTNNELYLVIELIKGGDLFDAISK 468
DK K++ KQ+ NE IL++VN P ++KL + N+ LY+V+E + GG++F + +
Sbjct: 75 DKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRR 134
Query: 469 NVKFSEEDSKFMTQSLASALSYLHDNYIVHRDIKPENLLVEMSGCHVKVLKVGDFGLAQR 528
+FSE ++F + YLH +++RD+KPENLL++ G ++V DFG A+R
Sbjct: 135 IGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQG----YIQVTDFGFAKR 190
Query: 529 VLRPMFTVCGTPTYVAPEILNESGYGVKIDVWAAGVILYILLCGFPPFVSDTNDQDELFD 588
V + +CGTP Y+APEI+ GY +D WA GV++Y + G+PPF +D Q +++
Sbjct: 191 VKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQ--IYE 248
Query: 589 DILSGQYGFPSPYWDDISEEAKELISHMLESNPDLRF-----SAEDVLDHPWL 636
I+SG+ FPS + D+ K+L+ ++L+ + RF D+ +H W
Sbjct: 249 KIVSGKVRFPSHFSSDL----KDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWF 297
>pdb|2QUR|A Chain A, Crystal Structure Of F327aK285P MUTANT OF CAMP-Dependent
Protein Kinase
Length = 350
Score = 175 bits (443), Expect = 7e-44, Method: Compositional matrix adjust.
Identities = 97/293 (33%), Positives = 164/293 (55%), Gaps = 17/293 (5%)
Query: 351 TKTSVARCATATIKRRENLNIPSKLLQRYSVGQIIGDGNFAVVRQVYDKHKDMDCALKII 410
K +A+ +K+ E + + L ++ + +G G+F V V K A+KI+
Sbjct: 15 VKEFLAKAKEDFLKKWETPSQNTAQLDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKIL 74
Query: 411 DKSKLLGKKQMIE--NEVNILRSVNHPNIIKLLDEYDTNNELYLVIELIKGGDLFDAISK 468
DK K++ KQ+ NE IL++VN P ++KL + N+ LY+V+E + GG++F + +
Sbjct: 75 DKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRR 134
Query: 469 NVKFSEEDSKFMTQSLASALSYLHDNYIVHRDIKPENLLVEMSGCHVKVLKVGDFGLAQR 528
+FSE ++F + YLH +++RD+KPENLL++ G ++V DFG A+R
Sbjct: 135 IGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQG----YIQVTDFGFAKR 190
Query: 529 VLRPMFTVCGTPTYVAPEILNESGYGVKIDVWAAGVILYILLCGFPPFVSDTNDQDELFD 588
V + +CGTP Y+APEI+ GY +D WA GV++Y + G+PPF +D Q +++
Sbjct: 191 VKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQ--IYE 248
Query: 589 DILSGQYGFPSPYWDDISEEAKELISHMLESNPDLRF-----SAEDVLDHPWL 636
I+SG+ FPS + D+ K+L+ ++L+ + RF D+ +H W
Sbjct: 249 KIVSGKVRFPSHFSSDL----KDLLRNLLQVDLTKRFGNLPNGVNDIKNHKWF 297
>pdb|3GU4|A Chain A, Crystal Structure Of Dapkq23v-Amppnp
pdb|3GU5|A Chain A, Crystal Structure Of Dapkq23v-Amppnp-Mg2+
pdb|3GU6|A Chain A, Crystal Structure Of Dapkq23v-Adp
pdb|3GU7|A Chain A, Crystal Structure Of Dapkq23v-Adp-Mg2+
Length = 295
Score = 175 bits (443), Expect = 7e-44, Method: Compositional matrix adjust.
Identities = 95/283 (33%), Positives = 159/283 (56%), Gaps = 15/283 (5%)
Query: 362 TIKRRENLNIPSKLLQRYSVGQIIGDGNFAVVRQVYDKHKDMDCALKIIDKSKLLGKKQM 421
T+ R+EN++ Y G+ +G G FAVV++ +K + A K I K + ++
Sbjct: 2 TVFRQENVD------DYYDTGEELGSGVFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRG 55
Query: 422 -----IENEVNILRSVNHPNIIKLLDEYDTNNELYLVIELIKGGDLFDAISKNVKFSEED 476
IE EV+IL+ + HPN+I L + Y+ ++ L++EL+ GG+LFD +++ +EE+
Sbjct: 56 VSREDIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEE 115
Query: 477 SKFMTQSLASALSYLHDNYIVHRDIKPENLLVEMSGCHVKVLKVGDFGLAQRV--LRPMF 534
+ + + + + YLH I H D+KPEN+++ +K+ DFGLA ++
Sbjct: 116 ATEFLKQILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFK 175
Query: 535 TVCGTPTYVAPEILNESGYGVKIDVWAAGVILYILLCGFPPFVSDTNDQDELFDDILSGQ 594
+ GTP +VAPEI+N G++ D+W+ GVI YILL G PF+ DT + E ++ +
Sbjct: 176 NIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDT--KQETLANVSAVN 233
Query: 595 YGFPSPYWDDISEEAKELISHMLESNPDLRFSAEDVLDHPWLE 637
Y F Y+ + S AK+ I +L +P R + +D L HPW++
Sbjct: 234 YEFEDEYFSNTSALAKDFIRRLLVKDPKKRMTIQDSLQHPWIK 276
>pdb|2A2A|A Chain A, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|B Chain B, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|C Chain C, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|D Chain D, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2CKE|A Chain A, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|B Chain B, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|C Chain C, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|D Chain D, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
Length = 321
Score = 175 bits (443), Expect = 8e-44, Method: Compositional matrix adjust.
Identities = 94/265 (35%), Positives = 150/265 (56%), Gaps = 9/265 (3%)
Query: 379 YSVGQIIGDGNFAVVRQVYDKHKDMDCALKIIDK-----SKLLGKKQMIENEVNILRSVN 433
Y +G+ +G G FA+V++ +K ++ A K I K S+ ++ IE EV+ILR V
Sbjct: 14 YDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVL 73
Query: 434 HPNIIKLLDEYDTNNELYLVIELIKGGDLFDAISKNVKFSEEDSKFMTQSLASALSYLHD 493
H N+I L D Y+ ++ L++EL+ GG+LFD +++ SEE++ + + ++YLH
Sbjct: 74 HHNVITLHDVYENRTDVVLILELVSGGELFDFLAQKESLSEEEATSFIKQILDGVNYLHT 133
Query: 494 NYIVHRDIKPENLLVEMSGCHVKVLKVGDFGLAQRVLR--PMFTVCGTPTYVAPEILNES 551
I H D+KPEN+++ + +K+ DFGLA + + GTP +VAPEI+N
Sbjct: 134 KKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEFKNIFGTPEFVAPEIVNYE 193
Query: 552 GYGVKIDVWAAGVILYILLCGFPPFVSDTNDQDELFDDILSGQYGFPSPYWDDISEEAKE 611
G++ D+W+ GVI YILL G PF+ DT + E +I S Y F ++ SE AK+
Sbjct: 194 PLGLEADMWSIGVITYILLSGASPFLGDT--KQETLANITSVSYDFDEEFFSHTSELAKD 251
Query: 612 LISHMLESNPDLRFSAEDVLDHPWL 636
I +L R + ++ L HPW+
Sbjct: 252 FIRKLLVKETRKRLTIQEALRHPWI 276
>pdb|2A27|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|B Chain B, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|C Chain C, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|D Chain D, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|E Chain E, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|F Chain F, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|G Chain G, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|H Chain H, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
Length = 321
Score = 175 bits (443), Expect = 8e-44, Method: Compositional matrix adjust.
Identities = 93/265 (35%), Positives = 150/265 (56%), Gaps = 9/265 (3%)
Query: 379 YSVGQIIGDGNFAVVRQVYDKHKDMDCALKIIDK-----SKLLGKKQMIENEVNILRSVN 433
Y +G+ +G G FA+V++ +K ++ A K I K S+ ++ IE EV+ILR V
Sbjct: 14 YDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVL 73
Query: 434 HPNIIKLLDEYDTNNELYLVIELIKGGDLFDAISKNVKFSEEDSKFMTQSLASALSYLHD 493
H N+I L D Y+ ++ L++EL+ GG+LFD +++ SEE++ + + ++YLH
Sbjct: 74 HHNVITLHDVYENRTDVVLILELVSGGELFDFLAQKESLSEEEATSFIKQILDGVNYLHT 133
Query: 494 NYIVHRDIKPENLLVEMSGCHVKVLKVGDFGLAQRVLR--PMFTVCGTPTYVAPEILNES 551
I H D+KPEN+++ + +K+ DFGLA + + GTP +VAPEI+N
Sbjct: 134 KKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEFKNIFGTPEFVAPEIVNYE 193
Query: 552 GYGVKIDVWAAGVILYILLCGFPPFVSDTNDQDELFDDILSGQYGFPSPYWDDISEEAKE 611
G++ D+W+ GVI YILL G PF+ DT + E +I + Y F ++ SE AK+
Sbjct: 194 PLGLEADMWSIGVITYILLSGASPFLGDT--KQETLANITAVSYDFDEEFFSQTSELAKD 251
Query: 612 LISHMLESNPDLRFSAEDVLDHPWL 636
I +L R + ++ L HPW+
Sbjct: 252 FIRKLLVKETRKRLTIQEALRHPWI 276
>pdb|3NX8|A Chain A, Human Camp Dependent Protein Kinase In Complex With Phenol
Length = 351
Score = 174 bits (442), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 97/293 (33%), Positives = 164/293 (55%), Gaps = 17/293 (5%)
Query: 351 TKTSVARCATATIKRRENLNIPSKLLQRYSVGQIIGDGNFAVVRQVYDKHKDMDCALKII 410
K +A+ +K+ E+ + L ++ + +G G+F V V K A+KI+
Sbjct: 16 VKEFLAKAKEDFLKKWESPAQNTAHLDQFERIKTLGTGSFGRVMLVKHKETGNHYAMKIL 75
Query: 411 DKSKLLGKKQMIE--NEVNILRSVNHPNIIKLLDEYDTNNELYLVIELIKGGDLFDAISK 468
DK K++ KQ+ NE IL++VN P ++KL + N+ LY+V+E + GG++F + +
Sbjct: 76 DKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRR 135
Query: 469 NVKFSEEDSKFMTQSLASALSYLHDNYIVHRDIKPENLLVEMSGCHVKVLKVGDFGLAQR 528
+FSE ++F + YLH +++RD+KPENLL++ G ++V DFG A+R
Sbjct: 136 IGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQG----YIQVTDFGFAKR 191
Query: 529 VLRPMFTVCGTPTYVAPEILNESGYGVKIDVWAAGVILYILLCGFPPFVSDTNDQDELFD 588
V + +CGTP Y+APEI+ GY +D WA GV++Y + G+PPF +D Q +++
Sbjct: 192 VKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQ--IYE 249
Query: 589 DILSGQYGFPSPYWDDISEEAKELISHMLESNPDLRF-----SAEDVLDHPWL 636
I+SG+ FPS + D+ K+L+ ++L+ + RF D+ +H W
Sbjct: 250 KIVSGKVRFPSHFSSDL----KDLLRNLLQVDLTKRFGNLKNGVNDIXNHKWF 298
>pdb|3GU8|A Chain A, Crystal Structure Of Dapkl93g With N6-Cyclopentyladenosine
pdb|3GUB|A Chain A, Crystal Structure Of Dapkl93g Complexed With N6-(2-
Phenylethyl)adenosine
Length = 295
Score = 174 bits (442), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 95/283 (33%), Positives = 158/283 (55%), Gaps = 15/283 (5%)
Query: 362 TIKRRENLNIPSKLLQRYSVGQIIGDGNFAVVRQVYDKHKDMDCALKIIDKSKLLGKKQM 421
T+ R+EN++ Y G+ +G G FAVV++ +K + A K I K + ++
Sbjct: 2 TVFRQENVD------DYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRG 55
Query: 422 -----IENEVNILRSVNHPNIIKLLDEYDTNNELYLVIELIKGGDLFDAISKNVKFSEED 476
IE EV+IL+ + HPN+I L + Y+ ++ L+ EL+ GG+LFD +++ +EE+
Sbjct: 56 VSREDIEREVSILKEIQHPNVITLHEVYENKTDVILIGELVAGGELFDFLAEKESLTEEE 115
Query: 477 SKFMTQSLASALSYLHDNYIVHRDIKPENLLVEMSGCHVKVLKVGDFGLAQRV--LRPMF 534
+ + + + + YLH I H D+KPEN+++ +K+ DFGLA ++
Sbjct: 116 ATEFLKQILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFK 175
Query: 535 TVCGTPTYVAPEILNESGYGVKIDVWAAGVILYILLCGFPPFVSDTNDQDELFDDILSGQ 594
+ GTP +VAPEI+N G++ D+W+ GVI YILL G PF+ DT + E ++ +
Sbjct: 176 NIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDT--KQETLANVSAVN 233
Query: 595 YGFPSPYWDDISEEAKELISHMLESNPDLRFSAEDVLDHPWLE 637
Y F Y+ + S AK+ I +L +P R + +D L HPW++
Sbjct: 234 YEFEDEYFSNTSALAKDFIRRLLVKDPKKRMTIQDSLQHPWIK 276
>pdb|1ZWS|A Chain A, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|B Chain B, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|C Chain C, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|D Chain D, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|E Chain E, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|F Chain F, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|G Chain G, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|H Chain H, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
Length = 288
Score = 174 bits (442), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 94/265 (35%), Positives = 150/265 (56%), Gaps = 9/265 (3%)
Query: 379 YSVGQIIGDGNFAVVRQVYDKHKDMDCALKIIDK-----SKLLGKKQMIENEVNILRSVN 433
Y +G+ +G G FA+V++ +K ++ A K I K S+ ++ IE EV+ILR V
Sbjct: 14 YDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVL 73
Query: 434 HPNIIKLLDEYDTNNELYLVIELIKGGDLFDAISKNVKFSEEDSKFMTQSLASALSYLHD 493
H N+I L D Y+ ++ L++EL+ GG+LFD +++ SEE++ + + ++YLH
Sbjct: 74 HHNVITLHDVYENRTDVVLILELVSGGELFDFLAQKESLSEEEATSFIKQILDGVNYLHT 133
Query: 494 NYIVHRDIKPENLLVEMSGCHVKVLKVGDFGLAQRVLR--PMFTVCGTPTYVAPEILNES 551
I H D+KPEN+++ + +K+ DFGLA + + GTP +VAPEI+N
Sbjct: 134 KKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEFKNIFGTPEFVAPEIVNYE 193
Query: 552 GYGVKIDVWAAGVILYILLCGFPPFVSDTNDQDELFDDILSGQYGFPSPYWDDISEEAKE 611
G++ D+W+ GVI YILL G PF+ DT + E +I S Y F ++ SE AK+
Sbjct: 194 PLGLEADMWSIGVITYILLSGASPFLGDT--KQETLANITSVSYDFDEEFFSHTSELAKD 251
Query: 612 LISHMLESNPDLRFSAEDVLDHPWL 636
I +L R + ++ L HPW+
Sbjct: 252 FIRKLLVKETRKRLTIQEALRHPWI 276
>pdb|1APM|E Chain E, 2.0 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
A Peptide Inhibitor And Detergent
Length = 350
Score = 174 bits (442), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 97/303 (32%), Positives = 168/303 (55%), Gaps = 17/303 (5%)
Query: 341 ASGREVPKMPTKTSVARCATATIKRRENLNIPSKLLQRYSVGQIIGDGNFAVVRQVYDKH 400
A+ + + K +A+ +K+ E + + L ++ + +G G+F V V K
Sbjct: 5 AAKKGXEQESVKEFLAKAKEDFLKKWETPSQNTAQLDQFDRIKTLGTGSFGRVMLVKHKE 64
Query: 401 KDMDCALKIIDKSKLLGKKQMIE--NEVNILRSVNHPNIIKLLDEYDTNNELYLVIELIK 458
A+KI+DK K++ KQ+ NE IL++VN P ++KL + N+ LY+V+E +
Sbjct: 65 SGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVA 124
Query: 459 GGDLFDAISKNVKFSEEDSKFMTQSLASALSYLHDNYIVHRDIKPENLLVEMSGCHVKVL 518
GG++F + + +F+E ++F + YLH +++RD+KPENLL++ G +
Sbjct: 125 GGEMFSHLRRIGRFAEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQG----YI 180
Query: 519 KVGDFGLAQRVLRPMFTVCGTPTYVAPEILNESGYGVKIDVWAAGVILYILLCGFPPFVS 578
+V DFG A+RV + +CGTP Y+APEI+ GY +D WA GV++Y + G+PPF +
Sbjct: 181 QVTDFGFAKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFA 240
Query: 579 DTNDQDELFDDILSGQYGFPSPYWDDISEEAKELISHMLESNPDLRF-----SAEDVLDH 633
D Q +++ I+SG+ FPS + S + K+L+ ++L+ + RF D+ +H
Sbjct: 241 DQPIQ--IYEKIVSGKVRFPSHF----SSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNH 294
Query: 634 PWL 636
W
Sbjct: 295 KWF 297
>pdb|3QAL|E Chain E, Crystal Structure Of Arg280ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 174 bits (441), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 94/289 (32%), Positives = 163/289 (56%), Gaps = 9/289 (3%)
Query: 351 TKTSVARCATATIKRRENLNIPSKLLQRYSVGQIIGDGNFAVVRQVYDKHKDMDCALKII 410
K +A+ +K+ E + + L ++ + +G G+F V V K A+KI+
Sbjct: 15 VKEFLAKAKEDFLKKWETPSQNTAQLDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKIL 74
Query: 411 DKSKLLGKKQMIE--NEVNILRSVNHPNIIKLLDEYDTNNELYLVIELIKGGDLFDAISK 468
DK K++ KQ+ NE IL++VN P ++KL + N+ LY+V+E + GG++F + +
Sbjct: 75 DKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRR 134
Query: 469 NVKFSEEDSKFMTQSLASALSYLHDNYIVHRDIKPENLLVEMSGCHVKVLKVGDFGLAQR 528
+FSE ++F + YLH +++RD+KPENLL++ G ++V DFG A+R
Sbjct: 135 IGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQG----YIQVTDFGFAKR 190
Query: 529 VLRPMFTVCGTPTYVAPEILNESGYGVKIDVWAAGVILYILLCGFPPFVSDTNDQDELFD 588
V + +CGTP Y+APEI+ GY +D WA GV++Y + G+PPF +D Q +++
Sbjct: 191 VKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQ--IYE 248
Query: 589 DILSGQYGFPSPYWDDISEEAKELIS-HMLESNPDLRFSAEDVLDHPWL 636
I+SG+ FPS + D+ + + L+ + ++ +L+ D+ +H W
Sbjct: 249 KIVSGKVRFPSHFSSDLKDLLRNLLQVDLTKAFGNLKNGVNDIKNHKWF 297
>pdb|3O7L|B Chain B, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
Length = 350
Score = 174 bits (441), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 96/293 (32%), Positives = 164/293 (55%), Gaps = 17/293 (5%)
Query: 351 TKTSVARCATATIKRRENLNIPSKLLQRYSVGQIIGDGNFAVVRQVYDKHKDMDCALKII 410
K +A+ +K+ E + + L ++ + +G G+F V V K A+KI+
Sbjct: 15 VKEFLAKAKEDFLKKWETPSQNTAQLDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKIL 74
Query: 411 DKSKLLGKKQMIE--NEVNILRSVNHPNIIKLLDEYDTNNELYLVIELIKGGDLFDAISK 468
DK K++ KQ+ NE IL++VN P ++KL + N+ LY+V+E + GG++F + +
Sbjct: 75 DKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRR 134
Query: 469 NVKFSEEDSKFMTQSLASALSYLHDNYIVHRDIKPENLLVEMSGCHVKVLKVGDFGLAQR 528
+FSE ++F + YLH +++RD+KPENL+++ G ++V DFG A+R
Sbjct: 135 IGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLIIDQQG----YIQVTDFGFAKR 190
Query: 529 VLRPMFTVCGTPTYVAPEILNESGYGVKIDVWAAGVILYILLCGFPPFVSDTNDQDELFD 588
V + +CGTP Y+APEI+ GY +D WA GV++Y + G+PPF +D Q +++
Sbjct: 191 VKGRTWXLCGTPEYLAPEIIISKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQ--IYE 248
Query: 589 DILSGQYGFPSPYWDDISEEAKELISHMLESNPDLRF-----SAEDVLDHPWL 636
I+SG+ FPS + D+ K+L+ ++L+ + RF D+ +H W
Sbjct: 249 KIVSGKVRFPSHFSSDL----KDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWF 297
>pdb|1WMK|A Chain A, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|E Chain E, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|C Chain C, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|B Chain B, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|F Chain F, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|D Chain D, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|H Chain H, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|G Chain G, Human Death-Associated Kinase Drp-1, Mutant S308d D40
Length = 321
Score = 174 bits (441), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 93/265 (35%), Positives = 150/265 (56%), Gaps = 9/265 (3%)
Query: 379 YSVGQIIGDGNFAVVRQVYDKHKDMDCALKIIDK-----SKLLGKKQMIENEVNILRSVN 433
Y +G+ +G G FA+V++ +K ++ A K I K S+ ++ IE EV+ILR V
Sbjct: 14 YDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVL 73
Query: 434 HPNIIKLLDEYDTNNELYLVIELIKGGDLFDAISKNVKFSEEDSKFMTQSLASALSYLHD 493
H N+I L D Y+ ++ L++EL+ GG+LFD +++ SEE++ + + ++YLH
Sbjct: 74 HHNVITLHDVYENRTDVVLILELVSGGELFDFLAQKESLSEEEATSFIKQILDGVNYLHT 133
Query: 494 NYIVHRDIKPENLLVEMSGCHVKVLKVGDFGLAQRVLR--PMFTVCGTPTYVAPEILNES 551
I H D+KPEN+++ + +K+ DFGLA + + GTP +VAPEI+N
Sbjct: 134 KKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEFKNIFGTPEFVAPEIVNYE 193
Query: 552 GYGVKIDVWAAGVILYILLCGFPPFVSDTNDQDELFDDILSGQYGFPSPYWDDISEEAKE 611
G++ D+W+ GVI YILL G PF+ DT + E +I + Y F ++ SE AK+
Sbjct: 194 PLGLEADMWSIGVITYILLSGASPFLGDT--KQETLANITAVSYDFDEEFFSQTSELAKD 251
Query: 612 LISHMLESNPDLRFSAEDVLDHPWL 636
I +L R + ++ L HPW+
Sbjct: 252 FIRKLLVKETRKRLTIQEALRHPWI 276
>pdb|4AE6|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
pdb|4AE6|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
Length = 343
Score = 174 bits (441), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 97/293 (33%), Positives = 164/293 (55%), Gaps = 17/293 (5%)
Query: 351 TKTSVARCATATIKRRENLNIPSKLLQRYSVGQIIGDGNFAVVRQVYDKHKDMDCALKII 410
K +A+ +K+ E+ + L ++ + +G G+F V V K A+KI+
Sbjct: 8 VKEFLAKAKEDFLKKWESPAQNTAHLDQFERIKTLGTGSFGRVMLVKHKETGNHYAMKIL 67
Query: 411 DKSKLLGKKQMIE--NEVNILRSVNHPNIIKLLDEYDTNNELYLVIELIKGGDLFDAISK 468
DK K++ KQ+ NE IL++VN P ++KL + N+ LY+V+E + GG++F + +
Sbjct: 68 DKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRR 127
Query: 469 NVKFSEEDSKFMTQSLASALSYLHDNYIVHRDIKPENLLVEMSGCHVKVLKVGDFGLAQR 528
+FSE ++F + YLH +++RD+KPENLL++ G ++V DFG A+R
Sbjct: 128 IGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQG----YIQVTDFGFAKR 183
Query: 529 VLRPMFTVCGTPTYVAPEILNESGYGVKIDVWAAGVILYILLCGFPPFVSDTNDQDELFD 588
V + +CGTP Y+APEI+ GY +D WA GV++Y + G+PPF +D Q +++
Sbjct: 184 VKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQ--IYE 241
Query: 589 DILSGQYGFPSPYWDDISEEAKELISHMLESNPDLRF-----SAEDVLDHPWL 636
I+SG+ FPS + S + K+L+ ++L+ + RF D+ +H W
Sbjct: 242 KIVSGKVRFPSHF----SSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWF 290
>pdb|3AGL|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3AGL|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3VQH|A Chain A, Bromine Sad Partially Resolves Multiple Binding Modes For
Pka Inhibitor H-89
Length = 351
Score = 174 bits (441), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 98/303 (32%), Positives = 168/303 (55%), Gaps = 17/303 (5%)
Query: 341 ASGREVPKMPTKTSVARCATATIKRRENLNIPSKLLQRYSVGQIIGDGNFAVVRQVYDKH 400
A+ + + K +A+ +K+ E+ + L ++ + +G G+F V V K
Sbjct: 6 AAKKGXEQESVKEFLAKAKEDFLKKWESPAQNTAHLDQFERIKTLGTGSFGRVMLVKHKE 65
Query: 401 KDMDCALKIIDKSKLLGKKQMIE--NEVNILRSVNHPNIIKLLDEYDTNNELYLVIELIK 458
A+KI+DK K++ KQ+ NE IL++VN P ++KL + N+ LY+V+E +
Sbjct: 66 TGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVP 125
Query: 459 GGDLFDAISKNVKFSEEDSKFMTQSLASALSYLHDNYIVHRDIKPENLLVEMSGCHVKVL 518
GG++F + + +FSE ++F + YLH +++RD+KPENLL++ G +
Sbjct: 126 GGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQG----YI 181
Query: 519 KVGDFGLAQRVLRPMFTVCGTPTYVAPEILNESGYGVKIDVWAAGVILYILLCGFPPFVS 578
+V DFG A+RV + +CGTP Y+APEI+ GY +D WA GV++Y + G+PPF +
Sbjct: 182 QVTDFGFAKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFA 241
Query: 579 DTNDQDELFDDILSGQYGFPSPYWDDISEEAKELISHMLESNPDLRF-----SAEDVLDH 633
D Q +++ I+SG+ FPS + D+ K+L+ ++L+ + RF D+ +H
Sbjct: 242 DQPIQ--IYEKIVSGKVRFPSHFSSDL----KDLLRNLLQVDLTKRFGNLKNGVNDIKNH 295
Query: 634 PWL 636
W
Sbjct: 296 KWF 298
>pdb|2GU8|A Chain A, Discovery Of 2-pyrimidyl-5-amidothiophenes As Novel And
Potent Inhibitors For Akt: Synthesis And Sar Studies
Length = 337
Score = 174 bits (441), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 97/293 (33%), Positives = 164/293 (55%), Gaps = 17/293 (5%)
Query: 351 TKTSVARCATATIKRRENLNIPSKLLQRYSVGQIIGDGNFAVVRQVYDKHKDMDCALKII 410
K +A+ +K+ E + + L ++ + +G G+F V V K A+KI+
Sbjct: 2 VKEFLAKAKEDFLKKWETPSQNTAQLDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKIL 61
Query: 411 DKSKLLGKKQMIE--NEVNILRSVNHPNIIKLLDEYDTNNELYLVIELIKGGDLFDAISK 468
DK K++ KQ+ NE IL++VN P ++KL + N+ LY+V+E + GG++F + +
Sbjct: 62 DKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRR 121
Query: 469 NVKFSEEDSKFMTQSLASALSYLHDNYIVHRDIKPENLLVEMSGCHVKVLKVGDFGLAQR 528
+FSE ++F + YLH +++RD+KPENLL++ G ++V DFG A+R
Sbjct: 122 IGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDEQG----YIQVTDFGFAKR 177
Query: 529 VLRPMFTVCGTPTYVAPEILNESGYGVKIDVWAAGVILYILLCGFPPFVSDTNDQDELFD 588
V + +CGTP Y+APEI+ GY +D WA GV++Y + G+PPF +D Q +++
Sbjct: 178 VKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQ--IYE 235
Query: 589 DILSGQYGFPSPYWDDISEEAKELISHMLESNPDLRF-----SAEDVLDHPWL 636
I+SG+ FPS + S + K+L+ ++L+ + RF D+ +H W
Sbjct: 236 KIVSGKVRFPSHF----SSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWF 284
>pdb|1YRP|A Chain A, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
pdb|1YRP|B Chain B, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
Length = 278
Score = 174 bits (441), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 92/266 (34%), Positives = 149/266 (56%), Gaps = 9/266 (3%)
Query: 379 YSVGQIIGDGNFAVVRQVYDKHKDMDCALKIIDKSKLLGKK-----QMIENEVNILRSVN 433
Y +G+ +G G FA+VR+ K + A K I K +L + + IE EVNILR +
Sbjct: 14 YEMGEELGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLSSSRRGVSREEIEREVNILREIR 73
Query: 434 HPNIIKLLDEYDTNNELYLVIELIKGGDLFDAISKNVKFSEEDSKFMTQSLASALSYLHD 493
HPNII L D ++ ++ L++EL+ GG+LFD +++ +E+++ + + + YLH
Sbjct: 74 HPNIITLHDIFENKTDVVLILELVSGGELFDFLAEKESLTEDEATQFLKQILDGVHYLHS 133
Query: 494 NYIVHRDIKPENLLVEMSGCHVKVLKVGDFGLAQRVL--RPMFTVCGTPTYVAPEILNES 551
I H D+KPEN+++ +K+ DFG+A ++ + GTP +VAPEI+N
Sbjct: 134 KRIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKIEAGNEFKNIFGTPEFVAPEIVNYE 193
Query: 552 GYGVKIDVWAAGVILYILLCGFPPFVSDTNDQDELFDDILSGQYGFPSPYWDDISEEAKE 611
G++ D+W+ GVI YILL G PF+ +T + E +I + Y F Y+ + SE AK+
Sbjct: 194 PLGLEADMWSIGVITYILLSGASPFLGET--KQETLTNISAVNYDFDEEYFSNTSELAKD 251
Query: 612 LISHMLESNPDLRFSAEDVLDHPWLE 637
I +L +P R L+H W++
Sbjct: 252 FIRRLLVKDPKRRMXIAQSLEHSWIK 277
>pdb|3AGM|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-670
pdb|3L9L|A Chain A, Crystal Structure Of Pka With Compound 36
pdb|3L9L|B Chain B, Crystal Structure Of Pka With Compound 36
pdb|3OOG|A Chain A, Human Camp-Dependent Protein Kinase In Complex With A
Small Fragment
pdb|3OVV|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OWP|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OXT|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3P0M|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3POO|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
Length = 351
Score = 174 bits (441), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 97/293 (33%), Positives = 164/293 (55%), Gaps = 17/293 (5%)
Query: 351 TKTSVARCATATIKRRENLNIPSKLLQRYSVGQIIGDGNFAVVRQVYDKHKDMDCALKII 410
K +A+ +K+ E+ + L ++ + +G G+F V V K A+KI+
Sbjct: 16 VKEFLAKAKEDFLKKWESPAQNTAHLDQFERIKTLGTGSFGRVMLVKHKETGNHYAMKIL 75
Query: 411 DKSKLLGKKQMIE--NEVNILRSVNHPNIIKLLDEYDTNNELYLVIELIKGGDLFDAISK 468
DK K++ KQ+ NE IL++VN P ++KL + N+ LY+V+E + GG++F + +
Sbjct: 76 DKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRR 135
Query: 469 NVKFSEEDSKFMTQSLASALSYLHDNYIVHRDIKPENLLVEMSGCHVKVLKVGDFGLAQR 528
+FSE ++F + YLH +++RD+KPENLL++ G ++V DFG A+R
Sbjct: 136 IGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQG----YIQVTDFGFAKR 191
Query: 529 VLRPMFTVCGTPTYVAPEILNESGYGVKIDVWAAGVILYILLCGFPPFVSDTNDQDELFD 588
V + +CGTP Y+APEI+ GY +D WA GV++Y + G+PPF +D Q +++
Sbjct: 192 VKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQ--IYE 249
Query: 589 DILSGQYGFPSPYWDDISEEAKELISHMLESNPDLRF-----SAEDVLDHPWL 636
I+SG+ FPS + D+ K+L+ ++L+ + RF D+ +H W
Sbjct: 250 KIVSGKVRFPSHFSSDL----KDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWF 298
>pdb|3MVJ|A Chain A, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|B Chain B, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|E Chain E, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
Length = 371
Score = 174 bits (440), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 97/293 (33%), Positives = 164/293 (55%), Gaps = 17/293 (5%)
Query: 351 TKTSVARCATATIKRRENLNIPSKLLQRYSVGQIIGDGNFAVVRQVYDKHKDMDCALKII 410
K +A+ +K+ E+ + L ++ + +G G+F V V K A+KI+
Sbjct: 36 VKEFLAKAKEDFLKKWESPAQNTAHLDQFERIKTLGTGSFGRVMLVKHKETGNHYAMKIL 95
Query: 411 DKSKLLGKKQMIE--NEVNILRSVNHPNIIKLLDEYDTNNELYLVIELIKGGDLFDAISK 468
DK K++ KQ+ NE IL++VN P ++KL + N+ LY+V+E + GG++F + +
Sbjct: 96 DKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRR 155
Query: 469 NVKFSEEDSKFMTQSLASALSYLHDNYIVHRDIKPENLLVEMSGCHVKVLKVGDFGLAQR 528
+FSE ++F + YLH +++RD+KPENLL++ G ++V DFG A+R
Sbjct: 156 IGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQG----YIQVTDFGFAKR 211
Query: 529 VLRPMFTVCGTPTYVAPEILNESGYGVKIDVWAAGVILYILLCGFPPFVSDTNDQDELFD 588
V + +CGTP Y+APEI+ GY +D WA GV++Y + G+PPF +D Q +++
Sbjct: 212 VKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQ--IYE 269
Query: 589 DILSGQYGFPSPYWDDISEEAKELISHMLESNPDLRF-----SAEDVLDHPWL 636
I+SG+ FPS + D+ K+L+ ++L+ + RF D+ +H W
Sbjct: 270 KIVSGKVRFPSHFSSDL----KDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWF 318
>pdb|1YDT|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H89 Protein
Kinase Inhibitor N-[2-
(4-Bromocinnamylamino)ethyl]-5-Isoquinoline
pdb|1YDR|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H7 Protein
Kinase Inhibitor 1-(5-
Isoquinolinesulfonyl)-2-Methylpiperazine
pdb|1YDS|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H8 Protein
Kinase Inhibitor [n-(2-Methylamino)ethyl]-5-
Isoquinolinesulfonamide
Length = 350
Score = 174 bits (440), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 97/293 (33%), Positives = 163/293 (55%), Gaps = 17/293 (5%)
Query: 351 TKTSVARCATATIKRRENLNIPSKLLQRYSVGQIIGDGNFAVVRQVYDKHKDMDCALKII 410
K +A+ +K+ EN + L ++ + +G G+F V V A+KI+
Sbjct: 15 VKEFLAKAKEDFLKKWENPAQNTAHLDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKIL 74
Query: 411 DKSKLLGKKQMIE--NEVNILRSVNHPNIIKLLDEYDTNNELYLVIELIKGGDLFDAISK 468
DK K++ KQ+ NE IL++VN P ++KL + N+ LY+V+E + GG++F + +
Sbjct: 75 DKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRR 134
Query: 469 NVKFSEEDSKFMTQSLASALSYLHDNYIVHRDIKPENLLVEMSGCHVKVLKVGDFGLAQR 528
+FSE ++F + YLH +++RD+KPENLL++ G ++V DFG A+R
Sbjct: 135 IGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQG----YIQVTDFGFAKR 190
Query: 529 VLRPMFTVCGTPTYVAPEILNESGYGVKIDVWAAGVILYILLCGFPPFVSDTNDQDELFD 588
V + +CGTP Y+APEI+ GY +D WA GV++Y + G+PPF +D Q +++
Sbjct: 191 VKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQ--IYE 248
Query: 589 DILSGQYGFPSPYWDDISEEAKELISHMLESNPDLRF-----SAEDVLDHPWL 636
I+SG+ FPS + D+ K+L+ ++L+ + RF D+ +H W
Sbjct: 249 KIVSGKVRFPSHFSSDL----KDLLRNLLQVDLTKRFGNLKDGVNDIKNHKWF 297
>pdb|1L3R|E Chain E, Crystal Structure Of A Transition State Mimic Of The
Catalytic Subunit Of Camp-Dependent Protein Kinase
pdb|3TNP|C Chain C, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNP|F Chain F, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNQ|B Chain B, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
Length = 350
Score = 174 bits (440), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 97/303 (32%), Positives = 167/303 (55%), Gaps = 17/303 (5%)
Query: 341 ASGREVPKMPTKTSVARCATATIKRRENLNIPSKLLQRYSVGQIIGDGNFAVVRQVYDKH 400
A+ + + K +A+ +K+ E + + L ++ + +G G+F V V K
Sbjct: 5 AAKKGXEQESVKEFLAKAKEDFLKKWETPSQNTAQLDQFDRIKTLGTGSFGRVMLVKHKE 64
Query: 401 KDMDCALKIIDKSKLLGKKQMIE--NEVNILRSVNHPNIIKLLDEYDTNNELYLVIELIK 458
A+KI+DK K++ KQ+ NE IL++VN P ++KL + N+ LY+V+E +
Sbjct: 65 SGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVA 124
Query: 459 GGDLFDAISKNVKFSEEDSKFMTQSLASALSYLHDNYIVHRDIKPENLLVEMSGCHVKVL 518
GG++F + + +F E ++F + YLH +++RD+KPENLL++ G +
Sbjct: 125 GGEMFSHLRRIGRFXEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQG----YI 180
Query: 519 KVGDFGLAQRVLRPMFTVCGTPTYVAPEILNESGYGVKIDVWAAGVILYILLCGFPPFVS 578
+V DFG A+RV + +CGTP Y+APEI+ GY +D WA GV++Y + G+PPF +
Sbjct: 181 QVTDFGFAKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFA 240
Query: 579 DTNDQDELFDDILSGQYGFPSPYWDDISEEAKELISHMLESNPDLRF-----SAEDVLDH 633
D Q +++ I+SG+ FPS + S + K+L+ ++L+ + RF D+ +H
Sbjct: 241 DQPIQ--IYEKIVSGKVRFPSHF----SSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNH 294
Query: 634 PWL 636
W
Sbjct: 295 KWF 297
>pdb|1SVH|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 8
pdb|1XH5|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH6|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH8|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|2GFC|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 174 bits (440), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 97/293 (33%), Positives = 163/293 (55%), Gaps = 17/293 (5%)
Query: 351 TKTSVARCATATIKRRENLNIPSKLLQRYSVGQIIGDGNFAVVRQVYDKHKDMDCALKII 410
K +A+ +K+ EN + L ++ + +G G+F V V A+KI+
Sbjct: 15 VKEFLAKAKEDFLKKWENPAQNTAHLDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKIL 74
Query: 411 DKSKLLGKKQMIE--NEVNILRSVNHPNIIKLLDEYDTNNELYLVIELIKGGDLFDAISK 468
DK K++ KQ+ NE IL++VN P ++KL + N+ LY+V+E + GG++F + +
Sbjct: 75 DKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRR 134
Query: 469 NVKFSEEDSKFMTQSLASALSYLHDNYIVHRDIKPENLLVEMSGCHVKVLKVGDFGLAQR 528
+FSE ++F + YLH +++RD+KPENLL++ G ++V DFG A+R
Sbjct: 135 IGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQG----YIQVTDFGFAKR 190
Query: 529 VLRPMFTVCGTPTYVAPEILNESGYGVKIDVWAAGVILYILLCGFPPFVSDTNDQDELFD 588
V + +CGTP Y+APEI+ GY +D WA GV++Y + G+PPF +D Q +++
Sbjct: 191 VKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQ--IYE 248
Query: 589 DILSGQYGFPSPYWDDISEEAKELISHMLESNPDLRF-----SAEDVLDHPWL 636
I+SG+ FPS + D+ K+L+ ++L+ + RF D+ +H W
Sbjct: 249 KIVSGKVRFPSHFSSDL----KDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWF 297
>pdb|3DND|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
pdb|3DNE|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 173 bits (439), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 97/293 (33%), Positives = 163/293 (55%), Gaps = 17/293 (5%)
Query: 351 TKTSVARCATATIKRRENLNIPSKLLQRYSVGQIIGDGNFAVVRQVYDKHKDMDCALKII 410
K +A+ +K+ EN + L ++ + +G G+F V V A+KI+
Sbjct: 15 VKEFLAKAKEDFLKKWENPAQNTAHLDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKIL 74
Query: 411 DKSKLLGKKQMIE--NEVNILRSVNHPNIIKLLDEYDTNNELYLVIELIKGGDLFDAISK 468
DK K++ KQ+ NE IL++VN P ++KL + N+ LY+V+E + GG++F + +
Sbjct: 75 DKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRR 134
Query: 469 NVKFSEEDSKFMTQSLASALSYLHDNYIVHRDIKPENLLVEMSGCHVKVLKVGDFGLAQR 528
+FSE ++F + YLH +++RD+KPENLL++ G ++V DFG A+R
Sbjct: 135 IGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQG----YIQVTDFGFAKR 190
Query: 529 VLRPMFTVCGTPTYVAPEILNESGYGVKIDVWAAGVILYILLCGFPPFVSDTNDQDELFD 588
V + +CGTP Y+APEI+ GY +D WA GV++Y + G+PPF +D Q +++
Sbjct: 191 VKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQ--IYE 248
Query: 589 DILSGQYGFPSPYWDDISEEAKELISHMLESNPDLRF-----SAEDVLDHPWL 636
I+SG+ FPS + S + K+L+ ++L+ + RF D+ +H W
Sbjct: 249 KIVSGKVRFPSHF----SSDLKDLLRNLLQVDLTKRFGNLKDGVNDIKNHKWF 297
>pdb|2C1A|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
Isoquinoline-5-Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl)amide
pdb|2C1B|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
(4r,2s)-5'-(4-(4-Chlorobenzyloxy)pyrrolidin-2-
Ylmethanesulfonyl)isoquinoline
pdb|2VO7|A Chain A, Structure Of Pka Complexed With 4-(4-Chlorobenzyl)-1-(7h-
Pyrrolo(2,3-D)pyrimidin-4-Yl)piperidin-4-Ylamine
pdb|3AG9|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
pdb|3AG9|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
Length = 351
Score = 173 bits (439), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 97/293 (33%), Positives = 163/293 (55%), Gaps = 17/293 (5%)
Query: 351 TKTSVARCATATIKRRENLNIPSKLLQRYSVGQIIGDGNFAVVRQVYDKHKDMDCALKII 410
K +A+ +K+ EN + L ++ + +G G+F V V A+KI+
Sbjct: 16 VKEFLAKAKEDFLKKWENPAQNTAHLDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKIL 75
Query: 411 DKSKLLGKKQMIE--NEVNILRSVNHPNIIKLLDEYDTNNELYLVIELIKGGDLFDAISK 468
DK K++ KQ+ NE IL++VN P ++KL + N+ LY+V+E + GG++F + +
Sbjct: 76 DKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRR 135
Query: 469 NVKFSEEDSKFMTQSLASALSYLHDNYIVHRDIKPENLLVEMSGCHVKVLKVGDFGLAQR 528
+FSE ++F + YLH +++RD+KPENLL++ G ++V DFG A+R
Sbjct: 136 IGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQG----YIQVTDFGFAKR 191
Query: 529 VLRPMFTVCGTPTYVAPEILNESGYGVKIDVWAAGVILYILLCGFPPFVSDTNDQDELFD 588
V + +CGTP Y+APEI+ GY +D WA GV++Y + G+PPF +D Q +++
Sbjct: 192 VKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQ--IYE 249
Query: 589 DILSGQYGFPSPYWDDISEEAKELISHMLESNPDLRF-----SAEDVLDHPWL 636
I+SG+ FPS + D+ K+L+ ++L+ + RF D+ +H W
Sbjct: 250 KIVSGKVRFPSHFSSDL----KDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWF 298
>pdb|1STC|E Chain E, Camp-Dependent Protein Kinase, Alpha-Catalytic Subunit In
Complex With Staurosporine
pdb|1Q8T|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase
(Pka) In Complex With Rho-Kinase Inhibitor Y-27632
pdb|1Q8U|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor H-1152p
pdb|1SVE|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 1
pdb|1SVG|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 4
pdb|1VEB|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 5
pdb|3E8C|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|C Chain C, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|D Chain D, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|F Chain F, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8E|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|I Chain I, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|L Chain L, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|P Chain P, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
Length = 350
Score = 173 bits (439), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 98/303 (32%), Positives = 167/303 (55%), Gaps = 17/303 (5%)
Query: 341 ASGREVPKMPTKTSVARCATATIKRRENLNIPSKLLQRYSVGQIIGDGNFAVVRQVYDKH 400
A+ + + K +A+ +K+ EN + L ++ + +G G+F V V
Sbjct: 5 AAKKGXEQESVKEFLAKAKEDFLKKWENPAQNTAHLDQFERIKTLGTGSFGRVMLVKHME 64
Query: 401 KDMDCALKIIDKSKLLGKKQMIE--NEVNILRSVNHPNIIKLLDEYDTNNELYLVIELIK 458
A+KI+DK K++ KQ+ NE IL++VN P ++KL + N+ LY+V+E +
Sbjct: 65 TGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVP 124
Query: 459 GGDLFDAISKNVKFSEEDSKFMTQSLASALSYLHDNYIVHRDIKPENLLVEMSGCHVKVL 518
GG++F + + +FSE ++F + YLH +++RD+KPENLL++ G +
Sbjct: 125 GGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQG----YI 180
Query: 519 KVGDFGLAQRVLRPMFTVCGTPTYVAPEILNESGYGVKIDVWAAGVILYILLCGFPPFVS 578
+V DFG A+RV + +CGTP Y+APEI+ GY +D WA GV++Y + G+PPF +
Sbjct: 181 QVTDFGFAKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFA 240
Query: 579 DTNDQDELFDDILSGQYGFPSPYWDDISEEAKELISHMLESNPDLRF-----SAEDVLDH 633
D Q +++ I+SG+ FPS + D+ K+L+ ++L+ + RF D+ +H
Sbjct: 241 DQPIQ--IYEKIVSGKVRFPSHFSSDL----KDLLRNLLQVDLTKRFGNLKNGVNDIKNH 294
Query: 634 PWL 636
W
Sbjct: 295 KWF 297
>pdb|3FHR|A Chain A, High Resolution Crystal Structure Of Mitogen-Activated
Protein Kinase-Activated Protein Kinase 3
(Mk3)-Inhibitor Complex
pdb|3FXW|A Chain A, High Resolution Crystal Structure Of Mitogen-Activated
Protein Kinase- Activated Protein Kinase 3INHIBITOR 2
COMPLEX
Length = 336
Score = 173 bits (439), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 95/266 (35%), Positives = 156/266 (58%), Gaps = 15/266 (5%)
Query: 383 QIIGDGNFAVVRQVYDKHKDMDCALKIIDKSKLLGKKQMIENEVNILRSVNHPNIIKLLD 442
Q++G G V + + + CALK++ S +Q +++ ++ P+I+ +LD
Sbjct: 35 QVLGLGVNGKVLECFHRRTGQKCALKLLYDSP--KARQEVDHH---WQASGGPHIVCILD 89
Query: 443 EYDTNNE----LYLVIELIKGGDLFDAISK--NVKFSEEDSKFMTQSLASALSYLHDNYI 496
Y+ + L +++E ++GG+LF I + + F+E ++ + + + +A+ +LH + I
Sbjct: 90 VYENMHHGKRCLLIIMECMEGGELFSRIQERGDQAFTEREAAEIMRDIGTAIQFLHSHNI 149
Query: 497 VHRDIKPENLLVEMSGCHVKVLKVGDFGLAQRVLR-PMFTVCGTPTYVAPEILNESGYGV 555
HRD+KPENLL S VLK+ DFG A+ + + T C TP YVAPE+L Y
Sbjct: 150 AHRDVKPENLLY-TSKEKDAVLKLTDFGFAKETTQNALQTPCYTPYYVAPEVLGPEKYDK 208
Query: 556 KIDVWAAGVILYILLCGFPPFVSDTND--QDELFDDILSGQYGFPSPYWDDISEEAKELI 613
D+W+ GVI+YILLCGFPPF S+T + I GQYGFP+P W ++SE+AK+LI
Sbjct: 209 SCDMWSLGVIMYILLCGFPPFYSNTGQAISPGMKRRIRLGQYGFPNPEWSEVSEDAKQLI 268
Query: 614 SHMLESNPDLRFSAEDVLDHPWLERS 639
+L+++P R + ++HPW+ +S
Sbjct: 269 RLLLKTDPTERLTITQFMNHPWINQS 294
>pdb|2QCS|A Chain A, A Complex Structure Between The Catalytic And Regulatory
Subunit Of Protein Kinase A That Represents The
Inhibited State
pdb|2CPK|E Chain E, Crystal Structure Of The Catalytic Subunit Of Cyclic
Adenosine Monophosphate-Dependent Protein Kinase
pdb|4DG0|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20 And
Amp-Pnp
pdb|4DG2|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20
pdb|4DH1|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With Low Mg2+, Atp And Ip20
pdb|4DH3|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Atp And Ip20
pdb|4DH5|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Adp,
Phosphate, And Ip20
pdb|4DH7|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20'
pdb|4DH8|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20
Length = 350
Score = 173 bits (439), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 96/293 (32%), Positives = 163/293 (55%), Gaps = 17/293 (5%)
Query: 351 TKTSVARCATATIKRRENLNIPSKLLQRYSVGQIIGDGNFAVVRQVYDKHKDMDCALKII 410
K +A+ +K+ E + + L ++ + +G G+F V V K A+KI+
Sbjct: 15 VKEFLAKAKEDFLKKWETPSQNTAQLDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKIL 74
Query: 411 DKSKLLGKKQMIE--NEVNILRSVNHPNIIKLLDEYDTNNELYLVIELIKGGDLFDAISK 468
DK K++ KQ+ NE IL++VN P ++KL + N+ LY+V+E + GG++F + +
Sbjct: 75 DKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRR 134
Query: 469 NVKFSEEDSKFMTQSLASALSYLHDNYIVHRDIKPENLLVEMSGCHVKVLKVGDFGLAQR 528
+F E ++F + YLH +++RD+KPENLL++ G ++V DFG A+R
Sbjct: 135 IGRFXEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQG----YIQVTDFGFAKR 190
Query: 529 VLRPMFTVCGTPTYVAPEILNESGYGVKIDVWAAGVILYILLCGFPPFVSDTNDQDELFD 588
V + +CGTP Y+APEI+ GY +D WA GV++Y + G+PPF +D Q +++
Sbjct: 191 VKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQ--IYE 248
Query: 589 DILSGQYGFPSPYWDDISEEAKELISHMLESNPDLRF-----SAEDVLDHPWL 636
I+SG+ FPS + S + K+L+ ++L+ + RF D+ +H W
Sbjct: 249 KIVSGKVRFPSHF----SSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWF 297
>pdb|4DFX|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
And Amp-Pnp
pdb|4DFZ|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
Length = 350
Score = 173 bits (439), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 96/293 (32%), Positives = 163/293 (55%), Gaps = 17/293 (5%)
Query: 351 TKTSVARCATATIKRRENLNIPSKLLQRYSVGQIIGDGNFAVVRQVYDKHKDMDCALKII 410
K +A+ +K+ E + + L ++ + +G G+F V V K A+KI+
Sbjct: 15 VKEFLAKAKEDFLKKWETPSQNTAQLDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKIL 74
Query: 411 DKSKLLGKKQMIE--NEVNILRSVNHPNIIKLLDEYDTNNELYLVIELIKGGDLFDAISK 468
DK K++ KQ+ NE IL++VN P ++KL + N+ LY+V+E + GG++F + +
Sbjct: 75 DKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRR 134
Query: 469 NVKFSEEDSKFMTQSLASALSYLHDNYIVHRDIKPENLLVEMSGCHVKVLKVGDFGLAQR 528
+F E ++F + YLH +++RD+KPENLL++ G ++V DFG A+R
Sbjct: 135 IGRFXEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQG----YIQVTDFGFAKR 190
Query: 529 VLRPMFTVCGTPTYVAPEILNESGYGVKIDVWAAGVILYILLCGFPPFVSDTNDQDELFD 588
V + +CGTP Y+APEI+ GY +D WA GV++Y + G+PPF +D Q +++
Sbjct: 191 VKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQ--IYE 248
Query: 589 DILSGQYGFPSPYWDDISEEAKELISHMLESNPDLRF-----SAEDVLDHPWL 636
I+SG+ FPS + S + K+L+ ++L+ + RF D+ +H W
Sbjct: 249 KIVSGKVRFPSHF----SSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWF 297
>pdb|3L9M|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9M|B Chain B, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9N|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 27
Length = 351
Score = 173 bits (439), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 97/293 (33%), Positives = 163/293 (55%), Gaps = 17/293 (5%)
Query: 351 TKTSVARCATATIKRRENLNIPSKLLQRYSVGQIIGDGNFAVVRQVYDKHKDMDCALKII 410
K +A+ +K+ E+ + L ++ + +G G+F V V K A+KI+
Sbjct: 16 VKEFLAKAKEDFLKKWESPAQNTAHLDQFERIKTLGTGSFGRVMLVKHKETGNHYAMKIL 75
Query: 411 DKSKLLGKKQMIE--NEVNILRSVNHPNIIKLLDEYDTNNELYLVIELIKGGDLFDAISK 468
DK K++ KQ+ NE IL++VN P ++KL + N+ LY+V+E GG++F + +
Sbjct: 76 DKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYAPGGEMFSHLRR 135
Query: 469 NVKFSEEDSKFMTQSLASALSYLHDNYIVHRDIKPENLLVEMSGCHVKVLKVGDFGLAQR 528
+FSE ++F + YLH +++RD+KPENL+++ G +KV DFG A+R
Sbjct: 136 IGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLMIDQQG----YIKVTDFGFAKR 191
Query: 529 VLRPMFTVCGTPTYVAPEILNESGYGVKIDVWAAGVILYILLCGFPPFVSDTNDQDELFD 588
V + +CGTP Y+APEI+ GY +D WA GV++Y + G+PPF +D Q +++
Sbjct: 192 VKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQ--IYE 249
Query: 589 DILSGQYGFPSPYWDDISEEAKELISHMLESNPDLRF-----SAEDVLDHPWL 636
I+SG+ FPS + D+ K+L+ ++L+ + RF D+ +H W
Sbjct: 250 KIVSGKVRFPSHFSSDL----KDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWF 298
>pdb|3R1N|A Chain A, Mk3 Kinase Bound To Compound 5b
pdb|3SHE|A Chain A, Novel Atp-Competitive Mk2 Inhibitors With Potent
Biochemical And Cell- Based Activity Throughout The
Series
Length = 317
Score = 173 bits (439), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 95/266 (35%), Positives = 156/266 (58%), Gaps = 15/266 (5%)
Query: 383 QIIGDGNFAVVRQVYDKHKDMDCALKIIDKSKLLGKKQMIENEVNILRSVNHPNIIKLLD 442
Q++G G V + + + CALK++ S +Q +++ ++ P+I+ +LD
Sbjct: 16 QVLGLGVNGKVLECFHRRTGQKCALKLLYDSP--KARQEVDHH---WQASGGPHIVCILD 70
Query: 443 EYDTNNE----LYLVIELIKGGDLFDAISK--NVKFSEEDSKFMTQSLASALSYLHDNYI 496
Y+ + L +++E ++GG+LF I + + F+E ++ + + + +A+ +LH + I
Sbjct: 71 VYENMHHGKRCLLIIMECMEGGELFSRIQERGDQAFTEREAAEIMRDIGTAIQFLHSHNI 130
Query: 497 VHRDIKPENLLVEMSGCHVKVLKVGDFGLAQRVLR-PMFTVCGTPTYVAPEILNESGYGV 555
HRD+KPENLL S VLK+ DFG A+ + + T C TP YVAPE+L Y
Sbjct: 131 AHRDVKPENLLY-TSKEKDAVLKLTDFGFAKETTQNALQTPCYTPYYVAPEVLGPEKYDK 189
Query: 556 KIDVWAAGVILYILLCGFPPFVSDTND--QDELFDDILSGQYGFPSPYWDDISEEAKELI 613
D+W+ GVI+YILLCGFPPF S+T + I GQYGFP+P W ++SE+AK+LI
Sbjct: 190 SCDMWSLGVIMYILLCGFPPFYSNTGQAISPGMKRRIRLGQYGFPNPEWSEVSEDAKQLI 249
Query: 614 SHMLESNPDLRFSAEDVLDHPWLERS 639
+L+++P R + ++HPW+ +S
Sbjct: 250 RLLLKTDPTERLTITQFMNHPWINQS 275
>pdb|3PVB|A Chain A, Crystal Structure Of (73-244)ria:c Holoenzyme Of
Camp-Dependent Protein Kinase
Length = 345
Score = 173 bits (439), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 96/293 (32%), Positives = 163/293 (55%), Gaps = 17/293 (5%)
Query: 351 TKTSVARCATATIKRRENLNIPSKLLQRYSVGQIIGDGNFAVVRQVYDKHKDMDCALKII 410
K +A+ +K+ E + + L ++ + +G G+F V V K A+KI+
Sbjct: 10 VKEFLAKAKEDFLKKWETPSQNTAQLDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKIL 69
Query: 411 DKSKLLGKKQMIE--NEVNILRSVNHPNIIKLLDEYDTNNELYLVIELIKGGDLFDAISK 468
DK K++ KQ+ NE IL++VN P ++KL + N+ LY+V+E + GG++F + +
Sbjct: 70 DKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRR 129
Query: 469 NVKFSEEDSKFMTQSLASALSYLHDNYIVHRDIKPENLLVEMSGCHVKVLKVGDFGLAQR 528
+F E ++F + YLH +++RD+KPENLL++ G ++V DFG A+R
Sbjct: 130 IGRFXEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQG----YIQVTDFGFAKR 185
Query: 529 VLRPMFTVCGTPTYVAPEILNESGYGVKIDVWAAGVILYILLCGFPPFVSDTNDQDELFD 588
V + +CGTP Y+APEI+ GY +D WA GV++Y + G+PPF +D Q +++
Sbjct: 186 VKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQ--IYE 243
Query: 589 DILSGQYGFPSPYWDDISEEAKELISHMLESNPDLRF-----SAEDVLDHPWL 636
I+SG+ FPS + S + K+L+ ++L+ + RF D+ +H W
Sbjct: 244 KIVSGKVRFPSHF----SSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWF 292
>pdb|4DG3|E Chain E, Crystal Structure Of R336a Mutant Of Camp-dependent
Protein Kinase With Unphosphorylated Turn Motif
Length = 371
Score = 173 bits (438), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 96/293 (32%), Positives = 163/293 (55%), Gaps = 17/293 (5%)
Query: 351 TKTSVARCATATIKRRENLNIPSKLLQRYSVGQIIGDGNFAVVRQVYDKHKDMDCALKII 410
K +A+ +K+ E + + L ++ + +G G+F V V K A+KI+
Sbjct: 36 VKEFLAKAKEDFLKKWETPSQNTAQLDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKIL 95
Query: 411 DKSKLLGKKQMIE--NEVNILRSVNHPNIIKLLDEYDTNNELYLVIELIKGGDLFDAISK 468
DK K++ KQ+ NE IL++VN P ++KL + N+ LY+V+E + GG++F + +
Sbjct: 96 DKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRR 155
Query: 469 NVKFSEEDSKFMTQSLASALSYLHDNYIVHRDIKPENLLVEMSGCHVKVLKVGDFGLAQR 528
+F E ++F + YLH +++RD+KPENLL++ G ++V DFG A+R
Sbjct: 156 IGRFXEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQG----YIQVTDFGFAKR 211
Query: 529 VLRPMFTVCGTPTYVAPEILNESGYGVKIDVWAAGVILYILLCGFPPFVSDTNDQDELFD 588
V + +CGTP Y+APEI+ GY +D WA GV++Y + G+PPF +D Q +++
Sbjct: 212 VKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQ--IYE 269
Query: 589 DILSGQYGFPSPYWDDISEEAKELISHMLESNPDLRF-----SAEDVLDHPWL 636
I+SG+ FPS + D+ K+L+ ++L+ + RF D+ +H W
Sbjct: 270 KIVSGKVRFPSHFSSDL----KDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWF 318
>pdb|3QAM|E Chain E, Crystal Structure Of Glu208ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 173 bits (438), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 96/293 (32%), Positives = 163/293 (55%), Gaps = 17/293 (5%)
Query: 351 TKTSVARCATATIKRRENLNIPSKLLQRYSVGQIIGDGNFAVVRQVYDKHKDMDCALKII 410
K +A+ +K+ E + + L ++ + +G G+F V V K A+KI+
Sbjct: 15 VKEFLAKAKEDFLKKWETPSQNTAQLDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKIL 74
Query: 411 DKSKLLGKKQMIE--NEVNILRSVNHPNIIKLLDEYDTNNELYLVIELIKGGDLFDAISK 468
DK K++ KQ+ NE IL++VN P ++KL + N+ LY+V+E + GG++F + +
Sbjct: 75 DKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRR 134
Query: 469 NVKFSEEDSKFMTQSLASALSYLHDNYIVHRDIKPENLLVEMSGCHVKVLKVGDFGLAQR 528
+FSE ++F + YLH +++RD+KPENLL++ G ++V DFG A+R
Sbjct: 135 IGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQG----YIQVTDFGFAKR 190
Query: 529 VLRPMFTVCGTPTYVAPEILNESGYGVKIDVWAAGVILYILLCGFPPFVSDTNDQDELFD 588
V + +CGTP Y+AP I+ GY +D WA GV++Y + G+PPF +D Q +++
Sbjct: 191 VKGRTWXLCGTPEYLAPAIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQ--IYE 248
Query: 589 DILSGQYGFPSPYWDDISEEAKELISHMLESNPDLRF-----SAEDVLDHPWL 636
I+SG+ FPS + S + K+L+ ++L+ + RF D+ +H W
Sbjct: 249 KIVSGKVRFPSHF----SSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWF 297
>pdb|1Q61|A Chain A, Pka Triple Mutant Model Of Pkb
Length = 350
Score = 172 bits (437), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 97/293 (33%), Positives = 162/293 (55%), Gaps = 17/293 (5%)
Query: 351 TKTSVARCATATIKRRENLNIPSKLLQRYSVGQIIGDGNFAVVRQVYDKHKDMDCALKII 410
K +A+ +K+ EN + L ++ + +G G+F V V A+KI+
Sbjct: 15 VKEFLAKAKEDFLKKWENPAQNTAHLDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKIL 74
Query: 411 DKSKLLGKKQMIE--NEVNILRSVNHPNIIKLLDEYDTNNELYLVIELIKGGDLFDAISK 468
DK K++ KQ+ NE IL++VN P ++KL + N+ LY+V+E GG++F + +
Sbjct: 75 DKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYAPGGEMFSHLRR 134
Query: 469 NVKFSEEDSKFMTQSLASALSYLHDNYIVHRDIKPENLLVEMSGCHVKVLKVGDFGLAQR 528
+FSE ++F + YLH +++RD+KPENL+++ G +KV DFG A+R
Sbjct: 135 IGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLMIDQQG----YIKVTDFGFAKR 190
Query: 529 VLRPMFTVCGTPTYVAPEILNESGYGVKIDVWAAGVILYILLCGFPPFVSDTNDQDELFD 588
V + +CGTP Y+APEI+ GY +D WA GV++Y + G+PPF +D Q +++
Sbjct: 191 VKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQ--IYE 248
Query: 589 DILSGQYGFPSPYWDDISEEAKELISHMLESNPDLRF-----SAEDVLDHPWL 636
I+SG+ FPS + D+ K+L+ ++L+ + RF D+ +H W
Sbjct: 249 KIVSGKVRFPSHFSSDL----KDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWF 297
>pdb|1XH9|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 172 bits (437), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 97/293 (33%), Positives = 163/293 (55%), Gaps = 17/293 (5%)
Query: 351 TKTSVARCATATIKRRENLNIPSKLLQRYSVGQIIGDGNFAVVRQVYDKHKDMDCALKII 410
K +A+ +K+ EN + L ++ + +G G+F V V A+KI+
Sbjct: 15 VKEFLAKAKEDFLKKWENPAQNTAHLDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKIL 74
Query: 411 DKSKLLGKKQMIE--NEVNILRSVNHPNIIKLLDEYDTNNELYLVIELIKGGDLFDAISK 468
DK K++ K++ NE IL++VN P ++KL + N+ LY+V+E GG++F + +
Sbjct: 75 DKQKVVKLKEIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYAPGGEMFSHLRR 134
Query: 469 NVKFSEEDSKFMTQSLASALSYLHDNYIVHRDIKPENLLVEMSGCHVKVLKVGDFGLAQR 528
+FSE ++F + YLH +++RD+KPENL+++ G +KV DFGLA+R
Sbjct: 135 IGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLMIDQQG----YIKVTDFGLAKR 190
Query: 529 VLRPMFTVCGTPTYVAPEILNESGYGVKIDVWAAGVILYILLCGFPPFVSDTNDQDELFD 588
V + +CGTP Y+APEI+ GY +D WA GV++Y + G+PPF +D Q +++
Sbjct: 191 VKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQ--IYE 248
Query: 589 DILSGQYGFPSPYWDDISEEAKELISHMLESNPDLRF-----SAEDVLDHPWL 636
I+SG+ FPS + D+ K+L+ ++L+ + RF D+ +H W
Sbjct: 249 KIVSGKVRFPSHFSSDL----KDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWF 297
>pdb|3AMA|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Jnj- 7706621
pdb|3AMB|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Vx- 680
Length = 351
Score = 172 bits (436), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 98/303 (32%), Positives = 166/303 (54%), Gaps = 17/303 (5%)
Query: 341 ASGREVPKMPTKTSVARCATATIKRRENLNIPSKLLQRYSVGQIIGDGNFAVVRQVYDKH 400
A+ + + K +A+ +K+ E+ + L ++ + +G G+F V V K
Sbjct: 6 AAKKGXEQESVKEFLAKAKEDFLKKWESPAQNTAHLDQFERIRTLGTGSFGRVMLVKHKE 65
Query: 401 KDMDCALKIIDKSKLLGKKQMIE--NEVNILRSVNHPNIIKLLDEYDTNNELYLVIELIK 458
A+KI+DK K++ KQ+ NE I ++VN P ++KL + N+ LY+V+E
Sbjct: 66 TGNHYAMKILDKQKVVKLKQIEHTLNEKRIQQAVNFPFLVKLEFSFKDNSNLYMVLEYAP 125
Query: 459 GGDLFDAISKNVKFSEEDSKFMTQSLASALSYLHDNYIVHRDIKPENLLVEMSGCHVKVL 518
GG++F + + +FSE ++F + YLH +++RD+KPENLL++ G +
Sbjct: 126 GGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQG----YI 181
Query: 519 KVGDFGLAQRVLRPMFTVCGTPTYVAPEILNESGYGVKIDVWAAGVILYILLCGFPPFVS 578
KV DFG A+RV + +CGTP Y+APEI+ GY +D WA GV++Y + G+PPF +
Sbjct: 182 KVADFGFAKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFA 241
Query: 579 DTNDQDELFDDILSGQYGFPSPYWDDISEEAKELISHMLESNPDLRF-----SAEDVLDH 633
D Q +++ I+SG+ FPS + D+ K+L+ ++L+ + RF D+ +H
Sbjct: 242 DQPIQ--IYEKIVSGKVRFPSHFSSDL----KDLLRNLLQVDLTKRFGNLKNGVNDIKNH 295
Query: 634 PWL 636
W
Sbjct: 296 KWF 298
>pdb|4AE9|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
pdb|4AE9|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
Length = 343
Score = 172 bits (436), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 96/293 (32%), Positives = 163/293 (55%), Gaps = 17/293 (5%)
Query: 351 TKTSVARCATATIKRRENLNIPSKLLQRYSVGQIIGDGNFAVVRQVYDKHKDMDCALKII 410
K +A+ +K+ E+ + L ++ + +G G+F V V K A+KI+
Sbjct: 8 VKEFLAKAKEDFLKKWESPAQNTAHLDQFERIKTLGTGSFGRVMLVKHKETGNHYAMKIL 67
Query: 411 DKSKLLGKKQMIE--NEVNILRSVNHPNIIKLLDEYDTNNELYLVIELIKGGDLFDAISK 468
DK K++ KQ+ NE IL++VN P ++KL + N+ LY+V+E + GG++F + +
Sbjct: 68 DKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRR 127
Query: 469 NVKFSEEDSKFMTQSLASALSYLHDNYIVHRDIKPENLLVEMSGCHVKVLKVGDFGLAQR 528
+F E ++F + YLH +++RD+KPENLL++ G ++V DFG A+R
Sbjct: 128 IGRFXEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQG----YIQVTDFGFAKR 183
Query: 529 VLRPMFTVCGTPTYVAPEILNESGYGVKIDVWAAGVILYILLCGFPPFVSDTNDQDELFD 588
V + +CGTP Y+APEI+ GY +D WA GV++Y + G+PPF +D Q +++
Sbjct: 184 VKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQ--IYE 241
Query: 589 DILSGQYGFPSPYWDDISEEAKELISHMLESNPDLRF-----SAEDVLDHPWL 636
I+SG+ FPS + S + K+L+ ++L+ + RF D+ +H W
Sbjct: 242 KIVSGKVRFPSHF----SSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWF 290
>pdb|1XH7|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 172 bits (435), Expect = 6e-43, Method: Compositional matrix adjust.
Identities = 97/303 (32%), Positives = 166/303 (54%), Gaps = 17/303 (5%)
Query: 341 ASGREVPKMPTKTSVARCATATIKRRENLNIPSKLLQRYSVGQIIGDGNFAVVRQVYDKH 400
A+ + + K +A+ +K+ EN + L ++ + +G G+F V V
Sbjct: 5 AAKKGXEQESVKEFLAKAKEDFLKKWENPAQNTAHLDQFERIKTLGTGSFGRVMLVKHME 64
Query: 401 KDMDCALKIIDKSKLLGKKQMIE--NEVNILRSVNHPNIIKLLDEYDTNNELYLVIELIK 458
A+KI+DK K++ KQ+ NE IL++VN P ++KL + N+ LY+V+E +
Sbjct: 65 TGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVP 124
Query: 459 GGDLFDAISKNVKFSEEDSKFMTQSLASALSYLHDNYIVHRDIKPENLLVEMSGCHVKVL 518
GG++F + + +F E ++F + YLH +++RD+KPENLL++ G +
Sbjct: 125 GGEMFSHLRRIGRFXEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQG----YI 180
Query: 519 KVGDFGLAQRVLRPMFTVCGTPTYVAPEILNESGYGVKIDVWAAGVILYILLCGFPPFVS 578
+V DFG A+RV + +CGTP Y+APEI+ GY +D WA GV++Y + G+PPF +
Sbjct: 181 QVTDFGFAKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFA 240
Query: 579 DTNDQDELFDDILSGQYGFPSPYWDDISEEAKELISHMLESNPDLRF-----SAEDVLDH 633
D Q +++ I+SG+ FPS + S + K+L+ ++L+ + RF D+ +H
Sbjct: 241 DQPIQ--IYEKIVSGKVRFPSHF----SSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNH 294
Query: 634 PWL 636
W
Sbjct: 295 KWF 297
>pdb|2JDS|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
A- 443654
Length = 351
Score = 172 bits (435), Expect = 6e-43, Method: Compositional matrix adjust.
Identities = 96/293 (32%), Positives = 162/293 (55%), Gaps = 17/293 (5%)
Query: 351 TKTSVARCATATIKRRENLNIPSKLLQRYSVGQIIGDGNFAVVRQVYDKHKDMDCALKII 410
K +A+ +K+ EN + L ++ + +G G+F V V A+KI+
Sbjct: 16 VKEFLAKAKEDFLKKWENPAQNTAHLDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKIL 75
Query: 411 DKSKLLGKKQMIE--NEVNILRSVNHPNIIKLLDEYDTNNELYLVIELIKGGDLFDAISK 468
DK K++ KQ+ NE IL++VN P ++KL + N+ LY+V+E + GG++F + +
Sbjct: 76 DKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRR 135
Query: 469 NVKFSEEDSKFMTQSLASALSYLHDNYIVHRDIKPENLLVEMSGCHVKVLKVGDFGLAQR 528
+F E ++F + YLH +++RD+KPENLL++ G ++V DFG A+R
Sbjct: 136 IGRFXEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQG----YIQVTDFGFAKR 191
Query: 529 VLRPMFTVCGTPTYVAPEILNESGYGVKIDVWAAGVILYILLCGFPPFVSDTNDQDELFD 588
V + +CGTP Y+APEI+ GY +D WA GV++Y + G+PPF +D Q +++
Sbjct: 192 VKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQ--IYE 249
Query: 589 DILSGQYGFPSPYWDDISEEAKELISHMLESNPDLRF-----SAEDVLDHPWL 636
I+SG+ FPS + D+ K+L+ ++L+ + RF D+ +H W
Sbjct: 250 KIVSGKVRFPSHFSSDL----KDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWF 298
>pdb|4ATU|I Chain I, Human Doublecortin N-Dc Repeat Plus Linker, And Tubulin
(2xrp) Docked Into An 8a Cryo-Em Map Of
Doublecortin-Stabilised Microtubules Reconstructed In
Absence Of Kinesin
Length = 373
Score = 172 bits (435), Expect = 7e-43, Method: Compositional matrix adjust.
Identities = 100/232 (43%), Positives = 141/232 (60%), Gaps = 15/232 (6%)
Query: 98 RRAKRIRFLCNGDKFFKGVVMAVGPERYRSFDSLLEELTRALAENINLPSGVRILFTMDG 157
++AK++RF NGD++FKG+V AV +R+RSFD+LL +LTR+L++NINLP GVR ++T+DG
Sbjct: 63 KKAKKVRFYRNGDRYFKGIVYAVSSDRFRSFDALLADLTRSLSDNINLPQGVRYIYTIDG 122
Query: 158 -QKVTNIDELEDGKFYICSSSGDQFKKVDYAILNNNNSSNTLPRSGKF-------ITKSA 209
+K+ ++DELE+G+ Y+CSS + FKKV+Y N N S + S + SA
Sbjct: 123 SRKIGSMDELEEGESYVCSSD-NFFKKVEYTKNVNPNWSVNVKTSANMKAPQSLASSNSA 181
Query: 210 PPRVNKTPTSFXXXXXXXXXXXXXXXXXKVVRALLNKRNAPSLDQCFSTITDIVKLDTGA 269
R NK K VR LLNK+ A S +Q + IT+ +KL+TG
Sbjct: 182 QARENKD----FVRPKLVTIIRSGVKPRKAVRVLLNKKTAHSFEQVLTDITEAIKLETGV 237
Query: 270 VRKVYTLNGNQLARLSDFFKSDDVFFAYGSE--RVLPDDFELDVEEVKAIQA 319
V+K+YTL+G Q+ L DFF DDVF A G E R DDF LD E + ++
Sbjct: 238 VKKLYTLDGKQVTCLHDFFGDDDVFIACGPEKFRYAQDDFSLDENECRVMKG 289
>pdb|2VO0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
Length = 351
Score = 172 bits (435), Expect = 7e-43, Method: Compositional matrix adjust.
Identities = 98/303 (32%), Positives = 165/303 (54%), Gaps = 17/303 (5%)
Query: 341 ASGREVPKMPTKTSVARCATATIKRRENLNIPSKLLQRYSVGQIIGDGNFAVVRQVYDKH 400
A+ + + K +A+ +K+ EN + L ++ + +G G+F V V
Sbjct: 6 AAKKGXEQESVKEFLAKAKEDFLKKWENPAQNTAHLDQFERIKTLGTGSFGRVMLVKHME 65
Query: 401 KDMDCALKIIDKSKLLGKKQMIE--NEVNILRSVNHPNIIKLLDEYDTNNELYLVIELIK 458
A+KI+DK K++ KQ+ NE IL++VN P + KL + N+ LY+V+E
Sbjct: 66 TGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLTKLEFSFKDNSNLYMVMEYAP 125
Query: 459 GGDLFDAISKNVKFSEEDSKFMTQSLASALSYLHDNYIVHRDIKPENLLVEMSGCHVKVL 518
GG++F + + +FSE ++F + YLH +++RD+KPENL+++ G +
Sbjct: 126 GGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLMIDQQG----YI 181
Query: 519 KVGDFGLAQRVLRPMFTVCGTPTYVAPEILNESGYGVKIDVWAAGVILYILLCGFPPFVS 578
KV DFG A+RV + +CGTP Y+APEI+ GY +D WA GV++Y + G+PPF +
Sbjct: 182 KVTDFGFAKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFA 241
Query: 579 DTNDQDELFDDILSGQYGFPSPYWDDISEEAKELISHMLESNPDLRF-----SAEDVLDH 633
D Q +++ I+SG+ FPS + D+ K+L+ ++L+ + RF D+ +H
Sbjct: 242 DQPIQ--IYEKIVSGKVRFPSHFSSDL----KDLLRNLLQVDLTKRFGNLKNGVNDIKNH 295
Query: 634 PWL 636
W
Sbjct: 296 KWF 298
>pdb|1Q8W|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor Fasudil (Ha-1077)
pdb|1XH4|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|3BWJ|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Lead Compound Arc-1034
pdb|3KKV|A Chain A, Structure Of Pka With A Protein Kinase B-Selective
Inhibitor
Length = 350
Score = 172 bits (435), Expect = 8e-43, Method: Compositional matrix adjust.
Identities = 96/293 (32%), Positives = 162/293 (55%), Gaps = 17/293 (5%)
Query: 351 TKTSVARCATATIKRRENLNIPSKLLQRYSVGQIIGDGNFAVVRQVYDKHKDMDCALKII 410
K +A+ +K+ EN + L ++ + +G G+F V V A+KI+
Sbjct: 15 VKEFLAKAKEDFLKKWENPAQNTAHLDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKIL 74
Query: 411 DKSKLLGKKQMIE--NEVNILRSVNHPNIIKLLDEYDTNNELYLVIELIKGGDLFDAISK 468
DK K++ KQ+ NE IL++VN P ++KL + N+ LY+V+E + GG++F + +
Sbjct: 75 DKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRR 134
Query: 469 NVKFSEEDSKFMTQSLASALSYLHDNYIVHRDIKPENLLVEMSGCHVKVLKVGDFGLAQR 528
+F E ++F + YLH +++RD+KPENLL++ G ++V DFG A+R
Sbjct: 135 IGRFXEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQG----YIQVTDFGFAKR 190
Query: 529 VLRPMFTVCGTPTYVAPEILNESGYGVKIDVWAAGVILYILLCGFPPFVSDTNDQDELFD 588
V + +CGTP Y+APEI+ GY +D WA GV++Y + G+PPF +D Q +++
Sbjct: 191 VKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQ--IYE 248
Query: 589 DILSGQYGFPSPYWDDISEEAKELISHMLESNPDLRF-----SAEDVLDHPWL 636
I+SG+ FPS + D+ K+L+ ++L+ + RF D+ +H W
Sbjct: 249 KIVSGKVRFPSHFSSDL----KDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWF 297
>pdb|3FHI|A Chain A, Crystal Structure Of A Complex Between The Catalytic And
Regulatory (Ri{alpha}) Subunits Of Pka
Length = 350
Score = 171 bits (434), Expect = 8e-43, Method: Compositional matrix adjust.
Identities = 96/293 (32%), Positives = 163/293 (55%), Gaps = 17/293 (5%)
Query: 351 TKTSVARCATATIKRRENLNIPSKLLQRYSVGQIIGDGNFAVVRQVYDKHKDMDCALKII 410
K +A+ +K+ E + + L ++ + +G G+F V V K A+KI+
Sbjct: 15 VKEFLAKAKEDFLKKWETPSQNTAQLDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKIL 74
Query: 411 DKSKLLGKKQMIE--NEVNILRSVNHPNIIKLLDEYDTNNELYLVIELIKGGDLFDAISK 468
DK K++ KQ+ NE IL++VN P ++KL + N+ LY+V+E + GG++F + +
Sbjct: 75 DKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRR 134
Query: 469 NVKFSEEDSKFMTQSLASALSYLHDNYIVHRDIKPENLLVEMSGCHVKVLKVGDFGLAQR 528
+FSE ++F + YLH +++RD+KPENLL++ G ++V DFG A+R
Sbjct: 135 IGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGY----IQVTDFGFAKR 190
Query: 529 VLRPMFTVCGTPTYVAPEILNESGYGVKIDVWAAGVILYILLCGFPPFVSDTNDQDELFD 588
V + + GTP Y+APEI+ GY +D WA GV++Y + G+PPF +D Q +++
Sbjct: 191 VKGRTWXLAGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQ--IYE 248
Query: 589 DILSGQYGFPSPYWDDISEEAKELISHMLESNPDLRF-----SAEDVLDHPWL 636
I+SG+ FPS + D+ K+L+ ++L+ + RF D+ +H W
Sbjct: 249 KIVSGKVRFPSHFSSDL----KDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWF 297
>pdb|2JDT|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDV|A Chain A, Structure Of Pka-Pkb Chimera Complexed With A-443654
pdb|2UVX|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 7-Azaindole
pdb|2UW4|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
2-(4-(5-Methyl- 1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW7|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|4AXA|A Chain A, Structure Of Pka-pkb Chimera Complexed With
(1s)-2-amino-1-(
4-chlorophenyl)-1-(4-(1h-pyrazol-4-yl)phenyl)ethan-1-ol
Length = 351
Score = 171 bits (434), Expect = 8e-43, Method: Compositional matrix adjust.
Identities = 97/293 (33%), Positives = 161/293 (54%), Gaps = 17/293 (5%)
Query: 351 TKTSVARCATATIKRRENLNIPSKLLQRYSVGQIIGDGNFAVVRQVYDKHKDMDCALKII 410
K +A+ +K+ EN + L ++ + +G G+F V V A+KI+
Sbjct: 16 VKEFLAKAKEDFLKKWENPAQNTAHLDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKIL 75
Query: 411 DKSKLLGKKQMIE--NEVNILRSVNHPNIIKLLDEYDTNNELYLVIELIKGGDLFDAISK 468
DK K++ KQ+ NE IL++VN P + KL + N+ LY+V+E GG++F + +
Sbjct: 76 DKQKVVKLKQIEHTLNEKRILQAVNFPFLTKLEFSFKDNSNLYMVMEYAPGGEMFSHLRR 135
Query: 469 NVKFSEEDSKFMTQSLASALSYLHDNYIVHRDIKPENLLVEMSGCHVKVLKVGDFGLAQR 528
+FSE ++F + YLH +++RD+KPENL+++ G +KV DFG A+R
Sbjct: 136 IGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLMIDQQG----YIKVTDFGFAKR 191
Query: 529 VLRPMFTVCGTPTYVAPEILNESGYGVKIDVWAAGVILYILLCGFPPFVSDTNDQDELFD 588
V + +CGTP Y+APEI+ GY +D WA GV++Y + G+PPF +D Q +++
Sbjct: 192 VKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQ--IYE 249
Query: 589 DILSGQYGFPSPYWDDISEEAKELISHMLESNPDLRF-----SAEDVLDHPWL 636
I+SG+ FPS + D+ K+L+ ++L+ + RF D+ +H W
Sbjct: 250 KIVSGKVRFPSHFSSDL----KDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWF 298
>pdb|1RDQ|E Chain E, Hydrolysis Of Atp In The Crystal Of Y204a Mutant Of
Camp-Dependent Protein Kinase
Length = 350
Score = 171 bits (434), Expect = 8e-43, Method: Compositional matrix adjust.
Identities = 96/293 (32%), Positives = 163/293 (55%), Gaps = 17/293 (5%)
Query: 351 TKTSVARCATATIKRRENLNIPSKLLQRYSVGQIIGDGNFAVVRQVYDKHKDMDCALKII 410
K +A+ +K+ E + + L ++ + +G G+F V V K A+KI+
Sbjct: 15 VKEFLAKAKEDFLKKWETPSQNTAQLDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKIL 74
Query: 411 DKSKLLGKKQMIE--NEVNILRSVNHPNIIKLLDEYDTNNELYLVIELIKGGDLFDAISK 468
DK K++ KQ+ NE IL++VN P ++KL + N+ LY+V+E + GG++F + +
Sbjct: 75 DKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRR 134
Query: 469 NVKFSEEDSKFMTQSLASALSYLHDNYIVHRDIKPENLLVEMSGCHVKVLKVGDFGLAQR 528
+FSE ++F + YLH +++RD+KPENLL++ G ++V DFG A+R
Sbjct: 135 IGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQG----YIQVTDFGFAKR 190
Query: 529 VLRPMFTVCGTPTYVAPEILNESGYGVKIDVWAAGVILYILLCGFPPFVSDTNDQDELFD 588
V + +CGTP +APEI+ GY +D WA GV++Y + G+PPF +D Q +++
Sbjct: 191 VKGRTWXLCGTPEALAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQ--IYE 248
Query: 589 DILSGQYGFPSPYWDDISEEAKELISHMLESNPDLRF-----SAEDVLDHPWL 636
I+SG+ FPS + D+ K+L+ ++L+ + RF D+ +H W
Sbjct: 249 KIVSGKVRFPSHFSSDL----KDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWF 297
>pdb|1Q24|A Chain A, Pka Double Mutant Model Of Pkb In Complex With Mgatp
pdb|1Q62|A Chain A, Pka Double Mutant Model Of Pkb
Length = 350
Score = 171 bits (434), Expect = 8e-43, Method: Compositional matrix adjust.
Identities = 96/293 (32%), Positives = 162/293 (55%), Gaps = 17/293 (5%)
Query: 351 TKTSVARCATATIKRRENLNIPSKLLQRYSVGQIIGDGNFAVVRQVYDKHKDMDCALKII 410
K +A+ +K+ EN + L ++ + +G G+F V V A+KI+
Sbjct: 15 VKEFLAKAKEDFLKKWENPAQNTAHLDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKIL 74
Query: 411 DKSKLLGKKQMIE--NEVNILRSVNHPNIIKLLDEYDTNNELYLVIELIKGGDLFDAISK 468
DK K++ KQ+ NE IL++VN P ++KL + N+ LY+V+E GG++F + +
Sbjct: 75 DKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYAPGGEMFSHLRR 134
Query: 469 NVKFSEEDSKFMTQSLASALSYLHDNYIVHRDIKPENLLVEMSGCHVKVLKVGDFGLAQR 528
+FSE ++F + YLH +++RD+KPENL+++ G ++V DFG A+R
Sbjct: 135 IGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLMIDQQG----YIQVTDFGFAKR 190
Query: 529 VLRPMFTVCGTPTYVAPEILNESGYGVKIDVWAAGVILYILLCGFPPFVSDTNDQDELFD 588
V + +CGTP Y+APEI+ GY +D WA GV++Y + G+PPF +D Q +++
Sbjct: 191 VKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQ--IYE 248
Query: 589 DILSGQYGFPSPYWDDISEEAKELISHMLESNPDLRF-----SAEDVLDHPWL 636
I+SG+ FPS + D+ K+L+ ++L+ + RF D+ +H W
Sbjct: 249 KIVSGKVRFPSHFSSDL----KDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWF 297
>pdb|1SMH|A Chain A, Protein Kinase A Variant Complex With Completely Ordered
N- Terminal Helix
pdb|1XHA|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 171 bits (433), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 96/293 (32%), Positives = 163/293 (55%), Gaps = 17/293 (5%)
Query: 351 TKTSVARCATATIKRRENLNIPSKLLQRYSVGQIIGDGNFAVVRQVYDKHKDMDCALKII 410
K +A+ +K+ EN + L ++ + +G G+F V V A+KI+
Sbjct: 15 VKEFLAKAKEDFLKKWENPAQNTAHLDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKIL 74
Query: 411 DKSKLLGKKQMIE--NEVNILRSVNHPNIIKLLDEYDTNNELYLVIELIKGGDLFDAISK 468
DK K++ K++ NE IL++VN P ++KL + N+ LY+V+E GG++F + +
Sbjct: 75 DKQKVVKLKEIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYAPGGEMFSHLRR 134
Query: 469 NVKFSEEDSKFMTQSLASALSYLHDNYIVHRDIKPENLLVEMSGCHVKVLKVGDFGLAQR 528
+FSE ++F + YLH +++RD+KPENL+++ G ++V DFGLA+R
Sbjct: 135 IGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLMIDQQG----YIQVTDFGLAKR 190
Query: 529 VLRPMFTVCGTPTYVAPEILNESGYGVKIDVWAAGVILYILLCGFPPFVSDTNDQDELFD 588
V + +CGTP Y+APEI+ GY +D WA GV++Y + G+PPF +D Q +++
Sbjct: 191 VKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQ--IYE 248
Query: 589 DILSGQYGFPSPYWDDISEEAKELISHMLESNPDLRF-----SAEDVLDHPWL 636
I+SG+ FPS + D+ K+L+ ++L+ + RF D+ +H W
Sbjct: 249 KIVSGKVRFPSHFSSDL----KDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWF 297
>pdb|1J3H|A Chain A, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
pdb|1J3H|B Chain B, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
Length = 350
Score = 171 bits (433), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 96/293 (32%), Positives = 163/293 (55%), Gaps = 17/293 (5%)
Query: 351 TKTSVARCATATIKRRENLNIPSKLLQRYSVGQIIGDGNFAVVRQVYDKHKDMDCALKII 410
K +A+ +K+ E + + L ++ + +G G+F V V K A+KI+
Sbjct: 15 VKEFLAKAKEDFLKKWETPSQNTAQLDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKIL 74
Query: 411 DKSKLLGKKQMIE--NEVNILRSVNHPNIIKLLDEYDTNNELYLVIELIKGGDLFDAISK 468
DK K++ KQ+ NE IL++VN P ++KL + N+ LY+V+E + GG++F + +
Sbjct: 75 DKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRR 134
Query: 469 NVKFSEEDSKFMTQSLASALSYLHDNYIVHRDIKPENLLVEMSGCHVKVLKVGDFGLAQR 528
+FSE ++F + YLH +++RD+KPENLL++ G ++V DFG A+R
Sbjct: 135 IGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGY----IQVTDFGFAKR 190
Query: 529 VLRPMFTVCGTPTYVAPEILNESGYGVKIDVWAAGVILYILLCGFPPFVSDTNDQDELFD 588
V + + GTP Y+APEI+ GY +D WA GV++Y + G+PPF +D Q +++
Sbjct: 191 VKGRTWXLXGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQ--IYE 248
Query: 589 DILSGQYGFPSPYWDDISEEAKELISHMLESNPDLRF-----SAEDVLDHPWL 636
I+SG+ FPS + S + K+L+ ++L+ + RF D+ +H W
Sbjct: 249 KIVSGKVRFPSHF----SSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWF 297
>pdb|1SZM|A Chain A, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
pdb|1SZM|B Chain B, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
Length = 350
Score = 171 bits (433), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 96/293 (32%), Positives = 161/293 (54%), Gaps = 17/293 (5%)
Query: 351 TKTSVARCATATIKRRENLNIPSKLLQRYSVGQIIGDGNFAVVRQVYDKHKDMDCALKII 410
K +A+ +K+ EN + L ++ + +G G+F V V A+KI+
Sbjct: 15 VKEFLAKAKEDFLKKWENPAQNTAHLDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKIL 74
Query: 411 DKSKLLGKKQMIE--NEVNILRSVNHPNIIKLLDEYDTNNELYLVIELIKGGDLFDAISK 468
DK K++ KQ+ NE IL++VN P ++KL + N+ LY+V+E GG++F + +
Sbjct: 75 DKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYAPGGEMFSHLRR 134
Query: 469 NVKFSEEDSKFMTQSLASALSYLHDNYIVHRDIKPENLLVEMSGCHVKVLKVGDFGLAQR 528
+F E ++F + YLH +++RD+KPENL+++ G +KV DFG A+R
Sbjct: 135 IGRFXEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLMIDQQG----YIKVTDFGFAKR 190
Query: 529 VLRPMFTVCGTPTYVAPEILNESGYGVKIDVWAAGVILYILLCGFPPFVSDTNDQDELFD 588
V + +CGTP Y+APEI+ GY +D WA GV++Y + G+PPF +D Q +++
Sbjct: 191 VKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQ--IYE 248
Query: 589 DILSGQYGFPSPYWDDISEEAKELISHMLESNPDLRF-----SAEDVLDHPWL 636
I+SG+ FPS + D+ K+L+ ++L+ + RF D+ +H W
Sbjct: 249 KIVSGKVRFPSHFSSDL----KDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWF 297
>pdb|2UVY|A Chain A, Structure Of Pka-pkb Chimera Complexed With Methyl-(4-(9h-
Purin-6-yl)-benzyl)-amine
pdb|2UVZ|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
C-Phenyl-C-(4-( 9h-Purin-6-Yl)-Phenyl)-Methylamine
pdb|2UW0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 6-(4-(4-(4-
Chloro-Phenyl)-Piperidin-4-Yl)-Phenyl)-9h-Purine
pdb|2UW3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 5-Methyl-4-
Phenyl-1h-Pyrazole
pdb|2UW5|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (R)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (S)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW8|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 2-(4-Chloro-
Phenyl)-2-Phenyl-Ethylamine
pdb|2VNW|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)methanamine
pdb|2VNY|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)amine
pdb|2VO3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
pdb|2VO6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-
Chlorobenzyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Ylamine
Length = 351
Score = 170 bits (430), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 96/293 (32%), Positives = 160/293 (54%), Gaps = 17/293 (5%)
Query: 351 TKTSVARCATATIKRRENLNIPSKLLQRYSVGQIIGDGNFAVVRQVYDKHKDMDCALKII 410
K +A+ +K+ EN + L ++ + +G G+F V V A+KI+
Sbjct: 16 VKEFLAKAKEDFLKKWENPAQNTAHLDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKIL 75
Query: 411 DKSKLLGKKQMIE--NEVNILRSVNHPNIIKLLDEYDTNNELYLVIELIKGGDLFDAISK 468
DK K++ KQ+ NE IL++VN P + KL + N+ LY+V+E GG++F + +
Sbjct: 76 DKQKVVKLKQIEHTLNEKRILQAVNFPFLTKLEFSFKDNSNLYMVMEYAPGGEMFSHLRR 135
Query: 469 NVKFSEEDSKFMTQSLASALSYLHDNYIVHRDIKPENLLVEMSGCHVKVLKVGDFGLAQR 528
+F E ++F + YLH +++RD+KPENL+++ G +KV DFG A+R
Sbjct: 136 IGRFXEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLMIDQQG----YIKVTDFGFAKR 191
Query: 529 VLRPMFTVCGTPTYVAPEILNESGYGVKIDVWAAGVILYILLCGFPPFVSDTNDQDELFD 588
V + +CGTP Y+APEI+ GY +D WA GV++Y + G+PPF +D Q +++
Sbjct: 192 VKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQ--IYE 249
Query: 589 DILSGQYGFPSPYWDDISEEAKELISHMLESNPDLRF-----SAEDVLDHPWL 636
I+SG+ FPS + D+ K+L+ ++L+ + RF D+ +H W
Sbjct: 250 KIVSGKVRFPSHFSSDL----KDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWF 298
>pdb|3TAC|A Chain A, Crystal Structure Of The Liprin-AlphaCASK COMPLEX
Length = 361
Score = 169 bits (427), Expect = 6e-42, Method: Compositional matrix adjust.
Identities = 93/270 (34%), Positives = 148/270 (54%), Gaps = 15/270 (5%)
Query: 379 YSVGQIIGDGNFAVVRQVYDKHKDMDCALKIIDKSKLLGKKQM----IENEVNILRSVNH 434
Y + ++IG G F+VVR+ ++ A+KI+D +K + ++ E +I + H
Sbjct: 28 YELCEVIGKGPFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASICHMLKH 87
Query: 435 PNIIKLLDEYDTNNELYLVIELIKGGDLFDAISKNVK----FSEEDSKFMTQSLASALSY 490
P+I++LL+ Y ++ LY+V E + G DL I K +SE + + + AL Y
Sbjct: 88 PHIVELLETYSSDGMLYMVFEFMDGADLCFEIVKRADAGFVYSEAVASHYMRQILEALRY 147
Query: 491 LHDNYIVHRDIKPENLLVEMSGCHVKVLKVGDFGLAQRVLRPMFTV---CGTPTYVAPEI 547
HDN I+HRD+KP +L+ S + +K+G FG+A ++ GTP ++APE+
Sbjct: 148 CHDNNIIHRDVKPHCVLL-ASKENSAPVKLGGFGVAIQLGESGLVAGGRVGTPHFMAPEV 206
Query: 548 LNESGYGVKIDVWAAGVILYILLCGFPPFVSDTNDQDELFDDILSGQYGFPSPYWDDISE 607
+ YG +DVW GVIL+ILL G PF ++ LF+ I+ G+Y W ISE
Sbjct: 207 VKREPYGKPVDVWGCGVILFILLSGCLPFY---GTKERLFEGIIKGKYKMNPRQWSHISE 263
Query: 608 EAKELISHMLESNPDLRFSAEDVLDHPWLE 637
AK+L+ ML +P R + + L+HPWL+
Sbjct: 264 SAKDLVRRMLMLDPAERITVYEALNHPWLK 293
>pdb|2X4F|A Chain A, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156.
pdb|2X4F|B Chain B, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156
Length = 373
Score = 168 bits (425), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 93/257 (36%), Positives = 151/257 (58%), Gaps = 8/257 (3%)
Query: 383 QIIGDGNFAVVRQVYDKHKDMDCALKIIDKSKLLGKKQMIENEVNILRSVNHPNIIKLLD 442
+I+G G F V + + + A KII K++ + K+ ++NE++++ ++H N+I+L D
Sbjct: 95 EILGGGRFGQVHKCEETATGLKLAAKII-KTRGMKDKEEVKNEISVMNQLDHANLIQLYD 153
Query: 443 EYDTNNELYLVIELIKGGDLFD-AISKNVKFSEEDSKFMTQSLASALSYLHDNYIVHRDI 501
+++ N++ LV+E + GG+LFD I ++ +E D+ + + + ++H YI+H D+
Sbjct: 154 AFESKNDIVLVMEYVDGGELFDRIIDESYNLTELDTILFMKQICEGIRHMHQMYILHLDL 213
Query: 502 KPENLLVEMSGCHVKVLKVGDFGLAQRVL-RPMFTV-CGTPTYVAPEILNESGYGVKIDV 559
KPEN+L K +K+ DFGLA+R R V GTP ++APE++N D+
Sbjct: 214 KPENILC--VNRDAKQIKIIDFGLARRYKPREKLKVNFGTPEFLAPEVVNYDFVSFPTDM 271
Query: 560 WAAGVILYILLCGFPPFVSDTNDQDELFDDILSGQYGFPSPYWDDISEEAKELISHMLES 619
W+ GVI Y+LL G PF+ D ND E ++IL+ ++ + DISEEAKE IS +L
Sbjct: 272 WSVGVIAYMLLSGLSPFLGD-NDA-ETLNNILACRWDLEDEEFQDISEEAKEFISKLLIK 329
Query: 620 NPDLRFSAEDVLDHPWL 636
R SA + L HPWL
Sbjct: 330 EKSWRISASEALKHPWL 346
>pdb|3C0G|A Chain A, Cask Cam-kinase Domain- 3'-amp Complex, P1 Form
pdb|3C0G|B Chain B, Cask Cam-kinase Domain- 3'-amp Complex, P1 Form
pdb|3C0H|A Chain A, Cask Cam-Kinase Domain- Amppnp Complex, P1 Form
pdb|3C0H|B Chain B, Cask Cam-Kinase Domain- Amppnp Complex, P1 Form
pdb|3C0I|A Chain A, Cask Cam-Kinase Domain- 3'-Amp Complex, P212121 Form
Length = 351
Score = 167 bits (424), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 93/270 (34%), Positives = 148/270 (54%), Gaps = 15/270 (5%)
Query: 379 YSVGQIIGDGNFAVVRQVYDKHKDMDCALKIIDKSKLLGKKQM----IENEVNILRSVNH 434
Y + ++IG G F+VVR+ ++ A+KI+D +K + ++ E +I + H
Sbjct: 26 YELCEVIGKGPFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASICHMLKH 85
Query: 435 PNIIKLLDEYDTNNELYLVIELIKGGDLFDAISKNVK----FSEEDSKFMTQSLASALSY 490
P+I++LL+ Y ++ LY+V E + G DL I K +SE + + + AL Y
Sbjct: 86 PHIVELLETYSSDGMLYMVFEFMDGADLCFEIVKRADAGFVYSEAVASHYMRQILEALRY 145
Query: 491 LHDNYIVHRDIKPENLLVEMSGCHVKVLKVGDFGLAQRVLRPMFTV---CGTPTYVAPEI 547
HDN I+HRD+KP +L+ S + +K+G FG+A ++ GTP ++APE+
Sbjct: 146 CHDNNIIHRDVKPHCVLL-ASKENSAPVKLGGFGVAIQLGESGLVAGGRVGTPHFMAPEV 204
Query: 548 LNESGYGVKIDVWAAGVILYILLCGFPPFVSDTNDQDELFDDILSGQYGFPSPYWDDISE 607
+ YG +DVW GVIL+ILL G PF ++ LF+ I+ G+Y W ISE
Sbjct: 205 VKREPYGKPVDVWGCGVILFILLSGCLPFY---GTKERLFEGIIKGKYKMNPRQWSHISE 261
Query: 608 EAKELISHMLESNPDLRFSAEDVLDHPWLE 637
AK+L+ ML +P R + + L+HPWL+
Sbjct: 262 SAKDLVRRMLMLDPAERITVYEALNHPWLK 291
>pdb|2JBO|A Chain A, Protein Kinase Mk2 In Complex With An Inhibitor (Crystal
Form-1, Soaking)
pdb|2JBP|A Chain A, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|B Chain B, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|C Chain C, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|D Chain D, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|E Chain E, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|F Chain F, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|G Chain G, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|H Chain H, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|I Chain I, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|J Chain J, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|K Chain K, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|L Chain L, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
Length = 326
Score = 166 bits (419), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 95/267 (35%), Positives = 149/267 (55%), Gaps = 16/267 (5%)
Query: 383 QIIGDGNFAVVRQVYDKHKDMDCALKIIDKSKLLGKKQMIENEVNILRSVNHPNIIKLLD 442
Q++G G V Q+++K ALK++ K E E++ R+ P+I++++D
Sbjct: 30 QVLGLGINGKVLQIFNKRTQEKFALKMLQDCP----KARREVELH-WRASQCPHIVRIVD 84
Query: 443 EYDT----NNELYLVIELIKGGDLFDAIS--KNVKFSEEDSKFMTQSLASALSYLHDNYI 496
Y+ L +V+E + GG+LF I + F+E ++ + +S+ A+ YLH I
Sbjct: 85 VYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINI 144
Query: 497 VHRDIKPENLLVEMSGCHVKVLKVGDFGLAQRVL--RPMFTVCGTPTYVAPEILNESGYG 554
HRD+KPENLL + +LK+ DFG A+ + T C TP YVAPE+L Y
Sbjct: 145 AHRDVKPENLLYTSKRPNA-ILKLTDFGFAKETTSHNSLTTPCYTPYYVAPEVLGPEKYD 203
Query: 555 VKIDVWAAGVILYILLCGFPPFVSDTN--DQDELFDDILSGQYGFPSPYWDDISEEAKEL 612
D+W+ GVI+YILLCG+PPF S+ + I GQY FP+P W ++SEE K L
Sbjct: 204 KSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQYEFPNPEWSEVSEEVKML 263
Query: 613 ISHMLESNPDLRFSAEDVLDHPWLERS 639
I ++L++ P R + + ++HPW+ +S
Sbjct: 264 IRNLLKTEPTQRMTITEFMNHPWIMQS 290
>pdb|2ONL|C Chain C, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|D Chain D, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
Length = 406
Score = 165 bits (418), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 95/267 (35%), Positives = 149/267 (55%), Gaps = 16/267 (5%)
Query: 383 QIIGDGNFAVVRQVYDKHKDMDCALKIIDKSKLLGKKQMIENEVNILRSVNHPNIIKLLD 442
Q++G G V Q+++K ALK++ K E E++ R+ P+I++++D
Sbjct: 74 QVLGLGINGKVLQIFNKRTQEKFALKMLQDCP----KARREVELH-WRASQCPHIVRIVD 128
Query: 443 EYDT----NNELYLVIELIKGGDLFDAIS--KNVKFSEEDSKFMTQSLASALSYLHDNYI 496
Y+ L +V+E + GG+LF I + F+E ++ + +S+ A+ YLH I
Sbjct: 129 VYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINI 188
Query: 497 VHRDIKPENLLVEMSGCHVKVLKVGDFGLAQRVL--RPMFTVCGTPTYVAPEILNESGYG 554
HRD+KPENLL + +LK+ DFG A+ + T C TP YVAPE+L Y
Sbjct: 189 AHRDVKPENLLYTSKRPNA-ILKLTDFGFAKETTSHNSLTTPCYTPYYVAPEVLGPEKYD 247
Query: 555 VKIDVWAAGVILYILLCGFPPFVSDTN--DQDELFDDILSGQYGFPSPYWDDISEEAKEL 612
D+W+ GVI+YILLCG+PPF S+ + I GQY FP+P W ++SEE K L
Sbjct: 248 KSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQYEFPNPEWSEVSEEVKML 307
Query: 613 ISHMLESNPDLRFSAEDVLDHPWLERS 639
I ++L++ P R + + ++HPW+ +S
Sbjct: 308 IRNLLKTEPTQRMTITEFMNHPWIMQS 334
>pdb|1KWP|A Chain A, Crystal Structure Of Mapkap2
pdb|1KWP|B Chain B, Crystal Structure Of Mapkap2
pdb|1NY3|A Chain A, Crystal Structure Of Adp Bound To Map Kap Kinase 2
Length = 400
Score = 165 bits (418), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 95/267 (35%), Positives = 149/267 (55%), Gaps = 16/267 (5%)
Query: 383 QIIGDGNFAVVRQVYDKHKDMDCALKIIDKSKLLGKKQMIENEVNILRSVNHPNIIKLLD 442
Q++G G V Q+++K ALK++ K E E++ R+ P+I++++D
Sbjct: 68 QVLGLGINGKVLQIFNKRTQEKFALKMLQDCP----KARREVELH-WRASQCPHIVRIVD 122
Query: 443 EYDT----NNELYLVIELIKGGDLFDAIS--KNVKFSEEDSKFMTQSLASALSYLHDNYI 496
Y+ L +V+E + GG+LF I + F+E ++ + +S+ A+ YLH I
Sbjct: 123 VYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINI 182
Query: 497 VHRDIKPENLLVEMSGCHVKVLKVGDFGLAQRVL--RPMFTVCGTPTYVAPEILNESGYG 554
HRD+KPENLL + +LK+ DFG A+ + T C TP YVAPE+L Y
Sbjct: 183 AHRDVKPENLLYTSKRPNA-ILKLTDFGFAKETTSHNSLTTPCYTPYYVAPEVLGPEKYD 241
Query: 555 VKIDVWAAGVILYILLCGFPPFVSDTN--DQDELFDDILSGQYGFPSPYWDDISEEAKEL 612
D+W+ GVI+YILLCG+PPF S+ + I GQY FP+P W ++SEE K L
Sbjct: 242 KSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQYEFPNPEWSEVSEEVKML 301
Query: 613 ISHMLESNPDLRFSAEDVLDHPWLERS 639
I ++L++ P R + + ++HPW+ +S
Sbjct: 302 IRNLLKTEPTQRMTITEFMNHPWIMQS 328
>pdb|3GOK|A Chain A, Binding Site Mapping Of Protein Ligands
pdb|3GOK|B Chain B, Binding Site Mapping Of Protein Ligands
pdb|3GOK|C Chain C, Binding Site Mapping Of Protein Ligands
pdb|3GOK|D Chain D, Binding Site Mapping Of Protein Ligands
pdb|3GOK|E Chain E, Binding Site Mapping Of Protein Ligands
pdb|3GOK|F Chain F, Binding Site Mapping Of Protein Ligands
pdb|3GOK|G Chain G, Binding Site Mapping Of Protein Ligands
pdb|3GOK|H Chain H, Binding Site Mapping Of Protein Ligands
pdb|3GOK|I Chain I, Binding Site Mapping Of Protein Ligands
pdb|3GOK|J Chain J, Binding Site Mapping Of Protein Ligands
pdb|3GOK|K Chain K, Binding Site Mapping Of Protein Ligands
pdb|3GOK|L Chain L, Binding Site Mapping Of Protein Ligands
Length = 334
Score = 165 bits (418), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 95/267 (35%), Positives = 149/267 (55%), Gaps = 16/267 (5%)
Query: 383 QIIGDGNFAVVRQVYDKHKDMDCALKIIDKSKLLGKKQMIENEVNILRSVNHPNIIKLLD 442
Q++G G V Q+++K ALK++ K E E++ R+ P+I++++D
Sbjct: 38 QVLGLGINGKVLQIFNKRTQEKFALKMLQDCP----KARREVELH-WRASQCPHIVRIVD 92
Query: 443 EYDT----NNELYLVIELIKGGDLFDAIS--KNVKFSEEDSKFMTQSLASALSYLHDNYI 496
Y+ L +V+E + GG+LF I + F+E ++ + +S+ A+ YLH I
Sbjct: 93 VYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINI 152
Query: 497 VHRDIKPENLLVEMSGCHVKVLKVGDFGLAQRVL--RPMFTVCGTPTYVAPEILNESGYG 554
HRD+KPENLL + +LK+ DFG A+ + T C TP YVAPE+L Y
Sbjct: 153 AHRDVKPENLLYTSKRPNA-ILKLTDFGFAKETTSHNSLTTPCYTPYYVAPEVLGPEKYD 211
Query: 555 VKIDVWAAGVILYILLCGFPPFVSDTN--DQDELFDDILSGQYGFPSPYWDDISEEAKEL 612
D+W+ GVI+YILLCG+PPF S+ + I GQY FP+P W ++SEE K L
Sbjct: 212 KSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQYEFPNPEWSEVSEEVKML 271
Query: 613 ISHMLESNPDLRFSAEDVLDHPWLERS 639
I ++L++ P R + + ++HPW+ +S
Sbjct: 272 IRNLLKTEPTQRMTITEFMNHPWIMQS 298
>pdb|3FPM|A Chain A, Crystal Structure Of A Squarate Inhibitor Bound To Mapkap
Kinase-2
Length = 325
Score = 165 bits (418), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 95/267 (35%), Positives = 149/267 (55%), Gaps = 16/267 (5%)
Query: 383 QIIGDGNFAVVRQVYDKHKDMDCALKIIDKSKLLGKKQMIENEVNILRSVNHPNIIKLLD 442
Q++G G V Q+++K ALK++ K E E++ R+ P+I++++D
Sbjct: 29 QVLGLGINGKVLQIFNKRTQEKFALKMLQDCP----KARREVELH-WRASQCPHIVRIVD 83
Query: 443 EYDT----NNELYLVIELIKGGDLFDAIS--KNVKFSEEDSKFMTQSLASALSYLHDNYI 496
Y+ L +V+E + GG+LF I + F+E ++ + +S+ A+ YLH I
Sbjct: 84 VYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINI 143
Query: 497 VHRDIKPENLLVEMSGCHVKVLKVGDFGLAQRVL--RPMFTVCGTPTYVAPEILNESGYG 554
HRD+KPENLL + +LK+ DFG A+ + T C TP YVAPE+L Y
Sbjct: 144 AHRDVKPENLLYTSKRPNA-ILKLTDFGFAKETTSHNSLTTPCYTPYYVAPEVLGPEKYD 202
Query: 555 VKIDVWAAGVILYILLCGFPPFVSDTN--DQDELFDDILSGQYGFPSPYWDDISEEAKEL 612
D+W+ GVI+YILLCG+PPF S+ + I GQY FP+P W ++SEE K L
Sbjct: 203 KSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQYEFPNPEWSEVSEEVKML 262
Query: 613 ISHMLESNPDLRFSAEDVLDHPWLERS 639
I ++L++ P R + + ++HPW+ +S
Sbjct: 263 IRNLLKTEPTQRMTITEFMNHPWIMQS 289
>pdb|2PZY|A Chain A, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|B Chain B, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|C Chain C, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|D Chain D, Structure Of Mk2 Complexed With Compound 76
pdb|3KC3|A Chain A, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|B Chain B, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|C Chain C, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|D Chain D, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|E Chain E, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|F Chain F, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|G Chain G, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|H Chain H, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|I Chain I, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|J Chain J, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|K Chain K, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|L Chain L, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3A2C|A Chain A, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|B Chain B, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|C Chain C, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|D Chain D, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|E Chain E, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|F Chain F, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|G Chain G, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|H Chain H, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|I Chain I, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|J Chain J, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|K Chain K, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|L Chain L, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
Length = 324
Score = 165 bits (418), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 95/267 (35%), Positives = 149/267 (55%), Gaps = 16/267 (5%)
Query: 383 QIIGDGNFAVVRQVYDKHKDMDCALKIIDKSKLLGKKQMIENEVNILRSVNHPNIIKLLD 442
Q++G G V Q+++K ALK++ K E E++ R+ P+I++++D
Sbjct: 28 QVLGLGINGKVLQIFNKRTQEKFALKMLQDCP----KARREVELH-WRASQCPHIVRIVD 82
Query: 443 EYDT----NNELYLVIELIKGGDLFDAIS--KNVKFSEEDSKFMTQSLASALSYLHDNYI 496
Y+ L +V+E + GG+LF I + F+E ++ + +S+ A+ YLH I
Sbjct: 83 VYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINI 142
Query: 497 VHRDIKPENLLVEMSGCHVKVLKVGDFGLAQRVL--RPMFTVCGTPTYVAPEILNESGYG 554
HRD+KPENLL + +LK+ DFG A+ + T C TP YVAPE+L Y
Sbjct: 143 AHRDVKPENLLYTSKRPNA-ILKLTDFGFAKETTSHNSLTTPCYTPYYVAPEVLGPEKYD 201
Query: 555 VKIDVWAAGVILYILLCGFPPFVSDTN--DQDELFDDILSGQYGFPSPYWDDISEEAKEL 612
D+W+ GVI+YILLCG+PPF S+ + I GQY FP+P W ++SEE K L
Sbjct: 202 KSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQYEFPNPEWSEVSEEVKML 261
Query: 613 ISHMLESNPDLRFSAEDVLDHPWLERS 639
I ++L++ P R + + ++HPW+ +S
Sbjct: 262 IRNLLKTEPTQRMTITEFMNHPWIMQS 288
>pdb|2OZA|A Chain A, Structure Of P38alpha Complex
Length = 356
Score = 165 bits (418), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 95/267 (35%), Positives = 149/267 (55%), Gaps = 16/267 (5%)
Query: 383 QIIGDGNFAVVRQVYDKHKDMDCALKIIDKSKLLGKKQMIENEVNILRSVNHPNIIKLLD 442
Q++G G V Q+++K ALK++ K E E++ R+ P+I++++D
Sbjct: 24 QVLGLGINGKVLQIFNKRTQEKFALKMLQDCP----KARREVELH-WRASQCPHIVRIVD 78
Query: 443 EYDT----NNELYLVIELIKGGDLFDAIS--KNVKFSEEDSKFMTQSLASALSYLHDNYI 496
Y+ L +V+E + GG+LF I + F+E ++ + +S+ A+ YLH I
Sbjct: 79 VYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINI 138
Query: 497 VHRDIKPENLLVEMSGCHVKVLKVGDFGLAQRVL--RPMFTVCGTPTYVAPEILNESGYG 554
HRD+KPENLL + +LK+ DFG A+ + T C TP YVAPE+L Y
Sbjct: 139 AHRDVKPENLLYTSKRPNA-ILKLTDFGFAKETTSHNSLTTPCYTPYYVAPEVLGPEKYD 197
Query: 555 VKIDVWAAGVILYILLCGFPPFVSDTN--DQDELFDDILSGQYGFPSPYWDDISEEAKEL 612
D+W+ GVI+YILLCG+PPF S+ + I GQY FP+P W ++SEE K L
Sbjct: 198 KSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQYEFPNPEWSEVSEEVKML 257
Query: 613 ISHMLESNPDLRFSAEDVLDHPWLERS 639
I ++L++ P R + + ++HPW+ +S
Sbjct: 258 IRNLLKTEPTQRMTITEFMNHPWIMQS 284
>pdb|3R2Y|A Chain A, Mk2 Kinase Bound To Compound 1
pdb|3R30|A Chain A, Mk2 Kinase Bound To Compound 2
Length = 319
Score = 165 bits (418), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 95/267 (35%), Positives = 149/267 (55%), Gaps = 16/267 (5%)
Query: 383 QIIGDGNFAVVRQVYDKHKDMDCALKIIDKSKLLGKKQMIENEVNILRSVNHPNIIKLLD 442
Q++G G V Q+++K ALK++ K E E++ R+ P+I++++D
Sbjct: 23 QVLGLGINGKVLQIFNKRTQEKFALKMLQDCP----KARREVELH-WRASQCPHIVRIVD 77
Query: 443 EYDT----NNELYLVIELIKGGDLFDAIS--KNVKFSEEDSKFMTQSLASALSYLHDNYI 496
Y+ L +V+E + GG+LF I + F+E ++ + +S+ A+ YLH I
Sbjct: 78 VYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINI 137
Query: 497 VHRDIKPENLLVEMSGCHVKVLKVGDFGLAQRVL--RPMFTVCGTPTYVAPEILNESGYG 554
HRD+KPENLL + +LK+ DFG A+ + T C TP YVAPE+L Y
Sbjct: 138 AHRDVKPENLLYTSKRPNA-ILKLTDFGFAKETTSHNSLTTPCYTPYYVAPEVLGPEKYD 196
Query: 555 VKIDVWAAGVILYILLCGFPPFVSDTN--DQDELFDDILSGQYGFPSPYWDDISEEAKEL 612
D+W+ GVI+YILLCG+PPF S+ + I GQY FP+P W ++SEE K L
Sbjct: 197 KSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQYEFPNPEWSEVSEEVKML 256
Query: 613 ISHMLESNPDLRFSAEDVLDHPWLERS 639
I ++L++ P R + + ++HPW+ +S
Sbjct: 257 IRNLLKTEPTQRMTITEFMNHPWIMQS 283
>pdb|3R2B|A Chain A, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|B Chain B, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|C Chain C, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|D Chain D, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|E Chain E, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|F Chain F, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|G Chain G, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|H Chain H, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|I Chain I, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|J Chain J, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|K Chain K, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|L Chain L, Mk2 Kinase Bound To Compound 5b
Length = 318
Score = 165 bits (418), Expect = 7e-41, Method: Compositional matrix adjust.
Identities = 95/267 (35%), Positives = 149/267 (55%), Gaps = 16/267 (5%)
Query: 383 QIIGDGNFAVVRQVYDKHKDMDCALKIIDKSKLLGKKQMIENEVNILRSVNHPNIIKLLD 442
Q++G G V Q+++K ALK++ K E E++ R+ P+I++++D
Sbjct: 22 QVLGLGINGKVLQIFNKRTQEKFALKMLQDCP----KARREVELH-WRASQCPHIVRIVD 76
Query: 443 EYDT----NNELYLVIELIKGGDLFDAIS--KNVKFSEEDSKFMTQSLASALSYLHDNYI 496
Y+ L +V+E + GG+LF I + F+E ++ + +S+ A+ YLH I
Sbjct: 77 VYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINI 136
Query: 497 VHRDIKPENLLVEMSGCHVKVLKVGDFGLAQRVL--RPMFTVCGTPTYVAPEILNESGYG 554
HRD+KPENLL + +LK+ DFG A+ + T C TP YVAPE+L Y
Sbjct: 137 AHRDVKPENLLYTSKRPNA-ILKLTDFGFAKETTSHNSLTTPCYTPYYVAPEVLGPEKYD 195
Query: 555 VKIDVWAAGVILYILLCGFPPFVSDTN--DQDELFDDILSGQYGFPSPYWDDISEEAKEL 612
D+W+ GVI+YILLCG+PPF S+ + I GQY FP+P W ++SEE K L
Sbjct: 196 KSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQYEFPNPEWSEVSEEVKML 255
Query: 613 ISHMLESNPDLRFSAEDVLDHPWLERS 639
I ++L++ P R + + ++HPW+ +S
Sbjct: 256 IRNLLKTEPTQRMTITEFMNHPWIMQS 282
>pdb|2P3G|X Chain X, Crystal Structure Of A Pyrrolopyridine Inhibitor Bound To
Mapkap Kinase-2
pdb|3FYJ|X Chain X, Crystal Structure Of An Optimzied Benzothiophene Inhibitor
Bound To Mapkap Kinase-2 (Mk-2)
pdb|3FYK|X Chain X, Crystal Structure Of A Benzthiophene Lead Bound To Mapkap
Kinase-2 (Mk-2)
Length = 327
Score = 165 bits (418), Expect = 7e-41, Method: Compositional matrix adjust.
Identities = 95/267 (35%), Positives = 149/267 (55%), Gaps = 16/267 (5%)
Query: 383 QIIGDGNFAVVRQVYDKHKDMDCALKIIDKSKLLGKKQMIENEVNILRSVNHPNIIKLLD 442
Q++G G V Q+++K ALK++ K E E++ R+ P+I++++D
Sbjct: 24 QVLGLGINGKVLQIFNKRTQEKFALKMLQDCP----KARREVELH-WRASQCPHIVRIVD 78
Query: 443 EYDT----NNELYLVIELIKGGDLFDAIS--KNVKFSEEDSKFMTQSLASALSYLHDNYI 496
Y+ L +V+E + GG+LF I + F+E ++ + +S+ A+ YLH I
Sbjct: 79 VYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINI 138
Query: 497 VHRDIKPENLLVEMSGCHVKVLKVGDFGLAQRVL--RPMFTVCGTPTYVAPEILNESGYG 554
HRD+KPENLL + +LK+ DFG A+ + T C TP YVAPE+L Y
Sbjct: 139 AHRDVKPENLLYTSKRPNA-ILKLTDFGFAKETTSHNSLTTPCYTPYYVAPEVLGPEKYD 197
Query: 555 VKIDVWAAGVILYILLCGFPPFVSDTN--DQDELFDDILSGQYGFPSPYWDDISEEAKEL 612
D+W+ GVI+YILLCG+PPF S+ + I GQY FP+P W ++SEE K L
Sbjct: 198 KSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQYEFPNPEWSEVSEEVKML 257
Query: 613 ISHMLESNPDLRFSAEDVLDHPWLERS 639
I ++L++ P R + + ++HPW+ +S
Sbjct: 258 IRNLLKTEPTQRMTITEFMNHPWIMQS 284
>pdb|2WTW|A Chain A, Aurora-A Inhibitor Structure (2nd Crystal Form)
Length = 285
Score = 163 bits (413), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 92/266 (34%), Positives = 146/266 (54%), Gaps = 17/266 (6%)
Query: 376 LQRYSVGQIIGDGNFAVVRQVYDKHKDMDCALKIIDKSKL--LGKKQMIENEVNILRSVN 433
L+ + +G+ +G G F V +K ALK++ K++L G + + EV I +
Sbjct: 12 LEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLR 71
Query: 434 HPNIIKLLDEYDTNNELYLVIELIKGGDLFDAISKNVKFSEEDSKFMTQSLASALSYLHD 493
HPNI++L + +YL++E G+++ + K KF E+ + LA+ALSY H
Sbjct: 72 HPNILRLYGYFHDATRVYLILEYAPRGEVYKELQKLSKFDEQRTATYITELANALSYCHS 131
Query: 494 NYIVHRDIKPENLLVEMSGCHVKVLKVGDFGLAQRVLRP---MFTVCGTPTYVAPEILNE 550
++HRDIKPENLL+ +G LK+ DFG + V P T+CGT Y+ PE++
Sbjct: 132 KRVIHRDIKPENLLLGSAG----ELKIADFGWS--VHAPSSRRTTLCGTLDYLPPEMIEG 185
Query: 551 SGYGVKIDVWAAGVILYILLCGFPPFVSDTNDQDELFDDILSGQYGFPSPYWDDISEEAK 610
+ K+D+W+ GV+ Y L G PPF + N E + I ++ FP D ++E A+
Sbjct: 186 RMHDEKVDLWSLGVLCYEFLVGKPPF--EANTYQETYKRISRVEFTFP----DFVTEGAR 239
Query: 611 ELISHMLESNPDLRFSAEDVLDHPWL 636
+LIS +L+ NP R +VL+HPW+
Sbjct: 240 DLISRLLKHNPSQRPMLREVLEHPWI 265
>pdb|3HYH|A Chain A, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
pdb|3HYH|B Chain B, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
Length = 275
Score = 163 bits (413), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 104/265 (39%), Positives = 152/265 (57%), Gaps = 18/265 (6%)
Query: 379 YSVGQIIGDGNFAVVRQVYDKHKDMDCALKIIDKSKLLGKKQM---IENEVNILRSVNHP 435
Y + + +G+G+F V+ Y ALKII+K K+L K M IE E++ LR + HP
Sbjct: 15 YQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINK-KVLAKSDMQGRIEREISYLRLLRHP 73
Query: 436 NIIKLLDEYDTNNELYLVIELIKGGDLFDAISKNVKFSEEDSKFMTQSLASALSYLHDNY 495
+IIKL D + +E+ +VIE G +LFD I + K SE++++ Q + SA+ Y H +
Sbjct: 74 HIIKLYDVIKSKDEIIMVIEY-AGNELFDYIVQRDKMSEQEARRFFQQIISAVEYCHRHK 132
Query: 496 IVHRDIKPENLLVEMSGCHVKVLKVGDFGLAQRVLRPMF--TVCGTPTYVAPEILNESGY 553
IVHRD+KPENLL++ H+ V K+ DFGL+ + F T CG+P Y APE+++ Y
Sbjct: 133 IVHRDLKPENLLLDE---HLNV-KIADFGLSNIMTDGNFLKTSCGSPNYAAPEVISGKLY 188
Query: 554 -GVKIDVWAAGVILYILLCGFPPFVSDTNDQDELFDDILSGQYGFPSPYWDDISEEAKEL 612
G ++DVW+ GVILY++LC PF D LF +I +G Y P +S A L
Sbjct: 189 AGPEVDVWSCGVILYVMLCRRLPF--DDESIPVLFKNISNGVYTLPK----FLSPGAAGL 242
Query: 613 ISHMLESNPDLRFSAEDVLDHPWLE 637
I ML NP R S +++ W +
Sbjct: 243 IKRMLIVNPLNRISIHEIMQDDWFK 267
>pdb|3DAE|A Chain A, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
pdb|3DAE|B Chain B, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
Length = 283
Score = 163 bits (413), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 104/265 (39%), Positives = 152/265 (57%), Gaps = 18/265 (6%)
Query: 379 YSVGQIIGDGNFAVVRQVYDKHKDMDCALKIIDKSKLLGKKQM---IENEVNILRSVNHP 435
Y + + +G+G+F V+ Y ALKII+K K+L K M IE E++ LR + HP
Sbjct: 16 YQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINK-KVLAKSDMQGRIEREISYLRLLRHP 74
Query: 436 NIIKLLDEYDTNNELYLVIELIKGGDLFDAISKNVKFSEEDSKFMTQSLASALSYLHDNY 495
+IIKL D + +E+ +VIE G +LFD I + K SE++++ Q + SA+ Y H +
Sbjct: 75 HIIKLYDVIKSKDEIIMVIEY-AGNELFDYIVQRDKMSEQEARRFFQQIISAVEYCHRHK 133
Query: 496 IVHRDIKPENLLVEMSGCHVKVLKVGDFGLAQRVLRPMF--TVCGTPTYVAPEILNESGY 553
IVHRD+KPENLL++ H+ V K+ DFGL+ + F T CG+P Y APE+++ Y
Sbjct: 134 IVHRDLKPENLLLDE---HLNV-KIADFGLSNIMTDGNFLKTSCGSPNYAAPEVISGKLY 189
Query: 554 -GVKIDVWAAGVILYILLCGFPPFVSDTNDQDELFDDILSGQYGFPSPYWDDISEEAKEL 612
G ++DVW+ GVILY++LC PF D LF +I +G Y P +S A L
Sbjct: 190 AGPEVDVWSCGVILYVMLCRRLPF--DDESIPVLFKNISNGVYTLPK----FLSPGAAGL 243
Query: 613 ISHMLESNPDLRFSAEDVLDHPWLE 637
I ML NP R S +++ W +
Sbjct: 244 IKRMLIVNPLNRISIHEIMQDDWFK 268
>pdb|3MN3|A Chain A, An Inhibited Conformation For The Protein Kinase Domain Of
The Saccharomyces Cerevisiae Ampk Homolog Snf1
Length = 271
Score = 163 bits (412), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 104/265 (39%), Positives = 152/265 (57%), Gaps = 18/265 (6%)
Query: 379 YSVGQIIGDGNFAVVRQVYDKHKDMDCALKIIDKSKLLGKKQM---IENEVNILRSVNHP 435
Y + + +G+G+F V+ Y ALKII+K K+L K M IE E++ LR + HP
Sbjct: 6 YQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINK-KVLAKSDMQGRIEREISYLRLLRHP 64
Query: 436 NIIKLLDEYDTNNELYLVIELIKGGDLFDAISKNVKFSEEDSKFMTQSLASALSYLHDNY 495
+IIKL D + +E+ +VIE G +LFD I + K SE++++ Q + SA+ Y H +
Sbjct: 65 HIIKLYDVIKSKDEIIMVIEY-AGNELFDYIVQRDKMSEQEARRFFQQIISAVEYCHRHK 123
Query: 496 IVHRDIKPENLLVEMSGCHVKVLKVGDFGLAQRVLRPMF--TVCGTPTYVAPEILNESGY 553
IVHRD+KPENLL++ H+ V K+ DFGL+ + F T CG+P Y APE+++ Y
Sbjct: 124 IVHRDLKPENLLLDE---HLNV-KIADFGLSNIMTDGNFLKTSCGSPNYAAPEVISGKLY 179
Query: 554 -GVKIDVWAAGVILYILLCGFPPFVSDTNDQDELFDDILSGQYGFPSPYWDDISEEAKEL 612
G ++DVW+ GVILY++LC PF D LF +I +G Y P +S A L
Sbjct: 180 AGPEVDVWSCGVILYVMLCRRLPF--DDESIPVLFKNISNGVYTLPK----FLSPGAAGL 233
Query: 613 ISHMLESNPDLRFSAEDVLDHPWLE 637
I ML NP R S +++ W +
Sbjct: 234 IKRMLIVNPLNRISIHEIMQDDWFK 258
>pdb|3KA0|A Chain A, Mk2 Complex With Inhibitor
6-(5-(2-Aminopyrimidin-4-Ylamino)-2-
Hydroxyphenyl)-N-Methylbenzo[b]thiophene-2-Carboxamide
Length = 320
Score = 162 bits (411), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 94/267 (35%), Positives = 148/267 (55%), Gaps = 16/267 (5%)
Query: 383 QIIGDGNFAVVRQVYDKHKDMDCALKIIDKSKLLGKKQMIENEVNILRSVNHPNIIKLLD 442
Q++G G V Q+++K ALK++ K E E++ R+ P+I++++D
Sbjct: 22 QVLGLGINGKVLQIFNKRTQEKFALKMLQDCP----KARREVELH-WRASQCPHIVRIVD 76
Query: 443 EYDT----NNELYLVIELIKGGDLFDAIS--KNVKFSEEDSKFMTQSLASALSYLHDNYI 496
Y+ L +V+E + GG+LF I + F+E ++ + +S+ A+ YLH I
Sbjct: 77 VYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINI 136
Query: 497 VHRDIKPENLLVEMSGCHVKVLKVGDFGLAQRVL--RPMFTVCGTPTYVAPEILNESGYG 554
HRD+KPENLL + +LK+ DFG A+ + C TP YVAPE+L Y
Sbjct: 137 AHRDVKPENLLYTSKRPNA-ILKLTDFGFAKETTSHNSLTEPCYTPYYVAPEVLGPEKYD 195
Query: 555 VKIDVWAAGVILYILLCGFPPFVSDTN--DQDELFDDILSGQYGFPSPYWDDISEEAKEL 612
D+W+ GVI+YILLCG+PPF S+ + I GQY FP+P W ++SEE K L
Sbjct: 196 KSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQYEFPNPEWSEVSEEVKML 255
Query: 613 ISHMLESNPDLRFSAEDVLDHPWLERS 639
I ++L++ P R + + ++HPW+ +S
Sbjct: 256 IRNLLKTEPTQRMTITEFMNHPWIMQS 282
>pdb|2FH9|A Chain A, Structure And Dimerization Of The Kinase Domain From Yeast
Snf1
Length = 274
Score = 162 bits (411), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 104/265 (39%), Positives = 152/265 (57%), Gaps = 18/265 (6%)
Query: 379 YSVGQIIGDGNFAVVRQVYDKHKDMDCALKIIDKSKLLGKKQM---IENEVNILRSVNHP 435
Y + + +G+G+F V+ Y ALKII+K K+L K M IE E++ LR + HP
Sbjct: 10 YQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINK-KVLAKSDMQGRIEREISYLRLLRHP 68
Query: 436 NIIKLLDEYDTNNELYLVIELIKGGDLFDAISKNVKFSEEDSKFMTQSLASALSYLHDNY 495
+IIKL D + +E+ +VIE G +LFD I + K SE++++ Q + SA+ Y H +
Sbjct: 69 HIIKLYDVIKSKDEIIMVIEY-AGNELFDYIVQRDKMSEQEARRFFQQIISAVEYCHRHK 127
Query: 496 IVHRDIKPENLLVEMSGCHVKVLKVGDFGLAQRVLRPMF--TVCGTPTYVAPEILNESGY 553
IVHRD+KPENLL++ H+ V K+ DFGL+ + F T CG+P Y APE+++ Y
Sbjct: 128 IVHRDLKPENLLLDE---HLNV-KIADFGLSNIMTDGNFLKTSCGSPNYAAPEVISGKLY 183
Query: 554 -GVKIDVWAAGVILYILLCGFPPFVSDTNDQDELFDDILSGQYGFPSPYWDDISEEAKEL 612
G ++DVW+ GVILY++LC PF D LF +I +G Y P +S A L
Sbjct: 184 AGPEVDVWSCGVILYVMLCRRLPF--DDESIPVLFKNISNGVYTLPK----FLSPGAAGL 237
Query: 613 ISHMLESNPDLRFSAEDVLDHPWLE 637
I ML NP R S +++ W +
Sbjct: 238 IKRMLIVNPLNRISIHEIMQDDWFK 262
>pdb|3KN5|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN5|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN6|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
pdb|3KN6|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
Length = 325
Score = 162 bits (410), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 92/262 (35%), Positives = 148/262 (56%), Gaps = 14/262 (5%)
Query: 385 IGDGNFAVVRQVYDKHKDMDCALKIIDKSKLLGKKQMIENEVNILRSV-NHPNIIKLLDE 443
+G+G+F++ R+ K + A+KII K + + E+ L+ HPNI+KL +
Sbjct: 19 LGEGSFSICRKCVHKKSNQAFAVKIISKRM----EANTQKEITALKLCEGHPNIVKLHEV 74
Query: 444 YDTNNELYLVIELIKGGDLFDAISKNVKFSEEDSKFMTQSLASALSYLHDNYIVHRDIKP 503
+ +LV+EL+ GG+LF+ I K FSE ++ ++ + L SA+S++HD +VHRD+KP
Sbjct: 75 FHDQLHTFLVMELLNGGELFERIKKKKHFSETEASYIMRKLVSAVSHMHDVGVVHRDLKP 134
Query: 504 ENLLVEMSGCHVKVLKVGDFGLAQRVL---RPMFTVCGTPTYVAPEILNESGYGVKIDVW 560
ENLL ++++ K+ DFG A+ +P+ T C T Y APE+LN++GY D+W
Sbjct: 135 ENLLFTDENDNLEI-KIIDFGFARLKPPDNQPLKTPCFTLHYAAPELLNQNGYDESCDLW 193
Query: 561 AAGVILYILLCGFPPFVSD-----TNDQDELFDDILSGQYGFPSPYWDDISEEAKELISH 615
+ GVILY +L G PF S E+ I G + F W ++S+EAK+LI
Sbjct: 194 SLGVILYTMLSGQVPFQSHDRSLTCTSAVEIMKKIKKGDFSFEGEAWKNVSQEAKDLIQG 253
Query: 616 MLESNPDLRFSAEDVLDHPWLE 637
+L +P+ R + + WL+
Sbjct: 254 LLTVDPNKRLKMSGLRYNEWLQ 275
>pdb|2HW6|A Chain A, Crystal Structure Of Mnk1 Catalytic Domain
pdb|2HW6|B Chain B, Crystal Structure Of Mnk1 Catalytic Domain
Length = 307
Score = 162 bits (410), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 94/297 (31%), Positives = 155/297 (52%), Gaps = 30/297 (10%)
Query: 370 NIPSKLLQRYSV-GQIIGDGNFAVVRQVYDKHKDMDCALKIIDKSKLLGKKQMIENEVNI 428
++P K Y + +++G+G +A V+ + A+KII+K + ++ +
Sbjct: 5 SLPGKFEDMYKLTSELLGEGAYAKVQGAVSLQNGKEYAVKIIEKQAGHSRSRVFREVETL 64
Query: 429 LRSVNHPNIIKLLDEYDTNNELYLVIELIKGGDLFDAISKNVKFSEEDSKFMTQSLASAL 488
+ + NI++L++ ++ + YLV E ++GG + I K F+E ++ + + +A+AL
Sbjct: 65 YQCQGNKNILELIEFFEDDTRFYLVFEKLQGGSILAHIQKQKHFNEREASRVVRDVAAAL 124
Query: 489 SYLHDNYIVHRDIKPENLLVEMSGCHVKVLKVGDFGLAQR---------VLRPMFTV-CG 538
+LH I HRD+KPEN+L E S V +K+ DF L + P T CG
Sbjct: 125 DFLHTKGIAHRDLKPENILCE-SPEKVSPVKICDFDLGSGMKLNNSCTPITTPELTTPCG 183
Query: 539 TPTYVAPEIL-----NESGYGVKIDVWAAGVILYILLCGFPPFVSDTND----------- 582
+ Y+APE++ + Y + D+W+ GV+LYI+L G+PPFV
Sbjct: 184 SAEYMAPEVVEVFTDQATFYDKRCDLWSLGVVLYIMLSGYPPFVGHCGADCGWDRGEVCR 243
Query: 583 --QDELFDDILSGQYGFPSPYWDDISEEAKELISHMLESNPDLRFSAEDVLDHPWLE 637
Q++LF+ I G+Y FP W IS EAK+LIS +L + R SA VL HPW++
Sbjct: 244 VCQNKLFESIQEGKYEFPDKDWAHISSEAKDLISKLLVRDAKQRLSAAQVLQHPWVQ 300
>pdb|3ZGW|A Chain A, Crystal Structure Of Maternal Embryonic Leucine Zipper
Kinase (melk) In Complex With Amp-pnp
Length = 347
Score = 162 bits (409), Expect = 7e-40, Method: Compositional matrix adjust.
Identities = 92/268 (34%), Positives = 153/268 (57%), Gaps = 15/268 (5%)
Query: 374 KLLQRYSVGQIIGDGNFAVVRQVYDKHKDMDCALKIIDKSKLLGKKQMIENEVNILRSVN 433
+LL+ Y + + IG G FA V+ A+KI+DK+ L I+ E+ L+++
Sbjct: 7 ELLKYYELHETIGTGGFAKVKLACHILTGEMVAIKIMDKNTLGSDLPRIKTEIEALKNLR 66
Query: 434 HPNIIKLLDEYDTNNELYLVIELIKGGDLFDAISKNVKFSEEDSKFMTQSLASALSYLHD 493
H +I +L +T N++++V+E GG+LFD I + SEE+++ + + + SA++Y+H
Sbjct: 67 HQHICQLYHVLETANKIFMVLEYCPGGELFDYIISQDRLSEEETRVVFRQIVSAVAYVHS 126
Query: 494 NYIVHRDIKPENLLVEMSGCHVKVLKVGDFGLAQRVL----RPMFTVCGTPTYVAPEILN 549
HRD+KPENLL + LK+ DFGL + + T CG+ Y APE++
Sbjct: 127 QGYAHRDLKPENLLFD----EYHKLKLIDFGLCAKPKGNKDYHLQTCCGSLAYAAPELIQ 182
Query: 550 ESGY-GVKIDVWAAGVILYILLCGFPPFVSDTNDQDELFDDILSGQYGFPSPYWDDISEE 608
Y G + DVW+ G++LY+L+CGF PF D ++ L+ I+ G+Y P W +S
Sbjct: 183 GKSYLGSEADVWSMGILLYVLMCGFLPF--DDDNVMALYKKIMRGKYDVPK--W--LSPS 236
Query: 609 AKELISHMLESNPDLRFSAEDVLDHPWL 636
+ L+ ML+ +P R S +++L+HPW+
Sbjct: 237 SILLLQQMLQVDPKKRISMKNLLNHPWI 264
>pdb|2WQE|A Chain A, Structure Of S155r Aurora-A Somatic Mutant
Length = 262
Score = 162 bits (409), Expect = 7e-40, Method: Compositional matrix adjust.
Identities = 92/266 (34%), Positives = 146/266 (54%), Gaps = 17/266 (6%)
Query: 376 LQRYSVGQIIGDGNFAVVRQVYDKHKDMDCALKIIDKSKL--LGKKQMIENEVNILRSVN 433
L+ + +G+ +G G F V +K + ALK++ K++L G + + EV I +
Sbjct: 4 LEDFEIGRPLGKGKFGNVYLAREKQRKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLR 63
Query: 434 HPNIIKLLDEYDTNNELYLVIELIKGGDLFDAISKNVKFSEEDSKFMTQSLASALSYLHD 493
HPNI++L + +YL++E G ++ + K KF E+ + LA+ALSY H
Sbjct: 64 HPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHS 123
Query: 494 NYIVHRDIKPENLLVEMSGCHVKVLKVGDFGLAQRVLRP---MFTVCGTPTYVAPEILNE 550
++HRDIKPENLL+ +G LK+ DFG + V P T+CGT Y+ PE++
Sbjct: 124 KRVIHRDIKPENLLLGSAG----ELKIADFGWS--VHAPSSRRTTLCGTLDYLPPEMIEG 177
Query: 551 SGYGVKIDVWAAGVILYILLCGFPPFVSDTNDQDELFDDILSGQYGFPSPYWDDISEEAK 610
+ K+D+W+ GV+ Y L G PPF + N E + I ++ FP D ++E A+
Sbjct: 178 RMHDEKVDLWSLGVLCYEFLVGKPPF--EANTYQETYKRISRVEFTFP----DFVTEGAR 231
Query: 611 ELISHMLESNPDLRFSAEDVLDHPWL 636
+LIS +L+ NP R +VL+HPW+
Sbjct: 232 DLISRLLKHNPSQRPMLREVLEHPWI 257
>pdb|2XNG|A Chain A, Structure Of Aurora-A Bound To A Selective Imidazopyrazine
Inhibitor
Length = 283
Score = 161 bits (408), Expect = 9e-40, Method: Compositional matrix adjust.
Identities = 92/266 (34%), Positives = 145/266 (54%), Gaps = 17/266 (6%)
Query: 376 LQRYSVGQIIGDGNFAVVRQVYDKHKDMDCALKIIDKSKL--LGKKQMIENEVNILRSVN 433
L+ + +G+ +G G F V +K ALK++ K++L G + + EV I +
Sbjct: 10 LEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLR 69
Query: 434 HPNIIKLLDEYDTNNELYLVIELIKGGDLFDAISKNVKFSEEDSKFMTQSLASALSYLHD 493
HPNI++L + +YL++E G ++ + K KF E+ + LA+ALSY H
Sbjct: 70 HPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHS 129
Query: 494 NYIVHRDIKPENLLVEMSGCHVKVLKVGDFGLAQRVLRP---MFTVCGTPTYVAPEILNE 550
++HRDIKPENLL+ +G LK+ DFG + V P T+CGT Y+ PE++
Sbjct: 130 KRVIHRDIKPENLLLGSAG----ELKIADFGWS--VHAPSSRRTTLCGTLDYLPPEMIEG 183
Query: 551 SGYGVKIDVWAAGVILYILLCGFPPFVSDTNDQDELFDDILSGQYGFPSPYWDDISEEAK 610
+ K+D+W+ GV+ Y L G PPF + N E + I ++ FP D ++E A+
Sbjct: 184 RMHDEKVDLWSLGVLCYEFLVGKPPF--EANTYQETYKRISRVEFTFP----DFVTEGAR 237
Query: 611 ELISHMLESNPDLRFSAEDVLDHPWL 636
+LIS +L+ NP R +VL+HPW+
Sbjct: 238 DLISRLLKHNPSQRPMLREVLEHPWI 263
>pdb|2X6D|A Chain A, Aurora-A Bound To An Inhibitor
pdb|2X6E|A Chain A, Aurora-A Bound To An Inhibitor
Length = 285
Score = 161 bits (408), Expect = 9e-40, Method: Compositional matrix adjust.
Identities = 92/266 (34%), Positives = 145/266 (54%), Gaps = 17/266 (6%)
Query: 376 LQRYSVGQIIGDGNFAVVRQVYDKHKDMDCALKIIDKSKL--LGKKQMIENEVNILRSVN 433
L+ + +G+ +G G F V +K ALK++ K++L G + + EV I +
Sbjct: 12 LEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLR 71
Query: 434 HPNIIKLLDEYDTNNELYLVIELIKGGDLFDAISKNVKFSEEDSKFMTQSLASALSYLHD 493
HPNI++L + +YL++E G ++ + K KF E+ + LA+ALSY H
Sbjct: 72 HPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHS 131
Query: 494 NYIVHRDIKPENLLVEMSGCHVKVLKVGDFGLAQRVLRP---MFTVCGTPTYVAPEILNE 550
++HRDIKPENLL+ +G LK+ DFG + V P T+CGT Y+ PE++
Sbjct: 132 KRVIHRDIKPENLLLGSAG----ELKIADFGWS--VHAPSSRRTTLCGTLDYLPPEMIEG 185
Query: 551 SGYGVKIDVWAAGVILYILLCGFPPFVSDTNDQDELFDDILSGQYGFPSPYWDDISEEAK 610
+ K+D+W+ GV+ Y L G PPF + N E + I ++ FP D ++E A+
Sbjct: 186 RMHDEKVDLWSLGVLCYEFLVGKPPF--EANTYQETYKRISRVEFTFP----DFVTEGAR 239
Query: 611 ELISHMLESNPDLRFSAEDVLDHPWL 636
+LIS +L+ NP R +VL+HPW+
Sbjct: 240 DLISRLLKHNPSQRPMLREVLEHPWI 265
>pdb|2J50|A Chain A, Structure Of Aurora-2 In Complex With Pha-739358
pdb|2J50|B Chain B, Structure Of Aurora-2 In Complex With Pha-739358
Length = 280
Score = 161 bits (408), Expect = 9e-40, Method: Compositional matrix adjust.
Identities = 92/266 (34%), Positives = 145/266 (54%), Gaps = 17/266 (6%)
Query: 376 LQRYSVGQIIGDGNFAVVRQVYDKHKDMDCALKIIDKSKL--LGKKQMIENEVNILRSVN 433
L+ + +G+ +G G F V +K ALK++ K++L G + + EV I +
Sbjct: 7 LEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLR 66
Query: 434 HPNIIKLLDEYDTNNELYLVIELIKGGDLFDAISKNVKFSEEDSKFMTQSLASALSYLHD 493
HPNI++L + +YL++E G ++ + K KF E+ + LA+ALSY H
Sbjct: 67 HPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHS 126
Query: 494 NYIVHRDIKPENLLVEMSGCHVKVLKVGDFGLAQRVLRP---MFTVCGTPTYVAPEILNE 550
++HRDIKPENLL+ +G LK+ DFG + V P T+CGT Y+ PE++
Sbjct: 127 KRVIHRDIKPENLLLGSAG----ELKIADFGWS--VHAPSSRRTTLCGTLDYLPPEMIEG 180
Query: 551 SGYGVKIDVWAAGVILYILLCGFPPFVSDTNDQDELFDDILSGQYGFPSPYWDDISEEAK 610
+ K+D+W+ GV+ Y L G PPF + N E + I ++ FP D ++E A+
Sbjct: 181 RMHDEKVDLWSLGVLCYEFLVGKPPF--EANTYQETYKRISRVEFTFP----DFVTEGAR 234
Query: 611 ELISHMLESNPDLRFSAEDVLDHPWL 636
+LIS +L+ NP R +VL+HPW+
Sbjct: 235 DLISRLLKHNPSQRPMLREVLEHPWI 260
>pdb|1MUO|A Chain A, Crystal Structure Of Aurora-2, An Oncogenic Serine-
Threonine Kinase
Length = 297
Score = 161 bits (408), Expect = 9e-40, Method: Compositional matrix adjust.
Identities = 92/266 (34%), Positives = 145/266 (54%), Gaps = 17/266 (6%)
Query: 376 LQRYSVGQIIGDGNFAVVRQVYDKHKDMDCALKIIDKSKL--LGKKQMIENEVNILRSVN 433
L+ + +G+ +G G F V +K ALK++ K++L G + + EV I +
Sbjct: 24 LEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLR 83
Query: 434 HPNIIKLLDEYDTNNELYLVIELIKGGDLFDAISKNVKFSEEDSKFMTQSLASALSYLHD 493
HPNI++L + +YL++E G ++ + K KF E+ + LA+ALSY H
Sbjct: 84 HPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHS 143
Query: 494 NYIVHRDIKPENLLVEMSGCHVKVLKVGDFGLAQRVLRP---MFTVCGTPTYVAPEILNE 550
++HRDIKPENLL+ +G LK+ DFG + V P T+CGT Y+ PE++
Sbjct: 144 KRVIHRDIKPENLLLGSAG----ELKIADFGWS--VHAPSSRRTTLCGTLDYLPPEMIEG 197
Query: 551 SGYGVKIDVWAAGVILYILLCGFPPFVSDTNDQDELFDDILSGQYGFPSPYWDDISEEAK 610
+ K+D+W+ GV+ Y L G PPF + N E + I ++ FP D ++E A+
Sbjct: 198 RMHDEKVDLWSLGVLCYEFLVGKPPF--EANTYQETYKRISRVEFTFP----DFVTEGAR 251
Query: 611 ELISHMLESNPDLRFSAEDVLDHPWL 636
+LIS +L+ NP R +VL+HPW+
Sbjct: 252 DLISRLLKHNPSQRPMLREVLEHPWI 277
>pdb|2DWB|A Chain A, Aurora-A Kinase Complexed With Amppnp
Length = 285
Score = 161 bits (408), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 92/266 (34%), Positives = 144/266 (54%), Gaps = 17/266 (6%)
Query: 376 LQRYSVGQIIGDGNFAVVRQVYDKHKDMDCALKIIDKSKL--LGKKQMIENEVNILRSVN 433
L+ + +G+ +G G F V +K ALK++ K++L G + + EV I +
Sbjct: 12 LEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLR 71
Query: 434 HPNIIKLLDEYDTNNELYLVIELIKGGDLFDAISKNVKFSEEDSKFMTQSLASALSYLHD 493
HPNI++L + +YL++E G ++ + K KF E+ + LA+ALSY H
Sbjct: 72 HPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHS 131
Query: 494 NYIVHRDIKPENLLVEMSGCHVKVLKVGDFGLAQRVLRP---MFTVCGTPTYVAPEILNE 550
++HRDIKPENLL+ +G LK+ DFG + V P T+CGT Y+ PE +
Sbjct: 132 KRVIHRDIKPENLLLGSAG----ELKIADFGWS--VHAPSSRRTTLCGTLDYLPPEXIEG 185
Query: 551 SGYGVKIDVWAAGVILYILLCGFPPFVSDTNDQDELFDDILSGQYGFPSPYWDDISEEAK 610
+ K+D+W+ GV+ Y L G PPF + N E + I ++ FP D ++E A+
Sbjct: 186 RXHDEKVDLWSLGVLCYEFLVGKPPF--EANTYQETYKRISRVEFTFP----DFVTEGAR 239
Query: 611 ELISHMLESNPDLRFSAEDVLDHPWL 636
+LIS +L+ NP R +VL+HPW+
Sbjct: 240 DLISRLLKHNPSQRPXLREVLEHPWI 265
>pdb|2J4Z|A Chain A, Structure Of Aurora-2 In Complex With Pha-680626
pdb|2J4Z|B Chain B, Structure Of Aurora-2 In Complex With Pha-680626
Length = 306
Score = 161 bits (407), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 92/266 (34%), Positives = 145/266 (54%), Gaps = 17/266 (6%)
Query: 376 LQRYSVGQIIGDGNFAVVRQVYDKHKDMDCALKIIDKSKL--LGKKQMIENEVNILRSVN 433
L+ + +G+ +G G F V +K ALK++ K++L G + + EV I +
Sbjct: 33 LEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLR 92
Query: 434 HPNIIKLLDEYDTNNELYLVIELIKGGDLFDAISKNVKFSEEDSKFMTQSLASALSYLHD 493
HPNI++L + +YL++E G ++ + K KF E+ + LA+ALSY H
Sbjct: 93 HPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHS 152
Query: 494 NYIVHRDIKPENLLVEMSGCHVKVLKVGDFGLAQRVLRP---MFTVCGTPTYVAPEILNE 550
++HRDIKPENLL+ +G LK+ DFG + V P T+CGT Y+ PE++
Sbjct: 153 KRVIHRDIKPENLLLGSAG----ELKIADFGWS--VHAPSSRRTTLCGTLDYLPPEMIEG 206
Query: 551 SGYGVKIDVWAAGVILYILLCGFPPFVSDTNDQDELFDDILSGQYGFPSPYWDDISEEAK 610
+ K+D+W+ GV+ Y L G PPF + N E + I ++ FP D ++E A+
Sbjct: 207 RMHDEKVDLWSLGVLCYEFLVGKPPF--EANTYQETYKRISRVEFTFP----DFVTEGAR 260
Query: 611 ELISHMLESNPDLRFSAEDVLDHPWL 636
+LIS +L+ NP R +VL+HPW+
Sbjct: 261 DLISRLLKHNPSQRPMLREVLEHPWI 286
>pdb|1MQ4|A Chain A, Crystal Structure Of Aurora-A Protein Kinase
pdb|2NP8|A Chain A, Structural Basis For The Inhibition Of Aurora A Kinase By
A Novel Class Of High Affinity Disubstituted Pyrimidine
Inhibitors
pdb|2X81|A Chain A, Structure Of Aurora A In Complex With Mln8054
pdb|3MYG|A Chain A, Aurora A Kinase Complexed With Sch 1473759
pdb|3VAP|A Chain A, Synthesis And Sar Studies Of Imidazo-[1,2-A]-Pyrazine
Aurora Kinase Inhibitors With Improved Off Target Kinase
Selectivity
Length = 272
Score = 160 bits (406), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 92/266 (34%), Positives = 145/266 (54%), Gaps = 17/266 (6%)
Query: 376 LQRYSVGQIIGDGNFAVVRQVYDKHKDMDCALKIIDKSKL--LGKKQMIENEVNILRSVN 433
L+ + +G+ +G G F V +K ALK++ K++L G + + EV I +
Sbjct: 11 LEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLR 70
Query: 434 HPNIIKLLDEYDTNNELYLVIELIKGGDLFDAISKNVKFSEEDSKFMTQSLASALSYLHD 493
HPNI++L + +YL++E G ++ + K KF E+ + LA+ALSY H
Sbjct: 71 HPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHS 130
Query: 494 NYIVHRDIKPENLLVEMSGCHVKVLKVGDFGLAQRVLRP---MFTVCGTPTYVAPEILNE 550
++HRDIKPENLL+ +G LK+ DFG + V P T+CGT Y+ PE++
Sbjct: 131 KRVIHRDIKPENLLLGSAG----ELKIADFGWS--VHAPSSRRTTLCGTLDYLPPEMIEG 184
Query: 551 SGYGVKIDVWAAGVILYILLCGFPPFVSDTNDQDELFDDILSGQYGFPSPYWDDISEEAK 610
+ K+D+W+ GV+ Y L G PPF + N E + I ++ FP D ++E A+
Sbjct: 185 RMHDEKVDLWSLGVLCYEFLVGKPPF--EANTYQETYKRISRVEFTFP----DFVTEGAR 238
Query: 611 ELISHMLESNPDLRFSAEDVLDHPWL 636
+LIS +L+ NP R +VL+HPW+
Sbjct: 239 DLISRLLKHNPSQRPMLREVLEHPWI 264
>pdb|2W1D|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1E|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1F|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 160 bits (406), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 92/266 (34%), Positives = 145/266 (54%), Gaps = 17/266 (6%)
Query: 376 LQRYSVGQIIGDGNFAVVRQVYDKHKDMDCALKIIDKSKL--LGKKQMIENEVNILRSVN 433
L+ + +G+ +G G F V +K ALK++ K++L G + + EV I +
Sbjct: 10 LEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLR 69
Query: 434 HPNIIKLLDEYDTNNELYLVIELIKGGDLFDAISKNVKFSEEDSKFMTQSLASALSYLHD 493
HPNI++L + +YL++E G ++ + K KF E+ + LA+ALSY H
Sbjct: 70 HPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHS 129
Query: 494 NYIVHRDIKPENLLVEMSGCHVKVLKVGDFGLAQRVLRP---MFTVCGTPTYVAPEILNE 550
++HRDIKPENLL+ +G LK+ DFG + V P T+CGT Y+ PE++
Sbjct: 130 KRVIHRDIKPENLLLGSAG----ELKIADFGWS--VHAPSSRRTTLCGTLDYLPPEMIEG 183
Query: 551 SGYGVKIDVWAAGVILYILLCGFPPFVSDTNDQDELFDDILSGQYGFPSPYWDDISEEAK 610
+ K+D+W+ GV+ Y L G PPF + N E + I ++ FP D ++E A+
Sbjct: 184 RMHDEKVDLWSLGVLCYEFLVGKPPF--EANTYQETYKRISRVEFTFP----DFVTEGAR 237
Query: 611 ELISHMLESNPDLRFSAEDVLDHPWL 636
+LIS +L+ NP R +VL+HPW+
Sbjct: 238 DLISRLLKHNPSQRPMLREVLEHPWI 263
>pdb|3O50|A Chain A, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O50|B Chain B, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O51|A Chain A, Crystal Structure Of Anthranilamide 10 Bound To Auroraa
pdb|3EFW|A Chain A, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
pdb|3EFW|B Chain B, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
Length = 267
Score = 160 bits (406), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 92/266 (34%), Positives = 145/266 (54%), Gaps = 17/266 (6%)
Query: 376 LQRYSVGQIIGDGNFAVVRQVYDKHKDMDCALKIIDKSKL--LGKKQMIENEVNILRSVN 433
L+ + +G+ +G G F V +K ALK++ K++L G + + EV I +
Sbjct: 6 LEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLR 65
Query: 434 HPNIIKLLDEYDTNNELYLVIELIKGGDLFDAISKNVKFSEEDSKFMTQSLASALSYLHD 493
HPNI++L + +YL++E G ++ + K KF E+ + LA+ALSY H
Sbjct: 66 HPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHS 125
Query: 494 NYIVHRDIKPENLLVEMSGCHVKVLKVGDFGLAQRVLRP---MFTVCGTPTYVAPEILNE 550
++HRDIKPENLL+ +G LK+ DFG + V P T+CGT Y+ PE++
Sbjct: 126 KRVIHRDIKPENLLLGSAG----ELKIADFGWS--VHAPSSRRTTLCGTLDYLPPEMIEG 179
Query: 551 SGYGVKIDVWAAGVILYILLCGFPPFVSDTNDQDELFDDILSGQYGFPSPYWDDISEEAK 610
+ K+D+W+ GV+ Y L G PPF + N E + I ++ FP D ++E A+
Sbjct: 180 RMHDEKVDLWSLGVLCYEFLVGKPPF--EANTYQETYKRISRVEFTFP----DFVTEGAR 233
Query: 611 ELISHMLESNPDLRFSAEDVLDHPWL 636
+LIS +L+ NP R +VL+HPW+
Sbjct: 234 DLISRLLKHNPSQRPMLREVLEHPWI 259
>pdb|3UNZ|A Chain A, Aurora A In Complex With Rpm1679
pdb|3UNZ|B Chain B, Aurora A In Complex With Rpm1679
pdb|3UO4|A Chain A, Aurora A In Complex With Rpm1680
pdb|3UO5|A Chain A, Aurora A In Complex With Yl1-038-31
pdb|3UO6|A Chain A, Aurora A In Complex With Yl5-083
pdb|3UO6|B Chain B, Aurora A In Complex With Yl5-083
pdb|3UOD|A Chain A, Aurora A In Complex With Rpm1693
pdb|3UOH|A Chain A, Aurora A In Complex With Rpm1722
pdb|3UOH|B Chain B, Aurora A In Complex With Rpm1722
pdb|3UOJ|A Chain A, Aurora A In Complex With Rpm1715
pdb|3UOJ|B Chain B, Aurora A In Complex With Rpm1715
pdb|3UOK|A Chain A, Aurora A In Complex With Yl5-81-1
pdb|3UOK|B Chain B, Aurora A In Complex With Yl5-81-1
pdb|3UOL|A Chain A, Aurora A In Complex With So2-162
pdb|3UOL|B Chain B, Aurora A In Complex With So2-162
pdb|3UP2|A Chain A, Aurora A In Complex With Rpm1686
pdb|3UP7|A Chain A, Aurora A In Complex With Yl1-038-09
pdb|4DEA|A Chain A, Aurora A In Complex With Yl1-038-18
pdb|4DEB|A Chain A, Aurora A In Complex With Rk2-17-01
pdb|4DED|A Chain A, Aurora A In Complex With Yl1-038-21
pdb|4DEE|A Chain A, Aurora A In Complex With Adp
Length = 279
Score = 160 bits (406), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 92/266 (34%), Positives = 145/266 (54%), Gaps = 17/266 (6%)
Query: 376 LQRYSVGQIIGDGNFAVVRQVYDKHKDMDCALKIIDKSKL--LGKKQMIENEVNILRSVN 433
L+ + +G+ +G G F V +K ALK++ K++L G + + EV I +
Sbjct: 8 LEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLR 67
Query: 434 HPNIIKLLDEYDTNNELYLVIELIKGGDLFDAISKNVKFSEEDSKFMTQSLASALSYLHD 493
HPNI++L + +YL++E G ++ + K KF E+ + LA+ALSY H
Sbjct: 68 HPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHS 127
Query: 494 NYIVHRDIKPENLLVEMSGCHVKVLKVGDFGLAQRVLRPMF---TVCGTPTYVAPEILNE 550
++HRDIKPENLL+ +G LK+ DFG + V P T+CGT Y+ PE++
Sbjct: 128 KRVIHRDIKPENLLLGSAG----ELKIADFGWS--VHAPSSRRDTLCGTLDYLPPEMIEG 181
Query: 551 SGYGVKIDVWAAGVILYILLCGFPPFVSDTNDQDELFDDILSGQYGFPSPYWDDISEEAK 610
+ K+D+W+ GV+ Y L G PPF + N E + I ++ FP D ++E A+
Sbjct: 182 RMHDEKVDLWSLGVLCYEFLVGKPPF--EANTYQETYKRISRVEFTFP----DFVTEGAR 235
Query: 611 ELISHMLESNPDLRFSAEDVLDHPWL 636
+LIS +L+ NP R +VL+HPW+
Sbjct: 236 DLISRLLKHNPSQRPMLREVLEHPWI 261
>pdb|2C6E|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
pdb|2C6E|B Chain B, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
Length = 283
Score = 160 bits (405), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 90/264 (34%), Positives = 143/264 (54%), Gaps = 13/264 (4%)
Query: 376 LQRYSVGQIIGDGNFAVVRQVYDKHKDMDCALKIIDKSKL--LGKKQMIENEVNILRSVN 433
L+ + +G+ +G G F V +K ALK++ K++L G + + EV I +
Sbjct: 12 LEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLR 71
Query: 434 HPNIIKLLDEYDTNNELYLVIELIKGGDLFDAISKNVKFSEEDSKFMTQSLASALSYLHD 493
HPNI++L + +YL++E G ++ + K KF E+ + LA+ALSY H
Sbjct: 72 HPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHS 131
Query: 494 NYIVHRDIKPENLLVEMSGCHVKVLKVGDFGLAQRVLRPMFT-VCGTPTYVAPEILNESG 552
++HRDIKPENLL+ +G LK+ DFG + T +CGT Y+ PE++
Sbjct: 132 KRVIHRDIKPENLLLGSAG----ELKIADFGWSVHAPSSRRTDLCGTLDYLPPEMIEGRM 187
Query: 553 YGVKIDVWAAGVILYILLCGFPPFVSDTNDQDELFDDILSGQYGFPSPYWDDISEEAKEL 612
+ K+D+W+ GV+ Y L G PPF + N E + I ++ FP D ++E A++L
Sbjct: 188 HDEKVDLWSLGVLCYEFLVGKPPF--EANTYQETYKRISRVEFTFP----DFVTEGARDL 241
Query: 613 ISHMLESNPDLRFSAEDVLDHPWL 636
IS +L+ NP R +VL+HPW+
Sbjct: 242 ISRLLKHNPSQRPMLREVLEHPWI 265
>pdb|2XRU|A Chain A, Aurora-A T288e Complexed With Pha-828300
Length = 280
Score = 160 bits (405), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 90/264 (34%), Positives = 143/264 (54%), Gaps = 13/264 (4%)
Query: 376 LQRYSVGQIIGDGNFAVVRQVYDKHKDMDCALKIIDKSKL--LGKKQMIENEVNILRSVN 433
L+ + +G+ +G G F V +K ALK++ K++L G + + EV I +
Sbjct: 7 LEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLR 66
Query: 434 HPNIIKLLDEYDTNNELYLVIELIKGGDLFDAISKNVKFSEEDSKFMTQSLASALSYLHD 493
HPNI++L + +YL++E G ++ + K KF E+ + LA+ALSY H
Sbjct: 67 HPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHS 126
Query: 494 NYIVHRDIKPENLLVEMSGCHVKVLKVGDFGLAQRVLRPMFT-VCGTPTYVAPEILNESG 552
++HRDIKPENLL+ +G LK+ DFG + T +CGT Y+ PE++
Sbjct: 127 KRVIHRDIKPENLLLGSAG----ELKIADFGWSVHAPSSRRTELCGTLDYLPPEMIEGRM 182
Query: 553 YGVKIDVWAAGVILYILLCGFPPFVSDTNDQDELFDDILSGQYGFPSPYWDDISEEAKEL 612
+ K+D+W+ GV+ Y L G PPF + N E + I ++ FP D ++E A++L
Sbjct: 183 HDEKVDLWSLGVLCYEFLVGKPPF--EANTYQETYKRISRVEFTFP----DFVTEGARDL 236
Query: 613 ISHMLESNPDLRFSAEDVLDHPWL 636
IS +L+ NP R +VL+HPW+
Sbjct: 237 ISRLLKHNPSQRPMLREVLEHPWI 260
>pdb|3FDN|A Chain A, Structure-Based Drug Design Of Novel Aurora Kinase A
Inhibitors: Structure Basis For Potency And Specificity
pdb|3K5U|A Chain A, Identification, Sar Studies And X-Ray Cocrystal Analysis
Of A Novel Furano-Pyrimidine Aurora Kinase A Inhibitor
pdb|3M11|A Chain A, Crystal Structure Of Aurora A Kinase Complexed With
Inhibitor
Length = 279
Score = 160 bits (405), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 90/264 (34%), Positives = 143/264 (54%), Gaps = 13/264 (4%)
Query: 376 LQRYSVGQIIGDGNFAVVRQVYDKHKDMDCALKIIDKSKL--LGKKQMIENEVNILRSVN 433
L+ + +G+ +G G F V +K ALK++ K++L G + + EV I +
Sbjct: 8 LEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLR 67
Query: 434 HPNIIKLLDEYDTNNELYLVIELIKGGDLFDAISKNVKFSEEDSKFMTQSLASALSYLHD 493
HPNI++L + +YL++E G ++ + K KF E+ + LA+ALSY H
Sbjct: 68 HPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHS 127
Query: 494 NYIVHRDIKPENLLVEMSGCHVKVLKVGDFGLAQRVLRPMFT-VCGTPTYVAPEILNESG 552
++HRDIKPENLL+ +G LK+ DFG + T +CGT Y+ PE++
Sbjct: 128 KRVIHRDIKPENLLLGSAG----ELKIADFGWSVHAPSSRRTDLCGTLDYLPPEMIEGRM 183
Query: 553 YGVKIDVWAAGVILYILLCGFPPFVSDTNDQDELFDDILSGQYGFPSPYWDDISEEAKEL 612
+ K+D+W+ GV+ Y L G PPF + N E + I ++ FP D ++E A++L
Sbjct: 184 HDEKVDLWSLGVLCYEFLVGKPPF--EANTYQETYKRISRVEFTFP----DFVTEGARDL 237
Query: 613 ISHMLESNPDLRFSAEDVLDHPWL 636
IS +L+ NP R +VL+HPW+
Sbjct: 238 ISRLLKHNPSQRPMLREVLEHPWI 261
>pdb|2C6D|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With
Adpnp
Length = 275
Score = 160 bits (405), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 90/264 (34%), Positives = 143/264 (54%), Gaps = 13/264 (4%)
Query: 376 LQRYSVGQIIGDGNFAVVRQVYDKHKDMDCALKIIDKSKL--LGKKQMIENEVNILRSVN 433
L+ + +G+ +G G F V +K ALK++ K++L G + + EV I +
Sbjct: 7 LEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLR 66
Query: 434 HPNIIKLLDEYDTNNELYLVIELIKGGDLFDAISKNVKFSEEDSKFMTQSLASALSYLHD 493
HPNI++L + +YL++E G ++ + K KF E+ + LA+ALSY H
Sbjct: 67 HPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHS 126
Query: 494 NYIVHRDIKPENLLVEMSGCHVKVLKVGDFGLAQRVLRPMFT-VCGTPTYVAPEILNESG 552
++HRDIKPENLL+ +G LK+ DFG + T +CGT Y+ PE++
Sbjct: 127 KRVIHRDIKPENLLLGSAG----ELKIADFGWSVHAPSSRRTDLCGTLDYLPPEMIEGRM 182
Query: 553 YGVKIDVWAAGVILYILLCGFPPFVSDTNDQDELFDDILSGQYGFPSPYWDDISEEAKEL 612
+ K+D+W+ GV+ Y L G PPF + N E + I ++ FP D ++E A++L
Sbjct: 183 HDEKVDLWSLGVLCYEFLVGKPPF--EANTYQETYKRISRVEFTFP----DFVTEGARDL 236
Query: 613 ISHMLESNPDLRFSAEDVLDHPWL 636
IS +L+ NP R +VL+HPW+
Sbjct: 237 ISRLLKHNPSQRPMLREVLEHPWI 260
>pdb|3LAU|A Chain A, Crystal Structure Of Aurora2 Kinase In Complex With A
Gsk3beta Inhibitor
Length = 287
Score = 160 bits (405), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 90/264 (34%), Positives = 143/264 (54%), Gaps = 13/264 (4%)
Query: 376 LQRYSVGQIIGDGNFAVVRQVYDKHKDMDCALKIIDKSKL--LGKKQMIENEVNILRSVN 433
L+ + +G+ +G G F V +K ALK++ K++L G + + EV I +
Sbjct: 7 LEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLR 66
Query: 434 HPNIIKLLDEYDTNNELYLVIELIKGGDLFDAISKNVKFSEEDSKFMTQSLASALSYLHD 493
HPNI++L + +YL++E G ++ + K KF E+ + LA+ALSY H
Sbjct: 67 HPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHS 126
Query: 494 NYIVHRDIKPENLLVEMSGCHVKVLKVGDFGLAQRVLRPMFT-VCGTPTYVAPEILNESG 552
++HRDIKPENLL+ +G LK+ DFG + T +CGT Y+ PE++
Sbjct: 127 KRVIHRDIKPENLLLGSAG----ELKIADFGWSVHAPSSRRTDLCGTLDYLPPEMIEGRM 182
Query: 553 YGVKIDVWAAGVILYILLCGFPPFVSDTNDQDELFDDILSGQYGFPSPYWDDISEEAKEL 612
+ K+D+W+ GV+ Y L G PPF + N E + I ++ FP D ++E A++L
Sbjct: 183 HDEKVDLWSLGVLCYEFLVGKPPF--EANTYQETYKRISRVEFTFP----DFVTEGARDL 236
Query: 613 ISHMLESNPDLRFSAEDVLDHPWL 636
IS +L+ NP R +VL+HPW+
Sbjct: 237 ISRLLKHNPSQRPMLREVLEHPWI 260
>pdb|1NXK|A Chain A, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
pdb|1NXK|B Chain B, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
pdb|1NXK|C Chain C, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
pdb|1NXK|D Chain D, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
Length = 400
Score = 160 bits (404), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 95/269 (35%), Positives = 143/269 (53%), Gaps = 16/269 (5%)
Query: 381 VGQIIGDGNFAVVRQVYDKHKDMDCALKIIDKSKLLGKKQMIENEVNILRSVNHPNIIKL 440
Q++G G V Q+++K ALK + K E E++ R+ P+I+++
Sbjct: 66 TSQVLGLGINGKVLQIFNKRTQEKFALKXLQDCP----KARREVELH-WRASQCPHIVRI 120
Query: 441 LDEYDT----NNELYLVIELIKGGDLFDAIS--KNVKFSEEDSKFMTQSLASALSYLHDN 494
+D Y+ L +V E + GG+LF I + F+E ++ + +S+ A+ YLH
Sbjct: 121 VDVYENLYAGRKCLLIVXECLDGGELFSRIQDRGDQAFTEREASEIXKSIGEAIQYLHSI 180
Query: 495 YIVHRDIKPENLLVEMSGCHVKVLKVGDFGLAQRVL--RPMFTVCGTPTYVAPEILNESG 552
I HRD+KPENLL + +LK+ DFG A+ + T C TP YVAPE+L
Sbjct: 181 NIAHRDVKPENLLYTSKRPNA-ILKLTDFGFAKETTSHNSLTTPCYTPYYVAPEVLGPEK 239
Query: 553 YGVKIDVWAAGVILYILLCGFPPFVSDTN--DQDELFDDILSGQYGFPSPYWDDISEEAK 610
Y D W+ GVI YILLCG+PPF S+ I GQY FP+P W ++SEE K
Sbjct: 240 YDKSCDXWSLGVIXYILLCGYPPFYSNHGLAISPGXKTRIRXGQYEFPNPEWSEVSEEVK 299
Query: 611 ELISHMLESNPDLRFSAEDVLDHPWLERS 639
LI ++L++ P R + + +HPW+ +S
Sbjct: 300 XLIRNLLKTEPTQRXTITEFXNHPWIXQS 328
>pdb|3E5A|A Chain A, Crystal Structure Of Aurora A In Complex With Vx-680 And
Tpx2
Length = 268
Score = 160 bits (404), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 90/264 (34%), Positives = 143/264 (54%), Gaps = 13/264 (4%)
Query: 376 LQRYSVGQIIGDGNFAVVRQVYDKHKDMDCALKIIDKSKL--LGKKQMIENEVNILRSVN 433
L+ + +G+ +G G F V +K ALK++ K++L G + + EV I +
Sbjct: 7 LEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLR 66
Query: 434 HPNIIKLLDEYDTNNELYLVIELIKGGDLFDAISKNVKFSEEDSKFMTQSLASALSYLHD 493
HPNI++L + +YL++E G ++ + K KF E+ + LA+ALSY H
Sbjct: 67 HPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHS 126
Query: 494 NYIVHRDIKPENLLVEMSGCHVKVLKVGDFGLAQRVLRPMFT-VCGTPTYVAPEILNESG 552
++HRDIKPENLL+ +G LK+ DFG + T +CGT Y+ PE++
Sbjct: 127 KRVIHRDIKPENLLLGSAG----ELKIADFGWSVHAPSSRRTXLCGTLDYLPPEMIEGRM 182
Query: 553 YGVKIDVWAAGVILYILLCGFPPFVSDTNDQDELFDDILSGQYGFPSPYWDDISEEAKEL 612
+ K+D+W+ GV+ Y L G PPF + N E + I ++ FP D ++E A++L
Sbjct: 183 HDEKVDLWSLGVLCYEFLVGKPPF--EANTYQETYKRISRVEFTFP----DFVTEGARDL 236
Query: 613 ISHMLESNPDLRFSAEDVLDHPWL 636
IS +L+ NP R +VL+HPW+
Sbjct: 237 ISRLLKHNPSQRPMLREVLEHPWI 260
>pdb|1OL6|A Chain A, Structure Of Unphosphorylated D274n Mutant Of Aurora-a
Length = 282
Score = 160 bits (404), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 91/266 (34%), Positives = 145/266 (54%), Gaps = 17/266 (6%)
Query: 376 LQRYSVGQIIGDGNFAVVRQVYDKHKDMDCALKIIDKSKL--LGKKQMIENEVNILRSVN 433
L+ + +G+ +G G F V +K ALK++ K++L G + + EV I +
Sbjct: 9 LEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLR 68
Query: 434 HPNIIKLLDEYDTNNELYLVIELIKGGDLFDAISKNVKFSEEDSKFMTQSLASALSYLHD 493
HPNI++L + +YL++E G ++ + K KF E+ + LA+ALSY H
Sbjct: 69 HPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHS 128
Query: 494 NYIVHRDIKPENLLVEMSGCHVKVLKVGDFGLAQRVLRP---MFTVCGTPTYVAPEILNE 550
++HRDIKPENLL+ +G LK+ +FG + V P T+CGT Y+ PE++
Sbjct: 129 KRVIHRDIKPENLLLGSAG----ELKIANFGWS--VHAPSSRRTTLCGTLDYLPPEMIEG 182
Query: 551 SGYGVKIDVWAAGVILYILLCGFPPFVSDTNDQDELFDDILSGQYGFPSPYWDDISEEAK 610
+ K+D+W+ GV+ Y L G PPF + N E + I ++ FP D ++E A+
Sbjct: 183 RMHDEKVDLWSLGVLCYEFLVGKPPF--EANTYQETYKRISRVEFTFP----DFVTEGAR 236
Query: 611 ELISHMLESNPDLRFSAEDVLDHPWL 636
+LIS +L+ NP R +VL+HPW+
Sbjct: 237 DLISRLLKHNPSQRPMLREVLEHPWI 262
>pdb|1OL5|A Chain A, Structure Of Aurora-A 122-403, Phosphorylated On Thr287,
Thr288 And Bound To Tpx2 1-43
pdb|1OL7|A Chain A, Structure Of Human Aurora-A 122-403 Phosphorylated On
Thr287, Thr288
Length = 282
Score = 159 bits (403), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 91/266 (34%), Positives = 144/266 (54%), Gaps = 17/266 (6%)
Query: 376 LQRYSVGQIIGDGNFAVVRQVYDKHKDMDCALKIIDKSKL--LGKKQMIENEVNILRSVN 433
L+ + +G+ +G G F V +K ALK++ K++L G + + EV I +
Sbjct: 9 LEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLR 68
Query: 434 HPNIIKLLDEYDTNNELYLVIELIKGGDLFDAISKNVKFSEEDSKFMTQSLASALSYLHD 493
HPNI++L + +YL++E G ++ + K KF E+ + LA+ALSY H
Sbjct: 69 HPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHS 128
Query: 494 NYIVHRDIKPENLLVEMSGCHVKVLKVGDFGLAQRVLRP---MFTVCGTPTYVAPEILNE 550
++HRDIKPENLL+ +G LK+ DFG + V P +CGT Y+ PE++
Sbjct: 129 KRVIHRDIKPENLLLGSAG----ELKIADFGWS--VHAPSSRRXXLCGTLDYLPPEMIEG 182
Query: 551 SGYGVKIDVWAAGVILYILLCGFPPFVSDTNDQDELFDDILSGQYGFPSPYWDDISEEAK 610
+ K+D+W+ GV+ Y L G PPF + N E + I ++ FP D ++E A+
Sbjct: 183 RMHDEKVDLWSLGVLCYEFLVGKPPF--EANTYQETYKRISRVEFTFP----DFVTEGAR 236
Query: 611 ELISHMLESNPDLRFSAEDVLDHPWL 636
+LIS +L+ NP R +VL+HPW+
Sbjct: 237 DLISRLLKHNPSQRPMLREVLEHPWI 262
>pdb|2XNE|A Chain A, Structure Of Aurora-A Bound To An Imidazopyrazine
Inhibitor
Length = 272
Score = 159 bits (403), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 91/266 (34%), Positives = 145/266 (54%), Gaps = 17/266 (6%)
Query: 376 LQRYSVGQIIGDGNFAVVRQVYDKHKDMDCALKIIDKSKL--LGKKQMIENEVNILRSVN 433
L+ + +G+ +G G F V +K ALK++ K++L G + + EV I +
Sbjct: 10 LEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLR 69
Query: 434 HPNIIKLLDEYDTNNELYLVIELIKGGDLFDAISKNVKFSEEDSKFMTQSLASALSYLHD 493
HPNI++L + +YL++E G ++ + K KF E+ + LA+ALSY H
Sbjct: 70 HPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHS 129
Query: 494 NYIVHRDIKPENLLVEMSGCHVKVLKVGDFGLAQRVLRP---MFTVCGTPTYVAPEILNE 550
++HRDIKPENLL+ +G LK+ +FG + V P T+CGT Y+ PE++
Sbjct: 130 KRVIHRDIKPENLLLGSAG----ELKIANFGWS--VHAPSSRRTTLCGTLDYLPPEMIEG 183
Query: 551 SGYGVKIDVWAAGVILYILLCGFPPFVSDTNDQDELFDDILSGQYGFPSPYWDDISEEAK 610
+ K+D+W+ GV+ Y L G PPF + N E + I ++ FP D ++E A+
Sbjct: 184 RMHDEKVDLWSLGVLCYEFLVGKPPF--EANTYQETYKRISRVEFTFP----DFVTEGAR 237
Query: 611 ELISHMLESNPDLRFSAEDVLDHPWL 636
+LIS +L+ NP R +VL+HPW+
Sbjct: 238 DLISRLLKHNPSQRPMLREVLEHPWI 263
>pdb|3NRM|A Chain A, Imidazo[1,2-A]pyrazine-Based Aurora Kinase Inhibitors
Length = 283
Score = 159 bits (402), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 91/266 (34%), Positives = 144/266 (54%), Gaps = 17/266 (6%)
Query: 376 LQRYSVGQIIGDGNFAVVRQVYDKHKDMDCALKIIDKSKL--LGKKQMIENEVNILRSVN 433
L+ + +G+ +G G F V +K ALK++ K++L G + + EV I +
Sbjct: 10 LEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLR 69
Query: 434 HPNIIKLLDEYDTNNELYLVIELIKGGDLFDAISKNVKFSEEDSKFMTQSLASALSYLHD 493
HPNI++L + +YL++E G ++ + K KF E+ + LA+ALSY H
Sbjct: 70 HPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHS 129
Query: 494 NYIVHRDIKPENLLVEMSGCHVKVLKVGDFGLAQRVLRP---MFTVCGTPTYVAPEILNE 550
++HRDIKPENLL+ +G LK+ DFG + V P +CGT Y+ PE++
Sbjct: 130 KRVIHRDIKPENLLLGSAG----ELKIADFGWS--VHAPSSRRAALCGTLDYLPPEMIEG 183
Query: 551 SGYGVKIDVWAAGVILYILLCGFPPFVSDTNDQDELFDDILSGQYGFPSPYWDDISEEAK 610
+ K+D+W+ GV+ Y L G PPF + N E + I ++ FP D ++E A+
Sbjct: 184 RMHDEKVDLWSLGVLCYEFLVGKPPF--EANTYQETYKRISRVEFTFP----DFVTEGAR 237
Query: 611 ELISHMLESNPDLRFSAEDVLDHPWL 636
+LIS +L+ NP R +VL+HPW+
Sbjct: 238 DLISRLLKHNPSQRPMLREVLEHPWI 263
>pdb|2W1C|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1G|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 159 bits (401), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 91/266 (34%), Positives = 144/266 (54%), Gaps = 17/266 (6%)
Query: 376 LQRYSVGQIIGDGNFAVVRQVYDKHKDMDCALKIIDKSKL--LGKKQMIENEVNILRSVN 433
L+ + +G+ +G G F V +K ALK++ K++L G + + EV I +
Sbjct: 10 LEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLR 69
Query: 434 HPNIIKLLDEYDTNNELYLVIELIKGGDLFDAISKNVKFSEEDSKFMTQSLASALSYLHD 493
HPNI++L + +YL++E G ++ + K KF E+ + LA+ALSY H
Sbjct: 70 HPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHS 129
Query: 494 NYIVHRDIKPENLLVEMSGCHVKVLKVGDFGLAQRVLRP---MFTVCGTPTYVAPEILNE 550
++HRDIKPENLL+ +G LK+ DFG + V P +CGT Y+ PE++
Sbjct: 130 KRVIHRDIKPENLLLGSAG----ELKIADFGWS--VHAPSSRRXXLCGTLDYLPPEMIEG 183
Query: 551 SGYGVKIDVWAAGVILYILLCGFPPFVSDTNDQDELFDDILSGQYGFPSPYWDDISEEAK 610
+ K+D+W+ GV+ Y L G PPF + N E + I ++ FP D ++E A+
Sbjct: 184 RMHDEKVDLWSLGVLCYEFLVGKPPF--EANTYQETYKRISRVEFTFP----DFVTEGAR 237
Query: 611 ELISHMLESNPDLRFSAEDVLDHPWL 636
+LIS +L+ NP R +VL+HPW+
Sbjct: 238 DLISRLLKHNPSQRPMLREVLEHPWI 263
>pdb|3HA6|A Chain A, Crystal Structure Of Aurora A In Complex With Tpx2 And
Compound 10
Length = 268
Score = 159 bits (401), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 91/266 (34%), Positives = 144/266 (54%), Gaps = 17/266 (6%)
Query: 376 LQRYSVGQIIGDGNFAVVRQVYDKHKDMDCALKIIDKSKL--LGKKQMIENEVNILRSVN 433
L+ + +G+ +G G F V +K ALK++ K++L G + + EV I +
Sbjct: 7 LEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLR 66
Query: 434 HPNIIKLLDEYDTNNELYLVIELIKGGDLFDAISKNVKFSEEDSKFMTQSLASALSYLHD 493
HPNI++L + +YL++E G ++ + K KF E+ + LA+ALSY H
Sbjct: 67 HPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHS 126
Query: 494 NYIVHRDIKPENLLVEMSGCHVKVLKVGDFGLAQRVLRP---MFTVCGTPTYVAPEILNE 550
++HRDIKPENLL+ +G LK+ DFG + V P +CGT Y+ PE++
Sbjct: 127 KRVIHRDIKPENLLLGSAG----ELKIADFGWS--VHAPSSRRXXLCGTLDYLPPEMIEG 180
Query: 551 SGYGVKIDVWAAGVILYILLCGFPPFVSDTNDQDELFDDILSGQYGFPSPYWDDISEEAK 610
+ K+D+W+ GV+ Y L G PPF + N E + I ++ FP D ++E A+
Sbjct: 181 RMHDEKVDLWSLGVLCYEFLVGKPPF--EANTYQETYKRISRVEFTFP----DFVTEGAR 234
Query: 611 ELISHMLESNPDLRFSAEDVLDHPWL 636
+LIS +L+ NP R +VL+HPW+
Sbjct: 235 DLISRLLKHNPSQRPMLREVLEHPWI 260
>pdb|3H0Y|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|B Chain B, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|C Chain C, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H10|A Chain A, Aurora A Inhibitor Complex
pdb|3H10|B Chain B, Aurora A Inhibitor Complex
pdb|3H10|D Chain D, Aurora A Inhibitor Complex
pdb|3P9J|A Chain A, Aurora A Kinase Domain With Phthalazinone Pyrazole
Inhibitor
Length = 268
Score = 159 bits (401), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 91/266 (34%), Positives = 144/266 (54%), Gaps = 17/266 (6%)
Query: 376 LQRYSVGQIIGDGNFAVVRQVYDKHKDMDCALKIIDKSKL--LGKKQMIENEVNILRSVN 433
L+ + +G+ +G G F V +K ALK++ K++L G + + EV I +
Sbjct: 7 LEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLR 66
Query: 434 HPNIIKLLDEYDTNNELYLVIELIKGGDLFDAISKNVKFSEEDSKFMTQSLASALSYLHD 493
HPNI++L + +YL++E G ++ + K KF E+ + LA+ALSY H
Sbjct: 67 HPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHS 126
Query: 494 NYIVHRDIKPENLLVEMSGCHVKVLKVGDFGLAQRVLRP---MFTVCGTPTYVAPEILNE 550
++HRDIKPENLL+ +G LK+ DFG + V P +CGT Y+ PE++
Sbjct: 127 KRVIHRDIKPENLLLGSAG----ELKIADFGWS--VHAPSSRRAALCGTLDYLPPEMIEG 180
Query: 551 SGYGVKIDVWAAGVILYILLCGFPPFVSDTNDQDELFDDILSGQYGFPSPYWDDISEEAK 610
+ K+D+W+ GV+ Y L G PPF + N E + I ++ FP D ++E A+
Sbjct: 181 RMHDEKVDLWSLGVLCYEFLVGKPPF--EANTYQETYKRISRVEFTFP----DFVTEGAR 234
Query: 611 ELISHMLESNPDLRFSAEDVLDHPWL 636
+LIS +L+ NP R +VL+HPW+
Sbjct: 235 DLISRLLKHNPSQRPMLREVLEHPWI 260
>pdb|2BMC|A Chain A, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|B Chain B, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|C Chain C, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|D Chain D, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|E Chain E, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|F Chain F, Aurora-2 T287d T288d Complexed With Pha-680632
Length = 306
Score = 158 bits (400), Expect = 8e-39, Method: Compositional matrix adjust.
Identities = 91/266 (34%), Positives = 144/266 (54%), Gaps = 17/266 (6%)
Query: 376 LQRYSVGQIIGDGNFAVVRQVYDKHKDMDCALKIIDKSKL--LGKKQMIENEVNILRSVN 433
L+ + +G+ +G G F V +K ALK++ K++L G + + EV I +
Sbjct: 33 LEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLR 92
Query: 434 HPNIIKLLDEYDTNNELYLVIELIKGGDLFDAISKNVKFSEEDSKFMTQSLASALSYLHD 493
HPNI++L + +YL++E G ++ + K KF E+ + LA+ALSY H
Sbjct: 93 HPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHS 152
Query: 494 NYIVHRDIKPENLLVEMSGCHVKVLKVGDFGLAQRVLRPMFT---VCGTPTYVAPEILNE 550
++HRDIKPENLL+ +G LK+ DFG + V P +CGT Y+ PE++
Sbjct: 153 KRVIHRDIKPENLLLGSAG----ELKIADFGWS--VHAPSSRRDDLCGTLDYLPPEMIEG 206
Query: 551 SGYGVKIDVWAAGVILYILLCGFPPFVSDTNDQDELFDDILSGQYGFPSPYWDDISEEAK 610
+ K+D+W+ GV+ Y L G PPF + N E + I ++ FP D ++E A+
Sbjct: 207 RMHDEKVDLWSLGVLCYEFLVGKPPF--EANTYQETYKRISRVEFTFP----DFVTEGAR 260
Query: 611 ELISHMLESNPDLRFSAEDVLDHPWL 636
+LIS +L+ NP R +VL+HPW+
Sbjct: 261 DLISRLLKHNPSQRPMLREVLEHPWI 286
>pdb|3COH|A Chain A, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
pdb|3COH|B Chain B, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
Length = 268
Score = 157 bits (398), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 90/266 (33%), Positives = 146/266 (54%), Gaps = 17/266 (6%)
Query: 376 LQRYSVGQIIGDGNFAVVRQVYDKHKDMDCALKIIDKSKL--LGKKQMIENEVNILRSVN 433
L+ + +G+ +G G F V +K+ ALK++ K++L G + + EV I +
Sbjct: 7 LEDFEIGRPLGKGKFGNVYLAREKNSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLR 66
Query: 434 HPNIIKLLDEYDTNNELYLVIELIKGGDLFDAISKNVKFSEEDSKFMTQSLASALSYLHD 493
HPNI++L + + +YL++E G ++ + K KF E+ + LA+ALSY H
Sbjct: 67 HPNILRLYGYFHDSTRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHS 126
Query: 494 NYIVHRDIKPENLLVEMSGCHVKVLKVGDFGLAQRVLRP---MFTVCGTPTYVAPEILNE 550
++HRDIKPENLL+ +G LK+ DFG + V P +CGT Y+ PE++
Sbjct: 127 KKVIHRDIKPENLLLGSAG----ELKIADFGWS--VHAPSSRRAALCGTLDYLPPEMIEG 180
Query: 551 SGYGVKIDVWAAGVILYILLCGFPPFVSDTNDQDELFDDILSGQYGFPSPYWDDISEEAK 610
+ K+D+W+ GV+ Y L G PPF + N + + I ++ FP D ++E A+
Sbjct: 181 RMHDEKVDLWSLGVLCYEFLVGKPPF--EANTYQDTYKRISRVEFTFP----DFVTEGAR 234
Query: 611 ELISHMLESNPDLRFSAEDVLDHPWL 636
+LIS +L+ NP R +VL+HPW+
Sbjct: 235 DLISRLLKHNPSQRPMLREVLEHPWI 260
>pdb|1ZMU|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
pdb|1ZMU|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
Length = 327
Score = 157 bits (398), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 92/262 (35%), Positives = 145/262 (55%), Gaps = 14/262 (5%)
Query: 379 YSVGQIIGDGNFAVVRQVYDKHKDMDCALKIIDKSKLLGKK-QMIENEVNILRSVNHPNI 437
Y + + IG GNFA V+ + A+KIIDK++L Q + EV I++ +NHPNI
Sbjct: 16 YRLLKTIGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFREVRIMKVLNHPNI 75
Query: 438 IKLLDEYDTNNELYLVIELIKGGDLFDAISKNVKFSEEDSKFMTQSLASALSYLHDNYIV 497
+KL + +T LYLV+E GG++FD + + + E++++ + + SA+ Y H +IV
Sbjct: 76 VKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFRQIVSAVQYCHQKFIV 135
Query: 498 HRDIKPENLLVEMSGCHVKVLKVGDFGLAQRVL--RPMFTVCGTPTYVAPEILNESGY-G 554
HRD+K ENLL++ +K+ DFG + + T CG+P Y APE+ Y G
Sbjct: 136 HRDLKAENLLLDADMN----IKIADFGFSNEFTFGNKLDTFCGSPPYAAPELFQGKKYDG 191
Query: 555 VKIDVWAAGVILYILLCGFPPFVSDTNDQDELFDDILSGQYGFPSPYWDDISEEAKELIS 614
++DVW+ GVILY L+ G PF D + EL + +L G+Y P +S + + L+
Sbjct: 192 PEVDVWSLGVILYTLVSGSLPF--DGQNLKELRERVLRGKYRIPFY----MSTDCENLLK 245
Query: 615 HMLESNPDLRFSAEDVLDHPWL 636
L NP R + E ++ W+
Sbjct: 246 KFLILNPSKRGTLEQIMKDRWM 267
>pdb|2R0I|A Chain A, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
pdb|2R0I|B Chain B, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
Length = 327
Score = 157 bits (398), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 92/262 (35%), Positives = 145/262 (55%), Gaps = 14/262 (5%)
Query: 379 YSVGQIIGDGNFAVVRQVYDKHKDMDCALKIIDKSKLLGKK-QMIENEVNILRSVNHPNI 437
Y + + IG GNFA V+ + A+KIIDK++L Q + EV I++ +NHPNI
Sbjct: 16 YRLLKTIGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFREVRIMKVLNHPNI 75
Query: 438 IKLLDEYDTNNELYLVIELIKGGDLFDAISKNVKFSEEDSKFMTQSLASALSYLHDNYIV 497
+KL + +T LYLV+E GG++FD + + + E++++ + + SA+ Y H +IV
Sbjct: 76 VKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFRQIVSAVQYCHQKFIV 135
Query: 498 HRDIKPENLLVEMSGCHVKVLKVGDFGLAQRVL--RPMFTVCGTPTYVAPEILNESGY-G 554
HRD+K ENLL++ +K+ DFG + + T CG+P Y APE+ Y G
Sbjct: 136 HRDLKAENLLLDADMN----IKIADFGFSNEFTFGNKLDTFCGSPPYAAPELFQGKKYDG 191
Query: 555 VKIDVWAAGVILYILLCGFPPFVSDTNDQDELFDDILSGQYGFPSPYWDDISEEAKELIS 614
++DVW+ GVILY L+ G PF D + EL + +L G+Y P +S + + L+
Sbjct: 192 PEVDVWSLGVILYTLVSGSLPF--DGQNLKELRERVLRGKYRIPFY----MSTDCENLLK 245
Query: 615 HMLESNPDLRFSAEDVLDHPWL 636
L NP R + E ++ W+
Sbjct: 246 KFLILNPSKRGTLEQIMKDRWM 267
>pdb|2BFX|A Chain A, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2BFX|B Chain B, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2VGP|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGP|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGO|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|2VGO|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|3ZTX|A Chain A, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen.
pdb|3ZTX|B Chain B, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen
Length = 284
Score = 157 bits (397), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 88/264 (33%), Positives = 144/264 (54%), Gaps = 17/264 (6%)
Query: 379 YSVGQIIGDGNFAVVRQVYDKHKDMDCALKIIDKSKLL--GKKQMIENEVNILRSVNHPN 436
+ +G+ +G G F V +K ALK++ KS+L G + + E+ I + HPN
Sbjct: 16 FDIGRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLRHPN 75
Query: 437 IIKLLDEYDTNNELYLVIELIKGGDLFDAISKNVKFSEEDSKFMTQSLASALSYLHDNYI 496
I+++ + + +YL++E G+L+ + K+ +F E+ S + LA AL Y H+ +
Sbjct: 76 ILRMYNYFHDRKRIYLMLEFAPRGELYKELQKHGRFDEQRSATFMEELADALHYCHERKV 135
Query: 497 VHRDIKPENLLVEMSGCHVKVLKVGDFGLAQRVLRPMF---TVCGTPTYVAPEILNESGY 553
+HRDIKPENLL+ G LK+ DFG + V P +CGT Y+ PE++ +
Sbjct: 136 IHRDIKPENLLMGYKG----ELKIADFGWS--VHAPSLRRRXMCGTLDYLPPEMIEGKTH 189
Query: 554 GVKIDVWAAGVILYILLCGFPPFVSDTNDQDELFDDILSGQYGFPSPYWDDISEEAKELI 613
K+D+W AGV+ Y L G PPF D+ E I++ FP P+ +S+ +K+LI
Sbjct: 190 DEKVDLWCAGVLCYEFLVGMPPF--DSPSHTETHRRIVNVDLKFP-PF---LSDGSKDLI 243
Query: 614 SHMLESNPDLRFSAEDVLDHPWLE 637
S +L +P R + V++HPW++
Sbjct: 244 SKLLRYHPPQRLPLKGVMEHPWVK 267
>pdb|2VRX|A Chain A, Structure Of Aurora B Kinase In Complex With Zm447439
pdb|2VRX|B Chain B, Structure Of Aurora B Kinase In Complex With Zm447439
Length = 285
Score = 157 bits (397), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 88/264 (33%), Positives = 144/264 (54%), Gaps = 17/264 (6%)
Query: 379 YSVGQIIGDGNFAVVRQVYDKHKDMDCALKIIDKSKLL--GKKQMIENEVNILRSVNHPN 436
+ +G+ +G G F V +K ALK++ KS+L G + + E+ I + HPN
Sbjct: 17 FDIGRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLRHPN 76
Query: 437 IIKLLDEYDTNNELYLVIELIKGGDLFDAISKNVKFSEEDSKFMTQSLASALSYLHDNYI 496
I+++ + + +YL++E G+L+ + K+ +F E+ S + LA AL Y H+ +
Sbjct: 77 ILRMYNYFHDRKRIYLMLEFAPRGELYKELQKHGRFDEQRSATFMEELADALHYCHERKV 136
Query: 497 VHRDIKPENLLVEMSGCHVKVLKVGDFGLAQRVLRPMF---TVCGTPTYVAPEILNESGY 553
+HRDIKPENLL+ G LK+ DFG + V P +CGT Y+ PE++ +
Sbjct: 137 IHRDIKPENLLMGYKG----ELKIADFGWS--VHAPSLRRRXMCGTLDYLPPEMIEGKTH 190
Query: 554 GVKIDVWAAGVILYILLCGFPPFVSDTNDQDELFDDILSGQYGFPSPYWDDISEEAKELI 613
K+D+W AGV+ Y L G PPF D+ E I++ FP P+ +S+ +K+LI
Sbjct: 191 DEKVDLWCAGVLCYEFLVGMPPF--DSPSHTETHRRIVNVDLKFP-PF---LSDGSKDLI 244
Query: 614 SHMLESNPDLRFSAEDVLDHPWLE 637
S +L +P R + V++HPW++
Sbjct: 245 SKLLRYHPPQRLPLKGVMEHPWVK 268
>pdb|3D14|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly,
Lys240->arg, Met302- >leu) In Complex With
1-{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)- Ethyl]-
Thiazol-2-Yl}-3-(3-Trifluoromethyl-Phenyl)-Urea
pdb|3DJ5|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 290.
pdb|3DJ6|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 823.
pdb|3DJ7|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 130.
pdb|3D15|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
1-(3-Chloro-Phenyl)-3-
{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)-
Ethyl]-Thiazol-2- Yl}-Urea [sns-314]
pdb|3D2I|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With 1-{5-[2-(1-Methyl-1h-
Pyrazolo[4,
3-D]pyrimidin-7-Ylamino)-Ethyl]-Thiazol-2-Yl}-3-
(3-Trifluoromethyl-Phenyl)-Urea
pdb|3D2K|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
[7-(2-{2-[3-(3-Chloro-
Phenyl)-Ureido]-Thiazol-5-Yl}-Ethylamino)-Pyrazolo[4,3-
D]pyrimidin-1-Yl]-Acetic Acid
Length = 272
Score = 157 bits (397), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 89/267 (33%), Positives = 146/267 (54%), Gaps = 17/267 (6%)
Query: 376 LQRYSVGQIIGDGNFAVVRQVYDKHKDMDCALKIIDKSKL--LGKKQMIENEVNILRSVN 433
L+ + +G+ +G G F V ++ ALK++ K++L G + + EV I +
Sbjct: 11 LEDFDIGRPLGKGKFGNVYLARERQSKFILALKVLFKTQLEKAGVEHQLRREVEIQSHLR 70
Query: 434 HPNIIKLLDEYDTNNELYLVIELIKGGDLFDAISKNVKFSEEDSKFMTQSLASALSYLHD 493
HPNI++L + +YL++E G ++ + K +F E+ + LA+ALSY H
Sbjct: 71 HPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSRFDEQRTATYITELANALSYCHS 130
Query: 494 NYIVHRDIKPENLLVEMSGCHVKVLKVGDFGLAQRVLRP---MFTVCGTPTYVAPEILNE 550
++HRDIKPENLL+ +G LK+ DFG + V P T+CGT Y+ PE++
Sbjct: 131 KRVIHRDIKPENLLLGSNG----ELKIADFGWS--VHAPSSRRTTLCGTLDYLPPEMIEG 184
Query: 551 SGYGVKIDVWAAGVILYILLCGFPPFVSDTNDQDELFDDILSGQYGFPSPYWDDISEEAK 610
+ K+D+W+ GV+ Y L G PPF + T E + I ++ FP D ++E A+
Sbjct: 185 RMHDEKVDLWSLGVLCYEFLVGMPPFEAHT--YQETYRRISRVEFTFP----DFVTEGAR 238
Query: 611 ELISHMLESNPDLRFSAEDVLDHPWLE 637
+LIS +L+ N R + +VL+HPW++
Sbjct: 239 DLISRLLKHNASQRLTLAEVLEHPWIK 265
>pdb|3R21|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|3R22|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|4DHF|A Chain A, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
pdb|4DHF|B Chain B, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
Length = 271
Score = 157 bits (397), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 91/266 (34%), Positives = 144/266 (54%), Gaps = 17/266 (6%)
Query: 376 LQRYSVGQIIGDGNFAVVRQVYDKHKDMDCALKIIDKSKL--LGKKQMIENEVNILRSVN 433
L+ + +G+ +G G F V +K ALK++ K++L G + + EV I +
Sbjct: 10 LEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLR 69
Query: 434 HPNIIKLLDEYDTNNELYLVIELIKGGDLFDAISKNVKFSEEDSKFMTQSLASALSYLHD 493
HPNI++L + +YL++E G ++ + K KF E+ + LA+ALSY H
Sbjct: 70 HPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHS 129
Query: 494 NYIVHRDIKPENLLVEMSGCHVKVLKVGDFGLAQRVLRPMFT---VCGTPTYVAPEILNE 550
++HRDIKPENLL+ +G LK+ DFG + V P +CGT Y+ PE++
Sbjct: 130 KRVIHRDIKPENLLLGSAG----ELKIADFGWS--VHAPSSRRDDLCGTLDYLPPEMIEG 183
Query: 551 SGYGVKIDVWAAGVILYILLCGFPPFVSDTNDQDELFDDILSGQYGFPSPYWDDISEEAK 610
+ K+D+W+ GV+ Y L G PPF + N E + I ++ FP D ++E A+
Sbjct: 184 RMHDEKVDLWSLGVLCYEFLVGKPPF--EANTYQETYKRISRVEFTFP----DFVTEGAR 237
Query: 611 ELISHMLESNPDLRFSAEDVLDHPWL 636
+LIS +L+ NP R +VL+HPW+
Sbjct: 238 DLISRLLKHNPSQRPMLREVLEHPWI 263
>pdb|1FOT|A Chain A, Structure Of The Unliganded Camp-Dependent Protein Kinase
Catalytic Subunit From Saccharomyces Cerevisiae
Length = 318
Score = 157 bits (397), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 85/269 (31%), Positives = 154/269 (57%), Gaps = 9/269 (3%)
Query: 372 PSKLLQRYSVGQIIGDGNFAVVRQVYDKHKDMDCALKIIDKSKLLGKKQM--IENEVNIL 429
P LQ + + + +G G+F V + +H A+K++ K ++ KQ+ +E +L
Sbjct: 1 PKYSLQDFQILRTLGTGSFGRVHLIRSRHNGRYYAMKVLKKEIVVRLKQVEHTNDERLML 60
Query: 430 RSVNHPNIIKLLDEYDTNNELYLVIELIKGGDLFDAISKNVKFSEEDSKFMTQSLASALS 489
V HP II++ + +++++++ I+GG+LF + K+ +F +KF + AL
Sbjct: 61 SIVTHPFIIRMWGTFQDAQQIFMIMDYIEGGELFSLLRKSQRFPNPVAKFYAAEVCLALE 120
Query: 490 YLHDNYIVHRDIKPENLLVEMSGCHVKVLKVGDFGLAQRVLRPMFTVCGTPTYVAPEILN 549
YLH I++RD+KPEN+L++ +G H+K+ DFG A+ V + +CGTP Y+APE+++
Sbjct: 121 YLHSKDIIYRDLKPENILLDKNG-HIKIT---DFGFAKYVPDVTYXLCGTPDYIAPEVVS 176
Query: 550 ESGYGVKIDVWAAGVILYILLCGFPPFVSDTNDQDELFDDILSGQYGFPSPYWDDISEEA 609
Y ID W+ G+++Y +L G+ PF D+N + ++ IL+ + FP + +D+ +
Sbjct: 177 TKPYNKSIDWWSFGILIYEMLAGYTPFY-DSNTM-KTYEKILNAELRFPPFFNEDVKDLL 234
Query: 610 KELISHMLESN-PDLRFSAEDVLDHPWLE 637
LI+ L +L+ EDV +HPW +
Sbjct: 235 SRLITRDLSQRLGNLQNGTEDVKNHPWFK 263
>pdb|2WTV|A Chain A, Aurora-A Inhibitor Structure
pdb|2WTV|B Chain B, Aurora-A Inhibitor Structure
pdb|2WTV|C Chain C, Aurora-A Inhibitor Structure
pdb|2WTV|D Chain D, Aurora-A Inhibitor Structure
Length = 285
Score = 157 bits (396), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 90/266 (33%), Positives = 144/266 (54%), Gaps = 17/266 (6%)
Query: 376 LQRYSVGQIIGDGNFAVVRQVYDKHKDMDCALKIIDKSKL--LGKKQMIENEVNILRSVN 433
L+ + +G+ +G G F V +K ALK++ K++L G + + EV I +
Sbjct: 12 LEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLR 71
Query: 434 HPNIIKLLDEYDTNNELYLVIELIKGGDLFDAISKNVKFSEEDSKFMTQSLASALSYLHD 493
HPNI++L + +YL++E G+++ + K KF E+ + LA+ALSY H
Sbjct: 72 HPNILRLYGYFHDATRVYLILEYAPRGEVYKELQKLSKFDEQRTATYITELANALSYCHS 131
Query: 494 NYIVHRDIKPENLLVEMSGCHVKVLKVGDFGLAQRVLRP---MFTVCGTPTYVAPEILNE 550
++HRDIKPENLL+ +G LK+ DFG + V P + GT Y+ PE++
Sbjct: 132 KRVIHRDIKPENLLLGSAG----ELKIADFGWS--VHAPSSRRXXLXGTLDYLPPEMIEG 185
Query: 551 SGYGVKIDVWAAGVILYILLCGFPPFVSDTNDQDELFDDILSGQYGFPSPYWDDISEEAK 610
+ K+D+W+ GV+ Y L G PPF + N E + I ++ FP D ++E A+
Sbjct: 186 RMHDEKVDLWSLGVLCYEFLVGKPPF--EANTYQETYKRISRVEFTFP----DFVTEGAR 239
Query: 611 ELISHMLESNPDLRFSAEDVLDHPWL 636
+LIS +L+ NP R +VL+HPW+
Sbjct: 240 DLISRLLKHNPSQRPMLREVLEHPWI 265
>pdb|3QBN|A Chain A, Structure Of Human Aurora A In Complex With A
Diaminopyrimidine
Length = 281
Score = 157 bits (396), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 89/264 (33%), Positives = 142/264 (53%), Gaps = 13/264 (4%)
Query: 376 LQRYSVGQIIGDGNFAVVRQVYDKHKDMDCALKIIDKSKL--LGKKQMIENEVNILRSVN 433
L+ + +G+ +G G F V +K ALK++ K++L G + + EV I +
Sbjct: 8 LEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLR 67
Query: 434 HPNIIKLLDEYDTNNELYLVIELIKGGDLFDAISKNVKFSEEDSKFMTQSLASALSYLHD 493
HPNI++L + +YL++E G ++ + K KF E+ + LA+ALSY H
Sbjct: 68 HPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHS 127
Query: 494 NYIVHRDIKPENLLVEMSGCHVKVLKVGDFGLAQRVLRP-MFTVCGTPTYVAPEILNESG 552
++HRDIKPENLL+ +G LK+ DFG + T+ GT Y+ PE++
Sbjct: 128 KRVIHRDIKPENLLLGSAG----ELKIADFGWSCHAPSSRRTTLSGTLDYLPPEMIEGRM 183
Query: 553 YGVKIDVWAAGVILYILLCGFPPFVSDTNDQDELFDDILSGQYGFPSPYWDDISEEAKEL 612
+ K+D+W+ GV+ Y L G PPF + N E + I ++ FP D ++E A++L
Sbjct: 184 HDEKVDLWSLGVLCYEFLVGKPPF--EANTYQETYKRISRVEFTFP----DFVTEGARDL 237
Query: 613 ISHMLESNPDLRFSAEDVLDHPWL 636
IS +L+ NP R +VL+HPW+
Sbjct: 238 ISRLLKHNPSQRPMLREVLEHPWI 261
>pdb|1ZMV|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
pdb|1ZMV|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
Length = 327
Score = 157 bits (396), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 91/262 (34%), Positives = 145/262 (55%), Gaps = 14/262 (5%)
Query: 379 YSVGQIIGDGNFAVVRQVYDKHKDMDCALKIIDKSKLLGKK-QMIENEVNILRSVNHPNI 437
Y + + IG GNFA V+ + A++IIDK++L Q + EV I++ +NHPNI
Sbjct: 16 YRLLKTIGKGNFAKVKLARHILTGKEVAVRIIDKTQLNSSSLQKLFREVRIMKVLNHPNI 75
Query: 438 IKLLDEYDTNNELYLVIELIKGGDLFDAISKNVKFSEEDSKFMTQSLASALSYLHDNYIV 497
+KL + +T LYLV+E GG++FD + + + E++++ + + SA+ Y H +IV
Sbjct: 76 VKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFRQIVSAVQYCHQKFIV 135
Query: 498 HRDIKPENLLVEMSGCHVKVLKVGDFGLAQRVL--RPMFTVCGTPTYVAPEILNESGY-G 554
HRD+K ENLL++ +K+ DFG + + T CG+P Y APE+ Y G
Sbjct: 136 HRDLKAENLLLDADMN----IKIADFGFSNEFTFGNKLDTFCGSPPYAAPELFQGKKYDG 191
Query: 555 VKIDVWAAGVILYILLCGFPPFVSDTNDQDELFDDILSGQYGFPSPYWDDISEEAKELIS 614
++DVW+ GVILY L+ G PF D + EL + +L G+Y P +S + + L+
Sbjct: 192 PEVDVWSLGVILYTLVSGSLPF--DGQNLKELRERVLRGKYRIPFY----MSTDCENLLK 245
Query: 615 HMLESNPDLRFSAEDVLDHPWL 636
L NP R + E ++ W+
Sbjct: 246 KFLILNPSKRGTLEQIMKDRWM 267
>pdb|3DAJ|A Chain A, Crystal Structure Of Aurora A Complexed With An Inhibitor
Discovered Through Site-Directed Dynamic Tethering
Length = 272
Score = 156 bits (395), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 89/267 (33%), Positives = 146/267 (54%), Gaps = 17/267 (6%)
Query: 376 LQRYSVGQIIGDGNFAVVRQVYDKHKDMDCALKIIDKSKL--LGKKQMIENEVNILRSVN 433
L+ + +G+ +G G F V ++ ALK++ K++L G + + EV I +
Sbjct: 11 LEDFDIGRPLGKGKFGNVYLARERQSKFILALKVLFKTQLEKAGVEHQLRREVEIQSHLR 70
Query: 434 HPNIIKLLDEYDTNNELYLVIELIKGGDLFDAISKNVKFSEEDSKFMTQSLASALSYLHD 493
HPNI++L + +YL++E G ++ + K +F E+ + LA+ALSY H
Sbjct: 71 HPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSRFDEQRTATYITELANALSYCHS 130
Query: 494 NYIVHRDIKPENLLVEMSGCHVKVLKVGDFGLAQRVLRPMF---TVCGTPTYVAPEILNE 550
++HRDIKPENLL+ +G LK+ DFG + V P T+CGT Y+ PE++
Sbjct: 131 KRVIHRDIKPENLLLGSNG----ELKIADFGWS--VHAPSSRRDTLCGTLDYLPPEMIEG 184
Query: 551 SGYGVKIDVWAAGVILYILLCGFPPFVSDTNDQDELFDDILSGQYGFPSPYWDDISEEAK 610
+ K+D+W+ GV+ Y L G PPF + T E + I ++ FP D ++E A+
Sbjct: 185 RMHDEKVDLWSLGVLCYEFLVGMPPFEAHT--YQETYRRISRVEFTFP----DFVTEGAR 238
Query: 611 ELISHMLESNPDLRFSAEDVLDHPWLE 637
+LIS +L+ N R + +VL+HPW++
Sbjct: 239 DLISRLLKHNASQRLTLAEVLEHPWIK 265
>pdb|2AC5|A Chain A, Structure Of Human Mnk2 Kinase Domain Mutant D228g
pdb|2HW7|A Chain A, Crystal Structure Of Mnk2-D228g In Complex With
Staurosporine
Length = 316
Score = 155 bits (393), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 95/282 (33%), Positives = 148/282 (52%), Gaps = 29/282 (10%)
Query: 384 IIGDGNFAVVRQVYDKHKDMDCALKIIDKSKLLGKKQMIENEVNILRSVNHPNIIKLLDE 443
++G+G A V+ + + A+KII+K + ++ + + H N+++L++
Sbjct: 20 VLGEGAHARVQTCINLITSQEYAVKIIEKQPGHIRSRVFREVEMLYQCQGHRNVLELIEF 79
Query: 444 YDTNNELYLVIELIKGGDLFDAISKNVKFSEEDSKFMTQSLASALSYLHDNYIVHRDIKP 503
++ + YLV E ++GG + I K F+E ++ + Q +ASAL +LH+ I HRD+KP
Sbjct: 80 FEEEDRFYLVFEKMRGGSILSHIHKRRHFNELEASVVVQDVASALDFLHNKGIAHRDLKP 139
Query: 504 ENLLVEMSGCHVKVLKVGDFGLAQRV-----LRP-----MFTVCGTPTYVAPEIL----- 548
EN+L E V +K+ DFGL + P + T CG+ Y+APE++
Sbjct: 140 ENILCEHPN-QVSPVKICDFGLGSGIKLNGDCSPISTPELLTPCGSAEYMAPEVVEAFSE 198
Query: 549 NESGYGVKIDVWAAGVILYILLCGFPPFVSDTND-------------QDELFDDILSGQY 595
S Y + D+W+ GVILYILL G+PPFV Q+ LF+ I G+Y
Sbjct: 199 EASIYDKRCDLWSLGVILYILLSGYPPFVGRCGSDCGWDRGEACPACQNMLFESIQEGKY 258
Query: 596 GFPSPYWDDISEEAKELISHMLESNPDLRFSAEDVLDHPWLE 637
FP W IS AK+LIS +L + R SA VL HPW++
Sbjct: 259 EFPDKDWAHISCAAKDLISKLLVRDAKQRLSAAQVLQHPWVQ 300
>pdb|3IEC|A Chain A, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|B Chain B, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|C Chain C, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|D Chain D, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
Length = 319
Score = 155 bits (392), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 92/262 (35%), Positives = 144/262 (54%), Gaps = 14/262 (5%)
Query: 379 YSVGQIIGDGNFAVVRQVYDKHKDMDCALKIIDKSKLLGKK-QMIENEVNILRSVNHPNI 437
Y + + IG GNFA V+ + A+KIIDK++L Q + EV I++ +NHPNI
Sbjct: 9 YRLLKTIGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFREVRIMKVLNHPNI 68
Query: 438 IKLLDEYDTNNELYLVIELIKGGDLFDAISKNVKFSEEDSKFMTQSLASALSYLHDNYIV 497
+KL + +T LYLV+E GG++FD + + E++++ + + SA+ Y H +IV
Sbjct: 69 VKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGWMKEKEARAKFRQIVSAVQYCHQKFIV 128
Query: 498 HRDIKPENLLVEMSGCHVKVLKVGDFGLAQRVL--RPMFTVCGTPTYVAPEILNESGY-G 554
HRD+K ENLL++ +K+ DFG + + T CG+P Y APE+ Y G
Sbjct: 129 HRDLKAENLLLDADMN----IKIADFGFSNEFTFGNKLDTFCGSPPYAAPELFQGKKYDG 184
Query: 555 VKIDVWAAGVILYILLCGFPPFVSDTNDQDELFDDILSGQYGFPSPYWDDISEEAKELIS 614
++DVW+ GVILY L+ G PF D + EL + +L G+Y P +S + + L+
Sbjct: 185 PEVDVWSLGVILYTLVSGSLPF--DGQNLKELRERVLRGKYRIPFY----MSTDCENLLK 238
Query: 615 HMLESNPDLRFSAEDVLDHPWL 636
L NP R + E ++ W+
Sbjct: 239 KFLILNPSKRGTLEQIMKDRWM 260
>pdb|2H6D|A Chain A, Protein Kinase Domain Of The Human 5'-Amp-Activated
Protein Kinase Catalytic Subunit Alpha-2 (Ampk Alpha-2
Chain)
Length = 276
Score = 155 bits (392), Expect = 7e-38, Method: Compositional matrix adjust.
Identities = 91/271 (33%), Positives = 151/271 (55%), Gaps = 21/271 (7%)
Query: 376 LQRYSVGQIIGDGNFAVVRQVYDKHKDMDCALKIIDKSKL-----LGKKQMIENEVNILR 430
+ Y +G +G G F V+ + A+KI+++ K+ +GK I+ E+ L+
Sbjct: 10 IGHYVLGDTLGVGTFGKVKIGEHQLTGHKVAVKILNRQKIRSLDVVGK---IKREIQNLK 66
Query: 431 SVNHPNIIKLLDEYDTNNELYLVIELIKGGDLFDAISKNVKFSEEDSKFMTQSLASALSY 490
HP+IIKL T + ++V+E + GG+LFD I K+ + E +++ + Q + SA+ Y
Sbjct: 67 LFRHPHIIKLYQVISTPTDFFMVMEYVSGGELFDYICKHGRVEEMEARRLFQQILSAVDY 126
Query: 491 LHDNYIVHRDIKPENLLVEMSGCHVKVLKVGDFGLAQRVLRPMF--TVCGTPTYVAPEIL 548
H + +VHRD+KPEN+L++ H+ K+ DFGL+ + F T CG+P Y APE++
Sbjct: 127 CHRHMVVHRDLKPENVLLD---AHMNA-KIADFGLSNMMSDGEFLRTSCGSPNYAAPEVI 182
Query: 549 NESGY-GVKIDVWAAGVILYILLCGFPPFVSDTNDQDELFDDILSGQYGFPSPYWDDISE 607
+ Y G ++D+W+ GVILY LLCG PF D LF I G + P + ++
Sbjct: 183 SGRLYAGPEVDIWSCGVILYALLCGTLPF--DDEHVPTLFKKIRGGVFYIP----EYLNR 236
Query: 608 EAKELISHMLESNPDLRFSAEDVLDHPWLER 638
L+ HML+ +P R + +D+ +H W ++
Sbjct: 237 SVATLLMHMLQVDPLKRATIKDIREHEWFKQ 267
>pdb|1ZMW|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
pdb|1ZMW|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
Length = 327
Score = 155 bits (392), Expect = 7e-38, Method: Compositional matrix adjust.
Identities = 91/262 (34%), Positives = 143/262 (54%), Gaps = 14/262 (5%)
Query: 379 YSVGQIIGDGNFAVVRQVYDKHKDMDCALKIIDKSKLLGKK-QMIENEVNILRSVNHPNI 437
Y + + IG GNFA V+ + A+KIIDK++L Q + EV I++ +NHPNI
Sbjct: 16 YRLLKTIGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFREVRIMKVLNHPNI 75
Query: 438 IKLLDEYDTNNELYLVIELIKGGDLFDAISKNVKFSEEDSKFMTQSLASALSYLHDNYIV 497
+KL + +T LYLV+E GG++FD + + + E++++ + + SA+ Y H +IV
Sbjct: 76 VKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFRQIVSAVQYCHQKFIV 135
Query: 498 HRDIKPENLLVEMSGCHVKVLKVGDFGLAQRVL--RPMFTVCGTPTYVAPEILNESGY-G 554
HRD+K ENLL++ +K+ DFG + + CG P Y APE+ Y G
Sbjct: 136 HRDLKAENLLLDADMN----IKIADFGFSNEFTFGNKLDAFCGAPPYAAPELFQGKKYDG 191
Query: 555 VKIDVWAAGVILYILLCGFPPFVSDTNDQDELFDDILSGQYGFPSPYWDDISEEAKELIS 614
++DVW+ GVILY L+ G PF D + EL + +L G+Y P +S + + L+
Sbjct: 192 PEVDVWSLGVILYTLVSGSLPF--DGQNLKELRERVLRGKYRIPFY----MSTDCENLLK 245
Query: 615 HMLESNPDLRFSAEDVLDHPWL 636
L NP R + E ++ W+
Sbjct: 246 KFLILNPSKRGTLEQIMKDRWM 267
>pdb|2Y94|A Chain A, Structure Of An Active Form Of Mammalian Ampk
Length = 476
Score = 155 bits (391), Expect = 8e-38, Method: Compositional matrix adjust.
Identities = 91/268 (33%), Positives = 151/268 (56%), Gaps = 21/268 (7%)
Query: 379 YSVGQIIGDGNFAVVRQVYDKHKDMDCALKIIDKSKL-----LGKKQMIENEVNILRSVN 433
Y +G +G G F V+ + A+KI+++ K+ +GK I E+ L+
Sbjct: 18 YILGDTLGVGTFGKVKVGKHELTGHKVAVKILNRQKIRSLDVVGK---IRREIQNLKLFR 74
Query: 434 HPNIIKLLDEYDTNNELYLVIELIKGGDLFDAISKNVKFSEEDSKFMTQSLASALSYLHD 493
HP+IIKL T +++++V+E + GG+LFD I KN + E++S+ + Q + S + Y H
Sbjct: 75 HPHIIKLYQVISTPSDIFMVMEYVSGGELFDYICKNGRLDEKESRRLFQQILSGVDYCHR 134
Query: 494 NYIVHRDIKPENLLVEMSGCHVKVLKVGDFGLAQRVLRPMF--TVCGTPTYVAPEILNES 551
+ +VHRD+KPEN+L++ H+ K+ DFGL+ + F CG+P Y APE+++
Sbjct: 135 HMVVHRDLKPENVLLD---AHMNA-KIADFGLSNMMSDGEFLRXSCGSPNYAAPEVISGR 190
Query: 552 GY-GVKIDVWAAGVILYILLCGFPPFVSDTNDQDELFDDILSGQYGFPSPYWDDISEEAK 610
Y G ++D+W++GVILY LLCG PF D + LF I G + P ++
Sbjct: 191 LYAGPEVDIWSSGVILYALLCGTLPF--DDDHVPTLFKKICDGIFYTPQ----YLNPSVI 244
Query: 611 ELISHMLESNPDLRFSAEDVLDHPWLER 638
L+ HML+ +P R + +D+ +H W ++
Sbjct: 245 SLLKHMLQVDPMKRATIKDIREHEWFKQ 272
>pdb|1MRV|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
pdb|1MRY|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
Length = 339
Score = 154 bits (390), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 90/261 (34%), Positives = 147/261 (56%), Gaps = 20/261 (7%)
Query: 383 QIIGDGNFAVVRQVYDKHKDMDCALKIIDKSKLLGKKQMIEN--EVNILRSVNHPNIIKL 440
+++G G F V V +K A+KI+ K ++ K ++ E +L++ HP + L
Sbjct: 14 KLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTAL 73
Query: 441 LDEYDTNNELYLVIELIKGGDLFDAISKNVKFSEEDSKFMTQSLASALSYLHDNYIVHRD 500
+ T++ L V+E GG+LF +S+ F+EE ++F + SAL YLH +V+RD
Sbjct: 74 KYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARFYGAEIVSALEYLHSRDVVYRD 133
Query: 501 IKPENLLVEMSGCHVKVLKVGDFGLAQRVLR---PMFTVCGTPTYVAPEILNESGYGVKI 557
IK ENL+++ G H+K+ DFGL + + M T CGTP Y+APE+L ++ YG +
Sbjct: 134 IKLENLMLDKDG-HIKIT---DFGLCKEGISDGATMKTFCGTPEYLAPEVLEDNDYGRAV 189
Query: 558 DVWAAGVILYILLCGFPPFVSDTNDQDELFDDILSGQYGFPSPYWDDISEEAKELISHML 617
D W GV++Y ++CG PF + D + LF+ IL + FP +S EAK L++ +L
Sbjct: 190 DWWGLGVVMYEMMCGRLPFYN--QDHERLFELILMEEIRFPRT----LSPEAKSLLAGLL 243
Query: 618 ESNPDLRFS-----AEDVLDH 633
+ +P R A++V++H
Sbjct: 244 KKDPKQRLGGGPSDAKEVMEH 264
>pdb|2WZJ|A Chain A, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|B Chain B, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|C Chain C, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|D Chain D, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|E Chain E, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|F Chain F, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
Length = 327
Score = 154 bits (389), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 90/262 (34%), Positives = 144/262 (54%), Gaps = 14/262 (5%)
Query: 379 YSVGQIIGDGNFAVVRQVYDKHKDMDCALKIIDKSKLLGKK-QMIENEVNILRSVNHPNI 437
Y + + IG GNFA V+ + A++IIDK++L Q + EV I++ +NHPNI
Sbjct: 16 YRLLKTIGKGNFAKVKLARHILTGKEVAVRIIDKTQLNSSSLQKLFREVRIMKVLNHPNI 75
Query: 438 IKLLDEYDTNNELYLVIELIKGGDLFDAISKNVKFSEEDSKFMTQSLASALSYLHDNYIV 497
+KL + +T LYLV+E GG++FD + + + E++++ + + SA+ Y H +IV
Sbjct: 76 VKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFRQIVSAVQYCHQKFIV 135
Query: 498 HRDIKPENLLVEMSGCHVKVLKVGDFGLAQRVL--RPMFTVCGTPTYVAPEILNESGY-G 554
HRD+K ENLL++ +K+ DFG + + CG+P Y APE+ Y G
Sbjct: 136 HRDLKAENLLLDADMN----IKIADFGFSNEFTFGNKLDEFCGSPPYAAPELFQGKKYDG 191
Query: 555 VKIDVWAAGVILYILLCGFPPFVSDTNDQDELFDDILSGQYGFPSPYWDDISEEAKELIS 614
++DVW+ GVILY L+ G PF D + EL + +L G+Y P +S + + L+
Sbjct: 192 PEVDVWSLGVILYTLVSGSLPF--DGQNLKELRERVLRGKYRIPFY----MSTDCENLLK 245
Query: 615 HMLESNPDLRFSAEDVLDHPWL 636
L NP R + E ++ W+
Sbjct: 246 KFLILNPSKRGTLEQIMKDRWM 267
>pdb|2QNJ|A Chain A, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
pdb|2QNJ|B Chain B, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
Length = 328
Score = 154 bits (389), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 92/262 (35%), Positives = 147/262 (56%), Gaps = 14/262 (5%)
Query: 379 YSVGQIIGDGNFAVVRQVYDKHKDMDCALKIIDKSKLLGKK-QMIENEVNILRSVNHPNI 437
Y + + IG GNFA V+ + A+KIIDK++L Q + EV I++ +NHPNI
Sbjct: 14 YRLLKTIGKGNFAKVKLARHILTGREVAIKIIDKTQLNPTSLQKLFREVRIMKILNHPNI 73
Query: 438 IKLLDEYDTNNELYLVIELIKGGDLFDAISKNVKFSEEDSKFMTQSLASALSYLHDNYIV 497
+KL + +T LYL++E GG++FD + + + E++++ + + SA+ Y H IV
Sbjct: 74 VKLFEVIETEKTLYLIMEYASGGEVFDYLVAHGRMKEKEARSKFRQIVSAVQYCHQKRIV 133
Query: 498 HRDIKPENLLVEMSGCHVKVLKVGDFGLAQR--VLRPMFTVCGTPTYVAPEILNESGY-G 554
HRD+K ENLL++ +K+ DFG + V + T CG+P Y APE+ Y G
Sbjct: 134 HRDLKAENLLLDADMN----IKIADFGFSNEFTVGGKLDTFCGSPPYAAPELFQGKKYDG 189
Query: 555 VKIDVWAAGVILYILLCGFPPFVSDTNDQDELFDDILSGQYGFPSPYWDDISEEAKELIS 614
++DVW+ GVILY L+ G PF D + EL + +L G+Y P++ +S + + L+
Sbjct: 190 PEVDVWSLGVILYTLVSGSLPF--DGQNLKELRERVLRGKYRI--PFY--MSTDCENLLK 243
Query: 615 HMLESNPDLRFSAEDVLDHPWL 636
L NP R + E ++ W+
Sbjct: 244 RFLVLNPIKRGTLEQIMKDRWI 265
>pdb|1GZN|A Chain A, Structure Of Pkb Kinase Domain
Length = 335
Score = 154 bits (388), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 90/261 (34%), Positives = 147/261 (56%), Gaps = 20/261 (7%)
Query: 383 QIIGDGNFAVVRQVYDKHKDMDCALKIIDKSKLLGKKQMIEN--EVNILRSVNHPNIIKL 440
+++G G F V V +K A+KI+ K ++ K ++ E +L++ HP + L
Sbjct: 11 KLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTAL 70
Query: 441 LDEYDTNNELYLVIELIKGGDLFDAISKNVKFSEEDSKFMTQSLASALSYLHDNYIVHRD 500
+ T++ L V+E GG+LF +S+ F+EE ++F + SAL YLH +V+RD
Sbjct: 71 KYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARFYGAEIVSALEYLHSRDVVYRD 130
Query: 501 IKPENLLVEMSGCHVKVLKVGDFGLAQRVLR---PMFTVCGTPTYVAPEILNESGYGVKI 557
IK ENL+++ G H+K+ DFGL + + M T CGTP Y+APE+L ++ YG +
Sbjct: 131 IKLENLMLDKDG-HIKIT---DFGLCKEGISDGATMKTFCGTPEYLAPEVLEDNDYGRAV 186
Query: 558 DVWAAGVILYILLCGFPPFVSDTNDQDELFDDILSGQYGFPSPYWDDISEEAKELISHML 617
D W GV++Y ++CG PF + D + LF+ IL + FP +S EAK L++ +L
Sbjct: 187 DWWGLGVVMYEMMCGRLPFYN--QDHERLFELILMEEIRFPRT----LSPEAKSLLAGLL 240
Query: 618 ESNPDLRFS-----AEDVLDH 633
+ +P R A++V++H
Sbjct: 241 KKDPKQRLGGGPSDAKEVMEH 261
>pdb|1GZK|A Chain A, Molecular Mechanism For The Regulation Of Protein Kinase B
Akt By Hydrophobic Motif Phosphorylation
pdb|1GZO|A Chain A, Structure Of Protein Kinase B Unphosphorylated
Length = 315
Score = 154 bits (388), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 90/261 (34%), Positives = 147/261 (56%), Gaps = 20/261 (7%)
Query: 383 QIIGDGNFAVVRQVYDKHKDMDCALKIIDKSKLLGKKQMIEN--EVNILRSVNHPNIIKL 440
+++G G F V V +K A+KI+ K ++ K ++ E +L++ HP + L
Sbjct: 11 KLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTAL 70
Query: 441 LDEYDTNNELYLVIELIKGGDLFDAISKNVKFSEEDSKFMTQSLASALSYLHDNYIVHRD 500
+ T++ L V+E GG+LF +S+ F+EE ++F + SAL YLH +V+RD
Sbjct: 71 KYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARFYGAEIVSALEYLHSRDVVYRD 130
Query: 501 IKPENLLVEMSGCHVKVLKVGDFGLAQRVLR---PMFTVCGTPTYVAPEILNESGYGVKI 557
IK ENL+++ G H+K+ DFGL + + M T CGTP Y+APE+L ++ YG +
Sbjct: 131 IKLENLMLDKDG-HIKIT---DFGLCKEGISDGATMKTFCGTPEYLAPEVLEDNDYGRAV 186
Query: 558 DVWAAGVILYILLCGFPPFVSDTNDQDELFDDILSGQYGFPSPYWDDISEEAKELISHML 617
D W GV++Y ++CG PF + D + LF+ IL + FP +S EAK L++ +L
Sbjct: 187 DWWGLGVVMYEMMCGRLPFYN--QDHERLFELILMEEIRFPRT----LSPEAKSLLAGLL 240
Query: 618 ESNPDLRFS-----AEDVLDH 633
+ +P R A++V++H
Sbjct: 241 KKDPKQRLGGGPSDAKEVMEH 261
>pdb|2BFY|A Chain A, Complex Of Aurora-B With Incenp And Hesperidin.
pdb|2BFY|B Chain B, Complex Of Aurora-B With Incenp And Hesperidin
Length = 284
Score = 154 bits (388), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 87/264 (32%), Positives = 143/264 (54%), Gaps = 17/264 (6%)
Query: 379 YSVGQIIGDGNFAVVRQVYDKHKDMDCALKIIDKSKLL--GKKQMIENEVNILRSVNHPN 436
+ + + +G G F V +K ALK++ KS+L G + + E+ I + HPN
Sbjct: 16 FDIVRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLRHPN 75
Query: 437 IIKLLDEYDTNNELYLVIELIKGGDLFDAISKNVKFSEEDSKFMTQSLASALSYLHDNYI 496
I+++ + + +YL++E G+L+ + K+ +F E+ S + LA AL Y H+ +
Sbjct: 76 ILRMYNYFHDRKRIYLMLEFAPRGELYKELQKHGRFDEQRSATFMEELADALHYCHERKV 135
Query: 497 VHRDIKPENLLVEMSGCHVKVLKVGDFGLAQRVLRPMF---TVCGTPTYVAPEILNESGY 553
+HRDIKPENLL+ G LK+ DFG + V P +CGT Y+ PE++ +
Sbjct: 136 IHRDIKPENLLMGYKG----ELKIADFGWS--VHAPSLRRRXMCGTLDYLPPEMIEGKTH 189
Query: 554 GVKIDVWAAGVILYILLCGFPPFVSDTNDQDELFDDILSGQYGFPSPYWDDISEEAKELI 613
K+D+W AGV+ Y L G PPF D+ E I++ FP P+ +S+ +K+LI
Sbjct: 190 DEKVDLWCAGVLCYEFLVGMPPF--DSPSHTETHRRIVNVDLKFP-PF---LSDGSKDLI 243
Query: 614 SHMLESNPDLRFSAEDVLDHPWLE 637
S +L +P R + V++HPW++
Sbjct: 244 SKLLRYHPPQRLPLKGVMEHPWVK 267
>pdb|3UC4|A Chain A, The Crystal Structure Of Snf1-Related Kinase 2.6
pdb|3UC4|B Chain B, The Crystal Structure Of Snf1-Related Kinase 2.6
Length = 362
Score = 153 bits (386), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 93/265 (35%), Positives = 147/265 (55%), Gaps = 13/265 (4%)
Query: 378 RYSVGQIIGDGNFAVVRQVYDKHKDMDCALKIIDKSKLLGKKQMIENEVNILRSVNHPNI 437
RY + + IG GNF V R + DK + A+K I++ + + ++ E+ RS+ HPNI
Sbjct: 20 RYELVKDIGSGNFGVARLMRDKQSNELVAVKYIERGEKIAAN--VKREIINHRSLRHPNI 77
Query: 438 IKLLDEYDTNNELYLVIELIKGGDLFDAISKNVKFSEEDSKFMTQSLASALSYLHDNYIV 497
++ + T L +V+E GG+LF+ I +FSE++++F Q L S +SY H +
Sbjct: 78 VRFKEVILTPTHLAIVMEYASGGELFERICNAGRFSEDEARFFFQQLISGVSYCHAMQVC 137
Query: 498 HRDIKPENLLVEMSGCHVKVLKVGDFGLAQRVL---RPMFTVCGTPTYVAPEILNESGYG 554
HRD+K EN L++ G LK+ DFG ++ + +P TV GTP Y+APE+L + Y
Sbjct: 138 HRDLKLENTLLD--GSPAPRLKICDFGYSKSSVLHSQPKSTV-GTPAYIAPEVLLKKEYD 194
Query: 555 VKI-DVWAAGVILYILLCGFPPFVSDTNDQD--ELFDDILSGQYGFPSPYWDDISEEAKE 611
K+ DVW+ GV LY++L G PF ++ + IL+ QY P + IS E +
Sbjct: 195 GKVADVWSCGVTLYVMLVGAYPFEDPEEPKNFRKTIHRILNVQYAIPD--YVHISPECRH 252
Query: 612 LISHMLESNPDLRFSAEDVLDHPWL 636
LIS + ++P R S ++ +H W
Sbjct: 253 LISRIFVADPAKRISIPEIRNHEWF 277
>pdb|2YZA|A Chain A, Crystal Structure Of Kinase Domain Of Human
5'-Amp-Activated Protein Kinase Alpha-2 Subunit Mutant
(T172d)
pdb|3AQV|A Chain A, Human Amp-Activated Protein Kinase Alpha 2 Subunit Kinase
Domain (T172d) Complexed With Compound C
Length = 276
Score = 152 bits (385), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 90/271 (33%), Positives = 150/271 (55%), Gaps = 21/271 (7%)
Query: 376 LQRYSVGQIIGDGNFAVVRQVYDKHKDMDCALKIIDKSKL-----LGKKQMIENEVNILR 430
+ Y +G +G G F V+ + A+KI+++ K+ +GK I+ E+ L+
Sbjct: 10 IGHYVLGDTLGVGTFGKVKIGEHQLTGHKVAVKILNRQKIRSLDVVGK---IKREIQNLK 66
Query: 431 SVNHPNIIKLLDEYDTNNELYLVIELIKGGDLFDAISKNVKFSEEDSKFMTQSLASALSY 490
HP+IIKL T + ++V+E + GG+LFD I K+ + E +++ + Q + SA+ Y
Sbjct: 67 LFRHPHIIKLYQVISTPTDFFMVMEYVSGGELFDYICKHGRVEEMEARRLFQQILSAVDY 126
Query: 491 LHDNYIVHRDIKPENLLVEMSGCHVKVLKVGDFGLAQRVLRPMFT--VCGTPTYVAPEIL 548
H + +VHRD+KPEN+L++ H+ K+ DFGL+ + F CG+P Y APE++
Sbjct: 127 CHRHMVVHRDLKPENVLLD---AHMNA-KIADFGLSNMMSDGEFLRDSCGSPNYAAPEVI 182
Query: 549 NESGY-GVKIDVWAAGVILYILLCGFPPFVSDTNDQDELFDDILSGQYGFPSPYWDDISE 607
+ Y G ++D+W+ GVILY LLCG PF D LF I G + P + ++
Sbjct: 183 SGRLYAGPEVDIWSCGVILYALLCGTLPF--DDEHVPTLFKKIRGGVFYIP----EYLNR 236
Query: 608 EAKELISHMLESNPDLRFSAEDVLDHPWLER 638
L+ HML+ +P R + +D+ +H W ++
Sbjct: 237 SVATLLMHMLQVDPLKRATIKDIREHEWFKQ 267
>pdb|2HAK|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|C Chain C, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|D Chain D, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|E Chain E, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|F Chain F, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|G Chain G, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|H Chain H, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
Length = 328
Score = 152 bits (385), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 95/262 (36%), Positives = 149/262 (56%), Gaps = 14/262 (5%)
Query: 379 YSVGQIIGDGNFAVVRQVYDKHKDMDCALKIIDKSKLLGKK-QMIENEVNILRSVNHPNI 437
Y + + IG GNFA V+ + A+KIIDK++L Q + EV I++ +NHPNI
Sbjct: 17 YRLQKTIGKGNFAKVKLARHVLTGREVAVKIIDKTQLNPTSLQKLFREVRIMKILNHPNI 76
Query: 438 IKLLDEYDTNNELYLVIELIKGGDLFDAISKNVKFSEEDSKFMTQSLASALSYLHDNYIV 497
+KL + +T LYLV+E GG++FD + + + E++++ + + SA+ Y H YIV
Sbjct: 77 VKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFRQIVSAVQYCHQKYIV 136
Query: 498 HRDIKPENLLVEMSGCHVKVLKVGDFGLAQR--VLRPMFTVCGTPTYVAPEILNESGY-G 554
HRD+K ENLL++ +K+ DFG + V + T CG+P Y APE+ Y G
Sbjct: 137 HRDLKAENLLLDGDMN----IKIADFGFSNEFTVGNKLDTFCGSPPYAAPELFQGKKYDG 192
Query: 555 VKIDVWAAGVILYILLCGFPPFVSDTNDQDELFDDILSGQYGFPSPYWDDISEEAKELIS 614
++DVW+ GVILY L+ G PF D + EL + +L G+Y P++ +S + + L+
Sbjct: 193 PEVDVWSLGVILYTLVSGSLPF--DGQNLKELRERVLRGKYRI--PFY--MSTDCENLLK 246
Query: 615 HMLESNPDLRFSAEDVLDHPWL 636
+L NP R S E ++ W+
Sbjct: 247 KLLVLNPIKRGSLEQIMKDRWM 268
>pdb|3G51|A Chain A, Structural Diversity Of The Active Conformation Of The N-
Terminal Kinase Domain Of P90 Ribosomal S6 Kinase 2
Length = 325
Score = 152 bits (385), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 87/257 (33%), Positives = 148/257 (57%), Gaps = 17/257 (6%)
Query: 378 RYSVGQIIGDGNFA---VVRQVYDKHKDMDCALKIIDKSKLLGKKQM-IENEVNILRSVN 433
++ + +++G G+F +V+++ A+K++ K+ L + ++ + E +IL VN
Sbjct: 25 QFELLKVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRTKMERDILVEVN 84
Query: 434 HPNIIKLLDEYDTNNELYLVIELIKGGDLFDAISKNVKFSEEDSKFMTQSLASALSYLHD 493
HP I+KL + T +LYL+++ ++GGDLF +SK V F+EED KF LA AL +LH
Sbjct: 85 HPFIVKLHYAFQTEGKLYLILDFLRGGDLFTRLSKEVMFTEEDVKFYLAELALALDHLHS 144
Query: 494 NYIVHRDIKPENLLVEMSGCHVKVLKVGDFGLAQRVL---RPMFTVCGTPTYVAPEILNE 550
I++RD+KPEN+L++ G +K+ DFGL++ + + ++ CGT Y+APE++N
Sbjct: 145 LGIIYRDLKPENILLDEEGH----IKLTDFGLSKESIDHEKKAYSFCGTVEYMAPEVVNR 200
Query: 551 SGYGVKIDVWAAGVILYILLCGFPPFVSDTNDQDELFDDILSGQYGFPSPYWDDISEEAK 610
G+ D W+ GV+++ +L G PF D+ E IL + G P +S EA+
Sbjct: 201 RGHTQSADWWSFGVLMFEMLTGTLPF--QGKDRKETMTMILKAKLGMPQ----FLSPEAQ 254
Query: 611 ELISHMLESNPDLRFSA 627
L+ + + NP R A
Sbjct: 255 SLLRMLFKRNPANRLGA 271
>pdb|2AC3|A Chain A, Structure Of Human Mnk2 Kinase Domain
Length = 316
Score = 152 bits (385), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 94/282 (33%), Positives = 147/282 (52%), Gaps = 29/282 (10%)
Query: 384 IIGDGNFAVVRQVYDKHKDMDCALKIIDKSKLLGKKQMIENEVNILRSVNHPNIIKLLDE 443
++G+G A V+ + + A+KII+K + ++ + + H N+++L++
Sbjct: 20 VLGEGAHARVQTCINLITSQEYAVKIIEKQPGHIRSRVFREVEMLYQCQGHRNVLELIEF 79
Query: 444 YDTNNELYLVIELIKGGDLFDAISKNVKFSEEDSKFMTQSLASALSYLHDNYIVHRDIKP 503
++ + YLV E ++GG + I K F+E ++ + Q +ASAL +LH+ I HRD+KP
Sbjct: 80 FEEEDRFYLVFEKMRGGSILSHIHKRRHFNELEASVVVQDVASALDFLHNKGIAHRDLKP 139
Query: 504 ENLLVEMSGCHVKVLKVGDFGLAQRV-----LRP-----MFTVCGTPTYVAPEIL----- 548
EN+L E V +K+ DF L + P + T CG+ Y+APE++
Sbjct: 140 ENILCEHPN-QVSPVKICDFDLGSGIKLNGDCSPISTPELLTPCGSAEYMAPEVVEAFSE 198
Query: 549 NESGYGVKIDVWAAGVILYILLCGFPPFVSDTND-------------QDELFDDILSGQY 595
S Y + D+W+ GVILYILL G+PPFV Q+ LF+ I G+Y
Sbjct: 199 EASIYDKRCDLWSLGVILYILLSGYPPFVGRCGSDCGWDRGEACPACQNMLFESIQEGKY 258
Query: 596 GFPSPYWDDISEEAKELISHMLESNPDLRFSAEDVLDHPWLE 637
FP W IS AK+LIS +L + R SA VL HPW++
Sbjct: 259 EFPDKDWAHISCAAKDLISKLLVRDAKQRLSAAQVLQHPWVQ 300
>pdb|3UJG|A Chain A, Crystal Structure Of Snrk2.6 In Complex With Hab1
Length = 361
Score = 152 bits (384), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 93/265 (35%), Positives = 148/265 (55%), Gaps = 13/265 (4%)
Query: 378 RYSVGQIIGDGNFAVVRQVYDKHKDMDCALKIIDKSKLLGKKQMIENEVNILRSVNHPNI 437
RY + + IG GNF V R + DK + A+K I++ + + + ++ E+ RS+ HPNI
Sbjct: 19 RYELVKDIGSGNFGVARLMRDKQSNELVAVKYIERGEKIDEN--VKREIINHRSLRHPNI 76
Query: 438 IKLLDEYDTNNELYLVIELIKGGDLFDAISKNVKFSEEDSKFMTQSLASALSYLHDNYIV 497
++ + T L +V+E GG+LF+ I +FSE++++F Q L S +SY H +
Sbjct: 77 VRFKEVILTPTHLAIVMEYASGGELFERICNAGRFSEDEARFFFQQLISGVSYCHAMQVC 136
Query: 498 HRDIKPENLLVEMSGCHVKVLKVGDFGLAQRVL---RPMFTVCGTPTYVAPEILNESGYG 554
HRD+K EN L++ G LK+ DFG ++ + +P TV GTP Y+APE+L + Y
Sbjct: 137 HRDLKLENTLLD--GSPAPRLKICDFGYSKSSVLHSQPKSTV-GTPAYIAPEVLLKKEYD 193
Query: 555 VKI-DVWAAGVILYILLCGFPPFVSDTNDQD--ELFDDILSGQYGFPSPYWDDISEEAKE 611
K+ DVW+ GV LY++L G PF ++ + IL+ QY P + IS E +
Sbjct: 194 GKVADVWSCGVTLYVMLVGAYPFEDPEEPKNFRKTIHRILNVQYAIPD--YVHISPECRH 251
Query: 612 LISHMLESNPDLRFSAEDVLDHPWL 636
LIS + ++P R S ++ +H W
Sbjct: 252 LISRIFVADPAKRISIPEIRNHEWF 276
>pdb|3UBD|A Chain A, Structure Of N-Terminal Domain Of Rsk2 Kinase In Complex
With Flavonoid Glycoside Sl0101
Length = 304
Score = 152 bits (384), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 88/257 (34%), Positives = 149/257 (57%), Gaps = 17/257 (6%)
Query: 378 RYSVGQIIGDGNFA---VVRQVYDKHKDMDCALKIIDKSKLLGKKQM-IENEVNILRSVN 433
++ + +++G G+F +V+++ A+K++ K+ L + ++ + E +IL VN
Sbjct: 25 QFELLKVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRTKMERDILVEVN 84
Query: 434 HPNIIKLLDEYDTNNELYLVIELIKGGDLFDAISKNVKFSEEDSKFMTQSLASALSYLHD 493
HP I+KL + T +LYL+++ ++GGDLF +SK V F+EED KF LA AL +LH
Sbjct: 85 HPFIVKLHYAFQTEGKLYLILDFLRGGDLFTRLSKEVMFTEEDVKFYLAELALALDHLHS 144
Query: 494 NYIVHRDIKPENLLVEMSGCHVKVLKVGDFGLAQRVL---RPMFTVCGTPTYVAPEILNE 550
I++RD+KPEN+L++ G H+K+ DFGL++ + + ++ CGT Y+APE++N
Sbjct: 145 LGIIYRDLKPENILLDEEG-HIKLT---DFGLSKESIDHEKKAYSFCGTVEYMAPEVVNR 200
Query: 551 SGYGVKIDVWAAGVILYILLCGFPPFVSDTNDQDELFDDILSGQYGFPSPYWDDISEEAK 610
G+ D W+ GV+++ +L G PF D+ E IL + G P +S EA+
Sbjct: 201 RGHTQSADWWSFGVLMFEMLTGTLPF--QGKDRKETMTMILKAKLGMPQ----FLSPEAQ 254
Query: 611 ELISHMLESNPDLRFSA 627
L+ + + NP R A
Sbjct: 255 SLLRMLFKRNPANRLGA 271
>pdb|4EL9|A Chain A, Structure Of N-Terminal Kinase Domain Of Rsk2 With Afzelin
pdb|4GUE|A Chain A, Structure Of N-terminal Kinase Domain Of Rsk2 With
Flavonoid Glycoside Quercitrin
Length = 305
Score = 152 bits (384), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 88/257 (34%), Positives = 149/257 (57%), Gaps = 17/257 (6%)
Query: 378 RYSVGQIIGDGNFA---VVRQVYDKHKDMDCALKIIDKSKLLGKKQM-IENEVNILRSVN 433
++ + +++G G+F +V+++ A+K++ K+ L + ++ + E +IL VN
Sbjct: 26 QFELLKVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRTKMERDILVEVN 85
Query: 434 HPNIIKLLDEYDTNNELYLVIELIKGGDLFDAISKNVKFSEEDSKFMTQSLASALSYLHD 493
HP I+KL + T +LYL+++ ++GGDLF +SK V F+EED KF LA AL +LH
Sbjct: 86 HPFIVKLHYAFQTEGKLYLILDFLRGGDLFTRLSKEVMFTEEDVKFYLAELALALDHLHS 145
Query: 494 NYIVHRDIKPENLLVEMSGCHVKVLKVGDFGLAQRVL---RPMFTVCGTPTYVAPEILNE 550
I++RD+KPEN+L++ G H+K+ DFGL++ + + ++ CGT Y+APE++N
Sbjct: 146 LGIIYRDLKPENILLDEEG-HIKLT---DFGLSKESIDHEKKAYSFCGTVEYMAPEVVNR 201
Query: 551 SGYGVKIDVWAAGVILYILLCGFPPFVSDTNDQDELFDDILSGQYGFPSPYWDDISEEAK 610
G+ D W+ GV+++ +L G PF D+ E IL + G P +S EA+
Sbjct: 202 RGHTQSADWWSFGVLMFEMLTGTLPF--QGKDRKETMTMILKAKLGMPQ----FLSPEAQ 255
Query: 611 ELISHMLESNPDLRFSA 627
L+ + + NP R A
Sbjct: 256 SLLRMLFKRNPANRLGA 272
>pdb|3FE3|A Chain A, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
pdb|3FE3|B Chain B, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
Length = 328
Score = 152 bits (383), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 91/262 (34%), Positives = 145/262 (55%), Gaps = 14/262 (5%)
Query: 379 YSVGQIIGDGNFAVVRQVYDKHKDMDCALKIIDKSKLLGKK-QMIENEVNILRSVNHPNI 437
Y + + IG GNFA V+ + A+KIIDK++L Q + EV I++ +NHPNI
Sbjct: 17 YRLLKTIGKGNFAKVKLARHILTGREVAIKIIDKTQLNPTSLQKLFREVRIMKILNHPNI 76
Query: 438 IKLLDEYDTNNELYLVIELIKGGDLFDAISKNVKFSEEDSKFMTQSLASALSYLHDNYIV 497
+KL + +T LYL++E GG++FD + + + E++++ + + SA+ Y H IV
Sbjct: 77 VKLFEVIETEKTLYLIMEYASGGEVFDYLVAHGRMKEKEARSKFRQIVSAVQYCHQKRIV 136
Query: 498 HRDIKPENLLVEMSGCHVKVLKVGDFGLAQR--VLRPMFTVCGTPTYVAPEILNESGY-G 554
HRD+K ENLL++ +K+ DFG + V + CG P Y APE+ Y G
Sbjct: 137 HRDLKAENLLLDAD----MNIKIADFGFSNEFTVGGKLDAFCGAPPYAAPELFQGKKYDG 192
Query: 555 VKIDVWAAGVILYILLCGFPPFVSDTNDQDELFDDILSGQYGFPSPYWDDISEEAKELIS 614
++DVW+ GVILY L+ G PF D + EL + +L G+Y P++ +S + + L+
Sbjct: 193 PEVDVWSLGVILYTLVSGSLPF--DGQNLKELRERVLRGKYRI--PFY--MSTDCENLLK 246
Query: 615 HMLESNPDLRFSAEDVLDHPWL 636
L NP R + E ++ W+
Sbjct: 247 RFLVLNPIKRGTLEQIMKDRWI 268
>pdb|3UDB|A Chain A, Crystal Structure Of Snrk2.6
pdb|3UDB|B Chain B, Crystal Structure Of Snrk2.6
pdb|3UDB|C Chain C, Crystal Structure Of Snrk2.6
pdb|3UDB|D Chain D, Crystal Structure Of Snrk2.6
pdb|3UDB|E Chain E, Crystal Structure Of Snrk2.6
pdb|3UDB|F Chain F, Crystal Structure Of Snrk2.6
Length = 317
Score = 152 bits (383), Expect = 8e-37, Method: Compositional matrix adjust.
Identities = 92/265 (34%), Positives = 147/265 (55%), Gaps = 13/265 (4%)
Query: 378 RYSVGQIIGDGNFAVVRQVYDKHKDMDCALKIIDKSKLLGKKQMIENEVNILRSVNHPNI 437
RY + + IG GNF V R + DK + A+K I++ + + + ++ E+ RS+ HPNI
Sbjct: 20 RYELVKDIGAGNFGVARLMRDKQANELVAVKYIERGEKIDEN--VKREIINHRSLRHPNI 77
Query: 438 IKLLDEYDTNNELYLVIELIKGGDLFDAISKNVKFSEEDSKFMTQSLASALSYLHDNYIV 497
++ + T L +V+E GG+LF+ I +FSE++++F Q L S +SY H +
Sbjct: 78 VRFKEVILTPTHLAIVMEYASGGELFERICNAGRFSEDEARFFFQQLISGVSYAHAMQVA 137
Query: 498 HRDIKPENLLVEMSGCHVKVLKVGDFGLAQRVL---RPMFTVCGTPTYVAPEILNESGYG 554
HRD+K EN L++ G LK+ DFG ++ + +P V GTP Y+APE+L + Y
Sbjct: 138 HRDLKLENTLLD--GSPAPRLKIADFGYSKASVLHSQPKSAV-GTPAYIAPEVLLKKEYD 194
Query: 555 VKI-DVWAAGVILYILLCGFPPFVSDTNDQD--ELFDDILSGQYGFPSPYWDDISEEAKE 611
K+ DVW+ GV LY++L G PF ++ + IL+ QY P + IS E +
Sbjct: 195 GKVADVWSCGVTLYVMLVGAYPFEDPEEPKNFRKTIHRILNVQYAIPD--YVHISPECRH 252
Query: 612 LISHMLESNPDLRFSAEDVLDHPWL 636
LIS + ++P R S ++ +H W
Sbjct: 253 LISRIFVADPAKRISIPEIRNHEWF 277
>pdb|3E87|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E87|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3D0E|A Chain A, Crystal Structure Of Human Akt2 In Complex With Gsk690693
pdb|3D0E|B Chain B, Crystal Structure Of Human Akt2 In Complex With Gsk690693
Length = 335
Score = 151 bits (382), Expect = 9e-37, Method: Compositional matrix adjust.
Identities = 89/261 (34%), Positives = 146/261 (55%), Gaps = 20/261 (7%)
Query: 383 QIIGDGNFAVVRQVYDKHKDMDCALKIIDKSKLLGKKQMIEN--EVNILRSVNHPNIIKL 440
+++G G F V V +K A+KI+ K ++ K ++ E +L++ HP + L
Sbjct: 11 KLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTAL 70
Query: 441 LDEYDTNNELYLVIELIKGGDLFDAISKNVKFSEEDSKFMTQSLASALSYLHDNYIVHRD 500
+ T++ L V+E GG+LF +S+ F+EE ++F + SAL YLH +V+RD
Sbjct: 71 KYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARFYGAEIVSALEYLHSRDVVYRD 130
Query: 501 IKPENLLVEMSGCHVKVLKVGDFGLAQRVLR---PMFTVCGTPTYVAPEILNESGYGVKI 557
IK ENL+++ G H+K+ DFGL + + M CGTP Y+APE+L ++ YG +
Sbjct: 131 IKLENLMLDKDG-HIKIT---DFGLCKEGISDGATMKXFCGTPEYLAPEVLEDNDYGRAV 186
Query: 558 DVWAAGVILYILLCGFPPFVSDTNDQDELFDDILSGQYGFPSPYWDDISEEAKELISHML 617
D W GV++Y ++CG PF + D + LF+ IL + FP +S EAK L++ +L
Sbjct: 187 DWWGLGVVMYEMMCGRLPFYN--QDHERLFELILMEEIRFPRT----LSPEAKSLLAGLL 240
Query: 618 ESNPDLRFS-----AEDVLDH 633
+ +P R A++V++H
Sbjct: 241 KKDPKQRLGGGPSDAKEVMEH 261
>pdb|1O6K|A Chain A, Structure Of Activated Form Of Pkb Kinase Domain S474d
With Gsk3 Peptide And Amp-Pnp
Length = 336
Score = 151 bits (382), Expect = 9e-37, Method: Compositional matrix adjust.
Identities = 89/261 (34%), Positives = 146/261 (55%), Gaps = 20/261 (7%)
Query: 383 QIIGDGNFAVVRQVYDKHKDMDCALKIIDKSKLLGKKQMIEN--EVNILRSVNHPNIIKL 440
+++G G F V V +K A+KI+ K ++ K ++ E +L++ HP + L
Sbjct: 11 KLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTAL 70
Query: 441 LDEYDTNNELYLVIELIKGGDLFDAISKNVKFSEEDSKFMTQSLASALSYLHDNYIVHRD 500
+ T++ L V+E GG+LF +S+ F+EE ++F + SAL YLH +V+RD
Sbjct: 71 KYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARFYGAEIVSALEYLHSRDVVYRD 130
Query: 501 IKPENLLVEMSGCHVKVLKVGDFGLAQRVLR---PMFTVCGTPTYVAPEILNESGYGVKI 557
IK ENL+++ G H+K+ DFGL + + M CGTP Y+APE+L ++ YG +
Sbjct: 131 IKLENLMLDKDG-HIKIT---DFGLCKEGISDGATMKXFCGTPEYLAPEVLEDNDYGRAV 186
Query: 558 DVWAAGVILYILLCGFPPFVSDTNDQDELFDDILSGQYGFPSPYWDDISEEAKELISHML 617
D W GV++Y ++CG PF + D + LF+ IL + FP +S EAK L++ +L
Sbjct: 187 DWWGLGVVMYEMMCGRLPFYN--QDHERLFELILMEEIRFPRT----LSPEAKSLLAGLL 240
Query: 618 ESNPDLRFS-----AEDVLDH 633
+ +P R A++V++H
Sbjct: 241 KKDPKQRLGGGPSDAKEVMEH 261
>pdb|2JDO|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDR|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With The Inhibitor
A- 443654
pdb|2UW9|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|2X39|A Chain A, Structure Of
4-Amino-N-(4-Chlorobenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidine-4-Carboxamide Bound To Pkb
pdb|2XH5|A Chain A, Structure Of 4-(4-Tert-Butylbenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidin-4-Amine Bound To Pkb
Length = 342
Score = 151 bits (382), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 90/272 (33%), Positives = 149/272 (54%), Gaps = 20/272 (7%)
Query: 372 PSKLLQRYSVGQIIGDGNFAVVRQVYDKHKDMDCALKIIDKSKLLGKKQMIEN--EVNIL 429
P + + +++G G F V V +K A+KI+ K ++ K ++ E +L
Sbjct: 5 PKVTMNDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVL 64
Query: 430 RSVNHPNIIKLLDEYDTNNELYLVIELIKGGDLFDAISKNVKFSEEDSKFMTQSLASALS 489
++ HP + L + T++ L V+E GG+LF +S+ F+EE ++F + SAL
Sbjct: 65 QNTRHPFLTALKYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARFYGAEIVSALE 124
Query: 490 YLHDNYIVHRDIKPENLLVEMSGCHVKVLKVGDFGLAQRVLR---PMFTVCGTPTYVAPE 546
YLH +V+RDIK ENL+++ G H+K+ DFGL + + M CGTP Y+APE
Sbjct: 125 YLHSRDVVYRDIKLENLMLDKDG-HIKIT---DFGLCKEGISDGATMKXFCGTPEYLAPE 180
Query: 547 ILNESGYGVKIDVWAAGVILYILLCGFPPFVSDTNDQDELFDDILSGQYGFPSPYWDDIS 606
+L ++ YG +D W GV++Y ++CG PF + D + LF+ IL + FP +S
Sbjct: 181 VLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYN--QDHERLFELILMEEIRFPRT----LS 234
Query: 607 EEAKELISHMLESNPDLRFS-----AEDVLDH 633
EAK L++ +L+ +P R A++V++H
Sbjct: 235 PEAKSLLAGLLKKDPKQRLGGGPSDAKEVMEH 266
>pdb|1O6L|A Chain A, Crystal Structure Of An Activated Akt/protein Kinase B
(pkb-pif Chimera) Ternary Complex With Amp-pnp And Gsk3
Peptide
Length = 337
Score = 151 bits (381), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 89/261 (34%), Positives = 146/261 (55%), Gaps = 20/261 (7%)
Query: 383 QIIGDGNFAVVRQVYDKHKDMDCALKIIDKSKLLGKKQMIEN--EVNILRSVNHPNIIKL 440
+++G G F V V +K A+KI+ K ++ K ++ E +L++ HP + L
Sbjct: 11 KLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTAL 70
Query: 441 LDEYDTNNELYLVIELIKGGDLFDAISKNVKFSEEDSKFMTQSLASALSYLHDNYIVHRD 500
+ T++ L V+E GG+LF +S+ F+EE ++F + SAL YLH +V+RD
Sbjct: 71 KYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARFYGAEIVSALEYLHSRDVVYRD 130
Query: 501 IKPENLLVEMSGCHVKVLKVGDFGLAQRVLR---PMFTVCGTPTYVAPEILNESGYGVKI 557
IK ENL+++ G H+K+ DFGL + + M CGTP Y+APE+L ++ YG +
Sbjct: 131 IKLENLMLDKDG-HIKIT---DFGLCKEGISDGATMKXFCGTPEYLAPEVLEDNDYGRAV 186
Query: 558 DVWAAGVILYILLCGFPPFVSDTNDQDELFDDILSGQYGFPSPYWDDISEEAKELISHML 617
D W GV++Y ++CG PF + D + LF+ IL + FP +S EAK L++ +L
Sbjct: 187 DWWGLGVVMYEMMCGRLPFYN--QDHERLFELILMEEIRFPRT----LSPEAKSLLAGLL 240
Query: 618 ESNPDLRFS-----AEDVLDH 633
+ +P R A++V++H
Sbjct: 241 KKDPKQRLGGGPSDAKEVMEH 261
>pdb|2Z7Q|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk-1 Bound To Amp-Pcp
pdb|2Z7R|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Staurosporine
pdb|2Z7S|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Purvalnol A
Length = 321
Score = 151 bits (381), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 89/267 (33%), Positives = 150/267 (56%), Gaps = 22/267 (8%)
Query: 379 YSVGQIIGDGNFA---VVRQVYDKHKDMDCALKIIDKSKLLGKKQM-IENEVNILRSVNH 434
+ + +++G G+F +VR+V A+K++ K+ L + ++ + E +IL VNH
Sbjct: 30 FELLKVLGQGSFGKVFLVRKVTRPDSGHLYAMKVLKKATLKVRDRVRTKMERDILADVNH 89
Query: 435 PNIIKLLDEYDTNNELYLVIELIKGGDLFDAISKNVKFSEEDSKFMTQSLASALSYLHDN 494
P ++KL + T +LYL+++ ++GGDLF +SK V F+EED KF LA L +LH
Sbjct: 90 PFVVKLHYAFQTEGKLYLILDFLRGGDLFTRLSKEVMFTEEDVKFYLAELALGLDHLHSL 149
Query: 495 YIVHRDIKPENLLVEMSGCHVKVLKVGDFGLAQRVL---RPMFTVCGTPTYVAPEILNES 551
I++RD+KPEN+L++ G +K+ DFGL++ + + ++ CGT Y+APE++N
Sbjct: 150 GIIYRDLKPENILLDEEGH----IKLTDFGLSKEAIDHEKKAYSFCGTVEYMAPEVVNRQ 205
Query: 552 GYGVKIDVWAAGVILYILLCGFPPFVSDTNDQDELFDDILSGQYGFPSPYWDDISEEAKE 611
G+ D W+ GV+++ +L G PF D+ E IL + G P +S EA+
Sbjct: 206 GHSHSADWWSYGVLMFEMLTGSLPF--QGKDRKETMTLILKAKLGMPQ----FLSTEAQS 259
Query: 612 LISHMLESNPDLRF-----SAEDVLDH 633
L+ + + NP R AE++ H
Sbjct: 260 LLRALFKRNPANRLGSGPDGAEEIKRH 286
>pdb|3O96|A Chain A, Crystal Structure Of Human Akt1 With An Allosteric
Inhibitor
Length = 446
Score = 150 bits (378), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 101/335 (30%), Positives = 174/335 (51%), Gaps = 40/335 (11%)
Query: 312 EEVKAIQALKKDLRRPEHTKL--KSGTTCLDASGREVPKMPTKTSVARCATATIKRRENL 369
E AIQ + L++ E ++ +SG+ ++ E+ + A K R +
Sbjct: 101 EWTTAIQTVADGLKKQEEEEMDFRSGSPSDNSGAEEM----------EVSLAKPKHRVTM 150
Query: 370 NIPSKLLQRYSVGQIIGDGNFAVVRQVYDKHKDMDCALKIIDKSKLLGKKQMIEN--EVN 427
N + +++G G F V V +K A+KI+ K ++ K ++ E
Sbjct: 151 N-------EFEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENR 203
Query: 428 ILRSVNHPNIIKLLDEYDTNNELYLVIELIKGGDLFDAISKNVKFSEEDSKFMTQSLASA 487
+L++ HP + L + T++ L V+E GG+LF +S+ FSE+ ++F + SA
Sbjct: 204 VLQNSRHPFLTALKYSFQTHDRLCFVMEYANGGELFFHLSRERVFSEDRARFYGAEIVSA 263
Query: 488 LSYLH-DNYIVHRDIKPENLLVEMSGCHVKVLKVGDFGLAQRVLR---PMFTVCGTPTYV 543
L YLH + +V+RD+K ENL+++ G H+K+ DFGL + ++ M T CGTP Y+
Sbjct: 264 LDYLHSEKNVVYRDLKLENLMLDKDG-HIKIT---DFGLCKEGIKDGATMKTFCGTPEYL 319
Query: 544 APEILNESGYGVKIDVWAAGVILYILLCGFPPFVSDTNDQDELFDDILSGQYGFPSPYWD 603
APE+L ++ YG +D W GV++Y ++CG PF + D ++LF+ IL + FP
Sbjct: 320 APEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYN--QDHEKLFELILMEEIRFPR---- 373
Query: 604 DISEEAKELISHMLESNPDLRFS-----AEDVLDH 633
+ EAK L+S +L+ +P R A++++ H
Sbjct: 374 TLGPEAKSLLSGLLKKDPKQRLGGGSEDAKEIMQH 408
>pdb|1Y8G|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
pdb|1Y8G|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
Length = 327
Score = 149 bits (377), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 91/261 (34%), Positives = 138/261 (52%), Gaps = 14/261 (5%)
Query: 379 YSVGQIIGDGNFAVVRQVYDKHKDMDCALKIIDKSKLLGKK-QMIENEVNILRSVNHPNI 437
Y + + IG GNFA V+ + A+KIIDK++L Q + EV I + +NHPNI
Sbjct: 16 YRLLKTIGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFREVRIXKVLNHPNI 75
Query: 438 IKLLDEYDTNNELYLVIELIKGGDLFDAISKNVKFSEEDSKFMTQSLASALSYLHDNYIV 497
+KL + +T LYLV E GG++FD + + + E++++ + + SA+ Y H +IV
Sbjct: 76 VKLFEVIETEKTLYLVXEYASGGEVFDYLVAHGRXKEKEARAKFRQIVSAVQYCHQKFIV 135
Query: 498 HRDIKPENLLVEMSGCHVKVLKVGDFGLAQRVL--RPMFTVCGTPTYVAPEILNESGY-G 554
HRD+K ENLL++ +K+ DFG + + CG P Y APE+ Y G
Sbjct: 136 HRDLKAENLLLDADXN----IKIADFGFSNEFTFGNKLDAFCGAPPYAAPELFQGKKYDG 191
Query: 555 VKIDVWAAGVILYILLCGFPPFVSDTNDQDELFDDILSGQYGFPSPYWDDISEEAKELIS 614
++DVW+ GVILY L+ G PF D + EL + +L G+Y P S + + L+
Sbjct: 192 PEVDVWSLGVILYTLVSGSLPF--DGQNLKELRERVLRGKYRIPFY----XSTDCENLLK 245
Query: 615 HMLESNPDLRFSAEDVLDHPW 635
L NP R + E + W
Sbjct: 246 KFLILNPSKRGTLEQIXKDRW 266
>pdb|3ZUT|A Chain A, The Structure Of Ost1 (D160a) Kinase
pdb|3ZUT|B Chain B, The Structure Of Ost1 (D160a) Kinase
Length = 362
Score = 149 bits (377), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 92/265 (34%), Positives = 147/265 (55%), Gaps = 13/265 (4%)
Query: 378 RYSVGQIIGDGNFAVVRQVYDKHKDMDCALKIIDKSKLLGKKQMIENEVNILRSVNHPNI 437
RY + + IG GNF V R + DK + A+K I++ + + + ++ E+ RS+ HPNI
Sbjct: 20 RYELVKDIGSGNFGVARLMRDKQSNELVAVKYIERGEKIDEN--VKREIINHRSLRHPNI 77
Query: 438 IKLLDEYDTNNELYLVIELIKGGDLFDAISKNVKFSEEDSKFMTQSLASALSYLHDNYIV 497
++ + T L +V+E GG+LF+ I +FSE++++F Q L S +SY H +
Sbjct: 78 VRFKEVILTPTHLAIVMEYASGGELFERICNAGRFSEDEARFFFQQLISGVSYCHAMQVC 137
Query: 498 HRDIKPENLLVEMSGCHVKVLKVGDFGLAQRVL---RPMFTVCGTPTYVAPEILNESGYG 554
HRD+K EN L++ G LK+ FG ++ + +P TV GTP Y+APE+L + Y
Sbjct: 138 HRDLKLENTLLD--GSPAPRLKICAFGYSKSSVLHSQPKSTV-GTPAYIAPEVLLKKEYD 194
Query: 555 VKI-DVWAAGVILYILLCGFPPFVSDTNDQD--ELFDDILSGQYGFPSPYWDDISEEAKE 611
K+ DVW+ GV LY++L G PF ++ + IL+ QY P + IS E +
Sbjct: 195 GKVADVWSCGVTLYVMLVGAYPFEDPEEPKNFRKTIHRILNVQYAIPD--YVHISPECRH 252
Query: 612 LISHMLESNPDLRFSAEDVLDHPWL 636
LIS + ++P R S ++ +H W
Sbjct: 253 LISRIFVADPAKRISIPEIRNHEWF 277
>pdb|3UC3|A Chain A, The Crystal Structure Of Snf1-Related Kinase 2.3
Length = 361
Score = 149 bits (377), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 96/267 (35%), Positives = 143/267 (53%), Gaps = 17/267 (6%)
Query: 378 RYSVGQIIGDGNFAVVRQVYDKHKDMDCALKIIDKSKLLGKKQMIENEVNILRSVNHPNI 437
RY + IG GNF V R + DK A+K I++ + + ++ E+ RS+ HPNI
Sbjct: 21 RYDFVKDIGSGNFGVARLMRDKLTKELVAVKYIERGAAIDEN--VQREIINHRSLRHPNI 78
Query: 438 IKLLDEYDTNNELYLVIELIKGGDLFDAISKNVKFSEEDSKFMTQSLASALSYLHDNYIV 497
++ + T L +++E GG+L++ I +FSE++++F Q L S +SY H I
Sbjct: 79 VRFKEVILTPTHLAIIMEYASGGELYERICNAGRFSEDEARFFFQQLLSGVSYCHSMQIC 138
Query: 498 HRDIKPENLLVEMSGCHVKVLKVGDFGLAQRVL---RPMFTVCGTPTYVAPEILNESGYG 554
HRD+K EN L++ G LK+ DFG ++ + +P TV GTP Y+APE+L Y
Sbjct: 139 HRDLKLENTLLD--GSPAPRLKICDFGYSKSSVLHSQPKSTV-GTPAYIAPEVLLRQEYD 195
Query: 555 VKI-DVWAAGVILYILLCGFPPF--VSDTNDQDELFDDILSGQYGFPSPYWDD--ISEEA 609
KI DVW+ GV LY++L G PF + D + ILS +Y P DD IS E
Sbjct: 196 GKIADVWSCGVTLYVMLVGAYPFEDPEEPRDYRKTIQRILSVKYSIP----DDIRISPEC 251
Query: 610 KELISHMLESNPDLRFSAEDVLDHPWL 636
LIS + ++P R S ++ H W
Sbjct: 252 CHLISRIFVADPATRISIPEIKTHSWF 278
>pdb|3ZUU|A Chain A, The Structure Of Ost1 (D160a, S175d) Kinase In Complex
With Gold
pdb|3ZUU|B Chain B, The Structure Of Ost1 (D160a, S175d) Kinase In Complex
With Gold
Length = 362
Score = 149 bits (376), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 92/265 (34%), Positives = 147/265 (55%), Gaps = 13/265 (4%)
Query: 378 RYSVGQIIGDGNFAVVRQVYDKHKDMDCALKIIDKSKLLGKKQMIENEVNILRSVNHPNI 437
RY + + IG GNF V R + DK + A+K I++ + + + ++ E+ RS+ HPNI
Sbjct: 20 RYELVKDIGSGNFGVARLMRDKQSNELVAVKYIERGEKIDEN--VKREIINHRSLRHPNI 77
Query: 438 IKLLDEYDTNNELYLVIELIKGGDLFDAISKNVKFSEEDSKFMTQSLASALSYLHDNYIV 497
++ + T L +V+E GG+LF+ I +FSE++++F Q L S +SY H +
Sbjct: 78 VRFKEVILTPTHLAIVMEYASGGELFERICNAGRFSEDEARFFFQQLISGVSYCHAMQVC 137
Query: 498 HRDIKPENLLVEMSGCHVKVLKVGDFGLAQRVL---RPMFTVCGTPTYVAPEILNESGYG 554
HRD+K EN L++ G LK+ FG ++ + +P TV GTP Y+APE+L + Y
Sbjct: 138 HRDLKLENTLLD--GSPAPRLKICAFGYSKSSVLHSQPKDTV-GTPAYIAPEVLLKKEYD 194
Query: 555 VKI-DVWAAGVILYILLCGFPPFVSDTNDQD--ELFDDILSGQYGFPSPYWDDISEEAKE 611
K+ DVW+ GV LY++L G PF ++ + IL+ QY P + IS E +
Sbjct: 195 GKVADVWSCGVTLYVMLVGAYPFEDPEEPKNFRKTIHRILNVQYAIPD--YVHISPECRH 252
Query: 612 LISHMLESNPDLRFSAEDVLDHPWL 636
LIS + ++P R S ++ +H W
Sbjct: 253 LISRIFVADPAKRISIPEIRNHEWF 277
>pdb|4EJN|A Chain A, Crystal Structure Of Autoinhibited Form Of Akt1 In Complex
With N-(4-
(5-(3-Acetamidophenyl)-2-(2-Aminopyridin-3-Yl)-3h-
Imidazo[4,5- B]pyridin-3-Yl)benzyl)-3-Fluorobenzamide
Length = 446
Score = 149 bits (375), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 88/262 (33%), Positives = 148/262 (56%), Gaps = 21/262 (8%)
Query: 383 QIIGDGNFAVVRQVYDKHKDMDCALKIIDKSKLLGKKQMIEN--EVNILRSVNHPNIIKL 440
+++G G F V V +K A+KI+ K ++ K ++ E +L++ HP + L
Sbjct: 154 KLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHPFLTAL 213
Query: 441 LDEYDTNNELYLVIELIKGGDLFDAISKNVKFSEEDSKFMTQSLASALSYLH-DNYIVHR 499
+ T++ L V+E GG+LF +S+ FSE+ ++F + SAL YLH + +V+R
Sbjct: 214 KYSFQTHDRLCFVMEYANGGELFFHLSRERVFSEDRARFYGAEIVSALDYLHSEKNVVYR 273
Query: 500 DIKPENLLVEMSGCHVKVLKVGDFGLAQRVLR---PMFTVCGTPTYVAPEILNESGYGVK 556
D+K ENL+++ G H+K+ DFGL + ++ M T CGTP Y+APE+L ++ YG
Sbjct: 274 DLKLENLMLDKDG-HIKIT---DFGLCKEGIKDGATMKTFCGTPEYLAPEVLEDNDYGRA 329
Query: 557 IDVWAAGVILYILLCGFPPFVSDTNDQDELFDDILSGQYGFPSPYWDDISEEAKELISHM 616
+D W GV++Y ++CG PF + D ++LF+ IL + FP + EAK L+S +
Sbjct: 330 VDWWGLGVVMYEMMCGRLPFYN--QDHEKLFELILMEEIRFPR----TLGPEAKSLLSGL 383
Query: 617 LESNPDLRFS-----AEDVLDH 633
L+ +P R A++++ H
Sbjct: 384 LKKDPKQRLGGGSEDAKEIMQH 405
>pdb|3H4J|B Chain B, Crystal Structure Of Pombe Ampk Kdaid Fragment
pdb|3H4J|A Chain A, Crystal Structure Of Pombe Ampk Kdaid Fragment
Length = 336
Score = 148 bits (374), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 94/274 (34%), Positives = 151/274 (55%), Gaps = 18/274 (6%)
Query: 369 LNIPSKLLQRYSVGQIIGDGNFAVVRQVYDKHKDMDCALKIIDKSKLLGKKQM---IENE 425
+ I + + Y + + +G+G+F V+ ALK I + +LL K M +E E
Sbjct: 1 MAISKRHIGPYIIRETLGEGSFGKVKLATHYKTQQKVALKFISR-QLLKKSDMHMRVERE 59
Query: 426 VNILRSVNHPNIIKLLDEYDTNNELYLVIELIKGGDLFDAISKNVKFSEEDSKFMTQSLA 485
++ L+ + HP+IIKL D T ++ +VIE GG+LFD I + + +E++ + Q +
Sbjct: 60 ISYLKLLRHPHIIKLYDVITTPTDIVMVIEY-AGGELFDYIVEKKRMTEDEGRRFFQQII 118
Query: 486 SALSYLHDNYIVHRDIKPENLLVEMSGCHVKVLKVGDFGLAQRVLRPMF--TVCGTPTYV 543
A+ Y H + IVHRD+KPENLL++ +V K+ DFGL+ + F T CG+P Y
Sbjct: 119 CAIEYCHRHKIVHRDLKPENLLLD-DNLNV---KIADFGLSNIMTDGNFLKTSCGSPNYA 174
Query: 544 APEILNESGY-GVKIDVWAAGVILYILLCGFPPFVSDTNDQDELFDDILSGQYGFPSPYW 602
APE++N Y G ++DVW+ G++LY++L G PF D LF + S Y P
Sbjct: 175 APEVINGKLYAGPEVDVWSCGIVLYVMLVGRLPF--DDEFIPNLFKKVNSCVYVMP---- 228
Query: 603 DDISEEAKELISHMLESNPDLRFSAEDVLDHPWL 636
D +S A+ LI M+ ++P R + +++ PW
Sbjct: 229 DFLSPGAQSLIRRMIVADPMQRITIQEIRRDPWF 262
>pdb|3HKO|A Chain A, Crystal Structure Of A Cdpk Kinase Domain From
Cryptosporidium Parvum, Cgd7_40
Length = 345
Score = 147 bits (371), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 105/330 (31%), Positives = 165/330 (50%), Gaps = 61/330 (18%)
Query: 366 RENLNIPS----KLLQRYSVGQIIGDGNFAVVRQVYDKHKDMDCALKIIDKSKL--LGKK 419
RENL +L ++Y + IG G++ VVR + A+KI++K+K+ + K
Sbjct: 11 RENLYFQGGSLLELQKKYHLKGAIGQGSYGVVRVAIENQTRAIRAIKIMNKNKIRQINPK 70
Query: 420 --QMIENEVNILRSVNHPNIIKLLDEYDTNNELYLVIELIKGGDLFD------------- 464
+ I+ EV +++ ++HPNI +L + Y+ + LV+EL GG L D
Sbjct: 71 DVERIKTEVRLMKKLHHPNIARLYEVYEDEQYICLVMELCHGGHLLDKLNVFIDDSTGKC 130
Query: 465 ------------------AISKNVKFSEEDSKF---------MTQSLASALSYLHDNYIV 497
AI+ ++ E F + + + SAL YLH+ I
Sbjct: 131 AMDVVKTQICPCPECNEEAINGSIHGFRESLDFVQREKLISNIMRQIFSALHYLHNQGIC 190
Query: 498 HRDIKPENLLVEMSGCHVKVLKVGDFGLAQRVLR-------PMFTVCGTPTYVAPEILNE 550
HRDIKPEN L + +K+ DFGL++ + M T GTP +VAPE+LN
Sbjct: 191 HRDIKPENFLFSTNKSFE--IKLVDFGLSKEFYKLNNGEYYGMTTKAGTPYFVAPEVLNT 248
Query: 551 S--GYGVKIDVWAAGVILYILLCGFPPFVSDTNDQDELFDDILSGQYGFPSPYWDDISEE 608
+ YG K D W+AGV+L++LL G PF ND D + +L+ + F +P ++ +S
Sbjct: 249 TNESYGPKCDAWSAGVLLHLLLMGAVPF-PGVNDADTI-SQVLNKKLCFENPNYNVLSPL 306
Query: 609 AKELISHMLESNPDLRFSAEDVLDHPWLER 638
A++L+S++L N D RF A L HPW+ +
Sbjct: 307 ARDLLSNLLNRNVDERFDAMRALQHPWISQ 336
>pdb|2R5T|A Chain A, Crystal Structure Of Inactive Serum And Glucocorticoid-
Regulated Kinase 1 In Complex With Amp-Pnp
pdb|3HDM|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 1
pdb|3HDN|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 2
Length = 373
Score = 146 bits (369), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 88/253 (34%), Positives = 144/253 (56%), Gaps = 16/253 (6%)
Query: 383 QIIGDGNFAVVRQVYDKHKDMDCALKIIDKSKLLGKKQ--MIENEVNIL-RSVNHPNIIK 439
++IG G+F V K +++ A+K++ K +L KK+ I +E N+L ++V HP ++
Sbjct: 44 KVIGKGSFGKVLLARHKAEEVFYAVKVLQKKAILKKKEEKHIMSERNVLLKNVKHPFLVG 103
Query: 440 LLDEYDTNNELYLVIELIKGGDLFDAISKNVKFSEEDSKFMTQSLASALSYLHDNYIVHR 499
L + T ++LY V++ I GG+LF + + F E ++F +ASAL YLH IV+R
Sbjct: 104 LHFSFQTADKLYFVLDYINGGELFYHLQRERCFLEPRARFYAAEIASALGYLHSLNIVYR 163
Query: 500 DIKPENLLVEMSGCHVKVLKVGDFGLAQRVLR---PMFTVCGTPTYVAPEILNESGYGVK 556
D+KPEN+L++ G V + DFGL + + T CGTP Y+APE+L++ Y
Sbjct: 164 DLKPENILLDSQGHIV----LTDFGLCKENIEHNSTTSTFCGTPEYLAPEVLHKQPYDRT 219
Query: 557 IDVWAAGVILYILLCGFPPFVSDTNDQDELFDDILSGQYGFPSPYWDDISEEAKELISHM 616
+D W G +LY +L G PPF S + E++D+IL+ P +I+ A+ L+ +
Sbjct: 220 VDWWCLGAVLYEMLYGLPPFYS--RNTAEMYDNILNK----PLQLKPNITNSARHLLEGL 273
Query: 617 LESNPDLRFSAED 629
L+ + R A+D
Sbjct: 274 LQKDRTKRLGAKD 286
>pdb|1KOB|A Chain A, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein
Kinase Domain
pdb|1KOB|B Chain B, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein
Kinase Domain
Length = 387
Score = 146 bits (368), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 85/263 (32%), Positives = 140/263 (53%), Gaps = 10/263 (3%)
Query: 379 YSVGQIIGDGNFAVVRQVYDKHKDMDCALKIIDKSKLLGKKQMIENEVNILRSVNHPNII 438
Y + + +G G F VV + +K K I+ L K ++NE++I+ ++HP +I
Sbjct: 53 YDILEELGSGAFGVVHRCVEKATGRVFVAKFINTPYPLDK-YTVKNEISIMNQLHHPKLI 111
Query: 439 KLLDEYDTNNELYLVIELIKGGDLFDAI-SKNVKFSEEDSKFMTQSLASALSYLHDNYIV 497
L D ++ E+ L++E + GG+LFD I +++ K SE + + L ++H++ IV
Sbjct: 112 NLHDAFEDKYEMVLILEFLSGGELFDRIAAEDYKMSEAEVINYMRQACEGLKHMHEHSIV 171
Query: 498 HRDIKPENLLVEMSGCHVKVLKVGDFGLAQRVLRP---MFTVCGTPTYVAPEILNESGYG 554
H DIKPEN++ E +K+ DFGLA + L P + T + APEI++ G
Sbjct: 172 HLDIKPENIMCETKKA--SSVKIIDFGLATK-LNPDEIVKVTTATAEFAAPEIVDREPVG 228
Query: 555 VKIDVWAAGVILYILLCGFPPFVSDTNDQDELFDDILSGQYGFPSPYWDDISEEAKELIS 614
D+WA GV+ Y+LL G PF + D E ++ + F + +S EAK+ I
Sbjct: 229 FYTDMWAIGVLGYVLLSGLSPFAGE--DDLETLQNVKRCDWEFDEDAFSSVSPEAKDFIK 286
Query: 615 HMLESNPDLRFSAEDVLDHPWLE 637
++L+ P R + D L+HPWL+
Sbjct: 287 NLLQKEPRKRLTVHDALEHPWLK 309
>pdb|3CQU|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3CQW|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3MV5|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
pdb|3MVH|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
Length = 342
Score = 146 bits (368), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 88/273 (32%), Positives = 150/273 (54%), Gaps = 21/273 (7%)
Query: 372 PSKLLQRYSVGQIIGDGNFAVVRQVYDKHKDMDCALKIIDKSKLLGKKQMIEN--EVNIL 429
P + + +++G G F V V +K A+KI+ K ++ K ++ E +L
Sbjct: 5 PRVTMNEFEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVL 64
Query: 430 RSVNHPNIIKLLDEYDTNNELYLVIELIKGGDLFDAISKNVKFSEEDSKFMTQSLASALS 489
++ HP + L + T++ L V+E GG+LF +S+ FSE+ ++F + SAL
Sbjct: 65 QNSRHPFLTALKYSFQTHDRLCFVMEYANGGELFFHLSRERVFSEDRARFYGAEIVSALD 124
Query: 490 YLH-DNYIVHRDIKPENLLVEMSGCHVKVLKVGDFGLAQRVLR---PMFTVCGTPTYVAP 545
YLH + +V+RD+K ENL+++ G H+K+ DFGL + ++ M CGTP Y+AP
Sbjct: 125 YLHSEKNVVYRDLKLENLMLDKDG-HIKIT---DFGLCKEGIKDGATMKXFCGTPEYLAP 180
Query: 546 EILNESGYGVKIDVWAAGVILYILLCGFPPFVSDTNDQDELFDDILSGQYGFPSPYWDDI 605
E+L ++ YG +D W GV++Y ++CG PF + D ++LF+ IL + FP +
Sbjct: 181 EVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYN--QDHEKLFELILMEEIRFPRT----L 234
Query: 606 SEEAKELISHMLESNPDLRFS-----AEDVLDH 633
EAK L+S +L+ +P R A++++ H
Sbjct: 235 GPEAKSLLSGLLKKDPKQRLGGGSEDAKEIMQH 267
>pdb|4GV1|A Chain A, Pkb Alpha In Complex With Azd5363
Length = 340
Score = 145 bits (366), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 87/262 (33%), Positives = 147/262 (56%), Gaps = 21/262 (8%)
Query: 383 QIIGDGNFAVVRQVYDKHKDMDCALKIIDKSKLLGKKQMIEN--EVNILRSVNHPNIIKL 440
+++G G F V V +K A+KI+ K ++ K ++ E +L++ HP + L
Sbjct: 14 KLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHPFLTAL 73
Query: 441 LDEYDTNNELYLVIELIKGGDLFDAISKNVKFSEEDSKFMTQSLASALSYLH-DNYIVHR 499
+ T++ L V+E GG+LF +S+ FSE+ ++F + SAL YLH + +V+R
Sbjct: 74 KYSFQTHDRLCFVMEYANGGELFFHLSRERVFSEDRARFYGAEIVSALDYLHSEKNVVYR 133
Query: 500 DIKPENLLVEMSGCHVKVLKVGDFGLAQRVLR---PMFTVCGTPTYVAPEILNESGYGVK 556
D+K ENL+++ G H+K+ DFGL + ++ M CGTP Y+APE+L ++ YG
Sbjct: 134 DLKLENLMLDKDG-HIKIT---DFGLCKEGIKDGATMKXFCGTPEYLAPEVLEDNDYGRA 189
Query: 557 IDVWAAGVILYILLCGFPPFVSDTNDQDELFDDILSGQYGFPSPYWDDISEEAKELISHM 616
+D W GV++Y ++CG PF + D ++LF+ IL + FP + EAK L+S +
Sbjct: 190 VDWWGLGVVMYEMMCGRLPFYN--QDHEKLFELILMEEIRFPRT----LGPEAKSLLSGL 243
Query: 617 LESNPDLRFS-----AEDVLDH 633
L+ +P R A++++ H
Sbjct: 244 LKKDPKQRLGGGSEDAKEIMQH 265
>pdb|3OCB|A Chain A, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OCB|B Chain B, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OW4|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3OW4|B Chain B, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3QKK|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKL|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKM|A Chain A, Spirocyclic Sulfonamides As Akt Inhibitors
pdb|4EKK|A Chain A, Akt1 With Amp-Pnp
pdb|4EKK|B Chain B, Akt1 With Amp-Pnp
pdb|4EKL|A Chain A, Akt1 With Gdc0068
Length = 341
Score = 145 bits (366), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 87/262 (33%), Positives = 147/262 (56%), Gaps = 21/262 (8%)
Query: 383 QIIGDGNFAVVRQVYDKHKDMDCALKIIDKSKLLGKKQMIEN--EVNILRSVNHPNIIKL 440
+++G G F V V +K A+KI+ K ++ K ++ E +L++ HP + L
Sbjct: 15 KLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHPFLTAL 74
Query: 441 LDEYDTNNELYLVIELIKGGDLFDAISKNVKFSEEDSKFMTQSLASALSYLH-DNYIVHR 499
+ T++ L V+E GG+LF +S+ FSE+ ++F + SAL YLH + +V+R
Sbjct: 75 KYSFQTHDRLCFVMEYANGGELFFHLSRERVFSEDRARFYGAEIVSALDYLHSEKNVVYR 134
Query: 500 DIKPENLLVEMSGCHVKVLKVGDFGLAQRVLR---PMFTVCGTPTYVAPEILNESGYGVK 556
D+K ENL+++ G H+K+ DFGL + ++ M CGTP Y+APE+L ++ YG
Sbjct: 135 DLKLENLMLDKDG-HIKIT---DFGLCKEGIKDGATMKXFCGTPEYLAPEVLEDNDYGRA 190
Query: 557 IDVWAAGVILYILLCGFPPFVSDTNDQDELFDDILSGQYGFPSPYWDDISEEAKELISHM 616
+D W GV++Y ++CG PF + D ++LF+ IL + FP + EAK L+S +
Sbjct: 191 VDWWGLGVVMYEMMCGRLPFYN--QDHEKLFELILMEEIRFPRT----LGPEAKSLLSGL 244
Query: 617 LESNPDLRFS-----AEDVLDH 633
L+ +P R A++++ H
Sbjct: 245 LKKDPKQRLGGGSEDAKEIMQH 266
>pdb|3D5U|A Chain A, Crystal Structure Of A Wildtype Polo-Like Kinase 1 (Plk1)
Catalytic Domain
Length = 317
Score = 144 bits (363), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 83/279 (29%), Positives = 154/279 (55%), Gaps = 19/279 (6%)
Query: 360 TATIKRRENLNIPSKLLQRYSVGQIIGDGNFAVVRQVYDKHKDMDCALKIIDKSKLLG-- 417
+A +K ++ + + ++RY G+ +G G FA ++ D A K++ KS LL
Sbjct: 25 SAPLKEIPDVLVDPRTMKRYMRGRFLGKGGFAKCYEITDMDTKEVFAGKVVPKSMLLKPH 84
Query: 418 KKQMIENEVNILRSVNHPNIIKLLDEYDTNNELYLVIELIKGGDLFDAISKNVKFSEEDS 477
+K+ + E+ I +S+++P+++ ++ ++ +Y+V+E+ + L + + +E ++
Sbjct: 85 QKEKMSTEIAIHKSLDNPHVVGFHGFFEDDDFVYVVLEICRRRSLLELHKRRKAVTEPEA 144
Query: 478 KFMTQSLASALSYLHDNYIVHRDIKPENLLV--EMSGCHVKVLKVGDFGLAQRVL---RP 532
++ + + YLH+N ++HRD+K NL + +M +K+GDFGLA ++
Sbjct: 145 RYFMRQTIQGVQYLHNNRVIHRDLKLGNLFLNDDMD------VKIGDFGLATKIEFDGER 198
Query: 533 MFTVCGTPTYVAPEILNESGYGVKIDVWAAGVILYILLCGFPPFVSDTNDQDELFDDILS 592
T+CGTP Y+APE+L + G+ ++D+W+ G ILY LL G PPF +T+ E + I
Sbjct: 199 KKTLCGTPNYIAPEVLCKKGHSFEVDIWSLGCILYTLLVGKPPF--ETSCLKETYIRIKK 256
Query: 593 GQYGFPSPYWDDISEEAKELISHMLESNPDLRFSAEDVL 631
+Y P I+ A LI ML ++P LR S ++L
Sbjct: 257 NEYSVPR----HINPVASALIRRMLHADPTLRPSVAELL 291
>pdb|2ZV2|A Chain A, Crystal Structure Of Human CalciumCALMODULIN-Dependent
Protein Kinase Kinase 2, Beta, Camkk2 Kinase Domain In
Complex With Sto-609
Length = 298
Score = 143 bits (360), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 98/300 (32%), Positives = 153/300 (51%), Gaps = 50/300 (16%)
Query: 376 LQRYSVGQIIGDGNFAVVRQVYDKHKDMDCALKIIDKSKLL------------------- 416
L +Y++ IG G++ VV+ Y+++ + A+K++ K KL+
Sbjct: 12 LNQYTLKDEIGKGSYGVVKLAYNENDNTYYAMKVLSKKKLIRQAGFPRRPPPRGTRPAPG 71
Query: 417 ------GKKQMIENEVNILRSVNHPNIIKLLDEYDTNNE--LYLVIELIKGGDLFDAISK 468
G + + E+ IL+ ++HPN++KL++ D NE LY+V EL+ G + + +
Sbjct: 72 GCIQPRGPIEQVYQEIAILKKLDHPNVVKLVEVLDDPNEDHLYMVFELVNQGPVMEVPTL 131
Query: 469 NVKFSEEDSKFMTQSLASALSYLHDNYIVHRDIKPENLLVEMSGCHVKVLKVGDFGLAQR 528
SE+ ++F Q L + YLH I+HRDIKP NLLV G H+ K+ DFG++
Sbjct: 132 K-PLSEDQARFYFQDLIKGIEYLHYQKIIHRDIKPSNLLVGEDG-HI---KIADFGVSNE 186
Query: 529 VLRP---MFTVCGTPTYVAPEILNESG---YGVKIDVWAAGVILYILLCGFPPFVSDTND 582
+ GTP ++APE L+E+ G +DVWA GV LY + G PF+
Sbjct: 187 FKGSDALLSNTVGTPAFMAPESLSETRKIFSGKALDVWAMGVTLYCFVFGQCPFM----- 241
Query: 583 QDE----LFDDILSGQYGFPSPYWDDISEEAKELISHMLESNPDLRFSAEDVLDHPWLER 638
DE L I S FP DI+E+ K+LI+ ML+ NP+ R ++ HPW+ R
Sbjct: 242 -DERIMCLHSKIKSQALEFPD--QPDIAEDLKDLITRMLDKNPESRIVVPEIKLHPWVTR 298
>pdb|4AF3|A Chain A, Human Aurora B Kinase In Complex With Incenp And Vx-680
Length = 292
Score = 142 bits (358), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 86/263 (32%), Positives = 140/263 (53%), Gaps = 17/263 (6%)
Query: 379 YSVGQIIGDGNFAVVRQVYDKHKDMDCALKIIDKSKLL--GKKQMIENEVNILRSVNHPN 436
+ +G+ +G G F V +K ALK++ KS++ G + + E+ I ++HPN
Sbjct: 25 FEIGRPLGKGKFGNVYLAREKKSHFIVALKVLFKSQIEKEGVEHQLRREIEIQAHLHHPN 84
Query: 437 IIKLLDEYDTNNELYLVIELIKGGDLFDAISKNVKFSEEDSKFMTQSLASALSYLHDNYI 496
I++L + + +YL++E G+L+ + K+ F E+ + + + LA AL Y H +
Sbjct: 85 ILRLYNYFYDRRRIYLILEYAPRGELYKELQKSCTFDEQRTATIMEELADALMYCHGKKV 144
Query: 497 VHRDIKPENLLVEMSGCHVKVLKVGDFGLAQRVLRPMF---TVCGTPTYVAPEILNESGY 553
+HRDIKPENLL+ + LK+ DFG + V P T+CGT Y+ PE++ +
Sbjct: 145 IHRDIKPENLLLGLK----GELKIADFGWS--VHAPSLRRKTMCGTLDYLPPEMIEGRMH 198
Query: 554 GVKIDVWAAGVILYILLCGFPPFVSDTNDQDELFDDILSGQYGFPSPYWDDISEEAKELI 613
K+D+W GV+ Y LL G PPF S ++ +E + I+ FP+ + A++LI
Sbjct: 199 NEKVDLWCIGVLCYELLVGNPPFESASH--NETYRRIVKVDLKFPA----SVPTGAQDLI 252
Query: 614 SHMLESNPDLRFSAEDVLDHPWL 636
S +L NP R V HPW+
Sbjct: 253 SKLLRHNPSERLPLAQVSAHPWV 275
>pdb|3D5W|A Chain A, Crystal Structure Of A Phosphorylated Polo-Like Kinase 1
(Plk1) Catalytic Domain In Complex With Adp
Length = 317
Score = 142 bits (357), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 82/279 (29%), Positives = 153/279 (54%), Gaps = 19/279 (6%)
Query: 360 TATIKRRENLNIPSKLLQRYSVGQIIGDGNFAVVRQVYDKHKDMDCALKIIDKSKLLG-- 417
+A +K ++ + + ++RY G+ +G G FA ++ D A K++ KS LL
Sbjct: 25 SAPLKEIPDVLVDPRTMKRYMRGRFLGKGGFAKCYEITDMDTKEVFAGKVVPKSMLLKPH 84
Query: 418 KKQMIENEVNILRSVNHPNIIKLLDEYDTNNELYLVIELIKGGDLFDAISKNVKFSEEDS 477
+K+ + E+ I +S+++P+++ ++ ++ +Y+V+E+ + L + + +E ++
Sbjct: 85 QKEKMSTEIAIHKSLDNPHVVGFHGFFEDDDFVYVVLEICRRRSLLELHKRRKAVTEPEA 144
Query: 478 KFMTQSLASALSYLHDNYIVHRDIKPENLLV--EMSGCHVKVLKVGDFGLAQRVL---RP 532
++ + + YLH+N ++HRD+K NL + +M +K+GDFGLA ++
Sbjct: 145 RYFMRQTIQGVQYLHNNRVIHRDLKLGNLFLNDDMD------VKIGDFGLATKIEFDGER 198
Query: 533 MFTVCGTPTYVAPEILNESGYGVKIDVWAAGVILYILLCGFPPFVSDTNDQDELFDDILS 592
+CGTP Y+APE+L + G+ ++D+W+ G ILY LL G PPF +T+ E + I
Sbjct: 199 KKXLCGTPNYIAPEVLCKKGHSFEVDIWSLGCILYTLLVGKPPF--ETSCLKETYIRIKK 256
Query: 593 GQYGFPSPYWDDISEEAKELISHMLESNPDLRFSAEDVL 631
+Y P I+ A LI ML ++P LR S ++L
Sbjct: 257 NEYSVPR----HINPVASALIRRMLHADPTLRPSVAELL 291
>pdb|3TXO|A Chain A, Pkc Eta Kinase In Complex With A Naphthyridine
Length = 353
Score = 141 bits (356), Expect = 9e-34, Method: Compositional matrix adjust.
Identities = 88/268 (32%), Positives = 146/268 (54%), Gaps = 24/268 (8%)
Query: 383 QIIGDGNFAVVRQVYDKHKDMDCALKIIDKSKLLG----KKQMIENEVNILRSVNHPNII 438
+++G G+F V K A+K++ K +L + M E + L + NHP +
Sbjct: 29 RVLGKGSFGKVMLARVKETGDLYAVKVLKKDVILQDDDVECTMTEKRILSL-ARNHPFLT 87
Query: 439 KLLDEYDTNNELYLVIELIKGGDLFDAISKNVKFSEEDSKFMTQSLASALSYLHDNYIVH 498
+L + T + L+ V+E + GGDL I K+ +F E ++F + SAL +LHD I++
Sbjct: 88 QLFCCFQTPDRLFFVMEFVNGGDLMFHIQKSRRFDEARARFYAAEIISALMFLHDKGIIY 147
Query: 499 RDIKPENLLVEMSGCHVKVLKVGDFGLAQRVL---RPMFTVCGTPTYVAPEILNESGYGV 555
RD+K +N+L++ G H K+ DFG+ + + T CGTP Y+APEIL E YG
Sbjct: 148 RDLKLDNVLLDHEG-HC---KLADFGMCKEGICNGVTTATFCGTPDYIAPEILQEMLYGP 203
Query: 556 KIDVWAAGVILYILLCGFPPFVSDTNDQDELFDDILSGQYGFPSPYWDDISEEAKELISH 615
+D WA GV+LY +LCG PF + ++D+LF+ IL+ + +P+ W + E+A ++
Sbjct: 204 AVDWWAMGVLLYEMLCGHAPF--EAENEDDLFEAILNDEVVYPT--W--LHEDATGILKS 257
Query: 616 MLESNPDLRFSA------EDVLDHPWLE 637
+ NP +R + +L HP+ +
Sbjct: 258 FMTKNPTMRLGSLTQGGEHAILRHPFFK 285
>pdb|3D5V|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain.
pdb|3DB8|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 041
pdb|3DBC|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 257
pdb|3DBD|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 094
Length = 317
Score = 141 bits (356), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 82/279 (29%), Positives = 153/279 (54%), Gaps = 19/279 (6%)
Query: 360 TATIKRRENLNIPSKLLQRYSVGQIIGDGNFAVVRQVYDKHKDMDCALKIIDKSKLLG-- 417
+A +K ++ + + ++RY G+ +G G FA ++ D A K++ KS LL
Sbjct: 25 SAPLKEIPDVLVDPRTMKRYMRGRFLGKGGFAKCYEITDMDTKEVFAGKVVPKSMLLKPH 84
Query: 418 KKQMIENEVNILRSVNHPNIIKLLDEYDTNNELYLVIELIKGGDLFDAISKNVKFSEEDS 477
+K+ + E+ I +S+++P+++ ++ ++ +Y+V+E+ + L + + +E ++
Sbjct: 85 QKEKMSTEIAIHKSLDNPHVVGFHGFFEDDDFVYVVLEICRRRSLLELHKRRKAVTEPEA 144
Query: 478 KFMTQSLASALSYLHDNYIVHRDIKPENLLV--EMSGCHVKVLKVGDFGLAQRVL---RP 532
++ + + YLH+N ++HRD+K NL + +M +K+GDFGLA ++
Sbjct: 145 RYFMRQTIQGVQYLHNNRVIHRDLKLGNLFLNDDMD------VKIGDFGLATKIEFDGER 198
Query: 533 MFTVCGTPTYVAPEILNESGYGVKIDVWAAGVILYILLCGFPPFVSDTNDQDELFDDILS 592
+CGTP Y+APE+L + G+ ++D+W+ G ILY LL G PPF +T+ E + I
Sbjct: 199 KKDLCGTPNYIAPEVLCKKGHSFEVDIWSLGCILYTLLVGKPPF--ETSCLKETYIRIKK 256
Query: 593 GQYGFPSPYWDDISEEAKELISHMLESNPDLRFSAEDVL 631
+Y P I+ A LI ML ++P LR S ++L
Sbjct: 257 NEYSVPR----HINPVASALIRRMLHADPTLRPSVAELL 291
>pdb|3DB6|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 902
pdb|3D5X|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Wortmannin.
pdb|3DBE|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 557
pdb|3DBF|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 562
Length = 301
Score = 141 bits (355), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 82/279 (29%), Positives = 153/279 (54%), Gaps = 19/279 (6%)
Query: 360 TATIKRRENLNIPSKLLQRYSVGQIIGDGNFAVVRQVYDKHKDMDCALKIIDKSKLLG-- 417
+A +K ++ + + ++RY G+ +G G FA ++ D A K++ KS LL
Sbjct: 9 SAPLKEIPDVLVDPRTMKRYMRGRFLGKGGFAKCYEITDMDTKEVFAGKVVPKSMLLKPH 68
Query: 418 KKQMIENEVNILRSVNHPNIIKLLDEYDTNNELYLVIELIKGGDLFDAISKNVKFSEEDS 477
+K+ + E+ I +S+++P+++ ++ ++ +Y+V+E+ + L + + +E ++
Sbjct: 69 QKEKMSTEIAIHKSLDNPHVVGFHGFFEDDDFVYVVLEICRRRSLLELHKRRKAVTEPEA 128
Query: 478 KFMTQSLASALSYLHDNYIVHRDIKPENLLV--EMSGCHVKVLKVGDFGLAQRVL---RP 532
++ + + YLH+N ++HRD+K NL + +M +K+GDFGLA ++
Sbjct: 129 RYFMRQTIQGVQYLHNNRVIHRDLKLGNLFLNDDMD------VKIGDFGLATKIEFDGER 182
Query: 533 MFTVCGTPTYVAPEILNESGYGVKIDVWAAGVILYILLCGFPPFVSDTNDQDELFDDILS 592
+CGTP Y+APE+L + G+ ++D+W+ G ILY LL G PPF +T+ E + I
Sbjct: 183 KKDLCGTPNYIAPEVLCKKGHSFEVDIWSLGCILYTLLVGKPPF--ETSCLKETYIRIKK 240
Query: 593 GQYGFPSPYWDDISEEAKELISHMLESNPDLRFSAEDVL 631
+Y P I+ A LI ML ++P LR S ++L
Sbjct: 241 NEYSVPR----HINPVASALIRRMLHADPTLRPSVAELL 275
>pdb|3IS5|A Chain A, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|B Chain B, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|C Chain C, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|D Chain D, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|E Chain E, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|F Chain F, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
Length = 285
Score = 140 bits (354), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 82/280 (29%), Positives = 148/280 (52%), Gaps = 11/280 (3%)
Query: 366 RENLNIPSKLLQRYSVGQIIGDGNFAVVRQVYDKHKDMDCALKIIDKSKLLGKKQMIENE 425
RENL + + + +G G F V V ++ ++ +K I+K + + IE E
Sbjct: 11 RENLYFQGTIDDLFIFKRKLGSGAFGDVHLVEERSSGLERVIKTINKDRSQVPMEQIEAE 70
Query: 426 VNILRSVNHPNIIKLLDEYDTNNELYLVIELIKGGDLFDAI----SKNVKFSEEDSKFMT 481
+ +L+S++HPNIIK+ + ++ + +Y+V+E +GG+L + I ++ SE +
Sbjct: 71 IEVLKSLDHPNIIKIFEVFEDYHNMYIVMETCEGGELLERIVSAQARGKALSEGYVAELM 130
Query: 482 QSLASALSYLHDNYIVHRDIKPENLLVEMSGCHVKVLKVGDFGLAQRVLRPMFT--VCGT 539
+ + +AL+Y H ++VH+D+KPEN+L + + H + K+ DFGLA+ + GT
Sbjct: 131 KQMMNALAYFHSQHVVHKDLKPENILFQDTSPHSPI-KIIDFGLAELFKSDEHSTNAAGT 189
Query: 540 PTYVAPEILNESGYGVKIDVWAAGVILYILLCGFPPFVSDTNDQDELFDDILSGQYGFPS 599
Y+APE+ K D+W+AGV++Y LL G PF + ++ + Y
Sbjct: 190 ALYMAPEVFKRD-VTFKCDIWSAGVVMYFLLTGCLPFTGTSLEEVQQKATYKEPNYAVEC 248
Query: 600 PYWDDISEEAKELISHMLESNPDLRFSAEDVLDHPWLERS 639
++ +A +L+ ML +P+ R SA VL H W +++
Sbjct: 249 ---RPLTPQAVDLLKQMLTKDPERRPSAAQVLHHEWFKQA 285
>pdb|3A60|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A60|B Chain B, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A61|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form Ii)
Length = 327
Score = 140 bits (353), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 85/268 (31%), Positives = 145/268 (54%), Gaps = 24/268 (8%)
Query: 383 QIIGDGNFA---VVRQVYDKHKDMDCALKIIDKSKLLGKKQ---MIENEVNILRSVNHPN 436
+++G G + VR+V + A+K++ K+ ++ + + E NIL V HP
Sbjct: 23 RVLGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKAERNILEEVKHPF 82
Query: 437 IIKLLDEYDTNNELYLVIELIKGGDLFDAISKNVKFSEEDSKFMTQSLASALSYLHDNYI 496
I+ L+ + T +LYL++E + GG+LF + + F E+ + F ++ AL +LH I
Sbjct: 83 IVDLIYAFQTGGKLYLILEYLSGGELFMQLEREGIFMEDTACFYLAEISMALGHLHQKGI 142
Query: 497 VHRDIKPENLLVEMSGCHVKVLKVGDFGLAQRVLRP---MFTVCGTPTYVAPEILNESGY 553
++RD+KPEN+++ G HVK+ DFGL + + T CGT Y+APEIL SG+
Sbjct: 143 IYRDLKPENIMLNHQG-HVKLT---DFGLCKESIHDGTVTHTFCGTIEYMAPEILMRSGH 198
Query: 554 GVKIDVWAAGVILYILLCGFPPFVSDTNDQDELFDDILSGQYGFPSPYWDDISEEAKELI 613
+D W+ G ++Y +L G PPF + ++ + D IL + P PY +++EA++L+
Sbjct: 199 NRAVDWWSLGALMYDMLTGAPPFTGE--NRKKTIDKILKCKLNLP-PY---LTQEARDLL 252
Query: 614 SHMLESNPDLRFS-----AEDVLDHPWL 636
+L+ N R A +V HP+
Sbjct: 253 KKLLKRNAASRLGAGPGDAGEVQAHPFF 280
>pdb|4DC2|A Chain A, Structure Of Pkc In Complex With A Substrate Peptide From
Par-3
Length = 396
Score = 140 bits (353), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 91/295 (30%), Positives = 154/295 (52%), Gaps = 28/295 (9%)
Query: 362 TIKRRENLNIPSKL-LQRYSVGQIIGDGNFAVVRQVYDKHKDMDCALKIIDKSKLLGKKQ 420
+ RE+ S L LQ + + ++IG G++A V V K D A++++ K + +
Sbjct: 36 AMNTRESGKASSSLGLQDFDLLRVIGRGSYAKVLLVRLKKTDRIYAMRVVKKELVNDDED 95
Query: 421 M--IENEVNIL-RSVNHPNIIKLLDEYDTNNELYLVIELIKGGDLFDAISKNVKFSEEDS 477
+ ++ E ++ ++ NHP ++ L + T + L+ VIE + GGDL + + K EE +
Sbjct: 96 IDWVQTEKHVFEQASNHPFLVGLHSCFQTESRLFFVIEYVNGGDLMFHMQRQRKLPEEHA 155
Query: 478 KFMTQSLASALSYLHDNYIVHRDIKPENLLVEMSGCHVKVLKVGDFGLAQRVLRP---MF 534
+F + ++ AL+YLH+ I++RD+K +N+L++ G H+K+ D+G+ + LRP
Sbjct: 156 RFYSAEISLALNYLHERGIIYRDLKLDNVLLDSEG-HIKLT---DYGMCKEGLRPGDTTS 211
Query: 535 TVCGTPTYVAPEILNESGYGVKIDVWAAGVILYILLCGFPPF-------VSDTNDQDELF 587
T CGTP Y+APEIL YG +D WA GV+++ ++ G PF D N +D LF
Sbjct: 212 TFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLF 271
Query: 588 DDILSGQYGFPSPYWDDISEEAKELISHMLESNPDLRFSAE------DVLDHPWL 636
IL Q P +S +A ++ L +P R D+ HP+
Sbjct: 272 QVILEKQIRIPR----SLSVKAASVLKSFLNKDPKERLGCHPQTGFADIQGHPFF 322
>pdb|1ZRZ|A Chain A, Crystal Structure Of The Catalytic Domain Of Atypical
Protein Kinase C-Iota
Length = 364
Score = 139 bits (351), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 92/295 (31%), Positives = 154/295 (52%), Gaps = 28/295 (9%)
Query: 362 TIKRRENLNIPSKL-LQRYSVGQIIGDGNFAVVRQVYDKHKDMDCALKIIDKSKLLGKKQ 420
+ RE+ S L LQ + + ++IG G++A V V K D A+K++ K + +
Sbjct: 4 AMNTRESGKASSSLGLQDFDLLRVIGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDED 63
Query: 421 M--IENEVNIL-RSVNHPNIIKLLDEYDTNNELYLVIELIKGGDLFDAISKNVKFSEEDS 477
+ ++ E ++ ++ NHP ++ L + T + L+ VIE + GGDL + + K EE +
Sbjct: 64 IDWVQTEKHVFEQASNHPFLVGLHSCFQTESRLFFVIEYVNGGDLMFHMQRQRKLPEEHA 123
Query: 478 KFMTQSLASALSYLHDNYIVHRDIKPENLLVEMSGCHVKVLKVGDFGLAQRVLRPMFTV- 536
+F + ++ AL+YLH+ I++RD+K +N+L++ G H+K+ D+G+ + LRP T
Sbjct: 124 RFYSAEISLALNYLHERGIIYRDLKLDNVLLDSEG-HIKLT---DYGMCKEGLRPGDTTS 179
Query: 537 --CGTPTYVAPEILNESGYGVKIDVWAAGVILYILLCGFPPF-------VSDTNDQDELF 587
CGTP Y+APEIL YG +D WA GV+++ ++ G PF D N +D LF
Sbjct: 180 XFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLF 239
Query: 588 DDILSGQYGFPSPYWDDISEEAKELISHMLESNPDLRFSA------EDVLDHPWL 636
IL Q P +S +A ++ L +P R D+ HP+
Sbjct: 240 QVILEKQIRIPR----SMSVKAASVLKSFLNKDPKERLGCLPQTGFADIQGHPFF 290
>pdb|1KOA|A Chain A, Twitchin Kinase Fragment (C.Elegans), Autoregulated
Protein Kinase And Immunoglobulin Domains
Length = 491
Score = 139 bits (349), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 78/266 (29%), Positives = 141/266 (53%), Gaps = 10/266 (3%)
Query: 375 LLQRYSVGQIIGDGNFAVVRQVYDKHKDMDCALKIIDKSKLLGKKQMIENEVNILRSVNH 434
+L Y + + +G G F VV +V ++ + A K + + K+ + E+ + + H
Sbjct: 49 VLDHYDIHEELGTGAFGVVHRVTERATGNNFAAKFV-MTPHESDKETVRKEIQTMSVLRH 107
Query: 435 PNIIKLLDEYDTNNELYLVIELIKGGDLFDAIS-KNVKFSEEDSKFMTQSLASALSYLHD 493
P ++ L D ++ +NE+ ++ E + GG+LF+ ++ ++ K SE+++ + + L ++H+
Sbjct: 108 PTLVNLHDAFEDDNEMVMIYEFMSGGELFEKVADEHNKMSEDEAVEYMRQVCKGLCHMHE 167
Query: 494 NYIVHRDIKPENLLVEMSGCHVKVLKVGDFGLAQRVLRPMFTV---CGTPTYVAPEILNE 550
N VH D+KPEN++ + LK+ DFGL L P +V GT + APE+
Sbjct: 168 NNYVHLDLKPENIM--FTTKRSNELKLIDFGLTAH-LDPKQSVKVTTGTAEFAAPEVAEG 224
Query: 551 SGYGVKIDVWAAGVILYILLCGFPPFVSDTNDQDELFDDILSGQYGFPSPYWDDISEEAK 610
G D+W+ GV+ YILL G PF + + DE ++ S + + ISE+ K
Sbjct: 225 KPVGYYTDMWSVGVLSYILLSGLSPFGGEND--DETLRNVKSCDWNMDDSAFSGISEDGK 282
Query: 611 ELISHMLESNPDLRFSAEDVLDHPWL 636
+ I +L ++P+ R + L+HPWL
Sbjct: 283 DFIRKLLLADPNTRMTIHQALEHPWL 308
>pdb|3ZH8|A Chain A, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|B Chain B, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|C Chain C, A Novel Small Molecule Apkc Inhibitor
Length = 349
Score = 139 bits (349), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 88/280 (31%), Positives = 148/280 (52%), Gaps = 27/280 (9%)
Query: 376 LQRYSVGQIIGDGNFAVVRQVYDKHKDMDCALKIIDKSKLLGKKQM--IENEVNIL-RSV 432
LQ + + ++IG G++A V V K D A+K++ K + + + ++ E ++ ++
Sbjct: 4 LQDFDLLRVIGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKHVFEQAS 63
Query: 433 NHPNIIKLLDEYDTNNELYLVIELIKGGDLFDAISKNVKFSEEDSKFMTQSLASALSYLH 492
NHP ++ L + T + L+ VIE + GGDL + + K EE ++F + ++ AL+YLH
Sbjct: 64 NHPFLVGLHSCFQTESRLFFVIEYVNGGDLMFHMQRQRKLPEEHARFYSAEISLALNYLH 123
Query: 493 DNYIVHRDIKPENLLVEMSGCHVKVLKVGDFGLAQRVLRPMFTV---CGTPTYVAPEILN 549
+ I++RD+K +N+L++ G H+K+ D+G+ + LRP T CGTP Y+APEIL
Sbjct: 124 ERGIIYRDLKLDNVLLDSEG-HIKLT---DYGMCKEGLRPGDTTSXFCGTPNYIAPEILR 179
Query: 550 ESGYGVKIDVWAAGVILYILLCGFPPF-------VSDTNDQDELFDDILSGQYGFPSPYW 602
YG +D WA GV+++ ++ G PF D N +D LF IL Q P
Sbjct: 180 GEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVILEKQIRIPR--- 236
Query: 603 DDISEEAKELISHMLESNPDLRFSAE------DVLDHPWL 636
+S +A ++ L +P R D+ HP+
Sbjct: 237 -SLSVKAASVLKSFLNKDPKERLGCHPQTGFADIQGHPFF 275
>pdb|3A8W|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8W|B Chain B, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|B Chain B, Crystal Structure Of Pkciota Kinase Domain
Length = 345
Score = 139 bits (349), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 88/280 (31%), Positives = 148/280 (52%), Gaps = 27/280 (9%)
Query: 376 LQRYSVGQIIGDGNFAVVRQVYDKHKDMDCALKIIDKSKLLGKKQM--IENEVNIL-RSV 432
LQ + + ++IG G++A V V K D A+K++ K + + + ++ E ++ ++
Sbjct: 8 LQDFDLLRVIGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKHVFEQAS 67
Query: 433 NHPNIIKLLDEYDTNNELYLVIELIKGGDLFDAISKNVKFSEEDSKFMTQSLASALSYLH 492
NHP ++ L + T + L+ VIE + GGDL + + K EE ++F + ++ AL+YLH
Sbjct: 68 NHPFLVGLHSCFQTESRLFFVIEYVNGGDLMFHMQRQRKLPEEHARFYSAEISLALNYLH 127
Query: 493 DNYIVHRDIKPENLLVEMSGCHVKVLKVGDFGLAQRVLRPMFTV---CGTPTYVAPEILN 549
+ I++RD+K +N+L++ G H+K+ D+G+ + LRP T CGTP Y+APEIL
Sbjct: 128 ERGIIYRDLKLDNVLLDSEG-HIKLT---DYGMCKEGLRPGDTTSXFCGTPNYIAPEILR 183
Query: 550 ESGYGVKIDVWAAGVILYILLCGFPPF-------VSDTNDQDELFDDILSGQYGFPSPYW 602
YG +D WA GV+++ ++ G PF D N +D LF IL Q P
Sbjct: 184 GEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVILEKQIRIPR--- 240
Query: 603 DDISEEAKELISHMLESNPDLRFSAE------DVLDHPWL 636
+S +A ++ L +P R D+ HP+
Sbjct: 241 -SLSVKAASVLKSFLNKDPKERLGCHPQTGFADIQGHPFF 279
>pdb|3KGA|A Chain A, Crystal Structure Of Mapkap Kinase 2 (Mk2) Complexed With
A Potent 3-Aminopyrazole Atp Site Inhibitor
pdb|3M2W|A Chain A, Crystal Structure Of Mapkak Kinase 2 (Mk2) Complexed With
A Spiroazetidine-Tetracyclic Atp Site Inhibitor
pdb|3M42|A Chain A, Crystal Structure Of Mapkap Kinase 2 (Mk2) Complexed With
A Tetracyclic Atp Site Inhibitor
Length = 299
Score = 139 bits (349), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 87/265 (32%), Positives = 139/265 (52%), Gaps = 33/265 (12%)
Query: 383 QIIGDGNFAVVRQVYDKHKDMDCALKIIDKSKLLGKKQMIENEVNILRSVNHPNIIKLLD 442
Q++G G V Q+++K ALK++ K E E++ R+ P+I++++D
Sbjct: 24 QVLGLGINGKVLQIFNKRTQEKFALKMLQDCP----KARREVELH-WRASQCPHIVRIVD 78
Query: 443 EYDT----NNELYLVIELIKGGDLFDAIS--KNVKFSEEDSKFMTQSLASALSYLHDNYI 496
Y+ L +V+E + GG+LF I + F+E ++ + +S+ A+ YLH I
Sbjct: 79 VYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINI 138
Query: 497 VHRDIKPENLLVEMSGCHVKVLKVGDFGLAQRVLRPMFTVCGTPTYVAPEILNESGYGVK 556
HRD+KPENLL + +LK+ DFG A+ E E Y
Sbjct: 139 AHRDVKPENLLYTSKRPNA-ILKLTDFGFAK------------------ETTGEK-YDKS 178
Query: 557 IDVWAAGVILYILLCGFPPFVSDTN--DQDELFDDILSGQYGFPSPYWDDISEEAKELIS 614
D+W+ GVI+YILLCG+PPF S+ + I GQY FP+P W ++SEE K LI
Sbjct: 179 CDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQYEFPNPEWSEVSEEVKMLIR 238
Query: 615 HMLESNPDLRFSAEDVLDHPWLERS 639
++L++ P R + + ++HPW+ +S
Sbjct: 239 NLLKTEPTQRMTITEFMNHPWIMQS 263
>pdb|3A62|A Chain A, Crystal Structure Of Phosphorylated P70s6k1
Length = 327
Score = 138 bits (348), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 84/268 (31%), Positives = 144/268 (53%), Gaps = 24/268 (8%)
Query: 383 QIIGDGNFA---VVRQVYDKHKDMDCALKIIDKSKLLGKKQ---MIENEVNILRSVNHPN 436
+++G G + VR+V + A+K++ K+ ++ + + E NIL V HP
Sbjct: 23 RVLGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKAERNILEEVKHPF 82
Query: 437 IIKLLDEYDTNNELYLVIELIKGGDLFDAISKNVKFSEEDSKFMTQSLASALSYLHDNYI 496
I+ L+ + T +LYL++E + GG+LF + + F E+ + F ++ AL +LH I
Sbjct: 83 IVDLIYAFQTGGKLYLILEYLSGGELFMQLEREGIFMEDTACFYLAEISMALGHLHQKGI 142
Query: 497 VHRDIKPENLLVEMSGCHVKVLKVGDFGLAQRVLRP---MFTVCGTPTYVAPEILNESGY 553
++RD+KPEN+++ G HVK+ DFGL + + CGT Y+APEIL SG+
Sbjct: 143 IYRDLKPENIMLNHQG-HVKLT---DFGLCKESIHDGTVTHXFCGTIEYMAPEILMRSGH 198
Query: 554 GVKIDVWAAGVILYILLCGFPPFVSDTNDQDELFDDILSGQYGFPSPYWDDISEEAKELI 613
+D W+ G ++Y +L G PPF + ++ + D IL + P PY +++EA++L+
Sbjct: 199 NRAVDWWSLGALMYDMLTGAPPFTGE--NRKKTIDKILKCKLNLP-PY---LTQEARDLL 252
Query: 614 SHMLESNPDLRFS-----AEDVLDHPWL 636
+L+ N R A +V HP+
Sbjct: 253 KKLLKRNAASRLGAGPGDAGEVQAHPFF 280
>pdb|3UTO|A Chain A, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
pdb|3UTO|B Chain B, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
Length = 573
Score = 138 bits (348), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 78/266 (29%), Positives = 141/266 (53%), Gaps = 10/266 (3%)
Query: 375 LLQRYSVGQIIGDGNFAVVRQVYDKHKDMDCALKIIDKSKLLGKKQMIENEVNILRSVNH 434
+L Y + + +G G F VV +V ++ + A K + + K+ + E+ + + H
Sbjct: 155 VLDHYDIHEELGTGAFGVVHRVTERATGNNFAAKFV-MTPHESDKETVRKEIQTMSVLRH 213
Query: 435 PNIIKLLDEYDTNNELYLVIELIKGGDLFDAIS-KNVKFSEEDSKFMTQSLASALSYLHD 493
P ++ L D ++ +NE+ ++ E + GG+LF+ ++ ++ K SE+++ + + L ++H+
Sbjct: 214 PTLVNLHDAFEDDNEMVMIYEFMSGGELFEKVADEHNKMSEDEAVEYMRQVCKGLCHMHE 273
Query: 494 NYIVHRDIKPENLLVEMSGCHVKVLKVGDFGLAQRVLRPMFTV---CGTPTYVAPEILNE 550
N VH D+KPEN++ + LK+ DFGL L P +V GT + APE+
Sbjct: 274 NNYVHLDLKPENIM--FTTKRSNELKLIDFGLTAH-LDPKQSVKVTTGTAEFAAPEVAEG 330
Query: 551 SGYGVKIDVWAAGVILYILLCGFPPFVSDTNDQDELFDDILSGQYGFPSPYWDDISEEAK 610
G D+W+ GV+ YILL G PF + + DE ++ S + + ISE+ K
Sbjct: 331 KPVGYYTDMWSVGVLSYILLSGLSPFGGEND--DETLRNVKSCDWNMDDSAFSGISEDGK 388
Query: 611 ELISHMLESNPDLRFSAEDVLDHPWL 636
+ I +L ++P+ R + L+HPWL
Sbjct: 389 DFIRKLLLADPNTRMTIHQALEHPWL 414
>pdb|2C30|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 6
Length = 321
Score = 137 bits (345), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 77/260 (29%), Positives = 150/260 (57%), Gaps = 22/260 (8%)
Query: 385 IGDGNFAVVRQVYDKHKDMDCALKIIDKSKLLGKKQMIENEVNILRSVNHPNIIKLLDEY 444
IG+G+ +V +KH A+K++D K +++++ NEV I+R H N++++ Y
Sbjct: 53 IGEGSTGIVCLAREKHSGRQVAVKMMDLRKQ-QRRELLFNEVVIMRDYQHFNVVEMYKSY 111
Query: 445 DTNNELYLVIELIKGGDLFDAISKNVKFSEEDSKFMTQSLASALSYLHDNYIVHRDIKPE 504
EL++++E ++GG L D +S+ V+ +EE + +++ AL+YLH ++HRDIK +
Sbjct: 112 LVGEELWVLMEFLQGGALTDIVSQ-VRLNEEQIATVCEAVLQALAYLHAQGVIHRDIKSD 170
Query: 505 NLLVEMSGCHVKVLKVGDFGLAQRVLRPM---FTVCGTPTYVAPEILNESGYGVKIDVWA 561
++L+ + G +K+ DFG ++ + + + GTP ++APE+++ S Y ++D+W+
Sbjct: 171 SILLTLDG----RVKLSDFGFCAQISKDVPKRKXLVGTPYWMAPEVISRSLYATEVDIWS 226
Query: 562 AGVILYILLCGFPPFVSDTNDQ--DELFDDILSGQYGFPSPYWDD---ISEEAKELISHM 616
G+++ ++ G PP+ SD+ Q L D P P + +S ++ + M
Sbjct: 227 LGIMVIEMVDGEPPYFSDSPVQAMKRLRDS--------PPPKLKNSHKVSPVLRDFLERM 278
Query: 617 LESNPDLRFSAEDVLDHPWL 636
L +P R +A+++LDHP+L
Sbjct: 279 LVRDPQERATAQELLDHPFL 298
>pdb|1TKI|A Chain A, Autoinhibited Serine Kinase Domain Of The Giant Muscle
Protein Titin
pdb|1TKI|B Chain B, Autoinhibited Serine Kinase Domain Of The Giant Muscle
Protein Titin
Length = 321
Score = 137 bits (344), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 76/272 (27%), Positives = 144/272 (52%), Gaps = 17/272 (6%)
Query: 374 KLLQRYSVGQIIGDGNFAVVRQVYDKHKDMDCALKIIDKSKLLGKKQ-MIENEVNILRSV 432
+L ++Y + + +G G F +V + + K + K+ G Q +++ E++IL
Sbjct: 2 ELYEKYMIAEDLGRGEFGIVHRCVETSSKKTYMAKFV---KVKGTDQVLVKKEISILNIA 58
Query: 433 NHPNIIKLLDEYDTNNELYLVIELIKGGDLFDAISKNV-KFSEEDSKFMTQSLASALSYL 491
H NI+ L + +++ EL ++ E I G D+F+ I+ + + +E + + AL +L
Sbjct: 59 RHRNILHLHESFESMEELVMIFEFISGLDIFERINTSAFELNEREIVSYVHQVCEALQFL 118
Query: 492 HDNYIVHRDIKPENLLVEMSGCHVKVLKVGDFGLAQRV-----LRPMFTVCGTPTYVAPE 546
H + I H DI+PEN++ + +K+ +FG A+++ R +FT P Y APE
Sbjct: 119 HSHNIGHFDIRPENIIYQTRRS--STIKIIEFGQARQLKPGDNFRLLFT---APEYYAPE 173
Query: 547 ILNESGYGVKIDVWAAGVILYILLCGFPPFVSDTNDQDELFDDILSGQYGFPSPYWDDIS 606
+ D+W+ G ++Y+LL G PF+++TN Q + ++I++ +Y F + +IS
Sbjct: 174 VHQHDVVSTATDMWSLGTLVYVLLSGINPFLAETNQQ--IIENIMNAEYTFDEEAFKEIS 231
Query: 607 EEAKELISHMLESNPDLRFSAEDVLDHPWLER 638
EA + + +L R +A + L HPWL++
Sbjct: 232 IEAMDFVDRLLVKERKSRMTASEALQHPWLKQ 263
>pdb|2V5Q|A Chain A, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
pdb|2V5Q|B Chain B, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
Length = 315
Score = 132 bits (333), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 78/253 (30%), Positives = 138/253 (54%), Gaps = 15/253 (5%)
Query: 385 IGDGNFAVVRQVYDKHKDMDCALKIIDKSKLLG--KKQMIENEVNILRSVNHPNIIKLLD 442
+G G FA ++ D A KI+ KS LL +++ + E++I RS+ H +++
Sbjct: 29 LGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHG 88
Query: 443 EYDTNNELYLVIELIKGGDLFDAISKNVKFSEEDSKFMTQSLASALSYLHDNYIVHRDIK 502
++ N+ +++V+EL + L + + +E ++++ + + YLH N ++HRD+K
Sbjct: 89 FFEDNDFVFVVLELCRRRSLLELHKRRKALTEPEARYYLRQIVLGCQYLHRNRVIHRDLK 148
Query: 503 PENLLVEMSGCHVKVLKVGDFGLAQRVL---RPMFTVCGTPTYVAPEILNESGYGVKIDV 559
NL + +K+GDFGLA +V T+CGTP Y+APE+L++ G+ ++DV
Sbjct: 149 LGNLFLNED----LEVKIGDFGLATKVEYDGERKKTLCGTPNYIAPEVLSKKGHSFEVDV 204
Query: 560 WAAGVILYILLCGFPPFVSDTNDQDELFDDILSGQYGFPSPYWDDISEEAKELISHMLES 619
W+ G I+Y LL G PPF +T+ E + I +Y P I+ A LI ML++
Sbjct: 205 WSIGCIMYTLLVGKPPF--ETSCLKETYLRIKKNEYSIPK----HINPVAASLIQKMLQT 258
Query: 620 NPDLRFSAEDVLD 632
+P R + ++L+
Sbjct: 259 DPTARPTINELLN 271
>pdb|2YAC|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With
Nms-P937
pdb|4A4L|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
5-(2-Amino-Pyrimidin-4-Yl)-1h-Pyrrole Inhibitor
pdb|4A4O|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
2-
(2-Amino-Pyrimidin-4-Yl)-1,5,6,
7-Tetrahydro-Pyrrolopyridin- 4-One Inhibitor
Length = 311
Score = 132 bits (332), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 78/253 (30%), Positives = 138/253 (54%), Gaps = 15/253 (5%)
Query: 385 IGDGNFAVVRQVYDKHKDMDCALKIIDKSKLLG--KKQMIENEVNILRSVNHPNIIKLLD 442
+G G FA ++ D A KI+ KS LL +++ + E++I RS+ H +++
Sbjct: 25 LGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHG 84
Query: 443 EYDTNNELYLVIELIKGGDLFDAISKNVKFSEEDSKFMTQSLASALSYLHDNYIVHRDIK 502
++ N+ +++V+EL + L + + +E ++++ + + YLH N ++HRD+K
Sbjct: 85 FFEDNDFVFVVLELCRRRSLLELHKRRKALTEPEARYYLRQIVLGCQYLHRNRVIHRDLK 144
Query: 503 PENLLVEMSGCHVKVLKVGDFGLAQRVL---RPMFTVCGTPTYVAPEILNESGYGVKIDV 559
NL + +K+GDFGLA +V T+CGTP Y+APE+L++ G+ ++DV
Sbjct: 145 LGNLFLNED----LEVKIGDFGLATKVEYDGERKKTLCGTPNYIAPEVLSKKGHSFEVDV 200
Query: 560 WAAGVILYILLCGFPPFVSDTNDQDELFDDILSGQYGFPSPYWDDISEEAKELISHMLES 619
W+ G I+Y LL G PPF +T+ E + I +Y P I+ A LI ML++
Sbjct: 201 WSIGCIMYTLLVGKPPF--ETSCLKETYLRIKKNEYSIPK----HINPVAASLIQKMLQT 254
Query: 620 NPDLRFSAEDVLD 632
+P R + ++L+
Sbjct: 255 DPTARPTINELLN 267
>pdb|3KB7|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 311
Score = 132 bits (331), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 78/253 (30%), Positives = 138/253 (54%), Gaps = 15/253 (5%)
Query: 385 IGDGNFAVVRQVYDKHKDMDCALKIIDKSKLLG--KKQMIENEVNILRSVNHPNIIKLLD 442
+G G FA ++ D A KI+ KS LL +++ + E++I RS+ H +++
Sbjct: 25 LGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHG 84
Query: 443 EYDTNNELYLVIELIKGGDLFDAISKNVKFSEEDSKFMTQSLASALSYLHDNYIVHRDIK 502
++ N+ +++V+EL + L + + +E ++++ + + YLH N ++HRD+K
Sbjct: 85 FFEDNDFVFVVLELCRRRSLLELHKRRKALTEPEARYYLRQIVLGCQYLHRNRVIHRDLK 144
Query: 503 PENLLVEMSGCHVKVLKVGDFGLAQRVL---RPMFTVCGTPTYVAPEILNESGYGVKIDV 559
NL + +K+GDFGLA +V T+CGTP Y+APE+L++ G+ ++DV
Sbjct: 145 LGNLFLNED----LEVKIGDFGLATKVEYDGERKKTLCGTPNYIAPEVLSKKGHSFEVDV 200
Query: 560 WAAGVILYILLCGFPPFVSDTNDQDELFDDILSGQYGFPSPYWDDISEEAKELISHMLES 619
W+ G I+Y LL G PPF +T+ E + I +Y P I+ A LI ML++
Sbjct: 201 WSIGCIMYTLLVGKPPF--ETSCLKETYLRIKKNEYSIPK----HINPVAASLIQKMLQT 254
Query: 620 NPDLRFSAEDVLD 632
+P R + ++L+
Sbjct: 255 DPTARPTINELLN 267
>pdb|2R7B|A Chain A, Crystal Structure Of The Phosphoinositide-Dependent
Kinase- 1 (Pdk-1)catalytic Domain Bound To A
Dibenzonaphthyridine Inhibitor
pdb|3ION|A Chain A, Pdk1 In Complex With Compound 8h
Length = 312
Score = 130 bits (328), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 81/273 (29%), Positives = 143/273 (52%), Gaps = 25/273 (9%)
Query: 379 YSVGQIIGDGNFAVVRQVYDKHKDMDCALKIIDKSKLLGKKQM--IENEVNILRSVNHPN 436
+ G+I+G+G+F+ V + + A+KI++K ++ + ++ + E +++ ++HP
Sbjct: 35 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPF 94
Query: 437 IIKLLDEYDTNNELYLVIELIKGGDLFDAISKNVKFSEEDSKFMTQSLASALSYLHDNYI 496
+KL + + +LY + K G+L I K F E ++F T + SAL YLH I
Sbjct: 95 FVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKGI 154
Query: 497 VHRDIKPENLLVEMSGCHVKVLKVGDFGLAQRVLRP------MFTVCGTPTYVAPEILNE 550
+HRD+KPEN+L+ H+++ DFG A +VL P + GT YV+PE+L E
Sbjct: 155 IHRDLKPENILLN-EDMHIQIT---DFGTA-KVLSPESKQARANSFVGTAQYVSPELLTE 209
Query: 551 SGYGVKIDVWAAGVILYILLCGFPPFVSDTNDQDELFDDILSGQYGFPSPYWDDISEEAK 610
D+WA G I+Y L+ G PPF + ++ +F I+ +Y FP ++ +A+
Sbjct: 210 KSACKSSDLWALGCIIYQLVAGLPPFRA--GNEYLIFQKIIKLEYDFPEKFFP----KAR 263
Query: 611 ELISHMLESNPDLRFSAEDVLD------HPWLE 637
+L+ +L + R E++ HP+ E
Sbjct: 264 DLVEKLLVLDATKRLGCEEMEGYGPLKAHPFFE 296
>pdb|3QC4|A Chain A, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
pdb|3QC4|B Chain B, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
Length = 314
Score = 130 bits (328), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 81/273 (29%), Positives = 143/273 (52%), Gaps = 25/273 (9%)
Query: 379 YSVGQIIGDGNFAVVRQVYDKHKDMDCALKIIDKSKLLGKKQM--IENEVNILRSVNHPN 436
+ G+I+G+G+F+ V + + A+KI++K ++ + ++ + E +++ ++HP
Sbjct: 37 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPF 96
Query: 437 IIKLLDEYDTNNELYLVIELIKGGDLFDAISKNVKFSEEDSKFMTQSLASALSYLHDNYI 496
+KL + + +LY + K G+L I K F E ++F T + SAL YLH I
Sbjct: 97 FVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKGI 156
Query: 497 VHRDIKPENLLVEMSGCHVKVLKVGDFGLAQRVLRP------MFTVCGTPTYVAPEILNE 550
+HRD+KPEN+L+ H+++ DFG A +VL P GT YV+PE+L E
Sbjct: 157 IHRDLKPENILLN-EDMHIQIT---DFGTA-KVLSPESKQARANXFVGTAQYVSPELLTE 211
Query: 551 SGYGVKIDVWAAGVILYILLCGFPPFVSDTNDQDELFDDILSGQYGFPSPYWDDISEEAK 610
D+WA G I+Y L+ G PPF + ++ +F I+ +Y FP+ ++ +A+
Sbjct: 212 KSACKSSDLWALGCIIYQLVAGLPPFRA--GNEYLIFQKIIKLEYDFPAAFFP----KAR 265
Query: 611 ELISHMLESNPDLRFSAEDVLD------HPWLE 637
+L+ +L + R E++ HP+ E
Sbjct: 266 DLVEKLLVLDATKRLGCEEMEGYGPLKAHPFFE 298
>pdb|3NAX|A Chain A, Pdk1 In Complex With Inhibitor Mp7
Length = 311
Score = 130 bits (328), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 81/273 (29%), Positives = 143/273 (52%), Gaps = 25/273 (9%)
Query: 379 YSVGQIIGDGNFAVVRQVYDKHKDMDCALKIIDKSKLLGKKQM--IENEVNILRSVNHPN 436
+ G+I+G+G+F+ V + + A+KI++K ++ + ++ + E +++ ++HP
Sbjct: 31 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPF 90
Query: 437 IIKLLDEYDTNNELYLVIELIKGGDLFDAISKNVKFSEEDSKFMTQSLASALSYLHDNYI 496
+KL + + +LY + K G+L I K F E ++F T + SAL YLH I
Sbjct: 91 FVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKGI 150
Query: 497 VHRDIKPENLLVEMSGCHVKVLKVGDFGLAQRVLRP------MFTVCGTPTYVAPEILNE 550
+HRD+KPEN+L+ H+++ DFG A +VL P + GT YV+PE+L E
Sbjct: 151 IHRDLKPENILLN-EDMHIQIT---DFGTA-KVLSPESKQARANSFVGTAQYVSPELLTE 205
Query: 551 SGYGVKIDVWAAGVILYILLCGFPPFVSDTNDQDELFDDILSGQYGFPSPYWDDISEEAK 610
D+WA G I+Y L+ G PPF + ++ +F I+ +Y FP ++ +A+
Sbjct: 206 KSACKSSDLWALGCIIYQLVAGLPPFRA--GNEYLIFQKIIKLEYDFPEKFFP----KAR 259
Query: 611 ELISHMLESNPDLRFSAEDVLD------HPWLE 637
+L+ +L + R E++ HP+ E
Sbjct: 260 DLVEKLLVLDATKRLGCEEMEGYGPLKAHPFFE 292
>pdb|4A07|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps171 Bound To The Pif-Pocket
pdb|4AW0|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps182 Bound To The Pif-Pocket
Length = 311
Score = 130 bits (328), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 81/273 (29%), Positives = 142/273 (52%), Gaps = 25/273 (9%)
Query: 379 YSVGQIIGDGNFAVVRQVYDKHKDMDCALKIIDKSKLLGKKQM--IENEVNILRSVNHPN 436
+ G+I+G+G+F+ V + + A+KI++K ++ + ++ + E +++ ++HP
Sbjct: 34 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPF 93
Query: 437 IIKLLDEYDTNNELYLVIELIKGGDLFDAISKNVKFSEEDSKFMTQSLASALSYLHDNYI 496
+KL + + +LY + K G+L I K F E ++F T + SAL YLH I
Sbjct: 94 FVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKGI 153
Query: 497 VHRDIKPENLLVEMSGCHVKVLKVGDFGLAQRVLRP------MFTVCGTPTYVAPEILNE 550
+HRD+KPEN+L+ H+++ DFG A +VL P GT YV+PE+L E
Sbjct: 154 IHRDLKPENILLN-EDMHIQIT---DFGTA-KVLSPESKQARANXFVGTAQYVSPELLTE 208
Query: 551 SGYGVKIDVWAAGVILYILLCGFPPFVSDTNDQDELFDDILSGQYGFPSPYWDDISEEAK 610
D+WA G I+Y L+ G PPF + ++ +F I+ +Y FP ++ +A+
Sbjct: 209 KSAXKSSDLWALGCIIYQLVAGLPPFRA--GNEGLIFAKIIKLEYDFPEKFFP----KAR 262
Query: 611 ELISHMLESNPDLRFSAEDVLD------HPWLE 637
+L+ +L + R E++ HP+ E
Sbjct: 263 DLVEKLLVLDATKRLGCEEMEGYGPLKAHPFFE 295
>pdb|2BIY|A Chain A, Structure Of Pdk1-S241a Mutant Kinase Domain
Length = 310
Score = 130 bits (328), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 81/273 (29%), Positives = 142/273 (52%), Gaps = 25/273 (9%)
Query: 379 YSVGQIIGDGNFAVVRQVYDKHKDMDCALKIIDKSKLLGKKQM--IENEVNILRSVNHPN 436
+ G+I+G+G+F+ V + + A+KI++K ++ + ++ + E +++ ++HP
Sbjct: 32 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPF 91
Query: 437 IIKLLDEYDTNNELYLVIELIKGGDLFDAISKNVKFSEEDSKFMTQSLASALSYLHDNYI 496
+KL + + +LY + K G+L I K F E ++F T + SAL YLH I
Sbjct: 92 FVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKGI 151
Query: 497 VHRDIKPENLLVEMSGCHVKVLKVGDFGLAQRVLRP------MFTVCGTPTYVAPEILNE 550
+HRD+KPEN+L+ H+++ DFG A +VL P GT YV+PE+L E
Sbjct: 152 IHRDLKPENILLN-EDMHIQIT---DFGTA-KVLSPESKQARANAFVGTAQYVSPELLTE 206
Query: 551 SGYGVKIDVWAAGVILYILLCGFPPFVSDTNDQDELFDDILSGQYGFPSPYWDDISEEAK 610
D+WA G I+Y L+ G PPF + ++ +F I+ +Y FP ++ +A+
Sbjct: 207 KSACKSSDLWALGCIIYQLVAGLPPFRA--GNEYLIFQKIIKLEYDFPEKFFP----KAR 260
Query: 611 ELISHMLESNPDLRFSAEDVLD------HPWLE 637
+L+ +L + R E++ HP+ E
Sbjct: 261 DLVEKLLVLDATKRLGCEEMEGYGPLKAHPFFE 293
>pdb|1Z5M|A Chain A, Crystal Structure Of
N1-[3-[[5-bromo-2-[[3-[(1-pyrrolidinylcarbonyl)
Amino]phenyl]amino]-4-pyrimidinyl]amino]propyl]-2,2-
Dimethylpropanediamide Complexed With Human Pdk1
pdb|2PE0|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
5-Hydroxy-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-1,
3-Dihydro- Indol-2-One Complex
pdb|2PE1|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
{2-Oxo-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-2,
3-Dihydro-1h- Indol-5-Yl}-Urea {bx-517} Complex
pdb|2PE2|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
3-{5-[2-Oxo-5-Ureido-1,
2-Dihydro-Indol-(3z)-Ylidenemethyl]-1h-
Pyrrol-3-Yl}-N-(2-Piperidin-1-Yl-Ethyl)-Benzamide
Complex
Length = 286
Score = 130 bits (328), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 81/273 (29%), Positives = 142/273 (52%), Gaps = 25/273 (9%)
Query: 379 YSVGQIIGDGNFAVVRQVYDKHKDMDCALKIIDKSKLLGKKQM--IENEVNILRSVNHPN 436
+ G+I+G+G+F+ V + + A+KI++K ++ + ++ + E +++ ++HP
Sbjct: 9 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPF 68
Query: 437 IIKLLDEYDTNNELYLVIELIKGGDLFDAISKNVKFSEEDSKFMTQSLASALSYLHDNYI 496
+KL + + +LY + K G+L I K F E ++F T + SAL YLH I
Sbjct: 69 FVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKGI 128
Query: 497 VHRDIKPENLLVEMSGCHVKVLKVGDFGLAQRVLRP------MFTVCGTPTYVAPEILNE 550
+HRD+KPEN+L+ H+++ DFG A +VL P GT YV+PE+L E
Sbjct: 129 IHRDLKPENILLN-EDMHIQIT---DFGTA-KVLSPESKQARANXFVGTAQYVSPELLTE 183
Query: 551 SGYGVKIDVWAAGVILYILLCGFPPFVSDTNDQDELFDDILSGQYGFPSPYWDDISEEAK 610
D+WA G I+Y L+ G PPF + ++ +F I+ +Y FP ++ +A+
Sbjct: 184 KSACKSSDLWALGCIIYQLVAGLPPFRA--GNEYLIFQKIIKLEYDFPEKFFP----KAR 237
Query: 611 ELISHMLESNPDLRFSAEDVLD------HPWLE 637
+L+ +L + R E++ HP+ E
Sbjct: 238 DLVEKLLVLDATKRLGCEEMEGYGPLKAHPFFE 270
>pdb|3HRC|A Chain A, Crystal Structure Of A Mutant Of Human Pdk1 Kinase Domain
In Complex With Atp
pdb|3HRF|A Chain A, Crystal Structure Of Human Pdk1 Kinase Domain In Complex
With An Allosteric Activator Bound To The Pif-Pocket
pdb|3RCJ|A Chain A, Rapid Preparation Of Triazolyl Substituted Nh-Heterocyclic
Kinase Inhibitors Via One-Pot Sonogashira Coupling
Tms-Deprotection Cuaac Sequence
pdb|4A06|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps114 Bound To The Pif-Pocket
pdb|4AW1|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps210 Bound To The Pif-Pocket
Length = 311
Score = 130 bits (327), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 81/273 (29%), Positives = 142/273 (52%), Gaps = 25/273 (9%)
Query: 379 YSVGQIIGDGNFAVVRQVYDKHKDMDCALKIIDKSKLLGKKQM--IENEVNILRSVNHPN 436
+ G+I+G+G+F+ V + + A+KI++K ++ + ++ + E +++ ++HP
Sbjct: 34 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPF 93
Query: 437 IIKLLDEYDTNNELYLVIELIKGGDLFDAISKNVKFSEEDSKFMTQSLASALSYLHDNYI 496
+KL + + +LY + K G+L I K F E ++F T + SAL YLH I
Sbjct: 94 FVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKGI 153
Query: 497 VHRDIKPENLLVEMSGCHVKVLKVGDFGLAQRVLRP------MFTVCGTPTYVAPEILNE 550
+HRD+KPEN+L+ H+++ DFG A +VL P GT YV+PE+L E
Sbjct: 154 IHRDLKPENILLN-EDMHIQIT---DFGTA-KVLSPESKQARANXFVGTAQYVSPELLTE 208
Query: 551 SGYGVKIDVWAAGVILYILLCGFPPFVSDTNDQDELFDDILSGQYGFPSPYWDDISEEAK 610
D+WA G I+Y L+ G PPF + ++ +F I+ +Y FP ++ +A+
Sbjct: 209 KSACKSSDLWALGCIIYQLVAGLPPFRA--GNEGLIFAKIIKLEYDFPEKFFP----KAR 262
Query: 611 ELISHMLESNPDLRFSAEDVLD------HPWLE 637
+L+ +L + R E++ HP+ E
Sbjct: 263 DLVEKLLVLDATKRLGCEEMEGYGPLKAHPFFE 295
>pdb|3NUS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment8
pdb|3NUU|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment11
pdb|3NUY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment17
Length = 286
Score = 130 bits (327), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 81/273 (29%), Positives = 142/273 (52%), Gaps = 25/273 (9%)
Query: 379 YSVGQIIGDGNFAVVRQVYDKHKDMDCALKIIDKSKLLGKKQM--IENEVNILRSVNHPN 436
+ G+I+G+G+F+ V + + A+KI++K ++ + ++ + E +++ ++HP
Sbjct: 10 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPF 69
Query: 437 IIKLLDEYDTNNELYLVIELIKGGDLFDAISKNVKFSEEDSKFMTQSLASALSYLHDNYI 496
+KL + + +LY + K G+L I K F E ++F T + SAL YLH I
Sbjct: 70 FVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKGI 129
Query: 497 VHRDIKPENLLVEMSGCHVKVLKVGDFGLAQRVLRP------MFTVCGTPTYVAPEILNE 550
+HRD+KPEN+L+ H+++ DFG A +VL P GT YV+PE+L E
Sbjct: 130 IHRDLKPENILLN-EDMHIQIT---DFGTA-KVLSPESKQARANXFVGTAQYVSPELLTE 184
Query: 551 SGYGVKIDVWAAGVILYILLCGFPPFVSDTNDQDELFDDILSGQYGFPSPYWDDISEEAK 610
D+WA G I+Y L+ G PPF + ++ +F I+ +Y FP ++ +A+
Sbjct: 185 KSACKSSDLWALGCIIYQLVAGLPPFRA--GNEYLIFQKIIKLEYDFPEKFFP----KAR 238
Query: 611 ELISHMLESNPDLRFSAEDVLD------HPWLE 637
+L+ +L + R E++ HP+ E
Sbjct: 239 DLVEKLLVLDATKRLGCEEMEGYGPLKAHPFFE 271
>pdb|1H1W|A Chain A, High Resolution Crystal Structure Of The Human Pdk1
Catalytic Domain
pdb|1UVR|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-8
Length = 289
Score = 130 bits (327), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 81/273 (29%), Positives = 142/273 (52%), Gaps = 25/273 (9%)
Query: 379 YSVGQIIGDGNFAVVRQVYDKHKDMDCALKIIDKSKLLGKKQM--IENEVNILRSVNHPN 436
+ G+I+G+G+F+ V + + A+KI++K ++ + ++ + E +++ ++HP
Sbjct: 12 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPF 71
Query: 437 IIKLLDEYDTNNELYLVIELIKGGDLFDAISKNVKFSEEDSKFMTQSLASALSYLHDNYI 496
+KL + + +LY + K G+L I K F E ++F T + SAL YLH I
Sbjct: 72 FVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKGI 131
Query: 497 VHRDIKPENLLVEMSGCHVKVLKVGDFGLAQRVLRP------MFTVCGTPTYVAPEILNE 550
+HRD+KPEN+L+ H+++ DFG A +VL P GT YV+PE+L E
Sbjct: 132 IHRDLKPENILLN-EDMHIQIT---DFGTA-KVLSPESKQARANXFVGTAQYVSPELLTE 186
Query: 551 SGYGVKIDVWAAGVILYILLCGFPPFVSDTNDQDELFDDILSGQYGFPSPYWDDISEEAK 610
D+WA G I+Y L+ G PPF + ++ +F I+ +Y FP ++ +A+
Sbjct: 187 KSACKSSDLWALGCIIYQLVAGLPPFRA--GNEYLIFQKIIKLEYDFPEKFFP----KAR 240
Query: 611 ELISHMLESNPDLRFSAEDVLD------HPWLE 637
+L+ +L + R E++ HP+ E
Sbjct: 241 DLVEKLLVLDATKRLGCEEMEGYGPLKAHPFFE 273
>pdb|1UU3|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ly333531
pdb|1UU7|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-2
pdb|1UU8|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-1
pdb|1OKY|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Staurosporine
pdb|1OKZ|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ucn-01
Length = 310
Score = 130 bits (327), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 81/273 (29%), Positives = 142/273 (52%), Gaps = 25/273 (9%)
Query: 379 YSVGQIIGDGNFAVVRQVYDKHKDMDCALKIIDKSKLLGKKQM--IENEVNILRSVNHPN 436
+ G+I+G+G+F+ V + + A+KI++K ++ + ++ + E +++ ++HP
Sbjct: 32 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPF 91
Query: 437 IIKLLDEYDTNNELYLVIELIKGGDLFDAISKNVKFSEEDSKFMTQSLASALSYLHDNYI 496
+KL + + +LY + K G+L I K F E ++F T + SAL YLH I
Sbjct: 92 FVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKGI 151
Query: 497 VHRDIKPENLLVEMSGCHVKVLKVGDFGLAQRVLRP------MFTVCGTPTYVAPEILNE 550
+HRD+KPEN+L+ H+++ DFG A +VL P GT YV+PE+L E
Sbjct: 152 IHRDLKPENILLN-EDMHIQIT---DFGTA-KVLSPESKQARANXFVGTAQYVSPELLTE 206
Query: 551 SGYGVKIDVWAAGVILYILLCGFPPFVSDTNDQDELFDDILSGQYGFPSPYWDDISEEAK 610
D+WA G I+Y L+ G PPF + ++ +F I+ +Y FP ++ +A+
Sbjct: 207 KSACKSSDLWALGCIIYQLVAGLPPFRA--GNEYLIFQKIIKLEYDFPEKFFP----KAR 260
Query: 611 ELISHMLESNPDLRFSAEDVLD------HPWLE 637
+L+ +L + R E++ HP+ E
Sbjct: 261 DLVEKLLVLDATKRLGCEEMEGYGPLKAHPFFE 293
>pdb|1UU9|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-3
Length = 286
Score = 130 bits (327), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 81/273 (29%), Positives = 142/273 (52%), Gaps = 25/273 (9%)
Query: 379 YSVGQIIGDGNFAVVRQVYDKHKDMDCALKIIDKSKLLGKKQM--IENEVNILRSVNHPN 436
+ G+I+G+G+F+ V + + A+KI++K ++ + ++ + E +++ ++HP
Sbjct: 11 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPF 70
Query: 437 IIKLLDEYDTNNELYLVIELIKGGDLFDAISKNVKFSEEDSKFMTQSLASALSYLHDNYI 496
+KL + + +LY + K G+L I K F E ++F T + SAL YLH I
Sbjct: 71 FVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKGI 130
Query: 497 VHRDIKPENLLVEMSGCHVKVLKVGDFGLAQRVLRP------MFTVCGTPTYVAPEILNE 550
+HRD+KPEN+L+ H+++ DFG A +VL P GT YV+PE+L E
Sbjct: 131 IHRDLKPENILLN-EDMHIQIT---DFGTA-KVLSPESKQARANXFVGTAQYVSPELLTE 185
Query: 551 SGYGVKIDVWAAGVILYILLCGFPPFVSDTNDQDELFDDILSGQYGFPSPYWDDISEEAK 610
D+WA G I+Y L+ G PPF + ++ +F I+ +Y FP ++ +A+
Sbjct: 186 KSACKSSDLWALGCIIYQLVAGLPPFRA--GNEYLIFQKIIKLEYDFPEKFFP----KAR 239
Query: 611 ELISHMLESNPDLRFSAEDVLD------HPWLE 637
+L+ +L + R E++ HP+ E
Sbjct: 240 DLVEKLLVLDATKRLGCEEMEGYGPLKAHPFFE 272
>pdb|3THB|A Chain A, Structure Of Plk1 Kinase Domain In Complex With A
Benzolactam-Derived Inhibitor
Length = 333
Score = 130 bits (327), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 77/253 (30%), Positives = 137/253 (54%), Gaps = 15/253 (5%)
Query: 385 IGDGNFAVVRQVYDKHKDMDCALKIIDKSKLLG--KKQMIENEVNILRSVNHPNIIKLLD 442
+G G FA ++ D A KI+ KS LL +++ + E++I RS+ H +++
Sbjct: 47 LGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHG 106
Query: 443 EYDTNNELYLVIELIKGGDLFDAISKNVKFSEEDSKFMTQSLASALSYLHDNYIVHRDIK 502
++ N+ +++V+EL + L + + +E ++++ + + YLH N ++HRD+K
Sbjct: 107 FFEDNDFVFVVLELCRRRSLLELHKRRKALTEPEARYYLRQIVLGCQYLHRNRVIHRDLK 166
Query: 503 PENLLVEMSGCHVKVLKVGDFGLAQRVL---RPMFTVCGTPTYVAPEILNESGYGVKIDV 559
NL + +K+GDFGLA +V +CGTP Y+APE+L++ G+ ++DV
Sbjct: 167 LGNLFLNED----LEVKIGDFGLATKVEYDGERKKVLCGTPNYIAPEVLSKKGHSFEVDV 222
Query: 560 WAAGVILYILLCGFPPFVSDTNDQDELFDDILSGQYGFPSPYWDDISEEAKELISHMLES 619
W+ G I+Y LL G PPF +T+ E + I +Y P I+ A LI ML++
Sbjct: 223 WSIGCIMYTLLVGKPPF--ETSCLKETYLRIKKNEYSIPK----HINPVAASLIQKMLQT 276
Query: 620 NPDLRFSAEDVLD 632
+P R + ++L+
Sbjct: 277 DPTARPTINELLN 289
>pdb|3RWP|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 130 bits (327), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 81/273 (29%), Positives = 142/273 (52%), Gaps = 25/273 (9%)
Query: 379 YSVGQIIGDGNFAVVRQVYDKHKDMDCALKIIDKSKLLGKKQM--IENEVNILRSVNHPN 436
+ G+I+G+G+F+ V + + A+KI++K ++ + ++ + E +++ ++HP
Sbjct: 34 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPF 93
Query: 437 IIKLLDEYDTNNELYLVIELIKGGDLFDAISKNVKFSEEDSKFMTQSLASALSYLHDNYI 496
+KL + + +LY + K G+L I K F E ++F T + SAL YLH I
Sbjct: 94 FVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKGI 153
Query: 497 VHRDIKPENLLVEMSGCHVKVLKVGDFGLAQRVLRP------MFTVCGTPTYVAPEILNE 550
+HRD+KPEN+L+ H+++ DFG A +VL P GT YV+PE+L E
Sbjct: 154 IHRDLKPENILLN-EDMHIQIT---DFGTA-KVLSPESKQARANXFVGTAQYVSPELLTE 208
Query: 551 SGYGVKIDVWAAGVILYILLCGFPPFVSDTNDQDELFDDILSGQYGFPSPYWDDISEEAK 610
D+WA G I+Y L+ G PPF + ++ +F I+ +Y FP ++ +A+
Sbjct: 209 KSACKSSDLWALGCIIYQLVAGLPPFRA--GNEYLIFQKIIKLEYDFPEKFFP----KAR 262
Query: 611 ELISHMLESNPDLRFSAEDVLD------HPWLE 637
+L+ +L + R E++ HP+ E
Sbjct: 263 DLVEKLLVLDATKRLGCEEMEGYGPLKAHPFFE 295
>pdb|3SC1|A Chain A, Novel Isoquinolone Pdk1 Inhibitors Discovered Through
Fragment-Based Lead Discovery
pdb|3RWQ|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 130 bits (326), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 81/273 (29%), Positives = 142/273 (52%), Gaps = 25/273 (9%)
Query: 379 YSVGQIIGDGNFAVVRQVYDKHKDMDCALKIIDKSKLLGKKQM--IENEVNILRSVNHPN 436
+ G+I+G+G+F+ V + + A+KI++K ++ + ++ + E +++ ++HP
Sbjct: 34 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPF 93
Query: 437 IIKLLDEYDTNNELYLVIELIKGGDLFDAISKNVKFSEEDSKFMTQSLASALSYLHDNYI 496
+KL + + +LY + K G+L I K F E ++F T + SAL YLH I
Sbjct: 94 FVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKGI 153
Query: 497 VHRDIKPENLLVEMSGCHVKVLKVGDFGLAQRVLRP------MFTVCGTPTYVAPEILNE 550
+HRD+KPEN+L+ H+++ DFG A +VL P GT YV+PE+L E
Sbjct: 154 IHRDLKPENILLN-EDMHIQIT---DFGTA-KVLSPESKQARANXFVGTAQYVSPELLTE 208
Query: 551 SGYGVKIDVWAAGVILYILLCGFPPFVSDTNDQDELFDDILSGQYGFPSPYWDDISEEAK 610
D+WA G I+Y L+ G PPF + ++ +F I+ +Y FP ++ +A+
Sbjct: 209 KSACKSSDLWALGCIIYQLVAGLPPFRA--GNEYLIFQKIIKLEYDFPEKFFP----KAR 262
Query: 611 ELISHMLESNPDLRFSAEDVLD------HPWLE 637
+L+ +L + R E++ HP+ E
Sbjct: 263 DLVEKLLVLDATKRLGCEEMEGYGPLKAHPFFE 295
>pdb|2RKU|A Chain A, Structure Of Plk1 In Complex With Bi2536
Length = 294
Score = 130 bits (326), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 77/253 (30%), Positives = 137/253 (54%), Gaps = 15/253 (5%)
Query: 385 IGDGNFAVVRQVYDKHKDMDCALKIIDKSKLLG--KKQMIENEVNILRSVNHPNIIKLLD 442
+G G FA ++ D A KI+ KS LL +++ + E++I RS+ H +++
Sbjct: 23 LGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHG 82
Query: 443 EYDTNNELYLVIELIKGGDLFDAISKNVKFSEEDSKFMTQSLASALSYLHDNYIVHRDIK 502
++ N+ +++V+EL + L + + +E ++++ + + YLH N ++HRD+K
Sbjct: 83 FFEDNDFVFVVLELCRRRSLLELHKRRKALTEPEARYYLRQIVLGCQYLHRNRVIHRDLK 142
Query: 503 PENLLVEMSGCHVKVLKVGDFGLAQRVL---RPMFTVCGTPTYVAPEILNESGYGVKIDV 559
NL + +K+GDFGLA +V +CGTP Y+APE+L++ G+ ++DV
Sbjct: 143 LGNLFLNED----LEVKIGDFGLATKVEYDGERKKVLCGTPNYIAPEVLSKKGHSFEVDV 198
Query: 560 WAAGVILYILLCGFPPFVSDTNDQDELFDDILSGQYGFPSPYWDDISEEAKELISHMLES 619
W+ G I+Y LL G PPF +T+ E + I +Y P I+ A LI ML++
Sbjct: 199 WSIGCIMYTLLVGKPPF--ETSCLKETYLRIKKNEYSIPK----HINPVAASLIQKMLQT 252
Query: 620 NPDLRFSAEDVLD 632
+P R + ++L+
Sbjct: 253 DPTARPTINELLN 265
>pdb|2OU7|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|2OWB|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|3FC2|A Chain A, Plk1 In Complex With Bi6727
Length = 335
Score = 130 bits (326), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 77/253 (30%), Positives = 137/253 (54%), Gaps = 15/253 (5%)
Query: 385 IGDGNFAVVRQVYDKHKDMDCALKIIDKSKLLG--KKQMIENEVNILRSVNHPNIIKLLD 442
+G G FA ++ D A KI+ KS LL +++ + E++I RS+ H +++
Sbjct: 49 LGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHG 108
Query: 443 EYDTNNELYLVIELIKGGDLFDAISKNVKFSEEDSKFMTQSLASALSYLHDNYIVHRDIK 502
++ N+ +++V+EL + L + + +E ++++ + + YLH N ++HRD+K
Sbjct: 109 FFEDNDFVFVVLELCRRRSLLELHKRRKALTEPEARYYLRQIVLGCQYLHRNRVIHRDLK 168
Query: 503 PENLLVEMSGCHVKVLKVGDFGLAQRVL---RPMFTVCGTPTYVAPEILNESGYGVKIDV 559
NL + +K+GDFGLA +V +CGTP Y+APE+L++ G+ ++DV
Sbjct: 169 LGNLFLNED----LEVKIGDFGLATKVEYDGERKKVLCGTPNYIAPEVLSKKGHSFEVDV 224
Query: 560 WAAGVILYILLCGFPPFVSDTNDQDELFDDILSGQYGFPSPYWDDISEEAKELISHMLES 619
W+ G I+Y LL G PPF +T+ E + I +Y P I+ A LI ML++
Sbjct: 225 WSIGCIMYTLLVGKPPF--ETSCLKETYLRIKKNEYSIPK----HINPVAASLIQKMLQT 278
Query: 620 NPDLRFSAEDVLD 632
+P R + ++L+
Sbjct: 279 DPTARPTINELLN 291
>pdb|3H9O|A Chain A, Phosphoinositide-Dependent Protein Kinase 1 (Pdk-1) In
Complex With Compound 9
Length = 311
Score = 130 bits (326), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 81/273 (29%), Positives = 142/273 (52%), Gaps = 25/273 (9%)
Query: 379 YSVGQIIGDGNFAVVRQVYDKHKDMDCALKIIDKSKLLGKKQM--IENEVNILRSVNHPN 436
+ G+I+G+G+F+ V + + A+KI++K ++ + ++ + E +++ ++HP
Sbjct: 34 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPF 93
Query: 437 IIKLLDEYDTNNELYLVIELIKGGDLFDAISKNVKFSEEDSKFMTQSLASALSYLHDNYI 496
+KL + + +LY + K G+L I K F E ++F T + SAL YLH I
Sbjct: 94 FVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKGI 153
Query: 497 VHRDIKPENLLVEMSGCHVKVLKVGDFGLAQRVLRP------MFTVCGTPTYVAPEILNE 550
+HRD+KPEN+L+ H+++ DFG A +VL P GT YV+PE+L E
Sbjct: 154 IHRDLKPENILLN-EDMHIQIT---DFGTA-KVLSPESKQARANXFVGTAQYVSPELLTE 208
Query: 551 SGYGVKIDVWAAGVILYILLCGFPPFVSDTNDQDELFDDILSGQYGFPSPYWDDISEEAK 610
D+WA G I+Y L+ G PPF + ++ +F I+ +Y FP ++ +A+
Sbjct: 209 KSACKSSDLWALGCIIYQLVAGLPPFRA--GNEYLIFQKIIKLEYDFPEKFFP----KAR 262
Query: 611 ELISHMLESNPDLRFSAEDVLD------HPWLE 637
+L+ +L + R E++ HP+ E
Sbjct: 263 DLVEKLLVLDATKRLGCEEMEGYGPLKAHPFFE 295
>pdb|2XCH|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 130 bits (326), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 81/273 (29%), Positives = 142/273 (52%), Gaps = 25/273 (9%)
Query: 379 YSVGQIIGDGNFAVVRQVYDKHKDMDCALKIIDKSKLLGKKQM--IENEVNILRSVNHPN 436
+ G+I+G+G+F+ V + + A+KI++K ++ + ++ + E +++ ++HP
Sbjct: 32 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPF 91
Query: 437 IIKLLDEYDTNNELYLVIELIKGGDLFDAISKNVKFSEEDSKFMTQSLASALSYLHDNYI 496
+KL + + +LY + K G+L I K F E ++F T + SAL YLH I
Sbjct: 92 FVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKGI 151
Query: 497 VHRDIKPENLLVEMSGCHVKVLKVGDFGLAQRVLRP------MFTVCGTPTYVAPEILNE 550
+HRD+KPEN+L+ H+++ DFG A +VL P GT YV+PE+L E
Sbjct: 152 IHRDLKPENILLN-EDMHIQIT---DFGTA-KVLSPESKQARANXFVGTAQYVSPELLTE 206
Query: 551 SGYGVKIDVWAAGVILYILLCGFPPFVSDTNDQDELFDDILSGQYGFPSPYWDDISEEAK 610
D+WA G I+Y L+ G PPF + ++ +F I+ +Y FP ++ +A+
Sbjct: 207 KSACKSSDLWALGCIIYQLVAGLPPFRA--GNEYLIFQKIIKLEYDFPEKFFP----KAR 260
Query: 611 ELISHMLESNPDLRFSAEDVLD------HPWLE 637
+L+ +L + R E++ HP+ E
Sbjct: 261 DLVEKLLVLDATKRLGCEEMEGYGPLKAHPFFE 293
>pdb|3IOP|A Chain A, Pdk-1 In Complex With The Inhibitor Compound-8i
pdb|3QCQ|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-(3-
Amino-1h-Indazol-6-Yl)-N4-Ethyl-2,4-Pyrimidinediamine
pdb|3QCS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-[2-
Amino-6-(4-Morpholinyl)-4-Pyrimidinyl]-1h-Indazol-3-
Amine
pdb|3QCX|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-{2-
Amino-6-[(3r)-3-Methyl-4-Morpholinyl]-4-Pyrimidinyl}-1h-
Indazol-3- Amine
pdb|3QCY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 4-[2-
Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-N-
Phenyl-2- Morpholinecarboxamide
pdb|3QD0|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With (2r,5s)-
1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-6-
Methyl-N- Phenyl-3-Piperidinecarboxamide
pdb|3QD3|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1- Dimethylethyl
{(3r,6s)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-6-Methyl-3-Piperidinyl}carbamate
pdb|3QD4|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1-
Dimethylethyl{(3r,
5r)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-5-Methyl-3-Piperidinyl}carbamate
Length = 312
Score = 130 bits (326), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 81/273 (29%), Positives = 142/273 (52%), Gaps = 25/273 (9%)
Query: 379 YSVGQIIGDGNFAVVRQVYDKHKDMDCALKIIDKSKLLGKKQM--IENEVNILRSVNHPN 436
+ G+I+G+G+F+ V + + A+KI++K ++ + ++ + E +++ ++HP
Sbjct: 35 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPF 94
Query: 437 IIKLLDEYDTNNELYLVIELIKGGDLFDAISKNVKFSEEDSKFMTQSLASALSYLHDNYI 496
+KL + + +LY + K G+L I K F E ++F T + SAL YLH I
Sbjct: 95 FVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKGI 154
Query: 497 VHRDIKPENLLVEMSGCHVKVLKVGDFGLAQRVLRP------MFTVCGTPTYVAPEILNE 550
+HRD+KPEN+L+ H+++ DFG A +VL P GT YV+PE+L E
Sbjct: 155 IHRDLKPENILLN-EDMHIQIT---DFGTA-KVLSPESKQARANXFVGTAQYVSPELLTE 209
Query: 551 SGYGVKIDVWAAGVILYILLCGFPPFVSDTNDQDELFDDILSGQYGFPSPYWDDISEEAK 610
D+WA G I+Y L+ G PPF + ++ +F I+ +Y FP ++ +A+
Sbjct: 210 KSACKSSDLWALGCIIYQLVAGLPPFRA--GNEYLIFQKIIKLEYDFPEKFFP----KAR 263
Query: 611 ELISHMLESNPDLRFSAEDVLD------HPWLE 637
+L+ +L + R E++ HP+ E
Sbjct: 264 DLVEKLLVLDATKRLGCEEMEGYGPLKAHPFFE 296
>pdb|3NAY|A Chain A, Pdk1 In Complex With Inhibitor Mp6
pdb|3NAY|B Chain B, Pdk1 In Complex With Inhibitor Mp6
Length = 311
Score = 130 bits (326), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 81/273 (29%), Positives = 142/273 (52%), Gaps = 25/273 (9%)
Query: 379 YSVGQIIGDGNFAVVRQVYDKHKDMDCALKIIDKSKLLGKKQM--IENEVNILRSVNHPN 436
+ G+I+G+G+F+ V + + A+KI++K ++ + ++ + E +++ ++HP
Sbjct: 31 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPF 90
Query: 437 IIKLLDEYDTNNELYLVIELIKGGDLFDAISKNVKFSEEDSKFMTQSLASALSYLHDNYI 496
+KL + + +LY + K G+L I K F E ++F T + SAL YLH I
Sbjct: 91 FVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKGI 150
Query: 497 VHRDIKPENLLVEMSGCHVKVLKVGDFGLAQRVLRP------MFTVCGTPTYVAPEILNE 550
+HRD+KPEN+L+ H+++ DFG A +VL P GT YV+PE+L E
Sbjct: 151 IHRDLKPENILLN-EDMHIQIT---DFGTA-KVLSPESKQARANXFVGTAQYVSPELLTE 205
Query: 551 SGYGVKIDVWAAGVILYILLCGFPPFVSDTNDQDELFDDILSGQYGFPSPYWDDISEEAK 610
D+WA G I+Y L+ G PPF + ++ +F I+ +Y FP ++ +A+
Sbjct: 206 KSACKSSDLWALGCIIYQLVAGLPPFRA--GNEYLIFQKIIKLEYDFPEKFFP----KAR 259
Query: 611 ELISHMLESNPDLRFSAEDVLD------HPWLE 637
+L+ +L + R E++ HP+ E
Sbjct: 260 DLVEKLLVLDATKRLGCEEMEGYGPLKAHPFFE 292
>pdb|3NUN|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Lead
Compound
Length = 292
Score = 130 bits (326), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 81/273 (29%), Positives = 142/273 (52%), Gaps = 25/273 (9%)
Query: 379 YSVGQIIGDGNFAVVRQVYDKHKDMDCALKIIDKSKLLGKKQM--IENEVNILRSVNHPN 436
+ G+I+G+G+F+ V + + A+KI++K ++ + ++ + E +++ ++HP
Sbjct: 16 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPF 75
Query: 437 IIKLLDEYDTNNELYLVIELIKGGDLFDAISKNVKFSEEDSKFMTQSLASALSYLHDNYI 496
+KL + + +LY + K G+L I K F E ++F T + SAL YLH I
Sbjct: 76 FVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKGI 135
Query: 497 VHRDIKPENLLVEMSGCHVKVLKVGDFGLAQRVLRP------MFTVCGTPTYVAPEILNE 550
+HRD+KPEN+L+ H+++ DFG A +VL P GT YV+PE+L E
Sbjct: 136 IHRDLKPENILLN-EDMHIQIT---DFGTA-KVLSPESKQARANXFVGTAQYVSPELLTE 190
Query: 551 SGYGVKIDVWAAGVILYILLCGFPPFVSDTNDQDELFDDILSGQYGFPSPYWDDISEEAK 610
D+WA G I+Y L+ G PPF + ++ +F I+ +Y FP ++ +A+
Sbjct: 191 KSACKSSDLWALGCIIYQLVAGLPPFRA--GNEYLIFQKIIKLEYDFPEKFFP----KAR 244
Query: 611 ELISHMLESNPDLRFSAEDVLD------HPWLE 637
+L+ +L + R E++ HP+ E
Sbjct: 245 DLVEKLLVLDATKRLGCEEMEGYGPLKAHPFFE 277
>pdb|3PWY|A Chain A, Crystal Structure Of An Extender (Spd28345)-Modified Human
Pdk1 Complex 2
Length = 311
Score = 129 bits (325), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 81/273 (29%), Positives = 142/273 (52%), Gaps = 25/273 (9%)
Query: 379 YSVGQIIGDGNFAVVRQVYDKHKDMDCALKIIDKSKLLGKKQM--IENEVNILRSVNHPN 436
+ G+I+G+G+F+ V + + A+KI++K ++ + ++ + E +++ ++HP
Sbjct: 34 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPF 93
Query: 437 IIKLLDEYDTNNELYLVIELIKGGDLFDAISKNVKFSEEDSKFMTQSLASALSYLHDNYI 496
+KL + + +LY + K G L I K F E ++F T + SAL YLH I
Sbjct: 94 FVKLYFTFQDDEKLYFGLSYAKNGCLLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKGI 153
Query: 497 VHRDIKPENLLVEMSGCHVKVLKVGDFGLAQRVLRP------MFTVCGTPTYVAPEILNE 550
+HRD+KPEN+L+ H+++ DFG A +VL P + GT YV+PE+L E
Sbjct: 154 IHRDLKPENILLN-EDMHIQIT---DFGTA-KVLSPESKQARANSFVGTAQYVSPELLTE 208
Query: 551 SGYGVKIDVWAAGVILYILLCGFPPFVSDTNDQDELFDDILSGQYGFPSPYWDDISEEAK 610
D+WA G I+Y L+ G PPF + ++ +F I+ +Y FP ++ +A+
Sbjct: 209 KSASKSSDLWALGCIIYQLVAGLPPFRA--GNEYLIFQKIIKLEYDFPEKFFP----KAR 262
Query: 611 ELISHMLESNPDLRFSAEDVLD------HPWLE 637
+L+ +L + R E++ HP+ E
Sbjct: 263 DLVEKLLVLDATKRLGCEEMEGYGPLKAHPFFE 295
>pdb|4FR4|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|C Chain C, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|D Chain D, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|E Chain E, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|F Chain F, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
Length = 384
Score = 129 bits (324), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 82/267 (30%), Positives = 141/267 (52%), Gaps = 17/267 (6%)
Query: 379 YSVGQIIGDGNFAVVRQVYDKHKDMDCALKIIDKSKLLGKKQM--IENEVNILRSVNHPN 436
+ + + IG G+F V V A+K ++K K + + ++ + E+ I++ + HP
Sbjct: 17 FEILRAIGKGSFGKVCIVQKNDTKKMYAMKYMNKQKCVERNEVRNVFKELQIMQGLEHPF 76
Query: 437 IIKLLDEYDTNNELYLVIELIKGGDLFDAISKNVKFSEEDSKFMTQSLASALSYLHDNYI 496
++ L + ++++V++L+ GGDL + +NV F EE K L AL YL + I
Sbjct: 77 LVNLWYSFQDEEDMFMVVDLLLGGDLRYHLQQNVHFKEETVKLFICELVMALDYLQNQRI 136
Query: 497 VHRDIKPENLLVEMSGCHVKVLKVGDFGLAQRVLRP--MFTVCGTPTYVAPEILNE---S 551
+HRD+KP+N+L++ G HV + DF +A + R + T+ GT Y+APE+ + +
Sbjct: 137 IHRDMKPDNILLDEHG-HV---HITDFNIAAMLPRETQITTMAGTKPYMAPEMFSSRKGA 192
Query: 552 GYGVKIDVWAAGVILYILLCGFPPF-VSDTNDQDELFDDILSGQYGFPSPYWDDISEEAK 610
GY +D W+ GV Y LL G P+ + + E+ + +PS + S+E
Sbjct: 193 GYSFAVDWWSLGVTAYELLRGRRPYHIRSSTSSKEIVHTFETTVVTYPSAW----SQEMV 248
Query: 611 ELISHMLESNPDLRFSA-EDVLDHPWL 636
L+ +LE NPD RFS DV + P++
Sbjct: 249 SLLKKLLEPNPDQRFSQLSDVQNFPYM 275
>pdb|4FSY|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 129 bits (324), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 82/273 (30%), Positives = 133/273 (48%), Gaps = 19/273 (6%)
Query: 375 LLQRYSVGQIIGDGNFAVVRQVYDKHKDMDCALKIIDKSKLLGKKQMIENEVNILRSVNH 434
++ + + Q +G+G + V+ ++ + A+KI+D + + + I+ E+ I + +NH
Sbjct: 4 FVEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEIXINKMLNH 63
Query: 435 PNIIKLLDEYDTNNELYLVIELIKGGDLFDAISKNVKFSEEDSKFMTQSLASALSYLHDN 494
N++K N YL +E GG+LFD I ++ E D++ L + + YLH
Sbjct: 64 ENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGI 123
Query: 495 YIVHRDIKPENLLVEMSGCHVKVLKVGDFGLA--------QRVLRPMFTVCGTPTYVAPE 546
I HRDIKPENLL++ LK+ DFGLA +R+L M CGT YVAPE
Sbjct: 124 GITHRDIKPENLLLDERDN----LKISDFGLATVFRYNNRERLLNKM---CGTLPYVAPE 176
Query: 547 ILNESGYGVK-IDVWAAGVILYILLCGFPPFVSDTNDQDELFDDILSGQYGFPSPYWDDI 605
+L + + +DVW+ G++L +L G P+ ++ E D Y P W I
Sbjct: 177 LLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTYLNP---WKKI 233
Query: 606 SEEAKELISHMLESNPDLRFSAEDVLDHPWLER 638
L+ +L NP R + D+ W +
Sbjct: 234 DSAPLALLHKILVENPSARITIPDIKKDRWYNK 266
>pdb|2HOG|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 20
pdb|2HXL|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1
pdb|2HXQ|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2
pdb|2HY0|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 22
pdb|3F9N|A Chain A, Crystal Structure Of Chk1 Kinase In Complex With Inhibitor
38
Length = 322
Score = 129 bits (324), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 82/273 (30%), Positives = 133/273 (48%), Gaps = 19/273 (6%)
Query: 375 LLQRYSVGQIIGDGNFAVVRQVYDKHKDMDCALKIIDKSKLLGKKQMIENEVNILRSVNH 434
++ + + Q +G+G + V+ ++ + A+KI+D + + + I+ E+ I + +NH
Sbjct: 4 FVEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNH 63
Query: 435 PNIIKLLDEYDTNNELYLVIELIKGGDLFDAISKNVKFSEEDSKFMTQSLASALSYLHDN 494
N++K N YL +E GG+LFD I ++ E D++ L + + YLH
Sbjct: 64 ENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGI 123
Query: 495 YIVHRDIKPENLLVEMSGCHVKVLKVGDFGLA--------QRVLRPMFTVCGTPTYVAPE 546
I HRDIKPENLL++ LK+ DFGLA +R+L M CGT YVAPE
Sbjct: 124 GITHRDIKPENLLLD----ERDNLKISDFGLATVFRYNNRERLLNKM---CGTLPYVAPE 176
Query: 547 ILNESGYGVK-IDVWAAGVILYILLCGFPPFVSDTNDQDELFDDILSGQYGFPSPYWDDI 605
+L + + +DVW+ G++L +L G P+ ++ E D Y P W I
Sbjct: 177 LLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTYLNP---WKKI 233
Query: 606 SEEAKELISHMLESNPDLRFSAEDVLDHPWLER 638
L+ +L NP R + D+ W +
Sbjct: 234 DSAPLALLHKILVENPSARITIPDIKKDRWYNK 266
>pdb|2R0U|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 54
pdb|2QHM|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2a
pdb|2QHN|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1a
pdb|3TKH|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S01
pdb|3TKI|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S25
Length = 323
Score = 129 bits (324), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 82/273 (30%), Positives = 133/273 (48%), Gaps = 19/273 (6%)
Query: 375 LLQRYSVGQIIGDGNFAVVRQVYDKHKDMDCALKIIDKSKLLGKKQMIENEVNILRSVNH 434
++ + + Q +G+G + V+ ++ + A+KI+D + + + I+ E+ I + +NH
Sbjct: 5 FVEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNH 64
Query: 435 PNIIKLLDEYDTNNELYLVIELIKGGDLFDAISKNVKFSEEDSKFMTQSLASALSYLHDN 494
N++K N YL +E GG+LFD I ++ E D++ L + + YLH
Sbjct: 65 ENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGI 124
Query: 495 YIVHRDIKPENLLVEMSGCHVKVLKVGDFGLA--------QRVLRPMFTVCGTPTYVAPE 546
I HRDIKPENLL++ LK+ DFGLA +R+L M CGT YVAPE
Sbjct: 125 GITHRDIKPENLLLD----ERDNLKISDFGLATVFRYNNRERLLNKM---CGTLPYVAPE 177
Query: 547 ILNESGYGVK-IDVWAAGVILYILLCGFPPFVSDTNDQDELFDDILSGQYGFPSPYWDDI 605
+L + + +DVW+ G++L +L G P+ ++ E D Y P W I
Sbjct: 178 LLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTYLNP---WKKI 234
Query: 606 SEEAKELISHMLESNPDLRFSAEDVLDHPWLER 638
L+ +L NP R + D+ W +
Sbjct: 235 DSAPLALLHKILVENPSARITIPDIKKDRWYNK 267
>pdb|4FSN|A Chain A, Crystal Structure Of The Chk1
Length = 278
Score = 129 bits (323), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 82/275 (29%), Positives = 134/275 (48%), Gaps = 19/275 (6%)
Query: 373 SKLLQRYSVGQIIGDGNFAVVRQVYDKHKDMDCALKIIDKSKLLGKKQMIENEVNILRSV 432
+ ++ + + Q +G+G + V+ ++ + A+KI+D + + + I+ E+ I + +
Sbjct: 1 APFVEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKML 60
Query: 433 NHPNIIKLLDEYDTNNELYLVIELIKGGDLFDAISKNVKFSEEDSKFMTQSLASALSYLH 492
NH N++K N YL +E GG+LFD I ++ E D++ L + + YLH
Sbjct: 61 NHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLH 120
Query: 493 DNYIVHRDIKPENLLVEMSGCHVKVLKVGDFGLA--------QRVLRPMFTVCGTPTYVA 544
I HRDIKPENLL++ LK+ DFGLA +R+L M CGT YVA
Sbjct: 121 GIGITHRDIKPENLLLDERDN----LKISDFGLATVFRYNNRERLLNKM---CGTLPYVA 173
Query: 545 PEILNESGYGVK-IDVWAAGVILYILLCGFPPFVSDTNDQDELFDDILSGQYGFPSPYWD 603
PE+L + + +DVW+ G++L +L G P+ ++ E D Y P W
Sbjct: 174 PELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTYLNP---WK 230
Query: 604 DISEEAKELISHMLESNPDLRFSAEDVLDHPWLER 638
I L+ +L NP R + D+ W +
Sbjct: 231 KIDSAPLALLHKILVENPSARITIPDIKKDRWYNK 265
>pdb|3ORX|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|E Chain E, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|F Chain F, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|G Chain G, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|H Chain H, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORZ|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3OTU|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator Js30
Length = 316
Score = 129 bits (323), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 81/273 (29%), Positives = 142/273 (52%), Gaps = 25/273 (9%)
Query: 379 YSVGQIIGDGNFAVVRQVYDKHKDMDCALKIIDKSKLLGKKQM--IENEVNILRSVNHPN 436
+ G+I+G+G+F+ V + + A+KI++K ++ + ++ + E +++ ++HP
Sbjct: 39 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPF 98
Query: 437 IIKLLDEYDTNNELYLVIELIKGGDLFDAISKNVKFSEEDSKFMTQSLASALSYLHDNYI 496
+KL + + +LY + K G+L I K F E ++F T + SAL YLH I
Sbjct: 99 FVKLYFCFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKGI 158
Query: 497 VHRDIKPENLLVEMSGCHVKVLKVGDFGLAQRVLRP------MFTVCGTPTYVAPEILNE 550
+HRD+KPEN+L+ H+++ DFG A +VL P GT YV+PE+L E
Sbjct: 159 IHRDLKPENILLN-EDMHIQIT---DFGTA-KVLSPESKQARANXFVGTAQYVSPELLTE 213
Query: 551 SGYGVKIDVWAAGVILYILLCGFPPFVSDTNDQDELFDDILSGQYGFPSPYWDDISEEAK 610
D+WA G I+Y L+ G PPF + ++ +F I+ +Y FP ++ +A+
Sbjct: 214 KSACKSSDLWALGCIIYQLVAGLPPFRA--GNEYLIFQKIIKLEYDFPEKFFP----KAR 267
Query: 611 ELISHMLESNPDLRFSAEDVLD------HPWLE 637
+L+ +L + R E++ HP+ E
Sbjct: 268 DLVEKLLVLDATKRLGCEEMEGYGPLKAHPFFE 300
>pdb|2BR1|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRB|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRG|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRH|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRM|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRN|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRO|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2C3J|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3K|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3L|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2CGU|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGV|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGW|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGX|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|3NLB|A Chain A, Novel Kinase Profile Highlights The Temporal Basis Of
Context Dependent Checkpoint Pathways To Cell Death
Length = 297
Score = 129 bits (323), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 82/273 (30%), Positives = 133/273 (48%), Gaps = 19/273 (6%)
Query: 375 LLQRYSVGQIIGDGNFAVVRQVYDKHKDMDCALKIIDKSKLLGKKQMIENEVNILRSVNH 434
++ + + Q +G+G + V+ ++ + A+KI+D + + + I+ E+ I + +NH
Sbjct: 5 FVEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNH 64
Query: 435 PNIIKLLDEYDTNNELYLVIELIKGGDLFDAISKNVKFSEEDSKFMTQSLASALSYLHDN 494
N++K N YL +E GG+LFD I ++ E D++ L + + YLH
Sbjct: 65 ENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGI 124
Query: 495 YIVHRDIKPENLLVEMSGCHVKVLKVGDFGLA--------QRVLRPMFTVCGTPTYVAPE 546
I HRDIKPENLL++ LK+ DFGLA +R+L M CGT YVAPE
Sbjct: 125 GITHRDIKPENLLLDER----DNLKISDFGLATVFRYNNRERLLNKM---CGTLPYVAPE 177
Query: 547 ILNESGYGVK-IDVWAAGVILYILLCGFPPFVSDTNDQDELFDDILSGQYGFPSPYWDDI 605
+L + + +DVW+ G++L +L G P+ ++ E D Y P W I
Sbjct: 178 LLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTYLNP---WKKI 234
Query: 606 SEEAKELISHMLESNPDLRFSAEDVLDHPWLER 638
L+ +L NP R + D+ W +
Sbjct: 235 DSAPLALLHKILVENPSARITIPDIKKDRWYNK 267
>pdb|1IA8|A Chain A, The 1.7 A Crystal Structure Of Human Cell Cycle Checkpoint
Kinase Chk1
pdb|1NVQ|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1UCN-01
pdb|1NVR|A Chain A, The Complex Structure Of Checkpoint Kinase
Chk1STAUROSPORINE
pdb|1NVS|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1SB218078
pdb|2WMQ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMR|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMS|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMT|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMU|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMV|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMX|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMW|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEY|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XF0|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEZ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2X8D|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2X8I|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YM3|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM4|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM5|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM6|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM7|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM8|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YDI|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 289
Score = 129 bits (323), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 82/273 (30%), Positives = 133/273 (48%), Gaps = 19/273 (6%)
Query: 375 LLQRYSVGQIIGDGNFAVVRQVYDKHKDMDCALKIIDKSKLLGKKQMIENEVNILRSVNH 434
++ + + Q +G+G + V+ ++ + A+KI+D + + + I+ E+ I + +NH
Sbjct: 5 FVEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNH 64
Query: 435 PNIIKLLDEYDTNNELYLVIELIKGGDLFDAISKNVKFSEEDSKFMTQSLASALSYLHDN 494
N++K N YL +E GG+LFD I ++ E D++ L + + YLH
Sbjct: 65 ENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGI 124
Query: 495 YIVHRDIKPENLLVEMSGCHVKVLKVGDFGLA--------QRVLRPMFTVCGTPTYVAPE 546
I HRDIKPENLL++ LK+ DFGLA +R+L M CGT YVAPE
Sbjct: 125 GITHRDIKPENLLLDER----DNLKISDFGLATVFRYNNRERLLNKM---CGTLPYVAPE 177
Query: 547 ILNESGYGVK-IDVWAAGVILYILLCGFPPFVSDTNDQDELFDDILSGQYGFPSPYWDDI 605
+L + + +DVW+ G++L +L G P+ ++ E D Y P W I
Sbjct: 178 LLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTYLNP---WKKI 234
Query: 606 SEEAKELISHMLESNPDLRFSAEDVLDHPWLER 638
L+ +L NP R + D+ W +
Sbjct: 235 DSAPLALLHKILVENPSARITIPDIKKDRWYNK 267
>pdb|4FSM|A Chain A, Crystal Structure Of The Chk1
pdb|4FSQ|A Chain A, Crystal Structure Of The Chk1
pdb|4FSR|A Chain A, Crystal Structure Of The Chk1
pdb|4FT0|A Chain A, Crystal Structure Of The Chk1
pdb|4FT5|A Chain A, Crystal Structure Of The Chk1
pdb|4FT7|A Chain A, Crystal Structure Of The Chk1
pdb|4FT9|A Chain A, Crystal Structure Of The Chk1
pdb|4FTI|A Chain A, Crystal Structure Of The Chk1
pdb|4FTJ|A Chain A, Crystal Structure Of The Chk1
pdb|4FTK|A Chain A, Crystal Structure Of The Chk1
pdb|4FTL|A Chain A, Crystal Structure Of The Chk1
pdb|4FTM|A Chain A, Crystal Structure Of The Chk1
pdb|4FTO|A Chain A, Crystal Structure Of The Chk1
pdb|4FTR|A Chain A, Crystal Structure Of The Chk1
pdb|4FTT|A Chain A, Crystal Structure Of The Chk1
pdb|4FTU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 129 bits (323), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 82/273 (30%), Positives = 133/273 (48%), Gaps = 19/273 (6%)
Query: 375 LLQRYSVGQIIGDGNFAVVRQVYDKHKDMDCALKIIDKSKLLGKKQMIENEVNILRSVNH 434
++ + + Q +G+G + V+ ++ + A+KI+D + + + I+ E+ I + +NH
Sbjct: 4 FVEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNH 63
Query: 435 PNIIKLLDEYDTNNELYLVIELIKGGDLFDAISKNVKFSEEDSKFMTQSLASALSYLHDN 494
N++K N YL +E GG+LFD I ++ E D++ L + + YLH
Sbjct: 64 ENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGI 123
Query: 495 YIVHRDIKPENLLVEMSGCHVKVLKVGDFGLA--------QRVLRPMFTVCGTPTYVAPE 546
I HRDIKPENLL++ LK+ DFGLA +R+L M CGT YVAPE
Sbjct: 124 GITHRDIKPENLLLDERDN----LKISDFGLATVFRYNNRERLLNKM---CGTLPYVAPE 176
Query: 547 ILNESGYGVK-IDVWAAGVILYILLCGFPPFVSDTNDQDELFDDILSGQYGFPSPYWDDI 605
+L + + +DVW+ G++L +L G P+ ++ E D Y P W I
Sbjct: 177 LLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTYLNP---WKKI 233
Query: 606 SEEAKELISHMLESNPDLRFSAEDVLDHPWLER 638
L+ +L NP R + D+ W +
Sbjct: 234 DSAPLALLHKILVENPSARITIPDIKKDRWYNK 266
>pdb|1ZLT|A Chain A, Crystal Structure Of Chk1 Complexed With A Hymenaldisine
Analog
pdb|2GDO|A Chain A, 4-(aminoalkylamino)-3-benzimidazole-quinolinones As Potent
Chk1 Inhibitors
Length = 295
Score = 129 bits (323), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 82/273 (30%), Positives = 133/273 (48%), Gaps = 19/273 (6%)
Query: 375 LLQRYSVGQIIGDGNFAVVRQVYDKHKDMDCALKIIDKSKLLGKKQMIENEVNILRSVNH 434
++ + + Q +G+G + V+ ++ + A+KI+D + + + I+ E+ I + +NH
Sbjct: 5 FVEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNH 64
Query: 435 PNIIKLLDEYDTNNELYLVIELIKGGDLFDAISKNVKFSEEDSKFMTQSLASALSYLHDN 494
N++K N YL +E GG+LFD I ++ E D++ L + + YLH
Sbjct: 65 ENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGI 124
Query: 495 YIVHRDIKPENLLVEMSGCHVKVLKVGDFGLA--------QRVLRPMFTVCGTPTYVAPE 546
I HRDIKPENLL++ LK+ DFGLA +R+L M CGT YVAPE
Sbjct: 125 GITHRDIKPENLLLDER----DNLKISDFGLATVFRYNNRERLLNKM---CGTLPYVAPE 177
Query: 547 ILNESGYGVK-IDVWAAGVILYILLCGFPPFVSDTNDQDELFDDILSGQYGFPSPYWDDI 605
+L + + +DVW+ G++L +L G P+ ++ E D Y P W I
Sbjct: 178 LLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTYLNP---WKKI 234
Query: 606 SEEAKELISHMLESNPDLRFSAEDVLDHPWLER 638
L+ +L NP R + D+ W +
Sbjct: 235 DSAPLALLHKILVENPSARITIPDIKKDRWYNK 267
>pdb|2XCK|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 128 bits (322), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 80/273 (29%), Positives = 141/273 (51%), Gaps = 25/273 (9%)
Query: 379 YSVGQIIGDGNFAVVRQVYDKHKDMDCALKIIDKSKLLGKKQM--IENEVNILRSVNHPN 436
+ G+I+G+G+F+ + + A+KI++K ++ + ++ + E +++ ++HP
Sbjct: 32 FKFGKILGEGSFSTTVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPF 91
Query: 437 IIKLLDEYDTNNELYLVIELIKGGDLFDAISKNVKFSEEDSKFMTQSLASALSYLHDNYI 496
+KL + + +LY + K G+L I K F E ++F T + SAL YLH I
Sbjct: 92 FVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKGI 151
Query: 497 VHRDIKPENLLVEMSGCHVKVLKVGDFGLAQRVLRP------MFTVCGTPTYVAPEILNE 550
+HRD+KPEN+L+ H+++ DFG A +VL P GT YV+PE+L E
Sbjct: 152 IHRDLKPENILLN-EDMHIQIT---DFGTA-KVLSPESKQARANXFVGTAQYVSPELLTE 206
Query: 551 SGYGVKIDVWAAGVILYILLCGFPPFVSDTNDQDELFDDILSGQYGFPSPYWDDISEEAK 610
D+WA G I+Y L+ G PPF + ++ +F I+ +Y FP ++ +A+
Sbjct: 207 KSACKSSDLWALGCIIYQLVAGLPPFRA--GNEYLIFQKIIKLEYDFPEKFFP----KAR 260
Query: 611 ELISHMLESNPDLRFSAEDVLD------HPWLE 637
+L+ +L + R E++ HP+ E
Sbjct: 261 DLVEKLLVLDATKRLGCEEMEGYGPLKAHPFFE 293
>pdb|2X8E|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YER|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YEX|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YDK|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 128 bits (322), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 82/273 (30%), Positives = 133/273 (48%), Gaps = 19/273 (6%)
Query: 375 LLQRYSVGQIIGDGNFAVVRQVYDKHKDMDCALKIIDKSKLLGKKQMIENEVNILRSVNH 434
++ + + Q +G+G + V+ ++ + A+KI+D + + + I+ E+ I + +NH
Sbjct: 5 FVEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNH 64
Query: 435 PNIIKLLDEYDTNNELYLVIELIKGGDLFDAISKNVKFSEEDSKFMTQSLASALSYLHDN 494
N++K N YL +E GG+LFD I ++ E D++ L + + YLH
Sbjct: 65 ENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGI 124
Query: 495 YIVHRDIKPENLLVEMSGCHVKVLKVGDFGLA--------QRVLRPMFTVCGTPTYVAPE 546
I HRDIKPENLL++ LK+ DFGLA +R+L M CGT YVAPE
Sbjct: 125 GITHRDIKPENLLLDERDN----LKISDFGLATVFRYNNRERLLNKM---CGTLPYVAPE 177
Query: 547 ILNESGYGVK-IDVWAAGVILYILLCGFPPFVSDTNDQDELFDDILSGQYGFPSPYWDDI 605
+L + + +DVW+ G++L +L G P+ ++ E D Y P W I
Sbjct: 178 LLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTYLNP---WKKI 234
Query: 606 SEEAKELISHMLESNPDLRFSAEDVLDHPWLER 638
L+ +L NP R + D+ W +
Sbjct: 235 DSAPLALLHKILVENPSARITIPDIKKDRWYNK 267
>pdb|3JVR|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
pdb|3JVS|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
Length = 271
Score = 128 bits (321), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 82/273 (30%), Positives = 133/273 (48%), Gaps = 19/273 (6%)
Query: 375 LLQRYSVGQIIGDGNFAVVRQVYDKHKDMDCALKIIDKSKLLGKKQMIENEVNILRSVNH 434
++ + + Q +G+G + V+ ++ + A+KI+D + + + I+ E+ I + +NH
Sbjct: 4 FVEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNH 63
Query: 435 PNIIKLLDEYDTNNELYLVIELIKGGDLFDAISKNVKFSEEDSKFMTQSLASALSYLHDN 494
N++K N YL +E GG+LFD I ++ E D++ L + + YLH
Sbjct: 64 ENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGI 123
Query: 495 YIVHRDIKPENLLVEMSGCHVKVLKVGDFGLA--------QRVLRPMFTVCGTPTYVAPE 546
I HRDIKPENLL++ LK+ DFGLA +R+L M CGT YVAPE
Sbjct: 124 GITHRDIKPENLLLDER----DNLKISDFGLATVFRYNNRERLLNKM---CGTLPYVAPE 176
Query: 547 ILNESGYGVK-IDVWAAGVILYILLCGFPPFVSDTNDQDELFDDILSGQYGFPSPYWDDI 605
+L + + +DVW+ G++L +L G P+ ++ E D Y P W I
Sbjct: 177 LLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTYLNP---WKKI 233
Query: 606 SEEAKELISHMLESNPDLRFSAEDVLDHPWLER 638
L+ +L NP R + D+ W +
Sbjct: 234 DSAPLALLHKILVENPSARITIPDIKKDRWYNK 266
>pdb|3OT3|A Chain A, X-Ray Crystal Structure Of Compound 22k Bound To Human
Chk1 Kinase Domain
pdb|3OT8|A Chain A, X-Ray Crystal Structure Of Compound 17r Bound To Human
Chk1 Kinase Domain
pdb|3PA3|A Chain A, X-Ray Crystal Structure Of Compound 70 Bound To Human Chk1
Kinase Domain
pdb|3PA4|A Chain A, X-Ray Crystal Structure Of Compound 2a Bound To Human Chk1
Kinase Domain
pdb|3PA5|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
pdb|3U9N|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
Length = 273
Score = 128 bits (321), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 82/273 (30%), Positives = 133/273 (48%), Gaps = 19/273 (6%)
Query: 375 LLQRYSVGQIIGDGNFAVVRQVYDKHKDMDCALKIIDKSKLLGKKQMIENEVNILRSVNH 434
++ + + Q +G+G + V+ ++ + A+KI+D + + + I+ E+ I + +NH
Sbjct: 4 FVEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNH 63
Query: 435 PNIIKLLDEYDTNNELYLVIELIKGGDLFDAISKNVKFSEEDSKFMTQSLASALSYLHDN 494
N++K N YL +E GG+LFD I ++ E D++ L + + YLH
Sbjct: 64 ENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGI 123
Query: 495 YIVHRDIKPENLLVEMSGCHVKVLKVGDFGLA--------QRVLRPMFTVCGTPTYVAPE 546
I HRDIKPENLL++ LK+ DFGLA +R+L M CGT YVAPE
Sbjct: 124 GITHRDIKPENLLLDERDN----LKISDFGLATVFRYNNRERLLNKM---CGTLPYVAPE 176
Query: 547 ILNESGYGVK-IDVWAAGVILYILLCGFPPFVSDTNDQDELFDDILSGQYGFPSPYWDDI 605
+L + + +DVW+ G++L +L G P+ ++ E D Y P W I
Sbjct: 177 LLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTYLNP---WKKI 233
Query: 606 SEEAKELISHMLESNPDLRFSAEDVLDHPWLER 638
L+ +L NP R + D+ W +
Sbjct: 234 DSAPLALLHKILVENPSARITIPDIKKDRWYNK 266
>pdb|2E9V|A Chain A, Structure Of H-Chk1 Complexed With A859017
pdb|2E9V|B Chain B, Structure Of H-Chk1 Complexed With A859017
Length = 268
Score = 128 bits (321), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 82/273 (30%), Positives = 133/273 (48%), Gaps = 19/273 (6%)
Query: 375 LLQRYSVGQIIGDGNFAVVRQVYDKHKDMDCALKIIDKSKLLGKKQMIENEVNILRSVNH 434
++ + + Q +G+G + V+ ++ + A+KI+D + + + I+ E+ I + +NH
Sbjct: 4 FVEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNH 63
Query: 435 PNIIKLLDEYDTNNELYLVIELIKGGDLFDAISKNVKFSEEDSKFMTQSLASALSYLHDN 494
N++K N YL +E GG+LFD I ++ E D++ L + + YLH
Sbjct: 64 ENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGI 123
Query: 495 YIVHRDIKPENLLVEMSGCHVKVLKVGDFGLA--------QRVLRPMFTVCGTPTYVAPE 546
I HRDIKPENLL++ LK+ DFGLA +R+L M CGT YVAPE
Sbjct: 124 GITHRDIKPENLLLDER----DNLKISDFGLATVFRYNNRERLLNKM---CGTLPYVAPE 176
Query: 547 ILNESGYGVK-IDVWAAGVILYILLCGFPPFVSDTNDQDELFDDILSGQYGFPSPYWDDI 605
+L + + +DVW+ G++L +L G P+ ++ E D Y P W I
Sbjct: 177 LLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTYLNP---WKKI 233
Query: 606 SEEAKELISHMLESNPDLRFSAEDVLDHPWLER 638
L+ +L NP R + D+ W +
Sbjct: 234 DSAPLALLHKILVENPSARITIPDIKKDRWYNK 266
>pdb|2GHG|A Chain A, H-Chk1 Complexed With A431994
pdb|2YWP|A Chain A, Crystal Structure Of Chk1 With A Urea Inhibitor
pdb|2E9N|A Chain A, Structure Of H-chk1 Complexed With A767085
pdb|2E9O|A Chain A, Structure Of H-Chk1 Complexed With Aa582939
pdb|2E9P|A Chain A, Structure Of H-Chk1 Complexed With A771129
pdb|2E9U|A Chain A, Structure Of H-Chk1 Complexed With A780125
Length = 269
Score = 128 bits (321), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 82/273 (30%), Positives = 133/273 (48%), Gaps = 19/273 (6%)
Query: 375 LLQRYSVGQIIGDGNFAVVRQVYDKHKDMDCALKIIDKSKLLGKKQMIENEVNILRSVNH 434
++ + + Q +G+G + V+ ++ + A+KI+D + + + I+ E+ I + +NH
Sbjct: 4 FVEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNH 63
Query: 435 PNIIKLLDEYDTNNELYLVIELIKGGDLFDAISKNVKFSEEDSKFMTQSLASALSYLHDN 494
N++K N YL +E GG+LFD I ++ E D++ L + + YLH
Sbjct: 64 ENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGI 123
Query: 495 YIVHRDIKPENLLVEMSGCHVKVLKVGDFGLA--------QRVLRPMFTVCGTPTYVAPE 546
I HRDIKPENLL++ LK+ DFGLA +R+L M CGT YVAPE
Sbjct: 124 GITHRDIKPENLLLDERDN----LKISDFGLATVFRYNNRERLLNKM---CGTLPYVAPE 176
Query: 547 ILNESGYGVK-IDVWAAGVILYILLCGFPPFVSDTNDQDELFDDILSGQYGFPSPYWDDI 605
+L + + +DVW+ G++L +L G P+ ++ E D Y P W I
Sbjct: 177 LLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTYLNP---WKKI 233
Query: 606 SEEAKELISHMLESNPDLRFSAEDVLDHPWLER 638
L+ +L NP R + D+ W +
Sbjct: 234 DSAPLALLHKILVENPSARITIPDIKKDRWYNK 266
>pdb|2AYP|A Chain A, Crystal Structure Of Chk1 With An Indol Inhibitor
Length = 269
Score = 128 bits (321), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 82/273 (30%), Positives = 133/273 (48%), Gaps = 19/273 (6%)
Query: 375 LLQRYSVGQIIGDGNFAVVRQVYDKHKDMDCALKIIDKSKLLGKKQMIENEVNILRSVNH 434
++ + + Q +G+G + V+ ++ + A+KI+D + + + I+ E+ I + +NH
Sbjct: 5 FVEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNH 64
Query: 435 PNIIKLLDEYDTNNELYLVIELIKGGDLFDAISKNVKFSEEDSKFMTQSLASALSYLHDN 494
N++K N YL +E GG+LFD I ++ E D++ L + + YLH
Sbjct: 65 ENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGI 124
Query: 495 YIVHRDIKPENLLVEMSGCHVKVLKVGDFGLA--------QRVLRPMFTVCGTPTYVAPE 546
I HRDIKPENLL++ LK+ DFGLA +R+L M CGT YVAPE
Sbjct: 125 GITHRDIKPENLLLDERDN----LKISDFGLATVFRYNNRERLLNKM---CGTLPYVAPE 177
Query: 547 ILNESGYGVK-IDVWAAGVILYILLCGFPPFVSDTNDQDELFDDILSGQYGFPSPYWDDI 605
+L + + +DVW+ G++L +L G P+ ++ E D Y P W I
Sbjct: 178 LLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTYLNP---WKKI 234
Query: 606 SEEAKELISHMLESNPDLRFSAEDVLDHPWLER 638
L+ +L NP R + D+ W +
Sbjct: 235 DSAPLALLHKILVENPSARITIPDIKKDRWYNK 267
>pdb|3LM0|A Chain A, Crystal Structure Of Human SerineTHREONINE KINASE 17B
(STK17B)
pdb|3LM5|A Chain A, Crystal Structure Of Human SerineTHREONINE KINASE 17B
(STK17B) IN Complex With Quercetin
Length = 327
Score = 127 bits (320), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 82/261 (31%), Positives = 138/261 (52%), Gaps = 11/261 (4%)
Query: 385 IGDGNFAVVRQVYDKHKDMDCALKIIDKSKLLGK--KQMIENEVNILR-SVNHPNIIKLL 441
+G G FAVVRQ K + A K + K + G+ + I +E+ +L + + P +I L
Sbjct: 37 LGRGKFAVVRQCISKSTGQEYAAKFLKKRRR-GQDCRAEILHEIAVLELAKSCPRVINLH 95
Query: 442 DEYDTNNELYLVIELIKGGDLFDAISKNVK--FSEEDSKFMTQSLASALSYLHDNYIVHR 499
+ Y+ +E+ L++E GG++F + SE D + + + + YLH N IVH
Sbjct: 96 EVYENTSEIILILEYAAGGEIFSLCLPELAEMVSENDVIRLIKQILEGVYYLHQNNIVHL 155
Query: 500 DIKPENLLVEMSGCHVKVLKVGDFGLAQRVLRP--MFTVCGTPTYVAPEILNESGYGVKI 557
D+KP+N+L+ S + +K+ DFG+++++ + + GTP Y+APEILN
Sbjct: 156 DLKPQNILLS-SIYPLGDIKIVDFGMSRKIGHACELREIMGTPEYLAPEILNYDPITTAT 214
Query: 558 DVWAAGVILYILLCGFPPFVSDTNDQDELFDDILSGQYGFPSPYWDDISEEAKELISHML 617
D+W G+I Y+LL PFV + D E + +I + + +S+ A + I +L
Sbjct: 215 DMWNIGIIAYMLLTHTSPFVGE--DNQETYLNISQVNVDYSEETFSSVSQLATDFIQSLL 272
Query: 618 ESNPDLRFSAEDVLDHPWLER 638
NP+ R +AE L H WL++
Sbjct: 273 VKNPEKRPTAEICLSHSWLQQ 293
>pdb|2W5A|A Chain A, Human Nek2 Kinase Adp-Bound
pdb|2WQO|A Chain A, Structure Of Nek2 Bound To The Aminopyridine Cct241950
pdb|2XK3|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 35
pdb|2XK4|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 17
pdb|2XK6|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 36
pdb|2XK7|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 23
pdb|2XK8|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 15
pdb|2XKC|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 14
pdb|2XKD|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 12
pdb|2XKF|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 2
pdb|2XKE|A Chain A, Structure Of Nek2 Bound To Aminipyrazine Compound 5
pdb|2XNM|A Chain A, Structure Of Nek2 Bound To Cct
pdb|2XNN|A Chain A, Structure Of Nek2 Bound To Cct242430
pdb|2XNO|A Chain A, Structure Of Nek2 Bound To Cct243779
pdb|2XNP|A Chain A, Structure Of Nek2 Bound To Cct244858
pdb|4AFE|A Chain A, Nek2 Bound To Hybrid Compound 21
Length = 279
Score = 127 bits (320), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 97/284 (34%), Positives = 149/284 (52%), Gaps = 31/284 (10%)
Query: 371 IPSKLLQRYSVGQIIGDGNFAVVRQVYDKHKDMDCALKIIDKSKLL-GKKQMIENEVNIL 429
+PS+ + Y V IG G++ +++ K K +D + +KQM+ +EVN+L
Sbjct: 1 MPSRA-EDYEVLYTIGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLL 59
Query: 430 RSVNHPNIIKLLDEY--DTNNELYLVIELIKGGDLFDAISKNVKFSEE-DSKF----MTQ 482
R + HPNI++ D TN LY+V+E +GGDL I+K K + D +F MTQ
Sbjct: 60 RELKHPNIVRYYDRIIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQ 119
Query: 483 SLASALSYLH-----DNYIVHRDIKPENLLVEMSGCHVKVLKVGDFGLAQRVLRP----M 533
L AL H + ++HRD+KP N+ ++ + +K+GDFGLA R+L
Sbjct: 120 -LTLALKECHRRSDGGHTVLHRDLKPANVFLDGK----QNVKLGDFGLA-RILNHDTSFA 173
Query: 534 FTVCGTPTYVAPEILNESGYGVKIDVWAAGVILYILLCGFPPFVSDTNDQDELFDDILSG 593
T GTP Y++PE +N Y K D+W+ G +LY L PPF + + Q EL I G
Sbjct: 174 KTFVGTPYYMSPEQMNRMSYNEKSDIWSLGCLLYELCALMPPFTAFS--QKELAGKIREG 231
Query: 594 QY-GFPSPYWDDISEEAKELISHMLESNPDLRFSAEDVLDHPWL 636
++ P Y S+E E+I+ ML R S E++L++P +
Sbjct: 232 KFRRIPYRY----SDELNEIITRMLNLKDYHRPSVEEILENPLI 271
>pdb|4FSU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 127 bits (318), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 82/273 (30%), Positives = 132/273 (48%), Gaps = 19/273 (6%)
Query: 375 LLQRYSVGQIIGDGNFAVVRQVYDKHKDMDCALKIIDKSKLLGKKQMIENEVNILRSVNH 434
++ + + Q +G+G V+ ++ + A+KI+D + + + I+ E+ I + +NH
Sbjct: 4 FVEDWDLVQTLGEGAAGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNH 63
Query: 435 PNIIKLLDEYDTNNELYLVIELIKGGDLFDAISKNVKFSEEDSKFMTQSLASALSYLHDN 494
N++K N YL +E GG+LFD I ++ E D++ L + + YLH
Sbjct: 64 ENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGI 123
Query: 495 YIVHRDIKPENLLVEMSGCHVKVLKVGDFGLA--------QRVLRPMFTVCGTPTYVAPE 546
I HRDIKPENLL++ LK+ DFGLA +R+L M CGT YVAPE
Sbjct: 124 GITHRDIKPENLLLDERDN----LKISDFGLATVFRYNNRERLLNKM---CGTLPYVAPE 176
Query: 547 ILNESGYGVK-IDVWAAGVILYILLCGFPPFVSDTNDQDELFDDILSGQYGFPSPYWDDI 605
+L + + +DVW+ G++L +L G P+ ++ E D Y P W I
Sbjct: 177 LLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTYLNP---WKKI 233
Query: 606 SEEAKELISHMLESNPDLRFSAEDVLDHPWLER 638
L+ +L NP R + D+ W +
Sbjct: 234 DSAPLALLHKILVENPSARITIPDIKKDRWYNK 266
>pdb|1ZYS|A Chain A, Co-Crystal Structure Of Checkpoint Kinase Chk1 With A
Pyrrolo-Pyridine Inhibitor
Length = 273
Score = 127 bits (318), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 82/273 (30%), Positives = 132/273 (48%), Gaps = 19/273 (6%)
Query: 375 LLQRYSVGQIIGDGNFAVVRQVYDKHKDMDCALKIIDKSKLLGKKQMIENEVNILRSVNH 434
++ + + Q +G+G + V+ ++ + A+KI+D + + + I+ E+ I +NH
Sbjct: 5 FVEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINAMLNH 64
Query: 435 PNIIKLLDEYDTNNELYLVIELIKGGDLFDAISKNVKFSEEDSKFMTQSLASALSYLHDN 494
N++K N YL +E GG+LFD I ++ E D++ L + + YLH
Sbjct: 65 ENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGI 124
Query: 495 YIVHRDIKPENLLVEMSGCHVKVLKVGDFGLA--------QRVLRPMFTVCGTPTYVAPE 546
I HRDIKPENLL++ LK+ DFGLA +R+L M CGT YVAPE
Sbjct: 125 GITHRDIKPENLLLDER----DNLKISDFGLATVFRYNNRERLLNKM---CGTLPYVAPE 177
Query: 547 ILNESGYGVK-IDVWAAGVILYILLCGFPPFVSDTNDQDELFDDILSGQYGFPSPYWDDI 605
+L + + +DVW+ G++L +L G P+ ++ E D Y P W I
Sbjct: 178 LLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTYLNP---WKKI 234
Query: 606 SEEAKELISHMLESNPDLRFSAEDVLDHPWLER 638
L+ +L NP R + D+ W +
Sbjct: 235 DSAPLALLHKILVENPSARITIPDIKKDRWYNK 267
>pdb|2JAV|A Chain A, Human Kinase With Pyrrole-Indolinone Ligand
pdb|2W5B|A Chain A, Human Nek2 Kinase Atpgammas-bound
pdb|2W5H|A Chain A, Human Nek2 Kinase Apo
Length = 279
Score = 126 bits (316), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 96/284 (33%), Positives = 148/284 (52%), Gaps = 31/284 (10%)
Query: 371 IPSKLLQRYSVGQIIGDGNFAVVRQVYDKHKDMDCALKIIDKSKLL-GKKQMIENEVNIL 429
+PS+ + Y V IG G++ +++ K K +D + +KQM+ +EVN+L
Sbjct: 1 MPSRA-EDYEVLYTIGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLL 59
Query: 430 RSVNHPNIIKLLDEY--DTNNELYLVIELIKGGDLFDAISKNVKFSEE-DSKF----MTQ 482
R + HPNI++ D TN LY+V+E +GGDL I+K K + D +F MTQ
Sbjct: 60 RELKHPNIVRYYDRIIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQ 119
Query: 483 SLASALSYLH-----DNYIVHRDIKPENLLVEMSGCHVKVLKVGDFGLAQRVLRP----M 533
L AL H + ++HRD+KP N+ ++ + +K+GDFGLA R+L
Sbjct: 120 -LTLALKECHRRSDGGHTVLHRDLKPANVFLDGK----QNVKLGDFGLA-RILNHDTSFA 173
Query: 534 FTVCGTPTYVAPEILNESGYGVKIDVWAAGVILYILLCGFPPFVSDTNDQDELFDDILSG 593
GTP Y++PE +N Y K D+W+ G +LY L PPF + + Q EL I G
Sbjct: 174 KAFVGTPYYMSPEQMNRMSYNEKSDIWSLGCLLYELCALMPPFTAFS--QKELAGKIREG 231
Query: 594 QY-GFPSPYWDDISEEAKELISHMLESNPDLRFSAEDVLDHPWL 636
++ P Y S+E E+I+ ML R S E++L++P +
Sbjct: 232 KFRRIPYRY----SDELNEIITRMLNLKDYHRPSVEEILENPLI 271
>pdb|3IW4|A Chain A, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|B Chain B, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|C Chain C, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
Length = 360
Score = 125 bits (315), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 86/287 (29%), Positives = 142/287 (49%), Gaps = 23/287 (8%)
Query: 364 KRRENLNIPSKLLQRYSVGQIIGDGNFAVVRQVYDKHKDMDCALKIIDKSKLLGKKQ--- 420
+++ + N+ L ++ ++G G+F V K + A+KI+ K ++
Sbjct: 6 RKQPSNNLDRVKLTDFNFLMVLGKGSFGKVMLADRKGTEELYAIKILKKDVVIQDDDVEC 65
Query: 421 -MIENEVNILRSVNHPNIIKLLDEYDTNNELYLVIELIKGGDLFDAISKNVKFSEEDSKF 479
M+E V L P + +L + T + LY V+E + GGDL I + KF E + F
Sbjct: 66 TMVEKRVLALLD-KPPFLTQLHSCFQTVDRLYFVMEYVNGGDLMYHIQQVGKFKEPQAVF 124
Query: 480 MTQSLASALSYLHDNYIVHRDIKPENLLVEMSGCHVKVLKVGDFGLAQRVLRPMFTV--- 536
++ L +LH I++RD+K +N++++ G H+K+ DFG+ + + T
Sbjct: 125 YAAEISIGLFFLHKRGIIYRDLKLDNVMLDSEG-HIKI---ADFGMCKEHMMDGVTTREF 180
Query: 537 CGTPTYVAPEILNESGYGVKIDVWAAGVILYILLCGFPPFVSDTNDQDELFDDILSGQYG 596
CGTP Y+APEI+ YG +D WA GV+LY +L G PPF D D+DELF I+
Sbjct: 181 CGTPDYIAPEIIAYQPYGKSVDWWAYGVLLYEMLAGQPPF--DGEDEDELFQSIMEHNVS 238
Query: 597 FPSPYWDDISEEAKELISHMLESNPDLRFSA-----EDVLDHPWLER 638
+P +S+EA + ++ +P R DV +H + R
Sbjct: 239 YPK----SLSKEAVSICKGLMTKHPAKRLGCGPEGERDVREHAFFRR 281
>pdb|4A4X|A Chain A, Nek2-Ede Bound To Cct248662
Length = 279
Score = 125 bits (314), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 96/284 (33%), Positives = 148/284 (52%), Gaps = 31/284 (10%)
Query: 371 IPSKLLQRYSVGQIIGDGNFAVVRQVYDKHKDMDCALKIIDKSKLL-GKKQMIENEVNIL 429
+PS+ + Y V IG G++ +++ K K +D + +KQM+ +EVN+L
Sbjct: 1 MPSRA-EDYEVLYTIGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLL 59
Query: 430 RSVNHPNIIKLLDEY--DTNNELYLVIELIKGGDLFDAISKNVKFSEE-DSKF----MTQ 482
R + HPNI++ D TN LY+V+E +GGDL I+K K + D +F MTQ
Sbjct: 60 RELKHPNIVRYYDRIIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQ 119
Query: 483 SLASALSYLH-----DNYIVHRDIKPENLLVEMSGCHVKVLKVGDFGLAQRVLRP----M 533
L AL H + ++HRD+KP N+ ++ + +K+GDFGLA R+L
Sbjct: 120 -LTLALKECHRRSDGGHTVLHRDLKPANVFLDGK----QNVKLGDFGLA-RILNHDEDFA 173
Query: 534 FTVCGTPTYVAPEILNESGYGVKIDVWAAGVILYILLCGFPPFVSDTNDQDELFDDILSG 593
GTP Y++PE +N Y K D+W+ G +LY L PPF + + Q EL I G
Sbjct: 174 KEFVGTPYYMSPEQMNRMSYNEKSDIWSLGCLLYELCALMPPFTAFS--QKELAGKIREG 231
Query: 594 QY-GFPSPYWDDISEEAKELISHMLESNPDLRFSAEDVLDHPWL 636
++ P Y S+E E+I+ ML R S E++L++P +
Sbjct: 232 KFRRIPYRY----SDELNEIITRMLNLKDYHRPSVEEILENPLI 271
>pdb|4FT3|A Chain A, Crystal Structure Of The Chk1
pdb|4GH2|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 125 bits (313), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 81/273 (29%), Positives = 132/273 (48%), Gaps = 19/273 (6%)
Query: 375 LLQRYSVGQIIGDGNFAVVRQVYDKHKDMDCALKIIDKSKLLGKKQMIENEVNILRSVNH 434
++ + + Q +G+G + V+ ++ + A+KI+D + + + I+ E+ I + +NH
Sbjct: 4 FVEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNH 63
Query: 435 PNIIKLLDEYDTNNELYLVIELIKGGDLFDAISKNVKFSEEDSKFMTQSLASALSYLHDN 494
N++K N YL +E GG+LFD I ++ E D++ L + + YLH
Sbjct: 64 ENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGI 123
Query: 495 YIVHRDIKPENLLVEMSGCHVKVLKVGDFGLA--------QRVLRPMFTVCGTPTYVAPE 546
I HRDIKPENLL++ LK+ DFGLA +R+L M GT YVAPE
Sbjct: 124 GITHRDIKPENLLLDERDN----LKISDFGLATVFRYNNRERLLNKMX---GTLPYVAPE 176
Query: 547 ILNESGYGVK-IDVWAAGVILYILLCGFPPFVSDTNDQDELFDDILSGQYGFPSPYWDDI 605
+L + + +DVW+ G++L +L G P+ ++ E D Y P W I
Sbjct: 177 LLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSXQEYSDWKEKKTYLNP---WKKI 233
Query: 606 SEEAKELISHMLESNPDLRFSAEDVLDHPWLER 638
L+ +L NP R + D+ W +
Sbjct: 234 DSAPLALLHKILVENPSARITIPDIKKDRWYNK 266
>pdb|3V8S|A Chain A, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|B Chain B, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|C Chain C, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|D Chain D, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3TV7|A Chain A, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|B Chain B, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|C Chain C, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|D Chain D, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TWJ|A Chain A, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|B Chain B, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|C Chain C, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|D Chain D, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
Length = 410
Score = 125 bits (313), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 80/251 (31%), Positives = 132/251 (52%), Gaps = 17/251 (6%)
Query: 377 QRYSVGQIIGDGNFAVVRQVYDKHKDMDCALKIIDKSKLLGKKQ--MIENEVNILRSVNH 434
+ Y V ++IG G F V+ V K A+K++ K +++ + E +I+ N
Sbjct: 69 EDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANS 128
Query: 435 PNIIKLLDEYDTNNELYLVIELIKGGDLFDAISKNVKFSEEDSKFMTQSLASALSYLHDN 494
P +++L + + LY+V+E + GGDL + +S N E+ ++F T + AL +H
Sbjct: 129 PWVVQLFYAFQDDRYLYMVMEYMPGGDLVNLMS-NYDVPEKWARFYTAEVVLALDAIHSM 187
Query: 495 YIVHRDIKPENLLVEMSGCHVKVLKVGDFGLAQRVLRPMFTVC----GTPTYVAPEILNE 550
+HRD+KP+N+L++ SG LK+ DFG ++ + C GTP Y++PE+L
Sbjct: 188 GFIHRDVKPDNMLLDKSGH----LKLADFGTCMKMNKEGMVRCDTAVGTPDYISPEVLKS 243
Query: 551 SG----YGVKIDVWAAGVILYILLCGFPPFVSDTNDQDELFDDILSGQYGFPSPYWDDIS 606
G YG + D W+ GV LY +L G PF +D+ + I++ + P +DIS
Sbjct: 244 QGGDGYYGRECDWWSVGVFLYEMLVGDTPFYADS--LVGTYSKIMNHKNSLTFPDDNDIS 301
Query: 607 EEAKELISHML 617
+EAK LI L
Sbjct: 302 KEAKNLICAFL 312
>pdb|4FSZ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 124 bits (312), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 81/273 (29%), Positives = 132/273 (48%), Gaps = 19/273 (6%)
Query: 375 LLQRYSVGQIIGDGNFAVVRQVYDKHKDMDCALKIIDKSKLLGKKQMIENEVNILRSVNH 434
++ + + Q +G+G + V+ ++ + A+KI+D + + + I+ E+ I + +NH
Sbjct: 4 FVEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEIXINKMLNH 63
Query: 435 PNIIKLLDEYDTNNELYLVIELIKGGDLFDAISKNVKFSEEDSKFMTQSLASALSYLHDN 494
N++K N YL +E GG+LFD I ++ E D++ L + + YLH
Sbjct: 64 ENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGI 123
Query: 495 YIVHRDIKPENLLVEMSGCHVKVLKVGDFGLA--------QRVLRPMFTVCGTPTYVAPE 546
I HRDIKPENLL++ LK+ DFGLA +R+L M GT YVAPE
Sbjct: 124 GITHRDIKPENLLLDERDN----LKISDFGLATVFRYNNRERLLNKMX---GTLPYVAPE 176
Query: 547 ILNESGYGVK-IDVWAAGVILYILLCGFPPFVSDTNDQDELFDDILSGQYGFPSPYWDDI 605
+L + + +DVW+ G++L +L G P+ ++ E D Y P W I
Sbjct: 177 LLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTYLNP---WKKI 233
Query: 606 SEEAKELISHMLESNPDLRFSAEDVLDHPWLER 638
L+ +L NP R + D+ W +
Sbjct: 234 DSAPLALLHKILVENPSARITIPDIKKDRWYNK 266
>pdb|2V55|A Chain A, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
pdb|2V55|C Chain C, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
Length = 406
Score = 124 bits (312), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 83/266 (31%), Positives = 139/266 (52%), Gaps = 20/266 (7%)
Query: 362 TIKRRENLNIPSKLLQRYSVGQIIGDGNFAVVRQVYDKHKDMDCALKIIDKSKLLGKKQ- 420
TI + +L + + + Y V ++IG G F V+ V K A+K++ K +++ +
Sbjct: 62 TINKIRDLRMKA---EDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDS 118
Query: 421 -MIENEVNILRSVNHPNIIKLLDEYDTNNELYLVIELIKGGDLFDAISKNVKFSEEDSKF 479
E +I+ N P +++L + + LY+V+E + GGDL + +S N E+ ++F
Sbjct: 119 AFFWEERDIMAFANSPWVVQLFYAFQDDRYLYMVMEYMPGGDLVNLMS-NYDVPEKWARF 177
Query: 480 MTQSLASALSYLHDNYIVHRDIKPENLLVEMSGCHVKVLKVGDFGLAQRVLRPMFTVC-- 537
T + AL +H +HRD+KP+N+L++ SG LK+ DFG ++ + C
Sbjct: 178 YTAEVVLALDAIHSMGFIHRDVKPDNMLLDKSGH----LKLADFGTCMKMNKEGMVRCDT 233
Query: 538 --GTPTYVAPEILNESG----YGVKIDVWAAGVILYILLCGFPPFVSDTNDQDELFDDIL 591
GTP Y++PE+L G YG + D W+ GV LY +L G PF +D+ + I+
Sbjct: 234 AVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYADS--LVGTYSKIM 291
Query: 592 SGQYGFPSPYWDDISEEAKELISHML 617
+ + P +DIS+EAK LI L
Sbjct: 292 NHKNSLTFPDDNDISKEAKNLICAFL 317
>pdb|2ESM|A Chain A, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ESM|B Chain B, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ETK|A Chain A, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETK|B Chain B, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETR|A Chain A, Crystal Structure Of Rock I Bound To Y-27632
pdb|2ETR|B Chain B, Crystal Structure Of Rock I Bound To Y-27632
pdb|3D9V|A Chain A, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3D9V|B Chain B, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3NCZ|A Chain A, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|B Chain B, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|C Chain C, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|D Chain D, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NDM|A Chain A, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|B Chain B, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|C Chain C, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|D Chain D, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
Length = 415
Score = 124 bits (312), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 80/251 (31%), Positives = 132/251 (52%), Gaps = 17/251 (6%)
Query: 377 QRYSVGQIIGDGNFAVVRQVYDKHKDMDCALKIIDKSKLLGKKQ--MIENEVNILRSVNH 434
+ Y V ++IG G F V+ V K A+K++ K +++ + E +I+ N
Sbjct: 74 EDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANS 133
Query: 435 PNIIKLLDEYDTNNELYLVIELIKGGDLFDAISKNVKFSEEDSKFMTQSLASALSYLHDN 494
P +++L + + LY+V+E + GGDL + +S N E+ ++F T + AL +H
Sbjct: 134 PWVVQLFYAFQDDRYLYMVMEYMPGGDLVNLMS-NYDVPEKWARFYTAEVVLALDAIHSM 192
Query: 495 YIVHRDIKPENLLVEMSGCHVKVLKVGDFGLAQRVLRPMFTVC----GTPTYVAPEILNE 550
+HRD+KP+N+L++ SG LK+ DFG ++ + C GTP Y++PE+L
Sbjct: 193 GFIHRDVKPDNMLLDKSGH----LKLADFGTCMKMNKEGMVRCDTAVGTPDYISPEVLKS 248
Query: 551 SG----YGVKIDVWAAGVILYILLCGFPPFVSDTNDQDELFDDILSGQYGFPSPYWDDIS 606
G YG + D W+ GV LY +L G PF +D+ + I++ + P +DIS
Sbjct: 249 QGGDGYYGRECDWWSVGVFLYEMLVGDTPFYADS--LVGTYSKIMNHKNSLTFPDDNDIS 306
Query: 607 EEAKELISHML 617
+EAK LI L
Sbjct: 307 KEAKNLICAFL 317
>pdb|1F3M|C Chain C, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1F3M|D Chain D, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1YHW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With One Point
Mutations (K299r)
Length = 297
Score = 124 bits (312), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 74/264 (28%), Positives = 144/264 (54%), Gaps = 12/264 (4%)
Query: 377 QRYSVGQIIGDGNFAVVRQVYDKHKDMDCALKIIDKSKLLGKKQMIENEVNILRSVNHPN 436
++Y+ + IG G V D + A++ ++ + KK++I NE+ ++R +PN
Sbjct: 20 KKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQ-PKKELIINEILVMRENKNPN 78
Query: 437 IIKLLDEYDTNNELYLVIELIKGGDLFDAISKNVKFSEEDSKFMTQSLASALSYLHDNYI 496
I+ LD Y +EL++V+E + GG L D +++ E + + AL +LH N +
Sbjct: 79 IVNYLDSYLVGDELWVVMEYLAGGSLTDVVTETC-MDEGQIAAVCRECLQALEFLHSNQV 137
Query: 497 VHRDIKPENLLVEMSGCHVKVLKVGDFGLAQRVL---RPMFTVCGTPTYVAPEILNESGY 553
+HRDIK +N+L+ M G +K+ DFG ++ T+ GTP ++APE++ Y
Sbjct: 138 IHRDIKSDNILLGMDGS----VKLTDFGFCAQITPEQSKRSTMVGTPYWMAPEVVTRKAY 193
Query: 554 GVKIDVWAAGVILYILLCGFPPFVSDTNDQDELFDDILSGQYGFPSPYWDDISEEAKELI 613
G K+D+W+ G++ ++ G PP++++ N L+ +G +P + +S ++ +
Sbjct: 194 GPKVDIWSLGIMAIEMIEGEPPYLNE-NPLRALYLIATNGTPELQNP--EKLSAIFRDFL 250
Query: 614 SHMLESNPDLRFSAEDVLDHPWLE 637
+ L+ + + R SA+++L H +L+
Sbjct: 251 NRCLDMDVEKRGSAKELLQHQFLK 274
>pdb|2F57|A Chain A, Crystal Structure Of The Human P21-activated Kinase 5
pdb|2F57|B Chain B, Crystal Structure Of The Human P21-activated Kinase 5
Length = 317
Score = 124 bits (312), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 74/258 (28%), Positives = 144/258 (55%), Gaps = 16/258 (6%)
Query: 385 IGDGNFAVVRQVYDKHKDMDCALKIIDKSKLLGKKQMIENEVNILRSVNHPNIIKLLDEY 444
IG+G+ +V +KH A+K +D K +++++ NEV I+R +H N++ + Y
Sbjct: 53 IGEGSTGIVCIATEKHTGKQVAVKKMDLRKQ-QRRELLFNEVVIMRDYHHDNVVDMYSSY 111
Query: 445 DTNNELYLVIELIKGGDLFDAISKNVKFSEEDSKFMTQSLASALSYLHDNYIVHRDIKPE 504
+EL++V+E ++GG L D ++ + + +EE + S+ ALSYLH+ ++HRDIK +
Sbjct: 112 LVGDELWVVMEFLEGGALTDIVT-HTRMNEEQIATVCLSVLRALSYLHNQGVIHRDIKSD 170
Query: 505 NLLVEMSGCHVKVLKVGDFGLAQRVLRPM---FTVCGTPTYVAPEILNESGYGVKIDVWA 561
++L+ G +K+ DFG +V + + + GTP ++APE+++ YG ++D+W+
Sbjct: 171 SILLTSDG----RIKLSDFGFCAQVSKEVPKRKXLVGTPYWMAPEVISRLPYGTEVDIWS 226
Query: 562 AGVILYILLCGFPPFVSDTNDQDELFDDILSGQYGFPSPYWD--DISEEAKELISHMLES 619
G+++ ++ G PP+ ++ Q + + P D +S + + ML
Sbjct: 227 LGIMVIEMIDGEPPYFNEPPLQ-----AMRRIRDSLPPRVKDLHKVSSVLRGFLDLMLVR 281
Query: 620 NPDLRFSAEDVLDHPWLE 637
P R +A+++L HP+L+
Sbjct: 282 EPSQRATAQELLGHPFLK 299
>pdb|2YDJ|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
pdb|2YDJ|B Chain B, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 124 bits (311), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 81/273 (29%), Positives = 132/273 (48%), Gaps = 19/273 (6%)
Query: 375 LLQRYSVGQIIGDGNFAVVRQVYDKHKDMDCALKIIDKSKLLGKKQMIENEVNILRSVNH 434
++ + + Q +G+G + V+ ++ + A+KI+D + + + I+ E+ I + +NH
Sbjct: 5 FVEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEIXINKMLNH 64
Query: 435 PNIIKLLDEYDTNNELYLVIELIKGGDLFDAISKNVKFSEEDSKFMTQSLASALSYLHDN 494
N++K N YL +E GG+LFD I ++ E D++ L + + YLH
Sbjct: 65 ENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGI 124
Query: 495 YIVHRDIKPENLLVEMSGCHVKVLKVGDFGLA--------QRVLRPMFTVCGTPTYVAPE 546
I HRDIKPENLL++ LK+ DFGLA +R+L M GT YVAPE
Sbjct: 125 GITHRDIKPENLLLDERDN----LKISDFGLATVFRYNNRERLLNKMX---GTLPYVAPE 177
Query: 547 ILNESGYGVK-IDVWAAGVILYILLCGFPPFVSDTNDQDELFDDILSGQYGFPSPYWDDI 605
+L + + +DVW+ G++L +L G P+ ++ E D Y P W I
Sbjct: 178 LLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTYLNP---WKKI 234
Query: 606 SEEAKELISHMLESNPDLRFSAEDVLDHPWLER 638
L+ +L NP R + D+ W +
Sbjct: 235 DSAPLALLHKILVENPSARITIPDIKKDRWYNK 267
>pdb|4FSW|A Chain A, Crystal Structure Of The Chk1
pdb|4FTA|A Chain A, Crystal Structure Of The Chk1
pdb|4FTC|A Chain A, Crystal Structure Of The Chk1
pdb|4FTN|A Chain A, Crystal Structure Of The Chk1
pdb|4FTQ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 124 bits (311), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 81/273 (29%), Positives = 132/273 (48%), Gaps = 19/273 (6%)
Query: 375 LLQRYSVGQIIGDGNFAVVRQVYDKHKDMDCALKIIDKSKLLGKKQMIENEVNILRSVNH 434
++ + + Q +G+G + V+ ++ + A+KI+D + + + I+ E+ I + +NH
Sbjct: 4 FVEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNH 63
Query: 435 PNIIKLLDEYDTNNELYLVIELIKGGDLFDAISKNVKFSEEDSKFMTQSLASALSYLHDN 494
N++K N YL +E GG+LFD I ++ E D++ L + + YLH
Sbjct: 64 ENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGI 123
Query: 495 YIVHRDIKPENLLVEMSGCHVKVLKVGDFGLA--------QRVLRPMFTVCGTPTYVAPE 546
I HRDIKPENLL++ LK+ DFGLA +R+L M GT YVAPE
Sbjct: 124 GITHRDIKPENLLLDERDN----LKISDFGLATVFRYNNRERLLNKMX---GTLPYVAPE 176
Query: 547 ILNESGYGVK-IDVWAAGVILYILLCGFPPFVSDTNDQDELFDDILSGQYGFPSPYWDDI 605
+L + + +DVW+ G++L +L G P+ ++ E D Y P W I
Sbjct: 177 LLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTYLNP---WKKI 233
Query: 606 SEEAKELISHMLESNPDLRFSAEDVLDHPWLER 638
L+ +L NP R + D+ W +
Sbjct: 234 DSAPLALLHKILVENPSARITIPDIKKDRWYNK 266
>pdb|3FXZ|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Lambda-Fl172
pdb|3FY0|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Dw1
pdb|4DAW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With The Ruthenium
Phthalimide Complex
Length = 297
Score = 124 bits (311), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 74/264 (28%), Positives = 143/264 (54%), Gaps = 12/264 (4%)
Query: 377 QRYSVGQIIGDGNFAVVRQVYDKHKDMDCALKIIDKSKLLGKKQMIENEVNILRSVNHPN 436
++Y+ + IG G V D + A++ ++ + KK++I NE+ ++R +PN
Sbjct: 20 KKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQ-PKKELIINEILVMRENKNPN 78
Query: 437 IIKLLDEYDTNNELYLVIELIKGGDLFDAISKNVKFSEEDSKFMTQSLASALSYLHDNYI 496
I+ LD Y +EL++V+E + GG L D +++ E + + AL +LH N +
Sbjct: 79 IVNYLDSYLVGDELWVVMEYLAGGSLTDVVTETC-MDEGQIAAVCRECLQALEFLHSNQV 137
Query: 497 VHRDIKPENLLVEMSGCHVKVLKVGDFGLAQRVL---RPMFTVCGTPTYVAPEILNESGY 553
+HRDIK +N+L+ M G +K+ DFG ++ + GTP ++APE++ Y
Sbjct: 138 IHRDIKSDNILLGMDGS----VKLTDFGFCAQITPEQSKRSXMVGTPYWMAPEVVTRKAY 193
Query: 554 GVKIDVWAAGVILYILLCGFPPFVSDTNDQDELFDDILSGQYGFPSPYWDDISEEAKELI 613
G K+D+W+ G++ ++ G PP++++ N L+ +G +P + +S ++ +
Sbjct: 194 GPKVDIWSLGIMAIEMIEGEPPYLNE-NPLRALYLIATNGTPELQNP--EKLSAIFRDFL 250
Query: 614 SHMLESNPDLRFSAEDVLDHPWLE 637
+ LE + + R SA+++L H +L+
Sbjct: 251 NRCLEMDVEKRGSAKELLQHQFLK 274
>pdb|4FST|A Chain A, Crystal Structure Of The Chk1
Length = 269
Score = 124 bits (310), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 81/273 (29%), Positives = 132/273 (48%), Gaps = 19/273 (6%)
Query: 375 LLQRYSVGQIIGDGNFAVVRQVYDKHKDMDCALKIIDKSKLLGKKQMIENEVNILRSVNH 434
++ + + Q +G+G + V+ ++ + A+KI+D + + + I+ E+ I + +NH
Sbjct: 4 FVEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNH 63
Query: 435 PNIIKLLDEYDTNNELYLVIELIKGGDLFDAISKNVKFSEEDSKFMTQSLASALSYLHDN 494
N++K N YL +E GG+LFD I ++ E D++ L + + YLH
Sbjct: 64 ENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGI 123
Query: 495 YIVHRDIKPENLLVEMSGCHVKVLKVGDFGLA--------QRVLRPMFTVCGTPTYVAPE 546
I HRDIKPENLL++ LK+ DFGLA +R+L M GT YVAPE
Sbjct: 124 GITHRDIKPENLLLDERDN----LKISDFGLATVFRYNNRERLLNKMX---GTLPYVAPE 176
Query: 547 ILNESGYGVK-IDVWAAGVILYILLCGFPPFVSDTNDQDELFDDILSGQYGFPSPYWDDI 605
+L + + +DVW+ G++L +L G P+ ++ E D Y P W I
Sbjct: 177 LLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTYLNP---WKKI 233
Query: 606 SEEAKELISHMLESNPDLRFSAEDVLDHPWLER 638
L+ +L NP R + D+ W +
Sbjct: 234 DSAPLALLHKILVENPSARITIPDIKKDRWYNK 266
>pdb|3Q4Z|A Chain A, Structure Of Unphosphorylated Pak1 Kinase Domain
pdb|3Q4Z|B Chain B, Structure Of Unphosphorylated Pak1 Kinase Domain
Length = 306
Score = 123 bits (309), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 73/264 (27%), Positives = 144/264 (54%), Gaps = 12/264 (4%)
Query: 377 QRYSVGQIIGDGNFAVVRQVYDKHKDMDCALKIIDKSKLLGKKQMIENEVNILRSVNHPN 436
++Y+ + IG G V D + A++ ++ + KK++I NE+ ++R +PN
Sbjct: 21 KKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQ-PKKELIINEILVMRENKNPN 79
Query: 437 IIKLLDEYDTNNELYLVIELIKGGDLFDAISKNVKFSEEDSKFMTQSLASALSYLHDNYI 496
I+ LD Y +EL++V+E + GG L D +++ E + + AL +LH N +
Sbjct: 80 IVNYLDSYLVGDELWVVMEYLAGGSLTDVVTETC-MDEGQIAAVCRECLQALEFLHSNQV 138
Query: 497 VHRDIKPENLLVEMSGCHVKVLKVGDFGLAQRVL---RPMFTVCGTPTYVAPEILNESGY 553
+HR+IK +N+L+ M G +K+ DFG ++ T+ GTP ++APE++ Y
Sbjct: 139 IHRNIKSDNILLGMDGS----VKLTDFGFCAQITPEQSKRSTMVGTPYWMAPEVVTRKAY 194
Query: 554 GVKIDVWAAGVILYILLCGFPPFVSDTNDQDELFDDILSGQYGFPSPYWDDISEEAKELI 613
G K+D+W+ G++ ++ G PP++++ N L+ +G +P + +S ++ +
Sbjct: 195 GPKVDIWSLGIMAIEMIEGEPPYLNE-NPLRALYLIATNGTPELQNP--EKLSAIFRDFL 251
Query: 614 SHMLESNPDLRFSAEDVLDHPWLE 637
+ LE + + R SA++++ H +L+
Sbjct: 252 NRCLEMDVEKRGSAKELIQHQFLK 275
>pdb|3Q52|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain
pdb|3Q53|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain In Complex
With Atp
Length = 306
Score = 123 bits (308), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 73/264 (27%), Positives = 143/264 (54%), Gaps = 12/264 (4%)
Query: 377 QRYSVGQIIGDGNFAVVRQVYDKHKDMDCALKIIDKSKLLGKKQMIENEVNILRSVNHPN 436
++Y+ + IG G V D + A++ ++ + KK++I NE+ ++R +PN
Sbjct: 21 KKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQ-PKKELIINEILVMRENKNPN 79
Query: 437 IIKLLDEYDTNNELYLVIELIKGGDLFDAISKNVKFSEEDSKFMTQSLASALSYLHDNYI 496
I+ LD Y +EL++V+E + GG L D +++ E + + AL +LH N +
Sbjct: 80 IVNYLDSYLVGDELWVVMEYLAGGSLTDVVTETC-MDEGQIAAVCRECLQALEFLHSNQV 138
Query: 497 VHRDIKPENLLVEMSGCHVKVLKVGDFGLAQRVL---RPMFTVCGTPTYVAPEILNESGY 553
+HRDIK +N+L+ M G +K+ DFG ++ + GTP ++APE++ Y
Sbjct: 139 IHRDIKSDNILLGMDGS----VKLTDFGFCAQITPEQSKRSXMVGTPYWMAPEVVTRKAY 194
Query: 554 GVKIDVWAAGVILYILLCGFPPFVSDTNDQDELFDDILSGQYGFPSPYWDDISEEAKELI 613
G K+D+W+ G++ ++ G PP++++ N L+ +G +P + +S ++ +
Sbjct: 195 GPKVDIWSLGIMAIEMIEGEPPYLNE-NPLRALYLIATNGTPELQNP--EKLSAIFRDFL 251
Query: 614 SHMLESNPDLRFSAEDVLDHPWLE 637
+ LE + + R SA++++ H +L+
Sbjct: 252 NRCLEMDVEKRGSAKELIQHQFLK 275
>pdb|1YHV|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Two Point
Mutations (K299r, T423e)
pdb|2HY8|1 Chain 1, Pak1 Complex With St2001
Length = 297
Score = 122 bits (306), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 73/264 (27%), Positives = 143/264 (54%), Gaps = 12/264 (4%)
Query: 377 QRYSVGQIIGDGNFAVVRQVYDKHKDMDCALKIIDKSKLLGKKQMIENEVNILRSVNHPN 436
++Y+ + IG G V D + A++ ++ + KK++I NE+ ++R +PN
Sbjct: 20 KKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQ-PKKELIINEILVMRENKNPN 78
Query: 437 IIKLLDEYDTNNELYLVIELIKGGDLFDAISKNVKFSEEDSKFMTQSLASALSYLHDNYI 496
I+ LD Y +EL++V+E + GG L D +++ E + + AL +LH N +
Sbjct: 79 IVNYLDSYLVGDELWVVMEYLAGGSLTDVVTETC-MDEGQIAAVCRECLQALEFLHSNQV 137
Query: 497 VHRDIKPENLLVEMSGCHVKVLKVGDFGLAQRVL---RPMFTVCGTPTYVAPEILNESGY 553
+HRDIK +N+L+ M G +K+ DFG ++ + GTP ++APE++ Y
Sbjct: 138 IHRDIKSDNILLGMDGS----VKLTDFGFCAQITPEQSKRSEMVGTPYWMAPEVVTRKAY 193
Query: 554 GVKIDVWAAGVILYILLCGFPPFVSDTNDQDELFDDILSGQYGFPSPYWDDISEEAKELI 613
G K+D+W+ G++ ++ G PP++++ N L+ +G +P + +S ++ +
Sbjct: 194 GPKVDIWSLGIMAIEMIEGEPPYLNE-NPLRALYLIATNGTPELQNP--EKLSAIFRDFL 250
Query: 614 SHMLESNPDLRFSAEDVLDHPWLE 637
+ L+ + + R SA+++L H +L+
Sbjct: 251 NRCLDMDVEKRGSAKELLQHQFLK 274
>pdb|3PFQ|A Chain A, Crystal Structure And Allosteric Activation Of Protein
Kinase C Beta Ii
Length = 674
Score = 121 bits (304), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 85/284 (29%), Positives = 136/284 (47%), Gaps = 18/284 (6%)
Query: 351 TKTSVARCATATIKRRENLNIPSKLLQRYSVGQIIGDGNFAVVRQVYDKHKDMDCALKII 410
TK + A K N N L ++ ++G G+F V K D A+KI+
Sbjct: 315 TKAPEEKTANTISKFDNNGNRDRMKLTDFNFLMVLGKGSFGKVMLSERKGTDELYAVKIL 374
Query: 411 DKSKLLG----KKQMIENEVNILRSVNHPNIIKLLDEYDTNNELYLVIELIKGGDLFDAI 466
K ++ + M+E V L P + +L + T + LY V+E + GGDL I
Sbjct: 375 KKDVVIQDDDVECTMVEKRVLALPG-KPPFLTQLHSCFQTMDRLYFVMEYVNGGDLMYHI 433
Query: 467 SKNVKFSEEDSKFMTQSLASALSYLHDNYIVHRDIKPENLLVEMSGCHVKVLKVGDFGLA 526
+ +F E + F +A L +L I++RD+K +N++++ G H+K+ DFG+
Sbjct: 434 QQVGRFKEPHAVFYAAEIAIGLFFLQSKGIIYRDLKLDNVMLDSEG-HIKI---ADFGMC 489
Query: 527 QRVLRPMFTV---CGTPTYVAPEILNESGYGVKIDVWAAGVILYILLCGFPPFVSDTNDQ 583
+ + T CGTP Y+APEI+ YG +D WA GV+LY +L G PF + D+
Sbjct: 490 KENIWDGVTTKXFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPF--EGEDE 547
Query: 584 DELFDDILSGQYGFPSPYWDDISEEAKELISHMLESNPDLRFSA 627
DELF I+ +P +S+EA + ++ +P R
Sbjct: 548 DELFQSIMEHNVAYPK----SMSKEAVAICKGLMTKHPGKRLGC 587
>pdb|4APC|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4APC|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4B9D|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor.
pdb|4B9D|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor
Length = 350
Score = 121 bits (303), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 88/279 (31%), Positives = 141/279 (50%), Gaps = 19/279 (6%)
Query: 367 ENLNIPSKLLQRYSVGQIIGDGNFAVVRQVYDKHKDMDCALKIIDKSKLLGK-KQMIENE 425
ENL S +++Y Q IG+G+F V +K I+ S++ K ++ E
Sbjct: 16 ENLYFQS--MEKYVRLQKIGEGSFGKAILVKSTEDGRQYVIKEINISRMSSKEREESRRE 73
Query: 426 VNILRSVNHPNIIKLLDEYDTNNELYLVIELIKGGDLFDAIS--KNVKFSEEDSKFMTQS 483
V +L ++ HPNI++ + ++ N LY+V++ +GGDLF I+ K V F E+
Sbjct: 74 VAVLANMKHPNIVQYRESFEENGSLYIVMDYCEGGDLFKRINAQKGVLFQEDQILDWFVQ 133
Query: 484 LASALSYLHDNYIVHRDIKPENLLVEMSGCHVKVLKVGDFGLAQRVLRPMFTVC----GT 539
+ AL ++HD I+HRDIK +N+ + G +++GDFG+A RVL + GT
Sbjct: 134 ICLALKHVHDRKILHRDIKSQNIFLTKDG----TVQLGDFGIA-RVLNSTVELARACIGT 188
Query: 540 PTYVAPEILNESGYGVKIDVWAAGVILYILLCGFPPFVSDTNDQDELFDDILSGQYGFPS 599
P Y++PEI Y K D+WA G +LY L F + L I+SG FP
Sbjct: 189 PYYLSPEICENKPYNNKSDIWALGCVLYELCTLKHAF--EAGSMKNLVLKIISG--SFP- 243
Query: 600 PYWDDISEEAKELISHMLESNPDLRFSAEDVLDHPWLER 638
P S + + L+S + + NP R S +L+ ++ +
Sbjct: 244 PVSLHYSYDLRSLVSQLFKRNPRDRPSVNSILEKGFIAK 282
>pdb|2WTK|C Chain C, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
pdb|2WTK|F Chain F, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
Length = 305
Score = 119 bits (299), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 88/281 (31%), Positives = 143/281 (50%), Gaps = 27/281 (9%)
Query: 373 SKLLQRYSVGQIIGDGNFAVVRQVYDKHKDMDCALKIIDKSKLL---GKKQMIENEVNIL 429
+KL+ +Y +G ++G+G++ V++V D A+KI+ K KL + ++ E+ +L
Sbjct: 1 AKLIGKYLMGDLLGEGSYGKVKEVLDSETLCRRAVKILKKKKLRRIPNGEANVKKEIQLL 60
Query: 430 RSVNHPNIIKLLDEY--DTNNELYLVIELIKGG--DLFDAISKNVKFSEEDSKFMTQSLA 485
R + H N+I+L+D + ++Y+V+E G ++ D++ + +F + L
Sbjct: 61 RRLRHKNVIQLVDVLYNEEKQKMYMVMEYCVCGMQEMLDSVPEK-RFPVCQAHGYFCQLI 119
Query: 486 SALSYLHDNYIVHRDIKPENLLVEMSGCHVKVLKVGDFGLAQRVLRPMF------TVCGT 539
L YLH IVH+DIKP NLL+ G LK+ G+A+ L P T G+
Sbjct: 120 DGLEYLHSQGIVHKDIKPGNLLLTTGG----TLKISALGVAE-ALHPFAADDTCRTSQGS 174
Query: 540 PTYVAPEILN--ESGYGVKIDVWAAGVILYILLCGFPPFVSDTNDQDELFDDILSGQYGF 597
P + PEI N ++ G K+D+W+AGV LY + G PF D + +LF++I G Y
Sbjct: 175 PAFQPPEIANGLDTFSGFKVDIWSAGVTLYNITTGLYPFEGD--NIYKLFENIGKGSYAI 232
Query: 598 PSPYWDDISEEAKELISHMLESNPDLRFSAEDVLDHPWLER 638
P D +L+ MLE P RFS + H W +
Sbjct: 233 PG----DCGPPLSDLLKGMLEYEPAKRFSIRQIRQHSWFRK 269
>pdb|2WQM|A Chain A, Structure Of Apo Human Nek7
pdb|2WQN|A Chain A, Structure Of Adp-Bound Human Nek7
Length = 310
Score = 119 bits (299), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 83/267 (31%), Positives = 135/267 (50%), Gaps = 17/267 (6%)
Query: 376 LQRYSVGQIIGDGNFAVVRQVYDKHKDMDCALKIIDKSKLLGKKQMIE--NEVNILRSVN 433
L + + + IG G F+ V + + ALK + L+ K + E+++L+ +N
Sbjct: 31 LANFRIEKKIGRGQFSEVYRAACLLDGVPVALKKVQIFDLMDAKARADCIKEIDLLKQLN 90
Query: 434 HPNIIKLLDEYDTNNELYLVIELIKGGDLFDAIS---KNVKFSEEDS--KFMTQSLASAL 488
HPN+IK + +NEL +V+EL GDL I K + E + K+ Q L SAL
Sbjct: 91 HPNVIKYYASFIEDNELNIVLELADAGDLSRMIKHFKKQKRLIPERTVWKYFVQ-LCSAL 149
Query: 489 SYLHDNYIVHRDIKPENLLVEMSGCHVKVLKVGDFGLAQ---RVLRPMFTVCGTPTYVAP 545
++H ++HRDIKP N+ + +G V+K+GD GL + ++ GTP Y++P
Sbjct: 150 EHMHSRRVMHRDIKPANVFITATG----VVKLGDLGLGRFFSSKTTAAHSLVGTPYYMSP 205
Query: 546 EILNESGYGVKIDVWAAGVILYILLCGFPPFVSDTNDQDELFDDILSGQYGFPSPYWDDI 605
E ++E+GY K D+W+ G +LY + PF D + L I Q +P D
Sbjct: 206 ERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDKMNLYSLCKKI--EQCDYPPLPSDHY 263
Query: 606 SEEAKELISHMLESNPDLRFSAEDVLD 632
SEE ++L++ + +P+ R V D
Sbjct: 264 SEELRQLVNMCINPDPEKRPDVTYVYD 290
>pdb|3DLS|A Chain A, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|B Chain B, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|C Chain C, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|D Chain D, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|E Chain E, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|F Chain F, Crystal Structure Of Human Pas Kinase Bound To Adp
Length = 335
Score = 119 bits (298), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 88/271 (32%), Positives = 137/271 (50%), Gaps = 27/271 (9%)
Query: 377 QRYSVGQIIGDGNFAVVRQVYDKHKDMDCALKIIDKSKLLG-------KKQMIENEVNIL 429
Q+YS +G G F V DK K+ + +K I K K+L K + E+ IL
Sbjct: 24 QKYSTMSPLGSGAFGFVWTAVDKEKNKEVVVKFIKKEKVLEDCWIEDPKLGKVTLEIAIL 83
Query: 430 RSVNHPNIIKLLDEYDTNNELYLVIELIKGG-DLFDAISKNVKFSEEDSKFMTQSLASAL 488
V H NIIK+LD ++ LV+E G DLF I ++ + E + ++ + L SA+
Sbjct: 84 SRVEHANIIKVLDIFENQGFFQLVMEKHGSGLDLFAFIDRHPRLDEPLASYIFRQLVSAV 143
Query: 489 SYLHDNYIVHRDIKPENLLVEMSGCHVKVLKVGDFGLAQRVLRP--MFTVCGTPTYVAPE 546
YL I+HRDIK EN+++ +K+ DFG A + R +T CGT Y APE
Sbjct: 144 GYLRLKDIIHRDIKDENIVI----AEDFTIKLIDFGSAAYLERGKLFYTFCGTIEYCAPE 199
Query: 547 ILNESGY-GVKIDVWAAGVILYILLCGFPPFVSDTNDQDELFDDILSGQYGFPSPYWDDI 605
+L + Y G ++++W+ GV LY L+ PF EL + + + PY +
Sbjct: 200 VLMGNPYRGPELEMWSLGVTLYTLVFEENPFC-------ELEETV---EAAIHPPYL--V 247
Query: 606 SEEAKELISHMLESNPDLRFSAEDVLDHPWL 636
S+E L+S +L+ P+ R + E ++ PW+
Sbjct: 248 SKELMSLVSGLLQPVPERRTTLEKLVTDPWV 278
>pdb|1VZO|A Chain A, The Structure Of The N-Terminal Kinase Domain Of Msk1
Reveals A Novel Autoinhibitory Conformation For A Dual
Kinase Protein
Length = 355
Score = 119 bits (297), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 80/283 (28%), Positives = 152/283 (53%), Gaps = 28/283 (9%)
Query: 376 LQRYSVGQIIGDGNFA---VVRQVYDKHKDMDCALKIIDKSKLLGKKQMIEN---EVNIL 429
++ + + +++G G + +VR++ A+K++ K+ ++ K + E+ E +L
Sbjct: 53 IENFELLKVLGTGAYGKVFLVRKISGHDTGKLYAMKVLKKATIVQKAKTTEHTRTERQVL 112
Query: 430 RSVNH-PNIIKLLDEYDTNNELYLVIELIKGGDLFDAISKNVKFSEEDSKFMTQSLASAL 488
+ P ++ L + T +L+L+++ I GG+LF +S+ +F+E + + + AL
Sbjct: 113 EHIRQSPFLVTLHYAFQTETKLHLILDYINGGELFTHLSQRERFTEHEVQIYVGEIVLAL 172
Query: 489 SYLHDNYIVHRDIKPENLLVEMSGCHVKVLKVGDFGLAQRVL----RPMFTVCGTPTYVA 544
+LH I++RDIK EN+L++ +G HV + DFGL++ + + CGT Y+A
Sbjct: 173 EHLHKLGIIYRDIKLENILLDSNG-HVVLT---DFGLSKEFVADETERAYDFCGTIEYMA 228
Query: 545 PEIL--NESGYGVKIDVWAAGVILYILLCGFPPFVSD--TNDQDELFDDILSGQYGFPSP 600
P+I+ +SG+ +D W+ GV++Y LL G PF D N Q E+ IL + P
Sbjct: 229 PDIVRGGDSGHDKAVDWWSLGVLMYELLTGASPFTVDGEKNSQAEISRRILKSE----PP 284
Query: 601 YWDDISEEAKELISHMLESNPDLRFS-----AEDVLDHPWLER 638
Y ++S AK+LI +L +P R A+++ +H + ++
Sbjct: 285 YPQEMSALAKDLIQRLLMKDPKKRLGCGPRDADEIKEHLFFQK 327
>pdb|2F2U|A Chain A, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2F2U|B Chain B, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2H9V|A Chain A, Structural Basis For Induced-Fit Binding Of Rho-Kinase To
The Inhibitor Y27632
Length = 402
Score = 118 bits (295), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 81/274 (29%), Positives = 140/274 (51%), Gaps = 21/274 (7%)
Query: 377 QRYSVGQIIGDGNFAVVRQVYDKHKDMDCALKIIDKSKLLGKKQ--MIENEVNILRSVNH 434
+ Y V ++IG G F V+ V K A+K++ K +++ + E +I+ N
Sbjct: 75 EDYDVVKVIGRGAFGEVQLVRHKASQKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANS 134
Query: 435 PNIIKLLDEYDTNNELYLVIELIKGGDLFDAISKNVKFSEEDSKFMTQSLASALSYLHDN 494
P +++L + + LY+V+E + GGDL + +S N E+ +KF T + AL +H
Sbjct: 135 PWVVQLFCAFQDDKYLYMVMEYMPGGDLVNLMS-NYDVPEKWAKFYTAEVVLALDAIHSM 193
Query: 495 YIVHRDIKPENLLVEMSGCHVKVLKVGDFGLAQRVLRPMFTVC----GTPTYVAPEILNE 550
++HRD+KP+N+L++ G LK+ DFG ++ C GTP Y++PE+L
Sbjct: 194 GLIHRDVKPDNMLLDKHGH----LKLADFGTCMKMDETGMVHCDTAVGTPDYISPEVLKS 249
Query: 551 SG----YGVKIDVWAAGVILYILLCGFPPFVSDTNDQDELFDDILSGQYGFPSPYWDDIS 606
G YG + D W+ GV L+ +L G PF +D+ + I+ + P +IS
Sbjct: 250 QGGDGYYGRECDWWSVGVFLFEMLVGDTPFYADS--LVGTYSKIMDHKNSLCFPEDAEIS 307
Query: 607 EEAKELISHMLESNPDLRF---SAEDVLDHPWLE 637
+ AK LI L ++ ++R E++ HP+ +
Sbjct: 308 KHAKNLICAFL-TDREVRLGRNGVEEIKQHPFFK 340
>pdb|2I0E|A Chain A, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
pdb|2I0E|B Chain B, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
Length = 353
Score = 118 bits (295), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 78/251 (31%), Positives = 126/251 (50%), Gaps = 18/251 (7%)
Query: 384 IIGDGNFAVVRQVYDKHKDMDCALKIIDKSKLLG----KKQMIENEVNILRSVNHPNIIK 439
++G G+F V K D A+KI+ K ++ + M+E V L P + +
Sbjct: 27 VLGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLALPG-KPPFLTQ 85
Query: 440 LLDEYDTNNELYLVIELIKGGDLFDAISKNVKFSEEDSKFMTQSLASALSYLHDNYIVHR 499
L + T + LY V+E + GGDL I + +F E + F +A L +L I++R
Sbjct: 86 LHSCFQTMDRLYFVMEYVNGGDLMYHIQQVGRFKEPHAVFYAAEIAIGLFFLQSKGIIYR 145
Query: 500 DIKPENLLVEMSGCHVKVLKVGDFGLAQRVLRPMFTV---CGTPTYVAPEILNESGYGVK 556
D+K +N++++ G H+K+ DFG+ + + T CGTP Y+APEI+ YG
Sbjct: 146 DLKLDNVMLDSEG-HIKI---ADFGMCKENIWDGVTTKXFCGTPDYIAPEIIAYQPYGKS 201
Query: 557 IDVWAAGVILYILLCGFPPFVSDTNDQDELFDDILSGQYGFPSPYWDDISEEAKELISHM 616
+D WA GV+LY +L G PF + D+DELF I+ +P +S+EA + +
Sbjct: 202 VDWWAFGVLLYEMLAGQAPF--EGEDEDELFQSIMEHNVAYPK----SMSKEAVAICKGL 255
Query: 617 LESNPDLRFSA 627
+ +P R
Sbjct: 256 MTKHPGKRLGC 266
>pdb|2IWI|A Chain A, Crystal Structure Of The Human Pim2 In Complex With A
Ruthenium Organometallic Ligand Ru1
pdb|2IWI|B Chain B, Crystal Structure Of The Human Pim2 In Complex With A
Ruthenium Organometallic Ligand Ru1
Length = 312
Score = 116 bits (290), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 78/270 (28%), Positives = 130/270 (48%), Gaps = 25/270 (9%)
Query: 379 YSVGQIIGDGNFAVVRQVYDKHKDMDCALKIIDKSKLLGKKQMIEN-----EVNILRSVN 433
Y +G ++G G F V + + A+K+I ++++LG + ++ EV +L V
Sbjct: 33 YRLGPLLGKGGFGTVFAGHRLTDRLQVAIKVIPRNRVLGWSPLSDSVTCPLEVALLWKVG 92
Query: 434 ----HPNIIKLLDEYDTNNELYLVIEL-IKGGDLFDAISKNVKFSEEDSKFMTQSLASAL 488
HP +I+LLD ++T LV+E + DLFD I++ E S+ + +A+
Sbjct: 93 AGGGHPGVIRLLDWFETQEGFMLVLERPLPAQDLFDYITEKGPLGEGPSRCFFGQVVAAI 152
Query: 489 SYLHDNYIVHRDIKPENLLVEMSGCHVKVLKVGDFGLAQRVLRPMFTVCGTPTYVAPEIL 548
+ H +VHRDIK EN+L+++ K++ G L P GT Y PE +
Sbjct: 153 QHCHSRGVVHRDIKDENILIDLRRGCAKLIDFGSGALLHD--EPYTDFDGTRVYSPPEWI 210
Query: 549 NESGY-GVKIDVWAAGVILYILLCGFPPFVSDTNDQDELFDDILSGQYGFPSPYWDDISE 607
+ Y + VW+ G++LY ++CG PF D +IL + FP+ +S
Sbjct: 211 SRHQYHALPATVWSLGILLYDMVCGDIPFERD--------QEILEAELHFPA----HVSP 258
Query: 608 EAKELISHMLESNPDLRFSAEDVLDHPWLE 637
+ LI L P R S E++L PW++
Sbjct: 259 DCCALIRRCLAPKPSSRPSLEEILLDPWMQ 288
>pdb|2JED|A Chain A, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution.
pdb|2JED|B Chain B, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution
Length = 352
Score = 115 bits (289), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 85/279 (30%), Positives = 135/279 (48%), Gaps = 20/279 (7%)
Query: 364 KRRENLNIPSKLLQRYSVGQIIGDGNFAVVRQVYDKHKDMDCALKIIDKSKLLGKKQ--- 420
K R +L I K+ + + + +++G G+F V K + A+K + K +L
Sbjct: 6 KERPSLQIKLKI-EDFELHKMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVEC 64
Query: 421 -MIENEVNILRSVNHPNIIKLLDEYDTNNELYLVIELIKGGDLFDAISKNVKFSEEDSKF 479
M+E V L + HP + + + T L+ V+E + GGDL I KF + F
Sbjct: 65 TMVEKRVLSL-AWEHPFLTHMFCTFQTKENLFFVMEYLNGGDLMYHIQSCHKFDLSRATF 123
Query: 480 MTQSLASALSYLHDNYIVHRDIKPENLLVEMSGCHVKVLKVGDFGLAQRVL---RPMFTV 536
+ L +LH IV+RD+K +N+L++ G H+ K+ DFG+ + +
Sbjct: 124 YAAEIILGLQFLHSKGIVYRDLKLDNILLDKDG-HI---KIADFGMCKENMLGDAKTNEF 179
Query: 537 CGTPTYVAPEILNESGYGVKIDVWAAGVILYILLCGFPPFVSDTNDQDELFDDILSGQYG 596
CGTP Y+APEIL Y +D W+ GV+LY +L G PF D++ELF I
Sbjct: 180 CGTPDYIAPEILLGQKYNHSVDWWSFGVLLYEMLIGQSPF--HGQDEEELFHSIRMDNPF 237
Query: 597 FPSPYWDDISEEAKELISHMLESNPDLRFSAE-DVLDHP 634
+P W + +EAK+L+ + P+ R D+ HP
Sbjct: 238 YPR--W--LEKEAKDLLVKLFVREPEKRLGVRGDIRQHP 272
>pdb|1XJD|A Chain A, Crystal Structure Of Pkc-Theta Complexed With
Staurosporine At 2a Resolution
Length = 345
Score = 115 bits (287), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 85/279 (30%), Positives = 135/279 (48%), Gaps = 20/279 (7%)
Query: 364 KRRENLNIPSKLLQRYSVGQIIGDGNFAVVRQVYDKHKDMDCALKIIDKSKLLGKKQ--- 420
K R +L I K+ + + + +++G G+F V K + A+K + K +L
Sbjct: 5 KERPSLQIKLKI-EDFILHKMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVEC 63
Query: 421 -MIENEVNILRSVNHPNIIKLLDEYDTNNELYLVIELIKGGDLFDAISKNVKFSEEDSKF 479
M+E V L + HP + + + T L+ V+E + GGDL I KF + F
Sbjct: 64 TMVEKRVLSL-AWEHPFLTHMFCTFQTKENLFFVMEYLNGGDLMYHIQSCHKFDLSRATF 122
Query: 480 MTQSLASALSYLHDNYIVHRDIKPENLLVEMSGCHVKVLKVGDFGLAQRVL---RPMFTV 536
+ L +LH IV+RD+K +N+L++ G H+ K+ DFG+ + +
Sbjct: 123 YAAEIILGLQFLHSKGIVYRDLKLDNILLDKDG-HI---KIADFGMCKENMLGDAKTNXF 178
Query: 537 CGTPTYVAPEILNESGYGVKIDVWAAGVILYILLCGFPPFVSDTNDQDELFDDILSGQYG 596
CGTP Y+APEIL Y +D W+ GV+LY +L G PF D++ELF I
Sbjct: 179 CGTPDYIAPEILLGQKYNHSVDWWSFGVLLYEMLIGQSPF--HGQDEEELFHSIRMDNPF 236
Query: 597 FPSPYWDDISEEAKELISHMLESNPDLRFSAE-DVLDHP 634
+P W + +EAK+L+ + P+ R D+ HP
Sbjct: 237 YPR--W--LEKEAKDLLVKLFVREPEKRLGVRGDIRQHP 271
>pdb|2CLQ|A Chain A, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
pdb|2CLQ|B Chain B, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
Length = 295
Score = 115 bits (287), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 80/264 (30%), Positives = 130/264 (49%), Gaps = 15/264 (5%)
Query: 384 IIGDGNFAVVRQVYDKHKDMDCALKIIDKSKLLGKKQMIENEVNILRSVNHPNIIKLLDE 443
++G G + +V D + A+K I + Q + E+ + + + H NI++ L
Sbjct: 29 VLGKGTYGIVYAGRDLSNQVRIAIKEIPERDSR-YSQPLHEEIALHKHLKHKNIVQYLGS 87
Query: 444 YDTNNELYLVIELIKGGDLFDAISKN---VKFSEEDSKFMTQSLASALSYLHDNYIVHRD 500
+ N + + +E + GG L + +K +E+ F T+ + L YLHDN IVHRD
Sbjct: 88 FSENGFIKIFMEQVPGGSLSALLRSKWGPLKDNEQTIGFYTKQILEGLKYLHDNQIVHRD 147
Query: 501 IKPENLLVEMSGCHVKVLKVGDFGLAQRV--LRPMF-TVCGTPTYVAPEILNES--GYGV 555
IK +N+L+ + VLK+ DFG ++R+ + P T GT Y+APEI+++ GYG
Sbjct: 148 IKGDNVLIN---TYSGVLKISDFGTSKRLAGINPCTETFTGTLQYMAPEIIDKGPRGYGK 204
Query: 556 KIDVWAAGVILYILLCGFPPFVSDTNDQDELFDDILSGQYGFPSPYWDDISEEAKELISH 615
D+W+ G + + G PPF Q +F G + + +S EAK I
Sbjct: 205 AADIWSLGCTIIEMATGKPPFYELGEPQAAMFK---VGMFKVHPEIPESMSAEAKAFILK 261
Query: 616 MLESNPDLRFSAEDVLDHPWLERS 639
E +PD R A D+L +L+ S
Sbjct: 262 CFEPDPDKRACANDLLVDEFLKVS 285
>pdb|2J51|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To 5-
Amino-3-((4-(Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2,4-Triazole-1-Carbothioamide
Length = 325
Score = 114 bits (286), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 84/264 (31%), Positives = 136/264 (51%), Gaps = 23/264 (8%)
Query: 385 IGDGNFAVVRQVYDKHKDMDCALKIID-KSKLLGKKQMIENEVNILRSVNHPNIIKLLDE 443
+GDG F V + +K + A K+ID KS+ + M+E ++IL S +HPNI+KLLD
Sbjct: 45 LGDGAFGKVYKAQNKETSVLAAAKVIDTKSEEELEDYMVE--IDILASCDHPNIVKLLDA 102
Query: 444 YDTNNELYLVIELIKGGDLFDAISKNVK--FSEEDSKFMTQSLASALSYLHDNYIVHRDI 501
+ N L+++IE GG + DA+ ++ +E + + + AL+YLHDN I+HRD+
Sbjct: 103 FYYENNLWILIEFCAGGAV-DAVMLELERPLTESQIQVVCKQTLDALNYLHDNKIIHRDL 161
Query: 502 KPENLLVEMSGCHVKVLKVGDFGLAQ---RVLRPMFTVCGTPTYVAPEIL-----NESGY 553
K N+L + G +K+ DFG++ R ++ + GTP ++APE++ + Y
Sbjct: 162 KAGNILFTLDGD----IKLADFGVSAKNTRTIQRRDSFIGTPYWMAPEVVMCETSKDRPY 217
Query: 554 GVKIDVWAAGVILYILLCGFPPFVSDTNDQDELFDDILSGQYGFPSP-YWDDISEEAKEL 612
K DVW+ G+ L I + P + N L S P W S K+
Sbjct: 218 DYKADVWSLGITL-IEMAEIEPPHHELNPMRVLLKIAKSEPPTLAQPSRW---SSNFKDF 273
Query: 613 ISHMLESNPDLRFSAEDVLDHPWL 636
+ LE N D R++ +L HP++
Sbjct: 274 LKKCLEKNVDARWTTSQLLQHPFV 297
>pdb|2JFM|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (Unliganded
Form)
Length = 325
Score = 114 bits (285), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 84/264 (31%), Positives = 136/264 (51%), Gaps = 23/264 (8%)
Query: 385 IGDGNFAVVRQVYDKHKDMDCALKIID-KSKLLGKKQMIENEVNILRSVNHPNIIKLLDE 443
+GDG F V + +K + A K+ID KS+ + M+E ++IL S +HPNI+KLLD
Sbjct: 45 LGDGAFGKVYKAQNKETSVLAAAKVIDTKSEEELEDYMVE--IDILASCDHPNIVKLLDA 102
Query: 444 YDTNNELYLVIELIKGGDLFDAISKNVK--FSEEDSKFMTQSLASALSYLHDNYIVHRDI 501
+ N L+++IE GG + DA+ ++ +E + + + AL+YLHDN I+HRD+
Sbjct: 103 FYYENNLWILIEFCAGGAV-DAVMLELERPLTESQIQVVCKQTLDALNYLHDNKIIHRDL 161
Query: 502 KPENLLVEMSGCHVKVLKVGDFGLAQ---RVLRPMFTVCGTPTYVAPEIL-----NESGY 553
K N+L + G +K+ DFG++ R ++ + GTP ++APE++ + Y
Sbjct: 162 KAGNILFTLDGD----IKLADFGVSAKNTRXIQRRDSFIGTPYWMAPEVVMCETSKDRPY 217
Query: 554 GVKIDVWAAGVILYILLCGFPPFVSDTNDQDELFDDILSGQYGFPSP-YWDDISEEAKEL 612
K DVW+ G+ L I + P + N L S P W S K+
Sbjct: 218 DYKADVWSLGITL-IEMAEIEPPHHELNPMRVLLKIAKSEPPTLAQPSRW---SSNFKDF 273
Query: 613 ISHMLESNPDLRFSAEDVLDHPWL 636
+ LE N D R++ +L HP++
Sbjct: 274 LKKCLEKNVDARWTTSQLLQHPFV 297
>pdb|3VW6|A Chain A, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
pdb|3VW6|B Chain B, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
Length = 269
Score = 114 bits (284), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 78/256 (30%), Positives = 126/256 (49%), Gaps = 15/256 (5%)
Query: 384 IIGDGNFAVVRQVYDKHKDMDCALKIIDKSKLLGKKQMIENEVNILRSVNHPNIIKLLDE 443
++G G + +V D + A+K I + Q + E+ + + + H NI++ L
Sbjct: 15 VLGKGTYGIVYAGRDLSNQVRIAIKEIPERDSR-YSQPLHEEIALHKHLKHKNIVQYLGS 73
Query: 444 YDTNNELYLVIELIKGGDLFDAISKN---VKFSEEDSKFMTQSLASALSYLHDNYIVHRD 500
+ N + + +E + GG L + +K +E+ F T+ + L YLHDN IVHRD
Sbjct: 74 FSENGFIKIFMEQVPGGSLSALLRSKWGPLKDNEQTIGFYTKQILEGLKYLHDNQIVHRD 133
Query: 501 IKPENLLVEMSGCHVKVLKVGDFGLAQRV--LRPMF-TVCGTPTYVAPEILNES--GYGV 555
IK +N+L+ + VLK+ DFG ++R+ + P T GT Y+APEI+++ GYG
Sbjct: 134 IKGDNVLIN---TYSGVLKISDFGTSKRLAGINPCTETFTGTLQYMAPEIIDKGPRGYGK 190
Query: 556 KIDVWAAGVILYILLCGFPPFVSDTNDQDELFDDILSGQYGFPSPYWDDISEEAKELISH 615
D+W+ G + + G PPF Q +F G + + +S EAK I
Sbjct: 191 AADIWSLGCTIIEMATGKPPFYELGEPQAAMFK---VGMFKVHPEIPESMSAEAKAFILK 247
Query: 616 MLESNPDLRFSAEDVL 631
E +PD R A D+L
Sbjct: 248 CFEPDPDKRACANDLL 263
>pdb|4FIE|A Chain A, Full-Length Human Pak4
pdb|4FIE|B Chain B, Full-Length Human Pak4
Length = 423
Score = 113 bits (283), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 69/259 (26%), Positives = 143/259 (55%), Gaps = 14/259 (5%)
Query: 385 IGDGNFAVVRQVYDKHKDMDCALKIIDKSKLLGKKQMIENEVNILRSVNHPNIIKLLDEY 444
IG+G+ +V + A+K +D K +++++ NEV I+R H N++++ + Y
Sbjct: 159 IGEGSTGIVCIATVRSSGKLVAVKKMDLRKQ-QRRELLFNEVVIMRDYQHENVVEMYNSY 217
Query: 445 DTNNELYLVIELIKGGDLFDAISKNVKFSEEDSKFMTQSLASALSYLHDNYIVHRDIKPE 504
+EL++V+E ++GG L D ++ + + +EE + ++ ALS LH ++HRDIK +
Sbjct: 218 LVGDELWVVMEFLEGGALTDIVT-HTRMNEEQIAAVCLAVLQALSVLHAQGVIHRDIKSD 276
Query: 505 NLLVEMSGCHVKVLKVGDFGLAQRVLRPMF---TVCGTPTYVAPEILNESGYGVKIDVWA 561
++L+ H +K+ DFG +V + + + GTP ++APE+++ YG ++D+W+
Sbjct: 277 SILL----THDGRVKLSDFGFCAQVSKEVPRRKXLVGTPYWMAPELISRLPYGPEVDIWS 332
Query: 562 AGVILYILLCGFPPFVSDTNDQD-ELFDDILSGQYGFPSPYWDDISEEAKELISHMLESN 620
G+++ ++ G PP+ ++ + ++ D L + +S K + +L +
Sbjct: 333 LGIMVIEMVDGEPPYFNEPPLKAMKMIRDNLPPRLK----NLHKVSPSLKGFLDRLLVRD 388
Query: 621 PDLRFSAEDVLDHPWLERS 639
P R +A ++L HP+L ++
Sbjct: 389 PAQRATAAELLKHPFLAKA 407
>pdb|2JFL|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (
Diphosphorylated Form) Bound To 5- Amino-3-((4-(
Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2, 4-Triazole-1-Carbothioamide
Length = 325
Score = 113 bits (282), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 84/264 (31%), Positives = 135/264 (51%), Gaps = 23/264 (8%)
Query: 385 IGDGNFAVVRQVYDKHKDMDCALKIID-KSKLLGKKQMIENEVNILRSVNHPNIIKLLDE 443
+GDG F V + +K + A K+ID KS+ + M+E ++IL S +HPNI+KLLD
Sbjct: 45 LGDGAFGKVYKAQNKETSVLAAAKVIDTKSEEELEDYMVE--IDILASCDHPNIVKLLDA 102
Query: 444 YDTNNELYLVIELIKGGDLFDAISKNVK--FSEEDSKFMTQSLASALSYLHDNYIVHRDI 501
+ N L+++IE GG + DA+ ++ +E + + + AL+YLHDN I+HRD+
Sbjct: 103 FYYENNLWILIEFCAGGAV-DAVMLELERPLTESQIQVVCKQTLDALNYLHDNKIIHRDL 161
Query: 502 KPENLLVEMSGCHVKVLKVGDFGLAQ---RVLRPMFTVCGTPTYVAPEIL-----NESGY 553
K N+L + G +K+ DFG++ R ++ GTP ++APE++ + Y
Sbjct: 162 KAGNILFTLDGD----IKLADFGVSAKNTRXIQRRDXFIGTPYWMAPEVVMCETSKDRPY 217
Query: 554 GVKIDVWAAGVILYILLCGFPPFVSDTNDQDELFDDILSGQYGFPSP-YWDDISEEAKEL 612
K DVW+ G+ L I + P + N L S P W S K+
Sbjct: 218 DYKADVWSLGITL-IEMAEIEPPHHELNPMRVLLKIAKSEPPTLAQPSRW---SSNFKDF 273
Query: 613 ISHMLESNPDLRFSAEDVLDHPWL 636
+ LE N D R++ +L HP++
Sbjct: 274 LKKCLEKNVDARWTTSQLLQHPFV 297
>pdb|2UV2|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To
4-(4-(
5-Cyclopropyl-1h-Pyrazol-3-Ylamino)-Quinazolin-2-
Ylamino)- Phenyl)-Acetonitrile
Length = 287
Score = 112 bits (281), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 85/268 (31%), Positives = 138/268 (51%), Gaps = 25/268 (9%)
Query: 383 QIIGD-GNFAVVRQVYDKHKDMDCALKIID-KSKLLGKKQMIENEVNILRSVNHPNIIKL 440
+IIG+ G+F V + +K + A K+ID KS+ + M+E ++IL S +HPNI+KL
Sbjct: 15 EIIGELGDFGKVYKAQNKETSVLAAAKVIDTKSEEELEDYMVE--IDILASCDHPNIVKL 72
Query: 441 LDEYDTNNELYLVIELIKGGDLFDAISKNVK--FSEEDSKFMTQSLASALSYLHDNYIVH 498
LD + N L+++IE GG + DA+ ++ +E + + + AL+YLHDN I+H
Sbjct: 73 LDAFYYENNLWILIEFCAGGAV-DAVMLELERPLTESQIQVVCKQTLDALNYLHDNKIIH 131
Query: 499 RDIKPENLLVEMSGCHVKVLKVGDFGLAQRVLRPMF----TVCGTPTYVAPEIL-----N 549
RD+K N+L + G +K+ DFG++ + R + GTP ++APE++
Sbjct: 132 RDLKAGNILFTLDG----DIKLADFGVSAKNTRTXIQRRDSFIGTPYWMAPEVVMCETSK 187
Query: 550 ESGYGVKIDVWAAGVILYILLCGFPPFVSDTNDQDELFDDILSGQYGFPSP-YWDDISEE 608
+ Y K DVW+ G+ L I + P + N L S P W S
Sbjct: 188 DRPYDYKADVWSLGITL-IEMAEIEPPHHELNPMRVLLKIAKSEPPTLAQPSRW---SSN 243
Query: 609 AKELISHMLESNPDLRFSAEDVLDHPWL 636
K+ + LE N D R++ +L HP++
Sbjct: 244 FKDFLKKCLEKNVDARWTTSQLLQHPFV 271
>pdb|2Q0N|A Chain A, Structure Of Human P21 Activating Kinase 4 (Pak4) In
Complex With A Consensus Peptide
Length = 301
Score = 112 bits (281), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 69/259 (26%), Positives = 143/259 (55%), Gaps = 14/259 (5%)
Query: 385 IGDGNFAVVRQVYDKHKDMDCALKIIDKSKLLGKKQMIENEVNILRSVNHPNIIKLLDEY 444
IG+G+ +V + A+K +D K +++++ NEV I+R H N++++ + Y
Sbjct: 37 IGEGSTGIVCIATVRSSGKLVAVKKMDLRKQ-QRRELLFNEVVIMRDYQHENVVEMYNSY 95
Query: 445 DTNNELYLVIELIKGGDLFDAISKNVKFSEEDSKFMTQSLASALSYLHDNYIVHRDIKPE 504
+EL++V+E ++GG L D ++ + + +EE + ++ ALS LH ++HRDIK +
Sbjct: 96 LVGDELWVVMEFLEGGALTDIVT-HTRMNEEQIAAVCLAVLQALSVLHAQGVIHRDIKSD 154
Query: 505 NLLVEMSGCHVKVLKVGDFGLAQRVLRPM---FTVCGTPTYVAPEILNESGYGVKIDVWA 561
++L+ G +K+ DFG +V + + + GTP ++APE+++ YG ++D+W+
Sbjct: 155 SILLTHDGR----VKLSDFGFCAQVSKEVPRRKXLVGTPYWMAPELISRLPYGPEVDIWS 210
Query: 562 AGVILYILLCGFPPFVSDTNDQD-ELFDDILSGQYGFPSPYWDDISEEAKELISHMLESN 620
G+++ ++ G PP+ ++ + ++ D L + +S K + +L +
Sbjct: 211 LGIMVIEMVDGEPPYFNEPPLKAMKMIRDNLPPRLK----NLHKVSPSLKGFLDRLLVRD 266
Query: 621 PDLRFSAEDVLDHPWLERS 639
P R +A ++L HP+L ++
Sbjct: 267 PAQRATAAELLKHPFLAKA 285
>pdb|2CDZ|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Cgp74514a
pdb|2J0I|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 303
Score = 112 bits (281), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 69/259 (26%), Positives = 143/259 (55%), Gaps = 14/259 (5%)
Query: 385 IGDGNFAVVRQVYDKHKDMDCALKIIDKSKLLGKKQMIENEVNILRSVNHPNIIKLLDEY 444
IG+G+ +V + A+K +D K +++++ NEV I+R H N++++ + Y
Sbjct: 39 IGEGSTGIVCIATVRSSGKLVAVKKMDLRKQ-QRRELLFNEVVIMRDYQHENVVEMYNSY 97
Query: 445 DTNNELYLVIELIKGGDLFDAISKNVKFSEEDSKFMTQSLASALSYLHDNYIVHRDIKPE 504
+EL++V+E ++GG L D ++ + + +EE + ++ ALS LH ++HRDIK +
Sbjct: 98 LVGDELWVVMEFLEGGALTDIVT-HTRMNEEQIAAVCLAVLQALSVLHAQGVIHRDIKSD 156
Query: 505 NLLVEMSGCHVKVLKVGDFGLAQRVLRPM---FTVCGTPTYVAPEILNESGYGVKIDVWA 561
++L+ G +K+ DFG +V + + + GTP ++APE+++ YG ++D+W+
Sbjct: 157 SILLTHDGR----VKLSDFGFCAQVSKEVPRRKXLVGTPYWMAPELISRLPYGPEVDIWS 212
Query: 562 AGVILYILLCGFPPFVSDTNDQD-ELFDDILSGQYGFPSPYWDDISEEAKELISHMLESN 620
G+++ ++ G PP+ ++ + ++ D L + +S K + +L +
Sbjct: 213 LGIMVIEMVDGEPPYFNEPPLKAMKMIRDNLPPRLK----NLHKVSPSLKGFLDRLLVRD 268
Query: 621 PDLRFSAEDVLDHPWLERS 639
P R +A ++L HP+L ++
Sbjct: 269 PAQRATAAELLKHPFLAKA 287
>pdb|4AW2|A Chain A, Crystal Structure Of Cdc42 Binding Protein Kinase Alpha
(Mrck Alpha)
Length = 437
Score = 112 bits (281), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 85/273 (31%), Positives = 143/273 (52%), Gaps = 21/273 (7%)
Query: 379 YSVGQIIGDGNFAVVRQVYDKHKDMDCALKIIDKSKLLGKKQM--IENEVNILRSVNHPN 436
+ + ++IG G F V V K+ D A+KI++K ++L + + E ++L + +
Sbjct: 76 FEILKVIGRGAFGEVAVVKLKNADKVFAMKILNKWEMLKRAETACFREERDVLVNGDSKW 135
Query: 437 IIKLLDEYDTNNELYLVIELIKGGDLFDAISK-NVKFSEEDSKFMTQSLASALSYLHDNY 495
I L + +N LYLV++ GGDL +SK + EE ++F + A+ +H +
Sbjct: 136 ITTLHYAFQDDNNLYLVMDYYVGGDLLTLLSKFEDRLPEEMARFYLAEMVIAIDSVHQLH 195
Query: 496 IVHRDIKPENLLVEMSGCHVKVLKVGDFGLAQRVLR----PMFTVCGTPTYVAPEILN-- 549
VHRDIKP+N+L++M+G H+ ++ DFG +++ GTP Y++PEIL
Sbjct: 196 YVHRDIKPDNILMDMNG-HI---RLADFGSCLKLMEDGTVQSSVAVGTPDYISPEILQAM 251
Query: 550 ESG---YGVKIDVWAAGVILYILLCGFPPFVSDTNDQDELFDDILSGQYGFPSPYW-DDI 605
E G YG + D W+ GV +Y +L G PF +++ E + I++ + F P D+
Sbjct: 252 EGGKGRYGPECDWWSLGVCMYEMLYGETPFYAES--LVETYGKIMNHKERFQFPTQVTDV 309
Query: 606 SEEAKELISHMLESNPDL--RFSAEDVLDHPWL 636
SE AK+LI ++ S + ED HP+
Sbjct: 310 SENAKDLIRRLICSREHRLGQNGIEDFKKHPFF 342
>pdb|4FIF|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIF|B Chain B, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIG|A Chain A, Catalytic Domain Of Human Pak4
pdb|4FIG|B Chain B, Catalytic Domain Of Human Pak4
pdb|4FIH|A Chain A, Catalytic Domain Of Human Pak4 With Qkftglprqw Peptide
pdb|4FII|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIJ|A Chain A, Catalytic Domain Of Human Pak4
Length = 346
Score = 112 bits (281), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 69/259 (26%), Positives = 143/259 (55%), Gaps = 14/259 (5%)
Query: 385 IGDGNFAVVRQVYDKHKDMDCALKIIDKSKLLGKKQMIENEVNILRSVNHPNIIKLLDEY 444
IG+G+ +V + A+K +D K +++++ NEV I+R H N++++ + Y
Sbjct: 82 IGEGSTGIVCIATVRSSGKLVAVKKMDLRKQ-QRRELLFNEVVIMRDYQHENVVEMYNSY 140
Query: 445 DTNNELYLVIELIKGGDLFDAISKNVKFSEEDSKFMTQSLASALSYLHDNYIVHRDIKPE 504
+EL++V+E ++GG L D ++ + + +EE + ++ ALS LH ++HRDIK +
Sbjct: 141 LVGDELWVVMEFLEGGALTDIVT-HTRMNEEQIAAVCLAVLQALSVLHAQGVIHRDIKSD 199
Query: 505 NLLVEMSGCHVKVLKVGDFGLAQRVLRPM---FTVCGTPTYVAPEILNESGYGVKIDVWA 561
++L+ H +K+ DFG +V + + + GTP ++APE+++ YG ++D+W+
Sbjct: 200 SILL----THDGRVKLSDFGFCAQVSKEVPRRKXLVGTPYWMAPELISRLPYGPEVDIWS 255
Query: 562 AGVILYILLCGFPPFVSDTNDQD-ELFDDILSGQYGFPSPYWDDISEEAKELISHMLESN 620
G+++ ++ G PP+ ++ + ++ D L + +S K + +L +
Sbjct: 256 LGIMVIEMVDGEPPYFNEPPLKAMKMIRDNLPPRLK----NLHKVSPSLKGFLDRLLVRD 311
Query: 621 PDLRFSAEDVLDHPWLERS 639
P R +A ++L HP+L ++
Sbjct: 312 PAQRATAAELLKHPFLAKA 330
>pdb|2BVA|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
pdb|2BVA|B Chain B, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 292
Score = 112 bits (280), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 69/259 (26%), Positives = 143/259 (55%), Gaps = 14/259 (5%)
Query: 385 IGDGNFAVVRQVYDKHKDMDCALKIIDKSKLLGKKQMIENEVNILRSVNHPNIIKLLDEY 444
IG+G+ +V + A+K +D K +++++ NEV I+R H N++++ + Y
Sbjct: 28 IGEGSTGIVCIATVRSSGKLVAVKKMDLRKQ-QRRELLFNEVVIMRDYQHENVVEMYNSY 86
Query: 445 DTNNELYLVIELIKGGDLFDAISKNVKFSEEDSKFMTQSLASALSYLHDNYIVHRDIKPE 504
+EL++V+E ++GG L D ++ + + +EE + ++ ALS LH ++HRDIK +
Sbjct: 87 LVGDELWVVMEFLEGGALTDIVT-HTRMNEEQIAAVCLAVLQALSVLHAQGVIHRDIKSD 145
Query: 505 NLLVEMSGCHVKVLKVGDFGLAQRVLRPM---FTVCGTPTYVAPEILNESGYGVKIDVWA 561
++L+ G +K+ DFG +V + + + GTP ++APE+++ YG ++D+W+
Sbjct: 146 SILLTHDGR----VKLSDFGFCAQVSKEVPRRKXLVGTPYWMAPELISRLPYGPEVDIWS 201
Query: 562 AGVILYILLCGFPPFVSDTNDQD-ELFDDILSGQYGFPSPYWDDISEEAKELISHMLESN 620
G+++ ++ G PP+ ++ + ++ D L + +S K + +L +
Sbjct: 202 LGIMVIEMVDGEPPYFNEPPLKAMKMIRDNLPPRLK----NLHKVSPSLKGFLDRLLVRD 257
Query: 621 PDLRFSAEDVLDHPWLERS 639
P R +A ++L HP+L ++
Sbjct: 258 PAQRATAAELLKHPFLAKA 276
>pdb|2X4Z|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Pf-03758309
pdb|4APP|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With (S)-N-(5-(3-Benzyl-1-Methylpiperazine-4-
Carbonyl)-6,6-Dimethyl-1,4,5,6-Tetrahydropyrrolo(3,4-C)
Pyrazol-3-Yl)-3-Phenoxybenzamide
Length = 296
Score = 112 bits (280), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 69/259 (26%), Positives = 143/259 (55%), Gaps = 14/259 (5%)
Query: 385 IGDGNFAVVRQVYDKHKDMDCALKIIDKSKLLGKKQMIENEVNILRSVNHPNIIKLLDEY 444
IG+G+ +V + A+K +D K +++++ NEV I+R H N++++ + Y
Sbjct: 32 IGEGSTGIVCIATVRSSGKLVAVKKMDLRKQ-QRRELLFNEVVIMRDYQHENVVEMYNSY 90
Query: 445 DTNNELYLVIELIKGGDLFDAISKNVKFSEEDSKFMTQSLASALSYLHDNYIVHRDIKPE 504
+EL++V+E ++GG L D ++ + + +EE + ++ ALS LH ++HRDIK +
Sbjct: 91 LVGDELWVVMEFLEGGALTDIVT-HTRMNEEQIAAVCLAVLQALSVLHAQGVIHRDIKSD 149
Query: 505 NLLVEMSGCHVKVLKVGDFGLAQRVLRPM---FTVCGTPTYVAPEILNESGYGVKIDVWA 561
++L+ G +K+ DFG +V + + + GTP ++APE+++ YG ++D+W+
Sbjct: 150 SILLTHDGR----VKLSDFGFCAQVSKEVPRRKXLVGTPYWMAPELISRLPYGPEVDIWS 205
Query: 562 AGVILYILLCGFPPFVSDTNDQD-ELFDDILSGQYGFPSPYWDDISEEAKELISHMLESN 620
G+++ ++ G PP+ ++ + ++ D L + +S K + +L +
Sbjct: 206 LGIMVIEMVDGEPPYFNEPPLKAMKMIRDNLPPRLK----NLHKVSPSLKGFLDRLLVRD 261
Query: 621 PDLRFSAEDVLDHPWLERS 639
P R +A ++L HP+L ++
Sbjct: 262 PAQRATAAELLKHPFLAKA 280
>pdb|3TKU|A Chain A, Mrck Beta In Complex With Fasudil
pdb|3TKU|B Chain B, Mrck Beta In Complex With Fasudil
Length = 433
Score = 111 bits (277), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 83/257 (32%), Positives = 141/257 (54%), Gaps = 25/257 (9%)
Query: 379 YSVGQIIGDGNFAVVRQVYDKHKDMDCALKIIDKSKLLGKKQM--IENEVNILRSVNHPN 436
+ + ++IG G F V V K+ + A+KI++K ++L + + E ++L + +
Sbjct: 92 FEIIKVIGRGAFGEVAVVKMKNTERIYAMKILNKWEMLKRAETACFREERDVLVNGDCQW 151
Query: 437 IIKLLDEYDTNNELYLVIELIKGGDLFDAISK-NVKFSEEDSKFMTQSLASALSYLHDNY 495
I L + N LYLV++ GGDL +SK K E+ ++F + A+ +H +
Sbjct: 152 ITALHYAFQDENHLYLVMDYYVGGDLLTLLSKFEDKLPEDMARFYIGEMVLAIDSIHQLH 211
Query: 496 IVHRDIKPENLLVEMSGCHVKV------LKVGDFGLAQRVLRPMFTVCGTPTYVAPEILN 549
VHRDIKP+N+L++++G H+++ LK+ D G Q + GTP Y++PEIL
Sbjct: 212 YVHRDIKPDNVLLDVNG-HIRLADFGSCLKMNDDGTVQSSV-----AVGTPDYISPEILQ 265
Query: 550 --ESG---YGVKIDVWAAGVILYILLCGFPPFVSDTNDQDELFDDILSGQ--YGFPSPYW 602
E G YG + D W+ GV +Y +L G PF +++ E + I++ + + FPS +
Sbjct: 266 AMEDGMGKYGPECDWWSLGVCMYEMLYGETPFYAES--LVETYGKIMNHEERFQFPS-HV 322
Query: 603 DDISEEAKELISHMLES 619
D+SEEAK+LI ++ S
Sbjct: 323 TDVSEEAKDLIQRLICS 339
>pdb|3QFV|A Chain A, Mrck Beta In Complex With Tpca-1
pdb|3QFV|B Chain B, Mrck Beta In Complex With Tpca-1
Length = 415
Score = 110 bits (276), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 83/257 (32%), Positives = 141/257 (54%), Gaps = 25/257 (9%)
Query: 379 YSVGQIIGDGNFAVVRQVYDKHKDMDCALKIIDKSKLLGKKQM--IENEVNILRSVNHPN 436
+ + ++IG G F V V K+ + A+KI++K ++L + + E ++L + +
Sbjct: 76 FEIIKVIGRGAFGEVAVVKMKNTERIYAMKILNKWEMLKRAETACFREERDVLVNGDCQW 135
Query: 437 IIKLLDEYDTNNELYLVIELIKGGDLFDAISK-NVKFSEEDSKFMTQSLASALSYLHDNY 495
I L + N LYLV++ GGDL +SK K E+ ++F + A+ +H +
Sbjct: 136 ITALHYAFQDENHLYLVMDYYVGGDLLTLLSKFEDKLPEDMARFYIGEMVLAIDSIHQLH 195
Query: 496 IVHRDIKPENLLVEMSGCHVKV------LKVGDFGLAQRVLRPMFTVCGTPTYVAPEILN 549
VHRDIKP+N+L++++G H+++ LK+ D G Q + GTP Y++PEIL
Sbjct: 196 YVHRDIKPDNVLLDVNG-HIRLADFGSCLKMNDDGTVQSSV-----AVGTPDYISPEILQ 249
Query: 550 --ESG---YGVKIDVWAAGVILYILLCGFPPFVSDTNDQDELFDDILSGQ--YGFPSPYW 602
E G YG + D W+ GV +Y +L G PF +++ E + I++ + + FPS +
Sbjct: 250 AMEDGMGKYGPECDWWSLGVCMYEMLYGETPFYAES--LVETYGKIMNHEERFQFPS-HV 306
Query: 603 DDISEEAKELISHMLES 619
D+SEEAK+LI ++ S
Sbjct: 307 TDVSEEAKDLIQRLICS 323
>pdb|2XRP|I Chain I, Human Doublecortin N-Dc Repeat (1mjd) And Mammalian
Tubulin (1jff And 3hke) Docked Into The 8-Angstrom
Cryo-Em Map Of Doublecortin-Stabilised Microtubules
Length = 95
Score = 110 bits (275), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 50/91 (54%), Positives = 76/91 (83%), Gaps = 2/91 (2%)
Query: 98 RRAKRIRFLCNGDKFFKGVVMAVGPERYRSFDSLLEELTRALAENINLPSGVRILFTMDG 157
++AK++RF NGD++FKG+V AV +R+RSFD+LL +LTR+L++NINLP GVR ++T+DG
Sbjct: 5 KKAKKVRFYRNGDRYFKGIVYAVSSDRFRSFDALLADLTRSLSDNINLPQGVRYIYTIDG 64
Query: 158 -QKVTNIDELEDGKFYICSSSGDQFKKVDYA 187
+K+ ++DELE+G+ Y+CSS + FKKV+Y
Sbjct: 65 SRKIGSMDELEEGESYVCSSD-NFFKKVEYT 94
>pdb|1MJD|A Chain A, Structure Of N-Terminal Domain Of Human Doublecortin
Length = 113
Score = 110 bits (274), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 50/90 (55%), Positives = 76/90 (84%), Gaps = 2/90 (2%)
Query: 98 RRAKRIRFLCNGDKFFKGVVMAVGPERYRSFDSLLEELTRALAENINLPSGVRILFTMDG 157
++AK++RF NGD++FKG+V AV +R+RSFD+LL +LTR+L++NINLP GVR ++T+DG
Sbjct: 13 KKAKKVRFYRNGDRYFKGIVYAVSSDRFRSFDALLADLTRSLSDNINLPQGVRYIYTIDG 72
Query: 158 -QKVTNIDELEDGKFYICSSSGDQFKKVDY 186
+K+ ++DELE+G+ Y+CSS + FKKV+Y
Sbjct: 73 SRKIGSMDELEEGESYVCSSD-NFFKKVEY 101
>pdb|2PK9|A Chain A, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PK9|C Chain C, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PMI|A Chain A, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
pdb|2PMI|C Chain C, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
Length = 317
Score = 108 bits (271), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 87/296 (29%), Positives = 138/296 (46%), Gaps = 55/296 (18%)
Query: 385 IGDGNFAVVRQVYDKHKDMDCALKIIDKSKLLGKKQMIENEVNILRSVNHPNIIKLLDEY 444
+G+G +A V + +K + ALK + G E+++++ + H NI++L D
Sbjct: 13 LGNGTYATVYKGLNKTTGVYVALKEVKLDSEEGTPSTAIREISLMKELKHENIVRLYDVI 72
Query: 445 DTNNELYLVIELIKGGDLFDAI-SKNVKFSEED-----SKFMTQSLASALSYLHDNYIVH 498
T N+L LV E + DL + S+ V + K+ L L++ H+N I+H
Sbjct: 73 HTENKLTLVFEFMD-NDLKKYMDSRTVGNTPRGLELNLVKYFQWQLLQGLAFCHENKILH 131
Query: 499 RDIKPENLLVEMSGCHVKVLKVGDFGLAQRVLRPMFTVCG---TPTYVAPEILNES-GYG 554
RD+KP+NLL+ G LK+GDFGLA+ P+ T T Y AP++L S Y
Sbjct: 132 RDLKPQNLLINKRG----QLKLGDFGLARAFGIPVNTFSSEVVTLWYRAPDVLMGSRTYS 187
Query: 555 VKIDVWAAGVILYILLCGFPPFVSDTNDQDEL---FDDILSGQYGFPS-PYWDDISEEAK 610
ID+W+ G IL ++ G P F TND+++L FD + G P+ W +++ K
Sbjct: 188 TSIDIWSCGCILAEMITGKPLF-PGTNDEEQLKLIFDIM-----GTPNESLWPSVTKLPK 241
Query: 611 ------------------------------ELISHMLESNPDLRFSAEDVLDHPWL 636
+ + +L+ NPD+R SA+ L HPW
Sbjct: 242 YNPNIQQRPPRDLRQVLQPHTKEPLDGNLMDFLHGLLQLNPDMRLSAKQALHHPWF 297
>pdb|4EOI|A Chain A, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOI|C Chain C, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 299
Score = 108 bits (270), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 89/284 (31%), Positives = 135/284 (47%), Gaps = 37/284 (13%)
Query: 385 IGDGNFAVVRQVYDKHKDMDCALKIID-KSKLLGKKQMIENEVNILRSVNHPNIIKLLDE 443
IG+G + VV + +K ALK I ++ G E+++L+ +NHPNI+KLLD
Sbjct: 11 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDV 70
Query: 444 YDTNNELYLVIELIKG--GDLFDAISKNVKFSEEDSKFMTQSLASALSYLHDNYIVHRDI 501
T N+LYLV E + D DA + ++ Q L L++ H + ++HRD+
Sbjct: 71 IHTENKLYLVFEFLHQDLKDFMDASALTGIPLPLIKSYLFQ-LLQGLAFCHSHRVLHRDL 129
Query: 502 KPENLLVEMSGCHVKVLKVGDFGLAQRVLRPMFTV---CGTPTYVAPEI-LNESGYGVKI 557
KPENLL+ G +K+ DFGLA+ P+ T T Y APEI L Y +
Sbjct: 130 KPENLLINTEGA----IKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKYYSTAV 185
Query: 558 DVWAAGVILYILLCGFPPFVSDTNDQDELF----------DDILSGQYGFPS-----PYW 602
D+W+ G I ++ F D+ + D+LF + + G P P W
Sbjct: 186 DIWSLGCIFAEMVTRRALFPGDS-EIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFPKW 244
Query: 603 --DDIS-------EEAKELISHMLESNPDLRFSAEDVLDHPWLE 637
D S E+ + L+S ML +P+ R SA+ L HP+ +
Sbjct: 245 ARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQ 288
>pdb|4EOK|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOK|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOL|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EOL|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 107 bits (267), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 88/284 (30%), Positives = 135/284 (47%), Gaps = 37/284 (13%)
Query: 385 IGDGNFAVVRQVYDKHKDMDCALKIID-KSKLLGKKQMIENEVNILRSVNHPNIIKLLDE 443
IG+G + VV + +K ALK I ++ G E+++L+ +NHPNI+KLLD
Sbjct: 13 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDV 72
Query: 444 YDTNNELYLVIELIKG--GDLFDAISKNVKFSEEDSKFMTQSLASALSYLHDNYIVHRDI 501
T N+LYLV E + D DA + ++ Q L L++ H + ++HRD+
Sbjct: 73 IHTENKLYLVFEFLSMDLKDFMDASALTGIPLPLIKSYLFQ-LLQGLAFCHSHRVLHRDL 131
Query: 502 KPENLLVEMSGCHVKVLKVGDFGLAQRVLRPMFTV---CGTPTYVAPEI-LNESGYGVKI 557
KP+NLL+ G +K+ DFGLA+ P+ T T Y APEI L Y +
Sbjct: 132 KPQNLLINTEGA----IKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKYYSTAV 187
Query: 558 DVWAAGVILYILLCGFPPFVSDTNDQDELF----------DDILSGQYGFPS-----PYW 602
D+W+ G I ++ F D+ + D+LF + + G P P W
Sbjct: 188 DIWSLGCIFAEMVTRRALFPGDS-EIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFPKW 246
Query: 603 --DDIS-------EEAKELISHMLESNPDLRFSAEDVLDHPWLE 637
D S E+ + L+S ML +P+ R SA+ L HP+ +
Sbjct: 247 ARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQ 290
>pdb|4EOJ|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
pdb|4EOJ|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
Length = 302
Score = 107 bits (267), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 86/284 (30%), Positives = 134/284 (47%), Gaps = 37/284 (13%)
Query: 385 IGDGNFAVVRQVYDKHKDMDCALKIID-KSKLLGKKQMIENEVNILRSVNHPNIIKLLDE 443
IG+G + VV + +K ALK I ++ G E+++L+ +NHPNI+KLLD
Sbjct: 14 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDV 73
Query: 444 YDTNNELYLVIELIKG--GDLFDAISKNVKFSEEDSKFMTQSLASALSYLHDNYIVHRDI 501
T N+LYLV E + D DA + ++ Q L L++ H + ++HRD+
Sbjct: 74 IHTENKLYLVFEFLSMDLKDFMDASALTGIPLPLIKSYLFQ-LLQGLAFCHSHRVLHRDL 132
Query: 502 KPENLLVEMSGCHVKVLKVGDFGLAQRVLRPMFTV---CGTPTYVAPEI-LNESGYGVKI 557
KP+NLL+ G +K+ DFGLA+ P+ T T Y APEI L Y +
Sbjct: 133 KPQNLLINTEGA----IKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKYYSTAV 188
Query: 558 DVWAAGVILYILLCGFPPFVSDTNDQDELF----------DDILSGQYGFPS-----PYW 602
D+W+ G I ++ F D+ + D+LF + + G P P W
Sbjct: 189 DIWSLGCIFAEMVTRRALFPGDS-EIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFPKW 247
Query: 603 ---------DDISEEAKELISHMLESNPDLRFSAEDVLDHPWLE 637
+ E+ + L+S ML +P+ R SA+ L HP+ +
Sbjct: 248 ARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQ 291
>pdb|1UF0|A Chain A, Solution Structure Of The N-Terminal Dcx Domain Of Human
Doublecortin-Like Kinase
Length = 116
Score = 107 bits (266), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 49/106 (46%), Positives = 81/106 (76%), Gaps = 2/106 (1%)
Query: 98 RRAKRIRFLCNGDKFFKGVVMAVGPERYRSFDSLLEELTRALAENINLPSGVRILFTMDG 157
++AK++RF NGD++FKG+V A+ P+R+RSF++LL +LTR L++N+NLP GVR ++T+DG
Sbjct: 8 KKAKKVRFYRNGDRYFKGIVYAISPDRFRSFEALLADLTRTLSDNVNLPQGVRTIYTIDG 67
Query: 158 -QKVTNIDELEDGKFYICSSSGDQFKKVDYAILNNNNSSNTLPRSG 202
+K++++D+L +G+ Y+C S + FKK++Y N N S + SG
Sbjct: 68 LKKISSLDQLVEGESYVCGSI-EPFKKLEYTKNVNPNWSVNVKTSG 112
>pdb|1GZ8|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 2-Amino-6-(3'-Methyl-2'-Oxo)butoxypurine
pdb|2R3Q|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3M|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3I|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3N|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3O|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3P|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3K|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3J|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3L|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|1W8C|A Chain A, Co-crystal Structure Of
6-cyclohexylmethoxy-8-isopropyl-9h- Purin-2-ylamine And
Monomeric Cdk2
Length = 299
Score = 107 bits (266), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 89/284 (31%), Positives = 133/284 (46%), Gaps = 37/284 (13%)
Query: 385 IGDGNFAVVRQVYDKHKDMDCALKIID-KSKLLGKKQMIENEVNILRSVNHPNIIKLLDE 443
IG+G + VV + +K ALK I ++ G E+++L+ +NHPNI+KLLD
Sbjct: 11 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDV 70
Query: 444 YDTNNELYLVIELIKGGDL--FDAISKNVKFSEEDSKFMTQSLASALSYLHDNYIVHRDI 501
T N+LYLV E + DL F S K L L++ H + ++HRD+
Sbjct: 71 IHTENKLYLVFEFLH-QDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDL 129
Query: 502 KPENLLVEMSGCHVKVLKVGDFGLAQRVLRPMFTVCG---TPTYVAPEI-LNESGYGVKI 557
KP+NLL+ G +K+ DFGLA+ P+ T T Y APEI L Y +
Sbjct: 130 KPQNLLINTEGA----IKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGXKYYSTAV 185
Query: 558 DVWAAGVILYILLCGFPPFVSDTNDQDELF----------DDILSGQYGFPS-----PYW 602
D+W+ G I ++ F D+ + D+LF + + G P P W
Sbjct: 186 DIWSLGCIFAEMVTRRALFPGDS-EIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFPKW 244
Query: 603 --DDIS-------EEAKELISHMLESNPDLRFSAEDVLDHPWLE 637
D S E+ + L+S ML +P+ R SA+ L HP+ +
Sbjct: 245 ARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQ 288
>pdb|2XIK|A Chain A, Structure Of Human Ysk1 (Yeast Sps1-Ste20-Related Kinase
1)
Length = 294
Score = 107 bits (266), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 77/265 (29%), Positives = 125/265 (47%), Gaps = 29/265 (10%)
Query: 385 IGDGNFAVVRQVYDKHKDMDCALKIIDKSKLLGKKQMIENEVNILRSVNHPNIIKLLDEY 444
IG G+F V + D H A+KIID + + + I+ E+ +L + P I + Y
Sbjct: 27 IGKGSFGEVYKGIDNHTKEVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYITRYFGSY 86
Query: 445 DTNNELYLVIELIKGGDLFDAISKNVKFSEEDSKFMTQSLASALSYLHDNYIVHRDIKPE 504
+ +L++++E + GG D + K E + + + L YLH +HRDIK
Sbjct: 87 LKSTKLWIIMEYLGGGSALDLL-KPGPLEETYIATILREILKGLDYLHSERKIHRDIKAA 145
Query: 505 NLLVEMSGCHVKVLKVGDFGLA-----QRVLRPMFTVCGTPTYVAPEILNESGYGVKIDV 559
N+L+ G +K+ DFG+A ++ R F GTP ++APE++ +S Y K D+
Sbjct: 146 NVLLSEQGD----VKLADFGVAGQLTDTQIKRNXF--VGTPFWMAPEVIKQSAYDFKADI 199
Query: 560 WAAGVILYILLCGFPPFVSDTNDQDELF------DDILSGQYGFPSPYWDDISEEAKELI 613
W+ G+ L G PP SD + LF L GQ+ P KE +
Sbjct: 200 WSLGITAIELAKGEPP-NSDLHPMRVLFLIPKNSPPTLEGQHSKP----------FKEFV 248
Query: 614 SHMLESNPDLRFSAEDVLDHPWLER 638
L +P R +A+++L H ++ R
Sbjct: 249 EACLNKDPRFRPTAKELLKHKFITR 273
>pdb|3COM|A Chain A, Crystal Structure Of Mst1 Kinase
pdb|3COM|B Chain B, Crystal Structure Of Mst1 Kinase
Length = 314
Score = 107 bits (266), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 74/263 (28%), Positives = 129/263 (49%), Gaps = 16/263 (6%)
Query: 379 YSVGQIIGDGNFAVVRQVYDKHKDMDCALKIIDKSKLLGKKQMIENEVNILRSVNHPNII 438
+ V + +G+G++ V + K A+K + L Q I E++I++ + P+++
Sbjct: 31 FDVLEKLGEGSYGSVYKAIHKETGQIVAIKQVPVESDL---QEIIKEISIMQQCDSPHVV 87
Query: 439 KLLDEYDTNNELYLVIELIKGGDLFDAIS-KNVKFSEEDSKFMTQSLASALSYLHDNYIV 497
K Y N +L++V+E G + D I +N +E++ + QS L YLH +
Sbjct: 88 KYYGSYFKNTDLWIVMEYCGAGSVSDIIRLRNKTLTEDEIATILQSTLKGLEYLHFMRKI 147
Query: 498 HRDIKPENLLVEMSGCHVKVLKVGDFGLAQRVLRPMF---TVCGTPTYVAPEILNESGYG 554
HRDIK N+L+ G H K+ DFG+A ++ M V GTP ++APE++ E GY
Sbjct: 148 HRDIKAGNILLNTEG-HAKL---ADFGVAGQLTDXMAKRNXVIGTPFWMAPEVIQEIGYN 203
Query: 555 VKIDVWAAGVILYILLCGFPPFVSDTNDQDELFDDILSGQYGFPSP-YWDDISEEAKELI 613
D+W+ G+ + G PP+ +D + +F + F P W D + +
Sbjct: 204 CVADIWSLGITAIEMAEGKPPY-ADIHPMRAIFMIPTNPPPTFRKPELWSD---NFTDFV 259
Query: 614 SHMLESNPDLRFSAEDVLDHPWL 636
L +P+ R +A +L HP++
Sbjct: 260 KQCLVKSPEQRATATQLLQHPFV 282
>pdb|1OIT|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-dependent Kinase Inhibitors Identified Through
Structure-based Hybridisation
Length = 299
Score = 106 bits (265), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 90/284 (31%), Positives = 133/284 (46%), Gaps = 37/284 (13%)
Query: 385 IGDGNFAVVRQVYDKHKDMDCALKIID-KSKLLGKKQMIENEVNILRSVNHPNIIKLLDE 443
IG+G + VV + +K ALK I ++ G E+++L+ +NHPNI+KLLD
Sbjct: 11 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDV 70
Query: 444 YDTNNELYLVIELIKGGDL--FDAISKNVKFSEEDSKFMTQSLASALSYLHDNYIVHRDI 501
T N+LYLV E + DL F S K L LS+ H + ++HRD+
Sbjct: 71 IHTENKLYLVFEFLH-QDLKKFMDASALTGIPLPLIKSYLFQLLQGLSFCHSHRVLHRDL 129
Query: 502 KPENLLVEMSGCHVKVLKVGDFGLAQRVLRPMFTVCG---TPTYVAPEI-LNESGYGVKI 557
KP+NLL+ G +K+ DFGLA+ P+ T T Y APEI L Y +
Sbjct: 130 KPQNLLINTEGA----IKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGCKYYSTAV 185
Query: 558 DVWAAGVILYILLCGFPPFVSDTNDQDELF----------DDILSGQYGFPS-----PYW 602
D+W+ G I ++ F D+ + D+LF + + G P P W
Sbjct: 186 DIWSLGCIFAEMVTRRALFPGDS-EIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFPKW 244
Query: 603 --DDIS-------EEAKELISHMLESNPDLRFSAEDVLDHPWLE 637
D S E+ + L+S ML +P+ R SA+ L HP+ +
Sbjct: 245 ARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQ 288
>pdb|4EOP|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOP|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 300
Score = 106 bits (265), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 88/284 (30%), Positives = 132/284 (46%), Gaps = 37/284 (13%)
Query: 385 IGDGNFAVVRQVYDKHKDMDCALKIID-KSKLLGKKQMIENEVNILRSVNHPNIIKLLDE 443
IG+G + VV + +K ALK I ++ G E+++L+ +NHPNI+KLLD
Sbjct: 13 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDV 72
Query: 444 YDTNNELYLVIELIKGGDL--FDAISKNVKFSEEDSKFMTQSLASALSYLHDNYIVHRDI 501
T N+LYLV E + DL F S K L L++ H + ++HRD+
Sbjct: 73 IHTENKLYLVFEFLH-QDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDL 131
Query: 502 KPENLLVEMSGCHVKVLKVGDFGLAQRVLRPMFTV---CGTPTYVAPEI-LNESGYGVKI 557
KPENLL+ G +K+ DFGLA+ P+ T T Y APEI L Y +
Sbjct: 132 KPENLLINTEGA----IKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKYYSTAV 187
Query: 558 DVWAAGVILYILLCGFPPFVSDTNDQDELF----------DDILSGQYGFPS-----PYW 602
D+W+ G I ++ F D+ + D+LF + + G P P W
Sbjct: 188 DIWSLGCIFAEMVTRRALFPGDS-EIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFPKW 246
Query: 603 ---------DDISEEAKELISHMLESNPDLRFSAEDVLDHPWLE 637
+ E+ + L+S ML +P+ R SA+ L HP+ +
Sbjct: 247 ARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQ 290
>pdb|4ERW|A Chain A, Cdk2 In Complex With Staurosporine
Length = 306
Score = 106 bits (265), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 89/295 (30%), Positives = 138/295 (46%), Gaps = 37/295 (12%)
Query: 374 KLLQRYSVGQIIGDGNFAVVRQVYDKHKDMDCALKIID-KSKLLGKKQMIENEVNILRSV 432
+ ++ + + IG+G + VV + +K ALK I ++ G E+++L+ +
Sbjct: 7 EFMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKEL 66
Query: 433 NHPNIIKLLDEYDTNNELYLVIELIKGGDL--FDAISKNVKFSEEDSKFMTQSLASALSY 490
NHPNI+KLLD T N+LYLV E + DL F S K L L++
Sbjct: 67 NHPNIVKLLDVIHTENKLYLVFEFLH-QDLKKFMDASALTGIPLPLIKSYLFQLLQGLAF 125
Query: 491 LHDNYIVHRDIKPENLLVEMSGCHVKVLKVGDFGLAQRVLRPMFTVCG---TPTYVAPEI 547
H + ++HRD+KP+NLL+ G +K+ DFGLA+ P+ T T Y APEI
Sbjct: 126 CHSHRVLHRDLKPQNLLINTEGA----IKLADFGLARAFGVPVRTYTHEVVTLWYRAPEI 181
Query: 548 -LNESGYGVKIDVWAAGVILYILLCGFPPFVSDTNDQDELF----------DDILSGQYG 596
L Y +D+W+ G I ++ F D+ + D+LF + + G
Sbjct: 182 LLGXKYYSTAVDIWSLGCIFAEMVTRRALFPGDS-EIDQLFRIFRTLGTPDEVVWPGVTS 240
Query: 597 FPS-----PYW--DDIS-------EEAKELISHMLESNPDLRFSAEDVLDHPWLE 637
P P W D S E+ + L+S ML +P+ R SA+ L HP+ +
Sbjct: 241 MPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQ 295
>pdb|4EOO|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
pdb|4EOO|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
Length = 299
Score = 106 bits (265), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 90/284 (31%), Positives = 133/284 (46%), Gaps = 37/284 (13%)
Query: 385 IGDGNFAVVRQVYDKHKDMDCALKIID-KSKLLGKKQMIENEVNILRSVNHPNIIKLLDE 443
IG+G + VV + +K ALK I ++ G E+++L+ +NHPNI+KLLD
Sbjct: 12 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDV 71
Query: 444 YDTNNELYLVIELIKGGDL--FDAISKNVKFSEEDSKFMTQSLASALSYLHDNYIVHRDI 501
T N+LYLV E + DL F S K L L++ H + ++HRD+
Sbjct: 72 IHTENKLYLVFEFLH-QDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDL 130
Query: 502 KPENLLVEMSGCHVKVLKVGDFGLAQRVLRPMFTV---CGTPTYVAPEI-LNESGYGVKI 557
KPENLL+ G +K+ DFGLA+ P+ T T Y APEI L Y +
Sbjct: 131 KPENLLINTEGA----IKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKYYSTAV 186
Query: 558 DVWAAGVILYILLCGFPPFVSDTNDQDELF----------DDILSGQYGFPS-----PYW 602
D+W+ G I ++ F D+ + D+LF + + G P P W
Sbjct: 187 DIWSLGCIFAEMVTRRALFPGDS-EIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFPKW 245
Query: 603 --DDIS-------EEAKELISHMLESNPDLRFSAEDVLDHPWLE 637
D S E+ + L+S ML +P+ R SA+ L HP+ +
Sbjct: 246 ARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQ 289
>pdb|4EOM|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
pdb|4EOM|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
Length = 301
Score = 106 bits (265), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 88/284 (30%), Positives = 132/284 (46%), Gaps = 37/284 (13%)
Query: 385 IGDGNFAVVRQVYDKHKDMDCALKIID-KSKLLGKKQMIENEVNILRSVNHPNIIKLLDE 443
IG+G + VV + +K ALK I ++ G E+++L+ +NHPNI+KLLD
Sbjct: 14 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDV 73
Query: 444 YDTNNELYLVIELIKGGDL--FDAISKNVKFSEEDSKFMTQSLASALSYLHDNYIVHRDI 501
T N+LYLV E + DL F S K L L++ H + ++HRD+
Sbjct: 74 IHTENKLYLVFEFL-SMDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDL 132
Query: 502 KPENLLVEMSGCHVKVLKVGDFGLAQRVLRPMFTV---CGTPTYVAPEI-LNESGYGVKI 557
KPENLL+ G +K+ DFGLA+ P+ T T Y APEI L Y +
Sbjct: 133 KPENLLINTEGA----IKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKYYSTAV 188
Query: 558 DVWAAGVILYILLCGFPPFVSDTNDQDELF----------DDILSGQYGFPS-----PYW 602
D+W+ G I ++ F D+ + D+LF + + G P P W
Sbjct: 189 DIWSLGCIFAEMVTRRALFPGDS-EIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFPKW 247
Query: 603 ---------DDISEEAKELISHMLESNPDLRFSAEDVLDHPWLE 637
+ E+ + L+S ML +P+ R SA+ L HP+ +
Sbjct: 248 ARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQ 291
>pdb|4EON|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EON|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 106 bits (265), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 90/284 (31%), Positives = 133/284 (46%), Gaps = 37/284 (13%)
Query: 385 IGDGNFAVVRQVYDKHKDMDCALKIID-KSKLLGKKQMIENEVNILRSVNHPNIIKLLDE 443
IG+G + VV + +K ALK I ++ G E+++L+ +NHPNI+KLLD
Sbjct: 12 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDV 71
Query: 444 YDTNNELYLVIELIKGGDL--FDAISKNVKFSEEDSKFMTQSLASALSYLHDNYIVHRDI 501
T N+LYLV E + DL F S K L L++ H + ++HRD+
Sbjct: 72 IHTENKLYLVFEFL-SMDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDL 130
Query: 502 KPENLLVEMSGCHVKVLKVGDFGLAQRVLRPMFTV---CGTPTYVAPEI-LNESGYGVKI 557
KPENLL+ G +K+ DFGLA+ P+ T T Y APEI L Y +
Sbjct: 131 KPENLLINTEGA----IKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKYYSTAV 186
Query: 558 DVWAAGVILYILLCGFPPFVSDTNDQDELF----------DDILSGQYGFPS-----PYW 602
D+W+ G I ++ F D+ + D+LF + + G P P W
Sbjct: 187 DIWSLGCIFAEMVTRRALFPGDS-EIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFPKW 245
Query: 603 --DDIS-------EEAKELISHMLESNPDLRFSAEDVLDHPWLE 637
D S E+ + L+S ML +P+ R SA+ L HP+ +
Sbjct: 246 ARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQ 289
>pdb|3KVW|A Chain A, Crystal Structure Of Dual-Specificity Tyrosine
Phosphorylation Regulated Kinase 2 (Dyrk2) In Complex
With An Indirubin Ligand
Length = 429
Score = 106 bits (264), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 78/246 (31%), Positives = 122/246 (49%), Gaps = 18/246 (7%)
Query: 378 RYSVGQIIGDGNFAVVRQVYDKHKDMDCALKIIDKSKLLGKKQMIENEVNILRSV----- 432
RY V ++IG G+F V + YD ALK++ K ++ E+ IL +
Sbjct: 98 RYEVLKVIGKGSFGQVVKAYDHKVHQHVALKMVRNEKRFHRQ--AAEEIRILEHLRKQDK 155
Query: 433 -NHPNIIKLLDEYDTNNELYLVIELIKGGDLFDAISKN--VKFSEEDSKFMTQSLASALS 489
N N+I +L+ + N + + EL+ +L++ I KN FS + S+ L
Sbjct: 156 DNTMNVIHMLENFTFRNHICMTFELLSM-NLYELIKKNKFQGFSLPLVRKFAHSILQCLD 214
Query: 490 YLHDNYIVHRDIKPENLLVEMSGCHVKVLKVGDFGLAQRVLRPMFTVCGTPTYVAPEILN 549
LH N I+H D+KPEN+L++ G +KV DFG + + ++T + Y APE++
Sbjct: 215 ALHKNRIIHCDLKPENILLKQQG--RSGIKVIDFGSSCYEHQRVYTXIQSRFYRAPEVIL 272
Query: 550 ESGYGVKIDVWAAGVILYILLCGFPPFVS-DTNDQDELFDDILSGQYGFPSPYWDDISEE 608
+ YG+ ID+W+ G IL LL G+P D DQ ++L G PS D S+
Sbjct: 273 GARYGMPIDMWSLGCILAELLTGYPLLPGEDEGDQLACMIELL----GMPSQKLLDASKR 328
Query: 609 AKELIS 614
AK +S
Sbjct: 329 AKNFVS 334
>pdb|4AZF|A Chain A, Human Dyrk2 In Complex With Leucettine L41
Length = 417
Score = 105 bits (263), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 78/246 (31%), Positives = 122/246 (49%), Gaps = 18/246 (7%)
Query: 378 RYSVGQIIGDGNFAVVRQVYDKHKDMDCALKIIDKSKLLGKKQMIENEVNILRSV----- 432
RY V ++IG G+F V + YD ALK++ K ++ E+ IL +
Sbjct: 98 RYEVLKVIGKGSFGQVVKAYDHKVHQHVALKMVRNEKRFHRQ--AAEEIRILEHLRKQDK 155
Query: 433 -NHPNIIKLLDEYDTNNELYLVIELIKGGDLFDAISKN--VKFSEEDSKFMTQSLASALS 489
N N+I +L+ + N + + EL+ +L++ I KN FS + S+ L
Sbjct: 156 DNTMNVIHMLENFTFRNHICMTFELLSM-NLYELIKKNKFQGFSLPLVRKFAHSILQCLD 214
Query: 490 YLHDNYIVHRDIKPENLLVEMSGCHVKVLKVGDFGLAQRVLRPMFTVCGTPTYVAPEILN 549
LH N I+H D+KPEN+L++ G +KV DFG + + ++T + Y APE++
Sbjct: 215 ALHKNRIIHCDLKPENILLKQQG--RSGIKVIDFGSSCYEHQRVYTXIQSRFYRAPEVIL 272
Query: 550 ESGYGVKIDVWAAGVILYILLCGFPPFVS-DTNDQDELFDDILSGQYGFPSPYWDDISEE 608
+ YG+ ID+W+ G IL LL G+P D DQ ++L G PS D S+
Sbjct: 273 GARYGMPIDMWSLGCILAELLTGYPLLPGEDEGDQLACMIELL----GMPSQKLLDASKR 328
Query: 609 AKELIS 614
AK +S
Sbjct: 329 AKNFVS 334
>pdb|2BQQ|A Chain A, X-Ray Strucure Of The N-Terminal Domain Of Human
Doublecortin
Length = 113
Score = 105 bits (263), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 48/90 (53%), Positives = 74/90 (82%), Gaps = 2/90 (2%)
Query: 98 RRAKRIRFLCNGDKFFKGVVMAVGPERYRSFDSLLEELTRALAENINLPSGVRILFTMDG 157
++AK++RF NGD++FKG+V AV +R+RSFD+LL +LTR+L++NINLP GVR ++T+DG
Sbjct: 13 KKAKKVRFYRNGDRYFKGIVYAVSSDRFRSFDALLADLTRSLSDNINLPQGVRYIYTIDG 72
Query: 158 -QKVTNIDELEDGKFYICSSSGDQFKKVDY 186
+K+ ++DELE+G+ Y+CSS + F V+Y
Sbjct: 73 SRKIGSMDELEEGESYVCSSD-NFFDDVEY 101
>pdb|1PF8|A Chain A, Crystal Structure Of Human Cyclin-dependent Kinase 2
Complexed With A Nucleoside Inhibitor
Length = 298
Score = 105 bits (263), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 89/284 (31%), Positives = 133/284 (46%), Gaps = 37/284 (13%)
Query: 385 IGDGNFAVVRQVYDKHKDMDCALKIID-KSKLLGKKQMIENEVNILRSVNHPNIIKLLDE 443
IG+G + VV + +K ALK I ++ G E+++L+ +NHPNI+KLLD
Sbjct: 10 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDV 69
Query: 444 YDTNNELYLVIELIKGGDL--FDAISKNVKFSEEDSKFMTQSLASALSYLHDNYIVHRDI 501
T N+LYLV E + DL F S K L L++ H + ++HRD+
Sbjct: 70 IHTENKLYLVFEFLH-QDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDL 128
Query: 502 KPENLLVEMSGCHVKVLKVGDFGLAQRVLRPMFTVCG---TPTYVAPEI-LNESGYGVKI 557
KP+NLL+ G +K+ DFGLA+ P+ T T Y APEI L Y +
Sbjct: 129 KPQNLLINTEGA----IKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGCKYYSTAV 184
Query: 558 DVWAAGVILYILLCGFPPFVSDTNDQDELF----------DDILSGQYGFPS-----PYW 602
D+W+ G I ++ F D+ + D+LF + + G P P W
Sbjct: 185 DIWSLGCIFAEMVTRRALFPGDS-EIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFPKW 243
Query: 603 --DDIS-------EEAKELISHMLESNPDLRFSAEDVLDHPWLE 637
D S E+ + L+S ML +P+ R SA+ L HP+ +
Sbjct: 244 ARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQ 287
>pdb|3PJ8|A Chain A, Structure Of Cdk2 In Complex With A
Pyrazolo[4,3-D]pyrimidine Bioisostere Of Roscovitine
Length = 299
Score = 105 bits (263), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 89/284 (31%), Positives = 133/284 (46%), Gaps = 37/284 (13%)
Query: 385 IGDGNFAVVRQVYDKHKDMDCALKIID-KSKLLGKKQMIENEVNILRSVNHPNIIKLLDE 443
IG+G + VV + +K ALK I ++ G E+++L+ +NHPNI+KLLD
Sbjct: 11 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDV 70
Query: 444 YDTNNELYLVIELIKGGDL--FDAISKNVKFSEEDSKFMTQSLASALSYLHDNYIVHRDI 501
T N+LYLV E + DL F S K L L++ H + ++HRD+
Sbjct: 71 IHTENKLYLVFEFLH-QDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDL 129
Query: 502 KPENLLVEMSGCHVKVLKVGDFGLAQRVLRPMFTVCG---TPTYVAPEI-LNESGYGVKI 557
KP+NLL+ G +K+ DFGLA+ P+ T T Y APEI L Y +
Sbjct: 130 KPQNLLINTEGA----IKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGCKYYSTAV 185
Query: 558 DVWAAGVILYILLCGFPPFVSDTNDQDELF----------DDILSGQYGFPS-----PYW 602
D+W+ G I ++ F D+ + D+LF + + G P P W
Sbjct: 186 DIWSLGCIFAEMVTRRALFPGDS-EIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFPKW 244
Query: 603 --DDIS-------EEAKELISHMLESNPDLRFSAEDVLDHPWLE 637
D S E+ + L+S ML +P+ R SA+ L HP+ +
Sbjct: 245 ARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQ 288
>pdb|2W17|A Chain A, Cdk2 In Complex With The Imidazole Pyrimidine Amide,
Compound (S)-8b
pdb|3IG7|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efp With Cdk-2
pdb|3IGG|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efq With Cdk-2
pdb|1B38|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1B39|A Chain A, Human Cyclin-Dependent Kinase 2 Phosphorylated On Thr 160
pdb|1E1V|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu2058
pdb|1E1X|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu6027
pdb|1H00|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H07|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H08|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|2R3R|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|4ACM|A Chain A, Cdk2 In Complex With
3-Amino-6-(4-{[2-(Dimethylamino)ethyl]
Sulfamoyl}-Phenyl)-N-Pyridin-3-Ylpyrazine-2-Carboxamide
pdb|3SW4|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|3SW7|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|1OIQ|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
pdb|1V1K|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1URW|A Chain A, Cdk2 In Complex With An Imidazo[1,2-B]pyridazine
pdb|2VV9|A Chain A, Cdk2 In Complex With An Imidazole Piperazine
pdb|2W06|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5c
pdb|2R3G|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3H|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3F|A Chain A, Crystal Structure Of Cyclin-dependent Kinase 2 With
Inhibitor
Length = 299
Score = 105 bits (263), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 89/284 (31%), Positives = 133/284 (46%), Gaps = 37/284 (13%)
Query: 385 IGDGNFAVVRQVYDKHKDMDCALKIID-KSKLLGKKQMIENEVNILRSVNHPNIIKLLDE 443
IG+G + VV + +K ALK I ++ G E+++L+ +NHPNI+KLLD
Sbjct: 11 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDV 70
Query: 444 YDTNNELYLVIELIKGGDL--FDAISKNVKFSEEDSKFMTQSLASALSYLHDNYIVHRDI 501
T N+LYLV E + DL F S K L L++ H + ++HRD+
Sbjct: 71 IHTENKLYLVFEFLH-QDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDL 129
Query: 502 KPENLLVEMSGCHVKVLKVGDFGLAQRVLRPMFTVCG---TPTYVAPEI-LNESGYGVKI 557
KP+NLL+ G +K+ DFGLA+ P+ T T Y APEI L Y +
Sbjct: 130 KPQNLLINTEGA----IKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGCKYYSTAV 185
Query: 558 DVWAAGVILYILLCGFPPFVSDTNDQDELF----------DDILSGQYGFPS-----PYW 602
D+W+ G I ++ F D+ + D+LF + + G P P W
Sbjct: 186 DIWSLGCIFAEMVTRRALFPGDS-EIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFPKW 244
Query: 603 --DDIS-------EEAKELISHMLESNPDLRFSAEDVLDHPWLE 637
D S E+ + L+S ML +P+ R SA+ L HP+ +
Sbjct: 245 ARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQ 288
>pdb|1FIN|A Chain A, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1FIN|C Chain C, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1CKP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Purvalanol B
pdb|1BUH|A Chain A, Crystal Structure Of The Human Cdk2 Kinase Complex With
Cell Cycle-Regulatory Protein Ckshs1
pdb|1DM2|A Chain A, Human Cyclin-Dependent Kinase 2 Complexed With The
Inhibitor Hymenialdisine
pdb|1DI8|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With
4-[3-Hydroxyanilino]-6,7-Dimethoxyquinazoline
pdb|1F5Q|A Chain A, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1F5Q|C Chain C, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1FVT|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With An Oxindole Inhibitor
pdb|1FVV|A Chain A, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1FVV|C Chain C, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1JSV|A Chain A, The Structure Of Cyclin-dependent Kinase 2 (cdk2) In
Complex With 4-[(6-amino-4-pyrimidinyl)
Amino]benzenesulfonamide
pdb|1G5S|A Chain A, Crystal Structure Of Human Cyclin Dependent Kinase 2
(Cdk2) In Complex With The Inhibitor H717
pdb|1JVP|P Chain P, Crystal Structure Of Human Cdk2 (Unphosphorylated) In
Complex With Pkf049-365
pdb|1GIH|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1KE5|A Chain A, Cdk2 Complexed With N-methyl-4-{[(2-oxo-1,2-dihydro-3h-
Indol-3-ylidene)methyl]amino}benzenesulfonamide
pdb|1KE6|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
N-Methyl-{4-
[2-(7-Oxo-6,7-Dihydro-8h-[1,3]thiazolo[5,4-E]indol-8-
Ylidene)hydrazino]phenyl}methanesulfonamide
pdb|1KE7|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[(2,2-
Dioxido-1,
3-Dihydro-2-Benzothien-5-Yl)amino]methylene}-5-
(1,3-Oxazol-5-Yl)-1,3-Dihydro-2h-Indol-2-One
pdb|1KE8|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
4-{[(2-Oxo-
1,2-Dihydro-3h-Indol-3-Ylidene)methyl]amino}-N-(1,3-
Thiazol-2-Yl)benzenesulfonamide
pdb|1KE9|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[4-
({[amino(Imino)methyl]aminosulfonyl)anilino]methylene}-
2- Oxo-2,3-Dihydro-1h-Indole
pdb|1H0V|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor
2-Amino-6-[(R)-Pyrrolidino-5'-Yl]methoxypurine
pdb|1H0W|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 2-Amino-6-[cyclohex-3-Enyl]methoxypurine
pdb|1P2A|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Trisubstituted Naphthostyril Inhibitor
pdb|1OKV|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKV|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKW|A Chain A, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OKW|C Chain C, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OL1|A Chain A, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL1|C Chain C, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL2|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1OL2|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1PW2|A Chain A, Apo Structure Of Human Cyclin-Dependent Kinase 2
pdb|1PXI|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-(2,5-dichloro-thiophen-3-yl)-pyrimidin-2-
Ylamine
pdb|1PXJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Ylamine
pdb|1PXK|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-dimethyl-thiazol-5-yl)pyrimidin-2-yl]-
N'-hydroxyiminoformamide
pdb|1PXL|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2,4-dimethyl-thiazol-5-yl)-pyrimidin-2-yl]-
(4-trifluoromethyl-phenyl)-amine
pdb|1R78|A Chain A, Cdk2 Complex With A 4-alkynyl Oxindole Inhibitor
pdb|1PXM|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 3-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-
Ylamino]-Phenol
pdb|1PXN|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-[4-(4-Methyl-2-Methylamino-Thiazol-5-Yl)-
Pyrimidin-2-Ylamino]-Phenol
pdb|1PXO|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2-Amino-4-Methyl-Thiazol-5-Yl)-Pyrimidin-2-
Yl]-(3-Nitro-Phenyl)-Amine
pdb|1PXP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Yl]-
N',N'-Dimethyl-Benzene-1,4-Diamine
pdb|1VYZ|A Chain A, Structure Of Cdk2 Complexed With Pnu-181227
pdb|1PYE|A Chain A, Crystal Structure Of Cdk2 With Inhibitor
pdb|1URC|A Chain A, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1URC|C Chain C, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1W0X|C Chain C, Crystals Structure Of Human Cdk2 In Complex With The
Inhibitor Olomoucine.
pdb|1WCC|A Chain A, Screening For Fragment Binding By X-Ray Crystallography
pdb|1Y8Y|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|1Y91|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|2BHE|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 5-Bromo-Indirubine
pdb|2BHH|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 4-Hydroxypiperindinesulfonyl-Indirubine
pdb|2B52|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Dph-
042562
pdb|2B53|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Din-
234325
pdb|2B54|A Chain A, Human Cyclin Dependent Kinase 2 (Ckd2)complexed With Din-
232305
pdb|2B55|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With
Indenopyraxole Din-101312
pdb|2BTR|A Chain A, Structure Of Cdk2 Complexed With Pnu-198873
pdb|2BTS|A Chain A, Structure Of Cdk2 Complexed With Pnu-230032
pdb|2C68|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C69|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6I|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6K|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6L|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6M|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6O|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2EXM|A Chain A, Human Cdk2 In Complex With Isopentenyladenine
pdb|1YKR|A Chain A, Crystal Structure Of Cdk2 With An Aminoimidazo Pyridine
Inhibitor
pdb|2A0C|X Chain X, Human Cdk2 In Complex With Olomoucine Ii, A Novel 2,6,9-
Trisubstituted Purine Cyclin-Dependent Kinase Inhibitor
pdb|2C5N|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5N|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5Y|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2A4L|A Chain A, Human Cyclin-Dependent Kinase 2 In Complex With
Roscovitine
pdb|2FVD|A Chain A, Cyclin Dependent Kinase 2 (Cdk2) With Diaminopyrimidine
Inhibitor
pdb|2I40|A Chain A, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2I40|C Chain C, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2CLX|A Chain A, 4-Arylazo-3,5-Diamino-1h-Pyrazole Cdk Inhibitors: Sar
Study, Crystal Structure In Complex With Cdk2,
Selectivity, And Cellular Effects
pdb|2DUV|A Chain A, Structure Of Cdk2 With A 3-Hydroxychromones
pdb|2UUE|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UUE|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UZN|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZO|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2V0D|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|1AQ1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Staurosporine
pdb|1HCK|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1HCL|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|2J9M|A Chain A, Crystal Structure Of Cdk2 In Complex With Macrocyclic
Aminopyrimidine
pdb|2V22|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2V22|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2VTA|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTH|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design
pdb|2VTI|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTJ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTL|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTM|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTN|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTO|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTP|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTQ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTR|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTS|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTT|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VU3|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2R64|A Chain A, Crystal Structure Of A 3-Aminoindazole Compound With Cdk2
pdb|2W05|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5b
pdb|3EID|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EID|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EOC|A Chain A, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|3EOC|C Chain C, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|2W1H|A Chain A, Fragment-Based Discovery Of The Pyrazol-4-Yl Urea
(At9283), A Multi-Targeted Kinase Inhibitor With Potent
Aurora Kinase Activity
pdb|3F5X|A Chain A, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3F5X|C Chain C, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3FZ1|A Chain A, Crystal Structure Of A Benzthiophene Inhibitor Bound To
Human Cyclin-Dependent Kinase-2 (Cdk-2)
pdb|2WEV|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WEV|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|3LFN|A Chain A, Crystal Structure Of Cdk2 With Sar57, An Aminoindazole
Type Inhibitor
pdb|3LFQ|A Chain A, Crystal Structure Of Cdk2 With Sar60, An Aminoindazole
Type Inhibitor
pdb|3LFS|A Chain A, Crystal Structure Of Cdk2 With Sar37, An Aminoindazole
Type Inhibitor
pdb|2XMY|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|2XNB|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|3LE6|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Pyrazolobenzodiazepine Inhibitor
pdb|3NS9|A Chain A, Crystal Structure Of Cdk2 In Complex With Inhibitor Bs-194
pdb|3S2P|A Chain A, Crystal Structure Of Cdk2 With A 2-Aminopyrimidine
Compound
pdb|3UNJ|A Chain A, Cdk2 In Complex With Inhibitor Yl1-038-31
pdb|3UNK|A Chain A, Cdk2 In Complex With Inhibitor Yl5-083
pdb|3TI1|A Chain A, Cdk2 In Complex With Sunitinib
pdb|3TIY|A Chain A, Cdk2 In Complex With Nsc 35676
pdb|3TIZ|A Chain A, Cdk2 In Complex With Nsc 111848
Length = 298
Score = 105 bits (263), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 89/284 (31%), Positives = 133/284 (46%), Gaps = 37/284 (13%)
Query: 385 IGDGNFAVVRQVYDKHKDMDCALKIID-KSKLLGKKQMIENEVNILRSVNHPNIIKLLDE 443
IG+G + VV + +K ALK I ++ G E+++L+ +NHPNI+KLLD
Sbjct: 10 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDV 69
Query: 444 YDTNNELYLVIELIKGGDL--FDAISKNVKFSEEDSKFMTQSLASALSYLHDNYIVHRDI 501
T N+LYLV E + DL F S K L L++ H + ++HRD+
Sbjct: 70 IHTENKLYLVFEFLH-QDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDL 128
Query: 502 KPENLLVEMSGCHVKVLKVGDFGLAQRVLRPMFTVCG---TPTYVAPEI-LNESGYGVKI 557
KP+NLL+ G +K+ DFGLA+ P+ T T Y APEI L Y +
Sbjct: 129 KPQNLLINTEGA----IKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGCKYYSTAV 184
Query: 558 DVWAAGVILYILLCGFPPFVSDTNDQDELF----------DDILSGQYGFPS-----PYW 602
D+W+ G I ++ F D+ + D+LF + + G P P W
Sbjct: 185 DIWSLGCIFAEMVTRRALFPGDS-EIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFPKW 243
Query: 603 --DDIS-------EEAKELISHMLESNPDLRFSAEDVLDHPWLE 637
D S E+ + L+S ML +P+ R SA+ L HP+ +
Sbjct: 244 ARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQ 287
>pdb|3EZR|A Chain A, Cdk-2 With Indazole Inhibitor 17 Bound At Its Active Site
pdb|3EZV|A Chain A, Cdk-2 With Indazole Inhibitor 9 Bound At Its Active Site
Length = 300
Score = 105 bits (263), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 89/284 (31%), Positives = 133/284 (46%), Gaps = 37/284 (13%)
Query: 385 IGDGNFAVVRQVYDKHKDMDCALKIID-KSKLLGKKQMIENEVNILRSVNHPNIIKLLDE 443
IG+G + VV + +K ALK I ++ G E+++L+ +NHPNI+KLLD
Sbjct: 12 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDV 71
Query: 444 YDTNNELYLVIELIKGGDL--FDAISKNVKFSEEDSKFMTQSLASALSYLHDNYIVHRDI 501
T N+LYLV E + DL F S K L L++ H + ++HRD+
Sbjct: 72 IHTENKLYLVFEFLH-QDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDL 130
Query: 502 KPENLLVEMSGCHVKVLKVGDFGLAQRVLRPMFTVCG---TPTYVAPEI-LNESGYGVKI 557
KP+NLL+ G +K+ DFGLA+ P+ T T Y APEI L Y +
Sbjct: 131 KPQNLLINTEGA----IKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGCKYYSTAV 186
Query: 558 DVWAAGVILYILLCGFPPFVSDTNDQDELF----------DDILSGQYGFPS-----PYW 602
D+W+ G I ++ F D+ + D+LF + + G P P W
Sbjct: 187 DIWSLGCIFAEMVTRRALFPGDS-EIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFPKW 245
Query: 603 --DDIS-------EEAKELISHMLESNPDLRFSAEDVLDHPWLE 637
D S E+ + L+S ML +P+ R SA+ L HP+ +
Sbjct: 246 ARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQ 289
>pdb|3PXF|A Chain A, Cdk2 In Complex With Two Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXQ|A Chain A, Cdk2 In Complex With 3 Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXR|A Chain A, Apo Cdk2 Crystallized From Jeffamine
pdb|3PXY|A Chain A, Cdk2 In Complex With Inhibitor Jws648
pdb|3PXZ|A Chain A, Cdk2 Ternary Complex With Jws648 And Ans
pdb|3PY0|A Chain A, Cdk2 In Complex With Inhibitor Su9516
pdb|3PY1|A Chain A, Cdk2 Ternary Complex With Su9516 And Ans
pdb|3QL8|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-260
pdb|3QQF|A Chain A, Cdk2 In Complex With Inhibitor L1
pdb|3QQG|A Chain A, Cdk2 In Complex With Inhibitor L2-5
pdb|3QQH|A Chain A, Cdk2 In Complex With Inhibitor L2-2
pdb|3QQJ|A Chain A, Cdk2 In Complex With Inhibitor L2
pdb|3QQL|A Chain A, Cdk2 In Complex With Inhibitor L3
pdb|3QRT|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc2-55
pdb|3QRU|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-12
pdb|3QWJ|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-142
pdb|3QWK|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-150
pdb|3QX2|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-190
pdb|3QX4|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-78
pdb|3QXO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-84
pdb|3QZF|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-52
pdb|3QZG|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-76
pdb|3QZH|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-124
pdb|3QZI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-126
pdb|3R1Q|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-102
pdb|3R1S|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-127
pdb|3R1Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-134
pdb|3R28|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-140
pdb|3R6X|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-158
pdb|3R71|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-162
pdb|3R73|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-164
pdb|3R7E|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-67
pdb|3R7I|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-74
pdb|3R7U|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-75
pdb|3R7V|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-9
pdb|3R7Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-88
pdb|3R83|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-92
pdb|3R8L|A Chain A, Cdk2 In Complex With Inhibitor L3-4
pdb|3R8M|A Chain A, Cdk2 In Complex With Inhibitor L3-3
pdb|3R8P|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-6
pdb|3RAI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-160
pdb|3RM6|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-80
pdb|3RM7|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-91
pdb|3ROY|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-154
pdb|3RPO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-156
pdb|4EZ3|A Chain A, Cdk2 In Complex With Nsc 134199
pdb|4EZ7|A Chain A, Cdk2 In Complex With Staurosporine And 2 Molecules Of
8-Anilino-1- Naphthalene Sulfonic Acid
pdb|3QQK|A Chain A, Cdk2 In Complex With Inhibitor L4
pdb|3QTQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-137
pdb|3QTR|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-148
pdb|3QTS|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-12
pdb|3QTU|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-132
pdb|3QTW|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-13
pdb|3QTX|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-35
pdb|3QTZ|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-36
pdb|3QU0|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-38
pdb|3QXP|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
pdb|3R8U|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-132
pdb|3R8V|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-135
pdb|3R8Z|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-136
pdb|3R9D|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-135
pdb|3R9H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-142
pdb|3R9N|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-21
pdb|3R9O|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-143
pdb|3RAH|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-22
pdb|3RAK|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-32
pdb|3RAL|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-34
pdb|3RJC|A Chain A, Cdk2 In Complex With Inhibitor L4-12
pdb|3RK5|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-72
pdb|3RK7|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-71
pdb|3RK9|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-74
pdb|3RKB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-73
pdb|3RMF|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-33
pdb|3RNI|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-86
pdb|3RPR|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-49
pdb|3RPV|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-88
pdb|3RPY|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-40
pdb|3RZB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-23
pdb|3S00|A Chain A, Cdk2 In Complex With Inhibitor L4-14
pdb|3S0O|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-138
pdb|3S1H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-39
pdb|3SQQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-96
pdb|4GCJ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
Length = 306
Score = 105 bits (262), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 87/295 (29%), Positives = 137/295 (46%), Gaps = 37/295 (12%)
Query: 374 KLLQRYSVGQIIGDGNFAVVRQVYDKHKDMDCALKIID-KSKLLGKKQMIENEVNILRSV 432
+ ++ + + IG+G + VV + +K ALK I ++ G E+++L+ +
Sbjct: 7 EFMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKEL 66
Query: 433 NHPNIIKLLDEYDTNNELYLVIELIKGGDL--FDAISKNVKFSEEDSKFMTQSLASALSY 490
NHPNI+KLLD T N+LYLV E + DL F S K L L++
Sbjct: 67 NHPNIVKLLDVIHTENKLYLVFEFLH-QDLKKFMDASALTGIPLPLIKSYLFQLLQGLAF 125
Query: 491 LHDNYIVHRDIKPENLLVEMSGCHVKVLKVGDFGLAQRVLRPMFTVCG---TPTYVAPEI 547
H + ++HRD+KP+NLL+ G +K+ DFGLA+ P+ T T Y APEI
Sbjct: 126 CHSHRVLHRDLKPQNLLINTEGA----IKLADFGLARAFGVPVRTYTHEVVTLWYRAPEI 181
Query: 548 -LNESGYGVKIDVWAAGVILYILLCGFPPFVSDTNDQDELF----------DDILSGQYG 596
L Y +D+W+ G I ++ F D+ + D+LF + + G
Sbjct: 182 LLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDS-EIDQLFRIFRTLGTPDEVVWPGVTS 240
Query: 597 FPS-----PYW---------DDISEEAKELISHMLESNPDLRFSAEDVLDHPWLE 637
P P W + E+ + L+S ML +P+ R SA+ L HP+ +
Sbjct: 241 MPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQ 295
>pdb|4EOS|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
pdb|4EOS|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
Length = 300
Score = 105 bits (262), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 87/284 (30%), Positives = 132/284 (46%), Gaps = 37/284 (13%)
Query: 385 IGDGNFAVVRQVYDKHKDMDCALKIID-KSKLLGKKQMIENEVNILRSVNHPNIIKLLDE 443
IG+G + VV + +K ALK I ++ G E+++L+ +NHPNI+KLLD
Sbjct: 13 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDV 72
Query: 444 YDTNNELYLVIELIKGGDL--FDAISKNVKFSEEDSKFMTQSLASALSYLHDNYIVHRDI 501
T N+LYLV E + DL F S K L L++ H + ++HRD+
Sbjct: 73 IHTENKLYLVFEFLH-QDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDL 131
Query: 502 KPENLLVEMSGCHVKVLKVGDFGLAQRVLRPMFTV---CGTPTYVAPEI-LNESGYGVKI 557
KP+NLL+ G +K+ DFGLA+ P+ T T Y APEI L Y +
Sbjct: 132 KPQNLLINTEGA----IKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKYYSTAV 187
Query: 558 DVWAAGVILYILLCGFPPFVSDTNDQDELF----------DDILSGQYGFPS-----PYW 602
D+W+ G I ++ F D+ + D+LF + + G P P W
Sbjct: 188 DIWSLGCIFAEMVTRRALFPGDS-EIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFPKW 246
Query: 603 ---------DDISEEAKELISHMLESNPDLRFSAEDVLDHPWLE 637
+ E+ + L+S ML +P+ R SA+ L HP+ +
Sbjct: 247 ARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQ 290
>pdb|1JST|A Chain A, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JST|C Chain C, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JSU|A Chain A, P27(Kip1)CYCLIN ACDK2 COMPLEX
pdb|1FQ1|B Chain B, Crystal Structure Of Kinase Associated Phosphatase (Kap)
In Complex With Phospho-Cdk2
pdb|2C6T|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6T|C Chain C, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2CJM|A Chain A, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2CJM|C Chain C, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2UZB|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZB|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|4II5|A Chain A, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
pdb|4II5|C Chain C, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
Length = 298
Score = 105 bits (262), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 89/284 (31%), Positives = 133/284 (46%), Gaps = 37/284 (13%)
Query: 385 IGDGNFAVVRQVYDKHKDMDCALKIID-KSKLLGKKQMIENEVNILRSVNHPNIIKLLDE 443
IG+G + VV + +K ALK I ++ G E+++L+ +NHPNI+KLLD
Sbjct: 10 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDV 69
Query: 444 YDTNNELYLVIELIKGGDL--FDAISKNVKFSEEDSKFMTQSLASALSYLHDNYIVHRDI 501
T N+LYLV E + DL F S K L L++ H + ++HRD+
Sbjct: 70 IHTENKLYLVFEFLH-QDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDL 128
Query: 502 KPENLLVEMSGCHVKVLKVGDFGLAQRVLRPMFTV---CGTPTYVAPEI-LNESGYGVKI 557
KP+NLL+ G +K+ DFGLA+ P+ T T Y APEI L Y +
Sbjct: 129 KPQNLLINTEGA----IKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKYYSTAV 184
Query: 558 DVWAAGVILYILLCGFPPFVSDTNDQDELF----------DDILSGQYGFPS-----PYW 602
D+W+ G I ++ F D+ + D+LF + + G P P W
Sbjct: 185 DIWSLGCIFAEMVTRRALFPGDS-EIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFPKW 243
Query: 603 --DDIS-------EEAKELISHMLESNPDLRFSAEDVLDHPWLE 637
D S E+ + L+S ML +P+ R SA+ L HP+ +
Sbjct: 244 ARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQ 287
>pdb|1VYW|A Chain A, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|1VYW|C Chain C, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|2C4G|A Chain A, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2C4G|C Chain C, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2BPM|A Chain A, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BPM|C Chain C, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BKZ|A Chain A, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2BKZ|C Chain C, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2WIH|A Chain A, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIH|C Chain C, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIP|A Chain A, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WIP|C Chain C, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WPA|A Chain A, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WPA|C Chain C, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WXV|A Chain A, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
pdb|2WXV|C Chain C, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
Length = 309
Score = 105 bits (262), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 87/284 (30%), Positives = 132/284 (46%), Gaps = 37/284 (13%)
Query: 385 IGDGNFAVVRQVYDKHKDMDCALKIID-KSKLLGKKQMIENEVNILRSVNHPNIIKLLDE 443
IG+G + VV + +K ALK I ++ G E+++L+ +NHPNI+KLLD
Sbjct: 15 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDV 74
Query: 444 YDTNNELYLVIELIKGGDL--FDAISKNVKFSEEDSKFMTQSLASALSYLHDNYIVHRDI 501
T N+LYLV E + DL F S K L L++ H + ++HRD+
Sbjct: 75 IHTENKLYLVFEFLH-QDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDL 133
Query: 502 KPENLLVEMSGCHVKVLKVGDFGLAQRVLRPMFTVCG---TPTYVAPEI-LNESGYGVKI 557
KP+NLL+ G +K+ DFGLA+ P+ T T Y APEI L Y +
Sbjct: 134 KPQNLLINTEGA----IKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGCKYYSTAV 189
Query: 558 DVWAAGVILYILLCGFPPFVSDTNDQDELF----------DDILSGQYGFPS-----PYW 602
D+W+ G I ++ F D+ + D+LF + + G P P W
Sbjct: 190 DIWSLGCIFAEMVTRRALFPGDS-EIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFPKW 248
Query: 603 ---------DDISEEAKELISHMLESNPDLRFSAEDVLDHPWLE 637
+ E+ + L+S ML +P+ R SA+ L HP+ +
Sbjct: 249 ARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQ 292
>pdb|1E9H|A Chain A, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1E9H|C Chain C, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1PKD|A Chain A, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
pdb|1PKD|C Chain C, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
Length = 297
Score = 105 bits (262), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 89/284 (31%), Positives = 133/284 (46%), Gaps = 37/284 (13%)
Query: 385 IGDGNFAVVRQVYDKHKDMDCALKIID-KSKLLGKKQMIENEVNILRSVNHPNIIKLLDE 443
IG+G + VV + +K ALK I ++ G E+++L+ +NHPNI+KLLD
Sbjct: 11 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDV 70
Query: 444 YDTNNELYLVIELIKGGDL--FDAISKNVKFSEEDSKFMTQSLASALSYLHDNYIVHRDI 501
T N+LYLV E + DL F S K L L++ H + ++HRD+
Sbjct: 71 IHTENKLYLVFEFLH-QDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDL 129
Query: 502 KPENLLVEMSGCHVKVLKVGDFGLAQRVLRPMFTV---CGTPTYVAPEI-LNESGYGVKI 557
KP+NLL+ G +K+ DFGLA+ P+ T T Y APEI L Y +
Sbjct: 130 KPQNLLINTEGA----IKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKYYSTAV 185
Query: 558 DVWAAGVILYILLCGFPPFVSDTNDQDELF----------DDILSGQYGFPS-----PYW 602
D+W+ G I ++ F D+ + D+LF + + G P P W
Sbjct: 186 DIWSLGCIFAEMVTRRALFPGDS-EIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFPKW 244
Query: 603 --DDIS-------EEAKELISHMLESNPDLRFSAEDVLDHPWLE 637
D S E+ + L+S ML +P+ R SA+ L HP+ +
Sbjct: 245 ARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQ 288
>pdb|1QMZ|A Chain A, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1QMZ|C Chain C, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1GY3|A Chain A, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1GY3|C Chain C, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1P5E|A Chain A, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|1P5E|C Chain C, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|2CCH|A Chain A, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCH|C Chain C, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCI|A Chain A, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2CCI|C Chain C, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2G9X|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|2G9X|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|3DDP|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDP|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDQ|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DDQ|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DOG|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
pdb|3DOG|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
Length = 299
Score = 105 bits (262), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 89/284 (31%), Positives = 133/284 (46%), Gaps = 37/284 (13%)
Query: 385 IGDGNFAVVRQVYDKHKDMDCALKIID-KSKLLGKKQMIENEVNILRSVNHPNIIKLLDE 443
IG+G + VV + +K ALK I ++ G E+++L+ +NHPNI+KLLD
Sbjct: 11 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDV 70
Query: 444 YDTNNELYLVIELIKGGDL--FDAISKNVKFSEEDSKFMTQSLASALSYLHDNYIVHRDI 501
T N+LYLV E + DL F S K L L++ H + ++HRD+
Sbjct: 71 IHTENKLYLVFEFLH-QDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDL 129
Query: 502 KPENLLVEMSGCHVKVLKVGDFGLAQRVLRPMFTV---CGTPTYVAPEI-LNESGYGVKI 557
KP+NLL+ G +K+ DFGLA+ P+ T T Y APEI L Y +
Sbjct: 130 KPQNLLINTEGA----IKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKYYSTAV 185
Query: 558 DVWAAGVILYILLCGFPPFVSDTNDQDELF----------DDILSGQYGFPS-----PYW 602
D+W+ G I ++ F D+ + D+LF + + G P P W
Sbjct: 186 DIWSLGCIFAEMVTRRALFPGDS-EIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFPKW 244
Query: 603 --DDIS-------EEAKELISHMLESNPDLRFSAEDVLDHPWLE 637
D S E+ + L+S ML +P+ R SA+ L HP+ +
Sbjct: 245 ARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQ 288
>pdb|3BHT|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHT|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHU|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHU|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHV|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3BHV|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3MY5|A Chain A, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3MY5|C Chain C, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3TNW|A Chain A, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|3TNW|C Chain C, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|4BCO|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCO|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 300
Score = 105 bits (262), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 89/284 (31%), Positives = 133/284 (46%), Gaps = 37/284 (13%)
Query: 385 IGDGNFAVVRQVYDKHKDMDCALKIID-KSKLLGKKQMIENEVNILRSVNHPNIIKLLDE 443
IG+G + VV + +K ALK I ++ G E+++L+ +NHPNI+KLLD
Sbjct: 12 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDV 71
Query: 444 YDTNNELYLVIELIKGGDL--FDAISKNVKFSEEDSKFMTQSLASALSYLHDNYIVHRDI 501
T N+LYLV E + DL F S K L L++ H + ++HRD+
Sbjct: 72 IHTENKLYLVFEFLH-QDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDL 130
Query: 502 KPENLLVEMSGCHVKVLKVGDFGLAQRVLRPMFTV---CGTPTYVAPEI-LNESGYGVKI 557
KP+NLL+ G +K+ DFGLA+ P+ T T Y APEI L Y +
Sbjct: 131 KPQNLLINTEGA----IKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKYYSTAV 186
Query: 558 DVWAAGVILYILLCGFPPFVSDTNDQDELF----------DDILSGQYGFPS-----PYW 602
D+W+ G I ++ F D+ + D+LF + + G P P W
Sbjct: 187 DIWSLGCIFAEMVTRRALFPGDS-EIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFPKW 245
Query: 603 --DDIS-------EEAKELISHMLESNPDLRFSAEDVLDHPWLE 637
D S E+ + L+S ML +P+ R SA+ L HP+ +
Sbjct: 246 ARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQ 289
>pdb|1W98|A Chain A, The Structural Basis Of Cdk2 Activation By Cyclin E
pdb|4EOR|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
pdb|4EOR|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
Length = 298
Score = 105 bits (262), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 89/284 (31%), Positives = 133/284 (46%), Gaps = 37/284 (13%)
Query: 385 IGDGNFAVVRQVYDKHKDMDCALKIID-KSKLLGKKQMIENEVNILRSVNHPNIIKLLDE 443
IG+G + VV + +K ALK I ++ G E+++L+ +NHPNI+KLLD
Sbjct: 11 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDV 70
Query: 444 YDTNNELYLVIELIKGGDL--FDAISKNVKFSEEDSKFMTQSLASALSYLHDNYIVHRDI 501
T N+LYLV E + DL F S K L L++ H + ++HRD+
Sbjct: 71 IHTENKLYLVFEFLH-QDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDL 129
Query: 502 KPENLLVEMSGCHVKVLKVGDFGLAQRVLRPMFTV---CGTPTYVAPEI-LNESGYGVKI 557
KP+NLL+ G +K+ DFGLA+ P+ T T Y APEI L Y +
Sbjct: 130 KPQNLLINTEGA----IKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKYYSTAV 185
Query: 558 DVWAAGVILYILLCGFPPFVSDTNDQDELF----------DDILSGQYGFPS-----PYW 602
D+W+ G I ++ F D+ + D+LF + + G P P W
Sbjct: 186 DIWSLGCIFAEMVTRRALFPGDS-EIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFPKW 244
Query: 603 --DDIS-------EEAKELISHMLESNPDLRFSAEDVLDHPWLE 637
D S E+ + L+S ML +P+ R SA+ L HP+ +
Sbjct: 245 ARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQ 288
>pdb|3DAK|A Chain A, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|B Chain B, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|C Chain C, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|D Chain D, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
Length = 290
Score = 105 bits (262), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 76/292 (26%), Positives = 135/292 (46%), Gaps = 45/292 (15%)
Query: 379 YSVGQIIGDGNFAVVRQVYDKHKDMDCALKIIDKSKLLGKKQMIENEVNILRSVNHPNII 438
Y + ++IG G AVV+ Y K A+K I+ K + E+ + +HPNI+
Sbjct: 12 YELQEVIGSGATAVVQAAYCAPKKEKVAIKRINLEKCQTSMDELLKEIQAMSQCHHPNIV 71
Query: 439 KLLDEYDTNNELYLVIELIKGGDLFDAISKNVKFSEEDSKFMTQS--------LASALSY 490
+ +EL+LV++L+ GG + D I V E S + +S + L Y
Sbjct: 72 SYYTSFVVKDELWLVMKLLSGGSVLDIIKHIVAKGEHKSGVLDESTIATILREVLEGLEY 131
Query: 491 LHDNYIVHRDIKPENLLVEMSGCHVKVLKVGDFGLAQRVL--------RPMFTVCGTPTY 542
LH N +HRD+K N+L+ G +++ DFG++ + + T GTP +
Sbjct: 132 LHKNGQIHRDVKAGNILLGEDGS----VQIADFGVSAFLATGGDITRNKVRKTFVGTPCW 187
Query: 543 VAPEILNE-SGYGVKIDVWAAGVILYILLCGFPPF----------VSDTNDQDEL----F 587
+APE++ + GY K D+W+ G+ L G P+ ++ ND L
Sbjct: 188 MAPEVMEQVRGYDFKADIWSFGITAIELATGAAPYHKYPPMKVLMLTLQNDPPSLETGVQ 247
Query: 588 DDILSGQYGFPSPYWDDISEEAKELISHMLESNPDLRFSAEDVLDHPWLERS 639
D + +YG + +++IS L+ +P+ R +A ++L H + +++
Sbjct: 248 DKEMLKKYG----------KSFRKMISLCLQKDPEKRPTAAELLRHKFFQKA 289
>pdb|4EOQ|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
pdb|4EOQ|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
Length = 301
Score = 105 bits (262), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 87/284 (30%), Positives = 132/284 (46%), Gaps = 37/284 (13%)
Query: 385 IGDGNFAVVRQVYDKHKDMDCALKIID-KSKLLGKKQMIENEVNILRSVNHPNIIKLLDE 443
IG+G + VV + +K ALK I ++ G E+++L+ +NHPNI+KLLD
Sbjct: 14 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDV 73
Query: 444 YDTNNELYLVIELIKGGDL--FDAISKNVKFSEEDSKFMTQSLASALSYLHDNYIVHRDI 501
T N+LYLV E + DL F S K L L++ H + ++HRD+
Sbjct: 74 IHTENKLYLVFEFLH-QDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDL 132
Query: 502 KPENLLVEMSGCHVKVLKVGDFGLAQRVLRPMFTV---CGTPTYVAPEI-LNESGYGVKI 557
KP+NLL+ G +K+ DFGLA+ P+ T T Y APEI L Y +
Sbjct: 133 KPQNLLINTEGA----IKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKYYSTAV 188
Query: 558 DVWAAGVILYILLCGFPPFVSDTNDQDELF----------DDILSGQYGFPS-----PYW 602
D+W+ G I ++ F D+ + D+LF + + G P P W
Sbjct: 189 DIWSLGCIFAEMVTRRALFPGDS-EIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFPKW 247
Query: 603 ---------DDISEEAKELISHMLESNPDLRFSAEDVLDHPWLE 637
+ E+ + L+S ML +P+ R SA+ L HP+ +
Sbjct: 248 ARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQ 291
>pdb|4BCQ|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCQ|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 301
Score = 105 bits (262), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 87/284 (30%), Positives = 132/284 (46%), Gaps = 37/284 (13%)
Query: 385 IGDGNFAVVRQVYDKHKDMDCALKIID-KSKLLGKKQMIENEVNILRSVNHPNIIKLLDE 443
IG+G + VV + +K ALK I ++ G E+++L+ +NHPNI+KLLD
Sbjct: 13 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDV 72
Query: 444 YDTNNELYLVIELIKGGDL--FDAISKNVKFSEEDSKFMTQSLASALSYLHDNYIVHRDI 501
T N+LYLV E + DL F S K L L++ H + ++HRD+
Sbjct: 73 IHTENKLYLVFEFLH-QDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDL 131
Query: 502 KPENLLVEMSGCHVKVLKVGDFGLAQRVLRPMFTV---CGTPTYVAPEI-LNESGYGVKI 557
KP+NLL+ G +K+ DFGLA+ P+ T T Y APEI L Y +
Sbjct: 132 KPQNLLINTEGA----IKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKYYSTAV 187
Query: 558 DVWAAGVILYILLCGFPPFVSDTNDQDELF----------DDILSGQYGFPS-----PYW 602
D+W+ G I ++ F D+ + D+LF + + G P P W
Sbjct: 188 DIWSLGCIFAEMVTRRALFPGDS-EIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFPKW 246
Query: 603 ---------DDISEEAKELISHMLESNPDLRFSAEDVLDHPWLE 637
+ E+ + L+S ML +P+ R SA+ L HP+ +
Sbjct: 247 ARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQ 290
>pdb|1MG4|A Chain A, Structure Of N-Terminal Doublecortin Domain From Dclk:
Wild Type Protein
Length = 113
Score = 105 bits (261), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 47/99 (47%), Positives = 78/99 (78%), Gaps = 2/99 (2%)
Query: 98 RRAKRIRFLCNGDKFFKGVVMAVGPERYRSFDSLLEELTRALAENINLPSGVRILFTMDG 157
++AK++RF NGD++FKG+V A+ P+R+RSF++LL +LTR L++N+NLP GVR ++T+DG
Sbjct: 13 KKAKKVRFYRNGDRYFKGIVYAISPDRFRSFEALLADLTRTLSDNVNLPQGVRTIYTIDG 72
Query: 158 -QKVTNIDELEDGKFYICSSSGDQFKKVDYAILNNNNSS 195
+K++++D+L +G+ Y+C S + FKK++Y N N S
Sbjct: 73 LKKISSLDQLVEGESYVCGSI-EPFKKLEYTKNVNPNWS 110
>pdb|2VWI|A Chain A, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|B Chain B, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|C Chain C, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|D Chain D, Structure Of The Osr1 Kinase, A Hypertension Drug Target
Length = 303
Score = 105 bits (261), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 76/292 (26%), Positives = 135/292 (46%), Gaps = 45/292 (15%)
Query: 379 YSVGQIIGDGNFAVVRQVYDKHKDMDCALKIIDKSKLLGKKQMIENEVNILRSVNHPNII 438
Y + ++IG G AVV+ Y K A+K I+ K + E+ + +HPNI+
Sbjct: 17 YELQEVIGSGATAVVQAAYCAPKKEKVAIKRINLEKCQTSMDELLKEIQAMSQCHHPNIV 76
Query: 439 KLLDEYDTNNELYLVIELIKGGDLFDAISKNVKFSEEDSKFMTQS--------LASALSY 490
+ +EL+LV++L+ GG + D I V E S + +S + L Y
Sbjct: 77 SYYTSFVVKDELWLVMKLLSGGSVLDIIKHIVAKGEHKSGVLDESTIATILREVLEGLEY 136
Query: 491 LHDNYIVHRDIKPENLLVEMSGCHVKVLKVGDFGLAQRVL--------RPMFTVCGTPTY 542
LH N +HRD+K N+L+ G +++ DFG++ + + T GTP +
Sbjct: 137 LHKNGQIHRDVKAGNILLGEDGS----VQIADFGVSAFLATGGDITRNKVRKTFVGTPCW 192
Query: 543 VAPEILNE-SGYGVKIDVWAAGVILYILLCGFPPF----------VSDTNDQDEL----F 587
+APE++ + GY K D+W+ G+ L G P+ ++ ND L
Sbjct: 193 MAPEVMEQVRGYDFKADIWSFGITAIELATGAAPYHKYPPMKVLMLTLQNDPPSLETGVQ 252
Query: 588 DDILSGQYGFPSPYWDDISEEAKELISHMLESNPDLRFSAEDVLDHPWLERS 639
D + +YG + +++IS L+ +P+ R +A ++L H + +++
Sbjct: 253 DKEMLKKYG----------KSFRKMISLCLQKDPEKRPTAAELLRHKFFQKA 294
>pdb|1H1P|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1P|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1Q|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1Q|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1R|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1R|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1S|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H1S|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H24|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H24|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H25|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H25|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H26|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H26|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H27|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H27|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H28|A Chain A, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|1H28|C Chain C, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|2WMA|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMA|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
Length = 303
Score = 105 bits (261), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 89/284 (31%), Positives = 133/284 (46%), Gaps = 37/284 (13%)
Query: 385 IGDGNFAVVRQVYDKHKDMDCALKIID-KSKLLGKKQMIENEVNILRSVNHPNIIKLLDE 443
IG+G + VV + +K ALK I ++ G E+++L+ +NHPNI+KLLD
Sbjct: 15 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDV 74
Query: 444 YDTNNELYLVIELIKGGDL--FDAISKNVKFSEEDSKFMTQSLASALSYLHDNYIVHRDI 501
T N+LYLV E + DL F S K L L++ H + ++HRD+
Sbjct: 75 IHTENKLYLVFEFLH-QDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDL 133
Query: 502 KPENLLVEMSGCHVKVLKVGDFGLAQRVLRPMFTV---CGTPTYVAPEI-LNESGYGVKI 557
KP+NLL+ G +K+ DFGLA+ P+ T T Y APEI L Y +
Sbjct: 134 KPQNLLINTEGA----IKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKYYSTAV 189
Query: 558 DVWAAGVILYILLCGFPPFVSDTNDQDELF----------DDILSGQYGFPS-----PYW 602
D+W+ G I ++ F D+ + D+LF + + G P P W
Sbjct: 190 DIWSLGCIFAEMVTRRALFPGDS-EIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFPKW 248
Query: 603 --DDIS-------EEAKELISHMLESNPDLRFSAEDVLDHPWLE 637
D S E+ + L+S ML +P+ R SA+ L HP+ +
Sbjct: 249 ARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQ 292
>pdb|2IW6|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW6|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
Length = 302
Score = 105 bits (261), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 89/284 (31%), Positives = 133/284 (46%), Gaps = 37/284 (13%)
Query: 385 IGDGNFAVVRQVYDKHKDMDCALKIID-KSKLLGKKQMIENEVNILRSVNHPNIIKLLDE 443
IG+G + VV + +K ALK I ++ G E+++L+ +NHPNI+KLLD
Sbjct: 14 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDV 73
Query: 444 YDTNNELYLVIELIKGGDL--FDAISKNVKFSEEDSKFMTQSLASALSYLHDNYIVHRDI 501
T N+LYLV E + DL F S K L L++ H + ++HRD+
Sbjct: 74 IHTENKLYLVFEFLH-QDLKTFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDL 132
Query: 502 KPENLLVEMSGCHVKVLKVGDFGLAQRVLRPMFTV---CGTPTYVAPEI-LNESGYGVKI 557
KP+NLL+ G +K+ DFGLA+ P+ T T Y APEI L Y +
Sbjct: 133 KPQNLLINTEGA----IKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKYYSTAV 188
Query: 558 DVWAAGVILYILLCGFPPFVSDTNDQDELF----------DDILSGQYGFPS-----PYW 602
D+W+ G I ++ F D+ + D+LF + + G P P W
Sbjct: 189 DIWSLGCIFAEMVTRRALFPGDS-EIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFPKW 247
Query: 603 --DDIS-------EEAKELISHMLESNPDLRFSAEDVLDHPWLE 637
D S E+ + L+S ML +P+ R SA+ L HP+ +
Sbjct: 248 ARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQ 291
>pdb|1OGU|A Chain A, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OGU|C Chain C, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OI9|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OI9|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
Length = 302
Score = 105 bits (261), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 89/284 (31%), Positives = 133/284 (46%), Gaps = 37/284 (13%)
Query: 385 IGDGNFAVVRQVYDKHKDMDCALKIID-KSKLLGKKQMIENEVNILRSVNHPNIIKLLDE 443
IG+G + VV + +K ALK I ++ G E+++L+ +NHPNI+KLLD
Sbjct: 14 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDV 73
Query: 444 YDTNNELYLVIELIKGGDL--FDAISKNVKFSEEDSKFMTQSLASALSYLHDNYIVHRDI 501
T N+LYLV E + DL F S K L L++ H + ++HRD+
Sbjct: 74 IHTENKLYLVFEFLH-QDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDL 132
Query: 502 KPENLLVEMSGCHVKVLKVGDFGLAQRVLRPMFTV---CGTPTYVAPEI-LNESGYGVKI 557
KP+NLL+ G +K+ DFGLA+ P+ T T Y APEI L Y +
Sbjct: 133 KPQNLLINTEGA----IKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKYYSTAV 188
Query: 558 DVWAAGVILYILLCGFPPFVSDTNDQDELF----------DDILSGQYGFPS-----PYW 602
D+W+ G I ++ F D+ + D+LF + + G P P W
Sbjct: 189 DIWSLGCIFAEMVTRRALFPGDS-EIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFPKW 247
Query: 603 --DDIS-------EEAKELISHMLESNPDLRFSAEDVLDHPWLE 637
D S E+ + L+S ML +P+ R SA+ L HP+ +
Sbjct: 248 ARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQ 291
>pdb|4I3Z|A Chain A, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
pdb|4I3Z|C Chain C, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
Length = 296
Score = 105 bits (261), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 89/284 (31%), Positives = 133/284 (46%), Gaps = 37/284 (13%)
Query: 385 IGDGNFAVVRQVYDKHKDMDCALKIID-KSKLLGKKQMIENEVNILRSVNHPNIIKLLDE 443
IG+G + VV + +K ALK I ++ G E+++L+ +NHPNI+KLLD
Sbjct: 10 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDV 69
Query: 444 YDTNNELYLVIELIKGGDL--FDAISKNVKFSEEDSKFMTQSLASALSYLHDNYIVHRDI 501
T N+LYLV E + DL F S K L L++ H + ++HRD+
Sbjct: 70 IHTENKLYLVFEFLH-QDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDL 128
Query: 502 KPENLLVEMSGCHVKVLKVGDFGLAQRVLRPMFTV---CGTPTYVAPEI-LNESGYGVKI 557
KP+NLL+ G +K+ DFGLA+ P+ T T Y APEI L Y +
Sbjct: 129 KPQNLLINTEGA----IKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKYYSTAV 184
Query: 558 DVWAAGVILYILLCGFPPFVSDTNDQDELF----------DDILSGQYGFPS-----PYW 602
D+W+ G I ++ F D+ + D+LF + + G P P W
Sbjct: 185 DIWSLGCIFAEMVTRRALFPGDS-EIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFPKW 243
Query: 603 --DDIS-------EEAKELISHMLESNPDLRFSAEDVLDHPWLE 637
D S E+ + L+S ML +P+ R SA+ L HP+ +
Sbjct: 244 ARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQ 287
>pdb|3QHR|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHR|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
Length = 298
Score = 105 bits (261), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 89/284 (31%), Positives = 133/284 (46%), Gaps = 37/284 (13%)
Query: 385 IGDGNFAVVRQVYDKHKDMDCALKIID-KSKLLGKKQMIENEVNILRSVNHPNIIKLLDE 443
IG+G + VV + +K ALK I ++ G E+++L+ +NHPNI+KLLD
Sbjct: 12 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDV 71
Query: 444 YDTNNELYLVIELIKGGDL--FDAISKNVKFSEEDSKFMTQSLASALSYLHDNYIVHRDI 501
T N+LYLV E + DL F S K L L++ H + ++HRD+
Sbjct: 72 IHTENKLYLVFEFLH-QDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDL 130
Query: 502 KPENLLVEMSGCHVKVLKVGDFGLAQRVLRPMFTV---CGTPTYVAPEI-LNESGYGVKI 557
KP+NLL+ G +K+ DFGLA+ P+ T T Y APEI L Y +
Sbjct: 131 KPQNLLINTEGA----IKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKYYSTAV 186
Query: 558 DVWAAGVILYILLCGFPPFVSDTNDQDELF----------DDILSGQYGFPS-----PYW 602
D+W+ G I ++ F D+ + D+LF + + G P P W
Sbjct: 187 DIWSLGCIFAEMVTRRALFPGDS-EIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFPKW 245
Query: 603 --DDIS-------EEAKELISHMLESNPDLRFSAEDVLDHPWLE 637
D S E+ + L+S ML +P+ R SA+ L HP+ +
Sbjct: 246 ARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQ 289
>pdb|2JGZ|A Chain A, Crystal Structure Of Phospho-Cdk2 In Complex With Cyclin B
Length = 289
Score = 105 bits (261), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 89/284 (31%), Positives = 133/284 (46%), Gaps = 37/284 (13%)
Query: 385 IGDGNFAVVRQVYDKHKDMDCALKIID-KSKLLGKKQMIENEVNILRSVNHPNIIKLLDE 443
IG+G + VV + +K ALK I ++ G E+++L+ +NHPNI+KLLD
Sbjct: 11 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDV 70
Query: 444 YDTNNELYLVIELIKGGDL--FDAISKNVKFSEEDSKFMTQSLASALSYLHDNYIVHRDI 501
T N+LYLV E + DL F S K L L++ H + ++HRD+
Sbjct: 71 IHTENKLYLVFEFLH-QDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDL 129
Query: 502 KPENLLVEMSGCHVKVLKVGDFGLAQRVLRPMFTV---CGTPTYVAPEI-LNESGYGVKI 557
KP+NLL+ G +K+ DFGLA+ P+ T T Y APEI L Y +
Sbjct: 130 KPQNLLINTEGA----IKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKYYSTAV 185
Query: 558 DVWAAGVILYILLCGFPPFVSDTNDQDELF----------DDILSGQYGFPS-----PYW 602
D+W+ G I ++ F D+ + D+LF + + G P P W
Sbjct: 186 DIWSLGCIFAEMVTRRALFPGDS-EIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFPKW 244
Query: 603 --DDIS-------EEAKELISHMLESNPDLRFSAEDVLDHPWLE 637
D S E+ + L+S ML +P+ R SA+ L HP+ +
Sbjct: 245 ARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQ 288
>pdb|1OIR|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
Length = 299
Score = 105 bits (261), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 89/284 (31%), Positives = 133/284 (46%), Gaps = 37/284 (13%)
Query: 385 IGDGNFAVVRQVYDKHKDMDCAL-KIIDKSKLLGKKQMIENEVNILRSVNHPNIIKLLDE 443
IG+G + VV + +K AL KI ++ G E+++L+ +NHPNI+KLLD
Sbjct: 11 IGEGTYGVVYKARNKLTGEVVALXKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDV 70
Query: 444 YDTNNELYLVIELIKGGDL--FDAISKNVKFSEEDSKFMTQSLASALSYLHDNYIVHRDI 501
T N+LYLV E + DL F S K L L++ H + ++HRD+
Sbjct: 71 IHTENKLYLVFEFLH-QDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDL 129
Query: 502 KPENLLVEMSGCHVKVLKVGDFGLAQRVLRPMFTVCG---TPTYVAPEI-LNESGYGVKI 557
KP+NLL+ G +K+ DFGLA+ P+ T T Y APEI L Y +
Sbjct: 130 KPQNLLINTEGA----IKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGCKYYSTAV 185
Query: 558 DVWAAGVILYILLCGFPPFVSDTNDQDELF----------DDILSGQYGFPS-----PYW 602
D+W+ G I ++ F D+ + D+LF + + G P P W
Sbjct: 186 DIWSLGCIFAEMVTRRALFPGDS-EIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFPKW 244
Query: 603 --DDIS-------EEAKELISHMLESNPDLRFSAEDVLDHPWLE 637
D S E+ + L+S ML +P+ R SA+ L HP+ +
Sbjct: 245 ARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQ 288
>pdb|1H01|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
Length = 298
Score = 105 bits (261), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 89/284 (31%), Positives = 133/284 (46%), Gaps = 37/284 (13%)
Query: 385 IGDGNFAVVRQVYDKHKDMDCAL-KIIDKSKLLGKKQMIENEVNILRSVNHPNIIKLLDE 443
IG+G + VV + +K AL KI ++ G E+++L+ +NHPNI+KLLD
Sbjct: 10 IGEGTYGVVYKARNKLTGEVVALXKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDV 69
Query: 444 YDTNNELYLVIELIKGGDL--FDAISKNVKFSEEDSKFMTQSLASALSYLHDNYIVHRDI 501
T N+LYLV E + DL F S K L L++ H + ++HRD+
Sbjct: 70 IHTENKLYLVFEFLH-QDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDL 128
Query: 502 KPENLLVEMSGCHVKVLKVGDFGLAQRVLRPMFTVCG---TPTYVAPEI-LNESGYGVKI 557
KP+NLL+ G +K+ DFGLA+ P+ T T Y APEI L Y +
Sbjct: 129 KPQNLLINTEGA----IKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGCKYYSTAV 184
Query: 558 DVWAAGVILYILLCGFPPFVSDTNDQDELF----------DDILSGQYGFPS-----PYW 602
D+W+ G I ++ F D+ + D+LF + + G P P W
Sbjct: 185 DIWSLGCIFAEMVTRRALFPGDS-EIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFPKW 243
Query: 603 --DDIS-------EEAKELISHMLESNPDLRFSAEDVLDHPWLE 637
D S E+ + L+S ML +P+ R SA+ L HP+ +
Sbjct: 244 ARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQ 287
>pdb|1GII|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1GIJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|2DS1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
Length = 298
Score = 105 bits (261), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 89/284 (31%), Positives = 133/284 (46%), Gaps = 37/284 (13%)
Query: 385 IGDGNFAVVRQVYDKHKDMDCALKIID-KSKLLGKKQMIENEVNILRSVNHPNIIKLLDE 443
IG+G + VV + +K ALK I ++ G E+++L+ +NHPNI+KLLD
Sbjct: 10 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDV 69
Query: 444 YDTNNELYLVIELIKGGDL--FDAISKNVKFSEEDSKFMTQSLASALSYLHDNYIVHRDI 501
T N+LYLV E + DL F S K L L++ H + ++HRD+
Sbjct: 70 IHTENKLYLVFEHVH-QDLKTFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDL 128
Query: 502 KPENLLVEMSGCHVKVLKVGDFGLAQRVLRPMFTVCG---TPTYVAPEI-LNESGYGVKI 557
KP+NLL+ G +K+ DFGLA+ P+ T T Y APEI L Y +
Sbjct: 129 KPQNLLINTEGA----IKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGCKYYSTAV 184
Query: 558 DVWAAGVILYILLCGFPPFVSDTNDQDELF----------DDILSGQYGFPS-----PYW 602
D+W+ G I ++ F D+ + D+LF + + G P P W
Sbjct: 185 DIWSLGCIFAEMVTRRALFPGDS-EIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFPKW 243
Query: 603 --DDIS-------EEAKELISHMLESNPDLRFSAEDVLDHPWLE 637
D S E+ + L+S ML +P+ R SA+ L HP+ +
Sbjct: 244 ARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQ 287
>pdb|1YXS|A Chain A, Crystal Structure Of Kinase Pim1 With P123m Mutation
Length = 293
Score = 104 bits (260), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 75/272 (27%), Positives = 135/272 (49%), Gaps = 23/272 (8%)
Query: 375 LLQRYSVGQIIGDGNFAVVRQVYDKHKDMDCALKIIDKSKL-----LGKKQMIENEVNIL 429
L +Y VG ++G G F V ++ A+K ++K ++ L + EV +L
Sbjct: 6 LESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLL 65
Query: 430 RSVNH--PNIIKLLDEYDTNNELYLVIELIKG-GDLFDAISKNVKFSEEDSKFMTQSLAS 486
+ V+ +I+LLD ++ + L++E ++ DLFD I++ EE ++ +
Sbjct: 66 KKVSSGFSGVIRLLDWFERPDSFVLILERMEPVQDLFDFITERGALQEELARSFFWQVLE 125
Query: 487 ALSYLHDNYIVHRDIKPENLLVEMSGCHVKVLKVGDFGLAQRVLRPMFTVCGTPTYVAPE 546
A+ + H+ ++HRDIK EN+L++++ +K++ G L + + F GT Y PE
Sbjct: 126 AVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTDFD--GTRVYSPPE 183
Query: 547 ILNESGY-GVKIDVWAAGVILYILLCGFPPFVSDTNDQDELFDDILSGQYGFPSPYWDDI 605
+ Y G VW+ G++LY ++CG PF D ++I+ GQ F +
Sbjct: 184 WIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHD--------EEIIRGQVFFRQ----RV 231
Query: 606 SEEAKELISHMLESNPDLRFSAEDVLDHPWLE 637
S E + LI L P R + E++ +HPW++
Sbjct: 232 SSECQHLIRWCLALRPSDRPTFEEIQNHPWMQ 263
>pdb|3GGF|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
pdb|3GGF|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
Length = 301
Score = 104 bits (260), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 76/274 (27%), Positives = 130/274 (47%), Gaps = 16/274 (5%)
Query: 366 RENLNIPSKLLQRYSVGQIIGDGNFAVVRQVYDKHKDMDCALKIIDKSKLLGKKQMIENE 425
+ N+ P +L + + IG G+F V + D A+KIID + + + I+ E
Sbjct: 15 QNNIADPEELFTKL---ERIGKGSFGEVFKGIDNRTQQVVAIKIIDLEEAEDEIEDIQQE 71
Query: 426 VNILRSVNHPNIIKLLDEYDTNNELYLVIELIKGGDLFDAISKNVKFSEEDSKFMTQSLA 485
+ +L + + K Y ++L++++E + GG D + F E M + +
Sbjct: 72 ITVLSQCDSSYVTKYYGSYLKGSKLWIIMEYLGGGSALDLLRAG-PFDEFQIATMLKEIL 130
Query: 486 SALSYLHDNYIVHRDIKPENLLVEMSGCHVKVLKVGDFGLAQRVLRPMF---TVCGTPTY 542
L YLH +HRDIK N+L+ G +K+ DFG+A ++ T GTP +
Sbjct: 131 KGLDYLHSEKKIHRDIKAANVLLSEQGD----VKLADFGVAGQLTDTQIKRNTFVGTPFW 186
Query: 543 VAPEILNESGYGVKIDVWAAGVILYILLCGFPPFVSDTNDQDELFDDILSGQYGFPSPYW 602
+APE++ +S Y K D+W+ G+ L G PP SD + LF ++ P
Sbjct: 187 MAPEVIQQSAYDSKADIWSLGITAIELAKGEPP-NSDMHPMRVLF--LIPKNN--PPTLV 241
Query: 603 DDISEEAKELISHMLESNPDLRFSAEDVLDHPWL 636
D ++ KE I L +P R +A+++L H ++
Sbjct: 242 GDFTKSFKEFIDACLNKDPSFRPTAKELLKHKFI 275
>pdb|2QKR|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Indirubin 3'-Monoxime Bound
Length = 313
Score = 104 bits (260), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 86/307 (28%), Positives = 147/307 (47%), Gaps = 47/307 (15%)
Query: 366 RENLNIPSKLLQRYSVGQIIGDGNFAVVRQVYDKHKDMDCALKIIDKSKLLGKKQMIENE 425
RENL L+++Y + +G+G + VV + D + +I ++ G E
Sbjct: 11 RENLYF-QGLMEKYQKLEKVGEGTYGVVYKAKDSQGRIVALKRIRLDAEDEGIPSTAIRE 69
Query: 426 VNILRSVNHPNIIKLLDEYDTNNELYLVIELIKGGDLFDAISKNVKFSEEDS--KFMTQS 483
+++L+ ++HPNI+ L+D + L LV E ++ DL + +N K +DS K
Sbjct: 70 ISLLKELHHPNIVSLIDVIHSERCLTLVFEFMEK-DLKKVLDEN-KTGLQDSQIKIYLYQ 127
Query: 484 LASALSYLHDNYIVHRDIKPENLLVEMSGCHVKVLKVGDFGLAQRVLRPMFTVCG---TP 540
L +++ H + I+HRD+KP+NLL+ G LK+ DFGLA+ P+ + T
Sbjct: 128 LLRGVAHCHQHRILHRDLKPQNLLINSDGA----LKLADFGLARAFGIPVRSYTHEVVTL 183
Query: 541 TYVAPEILNES-GYGVKIDVWAAGVILYILLCGFP--PFVSDTNDQDELFDDILSGQYGF 597
Y AP++L S Y +D+W+ G I ++ G P P V+D + ++F + G
Sbjct: 184 WYRAPDVLMGSKKYSTSVDIWSIGCIFAEMITGKPLFPGVTDDDQLPKIFSIL-----GT 238
Query: 598 PSPY-WDDISE--------------------------EAKELISHMLESNPDLRFSAEDV 630
P+P W + E E +L+S+ML +P+ R SA D
Sbjct: 239 PNPREWPQVQELPLWKQRTFQVFEKKPWSSIIPGFCQEGIDLLSNMLCFDPNKRISARDA 298
Query: 631 LDHPWLE 637
++HP+ +
Sbjct: 299 MNHPYFK 305
>pdb|3NIZ|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Adp Bound
Length = 311
Score = 104 bits (259), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 86/307 (28%), Positives = 147/307 (47%), Gaps = 47/307 (15%)
Query: 366 RENLNIPSKLLQRYSVGQIIGDGNFAVVRQVYDKHKDMDCALKIIDKSKLLGKKQMIENE 425
RENL L+++Y + +G+G + VV + D + +I ++ G E
Sbjct: 11 RENLYF-QGLMEKYQKLEKVGEGTYGVVYKAKDSQGRIVALKRIRLDAEDEGIPSTAIRE 69
Query: 426 VNILRSVNHPNIIKLLDEYDTNNELYLVIELIKGGDLFDAISKNVKFSEEDS--KFMTQS 483
+++L+ ++HPNI+ L+D + L LV E ++ DL + +N K +DS K
Sbjct: 70 ISLLKELHHPNIVSLIDVIHSERCLTLVFEFMEK-DLKKVLDEN-KTGLQDSQIKIYLYQ 127
Query: 484 LASALSYLHDNYIVHRDIKPENLLVEMSGCHVKVLKVGDFGLAQRVLRPMFTVCG---TP 540
L +++ H + I+HRD+KP+NLL+ G LK+ DFGLA+ P+ + T
Sbjct: 128 LLRGVAHCHQHRILHRDLKPQNLLINSDGA----LKLADFGLARAFGIPVRSYTHEVVTL 183
Query: 541 TYVAPEILNES-GYGVKIDVWAAGVILYILLCGFP--PFVSDTNDQDELFDDILSGQYGF 597
Y AP++L S Y +D+W+ G I ++ G P P V+D + ++F + G
Sbjct: 184 WYRAPDVLMGSKKYSTSVDIWSIGCIFAEMITGKPLFPGVTDDDQLPKIFSIL-----GT 238
Query: 598 PSPY-WDDISE--------------------------EAKELISHMLESNPDLRFSAEDV 630
P+P W + E E +L+S+ML +P+ R SA D
Sbjct: 239 PNPREWPQVQELPLWKQRTFQVFEKKPWSSIIPGFCQEGIDLLSNMLCFDPNKRISARDA 298
Query: 631 LDHPWLE 637
++HP+ +
Sbjct: 299 MNHPYFK 305
>pdb|1MFW|A Chain A, Structure Of N-Terminal Doublecortin Domain From Dclk:
Selenomethionine Labeled Protein
Length = 107
Score = 104 bits (259), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 47/99 (47%), Positives = 77/99 (77%), Gaps = 2/99 (2%)
Query: 98 RRAKRIRFLCNGDKFFKGVVMAVGPERYRSFDSLLEELTRALAENINLPSGVRILFTMDG 157
++AK++RF NGD++FKG+V A+ P+R+RSF++LL +LTR L++N+NLP GVR ++T+DG
Sbjct: 7 KKAKKVRFYRNGDRYFKGIVYAISPDRFRSFEALLADLTRTLSDNVNLPQGVRTIYTIDG 66
Query: 158 -QKVTNIDELEDGKFYICSSSGDQFKKVDYAILNNNNSS 195
+K+++ D+L +G+ Y+C S + FKK++Y N N S
Sbjct: 67 LKKISSXDQLVEGESYVCGSI-EPFKKLEYTKNVNPNWS 104
>pdb|3CXW|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Beta Carboline Ligand I
pdb|3CY2|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Beta Carboline Ligand Ii
Length = 314
Score = 104 bits (259), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 75/272 (27%), Positives = 134/272 (49%), Gaps = 23/272 (8%)
Query: 375 LLQRYSVGQIIGDGNFAVVRQVYDKHKDMDCALKIIDKSKL-----LGKKQMIENEVNIL 429
L +Y VG ++G G F V ++ A+K ++K ++ L + EV +L
Sbjct: 35 LESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLL 94
Query: 430 RSVNH--PNIIKLLDEYDTNNELYLVIELIKG-GDLFDAISKNVKFSEEDSKFMTQSLAS 486
+ V+ +I+LLD ++ + L++E + DLFD I++ EE ++ +
Sbjct: 95 KKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLE 154
Query: 487 ALSYLHDNYIVHRDIKPENLLVEMSGCHVKVLKVGDFGLAQRVLRPMFTVCGTPTYVAPE 546
A+ + H+ ++HRDIK EN+L++++ +K++ G L + + F GT Y PE
Sbjct: 155 AVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTDFD--GTRVYSPPE 212
Query: 547 ILNESGY-GVKIDVWAAGVILYILLCGFPPFVSDTNDQDELFDDILSGQYGFPSPYWDDI 605
+ Y G VW+ G++LY ++CG PF D ++I+ GQ F +
Sbjct: 213 WIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHD--------EEIIGGQVFFRQ----RV 260
Query: 606 SEEAKELISHMLESNPDLRFSAEDVLDHPWLE 637
S E + LI L P R + E++ +HPW++
Sbjct: 261 SSECQHLIRWCLALRPSDRPTFEEIQNHPWMQ 292
>pdb|2BIL|B Chain B, The Human Protein Kinase Pim1 In Complex With Its
Consensus Peptide Pimtide
pdb|2BZJ|A Chain A, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru3
pdb|2BZK|B Chain B, Crystal Structure Of The Human Pim1 In Complex With Amppnp
And Pimtide
pdb|2C3I|B Chain B, Crystal Structure Of Human Pim1 In Complex With
Imidazopyridazin I
pdb|2BZH|B Chain B, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru1
pdb|2OI4|X Chain X, Crystal Structure Of Human Pim1 In Complex With
Fluorinated Ruthenium Pyridocarbazole
pdb|3BWF|A Chain A, Crystal Structure Of The Human Pim1 In Complex With An
Osmium Compound
Length = 313
Score = 103 bits (258), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 75/272 (27%), Positives = 134/272 (49%), Gaps = 23/272 (8%)
Query: 375 LLQRYSVGQIIGDGNFAVVRQVYDKHKDMDCALKIIDKSKL-----LGKKQMIENEVNIL 429
L +Y VG ++G G F V ++ A+K ++K ++ L + EV +L
Sbjct: 34 LESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLL 93
Query: 430 RSVNH--PNIIKLLDEYDTNNELYLVIELIKG-GDLFDAISKNVKFSEEDSKFMTQSLAS 486
+ V+ +I+LLD ++ + L++E + DLFD I++ EE ++ +
Sbjct: 94 KKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLE 153
Query: 487 ALSYLHDNYIVHRDIKPENLLVEMSGCHVKVLKVGDFGLAQRVLRPMFTVCGTPTYVAPE 546
A+ + H+ ++HRDIK EN+L++++ +K++ G L + + F GT Y PE
Sbjct: 154 AVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTDFD--GTRVYSPPE 211
Query: 547 ILNESGY-GVKIDVWAAGVILYILLCGFPPFVSDTNDQDELFDDILSGQYGFPSPYWDDI 605
+ Y G VW+ G++LY ++CG PF D ++I+ GQ F +
Sbjct: 212 WIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHD--------EEIIGGQVFFRQ----RV 259
Query: 606 SEEAKELISHMLESNPDLRFSAEDVLDHPWLE 637
S E + LI L P R + E++ +HPW++
Sbjct: 260 SSECQHLIRWCLALRPSDRPTFEEIQNHPWMQ 291
>pdb|2IW8|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
pdb|2IW8|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
Length = 302
Score = 103 bits (258), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 87/284 (30%), Positives = 132/284 (46%), Gaps = 37/284 (13%)
Query: 385 IGDGNFAVVRQVYDKHKDMDCALKIID-KSKLLGKKQMIENEVNILRSVNHPNIIKLLDE 443
IG+G + VV + +K ALK I ++ G E+++L+ +NHPNI+KLLD
Sbjct: 14 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDV 73
Query: 444 YDTNNELYLVIELIKGGDL--FDAISKNVKFSEEDSKFMTQSLASALSYLHDNYIVHRDI 501
T N+LYLV E + DL F S K L L++ H + ++HRD+
Sbjct: 74 IHTENKLYLVFEHVD-QDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDL 132
Query: 502 KPENLLVEMSGCHVKVLKVGDFGLAQRVLRPMFTV---CGTPTYVAPEI-LNESGYGVKI 557
KP+NLL+ G +K+ DFGLA+ P+ T T Y APEI L Y +
Sbjct: 133 KPQNLLINTEGA----IKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKYYSTAV 188
Query: 558 DVWAAGVILYILLCGFPPFVSDTNDQDELF----------DDILSGQYGFPS-----PYW 602
D+W+ G I ++ F D+ + D+LF + + G P P W
Sbjct: 189 DIWSLGCIFAEMVTRRALFPGDS-EIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFPKW 247
Query: 603 ---------DDISEEAKELISHMLESNPDLRFSAEDVLDHPWLE 637
+ E+ + L+S ML +P+ R SA+ L HP+ +
Sbjct: 248 ARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQ 291
>pdb|3JPV|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Pyrrolo[2,3- A]carbazole Ligand
pdb|3QF9|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Furan- Thiazolidinedione Ligand
pdb|4GW8|A Chain A, Human Proto-Oncogene Serine Threonine Kinase (Pim1) In
Complex With A Consensus Peptide And Leucettine L41
Length = 313
Score = 103 bits (258), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 75/272 (27%), Positives = 134/272 (49%), Gaps = 23/272 (8%)
Query: 375 LLQRYSVGQIIGDGNFAVVRQVYDKHKDMDCALKIIDKSKL-----LGKKQMIENEVNIL 429
L +Y VG ++G G F V ++ A+K ++K ++ L + EV +L
Sbjct: 35 LESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLL 94
Query: 430 RSVNH--PNIIKLLDEYDTNNELYLVIELIKG-GDLFDAISKNVKFSEEDSKFMTQSLAS 486
+ V+ +I+LLD ++ + L++E + DLFD I++ EE ++ +
Sbjct: 95 KKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLE 154
Query: 487 ALSYLHDNYIVHRDIKPENLLVEMSGCHVKVLKVGDFGLAQRVLRPMFTVCGTPTYVAPE 546
A+ + H+ ++HRDIK EN+L++++ +K++ G L + + F GT Y PE
Sbjct: 155 AVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTDFD--GTRVYSPPE 212
Query: 547 ILNESGY-GVKIDVWAAGVILYILLCGFPPFVSDTNDQDELFDDILSGQYGFPSPYWDDI 605
+ Y G VW+ G++LY ++CG PF D ++I+ GQ F +
Sbjct: 213 WIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHD--------EEIIGGQVFFRQ----RV 260
Query: 606 SEEAKELISHMLESNPDLRFSAEDVLDHPWLE 637
S E + LI L P R + E++ +HPW++
Sbjct: 261 SSECQHLIRWCLALRPSDRPTFEEIQNHPWMQ 292
>pdb|3CY3|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And
The Jnk Inhibitor V
Length = 314
Score = 103 bits (258), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 75/272 (27%), Positives = 134/272 (49%), Gaps = 23/272 (8%)
Query: 375 LLQRYSVGQIIGDGNFAVVRQVYDKHKDMDCALKIIDKSKL-----LGKKQMIENEVNIL 429
L +Y VG ++G G F V ++ A+K ++K ++ L + EV +L
Sbjct: 35 LESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLL 94
Query: 430 RSVNH--PNIIKLLDEYDTNNELYLVIELIKG-GDLFDAISKNVKFSEEDSKFMTQSLAS 486
+ V+ +I+LLD ++ + L++E + DLFD I++ EE ++ +
Sbjct: 95 KKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLE 154
Query: 487 ALSYLHDNYIVHRDIKPENLLVEMSGCHVKVLKVGDFGLAQRVLRPMFTVCGTPTYVAPE 546
A+ + H+ ++HRDIK EN+L++++ +K++ G L + + F GT Y PE
Sbjct: 155 AVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTDFD--GTRVYSPPE 212
Query: 547 ILNESGY-GVKIDVWAAGVILYILLCGFPPFVSDTNDQDELFDDILSGQYGFPSPYWDDI 605
+ Y G VW+ G++LY ++CG PF D ++I+ GQ F +
Sbjct: 213 WIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHD--------EEIIGGQVFFRQ----RV 260
Query: 606 SEEAKELISHMLESNPDLRFSAEDVLDHPWLE 637
S E + LI L P R + E++ +HPW++
Sbjct: 261 SXECQHLIRWCLALRPSDRPTFEEIQNHPWMQ 292
>pdb|2J2I|B Chain B, Crystal Structure Of The Humab Pim1 In Complex With
Ly333531
Length = 312
Score = 103 bits (258), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 75/272 (27%), Positives = 134/272 (49%), Gaps = 23/272 (8%)
Query: 375 LLQRYSVGQIIGDGNFAVVRQVYDKHKDMDCALKIIDKSKL-----LGKKQMIENEVNIL 429
L +Y VG ++G G F V ++ A+K ++K ++ L + EV +L
Sbjct: 34 LESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLL 93
Query: 430 RSVNH--PNIIKLLDEYDTNNELYLVIELIKG-GDLFDAISKNVKFSEEDSKFMTQSLAS 486
+ V+ +I+LLD ++ + L++E + DLFD I++ EE ++ +
Sbjct: 94 KKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLE 153
Query: 487 ALSYLHDNYIVHRDIKPENLLVEMSGCHVKVLKVGDFGLAQRVLRPMFTVCGTPTYVAPE 546
A+ + H+ ++HRDIK EN+L++++ +K++ G L + + F GT Y PE
Sbjct: 154 AVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTDFD--GTRVYSPPE 211
Query: 547 ILNESGY-GVKIDVWAAGVILYILLCGFPPFVSDTNDQDELFDDILSGQYGFPSPYWDDI 605
+ Y G VW+ G++LY ++CG PF D ++I+ GQ F +
Sbjct: 212 WIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHD--------EEIIGGQVFFRQ----RV 259
Query: 606 SEEAKELISHMLESNPDLRFSAEDVLDHPWLE 637
S E + LI L P R + E++ +HPW++
Sbjct: 260 SSECQHLIRWCLALRPSDRPTFEEIQNHPWMQ 291
>pdb|3A99|A Chain A, Structure Of Pim-1 Kinase Crystallized In The Presence Of
P27kip1 Carboxy-Terminal Peptide
Length = 320
Score = 103 bits (257), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 78/298 (26%), Positives = 141/298 (47%), Gaps = 23/298 (7%)
Query: 349 MPTKTSVARCATATIKRRENLNIPSKLLQRYSVGQIIGDGNFAVVRQVYDKHKDMDCALK 408
+P + +A C + L +Y VG ++G G F V ++ A+K
Sbjct: 15 VPRGSHMAPCNDLHATKLAPGKEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIK 74
Query: 409 IIDKSKL-----LGKKQMIENEVNILRSVNH--PNIIKLLDEYDTNNELYLVIELIKG-G 460
++K ++ L + EV +L+ V+ +I+LLD ++ + L++E +
Sbjct: 75 HVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQ 134
Query: 461 DLFDAISKNVKFSEEDSKFMTQSLASALSYLHDNYIVHRDIKPENLLVEMSGCHVKVLKV 520
DLFD I++ EE ++ + A+ + H+ ++HRDIK EN+L++++ +K++
Sbjct: 135 DLFDFITERGALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDF 194
Query: 521 GDFGLAQRVLRPMFTVCGTPTYVAPEILNESGY-GVKIDVWAAGVILYILLCGFPPFVSD 579
G L + + F GT Y PE + Y G VW+ G++LY ++CG PF D
Sbjct: 195 GSGALLKDTVYTDFD--GTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHD 252
Query: 580 TNDQDELFDDILSGQYGFPSPYWDDISEEAKELISHMLESNPDLRFSAEDVLDHPWLE 637
++I+ GQ F +S E + LI L P R + E++ +HPW++
Sbjct: 253 --------EEIIRGQVFFRQ----RVSSECQHLIRWCLALRPSDRPTFEEIQNHPWMQ 298
>pdb|3CKW|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24)
Length = 304
Score = 103 bits (257), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 73/264 (27%), Positives = 121/264 (45%), Gaps = 25/264 (9%)
Query: 385 IGDGNFAVVRQVYDKHKDMDCALKIIDKSKLLGKKQMIENEVNILRSVNHPNIIKLLDEY 444
IG G+F V + D A+KIID + + + I+ E+ +L + P + K Y
Sbjct: 15 IGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYYGSY 74
Query: 445 DTNNELYLVIELIKGGDLFDAISKNVKFSEEDSKFMTQSLASALSYLHDNYIVHRDIKPE 504
+ +L++++E + GG D + E + + + L YLH +HRDIK
Sbjct: 75 LKDTKLWIIMEYLGGGSALDLLEPG-PLDETQIATILREILKGLDYLHSEKKIHRDIKAA 133
Query: 505 NLLVEMSGCHVKVLKVGDFGLAQRVLRPMF---TVCGTPTYVAPEILNESGYGVKIDVWA 561
N+L+ G +K+ DFG+A ++ T GTP ++APE++ +S Y K D+W+
Sbjct: 134 NVLLSEHG----EVKLADFGVAGQLTDTQIKRNTFVGTPFWMAPEVIKQSAYDSKADIWS 189
Query: 562 AGVILYILLCGFPPFVSDTNDQDELF------DDILSGQYGFPSPYWDDISEEAKELISH 615
G+ L G PP S+ + LF L G Y P KE +
Sbjct: 190 LGITAIELARGEPPH-SELHPMKVLFLIPKNNPPTLEGNYSKP----------LKEFVEA 238
Query: 616 MLESNPDLRFSAEDVLDHPWLERS 639
L P R +A+++L H ++ R+
Sbjct: 239 CLNKEPSFRPTAKELLKHKFILRN 262
>pdb|2BIK|B Chain B, Human Pim1 Phosphorylated On Ser261
pdb|2BZI|B Chain B, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru2
Length = 313
Score = 103 bits (257), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 75/272 (27%), Positives = 134/272 (49%), Gaps = 23/272 (8%)
Query: 375 LLQRYSVGQIIGDGNFAVVRQVYDKHKDMDCALKIIDKSKL-----LGKKQMIENEVNIL 429
L +Y VG ++G G F V ++ A+K ++K ++ L + EV +L
Sbjct: 34 LESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLL 93
Query: 430 RSVNH--PNIIKLLDEYDTNNELYLVIELIKG-GDLFDAISKNVKFSEEDSKFMTQSLAS 486
+ V+ +I+LLD ++ + L++E + DLFD I++ EE ++ +
Sbjct: 94 KKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLE 153
Query: 487 ALSYLHDNYIVHRDIKPENLLVEMSGCHVKVLKVGDFGLAQRVLRPMFTVCGTPTYVAPE 546
A+ + H+ ++HRDIK EN+L++++ +K++ G L + + F GT Y PE
Sbjct: 154 AVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTDFD--GTRVYSPPE 211
Query: 547 ILNESGY-GVKIDVWAAGVILYILLCGFPPFVSDTNDQDELFDDILSGQYGFPSPYWDDI 605
+ Y G VW+ G++LY ++CG PF D ++I+ GQ F +
Sbjct: 212 WIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHD--------EEIIGGQVFFRQ----RV 259
Query: 606 SEEAKELISHMLESNPDLRFSAEDVLDHPWLE 637
S E + LI L P R + E++ +HPW++
Sbjct: 260 SXECQHLIRWCLALRPSDRPTFEEIQNHPWMQ 291
>pdb|3MA3|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Naphtho-Difuran Ligand
Length = 313
Score = 103 bits (257), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 75/272 (27%), Positives = 134/272 (49%), Gaps = 23/272 (8%)
Query: 375 LLQRYSVGQIIGDGNFAVVRQVYDKHKDMDCALKIIDKSKL-----LGKKQMIENEVNIL 429
L +Y VG ++G G F V ++ A+K ++K ++ L + EV +L
Sbjct: 35 LESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLL 94
Query: 430 RSVNH--PNIIKLLDEYDTNNELYLVIELIKG-GDLFDAISKNVKFSEEDSKFMTQSLAS 486
+ V+ +I+LLD ++ + L++E + DLFD I++ EE ++ +
Sbjct: 95 KKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLE 154
Query: 487 ALSYLHDNYIVHRDIKPENLLVEMSGCHVKVLKVGDFGLAQRVLRPMFTVCGTPTYVAPE 546
A+ + H+ ++HRDIK EN+L++++ +K++ G L + + F GT Y PE
Sbjct: 155 AVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTDFD--GTRVYSPPE 212
Query: 547 ILNESGY-GVKIDVWAAGVILYILLCGFPPFVSDTNDQDELFDDILSGQYGFPSPYWDDI 605
+ Y G VW+ G++LY ++CG PF D ++I+ GQ F +
Sbjct: 213 WIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHD--------EEIIGGQVFFRQ----RV 260
Query: 606 SEEAKELISHMLESNPDLRFSAEDVLDHPWLE 637
S E + LI L P R + E++ +HPW++
Sbjct: 261 SXECQHLIRWCLALRPSDRPTFEEIQNHPWMQ 292
>pdb|1UA2|A Chain A, Crystal Structure Of Human Cdk7
pdb|1UA2|B Chain B, Crystal Structure Of Human Cdk7
pdb|1UA2|C Chain C, Crystal Structure Of Human Cdk7
pdb|1UA2|D Chain D, Crystal Structure Of Human Cdk7
Length = 346
Score = 103 bits (257), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 78/220 (35%), Positives = 113/220 (51%), Gaps = 17/220 (7%)
Query: 377 QRYSVGQIIGDGNFAVVRQVYDKHKDMDCALKIIDKSKLLGKKQMIEN----EVNILRSV 432
+RY +G+G FA V + DK+ + A+K I K I E+ +L+ +
Sbjct: 10 KRYEKLDFLGEGQFATVYKARDKNTNQIVAIKKIKLGHRSEAKDGINRTALREIKLLQEL 69
Query: 433 NHPNIIKLLDEYDTNNELYLVIELIKGGDLFDAISKN--VKFSEEDSKFMTQSLASALSY 490
+HPNII LLD + + + LV + ++ DL I N V +M +L L Y
Sbjct: 70 SHPNIIGLLDAFGHKSNISLVFDFMET-DLEVIIKDNSLVLTPSHIKAYMLMTL-QGLEY 127
Query: 491 LHDNYIVHRDIKPENLLVEMSGCHVKVLKVGDFGLAQRVLRP---MFTVCGTPTYVAPEI 547
LH ++I+HRD+KP NLL++ +G VLK+ DFGLA+ P T Y APE+
Sbjct: 128 LHQHWILHRDLKPNNLLLDENG----VLKLADFGLAKSFGSPNRAYXHQVVTRWYRAPEL 183
Query: 548 L-NESGYGVKIDVWAAGVILYILLCGFPPFVSDTNDQDEL 586
L YGV +D+WA G IL LL PF+ +D D+L
Sbjct: 184 LFGARMYGVGVDMWAVGCILAELLLRV-PFLPGDSDLDQL 222
>pdb|1XWS|A Chain A, Crystal Structure Of The Human Pim1 Kinase Domain
Length = 313
Score = 103 bits (257), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 75/272 (27%), Positives = 134/272 (49%), Gaps = 23/272 (8%)
Query: 375 LLQRYSVGQIIGDGNFAVVRQVYDKHKDMDCALKIIDKSKL-----LGKKQMIENEVNIL 429
L +Y VG ++G G F V ++ A+K ++K ++ L + EV +L
Sbjct: 34 LESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLL 93
Query: 430 RSVNH--PNIIKLLDEYDTNNELYLVIELIKG-GDLFDAISKNVKFSEEDSKFMTQSLAS 486
+ V+ +I+LLD ++ + L++E + DLFD I++ EE ++ +
Sbjct: 94 KKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLE 153
Query: 487 ALSYLHDNYIVHRDIKPENLLVEMSGCHVKVLKVGDFGLAQRVLRPMFTVCGTPTYVAPE 546
A+ + H+ ++HRDIK EN+L++++ +K++ G L + + F GT Y PE
Sbjct: 154 AVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTDFD--GTRVYSPPE 211
Query: 547 ILNESGY-GVKIDVWAAGVILYILLCGFPPFVSDTNDQDELFDDILSGQYGFPSPYWDDI 605
+ Y G VW+ G++LY ++CG PF D ++I+ GQ F +
Sbjct: 212 WIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHD--------EEIIRGQVFFRQ----RV 259
Query: 606 SEEAKELISHMLESNPDLRFSAEDVLDHPWLE 637
S E + LI L P R + E++ +HPW++
Sbjct: 260 SSECQHLIRWCLALRPSDRPTFEEIQNHPWMQ 291
>pdb|3R00|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R01|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R02|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R04|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3VBQ|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBT|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBV|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBW|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBX|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBY|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VC4|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
Length = 299
Score = 103 bits (257), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 75/272 (27%), Positives = 134/272 (49%), Gaps = 23/272 (8%)
Query: 375 LLQRYSVGQIIGDGNFAVVRQVYDKHKDMDCALKIIDKSKL-----LGKKQMIENEVNIL 429
L +Y VG ++G G F V ++ A+K ++K ++ L + EV +L
Sbjct: 7 LESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLL 66
Query: 430 RSVNH--PNIIKLLDEYDTNNELYLVIELIKG-GDLFDAISKNVKFSEEDSKFMTQSLAS 486
+ V+ +I+LLD ++ + L++E + DLFD I++ EE ++ +
Sbjct: 67 KKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLE 126
Query: 487 ALSYLHDNYIVHRDIKPENLLVEMSGCHVKVLKVGDFGLAQRVLRPMFTVCGTPTYVAPE 546
A+ + H+ ++HRDIK EN+L++++ +K++ G L + + F GT Y PE
Sbjct: 127 AVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTDFD--GTRVYSPPE 184
Query: 547 ILNESGY-GVKIDVWAAGVILYILLCGFPPFVSDTNDQDELFDDILSGQYGFPSPYWDDI 605
+ Y G VW+ G++LY ++CG PF D ++I+ GQ F +
Sbjct: 185 WIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHD--------EEIIRGQVFFRQ----RV 232
Query: 606 SEEAKELISHMLESNPDLRFSAEDVLDHPWLE 637
S E + LI L P R + E++ +HPW++
Sbjct: 233 SSECQHLIRWCLALRPSDRPTFEEIQNHPWMQ 264
>pdb|1XQZ|A Chain A, Crystal Structure Of Hpim-1 Kinase At 2.1 A Resolution
pdb|1XR1|A Chain A, Crystal Structure Of Hpim-1 Kinase In Complex With Amp-Pnp
At 2.1 A Resolution
Length = 300
Score = 103 bits (257), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 75/272 (27%), Positives = 134/272 (49%), Gaps = 23/272 (8%)
Query: 375 LLQRYSVGQIIGDGNFAVVRQVYDKHKDMDCALKIIDKSKL-----LGKKQMIENEVNIL 429
L +Y VG ++G G F V ++ A+K ++K ++ L + EV +L
Sbjct: 21 LESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLL 80
Query: 430 RSVNH--PNIIKLLDEYDTNNELYLVIELIKG-GDLFDAISKNVKFSEEDSKFMTQSLAS 486
+ V+ +I+LLD ++ + L++E + DLFD I++ EE ++ +
Sbjct: 81 KKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLE 140
Query: 487 ALSYLHDNYIVHRDIKPENLLVEMSGCHVKVLKVGDFGLAQRVLRPMFTVCGTPTYVAPE 546
A+ + H+ ++HRDIK EN+L++++ +K++ G L + + F GT Y PE
Sbjct: 141 AVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTDFD--GTRVYSPPE 198
Query: 547 ILNESGY-GVKIDVWAAGVILYILLCGFPPFVSDTNDQDELFDDILSGQYGFPSPYWDDI 605
+ Y G VW+ G++LY ++CG PF D ++I+ GQ F +
Sbjct: 199 WIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHD--------EEIIRGQVFFRQ----RV 246
Query: 606 SEEAKELISHMLESNPDLRFSAEDVLDHPWLE 637
S E + LI L P R + E++ +HPW++
Sbjct: 247 SSECQHLIRWCLALRPSDRPTFEEIQNHPWMQ 278
>pdb|2XJ0|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-4 From
Crystallographic Fragment Screen
Length = 301
Score = 103 bits (257), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 75/272 (27%), Positives = 134/272 (49%), Gaps = 23/272 (8%)
Query: 375 LLQRYSVGQIIGDGNFAVVRQVYDKHKDMDCALKIIDKSKL-----LGKKQMIENEVNIL 429
L +Y VG ++G G F V ++ A+K ++K ++ L + EV +L
Sbjct: 22 LESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLL 81
Query: 430 RSVNH--PNIIKLLDEYDTNNELYLVIELIKG-GDLFDAISKNVKFSEEDSKFMTQSLAS 486
+ V+ +I+LLD ++ + L++E + DLFD I++ EE ++ +
Sbjct: 82 KKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLE 141
Query: 487 ALSYLHDNYIVHRDIKPENLLVEMSGCHVKVLKVGDFGLAQRVLRPMFTVCGTPTYVAPE 546
A+ + H+ ++HRDIK EN+L++++ +K++ G L + + F GT Y PE
Sbjct: 142 AVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTDFD--GTRVYSPPE 199
Query: 547 ILNESGY-GVKIDVWAAGVILYILLCGFPPFVSDTNDQDELFDDILSGQYGFPSPYWDDI 605
+ Y G VW+ G++LY ++CG PF D ++I+ GQ F +
Sbjct: 200 WIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHD--------EEIIRGQVFFRQ----RV 247
Query: 606 SEEAKELISHMLESNPDLRFSAEDVLDHPWLE 637
S E + LI L P R + E++ +HPW++
Sbjct: 248 SSECQHLIRWCLALRPSDRPTFEEIQNHPWMQ 279
>pdb|3F2A|A Chain A, Crystal Structure Of Human Pim-1 In Complex With Dappa
Length = 300
Score = 103 bits (257), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 75/272 (27%), Positives = 134/272 (49%), Gaps = 23/272 (8%)
Query: 375 LLQRYSVGQIIGDGNFAVVRQVYDKHKDMDCALKIIDKSKL-----LGKKQMIENEVNIL 429
L +Y VG ++G G F V ++ A+K ++K ++ L + EV +L
Sbjct: 21 LESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLL 80
Query: 430 RSVNH--PNIIKLLDEYDTNNELYLVIELIKG-GDLFDAISKNVKFSEEDSKFMTQSLAS 486
+ V+ +I+LLD ++ + L++E + DLFD I++ EE ++ +
Sbjct: 81 KKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLE 140
Query: 487 ALSYLHDNYIVHRDIKPENLLVEMSGCHVKVLKVGDFGLAQRVLRPMFTVCGTPTYVAPE 546
A+ + H+ ++HRDIK EN+L++++ +K++ G L + + F GT Y PE
Sbjct: 141 AVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTDFD--GTRVYSPPE 198
Query: 547 ILNESGY-GVKIDVWAAGVILYILLCGFPPFVSDTNDQDELFDDILSGQYGFPSPYWDDI 605
+ Y G VW+ G++LY ++CG PF D ++I+ GQ F +
Sbjct: 199 WIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHD--------EEIIRGQVFFRQ----RV 246
Query: 606 SEEAKELISHMLESNPDLRFSAEDVLDHPWLE 637
S E + LI L P R + E++ +HPW++
Sbjct: 247 SXECQHLIRWCLALRPSDRPTFEEIQNHPWMQ 278
>pdb|4ALV|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
pdb|4ALW|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
Length = 328
Score = 103 bits (257), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 75/272 (27%), Positives = 134/272 (49%), Gaps = 23/272 (8%)
Query: 375 LLQRYSVGQIIGDGNFAVVRQVYDKHKDMDCALKIIDKSKL-----LGKKQMIENEVNIL 429
L +Y VG ++G G F V ++ A+K ++K ++ L + EV +L
Sbjct: 49 LESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLL 108
Query: 430 RSVNH--PNIIKLLDEYDTNNELYLVIELIKG-GDLFDAISKNVKFSEEDSKFMTQSLAS 486
+ V+ +I+LLD ++ + L++E + DLFD I++ EE ++ +
Sbjct: 109 KKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLE 168
Query: 487 ALSYLHDNYIVHRDIKPENLLVEMSGCHVKVLKVGDFGLAQRVLRPMFTVCGTPTYVAPE 546
A+ + H+ ++HRDIK EN+L++++ +K++ G L + + F GT Y PE
Sbjct: 169 AVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTDFD--GTRVYSPPE 226
Query: 547 ILNESGY-GVKIDVWAAGVILYILLCGFPPFVSDTNDQDELFDDILSGQYGFPSPYWDDI 605
+ Y G VW+ G++LY ++CG PF D ++I+ GQ F +
Sbjct: 227 WIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHD--------EEIIRGQVFFRQ----RV 274
Query: 606 SEEAKELISHMLESNPDLRFSAEDVLDHPWLE 637
S E + LI L P R + E++ +HPW++
Sbjct: 275 SSECQHLIRWCLALRPSDRPTFEEIQNHPWMQ 306
>pdb|3DCV|A Chain A, Crystal Structure Of Human Pim1 Kinase Complexed With
4-(4-
Hydroxy-3-Methyl-Phenyl)-6-Phenylpyrimidin-2(1h)-One
pdb|3T9I|A Chain A, Pim1 Complexed With A Novel 3,6-Disubstituted Indole At
2.6 Ang Resolution
Length = 328
Score = 103 bits (257), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 75/272 (27%), Positives = 134/272 (49%), Gaps = 23/272 (8%)
Query: 375 LLQRYSVGQIIGDGNFAVVRQVYDKHKDMDCALKIIDKSKL-----LGKKQMIENEVNIL 429
L +Y VG ++G G F V ++ A+K ++K ++ L + EV +L
Sbjct: 49 LESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLL 108
Query: 430 RSVNH--PNIIKLLDEYDTNNELYLVIELIKG-GDLFDAISKNVKFSEEDSKFMTQSLAS 486
+ V+ +I+LLD ++ + L++E + DLFD I++ EE ++ +
Sbjct: 109 KKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLE 168
Query: 487 ALSYLHDNYIVHRDIKPENLLVEMSGCHVKVLKVGDFGLAQRVLRPMFTVCGTPTYVAPE 546
A+ + H+ ++HRDIK EN+L++++ +K++ G L + + F GT Y PE
Sbjct: 169 AVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTDFD--GTRVYSPPE 226
Query: 547 ILNESGY-GVKIDVWAAGVILYILLCGFPPFVSDTNDQDELFDDILSGQYGFPSPYWDDI 605
+ Y G VW+ G++LY ++CG PF D ++I+ GQ F +
Sbjct: 227 WIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHD--------EEIIRGQVFFRQ----RV 274
Query: 606 SEEAKELISHMLESNPDLRFSAEDVLDHPWLE 637
S E + LI L P R + E++ +HPW++
Sbjct: 275 SXECQHLIRWCLALRPSDRPTFEEIQNHPWMQ 306
>pdb|1YWV|A Chain A, Crystal Structures Of Proto-Oncogene Kinase Pim1: A Target
Of Aberrant Somatic Hypermutations In Diffuse Large Cell
Lymphoma
pdb|1YXT|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With Amppnp
pdb|1YXU|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|B Chain B, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|C Chain C, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|D Chain D, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXV|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With
3,4-Dihydroxy-1- Methylquinolin-2(1h)-One
pdb|1YXX|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With
(3e)-3-[(4- Hydroxyphenyl)imino]-1h-Indol-2(3h)-One
pdb|2O3P|A Chain A, Crystal Structure Of Pim1 With Quercetin
pdb|2O63|A Chain A, Crystal Structure Of Pim1 With Myricetin
pdb|2O64|A Chain A, Crystal Structure Of Pim1 With Quercetagetin
pdb|2O65|A Chain A, Crystal Structure Of Pim1 With Pentahydroxyflavone
Length = 293
Score = 103 bits (256), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 75/272 (27%), Positives = 134/272 (49%), Gaps = 23/272 (8%)
Query: 375 LLQRYSVGQIIGDGNFAVVRQVYDKHKDMDCALKIIDKSKL-----LGKKQMIENEVNIL 429
L +Y VG ++G G F V ++ A+K ++K ++ L + EV +L
Sbjct: 6 LESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLL 65
Query: 430 RSVNH--PNIIKLLDEYDTNNELYLVIELIKG-GDLFDAISKNVKFSEEDSKFMTQSLAS 486
+ V+ +I+LLD ++ + L++E + DLFD I++ EE ++ +
Sbjct: 66 KKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLE 125
Query: 487 ALSYLHDNYIVHRDIKPENLLVEMSGCHVKVLKVGDFGLAQRVLRPMFTVCGTPTYVAPE 546
A+ + H+ ++HRDIK EN+L++++ +K++ G L + + F GT Y PE
Sbjct: 126 AVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTDFD--GTRVYSPPE 183
Query: 547 ILNESGY-GVKIDVWAAGVILYILLCGFPPFVSDTNDQDELFDDILSGQYGFPSPYWDDI 605
+ Y G VW+ G++LY ++CG PF D ++I+ GQ F +
Sbjct: 184 WIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHD--------EEIIRGQVFFRQ----RV 231
Query: 606 SEEAKELISHMLESNPDLRFSAEDVLDHPWLE 637
S E + LI L P R + E++ +HPW++
Sbjct: 232 SSECQHLIRWCLALRPSDRPTFEEIQNHPWMQ 263
>pdb|2OBJ|A Chain A, Crystal Structure Of Human Pim-1 Kinase In Complex With
Inhibitor
pdb|3BGP|A Chain A, Human Pim-1 Complexed With A Benzoisoxazole Inhibitor Vx1
pdb|3BGQ|A Chain A, Human Pim-1 Kinase In Complex With An Triazolo Pyridazine
Inhibitor Vx2
pdb|3BGZ|A Chain A, Human Pim-1 Kinase In Complex With Diphenyl Indole
Inhibitor Vx3
Length = 333
Score = 103 bits (256), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 75/272 (27%), Positives = 134/272 (49%), Gaps = 23/272 (8%)
Query: 375 LLQRYSVGQIIGDGNFAVVRQVYDKHKDMDCALKIIDKSKL-----LGKKQMIENEVNIL 429
L +Y VG ++G G F V ++ A+K ++K ++ L + EV +L
Sbjct: 54 LESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLL 113
Query: 430 RSVNH--PNIIKLLDEYDTNNELYLVIELIKG-GDLFDAISKNVKFSEEDSKFMTQSLAS 486
+ V+ +I+LLD ++ + L++E + DLFD I++ EE ++ +
Sbjct: 114 KKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLE 173
Query: 487 ALSYLHDNYIVHRDIKPENLLVEMSGCHVKVLKVGDFGLAQRVLRPMFTVCGTPTYVAPE 546
A+ + H+ ++HRDIK EN+L++++ +K++ G L + + F GT Y PE
Sbjct: 174 AVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTDFD--GTRVYSPPE 231
Query: 547 ILNESGY-GVKIDVWAAGVILYILLCGFPPFVSDTNDQDELFDDILSGQYGFPSPYWDDI 605
+ Y G VW+ G++LY ++CG PF D ++I+ GQ F +
Sbjct: 232 WIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHD--------EEIIRGQVFFRQ----RV 279
Query: 606 SEEAKELISHMLESNPDLRFSAEDVLDHPWLE 637
S E + LI L P R + E++ +HPW++
Sbjct: 280 SXECQHLIRWCLALRPSDRPTFEEIQNHPWMQ 311
>pdb|3UIX|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Small
Molecule Inhibitor
pdb|3UMX|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Inhibitor
(Z)-2-[(1h-
Indol-3-Yl)methylene]-7-(Azepan-1-Ylmethyl)-6-
Hydroxybenzofuran- 3(2h)-One
pdb|4ENX|A Chain A, Crystal Structure Of Pim-1 Kinase In Complex With
Inhibitor (2e,5z)-2-
(2-Chlorophenylimino)-5-(4-Hydroxy-3-
Nitrobenzylidene)thiazolidin-4- One
pdb|4ENY|A Chain A, Crystal Structure Of Pim-1 Kinase In Complex With
(2e,5z)-2-(2-
Chlorophenylimino)-5-(4-Hydroxy-3-
Methoxybenzylidene)thiazolidin-4- One
pdb|3UMW|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Inhibitor
(Z)-2-[(1h-
Indazol-3-Yl)methylene]-6-Methoxy-7-(Piperazin-1-
Ylmethyl)benzofuran- 3(2h)-One
Length = 298
Score = 103 bits (256), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 75/272 (27%), Positives = 134/272 (49%), Gaps = 23/272 (8%)
Query: 375 LLQRYSVGQIIGDGNFAVVRQVYDKHKDMDCALKIIDKSKL-----LGKKQMIENEVNIL 429
L +Y VG ++G G F V ++ A+K ++K ++ L + EV +L
Sbjct: 7 LESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLL 66
Query: 430 RSVNH--PNIIKLLDEYDTNNELYLVIELIKG-GDLFDAISKNVKFSEEDSKFMTQSLAS 486
+ V+ +I+LLD ++ + L++E + DLFD I++ EE ++ +
Sbjct: 67 KKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLE 126
Query: 487 ALSYLHDNYIVHRDIKPENLLVEMSGCHVKVLKVGDFGLAQRVLRPMFTVCGTPTYVAPE 546
A+ + H+ ++HRDIK EN+L++++ +K++ G L + + F GT Y PE
Sbjct: 127 AVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTDFD--GTRVYSPPE 184
Query: 547 ILNESGY-GVKIDVWAAGVILYILLCGFPPFVSDTNDQDELFDDILSGQYGFPSPYWDDI 605
+ Y G VW+ G++LY ++CG PF D ++I+ GQ F +
Sbjct: 185 WIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHD--------EEIIRGQVFFRQ----RV 232
Query: 606 SEEAKELISHMLESNPDLRFSAEDVLDHPWLE 637
S E + LI L P R + E++ +HPW++
Sbjct: 233 SSECQHLIRWCLALRPSDRPTFEEIQNHPWMQ 264
>pdb|1YHS|A Chain A, Crystal Structure Of Pim-1 Bound To Staurosporine
pdb|1YI3|A Chain A, Crystal Structure Of Pim-1 Bound To Ly294002
pdb|1YI4|A Chain A, Structure Of Pim-1 Bound To Adenosine
Length = 273
Score = 103 bits (256), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 75/272 (27%), Positives = 134/272 (49%), Gaps = 23/272 (8%)
Query: 375 LLQRYSVGQIIGDGNFAVVRQVYDKHKDMDCALKIIDKSKL-----LGKKQMIENEVNIL 429
L +Y VG ++G G F V ++ A+K ++K ++ L + EV +L
Sbjct: 2 LESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLL 61
Query: 430 RSVN--HPNIIKLLDEYDTNNELYLVIELIKG-GDLFDAISKNVKFSEEDSKFMTQSLAS 486
+ V+ +I+LLD ++ + L++E + DLFD I++ EE ++ +
Sbjct: 62 KKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLE 121
Query: 487 ALSYLHDNYIVHRDIKPENLLVEMSGCHVKVLKVGDFGLAQRVLRPMFTVCGTPTYVAPE 546
A+ + H+ ++HRDIK EN+L++++ +K++ G L + + F GT Y PE
Sbjct: 122 AVRHCHNXGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTDFD--GTRVYSPPE 179
Query: 547 ILNESGY-GVKIDVWAAGVILYILLCGFPPFVSDTNDQDELFDDILSGQYGFPSPYWDDI 605
+ Y G VW+ G++LY ++CG PF D ++I+ GQ F +
Sbjct: 180 WIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHD--------EEIIRGQVFFRQ----RV 227
Query: 606 SEEAKELISHMLESNPDLRFSAEDVLDHPWLE 637
S E + LI L P R + E++ +HPW++
Sbjct: 228 SXECQHLIRWCLALRPSDRPTFEEIQNHPWMQ 259
>pdb|3JXW|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
pdb|3JY0|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
pdb|3JYA|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
Length = 294
Score = 103 bits (256), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 75/272 (27%), Positives = 134/272 (49%), Gaps = 23/272 (8%)
Query: 375 LLQRYSVGQIIGDGNFAVVRQVYDKHKDMDCALKIIDKSKL-----LGKKQMIENEVNIL 429
L +Y VG ++G G F V ++ A+K ++K ++ L + EV +L
Sbjct: 7 LESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLL 66
Query: 430 RSVNH--PNIIKLLDEYDTNNELYLVIELIKG-GDLFDAISKNVKFSEEDSKFMTQSLAS 486
+ V+ +I+LLD ++ + L++E + DLFD I++ EE ++ +
Sbjct: 67 KKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLE 126
Query: 487 ALSYLHDNYIVHRDIKPENLLVEMSGCHVKVLKVGDFGLAQRVLRPMFTVCGTPTYVAPE 546
A+ + H+ ++HRDIK EN+L++++ +K++ G L + + F GT Y PE
Sbjct: 127 AVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTDFD--GTRVYSPPE 184
Query: 547 ILNESGY-GVKIDVWAAGVILYILLCGFPPFVSDTNDQDELFDDILSGQYGFPSPYWDDI 605
+ Y G VW+ G++LY ++CG PF D ++I+ GQ F +
Sbjct: 185 WIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHD--------EEIIRGQVFFRQ----RV 232
Query: 606 SEEAKELISHMLESNPDLRFSAEDVLDHPWLE 637
S E + LI L P R + E++ +HPW++
Sbjct: 233 SSECQHLIRWCLALRPSDRPTFEEIQNHPWMQ 264
>pdb|3ZHP|C Chain C, Human Mst3 (stk24) In Complex With Mo25beta
pdb|3ZHP|D Chain D, Human Mst3 (stk24) In Complex With Mo25beta
Length = 294
Score = 103 bits (256), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 73/264 (27%), Positives = 121/264 (45%), Gaps = 25/264 (9%)
Query: 385 IGDGNFAVVRQVYDKHKDMDCALKIIDKSKLLGKKQMIENEVNILRSVNHPNIIKLLDEY 444
IG G+F V + D A+KIID + + + I+ E+ +L + P + K Y
Sbjct: 35 IGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYYGSY 94
Query: 445 DTNNELYLVIELIKGGDLFDAISKNVKFSEEDSKFMTQSLASALSYLHDNYIVHRDIKPE 504
+ +L++++E + GG D + E + + + L YLH +HRDIK
Sbjct: 95 LKDTKLWIIMEYLGGGSALDLLEPG-PLDETQIATILREILKGLDYLHSEKKIHRDIKAA 153
Query: 505 NLLVEMSGCHVKVLKVGDFGLAQRVLRPMF---TVCGTPTYVAPEILNESGYGVKIDVWA 561
N+L+ G +K+ DFG+A ++ T GTP ++APE++ +S Y K D+W+
Sbjct: 154 NVLLSEHG----EVKLADFGVAGQLTDTQIKRNTFVGTPFWMAPEVIKQSAYDSKADIWS 209
Query: 562 AGVILYILLCGFPPFVSDTNDQDELF------DDILSGQYGFPSPYWDDISEEAKELISH 615
G+ L G PP S+ + LF L G Y P KE +
Sbjct: 210 LGITAIELARGEPPH-SELHPMKVLFLIPKNNPPTLEGNYSKP----------LKEFVEA 258
Query: 616 MLESNPDLRFSAEDVLDHPWLERS 639
L P R +A+++L H ++ R+
Sbjct: 259 CLNKEPSFRPTAKELLKHKFILRN 282
>pdb|4DTK|A Chain A, Novel And Selective Pan-Pim Kinase Inhibitor
Length = 276
Score = 103 bits (256), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 75/272 (27%), Positives = 134/272 (49%), Gaps = 23/272 (8%)
Query: 375 LLQRYSVGQIIGDGNFAVVRQVYDKHKDMDCALKIIDKSKL-----LGKKQMIENEVNIL 429
L +Y VG ++G G F V ++ A+K ++K ++ L + EV +L
Sbjct: 5 LESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLL 64
Query: 430 RSVN--HPNIIKLLDEYDTNNELYLVIELIKG-GDLFDAISKNVKFSEEDSKFMTQSLAS 486
+ V+ +I+LLD ++ + L++E + DLFD I++ EE ++ +
Sbjct: 65 KKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLE 124
Query: 487 ALSYLHDNYIVHRDIKPENLLVEMSGCHVKVLKVGDFGLAQRVLRPMFTVCGTPTYVAPE 546
A+ + H+ ++HRDIK EN+L++++ +K++ G L + + F GT Y PE
Sbjct: 125 AVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTDFD--GTRVYSPPE 182
Query: 547 ILNESGY-GVKIDVWAAGVILYILLCGFPPFVSDTNDQDELFDDILSGQYGFPSPYWDDI 605
+ Y G VW+ G++LY ++CG PF D ++I+ GQ F +
Sbjct: 183 WIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHD--------EEIIRGQVFFRQ----RV 230
Query: 606 SEEAKELISHMLESNPDLRFSAEDVLDHPWLE 637
S E + LI L P R + E++ +HPW++
Sbjct: 231 SSECQHLIRWCLALRPSDRPTFEEIQNHPWMQ 262
>pdb|4AS0|A Chain A, Cyclometalated Phthalimides As Protein Kinase Inhibitors
Length = 273
Score = 103 bits (256), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 75/272 (27%), Positives = 134/272 (49%), Gaps = 23/272 (8%)
Query: 375 LLQRYSVGQIIGDGNFAVVRQVYDKHKDMDCALKIIDKSKL-----LGKKQMIENEVNIL 429
L +Y VG ++G G F V ++ A+K ++K ++ L + EV +L
Sbjct: 2 LESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLL 61
Query: 430 RSVN--HPNIIKLLDEYDTNNELYLVIELIKG-GDLFDAISKNVKFSEEDSKFMTQSLAS 486
+ V+ +I+LLD ++ + L++E + DLFD I++ EE ++ +
Sbjct: 62 KKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLE 121
Query: 487 ALSYLHDNYIVHRDIKPENLLVEMSGCHVKVLKVGDFGLAQRVLRPMFTVCGTPTYVAPE 546
A+ + H+ ++HRDIK EN+L++++ +K++ G L + + F GT Y PE
Sbjct: 122 AVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTDFD--GTRVYSPPE 179
Query: 547 ILNESGY-GVKIDVWAAGVILYILLCGFPPFVSDTNDQDELFDDILSGQYGFPSPYWDDI 605
+ Y G VW+ G++LY ++CG PF D ++I+ GQ F +
Sbjct: 180 WIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHD--------EEIIGGQVFFRQ----RV 227
Query: 606 SEEAKELISHMLESNPDLRFSAEDVLDHPWLE 637
S E + LI L P R + E++ +HPW++
Sbjct: 228 SSECQHLIRWCLALRPSDRPTFEEIQNHPWMQ 259
>pdb|2XIY|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-2 From
Crystallographic Fragment Screen
pdb|2XIZ|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-3 From
Crystallographic Fragment Screen
pdb|2XJ1|A Chain A, Protein Kinase Pim-1 In Complex With Small Molecule
Inibitor
pdb|2XJ2|A Chain A, Protein Kinase Pim-1 In Complex With Small Molecule
Inhibitor
Length = 301
Score = 103 bits (256), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 75/272 (27%), Positives = 134/272 (49%), Gaps = 23/272 (8%)
Query: 375 LLQRYSVGQIIGDGNFAVVRQVYDKHKDMDCALKIIDKSKL-----LGKKQMIENEVNIL 429
L +Y VG ++G G F V ++ A+K ++K ++ L + EV +L
Sbjct: 22 LESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLL 81
Query: 430 RSVNH--PNIIKLLDEYDTNNELYLVIELIKG-GDLFDAISKNVKFSEEDSKFMTQSLAS 486
+ V+ +I+LLD ++ + L++E + DLFD I++ EE ++ +
Sbjct: 82 KKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLE 141
Query: 487 ALSYLHDNYIVHRDIKPENLLVEMSGCHVKVLKVGDFGLAQRVLRPMFTVCGTPTYVAPE 546
A+ + H+ ++HRDIK EN+L++++ +K++ G L + + F GT Y PE
Sbjct: 142 AVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTDFD--GTRVYSPPE 199
Query: 547 ILNESGY-GVKIDVWAAGVILYILLCGFPPFVSDTNDQDELFDDILSGQYGFPSPYWDDI 605
+ Y G VW+ G++LY ++CG PF D ++I+ GQ F +
Sbjct: 200 WIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHD--------EEIIRGQVFFRQ----RV 247
Query: 606 SEEAKELISHMLESNPDLRFSAEDVLDHPWLE 637
S E + LI L P R + E++ +HPW++
Sbjct: 248 SXECQHLIRWCLALRPSDRPTFEEIQNHPWMQ 279
>pdb|2XIX|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-1 From
Crystallographic Fragment Screen
Length = 301
Score = 103 bits (256), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 75/272 (27%), Positives = 134/272 (49%), Gaps = 23/272 (8%)
Query: 375 LLQRYSVGQIIGDGNFAVVRQVYDKHKDMDCALKIIDKSKL-----LGKKQMIENEVNIL 429
L +Y VG ++G G F V ++ A+K ++K ++ L + EV +L
Sbjct: 22 LESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLL 81
Query: 430 RSVNH--PNIIKLLDEYDTNNELYLVIELIKG-GDLFDAISKNVKFSEEDSKFMTQSLAS 486
+ V+ +I+LLD ++ + L++E + DLFD I++ EE ++ +
Sbjct: 82 KKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLE 141
Query: 487 ALSYLHDNYIVHRDIKPENLLVEMSGCHVKVLKVGDFGLAQRVLRPMFTVCGTPTYVAPE 546
A+ + H+ ++HRDIK EN+L++++ +K++ G L + + F GT Y PE
Sbjct: 142 AVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTDFD--GTRVYSPPE 199
Query: 547 ILNESGY-GVKIDVWAAGVILYILLCGFPPFVSDTNDQDELFDDILSGQYGFPSPYWDDI 605
+ Y G VW+ G++LY ++CG PF D ++I+ GQ F +
Sbjct: 200 WIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHD--------EEIIRGQVFFRQ----RV 247
Query: 606 SEEAKELISHMLESNPDLRFSAEDVLDHPWLE 637
S E + LI L P R + E++ +HPW++
Sbjct: 248 SXECQHLIRWCLALRPXDRPTFEEIQNHPWMQ 279
>pdb|3C4E|A Chain A, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|B Chain B, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|C Chain C, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|D Chain D, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
Length = 273
Score = 102 bits (255), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 75/272 (27%), Positives = 134/272 (49%), Gaps = 23/272 (8%)
Query: 375 LLQRYSVGQIIGDGNFAVVRQVYDKHKDMDCALKIIDKSKL-----LGKKQMIENEVNIL 429
L +Y VG ++G G F V ++ A+K ++K ++ L + EV +L
Sbjct: 2 LESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLL 61
Query: 430 RSVN--HPNIIKLLDEYDTNNELYLVIELIKG-GDLFDAISKNVKFSEEDSKFMTQSLAS 486
+ V+ +I+LLD ++ + L++E + DLFD I++ EE ++ +
Sbjct: 62 KKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLE 121
Query: 487 ALSYLHDNYIVHRDIKPENLLVEMSGCHVKVLKVGDFGLAQRVLRPMFTVCGTPTYVAPE 546
A+ + H+ ++HRDIK EN+L++++ +K++ G L + + F GT Y PE
Sbjct: 122 AVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTDFD--GTRVYSPPE 179
Query: 547 ILNESGY-GVKIDVWAAGVILYILLCGFPPFVSDTNDQDELFDDILSGQYGFPSPYWDDI 605
+ Y G VW+ G++LY ++CG PF D ++I+ GQ F +
Sbjct: 180 WIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHD--------EEIIRGQVFFRQ----RV 227
Query: 606 SEEAKELISHMLESNPDLRFSAEDVLDHPWLE 637
S E + LI L P R + E++ +HPW++
Sbjct: 228 SSECQHLIRWCLALRPSDRPTFEEIQNHPWMQ 259
>pdb|3F61|A Chain A, Crystal Structure Of M. Tuberculosis Pknb
Leu33aspVAL222ASP DOUBLE MUTANT IN COMPLEX WITH ADP
Length = 311
Score = 102 bits (255), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 72/277 (25%), Positives = 128/277 (46%), Gaps = 32/277 (11%)
Query: 368 NLNIPSKLLQRYSVGQIIGDGNFAVVRQVYDKHKDMDCALKII------DKSKLLGKKQM 421
++ PS L RY +G+I+G G + V D D A+K++ D S L ++
Sbjct: 3 HMTTPSHLSDRYELGEILGFGGMSEVHLARDLRDHRDVAVKVLRADLARDPSFYLRFRRE 62
Query: 422 IENEVNILRSVNHPNIIKLLDEYDTNNEL----YLVIELIKGGDLFDAISKNVKFSEEDS 477
+N ++NHP I+ + D + Y+V+E + G L D + + + +
Sbjct: 63 AQNAA----ALNHPAIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGPMTPKRA 118
Query: 478 KFMTQSLASALSYLHDNYIVHRDIKPENLLVEMSGCHVKVLKVGDFGLAQRV------LR 531
+ AL++ H N I+HRD+KP N+++ + +KV DFG+A+ + +
Sbjct: 119 IEVIADACQALNFSHQNGIIHRDVKPANIMISAT----NAVKVMDFGIARAIADSGNSVT 174
Query: 532 PMFTVCGTPTYVAPEILNESGYGVKIDVWAAGVILYILLCGFPPFVSDTNDQ---DELFD 588
V GT Y++PE + DV++ G +LY +L G PPF D+ D + +
Sbjct: 175 QTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPFTGDSPDSVAYQHVRE 234
Query: 589 DILSGQYGFPSPYWDDISEEAKELISHMLESNPDLRF 625
D + PS + +S + ++ L NP+ R+
Sbjct: 235 DPIP-----PSARHEGLSADLDAVVLKALAKNPENRY 266
>pdb|4A7C|A Chain A, Crystal Structure Of Pim1 Kinase With Etp46546
Length = 308
Score = 102 bits (255), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 75/272 (27%), Positives = 134/272 (49%), Gaps = 23/272 (8%)
Query: 375 LLQRYSVGQIIGDGNFAVVRQVYDKHKDMDCALKIIDKSKL-----LGKKQMIENEVNIL 429
L +Y VG ++G G F V ++ A+K ++K ++ L + EV +L
Sbjct: 29 LESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLL 88
Query: 430 RSVN--HPNIIKLLDEYDTNNELYLVIELIKG-GDLFDAISKNVKFSEEDSKFMTQSLAS 486
+ V+ +I+LLD ++ + L++E + DLFD I++ EE ++ +
Sbjct: 89 KKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLE 148
Query: 487 ALSYLHDNYIVHRDIKPENLLVEMSGCHVKVLKVGDFGLAQRVLRPMFTVCGTPTYVAPE 546
A+ + H+ ++HRDIK EN+L++++ +K++ G L + + F GT Y PE
Sbjct: 149 AVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTDFD--GTRVYSPPE 206
Query: 547 ILNESGY-GVKIDVWAAGVILYILLCGFPPFVSDTNDQDELFDDILSGQYGFPSPYWDDI 605
+ Y G VW+ G++LY ++CG PF D ++I+ GQ F +
Sbjct: 207 WIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHD--------EEIIRGQVFFRQ----RV 254
Query: 606 SEEAKELISHMLESNPDLRFSAEDVLDHPWLE 637
S E + LI L P R + E++ +HPW++
Sbjct: 255 SXECQHLIRWCLALRPSDRPTFEEIQNHPWMQ 286
>pdb|2J7T|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Su11274
pdb|4AOT|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4AOT|B Chain B, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4EQU|A Chain A, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
pdb|4EQU|B Chain B, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
Length = 302
Score = 101 bits (252), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 76/269 (28%), Positives = 139/269 (51%), Gaps = 26/269 (9%)
Query: 381 VGQIIGDGNFAVVRQVYDKHKDMDCALKIIDKSKLLGKKQMIEN---EVNILRSVNHPNI 437
VG++ GDG F V + +K A K+I+ ++ +E+ E+ IL + +HP I
Sbjct: 24 VGEL-GDGAFGKVYKAKNKETGALAAAKVIETKS----EEELEDYIVEIEILATCDHPYI 78
Query: 438 IKLLDEYDTNNELYLVIELIKGGDLFDAISKNV--KFSEEDSKFMTQSLASALSYLHDNY 495
+KLL Y + +L+++IE GG + DAI + +E + + + + AL++LH
Sbjct: 79 VKLLGAYYHDGKLWIMIEFCPGGAV-DAIMLELDRGLTEPQIQVVCRQMLEALNFLHSKR 137
Query: 496 IVHRDIKPENLLVEMSGCHVKVLKVGDFGLAQRVLRPMF---TVCGTPTYVAPEI----- 547
I+HRD+K N+L+ + G +++ DFG++ + L+ + + GTP ++APE+
Sbjct: 138 IIHRDLKAGNVLMTLEGD----IRLADFGVSAKNLKTLQKRDSFIGTPYWMAPEVVMCET 193
Query: 548 LNESGYGVKIDVWAAGVILYILLCGFPPFVSDTNDQDELFDDILSGQYGFPSPYWDDISE 607
+ ++ Y K D+W+ G+ L I + P + N L S +P S
Sbjct: 194 MKDTPYDYKADIWSLGITL-IEMAQIEPPHHELNPMRVLLKIAKSDPPTLLTP--SKWSV 250
Query: 608 EAKELISHMLESNPDLRFSAEDVLDHPWL 636
E ++ + L+ NP+ R SA +L+HP++
Sbjct: 251 EFRDFLKIALDKNPETRPSAAQLLEHPFV 279
>pdb|3A7F|A Chain A, Human Mst3 Kinase
pdb|3A7G|A Chain A, Human Mst3 Kinase
pdb|3A7G|B Chain B, Human Mst3 Kinase
pdb|3A7H|A Chain A, Human Mst3 Kinase In Complex With Atp
pdb|3A7H|B Chain B, Human Mst3 Kinase In Complex With Atp
pdb|3A7I|A Chain A, Human Mst3 Kinase In Complex With Adenine
pdb|3A7J|A Chain A, Human Mst3 Kinase In Complex With Mnadp
Length = 303
Score = 101 bits (252), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 74/266 (27%), Positives = 122/266 (45%), Gaps = 29/266 (10%)
Query: 385 IGDGNFAVVRQVYDKHKDMDCALKIIDKSKLLGKKQMIENEVNILRSVNHPNIIKLLDEY 444
IG G+F V + D A+KIID + + + I+ E+ +L + P + K Y
Sbjct: 30 IGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYYGSY 89
Query: 445 DTNNELYLVIELIKGGDLFDAISKNVKFSEEDSKFMTQSLASALSYLHDNYIVHRDIKPE 504
+ +L++++E + GG D + E + + + L YLH +HRDIK
Sbjct: 90 LKDTKLWIIMEYLGGGSALDLLEPG-PLDETQIATILREILKGLDYLHSEKKIHRDIKAA 148
Query: 505 NLLVEMSGCHVKVLKVGDFGLA-----QRVLRPMFTVCGTPTYVAPEILNESGYGVKIDV 559
N+L+ G +K+ DFG+A ++ R F GTP ++APE++ +S Y K D+
Sbjct: 149 NVLLSEHG----EVKLADFGVAGQLTDTQIKRNXF--VGTPFWMAPEVIKQSAYDSKADI 202
Query: 560 WAAGVILYILLCGFPPFVSDTNDQDELF------DDILSGQYGFPSPYWDDISEEAKELI 613
W+ G+ L G PP S+ + LF L G Y P KE +
Sbjct: 203 WSLGITAIELARGEPPH-SELHPMKVLFLIPKNNPPTLEGNYSKP----------LKEFV 251
Query: 614 SHMLESNPDLRFSAEDVLDHPWLERS 639
L P R +A+++L H ++ R+
Sbjct: 252 EACLNKEPSFRPTAKELLKHKFILRN 277
>pdb|3CKX|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24) In Complex With Staurosporine
Length = 304
Score = 101 bits (252), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 74/266 (27%), Positives = 122/266 (45%), Gaps = 29/266 (10%)
Query: 385 IGDGNFAVVRQVYDKHKDMDCALKIIDKSKLLGKKQMIENEVNILRSVNHPNIIKLLDEY 444
IG G+F V + D A+KIID + + + I+ E+ +L + P + K Y
Sbjct: 15 IGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYYGSY 74
Query: 445 DTNNELYLVIELIKGGDLFDAISKNVKFSEEDSKFMTQSLASALSYLHDNYIVHRDIKPE 504
+ +L++++E + GG D + E + + + L YLH +HRDIK
Sbjct: 75 LKDTKLWIIMEYLGGGSALDLLEPG-PLDETQIATILREILKGLDYLHSEKKIHRDIKAA 133
Query: 505 NLLVEMSGCHVKVLKVGDFGLA-----QRVLRPMFTVCGTPTYVAPEILNESGYGVKIDV 559
N+L+ G +K+ DFG+A ++ R F GTP ++APE++ +S Y K D+
Sbjct: 134 NVLLSEHG----EVKLADFGVAGQLTDTQIKRNXF--VGTPFWMAPEVIKQSAYDSKADI 187
Query: 560 WAAGVILYILLCGFPPFVSDTNDQDELF------DDILSGQYGFPSPYWDDISEEAKELI 613
W+ G+ L G PP S+ + LF L G Y P KE +
Sbjct: 188 WSLGITAIELARGEPPH-SELHPMKVLFLIPKNNPPTLEGNYSKP----------LKEFV 236
Query: 614 SHMLESNPDLRFSAEDVLDHPWLERS 639
L P R +A+++L H ++ R+
Sbjct: 237 EACLNKEPSFRPTAKELLKHKFILRN 262
>pdb|3NYN|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYN|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYO|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
pdb|3NYO|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
Length = 576
Score = 101 bits (252), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 81/272 (29%), Positives = 123/272 (45%), Gaps = 27/272 (9%)
Query: 383 QIIGDGNFAVVR--QVYDKHKDMDCALKIIDKSKLLGKKQMIENEVNILRSVNHPNIIKL 440
+++G G F V QV K C + K + M NE IL VN ++ L
Sbjct: 190 RVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKQILEKVNSRFVVSL 249
Query: 441 LDEYDTNNELYLVIELIKGGDLFDAISK--NVKFSEEDSKFMTQSLASALSYLHDNYIVH 498
Y+T + L LV+ L+ GGDL I F E + F + L LH IV+
Sbjct: 250 AYAYETKDALCLVLTLMNGGDLKFHIYHMGQAGFPEARAVFYAAEICCGLEDLHRERIVY 309
Query: 499 RDIKPENLLVEMSGCHVKVLKVGDFGLAQRVL--RPMFTVCGTPTYVAPEILNESGYGVK 556
RD+KPEN+L++ G H+++ D GLA V + + GT Y+APE++ Y
Sbjct: 310 RDLKPENILLDDHG-HIRI---SDLGLAVHVPEGQTIKGRVGTVGYMAPEVVKNERYTFS 365
Query: 557 IDVWAAGVILYILLCGFPPFVS-----DTNDQDELFDDILSGQYGFPSPYWDDISEEAKE 611
D WA G +LY ++ G PF + + L ++ P Y + S +A+
Sbjct: 366 PDWWALGCLLYEMIAGQSPFQQRKKKIKREEVERLVKEV-------PEEYSERFSPQARS 418
Query: 612 LISHMLESNPDLRF-----SAEDVLDHPWLER 638
L S +L +P R SA +V +HP ++
Sbjct: 419 LCSQLLCKDPAERLGCRGGSAREVKEHPLFKK 450
>pdb|3K2L|A Chain A, Crystal Structure Of Dual-Specificity Tyrosine
Phosphorylation Regulated Kinase 2 (Dyrk2)
Length = 429
Score = 101 bits (252), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 76/246 (30%), Positives = 119/246 (48%), Gaps = 18/246 (7%)
Query: 378 RYSVGQIIGDGNFAVVRQVYDKHKDMDCALKIIDKSKLLGKKQMIENEVNILRSV----- 432
RY V ++IG G F V + YD ALK++ K ++ E+ IL +
Sbjct: 98 RYEVLKVIGKGXFGQVVKAYDHKVHQHVALKMVRNEKRFHRQ--AAEEIRILEHLRKQDK 155
Query: 433 -NHPNIIKLLDEYDTNNELYLVIELIKGGDLFDAISKN--VKFSEEDSKFMTQSLASALS 489
N N+I +L+ + N + + EL+ +L++ I KN FS + S+ L
Sbjct: 156 DNTMNVIHMLENFTFRNHICMTFELLSM-NLYELIKKNKFQGFSLPLVRKFAHSILQCLD 214
Query: 490 YLHDNYIVHRDIKPENLLVEMSGCHVKVLKVGDFGLAQRVLRPMFTVCGTPTYVAPEILN 549
LH N I+H D+KPEN+L++ G +KV DFG + + ++ + Y APE++
Sbjct: 215 ALHKNRIIHCDLKPENILLKQQG--RSGIKVIDFGSSCYEHQRVYXXIQSRFYRAPEVIL 272
Query: 550 ESGYGVKIDVWAAGVILYILLCGFPPFVS-DTNDQDELFDDILSGQYGFPSPYWDDISEE 608
+ YG+ ID+W+ G IL LL G+P D DQ ++L G P D S+
Sbjct: 273 GARYGMPIDMWSLGCILAELLTGYPLLPGEDEGDQLACMIELL----GMPXQKLLDASKR 328
Query: 609 AKELIS 614
AK +S
Sbjct: 329 AKNFVS 334
>pdb|4BC6|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Novel Bosutinib Isoform 1, Previously Thought
To Be Bosutinib
Length = 293
Score = 101 bits (252), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 76/269 (28%), Positives = 139/269 (51%), Gaps = 26/269 (9%)
Query: 381 VGQIIGDGNFAVVRQVYDKHKDMDCALKIIDKSKLLGKKQMIEN---EVNILRSVNHPNI 437
VG++ GDG F V + +K A K+I+ ++ +E+ E+ IL + +HP I
Sbjct: 16 VGEL-GDGAFGKVYKAKNKETGALAAAKVIETKS----EEELEDYIVEIEILATCDHPYI 70
Query: 438 IKLLDEYDTNNELYLVIELIKGGDLFDAISKNV--KFSEEDSKFMTQSLASALSYLHDNY 495
+KLL Y + +L+++IE GG + DAI + +E + + + + AL++LH
Sbjct: 71 VKLLGAYYHDGKLWIMIEFCPGGAV-DAIMLELDRGLTEPQIQVVCRQMLEALNFLHSKR 129
Query: 496 IVHRDIKPENLLVEMSGCHVKVLKVGDFGLAQRVLRPMF---TVCGTPTYVAPEI----- 547
I+HRD+K N+L+ + G +++ DFG++ + L+ + + GTP ++APE+
Sbjct: 130 IIHRDLKAGNVLMTLEGD----IRLADFGVSAKNLKTLQKRDSFIGTPYWMAPEVVMCET 185
Query: 548 LNESGYGVKIDVWAAGVILYILLCGFPPFVSDTNDQDELFDDILSGQYGFPSPYWDDISE 607
+ ++ Y K D+W+ G+ L I + P + N L S +P S
Sbjct: 186 MKDTPYDYKADIWSLGITL-IEMAQIEPPHHELNPMRVLLKIAKSDPPTLLTP--SKWSV 242
Query: 608 EAKELISHMLESNPDLRFSAEDVLDHPWL 636
E ++ + L+ NP+ R SA +L+HP++
Sbjct: 243 EFRDFLKIALDKNPETRPSAAQLLEHPFV 271
>pdb|2ACX|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
pdb|2ACX|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
Length = 576
Score = 101 bits (252), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 81/272 (29%), Positives = 123/272 (45%), Gaps = 27/272 (9%)
Query: 383 QIIGDGNFAVVR--QVYDKHKDMDCALKIIDKSKLLGKKQMIENEVNILRSVNHPNIIKL 440
+++G G F V QV K C + K + M NE IL VN ++ L
Sbjct: 190 RVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKQILEKVNSRFVVSL 249
Query: 441 LDEYDTNNELYLVIELIKGGDLFDAISK--NVKFSEEDSKFMTQSLASALSYLHDNYIVH 498
Y+T + L LV+ L+ GGDL I F E + F + L LH IV+
Sbjct: 250 AYAYETKDALCLVLTLMNGGDLKFHIYHMGQAGFPEARAVFYAAEICCGLEDLHRERIVY 309
Query: 499 RDIKPENLLVEMSGCHVKVLKVGDFGLAQRVL--RPMFTVCGTPTYVAPEILNESGYGVK 556
RD+KPEN+L++ G H+++ D GLA V + + GT Y+APE++ Y
Sbjct: 310 RDLKPENILLDDHG-HIRI---SDLGLAVHVPEGQTIKGRVGTVGYMAPEVVKNERYTFS 365
Query: 557 IDVWAAGVILYILLCGFPPFVS-----DTNDQDELFDDILSGQYGFPSPYWDDISEEAKE 611
D WA G +LY ++ G PF + + L ++ P Y + S +A+
Sbjct: 366 PDWWALGCLLYEMIAGQSPFQQRKKKIKREEVERLVKEV-------PEEYSERFSPQARS 418
Query: 612 LISHMLESNPDLRF-----SAEDVLDHPWLER 638
L S +L +P R SA +V +HP ++
Sbjct: 419 LCSQLLCKDPAERLGCRGGSAREVKEHPLFKK 450
>pdb|1O6Y|A Chain A, Catalytic Domain Of Pknb Kinase From Mycobacterium
Tuberculosis
pdb|2FUM|A Chain A, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|B Chain B, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|C Chain C, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|D Chain D, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
Length = 299
Score = 100 bits (248), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 72/282 (25%), Positives = 129/282 (45%), Gaps = 32/282 (11%)
Query: 363 IKRRENLNIPSKLLQRYSVGQIIGDGNFAVVRQVYDKHKDMDCALKII------DKSKLL 416
+ R ++ PS L RY +G+I+G G + V D D A+K++ D S L
Sbjct: 15 VPRGSHMTTPSHLSDRYELGEILGFGGMSEVHLARDLRLHRDVAVKVLRADLARDPSFYL 74
Query: 417 GKKQMIENEVNILRSVNHPNIIKLLDEYDTNNEL----YLVIELIKGGDLFDAISKNVKF 472
++ +N ++NHP I+ + D + Y+V+E + G L D +
Sbjct: 75 RFRREAQNAA----ALNHPAIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGPM 130
Query: 473 SEEDSKFMTQSLASALSYLHDNYIVHRDIKPENLLVEMSGCHVKVLKVGDFGLAQRV--- 529
+ + + + AL++ H N I+HRD+KP N+++ + +KV DFG+A+ +
Sbjct: 131 TPKRAIEVIADACQALNFSHQNGIIHRDVKPANIMISAT----NAVKVMDFGIARAIADS 186
Query: 530 ---LRPMFTVCGTPTYVAPEILNESGYGVKIDVWAAGVILYILLCGFPPFVSDTN---DQ 583
+ V GT Y++PE + DV++ G +LY +L G PPF D+
Sbjct: 187 GNSVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPFTGDSPVSVAY 246
Query: 584 DELFDDILSGQYGFPSPYWDDISEEAKELISHMLESNPDLRF 625
+ +D + PS + +S + ++ L NP+ R+
Sbjct: 247 QHVREDPIP-----PSARHEGLSADLDAVVLKALAKNPENRY 283
>pdb|3F69|A Chain A, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
pdb|3F69|B Chain B, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
Length = 311
Score = 100 bits (248), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 72/277 (25%), Positives = 127/277 (45%), Gaps = 32/277 (11%)
Query: 368 NLNIPSKLLQRYSVGQIIGDGNFAVVRQVYDKHKDMDCALKII------DKSKLLGKKQM 421
++ PS L RY +G+I+G G + V D D A+K++ D S L ++
Sbjct: 3 HMTTPSHLSDRYELGEILGFGGMSEVHLARDLRDHRDVAVKVLRADLARDPSFYLRFRRE 62
Query: 422 IENEVNILRSVNHPNIIKLLDEYDTNNEL----YLVIELIKGGDLFDAISKNVKFSEEDS 477
+N ++NHP I+ + D + Y+V+E + G L D + + + +
Sbjct: 63 AQNAA----ALNHPAIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGPMTPKRA 118
Query: 478 KFMTQSLASALSYLHDNYIVHRDIKPENLLVEMSGCHVKVLKVGDFGLAQRV------LR 531
+ AL++ H N I+HRD+KP N+L+ + +KV DFG+A+ + +
Sbjct: 119 IEVIADACQALNFSHQNGIIHRDVKPANILISATNA----VKVVDFGIARAIADSGNSVX 174
Query: 532 PMFTVCGTPTYVAPEILNESGYGVKIDVWAAGVILYILLCGFPPFVSDTN---DQDELFD 588
V GT Y++PE + DV++ G +LY +L G PPF D+ + +
Sbjct: 175 QTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPFTGDSPVSVAYQHVRE 234
Query: 589 DILSGQYGFPSPYWDDISEEAKELISHMLESNPDLRF 625
D + PS + +S + ++ L NP+ R+
Sbjct: 235 DPIP-----PSARHEGLSADLDAVVLKALAKNPENRY 266
>pdb|3ORI|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|B Chain B, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|C Chain C, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|D Chain D, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORK|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 2)
pdb|3ORL|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 3)
pdb|3ORO|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 4)
pdb|3ORP|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 5)
pdb|3ORT|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 6)
Length = 311
Score = 99.4 bits (246), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 71/277 (25%), Positives = 127/277 (45%), Gaps = 32/277 (11%)
Query: 368 NLNIPSKLLQRYSVGQIIGDGNFAVVRQVYDKHKDMDCALKII------DKSKLLGKKQM 421
++ PS L RY +G+I+G G + V D D A+K++ D S L ++
Sbjct: 3 HMTTPSHLSDRYELGEILGFGGMSEVHLARDLRDHRDVAVKVLRADLARDPSFYLRFRRE 62
Query: 422 IENEVNILRSVNHPNIIKLLDEYDTNNEL----YLVIELIKGGDLFDAISKNVKFSEEDS 477
+N ++NHP I+ + D + Y+V+E + G L D + + + +
Sbjct: 63 AQNAA----ALNHPAIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGPMTPKRA 118
Query: 478 KFMTQSLASALSYLHDNYIVHRDIKPENLLVEMSGCHVKVLKVGDFGLAQRV------LR 531
+ AL++ H N I+HRD+KP N+++ + +KV DFG+A+ + +
Sbjct: 119 IEVIADACQALNFSHQNGIIHRDVKPANIMISATNA----VKVMDFGIARAIADSGNSVT 174
Query: 532 PMFTVCGTPTYVAPEILNESGYGVKIDVWAAGVILYILLCGFPPFVSDTN---DQDELFD 588
V GT Y++PE + DV++ G +LY +L G PPF D+ + +
Sbjct: 175 QTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPFTGDSPVSVAYQHVRE 234
Query: 589 DILSGQYGFPSPYWDDISEEAKELISHMLESNPDLRF 625
D + PS + +S + ++ L NP+ R+
Sbjct: 235 DPIP-----PSARHEGLSADLDAVVLKALAKNPENRY 266
>pdb|3KRW|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Soak)
pdb|3KRX|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Co-Crystal)
Length = 688
Score = 99.0 bits (245), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 78/272 (28%), Positives = 140/272 (51%), Gaps = 23/272 (8%)
Query: 379 YSVGQIIGDGNFAVVRQVYDKHKDMDCALKIIDKSKLLGKK--QMIENE---VNILRSVN 433
+SV +IIG G F V A+K +DK ++ K+ + NE ++++ + +
Sbjct: 190 FSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGD 249
Query: 434 HPNIIKLLDEYDTNNELYLVIELIKGGDLFDAISKNVKFSEEDSKFMTQSLASALSYLHD 493
P I+ + + T ++L +++L+ GGDL +S++ FSE D +F + L ++H+
Sbjct: 250 CPFIVCMSYAFHTPDKLSFILDLMNGGDLHYHLSQHGVFSEADMRFYAAEIILGLEHMHN 309
Query: 494 NYIVHRDIKPENLLVEMSGCHVKVLKVGDFGLAQRV--LRPMFTVCGTPTYVAPEILNES 551
++V+RD+KP N+L++ G HV ++ D GLA +P +V GT Y+APE+L +
Sbjct: 310 RFVVYRDLKPANILLDEHG-HV---RISDLGLACDFSKKKPHASV-GTHGYMAPEVLQKG 364
Query: 552 -GYGVKIDVWAAGVILYILLCGFPPFVS-DTNDQDELFDDILSGQYGFPSPYWDDISEEA 609
Y D ++ G +L+ LL G PF T D+ E+ L+ P D S E
Sbjct: 365 VAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHEIDRMTLTMAVELP----DSFSPEL 420
Query: 610 KELISHMLESNPDLRF-----SAEDVLDHPWL 636
+ L+ +L+ + + R A++V + P+
Sbjct: 421 RSLLEGLLQRDVNRRLGCLGRGAQEVKESPFF 452
>pdb|3CIK|A Chain A, Human Grk2 In Complex With Gbetagamma Subunits
pdb|3V5W|A Chain A, Human G Protein-Coupled Receptor Kinase 2 In Complex With
Soluble Gbetagamma Subunits And Paroxetine
Length = 689
Score = 99.0 bits (245), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 78/272 (28%), Positives = 140/272 (51%), Gaps = 23/272 (8%)
Query: 379 YSVGQIIGDGNFAVVRQVYDKHKDMDCALKIIDKSKLLGKK--QMIENE---VNILRSVN 433
+SV +IIG G F V A+K +DK ++ K+ + NE ++++ + +
Sbjct: 191 FSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGD 250
Query: 434 HPNIIKLLDEYDTNNELYLVIELIKGGDLFDAISKNVKFSEEDSKFMTQSLASALSYLHD 493
P I+ + + T ++L +++L+ GGDL +S++ FSE D +F + L ++H+
Sbjct: 251 CPFIVCMSYAFHTPDKLSFILDLMNGGDLHYHLSQHGVFSEADMRFYAAEIILGLEHMHN 310
Query: 494 NYIVHRDIKPENLLVEMSGCHVKVLKVGDFGLAQRV--LRPMFTVCGTPTYVAPEILNES 551
++V+RD+KP N+L++ G HV ++ D GLA +P +V GT Y+APE+L +
Sbjct: 311 RFVVYRDLKPANILLDEHG-HV---RISDLGLACDFSKKKPHASV-GTHGYMAPEVLQKG 365
Query: 552 -GYGVKIDVWAAGVILYILLCGFPPFVS-DTNDQDELFDDILSGQYGFPSPYWDDISEEA 609
Y D ++ G +L+ LL G PF T D+ E+ L+ P D S E
Sbjct: 366 VAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHEIDRMTLTMAVELP----DSFSPEL 421
Query: 610 KELISHMLESNPDLRF-----SAEDVLDHPWL 636
+ L+ +L+ + + R A++V + P+
Sbjct: 422 RSLLEGLLQRDVNRRLGCLGRGAQEVKESPFF 453
>pdb|1MRU|A Chain A, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb.
pdb|1MRU|B Chain B, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb
Length = 311
Score = 98.6 bits (244), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 71/277 (25%), Positives = 127/277 (45%), Gaps = 32/277 (11%)
Query: 368 NLNIPSKLLQRYSVGQIIGDGNFAVVRQVYDKHKDMDCALKII------DKSKLLGKKQM 421
++ PS L RY +G+I+G G + V D D A+K++ D S L ++
Sbjct: 3 HMTTPSHLSDRYELGEILGFGGMSEVHLARDLRLHRDVAVKVLRADLARDPSFYLRFRRE 62
Query: 422 IENEVNILRSVNHPNIIKLLDEYDTNNEL----YLVIELIKGGDLFDAISKNVKFSEEDS 477
+N ++NHP I+ + D + Y+V+E + G L D + + + +
Sbjct: 63 AQNAA----ALNHPAIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGPMTPKRA 118
Query: 478 KFMTQSLASALSYLHDNYIVHRDIKPENLLVEMSGCHVKVLKVGDFGLAQRV------LR 531
+ AL++ H N I+HRD+KP N+++ + +KV DFG+A+ + +
Sbjct: 119 IEVIADACQALNFSHQNGIIHRDVKPANIMISAT----NAVKVMDFGIARAIADSGNSVT 174
Query: 532 PMFTVCGTPTYVAPEILNESGYGVKIDVWAAGVILYILLCGFPPFVSDTN---DQDELFD 588
V GT Y++PE + DV++ G +LY +L G PPF D+ + +
Sbjct: 175 QTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPFTGDSPVSVAYQHVRE 234
Query: 589 DILSGQYGFPSPYWDDISEEAKELISHMLESNPDLRF 625
D + PS + +S + ++ L NP+ R+
Sbjct: 235 DPIP-----PSARHEGLSADLDAVVLKALAKNPENRY 266
>pdb|1OMW|A Chain A, Crystal Structure Of The Complex Between G Protein-Coupled
Receptor Kinase 2 And Heterotrimeric G Protein Beta 1
And Gamma 2 Subunits
pdb|1YM7|A Chain A, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|B Chain B, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|C Chain C, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|D Chain D, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|2BCJ|A Chain A, Crystal Structure Of G Protein-coupled Receptor Kinase 2
In Complex With Galpha-q And Gbetagamma Subunits
pdb|3UZS|A Chain A, Structure Of The C13.28 Rna Aptamer Bound To The G
Protein-Coupled Receptor Kinase 2-Heterotrimeric G
Protein Beta 1 And Gamma 2 Subunit Complex
pdb|3UZT|A Chain A, Structure Of The C13.18 Rna Aptamer In Complex With G
Protein-Coupled Receptor Kinase 2
Length = 689
Score = 98.6 bits (244), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 78/272 (28%), Positives = 140/272 (51%), Gaps = 23/272 (8%)
Query: 379 YSVGQIIGDGNFAVVRQVYDKHKDMDCALKIIDKSKLLGKK--QMIENE---VNILRSVN 433
+SV +IIG G F V A+K +DK ++ K+ + NE ++++ + +
Sbjct: 191 FSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGD 250
Query: 434 HPNIIKLLDEYDTNNELYLVIELIKGGDLFDAISKNVKFSEEDSKFMTQSLASALSYLHD 493
P I+ + + T ++L +++L+ GGDL +S++ FSE D +F + L ++H+
Sbjct: 251 CPFIVCMSYAFHTPDKLSFILDLMNGGDLHYHLSQHGVFSEADMRFYAAEIILGLEHMHN 310
Query: 494 NYIVHRDIKPENLLVEMSGCHVKVLKVGDFGLAQRV--LRPMFTVCGTPTYVAPEILNES 551
++V+RD+KP N+L++ G HV ++ D GLA +P +V GT Y+APE+L +
Sbjct: 311 RFVVYRDLKPANILLDEHG-HV---RISDLGLACDFSKKKPHASV-GTHGYMAPEVLQKG 365
Query: 552 -GYGVKIDVWAAGVILYILLCGFPPFVS-DTNDQDELFDDILSGQYGFPSPYWDDISEEA 609
Y D ++ G +L+ LL G PF T D+ E+ L+ P D S E
Sbjct: 366 VAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHEIDRMTLTMAVELP----DSFSPEL 421
Query: 610 KELISHMLESNPDLRF-----SAEDVLDHPWL 636
+ L+ +L+ + + R A++V + P+
Sbjct: 422 RSLLEGLLQRDVNRRLGCLGRGAQEVKESPFF 453
>pdb|3PSC|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits
pdb|3PVU|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd101)
pdb|3PVW|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd103a)
Length = 695
Score = 98.6 bits (244), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 78/272 (28%), Positives = 140/272 (51%), Gaps = 23/272 (8%)
Query: 379 YSVGQIIGDGNFAVVRQVYDKHKDMDCALKIIDKSKLLGKK--QMIENE---VNILRSVN 433
+SV +IIG G F V A+K +DK ++ K+ + NE ++++ + +
Sbjct: 191 FSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGD 250
Query: 434 HPNIIKLLDEYDTNNELYLVIELIKGGDLFDAISKNVKFSEEDSKFMTQSLASALSYLHD 493
P I+ + + T ++L +++L+ GGDL +S++ FSE D +F + L ++H+
Sbjct: 251 CPFIVCMSYAFHTPDKLSFILDLMNGGDLHYHLSQHGVFSEADMRFYAAEIILGLEHMHN 310
Query: 494 NYIVHRDIKPENLLVEMSGCHVKVLKVGDFGLAQRV--LRPMFTVCGTPTYVAPEILNES 551
++V+RD+KP N+L++ G HV ++ D GLA +P +V GT Y+APE+L +
Sbjct: 311 RFVVYRDLKPANILLDEHG-HV---RISDLGLACDFSKKKPHASV-GTHGYMAPEVLQKG 365
Query: 552 -GYGVKIDVWAAGVILYILLCGFPPFVS-DTNDQDELFDDILSGQYGFPSPYWDDISEEA 609
Y D ++ G +L+ LL G PF T D+ E+ L+ P D S E
Sbjct: 366 VAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHEIDRMTLTMAVELP----DSFSPEL 421
Query: 610 KELISHMLESNPDLRF-----SAEDVLDHPWL 636
+ L+ +L+ + + R A++V + P+
Sbjct: 422 RSLLEGLLQRDVNRRLGCLGRGAQEVKESPFF 453
>pdb|3OHT|A Chain A, Crystal Structure Of Salmo Salar P38alpha
pdb|3OHT|B Chain B, Crystal Structure Of Salmo Salar P38alpha
Length = 389
Score = 97.8 bits (242), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 71/224 (31%), Positives = 112/224 (50%), Gaps = 17/224 (7%)
Query: 362 TIKRRENLNIPSKLLQRYSVGQIIGDGNFAVVRQVYDKHKDMDCALKIIDKS-KLLGKKQ 420
T R+E ++ +RY +G G + V YD + A+K + + + + +
Sbjct: 36 TFYRQELNKTIWEVPERYQTLSPVGSGAYGSVCSSYDVKSGLKIAVKKLSRPFQSIIHAK 95
Query: 421 MIENEVNILRSVNHPNIIKLLDEY------DTNNELYLVIELIKGGDLFDAISKNVKFSE 474
E+ +L+ + H N+I LLD + + N++YLV L+ G DL + I K K ++
Sbjct: 96 RTYRELRLLKHMKHENVIGLLDVFTPATSLEEFNDVYLVTHLM-GADL-NNIVKCQKLTD 153
Query: 475 EDSKFMTQSLASALSYLHDNYIVHRDIKPENLLVEMSGCHVKVLKVGDFGLAQRVLRPMF 534
+ +F+ + L Y+H I+HRD+KP NL V C +K+L DFGLA+ M
Sbjct: 154 DHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVN-EDCELKIL---DFGLARHTDDEMT 209
Query: 535 TVCGTPTYVAPEI-LNESGYGVKIDVWAAGVILYILLCG---FP 574
T Y APEI LN Y + +D+W+ G I+ LL G FP
Sbjct: 210 GYVATRWYRAPEIMLNWMHYNMTVDIWSVGCIMAELLTGRTLFP 253
>pdb|2ZOQ|A Chain A, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
pdb|2ZOQ|B Chain B, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
Length = 382
Score = 97.4 bits (241), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 89/302 (29%), Positives = 137/302 (45%), Gaps = 51/302 (16%)
Query: 378 RYSVGQIIGDGNFAVVRQVYDKHKDMDCALKIIDKSKLLGKKQMIENEVNILRSVNHPNI 437
RY+ Q IG+G + +V YD + A+K I + Q E+ IL H N+
Sbjct: 44 RYTQLQYIGEGAYGMVSSAYDHVRKTRVAIKKISPFEHQTYCQRTLREIQILLRFRHENV 103
Query: 438 IKLLD-----EYDTNNELYLVIELIKGGDLFDAISKNVKFSEEDSKFMTQSLASALSYLH 492
I + D + ++Y+V +L++ DL+ + K+ + S + + + L Y+H
Sbjct: 104 IGIRDILRASTLEAMRDVYIVQDLMET-DLYKLL-KSQQLSNDHICYFLYQILRGLKYIH 161
Query: 493 DNYIVHRDIKPENLLVEMSGCHVKVLKVGDFGLAQRVLRP-------MFTVCGTPTYVAP 545
++HRD+KP NLL+ + C LK+ DFGLA R+ P + T Y AP
Sbjct: 162 SANVLHRDLKPSNLLINTT-CD---LKICDFGLA-RIADPEHDHTGFLTEXVATRWYRAP 216
Query: 546 EI-LNESGYGVKIDVWAAGVILYILLCGFPPFVSDTNDQDELFDDILSGQYGFPSP---- 600
EI LN GY ID+W+ G IL +L P F + D+L + IL G G PS
Sbjct: 217 EIMLNSKGYTKSIDIWSVGCILAEMLSNRPIF-PGKHYLDQL-NHIL-GILGSPSQEDLN 273
Query: 601 --------------------YWDDI----SEEAKELISHMLESNPDLRFSAEDVLDHPWL 636
W + +A +L+ ML NP+ R + E+ L HP+L
Sbjct: 274 CIINMKARNYLQSLPSKTKVAWAKLFPKSDSKALDLLDRMLTFNPNKRITVEEALAHPYL 333
Query: 637 ER 638
E+
Sbjct: 334 EQ 335
>pdb|2VD5|A Chain A, Structure Of Human Myotonic Dystrophy Protein Kinase In
Complex With The Bisindoylmaleide Inhibitor Bim Viii
pdb|2VD5|B Chain B, Structure Of Human Myotonic Dystrophy Protein Kinase In
Complex With The Bisindoylmaleide Inhibitor Bim Viii
Length = 412
Score = 97.4 bits (241), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 88/282 (31%), Positives = 137/282 (48%), Gaps = 29/282 (10%)
Query: 376 LQR--YSVGQIIGDGNFAVVRQVYDKHKDMDCALKIIDKSKLL--GKKQMIENEVNILRS 431
LQR + + ++IG G F+ V V K A+KI++K +L G+ E ++L +
Sbjct: 58 LQRDDFEILKVIGRGAFSEVAVVKMKQTGQVYAMKIMNKWDMLKRGEVSCFREERDVLVN 117
Query: 432 VNHPNIIKLLDEYDTNNELYLVIELIKGGDLFDAISK-NVKFSEEDSKFMTQSLASALSY 490
+ I +L + N LYLV+E GGDL +SK + E ++F + A+
Sbjct: 118 GDRRWITQLHFAFQDENYLYLVMEYYVGGDLLTLLSKFGERIPAEMARFYLAEIVMAIDS 177
Query: 491 LHDNYIVHRDIKPENLLVEMSGCHVKVLKVGDFG-----LAQRVLRPMFTVCGTPTYVAP 545
+H VHRDIKP+N+L++ G H+ ++ DFG A +R + V GTP Y++P
Sbjct: 178 VHRLGYVHRDIKPDNILLDRCG-HI---RLADFGSCLKLRADGTVRSLVAV-GTPDYLSP 232
Query: 546 EILNESGYGV-------KIDVWAAGVILYILLCGFPPFVSDTNDQDELFDDILSGQYGFP 598
EIL G G + D WA GV Y + G PF +D+ E + I+ +
Sbjct: 233 EILQAVGGGPGTGSYGPECDWWALGVFAYEMFYGQTPFYADST--AETYGKIVHYKEHLS 290
Query: 599 SPYWDD-ISEEAKELISHMLESNPDLRF---SAEDVLDHPWL 636
P D+ + EEA++ I +L P+ R A D HP+
Sbjct: 291 LPLVDEGVPEEARDFIQRLL-CPPETRLGRGGAGDFRTHPFF 331
>pdb|3RZF|A Chain A, Crystal Structure Of Inhibitor Of Kappab Kinase Beta
(I4122)
Length = 677
Score = 97.4 bits (241), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 65/254 (25%), Positives = 121/254 (47%), Gaps = 26/254 (10%)
Query: 370 NIPSKLLQRYSVGQIIGDGNFAVVRQVYDKHKDMDCALKIIDKSKLLGKKQMIENEVNIL 429
++P++ + + + +G G F V + + A+K + ++ E+ I+
Sbjct: 8 SLPTQTCGPWEMKERLGTGGFGYVLRWIHQDTGEQVAIKQCRQELSPKNRERWCLEIQIM 67
Query: 430 RSVNHPNIIKL------LDEYDTNNELYLVIELIKGGDL---FDAISKNVKFSEEDSKFM 480
+ +NHPN++ L + N+ L +E +GGDL + E + +
Sbjct: 68 KKLNHPNVVSAREVPDGLQKLAPNDLPLLAMEYCEGGDLRKYLNQFENCCGLKEGPIRTL 127
Query: 481 TQSLASALSYLHDNYIVHRDIKPENLLVEMSGCHVKVLKVGDFGLAQRVLRPMFTV--CG 538
++SAL YLH+N I+HRD+KPEN++++ G + K+ D G A+ + + G
Sbjct: 128 LSDISSALRYLHENRIIHRDLKPENIVLQ-PGPQRLIHKIIDLGYAKELDQGELCTEFVG 186
Query: 539 TPTYVAPEILNESGYGVKIDVWAAGVILYILLCGFPPFVSD-------------TNDQDE 585
T Y+APE+L + Y V +D W+ G + + + GF PF+ + +N+
Sbjct: 187 TLQYLAPELLEQKKYTVTVDYWSFGTLAFECITGFRPFLPNWQPVQWHGKVREKSNEHIV 246
Query: 586 LFDDILSGQYGFPS 599
++DD L+G F S
Sbjct: 247 VYDD-LTGAVKFSS 259
>pdb|3QA8|A Chain A, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|B Chain B, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|C Chain C, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|D Chain D, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|E Chain E, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|F Chain F, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|G Chain G, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|H Chain H, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
Length = 676
Score = 97.4 bits (241), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 65/254 (25%), Positives = 121/254 (47%), Gaps = 26/254 (10%)
Query: 370 NIPSKLLQRYSVGQIIGDGNFAVVRQVYDKHKDMDCALKIIDKSKLLGKKQMIENEVNIL 429
++P++ + + + +G G F V + + A+K + ++ E+ I+
Sbjct: 7 SLPTQTCGPWEMKERLGTGGFGYVLRWIHQDTGEQVAIKQCRQELSPKNRERWCLEIQIM 66
Query: 430 RSVNHPNIIKL------LDEYDTNNELYLVIELIKGGDL---FDAISKNVKFSEEDSKFM 480
+ +NHPN++ L + N+ L +E +GGDL + E + +
Sbjct: 67 KKLNHPNVVSAREVPDGLQKLAPNDLPLLAMEYCEGGDLRKYLNQFENCCGLKEGPIRTL 126
Query: 481 TQSLASALSYLHDNYIVHRDIKPENLLVEMSGCHVKVLKVGDFGLAQRVLRPMFTV--CG 538
++SAL YLH+N I+HRD+KPEN++++ G + K+ D G A+ + + G
Sbjct: 127 LSDISSALRYLHENRIIHRDLKPENIVLQ-PGPQRLIHKIIDLGYAKELDQGELCTEFVG 185
Query: 539 TPTYVAPEILNESGYGVKIDVWAAGVILYILLCGFPPFVSD-------------TNDQDE 585
T Y+APE+L + Y V +D W+ G + + + GF PF+ + +N+
Sbjct: 186 TLQYLAPELLEQKKYTVTVDYWSFGTLAFECITGFRPFLPNWQPVQWHGKVREKSNEHIV 245
Query: 586 LFDDILSGQYGFPS 599
++DD L+G F S
Sbjct: 246 VYDD-LTGAVKFSS 258
>pdb|3SLS|A Chain A, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
pdb|3SLS|B Chain B, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
Length = 304
Score = 96.7 bits (239), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 78/294 (26%), Positives = 144/294 (48%), Gaps = 26/294 (8%)
Query: 362 TIKRRENLNIPSKLLQRYSVGQI----------IGDGNFAVVRQVYDKHKDMDCALKIID 411
T+++R+ L + L Q+ VG++ +G GN VV +V K + A K+I
Sbjct: 2 TLQQRKRLE--AFLTQKQKVGELKDDDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIH 59
Query: 412 KSKLLGKKQMIENEVNILRSVNHPNIIKLLDEYDTNNELYLVIELIKGGDLFDAISKNVK 471
+ I E+ +L N P I+ + ++ E+ + +E + GG L + K +
Sbjct: 60 LEIKPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGR 119
Query: 472 FSEEDSKFMTQSLASALSYLHDNY-IVHRDIKPENLLVEMSGCHVKVLKVGDFGLAQRVL 530
E+ ++ ++ L+YL + + I+HRD+KP N+LV G +K+ DFG++ +++
Sbjct: 120 IPEQILGKVSIAVIKGLTYLREKHKIMHRDVKPSNILVNSRG----EIKLCDFGVSGQLI 175
Query: 531 RPMF-TVCGTPTYVAPEILNESGYGVKIDVWAAGVILYILLCGFPPFVSDTNDQD--ELF 587
M + GT +Y++PE L + Y V+ D+W+ G+ L + G P S + EL
Sbjct: 176 DSMANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPIGSGSGSMAIFELL 235
Query: 588 DDILSGQYGFPSPYWDD--ISEEAKELISHMLESNPDLRFSAEDVLDHPWLERS 639
D I++ P P S E ++ ++ L NP R + ++ H +++RS
Sbjct: 236 DYIVNE----PPPKLPSGVFSLEFQDFVNKCLIKNPAERADLKQLMVHAFIKRS 285
>pdb|4FK3|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
pdb|4FK3|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
Length = 292
Score = 96.3 bits (238), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 66/224 (29%), Positives = 116/224 (51%), Gaps = 19/224 (8%)
Query: 380 SVGQIIGDGNFAVVRQVYDKHKDMDCALKIIDKSKLLGKK-QMIENEVNILRSVNHPNII 438
+VGQ IG G+F V Y D A+K+++ + ++ Q +NEV +LR H NI+
Sbjct: 27 TVGQRIGSGSFGTV---YKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNIL 83
Query: 439 KLLDEYDTNNELYLVIELIKGGDLFDAI-SKNVKFSEEDSKFMTQSLASALSYLHDNYIV 497
L Y T +L +V + +G L+ + + KF + + + A + YLH I+
Sbjct: 84 -LFMGYSTKPQLAIVTQWCEGSSLYHHLHASETKFEMKKLIDIARQTARGMDYLHAKSII 142
Query: 498 HRDIKPENLLVEMSGCHVKVLKVGDFGLAQRVLR-----PMFTVCGTPTYVAPEIL---N 549
HRD+K N+ + +K+GDFGLA R + G+ ++APE++ +
Sbjct: 143 HRDLKSNNIFLHED----NTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIRMQD 198
Query: 550 ESGYGVKIDVWAAGVILYILLCGFPPFVSDTNDQDELFDDILSG 593
+ Y + DV+A G++LY L+ G P+ S+ N++D++ + + G
Sbjct: 199 SNPYSFQSDVYAFGIVLYELMTGQLPY-SNINNRDQIIEMVGRG 241
>pdb|3GP0|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 11 (p38 Beta) In Complex With Nilotinib
Length = 348
Score = 96.3 bits (238), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 77/235 (32%), Positives = 116/235 (49%), Gaps = 23/235 (9%)
Query: 377 QRYSVGQIIGDGNFAVVRQVYDKHKDMDCALKIIDKS-KLLGKKQMIENEVNILRSVNHP 435
QR + +G G + V YD A+K + + + L + E+ +L+ + H
Sbjct: 20 QRLQGLRPVGSGAYGSVCSAYDARLRQKVAVKKLSRPFQSLIHARRTYRELRLLKHLKHE 79
Query: 436 NIIKLLDEY------DTNNELYLVIELIKGGDLFDAISKNVKFSEEDSKFMTQSLASALS 489
N+I LLD + + +E+YLV L+ G DL + I K S+E +F+ L L
Sbjct: 80 NVIGLLDVFTPATSIEDFSEVYLVTTLM-GADL-NNIVKCQALSDEHVQFLVYQLLRGLK 137
Query: 490 YLHDNYIVHRDIKPENLLVEMSGCHVKVLKVGDFGLAQRVLRPMFTVCGTPTYVAPEI-L 548
Y+H I+HRD+KP N+ V C +++L DFGLA++ M T Y APEI L
Sbjct: 138 YIHSAGIIHRDLKPSNVAVN-EDCELRIL---DFGLARQADEEMTGYVATRWYRAPEIML 193
Query: 549 NESGYGVKIDVWAAGVILYILLCG---FPPFVSDTNDQDELFDDILSGQYGFPSP 600
N Y +D+W+ G I+ LL G FP SD DQ + +++ G PSP
Sbjct: 194 NWMHYNQTVDIWSVGCIMAELLQGKALFPG--SDYIDQLKRIMEVV----GTPSP 242
>pdb|3OG7|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
pdb|3OG7|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
Length = 289
Score = 96.3 bits (238), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 66/224 (29%), Positives = 116/224 (51%), Gaps = 19/224 (8%)
Query: 380 SVGQIIGDGNFAVVRQVYDKHKDMDCALKIIDKSKLLGKK-QMIENEVNILRSVNHPNII 438
+VGQ IG G+F V Y D A+K+++ + ++ Q +NEV +LR H NI+
Sbjct: 27 TVGQRIGSGSFGTV---YKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNIL 83
Query: 439 KLLDEYDTNNELYLVIELIKGGDLFDAI-SKNVKFSEEDSKFMTQSLASALSYLHDNYIV 497
L Y T +L +V + +G L+ + + KF + + + A + YLH I+
Sbjct: 84 -LFMGYSTAPQLAIVTQWCEGSSLYHHLHASETKFEMKKLIDIARQTARGMDYLHAKSII 142
Query: 498 HRDIKPENLLVEMSGCHVKVLKVGDFGLAQRVLR-----PMFTVCGTPTYVAPEIL---N 549
HRD+K N+ + +K+GDFGLA R + G+ ++APE++ +
Sbjct: 143 HRDLKSNNIFLHED----NTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIRMQD 198
Query: 550 ESGYGVKIDVWAAGVILYILLCGFPPFVSDTNDQDELFDDILSG 593
+ Y + DV+A G++LY L+ G P+ S+ N++D++ + + G
Sbjct: 199 SNPYSFQSDVYAFGIVLYELMTGQLPY-SNINNRDQIIEMVGRG 241
>pdb|4EQM|A Chain A, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|B Chain B, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|C Chain C, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|D Chain D, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|E Chain E, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|F Chain F, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
Length = 294
Score = 96.3 bits (238), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 64/213 (30%), Positives = 109/213 (51%), Gaps = 16/213 (7%)
Query: 377 QRYSVGQIIGDGNFAVVRQVYDKHKDMDCALKII-----DKSKLLGKKQMIENEVNILRS 431
+RY + +G G + V D ++ A+K I +K + L + E EV+
Sbjct: 11 ERYKIVDKLGGGGMSTVYLAEDTILNIKVAIKAIFIPPREKEETLKR---FEREVHNSSQ 67
Query: 432 VNHPNIIKLLDEYDTNNELYLVIELIKGGDLFDAISKNVKFSEEDSKFMTQSLASALSYL 491
++H NI+ ++D + ++ YLV+E I+G L + I + S + + T + + +
Sbjct: 68 LSHQNIVSMIDVDEEDDCYYLVMEYIEGPTLSEYIESHGPLSVDTAINFTNQILDGIKHA 127
Query: 492 HDNYIVHRDIKPENLLVEMSGCHVKVLKVGDFGLAQRVLRPMFT----VCGTPTYVAPEI 547
HD IVHRDIKP+N+L++ + K LK+ DFG+A+ + T V GT Y +PE
Sbjct: 128 HDMRIVHRDIKPQNILIDSN----KTLKIFDFGIAKALSETSLTQTNHVLGTVQYFSPEQ 183
Query: 548 LNESGYGVKIDVWAAGVILYILLCGFPPFVSDT 580
D+++ G++LY +L G PPF +T
Sbjct: 184 AKGEATDECTDIYSIGIVLYEMLVGEPPFNGET 216
>pdb|3ORM|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain D76a Mutant
Length = 311
Score = 95.9 bits (237), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 70/277 (25%), Positives = 126/277 (45%), Gaps = 32/277 (11%)
Query: 368 NLNIPSKLLQRYSVGQIIGDGNFAVVRQVYDKHKDMDCALKII------DKSKLLGKKQM 421
++ PS L RY +G+I+G G + V D D A+K++ D S L ++
Sbjct: 3 HMTTPSHLSDRYELGEILGFGGMSEVHLARDLRLHRDVAVKVLRADLARDPSFYLRFRRE 62
Query: 422 IENEVNILRSVNHPNIIKLLDEYDTNNEL----YLVIELIKGGDLFDAISKNVKFSEEDS 477
+N ++NHP I+ + + Y+V+E + G L D + + + +
Sbjct: 63 AQNAA----ALNHPAIVAVYATGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGPMTPKRA 118
Query: 478 KFMTQSLASALSYLHDNYIVHRDIKPENLLVEMSGCHVKVLKVGDFGLAQRV------LR 531
+ AL++ H N I+HRD+KP N+++ + +KV DFG+A+ + +
Sbjct: 119 IEVIADACQALNFSHQNGIIHRDVKPANIMISAT----NAVKVMDFGIARAIADSGNSVT 174
Query: 532 PMFTVCGTPTYVAPEILNESGYGVKIDVWAAGVILYILLCGFPPFVSDTN---DQDELFD 588
V GT Y++PE + DV++ G +LY +L G PPF D+ + +
Sbjct: 175 QTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPFTGDSPVSVAYQHVRE 234
Query: 589 DILSGQYGFPSPYWDDISEEAKELISHMLESNPDLRF 625
D + PS + +S + ++ L NP+ R+
Sbjct: 235 DPIP-----PSARHEGLSADLDAVVLKALAKNPENRY 266
>pdb|3C4C|A Chain A, B-Raf Kinase In Complex With Plx4720
pdb|3C4C|B Chain B, B-Raf Kinase In Complex With Plx4720
Length = 280
Score = 95.5 bits (236), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 66/224 (29%), Positives = 116/224 (51%), Gaps = 19/224 (8%)
Query: 380 SVGQIIGDGNFAVVRQVYDKHKDMDCALKIIDKSKLLGKK-QMIENEVNILRSVNHPNII 438
+VGQ IG G+F V Y D A+K+++ + ++ Q +NEV +LR H NI+
Sbjct: 15 TVGQRIGSGSFGTV---YKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNIL 71
Query: 439 KLLDEYDTNNELYLVIELIKGGDLFDAI-SKNVKFSEEDSKFMTQSLASALSYLHDNYIV 497
L Y T +L +V + +G L+ + + KF + + + A + YLH I+
Sbjct: 72 -LFMGYSTKPQLAIVTQWCEGSSLYHHLHASETKFEMKKLIDIARQTARGMDYLHAKSII 130
Query: 498 HRDIKPENLLVEMSGCHVKVLKVGDFGLAQRVLR-----PMFTVCGTPTYVAPEIL---N 549
HRD+K N+ + +K+GDFGLA R + G+ ++APE++ +
Sbjct: 131 HRDLKSNNIFLHED----NTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQD 186
Query: 550 ESGYGVKIDVWAAGVILYILLCGFPPFVSDTNDQDELFDDILSG 593
+ Y + DV+A G++LY L+ G P+ S+ N++D++ + + G
Sbjct: 187 SNPYSFQSDVYAFGIVLYELMTGQLPY-SNINNRDQIIEMVGRG 229
>pdb|1PME|A Chain A, Structure Of Penta Mutant Human Erk2 Map Kinase Complexed
With A Specific Inhibitor Of Human P38 Map Kinase
Length = 380
Score = 95.5 bits (236), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 87/299 (29%), Positives = 131/299 (43%), Gaps = 45/299 (15%)
Query: 378 RYSVGQIIGDGNFAVVRQVYDKHKDMDCALKIIDKSKLLGKKQMIENEVNILRSVNHPNI 437
RY+ IG+G + +V YD + A+K I + Q E+ IL H NI
Sbjct: 44 RYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENI 103
Query: 438 IKLLD-----EYDTNNELYLVIELIKGGDLFDAISKNVKFSEEDSKFMTQSLASALSYLH 492
I + D + ++YLV L+ G DL+ + K S + + + L Y+H
Sbjct: 104 IGINDIIRAPTIEQMKDVYLVTHLM-GADLYKLL-KTQHLSNDHICYFLYQILRGLKYIH 161
Query: 493 DNYIVHRDIKPENLLVEMSGCHVKVLKVGDFGLAQRVLRP-------MFTVCGTPTYVAP 545
++HRD+KP NLL+ + LK+ DFGLA RV P + T Y AP
Sbjct: 162 SANVLHRDLKPSNLLLNTT----XDLKICDFGLA-RVADPDHDHTGFLTEYVATRWYRAP 216
Query: 546 EI-LNESGYGVKIDVWAAGVILYILLCGFPPF--------------VSDTNDQDEL--FD 588
EI LN GY ID+W+ G IL +L P F + + Q++L
Sbjct: 217 EIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCII 276
Query: 589 DILSGQYGFPSPY-----WDDI----SEEAKELISHMLESNPDLRFSAEDVLDHPWLER 638
++ + Y P+ W+ + +A +L+ ML NP R E L HP+LE+
Sbjct: 277 NLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHPYLEQ 335
>pdb|1ZY4|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY4|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY5|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp.
pdb|1ZY5|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp
Length = 303
Score = 95.1 bits (235), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 76/286 (26%), Positives = 136/286 (47%), Gaps = 44/286 (15%)
Query: 384 IIGDGNFAVVRQVYDKHKDMDCALKIIDKSKLLGKK-QMIENEVNILRSVNHP------- 435
++G G F QV +D I K + +K I +EV +L S+NH
Sbjct: 13 VLGQGAFG---QVVKARNALDSRYYAIKKIRHTEEKLSTILSEVMLLASLNHQYVVRYYA 69
Query: 436 ------NIIKLLDEYDTNNELYLVIELIKGGDLFDAI-SKNVKFSEEDSKFMTQSLASAL 488
N +K + + L++ +E + G L+D I S+N+ ++ + + + AL
Sbjct: 70 AWLERRNFVKPMTAVKKKSTLFIQMEYCENGTLYDLIHSENLNQQRDEYWRLFRQILEAL 129
Query: 489 SYLHDNYIVHRDIKPENLLVEMSGCHVKVLKVGDFGLAQRVLRP---------------- 532
SY+H I+HRD+KP N+ ++ S + +K+GDFGLA+ V R
Sbjct: 130 SYIHSQGIIHRDLKPMNIFIDES----RNVKIGDFGLAKNVHRSLDILKLDSQNLPGSSD 185
Query: 533 -MFTVCGTPTYVAPEILNESG-YGVKIDVWAAGVILYILLCGFPPFVSDTNDQDELFDDI 590
+ + GT YVA E+L+ +G Y KID+++ G+I + ++ F + N + +
Sbjct: 186 NLTSAIGTAMYVATEVLDGTGHYNEKIDMYSLGIIFFEMIYPFSTGMERVN----ILKKL 241
Query: 591 LSGQYGFPSPYWDDISEEAKELISHMLESNPDLRFSAEDVLDHPWL 636
S FP + D+ + K++I +++ +P+ R A +L+ WL
Sbjct: 242 RSVSIEFPPDFDDNKMKVEKKIIRLLIDHDPNKRPGARTLLNSGWL 287
>pdb|2FSO|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a)
Activating Mutant
Length = 367
Score = 95.1 bits (235), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 71/225 (31%), Positives = 112/225 (49%), Gaps = 19/225 (8%)
Query: 362 TIKRRENLNIPSKLLQRYSVGQIIGDGNFAVVRQVYDKHKDMDCALKIIDK--SKLLGKK 419
T R+E ++ +RY +G G + V +D + A+K + + ++ K
Sbjct: 14 TFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAK 73
Query: 420 QMIENEVNILRSVNHPNIIKLLDEY------DTNNELYLVIELIKGGDLFDAISKNVKFS 473
+ E+ +L+ + H N+I LLD + + N++YLV L+ G DL + I K K +
Sbjct: 74 RTYR-ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLM-GADL-NNIVKCQKLT 130
Query: 474 EEDSKFMTQSLASALSYLHDNYIVHRDIKPENLLVEMSGCHVKVLKVGDFGLAQRVLRPM 533
++ +F+ + L Y+H I+HRD+KP NL V C +K+L DFGLA+ M
Sbjct: 131 DDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVN-EDCELKIL---DFGLARHTADEM 186
Query: 534 FTVCGTPTYVAPEI-LNESGYGVKIDVWAAGVILYILLCG---FP 574
T Y APEI LN Y +D+W+ G I+ LL G FP
Sbjct: 187 TGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFP 231
>pdb|2FST|X Chain X, Mitogen Activated Protein Kinase P38alpha (d176a+f327l)
Activating Mutant
Length = 367
Score = 94.7 bits (234), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 68/210 (32%), Positives = 106/210 (50%), Gaps = 19/210 (9%)
Query: 377 QRYSVGQIIGDGNFAVVRQVYDKHKDMDCALKIIDK--SKLLGKKQMIENEVNILRSVNH 434
+RY +G G + V +D + A+K + + ++ K+ E+ +L+ + H
Sbjct: 29 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKH 87
Query: 435 PNIIKLLDEY------DTNNELYLVIELIKGGDLFDAISKNVKFSEEDSKFMTQSLASAL 488
N+I LLD + + N++YLV L+ G DL + I K K +++ +F+ + L
Sbjct: 88 ENVIGLLDVFTPARSLEEFNDVYLVTHLM-GADL-NNIVKCQKLTDDHVQFLIYQILRGL 145
Query: 489 SYLHDNYIVHRDIKPENLLVEMSGCHVKVLKVGDFGLAQRVLRPMFTVCGTPTYVAPEI- 547
Y+H I+HRD+KP NL V C +K+L DFGLA+ M T Y APEI
Sbjct: 146 KYIHSADIIHRDLKPSNLAVN-EDCELKIL---DFGLARHTADEMTGYVATRWYRAPEIM 201
Query: 548 LNESGYGVKIDVWAAGVILYILLCG---FP 574
LN Y +D+W+ G I+ LL G FP
Sbjct: 202 LNWMHYNQTVDIWSVGCIMAELLTGRTLFP 231
>pdb|3FI4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro4499
pdb|3FKO|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3668
pdb|3FLN|C Chain C, P38 Kinase Crystal Structure In Complex With R1487
Length = 372
Score = 94.7 bits (234), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 72/225 (32%), Positives = 112/225 (49%), Gaps = 19/225 (8%)
Query: 362 TIKRRENLNIPSKLLQRYSVGQIIGDGNFAVVRQVYDKHKDMDCALKIIDK--SKLLGKK 419
T R+E ++ +RY +G G + V +D + A+K + K ++ K
Sbjct: 19 TFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSKPFQSIIHAK 78
Query: 420 QMIENEVNILRSVNHPNIIKLLDEY------DTNNELYLVIELIKGGDLFDAISKNVKFS 473
+ E+ +L+ + H N+I LLD + + N++YLV L+ G DL + I K K +
Sbjct: 79 RTYR-ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLM-GADL-NNIVKCQKLT 135
Query: 474 EEDSKFMTQSLASALSYLHDNYIVHRDIKPENLLVEMSGCHVKVLKVGDFGLAQRVLRPM 533
++ +F+ + L Y+H I+HRD+KP NL V C +K+L DFGLA+ M
Sbjct: 136 DDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVN-EDCELKIL---DFGLARHTDDEM 191
Query: 534 FTVCGTPTYVAPEI-LNESGYGVKIDVWAAGVILYILLCG---FP 574
T Y APEI LN Y +D+W+ G I+ LL G FP
Sbjct: 192 TGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFP 236
>pdb|1BI8|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI8|C Chain C, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI7|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structure Of The Cdk6-P16ink4a Tumor Suppressor
Complex
pdb|1BLX|A Chain A, P19ink4dCDK6 COMPLEX
pdb|1G3N|A Chain A, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
pdb|1G3N|E Chain E, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
Length = 326
Score = 94.7 bits (234), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 89/296 (30%), Positives = 132/296 (44%), Gaps = 40/296 (13%)
Query: 377 QRYSVGQIIGDGNFAVVRQVYD-KHKDMDCALKIID-KSKLLGKKQMIENEVNILR---S 431
Q+Y IG+G + V + D K+ ALK + ++ G EV +LR +
Sbjct: 11 QQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLET 70
Query: 432 VNHPNIIKLLD-----EYDTNNELYLVIELIKGGDLFDAISK--NVKFSEEDSKFMTQSL 484
HPN+++L D D +L LV E + DL + K E K M L
Sbjct: 71 FEHPNVVRLFDVCTVSRTDRETKLTLVFEHVDQ-DLTTYLDKVPEPGVPTETIKDMMFQL 129
Query: 485 ASALSYLHDNYIVHRDIKPENLLVEMSGCHVKVLKVGDFGLAQ--RVLRPMFTVCGTPTY 542
L +LH + +VHRD+KP+N+LV SG +K+ DFGLA+ + +V T Y
Sbjct: 130 LRGLDFLHSHRVVHRDLKPQNILVTSSG----QIKLADFGLARIYSFQMALTSVVVTLWY 185
Query: 543 VAPEILNESGYGVKIDVWAAGVILYILLCGFPPF--VSDTNDQDELFDDI-LSGQYGFP- 598
APE+L +S Y +D+W+ G I + P F SD + ++ D I L G+ +P
Sbjct: 186 RAPEVLLQSSYATPVDLWSVGCIFAEMFRRKPLFRGSSDVDQLGKILDVIGLPGEEDWPR 245
Query: 599 -----------------SPYWDDISEEAKELISHMLESNPDLRFSAEDVLDHPWLE 637
+ DI E K+L+ L NP R SA L HP+ +
Sbjct: 246 DVALPRQAFHSKSAQPIEKFVTDIDELGKDLLLKCLTFNPAKRISAYSALSHPYFQ 301
>pdb|2FSL|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-A
pdb|2FSM|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-B
Length = 367
Score = 94.7 bits (234), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 68/210 (32%), Positives = 106/210 (50%), Gaps = 19/210 (9%)
Query: 377 QRYSVGQIIGDGNFAVVRQVYDKHKDMDCALKIIDK--SKLLGKKQMIENEVNILRSVNH 434
+RY +G G + V +D + A+K + + ++ K+ E+ +L+ + H
Sbjct: 29 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKH 87
Query: 435 PNIIKLLDEY------DTNNELYLVIELIKGGDLFDAISKNVKFSEEDSKFMTQSLASAL 488
N+I LLD + + N++YLV L+ G DL + I K K +++ +F+ + L
Sbjct: 88 ENVIGLLDVFTPARSLEEFNDVYLVTHLM-GADL-NNIVKCQKLTDDHVQFLIYQILRGL 145
Query: 489 SYLHDNYIVHRDIKPENLLVEMSGCHVKVLKVGDFGLAQRVLRPMFTVCGTPTYVAPEI- 547
Y+H I+HRD+KP NL V C +K+L DFGLA+ M T Y APEI
Sbjct: 146 KYIHSADIIHRDLKPSNLAVN-EDCELKIL---DFGLARHTADEMTGYVATRWYRAPEIM 201
Query: 548 LNESGYGVKIDVWAAGVILYILLCG---FP 574
LN Y +D+W+ G I+ LL G FP
Sbjct: 202 LNWMHYNQTVDIWSVGCIMAELLTGRTLFP 231
>pdb|1V0O|A Chain A, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
pdb|1V0O|B Chain B, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
Length = 288
Score = 94.7 bits (234), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 82/298 (27%), Positives = 138/298 (46%), Gaps = 45/298 (15%)
Query: 376 LQRYSVGQIIGDGNFAVVRQVYDKHKDMDCALKIIDKSKLLGKKQMIENEVNILRSVNHP 435
+++Y + IG+G + VV + + + + KI + + G E++IL+ + H
Sbjct: 1 MEKYHGLEKIGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHS 60
Query: 436 NIIKLLDEYDTNNELYLVIELIKG--GDLFDAISKNVKFSEEDSKFMTQSLASALSYLHD 493
NI+KL D T L LV E + L D ++ S F+ Q L + ++Y HD
Sbjct: 61 NIVKLYDVIHTKKRLVLVFEHLDQDLKKLLDVCEGGLE-SVTAKSFLLQ-LLNGIAYCHD 118
Query: 494 NYIVHRDIKPENLLVEMSGCHVKVLKVGDFGLAQRVLRPMFTVCG---TPTYVAPEILNE 550
++HRD+KP+NLL+ G LK+ DFGLA+ P+ T Y AP++L
Sbjct: 119 RRVLHRDLKPQNLLINREG----ELKIADFGLARAFGIPVRKYTHEVVTLWYRAPDVLMG 174
Query: 551 S-GYGVKIDVWAAGVILYILLCGFP--PFVSDTNDQDELFDDILSGQYGFP-SPYWDDIS 606
S Y ID+W+ G I ++ G P P VS+ + +F + G P S W +++
Sbjct: 175 SKKYSTTIDIWSVGCIFAEMVNGTPLFPGVSEADQLMRIFRIL-----GTPNSKNWPNVT 229
Query: 607 EEAK-------------------------ELISHMLESNPDLRFSAEDVLDHPWLERS 639
E K +L+S ML+ +P+ R +A+ L+H + + +
Sbjct: 230 ELPKYDPNFTVYEPLPWESFLKGLDESGIDLLSKMLKLDPNQRITAKQALEHAYFKEN 287
>pdb|1OB3|A Chain A, Structure Of P. Falciparum Pfpk5
pdb|1OB3|B Chain B, Structure Of P. Falciparum Pfpk5
pdb|1V0P|A Chain A, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
pdb|1V0P|B Chain B, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
Length = 288
Score = 94.7 bits (234), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 82/298 (27%), Positives = 138/298 (46%), Gaps = 45/298 (15%)
Query: 376 LQRYSVGQIIGDGNFAVVRQVYDKHKDMDCALKIIDKSKLLGKKQMIENEVNILRSVNHP 435
+++Y + IG+G + VV + + + + KI + + G E++IL+ + H
Sbjct: 1 MEKYHGLEKIGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHS 60
Query: 436 NIIKLLDEYDTNNELYLVIELIKG--GDLFDAISKNVKFSEEDSKFMTQSLASALSYLHD 493
NI+KL D T L LV E + L D ++ S F+ Q L + ++Y HD
Sbjct: 61 NIVKLYDVIHTKKRLVLVFEHLDQDLKKLLDVCEGGLE-SVTAKSFLLQ-LLNGIAYCHD 118
Query: 494 NYIVHRDIKPENLLVEMSGCHVKVLKVGDFGLAQRVLRPMFTVCG---TPTYVAPEILNE 550
++HRD+KP+NLL+ G LK+ DFGLA+ P+ T Y AP++L
Sbjct: 119 RRVLHRDLKPQNLLINREG----ELKIADFGLARAFGIPVRKYTHEIVTLWYRAPDVLMG 174
Query: 551 S-GYGVKIDVWAAGVILYILLCGFP--PFVSDTNDQDELFDDILSGQYGFP-SPYWDDIS 606
S Y ID+W+ G I ++ G P P VS+ + +F + G P S W +++
Sbjct: 175 SKKYSTTIDIWSVGCIFAEMVNGTPLFPGVSEADQLMRIFRIL-----GTPNSKNWPNVT 229
Query: 607 EEAK-------------------------ELISHMLESNPDLRFSAEDVLDHPWLERS 639
E K +L+S ML+ +P+ R +A+ L+H + + +
Sbjct: 230 ELPKYDPNFTVYEPLPWESFLKGLDESGIDLLSKMLKLDPNQRITAKQALEHAYFKEN 287
>pdb|1V0B|A Chain A, Crystal Structure Of The T198a Mutant Of Pfpk5
pdb|1V0B|B Chain B, Crystal Structure Of The T198a Mutant Of Pfpk5
Length = 288
Score = 94.7 bits (234), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 82/298 (27%), Positives = 138/298 (46%), Gaps = 45/298 (15%)
Query: 376 LQRYSVGQIIGDGNFAVVRQVYDKHKDMDCALKIIDKSKLLGKKQMIENEVNILRSVNHP 435
+++Y + IG+G + VV + + + + KI + + G E++IL+ + H
Sbjct: 1 MEKYHGLEKIGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHS 60
Query: 436 NIIKLLDEYDTNNELYLVIELIKG--GDLFDAISKNVKFSEEDSKFMTQSLASALSYLHD 493
NI+KL D T L LV E + L D ++ S F+ Q L + ++Y HD
Sbjct: 61 NIVKLYDVIHTKKRLVLVFEHLDQDLKKLLDVCEGGLE-SVTAKSFLLQ-LLNGIAYCHD 118
Query: 494 NYIVHRDIKPENLLVEMSGCHVKVLKVGDFGLAQRVLRPMFTVCG---TPTYVAPEILNE 550
++HRD+KP+NLL+ G LK+ DFGLA+ P+ T Y AP++L
Sbjct: 119 RRVLHRDLKPQNLLINREG----ELKIADFGLARAFGIPVRKYTHEVVTLWYRAPDVLMG 174
Query: 551 S-GYGVKIDVWAAGVILYILLCGFP--PFVSDTNDQDELFDDILSGQYGFP-SPYWDDIS 606
S Y ID+W+ G I ++ G P P VS+ + +F + G P S W +++
Sbjct: 175 SKKYSTTIDIWSVGCIFAEMVNGAPLFPGVSEADQLMRIFRIL-----GTPNSKNWPNVT 229
Query: 607 EEAK-------------------------ELISHMLESNPDLRFSAEDVLDHPWLERS 639
E K +L+S ML+ +P+ R +A+ L+H + + +
Sbjct: 230 ELPKYDPNFTVYEPLPWESFLKGLDESGIDLLSKMLKLDPNQRITAKQALEHAYFKEN 287
>pdb|3D7Z|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
Length = 360
Score = 94.4 bits (233), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 67/209 (32%), Positives = 105/209 (50%), Gaps = 17/209 (8%)
Query: 377 QRYSVGQIIGDGNFAVVRQVYDKHKDMDCALKIIDKS-KLLGKKQMIENEVNILRSVNHP 435
+RY +G G + V +D + A+K + + + + + E+ +L+ + H
Sbjct: 22 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE 81
Query: 436 NIIKLLDEY------DTNNELYLVIELIKGGDLFDAISKNVKFSEEDSKFMTQSLASALS 489
N+I LLD + + N++YLV L+ G DL + I K K +++ +F+ + L
Sbjct: 82 NVIGLLDVFTPARSLEEFNDVYLVTHLM-GADL-NNIVKXQKLTDDHVQFLIYQILRGLK 139
Query: 490 YLHDNYIVHRDIKPENLLVEMSGCHVKVLKVGDFGLAQRVLRPMFTVCGTPTYVAPEI-L 548
Y+H I+HRD+KP NL V C +K+L DFGLA+ M T Y APEI L
Sbjct: 140 YIHSADIIHRDLKPSNLAVN-EDCELKIL---DFGLARHTDDEMTGYVATRWYRAPEIML 195
Query: 549 NESGYGVKIDVWAAGVILYILLCG---FP 574
N Y +D+W+ G I+ LL G FP
Sbjct: 196 NWMHYNQTVDIWSVGCIMAELLTGRTLFP 224
>pdb|3GC9|A Chain A, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
pdb|3GC9|B Chain B, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
Length = 370
Score = 94.4 bits (233), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 76/235 (32%), Positives = 115/235 (48%), Gaps = 23/235 (9%)
Query: 377 QRYSVGQIIGDGNFAVVRQVYDKHKDMDCALKIIDKS-KLLGKKQMIENEVNILRSVNHP 435
QR + +G G + V YD A+K + + + L + E+ +L+ + H
Sbjct: 28 QRLQGLRPVGSGAYGSVCSAYDARLRQKVAVKKLSRPFQSLIHARRTYRELRLLKHLKHE 87
Query: 436 NIIKLLDEY------DTNNELYLVIELIKGGDLFDAISKNVKFSEEDSKFMTQSLASALS 489
N+I LLD + + +E+YLV L+ G DL + I K+ S+E +F+ L L
Sbjct: 88 NVIGLLDVFTPATSIEDFSEVYLVTTLM-GADL-NNIVKSQALSDEHVQFLVYQLLRGLK 145
Query: 490 YLHDNYIVHRDIKPENLLVEMSGCHVKVLKVGDFGLAQRVLRPMFTVCGTPTYVAPEI-L 548
Y+H I+HRD+KP N+ V L++ DFGLA++ M T Y APEI L
Sbjct: 146 YIHSAGIIHRDLKPSNVAVNEDS----ELRILDFGLARQADEEMTGYVATRWYRAPEIML 201
Query: 549 NESGYGVKIDVWAAGVILYILLCG---FPPFVSDTNDQDELFDDILSGQYGFPSP 600
N Y +D+W+ G I+ LL G FP SD DQ + +++ G PSP
Sbjct: 202 NWMHYNQTVDIWSVGCIMAELLQGKALFPG--SDYIDQLKRIMEVV----GTPSP 250
>pdb|1JOW|B Chain B, Crystal Structure Of A Complex Of Human Cdk6 And A Viral
Cyclin
pdb|1XO2|B Chain B, Crystal Structure Of A Human Cyclin-Dependent Kinase 6
Complex With A Flavonol Inhibitor, Fisetin
pdb|2EUF|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclin In Complex With The
Inhibitor Pd0332991
pdb|2F2C|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclinwith The Inhibitor
Aminopurvalanol
Length = 308
Score = 94.4 bits (233), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 89/296 (30%), Positives = 132/296 (44%), Gaps = 40/296 (13%)
Query: 377 QRYSVGQIIGDGNFAVVRQVYD-KHKDMDCALKIID-KSKLLGKKQMIENEVNILR---S 431
Q+Y IG+G + V + D K+ ALK + ++ G EV +LR +
Sbjct: 11 QQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLET 70
Query: 432 VNHPNIIKLLD-----EYDTNNELYLVIELIKGGDLFDAISK--NVKFSEEDSKFMTQSL 484
HPN+++L D D +L LV E + DL + K E K M L
Sbjct: 71 FEHPNVVRLFDVCTVSRTDRETKLTLVFEHVDQ-DLTTYLDKVPEPGVPTETIKDMMFQL 129
Query: 485 ASALSYLHDNYIVHRDIKPENLLVEMSGCHVKVLKVGDFGLAQ--RVLRPMFTVCGTPTY 542
L +LH + +VHRD+KP+N+LV SG +K+ DFGLA+ + +V T Y
Sbjct: 130 LRGLDFLHSHRVVHRDLKPQNILVTSSG----QIKLADFGLARIYSFQMALTSVVVTLWY 185
Query: 543 VAPEILNESGYGVKIDVWAAGVILYILLCGFPPF--VSDTNDQDELFDDI-LSGQYGFP- 598
APE+L +S Y +D+W+ G I + P F SD + ++ D I L G+ +P
Sbjct: 186 RAPEVLLQSSYATPVDLWSVGCIFAEMFRRKPLFRGSSDVDQLGKILDVIGLPGEEDWPR 245
Query: 599 -----------------SPYWDDISEEAKELISHMLESNPDLRFSAEDVLDHPWLE 637
+ DI E K+L+ L NP R SA L HP+ +
Sbjct: 246 DVALPRQAFHSKSAQPIEKFVTDIDELGKDLLLKCLTFNPAKRISAYSALSHPYFQ 301
>pdb|4E5A|X Chain X, The W197a Mutant Of P38a Map Kinase
Length = 360
Score = 94.4 bits (233), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 68/210 (32%), Positives = 106/210 (50%), Gaps = 19/210 (9%)
Query: 377 QRYSVGQIIGDGNFAVVRQVYDKHKDMDCALKIIDK--SKLLGKKQMIENEVNILRSVNH 434
+RY +G G + V +D + A+K + + ++ K+ E+ +L+ + H
Sbjct: 22 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKH 80
Query: 435 PNIIKLLDEY------DTNNELYLVIELIKGGDLFDAISKNVKFSEEDSKFMTQSLASAL 488
N+I LLD + + N++YLV L+ G DL + I K K +++ +F+ + L
Sbjct: 81 ENVIGLLDVFTPARSLEEFNDVYLVTHLM-GADL-NNIVKCQKLTDDHVQFLIYQILRGL 138
Query: 489 SYLHDNYIVHRDIKPENLLVEMSGCHVKVLKVGDFGLAQRVLRPMFTVCGTPTYVAPEI- 547
Y+H I+HRD+KP NL V C +K+L DFGLA+ M T Y APEI
Sbjct: 139 KYIHSADIIHRDLKPSNLAVN-EDCELKIL---DFGLARHTDDEMTGYVATRWYRAPEIM 194
Query: 548 LNESGYGVKIDVWAAGVILYILLCG---FP 574
LN Y +D+W+ G I+ LL G FP
Sbjct: 195 LNAMHYNQTVDIWSVGCIMAELLTGRTLFP 224
>pdb|4EWQ|A Chain A, Human P38 Alpha Mapk In Complex With A Pyridazine Based
Inhibitor
Length = 383
Score = 94.4 bits (233), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 71/225 (31%), Positives = 112/225 (49%), Gaps = 19/225 (8%)
Query: 362 TIKRRENLNIPSKLLQRYSVGQIIGDGNFAVVRQVYDKHKDMDCALKIIDK--SKLLGKK 419
T R+E ++ +RY +G G + V +D + A+K + + ++ K
Sbjct: 30 TFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAK 89
Query: 420 QMIENEVNILRSVNHPNIIKLLDEY------DTNNELYLVIELIKGGDLFDAISKNVKFS 473
+ E+ +L+ + H N+I LLD + + N++YLV L+ G DL + I K K +
Sbjct: 90 RTYR-ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLM-GADL-NNIVKCQKLT 146
Query: 474 EEDSKFMTQSLASALSYLHDNYIVHRDIKPENLLVEMSGCHVKVLKVGDFGLAQRVLRPM 533
++ +F+ + L Y+H I+HRD+KP NL V C +K+L DFGLA+ M
Sbjct: 147 DDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVN-EDCELKIL---DFGLARHTDDEM 202
Query: 534 FTVCGTPTYVAPEI-LNESGYGVKIDVWAAGVILYILLCG---FP 574
T Y APEI LN Y +D+W+ G I+ LL G FP
Sbjct: 203 XGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFP 247
>pdb|2PUU|A Chain A, Crystal Structure Of P38 Complex With 1-(5-Tert-Butyl-2-P-
Tolyl-2h-Pyrazol-3-Yl)-3-[4-(6-Morpholin-4-Ylmethyl-
Pyridin-3-Yl)naphthalen-1-Yl]urea
pdb|3CTQ|A Chain A, Structure Of Map Kinase P38 In Complex With A
1-O-Tolyl-1,2, 3-Triazole-4-Carboxamide
Length = 348
Score = 94.0 bits (232), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 70/224 (31%), Positives = 110/224 (49%), Gaps = 17/224 (7%)
Query: 362 TIKRRENLNIPSKLLQRYSVGQIIGDGNFAVVRQVYDKHKDMDCALKIIDKS-KLLGKKQ 420
T R+E ++ +RY +G G + V +D A+K + + + + +
Sbjct: 3 TFYRQELAKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAK 62
Query: 421 MIENEVNILRSVNHPNIIKLLDEY------DTNNELYLVIELIKGGDLFDAISKNVKFSE 474
E+ +L+ + H N+I LLD + + N++YLV L+ G DL + I K K ++
Sbjct: 63 RTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLM-GADL-NNIVKCAKLTD 120
Query: 475 EDSKFMTQSLASALSYLHDNYIVHRDIKPENLLVEMSGCHVKVLKVGDFGLAQRVLRPMF 534
+ +F+ + L Y+H I+HRD+KP NL V C +K+L DFGLA+ M
Sbjct: 121 DHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVN-EDCELKIL---DFGLARHTDDEMT 176
Query: 535 TVCGTPTYVAPEI-LNESGYGVKIDVWAAGVILYILLCG---FP 574
T Y APEI LN Y +D+W+ G I+ LL G FP
Sbjct: 177 GYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFP 220
>pdb|3NUP|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|3NUX|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|4AUA|A Chain A, Liganded X-ray Crystal Structure Of Cyclin Dependent
Kinase 6 (cdk6)
pdb|4EZ5|A Chain A, Cdk6 (monomeric) In Complex With Inhibitor
Length = 307
Score = 94.0 bits (232), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 89/296 (30%), Positives = 132/296 (44%), Gaps = 40/296 (13%)
Query: 377 QRYSVGQIIGDGNFAVVRQVYD-KHKDMDCALKIID-KSKLLGKKQMIENEVNILR---S 431
Q+Y IG+G + V + D K+ ALK + ++ G EV +LR +
Sbjct: 11 QQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLET 70
Query: 432 VNHPNIIKLLD-----EYDTNNELYLVIELIKGGDLFDAISK--NVKFSEEDSKFMTQSL 484
HPN+++L D D +L LV E + DL + K E K M L
Sbjct: 71 FEHPNVVRLFDVCTVSRTDRETKLTLVFEHVDQ-DLTTYLDKVPEPGVPTETIKDMMFQL 129
Query: 485 ASALSYLHDNYIVHRDIKPENLLVEMSGCHVKVLKVGDFGLAQ--RVLRPMFTVCGTPTY 542
L +LH + +VHRD+KP+N+LV SG +K+ DFGLA+ + +V T Y
Sbjct: 130 LRGLDFLHSHRVVHRDLKPQNILVTSSG----QIKLADFGLARIYSFQMALTSVVVTLWY 185
Query: 543 VAPEILNESGYGVKIDVWAAGVILYILLCGFPPF--VSDTNDQDELFDDI-LSGQYGFP- 598
APE+L +S Y +D+W+ G I + P F SD + ++ D I L G+ +P
Sbjct: 186 RAPEVLLQSSYATPVDLWSVGCIFAEMFRRKPLFRGSSDVDQLGKILDVIGLPGEEDWPR 245
Query: 599 -----------------SPYWDDISEEAKELISHMLESNPDLRFSAEDVLDHPWLE 637
+ DI E K+L+ L NP R SA L HP+ +
Sbjct: 246 DVALPRQAFHSKSAQPIEKFVTDIDELGKDLLLKCLTFNPAKRISAYSALSHPYFQ 301
>pdb|3ZSG|A Chain A, X-Ray Structure Of P38alpha Bound To Tak-715
pdb|3ZSH|A Chain A, X-Ray Structure Of P38alpha Bound To Scio-469
pdb|3ZSI|A Chain A, X-Ray Structure Of P38alpha Bound To Vx-745
pdb|3ZS5|A Chain A, Structural Basis For Kinase Selectivity Of Three Clinical
P38alpha Inhibitors
Length = 362
Score = 94.0 bits (232), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 71/225 (31%), Positives = 112/225 (49%), Gaps = 19/225 (8%)
Query: 362 TIKRRENLNIPSKLLQRYSVGQIIGDGNFAVVRQVYDKHKDMDCALKIIDK--SKLLGKK 419
T R+E ++ +RY +G G + V +D + A+K + + ++ K
Sbjct: 9 TFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAK 68
Query: 420 QMIENEVNILRSVNHPNIIKLLDEY------DTNNELYLVIELIKGGDLFDAISKNVKFS 473
+ E+ +L+ + H N+I LLD + + N++YLV L+ G DL + I K K +
Sbjct: 69 RTYR-ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLM-GADL-NNIVKCQKLT 125
Query: 474 EEDSKFMTQSLASALSYLHDNYIVHRDIKPENLLVEMSGCHVKVLKVGDFGLAQRVLRPM 533
++ +F+ + L Y+H I+HRD+KP NL V C +K+L DFGLA+ M
Sbjct: 126 DDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVN-EDCELKIL---DFGLARHTDDEM 181
Query: 534 FTVCGTPTYVAPEI-LNESGYGVKIDVWAAGVILYILLCG---FP 574
T Y APEI LN Y +D+W+ G I+ LL G FP
Sbjct: 182 TGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFP 226
>pdb|3ODZ|X Chain X, Crystal Structure Of P38alpha Y323r Active Mutant
Length = 360
Score = 94.0 bits (232), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 68/210 (32%), Positives = 106/210 (50%), Gaps = 19/210 (9%)
Query: 377 QRYSVGQIIGDGNFAVVRQVYDKHKDMDCALKIIDK--SKLLGKKQMIENEVNILRSVNH 434
+RY +G G + V +D + A+K + + ++ K+ E+ +L+ + H
Sbjct: 22 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKH 80
Query: 435 PNIIKLLDEY------DTNNELYLVIELIKGGDLFDAISKNVKFSEEDSKFMTQSLASAL 488
N+I LLD + + N++YLV L+ G DL + I K K +++ +F+ + L
Sbjct: 81 ENVIGLLDVFTPARSLEEFNDVYLVTHLM-GADL-NNIVKCQKLTDDHVQFLIYQILRGL 138
Query: 489 SYLHDNYIVHRDIKPENLLVEMSGCHVKVLKVGDFGLAQRVLRPMFTVCGTPTYVAPEI- 547
Y+H I+HRD+KP NL V C +K+L DFGLA+ M T Y APEI
Sbjct: 139 KYIHSADIIHRDLKPSNLAVN-EDCELKIL---DFGLARHTDDEMTGYVATRWYRAPEIM 194
Query: 548 LNESGYGVKIDVWAAGVILYILLCG---FP 574
LN Y +D+W+ G I+ LL G FP
Sbjct: 195 LNWMHYNQTVDIWSVGCIMAELLTGRTLFP 224
>pdb|3OEF|X Chain X, Crystal Structure Of Y323f Inactive Mutant Of P38alpha Map
Kinase
Length = 360
Score = 94.0 bits (232), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 71/225 (31%), Positives = 112/225 (49%), Gaps = 19/225 (8%)
Query: 362 TIKRRENLNIPSKLLQRYSVGQIIGDGNFAVVRQVYDKHKDMDCALKIIDK--SKLLGKK 419
T R+E ++ +RY +G G + V +D + A+K + + ++ K
Sbjct: 7 TFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAK 66
Query: 420 QMIENEVNILRSVNHPNIIKLLDEY------DTNNELYLVIELIKGGDLFDAISKNVKFS 473
+ E+ +L+ + H N+I LLD + + N++YLV L+ G DL + I K K +
Sbjct: 67 RTYR-ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLM-GADL-NNIVKCQKLT 123
Query: 474 EEDSKFMTQSLASALSYLHDNYIVHRDIKPENLLVEMSGCHVKVLKVGDFGLAQRVLRPM 533
++ +F+ + L Y+H I+HRD+KP NL V C +K+L DFGLA+ M
Sbjct: 124 DDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVN-EDCELKIL---DFGLARHTDDEM 179
Query: 534 FTVCGTPTYVAPEI-LNESGYGVKIDVWAAGVILYILLCG---FP 574
T Y APEI LN Y +D+W+ G I+ LL G FP
Sbjct: 180 TGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFP 224
>pdb|3OD6|X Chain X, Crystal Structure Of P38alpha Y323t Active Mutant
Length = 360
Score = 94.0 bits (232), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 68/210 (32%), Positives = 106/210 (50%), Gaps = 19/210 (9%)
Query: 377 QRYSVGQIIGDGNFAVVRQVYDKHKDMDCALKIIDK--SKLLGKKQMIENEVNILRSVNH 434
+RY +G G + V +D + A+K + + ++ K+ E+ +L+ + H
Sbjct: 22 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKH 80
Query: 435 PNIIKLLDEY------DTNNELYLVIELIKGGDLFDAISKNVKFSEEDSKFMTQSLASAL 488
N+I LLD + + N++YLV L+ G DL + I K K +++ +F+ + L
Sbjct: 81 ENVIGLLDVFTPARSLEEFNDVYLVTHLM-GADL-NNIVKCQKLTDDHVQFLIYQILRGL 138
Query: 489 SYLHDNYIVHRDIKPENLLVEMSGCHVKVLKVGDFGLAQRVLRPMFTVCGTPTYVAPEI- 547
Y+H I+HRD+KP NL V C +K+L DFGLA+ M T Y APEI
Sbjct: 139 KYIHSADIIHRDLKPSNLAVN-EDCELKIL---DFGLARHTDDEMTGYVATRWYRAPEIM 194
Query: 548 LNESGYGVKIDVWAAGVILYILLCG---FP 574
LN Y +D+W+ G I+ LL G FP
Sbjct: 195 LNWMHYNQTVDIWSVGCIMAELLTGRTLFP 224
>pdb|1DI9|A Chain A, The Structure Of P38 Mitogen-Activated Protein Kinase In
Complex With 4-[3-Methylsulfanylanilino]-6,7-
Dimethoxyquinazoline
pdb|1KV1|A Chain A, P38 Map Kinase In Complex With Inhibitor 1
pdb|1KV2|A Chain A, Human P38 Map Kinase In Complex With Birb 796
pdb|1WBO|A Chain A, Fragment Based P38 Inhibitors
pdb|1W7H|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W82|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W83|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W84|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1ZZ2|A Chain A, Two Classes Of P38alpha Map Kinase Inhibitors Having A
Common Diphenylether Core But Exhibiting Divergent
Binding Modes
pdb|1WBN|A Chain A, Fragment Based P38 Inhibitors
pdb|1WBS|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBT|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-based Lead Generation.
pdb|1WBV|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBW|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1ZYJ|A Chain A, Human P38 Map Kinase In Complex With Inhibitor 1a
pdb|2ZAZ|A Chain A, Crystal Structure Of P38 In Complex With 4-Anilino
Quinoline Inhibitor
pdb|2ZB0|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|2ZB1|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|3HL7|A Chain A, Crystal Structure Of Human P38alpha Complexed With Sd-0006
pdb|3HLL|A Chain A, Crystal Structure Of Human P38alpha Complexed With
Ph-797804
pdb|3HP2|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyridinone Compound
pdb|3HP5|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyrimidopyridazinone Compound
pdb|3KF7|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Triazolopyrimidine Compound
pdb|3MGY|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3ROC|A Chain A, Crystal Structure Of Human P38 Alpha Complexed With A
Pyrimidinone Compound
pdb|3RIN|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|4E5B|A Chain A, Structure Of P38a Map Kinase Without Bog
pdb|4E6A|A Chain A, P38a-Pia23 Complex
pdb|4E6C|A Chain A, P38a-perifosine Complex
pdb|4E8A|A Chain A, The Crystal Structure Of P38a Map Kinase In Complex With
Pia24
Length = 360
Score = 94.0 bits (232), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 71/225 (31%), Positives = 112/225 (49%), Gaps = 19/225 (8%)
Query: 362 TIKRRENLNIPSKLLQRYSVGQIIGDGNFAVVRQVYDKHKDMDCALKIIDK--SKLLGKK 419
T R+E ++ +RY +G G + V +D + A+K + + ++ K
Sbjct: 7 TFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAK 66
Query: 420 QMIENEVNILRSVNHPNIIKLLDEY------DTNNELYLVIELIKGGDLFDAISKNVKFS 473
+ E+ +L+ + H N+I LLD + + N++YLV L+ G DL + I K K +
Sbjct: 67 RTYR-ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLM-GADL-NNIVKCQKLT 123
Query: 474 EEDSKFMTQSLASALSYLHDNYIVHRDIKPENLLVEMSGCHVKVLKVGDFGLAQRVLRPM 533
++ +F+ + L Y+H I+HRD+KP NL V C +K+L DFGLA+ M
Sbjct: 124 DDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVN-EDCELKIL---DFGLARHTDDEM 179
Query: 534 FTVCGTPTYVAPEI-LNESGYGVKIDVWAAGVILYILLCG---FP 574
T Y APEI LN Y +D+W+ G I+ LL G FP
Sbjct: 180 TGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFP 224
>pdb|3ODY|X Chain X, Crystal Structure Of P38alpha Y323q Active Mutant
Length = 360
Score = 94.0 bits (232), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 68/210 (32%), Positives = 106/210 (50%), Gaps = 19/210 (9%)
Query: 377 QRYSVGQIIGDGNFAVVRQVYDKHKDMDCALKIIDK--SKLLGKKQMIENEVNILRSVNH 434
+RY +G G + V +D + A+K + + ++ K+ E+ +L+ + H
Sbjct: 22 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKH 80
Query: 435 PNIIKLLDEY------DTNNELYLVIELIKGGDLFDAISKNVKFSEEDSKFMTQSLASAL 488
N+I LLD + + N++YLV L+ G DL + I K K +++ +F+ + L
Sbjct: 81 ENVIGLLDVFTPARSLEEFNDVYLVTHLM-GADL-NNIVKCQKLTDDHVQFLIYQILRGL 138
Query: 489 SYLHDNYIVHRDIKPENLLVEMSGCHVKVLKVGDFGLAQRVLRPMFTVCGTPTYVAPEI- 547
Y+H I+HRD+KP NL V C +K+L DFGLA+ M T Y APEI
Sbjct: 139 KYIHSADIIHRDLKPSNLAVN-EDCELKIL---DFGLARHTDDEMTGYVATRWYRAPEIM 194
Query: 548 LNESGYGVKIDVWAAGVILYILLCG---FP 574
LN Y +D+W+ G I+ LL G FP
Sbjct: 195 LNWMHYNQTVDIWSVGCIMAELLTGRTLFP 224
>pdb|3NNX|A Chain A, Crystal Structure Of Phosphorylated P38 Alpha In Complex
With Dp802
Length = 354
Score = 94.0 bits (232), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 71/225 (31%), Positives = 112/225 (49%), Gaps = 19/225 (8%)
Query: 362 TIKRRENLNIPSKLLQRYSVGQIIGDGNFAVVRQVYDKHKDMDCALKIIDK--SKLLGKK 419
T R+E ++ +RY +G G + V +D + A+K + + ++ K
Sbjct: 7 TFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAK 66
Query: 420 QMIENEVNILRSVNHPNIIKLLDEY------DTNNELYLVIELIKGGDLFDAISKNVKFS 473
+ E+ +L+ + H N+I LLD + + N++YLV L+ G DL + I K K +
Sbjct: 67 RTYR-ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLM-GADL-NNIVKCQKLT 123
Query: 474 EEDSKFMTQSLASALSYLHDNYIVHRDIKPENLLVEMSGCHVKVLKVGDFGLAQRVLRPM 533
++ +F+ + L Y+H I+HRD+KP NL V C +K+L DFGLA+ M
Sbjct: 124 DDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVN-EDCELKIL---DFGLARHTDDEM 179
Query: 534 FTVCGTPTYVAPEI-LNESGYGVKIDVWAAGVILYILLCG---FP 574
T Y APEI LN Y +D+W+ G I+ LL G FP
Sbjct: 180 TGXVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFP 224
>pdb|3K3J|A Chain A, P38alpha Bound To Novel Dfg-Out Compound Pf-00416121
Length = 362
Score = 94.0 bits (232), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 70/224 (31%), Positives = 111/224 (49%), Gaps = 17/224 (7%)
Query: 362 TIKRRENLNIPSKLLQRYSVGQIIGDGNFAVVRQVYDKHKDMDCALKIIDKS-KLLGKKQ 420
T R+E ++ +RY +G G + V +D + A+K + + + + +
Sbjct: 9 TFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAK 68
Query: 421 MIENEVNILRSVNHPNIIKLLDEY------DTNNELYLVIELIKGGDLFDAISKNVKFSE 474
E+ +L+ + H N+I LLD + + N++YLV L+ G DL + I K K ++
Sbjct: 69 RTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLM-GADL-NNIVKCQKLTD 126
Query: 475 EDSKFMTQSLASALSYLHDNYIVHRDIKPENLLVEMSGCHVKVLKVGDFGLAQRVLRPMF 534
+ +F+ + L Y+H I+HRD+KP NL V C +K+L DFGLA+ M
Sbjct: 127 DHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVN-EDCELKIL---DFGLARHTDDEMT 182
Query: 535 TVCGTPTYVAPEI-LNESGYGVKIDVWAAGVILYILLCG---FP 574
T Y APEI LN Y +D+W+ G I+ LL G FP
Sbjct: 183 GYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFP 226
>pdb|2NPQ|A Chain A, A Novel Lipid Binding Site In The P38 Alpha Map Kinase
Length = 367
Score = 94.0 bits (232), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 71/225 (31%), Positives = 112/225 (49%), Gaps = 19/225 (8%)
Query: 362 TIKRRENLNIPSKLLQRYSVGQIIGDGNFAVVRQVYDKHKDMDCALKIIDK--SKLLGKK 419
T R+E ++ +RY +G G + V +D + A+K + + ++ K
Sbjct: 14 TFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAK 73
Query: 420 QMIENEVNILRSVNHPNIIKLLDEY------DTNNELYLVIELIKGGDLFDAISKNVKFS 473
+ E+ +L+ + H N+I LLD + + N++YLV L+ G DL + I K K +
Sbjct: 74 RTYR-ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLM-GADL-NNIVKCQKLT 130
Query: 474 EEDSKFMTQSLASALSYLHDNYIVHRDIKPENLLVEMSGCHVKVLKVGDFGLAQRVLRPM 533
++ +F+ + L Y+H I+HRD+KP NL V C +K+L DFGLA+ M
Sbjct: 131 DDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVN-EDCELKIL---DFGLARHTDDEM 186
Query: 534 FTVCGTPTYVAPEI-LNESGYGVKIDVWAAGVILYILLCG---FP 574
T Y APEI LN Y +D+W+ G I+ LL G FP
Sbjct: 187 TGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFP 231
>pdb|3HVC|A Chain A, Crystal Structure Of Human P38alpha Map Kinase
Length = 362
Score = 94.0 bits (232), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 70/224 (31%), Positives = 111/224 (49%), Gaps = 17/224 (7%)
Query: 362 TIKRRENLNIPSKLLQRYSVGQIIGDGNFAVVRQVYDKHKDMDCALKIIDKS-KLLGKKQ 420
T R+E ++ +RY +G G + V +D + A+K + + + + +
Sbjct: 9 TFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAK 68
Query: 421 MIENEVNILRSVNHPNIIKLLDEY------DTNNELYLVIELIKGGDLFDAISKNVKFSE 474
E+ +L+ + H N+I LLD + + N++YLV L+ G DL + I K K ++
Sbjct: 69 RTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLM-GADL-NNIVKCQKLTD 126
Query: 475 EDSKFMTQSLASALSYLHDNYIVHRDIKPENLLVEMSGCHVKVLKVGDFGLAQRVLRPMF 534
+ +F+ + L Y+H I+HRD+KP NL V C +K+L DFGLA+ M
Sbjct: 127 DHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVN-EDCELKIL---DFGLARHTDDEMT 182
Query: 535 TVCGTPTYVAPEI-LNESGYGVKIDVWAAGVILYILLCG---FP 574
T Y APEI LN Y +D+W+ G I+ LL G FP
Sbjct: 183 GYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFP 226
>pdb|2BAJ|A Chain A, P38alpha Bound To Pyrazolourea
pdb|2BAK|A Chain A, P38alpha Map Kinase Bound To Mpaq
pdb|4A9Y|A Chain A, P38alpha Map Kinase Bound To Cmpd 8
pdb|4AA0|A Chain A, P38alpha Map Kinase Bound To Cmpd 2
pdb|4AA4|A Chain A, P38alpha Map Kinase Bound To Cmpd 22
pdb|4AAC|A Chain A, P38alpha Map Kinase Bound To Cmpd 29
Length = 365
Score = 94.0 bits (232), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 71/225 (31%), Positives = 112/225 (49%), Gaps = 19/225 (8%)
Query: 362 TIKRRENLNIPSKLLQRYSVGQIIGDGNFAVVRQVYDKHKDMDCALKIIDK--SKLLGKK 419
T R+E ++ +RY +G G + V +D + A+K + + ++ K
Sbjct: 12 TFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAK 71
Query: 420 QMIENEVNILRSVNHPNIIKLLDEY------DTNNELYLVIELIKGGDLFDAISKNVKFS 473
+ E+ +L+ + H N+I LLD + + N++YLV L+ G DL + I K K +
Sbjct: 72 RTYR-ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLM-GADL-NNIVKCQKLT 128
Query: 474 EEDSKFMTQSLASALSYLHDNYIVHRDIKPENLLVEMSGCHVKVLKVGDFGLAQRVLRPM 533
++ +F+ + L Y+H I+HRD+KP NL V C +K+L DFGLA+ M
Sbjct: 129 DDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVN-EDCELKIL---DFGLARHTDDEM 184
Query: 534 FTVCGTPTYVAPEI-LNESGYGVKIDVWAAGVILYILLCG---FP 574
T Y APEI LN Y +D+W+ G I+ LL G FP
Sbjct: 185 TGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFP 229
>pdb|1IAN|A Chain A, Human P38 Map Kinase Inhibitor Complex
pdb|2QD9|A Chain A, P38 Alpha Map Kinase Inhibitor Based On Heterobicyclic
Scaffolds
pdb|2RG5|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11b
pdb|2RG6|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11j
pdb|3C5U|A Chain A, P38 Alpha Map Kinase Complexed With A Benzothiazole Based
Inhibitor
pdb|3BV2|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 30
pdb|3BV3|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 2
pdb|3BX5|A Chain A, P38 Alpha Map Kinase Complexed With Bms-640994
pdb|3L8X|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Pyrimidine
Based Inhibitor
pdb|3NWW|A Chain A, P38 Alpha Kinase Complexed With A
2-Aminothiazol-5-Yl-Pyrimidine Based Inhibitor
pdb|3MVL|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVL|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVM|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3MVM|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3OCG|A Chain A, P38 Alpha Kinase Complexed With A 5-Amino-Pyrazole Based
Inhibitor
pdb|3S4Q|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Triazine Based
Inhibitor
Length = 366
Score = 94.0 bits (232), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 71/225 (31%), Positives = 112/225 (49%), Gaps = 19/225 (8%)
Query: 362 TIKRRENLNIPSKLLQRYSVGQIIGDGNFAVVRQVYDKHKDMDCALKIIDK--SKLLGKK 419
T R+E ++ +RY +G G + V +D + A+K + + ++ K
Sbjct: 13 TFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAK 72
Query: 420 QMIENEVNILRSVNHPNIIKLLDEY------DTNNELYLVIELIKGGDLFDAISKNVKFS 473
+ E+ +L+ + H N+I LLD + + N++YLV L+ G DL + I K K +
Sbjct: 73 RTYR-ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLM-GADL-NNIVKCQKLT 129
Query: 474 EEDSKFMTQSLASALSYLHDNYIVHRDIKPENLLVEMSGCHVKVLKVGDFGLAQRVLRPM 533
++ +F+ + L Y+H I+HRD+KP NL V C +K+L DFGLA+ M
Sbjct: 130 DDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVN-EDCELKIL---DFGLARHTDDEM 185
Query: 534 FTVCGTPTYVAPEI-LNESGYGVKIDVWAAGVILYILLCG---FP 574
T Y APEI LN Y +D+W+ G I+ LL G FP
Sbjct: 186 TGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFP 230
>pdb|3HRB|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|3MW1|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|2YIS|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase.
pdb|2YIW|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase
Length = 359
Score = 94.0 bits (232), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 71/225 (31%), Positives = 112/225 (49%), Gaps = 19/225 (8%)
Query: 362 TIKRRENLNIPSKLLQRYSVGQIIGDGNFAVVRQVYDKHKDMDCALKIIDK--SKLLGKK 419
T R+E ++ +RY +G G + V +D + A+K + + ++ K
Sbjct: 6 TFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAK 65
Query: 420 QMIENEVNILRSVNHPNIIKLLDEY------DTNNELYLVIELIKGGDLFDAISKNVKFS 473
+ E+ +L+ + H N+I LLD + + N++YLV L+ G DL + I K K +
Sbjct: 66 RTYR-ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLM-GADL-NNIVKCQKLT 122
Query: 474 EEDSKFMTQSLASALSYLHDNYIVHRDIKPENLLVEMSGCHVKVLKVGDFGLAQRVLRPM 533
++ +F+ + L Y+H I+HRD+KP NL V C +K+L DFGLA+ M
Sbjct: 123 DDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVN-EDCELKIL---DFGLARHTDDEM 178
Query: 534 FTVCGTPTYVAPEI-LNESGYGVKIDVWAAGVILYILLCG---FP 574
T Y APEI LN Y +D+W+ G I+ LL G FP
Sbjct: 179 TGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFP 223
>pdb|3GCU|A Chain A, Human P38 Map Kinase In Complex With Rl48
pdb|3GCU|B Chain B, Human P38 Map Kinase In Complex With Rl48
pdb|3HV4|A Chain A, Human P38 Map Kinase In Complex With Rl51
pdb|3HV4|B Chain B, Human P38 Map Kinase In Complex With Rl51
pdb|3HV5|A Chain A, Human P38 Map Kinase In Complex With Rl24
pdb|3HV5|B Chain B, Human P38 Map Kinase In Complex With Rl24
pdb|3HV6|A Chain A, Human P38 Map Kinase In Complex With Rl39
pdb|3HV7|A Chain A, Human P38 Map Kinase In Complex With Rl38
pdb|3HUC|A Chain A, Human P38 Map Kinase In Complex With Rl40
pdb|3LFA|A Chain A, Human P38 Map Kinase In Complex With Dasatinib
pdb|3QUE|A Chain A, Human P38 Map Kinase In Complex With Skepinone-L
pdb|3QUD|A Chain A, Human P38 Map Kinase In Complex With
2-Amino-Phenylamino-Benzophenone
pdb|3UVP|A Chain A, Human P38 Map Kinase In Complex With A Benzamide
Substituted Benzosuberone
pdb|3UVQ|A Chain A, Human P38 Map Kinase In Complex With A Dibenzosuberone
Derivative
pdb|4EH2|A Chain A, Human P38 Map Kinase In Complex With Np-F1 And Rl87
pdb|4EH3|A Chain A, Human P38 Map Kinase In Complex With Np-F2 And Rl87
pdb|4EH4|A Chain A, Human P38 Map Kinase In Complex With Np-F3 And Rl87
pdb|4EH5|A Chain A, Human P38 Map Kinase In Complex With Np-F4 And Rl87
pdb|4EH6|A Chain A, Human P38 Map Kinase In Complex With Np-F5 And Rl87
pdb|4EH7|A Chain A, Human P38 Map Kinase In Complex With Np-F6 And Rl87
pdb|4EH8|A Chain A, Human P38 Map Kinase In Complex With Np-F7 And Rl87
pdb|4EH9|A Chain A, Human P38 Map Kinase In Complex With Np-F11 And Rl87
pdb|4EHV|A Chain A, Human P38 Map Kinase In Complex With Np-F10 And Rl87
pdb|3UVR|A Chain A, Human P38 Map Kinase In Complex With Km064
pdb|4DLI|A Chain A, Human P38 Map Kinase In Complex With Rl87
pdb|4DLJ|A Chain A, Human P38 Map Kinase In Complex With Rl163
Length = 360
Score = 94.0 bits (232), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 71/225 (31%), Positives = 112/225 (49%), Gaps = 19/225 (8%)
Query: 362 TIKRRENLNIPSKLLQRYSVGQIIGDGNFAVVRQVYDKHKDMDCALKIIDK--SKLLGKK 419
T R+E ++ +RY +G G + V +D + A+K + + ++ K
Sbjct: 7 TFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAK 66
Query: 420 QMIENEVNILRSVNHPNIIKLLDEY------DTNNELYLVIELIKGGDLFDAISKNVKFS 473
+ E+ +L+ + H N+I LLD + + N++YLV L+ G DL + I K K +
Sbjct: 67 RTYR-ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLM-GADL-NNIVKCQKLT 123
Query: 474 EEDSKFMTQSLASALSYLHDNYIVHRDIKPENLLVEMSGCHVKVLKVGDFGLAQRVLRPM 533
++ +F+ + L Y+H I+HRD+KP NL V C +K+L DFGLA+ M
Sbjct: 124 DDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVN-EDCELKIL---DFGLARHTDDEM 179
Query: 534 FTVCGTPTYVAPEI-LNESGYGVKIDVWAAGVILYILLCG---FP 574
T Y APEI LN Y +D+W+ G I+ LL G FP
Sbjct: 180 TGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFP 224
>pdb|3DT1|A Chain A, P38 Complexed With A Quinazoline Inhibitor
Length = 383
Score = 94.0 bits (232), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 70/224 (31%), Positives = 111/224 (49%), Gaps = 17/224 (7%)
Query: 362 TIKRRENLNIPSKLLQRYSVGQIIGDGNFAVVRQVYDKHKDMDCALKIIDKS-KLLGKKQ 420
T R+E ++ +RY +G G + V +D + A+K + + + + +
Sbjct: 30 TFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAK 89
Query: 421 MIENEVNILRSVNHPNIIKLLDEY------DTNNELYLVIELIKGGDLFDAISKNVKFSE 474
E+ +L+ + H N+I LLD + + N++YLV L+ G DL + I K K ++
Sbjct: 90 RTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLM-GADL-NNIVKCQKLTD 147
Query: 475 EDSKFMTQSLASALSYLHDNYIVHRDIKPENLLVEMSGCHVKVLKVGDFGLAQRVLRPMF 534
+ +F+ + L Y+H I+HRD+KP NL V C +K+L DFGLA+ M
Sbjct: 148 DHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVN-EDCELKIL---DFGLARHTDDEMT 203
Query: 535 TVCGTPTYVAPEI-LNESGYGVKIDVWAAGVILYILLCG---FP 574
T Y APEI LN Y +D+W+ G I+ LL G FP
Sbjct: 204 GYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFP 247
>pdb|3NNU|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp1376
pdb|3NNV|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp437
pdb|3NNW|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp802
Length = 354
Score = 94.0 bits (232), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 70/224 (31%), Positives = 111/224 (49%), Gaps = 17/224 (7%)
Query: 362 TIKRRENLNIPSKLLQRYSVGQIIGDGNFAVVRQVYDKHKDMDCALKIIDKS-KLLGKKQ 420
T R+E ++ +RY +G G + V +D + A+K + + + + +
Sbjct: 7 TFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAK 66
Query: 421 MIENEVNILRSVNHPNIIKLLDEY------DTNNELYLVIELIKGGDLFDAISKNVKFSE 474
E+ +L+ + H N+I LLD + + N++YLV L+ G DL + I K K ++
Sbjct: 67 RTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLM-GADL-NNIVKCQKLTD 124
Query: 475 EDSKFMTQSLASALSYLHDNYIVHRDIKPENLLVEMSGCHVKVLKVGDFGLAQRVLRPMF 534
+ +F+ + L Y+H I+HRD+KP NL V C +K+L DFGLA+ M
Sbjct: 125 DHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVN-EDCELKIL---DFGLARHTDDEMT 180
Query: 535 TVCGTPTYVAPEI-LNESGYGVKIDVWAAGVILYILLCG---FP 574
T Y APEI LN Y +D+W+ G I+ LL G FP
Sbjct: 181 GYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFP 224
>pdb|1M7Q|A Chain A, Crystal Structure Of P38 Map Kinase In Complex With A
Dihydroquinazolinone Inhibitor
pdb|1OUK|A Chain A, The Structure Of P38 Alpha In Complex With A
Pyridinylimidazole Inhibitor
pdb|1OUY|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydropyrido- Pyrimidine Inhibitor
pdb|1R39|A Chain A, The Structure Of P38alpha
pdb|1YQJ|A Chain A, Crystal Structure Of P38 Alpha In Complex With A Selective
Pyridazine Inhibitor
pdb|2OKR|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2OKR|D Chain D, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|B Chain B, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|1WFC|A Chain A, Structure Of Apo, Unphosphorylated, P38 Mitogen Activated
Protein Kinase P38 (P38 Map Kinase) The Mammalian
Homologue Of The Yeast Hog1 Protein
pdb|3DS6|A Chain A, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|B Chain B, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|C Chain C, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|D Chain D, P38 Complex With A Phthalazine Inhibitor
pdb|3FC1|X Chain X, Crystal Structure Of P38 Kinase Bound To
Pyrimido-Pyridazinone Inhibitor
pdb|3GFE|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor
pdb|3ITZ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridazine Inhibitor
pdb|3LHJ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor.
pdb|3ZYA|A Chain A, Human P38 Map Kinase In Complex With 2-Amino-Phenylamino-
Dibenzosuberone
pdb|3U8W|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Triazolopyridazinone Inhibitor
Length = 366
Score = 93.6 bits (231), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 71/225 (31%), Positives = 112/225 (49%), Gaps = 19/225 (8%)
Query: 362 TIKRRENLNIPSKLLQRYSVGQIIGDGNFAVVRQVYDKHKDMDCALKIIDK--SKLLGKK 419
T R+E ++ +RY +G G + V +D + A+K + + ++ K
Sbjct: 13 TFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAK 72
Query: 420 QMIENEVNILRSVNHPNIIKLLDEY------DTNNELYLVIELIKGGDLFDAISKNVKFS 473
+ E+ +L+ + H N+I LLD + + N++YLV L+ G DL + I K K +
Sbjct: 73 RTYR-ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLM-GADL-NNIVKCQKLT 129
Query: 474 EEDSKFMTQSLASALSYLHDNYIVHRDIKPENLLVEMSGCHVKVLKVGDFGLAQRVLRPM 533
++ +F+ + L Y+H I+HRD+KP NL V C +K+L DFGLA+ M
Sbjct: 130 DDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVN-EDCELKIL---DFGLARHTDDEM 185
Query: 534 FTVCGTPTYVAPEI-LNESGYGVKIDVWAAGVILYILLCG---FP 574
T Y APEI LN Y +D+W+ G I+ LL G FP
Sbjct: 186 TGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFP 230
>pdb|3HEC|A Chain A, P38 In Complex With Imatinib
pdb|3HEG|A Chain A, P38 In Complex With Sorafenib
Length = 348
Score = 93.6 bits (231), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 70/224 (31%), Positives = 111/224 (49%), Gaps = 17/224 (7%)
Query: 362 TIKRRENLNIPSKLLQRYSVGQIIGDGNFAVVRQVYDKHKDMDCALKIIDKS-KLLGKKQ 420
T R+E ++ +RY +G G + V +D + A+K + + + + +
Sbjct: 3 TFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAK 62
Query: 421 MIENEVNILRSVNHPNIIKLLDEY------DTNNELYLVIELIKGGDLFDAISKNVKFSE 474
E+ +L+ + H N+I LLD + + N++YLV L+ G DL + I K K ++
Sbjct: 63 RTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLM-GADL-NNIVKCQKLTD 120
Query: 475 EDSKFMTQSLASALSYLHDNYIVHRDIKPENLLVEMSGCHVKVLKVGDFGLAQRVLRPMF 534
+ +F+ + L Y+H I+HRD+KP NL V C +K+L DFGLA+ M
Sbjct: 121 DHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVN-EDCELKIL---DFGLARHTDDEMT 176
Query: 535 TVCGTPTYVAPEI-LNESGYGVKIDVWAAGVILYILLCG---FP 574
T Y APEI LN Y +D+W+ G I+ LL G FP
Sbjct: 177 GYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFP 220
>pdb|1OZ1|A Chain A, P38 Mitogen-Activated Kinase In Complex With 4-Azaindole
Inhibitor
Length = 372
Score = 93.6 bits (231), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 71/225 (31%), Positives = 112/225 (49%), Gaps = 19/225 (8%)
Query: 362 TIKRRENLNIPSKLLQRYSVGQIIGDGNFAVVRQVYDKHKDMDCALKIIDK--SKLLGKK 419
T R+E ++ +RY +G G + V +D + A+K + + ++ K
Sbjct: 19 TFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAK 78
Query: 420 QMIENEVNILRSVNHPNIIKLLDEY------DTNNELYLVIELIKGGDLFDAISKNVKFS 473
+ E+ +L+ + H N+I LLD + + N++YLV L+ G DL + I K K +
Sbjct: 79 RTYR-ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLM-GADL-NNIVKCQKLT 135
Query: 474 EEDSKFMTQSLASALSYLHDNYIVHRDIKPENLLVEMSGCHVKVLKVGDFGLAQRVLRPM 533
++ +F+ + L Y+H I+HRD+KP NL V C +K+L DFGLA+ M
Sbjct: 136 DDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVN-EDCELKIL---DFGLARHTDDEM 191
Query: 534 FTVCGTPTYVAPEI-LNESGYGVKIDVWAAGVILYILLCG---FP 574
T Y APEI LN Y +D+W+ G I+ LL G FP
Sbjct: 192 TGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFP 236
>pdb|2GFS|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3201195
pdb|3FKL|A Chain A, P38 Kinase Crystal Structure In Complex With Ro9552
pdb|3FKN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro7125
pdb|3FL4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro5634
pdb|3FLQ|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((S)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin
pdb|3FLS|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((R)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin-7-One
pdb|3FLW|A Chain A, P38 Kinase Crystal Structure In Complex With Pamapimod
pdb|3FLY|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-Isopropylamino-8-Methyl-8h-Pyrido[2,
3- D]pyrimidin-7-One
pdb|3FLZ|A Chain A, P38 Kinase Crystal Structure In Complex With
8-Methyl-6-Phenoxy-2-
(Tetrahydro-Pyran-4-Ylamino)-8h-Pyrido[2,
3-D]pyrimidin-7-One
pdb|3FMH|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((R)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FMJ|A Chain A, P38 Kinase Crystal Structure In Complex With
4-(5-Methyl-3-Phenyl- Isoxazol-4-Yl)-Pyrimidin-2-Ylamine
pdb|3FMK|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((S)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FML|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6224
pdb|3FMM|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6226
pdb|3FMN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro2530
pdb|3FSF|A Chain A, P38 Kinase Crystal Structure In Complex With 3-(2,6-
Dichloro-Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-
Phenylamino]-
1-Methyl-3,4-Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3FSK|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6257
Length = 372
Score = 93.6 bits (231), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 71/225 (31%), Positives = 112/225 (49%), Gaps = 19/225 (8%)
Query: 362 TIKRRENLNIPSKLLQRYSVGQIIGDGNFAVVRQVYDKHKDMDCALKIIDK--SKLLGKK 419
T R+E ++ +RY +G G + V +D + A+K + + ++ K
Sbjct: 19 TFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAK 78
Query: 420 QMIENEVNILRSVNHPNIIKLLDEY------DTNNELYLVIELIKGGDLFDAISKNVKFS 473
+ E+ +L+ + H N+I LLD + + N++YLV L+ G DL + I K K +
Sbjct: 79 RTYR-ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLM-GADL-NNIVKCQKLT 135
Query: 474 EEDSKFMTQSLASALSYLHDNYIVHRDIKPENLLVEMSGCHVKVLKVGDFGLAQRVLRPM 533
++ +F+ + L Y+H I+HRD+KP NL V C +K+L DFGLA+ M
Sbjct: 136 DDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVN-EDCELKIL---DFGLARHTDDEM 191
Query: 534 FTVCGTPTYVAPEI-LNESGYGVKIDVWAAGVILYILLCG---FP 574
T Y APEI LN Y +D+W+ G I+ LL G FP
Sbjct: 192 TGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFP 236
>pdb|3KQ7|A Chain A, Structure Of Human P38alpha With N-[4-Methyl-3-(6-{[2-(1-
Methylpyrrolidin-2-Yl)ethyl]amino}pyridine-3-
Amido)phenyl]- 2-(Morpholin-4-Yl)pyridine-4-Carboxamide
Length = 380
Score = 93.6 bits (231), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 70/224 (31%), Positives = 111/224 (49%), Gaps = 17/224 (7%)
Query: 362 TIKRRENLNIPSKLLQRYSVGQIIGDGNFAVVRQVYDKHKDMDCALKIIDKS-KLLGKKQ 420
T R+E ++ +RY +G G + V +D + A+K + + + + +
Sbjct: 27 TFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAK 86
Query: 421 MIENEVNILRSVNHPNIIKLLDEY------DTNNELYLVIELIKGGDLFDAISKNVKFSE 474
E+ +L+ + H N+I LLD + + N++YLV L+ G DL + I K K ++
Sbjct: 87 RTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLM-GADL-NNIVKCQKLTD 144
Query: 475 EDSKFMTQSLASALSYLHDNYIVHRDIKPENLLVEMSGCHVKVLKVGDFGLAQRVLRPMF 534
+ +F+ + L Y+H I+HRD+KP NL V C +K+L DFGLA+ M
Sbjct: 145 DHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVN-EDCELKIL---DFGLARHTDDEMT 200
Query: 535 TVCGTPTYVAPEI-LNESGYGVKIDVWAAGVILYILLCG---FP 574
T Y APEI LN Y +D+W+ G I+ LL G FP
Sbjct: 201 GYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFP 244
>pdb|2LGC|A Chain A, Joint Nmr And X-Ray Refinement Reveals The Structure Of A
Novel Dibenzo[a,D]cycloheptenone InhibitorP38 MAP KINASE
COMPLEX IN Solution
Length = 359
Score = 93.6 bits (231), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 70/224 (31%), Positives = 111/224 (49%), Gaps = 17/224 (7%)
Query: 362 TIKRRENLNIPSKLLQRYSVGQIIGDGNFAVVRQVYDKHKDMDCALKIIDKS-KLLGKKQ 420
T R+E ++ +RY +G G + V +D + A+K + + + + +
Sbjct: 12 TFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAK 71
Query: 421 MIENEVNILRSVNHPNIIKLLDEY------DTNNELYLVIELIKGGDLFDAISKNVKFSE 474
E+ +L+ + H N+I LLD + + N++YLV L+ G DL + I K K ++
Sbjct: 72 RTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLM-GADL-NNIVKCQKLTD 129
Query: 475 EDSKFMTQSLASALSYLHDNYIVHRDIKPENLLVEMSGCHVKVLKVGDFGLAQRVLRPMF 534
+ +F+ + L Y+H I+HRD+KP NL V C +K+L DFGLA+ M
Sbjct: 130 DHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVN-EDCELKIL---DFGLARHTDDEMT 185
Query: 535 TVCGTPTYVAPEI-LNESGYGVKIDVWAAGVILYILLCG---FP 574
T Y APEI LN Y +D+W+ G I+ LL G FP
Sbjct: 186 GYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFP 229
>pdb|3MPT|A Chain A, Crystal Structure Of P38 Kinase In Complex With A
Pyrrole-2- Carboxamide Inhibitor
Length = 371
Score = 93.6 bits (231), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 70/224 (31%), Positives = 111/224 (49%), Gaps = 17/224 (7%)
Query: 362 TIKRRENLNIPSKLLQRYSVGQIIGDGNFAVVRQVYDKHKDMDCALKIIDKS-KLLGKKQ 420
T R+E ++ +RY +G G + V +D + A+K + + + + +
Sbjct: 18 TFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAK 77
Query: 421 MIENEVNILRSVNHPNIIKLLDEY------DTNNELYLVIELIKGGDLFDAISKNVKFSE 474
E+ +L+ + H N+I LLD + + N++YLV L+ G DL + I K K ++
Sbjct: 78 RTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLM-GADL-NNIVKCQKLTD 135
Query: 475 EDSKFMTQSLASALSYLHDNYIVHRDIKPENLLVEMSGCHVKVLKVGDFGLAQRVLRPMF 534
+ +F+ + L Y+H I+HRD+KP NL V C +K+L DFGLA+ M
Sbjct: 136 DHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVN-EDCELKIL---DFGLARHTDDEMT 191
Query: 535 TVCGTPTYVAPEI-LNESGYGVKIDVWAAGVILYILLCG---FP 574
T Y APEI LN Y +D+W+ G I+ LL G FP
Sbjct: 192 GYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFP 235
>pdb|3S3I|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
Length = 349
Score = 93.6 bits (231), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 71/225 (31%), Positives = 112/225 (49%), Gaps = 19/225 (8%)
Query: 362 TIKRRENLNIPSKLLQRYSVGQIIGDGNFAVVRQVYDKHKDMDCALKIIDK--SKLLGKK 419
T R+E ++ +RY +G G + V +D + A+K + + ++ K
Sbjct: 4 TFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAK 63
Query: 420 QMIENEVNILRSVNHPNIIKLLDEY------DTNNELYLVIELIKGGDLFDAISKNVKFS 473
+ E+ +L+ + H N+I LLD + + N++YLV L+ G DL + I K K +
Sbjct: 64 RTYR-ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLM-GADL-NNIVKCQKLT 120
Query: 474 EEDSKFMTQSLASALSYLHDNYIVHRDIKPENLLVEMSGCHVKVLKVGDFGLAQRVLRPM 533
++ +F+ + L Y+H I+HRD+KP NL V C +K+L DFGLA+ M
Sbjct: 121 DDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVN-EDCELKIL---DFGLARHTDDEM 176
Query: 534 FTVCGTPTYVAPEI-LNESGYGVKIDVWAAGVILYILLCG---FP 574
T Y APEI LN Y +D+W+ G I+ LL G FP
Sbjct: 177 TGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFP 221
>pdb|3K3I|A Chain A, P38alpha Bound To Novel Dgf-Out Compound Pf-00215955
Length = 350
Score = 93.6 bits (231), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 70/224 (31%), Positives = 111/224 (49%), Gaps = 17/224 (7%)
Query: 362 TIKRRENLNIPSKLLQRYSVGQIIGDGNFAVVRQVYDKHKDMDCALKIIDKS-KLLGKKQ 420
T R+E ++ +RY +G G + V +D + A+K + + + + +
Sbjct: 5 TFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAK 64
Query: 421 MIENEVNILRSVNHPNIIKLLDEY------DTNNELYLVIELIKGGDLFDAISKNVKFSE 474
E+ +L+ + H N+I LLD + + N++YLV L+ G DL + I K K ++
Sbjct: 65 RTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLM-GADL-NNIVKCQKLTD 122
Query: 475 EDSKFMTQSLASALSYLHDNYIVHRDIKPENLLVEMSGCHVKVLKVGDFGLAQRVLRPMF 534
+ +F+ + L Y+H I+HRD+KP NL V C +K+L DFGLA+ M
Sbjct: 123 DHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVN-EDCELKIL---DFGLARHTDDEMT 178
Query: 535 TVCGTPTYVAPEI-LNESGYGVKIDVWAAGVILYILLCG---FP 574
T Y APEI LN Y +D+W+ G I+ LL G FP
Sbjct: 179 GYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFP 222
>pdb|1BL6|A Chain A, The Complex Structure Of The Map Kinase P38SB216995
pdb|1BL7|A Chain A, The Complex Structure Of The Map Kinase P38SB220025
pdb|2EWA|A Chain A, Dual Binding Mode Of Pyridinylimidazole To Map Kinase P38
pdb|1A9U|A Chain A, The Complex Structure Of The Map Kinase P38SB203580
pdb|3HA8|A Chain A, The Complex Structure Of The Map Kinase P38COMPOUND 14B
Length = 379
Score = 93.6 bits (231), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 70/224 (31%), Positives = 111/224 (49%), Gaps = 17/224 (7%)
Query: 362 TIKRRENLNIPSKLLQRYSVGQIIGDGNFAVVRQVYDKHKDMDCALKIIDKS-KLLGKKQ 420
T R+E ++ +RY +G G + V +D + A+K + + + + +
Sbjct: 26 TFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAK 85
Query: 421 MIENEVNILRSVNHPNIIKLLDEY------DTNNELYLVIELIKGGDLFDAISKNVKFSE 474
E+ +L+ + H N+I LLD + + N++YLV L+ G DL + I K K ++
Sbjct: 86 RTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLM-GADL-NNIVKCQKLTD 143
Query: 475 EDSKFMTQSLASALSYLHDNYIVHRDIKPENLLVEMSGCHVKVLKVGDFGLAQRVLRPMF 534
+ +F+ + L Y+H I+HRD+KP NL V C +K+L DFGLA+ M
Sbjct: 144 DHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVN-EDCELKIL---DFGLARHTDDEMT 199
Query: 535 TVCGTPTYVAPEI-LNESGYGVKIDVWAAGVILYILLCG---FP 574
T Y APEI LN Y +D+W+ G I+ LL G FP
Sbjct: 200 GYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFP 243
>pdb|1ZZL|A Chain A, Crystal Structure Of P38 With Triazolopyridine
pdb|2YIX|A Chain A, Triazolopyridine Inhibitors Of P38
Length = 351
Score = 93.6 bits (231), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 70/224 (31%), Positives = 111/224 (49%), Gaps = 17/224 (7%)
Query: 362 TIKRRENLNIPSKLLQRYSVGQIIGDGNFAVVRQVYDKHKDMDCALKIIDKS-KLLGKKQ 420
T R+E ++ +RY +G G + V +D + A+K + + + + +
Sbjct: 4 TFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAK 63
Query: 421 MIENEVNILRSVNHPNIIKLLDEY------DTNNELYLVIELIKGGDLFDAISKNVKFSE 474
E+ +L+ + H N+I LLD + + N++YLV L+ G DL + I K K ++
Sbjct: 64 RTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLM-GADL-NNIVKCQKLTD 121
Query: 475 EDSKFMTQSLASALSYLHDNYIVHRDIKPENLLVEMSGCHVKVLKVGDFGLAQRVLRPMF 534
+ +F+ + L Y+H I+HRD+KP NL V C +K+L DFGLA+ M
Sbjct: 122 DHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVN-EDCELKIL---DFGLARHTDDEMT 177
Query: 535 TVCGTPTYVAPEI-LNESGYGVKIDVWAAGVILYILLCG---FP 574
T Y APEI LN Y +D+W+ G I+ LL G FP
Sbjct: 178 GYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFP 221
>pdb|4AGU|A Chain A, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|B Chain B, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|C Chain C, Crystal Structure Of The Human Cdkl1 Kinase Domain
Length = 311
Score = 93.2 bits (230), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 77/294 (26%), Positives = 134/294 (45%), Gaps = 36/294 (12%)
Query: 375 LLQRYSVGQIIGDGNFAVVRQVYDKHKDMDCALK-IIDKSKLLGKKQMIENEVNILRSVN 433
++++Y IG+G++ VV + ++ A+K ++ K++ E+ +L+ +
Sbjct: 1 MMEKYEKIGKIGEGSYGVVFKCRNRDTGQIVAIKKFLESEDDPVIKKIALREIRMLKQLK 60
Query: 434 HPNIIKLLDEYDTNNELYLVIELIKGGDLFDAISKNVKFSEEDSKFMTQSLASALSYLHD 493
HPN++ LL+ + L+LV E L + E K +T A+++ H
Sbjct: 61 HPNLVNLLEVFRRKRRLHLVFEYCDHTVLHELDRYQRGVPEHLVKSITWQTLQAVNFCHK 120
Query: 494 NYIVHRDIKPENLLVEMSGCHVKVLKVGDFGLAQRVLRPMFTV---CGTPTYVAPEIL-N 549
+ +HRD+KPEN+L+ V+K+ DFG A+ + P T Y +PE+L
Sbjct: 121 HNCIHRDVKPENILITKHS----VIKLCDFGFARLLTGPSDYYDDEVATRWYRSPELLVG 176
Query: 550 ESGYGVKIDVWAAGVILYILLCGFPPFVSDTNDQDELF------DDIL--------SGQY 595
++ YG +DVWA G + LL G P +D D+L+ D++ + QY
Sbjct: 177 DTQYGPPVDVWAIGCVFAELLSGV-PLWPGKSDVDQLYLIRKTLGDLIPRHQQVFSTNQY 235
Query: 596 ----GFPSP--------YWDDISEEAKELISHMLESNPDLRFSAEDVLDHPWLE 637
P P + +IS A L+ L +P R + E +L HP+ E
Sbjct: 236 FSGVKIPDPEDMEPLELKFPNISYPALGLLKGCLHMDPTERLTCEQLLHHPYFE 289
>pdb|1U5Q|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5Q|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
Length = 348
Score = 93.2 bits (230), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 76/261 (29%), Positives = 122/261 (46%), Gaps = 18/261 (6%)
Query: 385 IGDGNFAVVRQVYDKHKDMDCALKIIDKSKLLG--KKQMIENEVNILRSVNHPNIIKLLD 442
IG G+F V D A+K + S K Q I EV L+ + HPN I+
Sbjct: 62 IGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYRG 121
Query: 443 EYDTNNELYLVIELIKGG--DLFDAISKNVKFSEEDSKFMTQSLASALSYLHDNYIVHRD 500
Y + +LV+E G DL + K ++ E + +T L+YLH + ++HRD
Sbjct: 122 CYLREHTAWLVMEYCLGSASDLLEVHKKPLQ--EVEIAAVTHGALQGLAYLHSHNMIHRD 179
Query: 501 IKPENLLVEMSGCHVKVLKVGDFGLAQRVLRPMFTVCGTPTYVAPEI---LNESGYGVKI 557
+K N+L+ G ++K+GDFG A ++ P GTP ++APE+ ++E Y K+
Sbjct: 180 VKAGNILLSEPG----LVKLGDFGSAS-IMAPANXFVGTPYWMAPEVILAMDEGQYDGKV 234
Query: 558 DVWAAGVILYILLCGFPPFVSDTNDQDELFDDILSGQYGFPSPYWDDISEEAKELISHML 617
DVW+ G+ L PP + N L+ + S +W SE + + L
Sbjct: 235 DVWSLGITCIELAERKPPLF-NMNAMSALYHIAQNESPALQSGHW---SEYFRNFVDSCL 290
Query: 618 ESNPDLRFSAEDVLDHPWLER 638
+ P R ++E +L H ++ R
Sbjct: 291 QKIPQDRPTSEVLLKHRFVLR 311
>pdb|1S9I|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
pdb|1S9I|B Chain B, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
Length = 354
Score = 93.2 bits (230), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 68/263 (25%), Positives = 127/263 (48%), Gaps = 18/263 (6%)
Query: 375 LLQRYSVGQI----------IGDGNFAVVRQVYDKHKDMDCALKIIDKSKLLGKKQMIEN 424
L Q+ VG++ +G GN VV +V + + A K+I + I
Sbjct: 4 LTQKAKVGELKDDDFERISELGAGNGGVVTKVQHRPSGLIMARKLIHLEIKPAIRNQIIR 63
Query: 425 EVNILRSVNHPNIIKLLDEYDTNNELYLVIELIKGGDLFDAISKNVKFSEEDSKFMTQSL 484
E+ +L N P I+ + ++ E+ + +E + GG L + + + EE ++ ++
Sbjct: 64 ELQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKEAKRIPEEILGKVSIAV 123
Query: 485 ASALSYLHDNY-IVHRDIKPENLLVEMSGCHVKVLKVGDFGLAQRVLRPMF-TVCGTPTY 542
L+YL + + I+HRD+KP N+LV G +K+ DFG++ +++ M + GT +Y
Sbjct: 124 LRGLAYLREKHQIMHRDVKPSNILVNSRG----EIKLCDFGVSGQLIDSMANSFVGTRSY 179
Query: 543 VAPEILNESGYGVKIDVWAAGVILYILLCG-FPPFVSDTNDQDELFD-DILSGQYGFPSP 600
+APE L + Y V+ D+W+ G+ L L G +P D + + +F ++ G+ G P
Sbjct: 180 MAPERLQGTHYSVQSDIWSMGLSLVELAVGRYPIPPPDAKELEAIFGRPVVDGEEGEPHS 239
Query: 601 YWDDISEEAKELISHMLESNPDL 623
+ + H ++S P +
Sbjct: 240 ISPRPRPPGRPVSGHGMDSRPAM 262
>pdb|3OZ6|A Chain A, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
pdb|3OZ6|B Chain B, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
Length = 388
Score = 93.2 bits (230), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 92/332 (27%), Positives = 146/332 (43%), Gaps = 76/332 (22%)
Query: 375 LLQRYSVGQIIGDGNFAVVRQVYDKHKDMDCALK-IIDKSKLLGKKQMIENEVNILRSVN 433
+L++Y + + +G G + +V + D+ A+K I D + Q E+ IL ++
Sbjct: 7 VLRKYELVKKLGKGAYGIVWKSIDRRTGEVVAVKKIFDAFQNSTDAQRTFREIMILTELS 66
Query: 434 -HPNIIKLLD--EYDTNNELYLVIELIKGGDLFDAISKNVKFSEEDSKFMTQSLASALSY 490
H NI+ LL+ D + ++YLV + ++ DL I N+ +++ L + Y
Sbjct: 67 GHENIVNLLNVLRADNDRDVYLVFDYMET-DLHAVIRANI-LEPVHKQYVVYQLIKVIKY 124
Query: 491 LHDNYIVHRDIKPENLLVEMSGCHVKVLKVGDFGLAQRVL-------------------- 530
LH ++HRD+KP N+L+ + CHV KV DFGL++ +
Sbjct: 125 LHSGGLLHRDMKPSNILLN-AECHV---KVADFGLSRSFVNIRRVTNNIPLSINENTENF 180
Query: 531 ---RPMFT-VCGTPTYVAPEI-LNESGYGVKIDVWAAGVILYILLCGFPPFV-SDTNDQD 584
+P+ T T Y APEI L + Y ID+W+ G IL +LCG P F S T +Q
Sbjct: 181 DDDQPILTDYVATRWYRAPEILLGSTKYTKGIDMWSLGCILGEILCGKPIFPGSSTMNQL 240
Query: 585 ELF---------DDILSGQYGFPSPY---------------------WD----------D 604
E +D+ S Q F W D
Sbjct: 241 ERIIGVIDFPSNEDVESIQSPFAKTMIESLKEKVEIRQSNKRDIFTKWKNLLLKINPKAD 300
Query: 605 ISEEAKELISHMLESNPDLRFSAEDVLDHPWL 636
+EEA +L+ +L+ NP+ R SA D L HP++
Sbjct: 301 CNEEALDLLDKLLQFNPNKRISANDALKHPFV 332
>pdb|3GC8|A Chain A, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
pdb|3GC8|B Chain B, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
Length = 370
Score = 93.2 bits (230), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 76/235 (32%), Positives = 114/235 (48%), Gaps = 23/235 (9%)
Query: 377 QRYSVGQIIGDGNFAVVRQVYDKHKDMDCALKIIDKS-KLLGKKQMIENEVNILRSVNHP 435
QR + +G G + V YD A+K + + + L + E+ +L+ + H
Sbjct: 28 QRLQGLRPVGSGAYGSVCSAYDARLRQKVAVKKLSRPFQSLIHARRTYRELRLLKHLKHE 87
Query: 436 NIIKLLDEY------DTNNELYLVIELIKGGDLFDAISKNVKFSEEDSKFMTQSLASALS 489
N+I LLD + + +E+YLV L+ G DL + I K S+E +F+ L L
Sbjct: 88 NVIGLLDVFTPATSIEDFSEVYLVTTLM-GADL-NNIVKCQALSDEHVQFLVYQLLRGLK 145
Query: 490 YLHDNYIVHRDIKPENLLVEMSGCHVKVLKVGDFGLAQRVLRPMFTVCGTPTYVAPEI-L 548
Y+H I+HRD+KP N+ V L++ DFGLA++ M T Y APEI L
Sbjct: 146 YIHSAGIIHRDLKPSNVAVNEDS----ELRILDFGLARQADEEMTGYVATRWYRAPEIML 201
Query: 549 NESGYGVKIDVWAAGVILYILLCG---FPPFVSDTNDQDELFDDILSGQYGFPSP 600
N Y +D+W+ G I+ LL G FP SD DQ + +++ G PSP
Sbjct: 202 NWMHYNQTVDIWSVGCIMAELLQGKALFPG--SDYIDQLKRIMEVV----GTPSP 250
>pdb|1YWR|A Chain A, Crystal Structure Analysis Of Inactive P38 Kinase Domain
In Complex With A Monocyclic Pyrazolone Inhibitor
Length = 360
Score = 92.8 bits (229), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 71/225 (31%), Positives = 111/225 (49%), Gaps = 19/225 (8%)
Query: 362 TIKRRENLNIPSKLLQRYSVGQIIGDGNFAVVRQVYDKHKDMDCALKIIDK--SKLLGKK 419
T R+E ++ +RY +G G + V +D A+K + + ++ K
Sbjct: 7 TFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAK 66
Query: 420 QMIENEVNILRSVNHPNIIKLLDEY------DTNNELYLVIELIKGGDLFDAISKNVKFS 473
+ E+ +L+ + H N+I LLD + + N++YLV L+ G DL + I K K +
Sbjct: 67 RTYR-ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLM-GADL-NNIVKCQKLT 123
Query: 474 EEDSKFMTQSLASALSYLHDNYIVHRDIKPENLLVEMSGCHVKVLKVGDFGLAQRVLRPM 533
++ +F+ + L Y+H I+HRD+KP NL V C +K+L DFGLA+ M
Sbjct: 124 DDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVN-EDCELKIL---DFGLARHTDDEM 179
Query: 534 FTVCGTPTYVAPEI-LNESGYGVKIDVWAAGVILYILLCG---FP 574
T Y APEI LN Y +D+W+ G I+ LL G FP
Sbjct: 180 AGFVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFP 224
>pdb|2GCD|A Chain A, Tao2 Kinase Domain-Staurosporine Structure
pdb|2GCD|B Chain B, Tao2 Kinase Domain-Staurosporine Structure
Length = 309
Score = 92.8 bits (229), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 76/261 (29%), Positives = 122/261 (46%), Gaps = 18/261 (6%)
Query: 385 IGDGNFAVVRQVYDKHKDMDCALKIIDKSKLLG--KKQMIENEVNILRSVNHPNIIKLLD 442
IG G+F V D A+K + S K Q I EV L+ + HPN I+
Sbjct: 23 IGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYRG 82
Query: 443 EYDTNNELYLVIELIKGG--DLFDAISKNVKFSEEDSKFMTQSLASALSYLHDNYIVHRD 500
Y + +LV+E G DL + K ++ E + +T L+YLH + ++HRD
Sbjct: 83 CYLREHTAWLVMEYCLGSASDLLEVHKKPLQ--EVEIAAVTHGALQGLAYLHSHNMIHRD 140
Query: 501 IKPENLLVEMSGCHVKVLKVGDFGLAQRVLRPMFTVCGTPTYVAPEI---LNESGYGVKI 557
+K N+L+ G ++K+GDFG A ++ P GTP ++APE+ ++E Y K+
Sbjct: 141 VKAGNILLSEPG----LVKLGDFGSAS-IMAPANXFVGTPYWMAPEVILAMDEGQYDGKV 195
Query: 558 DVWAAGVILYILLCGFPPFVSDTNDQDELFDDILSGQYGFPSPYWDDISEEAKELISHML 617
DVW+ G+ L PP + N L+ + S +W SE + + L
Sbjct: 196 DVWSLGITCIELAERKPPLF-NMNAMSALYHIAQNESPALQSGHW---SEYFRNFVDSCL 251
Query: 618 ESNPDLRFSAEDVLDHPWLER 638
+ P R ++E +L H ++ R
Sbjct: 252 QKIPQDRPTSEVLLKHRFVLR 272
>pdb|1YW2|A Chain A, Mutated Mus Musculus P38 Kinase (Mp38)
Length = 360
Score = 92.8 bits (229), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 71/225 (31%), Positives = 111/225 (49%), Gaps = 19/225 (8%)
Query: 362 TIKRRENLNIPSKLLQRYSVGQIIGDGNFAVVRQVYDKHKDMDCALKIIDK--SKLLGKK 419
T R+E ++ +RY +G G + V +D A+K + + ++ K
Sbjct: 7 TFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAK 66
Query: 420 QMIENEVNILRSVNHPNIIKLLDEY------DTNNELYLVIELIKGGDLFDAISKNVKFS 473
+ E+ +L+ + H N+I LLD + + N++YLV L+ G DL + I K K +
Sbjct: 67 RTYR-ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLM-GADL-NNIVKCQKLT 123
Query: 474 EEDSKFMTQSLASALSYLHDNYIVHRDIKPENLLVEMSGCHVKVLKVGDFGLAQRVLRPM 533
++ +F+ + L Y+H I+HRD+KP NL V C +K+L DFGLA+ M
Sbjct: 124 DDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVN-EDCELKIL---DFGLARHTDDEM 179
Query: 534 FTVCGTPTYVAPEI-LNESGYGVKIDVWAAGVILYILLCG---FP 574
T Y APEI LN Y +D+W+ G I+ LL G FP
Sbjct: 180 AGFVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFP 224
>pdb|3NPC|A Chain A, Crystal Structure Of Jnk2 Complexed With Birb796
pdb|3NPC|B Chain B, Crystal Structure Of Jnk2 Complexed With Birb796
Length = 364
Score = 92.8 bits (229), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 85/312 (27%), Positives = 143/312 (45%), Gaps = 62/312 (19%)
Query: 375 LLQRYSVGQIIGDGNFAVVRQVYDKHKDMDCALKIIDK---SKLLGKKQMIENEVNILRS 431
+L+RY + IG G +V +D ++ A+K + + ++ K+ E+ +L+
Sbjct: 22 VLKRYQQLKPIGSGAQGIVCAAFDTVLGINVAVKKLSRPFQNQTHAKRAY--RELVLLKC 79
Query: 432 VNHPNIIKLLDEYDTNNEL------YLVIELIKGGDLFDAISKNVKFSEEDSKFMTQSLA 485
VNH NII LL+ + L YLV+EL+ +L I +++ E ++ +
Sbjct: 80 VNHKNIISLLNVFTPQKTLEEFQDVYLVMELM-DANLCQVI--HMELDHERMSYLLYQML 136
Query: 486 SALSYLHDNYIVHRDIKPENLLVEMSGCHVKVLKVGDFGLAQRVLRP--MFTVCGTPTYV 543
+ +LH I+HRD+KP N++V+ S C +K+L DFGLA+ M T Y
Sbjct: 137 CGIKHLHSAGIIHRDLKPSNIVVK-SDCTLKIL---DFGLARTACTNFMMTPYVVTRYYR 192
Query: 544 APEILNESGYGVKIDVWAAGVILYILLCGFPPFVSDTNDQDELFDDILSGQYGFPS---- 599
APE++ GY +D+W+ G I+ L+ G F D + ++ ++ Q G PS
Sbjct: 193 APEVILGMGYAANVDIWSVGCIMGELVKGCVIF--QGTDHIDQWNKVIE-QLGTPSAEFM 249
Query: 600 --------------------------PYWDDISE---------EAKELISHMLESNPDLR 624
P W SE +A++L+S ML +PD R
Sbjct: 250 AALQPTVRNYVENRPKYPGIKFEELFPDWIFPSESERDKIKTSQARDLLSKMLVIDPDKR 309
Query: 625 FSAEDVLDHPWL 636
S ++ L HP++
Sbjct: 310 ISVDEALRHPYI 321
>pdb|3PY3|A Chain A, Crystal Structure Of Phosphorylated P38alpha Map Kinase
Length = 380
Score = 92.8 bits (229), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 70/224 (31%), Positives = 110/224 (49%), Gaps = 17/224 (7%)
Query: 362 TIKRRENLNIPSKLLQRYSVGQIIGDGNFAVVRQVYDKHKDMDCALKIIDKS-KLLGKKQ 420
T R+E ++ +RY +G G + V +D A+K + + + + +
Sbjct: 27 TFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAK 86
Query: 421 MIENEVNILRSVNHPNIIKLLDEY------DTNNELYLVIELIKGGDLFDAISKNVKFSE 474
E+ +L+ + H N+I LLD + + N++YLV L+ G DL + I K K ++
Sbjct: 87 RTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLM-GADL-NNIVKCQKLTD 144
Query: 475 EDSKFMTQSLASALSYLHDNYIVHRDIKPENLLVEMSGCHVKVLKVGDFGLAQRVLRPMF 534
+ +F+ + L Y+H I+HRD+KP NL V C +K+L DFGLA+ M
Sbjct: 145 DHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVN-EDCELKIL---DFGLARHTDDEMX 200
Query: 535 TVCGTPTYVAPEI-LNESGYGVKIDVWAAGVILYILLCG---FP 574
T Y APEI LN Y +D+W+ G I+ LL G FP
Sbjct: 201 GXVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFP 244
>pdb|1LEW|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Nuclear Substrate Mef2a
pdb|1LEZ|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Activator Mkk3b
Length = 360
Score = 92.8 bits (229), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 71/225 (31%), Positives = 111/225 (49%), Gaps = 19/225 (8%)
Query: 362 TIKRRENLNIPSKLLQRYSVGQIIGDGNFAVVRQVYDKHKDMDCALKIIDK--SKLLGKK 419
T R+E ++ +RY +G G + V +D A+K + + ++ K
Sbjct: 7 TFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAK 66
Query: 420 QMIENEVNILRSVNHPNIIKLLDEY------DTNNELYLVIELIKGGDLFDAISKNVKFS 473
+ E+ +L+ + H N+I LLD + + N++YLV L+ G DL + I K K +
Sbjct: 67 RTYR-ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLM-GADL-NNIVKCQKLT 123
Query: 474 EEDSKFMTQSLASALSYLHDNYIVHRDIKPENLLVEMSGCHVKVLKVGDFGLAQRVLRPM 533
++ +F+ + L Y+H I+HRD+KP NL V C +K+L DFGLA+ M
Sbjct: 124 DDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVN-EDCELKIL---DFGLARHTDDEM 179
Query: 534 FTVCGTPTYVAPEI-LNESGYGVKIDVWAAGVILYILLCG---FP 574
T Y APEI LN Y +D+W+ G I+ LL G FP
Sbjct: 180 TGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFP 224
>pdb|3SAY|A Chain A, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
pdb|3SAY|B Chain B, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
Length = 430
Score = 92.8 bits (229), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 81/270 (30%), Positives = 132/270 (48%), Gaps = 37/270 (13%)
Query: 379 YSVGQIIGDGNFAVVRQVYDKHKDMDCALKIIDKSKLLGKKQMIENEVNILRSVNHPNII 438
Y+ ++IG+G+F VV Q K D +++ K+L K+ E+ I+R ++H NI+
Sbjct: 56 YTDTKVIGNGSFGVVYQA----KLCDSG-ELVAIKKVLQDKRFKNRELQIMRKLDHCNIV 110
Query: 439 KL----LDEYDTNNELYLVIELIKGGDLFDAISKNVKFSEED-----SKFMTQSLASALS 489
+L + +E+YL + L + ++++ +++ K L +L+
Sbjct: 111 RLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLA 170
Query: 490 YLHDNYIVHRDIKPENLLVEMSGCHVKVLKVGDFGLAQRVLR--PMFTVCGTPTYVAPE- 546
Y+H I HRDIKP+NLL++ VLK+ DFG A++++R P + + Y APE
Sbjct: 171 YIHSFGICHRDIKPQNLLLDPD---TAVLKLCDFGSAKQLVRGEPNVSXICSRYYRAPEL 227
Query: 547 ILNESGYGVKIDVWAAGVILYILLCGFPPFVSDTNDQDELFDDILSGQYGFPSPYWDDIS 606
I + Y IDVW+AG +L LL G P F D+ D+L + I G P+
Sbjct: 228 IFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSG-VDQLVEII--KVLGTPT------- 277
Query: 607 EEAKELISHMLESNPDL-RFSAEDVLDHPW 635
+E I M NP+ F + HPW
Sbjct: 278 ---REQIREM---NPNYTEFKFPQIKAHPW 301
>pdb|4ALU|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
Length = 328
Score = 92.8 bits (229), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 74/272 (27%), Positives = 133/272 (48%), Gaps = 23/272 (8%)
Query: 375 LLQRYSVGQIIGDGNFAVVRQVYDKHKDMDCALKIIDKSKL-----LGKKQMIENEVNIL 429
L +Y VG ++G G V ++ A+K ++K ++ L + EV +L
Sbjct: 49 LESQYQVGPLLGSGGSGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLL 108
Query: 430 RSVNH--PNIIKLLDEYDTNNELYLVIELIKG-GDLFDAISKNVKFSEEDSKFMTQSLAS 486
+ V+ +I+LLD ++ + L++E + DLFD I++ EE ++ +
Sbjct: 109 KKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLE 168
Query: 487 ALSYLHDNYIVHRDIKPENLLVEMSGCHVKVLKVGDFGLAQRVLRPMFTVCGTPTYVAPE 546
A+ + H+ ++HRDIK EN+L++++ +K++ G L + + F GT Y PE
Sbjct: 169 AVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTDFD--GTRVYSPPE 226
Query: 547 ILNESGY-GVKIDVWAAGVILYILLCGFPPFVSDTNDQDELFDDILSGQYGFPSPYWDDI 605
+ Y G VW+ G++LY ++CG PF D ++I+ GQ F +
Sbjct: 227 WIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHD--------EEIIRGQVFFRQ----RV 274
Query: 606 SEEAKELISHMLESNPDLRFSAEDVLDHPWLE 637
S E + LI L P R + E++ +HPW++
Sbjct: 275 SSECQHLIRWCLALRPSDRPTFEEIQNHPWMQ 306
>pdb|1I09|A Chain A, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1I09|B Chain B, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1J1B|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1B|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1C|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|1J1C|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|2JLD|A Chain A, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|2JLD|B Chain B, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|3M1S|A Chain A, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3M1S|B Chain B, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3PUP|A Chain A, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
pdb|3PUP|B Chain B, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
Length = 420
Score = 92.4 bits (228), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 79/270 (29%), Positives = 130/270 (48%), Gaps = 37/270 (13%)
Query: 379 YSVGQIIGDGNFAVVRQVYDKHKDMDCALKIIDKSKLLGKKQMIENEVNILRSVNHPNII 438
Y+ ++IG+G+F VV Q K D +++ K+L K+ E+ I+R ++H NI+
Sbjct: 56 YTDTKVIGNGSFGVVYQA----KLCDSG-ELVAIKKVLQDKRFKNRELQIMRKLDHCNIV 110
Query: 439 KL----LDEYDTNNELYLVIELIKGGDLFDAISKNVKFSEED-----SKFMTQSLASALS 489
+L + +E+YL + L + ++++ +++ K L +L+
Sbjct: 111 RLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLA 170
Query: 490 YLHDNYIVHRDIKPENLLVEMSGCHVKVLKVGDFGLAQRVLR--PMFTVCGTPTYVAPE- 546
Y+H I HRDIKP+NLL++ VLK+ DFG A++++R P + + Y APE
Sbjct: 171 YIHSFGICHRDIKPQNLLLDPD---TAVLKLCDFGSAKQLVRGEPNVSYICSRYYRAPEL 227
Query: 547 ILNESGYGVKIDVWAAGVILYILLCGFPPFVSDTNDQDELFDDILSGQYGFPSPYWDDIS 606
I + Y IDVW+AG +L LL G P F D+ D+L + I +
Sbjct: 228 IFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSG-VDQLVEII------------KVLG 274
Query: 607 EEAKELISHMLESNPDL-RFSAEDVLDHPW 635
+E I M NP+ F + HPW
Sbjct: 275 TPTREQIREM---NPNYTEFKFPQIKAHPW 301
>pdb|2OZA|B Chain B, Structure Of P38alpha Complex
pdb|3P78|A Chain A, P38 Inhibitor-Bound
pdb|3P79|A Chain A, P38 Inhibitor-Bound
pdb|3P7A|A Chain A, P38 Inhibitor-Bound
pdb|3P7B|A Chain A, P38 Inhibitor-Bound
pdb|3P7C|A Chain A, P38 Inhibitor-Bound
pdb|3P5K|A Chain A, P38 Inhibitor-Bound
Length = 366
Score = 92.4 bits (228), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 70/224 (31%), Positives = 110/224 (49%), Gaps = 17/224 (7%)
Query: 362 TIKRRENLNIPSKLLQRYSVGQIIGDGNFAVVRQVYDKHKDMDCALKIIDKS-KLLGKKQ 420
T R+E ++ +RY +G G + V +D A+K + + + + +
Sbjct: 13 TFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAK 72
Query: 421 MIENEVNILRSVNHPNIIKLLDEY------DTNNELYLVIELIKGGDLFDAISKNVKFSE 474
E+ +L+ + H N+I LLD + + N++YLV L+ G DL + I K K ++
Sbjct: 73 RTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLM-GADL-NNIVKCQKLTD 130
Query: 475 EDSKFMTQSLASALSYLHDNYIVHRDIKPENLLVEMSGCHVKVLKVGDFGLAQRVLRPMF 534
+ +F+ + L Y+H I+HRD+KP NL V C +K+L DFGLA+ M
Sbjct: 131 DHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVN-EDCELKIL---DFGLARHTDDEMT 186
Query: 535 TVCGTPTYVAPEI-LNESGYGVKIDVWAAGVILYILLCG---FP 574
T Y APEI LN Y +D+W+ G I+ LL G FP
Sbjct: 187 GYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFP 230
>pdb|2GHL|A Chain A, Mutant Mus Musculus P38 Kinase Domain In Complex With
Inhibitor Pg-874743
pdb|2GHM|A Chain A, Mutated Map Kinase P38 (Mus Musculus) In Complex With
Inhbitor Pg-895449
Length = 348
Score = 92.4 bits (228), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 70/224 (31%), Positives = 110/224 (49%), Gaps = 17/224 (7%)
Query: 362 TIKRRENLNIPSKLLQRYSVGQIIGDGNFAVVRQVYDKHKDMDCALKIIDKS-KLLGKKQ 420
T R+E ++ +RY +G G + V +D A+K + + + + +
Sbjct: 3 TFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAK 62
Query: 421 MIENEVNILRSVNHPNIIKLLDEY------DTNNELYLVIELIKGGDLFDAISKNVKFSE 474
E+ +L+ + H N+I LLD + + N++YLV L+ G DL + I K K ++
Sbjct: 63 RTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLM-GADL-NNIVKCQKLTD 120
Query: 475 EDSKFMTQSLASALSYLHDNYIVHRDIKPENLLVEMSGCHVKVLKVGDFGLAQRVLRPMF 534
+ +F+ + L Y+H I+HRD+KP NL V C +K+L DFGLA+ M
Sbjct: 121 DHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVN-EDCELKIL---DFGLARHTDDEMA 176
Query: 535 TVCGTPTYVAPEI-LNESGYGVKIDVWAAGVILYILLCG---FP 574
T Y APEI LN Y +D+W+ G I+ LL G FP
Sbjct: 177 GFVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFP 220
>pdb|1Q5K|A Chain A, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|1Q5K|B Chain B, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|3I4B|A Chain A, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3I4B|B Chain B, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3L1S|A Chain A, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
pdb|3L1S|B Chain B, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
Length = 414
Score = 92.4 bits (228), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 81/270 (30%), Positives = 132/270 (48%), Gaps = 37/270 (13%)
Query: 379 YSVGQIIGDGNFAVVRQVYDKHKDMDCALKIIDKSKLLGKKQMIENEVNILRSVNHPNII 438
Y+ ++IG+G+F VV Q K D +++ K+L K+ E+ I+R ++H NI+
Sbjct: 50 YTDTKVIGNGSFGVVYQA----KLCDSG-ELVAIKKVLQDKRFKNRELQIMRKLDHCNIV 104
Query: 439 KL----LDEYDTNNELYLVIELIKGGDLFDAISKNVKFSEED-----SKFMTQSLASALS 489
+L + +E+YL + L + ++++ +++ K L +L+
Sbjct: 105 RLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLA 164
Query: 490 YLHDNYIVHRDIKPENLLVEMSGCHVKVLKVGDFGLAQRVLR--PMFTVCGTPTYVAPE- 546
Y+H I HRDIKP+NLL++ VLK+ DFG A++++R P + + Y APE
Sbjct: 165 YIHSFGICHRDIKPQNLLLDPD---TAVLKLCDFGSAKQLVRGEPNVSYICSRYYRAPEL 221
Query: 547 ILNESGYGVKIDVWAAGVILYILLCGFPPFVSDTNDQDELFDDILSGQYGFPSPYWDDIS 606
I + Y IDVW+AG +L LL G P F D+ D+L + I G P+
Sbjct: 222 IFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSG-VDQLVEII--KVLGTPT------- 271
Query: 607 EEAKELISHMLESNPDL-RFSAEDVLDHPW 635
+E I M NP+ F + HPW
Sbjct: 272 ---REQIREM---NPNYTEFKFPQIKAHPW 295
>pdb|3MH2|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8U|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 92.4 bits (228), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 70/225 (31%), Positives = 112/225 (49%), Gaps = 19/225 (8%)
Query: 362 TIKRRENLNIPSKLLQRYSVGQIIGDGNFAVVRQVYDKHKDMDCALKIIDK--SKLLGKK 419
T R+E ++ +RY +G G + V +D + A+K + + ++ K
Sbjct: 7 TFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAK 66
Query: 420 QMIENEVNILRSVNHPNIIKLLDEY------DTNNELYLVIELIKGGDLFDAISKNVKFS 473
+ E+ +L+ + H N+I LLD + + N++YLV L+ G DL + I K K +
Sbjct: 67 RTYR-ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLM-GADL-NNIVKCQKLT 123
Query: 474 EEDSKFMTQSLASALSYLHDNYIVHRDIKPENLLVEMSGCHVKVLKVGDFGLAQRVLRPM 533
++ +F+ + L Y+H I+HRD+KP NL V C +K+L D+GLA+ M
Sbjct: 124 DDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVN-EDCELKIL---DYGLARHTDDEM 179
Query: 534 FTVCGTPTYVAPEI-LNESGYGVKIDVWAAGVILYILLCG---FP 574
T Y APEI LN Y +D+W+ G I+ LL G FP
Sbjct: 180 TGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFP 224
>pdb|1Q3D|A Chain A, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3D|B Chain B, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3W|A Chain A, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q3W|B Chain B, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q41|A Chain A, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q41|B Chain B, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q4L|A Chain A, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|1Q4L|B Chain B, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|3Q3B|A Chain A, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
pdb|3Q3B|B Chain B, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
Length = 424
Score = 92.4 bits (228), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 79/270 (29%), Positives = 130/270 (48%), Gaps = 37/270 (13%)
Query: 379 YSVGQIIGDGNFAVVRQVYDKHKDMDCALKIIDKSKLLGKKQMIENEVNILRSVNHPNII 438
Y+ ++IG+G+F VV Q K D +++ K+L K+ E+ I+R ++H NI+
Sbjct: 60 YTDTKVIGNGSFGVVYQA----KLCDSG-ELVAIKKVLQDKRFKNRELQIMRKLDHCNIV 114
Query: 439 KL----LDEYDTNNELYLVIELIKGGDLFDAISKNVKFSEED-----SKFMTQSLASALS 489
+L + +E+YL + L + ++++ +++ K L +L+
Sbjct: 115 RLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLA 174
Query: 490 YLHDNYIVHRDIKPENLLVEMSGCHVKVLKVGDFGLAQRVLR--PMFTVCGTPTYVAPE- 546
Y+H I HRDIKP+NLL++ VLK+ DFG A++++R P + + Y APE
Sbjct: 175 YIHSFGICHRDIKPQNLLLDPD---TAVLKLCDFGSAKQLVRGEPNVSYICSRYYRAPEL 231
Query: 547 ILNESGYGVKIDVWAAGVILYILLCGFPPFVSDTNDQDELFDDILSGQYGFPSPYWDDIS 606
I + Y IDVW+AG +L LL G P F D+ D+L + I +
Sbjct: 232 IFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSG-VDQLVEII------------KVLG 278
Query: 607 EEAKELISHMLESNPDL-RFSAEDVLDHPW 635
+E I M NP+ F + HPW
Sbjct: 279 TPTREQIREM---NPNYTEFKFPQIKAHPW 305
>pdb|2W9F|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 92.4 bits (228), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 87/295 (29%), Positives = 127/295 (43%), Gaps = 39/295 (13%)
Query: 378 RYSVGQIIGDGNFAVVRQVYDKHKDMDCALKIID-KSKLLGKKQMIENEVNILR---SVN 433
RY IG G + V + D H ALK + + G EV +LR +
Sbjct: 5 RYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGEEGLPISTVREVALLRRLEAFE 64
Query: 434 HPNIIKLLD-----EYDTNNELYLVIELIKGGDLFDAISKNVK--FSEEDSKFMTQSLAS 486
HPN+++L+D D ++ LV E + DL + K E K + +
Sbjct: 65 HPNVVRLMDVCATSRTDREIKVTLVFEHVDQ-DLRTYLDKAPPPGLPAETIKDLMRQFLR 123
Query: 487 ALSYLHDNYIVHRDIKPENLLVEMSGCHVKVLKVGDFGLAQRVLRPM--FTVCGTPTYVA 544
L +LH N IVHRD+KPEN+LV G +K+ DFGLA+ M F V T Y A
Sbjct: 124 GLDFLHANCIVHRDLKPENILVTSGG----TVKLADFGLARIYSYQMALFPVVVTLWYRA 179
Query: 545 PEILNESGYGVKIDVWAAGVILYILLCGFPPFV--SDTNDQDELFD------------DI 590
PE+L +S Y +D+W+ G I + P F S+ + ++FD D+
Sbjct: 180 PEVLLQSTYATPVDMWSVGCIFAEMFRRKPLFCGNSEADQLGKIFDLIGLPPEDDWPRDV 239
Query: 591 LSGQYGFP-------SPYWDDISEEAKELISHMLESNPDLRFSAEDVLDHPWLER 638
+ FP ++ E +L+ ML NP R SA L H +L +
Sbjct: 240 SLPRGAFPPRGPRPVQSVVPEMEESGAQLLLEMLTFNPHKRISAFRALQHSYLHK 294
>pdb|1PYX|A Chain A, Gsk-3 Beta Complexed With Amp-Pnp
pdb|1PYX|B Chain B, Gsk-3 Beta Complexed With Amp-Pnp
pdb|3DU8|A Chain A, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
pdb|3DU8|B Chain B, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
Length = 422
Score = 92.4 bits (228), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 79/270 (29%), Positives = 130/270 (48%), Gaps = 37/270 (13%)
Query: 379 YSVGQIIGDGNFAVVRQVYDKHKDMDCALKIIDKSKLLGKKQMIENEVNILRSVNHPNII 438
Y+ ++IG+G+F VV Q K D +++ K+L K+ E+ I+R ++H NI+
Sbjct: 58 YTDTKVIGNGSFGVVYQA----KLCDSG-ELVAIKKVLQDKRFKNRELQIMRKLDHCNIV 112
Query: 439 KL----LDEYDTNNELYLVIELIKGGDLFDAISKNVKFSEED-----SKFMTQSLASALS 489
+L + +E+YL + L + ++++ +++ K L +L+
Sbjct: 113 RLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLA 172
Query: 490 YLHDNYIVHRDIKPENLLVEMSGCHVKVLKVGDFGLAQRVLR--PMFTVCGTPTYVAPE- 546
Y+H I HRDIKP+NLL++ VLK+ DFG A++++R P + + Y APE
Sbjct: 173 YIHSFGICHRDIKPQNLLLDPD---TAVLKLCDFGSAKQLVRGEPNVSYICSRYYRAPEL 229
Query: 547 ILNESGYGVKIDVWAAGVILYILLCGFPPFVSDTNDQDELFDDILSGQYGFPSPYWDDIS 606
I + Y IDVW+AG +L LL G P F D+ D+L + I +
Sbjct: 230 IFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSG-VDQLVEII------------KVLG 276
Query: 607 EEAKELISHMLESNPDL-RFSAEDVLDHPW 635
+E I M NP+ F + HPW
Sbjct: 277 TPTREQIREM---NPNYTEFKFPQIKAHPW 303
>pdb|3P4K|A Chain A, The Third Conformation Of P38a Map Kinase Observed In
Phosphorylated P38a And In Solution
Length = 370
Score = 92.4 bits (228), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 71/225 (31%), Positives = 111/225 (49%), Gaps = 19/225 (8%)
Query: 362 TIKRRENLNIPSKLLQRYSVGQIIGDGNFAVVRQVYDKHKDMDCALKIIDK--SKLLGKK 419
T R+E ++ +RY +G G + V +D A+K + + ++ K
Sbjct: 17 TFYRQELNKTIWEVPERYQNLAPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAK 76
Query: 420 QMIENEVNILRSVNHPNIIKLLDEY------DTNNELYLVIELIKGGDLFDAISKNVKFS 473
+ E+ +L+ + H N+I LLD + + N++YLV L+ G DL + I K K +
Sbjct: 77 RTYR-ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLM-GADL-NNIVKCQKLT 133
Query: 474 EEDSKFMTQSLASALSYLHDNYIVHRDIKPENLLVEMSGCHVKVLKVGDFGLAQRVLRPM 533
++ +F+ + L Y+H I+HRD+KP NL V C +K+L DFGLA+ M
Sbjct: 134 DDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVN-EDCELKIL---DFGLARHTDDEM 189
Query: 534 FTVCGTPTYVAPEI-LNESGYGVKIDVWAAGVILYILLCG---FP 574
T Y APEI LN Y +D+W+ G I+ LL G FP
Sbjct: 190 TGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFP 234
>pdb|4ACC|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACC|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACD|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACD|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACG|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACG|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACH|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACH|B Chain B, Gsk3b In Complex With Inhibitor
Length = 465
Score = 92.4 bits (228), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 79/270 (29%), Positives = 130/270 (48%), Gaps = 37/270 (13%)
Query: 379 YSVGQIIGDGNFAVVRQVYDKHKDMDCALKIIDKSKLLGKKQMIENEVNILRSVNHPNII 438
Y+ ++IG+G+F VV Q K D +++ K+L K+ E+ I+R ++H NI+
Sbjct: 101 YTDTKVIGNGSFGVVYQA----KLCDSG-ELVAIKKVLQDKRFKNRELQIMRKLDHCNIV 155
Query: 439 KL----LDEYDTNNELYLVIELIKGGDLFDAISKNVKFSEED-----SKFMTQSLASALS 489
+L + +E+YL + L + ++++ +++ K L +L+
Sbjct: 156 RLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLA 215
Query: 490 YLHDNYIVHRDIKPENLLVEMSGCHVKVLKVGDFGLAQRVLR--PMFTVCGTPTYVAPE- 546
Y+H I HRDIKP+NLL++ VLK+ DFG A++++R P + + Y APE
Sbjct: 216 YIHSFGICHRDIKPQNLLLDPD---TAVLKLCDFGSAKQLVRGEPNVSYICSRYYRAPEL 272
Query: 547 ILNESGYGVKIDVWAAGVILYILLCGFPPFVSDTNDQDELFDDILSGQYGFPSPYWDDIS 606
I + Y IDVW+AG +L LL G P F D+ D+L + I +
Sbjct: 273 IFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSG-VDQLVEII------------KVLG 319
Query: 607 EEAKELISHMLESNPDL-RFSAEDVLDHPW 635
+E I M NP+ F + HPW
Sbjct: 320 TPTREQIREM---NPNYTEFKFPQIKAHPW 346
>pdb|2GTM|A Chain A, Mutated Mouse P38 Map Kinase Domain In Complex With
Inhibitor Pg-892579
pdb|2GTN|A Chain A, Mutated Map Kinase P38 (mus Musculus) In Complex With
Inhbitor Pg-951717
Length = 348
Score = 92.4 bits (228), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 70/224 (31%), Positives = 110/224 (49%), Gaps = 17/224 (7%)
Query: 362 TIKRRENLNIPSKLLQRYSVGQIIGDGNFAVVRQVYDKHKDMDCALKIIDKS-KLLGKKQ 420
T R+E ++ +RY +G G + V +D A+K + + + + +
Sbjct: 3 TFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAK 62
Query: 421 MIENEVNILRSVNHPNIIKLLDEY------DTNNELYLVIELIKGGDLFDAISKNVKFSE 474
E+ +L+ + H N+I LLD + + N++YLV L+ G DL + I K K ++
Sbjct: 63 RTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLM-GADL-NNIVKCQKLTD 120
Query: 475 EDSKFMTQSLASALSYLHDNYIVHRDIKPENLLVEMSGCHVKVLKVGDFGLAQRVLRPMF 534
+ +F+ + L Y+H I+HRD+KP NL V C +K+L DFGLA+ M
Sbjct: 121 DHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVN-EDCELKIL---DFGLARHTDDEMT 176
Query: 535 TVCGTPTYVAPEI-LNESGYGVKIDVWAAGVILYILLCG---FP 574
T Y APEI LN Y +D+W+ G I+ LL G FP
Sbjct: 177 GYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFP 220
>pdb|2EVA|A Chain A, Structural Basis For The Interaction Of Tak1 Kinase With
Its Activating Protein Tab1
pdb|2YIY|A Chain A, Crystal Structure Of Compound 8 Bound To Tak1-Tab
Length = 307
Score = 92.4 bits (228), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 77/266 (28%), Positives = 126/266 (47%), Gaps = 37/266 (13%)
Query: 381 VGQIIGDGNFAVVRQVYDKHKDMDCALKIIDKSKLLGKKQMIENEVNILRSVNHPNIIKL 440
V +++G G F VV + K + D A+K I+ +++ E+ L VNHPNI+KL
Sbjct: 12 VEEVVGRGAFGVVCKA--KWRAKDVAIKQIESES---ERKAFIVELRQLSRVNHPNIVKL 66
Query: 441 LDEYDTNNELYLVIELIKGGDLFDAISKNVKFSEEDSKFMTQSLA--------SALSYLH 492
N + LV+E +GG L+ NV E + T + A ++YLH
Sbjct: 67 YGA--CLNPVCLVMEYAEGGSLY-----NVLHGAEPLPYYTAAHAMSWCLQCSQGVAYLH 119
Query: 493 D---NYIVHRDIKPENLLVEMSGCHVKVLKVGDFGLAQRVLRPMFTVCGTPTYVAPEILN 549
++HRD+KP NLL+ G VLK+ DFG A + M G+ ++APE+
Sbjct: 120 SMQPKALIHRDLKPPNLLLVAGG---TVLKICDFGTACDIQTHMTNNKGSAAWMAPEVFE 176
Query: 550 ESGYGVKIDVWAAGVILYILLCGFPPFVSDTNDQDEL----FDDILSGQYGFPSPYWDDI 605
S Y K DV++ G+IL+ ++ PF DE+ F + + G P ++
Sbjct: 177 GSNYSEKCDVFSWGIILWEVITRRKPF-------DEIGGPAFRIMWAVHNGTRPPLIKNL 229
Query: 606 SEEAKELISHMLESNPDLRFSAEDVL 631
+ + L++ +P R S E+++
Sbjct: 230 PKPIESLMTRCWSKDPSQRPSMEEIV 255
>pdb|1BMK|A Chain A, The Complex Structure Of The Map Kinase P38SB218655
pdb|1P38|A Chain A, The Structure Of The Map Kinase P38 At 2.1 Angstoms
Resolution
Length = 379
Score = 92.4 bits (228), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 71/225 (31%), Positives = 111/225 (49%), Gaps = 19/225 (8%)
Query: 362 TIKRRENLNIPSKLLQRYSVGQIIGDGNFAVVRQVYDKHKDMDCALKIIDK--SKLLGKK 419
T R+E ++ +RY +G G + V +D A+K + + ++ K
Sbjct: 26 TFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAK 85
Query: 420 QMIENEVNILRSVNHPNIIKLLDEY------DTNNELYLVIELIKGGDLFDAISKNVKFS 473
+ E+ +L+ + H N+I LLD + + N++YLV L+ G DL + I K K +
Sbjct: 86 RTYR-ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLM-GADL-NNIVKCQKLT 142
Query: 474 EEDSKFMTQSLASALSYLHDNYIVHRDIKPENLLVEMSGCHVKVLKVGDFGLAQRVLRPM 533
++ +F+ + L Y+H I+HRD+KP NL V C +K+L DFGLA+ M
Sbjct: 143 DDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVN-EDCELKIL---DFGLARHTDDEM 198
Query: 534 FTVCGTPTYVAPEI-LNESGYGVKIDVWAAGVILYILLCG---FP 574
T Y APEI LN Y +D+W+ G I+ LL G FP
Sbjct: 199 TGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFP 243
>pdb|4GS6|A Chain A, Irreversible Inhibition Of Tak1 Kinase By 5z-7-oxozeaenol
Length = 315
Score = 92.4 bits (228), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 77/266 (28%), Positives = 126/266 (47%), Gaps = 37/266 (13%)
Query: 381 VGQIIGDGNFAVVRQVYDKHKDMDCALKIIDKSKLLGKKQMIENEVNILRSVNHPNIIKL 440
V +++G G F VV + K + D A+K I+ +++ E+ L VNHPNI+KL
Sbjct: 13 VEEVVGRGAFGVVCKA--KWRAKDVAIKQIESES---ERKAFIVELRQLSRVNHPNIVKL 67
Query: 441 LDEYDTNNELYLVIELIKGGDLFDAISKNVKFSEEDSKFMTQSLA--------SALSYLH 492
N + LV+E +GG L+ NV E + T + A ++YLH
Sbjct: 68 YGA--CLNPVCLVMEYAEGGSLY-----NVLHGAEPLPYYTAAHAMSWCLQCSQGVAYLH 120
Query: 493 D---NYIVHRDIKPENLLVEMSGCHVKVLKVGDFGLAQRVLRPMFTVCGTPTYVAPEILN 549
++HRD+KP NLL+ G VLK+ DFG A + M G+ ++APE+
Sbjct: 121 SMQPKALIHRDLKPPNLLLVAGG---TVLKICDFGTACDIQTHMTNNKGSAAWMAPEVFE 177
Query: 550 ESGYGVKIDVWAAGVILYILLCGFPPFVSDTNDQDEL----FDDILSGQYGFPSPYWDDI 605
S Y K DV++ G+IL+ ++ PF DE+ F + + G P ++
Sbjct: 178 GSNYSEKCDVFSWGIILWEVITRRKPF-------DEIGGPAFRIMWAVHNGTRPPLIKNL 230
Query: 606 SEEAKELISHMLESNPDLRFSAEDVL 631
+ + L++ +P R S E+++
Sbjct: 231 PKPIESLMTRCWSKDPSQRPSMEEIV 256
>pdb|4DIT|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Imidazopyridine Inhibitor
Length = 382
Score = 92.4 bits (228), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 81/270 (30%), Positives = 132/270 (48%), Gaps = 37/270 (13%)
Query: 379 YSVGQIIGDGNFAVVRQVYDKHKDMDCALKIIDKSKLLGKKQMIENEVNILRSVNHPNII 438
Y+ ++IG+G+F VV Q K D +++ K+L K+ E+ I+R ++H NI+
Sbjct: 34 YTDTKVIGNGSFGVVYQA----KLCDSG-ELVAIKKVLQDKRFKNRELQIMRKLDHCNIV 88
Query: 439 KL----LDEYDTNNELYLVIELIKGGDLFDAISKNVKFSEED-----SKFMTQSLASALS 489
+L + +E+YL + L + ++++ +++ K L +L+
Sbjct: 89 RLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLA 148
Query: 490 YLHDNYIVHRDIKPENLLVEMSGCHVKVLKVGDFGLAQRVLR--PMFTVCGTPTYVAPE- 546
Y+H I HRDIKP+NLL++ VLK+ DFG A++++R P + + Y APE
Sbjct: 149 YIHSFGICHRDIKPQNLLLDPD---TAVLKLCDFGSAKQLVRGEPNVSXICSRYYRAPEL 205
Query: 547 ILNESGYGVKIDVWAAGVILYILLCGFPPFVSDTNDQDELFDDILSGQYGFPSPYWDDIS 606
I + Y IDVW+AG +L LL G P F D+ D+L + I G P+
Sbjct: 206 IFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSG-VDQLVEII--KVLGTPT------- 255
Query: 607 EEAKELISHMLESNPDL-RFSAEDVLDHPW 635
+E I M NP+ F + HPW
Sbjct: 256 ---REQIREM---NPNYTEFKFPQIKAHPW 279
>pdb|1R0E|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
pdb|1R0E|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
Length = 391
Score = 92.4 bits (228), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 79/270 (29%), Positives = 130/270 (48%), Gaps = 37/270 (13%)
Query: 379 YSVGQIIGDGNFAVVRQVYDKHKDMDCALKIIDKSKLLGKKQMIENEVNILRSVNHPNII 438
Y+ ++IG+G+F VV Q K D +++ K+L K+ E+ I+R ++H NI+
Sbjct: 27 YTDTKVIGNGSFGVVYQA----KLCDSG-ELVAIKKVLQDKRFKNRELQIMRKLDHCNIV 81
Query: 439 KL----LDEYDTNNELYLVIELIKGGDLFDAISKNVKFSEED-----SKFMTQSLASALS 489
+L + +E+YL + L + ++++ +++ K L +L+
Sbjct: 82 RLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLA 141
Query: 490 YLHDNYIVHRDIKPENLLVEMSGCHVKVLKVGDFGLAQRVLR--PMFTVCGTPTYVAPE- 546
Y+H I HRDIKP+NLL++ VLK+ DFG A++++R P + + Y APE
Sbjct: 142 YIHSFGICHRDIKPQNLLLDPD---TAVLKLCDFGSAKQLVRGEPNVSYICSRYYRAPEL 198
Query: 547 ILNESGYGVKIDVWAAGVILYILLCGFPPFVSDTNDQDELFDDILSGQYGFPSPYWDDIS 606
I + Y IDVW+AG +L LL G P F D+ D+L + I +
Sbjct: 199 IFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSG-VDQLVEII------------KVLG 245
Query: 607 EEAKELISHMLESNPDL-RFSAEDVLDHPW 635
+E I M NP+ F + HPW
Sbjct: 246 TPTREQIREM---NPNYTEFKFPQIKAHPW 272
>pdb|3TG1|A Chain A, Crystal Structure Of P38alpha In Complex With A Mapk
Docking Partner
Length = 380
Score = 92.4 bits (228), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 70/224 (31%), Positives = 110/224 (49%), Gaps = 17/224 (7%)
Query: 362 TIKRRENLNIPSKLLQRYSVGQIIGDGNFAVVRQVYDKHKDMDCALKIIDKS-KLLGKKQ 420
T R+E ++ +RY +G G + V +D A+K + + + + +
Sbjct: 27 TFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAK 86
Query: 421 MIENEVNILRSVNHPNIIKLLDEY------DTNNELYLVIELIKGGDLFDAISKNVKFSE 474
E+ +L+ + H N+I LLD + + N++YLV L+ G DL + I K K ++
Sbjct: 87 RTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLM-GADL-NNIVKCQKLTD 144
Query: 475 EDSKFMTQSLASALSYLHDNYIVHRDIKPENLLVEMSGCHVKVLKVGDFGLAQRVLRPMF 534
+ +F+ + L Y+H I+HRD+KP NL V C +K+L DFGLA+ M
Sbjct: 145 DHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVN-EDCELKIL---DFGLARHTDDEMT 200
Query: 535 TVCGTPTYVAPEI-LNESGYGVKIDVWAAGVILYILLCG---FP 574
T Y APEI LN Y +D+W+ G I+ LL G FP
Sbjct: 201 GYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFP 244
>pdb|1GNG|A Chain A, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
pdb|1GNG|B Chain B, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
Length = 378
Score = 92.0 bits (227), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 81/270 (30%), Positives = 132/270 (48%), Gaps = 37/270 (13%)
Query: 379 YSVGQIIGDGNFAVVRQVYDKHKDMDCALKIIDKSKLLGKKQMIENEVNILRSVNHPNII 438
Y+ ++IG+G+F VV Q K D +++ K+L K+ E+ I+R ++H NI+
Sbjct: 41 YTDTKVIGNGSFGVVYQA----KLCDSG-ELVAIKKVLQDKRFKNRELQIMRKLDHCNIV 95
Query: 439 KL----LDEYDTNNELYLVIELIKGGDLFDAISKNVKFSEED-----SKFMTQSLASALS 489
+L + +E+YL + L + ++++ +++ K L +L+
Sbjct: 96 RLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLA 155
Query: 490 YLHDNYIVHRDIKPENLLVEMSGCHVKVLKVGDFGLAQRVLR--PMFTVCGTPTYVAPE- 546
Y+H I HRDIKP+NLL++ VLK+ DFG A++++R P + + Y APE
Sbjct: 156 YIHSFGICHRDIKPQNLLLDPD---TAVLKLCDFGSAKQLVRGEPNVSXICSRYYRAPEL 212
Query: 547 ILNESGYGVKIDVWAAGVILYILLCGFPPFVSDTNDQDELFDDILSGQYGFPSPYWDDIS 606
I + Y IDVW+AG +L LL G P F D+ D+L + I G P+
Sbjct: 213 IFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSG-VDQLVEII--KVLGTPT------- 262
Query: 607 EEAKELISHMLESNPDL-RFSAEDVLDHPW 635
+E I M NP+ F + HPW
Sbjct: 263 ---REQIREM---NPNYTEFKFPQIKAHPW 286
>pdb|4AFJ|A Chain A, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
pdb|4AFJ|B Chain B, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
Length = 367
Score = 92.0 bits (227), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 81/270 (30%), Positives = 132/270 (48%), Gaps = 37/270 (13%)
Query: 379 YSVGQIIGDGNFAVVRQVYDKHKDMDCALKIIDKSKLLGKKQMIENEVNILRSVNHPNII 438
Y+ ++IG+G+F VV Q K D +++ K+L K+ E+ I+R ++H NI+
Sbjct: 30 YTDTKVIGNGSFGVVYQA----KLCDSG-ELVAIKKVLQDKRFKNRELQIMRKLDHCNIV 84
Query: 439 KL----LDEYDTNNELYLVIELIKGGDLFDAISKNVKFSEED-----SKFMTQSLASALS 489
+L + +E+YL + L + ++++ +++ K L +L+
Sbjct: 85 RLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLA 144
Query: 490 YLHDNYIVHRDIKPENLLVEMSGCHVKVLKVGDFGLAQRVLR--PMFTVCGTPTYVAPE- 546
Y+H I HRDIKP+NLL++ VLK+ DFG A++++R P + + Y APE
Sbjct: 145 YIHSFGICHRDIKPQNLLLDPD---TAVLKLCDFGSAKQLVRGEPNVSXICSRYYRAPEL 201
Query: 547 ILNESGYGVKIDVWAAGVILYILLCGFPPFVSDTNDQDELFDDILSGQYGFPSPYWDDIS 606
I + Y IDVW+AG +L LL G P F D+ D+L + I G P+
Sbjct: 202 IFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSG-VDQLVEII--KVLGTPT------- 251
Query: 607 EEAKELISHMLESNPDL-RFSAEDVLDHPW 635
+E I M NP+ F + HPW
Sbjct: 252 ---REQIREM---NPNYTEFKFPQIKAHPW 275
>pdb|3R63|A Chain A, Structure Of Erk2 (Spe) Mutant (S246e)
Length = 358
Score = 92.0 bits (227), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 86/299 (28%), Positives = 134/299 (44%), Gaps = 45/299 (15%)
Query: 378 RYSVGQIIGDGNFAVVRQVYDKHKDMDCALKIIDKSKLLGKKQMIENEVNILRSVNHPNI 437
RY+ IG+G + +V YD + A+K I + Q E+ IL H NI
Sbjct: 22 RYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENI 81
Query: 438 IKLLD-----EYDTNNELYLVIELIKGGDLFDAISKNVKFSEEDSKFMTQSLASALSYLH 492
I + D + ++Y+V +L++ DL+ + K S + + + L Y+H
Sbjct: 82 IGINDIIRAPTIEQMKDVYIVQDLMET-DLYKLL-KTQHLSNDHICYFLYQILRGLKYIH 139
Query: 493 DNYIVHRDIKPENLLVEMSGCHVKVLKVGDFGLAQRVLRP-------MFTVCGTPTYVAP 545
++HRD+KP NLL+ + C LK+ DFGLA RV P + T Y AP
Sbjct: 140 SANVLHRDLKPSNLLLNTT-CD---LKICDFGLA-RVADPDHDHTGFLTEYVATRWYRAP 194
Query: 546 EI-LNESGYGVKIDVWAAGVILYILLCGFPPF--------------VSDTNDQDEL--FD 588
EI LN GY ID+W+ G IL +L P F + + +Q++L
Sbjct: 195 EIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPEQEDLNCII 254
Query: 589 DILSGQYGFPSPY-----WDDI----SEEAKELISHMLESNPDLRFSAEDVLDHPWLER 638
++ + Y P+ W+ + +A +L+ ML NP R E L HP+LE+
Sbjct: 255 NLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHPYLEQ 313
>pdb|3ZRK|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRK|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRM|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
pdb|3ZRM|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
Length = 371
Score = 91.7 bits (226), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 79/270 (29%), Positives = 130/270 (48%), Gaps = 37/270 (13%)
Query: 379 YSVGQIIGDGNFAVVRQVYDKHKDMDCALKIIDKSKLLGKKQMIENEVNILRSVNHPNII 438
Y+ ++IG+G+F VV Q K D +++ K+L K+ E+ I+R ++H NI+
Sbjct: 34 YTDTKVIGNGSFGVVYQA----KLCDSG-ELVAIKKVLQDKRFKNRELQIMRKLDHCNIV 88
Query: 439 KL----LDEYDTNNELYLVIELIKGGDLFDAISKNVKFSEED-----SKFMTQSLASALS 489
+L + +E+YL + L + ++++ +++ K L +L+
Sbjct: 89 RLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLA 148
Query: 490 YLHDNYIVHRDIKPENLLVEMSGCHVKVLKVGDFGLAQRVLR--PMFTVCGTPTYVAPE- 546
Y+H I HRDIKP+NLL++ VLK+ DFG A++++R P + + Y APE
Sbjct: 149 YIHSFGICHRDIKPQNLLLDPD---TAVLKLCDFGSAKQLVRGEPNVSXICSRYYRAPEL 205
Query: 547 ILNESGYGVKIDVWAAGVILYILLCGFPPFVSDTNDQDELFDDILSGQYGFPSPYWDDIS 606
I + Y IDVW+AG +L LL G P F D+ D+L + I +
Sbjct: 206 IFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSG-VDQLVEII------------KVLG 252
Query: 607 EEAKELISHMLESNPDL-RFSAEDVLDHPW 635
+E I M NP+ F + HPW
Sbjct: 253 TPTREQIREM---NPNYTEFKFPQIKAHPW 279
>pdb|1ZYC|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYD|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp.
pdb|1ZYD|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp
Length = 303
Score = 91.7 bits (226), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 75/286 (26%), Positives = 135/286 (47%), Gaps = 44/286 (15%)
Query: 384 IIGDGNFAVVRQVYDKHKDMDCALKIIDKSKLLGKK-QMIENEVNILRSVNHP------- 435
++G G F QV +D I K + +K I +EV +L S+NH
Sbjct: 13 VLGQGAFG---QVVKARNALDSRYYAIKKIRHTEEKLSTILSEVMLLASLNHQYVVRYYA 69
Query: 436 ------NIIKLLDEYDTNNELYLVIELIKGGDLFDAI-SKNVKFSEEDSKFMTQSLASAL 488
N +K + + L++ +E + L+D I S+N+ ++ + + + AL
Sbjct: 70 AWLERRNFVKPMTAVKKKSTLFIQMEYCENRTLYDLIHSENLNQQRDEYWRLFRQILEAL 129
Query: 489 SYLHDNYIVHRDIKPENLLVEMSGCHVKVLKVGDFGLAQRVLRP---------------- 532
SY+H I+HRD+KP N+ ++ S + +K+GDFGLA+ V R
Sbjct: 130 SYIHSQGIIHRDLKPMNIFIDES----RNVKIGDFGLAKNVHRSLDILKLDSQNLPGSSD 185
Query: 533 -MFTVCGTPTYVAPEILNESG-YGVKIDVWAAGVILYILLCGFPPFVSDTNDQDELFDDI 590
+ + GT YVA E+L+ +G Y KID+++ G+I + ++ F + N + +
Sbjct: 186 NLTSAIGTAMYVATEVLDGTGHYNEKIDMYSLGIIFFEMIYPFSTGMERVN----ILKKL 241
Query: 591 LSGQYGFPSPYWDDISEEAKELISHMLESNPDLRFSAEDVLDHPWL 636
S FP + D+ + K++I +++ +P+ R A +L+ WL
Sbjct: 242 RSVSIEFPPDFDDNKMKVEKKIIRLLIDHDPNKRPGARTLLNSGWL 287
>pdb|2O5K|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Benzoimidazol Inhibitor
Length = 372
Score = 91.7 bits (226), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 79/270 (29%), Positives = 130/270 (48%), Gaps = 37/270 (13%)
Query: 379 YSVGQIIGDGNFAVVRQVYDKHKDMDCALKIIDKSKLLGKKQMIENEVNILRSVNHPNII 438
Y+ ++IG+G+F VV Q K D +++ K+L K+ E+ I+R ++H NI+
Sbjct: 35 YTDTKVIGNGSFGVVYQA----KLCDSG-ELVAIKKVLQDKRFKNRELQIMRKLDHCNIV 89
Query: 439 KL----LDEYDTNNELYLVIELIKGGDLFDAISKNVKFSEED-----SKFMTQSLASALS 489
+L + +E+YL + L + ++++ +++ K L +L+
Sbjct: 90 RLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLA 149
Query: 490 YLHDNYIVHRDIKPENLLVEMSGCHVKVLKVGDFGLAQRVLR--PMFTVCGTPTYVAPE- 546
Y+H I HRDIKP+NLL++ VLK+ DFG A++++R P + + Y APE
Sbjct: 150 YIHSFGICHRDIKPQNLLLDPD---TAVLKLCDFGSAKQLVRGEPNVSYICSRYYRAPEL 206
Query: 547 ILNESGYGVKIDVWAAGVILYILLCGFPPFVSDTNDQDELFDDILSGQYGFPSPYWDDIS 606
I + Y IDVW+AG +L LL G P F D+ D+L + I +
Sbjct: 207 IFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSG-VDQLVEII------------KVLG 253
Query: 607 EEAKELISHMLESNPDL-RFSAEDVLDHPW 635
+E I M NP+ F + HPW
Sbjct: 254 TPTREQIREM---NPNYTEFKFPQIKAHPW 280
>pdb|3COI|A Chain A, Crystal Structure Of P38delta Kinase
Length = 353
Score = 91.7 bits (226), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 83/288 (28%), Positives = 130/288 (45%), Gaps = 44/288 (15%)
Query: 385 IGDGNFAVVRQVYDKHKDMDCALKIIDK---SKLLGKKQMIENEVNILRSVNHPNIIKLL 441
+G G + V DK A+K + + S++ K+ E+ +L+ + H N+I LL
Sbjct: 32 VGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEIFAKRAY--RELLLLKHMQHENVIGLL 89
Query: 442 DEYDTNNEL------YLVIELIKGGDLFDAISKNVKFSEEDSKFMTQSLASALSYLHDNY 495
D + + L YLV+ ++ DL + +KFSEE +++ + L Y+H
Sbjct: 90 DVFTPASSLRNFYDFYLVMPFMQT-DLQKIM--GLKFSEEKIQYLVYQMLKGLKYIHSAG 146
Query: 496 IVHRDIKPENLLVEMSGCHVKVLKVGDFGLAQRVLRPMFTVCGTPTYVAPE-ILNESGYG 554
+VHRD+KP NL V C +K+L DFGLA+ M T Y APE IL+ Y
Sbjct: 147 VVHRDLKPGNLAVN-EDCELKIL---DFGLARHADAEMTGYVVTRWYRAPEVILSWMHYN 202
Query: 555 VKIDVWAAGVILYILLCGFPPFVS-DTNDQ---------------DELFDDILSGQY--G 596
+D+W+ G I+ +L G F D DQ + +D + Y
Sbjct: 203 QTVDIWSVGCIMAEMLTGKTLFKGKDYLDQLTQILKVTGVPGTEFVQKLNDKAAKSYIQS 262
Query: 597 FPSPYWDDISE-------EAKELISHMLESNPDLRFSAEDVLDHPWLE 637
P D ++ +A +L+ MLE + D R +A L HP+ E
Sbjct: 263 LPQTPRKDFTQLFPRASPQAADLLEKMLELDVDKRLTAAQALTHPFFE 310
>pdb|2OW3|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
pdb|2OW3|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
Length = 352
Score = 91.7 bits (226), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 79/270 (29%), Positives = 130/270 (48%), Gaps = 37/270 (13%)
Query: 379 YSVGQIIGDGNFAVVRQVYDKHKDMDCALKIIDKSKLLGKKQMIENEVNILRSVNHPNII 438
Y+ ++IG+G+F VV Q K D +++ K+L K+ E+ I+R ++H NI+
Sbjct: 22 YTDTKVIGNGSFGVVYQA----KLCDSG-ELVAIKKVLQDKRFKNRELQIMRKLDHCNIV 76
Query: 439 KL----LDEYDTNNELYLVIELIKGGDLFDAISKNVKFSEED-----SKFMTQSLASALS 489
+L + +E+YL + L + ++++ +++ K L +L+
Sbjct: 77 RLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLA 136
Query: 490 YLHDNYIVHRDIKPENLLVEMSGCHVKVLKVGDFGLAQRVLR--PMFTVCGTPTYVAPE- 546
Y+H I HRDIKP+NLL++ VLK+ DFG A++++R P + + Y APE
Sbjct: 137 YIHSFGICHRDIKPQNLLLDPD---TAVLKLCDFGSAKQLVRGEPNVSXICSRYYRAPEL 193
Query: 547 ILNESGYGVKIDVWAAGVILYILLCGFPPFVSDTNDQDELFDDILSGQYGFPSPYWDDIS 606
I + Y IDVW+AG +L LL G P F D+ D+L + I +
Sbjct: 194 IFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSG-VDQLVEII------------KVLG 240
Query: 607 EEAKELISHMLESNPDL-RFSAEDVLDHPW 635
+E I M NP+ F + HPW
Sbjct: 241 TPTREQIREM---NPNYTEFKFPQIKAHPW 267
>pdb|1H8F|A Chain A, Glycogen Synthase Kinase 3 Beta.
pdb|1H8F|B Chain B, Glycogen Synthase Kinase 3 Beta
Length = 352
Score = 91.7 bits (226), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 79/270 (29%), Positives = 130/270 (48%), Gaps = 37/270 (13%)
Query: 379 YSVGQIIGDGNFAVVRQVYDKHKDMDCALKIIDKSKLLGKKQMIENEVNILRSVNHPNII 438
Y+ ++IG+G+F VV Q K D +++ K+L K E+ I+R ++H NI+
Sbjct: 22 YTDTKVIGNGSFGVVYQA----KLCDSG-ELVAIKKVLQGKAFKNRELQIMRKLDHCNIV 76
Query: 439 KL----LDEYDTNNELYLVIELIKGGDLFDAISKNVKFSEED-----SKFMTQSLASALS 489
+L + +E+YL + L + ++++ +++ K L +L+
Sbjct: 77 RLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLA 136
Query: 490 YLHDNYIVHRDIKPENLLVEMSGCHVKVLKVGDFGLAQRVLR--PMFTVCGTPTYVAPE- 546
Y+H I HRDIKP+NLL++ VLK+ DFG A++++R P + + Y APE
Sbjct: 137 YIHSFGICHRDIKPQNLLLDPD---TAVLKLCDFGSAKQLVRGEPNVSYICSRYYRAPEL 193
Query: 547 ILNESGYGVKIDVWAAGVILYILLCGFPPFVSDTNDQDELFDDILSGQYGFPSPYWDDIS 606
I + Y IDVW+AG +L LL G P F D+ D+L + I +
Sbjct: 194 IFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSG-VDQLVEII------------KVLG 240
Query: 607 EEAKELISHMLESNPDL-RFSAEDVLDHPW 635
+E I M NP+ F+ + HPW
Sbjct: 241 TPTREQIREM---NPNYTEFAFPQIKAHPW 267
>pdb|3GB2|A Chain A, Gsk3beta Inhibitor Complex
Length = 353
Score = 91.7 bits (226), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 79/270 (29%), Positives = 130/270 (48%), Gaps = 37/270 (13%)
Query: 379 YSVGQIIGDGNFAVVRQVYDKHKDMDCALKIIDKSKLLGKKQMIENEVNILRSVNHPNII 438
Y+ ++IG+G+F VV Q K D +++ K+L K+ E+ I+R ++H NI+
Sbjct: 26 YTDTKVIGNGSFGVVYQA----KLCDSG-ELVAIKKVLQDKRFKNRELQIMRKLDHCNIV 80
Query: 439 KL----LDEYDTNNELYLVIELIKGGDLFDAISKNVKFSEED-----SKFMTQSLASALS 489
+L + +E+YL + L + ++++ +++ K L +L+
Sbjct: 81 RLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLA 140
Query: 490 YLHDNYIVHRDIKPENLLVEMSGCHVKVLKVGDFGLAQRVLR--PMFTVCGTPTYVAPE- 546
Y+H I HRDIKP+NLL++ VLK+ DFG A++++R P + + Y APE
Sbjct: 141 YIHSFGICHRDIKPQNLLLDPD---TAVLKLCDFGSAKQLVRGEPNVSXICSRYYRAPEL 197
Query: 547 ILNESGYGVKIDVWAAGVILYILLCGFPPFVSDTNDQDELFDDILSGQYGFPSPYWDDIS 606
I + Y IDVW+AG +L LL G P F D+ D+L + I +
Sbjct: 198 IFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSG-VDQLVEII------------KVLG 244
Query: 607 EEAKELISHMLESNPDL-RFSAEDVLDHPW 635
+E I M NP+ F + HPW
Sbjct: 245 TPTREQIREM---NPNYTEFKFPQIKAHPW 271
>pdb|3ZDI|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Inhibitor 7d
Length = 350
Score = 91.7 bits (226), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 79/270 (29%), Positives = 130/270 (48%), Gaps = 37/270 (13%)
Query: 379 YSVGQIIGDGNFAVVRQVYDKHKDMDCALKIIDKSKLLGKKQMIENEVNILRSVNHPNII 438
Y+ ++IG+G+F VV Q K D +++ K+L K+ E+ I+R ++H NI+
Sbjct: 22 YTDTKVIGNGSFGVVYQA----KLCDSG-ELVAIKKVLQDKRFKNRELQIMRKLDHCNIV 76
Query: 439 KL----LDEYDTNNELYLVIELIKGGDLFDAISKNVKFSEED-----SKFMTQSLASALS 489
+L + +E+YL + L + ++++ +++ K L +L+
Sbjct: 77 RLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLA 136
Query: 490 YLHDNYIVHRDIKPENLLVEMSGCHVKVLKVGDFGLAQRVLR--PMFTVCGTPTYVAPE- 546
Y+H I HRDIKP+NLL++ VLK+ DFG A++++R P + + Y APE
Sbjct: 137 YIHSFGICHRDIKPQNLLLDPD---TAVLKLCDFGSAKQLVRGEPNVSXICSRYYRAPEL 193
Query: 547 ILNESGYGVKIDVWAAGVILYILLCGFPPFVSDTNDQDELFDDILSGQYGFPSPYWDDIS 606
I + Y IDVW+AG +L LL G P F D+ D+L + I +
Sbjct: 194 IFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSG-VDQLVEII------------KVLG 240
Query: 607 EEAKELISHMLESNPDL-RFSAEDVLDHPW 635
+E I M NP+ F + HPW
Sbjct: 241 TPTREQIREM---NPNYTEFKFPQIKAHPW 267
>pdb|4B99|A Chain A, Crystal Structure Of Mapk7 (Erk5) With Inhibitor
Length = 398
Score = 91.7 bits (226), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 88/329 (26%), Positives = 139/329 (42%), Gaps = 48/329 (14%)
Query: 351 TKTSVARCATATIKRRENLNIPSKLLQRYSVGQIIGDGNFAVVRQVYDKHKDMDCALKII 410
T SVA A +K R + ++ + Y + + IG+G + VV + A+K I
Sbjct: 29 TAASVAAKNLALLKAR-SFDVTFDVGDEYEIIETIGNGAYGVVSSARRRLTGQQVAIKKI 87
Query: 411 DKS-KLLGKKQMIENEVNILRSVNHPNIIKLLD------EYDTNNELYLVIELIKGGDLF 463
+ ++ + E+ IL+ H NII + D Y +Y+V++L++ DL
Sbjct: 88 PNAFDVVTNAKRTLRELKILKHFKHDNIIAIKDILRPTVPYGEFKSVYVVLDLMES-DLH 146
Query: 464 DAISKNVKFSEEDSKFMTQSLASALSYLHDNYIVHRDIKPENLLVEMSGCHVKVLKVGDF 523
I + + E ++ L L Y+H ++HRD+KP NLLV C LK+GDF
Sbjct: 147 QIIHSSQPLTLEHVRYFLYQLLRGLKYMHSAQVIHRDLKPSNLLVN-ENCE---LKIGDF 202
Query: 524 GLAQRVLRP-------MFTVCGTPTYVAPEI-LNESGYGVKIDVWAAGVI---------- 565
G+A+ + M T Y APE+ L+ Y ID+W+ G I
Sbjct: 203 GMARGLCTSPAEHQYFMTEYVATRWYRAPELMLSLHEYTQAIDLWSVGCIFGEMLARRQL 262
Query: 566 -----------LYILLCGFP-PFVSDTNDQDELFDDILSGQYGFPSPYWDDI----SEEA 609
L +++ G P P V + + I S P P W+ + +A
Sbjct: 263 FPGKNYVHQLQLIMMVLGTPSPAVIQAVGAERVRAYIQSLPPRQPVP-WETVYPGADRQA 321
Query: 610 KELISHMLESNPDLRFSAEDVLDHPWLER 638
L+ ML P R SA L HP+L +
Sbjct: 322 LSLLGRMLRFEPSARISAAAALRHPFLAK 350
>pdb|4G9R|A Chain A, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
pdb|4G9R|B Chain B, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
Length = 307
Score = 91.7 bits (226), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 75/257 (29%), Positives = 129/257 (50%), Gaps = 28/257 (10%)
Query: 357 RCATATIKRRE---NLNIPSKLLQRYSVGQIIGDGNFAVVRQVYDKHKDMDCALKIIDKS 413
R T+ RR+ + IP + +VGQ IG G+F V Y D A+K+++ +
Sbjct: 16 RNRMKTLGRRDSSDDWEIPDGQI---TVGQRIGSGSFGTV---YKGKWHGDVAVKMLNVT 69
Query: 414 KLLGKK-QMIENEVNILRSVNHPNIIKLLDEYDTNNELYLVIELIKGGDLFDAISK-NVK 471
++ Q +NEV +LR H NI+ L Y T +L +V + +G L+ + K
Sbjct: 70 APTPQQLQAFKNEVGVLRKTRHVNIL-LFMGYSTKPQLAIVTQWCEGSSLYHHLHIIETK 128
Query: 472 FSEEDSKFMTQSLASALSYLHDNYIVHRDIKPENLLVEMSGCHVKVLKVGDFGLAQRVLR 531
F + + A + YLH I+HRD+K N+ + +K+GDFGLA R
Sbjct: 129 FEMIKLIDIARQTAQGMDYLHAKSIIHRDLKSNNIFLHED----LTVKIGDFGLATEKSR 184
Query: 532 -----PMFTVCGTPTYVAPEIL---NESGYGVKIDVWAAGVILYILLCGFPPFVSDTNDQ 583
+ G+ ++APE++ +++ Y + DV+A G++LY L+ G P+ S+ N++
Sbjct: 185 WSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPY-SNINNR 243
Query: 584 DELFDDILSGQYGFPSP 600
D++ + G+ G+ SP
Sbjct: 244 DQII--FMVGR-GYLSP 257
>pdb|3SD0|A Chain A, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|3SD0|B Chain B, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|4B7T|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Leucettine L4
Length = 350
Score = 91.7 bits (226), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 79/270 (29%), Positives = 130/270 (48%), Gaps = 37/270 (13%)
Query: 379 YSVGQIIGDGNFAVVRQVYDKHKDMDCALKIIDKSKLLGKKQMIENEVNILRSVNHPNII 438
Y+ ++IG+G+F VV Q K D +++ K+L K+ E+ I+R ++H NI+
Sbjct: 22 YTDTKVIGNGSFGVVYQA----KLCDSG-ELVAIKKVLQDKRFKNRELQIMRKLDHCNIV 76
Query: 439 KL----LDEYDTNNELYLVIELIKGGDLFDAISKNVKFSEED-----SKFMTQSLASALS 489
+L + +E+YL + L + ++++ +++ K L +L+
Sbjct: 77 RLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLA 136
Query: 490 YLHDNYIVHRDIKPENLLVEMSGCHVKVLKVGDFGLAQRVLR--PMFTVCGTPTYVAPE- 546
Y+H I HRDIKP+NLL++ VLK+ DFG A++++R P + + Y APE
Sbjct: 137 YIHSFGICHRDIKPQNLLLDPD---TAVLKLCDFGSAKQLVRGEPNVSYICSRYYRAPEL 193
Query: 547 ILNESGYGVKIDVWAAGVILYILLCGFPPFVSDTNDQDELFDDILSGQYGFPSPYWDDIS 606
I + Y IDVW+AG +L LL G P F D+ D+L + I +
Sbjct: 194 IFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSG-VDQLVEII------------KVLG 240
Query: 607 EEAKELISHMLESNPDL-RFSAEDVLDHPW 635
+E I M NP+ F + HPW
Sbjct: 241 TPTREQIREM---NPNYTEFKFPQIKAHPW 267
>pdb|3F7Z|A Chain A, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
pdb|3F7Z|B Chain B, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
Length = 350
Score = 91.7 bits (226), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 79/270 (29%), Positives = 130/270 (48%), Gaps = 37/270 (13%)
Query: 379 YSVGQIIGDGNFAVVRQVYDKHKDMDCALKIIDKSKLLGKKQMIENEVNILRSVNHPNII 438
Y+ ++IG+G+F VV Q K D +++ K+L K+ E+ I+R ++H NI+
Sbjct: 23 YTDTKVIGNGSFGVVYQA----KLCDSG-ELVAIKKVLQDKRFKNRELQIMRKLDHCNIV 77
Query: 439 KL----LDEYDTNNELYLVIELIKGGDLFDAISKNVKFSEED-----SKFMTQSLASALS 489
+L + +E+YL + L + ++++ +++ K L +L+
Sbjct: 78 RLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLA 137
Query: 490 YLHDNYIVHRDIKPENLLVEMSGCHVKVLKVGDFGLAQRVLR--PMFTVCGTPTYVAPE- 546
Y+H I HRDIKP+NLL++ VLK+ DFG A++++R P + + Y APE
Sbjct: 138 YIHSFGICHRDIKPQNLLLDPD---TAVLKLCDFGSAKQLVRGEPNVSXICSRYYRAPEL 194
Query: 547 ILNESGYGVKIDVWAAGVILYILLCGFPPFVSDTNDQDELFDDILSGQYGFPSPYWDDIS 606
I + Y IDVW+AG +L LL G P F D+ D+L + I +
Sbjct: 195 IFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSG-VDQLVEII------------KVLG 241
Query: 607 EEAKELISHMLESNPDL-RFSAEDVLDHPW 635
+E I M NP+ F + HPW
Sbjct: 242 TPTREQIREM---NPNYTEFKFPQIKAHPW 268
>pdb|3G33|A Chain A, Crystal Structure Of Cdk4CYCLIN D3
pdb|3G33|C Chain C, Crystal Structure Of Cdk4CYCLIN D3
Length = 308
Score = 91.7 bits (226), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 88/301 (29%), Positives = 127/301 (42%), Gaps = 48/301 (15%)
Query: 378 RYSVGQIIGDGNFAVVRQVYDKHKDMDCALKIIDKSKLLGKKQMIE----NEVNILR--- 430
RY IG G + V + D H ALK + G + EV +LR
Sbjct: 10 RYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGGGGGGGLPISTVREVALLRRLE 69
Query: 431 SVNHPNIIKLLD-----EYDTNNELYLVIELIKGGDLFDAISKNVK--FSEEDSKFMTQS 483
+ HPN+++L+D D ++ LV E + DL + K E K + +
Sbjct: 70 AFEHPNVVRLMDVCATSRTDREIKVTLVFEHVDQ-DLRTYLDKAPPPGLPAETIKDLMRQ 128
Query: 484 LASALSYLHDNYIVHRDIKPENLLVEMSGCHVKVLKVGDFGLA-----QRVLRPMFTVCG 538
L +LH N IVHRD+KPEN+LV G +K+ DFGLA Q L P V
Sbjct: 129 FLRGLDFLHANCIVHRDLKPENILVTSGG----TVKLADFGLARIYSYQMALTP---VVV 181
Query: 539 TPTYVAPEILNESGYGVKIDVWAAGVILYILLCGFPPFV--SDTNDQDELFD-------- 588
T Y APE+L +S Y +D+W+ G I + P F S+ + ++FD
Sbjct: 182 TLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFRRKPLFCGNSEADQLGKIFDLIGLPPED 241
Query: 589 ----DILSGQYGFP-------SPYWDDISEEAKELISHMLESNPDLRFSAEDVLDHPWLE 637
D+ + FP ++ E +L+ ML NP R SA L H +L
Sbjct: 242 DWPRDVSLPRGAFPPRGPRPVQSVVPEMEESGAQLLLEMLTFNPHKRISAFRALQHSYLH 301
Query: 638 R 638
+
Sbjct: 302 K 302
>pdb|4GSB|A Chain A, Monoclinic Crystal Form Of The Apo-Erk2
Length = 364
Score = 91.7 bits (226), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 85/299 (28%), Positives = 132/299 (44%), Gaps = 45/299 (15%)
Query: 378 RYSVGQIIGDGNFAVVRQVYDKHKDMDCALKIIDKSKLLGKKQMIENEVNILRSVNHPNI 437
RY+ IG+G + +V YD + A+K I + Q E+ IL H NI
Sbjct: 28 RYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYXQRTLREIKILLRFRHENI 87
Query: 438 IKLLD-----EYDTNNELYLVIELIKGGDLFDAISKNVKFSEEDSKFMTQSLASALSYLH 492
I + D + ++Y+V +L++ DL+ + K S + + + L Y+H
Sbjct: 88 IGINDIIRAPTIEQMKDVYIVQDLMET-DLYKLL-KTQHLSNDHICYFLYQILRGLKYIH 145
Query: 493 DNYIVHRDIKPENLLVEMSGCHVKVLKVGDFGLAQRVLRP-------MFTVCGTPTYVAP 545
++HRD+KP NLL+ + LK+ DFGLA RV P + T Y AP
Sbjct: 146 SANVLHRDLKPSNLLLNTT----XDLKICDFGLA-RVADPDHDHTGFLTEYVATRWYRAP 200
Query: 546 EI-LNESGYGVKIDVWAAGVILYILLCGFPPF--------------VSDTNDQDEL--FD 588
EI LN GY ID+W+ G IL +L P F + + Q++L
Sbjct: 201 EIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCII 260
Query: 589 DILSGQYGFPSPY-----WDDI----SEEAKELISHMLESNPDLRFSAEDVLDHPWLER 638
++ + Y P+ W+ + +A +L+ ML NP R E L HP+LE+
Sbjct: 261 NLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHPYLEQ 319
>pdb|2BAQ|A Chain A, P38alpha Bound To Ro3201195
Length = 365
Score = 91.7 bits (226), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 67/209 (32%), Positives = 103/209 (49%), Gaps = 17/209 (8%)
Query: 377 QRYSVGQIIGDGNFAVVRQVYDKHKDMDCALKIIDKS-KLLGKKQMIENEVNILRSVNHP 435
+RY IG G + V +D + A+K + + + + + E+ +L+ + H
Sbjct: 27 ERYQNLSPIGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE 86
Query: 436 NIIKLLDEY------DTNNELYLVIELIKGGDLFDAISKNVKFSEEDSKFMTQSLASALS 489
N+I LLD + + N++YLV L+ G DL + I K K +++ +F+ + L
Sbjct: 87 NVIGLLDVFTPARSLEEFNDVYLVTHLM-GADL-NNIVKCQKLTDDHVQFLIYQILRGLK 144
Query: 490 YLHDNYIVHRDIKPENLLVEMSGCHVKVLKVGDFGLAQRVLRPMFTVCGTPTYVAPEI-L 548
Y+H I+HRD+KP NL V LK+ DFGLA+ M T Y APEI L
Sbjct: 145 YIHSADIIHRDLKPSNLAVNED----XELKILDFGLARHTDDEMTGYVATRWYRAPEIML 200
Query: 549 NESGYGVKIDVWAAGVILYILLCG---FP 574
N Y +D+W+ G I+ LL G FP
Sbjct: 201 NWMHYNQTVDIWSVGCIMAELLTGRTLFP 229
>pdb|3ZUV|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
pdb|3ZUV|C Chain C, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
Length = 364
Score = 91.7 bits (226), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 86/299 (28%), Positives = 133/299 (44%), Gaps = 45/299 (15%)
Query: 378 RYSVGQIIGDGNFAVVRQVYDKHKDMDCALKIIDKSKLLGKKQMIENEVNILRSVNHPNI 437
RY+ IG+G + +V YD + A+K I + Q E+ IL H NI
Sbjct: 28 RYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENI 87
Query: 438 IKLLD-----EYDTNNELYLVIELIKGGDLFDAISKNVKFSEEDSKFMTQSLASALSYLH 492
I + D + ++Y+V +L++ DL+ + K S + + + L Y+H
Sbjct: 88 IGINDIIRAPTIEQMKDVYIVQDLMET-DLYKLL-KTQHLSNDHICYFLYQILRGLKYIH 145
Query: 493 DNYIVHRDIKPENLLVEMSGCHVKVLKVGDFGLAQRVLRP-------MFTVCGTPTYVAP 545
++HRD+KP NLL+ + C LK+ DFGLA RV P + T Y AP
Sbjct: 146 SANVLHRDLKPSNLLLNTT-CD---LKICDFGLA-RVADPDHDHTGFLXEXVATRWYRAP 200
Query: 546 EI-LNESGYGVKIDVWAAGVILYILLCGFPPF--------------VSDTNDQDEL--FD 588
EI LN GY ID+W+ G IL +L P F + + Q++L
Sbjct: 201 EIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCII 260
Query: 589 DILSGQYGFPSPY-----WDDI----SEEAKELISHMLESNPDLRFSAEDVLDHPWLER 638
++ + Y P+ W+ + +A +L+ ML NP R E L HP+LE+
Sbjct: 261 NLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHPYLEQ 319
>pdb|2ERK|A Chain A, Phosphorylated Map Kinase Erk2
Length = 365
Score = 91.7 bits (226), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 86/299 (28%), Positives = 133/299 (44%), Gaps = 45/299 (15%)
Query: 378 RYSVGQIIGDGNFAVVRQVYDKHKDMDCALKIIDKSKLLGKKQMIENEVNILRSVNHPNI 437
RY+ IG+G + +V YD + A+K I + Q E+ IL H NI
Sbjct: 29 RYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENI 88
Query: 438 IKLLD-----EYDTNNELYLVIELIKGGDLFDAISKNVKFSEEDSKFMTQSLASALSYLH 492
I + D + ++Y+V +L++ DL+ + K S + + + L Y+H
Sbjct: 89 IGINDIIRAPTIEQMKDVYIVQDLMET-DLYKLL-KTQHLSNDHICYFLYQILRGLKYIH 146
Query: 493 DNYIVHRDIKPENLLVEMSGCHVKVLKVGDFGLAQRVLRP-------MFTVCGTPTYVAP 545
++HRD+KP NLL+ + C LK+ DFGLA RV P + T Y AP
Sbjct: 147 SANVLHRDLKPSNLLLNTT-CD---LKICDFGLA-RVADPDHDHTGFLXEXVATRWYRAP 201
Query: 546 EI-LNESGYGVKIDVWAAGVILYILLCGFPPF--------------VSDTNDQDEL--FD 588
EI LN GY ID+W+ G IL +L P F + + Q++L
Sbjct: 202 EIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCII 261
Query: 589 DILSGQYGFPSPY-----WDDI----SEEAKELISHMLESNPDLRFSAEDVLDHPWLER 638
++ + Y P+ W+ + +A +L+ ML NP R E L HP+LE+
Sbjct: 262 NLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHPYLEQ 320
>pdb|2Y9Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4FMQ|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 91.7 bits (226), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 86/299 (28%), Positives = 133/299 (44%), Gaps = 45/299 (15%)
Query: 378 RYSVGQIIGDGNFAVVRQVYDKHKDMDCALKIIDKSKLLGKKQMIENEVNILRSVNHPNI 437
RY+ IG+G + +V YD + A+K I + Q E+ IL H NI
Sbjct: 26 RYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENI 85
Query: 438 IKLLD-----EYDTNNELYLVIELIKGGDLFDAISKNVKFSEEDSKFMTQSLASALSYLH 492
I + D + ++Y+V +L++ DL+ + K S + + + L Y+H
Sbjct: 86 IGINDIIRAPTIEQMKDVYIVQDLMET-DLYKLL-KTQHLSNDHICYFLYQILRGLKYIH 143
Query: 493 DNYIVHRDIKPENLLVEMSGCHVKVLKVGDFGLAQRVLRP-------MFTVCGTPTYVAP 545
++HRD+KP NLL+ + C LK+ DFGLA RV P + T Y AP
Sbjct: 144 SANVLHRDLKPSNLLLNTT-CD---LKICDFGLA-RVADPDHDHTGFLTEYVATRWYRAP 198
Query: 546 EI-LNESGYGVKIDVWAAGVILYILLCGFPPF--------------VSDTNDQDEL--FD 588
EI LN GY ID+W+ G IL +L P F + + Q++L
Sbjct: 199 EIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCII 258
Query: 589 DILSGQYGFPSPY-----WDDI----SEEAKELISHMLESNPDLRFSAEDVLDHPWLER 638
++ + Y P+ W+ + +A +L+ ML NP R E L HP+LE+
Sbjct: 259 NLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHPYLEQ 317
>pdb|3O71|A Chain A, Crystal Structure Of Erk2DCC PEPTIDE COMPLEX
Length = 358
Score = 91.7 bits (226), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 86/299 (28%), Positives = 133/299 (44%), Gaps = 45/299 (15%)
Query: 378 RYSVGQIIGDGNFAVVRQVYDKHKDMDCALKIIDKSKLLGKKQMIENEVNILRSVNHPNI 437
RY+ IG+G + +V YD + A+K I + Q E+ IL H NI
Sbjct: 22 RYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENI 81
Query: 438 IKLLD-----EYDTNNELYLVIELIKGGDLFDAISKNVKFSEEDSKFMTQSLASALSYLH 492
I + D + ++Y+V +L++ DL+ + K S + + + L Y+H
Sbjct: 82 IGINDIIRAPTIEQMKDVYIVQDLMET-DLYKLL-KTQHLSNDHICYFLYQILRGLKYIH 139
Query: 493 DNYIVHRDIKPENLLVEMSGCHVKVLKVGDFGLAQRVLRP-------MFTVCGTPTYVAP 545
++HRD+KP NLL+ + C LK+ DFGLA RV P + T Y AP
Sbjct: 140 SANVLHRDLKPSNLLLNTT-CD---LKICDFGLA-RVADPDHDHTGFLTEYVATRWYRAP 194
Query: 546 EI-LNESGYGVKIDVWAAGVILYILLCGFPPF--------------VSDTNDQDEL--FD 588
EI LN GY ID+W+ G IL +L P F + + Q++L
Sbjct: 195 EIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCII 254
Query: 589 DILSGQYGFPSPY-----WDDI----SEEAKELISHMLESNPDLRFSAEDVLDHPWLER 638
++ + Y P+ W+ + +A +L+ ML NP R E L HP+LE+
Sbjct: 255 NLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHPYLEQ 313
>pdb|3ZU7|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Map Kinase Erk2
Length = 365
Score = 91.7 bits (226), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 86/299 (28%), Positives = 133/299 (44%), Gaps = 45/299 (15%)
Query: 378 RYSVGQIIGDGNFAVVRQVYDKHKDMDCALKIIDKSKLLGKKQMIENEVNILRSVNHPNI 437
RY+ IG+G + +V YD + A+K I + Q E+ IL H NI
Sbjct: 29 RYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENI 88
Query: 438 IKLLD-----EYDTNNELYLVIELIKGGDLFDAISKNVKFSEEDSKFMTQSLASALSYLH 492
I + D + ++Y+V +L++ DL+ + K S + + + L Y+H
Sbjct: 89 IGINDIIRAPTIEQMKDVYIVQDLMET-DLYKLL-KTQHLSNDHICYFLYQILRGLKYIH 146
Query: 493 DNYIVHRDIKPENLLVEMSGCHVKVLKVGDFGLAQRVLRP-------MFTVCGTPTYVAP 545
++HRD+KP NLL+ + C LK+ DFGLA RV P + T Y AP
Sbjct: 147 SANVLHRDLKPSNLLLNTT-CD---LKICDFGLA-RVADPDHDHTGFLTEYVATRWYRAP 201
Query: 546 EI-LNESGYGVKIDVWAAGVILYILLCGFPPF--------------VSDTNDQDEL--FD 588
EI LN GY ID+W+ G IL +L P F + + Q++L
Sbjct: 202 EIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCII 261
Query: 589 DILSGQYGFPSPY-----WDDI----SEEAKELISHMLESNPDLRFSAEDVLDHPWLER 638
++ + Y P+ W+ + +A +L+ ML NP R E L HP+LE+
Sbjct: 262 NLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHPYLEQ 320
>pdb|3ORN|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4987655 And Mgamp-Pnp
pdb|3OS3|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4858061 And Mgatp
Length = 307
Score = 91.7 bits (226), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 71/267 (26%), Positives = 129/267 (48%), Gaps = 20/267 (7%)
Query: 385 IGDGNFAVVRQVYDKHKDMDCALKIIDKSKLLGKKQMIENEVNILRSVNHPNIIKLLDEY 444
+G GN VV +V K + A K+I + I E+ +L N P I+ +
Sbjct: 14 LGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAF 73
Query: 445 DTNNELYLVIELIKGGDLFDAISKNVKFSEEDSKFMTQSLASALSYLHDNY-IVHRDIKP 503
++ E+ + +E + GG L + K + E+ ++ ++ L+YL + + I+HRD+KP
Sbjct: 74 YSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYLREKHKIMHRDVKP 133
Query: 504 ENLLVEMSGCHVKVLKVGDFGLAQRVLRPMF-TVCGTPTYVAPEILNESGYGVKIDVWAA 562
N+LV G +K+ DFG++ +++ M + GT +Y++PE L + Y V+ D+W+
Sbjct: 134 SNILVNSRG----EIKLCDFGVSGQLIDSMANSFVGTRSYMSPERLQGTHYSVQSDIWSM 189
Query: 563 GVILYILLCGFPPFVSDTNDQD--------ELFDDILSGQYGFPSPYWDD--ISEEAKEL 612
G+ L + G P +D EL D I++ P P S E ++
Sbjct: 190 GLSLVEMAVGRYPIPPPDAKEDSRPPMAIFELLDYIVNE----PPPKLPSGVFSLEFQDF 245
Query: 613 ISHMLESNPDLRFSAEDVLDHPWLERS 639
++ L NP R + ++ H +++RS
Sbjct: 246 VNKCLIKNPAERADLKQLMVHAFIKRS 272
>pdb|2Z7L|A Chain A, Unphosphorylated Mitogen Activated Protein Kinase Erk2 In
Complex With
(4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin
2-Yl]amino}phenyl)acetic Acid
Length = 366
Score = 91.7 bits (226), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 86/299 (28%), Positives = 133/299 (44%), Gaps = 45/299 (15%)
Query: 378 RYSVGQIIGDGNFAVVRQVYDKHKDMDCALKIIDKSKLLGKKQMIENEVNILRSVNHPNI 437
RY+ IG+G + +V YD + A+K I + Q E+ IL H NI
Sbjct: 30 RYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENI 89
Query: 438 IKLLD-----EYDTNNELYLVIELIKGGDLFDAISKNVKFSEEDSKFMTQSLASALSYLH 492
I + D + ++Y+V +L++ DL+ + K S + + + L Y+H
Sbjct: 90 IGINDIIRAPTIEQMKDVYIVQDLMET-DLYKLL-KTQHLSNDHICYFLYQILRGLKYIH 147
Query: 493 DNYIVHRDIKPENLLVEMSGCHVKVLKVGDFGLAQRVLRP-------MFTVCGTPTYVAP 545
++HRD+KP NLL+ + C LK+ DFGLA RV P + T Y AP
Sbjct: 148 SANVLHRDLKPSNLLLNTT-CD---LKICDFGLA-RVADPDHDHTGFLTEYVATRWYRAP 202
Query: 546 EI-LNESGYGVKIDVWAAGVILYILLCGFPPF--------------VSDTNDQDEL--FD 588
EI LN GY ID+W+ G IL +L P F + + Q++L
Sbjct: 203 EIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCII 262
Query: 589 DILSGQYGFPSPY-----WDDI----SEEAKELISHMLESNPDLRFSAEDVLDHPWLER 638
++ + Y P+ W+ + +A +L+ ML NP R E L HP+LE+
Sbjct: 263 NLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHPYLEQ 321
>pdb|3C9W|A Chain A, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
pdb|3C9W|B Chain B, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
Length = 357
Score = 91.7 bits (226), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 86/299 (28%), Positives = 133/299 (44%), Gaps = 45/299 (15%)
Query: 378 RYSVGQIIGDGNFAVVRQVYDKHKDMDCALKIIDKSKLLGKKQMIENEVNILRSVNHPNI 437
RY+ IG+G + +V YD + A+K I + Q E+ IL H NI
Sbjct: 21 RYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENI 80
Query: 438 IKLLD-----EYDTNNELYLVIELIKGGDLFDAISKNVKFSEEDSKFMTQSLASALSYLH 492
I + D + ++Y+V +L++ DL+ + K S + + + L Y+H
Sbjct: 81 IGINDIIRAPTIEQMKDVYIVQDLMET-DLYKLL-KTQHLSNDHICYFLYQILRGLKYIH 138
Query: 493 DNYIVHRDIKPENLLVEMSGCHVKVLKVGDFGLAQRVLRP-------MFTVCGTPTYVAP 545
++HRD+KP NLL+ + C LK+ DFGLA RV P + T Y AP
Sbjct: 139 SANVLHRDLKPSNLLLNTT-CD---LKICDFGLA-RVADPDHDHTGFLTEYVATRWYRAP 193
Query: 546 EI-LNESGYGVKIDVWAAGVILYILLCGFPPF--------------VSDTNDQDEL--FD 588
EI LN GY ID+W+ G IL +L P F + + Q++L
Sbjct: 194 EIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCII 253
Query: 589 DILSGQYGFPSPY-----WDDI----SEEAKELISHMLESNPDLRFSAEDVLDHPWLER 638
++ + Y P+ W+ + +A +L+ ML NP R E L HP+LE+
Sbjct: 254 NLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHPYLEQ 312
>pdb|2FYS|B Chain B, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|2FYS|A Chain A, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|1ERK|A Chain A, Structure Of Signal-Regulated Kinase
pdb|3ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2SB220025
pdb|4ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2OLOMOUCINE
pdb|3QYI|A Chain A, Map Kinase Erk2 Complexed With
1,1-Dioxo-2,3-Dihydrothiophen-3-Yl Benzenesulfonate
Length = 364
Score = 91.7 bits (226), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 86/299 (28%), Positives = 133/299 (44%), Gaps = 45/299 (15%)
Query: 378 RYSVGQIIGDGNFAVVRQVYDKHKDMDCALKIIDKSKLLGKKQMIENEVNILRSVNHPNI 437
RY+ IG+G + +V YD + A+K I + Q E+ IL H NI
Sbjct: 28 RYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENI 87
Query: 438 IKLLD-----EYDTNNELYLVIELIKGGDLFDAISKNVKFSEEDSKFMTQSLASALSYLH 492
I + D + ++Y+V +L++ DL+ + K S + + + L Y+H
Sbjct: 88 IGINDIIRAPTIEQMKDVYIVQDLMET-DLYKLL-KTQHLSNDHICYFLYQILRGLKYIH 145
Query: 493 DNYIVHRDIKPENLLVEMSGCHVKVLKVGDFGLAQRVLRP-------MFTVCGTPTYVAP 545
++HRD+KP NLL+ + C LK+ DFGLA RV P + T Y AP
Sbjct: 146 SANVLHRDLKPSNLLLNTT-CD---LKICDFGLA-RVADPDHDHTGFLTEYVATRWYRAP 200
Query: 546 EI-LNESGYGVKIDVWAAGVILYILLCGFPPF--------------VSDTNDQDEL--FD 588
EI LN GY ID+W+ G IL +L P F + + Q++L
Sbjct: 201 EIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCII 260
Query: 589 DILSGQYGFPSPY-----WDDI----SEEAKELISHMLESNPDLRFSAEDVLDHPWLER 638
++ + Y P+ W+ + +A +L+ ML NP R E L HP+LE+
Sbjct: 261 NLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHPYLEQ 319
>pdb|4AAA|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain
pdb|4BBM|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
pdb|4BBM|B Chain B, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
Length = 331
Score = 91.7 bits (226), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 71/229 (31%), Positives = 117/229 (51%), Gaps = 18/229 (7%)
Query: 367 ENLNIPSKLLQRYSVGQIIGDGNFAVVRQVYDKHKDMDCALKII---DKSKLLGKKQMIE 423
ENL S +++Y ++G+G++ +V + +K A+K D K++ K M
Sbjct: 17 ENLYFQS--MEKYENLGLVGEGSYGMVMKCRNKDTGRIVAIKKFLESDDDKMVKKIAM-- 72
Query: 424 NEVNILRSVNHPNIIKLLDEYDTNNELYLVIELIKGGDLFD-AISKNVKFSEEDSKFMTQ 482
E+ +L+ + H N++ LL+ YLV E + L D + N + K++ Q
Sbjct: 73 REIKLLKQLRHENLVNLLEVCKKKKRWYLVFEFVDHTILDDLELFPNGLDYQVVQKYLFQ 132
Query: 483 SLASALSYLHDNYIVHRDIKPENLLVEMSGCHVKVLKVGDFGLAQRVLRPMFTV---CGT 539
+ + + + H + I+HRDIKPEN+LV SG V+K+ DFG A+ + P T
Sbjct: 133 -IINGIGFCHSHNIIHRDIKPENILVSQSG----VVKLCDFGFARTLAAPGEVYDDEVAT 187
Query: 540 PTYVAPEIL-NESGYGVKIDVWAAGVILYILLCGFPPFVSDTNDQDELF 587
Y APE+L + YG +DVWA G ++ + G P F D+ D D+L+
Sbjct: 188 RWYRAPELLVGDVKYGKAVDVWAIGCLVTEMFMGEPLFPGDS-DIDQLY 235
>pdb|3IDP|A Chain A, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
pdb|3IDP|B Chain B, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
Length = 300
Score = 91.3 bits (225), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 75/257 (29%), Positives = 129/257 (50%), Gaps = 28/257 (10%)
Query: 357 RCATATIKRRE---NLNIPSKLLQRYSVGQIIGDGNFAVVRQVYDKHKDMDCALKIIDKS 413
R T+ RR+ + IP + +VGQ IG G+F V Y D A+K+++ +
Sbjct: 8 RNRMKTLGRRDSSDDWEIPDGQI---TVGQRIGSGSFGTV---YKGKWHGDVAVKMLNVT 61
Query: 414 KLLGKK-QMIENEVNILRSVNHPNIIKLLDEYDTNNELYLVIELIKGGDLFDAISK-NVK 471
++ Q +NEV +LR H NI+ L Y T +L +V + +G L+ + K
Sbjct: 62 APTPQQLQAFKNEVGVLRKTRHVNIL-LFMGYSTKPQLAIVTQWCEGSSLYHHLHIIETK 120
Query: 472 FSEEDSKFMTQSLASALSYLHDNYIVHRDIKPENLLVEMSGCHVKVLKVGDFGLAQRVLR 531
F + + A + YLH I+HRD+K N+ + +K+GDFGLA R
Sbjct: 121 FEMIKLIDIARQTAQGMDYLHAKSIIHRDLKSNNIFLHED----LTVKIGDFGLATEKSR 176
Query: 532 -----PMFTVCGTPTYVAPEIL---NESGYGVKIDVWAAGVILYILLCGFPPFVSDTNDQ 583
+ G+ ++APE++ +++ Y + DV+A G++LY L+ G P+ S+ N++
Sbjct: 177 WSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPY-SNINNR 235
Query: 584 DELFDDILSGQYGFPSP 600
D++ + G+ G+ SP
Sbjct: 236 DQII--FMVGR-GYLSP 249
>pdb|3D83|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
pdb|3IPH|A Chain A, Crystal Structure Of P38 In Complex With A Biphenylamide
Inhibitor
Length = 360
Score = 91.3 bits (225), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 67/210 (31%), Positives = 104/210 (49%), Gaps = 19/210 (9%)
Query: 377 QRYSVGQIIGDGNFAVVRQVYDKHKDMDCALKIIDK--SKLLGKKQMIENEVNILRSVNH 434
+RY +G G + V +D + A+K + + ++ K+ E+ +L+ + H
Sbjct: 22 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKH 80
Query: 435 PNIIKLLDEY------DTNNELYLVIELIKGGDLFDAISKNVKFSEEDSKFMTQSLASAL 488
N+I LLD + + N++YLV L+ G DL + I K K +++ +F+ + L
Sbjct: 81 ENVIGLLDVFTPARSLEEFNDVYLVTHLM-GADL-NNIVKXQKLTDDHVQFLIYQILRGL 138
Query: 489 SYLHDNYIVHRDIKPENLLVEMSGCHVKVLKVGDFGLAQRVLRPMFTVCGTPTYVAPEI- 547
Y+H I+HRD+KP NL V LK+ DFGLA+ M T Y APEI
Sbjct: 139 KYIHSADIIHRDLKPSNLAVNED----XELKILDFGLARHTDDEMTGYVATRWYRAPEIM 194
Query: 548 LNESGYGVKIDVWAAGVILYILLCG---FP 574
LN Y +D+W+ G I+ LL G FP
Sbjct: 195 LNWMHYNQTVDIWSVGCIMAELLTGRTLFP 224
>pdb|4FV6|A Chain A, Crystal Structure Of The Erk2 Complexed With E57
Length = 360
Score = 91.3 bits (225), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 86/299 (28%), Positives = 133/299 (44%), Gaps = 45/299 (15%)
Query: 378 RYSVGQIIGDGNFAVVRQVYDKHKDMDCALKIIDKSKLLGKKQMIENEVNILRSVNHPNI 437
RY+ IG+G + +V YD + A+K I + Q E+ IL H NI
Sbjct: 24 RYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENI 83
Query: 438 IKLLD-----EYDTNNELYLVIELIKGGDLFDAISKNVKFSEEDSKFMTQSLASALSYLH 492
I + D + ++Y+V +L++ DL+ + K S + + + L Y+H
Sbjct: 84 IGINDIIRAPTIEQMKDVYIVQDLMET-DLYKLL-KTQHLSNDHICYFLYQILRGLKYIH 141
Query: 493 DNYIVHRDIKPENLLVEMSGCHVKVLKVGDFGLAQRVLRP-------MFTVCGTPTYVAP 545
++HRD+KP NLL+ + C LK+ DFGLA RV P + T Y AP
Sbjct: 142 SANVLHRDLKPSNLLLNTT-CD---LKICDFGLA-RVADPDHDHTGFLTEYVATRWYRAP 196
Query: 546 EI-LNESGYGVKIDVWAAGVILYILLCGFPPF--------------VSDTNDQDEL--FD 588
EI LN GY ID+W+ G IL +L P F + + Q++L
Sbjct: 197 EIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCII 256
Query: 589 DILSGQYGFPSPY-----WDDI----SEEAKELISHMLESNPDLRFSAEDVLDHPWLER 638
++ + Y P+ W+ + +A +L+ ML NP R E L HP+LE+
Sbjct: 257 NLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHPYLEQ 315
>pdb|2OJG|A Chain A, Crystal Structure Of Erk2 In Complex With
N,n-dimethyl-4-(4-
Phenyl-1h-pyrazol-3-yl)-1h-pyrrole-2-carboxamide
pdb|2OJI|A Chain A, Crystal Structure Of Erk2 In Complex With
N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2OJJ|A Chain A, Crystal Structure Of Erk2 In Complex With (S)-N-(1-(3-
Chloro-4-Fluorophenyl)-2-Hydroxyethyl)-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|3I5Z|A Chain A, Crystal Structure Of Erk2 Bound To
(S)-N-(2-Hydroxy-1-Phenylethyl)-4-
(5-Methyl-2-(Phenylamino)pyrimidin-4-Yl)-1h-Pyrrole-2-
Carboxamide
pdb|3I60|A Chain A, Crystal Structure Of Erk2 Bound To
(s)-4-(2-(2-chlorophenylamino)-5-
Methylpyrimidin-4-yl)-n-(2-hydroxy-1-phenylethyl)-1h-
pyrrole-2- Carboxamide
Length = 380
Score = 91.3 bits (225), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 86/299 (28%), Positives = 133/299 (44%), Gaps = 45/299 (15%)
Query: 378 RYSVGQIIGDGNFAVVRQVYDKHKDMDCALKIIDKSKLLGKKQMIENEVNILRSVNHPNI 437
RY+ IG+G + +V YD + A+K I + Q E+ IL H NI
Sbjct: 44 RYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENI 103
Query: 438 IKLLD-----EYDTNNELYLVIELIKGGDLFDAISKNVKFSEEDSKFMTQSLASALSYLH 492
I + D + ++Y+V +L++ DL+ + K S + + + L Y+H
Sbjct: 104 IGINDIIRAPTIEQMKDVYIVQDLMET-DLYKLL-KTQHLSNDHICYFLYQILRGLKYIH 161
Query: 493 DNYIVHRDIKPENLLVEMSGCHVKVLKVGDFGLAQRVLRP-------MFTVCGTPTYVAP 545
++HRD+KP NLL+ + C LK+ DFGLA RV P + T Y AP
Sbjct: 162 SANVLHRDLKPSNLLLNTT-CD---LKICDFGLA-RVADPDHDHTGFLTEYVATRWYRAP 216
Query: 546 EI-LNESGYGVKIDVWAAGVILYILLCGFPPF--------------VSDTNDQDEL--FD 588
EI LN GY ID+W+ G IL +L P F + + Q++L
Sbjct: 217 EIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCII 276
Query: 589 DILSGQYGFPSPY-----WDDI----SEEAKELISHMLESNPDLRFSAEDVLDHPWLER 638
++ + Y P+ W+ + +A +L+ ML NP R E L HP+LE+
Sbjct: 277 NLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHPYLEQ 335
>pdb|4IC7|A Chain A, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC7|D Chain D, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC8|A Chain A, Crystal Structure Of The Apo Erk5 Kinase Domain
pdb|4IC8|B Chain B, Crystal Structure Of The Apo Erk5 Kinase Domain
Length = 442
Score = 91.3 bits (225), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 87/328 (26%), Positives = 138/328 (42%), Gaps = 46/328 (14%)
Query: 351 TKTSVARCATATIKRRENLNIPSKLLQRYSVGQIIGDGNFAVVRQVYDKHKDMDCALKII 410
T SVA A +K R + ++ + Y + + IG+G + VV + A+K I
Sbjct: 30 TAASVAAKNLALLKAR-SFDVTFDVGDEYEIIETIGNGAYGVVSSARRRLTGQQVAIKKI 88
Query: 411 DKS-KLLGKKQMIENEVNILRSVNHPNIIKLLD------EYDTNNELYLVIELIKGGDLF 463
+ ++ + E+ IL+ H NII + D Y +Y+V++L++ DL
Sbjct: 89 PNAFDVVTNAKRTLRELKILKHFKHDNIIAIKDILRPTVPYGEFKSVYVVLDLMES-DLH 147
Query: 464 DAISKNVKFSEEDSKFMTQSLASALSYLHDNYIVHRDIKPENLLVEMSGCHVKVLKVGDF 523
I + + E ++ L L Y+H ++HRD+KP NLLV C LK+GDF
Sbjct: 148 QIIHSSQPLTLEHVRYFLYQLLRGLKYMHSAQVIHRDLKPSNLLVN-ENCE---LKIGDF 203
Query: 524 GLAQRVLRP-------MFTVCGTPTYVAPEI-LNESGYGVKIDVWAAGVI---------- 565
G+A+ + M T Y APE+ L+ Y ID+W+ G I
Sbjct: 204 GMARGLCTSPAEHQYFMTEYVATRWYRAPELMLSLHEYTQAIDLWSVGCIFGEMLARRQL 263
Query: 566 -----------LYILLCGFP-PFVSDTNDQDELFDDILSGQYGFPSPY---WDDISEEAK 610
L +++ G P P V + + I S P P+ + +A
Sbjct: 264 FPGKNYVHQLQLIMMVLGTPSPAVIQAVGAERVRAYIQSLPPRQPVPWETVYPGADRQAL 323
Query: 611 ELISHMLESNPDLRFSAEDVLDHPWLER 638
L+ ML P R SA L HP+L +
Sbjct: 324 SLLGRMLRFEPSARISAAAALRHPFLAK 351
>pdb|2Y8O|A Chain A, Crystal Structure Of Human P38alpha Complexed With A Mapk
Docking Peptide
Length = 362
Score = 91.3 bits (225), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 70/225 (31%), Positives = 110/225 (48%), Gaps = 19/225 (8%)
Query: 362 TIKRRENLNIPSKLLQRYSVGQIIGDGNFAVVRQVYDKHKDMDCALKIIDK--SKLLGKK 419
T R+E ++ +RY +G G + V +D + A+K + + ++ K
Sbjct: 9 TFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAK 68
Query: 420 QMIENEVNILRSVNHPNIIKLLDEY------DTNNELYLVIELIKGGDLFDAISKNVKFS 473
+ E+ +L+ + H N+I LLD + + N++YLV L+ G DL + I K K +
Sbjct: 69 RTYR-ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLM-GADL-NNIVKCQKLT 125
Query: 474 EEDSKFMTQSLASALSYLHDNYIVHRDIKPENLLVEMSGCHVKVLKVGDFGLAQRVLRPM 533
++ +F+ + L Y+H I+HRD+KP NL V LK+ DFGLA+ M
Sbjct: 126 DDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDS----ELKILDFGLARHTDDEM 181
Query: 534 FTVCGTPTYVAPEI-LNESGYGVKIDVWAAGVILYILLCG---FP 574
T Y APEI LN Y +D+W+ G I+ LL G FP
Sbjct: 182 TGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFP 226
>pdb|3O8P|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
pdb|3MPA|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 91.3 bits (225), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 70/225 (31%), Positives = 111/225 (49%), Gaps = 19/225 (8%)
Query: 362 TIKRRENLNIPSKLLQRYSVGQIIGDGNFAVVRQVYDKHKDMDCALKIIDK--SKLLGKK 419
T R+E ++ +RY +G G + V +D + A+K + + ++ K
Sbjct: 7 TFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAK 66
Query: 420 QMIENEVNILRSVNHPNIIKLLDEY------DTNNELYLVIELIKGGDLFDAISKNVKFS 473
+ E+ +L+ + H N+I LLD + + N++YLV L+ G DL + I K K +
Sbjct: 67 RTYR-ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLM-GADL-NNIVKCQKLT 123
Query: 474 EEDSKFMTQSLASALSYLHDNYIVHRDIKPENLLVEMSGCHVKVLKVGDFGLAQRVLRPM 533
++ +F+ + L Y+H I+HRD+KP NL V C +K+L FGLA+ M
Sbjct: 124 DDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVN-EDCELKIL---GFGLARHTDDEM 179
Query: 534 FTVCGTPTYVAPEI-LNESGYGVKIDVWAAGVILYILLCG---FP 574
T Y APEI LN Y +D+W+ G I+ LL G FP
Sbjct: 180 TGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFP 224
>pdb|1OVE|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydroquinolinone
pdb|1R3C|A Chain A, The Structure Of P38alpha C162s Mutant
pdb|2I0H|A Chain A, The Structure Of P38alpha In Complex With An
Arylpyridazinone
pdb|3GC7|A Chain A, The Structure Of P38alpha In Complex With A
Dihydroquinazolinone
pdb|3NEW|A Chain A, P38-Alpha Complexed With Compound 10
Length = 366
Score = 91.3 bits (225), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 70/225 (31%), Positives = 110/225 (48%), Gaps = 19/225 (8%)
Query: 362 TIKRRENLNIPSKLLQRYSVGQIIGDGNFAVVRQVYDKHKDMDCALKIIDK--SKLLGKK 419
T R+E ++ +RY +G G + V +D + A+K + + ++ K
Sbjct: 13 TFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAK 72
Query: 420 QMIENEVNILRSVNHPNIIKLLDEY------DTNNELYLVIELIKGGDLFDAISKNVKFS 473
+ E+ +L+ + H N+I LLD + + N++YLV L+ G DL + I K K +
Sbjct: 73 RTYR-ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLM-GADL-NNIVKCQKLT 129
Query: 474 EEDSKFMTQSLASALSYLHDNYIVHRDIKPENLLVEMSGCHVKVLKVGDFGLAQRVLRPM 533
++ +F+ + L Y+H I+HRD+KP NL V LK+ DFGLA+ M
Sbjct: 130 DDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDS----ELKILDFGLARHTDDEM 185
Query: 534 FTVCGTPTYVAPEI-LNESGYGVKIDVWAAGVILYILLCG---FP 574
T Y APEI LN Y +D+W+ G I+ LL G FP
Sbjct: 186 TGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFP 230
>pdb|1UV5|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With
6-Bromoindirubin-3'-Oxime
Length = 350
Score = 90.9 bits (224), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 79/270 (29%), Positives = 129/270 (47%), Gaps = 37/270 (13%)
Query: 379 YSVGQIIGDGNFAVVRQVYDKHKDMDCALKIIDKSKLLGKKQMIENEVNILRSVNHPNII 438
Y+ ++IG+G+F VV Q K D +++ K+L K E+ I+R ++H NI+
Sbjct: 22 YTDTKVIGNGSFGVVYQA----KLCDSG-ELVAIKKVLQGKAFKNRELQIMRKLDHCNIV 76
Query: 439 KL----LDEYDTNNELYLVIELIKGGDLFDAISKNVKFSEED-----SKFMTQSLASALS 489
+L + +E+YL + L + ++++ +++ K L +L+
Sbjct: 77 RLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLA 136
Query: 490 YLHDNYIVHRDIKPENLLVEMSGCHVKVLKVGDFGLAQRVLR--PMFTVCGTPTYVAPE- 546
Y+H I HRDIKP+NLL++ VLK+ DFG A++++R P + + Y APE
Sbjct: 137 YIHSFGICHRDIKPQNLLLDPD---TAVLKLCDFGSAKQLVRGEPNVSYICSRYYRAPEL 193
Query: 547 ILNESGYGVKIDVWAAGVILYILLCGFPPFVSDTNDQDELFDDILSGQYGFPSPYWDDIS 606
I + Y IDVW+AG +L LL G P F D+ D+L + I +
Sbjct: 194 IFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSG-VDQLVEII------------KVLG 240
Query: 607 EEAKELISHMLESNPDL-RFSAEDVLDHPW 635
+E I M NP+ F + HPW
Sbjct: 241 TPTREQIREM---NPNYTEFKFPQIKAHPW 267
>pdb|1WZY|A Chain A, Crystal Structure Of Human Erk2 Complexed With A
Pyrazolopyridazine Derivative
pdb|3W55|A Chain A, The Structure Of Erk2 In Complex With Fr148083
Length = 368
Score = 90.9 bits (224), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 86/299 (28%), Positives = 133/299 (44%), Gaps = 45/299 (15%)
Query: 378 RYSVGQIIGDGNFAVVRQVYDKHKDMDCALKIIDKSKLLGKKQMIENEVNILRSVNHPNI 437
RY+ IG+G + +V YD + A+K I + Q E+ IL H NI
Sbjct: 32 RYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENI 91
Query: 438 IKLLD-----EYDTNNELYLVIELIKGGDLFDAISKNVKFSEEDSKFMTQSLASALSYLH 492
I + D + ++Y+V +L++ DL+ + K S + + + L Y+H
Sbjct: 92 IGINDIIRAPTIEQMKDVYIVQDLMET-DLYKLL-KTQHLSNDHICYFLYQILRGLKYIH 149
Query: 493 DNYIVHRDIKPENLLVEMSGCHVKVLKVGDFGLAQRVLRP-------MFTVCGTPTYVAP 545
++HRD+KP NLL+ + C LK+ DFGLA RV P + T Y AP
Sbjct: 150 SANVLHRDLKPSNLLLNTT-CD---LKICDFGLA-RVADPDHDHTGFLTEYVATRWYRAP 204
Query: 546 EI-LNESGYGVKIDVWAAGVILYILLCGFPPF--------------VSDTNDQDEL--FD 588
EI LN GY ID+W+ G IL +L P F + + Q++L
Sbjct: 205 EIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCII 264
Query: 589 DILSGQYGFPSPY-----WDDI----SEEAKELISHMLESNPDLRFSAEDVLDHPWLER 638
++ + Y P+ W+ + +A +L+ ML NP R E L HP+LE+
Sbjct: 265 NLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHPYLEQ 323
>pdb|1TVO|A Chain A, The Structure Of Erk2 In Complex With A Small Molecule
Inhibitor
Length = 368
Score = 90.9 bits (224), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 86/299 (28%), Positives = 133/299 (44%), Gaps = 45/299 (15%)
Query: 378 RYSVGQIIGDGNFAVVRQVYDKHKDMDCALKIIDKSKLLGKKQMIENEVNILRSVNHPNI 437
RY+ IG+G + +V YD + A+K I + Q E+ IL H NI
Sbjct: 24 RYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENI 83
Query: 438 IKLLD-----EYDTNNELYLVIELIKGGDLFDAISKNVKFSEEDSKFMTQSLASALSYLH 492
I + D + ++Y+V +L++ DL+ + K S + + + L Y+H
Sbjct: 84 IGINDIIRAPTIEQMKDVYIVQDLMET-DLYKLL-KTQHLSNDHICYFLYQILRGLKYIH 141
Query: 493 DNYIVHRDIKPENLLVEMSGCHVKVLKVGDFGLAQRVLRP-------MFTVCGTPTYVAP 545
++HRD+KP NLL+ + C LK+ DFGLA RV P + T Y AP
Sbjct: 142 SANVLHRDLKPSNLLLNTT-CD---LKICDFGLA-RVADPDHDHTGFLTEYVATRWYRAP 196
Query: 546 EI-LNESGYGVKIDVWAAGVILYILLCGFPPF--------------VSDTNDQDEL--FD 588
EI LN GY ID+W+ G IL +L P F + + Q++L
Sbjct: 197 EIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCII 256
Query: 589 DILSGQYGFPSPY-----WDDI----SEEAKELISHMLESNPDLRFSAEDVLDHPWLER 638
++ + Y P+ W+ + +A +L+ ML NP R E L HP+LE+
Sbjct: 257 NLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHPYLEQ 315
>pdb|2W99|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
pdb|2W9Z|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 90.9 bits (224), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 88/298 (29%), Positives = 127/298 (42%), Gaps = 45/298 (15%)
Query: 378 RYSVGQIIGDGNFAVVRQVYDKHKDMDCALKIID-KSKLLGKKQMIENEVNILR---SVN 433
RY IG G + V + D H ALK + + G EV +LR +
Sbjct: 5 RYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGEEGLPISTVREVALLRRLEAFE 64
Query: 434 HPNIIKLLD-----EYDTNNELYLVIELIKGGDLFDAISKNVK--FSEEDSKFMTQSLAS 486
HPN+++L+D D ++ LV E + DL + K E K + +
Sbjct: 65 HPNVVRLMDVCATSRTDREIKVTLVFEHVDQ-DLRTYLDKAPPPGLPAETIKDLMRQFLR 123
Query: 487 ALSYLHDNYIVHRDIKPENLLVEMSGCHVKVLKVGDFGLA-----QRVLRPMFTVCGTPT 541
L +LH N IVHRD+KPEN+LV G +K+ DFGLA Q L P V T
Sbjct: 124 GLDFLHANCIVHRDLKPENILVTSGG----TVKLADFGLARIYSYQMALAP---VVVTLW 176
Query: 542 YVAPEILNESGYGVKIDVWAAGVILYILLCGFPPFV--SDTNDQDELFD----------- 588
Y APE+L +S Y +D+W+ G I + P F S+ + ++FD
Sbjct: 177 YRAPEVLLQSTYATPVDMWSVGCIFAEMFRRKPLFCGNSEADQLGKIFDLIGLPPEDDWP 236
Query: 589 -DILSGQYGFP-------SPYWDDISEEAKELISHMLESNPDLRFSAEDVLDHPWLER 638
D+ + FP ++ E +L+ ML NP R SA L H +L +
Sbjct: 237 RDVSLPRGAFPPRGPRPVQSVVPEMEESGAQLLLEMLTFNPHKRISAFRALQHSYLHK 294
>pdb|2BAL|A Chain A, P38alpha Map Kinase Bound To Pyrazoloamine
pdb|4AA5|A Chain A, P38alpha Map Kinase Bound To Cmpd 33
Length = 365
Score = 90.9 bits (224), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 66/209 (31%), Positives = 103/209 (49%), Gaps = 17/209 (8%)
Query: 377 QRYSVGQIIGDGNFAVVRQVYDKHKDMDCALKIIDKS-KLLGKKQMIENEVNILRSVNHP 435
+RY +G G + V +D + A+K + + + + + E+ +L+ + H
Sbjct: 27 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE 86
Query: 436 NIIKLLDEY------DTNNELYLVIELIKGGDLFDAISKNVKFSEEDSKFMTQSLASALS 489
N+I LLD + + N++YLV L+ G DL + I K K +++ +F+ + L
Sbjct: 87 NVIGLLDVFTPARSLEEFNDVYLVTHLM-GADL-NNIVKCQKLTDDHVQFLIYQILRGLK 144
Query: 490 YLHDNYIVHRDIKPENLLVEMSGCHVKVLKVGDFGLAQRVLRPMFTVCGTPTYVAPEI-L 548
Y+H I+HRD+KP NL V LK+ DFGLA+ M T Y APEI L
Sbjct: 145 YIHSADIIHRDLKPSNLAVNED----XELKILDFGLARHTDDEMTGYVATRWYRAPEIML 200
Query: 549 NESGYGVKIDVWAAGVILYILLCG---FP 574
N Y +D+W+ G I+ LL G FP
Sbjct: 201 NWMHYNQTVDIWSVGCIMAELLTGRTLFP 229
>pdb|3QYW|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|3QYZ|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|4GT3|A Chain A, Atp-Bound Form Of The Erk2 Kinase
pdb|4GVA|A Chain A, Adp-Bound Form Of The Erk2 Kinase
Length = 364
Score = 90.9 bits (224), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 85/299 (28%), Positives = 132/299 (44%), Gaps = 45/299 (15%)
Query: 378 RYSVGQIIGDGNFAVVRQVYDKHKDMDCALKIIDKSKLLGKKQMIENEVNILRSVNHPNI 437
RY+ IG+G + +V YD + A+K I + Q E+ IL H NI
Sbjct: 28 RYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENI 87
Query: 438 IKLLD-----EYDTNNELYLVIELIKGGDLFDAISKNVKFSEEDSKFMTQSLASALSYLH 492
I + D + ++Y+V +L++ DL+ + K S + + + L Y+H
Sbjct: 88 IGINDIIRAPTIEQMKDVYIVQDLMET-DLYKLL-KTQHLSNDHICYFLYQILRGLKYIH 145
Query: 493 DNYIVHRDIKPENLLVEMSGCHVKVLKVGDFGLAQRVLRP-------MFTVCGTPTYVAP 545
++HRD+KP NLL+ + LK+ DFGLA RV P + T Y AP
Sbjct: 146 SANVLHRDLKPSNLLLNTT----XDLKICDFGLA-RVADPDHDHTGFLTEYVATRWYRAP 200
Query: 546 EI-LNESGYGVKIDVWAAGVILYILLCGFPPF--------------VSDTNDQDEL--FD 588
EI LN GY ID+W+ G IL +L P F + + Q++L
Sbjct: 201 EIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCII 260
Query: 589 DILSGQYGFPSPY-----WDDI----SEEAKELISHMLESNPDLRFSAEDVLDHPWLER 638
++ + Y P+ W+ + +A +L+ ML NP R E L HP+LE+
Sbjct: 261 NLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHPYLEQ 319
>pdb|3MTL|A Chain A, Crystal Structure Of The Pctaire1 Kinase In Complex With
Ind E804
Length = 324
Score = 90.9 bits (224), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 81/289 (28%), Positives = 124/289 (42%), Gaps = 50/289 (17%)
Query: 385 IGDGNFAVVRQVYDKHKDMDCALKIIDKSKLLGKKQMIENEVNILRSVNHPNIIKLLDEY 444
+G+G +A V + K D ALK I G EV++L+ + H NI+ L D
Sbjct: 10 LGEGTYATVYKGKSKLTDNLVALKEIRLEHEEGAPCTAIREVSLLKDLKHANIVTLHDII 69
Query: 445 DTNNELYLVIELIKGGDLFDAISKNVKFSEEDS---------KFMTQSLASALSYLHDNY 495
T L LV F+ + K++K +D K L L+Y H
Sbjct: 70 HTEKSLTLV---------FEYLDKDLKQYLDDCGNIINMHNVKLFLFQLLRGLAYCHRQK 120
Query: 496 IVHRDIKPENLLVEMSGCHVKVLKVGDFGLAQRVLRPMFTV---CGTPTYVAPEI-LNES 551
++HRD+KP+NLL+ G LK+ DFGLA+ P T T Y P+I L +
Sbjct: 121 VLHRDLKPQNLLINERG----ELKLADFGLARAKSIPTKTYDNEVVTLWYRPPDILLGST 176
Query: 552 GYGVKIDVWAAGVILYILLCGFPPFVSDTNDQ-------------DELFDDILSGQ---- 594
Y +ID+W G I Y + G P F T ++ +E + ILS +
Sbjct: 177 DYSTQIDMWGVGCIFYEMATGRPLFPGSTVEEQLHFIFRILGTPTEETWPGILSNEEFKT 236
Query: 595 YGFPS-------PYWDDISEEAKELISHMLESNPDLRFSAEDVLDHPWL 636
Y +P + + + +L++ +L+ R SAED + HP+
Sbjct: 237 YNYPKYRAEALLSHAPRLDSDGADLLTKLLQFEGRNRISAEDAMKHPFF 285
>pdb|4FUX|A Chain A, Crystal Structure Of The Erk2 Complexed With E75
pdb|4FV1|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek4
pdb|4FV2|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek5
pdb|4FV3|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek6
pdb|4FV4|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek7
pdb|4FV5|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek9
pdb|4FV8|A Chain A, Crystal Structure Of The Erk2 Complexed With E63
pdb|4FV9|A Chain A, Crystal Structure Of The Erk2 Complexed With E71
pdb|4G6N|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 90.9 bits (224), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 85/299 (28%), Positives = 132/299 (44%), Gaps = 45/299 (15%)
Query: 378 RYSVGQIIGDGNFAVVRQVYDKHKDMDCALKIIDKSKLLGKKQMIENEVNILRSVNHPNI 437
RY+ IG+G + +V YD + A+K I + Q E+ IL H NI
Sbjct: 24 RYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENI 83
Query: 438 IKLLD-----EYDTNNELYLVIELIKGGDLFDAISKNVKFSEEDSKFMTQSLASALSYLH 492
I + D + ++Y+V +L++ DL+ + K S + + + L Y+H
Sbjct: 84 IGINDIIRAPTIEQMKDVYIVQDLMET-DLYKLL-KTQHLSNDHICYFLYQILRGLKYIH 141
Query: 493 DNYIVHRDIKPENLLVEMSGCHVKVLKVGDFGLAQRVLRP-------MFTVCGTPTYVAP 545
++HRD+KP NLL+ + LK+ DFGLA RV P + T Y AP
Sbjct: 142 SANVLHRDLKPSNLLLNTT----XDLKICDFGLA-RVADPDHDHTGFLTEYVATRWYRAP 196
Query: 546 EI-LNESGYGVKIDVWAAGVILYILLCGFPPF--------------VSDTNDQDEL--FD 588
EI LN GY ID+W+ G IL +L P F + + Q++L
Sbjct: 197 EIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCII 256
Query: 589 DILSGQYGFPSPY-----WDDI----SEEAKELISHMLESNPDLRFSAEDVLDHPWLER 638
++ + Y P+ W+ + +A +L+ ML NP R E L HP+LE+
Sbjct: 257 NLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHPYLEQ 315
>pdb|1O9U|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide
Length = 350
Score = 90.9 bits (224), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 79/270 (29%), Positives = 129/270 (47%), Gaps = 37/270 (13%)
Query: 379 YSVGQIIGDGNFAVVRQVYDKHKDMDCALKIIDKSKLLGKKQMIENEVNILRSVNHPNII 438
Y+ ++IG+G+F VV Q K D +++ K+L K E+ I+R ++H NI+
Sbjct: 22 YTDTKVIGNGSFGVVYQA----KLCDSG-ELVAIKKVLQGKAFKNRELQIMRKLDHCNIV 76
Query: 439 KL----LDEYDTNNELYLVIELIKGGDLFDAISKNVKFSEED-----SKFMTQSLASALS 489
+L + +E+YL + L ++++ +++ K L +L+
Sbjct: 77 RLRYFFYSSGEKKDEVYLNLVLDYVPATVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLA 136
Query: 490 YLHDNYIVHRDIKPENLLVEMSGCHVKVLKVGDFGLAQRVLR--PMFTVCGTPTYVAPE- 546
Y+H I HRDIKP+NLL++ VLK+ DFG A++++R P + + Y APE
Sbjct: 137 YIHSFGICHRDIKPQNLLLDPD---TAVLKLCDFGSAKQLVRGEPNVSXICSRYYRAPEL 193
Query: 547 ILNESGYGVKIDVWAAGVILYILLCGFPPFVSDTNDQDELFDDILSGQYGFPSPYWDDIS 606
I + Y IDVW+AG +L LL G P F D+ D+L + I +
Sbjct: 194 IFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSG-VDQLVEII------------KVLG 240
Query: 607 EEAKELISHMLESNPDL-RFSAEDVLDHPW 635
+E I M NP+ F+ + HPW
Sbjct: 241 TPTREQIREM---NPNYTEFAFPQIKAHPW 267
>pdb|3F88|A Chain A, Glycogen Synthase Kinase 3beta Inhibitor Complex
pdb|3F88|B Chain B, Glycogen Synthase Kinase 3beta Inhibitor Complex
Length = 349
Score = 90.9 bits (224), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 79/270 (29%), Positives = 131/270 (48%), Gaps = 37/270 (13%)
Query: 379 YSVGQIIGDGNFAVVRQVYDKHKDMDCALKIIDKSKLLGKKQMIENEVNILRSVNHPNII 438
Y+ ++IG+G+F VV Q K D +++ K+L K+ E+ I+R ++H NI+
Sbjct: 22 YTDTKVIGNGSFGVVYQA----KLCDSG-ELVAIKKVLQDKRFKNRELQIMRKLDHCNIV 76
Query: 439 KLLDEYDTNNE----LYLVIELIKGGDLFDAISKNVKFSEED-----SKFMTQSLASALS 489
+L + ++ E +YL + L + ++++ +++ K L +L+
Sbjct: 77 RLRYFFYSSGEKKDVVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLA 136
Query: 490 YLHDNYIVHRDIKPENLLVEMSGCHVKVLKVGDFGLAQRVLR--PMFTVCGTPTYVAPE- 546
Y+H I HRDIKP+NLL++ VLK+ DFG A++++R P + + Y APE
Sbjct: 137 YIHSFGICHRDIKPQNLLLDPD---TAVLKLCDFGSAKQLVRGEPNVSXICSRYYRAPEL 193
Query: 547 ILNESGYGVKIDVWAAGVILYILLCGFPPFVSDTNDQDELFDDILSGQYGFPSPYWDDIS 606
I + Y IDVW+AG +L LL G P F D+ D+L + I +
Sbjct: 194 IFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSG-VDQLVEII------------KVLG 240
Query: 607 EEAKELISHMLESNPDL-RFSAEDVLDHPW 635
+E I M NP+ F + HPW
Sbjct: 241 TPTREQIREM---NPNYTEFKFPQIKAHPW 267
>pdb|3T8O|A Chain A, Rhodopsin Kinase (grk1) L166k Mutant At 2.5a Resolution
Length = 543
Score = 90.5 bits (223), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 71/258 (27%), Positives = 118/258 (45%), Gaps = 19/258 (7%)
Query: 383 QIIGDGNFAVVR--QVYDKHKDMDCALKIIDKSKLLGKKQMIENEVNILRSVNHPNIIKL 440
+++G G F V Q+ K C + K Q E IL V+ I+ L
Sbjct: 191 RVLGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKVHSRFIVSL 250
Query: 441 LDEYDTNNELYLVIELIKGGDL----FDAISKNVKFSEEDSKFMTQSLASALSYLHDNYI 496
++T +L LV+ ++ GGD+ ++ N F E + F T + S L +LH I
Sbjct: 251 AYAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVSGLEHLHQRNI 310
Query: 497 VHRDIKPENLLVEMSGCHVKVLKVGDFGLAQRVLRPMFTV---CGTPTYVAPEILNESGY 553
++RD+KPEN+L++ G +++ D GLA + GTP ++APE+L Y
Sbjct: 311 IYRDLKPENVLLDDDGN----VRISDLGLAVELKAGQTKTKGYAGTPGFMAPELLLGEEY 366
Query: 554 GVKIDVWAAGVILYILLCGFPPFVS--DTNDQDELFDDILSGQYGFPSPYWDDISEEAKE 611
+D +A GV LY ++ PF + + + EL +L +P D S +K+
Sbjct: 367 DFSVDYFALGVTLYEMIAARGPFRARGEKVENKELKQRVLEQAVTYP----DKFSPASKD 422
Query: 612 LISHMLESNPDLRFSAED 629
+L+ +P+ R D
Sbjct: 423 FCEALLQKDPEKRLGFRD 440
>pdb|3SA0|A Chain A, Complex Of Erk2 With Norathyriol
pdb|4FUY|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek2
pdb|4FV0|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek3
Length = 360
Score = 90.5 bits (223), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 85/299 (28%), Positives = 132/299 (44%), Gaps = 45/299 (15%)
Query: 378 RYSVGQIIGDGNFAVVRQVYDKHKDMDCALKIIDKSKLLGKKQMIENEVNILRSVNHPNI 437
RY+ IG+G + +V YD + A+K I + Q E+ IL H NI
Sbjct: 24 RYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENI 83
Query: 438 IKLLD-----EYDTNNELYLVIELIKGGDLFDAISKNVKFSEEDSKFMTQSLASALSYLH 492
I + D + ++Y+V +L++ DL+ + K S + + + L Y+H
Sbjct: 84 IGINDIIRAPTIEQMKDVYIVQDLMET-DLYKLL-KTQHLSNDHICYFLYQILRGLKYIH 141
Query: 493 DNYIVHRDIKPENLLVEMSGCHVKVLKVGDFGLAQRVLRP-------MFTVCGTPTYVAP 545
++HRD+KP NLL+ + LK+ DFGLA RV P + T Y AP
Sbjct: 142 SANVLHRDLKPSNLLLNTT----XDLKIXDFGLA-RVADPDHDHTGFLTEYVATRWYRAP 196
Query: 546 EI-LNESGYGVKIDVWAAGVILYILLCGFPPF--------------VSDTNDQDEL--FD 588
EI LN GY ID+W+ G IL +L P F + + Q++L
Sbjct: 197 EIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNXII 256
Query: 589 DILSGQYGFPSPY-----WDDI----SEEAKELISHMLESNPDLRFSAEDVLDHPWLER 638
++ + Y P+ W+ + +A +L+ ML NP R E L HP+LE+
Sbjct: 257 NLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHPYLEQ 315
>pdb|1UWJ|A Chain A, The Complex Of Mutant V599e B-raf And Bay439006
pdb|1UWJ|B Chain B, The Complex Of Mutant V599e B-raf And Bay439006
Length = 276
Score = 90.5 bits (223), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 69/231 (29%), Positives = 119/231 (51%), Gaps = 22/231 (9%)
Query: 380 SVGQIIGDGNFAVVRQVYDKHKDMDCALKIIDKSKLLGKK-QMIENEVNILRSVNHPNII 438
+VGQ IG G+F V Y D A+K+++ + ++ Q +NEV +LR H NI+
Sbjct: 11 TVGQRIGSGSFGTV---YKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNIL 67
Query: 439 KLLDEYDTNNELYLVIELIKGGDLFDAISK-NVKFSEEDSKFMTQSLASALSYLHDNYIV 497
L Y T +L +V + +G L+ + KF + + A + YLH I+
Sbjct: 68 -LFMGYSTKPQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHAKSII 126
Query: 498 HRDIKPENLLVEMSGCHVKVLKVGDFGLAQRVLR-----PMFTVCGTPTYVAPEIL---N 549
HRD+K N+ + +K+GDFGLA R + G+ ++APE++ +
Sbjct: 127 HRDLKSNNIFLHED----LTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIRMQD 182
Query: 550 ESGYGVKIDVWAAGVILYILLCGFPPFVSDTNDQDELFDDILSGQYGFPSP 600
++ Y + DV+A G++LY L+ G P+ S+ N++D++ + G+ G+ SP
Sbjct: 183 KNPYSFQSDVYAFGIVLYELMTGQLPY-SNINNRDQII--FMVGR-GYLSP 229
>pdb|4FV7|A Chain A, Crystal Structure Of The Erk2 Complexed With E94
pdb|4G6O|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 90.5 bits (223), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 85/299 (28%), Positives = 132/299 (44%), Gaps = 45/299 (15%)
Query: 378 RYSVGQIIGDGNFAVVRQVYDKHKDMDCALKIIDKSKLLGKKQMIENEVNILRSVNHPNI 437
RY+ IG+G + +V YD + A+K I + Q E+ IL H NI
Sbjct: 24 RYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENI 83
Query: 438 IKLLD-----EYDTNNELYLVIELIKGGDLFDAISKNVKFSEEDSKFMTQSLASALSYLH 492
I + D + ++Y+V +L++ DL+ + K S + + + L Y+H
Sbjct: 84 IGINDIIRAPTIEQMKDVYIVQDLMET-DLYKLL-KTQHLSNDHICYFLYQILRGLKYIH 141
Query: 493 DNYIVHRDIKPENLLVEMSGCHVKVLKVGDFGLAQRVLRP-------MFTVCGTPTYVAP 545
++HRD+KP NLL+ + LK+ DFGLA RV P + T Y AP
Sbjct: 142 SANVLHRDLKPSNLLLNTT----XDLKICDFGLA-RVADPDHDHTGFLTEYVATRWYRAP 196
Query: 546 EI-LNESGYGVKIDVWAAGVILYILLCGFPPF--------------VSDTNDQDEL--FD 588
EI LN GY ID+W+ G IL +L P F + + Q++L
Sbjct: 197 EIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNXII 256
Query: 589 DILSGQYGFPSPY-----WDDI----SEEAKELISHMLESNPDLRFSAEDVLDHPWLER 638
++ + Y P+ W+ + +A +L+ ML NP R E L HP+LE+
Sbjct: 257 NLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHPYLEQ 315
>pdb|3QC9|A Chain A, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|B Chain B, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|C Chain C, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|D Chain D, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
Length = 543
Score = 90.5 bits (223), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 71/258 (27%), Positives = 118/258 (45%), Gaps = 19/258 (7%)
Query: 383 QIIGDGNFAVVR--QVYDKHKDMDCALKIIDKSKLLGKKQMIENEVNILRSVNHPNIIKL 440
+++G G F V Q+ K C + K Q E IL V+ I+ L
Sbjct: 191 RVLGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKVHSRFIVSL 250
Query: 441 LDEYDTNNELYLVIELIKGGDL----FDAISKNVKFSEEDSKFMTQSLASALSYLHDNYI 496
++T +L LV+ ++ GGD+ ++ N F E + F T + S L +LH I
Sbjct: 251 AYAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVSGLEHLHQRNI 310
Query: 497 VHRDIKPENLLVEMSGCHVKVLKVGDFGLAQRVLRPMFTV---CGTPTYVAPEILNESGY 553
++RD+KPEN+L++ G +++ D GLA + GTP ++APE+L Y
Sbjct: 311 IYRDLKPENVLLDDDG----NVRISDLGLAVELKAGQTKTKGYAGTPGFMAPELLLGEEY 366
Query: 554 GVKIDVWAAGVILYILLCGFPPFVS--DTNDQDELFDDILSGQYGFPSPYWDDISEEAKE 611
+D +A GV LY ++ PF + + + EL +L +P D S +K+
Sbjct: 367 DFSVDYFALGVTLYEMIAARGPFRARGEKVENKELKQRVLEQAVTYP----DKFSPASKD 422
Query: 612 LISHMLESNPDLRFSAED 629
+L+ +P+ R D
Sbjct: 423 FCEALLQKDPEKRLGFRD 440
>pdb|3C4X|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4X|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4Y|A Chain A, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Y|B Chain B, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Z|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 1.84a
pdb|3C50|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C50|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C51|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
pdb|3C51|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
Length = 543
Score = 90.5 bits (223), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 71/258 (27%), Positives = 118/258 (45%), Gaps = 19/258 (7%)
Query: 383 QIIGDGNFAVVR--QVYDKHKDMDCALKIIDKSKLLGKKQMIENEVNILRSVNHPNIIKL 440
+++G G F V Q+ K C + K Q E IL V+ I+ L
Sbjct: 191 RVLGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKVHSRFIVSL 250
Query: 441 LDEYDTNNELYLVIELIKGGDL----FDAISKNVKFSEEDSKFMTQSLASALSYLHDNYI 496
++T +L LV+ ++ GGD+ ++ N F E + F T + S L +LH I
Sbjct: 251 AYAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVSGLEHLHQRNI 310
Query: 497 VHRDIKPENLLVEMSGCHVKVLKVGDFGLAQRVLRPMFTV---CGTPTYVAPEILNESGY 553
++RD+KPEN+L++ G +++ D GLA + GTP ++APE+L Y
Sbjct: 311 IYRDLKPENVLLDDDGN----VRISDLGLAVELKAGQTKTKGYAGTPGFMAPELLLGEEY 366
Query: 554 GVKIDVWAAGVILYILLCGFPPFVS--DTNDQDELFDDILSGQYGFPSPYWDDISEEAKE 611
+D +A GV LY ++ PF + + + EL +L +P D S +K+
Sbjct: 367 DFSVDYFALGVTLYEMIAARGPFRARGEKVENKELKQRVLEQAVTYP----DKFSPASKD 422
Query: 612 LISHMLESNPDLRFSAED 629
+L+ +P+ R D
Sbjct: 423 FCEALLQKDPEKRLGFRD 440
>pdb|3C4W|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
pdb|3C4W|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
Length = 543
Score = 90.5 bits (223), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 71/258 (27%), Positives = 118/258 (45%), Gaps = 19/258 (7%)
Query: 383 QIIGDGNFAVVR--QVYDKHKDMDCALKIIDKSKLLGKKQMIENEVNILRSVNHPNIIKL 440
+++G G F V Q+ K C + K Q E IL V+ I+ L
Sbjct: 191 RVLGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKVHSRFIVSL 250
Query: 441 LDEYDTNNELYLVIELIKGGDL----FDAISKNVKFSEEDSKFMTQSLASALSYLHDNYI 496
++T +L LV+ ++ GGD+ ++ N F E + F T + S L +LH I
Sbjct: 251 AYAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVSGLEHLHQRNI 310
Query: 497 VHRDIKPENLLVEMSGCHVKVLKVGDFGLAQRVLRPMFTV---CGTPTYVAPEILNESGY 553
++RD+KPEN+L++ G +++ D GLA + GTP ++APE+L Y
Sbjct: 311 IYRDLKPENVLLDDDGN----VRISDLGLAVELKAGQTKTKGYAGTPGFMAPELLLGEEY 366
Query: 554 GVKIDVWAAGVILYILLCGFPPFVS--DTNDQDELFDDILSGQYGFPSPYWDDISEEAKE 611
+D +A GV LY ++ PF + + + EL +L +P D S +K+
Sbjct: 367 DFSVDYFALGVTLYEMIAARGPFRARGEKVENKELKQRVLEQAVTYP----DKFSPASKD 422
Query: 612 LISHMLESNPDLRFSAED 629
+L+ +P+ R D
Sbjct: 423 FCEALLQKDPEKRLGFRD 440
>pdb|3E92|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
pdb|3E93|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
Length = 371
Score = 90.5 bits (223), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 67/210 (31%), Positives = 104/210 (49%), Gaps = 19/210 (9%)
Query: 377 QRYSVGQIIGDGNFAVVRQVYDKHKDMDCALKIIDK--SKLLGKKQMIENEVNILRSVNH 434
+RY +G G + V +D + A+K + + ++ K+ E+ +L+ + H
Sbjct: 33 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKH 91
Query: 435 PNIIKLLDEY------DTNNELYLVIELIKGGDLFDAISKNVKFSEEDSKFMTQSLASAL 488
N+I LLD + + N++YLV L+ G DL + I K K +++ +F+ + L
Sbjct: 92 ENVIGLLDVFTPARSLEEFNDVYLVTHLM-GADL-NNIVKCQKLTDDHVQFLIYQILRGL 149
Query: 489 SYLHDNYIVHRDIKPENLLVEMSGCHVKVLKVGDFGLAQRVLRPMFTVCGTPTYVAPEI- 547
Y+H I+HRD+KP NL V LK+ DFGLA+ M T Y APEI
Sbjct: 150 KYIHSADIIHRDLKPSNLAVNED----XELKILDFGLARHTDDEMTGYVATRWYRAPEIM 205
Query: 548 LNESGYGVKIDVWAAGVILYILLCG---FP 574
LN Y +D+W+ G I+ LL G FP
Sbjct: 206 LNWMHYNQTVDIWSVGCIMAELLTGRTLFP 235
>pdb|1GOL|A Chain A, Coordinates Of Rat Map Kinase Erk2 With An Arginine
Mutation At Position 52
Length = 364
Score = 90.5 bits (223), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 85/299 (28%), Positives = 133/299 (44%), Gaps = 45/299 (15%)
Query: 378 RYSVGQIIGDGNFAVVRQVYDKHKDMDCALKIIDKSKLLGKKQMIENEVNILRSVNHPNI 437
RY+ IG+G + +V YD + A++ I + Q E+ IL H NI
Sbjct: 28 RYTNLSYIGEGAYGMVCSAYDNLNKVRVAIRKISPFEHQTYCQRTLREIKILLRFRHENI 87
Query: 438 IKLLD-----EYDTNNELYLVIELIKGGDLFDAISKNVKFSEEDSKFMTQSLASALSYLH 492
I + D + ++Y+V +L++ DL+ + K S + + + L Y+H
Sbjct: 88 IGINDIIRAPTIEQMKDVYIVQDLMET-DLYKLL-KTQHLSNDHICYFLYQILRGLKYIH 145
Query: 493 DNYIVHRDIKPENLLVEMSGCHVKVLKVGDFGLAQRVLRP-------MFTVCGTPTYVAP 545
++HRD+KP NLL+ + C LK+ DFGLA RV P + T Y AP
Sbjct: 146 SANVLHRDLKPSNLLLNTT-CD---LKICDFGLA-RVADPDHDHTGFLTEYVATRWYRAP 200
Query: 546 EI-LNESGYGVKIDVWAAGVILYILLCGFPPF--------------VSDTNDQDEL--FD 588
EI LN GY ID+W+ G IL +L P F + + Q++L
Sbjct: 201 EIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCII 260
Query: 589 DILSGQYGFPSPY-----WDDI----SEEAKELISHMLESNPDLRFSAEDVLDHPWLER 638
++ + Y P+ W+ + +A +L+ ML NP R E L HP+LE+
Sbjct: 261 NLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHPYLEQ 319
>pdb|3II5|A Chain A, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
pdb|3II5|B Chain B, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
Length = 306
Score = 90.5 bits (223), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 75/257 (29%), Positives = 129/257 (50%), Gaps = 28/257 (10%)
Query: 357 RCATATIKRRE---NLNIPSKLLQRYSVGQIIGDGNFAVVRQVYDKHKDMDCALKIIDKS 413
R T+ RR+ + IP + +VGQ IG G+F V Y D A+K+++ +
Sbjct: 15 RNRMKTLGRRDSSDDWEIPDGQI---TVGQRIGSGSFGTV---YKGKWHGDVAVKMLNVT 68
Query: 414 KLLGKK-QMIENEVNILRSVNHPNIIKLLDEYDTNNELYLVIELIKGGDLFDAISK-NVK 471
++ Q +NEV +LR H NI+ L Y T +L +V + +G L+ + K
Sbjct: 69 APTPQQLQAFKNEVGVLRKTRHVNIL-LFMGYSTKPQLAIVTQWCEGSSLYHHLHIIETK 127
Query: 472 FSEEDSKFMTQSLASALSYLHDNYIVHRDIKPENLLVEMSGCHVKVLKVGDFGLAQRVLR 531
F + + A + YLH I+HRD+K N+ + +K+GDFGLA R
Sbjct: 128 FEMIKLIDIARQTAQGMDYLHAKSIIHRDLKSNNIFLHED----LTVKIGDFGLATVKSR 183
Query: 532 -----PMFTVCGTPTYVAPEIL---NESGYGVKIDVWAAGVILYILLCGFPPFVSDTNDQ 583
+ G+ ++APE++ +++ Y + DV+A G++LY L+ G P+ S+ N++
Sbjct: 184 WSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPY-SNINNR 242
Query: 584 DELFDDILSGQYGFPSP 600
D++ + G+ G+ SP
Sbjct: 243 DQII--FMVGR-GYLSP 256
>pdb|3D4Q|A Chain A, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3D4Q|B Chain B, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3PSB|A Chain A, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PSB|B Chain B, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PPJ|A Chain A, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPJ|B Chain B, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPK|A Chain A, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PPK|B Chain B, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PRF|A Chain A, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRF|B Chain B, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRI|A Chain A, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3PRI|B Chain B, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3Q4C|A Chain A, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3Q4C|B Chain B, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3PSD|A Chain A, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3PSD|B Chain B, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3SKC|A Chain A, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3SKC|B Chain B, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3TV4|A Chain A, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV4|B Chain B, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV6|A Chain A, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|3TV6|B Chain B, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|4E26|A Chain A, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E26|B Chain B, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E4X|A Chain A, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4E4X|B Chain B, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4G9C|A Chain A, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
pdb|4G9C|B Chain B, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
Length = 307
Score = 90.5 bits (223), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 75/257 (29%), Positives = 129/257 (50%), Gaps = 28/257 (10%)
Query: 357 RCATATIKRRE---NLNIPSKLLQRYSVGQIIGDGNFAVVRQVYDKHKDMDCALKIIDKS 413
R T+ RR+ + IP + +VGQ IG G+F V Y D A+K+++ +
Sbjct: 16 RNRMKTLGRRDSSDDWEIPDGQI---TVGQRIGSGSFGTV---YKGKWHGDVAVKMLNVT 69
Query: 414 KLLGKK-QMIENEVNILRSVNHPNIIKLLDEYDTNNELYLVIELIKGGDLFDAISK-NVK 471
++ Q +NEV +LR H NI+ L Y T +L +V + +G L+ + K
Sbjct: 70 APTPQQLQAFKNEVGVLRKTRHVNIL-LFMGYSTKPQLAIVTQWCEGSSLYHHLHIIETK 128
Query: 472 FSEEDSKFMTQSLASALSYLHDNYIVHRDIKPENLLVEMSGCHVKVLKVGDFGLAQRVLR 531
F + + A + YLH I+HRD+K N+ + +K+GDFGLA R
Sbjct: 129 FEMIKLIDIARQTAQGMDYLHAKSIIHRDLKSNNIFLHED----LTVKIGDFGLATVKSR 184
Query: 532 -----PMFTVCGTPTYVAPEIL---NESGYGVKIDVWAAGVILYILLCGFPPFVSDTNDQ 583
+ G+ ++APE++ +++ Y + DV+A G++LY L+ G P+ S+ N++
Sbjct: 185 WSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPY-SNINNR 243
Query: 584 DELFDDILSGQYGFPSP 600
D++ + G+ G+ SP
Sbjct: 244 DQII--FMVGR-GYLSP 257
>pdb|3MH0|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8T|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg-Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 90.5 bits (223), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 67/210 (31%), Positives = 105/210 (50%), Gaps = 19/210 (9%)
Query: 377 QRYSVGQIIGDGNFAVVRQVYDKHKDMDCALKIIDK--SKLLGKKQMIENEVNILRSVNH 434
+RY +G G + V +D + A+K + + ++ K+ E+ +L+ + H
Sbjct: 22 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKH 80
Query: 435 PNIIKLLDEY------DTNNELYLVIELIKGGDLFDAISKNVKFSEEDSKFMTQSLASAL 488
N+I LLD + + N++YLV L+ G DL + I K K +++ +F+ + L
Sbjct: 81 ENVIGLLDVFTPARSLEEFNDVYLVTHLM-GADL-NNIVKCQKLTDDHVQFLIYQILRGL 138
Query: 489 SYLHDNYIVHRDIKPENLLVEMSGCHVKVLKVGDFGLAQRVLRPMFTVCGTPTYVAPEI- 547
Y+H I+HRD+KP NL V C +K+L D GLA+ M T Y APEI
Sbjct: 139 KYIHSADIIHRDLKPSNLAVN-EDCELKIL---DAGLARHTDDEMTGYVATRWYRAPEIM 194
Query: 548 LNESGYGVKIDVWAAGVILYILLCG---FP 574
LN Y +D+W+ G I+ LL G FP
Sbjct: 195 LNWMHYNQTVDIWSVGCIMAELLTGRTLFP 224
>pdb|2GPH|A Chain A, Docking Motif Interactions In The Map Kinase Erk2
Length = 364
Score = 90.5 bits (223), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 86/299 (28%), Positives = 133/299 (44%), Gaps = 45/299 (15%)
Query: 378 RYSVGQIIGDGNFAVVRQVYDKHKDMDCALKIIDKSKLLGKKQMIENEVNILRSVNHPNI 437
RY+ IG+G + +V YD + A+K I + Q E+ IL H NI
Sbjct: 28 RYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENI 87
Query: 438 IKLLD-----EYDTNNELYLVIELIKGGDLFDAISKNVKFSEEDSKFMTQSLASALSYLH 492
I + D + ++Y+V +L++ DL+ + K S + + + L Y+H
Sbjct: 88 IGINDIIRAPTIEQMKDVYIVQDLMET-DLYKLL-KCQHLSNDHICYFLYQILRGLKYIH 145
Query: 493 DNYIVHRDIKPENLLVEMSGCHVKVLKVGDFGLAQRVLRP-------MFTVCGTPTYVAP 545
++HRD+KP NLL+ + C LK+ DFGLA RV P + T Y AP
Sbjct: 146 SANVLHRDLKPSNLLLNTT-CD---LKICDFGLA-RVADPDHDHTGFLTEYVATRWYRAP 200
Query: 546 EI-LNESGYGVKIDVWAAGVILYILLCGFPPF--------------VSDTNDQDEL--FD 588
EI LN GY ID+W+ G IL +L P F + + Q++L
Sbjct: 201 EIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCII 260
Query: 589 DILSGQYGFPSPY-----WDDI----SEEAKELISHMLESNPDLRFSAEDVLDHPWLER 638
++ + Y P+ W+ + +A +L+ ML NP R E L HP+LE+
Sbjct: 261 NLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHPYLEQ 319
>pdb|3GCP|A Chain A, Human P38 Map Kinase In Complex With Sb203580
pdb|3GCQ|A Chain A, Human P38 Map Kinase In Complex With Rl45
pdb|3GCS|A Chain A, Human P38 Map Kinase In Complex With Sorafenib
pdb|3GCV|A Chain A, Human P38 Map Kinase In Complex With Rl62
pdb|3HV3|A Chain A, Human P38 Map Kinase In Complex With Rl49
pdb|3IW5|A Chain A, Human P38 Map Kinase In Complex With An Indole Derivative
pdb|3IW6|A Chain A, Human P38 Map Kinase In Complex With A Benzylpiperazin-
Pyrrol
pdb|3IW7|A Chain A, Human P38 Map Kinase In Complex With An Imidazo-Pyridine
pdb|3IW8|A Chain A, Structure Of Inactive Human P38 Map Kinase In Complex With
A Thiazole-Urea
pdb|3HUB|A Chain A, Human P38 Map Kinase In Complex With Scios-469
pdb|3L8S|A Chain A, Human P38 Map Kinase In Complex With Cp-547632
pdb|3LFB|A Chain A, Human P38 Map Kinase In Complex With Rl98
pdb|3LFC|A Chain A, Human P38 Map Kinase In Complex With Rl99
pdb|3LFD|A Chain A, Human P38 Map Kinase In Complex With Rl113
pdb|3LFE|A Chain A, Human P38 Map Kinase In Complex With Rl116
pdb|3LFF|A Chain A, Human P38 Map Kinase In Complex With Rl166
pdb|3PG3|A Chain A, Human P38 Map Kinase In Complex With Rl182
Length = 360
Score = 90.5 bits (223), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 66/210 (31%), Positives = 104/210 (49%), Gaps = 19/210 (9%)
Query: 377 QRYSVGQIIGDGNFAVVRQVYDKHKDMDCALKIIDK--SKLLGKKQMIENEVNILRSVNH 434
+RY +G G + V +D + A+K + + ++ K+ E+ +L+ + H
Sbjct: 22 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKH 80
Query: 435 PNIIKLLDEY------DTNNELYLVIELIKGGDLFDAISKNVKFSEEDSKFMTQSLASAL 488
N+I LLD + + N++YLV L+ G DL + I K+ K +++ +F+ + L
Sbjct: 81 ENVIGLLDVFTPARSLEEFNDVYLVTHLM-GADL-NNIVKSQKLTDDHVQFLIYQILRGL 138
Query: 489 SYLHDNYIVHRDIKPENLLVEMSGCHVKVLKVGDFGLAQRVLRPMFTVCGTPTYVAPEI- 547
Y+H I+HRD+KP NL V LK+ DFGL + M T Y APEI
Sbjct: 139 KYIHSADIIHRDLKPSNLAVNEDS----ELKILDFGLCRHTDDEMTGYVATRWYRAPEIM 194
Query: 548 LNESGYGVKIDVWAAGVILYILLCG---FP 574
LN Y +D+W+ G I+ LL G FP
Sbjct: 195 LNWMHYNQTVDIWSVGCIMAELLTGRTLFP 224
>pdb|3P23|A Chain A, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|B Chain B, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|C Chain C, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|D Chain D, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
Length = 432
Score = 90.5 bits (223), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 71/226 (31%), Positives = 107/226 (47%), Gaps = 15/226 (6%)
Query: 423 ENEVNILR-SVNHPNIIKLLDEYDTNNELYLVIELIKGGDLFDAISKNVKFSEEDSKFMT 481
+ EV +LR S HPN+I+ Y+ IEL K+ + +
Sbjct: 65 DREVQLLRESDEHPNVIRYFCTEKDRQFQYIAIELCAATLQEYVEQKDFAHLGLEPITLL 124
Query: 482 QSLASALSYLHDNYIVHRDIKPENLLVEMSGCHVKV-LKVGDFGLAQR--VLRPMFT--- 535
Q S L++LH IVHRD+KP N+L+ M H K+ + DFGL ++ V R F+
Sbjct: 125 QQTTSGLAHLHSLNIVHRDLKPHNILISMPNAHGKIKAMISDFGLCKKLAVGRHSFSRRS 184
Query: 536 -VCGTPTYVAPEILNE---SGYGVKIDVWAAGVILYILLC-GFPPFVSDTNDQDELFDDI 590
V GT ++APE+L+E +D+++AG + Y ++ G PF Q +
Sbjct: 185 GVPGTEGWIAPEMLSEDCKENPTYTVDIFSAGCVFYYVISEGSHPFGKSLQRQANILLGA 244
Query: 591 LSGQYGFPSPYWDDISEEAKELISHMLESNPDLRFSAEDVLDHPWL 636
S P + D I A+ELI M+ +P R SA+ VL HP+
Sbjct: 245 CSLDCLHPEKHEDVI---ARELIEKMIAMDPQKRPSAKHVLKHPFF 287
>pdb|2W96|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 90.1 bits (222), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 88/298 (29%), Positives = 127/298 (42%), Gaps = 45/298 (15%)
Query: 378 RYSVGQIIGDGNFAVVRQVYDKHKDMDCALKIID-KSKLLGKKQMIENEVNILR---SVN 433
RY IG G + V + D H ALK + + G EV +LR +
Sbjct: 5 RYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGEEGLPISTVREVALLRRLEAFE 64
Query: 434 HPNIIKLLD-----EYDTNNELYLVIELIKGGDLFDAISKNVK--FSEEDSKFMTQSLAS 486
HPN+++L+D D ++ LV E + DL + K E K + +
Sbjct: 65 HPNVVRLMDVCATSRTDREIKVTLVFEHVDQ-DLRTYLDKAPPPGLPAETIKDLMRQFLR 123
Query: 487 ALSYLHDNYIVHRDIKPENLLVEMSGCHVKVLKVGDFGLA-----QRVLRPMFTVCGTPT 541
L +LH N IVHRD+KPEN+LV G +K+ DFGLA Q L P V T
Sbjct: 124 GLDFLHANCIVHRDLKPENILVTSGG----TVKLADFGLARIYSYQMALDP---VVVTLW 176
Query: 542 YVAPEILNESGYGVKIDVWAAGVILYILLCGFPPFV--SDTNDQDELFD----------- 588
Y APE+L +S Y +D+W+ G I + P F S+ + ++FD
Sbjct: 177 YRAPEVLLQSTYATPVDMWSVGCIFAEMFRRKPLFCGNSEADQLGKIFDLIGLPPEDDWP 236
Query: 589 -DILSGQYGFP-------SPYWDDISEEAKELISHMLESNPDLRFSAEDVLDHPWLER 638
D+ + FP ++ E +L+ ML NP R SA L H +L +
Sbjct: 237 RDVSLPRGAFPPRGPRPVQSVVPEMEESGAQLLLEMLTFNPHKRISAFRALQHSYLHK 294
>pdb|1CM8|A Chain A, Phosphorylated Map Kinase P38-Gamma
pdb|1CM8|B Chain B, Phosphorylated Map Kinase P38-Gamma
Length = 367
Score = 90.1 bits (222), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 89/314 (28%), Positives = 137/314 (43%), Gaps = 43/314 (13%)
Query: 359 ATATIKRRENLNIPSKLLQRYSVGQIIGDGNFAVVRQVYDKHKDMDCALKIIDK---SKL 415
A + R+E ++ Y Q +G G + V D A+K + + S+L
Sbjct: 7 ARSGFYRQEVTKTAWEVRAVYRDLQPVGSGAYGAVCSAVDGRTGAKVAIKKLYRPFQSEL 66
Query: 416 LGKKQMIENEVNILRSVNHPNIIKLLDEY------DTNNELYLVIELIKGGDLFDAISKN 469
K+ E+ +L+ + H N+I LLD + D + YLV+ + G DL + K+
Sbjct: 67 FAKRAY--RELRLLKHMRHENVIGLLDVFTPDETLDDFTDFYLVMPFM-GTDL-GKLMKH 122
Query: 470 VKFSEEDSKFMTQSLASALSYLHDNYIVHRDIKPENLLVEMSGCHVKVLKVGDFGLAQRV 529
K E+ +F+ + L Y+H I+HRD+KP NL V C +K+L DFGLA++
Sbjct: 123 EKLGEDRIQFLVYQMLKGLRYIHAAGIIHRDLKPGNLAVN-EDCELKIL---DFGLARQA 178
Query: 530 LRPMFTVCGTPTYVAPE-ILNESGYGVKIDVWAAGVILYILLCGFPPFV-SDTNDQ-DEL 586
M T Y APE ILN Y +D+W+ G I+ ++ G F SD DQ E+
Sbjct: 179 DSEMXGXVVTRWYRAPEVILNWMRYTQTVDIWSVGCIMAEMITGKTLFKGSDHLDQLKEI 238
Query: 587 F----------------DDILSGQYGFPSPYWDDI-------SEEAKELISHMLESNPDL 623
D+ + G P D S A L+ ML + +
Sbjct: 239 MKVTGTPPAEFVQRLQSDEAKNYMKGLPELEKKDFASILTNASPLAVNLLEKMLVLDAEQ 298
Query: 624 RFSAEDVLDHPWLE 637
R +A + L HP+ E
Sbjct: 299 RVTAGEALAHPYFE 312
>pdb|4E7W|A Chain A, Structure Of Gsk3 From Ustilago Maydis
Length = 394
Score = 90.1 bits (222), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 84/295 (28%), Positives = 136/295 (46%), Gaps = 46/295 (15%)
Query: 379 YSVGQIIGDGNFAVVRQVYDKHKDMDCALKIIDKSKLLGKKQMIENEVNILRSVNHPNII 438
Y+ ++IG+G+F VV Q D + A+K K+L K+ E+ I+R V HPN++
Sbjct: 42 YTNCKVIGNGSFGVVFQAKLVESD-EVAIK-----KVLQDKRFKNRELQIMRIVKHPNVV 95
Query: 439 KLLDEYDTNNE------LYLVIELIKGGDLFDAISKNVKFSEEDS----KFMTQSLASAL 488
L + +N + L LV+E + ++ A K + K L +L
Sbjct: 96 DLKAFFYSNGDKKDEVFLNLVLEYVPE-TVYRASRHYAKLKQTMPMLLIKLYMYQLLRSL 154
Query: 489 SYLHDNYIVHRDIKPENLLVEMSGCHVKVLKVGDFGLAQRVL--RPMFTVCGTPTYVAPE 546
+Y+H I HRDIKP+NLL++ VLK+ DFG A+ ++ P + + Y APE
Sbjct: 155 AYIHSIGICHRDIKPQNLLLDPPS---GVLKLIDFGSAKILIAGEPNVSXICSRYYRAPE 211
Query: 547 -ILNESGYGVKIDVWAAGVILYILLCGFPPFVSDTN-DQDELFDDILSG----------- 593
I + Y ID+W+ G ++ L+ G P F ++ DQ +L
Sbjct: 212 LIFGATNYTTNIDIWSTGCVMAELMQGQPLFPGESGIDQLVEIIKVLGTPSREQIKTMNP 271
Query: 594 ---QYGFPSPYWDDISE--------EAKELISHMLESNPDLRFSAEDVLDHPWLE 637
++ FP S+ +A +LIS +LE P R +A + L HP+ +
Sbjct: 272 NYMEHKFPQIRPHPFSKVFRPRTPPDAIDLISRLLEYTPSARLTAIEALCHPFFD 326
>pdb|3MH3|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBJ|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
Length = 360
Score = 90.1 bits (222), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 67/210 (31%), Positives = 105/210 (50%), Gaps = 19/210 (9%)
Query: 377 QRYSVGQIIGDGNFAVVRQVYDKHKDMDCALKIIDK--SKLLGKKQMIENEVNILRSVNH 434
+RY +G G + V +D + A+K + + ++ K+ E+ +L+ + H
Sbjct: 22 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKH 80
Query: 435 PNIIKLLDEY------DTNNELYLVIELIKGGDLFDAISKNVKFSEEDSKFMTQSLASAL 488
N+I LLD + + N++YLV L+ G DL + I K K +++ +F+ + L
Sbjct: 81 ENVIGLLDVFTPARSLEEFNDVYLVTHLM-GADL-NNIVKCQKLTDDHVQFLIYQILRGL 138
Query: 489 SYLHDNYIVHRDIKPENLLVEMSGCHVKVLKVGDFGLAQRVLRPMFTVCGTPTYVAPEI- 547
Y+H I+HRD+KP NL V C +K+L D GLA+ M T Y APEI
Sbjct: 139 KYIHSADIIHRDLKPSNLAVN-EDCELKIL---DRGLARHTDDEMTGYVATRWYRAPEIM 194
Query: 548 LNESGYGVKIDVWAAGVILYILLCG---FP 574
LN Y +D+W+ G I+ LL G FP
Sbjct: 195 LNWMHYNQTVDIWSVGCIMAELLTGRTLFP 224
>pdb|4EXU|A Chain A, Mapk13, Inactive Form
pdb|4EYJ|A Chain A, Mapk13 Complex With Inhibitor
pdb|4EYM|A Chain A, Mapk13 Complex With Inhibitor
Length = 371
Score = 90.1 bits (222), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 82/288 (28%), Positives = 130/288 (45%), Gaps = 44/288 (15%)
Query: 385 IGDGNFAVVRQVYDKHKDMDCALKIIDK---SKLLGKKQMIENEVNILRSVNHPNIIKLL 441
+G G + V DK A+K + + S++ K+ E+ +L+ + H N+I LL
Sbjct: 50 VGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEIFAKRAY--RELLLLKHMQHENVIGLL 107
Query: 442 DEYDTNNEL------YLVIELIKGGDLFDAISKNVKFSEEDSKFMTQSLASALSYLHDNY 495
D + + L YLV+ ++ DL + ++FSEE +++ + L Y+H
Sbjct: 108 DVFTPASSLRNFYDFYLVMPFMQT-DLQKIM--GMEFSEEKIQYLVYQMLKGLKYIHSAG 164
Query: 496 IVHRDIKPENLLVEMSGCHVKVLKVGDFGLAQRVLRPMFTVCGTPTYVAPE-ILNESGYG 554
+VHRD+KP NL V C +K+L DFGLA+ M T Y APE IL+ Y
Sbjct: 165 VVHRDLKPGNLAVN-EDCELKIL---DFGLARHADAEMTGYVVTRWYRAPEVILSWMHYN 220
Query: 555 VKIDVWAAGVILYILLCGFPPFVS-DTNDQ---------------DELFDDILSGQY--G 596
+D+W+ G I+ +L G F D DQ + +D + Y
Sbjct: 221 QTVDIWSVGCIMAEMLTGKTLFKGKDYLDQLTQILKVTGVPGTEFVQKLNDKAAKSYIQS 280
Query: 597 FPSPYWDDISE-------EAKELISHMLESNPDLRFSAEDVLDHPWLE 637
P D ++ +A +L+ MLE + D R +A L HP+ E
Sbjct: 281 LPQTPRKDFTQLFPRASPQAADLLEKMLELDVDKRLTAAQALTHPFFE 328
>pdb|3Q96|A Chain A, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
pdb|3Q96|B Chain B, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
Length = 282
Score = 90.1 bits (222), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 69/231 (29%), Positives = 119/231 (51%), Gaps = 22/231 (9%)
Query: 380 SVGQIIGDGNFAVVRQVYDKHKDMDCALKIIDKSKLLGKK-QMIENEVNILRSVNHPNII 438
+VGQ IG G+F V Y D A+K+++ + ++ Q +NEV +LR H NI+
Sbjct: 13 TVGQRIGSGSFGTV---YKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNIL 69
Query: 439 KLLDEYDTNNELYLVIELIKGGDLFDAISK-NVKFSEEDSKFMTQSLASALSYLHDNYIV 497
L Y T +L +V + +G L+ + KF + + A + YLH I+
Sbjct: 70 -LFMGYSTKPQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHAKSII 128
Query: 498 HRDIKPENLLVEMSGCHVKVLKVGDFGLAQRVLR-----PMFTVCGTPTYVAPEIL---N 549
HRD+K N+ + +K+GDFGLA R + G+ ++APE++ +
Sbjct: 129 HRDLKSNNIFLHED----LTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQD 184
Query: 550 ESGYGVKIDVWAAGVILYILLCGFPPFVSDTNDQDELFDDILSGQYGFPSP 600
++ Y + DV+A G++LY L+ G P+ S+ N++D++ + G+ G+ SP
Sbjct: 185 KNPYSFQSDVYAFGIVLYELMTGQLPY-SNINNRDQII--FMVGR-GYLSP 231
>pdb|3MH1|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBG|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
pdb|3OC1|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 90.1 bits (222), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 69/224 (30%), Positives = 110/224 (49%), Gaps = 17/224 (7%)
Query: 362 TIKRRENLNIPSKLLQRYSVGQIIGDGNFAVVRQVYDKHKDMDCALKIIDKS-KLLGKKQ 420
T R+E ++ +RY +G G + V +D + A+K + + + + +
Sbjct: 7 TFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAK 66
Query: 421 MIENEVNILRSVNHPNIIKLLDEY------DTNNELYLVIELIKGGDLFDAISKNVKFSE 474
E+ +L+ + H N+I LLD + + N++YLV L+ G DL + I K K ++
Sbjct: 67 RTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLM-GADL-NNIVKCQKLTD 124
Query: 475 EDSKFMTQSLASALSYLHDNYIVHRDIKPENLLVEMSGCHVKVLKVGDFGLAQRVLRPMF 534
+ +F+ + L Y+H I+HRD+KP NL V C +K+L D GLA+ M
Sbjct: 125 DHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVN-EDCELKIL---DGGLARHTDDEMT 180
Query: 535 TVCGTPTYVAPEI-LNESGYGVKIDVWAAGVILYILLCG---FP 574
T Y APEI LN Y +D+W+ G I+ LL G FP
Sbjct: 181 GYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFP 224
>pdb|3TEI|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|D Chain D, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 90.1 bits (222), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 85/299 (28%), Positives = 133/299 (44%), Gaps = 45/299 (15%)
Query: 378 RYSVGQIIGDGNFAVVRQVYDKHKDMDCALKIIDKSKLLGKKQMIENEVNILRSVNHPNI 437
RY+ IG+G + +V YD + A+K I + Q E+ IL + H NI
Sbjct: 26 RYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLAFRHENI 85
Query: 438 IKLLD-----EYDTNNELYLVIELIKGGDLFDAISKNVKFSEEDSKFMTQSLASALSYLH 492
I + D + ++Y+V +L++ DL+ + K S + + + L Y+H
Sbjct: 86 IGINDIIRAPTIEQMKDVYIVQDLMET-DLYKLL-KTQHLSNDHICYFLYQILRGLKYIH 143
Query: 493 DNYIVHRDIKPENLLVEMSGCHVKVLKVGDFGLAQRVLRP-------MFTVCGTPTYVAP 545
++HRD+KP NLL+ + C LK+ DFGLA RV P + T Y AP
Sbjct: 144 SANVLHRDLKPSNLLLNTT-CD---LKICDFGLA-RVADPDHDHTGFLTEYVATRWYRAP 198
Query: 546 EI-LNESGYGVKIDVWAAGVILYILLCGFPPF--------------VSDTNDQDEL--FD 588
EI LN GY ID+W+ G IL +L P F + + Q++L
Sbjct: 199 EIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCII 258
Query: 589 DILSGQYGFPSPY-----WDDI----SEEAKELISHMLESNPDLRFSAEDVLDHPWLER 638
++ + Y P+ W+ + +A +L+ ML NP R E L HP+L +
Sbjct: 259 NLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHPYLAQ 317
>pdb|3E7O|A Chain A, Crystal Structure Of Jnk2
pdb|3E7O|B Chain B, Crystal Structure Of Jnk2
Length = 360
Score = 90.1 bits (222), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 84/312 (26%), Positives = 143/312 (45%), Gaps = 62/312 (19%)
Query: 375 LLQRYSVGQIIGDGNFAVVRQVYDKHKDMDCALKIIDK---SKLLGKKQMIENEVNILRS 431
+L+RY + IG G +V +D ++ A+K + + ++ K+ E+ +L+
Sbjct: 20 VLKRYQQLKPIGSGAQGIVCAAFDTVLGINVAVKKLSRPFQNQTHAKRAY--RELVLLKC 77
Query: 432 VNHPNIIKLLDEYDTNNEL------YLVIELIKGGDLFDAISKNVKFSEEDSKFMTQSLA 485
VNH NII LL+ + L YLV+EL+ +L I +++ E ++ +
Sbjct: 78 VNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDA-NLCQVI--HMELDHERMSYLLYQML 134
Query: 486 SALSYLHDNYIVHRDIKPENLLVEMSGCHVKVLKVGDFGLAQRVLR--PMFTVCGTPTYV 543
+ +LH I+HRD+KP N++V+ S C +K+L DFGLA+ M T Y
Sbjct: 135 CGIKHLHSAGIIHRDLKPSNIVVK-SDCTLKIL---DFGLARTASTNFMMTPYVVTRYYR 190
Query: 544 APEILNESGYGVKIDVWAAGVILYILLCGFPPFVSDTNDQDELFDDILSGQYGFPS---- 599
APE++ GY +D+W+ G I+ L+ G + D + ++ ++ Q G PS
Sbjct: 191 APEVILGMGYKENVDIWSVGCIMGELVKG--SVIFQGTDHIDQWNKVIE-QLGTPSAEFM 247
Query: 600 --------------------------PYWDDISE---------EAKELISHMLESNPDLR 624
P W SE +A++L+S ML +PD R
Sbjct: 248 AALQPTVRNYVENRPAYPGIAFEELFPDWIFPSESERDKIKTSQARDLLSKMLVIDPDKR 307
Query: 625 FSAEDVLDHPWL 636
S ++ L HP++
Sbjct: 308 ISVDEALRHPYI 319
>pdb|2FB8|A Chain A, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
pdb|2FB8|B Chain B, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
Length = 281
Score = 89.7 bits (221), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 69/231 (29%), Positives = 119/231 (51%), Gaps = 22/231 (9%)
Query: 380 SVGQIIGDGNFAVVRQVYDKHKDMDCALKIIDKSKLLGKK-QMIENEVNILRSVNHPNII 438
+VGQ IG G+F V Y D A+K+++ + ++ Q +NEV +LR H NI+
Sbjct: 16 TVGQRIGSGSFGTV---YKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNIL 72
Query: 439 KLLDEYDTNNELYLVIELIKGGDLFDAISK-NVKFSEEDSKFMTQSLASALSYLHDNYIV 497
L Y T +L +V + +G L+ + KF + + A + YLH I+
Sbjct: 73 -LFMGYSTKPQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHAKSII 131
Query: 498 HRDIKPENLLVEMSGCHVKVLKVGDFGLAQRVLR-----PMFTVCGTPTYVAPEIL---N 549
HRD+K N+ + +K+GDFGLA R + G+ ++APE++ +
Sbjct: 132 HRDLKSNNIFLHED----LTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQD 187
Query: 550 ESGYGVKIDVWAAGVILYILLCGFPPFVSDTNDQDELFDDILSGQYGFPSP 600
++ Y + DV+A G++LY L+ G P+ S+ N++D++ + G+ G+ SP
Sbjct: 188 KNPYSFQSDVYAFGIVLYELMTGQLPY-SNINNRDQII--FMVGR-GYLSP 234
>pdb|4DBN|A Chain A, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
pdb|4DBN|B Chain B, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 284
Score = 89.7 bits (221), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 69/231 (29%), Positives = 119/231 (51%), Gaps = 22/231 (9%)
Query: 380 SVGQIIGDGNFAVVRQVYDKHKDMDCALKIIDKSKLLGKK-QMIENEVNILRSVNHPNII 438
+VGQ IG G+F V Y D A+K+++ + ++ Q +NEV +LR H NI+
Sbjct: 16 TVGQRIGSGSFGTV---YKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNIL 72
Query: 439 KLLDEYDTNNELYLVIELIKGGDLFDAISK-NVKFSEEDSKFMTQSLASALSYLHDNYIV 497
L Y T +L +V + +G L+ + KF + + A + YLH I+
Sbjct: 73 -LFMGYSTKPQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHAKSII 131
Query: 498 HRDIKPENLLVEMSGCHVKVLKVGDFGLAQRVLR-----PMFTVCGTPTYVAPEIL---N 549
HRD+K N+ + +K+GDFGLA R + G+ ++APE++ +
Sbjct: 132 HRDLKSNNIFLHED----LTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQD 187
Query: 550 ESGYGVKIDVWAAGVILYILLCGFPPFVSDTNDQDELFDDILSGQYGFPSP 600
++ Y + DV+A G++LY L+ G P+ S+ N++D++ + G+ G+ SP
Sbjct: 188 KNPYSFQSDVYAFGIVLYELMTGQLPY-SNINNRDQII--FMVGR-GYLSP 234
>pdb|4H58|A Chain A, Braf In Complex With Compound 3
pdb|4H58|B Chain B, Braf In Complex With Compound 3
pdb|4H58|C Chain C, Braf In Complex With Compound 3
Length = 275
Score = 89.7 bits (221), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 69/231 (29%), Positives = 119/231 (51%), Gaps = 22/231 (9%)
Query: 380 SVGQIIGDGNFAVVRQVYDKHKDMDCALKIIDKSKLLGKK-QMIENEVNILRSVNHPNII 438
+VGQ IG G+F V Y D A+K+++ + ++ Q +NEV +LR H NI+
Sbjct: 11 TVGQRIGSGSFGTV---YKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNIL 67
Query: 439 KLLDEYDTNNELYLVIELIKGGDLFDAISK-NVKFSEEDSKFMTQSLASALSYLHDNYIV 497
L Y T +L +V + +G L+ + KF + + A + YLH I+
Sbjct: 68 -LFMGYSTKPQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHAKSII 126
Query: 498 HRDIKPENLLVEMSGCHVKVLKVGDFGLAQRVLR-----PMFTVCGTPTYVAPEIL---N 549
HRD+K N+ + +K+GDFGLA R + G+ ++APE++ +
Sbjct: 127 HRDLKSNNIFLHED----LTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQD 182
Query: 550 ESGYGVKIDVWAAGVILYILLCGFPPFVSDTNDQDELFDDILSGQYGFPSP 600
++ Y + DV+A G++LY L+ G P+ S+ N++D++ + G+ G+ SP
Sbjct: 183 KNPYSFQSDVYAFGIVLYELMTGQLPY-SNINNRDQII--FMVGR-GYLSP 229
>pdb|1UWH|A Chain A, The Complex Of Wild Type B-Raf And Bay439006
pdb|1UWH|B Chain B, The Complex Of Wild Type B-Raf And Bay439006
Length = 276
Score = 89.4 bits (220), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 69/231 (29%), Positives = 119/231 (51%), Gaps = 22/231 (9%)
Query: 380 SVGQIIGDGNFAVVRQVYDKHKDMDCALKIIDKSKLLGKK-QMIENEVNILRSVNHPNII 438
+VGQ IG G+F V Y D A+K+++ + ++ Q +NEV +LR H NI+
Sbjct: 11 TVGQRIGSGSFGTV---YKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNIL 67
Query: 439 KLLDEYDTNNELYLVIELIKGGDLFDAISK-NVKFSEEDSKFMTQSLASALSYLHDNYIV 497
L Y T +L +V + +G L+ + KF + + A + YLH I+
Sbjct: 68 -LFMGYSTAPQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHAKSII 126
Query: 498 HRDIKPENLLVEMSGCHVKVLKVGDFGLAQRVLR-----PMFTVCGTPTYVAPEIL---N 549
HRD+K N+ + +K+GDFGLA R + G+ ++APE++ +
Sbjct: 127 HRDLKSNNIFLHED----LTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQD 182
Query: 550 ESGYGVKIDVWAAGVILYILLCGFPPFVSDTNDQDELFDDILSGQYGFPSP 600
++ Y + DV+A G++LY L+ G P+ S+ N++D++ + G+ G+ SP
Sbjct: 183 KNPYSFQSDVYAFGIVLYELMTGQLPY-SNINNRDQII--FMVGR-GYLSP 229
>pdb|3GI3|A Chain A, Crystal Structure Of A N-Phenyl-N'-Naphthylurea Analog In
Complex With P38 Map Kinase
Length = 360
Score = 89.0 bits (219), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 69/224 (30%), Positives = 109/224 (48%), Gaps = 17/224 (7%)
Query: 362 TIKRRENLNIPSKLLQRYSVGQIIGDGNFAVVRQVYDKHKDMDCALKIIDKS-KLLGKKQ 420
T R+E ++ +RY +G G + V +D A+K + + + + +
Sbjct: 7 TFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAK 66
Query: 421 MIENEVNILRSVNHPNIIKLLDEY------DTNNELYLVIELIKGGDLFDAISKNVKFSE 474
E+ +L+ + H N+I LLD + + N++YLV L+ G DL + I K K ++
Sbjct: 67 RTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLM-GADL-NNIVKCQKLTD 124
Query: 475 EDSKFMTQSLASALSYLHDNYIVHRDIKPENLLVEMSGCHVKVLKVGDFGLAQRVLRPMF 534
+ +F+ + L Y+H I+HRD+KP NL V C +K+L DF LA+ M
Sbjct: 125 DHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVN-EDCELKIL---DFYLARHTDDEMT 180
Query: 535 TVCGTPTYVAPEI-LNESGYGVKIDVWAAGVILYILLCG---FP 574
T Y APEI LN Y +D+W+ G I+ LL G FP
Sbjct: 181 GYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFP 224
>pdb|3NR9|A Chain A, Structure Of Human Cdc2-Like Kinase 2 (Clk2)
pdb|3NR9|B Chain B, Structure Of Human Cdc2-Like Kinase 2 (Clk2)
pdb|3NR9|C Chain C, Structure Of Human Cdc2-Like Kinase 2 (Clk2)
Length = 368
Score = 89.0 bits (219), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 83/331 (25%), Positives = 135/331 (40%), Gaps = 65/331 (19%)
Query: 370 NIPSKLLQRYSVGQIIGDGNFAVVRQVYDKHKD-MDCALKIIDKSKLLGKKQMIENEVNI 428
++ L +RY + +G+G F V Q D + ALKII + K+ E+N+
Sbjct: 26 HVGDWLQERYEIVSTLGEGTFGRVVQCVDHRRGGARVALKIIKNVE--KYKEAARLEINV 83
Query: 429 LRSVNHPN------IIKLLDEYDTNNELYLVIELIKGGDLFDAISKN--VKFSEEDSKFM 480
L +N + +++ D +D + + + EL+ G FD + N + + + M
Sbjct: 84 LEKINEKDPDNKNLCVQMFDWFDYHGHMCISFELL-GLSTFDFLKDNNYLPYPIHQVRHM 142
Query: 481 TQSLASALSYLHDNYIVHRDIKPENLLVEMSGCHV---------------KVLKVGDFGL 525
L A+ +LHDN + H D+KPEN+L S + ++V DFG
Sbjct: 143 AFQLCQAVKFLHDNKLTHTDLKPENILFVNSDYELTYNLEKKRDERSVKSTAVRVVDFGS 202
Query: 526 AQRVLRPMFTVCGTPTYVAPEILNESGYGVKIDVWAAGVILYILLCGFPPF-VSDTNDQD 584
A T+ T Y APE++ E G+ DVW+ G I++ GF F D +
Sbjct: 203 ATFDHEHHSTIVSTRHYRAPEVILELGWSQPCDVWSIGCIIFEYYVGFTLFQTHDNREHL 262
Query: 585 ELFDDILS------------GQYGFPSPY-WDD------------------ISEEAKE-- 611
+ + IL +Y + WD+ ++ EA+E
Sbjct: 263 AMMERILGPIPSRMIRKTRKQKYFYRGRLDWDENTSAGRYVRENCKPLRRYLTSEAEEHH 322
Query: 612 ----LISHMLESNPDLRFSAEDVLDHPWLER 638
LI MLE P R + + L HP+ R
Sbjct: 323 QLFDLIESMLEYEPAKRLTLGEALQHPFFAR 353
>pdb|4H3Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 88.6 bits (218), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 84/299 (28%), Positives = 132/299 (44%), Gaps = 45/299 (15%)
Query: 378 RYSVGQIIGDGNFAVVRQVYDKHKDMDCALKIIDKSKLLGKKQMIENEVNILRSVNHPNI 437
RY+ IG+G + +V YD + A+K I + Q E+ IL + H NI
Sbjct: 26 RYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLAFRHENI 85
Query: 438 IKLLD-----EYDTNNELYLVIELIKGGDLFDAISKNVKFSEEDSKFMTQSLASALSYLH 492
I + D + ++Y+V +L++ DL+ + K S + + + L Y+H
Sbjct: 86 IGINDIIRAPTIEQMKDVYIVQDLMET-DLYKLL-KTQHLSNDHICYFLYQILRGLKYIH 143
Query: 493 DNYIVHRDIKPENLLVEMSGCHVKVLKVGDFGLAQRVLRP-------MFTVCGTPTYVAP 545
++HRD+KP NLL+ + LK+ DFGLA RV P + T Y AP
Sbjct: 144 SANVLHRDLKPSNLLLNTTS----DLKICDFGLA-RVADPDHDHTGFLTEYVATRWYRAP 198
Query: 546 EI-LNESGYGVKIDVWAAGVILYILLCGFPPF--------------VSDTNDQDEL--FD 588
EI LN GY ID+W+ G IL +L P F + + Q++L
Sbjct: 199 EIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCGI 258
Query: 589 DILSGQYGFPSPY-----WDDI----SEEAKELISHMLESNPDLRFSAEDVLDHPWLER 638
++ + Y P+ W+ + +A +L+ ML NP R E L HP+L +
Sbjct: 259 NLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHPYLAQ 317
>pdb|4AN2|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN3|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN9|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4ANB|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs
Length = 301
Score = 88.6 bits (218), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 71/262 (27%), Positives = 127/262 (48%), Gaps = 20/262 (7%)
Query: 385 IGDGNFAVVRQVYDKHKDMDCALKIIDKSKLLGKKQMIENEVNILRSVNHPNIIKLLDEY 444
+G GN VV +V K + A K+I + I E+ +L N P I+ +
Sbjct: 17 LGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAF 76
Query: 445 DTNNELYLVIELIKGGDLFDAISKNVKFSEEDSKFMTQSLASALSYLHDNY-IVHRDIKP 503
++ E+ + +E + GG L + K + E+ ++ ++ L+YL + + I+HRD+KP
Sbjct: 77 YSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYLREKHKIMHRDVKP 136
Query: 504 ENLLVEMSGCHVKVLKVGDFGLAQRVLRPMFT-VCGTPTYVAPEILNESGYGVKIDVWAA 562
N+LV G +K+ DFG++ +++ M GT +Y++PE L + Y V+ D+W+
Sbjct: 137 SNILVNSRG----EIKLCDFGVSGQLIDEMANEFVGTRSYMSPERLQGTHYSVQSDIWSM 192
Query: 563 GVILYILLCG---FPPFVSDTNDQDELFDDILSGQYGFPSPYWDD--ISEEAKELISHML 617
G+ L + G PP EL D I++ P P S E ++ ++ L
Sbjct: 193 GLSLVEMAVGRYPRPPMAI-----FELLDYIVNE----PPPKLPSAVFSLEFQDFVNKCL 243
Query: 618 ESNPDLRFSAEDVLDHPWLERS 639
NP R + ++ H +++RS
Sbjct: 244 IKNPAERADLKQLMVHAFIKRS 265
>pdb|3TTJ|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-359, A Jnk
Inhibitor For The Prevention Of Ischemia-Reperfusion
Injury
pdb|3TTI|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-930, An Orally
Active Anti-Fibrotic Jnk Inhibitor
Length = 464
Score = 87.8 bits (216), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 83/309 (26%), Positives = 138/309 (44%), Gaps = 56/309 (18%)
Query: 375 LLQRYSVGQIIGDGNFAVVRQVYDKHKDMDCALKIIDK---SKLLGKKQMIENEVNILRS 431
+L+RY + IG G +V YD D + A+K + + ++ K+ E+ +++
Sbjct: 60 VLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAY--RELVLMKC 117
Query: 432 VNHPNIIKLLDEYDTNNEL------YLVIELIKGGDLFDAISKNVKFSEEDSKFMTQSLA 485
VNH NII LL+ + L YLV+EL+ +L I ++ E ++ +
Sbjct: 118 VNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDA-NLCQVI--QMELDHERMSYLLYQML 174
Query: 486 SALSYLHDNYIVHRDIKPENLLVEMSGCHVKVLKVGDFGLAQRVLRP--MFTVCGTPTYV 543
+ +LH I+HRD+KP N++V+ S C +K+L DFGLA+ M T Y
Sbjct: 175 CGIKHLHSAGIIHRDLKPSNIVVK-SDCTLKIL---DFGLARTAGTSFMMTPYVVTRYYR 230
Query: 544 APEILNESGYGVKIDVWAAGVIL------YILLCG-----------------FPPFVSDT 580
APE++ GY +D+W+ G I+ IL G P F+
Sbjct: 231 APEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKL 290
Query: 581 NDQDELFDDILSGQYG--FPSPYWDDI-----------SEEAKELISHMLESNPDLRFSA 627
+ + G FP + D + + +A++L+S ML +P R S
Sbjct: 291 QPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISV 350
Query: 628 EDVLDHPWL 636
+D L HP++
Sbjct: 351 DDALQHPYI 359
>pdb|1JNK|A Chain A, The C-Jun N-Terminal Kinase (Jnk3s) Complexed With
Mgamp-Pnp
Length = 423
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 83/309 (26%), Positives = 138/309 (44%), Gaps = 56/309 (18%)
Query: 375 LLQRYSVGQIIGDGNFAVVRQVYDKHKDMDCALKIIDK---SKLLGKKQMIENEVNILRS 431
+L+RY + IG G +V YD D + A+K + + ++ K+ E+ +++
Sbjct: 60 VLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAY--RELVLMKC 117
Query: 432 VNHPNIIKLLDEYDTNNEL------YLVIELIKGGDLFDAISKNVKFSEEDSKFMTQSLA 485
VNH NII LL+ + L YLV+EL+ +L I ++ E ++ +
Sbjct: 118 VNHKNIISLLNVFTPQKTLEEFQDVYLVMELM-DANLCQVI--QMELDHERMSYLLYQML 174
Query: 486 SALSYLHDNYIVHRDIKPENLLVEMSGCHVKVLKVGDFGLAQRVLRP--MFTVCGTPTYV 543
+ +LH I+HRD+KP N++V+ S C +K+L DFGLA+ M T Y
Sbjct: 175 CGIKHLHSAGIIHRDLKPSNIVVK-SDCTLKIL---DFGLARTAGTSFMMTPYVVTRYYR 230
Query: 544 APEILNESGYGVKIDVWAAGVIL------YILLCG-----------------FPPFVSDT 580
APE++ GY +D+W+ G I+ IL G P F+
Sbjct: 231 APEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKL 290
Query: 581 NDQDELFDDILSGQYG--FPSPYWDDI-----------SEEAKELISHMLESNPDLRFSA 627
+ + G FP + D + + +A++L+S ML +P R S
Sbjct: 291 QPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISV 350
Query: 628 EDVLDHPWL 636
+D L HP++
Sbjct: 351 DDALQHPYI 359
>pdb|1PMN|A Chain A, Crystal Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMQ|A Chain A, The Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMU|A Chain A, The Crystal Structure Of Jnk3 In Complex With A
Phenantroline Inhibitor
pdb|1PMV|A Chain A, The Structure Of Jnk3 In Complex With A
Dihydroanthrapyrazole Inhibitor
Length = 364
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 83/309 (26%), Positives = 138/309 (44%), Gaps = 56/309 (18%)
Query: 375 LLQRYSVGQIIGDGNFAVVRQVYDKHKDMDCALKIIDK---SKLLGKKQMIENEVNILRS 431
+L+RY + IG G +V YD D + A+K + + ++ K+ E+ +++
Sbjct: 23 VLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAY--RELVLMKC 80
Query: 432 VNHPNIIKLLDEYDTNNEL------YLVIELIKGGDLFDAISKNVKFSEEDSKFMTQSLA 485
VNH NII LL+ + L YLV+EL+ +L I ++ E ++ +
Sbjct: 81 VNHKNIISLLNVFTPQKTLEEFQDVYLVMELM-DANLCQVI--QMELDHERMSYLLYQML 137
Query: 486 SALSYLHDNYIVHRDIKPENLLVEMSGCHVKVLKVGDFGLAQRVLRP--MFTVCGTPTYV 543
+ +LH I+HRD+KP N++V+ S C +K+L DFGLA+ M T Y
Sbjct: 138 CGIKHLHSAGIIHRDLKPSNIVVK-SDCTLKIL---DFGLARTAGTSFMMTPYVVTRYYR 193
Query: 544 APEILNESGYGVKIDVWAAGVIL------YILLCG-----------------FPPFVSDT 580
APE++ GY +D+W+ G I+ IL G P F+
Sbjct: 194 APEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKL 253
Query: 581 NDQDELFDDILSGQYG--FPSPYWDDI-----------SEEAKELISHMLESNPDLRFSA 627
+ + G FP + D + + +A++L+S ML +P R S
Sbjct: 254 QPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISV 313
Query: 628 EDVLDHPWL 636
+D L HP++
Sbjct: 314 DDALQHPYI 322
>pdb|3PTG|A Chain A, Design And Synthesis Of A Novel, Orally Efficacious
Tri-Substituted Thiophene Based Jnk Inhibitor
Length = 363
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 83/309 (26%), Positives = 138/309 (44%), Gaps = 56/309 (18%)
Query: 375 LLQRYSVGQIIGDGNFAVVRQVYDKHKDMDCALKIIDK---SKLLGKKQMIENEVNILRS 431
+L+RY + IG G +V YD D + A+K + + ++ K+ E+ +++
Sbjct: 22 VLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAY--RELVLMKC 79
Query: 432 VNHPNIIKLLDEYDTNNEL------YLVIELIKGGDLFDAISKNVKFSEEDSKFMTQSLA 485
VNH NII LL+ + L YLV+EL+ +L I ++ E ++ +
Sbjct: 80 VNHKNIISLLNVFTPQKTLEEFQDVYLVMELM-DANLCQVI--QMELDHERMSYLLYQML 136
Query: 486 SALSYLHDNYIVHRDIKPENLLVEMSGCHVKVLKVGDFGLAQRVLRP--MFTVCGTPTYV 543
+ +LH I+HRD+KP N++V+ S C +K+L DFGLA+ M T Y
Sbjct: 137 CGIKHLHSAGIIHRDLKPSNIVVK-SDCTLKIL---DFGLARTAGTSFMMTPYVVTRYYR 192
Query: 544 APEILNESGYGVKIDVWAAGVIL------YILLCG-----------------FPPFVSDT 580
APE++ GY +D+W+ G I+ IL G P F+
Sbjct: 193 APEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKL 252
Query: 581 NDQDELFDDILSGQYG--FPSPYWDDI-----------SEEAKELISHMLESNPDLRFSA 627
+ + G FP + D + + +A++L+S ML +P R S
Sbjct: 253 QPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISV 312
Query: 628 EDVLDHPWL 636
+D L HP++
Sbjct: 313 DDALQHPYI 321
>pdb|2O0U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-{3-Cyano-6-[3-(1-
Piperidinyl)propanoyl]-4,5,6,7-Tetrahydrothieno[2,
3-C]pyridin-2-Yl}- 1-Naphthalenecarboxamide
pdb|2O2U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-(3-Cyano-4,5,6,7-
Tetrahydro-1-Benzothien-2-Yl)-2-Fluorobenzamide
pdb|2ZDT|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|2ZDU|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|3DA6|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-(3-Methyl-
4-(3-(2-(Methylamino)pyrimidin-4-Yl)pyridin-2-Yloxy)
Naphthalen-1-Yl)-1h-Benzo[d]imidazol-2-Amine
pdb|2WAJ|A Chain A, Crystal Structure Of Human Jnk3 Complexed With A
1-Aryl-3,4- Dihydroisoquinoline Inhibitor
pdb|3V6R|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6R|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6S|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6S|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
Length = 364
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 83/309 (26%), Positives = 138/309 (44%), Gaps = 56/309 (18%)
Query: 375 LLQRYSVGQIIGDGNFAVVRQVYDKHKDMDCALKIIDK---SKLLGKKQMIENEVNILRS 431
+L+RY + IG G +V YD D + A+K + + ++ K+ E+ +++
Sbjct: 22 VLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAY--RELVLMKC 79
Query: 432 VNHPNIIKLLDEYDTNNEL------YLVIELIKGGDLFDAISKNVKFSEEDSKFMTQSLA 485
VNH NII LL+ + L YLV+EL+ +L I ++ E ++ +
Sbjct: 80 VNHKNIISLLNVFTPQKTLEEFQDVYLVMELM-DANLCQVI--QMELDHERMSYLLYQML 136
Query: 486 SALSYLHDNYIVHRDIKPENLLVEMSGCHVKVLKVGDFGLAQRVLRP--MFTVCGTPTYV 543
+ +LH I+HRD+KP N++V+ S C +K+L DFGLA+ M T Y
Sbjct: 137 CGIKHLHSAGIIHRDLKPSNIVVK-SDCTLKIL---DFGLARTAGTSFMMTPYVVTRYYR 192
Query: 544 APEILNESGYGVKIDVWAAGVIL------YILLCG-----------------FPPFVSDT 580
APE++ GY +D+W+ G I+ IL G P F+
Sbjct: 193 APEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKL 252
Query: 581 NDQDELFDDILSGQYG--FPSPYWDDI-----------SEEAKELISHMLESNPDLRFSA 627
+ + G FP + D + + +A++L+S ML +P R S
Sbjct: 253 QPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISV 312
Query: 628 EDVLDHPWL 636
+D L HP++
Sbjct: 313 DDALQHPYI 321
>pdb|4G31|A Chain A, Crystal Structure Of Gsk6414 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.28 A Resolution
pdb|4G34|A Chain A, Crystal Structure Of Gsk6924 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.70 A Resolution
Length = 299
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 62/221 (28%), Positives = 102/221 (46%), Gaps = 34/221 (15%)
Query: 383 QIIGDGNFAVVRQVYDKHKDMDCALKIIDKSKLLGKKQMIENEVNILRSVNHPNIIKLLD 442
Q +G G F VV + +K D + A+K I ++ + EV L + HP I++ +
Sbjct: 11 QCLGRGGFGVVFEAKNKVDDCNYAIKRIRLPNRELAREKVMREVKALAKLEHPGIVRYFN 70
Query: 443 EYDTNNE------------LYLVIELIKGGDLFDAISKNVKFSEEDSKFMTQ---SLASA 487
+ N LY+ ++L + +L D ++ E + +A A
Sbjct: 71 AWLEKNTTEKLQPSSPKVYLYIQMQLCRKENLKDWMNGRCTIEERERSVCLHIFLQIAEA 130
Query: 488 LSYLHDNYIVHRDIKPENLLVEMSGCHVKVLKVGDFGLA---------QRVLRPMFTVC- 537
+ +LH ++HRD+KP N+ M V+KVGDFGL Q VL PM
Sbjct: 131 VEFLHSKGLMHRDLKPSNIFFTMDD----VVKVGDFGLVTAMDQDEEEQTVLTPMPAYAR 186
Query: 538 -----GTPTYVAPEILNESGYGVKIDVWAAGVILYILLCGF 573
GT Y++PE ++ + Y K+D+++ G+IL+ LL F
Sbjct: 187 HTGQVGTKLYMSPEQIHGNSYSHKVDIFSLGLILFELLYPF 227
>pdb|3OXI|A Chain A, Design And Synthesis Of Disubstituted Thiophene And
Thiazole Based Inhibitors Of Jnk For The Treatment Of
Neurodegenerative Diseases
pdb|3OY1|A Chain A, Highly Selective C-Jun N-Terminal Kinase (Jnk) 2 And 3
Inhibitors With In Vitro Cns-Like Pharmacokinetic
Properties
Length = 362
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 83/309 (26%), Positives = 138/309 (44%), Gaps = 56/309 (18%)
Query: 375 LLQRYSVGQIIGDGNFAVVRQVYDKHKDMDCALKIIDK---SKLLGKKQMIENEVNILRS 431
+L+RY + IG G +V YD D + A+K + + ++ K+ E+ +++
Sbjct: 21 VLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAY--RELVLMKC 78
Query: 432 VNHPNIIKLLDEYDTNNEL------YLVIELIKGGDLFDAISKNVKFSEEDSKFMTQSLA 485
VNH NII LL+ + L YLV+EL+ +L I ++ E ++ +
Sbjct: 79 VNHKNIISLLNVFTPQKTLEEFQDVYLVMELM-DANLCQVI--QMELDHERMSYLLYQML 135
Query: 486 SALSYLHDNYIVHRDIKPENLLVEMSGCHVKVLKVGDFGLAQRVLRP--MFTVCGTPTYV 543
+ +LH I+HRD+KP N++V+ S C +K+L DFGLA+ M T Y
Sbjct: 136 CGIKHLHSAGIIHRDLKPSNIVVK-SDCTLKIL---DFGLARTAGTSFMMTPYVVTRYYR 191
Query: 544 APEILNESGYGVKIDVWAAGVIL------YILLCG-----------------FPPFVSDT 580
APE++ GY +D+W+ G I+ IL G P F+
Sbjct: 192 APEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKL 251
Query: 581 NDQDELFDDILSGQYG--FPSPYWDDI-----------SEEAKELISHMLESNPDLRFSA 627
+ + G FP + D + + +A++L+S ML +P R S
Sbjct: 252 QPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISV 311
Query: 628 EDVLDHPWL 636
+D L HP++
Sbjct: 312 DDALQHPYI 320
>pdb|3BKB|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)
pdb|3CBL|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (v- Fes) In Complex With Staurosporine And A
Consensus Peptide
pdb|4E93|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)in Complex With Tae684
Length = 377
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 59/214 (27%), Positives = 100/214 (46%), Gaps = 11/214 (5%)
Query: 381 VGQIIGDGNFAVVRQVYDKHKDMDCALKIIDKSKLLGKKQMIENEVNILRSVNHPNIIKL 440
+G+ IG GNF V + + A+K ++ K E IL+ +HPNI++L
Sbjct: 118 LGEQIGRGNFGEVFSGRLRADNTLVAVKSCRETLPPDLKAKFLQEARILKQYSHPNIVRL 177
Query: 441 LDEYDTNNELYLVIELIKGGDLFDAI-SKNVKFSEEDSKFMTQSLASALSYLHDNYIVHR 499
+ +Y+V+EL++GGD + ++ + + M A+ + YL +HR
Sbjct: 178 IGVCTQKQPIYIVMELVQGGDFLTFLRTEGARLRVKTLLQMVGDAAAGMEYLESKCCIHR 237
Query: 500 DIKPENLLVEMSGCHVKVLKVGDFGLAQRVLRPMFTVCG----TPT-YVAPEILNESGYG 554
D+ N LV VLK+ DFG+++ ++ G P + APE LN Y
Sbjct: 238 DLAARNCLV----TEKNVLKISDFGMSREEADGVYAASGGLRQVPVKWTAPEALNYGRYS 293
Query: 555 VKIDVWAAGVILY-ILLCGFPPFVSDTNDQDELF 587
+ DVW+ G++L+ G P+ + +N Q F
Sbjct: 294 SESDVWSFGILLWETFSLGASPYPNLSNQQTREF 327
>pdb|4H36|A Chain A, Crystal Structure Of Jnk3 In Complex With Atf2 Peptide
pdb|4H39|A Chain A, Crystal Structure Of Jnk3 In Complex With Jip1 Peptide
pdb|4H3B|A Chain A, Crystal Structure Of Jnk3 In Complex With Sab Peptide
pdb|4H3B|C Chain C, Crystal Structure Of Jnk3 In Complex With Sab Peptide
Length = 356
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 83/309 (26%), Positives = 138/309 (44%), Gaps = 56/309 (18%)
Query: 375 LLQRYSVGQIIGDGNFAVVRQVYDKHKDMDCALKIIDK---SKLLGKKQMIENEVNILRS 431
+L+RY + IG G +V YD D + A+K + + ++ K+ E+ +++
Sbjct: 16 VLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAY--RELVLMKC 73
Query: 432 VNHPNIIKLLDEYDTNNEL------YLVIELIKGGDLFDAISKNVKFSEEDSKFMTQSLA 485
VNH NII LL+ + L YLV+EL+ +L I ++ E ++ +
Sbjct: 74 VNHKNIISLLNVFTPQKTLEEFQDVYLVMELM-DANLCQVI--QMELDHERMSYLLYQML 130
Query: 486 SALSYLHDNYIVHRDIKPENLLVEMSGCHVKVLKVGDFGLAQRVLRP--MFTVCGTPTYV 543
+ +LH I+HRD+KP N++V+ S C +K+L DFGLA+ M T Y
Sbjct: 131 CGIKHLHSAGIIHRDLKPSNIVVK-SDCTLKIL---DFGLARTAGTSFMMTPYVVTRYYR 186
Query: 544 APEILNESGYGVKIDVWAAGVIL------YILLCG-----------------FPPFVSDT 580
APE++ GY +D+W+ G I+ IL G P F+
Sbjct: 187 APEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKL 246
Query: 581 NDQDELFDDILSGQYG--FPSPYWDDI-----------SEEAKELISHMLESNPDLRFSA 627
+ + G FP + D + + +A++L+S ML +P R S
Sbjct: 247 QPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISV 306
Query: 628 EDVLDHPWL 636
+D L HP++
Sbjct: 307 DDALQHPYI 315
>pdb|2Y4I|C Chain C, Ksr2-Mek1 Heterodimer
Length = 395
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 62/232 (26%), Positives = 115/232 (49%), Gaps = 17/232 (7%)
Query: 375 LLQRYSVGQI----------IGDGNFAVVRQVYDKHKDMDCALKIIDKSKLLGKKQMIEN 424
L Q+ VG++ +G GN VV +V K + A K+I + I
Sbjct: 56 LTQKQKVGELKDDDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIR 115
Query: 425 EVNILRSVNHPNIIKLLDEYDTNNELYLVIELIKGGDLFDAISKNVKFSEEDSKFMTQSL 484
E+ +L N P I+ + ++ E+ + +E + GG L + K + E+ ++ ++
Sbjct: 116 ELQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAV 175
Query: 485 ASALSYLHDNY-IVHRDIKPENLLVEMSGCHVKVLKVGDFGLAQRVLRPMF-TVCGTPTY 542
L+YL + + I+HRD+KP N+LV G +K+ DFG++ +++ M + GT +Y
Sbjct: 176 IKGLTYLREKHKIMHRDVKPSNILVNSRG----EIKLCDFGVSGQLIDSMANSFVGTRSY 231
Query: 543 VAPEILNESGYGVKIDVWAAGVILYILLCG-FPPFVSDTNDQDELFDDILSG 593
++PE L + Y V+ D+W+ G+ L + G +P D + + +F + G
Sbjct: 232 MSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPIPPPDAKELELMFGCQVEG 283
>pdb|2OK1|A Chain A, Crystal Structure Of Jnk3 Bound To N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2P33|A Chain A, Synthesis And Sar Of Aminopyrimidines As Novel C-Jun N-
Terminal Kinase (Jnk) Inhibitors
pdb|3CGF|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment
Of Imidazo[1,2 A]pyridine Binding
pdb|3CGO|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment
Of Imidazo[1,2 A]pyridine Binding
pdb|3G90|X Chain X, Jnk-3 Bound To
(Z)-5-Fluoro-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)
Methyl)-3-(Hydroxyimino)indolin-2-One
pdb|3G9N|A Chain A, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Phenylindolin-2-One
pdb|3G9L|X Chain X, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Styrylindolin-2-One
Length = 365
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 83/309 (26%), Positives = 138/309 (44%), Gaps = 56/309 (18%)
Query: 375 LLQRYSVGQIIGDGNFAVVRQVYDKHKDMDCALKIIDK---SKLLGKKQMIENEVNILRS 431
+L+RY + IG G +V YD D + A+K + + ++ K+ E+ +++
Sbjct: 23 VLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAY--RELVLMKC 80
Query: 432 VNHPNIIKLLDEYDTNNEL------YLVIELIKGGDLFDAISKNVKFSEEDSKFMTQSLA 485
VNH NII LL+ + L YLV+EL+ +L I ++ E ++ +
Sbjct: 81 VNHKNIISLLNVFTPQKTLEEFQDVYLVMELM-DANLCQVI--QMELDHERMSYLLYQML 137
Query: 486 SALSYLHDNYIVHRDIKPENLLVEMSGCHVKVLKVGDFGLAQRVLRP--MFTVCGTPTYV 543
+ +LH I+HRD+KP N++V+ S C +K+L DFGLA+ M T Y
Sbjct: 138 CGIKHLHSAGIIHRDLKPSNIVVK-SDCTLKIL---DFGLARTAGTSFMMTPYVVTRYYR 193
Query: 544 APEILNESGYGVKIDVWAAGVIL------YILLCG-----------------FPPFVSDT 580
APE++ GY +D+W+ G I+ IL G P F+
Sbjct: 194 APEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKL 253
Query: 581 NDQDELFDDILSGQYG--FPSPYWDDI-----------SEEAKELISHMLESNPDLRFSA 627
+ + G FP + D + + +A++L+S ML +P R S
Sbjct: 254 QPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISV 313
Query: 628 EDVLDHPWL 636
+D L HP++
Sbjct: 314 DDALQHPYI 322
>pdb|2EXC|X Chain X, Inhibitor Complex Of Jnk3
Length = 356
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 83/309 (26%), Positives = 138/309 (44%), Gaps = 56/309 (18%)
Query: 375 LLQRYSVGQIIGDGNFAVVRQVYDKHKDMDCALKIIDK---SKLLGKKQMIENEVNILRS 431
+L+RY + IG G +V YD D + A+K + + ++ K+ E+ +++
Sbjct: 16 VLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAY--RELVLMKC 73
Query: 432 VNHPNIIKLLDEYDTNNEL------YLVIELIKGGDLFDAISKNVKFSEEDSKFMTQSLA 485
VNH NII LL+ + L YLV+EL+ +L I ++ E ++ +
Sbjct: 74 VNHKNIISLLNVFTPQKTLEEFQDVYLVMELM-DANLCQVI--QMELDHERMSYLLYQML 130
Query: 486 SALSYLHDNYIVHRDIKPENLLVEMSGCHVKVLKVGDFGLAQRVLRP--MFTVCGTPTYV 543
+ +LH I+HRD+KP N++V+ S C +K+L DFGLA+ M T Y
Sbjct: 131 CGIKHLHSAGIIHRDLKPSNIVVK-SDCTLKIL---DFGLARTAGTSFMMTPYVVTRYYR 186
Query: 544 APEILNESGYGVKIDVWAAGVIL------YILLCG-----------------FPPFVSDT 580
APE++ GY +D+W+ G I+ IL G P F+
Sbjct: 187 APEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKL 246
Query: 581 NDQDELFDDILSGQYG--FPSPYWDDI-----------SEEAKELISHMLESNPDLRFSA 627
+ + G FP + D + + +A++L+S ML +P R S
Sbjct: 247 QPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISV 306
Query: 628 EDVLDHPWL 636
+D L HP++
Sbjct: 307 DDALQHPYI 315
>pdb|2B1P|A Chain A, Inhibitor Complex Of Jnk3
Length = 355
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 83/309 (26%), Positives = 138/309 (44%), Gaps = 56/309 (18%)
Query: 375 LLQRYSVGQIIGDGNFAVVRQVYDKHKDMDCALKIIDK---SKLLGKKQMIENEVNILRS 431
+L+RY + IG G +V YD D + A+K + + ++ K+ E+ +++
Sbjct: 15 VLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAY--RELVLMKC 72
Query: 432 VNHPNIIKLLDEYDTNNEL------YLVIELIKGGDLFDAISKNVKFSEEDSKFMTQSLA 485
VNH NII LL+ + L YLV+EL+ +L I ++ E ++ +
Sbjct: 73 VNHKNIISLLNVFTPQKTLEEFQDVYLVMELM-DANLCQVI--QMELDHERMSYLLYQML 129
Query: 486 SALSYLHDNYIVHRDIKPENLLVEMSGCHVKVLKVGDFGLAQRVLRP--MFTVCGTPTYV 543
+ +LH I+HRD+KP N++V+ S C +K+L DFGLA+ M T Y
Sbjct: 130 CGIKHLHSAGIIHRDLKPSNIVVK-SDCTLKIL---DFGLARTAGTSFMMTPYVVTRYYR 185
Query: 544 APEILNESGYGVKIDVWAAGVIL------YILLCG-----------------FPPFVSDT 580
APE++ GY +D+W+ G I+ IL G P F+
Sbjct: 186 APEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKL 245
Query: 581 NDQDELFDDILSGQYG--FPSPYWDDI-----------SEEAKELISHMLESNPDLRFSA 627
+ + G FP + D + + +A++L+S ML +P R S
Sbjct: 246 QPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISV 305
Query: 628 EDVLDHPWL 636
+D L HP++
Sbjct: 306 DDALQHPYI 314
>pdb|1ZXE|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|E Chain E, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|F Chain F, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
Length = 303
Score = 87.0 bits (214), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 74/286 (25%), Positives = 132/286 (46%), Gaps = 44/286 (15%)
Query: 384 IIGDGNFAVVRQVYDKHKDMDCALKIIDKSKLLGKK-QMIENEVNILRSVNHP------- 435
++G G F QV +D I K + +K I +EV +L S+NH
Sbjct: 13 VLGQGAFG---QVVKARNALDSRYYAIKKIRHTEEKLSTILSEVXLLASLNHQYVVRYYA 69
Query: 436 ------NIIKLLDEYDTNNELYLVIELIKGGDLFDAI-SKNVKFSEEDSKFMTQSLASAL 488
N +K + L++ E + L+D I S+N+ ++ + + + AL
Sbjct: 70 AWLERRNFVKPXTAVKKKSTLFIQXEYCENRTLYDLIHSENLNQQRDEYWRLFRQILEAL 129
Query: 489 SYLHDNYIVHRDIKPENLLVEMSGCHVKVLKVGDFGLAQRVLRP---------------- 532
SY+H I+HR++KP N+ ++ S + +K+GDFGLA+ V R
Sbjct: 130 SYIHSQGIIHRNLKPXNIFIDES----RNVKIGDFGLAKNVHRSLDILKLDSQNLPGSSD 185
Query: 533 -MFTVCGTPTYVAPEILNESG-YGVKIDVWAAGVILYILLCGFPPFVSDTNDQDELFDDI 590
+ + GT YVA E+L+ +G Y KID ++ G+I + + F S ++ + +
Sbjct: 186 NLTSAIGTAXYVATEVLDGTGHYNEKIDXYSLGIIFFEXIYPF----STGXERVNILKKL 241
Query: 591 LSGQYGFPSPYWDDISEEAKELISHMLESNPDLRFSAEDVLDHPWL 636
S FP + D+ + K++I +++ +P+ R A +L+ WL
Sbjct: 242 RSVSIEFPPDFDDNKXKVEKKIIRLLIDHDPNKRPGARTLLNSGWL 287
>pdb|3S95|A Chain A, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
pdb|3S95|B Chain B, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
Length = 310
Score = 86.7 bits (213), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 58/213 (27%), Positives = 104/213 (48%), Gaps = 27/213 (12%)
Query: 372 PSKLLQRYSVGQIIGDGNFAVVRQVYDKHKDMDCALKIIDKSKLLGKKQMIENEVNILRS 431
PS L+ G+++G G F +V + +K + + ++ ++ EV ++R
Sbjct: 9 PSDLIH----GEVLGKGCFGQAIKVTHRETGEVMVMKELIRFDEETQRTFLK-EVKVMRC 63
Query: 432 VNHPNIIKLLDEYDTNNELYLVIELIKGGDLFDAI-SKNVKFSEEDSKFMTQSLASALSY 490
+ HPN++K + + L + E IKGG L I S + ++ + +AS ++Y
Sbjct: 64 LEHPNVLKFIGVLYKDKRLNFITEYIKGGTLRGIIKSMDSQYPWSQRVSFAKDIASGMAY 123
Query: 491 LHDNYIVHRDIKPENLLVEMSGCHVKVLKVGDFGLAQRVL-----------------RPM 533
LH I+HRD+ N LV + K + V DFGLA+ ++ +
Sbjct: 124 LHSMNIIHRDLNSHNCLVREN----KNVVVADFGLARLMVDEKTQPEGLRSLKKPDRKKR 179
Query: 534 FTVCGTPTYVAPEILNESGYGVKIDVWAAGVIL 566
+TV G P ++APE++N Y K+DV++ G++L
Sbjct: 180 YTVVGNPYWMAPEMINGRSYDEKVDVFSFGIVL 212
>pdb|3GBZ|A Chain A, Structure Of The Cmgc Cdk Kinase From Giardia Lamblia
pdb|3GC0|A Chain A, Structure Of The Cmgc Cdk Kinase From Giardia Lamblia In
Complex With Amp
Length = 329
Score = 86.7 bits (213), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 81/292 (27%), Positives = 126/292 (43%), Gaps = 33/292 (11%)
Query: 376 LQRYSVGQIIGDGNFAVVRQVYDKHKDMDCALKIID-KSKLLGKKQMIENEVNILRSVNH 434
+ RY +G+G + V + D + A+K I + + G EV++L+ + H
Sbjct: 33 IDRYRRITKLGEGTYGEVYKAIDTVTNETVAIKRIRLEHEEEGVPGTAIREVSLLKELQH 92
Query: 435 PNIIKLLDEYDTNNELYLVIELIKGGDLFDAISKNVKFSEEDSKFMTQSLASALSYLHDN 494
NII+L N+ L+L+ E + DL + KN S K L + +++ H
Sbjct: 93 RNIIELKSVIHHNHRLHLIFEYAEN-DLKKYMDKNPDVSMRVIKSFLYQLINGVNFCHSR 151
Query: 495 YIVHRDIKPENLLVEMS-GCHVKVLKVGDFGLAQRVLRPMFTVCG---TPTYVAPEIL-N 549
+HRD+KP+NLL+ +S VLK+GDFGLA+ P+ T Y PEIL
Sbjct: 152 RCLHRDLKPQNLLLSVSDASETPVLKIGDFGLARAFGIPIRQFTHEIITLWYRPPEILLG 211
Query: 550 ESGYGVKIDVWAAGVILYILLCGFPPFVSDTNDQDELF----------DDILSGQYGFPS 599
Y +D+W+ I +L P F D+ + D+LF D G P
Sbjct: 212 SRHYSTSVDIWSIACIWAEMLMKTPLFPGDS-EIDQLFKIFEVLGLPDDTTWPGVTALPD 270
Query: 600 PYWDDISEEAKEL---------------ISHMLESNPDLRFSAEDVLDHPWL 636
K L ++ MLE +P R SA++ L+HP+
Sbjct: 271 WKQSFPKFRGKTLKRVLGALLDDEGLDLLTAMLEMDPVKRISAKNALEHPYF 322
>pdb|3EQC|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With
Compound 1, Atp-Gs And Mg2p
pdb|3EQD|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Atp-Gs
And Mg2p
pdb|3EQF|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With K252a
And Mg2p
pdb|3EQG|A Chain A, X-ray Structure Of The Human Mitogen-activated Protein
Kinase Kinase 1 (mek1) In A Ternary Complex With Pd, Adp
And Mg2p
pdb|3EQH|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With U0126,
Adp And Mg2p
pdb|3EQI|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Adp And
Mg2p
Length = 360
Score = 86.7 bits (213), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 62/232 (26%), Positives = 115/232 (49%), Gaps = 17/232 (7%)
Query: 375 LLQRYSVGQI----------IGDGNFAVVRQVYDKHKDMDCALKIIDKSKLLGKKQMIEN 424
L Q+ VG++ +G GN VV +V K + A K+I + I
Sbjct: 21 LTQKQKVGELKDDDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIR 80
Query: 425 EVNILRSVNHPNIIKLLDEYDTNNELYLVIELIKGGDLFDAISKNVKFSEEDSKFMTQSL 484
E+ +L N P I+ + ++ E+ + +E + GG L + K + E+ ++ ++
Sbjct: 81 ELQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAV 140
Query: 485 ASALSYLHDNY-IVHRDIKPENLLVEMSGCHVKVLKVGDFGLAQRVLRPMF-TVCGTPTY 542
L+YL + + I+HRD+KP N+LV G +K+ DFG++ +++ M + GT +Y
Sbjct: 141 IKGLTYLREKHKIMHRDVKPSNILVNSRG----EIKLCDFGVSGQLIDSMANSFVGTRSY 196
Query: 543 VAPEILNESGYGVKIDVWAAGVILYILLCG-FPPFVSDTNDQDELFDDILSG 593
++PE L + Y V+ D+W+ G+ L + G +P D + + +F + G
Sbjct: 197 MSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPIPPPDAKELELMFGCQVEG 248
>pdb|2I6L|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 6 (Mapk6)
pdb|2I6L|B Chain B, Crystal Structure Of Human Mitogen Activated Protein
Kinase 6 (Mapk6)
Length = 320
Score = 86.7 bits (213), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 81/284 (28%), Positives = 129/284 (45%), Gaps = 55/284 (19%)
Query: 402 DMDCALKIIDKSKLLGKKQMIEN---EVNILRSVNHPNIIK-----------LLDEYDTN 447
D DC ++ K +L Q +++ E+ I+R ++H NI+K L D+ +
Sbjct: 32 DNDCDKRVAIKKIVLTDPQSVKHALREIKIIRRLDHDNIVKVFEILGPSGSQLTDDVGSL 91
Query: 448 NEL---YLVIELIKGGDLFDAISKNVKFSEEDSKFMTQSLASALSYLHDNYIVHRDIKPE 504
EL Y+V E ++ DL + + + E FM Q L L Y+H ++HRD+KP
Sbjct: 92 TELNSVYIVQEYMET-DLANVLEQGPLLEEHARLFMYQ-LLRGLKYIHSANVLHRDLKPA 149
Query: 505 NLLVEMSGCHVKVLKVGDFGLAQRVLRPMFTVCG-------TPTYVAPE-ILNESGYGVK 556
NL + VLK+GDFGLA R++ P ++ G T Y +P +L+ + Y
Sbjct: 150 NLFINTEDL---VLKIGDFGLA-RIMDPHYSHKGHLSEGLVTKWYRSPRLLLSPNNYTKA 205
Query: 557 IDVWAAGVILYILLCGFPPF-----------------VSDTNDQDELFDDI-------LS 592
ID+WAAG I +L G F V D+ EL I ++
Sbjct: 206 IDMWAAGCIFAEMLTGKTLFAGAHELEQMQLILESIPVVHEEDRQELLSVIPVYIRNDMT 265
Query: 593 GQYGFPSPYWDDISEEAKELISHMLESNPDLRFSAEDVLDHPWL 636
+ + IS EA + + +L +P R +AE+ L HP++
Sbjct: 266 EPHKPLTQLLPGISREAVDFLEQILTFSPMDRLTAEEALSHPYM 309
>pdb|3FPQ|A Chain A, Crystal Structure Of The Kinase Domain Of Wnk1
pdb|3FPQ|B Chain B, Crystal Structure Of The Kinase Domain Of Wnk1
Length = 290
Score = 85.9 bits (211), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 69/262 (26%), Positives = 122/262 (46%), Gaps = 17/262 (6%)
Query: 385 IGDGNFAVVRQVYDKHKDMDCAL-KIIDKSKLLGKKQMIENEVNILRSVNHPNIIKLLDE 443
IG G+F V + D ++ A ++ D+ ++Q + E L+ + HPNI++ D
Sbjct: 34 IGRGSFKTVYKGLDTETTVEVAWCELQDRKLTKSERQRFKEEAEXLKGLQHPNIVRFYDS 93
Query: 444 YDTNNE----LYLVIELIKGGDLFDAISKNVKFSEEDSKFMTQSLASALSYLHDNY--IV 497
+++ + + LV EL G L + + + + + + L +LH I+
Sbjct: 94 WESTVKGKKCIVLVTELXTSGTLKTYLKRFKVXKIKVLRSWCRQILKGLQFLHTRTPPII 153
Query: 498 HRDIKPENLLVEMSGCHVKVLKVGDFGLAQRVLRPMF--TVCGTPTYVAPEILNESGYGV 555
HRD+K +N+ + V K+GD GLA + R F V GTP + APE E Y
Sbjct: 154 HRDLKCDNIFITGPTGSV---KIGDLGLAT-LKRASFAKAVIGTPEFXAPEXYEEK-YDE 208
Query: 556 KIDVWAAGVILYILLCGFPPFVSDTNDQDELFDDILSGQYGFPSPYWDDISEEAKELISH 615
+DV+A G P+ S+ + +++ + SG P+ + E KE+I
Sbjct: 209 SVDVYAFGXCXLEXATSEYPY-SECQNAAQIYRRVTSGVK--PASFDKVAIPEVKEIIEG 265
Query: 616 MLESNPDLRFSAEDVLDHPWLE 637
+ N D R+S +D+L+H + +
Sbjct: 266 CIRQNKDERYSIKDLLNHAFFQ 287
>pdb|2B9H|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Ste7
pdb|2B9I|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Msg5
pdb|2B9J|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Far1
pdb|2F49|A Chain A, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2F49|B Chain B, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2FA2|A Chain A, Crystal Structure Of Fus3 Without A Peptide From Ste5
pdb|2FA2|B Chain B, Crystal Structure Of Fus3 Without A Peptide From Ste5
Length = 353
Score = 85.9 bits (211), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 82/306 (26%), Positives = 135/306 (44%), Gaps = 55/306 (17%)
Query: 379 YSVGQIIGDGNFAVVRQVYDKHKDMDCALKIIDK--SKLLGKKQMIENEVNILRSVNHPN 436
+ + ++G+G + VV K A+K I+ L + + E+ IL+ H N
Sbjct: 13 FQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPFDKPLFALRTL--REIKILKHFKHEN 70
Query: 437 IIKLL-----DEYDTNNELYLVIELIKGGDLFDAISKNVKFSEEDSKFMTQSLASALSYL 491
II + D ++ NE+Y++ EL++ DL IS + + F+ Q+L A+ L
Sbjct: 71 IITIFNIQRPDSFENFNEVYIIQELMQT-DLHRVISTQMLSDDHIQYFIYQTL-RAVKVL 128
Query: 492 HDNYIVHRDIKPENLLVEMSGCHVKVLKVGDFGLAQRV-------------LRPMFTVCG 538
H + ++HRD+KP NLL+ S C LKV DFGLA+ + M
Sbjct: 129 HGSNVIHRDLKPSNLLIN-SNCD---LKVCDFGLARIIDESAADNSEPTGQQSGMVEFVA 184
Query: 539 TPTYVAPEI-LNESGYGVKIDVWAAGVILYILLCGFPPFVS-DTNDQDELFDDILSGQYG 596
T Y APE+ L + Y +DVW+ G IL L P F D Q L I+ +
Sbjct: 185 TRWYRAPEVMLTSAKYSRAMDVWSCGCILAELFLRRPIFPGRDYRHQLLLIFGIIGTPHS 244
Query: 597 ---------------------FPSP----YWDDISEEAKELISHMLESNPDLRFSAEDVL 631
+P+ + ++ + +L+ ML +P R +A++ L
Sbjct: 245 DNDLRCIESPRAREYIKSLPMYPAAPLEKMFPRVNPKGIDLLQRMLVFDPAKRITAKEAL 304
Query: 632 DHPWLE 637
+HP+L+
Sbjct: 305 EHPYLQ 310
>pdb|1S9J|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3DY7|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3E8N|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) Complexed With A Potent Inhibitor
Rdea119 And Mgatp
pdb|3V01|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions.
pdb|3V04|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions
Length = 341
Score = 85.9 bits (211), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 58/212 (27%), Positives = 108/212 (50%), Gaps = 7/212 (3%)
Query: 385 IGDGNFAVVRQVYDKHKDMDCALKIIDKSKLLGKKQMIENEVNILRSVNHPNIIKLLDEY 444
+G GN VV +V K + A K+I + I E+ +L N P I+ +
Sbjct: 14 LGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAF 73
Query: 445 DTNNELYLVIELIKGGDLFDAISKNVKFSEEDSKFMTQSLASALSYLHDNY-IVHRDIKP 503
++ E+ + +E + GG L + K + E+ ++ ++ L+YL + + I+HRD+KP
Sbjct: 74 YSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYLREKHKIMHRDVKP 133
Query: 504 ENLLVEMSGCHVKVLKVGDFGLAQRVLRPMF-TVCGTPTYVAPEILNESGYGVKIDVWAA 562
N+LV G +K+ DFG++ +++ M + GT +Y++PE L + Y V+ D+W+
Sbjct: 134 SNILVNSRG----EIKLCDFGVSGQLIDSMANSFVGTRSYMSPERLQGTHYSVQSDIWSM 189
Query: 563 GVILYILLCG-FPPFVSDTNDQDELFDDILSG 593
G+ L + G +P D + + +F + G
Sbjct: 190 GLSLVEMAVGRYPIPPPDAKELELMFGCQVEG 221
>pdb|3CD3|A Chain A, Crystal Structure Of Phosphorylated Human Feline Sarcoma
Viral Oncogene Homologue (V-Fes) In Complex With
Staurosporine And A Consensus Peptide
Length = 377
Score = 85.9 bits (211), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 59/214 (27%), Positives = 99/214 (46%), Gaps = 11/214 (5%)
Query: 381 VGQIIGDGNFAVVRQVYDKHKDMDCALKIIDKSKLLGKKQMIENEVNILRSVNHPNIIKL 440
+G+ IG GNF V + + A+K ++ K E IL+ +HPNI++L
Sbjct: 118 LGEQIGRGNFGEVFSGRLRADNTLVAVKSCRETLPPDLKAKFLQEARILKQYSHPNIVRL 177
Query: 441 LDEYDTNNELYLVIELIKGGDLFDAI-SKNVKFSEEDSKFMTQSLASALSYLHDNYIVHR 499
+ +Y+V+EL++GGD + ++ + + M A+ + YL +HR
Sbjct: 178 IGVCTQKQPIYIVMELVQGGDFLTFLRTEGARLRVKTLLQMVGDAAAGMEYLESKCCIHR 237
Query: 500 DIKPENLLVEMSGCHVKVLKVGDFGLAQRVLRPMFTVCG----TPT-YVAPEILNESGYG 554
D+ N LV VLK+ DFG+++ + G P + APE LN Y
Sbjct: 238 DLAARNCLV----TEKNVLKISDFGMSREEADGVXAASGGLRQVPVKWTAPEALNYGRYS 293
Query: 555 VKIDVWAAGVILY-ILLCGFPPFVSDTNDQDELF 587
+ DVW+ G++L+ G P+ + +N Q F
Sbjct: 294 SESDVWSFGILLWETFSLGASPYPNLSNQQTREF 327
>pdb|2P55|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3EQB|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
Length = 333
Score = 85.9 bits (211), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 58/212 (27%), Positives = 108/212 (50%), Gaps = 7/212 (3%)
Query: 385 IGDGNFAVVRQVYDKHKDMDCALKIIDKSKLLGKKQMIENEVNILRSVNHPNIIKLLDEY 444
+G GN VV +V K + A K+I + I E+ +L N P I+ +
Sbjct: 14 LGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAF 73
Query: 445 DTNNELYLVIELIKGGDLFDAISKNVKFSEEDSKFMTQSLASALSYLHDNY-IVHRDIKP 503
++ E+ + +E + GG L + K + E+ ++ ++ L+YL + + I+HRD+KP
Sbjct: 74 YSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYLREKHKIMHRDVKP 133
Query: 504 ENLLVEMSGCHVKVLKVGDFGLAQRVLRPMF-TVCGTPTYVAPEILNESGYGVKIDVWAA 562
N+LV G +K+ DFG++ +++ M + GT +Y++PE L + Y V+ D+W+
Sbjct: 134 SNILVNSRG----EIKLCDFGVSGQLIDSMANSFVGTRSYMSPERLQGTHYSVQSDIWSM 189
Query: 563 GVILYILLCG-FPPFVSDTNDQDELFDDILSG 593
G+ L + G +P D + + +F + G
Sbjct: 190 GLSLVEMAVGRYPIPPPDAKELELMFGCQVEG 221
>pdb|3MBL|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgadp
pdb|3PP1|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgatp
Length = 328
Score = 85.5 bits (210), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 57/206 (27%), Positives = 106/206 (51%), Gaps = 7/206 (3%)
Query: 385 IGDGNFAVVRQVYDKHKDMDCALKIIDKSKLLGKKQMIENEVNILRSVNHPNIIKLLDEY 444
+G GN VV +V K + A K+I + I E+ +L N P I+ +
Sbjct: 14 LGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAF 73
Query: 445 DTNNELYLVIELIKGGDLFDAISKNVKFSEEDSKFMTQSLASALSYLHDNY-IVHRDIKP 503
++ E+ + +E + GG L + K + E+ ++ ++ L+YL + + I+HRD+KP
Sbjct: 74 YSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYLREKHKIMHRDVKP 133
Query: 504 ENLLVEMSGCHVKVLKVGDFGLAQRVLRPMF-TVCGTPTYVAPEILNESGYGVKIDVWAA 562
N+LV G +K+ DFG++ +++ M + GT +Y++PE L + Y V+ D+W+
Sbjct: 134 SNILVNSRG----EIKLCDFGVSGQLIDSMANSFVGTRSYMSPERLQGTHYSVQSDIWSM 189
Query: 563 GVILYILLCG-FPPFVSDTNDQDELF 587
G+ L + G +P D + + +F
Sbjct: 190 GLSLVEMAVGRYPIPPPDAKELELMF 215
>pdb|3DV3|A Chain A, Mek1 With Pf-04622664 Bound
Length = 322
Score = 85.5 bits (210), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 57/206 (27%), Positives = 106/206 (51%), Gaps = 7/206 (3%)
Query: 385 IGDGNFAVVRQVYDKHKDMDCALKIIDKSKLLGKKQMIENEVNILRSVNHPNIIKLLDEY 444
+G GN VV +V K + A K+I + I E+ +L N P I+ +
Sbjct: 14 LGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAF 73
Query: 445 DTNNELYLVIELIKGGDLFDAISKNVKFSEEDSKFMTQSLASALSYLHDNY-IVHRDIKP 503
++ E+ + +E + GG L + K + E+ ++ ++ L+YL + + I+HRD+KP
Sbjct: 74 YSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYLREKHKIMHRDVKP 133
Query: 504 ENLLVEMSGCHVKVLKVGDFGLAQRVLRPMF-TVCGTPTYVAPEILNESGYGVKIDVWAA 562
N+LV G +K+ DFG++ +++ M + GT +Y++PE L + Y V+ D+W+
Sbjct: 134 SNILVNSRG----EIKLCDFGVSGQLIDSMANSFVGTRSYMSPERLQGTHYSVQSDIWSM 189
Query: 563 GVILYILLCG-FPPFVSDTNDQDELF 587
G+ L + G +P D + + +F
Sbjct: 190 GLSLVEMAVGRYPIPPPDAKELELMF 215
>pdb|2XS0|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 386
Score = 85.1 bits (209), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 83/316 (26%), Positives = 143/316 (45%), Gaps = 70/316 (22%)
Query: 375 LLQRYSVGQIIGDGNFAVVRQVYDKHKDMDCALKIIDK---SKLLGKKQMIENEVNILRS 431
+L+RY + IG G +V YD + + A+K + + ++ K+ E+ +++
Sbjct: 24 VLKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAY--RELVLMKC 81
Query: 432 VNHPNIIKLLDEYDTNNEL------YLVIELIKGGDLFDAISKNVKFSEEDSKFMTQSLA 485
VNH NII LL+ + L Y+V+EL+ +L I ++ E ++ +
Sbjct: 82 VNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDA-NLCQVI--QMELDHERMSYLLYQML 138
Query: 486 SALSYLHDNYIVHRDIKPENLLVEMSGCHVKVLKVGDFGLAQRVLRPMFTV--CGTPTYV 543
+ +LH I+HRD+KP N++V+ S C +K+L DFGLA+ V T Y
Sbjct: 139 CGIKHLHSAGIIHRDLKPSNIVVK-SDCTLKIL---DFGLARTAGTSFMMVPFVVTRYYR 194
Query: 544 APEILNESGYGVKIDVWAAGVILYILLCG---FPPFVSDTNDQ----------------- 583
APE++ GY +D+W+ G I+ ++ G FP +D DQ
Sbjct: 195 APEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPG--TDHIDQWNKVIEQLGTPCPEFMK 252
Query: 584 ---------------------DELFDDILSGQYGFP--SPYWDDISEEAKELISHMLESN 620
++LF D+L FP S + + +A++L+S ML +
Sbjct: 253 KLQPTVRTYVENRPKYAGYSFEKLFPDVL-----FPADSEHNKLKASQARDLLSKMLVID 307
Query: 621 PDLRFSAEDVLDHPWL 636
R S ++ L HP++
Sbjct: 308 ASKRISVDEALQHPYI 323
>pdb|2F9G|A Chain A, Crystal Structure Of Fus3 Phosphorylated On Tyr182
Length = 353
Score = 85.1 bits (209), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 82/306 (26%), Positives = 135/306 (44%), Gaps = 55/306 (17%)
Query: 379 YSVGQIIGDGNFAVVRQVYDKHKDMDCALKIIDK--SKLLGKKQMIENEVNILRSVNHPN 436
+ + ++G+G + VV K A+K I+ L + + E+ IL+ H N
Sbjct: 13 FQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPFDKPLFALRTL--REIKILKHFKHEN 70
Query: 437 IIKLL-----DEYDTNNELYLVIELIKGGDLFDAISKNVKFSEEDSKFMTQSLASALSYL 491
II + D ++ NE+Y++ EL++ DL IS + + F+ Q+L A+ L
Sbjct: 71 IITIFNIQRPDSFENFNEVYIIQELMQT-DLHRVISTQMLSDDHIQYFIYQTL-RAVKVL 128
Query: 492 HDNYIVHRDIKPENLLVEMSGCHVKVLKVGDFGLAQRV-------------LRPMFTVCG 538
H + ++HRD+KP NLL+ S C LKV DFGLA+ + M
Sbjct: 129 HGSNVIHRDLKPSNLLIN-SNCD---LKVCDFGLARIIDESAADNSEPTGQQSGMTEXVA 184
Query: 539 TPTYVAPEI-LNESGYGVKIDVWAAGVILYILLCGFPPFVS-DTNDQDELFDDILSGQYG 596
T Y APE+ L + Y +DVW+ G IL L P F D Q L I+ +
Sbjct: 185 TRWYRAPEVMLTSAKYSRAMDVWSCGCILAELFLRRPIFPGRDYRHQLLLIFGIIGTPHS 244
Query: 597 ---------------------FPSP----YWDDISEEAKELISHMLESNPDLRFSAEDVL 631
+P+ + ++ + +L+ ML +P R +A++ L
Sbjct: 245 DNDLRCIESPRAREYIKSLPMYPAAPLEKMFPRVNPKGIDLLQRMLVFDPAKRITAKEAL 304
Query: 632 DHPWLE 637
+HP+L+
Sbjct: 305 EHPYLQ 310
>pdb|2B9F|A Chain A, Crystal Structure Of Non-Phosphorylated Fus3
Length = 353
Score = 85.1 bits (209), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 82/306 (26%), Positives = 135/306 (44%), Gaps = 55/306 (17%)
Query: 379 YSVGQIIGDGNFAVVRQVYDKHKDMDCALKIIDK--SKLLGKKQMIENEVNILRSVNHPN 436
+ + ++G+G + VV K A+K I+ L + + E+ IL+ H N
Sbjct: 13 FQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPFDKPLFALRTL--REIKILKHFKHEN 70
Query: 437 IIKLL-----DEYDTNNELYLVIELIKGGDLFDAISKNVKFSEEDSKFMTQSLASALSYL 491
II + D ++ NE+Y++ EL++ DL IS + + F+ Q+L A+ L
Sbjct: 71 IITIFNIQRPDSFENFNEVYIIQELMQT-DLHRVISTQMLSDDHIQYFIYQTL-RAVKVL 128
Query: 492 HDNYIVHRDIKPENLLVEMSGCHVKVLKVGDFGLAQRV-------------LRPMFTVCG 538
H + ++HRD+KP NLL+ S C LKV DFGLA+ + M
Sbjct: 129 HGSNVIHRDLKPSNLLIN-SNCD---LKVCDFGLARIIDESAADNSEPTGQQSGMTEYVA 184
Query: 539 TPTYVAPEI-LNESGYGVKIDVWAAGVILYILLCGFPPFVS-DTNDQDELFDDILSGQYG 596
T Y APE+ L + Y +DVW+ G IL L P F D Q L I+ +
Sbjct: 185 TRWYRAPEVMLTSAKYSRAMDVWSCGCILAELFLRRPIFPGRDYRHQLLLIFGIIGTPHS 244
Query: 597 ---------------------FPSP----YWDDISEEAKELISHMLESNPDLRFSAEDVL 631
+P+ + ++ + +L+ ML +P R +A++ L
Sbjct: 245 DNDLRCIESPRAREYIKSLPMYPAAPLEKMFPRVNPKGIDLLQRMLVFDPAKRITAKEAL 304
Query: 632 DHPWLE 637
+HP+L+
Sbjct: 305 EHPYLQ 310
>pdb|3FI2|A Chain A, Crystal Structure Of Jnk3 With Amino-Pyrazole Inhibitor,
Sr- 3451
Length = 353
Score = 84.7 bits (208), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 81/309 (26%), Positives = 135/309 (43%), Gaps = 56/309 (18%)
Query: 375 LLQRYSVGQIIGDGNFAVVRQVYDKHKDMDCALKIIDK---SKLLGKKQMIENEVNILRS 431
+L+RY + IG G +V YD D + A+K + + ++ K+ E+ +++
Sbjct: 22 VLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAY--RELVLMKX 79
Query: 432 VNHPNIIKLLDEYDTNNEL------YLVIELIKGGDLFDAISKNVKFSEEDSKFMTQSLA 485
VNH NII LL+ + L YLV+EL+ +L I ++ E ++ +
Sbjct: 80 VNHKNIISLLNVFTPQKTLEEFQDVYLVMELM-DANLCQVI--QMELDHERMSYLLYQML 136
Query: 486 SALSYLHDNYIVHRDIKPENLLVEMSGCHVKVLKVGDFGLAQRVLRP--MFTVCGTPTYV 543
+ +LH I+HRD+KP N++V+ LK+ DFGLA+ M T Y
Sbjct: 137 CGIKHLHSAGIIHRDLKPSNIVVKSD----XTLKILDFGLARTAGTSFMMTPYVVTRYYR 192
Query: 544 APEILNESGYGVKIDVWAAGVIL------YILLCG-----------------FPPFVSDT 580
APE++ GY +D+W+ G I+ IL G P F+
Sbjct: 193 APEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKL 252
Query: 581 NDQDELFDDILSGQYG--FPSPYWDDI-----------SEEAKELISHMLESNPDLRFSA 627
+ + G FP + D + + +A++L+S ML +P R S
Sbjct: 253 QPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISV 312
Query: 628 EDVLDHPWL 636
+D L HP++
Sbjct: 313 DDALQHPYI 321
>pdb|3FV8|A Chain A, Jnk3 Bound To Piperazine Amide Inhibitor, Sr2774
Length = 355
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 81/309 (26%), Positives = 135/309 (43%), Gaps = 56/309 (18%)
Query: 375 LLQRYSVGQIIGDGNFAVVRQVYDKHKDMDCALKIIDK---SKLLGKKQMIENEVNILRS 431
+L+RY + IG G +V YD D + A+K + + ++ K+ E+ +++
Sbjct: 22 VLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAY--RELVLMKX 79
Query: 432 VNHPNIIKLLDEYDTNNEL------YLVIELIKGGDLFDAISKNVKFSEEDSKFMTQSLA 485
VNH NII LL+ + L YLV+EL+ +L I ++ E ++ +
Sbjct: 80 VNHKNIISLLNVFTPQKTLEEFQDVYLVMELM-DANLXQVI--QMELDHERMSYLLYQML 136
Query: 486 SALSYLHDNYIVHRDIKPENLLVEMSGCHVKVLKVGDFGLAQRVLRP--MFTVCGTPTYV 543
+ +LH I+HRD+KP N++V+ LK+ DFGLA+ M T Y
Sbjct: 137 CGIKHLHSAGIIHRDLKPSNIVVKSD----XTLKILDFGLARTAGTSFMMTPYVVTRYYR 192
Query: 544 APEILNESGYGVKIDVWAAGVIL------YILLCG-----------------FPPFVSDT 580
APE++ GY +D+W+ G I+ IL G P F+
Sbjct: 193 APEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKL 252
Query: 581 NDQDELFDDILSGQYG--FPSPYWDDI-----------SEEAKELISHMLESNPDLRFSA 627
+ + G FP + D + + +A++L+S ML +P R S
Sbjct: 253 QPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISV 312
Query: 628 EDVLDHPWL 636
+D L HP++
Sbjct: 313 DDALQHPYI 321
>pdb|3FI3|A Chain A, Crystal Structure Of Jnk3 With Indazole Inhibitor, Sr-3737
Length = 364
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 81/309 (26%), Positives = 135/309 (43%), Gaps = 56/309 (18%)
Query: 375 LLQRYSVGQIIGDGNFAVVRQVYDKHKDMDCALKIIDK---SKLLGKKQMIENEVNILRS 431
+L+RY + IG G +V YD D + A+K + + ++ K+ E+ +++
Sbjct: 22 VLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAY--RELVLMKX 79
Query: 432 VNHPNIIKLLDEYDTNNEL------YLVIELIKGGDLFDAISKNVKFSEEDSKFMTQSLA 485
VNH NII LL+ + L YLV+EL+ +L I ++ E ++ +
Sbjct: 80 VNHKNIISLLNVFTPQKTLEEFQDVYLVMELM-DANLXQVI--QMELDHERMSYLLYQML 136
Query: 486 SALSYLHDNYIVHRDIKPENLLVEMSGCHVKVLKVGDFGLAQRVLRP--MFTVCGTPTYV 543
+ +LH I+HRD+KP N++V+ LK+ DFGLA+ M T Y
Sbjct: 137 XGIKHLHSAGIIHRDLKPSNIVVKSD----XTLKILDFGLARTAGTSFMMTPYVVTRYYR 192
Query: 544 APEILNESGYGVKIDVWAAGVIL------YILLCG-----------------FPPFVSDT 580
APE++ GY +D+W+ G I+ IL G P F+
Sbjct: 193 APEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKL 252
Query: 581 NDQDELFDDILSGQYG--FPSPYWDDI-----------SEEAKELISHMLESNPDLRFSA 627
+ + G FP + D + + +A++L+S ML +P R S
Sbjct: 253 QPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISV 312
Query: 628 EDVLDHPWL 636
+D L HP++
Sbjct: 313 DDALQHPYI 321
>pdb|3O17|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform
pdb|3O17|B Chain B, Crystal Structure Of Jnk1-Alpha1 Isoform
pdb|3O2M|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform Complex With A
Biaryl Tetrazol (A-82118)
pdb|3O2M|B Chain B, Crystal Structure Of Jnk1-Alpha1 Isoform Complex With A
Biaryl Tetrazol (A-82118)
Length = 370
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 82/317 (25%), Positives = 145/317 (45%), Gaps = 72/317 (22%)
Query: 375 LLQRYSVGQIIGDGNFAVVRQVYDKHKDMDCALKIIDK---SKLLGKKQMIENEVNILRS 431
+L+RY + IG G +V YD + + A+K + + ++ K+ E+ +++
Sbjct: 22 VLKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAY--RELVLMKC 79
Query: 432 VNHPNIIKLLDEYDTNNEL------YLVIELIKGGDLFDAISKNVKFSEEDSKFMTQSLA 485
VNH NII LL+ + L Y+V+EL+ +L I ++ E ++ +
Sbjct: 80 VNHKNIIGLLNVFTPQKSLEEFQDVYIVMELM-DANLCQVI--QMELDHERMSYLLYQML 136
Query: 486 SALSYLHDNYIVHRDIKPENLLVEMSGCHVKVLKVGDFGLAQR-----VLRPMFTVCGTP 540
+ +LH I+HRD+KP N++V+ S C +K+L DFGLA+ ++ P T
Sbjct: 137 CGIKHLHSAGIIHRDLKPSNIVVK-SDCTLKIL---DFGLARTAGTSFMMEPEVV---TR 189
Query: 541 TYVAPEILNESGYGVKIDVWAAGVILYILLCG---FP----------------------- 574
Y APE++ GY +D+W+ G I+ ++C FP
Sbjct: 190 YYRAPEVILGMGYKENVDIWSVGCIMGEMVCHKILFPGRDYIDQWNKVIEQLGTPCPAFM 249
Query: 575 ----PFVSDTNDQ---------DELFDDILSGQYGFP--SPYWDDISEEAKELISHMLES 619
P V + + ++LF D+L FP S + + +A++L+S ML
Sbjct: 250 KKLQPTVRNYVENRPKYAGYSFEKLFPDVL-----FPADSEHNKLKASQARDLLSKMLVI 304
Query: 620 NPDLRFSAEDVLDHPWL 636
+ R S ++ L HP++
Sbjct: 305 DASKRISVDEALQHPYI 321
>pdb|3VUD|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 80/315 (25%), Positives = 142/315 (45%), Gaps = 68/315 (21%)
Query: 375 LLQRYSVGQIIGDGNFAVVRQVYDKHKDMDCALKIIDK---SKLLGKKQMIENEVNILRS 431
+L+RY + IG G +V YD + + A+K + + ++ K+ E+ +++
Sbjct: 22 VLKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAY--RELVLMKC 79
Query: 432 VNHPNIIKLLDEYDTNNEL------YLVIELIKGGDLFDAISKNVKFSEEDSKFMTQSLA 485
VNH NII LL+ + L Y+V+EL+ +L I ++ E ++ +
Sbjct: 80 VNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDA-NLCQVI--QMELDHERMSYLLYQML 136
Query: 486 SALSYLHDNYIVHRDIKPENLLVEMSGCHVKVLKVGDFGLAQRVLRP--MFTVCGTPTYV 543
+ +LH I+HRD+KP N++V+ S C +K+L DFGLA+ M T Y
Sbjct: 137 CGIKHLHSAGIIHRDLKPSNIVVK-SDCTLKIL---DFGLARTAGTSFMMTPYVVTRYYR 192
Query: 544 APEILNESGYGVKIDVWAAGVILYILLCG---FPPFVSDTNDQDELFDDILSGQYGFPSP 600
APE++ GY +D+W+ G I+ ++ G FP D + ++ ++ Q G PSP
Sbjct: 193 APEVILGMGYKENVDIWSVGCIMGEMIKGGVLFP-----GTDHIDQWNKVIE-QLGTPSP 246
Query: 601 ---------------------------YWDDI------------SEEAKELISHMLESNP 621
+ D+ + +A++L+S ML +
Sbjct: 247 EFMKKLQPTVRTYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDA 306
Query: 622 DLRFSAEDVLDHPWL 636
R S ++ L HP++
Sbjct: 307 SKRISVDEALQHPYI 321
>pdb|3KVX|A Chain A, Jnk3 Bound To Aminopyrimidine Inhibitor, Sr-3562
Length = 364
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 81/309 (26%), Positives = 135/309 (43%), Gaps = 56/309 (18%)
Query: 375 LLQRYSVGQIIGDGNFAVVRQVYDKHKDMDCALKIIDK---SKLLGKKQMIENEVNILRS 431
+L+RY + IG G +V YD D + A+K + + ++ K+ E+ +++
Sbjct: 22 VLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAY--RELVLMKC 79
Query: 432 VNHPNIIKLLDEYDTNNEL------YLVIELIKGGDLFDAISKNVKFSEEDSKFMTQSLA 485
VNH NII LL+ + L YLV+EL+ +L I ++ E ++ +
Sbjct: 80 VNHKNIISLLNVFTPQKTLEEFQDVYLVMELM-DANLXQVI--QMELDHERMSYLLYQML 136
Query: 486 SALSYLHDNYIVHRDIKPENLLVEMSGCHVKVLKVGDFGLAQRVLRP--MFTVCGTPTYV 543
+ +LH I+HRD+KP N++V+ LK+ DFGLA+ M T Y
Sbjct: 137 XGIKHLHSAGIIHRDLKPSNIVVKSD----XTLKILDFGLARTAGTSFMMTPYVVTRYYR 192
Query: 544 APEILNESGYGVKIDVWAAGVIL------YILLCG-----------------FPPFVSDT 580
APE++ GY +D+W+ G I+ IL G P F+
Sbjct: 193 APEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKL 252
Query: 581 NDQDELFDDILSGQYG--FPSPYWDDI-----------SEEAKELISHMLESNPDLRFSA 627
+ + G FP + D + + +A++L+S ML +P R S
Sbjct: 253 QPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISV 312
Query: 628 EDVLDHPWL 636
+D L HP++
Sbjct: 313 DDALQHPYI 321
>pdb|2R9S|A Chain A, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
pdb|2R9S|B Chain B, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
Length = 356
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 81/309 (26%), Positives = 135/309 (43%), Gaps = 56/309 (18%)
Query: 375 LLQRYSVGQIIGDGNFAVVRQVYDKHKDMDCALKIIDK---SKLLGKKQMIENEVNILRS 431
+L+RY + IG G +V YD D + A+K + + ++ K+ E+ +++
Sbjct: 15 VLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAY--RELVLMKC 72
Query: 432 VNHPNIIKLLDEYDTNNEL------YLVIELIKGGDLFDAISKNVKFSEEDSKFMTQSLA 485
VNH NII LL+ + L YLV+EL+ +L I ++ E ++ +
Sbjct: 73 VNHKNIISLLNVFTPQKTLEEFQDVYLVMELM-DANLXQVI--QMELDHERMSYLLYQML 129
Query: 486 SALSYLHDNYIVHRDIKPENLLVEMSGCHVKVLKVGDFGLAQRVLRP--MFTVCGTPTYV 543
+ +LH I+HRD+KP N++V+ LK+ DFGLA+ M T Y
Sbjct: 130 XGIKHLHSAGIIHRDLKPSNIVVKSD----XTLKILDFGLARTAGTSFMMTPYVVTRYYR 185
Query: 544 APEILNESGYGVKIDVWAAGVIL------YILLCG-----------------FPPFVSDT 580
APE++ GY +D+W+ G I+ IL G P F+
Sbjct: 186 APEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKL 245
Query: 581 NDQDELFDDILSGQYG--FPSPYWDDI-----------SEEAKELISHMLESNPDLRFSA 627
+ + G FP + D + + +A++L+S ML +P R S
Sbjct: 246 QPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISV 305
Query: 628 EDVLDHPWL 636
+D L HP++
Sbjct: 306 DDALQHPYI 314
>pdb|3VUG|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 80/315 (25%), Positives = 142/315 (45%), Gaps = 68/315 (21%)
Query: 375 LLQRYSVGQIIGDGNFAVVRQVYDKHKDMDCALKIIDK---SKLLGKKQMIENEVNILRS 431
+L+RY + IG G +V YD + + A+K + + ++ K+ E+ +++
Sbjct: 22 VLKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAY--RELVLMKC 79
Query: 432 VNHPNIIKLLDEYDTNNEL------YLVIELIKGGDLFDAISKNVKFSEEDSKFMTQSLA 485
VNH NII LL+ + L Y+V+EL+ +L I ++ E ++ +
Sbjct: 80 VNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDA-NLSQVI--QMELDHERMSYLLYQML 136
Query: 486 SALSYLHDNYIVHRDIKPENLLVEMSGCHVKVLKVGDFGLAQRVLRP--MFTVCGTPTYV 543
+ +LH I+HRD+KP N++V+ S C +K+L DFGLA+ M T Y
Sbjct: 137 CGIKHLHSAGIIHRDLKPSNIVVK-SDCTLKIL---DFGLARTAGTSFMMTPYVVTRYYR 192
Query: 544 APEILNESGYGVKIDVWAAGVILYILLCG---FPPFVSDTNDQDELFDDILSGQYGFPSP 600
APE++ GY +D+W+ G I+ ++ G FP D + ++ ++ Q G PSP
Sbjct: 193 APEVILGMGYKENVDIWSVGCIMGEMIKGGVLFP-----GTDHIDQWNKVIE-QLGTPSP 246
Query: 601 ---------------------------YWDDI------------SEEAKELISHMLESNP 621
+ D+ + +A++L+S ML +
Sbjct: 247 EFMKKLQPTVRTYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDA 306
Query: 622 DLRFSAEDVLDHPWL 636
R S ++ L HP++
Sbjct: 307 SKRISVDEALQHPYI 321
>pdb|1H4L|A Chain A, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
pdb|1H4L|B Chain B, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
Length = 292
Score = 84.0 bits (206), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 80/294 (27%), Positives = 129/294 (43%), Gaps = 41/294 (13%)
Query: 376 LQRYSVGQIIGDGNFAVVRQVYDKHKDMDCALKII---DKSKLLGKKQMIENEVNILRSV 432
+Q+Y + IG+G + V + ++ ALK + D + G E+ +L+ +
Sbjct: 1 MQKYEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDE--GVPSSALREICLLKEL 58
Query: 433 NHPNIIKLLDEYDTNNELYLVIELIKG--GDLFDAISKNVKFSEEDSKFMTQSLASALSY 490
H NI++L D ++ +L LV E FD S N E K L L +
Sbjct: 59 KHKNIVRLHDVLHSDKKLTLVFEFCDQDLKKYFD--SCNGDLDPEIVKSFLFQLLKGLGF 116
Query: 491 LHDNYIVHRDIKPENLLVEMSGCHVKVLKVGDFGLAQRVLRPMFTVCG---TPTYVAPEI 547
H ++HRD+KP+NLL+ +G LK+ DFGLA+ P+ T Y P++
Sbjct: 117 CHSRNVLHRDLKPQNLLINRNG----ELKLADFGLARAFGIPVRCYSAEVVTLWYRPPDV 172
Query: 548 L-NESGYGVKIDVWAAGVILYILLCGFPPFV--SDTNDQDELFDDILS--GQYGFPS--- 599
L Y ID+W+AG I L P +D +DQ + +L + +PS
Sbjct: 173 LFGAKLYSTSIDMWSAGCIFAELANAARPLFPGNDVDDQLKRIFRLLGTPTEEQWPSMTK 232
Query: 600 -----PY------------WDDISEEAKELISHMLESNPDLRFSAEDVLDHPWL 636
PY ++ ++L+ ++L+ NP R SAE+ L HP+
Sbjct: 233 LPDYKPYPMYPATTSLVNVVPKLNATGRDLLQNLLKCNPVQRISAEEALQHPYF 286
>pdb|3DTC|A Chain A, Crystal Structure Of Mixed-Lineage Kinase Mlk1 Complexed
With Compound 16
Length = 271
Score = 84.0 bits (206), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 68/205 (33%), Positives = 98/205 (47%), Gaps = 14/205 (6%)
Query: 383 QIIGDGNFAVVRQVYDKHKDMDCALKIIDKSKLLGKKQMIEN---EVNILRSVNHPNIIK 439
+IIG G F V + + ++ A+K Q IEN E + + HPNII
Sbjct: 13 EIIGIGGFGKVYRAFWIGDEV--AVKAARHDPDEDISQTIENVRQEAKLFAMLKHPNIIA 70
Query: 440 LLDEYDTNNELYLVIELIKGGDLFDAISKNVKFSEEDSKFMTQSLASALSYLHDNYIV-- 497
L L LV+E +GG L +S + + Q +A ++YLHD IV
Sbjct: 71 LRGVCLKEPNLCLVMEFARGGPLNRVLSGKRIPPDILVNWAVQ-IARGMNYLHDEAIVPI 129
Query: 498 -HRDIKPENLL----VEMSGCHVKVLKVGDFGLAQRVLRPM-FTVCGTPTYVAPEILNES 551
HRD+K N+L VE K+LK+ DFGLA+ R + G ++APE++ S
Sbjct: 130 IHRDLKSSNILILQKVENGDLSNKILKITDFGLAREWHRTTKMSAAGAYAWMAPEVIRAS 189
Query: 552 GYGVKIDVWAAGVILYILLCGFPPF 576
+ DVW+ GV+L+ LL G PF
Sbjct: 190 MFSKGSDVWSYGVLLWELLTGEVPF 214
>pdb|1UKH|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
pdb|1UKI|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
Length = 369
Score = 84.0 bits (206), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 83/316 (26%), Positives = 143/316 (45%), Gaps = 70/316 (22%)
Query: 375 LLQRYSVGQIIGDGNFAVVRQVYDKHKDMDCALKIIDK---SKLLGKKQMIENEVNILRS 431
+L+RY + IG G +V YD + + A+K + + ++ K+ E+ +++
Sbjct: 22 VLKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAY--RELVLMKC 79
Query: 432 VNHPNIIKLLDEYDTNNEL------YLVIELIKGGDLFDAISKNVKFSEEDSKFMTQSLA 485
VNH NII LL+ + L Y+V+EL+ +L I ++ E ++ +
Sbjct: 80 VNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDA-NLCQVI--QMELDHERMSYLLYQML 136
Query: 486 SALSYLHDNYIVHRDIKPENLLVEMSGCHVKVLKVGDFGLAQRVLRP--MFTVCGTPTYV 543
+ +LH I+HRD+KP N++V+ S C +K+L DFGLA+ M T Y
Sbjct: 137 CGIKHLHSAGIIHRDLKPSNIVVK-SDCTLKIL---DFGLARTAGTSFMMTPYVVTRYYR 192
Query: 544 APEILNESGYGVKIDVWAAGVILYILLCG---FPPFVSDTNDQ----------------- 583
APE++ GY +D+W+ G I+ ++ G FP +D DQ
Sbjct: 193 APEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPG--TDHIDQWNKVIEQLGTPCPEFMK 250
Query: 584 ---------------------DELFDDILSGQYGFP--SPYWDDISEEAKELISHMLESN 620
++LF D+L FP S + + +A++L+S ML +
Sbjct: 251 KLQPTVRTYVENRPKYAGYSFEKLFPDVL-----FPADSEHNKLKASQARDLLSKMLVID 305
Query: 621 PDLRFSAEDVLDHPWL 636
R S ++ L HP++
Sbjct: 306 ASKRISVDEALQHPYI 321
>pdb|2X7F|A Chain A, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|B Chain B, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|C Chain C, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|D Chain D, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|E Chain E, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
Length = 326
Score = 84.0 bits (206), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 71/276 (25%), Positives = 134/276 (48%), Gaps = 29/276 (10%)
Query: 379 YSVGQIIGDGNFAVVRQVYDKHKDMDCALKIIDKSKLLGKKQMIENEVNILRSV-NHPNI 437
+ + +++G+G + V + A+K++D + +++ I+ E+N+L+ +H NI
Sbjct: 26 FELVELVGNGTYGQVYKGRHVKTGQLAAIKVMDVTG--DEEEEIKQEINMLKKYSHHRNI 83
Query: 438 IKLLDEYDTNN------ELYLVIELIKGGDLFDAISKNVK---FSEEDSKFMTQSLASAL 488
+ N +L+LV+E G + D I KN K EE ++ + + L
Sbjct: 84 ATYYGAFIKKNPPGMDDQLWLVMEFCGAGSVTDLI-KNTKGNTLKEEWIAYICREILRGL 142
Query: 489 SYLHDNYIVHRDIKPENLLVEMSGCHVKVLKVGDFGLAQRVLRPMF---TVCGTPTYVAP 545
S+LH + ++HRDIK +N+L+ VK++ DFG++ ++ R + T GTP ++AP
Sbjct: 143 SHLHQHKVIHRDIKGQNVLL-TENAEVKLV---DFGVSAQLDRTVGRRNTFIGTPYWMAP 198
Query: 546 EILN-----ESGYGVKIDVWAAGVILYILLCGFPPFVSDTNDQDELFDDILSGQYGFPSP 600
E++ ++ Y K D+W+ G+ + G PP D + LF + S
Sbjct: 199 EVIACDENPDATYDFKSDLWSLGITAIEMAEGAPPLC-DMHPMRALFLIPRNPAPRLKSK 257
Query: 601 YWDDISEEAKELISHMLESNPDLRFSAEDVLDHPWL 636
W S++ + I L N R + E ++ HP++
Sbjct: 258 KW---SKKFQSFIESCLVKNHSQRPATEQLMKHPFI 290
>pdb|3VUM|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M7 In Map
Kinase Jnk1
Length = 370
Score = 83.6 bits (205), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 81/315 (25%), Positives = 142/315 (45%), Gaps = 68/315 (21%)
Query: 375 LLQRYSVGQIIGDGNFAVVRQVYDKHKDMDCALKIIDK---SKLLGKKQMIENEVNILRS 431
+L+RY + IG G +V YD + + A+K + + ++ K+ E+ +++
Sbjct: 22 VLKRYQNLKPIGSGAQGIVVAAYDAILERNVAIKKLSRPFQNQTHAKRAY--RELVLMKV 79
Query: 432 VNHPNIIKLLDEYDTNNEL------YLVIELIKGGDLFDAISKNVKFSEEDSKFMTQSLA 485
VNH NII LL+ + L Y+V+EL+ +L I ++ E ++ +
Sbjct: 80 VNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDA-NLSQVI--QMELDHERMSYLLYQML 136
Query: 486 SALSYLHDNYIVHRDIKPENLLVEMSGCHVKVLKVGDFGLAQRVLRP--MFTVCGTPTYV 543
+ +LH I+HRD+KP N++V+ LK+ DFGLA+ M T Y
Sbjct: 137 VGIKHLHSAGIIHRDLKPSNIVVKSDAT----LKILDFGLARTAGTSFMMTPYVVTRYYR 192
Query: 544 APEILNESGYGVKIDVWAAGVILYILLCG---FPPFVSDTNDQDELFDDILSGQYGFPSP 600
APE++ GY +D+W+ GVI+ ++ G FP +D DQ ++ ++ Q G PSP
Sbjct: 193 APEVILGMGYKENVDIWSVGVIMGEMIKGGVLFPG--TDHIDQ---WNKVIE-QLGTPSP 246
Query: 601 ---------------------------YWDDI------------SEEAKELISHMLESNP 621
+ D+ + +A++L+S ML +
Sbjct: 247 EFMKKLQPTVRTYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDA 306
Query: 622 DLRFSAEDVLDHPWL 636
R S ++ L HP++
Sbjct: 307 SKRISVDEALQHPYI 321
>pdb|3ELJ|A Chain A, Jnk1 Complexed With A Bis-Anilino-Pyrrolopyrimidine
Inhibitor
Length = 369
Score = 83.6 bits (205), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 83/316 (26%), Positives = 142/316 (44%), Gaps = 70/316 (22%)
Query: 375 LLQRYSVGQIIGDGNFAVVRQVYDKHKDMDCALKIIDK---SKLLGKKQMIENEVNILRS 431
+L+RY + IG G +V YD + + A+K + + ++ K+ E+ +++
Sbjct: 27 VLKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAY--RELVLMKC 84
Query: 432 VNHPNIIKLLDEYDTNNEL------YLVIELIKGGDLFDAISKNVKFSEEDSKFMTQSLA 485
VNH NII LL+ + L Y+V+EL+ +L I ++ E ++ +
Sbjct: 85 VNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDA-NLCQVI--QMELDHERMSYLLYQML 141
Query: 486 SALSYLHDNYIVHRDIKPENLLVEMSGCHVKVLKVGDFGLAQRVLRP--MFTVCGTPTYV 543
+ +LH I+HRD+KP N++V+ S C +K+L DFGLA+ M T Y
Sbjct: 142 CGIKHLHSAGIIHRDLKPSNIVVK-SDCTLKIL---DFGLARTAGTSFMMTPYVVTRYYR 197
Query: 544 APEILNESGYGVKIDVWAAGVILYILLCG---FPPFVSDTNDQ----------------- 583
APE++ GY +D+W+ G I+ ++C FP D DQ
Sbjct: 198 APEVILGMGYKENVDLWSVGCIMGEMVCHKILFPG--RDYIDQWNKVIEQLGTPCPEFMK 255
Query: 584 ---------------------DELFDDILSGQYGFP--SPYWDDISEEAKELISHMLESN 620
++LF D+L FP S + + +A++L+S ML +
Sbjct: 256 KLQPTVRTYVENRPKYAGYSFEKLFPDVL-----FPADSEHNKLKASQARDLLSKMLVID 310
Query: 621 PDLRFSAEDVLDHPWL 636
R S ++ L HP++
Sbjct: 311 ASKRISVDEALQHPYI 326
>pdb|2XRW|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 371
Score = 83.6 bits (205), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 83/316 (26%), Positives = 143/316 (45%), Gaps = 70/316 (22%)
Query: 375 LLQRYSVGQIIGDGNFAVVRQVYDKHKDMDCALKIIDK---SKLLGKKQMIENEVNILRS 431
+L+RY + IG G +V YD + + A+K + + ++ K+ E+ +++
Sbjct: 23 VLKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAY--RELVLMKC 80
Query: 432 VNHPNIIKLLDEYDTNNEL------YLVIELIKGGDLFDAISKNVKFSEEDSKFMTQSLA 485
VNH NII LL+ + L Y+V+EL+ +L I ++ E ++ +
Sbjct: 81 VNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDA-NLCQVI--QMELDHERMSYLLYQML 137
Query: 486 SALSYLHDNYIVHRDIKPENLLVEMSGCHVKVLKVGDFGLAQRVLRP--MFTVCGTPTYV 543
+ +LH I+HRD+KP N++V+ S C +K+L DFGLA+ M T Y
Sbjct: 138 CGIKHLHSAGIIHRDLKPSNIVVK-SDCTLKIL---DFGLARTAGTSFMMTPYVVTRYYR 193
Query: 544 APEILNESGYGVKIDVWAAGVILYILLCG---FPPFVSDTNDQ----------------- 583
APE++ GY +D+W+ G I+ ++ G FP +D DQ
Sbjct: 194 APEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPG--TDHIDQWNKVIEQLGTPCPEFMK 251
Query: 584 ---------------------DELFDDILSGQYGFP--SPYWDDISEEAKELISHMLESN 620
++LF D+L FP S + + +A++L+S ML +
Sbjct: 252 KLQPTVRTYVENRPKYAGYSFEKLFPDVL-----FPADSEHNKLKASQARDLLSKMLVID 306
Query: 621 PDLRFSAEDVLDHPWL 636
R S ++ L HP++
Sbjct: 307 ASKRISVDEALQHPYI 322
>pdb|3V3V|A Chain A, Structural And Functional Analysis Of Quercetagetin, A
Natural Jnk1 Inhibitor
Length = 379
Score = 83.6 bits (205), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 83/317 (26%), Positives = 144/317 (45%), Gaps = 72/317 (22%)
Query: 375 LLQRYSVGQIIGDGNFAVVRQVYDKHKDMDCALKIIDK---SKLLGKKQMIENEVNILRS 431
+L+RY + IG G +V YD + + A+K + + ++ K+ E+ +++
Sbjct: 22 VLKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAY--RELVLMKC 79
Query: 432 VNHPNIIKLLDEYDTNNEL------YLVIELIKGGDLFDAISKNVKFSEEDSKFMTQSLA 485
VNH NII LL+ + L Y+V+EL+ +L I ++ E ++ +
Sbjct: 80 VNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDA-NLCQVI--QMELDHERMSYLLYQML 136
Query: 486 SALSYLHDNYIVHRDIKPENLLVEMSGCHVKVLKVGDFGLAQRVLRPMFTVCG---TPTY 542
+ +LH I+HRD+KP N++V+ S C +K+L DFGLA R F + T Y
Sbjct: 137 CGIKHLHSAGIIHRDLKPSNIVVK-SDCTLKIL---DFGLA-RTAGTSFMMTPEVVTRYY 191
Query: 543 VAPEILNESGYGVKIDVWAAGVILYILLCG---FPPFVSDTNDQ---------------- 583
APE++ GY +D+W+ G I+ ++ G FP +D DQ
Sbjct: 192 RAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPG--TDHIDQWNKVIEQLGTPCPEFM 249
Query: 584 ----------------------DELFDDILSGQYGFPSPYWDDI--SEEAKELISHMLES 619
++LF D+L FP+ + + +A++L+S ML
Sbjct: 250 KKLQPTVRTYVENRPKYAGYSFEKLFPDVL-----FPADSEHNALKASQARDLLSKMLVI 304
Query: 620 NPDLRFSAEDVLDHPWL 636
+ R S ++ L HP++
Sbjct: 305 DASKRISVDEALQHPYI 321
>pdb|2JKK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
pdb|2JKO|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 83.6 bits (205), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 63/216 (29%), Positives = 108/216 (50%), Gaps = 16/216 (7%)
Query: 377 QRYSVGQIIGDGNFAVVRQ-VY--DKHKDMDCALKIIDKSKLLGKKQMIENEVNILRSVN 433
+R +G+ IG+G F V Q +Y ++ M A+K ++ E +R +
Sbjct: 10 ERIELGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFD 69
Query: 434 HPNIIKLLDEYDTNNELYLVIELIKGGDLFDAISKNVKFSEEDSKFMTQS--LASALSYL 491
HP+I+KL+ T N +++++EL G+L + KFS + + + + L++AL+YL
Sbjct: 70 HPHIVKLIGVI-TENPVWIIMELCTLGELRSFLQVR-KFSLDLASLILYAYQLSTALAYL 127
Query: 492 HDNYIVHRDIKPENLLVEMSGCHVKVLKVGDFGLAQRVLRPMFTVCGTP----TYVAPEI 547
VHRDI N+LV + C +K+GDFGL++ + + ++APE
Sbjct: 128 ESKRFVHRDIAARNVLVSATDC----VKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPES 183
Query: 548 LNESGYGVKIDVWAAGVILY-ILLCGFPPFVSDTND 582
+N + DVW GV ++ IL+ G PF N+
Sbjct: 184 INFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNN 219
>pdb|2J0K|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains.
pdb|2J0K|B Chain B, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 83.2 bits (204), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 63/216 (29%), Positives = 107/216 (49%), Gaps = 16/216 (7%)
Query: 377 QRYSVGQIIGDGNFAVVRQ-VY--DKHKDMDCALKIIDKSKLLGKKQMIENEVNILRSVN 433
+R +G+ IG+G F V Q +Y ++ M A+K ++ E +R +
Sbjct: 390 ERIELGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFD 449
Query: 434 HPNIIKLLDEYDTNNELYLVIELIKGGDLFDAISKNVKFSEEDSKFM--TQSLASALSYL 491
HP+I+KL+ T N +++++EL G+L + KFS + + + L++AL+YL
Sbjct: 450 HPHIVKLIGVI-TENPVWIIMELCTLGELRSFLQVR-KFSLDLASLILYAYQLSTALAYL 507
Query: 492 HDNYIVHRDIKPENLLVEMSGCHVKVLKVGDFGLAQRVLRPMFTVCGTP----TYVAPEI 547
VHRDI N+LV + C +K+GDFGL++ + + ++APE
Sbjct: 508 ESKRFVHRDIAARNVLVSATDC----VKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPES 563
Query: 548 LNESGYGVKIDVWAAGVILY-ILLCGFPPFVSDTND 582
+N + DVW GV ++ IL+ G PF N+
Sbjct: 564 INFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNN 599
>pdb|3OMV|A Chain A, Crystal Structure Of C-Raf (Raf-1)
pdb|3OMV|B Chain B, Crystal Structure Of C-Raf (Raf-1)
Length = 307
Score = 83.2 bits (204), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 69/230 (30%), Positives = 115/230 (50%), Gaps = 30/230 (13%)
Query: 385 IGDGNFAVVRQVYDKHKDMDCALKIIDKSKLLGKK-QMIENEVNILRSVNHPNIIKLLDE 443
IG G+F V Y D A+KI+ ++ Q NEV +LR H NI+ L
Sbjct: 44 IGSGSFGTV---YKGKWHGDVAVKILKVVDPTPEQFQAFRNEVAVLRKTRHVNIL-LFMG 99
Query: 444 YDTNNELYLVIELIKGGDLFDAIS-KNVKFSEEDSKFMTQSLASALSYLHDNYIVHRDIK 502
Y T + L +V + +G L+ + + KF + + A + YLH I+HRD+K
Sbjct: 100 YMTKDNLAIVTQWCEGSSLYKHLHVQETKFQMFQLIDIARQTAQGMDYLHAKNIIHRDMK 159
Query: 503 PENLLVEMSGCHVKVLKVGDFGLA---------QRVLRPMFTVCGTPTYVAPEIL---NE 550
N+ + G V K+GDFGLA Q+V +P G+ ++APE++ +
Sbjct: 160 SNNIFLH-EGLTV---KIGDFGLATVKSRWSGSQQVEQP----TGSVLWMAPEVIRMQDN 211
Query: 551 SGYGVKIDVWAAGVILYILLCGFPPFVSDTNDQDELFDDILSGQYGFPSP 600
+ + + DV++ G++LY L+ G P+ S N++D++ + G+ G+ SP
Sbjct: 212 NPFSFQSDVYSYGIVLYELMTGELPY-SHINNRDQII--FMVGR-GYASP 257
>pdb|3PZE|A Chain A, Jnk1 In Complex With Inhibitor
Length = 358
Score = 83.2 bits (204), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 83/316 (26%), Positives = 142/316 (44%), Gaps = 70/316 (22%)
Query: 375 LLQRYSVGQIIGDGNFAVVRQVYDKHKDMDCALKIIDK---SKLLGKKQMIENEVNILRS 431
+L+RY + IG G +V YD + + A+K + + ++ K+ E+ +++
Sbjct: 16 VLKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAY--RELVLMKC 73
Query: 432 VNHPNIIKLLDEYDTNNEL------YLVIELIKGGDLFDAISKNVKFSEEDSKFMTQSLA 485
VNH NII LL+ + L Y+V+EL+ +L I ++ E ++ +
Sbjct: 74 VNHKNIIGLLNVFTPQKSLEEFQDVYIVMELM-DANLCQVI--QMELDHERMSYLLYQML 130
Query: 486 SALSYLHDNYIVHRDIKPENLLVEMSGCHVKVLKVGDFGLAQRVLRP--MFTVCGTPTYV 543
+ +LH I+HRD+KP N++V+ S C +K+L DFGLA+ M T Y
Sbjct: 131 CGIKHLHSAGIIHRDLKPSNIVVK-SDCTLKIL---DFGLARTAGTSFMMTPYVVTRYYR 186
Query: 544 APEILNESGYGVKIDVWAAGVILYILLCG---FPPFVSDTNDQ----------------- 583
APE++ GY +D+W+ G I+ ++C FP D DQ
Sbjct: 187 APEVILGMGYKENVDLWSVGCIMGEMVCHKILFPG--RDYIDQWNKVIEQLGTPCPEFMK 244
Query: 584 ---------------------DELFDDILSGQYGFP--SPYWDDISEEAKELISHMLESN 620
++LF D+L FP S + + +A++L+S ML +
Sbjct: 245 KLQPTVRTYVENRPKYAGYSFEKLFPDVL-----FPADSEHNKLKASQARDLLSKMLVID 299
Query: 621 PDLRFSAEDVLDHPWL 636
R S ++ L HP++
Sbjct: 300 ASKRISVDEALQHPYI 315
>pdb|2G01|A Chain A, Pyrazoloquinolones As Novel, Selective Jnk1 Inhibitors
pdb|2G01|B Chain B, Pyrazoloquinolones As Novel, Selective Jnk1 Inhibitors
pdb|2GMX|A Chain A, Selective Aminopyridine-Based C-Jun N-Terminal Kinase
Inhibitors With Cellular Activity
pdb|2GMX|B Chain B, Selective Aminopyridine-Based C-Jun N-Terminal Kinase
Inhibitors With Cellular Activity
pdb|2H96|A Chain A, Discovery Of Potent, Highly Selective, And Orally
Bioavailable Pyridine Carboxamide C-Jun Nh2-Terminal
Kinase Inhibitors
pdb|2H96|B Chain B, Discovery Of Potent, Highly Selective, And Orally
Bioavailable Pyridine Carboxamide C-Jun Nh2-Terminal
Kinase Inhibitors
pdb|2NO3|A Chain A, Novel 4-Anilinopyrimidines As Potent Jnk1 Inhibitors
pdb|2NO3|B Chain B, Novel 4-Anilinopyrimidines As Potent Jnk1 Inhibitors
Length = 370
Score = 83.2 bits (204), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 83/319 (26%), Positives = 144/319 (45%), Gaps = 76/319 (23%)
Query: 375 LLQRYSVGQIIGDGNFAVVRQVYDKHKDMDCALKIIDK---SKLLGKKQMIENEVNILRS 431
+L+RY + IG G +V YD + + A+K + + ++ K+ E+ +++
Sbjct: 22 VLKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAY--RELVLMKC 79
Query: 432 VNHPNIIKLLDEYDTNNEL------YLVIELIKGGDLFDAISKNVKFSEEDSKFMTQSLA 485
VNH NII LL+ + L Y+V+EL+ +L I ++ E ++ +
Sbjct: 80 VNHKNIIGLLNVFTPQKSLEEFQDVYIVMELM-DANLCQVI--QMELDHERMSYLLYQML 136
Query: 486 SALSYLHDNYIVHRDIKPENLLVEMSGCHVKVLKVGDFGLAQR-----VLRPMFTVCGTP 540
+ +LH I+HRD+KP N++V+ S C +K+L DFGLA+ ++ P T
Sbjct: 137 CGIKHLHSAGIIHRDLKPSNIVVK-SDCTLKIL---DFGLARTAGTSFMMEPEVV---TR 189
Query: 541 TYVAPEILNESGYGVKIDVWAAGVILYILLCG---FPPFVSDTNDQ-------------- 583
Y APE++ GY +D+W+ G I+ ++C FP D DQ
Sbjct: 190 YYRAPEVILGMGYKENVDLWSVGCIMGEMVCHKILFPG--RDYIDQWNKVIEQLGTPCPE 247
Query: 584 ------------------------DELFDDILSGQYGFP--SPYWDDISEEAKELISHML 617
++LF D+L FP S + + +A++L+S ML
Sbjct: 248 FMKKLQPTVRTYVENRPKYAGYSFEKLFPDVL-----FPADSEHNKLKASQARDLLSKML 302
Query: 618 ESNPDLRFSAEDVLDHPWL 636
+ R S ++ L HP++
Sbjct: 303 VIDASKRISVDEALQHPYI 321
>pdb|3VUL|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 83.2 bits (204), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 81/315 (25%), Positives = 142/315 (45%), Gaps = 68/315 (21%)
Query: 375 LLQRYSVGQIIGDGNFAVVRQVYDKHKDMDCALKIIDK---SKLLGKKQMIENEVNILRS 431
+L+RY + IG G +V YD + + A+K + + ++ K+ E+ +++
Sbjct: 22 VLKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAY--RELVLMKV 79
Query: 432 VNHPNIIKLLDEYDTNNEL------YLVIELIKGGDLFDAISKNVKFSEEDSKFMTQSLA 485
VNH NII LL+ + L Y+V+EL+ +L I ++ E ++ +
Sbjct: 80 VNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDA-NLSQVI--QMELDHERMSYLLYQML 136
Query: 486 SALSYLHDNYIVHRDIKPENLLVEMSGCHVKVLKVGDFGLAQRVLRP--MFTVCGTPTYV 543
+ +LH I+HRD+KP N++V+ LK+ DFGLA+ M T Y
Sbjct: 137 VGIKHLHSAGIIHRDLKPSNIVVKSDAT----LKILDFGLARTAGTSFMMTPYVVTRYYR 192
Query: 544 APEILNESGYGVKIDVWAAGVILYILLCG---FPPFVSDTNDQDELFDDILSGQYGFPSP 600
APE++ GY +D+W+ GVI+ ++ G FP +D DQ ++ ++ Q G PSP
Sbjct: 193 APEVILGMGYKENVDIWSVGVIMGEMIKGGVLFPG--TDHIDQ---WNKVIE-QLGTPSP 246
Query: 601 ---------------------------YWDDI------------SEEAKELISHMLESNP 621
+ D+ + +A++L+S ML +
Sbjct: 247 EFMKKLQPTVRTYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDA 306
Query: 622 DLRFSAEDVLDHPWL 636
R S ++ L HP++
Sbjct: 307 SKRISVDEALQHPYI 321
>pdb|2J0J|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 82.4 bits (202), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 63/216 (29%), Positives = 107/216 (49%), Gaps = 16/216 (7%)
Query: 377 QRYSVGQIIGDGNFAVVRQ-VY--DKHKDMDCALKIIDKSKLLGKKQMIENEVNILRSVN 433
+R +G+ IG+G F V Q +Y ++ M A+K ++ E +R +
Sbjct: 390 ERIELGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFD 449
Query: 434 HPNIIKLLDEYDTNNELYLVIELIKGGDLFDAISKNVKFSEEDSKFM--TQSLASALSYL 491
HP+I+KL+ T N +++++EL G+L + KFS + + + L++AL+YL
Sbjct: 450 HPHIVKLIGVI-TENPVWIIMELCTLGELRSFLQVR-KFSLDLASLILYAYQLSTALAYL 507
Query: 492 HDNYIVHRDIKPENLLVEMSGCHVKVLKVGDFGLAQRVLRPMFTVCGTP----TYVAPEI 547
VHRDI N+LV + C +K+GDFGL++ + + ++APE
Sbjct: 508 ESKRFVHRDIAARNVLVSSNDC----VKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPES 563
Query: 548 LNESGYGVKIDVWAAGVILY-ILLCGFPPFVSDTND 582
+N + DVW GV ++ IL+ G PF N+
Sbjct: 564 INFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNN 599
>pdb|1UNG|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNG|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNL|A Chain A, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|1UNL|B Chain B, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|3O0G|A Chain A, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
pdb|3O0G|B Chain B, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
Length = 292
Score = 82.4 bits (202), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 81/294 (27%), Positives = 131/294 (44%), Gaps = 41/294 (13%)
Query: 376 LQRYSVGQIIGDGNFAVVRQVYDKHKDMDCALKII---DKSKLLGKKQMIENEVNILRSV 432
+Q+Y + IG+G + V + ++ ALK + D + G E+ +L+ +
Sbjct: 1 MQKYEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDE--GVPSSALREICLLKEL 58
Query: 433 NHPNIIKLLDEYDTNNELYLVIELIKG--GDLFDAISKNVKFSEEDSKFMTQSLASALSY 490
H NI++L D ++ +L LV E FD S N E K L L +
Sbjct: 59 KHKNIVRLHDVLHSDKKLTLVFEFCDQDLKKYFD--SCNGDLDPEIVKSFLFQLLKGLGF 116
Query: 491 LHDNYIVHRDIKPENLLVEMSGCHVKVLKVGDFGLAQRVLRPMFTVCG---TPTYVAPEI 547
H ++HRD+KP+NLL+ +G LK+ +FGLA+ P+ T Y P++
Sbjct: 117 CHSRNVLHRDLKPQNLLINRNG----ELKLANFGLARAFGIPVRCYSAEVVTLWYRPPDV 172
Query: 548 L-NESGYGVKIDVWAAGVILYILL-CGFPPFV-SDTNDQDELFDDILS--GQYGFPS--- 599
L Y ID+W+AG I L G P F +D +DQ + +L + +PS
Sbjct: 173 LFGAKLYSTSIDMWSAGCIFAELANAGRPLFPGNDVDDQLKRIFRLLGTPTEEQWPSMTK 232
Query: 600 -----PY------------WDDISEEAKELISHMLESNPDLRFSAEDVLDHPWL 636
PY ++ ++L+ ++L+ NP R SAE+ L HP+
Sbjct: 233 LPDYKPYPMYPATTSLVNVVPKLNATGRDLLQNLLKCNPVQRISAEEALQHPYF 286
>pdb|3VUH|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M3 In Map
Kinase Jnk1
Length = 370
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 78/315 (24%), Positives = 139/315 (44%), Gaps = 68/315 (21%)
Query: 375 LLQRYSVGQIIGDGNFAVVRQVYDKHKDMDCALKIIDK---SKLLGKKQMIENEVNILRS 431
+L+RY + IG G +V YD + + A+K + + ++ K+ E+ +++
Sbjct: 22 VLKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAY--RELVLMKC 79
Query: 432 VNHPNIIKLLDEYDTNNEL------YLVIELIKGGDLFDAISKNVKFSEEDSKFMTQSLA 485
VNH NII LL+ + L Y+V+EL+ +L I ++ E ++ +
Sbjct: 80 VNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDA-NLSQVI--QMELDHERMSYLLYQML 136
Query: 486 SALSYLHDNYIVHRDIKPENLLVEMSGCHVKVLKVGDFGLAQRVLRP--MFTVCGTPTYV 543
+ +LH I+HRD+KP N++V+ LK+ DFGLA+ M T Y
Sbjct: 137 CGIKHLHSAGIIHRDLKPSNIVVKSDAT----LKILDFGLARTAGTSFMMTPYVVTRYYR 192
Query: 544 APEILNESGYGVKIDVWAAGVILYILLCG---FPPFVSDTNDQDELFDDILSGQYGFPSP 600
APE++ GY +D+W+ G I+ ++ G FP D + ++ ++ Q G PSP
Sbjct: 193 APEVILGMGYKENVDIWSVGCIMGEMIKGGVLFP-----GTDHIDQWNKVIE-QLGTPSP 246
Query: 601 ---------------------------YWDDI------------SEEAKELISHMLESNP 621
+ D+ + +A++L+S ML +
Sbjct: 247 EFMKKLQPTVRTYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDA 306
Query: 622 DLRFSAEDVLDHPWL 636
R S ++ L HP++
Sbjct: 307 SKRISVDEALQHPYI 321
>pdb|2EXE|A Chain A, Crystal Structure Of The Phosphorylated Clk3
Length = 357
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 65/238 (27%), Positives = 108/238 (45%), Gaps = 29/238 (12%)
Query: 371 IPSKLLQRYSVGQIIGDGNFAVVRQVYDKHKDM-DCALKIIDKSKLLGK-KQMIENEVNI 428
I L +RY + +G+G F V + D + ALKII + +GK ++ E+N+
Sbjct: 22 IGDWLQERYEIVGNLGEGTFGKVVECLDHARGKSQVALKII---RNVGKYREAARLEINV 78
Query: 429 LRSVNHPN------IIKLLDEYDTNNELYLVIELIKGGDLFDAISKN--VKFSEEDSKFM 480
L+ + + + + D ++ + + + EL+ G + F+ + +N + + M
Sbjct: 79 LKKIKEKDKENKFLCVLMSDWFNFHGHMCIAFELL-GKNTFEFLKENNFQPYPLPHVRHM 137
Query: 481 TQSLASALSYLHDNYIVHRDIKPENLLV----------EMSGCHVKVLK-----VGDFGL 525
L AL +LH+N + H D+KPEN+L E C K +K V DFG
Sbjct: 138 AYQLCHALRFLHENQLTHTDLKPENILFVNSEFETLYNEHKSCEEKSVKNTSIRVADFGS 197
Query: 526 AQRVLRPMFTVCGTPTYVAPEILNESGYGVKIDVWAAGVILYILLCGFPPFVSDTNDQ 583
A T+ T Y PE++ E G+ DVW+ G IL+ GF F + N +
Sbjct: 198 ATFDHEHHTTIVATRHYRPPEVILELGWAQPCDVWSIGCILFEYYRGFTLFQTHENRE 255
>pdb|2WU6|A Chain A, Crystal Structure Of The Human Clk3 In Complex With Dki
pdb|2WU7|A Chain A, Crystal Structure Of The Human Clk3 In Complex With V25
pdb|3RAW|A Chain A, Crystal Structure Of Human Cdc-Like Kinase 3 Isoform In
Complex With Leucettine L41
pdb|3RAW|B Chain B, Crystal Structure Of Human Cdc-Like Kinase 3 Isoform In
Complex With Leucettine L41
Length = 381
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 65/238 (27%), Positives = 108/238 (45%), Gaps = 29/238 (12%)
Query: 371 IPSKLLQRYSVGQIIGDGNFAVVRQVYDKHKDM-DCALKIIDKSKLLGK-KQMIENEVNI 428
I L +RY + +G+G F V + D + ALKII + +GK ++ E+N+
Sbjct: 45 IGDWLQERYEIVGNLGEGTFGKVVECLDHARGKSQVALKII---RNVGKYREAARLEINV 101
Query: 429 LRSVNHPN------IIKLLDEYDTNNELYLVIELIKGGDLFDAISKN--VKFSEEDSKFM 480
L+ + + + + D ++ + + + EL+ G + F+ + +N + + M
Sbjct: 102 LKKIKEKDKENKFLCVLMSDWFNFHGHMCIAFELL-GKNTFEFLKENNFQPYPLPHVRHM 160
Query: 481 TQSLASALSYLHDNYIVHRDIKPENLLV----------EMSGCHVKVLK-----VGDFGL 525
L AL +LH+N + H D+KPEN+L E C K +K V DFG
Sbjct: 161 AYQLCHALRFLHENQLTHTDLKPENILFVNSEFETLYNEHKSCEEKSVKNTSIRVADFGS 220
Query: 526 AQRVLRPMFTVCGTPTYVAPEILNESGYGVKIDVWAAGVILYILLCGFPPFVSDTNDQ 583
A T+ T Y PE++ E G+ DVW+ G IL+ GF F + N +
Sbjct: 221 ATFDHEHHTTIVATRHYRPPEVILELGWAQPCDVWSIGCILFEYYRGFTLFQTHENRE 278
>pdb|3VUI|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 78/315 (24%), Positives = 139/315 (44%), Gaps = 68/315 (21%)
Query: 375 LLQRYSVGQIIGDGNFAVVRQVYDKHKDMDCALKIIDK---SKLLGKKQMIENEVNILRS 431
+L+RY + IG G +V YD + + A+K + + ++ K+ E+ +++
Sbjct: 22 VLKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAY--RELVLMKV 79
Query: 432 VNHPNIIKLLDEYDTNNEL------YLVIELIKGGDLFDAISKNVKFSEEDSKFMTQSLA 485
VNH NII LL+ + L Y+V+EL+ +L I ++ E ++ +
Sbjct: 80 VNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDA-NLSQVI--QMELDHERMSYLLYQML 136
Query: 486 SALSYLHDNYIVHRDIKPENLLVEMSGCHVKVLKVGDFGLAQRVLRP--MFTVCGTPTYV 543
+ +LH I+HRD+KP N++V+ LK+ DFGLA+ M T Y
Sbjct: 137 CGIKHLHSAGIIHRDLKPSNIVVKSDAT----LKILDFGLARTAGTSFMMTPYVVTRYYR 192
Query: 544 APEILNESGYGVKIDVWAAGVILYILLCG---FPPFVSDTNDQDELFDDILSGQYGFPSP 600
APE++ GY +D+W+ G I+ ++ G FP D + ++ ++ Q G PSP
Sbjct: 193 APEVILGMGYKENVDIWSVGCIMGEMIKGGVLFP-----GTDHIDQWNKVIE-QLGTPSP 246
Query: 601 ---------------------------YWDDI------------SEEAKELISHMLESNP 621
+ D+ + +A++L+S ML +
Sbjct: 247 EFMKKLQPTVRTYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDA 306
Query: 622 DLRFSAEDVLDHPWL 636
R S ++ L HP++
Sbjct: 307 SKRISVDEALQHPYI 321
>pdb|2J0L|A Chain A, Crystal Structure Of A The Active Conformation Of The
Kinase Domain Of Focal Adhesion Kinase With A
Phosphorylated Activation Loop
Length = 276
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 63/216 (29%), Positives = 107/216 (49%), Gaps = 16/216 (7%)
Query: 377 QRYSVGQIIGDGNFAVVRQ-VY--DKHKDMDCALKIIDKSKLLGKKQMIENEVNILRSVN 433
+R +G+ IG+G F V Q +Y ++ M A+K ++ E +R +
Sbjct: 10 ERIELGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFD 69
Query: 434 HPNIIKLLDEYDTNNELYLVIELIKGGDLFDAISKNVKFSEEDSKFMTQS--LASALSYL 491
HP+I+KL+ T N +++++EL G+L + KFS + + + + L++AL+YL
Sbjct: 70 HPHIVKLIGVI-TENPVWIIMELCTLGELRSFLQVR-KFSLDLASLILYAYQLSTALAYL 127
Query: 492 HDNYIVHRDIKPENLLVEMSGCHVKVLKVGDFGLAQRVLRPMFTVCGTP----TYVAPEI 547
VHRDI N+LV + C +K+GDFGL++ + ++APE
Sbjct: 128 ESKRFVHRDIAARNVLVSSNDC----VKLGDFGLSRYMEDSTXXKASKGKLPIKWMAPES 183
Query: 548 LNESGYGVKIDVWAAGVILY-ILLCGFPPFVSDTND 582
+N + DVW GV ++ IL+ G PF N+
Sbjct: 184 INFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNN 219
>pdb|2EU9|A Chain A, Crystal Structure Of Clk3
Length = 355
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 65/238 (27%), Positives = 108/238 (45%), Gaps = 29/238 (12%)
Query: 371 IPSKLLQRYSVGQIIGDGNFAVVRQVYDKHKDM-DCALKIIDKSKLLGK-KQMIENEVNI 428
I L +RY + +G+G F V + D + ALKII + +GK ++ E+N+
Sbjct: 13 IGDWLQERYEIVGNLGEGTFGKVVECLDHARGKSQVALKII---RNVGKYREAARLEINV 69
Query: 429 LRSVNHPN------IIKLLDEYDTNNELYLVIELIKGGDLFDAISKN--VKFSEEDSKFM 480
L+ + + + + D ++ + + + EL+ G + F+ + +N + + M
Sbjct: 70 LKKIKEKDKENKFLCVLMSDWFNFHGHMCIAFELL-GKNTFEFLKENNFQPYPLPHVRHM 128
Query: 481 TQSLASALSYLHDNYIVHRDIKPENLLV----------EMSGCHVKVLK-----VGDFGL 525
L AL +LH+N + H D+KPEN+L E C K +K V DFG
Sbjct: 129 AYQLCHALRFLHENQLTHTDLKPENILFVNSEFETLYNEHKSCEEKSVKNTSIRVADFGS 188
Query: 526 AQRVLRPMFTVCGTPTYVAPEILNESGYGVKIDVWAAGVILYILLCGFPPFVSDTNDQ 583
A T+ T Y PE++ E G+ DVW+ G IL+ GF F + N +
Sbjct: 189 ATFDHEHHTTIVATRHYRPPEVILELGWAQPCDVWSIGCILFEYYRGFTLFQTHENRE 246
>pdb|2JKM|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 62/216 (28%), Positives = 108/216 (50%), Gaps = 16/216 (7%)
Query: 377 QRYSVGQIIGDGNFAVVRQ-VY--DKHKDMDCALKIIDKSKLLGKKQMIENEVNILRSVN 433
+R +G+ IG+G F V Q +Y ++ M A+K ++ E +R +
Sbjct: 10 ERIELGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFD 69
Query: 434 HPNIIKLLDEYDTNNELYLVIELIKGGDLFDAISKNVKFSEEDSKFMTQS--LASALSYL 491
HP+I+KL+ T N +++++EL G+L + K+S + + + + L++AL+YL
Sbjct: 70 HPHIVKLIGVI-TENPVWIIMELCTLGELRSFLQVR-KYSLDLASLILYAYQLSTALAYL 127
Query: 492 HDNYIVHRDIKPENLLVEMSGCHVKVLKVGDFGLAQRVLRPMFTVCGTP----TYVAPEI 547
VHRDI N+LV + C +K+GDFGL++ + + ++APE
Sbjct: 128 ESKRFVHRDIAARNVLVSSNDC----VKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPES 183
Query: 548 LNESGYGVKIDVWAAGVILY-ILLCGFPPFVSDTND 582
+N + DVW GV ++ IL+ G PF N+
Sbjct: 184 INFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNN 219
>pdb|3ANQ|A Chain A, Human Dyrk1aINHIBITOR COMPLEX
pdb|3ANQ|B Chain B, Human Dyrk1aINHIBITOR COMPLEX
pdb|3ANQ|C Chain C, Human Dyrk1aINHIBITOR COMPLEX
pdb|3ANQ|D Chain D, Human Dyrk1aINHIBITOR COMPLEX
pdb|3ANR|A Chain A, Human Dyrk1aHARMINE COMPLEX
pdb|3ANR|B Chain B, Human Dyrk1aHARMINE COMPLEX
pdb|3ANR|C Chain C, Human Dyrk1aHARMINE COMPLEX
pdb|3ANR|D Chain D, Human Dyrk1aHARMINE COMPLEX
Length = 368
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 77/276 (27%), Positives = 134/276 (48%), Gaps = 40/276 (14%)
Query: 374 KLLQRYSVGQIIGDGNFAVVRQVYDKHKDMDCALKII-DKSKLLGKKQMIENEVNILRSV 432
K + RY + +IG G+F V + YD+ + A+KII +K L + Q+ EV +L +
Sbjct: 32 KWMDRYEIDSLIGKGSFGQVVKAYDRVEQEWVAIKIIKNKKAFLNQAQI---EVRLLELM 88
Query: 433 NHPN------IIKLLDEYDTNNELYLVIELIKGGDLFDAISKNVKF---SEEDSKFMTQS 483
N + I+ L + N L LV E++ +L+D + +N F S ++ Q
Sbjct: 89 NKHDTEMKYYIVHLKRHFMFRNHLCLVFEML-SYNLYDLL-RNTNFRGVSLNLTRKFAQQ 146
Query: 484 LASALSYLH--DNYIVHRDIKPENLLVEMSGCHVK--VLKVGDFGLAQRVLRPMFTVCGT 539
+ +AL +L + I+H D+KPEN+L+ C+ K +K+ DFG + ++ + ++ +
Sbjct: 147 MCTALLFLATPELSIIHCDLKPENILL----CNPKRSAIKIVDFGSSCQLGQRIYQXIQS 202
Query: 540 PTYVAPEILNESGYGVKIDVWAAGVILYILLCGFPPFVSDTNDQDELFDDILSGQYGFPS 599
Y +PE+L Y + ID+W+ G IL + G P F S N+ D++ + + G P
Sbjct: 203 RFYRSPEVLLGMPYDLAIDMWSLGCILVEMHTGEPLF-SGANEVDQM--NKIVEVLGIPP 259
Query: 600 PYWDDISEEAKELISHMLESNPDLRFSAEDVLDHPW 635
+H+L+ P R E + D W
Sbjct: 260 --------------AHILDQAPKARKFFEKLPDGTW 281
>pdb|3VUK|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M5 In Map
Kinase Jnk1
Length = 370
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 80/315 (25%), Positives = 141/315 (44%), Gaps = 68/315 (21%)
Query: 375 LLQRYSVGQIIGDGNFAVVRQVYDKHKDMDCALKIIDK---SKLLGKKQMIENEVNILRS 431
+L+RY + IG G +V YD + + A+K + + ++ K+ E+ +++
Sbjct: 22 VLKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAY--RELVLMKV 79
Query: 432 VNHPNIIKLLDEYDTNNEL------YLVIELIKGGDLFDAISKNVKFSEEDSKFMTQSLA 485
VNH NII LL+ + L Y+V+EL+ +L I ++ E ++ +
Sbjct: 80 VNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDA-NLSQVI--QMELDHERMSYLLYQML 136
Query: 486 SALSYLHDNYIVHRDIKPENLLVEMSGCHVKVLKVGDFGLAQRVLRP--MFTVCGTPTYV 543
+ +LH I+HRD+KP N++V+ LK+ DFGLA+ M T Y
Sbjct: 137 VGIKHLHSAGIIHRDLKPSNIVVKSDAT----LKILDFGLARTAGTSFMMTPYVVTRYYR 192
Query: 544 APEILNESGYGVKIDVWAAGVILYILLCG---FPPFVSDTNDQDELFDDILSGQYGFPSP 600
APE++ GY +D+W+ G I+ ++ G FP +D DQ ++ ++ Q G PSP
Sbjct: 193 APEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPG--TDHIDQ---WNKVIE-QLGTPSP 246
Query: 601 ---------------------------YWDDI------------SEEAKELISHMLESNP 621
+ D+ + +A++L+S ML +
Sbjct: 247 EFMKKLQPTVRTYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDA 306
Query: 622 DLRFSAEDVLDHPWL 636
R S ++ L HP++
Sbjct: 307 SKRISVDEALQHPYI 321
>pdb|2Z60|A Chain A, Crystal Structure Of The T315i Mutant Of Abl Kinase Bound
With Ppy-A
pdb|3IK3|A Chain A, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
pdb|3IK3|B Chain B, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
Length = 288
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 63/253 (24%), Positives = 118/253 (46%), Gaps = 18/253 (7%)
Query: 385 IGDGNFAVVRQVYDKHKDMDCALKIIDKSKLLGKKQMIENEVNILRSVNHPNIIKLLDEY 444
+G G + V + K + A+K + + + + + E +++ + HPN+++LL
Sbjct: 21 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTM--EVEEFLKEAAVMKEIKHPNLVQLLGVC 78
Query: 445 DTNNELYLVIELIKGGDLFDAISK--NVKFSEEDSKFMTQSLASALSYLHDNYIVHRDIK 502
Y++IE + G+L D + + + S +M ++SA+ YL +HRD+
Sbjct: 79 TREPPFYIIIEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKNFIHRDLA 138
Query: 503 PENLLVEMSGCHVKVLKVGDFGLAQRVLRPMFTVCGTP----TYVAPEILNESGYGVKID 558
N LV + ++KV DFGL++ + +T + APE L + + +K D
Sbjct: 139 ARNCLVGEN----HLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSD 194
Query: 559 VWAAGVILY-ILLCGFPPFVSDTNDQDELFDDILSGQYGFPSPYWDDISEEAKELISHML 617
VWA GV+L+ I G P+ D +++ ++L Y P + E+ EL+
Sbjct: 195 VWAFGVLLWEIATYGMSPYPGI--DLSQVY-ELLEKDYRMERP--EGCPEKVYELMRACW 249
Query: 618 ESNPDLRFSAEDV 630
+ NP R S ++
Sbjct: 250 QWNPSDRPSFAEI 262
>pdb|4AZE|A Chain A, Human Dyrk1a In Complex With Leucettine L41
pdb|4AZE|B Chain B, Human Dyrk1a In Complex With Leucettine L41
pdb|4AZE|C Chain C, Human Dyrk1a In Complex With Leucettine L41
Length = 382
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 77/276 (27%), Positives = 134/276 (48%), Gaps = 40/276 (14%)
Query: 374 KLLQRYSVGQIIGDGNFAVVRQVYDKHKDMDCALKII-DKSKLLGKKQMIENEVNILRSV 432
K + RY + +IG G+F V + YD+ + A+KII +K L + Q+ EV +L +
Sbjct: 51 KWMDRYEIDSLIGKGSFGQVVKAYDRVEQEWVAIKIIKNKKAFLNQAQI---EVRLLELM 107
Query: 433 NHPN------IIKLLDEYDTNNELYLVIELIKGGDLFDAISKNVKF---SEEDSKFMTQS 483
N + I+ L + N L LV E++ +L+D + +N F S ++ Q
Sbjct: 108 NKHDTEMKYYIVHLKRHFMFRNHLCLVFEML-SYNLYDLL-RNTNFRGVSLNLTRKFAQQ 165
Query: 484 LASALSYLH--DNYIVHRDIKPENLLVEMSGCHVK--VLKVGDFGLAQRVLRPMFTVCGT 539
+ +AL +L + I+H D+KPEN+L+ C+ K +K+ DFG + ++ + ++ +
Sbjct: 166 MCTALLFLATPELSIIHCDLKPENILL----CNPKRXAIKIVDFGSSCQLGQRIYQXIQS 221
Query: 540 PTYVAPEILNESGYGVKIDVWAAGVILYILLCGFPPFVSDTNDQDELFDDILSGQYGFPS 599
Y +PE+L Y + ID+W+ G IL + G P F S N+ D++ + + G P
Sbjct: 222 RFYRSPEVLLGMPYDLAIDMWSLGCILVEMHTGEPLF-SGANEVDQM--NKIVEVLGIPP 278
Query: 600 PYWDDISEEAKELISHMLESNPDLRFSAEDVLDHPW 635
+H+L+ P R E + D W
Sbjct: 279 --------------AHILDQAPKARKFFEKLPDGTW 300
>pdb|3OY3|A Chain A, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
pdb|3OY3|B Chain B, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
Length = 284
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 63/253 (24%), Positives = 118/253 (46%), Gaps = 18/253 (7%)
Query: 385 IGDGNFAVVRQVYDKHKDMDCALKIIDKSKLLGKKQMIENEVNILRSVNHPNIIKLLDEY 444
+G G + V + K + A+K + + + + + E +++ + HPN+++LL
Sbjct: 21 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTM--EVEEFLKEAAVMKEIKHPNLVQLLGVC 78
Query: 445 DTNNELYLVIELIKGGDLFDAISK--NVKFSEEDSKFMTQSLASALSYLHDNYIVHRDIK 502
Y++IE + G+L D + + + S +M ++SA+ YL +HRD+
Sbjct: 79 TREPPFYIIIEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKNFIHRDLA 138
Query: 503 PENLLVEMSGCHVKVLKVGDFGLAQRVLRPMFTVCGTP----TYVAPEILNESGYGVKID 558
N LV + ++KV DFGL++ + +T + APE L + + +K D
Sbjct: 139 ARNCLVGEN----HLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSD 194
Query: 559 VWAAGVILY-ILLCGFPPFVSDTNDQDELFDDILSGQYGFPSPYWDDISEEAKELISHML 617
VWA GV+L+ I G P+ D +++ ++L Y P + E+ EL+
Sbjct: 195 VWAFGVLLWEIATYGMSPYPGI--DLSQVY-ELLEKDYRMERP--EGCPEKVYELMRACW 249
Query: 618 ESNPDLRFSAEDV 630
+ NP R S ++
Sbjct: 250 QWNPSDRPSFAEI 262
>pdb|4HCT|A Chain A, Crystal Structure Of Itk In Complex With Compound 52
pdb|4HCU|A Chain A, Crystal Structure Of Itk In Complext With Compound 40
pdb|4HCV|A Chain A, Crystal Structure Of Itk In Complex With Compound 53
Length = 269
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 63/217 (29%), Positives = 112/217 (51%), Gaps = 15/217 (6%)
Query: 383 QIIGDGNFAVVRQVYDKHKDMDCALKIIDKSKLLGKKQMIENEVNILRSVNHPNIIKLLD 442
Q IG G F +V Y +KD A+K I + + ++ IE E ++ ++HP +++L
Sbjct: 16 QEIGSGQFGLVHLGYWLNKD-KVAIKTI-REGAMSEEDFIE-EAEVMMKLSHPKLVQLYG 72
Query: 443 EYDTNNELYLVIELIKGGDLFDAI-SKNVKFSEEDSKFMTQSLASALSYLHDNYIVHRDI 501
+ LV E ++ G L D + ++ F+ E M + ++YL + ++HRD+
Sbjct: 73 VCLEQAPICLVFEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLEEACVIHRDL 132
Query: 502 KPENLLVEMSGCHVKVLKVGDFGLAQRVLRPMFTV-CGTP---TYVAPEILNESGYGVKI 557
N LV + +V+KV DFG+ + VL +T GT + +PE+ + S Y K
Sbjct: 133 AARNCLVGEN----QVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWASPEVFSFSRYSSKS 188
Query: 558 DVWAAGVILYILLC-GFPPFVSDTNDQDELFDDILSG 593
DVW+ GV+++ + G P+ + +N E+ +DI +G
Sbjct: 189 DVWSFGVLMWEVFSEGKIPYENRSN--SEVVEDISTG 223
>pdb|2VX3|A Chain A, Crystal Structure Of The Human Dual Specificity Tyrosine-
Phosphorylation-Regulated Kinase 1a
pdb|2VX3|B Chain B, Crystal Structure Of The Human Dual Specificity Tyrosine-
Phosphorylation-Regulated Kinase 1a
pdb|2VX3|C Chain C, Crystal Structure Of The Human Dual Specificity Tyrosine-
Phosphorylation-Regulated Kinase 1a
pdb|2VX3|D Chain D, Crystal Structure Of The Human Dual Specificity Tyrosine-
Phosphorylation-Regulated Kinase 1a
pdb|2WO6|A Chain A, Human Dual-Specificity Tyrosine-Phosphorylation-Regulated
Kinase 1a In Complex With A Consensus Substrate Peptide
pdb|2WO6|B Chain B, Human Dual-Specificity Tyrosine-Phosphorylation-Regulated
Kinase 1a In Complex With A Consensus Substrate Peptide
Length = 382
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 77/276 (27%), Positives = 134/276 (48%), Gaps = 40/276 (14%)
Query: 374 KLLQRYSVGQIIGDGNFAVVRQVYDKHKDMDCALKII-DKSKLLGKKQMIENEVNILRSV 432
K + RY + +IG G+F V + YD+ + A+KII +K L + Q+ EV +L +
Sbjct: 51 KWMDRYEIDSLIGKGSFGQVVKAYDRVEQEWVAIKIIKNKKAFLNQAQI---EVRLLELM 107
Query: 433 NHPN------IIKLLDEYDTNNELYLVIELIKGGDLFDAISKNVKF---SEEDSKFMTQS 483
N + I+ L + N L LV E++ +L+D + +N F S ++ Q
Sbjct: 108 NKHDTEMKYYIVHLKRHFMFRNHLCLVFEML-SYNLYDLL-RNTNFRGVSLNLTRKFAQQ 165
Query: 484 LASALSYLH--DNYIVHRDIKPENLLVEMSGCHVK--VLKVGDFGLAQRVLRPMFTVCGT 539
+ +AL +L + I+H D+KPEN+L+ C+ K +K+ DFG + ++ + ++ +
Sbjct: 166 MCTALLFLATPELSIIHCDLKPENILL----CNPKRSAIKIVDFGSSCQLGQRIYQXIQS 221
Query: 540 PTYVAPEILNESGYGVKIDVWAAGVILYILLCGFPPFVSDTNDQDELFDDILSGQYGFPS 599
Y +PE+L Y + ID+W+ G IL + G P F S N+ D++ + + G P
Sbjct: 222 RFYRSPEVLLGMPYDLAIDMWSLGCILVEMHTGEPLF-SGANEVDQM--NKIVEVLGIPP 278
Query: 600 PYWDDISEEAKELISHMLESNPDLRFSAEDVLDHPW 635
+H+L+ P R E + D W
Sbjct: 279 --------------AHILDQAPKARKFFEKLPDGTW 300
>pdb|1SM2|A Chain A, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SM2|B Chain B, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|A Chain A, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|B Chain B, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNX|A Chain A, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
pdb|1SNX|B Chain B, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
Length = 264
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 63/217 (29%), Positives = 112/217 (51%), Gaps = 15/217 (6%)
Query: 383 QIIGDGNFAVVRQVYDKHKDMDCALKIIDKSKLLGKKQMIENEVNILRSVNHPNIIKLLD 442
Q IG G F +V Y +KD A+K I + + ++ IE E ++ ++HP +++L
Sbjct: 11 QEIGSGQFGLVHLGYWLNKD-KVAIKTI-REGAMSEEDFIE-EAEVMMKLSHPKLVQLYG 67
Query: 443 EYDTNNELYLVIELIKGGDLFDAI-SKNVKFSEEDSKFMTQSLASALSYLHDNYIVHRDI 501
+ LV E ++ G L D + ++ F+ E M + ++YL + ++HRD+
Sbjct: 68 VCLEQAPICLVFEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLEEACVIHRDL 127
Query: 502 KPENLLVEMSGCHVKVLKVGDFGLAQRVLRPMFTV-CGTP---TYVAPEILNESGYGVKI 557
N LV + +V+KV DFG+ + VL +T GT + +PE+ + S Y K
Sbjct: 128 AARNCLVGEN----QVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWASPEVFSFSRYSSKS 183
Query: 558 DVWAAGVILYILLC-GFPPFVSDTNDQDELFDDILSG 593
DVW+ GV+++ + G P+ + +N E+ +DI +G
Sbjct: 184 DVWSFGVLMWEVFSEGKIPYENRSN--SEVVEDISTG 218
>pdb|3V5J|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5J|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5L|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|C Chain C, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|D Chain D, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V8T|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8T|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8W|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
pdb|3V8W|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
Length = 266
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 63/217 (29%), Positives = 112/217 (51%), Gaps = 15/217 (6%)
Query: 383 QIIGDGNFAVVRQVYDKHKDMDCALKIIDKSKLLGKKQMIENEVNILRSVNHPNIIKLLD 442
Q IG G F +V Y +KD A+K I + + ++ IE E ++ ++HP +++L
Sbjct: 13 QEIGSGQFGLVHLGYWLNKD-KVAIKTI-REGAMSEEDFIE-EAEVMMKLSHPKLVQLYG 69
Query: 443 EYDTNNELYLVIELIKGGDLFDAI-SKNVKFSEEDSKFMTQSLASALSYLHDNYIVHRDI 501
+ LV E ++ G L D + ++ F+ E M + ++YL + ++HRD+
Sbjct: 70 VCLEQAPICLVFEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLEEACVIHRDL 129
Query: 502 KPENLLVEMSGCHVKVLKVGDFGLAQRVLRPMFTV-CGTP---TYVAPEILNESGYGVKI 557
N LV + +V+KV DFG+ + VL +T GT + +PE+ + S Y K
Sbjct: 130 AARNCLVGEN----QVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWASPEVFSFSRYSSKS 185
Query: 558 DVWAAGVILYILLC-GFPPFVSDTNDQDELFDDILSG 593
DVW+ GV+++ + G P+ + +N E+ +DI +G
Sbjct: 186 DVWSFGVLMWEVFSEGKIPYENRSN--SEVVEDISTG 220
>pdb|3QRJ|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
pdb|3QRJ|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
Length = 277
Score = 80.5 bits (197), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 63/254 (24%), Positives = 119/254 (46%), Gaps = 20/254 (7%)
Query: 385 IGDGNFAVVRQVYDKHKDMDCALKIIDKSKLLGKKQMIENEVNILRSVNHPNIIKLLDEY 444
+G G + V + K + A+K + + + + + E +++ + HPN+++LL
Sbjct: 26 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTM--EVEEFLKEAAVMKEIKHPNLVQLLGVC 83
Query: 445 DTNNELYLVIELIKGGDLFDAISKNVKFSEEDSK---FMTQSLASALSYLHDNYIVHRDI 501
Y++IE + G+L D + + E ++ +M ++SA+ YL +HRD+
Sbjct: 84 TREPPFYIIIEFMTYGNLLDYL-RECNRQEVNAVVLLYMATQISSAMEYLEKKNFIHRDL 142
Query: 502 KPENLLVEMSGCHVKVLKVGDFGLAQRVLRPMFTVCGTP----TYVAPEILNESGYGVKI 557
N LV + ++KV DFGL++ + +T + APE L + + +K
Sbjct: 143 AARNCLVGEN----HLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKS 198
Query: 558 DVWAAGVILY-ILLCGFPPFVSDTNDQDELFDDILSGQYGFPSPYWDDISEEAKELISHM 616
DVWA GV+L+ I G P+ D +++ ++L Y P + E+ EL+
Sbjct: 199 DVWAFGVLLWEIATYGMSPYPGI--DLSQVY-ELLEKDYRMERP--EGCPEKVYELMRAC 253
Query: 617 LESNPDLRFSAEDV 630
+ NP R S ++
Sbjct: 254 WQWNPSDRPSFAEI 267
>pdb|3MIY|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MIY|B Chain B, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MJ1|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Ro5191614
pdb|3MJ2|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Bms-509744
Length = 266
Score = 80.5 bits (197), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 63/217 (29%), Positives = 112/217 (51%), Gaps = 15/217 (6%)
Query: 383 QIIGDGNFAVVRQVYDKHKDMDCALKIIDKSKLLGKKQMIENEVNILRSVNHPNIIKLLD 442
Q IG G F +V Y +KD A+K I + + ++ IE E ++ ++HP +++L
Sbjct: 13 QEIGSGQFGLVHLGYWLNKD-KVAIKTI-REGAMSEEDFIE-EAEVMMKLSHPKLVQLYG 69
Query: 443 EYDTNNELYLVIELIKGGDLFDAI-SKNVKFSEEDSKFMTQSLASALSYLHDNYIVHRDI 501
+ LV E ++ G L D + ++ F+ E M + ++YL + ++HRD+
Sbjct: 70 VCLEQAPICLVFEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLEEASVIHRDL 129
Query: 502 KPENLLVEMSGCHVKVLKVGDFGLAQRVLRPMFTV-CGTP---TYVAPEILNESGYGVKI 557
N LV + +V+KV DFG+ + VL +T GT + +PE+ + S Y K
Sbjct: 130 AARNCLVGEN----QVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWASPEVFSFSRYSSKS 185
Query: 558 DVWAAGVILYILLC-GFPPFVSDTNDQDELFDDILSG 593
DVW+ GV+++ + G P+ + +N E+ +DI +G
Sbjct: 186 DVWSFGVLMWEVFSEGKIPYENRSN--SEVVEDISTG 220
>pdb|3DK3|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK3|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 80.5 bits (197), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 63/253 (24%), Positives = 117/253 (46%), Gaps = 18/253 (7%)
Query: 385 IGDGNFAVVRQVYDKHKDMDCALKIIDKSKLLGKKQMIENEVNILRSVNHPNIIKLLDEY 444
+G G + V + K + A+K + + + + + E +++ + HPN+++LL
Sbjct: 19 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTM--EVEEFLKEAAVMKEIKHPNLVQLLGVC 76
Query: 445 DTNNELYLVIELIKGGDLFDAISK--NVKFSEEDSKFMTQSLASALSYLHDNYIVHRDIK 502
Y++ E + G+L D + + + S +M ++SA+ YL +HRD+
Sbjct: 77 TREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKNFIHRDLA 136
Query: 503 PENLLVEMSGCHVKVLKVGDFGLAQRVLRPMFTVCGTP----TYVAPEILNESGYGVKID 558
N LV + ++KV DFGL++ + FT + APE L + + +K D
Sbjct: 137 ARNCLVGEN----HLVKVADFGLSRLMTGDTFTAHAGAKFPIKWTAPESLAYNKFSIKSD 192
Query: 559 VWAAGVILY-ILLCGFPPFVSDTNDQDELFDDILSGQYGFPSPYWDDISEEAKELISHML 617
VWA GV+L+ I G P+ D +++ ++L Y P + E+ EL+
Sbjct: 193 VWAFGVLLWEIATYGMSPYPG--IDPSQVY-ELLEKDYRMERP--EGCPEKVYELMRACW 247
Query: 618 ESNPDLRFSAEDV 630
+ NP R S ++
Sbjct: 248 QWNPSDRPSFAEI 260
>pdb|3T9T|A Chain A, Crystal Structure Of Btk Mutant (F435t,K596r) Complexed
With Imidazo[1,5-A]quinoxaline
Length = 267
Score = 80.5 bits (197), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 63/217 (29%), Positives = 112/217 (51%), Gaps = 15/217 (6%)
Query: 383 QIIGDGNFAVVRQVYDKHKDMDCALKIIDKSKLLGKKQMIENEVNILRSVNHPNIIKLLD 442
Q IG G F +V Y +KD A+K I + + ++ IE E ++ ++HP +++L
Sbjct: 14 QEIGSGQFGLVHLGYWLNKD-KVAIKTI-REGAMSEEDFIE-EAEVMMKLSHPKLVQLYG 70
Query: 443 EYDTNNELYLVIELIKGGDLFDAI-SKNVKFSEEDSKFMTQSLASALSYLHDNYIVHRDI 501
+ LV E ++ G L D + ++ F+ E M + ++YL + ++HRD+
Sbjct: 71 VCLEQAPICLVTEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLEEACVIHRDL 130
Query: 502 KPENLLVEMSGCHVKVLKVGDFGLAQRVLRPMFTV-CGTP---TYVAPEILNESGYGVKI 557
N LV + +V+KV DFG+ + VL +T GT + +PE+ + S Y K
Sbjct: 131 AARNCLVGEN----QVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWASPEVFSFSRYSSKS 186
Query: 558 DVWAAGVILYILLC-GFPPFVSDTNDQDELFDDILSG 593
DVW+ GV+++ + G P+ + +N E+ +DI +G
Sbjct: 187 DVWSFGVLMWEVFSEGKIPYENRSN--SEVVEDISTG 221
>pdb|3EB0|A Chain A, Crystal Structure Of Cgd4_240 From Cryptosporidium Parvum
In Complex With Indirubin E804
pdb|3EB0|C Chain C, Crystal Structure Of Cgd4_240 From Cryptosporidium Parvum
In Complex With Indirubin E804
Length = 383
Score = 80.1 bits (196), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 84/334 (25%), Positives = 141/334 (42%), Gaps = 85/334 (25%)
Query: 377 QRYSVGQIIGDGNFAVVRQVYDKHKDMDCALKIIDKSKLLGKKQMIENEVNILRSVNHPN 436
++YS+G+ +G G+F +V +V+D ALK K+L + E++I++ ++H N
Sbjct: 7 KKYSLGKTLGTGSFGIVCEVFDIESGKRFALK-----KVLQDPRYKNRELDIMKVLDHVN 61
Query: 437 IIKLLDEYDT--------------------------------------NNELYLVIELIK 458
IIKL+D + T N L +++E +
Sbjct: 62 IIKLVDYFYTTGDEEPKPPQPPDDHNKLGGKNNGVNNHHKSVIVNPSQNKYLNVIMEYVP 121
Query: 459 GGDLFDAISKNVKFSEEDSKFMTQSLAS--------ALSYLHDNYIVHRDIKPENLLVEM 510
D + K +K + + +L S A+ ++H I HRDIKP+NLLV
Sbjct: 122 -----DTLHKVLKSFIRSGRSIPMNLISIYIYQLFRAVGFIHSLGICHRDIKPQNLLVNS 176
Query: 511 SGCHVKVLKVGDFGLAQRVL--RPMFTVCGTPTYVAPEI-LNESGYGVKIDVWAAGVILY 567
LK+ DFG A++++ P + Y APE+ L + Y ID+W+ G +
Sbjct: 177 KD---NTLKLCDFGSAKKLIPSEPSVAXICSRFYRAPELMLGATEYTPSIDLWSIGCVFG 233
Query: 568 ILLCGFPPFVSDTN-DQDELFDDILS--------------GQYGFPS---PYWDDISEE- 608
L+ G P F +T+ DQ I+ + FP+ W I E
Sbjct: 234 ELILGKPLFSGETSIDQLVRIIQIMGTPTKEQMIRMNPHYTEVRFPTLKAKDWRKILPEG 293
Query: 609 ----AKELISHMLESNPDLRFSAEDVLDHPWLER 638
A +L+ +L PDLR + + + HP+ +
Sbjct: 294 TPSLAIDLLEQILRYEPDLRINPYEAMAHPFFDH 327
>pdb|2J0M|B Chain B, Crystal Structure A Two-Chain Complex Between The Ferm And
Kinase Domains Of Focal Adhesion Kinase.
pdb|2JKQ|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 80.1 bits (196), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 61/216 (28%), Positives = 108/216 (50%), Gaps = 16/216 (7%)
Query: 377 QRYSVGQIIGDGNFAVVRQ-VY--DKHKDMDCALKIIDKSKLLGKKQMIENEVNILRSVN 433
+R +G+ IG+G F V Q +Y ++ + A+K ++ E +R +
Sbjct: 10 ERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFD 69
Query: 434 HPNIIKLLDEYDTNNELYLVIELIKGGDLFDAISKNVKFSEEDSKFMTQS--LASALSYL 491
HP+I+KL+ T N +++++EL G+L + K+S + + + + L++AL+YL
Sbjct: 70 HPHIVKLIGVI-TENPVWIIMELCTLGELRSFLQVR-KYSLDLASLILYAYQLSTALAYL 127
Query: 492 HDNYIVHRDIKPENLLVEMSGCHVKVLKVGDFGLAQRVLRPMFTVCGTP----TYVAPEI 547
VHRDI N+LV + C +K+GDFGL++ + + ++APE
Sbjct: 128 ESKRFVHRDIAARNVLVSSNDC----VKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPES 183
Query: 548 LNESGYGVKIDVWAAGVILY-ILLCGFPPFVSDTND 582
+N + DVW GV ++ IL+ G PF N+
Sbjct: 184 INFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNN 219
>pdb|3QGW|A Chain A, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGW|B Chain B, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGY|A Chain A, Crystal Structure Of Itk Inhibitor Complex
pdb|3QGY|B Chain B, Crystal Structure Of Itk Inhibitor Complex
Length = 286
Score = 80.1 bits (196), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 64/217 (29%), Positives = 111/217 (51%), Gaps = 15/217 (6%)
Query: 383 QIIGDGNFAVVRQVYDKHKDMDCALKIIDKSKLLGKKQMIENEVNILRSVNHPNIIKLLD 442
Q IG G F +V Y +KD A+K I K + + IE E ++ ++HP +++L
Sbjct: 33 QEIGSGQFGLVHLGYWLNKD-KVAIKTI-KEGSMSEDDFIE-EAEVMMKLSHPKLVQLYG 89
Query: 443 EYDTNNELYLVIELIKGGDLFDAI-SKNVKFSEEDSKFMTQSLASALSYLHDNYIVHRDI 501
+ LV E ++ G L D + ++ F+ E M + ++YL + ++HRD+
Sbjct: 90 VCLEQAPICLVFEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLEEACVIHRDL 149
Query: 502 KPENLLVEMSGCHVKVLKVGDFGLAQRVLRPMFTV-CGTP---TYVAPEILNESGYGVKI 557
N LV + +V+KV DFG+ + VL +T GT + +PE+ + S Y K
Sbjct: 150 AARNCLVGEN----QVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWASPEVFSFSRYSSKS 205
Query: 558 DVWAAGVILYILLC-GFPPFVSDTNDQDELFDDILSG 593
DVW+ GV+++ + G P+ + +N E+ +DI +G
Sbjct: 206 DVWSFGVLMWEVFSEGKIPYENRSN--SEVVEDISTG 240
>pdb|2ETM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2ETM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2IJM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
pdb|2IJM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
Length = 281
Score = 79.7 bits (195), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 61/216 (28%), Positives = 107/216 (49%), Gaps = 16/216 (7%)
Query: 377 QRYSVGQIIGDGNFAVVRQ-VY--DKHKDMDCALKIIDKSKLLGKKQMIENEVNILRSVN 433
+R +G+ IG+G F V Q +Y ++ + A+K ++ E +R +
Sbjct: 12 ERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFD 71
Query: 434 HPNIIKLLDEYDTNNELYLVIELIKGGDLFDAISKNVKFSEEDSKFM--TQSLASALSYL 491
HP+I+KL+ T N +++++EL G+L + K+S + + + L++AL+YL
Sbjct: 72 HPHIVKLIGVI-TENPVWIIMELCTLGELRSFLQVR-KYSLDLASLILYAYQLSTALAYL 129
Query: 492 HDNYIVHRDIKPENLLVEMSGCHVKVLKVGDFGLAQRVLRPMFTVCGTP----TYVAPEI 547
VHRDI N+LV + C +K+GDFGL++ + + ++APE
Sbjct: 130 ESKRFVHRDIAARNVLVSSNDC----VKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPES 185
Query: 548 LNESGYGVKIDVWAAGVILY-ILLCGFPPFVSDTND 582
+N + DVW GV ++ IL+ G PF N+
Sbjct: 186 INFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNN 221
>pdb|4EBW|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
pdb|4EBV|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
Length = 304
Score = 79.7 bits (195), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 61/216 (28%), Positives = 108/216 (50%), Gaps = 16/216 (7%)
Query: 377 QRYSVGQIIGDGNFAVVRQ-VY--DKHKDMDCALKIIDKSKLLGKKQMIENEVNILRSVN 433
+R +G+ IG+G F V Q +Y ++ + A+K ++ E +R +
Sbjct: 38 ERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFD 97
Query: 434 HPNIIKLLDEYDTNNELYLVIELIKGGDLFDAISKNVKFSEEDSKFMTQS--LASALSYL 491
HP+I+KL+ T N +++++EL G+L + K+S + + + + L++AL+YL
Sbjct: 98 HPHIVKLIGVI-TENPVWIIMELCTLGELRSFLQVR-KYSLDLASLILYAYQLSTALAYL 155
Query: 492 HDNYIVHRDIKPENLLVEMSGCHVKVLKVGDFGLAQRVLRPMFTVCGTP----TYVAPEI 547
VHRDI N+LV + C +K+GDFGL++ + + ++APE
Sbjct: 156 ESKRFVHRDIAARNVLVSSNDC----VKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPES 211
Query: 548 LNESGYGVKIDVWAAGVILY-ILLCGFPPFVSDTND 582
+N + DVW GV ++ IL+ G PF N+
Sbjct: 212 INFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNN 247
>pdb|3PPZ|A Chain A, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
pdb|3PPZ|B Chain B, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
Length = 309
Score = 79.7 bits (195), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 61/200 (30%), Positives = 100/200 (50%), Gaps = 17/200 (8%)
Query: 380 SVGQIIGDGNFAVVRQVYDKHKDMDCALKIIDKSKLLGKK-QMIENEVNILRSVNHPNII 438
++ + IG G+F V + + D A+KI+ + ++ EV I++ + HPNI+
Sbjct: 40 NIKEKIGAGSFGTVHRA--EWHGSDVAVKILMEQDFHAERVNEFLREVAIMKRLRHPNIV 97
Query: 439 KLLDEYDTNNELYLVIELIKGGDLFDAISKNVKFSEEDSK---FMTQSLASALSYLHDNY 495
+ L +V E + G L+ + K+ + D + M +A ++YLH+
Sbjct: 98 LFMGAVTQPPNLSIVTEYLSRGSLYRLLHKSGAREQLDERRRLSMAYDVAKGMNYLHNRN 157
Query: 496 --IVHRDIKPENLLVEMSGCHVKVLKVGDFGLAQRVLRPMF----TVCGTPTYVAPEILN 549
IVHRD+K NLLV+ +KV DFGL+ R+ F GTP ++APE+L
Sbjct: 158 PPIVHRDLKSPNLLVDKK----YTVKVCDFGLS-RLKASXFLXSKXAAGTPEWMAPEVLR 212
Query: 550 ESGYGVKIDVWAAGVILYIL 569
+ K DV++ GVIL+ L
Sbjct: 213 DEPSNEKSDVYSFGVILWEL 232
>pdb|1MP8|A Chain A, Crystal Structure Of Focal Adhesion Kinase (Fak)
pdb|4I4F|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With An Allosteric Binding Pyrazolobenzothiazine
Compound
Length = 281
Score = 79.7 bits (195), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 61/216 (28%), Positives = 108/216 (50%), Gaps = 16/216 (7%)
Query: 377 QRYSVGQIIGDGNFAVVRQ-VY--DKHKDMDCALKIIDKSKLLGKKQMIENEVNILRSVN 433
+R +G+ IG+G F V Q +Y ++ + A+K ++ E +R +
Sbjct: 15 ERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFD 74
Query: 434 HPNIIKLLDEYDTNNELYLVIELIKGGDLFDAISKNVKFSEEDSKFMTQS--LASALSYL 491
HP+I+KL+ T N +++++EL G+L + K+S + + + + L++AL+YL
Sbjct: 75 HPHIVKLIGVI-TENPVWIIMELCTLGELRSFLQVR-KYSLDLASLILYAYQLSTALAYL 132
Query: 492 HDNYIVHRDIKPENLLVEMSGCHVKVLKVGDFGLAQRVLRPMFTVCGTP----TYVAPEI 547
VHRDI N+LV + C +K+GDFGL++ + + ++APE
Sbjct: 133 ESKRFVHRDIAARNVLVSSNDC----VKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPES 188
Query: 548 LNESGYGVKIDVWAAGVILY-ILLCGFPPFVSDTND 582
+N + DVW GV ++ IL+ G PF N+
Sbjct: 189 INFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNN 224
>pdb|3BZ3|A Chain A, Crystal Structure Analysis Of Focal Adhesion Kinase With A
Methanesulfonamide Diaminopyrimidine Inhibitor
Length = 276
Score = 79.7 bits (195), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 61/216 (28%), Positives = 108/216 (50%), Gaps = 16/216 (7%)
Query: 377 QRYSVGQIIGDGNFAVVRQ-VY--DKHKDMDCALKIIDKSKLLGKKQMIENEVNILRSVN 433
+R +G+ IG+G F V Q +Y ++ + A+K ++ E +R +
Sbjct: 7 ERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFD 66
Query: 434 HPNIIKLLDEYDTNNELYLVIELIKGGDLFDAISKNVKFSEEDSKFMTQS--LASALSYL 491
HP+I+KL+ T N +++++EL G+L + K+S + + + + L++AL+YL
Sbjct: 67 HPHIVKLIG-VITENPVWIIMELCTLGELRSFLQVR-KYSLDLASLILYAYQLSTALAYL 124
Query: 492 HDNYIVHRDIKPENLLVEMSGCHVKVLKVGDFGLAQRVLRPMFTVCGTP----TYVAPEI 547
VHRDI N+LV + C +K+GDFGL++ + + ++APE
Sbjct: 125 ESKRFVHRDIAARNVLVSSNDC----VKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPES 180
Query: 548 LNESGYGVKIDVWAAGVILY-ILLCGFPPFVSDTND 582
+N + DVW GV ++ IL+ G PF N+
Sbjct: 181 INFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNN 216
>pdb|3PXK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
pdb|3PXK|B Chain B, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
Length = 282
Score = 79.7 bits (195), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 61/216 (28%), Positives = 107/216 (49%), Gaps = 16/216 (7%)
Query: 377 QRYSVGQIIGDGNFAVVRQ-VY--DKHKDMDCALKIIDKSKLLGKKQMIENEVNILRSVN 433
+R +G+ IG+G F V Q +Y ++ + A+K ++ E +R +
Sbjct: 13 ERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFD 72
Query: 434 HPNIIKLLDEYDTNNELYLVIELIKGGDLFDAISKNVKFSEEDSKFM--TQSLASALSYL 491
HP+I+KL+ T N +++++EL G+L + K+S + + + L++AL+YL
Sbjct: 73 HPHIVKLIGVI-TENPVWIIMELCTLGELRSFLQVR-KYSLDLASLILYAYQLSTALAYL 130
Query: 492 HDNYIVHRDIKPENLLVEMSGCHVKVLKVGDFGLAQRVLRPMFTVCGTP----TYVAPEI 547
VHRDI N+LV + C +K+GDFGL++ + + ++APE
Sbjct: 131 ESKRFVHRDIAARNVLVSSNDC----VKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPES 186
Query: 548 LNESGYGVKIDVWAAGVILY-ILLCGFPPFVSDTND 582
+N + DVW GV ++ IL+ G PF N+
Sbjct: 187 INFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNN 222
>pdb|3RP9|A Chain A, Crystal Structure Of The Apo Mapk From Toxoplasma Gondii,
25.M01780 Or Tgme49_007820
Length = 458
Score = 79.7 bits (195), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 86/296 (29%), Positives = 126/296 (42%), Gaps = 53/296 (17%)
Query: 342 SGREVPKMPTKTSVARCATATIKR-RENLNIPSKLLQRYSVGQIIGDGNFAVVRQVYDKH 400
SG + K + TA++ R + IP RY + +IG G++ V + YDK
Sbjct: 21 SGSQQEGQQRKQHHSSKPTASMPRPHSDWQIPD----RYEIRHLIGTGSYGHVCEAYDKL 76
Query: 401 KDMDCALKIIDK--SKLLGKKQMIENEVNILRSVNHPNIIKLLD-----EYDTNNELYLV 453
+ A+K I + L+ K+++ E+ IL +NH +++K+LD + + +ELY+V
Sbjct: 77 EKRVVAIKKILRVFEDLIDCKRILR-EIAILNRLNHDHVVKVLDIVIPKDVEKFDELYVV 135
Query: 454 IELIKGGDLFDAISKNVKFSEEDSKFMTQSLASALSYLHDNYIVHRDIKPENLLVEMSGC 513
+E I D V +E K + +L + Y+H I+HRD+KP N LV C
Sbjct: 136 LE-IADSDFKKLFRTPVYLTELHIKTLLYNLLVGVKYVHSAGILHRDLKPANCLVNQD-C 193
Query: 514 HVKVLKVGDFGLAQRVLRPMFTVCGTPT------------------------------YV 543
VKV DFGLA+ V P P Y
Sbjct: 194 SVKVC---DFGLARTVDYPENGNSQLPISPREDDMNLVTFPHTKNLKRQLTGHVVTRWYR 250
Query: 544 APE-ILNESGYGVKIDVWAAGVILYILLCGFPPFVSDTNDQDELFDDILSGQYGFP 598
APE IL + Y IDVW+ G I LL V+ D+ LF G FP
Sbjct: 251 APELILLQENYTEAIDVWSIGCIFAELLNMIKENVAYHADRGPLF----PGSSCFP 302
>pdb|3DK7|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK7|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 277
Score = 79.3 bits (194), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 63/253 (24%), Positives = 117/253 (46%), Gaps = 18/253 (7%)
Query: 385 IGDGNFAVVRQVYDKHKDMDCALKIIDKSKLLGKKQMIENEVNILRSVNHPNIIKLLDEY 444
+G G + V + K + A+K + + + + + E +++ + HPN+++LL
Sbjct: 19 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTM--EVEEFLKEAAVMKEIKHPNLVQLLGVC 76
Query: 445 DTNNELYLVIELIKGGDLFDAISK--NVKFSEEDSKFMTQSLASALSYLHDNYIVHRDIK 502
Y++IE + G+L D + + + S +M ++SA+ YL +HRD+
Sbjct: 77 TREPPFYIIIEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKNFIHRDLA 136
Query: 503 PENLLVEMSGCHVKVLKVGDFGLAQRVLRPMFTVCGTP----TYVAPEILNESGYGVKID 558
N LV + ++KV DFGL++ + T + APE L + + +K D
Sbjct: 137 ARNCLVGEN----HLVKVADFGLSRLMTGDTXTAHAGAKFPIKWTAPESLAYNKFSIKSD 192
Query: 559 VWAAGVILY-ILLCGFPPFVSDTNDQDELFDDILSGQYGFPSPYWDDISEEAKELISHML 617
VWA GV+L+ I G P+ D +++ ++L Y P + E+ EL+
Sbjct: 193 VWAFGVLLWEIATYGMSPYPG--IDPSQVY-ELLEKDYRMERP--EGCPEKVYELMRACW 247
Query: 618 ESNPDLRFSAEDV 630
+ NP R S ++
Sbjct: 248 QWNPSDRPSFAEI 260
>pdb|2PML|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp Analogue
pdb|2PMN|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp-Site
Inhibitor
pdb|2PMO|X Chain X, Crystal Structure Of Pfpk7 In Complex With Hymenialdisine
Length = 348
Score = 79.3 bits (194), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 69/256 (26%), Positives = 124/256 (48%), Gaps = 38/256 (14%)
Query: 411 DKSKLLGKKQMIENEVNILRSVNHPNIIK---LLDEYDTNNELYLVIE------LIKGGD 461
DK + K +NE+ I+ + + + ++ YD E+Y++ E ++K +
Sbjct: 79 DKISIKSKYDDFKNELQIITDIKNEYCLTCEGIITNYD---EVYIIYEYMENDSILKFDE 135
Query: 462 LFDAISKNVK--FSEEDSKFMTQSLASALSYLH-DNYIVHRDIKPENLLVEMSGCHVKVL 518
F + KN + K + +S+ ++ SY+H + I HRD+KP N+L++ +G +
Sbjct: 136 YFFVLDKNYTCFIPIQVIKCIIKSVLNSFSYIHNEKNICHRDVKPSNILMDKNG----RV 191
Query: 519 KVGDFGLAQRVL-RPMFTVCGTPTYVAPEIL-NESGY-GVKIDVWAAGVILYILLCGFPP 575
K+ DFG ++ ++ + + GT ++ PE NES Y G K+D+W+ G+ LY++ P
Sbjct: 192 KLSDFGESEYMVDKKIKGSRGTYEFMPPEFFSNESSYNGAKVDIWSLGICLYVMFYNVVP 251
Query: 576 FVSDTNDQDELFDDILSGQYGFP-------SPYWDD--------ISEEAKELISHMLESN 620
F S ELF++I + +P P + +S E + + L N
Sbjct: 252 F-SLKISLVELFNNIRTKNIEYPLDRNHFLYPLTNKKSTCSNNFLSNEDIDFLKLFLRKN 310
Query: 621 PDLRFSAEDVLDHPWL 636
P R ++ED L H WL
Sbjct: 311 PAERITSEDALKHEWL 326
>pdb|2QOH|A Chain A, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|2QOH|B Chain B, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|3KF4|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KF4|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
Length = 288
Score = 79.0 bits (193), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 62/253 (24%), Positives = 117/253 (46%), Gaps = 18/253 (7%)
Query: 385 IGDGNFAVVRQVYDKHKDMDCALKIIDKSKLLGKKQMIENEVNILRSVNHPNIIKLLDEY 444
+G G + V + K + A+K + + + + + E +++ + HPN+++LL
Sbjct: 21 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTM--EVEEFLKEAAVMKEIKHPNLVQLLGVC 78
Query: 445 DTNNELYLVIELIKGGDLFDAISK--NVKFSEEDSKFMTQSLASALSYLHDNYIVHRDIK 502
Y++ E + G+L D + + + S +M ++SA+ YL +HRD+
Sbjct: 79 TREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKNFIHRDLA 138
Query: 503 PENLLVEMSGCHVKVLKVGDFGLAQRVLRPMFTVCGTP----TYVAPEILNESGYGVKID 558
N LV + ++KV DFGL++ + +T + APE L + + +K D
Sbjct: 139 ARNCLVGEN----HLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSD 194
Query: 559 VWAAGVILY-ILLCGFPPFVSDTNDQDELFDDILSGQYGFPSPYWDDISEEAKELISHML 617
VWA GV+L+ I G P+ D +++ ++L Y P + E+ EL+
Sbjct: 195 VWAFGVLLWEIATYGMSPYPGI--DLSQVY-ELLEKDYRMERP--EGCPEKVYELMRACW 249
Query: 618 ESNPDLRFSAEDV 630
+ NP R S ++
Sbjct: 250 QWNPSDRPSFAEI 262
>pdb|3P86|A Chain A, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
pdb|3P86|B Chain B, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
Length = 309
Score = 79.0 bits (193), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 60/200 (30%), Positives = 101/200 (50%), Gaps = 17/200 (8%)
Query: 380 SVGQIIGDGNFAVVRQVYDKHKDMDCALKIIDKSKLLGKK-QMIENEVNILRSVNHPNII 438
++ + IG G+F V + + D A+KI+ + ++ EV I++ + HPNI+
Sbjct: 40 NIKEKIGAGSFGTVHRA--EWHGSDVAVKILMEQDFHAERVNEFLREVAIMKRLRHPNIV 97
Query: 439 KLLDEYDTNNELYLVIELIKGGDLFDAISKNVKFSEEDSK---FMTQSLASALSYLHDNY 495
+ L +V E + G L+ + K+ + D + M +A ++YLH+
Sbjct: 98 LFMGAVTQPPNLSIVTEYLSRGSLYRLLHKSGAREQLDERRRLSMAYDVAKGMNYLHNRN 157
Query: 496 --IVHRDIKPENLLVEMSGCHVKVLKVGDFGLAQRVLRPMF----TVCGTPTYVAPEILN 549
IVHR++K NLLV+ +KV DFGL+ R+ F + GTP ++APE+L
Sbjct: 158 PPIVHRNLKSPNLLVDKK----YTVKVCDFGLS-RLKASTFLSSKSAAGTPEWMAPEVLR 212
Query: 550 ESGYGVKIDVWAAGVILYIL 569
+ K DV++ GVIL+ L
Sbjct: 213 DEPSNEKSDVYSFGVILWEL 232
>pdb|1FPU|A Chain A, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1FPU|B Chain B, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1IEP|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1IEP|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1M52|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1M52|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1OPJ|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPJ|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|2HZN|A Chain A, Abl Kinase Domain In Complex With Nvp-Afg210
pdb|3K5V|A Chain A, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3K5V|B Chain B, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3MS9|A Chain A, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MS9|B Chain B, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MSS|A Chain A, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|B Chain B, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|C Chain C, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|D Chain D, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
Length = 293
Score = 79.0 bits (193), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 62/253 (24%), Positives = 117/253 (46%), Gaps = 18/253 (7%)
Query: 385 IGDGNFAVVRQVYDKHKDMDCALKIIDKSKLLGKKQMIENEVNILRSVNHPNIIKLLDEY 444
+G G + V + K + A+K + + + + + E +++ + HPN+++LL
Sbjct: 26 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTM--EVEEFLKEAAVMKEIKHPNLVQLLGVC 83
Query: 445 DTNNELYLVIELIKGGDLFDAISK--NVKFSEEDSKFMTQSLASALSYLHDNYIVHRDIK 502
Y++ E + G+L D + + + S +M ++SA+ YL +HRD+
Sbjct: 84 TREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKNFIHRDLA 143
Query: 503 PENLLVEMSGCHVKVLKVGDFGLAQRVLRPMFTVCGTP----TYVAPEILNESGYGVKID 558
N LV + ++KV DFGL++ + +T + APE L + + +K D
Sbjct: 144 ARNCLVGEN----HLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSD 199
Query: 559 VWAAGVILY-ILLCGFPPFVSDTNDQDELFDDILSGQYGFPSPYWDDISEEAKELISHML 617
VWA GV+L+ I G P+ D +++ ++L Y P + E+ EL+
Sbjct: 200 VWAFGVLLWEIATYGMSPYPG--IDLSQVY-ELLEKDYRMERP--EGCPEKVYELMRACW 254
Query: 618 ESNPDLRFSAEDV 630
+ NP R S ++
Sbjct: 255 QWNPSDRPSFAEI 267
>pdb|3OXZ|A Chain A, Crystal Structure Of Abl Kinase Domain Bound With A
Dfg-Out Inhibitor Ap24534
Length = 284
Score = 79.0 bits (193), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 62/253 (24%), Positives = 117/253 (46%), Gaps = 18/253 (7%)
Query: 385 IGDGNFAVVRQVYDKHKDMDCALKIIDKSKLLGKKQMIENEVNILRSVNHPNIIKLLDEY 444
+G G + V + K + A+K + + + + + E +++ + HPN+++LL
Sbjct: 21 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTM--EVEEFLKEAAVMKEIKHPNLVQLLGVC 78
Query: 445 DTNNELYLVIELIKGGDLFDAISK--NVKFSEEDSKFMTQSLASALSYLHDNYIVHRDIK 502
Y++ E + G+L D + + + S +M ++SA+ YL +HRD+
Sbjct: 79 TREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKNFIHRDLA 138
Query: 503 PENLLVEMSGCHVKVLKVGDFGLAQRVLRPMFTVCGTP----TYVAPEILNESGYGVKID 558
N LV + ++KV DFGL++ + +T + APE L + + +K D
Sbjct: 139 ARNCLVGEN----HLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSD 194
Query: 559 VWAAGVILY-ILLCGFPPFVSDTNDQDELFDDILSGQYGFPSPYWDDISEEAKELISHML 617
VWA GV+L+ I G P+ D +++ ++L Y P + E+ EL+
Sbjct: 195 VWAFGVLLWEIATYGMSPYPGI--DLSQVY-ELLEKDYRMERP--EGCPEKVYELMRACW 249
Query: 618 ESNPDLRFSAEDV 630
+ NP R S ++
Sbjct: 250 QWNPSDRPSFAEI 262
>pdb|3QRI|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRI|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRK|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dp- 987
Length = 277
Score = 78.6 bits (192), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 62/254 (24%), Positives = 118/254 (46%), Gaps = 20/254 (7%)
Query: 385 IGDGNFAVVRQVYDKHKDMDCALKIIDKSKLLGKKQMIENEVNILRSVNHPNIIKLLDEY 444
+G G + V + K + A+K + + + + + E +++ + HPN+++LL
Sbjct: 26 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTM--EVEEFLKEAAVMKEIKHPNLVQLLGVC 83
Query: 445 DTNNELYLVIELIKGGDLFDAISKNVKFSEEDSK---FMTQSLASALSYLHDNYIVHRDI 501
Y++ E + G+L D + + E ++ +M ++SA+ YL +HRD+
Sbjct: 84 TREPPFYIITEFMTYGNLLDYL-RECNRQEVNAVVLLYMATQISSAMEYLEKKNFIHRDL 142
Query: 502 KPENLLVEMSGCHVKVLKVGDFGLAQRVLRPMFTVCGTP----TYVAPEILNESGYGVKI 557
N LV + ++KV DFGL++ + +T + APE L + + +K
Sbjct: 143 AARNCLVGEN----HLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKS 198
Query: 558 DVWAAGVILY-ILLCGFPPFVSDTNDQDELFDDILSGQYGFPSPYWDDISEEAKELISHM 616
DVWA GV+L+ I G P+ D +++ ++L Y P + E+ EL+
Sbjct: 199 DVWAFGVLLWEIATYGMSPYPGI--DLSQVY-ELLEKDYRMERP--EGCPEKVYELMRAC 253
Query: 617 LESNPDLRFSAEDV 630
+ NP R S ++
Sbjct: 254 WQWNPSDRPSFAEI 267
>pdb|3N9X|A Chain A, Crystal Structure Of Map Kinase From Plasmodium Berghei,
Pb000659.00.0
pdb|3N9X|B Chain B, Crystal Structure Of Map Kinase From Plasmodium Berghei,
Pb000659.00.0
Length = 432
Score = 78.6 bits (192), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 91/364 (25%), Positives = 149/364 (40%), Gaps = 110/364 (30%)
Query: 367 ENLNIPSKLLQRYSVGQIIGDGNFAVVRQVYDKHKDMDCALKIIDK--SKLLGKKQMIEN 424
+N+++P Y + +IG G++ V YDK+ + + A+K +++ L+ K+++
Sbjct: 20 KNVHVPD----NYIIKHLIGRGSYGYVYLAYDKNTEKNVAIKKVNRMFEDLIDCKRILR- 74
Query: 425 EVNILRSVNHPNIIKLLD--------EYDTNNELYLVIELIKGGDLFDAISKNVKFSEED 476
E+ IL + II+L D ++D ELY+V+E I DL + +EE
Sbjct: 75 EITILNRLKSDYIIRLYDLIIPDDLLKFD---ELYIVLE-IADSDLKKLFKTPIFLTEEH 130
Query: 477 SKFMTQSLASALSYLHDNYIVHRDIKPENLLVEMSGCHVKVLKVGDFGLAQRV------- 529
K + +L +++H++ I+HRD+KP N L+ C VKV DFGLA+ +
Sbjct: 131 IKTILYNLLLGENFIHESGIIHRDLKPANCLLN-QDCSVKVC---DFGLARTINSEKDTN 186
Query: 530 -----------------LRPMFTV-CGTPTYVAPE-ILNESGYGVKIDVWAAGVILYILL 570
L+ T T Y APE IL + Y ID+W+ G I LL
Sbjct: 187 IVNDLEENEEPGPHNKNLKKQLTSHVVTRWYRAPELILLQENYTKSIDIWSTGCIFAELL 246
Query: 571 CGFPPFVSDTNDQDELFDDILSGQYGFP---------------------------SPYWD 603
++D ++ LF G FP +P D
Sbjct: 247 NMLQSHINDPTNRFPLF----PGSSCFPLSPDRNSKKVHEKSNRDQLNIIFNIIGTPTED 302
Query: 604 D------------------------------ISEEAKELISHMLESNPDLRFSAEDVLDH 633
D IS++ L+ ML+ NP+ R + + LDH
Sbjct: 303 DLKNINKPEVIKYIKLFPHRKPINLKQKYPSISDDGINLLESMLKFNPNKRITIDQALDH 362
Query: 634 PWLE 637
P+L+
Sbjct: 363 PYLK 366
>pdb|2HZI|A Chain A, Abl Kinase Domain In Complex With Pd180970
pdb|2HZI|B Chain B, Abl Kinase Domain In Complex With Pd180970
pdb|3CS9|A Chain A, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|B Chain B, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|C Chain C, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|D Chain D, Human Abl Kinase In Complex With Nilotinib
Length = 277
Score = 78.6 bits (192), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 62/254 (24%), Positives = 118/254 (46%), Gaps = 20/254 (7%)
Query: 385 IGDGNFAVVRQVYDKHKDMDCALKIIDKSKLLGKKQMIENEVNILRSVNHPNIIKLLDEY 444
+G G + V + K + A+K + + + + + E +++ + HPN+++LL
Sbjct: 25 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTM--EVEEFLKEAAVMKEIKHPNLVQLLGVC 82
Query: 445 DTNNELYLVIELIKGGDLFDAISKNVKFSEEDSK---FMTQSLASALSYLHDNYIVHRDI 501
Y++ E + G+L D + + E ++ +M ++SA+ YL +HRD+
Sbjct: 83 TREPPFYIITEFMTYGNLLDYL-RECNRQEVNAVVLLYMATQISSAMEYLEKKNFIHRDL 141
Query: 502 KPENLLVEMSGCHVKVLKVGDFGLAQRVLRPMFTVCGTP----TYVAPEILNESGYGVKI 557
N LV + ++KV DFGL++ + +T + APE L + + +K
Sbjct: 142 AARNCLVGEN----HLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKS 197
Query: 558 DVWAAGVILY-ILLCGFPPFVSDTNDQDELFDDILSGQYGFPSPYWDDISEEAKELISHM 616
DVWA GV+L+ I G P+ D +++ ++L Y P + E+ EL+
Sbjct: 198 DVWAFGVLLWEIATYGMSPYPGI--DLSQVY-ELLEKDYRMERP--EGCPEKVYELMRAC 252
Query: 617 LESNPDLRFSAEDV 630
+ NP R S ++
Sbjct: 253 WQWNPSDRPSFAEI 266
>pdb|2HYY|A Chain A, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|B Chain B, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|C Chain C, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|D Chain D, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HZ4|A Chain A, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|B Chain B, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|C Chain C, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
Length = 273
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 62/254 (24%), Positives = 118/254 (46%), Gaps = 20/254 (7%)
Query: 385 IGDGNFAVVRQVYDKHKDMDCALKIIDKSKLLGKKQMIENEVNILRSVNHPNIIKLLDEY 444
+G G + V + K + A+K + + + + + E +++ + HPN+++LL
Sbjct: 21 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTM--EVEEFLKEAAVMKEIKHPNLVQLLGVC 78
Query: 445 DTNNELYLVIELIKGGDLFDAISKNVKFSEEDSK---FMTQSLASALSYLHDNYIVHRDI 501
Y++ E + G+L D + + E ++ +M ++SA+ YL +HRD+
Sbjct: 79 TREPPFYIITEFMTYGNLLDYL-RECNRQEVNAVVLLYMATQISSAMEYLEKKNFIHRDL 137
Query: 502 KPENLLVEMSGCHVKVLKVGDFGLAQRVLRPMFTVCGTP----TYVAPEILNESGYGVKI 557
N LV + ++KV DFGL++ + +T + APE L + + +K
Sbjct: 138 AARNCLVGEN----HLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKS 193
Query: 558 DVWAAGVILY-ILLCGFPPFVSDTNDQDELFDDILSGQYGFPSPYWDDISEEAKELISHM 616
DVWA GV+L+ I G P+ D +++ ++L Y P + E+ EL+
Sbjct: 194 DVWAFGVLLWEIATYGMSPYPGI--DLSQVY-ELLEKDYRMERP--EGCPEKVYELMRAC 248
Query: 617 LESNPDLRFSAEDV 630
+ NP R S ++
Sbjct: 249 WQWNPSDRPSFAEI 262
>pdb|3DK6|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK6|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 63/253 (24%), Positives = 116/253 (45%), Gaps = 18/253 (7%)
Query: 385 IGDGNFAVVRQVYDKHKDMDCALKIIDKSKLLGKKQMIENEVNILRSVNHPNIIKLLDEY 444
+G G F V + K + A+K + + + + + E +++ + HPN+++LL
Sbjct: 19 LGGGQFGEVYEGVWKKYSLTVAVKTLKEDTM--EVEEFLKEAAVMKEIKHPNLVQLLGVC 76
Query: 445 DTNNELYLVIELIKGGDLFDAISK--NVKFSEEDSKFMTQSLASALSYLHDNYIVHRDIK 502
Y++ E + G+L D + + + S +M ++SA+ YL +HRD+
Sbjct: 77 TREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKNFIHRDLA 136
Query: 503 PENLLVEMSGCHVKVLKVGDFGLAQRVLRPMFTVCGTP----TYVAPEILNESGYGVKID 558
N LV + ++KV DFGL++ + T + APE L + + +K D
Sbjct: 137 ARNCLVGEN----HLVKVADFGLSRLMTGDTXTAHAGAKFPIKWTAPESLAYNKFSIKSD 192
Query: 559 VWAAGVILY-ILLCGFPPFVSDTNDQDELFDDILSGQYGFPSPYWDDISEEAKELISHML 617
VWA GV+L+ I G P+ D +++ ++L Y P + E+ EL+
Sbjct: 193 VWAFGVLLWEIATYGMSPYPG--IDPSQVY-ELLEKDYRMERP--EGCPEKVYELMRACW 247
Query: 618 ESNPDLRFSAEDV 630
+ NP R S ++
Sbjct: 248 QWNPSDRPSFAEI 260
>pdb|2HZ0|A Chain A, Abl Kinase Domain In Complex With Nvp-Aeg082
pdb|2HZ0|B Chain B, Abl Kinase Domain In Complex With Nvp-Aeg082
Length = 270
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 62/254 (24%), Positives = 118/254 (46%), Gaps = 20/254 (7%)
Query: 385 IGDGNFAVVRQVYDKHKDMDCALKIIDKSKLLGKKQMIENEVNILRSVNHPNIIKLLDEY 444
+G G + V + K + A+K + + + + + E +++ + HPN+++LL
Sbjct: 21 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTM--EVEEFLKEAAVMKEIKHPNLVQLLGVC 78
Query: 445 DTNNELYLVIELIKGGDLFDAISKNVKFSEEDSK---FMTQSLASALSYLHDNYIVHRDI 501
Y++ E + G+L D + + E ++ +M ++SA+ YL +HRD+
Sbjct: 79 TREPPFYIITEFMTYGNLLDYL-RECNRQEVNAVVLLYMATQISSAMEYLEKKNFIHRDL 137
Query: 502 KPENLLVEMSGCHVKVLKVGDFGLAQRVLRPMFTVCGTP----TYVAPEILNESGYGVKI 557
N LV + ++KV DFGL++ + +T + APE L + + +K
Sbjct: 138 AARNCLVGEN----HLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKS 193
Query: 558 DVWAAGVILY-ILLCGFPPFVSDTNDQDELFDDILSGQYGFPSPYWDDISEEAKELISHM 616
DVWA GV+L+ I G P+ D +++ ++L Y P + E+ EL+
Sbjct: 194 DVWAFGVLLWEIATYGMSPYPGI--DLSQVY-ELLEKDYRMERP--EGCPEKVYELMRAC 248
Query: 617 LESNPDLRFSAEDV 630
+ NP R S ++
Sbjct: 249 WQWNPSDRPSFAEI 262
>pdb|2F4J|A Chain A, Structure Of The Kinase Domain Of An Imatinib-Resistant
Abl Mutant In Complex With The Aurora Kinase Inhibitor
Vx-680
Length = 287
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 62/254 (24%), Positives = 118/254 (46%), Gaps = 20/254 (7%)
Query: 385 IGDGNFAVVRQVYDKHKDMDCALKIIDKSKLLGKKQMIENEVNILRSVNHPNIIKLLDEY 444
+G G + V + K + A+K + + + + + E +++ + HPN+++LL
Sbjct: 22 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTM--EVEEFLKEAAVMKEIKHPNLVQLLGVC 79
Query: 445 DTNNELYLVIELIKGGDLFDAISKNVKFSEEDSK---FMTQSLASALSYLHDNYIVHRDI 501
Y++ E + G+L D + + E ++ +M ++SA+ YL +HRD+
Sbjct: 80 TREPPFYIITEFMTYGNLLDYL-RECNRQEVNAVVLLYMATQISSAMEYLEKKNFIHRDL 138
Query: 502 KPENLLVEMSGCHVKVLKVGDFGLAQRVLRPMFTVCGTP----TYVAPEILNESGYGVKI 557
N LV + ++KV DFGL++ + +T + APE L + + +K
Sbjct: 139 AARNCLVGEN----HLVKVADFGLSRLMTGDTYTAPAGAKFPIKWTAPESLAYNKFSIKS 194
Query: 558 DVWAAGVILY-ILLCGFPPFVSDTNDQDELFDDILSGQYGFPSPYWDDISEEAKELISHM 616
DVWA GV+L+ I G P+ D +++ ++L Y P + E+ EL+
Sbjct: 195 DVWAFGVLLWEIATYGMSPYPGI--DLSQVY-ELLEKDYRMERP--EGCPEKVYELMRAC 249
Query: 617 LESNPDLRFSAEDV 630
+ NP R S ++
Sbjct: 250 WQWNPSDRPSFAEI 263
>pdb|2V7A|A Chain A, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
pdb|2V7A|B Chain B, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
Length = 286
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 63/254 (24%), Positives = 118/254 (46%), Gaps = 20/254 (7%)
Query: 385 IGDGNFAVVRQVYDKHKDMDCALKIIDKSKLLGKKQMIENEVNILRSVNHPNIIKLLDEY 444
+G G + V + K + A+K + + + + + E +++ + HPN+++LL
Sbjct: 22 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTM--EVEEFLKEAAVMKEIKHPNLVQLLGVC 79
Query: 445 DTNNELYLVIELIKGGDLFDAISKNVKFSEEDSK---FMTQSLASALSYLHDNYIVHRDI 501
Y++IE + G+L D + + E ++ +M ++SA+ YL +HRD+
Sbjct: 80 TREPPFYIIIEFMTYGNLLDYL-RECNRQEVNAVVLLYMATQISSAMEYLEKKNFIHRDL 138
Query: 502 KPENLLVEMSGCHVKVLKVGDFGLAQRVLRPMFTVCGTP----TYVAPEILNESGYGVKI 557
N LV + ++KV DFGL++ + T + APE L + + +K
Sbjct: 139 AARNCLVGEN----HLVKVADFGLSRLMTGDTXTAHAGAKFPIKWTAPESLAYNKFSIKS 194
Query: 558 DVWAAGVILY-ILLCGFPPFVSDTNDQDELFDDILSGQYGFPSPYWDDISEEAKELISHM 616
DVWA GV+L+ I G P+ D +++ ++L Y P + E+ EL+
Sbjct: 195 DVWAFGVLLWEIATYGMSPYPGI--DLSQVY-ELLEKDYRMERP--EGCPEKVYELMRAC 249
Query: 617 LESNPDLRFSAEDV 630
+ NP R S ++
Sbjct: 250 WQWNPSDRPSFAEI 263
>pdb|2G2F|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2F|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
Length = 287
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 62/254 (24%), Positives = 118/254 (46%), Gaps = 20/254 (7%)
Query: 385 IGDGNFAVVRQVYDKHKDMDCALKIIDKSKLLGKKQMIENEVNILRSVNHPNIIKLLDEY 444
+G G + V + K + A+K + + + + + E +++ + HPN+++LL
Sbjct: 23 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTM--EVEEFLKEAAVMKEIKHPNLVQLLGVC 80
Query: 445 DTNNELYLVIELIKGGDLFDAISKNVKFSEEDSK---FMTQSLASALSYLHDNYIVHRDI 501
Y++ E + G+L D + + E ++ +M ++SA+ YL +HRD+
Sbjct: 81 TREPPFYIITEFMTYGNLLDYL-RECNRQEVNAVVLLYMATQISSAMEYLEKKNFIHRDL 139
Query: 502 KPENLLVEMSGCHVKVLKVGDFGLAQRVLRPMFTVCGTP----TYVAPEILNESGYGVKI 557
N LV + ++KV DFGL++ + +T + APE L + + +K
Sbjct: 140 AARNCLVGEN----HLVKVADFGLSRLMTGDTYTAPAGAKFPIKWTAPESLAYNKFSIKS 195
Query: 558 DVWAAGVILY-ILLCGFPPFVSDTNDQDELFDDILSGQYGFPSPYWDDISEEAKELISHM 616
DVWA GV+L+ I G P+ D +++ ++L Y P + E+ EL+
Sbjct: 196 DVWAFGVLLWEIATYGMSPYPGI--DLSQVY-ELLEKDYRMERP--EGCPEKVYELMRAC 250
Query: 617 LESNPDLRFSAEDV 630
+ NP R S ++
Sbjct: 251 WQWNPSDRPSFAEI 264
>pdb|2E2B|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
pdb|2E2B|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
Length = 293
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 62/254 (24%), Positives = 118/254 (46%), Gaps = 20/254 (7%)
Query: 385 IGDGNFAVVRQVYDKHKDMDCALKIIDKSKLLGKKQMIENEVNILRSVNHPNIIKLLDEY 444
+G G + V + K + A+K + + + + + E +++ + HPN+++LL
Sbjct: 26 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTM--EVEEFLKEAAVMKEIKHPNLVQLLGVC 83
Query: 445 DTNNELYLVIELIKGGDLFDAISKNVKFSEEDSK---FMTQSLASALSYLHDNYIVHRDI 501
Y++ E + G+L D + + E ++ +M ++SA+ YL +HRD+
Sbjct: 84 TREPPFYIITEFMTYGNLLDYL-RECNRQEVNAVVLLYMATQISSAMEYLEKKNFIHRDL 142
Query: 502 KPENLLVEMSGCHVKVLKVGDFGLAQRVLRPMFTVCGTP----TYVAPEILNESGYGVKI 557
N LV + ++KV DFGL++ + +T + APE L + + +K
Sbjct: 143 AARNCLVGEN----HLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKS 198
Query: 558 DVWAAGVILY-ILLCGFPPFVSDTNDQDELFDDILSGQYGFPSPYWDDISEEAKELISHM 616
DVWA GV+L+ I G P+ D +++ ++L Y P + E+ EL+
Sbjct: 199 DVWAFGVLLWEIATYGMSPYPGI--DLSQVY-ELLEKDYRMERP--EGCPEKVYELMRAC 253
Query: 617 LESNPDLRFSAEDV 630
+ NP R S ++
Sbjct: 254 WQWNPSDRPSFAEI 267
>pdb|2G1T|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|C Chain C, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|D Chain D, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|3UE4|A Chain A, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
pdb|3UE4|B Chain B, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
Length = 287
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 62/254 (24%), Positives = 118/254 (46%), Gaps = 20/254 (7%)
Query: 385 IGDGNFAVVRQVYDKHKDMDCALKIIDKSKLLGKKQMIENEVNILRSVNHPNIIKLLDEY 444
+G G + V + K + A+K + + + + + E +++ + HPN+++LL
Sbjct: 23 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTM--EVEEFLKEAAVMKEIKHPNLVQLLGVC 80
Query: 445 DTNNELYLVIELIKGGDLFDAISKNVKFSEEDSK---FMTQSLASALSYLHDNYIVHRDI 501
Y++ E + G+L D + + E ++ +M ++SA+ YL +HRD+
Sbjct: 81 TREPPFYIITEFMTYGNLLDYL-RECNRQEVNAVVLLYMATQISSAMEYLEKKNFIHRDL 139
Query: 502 KPENLLVEMSGCHVKVLKVGDFGLAQRVLRPMFTVCGTP----TYVAPEILNESGYGVKI 557
N LV + ++KV DFGL++ + +T + APE L + + +K
Sbjct: 140 AARNCLVGEN----HLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKS 195
Query: 558 DVWAAGVILY-ILLCGFPPFVSDTNDQDELFDDILSGQYGFPSPYWDDISEEAKELISHM 616
DVWA GV+L+ I G P+ D +++ ++L Y P + E+ EL+
Sbjct: 196 DVWAFGVLLWEIATYGMSPYPGI--DLSQVY-ELLEKDYRMERP--EGCPEKVYELMRAC 250
Query: 617 LESNPDLRFSAEDV 630
+ NP R S ++
Sbjct: 251 WQWNPSDRPSFAEI 264
>pdb|3PYY|A Chain A, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
pdb|3PYY|B Chain B, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
Length = 298
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 62/254 (24%), Positives = 118/254 (46%), Gaps = 20/254 (7%)
Query: 385 IGDGNFAVVRQVYDKHKDMDCALKIIDKSKLLGKKQMIENEVNILRSVNHPNIIKLLDEY 444
+G G + V + K + A+K + + + + + E +++ + HPN+++LL
Sbjct: 34 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTM--EVEEFLKEAAVMKEIKHPNLVQLLGVC 91
Query: 445 DTNNELYLVIELIKGGDLFDAISKNVKFSEEDSK---FMTQSLASALSYLHDNYIVHRDI 501
Y++ E + G+L D + + E ++ +M ++SA+ YL +HRD+
Sbjct: 92 TREPPFYIITEFMTYGNLLDYL-RECNRQEVNAVVLLYMATQISSAMEYLEKKNFIHRDL 150
Query: 502 KPENLLVEMSGCHVKVLKVGDFGLAQRVLRPMFTVCGTP----TYVAPEILNESGYGVKI 557
N LV + ++KV DFGL++ + +T + APE L + + +K
Sbjct: 151 AARNCLVGEN----HLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKS 206
Query: 558 DVWAAGVILY-ILLCGFPPFVSDTNDQDELFDDILSGQYGFPSPYWDDISEEAKELISHM 616
DVWA GV+L+ I G P+ D +++ ++L Y P + E+ EL+
Sbjct: 207 DVWAFGVLLWEIATYGMSPYPGI--DLSQVY-ELLEKDYRMERP--EGCPEKVYELMRAC 261
Query: 617 LESNPDLRFSAEDV 630
+ NP R S ++
Sbjct: 262 WQWNPSDRPSFAEI 275
>pdb|2HIW|A Chain A, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
pdb|2HIW|B Chain B, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
Length = 287
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 62/254 (24%), Positives = 118/254 (46%), Gaps = 20/254 (7%)
Query: 385 IGDGNFAVVRQVYDKHKDMDCALKIIDKSKLLGKKQMIENEVNILRSVNHPNIIKLLDEY 444
+G G + V + K + A+K + + + + + E +++ + HPN+++LL
Sbjct: 23 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTM--EVEEFLKEAAVMKEIKHPNLVQLLGVC 80
Query: 445 DTNNELYLVIELIKGGDLFDAISKNVKFSEEDSK---FMTQSLASALSYLHDNYIVHRDI 501
Y++ E + G+L D + + E ++ +M ++SA+ YL +HRD+
Sbjct: 81 TREPPFYIITEFMTYGNLLDYL-RECNRQEVNAVVLLYMATQISSAMEYLEKKNFIHRDL 139
Query: 502 KPENLLVEMSGCHVKVLKVGDFGLAQRVLRPMFTVCGTP----TYVAPEILNESGYGVKI 557
N LV + ++KV DFGL++ + +T + APE L + + +K
Sbjct: 140 AARNCLVGEN----HLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKS 195
Query: 558 DVWAAGVILY-ILLCGFPPFVSDTNDQDELFDDILSGQYGFPSPYWDDISEEAKELISHM 616
DVWA GV+L+ I G P+ D +++ ++L Y P + E+ EL+
Sbjct: 196 DVWAFGVLLWEIATYGMSPYPGI--DLSQVY-ELLEKDYRMERP--EGCPEKVYELMRAC 250
Query: 617 LESNPDLRFSAEDV 630
+ NP R S ++
Sbjct: 251 WQWNPSDRPSFAEI 264
>pdb|1OPK|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 495
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 62/255 (24%), Positives = 119/255 (46%), Gaps = 22/255 (8%)
Query: 385 IGDGNFAVVRQVYDKHKDMDCALKIIDKSKLLGKKQMIENEVNILRSVNHPNIIKLLDEY 444
+G G + V + K + A+K + + + + + E +++ + HPN+++LL
Sbjct: 228 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTM--EVEEFLKEAAVMKEIKHPNLVQLLGVC 285
Query: 445 DTNNELYLVIELIKGGDLFDAISKNVKFSEEDSK----FMTQSLASALSYLHDNYIVHRD 500
Y++ E + G+L D + + + +E S +M ++SA+ YL +HR+
Sbjct: 286 TREPPFYIITEFMTYGNLLDYLRECNR--QEVSAVVLLYMATQISSAMEYLEKKNFIHRN 343
Query: 501 IKPENLLVEMSGCHVKVLKVGDFGLAQRVLRPMFTVCGTP----TYVAPEILNESGYGVK 556
+ N LV + ++KV DFGL++ + +T + APE L + + +K
Sbjct: 344 LAARNCLVGEN----HLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIK 399
Query: 557 IDVWAAGVILY-ILLCGFPPFVSDTNDQDELFDDILSGQYGFPSPYWDDISEEAKELISH 615
DVWA GV+L+ I G P+ D +++ ++L Y P + E+ EL+
Sbjct: 400 SDVWAFGVLLWEIATYGMSPYPGI--DLSQVY-ELLEKDYRMERP--EGCPEKVYELMRA 454
Query: 616 MLESNPDLRFSAEDV 630
+ NP R S ++
Sbjct: 455 CWQWNPSDRPSFAEI 469
>pdb|4EUT|A Chain A, Structure Of Bx-795 Complexed With Unphosphorylated Human
Tbk1 Kinase- Uld Domain
pdb|4EUT|B Chain B, Structure Of Bx-795 Complexed With Unphosphorylated Human
Tbk1 Kinase- Uld Domain
Length = 396
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 57/209 (27%), Positives = 99/209 (47%), Gaps = 17/209 (8%)
Query: 384 IIGDGNFA-VVRQVYDKHKDMDCALKIIDKSKLLGKKQMIENEVNILRSVNHPNIIKL-- 440
I+G G A V R + K D+ A+K+ + L + E +L+ +NH NI+KL
Sbjct: 16 ILGQGATANVFRGRHKKTGDL-FAIKVFNNISFLRPVDVQMREFEVLKKLNHKNIVKLFA 74
Query: 441 LDEYDTNNELYLVIELIKGGDLFDAI---SKNVKFSEEDSKFMTQSLASALSYLHDNYIV 497
++E T L++E G L+ + S E + + + + +++L +N IV
Sbjct: 75 IEEETTTRHKVLIMEFCPCGSLYTVLEEPSNAYGLPESEFLIVLRDVVGGMNHLRENGIV 134
Query: 498 HRDIKPENLLVEMSGCHVKVLKVGDFGLAQRVL--RPMFTVCGTPTYVAPEIL------- 548
HR+IKP N++ + V K+ DFG A+ + ++ GT Y+ P++
Sbjct: 135 HRNIKPGNIMRVIGEDGQSVYKLTDFGAARELEDDEQFVSLYGTEEYLHPDMYERAVLRK 194
Query: 549 -NESGYGVKIDVWAAGVILYILLCGFPPF 576
++ YG +D+W+ GV Y G PF
Sbjct: 195 DHQKKYGATVDLWSIGVTFYHAATGSLPF 223
>pdb|4FNX|A Chain A, Crystal Structure Of The Apo R1275q Anaplastic Lymphoma
Kinase Catalytic Domain
pdb|4FNY|A Chain A, Crystal Structure Of The R1275q Anaplastic Lymphoma Kinase
Catalytic Domain In Complex With A Benzoxazole Inhibitor
Length = 327
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 51/182 (28%), Positives = 88/182 (48%), Gaps = 16/182 (8%)
Query: 425 EVNILRSVNHPNIIKLLDEYDTNNELYLVIELIKGGDLFDAISKNVKFSEEDSKF----- 479
E I+ NH NI++ + + ++++EL+ GGDL + + + S
Sbjct: 84 EALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDL 143
Query: 480 --MTQSLASALSYLHDNYIVHRDIKPENLLVEMSGCHVKVLKVGDFGLAQRVLRPMFTVC 537
+ + +A YL +N+ +HRDI N L+ G +V K+GDFG+AQ + R +
Sbjct: 144 LHVARDIACGCQYLEENHFIHRDIAARNCLLTCPG-PGRVAKIGDFGMAQDIYRASYYRK 202
Query: 538 GTPT-----YVAPEILNESGYGVKIDVWAAGVILY-ILLCGFPPFVSDTNDQDELFDDIL 591
G ++ PE E + K D W+ GV+L+ I G+ P+ S +N E+ + +
Sbjct: 203 GGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSN--QEVLEFVT 260
Query: 592 SG 593
SG
Sbjct: 261 SG 262
>pdb|1RJB|A Chain A, Crystal Structure Of Flt3
Length = 344
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 63/230 (27%), Positives = 110/230 (47%), Gaps = 39/230 (16%)
Query: 382 GQIIGDGNFAVVRQV--YDKHK---DMDCALKIIDKSKLLGKKQMIENEVNILRSV-NHP 435
G+++G G F V Y K + A+K++ + +++ + +E+ ++ + +H
Sbjct: 50 GKVLGSGAFGKVMNATAYGISKTGVSIQVAVKMLKEKADSSEREALMSELKMMTQLGSHE 109
Query: 436 NIIKLLDEYDTNNELYLVIELIKGGDLFDAI-SKNVKFSEEDSKFMTQ------------ 482
NI+ LL + +YL+ E GDL + + SK KFSE++ ++ Q
Sbjct: 110 NIVNLLGACTLSGPIYLIFEYCCYGDLLNYLRSKREKFSEDEIEYENQKRLEEEEDLNVL 169
Query: 483 ----------SLASALSYLHDNYIVHRDIKPENLLVEMSGCHVKVLKVGDFGLAQRVLR- 531
+A + +L VHRD+ N+LV H KV+K+ DFGLA+ ++
Sbjct: 170 TFEDLLCFAYQVAKGMEFLEFKSCVHRDLAARNVLV----THGKVVKICDFGLARDIMSD 225
Query: 532 PMFTVCGTP----TYVAPEILNESGYGVKIDVWAAGVILY-ILLCGFPPF 576
+ V G ++APE L E Y +K DVW+ G++L+ I G P+
Sbjct: 226 SNYVVRGNARLPVKWMAPESLFEGIYTIKSDVWSYGILLWEIFSLGVNPY 275
>pdb|1OPL|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPL|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 537
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 61/254 (24%), Positives = 118/254 (46%), Gaps = 20/254 (7%)
Query: 385 IGDGNFAVVRQVYDKHKDMDCALKIIDKSKLLGKKQMIENEVNILRSVNHPNIIKLLDEY 444
+G G + V + K + A+K + + + + + E +++ + HPN+++LL
Sbjct: 267 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTM--EVEEFLKEAAVMKEIKHPNLVQLLGVC 324
Query: 445 DTNNELYLVIELIKGGDLFDAISKNVKFSEEDSK---FMTQSLASALSYLHDNYIVHRDI 501
Y++ E + G+L D + + E ++ +M ++SA+ YL +HR++
Sbjct: 325 TREPPFYIITEFMTYGNLLDYL-RECNRQEVNAVVLLYMATQISSAMEYLEKKNFIHRNL 383
Query: 502 KPENLLVEMSGCHVKVLKVGDFGLAQRVLRPMFTVCGTP----TYVAPEILNESGYGVKI 557
N LV + ++KV DFGL++ + +T + APE L + + +K
Sbjct: 384 AARNCLVGEN----HLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKS 439
Query: 558 DVWAAGVILY-ILLCGFPPFVSDTNDQDELFDDILSGQYGFPSPYWDDISEEAKELISHM 616
DVWA GV+L+ I G P+ D +++ ++L Y P + E+ EL+
Sbjct: 440 DVWAFGVLLWEIATYGMSPYPGI--DLSQVY-ELLEKDYRMERP--EGCPEKVYELMRAC 494
Query: 617 LESNPDLRFSAEDV 630
+ NP R S ++
Sbjct: 495 WQWNPSDRPSFAEI 508
>pdb|3SDJ|A Chain A, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|B Chain B, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|C Chain C, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|D Chain D, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|E Chain E, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|F Chain F, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|G Chain G, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|H Chain H, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|I Chain I, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|J Chain J, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|K Chain K, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|L Chain L, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|M Chain M, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|N Chain N, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
Length = 448
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 87/302 (28%), Positives = 140/302 (46%), Gaps = 56/302 (18%)
Query: 367 ENLNIPSKLLQRYSVGQIIGDGNF-----AVVRQVYDKHKDMDCALKIIDKSKLLGKKQM 421
+NL + K+L S G ++ G+F AV R + D D AL I KLL +
Sbjct: 32 KNLVVSEKILGYGSSGTVVFQGSFQGRPVAVKRMLIDF---CDIALMEI---KLLTE--- 82
Query: 422 IENEVNILRSVNHPNIIKLLDEYDTNNELYLVIELIKGGDLFDAI-SKNVKFSEEDSKF- 479
S +HPN+I+ T+ LY+ +EL +L D + SKNV S+E+ K
Sbjct: 83 ---------SDDHPNVIRYYCSETTDRFLYIALELC-NLNLQDLVESKNV--SDENLKLQ 130
Query: 480 -------MTQSLASALSYLHDNYIVHRDIKPENLLV---------EMSGCHVKVLKVGDF 523
+ + +AS +++LH I+HRD+KP+N+LV + +G + + DF
Sbjct: 131 KEYNPISLLRQIASGVAHLHSLKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDF 190
Query: 524 GLAQRV-------LRPMFTVCGTPTYVAPEILNESG---YGVKIDVWAAGVILYILLC-G 572
GL +++ + GT + APE+L ES ID+++ G + Y +L G
Sbjct: 191 GLCKKLDSGQXXFRXNLNNPSGTSGWRAPELLEESTKRRLTRSIDIFSMGCVFYYILSKG 250
Query: 573 FPPFVSDTNDQDELFDDILSGQYGFPSPYWDDISEEAKELISHMLESNPDLRFSAEDVLD 632
PF + + + I S + + EA +LIS M++ +P R +A VL
Sbjct: 251 KHPFGDKYSRESNIIRGIFSLD-EMKCLHDRSLIAEATDLISQMIDHDPLKRPTAMKVLR 309
Query: 633 HP 634
HP
Sbjct: 310 HP 311
>pdb|2FO0|A Chain A, Organization Of The Sh3-Sh2 Unit In Active And Inactive
Forms Of The C-Abl Tyrosine Kinase
Length = 495
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 61/254 (24%), Positives = 118/254 (46%), Gaps = 20/254 (7%)
Query: 385 IGDGNFAVVRQVYDKHKDMDCALKIIDKSKLLGKKQMIENEVNILRSVNHPNIIKLLDEY 444
+G G + V + K + A+K + + + + + E +++ + HPN+++LL
Sbjct: 225 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTM--EVEEFLKEAAVMKEIKHPNLVQLLGVC 282
Query: 445 DTNNELYLVIELIKGGDLFDAISKNVKFSEEDSK---FMTQSLASALSYLHDNYIVHRDI 501
Y++ E + G+L D + + E ++ +M ++SA+ YL +HR++
Sbjct: 283 TREPPFYIITEFMTYGNLLDYL-RECNRQEVNAVVLLYMATQISSAMEYLEKKNFIHRNL 341
Query: 502 KPENLLVEMSGCHVKVLKVGDFGLAQRVLRPMFTVCGTP----TYVAPEILNESGYGVKI 557
N LV + ++KV DFGL++ + +T + APE L + + +K
Sbjct: 342 AARNCLVGEN----HLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKS 397
Query: 558 DVWAAGVILY-ILLCGFPPFVSDTNDQDELFDDILSGQYGFPSPYWDDISEEAKELISHM 616
DVWA GV+L+ I G P+ D +++ ++L Y P + E+ EL+
Sbjct: 398 DVWAFGVLLWEIATYGMSPYPGI--DLSQVY-ELLEKDYRMERP--EGCPEKVYELMRAC 452
Query: 617 LESNPDLRFSAEDV 630
+ NP R S ++
Sbjct: 453 WQWNPSDRPSFAEI 466
>pdb|3FBV|A Chain A, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|B Chain B, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|C Chain C, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|D Chain D, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|E Chain E, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|F Chain F, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|G Chain G, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|H Chain H, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|I Chain I, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|J Chain J, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|K Chain K, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|L Chain L, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|M Chain M, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|N Chain N, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3SDM|A Chain A, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|B Chain B, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|C Chain C, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|D Chain D, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|E Chain E, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|F Chain F, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|G Chain G, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
Length = 448
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 87/302 (28%), Positives = 140/302 (46%), Gaps = 56/302 (18%)
Query: 367 ENLNIPSKLLQRYSVGQIIGDGNF-----AVVRQVYDKHKDMDCALKIIDKSKLLGKKQM 421
+NL + K+L S G ++ G+F AV R + D D AL I KLL +
Sbjct: 32 KNLVVSEKILGYGSSGTVVFQGSFQGRPVAVKRMLIDF---CDIALMEI---KLLTE--- 82
Query: 422 IENEVNILRSVNHPNIIKLLDEYDTNNELYLVIELIKGGDLFDAI-SKNVKFSEEDSKF- 479
S +HPN+I+ T+ LY+ +EL +L D + SKNV S+E+ K
Sbjct: 83 ---------SDDHPNVIRYYCSETTDRFLYIALELC-NLNLQDLVESKNV--SDENLKLQ 130
Query: 480 -------MTQSLASALSYLHDNYIVHRDIKPENLLV---------EMSGCHVKVLKVGDF 523
+ + +AS +++LH I+HRD+KP+N+LV + +G + + DF
Sbjct: 131 KEYNPISLLRQIASGVAHLHSLKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDF 190
Query: 524 GLAQRV-------LRPMFTVCGTPTYVAPEILNESG---YGVKIDVWAAGVILYILLC-G 572
GL +++ + GT + APE+L ES ID+++ G + Y +L G
Sbjct: 191 GLCKKLDSGQXXFRXNLNNPSGTSGWRAPELLEESTKRRLTRSIDIFSMGCVFYYILSKG 250
Query: 573 FPPFVSDTNDQDELFDDILSGQYGFPSPYWDDISEEAKELISHMLESNPDLRFSAEDVLD 632
PF + + + I S + + EA +LIS M++ +P R +A VL
Sbjct: 251 KHPFGDKYSRESNIIRGIFSLD-EMKCLHDRSLIAEATDLISQMIDHDPLKRPTAMKVLR 309
Query: 633 HP 634
HP
Sbjct: 310 HP 311
>pdb|4EUU|A Chain A, Structure Of Bx-795 Complexed With Human Tbk1 Kinase
Domain Phosphorylated On Ser172
pdb|4EUU|B Chain B, Structure Of Bx-795 Complexed With Human Tbk1 Kinase
Domain Phosphorylated On Ser172
Length = 319
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 57/209 (27%), Positives = 98/209 (46%), Gaps = 17/209 (8%)
Query: 384 IIGDGNFA-VVRQVYDKHKDMDCALKIIDKSKLLGKKQMIENEVNILRSVNHPNIIKL-- 440
I+G G A V R + K D+ A+K+ + L + E +L+ +NH NI+KL
Sbjct: 16 ILGQGATANVFRGRHKKTGDL-FAIKVFNNISFLRPVDVQMREFEVLKKLNHKNIVKLFA 74
Query: 441 LDEYDTNNELYLVIELIKGGDLFDAI---SKNVKFSEEDSKFMTQSLASALSYLHDNYIV 497
++E T L++E G L+ + S E + + + + +++L +N IV
Sbjct: 75 IEEETTTRHKVLIMEFCPCGSLYTVLEEPSNAYGLPESEFLIVLRDVVGGMNHLRENGIV 134
Query: 498 HRDIKPENLLVEMSGCHVKVLKVGDFGLAQRVL--RPMFTVCGTPTYVAPEIL------- 548
HR+IKP N++ + V K+ DFG A+ + + GT Y+ P++
Sbjct: 135 HRNIKPGNIMRVIGEDGQSVYKLTDFGAARELEDDEQFVXLYGTEEYLHPDMYERAVLRK 194
Query: 549 -NESGYGVKIDVWAAGVILYILLCGFPPF 576
++ YG +D+W+ GV Y G PF
Sbjct: 195 DHQKKYGATVDLWSIGVTFYHAATGSLPF 223
>pdb|2GQG|A Chain A, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
pdb|2GQG|B Chain B, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
Length = 278
Score = 76.6 bits (187), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 62/254 (24%), Positives = 117/254 (46%), Gaps = 20/254 (7%)
Query: 385 IGDGNFAVVRQVYDKHKDMDCALKIIDKSKLLGKKQMIENEVNILRSVNHPNIIKLLDEY 444
+G G + V + K + A+K + + + + + E +++ + HPN+++LL
Sbjct: 26 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTM--EVEEFLKEAAVMKEIKHPNLVQLLGVC 83
Query: 445 DTNNELYLVIELIKGGDLFDAISKNVKFSEEDSK---FMTQSLASALSYLHDNYIVHRDI 501
Y++ E + G+L D + + E ++ +M ++SA+ YL +HRD+
Sbjct: 84 TREPPFYIITEFMTYGNLLDYL-RECNRQEVNAVVLLYMATQISSAMEYLEKKNFIHRDL 142
Query: 502 KPENLLVEMSGCHVKVLKVGDFGLAQRVLRPMFTVCGTP----TYVAPEILNESGYGVKI 557
N LV + ++KV DFGL++ + T + APE L + + +K
Sbjct: 143 AARNCLVGEN----HLVKVADFGLSRLMTGDTXTAHAGAKFPIKWTAPESLAYNKFSIKS 198
Query: 558 DVWAAGVILY-ILLCGFPPFVSDTNDQDELFDDILSGQYGFPSPYWDDISEEAKELISHM 616
DVWA GV+L+ I G P+ D +++ ++L Y P + E+ EL+
Sbjct: 199 DVWAFGVLLWEIATYGMSPYPGI--DLSQVY-ELLEKDYRMERP--EGCPEKVYELMRAC 253
Query: 617 LESNPDLRFSAEDV 630
+ NP R S ++
Sbjct: 254 WQWNPSDRPSFAEI 267
>pdb|4FNW|A Chain A, Crystal Structure Of The Apo F1174l Anaplastic Lymphoma
Kinase Catalytic Domain
Length = 327
Score = 76.6 bits (187), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 50/182 (27%), Positives = 89/182 (48%), Gaps = 16/182 (8%)
Query: 425 EVNILRSVNHPNIIKLLDEYDTNNELYLVIELIKGGDLFDAISKNVKFSEEDSKF----- 479
E I+ +NH NI++ + + ++++EL+ GGDL + + + S
Sbjct: 84 EALIISKLNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDL 143
Query: 480 --MTQSLASALSYLHDNYIVHRDIKPENLLVEMSGCHVKVLKVGDFGLAQRVLRPMFTVC 537
+ + +A YL +N+ +HRDI N L+ G +V K+GDFG+A+ + R +
Sbjct: 144 LHVARDIACGCQYLEENHFIHRDIAARNCLLTCPG-PGRVAKIGDFGMARDIYRASYYRK 202
Query: 538 GTPT-----YVAPEILNESGYGVKIDVWAAGVILY-ILLCGFPPFVSDTNDQDELFDDIL 591
G ++ PE E + K D W+ GV+L+ I G+ P+ S +N E+ + +
Sbjct: 203 GGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSN--QEVLEFVT 260
Query: 592 SG 593
SG
Sbjct: 261 SG 262
>pdb|4F0F|A Chain A, Crystal Structure Of The Roco4 Kinase Domain Bound To
Appcp From D. Discoideum
pdb|4F0G|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum
pdb|4F1T|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum Bound To The Rock Inhibitor H1152
Length = 287
Score = 76.3 bits (186), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 61/204 (29%), Positives = 105/204 (51%), Gaps = 14/204 (6%)
Query: 385 IGDGNFAVV---RQVYDKHKDMDCALKIID---KSKLLGKKQMIENEVNILRSVNHPNII 438
IG G F +V R V DK +L + D +++++ K Q + EV I+ ++NHPNI+
Sbjct: 27 IGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFIMSNLNHPNIV 86
Query: 439 KLLDEYDTNNELYLVIELIKGGDLFDAI---SKNVKFSEEDSKFMTQSLASALSYLHDNY 495
KL +N +V+E + GDL+ + + +K+S + + +L +
Sbjct: 87 KLYGL--MHNPPRMVMEFVPCGDLYHRLLDKAHPIKWSVKLRLMLDIALGIEYMQNQNPP 144
Query: 496 IVHRDIKPENLLVEMSGCHVKVL-KVGDFGLAQRVLRPMFTVCGTPTYVAPEILN--ESG 552
IVHRD++ N+ ++ + V KV DFGL+Q+ + + + G ++APE + E
Sbjct: 145 IVHRDLRSPNIFLQSLDENAPVCAKVADFGLSQQSVHSVSGLLGNFQWMAPETIGAEEES 204
Query: 553 YGVKIDVWAAGVILYILLCGFPPF 576
Y K D ++ +ILY +L G PF
Sbjct: 205 YTEKADTYSFAMILYTILTGEGPF 228
>pdb|3GVU|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
Gleevec
pdb|3HMI|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
5-Amino-3-{[4-
(Aminosulfonyl)phenyl]amino}-N-(2,
6-Difluorophenyl)-1h-1,2,4- Triazole-1-Carbothioamide
pdb|2XYN|A Chain A, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|B Chain B, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|C Chain C, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
Length = 292
Score = 76.3 bits (186), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 54/201 (26%), Positives = 96/201 (47%), Gaps = 17/201 (8%)
Query: 385 IGDGNFAVVRQVYDKHKDMDCALKIIDKSKLLGKKQMIENEVNILRSVNHPNIIKLLDEY 444
+G G + V K + A+K + + + + + E +++ + HPN+++LL
Sbjct: 40 LGGGQYGEVYVGVWKKYSLTVAVKTLKEDTM--EVEEFLKEAAVMKEIKHPNLVQLLGVC 97
Query: 445 DTNNELYLVIELIKGGDLFDAISKNVKFSEEDSK----FMTQSLASALSYLHDNYIVHRD 500
Y+V E + G+L D + + + EE + +M ++SA+ YL +HRD
Sbjct: 98 TLEPPFYIVTEYMPYGNLLDYLRECNR--EEVTAVVLLYMATQISSAMEYLEKKNFIHRD 155
Query: 501 IKPENLLVEMSGCHVKVLKVGDFGLAQRVLRPMFTVCGTP----TYVAPEILNESGYGVK 556
+ N LV + V+KV DFGL++ + +T + APE L + + +K
Sbjct: 156 LAARNCLVGEN----HVVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNTFSIK 211
Query: 557 IDVWAAGVILY-ILLCGFPPF 576
DVWA GV+L+ I G P+
Sbjct: 212 SDVWAFGVLLWEIATYGMSPY 232
>pdb|4FOB|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 1
pdb|4FOC|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 2
Length = 353
Score = 76.3 bits (186), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 50/182 (27%), Positives = 88/182 (48%), Gaps = 16/182 (8%)
Query: 425 EVNILRSVNHPNIIKLLDEYDTNNELYLVIELIKGGDLFDAISKNVKFSEEDSKF----- 479
E I+ NH NI++ + + ++++EL+ GGDL + + + S
Sbjct: 110 EALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDL 169
Query: 480 --MTQSLASALSYLHDNYIVHRDIKPENLLVEMSGCHVKVLKVGDFGLAQRVLRPMFTVC 537
+ + +A YL +N+ +HRDI N L+ G +V K+GDFG+A+ + R +
Sbjct: 170 LHVARDIACGCQYLEENHFIHRDIAARNCLLTCPG-PGRVAKIGDFGMARDIYRASYYRK 228
Query: 538 GTPT-----YVAPEILNESGYGVKIDVWAAGVILY-ILLCGFPPFVSDTNDQDELFDDIL 591
G ++ PE E + K D W+ GV+L+ I G+ P+ S +N E+ + +
Sbjct: 229 GGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSN--QEVLEFVT 286
Query: 592 SG 593
SG
Sbjct: 287 SG 288
>pdb|2YJR|A Chain A, Structure Of F1174l Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 76.3 bits (186), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 50/182 (27%), Positives = 89/182 (48%), Gaps = 16/182 (8%)
Query: 425 EVNILRSVNHPNIIKLLDEYDTNNELYLVIELIKGGDLFDAISKNVKFSEEDSKF----- 479
E I+ +NH NI++ + + ++++EL+ GGDL + + + S
Sbjct: 98 EALIISKLNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDL 157
Query: 480 --MTQSLASALSYLHDNYIVHRDIKPENLLVEMSGCHVKVLKVGDFGLAQRVLRPMFTVC 537
+ + +A YL +N+ +HRDI N L+ G +V K+GDFG+A+ + R +
Sbjct: 158 LHVARDIACGCQYLEENHFIHRDIAARNCLLTCPG-PGRVAKIGDFGMARDIYRASYYRK 216
Query: 538 GTPT-----YVAPEILNESGYGVKIDVWAAGVILY-ILLCGFPPFVSDTNDQDELFDDIL 591
G ++ PE E + K D W+ GV+L+ I G+ P+ S +N E+ + +
Sbjct: 217 GGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSN--QEVLEFVT 274
Query: 592 SG 593
SG
Sbjct: 275 SG 276
>pdb|3AOX|A Chain A, X-Ray Crystal Structure Of Human Anaplastic Lymphoma
Kinase In Complex With Ch5424802
Length = 344
Score = 75.9 bits (185), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 50/182 (27%), Positives = 88/182 (48%), Gaps = 16/182 (8%)
Query: 425 EVNILRSVNHPNIIKLLDEYDTNNELYLVIELIKGGDLFDAISKNVKFSEEDSKF----- 479
E I+ NH NI++ + + ++++EL+ GGDL + + + S
Sbjct: 100 EALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDL 159
Query: 480 --MTQSLASALSYLHDNYIVHRDIKPENLLVEMSGCHVKVLKVGDFGLAQRVLRPMFTVC 537
+ + +A YL +N+ +HRDI N L+ G +V K+GDFG+A+ + R +
Sbjct: 160 LHVARDIACGCQYLEENHFIHRDIAARNCLLTCPG-PGRVAKIGDFGMARDIYRASYYRK 218
Query: 538 GTPT-----YVAPEILNESGYGVKIDVWAAGVILY-ILLCGFPPFVSDTNDQDELFDDIL 591
G ++ PE E + K D W+ GV+L+ I G+ P+ S +N E+ + +
Sbjct: 219 GGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSN--QEVLEFVT 276
Query: 592 SG 593
SG
Sbjct: 277 SG 278
>pdb|4FNZ|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Piperidine-Carboxamide Inhibitor 2
Length = 327
Score = 75.9 bits (185), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 50/182 (27%), Positives = 88/182 (48%), Gaps = 16/182 (8%)
Query: 425 EVNILRSVNHPNIIKLLDEYDTNNELYLVIELIKGGDLFDAISKNVKFSEEDSKF----- 479
E I+ NH NI++ + + ++++EL+ GGDL + + + S
Sbjct: 84 EALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDL 143
Query: 480 --MTQSLASALSYLHDNYIVHRDIKPENLLVEMSGCHVKVLKVGDFGLAQRVLRPMFTVC 537
+ + +A YL +N+ +HRDI N L+ G +V K+GDFG+A+ + R +
Sbjct: 144 LHVARDIACGCQYLEENHFIHRDIAARNCLLTCPG-PGRVAKIGDFGMARDIYRASYYRK 202
Query: 538 GTPT-----YVAPEILNESGYGVKIDVWAAGVILY-ILLCGFPPFVSDTNDQDELFDDIL 591
G ++ PE E + K D W+ GV+L+ I G+ P+ S +N E+ + +
Sbjct: 203 GGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSN--QEVLEFVT 260
Query: 592 SG 593
SG
Sbjct: 261 SG 262
>pdb|4DCE|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With A Piperidine-Carboxamide Inhibitor
pdb|4DCE|B Chain B, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With A Piperidine-Carboxamide Inhibitor
pdb|4FOD|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 36
Length = 333
Score = 75.9 bits (185), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 50/182 (27%), Positives = 88/182 (48%), Gaps = 16/182 (8%)
Query: 425 EVNILRSVNHPNIIKLLDEYDTNNELYLVIELIKGGDLFDAISKNVKFSEEDSKF----- 479
E I+ NH NI++ + + ++++EL+ GGDL + + + S
Sbjct: 90 EALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDL 149
Query: 480 --MTQSLASALSYLHDNYIVHRDIKPENLLVEMSGCHVKVLKVGDFGLAQRVLRPMFTVC 537
+ + +A YL +N+ +HRDI N L+ G +V K+GDFG+A+ + R +
Sbjct: 150 LHVARDIACGCQYLEENHFIHRDIAARNCLLTCPG-PGRVAKIGDFGMARDIYRASYYRK 208
Query: 538 GTPT-----YVAPEILNESGYGVKIDVWAAGVILY-ILLCGFPPFVSDTNDQDELFDDIL 591
G ++ PE E + K D W+ GV+L+ I G+ P+ S +N E+ + +
Sbjct: 209 GGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSN--QEVLEFVT 266
Query: 592 SG 593
SG
Sbjct: 267 SG 268
>pdb|2NRY|A Chain A, Crystal Structure Of Irak-4
pdb|2NRY|B Chain B, Crystal Structure Of Irak-4
pdb|2NRY|C Chain C, Crystal Structure Of Irak-4
pdb|2NRY|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 75.9 bits (185), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 59/205 (28%), Positives = 98/205 (47%), Gaps = 20/205 (9%)
Query: 382 GQIIGDGNFAVVRQVYDKHKDMD----CALKIIDKSKLLGKKQMIENEVNILRSVNHPNI 437
G +G+G F VV + Y + + A+ I +L KQ + E+ ++ H N+
Sbjct: 36 GNKMGEGGFGVVYKGYVNNTTVAVKKLAAMVDITTEEL---KQQFDQEIKVMAKCQHENL 92
Query: 438 IKLLDEYDTNNELYLVIELIKGGDLFDAIS---KNVKFSEEDSKFMTQSLASALSYLHDN 494
++LL ++L LV + G L D +S S + Q A+ +++LH+N
Sbjct: 93 VELLGFSSDGDDLCLVYVYMPNGSLLDRLSCLDGTPPLSWHMRCKIAQGAANGINFLHEN 152
Query: 495 YIVHRDIKPENLLVEMSGCHVKVLKVGDFGLAQRVLRPMFTV-----CGTPTYVAPEILN 549
+ +HRDIK N+L++ K+ DFGLA+ + TV GT Y+APE L
Sbjct: 153 HHIHRDIKSANILLD----EAFTAKISDFGLARASEKFAQTVMXSRIVGTTAYMAPEAL- 207
Query: 550 ESGYGVKIDVWAAGVILYILLCGFP 574
K D+++ GV+L ++ G P
Sbjct: 208 RGEITPKSDIYSFGVVLLEIITGLP 232
>pdb|2XP2|A Chain A, Structure Of The Human Anaplastic Lymphoma Kinase In
Complex With Crizotinib (Pf-02341066)
Length = 327
Score = 75.9 bits (185), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 50/182 (27%), Positives = 88/182 (48%), Gaps = 16/182 (8%)
Query: 425 EVNILRSVNHPNIIKLLDEYDTNNELYLVIELIKGGDLFDAISKNVKFSEEDSKF----- 479
E I+ NH NI++ + + ++++EL+ GGDL + + + S
Sbjct: 83 EALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDL 142
Query: 480 --MTQSLASALSYLHDNYIVHRDIKPENLLVEMSGCHVKVLKVGDFGLAQRVLRPMFTVC 537
+ + +A YL +N+ +HRDI N L+ G +V K+GDFG+A+ + R +
Sbjct: 143 LHVARDIACGCQYLEENHFIHRDIAARNCLLTCPG-PGRVAKIGDFGMARDIYRASYYRK 201
Query: 538 GTPT-----YVAPEILNESGYGVKIDVWAAGVILY-ILLCGFPPFVSDTNDQDELFDDIL 591
G ++ PE E + K D W+ GV+L+ I G+ P+ S +N E+ + +
Sbjct: 202 GGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSN--QEVLEFVT 259
Query: 592 SG 593
SG
Sbjct: 260 SG 261
>pdb|2XB7|A Chain A, Structure Of Human Anaplastic Lymphoma Kinase In Complex
With Nvp- Tae684
pdb|2XBA|A Chain A, Structure Of Human Anaplastic Lymphoma Kinase In Complex
With Pha-E429
Length = 315
Score = 75.9 bits (185), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 50/182 (27%), Positives = 88/182 (48%), Gaps = 16/182 (8%)
Query: 425 EVNILRSVNHPNIIKLLDEYDTNNELYLVIELIKGGDLFDAISKNVKFSEEDSKF----- 479
E I+ NH NI++ + + ++++EL+ GGDL + + + S
Sbjct: 75 EALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDL 134
Query: 480 --MTQSLASALSYLHDNYIVHRDIKPENLLVEMSGCHVKVLKVGDFGLAQRVLRPMFTVC 537
+ + +A YL +N+ +HRDI N L+ G +V K+GDFG+A+ + R +
Sbjct: 135 LHVARDIACGCQYLEENHFIHRDIAARNCLLTCPG-PGRVAKIGDFGMARDIYRASYYRK 193
Query: 538 GTPT-----YVAPEILNESGYGVKIDVWAAGVILY-ILLCGFPPFVSDTNDQDELFDDIL 591
G ++ PE E + K D W+ GV+L+ I G+ P+ S +N E+ + +
Sbjct: 194 GGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSN--QEVLEFVT 251
Query: 592 SG 593
SG
Sbjct: 252 SG 253
>pdb|2NRU|A Chain A, Crystal Structure Of Irak-4
pdb|2NRU|B Chain B, Crystal Structure Of Irak-4
pdb|2NRU|C Chain C, Crystal Structure Of Irak-4
pdb|2NRU|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 75.9 bits (185), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 59/205 (28%), Positives = 98/205 (47%), Gaps = 20/205 (9%)
Query: 382 GQIIGDGNFAVVRQVYDKHKDMD----CALKIIDKSKLLGKKQMIENEVNILRSVNHPNI 437
G +G+G F VV + Y + + A+ I +L KQ + E+ ++ H N+
Sbjct: 36 GNKMGEGGFGVVYKGYVNNTTVAVKKLAAMVDITTEEL---KQQFDQEIKVMAKCQHENL 92
Query: 438 IKLLDEYDTNNELYLVIELIKGGDLFDAIS---KNVKFSEEDSKFMTQSLASALSYLHDN 494
++LL ++L LV + G L D +S S + Q A+ +++LH+N
Sbjct: 93 VELLGFSSDGDDLCLVYVYMPNGSLLDRLSCLDGTPPLSWHMRCKIAQGAANGINFLHEN 152
Query: 495 YIVHRDIKPENLLVEMSGCHVKVLKVGDFGLAQRVLRPMFTV-----CGTPTYVAPEILN 549
+ +HRDIK N+L++ K+ DFGLA+ + TV GT Y+APE L
Sbjct: 153 HHIHRDIKSANILLD----EAFTAKISDFGLARASEKFAQTVMXXRIVGTTAYMAPEAL- 207
Query: 550 ESGYGVKIDVWAAGVILYILLCGFP 574
K D+++ GV+L ++ G P
Sbjct: 208 RGEITPKSDIYSFGVVLLEIITGLP 232
>pdb|2RIO|A Chain A, Structure Of The Dual Enzyme Ire1 Reveals The Basis For
Catalysis And Regulation Of Non-conventional Splicing
pdb|2RIO|B Chain B, Structure Of The Dual Enzyme Ire1 Reveals The Basis For
Catalysis And Regulation Of Non-conventional Splicing
Length = 434
Score = 75.5 bits (184), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 87/307 (28%), Positives = 140/307 (45%), Gaps = 62/307 (20%)
Query: 367 ENLNIPSKLLQRYSVGQIIGDGNF-----AVVRQVYDKHKDMDCALKIIDKSKLLGKKQM 421
+NL + K+L S G ++ G+F AV R + D D AL I KLL +
Sbjct: 14 KNLVVSEKILGYGSSGTVVFQGSFQGRPVAVKRMLIDF---CDIALMEI---KLLTE--- 64
Query: 422 IENEVNILRSVNHPNIIKLLDEYDTNNELYLVIEL--IKGGDLFDAISKNVKFSEEDSKF 479
S +HPN+I+ T+ LY+ +EL + DL + SKNV S+E+ K
Sbjct: 65 ---------SDDHPNVIRYYCSETTDRFLYIALELCNLNLQDLVE--SKNV--SDENLKL 111
Query: 480 --------MTQSLASALSYLHDNYIVHRDIKPENLLV---------EMSGCHVKVLKVGD 522
+ + +AS +++LH I+HRD+KP+N+LV + +G + + D
Sbjct: 112 QKEYNPISLLRQIASGVAHLHSLKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISD 171
Query: 523 FGLAQRVLRPMFTV-------CGTPTYVAPEILNESG-------YGVKIDVWAAGVILYI 568
FGL +++ + GT + APE+L ES ID+++ G + Y
Sbjct: 172 FGLCKKLDSGQSSFRTNLNNPSGTSGWRAPELLEESNNLQTKRRLTRSIDIFSMGCVFYY 231
Query: 569 LLC-GFPPFVSDTNDQDELFDDILSGQYGFPSPYWDDISEEAKELISHMLESNPDLRFSA 627
+L G PF + + + I S + + EA +LIS M++ +P R +A
Sbjct: 232 ILSKGKHPFGDKYSRESNIIRGIFSLD-EMKCLHDRSLIAEATDLISQMIDHDPLKRPTA 290
Query: 628 EDVLDHP 634
VL HP
Sbjct: 291 MKVLRHP 297
>pdb|3LCT|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
pdb|3LCS|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
Length = 344
Score = 75.5 bits (184), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 50/182 (27%), Positives = 88/182 (48%), Gaps = 16/182 (8%)
Query: 425 EVNILRSVNHPNIIKLLDEYDTNNELYLVIELIKGGDLFDAISKNVKFSEEDSKF----- 479
E I+ NH NI++ + + ++++EL+ GGDL + + + S
Sbjct: 101 EALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDL 160
Query: 480 --MTQSLASALSYLHDNYIVHRDIKPENLLVEMSGCHVKVLKVGDFGLAQRVLRPMFTVC 537
+ + +A YL +N+ +HRDI N L+ G +V K+GDFG+A+ + R +
Sbjct: 161 LHVARDIACGCQYLEENHFIHRDIAARNCLLTCPG-PGRVAKIGDFGMARDIYRAGYYRK 219
Query: 538 GTPT-----YVAPEILNESGYGVKIDVWAAGVILY-ILLCGFPPFVSDTNDQDELFDDIL 591
G ++ PE E + K D W+ GV+L+ I G+ P+ S +N E+ + +
Sbjct: 220 GGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSN--QEVLEFVT 277
Query: 592 SG 593
SG
Sbjct: 278 SG 279
>pdb|3L9P|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
Length = 367
Score = 75.5 bits (184), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 50/182 (27%), Positives = 88/182 (48%), Gaps = 16/182 (8%)
Query: 425 EVNILRSVNHPNIIKLLDEYDTNNELYLVIELIKGGDLFDAISKNVKFSEEDSKF----- 479
E I+ NH NI++ + + ++++EL+ GGDL + + + S
Sbjct: 124 EALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDL 183
Query: 480 --MTQSLASALSYLHDNYIVHRDIKPENLLVEMSGCHVKVLKVGDFGLAQRVLRPMFTVC 537
+ + +A YL +N+ +HRDI N L+ G +V K+GDFG+A+ + R +
Sbjct: 184 LHVARDIACGCQYLEENHFIHRDIAARNCLLTCPG-PGRVAKIGDFGMARDIYRAGYYRK 242
Query: 538 GTPT-----YVAPEILNESGYGVKIDVWAAGVILY-ILLCGFPPFVSDTNDQDELFDDIL 591
G ++ PE E + K D W+ GV+L+ I G+ P+ S +N E+ + +
Sbjct: 243 GGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSN--QEVLEFVT 300
Query: 592 SG 593
SG
Sbjct: 301 SG 302
>pdb|1K2P|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Domain
pdb|1K2P|B Chain B, Crystal Structure Of Bruton's Tyrosine Kinase Domain
Length = 263
Score = 75.5 bits (184), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 58/206 (28%), Positives = 103/206 (50%), Gaps = 15/206 (7%)
Query: 385 IGDGNFAVVRQVYDKHK-DMDCALKIIDKSKLLGKKQMIENEVNILRSVNHPNIIKLLDE 443
+G G F VV+ Y K + D A+K+I K + + + IE E ++ +++H +++L
Sbjct: 12 LGTGQFGVVK--YGKWRGQYDVAIKMI-KEGSMSEDEFIE-EAKVMMNLSHEKLVQLYGV 67
Query: 444 YDTNNELYLVIELIKGGDLFDAISK-NVKFSEEDSKFMTQSLASALSYLHDNYIVHRDIK 502
++++ E + G L + + + +F + M + + A+ YL +HRD+
Sbjct: 68 CTKQRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYLESKQFLHRDLA 127
Query: 503 PENLLVEMSGCHVKVLKVGDFGLAQRVLRPMFT-VCGTP---TYVAPEILNESGYGVKID 558
N LV G V+KV DFGL++ VL +T G+ + PE+L S + K D
Sbjct: 128 ARNCLVNDQG----VVKVSDFGLSRYVLDDEYTSSVGSKFPVRWSPPEVLMYSKFSSKSD 183
Query: 559 VWAAGVILY-ILLCGFPPFVSDTNDQ 583
+WA GV+++ I G P+ TN +
Sbjct: 184 IWAFGVLMWEIYSLGKMPYERFTNSE 209
>pdb|2YFX|A Chain A, Structure Of L1196m Mutant Anaplastic Lymphoma Kinase In
Complex With Crizotinib
Length = 327
Score = 75.5 bits (184), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 50/182 (27%), Positives = 88/182 (48%), Gaps = 16/182 (8%)
Query: 425 EVNILRSVNHPNIIKLLDEYDTNNELYLVIELIKGGDLFDAISKNVKFSEEDSKF----- 479
E I+ NH NI++ + + ++++EL+ GGDL + + + S
Sbjct: 83 EALIISKFNHQNIVRCIGVSLQSLPRFILMELMAGGDLKSFLRETRPRPSQPSSLAMLDL 142
Query: 480 --MTQSLASALSYLHDNYIVHRDIKPENLLVEMSGCHVKVLKVGDFGLAQRVLRPMFTVC 537
+ + +A YL +N+ +HRDI N L+ G +V K+GDFG+A+ + R +
Sbjct: 143 LHVARDIACGCQYLEENHFIHRDIAARNCLLTCPG-PGRVAKIGDFGMARDIYRASYYRK 201
Query: 538 GTPT-----YVAPEILNESGYGVKIDVWAAGVILY-ILLCGFPPFVSDTNDQDELFDDIL 591
G ++ PE E + K D W+ GV+L+ I G+ P+ S +N E+ + +
Sbjct: 202 GGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSN--QEVLEFVT 259
Query: 592 SG 593
SG
Sbjct: 260 SG 261
>pdb|3LL6|A Chain A, Crystal Structure Of The Human Cyclin G Associated Kinase
(gak)
pdb|3LL6|B Chain B, Crystal Structure Of The Human Cyclin G Associated Kinase
(gak)
Length = 337
Score = 75.5 bits (184), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 80/284 (28%), Positives = 126/284 (44%), Gaps = 42/284 (14%)
Query: 378 RYSVGQIIGDGNFAVVRQVYDKHKDMDCALKIIDKSKLLGKKQMIENEVNILRSVNHPNI 437
R V +++ +G FA V + D + ALK + ++ + +I+ + + HPNI
Sbjct: 29 RLRVRRVLAEGGFAFVYEAQDVGSGREYALKRLLSNEEEKNRAIIQEVCFMKKLSGHPNI 88
Query: 438 IKLL-------DEYDTNN-ELYLVIELIKGG--DLFDAISKNVKFSEEDSKFMTQSLASA 487
++ +E DT E L+ EL KG + + S + + A
Sbjct: 89 VQFCSAASIGKEESDTGQAEFLLLTELCKGQLVEFLKKMESRGPLSCDTVLKIFYQTCRA 148
Query: 488 LSYLHDNY--IVHRDIKPENLLVEMSGCHVKVLKVGDFG-------------LAQR--VL 530
+ ++H I+HRD+K ENLL+ G +K+ DFG AQR ++
Sbjct: 149 VQHMHRQKPPIIHRDLKVENLLLSNQG----TIKLCDFGSATTISHYPDYSWSAQRRALV 204
Query: 531 RPMFTVCGTPTYVAPEILN-ESGY--GVKIDVWAAGVILYILLCGFPPFVSDTNDQDELF 587
T TP Y PEI++ S + G K D+WA G ILY+L PF +D
Sbjct: 205 EEEITRNTTPMYRTPEIIDLYSNFPIGEKQDIWALGCILYLLCFRQHPF------EDGAK 258
Query: 588 DDILSGQYGFPSPYWDDISEEAKELISHMLESNPDLRFSAEDVL 631
I++G+Y P P+ D LI ML+ NP+ R S +V+
Sbjct: 259 LRIVNGKYSIP-PH-DTQYTVFHSLIRAMLQVNPEERLSIAEVV 300
>pdb|3P08|A Chain A, Crystal Structure Of The Human Btk Kinase Domain
pdb|3P08|B Chain B, Crystal Structure Of The Human Btk Kinase Domain
Length = 267
Score = 75.5 bits (184), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 58/206 (28%), Positives = 103/206 (50%), Gaps = 15/206 (7%)
Query: 385 IGDGNFAVVRQVYDKHK-DMDCALKIIDKSKLLGKKQMIENEVNILRSVNHPNIIKLLDE 443
+G G F VV+ Y K + D A+K+I K + + + IE E ++ +++H +++L
Sbjct: 16 LGTGQFGVVK--YGKWRGQYDVAIKMI-KEGSMSEDEFIE-EAKVMMNLSHEKLVQLYGV 71
Query: 444 YDTNNELYLVIELIKGGDLFDAISK-NVKFSEEDSKFMTQSLASALSYLHDNYIVHRDIK 502
++++ E + G L + + + +F + M + + A+ YL +HRD+
Sbjct: 72 CTKQRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYLESKQFLHRDLA 131
Query: 503 PENLLVEMSGCHVKVLKVGDFGLAQRVLRPMFT-VCGTP---TYVAPEILNESGYGVKID 558
N LV G V+KV DFGL++ VL +T G+ + PE+L S + K D
Sbjct: 132 ARNCLVNDQG----VVKVSDFGLSRYVLDDEYTSSVGSKFPVRWSPPEVLMYSKFSSKSD 187
Query: 559 VWAAGVILY-ILLCGFPPFVSDTNDQ 583
+WA GV+++ I G P+ TN +
Sbjct: 188 IWAFGVLMWEIYSLGKMPYERFTNSE 213
>pdb|2OO8|X Chain X, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2OSC|A Chain A, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2P4I|A Chain A, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|2P4I|B Chain B, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|3L8P|A Chain A, Crystal Structure Of Cytoplasmic Kinase Domain Of Tie2
Complexed With Inhibitor Cep11207
Length = 317
Score = 75.5 bits (184), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 79/271 (29%), Positives = 122/271 (45%), Gaps = 33/271 (12%)
Query: 384 IIGDGNFAVVRQVYDKHKD---MDCALKIIDKSKLLGKKQMIENEVNILRSV-NHPNIIK 439
+IG+GNF V + K KD MD A+K + + + E+ +L + +HPNII
Sbjct: 22 VIGEGNFGQVLKARIK-KDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIIN 80
Query: 440 LLDEYDTNNELYLVIELIKGGDLFDAISKNVKFSEEDSKFMTQSLASALS---------- 489
LL + LYL IE G+L D + K+ + + + S AS LS
Sbjct: 81 LLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAAD 140
Query: 490 ------YLHDNYIVHRDIKPENLLVEMSGCHVKVLKVGDFGLAQ-RVLRPMFTVCGTPT- 541
YL +HRD+ N+LV + V K+ DFGL++ + + T+ P
Sbjct: 141 VARGMDYLSQKQFIHRDLAARNILVGEN----YVAKIADFGLSRGQEVYVKKTMGRLPVR 196
Query: 542 YVAPEILNESGYGVKIDVWAAGVILY-ILLCGFPPFVSDTNDQDELFDDILSGQYGFPSP 600
++A E LN S Y DVW+ GV+L+ I+ G P+ T EL++ + G Y P
Sbjct: 197 WMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTC--AELYEKLPQG-YRLEKP 253
Query: 601 YWDDISEEAKELISHMLESNPDLRFSAEDVL 631
+ +E +L+ P R S +L
Sbjct: 254 L--NCDDEVYDLMRQCWREKPYERPSFAQIL 282
>pdb|3OCT|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Mutant V555r
In Complex With Dasatinib
Length = 265
Score = 75.5 bits (184), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 57/206 (27%), Positives = 101/206 (49%), Gaps = 15/206 (7%)
Query: 385 IGDGNFAVVRQVYDKHK-DMDCALKIIDKSKLLGKKQMIENEVNILRSVNHPNIIKLLDE 443
+G G F VV+ Y K + D A+K+I K + + + IE E ++ +++H +++L
Sbjct: 17 LGTGQFGVVK--YGKWRGQYDVAIKMI-KEGSMSEDEFIE-EAKVMMNLSHEKLVQLYGV 72
Query: 444 YDTNNELYLVIELIKGGDLFDAISK-NVKFSEEDSKFMTQSLASALSYLHDNYIVHRDIK 502
++++ E + G L + + + +F + M + + A+ YL +HRD+
Sbjct: 73 CTKQRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYLESKQFLHRDLA 132
Query: 503 PENLLVEMSGCHVKVLKVGDFGLAQRVLRPMFTVCGTPT----YVAPEILNESGYGVKID 558
N LV G V+KV DFGL++ VL +T + PE+L S + K D
Sbjct: 133 ARNCLVNDQG----VVKVSDFGLSRYVLDDEYTSSRGSKFPVRWSPPEVLMYSKFSSKSD 188
Query: 559 VWAAGVILY-ILLCGFPPFVSDTNDQ 583
+WA GV+++ I G P+ TN +
Sbjct: 189 IWAFGVLMWEIYSLGKMPYERFTNSE 214
>pdb|1FVR|A Chain A, Tie2 Kinase Domain
pdb|1FVR|B Chain B, Tie2 Kinase Domain
Length = 327
Score = 75.5 bits (184), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 79/271 (29%), Positives = 122/271 (45%), Gaps = 33/271 (12%)
Query: 384 IIGDGNFAVVRQVYDKHKD---MDCALKIIDKSKLLGKKQMIENEVNILRSV-NHPNIIK 439
+IG+GNF V + K KD MD A+K + + + E+ +L + +HPNII
Sbjct: 32 VIGEGNFGQVLKARIK-KDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIIN 90
Query: 440 LLDEYDTNNELYLVIELIKGGDLFDAISKNVKFSEEDSKFMTQSLASALS---------- 489
LL + LYL IE G+L D + K+ + + + S AS LS
Sbjct: 91 LLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAAD 150
Query: 490 ------YLHDNYIVHRDIKPENLLVEMSGCHVKVLKVGDFGLAQ-RVLRPMFTVCGTPT- 541
YL +HRD+ N+LV + V K+ DFGL++ + + T+ P
Sbjct: 151 VARGMDYLSQKQFIHRDLAARNILVGEN----YVAKIADFGLSRGQEVYVKKTMGRLPVR 206
Query: 542 YVAPEILNESGYGVKIDVWAAGVILY-ILLCGFPPFVSDTNDQDELFDDILSGQYGFPSP 600
++A E LN S Y DVW+ GV+L+ I+ G P+ T EL++ + G Y P
Sbjct: 207 WMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTC--AELYEKLPQG-YRLEKP 263
Query: 601 YWDDISEEAKELISHMLESNPDLRFSAEDVL 631
+ +E +L+ P R S +L
Sbjct: 264 L--NCDDEVYDLMRQCWREKPYERPSFAQIL 292
>pdb|2YHV|A Chain A, Structure Of L1196m Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 75.5 bits (184), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 50/182 (27%), Positives = 88/182 (48%), Gaps = 16/182 (8%)
Query: 425 EVNILRSVNHPNIIKLLDEYDTNNELYLVIELIKGGDLFDAISKNVKFSEEDSKF----- 479
E I+ NH NI++ + + ++++EL+ GGDL + + + S
Sbjct: 98 EALIISKFNHQNIVRCIGVSLQSLPRFILMELMAGGDLKSFLRETRPRPSQPSSLAMLDL 157
Query: 480 --MTQSLASALSYLHDNYIVHRDIKPENLLVEMSGCHVKVLKVGDFGLAQRVLRPMFTVC 537
+ + +A YL +N+ +HRDI N L+ G +V K+GDFG+A+ + R +
Sbjct: 158 LHVARDIACGCQYLEENHFIHRDIAARNCLLTCPG-PGRVAKIGDFGMARDIYRASYYRK 216
Query: 538 GTPT-----YVAPEILNESGYGVKIDVWAAGVILY-ILLCGFPPFVSDTNDQDELFDDIL 591
G ++ PE E + K D W+ GV+L+ I G+ P+ S +N E+ + +
Sbjct: 217 GGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSN--QEVLEFVT 274
Query: 592 SG 593
SG
Sbjct: 275 SG 276
>pdb|2YJS|A Chain A, Structure Of C1156y Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 75.5 bits (184), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 50/182 (27%), Positives = 88/182 (48%), Gaps = 16/182 (8%)
Query: 425 EVNILRSVNHPNIIKLLDEYDTNNELYLVIELIKGGDLFDAISKNVKFSEEDSKF----- 479
E I+ NH NI++ + + ++++EL+ GGDL + + + S
Sbjct: 98 EALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDL 157
Query: 480 --MTQSLASALSYLHDNYIVHRDIKPENLLVEMSGCHVKVLKVGDFGLAQRVLRPMFTVC 537
+ + +A YL +N+ +HRDI N L+ G +V K+GDFG+A+ + R +
Sbjct: 158 LHVARDIACGCQYLEENHFIHRDIAARNCLLTCPG-PGRVAKIGDFGMARDIYRASYYRK 216
Query: 538 GTPT-----YVAPEILNESGYGVKIDVWAAGVILY-ILLCGFPPFVSDTNDQDELFDDIL 591
G ++ PE E + K D W+ GV+L+ I G+ P+ S +N E+ + +
Sbjct: 217 GGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSN--QEVLEFVT 274
Query: 592 SG 593
SG
Sbjct: 275 SG 276
>pdb|3LJ0|A Chain A, Ire1 Complexed With Adp And Quercetin
pdb|3LJ0|B Chain B, Ire1 Complexed With Adp And Quercetin
pdb|3LJ1|A Chain A, Ire1 Complexed With Cdk12 INHIBITOR III
pdb|3LJ1|B Chain B, Ire1 Complexed With Cdk12 INHIBITOR III
pdb|3LJ2|A Chain A, Ire1 Complexed With Jak Inhibitor I
pdb|3LJ2|B Chain B, Ire1 Complexed With Jak Inhibitor I
Length = 434
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 87/307 (28%), Positives = 140/307 (45%), Gaps = 62/307 (20%)
Query: 367 ENLNIPSKLLQRYSVGQIIGDGNF-----AVVRQVYDKHKDMDCALKIIDKSKLLGKKQM 421
+NL + K+L S G ++ G+F AV R + D D AL I KLL +
Sbjct: 14 KNLVVSEKILGYGSSGTVVFQGSFQGRPVAVKRMLIDF---CDIALMEI---KLLTE--- 64
Query: 422 IENEVNILRSVNHPNIIKLLDEYDTNNELYLVIEL--IKGGDLFDAISKNVKFSEEDSKF 479
S +HPN+I+ T+ LY+ +EL + DL + SKNV S+E+ K
Sbjct: 65 ---------SDDHPNVIRYYCSETTDRFLYIALELCNLNLQDLVE--SKNV--SDENLKL 111
Query: 480 --------MTQSLASALSYLHDNYIVHRDIKPENLLV---------EMSGCHVKVLKVGD 522
+ + +AS +++LH I+HRD+KP+N+LV + +G + + D
Sbjct: 112 QKEYNPISLLRQIASGVAHLHSLKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISD 171
Query: 523 FGLAQRV-------LRPMFTVCGTPTYVAPEILNESG-------YGVKIDVWAAGVILYI 568
FGL +++ + GT + APE+L ES ID+++ G + Y
Sbjct: 172 FGLCKKLDSGQXXFRXNLNNPSGTSGWRAPELLEESNNLQTKRRLTRSIDIFSMGCVFYY 231
Query: 569 LLC-GFPPFVSDTNDQDELFDDILSGQYGFPSPYWDDISEEAKELISHMLESNPDLRFSA 627
+L G PF + + + I S + + EA +LIS M++ +P R +A
Sbjct: 232 ILSKGKHPFGDKYSRESNIIRGIFSLD-EMKCLHDRSLIAEATDLISQMIDHDPLKRPTA 290
Query: 628 EDVLDHP 634
VL HP
Sbjct: 291 MKVLRHP 297
>pdb|3GEN|A Chain A, The 1.6 A Crystal Structure Of Human Bruton's Tyrosine
Kinase Bound To A Pyrrolopyrimidine-Containing Compound
Length = 283
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 58/206 (28%), Positives = 103/206 (50%), Gaps = 15/206 (7%)
Query: 385 IGDGNFAVVRQVYDKHK-DMDCALKIIDKSKLLGKKQMIENEVNILRSVNHPNIIKLLDE 443
+G G F VV+ Y K + D A+K+I K + + + IE E ++ +++H +++L
Sbjct: 32 LGTGQFGVVK--YGKWRGQYDVAIKMI-KEGSMSEDEFIE-EAKVMMNLSHEKLVQLYGV 87
Query: 444 YDTNNELYLVIELIKGGDLFDAISK-NVKFSEEDSKFMTQSLASALSYLHDNYIVHRDIK 502
++++ E + G L + + + +F + M + + A+ YL +HRD+
Sbjct: 88 CTKQRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYLESKQFLHRDLA 147
Query: 503 PENLLVEMSGCHVKVLKVGDFGLAQRVLRPMFT-VCGTP---TYVAPEILNESGYGVKID 558
N LV G V+KV DFGL++ VL +T G+ + PE+L S + K D
Sbjct: 148 ARNCLVNDQG----VVKVSDFGLSRYVLDDEYTSSVGSKFPVRWSPPEVLMYSKFSSKSD 203
Query: 559 VWAAGVILY-ILLCGFPPFVSDTNDQ 583
+WA GV+++ I G P+ TN +
Sbjct: 204 IWAFGVLMWEIYSLGKMPYERFTNSE 229
>pdb|4G3D|A Chain A, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|B Chain B, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|D Chain D, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|E Chain E, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
Length = 371
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 50/199 (25%), Positives = 91/199 (45%), Gaps = 13/199 (6%)
Query: 385 IGDGNFAVVRQVYDKHKDMDCALKIIDKSKLLGKKQMIENEVNILRSVNHPNIIKLLDEY 444
+G G+F V ++ DK CA+K K +L + E+ + P I+ L
Sbjct: 101 LGRGSFGEVHRMEDKQTGFQCAVK---KVRL---EVFRAEELMACAGLTSPRIVPLYGAV 154
Query: 445 DTNNELYLVIELIKGGDLFDAISKNVKFSEEDSKFMTQSLASALSYLHDNYIVHRDIKPE 504
+ + +EL++GG L + + E+ + + L YLH I+H D+K +
Sbjct: 155 REGPWVNIFMELLEGGSLGQLVKEQGCLPEDRALYYLGQALEGLEYLHSRRILHGDVKAD 214
Query: 505 NLLVEMSGCHVKVLKVGDF------GLAQRVLRPMFTVCGTPTYVAPEILNESGYGVKID 558
N+L+ G H + G GL + +L + + GT T++APE++ K+D
Sbjct: 215 NVLLSSDGSHAALCDFGHAVCLQPDGLGKSLLTGDY-IPGTETHMAPEVVLGRSCDAKVD 273
Query: 559 VWAAGVILYILLCGFPPFV 577
VW++ ++ +L G P+
Sbjct: 274 VWSSCCMMLHMLNGCHPWT 292
>pdb|3PIX|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Isopropyl-7-
(4-Methyl-Piperazin-1-Yl)-4-(5-Methyl-2h-Pyrazol-3-
Ylamino)-2h- Phthalazin-1-One
pdb|3PIY|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With R406
pdb|3PIZ|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
(5-Amino-1-O-
Tolyl-1h-Pyrazol-4-Yl)-[3-(1-Methanesulfonyl-Piperidin-
4-Yl)-Phenyl]- Methanone
pdb|3PJ1|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
3-(2,6-Dichloro-
Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-Phenylamino]-1-
Methyl-3,4- Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3PJ2|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-[4-(2-
Diethylamino-Ethoxy)-Phenylamino]-6-(4-Fluoro-Phenoxy)-
8-Methyl-8h- Pyrido[2,3-D]pyrimidin-7-One
pdb|3PJ3|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Methyl-5-[(E)-
(3-Phenyl-Acryloyl)amino]-N-(2-Phenyl-3h-Imidazo[4,
5-B]pyridin-6-Yl)- Benzamide
Length = 274
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 58/206 (28%), Positives = 103/206 (50%), Gaps = 15/206 (7%)
Query: 385 IGDGNFAVVRQVYDKHK-DMDCALKIIDKSKLLGKKQMIENEVNILRSVNHPNIIKLLDE 443
+G G F VV+ Y K + D A+K+I K + + + IE E ++ +++H +++L
Sbjct: 23 LGTGQFGVVK--YGKWRGQYDVAIKMI-KEGSMSEDEFIE-EAKVMMNLSHEKLVQLYGV 78
Query: 444 YDTNNELYLVIELIKGGDLFDAISK-NVKFSEEDSKFMTQSLASALSYLHDNYIVHRDIK 502
++++ E + G L + + + +F + M + + A+ YL +HRD+
Sbjct: 79 CTKQRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYLESKQFLHRDLA 138
Query: 503 PENLLVEMSGCHVKVLKVGDFGLAQRVLRPMFT-VCGTP---TYVAPEILNESGYGVKID 558
N LV G V+KV DFGL++ VL +T G+ + PE+L S + K D
Sbjct: 139 ARNCLVNDQG----VVKVSDFGLSRYVLDDEYTSSVGSKFPVRWSPPEVLMYSKFSSKSD 194
Query: 559 VWAAGVILY-ILLCGFPPFVSDTNDQ 583
+WA GV+++ I G P+ TN +
Sbjct: 195 IWAFGVLMWEIYSLGKMPYERFTNSE 220
>pdb|3OCS|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase In Complex
With Inhibitor Cgi1746
Length = 271
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 58/206 (28%), Positives = 103/206 (50%), Gaps = 15/206 (7%)
Query: 385 IGDGNFAVVRQVYDKHK-DMDCALKIIDKSKLLGKKQMIENEVNILRSVNHPNIIKLLDE 443
+G G F VV+ Y K + D A+K+I K + + + IE E ++ +++H +++L
Sbjct: 17 LGTGQFGVVK--YGKWRGQYDVAIKMI-KEGSMSEDEFIE-EAKVMMNLSHEKLVQLYGV 72
Query: 444 YDTNNELYLVIELIKGGDLFDAISK-NVKFSEEDSKFMTQSLASALSYLHDNYIVHRDIK 502
++++ E + G L + + + +F + M + + A+ YL +HRD+
Sbjct: 73 CTKQRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYLESKQFLHRDLA 132
Query: 503 PENLLVEMSGCHVKVLKVGDFGLAQRVLRPMFT-VCGTP---TYVAPEILNESGYGVKID 558
N LV G V+KV DFGL++ VL +T G+ + PE+L S + K D
Sbjct: 133 ARNCLVNDQG----VVKVSDFGLSRYVLDDEYTSSVGSKFPVRWSPPEVLMYSKFSSKSD 188
Query: 559 VWAAGVILY-ILLCGFPPFVSDTNDQ 583
+WA GV+++ I G P+ TN +
Sbjct: 189 IWAFGVLMWEIYSLGKMPYERFTNSE 214
>pdb|3QD2|B Chain B, Crsytal Structure Of Mouse Perk Kinase Domain
Length = 332
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 78/340 (22%), Positives = 135/340 (39%), Gaps = 86/340 (25%)
Query: 373 SKLLQRYSVGQIIGDGNFAVVRQVYDKHKDMDCALKIIDKSKLLGKKQMIENEVNILRSV 432
S+ L + Q +G G F VV + +K D + A+K I ++ + EV L +
Sbjct: 2 SRYLTDFEPIQCMGRGGFGVVFEAKNKVDDCNYAIKRIRLPNRELAREKVMREVKALAKL 61
Query: 433 NHPNI---------------------------------------------IKLLDEYDTN 447
HP I I+ +D + T
Sbjct: 62 EHPGIVRYFNAWLETPPEKWQEEMDEIWLKDESTDWPLSSPSPMDAPSVKIRRMDPFSTK 121
Query: 448 NE------------LYLVIELIKGGDLFDAISKNVKFSEEDSKFMTQ---SLASALSYLH 492
N LY+ ++L + +L D +++ + + +A A+ +LH
Sbjct: 122 NTVGQLQPSSPKVYLYIQMQLCRKENLKDWMNRRCSLEDREHGVCLHIFIQIAEAVEFLH 181
Query: 493 DNYIVHRDIKPENLLVEMSGCHVKVLKVGDFGLA---------QRVLRPMFTVC------ 537
++HRD+KP N+ M V+KVGDFGL Q VL PM
Sbjct: 182 SKGLMHRDLKPSNIFFTMDD----VVKVGDFGLVTAMDQDEEEQTVLTPMPAYATHXGQV 237
Query: 538 GTPTYVAPEILNESGYGVKIDVWAAGVILYILLCGFPPFVSDTNDQDELFDDILSGQYGF 597
GT Y++PE ++ + Y K+D+++ G+IL+ LL F S ++ + D+ + F
Sbjct: 238 GTKLYMSPEQIHGNNYSHKVDIFSLGLILFELLYSF----STQMERVRIITDVRN--LKF 291
Query: 598 PSPYWDDISEEAKELISHMLESNPDLRFSAEDVLDHPWLE 637
P + +E ++ ML +P R A D++++ E
Sbjct: 292 PLLFTQKYPQEHM-MVQDMLSPSPTERPEATDIIENAIFE 330
>pdb|4EC8|A Chain A, Structure Of Full Length Cdk9 In Complex With Cyclint And
Drb
pdb|4EC9|A Chain A, Crystal Structure Of Full-Length Cdk9 In Complex With
Cyclin T
Length = 373
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 84/305 (27%), Positives = 130/305 (42%), Gaps = 73/305 (23%)
Query: 385 IGDGNFAVVRQVYDKHKDMDCALK-IIDKSKLLGKKQMIENEVNILRSVNHPNIIKLLDE 443
IG G F V + + ALK ++ +++ G E+ IL+ + H N++ L++
Sbjct: 26 IGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEI 85
Query: 444 YDTN--------NELYLVIELIKGGDLFDAISKN-VKFSEEDSKFMTQSLASALSYLHDN 494
T +YLV + + DL +S VKF+ + K + Q L + L Y+H N
Sbjct: 86 CRTKASPYNRCKGSIYLVFDFCEH-DLAGLLSNVLVKFTLSEIKRVMQMLLNGLYYIHRN 144
Query: 495 YIVHRDIKPENLLVEMSGCHVKVLKVGDFGLAQRVLRPMFTVCG------------TPTY 542
I+HRD+K N+L+ G VLK+ DFGLA+ F++ T Y
Sbjct: 145 KILHRDMKAANVLITRDG----VLKLADFGLAR-----AFSLAKNSQPNRYXNRVVTLWY 195
Query: 543 VAPE-ILNESGYGVKIDVWAAGVILYIL---------------------LCG-FPPFVSD 579
PE +L E YG ID+W AG I+ + LCG P V
Sbjct: 196 RPPELLLGERDYGPPIDLWGAGCIMAEMWTRSPIMQGNTEQHQLALISQLCGSITPEVWP 255
Query: 580 TNDQDELFD--DILSGQYG---------FPSPYWDDISEEAKELISHMLESNPDLRFSAE 628
D EL++ +++ GQ PY A +LI +L +P R ++
Sbjct: 256 NVDNYELYEKLELVKGQKRKVKDRLKAYVRDPY-------ALDLIDKLLVLDPAQRIDSD 308
Query: 629 DVLDH 633
D L+H
Sbjct: 309 DALNH 313
>pdb|3RGF|A Chain A, Crystal Structure Of Human Cdk8CYCC
Length = 405
Score = 74.7 bits (182), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 62/209 (29%), Positives = 96/209 (45%), Gaps = 28/209 (13%)
Query: 425 EVNILRSVNHPNIIKLLDEY--DTNNELYLVIE--------LIKGGDLFDAISKNVKFSE 474
E+ +LR + HPN+I L + + +++L+ + +IK A K V+
Sbjct: 68 EIALLRELKHPNVISLQKVFLSHADRKVWLLFDYAEHDLWHIIKFHRASKANKKPVQLPR 127
Query: 475 EDSKFMTQSLASALSYLHDNYIVHRDIKPENLLVEMSGCHVKVLKVGDFGLAQRV---LR 531
K + + + YLH N+++HRD+KP N+LV G +K+ D G A+ L+
Sbjct: 128 GMVKSLLYQILDGIHYLHANWVLHRDLKPANILVMGEGPERGRVKIADMGFARLFNSPLK 187
Query: 532 PMF---TVCGTPTYVAPE-ILNESGYGVKIDVWAAGVILYILLCGFPPF--------VSD 579
P+ V T Y APE +L Y ID+WA G I LL P F S+
Sbjct: 188 PLADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCRQEDIKTSN 247
Query: 580 TNDQDELFDDILSGQYGFPSPY-WDDISE 607
D+L D + GFP+ W+DI +
Sbjct: 248 PYHHDQL--DRIFNVMGFPADKDWEDIKK 274
>pdb|3MI9|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Human P-Tefb
pdb|3MIA|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Atp-Bound
Human P-Tefb
Length = 351
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 84/305 (27%), Positives = 130/305 (42%), Gaps = 73/305 (23%)
Query: 385 IGDGNFAVVRQVYDKHKDMDCALK-IIDKSKLLGKKQMIENEVNILRSVNHPNIIKLLDE 443
IG G F V + + ALK ++ +++ G E+ IL+ + H N++ L++
Sbjct: 25 IGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEI 84
Query: 444 YDTN--------NELYLVIELIKGGDLFDAISKN-VKFSEEDSKFMTQSLASALSYLHDN 494
T +YLV + + DL +S VKF+ + K + Q L + L Y+H N
Sbjct: 85 CRTKASPYNRCKGSIYLVFDFCEH-DLAGLLSNVLVKFTLSEIKRVMQMLLNGLYYIHRN 143
Query: 495 YIVHRDIKPENLLVEMSGCHVKVLKVGDFGLAQRVLRPMFTVCG------------TPTY 542
I+HRD+K N+L+ G VLK+ DFGLA+ F++ T Y
Sbjct: 144 KILHRDMKAANVLITRDG----VLKLADFGLAR-----AFSLAKNSQPNRYXNRVVTLWY 194
Query: 543 VAPE-ILNESGYGVKIDVWAAGVILYIL---------------------LCG-FPPFVSD 579
PE +L E YG ID+W AG I+ + LCG P V
Sbjct: 195 RPPELLLGERDYGPPIDLWGAGCIMAEMWTRSPIMQGNTEQHQLALISQLCGSITPEVWP 254
Query: 580 TNDQDELFD--DILSGQYG---------FPSPYWDDISEEAKELISHMLESNPDLRFSAE 628
D EL++ +++ GQ PY A +LI +L +P R ++
Sbjct: 255 NVDNYELYEKLELVKGQKRKVKDRLKAYVRDPY-------ALDLIDKLLVLDPAQRIDSD 307
Query: 629 DVLDH 633
D L+H
Sbjct: 308 DALNH 312
>pdb|4DN5|A Chain A, Crystal Structure Of Nf-kb-inducing Kinase (nik)
pdb|4DN5|B Chain B, Crystal Structure Of Nf-kb-inducing Kinase (nik)
Length = 356
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 50/199 (25%), Positives = 91/199 (45%), Gaps = 13/199 (6%)
Query: 385 IGDGNFAVVRQVYDKHKDMDCALKIIDKSKLLGKKQMIENEVNILRSVNHPNIIKLLDEY 444
+G G+F V ++ DK CA+K K +L + E+ + P I+ L
Sbjct: 82 LGRGSFGEVHRMEDKQTGFQCAVK---KVRL---EVFRAEELMACAGLTSPRIVPLYGAV 135
Query: 445 DTNNELYLVIELIKGGDLFDAISKNVKFSEEDSKFMTQSLASALSYLHDNYIVHRDIKPE 504
+ + +EL++GG L + + E+ + + L YLH I+H D+K +
Sbjct: 136 REGPWVNIFMELLEGGSLGQLVKEQGCLPEDRALYYLGQALEGLEYLHSRRILHGDVKAD 195
Query: 505 NLLVEMSGCHVKVLKVGDF------GLAQRVLRPMFTVCGTPTYVAPEILNESGYGVKID 558
N+L+ G H + G GL + +L + + GT T++APE++ K+D
Sbjct: 196 NVLLSSDGSHAALCDFGHAVCLQPDGLGKDLLTGDY-IPGTETHMAPEVVLGRSCDAKVD 254
Query: 559 VWAAGVILYILLCGFPPFV 577
VW++ ++ +L G P+
Sbjct: 255 VWSSCCMMLHMLNGCHPWT 273
>pdb|4F1O|A Chain A, Crystal Structure Of The L1180t Mutant Roco4 Kinase Domain
From D. Discoideum Bound To Appcp
Length = 287
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 60/204 (29%), Positives = 104/204 (50%), Gaps = 14/204 (6%)
Query: 385 IGDGNFAVV---RQVYDKHKDMDCALKIID---KSKLLGKKQMIENEVNILRSVNHPNII 438
IG G F +V R V DK +L + D +++++ K Q + EV I+ ++NHPNI+
Sbjct: 27 IGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFIMSNLNHPNIV 86
Query: 439 KLLDEYDTNNELYLVIELIKGGDLFDAI---SKNVKFSEEDSKFMTQSLASALSYLHDNY 495
KL +N +V+E + GDL+ + + +K+S + + +L +
Sbjct: 87 KLYGL--MHNPPRMVMEFVPCGDLYHRLLDKAHPIKWSVKLRLMLDIALGIEYMQNQNPP 144
Query: 496 IVHRDIKPENLLVEMSGCHVKVL-KVGDFGLAQRVLRPMFTVCGTPTYVAPEILN--ESG 552
IVHRD++ N+ ++ + V KV DFG +Q+ + + + G ++APE + E
Sbjct: 145 IVHRDLRSPNIFLQSLDENAPVCAKVADFGTSQQSVHSVSGLLGNFQWMAPETIGAEEES 204
Query: 553 YGVKIDVWAAGVILYILLCGFPPF 576
Y K D ++ +ILY +L G PF
Sbjct: 205 YTEKADTYSFAMILYTILTGEGPF 228
>pdb|2OIB|A Chain A, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|B Chain B, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|C Chain C, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|D Chain D, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIC|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OID|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
Length = 301
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 59/207 (28%), Positives = 98/207 (47%), Gaps = 24/207 (11%)
Query: 382 GQIIGDGNFAVVRQVYDKHKDMD----CALKIIDKSKLLGKKQMIENEVNILRSVNHPNI 437
G +G+G F VV + Y + + A+ I +L KQ + E+ ++ H N+
Sbjct: 30 GNKMGEGGFGVVYKGYVNNTTVAVKKLAAMVDITTEEL---KQQFDQEIKVMAKCQHENL 86
Query: 438 IKLLDEYDTNNELYLVIELIKGGDLFDAIS---KNVKFSEEDSKFMTQSLASALSYLHDN 494
++LL ++L LV + G L D +S S + Q A+ +++LH+N
Sbjct: 87 VELLGFSSDGDDLCLVYVYMPNGSLLDRLSCLDGTPPLSWHMRCKIAQGAANGINFLHEN 146
Query: 495 YIVHRDIKPENLLVEMSGCHVKVLKVGDFGL-------AQRVLRPMFTVCGTPTYVAPEI 547
+ +HRDIK N+L++ K+ DFGL AQ V+ + GT Y+APE
Sbjct: 147 HHIHRDIKSANILLD----EAFTAKISDFGLARASEKFAQXVMXX--RIVGTTAYMAPEA 200
Query: 548 LNESGYGVKIDVWAAGVILYILLCGFP 574
L K D+++ GV+L ++ G P
Sbjct: 201 L-RGEITPKSDIYSFGVVLLEIITGLP 226
>pdb|3BLH|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1
pdb|3BLQ|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
ATP
pdb|3BLR|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
Flavopiridol
pdb|3MY1|A Chain A, Structure Of Cdk9CYCLINT1 IN COMPLEX WITH DRB
pdb|3LQ5|A Chain A, Structure Of Cdk9CYCLINT IN COMPLEX WITH S-Cr8
pdb|3TN8|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNH|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNI|A Chain A, Structure Of Cdk9CYCLIN T F241L
pdb|4BCH|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCI|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCJ|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 84/305 (27%), Positives = 130/305 (42%), Gaps = 73/305 (23%)
Query: 385 IGDGNFAVVRQVYDKHKDMDCALK-IIDKSKLLGKKQMIENEVNILRSVNHPNIIKLLDE 443
IG G F V + + ALK ++ +++ G E+ IL+ + H N++ L++
Sbjct: 26 IGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEI 85
Query: 444 YDTN--------NELYLVIELIKGGDLFDAISKN-VKFSEEDSKFMTQSLASALSYLHDN 494
T +YLV + + DL +S VKF+ + K + Q L + L Y+H N
Sbjct: 86 CRTKASPYNRCKGSIYLVFDFCEH-DLAGLLSNVLVKFTLSEIKRVMQMLLNGLYYIHRN 144
Query: 495 YIVHRDIKPENLLVEMSGCHVKVLKVGDFGLAQRVLRPMFTVCG------------TPTY 542
I+HRD+K N+L+ G VLK+ DFGLA+ F++ T Y
Sbjct: 145 KILHRDMKAANVLITRDG----VLKLADFGLAR-----AFSLAKNSQPNRYXNRVVTLWY 195
Query: 543 VAPE-ILNESGYGVKIDVWAAGVILYIL---------------------LCG-FPPFVSD 579
PE +L E YG ID+W AG I+ + LCG P V
Sbjct: 196 RPPELLLGERDYGPPIDLWGAGCIMAEMWTRSPIMQGNTEQHQLALISQLCGSITPEVWP 255
Query: 580 TNDQDELFD--DILSGQYG---------FPSPYWDDISEEAKELISHMLESNPDLRFSAE 628
D EL++ +++ GQ PY A +LI +L +P R ++
Sbjct: 256 NVDNYELYEKLELVKGQKRKVKDRLKAYVRDPY-------ALDLIDKLLVLDPAQRIDSD 308
Query: 629 DVLDH 633
D L+H
Sbjct: 309 DALNH 313
>pdb|2WQB|A Chain A, Structure Of The Tie2 Kinase Domain In Complex With A
Thiazolopyrimidine Inhibitor
Length = 324
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 78/271 (28%), Positives = 122/271 (45%), Gaps = 33/271 (12%)
Query: 384 IIGDGNFAVVRQVYDKHKD---MDCALKIIDKSKLLGKKQMIENEVNILRSV-NHPNIIK 439
+IG+GNF V + K KD MD A+K + + + E+ +L + +HPNII
Sbjct: 29 VIGEGNFGQVLKARIK-KDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIIN 87
Query: 440 LLDEYDTNNELYLVIELIKGGDLFDAISKNVKFSEEDSKFMTQSLASALS---------- 489
LL + LYL IE G+L D + K+ + + + S AS LS
Sbjct: 88 LLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAAD 147
Query: 490 ------YLHDNYIVHRDIKPENLLVEMSGCHVKVLKVGDFGLAQ-RVLRPMFTVCGTPT- 541
YL +HR++ N+LV + V K+ DFGL++ + + T+ P
Sbjct: 148 VARGMDYLSQKQFIHRNLAARNILVGEN----YVAKIADFGLSRGQEVYVKKTMGRLPVR 203
Query: 542 YVAPEILNESGYGVKIDVWAAGVILY-ILLCGFPPFVSDTNDQDELFDDILSGQYGFPSP 600
++A E LN S Y DVW+ GV+L+ I+ G P+ T EL++ + G Y P
Sbjct: 204 WMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTC--AELYEKLPQG-YRLEKP 260
Query: 601 YWDDISEEAKELISHMLESNPDLRFSAEDVL 631
+ +E +L+ P R S +L
Sbjct: 261 L--NCDDEVYDLMRQCWREKPYERPSFAQIL 289
>pdb|3K54|A Chain A, Structures Of Human Bruton's Tyrosine Kinase In Active And
Inactive Conformations Suggests A Mechanism Of
Activation For Tec Family Kinases
Length = 283
Score = 73.9 bits (180), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 59/210 (28%), Positives = 102/210 (48%), Gaps = 23/210 (10%)
Query: 385 IGDGNFAVVRQVYDKHK-DMDCALKIIDKSKLLGKKQMIENEVNILRSVNHPNIIKLLDE 443
+G G F VV+ Y K + D A+K+I K + + + IE E ++ +++H +++L
Sbjct: 32 LGTGQFGVVK--YGKWRGQYDVAIKMI-KEGSMSEDEFIE-EAKVMMNLSHEKLVQLYGV 87
Query: 444 YDTNNELYLVIELIKGGDLFDAISK-NVKFSEEDSKFMTQSLASALSYLHDNYIVHRDIK 502
++++ E + G L + + + +F + M + + A+ YL +HRD+
Sbjct: 88 CTKQRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYLESKQFLHRDLA 147
Query: 503 PENLLVEMSGCHVKVLKVGDFGLAQRVL--------RPMFTVCGTPTYVAPEILNESGYG 554
N LV G V+KV DFGL++ VL F V +P PE+L S +
Sbjct: 148 ARNCLVNDQG----VVKVSDFGLSRYVLDDEETSSVGSKFPVRWSP----PEVLMYSKFS 199
Query: 555 VKIDVWAAGVILY-ILLCGFPPFVSDTNDQ 583
K D+WA GV+++ I G P+ TN +
Sbjct: 200 SKSDIWAFGVLMWEIYSLGKMPYERFTNSE 229
>pdb|4F1M|A Chain A, Crystal Structure Of The G1179s Roco4 Kinase Domain Bound
To Appcp From D. Discoideum
Length = 287
Score = 73.9 bits (180), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 60/204 (29%), Positives = 104/204 (50%), Gaps = 14/204 (6%)
Query: 385 IGDGNFAVV---RQVYDKHKDMDCALKIID---KSKLLGKKQMIENEVNILRSVNHPNII 438
IG G F +V R V DK +L + D +++++ K Q + EV I+ ++NHPNI+
Sbjct: 27 IGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFIMSNLNHPNIV 86
Query: 439 KLLDEYDTNNELYLVIELIKGGDLFDAI---SKNVKFSEEDSKFMTQSLASALSYLHDNY 495
KL +N +V+E + GDL+ + + +K+S + + +L +
Sbjct: 87 KLYGL--MHNPPRMVMEFVPCGDLYHRLLDKAHPIKWSVKLRLMLDIALGIEYMQNQNPP 144
Query: 496 IVHRDIKPENLLVEMSGCHVKVL-KVGDFGLAQRVLRPMFTVCGTPTYVAPEILN--ESG 552
IVHRD++ N+ ++ + V KV DF L+Q+ + + + G ++APE + E
Sbjct: 145 IVHRDLRSPNIFLQSLDENAPVCAKVADFSLSQQSVHSVSGLLGNFQWMAPETIGAEEES 204
Query: 553 YGVKIDVWAAGVILYILLCGFPPF 576
Y K D ++ +ILY +L G PF
Sbjct: 205 YTEKADTYSFAMILYTILTGEGPF 228
>pdb|4BCF|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 84/305 (27%), Positives = 130/305 (42%), Gaps = 73/305 (23%)
Query: 385 IGDGNFAVVRQVYDKHKDMDCALK-IIDKSKLLGKKQMIENEVNILRSVNHPNIIKLLDE 443
IG G F V + + ALK ++ +++ G E+ IL+ + H N++ L++
Sbjct: 26 IGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEI 85
Query: 444 YDTNNE--------LYLVIELIKGGDLFDAISKN-VKFSEEDSKFMTQSLASALSYLHDN 494
T +YLV + + DL +S VKF+ + K + Q L + L Y+H N
Sbjct: 86 CRTKASPYNRCKASIYLVFDFCEH-DLAGLLSNVLVKFTLSEIKRVMQMLLNGLYYIHRN 144
Query: 495 YIVHRDIKPENLLVEMSGCHVKVLKVGDFGLAQRVLRPMFTVCG------------TPTY 542
I+HRD+K N+L+ G VLK+ DFGLA+ F++ T Y
Sbjct: 145 KILHRDMKAANVLITRDG----VLKLADFGLAR-----AFSLAKNSQPNRYXNRVVTLWY 195
Query: 543 VAPE-ILNESGYGVKIDVWAAGVILYIL---------------------LCG-FPPFVSD 579
PE +L E YG ID+W AG I+ + LCG P V
Sbjct: 196 RPPELLLGERDYGPPIDLWGAGCIMAEMWTRSPIMQGNTEQHQLALISQLCGSITPEVWP 255
Query: 580 TNDQDELFD--DILSGQYG---------FPSPYWDDISEEAKELISHMLESNPDLRFSAE 628
D EL++ +++ GQ PY A +LI +L +P R ++
Sbjct: 256 NVDNYELYEKLELVKGQKRKVKDRLKAYVRDPY-------ALDLIDKLLVLDPAQRIDSD 308
Query: 629 DVLDH 633
D L+H
Sbjct: 309 DALNH 313
>pdb|3FZO|A Chain A, Crystal Structure Of Pyk2-Apo, Proline-Rich Tyrosine
Kinase
pdb|3FZP|A Chain A, Crystal Structure Of Pyk2 Complexed With Atpgs
pdb|3FZR|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-431396
pdb|3FZS|A Chain A, Crystal Structure Of Pyk2 Complexed With Birb796
pdb|3FZT|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-4618433
pdb|3H3C|A Chain A, Crystal Structure Of Pyk2 In Complex With Sulfoximine-
Substituted Trifluoromethylpyrimidine Analog
pdb|3ET7|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-2318841
Length = 277
Score = 72.8 bits (177), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 62/209 (29%), Positives = 107/209 (51%), Gaps = 22/209 (10%)
Query: 381 VGQIIGDGNFAVVRQ-VYDKHK--DMDCALKIIDKSKLLGKKQMIENEVNILRSVNHPNI 437
+ +I+G+G F V + VY HK ++ A+K K L K+ +E I+++++HP+I
Sbjct: 12 LNRILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMKNLDHPHI 71
Query: 438 IKLLDEYDTNNELYLVIELIKGGDLFDAISKNVKFSEEDSKFMTQSLAS-----ALSYLH 492
+KL+ + ++++EL G+L + +N + K +T L S A++YL
Sbjct: 72 VKLIGIIE-EEPTWIIMELYPYGELGHYLERN----KNSLKVLTLVLYSLQICKAMAYLE 126
Query: 493 DNYIVHRDIKPENLLVEMSGCHVKVLKVGDFGLAQRVLRPMF---TVCGTPT-YVAPEIL 548
VHRDI N+LV C +K+GDFGL++ + + +V P +++PE +
Sbjct: 127 SINCVHRDIAVRNILVASPEC----VKLGDFGLSRYIEDEDYYKASVTRLPIKWMSPESI 182
Query: 549 NESGYGVKIDVWAAGVILY-ILLCGFPPF 576
N + DVW V ++ IL G PF
Sbjct: 183 NFRRFTTASDVWMFAVCMWEILSFGKQPF 211
>pdb|4H1J|A Chain A, Crystal Structure Of Pyk2 With The Pyrazole 13a
pdb|4H1M|A Chain A, Crystal Structure Of Pyk2 With The Indole 10c
Length = 293
Score = 72.8 bits (177), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 62/209 (29%), Positives = 107/209 (51%), Gaps = 22/209 (10%)
Query: 381 VGQIIGDGNFAVVRQ-VYDKHK--DMDCALKIIDKSKLLGKKQMIENEVNILRSVNHPNI 437
+ +I+G+G F V + VY HK ++ A+K K L K+ +E I+++++HP+I
Sbjct: 28 LNRILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMKNLDHPHI 87
Query: 438 IKLLDEYDTNNELYLVIELIKGGDLFDAISKNVKFSEEDSKFMTQSLAS-----ALSYLH 492
+KL+ + ++++EL G+L + +N + K +T L S A++YL
Sbjct: 88 VKLIGIIE-EEPTWIIMELYPYGELGHYLERN----KNSLKVLTLVLYSLQICKAMAYLE 142
Query: 493 DNYIVHRDIKPENLLVEMSGCHVKVLKVGDFGLAQRVLRPMF---TVCGTPT-YVAPEIL 548
VHRDI N+LV C +K+GDFGL++ + + +V P +++PE +
Sbjct: 143 SINCVHRDIAVRNILVASPEC----VKLGDFGLSRYIEDEDYYKASVTRLPIKWMSPESI 198
Query: 549 NESGYGVKIDVWAAGVILY-ILLCGFPPF 576
N + DVW V ++ IL G PF
Sbjct: 199 NFRRFTTASDVWMFAVCMWEILSFGKQPF 227
>pdb|1Z57|A Chain A, Crystal Structure Of Human Clk1 In Complex With
10z-Hymenialdisine
Length = 339
Score = 72.8 bits (177), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 79/325 (24%), Positives = 133/325 (40%), Gaps = 65/325 (20%)
Query: 375 LLQRYSVGQIIGDGNFAVVRQVYD-KHKDMDCALKIIDKSKLLGKKQMIENEVNILRSVN 433
L RY + +G+G F V + D K A+KI+ + +E+ +L +N
Sbjct: 12 LSARYEIVDTLGEGAFGKVVECIDHKAGGRHVAVKIVKNVDRYC--EAARSEIQVLEHLN 69
Query: 434 --HPN----IIKLLDEYDTNNELYLVIELIKGGDLFDAISKN--VKFSEEDSKFMTQSLA 485
PN +++L+ ++ + + +V EL+ G +D I +N + F + + M +
Sbjct: 70 TTDPNSTFRCVQMLEWFEHHGHICIVFELL-GLSTYDFIKENGFLPFRLDHIRKMAYQIC 128
Query: 486 SALSYLHDNYIVHRDIKPENLLVEMS----GCHVKV-----------LKVGDFGLAQRVL 530
++++LH N + H D+KPEN+L S + K+ +KV DFG A
Sbjct: 129 KSVNFLHSNKLTHTDLKPENILFVQSDYTEAYNPKIKRDERTLINPDIKVVDFGSATYDD 188
Query: 531 RPMFTVCGTPTYVAPEILNESGYGVKIDVWAAGVILYILLCGFPPF-VSDTNDQDELFDD 589
T+ T Y APE++ G+ DVW+ G IL GF F D+ + + +
Sbjct: 189 EHHSTLVSTRHYRAPEVILALGWSQPCDVWSIGCILIEYYLGFTVFPTHDSKEHLAMMER 248
Query: 590 ILSG------QYGFPSPY-------WDDISEEAK------------------------EL 612
IL Q Y WD+ S + +L
Sbjct: 249 ILGPLPKHMIQKTRKRKYFHHDRLDWDEHSSAGRYVSRACKPLKEFMLSQDVEHERLFDL 308
Query: 613 ISHMLESNPDLRFSAEDVLDHPWLE 637
I MLE +P R + + L HP+ +
Sbjct: 309 IQKMLEYDPAKRITLREALKHPFFD 333
>pdb|3E3P|A Chain A, Glycogen Synthase Kinase From Leishmania Major
pdb|3E3P|B Chain B, Glycogen Synthase Kinase From Leishmania Major
Length = 360
Score = 72.4 bits (176), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 77/311 (24%), Positives = 129/311 (41%), Gaps = 58/311 (18%)
Query: 374 KLLQRYSVGQIIGDGNFAVVRQVYDKHKDMDCALK-IIDKSKLLGKKQMIENEVNILRSV 432
K + R+ V ++ G G F V+ +K M A+K +I + ++ I ++ +L
Sbjct: 20 KEMDRFQVERMAGQGTFGTVQLGKEKSTGMSVAIKKVIQDPRFRNRELQIMQDLAVL--- 76
Query: 433 NHPNIIKLLDEYDTNNE-----LYLVIELIKGGDLFDAISKNVKFSEEDS-----KFMTQ 482
+HPNI++L + T E +YL + + D +N + K
Sbjct: 77 HHPNIVQLQSYFYTLGERDRRDIYLNVVMEYVPDTLHRCCRNYYRRQVAPPPILIKVFLF 136
Query: 483 SLASALSYLH--DNYIVHRDIKPENLLV-EMSGCHVKVLKVGDFGLAQRV--LRPMFTVC 537
L ++ LH + HRDIKP N+LV E G LK+ DFG A+++ P
Sbjct: 137 QLIRSIGCLHLPSVNVCHRDIKPHNVLVNEADG----TLKLCDFGSAKKLSPSEPNVAYI 192
Query: 538 GTPTYVAPE-ILNESGYGVKIDVWAAGVILYILLCGFPPFVSDTNDQDELFDDI------ 590
+ Y APE I Y +D+W+ G I ++ G P F D N +L + +
Sbjct: 193 CSRYYRAPELIFGNQHYTTAVDIWSVGCIFAEMMLGEPIFRGD-NSAGQLHEIVRVLGCP 251
Query: 591 ----------------LSGQYGFPSPYWDDI--------SEEAKELISHMLESNPDLRFS 626
L G P W ++ ++EA +L+S +L+ P+ R
Sbjct: 252 SREVLRKLNPSHTDVDLYNSKGIP---WSNVFSDHSLKDAKEAYDLLSALLQYLPEERMK 308
Query: 627 AEDVLDHPWLE 637
+ L HP+ +
Sbjct: 309 PYEALCHPYFD 319
>pdb|3SXR|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXR|B Chain B, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXS|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complexed With Pp2
Length = 268
Score = 72.4 bits (176), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 54/205 (26%), Positives = 95/205 (46%), Gaps = 13/205 (6%)
Query: 385 IGDGNFAVVRQVYDKHKDMDCALKIIDKSKLLGKKQMIENEVNILRSVNHPNIIKLLDEY 444
+G G F VV+ K + D A+K+I + + + E + ++HP ++K
Sbjct: 16 LGSGQFGVVKLGKWKGQ-YDVAVKMIKEGSM--SEDEFFQEAQTMMKLSHPKLVKFYGVC 72
Query: 445 DTNNELYLVIELIKGGDLFDAISKNVKFSEEDSKF-MTQSLASALSYLHDNYIVHRDIKP 503
+Y+V E I G L + + + K E M + +++L + +HRD+
Sbjct: 73 SKEYPIYIVTEYISNGCLLNYLRSHGKGLEPSQLLEMCYDVCEGMAFLESHQFIHRDLAA 132
Query: 504 ENLLVEMSGCHVKVLKVGDFGLAQRVLRPMF-TVCGTP---TYVAPEILNESGYGVKIDV 559
N LV+ C +KV DFG+ + VL + + GT + APE+ + Y K DV
Sbjct: 133 RNCLVDRDLC----VKVSDFGMTRYVLDDQYVSSVGTKFPVKWSAPEVFHYFKYSSKSDV 188
Query: 560 WAAGVILY-ILLCGFPPFVSDTNDQ 583
WA G++++ + G P+ TN +
Sbjct: 189 WAFGILMWEVFSLGKMPYDLYTNSE 213
>pdb|3CC6|A Chain A, Crystal Structure Of Kinase Domain Of Protein Tyrosine
Kinase 2 Beta (ptk2b)
Length = 281
Score = 72.4 bits (176), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 62/209 (29%), Positives = 107/209 (51%), Gaps = 22/209 (10%)
Query: 381 VGQIIGDGNFAVVRQ-VYDKHK--DMDCALKIIDKSKLLGKKQMIENEVNILRSVNHPNI 437
+ +I+G+G F V + VY HK ++ A+K K L K+ +E I+++++HP+I
Sbjct: 16 LNRILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMKNLDHPHI 75
Query: 438 IKLLDEYDTNNELYLVIELIKGGDLFDAISKNVKFSEEDSKFMTQSLAS-----ALSYLH 492
+KL+ + ++++EL G+L + +N + K +T L S A++YL
Sbjct: 76 VKLIGIIE-EEPTWIIMELYPYGELGHYLERN----KNSLKVLTLVLYSLQICKAMAYLE 130
Query: 493 DNYIVHRDIKPENLLVEMSGCHVKVLKVGDFGLAQRVLRPMF---TVCGTPT-YVAPEIL 548
VHRDI N+LV C +K+GDFGL++ + + +V P +++PE +
Sbjct: 131 SINCVHRDIAVRNILVASPEC----VKLGDFGLSRYIEDEDYYKASVTRLPIKWMSPESI 186
Query: 549 NESGYGVKIDVWAAGVILY-ILLCGFPPF 576
N + DVW V ++ IL G PF
Sbjct: 187 NFRRFTTASDVWMFAVCMWEILSFGKQPF 215
>pdb|1I44|A Chain A, Crystallographic Studies Of An Activation Loop Mutant Of
The Insulin Receptor Tyrosine Kinase
Length = 306
Score = 72.4 bits (176), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 60/262 (22%), Positives = 119/262 (45%), Gaps = 32/262 (12%)
Query: 385 IGDGNFAVV-----RQVYDKHKDMDCALKIIDKSKLLGKKQMIENEVNILRSVNHPNIIK 439
+G G+F +V R + + A+K +++S L ++ NE ++++ ++++
Sbjct: 25 LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVR 84
Query: 440 LLDEYDTNNELYLVIELIKGGDLFDAISKNVKFSEEDSKF-----------MTQSLASAL 488
LL +V+EL+ GDL + ++++ E++ M +A +
Sbjct: 85 LLGVVSKGQPTLVVMELMAHGDL-KSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGM 143
Query: 489 SYLHDNYIVHRDIKPENLLVEMSGCHVKVLKVGDFGLAQRVLRPMFTVCGTPT-----YV 543
+YL+ VHRD+ N +V H +K+GDFG+ + + + G ++
Sbjct: 144 AYLNAKKFVHRDLAARNCMV----AHDFTVKIGDFGMTRDIYETAYYRKGGKGLLPVRWM 199
Query: 544 APEILNESGYGVKIDVWAAGVILY-ILLCGFPPFVSDTNDQDELFDDILSGQYGFPSPYW 602
APE L + + D+W+ GV+L+ I P+ +N+Q F ++ G Y P
Sbjct: 200 APESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQGLSNEQVLKF--VMDGGY-LDQP-- 254
Query: 603 DDISEEAKELISHMLESNPDLR 624
D+ E +L+ + NP +R
Sbjct: 255 DNCPERVTDLMRMCWQFNPKMR 276
>pdb|3NIE|A Chain A, Crystal Structure Of Pf11_0147
pdb|3NIE|B Chain B, Crystal Structure Of Pf11_0147
Length = 429
Score = 72.0 bits (175), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 90/369 (24%), Positives = 149/369 (40%), Gaps = 105/369 (28%)
Query: 366 RENLNIPSKLLQR------YSVGQIIGDGNFAVVRQVYDKHKDMDCALKIIDK--SKLLG 417
RENL +++ Y + +IG G++ V YDK+ + + A+K +++ L+
Sbjct: 11 RENLYFQGAIIKNVKVPDNYEIKHLIGRGSYGYVYLAYDKNANKNVAIKKVNRMFEDLID 70
Query: 418 KKQMIENEVNILRSVNHPNIIKLLD-----EYDTNNELYLVIELIKGGDLFDAISKNVKF 472
K+++ E+ IL + II+L D + +ELY+V+E I DL +
Sbjct: 71 CKRILR-EITILNRLKSDYIIRLHDLIIPEDLLKFDELYIVLE-IADSDLKKLFKTPIFL 128
Query: 473 SEEDSKFMTQSLASALSYLHDNYIVHRDIKPENLLVEMSGCHVKVLKVGDFGLAQRV--- 529
+E+ K + +L ++H++ I+HRD+KP N L+ C VK+ DFGLA+ +
Sbjct: 129 TEQHVKTILYNLLLGEKFIHESGIIHRDLKPANCLLN-QDCSVKIC---DFGLARTINSD 184
Query: 530 ------------------------LRPMFTV-CGTPTYVAPE-ILNESGYGVKIDVWAAG 563
L+ T T Y APE IL + Y ID+W+ G
Sbjct: 185 KDIHIVNDLEEKEENEEPGPHNKNLKKQLTSHVVTRWYRAPELILLQENYTNSIDIWSTG 244
Query: 564 VILYILL-----------CGFPPF----------------VSDTNDQDELFDDILSGQYG 596
I LL FP F V + +++D+L +I+ G
Sbjct: 245 CIFAELLNMMKSHINNPTNRFPLFPGSSCFPLSPDHNSKKVHEKSNRDQL--NIIFNVIG 302
Query: 597 FP----------------------------SPYWDDISEEAKELISHMLESNPDLRFSAE 628
P S + IS+E +L+ ML N R + +
Sbjct: 303 TPPEEDLKCITKQEVIKYIKLFPTRDGIDLSKKYSSISKEGIDLLESMLRFNAQKRITID 362
Query: 629 DVLDHPWLE 637
L HP+L+
Sbjct: 363 KALSHPYLK 371
>pdb|2QOK|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:s768a Triple Mutant
Length = 373
Score = 72.0 bits (175), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 58/214 (27%), Positives = 102/214 (47%), Gaps = 17/214 (7%)
Query: 380 SVGQIIGDGNFAVV---RQVYDKHKDMDCALKIIDKSKLLGKKQMIENEVNILRSVNHPN 436
S+ +++G G F V R K++ A+K + +++ E +I+ +HPN
Sbjct: 48 SIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPN 107
Query: 437 IIKLLDEYDTNNELYLVIELIKGGDLFDAISK-NVKFSEEDSKFMTQSLASALSYLHDNY 495
II+L + + +V E ++ G L + K + +F+ M + +AS + YL D
Sbjct: 108 IIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYLSDMG 167
Query: 496 IVHRDIKPENLLVEMSGCHVKVLKVGDFGLAQRVL----RPMFTVCGTPT---YVAPEIL 548
VHRD+ N+L+ + V KV DFGLA RVL +T G + +PE +
Sbjct: 168 YVHRDLAARNILINSN----LVCKVSDFGLA-RVLEDDPEAAYTTRGGKIPIRWTSPEAI 222
Query: 549 NESGYGVKIDVWAAGVILY-ILLCGFPPFVSDTN 581
+ DVW+ G++L+ ++ G P+ +N
Sbjct: 223 AYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSN 256
>pdb|1AD5|A Chain A, Src Family Kinase Hck-Amp-Pnp Complex
pdb|1AD5|B Chain B, Src Family Kinase Hck-Amp-Pnp Complex
pdb|2HCK|A Chain A, Src Family Kinase Hck-Quercetin Complex
pdb|2HCK|B Chain B, Src Family Kinase Hck-Quercetin Complex
Length = 438
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 74/294 (25%), Positives = 132/294 (44%), Gaps = 37/294 (12%)
Query: 346 VPKMPTKTSVARCATATIKRRENLNIPSKLLQRYSVGQIIGDGNFA-VVRQVYDKHKDMD 404
VP M +K A RE+L + KL G G F V Y+KH +
Sbjct: 161 VPCMSSKPQKPWEKDAWEIPRESLKLEKKL----------GAGQFGEVWMATYNKHTKV- 209
Query: 405 CALKIIDKSKLLGKKQMIENEVNILRSVNHPNIIKLLDEYDTNNELYLVIELIKGGDLFD 464
A+K + + + E N+++++ H ++KL T +Y++ E + G L D
Sbjct: 210 -AVKTMKPGSM--SVEAFLAEANVMKTLQHDKLVKL-HAVVTKEPIYIITEFMAKGSLLD 265
Query: 465 AISKNVKFSEEDSKFM--TQSLASALSYLHDNYIVHRDIKPENLLVEMSGCHVKVLKVGD 522
+ + + K + + +A ++++ +HRD++ N+LV S V K+ D
Sbjct: 266 FLKSDEGSKQPLPKLIDFSAQIAEGMAFIEQRNYIHRDLRAANILVSAS----LVCKIAD 321
Query: 523 FGLAQRVLRPMFTVCGTPTYVAPEILNESGYGVKIDVWAAGVILY-ILLCGFPPFVSDTN 581
FGLA+ + F + + APE +N + +K DVW+ G++L I+ G P+ +N
Sbjct: 322 FGLAR--VGAKFPI----KWTAPEAINFGSFTIKSDVWSFGILLMEIVTYGRIPYPGMSN 375
Query: 582 DQDELFDDILSGQYGFPSPYWDDISEEAKELISHMLESNPDLRFSAE---DVLD 632
E+ + G Y P P ++ EE ++ ++ P+ R + E VLD
Sbjct: 376 --PEVIRALERG-YRMPRP--ENCPEELYNIMMRCWKNRPEERPTFEYIQSVLD 424
>pdb|3ALN|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|B Chain B, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|C Chain C, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALO|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Ternary Complex With Amp-Pnp And P38 Peptide
pdb|3VUT|A Chain A, Crystal Structures Of Non-Phosphorylated Map2k4
pdb|3VUT|B Chain B, Crystal Structures Of Non-Phosphorylated Map2k4
Length = 327
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 60/209 (28%), Positives = 105/209 (50%), Gaps = 26/209 (12%)
Query: 385 IGDGNFAVVRQVYDKHKDMDCALK----IIDKSKLLGKKQMIENEVNILRSVNHPNIIKL 440
IG G + V ++ K A+K +D+ + +KQ++ + ++RS + P I++
Sbjct: 30 IGRGAYGSVNKMVHKPSGQIMAVKRIRSTVDEKE---QKQLLMDLDVVMRSSDCPYIVQF 86
Query: 441 LDEYDTNNELYLVIELIKGGDLFDAISKNVK------FSEEDSKFMTQSLASALSYLHDN 494
+ ++ +EL+ FD K V EE +T + AL++L +N
Sbjct: 87 YGALFREGDCWICMELMSTS--FDKFYKYVYSVLDDVIPEEILGKITLATVKALNHLKEN 144
Query: 495 Y-IVHRDIKPENLLVEMSGCHVKVLKVGDFGLAQRVLRPMFTV--CGTPTYVAPEILNES 551
I+HRDIKP N+L++ SG +K+ DFG++ +++ + G Y+APE ++ S
Sbjct: 145 LKIIHRDIKPSNILLDRSG----NIKLCDFGISGQLVDSIAKTRDAGCRPYMAPERIDPS 200
Query: 552 ----GYGVKIDVWAAGVILYILLCGFPPF 576
GY V+ DVW+ G+ LY L G P+
Sbjct: 201 ASRQGYDVRSDVWSLGITLYELATGRFPY 229
>pdb|1QCF|A Chain A, Crystal Structure Of Hck In Complex With A Src Family-
Selective Tyrosine Kinase Inhibitor
pdb|2C0I|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0I|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0O|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0O|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0T|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-641359
pdb|2C0T|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-641359
Length = 454
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 71/287 (24%), Positives = 128/287 (44%), Gaps = 32/287 (11%)
Query: 346 VPKMPTKTSVARCATATIKRRENLNIPSKLLQRYSVGQIIGDGNFA-VVRQVYDKHKDMD 404
VP M +K A RE+L + KL G G F V Y+KH +
Sbjct: 167 VPCMSSKPQKPWEKDAWEIPRESLKLEKKL----------GAGQFGEVWMATYNKHTKV- 215
Query: 405 CALKIIDKSKLLGKKQMIENEVNILRSVNHPNIIKLLDEYDTNNELYLVIELIKGGDLFD 464
A+K + + + E N+++++ H ++KL T +Y++ E + G L D
Sbjct: 216 -AVKTMKPGSM--SVEAFLAEANVMKTLQHDKLVKL-HAVVTKEPIYIITEFMAKGSLLD 271
Query: 465 AISKNVKFSEEDSKFM--TQSLASALSYLHDNYIVHRDIKPENLLVEMSGCHVKVLKVGD 522
+ + + K + + +A ++++ +HRD++ N+LV S V K+ D
Sbjct: 272 FLKSDEGSKQPLPKLIDFSAQIAEGMAFIEQRNYIHRDLRAANILVSAS----LVCKIAD 327
Query: 523 FGLAQRVLRPMFTV---CGTP-TYVAPEILNESGYGVKIDVWAAGVILY-ILLCGFPPFV 577
FGLA+ + +T P + APE +N + +K DVW+ G++L I+ G P+
Sbjct: 328 FGLARVIEDNEYTAREGAKFPIKWTAPEAINFGSFTIKSDVWSFGILLMEIVTYGRIPYP 387
Query: 578 SDTNDQDELFDDILSGQYGFPSPYWDDISEEAKELISHMLESNPDLR 624
+N E+ + G Y P P ++ EE ++ ++ P+ R
Sbjct: 388 GMSN--PEVIRALERG-YRMPRP--ENCPEELYNIMMRCWKNRPEER 429
>pdb|2QOO|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742f Triple Mutant
Length = 373
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 57/214 (26%), Positives = 102/214 (47%), Gaps = 17/214 (7%)
Query: 380 SVGQIIGDGNFAVV---RQVYDKHKDMDCALKIIDKSKLLGKKQMIENEVNILRSVNHPN 436
S+ +++G G F V R K++ A+K + +++ E +I+ +HPN
Sbjct: 48 SIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPN 107
Query: 437 IIKLLDEYDTNNELYLVIELIKGGDLFDAISK-NVKFSEEDSKFMTQSLASALSYLHDNY 495
II+L + + +V E ++ G L + K + +F+ M + +AS + YL D
Sbjct: 108 IIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYLSDMG 167
Query: 496 IVHRDIKPENLLVEMSGCHVKVLKVGDFGLAQRVL----RPMFTVCGTPT---YVAPEIL 548
VHRD+ N+L+ + V KV DFGL+ RVL +T G + +PE +
Sbjct: 168 FVHRDLAARNILINSN----LVCKVSDFGLS-RVLEDDPEAAYTTRGGKIPIRWTSPEAI 222
Query: 549 NESGYGVKIDVWAAGVILY-ILLCGFPPFVSDTN 581
+ DVW+ G++L+ ++ G P+ +N
Sbjct: 223 AYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSN 256
>pdb|3UGC|A Chain A, Structural Basis Of Jak2 Inhibition By The Type Ii
Inhibtor Nvp-Bbt594
Length = 295
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 66/214 (30%), Positives = 105/214 (49%), Gaps = 21/214 (9%)
Query: 372 PSKLLQRY-SVGQIIGDGNFAVVRQV-YDKHKDMDCALKIIDKSKLLGKKQM--IENEVN 427
P++ +R+ Q +G GNF V YD +D + + K + ++ + E E+
Sbjct: 4 PTQFEERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIE 63
Query: 428 ILRSVNHPNIIKL--LDEYDTNNELYLVIELIKGGDLFDAISKNVKFSEEDSKFM--TQS 483
IL+S+ H NI+K + L L++E + G L D + K+ K + K + T
Sbjct: 64 ILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKH-KERIDHIKLLQYTSQ 122
Query: 484 LASALSYLHDNYIVHRDIKPENLLVEMSGCHVKVLKVGDFGLAQRVL---RPMFTV---C 537
+ + YL +HRD+ N+LVE + +K+GDFGL +VL + F V
Sbjct: 123 ICKGMEYLGTKRYIHRDLATRNILVE----NENRVKIGDFGLT-KVLPQDKEFFKVKEPG 177
Query: 538 GTPT-YVAPEILNESGYGVKIDVWAAGVILYILL 570
+P + APE L ES + V DVW+ GV+LY L
Sbjct: 178 ESPIFWYAPESLTESKFSVASDVWSFGVVLYELF 211
>pdb|3ETA|A Chain A, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo
Pyridine Inhibitor
pdb|3ETA|B Chain B, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo
Pyridine Inhibitor
Length = 317
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 60/262 (22%), Positives = 119/262 (45%), Gaps = 32/262 (12%)
Query: 385 IGDGNFAVV-----RQVYDKHKDMDCALKIIDKSKLLGKKQMIENEVNILRSVNHPNIIK 439
+G G+F +V R + + A+K +++S L ++ NE ++++ ++++
Sbjct: 24 LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVR 83
Query: 440 LLDEYDTNNELYLVIELIKGGDLFDAISKNVKFSEEDSKF-----------MTQSLASAL 488
LL +V+EL+ GDL + ++++ E++ M +A +
Sbjct: 84 LLGVVSKGQPTLVVMELMAHGDL-KSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGM 142
Query: 489 SYLHDNYIVHRDIKPENLLVEMSGCHVKVLKVGDFGLAQRVLRPMFTVCGTPT-----YV 543
+YL+ VHRD+ N +V H +K+GDFG+ + + + G ++
Sbjct: 143 AYLNAKKFVHRDLAARNCMV----AHDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWM 198
Query: 544 APEILNESGYGVKIDVWAAGVILY-ILLCGFPPFVSDTNDQDELFDDILSGQYGFPSPYW 602
APE L + + D+W+ GV+L+ I P+ +N+Q F ++ G Y P
Sbjct: 199 APESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQGLSNEQVLKF--VMDGGY-LDQP-- 253
Query: 603 DDISEEAKELISHMLESNPDLR 624
D+ E +L+ + NP +R
Sbjct: 254 DNCPERVTDLMRMCWQFNPKMR 275
>pdb|2HK5|A Chain A, Hck Kinase In Complex With Lck Targetted Inhibitor Pg-
1009247
Length = 270
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 70/278 (25%), Positives = 127/278 (45%), Gaps = 35/278 (12%)
Query: 366 RENLNIPSKLLQRYSVGQIIGDGNFA-VVRQVYDKHKDMDCALKIIDKSKLLGKKQMIEN 424
RE+L + KL G G F V Y+KH + A+K + + +
Sbjct: 14 RESLKLEKKL----------GAGQFGEVWMATYNKHTKV--AVKTMKPGSM--SVEAFLA 59
Query: 425 EVNILRSVNHPNIIKLLDEYDTNNELYLVIELIKGGDLFDAISKNVKFSEEDSKFM--TQ 482
E N+++++ H ++KL T +Y++ E + G L D + + + K + +
Sbjct: 60 EANVMKTLQHDKLVKL-HAVVTKEPIYIITEFMAKGSLLDFLKSDEGSKQPLPKLIDFSA 118
Query: 483 SLASALSYLHDNYIVHRDIKPENLLVEMSGCHVKVLKVGDFGLAQRVLRPMFTV---CGT 539
+A ++++ +HRD++ N+LV S V K+ DFGLA+ + +T
Sbjct: 119 QIAEGMAFIEQRNYIHRDLRAANILVSAS----LVCKIADFGLARVIEDNEYTAREGAKF 174
Query: 540 PT-YVAPEILNESGYGVKIDVWAAGVILY-ILLCGFPPFVSDTNDQDELFDDILSGQYGF 597
P + APE +N + +K DVW+ G++L I+ G P+ +N E+ + G Y
Sbjct: 175 PIKWTAPEAINFGSFTIKSDVWSFGILLMEIVTYGRIPYPGMSN--PEVIRALERG-YRM 231
Query: 598 PSPYWDDISEEAKELISHMLESNPDLRFSAE---DVLD 632
P P ++ EE ++ ++ P+ R + E VLD
Sbjct: 232 PRP--ENCPEELYNIMMRCWKNRPEERPTFEYIQSVLD 267
>pdb|2QON|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742a Triple Mutant
Length = 373
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 57/214 (26%), Positives = 102/214 (47%), Gaps = 17/214 (7%)
Query: 380 SVGQIIGDGNFAVV---RQVYDKHKDMDCALKIIDKSKLLGKKQMIENEVNILRSVNHPN 436
S+ +++G G F V R K++ A+K + +++ E +I+ +HPN
Sbjct: 48 SIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPN 107
Query: 437 IIKLLDEYDTNNELYLVIELIKGGDLFDAISK-NVKFSEEDSKFMTQSLASALSYLHDNY 495
II+L + + +V E ++ G L + K + +F+ M + +AS + YL D
Sbjct: 108 IIRLEGVVTKSKPVMIVTEXMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYLSDMG 167
Query: 496 IVHRDIKPENLLVEMSGCHVKVLKVGDFGLAQRVL----RPMFTVCGTPT---YVAPEIL 548
VHRD+ N+L+ + V KV DFGL+ RVL +T G + +PE +
Sbjct: 168 AVHRDLAARNILINSN----LVCKVSDFGLS-RVLEDDPEAAYTTRGGKIPIRWTSPEAI 222
Query: 549 NESGYGVKIDVWAAGVILY-ILLCGFPPFVSDTN 581
+ DVW+ G++L+ ++ G P+ +N
Sbjct: 223 AYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSN 256
>pdb|2QOI|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f:y602f
Double Mutant
Length = 373
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 57/214 (26%), Positives = 102/214 (47%), Gaps = 17/214 (7%)
Query: 380 SVGQIIGDGNFAVV---RQVYDKHKDMDCALKIIDKSKLLGKKQMIENEVNILRSVNHPN 436
S+ +++G G F V R K++ A+K + +++ E +I+ +HPN
Sbjct: 48 SIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPN 107
Query: 437 IIKLLDEYDTNNELYLVIELIKGGDLFDAISK-NVKFSEEDSKFMTQSLASALSYLHDNY 495
II+L + + +V E ++ G L + K + +F+ M + +AS + YL D
Sbjct: 108 IIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYLSDMG 167
Query: 496 IVHRDIKPENLLVEMSGCHVKVLKVGDFGLAQRVL----RPMFTVCGTPT---YVAPEIL 548
VHRD+ N+L+ + V KV DFGL+ RVL +T G + +PE +
Sbjct: 168 YVHRDLAARNILINSN----LVCKVSDFGLS-RVLEDDPEAAYTTRGGKIPIRWTSPEAI 222
Query: 549 NESGYGVKIDVWAAGVILY-ILLCGFPPFVSDTN 581
+ DVW+ G++L+ ++ G P+ +N
Sbjct: 223 AYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSN 256
>pdb|1IRK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Human Insulin Receptor
Length = 306
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 60/262 (22%), Positives = 119/262 (45%), Gaps = 32/262 (12%)
Query: 385 IGDGNFAVV-----RQVYDKHKDMDCALKIIDKSKLLGKKQMIENEVNILRSVNHPNIIK 439
+G G+F +V R + + A+K +++S L ++ NE ++++ ++++
Sbjct: 25 LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVR 84
Query: 440 LLDEYDTNNELYLVIELIKGGDLFDAISKNVKFSEEDSKF-----------MTQSLASAL 488
LL +V+EL+ GDL + ++++ E++ M +A +
Sbjct: 85 LLGVVSKGQPTLVVMELMAHGDL-KSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGM 143
Query: 489 SYLHDNYIVHRDIKPENLLVEMSGCHVKVLKVGDFGLAQRVLRPMFTVCGTPT-----YV 543
+YL+ VHRD+ N +V H +K+GDFG+ + + + G ++
Sbjct: 144 AYLNAKKFVHRDLAARNCMV----AHDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWM 199
Query: 544 APEILNESGYGVKIDVWAAGVILY-ILLCGFPPFVSDTNDQDELFDDILSGQYGFPSPYW 602
APE L + + D+W+ GV+L+ I P+ +N+Q F ++ G Y P
Sbjct: 200 APESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQGLSNEQVLKF--VMDGGY-LDQP-- 254
Query: 603 DDISEEAKELISHMLESNPDLR 624
D+ E +L+ + NP +R
Sbjct: 255 DNCPERVTDLMRMCWQFNPKMR 276
>pdb|2O8Y|A Chain A, Apo Irak4 Kinase Domain
pdb|2O8Y|B Chain B, Apo Irak4 Kinase Domain
Length = 298
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 57/205 (27%), Positives = 93/205 (45%), Gaps = 20/205 (9%)
Query: 382 GQIIGDGNFAVVRQVYDKHKDMD----CALKIIDKSKLLGKKQMIENEVNILRSVNHPNI 437
G G+G F VV + Y + + A+ I +L KQ + E+ + H N+
Sbjct: 27 GNKXGEGGFGVVYKGYVNNTTVAVKKLAAMVDITTEEL---KQQFDQEIKVXAKCQHENL 83
Query: 438 IKLLDEYDTNNELYLVIELIKGGDLFDAIS---KNVKFSEEDSKFMTQSLASALSYLHDN 494
++LL ++L LV G L D +S S + Q A+ +++LH+N
Sbjct: 84 VELLGFSSDGDDLCLVYVYXPNGSLLDRLSCLDGTPPLSWHXRCKIAQGAANGINFLHEN 143
Query: 495 YIVHRDIKPENLLVEMSGCHVKVLKVGDFGLAQRVLR-----PMFTVCGTPTYVAPEILN 549
+ +HRDIK N+L++ K+ DFGLA+ + + GT Y APE L
Sbjct: 144 HHIHRDIKSANILLD----EAFTAKISDFGLARASEKFAQXVXXSRIVGTTAYXAPEAL- 198
Query: 550 ESGYGVKIDVWAAGVILYILLCGFP 574
K D+++ GV+L ++ G P
Sbjct: 199 RGEITPKSDIYSFGVVLLEIITGLP 223
>pdb|2QOF|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f Mutant
Length = 373
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 57/214 (26%), Positives = 102/214 (47%), Gaps = 17/214 (7%)
Query: 380 SVGQIIGDGNFAVV---RQVYDKHKDMDCALKIIDKSKLLGKKQMIENEVNILRSVNHPN 436
S+ +++G G F V R K++ A+K + +++ E +I+ +HPN
Sbjct: 48 SIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPN 107
Query: 437 IIKLLDEYDTNNELYLVIELIKGGDLFDAISK-NVKFSEEDSKFMTQSLASALSYLHDNY 495
II+L + + +V E ++ G L + K + +F+ M + +AS + YL D
Sbjct: 108 IIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYLSDMG 167
Query: 496 IVHRDIKPENLLVEMSGCHVKVLKVGDFGLAQRVL----RPMFTVCGTPT---YVAPEIL 548
VHRD+ N+L+ + V KV DFGL+ RVL +T G + +PE +
Sbjct: 168 YVHRDLAARNILINSN----LVCKVSDFGLS-RVLEDDPEAAYTTRGGKIPIRWTSPEAI 222
Query: 549 NESGYGVKIDVWAAGVILY-ILLCGFPPFVSDTN 581
+ DVW+ G++L+ ++ G P+ +N
Sbjct: 223 AYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSN 256
>pdb|2QOD|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y602f Mutant
Length = 373
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 57/214 (26%), Positives = 102/214 (47%), Gaps = 17/214 (7%)
Query: 380 SVGQIIGDGNFAVV---RQVYDKHKDMDCALKIIDKSKLLGKKQMIENEVNILRSVNHPN 436
S+ +++G G F V R K++ A+K + +++ E +I+ +HPN
Sbjct: 48 SIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPN 107
Query: 437 IIKLLDEYDTNNELYLVIELIKGGDLFDAISK-NVKFSEEDSKFMTQSLASALSYLHDNY 495
II+L + + +V E ++ G L + K + +F+ M + +AS + YL D
Sbjct: 108 IIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYLSDMG 167
Query: 496 IVHRDIKPENLLVEMSGCHVKVLKVGDFGLAQRVL----RPMFTVCGTPT---YVAPEIL 548
VHRD+ N+L+ + V KV DFGL+ RVL +T G + +PE +
Sbjct: 168 YVHRDLAARNILINSN----LVCKVSDFGLS-RVLEDDPEAAYTTRGGKIPIRWTSPEAI 222
Query: 549 NESGYGVKIDVWAAGVILY-ILLCGFPPFVSDTN 581
+ DVW+ G++L+ ++ G P+ +N
Sbjct: 223 AYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSN 256
>pdb|3FXX|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnye[ptyr]iw
pdb|3FY2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnyefiw
Length = 371
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 57/214 (26%), Positives = 102/214 (47%), Gaps = 17/214 (7%)
Query: 380 SVGQIIGDGNFAVV---RQVYDKHKDMDCALKIIDKSKLLGKKQMIENEVNILRSVNHPN 436
S+ +++G G F V R K++ A+K + +++ E +I+ +HPN
Sbjct: 46 SIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPN 105
Query: 437 IIKLLDEYDTNNELYLVIELIKGGDLFDAISK-NVKFSEEDSKFMTQSLASALSYLHDNY 495
II+L + + +V E ++ G L + K + +F+ M + +AS + YL D
Sbjct: 106 IIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYLSDMG 165
Query: 496 IVHRDIKPENLLVEMSGCHVKVLKVGDFGLAQRVL----RPMFTVCGTPT---YVAPEIL 548
VHRD+ N+L+ + V KV DFGL+ RVL +T G + +PE +
Sbjct: 166 YVHRDLAARNILINSN----LVCKVSDFGLS-RVLEDDPEAAYTTRGGKIPIRWTSPEAI 220
Query: 549 NESGYGVKIDVWAAGVILY-ILLCGFPPFVSDTN 581
+ DVW+ G++L+ ++ G P+ +N
Sbjct: 221 AYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSN 254
>pdb|2QOL|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596:y602:s768g Triple Mutant
Length = 373
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 57/214 (26%), Positives = 101/214 (47%), Gaps = 17/214 (7%)
Query: 380 SVGQIIGDGNFAVV---RQVYDKHKDMDCALKIIDKSKLLGKKQMIENEVNILRSVNHPN 436
S+ +++G G F V R K++ A+K + +++ E +I+ +HPN
Sbjct: 48 SIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPN 107
Query: 437 IIKLLDEYDTNNELYLVIELIKGGDLFDAISK-NVKFSEEDSKFMTQSLASALSYLHDNY 495
II+L + + +V E ++ G L + K + +F+ M + +AS + YL D
Sbjct: 108 IIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYLSDMG 167
Query: 496 IVHRDIKPENLLVEMSGCHVKVLKVGDFGLAQRVL----RPMFTVCGTPT---YVAPEIL 548
VHRD+ N+L+ + V KV DFGL RVL +T G + +PE +
Sbjct: 168 YVHRDLAARNILINSN----LVCKVSDFGLG-RVLEDDPEAAYTTRGGKIPIRWTSPEAI 222
Query: 549 NESGYGVKIDVWAAGVILY-ILLCGFPPFVSDTN 581
+ DVW+ G++L+ ++ G P+ +N
Sbjct: 223 AYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSN 256
>pdb|2QOC|A Chain A, Human Epha3 Kinase Domain, Phosphorylated, Amp-Pnp Bound
Structure
Length = 344
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 57/214 (26%), Positives = 102/214 (47%), Gaps = 17/214 (7%)
Query: 380 SVGQIIGDGNFAVV---RQVYDKHKDMDCALKIIDKSKLLGKKQMIENEVNILRSVNHPN 436
S+ +++G G F V R K++ A+K + +++ E +I+ +HPN
Sbjct: 19 SIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPN 78
Query: 437 IIKLLDEYDTNNELYLVIELIKGGDLFDAISK-NVKFSEEDSKFMTQSLASALSYLHDNY 495
II+L + + +V E ++ G L + K + +F+ M + +AS + YL D
Sbjct: 79 IIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYLSDMG 138
Query: 496 IVHRDIKPENLLVEMSGCHVKVLKVGDFGLAQRVL----RPMFTVCGTPT---YVAPEIL 548
VHRD+ N+L+ + V KV DFGL+ RVL +T G + +PE +
Sbjct: 139 YVHRDLAARNILINSN----LVCKVSDFGLS-RVLEDDPEAAYTTRGGKIPIRWTSPEAI 193
Query: 549 NESGYGVKIDVWAAGVILY-ILLCGFPPFVSDTN 581
+ DVW+ G++L+ ++ G P+ +N
Sbjct: 194 AYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSN 227
>pdb|2GSF|A Chain A, The Human Epha3 Receptor Tyrosine Kinase And Juxtamembrane
Region
pdb|2QO2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Apo Structure
pdb|2QO9|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Phosphorylated, Amp-pnp Bound
Length = 373
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 57/214 (26%), Positives = 102/214 (47%), Gaps = 17/214 (7%)
Query: 380 SVGQIIGDGNFAVV---RQVYDKHKDMDCALKIIDKSKLLGKKQMIENEVNILRSVNHPN 436
S+ +++G G F V R K++ A+K + +++ E +I+ +HPN
Sbjct: 48 SIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPN 107
Query: 437 IIKLLDEYDTNNELYLVIELIKGGDLFDAISK-NVKFSEEDSKFMTQSLASALSYLHDNY 495
II+L + + +V E ++ G L + K + +F+ M + +AS + YL D
Sbjct: 108 IIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYLSDMG 167
Query: 496 IVHRDIKPENLLVEMSGCHVKVLKVGDFGLAQRVL----RPMFTVCGTPT---YVAPEIL 548
VHRD+ N+L+ + V KV DFGL+ RVL +T G + +PE +
Sbjct: 168 YVHRDLAARNILINSN----LVCKVSDFGLS-RVLEDDPEAAYTTRGGKIPIRWTSPEAI 222
Query: 549 NESGYGVKIDVWAAGVILY-ILLCGFPPFVSDTN 581
+ DVW+ G++L+ ++ G P+ +N
Sbjct: 223 AYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSN 256
>pdb|2QOB|A Chain A, Human Epha3 Kinase Domain, Base Structure
Length = 344
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 57/214 (26%), Positives = 102/214 (47%), Gaps = 17/214 (7%)
Query: 380 SVGQIIGDGNFAVV---RQVYDKHKDMDCALKIIDKSKLLGKKQMIENEVNILRSVNHPN 436
S+ +++G G F V R K++ A+K + +++ E +I+ +HPN
Sbjct: 19 SIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPN 78
Query: 437 IIKLLDEYDTNNELYLVIELIKGGDLFDAISK-NVKFSEEDSKFMTQSLASALSYLHDNY 495
II+L + + +V E ++ G L + K + +F+ M + +AS + YL D
Sbjct: 79 IIRLEGVVTKSKPVMIVTEXMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYLSDMG 138
Query: 496 IVHRDIKPENLLVEMSGCHVKVLKVGDFGLAQRVL----RPMFTVCGTPT---YVAPEIL 548
VHRD+ N+L+ + V KV DFGL+ RVL +T G + +PE +
Sbjct: 139 YVHRDLAARNILINSN----LVCKVSDFGLS-RVLEDDPEAAYTTRGGKIPIRWTSPEAI 193
Query: 549 NESGYGVKIDVWAAGVILY-ILLCGFPPFVSDTN 581
+ DVW+ G++L+ ++ G P+ +N
Sbjct: 194 AYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSN 227
>pdb|3LXN|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXP|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 318
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 58/205 (28%), Positives = 93/205 (45%), Gaps = 31/205 (15%)
Query: 385 IGDGNFAVVR-QVYDKHKDMD---CALKIIDKSKLLGKKQMIENEVNILRSVNHPNIIKL 440
+G+G+F V YD D A+K + + + E++ILR++ H +IIK
Sbjct: 39 LGEGHFGKVSLYCYDPTNDGTGEMVAVKALKADAGPQHRSGWKQEIDILRTLYHEHIIKY 98
Query: 441 LD--EYDTNNELYLVIELIKGGDLFDAISKNVKFSEEDSKFMTQSLASALSYLHDNYIVH 498
E L LV+E + G L D + ++ Q + ++YLH + +H
Sbjct: 99 KGCCEDAGAASLQLVMEYVPLGSLRDYLPRH-SIGLAQLLLFAQQICEGMAYLHAQHYIH 157
Query: 499 RDIKPENLLVEMSGCHVKVLKVGDFGLAQRVLR-------------PMFTVCGTPTYVAP 545
RD+ N+L++ +++K+GDFGLA+ V P+F + AP
Sbjct: 158 RDLAARNVLLDND----RLVKIGDFGLAKAVPEGHEXYRVREDGDSPVF-------WYAP 206
Query: 546 EILNESGYGVKIDVWAAGVILYILL 570
E L E + DVW+ GV LY LL
Sbjct: 207 ECLKEYKFYYASDVWSFGVTLYELL 231
>pdb|2QO7|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Amp-Pnp Bound
pdb|2QOQ|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Base, Amp-Pnp
Bound Structure
Length = 373
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 57/214 (26%), Positives = 102/214 (47%), Gaps = 17/214 (7%)
Query: 380 SVGQIIGDGNFAVV---RQVYDKHKDMDCALKIIDKSKLLGKKQMIENEVNILRSVNHPN 436
S+ +++G G F V R K++ A+K + +++ E +I+ +HPN
Sbjct: 48 SIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPN 107
Query: 437 IIKLLDEYDTNNELYLVIELIKGGDLFDAISK-NVKFSEEDSKFMTQSLASALSYLHDNY 495
II+L + + +V E ++ G L + K + +F+ M + +AS + YL D
Sbjct: 108 IIRLEGVVTKSKPVMIVTEXMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYLSDMG 167
Query: 496 IVHRDIKPENLLVEMSGCHVKVLKVGDFGLAQRVL----RPMFTVCGTPT---YVAPEIL 548
VHRD+ N+L+ + V KV DFGL+ RVL +T G + +PE +
Sbjct: 168 YVHRDLAARNILINSN----LVCKVSDFGLS-RVLEDDPEAAYTTRGGKIPIRWTSPEAI 222
Query: 549 NESGYGVKIDVWAAGVILY-ILLCGFPPFVSDTN 581
+ DVW+ G++L+ ++ G P+ +N
Sbjct: 223 AYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSN 256
>pdb|3NYX|A Chain A, Non-Phosphorylated Tyk2 Jh1 Domain With
Quinoline-Thiadiazole- Thiophene Inhibitor
Length = 302
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 57/205 (27%), Positives = 94/205 (45%), Gaps = 31/205 (15%)
Query: 385 IGDGNFAVVR-QVYDKHKDMD---CALKIIDKSKLLGKKQMIENEVNILRSVNHPNIIKL 440
+G+G+F V YD D A+K + + + E++ILR++ H +IIK
Sbjct: 22 LGEGHFGKVSLYCYDPTNDGTGEMVAVKALKADCGPQHRSGWKQEIDILRTLYHEHIIKY 81
Query: 441 LDEYDTNNE--LYLVIELIKGGDLFDAISKNVKFSEEDSKFMTQSLASALSYLHDNYIVH 498
+ E L LV+E + G L D + ++ Q + ++YLH + +H
Sbjct: 82 KGCCEDQGEKSLQLVMEYVPLGSLRDYLPRH-SIGLAQLLLFAQQICEGMAYLHSQHYIH 140
Query: 499 RDIKPENLLVEMSGCHVKVLKVGDFGLAQRVLR-------------PMFTVCGTPTYVAP 545
R++ N+L++ +++K+GDFGLA+ V P+F + AP
Sbjct: 141 RNLAARNVLLDND----RLVKIGDFGLAKAVPEGHEYYRVREDGDSPVF-------WYAP 189
Query: 546 EILNESGYGVKIDVWAAGVILYILL 570
E L E + DVW+ GV LY LL
Sbjct: 190 ECLKEYKFYYASDVWSFGVTLYELL 214
>pdb|3DZQ|A Chain A, Human Epha3 Kinase Domain In Complex With Inhibitor
Awl-Ii- 38.3
pdb|4G2F|A Chain A, Human Epha3 Kinase Domain In Complex With Compound 7
pdb|4GK2|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 66
pdb|4GK3|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 87
pdb|4GK4|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 90
Length = 361
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 57/214 (26%), Positives = 102/214 (47%), Gaps = 17/214 (7%)
Query: 380 SVGQIIGDGNFAVV---RQVYDKHKDMDCALKIIDKSKLLGKKQMIENEVNILRSVNHPN 436
S+ +++G G F V R K++ A+K + +++ E +I+ +HPN
Sbjct: 36 SIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPN 95
Query: 437 IIKLLDEYDTNNELYLVIELIKGGDLFDAISK-NVKFSEEDSKFMTQSLASALSYLHDNY 495
II+L + + +V E ++ G L + K + +F+ M + +AS + YL D
Sbjct: 96 IIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYLSDMG 155
Query: 496 IVHRDIKPENLLVEMSGCHVKVLKVGDFGLAQRVL----RPMFTVCGTPT---YVAPEIL 548
VHRD+ N+L+ + V KV DFGL+ RVL +T G + +PE +
Sbjct: 156 YVHRDLAARNILINSN----LVCKVSDFGLS-RVLEDDPEAAYTTRGGKIPIRWTSPEAI 210
Query: 549 NESGYGVKIDVWAAGVILY-ILLCGFPPFVSDTN 581
+ DVW+ G++L+ ++ G P+ +N
Sbjct: 211 AYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSN 244
>pdb|4G3F|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 2-(aminothiazoly)phenol (cmp2)
Length = 336
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 49/199 (24%), Positives = 91/199 (45%), Gaps = 13/199 (6%)
Query: 385 IGDGNFAVVRQVYDKHKDMDCALKIIDKSKLLGKKQMIENEVNILRSVNHPNIIKLLDEY 444
+G G+F V ++ DK CA+K K +L + E+ ++ P I+ L
Sbjct: 66 VGRGSFGEVHRMKDKQTGFQCAVK---KVRL---EVFRVEELVACAGLSSPRIVPLYGAV 119
Query: 445 DTNNELYLVIELIKGGDLFDAISKNVKFSEEDSKFMTQSLASALSYLHDNYIVHRDIKPE 504
+ + +EL++GG L I + E+ + + L YLH I+H D+K +
Sbjct: 120 REGPWVNIFMELLEGGSLGQLIKQMGCLPEDRALYYLGQALEGLEYLHTRRILHGDVKAD 179
Query: 505 NLLVEMSGCHVKVLKVGDF------GLAQRVLRPMFTVCGTPTYVAPEILNESGYGVKID 558
N+L+ G + G GL + +L + + GT T++APE++ K+D
Sbjct: 180 NVLLSSDGSRAALCDFGHALCLQPDGLGKSLLTGDY-IPGTETHMAPEVVMGKPCDAKVD 238
Query: 559 VWAAGVILYILLCGFPPFV 577
+W++ ++ +L G P+
Sbjct: 239 IWSSCCMMLHMLNGCHPWT 257
>pdb|3PLS|A Chain A, Ron In Complex With Ligand Amp-Pnp
Length = 298
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 62/230 (26%), Positives = 112/230 (48%), Gaps = 18/230 (7%)
Query: 360 TATIKRRENLNIPSKLLQRYSVGQIIGDGNFAVVRQ---VYDKHKDMDCALKIIDKSKLL 416
+A + +++ IP + + +S ++IG G+F VV + + CA+K + + +
Sbjct: 5 SALLAEVKDVLIPHERVVTHS-DRVIGKGHFGVVYHGEYIDQAQNRIQCAIKSLSRITEM 63
Query: 417 GKKQMIENEVNILRSVNHPNIIKLLDEYDTNNEL-YLVIELIKGGDLFDAI-SKNVKFSE 474
+ + E ++R +NHPN++ L+ L ++++ + GDL I S +
Sbjct: 64 QQVEAFLREGLLMRGLNHPNVLALIGIMLPPEGLPHVLLPYMCHGDLLQFIRSPQRNPTV 123
Query: 475 EDSKFMTQSLASALSYLHDNYIVHRDIKPENLLVEMSGCHVKVLKVGDFGLAQRVL-RPM 533
+D +A + YL + VHRD+ N +++ S +KV DFGLA+ +L R
Sbjct: 124 KDLISFGLQVARGMEYLAEQKFVHRDLAARNCMLDES----FTVKVADFGLARDILDREY 179
Query: 534 FTV-----CGTPT-YVAPEILNESGYGVKIDVWAAGVILYILLC-GFPPF 576
++V P + A E L + K DVW+ GV+L+ LL G PP+
Sbjct: 180 YSVQQHRHARLPVKWTALESLQTYRFTTKSDVWSFGVLLWELLTRGAPPY 229
>pdb|3P1A|A Chain A, Structure Of Human Membrane-Associated Tyrosine- And
Threonine- Specific Cdc2-Inhibitory Kinase Myt1 (Pkmyt1)
Length = 311
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 72/264 (27%), Positives = 110/264 (41%), Gaps = 28/264 (10%)
Query: 385 IGDGNFAVVRQVYDKHKDMDCALKIIDKSKLLGKKQMIEN--EVNILRSVN-HPNIIKLL 441
+G G++ V +V K A+K S G K EV V HP ++L
Sbjct: 65 LGHGSYGEVFKVRSKEDGRLYAVKR-SMSPFRGPKDRARKLAEVGSHEKVGQHPCCVRLE 123
Query: 442 DEYDTNNELYLVIELIKGGDLFDAISKNVKFSEEDSKFMTQSLASALSYLHDNYIVHRDI 501
++ LYL EL + E + AL++LH +VH D+
Sbjct: 124 QAWEEGGILYLQTELCGPSLQQHCEAWGASLPEAQVWGYLRDTLLALAHLHSQGLVHLDV 183
Query: 502 KPENLLVEMSG-CHVKVLKVGDFGLAQRVLRPMFTVC------GTPTYVAPEILNESGYG 554
KP N+ + G C K+GDFGL L + T G P Y+APE+L S YG
Sbjct: 184 KPANIFLGPRGRC-----KLGDFGL----LVELGTAGAGEVQEGDPRYMAPELLQGS-YG 233
Query: 555 VKIDVWAAGVILYILLCGFPPFVSDTNDQDELFDDILSGQYGFPSPYWDDISEEAKELIS 614
DV++ G+ + + C + E + + G P + +S E + ++
Sbjct: 234 TAADVFSLGLTILEVACNM-----ELPHGGEGWQQLRQGY--LPPEFTAGLSSELRSVLV 286
Query: 615 HMLESNPDLRFSAEDVLDHPWLER 638
MLE +P LR +AE +L P L +
Sbjct: 287 MMLEPDPKLRATAEALLALPVLRQ 310
>pdb|2BUJ|A Chain A, Crystal Structure Of The Human Serine-Threonine Kinase 16
In Complex With Staurosporine
pdb|2BUJ|B Chain B, Crystal Structure Of The Human Serine-Threonine Kinase 16
In Complex With Staurosporine
Length = 317
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 65/244 (26%), Positives = 108/244 (44%), Gaps = 44/244 (18%)
Query: 366 RENLNIPSKLL----QRYSVGQIIGDGNFAVVRQVYDKHKDMDCALKIIDKSKLLGKKQM 421
RENL ++ + Y Q +G+G F+ V V H ALK I + +++
Sbjct: 14 RENLYFQGHMVIIDNKHYLFIQKLGEGGFSYVDLVEGLHDGHFYALKRILCHEQQDREE- 72
Query: 422 IENEVNILRSVNHPNIIKL----LDEYDTNNELYLVIELIKGGDLFDAIS----KNVKFS 473
+ E ++ R NHPNI++L L E +E +L++ K G L++ I K +
Sbjct: 73 AQREADMHRLFNHPNILRLVAYCLRERGAKHEAWLLLPFFKRGTLWNEIERLKDKGNFLT 132
Query: 474 EEDSKFMTQSLASALSYLHDNYIVHRDIKPENLLVEMSG--------------CHV---- 515
E+ ++ + L +H HRD+KP N+L+ G HV
Sbjct: 133 EDQILWLLLGICRGLEAIHAKGYAHRDLKPTNILLGDEGQPVLMDLGSMNQACIHVEGSR 192
Query: 516 KVLKVGDFGLAQRVLRPMFTVCGTPTYVAPEILNESGYGV---KIDVWAAGVILYILLCG 572
+ L + D+ AQR T +Y APE+ + + V + DVW+ G +LY ++ G
Sbjct: 193 QALTLQDWA-AQRC---------TISYRAPELFSVQSHCVIDERTDVWSLGCVLYAMMFG 242
Query: 573 FPPF 576
P+
Sbjct: 243 EGPY 246
>pdb|1Q8Y|A Chain A, The Structure Of The Yeast Sr Protein Kinase, Sky1p, With
Bound Adp
pdb|1Q8Y|B Chain B, The Structure Of The Yeast Sr Protein Kinase, Sky1p, With
Bound Adp
pdb|1Q8Z|A Chain A, The Apoenzyme Structure Of The Yeast Sr Protein Kinase,
Sky1p
pdb|1Q8Z|B Chain B, The Apoenzyme Structure Of The Yeast Sr Protein Kinase,
Sky1p
pdb|1Q97|A Chain A, The Structure Of The Saccharomyces Cerevisiae Sr Protein
Kinase, Sky1p, With Bound Atp
pdb|1Q97|B Chain B, The Structure Of The Saccharomyces Cerevisiae Sr Protein
Kinase, Sky1p, With Bound Atp
pdb|1Q99|A Chain A, Crystal Structure Of The Saccharomyces Cerevisiae Sr
Protein Kinsae, Sky1p, Complexed With The
Non-Hydrolyzable Atp Analogue, Amp-Pnp
pdb|1Q99|B Chain B, Crystal Structure Of The Saccharomyces Cerevisiae Sr
Protein Kinsae, Sky1p, Complexed With The
Non-Hydrolyzable Atp Analogue, Amp-Pnp
Length = 373
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 78/332 (23%), Positives = 142/332 (42%), Gaps = 85/332 (25%)
Query: 378 RYSVGQIIGDGNFAVVRQVYDKHKDMDCALKIIDKSKLLGKKQMIENEVNILRSVNHPN- 436
RY + + +G G+F+ V D + A+KI+ K+ + E+E+ +L+ VN +
Sbjct: 20 RYILVRKLGWGHFSTVWLAKDMVNNTHVAMKIVRGDKVY--TEAAEDEIKLLQRVNDADN 77
Query: 437 ----------IIKLLDEYDTN--NELYLVIELIKGGDLFDAISKN----VKFSEEDS--- 477
I+KLLD ++ N +++V+ +F+ + +N +K E
Sbjct: 78 TKEDSMGANHILKLLDHFNHKGPNGVHVVM-------VFEVLGENLLALIKKYEHRGIPL 130
Query: 478 ---KFMTQSLASALSYLHDNY-IVHRDIKPENLLVEM--SGCHVKVLKVGDFGLAQRVLR 531
K +++ L L Y+H I+H DIKPEN+L+E+ S ++ +K+ D G A
Sbjct: 131 IYVKQISKQLLLGLDYMHRRCGIIHTDIKPENVLMEIVDSPENLIQIKIADLGNACWYDE 190
Query: 532 PMFTVCGTPTYVAPEILNESGYGVKIDVWAAGVILYILLCGFPPFVSD-----TNDQDEL 586
T Y +PE+L + +G D+W+ +++ L+ G F D T D D +
Sbjct: 191 HYTNSIQTREYRSPEVLLGAPWGCGADIWSTACLIFELITGDFLFEPDEGHSYTKDDDHI 250
Query: 587 -----------------------------------------FDDILSGQYGFPSPYWDDI 605
+D+L+ +Y F D
Sbjct: 251 AQIIELLGELPSYLLRNGKYTRTFFNSRGLLRNISKLKFWPLEDVLTEKYKFSK----DE 306
Query: 606 SEEAKELISHMLESNPDLRFSAEDVLDHPWLE 637
++E + +S ML+ +P R A +++HPWL+
Sbjct: 307 AKEISDFLSPMLQLDPRKRADAGGLVNHPWLK 338
>pdb|1RQQ|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With The Sh2 Domain Of Aps
pdb|1RQQ|B Chain B, Crystal Structure Of The Insulin Receptor Kinase In
Complex With The Sh2 Domain Of Aps
pdb|2AUH|A Chain A, Crystal Structure Of The Grb14 Bps Region In Complex With
The Insulin Receptor Tyrosine Kinase
pdb|2B4S|B Chain B, Crystal Structure Of A Complex Between Ptp1b And The
Insulin Receptor Tyrosine Kinase
pdb|2B4S|D Chain D, Crystal Structure Of A Complex Between Ptp1b And The
Insulin Receptor Tyrosine Kinase
pdb|3BU3|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Peptide
pdb|3BU5|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Peptide And Atp
pdb|3BU6|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Phosphopeptide
Length = 306
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 60/262 (22%), Positives = 119/262 (45%), Gaps = 32/262 (12%)
Query: 385 IGDGNFAVV-----RQVYDKHKDMDCALKIIDKSKLLGKKQMIENEVNILRSVNHPNIIK 439
+G G+F +V R + + A+K +++S L ++ NE ++++ ++++
Sbjct: 25 LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVR 84
Query: 440 LLDEYDTNNELYLVIELIKGGDLFDAISKNVKFSEEDSKF-----------MTQSLASAL 488
LL +V+EL+ GDL + ++++ E++ M +A +
Sbjct: 85 LLGVVSKGQPTLVVMELMAHGDL-KSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGM 143
Query: 489 SYLHDNYIVHRDIKPENLLVEMSGCHVKVLKVGDFGLAQRVLRPMFTVCGTPT-----YV 543
+YL+ VHRD+ N +V H +K+GDFG+ + + G ++
Sbjct: 144 AYLNAKKFVHRDLAARNCMV----AHDFTVKIGDFGMTRDIXETDXXRKGGKGLLPVRWM 199
Query: 544 APEILNESGYGVKIDVWAAGVILY-ILLCGFPPFVSDTNDQDELFDDILSGQYGFPSPYW 602
APE L + + D+W+ GV+L+ I P+ +N+Q F ++ G Y P
Sbjct: 200 APESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQGLSNEQVLKF--VMDGGY-LDQP-- 254
Query: 603 DDISEEAKELISHMLESNPDLR 624
D+ E +L+ + NP++R
Sbjct: 255 DNCPERVTDLMRMCWQFNPNMR 276
>pdb|1HOW|A Chain A, The X-Ray Crystal Structure Of Sky1p, An Sr Protein Kinase
In Yeast
pdb|2JD5|A Chain A, Sky1p Bound To Npl3p-Derived Substrate Peptide
pdb|2JD5|B Chain B, Sky1p Bound To Npl3p-Derived Substrate Peptide
Length = 373
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 78/332 (23%), Positives = 142/332 (42%), Gaps = 85/332 (25%)
Query: 378 RYSVGQIIGDGNFAVVRQVYDKHKDMDCALKIIDKSKLLGKKQMIENEVNILRSVNHPN- 436
RY + + +G G+F+ V D + A+KI+ K+ + E+E+ +L+ VN +
Sbjct: 20 RYILVRKLGWGHFSTVWLAKDMVNNTHVAMKIVRGDKVY--TEAAEDEIKLLQRVNDADN 77
Query: 437 ----------IIKLLDEYDTN--NELYLVIELIKGGDLFDAISKN----VKFSEEDS--- 477
I+KLLD ++ N +++V+ +F+ + +N +K E
Sbjct: 78 TKEDSMGANHILKLLDHFNHKGPNGVHVVM-------VFEVLGENLLALIKKYEHRGIPL 130
Query: 478 ---KFMTQSLASALSYLHDNY-IVHRDIKPENLLVEM--SGCHVKVLKVGDFGLAQRVLR 531
K +++ L L Y+H I+H DIKPEN+L+E+ S ++ +K+ D G A
Sbjct: 131 IYVKQISKQLLLGLDYMHRRCGIIHTDIKPENVLMEIVDSPENLIQIKIADLGNACWYDE 190
Query: 532 PMFTVCGTPTYVAPEILNESGYGVKIDVWAAGVILYILLCGFPPFVSD-----TNDQDEL 586
T Y +PE+L + +G D+W+ +++ L+ G F D T D D +
Sbjct: 191 HYTNSIQTREYRSPEVLLGAPWGCGADIWSTACLIFELITGDFLFEPDEGHSYTKDDDHI 250
Query: 587 -----------------------------------------FDDILSGQYGFPSPYWDDI 605
+D+L+ +Y F D
Sbjct: 251 AQIIELLGELPSYLLRNGKYTRTFFNSRGLLRNISKLKFWPLEDVLTEKYKFSK----DE 306
Query: 606 SEEAKELISHMLESNPDLRFSAEDVLDHPWLE 637
++E + +S ML+ +P R A +++HPWL+
Sbjct: 307 AKEISDFLSPMLQLDPRKRADAGGLVNHPWLK 338
>pdb|3NZ0|A Chain A, Non-Phosphorylated Tyk2 Kinase With Cmp6
Length = 302
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 57/205 (27%), Positives = 94/205 (45%), Gaps = 31/205 (15%)
Query: 385 IGDGNFAVVR-QVYDKHKDMD---CALKIIDKSKLLGKKQMIENEVNILRSVNHPNIIKL 440
+G+G+F V YD D A+K + + + E++ILR++ H +IIK
Sbjct: 22 LGEGHFGKVSLYCYDPTNDGTGEMVAVKALKADCGPQHRSGWKQEIDILRTLYHEHIIKY 81
Query: 441 LDEYDTNNE--LYLVIELIKGGDLFDAISKNVKFSEEDSKFMTQSLASALSYLHDNYIVH 498
+ E L LV+E + G L D + ++ Q + ++YLH + +H
Sbjct: 82 KGCCEDQGEKSLQLVMEYVPLGSLRDYLPRH-SIGLAQLLLFAQQICEGMAYLHAQHYIH 140
Query: 499 RDIKPENLLVEMSGCHVKVLKVGDFGLAQRVLR-------------PMFTVCGTPTYVAP 545
R++ N+L++ +++K+GDFGLA+ V P+F + AP
Sbjct: 141 RNLAARNVLLDND----RLVKIGDFGLAKAVPEGHEYYRVREDGDSPVF-------WYAP 189
Query: 546 EILNESGYGVKIDVWAAGVILYILL 570
E L E + DVW+ GV LY LL
Sbjct: 190 ECLKEYKFYYASDVWSFGVTLYELL 214
>pdb|2W1I|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1I|B Chain B, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 326
Score = 70.1 bits (170), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 64/220 (29%), Positives = 103/220 (46%), Gaps = 33/220 (15%)
Query: 372 PSKLLQRY-SVGQIIGDGNFAVVRQV-YDKHKDMDCALKIIDKSKLLGKKQM--IENEVN 427
P++ +R+ Q +G GNF V YD +D + + K + ++ + E E+
Sbjct: 35 PTQFEERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIE 94
Query: 428 ILRSVNHPNIIKLLDE-YDTNNE-LYLVIELIKGGDLFDAISKNVKFSEEDSKFM--TQS 483
IL+S+ H NI+K Y L L++E + G L D + K+ K + K + T
Sbjct: 95 ILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKH-KERIDHIKLLQYTSQ 153
Query: 484 LASALSYLHDNYIVHRDIKPENLLVEMSGCHVKVLKVGDFGLAQRVLR------------ 531
+ + YL +HRD+ N+LVE + +K+GDFGL + + +
Sbjct: 154 ICKGMEYLGTKRYIHRDLATRNILVE----NENRVKIGDFGLTKVLPQDKEXXKVKEPGE 209
Query: 532 -PMFTVCGTPTYVAPEILNESGYGVKIDVWAAGVILYILL 570
P+F + APE L ES + V DVW+ GV+LY L
Sbjct: 210 SPIF-------WYAPESLTESKFSVASDVWSFGVVLYELF 242
>pdb|3EKK|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor
pdb|3EKN|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor
Length = 307
Score = 70.1 bits (170), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 59/262 (22%), Positives = 120/262 (45%), Gaps = 32/262 (12%)
Query: 385 IGDGNFAVV-----RQVYDKHKDMDCALKIIDKSKLLGKKQMIENEVNILRSVNHPNIIK 439
+G G+F +V R + + A+K +++S L ++ NE ++++ ++++
Sbjct: 26 LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVR 85
Query: 440 LLDEYDTNNELYLVIELIKGGDLFDAISKNVKFSEEDSKF-----------MTQSLASAL 488
LL +V+EL+ GDL + ++++ E++ M +A +
Sbjct: 86 LLGVVSKGQPTLVVMELMAHGDL-KSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGM 144
Query: 489 SYLHDNYIVHRDIKPENLLVEMSGCHVKVLKVGDFGLAQRVLRPMFTVCGTPT-----YV 543
+YL+ VHR++ N +V H +K+GDFG+ + + + G ++
Sbjct: 145 AYLNAKKFVHRNLAARNCMV----AHDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWM 200
Query: 544 APEILNESGYGVKIDVWAAGVILY-ILLCGFPPFVSDTNDQDELFDDILSGQYGFPSPYW 602
APE L + + D+W+ GV+L+ I P+ +N+Q F ++ G Y P
Sbjct: 201 APESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQGLSNEQVLKF--VMDGGY-LDQP-- 255
Query: 603 DDISEEAKELISHMLESNPDLR 624
D+ E +L+ + NP++R
Sbjct: 256 DNCPERVTDLMRMCWQFNPNMR 277
>pdb|4HGE|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
pdb|4HGE|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
Length = 300
Score = 70.1 bits (170), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 63/220 (28%), Positives = 103/220 (46%), Gaps = 33/220 (15%)
Query: 372 PSKLLQRY-SVGQIIGDGNFAVVRQV-YDKHKDMDCALKIIDKSKLLGKKQM--IENEVN 427
P++ +R+ Q +G GNF V YD +D + + K + ++ + E E+
Sbjct: 9 PTQFEERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIE 68
Query: 428 ILRSVNHPNIIKL--LDEYDTNNELYLVIELIKGGDLFDAISKNVKFSEEDSKFM--TQS 483
IL+S+ H NI+K + L L++E + G L D + K+ K + K + T
Sbjct: 69 ILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKH-KERIDHIKLLQYTSQ 127
Query: 484 LASALSYLHDNYIVHRDIKPENLLVEMSGCHVKVLKVGDFGLAQRVLR------------ 531
+ + YL +HRD+ N+LVE + +K+GDFGL + + +
Sbjct: 128 ICKGMEYLGTKRYIHRDLATRNILVE----NENRVKIGDFGLTKVLPQDKEXXKVKEPGE 183
Query: 532 -PMFTVCGTPTYVAPEILNESGYGVKIDVWAAGVILYILL 570
P+F + APE L ES + V DVW+ GV+LY L
Sbjct: 184 SPIF-------WYAPESLTESKFSVASDVWSFGVVLYELF 216
>pdb|4E4M|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|D Chain D, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|E Chain E, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4F08|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F08|B Chain B, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F09|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
Length = 302
Score = 70.1 bits (170), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 64/220 (29%), Positives = 103/220 (46%), Gaps = 33/220 (15%)
Query: 372 PSKLLQRY-SVGQIIGDGNFAVVRQV-YDKHKDMDCALKIIDKSKLLGKKQM--IENEVN 427
P++ +R+ Q +G GNF V YD +D + + K + ++ + E E+
Sbjct: 11 PTQFEERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIE 70
Query: 428 ILRSVNHPNIIKLLDE-YDTNNE-LYLVIELIKGGDLFDAISKNVKFSEEDSKFM--TQS 483
IL+S+ H NI+K Y L L++E + G L D + K+ K + K + T
Sbjct: 71 ILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKH-KERIDHIKLLQYTSQ 129
Query: 484 LASALSYLHDNYIVHRDIKPENLLVEMSGCHVKVLKVGDFGLAQRVLR------------ 531
+ + YL +HRD+ N+LVE + +K+GDFGL + + +
Sbjct: 130 ICKGMEYLGTKRYIHRDLATRNILVE----NENRVKIGDFGLTKVLPQDKEXXKVKEPGE 185
Query: 532 -PMFTVCGTPTYVAPEILNESGYGVKIDVWAAGVILYILL 570
P+F + APE L ES + V DVW+ GV+LY L
Sbjct: 186 SPIF-------WYAPESLTESKFSVASDVWSFGVVLYELF 218
>pdb|2VAG|A Chain A, Crystal Structure Of Di-Phosphorylated Human Clk1 In
Complex With A Novel Substituted Indole Inhibitor
Length = 339
Score = 70.1 bits (170), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 78/325 (24%), Positives = 132/325 (40%), Gaps = 65/325 (20%)
Query: 375 LLQRYSVGQIIGDGNFAVVRQVYD-KHKDMDCALKIIDKSKLLGKKQMIENEVNILRSVN 433
L RY + +G+G F V + D K A+KI+ + +E+ +L +N
Sbjct: 12 LSARYEIVDTLGEGAFGKVVECIDHKAGGRHVAVKIVKNVDRYC--EAARSEIQVLEHLN 69
Query: 434 --HPN----IIKLLDEYDTNNELYLVIELIKGGDLFDAISKN--VKFSEEDSKFMTQSLA 485
PN +++L+ ++ + + +V EL+ G +D I +N + F + + M +
Sbjct: 70 TTDPNSTFRCVQMLEWFEHHGHICIVFELL-GLSTYDFIKENGFLPFRLDHIRKMAYQIC 128
Query: 486 SALSYLHDNYIVHRDIKPENLLVEMS----GCHVKV-----------LKVGDFGLAQRVL 530
++++LH N + H D+KPEN+L S + K+ +KV DFG A
Sbjct: 129 KSVNFLHSNKLTHTDLKPENILFVQSDYTEAYNPKIKRDERTLINPDIKVVDFGSATYDD 188
Query: 531 RPMFTVCGTPTYVAPEILNESGYGVKIDVWAAGVILYILLCGFPPF-VSDTNDQDELFDD 589
T+ Y APE++ G+ DVW+ G IL GF F D+ + + +
Sbjct: 189 EHHSTLVXXRHYRAPEVILALGWSQPCDVWSIGCILIEYYLGFTVFPTHDSKEHLAMMER 248
Query: 590 ILSG------QYGFPSPY-------WDDISEEAK------------------------EL 612
IL Q Y WD+ S + +L
Sbjct: 249 ILGPLPKHMIQKTRKRKYFHHDRLDWDEHSSAGRYVSRACKPLKEFMLSQDVEHERLFDL 308
Query: 613 ISHMLESNPDLRFSAEDVLDHPWLE 637
I MLE +P R + + L HP+ +
Sbjct: 309 IQKMLEYDPAKRITLREALKHPFFD 333
>pdb|3TJC|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJC|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJD|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 19
pdb|3TJD|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 19
Length = 298
Score = 70.1 bits (170), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 64/220 (29%), Positives = 103/220 (46%), Gaps = 33/220 (15%)
Query: 372 PSKLLQRY-SVGQIIGDGNFAVVRQV-YDKHKDMDCALKIIDKSKLLGKKQM--IENEVN 427
P++ +R+ Q +G GNF V YD +D + + K + ++ + E E+
Sbjct: 7 PTQFEERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIE 66
Query: 428 ILRSVNHPNIIKLLDE-YDTNNE-LYLVIELIKGGDLFDAISKNVKFSEEDSKFM--TQS 483
IL+S+ H NI+K Y L L++E + G L D + K+ K + K + T
Sbjct: 67 ILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKH-KERIDHIKLLQYTSQ 125
Query: 484 LASALSYLHDNYIVHRDIKPENLLVEMSGCHVKVLKVGDFGLAQRVLR------------ 531
+ + YL +HRD+ N+LVE + +K+GDFGL + + +
Sbjct: 126 ICKGMEYLGTKRYIHRDLATRNILVE----NENRVKIGDFGLTKVLPQDKEXXKVKEPGE 181
Query: 532 -PMFTVCGTPTYVAPEILNESGYGVKIDVWAAGVILYILL 570
P+F + APE L ES + V DVW+ GV+LY L
Sbjct: 182 SPIF-------WYAPESLTESKFSVASDVWSFGVVLYELF 214
>pdb|4G3C|A Chain A, Crystal Structure Of Apo Murine Nf-kappab Inducing Kinase
(nik)
pdb|4G3C|B Chain B, Crystal Structure Of Apo Murine Nf-kappab Inducing Kinase
(nik)
pdb|4G3E|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 6-alkynylindoline (cmp1)
pdb|4G3E|B Chain B, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 6-alkynylindoline (cmp1)
Length = 352
Score = 70.1 bits (170), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 49/199 (24%), Positives = 91/199 (45%), Gaps = 13/199 (6%)
Query: 385 IGDGNFAVVRQVYDKHKDMDCALKIIDKSKLLGKKQMIENEVNILRSVNHPNIIKLLDEY 444
+G G+F V ++ DK CA+K K +L + E+ ++ P I+ L
Sbjct: 82 VGRGSFGEVHRMKDKQTGFQCAVK---KVRL---EVFRVEELVACAGLSSPRIVPLYGAV 135
Query: 445 DTNNELYLVIELIKGGDLFDAISKNVKFSEEDSKFMTQSLASALSYLHDNYIVHRDIKPE 504
+ + +EL++GG L I + E+ + + L YLH I+H D+K +
Sbjct: 136 REGPWVNIFMELLEGGSLGQLIKQMGCLPEDRALYYLGQALEGLEYLHTRRILHGDVKAD 195
Query: 505 NLLVEMSGCHVKVLKVGDF------GLAQRVLRPMFTVCGTPTYVAPEILNESGYGVKID 558
N+L+ G + G GL + +L + + GT T++APE++ K+D
Sbjct: 196 NVLLSSDGSRAALCDFGHALCLQPDGLGKSLLTGDY-IPGTETHMAPEVVMGKPCDAKVD 254
Query: 559 VWAAGVILYILLCGFPPFV 577
+W++ ++ +L G P+
Sbjct: 255 IWSSCCMMLHMLNGCHPWT 273
>pdb|1P14|A Chain A, Crystal Structure Of A Catalytic-Loop Mutant Of The
Insulin Receptor Tyrosine Kinase
Length = 306
Score = 69.7 bits (169), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 59/262 (22%), Positives = 120/262 (45%), Gaps = 32/262 (12%)
Query: 385 IGDGNFAVV-----RQVYDKHKDMDCALKIIDKSKLLGKKQMIENEVNILRSVNHPNIIK 439
+G G+F +V R + + A+K +++S L ++ NE ++++ ++++
Sbjct: 25 LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVR 84
Query: 440 LLDEYDTNNELYLVIELIKGGDLFDAISKNVKFSEEDSKF-----------MTQSLASAL 488
LL +V+EL+ GDL + ++++ E++ M +A +
Sbjct: 85 LLGVVSKGQPTLVVMELMAHGDL-KSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGM 143
Query: 489 SYLHDNYIVHRDIKPENLLVEMSGCHVKVLKVGDFGLAQRVLRPMFTVCGTPT-----YV 543
+YL+ VHR++ N +V H +K+GDFG+ + + + G ++
Sbjct: 144 AYLNAKKFVHRNLAARNCMV----AHDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWM 199
Query: 544 APEILNESGYGVKIDVWAAGVILY-ILLCGFPPFVSDTNDQDELFDDILSGQYGFPSPYW 602
APE L + + D+W+ GV+L+ I P+ +N+Q F ++ G Y P
Sbjct: 200 APESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQGLSNEQVLKF--VMDGGY-LDQP-- 254
Query: 603 DDISEEAKELISHMLESNPDLR 624
D+ E +L+ + NP++R
Sbjct: 255 DNCPERVTDLMRMCWQFNPNMR 276
>pdb|4AQC|A Chain A, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
pdb|4AQC|B Chain B, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
Length = 301
Score = 69.7 bits (169), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 64/220 (29%), Positives = 103/220 (46%), Gaps = 33/220 (15%)
Query: 372 PSKLLQRY-SVGQIIGDGNFAVVRQV-YDKHKDMDCALKIIDKSKLLGKKQM--IENEVN 427
P++ +R+ Q +G GNF V YD +D + + K + ++ + E E+
Sbjct: 10 PTQFEERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIE 69
Query: 428 ILRSVNHPNIIKLLDE-YDTNNE-LYLVIELIKGGDLFDAISKNVKFSEEDSKFM--TQS 483
IL+S+ H NI+K Y L L++E + G L D + K+ K + K + T
Sbjct: 70 ILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKH-KERIDHIKLLQYTSQ 128
Query: 484 LASALSYLHDNYIVHRDIKPENLLVEMSGCHVKVLKVGDFGLAQRVLR------------ 531
+ + YL +HRD+ N+LVE + +K+GDFGL + + +
Sbjct: 129 ICKGMEYLGTKRYIHRDLATRNILVE----NENRVKIGDFGLTKVLPQDKEXXKVKEPGE 184
Query: 532 -PMFTVCGTPTYVAPEILNESGYGVKIDVWAAGVILYILL 570
P+F + APE L ES + V DVW+ GV+LY L
Sbjct: 185 SPIF-------WYAPESLTESKFSVASDVWSFGVVLYELF 217
>pdb|3KUL|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 69.7 bits (169), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 63/235 (26%), Positives = 110/235 (46%), Gaps = 20/235 (8%)
Query: 378 RYSVGQIIGDGNFAVV---RQVYDKHKDMDCALKIIDKSKLLGKKQMIENEVNILRSVNH 434
R + +IIG G+ V R +D+ A+K + +++ +E +I+ +H
Sbjct: 50 RIHIEKIIGSGDSGEVCYGRLRVPGQRDVPVAIKALKAGYTERQRRDFLSEASIMGQFDH 109
Query: 435 PNIIKLLDEYDTNNELYLVIELIKGGDLFDAI-SKNVKFSEEDSKFMTQSLASALSYLHD 493
PNII+L +V E ++ G L + + + +F+ M + + + + YL D
Sbjct: 110 PNIIRLEGVVTRGRLAMIVTEYMENGSLDTFLRTHDGQFTIMQLVGMLRGVGAGMRYLSD 169
Query: 494 NYIVHRDIKPENLLVEMSGCHVKVLKVGDFGLAQRVLR----PMFTVCGTPT---YVAPE 546
VHRD+ N+LV+ + V KV DFGL+ RVL +T G + APE
Sbjct: 170 LGYVHRDLAARNVLVDSN----LVCKVSDFGLS-RVLEDDPDAAYTTTGGKIPIRWTAPE 224
Query: 547 ILNESGYGVKIDVWAAGVILY-ILLCGFPPFVSDTNDQDELFDDILSGQYGFPSP 600
+ + DVW+ GV+++ +L G P+ + TN ++ + G Y P+P
Sbjct: 225 AIAFRTFSSASDVWSFGVVMWEVLAYGERPYWNMTN--RDVISSVEEG-YRLPAP 276
>pdb|2Z8C|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex
With (4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin-2-
Yl]amino}phenyl)acetic Acid
Length = 303
Score = 69.7 bits (169), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 60/262 (22%), Positives = 118/262 (45%), Gaps = 32/262 (12%)
Query: 385 IGDGNFAVV-----RQVYDKHKDMDCALKIIDKSKLLGKKQMIENEVNILRSVNHPNIIK 439
+G G+F +V R + + A+K +++S L ++ NE ++++ ++++
Sbjct: 22 LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVR 81
Query: 440 LLDEYDTNNELYLVIELIKGGDLFDAISKNVKFSEEDSKF-----------MTQSLASAL 488
LL +V+EL+ GDL + ++++ E++ M +A +
Sbjct: 82 LLGVVSKGQPTLVVMELMAHGDL-KSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGM 140
Query: 489 SYLHDNYIVHRDIKPENLLVEMSGCHVKVLKVGDFGLAQRVLRPMFTVCGTPT-----YV 543
+YL+ VHRD+ N +V H +K+GDFG+ + + G ++
Sbjct: 141 AYLNAKKFVHRDLAARNCMV----AHDFTVKIGDFGMTRDIXETDXXRKGGKGLLPVRWM 196
Query: 544 APEILNESGYGVKIDVWAAGVILY-ILLCGFPPFVSDTNDQDELFDDILSGQYGFPSPYW 602
APE L + + D+W+ GV+L+ I P+ +N+Q F ++ G Y P
Sbjct: 197 APESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQGLSNEQVLKF--VMDGGY-LDQP-- 251
Query: 603 DDISEEAKELISHMLESNPDLR 624
D+ E +L+ + NP +R
Sbjct: 252 DNCPERVTDLMRMCWQFNPKMR 273
>pdb|4G3G|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) V408l Bound To A 2-(aminothiazolyl)phenol (cmp3)
Length = 350
Score = 69.7 bits (169), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 49/199 (24%), Positives = 91/199 (45%), Gaps = 13/199 (6%)
Query: 385 IGDGNFAVVRQVYDKHKDMDCALKIIDKSKLLGKKQMIENEVNILRSVNHPNIIKLLDEY 444
+G G+F V ++ DK CA+K K +L + E+ ++ P I+ L
Sbjct: 80 LGRGSFGEVHRMKDKQTGFQCAVK---KVRL---EVFRVEELVACAGLSSPRIVPLYGAV 133
Query: 445 DTNNELYLVIELIKGGDLFDAISKNVKFSEEDSKFMTQSLASALSYLHDNYIVHRDIKPE 504
+ + +EL++GG L I + E+ + + L YLH I+H D+K +
Sbjct: 134 REGPWVNIFMELLEGGSLGQLIKQMGCLPEDRALYYLGQALEGLEYLHTRRILHGDVKAD 193
Query: 505 NLLVEMSGCHVKVLKVGDF------GLAQRVLRPMFTVCGTPTYVAPEILNESGYGVKID 558
N+L+ G + G GL + +L + + GT T++APE++ K+D
Sbjct: 194 NVLLSSDGSRAALCDFGHALCLQPDGLGKSLLTGDY-IPGTETHMAPEVVMGKPCDAKVD 252
Query: 559 VWAAGVILYILLCGFPPFV 577
+W++ ++ +L G P+
Sbjct: 253 IWSSCCMMLHMLNGCHPWT 271
>pdb|3RVG|A Chain A, Crystals Structure Of Jak2 With A
1-Amino-5h-Pyrido[4,3-B]indol-4- Carboxamide Inhibitor
Length = 303
Score = 69.7 bits (169), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 63/220 (28%), Positives = 103/220 (46%), Gaps = 33/220 (15%)
Query: 372 PSKLLQRY-SVGQIIGDGNFAVVRQV-YDKHKDMDCALKIIDKSKLLGKKQM--IENEVN 427
P++ +R+ Q +G GNF V YD +D + + K + ++ + E E+
Sbjct: 8 PTQFEERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIE 67
Query: 428 ILRSVNHPNIIKL--LDEYDTNNELYLVIELIKGGDLFDAISKNVKFSEEDSKFM--TQS 483
IL+S+ H NI+K + L L++E + G L D + K+ K + K + T
Sbjct: 68 ILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKH-KERIDHIKLLQYTSQ 126
Query: 484 LASALSYLHDNYIVHRDIKPENLLVEMSGCHVKVLKVGDFGLAQRVLR------------ 531
+ + YL +HRD+ N+LVE + +K+GDFGL + + +
Sbjct: 127 ICKGMEYLGTKRYIHRDLATRNILVE----NENRVKIGDFGLTKVLPQDKEXXKVKEPGE 182
Query: 532 -PMFTVCGTPTYVAPEILNESGYGVKIDVWAAGVILYILL 570
P+F + APE L ES + V DVW+ GV+LY L
Sbjct: 183 SPIF-------WYAPESLTESKFSVASDVWSFGVVLYELF 215
>pdb|3E62|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E63|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E64|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
Length = 293
Score = 69.7 bits (169), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 63/220 (28%), Positives = 102/220 (46%), Gaps = 33/220 (15%)
Query: 372 PSKLLQRY-SVGQIIGDGNFAVVRQV-YDKHKDMDCALKIIDKSKLLGKKQM--IENEVN 427
P++ +R+ Q +G GNF V YD +D + + K + ++ + E E+
Sbjct: 3 PTQFEERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIE 62
Query: 428 ILRSVNHPNIIKL--LDEYDTNNELYLVIELIKGGDLFDAISKNVKFSEEDSKFM--TQS 483
IL+S+ H NI+K + L L++E + G L D + K+ K + K + T
Sbjct: 63 ILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKH-KERIDHIKLLQYTSQ 121
Query: 484 LASALSYLHDNYIVHRDIKPENLLVEMSGCHVKVLKVGDFGLAQRVLR------------ 531
+ + YL +HRD+ N+LVE +K+GDFGL + + +
Sbjct: 122 ICKGMEYLGTKRYIHRDLATRNILVENEN----RVKIGDFGLTKVLPQDKEXXKVKEPGE 177
Query: 532 -PMFTVCGTPTYVAPEILNESGYGVKIDVWAAGVILYILL 570
P+F + APE L ES + V DVW+ GV+LY L
Sbjct: 178 SPIF-------WYAPESLTESKFSVASDVWSFGVVLYELF 210
>pdb|2B7A|A Chain A, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|2B7A|B Chain B, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|3FUP|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3FUP|B Chain B, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 293
Score = 69.7 bits (169), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 63/220 (28%), Positives = 103/220 (46%), Gaps = 33/220 (15%)
Query: 372 PSKLLQRY-SVGQIIGDGNFAVVRQV-YDKHKDMDCALKIIDKSKLLGKKQM--IENEVN 427
P++ +R+ Q +G GNF V YD +D + + K + ++ + E E+
Sbjct: 2 PTQFEERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIE 61
Query: 428 ILRSVNHPNIIKL--LDEYDTNNELYLVIELIKGGDLFDAISKNVKFSEEDSKFM--TQS 483
IL+S+ H NI+K + L L++E + G L D + K+ K + K + T
Sbjct: 62 ILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKH-KERIDHIKLLQYTSQ 120
Query: 484 LASALSYLHDNYIVHRDIKPENLLVEMSGCHVKVLKVGDFGLAQRVLR------------ 531
+ + YL +HRD+ N+LVE + +K+GDFGL + + +
Sbjct: 121 ICKGMEYLGTKRYIHRDLATRNILVE----NENRVKIGDFGLTKVLPQDKEXXKVKEPGE 176
Query: 532 -PMFTVCGTPTYVAPEILNESGYGVKIDVWAAGVILYILL 570
P+F + APE L ES + V DVW+ GV+LY L
Sbjct: 177 SPIF-------WYAPESLTESKFSVASDVWSFGVVLYELF 209
>pdb|3Q32|A Chain A, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
pdb|3Q32|B Chain B, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
Length = 301
Score = 69.7 bits (169), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 63/220 (28%), Positives = 103/220 (46%), Gaps = 33/220 (15%)
Query: 372 PSKLLQRY-SVGQIIGDGNFAVVRQV-YDKHKDMDCALKIIDKSKLLGKKQM--IENEVN 427
P++ +R+ Q +G GNF V YD +D + + K + ++ + E E+
Sbjct: 4 PTQFEERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIE 63
Query: 428 ILRSVNHPNIIKL--LDEYDTNNELYLVIELIKGGDLFDAISKNVKFSEEDSKFM--TQS 483
IL+S+ H NI+K + L L++E + G L D + K+ K + K + T
Sbjct: 64 ILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKH-KERIDHIKLLQYTSQ 122
Query: 484 LASALSYLHDNYIVHRDIKPENLLVEMSGCHVKVLKVGDFGLAQRVLR------------ 531
+ + YL +HRD+ N+LVE + +K+GDFGL + + +
Sbjct: 123 ICKGMEYLGTKRYIHRDLATRNILVE----NENRVKIGDFGLTKVLPQDKEXXKVKEPGE 178
Query: 532 -PMFTVCGTPTYVAPEILNESGYGVKIDVWAAGVILYILL 570
P+F + APE L ES + V DVW+ GV+LY L
Sbjct: 179 SPIF-------WYAPESLTESKFSVASDVWSFGVVLYELF 211
>pdb|3DBQ|A Chain A, Crystal Structure Of Ttk Kinase Domain
Length = 343
Score = 69.7 bits (169), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 78/282 (27%), Positives = 135/282 (47%), Gaps = 37/282 (13%)
Query: 379 YSVGQIIGDGNFAVVRQVYDKHKDMDCALKIIDKSKLLGKKQMIE---NEVNILRSVNHP 435
YS+ + IG G + V QV ++ K + A+K ++ + Q ++ NE+ L +
Sbjct: 11 YSILKQIGSGGSSKVFQVLNEKKQI-YAIKYVNLEE--ADNQTLDSYRNEIAYLNKLQQH 67
Query: 436 N--IIKLLDEYDTNNELYLVIELIKGGDLFDAISKNVKFSEEDSKFMTQSLASALSYLHD 493
+ II+L D T+ +Y+V+E DL + K + K +++ A+ +H
Sbjct: 68 SDKIIRLYDYEITDQYIYMVMEC-GNIDLNSWLKKKKSIDPWERKSYWKNMLEAVHTIHQ 126
Query: 494 NYIVHRDIKPENLLVEMSGCHVKVLKVGDFGLAQRVLRPMFTV-----CGTPTYVAPEIL 548
+ IVH D+KP N L+ + G +LK+ DFG+A ++ +V GT Y+ PE +
Sbjct: 127 HGIVHSDLKPANFLI-VDG----MLKLIDFGIANQMQPDTTSVVKDSQVGTVNYMPPEAI 181
Query: 549 N------ESG-----YGVKIDVWAAGVILYILLCGFPPFVSDTNDQDELFDDI-LSGQYG 596
E+G K DVW+ G ILY + G PF N +L I + +
Sbjct: 182 KDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQISKLHAIIDPNHEIE 241
Query: 597 FPSPYWDDISE-EAKELISHMLESNPDLRFSAEDVLDHPWLE 637
FP DI E + ++++ L+ +P R S ++L HP+++
Sbjct: 242 FP-----DIPEKDLQDVLKCCLKRDPKQRISIPELLAHPYVQ 278
>pdb|3LPB|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3LPB|B Chain B, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3KRR|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
Quinoxaline Atp Site Inhibitor
Length = 295
Score = 69.7 bits (169), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 64/220 (29%), Positives = 103/220 (46%), Gaps = 33/220 (15%)
Query: 372 PSKLLQRY-SVGQIIGDGNFAVVRQV-YDKHKDMDCALKIIDKSKLLGKKQM--IENEVN 427
P++ +R+ Q +G GNF V YD +D + + K + ++ + E E+
Sbjct: 4 PTQFEERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIE 63
Query: 428 ILRSVNHPNIIKLLDE-YDTNNE-LYLVIELIKGGDLFDAISKNVKFSEEDSKFM--TQS 483
IL+S+ H NI+K Y L L++E + G L D + K+ K + K + T
Sbjct: 64 ILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKH-KERIDHIKLLQYTSQ 122
Query: 484 LASALSYLHDNYIVHRDIKPENLLVEMSGCHVKVLKVGDFGLAQRVLR------------ 531
+ + YL +HRD+ N+LVE + +K+GDFGL + + +
Sbjct: 123 ICKGMEYLGTKRYIHRDLATRNILVE----NENRVKIGDFGLTKVLPQDKEXXKVKEPGE 178
Query: 532 -PMFTVCGTPTYVAPEILNESGYGVKIDVWAAGVILYILL 570
P+F + APE L ES + V DVW+ GV+LY L
Sbjct: 179 SPIF-------WYAPESLTESKFSVASDVWSFGVVLYELF 211
>pdb|1IR3|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex
With Peptide Substrate And Atp Analog
pdb|1GAG|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With A Bisubstrate Inhibitor
Length = 306
Score = 69.7 bits (169), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 60/262 (22%), Positives = 118/262 (45%), Gaps = 32/262 (12%)
Query: 385 IGDGNFAVV-----RQVYDKHKDMDCALKIIDKSKLLGKKQMIENEVNILRSVNHPNIIK 439
+G G+F +V R + + A+K +++S L ++ NE ++++ ++++
Sbjct: 25 LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVR 84
Query: 440 LLDEYDTNNELYLVIELIKGGDLFDAISKNVKFSEEDSKF-----------MTQSLASAL 488
LL +V+EL+ GDL + ++++ E++ M +A +
Sbjct: 85 LLGVVSKGQPTLVVMELMAHGDL-KSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGM 143
Query: 489 SYLHDNYIVHRDIKPENLLVEMSGCHVKVLKVGDFGLAQRVLRPMFTVCGTPT-----YV 543
+YL+ VHRD+ N +V H +K+GDFG+ + + G ++
Sbjct: 144 AYLNAKKFVHRDLAARNCMV----AHDFTVKIGDFGMTRDIXETDXXRKGGKGLLPVRWM 199
Query: 544 APEILNESGYGVKIDVWAAGVILY-ILLCGFPPFVSDTNDQDELFDDILSGQYGFPSPYW 602
APE L + + D+W+ GV+L+ I P+ +N+Q F ++ G Y P
Sbjct: 200 APESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQGLSNEQVLKF--VMDGGY-LDQP-- 254
Query: 603 DDISEEAKELISHMLESNPDLR 624
D+ E +L+ + NP +R
Sbjct: 255 DNCPERVTDLMRMCWQFNPKMR 276
>pdb|3HMN|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With Atp
pdb|3HMO|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With The Inhibitor Staurosporine
pdb|3HMP|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With A Quinazolin Ligand Compound 4
Length = 342
Score = 69.3 bits (168), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 78/282 (27%), Positives = 135/282 (47%), Gaps = 37/282 (13%)
Query: 379 YSVGQIIGDGNFAVVRQVYDKHKDMDCALKIIDKSKLLGKKQMIE---NEVNILRSVNHP 435
YS+ + IG G + V QV ++ K + A+K ++ + Q ++ NE+ L +
Sbjct: 58 YSILKQIGSGGSSKVFQVLNEKKQI-YAIKYVNLEE--ADNQTLDSYRNEIAYLNKLQQH 114
Query: 436 N--IIKLLDEYDTNNELYLVIELIKGGDLFDAISKNVKFSEEDSKFMTQSLASALSYLHD 493
+ II+L D T+ +Y+V+E DL + K + K +++ A+ +H
Sbjct: 115 SDKIIRLYDYEITDQYIYMVMEC-GNIDLNSWLKKKKSIDPWERKSYWKNMLEAVHTIHQ 173
Query: 494 NYIVHRDIKPENLLVEMSGCHVKVLKVGDFGLAQRVLRPMFTV-----CGTPTYVAPEIL 548
+ IVH D+KP N L+ + G +LK+ DFG+A ++ +V GT Y+ PE +
Sbjct: 174 HGIVHSDLKPANFLI-VDG----MLKLIDFGIANQMQPDTTSVVKDSQVGTVNYMPPEAI 228
Query: 549 N------ESG-----YGVKIDVWAAGVILYILLCGFPPFVSDTNDQDELFDDI-LSGQYG 596
E+G K DVW+ G ILY + G PF N +L I + +
Sbjct: 229 KDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQISKLHAIIDPNHEIE 288
Query: 597 FPSPYWDDISE-EAKELISHMLESNPDLRFSAEDVLDHPWLE 637
FP DI E + ++++ L+ +P R S ++L HP+++
Sbjct: 289 FP-----DIPEKDLQDVLKCCLKRDPKQRISIPELLAHPYVQ 325
>pdb|3JY9|A Chain A, Janus Kinase 2 Inhibitors
Length = 311
Score = 69.3 bits (168), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 62/208 (29%), Positives = 97/208 (46%), Gaps = 32/208 (15%)
Query: 383 QIIGDGNFAVVRQV-YDKHKDMDCALKIIDKSKLLGKKQM--IENEVNILRSVNHPNIIK 439
Q +G GNF V YD +D + + K + ++ + E E+ IL+S+ H NI+K
Sbjct: 34 QQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVK 93
Query: 440 LLDE-YDTNNE-LYLVIELIKGGDLFDAISKNVKFSEEDSKFM--TQSLASALSYLHDNY 495
Y L L++E + G L D + K+ K + K + T + + YL
Sbjct: 94 YKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKH-KERIDHIKLLQYTSQICKGMEYLGTKR 152
Query: 496 IVHRDIKPENLLVEMSGCHVKVLKVGDFGLAQRVLR-------------PMFTVCGTPTY 542
+HRD+ N+LVE + +K+GDFGL + + + P+F +
Sbjct: 153 YIHRDLATRNILVE----NENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIF-------W 201
Query: 543 VAPEILNESGYGVKIDVWAAGVILYILL 570
APE L ES + V DVW+ GV+LY L
Sbjct: 202 YAPESLTESKFSVASDVWSFGVVLYELF 229
>pdb|3D7T|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 269
Score = 69.3 bits (168), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 55/189 (29%), Positives = 86/189 (45%), Gaps = 14/189 (7%)
Query: 383 QIIGDGNFAVVRQVYDKHKDMDCALKIIDKSKLLGKKQMIENEVNILRSVNHPNIIKLLD 442
Q IG G F V + ++ A+K I Q E +++ + H N+++LL
Sbjct: 18 QTIGKGEFGDV--MLGDYRGNKVAVKCIKND---ATAQAFLAEASVMTQLRHSNLVQLLG 72
Query: 443 E-YDTNNELYLVIELIKGGDLFDAI---SKNVKFSEEDSKFMTQSLASALSYLHDNYIVH 498
+ LY+V E + G L D + ++V + KF + + A+ YL N VH
Sbjct: 73 VIVEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKF-SLDVCEAMEYLEGNNFVH 131
Query: 499 RDIKPENLLVEMSGCHVKVLKVGDFGLAQRVLRPMFTVCGTPTYVAPEILNESGYGVKID 558
RD+ N+LV V KV DFGL + T + APE L E+ + K D
Sbjct: 132 RDLAARNVLVSED----NVAKVSDFGLTKEASSTQDTGKLPVKWTAPEALREAAFSTKSD 187
Query: 559 VWAAGVILY 567
VW+ G++L+
Sbjct: 188 VWSFGILLW 196
>pdb|3IO7|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3IOK|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3KCK|A Chain A, A Novel Chemotype Of Kinase Inhibitors
Length = 313
Score = 69.3 bits (168), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 62/208 (29%), Positives = 97/208 (46%), Gaps = 32/208 (15%)
Query: 383 QIIGDGNFAVVRQV-YDKHKDMDCALKIIDKSKLLGKKQM--IENEVNILRSVNHPNIIK 439
Q +G GNF V YD +D + + K + ++ + E E+ IL+S+ H NI+K
Sbjct: 34 QQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVK 93
Query: 440 LLDE-YDTNNE-LYLVIELIKGGDLFDAISKNVKFSEEDSKFM--TQSLASALSYLHDNY 495
Y L L++E + G L D + K+ K + K + T + + YL
Sbjct: 94 YKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKH-KERIDHIKLLQYTSQICKGMEYLGTKR 152
Query: 496 IVHRDIKPENLLVEMSGCHVKVLKVGDFGLAQRVLR-------------PMFTVCGTPTY 542
+HRD+ N+LVE + +K+GDFGL + + + P+F +
Sbjct: 153 YIHRDLATRNILVE----NENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIF-------W 201
Query: 543 VAPEILNESGYGVKIDVWAAGVILYILL 570
APE L ES + V DVW+ GV+LY L
Sbjct: 202 YAPESLTESKFSVASDVWSFGVVLYELF 229
>pdb|2X9E|A Chain A, Human Mps1 In Complex With Nms-P715
Length = 317
Score = 69.3 bits (168), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 78/282 (27%), Positives = 135/282 (47%), Gaps = 37/282 (13%)
Query: 379 YSVGQIIGDGNFAVVRQVYDKHKDMDCALKIIDKSKLLGKKQMIE---NEVNILRSVNHP 435
YS+ + IG G + V QV ++ K + A+K ++ + Q ++ NE+ L +
Sbjct: 14 YSILKQIGSGGSSKVFQVLNEKKQI-YAIKYVNLEE--ADNQTLDSYRNEIAYLNKLQQH 70
Query: 436 N--IIKLLDEYDTNNELYLVIELIKGGDLFDAISKNVKFSEEDSKFMTQSLASALSYLHD 493
+ II+L D T+ +Y+V+E DL + K + K +++ A+ +H
Sbjct: 71 SDKIIRLYDYEITDQYIYMVMEC-GNIDLNSWLKKKKSIDPWERKSYWKNMLEAVHTIHQ 129
Query: 494 NYIVHRDIKPENLLVEMSGCHVKVLKVGDFGLAQRVLRPMFTV-----CGTPTYVAPEIL 548
+ IVH D+KP N L+ + G +LK+ DFG+A ++ +V GT Y+ PE +
Sbjct: 130 HGIVHSDLKPANFLI-VDG----MLKLIDFGIANQMQPDTTSVVKDSQVGTVNYMPPEAI 184
Query: 549 N------ESG-----YGVKIDVWAAGVILYILLCGFPPFVSDTNDQDELFDDI-LSGQYG 596
E+G K DVW+ G ILY + G PF N +L I + +
Sbjct: 185 KDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQISKLHAIIDPNHEIE 244
Query: 597 FPSPYWDDISE-EAKELISHMLESNPDLRFSAEDVLDHPWLE 637
FP DI E + ++++ L+ +P R S ++L HP+++
Sbjct: 245 FP-----DIPEKDLQDVLKCCLKRDPKQRISIPELLAHPYVQ 281
>pdb|3CEK|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(ttk)
pdb|3GFW|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(Ttk) In Complex With A Pyrolo-Pyridin Ligand
Length = 313
Score = 69.3 bits (168), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 78/282 (27%), Positives = 135/282 (47%), Gaps = 37/282 (13%)
Query: 379 YSVGQIIGDGNFAVVRQVYDKHKDMDCALKIIDKSKLLGKKQMIE---NEVNILRSVNHP 435
YS+ + IG G + V QV ++ K + A+K ++ + Q ++ NE+ L +
Sbjct: 30 YSILKQIGSGGSSKVFQVLNEKKQI-YAIKYVNLEE--ADNQTLDSYRNEIAYLNKLQQH 86
Query: 436 N--IIKLLDEYDTNNELYLVIELIKGGDLFDAISKNVKFSEEDSKFMTQSLASALSYLHD 493
+ II+L D T+ +Y+V+E DL + K + K +++ A+ +H
Sbjct: 87 SDKIIRLYDYEITDQYIYMVMEC-GNIDLNSWLKKKKSIDPWERKSYWKNMLEAVHTIHQ 145
Query: 494 NYIVHRDIKPENLLVEMSGCHVKVLKVGDFGLAQRVLRPMFTV-----CGTPTYVAPEIL 548
+ IVH D+KP N L+ + G +LK+ DFG+A ++ +V GT Y+ PE +
Sbjct: 146 HGIVHSDLKPANFLI-VDG----MLKLIDFGIANQMQPDTTSVVKDSQVGTVNYMPPEAI 200
Query: 549 N------ESG-----YGVKIDVWAAGVILYILLCGFPPFVSDTNDQDELFDDI-LSGQYG 596
E+G K DVW+ G ILY + G PF N +L I + +
Sbjct: 201 KDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQISKLHAIIDPNHEIE 260
Query: 597 FPSPYWDDISE-EAKELISHMLESNPDLRFSAEDVLDHPWLE 637
FP DI E + ++++ L+ +P R S ++L HP+++
Sbjct: 261 FP-----DIPEKDLQDVLKCCLKRDPKQRISIPELLAHPYVQ 297
>pdb|2ZMC|A Chain A, Crystal Structure Of Human Mitotic Checkpoint Kinase Mps1
Catalytic Domain Apo Form
Length = 390
Score = 69.3 bits (168), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 78/282 (27%), Positives = 135/282 (47%), Gaps = 37/282 (13%)
Query: 379 YSVGQIIGDGNFAVVRQVYDKHKDMDCALKIIDKSKLLGKKQMIE---NEVNILRSVNHP 435
YS+ + IG G + V QV ++ K + A+K ++ + Q ++ NE+ L +
Sbjct: 58 YSILKQIGSGGSSKVFQVLNEKKQI-YAIKYVNLEE--ADNQTLDSYRNEIAYLNKLQQH 114
Query: 436 N--IIKLLDEYDTNNELYLVIELIKGGDLFDAISKNVKFSEEDSKFMTQSLASALSYLHD 493
+ II+L D T+ +Y+V+E DL + K + K +++ A+ +H
Sbjct: 115 SDKIIRLYDYEITDQYIYMVMEC-GNIDLNSWLKKKKSIDPWERKSYWKNMLEAVHTIHQ 173
Query: 494 NYIVHRDIKPENLLVEMSGCHVKVLKVGDFGLAQRVLRPMFTV-----CGTPTYVAPEIL 548
+ IVH D+KP N L+ + G +LK+ DFG+A ++ +V GT Y+ PE +
Sbjct: 174 HGIVHSDLKPANFLI-VDG----MLKLIDFGIANQMQPDTTSVVKDSQVGTVNYMPPEAI 228
Query: 549 N------ESG-----YGVKIDVWAAGVILYILLCGFPPFVSDTNDQDELFDDI-LSGQYG 596
E+G K DVW+ G ILY + G PF N +L I + +
Sbjct: 229 KDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQISKLHAIIDPNHEIE 288
Query: 597 FPSPYWDDISE-EAKELISHMLESNPDLRFSAEDVLDHPWLE 637
FP DI E + ++++ L+ +P R S ++L HP+++
Sbjct: 289 FP-----DIPEKDLQDVLKCCLKRDPKQRISIPELLAHPYVQ 325
>pdb|3VQU|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With 4- [(4-Amino-5-Cyano-6-Ethoxypyridin-2-
Yl)amino]benzamide
Length = 320
Score = 69.3 bits (168), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 78/282 (27%), Positives = 135/282 (47%), Gaps = 37/282 (13%)
Query: 379 YSVGQIIGDGNFAVVRQVYDKHKDMDCALKIIDKSKLLGKKQMIE---NEVNILRSVNHP 435
YS+ + IG G + V QV ++ K + A+K ++ + Q ++ NE+ L +
Sbjct: 10 YSILKQIGSGGSSKVFQVLNEKKQI-YAIKYVNLEE--ADNQTLDSYRNEIAYLNKLQQH 66
Query: 436 N--IIKLLDEYDTNNELYLVIELIKGGDLFDAISKNVKFSEEDSKFMTQSLASALSYLHD 493
+ II+L D T+ +Y+V+E DL + K + K +++ A+ +H
Sbjct: 67 SDKIIRLYDYEITDQYIYMVMEC-GNIDLNSWLKKKKSIDPWERKSYWKNMLEAVHTIHQ 125
Query: 494 NYIVHRDIKPENLLVEMSGCHVKVLKVGDFGLAQRVLRPMFTV-----CGTPTYVAPEIL 548
+ IVH D+KP N L+ + G +LK+ DFG+A ++ +V GT Y+ PE +
Sbjct: 126 HGIVHSDLKPANFLI-VDG----MLKLIDFGIANQMQPDTTSVVKDSQVGTVNYMPPEAI 180
Query: 549 N------ESG-----YGVKIDVWAAGVILYILLCGFPPFVSDTNDQDELFDDI-LSGQYG 596
E+G K DVW+ G ILY + G PF N +L I + +
Sbjct: 181 KDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQISKLHAIIDPNHEIE 240
Query: 597 FPSPYWDDISE-EAKELISHMLESNPDLRFSAEDVLDHPWLE 637
FP DI E + ++++ L+ +P R S ++L HP+++
Sbjct: 241 FP-----DIPEKDLQDVLKCCLKRDPKQRISIPELLAHPYVQ 277
>pdb|3A4O|X Chain X, Lyn Kinase Domain
Length = 286
Score = 69.3 bits (168), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 53/209 (25%), Positives = 96/209 (45%), Gaps = 24/209 (11%)
Query: 385 IGDGNFAVVRQVYDKHKDMDCALKIIDKSKLLGKKQMIENEVNILRSVNHPNIIKLLDEY 444
+G G F V Y + A+K + + Q E N+++++ H +++L
Sbjct: 21 LGAGQFGEVWMGY-YNNSTKVAVKTLKPGTM--SVQAFLEEANLMKTLQHDKLVRLYAVV 77
Query: 445 DTNNELYLVIELIKGGDLFDAISKNVKFSEEDSKFM-------TQSLASALSYLHDNYIV 497
+Y++ E + G L D + S+E K + + +A ++Y+ +
Sbjct: 78 TREEPIYIITEYMAKGSLLDFLK-----SDEGGKVLLPKLIDFSAQIAEGMAYIERKNYI 132
Query: 498 HRDIKPENLLVEMSGCHVKVLKVGDFGLAQRVLRPMFTV---CGTPT-YVAPEILNESGY 553
HRD++ N+LV S + K+ DFGLA+ + +T P + APE +N +
Sbjct: 133 HRDLRAANVLVSES----LMCKIADFGLARVIEDNEYTAREGAKFPIKWTAPEAINFGCF 188
Query: 554 GVKIDVWAAGVILY-ILLCGFPPFVSDTN 581
+K DVW+ G++LY I+ G P+ TN
Sbjct: 189 TIKSDVWSFGILLYEIVTYGKIPYPGRTN 217
>pdb|2REI|A Chain A, Kinase Domain Of Human Ephrin Type-a Receptor 7 (epha7)
pdb|3DKO|A Chain A, Complex Between The Kinase Domain Of Human Ephrin Type-A
Receptor 7 (Epha7) And Inhibitor Alw-Ii-49-7
Length = 318
Score = 68.9 bits (167), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 62/230 (26%), Positives = 110/230 (47%), Gaps = 20/230 (8%)
Query: 383 QIIGDGNFAVV---RQVYDKHKDMDCALKIIDKSKLLGKKQMIENEVNILRSVNHPNIIK 439
++IG G F V R +D+ A+K + +++ E +I+ +HPN++
Sbjct: 49 RVIGAGEFGEVCSGRLKLPGKRDVAVAIKTLKVGYTEKQRRDFLCEASIMGQFDHPNVVH 108
Query: 440 LLDEYDTNNELYLVIELIKGGDLFDAISK-NVKFSEEDSKFMTQSLASALSYLHDNYIVH 498
L + +VIE ++ G L + K + +F+ M + +A+ + YL D VH
Sbjct: 109 LEGVVTRGKPVMIVIEFMENGALDAFLRKHDGQFTVIQLVGMLRGIAAGMRYLADMGYVH 168
Query: 499 RDIKPENLLVEMSGCHVKVLKVGDFGLAQRVL----RPMFTVCGTPT---YVAPEILNES 551
RD+ N+LV + V KV DFGL+ RV+ ++T G + APE +
Sbjct: 169 RDLAARNILVNSN----LVCKVSDFGLS-RVIEDDPEAVYTTTGGKIPVRWTAPEAIQYR 223
Query: 552 GYGVKIDVWAAGVILY-ILLCGFPPFVSDTNDQDELFDDILSGQYGFPSP 600
+ DVW+ G++++ ++ G P+ D ++QD + I G Y P+P
Sbjct: 224 KFTSASDVWSYGIVMWEVMSYGERPY-WDMSNQD-VIKAIEEG-YRLPAP 270
>pdb|2WTK|B Chain B, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
pdb|2WTK|E Chain E, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
Length = 373
Score = 68.9 bits (167), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 67/272 (24%), Positives = 111/272 (40%), Gaps = 58/272 (21%)
Query: 421 MIENEVNILRSVNHPNIIKLLDEYDTNNELYLVIELIKGGDLFDAISKNV--KFSEEDSK 478
++ E+++ + NHPNI+ + +NEL++V + G D I + +E
Sbjct: 56 FLQGELHVSKLFNHPNIVPYRATFIADNELWVVTSFMAYGSAKDLICTHFMDGMNELAIA 115
Query: 479 FMTQSLASALSYLHDNYIVHRDIKPENLLVEMSGCHVKVLKVG--------DFGLAQRVL 530
++ Q + AL Y+H VHR +K ++L+ + G KV G G QRV+
Sbjct: 116 YILQGVLKALDYIHHMGYVHRSVKASHILISVDG---KVYLSGLRSNLSMISHGQRQRVV 172
Query: 531 R--PMFTVCGTPTYVAPEIL--NESGYGVKIDVWAAGVILYILLCGFPPFV--------- 577
P ++V P +++PE+L N GY K D+++ G+ L G PF
Sbjct: 173 HDFPKYSVKVLP-WLSPEVLQQNLQGYDAKSDIYSVGITACELANGHVPFKDMPATQMLL 231
Query: 578 ------------SDTNDQDEL------------FDDILSGQYGFPS-------PYWDDIS 606
+ T +EL D L+ PS PY S
Sbjct: 232 EKLNGTVPCLLDTSTIPAEELTMSPSRSVANSGLSDSLTTSTPRPSNGDSPSHPYHRTFS 291
Query: 607 EEAKELISHMLESNPDLRFSAEDVLDHPWLER 638
+ L+ NPD R SA +L+H + ++
Sbjct: 292 PHFHHFVEQCLQRNPDARPSASTLLNHSFFKQ 323
>pdb|3GNI|B Chain B, Structure Of Strad And Mo25
Length = 389
Score = 68.9 bits (167), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 67/271 (24%), Positives = 111/271 (40%), Gaps = 58/271 (21%)
Query: 422 IENEVNILRSVNHPNIIKLLDEYDTNNELYLVIELIKGGDLFDAISKNV--KFSEEDSKF 479
++ E+++ + NHPNI+ + +NEL++V + G D I + +E +
Sbjct: 73 LQGELHVSKLFNHPNIVPYRATFIADNELWVVTSFMAYGSAKDLICTHFMDGMNELAIAY 132
Query: 480 MTQSLASALSYLHDNYIVHRDIKPENLLVEMSGCHVKVLKVG--------DFGLAQRVLR 531
+ Q + AL Y+H VHR +K ++L+ + G KV G G QRV+
Sbjct: 133 ILQGVLKALDYIHHMGYVHRSVKASHILISVDG---KVYLSGLRSNLSMISHGQRQRVVH 189
Query: 532 --PMFTVCGTPTYVAPEIL--NESGYGVKIDVWAAGVILYILLCGFPPFV---------- 577
P ++V P +++PE+L N GY K D+++ G+ L G PF
Sbjct: 190 DFPKYSVKVLP-WLSPEVLQQNLQGYDAKSDIYSVGITACELANGHVPFKDMPATQMLLE 248
Query: 578 -----------SDTNDQDEL------------FDDILSGQYGFPS-------PYWDDISE 607
+ T +EL D L+ PS PY S
Sbjct: 249 KLNGTVPCLLDTSTIPAEELTMSPSRSVANSGLSDSLTTSTPRPSNGDSPSHPYHRTFSP 308
Query: 608 EAKELISHMLESNPDLRFSAEDVLDHPWLER 638
+ L+ NPD R SA +L+H + ++
Sbjct: 309 HFHHFVEQCLQRNPDARPSASTLLNHSFFKQ 339
>pdb|3KUL|B Chain B, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 68.9 bits (167), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 63/235 (26%), Positives = 109/235 (46%), Gaps = 20/235 (8%)
Query: 378 RYSVGQIIGDGNFAVV---RQVYDKHKDMDCALKIIDKSKLLGKKQMIENEVNILRSVNH 434
R + +IIG G+ V R +D+ A+K + +++ +E +I+ +H
Sbjct: 50 RIHIEKIIGSGDSGEVCYGRLRVPGQRDVPVAIKALKAGYTERQRRDFLSEASIMGQFDH 109
Query: 435 PNIIKLLDEYDTNNELYLVIELIKGGDLFDAI-SKNVKFSEEDSKFMTQSLASALSYLHD 493
PNII+L +V E ++ G L + + + +F+ M + + + + YL D
Sbjct: 110 PNIIRLEGVVTRGRLAMIVTEYMENGSLDTFLRTHDGQFTIMQLVGMLRGVGAGMRYLSD 169
Query: 494 NYIVHRDIKPENLLVEMSGCHVKVLKVGDFGLAQRVLRPMFTVCGTPT-------YVAPE 546
VHRD+ N+LV+ + V KV DFGL+ RVL T T + APE
Sbjct: 170 LGYVHRDLAARNVLVDSN----LVCKVSDFGLS-RVLEDDPDAAXTTTGGKIPIRWTAPE 224
Query: 547 ILNESGYGVKIDVWAAGVILY-ILLCGFPPFVSDTNDQDELFDDILSGQYGFPSP 600
+ + DVW+ GV+++ +L G P+ + TN ++ + G Y P+P
Sbjct: 225 AIAFRTFSSASDVWSFGVVMWEVLAYGERPYWNMTN--RDVISSVEEG-YRLPAP 276
>pdb|2DYL|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 7 Activated Mutant (S287d, T291d)
Length = 318
Score = 68.9 bits (167), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 56/227 (24%), Positives = 110/227 (48%), Gaps = 30/227 (13%)
Query: 428 ILRSVNHPNIIKLLDEYDTNNELYLVIELIKGGDLFDAISKNVK--FSEEDSKFMTQSLA 485
+L+S + P I++ + TN ++++ +EL+ G + + K ++ E MT ++
Sbjct: 77 VLKSHDCPYIVQCFGTFITNTDVFIAMELM--GTCAEKLKKRMQGPIPERILGKMTVAIV 134
Query: 486 SALSYLHDNY-IVHRDIKPENLLVEMSGCHVKVLKVGDFGLAQRVL--RPMFTVCGTPTY 542
AL YL + + ++HRD+KP N+L++ G +K+ DFG++ R++ + G Y
Sbjct: 135 KALYYLKEKHGVIHRDVKPSNILLDERG----QIKLCDFGISGRLVDDKAKDRSAGCAAY 190
Query: 543 VAPEILN-----ESGYGVKIDVWAAGVILYILLCGFPPFVSDTNDQDELFD------DIL 591
+APE ++ + Y ++ DVW+ G+ L L G P+ + D + L +L
Sbjct: 191 MAPERIDPPDPTKPDYDIRADVWSLGISLVELATGQFPYKNCKTDFEVLTKVLQEEPPLL 250
Query: 592 SGQYGFPSPYWDDISEEAKELISHMLESNPDLRFSAEDVLDHPWLER 638
G GF S + + + L + R +L+H +++R
Sbjct: 251 PGHMGF--------SGDFQSFVKDCLTKDHRKRPKYNKLLEHSFIKR 289
>pdb|2XA4|A Chain A, Inhibitors Of Jak2 Kinase Domain
pdb|2XA4|B Chain B, Inhibitors Of Jak2 Kinase Domain
Length = 298
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 60/219 (27%), Positives = 100/219 (45%), Gaps = 31/219 (14%)
Query: 372 PSKLLQRY-SVGQIIGDGNFAVVRQV-YDKHKDMDCALKIIDKSKLLGKKQM--IENEVN 427
P++ +R+ Q +G GNF V YD +D + + K + ++ + E E+
Sbjct: 7 PTQFEERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIE 66
Query: 428 ILRSVNHPNIIKL--LDEYDTNNELYLVIELIKGGDLFDAISKNVKFSEEDSKFM-TQSL 484
IL+S+ H NI+K + L L++E + G L D + + + + T +
Sbjct: 67 ILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQAHAERIDHIKLLQYTSQI 126
Query: 485 ASALSYLHDNYIVHRDIKPENLLVEMSGCHVKVLKVGDFGLAQRVLR------------- 531
+ YL +HRD+ N+LVE + +K+GDFGL + + +
Sbjct: 127 CKGMEYLGTKRYIHRDLATRNILVE----NENRVKIGDFGLTKVLPQDKEXXKVKEPGES 182
Query: 532 PMFTVCGTPTYVAPEILNESGYGVKIDVWAAGVILYILL 570
P+F + APE L ES + V DVW+ GV+LY L
Sbjct: 183 PIF-------WYAPESLTESKFSVASDVWSFGVVLYELF 214
>pdb|4E1Z|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 291
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 56/205 (27%), Positives = 94/205 (45%), Gaps = 31/205 (15%)
Query: 385 IGDGNFAVVR-QVYDKHKDMDCALKIIDKSKLLGKKQM---IENEVNILRSVNHPNIIKL 440
+G+G+F V YD D + + K Q+ + E+ ILR++ H +I+K
Sbjct: 17 LGEGHFGKVSLYCYDPTNDGTGEMVAVKALKEGCGPQLRSGWQREIEILRTLYHEHIVKY 76
Query: 441 LDEYDTNNE--LYLVIELIKGGDLFDAISKNVKFSEEDSKFMTQSLASALSYLHDNYIVH 498
+ E + LV+E + G L D + ++ + F Q + ++YLH + +H
Sbjct: 77 KGCCEDQGEKSVQLVMEYVPLGSLRDYLPRHCVGLAQLLLF-AQQICEGMAYLHAQHYIH 135
Query: 499 RDIKPENLLVEMSGCHVKVLKVGDFGLAQRVLR-------------PMFTVCGTPTYVAP 545
R + N+L++ +++K+GDFGLA+ V P+F + AP
Sbjct: 136 RALAARNVLLDND----RLVKIGDFGLAKAVPEGHEYYRVREDGDSPVF-------WYAP 184
Query: 546 EILNESGYGVKIDVWAAGVILYILL 570
E L E + DVW+ GV LY LL
Sbjct: 185 ECLKECKFYYASDVWSFGVTLYELL 209
>pdb|3DKG|A Chain A, Sgx Clone 5698a109kfg1h1
Length = 317
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 61/226 (26%), Positives = 106/226 (46%), Gaps = 20/226 (8%)
Query: 372 PSKLLQRYSVGQIIGDGNFAVVRQ---VYDKHKDMDCALKIIDKSKLLGKKQMIENEVNI 428
PS L+ ++ ++IG G+F V + + K + CA+K +++ +G+ E I
Sbjct: 28 PSSLIVHFN--EVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGII 85
Query: 429 LRSVNHPNIIKLLDE-YDTNNELYLVIELIKGGDLFDAISKNVKF-SEEDSKFMTQSLAS 486
++ +HPN++ LL + +V+ +K GDL + I + +D +A
Sbjct: 86 MKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAK 145
Query: 487 ALSYLHDNYIVHRDIKPENLLVEMSGCHVKVLKVGDFGLAQRVLRPMFTVCGTPT----- 541
+ +L VHRD+ N +++ +KV DFGLA+ +L F T
Sbjct: 146 GMKFLASKKFVHRDLAARNCMLDEK----FTVKVADFGLARDMLDKEFDSVHNKTGAKLP 201
Query: 542 --YVAPEILNESGYGVKIDVWAAGVILYILLC-GFPPFVSDTNDQD 584
++A E L + K DVW+ GV+L+ L+ G PP+ D N D
Sbjct: 202 VKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPY-PDVNTFD 246
>pdb|2IVV|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Pp1
Length = 314
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 69/285 (24%), Positives = 127/285 (44%), Gaps = 44/285 (15%)
Query: 381 VGQIIGDGNFAVVRQVYDKHKD-----MDCALKIIDKSKLLGKKQMIENEVNILRSVNHP 435
+G+ +G+G F V + H A+K++ ++ + + + +E N+L+ VNHP
Sbjct: 27 LGKTLGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENASPSELRDLLSEFNVLKQVNHP 86
Query: 436 NIIKLLDEYDTNNELYLVIELIKGGDLFDAISKNVK----------------FSEEDSKF 479
++IKL + L L++E K G L + ++ K D +
Sbjct: 87 HVIKLYGACSQDGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHPDERA 146
Query: 480 MTQS--------LASALSYLHDNYIVHRDIKPENLLVEMSGCHVKVLKVGDFGLAQRVLR 531
+T ++ + YL + +VHRD+ N+LV + +K+ DFGL++ V
Sbjct: 147 LTMGDLISFAWQISQGMQYLAEMSLVHRDLAARNILV----AEGRKMKISDFGLSRDVYE 202
Query: 532 PMFTVCGTP-----TYVAPEILNESGYGVKIDVWAAGVILY-ILLCGFPPFVSDTNDQDE 585
V + ++A E L + Y + DVW+ GV+L+ I+ G P+ ++
Sbjct: 203 EDSXVKRSQGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVTLGGNPYPGIPPER-- 260
Query: 586 LFDDILSGQYGFPSPYWDDISEEAKELISHMLESNPDLRFSAEDV 630
LF+ + +G + P D+ SEE L+ + PD R D+
Sbjct: 261 LFNLLKTG-HRMERP--DNCSEEMYRLMLQCWKQEPDKRPVFADI 302
>pdb|2IVT|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain
pdb|2IVU|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Zd6474
pdb|2X2K|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2L|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|B Chain B, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
Length = 314
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 69/285 (24%), Positives = 127/285 (44%), Gaps = 44/285 (15%)
Query: 381 VGQIIGDGNFAVVRQVYDKHKD-----MDCALKIIDKSKLLGKKQMIENEVNILRSVNHP 435
+G+ +G+G F V + H A+K++ ++ + + + +E N+L+ VNHP
Sbjct: 27 LGKTLGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENASPSELRDLLSEFNVLKQVNHP 86
Query: 436 NIIKLLDEYDTNNELYLVIELIKGGDLFDAISKNVK----------------FSEEDSKF 479
++IKL + L L++E K G L + ++ K D +
Sbjct: 87 HVIKLYGACSQDGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHPDERA 146
Query: 480 MTQS--------LASALSYLHDNYIVHRDIKPENLLVEMSGCHVKVLKVGDFGLAQRVLR 531
+T ++ + YL + +VHRD+ N+LV + +K+ DFGL++ V
Sbjct: 147 LTMGDLISFAWQISQGMQYLAEMKLVHRDLAARNILV----AEGRKMKISDFGLSRDVYE 202
Query: 532 PMFTVCGTP-----TYVAPEILNESGYGVKIDVWAAGVILY-ILLCGFPPFVSDTNDQDE 585
V + ++A E L + Y + DVW+ GV+L+ I+ G P+ ++
Sbjct: 203 EDSXVKRSQGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVTLGGNPYPGIPPER-- 260
Query: 586 LFDDILSGQYGFPSPYWDDISEEAKELISHMLESNPDLRFSAEDV 630
LF+ + +G + P D+ SEE L+ + PD R D+
Sbjct: 261 LFNLLKTG-HRMERP--DNCSEEMYRLMLQCWKQEPDKRPVFADI 302
>pdb|3H9F|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(Ttk) In Complex With A Pyrimido-Diazepin Ligand
Length = 313
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 78/282 (27%), Positives = 134/282 (47%), Gaps = 37/282 (13%)
Query: 379 YSVGQIIGDGNFAVVRQVYDKHKDMDCALKIIDKSKLLGKKQMIE---NEVNILRSVNHP 435
YS+ + IG G + V QV ++ K + A+K ++ + Q ++ NE+ L +
Sbjct: 30 YSILKQIGSGGSSKVFQVLNEKKQI-YAIKYVNLEE--ADNQTLDSYRNEIAYLNKLQQH 86
Query: 436 N--IIKLLDEYDTNNELYLVIELIKGGDLFDAISKNVKFSEEDSKFMTQSLASALSYLHD 493
+ II+L D T+ +Y+V+E DL + K + K +++ A+ +H
Sbjct: 87 SDKIIRLYDYEITDQYIYMVMEC-GNIDLNSWLKKKKSIDPWERKSYWKNMLEAVHTIHQ 145
Query: 494 NYIVHRDIKPENLLVEMSGCHVKVLKVGDFGLAQRVLRPMFTV-----CGTPTYVAPEIL 548
+ IVH D+KP N L+ + G +LK+ DFG+A ++ V GT Y+ PE +
Sbjct: 146 HGIVHSDLKPANFLI-VDG----MLKLIDFGIANQMQPDXXXVVKDSQVGTVNYMPPEAI 200
Query: 549 N------ESG-----YGVKIDVWAAGVILYILLCGFPPFVSDTNDQDELFDDI-LSGQYG 596
E+G K DVW+ G ILY + G PF N +L I + +
Sbjct: 201 KDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQISKLHAIIDPNHEIE 260
Query: 597 FPSPYWDDISE-EAKELISHMLESNPDLRFSAEDVLDHPWLE 637
FP DI E + ++++ L+ +P R S ++L HP+++
Sbjct: 261 FP-----DIPEKDLQDVLKCCLKRDPKQRISIPELLAHPYVQ 297
>pdb|4E20|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 290
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 56/205 (27%), Positives = 94/205 (45%), Gaps = 31/205 (15%)
Query: 385 IGDGNFAVVR-QVYDKHKDMDCALKIIDKSKLLGKKQM---IENEVNILRSVNHPNIIKL 440
+G+G+F V YD D + + K Q+ + E+ ILR++ H +I+K
Sbjct: 16 LGEGHFGKVSLYCYDPTNDGTGEMVAVKALKEGCGPQLRSGWQREIEILRTLYHEHIVKY 75
Query: 441 LDEYDTNNE--LYLVIELIKGGDLFDAISKNVKFSEEDSKFMTQSLASALSYLHDNYIVH 498
+ E + LV+E + G L D + ++ + F Q + ++YLH + +H
Sbjct: 76 KGCCEDQGEKSVQLVMEYVPLGSLRDYLPRHCVGLAQLLLF-AQQICEGMAYLHAQHYIH 134
Query: 499 RDIKPENLLVEMSGCHVKVLKVGDFGLAQRVLR-------------PMFTVCGTPTYVAP 545
R + N+L++ +++K+GDFGLA+ V P+F + AP
Sbjct: 135 RALAARNVLLDND----RLVKIGDFGLAKAVPEGHEYYRVREDGDSPVF-------WYAP 183
Query: 546 EILNESGYGVKIDVWAAGVILYILL 570
E L E + DVW+ GV LY LL
Sbjct: 184 ECLKECKFYYASDVWSFGVTLYELL 208
>pdb|4BBE|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
Length = 298
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 64/214 (29%), Positives = 105/214 (49%), Gaps = 21/214 (9%)
Query: 372 PSKLLQRY-SVGQIIGDGNFAVVRQV-YDKHKDMDCALKIIDKSKLLGKKQM--IENEVN 427
P++ +R+ Q +G GNF V YD +D + + K + ++ + E E+
Sbjct: 5 PTQFEERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIE 64
Query: 428 ILRSVNHPNIIKL--LDEYDTNNELYLVIELIKGGDLFDAISKNVKFSEEDSKFM--TQS 483
IL+S+ H NI+K + L L++E + G L D + K+ K + K + T
Sbjct: 65 ILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKH-KERIDHIKLLQYTSQ 123
Query: 484 LASALSYLHDNYIVHRDIKPENLLVEMSGCHVKVLKVGDFGLAQRVL---RPMFTV---C 537
+ + YL +HR++ N+LVE + +K+GDFGL +VL + + V
Sbjct: 124 ICKGMEYLGTKRYIHRNLATRNILVE----NENRVKIGDFGLT-KVLPQDKEYYKVKEPG 178
Query: 538 GTPT-YVAPEILNESGYGVKIDVWAAGVILYILL 570
+P + APE L ES + V DVW+ GV+LY L
Sbjct: 179 ESPIFWYAPESLTESKFSVASDVWSFGVVLYELF 212
>pdb|2I1M|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With An
Arylamide Inhibitor
Length = 333
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 58/236 (24%), Positives = 108/236 (45%), Gaps = 33/236 (13%)
Query: 367 ENLNIPSKLLQRYSVGQIIGDGNFAVVRQV--YDKHKD---MDCALKIIDKSKLLGKKQM 421
E P LQ G+ +G G F V + + K+ + A+K++ + +K+
Sbjct: 39 EKWEFPRNNLQ---FGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEA 95
Query: 422 IENEVNILRSVN-HPNIIKLLDEYDTNNELYLVIELIKGGDLFDAISKNVKFSEEDSKF- 479
+ +E+ I+ + H NI+ LL + ++ E GDL + + + + E D F
Sbjct: 96 LMSELKIMSHLGQHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKSRVLETDPAFA 155
Query: 480 -------------MTQSLASALSYLHDNYIVHRDIKPENLLVEMSGCHVKVLKVGDFGLA 526
+ +A +++L +HRD+ N+L ++ HV K+GDFGLA
Sbjct: 156 IANSTASTRDLLHFSSQVAQGMAFLASKNCIHRDVAARNVL--LTNGHVA--KIGDFGLA 211
Query: 527 QRVLR-PMFTVCGTP----TYVAPEILNESGYGVKIDVWAAGVILY-ILLCGFPPF 576
+ ++ + V G ++APE + + Y V+ DVW+ G++L+ I G P+
Sbjct: 212 RDIMNDSNYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFSLGLNPY 267
>pdb|4HVD|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-1,2,2-trimethyl-propyl)-amide
pdb|4HVG|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-2-hydroxy-1,2-dimethyl-propyl)- Amide
pdb|4HVH|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-2-hydroxy-1,2-dimethyl-propyl
pdb|4HVI|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-1-methyl-2-oxo-2-piperidin-1-yl- Ethyl)-amide
Length = 314
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 60/200 (30%), Positives = 95/200 (47%), Gaps = 20/200 (10%)
Query: 385 IGDGNFAVVRQV-YDKHKDMDCALKIIDKSKLLGKKQM--IENEVNILRSVNHPNIIKLL 441
+G GNF V YD D AL + + + G Q + E+ IL++++ I+K
Sbjct: 18 LGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQILKALHSDFIVKYR 77
Query: 442 D-EYDTNNE-LYLVIELIKGGDLFDAISKN-VKFSEEDSKFMTQSLASALSYLHDNYIVH 498
Y + L LV+E + G L D + ++ + + + + YL VH
Sbjct: 78 GVSYGPGRQSLRLVMEYLPSGCLRDFLQRHRARLDASRLLLYSSQICKGMEYLGSRRCVH 137
Query: 499 RDIKPENLLVEMSGCHVKVLKVGDFGLAQRVLRPM---FTVCGTPT-----YVAPEILNE 550
RD+ N+LVE S HVK+ DFGLA+ L P+ + V P + APE L++
Sbjct: 138 RDLAARNILVE-SEAHVKI---ADFGLAK--LLPLDKDYYVVREPGQSPIFWYAPESLSD 191
Query: 551 SGYGVKIDVWAAGVILYILL 570
+ + + DVW+ GV+LY L
Sbjct: 192 NIFSRQSDVWSFGVVLYELF 211
>pdb|3BEA|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With A
Pyrimidinopyridone Inhibitor
Length = 333
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 58/236 (24%), Positives = 108/236 (45%), Gaps = 33/236 (13%)
Query: 367 ENLNIPSKLLQRYSVGQIIGDGNFAVVRQV--YDKHKD---MDCALKIIDKSKLLGKKQM 421
E P LQ G+ +G G F V + + K+ + A+K++ + +K+
Sbjct: 39 EKWEFPRNNLQ---FGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEA 95
Query: 422 IENEVNILRSVN-HPNIIKLLDEYDTNNELYLVIELIKGGDLFDAISKNVKFSEEDSKF- 479
+ +E+ I+ + H NI+ LL + ++ E GDL + + + + E D F
Sbjct: 96 LMSELKIMSHLGQHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKSRVLETDPAFA 155
Query: 480 -------------MTQSLASALSYLHDNYIVHRDIKPENLLVEMSGCHVKVLKVGDFGLA 526
+ +A +++L +HRD+ N+L ++ HV K+GDFGLA
Sbjct: 156 IANSTLSTRDLLHFSSQVAQGMAFLASKNCIHRDVAARNVL--LTNGHVA--KIGDFGLA 211
Query: 527 QRVLR-PMFTVCGTP----TYVAPEILNESGYGVKIDVWAAGVILY-ILLCGFPPF 576
+ ++ + V G ++APE + + Y V+ DVW+ G++L+ I G P+
Sbjct: 212 RDIMNDSNYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFSLGLNPY 267
>pdb|2R2P|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 5 (Epha5)
Length = 295
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 62/233 (26%), Positives = 109/233 (46%), Gaps = 20/233 (8%)
Query: 380 SVGQIIGDGNFAVV---RQVYDKHKDMDCALKIIDKSKLLGKKQMIENEVNILRSVNHPN 436
++ ++IG G F V R +++ A+K + +++ E +I+ +HPN
Sbjct: 25 TIERVIGAGEFGEVCSGRLKLPGKRELPVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPN 84
Query: 437 IIKLLDEYDTNNELYLVIELIKGGDLFDAISKN-VKFSEEDSKFMTQSLASALSYLHDNY 495
II L + + +V E ++ G L + KN +F+ M + +++ + YL D
Sbjct: 85 IIHLEGVVTKSKPVMIVTEYMENGSLDTFLKKNDGQFTVIQLVGMLRGISAGMKYLSDMG 144
Query: 496 IVHRDIKPENLLVEMSGCHVKVLKVGDFGLAQRVL----RPMFTVCGTPT---YVAPEIL 548
VHRD+ N+L+ + V KV DFGL+ RVL +T G + APE +
Sbjct: 145 YVHRDLAARNILINSN----LVCKVSDFGLS-RVLEDDPEAAYTTRGGKIPIRWTAPEAI 199
Query: 549 NESGYGVKIDVWAAGVILY-ILLCGFPPFVSDTNDQDELFDDILSGQYGFPSP 600
+ DVW+ G++++ ++ G P+ TN QD + + Y PSP
Sbjct: 200 AFRKFTSASDVWSYGIVMWEVVSYGERPYWEMTN-QDVI--KAVEEGYRLPSP 249
>pdb|1K9A|A Chain A, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|B Chain B, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|C Chain C, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|D Chain D, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|E Chain E, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|F Chain F, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
Length = 450
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 54/188 (28%), Positives = 81/188 (43%), Gaps = 12/188 (6%)
Query: 383 QIIGDGNFAVVRQVYDKHKDMDCALKIIDKSKLLGKKQMIENEVNILRSVNHPNIIKLLD 442
Q IG G F V + ++ A+K I Q E +++ + H N+++LL
Sbjct: 199 QTIGKGEFGDV--MLGDYRGNKVAVKCIKND---ATAQAFLAEASVMTQLRHSNLVQLLG 253
Query: 443 E-YDTNNELYLVIELIKGGDLFDAISKNVKFSEEDSKFMTQSL--ASALSYLHDNYIVHR 499
+ LY+V E + G L D + + + SL A+ YL N VHR
Sbjct: 254 VIVEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEGNNFVHR 313
Query: 500 DIKPENLLVEMSGCHVKVLKVGDFGLAQRVLRPMFTVCGTPTYVAPEILNESGYGVKIDV 559
D+ N+LV V KV DFGL + T + APE L E + K DV
Sbjct: 314 DLAARNVLVSED----NVAKVSDFGLTKEASSTQDTGKLPVKWTAPEALREKKFSTKSDV 369
Query: 560 WAAGVILY 567
W+ G++L+
Sbjct: 370 WSFGILLW 377
>pdb|2A19|B Chain B, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A19|C Chain C, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A1A|B Chain B, Pkr Kinase Domain-Eif2alpha Complex
Length = 284
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 69/272 (25%), Positives = 120/272 (44%), Gaps = 45/272 (16%)
Query: 383 QIIGDGNFAVVRQVYDKHKDMDCALKIIDKSKLLGKKQMIENEVNILRSVNHPNIIKL-- 440
++IG G F QV+ +D +I + K +K E EV L ++H NI+
Sbjct: 17 ELIGSGGFG---QVFKAKHRIDGKTYVIKRVKYNNEKA--EREVKALAKLDHVNIVHYNG 71
Query: 441 -LDEYDTNNE-------------LYLVIELIKGGDLFDAISKNVKFSEEDSKFMT----Q 482
D +D + E L++ +E G L I K + E+ K + +
Sbjct: 72 CWDGFDYDPETSSKNSSRSKTKCLFIQMEFCDKGTLEQWIEK--RRGEKLDKVLALELFE 129
Query: 483 SLASALSYLHDNYIVHRDIKPENLLVEMSGCHVKVLKVGDFGLAQRVLR--PMFTVCGTP 540
+ + Y+H +++RD+KP N+ + K +K+GDFGL + GT
Sbjct: 130 QITKGVDYIHSKKLINRDLKPSNIFL----VDTKQVKIGDFGLVTSLKNDGKRXRSKGTL 185
Query: 541 TYVAPEILNESGYGVKIDVWAAGVILYILLCGFPPFVSDTN-DQDELFDDILSGQYGFPS 599
Y++PE ++ YG ++D++A G+IL LL V DT + + F D+ G
Sbjct: 186 RYMSPEQISSQDYGKEVDLYALGLILAELL-----HVCDTAFETSKFFTDLRDGIIS--- 237
Query: 600 PYWDDISEEAKELISHMLESNPDLRFSAEDVL 631
D ++ K L+ +L P+ R + ++L
Sbjct: 238 ---DIFDKKEKTLLQKLLSKKPEDRPNTSEIL 266
>pdb|3PJC|A Chain A, Crystal Structure Of Jak3 Complexed With A Potent Atp Site
Inhibitor Showing High Selectivity Within The Janus
Kinase Family
Length = 315
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 60/200 (30%), Positives = 95/200 (47%), Gaps = 20/200 (10%)
Query: 385 IGDGNFAVVRQV-YDKHKDMDCALKIIDKSKLLGKKQM--IENEVNILRSVNHPNIIKLL 441
+G GNF V YD D AL + + + G Q + E+ IL++++ I+K
Sbjct: 19 LGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQILKALHSDFIVKYR 78
Query: 442 D-EYDTNNE-LYLVIELIKGGDLFDAISKN-VKFSEEDSKFMTQSLASALSYLHDNYIVH 498
Y + L LV+E + G L D + ++ + + + + YL VH
Sbjct: 79 GVSYGPGRQSLRLVMEYLPSGCLRDFLQRHRARLDASRLLLYSSQICKGMEYLGSRRCVH 138
Query: 499 RDIKPENLLVEMSGCHVKVLKVGDFGLAQRVLRPM---FTVCGTPT-----YVAPEILNE 550
RD+ N+LVE S HVK+ DFGLA+ L P+ + V P + APE L++
Sbjct: 139 RDLAARNILVE-SEAHVKI---ADFGLAK--LLPLDKDYYVVREPGQSPIFWYAPESLSD 192
Query: 551 SGYGVKIDVWAAGVILYILL 570
+ + + DVW+ GV+LY L
Sbjct: 193 NIFSRQSDVWSFGVVLYELF 212
>pdb|2IVS|A Chain A, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
pdb|2IVS|B Chain B, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
Length = 314
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 69/285 (24%), Positives = 127/285 (44%), Gaps = 44/285 (15%)
Query: 381 VGQIIGDGNFAVVRQVYDKHKD-----MDCALKIIDKSKLLGKKQMIENEVNILRSVNHP 435
+G+ +G+G F V + H A+K++ ++ + + + +E N+L+ VNHP
Sbjct: 27 LGKTLGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENASPSELRDLLSEFNVLKQVNHP 86
Query: 436 NIIKLLDEYDTNNELYLVIELIKGGDLFDAISKNVK----------------FSEEDSKF 479
++IKL + L L++E K G L + ++ K D +
Sbjct: 87 HVIKLYGACSQDGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHPDERA 146
Query: 480 MTQS--------LASALSYLHDNYIVHRDIKPENLLVEMSGCHVKVLKVGDFGLAQRVLR 531
+T ++ + YL + +VHRD+ N+LV + +K+ DFGL++ V
Sbjct: 147 LTMGDLISFAWQISQGMQYLAEMKLVHRDLAARNILV----AEGRKMKISDFGLSRDVYE 202
Query: 532 PMFTVCGTP-----TYVAPEILNESGYGVKIDVWAAGVILY-ILLCGFPPFVSDTNDQDE 585
V + ++A E L + Y + DVW+ GV+L+ I+ G P+ ++
Sbjct: 203 EDSYVKRSQGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVTLGGNPYPGIPPER-- 260
Query: 586 LFDDILSGQYGFPSPYWDDISEEAKELISHMLESNPDLRFSAEDV 630
LF+ + +G + P D+ SEE L+ + PD R D+
Sbjct: 261 LFNLLKTG-HRMERP--DNCSEEMYRLMLQCWKQEPDKRPVFADI 302
>pdb|2ZV7|A Chain A, Lyn Tyrosine Kinase Domain, Apo Form
pdb|2ZV8|A Chain A, Lyn Tyrosine Kinase Domain-Amp-Pnp Complex
pdb|2ZV9|A Chain A, Lyn Tyrosine Kinase Domain-Pp2 Complex
pdb|2ZVA|A Chain A, Lyn Tyrosine Kinase Domain-dasatinib Complex
Length = 279
Score = 68.2 bits (165), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 52/209 (24%), Positives = 96/209 (45%), Gaps = 24/209 (11%)
Query: 385 IGDGNFAVVRQVYDKHKDMDCALKIIDKSKLLGKKQMIENEVNILRSVNHPNIIKLLDEY 444
+G G F V Y + A+K + + Q E N+++++ H +++L
Sbjct: 20 LGAGQFGEVWMGY-YNNSTKVAVKTLKPGTM--SVQAFLEEANLMKTLQHDKLVRLYAVV 76
Query: 445 DTNNELYLVIELIKGGDLFDAISKNVKFSEEDSKFM-------TQSLASALSYLHDNYIV 497
+Y++ E + G L D + S+E K + + +A ++Y+ +
Sbjct: 77 TKEEPIYIITEFMAKGSLLDFLK-----SDEGGKVLLPKLIDFSAQIAEGMAYIERKNYI 131
Query: 498 HRDIKPENLLVEMSGCHVKVLKVGDFGLAQRVLRPMFTV---CGTPT-YVAPEILNESGY 553
HRD++ N+LV S + K+ DFGLA+ + +T P + APE +N +
Sbjct: 132 HRDLRAANVLVSES----LMCKIADFGLARVIEDNEYTAREGAKFPIKWTAPEAINFGCF 187
Query: 554 GVKIDVWAAGVILY-ILLCGFPPFVSDTN 581
+K +VW+ G++LY I+ G P+ TN
Sbjct: 188 TIKSNVWSFGILLYEIVTYGKIPYPGRTN 216
>pdb|3LXK|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXL|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 327
Score = 68.2 bits (165), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 60/200 (30%), Positives = 95/200 (47%), Gaps = 20/200 (10%)
Query: 385 IGDGNFAVVRQV-YDKHKDMDCALKIIDKSKLLGKKQM--IENEVNILRSVNHPNIIKLL 441
+G GNF V YD D AL + + + G Q + E+ IL++++ I+K
Sbjct: 31 LGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQILKALHSDFIVKYR 90
Query: 442 D-EYDTNNE-LYLVIELIKGGDLFDAISKN-VKFSEEDSKFMTQSLASALSYLHDNYIVH 498
Y + L LV+E + G L D + ++ + + + + YL VH
Sbjct: 91 GVSYGPGRQSLRLVMEYLPSGCLRDFLQRHRARLDASRLLLYSSQICKGMEYLGSRRCVH 150
Query: 499 RDIKPENLLVEMSGCHVKVLKVGDFGLAQRVLRPM---FTVCGTPT-----YVAPEILNE 550
RD+ N+LVE S HVK+ DFGLA+ L P+ + V P + APE L++
Sbjct: 151 RDLAARNILVE-SEAHVKI---ADFGLAK--LLPLDKDYYVVREPGQSPIFWYAPESLSD 204
Query: 551 SGYGVKIDVWAAGVILYILL 570
+ + + DVW+ GV+LY L
Sbjct: 205 NIFSRQSDVWSFGVVLYELF 224
>pdb|1BYG|A Chain A, Kinase Domain Of Human C-Terminal Src Kinase (Csk) In
Complex With Inhibitor Staurosporine
Length = 278
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 55/189 (29%), Positives = 85/189 (44%), Gaps = 14/189 (7%)
Query: 383 QIIGDGNFAVVRQVYDKHKDMDCALKIIDKSKLLGKKQMIENEVNILRSVNHPNIIKLLD 442
Q IG G F V + ++ A+K I Q E +++ + H N+++LL
Sbjct: 27 QTIGKGEFGDV--MLGDYRGNKVAVKCIKND---ATAQAFLAEASVMTQLRHSNLVQLLG 81
Query: 443 E-YDTNNELYLVIELIKGGDLFDAI---SKNVKFSEEDSKFMTQSLASALSYLHDNYIVH 498
+ LY+V E + G L D + ++V + KF + + A+ YL N VH
Sbjct: 82 VIVEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKF-SLDVCEAMEYLEGNNFVH 140
Query: 499 RDIKPENLLVEMSGCHVKVLKVGDFGLAQRVLRPMFTVCGTPTYVAPEILNESGYGVKID 558
RD+ N+LV V KV DFGL + T + APE L E + K D
Sbjct: 141 RDLAARNVLVSED----NVAKVSDFGLTKEASSTQDTGKLPVKWTAPEALREKKFSTKSD 196
Query: 559 VWAAGVILY 567
VW+ G++L+
Sbjct: 197 VWSFGILLW 205
>pdb|3D7U|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|C Chain C, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 263
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 55/189 (29%), Positives = 85/189 (44%), Gaps = 14/189 (7%)
Query: 383 QIIGDGNFAVVRQVYDKHKDMDCALKIIDKSKLLGKKQMIENEVNILRSVNHPNIIKLLD 442
Q IG G F V + ++ A+K I Q E +++ + H N+++LL
Sbjct: 12 QTIGKGEFGDV--MLGDYRGNKVAVKCIKND---ATAQAFLAEASVMTQLRHSNLVQLLG 66
Query: 443 E-YDTNNELYLVIELIKGGDLFDAI---SKNVKFSEEDSKFMTQSLASALSYLHDNYIVH 498
+ LY+V E + G L D + ++V + KF + + A+ YL N VH
Sbjct: 67 VIVEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKF-SLDVCEAMEYLEGNNFVH 125
Query: 499 RDIKPENLLVEMSGCHVKVLKVGDFGLAQRVLRPMFTVCGTPTYVAPEILNESGYGVKID 558
RD+ N+LV V KV DFGL + T + APE L E + K D
Sbjct: 126 RDLAARNVLVSED----NVAKVSDFGLTKEASSTQDTGKLPVKWTAPEALREKKFSTKSD 181
Query: 559 VWAAGVILY 567
VW+ G++L+
Sbjct: 182 VWSFGILLW 190
>pdb|1YVJ|A Chain A, Crystal Structure Of The Jak3 Kinase Domain In Complex
With A Staurosporine Analogue
Length = 290
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 60/200 (30%), Positives = 94/200 (47%), Gaps = 20/200 (10%)
Query: 385 IGDGNFAVVRQV-YDKHKDMDCALKIIDKSKLLGKKQM--IENEVNILRSVNHPNIIKL- 440
+G GNF V YD D AL + + + G Q + E+ IL++++ I+K
Sbjct: 15 LGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQILKALHSDFIVKYR 74
Query: 441 -LDEYDTNNELYLVIELIKGGDLFDAISKN-VKFSEEDSKFMTQSLASALSYLHDNYIVH 498
+ EL LV+E + G L D + ++ + + + + YL VH
Sbjct: 75 GVSYGPGRPELRLVMEYLPSGCLRDFLQRHRARLDASRLLLYSSQICKGMEYLGSRRCVH 134
Query: 499 RDIKPENLLVEMSGCHVKVLKVGDFGLAQRVLRPM---FTVCGTPT-----YVAPEILNE 550
RD+ N+LVE S HVK+ DFGLA+ L P+ V P + APE L++
Sbjct: 135 RDLAARNILVE-SEAHVKI---ADFGLAK--LLPLDKDXXVVREPGQSPIFWYAPESLSD 188
Query: 551 SGYGVKIDVWAAGVILYILL 570
+ + + DVW+ GV+LY L
Sbjct: 189 NIFSRQSDVWSFGVVLYELF 208
>pdb|1JPA|A Chain A, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
pdb|1JPA|B Chain B, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
Length = 312
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 61/234 (26%), Positives = 110/234 (47%), Gaps = 22/234 (9%)
Query: 381 VGQIIGDGNFAVVRQVYDK---HKDMDCALKIIDKSKLLGKKQMIENEVNILRSVNHPNI 437
+ Q+IG G F V + K +++ A+K + +++ +E +I+ +HPN+
Sbjct: 37 IEQVIGAGEFGEVCSGHLKLPGKREIFVAIKTLKSGYTEKQRRDFLSEASIMGQFDHPNV 96
Query: 438 IKLLDEYDTNNELYLVIELIKGGDLFDAISKN-VKFSEEDSKFMTQSLASALSYLHDNYI 496
I L + + ++ E ++ G L + +N +F+ M + +A+ + YL D
Sbjct: 97 IHLEGVVTKSTPVMIITEFMENGSLDSFLRQNDGQFTVIQLVGMLRGIAAGMKYLADMNY 156
Query: 497 VHRDIKPENLLVEMSGCHVKVLKVGDFGLAQRVLR-----PMFTVC---GTPT-YVAPEI 547
VHRD+ N+LV + V KV DFGL+ R L P +T P + APE
Sbjct: 157 VHRDLAARNILVNSN----LVCKVSDFGLS-RFLEDDTSDPTYTSALGGKIPIRWTAPEA 211
Query: 548 LNESGYGVKIDVWAAGVILY-ILLCGFPPFVSDTNDQDELFDDILSGQYGFPSP 600
+ + DVW+ G++++ ++ G P+ TN QD + + + Y P P
Sbjct: 212 IQYRKFTSASDVWSYGIVMWEVMSYGERPYWDMTN-QDVI--NAIEQDYRLPPP 262
>pdb|3QUP|A Chain A, Inhibitor Bound Structure Of The Kinase Domain Of The
Murine Receptor Tyrosine Kinase Tyro3 (Sky)
Length = 323
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 72/303 (23%), Positives = 138/303 (45%), Gaps = 49/303 (16%)
Query: 364 KRRENLNIPSKLLQRYSVGQIIGDGNFAVVRQVYDKHKD---MDCALKIIDKSKLLGKKQ 420
++ E++ IP Q++++G+++G G F VR+ K +D + A+K++ K+ ++
Sbjct: 13 EKLEDVLIPE---QQFTLGRMLGKGEFGSVREAQLKQEDGSFVKVAVKML-KADIIASSD 68
Query: 421 MIE--NEVNILRSVNHPNIIKLLD---EYDTNNEL---YLVIELIKGGDLFDAISKNVKF 472
+ E E ++ +HP++ KL+ L +++ +K GDL A +
Sbjct: 69 IEEFLREAACMKEFDHPHVAKLVGVSLRSRAKGRLPIPMVILPFMKHGDL-HAFLLASRI 127
Query: 473 SEEDSKFMTQSL-------ASALSYLHDNYIVHRDIKPENLLV--EMSGCHVKVLKVGDF 523
E Q+L A + YL +HRD+ N ++ +M+ C V DF
Sbjct: 128 GENPFNLPLQTLVRFMVDIACGMEYLSSRNFIHRDLAARNCMLAEDMTVC------VADF 181
Query: 524 GLAQRVLRPMFTVCGTPT-----YVAPEILNESGYGVKIDVWAAGVILY-ILLCGFPPFV 577
GL++++ + G + ++A E L ++ Y V DVWA GV ++ I+ G P+
Sbjct: 182 GLSRKIYSGDYYRQGCASKLPVKWLALESLADNLYTVHSDVWAFGVTMWEIMTRGQTPYA 241
Query: 578 SDTNDQDELFDDILSGQYGFPSPYWDDISEEAKELISHMLESNPD-------LRFSAEDV 630
N E+++ ++ G P + EE +L+ ++P LR E++
Sbjct: 242 GIEN--AEIYNYLIGGNRLKQPP---ECMEEVYDLMYQCWSADPKQRPSFTCLRMELENI 296
Query: 631 LDH 633
L H
Sbjct: 297 LGH 299
>pdb|4E6D|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6D|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6Q|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
pdb|4E6Q|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
Length = 298
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 59/206 (28%), Positives = 96/206 (46%), Gaps = 32/206 (15%)
Query: 385 IGDGNFAVVRQV-YDKHKDMDCALKIIDKSKLLGKKQM--IENEVNILRSVNHPNIIKL- 440
+G GNF V YD +D + + K + ++ + E E+ IL+S+ H NI+K
Sbjct: 21 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 80
Query: 441 -LDEYDTNNELYLVIELIKGGDLFDAISKNVKFSEEDSKFM--TQSLASALSYLHDNYIV 497
+ L L++E + G L + + K+ K + K + T + + YL +
Sbjct: 81 GVCYSAGRRNLKLIMEFLPYGSLREYLQKH-KERIDHIKLLQYTSQICKGMEYLGTKRYI 139
Query: 498 HRDIKPENLLVEMSGCHVKVLKVGDFGLAQRVLR-------------PMFTVCGTPTYVA 544
HRD+ N+LVE + +K+GDFGL + + + P+F + A
Sbjct: 140 HRDLATRNILVE----NENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIF-------WYA 188
Query: 545 PEILNESGYGVKIDVWAAGVILYILL 570
PE L ES + V DVW+ GV+LY L
Sbjct: 189 PESLTESKFSVASDVWSFGVVLYELF 214
>pdb|2ZMD|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain T686a
Mutant In Complex With Sp600125 Inhibitor
Length = 390
Score = 67.4 bits (163), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 77/282 (27%), Positives = 134/282 (47%), Gaps = 37/282 (13%)
Query: 379 YSVGQIIGDGNFAVVRQVYDKHKDMDCALKIIDKSKLLGKKQMIE---NEVNILRSVNHP 435
YS+ + IG G + V QV ++ K + A+K ++ + Q ++ NE+ L +
Sbjct: 58 YSILKQIGSGGSSKVFQVLNEKKQI-YAIKYVNLEE--ADNQTLDSYRNEIAYLNKLQQH 114
Query: 436 N--IIKLLDEYDTNNELYLVIELIKGGDLFDAISKNVKFSEEDSKFMTQSLASALSYLHD 493
+ II+L D T+ +Y+V+E DL + K + K +++ A+ +H
Sbjct: 115 SDKIIRLYDYEITDQYIYMVMEC-GNIDLNSWLKKKKSIDPWERKSYWKNMLEAVHTIHQ 173
Query: 494 NYIVHRDIKPENLLVEMSGCHVKVLKVGDFGLAQRVLRPMFTV-----CGTPTYVAPEIL 548
+ IVH D+KP N L+ + G +LK+ DFG+A ++ +V G Y+ PE +
Sbjct: 174 HGIVHSDLKPANFLI-VDG----MLKLIDFGIANQMQPDTTSVVKDSQVGAVNYMPPEAI 228
Query: 549 N------ESG-----YGVKIDVWAAGVILYILLCGFPPFVSDTNDQDELFDDI-LSGQYG 596
E+G K DVW+ G ILY + G PF N +L I + +
Sbjct: 229 KDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQISKLHAIIDPNHEIE 288
Query: 597 FPSPYWDDISE-EAKELISHMLESNPDLRFSAEDVLDHPWLE 637
FP DI E + ++++ L+ +P R S ++L HP+++
Sbjct: 289 FP-----DIPEKDLQDVLKCCLKRDPKQRISIPELLAHPYVQ 325
>pdb|2H34|A Chain A, Apoenzyme Crystal Structure Of The Tuberculosis
SerineTHREONINE Kinase, Pkne
pdb|2H34|B Chain B, Apoenzyme Crystal Structure Of The Tuberculosis
SerineTHREONINE Kinase, Pkne
Length = 309
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 46/161 (28%), Positives = 73/161 (45%), Gaps = 8/161 (4%)
Query: 423 ENEVNILRSVNHPNIIKLLDEYDTNNELYLVIELIKGGDLFDAISKNVKFSEEDSKFMTQ 482
+ E + P+++ + D + + +LY+ LI G DL + + + + + +
Sbjct: 82 QREARTAGRLQEPHVVPIHDFGEIDGQLYVDXRLINGVDLAAXLRRQGPLAPPRAVAIVR 141
Query: 483 SLASALSYLHDNYIVHRDIKPENLLVEMSGCHVKVLKVGDFGLAQRV----LRPMFTVCG 538
+ SAL H HRD+KPEN+LV V DFG+A L + G
Sbjct: 142 QIGSALDAAHAAGATHRDVKPENILVSADDFAYLV----DFGIASATTDEKLTQLGNTVG 197
Query: 539 TPTYVAPEILNESGYGVKIDVWAAGVILYILLCGFPPFVSD 579
T Y APE +ES + D++A +LY L G PP+ D
Sbjct: 198 TLYYXAPERFSESHATYRADIYALTCVLYECLTGSPPYQGD 238
>pdb|3LQ8|A Chain A, Structure Of The Kinase Domain Of C-Met Bound To Xl880
(Gsk1
Length = 302
Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 60/226 (26%), Positives = 105/226 (46%), Gaps = 20/226 (8%)
Query: 372 PSKLLQRYSVGQIIGDGNFAVVRQ---VYDKHKDMDCALKIIDKSKLLGKKQMIENEVNI 428
PS L+ ++ ++IG G+F V + + K + CA+K +++ +G+ E I
Sbjct: 25 PSSLIVHFN--EVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGII 82
Query: 429 LRSVNHPNIIKLLDE-YDTNNELYLVIELIKGGDLFDAISKNVKF-SEEDSKFMTQSLAS 486
++ +HPN++ LL + +V+ +K GDL + I + +D +A
Sbjct: 83 MKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAK 142
Query: 487 ALSYLHDNYIVHRDIKPENLLVEMSGCHVKVLKVGDFGLAQRVLRPMFTVCGTPT----- 541
+ YL VHRD+ N +++ +KV DFGLA+ + + T
Sbjct: 143 GMKYLASKKFVHRDLAARNCMLDEK----FTVKVADFGLARDMYDKEYYSVHNKTGAKLP 198
Query: 542 --YVAPEILNESGYGVKIDVWAAGVILYILLC-GFPPFVSDTNDQD 584
++A E L + K DVW+ GV+L+ L+ G PP+ D N D
Sbjct: 199 VKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPY-PDVNTFD 243
>pdb|3F66|A Chain A, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
pdb|3F66|B Chain B, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
Length = 298
Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 60/226 (26%), Positives = 105/226 (46%), Gaps = 20/226 (8%)
Query: 372 PSKLLQRYSVGQIIGDGNFAVVRQ---VYDKHKDMDCALKIIDKSKLLGKKQMIENEVNI 428
PS L+ ++ ++IG G+F V + + K + CA+K +++ +G+ E I
Sbjct: 22 PSSLIVHFN--EVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGII 79
Query: 429 LRSVNHPNIIKLLDE-YDTNNELYLVIELIKGGDLFDAISKNVKF-SEEDSKFMTQSLAS 486
++ +HPN++ LL + +V+ +K GDL + I + +D +A
Sbjct: 80 MKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAK 139
Query: 487 ALSYLHDNYIVHRDIKPENLLVEMSGCHVKVLKVGDFGLAQRVLRPMFTVCGTPT----- 541
+ YL VHRD+ N +++ +KV DFGLA+ + + T
Sbjct: 140 GMKYLASKKFVHRDLAARNCMLDEK----FTVKVADFGLARDMYDKEYYSVHNKTGAKLP 195
Query: 542 --YVAPEILNESGYGVKIDVWAAGVILYILLC-GFPPFVSDTNDQD 584
++A E L + K DVW+ GV+L+ L+ G PP+ D N D
Sbjct: 196 VKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPY-PDVNTFD 240
>pdb|4GG5|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
pdb|4GG7|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
Length = 319
Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 60/226 (26%), Positives = 105/226 (46%), Gaps = 20/226 (8%)
Query: 372 PSKLLQRYSVGQIIGDGNFAVVRQ---VYDKHKDMDCALKIIDKSKLLGKKQMIENEVNI 428
PS L+ ++ ++IG G+F V + + K + CA+K +++ +G+ E I
Sbjct: 46 PSSLIVHFN--EVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGII 103
Query: 429 LRSVNHPNIIKLLDE-YDTNNELYLVIELIKGGDLFDAISKNVKF-SEEDSKFMTQSLAS 486
++ +HPN++ LL + +V+ +K GDL + I + +D +A
Sbjct: 104 MKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAK 163
Query: 487 ALSYLHDNYIVHRDIKPENLLVEMSGCHVKVLKVGDFGLAQRVLRPMFTVCGTPT----- 541
+ YL VHRD+ N +++ +KV DFGLA+ + + T
Sbjct: 164 GMKYLASKKFVHRDLAARNCMLDEK----FTVKVADFGLARDMYDKEYYSVHNKTGAKLP 219
Query: 542 --YVAPEILNESGYGVKIDVWAAGVILYILLC-GFPPFVSDTNDQD 584
++A E L + K DVW+ GV+L+ L+ G PP+ D N D
Sbjct: 220 VKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPY-PDVNTFD 264
>pdb|3Q6U|A Chain A, Structure Of The Apo Met Receptor Kinase In The
Dually-Phosphorylated, Activated State
Length = 308
Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 60/226 (26%), Positives = 105/226 (46%), Gaps = 20/226 (8%)
Query: 372 PSKLLQRYSVGQIIGDGNFAVVRQ---VYDKHKDMDCALKIIDKSKLLGKKQMIENEVNI 428
PS L+ ++ ++IG G+F V + + K + CA+K +++ +G+ E I
Sbjct: 27 PSSLIVHFN--EVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGII 84
Query: 429 LRSVNHPNIIKLLDE-YDTNNELYLVIELIKGGDLFDAISKNVKF-SEEDSKFMTQSLAS 486
++ +HPN++ LL + +V+ +K GDL + I + +D +A
Sbjct: 85 MKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAK 144
Query: 487 ALSYLHDNYIVHRDIKPENLLVEMSGCHVKVLKVGDFGLAQRVLRPMFTVCGTPT----- 541
+ YL VHRD+ N +++ +KV DFGLA+ + + T
Sbjct: 145 GMKYLASKKFVHRDLAARNCMLDEK----FTVKVADFGLARDMYDKEYYSVHNKTGAKLP 200
Query: 542 --YVAPEILNESGYGVKIDVWAAGVILYILLC-GFPPFVSDTNDQD 584
++A E L + K DVW+ GV+L+ L+ G PP+ D N D
Sbjct: 201 VKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPY-PDVNTFD 245
>pdb|2WD1|A Chain A, Human C-Met Kinase In Complex With Azaindole Inhibitor
Length = 292
Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 60/226 (26%), Positives = 105/226 (46%), Gaps = 20/226 (8%)
Query: 372 PSKLLQRYSVGQIIGDGNFAVVRQ---VYDKHKDMDCALKIIDKSKLLGKKQMIENEVNI 428
PS L+ ++ ++IG G+F V + + K + CA+K +++ +G+ E I
Sbjct: 19 PSSLIVHFN--EVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGII 76
Query: 429 LRSVNHPNIIKLLDE-YDTNNELYLVIELIKGGDLFDAISKNVKF-SEEDSKFMTQSLAS 486
++ +HPN++ LL + +V+ +K GDL + I + +D +A
Sbjct: 77 MKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAK 136
Query: 487 ALSYLHDNYIVHRDIKPENLLVEMSGCHVKVLKVGDFGLAQRVLRPMFTVCGTPT----- 541
+ YL VHRD+ N +++ +KV DFGLA+ + + T
Sbjct: 137 GMKYLASKKFVHRDLAARNCMLDEK----FTVKVADFGLARDMYDKEYYSVHNKTGAKLP 192
Query: 542 --YVAPEILNESGYGVKIDVWAAGVILYILLC-GFPPFVSDTNDQD 584
++A E L + K DVW+ GV+L+ L+ G PP+ D N D
Sbjct: 193 VKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPY-PDVNTFD 237
>pdb|2WGJ|A Chain A, X-Ray Structure Of Pf-02341066 Bound To The Kinase Domain
Of C-Met
pdb|2WKM|A Chain A, X-Ray Structure Of Pha-00665752 Bound To The Kinase Domain
Of C-Met
pdb|3ZXZ|A Chain A, X-Ray Structure Of Pf-04217903 Bound To The Kinase Domain
Of C-Met
pdb|3ZZE|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
N'-
((3z)-4-Chloro-7-Methyl-2-Oxo-1,2-Dihydro-3h-Indol-3-
Ylidene)-2-(4-Hydroxyphenyl)propanohydrazide
pdb|4AOI|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( 3-((1h-
Pyrrolo(2,3-B)pyridin-3-Yl)methyl)-(1,2,4)triazolo(
4,3-B)(1,2,4) Triazin-6-Yl)benzonitrile
pdb|4AP7|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( (6-(4-
Fluorophenyl)-(1,2,4)triazolo(4,3-B)(1,2,
4)triazin-3-Yl)methyl) Phenol
Length = 306
Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 60/226 (26%), Positives = 105/226 (46%), Gaps = 20/226 (8%)
Query: 372 PSKLLQRYSVGQIIGDGNFAVVRQ---VYDKHKDMDCALKIIDKSKLLGKKQMIENEVNI 428
PS L+ ++ ++IG G+F V + + K + CA+K +++ +G+ E I
Sbjct: 24 PSSLIVHFN--EVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGII 81
Query: 429 LRSVNHPNIIKLLDE-YDTNNELYLVIELIKGGDLFDAISKNVKF-SEEDSKFMTQSLAS 486
++ +HPN++ LL + +V+ +K GDL + I + +D +A
Sbjct: 82 MKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAK 141
Query: 487 ALSYLHDNYIVHRDIKPENLLVEMSGCHVKVLKVGDFGLAQRVLRPMFTVCGTPT----- 541
+ YL VHRD+ N +++ +KV DFGLA+ + + T
Sbjct: 142 GMKYLASKKFVHRDLAARNCMLDEK----FTVKVADFGLARDMYDKEYYSVHNKTGAKLP 197
Query: 542 --YVAPEILNESGYGVKIDVWAAGVILYILLC-GFPPFVSDTNDQD 584
++A E L + K DVW+ GV+L+ L+ G PP+ D N D
Sbjct: 198 VKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPY-PDVNTFD 242
>pdb|3DKC|A Chain A, Sgx Clone 5698a65kfg1h1
pdb|3DKF|A Chain A, Sgx Clone 5698a65kfg1h1
Length = 317
Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 60/226 (26%), Positives = 105/226 (46%), Gaps = 20/226 (8%)
Query: 372 PSKLLQRYSVGQIIGDGNFAVVRQ---VYDKHKDMDCALKIIDKSKLLGKKQMIENEVNI 428
PS L+ ++ ++IG G+F V + + K + CA+K +++ +G+ E I
Sbjct: 28 PSSLIVHFN--EVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGII 85
Query: 429 LRSVNHPNIIKLLDE-YDTNNELYLVIELIKGGDLFDAISKNVKF-SEEDSKFMTQSLAS 486
++ +HPN++ LL + +V+ +K GDL + I + +D +A
Sbjct: 86 MKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAK 145
Query: 487 ALSYLHDNYIVHRDIKPENLLVEMSGCHVKVLKVGDFGLAQRVLRPMFTVCGTPT----- 541
+ +L VHRD+ N +++ +KV DFGLA+ + F T
Sbjct: 146 GMKFLASKKFVHRDLAARNCMLDEK----FTVKVADFGLARDMYDKEFDSVHNKTGAKLP 201
Query: 542 --YVAPEILNESGYGVKIDVWAAGVILYILLC-GFPPFVSDTNDQD 584
++A E L + K DVW+ GV+L+ L+ G PP+ D N D
Sbjct: 202 VKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPY-PDVNTFD 246
>pdb|1R0P|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
The Microbial Alkaloid K-252a
pdb|1R1W|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met
Length = 312
Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 60/226 (26%), Positives = 105/226 (46%), Gaps = 20/226 (8%)
Query: 372 PSKLLQRYSVGQIIGDGNFAVVRQ---VYDKHKDMDCALKIIDKSKLLGKKQMIENEVNI 428
PS L+ ++ ++IG G+F V + + K + CA+K +++ +G+ E I
Sbjct: 25 PSSLIVHFN--EVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGII 82
Query: 429 LRSVNHPNIIKLLDE-YDTNNELYLVIELIKGGDLFDAISKNVKF-SEEDSKFMTQSLAS 486
++ +HPN++ LL + +V+ +K GDL + I + +D +A
Sbjct: 83 MKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAK 142
Query: 487 ALSYLHDNYIVHRDIKPENLLVEMSGCHVKVLKVGDFGLAQRVLRPMFTVCGTPT----- 541
+ +L VHRD+ N +++ +KV DFGLA+ + F T
Sbjct: 143 GMKFLASKKFVHRDLAARNCMLDEK----FTVKVADFGLARDMYDKEFDSVHNKTGAKLP 198
Query: 542 --YVAPEILNESGYGVKIDVWAAGVILYILLC-GFPPFVSDTNDQD 584
++A E L + K DVW+ GV+L+ L+ G PP+ D N D
Sbjct: 199 VKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPY-PDVNTFD 243
>pdb|3CTH|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CTJ|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CE3|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolopyridinepyridone Based Inhibitor
pdb|3F82|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
N-
(4-(2-Amino-3-Chloropyridin-4-Yloxy)-3-Fluorophenyl)-4-
Ethoxy-1-(4-Fluorophenyl)-2-Oxo-1,2-Dihydropyridine-3-
Carboxamide
pdb|3L8V|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepat Growth Factor Receptor C-Met In Complex With A
Biarylamine Inhibitor
Length = 314
Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 60/226 (26%), Positives = 105/226 (46%), Gaps = 20/226 (8%)
Query: 372 PSKLLQRYSVGQIIGDGNFAVVRQ---VYDKHKDMDCALKIIDKSKLLGKKQMIENEVNI 428
PS L+ ++ ++IG G+F V + + K + CA+K +++ +G+ E I
Sbjct: 27 PSSLIVHFN--EVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGII 84
Query: 429 LRSVNHPNIIKLLDE-YDTNNELYLVIELIKGGDLFDAISKNVKF-SEEDSKFMTQSLAS 486
++ +HPN++ LL + +V+ +K GDL + I + +D +A
Sbjct: 85 MKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAK 144
Query: 487 ALSYLHDNYIVHRDIKPENLLVEMSGCHVKVLKVGDFGLAQRVLRPMFTVCGTPT----- 541
+ +L VHRD+ N +++ +KV DFGLA+ + F T
Sbjct: 145 GMKFLASKKFVHRDLAARNCMLDEK----FTVKVADFGLARDMYDKEFDSVHNKTGAKLP 200
Query: 542 --YVAPEILNESGYGVKIDVWAAGVILYILLC-GFPPFVSDTNDQD 584
++A E L + K DVW+ GV+L+ L+ G PP+ D N D
Sbjct: 201 VKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPY-PDVNTFD 245
>pdb|2RFN|A Chain A, X-ray Structure Of C-met With Inhibitor.
pdb|2RFN|B Chain B, X-ray Structure Of C-met With Inhibitor.
pdb|2RFS|A Chain A, X-Ray Structure Of Su11274 Bound To C-Met
pdb|3CCN|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3CD8|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3EFJ|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFJ|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFK|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 50
pdb|3EFK|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 50
Length = 310
Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 60/226 (26%), Positives = 105/226 (46%), Gaps = 20/226 (8%)
Query: 372 PSKLLQRYSVGQIIGDGNFAVVRQ---VYDKHKDMDCALKIIDKSKLLGKKQMIENEVNI 428
PS L+ ++ ++IG G+F V + + K + CA+K +++ +G+ E I
Sbjct: 27 PSSLIVHFN--EVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGII 84
Query: 429 LRSVNHPNIIKLLDE-YDTNNELYLVIELIKGGDLFDAISKNVKF-SEEDSKFMTQSLAS 486
++ +HPN++ LL + +V+ +K GDL + I + +D +A
Sbjct: 85 MKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAK 144
Query: 487 ALSYLHDNYIVHRDIKPENLLVEMSGCHVKVLKVGDFGLAQRVLRPMFTVCGTPT----- 541
+ YL VHRD+ N +++ +KV DFGLA+ + + T
Sbjct: 145 GMKYLASKKFVHRDLAARNCMLDEK----FTVKVADFGLARDMYDKEYYSVHNKTGAKLP 200
Query: 542 --YVAPEILNESGYGVKIDVWAAGVILYILLC-GFPPFVSDTNDQD 584
++A E L + K DVW+ GV+L+ L+ G PP+ D N D
Sbjct: 201 VKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPY-PDVNTFD 245
>pdb|2G15|A Chain A, Structural Characterization Of Autoinhibited C-Met Kinase
pdb|3RHK|A Chain A, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
pdb|3RHK|B Chain B, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
Length = 318
Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 60/226 (26%), Positives = 105/226 (46%), Gaps = 20/226 (8%)
Query: 372 PSKLLQRYSVGQIIGDGNFAVVRQ---VYDKHKDMDCALKIIDKSKLLGKKQMIENEVNI 428
PS L+ ++ ++IG G+F V + + K + CA+K +++ +G+ E I
Sbjct: 45 PSSLIVHFN--EVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGII 102
Query: 429 LRSVNHPNIIKLLDE-YDTNNELYLVIELIKGGDLFDAISKNVKF-SEEDSKFMTQSLAS 486
++ +HPN++ LL + +V+ +K GDL + I + +D +A
Sbjct: 103 MKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAK 162
Query: 487 ALSYLHDNYIVHRDIKPENLLVEMSGCHVKVLKVGDFGLAQRVLRPMFTVCGTPT----- 541
+ YL VHRD+ N +++ +KV DFGLA+ + + T
Sbjct: 163 GMKYLASKKFVHRDLAARNCMLDEK----FTVKVADFGLARDMYDKEYYSVHNKTGAKLP 218
Query: 542 --YVAPEILNESGYGVKIDVWAAGVILYILLC-GFPPFVSDTNDQD 584
++A E L + K DVW+ GV+L+ L+ G PP+ D N D
Sbjct: 219 VKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPY-PDVNTFD 263
>pdb|3I5N|A Chain A, Crystal Structure Of C-Met With Triazolopyridazine
Inhibitor 13
pdb|3U6H|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 26
pdb|3U6I|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 58a
pdb|4DEG|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridazine Inhibitor 2
pdb|4DEH|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 3
pdb|4DEI|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 24
Length = 309
Score = 66.6 bits (161), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 60/226 (26%), Positives = 105/226 (46%), Gaps = 20/226 (8%)
Query: 372 PSKLLQRYSVGQIIGDGNFAVVRQ---VYDKHKDMDCALKIIDKSKLLGKKQMIENEVNI 428
PS L+ ++ ++IG G+F V + + K + CA+K +++ +G+ E I
Sbjct: 26 PSSLIVHFN--EVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGII 83
Query: 429 LRSVNHPNIIKLLDE-YDTNNELYLVIELIKGGDLFDAISKNVKF-SEEDSKFMTQSLAS 486
++ +HPN++ LL + +V+ +K GDL + I + +D +A
Sbjct: 84 MKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAK 143
Query: 487 ALSYLHDNYIVHRDIKPENLLVEMSGCHVKVLKVGDFGLAQRVLRPMFTVCGTPT----- 541
+ YL VHRD+ N +++ +KV DFGLA+ + + T
Sbjct: 144 GMKYLASKKFVHRDLAARNCMLDEK----FTVKVADFGLARDMYDKEYYSVHNKTGAKLP 199
Query: 542 --YVAPEILNESGYGVKIDVWAAGVILYILLC-GFPPFVSDTNDQD 584
++A E L + K DVW+ GV+L+ L+ G PP+ D N D
Sbjct: 200 VKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPY-PDVNTFD 244
>pdb|3A4P|A Chain A, Human C-Met Kinase Domain Complexed With
6-Benzyloxyquinoline Inhibitor
Length = 319
Score = 66.2 bits (160), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 60/226 (26%), Positives = 105/226 (46%), Gaps = 20/226 (8%)
Query: 372 PSKLLQRYSVGQIIGDGNFAVVRQ---VYDKHKDMDCALKIIDKSKLLGKKQMIENEVNI 428
PS L+ ++ ++IG G+F V + + K + CA+K +++ +G+ E I
Sbjct: 32 PSSLIVHFN--EVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGII 89
Query: 429 LRSVNHPNIIKLLDE-YDTNNELYLVIELIKGGDLFDAISKNVKF-SEEDSKFMTQSLAS 486
++ +HPN++ LL + +V+ +K GDL + I + +D +A
Sbjct: 90 MKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAK 149
Query: 487 ALSYLHDNYIVHRDIKPENLLVEMSGCHVKVLKVGDFGLAQRVLRPMFTVCGTPT----- 541
+ +L VHRD+ N +++ +KV DFGLA+ + F T
Sbjct: 150 GMKFLASKKFVHRDLAARNCMLDEK----FTVKVADFGLARDMYDKEFDSVHNKTGAKLP 205
Query: 542 --YVAPEILNESGYGVKIDVWAAGVILYILLC-GFPPFVSDTNDQD 584
++A E L + K DVW+ GV+L+ L+ G PP+ D N D
Sbjct: 206 VKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPY-PDVNTFD 250
>pdb|3QTI|A Chain A, C-Met Kinase In Complex With Nvp-Bvu972
pdb|3QTI|B Chain B, C-Met Kinase In Complex With Nvp-Bvu972
Length = 314
Score = 66.2 bits (160), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 60/226 (26%), Positives = 105/226 (46%), Gaps = 20/226 (8%)
Query: 372 PSKLLQRYSVGQIIGDGNFAVVRQ---VYDKHKDMDCALKIIDKSKLLGKKQMIENEVNI 428
PS L+ ++ ++IG G+F V + + K + CA+K +++ +G+ E I
Sbjct: 27 PSSLIVHFN--EVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGII 84
Query: 429 LRSVNHPNIIKLLDE-YDTNNELYLVIELIKGGDLFDAISKNVKF-SEEDSKFMTQSLAS 486
++ +HPN++ LL + +V+ +K GDL + I + +D +A
Sbjct: 85 MKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAK 144
Query: 487 ALSYLHDNYIVHRDIKPENLLVEMSGCHVKVLKVGDFGLAQRVLRPMFTVCGTPT----- 541
+ +L VHRD+ N +++ +KV DFGLA+ + F T
Sbjct: 145 GMKFLASKKFVHRDLAARNCMLDEK----FTVKVADFGLARDMYDKEFDSVHNKTGAKLP 200
Query: 542 --YVAPEILNESGYGVKIDVWAAGVILYILLC-GFPPFVSDTNDQD 584
++A E L + K DVW+ GV+L+ L+ G PP+ D N D
Sbjct: 201 VKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPY-PDVNTFD 245
>pdb|2IN6|A Chain A, Wee1 Kinase Complex With Inhibitor Pd311839
pdb|2IO6|A Chain A, Wee1 Kinase Complexed With Inhibitor Pd330961
Length = 287
Score = 66.2 bits (160), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 70/281 (24%), Positives = 119/281 (42%), Gaps = 45/281 (16%)
Query: 385 IGDGNFAVVRQVYDKHKDMDCALKIIDKSK--LLGKKQMIENEVNILRSV-------NHP 435
IG G F V+ K +D + I +SK L G +E N LR V H
Sbjct: 17 IGSGEFG---SVFKCVKRLDGCIYAIKRSKKPLAGSV----DEQNALREVYAHAVLGQHS 69
Query: 436 NIIKLLDEYDTNNELYLVIELIKGGDLFDAISKNVK----FSEEDSKFMTQSLASALSYL 491
++++ + ++ + + E GG L DAIS+N + F E + K + + L Y+
Sbjct: 70 HVVRYFSAWAEDDHMLIQNEYCNGGSLADAISENYRIMSYFKEAELKDLLLQVGRGLRYI 129
Query: 492 HDNYIVHRDIKPENLLVEMS---------------GCHVKVLKVGDFGLAQRVLRPMFTV 536
H +VH DIKP N+ + + + + K+GD G R+ P
Sbjct: 130 HSMSLVHMDIKPSNIFISRTSIPNAASEEGDEDDWASNKVMFKIGDLGHVTRISSPQVEE 189
Query: 537 CGTPTYVAPEILNESGYGV-KIDVWAAGVILYILLCGFPPFVSDTNDQDELFDDILSGQY 595
G ++A E+L E+ + K D++A + + + G P + + E+ L
Sbjct: 190 -GDSRFLANEVLQENYTHLPKADIFALALTV-VCAAGAEPLPRNGDQWHEIRQGRLP--- 244
Query: 596 GFPSPYWDDISEEAKELISHMLESNPDLRFSAEDVLDHPWL 636
P +S+E EL+ M+ +P+ R SA ++ H L
Sbjct: 245 RIPQV----LSQEFTELLKVMIHPDPERRPSAMALVKHSVL 281
>pdb|3BI6|A Chain A, Wee1 Kinase Complex With Inhibitor Pd352396
pdb|3BIZ|A Chain A, Wee1 Kinase Complex With Inhibitor Pd331618
pdb|3CQE|A Chain A, Wee1 Kinase Complex With Inhibitor Pd074291
pdb|3CR0|A Chain A, Wee1 Kinase Complex With Inhibitor Pd259_809
Length = 287
Score = 66.2 bits (160), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 70/281 (24%), Positives = 119/281 (42%), Gaps = 45/281 (16%)
Query: 385 IGDGNFAVVRQVYDKHKDMDCALKIIDKSK--LLGKKQMIENEVNILRSV-------NHP 435
IG G F V+ K +D + I +SK L G +E N LR V H
Sbjct: 17 IGSGEFG---SVFKCVKRLDGCIYAIKRSKKPLAGSV----DEQNALREVYAHAVLGQHS 69
Query: 436 NIIKLLDEYDTNNELYLVIELIKGGDLFDAISKNVK----FSEEDSKFMTQSLASALSYL 491
++++ + ++ + + E GG L DAIS+N + F E + K + + L Y+
Sbjct: 70 HVVRYFSAWAEDDHMLIQNEYCNGGSLADAISENYRIMSYFKEAELKDLLLQVGRGLRYI 129
Query: 492 HDNYIVHRDIKPENLLVEMS---------------GCHVKVLKVGDFGLAQRVLRPMFTV 536
H +VH DIKP N+ + + + + K+GD G R+ P
Sbjct: 130 HSMSLVHMDIKPSNIFISRTSIPNAASEEGDEDDWASNKVMFKIGDLGHVTRISSPQVEE 189
Query: 537 CGTPTYVAPEILNESGYGV-KIDVWAAGVILYILLCGFPPFVSDTNDQDELFDDILSGQY 595
G ++A E+L E+ + K D++A + + + G P + + E+ L
Sbjct: 190 -GDSRFLANEVLQENYTHLPKADIFALALTV-VCAAGAEPLPRNGDQWHEIRQGRLP--- 244
Query: 596 GFPSPYWDDISEEAKELISHMLESNPDLRFSAEDVLDHPWL 636
P +S+E EL+ M+ +P+ R SA ++ H L
Sbjct: 245 RIPQV----LSQEFTELLKVMIHPDPERRPSAMALVKHSVL 281
>pdb|1X8B|A Chain A, Structure Of Human Wee1a Kinase: Kinase Domain Complexed
With Inhibitor Pd0407824
Length = 289
Score = 66.2 bits (160), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 70/281 (24%), Positives = 119/281 (42%), Gaps = 45/281 (16%)
Query: 385 IGDGNFAVVRQVYDKHKDMDCALKIIDKSK--LLGKKQMIENEVNILRSV-------NHP 435
IG G F V+ K +D + I +SK L G +E N LR V H
Sbjct: 19 IGSGEFG---SVFKCVKRLDGCIYAIKRSKKPLAGSV----DEQNALREVYAHAVLGQHS 71
Query: 436 NIIKLLDEYDTNNELYLVIELIKGGDLFDAISKNVK----FSEEDSKFMTQSLASALSYL 491
++++ + ++ + + E GG L DAIS+N + F E + K + + L Y+
Sbjct: 72 HVVRYFSAWAEDDHMLIQNEYCNGGSLADAISENYRIMSYFKEAELKDLLLQVGRGLRYI 131
Query: 492 HDNYIVHRDIKPENLLVEMS---------------GCHVKVLKVGDFGLAQRVLRPMFTV 536
H +VH DIKP N+ + + + + K+GD G R+ P
Sbjct: 132 HSMSLVHMDIKPSNIFISRTSIPNAASEEGDEDDWASNKVMFKIGDLGHVTRISSPQVEE 191
Query: 537 CGTPTYVAPEILNESGYGV-KIDVWAAGVILYILLCGFPPFVSDTNDQDELFDDILSGQY 595
G ++A E+L E+ + K D++A + + + G P + + E+ L
Sbjct: 192 -GDSRFLANEVLQENYTHLPKADIFALALTV-VCAAGAEPLPRNGDQWHEIRQGRLP--- 246
Query: 596 GFPSPYWDDISEEAKELISHMLESNPDLRFSAEDVLDHPWL 636
P +S+E EL+ M+ +P+ R SA ++ H L
Sbjct: 247 RIPQV----LSQEFTELLKVMIHPDPERRPSAMALVKHSVL 283
>pdb|3C1X|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolotriazine Based Inhibitor
Length = 373
Score = 66.2 bits (160), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 60/226 (26%), Positives = 105/226 (46%), Gaps = 20/226 (8%)
Query: 372 PSKLLQRYSVGQIIGDGNFAVVRQ---VYDKHKDMDCALKIIDKSKLLGKKQMIENEVNI 428
PS L+ ++ ++IG G+F V + + K + CA+K +++ +G+ E I
Sbjct: 86 PSSLIVHFN--EVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGII 143
Query: 429 LRSVNHPNIIKLLDE-YDTNNELYLVIELIKGGDLFDAISKNVKF-SEEDSKFMTQSLAS 486
++ +HPN++ LL + +V+ +K GDL + I + +D +A
Sbjct: 144 MKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAK 203
Query: 487 ALSYLHDNYIVHRDIKPENLLVEMSGCHVKVLKVGDFGLAQRVLRPMFTVCGTPT----- 541
+ +L VHRD+ N +++ +KV DFGLA+ + F T
Sbjct: 204 GMKFLASKKFVHRDLAARNCMLDEK----FTVKVADFGLARDMYDKEFDSVHNKTGAKLP 259
Query: 542 --YVAPEILNESGYGVKIDVWAAGVILYILLC-GFPPFVSDTNDQD 584
++A E L + K DVW+ GV+L+ L+ G PP+ D N D
Sbjct: 260 VKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPY-PDVNTFD 304
>pdb|2Z2W|A Chain A, Humand Wee1 Kinase Complexed With Inhibitor Pf0335770
Length = 285
Score = 66.2 bits (160), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 69/278 (24%), Positives = 118/278 (42%), Gaps = 45/278 (16%)
Query: 385 IGDGNFAVVRQVYDKHKDMDCALKIIDKSK--LLGKKQMIENEVNILRSV-------NHP 435
IG G F V+ K +D + I +SK L G +E N LR V H
Sbjct: 15 IGSGEFG---SVFKCVKRLDGCIYAIKRSKKPLAGSV----DEQNALREVYAHAVLGQHS 67
Query: 436 NIIKLLDEYDTNNELYLVIELIKGGDLFDAISKNVK----FSEEDSKFMTQSLASALSYL 491
++++ + ++ + + E GG L DAIS+N + F E + K + + L Y+
Sbjct: 68 HVVRYFSAWAEDDHMLIQNEYCNGGSLADAISENYRIMSYFKEAELKDLLLQVGRGLRYI 127
Query: 492 HDNYIVHRDIKPENLLVEMS---------------GCHVKVLKVGDFGLAQRVLRPMFTV 536
H +VH DIKP N+ + + + + K+GD G R+ P
Sbjct: 128 HSMSLVHMDIKPSNIFISRTSIPNAASEEGDEDDWASNKVMFKIGDLGHVTRISSPQVEE 187
Query: 537 CGTPTYVAPEILNESGYGV-KIDVWAAGVILYILLCGFPPFVSDTNDQDELFDDILSGQY 595
G ++A E+L E+ + K D++A + + + G P + + E+ L
Sbjct: 188 -GDSRFLANEVLQENYTHLPKADIFALALTV-VXAAGAEPLPRNGDQWHEIRQGRLP--- 242
Query: 596 GFPSPYWDDISEEAKELISHMLESNPDLRFSAEDVLDH 633
P +S+E EL+ M+ +P+ R SA ++ H
Sbjct: 243 RIPQV----LSQEFTELLKVMIHPDPERRPSAMALVKH 276
>pdb|1P4O|A Chain A, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a
Resolution.
pdb|1P4O|B Chain B, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a
Resolution
Length = 322
Score = 65.9 bits (159), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 50/228 (21%), Positives = 106/228 (46%), Gaps = 25/228 (10%)
Query: 377 QRYSVGQIIGDGNFAVV-----RQVYDKHKDMDCALKIIDKSKLLGKKQMIENEVNILRS 431
++ ++ + +G G+F +V + V + A+K ++++ + ++ NE ++++
Sbjct: 25 EKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKE 84
Query: 432 VNHPNIIKLLDEYDTNNELYLVIELIKGGDLFD-------AISKNVKFSEEDSKFMTQ-- 482
N ++++LL +++EL+ GDL A++ N + M Q
Sbjct: 85 FNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQMA 144
Query: 483 -SLASALSYLHDNYIVHRDIKPENLLVEMSGCHVKVLKVGDFGLAQRVLRPMFTVCGTPT 541
+A ++YL+ N VHRD+ N +V +K+GDFG+ + + + G
Sbjct: 145 GEIADGMAYLNANKFVHRDLAARNCMV----AEDFTVKIGDFGMTRDIYETDYYRKGGKG 200
Query: 542 -----YVAPEILNESGYGVKIDVWAAGVILY-ILLCGFPPFVSDTNDQ 583
+++PE L + + DVW+ GV+L+ I P+ +N+Q
Sbjct: 201 LLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQ 248
>pdb|4E4L|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|E Chain E, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|D Chain D, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4N|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E4N|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E5W|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4E5W|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4EHZ|A Chain A, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|B Chain B, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|C Chain C, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|D Chain D, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EI4|A Chain A, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4EI4|B Chain B, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4FK6|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
pdb|4FK6|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
Length = 302
Score = 65.9 bits (159), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 60/200 (30%), Positives = 98/200 (49%), Gaps = 19/200 (9%)
Query: 385 IGDGNFAVVRQV-YDKHKD---MDCALKIIDKSKLLGKKQMIENEVNILRSVNHPNIIKL 440
+G+G+F V YD D A+K + ++ E+ ILR++ H NI+K
Sbjct: 29 LGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLKKEIEILRNLYHENIVKY 88
Query: 441 --LDEYDTNNELYLVIELIKGGDLFDAISKNV-KFS-EEDSKFMTQSLASALSYLHDNYI 496
+ D N + L++E + G L + + KN K + ++ K+ Q + + YL
Sbjct: 89 KGICTEDGGNGIKLIMEFLPSGSLKEYLPKNKNKINLKQQLKYAVQ-ICKGMDYLGSRQY 147
Query: 497 VHRDIKPENLLVEMSGCHVKVLKVGDFGLAQRVL--RPMFTVCG---TPT-YVAPEILNE 550
VHRD+ N+LVE +K+GDFGL + + + TV +P + APE L +
Sbjct: 148 VHRDLAARNVLVESE----HQVKIGDFGLTKAIETDKEXXTVKDDRDSPVFWYAPECLMQ 203
Query: 551 SGYGVKIDVWAAGVILYILL 570
S + + DVW+ GV L+ LL
Sbjct: 204 SKFYIASDVWSFGVTLHELL 223
>pdb|3LCD|A Chain A, Inhibitor Bound To A Dfg-In Structure Of The Kinase Domain
Of Csf-1r
Length = 329
Score = 65.9 bits (159), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 57/232 (24%), Positives = 109/232 (46%), Gaps = 29/232 (12%)
Query: 367 ENLNIPSKLLQRYSVGQIIGDGNFAVVRQV--YDKHKD---MDCALKIIDKSKLLGKKQM 421
E P LQ G+ +G G F V + + K+ + A+K++ + +K+
Sbjct: 39 EKWEFPRNNLQ---FGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEA 95
Query: 422 IENEVNILRSVN-HPNIIKLLDEYDTNNELYLVIELIKGGDLFDAISKNVK--FSEEDSK 478
+ +E+ I+ + H NI+ LL + ++ E GDL + + + + +ED +
Sbjct: 96 LMSELKIMSHLGQHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKAEADLDKEDGR 155
Query: 479 --------FMTQSLASALSYLHDNYIVHRDIKPENLLVEMSGCHVKVLKVGDFGLAQRVL 530
+ +A +++L +HRD+ N+L ++ HV K+GDFGLA+ ++
Sbjct: 156 PLELRDLLHFSSQVAQGMAFLASKNCIHRDVAARNVL--LTNGHVA--KIGDFGLARDIM 211
Query: 531 R-PMFTVCGTP----TYVAPEILNESGYGVKIDVWAAGVILY-ILLCGFPPF 576
+ V G ++APE + + Y V+ DVW+ G++L+ I G P+
Sbjct: 212 NDSNYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFSLGLNPY 263
>pdb|3EYG|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3EYH|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 290
Score = 65.9 bits (159), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 60/200 (30%), Positives = 98/200 (49%), Gaps = 19/200 (9%)
Query: 385 IGDGNFAVVRQV-YDKHKD---MDCALKIIDKSKLLGKKQMIENEVNILRSVNHPNIIKL 440
+G+G+F V YD D A+K + ++ E+ ILR++ H NI+K
Sbjct: 17 LGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLKKEIEILRNLYHENIVKY 76
Query: 441 --LDEYDTNNELYLVIELIKGGDLFDAISKNV-KFS-EEDSKFMTQSLASALSYLHDNYI 496
+ D N + L++E + G L + + KN K + ++ K+ Q + + YL
Sbjct: 77 KGICTEDGGNGIKLIMEFLPSGSLKEYLPKNKNKINLKQQLKYAVQ-ICKGMDYLGSRQY 135
Query: 497 VHRDIKPENLLVEMSGCHVKVLKVGDFGLAQRVL--RPMFTVCG---TPT-YVAPEILNE 550
VHRD+ N+LVE +K+GDFGL + + + TV +P + APE L +
Sbjct: 136 VHRDLAARNVLVESE----HQVKIGDFGLTKAIETDKEXXTVKDDRDSPVFWYAPECLMQ 191
Query: 551 SGYGVKIDVWAAGVILYILL 570
S + + DVW+ GV L+ LL
Sbjct: 192 SKFYIASDVWSFGVTLHELL 211
>pdb|2HEL|A Chain A, Crystal Structure Of A Mutant Epha4 Kinase Domain (Y742a)
Length = 306
Score = 65.5 bits (158), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 62/232 (26%), Positives = 108/232 (46%), Gaps = 20/232 (8%)
Query: 381 VGQIIGDGNFAVV---RQVYDKHKDMDCALKIIDKSKLLGKKQMIENEVNILRSVNHPNI 437
+ ++IG G F V R +++ A+K + +++ +E +I+ +HPNI
Sbjct: 33 IEKVIGVGEFGEVCSGRLKVPGKREICVAIKTLKAGYTDKQRRDFLSEASIMGQFDHPNI 92
Query: 438 IKLLDEYDTNNELYLVIELIKGGDLFDAISKN-VKFSEEDSKFMTQSLASALSYLHDNYI 496
I L + ++ E ++ G L + KN +F+ M + + S + YL D
Sbjct: 93 IHLEGVVTKCKPVMIITEYMENGSLDAFLRKNDGRFTVIQLVGMLRGIGSGMKYLSDMSA 152
Query: 497 VHRDIKPENLLVEMSGCHVKVLKVGDFGLAQRVL----RPMFTVCGTPT---YVAPEILN 549
VHRD+ N+LV + V KV DFG++ RVL +T G + APE +
Sbjct: 153 VHRDLAARNILVNSN----LVCKVSDFGMS-RVLEDDPEAAYTTRGGKIPIRWTAPEAIA 207
Query: 550 ESGYGVKIDVWAAGVILY-ILLCGFPPFVSDTNDQDELFDDILSGQYGFPSP 600
+ DVW+ G++++ ++ G P+ D ++QD + I G Y P P
Sbjct: 208 YRKFTSASDVWSYGIVMWEVMSYGERPY-WDMSNQD-VIKAIEEG-YRLPPP 256
>pdb|2OGV|A Chain A, Crystal Structure Of The Autoinhibited Human C-Fms Kinase
Domain
Length = 317
Score = 65.5 bits (158), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 57/232 (24%), Positives = 109/232 (46%), Gaps = 29/232 (12%)
Query: 367 ENLNIPSKLLQRYSVGQIIGDGNFAVVRQV--YDKHKD---MDCALKIIDKSKLLGKKQM 421
E P LQ G+ +G G F V + + K+ + A+K++ + +K+
Sbjct: 31 EKWEFPRNNLQ---FGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEA 87
Query: 422 IENEVNILRSVN-HPNIIKLLDEYDTNNELYLVIELIKGGDLFDAISKNVK--FSEEDSK 478
+ +E+ I+ + H NI+ LL + ++ E GDL + + + + +ED +
Sbjct: 88 LMSELKIMSHLGQHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKAEADLDKEDGR 147
Query: 479 --------FMTQSLASALSYLHDNYIVHRDIKPENLLVEMSGCHVKVLKVGDFGLAQRVL 530
+ +A +++L +HRD+ N+L ++ HV K+GDFGLA+ ++
Sbjct: 148 PLELRDLLHFSSQVAQGMAFLASKNCIHRDVAARNVL--LTNGHVA--KIGDFGLARDIM 203
Query: 531 R-PMFTVCGTP----TYVAPEILNESGYGVKIDVWAAGVILY-ILLCGFPPF 576
+ V G ++APE + + Y V+ DVW+ G++L+ I G P+
Sbjct: 204 NDSNYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFSLGLNPY 255
>pdb|2Y6M|A Chain A, Crystal Structure Of Epha4 Kinase Domain
pdb|2Y6O|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Dasatinib
Length = 291
Score = 65.5 bits (158), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 62/232 (26%), Positives = 108/232 (46%), Gaps = 20/232 (8%)
Query: 381 VGQIIGDGNFAVV---RQVYDKHKDMDCALKIIDKSKLLGKKQMIENEVNILRSVNHPNI 437
+ ++IG G F V R +++ A+K + +++ +E +I+ +HPNI
Sbjct: 18 IEKVIGVGEFGEVCSGRLKVPGKREICVAIKTLKAGYTDKQRRDFLSEASIMGQFDHPNI 77
Query: 438 IKLLDEYDTNNELYLVIELIKGGDLFDAISKN-VKFSEEDSKFMTQSLASALSYLHDNYI 496
I L + ++ E ++ G L + KN +F+ M + + S + YL D
Sbjct: 78 IHLEGVVTKCKPVMIITEYMENGSLDAFLRKNDGRFTVIQLVGMLRGIGSGMKYLSDMSY 137
Query: 497 VHRDIKPENLLVEMSGCHVKVLKVGDFGLAQRVL----RPMFTVCGTPT---YVAPEILN 549
VHRD+ N+LV + V KV DFG++ RVL +T G + APE +
Sbjct: 138 VHRDLAARNILVNSN----LVCKVSDFGMS-RVLEDDPEAAYTTRGGKIPIRWTAPEAIA 192
Query: 550 ESGYGVKIDVWAAGVILY-ILLCGFPPFVSDTNDQDELFDDILSGQYGFPSP 600
+ DVW+ G++++ ++ G P+ D ++QD + I G Y P P
Sbjct: 193 YRKFTSASDVWSYGIVMWEVMSYGERPY-WDMSNQD-VIKAIEEG-YRLPPP 241
>pdb|3UIU|A Chain A, Crystal Structure Of Apo-Pkr Kinase Domain
pdb|3UIU|B Chain B, Crystal Structure Of Apo-Pkr Kinase Domain
Length = 306
Score = 65.5 bits (158), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 70/285 (24%), Positives = 119/285 (41%), Gaps = 58/285 (20%)
Query: 383 QIIGDGNFAVVRQVYDKHKDMDCALKIIDKSKLLGKKQMIENEVNILRSVNHPNIIKL-- 440
++IG G F QV+ +D +I + K +K E EV L ++H NI+
Sbjct: 18 ELIGSGGFG---QVFKAKHRIDGKTYVIRRVKYNNEKA--EREVKALAKLDHVNIVHYNG 72
Query: 441 -----------------LDEYDTNNE----------LYLVIELIKGGDLFDAISKNVKFS 473
+YD N L++ +E G L I K +
Sbjct: 73 CWDGFDYDPETSDDSLESSDYDPENSKNSSRSKTKCLFIQMEFCDKGTLEQWIEK--RRG 130
Query: 474 EEDSKFMT----QSLASALSYLHDNYIVHRDIKPENLLVEMSGCHVKVLKVGDFGLAQRV 529
E+ K + + + + Y+H ++HRD+KP N+ + K +K+GDFGL +
Sbjct: 131 EKLDKVLALELFEQITKGVDYIHSKKLIHRDLKPSNIFL----VDTKQVKIGDFGLVTSL 186
Query: 530 LR--PMFTVCGTPTYVAPEILNESGYGVKIDVWAAGVILYILLCGFPPFVSDTN-DQDEL 586
GT Y++PE ++ YG ++D++A G+IL LL V DT + +
Sbjct: 187 KNDGKRTRSKGTLRYMSPEQISSQDYGKEVDLYALGLILAELL-----HVCDTAFETSKF 241
Query: 587 FDDILSGQYGFPSPYWDDISEEAKELISHMLESNPDLRFSAEDVL 631
F D+ G D ++ K L+ +L P+ R + ++L
Sbjct: 242 FTDLRDGIIS------DIFDKKEKTLLQKLLSKKPEDRPNTSEIL 280
>pdb|3LW0|A Chain A, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|B Chain B, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|C Chain C, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|D Chain D, Igf-1rk In Complex With Ligand Msc1609119a-1
Length = 304
Score = 65.5 bits (158), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 50/228 (21%), Positives = 106/228 (46%), Gaps = 25/228 (10%)
Query: 377 QRYSVGQIIGDGNFAVV-----RQVYDKHKDMDCALKIIDKSKLLGKKQMIENEVNILRS 431
++ ++ + +G G+F +V + V + A+K ++++ + ++ NE ++++
Sbjct: 15 EKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKE 74
Query: 432 VNHPNIIKLLDEYDTNNELYLVIELIKGGDLFD-------AISKNVKFSEEDSKFMTQ-- 482
N ++++LL +++EL+ GDL A++ N + M Q
Sbjct: 75 FNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQMA 134
Query: 483 -SLASALSYLHDNYIVHRDIKPENLLVEMSGCHVKVLKVGDFGLAQRVLRPMFTVCGTPT 541
+A ++YL+ N VHRD+ N +V +K+GDFG+ + + + G
Sbjct: 135 GEIADGMAYLNANKFVHRDLAARNCMV----AEDFTVKIGDFGMTRDIYETDYYRKGGKG 190
Query: 542 -----YVAPEILNESGYGVKIDVWAAGVILY-ILLCGFPPFVSDTNDQ 583
+++PE L + + DVW+ GV+L+ I P+ +N+Q
Sbjct: 191 LLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQ 238
>pdb|3Q6W|A Chain A, Structure Of Dually-phosphorylated Met Receptor Kinase In
Complex With An Mk-2461 Analog With Specificity For The
Activated Receptor
pdb|3R7O|A Chain A, Structure Of Dually Phosphorylated C-Met Receptor Kinase
In Complex With An Mk-2461 Analog
Length = 307
Score = 65.5 bits (158), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 63/230 (27%), Positives = 106/230 (46%), Gaps = 28/230 (12%)
Query: 372 PSKLLQRYSVGQIIGDGNFAVVRQ---VYDKHKDMDCALKIIDKSKLLGKKQMIENEVNI 428
PS L+ ++ ++IG G+F V + + K + CA+K +++ +G+ E I
Sbjct: 26 PSSLIVHFN--EVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGII 83
Query: 429 LRSVNHPNIIKLLDE-YDTNNELYLVIELIKGGDLFDAISKNVKF-SEEDSKFMTQSLAS 486
++ +HPN++ LL + +V+ +K GDL + I + +D +A
Sbjct: 84 MKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAK 143
Query: 487 ALSYLHDNYIVHRDIKPENLLVEMSGCHVKVLKVGDFGLAQRVLRPMF----------TV 536
+ YL VHRD+ N +++ +KV DFGLA R M+ T
Sbjct: 144 GMKYLASKKFVHRDLAARNCMLDEK----FTVKVADFGLA----RDMYDKEXXSVHNKTG 195
Query: 537 CGTPT-YVAPEILNESGYGVKIDVWAAGVILYILLC-GFPPFVSDTNDQD 584
P ++A E L + K DVW+ GV+L+ L+ G PP+ D N D
Sbjct: 196 AKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPY-PDVNTFD 244
>pdb|2XYU|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Vuf 12058
Length = 285
Score = 65.5 bits (158), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 62/232 (26%), Positives = 108/232 (46%), Gaps = 20/232 (8%)
Query: 381 VGQIIGDGNFAVV---RQVYDKHKDMDCALKIIDKSKLLGKKQMIENEVNILRSVNHPNI 437
+ ++IG G F V R +++ A+K + +++ +E +I+ +HPNI
Sbjct: 12 IEKVIGVGEFGEVCSGRLKVPGKREICVAIKTLKAGYTDKQRRDFLSEASIMGQFDHPNI 71
Query: 438 IKLLDEYDTNNELYLVIELIKGGDLFDAISKN-VKFSEEDSKFMTQSLASALSYLHDNYI 496
I L + ++ E ++ G L + KN +F+ M + + S + YL D
Sbjct: 72 IHLEGVVTKCKPVMIITEYMENGSLDAFLRKNDGRFTVIQLVGMLRGIGSGMKYLSDMSY 131
Query: 497 VHRDIKPENLLVEMSGCHVKVLKVGDFGLAQRVL----RPMFTVCGTPT---YVAPEILN 549
VHRD+ N+LV + V KV DFG++ RVL +T G + APE +
Sbjct: 132 VHRDLAARNILVNSN----LVCKVSDFGMS-RVLEDDPEAAYTTRGGKIPIRWTAPEAIA 186
Query: 550 ESGYGVKIDVWAAGVILY-ILLCGFPPFVSDTNDQDELFDDILSGQYGFPSP 600
+ DVW+ G++++ ++ G P+ D ++QD + I G Y P P
Sbjct: 187 YRKFTSASDVWSYGIVMWEVMSYGERPY-WDMSNQD-VIKAIEEG-YRLPPP 235
>pdb|3VN9|A Chain A, Rifined Crystal Structure Of Non-Phosphorylated Map2k6 In
A Putative Auto-Inhibition State
Length = 340
Score = 65.5 bits (158), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 63/263 (23%), Positives = 119/263 (45%), Gaps = 18/263 (6%)
Query: 385 IGDGNFAVVRQVYDKHKDMDCALKIIDKSKLLGKKQMIENEVNI-LRSVNHPNIIKLLDE 443
+G G + VV ++ A+K I + +++ + +++I +R+V+ P +
Sbjct: 59 LGRGAYGVVEKMRHVPSGQIMAVKRIRATVNSQEQKRLLMDLDISMRTVDCPFTVTFYGA 118
Query: 444 YDTNNELYLVIELIKGG-DLF--DAISKNVKFSEEDSKFMTQSLASALSYLHDNY-IVHR 499
++++ +EL+ D F I K E+ + S+ AL +LH ++HR
Sbjct: 119 LFREGDVWICMELMDTSLDKFYKQVIDKGQTIPEDILGKIAVSIVKALEHLHSKLSVIHR 178
Query: 500 DIKPENLLVEMSGCHVKVLKVGDFGLAQRVLRPMFTV--CGTPTYVAPEI----LNESGY 553
D+KP N+L+ G +K+ DFG++ ++ + G Y+APE LN+ GY
Sbjct: 179 DVKPSNVLINALG----QVKMCDFGISGYLVDSVAKTIDAGCKPYMAPERINPELNQKGY 234
Query: 554 GVKIDVWAAGVILYILLCGFPPFVSDTNDQDELFDDILSGQYGFPSPYWDDISEEAKELI 613
VK D+W+ G+ + L P+ S +L + P+ D S E +
Sbjct: 235 SVKSDIWSLGITMIELAILRFPYDSWGTPFQQLKQVVEEPSPQLPA---DKFSAEFVDFT 291
Query: 614 SHMLESNPDLRFSAEDVLDHPWL 636
S L+ N R + +++ HP+
Sbjct: 292 SQCLKKNSKERPTYPELMQHPFF 314
>pdb|2OFV|A Chain A, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|2OFV|B Chain B, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|3B2W|A Chain A, Crystal Structure Of Pyrimidine Amide 11 Bound To Lck
Length = 277
Score = 65.5 bits (158), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 64/259 (24%), Positives = 120/259 (46%), Gaps = 28/259 (10%)
Query: 374 KLLQRYSVGQIIGDGNFAVVRQVYDKHKDMDCALKIIDKSKLLGKKQMIENEVNILRSVN 433
KL++R GQ G+ V Y+ H + A+K + + + E N+++ +
Sbjct: 21 KLVERLGAGQF-GE----VWMGYYNGHTKV--AVKSLKQGSM--SPDAFLAEANLMKQLQ 71
Query: 434 HPNIIKLLDEYDTNNELYLVIELIKGGDLFDAIS--KNVKFSEEDSKFMTQSLASALSYL 491
H +++L T +Y++ E ++ G L D + +K + M +A ++++
Sbjct: 72 HQRLVRLY-AVVTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFI 130
Query: 492 HDNYIVHRDIKPENLLV-EMSGCHVKVLKVGDFGLAQRVLRPMFTV---CGTPT-YVAPE 546
+ +HRD++ N+LV + C K+ DFGLA+ + +T P + APE
Sbjct: 131 EERNYIHRDLRAANILVSDTLSC-----KIADFGLARLIEDNEYTAREGAKFPIKWTAPE 185
Query: 547 ILNESGYGVKIDVWAAGVILY-ILLCGFPPFVSDTNDQDELFDDILSGQYGFPSPYWDDI 605
+N + +K DVW+ G++L I+ G P+ TN E+ ++ G Y P D+
Sbjct: 186 AINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTN--PEVIQNLERG-YRMVRP--DNC 240
Query: 606 SEEAKELISHMLESNPDLR 624
EE +L+ + P+ R
Sbjct: 241 PEELYQLMRLCWKERPEDR 259
>pdb|3BYS|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Amide 10b
pdb|3BYU|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Reverse
Amide 23
Length = 277
Score = 65.5 bits (158), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 64/259 (24%), Positives = 120/259 (46%), Gaps = 28/259 (10%)
Query: 374 KLLQRYSVGQIIGDGNFAVVRQVYDKHKDMDCALKIIDKSKLLGKKQMIENEVNILRSVN 433
KL++R GQ G+ V Y+ H + A+K + + + E N+++ +
Sbjct: 22 KLVERLGAGQF-GE----VWMGYYNGHTKV--AVKSLKQGSM--SPDAFLAEANLMKQLQ 72
Query: 434 HPNIIKLLDEYDTNNELYLVIELIKGGDLFDAIS--KNVKFSEEDSKFMTQSLASALSYL 491
H +++L T +Y++ E ++ G L D + +K + M +A ++++
Sbjct: 73 HQRLVRLY-AVVTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFI 131
Query: 492 HDNYIVHRDIKPENLLV-EMSGCHVKVLKVGDFGLAQRVLRPMFTV---CGTPT-YVAPE 546
+ +HRD++ N+LV + C K+ DFGLA+ + +T P + APE
Sbjct: 132 EERNYIHRDLRAANILVSDTLSC-----KIADFGLARLIEDNEYTAREGAKFPIKWTAPE 186
Query: 547 ILNESGYGVKIDVWAAGVILY-ILLCGFPPFVSDTNDQDELFDDILSGQYGFPSPYWDDI 605
+N + +K DVW+ G++L I+ G P+ TN E+ ++ G Y P D+
Sbjct: 187 AINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTN--PEVIQNLERG-YRMVRP--DNC 241
Query: 606 SEEAKELISHMLESNPDLR 624
EE +L+ + P+ R
Sbjct: 242 PEELYQLMRLCWKERPEDR 260
>pdb|2PL0|A Chain A, Lck Bound To Imatinib
Length = 289
Score = 65.5 bits (158), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 64/259 (24%), Positives = 120/259 (46%), Gaps = 28/259 (10%)
Query: 374 KLLQRYSVGQIIGDGNFAVVRQVYDKHKDMDCALKIIDKSKLLGKKQMIENEVNILRSVN 433
KL++R GQ G+ V Y+ H + A+K + + + E N+++ +
Sbjct: 26 KLVERLGAGQF-GE----VWMGYYNGHTKV--AVKSLKQGSM--SPDAFLAEANLMKQLQ 76
Query: 434 HPNIIKLLDEYDTNNELYLVIELIKGGDLFDAIS--KNVKFSEEDSKFMTQSLASALSYL 491
H +++L T +Y++ E ++ G L D + +K + M +A ++++
Sbjct: 77 HQRLVRLY-AVVTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFI 135
Query: 492 HDNYIVHRDIKPENLLV-EMSGCHVKVLKVGDFGLAQRVLRPMFTV---CGTPT-YVAPE 546
+ +HRD++ N+LV + C K+ DFGLA+ + +T P + APE
Sbjct: 136 EERNYIHRDLRAANILVSDTLSC-----KIADFGLARLIEDNEYTAREGAKFPIKWTAPE 190
Query: 547 ILNESGYGVKIDVWAAGVILY-ILLCGFPPFVSDTNDQDELFDDILSGQYGFPSPYWDDI 605
+N + +K DVW+ G++L I+ G P+ TN E+ ++ G Y P D+
Sbjct: 191 AINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTN--PEVIQNLERG-YRMVRP--DNC 245
Query: 606 SEEAKELISHMLESNPDLR 624
EE +L+ + P+ R
Sbjct: 246 PEELYQLMRLCWKERPEDR 264
>pdb|2OF2|A Chain A, Crystal Structure Of Furanopyrimidine 8 Bound To Lck
pdb|2OF4|A Chain A, Crystal Structure Of Furanopyrimidine 1 Bound To Lck
Length = 271
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 64/259 (24%), Positives = 120/259 (46%), Gaps = 28/259 (10%)
Query: 374 KLLQRYSVGQIIGDGNFAVVRQVYDKHKDMDCALKIIDKSKLLGKKQMIENEVNILRSVN 433
KL++R GQ G+ V Y+ H + A+K + + + E N+++ +
Sbjct: 16 KLVERLGAGQF-GE----VWMGYYNGHTKV--AVKSLKQGSM--SPDAFLAEANLMKQLQ 66
Query: 434 HPNIIKLLDEYDTNNELYLVIELIKGGDLFDAIS--KNVKFSEEDSKFMTQSLASALSYL 491
H +++L T +Y++ E ++ G L D + +K + M +A ++++
Sbjct: 67 HQRLVRLY-AVVTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFI 125
Query: 492 HDNYIVHRDIKPENLLV-EMSGCHVKVLKVGDFGLAQRVLRPMFTV---CGTPT-YVAPE 546
+ +HRD++ N+LV + C K+ DFGLA+ + +T P + APE
Sbjct: 126 EERNYIHRDLRAANILVSDTLSC-----KIADFGLARLIEDNEYTAREGAKFPIKWTAPE 180
Query: 547 ILNESGYGVKIDVWAAGVILY-ILLCGFPPFVSDTNDQDELFDDILSGQYGFPSPYWDDI 605
+N + +K DVW+ G++L I+ G P+ TN E+ ++ G Y P D+
Sbjct: 181 AINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTN--PEVIQNLERG-YRMVRP--DNC 235
Query: 606 SEEAKELISHMLESNPDLR 624
EE +L+ + P+ R
Sbjct: 236 PEELYQLMRLCWKERPEDR 254
>pdb|1U59|A Chain A, Crystal Structure Of The Zap-70 Kinase Domain In Complex
With Staurosporine
Length = 287
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 49/192 (25%), Positives = 91/192 (47%), Gaps = 14/192 (7%)
Query: 385 IGDGNFAVVRQ-VYD-KHKDMDCALKIIDKSKLLGKKQMIENEVNILRSVNHPNIIKLLD 442
+G GNF VRQ VY + K +D A+K++ + + + E I+ +++P I++L+
Sbjct: 18 LGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLIG 77
Query: 443 EYDTNNELYLVIELIKGGDLFD-AISKNVKFSEEDSKFMTQSLASALSYLHDNYIVHRDI 501
L LV+E+ GG L + K + + + ++ + YL + VHRD+
Sbjct: 78 VCQAEA-LMLVMEMAGGGPLHKFLVGKREEIPVSNVAELLHQVSMGMKYLEEKNFVHRDL 136
Query: 502 KPENLLVEMSGCHVKVLKVGDFGLAQRV-----LRPMFTVCGTP-TYVAPEILNESGYGV 555
N+L+ + K+ DFGL++ + + P + APE +N +
Sbjct: 137 AARNVLL----VNRHYAKISDFGLSKALGADDSYYTARSAGKWPLKWYAPECINFRKFSS 192
Query: 556 KIDVWAAGVILY 567
+ DVW+ GV ++
Sbjct: 193 RSDVWSYGVTMW 204
>pdb|2HEN|A Chain A, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|B Chain B, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|C Chain C, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|D Chain D, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
Length = 286
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 60/234 (25%), Positives = 109/234 (46%), Gaps = 22/234 (9%)
Query: 381 VGQIIGDGNFAVVRQVYDK---HKDMDCALKIIDKSKLLGKKQMIENEVNILRSVNHPNI 437
+ Q+IG G F V + K +++ A+K + +++ +E +I+ +HPN+
Sbjct: 11 IEQVIGAGEFGEVCSGHLKLPGKREIFVAIKTLKSGYTEKQRRDFLSEASIMGQFDHPNV 70
Query: 438 IKLLDEYDTNNELYLVIELIKGGDLFDAISKN-VKFSEEDSKFMTQSLASALSYLHDNYI 496
I L + + ++ E ++ G L + +N +F+ M + +A+ + YL D
Sbjct: 71 IHLEGVVTKSTPVMIITEFMENGSLDSFLRQNDGQFTVIQLVGMLRGIAAGMKYLADMNY 130
Query: 497 VHRDIKPENLLVEMSGCHVKVLKVGDFGLAQRVLR-----PMFTVC---GTPT-YVAPEI 547
VHR + N+LV + V KV DFGL+ R L P +T P + APE
Sbjct: 131 VHRALAARNILVNSN----LVCKVSDFGLS-RFLEDDTSDPTYTSALGGKIPIRWTAPEA 185
Query: 548 LNESGYGVKIDVWAAGVILY-ILLCGFPPFVSDTNDQDELFDDILSGQYGFPSP 600
+ + DVW+ G++++ ++ G P+ TN QD + + + Y P P
Sbjct: 186 IQYRKFTSASDVWSYGIVMWEVMSYGERPYWDMTN-QDVI--NAIEQDYRLPPP 236
>pdb|2OG8|A Chain A, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
pdb|2OG8|B Chain B, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
Length = 265
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 64/259 (24%), Positives = 120/259 (46%), Gaps = 28/259 (10%)
Query: 374 KLLQRYSVGQIIGDGNFAVVRQVYDKHKDMDCALKIIDKSKLLGKKQMIENEVNILRSVN 433
KL++R GQ G+ V Y+ H + A+K + + + E N+++ +
Sbjct: 11 KLVERLGAGQF-GE----VWMGYYNGHTKV--AVKSLKQGSM--SPDAFLAEANLMKQLQ 61
Query: 434 HPNIIKLLDEYDTNNELYLVIELIKGGDLFDAIS--KNVKFSEEDSKFMTQSLASALSYL 491
H +++L T +Y++ E ++ G L D + +K + M +A ++++
Sbjct: 62 HQRLVRLY-AVVTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFI 120
Query: 492 HDNYIVHRDIKPENLLV-EMSGCHVKVLKVGDFGLAQRVLRPMFTV---CGTPT-YVAPE 546
+ +HRD++ N+LV + C K+ DFGLA+ + +T P + APE
Sbjct: 121 EERNYIHRDLRAANILVSDTLSC-----KIADFGLARLIEDNEYTAREGAKFPIKWTAPE 175
Query: 547 ILNESGYGVKIDVWAAGVILY-ILLCGFPPFVSDTNDQDELFDDILSGQYGFPSPYWDDI 605
+N + +K DVW+ G++L I+ G P+ TN E+ ++ G Y P D+
Sbjct: 176 AINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTN--PEVIQNLERG-YRMVRP--DNC 230
Query: 606 SEEAKELISHMLESNPDLR 624
EE +L+ + P+ R
Sbjct: 231 PEELYQLMRLCWKERPEDR 249
>pdb|3UIB|A Chain A, Map Kinase Lmampk10 From Leishmania Major In Complex With
Sb203580
Length = 362
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 75/309 (24%), Positives = 128/309 (41%), Gaps = 61/309 (19%)
Query: 379 YSVGQIIGDGNFAVVRQVYDKHKDMDCALKIIDKSKLLGKK----------QMIENEVNI 428
Y+V + I G++ V D + + A+K + + G+ + + E+ +
Sbjct: 24 YTVQRFISSGSYGAVCAGVDS-EGIPVAIKRVFNTVSDGRTVNILSDSFLCKRVLREIRL 82
Query: 429 LRSVNHPNIIKLLD-----EYDTNNELYLVIELIKGGDLFDAIS-KNVKFSEEDSKFMTQ 482
L +HPNI+ L D E ++LYLV EL++ DL I + + S + ++
Sbjct: 83 LNHFHHPNILGLRDIFVHFEEPAMHKLYLVTELMRT-DLAQVIHDQRIVISPQHIQYFMY 141
Query: 483 SLASALSYLHDNYIVHRDIKPENLLVEMSGCHVKVLKVGDFGLAQRVLRPMFTVCGTPT- 541
+ L LH+ +VHRD+ P N+L+ + + + DF LA+ T T
Sbjct: 142 HILLGLHVLHEAGVVHRDLHPGNILLADNND----ITICDFNLARED-----TADANKTH 192
Query: 542 ------YVAPEILNE-SGYGVKIDVWAAGVIL---------------YILLCGFPPFVSD 579
Y APE++ + G+ +D+W+AG ++ Y L V
Sbjct: 193 YVTHRWYRAPELVMQFKGFTKLVDMWSAGCVMAEMFNRKALFRGSTFYNQLNKIVEVVGT 252
Query: 580 TNDQDELF-------DDILSGQYGFPSPYWDDISEEAK----ELISHMLESNPDLRFSAE 628
+D + D + + P+ W + A +LI+ MLE NP R S E
Sbjct: 253 PKIEDVVMFSSPSARDYLRNSLSNVPARAWTAVVPTADPVALDLIAKMLEFNPQRRISTE 312
Query: 629 DVLDHPWLE 637
L HP+ E
Sbjct: 313 QALRHPYFE 321
>pdb|2OZO|A Chain A, Autoinhibited Intact Human Zap-70
Length = 613
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 48/192 (25%), Positives = 91/192 (47%), Gaps = 14/192 (7%)
Query: 385 IGDGNFAVVRQ-VYD-KHKDMDCALKIIDKSKLLGKKQMIENEVNILRSVNHPNIIKLLD 442
+G GNF VRQ VY + K +D A+K++ + + + E I+ +++P I++L+
Sbjct: 344 LGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLIG 403
Query: 443 EYDTNNELYLVIELIKGGDLFD-AISKNVKFSEEDSKFMTQSLASALSYLHDNYIVHRDI 501
L LV+E+ GG L + K + + + ++ + YL + VHR++
Sbjct: 404 VCQAEA-LMLVMEMAGGGPLHKFLVGKREEIPVSNVAELLHQVSMGMKYLEEKNFVHRNL 462
Query: 502 KPENLLVEMSGCHVKVLKVGDFGLAQRV-----LRPMFTVCGTP-TYVAPEILNESGYGV 555
N+L+ + K+ DFGL++ + + P + APE +N +
Sbjct: 463 AARNVLL----VNRHYAKISDFGLSKALGADDSYYTARSAGKWPLKWYAPECINFRKFSS 518
Query: 556 KIDVWAAGVILY 567
+ DVW+ GV ++
Sbjct: 519 RSDVWSYGVTMW 530
>pdb|3O23|A Chain A, Human Unphosphorylated Igf1-R Kinase Domain In Complex
With An Hydantoin Inhibitor
Length = 305
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 48/229 (20%), Positives = 108/229 (47%), Gaps = 27/229 (11%)
Query: 377 QRYSVGQIIGDGNFAVV-----RQVYDKHKDMDCALKIIDKSKLLGKKQMIENEVNILRS 431
++ ++ + +G G+F +V + V + A+K ++++ + ++ NE ++++
Sbjct: 16 EKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKE 75
Query: 432 VNHPNIIKLLDEYDTNNELYLVIELIKGGDLFDAISKNVKFSEEDSKF-----------M 480
N ++++LL +++EL+ GDL + ++++ E++ M
Sbjct: 76 FNCHHVVRLLGVVSQGQPTLVIMELMTRGDL-KSYLRSLRPEMENNPVLAPPSLSKMIQM 134
Query: 481 TQSLASALSYLHDNYIVHRDIKPENLLVEMSGCHVKVLKVGDFGLAQRVLRPMFTVCGTP 540
+A ++YL+ N VHRD+ N +V +K+GDFG+ + + + G
Sbjct: 135 AGEIADGMAYLNANKFVHRDLAARNCMV----AEDFTVKIGDFGMTRDIYETDYYRKGGK 190
Query: 541 T-----YVAPEILNESGYGVKIDVWAAGVILY-ILLCGFPPFVSDTNDQ 583
+++PE L + + DVW+ GV+L+ I P+ +N+Q
Sbjct: 191 GLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQ 239
>pdb|3QQU|A Chain A, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|B Chain B, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|C Chain C, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|D Chain D, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
Length = 301
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 48/229 (20%), Positives = 108/229 (47%), Gaps = 27/229 (11%)
Query: 377 QRYSVGQIIGDGNFAVV-----RQVYDKHKDMDCALKIIDKSKLLGKKQMIENEVNILRS 431
++ ++ + +G G+F +V + V + A+K ++++ + ++ NE ++++
Sbjct: 12 EKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKE 71
Query: 432 VNHPNIIKLLDEYDTNNELYLVIELIKGGDLFDAISKNVKFSEEDSKF-----------M 480
N ++++LL +++EL+ GDL + ++++ E++ M
Sbjct: 72 FNCHHVVRLLGVVSQGQPTLVIMELMTRGDL-KSYLRSLRPEMENNPVLAPPSLSKMIQM 130
Query: 481 TQSLASALSYLHDNYIVHRDIKPENLLVEMSGCHVKVLKVGDFGLAQRVLRPMFTVCGTP 540
+A ++YL+ N VHRD+ N +V +K+GDFG+ + + + G
Sbjct: 131 AGEIADGMAYLNANKFVHRDLAARNCMV----AEDFTVKIGDFGMTRDIYETDYYRKGGK 186
Query: 541 T-----YVAPEILNESGYGVKIDVWAAGVILY-ILLCGFPPFVSDTNDQ 583
+++PE L + + DVW+ GV+L+ I P+ +N+Q
Sbjct: 187 GLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQ 235
>pdb|3PG1|A Chain A, Map Kinase Lmampk10 From Leishmania Major (1.95 Angs
Resolution)
Length = 362
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 75/309 (24%), Positives = 128/309 (41%), Gaps = 61/309 (19%)
Query: 379 YSVGQIIGDGNFAVVRQVYDKHKDMDCALKIIDKSKLLGKK----------QMIENEVNI 428
Y+V + I G++ V D + + A+K + + G+ + + E+ +
Sbjct: 24 YTVQRFISSGSYGAVCAGVDS-EGIPVAIKRVFNTVSDGRTVNILSDSFLCKRVLREIRL 82
Query: 429 LRSVNHPNIIKLLD-----EYDTNNELYLVIELIKGGDLFDAIS-KNVKFSEEDSKFMTQ 482
L +HPNI+ L D E ++LYLV EL++ DL I + + S + ++
Sbjct: 83 LNHFHHPNILGLRDIFVHFEEPAMHKLYLVTELMRT-DLAQVIHDQRIVISPQHIQYFMY 141
Query: 483 SLASALSYLHDNYIVHRDIKPENLLVEMSGCHVKVLKVGDFGLAQRVLRPMFTVCGTPT- 541
+ L LH+ +VHRD+ P N+L+ + + + DF LA+ T T
Sbjct: 142 HILLGLHVLHEAGVVHRDLHPGNILLADNND----ITICDFNLARED-----TADANKTH 192
Query: 542 ------YVAPEILNE-SGYGVKIDVWAAGVIL---------------YILLCGFPPFVSD 579
Y APE++ + G+ +D+W+AG ++ Y L V
Sbjct: 193 YVTHRWYRAPELVMQFKGFTKLVDMWSAGCVMAEMFNRKALFRGSTFYNQLNKIVEVVGT 252
Query: 580 TNDQDELF-------DDILSGQYGFPSPYWDDISEEAK----ELISHMLESNPDLRFSAE 628
+D + D + + P+ W + A +LI+ MLE NP R S E
Sbjct: 253 PKIEDVVMFSSPSARDYLRNSLSNVPARAWTAVVPTADPVALDLIAKMLEFNPQRRISTE 312
Query: 629 DVLDHPWLE 637
L HP+ E
Sbjct: 313 QALRHPYFE 321
>pdb|1M7N|A Chain A, Crystal Structure Of Unactivated Apo Insulin-Like Growth
Factor-1 Receptor Kinase Domain
pdb|1M7N|B Chain B, Crystal Structure Of Unactivated Apo Insulin-Like Growth
Factor-1 Receptor Kinase Domain
Length = 322
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 48/229 (20%), Positives = 108/229 (47%), Gaps = 27/229 (11%)
Query: 377 QRYSVGQIIGDGNFAVV-----RQVYDKHKDMDCALKIIDKSKLLGKKQMIENEVNILRS 431
++ ++ + +G G+F +V + V + A+K ++++ + ++ NE ++++
Sbjct: 25 EKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKE 84
Query: 432 VNHPNIIKLLDEYDTNNELYLVIELIKGGDLFDAISKNVKFSEEDSKF-----------M 480
N ++++LL +++EL+ GDL + ++++ E++ M
Sbjct: 85 FNCHHVVRLLGVVSQGQPTLVIMELMTRGDL-KSYLRSLRPEMENNPVLAPPSLSKMIQM 143
Query: 481 TQSLASALSYLHDNYIVHRDIKPENLLVEMSGCHVKVLKVGDFGLAQRVLRPMFTVCGTP 540
+A ++YL+ N VHRD+ N +V +K+GDFG+ + + + G
Sbjct: 144 AGEIADGMAYLNANKFVHRDLAARNCMV----AEDFTVKIGDFGMTRDIYETDYYRKGGK 199
Query: 541 T-----YVAPEILNESGYGVKIDVWAAGVILY-ILLCGFPPFVSDTNDQ 583
+++PE L + + DVW+ GV+L+ I P+ +N+Q
Sbjct: 200 GLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQ 248
>pdb|1JQH|A Chain A, Igf-1 Receptor Kinase Domain
pdb|1JQH|B Chain B, Igf-1 Receptor Kinase Domain
pdb|1JQH|C Chain C, Igf-1 Receptor Kinase Domain
Length = 308
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 48/229 (20%), Positives = 108/229 (47%), Gaps = 27/229 (11%)
Query: 377 QRYSVGQIIGDGNFAVV-----RQVYDKHKDMDCALKIIDKSKLLGKKQMIENEVNILRS 431
++ ++ + +G G+F +V + V + A+K ++++ + ++ NE ++++
Sbjct: 19 EKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKE 78
Query: 432 VNHPNIIKLLDEYDTNNELYLVIELIKGGDLFDAISKNVKFSEEDSKF-----------M 480
N ++++LL +++EL+ GDL + ++++ E++ M
Sbjct: 79 FNCHHVVRLLGVVSQGQPTLVIMELMTRGDL-KSYLRSLRPEMENNPVLAPPSLSKMIQM 137
Query: 481 TQSLASALSYLHDNYIVHRDIKPENLLVEMSGCHVKVLKVGDFGLAQRVLRPMFTVCGTP 540
+A ++YL+ N VHRD+ N +V +K+GDFG+ + + + G
Sbjct: 138 AGEIADGMAYLNANKFVHRDLAARNCMV----AEDFTVKIGDFGMTRDIYETDYYRKGGK 193
Query: 541 T-----YVAPEILNESGYGVKIDVWAAGVILY-ILLCGFPPFVSDTNDQ 583
+++PE L + + DVW+ GV+L+ I P+ +N+Q
Sbjct: 194 GLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQ 242
>pdb|2OJ9|A Chain A, Structure Of Igf-1r Kinase Domain Complexed With A
Benzimidazole Inhibitor
pdb|3NW5|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (11b)
pdb|3NW6|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (11a)
pdb|3NW7|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (34)
Length = 307
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 48/229 (20%), Positives = 108/229 (47%), Gaps = 27/229 (11%)
Query: 377 QRYSVGQIIGDGNFAVV-----RQVYDKHKDMDCALKIIDKSKLLGKKQMIENEVNILRS 431
++ ++ + +G G+F +V + V + A+K ++++ + ++ NE ++++
Sbjct: 18 EKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKE 77
Query: 432 VNHPNIIKLLDEYDTNNELYLVIELIKGGDLFDAISKNVKFSEEDSKF-----------M 480
N ++++LL +++EL+ GDL + ++++ E++ M
Sbjct: 78 FNCHHVVRLLGVVSQGQPTLVIMELMTRGDL-KSYLRSLRPEMENNPVLAPPSLSKMIQM 136
Query: 481 TQSLASALSYLHDNYIVHRDIKPENLLVEMSGCHVKVLKVGDFGLAQRVLRPMFTVCGTP 540
+A ++YL+ N VHRD+ N +V +K+GDFG+ + + + G
Sbjct: 137 AGEIADGMAYLNANKFVHRDLAARNCMV----AEDFTVKIGDFGMTRDIYETDYYRKGGK 192
Query: 541 T-----YVAPEILNESGYGVKIDVWAAGVILY-ILLCGFPPFVSDTNDQ 583
+++PE L + + DVW+ GV+L+ I P+ +N+Q
Sbjct: 193 GLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQ 241
>pdb|3I81|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With Bms-754807
[1-(4-((5-Cyclopropyl-
1h-Pyrazol-3-Yl)amino)pyrrolo[2,1-F][1,2,
4]triazin-2-Yl)-N-
(6-Fluoro-3-Pyridinyl)-2-Methyl-L-Prolinamide]
Length = 315
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 48/229 (20%), Positives = 108/229 (47%), Gaps = 27/229 (11%)
Query: 377 QRYSVGQIIGDGNFAVV-----RQVYDKHKDMDCALKIIDKSKLLGKKQMIENEVNILRS 431
++ ++ + +G G+F +V + V + A+K ++++ + ++ NE ++++
Sbjct: 18 EKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKE 77
Query: 432 VNHPNIIKLLDEYDTNNELYLVIELIKGGDLFDAISKNVKFSEEDSKF-----------M 480
N ++++LL +++EL+ GDL + ++++ E++ M
Sbjct: 78 FNCHHVVRLLGVVSQGQPTLVIMELMTRGDL-KSYLRSLRPEMENNPVLAPPSLSKMIQM 136
Query: 481 TQSLASALSYLHDNYIVHRDIKPENLLVEMSGCHVKVLKVGDFGLAQRVLRPMFTVCGTP 540
+A ++YL+ N VHRD+ N +V +K+GDFG+ + + + G
Sbjct: 137 AGEIADGMAYLNANKFVHRDLAARNCMV----AEDFTVKIGDFGMTRDIYETDYYRKGGK 192
Query: 541 T-----YVAPEILNESGYGVKIDVWAAGVILY-ILLCGFPPFVSDTNDQ 583
+++PE L + + DVW+ GV+L+ I P+ +N+Q
Sbjct: 193 GLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQ 241
>pdb|3LVP|A Chain A, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|B Chain B, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|C Chain C, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|D Chain D, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
Length = 336
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 58/277 (20%), Positives = 128/277 (46%), Gaps = 32/277 (11%)
Query: 377 QRYSVGQIIGDGNFAVV-----RQVYDKHKDMDCALKIIDKSKLLGKKQMIENEVNILRS 431
++ ++ + +G G+F +V + V + A+K ++++ + ++ NE ++++
Sbjct: 47 EKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKE 106
Query: 432 VNHPNIIKLLDEYDTNNELYLVIELIKGGDLFDAISKNVKFSEEDSKF-----------M 480
N ++++LL +++EL+ GDL + ++++ E++ M
Sbjct: 107 FNCHHVVRLLGVVSQGQPTLVIMELMTRGDL-KSYLRSLRPEMENNPVLAPPSLSKMIQM 165
Query: 481 TQSLASALSYLHDNYIVHRDIKPENLLVEMSGCHVKVLKVGDFGLAQRVLRPMFTVCGTP 540
+A ++YL+ N VHRD+ N +V +K+GDFG+ + + + G
Sbjct: 166 AGEIADGMAYLNANKFVHRDLAARNCMV----AEDFTVKIGDFGMTRDIYETDYYRKGGK 221
Query: 541 T-----YVAPEILNESGYGVKIDVWAAGVILY-ILLCGFPPFVSDTNDQDELFDDILSGQ 594
+++PE L + + DVW+ GV+L+ I P+ +N+Q F ++ G
Sbjct: 222 GLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQVLRF--VMEGG 279
Query: 595 YGFPSPYWDDISEEAKELISHMLESNPDLRFSAEDVL 631
P D+ + EL+ + NP +R S +++
Sbjct: 280 L-LDKP--DNCPDMLFELMRMCWQYNPKMRPSFLEII 313
>pdb|1QPD|A Chain A, Structural Analysis Of The Lymphocyte-specific Kinase Lck
In Complex With Non-selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 53/208 (25%), Positives = 99/208 (47%), Gaps = 19/208 (9%)
Query: 425 EVNILRSVNHPNIIKLLDEYDTNNELYLVIELIKGGDLFDAIS--KNVKFSEEDSKFMTQ 482
E N+++ + H +++L T +Y++ E ++ G L D + +K + M
Sbjct: 58 EANLMKQLQHQRLVRLY-AVVTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAA 116
Query: 483 SLASALSYLHDNYIVHRDIKPENLLV-EMSGCHVKVLKVGDFGLAQRVLRPMFTV---CG 538
+A ++++ + +HRD++ N+LV + C K+ DFGLA+ + T
Sbjct: 117 QIAEGMAFIEERNYIHRDLRAANILVSDTLSC-----KIADFGLARLIEDAEXTAREGAK 171
Query: 539 TPT-YVAPEILNESGYGVKIDVWAAGVILY-ILLCGFPPFVSDTNDQDELFDDILSGQYG 596
P + APE +N + +K DVW+ G++L I+ G P+ TN E+ ++ G Y
Sbjct: 172 FPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTN--PEVIQNLERG-YR 228
Query: 597 FPSPYWDDISEEAKELISHMLESNPDLR 624
P D+ EE +L+ + P+ R
Sbjct: 229 MVRP--DNCPEELYQLMRLCWKERPEDR 254
>pdb|3MPM|A Chain A, Lck Complexed With A Pyrazolopyrimidine
Length = 267
Score = 63.5 bits (153), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 63/259 (24%), Positives = 120/259 (46%), Gaps = 28/259 (10%)
Query: 374 KLLQRYSVGQIIGDGNFAVVRQVYDKHKDMDCALKIIDKSKLLGKKQMIENEVNILRSVN 433
KL++R GQ G+ V Y+ H + A+K + + + E N+++ +
Sbjct: 12 KLVERLGAGQF-GE----VWMGYYNGHTKV--AVKSLKQGSM--SPDAFLAEANLMKQLQ 62
Query: 434 HPNIIKLLDEYDTNNELYLVIELIKGGDLFDAIS--KNVKFSEEDSKFMTQSLASALSYL 491
H +++L T +Y++ E ++ G L D + +K + M +A ++++
Sbjct: 63 HQRLVRLY-AVVTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFI 121
Query: 492 HDNYIVHRDIKPENLLV-EMSGCHVKVLKVGDFGLAQRVLRPMFTV---CGTPT-YVAPE 546
+ +HR+++ N+LV + C K+ DFGLA+ + +T P + APE
Sbjct: 122 EERNYIHRNLRAANILVSDTLSC-----KIADFGLARLIEDNEYTAREGAKFPIKWTAPE 176
Query: 547 ILNESGYGVKIDVWAAGVILY-ILLCGFPPFVSDTNDQDELFDDILSGQYGFPSPYWDDI 605
+N + +K DVW+ G++L I+ G P+ TN E+ ++ G Y P D+
Sbjct: 177 AINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTN--PEVIQNLERG-YRMVRP--DNC 231
Query: 606 SEEAKELISHMLESNPDLR 624
EE +L+ + P+ R
Sbjct: 232 PEELYQLMRLCWKERPEDR 250
>pdb|3LCK|A Chain A, The Kinase Domain Of Human Lymphocyte Kinase (Lck),
Activated Form (Auto-Phosphorylated On Tyr394)
pdb|3BYO|A Chain A, X-Ray Co-Crystal Structure Of 2-Amino-6-Phenylpyrimido[5',
4':5,6]pyrimido[1,2-A]benzimidazol-5(6h)-One 25 Bound To
Lck
Length = 271
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 64/259 (24%), Positives = 119/259 (45%), Gaps = 28/259 (10%)
Query: 374 KLLQRYSVGQIIGDGNFAVVRQVYDKHKDMDCALKIIDKSKLLGKKQMIENEVNILRSVN 433
KL++R GQ G+ V Y+ H + A+K + + + E N+++ +
Sbjct: 16 KLVERLGAGQF-GE----VWMGYYNGHTKV--AVKSLKQGSM--SPDAFLAEANLMKQLQ 66
Query: 434 HPNIIKLLDEYDTNNELYLVIELIKGGDLFDAIS--KNVKFSEEDSKFMTQSLASALSYL 491
H +++L T +Y++ E ++ G L D + +K + M +A ++++
Sbjct: 67 HQRLVRLY-AVVTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFI 125
Query: 492 HDNYIVHRDIKPENLLV-EMSGCHVKVLKVGDFGLAQRVLRPMFTV---CGTPT-YVAPE 546
+ +HRD++ N+LV + C K+ DFGLA+ + T P + APE
Sbjct: 126 EERNYIHRDLRAANILVSDTLSC-----KIADFGLARLIEDNEXTAREGAKFPIKWTAPE 180
Query: 547 ILNESGYGVKIDVWAAGVILY-ILLCGFPPFVSDTNDQDELFDDILSGQYGFPSPYWDDI 605
+N + +K DVW+ G++L I+ G P+ TN E+ ++ G Y P D+
Sbjct: 181 AINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTN--PEVIQNLERG-YRMVRP--DNC 235
Query: 606 SEEAKELISHMLESNPDLR 624
EE +L+ + P+ R
Sbjct: 236 PEELYQLMRLCWKERPEDR 254
>pdb|3BYM|A Chain A, X-Ray Co-Crystal Structure Aminobenzimidazole Triazine 1
Bound To Lck
Length = 272
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 64/259 (24%), Positives = 119/259 (45%), Gaps = 28/259 (10%)
Query: 374 KLLQRYSVGQIIGDGNFAVVRQVYDKHKDMDCALKIIDKSKLLGKKQMIENEVNILRSVN 433
KL++R GQ G+ V Y+ H + A+K + + + E N+++ +
Sbjct: 17 KLVERLGAGQF-GE----VWMGYYNGHTKV--AVKSLKQGSM--SPDAFLAEANLMKQLQ 67
Query: 434 HPNIIKLLDEYDTNNELYLVIELIKGGDLFDAIS--KNVKFSEEDSKFMTQSLASALSYL 491
H +++L T +Y++ E ++ G L D + +K + M +A ++++
Sbjct: 68 HQRLVRLY-AVVTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFI 126
Query: 492 HDNYIVHRDIKPENLLV-EMSGCHVKVLKVGDFGLAQRVLRPMFTV---CGTPT-YVAPE 546
+ +HRD++ N+LV + C K+ DFGLA+ + T P + APE
Sbjct: 127 EERNYIHRDLRAANILVSDTLSC-----KIADFGLARLIEDNEXTAREGAKFPIKWTAPE 181
Query: 547 ILNESGYGVKIDVWAAGVILY-ILLCGFPPFVSDTNDQDELFDDILSGQYGFPSPYWDDI 605
+N + +K DVW+ G++L I+ G P+ TN E+ ++ G Y P D+
Sbjct: 182 AINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTN--PEVIQNLERG-YRMVRP--DNC 236
Query: 606 SEEAKELISHMLESNPDLR 624
EE +L+ + P+ R
Sbjct: 237 PEELYQLMRLCWKERPEDR 255
>pdb|3TL8|A Chain A, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|D Chain D, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|G Chain G, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|H Chain H, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
Length = 349
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 64/231 (27%), Positives = 103/231 (44%), Gaps = 24/231 (10%)
Query: 379 YSVGQIIGDGNFAVVRQVYDKHKDMD---CALKIIDKSKLLGKKQMIENEVNILRSVNHP 435
+S I+G G F +VY K + D A+K + + + G + + EV ++ H
Sbjct: 40 FSNKNILGRGGFG---KVY-KGRLADGTLVAVKRLKEERXQGGELQFQTEVEMISMAVHR 95
Query: 436 NIIKLLDEYDTNNELYLVIELIKGGDLFDAISKNVK----FSEEDSKFMTQSLASALSYL 491
N+++L T E LV + G + + + + + + A L+YL
Sbjct: 96 NLLRLRGFCMTPTERLLVYPYMANGSVASCLRERPESQPPLDWPKRQRIALGSARGLAYL 155
Query: 492 HDN---YIVHRDIKPENLLVEMSGCHVKVLKVGDFGLAQ----RVLRPMFTVCGTPTYVA 544
HD+ I+HRD+K N+L++ V VGDFGLA+ + V GT ++A
Sbjct: 156 HDHCDPKIIHRDVKAANILLDEEFEAV----VGDFGLAKLMDYKDXHVXXAVRGTIGHIA 211
Query: 545 PEILNESGYGVKIDVWAAGVILYILLCGFPPF--VSDTNDQDELFDDILSG 593
PE L+ K DV+ GV+L L+ G F ND D + D + G
Sbjct: 212 PEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLDWVKG 262
>pdb|3KXZ|A Chain A, The Complex Crystal Structure Of Lck With A Probe Molecule
W259
Length = 287
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 64/259 (24%), Positives = 119/259 (45%), Gaps = 28/259 (10%)
Query: 374 KLLQRYSVGQIIGDGNFAVVRQVYDKHKDMDCALKIIDKSKLLGKKQMIENEVNILRSVN 433
KL++R GQ G+ V Y+ H + A+K + + + E N+++ +
Sbjct: 24 KLVERLGAGQF-GE----VWMGYYNGHTKV--AVKSLKQGSM--SPDAFLAEANLMKQLQ 74
Query: 434 HPNIIKLLDEYDTNNELYLVIELIKGGDLFDAIS--KNVKFSEEDSKFMTQSLASALSYL 491
H +++L T +Y++ E ++ G L D + +K + M +A ++++
Sbjct: 75 HQRLVRLY-AVVTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFI 133
Query: 492 HDNYIVHRDIKPENLLV-EMSGCHVKVLKVGDFGLAQRVLRPMFTV---CGTPT-YVAPE 546
+ +HRD++ N+LV + C K+ DFGLA+ + T P + APE
Sbjct: 134 EERNYIHRDLRAANILVSDTLSC-----KIADFGLARLIEDNEXTAREGAKFPIKWTAPE 188
Query: 547 ILNESGYGVKIDVWAAGVILY-ILLCGFPPFVSDTNDQDELFDDILSGQYGFPSPYWDDI 605
+N + +K DVW+ G++L I+ G P+ TN E+ ++ G Y P D+
Sbjct: 189 AINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTN--PEVIQNLERG-YRMVRP--DNC 243
Query: 606 SEEAKELISHMLESNPDLR 624
EE +L+ + P+ R
Sbjct: 244 PEELYQLMRLCWKERPEDR 262
>pdb|1QPE|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
pdb|1QPJ|A Chain A, Crystal Structure Of The Lymphocyte-Specific Kinase Lck In
Complex With Staurosporine.
pdb|1QPC|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 64/259 (24%), Positives = 119/259 (45%), Gaps = 28/259 (10%)
Query: 374 KLLQRYSVGQIIGDGNFAVVRQVYDKHKDMDCALKIIDKSKLLGKKQMIENEVNILRSVN 433
KL++R GQ G+ V Y+ H + A+K + + + E N+++ +
Sbjct: 16 KLVERLGAGQF-GE----VWMGYYNGHTKV--AVKSLKQGSM--SPDAFLAEANLMKQLQ 66
Query: 434 HPNIIKLLDEYDTNNELYLVIELIKGGDLFDAIS--KNVKFSEEDSKFMTQSLASALSYL 491
H +++L T +Y++ E ++ G L D + +K + M +A ++++
Sbjct: 67 HQRLVRLY-AVVTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFI 125
Query: 492 HDNYIVHRDIKPENLLV-EMSGCHVKVLKVGDFGLAQRVLRPMFTV---CGTPT-YVAPE 546
+ +HRD++ N+LV + C K+ DFGLA+ + T P + APE
Sbjct: 126 EERNYIHRDLRAANILVSDTLSC-----KIADFGLARLIEDNEXTAREGAKFPIKWTAPE 180
Query: 547 ILNESGYGVKIDVWAAGVILY-ILLCGFPPFVSDTNDQDELFDDILSGQYGFPSPYWDDI 605
+N + +K DVW+ G++L I+ G P+ TN E+ ++ G Y P D+
Sbjct: 181 AINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTN--PEVIQNLERG-YRMVRP--DNC 235
Query: 606 SEEAKELISHMLESNPDLR 624
EE +L+ + P+ R
Sbjct: 236 PEELYQLMRLCWKERPEDR 254
>pdb|2I0V|A Chain A, C-Fms Tyrosine Kinase In Complex With A Quinolone
Inhibitor
pdb|2I0Y|A Chain A, Cfms Tyrosine Kinase (Fgf Kid) In Complex With An
Arylamide Inhibitor
pdb|3DPK|A Chain A, Cfms Tyrosine Kinase In Complex With A Pyridopyrimidinone
Inhibitor
pdb|3KRJ|A Chain A, Cfms Tyrosine Kinase In Complex With
4-Cyano-1h-Imidazole-2-Carboxylic Acid
(2-Cyclohex-1-Enyl-4-Piperidin-4-Yl-Phenyl)-Amide
pdb|3KRL|A Chain A, Cfms Tyrosine Kinase In Complex With
5-Cyano-Furan-2-Carboxylic Acid
[4-(4-Methyl-Piperazin-1-Yl)-2-Piperidin-1-Yl-Phenyl]-
Amide
Length = 335
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 57/238 (23%), Positives = 107/238 (44%), Gaps = 35/238 (14%)
Query: 367 ENLNIPSKLLQRYSVGQIIGDGNFAVVRQV--YDKHKD---MDCALKIIDKSKLLGKKQM 421
E P LQ G+ +G G F V + + K+ + A+K++ + +K+
Sbjct: 39 EKWEFPRNNLQ---FGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEA 95
Query: 422 IENEVNILRSVN-HPNIIKLLDEYDTNNELYLVIELIKGGDLFDAISKNV---------- 470
+ +E+ I+ + H NI+ LL + ++ E GDL + + +
Sbjct: 96 LMSELKIMSHLGQHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKRPPGLEYSYNP 155
Query: 471 ------KFSEEDSKFMTQSLASALSYLHDNYIVHRDIKPENLLVEMSGCHVKVLKVGDFG 524
+ S D + +A +++L +HRD+ N+L ++ HV K+GDFG
Sbjct: 156 SHNPEEQLSSRDLLHFSSQVAQGMAFLASKNCIHRDVAARNVL--LTNGHVA--KIGDFG 211
Query: 525 LAQRVLR-PMFTVCGTP----TYVAPEILNESGYGVKIDVWAAGVILY-ILLCGFPPF 576
LA+ ++ + V G ++APE + + Y V+ DVW+ G++L+ I G P+
Sbjct: 212 LARDIMNDSNYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFSLGLNPY 269
>pdb|1K3A|A Chain A, Structure Of The Insulin-Like Growth Factor 1 Receptor
Kinase
Length = 299
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 58/277 (20%), Positives = 127/277 (45%), Gaps = 32/277 (11%)
Query: 377 QRYSVGQIIGDGNFAVV-----RQVYDKHKDMDCALKIIDKSKLLGKKQMIENEVNILRS 431
++ ++ + +G G+F +V + V + A+K ++++ + ++ NE ++++
Sbjct: 10 EKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKE 69
Query: 432 VNHPNIIKLLDEYDTNNELYLVIELIKGGDLFDAISKNVKFSEEDSKF-----------M 480
N ++++LL +++EL+ GDL + ++++ E++ M
Sbjct: 70 FNCHHVVRLLGVVSQGQPTLVIMELMTRGDL-KSYLRSLRPEMENNPVLAPPSLSKMIQM 128
Query: 481 TQSLASALSYLHDNYIVHRDIKPENLLVEMSGCHVKVLKVGDFGLAQRVLRPMFTVCGTP 540
+A ++YL+ N VHRD+ N +V +K+GDFG+ + + G
Sbjct: 129 AGEIADGMAYLNANKFVHRDLAARNCMV----AEDFTVKIGDFGMTRDIXETDXXRKGGK 184
Query: 541 T-----YVAPEILNESGYGVKIDVWAAGVILY-ILLCGFPPFVSDTNDQDELFDDILSGQ 594
+++PE L + + DVW+ GV+L+ I P+ +N+Q F ++ G
Sbjct: 185 GLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQVLRF--VMEGG 242
Query: 595 YGFPSPYWDDISEEAKELISHMLESNPDLRFSAEDVL 631
P D+ + EL+ + NP +R S +++
Sbjct: 243 L-LDKP--DNCPDMLLELMRMCWQYNPKMRPSFLEII 276
>pdb|2OFU|A Chain A, X-Ray Crystal Structure Of 2-Aminopyrimidine Carbamate 43
Bound To Lck
Length = 273
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 64/259 (24%), Positives = 119/259 (45%), Gaps = 28/259 (10%)
Query: 374 KLLQRYSVGQIIGDGNFAVVRQVYDKHKDMDCALKIIDKSKLLGKKQMIENEVNILRSVN 433
KL++R GQ G+ V Y+ H + A+K + + + E N+++ +
Sbjct: 18 KLVERLGAGQF-GE----VWMGYYNGHTKV--AVKSLKQGSM--SPDAFLAEANLMKQLQ 68
Query: 434 HPNIIKLLDEYDTNNELYLVIELIKGGDLFDAIS--KNVKFSEEDSKFMTQSLASALSYL 491
H +++L T +Y++ E ++ G L D + +K + M +A ++++
Sbjct: 69 HQRLVRLY-AVVTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFI 127
Query: 492 HDNYIVHRDIKPENLLV-EMSGCHVKVLKVGDFGLAQRVLRPMFTV---CGTPT-YVAPE 546
+ +HRD++ N+LV + C K+ DFGLA+ + T P + APE
Sbjct: 128 EERNYIHRDLRAANILVSDTLSC-----KIADFGLARLIEDNEXTAREGAKFPIKWTAPE 182
Query: 547 ILNESGYGVKIDVWAAGVILY-ILLCGFPPFVSDTNDQDELFDDILSGQYGFPSPYWDDI 605
+N + +K DVW+ G++L I+ G P+ TN E+ ++ G Y P D+
Sbjct: 183 AINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTN--PEVIQNLERG-YRMVRP--DNC 237
Query: 606 SEEAKELISHMLESNPDLR 624
EE +L+ + P+ R
Sbjct: 238 PEELYQLMRLCWKERPEDR 256
>pdb|3KMM|A Chain A, Structure Of Human Lck Kinase With A Small Molecule
Inhibitor
Length = 288
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 64/259 (24%), Positives = 119/259 (45%), Gaps = 28/259 (10%)
Query: 374 KLLQRYSVGQIIGDGNFAVVRQVYDKHKDMDCALKIIDKSKLLGKKQMIENEVNILRSVN 433
KL++R GQ G+ V Y+ H + A+K + + + E N+++ +
Sbjct: 25 KLVERLGAGQF-GE----VWMGYYNGHTKV--AVKSLKQGSM--SPDAFLAEANLMKQLQ 75
Query: 434 HPNIIKLLDEYDTNNELYLVIELIKGGDLFDAIS--KNVKFSEEDSKFMTQSLASALSYL 491
H +++L T +Y++ E ++ G L D + +K + M +A ++++
Sbjct: 76 HQRLVRLY-AVVTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFI 134
Query: 492 HDNYIVHRDIKPENLLV-EMSGCHVKVLKVGDFGLAQRVLRPMFTV---CGTPT-YVAPE 546
+ +HRD++ N+LV + C K+ DFGLA+ + T P + APE
Sbjct: 135 EERNYIHRDLRAANILVSDTLSC-----KIADFGLARLIEDNEXTAREGAKFPIKWTAPE 189
Query: 547 ILNESGYGVKIDVWAAGVILY-ILLCGFPPFVSDTNDQDELFDDILSGQYGFPSPYWDDI 605
+N + +K DVW+ G++L I+ G P+ TN E+ ++ G Y P D+
Sbjct: 190 AINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTN--PEVIQNLERG-YRMVRP--DNC 244
Query: 606 SEEAKELISHMLESNPDLR 624
EE +L+ + P+ R
Sbjct: 245 PEELYQLMRLCWKERPEDR 263
>pdb|2ZM1|A Chain A, Crystal Structure Of Imidazo Pyrazin 1 Bound To The Kinase
Domain Of Human Lck, (Auto-Phosphorylated On Tyr394)
pdb|2ZM4|A Chain A, Crystal Structure Of Imidazo Quinoxaline 1 Bound To The
Kinase Domain Of Human Lck, Activated Form (Auto-
Phosphorylated On Tyr394)
pdb|2ZYB|A Chain A, Crystal Structure Of Phenylimidazo Pyrazin 2 Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC1|A Chain A, Crystal Structure Of Pyrazin Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC2|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC3|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC4|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC5|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC8|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACJ|A Chain A, Crystal Structure Of Imidazo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACK|A Chain A, Crystal Structure Of Pyrrolo Pyrazine Derivative Bound To
The Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD4|A Chain A, Crystal Structure Of Methoxy Benzofuran Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AD5|A Chain A, Crystal Structure Of Triazolone Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD6|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
Length = 285
Score = 63.2 bits (152), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 64/259 (24%), Positives = 119/259 (45%), Gaps = 28/259 (10%)
Query: 374 KLLQRYSVGQIIGDGNFAVVRQVYDKHKDMDCALKIIDKSKLLGKKQMIENEVNILRSVN 433
KL++R GQ G+ V Y+ H + A+K + + + E N+++ +
Sbjct: 22 KLVERLGAGQF-GE----VWMGYYNGHTKV--AVKSLKQGSM--SPDAFLAEANLMKQLQ 72
Query: 434 HPNIIKLLDEYDTNNELYLVIELIKGGDLFDAIS--KNVKFSEEDSKFMTQSLASALSYL 491
H +++L T +Y++ E ++ G L D + +K + M +A ++++
Sbjct: 73 HQRLVRLY-AVVTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFI 131
Query: 492 HDNYIVHRDIKPENLLV-EMSGCHVKVLKVGDFGLAQRVLRPMFTV---CGTPT-YVAPE 546
+ +HRD++ N+LV + C K+ DFGLA+ + T P + APE
Sbjct: 132 EERNYIHRDLRAANILVSDTLSC-----KIADFGLARLIEDNEXTAREGAKFPIKWTAPE 186
Query: 547 ILNESGYGVKIDVWAAGVILY-ILLCGFPPFVSDTNDQDELFDDILSGQYGFPSPYWDDI 605
+N + +K DVW+ G++L I+ G P+ TN E+ ++ G Y P D+
Sbjct: 187 AINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTN--PEVIQNLERG-YRMVRP--DNC 241
Query: 606 SEEAKELISHMLESNPDLR 624
EE +L+ + P+ R
Sbjct: 242 PEELYQLMRLCWKERPEDR 260
>pdb|3D94|A Chain A, Crystal Structure Of The Insulin-Like Growth Factor-1
Receptor Kinase In Complex With Pqip
Length = 301
Score = 63.2 bits (152), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 59/280 (21%), Positives = 128/280 (45%), Gaps = 38/280 (13%)
Query: 377 QRYSVGQIIGDGNFAVV-----RQVYDKHKDMDCALKIIDKSKLLGKKQMIENEVNILRS 431
++ ++ + +G G+F +V + V + A+K ++++ + ++ NE ++++
Sbjct: 12 EKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKE 71
Query: 432 VNHPNIIKLLDEYDTNNELYLVIELIKGGDLFDAISKNVKFSEEDSKF-----------M 480
N ++++LL +++EL+ GDL + ++++ E++ M
Sbjct: 72 FNCHHVVRLLGVVSQGQPTLVIMELMTRGDL-KSYLRSLRPEMENNPVLAPPSLSKMIQM 130
Query: 481 TQSLASALSYLHDNYIVHRDIKPENLLVEMSGCHVK---VLKVGDFGLAQRVLRPMFTVC 537
+A ++YL+ N VHRD+ N C V +K+GDFG+ + + +
Sbjct: 131 AGEIADGMAYLNANKFVHRDLAARN-------CXVAEDFTVKIGDFGMTRDIYETDYYRK 183
Query: 538 GTPT-----YVAPEILNESGYGVKIDVWAAGVILY-ILLCGFPPFVSDTNDQDELFDDIL 591
G +++PE L + + DVW+ GV+L+ I P+ +N+Q F ++
Sbjct: 184 GGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQVLRF--VM 241
Query: 592 SGQYGFPSPYWDDISEEAKELISHMLESNPDLRFSAEDVL 631
G P D+ + EL+ + NP +R S +++
Sbjct: 242 EGGL-LDKP--DNCPDMLLELMRMCWQYNPKMRPSFLEII 278
>pdb|2ZM3|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|B Chain B, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|C Chain C, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|D Chain D, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|3F5P|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|B Chain B, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|C Chain C, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|D Chain D, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|E Chain E, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|F Chain F, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|G Chain G, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|H Chain H, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|I Chain I, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|J Chain J, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|K Chain K, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|M Chain M, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|L Chain L, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|R Chain R, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|S Chain S, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|T Chain T, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
Length = 308
Score = 63.2 bits (152), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 48/229 (20%), Positives = 107/229 (46%), Gaps = 27/229 (11%)
Query: 377 QRYSVGQIIGDGNFAVV-----RQVYDKHKDMDCALKIIDKSKLLGKKQMIENEVNILRS 431
++ ++ + +G G+F +V + V + A+K ++++ + ++ NE ++++
Sbjct: 19 EKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKE 78
Query: 432 VNHPNIIKLLDEYDTNNELYLVIELIKGGDLFDAISKNVKFSEEDSKF-----------M 480
N ++++LL +++EL+ GDL + ++++ E++ M
Sbjct: 79 FNCHHVVRLLGVVSQGQPTLVIMELMTRGDL-KSYLRSLRPEMENNPVLAPPSLSKMIQM 137
Query: 481 TQSLASALSYLHDNYIVHRDIKPENLLVEMSGCHVKVLKVGDFGLAQRVLRPMFTVCGTP 540
+A ++YL+ N VHRD+ N +V +K+GDFG+ + + G
Sbjct: 138 AGEIADGMAYLNANKFVHRDLAARNCMV----AEDFTVKIGDFGMTRDIXETDXXRKGGK 193
Query: 541 T-----YVAPEILNESGYGVKIDVWAAGVILY-ILLCGFPPFVSDTNDQ 583
+++PE L + + DVW+ GV+L+ I P+ +N+Q
Sbjct: 194 GLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQ 242
>pdb|1MQB|A Chain A, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
pdb|1MQB|B Chain B, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
Length = 333
Score = 62.8 bits (151), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 60/231 (25%), Positives = 106/231 (45%), Gaps = 21/231 (9%)
Query: 383 QIIGDGNFAVVRQVYDK----HKDMDCALKIIDKSKLLGKKQMIENEVNILRSVNHPNII 438
++IG G F V + K K++ A+K + ++ E I+ +H NII
Sbjct: 50 KVIGAGEFGEVYKGMLKTSSGKKEVPVAIKTLKAGYTEKQRVDFLGEAGIMGQFSHHNII 109
Query: 439 KLLDEYDTNNELYLVIELIKGGDLFDAI-SKNVKFSEEDSKFMTQSLASALSYLHDNYIV 497
+L + ++ E ++ G L + K+ +FS M + +A+ + YL + V
Sbjct: 110 RLEGVISKYKPMMIITEYMENGALDKFLREKDGEFSVLQLVGMLRGIAAGMKYLANMNYV 169
Query: 498 HRDIKPENLLVEMSGCHVKVLKVGDFGLAQRVL----RPMFTVCGTPT---YVAPEILNE 550
HRD+ N+LV + V KV DFGL+ RVL +T G + APE ++
Sbjct: 170 HRDLAARNILVNSN----LVCKVSDFGLS-RVLEDDPEATYTTSGGKIPIRWTAPEAISY 224
Query: 551 SGYGVKIDVWAAGVILY-ILLCGFPPFVSDTNDQDELFDDILSGQYGFPSP 600
+ DVW+ G++++ ++ G P+ +N E+ I G + P+P
Sbjct: 225 RKFTSASDVWSFGIVMWEVMTYGERPYWELSN--HEVMKAINDG-FRLPTP 272
>pdb|3FME|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 6 (Mek6) Activated Mutant (S207d, T211d)
Length = 290
Score = 62.4 bits (150), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 63/263 (23%), Positives = 119/263 (45%), Gaps = 18/263 (6%)
Query: 385 IGDGNFAVVRQVYDKHKDMDCALKIIDKSKLLGKKQMIENEVNI-LRSVNHPNIIKLLDE 443
+G G + VV ++ A+K I + +++ + +++I +R+V+ P +
Sbjct: 15 LGRGAYGVVEKMRHVPSGQIMAVKRIRATVNSQEQKRLLMDLDISMRTVDCPFTVTFYGA 74
Query: 444 YDTNNELYLVIELIKGG-DLF--DAISKNVKFSEEDSKFMTQSLASALSYLHDNY-IVHR 499
++++ +EL+ D F I K E+ + S+ AL +LH ++HR
Sbjct: 75 LFREGDVWICMELMDTSLDKFYKQVIDKGQTIPEDILGKIAVSIVKALEHLHSKLSVIHR 134
Query: 500 DIKPENLLVEMSGCHVKVLKVGDFGLAQRVLRPMF--TVCGTPTYVAPEI----LNESGY 553
D+KP N+L+ G +K+ DFG++ ++ + G Y+APE LN+ GY
Sbjct: 135 DVKPSNVLINALG----QVKMCDFGISGYLVDDVAKDIDAGCKPYMAPERINPELNQKGY 190
Query: 554 GVKIDVWAAGVILYILLCGFPPFVSDTNDQDELFDDILSGQYGFPSPYWDDISEEAKELI 613
VK D+W+ G+ + L P+ S +L + P+ D S E +
Sbjct: 191 SVKSDIWSLGITMIELAILRFPYDSWGTPFQQLKQVVEEPSPQLPA---DKFSAEFVDFT 247
Query: 614 SHMLESNPDLRFSAEDVLDHPWL 636
S L+ N R + +++ HP+
Sbjct: 248 SQCLKKNSKERPTYPELMQHPFF 270
>pdb|1U54|A Chain A, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 62.4 bits (150), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 60/214 (28%), Positives = 101/214 (47%), Gaps = 22/214 (10%)
Query: 385 IGDGNFAVVRQV-YD--KHKDMDCALKIIDKSKLLGKKQMIEN---EVNILRSVNHPNII 438
+GDG+F VVR+ +D K + A+K + K +L + + +++ EVN + S++H N+I
Sbjct: 26 LGDGSFGVVRRGEWDAPSGKTVSVAVKCL-KPDVLSQPEAMDDFIREVNAMHSLDHRNLI 84
Query: 439 KLLDEYDTNNELYLVIELIKGGDLFDAISKNVK--FSEEDSKFMTQSLASALSYLHDNYI 496
+L T + +V EL G L D + K+ S++ Q +A + YL
Sbjct: 85 RLYGVVLTP-PMKMVTELAPLGSLLDRLRKHQGHFLLGTLSRYAVQ-VAEGMGYLESKRF 142
Query: 497 VHRDIKPENLLVEMSGCHVKVLKVGDFGLAQRVLR-----PMFTVCGTP-TYVAPEILNE 550
+HRD+ NLL+ ++K+GDFGL + + + M P + APE L
Sbjct: 143 IHRDLAARNLLLATR----DLVKIGDFGLMRALPQNDDHXVMQEHRKVPFAWCAPESLKT 198
Query: 551 SGYGVKIDVWAAGVILYILLC-GFPPFVSDTNDQ 583
+ D W GV L+ + G P++ Q
Sbjct: 199 RTFSHASDTWMFGVTLWEMFTYGQEPWIGLNGSQ 232
>pdb|4HZS|A Chain A, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|B Chain B, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|C Chain C, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|D Chain D, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
Length = 341
Score = 62.4 bits (150), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 60/214 (28%), Positives = 101/214 (47%), Gaps = 22/214 (10%)
Query: 385 IGDGNFAVVRQ-VYD--KHKDMDCALKIIDKSKLLGKKQMIEN---EVNILRSVNHPNII 438
+GDG+F VVR+ +D K + A+K + K +L + + +++ EVN + S++H N+I
Sbjct: 20 LGDGSFGVVRRGEWDAPSGKTVSVAVKCL-KPDVLSQPEAMDDFIREVNAMHSLDHRNLI 78
Query: 439 KLLDEYDTNNELYLVIELIKGGDLFDAISKNVK--FSEEDSKFMTQSLASALSYLHDNYI 496
+L T + +V EL G L D + K+ S++ Q +A + YL
Sbjct: 79 RLYGVVLTP-PMKMVTELAPLGSLLDRLRKHQGHFLLGTLSRYAVQ-VAEGMGYLESKRF 136
Query: 497 VHRDIKPENLLVEMSGCHVKVLKVGDFGLAQRVLRP-----MFTVCGTP-TYVAPEILNE 550
+HRD+ NLL+ ++K+GDFGL + + + M P + APE L
Sbjct: 137 IHRDLAARNLLLATR----DLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAPESLKT 192
Query: 551 SGYGVKIDVWAAGVILYILLC-GFPPFVSDTNDQ 583
+ D W GV L+ + G P++ Q
Sbjct: 193 RTFSHASDTWMFGVTLWEMFTYGQEPWIGLNGSQ 226
>pdb|1U46|A Chain A, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U46|B Chain B, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U4D|A Chain A, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U4D|B Chain B, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U54|B Chain B, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 62.0 bits (149), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 60/214 (28%), Positives = 101/214 (47%), Gaps = 22/214 (10%)
Query: 385 IGDGNFAVVRQV-YD--KHKDMDCALKIIDKSKLLGKKQMIEN---EVNILRSVNHPNII 438
+GDG+F VVR+ +D K + A+K + K +L + + +++ EVN + S++H N+I
Sbjct: 26 LGDGSFGVVRRGEWDAPSGKTVSVAVKCL-KPDVLSQPEAMDDFIREVNAMHSLDHRNLI 84
Query: 439 KLLDEYDTNNELYLVIELIKGGDLFDAISKNVK--FSEEDSKFMTQSLASALSYLHDNYI 496
+L T + +V EL G L D + K+ S++ Q +A + YL
Sbjct: 85 RLYGVVLTP-PMKMVTELAPLGSLLDRLRKHQGHFLLGTLSRYAVQ-VAEGMGYLESKRF 142
Query: 497 VHRDIKPENLLVEMSGCHVKVLKVGDFGLAQRVLR-----PMFTVCGTP-TYVAPEILNE 550
+HRD+ NLL+ ++K+GDFGL + + + M P + APE L
Sbjct: 143 IHRDLAARNLLLATR----DLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAPESLKT 198
Query: 551 SGYGVKIDVWAAGVILYILLC-GFPPFVSDTNDQ 583
+ D W GV L+ + G P++ Q
Sbjct: 199 RTFSHASDTWMFGVTLWEMFTYGQEPWIGLNGSQ 232
>pdb|4EWH|B Chain B, Co-Crystal Structure Of Ack1 With Inhibitor
pdb|4EWH|A Chain A, Co-Crystal Structure Of Ack1 With Inhibitor
Length = 275
Score = 62.0 bits (149), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 60/214 (28%), Positives = 101/214 (47%), Gaps = 22/214 (10%)
Query: 385 IGDGNFAVVRQ-VYD--KHKDMDCALKIIDKSKLLGKKQMIEN---EVNILRSVNHPNII 438
+GDG+F VVR+ +D K + A+K + K +L + + +++ EVN + S++H N+I
Sbjct: 16 LGDGSFGVVRRGEWDAPSGKTVSVAVKCL-KPDVLSQPEAMDDFIREVNAMHSLDHRNLI 74
Query: 439 KLLDEYDTNNELYLVIELIKGGDLFDAISKNVK--FSEEDSKFMTQSLASALSYLHDNYI 496
+L T + +V EL G L D + K+ S++ Q +A + YL
Sbjct: 75 RLYGVVLTP-PMKMVTELAPLGSLLDRLRKHQGHFLLGTLSRYAVQ-VAEGMGYLESKRF 132
Query: 497 VHRDIKPENLLVEMSGCHVKVLKVGDFGLAQRVLR-----PMFTVCGTP-TYVAPEILNE 550
+HRD+ NLL+ ++K+GDFGL + + + M P + APE L
Sbjct: 133 IHRDLAARNLLLATR----DLVKIGDFGLMRALPQNDDHXVMQEHRKVPFAWCAPESLKT 188
Query: 551 SGYGVKIDVWAAGVILYILLC-GFPPFVSDTNDQ 583
+ D W GV L+ + G P++ Q
Sbjct: 189 RTFSHASDTWMFGVTLWEMFTYGQEPWIGLNGSQ 222
>pdb|4HZR|A Chain A, Crystal Structure Of Ack1 Kinase Domain
pdb|4HZR|B Chain B, Crystal Structure Of Ack1 Kinase Domain
Length = 277
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 60/214 (28%), Positives = 101/214 (47%), Gaps = 22/214 (10%)
Query: 385 IGDGNFAVVRQ-VYD--KHKDMDCALKIIDKSKLLGKKQMIEN---EVNILRSVNHPNII 438
+GDG+F VVR+ +D K + A+K + K +L + + +++ EVN + S++H N+I
Sbjct: 20 LGDGSFGVVRRGEWDAPSGKTVSVAVKCL-KPDVLSQPEAMDDFIREVNAMHSLDHRNLI 78
Query: 439 KLLDEYDTNNELYLVIELIKGGDLFDAISKNVK--FSEEDSKFMTQSLASALSYLHDNYI 496
+L T + +V EL G L D + K+ S++ Q +A + YL
Sbjct: 79 RLYGVVLTP-PMKMVTELAPLGSLLDRLRKHQGHFLLGTLSRYAVQ-VAEGMGYLESKRF 136
Query: 497 VHRDIKPENLLVEMSGCHVKVLKVGDFGLAQRVLR-----PMFTVCGTP-TYVAPEILNE 550
+HRD+ NLL+ ++K+GDFGL + + + M P + APE L
Sbjct: 137 IHRDLAARNLLLATR----DLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAPESLKT 192
Query: 551 SGYGVKIDVWAAGVILYILLC-GFPPFVSDTNDQ 583
+ D W GV L+ + G P++ Q
Sbjct: 193 RTFSHASDTWMFGVTLWEMFTYGQEPWIGLNGSQ 226
>pdb|4AW5|A Chain A, Complex Of The Ephb4 Kinase Domain With An Oxindole
Inhibitor
Length = 291
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 60/234 (25%), Positives = 107/234 (45%), Gaps = 22/234 (9%)
Query: 381 VGQIIGDGNFAVV---RQVYDKHKDMDCALKIIDKSKLLGKKQMIENEVNILRSVNHPNI 437
+ ++IG G F V R K+ A+K + +++ +E +I+ HPNI
Sbjct: 18 IEEVIGAGEFGEVCRGRLKAPGKKESCVAIKTLKGGYTERQRREFLSEASIMGQFEHPNI 77
Query: 438 IKLLDEYDTNNELYLVIELIKGGDLFDAISKN-VKFSEEDSKFMTQSLASALSYLHDNYI 496
I+L + + ++ E ++ G L + N +F+ M + +AS + YL +
Sbjct: 78 IRLEGVVTNSMPVMILTEFMENGALDSFLRLNDGQFTVIQLVGMLRGIASGMRYLAEMSY 137
Query: 497 VHRDIKPENLLVEMSGCHVKVLKVGDFGLAQRVLR-----PMFTVC---GTPT-YVAPEI 547
VHRD+ N+LV + V KV DFGL+ R L P +T P + APE
Sbjct: 138 VHRDLAARNILVNSN----LVCKVSDFGLS-RFLEENSSDPTYTSSLGGKIPIRWTAPEA 192
Query: 548 LNESGYGVKIDVWAAGVILY-ILLCGFPPFVSDTNDQDELFDDILSGQYGFPSP 600
+ + D W+ G++++ ++ G P+ D ++QD + + + Y P P
Sbjct: 193 IAFRKFTSASDAWSYGIVMWEVMSFGERPYW-DMSNQDVI--NAIEQDYRLPPP 243
>pdb|3EQP|B Chain B, Crystal Structure Of Ack1 With Compound T95
pdb|3EQP|A Chain A, Crystal Structure Of Ack1 With Compound T95
pdb|3EQR|A Chain A, Crystal Structure Of Ack1 With Compound T74
pdb|3EQR|B Chain B, Crystal Structure Of Ack1 With Compound T74
Length = 276
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 60/214 (28%), Positives = 101/214 (47%), Gaps = 22/214 (10%)
Query: 385 IGDGNFAVVRQ-VYD--KHKDMDCALKIIDKSKLLGKKQMIEN---EVNILRSVNHPNII 438
+GDG+F VVR+ +D K + A+K + K +L + + +++ EVN + S++H N+I
Sbjct: 16 LGDGSFGVVRRGEWDAPSGKTVSVAVKCL-KPDVLSQPEAMDDFIREVNAMHSLDHRNLI 74
Query: 439 KLLDEYDTNNELYLVIELIKGGDLFDAISKNVK--FSEEDSKFMTQSLASALSYLHDNYI 496
+L T + +V EL G L D + K+ S++ Q +A + YL
Sbjct: 75 RLYGVVLTP-PMKMVTELAPLGSLLDRLRKHQGHFLLGTLSRYAVQ-VAEGMGYLESKRF 132
Query: 497 VHRDIKPENLLVEMSGCHVKVLKVGDFGLAQRVLR-----PMFTVCGTP-TYVAPEILNE 550
+HRD+ NLL+ ++K+GDFGL + + + M P + APE L
Sbjct: 133 IHRDLAARNLLLATR----DLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAPESLKT 188
Query: 551 SGYGVKIDVWAAGVILYILLC-GFPPFVSDTNDQ 583
+ D W GV L+ + G P++ Q
Sbjct: 189 RTFSHASDTWMFGVTLWEMFTYGQEPWIGLNGSQ 222
>pdb|4ID7|A Chain A, Ack1 Kinase In Complex With The Inhibitor
Cis-3-[8-amino-1-(4-
Phenoxyphenyl)imidazo[1,5-a]pyrazin-3-yl]cyclobutanol
Length = 273
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 60/214 (28%), Positives = 101/214 (47%), Gaps = 22/214 (10%)
Query: 385 IGDGNFAVVRQ-VYD--KHKDMDCALKIIDKSKLLGKKQMIEN---EVNILRSVNHPNII 438
+GDG+F VVR+ +D K + A+K + K +L + + +++ EVN + S++H N+I
Sbjct: 16 LGDGSFGVVRRGEWDAPSGKTVSVAVKCL-KPDVLSQPEAMDDFIREVNAMHSLDHRNLI 74
Query: 439 KLLDEYDTNNELYLVIELIKGGDLFDAISKNVK--FSEEDSKFMTQSLASALSYLHDNYI 496
+L T + +V EL G L D + K+ S++ Q +A + YL
Sbjct: 75 RLYGVVLTP-PMKMVTELAPLGSLLDRLRKHQGHFLLGTLSRYAVQ-VAEGMGYLESKRF 132
Query: 497 VHRDIKPENLLVEMSGCHVKVLKVGDFGLAQRVLR-----PMFTVCGTP-TYVAPEILNE 550
+HRD+ NLL+ ++K+GDFGL + + + M P + APE L
Sbjct: 133 IHRDLAARNLLLATR----DLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAPESLKT 188
Query: 551 SGYGVKIDVWAAGVILYILLC-GFPPFVSDTNDQ 583
+ D W GV L+ + G P++ Q
Sbjct: 189 RTFSHASDTWMFGVTLWEMFTYGQEPWIGLNGSQ 222
>pdb|3HGK|A Chain A, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|B Chain B, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|C Chain C, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|D Chain D, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
Length = 327
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 44/153 (28%), Positives = 76/153 (49%), Gaps = 13/153 (8%)
Query: 434 HPNIIKLLDEYDTNNELYLVIELIKGGD----LFDAISKNVKFSEEDSKFMTQSLASALS 489
HP+++ L+ D NE+ L+ + ++ G+ L+ + + S E + A L
Sbjct: 94 HPHLVSLIGFCDERNEMILIYKYMENGNLKRHLYGSDLPTMSMSWEQRLEICIGAARGLH 153
Query: 490 YLHDNYIVHRDIKPENLLVEMSGCHVKVLKVGDFGLAQRVLRPMFT-----VCGTPTYVA 544
YLH I+HRD+K N+L++ + V K+ DFG++++ T V GT Y+
Sbjct: 154 YLHTRAIIHRDVKSINILLDEN----FVPKITDFGISKKGTELGQTHLXXVVKGTLGYID 209
Query: 545 PEILNESGYGVKIDVWAAGVILYILLCGFPPFV 577
PE + K DV++ GV+L+ +LC V
Sbjct: 210 PEYFIKGRLTEKSDVYSFGVVLFEVLCARSAIV 242
>pdb|3V5Q|A Chain A, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
pdb|3V5Q|B Chain B, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
Length = 297
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 60/236 (25%), Positives = 104/236 (44%), Gaps = 32/236 (13%)
Query: 385 IGDGNFAVV--RQVYDKHKDMDCALKIID--KSKLLGKKQMIENEVNILRSVNHPNIIKL 440
+G+G F V + Y+ D L + K L ++ + E +L ++ H +I+K
Sbjct: 23 LGEGAFGKVFLAECYNLSPTKDKMLVAVKALKDPTLAARKDFQREAELLTNLQHEHIVKF 82
Query: 441 LDEYDTNNELYLVIELIKGGD--------------LFDAISKNVKFSEEDSKFM--TQSL 484
+ L +V E +K GD L D + K S+ + +
Sbjct: 83 YGVCGDGDPLIMVFEYMKHGDLNKFLRAHGPDAMILVDGQPRQAKGELGLSQMLHIASQI 142
Query: 485 ASALSYLHDNYIVHRDIKPENLLVEMSGCHVKVLKVGDFGLAQRVLRPMFTVCGTPT--- 541
AS + YL + VHRD+ N LV G ++ ++K+GDFG+++ V + G T
Sbjct: 143 ASGMVYLASQHFVHRDLATRNCLV---GANL-LVKIGDFGMSRDVYSTDYYRVGGHTMLP 198
Query: 542 --YVAPEILNESGYGVKIDVWAAGVILY-ILLCGFPPFVSDTNDQDELFDDILSGQ 594
++ PE + + + DVW+ GVIL+ I G P+ +N E+ + I G+
Sbjct: 199 IRWMPPESIMYRKFTTESDVWSFGVILWEIFTYGKQPWFQLSN--TEVIECITQGR 252
>pdb|3OFM|A Chain A, Structure Of A Human Ck2alpha Prime, The Paralog Isoform
Of The Catalytic Subunit Of Protein Kinase Ck2 From Homo
Sapiens
Length = 350
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 62/242 (25%), Positives = 104/242 (42%), Gaps = 51/242 (21%)
Query: 436 NIIKLLDEYD--TNNELYLVIELIKGGDLFDAISKNVKFSEEDSKFMTQSLASALSYLHD 493
NIIKL+D + LV E I D F D +F L AL Y H
Sbjct: 94 NIIKLIDTVKDPVSKTPALVFEYINNTDFKQLYQILTDF---DIRFYMYELLKALDYCHS 150
Query: 494 NYIVHRDIKPENLLVEMSGCHVKVLKVGDFGLAQRVLRPM--FTV-CGTPTYVAPEIL-N 549
I+HRD+KP N++++ K L++ D+GLA+ P + V + + PE+L +
Sbjct: 151 KGIMHRDVKPHNVMIDHQQ---KKLRLIDWGLAE-FYHPAQEYNVRVASRYFKGPELLVD 206
Query: 550 ESGYGVKIDVWAAGVILYILLCGFPPFVSDTNDQDEL----------------------- 586
Y +D+W+ G +L ++ PF ++ D+L
Sbjct: 207 YQMYDYSLDMWSLGCMLASMIFRREPFFHGQDNYDQLVRIAKVLGTEELYGYLKKYHIDL 266
Query: 587 ---FDDILSGQYGFPSPYWDD---------ISEEAKELISHMLESNPDLRFSAEDVLDHP 634
F+DIL GQ+ W++ +S EA +L+ +L + R +A++ ++HP
Sbjct: 267 DPHFNDIL-GQHS--RKRWENFIHSENRHLVSPEALDLLDKLLRYDHQQRLTAKEAMEHP 323
Query: 635 WL 636
+
Sbjct: 324 YF 325
>pdb|2QKW|B Chain B, Structural Basis For Activation Of Plant Immunity By
Bacterial Effector Protein Avrpto
Length = 321
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 43/153 (28%), Positives = 75/153 (49%), Gaps = 13/153 (8%)
Query: 434 HPNIIKLLDEYDTNNELYLVIELIKGGD----LFDAISKNVKFSEEDSKFMTQSLASALS 489
HP+++ L+ D NE+ L+ + ++ G+ L+ + + S E + A L
Sbjct: 94 HPHLVSLIGFCDERNEMILIYKYMENGNLKRHLYGSDLPTMSMSWEQRLEICIGAARGLH 153
Query: 490 YLHDNYIVHRDIKPENLLVEMSGCHVKVLKVGDFGLAQR-----VLRPMFTVCGTPTYVA 544
YLH I+HRD+K N+L++ + V K+ DFG++++ V GT Y+
Sbjct: 154 YLHTRAIIHRDVKSINILLDEN----FVPKITDFGISKKGTELDQTHLXXVVKGTLGYID 209
Query: 545 PEILNESGYGVKIDVWAAGVILYILLCGFPPFV 577
PE + K DV++ GV+L+ +LC V
Sbjct: 210 PEYFIKGRLTEKSDVYSFGVVLFEVLCARSAIV 242
>pdb|4ASZ|A Chain A, Crystal Structure Of Apo Trkb Kinase Domain
pdb|4AT3|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Cpd5n
pdb|4AT4|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Ex429
pdb|4AT5|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Gw2580
Length = 299
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 54/219 (24%), Positives = 99/219 (45%), Gaps = 28/219 (12%)
Query: 425 EVNILRSVNHPNIIKLLDEYDTNNELYLVIELIKGGDLF--------DAI-----SKNVK 471
E +L ++ H +I+K + L +V E +K GDL DA+ + +
Sbjct: 65 EAELLTNLQHEHIVKFYGVCVEGDPLIMVFEYMKHGDLNKFLRAHGPDAVLMAEGNPPTE 124
Query: 472 FSEEDSKFMTQSLASALSYLHDNYIVHRDIKPENLLVEMSGCHVKVLKVGDFGLAQRVLR 531
++ + Q +A+ + YL + VHRD+ N LV + ++K+GDFG+++ V
Sbjct: 125 LTQSQMLHIAQQIAAGMVYLASQHFVHRDLATRNCLVGEN----LLVKIGDFGMSRDVYS 180
Query: 532 PMFTVCGTPT-----YVAPEILNESGYGVKIDVWAAGVILY-ILLCGFPPFVSDTNDQDE 585
+ G T ++ PE + + + DVW+ GV+L+ I G P+ +N +E
Sbjct: 181 TDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSLGVVLWEIFTYGKQPWYQLSN--NE 238
Query: 586 LFDDILSGQYGFPSPYWDDISEEAKELISHMLESNPDLR 624
+ + I G+ P +E EL+ + P +R
Sbjct: 239 VIECITQGRV-LQRP--RTCPQEVYELMLGCWQREPHMR 274
>pdb|3E3B|X Chain X, Crystal Structure Of Catalytic Subunit Of Human Protein
Kinase Ck2alpha Prime With A Potent Indazole-Derivative
Inhibitor
Length = 339
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 62/242 (25%), Positives = 104/242 (42%), Gaps = 51/242 (21%)
Query: 436 NIIKLLDEYD--TNNELYLVIELIKGGDLFDAISKNVKFSEEDSKFMTQSLASALSYLHD 493
NIIKL+D + LV E I D F D +F L AL Y H
Sbjct: 99 NIIKLIDTVKDPVSKTPALVFEYINNTDFKQLYQILTDF---DIRFYMYELLKALDYCHS 155
Query: 494 NYIVHRDIKPENLLVEMSGCHVKVLKVGDFGLAQRVLRPM--FTV-CGTPTYVAPEIL-N 549
I+HRD+KP N++++ K L++ D+GLA+ P + V + + PE+L +
Sbjct: 156 KGIMHRDVKPHNVMIDHQQ---KKLRLIDWGLAE-FYHPAQEYNVRVASRYFKGPELLVD 211
Query: 550 ESGYGVKIDVWAAGVILYILLCGFPPFVSDTNDQDEL----------------------- 586
Y +D+W+ G +L ++ PF ++ D+L
Sbjct: 212 YQMYDYSLDMWSLGCMLASMIFRREPFFHGQDNYDQLVRIAKVLGTEELYGYLKKYHIDL 271
Query: 587 ---FDDILSGQYGFPSPYWDD---------ISEEAKELISHMLESNPDLRFSAEDVLDHP 634
F+DIL GQ+ W++ +S EA +L+ +L + R +A++ ++HP
Sbjct: 272 DPHFNDIL-GQHS--RKRWENFIHSENRHLVSPEALDLLDKLLRYDHQQRLTAKEAMEHP 328
Query: 635 WL 636
+
Sbjct: 329 YF 330
>pdb|3LCO|A Chain A, Inhibitor Bound To A Dfg-Out Structure Of The Kinase
Domain Of Csf-1r
Length = 324
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 57/245 (23%), Positives = 109/245 (44%), Gaps = 42/245 (17%)
Query: 367 ENLNIPSKLLQRYSVGQIIGDGNFAVVRQV--YDKHKD---MDCALKIIDKSKLLGKKQM 421
E P LQ G+ +G G F V + + K+ + A+K++ + +K+
Sbjct: 24 EKWEFPRNNLQ---FGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEA 80
Query: 422 IENEVNILRSVN-HPNIIKLLDEYDTNNELYLVIELIKGGDLFDAISKNVK--------- 471
+ +E+ I+ + H NI+ LL + ++ E GDL + + + +
Sbjct: 81 LMSELKIMSHLGQHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKAEAMLGPSLAP 140
Query: 472 ------FSEEDSK--------FMTQSLASALSYLHDNYIVHRDIKPENLLVEMSGCHVKV 517
+ED + + +A +++L +HRD+ N+L ++ HV
Sbjct: 141 GQDPEGLDKEDGRPLELRDLLHFSSQVAQGMAFLASKNCIHRDVAARNVL--LTNGHVA- 197
Query: 518 LKVGDFGLAQRVLR-PMFTVCGTP----TYVAPEILNESGYGVKIDVWAAGVILY-ILLC 571
K+GDFGLA+ ++ + V G ++APE + + Y V+ DVW+ G++L+ I
Sbjct: 198 -KIGDFGLARDIMNDSNYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFSL 256
Query: 572 GFPPF 576
G P+
Sbjct: 257 GLNPY 261
>pdb|2P0C|A Chain A, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein
Kina
pdb|2P0C|B Chain B, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein
Kina
pdb|3BRB|A Chain A, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Tyrosine- Protein Kinase Mer In Complex
With Adp
pdb|3BRB|B Chain B, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Tyrosine- Protein Kinase Mer In Complex
With Adp
pdb|3BPR|A Chain A, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|B Chain B, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|C Chain C, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|D Chain D, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3TCP|A Chain A, Crystal Structure Of The Catalytic Domain Of The
Proto-Oncogene Tyrosine-Protein Kinase Mer In Complex
With Inhibitor Unc569
pdb|3TCP|B Chain B, Crystal Structure Of The Catalytic Domain Of The
Proto-Oncogene Tyrosine-Protein Kinase Mer In Complex
With Inhibitor Unc569
Length = 313
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 68/267 (25%), Positives = 124/267 (46%), Gaps = 40/267 (14%)
Query: 381 VGQIIGDGNFAVVRQVYDKHKDMDCALKIIDKSKLLGKKQMIE-----NEVNILRSVNHP 435
+G+I+G+G F V + K +D +LK+ K+ L E +E ++ +HP
Sbjct: 38 LGKILGEGEFGSVMEGNLKQED-GTSLKVAVKTMKLDNSSQREIEEFLSEAACMKDFSHP 96
Query: 436 NIIKLLD---EYDTNN--ELYLVIELIKGGDL--------FDAISKNVKFSEEDSKFMTQ 482
N+I+LL E + + +++ +K GDL + K++ + KFM
Sbjct: 97 NVIRLLGVCIEMSSQGIPKPMVILPFMKYGDLHTYLLYSRLETGPKHIPL-QTLLKFMV- 154
Query: 483 SLASALSYLHDNYIVHRDIKPENLLV--EMSGCHVKVLKVGDFGLAQRVLRPMF----TV 536
+A + YL + +HRD+ N ++ +M+ C V DFGL++++ + +
Sbjct: 155 DIALGMEYLSNRNFLHRDLAARNCMLRDDMTVC------VADFGLSKKIYSGDYYRQGRI 208
Query: 537 CGTPT-YVAPEILNESGYGVKIDVWAAGVILY-ILLCGFPPFVSDTNDQDELFDDILSGQ 594
P ++A E L + Y K DVWA GV ++ I G P+ N E++D +L G
Sbjct: 209 AKMPVKWIAIESLADRVYTSKSDVWAFGVTMWEIATRGMTPYPGVQN--HEMYDYLLHG- 265
Query: 595 YGFPSPYWDDISEEAKELISHMLESNP 621
+ P +D +E E++ ++P
Sbjct: 266 HRLKQP--EDCLDELYEIMYSCWRTDP 290
>pdb|3G6H|A Chain A, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
pdb|3G6H|B Chain B, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
Length = 286
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 57/214 (26%), Positives = 97/214 (45%), Gaps = 21/214 (9%)
Query: 424 NEVNILRSVNHPNIIKLLDEYDTNNE--LYLVIELIKGGDLFDAISKNVKFSEEDSKF-- 479
E +++ + H +++L Y +E +Y+VIE + G L D + + +
Sbjct: 62 QEAQVMKKLRHEKLVQL---YAVVSEEPIYIVIEYMSKGSLLDFLKGEMGKYLRLPQLVD 118
Query: 480 MTQSLASALSYLHDNYIVHRDIKPENLLVEMSGCHVKVLKVGDFGLAQRVLRPMFTV--- 536
M +AS ++Y+ VHRD++ N+LV + V KV DFGLA+ + +T
Sbjct: 119 MAAQIASGMAYVERMNYVHRDLRAANILVGEN----LVCKVADFGLARLIEDNEYTARQG 174
Query: 537 CGTPT-YVAPEILNESGYGVKIDVWAAGVILYILLC-GFPPFVSDTNDQDELFDDILSGQ 594
P + APE + +K DVW+ G++L L G P+ N E+ D + G
Sbjct: 175 AKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVN--REVLDQVERG- 231
Query: 595 YGFPSPYWDDISEEAKELISHMLESNPDLRFSAE 628
Y P P + E +L+ +P+ R + E
Sbjct: 232 YRMPCP--PECPESLHDLMCQCWRKDPEERPTFE 263
>pdb|3G0F|A Chain A, Kit Kinase Domain Mutant D816h In Complex With Sunitinib
pdb|3G0F|B Chain B, Kit Kinase Domain Mutant D816h In Complex With Sunitinib
Length = 336
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 52/222 (23%), Positives = 96/222 (43%), Gaps = 33/222 (14%)
Query: 378 RYSVGQIIGDGNF-----AVVRQVYDKHKDMDCALKIIDKSKLLGKKQMIENEVNILRSV 432
R S G+ +G G F A + M A+K++ S L +++ + +E+ +L +
Sbjct: 47 RLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYL 106
Query: 433 -NHPNIIKLLDEYDTNNELYLVIELIKGGDLFDAISK---NVKFSEEDSKFM-------- 480
NH NI+ LL ++ E GDL + + + + S+ M
Sbjct: 107 GNHMNIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALD 166
Query: 481 -------TQSLASALSYLHDNYIVHRDIKPENLLVEMSGCHVKVLKVGDFGLAQRVLR-P 532
+ +A +++L +HRD+ N+L+ H ++ K+ DFGLA+ +
Sbjct: 167 LEDLLSFSYQVAKGMAFLASKNCIHRDLAARNILLT----HGRITKICDFGLARHIKNDS 222
Query: 533 MFTVCGTP----TYVAPEILNESGYGVKIDVWAAGVILYILL 570
+ V G ++APE + Y + DVW+ G+ L+ L
Sbjct: 223 NYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELF 264
>pdb|2VWU|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWV|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWW|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWX|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWY|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWZ|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX0|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX1|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2X9F|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2XVD|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|4BB4|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
Length = 302
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 58/237 (24%), Positives = 105/237 (44%), Gaps = 28/237 (11%)
Query: 381 VGQIIGDGNFAVV---RQVYDKHKDMDCALKIIDKSKLLGKKQMIENEVNILRSVNHPNI 437
+ ++IG G F V R K+ A+K + +++ +E +I+ HPNI
Sbjct: 20 IEEVIGAGEFGEVCRGRLKAPGKKESCVAIKTLKGGYTERQRREFLSEASIMGQFEHPNI 79
Query: 438 IKLLDEYDTNNELYLVIELIKGGDLFDAISKN-VKFSEEDSKFMTQSLASALSYLHDNYI 496
I+L + + ++ E ++ G L + N +F+ M + +AS + YL +
Sbjct: 80 IRLEGVVTNSMPVMILTEFMENGALDSFLRLNDGQFTVIQLVGMLRGIASGMRYLAEMSY 139
Query: 497 VHRDIKPENLLVEMSGCHVKVLKVGDFGLAQRVLRPMFTVCGTPT------------YVA 544
VHRD+ N+LV + V KV DFGL+ R + PT + A
Sbjct: 140 VHRDLAARNILVNSN----LVCKVSDFGLS----RFLEENSSDPTETSSLGGKIPIRWTA 191
Query: 545 PEILNESGYGVKIDVWAAGVILY-ILLCGFPPFVSDTNDQDELFDDILSGQYGFPSP 600
PE + + D W+ G++++ ++ G P+ D ++QD + + + Y P P
Sbjct: 192 PEAIAFRKFTSASDAWSYGIVMWEVMSFGERPYW-DMSNQDVI--NAIEQDYRLPPP 245
>pdb|3CJF|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 57/239 (23%), Positives = 109/239 (45%), Gaps = 29/239 (12%)
Query: 366 RENLNIPSKLLQRYSVGQIIGDGNFAVVRQVYDKHKDMDCALKIIDKSKLLGKKQMIENE 425
R+ LN+ K L R + GQ+I F + + + A+K++ + + + + +E
Sbjct: 26 RDRLNL-GKPLGRGAFGQVIEADAFGIDKTATXR----TVAVKMLKEGATHSEHRALMSE 80
Query: 426 VNILRSVNHP-NIIKLLDE-YDTNNELYLVIELIKGGDLFDAISKN----VKFSEEDSKF 479
+ IL + H N++ LL L +++E K G+L + V + + F
Sbjct: 81 LKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKDLYKDF 140
Query: 480 MTQ--------SLASALSYLHDNYIVHRDIKPENLLVEMSGCHVKVLKVGDFGLAQRVLR 531
+T +A + +L +HRD+ N+L+ V+K+ DFGLA+ + +
Sbjct: 141 LTLEHLIXYSFQVAKGMEFLASRKXIHRDLAARNILLSEK----NVVKIXDFGLARDIYK 196
Query: 532 -PMFTVCGTP----TYVAPEILNESGYGVKIDVWAAGVILY-ILLCGFPPFVSDTNDQD 584
P + G ++APE + + Y ++ DVW+ GV+L+ I G P+ D++
Sbjct: 197 DPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEE 255
>pdb|1T46|A Chain A, Structural Basis For The Autoinhibition And Sti-571
Inhibition Of C-kit Tyrosine Kinase
Length = 313
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 52/222 (23%), Positives = 96/222 (43%), Gaps = 33/222 (14%)
Query: 378 RYSVGQIIGDGNF-----AVVRQVYDKHKDMDCALKIIDKSKLLGKKQMIENEVNILRSV 432
R S G+ +G G F A + M A+K++ S L +++ + +E+ +L +
Sbjct: 24 RLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYL 83
Query: 433 -NHPNIIKLLDEYDTNNELYLVIELIKGGDLFDAISK---NVKFSEEDSKFM-------- 480
NH NI+ LL ++ E GDL + + + + S+ M
Sbjct: 84 GNHMNIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALD 143
Query: 481 -------TQSLASALSYLHDNYIVHRDIKPENLLVEMSGCHVKVLKVGDFGLAQRVLR-P 532
+ +A +++L +HRD+ N+L+ H ++ K+ DFGLA+ +
Sbjct: 144 LEDLLSFSYQVAKGMAFLASKNCIHRDLAARNILLT----HGRITKICDFGLARDIKNDS 199
Query: 533 MFTVCGTP----TYVAPEILNESGYGVKIDVWAAGVILYILL 570
+ V G ++APE + Y + DVW+ G+ L+ L
Sbjct: 200 NYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELF 241
>pdb|3CLY|A Chain A, Crystal Structure Of Fgf Receptor 2 (Fgfr2) Kinase Domains
Trapped In Trans-Phosphorylation Reaction
Length = 334
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 59/229 (25%), Positives = 104/229 (45%), Gaps = 34/229 (14%)
Query: 378 RYSVGQIIGDGNFAVVRQV------YDKHKD-MDCALKIIDKSKLLGKKQMIENEVNILR 430
+ ++G+ +G+G F V DK K+ + A+K++ + +E+ +++
Sbjct: 36 KLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMK 95
Query: 431 SVN-HPNIIKLLDEYDTNNELYLVIELIKGGDLFDAISK----NVKFS-------EEDSK 478
+ H NII LL + LY+++E G+L + + +++S EE
Sbjct: 96 MIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMT 155
Query: 479 F-----MTQSLASALSYLHDNYIVHRDIKPENLLVEMSGCHVKVLKVGDFGLAQRV---- 529
F T LA + YL +HRD+ N+LV V+K+ DFGLA+ +
Sbjct: 156 FKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLV----TENNVMKIADFGLARDINNID 211
Query: 530 LRPMFTVCGTPT-YVAPEILNESGYGVKIDVWAAGVILY-ILLCGFPPF 576
T P ++APE L + Y + DVW+ GV+++ I G P+
Sbjct: 212 XXKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPY 260
>pdb|2PSQ|A Chain A, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
pdb|2PSQ|B Chain B, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
Length = 370
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 60/229 (26%), Positives = 107/229 (46%), Gaps = 34/229 (14%)
Query: 378 RYSVGQIIGDGNFAVVRQV------YDKHKD-MDCALKIIDKSKLLGKKQMIENEVNILR 430
+ ++G+ +G+G F V DK K+ + A+K++ + +E+ +++
Sbjct: 82 KLTLGKPLGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMK 141
Query: 431 SVN-HPNIIKLLDEYDTNNELYLVIELIKGGDLFDAISK----NVKFS-------EEDSK 478
+ H NII LL + LY+++E G+L + + +++S EE
Sbjct: 142 MIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMT 201
Query: 479 F-----MTQSLASALSYLHDNYIVHRDIKPENLLVEMSGCHVKVLKVGDFGLAQRVLRPM 533
F T LA + YL +HRD+ N+LV + V+K+ DFGLA+ +
Sbjct: 202 FKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVTENN----VMKIADFGLARDINNID 257
Query: 534 F---TVCGT-PT-YVAPEILNESGYGVKIDVWAAGVILY-ILLCGFPPF 576
+ T G P ++APE L + Y + DVW+ GV+++ I G P+
Sbjct: 258 YYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPY 306
>pdb|3UIM|A Chain A, Structural Basis For The Impact Of Phosphorylation On
Plant Receptor- Like Kinase Bak1 Activation
pdb|3ULZ|A Chain A, Crystal Structure Of Apo Bak1
Length = 326
Score = 59.7 bits (143), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 62/226 (27%), Positives = 100/226 (44%), Gaps = 24/226 (10%)
Query: 384 IIGDGNFAVVRQVYDKHKDMD---CALKIIDKSKLLGKKQMIENEVNILRSVNHPNIIKL 440
I+G G F +VY K + D A+K + + + G + + EV ++ H N+++L
Sbjct: 37 ILGRGGFG---KVY-KGRLADGXLVAVKRLKEERTQGGELQFQTEVEMISMAVHRNLLRL 92
Query: 441 LDEYDTNNELYLVIELIKGGDLFDAISKNVK----FSEEDSKFMTQSLASALSYLHDN-- 494
T E LV + G + + + + + + A L+YLHD+
Sbjct: 93 RGFCMTPTERLLVYPYMANGSVASCLRERPESQPPLDWPKRQRIALGSARGLAYLHDHCD 152
Query: 495 -YIVHRDIKPENLLVEMSGCHVKVLKVGDFGLAQRV----LRPMFTVCGTPTYVAPEILN 549
I+HRD+K N+L++ V VGDFGLA+ + V G ++APE L+
Sbjct: 153 PKIIHRDVKAANILLDEEFEAV----VGDFGLAKLMDYKDXHVXXAVRGXIGHIAPEYLS 208
Query: 550 ESGYGVKIDVWAAGVILYILLCGFPPF--VSDTNDQDELFDDILSG 593
K DV+ GV+L L+ G F ND D + D + G
Sbjct: 209 TGKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLDWVKG 254
>pdb|2PVF|A Chain A, Crystal Structure Of Tyrosine Phosphorylated Activated Fgf
Receptor 2 (Fgfr2) Kinase Domain In Complex With Atp
Analog And Substrate Peptide
Length = 334
Score = 59.7 bits (143), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 58/229 (25%), Positives = 101/229 (44%), Gaps = 34/229 (14%)
Query: 378 RYSVGQIIGDGNFAVVRQV------YDKHKD-MDCALKIIDKSKLLGKKQMIENEVNILR 430
+ ++G+ +G+G F V DK K+ + A+K++ + +E+ +++
Sbjct: 36 KLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMK 95
Query: 431 SVN-HPNIIKLLDEYDTNNELYLVIELIKGGDLFDAISKNV-----------KFSEEDSK 478
+ H NII LL + LY+++E G+L + + + EE
Sbjct: 96 MIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEXSYDINRVPEEQMT 155
Query: 479 F-----MTQSLASALSYLHDNYIVHRDIKPENLLVEMSGCHVKVLKVGDFGLAQRV---- 529
F T LA + YL +HRD+ N+LV V+K+ DFGLA+ +
Sbjct: 156 FKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLV----TENNVMKIADFGLARDINNID 211
Query: 530 LRPMFTVCGTPT-YVAPEILNESGYGVKIDVWAAGVILY-ILLCGFPPF 576
T P ++APE L + Y + DVW+ GV+++ I G P+
Sbjct: 212 XXKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPY 260
>pdb|2Y4I|B Chain B, Ksr2-Mek1 Heterodimer
Length = 319
Score = 59.7 bits (143), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 59/254 (23%), Positives = 107/254 (42%), Gaps = 39/254 (15%)
Query: 342 SGREVPKMPTKTSVARCATATIKRRENLNIPSKLLQRYSVGQIIGDGNFAVVRQVYDKHK 401
S R P+ ++TS+ + +IP ++ +G++IG G F QVY
Sbjct: 10 SARSFPRKASQTSIFL---------QEWDIP---FEQLEIGELIGKGRFG---QVYHGRW 54
Query: 402 DMDCALKIIDKSK-LLGKKQMIENEVNILRSVNHPNIIKLLDEYDTNNELYLVIELIKGG 460
+ A+++ID + + + + EV R H N++ + + L ++ L KG
Sbjct: 55 HGEVAIRLIDIERDNEDQLKAFKREVMAYRQTRHENVVLFMGACMSPPHLAIITSLCKGR 114
Query: 461 DLFDAIS-KNVKFSEEDSKFMTQSLASALSYLHDNYIVHRDIKPENLLVEMSGCHVKVLK 519
L+ + + ++ + Q + + YLH I+H+D+K +N+ + KV+
Sbjct: 115 TLYSVVRDAKIVLDVNKTRQIAQEIVKGMGYLHAKGILHKDLKSKNVFYDNG----KVV- 169
Query: 520 VGDFGL--------AQRVLRPMFTVCGTPTYVAPEILNESG---------YGVKIDVWAA 562
+ DFGL A R + G ++APEI+ + + DV+A
Sbjct: 170 ITDFGLFSISGVLQAGRREDKLRIQNGWLCHLAPEIIRQLSPDTEEDKLPFSKHSDVFAL 229
Query: 563 GVILYILLCGFPPF 576
G I Y L PF
Sbjct: 230 GTIWYELHAREWPF 243
>pdb|3CJG|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 59.7 bits (143), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 57/239 (23%), Positives = 109/239 (45%), Gaps = 29/239 (12%)
Query: 366 RENLNIPSKLLQRYSVGQIIGDGNFAVVRQVYDKHKDMDCALKIIDKSKLLGKKQMIENE 425
R+ LN+ K L R + GQ+I F + + + A+K++ + + + + +E
Sbjct: 26 RDRLNL-GKPLGRGAFGQVIEADAFGIDKTATXR----TVAVKMLKEGATHSEHRALMSE 80
Query: 426 VNILRSVNHP-NIIKLLDE-YDTNNELYLVIELIKGGDLFDAISKN----VKFSEEDSKF 479
+ IL + H N++ LL L +++E K G+L + V + + F
Sbjct: 81 LKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKDLYKDF 140
Query: 480 MTQ--------SLASALSYLHDNYIVHRDIKPENLLVEMSGCHVKVLKVGDFGLAQRVLR 531
+T +A + +L +HRD+ N+L+ V+K+ DFGLA+ + +
Sbjct: 141 LTLEHLICYSFQVAKGMEFLASRKXIHRDLAARNILLSEK----NVVKICDFGLARDIYK 196
Query: 532 -PMFTVCGTP----TYVAPEILNESGYGVKIDVWAAGVILY-ILLCGFPPFVSDTNDQD 584
P + G ++APE + + Y ++ DVW+ GV+L+ I G P+ D++
Sbjct: 197 DPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEE 255
>pdb|1NA7|A Chain A, Crystal Structure Of The Catalytic Subunit Of Human
Protein Kinase Ck2
Length = 329
Score = 59.7 bits (143), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 76/332 (22%), Positives = 142/332 (42%), Gaps = 63/332 (18%)
Query: 354 SVARCAT--ATIKRRENLNIPSKLLQR-----YSVGQIIGDGNFAVVRQVYDKHKDMDCA 406
S AR T T + RE + S +++ Y + + +G G ++ V + + +
Sbjct: 7 SRARVYTDVNTHRPREYWDYASHVVEWGNQDDYQLVRKLGRGKYSEVFEAINITNNEKVV 66
Query: 407 LKIIDKSKLLGKKQMIENEVNILRSV-NHPNIIKLLD--EYDTNNELYLVIELIKGGDLF 463
+KI+ K K I+ E+ IL ++ PNII L D + + LV E + D F
Sbjct: 67 VKILKPVK----KNKIKREIKILENLRGGPNIITLADIVKDPVSRTPALVFEHVNNTD-F 121
Query: 464 DAISKNVKFSEEDSKFMTQSLASALSYLHDNYIVHRDIKPENLLVEMSGCHVKVLKVGDF 523
+ + + ++ D +F + AL Y H I+HRD+KP N++++ + L++ D+
Sbjct: 122 KQLYQTL--TDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVMIDHEH---RKLRLIDW 176
Query: 524 GLAQRVLRP--MFTV-CGTPTYVAPEIL-NESGYGVKIDVWAAGVILYILLCGFPPFVSD 579
GLA+ P + V + + PE+L + Y +D+W+ G +L ++ PF
Sbjct: 177 GLAE-FYHPGQEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHG 235
Query: 580 TNDQDEL--------------------------FDDILSGQYGFPSPYWDD--------- 604
++ D+L F+DIL W+
Sbjct: 236 HDNYDQLVRIAKVLGTEDLYDYIDKYNIELDPRFNDILGRH---SRKRWERFVHSENQHL 292
Query: 605 ISEEAKELISHMLESNPDLRFSAEDVLDHPWL 636
+S EA + + +L + R +A + ++HP+
Sbjct: 293 VSPEALDFLDKLLRYDHQSRLTAREAMEHPYF 324
>pdb|1PKG|A Chain A, Structure Of A C-kit Kinase Product Complex
pdb|1PKG|B Chain B, Structure Of A C-kit Kinase Product Complex
Length = 329
Score = 59.7 bits (143), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 52/222 (23%), Positives = 96/222 (43%), Gaps = 33/222 (14%)
Query: 378 RYSVGQIIGDGNF-----AVVRQVYDKHKDMDCALKIIDKSKLLGKKQMIENEVNILRSV 432
R S G+ +G G F A + M A+K++ S L +++ + +E+ +L +
Sbjct: 40 RLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYL 99
Query: 433 -NHPNIIKLLDEYDTNNELYLVIELIKGGDLFDAISK---NVKFSEEDSKFM-------- 480
NH NI+ LL ++ E GDL + + + + S+ M
Sbjct: 100 GNHMNIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALD 159
Query: 481 -------TQSLASALSYLHDNYIVHRDIKPENLLVEMSGCHVKVLKVGDFGLAQRVLR-P 532
+ +A +++L +HRD+ N+L+ H ++ K+ DFGLA+ +
Sbjct: 160 LEDLLSFSYQVAKGMAFLASKNCIHRDLAARNILLT----HGRITKICDFGLARDIKNDS 215
Query: 533 MFTVCGTP----TYVAPEILNESGYGVKIDVWAAGVILYILL 570
+ V G ++APE + Y + DVW+ G+ L+ L
Sbjct: 216 NYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELF 257
>pdb|2PVY|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|C Chain C, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|D Chain D, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome
Length = 324
Score = 59.7 bits (143), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 59/229 (25%), Positives = 106/229 (46%), Gaps = 34/229 (14%)
Query: 378 RYSVGQIIGDGNFAVVRQV------YDKHKD-MDCALKIIDKSKLLGKKQMIENEVNILR 430
+ ++G+ +G+G F V DK K+ + A+K++ + +E+ +++
Sbjct: 36 KLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMK 95
Query: 431 SVN-HPNIIKLLDEYDTNNELYLVIELIKGGDLFDAISK----NVKFS-------EEDSK 478
+ H NII LL + LY+++E G+L + + +++S EE
Sbjct: 96 MIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMT 155
Query: 479 F-----MTQSLASALSYLHDNYIVHRDIKPENLLVEMSGCHVKVLKVGDFGLAQRVLRPM 533
F T LA + YL +HRD+ N+LV + V+K+ DFGLA+ +
Sbjct: 156 FKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVTEN----NVMKIADFGLARDINNID 211
Query: 534 FTVCGT----PT-YVAPEILNESGYGVKIDVWAAGVILY-ILLCGFPPF 576
+ T P ++APE L + Y + DVW+ GV+++ I G P+
Sbjct: 212 YYKNTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPY 260
>pdb|3G0E|A Chain A, Kit Kinase Domain In Complex With Sunitinib
Length = 336
Score = 59.3 bits (142), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 52/222 (23%), Positives = 96/222 (43%), Gaps = 33/222 (14%)
Query: 378 RYSVGQIIGDGNF-----AVVRQVYDKHKDMDCALKIIDKSKLLGKKQMIENEVNILRSV 432
R S G+ +G G F A + M A+K++ S L +++ + +E+ +L +
Sbjct: 47 RLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYL 106
Query: 433 -NHPNIIKLLDEYDTNNELYLVIELIKGGDLFDAISK---NVKFSEEDSKFM-------- 480
NH NI+ LL ++ E GDL + + + + S+ M
Sbjct: 107 GNHMNIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALD 166
Query: 481 -------TQSLASALSYLHDNYIVHRDIKPENLLVEMSGCHVKVLKVGDFGLAQRVLR-P 532
+ +A +++L +HRD+ N+L+ H ++ K+ DFGLA+ +
Sbjct: 167 LEDLLSFSYQVAKGMAFLASKNCIHRDLAARNILLT----HGRITKICDFGLARDIKNDS 222
Query: 533 MFTVCGTP----TYVAPEILNESGYGVKIDVWAAGVILYILL 570
+ V G ++APE + Y + DVW+ G+ L+ L
Sbjct: 223 NYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELF 264
>pdb|2PZ5|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZ5|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 59.3 bits (142), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 60/229 (26%), Positives = 107/229 (46%), Gaps = 34/229 (14%)
Query: 378 RYSVGQIIGDGNFAVVRQV------YDKHKD-MDCALKIIDKSKLLGKKQMIENEVNILR 430
+ ++G+ +G+G F V DK K+ + A+K++ + +E+ +++
Sbjct: 36 KLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMK 95
Query: 431 SVN-HPNIIKLLDEYDTNNELYLVIELIKGGDLFDAISK----NVKFS-------EEDSK 478
+ H NII LL + LY+++E G+L + + +++S EE
Sbjct: 96 MIGKHKNIITLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMT 155
Query: 479 F-----MTQSLASALSYLHDNYIVHRDIKPENLLVEMSGCHVKVLKVGDFGLAQRVLRPM 533
F T LA + YL +HRD+ N+LV + V+K+ DFGLA+ +
Sbjct: 156 FKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVTEN----NVMKIADFGLARDINNID 211
Query: 534 F---TVCGT-PT-YVAPEILNESGYGVKIDVWAAGVILY-ILLCGFPPF 576
+ T G P ++APE L + Y + DVW+ GV+++ I G P+
Sbjct: 212 YYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPY 260
>pdb|2PWL|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome.
pdb|2PWL|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 59.3 bits (142), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 60/229 (26%), Positives = 107/229 (46%), Gaps = 34/229 (14%)
Query: 378 RYSVGQIIGDGNFAVVRQV------YDKHKD-MDCALKIIDKSKLLGKKQMIENEVNILR 430
+ ++G+ +G+G F V DK K+ + A+K++ + +E+ +++
Sbjct: 36 KLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMK 95
Query: 431 SVN-HPNIIKLLDEYDTNNELYLVIELIKGGDLFDAISK----NVKFS-------EEDSK 478
+ H NII LL + LY+++E G+L + + +++S EE
Sbjct: 96 MIGKHKNIIHLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMT 155
Query: 479 F-----MTQSLASALSYLHDNYIVHRDIKPENLLVEMSGCHVKVLKVGDFGLAQRVLRPM 533
F T LA + YL +HRD+ N+LV + V+K+ DFGLA+ +
Sbjct: 156 FKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVTEN----NVMKIADFGLARDINNID 211
Query: 534 F---TVCGT-PT-YVAPEILNESGYGVKIDVWAAGVILY-ILLCGFPPF 576
+ T G P ++APE L + Y + DVW+ GV+++ I G P+
Sbjct: 212 YYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPY 260
>pdb|1T45|A Chain A, Structural Basis For The Autoinhibition And Sti-571
Inhibition Of C- Kit Tyrosine Kinase
Length = 331
Score = 59.3 bits (142), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 52/222 (23%), Positives = 96/222 (43%), Gaps = 33/222 (14%)
Query: 378 RYSVGQIIGDGNF-----AVVRQVYDKHKDMDCALKIIDKSKLLGKKQMIENEVNILRSV 432
R S G+ +G G F A + M A+K++ S L +++ + +E+ +L +
Sbjct: 42 RLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYL 101
Query: 433 -NHPNIIKLLDEYDTNNELYLVIELIKGGDLFDAISK---NVKFSEEDSKFM-------- 480
NH NI+ LL ++ E GDL + + + + S+ M
Sbjct: 102 GNHMNIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALD 161
Query: 481 -------TQSLASALSYLHDNYIVHRDIKPENLLVEMSGCHVKVLKVGDFGLAQRVLR-P 532
+ +A +++L +HRD+ N+L+ H ++ K+ DFGLA+ +
Sbjct: 162 LEDLLSFSYQVAKGMAFLASKNCIHRDLAARNILLT----HGRITKICDFGLARDIKNDS 217
Query: 533 MFTVCGTP----TYVAPEILNESGYGVKIDVWAAGVILYILL 570
+ V G ++APE + Y + DVW+ G+ L+ L
Sbjct: 218 NYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELF 259
>pdb|3OEZ|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OEZ|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OF0|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3OF0|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3QLF|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLF|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLG|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
pdb|3QLG|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
Length = 286
Score = 59.3 bits (142), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 56/214 (26%), Positives = 96/214 (44%), Gaps = 21/214 (9%)
Query: 424 NEVNILRSVNHPNIIKLLDEYDTNNE--LYLVIELIKGGDLFDAISKNVKFSEEDSKF-- 479
E +++ + H +++L Y +E +Y+V E + G L D + + +
Sbjct: 62 QEAQVMKKIRHEKLVQL---YAVVSEEPIYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVD 118
Query: 480 MTQSLASALSYLHDNYIVHRDIKPENLLVEMSGCHVKVLKVGDFGLAQRVLRPMFTV--- 536
M +AS ++Y+ VHRD++ N+LV + V KV DFGLA+ + +T
Sbjct: 119 MAAQIASGMAYVERMNYVHRDLRAANILVGEN----LVCKVADFGLARLIEDNEYTARQG 174
Query: 537 CGTPT-YVAPEILNESGYGVKIDVWAAGVILYILLC-GFPPFVSDTNDQDELFDDILSGQ 594
P + APE + +K DVW+ G++L L G P+ N E+ D + G
Sbjct: 175 AKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVN--REVLDQVERG- 231
Query: 595 YGFPSPYWDDISEEAKELISHMLESNPDLRFSAE 628
Y P P + E +L+ +P+ R + E
Sbjct: 232 YRMPCP--PECPESLHDLMCQCWRKDPEERPTFE 263
>pdb|2PZP|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
pdb|2PZP|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 59.3 bits (142), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 60/229 (26%), Positives = 107/229 (46%), Gaps = 34/229 (14%)
Query: 378 RYSVGQIIGDGNFAVVRQV------YDKHKD-MDCALKIIDKSKLLGKKQMIENEVNILR 430
+ ++G+ +G+G F V DK K+ + A+K++ + +E+ +++
Sbjct: 36 KLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEEDLSDLVSEMEMMK 95
Query: 431 SVN-HPNIIKLLDEYDTNNELYLVIELIKGGDLFDAISK----NVKFS-------EEDSK 478
+ H NII LL + LY+++E G+L + + +++S EE
Sbjct: 96 MIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMT 155
Query: 479 F-----MTQSLASALSYLHDNYIVHRDIKPENLLVEMSGCHVKVLKVGDFGLAQRVLRPM 533
F T LA + YL +HRD+ N+LV + V+K+ DFGLA+ +
Sbjct: 156 FKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVTEN----NVMKIADFGLARDINNID 211
Query: 534 F---TVCGT-PT-YVAPEILNESGYGVKIDVWAAGVILY-ILLCGFPPF 576
+ T G P ++APE L + Y + DVW+ GV+++ I G P+
Sbjct: 212 YYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPY 260
>pdb|1GJO|A Chain A, The Fgfr2 Tyrosine Kinase Domain
pdb|1OEC|A Chain A, Fgfr2 Kinase Domain
Length = 316
Score = 59.3 bits (142), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 59/229 (25%), Positives = 106/229 (46%), Gaps = 34/229 (14%)
Query: 378 RYSVGQIIGDGNFAVVRQV------YDKHKD-MDCALKIIDKSKLLGKKQMIENEVNILR 430
+ ++G+ +G+G F V DK K+ + A+K++ + +E+ +++
Sbjct: 28 KLTLGKPLGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMK 87
Query: 431 SVN-HPNIIKLLDEYDTNNELYLVIELIKGGDLFDAISK----NVKFS-------EEDSK 478
+ H NII LL + LY+++E G+L + + +++S EE
Sbjct: 88 MIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMT 147
Query: 479 F-----MTQSLASALSYLHDNYIVHRDIKPENLLVEMSGCHVKVLKVGDFGLAQRVLRPM 533
F T LA + YL +HRD+ N+LV + V+K+ DFGLA+ +
Sbjct: 148 FKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVTEN----NVMKIADFGLARDINNID 203
Query: 534 F---TVCG--TPTYVAPEILNESGYGVKIDVWAAGVILY-ILLCGFPPF 576
+ T G ++APE L + Y + DVW+ GV+++ I G P+
Sbjct: 204 YYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPY 252
>pdb|3RI1|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
pdb|3RI1|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
Length = 313
Score = 59.3 bits (142), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 60/229 (26%), Positives = 107/229 (46%), Gaps = 34/229 (14%)
Query: 378 RYSVGQIIGDGNFAVVRQV------YDKHKD-MDCALKIIDKSKLLGKKQMIENEVNILR 430
+ ++G+ +G+G F V DK K+ + A+K++ + +E+ +++
Sbjct: 25 KLTLGKPLGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMK 84
Query: 431 SVN-HPNIIKLLDEYDTNNELYLVIELIKGGDLFDAISK----NVKFS-------EEDSK 478
+ H NII LL + LY+++E G+L + + +++S EE
Sbjct: 85 MIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMT 144
Query: 479 F-----MTQSLASALSYLHDNYIVHRDIKPENLLVEMSGCHVKVLKVGDFGLAQRVLRPM 533
F T LA + YL +HRD+ N+LV + V+K+ DFGLA+ +
Sbjct: 145 FKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVTEN----NVMKIADFGLARDINNID 200
Query: 534 F---TVCGT-PT-YVAPEILNESGYGVKIDVWAAGVILY-ILLCGFPPF 576
+ T G P ++APE L + Y + DVW+ GV+++ I G P+
Sbjct: 201 YYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPY 249
>pdb|1YOL|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
pdb|1YOL|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
Length = 283
Score = 58.9 bits (141), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 59/220 (26%), Positives = 99/220 (45%), Gaps = 33/220 (15%)
Query: 424 NEVNILRSVNHPNIIKLLDEYDTNNE--LYLVIELIKGGDLFDAISKNVKFSEEDSKF-- 479
E +++ + H +++L Y +E +Y+V E + G L D + E K+
Sbjct: 59 QEAQVMKKLRHEKLVQL---YAVVSEEPIYIVTEYMNKGSLLDFLKG------ETGKYLR 109
Query: 480 ------MTQSLASALSYLHDNYIVHRDIKPENLLVEMSGCHVKVLKVGDFGLAQRVLRPM 533
M+ +AS ++Y+ VHRD++ N+LV G ++ V KV DFGLA+ +
Sbjct: 110 LPQLVDMSAQIASGMAYVERMNYVHRDLRAANILV---GENL-VCKVADFGLARLIEDNE 165
Query: 534 FTV---CGTPT-YVAPEILNESGYGVKIDVWAAGVILYILLC-GFPPFVSDTNDQDELFD 588
+T P + APE + +K DVW+ G++L L G P+ N E+ D
Sbjct: 166 YTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVN--REVLD 223
Query: 589 DILSGQYGFPSPYWDDISEEAKELISHMLESNPDLRFSAE 628
+ G Y P P + E +L+ P+ R + E
Sbjct: 224 QVERG-YRMPCP--PECPESLHDLMCQCWRKEPEERPTFE 260
>pdb|1FMK|A Chain A, Crystal Structure Of Human Tyrosine-Protein Kinase C-Src
pdb|2SRC|A Chain A, Crystal Structure Of Human Tyrosine-protein Kinase C-src,
In Complex With Amp-pnp
Length = 452
Score = 58.9 bits (141), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 57/216 (26%), Positives = 95/216 (43%), Gaps = 33/216 (15%)
Query: 424 NEVNILRSVNHPNIIKLLDEYDTNNE--LYLVIELIKGGDLFDAISKNVKFSEEDSKF-- 479
E +++ + H +++L Y +E +Y+V E + G L D + E K+
Sbjct: 228 QEAQVMKKLRHEKLVQL---YAVVSEEPIYIVTEYMSKGSLLDFLKG------ETGKYLR 278
Query: 480 ------MTQSLASALSYLHDNYIVHRDIKPENLLVEMSGCHVKVLKVGDFGLAQRVLRPM 533
M +AS ++Y+ VHRD++ N+LV G ++ V KV DFGLA+ +
Sbjct: 279 LPQLVDMAAQIASGMAYVERMNYVHRDLRAANILV---GENL-VCKVADFGLARLIEDNE 334
Query: 534 FTVCGTP----TYVAPEILNESGYGVKIDVWAAGVILYILLC-GFPPFVSDTNDQDELFD 588
+T + APE + +K DVW+ G++L L G P+ N E+ D
Sbjct: 335 YTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVN--REVLD 392
Query: 589 DILSGQYGFPSPYWDDISEEAKELISHMLESNPDLR 624
+ G Y P P + E +L+ P+ R
Sbjct: 393 QVERG-YRMPCP--PECPESLHDLMCQCWRKEPEER 425
>pdb|3B2T|A Chain A, Structure Of Phosphotransferase
pdb|3B2T|B Chain B, Structure Of Phosphotransferase
Length = 311
Score = 58.9 bits (141), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 59/229 (25%), Positives = 105/229 (45%), Gaps = 34/229 (14%)
Query: 378 RYSVGQIIGDGNFAVVRQV------YDKHKD-MDCALKIIDKSKLLGKKQMIENEVNILR 430
+ ++G+ +G+G F V DK K+ + A+K++ + +E+ +++
Sbjct: 23 KLTLGKPLGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMK 82
Query: 431 SVN-HPNIIKLLDEYDTNNELYLVIELIKGGDLFDAISK----NVKFS-------EEDSK 478
+ H NII LL + LY+++E G+L + + +++S EE
Sbjct: 83 MIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMT 142
Query: 479 F-----MTQSLASALSYLHDNYIVHRDIKPENLLVEMSGCHVKVLKVGDFGLAQRV---- 529
F T LA + YL +HRD+ N+LV + V+K+ DFGLA+ +
Sbjct: 143 FKDLVSCTYQLARGMEYLASQKCIHRDLTARNVLVTEN----NVMKIADFGLARDINNID 198
Query: 530 LRPMFTVCGTPT-YVAPEILNESGYGVKIDVWAAGVILY-ILLCGFPPF 576
T P ++APE L + Y + DVW+ GV+++ I G P+
Sbjct: 199 YYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPY 247
>pdb|1Y57|A Chain A, Structure Of Unphosphorylated C-Src In Complex With An
Inhibitor
Length = 452
Score = 58.9 bits (141), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 57/220 (25%), Positives = 95/220 (43%), Gaps = 33/220 (15%)
Query: 424 NEVNILRSVNHPNIIKLLDEYDTNNE--LYLVIELIKGGDLFDAISKNVKFSEEDSKF-- 479
E +++ + H +++L Y +E +Y+V E + G L D + E K+
Sbjct: 228 QEAQVMKKLRHEKLVQL---YAVVSEEPIYIVTEYMSKGSLLDFLKG------ETGKYLR 278
Query: 480 ------MTQSLASALSYLHDNYIVHRDIKPENLLVEMSGCHVKVLKVGDFGLAQRVLRPM 533
M +AS ++Y+ VHRD++ N+LV + V KV DFGLA+ +
Sbjct: 279 LPQLVDMAAQIASGMAYVERMNYVHRDLRAANILVGEN----LVCKVADFGLARLIEDNE 334
Query: 534 FTVCGTP----TYVAPEILNESGYGVKIDVWAAGVILYILLC-GFPPFVSDTNDQDELFD 588
+T + APE + +K DVW+ G++L L G P+ N E+ D
Sbjct: 335 YTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVN--REVLD 392
Query: 589 DILSGQYGFPSPYWDDISEEAKELISHMLESNPDLRFSAE 628
+ G Y P P + E +L+ P+ R + E
Sbjct: 393 QVERG-YRMPCP--PECPESLHDLMCQCWRKEPEERPTFE 429
>pdb|1YOJ|A Chain A, Crystal Structure Of Src Kinase Domain
pdb|1YOJ|B Chain B, Crystal Structure Of Src Kinase Domain
pdb|1YOM|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
pdb|1YOM|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
Length = 283
Score = 58.9 bits (141), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 59/220 (26%), Positives = 99/220 (45%), Gaps = 33/220 (15%)
Query: 424 NEVNILRSVNHPNIIKLLDEYDTNNE--LYLVIELIKGGDLFDAISKNVKFSEEDSKF-- 479
E +++ + H +++L Y +E +Y+V E + G L D + E K+
Sbjct: 59 QEAQVMKKLRHEKLVQL---YAVVSEEPIYIVTEYMNKGSLLDFLKG------ETGKYLR 109
Query: 480 ------MTQSLASALSYLHDNYIVHRDIKPENLLVEMSGCHVKVLKVGDFGLAQRVLRPM 533
M+ +AS ++Y+ VHRD++ N+LV G ++ V KV DFGLA+ +
Sbjct: 110 LPQLVDMSAQIASGMAYVERMNYVHRDLRAANILV---GENL-VCKVADFGLARLIEDNE 165
Query: 534 FTV---CGTPT-YVAPEILNESGYGVKIDVWAAGVILYILLC-GFPPFVSDTNDQDELFD 588
+T P + APE + +K DVW+ G++L L G P+ N E+ D
Sbjct: 166 WTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVN--REVLD 223
Query: 589 DILSGQYGFPSPYWDDISEEAKELISHMLESNPDLRFSAE 628
+ G Y P P + E +L+ P+ R + E
Sbjct: 224 QVERG-YRMPCP--PECPESLHDLMCQCWRKEPEERPTFE 260
>pdb|2H8H|A Chain A, Src Kinase In Complex With A Quinazoline Inhibitor
Length = 535
Score = 58.9 bits (141), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 54/214 (25%), Positives = 91/214 (42%), Gaps = 29/214 (13%)
Query: 424 NEVNILRSVNHPNIIKLLDEYDTNNELYLVIELIKGGDLFDAISKNVKFSEEDSKF---- 479
E +++ + H +++L + +Y+V E + G L D + E K+
Sbjct: 311 QEAQVMKKLRHEKLVQLY-AVVSEEPIYIVTEYMSKGSLLDFLKG------ETGKYLRLP 363
Query: 480 ----MTQSLASALSYLHDNYIVHRDIKPENLLVEMSGCHVKVLKVGDFGLAQRVLRPMFT 535
M +AS ++Y+ VHRD++ N+LV + V KV DFGLA+ + +T
Sbjct: 364 QLVDMAAQIASGMAYVERMNYVHRDLRAANILVGEN----LVCKVADFGLARLIEDNEYT 419
Query: 536 VCGTP----TYVAPEILNESGYGVKIDVWAAGVILYILLC-GFPPFVSDTNDQDELFDDI 590
+ APE + +K DVW+ G++L L G P+ N E+ D +
Sbjct: 420 ARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVN--REVLDQV 477
Query: 591 LSGQYGFPSPYWDDISEEAKELISHMLESNPDLR 624
G Y P P + E +L+ P+ R
Sbjct: 478 ERG-YRMPCP--PECPESLHDLMCQCWRKEPEER 508
>pdb|3SVV|A Chain A, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
pdb|3SVV|B Chain B, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
Length = 286
Score = 58.9 bits (141), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 56/214 (26%), Positives = 96/214 (44%), Gaps = 21/214 (9%)
Query: 424 NEVNILRSVNHPNIIKLLDEYDTNNE--LYLVIELIKGGDLFDAISKNVKFSEEDSKF-- 479
E +++ + H +++L Y +E +Y+V E + G L D + + +
Sbjct: 62 QEAQVMKKLRHEKLVQL---YAVVSEEPIYIVCEYMSKGSLLDFLKGEMGKYLRLPQLVD 118
Query: 480 MTQSLASALSYLHDNYIVHRDIKPENLLVEMSGCHVKVLKVGDFGLAQRVLRPMFTV--- 536
M +AS ++Y+ VHRD++ N+LV + V KV DFGLA+ + +T
Sbjct: 119 MAAQIASGMAYVERMNYVHRDLRAANILVGEN----LVCKVADFGLARLIEDNEYTARQG 174
Query: 537 CGTPT-YVAPEILNESGYGVKIDVWAAGVILYILLC-GFPPFVSDTNDQDELFDDILSGQ 594
P + APE + +K DVW+ G++L L G P+ N E+ D + G
Sbjct: 175 AKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVN--REVLDQVERG- 231
Query: 595 YGFPSPYWDDISEEAKELISHMLESNPDLRFSAE 628
Y P P + E +L+ +P+ R + E
Sbjct: 232 YRMPCP--PECPESLHDLMCQCWRKDPEERPTFE 263
>pdb|3DQW|A Chain A, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|B Chain B, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|C Chain C, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|D Chain D, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
Length = 286
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 57/214 (26%), Positives = 96/214 (44%), Gaps = 21/214 (9%)
Query: 424 NEVNILRSVNHPNIIKLLDEYDTNNE--LYLVIELIKGGDLFDAISKNVKFSEEDSKF-- 479
E +++ + H +++L Y +E +Y+VIE + G L D + + +
Sbjct: 62 QEAQVMKKLRHEKLVQL---YAVVSEEPIYIVIEYMSKGSLLDFLKGEMGKYLRLPQLVD 118
Query: 480 MTQSLASALSYLHDNYIVHRDIKPENLLVEMSGCHVKVLKVGDFGLAQRVLRPMFTV--- 536
M +AS ++Y+ VHRD++ N+LV + V KV DFGLA+ + T
Sbjct: 119 MAAQIASGMAYVERMNYVHRDLRAANILVGEN----LVCKVADFGLARLIEDNEXTARQG 174
Query: 537 CGTPT-YVAPEILNESGYGVKIDVWAAGVILYILLC-GFPPFVSDTNDQDELFDDILSGQ 594
P + APE + +K DVW+ G++L L G P+ N E+ D + G
Sbjct: 175 AKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVN--REVLDQVERG- 231
Query: 595 YGFPSPYWDDISEEAKELISHMLESNPDLRFSAE 628
Y P P + E +L+ +P+ R + E
Sbjct: 232 YRMPCP--PECPESLHDLMCQCWRKDPEERPTFE 263
>pdb|2OIQ|A Chain A, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|2OIQ|B Chain B, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|3D7T|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3DQX|A Chain A, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3DQX|B Chain B, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3EN4|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN4|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN5|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN5|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN6|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN6|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN7|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EN7|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EL7|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 3
pdb|3EL8|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3EL8|B Chain B, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3F6X|A Chain A, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|B Chain B, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|C Chain C, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|D Chain D, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3G6G|A Chain A, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|3G6G|B Chain B, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|4AGW|A Chain A, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|4AGW|B Chain B, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|3UQF|A Chain A, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQF|B Chain B, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQG|A Chain A, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|3UQG|B Chain B, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|4DGG|A Chain A, C-Src Kinase Domain In Complex With Rm-1-176
pdb|4DGG|B Chain B, C-Src Kinase Domain In Complex With Rm-1-176
Length = 286
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 56/214 (26%), Positives = 96/214 (44%), Gaps = 21/214 (9%)
Query: 424 NEVNILRSVNHPNIIKLLDEYDTNNE--LYLVIELIKGGDLFDAISKNVKFSEEDSKF-- 479
E +++ + H +++L Y +E +Y+V E + G L D + + +
Sbjct: 62 QEAQVMKKLRHEKLVQL---YAVVSEEPIYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVD 118
Query: 480 MTQSLASALSYLHDNYIVHRDIKPENLLVEMSGCHVKVLKVGDFGLAQRVLRPMFTV--- 536
M +AS ++Y+ VHRD++ N+LV + V KV DFGLA+ + +T
Sbjct: 119 MAAQIASGMAYVERMNYVHRDLRAANILVGEN----LVCKVADFGLARLIEDNEYTARQG 174
Query: 537 CGTPT-YVAPEILNESGYGVKIDVWAAGVILYILLC-GFPPFVSDTNDQDELFDDILSGQ 594
P + APE + +K DVW+ G++L L G P+ N E+ D + G
Sbjct: 175 AKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVN--REVLDQVERG- 231
Query: 595 YGFPSPYWDDISEEAKELISHMLESNPDLRFSAE 628
Y P P + E +L+ +P+ R + E
Sbjct: 232 YRMPCP--PECPESLHDLMCQCWRKDPEERPTFE 263
>pdb|2BDF|A Chain A, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDF|B Chain B, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDJ|A Chain A, Src Kinase In Complex With Inhibitor Ap23464
Length = 279
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 59/220 (26%), Positives = 98/220 (44%), Gaps = 33/220 (15%)
Query: 424 NEVNILRSVNHPNIIKLLDEYDTNNE--LYLVIELIKGGDLFDAISKNVKFSEEDSKF-- 479
E +++ + H +++L Y +E +Y+V E + G L D + E K+
Sbjct: 55 QEAQVMKKLRHEKLVQL---YAVVSEEPIYIVTEYMSKGSLLDFLKG------ETGKYLR 105
Query: 480 ------MTQSLASALSYLHDNYIVHRDIKPENLLVEMSGCHVKVLKVGDFGLAQRVLRPM 533
M +AS ++Y+ VHRD++ N+LV G ++ V KV DFGLA+ +
Sbjct: 106 LPQLVDMAAQIASGMAYVERMNYVHRDLRAANILV---GENL-VCKVADFGLARLIEDNE 161
Query: 534 FTV---CGTPT-YVAPEILNESGYGVKIDVWAAGVILYILLC-GFPPFVSDTNDQDELFD 588
+T P + APE + +K DVW+ G++L L G P+ N E+ D
Sbjct: 162 YTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVN--REVLD 219
Query: 589 DILSGQYGFPSPYWDDISEEAKELISHMLESNPDLRFSAE 628
+ G Y P P + E +L+ P+ R + E
Sbjct: 220 QVERG-YRMPCP--PECPESLHDLMCQCWRKEPEERPTFE 256
>pdb|3D7U|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|D Chain D, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 277
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 57/214 (26%), Positives = 98/214 (45%), Gaps = 21/214 (9%)
Query: 424 NEVNILRSVNHPNIIKLLDEYDTNNE--LYLVIELIKGGDLFDAISKNVKFSEEDSKF-- 479
E +++ + H +++L Y +E +Y+V E + G L D + + +
Sbjct: 53 QEAQVMKKLRHEKLVQL---YAVVSEEPIYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVD 109
Query: 480 MTQSLASALSYLHDNYIVHRDIKPENLLVEMSGCHVKVLKVGDFGLAQRVLRPMFTV--- 536
M +AS ++Y+ VHRD++ N+LV G ++ V KV DFGLA+ + +T
Sbjct: 110 MAAQIASGMAYVERMNYVHRDLRAANILV---GENL-VCKVADFGLARLIEDNEYTARQG 165
Query: 537 CGTPT-YVAPEILNESGYGVKIDVWAAGVILYILLC-GFPPFVSDTNDQDELFDDILSGQ 594
P + APE + +K DVW+ G++L L G P+ N E+ D + G
Sbjct: 166 AKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVN--REVLDQVERG- 222
Query: 595 YGFPSPYWDDISEEAKELISHMLESNPDLRFSAE 628
Y P P + E +L+ +P+ R + E
Sbjct: 223 YRMPCP--PECPESLHDLMCQCWRKDPEERPTFE 254
>pdb|2PZR|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZR|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 59/229 (25%), Positives = 107/229 (46%), Gaps = 34/229 (14%)
Query: 378 RYSVGQIIGDGNFAVVRQV------YDKHKD-MDCALKIIDKSKLLGKKQMIENEVNILR 430
+ ++G+ +G+G F V DK K+ + A+K++ + +E+ +++
Sbjct: 36 KLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMK 95
Query: 431 SVN-HPNIIKLLDEYDTNNELYLVIELIKGGDLFDAISK----NVKFS-------EEDSK 478
+ H NII LL + LY+++E G+L + + +++S EE
Sbjct: 96 MIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMT 155
Query: 479 F-----MTQSLASALSYLHDNYIVHRDIKPENLLVEMSGCHVKVLKVGDFGLAQRVLRPM 533
F T LA + YL +HRD+ N+LV + V+++ DFGLA+ +
Sbjct: 156 FKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVTEN----NVMRIADFGLARDINNID 211
Query: 534 F---TVCGT-PT-YVAPEILNESGYGVKIDVWAAGVILY-ILLCGFPPF 576
+ T G P ++APE L + Y + DVW+ GV+++ I G P+
Sbjct: 212 YYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPY 260
>pdb|2QQ7|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QQ7|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QI8|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|2QI8|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|3F3W|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3F3W|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3LOK|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
pdb|3LOK|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
Length = 286
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 56/214 (26%), Positives = 97/214 (45%), Gaps = 21/214 (9%)
Query: 424 NEVNILRSVNHPNIIKLLDEYDTNNE--LYLVIELIKGGDLFDAISKNVKFSEEDSKF-- 479
E +++ + H +++L Y +E +Y+V+E + G L D + + +
Sbjct: 62 QEAQVMKKLRHEKLVQL---YAVVSEEPIYIVMEYMSKGCLLDFLKGEMGKYLRLPQLVD 118
Query: 480 MTQSLASALSYLHDNYIVHRDIKPENLLVEMSGCHVKVLKVGDFGLAQRVLRPMFTV--- 536
M +AS ++Y+ VHRD++ N+LV + V KV DFGLA+ + +T
Sbjct: 119 MAAQIASGMAYVERMNYVHRDLRAANILVGEN----LVCKVADFGLARLIEDNEYTARQG 174
Query: 537 CGTPT-YVAPEILNESGYGVKIDVWAAGVILYILLC-GFPPFVSDTNDQDELFDDILSGQ 594
P + APE + +K DVW+ G++L L G P+ N E+ D + G
Sbjct: 175 AKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVN--REVLDQVERG- 231
Query: 595 YGFPSPYWDDISEEAKELISHMLESNPDLRFSAE 628
Y P P + E +L+ +P+ R + E
Sbjct: 232 YRMPCP--PECPESLHDLMCQCWRKDPEERPTFE 263
>pdb|3U4W|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc4b
pdb|3U51|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
pdb|3U51|B Chain B, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
Length = 275
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 57/214 (26%), Positives = 98/214 (45%), Gaps = 21/214 (9%)
Query: 424 NEVNILRSVNHPNIIKLLDEYDTNNE--LYLVIELIKGGDLFDAISKNVKFSEEDSKF-- 479
E +++ + H +++L Y +E +Y+V E + G L D + + +
Sbjct: 51 QEAQVMKKLRHEKLVQL---YAVVSEEPIYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVD 107
Query: 480 MTQSLASALSYLHDNYIVHRDIKPENLLVEMSGCHVKVLKVGDFGLAQRVLRPMFTV--- 536
M +AS ++Y+ VHRD++ N+LV G ++ V KV DFGLA+ + +T
Sbjct: 108 MAAQIASGMAYVERMNYVHRDLRAANILV---GENL-VCKVADFGLARLIEDNEYTARQG 163
Query: 537 CGTPT-YVAPEILNESGYGVKIDVWAAGVILYILLC-GFPPFVSDTNDQDELFDDILSGQ 594
P + APE + +K DVW+ G++L L G P+ N E+ D + G
Sbjct: 164 AKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVN--REVLDQVERG- 220
Query: 595 YGFPSPYWDDISEEAKELISHMLESNPDLRFSAE 628
Y P P + E +L+ +P+ R + E
Sbjct: 221 YRMPCP--PECPESLHDLMCQCWRKDPEERPTFE 252
>pdb|1KSW|A Chain A, Structure Of Human C-Src Tyrosine Kinase (Thr338gly
Mutant) In Complex With N6-Benzyl Adp
Length = 452
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 56/216 (25%), Positives = 93/216 (43%), Gaps = 33/216 (15%)
Query: 424 NEVNILRSVNHPNIIKLLDEYDTNNE--LYLVIELIKGGDLFDAISKNVKFSEEDSKF-- 479
E +++ + H +++L Y +E +Y+V E + G L D + E K+
Sbjct: 228 QEAQVMKKLRHEKLVQL---YAVVSEEPIYIVGEYMSKGSLLDFLKG------ETGKYLR 278
Query: 480 ------MTQSLASALSYLHDNYIVHRDIKPENLLVEMSGCHVKVLKVGDFGLAQRVLRPM 533
M +AS ++Y+ VHRD++ N+LV + V KV DFGLA+ +
Sbjct: 279 LPQLVDMAAQIASGMAYVERMNYVHRDLRAANILVGEN----LVCKVADFGLARLIEDNE 334
Query: 534 FTVCGTP----TYVAPEILNESGYGVKIDVWAAGVILYILLC-GFPPFVSDTNDQDELFD 588
+T + APE + +K DVW+ G++L L G P+ N E+ D
Sbjct: 335 YTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVN--REVLD 392
Query: 589 DILSGQYGFPSPYWDDISEEAKELISHMLESNPDLR 624
+ G Y P P + E +L+ P+ R
Sbjct: 393 QVERG-YRMPCP--PECPESLHDLMCQCWRKEPEER 425
>pdb|2HWO|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWO|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWP|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2HWP|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2QLQ|A Chain A, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|2QLQ|B Chain B, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|3F3T|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3T|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3U|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3U|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3V|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3F3V|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3G5D|A Chain A, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3G5D|B Chain B, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3TZ7|A Chain A, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ7|B Chain B, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ8|A Chain A, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ8|B Chain B, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ9|A Chain A, Kinase Domain Of Csrc In Complex With Rl130
pdb|3TZ9|B Chain B, Kinase Domain Of Csrc In Complex With Rl130
Length = 286
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 56/214 (26%), Positives = 96/214 (44%), Gaps = 21/214 (9%)
Query: 424 NEVNILRSVNHPNIIKLLDEYDTNNE--LYLVIELIKGGDLFDAISKNVKFSEEDSKF-- 479
E +++ + H +++L Y +E +Y+V E + G L D + + +
Sbjct: 62 QEAQVMKKLRHEKLVQL---YAVVSEEPIYIVTEYMSKGCLLDFLKGEMGKYLRLPQLVD 118
Query: 480 MTQSLASALSYLHDNYIVHRDIKPENLLVEMSGCHVKVLKVGDFGLAQRVLRPMFTV--- 536
M +AS ++Y+ VHRD++ N+LV + V KV DFGLA+ + +T
Sbjct: 119 MAAQIASGMAYVERMNYVHRDLRAANILVGEN----LVCKVADFGLARLIEDNEYTARQG 174
Query: 537 CGTPT-YVAPEILNESGYGVKIDVWAAGVILYILLC-GFPPFVSDTNDQDELFDDILSGQ 594
P + APE + +K DVW+ G++L L G P+ N E+ D + G
Sbjct: 175 AKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVN--REVLDQVERG- 231
Query: 595 YGFPSPYWDDISEEAKELISHMLESNPDLRFSAE 628
Y P P + E +L+ +P+ R + E
Sbjct: 232 YRMPCP--PECPESLHDLMCQCWRKDPEERPTFE 263
>pdb|3GEQ|A Chain A, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
pdb|3GEQ|B Chain B, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
Length = 286
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 56/214 (26%), Positives = 95/214 (44%), Gaps = 21/214 (9%)
Query: 424 NEVNILRSVNHPNIIKLLDEYDTNNE--LYLVIELIKGGDLFDAISKNVKFSEEDSKF-- 479
E +++ + H +++L Y +E +Y+V E + G L D + + +
Sbjct: 62 QEAQVMKKLRHEKLVQL---YAVVSEEPIYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVD 118
Query: 480 MTQSLASALSYLHDNYIVHRDIKPENLLVEMSGCHVKVLKVGDFGLAQRVLRPMFTV--- 536
M +AS ++Y+ VHRD+ N+LV + V KV DFGLA+ + +T
Sbjct: 119 MAAQIASGMAYVERMNYVHRDLAAANILVGEN----LVCKVADFGLARLIEDNEYTARQG 174
Query: 537 CGTPT-YVAPEILNESGYGVKIDVWAAGVILYILLC-GFPPFVSDTNDQDELFDDILSGQ 594
P + APE + +K DVW+ G++L L G P+ N E+ D + G
Sbjct: 175 AKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVN--REVLDQVERG- 231
Query: 595 YGFPSPYWDDISEEAKELISHMLESNPDLRFSAE 628
Y P P + E +L+ +P+ R + E
Sbjct: 232 YRMPCP--PECPESLHDLMCQCWRKDPEERPTFE 263
>pdb|4FL3|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
Length = 635
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 49/204 (24%), Positives = 95/204 (46%), Gaps = 38/204 (18%)
Query: 385 IGDGNFAVVRQVYD--------------KHKDMDCALKIIDKSKLLGKKQMIENEVNILR 430
+G GNF V++ Y K++ D ALK +LL E N+++
Sbjct: 377 LGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALK----DELLA-------EANVMQ 425
Query: 431 SVNHPNIIKLLDEYDTNNELYLVIELIKGGDLFDAISKNVKFSEEDSKFMTQSLASALSY 490
+++P I++++ + + + LV+E+ + G L + +N +++ + ++ + Y
Sbjct: 426 QLDNPYIVRMIGICEAESWM-LVMEMAELGPLNKYLQQNRHVKDKNIIELVHQVSMGMKY 484
Query: 491 LHDNYIVHRDIKPENLLVEMSGCHVKVLKVGDFGLAQRVLRPMFTVCGTPT-------YV 543
L ++ VHRD+ N+L+ K+ DFGL+ + LR T +
Sbjct: 485 LEESNFVHRDLAARNVLLVTQ----HYAKISDFGLS-KALRADENYYKAQTHGKWPVKWY 539
Query: 544 APEILNESGYGVKIDVWAAGVILY 567
APE +N + K DVW+ GV+++
Sbjct: 540 APECINYYKFSSKSDVWSFGVLMW 563
>pdb|2Q0B|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
pdb|2Q0B|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 59/229 (25%), Positives = 106/229 (46%), Gaps = 34/229 (14%)
Query: 378 RYSVGQIIGDGNFAVVRQV------YDKHKD-MDCALKIIDKSKLLGKKQMIENEVNILR 430
+ ++G+ +G+G F V DK K+ + A+K++ + +E+ +++
Sbjct: 36 KLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMK 95
Query: 431 SVN-HPNIIKLLDEYDTNNELYLVIELIKGGDLFDAISK----NVKFS-------EEDSK 478
+ H NII LL + LY+++ G+L + + +++S EE
Sbjct: 96 MIGKHKNIINLLGACTQDGPLYVIVAYASKGNLREYLRARRPPGMEYSYDINRVPEEQMT 155
Query: 479 F-----MTQSLASALSYLHDNYIVHRDIKPENLLVEMSGCHVKVLKVGDFGLAQRVLRPM 533
F T LA + YL +HRD+ N+LV + V+K+ DFGLA+ +
Sbjct: 156 FKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVTEN----NVMKIADFGLARDINNID 211
Query: 534 F---TVCGT-PT-YVAPEILNESGYGVKIDVWAAGVILY-ILLCGFPPF 576
+ T G P ++APE L + Y + DVW+ GV+++ I G P+
Sbjct: 212 YYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPY 260
>pdb|2PTK|A Chain A, Chicken Src Tyrosine Kinase
Length = 453
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 54/214 (25%), Positives = 94/214 (43%), Gaps = 21/214 (9%)
Query: 424 NEVNILRSVNHPNIIKLLDEYDTNNE--LYLVIELIKGGDLFDAISKNVKFSEEDSKF-- 479
E +++ + H +++L Y +E +Y+V E + G L D + + +
Sbjct: 229 QEAQVMKKLRHEKLVQL---YAVVSEEPIYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVD 285
Query: 480 MTQSLASALSYLHDNYIVHRDIKPENLLVEMSGCHVKVLKVGDFGLAQRVLRPMFTVCGT 539
M +AS ++Y+ VHRD++ N+LV + V KV DFGL + + +T
Sbjct: 286 MAAQIASGMAYVERMNYVHRDLRAANILVGEN----LVCKVADFGLGRLIEDNEYTARQG 341
Query: 540 P----TYVAPEILNESGYGVKIDVWAAGVILYILLC-GFPPFVSDTNDQDELFDDILSGQ 594
+ APE + +K DVW+ G++L L G P+ N E+ D + G
Sbjct: 342 AKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVN--REVLDQVERG- 398
Query: 595 YGFPSPYWDDISEEAKELISHMLESNPDLRFSAE 628
Y P P + E +L+ +P+ R + E
Sbjct: 399 YRMPCP--PECPESLHDLMCQCWRKDPEERPTFE 430
>pdb|2OH4|A Chain A, Crystal Structure Of Vegfr2 With A Benzimidazole-Urea
Inhibitor
Length = 316
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 61/242 (25%), Positives = 112/242 (46%), Gaps = 32/242 (13%)
Query: 366 RENLNIPSKLLQRYSVGQIIGDGNFAVVRQVYDKHKDMDCALKIIDKSKLLGKKQMIENE 425
R+ LN+ K L R + GQ+I F + + + A+K++ + + + + +E
Sbjct: 27 RDRLNL-GKPLGRGAFGQVIEADAFGIDKTATCR----TVAVKMLKEGATHSEHRALMSE 81
Query: 426 VNILRSVNHP-NIIKLLDE-YDTNNELYLVIELIKGGDLFDAI-SKNVKF----SEED-- 476
+ IL + H N++ LL L +++E K G+L + SK +F + ED
Sbjct: 82 LKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKTPEDLY 141
Query: 477 SKFMTQ--------SLASALSYLHDNYIVHRDIKPENLLVEMSGCHVKVLKVGDFGLAQR 528
F+T +A + +L +HRD+ N+L+ V+K+ DFGLA+
Sbjct: 142 KDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEK----NVVKICDFGLARD 197
Query: 529 VLR-PMFTVCGTP----TYVAPEILNESGYGVKIDVWAAGVILY-ILLCGFPPFVSDTND 582
+ + P G ++APE + + Y ++ DVW+ GV+L+ I G P+ D
Sbjct: 198 IXKDPDXVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKID 257
Query: 583 QD 584
++
Sbjct: 258 EE 259
>pdb|4FL2|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
Length = 636
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 49/204 (24%), Positives = 95/204 (46%), Gaps = 38/204 (18%)
Query: 385 IGDGNFAVVRQVYD--------------KHKDMDCALKIIDKSKLLGKKQMIENEVNILR 430
+G GNF V++ Y K++ D ALK +LL E N+++
Sbjct: 378 LGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALK----DELLA-------EANVMQ 426
Query: 431 SVNHPNIIKLLDEYDTNNELYLVIELIKGGDLFDAISKNVKFSEEDSKFMTQSLASALSY 490
+++P I++++ + + + LV+E+ + G L + +N +++ + ++ + Y
Sbjct: 427 QLDNPYIVRMIGICEAESWM-LVMEMAELGPLNKYLQQNRHVKDKNIIELVHQVSMGMKY 485
Query: 491 LHDNYIVHRDIKPENLLVEMSGCHVKVLKVGDFGLAQRVLRPMFTVCGTPT-------YV 543
L ++ VHRD+ N+L+ K+ DFGL+ + LR T +
Sbjct: 486 LEESNFVHRDLAARNVLLVTQ----HYAKISDFGLS-KALRADENYYKAQTHGKWPVKWY 540
Query: 544 APEILNESGYGVKIDVWAAGVILY 567
APE +N + K DVW+ GV+++
Sbjct: 541 APECINYYKFSSKSDVWSFGVLMW 564
>pdb|2XIR|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Pf-00337210 (N,2-Dimethyl-6-(7-(2-Morpholinoethoxy)
Quinolin-4-Yloxy)benzofuran-3-Carboxamide)
pdb|4AG8|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Axitinib (Ag-013736)
(N-Methyl-2-(3-((E)-2-Pyridin-2-
Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-Benzamide)
Length = 316
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 57/236 (24%), Positives = 106/236 (44%), Gaps = 33/236 (13%)
Query: 378 RYSVGQIIGDGNFAVVRQV--YDKHKDMDC---ALKIIDKSKLLGKKQMIENEVNILRSV 432
R +G+ +G G F V + + K C A+K++ + + + + +E+ IL +
Sbjct: 28 RLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHI 87
Query: 433 NHP-NIIKLLDE-YDTNNELYLVIELIKGGDLFDAISKN------VKFSEED--SKFMTQ 482
H N++ LL L +++E K G+L + K + ED F+T
Sbjct: 88 GHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTL 147
Query: 483 --------SLASALSYLHDNYIVHRDIKPENLLVEMSGCHVKVLKVGDFGLAQRVLR-PM 533
+A + +L +HRD+ N+L+ V+K+ DFGLA+ + + P
Sbjct: 148 EHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEK----NVVKICDFGLARDIYKDPD 203
Query: 534 FTVCGTP----TYVAPEILNESGYGVKIDVWAAGVILY-ILLCGFPPFVSDTNDQD 584
+ G ++APE + + Y ++ DVW+ GV+L+ I G P+ D++
Sbjct: 204 YVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEE 259
>pdb|1LUF|A Chain A, Crystal Structure Of The Musk Tyrosine Kinase: Insights
Into Receptor Autoregulation
Length = 343
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 55/236 (23%), Positives = 101/236 (42%), Gaps = 43/236 (18%)
Query: 385 IGDGNFAVVRQV-------YDKHKDMDCALKIIDKSKLLGKKQMIENEVNILRSVNHPNI 437
IG+G F V Q Y+ + A+K++ + + + E ++ ++PNI
Sbjct: 55 IGEGAFGRVFQARAPGLLPYEPFTMV--AVKMLKEEASADMQADFQREAALMAEFDNPNI 112
Query: 438 IKLLDEYDTNNELYLVIELIKGGDL---FDAISKNVKFSEEDSKFMTQS----------- 483
+KLL + L+ E + GDL ++S + S S T++
Sbjct: 113 VKLLGVCAVGKPMCLLFEYMAYGDLNEFLRSMSPHTVCSLSHSDLSTRARVSSPGPPPLS 172
Query: 484 ----------LASALSYLHDNYIVHRDIKPENLLVEMSGCHVKVLKVGDFGLAQRVLRPM 533
+A+ ++YL + VHRD+ N LV + V+K+ DFGL++ +
Sbjct: 173 CAEQLCIARQVAAGMAYLSERKFVHRDLATRNCLVGEN----MVVKIADFGLSRNIYSAD 228
Query: 534 FTVC----GTPT-YVAPEILNESGYGVKIDVWAAGVILY-ILLCGFPPFVSDTNDQ 583
+ P ++ PE + + Y + DVWA GV+L+ I G P+ +++
Sbjct: 229 YYKADGNDAIPIRWMPPESIFYNRYTTESDVWAYGVVLWEIFSYGLQPYYGMAHEE 284
>pdb|4AGC|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Axitinib (Ag-013736)
(N-Methyl-2-(
3-((E)-2-Pyridin-2-Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-
Benzamide)
pdb|4AGD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sunitinib (Su11248) (N-2-
Diethylaminoethyl)-5-((Z)-(5-Fluoro-2-Oxo-1h-Indol-3-
Ylidene)methyl)-2,4-Dimethyl-1h-Pyrrole-3-Carboxamide)
pdb|4ASD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sorafenib (Bay 43-9006)
pdb|4ASE|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Tivozanib (Av-951)
Length = 353
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 57/236 (24%), Positives = 106/236 (44%), Gaps = 33/236 (13%)
Query: 378 RYSVGQIIGDGNFAVVRQV--YDKHKDMDC---ALKIIDKSKLLGKKQMIENEVNILRSV 432
R +G+ +G G F V + + K C A+K++ + + + + +E+ IL +
Sbjct: 65 RLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHI 124
Query: 433 NHP-NIIKLLDE-YDTNNELYLVIELIKGGDLFDAISKN------VKFSEED--SKFMTQ 482
H N++ LL L +++E K G+L + K + ED F+T
Sbjct: 125 GHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTL 184
Query: 483 --------SLASALSYLHDNYIVHRDIKPENLLVEMSGCHVKVLKVGDFGLAQRVLR-PM 533
+A + +L +HRD+ N+L+ V+K+ DFGLA+ + + P
Sbjct: 185 EHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEK----NVVKICDFGLARDIYKDPD 240
Query: 534 FTVCGTP----TYVAPEILNESGYGVKIDVWAAGVILY-ILLCGFPPFVSDTNDQD 584
+ G ++APE + + Y ++ DVW+ GV+L+ I G P+ D++
Sbjct: 241 YVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEE 296
>pdb|3VNT|A Chain A, Crystal Structure Of The Kinase Domain Of Human Vegfr2
With A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 318
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 59/236 (25%), Positives = 109/236 (46%), Gaps = 33/236 (13%)
Query: 378 RYSVGQIIGDGNFAVVRQV--YDKHKDMDC---ALKIIDKSKLLGKKQMIENEVNILRSV 432
R +G+ +G G F V + + K C A+K++ + + + + +E+ IL +
Sbjct: 30 RLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHI 89
Query: 433 NHP-NIIKLLDE-YDTNNELYLVIELIKGGDLFDAI-SKNVKF-----SEED--SKFMTQ 482
H N++ LL L +++E K G+L + SK +F + ED F+T
Sbjct: 90 GHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKEAPEDLYKDFLTL 149
Query: 483 --------SLASALSYLHDNYIVHRDIKPENLLVEMSGCHVKVLKVGDFGLAQRVLR-PM 533
+A + +L +HRD+ N+L+ V+K+ DFGLA+ + + P
Sbjct: 150 EHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEK----NVVKICDFGLARDIYKDPD 205
Query: 534 FTVCGTP----TYVAPEILNESGYGVKIDVWAAGVILY-ILLCGFPPFVSDTNDQD 584
+ G ++APE + + Y ++ DVW+ GV+L+ I G P+ D++
Sbjct: 206 YVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEE 261
>pdb|2PY3|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
pdb|2PY3|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 57.0 bits (136), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 59/229 (25%), Positives = 106/229 (46%), Gaps = 34/229 (14%)
Query: 378 RYSVGQIIGDGNFAVVRQV------YDKHKD-MDCALKIIDKSKLLGKKQMIENEVNILR 430
+ ++G+ +G+G F V DK K+ + A+K++ + +E+ +++
Sbjct: 36 KLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMK 95
Query: 431 SVN-HPNIIKLLDEYDTNNELYLVIELIKGGDLFDAISK----NVKFS-------EEDSK 478
+ H NII LL + LY+++ G+L + + +++S EE
Sbjct: 96 MIGKHKNIINLLGACTQDGPLYVIVGYASKGNLREYLRARRPPGMEYSYDINRVPEEQMT 155
Query: 479 F-----MTQSLASALSYLHDNYIVHRDIKPENLLVEMSGCHVKVLKVGDFGLAQRVLRPM 533
F T LA + YL +HRD+ N+LV + V+K+ DFGLA+ +
Sbjct: 156 FKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVTEN----NVMKIADFGLARDINNID 211
Query: 534 F---TVCGT-PT-YVAPEILNESGYGVKIDVWAAGVILY-ILLCGFPPF 576
+ T G P ++APE L + Y + DVW+ GV+++ I G P+
Sbjct: 212 YYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPY 260
>pdb|3C4F|A Chain A, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
pdb|3C4F|B Chain B, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
Length = 302
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 57/229 (24%), Positives = 99/229 (43%), Gaps = 34/229 (14%)
Query: 378 RYSVGQIIGDGNFAVVRQVYDKHKDMDCALKIIDKSKLLGKKQMIE-------NEVNILR 430
R +G+ +G+G F V D D ++ + + K E +E+ +++
Sbjct: 14 RLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMK 73
Query: 431 SVN-HPNIIKLLDEYDTNNELYLVIELIKGGDLFDAI----------------SKNVKFS 473
+ H NII LL + LY+++E G+L + + + + S
Sbjct: 74 MIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYCYNPSHNPEEQLS 133
Query: 474 EEDSKFMTQSLASALSYLHDNYIVHRDIKPENLLVEMSGCHVKVLKVGDFGLAQRVLRPM 533
+D +A + YL +HRD+ N+LV V+K+ DFGLA+ +
Sbjct: 134 SKDLVSCAYQVARGMEYLASKKCIHRDLAARNVLVTEDN----VMKIADFGLARDIHHID 189
Query: 534 F---TVCGT-PT-YVAPEILNESGYGVKIDVWAAGVILY-ILLCGFPPF 576
+ T G P ++APE L + Y + DVW+ GV+L+ I G P+
Sbjct: 190 YYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPY 238
>pdb|3RHX|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
pdb|3RHX|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
Length = 306
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 57/229 (24%), Positives = 99/229 (43%), Gaps = 34/229 (14%)
Query: 378 RYSVGQIIGDGNFAVVRQVYDKHKDMDCALKIIDKSKLLGKKQMIE-------NEVNILR 430
R +G+ +G+G F V D D ++ + + K E +E+ +++
Sbjct: 18 RLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMK 77
Query: 431 SVN-HPNIIKLLDEYDTNNELYLVIELIKGGDLFDAI----------------SKNVKFS 473
+ H NII LL + LY+++E G+L + + + + S
Sbjct: 78 MIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLS 137
Query: 474 EEDSKFMTQSLASALSYLHDNYIVHRDIKPENLLVEMSGCHVKVLKVGDFGLAQRVLRPM 533
+D +A + YL +HRD+ N+LV V+K+ DFGLA+ +
Sbjct: 138 SKDLVSCAYQVARGMEYLASKKCIHRDLAARNVLVTED----NVMKIADFGLARDIHHID 193
Query: 534 F---TVCGT-PT-YVAPEILNESGYGVKIDVWAAGVILY-ILLCGFPPF 576
+ T G P ++APE L + Y + DVW+ GV+L+ I G P+
Sbjct: 194 YYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPY 242
>pdb|4F63|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F63|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F64|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F64|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F65|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
pdb|4F65|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
Length = 309
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 57/229 (24%), Positives = 98/229 (42%), Gaps = 34/229 (14%)
Query: 378 RYSVGQIIGDGNFAVVRQVYDKHKDMDCALKIIDKSKLLGKKQMIE-------NEVNILR 430
R +G+ +G+G F V D D ++ + + K E +E+ +++
Sbjct: 21 RLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMK 80
Query: 431 SVN-HPNIIKLLDEYDTNNELYLVIELIKGGDLFDAISK----------------NVKFS 473
+ H NII LL + LY+++E G+L + + + S
Sbjct: 81 MIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLS 140
Query: 474 EEDSKFMTQSLASALSYLHDNYIVHRDIKPENLLVEMSGCHVKVLKVGDFGLAQRVLRPM 533
+D +A + YL +HRD+ N+LV V+K+ DFGLA+ +
Sbjct: 141 SKDLVSCAYQVARGMEYLASKKCIHRDLAARNVLVTED----NVMKIADFGLARDIHHID 196
Query: 534 F---TVCGT-PT-YVAPEILNESGYGVKIDVWAAGVILY-ILLCGFPPF 576
+ T G P ++APE L + Y + DVW+ GV+L+ I G P+
Sbjct: 197 YYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPY 245
>pdb|3C7Q|A Chain A, Structure Of Vegfr2 Kinase Domain In Complex With Bibf1120
Length = 316
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 58/241 (24%), Positives = 108/241 (44%), Gaps = 31/241 (12%)
Query: 366 RENLNIPSKLLQRYSVGQIIGDGNFAVVRQVYDKHKDMDCALKIIDKSKLLGKKQMIENE 425
R+ L + K L R + GQ+I F + + + A+K++ + + + + +E
Sbjct: 28 RDRLKL-GKPLGRGAFGQVIEADAFGIDKTATXR----TVAVKMLKEGATHSEHRALMSE 82
Query: 426 VNILRSVNHP-NIIKLLDE-YDTNNELYLVIELIKGGDLFDAISKN----VKFSEED--S 477
+ IL + H N++ LL L +++E K G+L + V + ED
Sbjct: 83 LKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKPEDLYK 142
Query: 478 KFMTQ--------SLASALSYLHDNYIVHRDIKPENLLVEMSGCHVKVLKVGDFGLAQRV 529
F+T +A + +L +HRD+ N+L+ V+K+ DFGLA+ +
Sbjct: 143 DFLTLEHLIXYSFQVAKGMEFLASRKXIHRDLAARNILLSEK----NVVKICDFGLARDI 198
Query: 530 LR-PMFTVCGTP----TYVAPEILNESGYGVKIDVWAAGVILY-ILLCGFPPFVSDTNDQ 583
+ P G ++APE + + Y ++ DVW+ GV+L+ I G P+ D+
Sbjct: 199 XKDPDXVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDE 258
Query: 584 D 584
+
Sbjct: 259 E 259
>pdb|3JS2|A Chain A, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3JS2|B Chain B, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3KY2|A Chain A, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
pdb|3KY2|B Chain B, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
Length = 317
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 57/229 (24%), Positives = 99/229 (43%), Gaps = 34/229 (14%)
Query: 378 RYSVGQIIGDGNFAVVRQVYDKHKDMDCALKIIDKSKLLGKKQMIE-------NEVNILR 430
R +G+ +G+G F V D D ++ + + K E +E+ +++
Sbjct: 29 RLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMK 88
Query: 431 SVN-HPNIIKLLDEYDTNNELYLVIELIKGGDLFDAI----------------SKNVKFS 473
+ H NII LL + LY+++E G+L + + + + S
Sbjct: 89 MIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLS 148
Query: 474 EEDSKFMTQSLASALSYLHDNYIVHRDIKPENLLVEMSGCHVKVLKVGDFGLAQRVLRPM 533
+D +A + YL +HRD+ N+LV V+K+ DFGLA+ +
Sbjct: 149 SKDLVSCAYQVARGMEYLASKKCIHRDLAARNVLVTED----NVMKIADFGLARDIHHID 204
Query: 534 F---TVCGT-PT-YVAPEILNESGYGVKIDVWAAGVILY-ILLCGFPPF 576
+ T G P ++APE L + Y + DVW+ GV+L+ I G P+
Sbjct: 205 YYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPY 253
>pdb|3GQI|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 56/229 (24%), Positives = 99/229 (43%), Gaps = 34/229 (14%)
Query: 378 RYSVGQIIGDGNFA--VVRQVYDKHKD-----MDCALKIIDKSKLLGKKQMIENEVNILR 430
R +G+ +G+G F V+ + KD A+K++ + +E+ +++
Sbjct: 29 RLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMK 88
Query: 431 SVN-HPNIIKLLDEYDTNNELYLVIELIKGGDLFDAI----------------SKNVKFS 473
+ H NII LL + LY+++E G+L + + + + S
Sbjct: 89 MIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEFSFNPSHNPEEQLS 148
Query: 474 EEDSKFMTQSLASALSYLHDNYIVHRDIKPENLLVEMSGCHVKVLKVGDFGLAQRV---- 529
+D +A + YL +HRD+ N+LV V+K+ DFGLA+ +
Sbjct: 149 SKDLVSCAYQVARGMEYLASKKCIHRDLAARNVLV----TEDNVMKIADFGLARDIHHID 204
Query: 530 LRPMFTVCGTPT-YVAPEILNESGYGVKIDVWAAGVILY-ILLCGFPPF 576
T P ++APE L + Y + DVW+ GV+L+ I G P+
Sbjct: 205 XXKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPY 253
>pdb|3EMG|A Chain A, Discovery And Sar Of Novel 4-Thiazolyl-2-
Phenylaminopyrimidines As Potent Inhibitors Of Spleen
Tyrosine Kinase (Syk)
Length = 291
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 49/204 (24%), Positives = 95/204 (46%), Gaps = 38/204 (18%)
Query: 385 IGDGNFAVVRQVYD--------------KHKDMDCALKIIDKSKLLGKKQMIENEVNILR 430
+G GNF V++ Y K++ D ALK +LL E N+++
Sbjct: 33 LGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALK----DELLA-------EANVMQ 81
Query: 431 SVNHPNIIKLLDEYDTNNELYLVIELIKGGDLFDAISKNVKFSEEDSKFMTQSLASALSY 490
+++P I++++ + + + LV+E+ + G L + +N +++ + ++ + Y
Sbjct: 82 QLDNPYIVRMIGICEAESWM-LVMEMAELGPLNKYLQQNRHVKDKNIIELVHQVSMGMKY 140
Query: 491 LHDNYIVHRDIKPENLLVEMSGCHVKVLKVGDFGLAQRVLRPMFTVCGTPT-------YV 543
L ++ VHRD+ N+L+ K+ DFGL+ + LR T +
Sbjct: 141 LEESNFVHRDLAARNVLLVTQ----HYAKISDFGLS-KALRADENYYKAQTHGKWPVKWY 195
Query: 544 APEILNESGYGVKIDVWAAGVILY 567
APE +N + K DVW+ GV+++
Sbjct: 196 APECINYYKFSSKSDVWSFGVLMW 219
>pdb|1FGK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGK|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1AGW|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|1AGW|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|2FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
pdb|2FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
Length = 310
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 57/229 (24%), Positives = 98/229 (42%), Gaps = 34/229 (14%)
Query: 378 RYSVGQIIGDGNFAVVRQVYDKHKDMDCALKIIDKSKLLGKKQMIE-------NEVNILR 430
R +G+ +G+G F V D D ++ + + K E +E+ +++
Sbjct: 22 RLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMK 81
Query: 431 SVN-HPNIIKLLDEYDTNNELYLVIELIKGGDLFDAISK----------------NVKFS 473
+ H NII LL + LY+++E G+L + + + S
Sbjct: 82 MIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLS 141
Query: 474 EEDSKFMTQSLASALSYLHDNYIVHRDIKPENLLVEMSGCHVKVLKVGDFGLAQRVLRPM 533
+D +A + YL +HRD+ N+LV V+K+ DFGLA+ +
Sbjct: 142 SKDLVSCAYQVARGMEYLASKKCIHRDLAARNVLVTED----NVMKIADFGLARDIHHID 197
Query: 534 F---TVCGT-PT-YVAPEILNESGYGVKIDVWAAGVILY-ILLCGFPPF 576
+ T G P ++APE L + Y + DVW+ GV+L+ I G P+
Sbjct: 198 YYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPY 246
>pdb|3KXX|A Chain A, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|B Chain B, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|C Chain C, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|D Chain D, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
Length = 317
Score = 56.6 bits (135), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 57/229 (24%), Positives = 100/229 (43%), Gaps = 34/229 (14%)
Query: 378 RYSVGQIIGDGNFA--VVRQVYDKHKD-----MDCALKIIDKSKLLGKKQMIENEVNILR 430
R +G+ +G+G F V+ + KD A+K++ + +E+ +++
Sbjct: 29 RLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMK 88
Query: 431 SVN-HPNIIKLLDEYDTNNELYLVIELIKGGDLFDAISK----------------NVKFS 473
+ H NII LL + LY+++E G+L + + + S
Sbjct: 89 MIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQAREPPGLEYSYNPSHNPEEQLS 148
Query: 474 EEDSKFMTQSLASALSYLHDNYIVHRDIKPENLLVEMSGCHVKVLKVGDFGLAQRVLRPM 533
+D +A + YL +HRD+ N+LV V+K+ DFGLA+ +
Sbjct: 149 SKDLVSCAYQVARGMEYLASKKCIHRDLAARNVLV----TEDNVMKIADFGLARDIHHID 204
Query: 534 F---TVCGT-PT-YVAPEILNESGYGVKIDVWAAGVILY-ILLCGFPPF 576
+ T G P ++APE L + Y + DVW+ GV+L+ I G P+
Sbjct: 205 YYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPY 253
>pdb|3TUB|A Chain A, Crystal Structure Of Syk Kinase Domain With 1-(5-(6,7-
Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-3-((1r,2s)-2-
Phenylcyclopropyl)urea
Length = 293
Score = 56.6 bits (135), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 49/204 (24%), Positives = 95/204 (46%), Gaps = 38/204 (18%)
Query: 385 IGDGNFAVVRQVYD--------------KHKDMDCALKIIDKSKLLGKKQMIENEVNILR 430
+G GNF V++ Y K++ D ALK +LL E N+++
Sbjct: 35 LGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALK----DELLA-------EANVMQ 83
Query: 431 SVNHPNIIKLLDEYDTNNELYLVIELIKGGDLFDAISKNVKFSEEDSKFMTQSLASALSY 490
+++P I++++ + + + LV+E+ + G L + +N +++ + ++ + Y
Sbjct: 84 QLDNPYIVRMIGICEAESWM-LVMEMAELGPLNKYLQQNRHVKDKNIIELVHQVSMGMKY 142
Query: 491 LHDNYIVHRDIKPENLLVEMSGCHVKVLKVGDFGLAQRVLRPMFTVCGTPT-------YV 543
L ++ VHRD+ N+L+ K+ DFGL+ + LR T +
Sbjct: 143 LEESNFVHRDLAARNVLLVTQ----HYAKISDFGLS-KALRADENYYKAQTHGKWPVKWY 197
Query: 544 APEILNESGYGVKIDVWAAGVILY 567
APE +N + K DVW+ GV+++
Sbjct: 198 APECINYYKFSSKSDVWSFGVLMW 221
>pdb|3VF8|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic
Domain With Pyrazolylbenzimidazole Inhibitor 416
pdb|3VF9|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic
Domain With Thienopyrazolylindole Inhibitor 027
pdb|3TUC|A Chain A, Crystal Structure Of Syk Kinase Domain With
1-Benzyl-N-(5-(6,7-
Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-2-Oxo-1,
2-Dihydropyridine-3- Carboxamide
pdb|3TUD|A Chain A, Crystal Structure Of Syk Kinase Domain With
N-(4-Methyl-3-(8-Methyl-7-
Oxo-2-(Phenylamino)-7,8-Dihydropyrido[2,
3-D]pyrimidin-6-Yl)phenyl)-3- (Trifluoromethyl)benzamide
Length = 299
Score = 56.6 bits (135), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 49/204 (24%), Positives = 95/204 (46%), Gaps = 38/204 (18%)
Query: 385 IGDGNFAVVRQVYD--------------KHKDMDCALKIIDKSKLLGKKQMIENEVNILR 430
+G GNF V++ Y K++ D ALK +LL E N+++
Sbjct: 35 LGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALK----DELLA-------EANVMQ 83
Query: 431 SVNHPNIIKLLDEYDTNNELYLVIELIKGGDLFDAISKNVKFSEEDSKFMTQSLASALSY 490
+++P I++++ + + + LV+E+ + G L + +N +++ + ++ + Y
Sbjct: 84 QLDNPYIVRMIGICEAESWM-LVMEMAELGPLNKYLQQNRHVKDKNIIELVHQVSMGMKY 142
Query: 491 LHDNYIVHRDIKPENLLVEMSGCHVKVLKVGDFGLAQRVLRPMFTVCGTPT-------YV 543
L ++ VHRD+ N+L+ K+ DFGL+ + LR T +
Sbjct: 143 LEESNFVHRDLAARNVLLVTQ----HYAKISDFGLS-KALRADENYYKAQTHGKWPVKWY 197
Query: 544 APEILNESGYGVKIDVWAAGVILY 567
APE +N + K DVW+ GV+++
Sbjct: 198 APECINYYKFSSKSDVWSFGVLMW 221
>pdb|4F99|A Chain A, Human Cdc7 Kinase In Complex With Dbf4 And Nucleotide
pdb|4F9A|A Chain A, Human Cdc7 Kinase In Complex With Dbf4 And Nucleotide
pdb|4F9A|C Chain C, Human Cdc7 Kinase In Complex With Dbf4 And Nucleotide
pdb|4F9B|A Chain A, Human Cdc7 Kinase In Complex With Dbf4 And Pha767491
pdb|4F9B|C Chain C, Human Cdc7 Kinase In Complex With Dbf4 And Pha767491
pdb|4F9C|A Chain A, Human Cdc7 Kinase In Complex With Dbf4 And Xl413
Length = 361
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 42/132 (31%), Positives = 57/132 (43%), Gaps = 35/132 (26%)
Query: 483 SLASALSYLHDNYIVHRDIKPENLLVEMSGCHVKVLKVGDFGLAQ--------------- 527
+L AL +H IVHRD+KP N L +K + DFGLAQ
Sbjct: 125 NLFKALKRIHQFGIVHRDVKPSNFLYNR---RLKKYALVDFGLAQGTHDTKIELLKFVQS 181
Query: 528 -----RVLRPMFTVC-----------GTPTYVAPEILNES-GYGVKIDVWAAGVILYILL 570
R + ++C GTP + APE+L + ID+W+AGVI LL
Sbjct: 182 EAQQERCSQNKCSICLSRRQQVAPRAGTPGFRAPEVLTKCPNQTTAIDMWSAGVIFLSLL 241
Query: 571 CGFPPFVSDTND 582
G PF ++D
Sbjct: 242 SGRYPFYKASDD 253
Score = 29.3 bits (64), Expect = 6.2, Method: Compositional matrix adjust.
Identities = 13/36 (36%), Positives = 25/36 (69%)
Query: 602 WDDISEEAKELISHMLESNPDLRFSAEDVLDHPWLE 637
W+++ +EA +L+ +L+ NP R +AE+ L HP+ +
Sbjct: 322 WNEVPDEAYDLLDKLLDLNPASRITAEEALLHPFFK 357
>pdb|4F0I|A Chain A, Crystal Structure Of Apo Trka
pdb|4F0I|B Chain B, Crystal Structure Of Apo Trka
Length = 300
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 54/240 (22%), Positives = 101/240 (42%), Gaps = 41/240 (17%)
Query: 385 IGDGNFAVV-----RQVYDKHKDMDCALKIIDKSKLLGKKQMIENEVNILRSVNHPNIIK 439
+G+G F V + + M A+K + ++ +Q + E +L + H +I++
Sbjct: 20 LGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASE-SARQDFQREAELLTMLQHQHIVR 78
Query: 440 LLDEYDTNNELYLVIELIKGGDLFDAISKNVKFSEEDSKFMT------------------ 481
L +V E ++ GDL ++ ++ D+K +
Sbjct: 79 FFGVCTEGRPLLMVFEYMRHGDL----NRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAV 134
Query: 482 -QSLASALSYLHDNYIVHRDIKPENLLVEMSGCHVKVLKVGDFGLAQRVLRPMFTVCGTP 540
+A+ + YL + VHRD+ N LV V+K+GDFG+++ + + G
Sbjct: 135 ASQVAAGMVYLAGLHFVHRDLATRNCLVGQG----LVVKIGDFGMSRDIYSTDYYRVGGR 190
Query: 541 T-----YVAPEILNESGYGVKIDVWAAGVILY-ILLCGFPPFVSDTNDQDELFDDILSGQ 594
T ++ PE + + + DVW+ GV+L+ I G P+ +N E D I G+
Sbjct: 191 TMLPIRWMPPESILYRKFTTESDVWSFGVVLWEIFTYGKQPWYQLSN--TEAIDCITQGR 248
>pdb|3GQL|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|B Chain B, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|C Chain C, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 57/229 (24%), Positives = 100/229 (43%), Gaps = 34/229 (14%)
Query: 378 RYSVGQIIGDGNFA--VVRQVYDKHKD-----MDCALKIIDKSKLLGKKQMIENEVNILR 430
R +G+ +G+G F V+ + KD A+K++ + +E+ +++
Sbjct: 29 RLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMK 88
Query: 431 SVN-HPNIIKLLDEYDTNNELYLVIELIKGGDLFDAISK----------------NVKFS 473
+ H NII LL + LY+++E G+L + + + S
Sbjct: 89 MIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYCYNPSHNPEEQLS 148
Query: 474 EEDSKFMTQSLASALSYLHDNYIVHRDIKPENLLVEMSGCHVKVLKVGDFGLAQRVLRPM 533
+D +A + YL +HRD+ N+LV V+K+ DFGLA+ +
Sbjct: 149 SKDLVSCAYQVARGMEYLASKKCIHRDLAARNVLVTED----NVMKIADFGLARDIHHID 204
Query: 534 F---TVCGT-PT-YVAPEILNESGYGVKIDVWAAGVILY-ILLCGFPPF 576
+ T G P ++APE L + Y + DVW+ GV+L+ I G P+
Sbjct: 205 YYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPY 253
>pdb|4GT5|A Chain A, Crystal Structure Of The Inactive Trka Kinase Domain
Length = 306
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 54/240 (22%), Positives = 101/240 (42%), Gaps = 41/240 (17%)
Query: 385 IGDGNFAVV-----RQVYDKHKDMDCALKIIDKSKLLGKKQMIENEVNILRSVNHPNIIK 439
+G+G F V + + M A+K + ++ +Q + E +L + H +I++
Sbjct: 26 LGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASE-SARQDFQREAELLTMLQHQHIVR 84
Query: 440 LLDEYDTNNELYLVIELIKGGDLFDAISKNVKFSEEDSKFMT------------------ 481
L +V E ++ GDL ++ ++ D+K +
Sbjct: 85 FFGVCTEGRPLLMVFEYMRHGDL----NRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAV 140
Query: 482 -QSLASALSYLHDNYIVHRDIKPENLLVEMSGCHVKVLKVGDFGLAQRVLRPMFTVCGTP 540
+A+ + YL + VHRD+ N LV V+K+GDFG+++ + + G
Sbjct: 141 ASQVAAGMVYLAGLHFVHRDLATRNCLVGQG----LVVKIGDFGMSRDIYSTDYYRVGGR 196
Query: 541 T-----YVAPEILNESGYGVKIDVWAAGVILY-ILLCGFPPFVSDTNDQDELFDDILSGQ 594
T ++ PE + + + DVW+ GV+L+ I G P+ +N E D I G+
Sbjct: 197 TMLPIRWMPPESILYRKFTTESDVWSFGVVLWEIFTYGKQPWYQLSN--TEAIDCITQGR 254
>pdb|4F4P|A Chain A, Syk In Complex With Ligand Lasw836
Length = 273
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 49/204 (24%), Positives = 95/204 (46%), Gaps = 38/204 (18%)
Query: 385 IGDGNFAVVRQVYD--------------KHKDMDCALKIIDKSKLLGKKQMIENEVNILR 430
+G GNF V++ Y K++ D ALK +LL E N+++
Sbjct: 13 LGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALK----DELLA-------EANVMQ 61
Query: 431 SVNHPNIIKLLDEYDTNNELYLVIELIKGGDLFDAISKNVKFSEEDSKFMTQSLASALSY 490
+++P I++++ + + + LV+E+ + G L + +N +++ + ++ + Y
Sbjct: 62 QLDNPYIVRMIGICEAESWM-LVMEMAELGPLNKYLQQNRHVKDKNIIELVHQVSMGMKY 120
Query: 491 LHDNYIVHRDIKPENLLVEMSGCHVKVLKVGDFGLAQRVLRPMFTVCGTPT-------YV 543
L ++ VHRD+ N+L+ K+ DFGL+ + LR T +
Sbjct: 121 LEESNFVHRDLAARNVLLVTQ----HYAKISDFGLS-KALRADENYYKAQTHGKWPVKWY 175
Query: 544 APEILNESGYGVKIDVWAAGVILY 567
APE +N + K DVW+ GV+++
Sbjct: 176 APECINYYKFSSKSDVWSFGVLMW 199
>pdb|3TT0|A Chain A, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
pdb|3TT0|B Chain B, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
Length = 382
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 57/229 (24%), Positives = 99/229 (43%), Gaps = 34/229 (14%)
Query: 378 RYSVGQIIGDGNFAVVRQVYDKHKDMDCALKIIDKSKLLGKKQMIE-------NEVNILR 430
R +G+ +G+G F V D D ++ + + K E +E+ +++
Sbjct: 70 RLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMK 129
Query: 431 SVN-HPNIIKLLDEYDTNNELYLVIELIKGGDLFDAI----------------SKNVKFS 473
+ H NII LL + LY+++E G+L + + + + S
Sbjct: 130 MIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLS 189
Query: 474 EEDSKFMTQSLASALSYLHDNYIVHRDIKPENLLVEMSGCHVKVLKVGDFGLAQRVLRPM 533
+D +A + YL +HRD+ N+LV V+K+ DFGLA+ +
Sbjct: 190 SKDLVSCAYQVARGMEYLASKKCIHRDLAARNVLV----TEDNVMKIADFGLARDIHHID 245
Query: 534 F---TVCGT-PT-YVAPEILNESGYGVKIDVWAAGVILY-ILLCGFPPF 576
+ T G P ++APE L + Y + DVW+ GV+L+ I G P+
Sbjct: 246 YYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPY 294
>pdb|3SRV|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In
Complex With A Diaminopyrimidine Carboxamide Inhibitor
Length = 277
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 49/204 (24%), Positives = 95/204 (46%), Gaps = 38/204 (18%)
Query: 385 IGDGNFAVVRQVYD--------------KHKDMDCALKIIDKSKLLGKKQMIENEVNILR 430
+G GNF V++ Y K++ D ALK +LL E N+++
Sbjct: 19 LGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALK----DELLA-------EANVMQ 67
Query: 431 SVNHPNIIKLLDEYDTNNELYLVIELIKGGDLFDAISKNVKFSEEDSKFMTQSLASALSY 490
+++P I++++ + + + LV+E+ + G L + +N +++ + ++ + Y
Sbjct: 68 QLDNPYIVRMIGICEAESWM-LVMEMAELGPLNKYLQQNRHVKDKNIIELVHQVSMGMKY 126
Query: 491 LHDNYIVHRDIKPENLLVEMSGCHVKVLKVGDFGLAQRVLRPMFTVCGTPT-------YV 543
L ++ VHRD+ N+L+ K+ DFGL+ + LR T +
Sbjct: 127 LEESNFVHRDLAARNVLLVTQ----HYAKISDFGLS-KALRADENXYKAQTHGKWPVKWY 181
Query: 544 APEILNESGYGVKIDVWAAGVILY 567
APE +N + K DVW+ GV+++
Sbjct: 182 APECINYYKFSSKSDVWSFGVLMW 205
>pdb|4DFL|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A Sulfonamidopyrazine Piperidine Inhibitor
pdb|4DFN|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
An Adamantylpyrazine Inhibitor
Length = 274
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 49/204 (24%), Positives = 95/204 (46%), Gaps = 38/204 (18%)
Query: 385 IGDGNFAVVRQVYD--------------KHKDMDCALKIIDKSKLLGKKQMIENEVNILR 430
+G GNF V++ Y K++ D ALK +LL E N+++
Sbjct: 15 LGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALK----DELLA-------EANVMQ 63
Query: 431 SVNHPNIIKLLDEYDTNNELYLVIELIKGGDLFDAISKNVKFSEEDSKFMTQSLASALSY 490
+++P I++++ + + + LV+E+ + G L + +N +++ + ++ + Y
Sbjct: 64 QLDNPYIVRMIGICEAESWM-LVMEMAELGPLNKYLQQNRHVKDKNIIELVHQVSMGMKY 122
Query: 491 LHDNYIVHRDIKPENLLVEMSGCHVKVLKVGDFGLAQRVLRPMFTVCGTPT-------YV 543
L ++ VHRD+ N+L+ K+ DFGL+ + LR T +
Sbjct: 123 LEESNFVHRDLAARNVLLVTQ----HYAKISDFGLS-KALRADENYYKAQTHGKWPVKWY 177
Query: 544 APEILNESGYGVKIDVWAAGVILY 567
APE +N + K DVW+ GV+++
Sbjct: 178 APECINYYKFSSKSDVWSFGVLMW 201
>pdb|3SRV|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In
Complex With A Diaminopyrimidine Carboxamide Inhibitor
Length = 277
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 49/204 (24%), Positives = 95/204 (46%), Gaps = 38/204 (18%)
Query: 385 IGDGNFAVVRQVYD--------------KHKDMDCALKIIDKSKLLGKKQMIENEVNILR 430
+G GNF V++ Y K++ D ALK +LL E N+++
Sbjct: 19 LGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALK----DELLA-------EANVMQ 67
Query: 431 SVNHPNIIKLLDEYDTNNELYLVIELIKGGDLFDAISKNVKFSEEDSKFMTQSLASALSY 490
+++P I++++ + + + LV+E+ + G L + +N +++ + ++ + Y
Sbjct: 68 QLDNPYIVRMIGICEAESWM-LVMEMAELGPLNKYLQQNRHVKDKNIIELVHQVSMGMKY 126
Query: 491 LHDNYIVHRDIKPENLLVEMSGCHVKVLKVGDFGLAQRVLRPMFTVCGTPT-------YV 543
L ++ VHRD+ N+L+ K+ DFGL+ + LR T +
Sbjct: 127 LEESNFVHRDLAARNVLLVTQ----HYAKISDFGLS-KALRADENYYKAQTHGKWPVKWY 181
Query: 544 APEILNESGYGVKIDVWAAGVILY 567
APE +N + K DVW+ GV+++
Sbjct: 182 APECINYYKFSSKSDVWSFGVLMW 205
>pdb|4AOJ|A Chain A, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|B Chain B, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|C Chain C, Human Trka In Complex With The Inhibitor Az-23
Length = 329
Score = 56.2 bits (134), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 54/240 (22%), Positives = 101/240 (42%), Gaps = 41/240 (17%)
Query: 385 IGDGNFAVV-----RQVYDKHKDMDCALKIIDKSKLLGKKQMIENEVNILRSVNHPNIIK 439
+G+G F V + + M A+K + ++ +Q + E +L + H +I++
Sbjct: 49 LGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASE-SARQDFQREAELLTMLQHQHIVR 107
Query: 440 LLDEYDTNNELYLVIELIKGGDLFDAISKNVKFSEEDSKFMT------------------ 481
L +V E ++ GDL ++ ++ D+K +
Sbjct: 108 FFGVCTEGRPLLMVFEYMRHGDL----NRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAV 163
Query: 482 -QSLASALSYLHDNYIVHRDIKPENLLVEMSGCHVKVLKVGDFGLAQRVLRPMFTVCGTP 540
+A+ + YL + VHRD+ N LV V+K+GDFG+++ + + G
Sbjct: 164 ASQVAAGMVYLAGLHFVHRDLATRNCLVGQG----LVVKIGDFGMSRDIYSTDYYRVGGR 219
Query: 541 T-----YVAPEILNESGYGVKIDVWAAGVILY-ILLCGFPPFVSDTNDQDELFDDILSGQ 594
T ++ PE + + + DVW+ GV+L+ I G P+ +N E D I G+
Sbjct: 220 TMLPIRWMPPESILYRKFTTESDVWSFGVVLWEIFTYGKQPWYQLSN--TEAIDCITQGR 277
>pdb|1XBA|A Chain A, Crystal Structure Of Apo Syk Tyrosine Kinase Domain
pdb|1XBB|A Chain A, Crystal Structure Of The Syk Tyrosine Kinase Domain With
Gleevec
pdb|1XBC|A Chain A, Crystal Structure Of The Syk Tyrosine Kinase Domain With
Staurosporin
pdb|3FQE|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
Ym193306
pdb|3FQH|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A 2-Substituted 7-Azaindole
pdb|3FQH|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A 2-Substituted 7-Azaindole
pdb|3FQS|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
R406
pdb|4FL1|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
pdb|4FYN|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
3-(8-{4-
[ethyl-(2-hydroxy-ethyl)-amino]-phenylamino}-imidazo[1,
2-a]pyrazin-5- Yl)-phenol
pdb|4FYO|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
N-{(s)-1-
[7-(3,4-dimethoxy-phenylamino)-thiazolo[5,
4-d]pyrimidin-5-yl]- Pyrrolidin-3-yl}-terephthalamic
Acid
pdb|4FZ6|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
[6-((s)-2-
Methyl-pyrrolidin-1-yl)-pyridin-2-yl]-(6-phenyl-
imidazo[1,2- B]pyridazin-8-yl)-amine
Length = 291
Score = 56.2 bits (134), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 49/204 (24%), Positives = 95/204 (46%), Gaps = 38/204 (18%)
Query: 385 IGDGNFAVVRQVYD--------------KHKDMDCALKIIDKSKLLGKKQMIENEVNILR 430
+G GNF V++ Y K++ D ALK +LL E N+++
Sbjct: 25 LGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALK----DELLA-------EANVMQ 73
Query: 431 SVNHPNIIKLLDEYDTNNELYLVIELIKGGDLFDAISKNVKFSEEDSKFMTQSLASALSY 490
+++P I++++ + + + LV+E+ + G L + +N +++ + ++ + Y
Sbjct: 74 QLDNPYIVRMIGICEAESWM-LVMEMAELGPLNKYLQQNRHVKDKNIIELVHQVSMGMKY 132
Query: 491 LHDNYIVHRDIKPENLLVEMSGCHVKVLKVGDFGLAQRVLRPMFTVCGTPT-------YV 543
L ++ VHRD+ N+L+ K+ DFGL+ + LR T +
Sbjct: 133 LEESNFVHRDLAARNVLLVTQ----HYAKISDFGLS-KALRADENYYKAQTHGKWPVKWY 187
Query: 544 APEILNESGYGVKIDVWAAGVILY 567
APE +N + K DVW+ GV+++
Sbjct: 188 APECINYYKFSSKSDVWSFGVLMW 211
>pdb|3EWH|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridyl-Pyrimidine Benzimidazole Inhibitor
Length = 314
Score = 56.2 bits (134), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 57/236 (24%), Positives = 105/236 (44%), Gaps = 33/236 (13%)
Query: 378 RYSVGQIIGDGNFAVVRQV--YDKHKDMDC---ALKIIDKSKLLGKKQMIENEVNILRSV 432
R +G+ +G G F V + + K C A+K++ + + + + +E+ IL +
Sbjct: 19 RLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHI 78
Query: 433 NHP-NIIKLLDE-YDTNNELYLVIELIKGGDLFDAISKN------VKFSEED--SKFMTQ 482
H N++ LL L ++ E K G+L + K + ED F+T
Sbjct: 79 GHHLNVVNLLGACTKPGGPLMVITEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTL 138
Query: 483 --------SLASALSYLHDNYIVHRDIKPENLLVEMSGCHVKVLKVGDFGLAQRVLR-PM 533
+A + +L +HRD+ N+L+ V+K+ DFGLA+ + + P
Sbjct: 139 EHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEK----NVVKICDFGLARDIYKDPD 194
Query: 534 FTVCGTP----TYVAPEILNESGYGVKIDVWAAGVILY-ILLCGFPPFVSDTNDQD 584
+ G ++APE + + Y ++ DVW+ GV+L+ I G P+ D++
Sbjct: 195 YVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEE 250
>pdb|3U6J|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyrazolone Inhibitor
Length = 314
Score = 56.2 bits (134), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 57/236 (24%), Positives = 105/236 (44%), Gaps = 33/236 (13%)
Query: 378 RYSVGQIIGDGNFAVVRQV--YDKHKDMDC---ALKIIDKSKLLGKKQMIENEVNILRSV 432
R +G+ +G G F V + + K C A+K++ + + + + +E+ IL +
Sbjct: 19 RLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHI 78
Query: 433 NHP-NIIKLLDE-YDTNNELYLVIELIKGGDLFDAISKN------VKFSEED--SKFMTQ 482
H N++ LL L ++ E K G+L + K + ED F+T
Sbjct: 79 GHHLNVVNLLGACTKPGGPLMVITEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTL 138
Query: 483 --------SLASALSYLHDNYIVHRDIKPENLLVEMSGCHVKVLKVGDFGLAQRVLR-PM 533
+A + +L +HRD+ N+L+ V+K+ DFGLA+ + + P
Sbjct: 139 EHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEK----NVVKICDFGLARDIYKDPD 194
Query: 534 FTVCGTP----TYVAPEILNESGYGVKIDVWAAGVILY-ILLCGFPPFVSDTNDQD 584
+ G ++APE + + Y ++ DVW+ GV+L+ I G P+ D++
Sbjct: 195 YVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEE 250
>pdb|2PZI|A Chain A, Crystal Structure Of Protein Kinase Pkng From
Mycobacterium Tuberculosis In Complex With
Tetrahydrobenzothiophene Ax20017
pdb|2PZI|B Chain B, Crystal Structure Of Protein Kinase Pkng From
Mycobacterium Tuberculosis In Complex With
Tetrahydrobenzothiophene Ax20017
Length = 681
Score = 55.8 bits (133), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 42/153 (27%), Positives = 74/153 (48%), Gaps = 14/153 (9%)
Query: 427 NILRSVNHPNIIKLLDEYDTNNEL-----YLVIELIKGGDLFDAISKNVKFSEEDSKFMT 481
L V HP+I+++ + + + Y+V+E + G L + + + +E + +
Sbjct: 131 QFLAEVVHPSIVQIFNFVEHTDRHGDPVGYIVMEYVGGQSLKRSKGQKLPVAEAIAYLL- 189
Query: 482 QSLASALSYLHDNYIVHRDIKPENLLVEMSGCHVKVLKVGDFGLAQRVLRPMFTVCGTPT 541
+ ALSYLH +V+ D+KPEN+++ + LK+ D G R+ + GTP
Sbjct: 190 -EILPALSYLHSIGLVYNDLKPENIMLTE-----EQLKLIDLGAVSRI-NSFGYLYGTPG 242
Query: 542 YVAPEILNESGYGVKIDVWAAGVILYILLCGFP 574
+ APEI+ +G V D++ G L L P
Sbjct: 243 FQAPEIVR-TGPTVATDIYTVGRTLAALTLDLP 274
>pdb|2DQ7|X Chain X, Crystal Structure Of Fyn Kinase Domain Complexed With
Staurosporine
Length = 283
Score = 55.8 bits (133), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 62/253 (24%), Positives = 115/253 (45%), Gaps = 24/253 (9%)
Query: 385 IGDGNFAVVRQVYDKHKDMDCALKIIDKSKLLGKKQMIENEVNILRSVNHPNIIKLLDEY 444
+G+G F V + + + A+K + K + + +E E I++ + H +++L Y
Sbjct: 17 LGNGQFGEV-WMGTWNGNTKVAIKTL-KPGTMSPESFLE-EAQIMKKLKHDKLVQL---Y 70
Query: 445 DTNNE--LYLVIELIKGGDLFDAISKNVKFSEEDSKF--MTQSLASALSYLHDNYIVHRD 500
+E +Y+V E + G L D + + + M +A+ ++Y+ +HRD
Sbjct: 71 AVVSEEPIYIVTEYMNKGSLLDFLKDGEGRALKLPNLVDMAAQVAAGMAYIERMNYIHRD 130
Query: 501 IKPENLLVEMSGCHVKVLKVGDFGLAQRVLRPMFTV---CGTPT-YVAPEILNESGYGVK 556
++ N+LV + + K+ DFGLA+ + T P + APE + +K
Sbjct: 131 LRSANILV----GNGLICKIADFGLARLIEDNEXTARQGAKFPIKWTAPEAALYGRFTIK 186
Query: 557 IDVWAAGVILYILLC-GFPPFVSDTNDQDELFDDILSGQYGFPSPYWDDISEEAKELISH 615
DVW+ G++L L+ G P+ N E+ + + G Y P P D EL+ H
Sbjct: 187 SDVWSFGILLTELVTKGRVPYPGMNN--REVLEQVERG-YRMPCP--QDCPISLHELMIH 241
Query: 616 MLESNPDLRFSAE 628
+ +P+ R + E
Sbjct: 242 CWKKDPEERPTFE 254
>pdb|2P2I|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|2P2I|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|3EFL|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
pdb|3EFL|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
Length = 314
Score = 55.5 bits (132), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 57/236 (24%), Positives = 105/236 (44%), Gaps = 33/236 (13%)
Query: 378 RYSVGQIIGDGNFAVVRQV--YDKHKDMDC---ALKIIDKSKLLGKKQMIENEVNILRSV 432
R +G+ +G G F V + + K C A+K++ + + + + +E+ IL +
Sbjct: 19 RLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHI 78
Query: 433 NHP-NIIKLLDE-YDTNNELYLVIELIKGGDLFDAISKN------VKFSEED--SKFMTQ 482
H N++ LL L +++E K G+L + K + ED F+T
Sbjct: 79 GHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTL 138
Query: 483 --------SLASALSYLHDNYIVHRDIKPENLLVEMSGCHVKVLKVGDFGLAQRVLR-PM 533
+A + +L +HRD+ N+L+ V+K+ DFGLA+ + + P
Sbjct: 139 EHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEK----NVVKICDFGLARDIXKDPD 194
Query: 534 FTVCGTP----TYVAPEILNESGYGVKIDVWAAGVILY-ILLCGFPPFVSDTNDQD 584
G ++APE + + Y ++ DVW+ GV+L+ I G P+ D++
Sbjct: 195 XVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEE 250
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.319 0.136 0.396
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 18,540,043
Number of Sequences: 62578
Number of extensions: 781105
Number of successful extensions: 5835
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 959
Number of HSP's successfully gapped in prelim test: 163
Number of HSP's that attempted gapping in prelim test: 2257
Number of HSP's gapped (non-prelim): 1218
length of query: 639
length of database: 14,973,337
effective HSP length: 105
effective length of query: 534
effective length of database: 8,402,647
effective search space: 4487013498
effective search space used: 4487013498
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 55 (25.8 bits)