Query psy6828
Match_columns 392
No_of_seqs 397 out of 3170
Neff 9.1
Searched_HMMs 46136
Date Fri Aug 16 19:30:10 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy6828.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/6828hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG1023|consensus 100.0 4.1E-40 8.9E-45 317.9 14.4 264 96-391 37-434 (484)
2 KOG4171|consensus 100.0 7.3E-36 1.6E-40 291.1 15.5 169 190-391 411-579 (671)
3 smart00044 CYCc Adenylyl- / gu 100.0 9E-29 2E-33 217.8 18.1 170 190-391 4-174 (194)
4 PF00211 Guanylate_cyc: Adenyl 100.0 1.5E-28 3.2E-33 214.6 12.9 143 215-391 2-144 (184)
5 COG2114 CyaA Adenylate cyclase 99.9 3.7E-27 8.1E-32 211.9 14.5 130 220-391 45-175 (227)
6 KOG0593|consensus 99.9 2E-27 4.3E-32 211.0 9.9 158 46-204 4-226 (396)
7 KOG0598|consensus 99.9 2.1E-27 4.6E-32 216.7 8.8 152 46-200 27-219 (357)
8 KOG0615|consensus 99.9 1.5E-27 3.3E-32 219.6 7.8 135 42-177 170-373 (475)
9 KOG0575|consensus 99.9 2.4E-27 5.1E-32 228.4 7.7 132 44-177 18-210 (592)
10 KOG0659|consensus 99.9 1E-26 2.3E-31 203.1 9.6 116 45-161 3-154 (318)
11 KOG0595|consensus 99.9 1.6E-26 3.6E-31 212.9 10.9 151 45-200 11-208 (429)
12 KOG3619|consensus 99.9 1.4E-26 3E-31 234.8 10.6 168 190-391 67-248 (867)
13 KOG0600|consensus 99.9 1.4E-26 3.1E-31 218.2 8.2 116 46-162 119-272 (560)
14 KOG0592|consensus 99.9 7.8E-27 1.7E-31 221.6 3.9 113 46-160 75-226 (604)
15 KOG3618|consensus 99.9 5.4E-26 1.2E-30 220.9 9.0 166 192-391 278-476 (1318)
16 KOG0581|consensus 99.9 2.4E-25 5.2E-30 203.4 11.4 136 49-185 84-279 (364)
17 KOG0661|consensus 99.9 3.5E-26 7.5E-31 214.1 5.0 134 43-177 9-202 (538)
18 KOG0616|consensus 99.9 1.2E-25 2.6E-30 199.2 7.6 149 47-202 47-237 (355)
19 KOG3619|consensus 99.9 2.1E-25 4.5E-30 226.3 10.2 177 191-391 616-803 (867)
20 KOG0660|consensus 99.9 4.1E-25 8.9E-30 201.1 10.5 125 34-160 12-177 (359)
21 cd07302 CHD cyclase homology d 99.9 4.2E-24 9.1E-29 184.6 15.8 139 221-391 1-139 (177)
22 KOG0585|consensus 99.9 4.4E-25 9.5E-30 206.6 8.7 113 45-158 98-260 (576)
23 KOG0663|consensus 99.9 5.2E-25 1.1E-29 198.0 8.5 115 47-162 79-231 (419)
24 KOG0594|consensus 99.9 1.3E-24 2.8E-29 198.2 9.6 110 49-159 16-171 (323)
25 KOG0605|consensus 99.9 1.8E-24 4E-29 205.5 8.5 110 46-157 143-290 (550)
26 KOG0658|consensus 99.9 2E-24 4.4E-29 196.9 8.0 127 46-177 26-218 (364)
27 KOG0597|consensus 99.9 6.6E-24 1.4E-28 202.3 9.6 149 48-200 6-194 (808)
28 KOG0611|consensus 99.9 2.2E-24 4.7E-29 198.3 4.4 133 43-177 52-245 (668)
29 KOG0583|consensus 99.9 1.6E-23 3.4E-28 200.9 10.1 114 43-158 16-171 (370)
30 KOG0694|consensus 99.9 2.5E-23 5.4E-28 203.0 11.5 153 46-201 370-563 (694)
31 KOG4236|consensus 99.9 3.2E-23 6.9E-28 196.1 10.9 137 49-186 569-769 (888)
32 KOG0591|consensus 99.9 2E-23 4.3E-28 184.0 7.5 117 46-162 21-182 (375)
33 KOG0667|consensus 99.9 7.8E-23 1.7E-27 199.2 12.1 134 42-177 184-380 (586)
34 KOG0580|consensus 99.9 4E-24 8.7E-29 184.3 2.6 113 46-159 24-175 (281)
35 KOG0197|consensus 99.9 1.1E-22 2.3E-27 194.1 11.8 153 49-217 211-426 (468)
36 KOG3618|consensus 99.9 7.2E-23 1.6E-27 199.3 7.1 175 190-391 1053-1232(1318)
37 KOG0664|consensus 99.9 9.6E-23 2.1E-27 178.9 6.0 128 49-177 58-250 (449)
38 KOG0198|consensus 99.9 1.2E-21 2.5E-26 181.5 12.9 153 48-201 21-217 (313)
39 cd05571 STKc_PKB Catalytic dom 99.9 5.1E-22 1.1E-26 188.8 9.7 126 51-177 2-187 (323)
40 KOG2345|consensus 99.9 5.7E-22 1.2E-26 171.9 8.4 114 43-157 20-178 (302)
41 cd07869 STKc_PFTAIRE1 Catalyti 99.9 2.7E-22 5.7E-27 188.9 6.6 131 46-177 7-196 (303)
42 KOG0578|consensus 99.9 7.3E-22 1.6E-26 189.1 9.1 155 42-199 271-462 (550)
43 cd05631 STKc_GRK4 Catalytic do 99.9 1.2E-21 2.6E-26 182.8 9.8 129 48-177 4-193 (285)
44 KOG0662|consensus 99.9 5.6E-22 1.2E-26 164.2 6.5 113 47-160 5-153 (292)
45 KOG0588|consensus 99.9 4.3E-22 9.2E-27 193.4 6.4 130 46-177 14-204 (786)
46 KOG0192|consensus 99.9 1.7E-21 3.7E-26 185.4 10.2 109 49-160 46-196 (362)
47 cd05628 STKc_NDR1 Catalytic do 99.9 9.5E-22 2E-26 190.0 8.5 110 47-158 4-151 (363)
48 cd05594 STKc_PKB_alpha Catalyt 99.9 4.3E-21 9.4E-26 182.5 12.5 126 51-177 2-188 (325)
49 KOG0193|consensus 99.9 1.4E-21 2.9E-26 188.3 8.9 107 47-157 395-537 (678)
50 cd05612 STKc_PRKX_like Catalyt 99.9 1.4E-21 3E-26 183.0 8.7 129 47-177 4-190 (291)
51 KOG4717|consensus 99.8 4.3E-22 9.3E-27 188.1 5.2 165 42-207 16-261 (864)
52 KOG0983|consensus 99.8 5.6E-21 1.2E-25 167.9 11.0 136 49-185 97-296 (391)
53 cd05598 STKc_LATS Catalytic do 99.8 4.5E-21 9.8E-26 186.1 11.4 109 46-156 3-149 (376)
54 KOG4250|consensus 99.8 9.8E-22 2.1E-26 192.5 6.6 128 49-177 18-216 (732)
55 KOG0033|consensus 99.8 5.5E-23 1.2E-27 177.9 -2.2 198 44-252 11-293 (355)
56 PTZ00263 protein kinase A cata 99.8 2.3E-21 5.1E-26 184.7 8.6 130 46-177 20-207 (329)
57 cd05585 STKc_YPK1_like Catalyt 99.8 3.6E-21 7.9E-26 182.0 9.7 124 52-177 1-185 (312)
58 cd05601 STKc_CRIK Catalytic do 99.8 5.3E-21 1.1E-25 182.3 10.9 111 47-158 4-152 (330)
59 cd07871 STKc_PCTAIRE3 Catalyti 99.8 2.3E-21 5E-26 181.2 8.2 112 46-158 7-153 (288)
60 cd05626 STKc_LATS2 Catalytic d 99.8 2.9E-21 6.4E-26 187.8 9.2 110 46-157 3-150 (381)
61 KOG0986|consensus 99.8 4.3E-22 9.4E-27 185.6 2.8 159 43-205 184-385 (591)
62 cd05593 STKc_PKB_gamma Catalyt 99.8 5.6E-21 1.2E-25 182.0 10.6 106 51-157 2-144 (328)
63 KOG0584|consensus 99.8 1.5E-21 3.2E-26 189.0 6.5 139 10-187 84-247 (632)
64 cd05599 STKc_NDR_like Catalyti 99.8 3.3E-21 7.2E-26 186.2 8.9 110 47-158 4-151 (364)
65 cd05629 STKc_NDR_like_fungal C 99.8 4.6E-21 9.9E-26 186.2 9.8 109 47-156 4-149 (377)
66 cd05595 STKc_PKB_beta Catalyti 99.8 4.3E-21 9.4E-26 182.4 9.4 126 51-177 2-187 (323)
67 cd05627 STKc_NDR2 Catalytic do 99.8 8E-21 1.7E-25 183.3 11.2 109 48-158 5-151 (360)
68 cd05625 STKc_LATS1 Catalytic d 99.8 4.4E-21 9.6E-26 186.6 9.4 109 46-156 3-149 (382)
69 cd05591 STKc_nPKC_epsilon Cata 99.8 5.9E-21 1.3E-25 181.3 9.7 126 51-177 2-188 (321)
70 cd05587 STKc_cPKC Catalytic do 99.8 3.8E-21 8.2E-26 182.9 8.0 129 48-177 4-193 (324)
71 cd05575 STKc_SGK Catalytic dom 99.8 1.1E-20 2.3E-25 179.7 10.9 126 51-177 2-188 (323)
72 cd05586 STKc_Sck1_like Catalyt 99.8 1.3E-20 2.8E-25 179.7 11.4 125 52-177 1-189 (330)
73 KOG0604|consensus 99.8 4.3E-21 9.4E-26 170.6 7.4 129 43-177 61-255 (400)
74 cd05573 STKc_ROCK_NDR_like Cat 99.8 7.5E-21 1.6E-25 182.6 9.6 112 46-159 3-152 (350)
75 cd05604 STKc_SGK3 Catalytic do 99.8 1.4E-20 3.1E-25 179.0 11.4 126 51-177 2-188 (325)
76 cd05602 STKc_SGK1 Catalytic do 99.8 9.4E-21 2E-25 180.2 10.0 126 51-177 2-188 (325)
77 KOG0577|consensus 99.8 4E-21 8.6E-26 184.2 7.0 150 23-177 9-217 (948)
78 cd05600 STKc_Sid2p_Dbf2p Catal 99.8 9.9E-21 2.1E-25 180.7 9.7 130 46-177 3-190 (333)
79 KOG0984|consensus 99.8 8.2E-21 1.8E-25 160.6 7.9 137 48-185 50-254 (282)
80 KOG0201|consensus 99.8 2.5E-20 5.4E-25 173.5 11.7 149 43-195 12-200 (467)
81 PTZ00036 glycogen synthase kin 99.8 1.8E-20 3.8E-25 185.5 11.4 130 43-177 65-263 (440)
82 KOG1187|consensus 99.8 1.2E-20 2.6E-25 180.5 9.8 114 46-160 77-229 (361)
83 cd05603 STKc_SGK2 Catalytic do 99.8 1.7E-20 3.7E-25 178.1 10.8 126 51-177 2-188 (321)
84 cd05616 STKc_cPKC_beta Catalyt 99.8 9.8E-21 2.1E-25 179.9 9.1 108 49-157 5-150 (323)
85 cd05620 STKc_nPKC_delta Cataly 99.8 8.3E-21 1.8E-25 179.9 8.6 126 51-177 2-188 (316)
86 cd07848 STKc_CDKL5 Catalytic d 99.8 3E-20 6.4E-25 173.3 12.2 131 46-177 3-193 (287)
87 cd05590 STKc_nPKC_eta Catalyti 99.8 1.8E-20 4E-25 177.9 10.7 126 51-177 2-188 (320)
88 cd05621 STKc_ROCK2 Catalytic d 99.8 9.4E-21 2E-25 183.4 8.8 113 45-158 44-192 (370)
89 PTZ00426 cAMP-dependent protei 99.8 1.1E-20 2.3E-25 181.0 9.0 130 46-177 32-220 (340)
90 KOG0599|consensus 99.8 2E-21 4.4E-26 170.6 3.4 117 44-162 17-177 (411)
91 cd05597 STKc_DMPK_like Catalyt 99.8 1.3E-20 2.9E-25 179.7 9.4 111 47-158 4-152 (331)
92 cd05615 STKc_cPKC_alpha Cataly 99.8 1.1E-20 2.3E-25 179.7 8.4 108 49-157 5-150 (323)
93 cd05618 STKc_aPKC_iota Catalyt 99.8 2E-20 4.3E-25 178.4 10.0 107 50-157 1-145 (329)
94 cd07876 STKc_JNK2 Catalytic do 99.8 1.5E-20 3.3E-25 181.3 9.1 134 43-177 20-214 (359)
95 cd07878 STKc_p38beta_MAPK11 Ca 99.8 2.2E-20 4.7E-25 179.0 10.0 133 44-177 15-208 (343)
96 cd05614 STKc_MSK2_N N-terminal 99.8 1.8E-20 4E-25 178.7 9.4 108 48-157 4-154 (332)
97 cd05617 STKc_aPKC_zeta Catalyt 99.8 1.9E-20 4.2E-25 178.3 9.4 107 50-157 1-145 (327)
98 cd05608 STKc_GRK1 Catalytic do 99.8 2.6E-20 5.7E-25 173.3 9.9 106 52-158 1-147 (280)
99 cd05588 STKc_aPKC Catalytic do 99.8 2.1E-20 4.6E-25 178.1 9.4 106 51-157 2-145 (329)
100 KOG1035|consensus 99.8 2.4E-20 5.3E-25 191.7 10.2 97 105-202 695-814 (1351)
101 cd07862 STKc_CDK6 Catalytic do 99.8 2.5E-20 5.4E-25 174.1 9.5 131 46-177 3-201 (290)
102 cd05623 STKc_MRCK_alpha Cataly 99.8 1.7E-20 3.8E-25 179.0 8.5 111 47-158 4-152 (332)
103 PTZ00283 serine/threonine prot 99.8 2.9E-20 6.4E-25 186.3 10.1 134 43-177 31-237 (496)
104 KOG0194|consensus 99.8 6.5E-20 1.4E-24 177.5 12.0 128 49-177 162-354 (474)
105 KOG1989|consensus 99.8 3.1E-20 6.6E-25 186.5 10.0 114 44-157 37-195 (738)
106 cd07874 STKc_JNK3 Catalytic do 99.8 2.1E-20 4.6E-25 180.0 8.4 134 43-177 16-210 (355)
107 cd05589 STKc_PKN Catalytic dom 99.8 1.7E-20 3.7E-25 178.3 7.6 108 49-157 4-150 (324)
108 cd07875 STKc_JNK1 Catalytic do 99.8 2.7E-20 5.8E-25 179.9 9.0 134 43-177 23-217 (364)
109 KOG0586|consensus 99.8 3.8E-20 8.3E-25 178.9 9.6 132 44-177 56-247 (596)
110 cd07853 STKc_NLK Catalytic dom 99.8 4.4E-20 9.5E-25 179.0 10.0 129 48-177 4-197 (372)
111 cd05624 STKc_MRCK_beta Catalyt 99.8 4.4E-20 9.6E-25 176.1 9.7 111 47-158 4-152 (331)
112 PLN00034 mitogen-activated pro 99.8 2.9E-20 6.3E-25 178.9 8.5 111 48-159 78-219 (353)
113 cd05570 STKc_PKC Catalytic dom 99.8 2.3E-20 4.9E-25 177.1 7.5 126 51-177 2-188 (318)
114 KOG0589|consensus 99.8 1.5E-20 3.3E-25 178.7 6.2 131 46-177 6-198 (426)
115 cd05582 STKc_RSK_N N-terminal 99.8 1.1E-19 2.4E-24 172.3 12.0 127 50-177 2-190 (318)
116 cd05584 STKc_p70S6K Catalytic 99.8 6.5E-20 1.4E-24 174.3 10.4 106 50-157 2-149 (323)
117 KOG1006|consensus 99.8 9.3E-21 2E-25 165.9 4.1 137 48-185 68-271 (361)
118 cd05592 STKc_nPKC_theta_delta 99.8 6.5E-20 1.4E-24 173.8 10.2 107 51-158 2-146 (316)
119 cd07872 STKc_PCTAIRE2 Catalyti 99.8 3.6E-20 7.9E-25 174.8 8.3 112 46-158 8-154 (309)
120 KOG0032|consensus 99.8 5.4E-20 1.2E-24 176.5 9.5 116 42-160 33-191 (382)
121 PTZ00284 protein kinase; Provi 99.8 4.6E-20 1E-24 184.1 9.3 132 43-177 128-337 (467)
122 PHA03209 serine/threonine kina 99.8 3.4E-20 7.3E-25 178.7 7.8 113 45-158 67-207 (357)
123 cd07863 STKc_CDK4 Catalytic do 99.8 5.6E-20 1.2E-24 171.4 8.9 113 46-159 2-159 (288)
124 KOG0607|consensus 99.8 4E-20 8.6E-25 165.8 7.1 110 47-157 81-228 (463)
125 cd05619 STKc_nPKC_theta Cataly 99.8 6.8E-20 1.5E-24 173.7 9.0 106 51-157 2-145 (316)
126 cd05102 PTKc_VEGFR3 Catalytic 99.8 7E-20 1.5E-24 175.1 8.7 54 104-158 171-224 (338)
127 PHA03212 serine/threonine kina 99.8 8.6E-20 1.9E-24 177.9 9.3 106 44-157 92-231 (391)
128 cd07859 STKc_TDY_MAPK_plant Ca 99.8 1E-19 2.3E-24 173.6 9.7 111 46-158 2-153 (338)
129 PHA02882 putative serine/threo 99.8 9.4E-20 2E-24 170.9 9.2 114 43-158 11-176 (294)
130 cd05108 PTKc_EGFR Catalytic do 99.8 2.5E-19 5.5E-24 169.6 12.2 113 46-159 9-160 (316)
131 KOG0574|consensus 99.8 1.3E-20 2.8E-25 167.6 2.7 131 45-178 34-222 (502)
132 cd05052 PTKc_Abl Catalytic dom 99.8 7.1E-19 1.5E-23 161.9 13.7 129 47-177 9-197 (263)
133 cd05622 STKc_ROCK1 Catalytic d 99.8 1.3E-19 2.8E-24 175.5 9.2 115 44-159 43-193 (371)
134 KOG0690|consensus 99.8 3.4E-20 7.3E-25 166.6 4.3 128 49-177 173-360 (516)
135 cd05605 STKc_GRK4_like Catalyt 99.8 1.6E-19 3.4E-24 168.5 8.9 110 48-158 4-152 (285)
136 cd05607 STKc_GRK7 Catalytic do 99.8 1.9E-19 4.1E-24 167.3 9.3 106 52-158 1-145 (277)
137 KOG0668|consensus 99.8 3.3E-20 7.1E-25 159.3 3.7 129 45-177 39-225 (338)
138 cd05632 STKc_GRK5 Catalytic do 99.8 2.3E-19 4.9E-24 167.5 9.6 109 49-158 5-152 (285)
139 cd05071 PTKc_Src Catalytic dom 99.8 5.8E-19 1.2E-23 162.6 12.2 131 44-177 6-195 (262)
140 PLN03225 Serine/threonine-prot 99.8 1.4E-19 3.1E-24 183.3 8.9 113 45-158 133-306 (566)
141 PHA03211 serine/threonine kina 99.8 1.7E-19 3.8E-24 178.5 9.1 108 45-159 170-311 (461)
142 cd05596 STKc_ROCK Catalytic do 99.8 1.9E-19 4.2E-24 174.3 9.3 114 45-159 44-193 (370)
143 cd05081 PTKc_Jak2_Jak3_rpt2 Ca 99.8 3.2E-19 7E-24 166.0 10.0 113 46-159 6-159 (284)
144 KOG0612|consensus 99.8 5.5E-20 1.2E-24 187.8 5.1 112 46-159 77-226 (1317)
145 KOG1152|consensus 99.8 2.7E-19 5.9E-24 171.4 9.5 115 46-162 563-724 (772)
146 cd05115 PTKc_Zap-70 Catalytic 99.8 1.1E-18 2.4E-23 160.2 13.3 107 51-158 2-145 (257)
147 KOG0582|consensus 99.8 4.3E-19 9.3E-24 165.6 10.4 112 46-158 28-176 (516)
148 KOG0196|consensus 99.8 3.1E-19 6.8E-24 176.2 9.7 136 47-183 632-832 (996)
149 KOG1026|consensus 99.8 1.6E-19 3.4E-24 180.8 7.7 172 49-254 491-744 (774)
150 KOG4279|consensus 99.8 5E-19 1.1E-23 172.6 10.7 126 51-177 582-770 (1226)
151 cd05058 PTKc_Met_Ron Catalytic 99.8 1.9E-18 4.2E-23 158.7 14.2 108 50-158 1-148 (262)
152 KOG0666|consensus 99.8 1.8E-19 3.9E-24 161.1 7.0 116 46-162 26-190 (438)
153 cd07873 STKc_PCTAIRE1 Catalyti 99.8 3.3E-19 7.2E-24 167.6 9.1 113 45-158 7-154 (301)
154 cd05109 PTKc_HER2 Catalytic do 99.8 9.6E-19 2.1E-23 162.5 12.1 112 46-158 9-159 (279)
155 cd05096 PTKc_DDR1 Catalytic do 99.8 7.2E-19 1.6E-23 165.5 11.1 113 45-158 6-188 (304)
156 cd05630 STKc_GRK6 Catalytic do 99.8 4.6E-19 1E-23 165.4 9.6 109 49-158 5-152 (285)
157 cd05104 PTKc_Kit Catalytic dom 99.8 1.4E-18 3E-23 168.6 13.0 139 19-158 6-264 (375)
158 cd07868 STKc_CDK8 Catalytic do 99.8 1E-18 2.2E-23 165.5 11.4 150 49-201 6-211 (317)
159 PF00069 Pkinase: Protein kina 99.8 2.3E-19 4.9E-24 164.4 6.7 109 47-157 2-147 (260)
160 cd05084 PTKc_Fes Catalytic dom 99.8 2.2E-18 4.8E-23 157.4 13.2 108 50-158 1-144 (252)
161 cd05116 PTKc_Syk Catalytic dom 99.8 5.3E-19 1.1E-23 162.2 8.9 106 51-158 2-145 (257)
162 cd06649 PKc_MEK2 Catalytic dom 99.8 8.4E-19 1.8E-23 167.2 10.5 130 46-177 7-194 (331)
163 cd05079 PTKc_Jak1_rpt2 Catalyt 99.8 9.2E-19 2E-23 163.1 10.4 112 46-158 6-159 (284)
164 PTZ00267 NIMA-related protein 99.8 6.8E-19 1.5E-23 176.1 9.8 116 43-159 66-220 (478)
165 KOG0671|consensus 99.8 1.1E-18 2.4E-23 160.0 10.3 134 42-177 87-301 (415)
166 cd06607 STKc_TAO Catalytic dom 99.8 4.7E-18 1E-22 160.3 14.8 135 42-177 13-206 (307)
167 cd07839 STKc_CDK5 Catalytic do 99.8 4.3E-19 9.4E-24 165.1 7.6 111 47-158 3-149 (284)
168 KOG0610|consensus 99.8 6.4E-19 1.4E-23 163.1 8.4 109 47-156 80-227 (459)
169 cd05064 PTKc_EphR_A10 Catalyti 99.8 8.7E-19 1.9E-23 161.7 9.4 111 46-157 7-156 (266)
170 cd07870 STKc_PFTAIRE2 Catalyti 99.8 8.2E-19 1.8E-23 164.0 8.8 113 44-157 5-152 (291)
171 PHA02988 hypothetical protein; 99.8 3.2E-18 7E-23 159.6 12.7 124 50-177 26-214 (283)
172 cd05106 PTKc_CSF-1R Catalytic 99.8 2E-18 4.2E-23 167.5 11.6 55 103-158 208-262 (374)
173 cd06643 STKc_SLK Catalytic dom 99.8 1.9E-18 4.1E-23 160.8 11.1 110 48-158 9-153 (282)
174 cd05633 STKc_GRK3 Catalytic do 99.8 1.5E-18 3.2E-23 161.5 10.3 105 51-157 1-146 (279)
175 cd06646 STKc_MAP4K5 Catalytic 99.8 1.1E-18 2.3E-23 160.9 9.3 111 46-158 11-156 (267)
176 cd06644 STKc_STK10_LOK Catalyt 99.8 1.4E-18 3.1E-23 162.4 10.1 114 43-157 11-159 (292)
177 cd05060 PTKc_Syk_like Catalyti 99.8 4.2E-18 9.1E-23 156.2 12.9 107 50-158 1-145 (257)
178 cd06650 PKc_MEK1 Catalytic dom 99.8 1.2E-18 2.7E-23 166.2 9.7 131 45-177 6-194 (333)
179 cd06619 PKc_MKK5 Catalytic dom 99.8 1.1E-18 2.3E-23 162.3 8.7 109 49-158 6-145 (279)
180 cd07844 STKc_PCTAIRE_like Cata 99.8 1E-18 2.2E-23 163.2 8.2 112 46-158 7-153 (291)
181 cd05072 PTKc_Lyn Catalytic dom 99.8 6.2E-18 1.3E-22 155.3 13.1 110 46-158 8-153 (261)
182 cd05065 PTKc_EphR_B Catalytic 99.8 2.6E-18 5.6E-23 158.7 10.5 111 47-158 7-156 (269)
183 cd06645 STKc_MAP4K3 Catalytic 99.8 1.2E-18 2.6E-23 160.6 8.1 111 46-158 11-156 (267)
184 PHA03207 serine/threonine kina 99.8 2.2E-18 4.7E-23 168.2 10.3 109 44-159 92-236 (392)
185 cd08219 STKc_Nek3 Catalytic do 99.8 6.4E-18 1.4E-22 154.7 12.8 129 48-177 4-192 (255)
186 cd05089 PTKc_Tie1 Catalytic do 99.8 9.7E-18 2.1E-22 157.4 14.2 129 48-177 6-210 (297)
187 cd05606 STKc_beta_ARK Catalyti 99.8 2.6E-18 5.6E-23 159.7 10.1 106 51-158 1-147 (278)
188 cd07850 STKc_JNK Catalytic dom 99.8 1.6E-18 3.4E-23 166.9 8.8 134 43-177 15-209 (353)
189 cd05148 PTKc_Srm_Brk Catalytic 99.8 1.4E-18 3E-23 159.5 8.1 130 46-177 8-196 (261)
190 cd07861 STKc_CDK1_euk Catalyti 99.8 1.6E-18 3.6E-23 161.2 8.6 110 48-158 4-151 (285)
191 KOG4721|consensus 99.8 2.4E-19 5.2E-24 171.4 2.9 131 50-184 130-312 (904)
192 KOG0608|consensus 99.8 6.8E-19 1.5E-23 170.2 5.9 159 44-203 629-868 (1034)
193 KOG0669|consensus 99.8 1.7E-19 3.8E-24 156.9 1.7 156 45-201 18-224 (376)
194 cd05039 PTKc_Csk_like Catalyti 99.8 5.8E-18 1.3E-22 155.0 11.8 126 48-177 10-191 (256)
195 cd06656 STKc_PAK3 Catalytic do 99.8 2E-18 4.4E-23 162.0 8.9 115 44-159 19-166 (297)
196 cd05067 PTKc_Lck_Blk Catalytic 99.8 6.3E-18 1.4E-22 155.2 12.0 129 46-177 8-195 (260)
197 cd05054 PTKc_VEGFR Catalytic d 99.8 2.8E-18 6.2E-23 164.0 9.9 55 103-158 169-223 (337)
198 cd07841 STKc_CDK7 Catalytic do 99.8 2.3E-18 5E-23 161.4 9.2 111 48-159 4-153 (298)
199 cd05111 PTK_HER3 Pseudokinase 99.8 7.2E-18 1.6E-22 156.8 12.4 111 47-158 10-159 (279)
200 KOG0579|consensus 99.8 2.9E-19 6.3E-24 172.6 3.0 108 49-157 37-179 (1187)
201 cd08228 STKc_Nek6 Catalytic do 99.7 2.8E-18 6E-23 158.1 9.2 112 46-158 4-156 (267)
202 cd05069 PTKc_Yes Catalytic dom 99.7 8.8E-18 1.9E-22 154.4 12.5 129 46-177 8-195 (260)
203 cd05103 PTKc_VEGFR2 Catalytic 99.7 9.6E-18 2.1E-22 160.8 13.1 54 104-158 176-229 (343)
204 cd08529 STKc_FA2-like Catalyti 99.7 6.1E-18 1.3E-22 154.6 11.3 128 49-177 5-193 (256)
205 cd06617 PKc_MKK3_6 Catalytic d 99.7 3.9E-18 8.4E-23 158.5 10.1 110 48-158 5-154 (283)
206 KOG0614|consensus 99.7 2.7E-19 5.8E-24 169.1 2.2 114 49-164 425-576 (732)
207 cd05068 PTKc_Frk_like Catalyti 99.7 6.9E-18 1.5E-22 155.1 11.6 110 46-158 8-153 (261)
208 cd06658 STKc_PAK5 Catalytic do 99.7 3.3E-18 7E-23 160.3 9.6 110 48-158 26-168 (292)
209 cd05070 PTKc_Fyn_Yrk Catalytic 99.7 9.7E-18 2.1E-22 154.0 12.4 129 46-177 8-195 (260)
210 cd05077 PTK_Jak1_rpt1 Pseudoki 99.7 3.5E-18 7.6E-23 157.4 9.5 107 51-158 2-162 (262)
211 cd05040 PTKc_Ack_like Catalyti 99.7 4.7E-18 1E-22 155.7 10.3 110 50-160 1-149 (257)
212 cd05063 PTKc_EphR_A2 Catalytic 99.7 3.7E-18 8.1E-23 157.4 9.6 111 47-158 8-157 (268)
213 cd07849 STKc_ERK1_2_like Catal 99.7 2.5E-18 5.4E-23 164.3 8.7 114 44-158 5-156 (336)
214 cd05066 PTKc_EphR_A Catalytic 99.7 4.6E-18 1E-22 156.9 10.2 113 46-159 6-157 (267)
215 cd05088 PTKc_Tie2 Catalytic do 99.7 4.8E-18 1E-22 159.9 10.5 129 48-177 11-215 (303)
216 cd06654 STKc_PAK1 Catalytic do 99.7 3.1E-18 6.7E-23 160.7 9.1 114 44-158 20-166 (296)
217 cd06611 STKc_SLK_like Catalyti 99.7 2.5E-18 5.5E-23 159.7 8.4 113 45-158 6-153 (280)
218 cd05059 PTKc_Tec_like Catalyti 99.7 3.1E-18 6.8E-23 157.0 8.8 108 48-158 8-150 (256)
219 cd05038 PTKc_Jak_rpt2 Catalyti 99.7 6.1E-18 1.3E-22 157.1 10.9 111 48-159 8-160 (284)
220 cd07867 STKc_CDC2L6 Catalytic 99.7 5.6E-18 1.2E-22 160.2 10.7 150 48-200 5-210 (317)
221 cd06613 STKc_MAP4K3_like Catal 99.7 4.4E-18 9.5E-23 156.1 9.6 114 45-159 4-152 (262)
222 KOG1151|consensus 99.7 7.2E-19 1.6E-23 163.8 4.4 166 36-201 455-679 (775)
223 cd05075 PTKc_Axl Catalytic dom 99.7 7.8E-18 1.7E-22 155.5 11.3 109 49-158 4-162 (272)
224 cd07845 STKc_CDK10 Catalytic d 99.7 2.3E-18 5E-23 162.4 7.8 113 46-159 9-159 (309)
225 PRK13184 pknD serine/threonine 99.7 4.3E-18 9.4E-23 177.1 10.5 113 45-158 3-163 (932)
226 cd06652 STKc_MEKK2 Catalytic d 99.7 3.9E-18 8.4E-23 157.1 9.1 109 48-158 6-156 (265)
227 cd00192 PTKc Catalytic domain 99.7 1.4E-17 3.1E-22 152.3 12.8 110 50-160 1-157 (262)
228 cd05085 PTKc_Fer Catalytic dom 99.7 6.6E-18 1.4E-22 154.0 10.5 105 51-157 2-142 (250)
229 cd05577 STKc_GRK Catalytic dom 99.7 5.2E-18 1.1E-22 157.4 10.0 125 52-177 1-186 (277)
230 KOG1094|consensus 99.7 2.7E-18 5.9E-23 164.7 8.1 161 15-177 502-731 (807)
231 PRK09188 serine/threonine prot 99.7 4.7E-18 1E-22 161.9 9.7 118 42-160 16-164 (365)
232 cd05037 PTK_Jak_rpt1 Pseudokin 99.7 4.9E-18 1.1E-22 155.5 9.5 106 51-158 2-158 (259)
233 cd07833 STKc_CDKL Catalytic do 99.7 7.8E-18 1.7E-22 156.8 11.0 113 46-159 3-151 (288)
234 cd05110 PTKc_HER4 Catalytic do 99.7 1.1E-17 2.3E-22 157.5 12.0 111 47-158 10-159 (303)
235 cd06659 STKc_PAK6 Catalytic do 99.7 3.2E-18 7E-23 160.7 8.4 110 48-158 25-167 (297)
236 cd05034 PTKc_Src_like Catalyti 99.7 1.5E-17 3.2E-22 152.7 12.5 130 45-177 7-196 (261)
237 cd06628 STKc_MAPKKK_Byr2_like 99.7 5.5E-18 1.2E-22 156.1 9.6 111 47-159 3-157 (267)
238 cd07832 STKc_CCRK Catalytic do 99.7 3.9E-18 8.4E-23 158.7 8.6 112 47-159 3-150 (286)
239 cd06637 STKc_TNIK Catalytic do 99.7 3.3E-18 7.1E-23 158.1 8.1 113 44-158 6-161 (272)
240 cd07847 STKc_CDKL1_4 Catalytic 99.7 6.4E-18 1.4E-22 157.2 10.1 112 46-158 3-150 (286)
241 cd06655 STKc_PAK2 Catalytic do 99.7 4.4E-18 9.6E-23 159.7 9.0 115 44-159 19-166 (296)
242 cd05035 PTKc_Axl_like Catalyti 99.7 1.7E-17 3.7E-22 153.2 12.7 110 48-158 3-163 (273)
243 KOG3653|consensus 99.7 3.1E-18 6.8E-23 160.9 7.6 106 49-161 215-369 (534)
244 KOG1345|consensus 99.7 8E-18 1.7E-22 148.0 9.6 138 45-184 25-226 (378)
245 cd08223 STKc_Nek4 Catalytic do 99.7 8.5E-18 1.8E-22 153.9 10.3 113 46-159 2-153 (257)
246 cd05091 PTKc_Ror2 Catalytic do 99.7 7.9E-18 1.7E-22 156.6 10.2 110 48-158 9-174 (283)
247 cd08229 STKc_Nek7 Catalytic do 99.7 5.4E-18 1.2E-22 156.2 8.9 111 47-158 5-156 (267)
248 cd05114 PTKc_Tec_Rlk Catalytic 99.7 8.4E-18 1.8E-22 154.1 10.1 107 49-158 9-150 (256)
249 cd06651 STKc_MEKK3 Catalytic d 99.7 7.6E-18 1.6E-22 155.3 9.8 110 47-158 5-156 (266)
250 cd06616 PKc_MKK4 Catalytic dom 99.7 6.4E-18 1.4E-22 157.6 9.5 109 49-158 9-158 (288)
251 cd06624 STKc_ASK Catalytic dom 99.7 7.1E-18 1.5E-22 155.6 9.5 108 50-158 14-159 (268)
252 cd05080 PTKc_Tyk2_rpt2 Catalyt 99.7 6.4E-18 1.4E-22 157.3 9.2 109 47-158 7-157 (283)
253 cd05093 PTKc_TrkB Catalytic do 99.7 1.9E-17 4.2E-22 154.6 12.4 112 46-158 7-170 (288)
254 cd05033 PTKc_EphR Catalytic do 99.7 2.2E-17 4.8E-22 152.1 12.7 113 46-159 6-157 (266)
255 cd07877 STKc_p38alpha_MAPK14 C 99.7 6.9E-18 1.5E-22 161.9 9.6 134 43-177 16-210 (345)
256 cd05580 STKc_PKA Catalytic dom 99.7 5.5E-18 1.2E-22 158.4 8.6 111 47-159 4-152 (290)
257 KOG1095|consensus 99.7 6.2E-18 1.3E-22 175.1 9.8 130 47-177 695-896 (1025)
258 cd06635 STKc_TAO1 Catalytic do 99.7 1.5E-17 3.3E-22 157.6 11.7 131 46-177 27-216 (317)
259 KOG0696|consensus 99.7 6.7E-19 1.5E-23 162.7 2.4 150 49-201 354-545 (683)
260 cd05113 PTKc_Btk_Bmx Catalytic 99.7 8.7E-18 1.9E-22 154.1 9.8 109 47-158 7-150 (256)
261 cd05082 PTKc_Csk Catalytic dom 99.7 8.3E-18 1.8E-22 154.1 9.6 126 47-177 9-191 (256)
262 cd05076 PTK_Tyk2_rpt1 Pseudoki 99.7 6.6E-18 1.4E-22 156.7 9.0 106 51-157 2-173 (274)
263 KOG0670|consensus 99.7 1.5E-17 3.3E-22 157.7 11.5 134 42-177 430-627 (752)
264 cd05609 STKc_MAST Catalytic do 99.7 1.1E-17 2.4E-22 157.6 10.6 108 48-157 5-150 (305)
265 cd05078 PTK_Jak2_Jak3_rpt1 Pse 99.7 2.4E-18 5.1E-23 158.1 5.9 108 50-158 1-158 (258)
266 cd05048 PTKc_Ror Catalytic Dom 99.7 1.9E-17 4.1E-22 154.0 12.0 111 47-158 8-174 (283)
267 cd05073 PTKc_Hck Catalytic dom 99.7 3.1E-17 6.7E-22 150.7 13.2 112 44-158 6-152 (260)
268 cd08224 STKc_Nek6_Nek7 Catalyt 99.7 1E-17 2.2E-22 154.1 9.9 112 46-158 4-156 (267)
269 cd05574 STKc_phototropin_like 99.7 1.1E-17 2.5E-22 158.2 10.5 112 46-158 3-153 (316)
270 cd05611 STKc_Rim15_like Cataly 99.7 9.2E-18 2E-22 154.1 9.4 126 50-177 2-185 (260)
271 cd05578 STKc_Yank1 Catalytic d 99.7 1E-17 2.2E-22 153.6 9.7 129 47-177 3-191 (258)
272 PF07714 Pkinase_Tyr: Protein 99.7 5.1E-18 1.1E-22 156.1 7.7 128 49-177 4-197 (259)
273 KOG1025|consensus 99.7 1.6E-17 3.4E-22 164.9 11.5 130 47-177 699-892 (1177)
274 cd06653 STKc_MEKK3_like_1 Cata 99.7 1.2E-17 2.6E-22 153.8 10.1 111 46-158 4-156 (264)
275 cd07858 STKc_TEY_MAPK_plant Ca 99.7 9.2E-18 2E-22 160.5 9.7 132 44-177 5-201 (337)
276 cd05579 STKc_MAST_like Catalyt 99.7 1E-17 2.3E-22 153.6 9.6 105 52-158 1-143 (265)
277 cd07860 STKc_CDK2_3 Catalytic 99.7 9.8E-18 2.1E-22 156.0 9.5 111 47-158 3-150 (284)
278 cd05056 PTKc_FAK Catalytic dom 99.7 1.2E-17 2.5E-22 154.4 10.0 111 47-158 9-157 (270)
279 cd05057 PTKc_EGFR_like Catalyt 99.7 3.2E-17 7E-22 152.2 13.0 113 46-159 9-160 (279)
280 cd06615 PKc_MEK Catalytic doma 99.7 1.1E-17 2.3E-22 158.0 9.8 129 47-177 4-190 (308)
281 PTZ00266 NIMA-related protein 99.7 8.1E-18 1.8E-22 175.9 9.8 134 43-177 12-235 (1021)
282 cd07865 STKc_CDK9 Catalytic do 99.7 7.3E-18 1.6E-22 158.7 8.7 112 46-158 14-169 (310)
283 cd05122 PKc_STE Catalytic doma 99.7 1.4E-17 3E-22 151.3 10.0 113 48-161 4-151 (253)
284 cd05053 PTKc_FGFR Catalytic do 99.7 6.8E-17 1.5E-21 151.1 14.9 112 46-158 14-182 (293)
285 cd06630 STKc_MEKK1 Catalytic d 99.7 1.3E-17 2.9E-22 153.6 10.0 111 48-160 4-156 (268)
286 cd05105 PTKc_PDGFR_alpha Catal 99.7 1.7E-17 3.7E-22 162.1 11.2 55 103-158 233-287 (400)
287 KOG2052|consensus 99.7 3.9E-18 8.5E-23 159.2 6.3 108 47-161 214-369 (513)
288 cd06623 PKc_MAPKK_plant_like C 99.7 6.6E-18 1.4E-22 155.0 7.8 127 49-177 6-192 (264)
289 cd06626 STKc_MEKK4 Catalytic d 99.7 1.3E-17 2.9E-22 153.1 9.8 112 46-159 2-150 (264)
290 cd07854 STKc_MAPK4_6 Catalytic 99.7 1.2E-17 2.6E-22 160.0 9.8 115 43-158 4-165 (342)
291 cd07857 STKc_MPK1 Catalytic do 99.7 1E-17 2.2E-22 159.9 9.1 109 48-158 4-155 (332)
292 cd06622 PKc_MAPKK_PBS2_like Ca 99.7 1.7E-17 3.7E-22 154.6 10.5 110 48-158 5-153 (286)
293 cd07831 STKc_MOK Catalytic dom 99.7 1E-17 2.2E-22 155.6 8.9 109 48-158 3-149 (282)
294 cd07837 STKc_CdkB_plant Cataly 99.7 8.3E-18 1.8E-22 157.3 8.4 111 46-157 3-160 (295)
295 cd06612 STKc_MST1_2 Catalytic 99.7 1.4E-17 3E-22 152.3 9.6 112 45-159 4-150 (256)
296 cd07855 STKc_ERK5 Catalytic do 99.7 1.1E-17 2.5E-22 159.6 9.4 113 45-158 6-157 (334)
297 cd05147 RIO1_euk RIO kinase fa 99.7 1.3E-17 2.7E-22 146.0 8.9 106 50-158 3-167 (190)
298 cd07843 STKc_CDC2L1 Catalytic 99.7 9E-18 2E-22 157.1 8.3 114 46-160 7-158 (293)
299 cd05041 PTKc_Fes_like Catalyti 99.7 4.1E-17 8.8E-22 148.9 12.5 108 50-159 1-144 (251)
300 cd08221 STKc_Nek9 Catalytic do 99.7 1.3E-17 2.8E-22 152.6 9.2 113 46-159 2-152 (256)
301 cd05049 PTKc_Trk Catalytic dom 99.7 2.8E-17 6E-22 152.5 11.5 112 46-158 7-172 (280)
302 cd07846 STKc_CDKL2_3 Catalytic 99.7 1.2E-17 2.7E-22 155.4 9.0 111 47-158 4-150 (286)
303 cd07836 STKc_Pho85 Catalytic d 99.7 1.2E-17 2.7E-22 155.2 8.8 111 47-158 3-150 (284)
304 cd05051 PTKc_DDR Catalytic dom 99.7 4.1E-17 8.9E-22 152.7 12.3 113 45-158 6-180 (296)
305 PTZ00024 cyclin-dependent prot 99.7 8.2E-18 1.8E-22 160.6 7.6 116 42-159 6-170 (335)
306 KOG0199|consensus 99.7 2.3E-17 4.9E-22 161.3 10.6 133 49-182 115-312 (1039)
307 KOG0603|consensus 99.7 4.3E-18 9.3E-23 165.6 5.5 168 46-218 324-565 (612)
308 cd05042 PTKc_Aatyk Catalytic d 99.7 3E-17 6.4E-22 151.6 10.9 106 51-157 2-149 (269)
309 cd05047 PTKc_Tie Catalytic dom 99.7 2.5E-17 5.4E-22 152.3 10.4 105 51-156 2-160 (270)
310 cd05572 STKc_cGK_PKG Catalytic 99.7 2.9E-17 6.4E-22 150.9 10.8 107 52-160 1-145 (262)
311 PHA03390 pk1 serine/threonine- 99.7 1.8E-17 3.9E-22 153.2 9.3 124 52-177 24-198 (267)
312 cd05092 PTKc_TrkA Catalytic do 99.7 3.7E-17 8E-22 152.0 11.5 110 48-158 9-172 (280)
313 cd06632 STKc_MEKK1_plant Catal 99.7 2E-17 4.3E-22 151.3 9.6 110 47-158 3-152 (258)
314 cd07880 STKc_p38gamma_MAPK12 C 99.7 1.7E-17 3.7E-22 159.1 9.2 131 44-177 15-208 (343)
315 cd05094 PTKc_TrkC Catalytic do 99.7 5.3E-17 1.1E-21 151.8 12.3 112 46-158 7-173 (291)
316 cd06640 STKc_MST4 Catalytic do 99.7 2.2E-17 4.7E-22 153.3 9.6 111 45-158 5-151 (277)
317 cd07879 STKc_p38delta_MAPK13 C 99.7 1.4E-17 3E-22 159.6 8.5 133 44-177 15-207 (342)
318 cd05613 STKc_MSK1_N N-terminal 99.7 1.6E-17 3.6E-22 155.1 8.8 110 48-159 4-156 (290)
319 cd05074 PTKc_Tyro3 Catalytic d 99.7 3E-17 6.5E-22 151.7 10.3 110 48-158 3-163 (273)
320 cd05097 PTKc_DDR_like Catalyti 99.7 4.5E-17 9.7E-22 152.6 11.6 113 45-158 6-179 (295)
321 cd06605 PKc_MAPKK Catalytic do 99.7 1.8E-17 3.9E-22 152.4 8.5 128 49-177 6-191 (265)
322 cd06648 STKc_PAK_II Catalytic 99.7 2.4E-17 5.1E-22 153.8 9.4 109 47-158 22-165 (285)
323 cd05101 PTKc_FGFR2 Catalytic d 99.7 5E-17 1.1E-21 153.0 11.7 114 45-159 16-188 (304)
324 cd07866 STKc_BUR1 Catalytic do 99.7 1.5E-17 3.2E-22 156.7 8.0 113 45-158 9-165 (311)
325 cd06609 STKc_MST3_like Catalyt 99.7 2.2E-17 4.8E-22 152.9 9.0 111 46-159 3-149 (274)
326 cd06642 STKc_STK25-YSK1 Cataly 99.7 1.5E-17 3.3E-22 154.2 7.9 112 47-159 7-152 (277)
327 PLN00009 cyclin-dependent kina 99.7 3.1E-17 6.8E-22 153.5 9.9 112 46-158 4-153 (294)
328 cd05090 PTKc_Ror1 Catalytic do 99.7 5.4E-17 1.2E-21 151.0 11.3 109 49-158 10-174 (283)
329 cd06627 STKc_Cdc7_like Catalyt 99.7 3.2E-17 7E-22 149.5 9.6 111 48-160 4-151 (254)
330 cd06625 STKc_MEKK3_like Cataly 99.7 6.5E-17 1.4E-21 148.5 11.6 111 46-158 4-154 (263)
331 KOG4645|consensus 99.7 1.6E-17 3.4E-22 172.1 8.2 113 49-162 1240-1388(1509)
332 cd05032 PTKc_InsR_like Catalyt 99.7 1.1E-16 2.4E-21 148.2 13.3 112 46-158 8-169 (277)
333 cd07864 STKc_CDK12 Catalytic d 99.7 2.4E-17 5.1E-22 154.8 8.8 112 46-158 9-166 (302)
334 cd06647 STKc_PAK_I Catalytic d 99.7 2.7E-17 5.9E-22 154.1 9.1 114 44-158 19-165 (293)
335 cd06633 STKc_TAO3 Catalytic do 99.7 5.2E-17 1.1E-21 153.6 11.1 112 45-157 22-170 (313)
336 KOG4278|consensus 99.7 1.7E-17 3.6E-22 160.3 7.6 161 49-211 272-502 (1157)
337 cd07834 STKc_MAPK Catalytic do 99.7 2.8E-17 6E-22 156.5 9.1 113 46-160 2-155 (330)
338 cd05083 PTKc_Chk Catalytic dom 99.7 3.1E-17 6.7E-22 150.1 9.1 107 46-157 8-149 (254)
339 cd05062 PTKc_IGF-1R Catalytic 99.7 6.3E-17 1.4E-21 150.1 11.2 113 45-158 7-169 (277)
340 cd06629 STKc_MAPKKK_Bck1_like 99.7 7.4E-17 1.6E-21 149.1 11.5 111 46-158 3-158 (272)
341 cd06634 STKc_TAO2 Catalytic do 99.7 3.1E-17 6.8E-22 154.8 9.2 132 45-177 16-206 (308)
342 cd05046 PTK_CCK4 Pseudokinase 99.7 4.2E-17 9.2E-22 150.9 9.8 111 47-158 8-167 (275)
343 cd06631 STKc_YSK4 Catalytic do 99.7 5E-17 1.1E-21 149.6 10.2 109 47-158 3-152 (265)
344 cd06657 STKc_PAK4 Catalytic do 99.7 4.2E-17 9.1E-22 152.8 9.8 109 49-158 25-166 (292)
345 cd08220 STKc_Nek8 Catalytic do 99.7 3.9E-17 8.5E-22 149.3 9.3 113 46-159 2-153 (256)
346 cd07840 STKc_CDK9_like Catalyt 99.7 3.2E-17 7E-22 152.3 8.6 110 49-159 4-151 (287)
347 cd08217 STKc_Nek2 Catalytic do 99.7 3.8E-17 8.2E-22 149.9 8.9 112 48-160 4-162 (265)
348 cd05098 PTKc_FGFR1 Catalytic d 99.7 9.4E-17 2E-21 151.4 11.7 114 44-158 18-190 (307)
349 cd05112 PTKc_Itk Catalytic dom 99.7 5.9E-17 1.3E-21 148.3 10.0 107 49-158 9-150 (256)
350 cd07829 STKc_CDK_like Catalyti 99.7 5E-17 1.1E-21 150.8 9.6 109 49-158 4-148 (282)
351 cd07838 STKc_CDK4_6_like Catal 99.7 5.1E-17 1.1E-21 151.1 9.5 110 48-158 3-157 (287)
352 cd08215 STKc_Nek Catalytic dom 99.7 1E-16 2.2E-21 146.3 11.3 111 48-159 4-154 (258)
353 smart00219 TyrKc Tyrosine kina 99.7 1E-16 2.2E-21 146.5 11.2 110 49-159 4-154 (258)
354 cd06618 PKc_MKK7 Catalytic dom 99.7 4.5E-17 9.7E-22 152.7 9.0 111 47-158 18-165 (296)
355 cd05087 PTKc_Aatyk1_Aatyk3 Cat 99.7 1.2E-16 2.7E-21 147.5 11.7 107 50-157 1-149 (269)
356 cd06641 STKc_MST3 Catalytic do 99.7 3.9E-17 8.5E-22 151.5 8.3 111 45-158 5-151 (277)
357 cd05145 RIO1_like RIO kinase f 99.7 9.3E-17 2E-21 140.8 10.2 109 49-160 2-169 (190)
358 cd05045 PTKc_RET Catalytic dom 99.7 2.9E-16 6.2E-21 146.7 14.1 129 48-177 4-221 (290)
359 cd05095 PTKc_DDR2 Catalytic do 99.7 9.2E-17 2E-21 150.6 10.7 113 45-158 6-180 (296)
360 KOG4257|consensus 99.7 2.5E-17 5.5E-22 159.2 6.9 131 46-177 391-584 (974)
361 cd07842 STKc_CDK8_like Catalyt 99.7 7.7E-17 1.7E-21 152.2 10.2 111 48-159 4-163 (316)
362 cd05107 PTKc_PDGFR_beta Cataly 99.7 1.5E-16 3.3E-21 155.3 12.5 54 104-158 236-289 (401)
363 cd07835 STKc_CDK1_like Catalyt 99.7 5.3E-17 1.1E-21 151.0 8.9 109 49-158 4-149 (283)
364 cd06636 STKc_MAP4K4_6 Catalyti 99.7 8.8E-17 1.9E-21 149.5 10.2 113 44-158 16-171 (282)
365 cd05100 PTKc_FGFR3 Catalytic d 99.7 1.8E-16 3.9E-21 151.3 12.7 113 45-158 13-184 (334)
366 PHA03210 serine/threonine kina 99.7 3.1E-17 6.7E-22 164.9 7.7 115 44-159 148-318 (501)
367 cd05055 PTKc_PDGFR Catalytic d 99.7 1.4E-16 3E-21 149.9 11.7 113 45-158 36-191 (302)
368 cd06608 STKc_myosinIII_like Ca 99.7 9.4E-17 2E-21 148.2 10.3 113 44-158 6-163 (275)
369 cd05061 PTKc_InsR Catalytic do 99.7 1.5E-16 3.3E-21 148.5 11.8 113 45-158 7-169 (288)
370 cd05043 PTK_Ryk Pseudokinase d 99.7 1.6E-16 3.4E-21 147.6 11.8 113 45-158 7-167 (280)
371 cd06638 STKc_myosinIIIA Cataly 99.7 9.3E-17 2E-21 149.5 10.0 113 44-158 18-174 (286)
372 cd06639 STKc_myosinIIIB Cataly 99.7 8.5E-17 1.8E-21 150.3 9.7 112 45-158 23-178 (291)
373 cd05099 PTKc_FGFR4 Catalytic d 99.7 1.8E-16 4E-21 149.9 11.9 114 44-158 12-184 (314)
374 cd06614 STKc_PAK Catalytic dom 99.7 1.1E-16 2.5E-21 149.1 10.2 114 43-158 18-166 (286)
375 cd05036 PTKc_ALK_LTK Catalytic 99.7 1.7E-16 3.7E-21 147.2 11.2 112 46-158 8-169 (277)
376 cd08227 PK_STRAD_alpha Pseudok 99.7 1.9E-16 4.1E-21 150.8 11.8 105 50-155 4-148 (327)
377 cd05581 STKc_PDK1 Catalytic do 99.7 1.4E-16 3E-21 147.6 10.4 112 46-159 3-153 (280)
378 cd08218 STKc_Nek1 Catalytic do 99.7 7.1E-17 1.5E-21 147.7 8.3 112 46-158 2-151 (256)
379 cd05610 STKc_MASTL Catalytic d 99.7 1.4E-16 3.1E-21 165.2 11.3 113 46-159 6-155 (669)
380 cd07851 STKc_p38 Catalytic dom 99.7 1E-16 2.2E-21 153.6 9.4 133 44-177 15-208 (343)
381 cd06620 PKc_MAPKK_Byr1_like Ca 99.7 9.5E-17 2.1E-21 149.5 8.6 111 47-158 8-154 (284)
382 cd05050 PTKc_Musk Catalytic do 99.7 2.3E-16 5E-21 147.2 11.1 112 46-158 7-180 (288)
383 cd06917 STKc_NAK1_like Catalyt 99.7 2.6E-16 5.7E-21 145.8 11.3 110 47-159 4-152 (277)
384 cd06621 PKc_MAPKK_Pek1_like Ca 99.7 1.8E-16 4E-21 147.9 10.2 130 47-177 4-195 (287)
385 cd05576 STKc_RPK118_like Catal 99.7 9.1E-17 2E-21 145.7 7.7 104 55-159 4-136 (237)
386 cd05118 STKc_CMGC Catalytic do 99.7 1.8E-16 3.8E-21 147.2 9.8 111 49-160 4-150 (283)
387 PLN03224 probable serine/threo 99.7 3.4E-16 7.3E-21 155.5 12.2 75 104-180 306-380 (507)
388 cd05086 PTKc_Aatyk2 Catalytic 99.7 5.2E-16 1.1E-20 143.3 12.8 106 51-157 2-148 (268)
389 cd06610 STKc_OSR1_SPAK Catalyt 99.7 3.6E-16 7.8E-21 143.7 11.6 113 47-160 4-154 (267)
390 cd05123 STKc_AGC Catalytic dom 99.7 2.6E-16 5.7E-21 143.3 10.4 106 52-159 1-144 (250)
391 cd08528 STKc_Nek10 Catalytic d 99.7 2.9E-16 6.3E-21 144.9 10.7 129 48-177 4-205 (269)
392 cd07830 STKc_MAK_like Catalyti 99.7 2.5E-16 5.3E-21 146.4 10.2 111 48-159 3-150 (283)
393 cd08225 STKc_Nek5 Catalytic do 99.7 1.5E-16 3.3E-21 145.5 8.7 112 47-159 3-153 (257)
394 KOG0596|consensus 99.7 6.2E-17 1.3E-21 154.8 6.0 154 45-201 362-567 (677)
395 cd07852 STKc_MAPK15 Catalytic 99.7 3.9E-16 8.5E-21 149.1 10.8 113 43-158 6-157 (337)
396 cd05044 PTKc_c-ros Catalytic d 99.7 3.7E-16 8.1E-21 144.0 9.8 108 50-158 1-161 (269)
397 cd08530 STKc_CNK2-like Catalyt 99.7 4E-16 8.7E-21 142.5 9.9 113 47-160 3-155 (256)
398 cd07856 STKc_Sty1_Hog1 Catalyt 99.7 7.7E-16 1.7E-20 146.7 12.2 116 42-158 8-158 (328)
399 KOG0695|consensus 99.7 5.3E-17 1.1E-21 146.7 3.7 152 46-200 252-445 (593)
400 cd05583 STKc_MSK_N N-terminal 99.7 2.7E-16 5.9E-21 146.7 8.7 109 49-158 5-155 (288)
401 KOG0665|consensus 99.6 1.6E-16 3.6E-21 142.8 5.8 133 43-177 16-209 (369)
402 KOG1163|consensus 99.6 7.9E-16 1.7E-20 133.5 9.6 115 43-160 14-166 (341)
403 cd06606 STKc_MAPKKK Catalytic 99.6 1.3E-15 2.9E-20 138.8 11.1 112 48-161 4-154 (260)
404 cd08226 PK_STRAD_beta Pseudoki 99.6 1.5E-15 3.2E-20 144.7 11.7 103 52-155 6-148 (328)
405 cd08216 PK_STRAD Pseudokinase 99.6 1.2E-15 2.6E-20 144.1 9.8 101 56-157 12-150 (314)
406 KOG1027|consensus 99.6 1.7E-16 3.7E-21 158.2 4.0 125 47-177 512-706 (903)
407 KOG1165|consensus 99.6 7.9E-15 1.7E-19 132.7 12.2 114 46-162 30-183 (449)
408 smart00090 RIO RIO-like kinase 99.6 5.4E-15 1.2E-19 133.8 10.0 113 46-160 30-200 (237)
409 KOG0587|consensus 99.6 7.5E-15 1.6E-19 147.4 11.1 132 44-177 19-220 (953)
410 KOG0200|consensus 99.6 8.5E-15 1.8E-19 150.0 11.8 128 49-177 301-513 (609)
411 cd08222 STKc_Nek11 Catalytic d 99.6 5E-15 1.1E-19 135.9 8.8 111 46-158 2-155 (260)
412 smart00221 STYKc Protein kinas 99.6 8.9E-15 1.9E-19 130.6 9.4 111 49-160 4-150 (225)
413 cd00180 PKc Catalytic domain o 99.5 2.2E-14 4.8E-19 125.9 10.0 108 52-160 1-145 (215)
414 KOG1167|consensus 99.5 5.1E-15 1.1E-19 137.8 6.1 111 43-156 35-181 (418)
415 PRK10359 lipopolysaccharide co 99.5 1.1E-14 2.4E-19 129.6 7.5 132 42-177 29-214 (232)
416 smart00220 S_TKc Serine/Threon 99.5 7.2E-14 1.6E-18 125.8 10.9 120 56-177 1-178 (244)
417 cd05144 RIO2_C RIO kinase fami 99.5 1.2E-13 2.7E-18 121.8 9.8 113 46-160 17-177 (198)
418 PRK10345 hypothetical protein; 99.5 1.5E-13 3.3E-18 121.6 9.7 101 49-157 7-159 (210)
419 KOG0576|consensus 99.5 1.1E-14 2.5E-19 142.1 2.3 135 45-180 16-210 (829)
420 PLN00113 leucine-rich repeat r 99.5 6.7E-14 1.5E-18 151.9 8.3 128 48-177 694-870 (968)
421 KOG1164|consensus 99.5 1.8E-13 3.8E-18 130.0 9.0 112 45-157 19-176 (322)
422 cd05119 RIO RIO kinase family, 99.4 2.8E-13 6E-18 118.2 8.6 108 50-160 3-166 (187)
423 PRK12274 serine/threonine prot 99.4 7.2E-13 1.6E-17 115.7 9.4 107 49-159 7-143 (218)
424 PRK14879 serine/threonine prot 99.4 1.3E-12 2.7E-17 116.3 10.3 104 50-158 2-144 (211)
425 KOG1290|consensus 99.4 1.7E-12 3.6E-17 123.1 10.5 100 43-144 77-224 (590)
426 TIGR03724 arch_bud32 Kae1-asso 99.4 9.4E-13 2E-17 116.1 8.0 104 52-159 2-140 (199)
427 PRK09605 bifunctional UGMP fam 99.4 1.2E-12 2.6E-17 132.7 8.6 120 34-159 323-478 (535)
428 KOG1024|consensus 99.3 5.3E-13 1.2E-17 123.3 4.0 197 44-257 284-561 (563)
429 PLN00181 protein SPA1-RELATED; 99.3 4.9E-12 1.1E-16 134.3 7.7 61 96-157 69-148 (793)
430 PF14531 Kinase-like: Kinase-l 99.2 1.1E-11 2.5E-16 113.6 7.0 110 47-157 15-194 (288)
431 KOG1166|consensus 99.2 3.1E-11 6.7E-16 125.8 10.4 161 43-206 697-903 (974)
432 cd07556 Nucleotidyl_cyc_III Cl 99.2 6.1E-10 1.3E-14 91.0 14.9 130 222-391 2-131 (133)
433 PRK01723 3-deoxy-D-manno-octul 99.2 9.9E-11 2.1E-15 106.2 10.5 47 112-159 147-193 (239)
434 KOG0590|consensus 99.2 2.8E-11 6E-16 123.1 5.5 110 48-158 322-470 (601)
435 COG0515 SPS1 Serine/threonine 99.1 3.5E-10 7.6E-15 105.6 10.7 129 48-180 4-178 (384)
436 KOG4158|consensus 99.1 7.4E-10 1.6E-14 103.1 11.1 52 104-156 338-393 (598)
437 cd05120 APH_ChoK_like Aminogly 99.1 6.6E-10 1.4E-14 92.5 9.9 105 49-158 3-139 (155)
438 smart00750 KIND kinase non-cat 99.1 1.1E-10 2.3E-15 100.7 4.4 73 96-177 6-96 (176)
439 TIGR01982 UbiB 2-polyprenylphe 99.1 6.4E-10 1.4E-14 109.6 9.8 49 111-160 260-309 (437)
440 KOG0606|consensus 99.0 9.8E-11 2.1E-15 120.5 3.5 96 48-158 87-193 (1205)
441 PRK04750 ubiB putative ubiquin 99.0 1E-09 2.3E-14 109.6 8.1 38 123-161 276-317 (537)
442 KOG0603|consensus 99.0 7.4E-11 1.6E-15 115.6 -0.1 125 52-177 2-183 (612)
443 cd05151 ChoK Choline Kinase (C 98.9 4.2E-09 9E-14 90.1 7.9 103 49-157 3-136 (170)
444 KOG1240|consensus 98.9 1.1E-09 2.4E-14 113.2 2.9 106 48-156 27-168 (1431)
445 cd05146 RIO3_euk RIO kinase fa 98.7 6E-08 1.3E-12 84.6 9.6 53 104-158 121-174 (197)
446 KOG1033|consensus 98.7 4.1E-09 8.9E-14 101.6 0.9 95 103-201 355-457 (516)
447 KOG3087|consensus 98.5 1.6E-06 3.4E-11 73.5 10.7 120 49-171 12-179 (229)
448 COG3642 Mn2+-dependent serine/ 98.4 5.2E-07 1.1E-11 76.6 6.7 116 51-170 3-153 (204)
449 KOG0590|consensus 98.3 9.7E-08 2.1E-12 97.4 -0.1 116 44-160 20-177 (601)
450 PRK15123 lipopolysaccharide co 98.1 2.7E-05 5.8E-10 71.7 11.9 53 104-157 135-194 (268)
451 PF01163 RIO1: RIO1 family; I 98.0 2.9E-05 6.3E-10 67.5 8.2 52 106-159 105-157 (188)
452 KOG0601|consensus 98.0 3.3E-06 7.1E-11 83.2 1.9 119 43-162 113-277 (524)
453 KOG1243|consensus 97.9 6.9E-06 1.5E-10 82.0 3.3 119 13-177 55-195 (690)
454 cd05154 ACAD10_11_like Acyl-Co 97.9 6.2E-05 1.3E-09 66.9 9.3 108 49-157 3-206 (223)
455 KOG0601|consensus 97.9 1.2E-05 2.5E-10 79.3 4.5 107 49-156 270-415 (524)
456 COG0661 AarF Predicted unusual 97.8 7.6E-05 1.6E-09 74.6 8.9 37 125-162 283-319 (517)
457 PF06293 Kdo: Lipopolysacchari 97.7 6.2E-05 1.3E-09 66.7 5.6 55 104-159 115-172 (206)
458 COG0478 RIO-like serine/threon 97.7 0.00029 6.3E-09 63.7 9.5 108 46-155 93-249 (304)
459 PRK09902 hypothetical protein; 97.5 0.0012 2.6E-08 58.1 10.7 103 52-157 26-179 (216)
460 KOG1266|consensus 97.4 0.00022 4.9E-09 65.7 4.9 99 21-150 121-220 (458)
461 KOG0195|consensus 97.2 0.00039 8.5E-09 62.4 3.8 135 12-185 232-391 (448)
462 PF06176 WaaY: Lipopolysacchar 97.1 0.0022 4.7E-08 56.8 8.0 44 112-157 140-183 (229)
463 COG1718 RIO1 Serine/threonine 97.1 0.0023 5.1E-08 57.3 8.2 107 49-158 53-216 (268)
464 KOG1235|consensus 96.9 0.0072 1.6E-07 60.6 10.8 55 104-161 300-358 (538)
465 KOG3741|consensus 96.9 0.0049 1.1E-07 60.5 8.6 60 102-162 388-447 (655)
466 KOG2137|consensus 96.5 0.0027 5.8E-08 64.2 4.5 54 106-160 98-152 (700)
467 COG2112 Predicted Ser/Thr prot 96.4 0.035 7.7E-07 47.3 9.7 103 49-158 27-156 (201)
468 TIGR02172 Fb_sc_TIGR02172 Fibr 96.4 0.026 5.6E-07 50.7 9.5 28 129-157 155-182 (226)
469 PF13095 FTA2: Kinetochore Sim 95.7 0.043 9.2E-07 48.0 7.3 38 112-155 169-206 (207)
470 KOG1035|consensus 95.7 0.0026 5.5E-08 68.0 -0.5 30 12-41 522-551 (1351)
471 COG4248 Uncharacterized protei 95.6 0.064 1.4E-06 51.7 8.5 48 103-151 113-160 (637)
472 PF01636 APH: Phosphotransfera 95.4 0.036 7.9E-07 49.2 6.2 29 129-157 168-197 (239)
473 KOG0578|consensus 95.2 0.0067 1.4E-07 59.8 0.8 28 12-39 315-342 (550)
474 TIGR02721 ycfN_thiK thiamine k 95.1 0.066 1.4E-06 48.9 6.9 28 129-157 148-175 (256)
475 PF10707 YrbL-PhoP_reg: PhoP r 94.7 0.35 7.5E-06 42.4 10.0 38 119-157 130-172 (199)
476 PRK05231 homoserine kinase; Pr 94.5 0.35 7.7E-06 45.6 10.6 30 126-156 187-216 (319)
477 PF05165 GGDN: GGDN family; I 94.2 0.5 1.1E-05 42.4 9.8 59 220-278 126-185 (246)
478 KOG0606|consensus 93.0 0.045 9.8E-07 58.2 1.5 107 49-156 809-952 (1205)
479 KOG0591|consensus 92.8 0.012 2.6E-07 53.4 -2.5 28 12-39 63-91 (375)
480 KOG0575|consensus 92.8 0.051 1.1E-06 54.2 1.5 29 12-40 63-91 (592)
481 PF12260 PIP49_C: Protein-kina 92.5 0.21 4.6E-06 43.4 4.9 56 103-158 55-112 (188)
482 KOG0193|consensus 92.3 0.11 2.3E-06 52.2 2.9 29 11-39 432-460 (678)
483 PRK09550 mtnK methylthioribose 92.2 1.3 2.8E-05 43.3 10.3 29 126-156 223-251 (401)
484 TIGR00938 thrB_alt homoserine 92.1 0.25 5.3E-06 46.5 5.2 30 126-156 187-216 (307)
485 KOG0582|consensus 92.0 0.048 1E-06 52.6 0.2 29 11-39 68-96 (516)
486 cd05155 APH_ChoK_like_1 Unchar 91.6 0.2 4.3E-06 45.1 3.8 29 129-157 166-194 (235)
487 cd05157 ETNK_euk Ethanolamine 91.6 0.28 6E-06 44.0 4.7 29 129-157 172-201 (235)
488 TIGR02906 spore_CotS spore coa 91.4 0.36 7.8E-06 45.3 5.4 29 126-156 187-215 (313)
489 PHA03111 Ser/Thr kinase; Provi 91.3 0.25 5.4E-06 46.4 4.0 36 109-144 281-319 (444)
490 PRK10271 thiK thiamine kinase; 91.2 0.16 3.6E-06 43.9 2.7 28 129-157 79-106 (188)
491 PF05445 Pox_ser-thr_kin: Poxv 91.1 0.23 5E-06 46.9 3.6 33 109-143 277-314 (434)
492 cd05156 ChoK_euk Choline Kinas 91.1 0.39 8.5E-06 44.9 5.4 29 129-157 181-213 (302)
493 cd05153 HomoserineK_II Homoser 90.6 0.4 8.6E-06 44.7 4.9 30 127-157 176-205 (296)
494 COG5072 ALK1 Serine/threonine 90.5 0.5 1.1E-05 45.1 5.2 54 104-158 318-371 (488)
495 PF01633 Choline_kinase: Choli 90.5 0.34 7.4E-06 42.7 4.1 29 129-157 145-174 (211)
496 KOG0192|consensus 90.4 0.093 2E-06 50.5 0.4 30 11-40 83-112 (362)
497 PRK10245 adrA diguanylate cycl 89.9 2.7 5.9E-05 40.6 10.1 58 220-278 235-292 (366)
498 cd05150 APH Aminoglycoside 3'- 89.9 0.25 5.4E-06 44.6 2.8 29 129-157 165-193 (244)
499 COG0510 ycfN Thiamine kinase a 89.6 0.61 1.3E-05 43.0 5.1 49 109-157 134-183 (269)
500 KOG0615|consensus 89.4 0.11 2.4E-06 49.7 0.1 28 12-39 221-248 (475)
No 1
>KOG1023|consensus
Probab=100.00 E-value=4.1e-40 Score=317.94 Aligned_cols=264 Identities=62% Similarity=0.985 Sum_probs=226.8
Q ss_pred HhhcCCcCCCHHHHHHHHHHHHHHHHHHhcCCcccccCCCCCceEEcCCceEEEeccccchhcccc--------------
Q psy6828 96 IMENEDVKLDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLVDSRWVVKLADFGLTEFKRDA-------------- 161 (392)
Q Consensus 96 ~l~~~~~~l~~~~~~~i~~qi~~~l~ylH~~~iiiHrDlKp~NIll~~~~~~kl~DFGla~~~~~~-------------- 161 (392)
.+.+...++++.....++++|+.||.|+|+..+..|+-+++.|++++....+|++|||+.......
T Consensus 37 ~i~~~~~~~d~~F~~s~~rdi~~Gl~ylh~s~i~~hg~l~s~nClvd~~w~lklt~~Gl~~~~~~~~~~~~~~~~~~~~l 116 (484)
T KOG1023|consen 37 ILSNEDIKLDYFFILSFIRDISKGLAYLHNSPIGYHGALKSSNCLVDSRWVLKLTDFGLNSLLEETAEPEAHHPIRKALL 116 (484)
T ss_pred HHhccccCccHHHHHHHHHHHHHHHHHHhcCcceeeeeeccccceeeeeEEEEechhhhcccccccccccccchhHHHHh
Confidence 344555679999999999999999999998877689999999999999999999999998766310
Q ss_pred ------------------ccccccccceeeeeee--ccCCCCcc-----c----------------------c----c--
Q psy6828 162 ------------------EYTGTDQHSFLQHTYH--VNRAGSTE-----S----------------------L----H-- 188 (392)
Q Consensus 162 ------------------~~~~~d~~s~g~~~~~--~~~~~~~~-----~----------------------~----d-- 188 (392)
.....|+||||+++|| .+..++.. . . +
T Consensus 117 w~aPellr~~~~~~~~~~~~~~gdiYs~~ii~~ei~~r~~~~~~~~~~~~~~eii~~~~~~~~~~~rP~i~~~~e~~~~l 196 (484)
T KOG1023|consen 117 WTAPELLRGALSQSLESALTQKGDIYSFGIIMYEILFRSGPFDLRNLVEDPDEIILRVKKGGSNPFRPSIELLNELPPEL 196 (484)
T ss_pred ccCHHHhcccccccccccccccCCeehHHHHHHHHHhccCccccccccCChHHHHHHHHhcCCCCcCcchhhhhhcchHH
Confidence 0112499999999999 11110000 0 0 0
Q ss_pred ------c-------------------------------------------------------------cccchhhhccCC
Q psy6828 189 ------C-------------------------------------------------------------KCDEALLFEMLP 201 (392)
Q Consensus 189 ------~-------------------------------------------------------------~~~~~lL~~~lp 201 (392)
| .+...++.+++|
T Consensus 197 ~~l~~~cw~e~P~~rPs~~~i~~~~~~~~~~~~~~~nl~D~m~~~le~Y~~nLe~~v~eRt~~l~~e~~k~d~LL~~mLP 276 (484)
T KOG1023|consen 197 LLLVARCWEEIPEKRPSIEQIRSKLLTINKGGSSKGNLMDSLFRMLESYADNLEKLVDERTAELEEEKKKTDTLLGQMLP 276 (484)
T ss_pred HHHHHHhcccChhhCccHHHHHhhhhhhcccccccchhHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHhcC
Confidence 0 344568999999
Q ss_pred HHHHHHhhcCCCccccccCceEEEeecccchhhhhccCChhhHHHhHHHHHHHHHHhhhhcCeEEEeeeCceeeeccCCC
Q psy6828 202 RSVAEQLRRGTSVEAESFDSVTIYFSDIVGFTAMSAESTPLQVVDFLNDLYTCFDSIVGNYDVYKVETIGDAYMVVSGLP 281 (392)
Q Consensus 202 ~~v~~~l~~~~~~~~~~~~~vtvlf~DI~~ft~l~~~~~p~~l~~~Ln~~~~~~~~~v~~~~g~~~~~~Gd~~~a~~g~~ 281 (392)
+.+++.++.+....++.+..+|++|+|+++||.++...+|-+++.+||++|+.|+.++++|++++++++||+||.+
T Consensus 277 ~~VA~~lk~G~~v~pe~~~~vti~fsDiv~fT~l~~~~~P~~vv~~lNdlyt~Fd~ii~~~d~yKVetiGDaYmvv---- 352 (484)
T KOG1023|consen 277 KSVAESLKLGKTVDPESFDSVTIYFSDIVGFTVLSSNSTPIQVVTLLNDLYTTFDRIIDKHDVYKVETIGDAYMVV---- 352 (484)
T ss_pred HHHhhHhhcCCcCCccccCceeeeeHHHHHHHHHHhcCCCceeeeeccchHHhhhhcccccCCeeEeccCcceeec----
Confidence 9999999999999999999999999999999999999999999999999999999999999999999888888544
Q ss_pred cCCCCccccccccccceeeccceeEEEeCCCCCCChhhHHHHHHHHHHHHHHHHHhcccCCCCCCceEEEEeeccceeEe
Q psy6828 282 IRNGEQHAVGNYDVYKVETIGDAYMVVSGLPIRNGEQHAGEIASMSLDLLEAVKRFTVRHRPHDDLKLRIGIHSGPVCAG 361 (392)
Q Consensus 282 ~~~~~~~~~~~~~~~~~~~~~d~~~~~~g~~~~~~~~~a~~a~~~a~~~~~~~~~~~~~~~~~~~~~~~iGi~~G~v~~g 361 (392)
+|+|.+....|+..++.+++.++..+..+.....++.++++|||+|+|++++|
T Consensus 353 ---------------------------Sglp~~n~~~H~~eia~msl~~~~~~~~f~i~H~P~~~l~iRig~~sg~~~ag 405 (484)
T KOG1023|consen 353 ---------------------------SGLPIRNGYRHAREIASMALGLRSFLESFSLPHRPWEKLRLRIGFHSGPVVAG 405 (484)
T ss_pred ---------------------------ccCceecHhHHHHHHHHHHHHHHHHHhccCCCCCCchhhheeeccccCCceec
Confidence 55555555669999999999999999999998889999999999999999999
Q ss_pred eeccCCceeeeecchHHHHHhhhhcCCCCC
Q psy6828 362 VVGLKMPRYCLFGDTVNTASRMESTGEDVV 391 (392)
Q Consensus 362 ~iG~~~~~y~~~G~~Vn~AsRle~~~~~g~ 391 (392)
++|.+.+.|+.+|||||+||||||.++ ++
T Consensus 406 Vvgl~mPRYclFgDtvn~AsrMes~G~-~~ 434 (484)
T KOG1023|consen 406 VVGLKMPRYCLFGDTVNTASRMESNGK-LM 434 (484)
T ss_pred ccccCCCcccchhhHHHHHhhhhhcCC-eE
Confidence 999999999999999999999999998 53
No 2
>KOG4171|consensus
Probab=100.00 E-value=7.3e-36 Score=291.08 Aligned_cols=169 Identities=61% Similarity=0.961 Sum_probs=155.0
Q ss_pred cccchhhhccCCHHHHHHhhcCCCccccccCceEEEeecccchhhhhccCChhhHHHhHHHHHHHHHHhhhhcCeEEEee
Q psy6828 190 KCDEALLFEMLPRSVAEQLRRGTSVEAESFDSVTIYFSDIVGFTAMSAESTPLQVVDFLNDLYTCFDSIVGNYDVYKVET 269 (392)
Q Consensus 190 ~~~~~lL~~~lp~~v~~~l~~~~~~~~~~~~~vtvlf~DI~~ft~l~~~~~p~~l~~~Ln~~~~~~~~~v~~~~g~~~~~ 269 (392)
++...+|++++|+.++++++.+......++.++|++|+||++|+.++..++|-+++.+||++|.+||+++.-|+++++++
T Consensus 411 kkTd~LLy~mlP~~VA~qLr~g~~v~a~~f~~vTilFsdIv~Ft~ic~~ctp~~vV~~LN~lyt~fD~~i~~~~VYKVET 490 (671)
T KOG4171|consen 411 KKTDTLLYSMLPRSVAQQLRQGESVDAKEFDDVTILFSDIVGFTAICSQCTPMQVVNMLNELYTRFDRIIDTHDVYKVET 490 (671)
T ss_pred hhHHHHHHHhCCHHHHHHHHcCCCcCccccCceEEEEeccchHHhHhhccCcHHHHHHHHHHHHHHHHhhcccCeEEEee
Confidence 56788999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred eCceeeeccCCCcCCCCccccccccccceeeccceeEEEeCCCCCCChhhHHHHHHHHHHHHHHHHHhcccCCCCCCceE
Q psy6828 270 IGDAYMVVSGLPIRNGEQHAVGNYDVYKVETIGDAYMVVSGLPIRNGEQHAGEIASMSLDLLEAVKRFTVRHRPHDDLKL 349 (392)
Q Consensus 270 ~Gd~~~a~~g~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~g~~~~~~~~~a~~a~~~a~~~~~~~~~~~~~~~~~~~~~~ 349 (392)
|||+||++.|+| ... +.||..++.+|+.|+...+++-... ...++.+
T Consensus 491 IGDaYm~vsG~P-------------------------------~~~-~~HAe~i~~~AL~Mm~~ak~v~~p~-~~~pi~i 537 (671)
T KOG4171|consen 491 IGDAYMVVSGLP-------------------------------DAS-DYHAEHIADLALGMMEEAKEVVSPV-TGEPIQI 537 (671)
T ss_pred ccchheeecCCC-------------------------------CCC-hhHHHHHHHHHHHHHHHhhhhcCcC-CCCceEE
Confidence 988886666665 333 4699999999999999999875332 4679999
Q ss_pred EEEeeccceeEeeeccCCceeeeecchHHHHHhhhhcCCCCC
Q psy6828 350 RIGIHSGPVCAGVVGLKMPRYCLFGDTVNTASRMESTGEDVV 391 (392)
Q Consensus 350 ~iGi~~G~v~~g~iG~~~~~y~~~G~~Vn~AsRle~~~~~g~ 391 (392)
|||||+|+|++||||.+.|.|+++|||||+||||||.+.||.
T Consensus 538 RiGIHsG~VvAGVVG~kmPRYCLFGdTVn~AsrmES~s~p~K 579 (671)
T KOG4171|consen 538 RIGIHSGPVVAGVVGVKMPRYCLFGDTVNLASRMESSSVPGK 579 (671)
T ss_pred EEEeccCCeeeeeecccccceeecCCchhhhhhhhcCCCCce
Confidence 999999999999999999999999999999999999999985
No 3
>smart00044 CYCc Adenylyl- / guanylyl cyclase, catalytic domain. Present in two copies in mammalian adenylyl cyclases. Eubacterial homologues are known. Two residues (Asn, Arg) are thought to be involved in catalysis. These cyclases have important roles in a diverse range of cellular processes.
Probab=99.96 E-value=9e-29 Score=217.84 Aligned_cols=170 Identities=58% Similarity=0.896 Sum_probs=153.1
Q ss_pred cccchhhhccCCHHHHHHhhcCC-CccccccCceEEEeecccchhhhhccCChhhHHHhHHHHHHHHHHhhhhcCeEEEe
Q psy6828 190 KCDEALLFEMLPRSVAEQLRRGT-SVEAESFDSVTIYFSDIVGFTAMSAESTPLQVVDFLNDLYTCFDSIVGNYDVYKVE 268 (392)
Q Consensus 190 ~~~~~lL~~~lp~~v~~~l~~~~-~~~~~~~~~vtvlf~DI~~ft~l~~~~~p~~l~~~Ln~~~~~~~~~v~~~~g~~~~ 268 (392)
+...++|.+++|+.+.+++..+. ....+...+++++|+||++||.+++..+|+++.++|+.+++.+.+++.+|+|++++
T Consensus 4 ~~~~~ll~~~lP~~v~~~l~~g~~~~~~~~~~~~tvlf~di~g~t~l~~~~~~~~~~~~l~~~~~~~~~~i~~~gg~v~~ 83 (194)
T smart00044 4 RKTDRLLDQLLPASVAESLKRGGSPVPAESYDNVTILFTDIVGFTTLSSEATPEQVVTLLNDLYSRFDRIIDRHGGYKVK 83 (194)
T ss_pred HHHHHHHHHhCCHHHHHHHHhCCCCccccccCeEEEEEeEhhhhhhhhhhCCHHHHHHHHHHHHHHHHHHHHhcCeEEEE
Confidence 45678999999999999999876 55667789999999999999999999999999999999999999999999999999
Q ss_pred eeCceeeeccCCCcCCCCccccccccccceeeccceeEEEeCCCCCCChhhHHHHHHHHHHHHHHHHHhcccCCCCCCce
Q psy6828 269 TIGDAYMVVSGLPIRNGEQHAVGNYDVYKVETIGDAYMVVSGLPIRNGEQHAGEIASMSLDLLEAVKRFTVRHRPHDDLK 348 (392)
Q Consensus 269 ~~Gd~~~a~~g~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~g~~~~~~~~~a~~a~~~a~~~~~~~~~~~~~~~~~~~~~ 348 (392)
++||++|++||.|.. ..++|+.+|+.+|+++++.+.+++... ...+++
T Consensus 84 ~~Gd~~l~~F~~~~~-------------------------------~~~~~a~~a~~~al~l~~~~~~~~~~~-~~~~l~ 131 (194)
T smart00044 84 TIGDAYMVVSGLPTE-------------------------------ALVDHAELAADEALDMVESLKTVLSQH-RGNGLR 131 (194)
T ss_pred EeCCEEEEEECCCCC-------------------------------cchHHHHHHHHHHHHHHHHHHHHHhhc-cCCCee
Confidence 999999888887742 113699999999999999999886433 367899
Q ss_pred EEEEeeccceeEeeeccCCceeeeecchHHHHHhhhhcCCCCC
Q psy6828 349 LRIGIHSGPVCAGVVGLKMPRYCLFGDTVNTASRMESTGEDVV 391 (392)
Q Consensus 349 ~~iGi~~G~v~~g~iG~~~~~y~~~G~~Vn~AsRle~~~~~g~ 391 (392)
+|||||+|+|++|.+|..+++||++|++||+|+||++.+++|.
T Consensus 132 ~riGih~G~v~~~~~g~~~~~~~~~G~~vn~AarL~~~a~~g~ 174 (194)
T smart00044 132 VRIGIHTGPVVAGVVGITMPRYCLFGDTVNLASRMESVGDPGQ 174 (194)
T ss_pred EEEEEeccceEEEecCCCCceeEEeChHHHHHHHHHhcCCCCe
Confidence 9999999999999999988899999999999999999999884
No 4
>PF00211 Guanylate_cyc: Adenylate and Guanylate cyclase catalytic domain; InterPro: IPR001054 Guanylate cyclases (4.6.1.2 from EC) catalyse the formation of cyclic GMP (cGMP) from GTP. cGMP acts as an intracellular messenger, activating cGMP-dependent kinases and regulating cGMP-sensitive ion channels. The role of cGMP as a second messenger in vascular smooth muscle relaxation and retinal photo-transduction is well established. Guanylate cyclase is found both in the soluble and particulate fractions of eukaryotic cells. The soluble and plasma membrane-bound forms differ in structure, regulation and other properties [, , , ]. Most currently known plasma membrane-bound forms are receptors for small polypeptides. The soluble forms of guanylate cyclase are cytoplasmic heterodimers having alpha and beta subunits. In all characterised eukaryote guanylyl- and adenylyl cyclases, cyclic nucleotide synthesis is carried out by the conserved class III cyclase domain. ; GO: 0016849 phosphorus-oxygen lyase activity, 0009190 cyclic nucleotide biosynthetic process, 0035556 intracellular signal transduction; PDB: 3UVJ_A 1FX4_A 1WC4_B 2BW7_D 1WC1_A 1WC0_A 1WC3_A 1WC5_A 1WC6_A 3ET6_B ....
Probab=99.96 E-value=1.5e-28 Score=214.60 Aligned_cols=143 Identities=41% Similarity=0.657 Sum_probs=128.2
Q ss_pred cccccCceEEEeecccchhhhhccCChhhHHHhHHHHHHHHHHhhhhcCeEEEeeeCceeeeccCCCcCCCCcccccccc
Q psy6828 215 EAESFDSVTIYFSDIVGFTAMSAESTPLQVVDFLNDLYTCFDSIVGNYDVYKVETIGDAYMVVSGLPIRNGEQHAVGNYD 294 (392)
Q Consensus 215 ~~~~~~~vtvlf~DI~~ft~l~~~~~p~~l~~~Ln~~~~~~~~~v~~~~g~~~~~~Gd~~~a~~g~~~~~~~~~~~~~~~ 294 (392)
+.+.+++++++|.||++||.+++..+|+++.++||+++..+++++.+|+|.+++++||++|++||.|.
T Consensus 2 ~~~~~~~vtvlf~di~~ft~l~~~~~~~~~~~~l~~~~~~~~~~v~~~~g~~~~~~Gd~~~~~f~~~~------------ 69 (184)
T PF00211_consen 2 YSEQYRNVTVLFADIVGFTDLTEQLDPEELVRLLNDFFSSLDRIVKQHGGEIIKFIGDGVMAVFGLPE------------ 69 (184)
T ss_dssp EEEEEEEEEEEEEEETTHHHHHHHSHHHHHHHHHHHHHHHHHHHHHHTTEEEEEEETTEEEEEESSSS------------
T ss_pred CccccCeEEEEEEEecCcHHHHHhCCchhHHHHHHHHHHHhhhccccccccccccccceeEEEecccc------------
Confidence 35667899999999999999999999999999999999999999999999999999999988888762
Q ss_pred ccceeeccceeEEEeCCCCCCChhhHHHHHHHHHHHHHHHHHhcccCCCCCCceEEEEeeccceeEeeeccCCceeeeec
Q psy6828 295 VYKVETIGDAYMVVSGLPIRNGEQHAGEIASMSLDLLEAVKRFTVRHRPHDDLKLRIGIHSGPVCAGVVGLKMPRYCLFG 374 (392)
Q Consensus 295 ~~~~~~~~d~~~~~~g~~~~~~~~~a~~a~~~a~~~~~~~~~~~~~~~~~~~~~~~iGi~~G~v~~g~iG~~~~~y~~~G 374 (392)
...+++.+|+++|+++.+.+++++... ..++++|||||+|+|++|++|..+++|++||
T Consensus 70 --------------------~~~~~~~~a~~~al~~~~~~~~~~~~~--~~~~~~rIGI~~G~v~~g~~G~~~~~~~v~G 127 (184)
T PF00211_consen 70 --------------------PDEDAAERAVQFALALLEALERLNKES--GPPLSVRIGIHTGPVVVGVVGSRRPEYDVFG 127 (184)
T ss_dssp --------------------CHCHHHHHHHHHHHHHHHHHHHHHHHH--HSS-EEEEEEEEEEEEEEEEESSSEEEEEES
T ss_pred --------------------ccccccccccccccchhhccccccccc--ceeeeeeccccccccccccccCcccceeeee
Confidence 224689999999999999998876543 4689999999999999999996666999999
Q ss_pred chHHHHHhhhhcCCCCC
Q psy6828 375 DTVNTASRMESTGEDVV 391 (392)
Q Consensus 375 ~~Vn~AsRle~~~~~g~ 391 (392)
++||+|+||+++|.||.
T Consensus 128 ~~vn~Aarl~~~a~~~~ 144 (184)
T PF00211_consen 128 DAVNIAARLESLAPPGQ 144 (184)
T ss_dssp HHHHHHHHHHHTSSTTS
T ss_pred hhhhhhHHHHHhhcccc
Confidence 99999999999999974
No 5
>COG2114 CyaA Adenylate cyclase, family 3 (some proteins contain HAMP domain) [Signal transduction mechanisms]
Probab=99.95 E-value=3.7e-27 Score=211.88 Aligned_cols=130 Identities=33% Similarity=0.479 Sum_probs=109.5
Q ss_pred CceEEEeecccchhhhhccCChhhHHHhHHHHHHHHHHhhhhcCeEEEeeeCceeeeccCCCcCCCCcccccccccccee
Q psy6828 220 DSVTIYFSDIVGFTAMSAESTPLQVVDFLNDLYTCFDSIVGNYDVYKVETIGDAYMVVSGLPIRNGEQHAVGNYDVYKVE 299 (392)
Q Consensus 220 ~~vtvlf~DI~~ft~l~~~~~p~~l~~~Ln~~~~~~~~~v~~~~g~~~~~~Gd~~~a~~g~~~~~~~~~~~~~~~~~~~~ 299 (392)
+.++++|+|+++||.+++..+|+.+.+++|.||+.+...+.+|+|.++|++||++||.||.|..
T Consensus 45 ~~vtilfaDi~g~T~l~~~~~~~~~~~ll~~~~~~~~~~v~~~gG~v~k~iGD~~la~F~~p~~---------------- 108 (227)
T COG2114 45 RRVTLLFADIVGSTELSESLGDEALVELLNLYFDAVAEVVARHGGRVVKFIGDGFLAVFGRPSP---------------- 108 (227)
T ss_pred ceEEEEEEeeccchHHhhhCCHHHHHHHHHHHHHHHHHHHHHcCCEEEEEecceEEEEeCCCCC----------------
Confidence 7899999999999999999999999999999999999999999999999999999888888732
Q ss_pred eccceeEEEeCCCCCCChhhHHHHHH-HHHHHHHHHHHhcccCCCCCCceEEEEeeccceeEeeeccCCceeeeecchHH
Q psy6828 300 TIGDAYMVVSGLPIRNGEQHAGEIAS-MSLDLLEAVKRFTVRHRPHDDLKLRIGIHSGPVCAGVVGLKMPRYCLFGDTVN 378 (392)
Q Consensus 300 ~~~d~~~~~~g~~~~~~~~~a~~a~~-~a~~~~~~~~~~~~~~~~~~~~~~~iGi~~G~v~~g~iG~~~~~y~~~G~~Vn 378 (392)
.. +|.+|+. +++++.+...+++ ... +++|||||+|+|++|++|+ ||++|++||
T Consensus 109 ---------------~~--~A~~~a~~~~~~~~~~~~~~~----~~~-l~~riGi~~G~vv~~~~g~----~~~~G~~VN 162 (227)
T COG2114 109 ---------------LE--DAVACALDLQLALRNPLARLR----RES-LRVRIGIHTGEVVVGNTGG----YTVVGSAVN 162 (227)
T ss_pred ---------------cH--HHHHHHHHHHHHHHHHHhhcc----CcC-eeEEEEEEeecEEEEeecC----eeEechHhH
Confidence 11 3333333 3445555444432 112 9999999999999999998 999999999
Q ss_pred HHHhhhhcCCCCC
Q psy6828 379 TASRMESTGEDVV 391 (392)
Q Consensus 379 ~AsRle~~~~~g~ 391 (392)
+|||||++++||.
T Consensus 163 ~AaRLe~~a~~g~ 175 (227)
T COG2114 163 QAARLESLAKPGQ 175 (227)
T ss_pred HHHHHHHhcCCCe
Confidence 9999999999873
No 6
>KOG0593|consensus
Probab=99.94 E-value=2e-27 Score=211.03 Aligned_cols=158 Identities=16% Similarity=0.188 Sum_probs=121.2
Q ss_pred eeccCCCCCcceeEEEEEEEeecCcEEEEEEcCCCCh--hHHHHHHHHHHH-----------------------------
Q psy6828 46 SLSSNPDSDFRYSAIFTPIGIYKGRIFAIKRIPKKSV--DITRAMKKELKI----------------------------- 94 (392)
Q Consensus 46 ~~~~~~lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~~--~~~~~~~~E~~~----------------------------- 94 (392)
|.....+|+|+||+||+|+++.||+.||||++....- ...+-..+|+..
T Consensus 4 YE~LgkvGEGSYGvV~KCrnk~TgqIVAIKkF~Esedd~~VkKIAlREIrmLKqLkH~NLVnLiEVFrrkrklhLVFE~~ 83 (396)
T KOG0593|consen 4 YEKLGKVGEGSYGVVMKCRNKDTGQIVAIKKFVESEDDPVVKKIALREIRMLKQLKHENLVNLIEVFRRKRKLHLVFEYC 83 (396)
T ss_pred HhhhhccccCcceEEEEeccCCcccEEEEEeeccCCccHHHHHHHHHHHHHHHhcccchHHHHHHHHHhcceeEEEeeec
Confidence 3345679999999999999999999999999965432 334445666665
Q ss_pred -----HHhhcCCcCCCHHHHHHHHHHHHHHHHHHhcCCcccccCCCCCceEEcCCceEEEeccccchhcccc-ccc----
Q psy6828 95 -----DIMENEDVKLDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLVDSRWVVKLADFGLTEFKRDA-EYT---- 164 (392)
Q Consensus 95 -----~~l~~~~~~l~~~~~~~i~~qi~~~l~ylH~~~iiiHrDlKp~NIll~~~~~~kl~DFGla~~~~~~-~~~---- 164 (392)
+-++.....++++.+..+++|++.|+.|+|++++ |||||||+|||++.+|.+||||||+|+.+... ...
T Consensus 84 dhTvL~eLe~~p~G~~~~~vk~~l~Q~l~ai~~cHk~n~-IHRDIKPENILit~~gvvKLCDFGFAR~L~~pgd~YTDYV 162 (396)
T KOG0593|consen 84 DHTVLHELERYPNGVPSELVKKYLYQLLKAIHFCHKNNC-IHRDIKPENILITQNGVVKLCDFGFARTLSAPGDNYTDYV 162 (396)
T ss_pred chHHHHHHHhccCCCCHHHHHHHHHHHHHHhhhhhhcCe-ecccCChhheEEecCCcEEeccchhhHhhcCCcchhhhhh
Confidence 3333333368999999999999999999999999 99999999999999999999999999987632 211
Q ss_pred -------------------cccccceeeeeee--ccCCCCcccccccc---cchhhhccCCHHH
Q psy6828 165 -------------------GTDQHSFLQHTYH--VNRAGSTESLHCKC---DEALLFEMLPRSV 204 (392)
Q Consensus 165 -------------------~~d~~s~g~~~~~--~~~~~~~~~~d~~~---~~~lL~~~lp~~v 204 (392)
..|+|++||++-| ..+..+.++.|..+ ....|..++|++.
T Consensus 163 ATRWYRaPELLvGDtqYG~pVDiWAiGCv~aEl~~G~pL~PG~SDiDQLy~I~ktLG~L~prhq 226 (396)
T KOG0593|consen 163 ATRWYRAPELLVGDTQYGKPVDIWAIGCVFAELLTGEPLWPGRSDIDQLYLIRKTLGNLIPRHQ 226 (396)
T ss_pred hhhhccChhhhcccCcCCCcccchhhhHHHHHHhcCCcCCCCcchHHHHHHHHHHHcccCHHHH
Confidence 2299999999988 44555555556543 3445566666553
No 7
>KOG0598|consensus
Probab=99.94 E-value=2.1e-27 Score=216.72 Aligned_cols=152 Identities=23% Similarity=0.286 Sum_probs=125.9
Q ss_pred eeccCCCCCcceeEEEEEEEeecCcEEEEEEcCCCCh---hHHHHHHHHHHH--------------------------HH
Q psy6828 46 SLSSNPDSDFRYSAIFTPIGIYKGRIFAIKRIPKKSV---DITRAMKKELKI--------------------------DI 96 (392)
Q Consensus 46 ~~~~~~lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~~---~~~~~~~~E~~~--------------------------~~ 96 (392)
+...+.+|+|+||+||+++.+.+++.||+|+++|... ...+...+|..+ +|
T Consensus 27 F~~lkviGkG~fGkV~~Vrk~dt~kiYAmKvl~K~~iv~~~e~~~~~~Er~IL~~v~hPFiv~l~ysFQt~~kLylVld~ 106 (357)
T KOG0598|consen 27 FEILKVIGKGSFGKVFQVRKKDTGKIYAMKVLKKKKIVEKKEVRHTKAERNILSKIKHPFIVKLIYSFQTEEKLYLVLDY 106 (357)
T ss_pred eeeeeeeeccCCceEEEEEEcccCceeehhhhhhhHhhhhhhHHHHHHHHHHHHhCCCCcEeeeEEecccCCeEEEEEec
Confidence 4456789999999999999999999999999998765 345677888887 33
Q ss_pred hhc--------CCcCCCHHHHHHHHHHHHHHHHHHhcCCcccccCCCCCceEEcCCceEEEeccccchhccccccccccc
Q psy6828 97 MEN--------EDVKLDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLVDSRWVVKLADFGLTEFKRDAEYTGTDQ 168 (392)
Q Consensus 97 l~~--------~~~~l~~~~~~~i~~qi~~~l~ylH~~~iiiHrDlKp~NIll~~~~~~kl~DFGla~~~~~~~~~~~d~ 168 (392)
+.+ .++.|++..++.|+.+|+.||.|||+++| |||||||+||||+.+|+++|+|||+|+........ +-
T Consensus 107 ~~GGeLf~hL~~eg~F~E~~arfYlaEi~lAL~~LH~~gI-iyRDlKPENILLd~~GHi~LtDFgL~k~~~~~~~~--t~ 183 (357)
T KOG0598|consen 107 LNGGELFYHLQREGRFSEDRARFYLAEIVLALGYLHSKGI-IYRDLKPENILLDEQGHIKLTDFGLCKEDLKDGDA--TR 183 (357)
T ss_pred cCCccHHHHHHhcCCcchhHHHHHHHHHHHHHHHHHhCCe-eeccCCHHHeeecCCCcEEEeccccchhcccCCCc--cc
Confidence 333 33479999999999999999999999999 99999999999999999999999999965433211 11
Q ss_pred cceeeeeeeccC----CCCcccccccccchhhhccC
Q psy6828 169 HSFLQHTYHVNR----AGSTESLHCKCDEALLFEML 200 (392)
Q Consensus 169 ~s~g~~~~~~~~----~~~~~~~d~~~~~~lL~~~l 200 (392)
.-.|++.|++|| .++...+|+|+.+.+++.|+
T Consensus 184 tfcGT~eYmAPEil~~~gy~~~vDWWsLGillYeML 219 (357)
T KOG0598|consen 184 TFCGTPEYMAPEILLGKGYDKAVDWWSLGILLYEML 219 (357)
T ss_pred cccCCccccChHHHhcCCCCcccchHhHHHHHHHHh
Confidence 246888888776 67778888999998888887
No 8
>KOG0615|consensus
Probab=99.94 E-value=1.5e-27 Score=219.64 Aligned_cols=135 Identities=22% Similarity=0.324 Sum_probs=111.8
Q ss_pred cceeeeccCCCCCcceeEEEEEEEeecCcEEEEEEcCCCChh-------HHHHHHHHHHH--------------------
Q psy6828 42 TSQVSLSSNPDSDFRYSAIFTPIGIYKGRIFAIKRIPKKSVD-------ITRAMKKELKI-------------------- 94 (392)
Q Consensus 42 ~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~~~-------~~~~~~~E~~~-------------------- 94 (392)
..+.|+..+.||+|+||.|.+|+++.+|+.||||+++++... ....+.+|+++
T Consensus 170 ~~d~yii~~~LGsGafg~Vkla~e~~tgk~vAiKIi~krk~~~~s~~~~~~~~v~~EieILkkL~HP~IV~~~d~f~~~d 249 (475)
T KOG0615|consen 170 FNDYYIISKTLGSGAFGLVKLAYEKKTGKQVAIKIINKRKSTGCSRAIAKTRDVQNEIEILKKLSHPNIVRIKDFFEVPD 249 (475)
T ss_pred hcceeEeeeeecCCceeEEEEEEEcccCcEEEeeeeehhhcccccccccchhhhHHHHHHHHhcCCCCEEEEeeeeecCC
Confidence 457788999999999999999999999999999999876542 22345688888
Q ss_pred ------HHhhcC--------CcCCCHHHHHHHHHHHHHHHHHHhcCCcccccCCCCCceEEcCC---ceEEEeccccchh
Q psy6828 95 ------DIMENE--------DVKLDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLVDSR---WVVKLADFGLTEF 157 (392)
Q Consensus 95 ------~~l~~~--------~~~l~~~~~~~i~~qi~~~l~ylH~~~iiiHrDlKp~NIll~~~---~~~kl~DFGla~~ 157 (392)
+|++.+ ++.+.+..-+.+++|++.|+.|||+.|| +||||||+|||+..+ ..+||+|||+|++
T Consensus 250 s~YmVlE~v~GGeLfd~vv~nk~l~ed~~K~~f~Qll~avkYLH~~GI-~HRDiKPeNILl~~~~e~~llKItDFGlAK~ 328 (475)
T KOG0615|consen 250 SSYMVLEYVEGGELFDKVVANKYLREDLGKLLFKQLLTAVKYLHSQGI-IHRDIKPENILLSNDAEDCLLKITDFGLAKV 328 (475)
T ss_pred ceEEEEEEecCccHHHHHHhccccccchhHHHHHHHHHHHHHHHHcCc-ccccCCcceEEeccCCcceEEEecccchhhc
Confidence 223322 2268888889999999999999999999 999999999999766 7899999999998
Q ss_pred ccccccccc-------------------------cccceeeeeee
Q psy6828 158 KRDAEYTGT-------------------------DQHSFLQHTYH 177 (392)
Q Consensus 158 ~~~~~~~~~-------------------------d~~s~g~~~~~ 177 (392)
......+.+ |+||+|+++|-
T Consensus 329 ~g~~sfm~TlCGTpsYvAPEVl~~kg~~~~~~kVDiWSlGcvLfv 373 (475)
T KOG0615|consen 329 SGEGSFMKTLCGTPSYVAPEVLASKGVEYYPSKVDIWSLGCVLFV 373 (475)
T ss_pred cccceehhhhcCCccccChhheecCCeecccchheeeeccceEEE
Confidence 755443221 99999999998
No 9
>KOG0575|consensus
Probab=99.94 E-value=2.4e-27 Score=228.36 Aligned_cols=132 Identities=21% Similarity=0.312 Sum_probs=116.8
Q ss_pred eeeeccCCCCCcceeEEEEEEEeecCcEEEEEEcCCCCh---hHHHHHHHHHHH--------------------------
Q psy6828 44 QVSLSSNPDSDFRYSAIFTPIGIYKGRIFAIKRIPKKSV---DITRAMKKELKI-------------------------- 94 (392)
Q Consensus 44 ~~~~~~~~lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~~---~~~~~~~~E~~~-------------------------- 94 (392)
.+|...+-||+|||+.||.+++..+|+.||+|++.+..+ ...+.+.+|++|
T Consensus 18 ~~Y~~g~~LGkGgFA~cYe~~~~~tge~~A~KvVpk~~l~k~~~reKv~~EIeIHr~L~HpnIV~f~~~FEDs~nVYivL 97 (592)
T KOG0575|consen 18 KRYKRGRFLGKGGFARCYEARDLDTGEVVAVKVVPKKLLKKPKQREKVLNEIEIHRSLKHPNIVQFYHFFEDSNNVYIVL 97 (592)
T ss_pred ceeeeeeeeccCcceEEEEEEEcCCCcEEEEEEeehHHhcCcchHHHHHHHHHHHHhcCCCcEEeeeeEeecCCceEEEE
Confidence 778889999999999999999999999999999998644 578899999999
Q ss_pred ---------HHhhcCCcCCCHHHHHHHHHHHHHHHHHHhcCCcccccCCCCCceEEcCCceEEEeccccchhcccc-ccc
Q psy6828 95 ---------DIMENEDVKLDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLVDSRWVVKLADFGLTEFKRDA-EYT 164 (392)
Q Consensus 95 ---------~~l~~~~~~l~~~~~~~i~~qi~~~l~ylH~~~iiiHrDlKp~NIll~~~~~~kl~DFGla~~~~~~-~~~ 164 (392)
++++ ....++|.+++.+++||+.||.|||+++| +|||||..|++|+++.++||+|||||..+... +..
T Consensus 98 ELC~~~sL~el~K-rrk~ltEpEary~l~QIv~GlkYLH~~~I-iHRDLKLGNlfL~~~~~VKIgDFGLAt~le~~~Erk 175 (592)
T KOG0575|consen 98 ELCHRGSLMELLK-RRKPLTEPEARYFLRQIVEGLKYLHSLGI-IHRDLKLGNLFLNENMNVKIGDFGLATQLEYDGERK 175 (592)
T ss_pred EecCCccHHHHHH-hcCCCCcHHHHHHHHHHHHHHHHHHhcCc-eecccchhheeecCcCcEEecccceeeeecCccccc
Confidence 5555 33479999999999999999999999999 99999999999999999999999999987643 211
Q ss_pred c----------------------ccccceeeeeee
Q psy6828 165 G----------------------TDQHSFLQHTYH 177 (392)
Q Consensus 165 ~----------------------~d~~s~g~~~~~ 177 (392)
. .|+||+||++|-
T Consensus 176 ~TlCGTPNYIAPEVl~k~gHsfEvDiWSlGcvmYt 210 (592)
T KOG0575|consen 176 KTLCGTPNYIAPEVLNKSGHSFEVDIWSLGCVMYT 210 (592)
T ss_pred ceecCCCcccChhHhccCCCCCchhhhhhhhHHHh
Confidence 1 199999999998
No 10
>KOG0659|consensus
Probab=99.94 E-value=1e-26 Score=203.06 Aligned_cols=116 Identities=26% Similarity=0.395 Sum_probs=97.0
Q ss_pred eeeccCCCCCcceeEEEEEEEeecCcEEEEEEcCCCChh--HHHHHHHHHHH----------------------------
Q psy6828 45 VSLSSNPDSDFRYSAIFTPIGIYKGRIFAIKRIPKKSVD--ITRAMKKELKI---------------------------- 94 (392)
Q Consensus 45 ~~~~~~~lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~~~--~~~~~~~E~~~---------------------------- 94 (392)
+|...+.+|+|.||+||+|++..+|+.||||++...... ......+|+..
T Consensus 3 rY~~~~~lGEG~~gvVyka~d~~t~~~VAIKKIkl~~~kdGi~~talREIK~Lqel~h~nIi~LiD~F~~~~~l~lVfEf 82 (318)
T KOG0659|consen 3 RYEKLEKLGEGTYGVVYKARDTETGKRVAIKKIKLGNAKDGINRTALREIKLLQELKHPNIIELIDVFPHKSNLSLVFEF 82 (318)
T ss_pred hhhhhhhhcCcceEEEEEEEecCCCcEEEEEEeeccccccCccHHHHHHHHHHHHccCcchhhhhhhccCCCceEEEEEe
Confidence 456677899999999999999999999999999765432 12234444444
Q ss_pred ------HHhhcCCcCCCHHHHHHHHHHHHHHHHHHhcCCcccccCCCCCceEEcCCceEEEeccccchhcccc
Q psy6828 95 ------DIMENEDVKLDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLVDSRWVVKLADFGLTEFKRDA 161 (392)
Q Consensus 95 ------~~l~~~~~~l~~~~~~~i~~qi~~~l~ylH~~~iiiHrDlKp~NIll~~~~~~kl~DFGla~~~~~~ 161 (392)
..++..+..++..++..|+.++++|+.|||++.| +||||||.|+|++++|.+||+|||+++...+.
T Consensus 83 m~tdLe~vIkd~~i~l~pa~iK~y~~m~LkGl~y~H~~~I-lHRDlKPnNLLis~~g~lKiADFGLAr~f~~p 154 (318)
T KOG0659|consen 83 MPTDLEVVIKDKNIILSPADIKSYMLMTLKGLAYCHSKWI-LHRDLKPNNLLISSDGQLKIADFGLARFFGSP 154 (318)
T ss_pred ccccHHHHhcccccccCHHHHHHHHHHHHHHHHHHHhhhh-hcccCCccceEEcCCCcEEeecccchhccCCC
Confidence 3444566679999999999999999999999999 99999999999999999999999999987643
No 11
>KOG0595|consensus
Probab=99.94 E-value=1.6e-26 Score=212.93 Aligned_cols=151 Identities=20% Similarity=0.287 Sum_probs=121.4
Q ss_pred eeeccCCCCCcceeEEEEEEEeecCcEEEEEEcCCCCh--hHHHHHHHHHHH----------------------------
Q psy6828 45 VSLSSNPDSDFRYSAIFTPIGIYKGRIFAIKRIPKKSV--DITRAMKKELKI---------------------------- 94 (392)
Q Consensus 45 ~~~~~~~lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~~--~~~~~~~~E~~~---------------------------- 94 (392)
-|...+.||.|+|++||+|+++.++..||||.+.+..+ ...+.+..|+.+
T Consensus 11 ~y~~~~~iG~GsfavVykg~h~~~~~~VAIK~i~~~~l~~k~~e~L~~Ei~iLkel~H~nIV~l~d~~~~~~~i~lVMEy 90 (429)
T KOG0595|consen 11 DYELSREIGSGSFAVVYKGRHKKSGTEVAIKCIAKKKLNKKLVELLLSEIKILKELKHPNIVRLLDCIEDDDFIYLVMEY 90 (429)
T ss_pred cceehhhccCcceEEEEEeEeccCCceEEeeeehhhccCHHHHHHHHHHHHHHHhcCCcceeeEEEEEecCCeEEEEEEe
Confidence 35566779999999999999999999999999988743 556667778877
Q ss_pred -------HHhhcCCcCCCHHHHHHHHHHHHHHHHHHhcCCcccccCCCCCceEEcCC------ceEEEeccccchhcccc
Q psy6828 95 -------DIMENEDVKLDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLVDSR------WVVKLADFGLTEFKRDA 161 (392)
Q Consensus 95 -------~~l~~~~~~l~~~~~~~i~~qi~~~l~ylH~~~iiiHrDlKp~NIll~~~------~~~kl~DFGla~~~~~~ 161 (392)
+|+++.. .+++..++.++.||+.||++||+++| |||||||+||||+.. -.+||+|||+|+.+...
T Consensus 91 C~gGDLs~yi~~~~-~l~e~t~r~Fm~QLA~alq~L~~~~I-iHRDLKPQNiLLs~~~~~~~~~~LKIADFGfAR~L~~~ 168 (429)
T KOG0595|consen 91 CNGGDLSDYIRRRG-RLPEATARHFMQQLASALQFLHENNI-IHRDLKPQNILLSTTARNDTSPVLKIADFGFARFLQPG 168 (429)
T ss_pred CCCCCHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHHHCCe-eeccCCcceEEeccCCCCCCCceEEecccchhhhCCch
Confidence 5665554 79999999999999999999999999 999999999999765 45899999999998754
Q ss_pred ccccccccceeeeeeeccC----CCCcccccccccchhhhccC
Q psy6828 162 EYTGTDQHSFLQHTYHVNR----AGSTESLHCKCDEALLFEML 200 (392)
Q Consensus 162 ~~~~~d~~s~g~~~~~~~~----~~~~~~~d~~~~~~lL~~~l 200 (392)
.... ...|.++||+|| ..|..+.|.|+.+.++++++
T Consensus 169 ~~a~---tlcGSplYMAPEV~~~~~YdAKADLWSiG~Ilyq~l 208 (429)
T KOG0595|consen 169 SMAE---TLCGSPLYMAPEVIMSQQYDAKADLWSIGTILYQCL 208 (429)
T ss_pred hHHH---HhhCCccccCHHHHHhccccchhhHHHHHHHHHHHH
Confidence 4322 234667777665 44566667777777766665
No 12
>KOG3619|consensus
Probab=99.93 E-value=1.4e-26 Score=234.78 Aligned_cols=168 Identities=33% Similarity=0.603 Sum_probs=148.8
Q ss_pred cccchhhhccCCHHHHHHhhcC--------------CCccccccCceEEEeecccchhhhhccCChhhHHHhHHHHHHHH
Q psy6828 190 KCDEALLFEMLPRSVAEQLRRG--------------TSVEAESFDSVTIYFSDIVGFTAMSAESTPLQVVDFLNDLYTCF 255 (392)
Q Consensus 190 ~~~~~lL~~~lp~~v~~~l~~~--------------~~~~~~~~~~vtvlf~DI~~ft~l~~~~~p~~l~~~Ln~~~~~~ 255 (392)
++.++++.+.+|.+++..++.. .....+.+++++++|+||+|||.++..+++++++.+||++|.+|
T Consensus 67 ~~qerlllsvlp~~va~~m~~~i~~~~~~~~~~~~f~~iy~~~h~nVSIl~adivgft~l~s~~saqelv~~LneLf~rf 146 (867)
T KOG3619|consen 67 QQQERLLLSVLPAHVAMEMKKDIIESSARCKNDNQFHKLYIQRHDNVSILFADIVGFTQLASQCSAQELVKVLNELFARF 146 (867)
T ss_pred HHHHHHHHHhhhHHHHHHHHHHHHhhhhcchhhhccchhheeeccchHhhHHHHhhhhhhhcCCCHHHHHHHHHHHHHHH
Confidence 5567889999999998877542 12345677899999999999999999999999999999999999
Q ss_pred HHhhhhcCeEEEeeeCceeeeccCCCcCCCCccccccccccceeeccceeEEEeCCCCCCChhhHHHHHHHHHHHHHHHH
Q psy6828 256 DSIVGNYDVYKVETIGDAYMVVSGLPIRNGEQHAVGNYDVYKVETIGDAYMVVSGLPIRNGEQHAGEIASMSLDLLEAVK 335 (392)
Q Consensus 256 ~~~v~~~~g~~~~~~Gd~~~a~~g~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~g~~~~~~~~~a~~a~~~a~~~~~~~~ 335 (392)
|+++.+++|..+|+.|||| .+++|+|.++ ++||..|+.+.++|.++++
T Consensus 147 d~lA~~~~clRiKiLGdcy-------------------------------yCvsglp~~~-~dHA~~~v~mgl~Mi~aI~ 194 (867)
T KOG3619|consen 147 DRLAAENHCLRIKILGDCY-------------------------------YCVSGLPEAR-PDHAVCCVEMGLDMIKAIK 194 (867)
T ss_pred HHHHHhcceEeeeeeccee-------------------------------EEecCCCCCC-hhHHHHHHHHHHHHHHHHH
Confidence 9999999999999998888 5666666444 4799999999999999999
Q ss_pred HhcccCCCCCCceEEEEeeccceeEeeeccCCceeeeecchHHHHHhhhhcCCCCC
Q psy6828 336 RFTVRHRPHDDLKLRIGIHSGPVCAGVVGLKMPRYCLFGDTVNTASRMESTGEDVV 391 (392)
Q Consensus 336 ~~~~~~~~~~~~~~~iGi~~G~v~~g~iG~~~~~y~~~G~~Vn~AsRle~~~~~g~ 391 (392)
.++.. .+.++++|||||+|+|.+|++|.+|++||||++.|.+|.+||+.|.||.
T Consensus 195 ~vr~a--t~~dvnmrvGihsG~Vl~GvlG~~kwq~DVws~dv~lAn~mEs~G~pgr 248 (867)
T KOG3619|consen 195 QVREA--TGVDVNMRVGIHSGSVLCGVLGLRKWQYDVWSNDVTLANHMEAGGVPGR 248 (867)
T ss_pred HHHHH--hCCCCceEEEEecCceeecccccceeeeeeccchhhhhhhhhhcCCCce
Confidence 97643 4678999999999999999999999999999999999999999999996
No 13
>KOG0600|consensus
Probab=99.93 E-value=1.4e-26 Score=218.17 Aligned_cols=116 Identities=26% Similarity=0.438 Sum_probs=100.2
Q ss_pred eeccCCCCCcceeEEEEEEEeecCcEEEEEEcCCCC--hhHHHHHHHHHHH----------------------------H
Q psy6828 46 SLSSNPDSDFRYSAIFTPIGIYKGRIFAIKRIPKKS--VDITRAMKKELKI----------------------------D 95 (392)
Q Consensus 46 ~~~~~~lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~--~~~~~~~~~E~~~----------------------------~ 95 (392)
|...++||+|+||.||+|++..+|+.||+|+++... .....-+.+|+.| +
T Consensus 119 feki~kIGeGTyg~VYkAr~~~tgkivALKKvr~d~~~~~~~~t~~REI~ILr~l~HpNIikL~eivt~~~~~siYlVFe 198 (560)
T KOG0600|consen 119 FEKIEKIGEGTYGQVYKARDLETGKIVALKKVRFDNEKEGFPITAIREIKILRRLDHPNIIKLEEIVTSKLSGSIYLVFE 198 (560)
T ss_pred HHHHHHhcCcchhheeEeeecccCcEEEEEEeecccCCCcchHHHHHHHHHHHhcCCCcccceeeEEEecCCceEEEEEe
Confidence 455788999999999999999999999999997654 2445567788888 3
Q ss_pred Hh--------hcCCcCCCHHHHHHHHHHHHHHHHHHhcCCcccccCCCCCceEEcCCceEEEeccccchhccccc
Q psy6828 96 IM--------ENEDVKLDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLVDSRWVVKLADFGLTEFKRDAE 162 (392)
Q Consensus 96 ~l--------~~~~~~l~~~~~~~i~~qi~~~l~ylH~~~iiiHrDlKp~NIll~~~~~~kl~DFGla~~~~~~~ 162 (392)
|| .+...+|++.++..|++|+++||.|||++++ +|||||.+|||||++|.+||+|||||+++....
T Consensus 199 YMdhDL~GLl~~p~vkft~~qIKc~mkQLl~Gl~~cH~~gv-lHRDIK~SNiLidn~G~LKiaDFGLAr~y~~~~ 272 (560)
T KOG0600|consen 199 YMDHDLSGLLSSPGVKFTEPQIKCYMKQLLEGLEYCHSRGV-LHRDIKGSNILIDNNGVLKIADFGLARFYTPSG 272 (560)
T ss_pred cccchhhhhhcCCCcccChHHHHHHHHHHHHHHHHHhhcCe-eeccccccceEEcCCCCEEeccccceeeccCCC
Confidence 33 3445589999999999999999999999999 999999999999999999999999999876544
No 14
>KOG0592|consensus
Probab=99.93 E-value=7.8e-27 Score=221.61 Aligned_cols=113 Identities=23% Similarity=0.339 Sum_probs=95.6
Q ss_pred eeccCCCCCcceeEEEEEEEeecCcEEEEEEcCCCCh---hHHHHHHHHHHH----------------------------
Q psy6828 46 SLSSNPDSDFRYSAIFTPIGIYKGRIFAIKRIPKKSV---DITRAMKKELKI---------------------------- 94 (392)
Q Consensus 46 ~~~~~~lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~~---~~~~~~~~E~~~---------------------------- 94 (392)
|.-++.+|+|+|++|++|+++.+++.||||++.++.+ .-.+++..|-..
T Consensus 75 F~Fg~~lGeGSYStV~~A~~~~t~keYAiKVl~K~~Iike~KvkYV~~Ek~~l~~L~~hPgivkLy~TFQD~~sLYFvLe 154 (604)
T KOG0592|consen 75 FKFGKILGEGSYSTVVLAREKATGKEYAIKVLDKRYIIKEKKVKYVTREKEALTQLSGHPGIVKLYFTFQDEESLYFVLE 154 (604)
T ss_pred cchhheeccccceeEEEeeecCCCceeeHhhhhHHHHHhhcccchhhHHHHHHHHhhCCCCeEEEEEEeecccceEEEEE
Confidence 5568889999999999999999999999999987754 223344445444
Q ss_pred --------HHhhcCCcCCCHHHHHHHHHHHHHHHHHHhcCCcccccCCCCCceEEcCCceEEEeccccchhccc
Q psy6828 95 --------DIMENEDVKLDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLVDSRWVVKLADFGLTEFKRD 160 (392)
Q Consensus 95 --------~~l~~~~~~l~~~~~~~i~~qi~~~l~ylH~~~iiiHrDlKp~NIll~~~~~~kl~DFGla~~~~~ 160 (392)
++++.. +.|++..++.++.||+.||+|||++|| |||||||+||||+.++++||+|||.|+.+..
T Consensus 155 ~A~nGdll~~i~K~-Gsfde~caR~YAAeIldAleylH~~GI-IHRDlKPENILLd~dmhikITDFGsAK~l~~ 226 (604)
T KOG0592|consen 155 YAPNGDLLDLIKKY-GSFDETCARFYAAEILDALEYLHSNGI-IHRDLKPENILLDKDGHIKITDFGSAKILSP 226 (604)
T ss_pred ecCCCcHHHHHHHh-CcchHHHHHHHHHHHHHHHHHHHhcCc-eeccCChhheeEcCCCcEEEeeccccccCCh
Confidence 344333 379999999999999999999999999 9999999999999999999999999997643
No 15
>KOG3618|consensus
Probab=99.93 E-value=5.4e-26 Score=220.89 Aligned_cols=166 Identities=32% Similarity=0.587 Sum_probs=143.4
Q ss_pred cchhhhccCCHHHHHHhhcCCCcc---------------------------------ccccCceEEEeecccchhhhhcc
Q psy6828 192 DEALLFEMLPRSVAEQLRRGTSVE---------------------------------AESFDSVTIYFSDIVGFTAMSAE 238 (392)
Q Consensus 192 ~~~lL~~~lp~~v~~~l~~~~~~~---------------------------------~~~~~~vtvlf~DI~~ft~l~~~ 238 (392)
.+.++...+|+.+++.+.+....+ .+..++++++|+||+|||++++.
T Consensus 278 Ke~MIhSVMP~kvAD~Llk~g~~pS~nd~~~~~~~s~~~r~~~s~~vk~~~~FRPF~M~~menVSILFADIvGFTkMSsn 357 (1318)
T KOG3618|consen 278 KERMIHSVMPRKVADDLLKQGDEPSENDVKRHATSSPKNRKKKSSIVKAPIAFRPFKMQQMENVSILFADIVGFTKMSSN 357 (1318)
T ss_pred HHHHHHhhcChHHHHHHHhhcCCCCcccccCCCCCCcccccchhhccccccccCchhhhhhhhhhhhhhhhhchhhcccc
Confidence 356788889999998885422100 11234789999999999999999
Q ss_pred CChhhHHHhHHHHHHHHHHhhhhcCeEEEeeeCceeeeccCCCcCCCCccccccccccceeeccceeEEEeCCCCCCChh
Q psy6828 239 STPLQVVDFLNDLYTCFDSIVGNYDVYKVETIGDAYMVVSGLPIRNGEQHAVGNYDVYKVETIGDAYMVVSGLPIRNGEQ 318 (392)
Q Consensus 239 ~~p~~l~~~Ln~~~~~~~~~v~~~~g~~~~~~Gd~~~a~~g~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~g~~~~~~~~ 318 (392)
.++++++.+||++|.+||+.++.-|++++.+.|||| .++.|.|++.. |
T Consensus 358 KsA~~LV~lLNDLFgRFD~LC~l~gcEKISTLGDCY-------------------------------YCVaGCPEPra-D 405 (1318)
T KOG3618|consen 358 KSAHALVGLLNDLFGRFDRLCELTGCEKISTLGDCY-------------------------------YCVAGCPEPRA-D 405 (1318)
T ss_pred ccHHHHHHHHHHHHHHHHHHHHhcCcchhcccccee-------------------------------eeecCCCCCcc-c
Confidence 999999999999999999999999999999888888 66667776665 6
Q ss_pred hHHHHHHHHHHHHHHHHHhcccCCCCCCceEEEEeeccceeEeeeccCCceeeeecchHHHHHhhhhcCCCCC
Q psy6828 319 HAGEIASMSLDLLEAVKRFTVRHRPHDDLKLRIGIHSGPVCAGVVGLKMPRYCLFGDTVNTASRMESTGEDVV 391 (392)
Q Consensus 319 ~a~~a~~~a~~~~~~~~~~~~~~~~~~~~~~~iGi~~G~v~~g~iG~~~~~y~~~G~~Vn~AsRle~~~~~g~ 391 (392)
||.+|+++++.|+.+++++..++ .+.+++|+|+|||.|++|.+|.++.+||+|.+.||+|..|||.+++|.
T Consensus 406 HA~ccvEMGLgMI~AirqFd~~r--~e~VnMRVGvHTGtVlCGivGtrRfKFDVwSNDV~LAN~MEssGvag~ 476 (1318)
T KOG3618|consen 406 HAYCCVEMGLGMIKAIRQFDQER--KEMVNMRVGVHTGTVLCGIVGTRRFKFDVWSNDVNLANLMESSGVAGK 476 (1318)
T ss_pred ceeeehhhcchHHHHHHHHHHHh--hcccceEEEEecceEEeeeeecceEeeeeccCcchHHHHHHhcCCCcc
Confidence 99999999999999999986544 467999999999999999999988899999999999999999999985
No 16
>KOG0581|consensus
Probab=99.92 E-value=2.4e-25 Score=203.44 Aligned_cols=136 Identities=22% Similarity=0.346 Sum_probs=112.2
Q ss_pred cCCCCCcceeEEEEEEEeecCcEEEEEEcCCCC-hhHHHHHHHHHHH---------------------------HHhhcC
Q psy6828 49 SNPDSDFRYSAIFTPIGIYKGRIFAIKRIPKKS-VDITRAMKKELKI---------------------------DIMENE 100 (392)
Q Consensus 49 ~~~lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~-~~~~~~~~~E~~~---------------------------~~l~~~ 100 (392)
.+.||+|..|+||++.|+.+++.+|+|.+.... ....+++.+|+++ +||..+
T Consensus 84 ~~~lG~G~gG~V~kv~Hk~t~~i~AlK~I~~~~~~~~~~Qi~rEl~il~~~~spyIV~~ygaF~~~~~~isI~mEYMDgG 163 (364)
T KOG0581|consen 84 LGVLGSGNGGTVYKVRHKPTGKIYALKVILLNIDPALQKQILRELEILRSCQSPYIVGFYGAFYSNGEEISICMEYMDGG 163 (364)
T ss_pred hhhcccCCCcEEEEEEEcCCCeEEEEEeecccCCHHHHHHHHHHHHHHhhCCCCCeeeEeEEEEeCCceEEeehhhcCCC
Confidence 678999999999999999999999999995432 3566788999998 555544
Q ss_pred Cc--------CCCHHHHHHHHHHHHHHHHHHhc-CCcccccCCCCCceEEcCCceEEEeccccchhcccccc--------
Q psy6828 101 DV--------KLDNMFIASLVADILRGMLYLHD-SALRYHGNLKASNCLVDSRWVVKLADFGLTEFKRDAEY-------- 163 (392)
Q Consensus 101 ~~--------~l~~~~~~~i~~qi~~~l~ylH~-~~iiiHrDlKp~NIll~~~~~~kl~DFGla~~~~~~~~-------- 163 (392)
++ .++|.....++.++++||.|||+ .+| |||||||+|||++..|.+||||||.|+.+.....
T Consensus 164 SLd~~~k~~g~i~E~~L~~ia~~VL~GL~YLh~~~~I-IHRDIKPsNlLvNskGeVKicDFGVS~~lvnS~a~tfvGT~~ 242 (364)
T KOG0581|consen 164 SLDDILKRVGRIPEPVLGKIARAVLRGLSYLHEERKI-IHRDIKPSNLLVNSKGEVKICDFGVSGILVNSIANTFVGTSA 242 (364)
T ss_pred CHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHhhccCe-eeccCCHHHeeeccCCCEEeccccccHHhhhhhccccccccc
Confidence 33 59999999999999999999995 888 9999999999999999999999999987544321
Q ss_pred -------------ccccccceeeeeee--ccCCCCcc
Q psy6828 164 -------------TGTDQHSFLQHTYH--VNRAGSTE 185 (392)
Q Consensus 164 -------------~~~d~~s~g~~~~~--~~~~~~~~ 185 (392)
...|+||||..++| ..+|++..
T Consensus 243 YMsPERi~g~~Ys~~sDIWSLGLsllE~a~GrfP~~~ 279 (364)
T KOG0581|consen 243 YMSPERISGESYSVKSDIWSLGLSLLELAIGRFPYPP 279 (364)
T ss_pred ccChhhhcCCcCCcccceecccHHHHHHhhCCCCCCC
Confidence 12388888888888 55566555
No 17
>KOG0661|consensus
Probab=99.92 E-value=3.5e-26 Score=214.12 Aligned_cols=134 Identities=22% Similarity=0.291 Sum_probs=109.9
Q ss_pred ceeeeccCCCCCcceeEEEEEEEeecCcEEEEEEcCCCChhHHHH-HHHHHHH---------------------------
Q psy6828 43 SQVSLSSNPDSDFRYSAIFTPIGIYKGRIFAIKRIPKKSVDITRA-MKKELKI--------------------------- 94 (392)
Q Consensus 43 ~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~~~~~~~-~~~E~~~--------------------------- 94 (392)
..+|...++||+|+||.||+|..+.+|+.||||.++++.....+. =.+|+..
T Consensus 9 m~RY~~i~klGDGTfGsV~la~~~~~~~~VAIK~MK~Kf~s~ee~~nLREvksL~kln~hpniikL~Evi~d~~~~L~fV 88 (538)
T KOG0661|consen 9 MDRYTVIRKLGDGTFGSVYLAKSKETGELVAIKKMKKKFYSWEECMNLREVKSLRKLNPHPNIIKLKEVIRDNDRILYFV 88 (538)
T ss_pred HHHHHHHHHhcCCcceeEEEeeecCCCceeeHHHHHhhhccHHHHHHHHHHHHHHhcCCCCcchhhHHHhhccCceEeee
Confidence 456788899999999999999999999999999997654321110 1122222
Q ss_pred ---------HHhhcCCcCCCHHHHHHHHHHHHHHHHHHhcCCcccccCCCCCceEEcCCceEEEeccccchhccccccc-
Q psy6828 95 ---------DIMENEDVKLDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLVDSRWVVKLADFGLTEFKRDAEYT- 164 (392)
Q Consensus 95 ---------~~l~~~~~~l~~~~~~~i~~qi~~~l~ylH~~~iiiHrDlKp~NIll~~~~~~kl~DFGla~~~~~~~~~- 164 (392)
++++..+..|++..++.|++||++||.|+|.+|+ +|||+||+|||+..+..+||+|||+||.+.+..-.
T Consensus 89 fE~Md~NLYqLmK~R~r~fse~~irnim~QilqGL~hiHk~Gf-FHRDlKPENiLi~~~~~iKiaDFGLARev~SkpPYT 167 (538)
T KOG0661|consen 89 FEFMDCNLYQLMKDRNRLFSESDIRNIMYQILQGLAHIHKHGF-FHRDLKPENILISGNDVIKIADFGLAREVRSKPPYT 167 (538)
T ss_pred HHhhhhhHHHHHhhcCCcCCHHHHHHHHHHHHHHHHHHHhcCc-ccccCChhheEecccceeEecccccccccccCCCcc
Confidence 5666667789999999999999999999999999 99999999999998899999999999976543321
Q ss_pred ----------------------cccccceeeeeee
Q psy6828 165 ----------------------GTDQHSFLQHTYH 177 (392)
Q Consensus 165 ----------------------~~d~~s~g~~~~~ 177 (392)
..|+|++||+++|
T Consensus 168 eYVSTRWYRAPEvLLrs~~Ys~pvD~wA~GcI~aE 202 (538)
T KOG0661|consen 168 EYVSTRWYRAPEVLLRSGYYSSPVDMWAVGCIMAE 202 (538)
T ss_pred hhhhcccccchHHhhhccccCCchHHHHHHHHHHH
Confidence 2299999999999
No 18
>KOG0616|consensus
Probab=99.92 E-value=1.2e-25 Score=199.18 Aligned_cols=149 Identities=18% Similarity=0.254 Sum_probs=123.0
Q ss_pred eccCCCCCcceeEEEEEEEeecCcEEEEEEcCCCCh---hHHHHHHHHHHH-----------------------------
Q psy6828 47 LSSNPDSDFRYSAIFTPIGIYKGRIFAIKRIPKKSV---DITRAMKKELKI----------------------------- 94 (392)
Q Consensus 47 ~~~~~lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~~---~~~~~~~~E~~~----------------------------- 94 (392)
...+.||.|+||.|.+++++.+|..||+|++++... .+.+...+|..+
T Consensus 47 e~~~tlGtGSFGrV~LVr~k~~g~yYAmKvL~k~~vVklKQveH~~nEk~vL~~v~~PFlv~l~~t~~d~~~lymvmeyv 126 (355)
T KOG0616|consen 47 ERLKTLGTGSFGRVHLVREKHSGNYYAMKVLDKQKVVKLKQVEHTHNEKRVLKAVSHPFLVKLYGTFKDNSNLYMVMEYV 126 (355)
T ss_pred hheeeeccCccceEEEEEEccCCceeehhhcCHHHHHHHHHHHHHhhHHHHHhhccCceeEEEEEeeccCCeEEEEEecc
Confidence 446789999999999999999999999999998765 455666777766
Q ss_pred ------HHhhcCCcCCCHHHHHHHHHHHHHHHHHHhcCCcccccCCCCCceEEcCCceEEEeccccchhccccccccccc
Q psy6828 95 ------DIMENEDVKLDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLVDSRWVVKLADFGLTEFKRDAEYTGTDQ 168 (392)
Q Consensus 95 ------~~l~~~~~~l~~~~~~~i~~qi~~~l~ylH~~~iiiHrDlKp~NIll~~~~~~kl~DFGla~~~~~~~~~~~d~ 168 (392)
.+++.. ++|++..++.++.||+.||+|||++++ ++|||||+|||||.+|.+||+|||+|+.......+
T Consensus 127 ~GGElFS~Lrk~-~rF~e~~arFYAAeivlAleylH~~~i-iYRDLKPENiLlD~~G~iKitDFGFAK~v~~rT~T---- 200 (355)
T KOG0616|consen 127 PGGELFSYLRKS-GRFSEPHARFYAAEIVLALEYLHSLDI-IYRDLKPENLLLDQNGHIKITDFGFAKRVSGRTWT---- 200 (355)
T ss_pred CCccHHHHHHhc-CCCCchhHHHHHHHHHHHHHHHHhcCe-eeccCChHHeeeccCCcEEEEeccceEEecCcEEE----
Confidence 444433 379999999999999999999999999 99999999999999999999999999987765432
Q ss_pred cceeeeeeeccC----CCCcccccccccchhhhccCCH
Q psy6828 169 HSFLQHTYHVNR----AGSTESLHCKCDEALLFEMLPR 202 (392)
Q Consensus 169 ~s~g~~~~~~~~----~~~~~~~d~~~~~~lL~~~lp~ 202 (392)
-+|++.|.+|| .+++..+|+|..+.+++.|+..
T Consensus 201 -lCGTPeYLAPEii~sk~ynkavDWWalGVLIYEMlaG 237 (355)
T KOG0616|consen 201 -LCGTPEYLAPEIIQSKGYNKAVDWWALGVLIYEMLAG 237 (355)
T ss_pred -ecCCccccChHHhhcCCCCcchhHHHHHHHHHHHHcC
Confidence 23777777776 5566677888888887777643
No 19
>KOG3619|consensus
Probab=99.92 E-value=2.1e-25 Score=226.32 Aligned_cols=177 Identities=32% Similarity=0.584 Sum_probs=147.4
Q ss_pred ccchhhhccCCHHHHHHhhc----CCCccccccCceEEEeecccchhhhhccCCh----hhHHHhHHHHHHHHHHhhh--
Q psy6828 191 CDEALLFEMLPRSVAEQLRR----GTSVEAESFDSVTIYFSDIVGFTAMSAESTP----LQVVDFLNDLYTCFDSIVG-- 260 (392)
Q Consensus 191 ~~~~lL~~~lp~~v~~~l~~----~~~~~~~~~~~vtvlf~DI~~ft~l~~~~~p----~~l~~~Ln~~~~~~~~~v~-- 260 (392)
..+.+|.+++|.+++..... +.++..+.+..|.|+|+.+.+|..+..+.+. .+.+++||+++..||++..
T Consensus 616 ~Nr~LLeNiLPaHVA~HFl~~~~r~~eLY~qSy~~VgVMFASipnF~dFYsE~d~NneGlECLRlLNEIIaDFDeLL~~p 695 (867)
T KOG3619|consen 616 LNRLLLENILPSHVAAHFLGSKKRNEELYHQSYDCVGVMFASIPNFKDFYSECDVNNEGLECLRLLNEIIADFDELLSKP 695 (867)
T ss_pred HHHHHHHhcChHHHHHHHhhcccchHHHHHhhhceEEEEEEecCCcceeeeeecCCcccchHHHHHHHHHhhHHHhcCcc
Confidence 34668999999999997732 3466788899999999999999888766643 4899999999999999998
Q ss_pred hc-CeEEEeeeCceeeeccCCCcCCCCccccccccccceeeccceeEEEeCCCCCCChhhHHHHHHHHHHHHHHHHHhcc
Q psy6828 261 NY-DVYKVETIGDAYMVVSGLPIRNGEQHAVGNYDVYKVETIGDAYMVVSGLPIRNGEQHAGEIASMSLDLLEAVKRFTV 339 (392)
Q Consensus 261 ~~-~g~~~~~~Gd~~~a~~g~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~g~~~~~~~~~a~~a~~~a~~~~~~~~~~~~ 339 (392)
+| +.+++|++|-+|||+.|+.....++... | .+...|....+++|++|...++..|
T Consensus 696 kF~~IEKIKTIGSTYMAAsGL~~~~~~~~~~---------------------~-~~~~~h~~~l~eFAlal~~~L~~IN- 752 (867)
T KOG3619|consen 696 KFSGVEKIKTIGSTYMAASGLNPTSAQENDQ---------------------S-LRQWSHLGALVEFALALMHKLDEIN- 752 (867)
T ss_pred ccccceeEEEecchhhhhhCCChhhhhccCc---------------------c-hhHHhhHHHHHHHHHHHHHHHHhhh-
Confidence 55 5688999999998888886543222100 0 0224689999999999999999976
Q ss_pred cCCCCCCceEEEEeeccceeEeeeccCCceeeeecchHHHHHhhhhcCCCCC
Q psy6828 340 RHRPHDDLKLRIGIHSGPVCAGVVGLKMPRYCLFGDTVNTASRMESTGEDVV 391 (392)
Q Consensus 340 ~~~~~~~~~~~iGi~~G~v~~g~iG~~~~~y~~~G~~Vn~AsRle~~~~~g~ 391 (392)
....+.+++||||+.|||++|+||++||+||+||+|||+||||+|++.+|+
T Consensus 753 -~~SfNnF~LrIGin~GpvvAGVIGArKPqYDIWGNTVNvASRMdSTGv~g~ 803 (867)
T KOG3619|consen 753 -RHSFNNFELRIGINHGPVVAGVIGARKPQYDIWGNTVNVASRMDSTGVPGR 803 (867)
T ss_pred -HHhhccceeeeceeccceeeeEecCCCCCccccccchhhhhcccccCCCCe
Confidence 556788999999999999999999999999999999999999999999985
No 20
>KOG0660|consensus
Probab=99.92 E-value=4.1e-25 Score=201.13 Aligned_cols=125 Identities=22% Similarity=0.370 Sum_probs=104.0
Q ss_pred eccccccccceeeeccCCCCCcceeEEEEEEEeecCcEEEEEEcCC--CChhHHHHHHHHHHH-----------------
Q psy6828 34 CSWFQNVHTSQVSLSSNPDSDFRYSAIFTPIGIYKGRIFAIKRIPK--KSVDITRAMKKELKI----------------- 94 (392)
Q Consensus 34 ~~~~~~~~~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vAiK~~~~--~~~~~~~~~~~E~~~----------------- 94 (392)
..|.+.......|...+++|+|+||.|+.+.++.+|+.||||++.. ......++..+|+.+
T Consensus 12 ~~~~~~~~i~~~y~~~~~iG~GAyGvVcsA~~~~t~~~VAIKKi~~~F~~~~~akRtlRElklLr~~~HeNIi~l~di~~ 91 (359)
T KOG0660|consen 12 EVFGELFEIPRYYVLIEPIGRGAYGVVCSAKDKRTGEKVAIKKILNPFENQIDAKRTLRELKLLRHLRHENIIGLLDIFR 91 (359)
T ss_pred EeeeeEEeccceecccccccCcceeeEEEEEEcCCCCEeehhhhhhhhhchHHHHHHHHHHHHHHHhcCCCcceEEeecc
Confidence 4455555566777778999999999999999999999999999973 233445667777776
Q ss_pred --------------HH--------hhcCCcCCCHHHHHHHHHHHHHHHHHHhcCCcccccCCCCCceEEcCCceEEEecc
Q psy6828 95 --------------DI--------MENEDVKLDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLVDSRWVVKLADF 152 (392)
Q Consensus 95 --------------~~--------l~~~~~~l~~~~~~~i~~qi~~~l~ylH~~~iiiHrDlKp~NIll~~~~~~kl~DF 152 (392)
++ ++... .|++..+..+++|++.||+|+||.++ +||||||+|+|++.++.+||+||
T Consensus 92 p~~~~~f~DvYiV~elMetDL~~iik~~~-~L~d~H~q~f~YQiLrgLKyiHSAnV-iHRDLKPsNll~n~~c~lKI~DF 169 (359)
T KOG0660|consen 92 PPSRDKFNDVYLVFELMETDLHQIIKSQQ-DLTDDHAQYFLYQILRGLKYIHSANV-IHRDLKPSNLLLNADCDLKICDF 169 (359)
T ss_pred cccccccceeEEehhHHhhHHHHHHHcCc-cccHHHHHHHHHHHHHhcchhhcccc-cccccchhheeeccCCCEEeccc
Confidence 22 22222 49999999999999999999999999 99999999999999999999999
Q ss_pred ccchhccc
Q psy6828 153 GLTEFKRD 160 (392)
Q Consensus 153 Gla~~~~~ 160 (392)
|+|+....
T Consensus 170 GLAR~~~~ 177 (359)
T KOG0660|consen 170 GLARYLDK 177 (359)
T ss_pred cceeeccc
Confidence 99998753
No 21
>cd07302 CHD cyclase homology domain. Catalytic domains of the mononucleotidyl cyclases (MNC's), also called cyclase homology domains (CHDs), are part of the class III nucleotidyl cyclases. This class includes eukaryotic and prokaryotic adenylate cyclases (AC's) and guanylate cyclases (GC's). They seem to share a common catalytic mechanism in their requirement for two magnesium ions to bind the polyphosphate moiety of the nucleotide.
Probab=99.92 E-value=4.2e-24 Score=184.59 Aligned_cols=139 Identities=43% Similarity=0.670 Sum_probs=126.8
Q ss_pred ceEEEeecccchhhhhccCChhhHHHhHHHHHHHHHHhhhhcCeEEEeeeCceeeeccCCCcCCCCccccccccccceee
Q psy6828 221 SVTIYFSDIVGFTAMSAESTPLQVVDFLNDLYTCFDSIVGNYDVYKVETIGDAYMVVSGLPIRNGEQHAVGNYDVYKVET 300 (392)
Q Consensus 221 ~vtvlf~DI~~ft~l~~~~~p~~l~~~Ln~~~~~~~~~v~~~~g~~~~~~Gd~~~a~~g~~~~~~~~~~~~~~~~~~~~~ 300 (392)
+++++|.|+++|+.+.+..+++++..+++.++..+.+++.+|+|++.++.||++|++|+.|..
T Consensus 1 ~~~il~~di~~~t~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~g~~~~~~gd~~~~~f~~~~~----------------- 63 (177)
T cd07302 1 EVTVLFADIVGFTALSERLGPEELVELLNEYFSAFDEIIERHGGTVDKTIGDAVMAVFGLPGA----------------- 63 (177)
T ss_pred CEEEEEEEccChHHHHhcCCHHHHHHHHHHHHHHHHHHHHHcCCEEEEEeCceEEEEeCCCCC-----------------
Confidence 478999999999999999999999999999999999999999999999999999888887632
Q ss_pred ccceeEEEeCCCCCCChhhHHHHHHHHHHHHHHHHHhcccCCCCCCceEEEEeeccceeEeeeccCCceeeeecchHHHH
Q psy6828 301 IGDAYMVVSGLPIRNGEQHAGEIASMSLDLLEAVKRFTVRHRPHDDLKLRIGIHSGPVCAGVVGLKMPRYCLFGDTVNTA 380 (392)
Q Consensus 301 ~~d~~~~~~g~~~~~~~~~a~~a~~~a~~~~~~~~~~~~~~~~~~~~~~~iGi~~G~v~~g~iG~~~~~y~~~G~~Vn~A 380 (392)
.++++.+|+.+|+++++.+++++.......++++|||||+|++++|.+|..++.|+++|++||+|
T Consensus 64 ---------------~~~~~~~A~~~a~~i~~~~~~~~~~~~~~~~~~~riGi~~G~~~~g~~g~~~~~~~~~G~~v~~A 128 (177)
T cd07302 64 ---------------HEDHAERAVRAALEMQEALAELNAEREGGPPLRLRIGIHTGPVVAGVVGSERPEYTVIGDTVNLA 128 (177)
T ss_pred ---------------chhHHHHHHHHHHHHHHHHHHHhhcccCCCCeEEEEEEecceEEEEecCCCCcceeEecchHhHH
Confidence 34689999999999999999987554456789999999999999999999966999999999999
Q ss_pred HhhhhcCCCCC
Q psy6828 381 SRMESTGEDVV 391 (392)
Q Consensus 381 sRle~~~~~g~ 391 (392)
+||++.+++|.
T Consensus 129 ~rl~~~a~~~~ 139 (177)
T cd07302 129 ARLESLAKPGQ 139 (177)
T ss_pred HHHHhcCCCCE
Confidence 99999999874
No 22
>KOG0585|consensus
Probab=99.91 E-value=4.4e-25 Score=206.62 Aligned_cols=113 Identities=24% Similarity=0.361 Sum_probs=97.4
Q ss_pred eeeccCCCCCcceeEEEEEEEeecCcEEEEEEcCCCCh--------------hHHHHHHHHHHH----------------
Q psy6828 45 VSLSSNPDSDFRYSAIFTPIGIYKGRIFAIKRIPKKSV--------------DITRAMKKELKI---------------- 94 (392)
Q Consensus 45 ~~~~~~~lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~~--------------~~~~~~~~E~~~---------------- 94 (392)
.|.....||+|.||+|.+|++..+++.||||++++... ...+...+|+.+
T Consensus 98 qy~l~~eiG~G~yGkVkLar~~~~~~l~AiKil~K~~~~~~~~~~~~~a~~~~~~ekv~~EIailKkl~H~nVV~LiEvL 177 (576)
T KOG0585|consen 98 QYELIKEIGSGQYGKVKLARDEVDGKLYAIKILPKKELRRQYGFPRQPAMKLMPIEKVRREIAILKKLHHPNVVKLIEVL 177 (576)
T ss_pred heehhhhhcCCccceEEEEeecCCCcEEEEEeechhhhhhhcccccccccccCcHHHHHHHHHHHHhcCCcCeeEEEEee
Confidence 36778899999999999999999999999999987543 134678899988
Q ss_pred ------------HHhhcCC-------cC-CCHHHHHHHHHHHHHHHHHHhcCCcccccCCCCCceEEcCCceEEEecccc
Q psy6828 95 ------------DIMENED-------VK-LDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLVDSRWVVKLADFGL 154 (392)
Q Consensus 95 ------------~~l~~~~-------~~-l~~~~~~~i~~qi~~~l~ylH~~~iiiHrDlKp~NIll~~~~~~kl~DFGl 154 (392)
+|+..+. .. +++.+++.|+++++.||+|||.+|| |||||||+|+|++++|++||+|||.
T Consensus 178 DDP~s~~~YlVley~s~G~v~w~p~d~~els~~~Ar~ylrDvv~GLEYLH~Qgi-iHRDIKPsNLLl~~~g~VKIsDFGV 256 (576)
T KOG0585|consen 178 DDPESDKLYLVLEYCSKGEVKWCPPDKPELSEQQARKYLRDVVLGLEYLHYQGI-IHRDIKPSNLLLSSDGTVKISDFGV 256 (576)
T ss_pred cCcccCceEEEEEeccCCccccCCCCcccccHHHHHHHHHHHHHHHHHHHhcCe-eccccchhheEEcCCCcEEeeccce
Confidence 3433322 13 8999999999999999999999999 9999999999999999999999999
Q ss_pred chhc
Q psy6828 155 TEFK 158 (392)
Q Consensus 155 a~~~ 158 (392)
+...
T Consensus 257 s~~~ 260 (576)
T KOG0585|consen 257 SNEF 260 (576)
T ss_pred eeec
Confidence 8754
No 23
>KOG0663|consensus
Probab=99.91 E-value=5.2e-25 Score=198.05 Aligned_cols=115 Identities=25% Similarity=0.351 Sum_probs=96.7
Q ss_pred eccCCCCCcceeEEEEEEEeecCcEEEEEEcCCCCh--hHHHHHHHHHHH------------------------------
Q psy6828 47 LSSNPDSDFRYSAIFTPIGIYKGRIFAIKRIPKKSV--DITRAMKKELKI------------------------------ 94 (392)
Q Consensus 47 ~~~~~lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~~--~~~~~~~~E~~~------------------------------ 94 (392)
...+.|++|+||.||+|+++.|++.||+|+++-..- ..----.+|+.+
T Consensus 79 e~lnrI~EGtyGiVYRakdk~t~eIVALKr~kmekek~GFPItsLREIniLl~~~H~NIV~vkEVVvG~~~d~iy~VMe~ 158 (419)
T KOG0663|consen 79 EKLNRIEEGTYGVVYRAKDKKTDEIVALKRLKMEKEKEGFPITSLREINILLKARHPNIVEVKEVVVGSNMDKIYIVMEY 158 (419)
T ss_pred HHHhhcccCcceeEEEeccCCcceeEEeeecccccccCCCcchhHHHHHHHHhcCCCCeeeeEEEEeccccceeeeeHHH
Confidence 346789999999999999999999999999974431 111123556665
Q ss_pred ------HHhhcCCcCCCHHHHHHHHHHHHHHHHHHhcCCcccccCCCCCceEEcCCceEEEeccccchhccccc
Q psy6828 95 ------DIMENEDVKLDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLVDSRWVVKLADFGLTEFKRDAE 162 (392)
Q Consensus 95 ------~~l~~~~~~l~~~~~~~i~~qi~~~l~ylH~~~iiiHrDlKp~NIll~~~~~~kl~DFGla~~~~~~~ 162 (392)
.++++...+|+..++..++.|++.|++|||.+.| +||||||+|+|+++.|.+||+|||+|+.+.+..
T Consensus 159 ~EhDLksl~d~m~q~F~~~evK~L~~QlL~glk~lH~~wi-lHRDLK~SNLLm~~~G~lKiaDFGLAR~ygsp~ 231 (419)
T KOG0663|consen 159 VEHDLKSLMETMKQPFLPGEVKTLMLQLLRGLKHLHDNWI-LHRDLKTSNLLLSHKGILKIADFGLAREYGSPL 231 (419)
T ss_pred HHhhHHHHHHhccCCCchHHHHHHHHHHHHHHHHHhhcee-EecccchhheeeccCCcEEecccchhhhhcCCc
Confidence 5555666689999999999999999999999999 999999999999999999999999999887653
No 24
>KOG0594|consensus
Probab=99.91 E-value=1.3e-24 Score=198.23 Aligned_cols=110 Identities=26% Similarity=0.444 Sum_probs=89.1
Q ss_pred cCCCCCcceeEEEEEEEeecCcEEEEEEcCCCChh--HHHHHHHHHHH--------------------------------
Q psy6828 49 SNPDSDFRYSAIFTPIGIYKGRIFAIKRIPKKSVD--ITRAMKKELKI-------------------------------- 94 (392)
Q Consensus 49 ~~~lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~~~--~~~~~~~E~~~-------------------------------- 94 (392)
.+.+|+|+||+||+|+.+.+|+.||+|+++-...+ .-....+|+.+
T Consensus 16 ~eklGeGtyg~Vykar~~~~g~~VALKkirl~~~~EG~P~taiREisllk~L~~~~~iv~L~dv~~~~~~~~~~~~l~lv 95 (323)
T KOG0594|consen 16 VEKLGEGTYGVVYKARSKRTGKFVALKKIRLEFEEEGVPSTAIREISLLKRLSHANHIVRLHDVIHTSNNHRGIGKLYLV 95 (323)
T ss_pred HHHhCCCCceEEEEEEEecCCCEEEEEEEeccccccCCCchhhHHHHHHHHhCCCcceEEEEeeeeecccccccceEEEE
Confidence 45699999999999999999999999999754321 11122333333
Q ss_pred ---------HHhhcCC---cCCCHHHHHHHHHHHHHHHHHHhcCCcccccCCCCCceEEcCCceEEEeccccchhcc
Q psy6828 95 ---------DIMENED---VKLDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLVDSRWVVKLADFGLTEFKR 159 (392)
Q Consensus 95 ---------~~l~~~~---~~l~~~~~~~i~~qi~~~l~ylH~~~iiiHrDlKp~NIll~~~~~~kl~DFGla~~~~ 159 (392)
.|+.... ..++...++.+++||+.||.|||+++| +||||||+|||++++|.+||+|||+|+...
T Consensus 96 fe~~d~DL~~ymd~~~~~~~g~~~~~ik~~m~Qll~gl~~~H~~~I-lHRDLKPQNlLi~~~G~lKlaDFGlAra~~ 171 (323)
T KOG0594|consen 96 FEFLDRDLKKYMDSLPKKPQGLPPRLIKSFMRQLLRGLAFLHSHGI-LHRDLKPQNLLISSSGVLKLADFGLARAFS 171 (323)
T ss_pred EEeecccHHHHHHhccccccCCCHHHHHHHHHHHHHHHHHHHhCCe-ecccCCcceEEECCCCcEeeeccchHHHhc
Confidence 4444433 247778899999999999999999999 999999999999999999999999999655
No 25
>KOG0605|consensus
Probab=99.90 E-value=1.8e-24 Score=205.53 Aligned_cols=110 Identities=20% Similarity=0.288 Sum_probs=95.9
Q ss_pred eeccCCCCCcceeEEEEEEEeecCcEEEEEEcCCCCh---hHHHHHHHHHHH--------------------------HH
Q psy6828 46 SLSSNPDSDFRYSAIFTPIGIYKGRIFAIKRIPKKSV---DITRAMKKELKI--------------------------DI 96 (392)
Q Consensus 46 ~~~~~~lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~~---~~~~~~~~E~~~--------------------------~~ 96 (392)
+....+||+|+||.||+|+.+.||+.||+|++++..+ .+.+.++.|..+ +|
T Consensus 143 Fe~Lk~IgkGAfGeVrLarKk~Tg~iyAmK~LkKS~M~~~~Qv~hV~aERdiL~~~ds~~vVKLyYsFQD~~~LYLiMEy 222 (550)
T KOG0605|consen 143 FELLKVIGKGAFGEVRLARKKDTGEIYAMKILKKSEMLKKNQVEHVRAERDILAEVDSPWVVKLYYSFQDKEYLYLIMEY 222 (550)
T ss_pred chhheeeccccceeEEEEEEccCCcEEeeecccHHHHHhhhhHHHHHHHHHHhhhcCCCcEEEEEEEecCCCeeEEEEEe
Confidence 3446789999999999999999999999999998876 455667777777 23
Q ss_pred ---------hhcCCcCCCHHHHHHHHHHHHHHHHHHhcCCcccccCCCCCceEEcCCceEEEeccccchh
Q psy6828 97 ---------MENEDVKLDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLVDSRWVVKLADFGLTEF 157 (392)
Q Consensus 97 ---------l~~~~~~l~~~~~~~i~~qi~~~l~ylH~~~iiiHrDlKp~NIll~~~~~~kl~DFGla~~ 157 (392)
+.+.+ .|++..++.++.+++.|+.-||+.|+ |||||||+|+|||..|++||+|||||.-
T Consensus 223 lPGGD~mTLL~~~~-~L~e~~arfYiaE~vlAI~~iH~~gy-IHRDIKPdNlLiD~~GHiKLSDFGLs~g 290 (550)
T KOG0605|consen 223 LPGGDMMTLLMRKD-TLTEDWARFYIAETVLAIESIHQLGY-IHRDIKPDNLLIDAKGHIKLSDFGLSTG 290 (550)
T ss_pred cCCccHHHHHHhcC-cCchHHHHHHHHHHHHHHHHHHHcCc-ccccCChhheeecCCCCEeeccccccch
Confidence 33333 69999999999999999999999999 9999999999999999999999999964
No 26
>KOG0658|consensus
Probab=99.90 E-value=2e-24 Score=196.94 Aligned_cols=127 Identities=20% Similarity=0.263 Sum_probs=100.1
Q ss_pred eeccCCCCCcceeEEEEEEEeecCcEEEEEEcCCCChhHHHHHHHHHHH-------------------------------
Q psy6828 46 SLSSNPDSDFRYSAIFTPIGIYKGRIFAIKRIPKKSVDITRAMKKELKI------------------------------- 94 (392)
Q Consensus 46 ~~~~~~lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~~~~~~~~~~E~~~------------------------------- 94 (392)
+...+.+|.|+||.||+|....+++.||||+.-+... .-.+|+++
T Consensus 26 ~~~~~liG~GsFg~Vyq~~~~e~~~~vAIKKv~~d~r----~knrEl~im~~l~HpNIV~L~~~f~~~~~~d~~~lnlVl 101 (364)
T KOG0658|consen 26 YEAVRLIGSGSFGVVYQAKLRETEEEVAIKKVLQDKR----YKNRELQIMRKLDHPNIVRLLYFFSSSTESDEVYLNLVL 101 (364)
T ss_pred EEeeEEEeecccceEEEEEEcCCCceeEEEEecCCCC----cCcHHHHHHHhcCCcCeeeEEEEEEecCCCchhHHHHHH
Confidence 4557789999999999999999999999999854432 11122222
Q ss_pred --------HHhh---cCCcCCCHHHHHHHHHHHHHHHHHHhcCCcccccCCCCCceEEcCC-ceEEEeccccchhccccc
Q psy6828 95 --------DIME---NEDVKLDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLVDSR-WVVKLADFGLTEFKRDAE 162 (392)
Q Consensus 95 --------~~l~---~~~~~l~~~~~~~i~~qi~~~l~ylH~~~iiiHrDlKp~NIll~~~-~~~kl~DFGla~~~~~~~ 162 (392)
++++ ..+.+++...++.++.||++||.|||+.+| +||||||+|+|+|.+ |.+||||||.|+.+..++
T Consensus 102 eymP~tL~~~~r~~~~~~~~mp~~~iKLYt~Qlfrgl~yLh~~~I-cHRDIKPqNlLvD~~tg~LKicDFGSAK~L~~~e 180 (364)
T KOG0658|consen 102 EYMPETLYRVIRHYTRANQRMPLLEIKLYTYQLFRGLAYLHSHGI-CHRDIKPQNLLVDPDTGVLKICDFGSAKVLVKGE 180 (364)
T ss_pred HhchHHHHHHHHHHhhcCCCCceeeeHHHHHHHHHHHHHHHhcCc-ccCCCChheEEEcCCCCeEEeccCCcceeeccCC
Confidence 2222 123478889999999999999999999999 999999999999977 999999999999875544
Q ss_pred cc-----------------------cccccceeeeeee
Q psy6828 163 YT-----------------------GTDQHSFLQHTYH 177 (392)
Q Consensus 163 ~~-----------------------~~d~~s~g~~~~~ 177 (392)
.. ..|+||.||++-|
T Consensus 181 pniSYicSRyYRaPELifga~~Yt~~IDiWSaGCV~aE 218 (364)
T KOG0658|consen 181 PNISYICSRYYRAPELIFGATEYTTSIDIWSAGCVMAE 218 (364)
T ss_pred CceeEEEeccccCHHHHcCccccCceeEEhhhhHHHHH
Confidence 32 2288888888877
No 27
>KOG0597|consensus
Probab=99.90 E-value=6.6e-24 Score=202.29 Aligned_cols=149 Identities=21% Similarity=0.304 Sum_probs=117.4
Q ss_pred ccCCCCCcceeEEEEEEEeecCcEEEEEEcCCCCh--hHHHHHHHHHHH-------------------------------
Q psy6828 48 SSNPDSDFRYSAIFTPIGIYKGRIFAIKRIPKKSV--DITRAMKKELKI------------------------------- 94 (392)
Q Consensus 48 ~~~~lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~~--~~~~~~~~E~~~------------------------------- 94 (392)
...-+|+|+||.||+|+.+.+.+.||||.+.|... ...+.+.+|++|
T Consensus 6 v~e~iG~Gsfg~VYKgrrK~t~~~vAik~i~K~gr~~k~l~~l~~ev~i~r~lkHpniv~m~esfEt~~~~~vVte~a~g 85 (808)
T KOG0597|consen 6 VYEMIGEGSFGRVYKGRRKYTIQVVAIKFIDKSGRNEKELKNLRQEVRILRSLKHPNIVEMLESFETSAHLWVVTEYAVG 85 (808)
T ss_pred HHHHhcCCccceeeecccccceeEEEEEEehhcCCchHHHHHHHHHHHHHHhcCCcchhhHHHhhcccceEEEEehhhhh
Confidence 34568999999999999999999999999987654 345667888887
Q ss_pred ---HHhhcCCcCCCHHHHHHHHHHHHHHHHHHhcCCcccccCCCCCceEEcCCceEEEeccccchhccccccccccccce
Q psy6828 95 ---DIMENEDVKLDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLVDSRWVVKLADFGLTEFKRDAEYTGTDQHSF 171 (392)
Q Consensus 95 ---~~l~~~~~~l~~~~~~~i~~qi~~~l~ylH~~~iiiHrDlKp~NIll~~~~~~kl~DFGla~~~~~~~~~~~d~~s~ 171 (392)
.+++. ++.++|+.++.+..|+++||.|||+.+| +|||+||.|||++..|.+|+||||+++.+..+....+.+-
T Consensus 86 ~L~~il~~-d~~lpEe~v~~~a~~LVsaL~yLhs~ri-lhrd~kPqniLl~~~~~~KlcdFg~Ar~m~~~t~vltsik-- 161 (808)
T KOG0597|consen 86 DLFTILEQ-DGKLPEEQVRAIAYDLVSALYYLHSNRI-LHRDMKPQNILLEKGGTLKLCDFGLARAMSTNTSVLTSIK-- 161 (808)
T ss_pred hHHHHHHh-ccCCCHHHHHHHHHHHHHHHHHHHhcCc-ccccCCcceeeecCCCceeechhhhhhhcccCceeeeecc--
Confidence 33333 3379999999999999999999999999 9999999999999999999999999998877654433332
Q ss_pred eeeeeeccC----CCCcccccccccchhhhccC
Q psy6828 172 LQHTYHVNR----AGSTESLHCKCDEALLFEML 200 (392)
Q Consensus 172 g~~~~~~~~----~~~~~~~d~~~~~~lL~~~l 200 (392)
|+++|++|+ .++....|.|+.+.+++++.
T Consensus 162 GtPlYmAPElv~e~pyd~~sDlWslGcilYE~~ 194 (808)
T KOG0597|consen 162 GTPLYMAPELVEEQPYDHTSDLWSLGCILYELY 194 (808)
T ss_pred CcccccCHHHHcCCCccchhhHHHHHHHHHHHh
Confidence 566666544 44444555566666666554
No 28
>KOG0611|consensus
Probab=99.89 E-value=2.2e-24 Score=198.27 Aligned_cols=133 Identities=23% Similarity=0.324 Sum_probs=112.5
Q ss_pred ceeeeccCCCCCcceeEEEEEEEeecCcEEEEEEcCCCCh---hHHHHHHHHHHH-------------------------
Q psy6828 43 SQVSLSSNPDSDFRYSAIFTPIGIYKGRIFAIKRIPKKSV---DITRAMKKELKI------------------------- 94 (392)
Q Consensus 43 ~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~~---~~~~~~~~E~~~------------------------- 94 (392)
..+|.....||+|+||+|-++++...|+.||||.+++..+ +..-.+.+|++|
T Consensus 52 kHRyE~~etLGkGTYGKVk~A~e~~sgR~VAiKsIrKdkIkdeqDlvhIRREIeIMSsLNHPhII~IyEVFENkdKIviv 131 (668)
T KOG0611|consen 52 KHRYEITETLGKGTYGKVKLAYEHKSGREVAIKSIRKDKIKDEQDLVHIRREIEIMSSLNHPHIIQIYEVFENKDKIVIV 131 (668)
T ss_pred hhHHHHHHHhcCCcccceeehhhccCCcEeehhhhhhhhcccHHHHHHHHHHHHHHhhcCCCceeehhhhhcCCceEEEE
Confidence 3456677889999999999999999999999999988765 456678999998
Q ss_pred ----------HHhhcCCcCCCHHHHHHHHHHHHHHHHHHhcCCcccccCCCCCceEEcCCceEEEeccccchhccccccc
Q psy6828 95 ----------DIMENEDVKLDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLVDSRWVVKLADFGLTEFKRDAEYT 164 (392)
Q Consensus 95 ----------~~l~~~~~~l~~~~~~~i~~qi~~~l~ylH~~~iiiHrDlKp~NIll~~~~~~kl~DFGla~~~~~~~~~ 164 (392)
+|+.... .|++.+++.+++||.+|+.|+|.+++ +|||||.+|||||.++++||+|||++-.+......
T Consensus 132 MEYaS~GeLYDYiSer~-~LsErEaRhfFRQIvSAVhYCHknrV-vHRDLKLENILLD~N~NiKIADFGLSNly~~~kfL 209 (668)
T KOG0611|consen 132 MEYASGGELYDYISERG-SLSEREARHFFRQIVSAVHYCHKNRV-VHRDLKLENILLDQNNNIKIADFGLSNLYADKKFL 209 (668)
T ss_pred EEecCCccHHHHHHHhc-cccHHHHHHHHHHHHHHHHHHhhccc-eecccchhheeecCCCCeeeeccchhhhhccccHH
Confidence 4444333 69999999999999999999999999 99999999999999999999999999876543322
Q ss_pred c-----------------------ccccceeeeeee
Q psy6828 165 G-----------------------TDQHSFLQHTYH 177 (392)
Q Consensus 165 ~-----------------------~d~~s~g~~~~~ 177 (392)
. .|.||+|+++|.
T Consensus 210 qTFCGSPLYASPEIvNG~PY~GPEVDsWsLGvLLYt 245 (668)
T KOG0611|consen 210 QTFCGSPLYASPEIVNGTPYKGPEVDSWSLGVLLYT 245 (668)
T ss_pred HHhcCCcccCCccccCCCCCCCCccchhhHHHHHHH
Confidence 1 178888888876
No 29
>KOG0583|consensus
Probab=99.89 E-value=1.6e-23 Score=200.91 Aligned_cols=114 Identities=23% Similarity=0.310 Sum_probs=98.3
Q ss_pred ceeeeccCCCCCcceeEEEEEEEeecCcEEEEEEcCCCC----h-hHHHHHHHHHHH-----------------------
Q psy6828 43 SQVSLSSNPDSDFRYSAIFTPIGIYKGRIFAIKRIPKKS----V-DITRAMKKELKI----------------------- 94 (392)
Q Consensus 43 ~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~----~-~~~~~~~~E~~~----------------------- 94 (392)
...|...+.||+|+||+|+.|.+..+++.||+|++++.. . ...+.+.+|+.+
T Consensus 16 ~g~y~~~~~lG~GsfgkV~~a~~~~t~~~vAiKii~~~~~~~~~~~~~~~i~rEi~~~~~~~~HpnI~~l~ev~~t~~~~ 95 (370)
T KOG0583|consen 16 IGKYELGRTLGSGSFGKVKLAKHRLTGEKVAIKIIDRKKVSSKSQKLDELIKREISILRRLRSHPNIIRLLEVFATPTKI 95 (370)
T ss_pred cCceeeeeeecCCCCeeEEEeeeccCCCeEEEEEechhcccccccccchhhHHHHHHHHHhccCCCEeEEEEEEecCCeE
Confidence 456788999999999999999999999999999887642 1 234456677765
Q ss_pred -------------HHhhcCCcCCCHHHHHHHHHHHHHHHHHHhcCCcccccCCCCCceEEcCC-ceEEEeccccchhc
Q psy6828 95 -------------DIMENEDVKLDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLVDSR-WVVKLADFGLTEFK 158 (392)
Q Consensus 95 -------------~~l~~~~~~l~~~~~~~i~~qi~~~l~ylH~~~iiiHrDlKp~NIll~~~-~~~kl~DFGla~~~ 158 (392)
+++.+ .+++++.+++.+++|+++|+.|||++++ +||||||+|||++.+ +++||+|||++...
T Consensus 96 ~ivmEy~~gGdL~~~i~~-~g~l~E~~ar~~F~Qlisav~y~H~~gi-~HRDLK~ENilld~~~~~~Kl~DFG~s~~~ 171 (370)
T KOG0583|consen 96 YIVMEYCSGGDLFDYIVN-KGRLKEDEARKYFRQLISAVAYCHSRGI-VHRDLKPENILLDGNEGNLKLSDFGLSAIS 171 (370)
T ss_pred EEEEEecCCccHHHHHHH-cCCCChHHHHHHHHHHHHHHHHHHhCCE-eeCCCCHHHEEecCCCCCEEEecccccccc
Confidence 44445 4489999999999999999999999999 999999999999999 99999999999977
No 30
>KOG0694|consensus
Probab=99.89 E-value=2.5e-23 Score=203.04 Aligned_cols=153 Identities=19% Similarity=0.185 Sum_probs=122.8
Q ss_pred eeccCCCCCcceeEEEEEEEeecCcEEEEEEcCCCCh---hHHHHHHHHHHH---------------------------H
Q psy6828 46 SLSSNPDSDFRYSAIFTPIGIYKGRIFAIKRIPKKSV---DITRAMKKELKI---------------------------D 95 (392)
Q Consensus 46 ~~~~~~lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~~---~~~~~~~~E~~~---------------------------~ 95 (392)
+...+.||+|+||+|+++..+.+++.||||.++|..+ +..+....|..| +
T Consensus 370 F~~l~vLGkGsFGkV~lae~k~~~e~yAIK~LKK~~Il~~d~Ve~~~~EkrI~~la~~HPFL~~L~~~fQT~~~l~fvme 449 (694)
T KOG0694|consen 370 FRLLAVLGRGSFGKVLLAELKGTNEYYAIKVLKKGDILQRDEVESLMCEKRIFELANRHPFLVNLFSCFQTKEHLFFVME 449 (694)
T ss_pred eEEEEEeccCcCceEEEEEEcCCCcEEEEEEeeccceeccccHHHHHHHHHHHHHhccCCeEeecccccccCCeEEEEEE
Confidence 3446789999999999999999999999999998865 456667777777 3
Q ss_pred HhhcC-------CcCCCHHHHHHHHHHHHHHHHHHhcCCcccccCCCCCceEEcCCceEEEeccccchhccccccccccc
Q psy6828 96 IMENE-------DVKLDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLVDSRWVVKLADFGLTEFKRDAEYTGTDQ 168 (392)
Q Consensus 96 ~l~~~-------~~~l~~~~~~~i~~qi~~~l~ylH~~~iiiHrDlKp~NIll~~~~~~kl~DFGla~~~~~~~~~~~d~ 168 (392)
|...+ ...|++..++.|+.+++.||+|||+++| |+||||.+|||||.+|.+||+|||+++..-..... .-
T Consensus 450 y~~Ggdm~~~~~~~~F~e~rarfyaAev~l~L~fLH~~~I-IYRDlKLdNiLLD~eGh~kiADFGlcKe~m~~g~~--Ts 526 (694)
T KOG0694|consen 450 YVAGGDLMHHIHTDVFSEPRARFYAAEVVLGLQFLHENGI-IYRDLKLDNLLLDTEGHVKIADFGLCKEGMGQGDR--TS 526 (694)
T ss_pred ecCCCcEEEEEecccccHHHHHHHHHHHHHHHHHHHhcCc-eeeecchhheEEcccCcEEecccccccccCCCCCc--cc
Confidence 33222 2369999999999999999999999999 99999999999999999999999999865432221 12
Q ss_pred cceeeeeeeccC----CCCcccccccccchhhhccCC
Q psy6828 169 HSFLQHTYHVNR----AGSTESLHCKCDEALLFEMLP 201 (392)
Q Consensus 169 ~s~g~~~~~~~~----~~~~~~~d~~~~~~lL~~~lp 201 (392)
.-.|++-|++|+ ..|+..+|+|..+.|+++||-
T Consensus 527 TfCGTpey~aPEil~e~~Yt~aVDWW~lGVLlyeML~ 563 (694)
T KOG0694|consen 527 TFCGTPEFLAPEVLTEQSYTRAVDWWGLGVLLYEMLV 563 (694)
T ss_pred cccCChhhcChhhhccCcccchhhHHHHHHHHHHHHc
Confidence 235777787665 566777888888888887763
No 31
>KOG4236|consensus
Probab=99.89 E-value=3.2e-23 Score=196.09 Aligned_cols=137 Identities=25% Similarity=0.295 Sum_probs=114.2
Q ss_pred cCCCCCcceeEEEEEEEeecCcEEEEEEcCCCCh--hHHHHHHHHHHH--------------------------------
Q psy6828 49 SNPDSDFRYSAIFTPIGIYKGRIFAIKRIPKKSV--DITRAMKKELKI-------------------------------- 94 (392)
Q Consensus 49 ~~~lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~~--~~~~~~~~E~~~-------------------------------- 94 (392)
.+.||.|.||+||-|.++.+|+.||||++++... ...+.+++|+.|
T Consensus 569 devLGSGQFG~VYgg~hRktGrdVAvKvIdKlrFp~kqesqlR~EVaILq~l~HPGiV~le~M~ET~ervFVVMEKl~GD 648 (888)
T KOG4236|consen 569 DEVLGSGQFGTVYGGKHRKTGRDVAVKVIDKLRFPTKQESQLRNEVAILQNLHHPGIVNLECMFETPERVFVVMEKLHGD 648 (888)
T ss_pred HhhccCCcceeeecceecccCceeeeeeeecccCCCchHHHHHHHHHHHHhcCCCCeeEEEEeecCCceEEEEehhhcch
Confidence 5679999999999999999999999999987544 445778899888
Q ss_pred ---HHhhcCCcCCCHHHHHHHHHHHHHHHHHHhcCCcccccCCCCCceEEcCC---ceEEEeccccchhcccccccc---
Q psy6828 95 ---DIMENEDVKLDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLVDSR---WVVKLADFGLTEFKRDAEYTG--- 165 (392)
Q Consensus 95 ---~~l~~~~~~l~~~~~~~i~~qi~~~l~ylH~~~iiiHrDlKp~NIll~~~---~~~kl~DFGla~~~~~~~~~~--- 165 (392)
-++....++|++.....++.||+.||.|||-+|| +|.||||+|+||.+. -++||||||+++++.+.....
T Consensus 649 MLEMILSsEkgRL~er~TkFlvtQIL~ALr~LH~knI-vHCDLKPENVLLas~~~FPQvKlCDFGfARiIgEksFRrsVV 727 (888)
T KOG4236|consen 649 MLEMILSSEKGRLPERITKFLVTQILVALRYLHFKNI-VHCDLKPENVLLASASPFPQVKLCDFGFARIIGEKSFRRSVV 727 (888)
T ss_pred HHHHHHHhhcccchHHHHHHHHHHHHHHHHHhhhcce-eeccCCchheeeccCCCCCceeeccccceeecchhhhhhhhc
Confidence 2333455689999999999999999999999999 999999999999765 469999999999887655332
Q ss_pred -------------------ccccceeeeeee--ccCCCCccc
Q psy6828 166 -------------------TDQHSFLQHTYH--VNRAGSTES 186 (392)
Q Consensus 166 -------------------~d~~s~g~~~~~--~~~~~~~~~ 186 (392)
.|+||.|++.|- ...|++++.
T Consensus 728 GTPAYLaPEVLrnkGyNrSLDMWSVGVIiYVsLSGTFPFNEd 769 (888)
T KOG4236|consen 728 GTPAYLAPEVLRNKGYNRSLDMWSVGVIIYVSLSGTFPFNED 769 (888)
T ss_pred CCccccCHHHHhhccccccccceeeeEEEEEEecccccCCCc
Confidence 289999999988 445666663
No 32
>KOG0591|consensus
Probab=99.89 E-value=2e-23 Score=183.96 Aligned_cols=117 Identities=17% Similarity=0.279 Sum_probs=94.4
Q ss_pred eeccCCCCCcceeEEEEEEEeecCcEEEEEEcCCCCh--hHHHHHHHHHHH-----------------------------
Q psy6828 46 SLSSNPDSDFRYSAIFTPIGIYKGRIFAIKRIPKKSV--DITRAMKKELKI----------------------------- 94 (392)
Q Consensus 46 ~~~~~~lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~~--~~~~~~~~E~~~----------------------------- 94 (392)
|.....+|+|+||+||++.+..+|..+|.|.++-..+ ...+....|+.+
T Consensus 21 y~Il~~IG~GsFg~vykv~~~~~g~l~a~K~i~f~~md~k~rq~~v~Ei~lLkQL~HpNIVqYy~~~f~~~~evlnivmE 100 (375)
T KOG0591|consen 21 YQILKKIGRGSFGEVYKVQCLLDGKLVALKKIQFGMMDAKARQDCVKEISLLKQLNHPNIVQYYAHSFIEDNEVLNIVME 100 (375)
T ss_pred HHHHHHHcCCcchheEEeeeccCcchhhhhhcchhhccHHHHHHHHHHHHHHHhcCCchHHHHHHHhhhccchhhHHHHH
Confidence 4446679999999999999999999999999974433 233445556555
Q ss_pred -----------HHhhcCCcCCCHHHHHHHHHHHHHHHHHHhc--C-CcccccCCCCCceEEcCCceEEEeccccchhccc
Q psy6828 95 -----------DIMENEDVKLDNMFIASLVADILRGMLYLHD--S-ALRYHGNLKASNCLVDSRWVVKLADFGLTEFKRD 160 (392)
Q Consensus 95 -----------~~l~~~~~~l~~~~~~~i~~qi~~~l~ylH~--~-~iiiHrDlKp~NIll~~~~~~kl~DFGla~~~~~ 160 (392)
...+.....+++..++.++.|++.||.++|+ . +.++||||||.||+|+.+|.+||+|||+++++.+
T Consensus 101 ~c~~GDLsqmIk~~K~qkr~ipE~~Vwk~f~QL~~AL~~cH~~~~r~~VmHRDIKPaNIFl~~~gvvKLGDfGL~r~l~s 180 (375)
T KOG0591|consen 101 LCDAGDLSQMIKHFKKQKRLIPEKTVWKYFVQLCRALYHCHSKIPRGTVMHRDIKPANIFLTANGVVKLGDFGLGRFLSS 180 (375)
T ss_pred hhcccCHHHHHHHHHhccccCchHHHHHHHHHHHHHHHHHhccccccceeeccCcchheEEcCCCceeeccchhHhHhcc
Confidence 2222233469999999999999999999998 3 3349999999999999999999999999998765
Q ss_pred cc
Q psy6828 161 AE 162 (392)
Q Consensus 161 ~~ 162 (392)
..
T Consensus 181 ~~ 182 (375)
T KOG0591|consen 181 KT 182 (375)
T ss_pred hh
Confidence 43
No 33
>KOG0667|consensus
Probab=99.89 E-value=7.8e-23 Score=199.17 Aligned_cols=134 Identities=23% Similarity=0.306 Sum_probs=109.7
Q ss_pred cceeeeccCCCCCcceeEEEEEEEeecCcEEEEEEcCCCChhHHHHHHHHHHH---------------------------
Q psy6828 42 TSQVSLSSNPDSDFRYSAIFTPIGIYKGRIFAIKRIPKKSVDITRAMKKELKI--------------------------- 94 (392)
Q Consensus 42 ~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~~~~~~~~~~E~~~--------------------------- 94 (392)
...+|.....||+|+||.|.+|.+..|++.||||+++... ....+...|+.+
T Consensus 184 i~~rY~V~e~LGkGtFGQVvk~~d~~T~e~VAIKIiKN~k-~f~~Q~~~Ei~iL~~ln~~d~~~~~n~Vrm~d~F~fr~H 262 (586)
T KOG0667|consen 184 IAYRYEVLEVLGKGSFGQVVKAYDHKTGEIVAIKIIKNKK-RFLRQAQIEIRILELLNKHDPDDKYNIVRMLDYFYFRNH 262 (586)
T ss_pred eEEEEEEEEEecccccceeEEEEecCCCcEEEEEeeccCh-HHHHHHHHHHHHHHHHhccCCCCCeeEEEeeeccccccc
Confidence 3457888889999999999999999999999999997653 333444555555
Q ss_pred -------------HHhhcC-CcCCCHHHHHHHHHHHHHHHHHHhcCCcccccCCCCCceEEcCC--ceEEEeccccchhc
Q psy6828 95 -------------DIMENE-DVKLDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLVDSR--WVVKLADFGLTEFK 158 (392)
Q Consensus 95 -------------~~l~~~-~~~l~~~~~~~i~~qi~~~l~ylH~~~iiiHrDlKp~NIll~~~--~~~kl~DFGla~~~ 158 (392)
+++++. -..|+...++.++.||+.||.+||+.+| ||.||||+||||.+. ..+||+|||.|.+.
T Consensus 263 lciVfELL~~NLYellK~n~f~Glsl~~ir~~~~Qil~~L~~L~~l~I-IHcDLKPENILL~~~~r~~vKVIDFGSSc~~ 341 (586)
T KOG0667|consen 263 LCIVFELLSTNLYELLKNNKFRGLSLPLVRKFAQQILTALLFLHELGI-IHCDLKPENILLKDPKRSRIKVIDFGSSCFE 341 (586)
T ss_pred eeeeehhhhhhHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCe-eeccCChhheeeccCCcCceeEEeccccccc
Confidence 555533 2258999999999999999999999999 999999999999754 46999999999876
Q ss_pred ccccc--------------------ccccccceeeeeee
Q psy6828 159 RDAEY--------------------TGTDQHSFLQHTYH 177 (392)
Q Consensus 159 ~~~~~--------------------~~~d~~s~g~~~~~ 177 (392)
..... +..|+|||||++.|
T Consensus 342 ~q~vytYiQSRfYRAPEVILGlpY~~~IDmWSLGCIlAE 380 (586)
T KOG0667|consen 342 SQRVYTYIQSRFYRAPEVILGLPYDTAIDMWSLGCILAE 380 (586)
T ss_pred CCcceeeeeccccccchhhccCCCCCccceeehhhhHHh
Confidence 55433 23499999999999
No 34
>KOG0580|consensus
Probab=99.89 E-value=4e-24 Score=184.34 Aligned_cols=113 Identities=21% Similarity=0.337 Sum_probs=97.6
Q ss_pred eeccCCCCCcceeEEEEEEEeecCcEEEEEEcCCCCh---hHHHHHHHHHHH----------------------------
Q psy6828 46 SLSSNPDSDFRYSAIFTPIGIYKGRIFAIKRIPKKSV---DITRAMKKELKI---------------------------- 94 (392)
Q Consensus 46 ~~~~~~lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~~---~~~~~~~~E~~~---------------------------- 94 (392)
+...++||+|-||.||+|+.+.++..||+|++.+..+ +....+.+|++|
T Consensus 24 feigr~LgkgkFG~vYlarekks~~IvalKVlfKsqi~~~~v~~qlrREiEIqs~L~hpnilrlY~~fhd~~riyLilEy 103 (281)
T KOG0580|consen 24 FEIGRPLGKGKFGNVYLAREKKSLFIVALKVLFKSQILKTQVEHQLRREIEIQSHLRHPNILRLYGYFHDSKRIYLILEY 103 (281)
T ss_pred ccccccccCCccccEeEeeeccCCcEEEEeeeeHHHHHHhcchhhhhheeEeecccCCccHHhhhhheeccceeEEEEEe
Confidence 4558999999999999999999999999999988765 233467778777
Q ss_pred --------HHhhcCCcCCCHHHHHHHHHHHHHHHHHHhcCCcccccCCCCCceEEcCCceEEEeccccchhcc
Q psy6828 95 --------DIMENEDVKLDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLVDSRWVVKLADFGLTEFKR 159 (392)
Q Consensus 95 --------~~l~~~~~~l~~~~~~~i~~qi~~~l~ylH~~~iiiHrDlKp~NIll~~~~~~kl~DFGla~~~~ 159 (392)
++-.....++++..+..+++|++.||.|+|.+++ |||||||+|+|++.++.+|++|||.+....
T Consensus 104 a~~gel~k~L~~~~~~~f~e~~~a~Yi~q~A~Al~y~h~k~V-IhRdiKpenlLlg~~~~lkiAdfGwsV~~p 175 (281)
T KOG0580|consen 104 APRGELYKDLQEGRMKRFDEQRAATYIKQLANALLYCHLKRV-IHRDIKPENLLLGSAGELKIADFGWSVHAP 175 (281)
T ss_pred cCCchHHHHHHhcccccccccchhHHHHHHHHHHHHhccCCc-ccCCCCHHHhccCCCCCeeccCCCceeecC
Confidence 2222344479999999999999999999999999 999999999999999999999999987654
No 35
>KOG0197|consensus
Probab=99.88 E-value=1.1e-22 Score=194.12 Aligned_cols=153 Identities=29% Similarity=0.363 Sum_probs=120.2
Q ss_pred cCCCCCcceeEEEEEEEeecCcEEEEEEcCCCChhHHHHHHHHHHH----------------------------------
Q psy6828 49 SNPDSDFRYSAIFTPIGIYKGRIFAIKRIPKKSVDITRAMKKELKI---------------------------------- 94 (392)
Q Consensus 49 ~~~lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~~~~~~~~~~E~~~---------------------------------- 94 (392)
.+.||+|.||+||+|... ....||+|.+....+. .+.|.+|+++
T Consensus 211 ~~~LG~G~FG~V~~g~~~-~~~~vavk~ik~~~m~-~~~f~~Ea~iMk~L~H~~lV~l~gV~~~~~piyIVtE~m~~GsL 288 (468)
T KOG0197|consen 211 IRELGSGQFGEVWLGKWN-GSTKVAVKTIKEGSMS-PEAFLREAQIMKKLRHEKLVKLYGVCTKQEPIYIVTEYMPKGSL 288 (468)
T ss_pred HHHhcCCccceEEEEEEc-CCCcccceEEeccccC-hhHHHHHHHHHHhCcccCeEEEEEEEecCCceEEEEEecccCcH
Confidence 678999999999999633 2348999999776543 3567788888
Q ss_pred -HHhhc-CCcCCCHHHHHHHHHHHHHHHHHHhcCCcccccCCCCCceEEcCCceEEEeccccchhccccccc--------
Q psy6828 95 -DIMEN-EDVKLDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLVDSRWVVKLADFGLTEFKRDAEYT-------- 164 (392)
Q Consensus 95 -~~l~~-~~~~l~~~~~~~i~~qi~~~l~ylH~~~iiiHrDlKp~NIll~~~~~~kl~DFGla~~~~~~~~~-------- 164 (392)
+|++. ....++..+...++.|||+|+.||+++++ |||||...|||++++..+||+|||+|+...++.++
T Consensus 289 l~yLr~~~~~~l~~~~Ll~~a~qIaeGM~YLes~~~-IHRDLAARNiLV~~~~~vKIsDFGLAr~~~d~~Y~~~~~~kfP 367 (468)
T KOG0197|consen 289 LDYLRTREGGLLNLPQLLDFAAQIAEGMAYLESKNY-IHRDLAARNILVDEDLVVKISDFGLARLIGDDEYTASEGGKFP 367 (468)
T ss_pred HHHhhhcCCCccchHHHHHHHHHHHHHHHHHHhCCc-cchhhhhhheeeccCceEEEcccccccccCCCceeecCCCCCC
Confidence 77775 44479999999999999999999999999 99999999999999999999999999965544432
Q ss_pred ----------------cccccceeeeeeec---cCCCCcccccccccchhhhccCCHHHHHHhhcCCCcccc
Q psy6828 165 ----------------GTDQHSFLQHTYHV---NRAGSTESLHCKCDEALLFEMLPRSVAEQLRRGTSVEAE 217 (392)
Q Consensus 165 ----------------~~d~~s~g~~~~~~---~~~~~~~~~d~~~~~~lL~~~lp~~v~~~l~~~~~~~~~ 217 (392)
.+||||||+++||. .+.++.. +-..++.+.+.++..++.+
T Consensus 368 IkWtAPEa~~~~~FS~kSDVWSFGVlL~E~fT~G~~py~~-------------msn~ev~~~le~GyRlp~P 426 (468)
T KOG0197|consen 368 IKWTAPEALNYGKFSSKSDVWSFGVLLWELFTYGRVPYPG-------------MSNEEVLELLERGYRLPRP 426 (468)
T ss_pred ceecCHHHHhhCCcccccceeehhhhHHHHhccCCCCCCC-------------CCHHHHHHHHhccCcCCCC
Confidence 33999999999992 2222222 4455677777776555443
No 36
>KOG3618|consensus
Probab=99.87 E-value=7.2e-23 Score=199.33 Aligned_cols=175 Identities=34% Similarity=0.499 Sum_probs=145.6
Q ss_pred cccchhhhccCCHHHHHHhhcCCCccccccCceEEEeecccchhhhhccC--ChhhHHHhHHHHHHHHHHhhhhcC---e
Q psy6828 190 KCDEALLFEMLPRSVAEQLRRGTSVEAESFDSVTIYFSDIVGFTAMSAES--TPLQVVDFLNDLYTCFDSIVGNYD---V 264 (392)
Q Consensus 190 ~~~~~lL~~~lp~~v~~~l~~~~~~~~~~~~~vtvlf~DI~~ft~l~~~~--~p~~l~~~Ln~~~~~~~~~v~~~~---g 264 (392)
.+...+|.+++|.++++.++.... ..+.+.++.++|+.|++|.++.++. .-.|..+.||++...||+...+-+ .
T Consensus 1053 dQADwLL~NiIP~HvaE~LK~~~k-YSeNH~~~gviFASIvNfnemYeEnyeGGkEflRVLNElIGDFDELLsrPdf~~i 1131 (1318)
T KOG3618|consen 1053 DQADWLLRNIIPYHVAEQLKVSQK-YSENHDSGGVIFASIVNFNEMYEENYEGGKEFLRVLNELIGDFDELLSRPDFSSI 1131 (1318)
T ss_pred HHHHHHHhccchHHHHHHhhcccc-ccccCccceEEEEEeccHHHHHHHhhhchHHHHHHHHHHhccHHHHhccccchhh
Confidence 456789999999999999987654 4566688999999999999998775 678999999999999999998764 5
Q ss_pred EEEeeeCceeeeccCCCcCCCCccccccccccceeeccceeEEEeCCCCCCChhhHHHHHHHHHHHHHHHHHhcccCCCC
Q psy6828 265 YKVETIGDAYMVVSGLPIRNGEQHAVGNYDVYKVETIGDAYMVVSGLPIRNGEQHAGEIASMSLDLLEAVKRFTVRHRPH 344 (392)
Q Consensus 265 ~~~~~~Gd~~~a~~g~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~g~~~~~~~~~a~~a~~~a~~~~~~~~~~~~~~~~~ 344 (392)
+++|+||-+|||+.|+...... | -.++.+|-...+++|++|++.+..+|.+- .+
T Consensus 1132 EKIKTIG~tyMAASGLnp~~~~----------------~---------~~hp~EHl~~l~eFa~amq~Vvd~FN~dl-L~ 1185 (1318)
T KOG3618|consen 1132 EKIKTIGATYMAASGLNPAQAQ----------------D---------GSHPQEHLQILFEFAKAMQRVVDDFNNDL-LW 1185 (1318)
T ss_pred HHHhhhhHHHHHhcCCChHHcc----------------C---------CCChHHHHHHHHHHHHHHHHHHHHhhhhh-hh
Confidence 6777777777777776432110 0 01345799999999999999999998543 45
Q ss_pred CCceEEEEeeccceeEeeeccCCceeeeecchHHHHHhhhhcCCCCC
Q psy6828 345 DDLKLRIGIHSGPVCAGVVGLKMPRYCLFGDTVNTASRMESTGEDVV 391 (392)
Q Consensus 345 ~~~~~~iGi~~G~v~~g~iG~~~~~y~~~G~~Vn~AsRle~~~~~g~ 391 (392)
.++.+|||.|.|+|.+|+||++|--||+||||||+||||.+++.+.+
T Consensus 1186 Fnf~lrvG~NiGpvTAGVIGTtKLyYDIWGDtVNiASRMdsTGv~nR 1232 (1318)
T KOG3618|consen 1186 FNFKLRVGFNIGPVTAGVIGTTKLYYDIWGDTVNIASRMDSTGVENR 1232 (1318)
T ss_pred eeeeEEeeccccCccccccccceeeehhhcchhhhhhhccccCCcce
Confidence 67999999999999999999999999999999999999999998763
No 37
>KOG0664|consensus
Probab=99.87 E-value=9.6e-23 Score=178.93 Aligned_cols=128 Identities=23% Similarity=0.385 Sum_probs=104.8
Q ss_pred cCCCCCcceeEEEEEEEeecCcEEEEEEcCCCC--hhHHHHHHHHHHH-------------------------------H
Q psy6828 49 SNPDSDFRYSAIFTPIGIYKGRIFAIKRIPKKS--VDITRAMKKELKI-------------------------------D 95 (392)
Q Consensus 49 ~~~lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~--~~~~~~~~~E~~~-------------------------------~ 95 (392)
.++||-|+||+||...+..+|+.||+|++..-. +...+++.+|+.. +
T Consensus 58 DRPIGYGAFGVVWsVTDPRdgrrvalkK~pnvfq~L~s~krvFre~kmLcfFkHdNVLSaLDILQPph~dfFqEiYV~TE 137 (449)
T KOG0664|consen 58 DRPIGYGAFGVVWSVTDPRSGKRVALKKMPNVFQNLASCKRVFREIKMLSSFRHDNVLSLLDILQPANPSFFQELYVLTE 137 (449)
T ss_pred CCcccccceeEEEeccCCCCccchhHhhcchHHHHHHHHHHHHHHHHHHHhhccccHHHHHHhcCCCCchHHHHHHHHHH
Confidence 689999999999999999999999999996532 3445667777666 2
Q ss_pred Hhhc-------CCcCCCHHHHHHHHHHHHHHHHHHhcCCcccccCCCCCceEEcCCceEEEeccccchhccccccc----
Q psy6828 96 IMEN-------EDVKLDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLVDSRWVVKLADFGLTEFKRDAEYT---- 164 (392)
Q Consensus 96 ~l~~-------~~~~l~~~~~~~i~~qi~~~l~ylH~~~iiiHrDlKp~NIll~~~~~~kl~DFGla~~~~~~~~~---- 164 (392)
+++. ....++...+.-+++||+.||+|||+.+| +||||||.|+|++++..+||||||+++....+...
T Consensus 138 LmQSDLHKIIVSPQ~Ls~DHvKVFlYQILRGLKYLHsA~I-LHRDIKPGNLLVNSNCvLKICDFGLARvee~d~~~hMTq 216 (449)
T KOG0664|consen 138 LMQSDLHKIIVSPQALTPDHVKVFVYQILRGLKYLHTANI-LHRDIKPGNLLVNSNCILKICDFGLARTWDQRDRLNMTH 216 (449)
T ss_pred HHHhhhhheeccCCCCCcchhhhhHHHHHhhhHHHhhcch-hhccCCCccEEeccCceEEecccccccccchhhhhhhHH
Confidence 2222 12258889999999999999999999999 99999999999999999999999999976544321
Q ss_pred ---------------------cccccceeeeeee
Q psy6828 165 ---------------------GTDQHSFLQHTYH 177 (392)
Q Consensus 165 ---------------------~~d~~s~g~~~~~ 177 (392)
..|+||.|+++-|
T Consensus 217 EVVTQYYRAPEiLMGaRhYs~AvDiWSVGCIFaE 250 (449)
T KOG0664|consen 217 EVVTQYYRAPELLMGARRYTGAVDIWSVGCIFAE 250 (449)
T ss_pred HHHHHHhccHHHhhcchhhcCccceehhhHHHHH
Confidence 1288999888776
No 38
>KOG0198|consensus
Probab=99.87 E-value=1.2e-21 Score=181.47 Aligned_cols=153 Identities=20% Similarity=0.317 Sum_probs=114.3
Q ss_pred ccCCCCCcceeEEEEEEEeecCcEEEEEEcCCCChhHHHHHHHHHHH---------------------------------
Q psy6828 48 SSNPDSDFRYSAIFTPIGIYKGRIFAIKRIPKKSVDITRAMKKELKI--------------------------------- 94 (392)
Q Consensus 48 ~~~~lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~~~~~~~~~~E~~~--------------------------------- 94 (392)
..+.+|+|+||.||++.+..+|+..|||.+........+.+.+|+.+
T Consensus 21 ~~~~lG~Gs~G~V~l~~~~~~g~~~AvK~v~~~~~~~~~~l~~Ei~iL~~l~~p~IV~~~G~~~~~~~~~~~i~mEy~~~ 100 (313)
T KOG0198|consen 21 KGKLLGRGSFGSVYLATNKKTGELMAVKSVELEDSPTSESLEREIRILSRLNHPNIVQYYGSSSSRENDEYNIFMEYAPG 100 (313)
T ss_pred hhccccCccceEEEEEEecCCCcceeeeeeecccchhHHHHHHHHHHHHhCCCCCEEeeCCccccccCeeeEeeeeccCC
Confidence 35679999999999999999999999999976643234556777776
Q ss_pred ----HHhhcCCcCCCHHHHHHHHHHHHHHHHHHhcCCcccccCCCCCceEEcC-CceEEEeccccchhccc-cccccccc
Q psy6828 95 ----DIMENEDVKLDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLVDS-RWVVKLADFGLTEFKRD-AEYTGTDQ 168 (392)
Q Consensus 95 ----~~l~~~~~~l~~~~~~~i~~qi~~~l~ylH~~~iiiHrDlKp~NIll~~-~~~~kl~DFGla~~~~~-~~~~~~d~ 168 (392)
+++.+....|++..++.+.+||++||.|||++|+ +||||||+|||++. ++.+||+|||+++.... ......+.
T Consensus 101 GsL~~~~~~~g~~l~E~~v~~ytr~iL~GL~ylHs~g~-vH~DiK~~NiLl~~~~~~~KlaDFG~a~~~~~~~~~~~~~~ 179 (313)
T KOG0198|consen 101 GSLSDLIKRYGGKLPEPLVRRYTRQILEGLAYLHSKGI-VHCDIKPANILLDPSNGDVKLADFGLAKKLESKGTKSDSEL 179 (313)
T ss_pred CcHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHhCCE-eccCcccceEEEeCCCCeEEeccCccccccccccccccccc
Confidence 3333333369999999999999999999999999 99999999999999 79999999999987664 11112233
Q ss_pred cceeeeeeeccCCCC---cc--cccccccchhhhccCC
Q psy6828 169 HSFLQHTYHVNRAGS---TE--SLHCKCDEALLFEMLP 201 (392)
Q Consensus 169 ~s~g~~~~~~~~~~~---~~--~~d~~~~~~lL~~~lp 201 (392)
...|.+.|++|+.-. .. ..|.|+.++.+-.|+.
T Consensus 180 ~~~Gtp~~maPEvi~~g~~~~~~sDiWSlGCtVvEM~T 217 (313)
T KOG0198|consen 180 SVQGTPNYMAPEVIRNGEVARRESDIWSLGCTVVEMLT 217 (313)
T ss_pred cccCCccccCchhhcCCCcCCccchhhhcCCEEEeccC
Confidence 345666666665222 12 5566666666666654
No 39
>cd05571 STKc_PKB Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. It is activated downstream of PI3K and plays important roles in diverse cellular functions including cell survival, growth, proliferation, angiogenesis, motility, and migration. PKB also has a central role in a variety of human cancers, having be
Probab=99.86 E-value=5.1e-22 Score=188.77 Aligned_cols=126 Identities=17% Similarity=0.204 Sum_probs=100.4
Q ss_pred CCCCcceeEEEEEEEeecCcEEEEEEcCCCCh---hHHHHHHHHHHH--------------------------HHhhc--
Q psy6828 51 PDSDFRYSAIFTPIGIYKGRIFAIKRIPKKSV---DITRAMKKELKI--------------------------DIMEN-- 99 (392)
Q Consensus 51 ~lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~~---~~~~~~~~E~~~--------------------------~~l~~-- 99 (392)
.||+|+||.||++.+..+|+.||+|++.+... .....+.+|+.+ +++..
T Consensus 2 ~lG~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~i~~~~~~~~~~~~~~lv~e~~~~~~ 81 (323)
T cd05571 2 LLGKGTFGKVILVREKATGKYYAMKILKKEVIIAKDEVAHTLTESRVLQNTRHPFLTALKYSFQTHDRLCFVMEYANGGE 81 (323)
T ss_pred eeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhCCCCCCCCEEEEEEcCCEEEEEEeCCCCCc
Confidence 58999999999999999999999999975432 233456666665 22221
Q ss_pred ------CCcCCCHHHHHHHHHHHHHHHHHHhcCCcccccCCCCCceEEcCCceEEEeccccchhccccc-----------
Q psy6828 100 ------EDVKLDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLVDSRWVVKLADFGLTEFKRDAE----------- 162 (392)
Q Consensus 100 ------~~~~l~~~~~~~i~~qi~~~l~ylH~~~iiiHrDlKp~NIll~~~~~~kl~DFGla~~~~~~~----------- 162 (392)
....+++..+..++.||+.||.|||++++ +||||||+|||++.++.+||+|||+++......
T Consensus 82 L~~~l~~~~~~~~~~~~~~~~qi~~~L~~lH~~~i-vHrDlkp~NIll~~~~~~kl~DfG~a~~~~~~~~~~~~~~gt~~ 160 (323)
T cd05571 82 LFFHLSRERVFSEDRARFYGAEIVSALGYLHSCDV-VYRDLKLENLMLDKDGHIKITDFGLCKEGISDGATMKTFCGTPE 160 (323)
T ss_pred HHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHhCCe-EeCCCCHHHEEECCCCCEEEeeCCCCcccccCCCcccceecCcc
Confidence 12358999999999999999999999999 999999999999999999999999987421110
Q ss_pred ------------cccccccceeeeeee
Q psy6828 163 ------------YTGTDQHSFLQHTYH 177 (392)
Q Consensus 163 ------------~~~~d~~s~g~~~~~ 177 (392)
....|+||+|+++|+
T Consensus 161 y~aPE~~~~~~~~~~~DiwSlG~il~e 187 (323)
T cd05571 161 YLAPEVLEDNDYGRAVDWWGLGVVMYE 187 (323)
T ss_pred ccChhhhcCCCCCccccCcccchhhhh
Confidence 113499999999999
No 40
>KOG2345|consensus
Probab=99.86 E-value=5.7e-22 Score=171.89 Aligned_cols=114 Identities=18% Similarity=0.212 Sum_probs=100.7
Q ss_pred ceeeeccCCCCCcceeEEEEEEEeecCcEEEEEEcCCCChhHHHHHHHHHHH----------------------------
Q psy6828 43 SQVSLSSNPDSDFRYSAIFTPIGIYKGRIFAIKRIPKKSVDITRAMKKELKI---------------------------- 94 (392)
Q Consensus 43 ~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~~~~~~~~~~E~~~---------------------------- 94 (392)
..+|...+.+|+|||+.||++.+..+++.||+|++...+.+..+..++|++.
T Consensus 20 ~~Ryri~~~LgeGGfsfv~LV~~~s~~~~YAlKkI~c~~~~~~e~~~rEid~~rkf~s~~vl~l~dh~l~~~~D~~~~~y 99 (302)
T KOG2345|consen 20 NKRYRIQRLLGEGGFSFVDLVKGLSTGHLYALKKILCHSQEDIEEALREIDNHRKFNSPNVLRLVDHQLREEKDGKHEAY 99 (302)
T ss_pred CceEEEeeeecCCCceeeeeecccCcccchhhheeeccchHHHHHHHHHHHHHHhhCCcchHHHHHHHHHhhccCceeEE
Confidence 4789999999999999999999999999999999988877778888888887
Q ss_pred ---------------HHhhcCCcCCCHHHHHHHHHHHHHHHHHHhcCC--cccccCCCCCceEEcCCceEEEeccccchh
Q psy6828 95 ---------------DIMENEDVKLDNMFIASLVADILRGMLYLHDSA--LRYHGNLKASNCLVDSRWVVKLADFGLTEF 157 (392)
Q Consensus 95 ---------------~~l~~~~~~l~~~~~~~i~~qi~~~l~ylH~~~--iiiHrDlKp~NIll~~~~~~kl~DFGla~~ 157 (392)
+.++.++..+++.++..|+.++++||++||+.. . .||||||.|||+.+.+.+++.|||.+..
T Consensus 100 ll~Pyy~~Gsl~d~i~~~k~kg~~~sE~~iL~if~gic~gL~~lH~~~~~y-AH~DiKP~NILls~~~~~vl~D~GS~~~ 178 (302)
T KOG2345|consen 100 LLLPYYKRGSLLDEIERLKIKGNFVSEAQILWIFLGICRGLEALHEKEPPY-AHRDIKPANILLSDSGLPVLMDLGSATQ 178 (302)
T ss_pred EEeehhccccHHHHHHHHhhcCCccCHHHHHHHHHHHHHHHHHHhccCCcc-cccCCCcceeEecCCCceEEEeccCccc
Confidence 222223336999999999999999999999987 6 9999999999999999999999999864
No 41
>cd07869 STKc_PFTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-1 kinase. Serine/Threonine Kinases (STKs), PFTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-1 is widely expressed except in the spleen and thymus. It is highly expressed in the brain, heart, pancreas, testis, and ovary, and is localized in the cytoplasm. It is regulated by cyclin D3 an
Probab=99.86 E-value=2.7e-22 Score=188.87 Aligned_cols=131 Identities=21% Similarity=0.265 Sum_probs=104.3
Q ss_pred eeccCCCCCcceeEEEEEEEeecCcEEEEEEcCCCCh-hHHHHHHHHHHH------------------------------
Q psy6828 46 SLSSNPDSDFRYSAIFTPIGIYKGRIFAIKRIPKKSV-DITRAMKKELKI------------------------------ 94 (392)
Q Consensus 46 ~~~~~~lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~~-~~~~~~~~E~~~------------------------------ 94 (392)
|...+.||+|+||.||+|.+..+++.||||++..... .....+.+|+.+
T Consensus 7 y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~ 86 (303)
T cd07869 7 YEKLEKLGEGSYATVYKGKSKVNGKLVALKVIRLQEEEGTPFTAIREASLLKGLKHANIVLLHDIIHTKETLTLVFEYVH 86 (303)
T ss_pred ceEeeeEEecCCEEEEEEEECCCCCEEEEEEeccccccccchhHHHHHHHHhhCCCCCcCeEEEEEecCCeEEEEEECCC
Confidence 5556789999999999999999999999999975432 222345566665
Q ss_pred ----HHhhcCCcCCCHHHHHHHHHHHHHHHHHHhcCCcccccCCCCCceEEcCCceEEEeccccchhccccc--------
Q psy6828 95 ----DIMENEDVKLDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLVDSRWVVKLADFGLTEFKRDAE-------- 162 (392)
Q Consensus 95 ----~~l~~~~~~l~~~~~~~i~~qi~~~l~ylH~~~iiiHrDlKp~NIll~~~~~~kl~DFGla~~~~~~~-------- 162 (392)
+++......+++..+..++.|++.||.|||++++ +||||||+|||++.++.+||+|||+++......
T Consensus 87 ~~l~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~i-vH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~ 165 (303)
T cd07869 87 TDLCQYMDKHPGGLHPENVKLFLFQLLRGLSYIHQRYI-LHRDLKPQNLLISDTGELKLADFGLARAKSVPSHTYSNEVV 165 (303)
T ss_pred cCHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHCCe-ecCCCCHHHEEECCCCCEEECCCCcceeccCCCccCCCCcc
Confidence 3344444468999999999999999999999999 999999999999999999999999986422100
Q ss_pred ----------------cccccccceeeeeee
Q psy6828 163 ----------------YTGTDQHSFLQHTYH 177 (392)
Q Consensus 163 ----------------~~~~d~~s~g~~~~~ 177 (392)
....|+||+|+++|+
T Consensus 166 ~~~y~aPE~~~~~~~~~~~~DiwslG~il~~ 196 (303)
T cd07869 166 TLWYRPPDVLLGSTEYSTCLDMWGVGCIFVE 196 (303)
T ss_pred cCCCCChHHHcCCCCCCcHHHHHHHHHHHHH
Confidence 112399999999998
No 42
>KOG0578|consensus
Probab=99.86 E-value=7.3e-22 Score=189.14 Aligned_cols=155 Identities=17% Similarity=0.226 Sum_probs=120.0
Q ss_pred cceeeeccCCCCCcceeEEEEEEEeecCcEEEEEEcCCCChhHHHHHHHHHHH--------------------------H
Q psy6828 42 TSQVSLSSNPDSDFRYSAIFTPIGIYKGRIFAIKRIPKKSVDITRAMKKELKI--------------------------D 95 (392)
Q Consensus 42 ~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~~~~~~~~~~E~~~--------------------------~ 95 (392)
....|.....+|+|+-|.||.++...+++.||||++........+.+.+|+.+ +
T Consensus 271 P~~~y~~~~kigqgaSG~vy~A~~~~~~~~VaiK~m~l~~Q~~keLilnEi~Vm~~~~H~NiVnfl~Sylv~deLWVVME 350 (550)
T KOG0578|consen 271 PRSKYTDFKKIGQGATGGVYVARKISTKQEVAIKRMDLRKQPKKELLLNEILVMRDLHHPNIVNFLDSYLVGDELWVVME 350 (550)
T ss_pred hhhhhcchhhhccccccceeeeeeccCCceEEEEEEEeccCCchhhhHHHHHHHHhccchHHHHHHHHhcccceeEEEEe
Confidence 34567778899999999999999999999999999988877777778888887 5
Q ss_pred HhhcCCc-------CCCHHHHHHHHHHHHHHHHHHhcCCcccccCCCCCceEEcCCceEEEeccccchhccccccccccc
Q psy6828 96 IMENEDV-------KLDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLVDSRWVVKLADFGLTEFKRDAEYTGTDQ 168 (392)
Q Consensus 96 ~l~~~~~-------~l~~~~~~~i~~qi~~~l~ylH~~~iiiHrDlKp~NIll~~~~~~kl~DFGla~~~~~~~~~~~d~ 168 (392)
|++.+.+ .++|.++..++++++.||+|||.++| +|||||.+|||++.+|.+||+|||+|..+........
T Consensus 351 ym~ggsLTDvVt~~~~~E~qIA~Icre~l~aL~fLH~~gI-iHrDIKSDnILL~~~g~vKltDFGFcaqi~~~~~KR~-- 427 (550)
T KOG0578|consen 351 YMEGGSLTDVVTKTRMTEGQIAAICREILQGLKFLHARGI-IHRDIKSDNILLTMDGSVKLTDFGFCAQISEEQSKRS-- 427 (550)
T ss_pred ecCCCchhhhhhcccccHHHHHHHHHHHHHHHHHHHhcce-eeeccccceeEeccCCcEEEeeeeeeeccccccCccc--
Confidence 5555443 58999999999999999999999999 9999999999999999999999999998766553222
Q ss_pred cceeeeeeeccC----CCCcccccccccchhhhcc
Q psy6828 169 HSFLQHTYHVNR----AGSTESLHCKCDEALLFEM 199 (392)
Q Consensus 169 ~s~g~~~~~~~~----~~~~~~~d~~~~~~lL~~~ 199 (392)
..+|++.|++|| -.+..++|+|+++.+.-+|
T Consensus 428 TmVGTPYWMAPEVvtrk~YG~KVDIWSLGIMaIEM 462 (550)
T KOG0578|consen 428 TMVGTPYWMAPEVVTRKPYGPKVDIWSLGIMAIEM 462 (550)
T ss_pred cccCCCCccchhhhhhcccCccccchhhhhHHHHH
Confidence 123445454444 3334444555544443333
No 43
>cd05631 STKc_GRK4 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 4. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK4 has a limited tissue distribution. It is mainly found i
Probab=99.86 E-value=1.2e-21 Score=182.82 Aligned_cols=129 Identities=18% Similarity=0.175 Sum_probs=102.2
Q ss_pred ccCCCCCcceeEEEEEEEeecCcEEEEEEcCCCCh---hHHHHHHHHHHH------------------------------
Q psy6828 48 SSNPDSDFRYSAIFTPIGIYKGRIFAIKRIPKKSV---DITRAMKKELKI------------------------------ 94 (392)
Q Consensus 48 ~~~~lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~~---~~~~~~~~E~~~------------------------------ 94 (392)
..+.||+|+||.||++.+..+++.||+|.+.+... .....+.+|+.+
T Consensus 4 ~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~iv~~~~~~~~~~~~~lv~e~~~ 83 (285)
T cd05631 4 HYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKRILEKVNSRFVVSLAYAYETKDALCLVLTIMN 83 (285)
T ss_pred EEEEEecCCCEEEEEEEEecCCceEEEEEeeHhhhhhhhhHHHHHHHHHHHHhcCCCcEEEEEEEEccCCeEEEEEEecC
Confidence 34569999999999999999999999999876543 223356677776
Q ss_pred -----HHhh-cCCcCCCHHHHHHHHHHHHHHHHHHhcCCcccccCCCCCceEEcCCceEEEeccccchhccccc------
Q psy6828 95 -----DIME-NEDVKLDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLVDSRWVVKLADFGLTEFKRDAE------ 162 (392)
Q Consensus 95 -----~~l~-~~~~~l~~~~~~~i~~qi~~~l~ylH~~~iiiHrDlKp~NIll~~~~~~kl~DFGla~~~~~~~------ 162 (392)
+++. .....+++..+..++.|++.||.|||++++ +||||||+|||++.++.+||+|||++.......
T Consensus 84 ~g~L~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i-iH~dikp~Nill~~~~~~kl~Dfg~~~~~~~~~~~~~~~ 162 (285)
T cd05631 84 GGDLKFHIYNMGNPGFDEQRAIFYAAELCCGLEDLQRERI-VYRDLKPENILLDDRGHIRISDLGLAVQIPEGETVRGRV 162 (285)
T ss_pred CCcHHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHhCCE-EeCCCCHHHEEECCCCCEEEeeCCCcEEcCCCCeecCCC
Confidence 1221 122358999999999999999999999999 999999999999999999999999987542211
Q ss_pred ----------------cccccccceeeeeee
Q psy6828 163 ----------------YTGTDQHSFLQHTYH 177 (392)
Q Consensus 163 ----------------~~~~d~~s~g~~~~~ 177 (392)
....|+||+|+++|+
T Consensus 163 g~~~y~aPE~~~~~~~~~~~DvwslGvil~e 193 (285)
T cd05631 163 GTVGYMAPEVINNEKYTFSPDWWGLGCLIYE 193 (285)
T ss_pred CCCCccCHhhhcCCCCCcccCchhHHHHHHH
Confidence 112389999998888
No 44
>KOG0662|consensus
Probab=99.86 E-value=5.6e-22 Score=164.22 Aligned_cols=113 Identities=26% Similarity=0.360 Sum_probs=92.8
Q ss_pred eccCCCCCcceeEEEEEEEeecCcEEEEEEcCCCCh--hHHHH------HHHHHHH------------------------
Q psy6828 47 LSSNPDSDFRYSAIFTPIGIYKGRIFAIKRIPKKSV--DITRA------MKKELKI------------------------ 94 (392)
Q Consensus 47 ~~~~~lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~~--~~~~~------~~~E~~~------------------------ 94 (392)
...+.+|+|+||+||+++++.+++.||+|.++...- ..-.. +.+|+..
T Consensus 5 dkmekigegtygtvfkarn~~t~eivalkrvrlddddegvpssalreicllkelkhknivrl~dvlhsdkkltlvfe~cd 84 (292)
T KOG0662|consen 5 DKMEKIGEGTYGTVFKARNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLHDVLHSDKKLTLVFEFCD 84 (292)
T ss_pred HHHHhhcCCcceeeEecccCCccceEEEEEEeccCCCCCCcHHHHHHHHHHHHhhhcceeehhhhhccCceeEEeHHHhh
Confidence 345679999999999999999999999999864322 11122 3334433
Q ss_pred ----HHhhcCCcCCCHHHHHHHHHHHHHHHHHHhcCCcccccCCCCCceEEcCCceEEEeccccchhccc
Q psy6828 95 ----DIMENEDVKLDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLVDSRWVVKLADFGLTEFKRD 160 (392)
Q Consensus 95 ----~~l~~~~~~l~~~~~~~i~~qi~~~l~ylH~~~iiiHrDlKp~NIll~~~~~~kl~DFGla~~~~~ 160 (392)
.|+..-++.++.+.++.++.|++.||.|+|++++ +||||||.|+|++.+|.+|++|||+++...-
T Consensus 85 qdlkkyfdslng~~d~~~~rsfmlqllrgl~fchshnv-lhrdlkpqnllin~ngelkladfglarafgi 153 (292)
T KOG0662|consen 85 QDLKKYFDSLNGDLDPEIVRSFMLQLLRGLGFCHSHNV-LHRDLKPQNLLINRNGELKLADFGLARAFGI 153 (292)
T ss_pred HHHHHHHHhcCCcCCHHHHHHHHHHHHhhhhhhhhhhh-hhccCCcceEEeccCCcEEecccchhhhcCC
Confidence 4555556679999999999999999999999999 9999999999999999999999999997643
No 45
>KOG0588|consensus
Probab=99.85 E-value=4.3e-22 Score=193.36 Aligned_cols=130 Identities=24% Similarity=0.302 Sum_probs=108.9
Q ss_pred eeccCCCCCcceeEEEEEEEeecCcEEEEEEcCCCC-h--hHHHHHHHHHHH----------------------------
Q psy6828 46 SLSSNPDSDFRYSAIFTPIGIYKGRIFAIKRIPKKS-V--DITRAMKKELKI---------------------------- 94 (392)
Q Consensus 46 ~~~~~~lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~-~--~~~~~~~~E~~~---------------------------- 94 (392)
+..+..||+|+-|.|.+|++..||+..|||++.+.. . .....+.+|+.+
T Consensus 14 wkLgkTLG~Gstg~vrlakh~~TGqlaaiKii~k~~~~s~s~~~~IerEIviMkLi~HpnVl~LydVwe~~~~lylvlEy 93 (786)
T KOG0588|consen 14 WKLGKTLGKGSTGCVRLAKHAETGQLAAIKIIPKRSELSSSQPAGIEREIVIMKLIEHPNVLRLYDVWENKQHLYLVLEY 93 (786)
T ss_pred eeccccccCCCCceehhhhcccccceeEEEeeccccccccccccchhhhhHHHHHhcCCCeeeeeeeeccCceEEEEEEe
Confidence 345678999999999999999999999999998873 2 233456677776
Q ss_pred -------HHhhcCCcCCCHHHHHHHHHHHHHHHHHHhcCCcccccCCCCCceEEcCCceEEEeccccchhccccccc---
Q psy6828 95 -------DIMENEDVKLDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLVDSRWVVKLADFGLTEFKRDAEYT--- 164 (392)
Q Consensus 95 -------~~l~~~~~~l~~~~~~~i~~qi~~~l~ylH~~~iiiHrDlKp~NIll~~~~~~kl~DFGla~~~~~~~~~--- 164 (392)
+|+-.++ .+++.++..+++||+.|+.|||..++ +||||||+|+||+.++++||+|||+|....++...
T Consensus 94 v~gGELFdylv~kG-~l~e~eaa~ff~QIi~gv~yCH~~~i-cHRDLKpENlLLd~~~nIKIADFGMAsLe~~gklLeTS 171 (786)
T KOG0588|consen 94 VPGGELFDYLVRKG-PLPEREAAHFFRQILDGVSYCHAFNI-CHRDLKPENLLLDVKNNIKIADFGMASLEVPGKLLETS 171 (786)
T ss_pred cCCchhHHHHHhhC-CCCCHHHHHHHHHHHHHHHHHhhhcc-eeccCCchhhhhhcccCEeeeccceeecccCCcccccc
Confidence 4444443 79999999999999999999999999 99999999999999999999999999875544322
Q ss_pred --------------------cccccceeeeeee
Q psy6828 165 --------------------GTDQHSFLQHTYH 177 (392)
Q Consensus 165 --------------------~~d~~s~g~~~~~ 177 (392)
..||||+|+++|-
T Consensus 172 CGSPHYA~PEIV~G~pYdG~~sDVWSCGVILfA 204 (786)
T KOG0588|consen 172 CGSPHYAAPEIVSGRPYDGRPSDVWSCGVILFA 204 (786)
T ss_pred CCCcccCCchhhcCCCCCCCccccchhHHHHHH
Confidence 2399999999998
No 46
>KOG0192|consensus
Probab=99.85 E-value=1.7e-21 Score=185.38 Aligned_cols=109 Identities=28% Similarity=0.429 Sum_probs=92.5
Q ss_pred cCCCCCcceeEEEEEEEeecCcE-EEEEEcCCCCh--hHHHHHHHHHHH-------------------------------
Q psy6828 49 SNPDSDFRYSAIFTPIGIYKGRI-FAIKRIPKKSV--DITRAMKKELKI------------------------------- 94 (392)
Q Consensus 49 ~~~lg~G~~g~V~~~~~~~~~~~-vAiK~~~~~~~--~~~~~~~~E~~~------------------------------- 94 (392)
...+|+|+||+||++. +.|+. ||||.+..... ...+.|.+|+.+
T Consensus 46 ~~~iG~G~~g~V~~~~--~~g~~~vavK~~~~~~~~~~~~~~f~~E~~il~~l~HpNIV~f~G~~~~~~~~~~iVtEy~~ 123 (362)
T KOG0192|consen 46 EEVLGSGSFGTVYKGK--WRGTDVVAVKIISDPDFDDESRKAFRREASLLSRLRHPNIVQFYGACTSPPGSLCIVTEYMP 123 (362)
T ss_pred hhhcccCCceeEEEEE--eCCceeEEEEEecchhcChHHHHHHHHHHHHHHhCCCCCeeeEEEEEcCCCCceEEEEEeCC
Confidence 3449999999999996 44777 99999987543 225689999988
Q ss_pred -----HHhhc-CCcCCCHHHHHHHHHHHHHHHHHHhcCC-cccccCCCCCceEEcCCc-eEEEeccccchhccc
Q psy6828 95 -----DIMEN-EDVKLDNMFIASLVADILRGMLYLHDSA-LRYHGNLKASNCLVDSRW-VVKLADFGLTEFKRD 160 (392)
Q Consensus 95 -----~~l~~-~~~~l~~~~~~~i~~qi~~~l~ylH~~~-iiiHrDlKp~NIll~~~~-~~kl~DFGla~~~~~ 160 (392)
+++.. ....++...+..++.||+.||.|||+++ | |||||||+|||++.++ ++||+|||+++....
T Consensus 124 ~GsL~~~l~~~~~~~l~~~~~l~~aldiArGm~YLH~~~~i-IHrDLK~~NiLv~~~~~~~KI~DFGlsr~~~~ 196 (362)
T KOG0192|consen 124 GGSLSVLLHKKRKRKLPLKVRLRIALDIARGMEYLHSEGPI-IHRDLKSDNILVDLKGKTLKIADFGLSREKVI 196 (362)
T ss_pred CCcHHHHHhhcccCCCCHHHHHHHHHHHHHHHHHHhcCCCe-eecccChhhEEEcCCCCEEEECCCccceeecc
Confidence 55544 3557999999999999999999999999 8 9999999999999998 999999999986553
No 47
>cd05628 STKc_NDR1 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 1. Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. NDR1 is highly expressed in thymus, mus
Probab=99.85 E-value=9.5e-22 Score=189.99 Aligned_cols=110 Identities=21% Similarity=0.250 Sum_probs=91.3
Q ss_pred eccCCCCCcceeEEEEEEEeecCcEEEEEEcCCCCh---hHHHHHHHHHHH-----------------------------
Q psy6828 47 LSSNPDSDFRYSAIFTPIGIYKGRIFAIKRIPKKSV---DITRAMKKELKI----------------------------- 94 (392)
Q Consensus 47 ~~~~~lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~~---~~~~~~~~E~~~----------------------------- 94 (392)
...+.||+|+||+||++.+..+++.||||++++... .....+.+|+.+
T Consensus 4 ~~~~~LG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~il~~~~~~~iv~~~~~~~~~~~~~lv~E~~ 83 (363)
T cd05628 4 ESLKVIGRGAFGEVRLVQKKDTGHVYAMKILRKADMLEKEQVGHIRAERDILVEADSLWVVKMFYSFQDKLNLYLIMEFL 83 (363)
T ss_pred eEeEEEEeCCCEEEEEEEECCCCCEEEEEEEEHHHHHHhhHHHHHHHHHHHHHhCCCCCcceEEEEEecCCeEEEEEcCC
Confidence 345679999999999999999999999999976432 233456666655
Q ss_pred ------HHhhcCCcCCCHHHHHHHHHHHHHHHHHHhcCCcccccCCCCCceEEcCCceEEEeccccchhc
Q psy6828 95 ------DIMENEDVKLDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLVDSRWVVKLADFGLTEFK 158 (392)
Q Consensus 95 ------~~l~~~~~~l~~~~~~~i~~qi~~~l~ylH~~~iiiHrDlKp~NIll~~~~~~kl~DFGla~~~ 158 (392)
+++.. ...+++.++..++.|++.||.|||++++ +||||||+|||++.++.+||+|||+++..
T Consensus 84 ~gg~L~~~l~~-~~~l~~~~~~~~~~qi~~aL~~lH~~gi-vHrDlKp~NILi~~~~~vkL~DFGla~~~ 151 (363)
T cd05628 84 PGGDMMTLLMK-KDTLTEEETQFYIAETVLAIDSIHQLGF-IHRDIKPDNLLLDSKGHVKLSDFGLCTGL 151 (363)
T ss_pred CCCcHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHhCCe-EecCCCHHHeEECCCCCEEEeeccCcccc
Confidence 22222 2368999999999999999999999999 99999999999999999999999998754
No 48
>cd05594 STKc_PKB_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B alpha. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, alpha (or Akt1) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-alpha is predominantly expressed in endothelial cells. It is critical for the regulation of angiogenesis and the maintenance of vascular integrity. It also plays a role in adipocyte differentiation. Mice deficien
Probab=99.85 E-value=4.3e-21 Score=182.53 Aligned_cols=126 Identities=18% Similarity=0.203 Sum_probs=99.5
Q ss_pred CCCCcceeEEEEEEEeecCcEEEEEEcCCCCh---hHHHHHHHHHHH--------------------------HHhhc--
Q psy6828 51 PDSDFRYSAIFTPIGIYKGRIFAIKRIPKKSV---DITRAMKKELKI--------------------------DIMEN-- 99 (392)
Q Consensus 51 ~lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~~---~~~~~~~~E~~~--------------------------~~l~~-- 99 (392)
.||+|+||.||++.+..+|+.||+|.+.+... .....+.+|+.+ +|+..
T Consensus 2 ~lG~G~~g~V~~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~e~~~l~~~~hp~i~~~~~~~~~~~~~~lv~E~~~~~~ 81 (325)
T cd05594 2 LLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHPFLTALKYSFQTHDRLCFVMEYANGGE 81 (325)
T ss_pred eeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCCceEEEEEcCCEEEEEEeCCCCCc
Confidence 58999999999999999999999999975422 233445566555 22221
Q ss_pred ------CCcCCCHHHHHHHHHHHHHHHHHHhc-CCcccccCCCCCceEEcCCceEEEeccccchhcccc-----------
Q psy6828 100 ------EDVKLDNMFIASLVADILRGMLYLHD-SALRYHGNLKASNCLVDSRWVVKLADFGLTEFKRDA----------- 161 (392)
Q Consensus 100 ------~~~~l~~~~~~~i~~qi~~~l~ylH~-~~iiiHrDlKp~NIll~~~~~~kl~DFGla~~~~~~----------- 161 (392)
....+++..+..++.|++.||.|||+ +++ +||||||+|||++.++.+||+|||+++.....
T Consensus 82 L~~~l~~~~~l~~~~~~~~~~qi~~aL~~lH~~~~i-vHrDikp~NIll~~~~~~kL~Dfg~~~~~~~~~~~~~~~~gt~ 160 (325)
T cd05594 82 LFFHLSRERVFSEDRARFYGAEIVSALDYLHSEKNV-VYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGATMKTFCGTP 160 (325)
T ss_pred HHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhcCCE-EecCCCCCeEEECCCCCEEEecCCCCeecCCCCcccccccCCc
Confidence 12368999999999999999999997 789 99999999999999999999999998642110
Q ss_pred ------------ccccccccceeeeeee
Q psy6828 162 ------------EYTGTDQHSFLQHTYH 177 (392)
Q Consensus 162 ------------~~~~~d~~s~g~~~~~ 177 (392)
.....|+||+|+++|+
T Consensus 161 ~y~aPE~~~~~~~~~~~DiwslG~il~e 188 (325)
T cd05594 161 EYLAPEVLEDNDYGRAVDWWGLGVVMYE 188 (325)
T ss_pred ccCCHHHHccCCCCCccccccccceeee
Confidence 0123499999999999
No 49
>KOG0193|consensus
Probab=99.85 E-value=1.4e-21 Score=188.27 Aligned_cols=107 Identities=22% Similarity=0.343 Sum_probs=90.6
Q ss_pred eccCCCCCcceeEEEEEEEeecCcEEEEEEcCCCCh--hHHHHHHHHHHH------------------------------
Q psy6828 47 LSSNPDSDFRYSAIFTPIGIYKGRIFAIKRIPKKSV--DITRAMKKELKI------------------------------ 94 (392)
Q Consensus 47 ~~~~~lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~~--~~~~~~~~E~~~------------------------------ 94 (392)
....+||+|+||+||+|.+. ..||||.++.... ...+.|.+|+..
T Consensus 395 ~l~~rIGsGsFGtV~Rg~wh---GdVAVK~Lnv~~pt~~qlqaFKnEVa~lkkTRH~NIlLFMG~~~~p~~AIiTqwCeG 471 (678)
T KOG0193|consen 395 LLGERIGSGSFGTVYRGRWH---GDVAVKLLNVDDPTPEQLQAFKNEVAVLKKTRHENILLFMGACMNPPLAIITQWCEG 471 (678)
T ss_pred hccceeccccccceeecccc---cceEEEEEecCCCCHHHHHHHHHHHHHHhhcchhhheeeehhhcCCceeeeehhccC
Confidence 44788999999999999754 3699999976554 577889999887
Q ss_pred ----HHhhcCCcCCCHHHHHHHHHHHHHHHHHHhcCCcccccCCCCCceEEcCCceEEEeccccchh
Q psy6828 95 ----DIMENEDVKLDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLVDSRWVVKLADFGLTEF 157 (392)
Q Consensus 95 ----~~l~~~~~~l~~~~~~~i~~qi~~~l~ylH~~~iiiHrDlKp~NIll~~~~~~kl~DFGla~~ 157 (392)
.++.-...+|+-.....|++||++|+.|||.++| ||||||..||++.+++++||+|||++..
T Consensus 472 sSLY~hlHv~etkfdm~~~idIAqQiaqGM~YLHAK~I-IHrDLKSnNIFl~~~~kVkIgDFGLatv 537 (678)
T KOG0193|consen 472 SSLYTHLHVQETKFDMNTTIDIAQQIAQGMDYLHAKNI-IHRDLKSNNIFLHEDLKVKIGDFGLATV 537 (678)
T ss_pred chhhhhccchhhhhhHHHHHHHHHHHHHhhhhhhhhhh-hhhhccccceEEccCCcEEEecccceee
Confidence 2222222368888899999999999999999999 9999999999999999999999999865
No 50
>cd05612 STKc_PRKX_like Catalytic domain of PRKX-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, PRKX-like kinases, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include human PRKX (X chromosome-encoded protein kinase), Drosophila DC2, and similar proteins. PRKX is present in many tissues including fetal and adult brain, kidney, and lung. The PRKX gene is located in the Xp22.3 subregion and has a homolog called PRKY on the Y chromosome. An abnormal interchange between PRKX aand PRKY leads to the sex reversal disorder of XX males and XY females. PRKX is implicated in granulocyt
Probab=99.85 E-value=1.4e-21 Score=183.02 Aligned_cols=129 Identities=19% Similarity=0.244 Sum_probs=104.3
Q ss_pred eccCCCCCcceeEEEEEEEeecCcEEEEEEcCCCCh---hHHHHHHHHHHH-----------------------------
Q psy6828 47 LSSNPDSDFRYSAIFTPIGIYKGRIFAIKRIPKKSV---DITRAMKKELKI----------------------------- 94 (392)
Q Consensus 47 ~~~~~lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~~---~~~~~~~~E~~~----------------------------- 94 (392)
...+.||+|+||.||++.+..+++.||+|.+..... ...+.+.+|+.+
T Consensus 4 ~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~~ 83 (291)
T cd05612 4 ERIKTVGTGTFGRVHLVRDRISEHYYALKVMAIPEVIRLKQEQHVHNEKRVLKEVSHPFIIRLFWTEHDQRFLYMLMEYV 83 (291)
T ss_pred eeeeeeecCCCeEEEEEEEcCCCCEEEEEEEEHHHHhhhHHHHHHHHHHHHHHhCCCCcHhhhHhhhccCCeEEEEEeCC
Confidence 345679999999999999999999999999965432 334556677766
Q ss_pred ------HHhhcCCcCCCHHHHHHHHHHHHHHHHHHhcCCcccccCCCCCceEEcCCceEEEeccccchhccccc------
Q psy6828 95 ------DIMENEDVKLDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLVDSRWVVKLADFGLTEFKRDAE------ 162 (392)
Q Consensus 95 ------~~l~~~~~~l~~~~~~~i~~qi~~~l~ylH~~~iiiHrDlKp~NIll~~~~~~kl~DFGla~~~~~~~------ 162 (392)
+++.+. ..+++..+..++.|++.||.|||++++ +||||||+|||++.++.+||+|||+++......
T Consensus 84 ~~~~L~~~~~~~-~~~~~~~~~~~~~qi~~~l~~lH~~~i-~H~dlkp~NIli~~~~~~kl~Dfg~~~~~~~~~~~~~gt 161 (291)
T cd05612 84 PGGELFSYLRNS-GRFSNSTGLFYASEIVCALEYLHSKEI-VYRDLKPENILLDKEGHIKLTDFGFAKKLRDRTWTLCGT 161 (291)
T ss_pred CCCCHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHHCCe-eecCCCHHHeEECCCCCEEEEecCcchhccCCcccccCC
Confidence 233222 258999999999999999999999999 999999999999999999999999987643321
Q ss_pred --------------cccccccceeeeeee
Q psy6828 163 --------------YTGTDQHSFLQHTYH 177 (392)
Q Consensus 163 --------------~~~~d~~s~g~~~~~ 177 (392)
....|+||+|+++|+
T Consensus 162 ~~y~aPE~~~~~~~~~~~DiwSlG~il~~ 190 (291)
T cd05612 162 PEYLAPEVIQSKGHNKAVDWWALGILIYE 190 (291)
T ss_pred hhhcCHHHHcCCCCCchhhHHHHHHHHHH
Confidence 123499999999998
No 51
>KOG4717|consensus
Probab=99.85 E-value=4.3e-22 Score=188.07 Aligned_cols=165 Identities=21% Similarity=0.270 Sum_probs=128.9
Q ss_pred cceeeeccCCCCCcceeEEEEEEEeecCcEEEEEEcCCCChh--HHHHHHHHHHH-------------------------
Q psy6828 42 TSQVSLSSNPDSDFRYSAIFTPIGIYKGRIFAIKRIPKKSVD--ITRAMKKELKI------------------------- 94 (392)
Q Consensus 42 ~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~~~--~~~~~~~E~~~------------------------- 94 (392)
+-.+|...+.||+|-|.+|.++++..+|+.||||++.+.++. .+..+.+|+..
T Consensus 16 IAGLYDLekTlG~GHFAVVKLArHVFTGekVAVKviDKTKlD~~st~hlfqEVRCMKLVQHpNiVRLYEViDTQTKlyLi 95 (864)
T KOG4717|consen 16 IAGLYDLEKTLGRGHFAVVKLARHVFTGEKVAVKVIDKTKLDTLSTGHLFQEVRCMKLVQHPNIVRLYEVIDTQTKLYLI 95 (864)
T ss_pred eeeeehhhhhhcCCceehhhhhhhhcccceeEEEEecccccchhhhhHHHHHHHHHHHhcCcCeeeeeehhcccceEEEE
Confidence 456677788999999999999999999999999999998874 34567788776
Q ss_pred ----------HHhhcCCcCCCHHHHHHHHHHHHHHHHHHhcCCcccccCCCCCceEEcCC-ceEEEeccccchhcccccc
Q psy6828 95 ----------DIMENEDVKLDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLVDSR-WVVKLADFGLTEFKRDAEY 163 (392)
Q Consensus 95 ----------~~l~~~~~~l~~~~~~~i~~qi~~~l~ylH~~~iiiHrDlKp~NIll~~~-~~~kl~DFGla~~~~~~~~ 163 (392)
+|+-.++..+.+..+.+|+.||+.|+.|+|+..+ +||||||+|+.+-+. |-+||.|||++-.+.....
T Consensus 96 LELGD~GDl~DyImKHe~Gl~E~La~kYF~QI~~AI~YCHqLHV-VHRDLKPENVVFFEKlGlVKLTDFGFSNkf~PG~k 174 (864)
T KOG4717|consen 96 LELGDGGDLFDYIMKHEEGLNEDLAKKYFAQIVHAISYCHQLHV-VHRDLKPENVVFFEKLGLVKLTDFGFSNKFQPGKK 174 (864)
T ss_pred EEecCCchHHHHHHhhhccccHHHHHHHHHHHHHHHHHHhhhhh-hcccCCcceeEEeeecCceEeeeccccccCCCcch
Confidence 5655566679999999999999999999999999 999999999988654 8899999999976554432
Q ss_pred cc-----------------------ccccceeeeeee--ccCCCCcc---------cccc---------cccchhhhccC
Q psy6828 164 TG-----------------------TDQHSFLQHTYH--VNRAGSTE---------SLHC---------KCDEALLFEML 200 (392)
Q Consensus 164 ~~-----------------------~d~~s~g~~~~~--~~~~~~~~---------~~d~---------~~~~~lL~~~l 200 (392)
.. .|+||+|+++|+ -.+.++.+ -+|| ...+.++..||
T Consensus 175 L~TsCGSLAYSAPEILLGDsYDAPAVDiWSLGVILyMLVCGq~PFqeANDSETLTmImDCKYtvPshvS~eCrdLI~sML 254 (864)
T KOG4717|consen 175 LTTSCGSLAYSAPEILLGDSYDAPAVDIWSLGVILYMLVCGQPPFQEANDSETLTMIMDCKYTVPSHVSKECRDLIQSML 254 (864)
T ss_pred hhcccchhhccCchhhhcCccCCcchhhhHHHHHHHHHHhCCCccccccchhhhhhhhcccccCchhhhHHHHHHHHHHH
Confidence 21 299999999999 22222222 1122 45677788887
Q ss_pred CHHHHHH
Q psy6828 201 PRSVAEQ 207 (392)
Q Consensus 201 p~~v~~~ 207 (392)
-++...+
T Consensus 255 vRdPkkR 261 (864)
T KOG4717|consen 255 VRDPKKR 261 (864)
T ss_pred hcCchhh
Confidence 6554443
No 52
>KOG0983|consensus
Probab=99.85 E-value=5.6e-21 Score=167.92 Aligned_cols=136 Identities=17% Similarity=0.261 Sum_probs=110.0
Q ss_pred cCCCCCcceeEEEEEEEeecCcEEEEEEcCCCCh-hHHHHHHHHHHH---------------------------------
Q psy6828 49 SNPDSDFRYSAIFTPIGIYKGRIFAIKRIPKKSV-DITRAMKKELKI--------------------------------- 94 (392)
Q Consensus 49 ~~~lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~~-~~~~~~~~E~~~--------------------------------- 94 (392)
...+|.|+.|+|++++.+.+|...|||.+.+..- +..++++..+.+
T Consensus 97 l~dlGsGtcG~V~k~~~rs~~~iiAVK~M~rt~Nkee~kRILmDldvv~~s~dcpyIV~c~GyFi~n~dV~IcMelMs~C 176 (391)
T KOG0983|consen 97 LGDLGSGTCGQVWKMRFRSTGHIIAVKQMRRTGNKEENKRILMDLDVVLKSHDCPYIVQCFGYFITNTDVFICMELMSTC 176 (391)
T ss_pred HHhhcCCCccceEEEEEcccceEEEEEeecccCCHHHHHHHHHhhhHHhhccCCCeeeeeeeEEeeCchHHHHHHHHHHH
Confidence 4568999999999999999999999999987643 556667776666
Q ss_pred --HHhhcCCcCCCHHHHHHHHHHHHHHHHHHhc-CCcccccCCCCCceEEcCCceEEEeccccchhccccccc-------
Q psy6828 95 --DIMENEDVKLDNMFIASLVADILRGMLYLHD-SALRYHGNLKASNCLVDSRWVVKLADFGLTEFKRDAEYT------- 164 (392)
Q Consensus 95 --~~l~~~~~~l~~~~~~~i~~qi~~~l~ylH~-~~iiiHrDlKp~NIll~~~~~~kl~DFGla~~~~~~~~~------- 164 (392)
.++++....++|.-+-.+..-+++||.||-+ +++ +|||+||+|||+|..|++|+||||++..+.+..-.
T Consensus 177 ~ekLlkrik~piPE~ilGk~tva~v~AL~YLKeKH~v-iHRDvKPSNILlDe~GniKlCDFGIsGrlvdSkAhtrsAGC~ 255 (391)
T KOG0983|consen 177 AEKLLKRIKGPIPERILGKMTVAIVKALYYLKEKHGV-IHRDVKPSNILLDERGNIKLCDFGISGRLVDSKAHTRSAGCA 255 (391)
T ss_pred HHHHHHHhcCCchHHhhhhhHHHHHHHHHHHHHhcce-eecccCccceEEccCCCEEeecccccceeecccccccccCCc
Confidence 4555566679999999999999999999996 466 99999999999999999999999999875432211
Q ss_pred ------------------cccccceeeeeee--ccCCCCcc
Q psy6828 165 ------------------GTDQHSFLQHTYH--VNRAGSTE 185 (392)
Q Consensus 165 ------------------~~d~~s~g~~~~~--~~~~~~~~ 185 (392)
..|+||||+.+|| +.++++..
T Consensus 256 ~YMaPERidp~~~~kYDiRaDVWSlGITlveLaTg~yPy~~ 296 (391)
T KOG0983|consen 256 AYMAPERIDPPDKPKYDIRADVWSLGITLVELATGQYPYKG 296 (391)
T ss_pred cccCccccCCCCCCccchhhhhhhhccchhhhhcccCCCCC
Confidence 1289999999998 45566544
No 53
>cd05598 STKc_LATS Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor. Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS was originally identified in Drosophila using a screen for genes whose inactivation led to overproliferation of cells. In tetrapods, there are two LATS isoforms, LATS1 and LATS2. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. LATS functions as a tumor suppressor and is implicated in cell cycle regulation.
Probab=99.85 E-value=4.5e-21 Score=186.09 Aligned_cols=109 Identities=18% Similarity=0.264 Sum_probs=90.5
Q ss_pred eeccCCCCCcceeEEEEEEEeecCcEEEEEEcCCCCh---hHHHHHHHHHHH----------------------------
Q psy6828 46 SLSSNPDSDFRYSAIFTPIGIYKGRIFAIKRIPKKSV---DITRAMKKELKI---------------------------- 94 (392)
Q Consensus 46 ~~~~~~lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~~---~~~~~~~~E~~~---------------------------- 94 (392)
|...+.||+|+||.||++.+..+++.||+|.+.+... ...+.+.+|+.+
T Consensus 3 y~~~~~lG~G~~g~V~~a~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~h~~iv~~~~~~~~~~~~~lv~E~ 82 (376)
T cd05598 3 FVKIKTIGIGAFGEVCLVRKVDTNALYAMKTLRKADVLMRNQAAHVKAERDILAEADNEWVVKLYYSFQDKDNLYFVMDY 82 (376)
T ss_pred ceEEEEEEeCCCeEEEEEEECCCCCEEEEEEEcHHHHHhhhhHHHHHHHHHHHHhCCCCCcceEEEEEEcCCEEEEEEeC
Confidence 4456789999999999999999999999999975432 233456667666
Q ss_pred -------HHhhcCCcCCCHHHHHHHHHHHHHHHHHHhcCCcccccCCCCCceEEcCCceEEEeccccch
Q psy6828 95 -------DIMENEDVKLDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLVDSRWVVKLADFGLTE 156 (392)
Q Consensus 95 -------~~l~~~~~~l~~~~~~~i~~qi~~~l~ylH~~~iiiHrDlKp~NIll~~~~~~kl~DFGla~ 156 (392)
+++... ..+++..+..++.||+.||.|||++++ +||||||+|||++.++.+||+|||++.
T Consensus 83 ~~~g~L~~~i~~~-~~~~~~~~~~~~~qi~~al~~lH~~~i-vHrDlkp~Nill~~~~~ikL~DFG~a~ 149 (376)
T cd05598 83 IPGGDMMSLLIRL-GIFEEDLARFYIAELTCAIESVHKMGF-IHRDIKPDNILIDRDGHIKLTDFGLCT 149 (376)
T ss_pred CCCCcHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHCCe-EeCCCCHHHEEECCCCCEEEEeCCCCc
Confidence 233222 258899999999999999999999999 999999999999999999999999974
No 54
>KOG4250|consensus
Probab=99.85 E-value=9.8e-22 Score=192.47 Aligned_cols=128 Identities=20% Similarity=0.304 Sum_probs=105.6
Q ss_pred cCCCCCcceeEEEEEEEeecCcEEEEEEcCCCC-hhHHHHHHHHHHH---------------------------------
Q psy6828 49 SNPDSDFRYSAIFTPIGIYKGRIFAIKRIPKKS-VDITRAMKKELKI--------------------------------- 94 (392)
Q Consensus 49 ~~~lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~-~~~~~~~~~E~~~--------------------------------- 94 (392)
.+.||+|+||.||+++++.+|+.||||.+++.. ....+++.+|+++
T Consensus 18 ~e~LG~Ga~g~V~rgrnketG~~vAvK~~~~~~~~r~~e~~~~EieilkKLnh~NIVk~f~iee~~~~~~~~~~~vlvmE 97 (732)
T KOG4250|consen 18 DERLGKGAFGNVYRGRNKETGRLVAVKTFNKESSLRPRERWCREIEILKKLNHPNIVKLFDIEETKFLGLVTRLPVLVME 97 (732)
T ss_pred hhhhcCCccceeeeecccccccchhHHhhhhhcccchHHHHHHHHHHHHHcCchhhhhhcccCCccccCcccccceEEEe
Confidence 346999999999999999999999999998743 4667888899888
Q ss_pred --------HHhhcCC--cCCCHHHHHHHHHHHHHHHHHHhcCCcccccCCCCCceEEc--CCce--EEEeccccchhccc
Q psy6828 95 --------DIMENED--VKLDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLVD--SRWV--VKLADFGLTEFKRD 160 (392)
Q Consensus 95 --------~~l~~~~--~~l~~~~~~~i~~qi~~~l~ylH~~~iiiHrDlKp~NIll~--~~~~--~kl~DFGla~~~~~ 160 (392)
.+++... ..|++.++..++.++..||.|||++|| +||||||.||++- .+|+ .||+|||.|+.+.+
T Consensus 98 yC~gGsL~~~L~~PEN~~GLpE~e~l~lL~d~~~al~~LrEn~I-vHRDlKP~NIvl~~Gedgq~IyKLtDfG~Arel~d 176 (732)
T KOG4250|consen 98 YCSGGSLRKVLNSPENAYGLPESEFLDLLSDLVSALRHLRENGI-VHRDLKPGNIVLQIGEDGQSIYKLTDFGAARELDD 176 (732)
T ss_pred ecCCCcHHHHhcCcccccCCCHHHHHHHHHHHHHHHHHHHHcCc-eeccCCCCcEEEeecCCCceEEeeecccccccCCC
Confidence 2222111 149999999999999999999999999 9999999999984 3343 79999999998766
Q ss_pred cccc-----------------------cccccceeeeeee
Q psy6828 161 AEYT-----------------------GTDQHSFLQHTYH 177 (392)
Q Consensus 161 ~~~~-----------------------~~d~~s~g~~~~~ 177 (392)
++.. ..|-||||+++|+
T Consensus 177 ~s~~~S~vGT~~YLhPel~E~q~~y~~tVDLWS~GvtlY~ 216 (732)
T KOG4250|consen 177 NSLFTSLVGTEEYLHPELYERQKKYTATVDLWSFGVTLYE 216 (732)
T ss_pred CCeeeeecCchhhcChHHHhhccCcCceeehhhhhhHHHH
Confidence 5432 2299999999999
No 55
>KOG0033|consensus
Probab=99.84 E-value=5.5e-23 Score=177.88 Aligned_cols=198 Identities=20% Similarity=0.205 Sum_probs=144.6
Q ss_pred eeeeccCCCCCcceeEEEEEEEeecCcEEEEEEcCCCCh--hHHHHHHHHHHH--------------------------H
Q psy6828 44 QVSLSSNPDSDFRYSAIFTPIGIYKGRIFAIKRIPKKSV--DITRAMKKELKI--------------------------D 95 (392)
Q Consensus 44 ~~~~~~~~lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~~--~~~~~~~~E~~~--------------------------~ 95 (392)
..|-....||+|.|++|+++.+..+|+.+|+|.++.... ...+.+.+|+.| +
T Consensus 11 d~y~l~e~igkG~FSvVrRc~~~~tg~~fa~kiin~~k~~~~~~e~l~rEarIC~~LqHP~IvrL~~ti~~~~~~ylvFe 90 (355)
T KOG0033|consen 11 DNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQEESFHYLVFD 90 (355)
T ss_pred hhhhHHHHHccCchHHHHHHHhccchHHHHHHHhhhhhhccccHHHHHHHHHHHHhcCCCcEeehhhhhcccceeEEEEe
Confidence 334456679999999999999999999999999976654 457788899888 2
Q ss_pred HhhcCC--------cCCCHHHHHHHHHHHHHHHHHHhcCCcccccCCCCCceEEcCC---ceEEEeccccchhcccccc-
Q psy6828 96 IMENED--------VKLDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLVDSR---WVVKLADFGLTEFKRDAEY- 163 (392)
Q Consensus 96 ~l~~~~--------~~l~~~~~~~i~~qi~~~l~ylH~~~iiiHrDlKp~NIll~~~---~~~kl~DFGla~~~~~~~~- 163 (392)
++...+ .-+++..+..+++||+++|.|+|.++| +|||+||+|+|+.+. ..+||+|||++..+.+...
T Consensus 91 ~m~G~dl~~eIV~R~~ySEa~aSH~~rQiLeal~yCH~n~I-vHRDvkP~nllLASK~~~A~vKL~~FGvAi~l~~g~~~ 169 (355)
T KOG0033|consen 91 LVTGGELFEDIVAREFYSEADASHCIQQILEALAYCHSNGI-VHRDLKPENLLLASKAKGAAVKLADFGLAIEVNDGEAW 169 (355)
T ss_pred cccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCc-eeccCChhheeeeeccCCCceeecccceEEEeCCcccc
Confidence 222111 147888899999999999999999999 999999999999654 4599999999987653321
Q ss_pred ---------------------ccccccceeeeeee-----ccCCCCcc----------cccc---------cccchhhhc
Q psy6828 164 ---------------------TGTDQHSFLQHTYH-----VNRAGSTE----------SLHC---------KCDEALLFE 198 (392)
Q Consensus 164 ---------------------~~~d~~s~g~~~~~-----~~~~~~~~----------~~d~---------~~~~~lL~~ 198 (392)
...|+|+.|+++|. .|.+.++. ..|+ .+...++.+
T Consensus 170 ~G~~GtP~fmaPEvvrkdpy~kpvDiW~cGViLfiLL~G~~PF~~~~~~rlye~I~~g~yd~~~~~w~~is~~Ak~Lvrr 249 (355)
T KOG0033|consen 170 HGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPFWDEDQHRLYEQIKAGAYDYPSPEWDTVTPEAKSLIRR 249 (355)
T ss_pred ccccCCCcccCHHHhhcCCCCCcchhhhhhHHHHHHHhCCCCCCCccHHHHHHHHhccccCCCCcccCcCCHHHHHHHHH
Confidence 23399999999988 22222111 1111 456778888
Q ss_pred cCCHHHHHHhhcCCCccccccCceEEEeecccchhhhhccCChhhHHHhHHHHH
Q psy6828 199 MLPRSVAEQLRRGTSVEAESFDSVTIYFSDIVGFTAMSAESTPLQVVDFLNDLY 252 (392)
Q Consensus 199 ~lp~~v~~~l~~~~~~~~~~~~~vtvlf~DI~~ft~l~~~~~p~~l~~~Ln~~~ 252 (392)
||.-..++++...+.+..++ |++-...+......+.++.|..|-
T Consensus 250 ML~~dP~kRIta~EAL~HpW----------i~~r~~~As~~H~~dtvd~lrkfN 293 (355)
T KOG0033|consen 250 MLTVNPKKRITADEALKHPW----------ICNRERVASAIHRQDTVDCLKKFN 293 (355)
T ss_pred HhccChhhhccHHHHhCCch----------hcchHHHHHHhhhHHHHHHHHHhh
Confidence 88888888887766666665 344455555666667777776654
No 56
>PTZ00263 protein kinase A catalytic subunit; Provisional
Probab=99.84 E-value=2.3e-21 Score=184.73 Aligned_cols=130 Identities=19% Similarity=0.230 Sum_probs=104.5
Q ss_pred eeccCCCCCcceeEEEEEEEeecCcEEEEEEcCCCCh---hHHHHHHHHHHH----------------------------
Q psy6828 46 SLSSNPDSDFRYSAIFTPIGIYKGRIFAIKRIPKKSV---DITRAMKKELKI---------------------------- 94 (392)
Q Consensus 46 ~~~~~~lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~~---~~~~~~~~E~~~---------------------------- 94 (392)
|...+.||+|+||.||+|.+..+++.||+|.+.+... ...+.+.+|+.+
T Consensus 20 y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~ 99 (329)
T PTZ00263 20 FEMGETLGTGSFGRVRIAKHKGTGEYYAIKCLKKREILKMKQVQHVAQEKSILMELSHPFIVNMMCSFQDENRVYFLLEF 99 (329)
T ss_pred eEEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHhCCCCCCCcEEEEEEcCCEEEEEEcC
Confidence 4456779999999999999999999999999975432 334567777766
Q ss_pred -------HHhhcCCcCCCHHHHHHHHHHHHHHHHHHhcCCcccccCCCCCceEEcCCceEEEeccccchhccccc-----
Q psy6828 95 -------DIMENEDVKLDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLVDSRWVVKLADFGLTEFKRDAE----- 162 (392)
Q Consensus 95 -------~~l~~~~~~l~~~~~~~i~~qi~~~l~ylH~~~iiiHrDlKp~NIll~~~~~~kl~DFGla~~~~~~~----- 162 (392)
+++... ..+++..+..++.|++.||.|||++++ +||||||+|||++.++.+||+|||+++......
T Consensus 100 ~~~~~L~~~l~~~-~~~~~~~~~~~~~qi~~aL~~LH~~~i-vH~dlkp~NIll~~~~~~kl~Dfg~~~~~~~~~~~~~g 177 (329)
T PTZ00263 100 VVGGELFTHLRKA-GRFPNDVAKFYHAELVLAFEYLHSKDI-IYRDLKPENLLLDNKGHVKVTDFGFAKKVPDRTFTLCG 177 (329)
T ss_pred CCCChHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHHCCe-eecCCCHHHEEECCCCCEEEeeccCceEcCCCcceecC
Confidence 222222 268999999999999999999999999 999999999999999999999999987543221
Q ss_pred ---------------cccccccceeeeeee
Q psy6828 163 ---------------YTGTDQHSFLQHTYH 177 (392)
Q Consensus 163 ---------------~~~~d~~s~g~~~~~ 177 (392)
....|+||+|+++|+
T Consensus 178 t~~y~aPE~~~~~~~~~~~DiwslG~il~e 207 (329)
T PTZ00263 178 TPEYLAPEVIQSKGHGKAVDWWTMGVLLYE 207 (329)
T ss_pred ChhhcCHHHHcCCCCCCcceeechHHHHHH
Confidence 123488888888888
No 57
>cd05585 STKc_YPK1_like Catalytic domain of Yeast Protein Kinase 1-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Yeast protein kinase 1 (YPK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YPK1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the AGC STKs, Saccharomyces cerevisiae YPK1 and Schizosaccharomyces pombe Gad8p. YPK1 is required for cell growth and acts as a downstream kinase in the sphingolipid-mediated signaling pathway of yeast. It also plays a role in efficient endocytosis and in the maintenance of cell wall integrity. Gad8p is a downstream target of Tor1p, the fission yeast homolog of mTOR. It pl
Probab=99.84 E-value=3.6e-21 Score=182.00 Aligned_cols=124 Identities=19% Similarity=0.221 Sum_probs=99.4
Q ss_pred CCCcceeEEEEEEEeecCcEEEEEEcCCCC---hhHHHHHHHHHHH----------------------------------
Q psy6828 52 DSDFRYSAIFTPIGIYKGRIFAIKRIPKKS---VDITRAMKKELKI---------------------------------- 94 (392)
Q Consensus 52 lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~---~~~~~~~~~E~~~---------------------------------- 94 (392)
||+|+||.||++.+..+++.||+|.+.+.. ......+.+|+.+
T Consensus 1 lg~G~~g~Vy~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~g~L 80 (312)
T cd05585 1 IGKGSFGKVMQVRKRDTQRIYALKTIRKAHIVSRSEVTHTLAERTVLAQVNCPFIVPLKFSFQSPEKLYLVLAFINGGEL 80 (312)
T ss_pred CCcCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCcEeceeeEEecCCeEEEEEcCCCCCcH
Confidence 699999999999999999999999997532 2334456667665
Q ss_pred -HHhhcCCcCCCHHHHHHHHHHHHHHHHHHhcCCcccccCCCCCceEEcCCceEEEeccccchhccccc-----------
Q psy6828 95 -DIMENEDVKLDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLVDSRWVVKLADFGLTEFKRDAE----------- 162 (392)
Q Consensus 95 -~~l~~~~~~l~~~~~~~i~~qi~~~l~ylH~~~iiiHrDlKp~NIll~~~~~~kl~DFGla~~~~~~~----------- 162 (392)
+++.. ...+++..+..++.|++.||.|||++++ +||||||+|||++.++.+||+|||+++......
T Consensus 81 ~~~l~~-~~~~~~~~~~~~~~qi~~~l~~lH~~~i-~HrDlkp~Nili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~gt~~ 158 (312)
T cd05585 81 FHHLQR-EGRFDLSRARFYTAELLCALENLHKFNV-IYRDLKPENILLDYQGHIALCDFGLCKLNMKDDDKTNTFCGTPE 158 (312)
T ss_pred HHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHhCCe-EeCCCCHHHeEECCCCcEEEEECcccccCccCCCccccccCCcc
Confidence 23322 2368999999999999999999999999 999999999999999999999999987532110
Q ss_pred ------------cccccccceeeeeee
Q psy6828 163 ------------YTGTDQHSFLQHTYH 177 (392)
Q Consensus 163 ------------~~~~d~~s~g~~~~~ 177 (392)
....|+||+|+++|+
T Consensus 159 y~aPE~~~~~~~~~~~DvwslGvil~e 185 (312)
T cd05585 159 YLAPELLLGHGYTKAVDWWTLGVLLYE 185 (312)
T ss_pred cCCHHHHcCCCCCCccceechhHHHHH
Confidence 112489999998888
No 58
>cd05601 STKc_CRIK Catalytic domain of the Protein Serine/Threonine Kinase, Citron Rho-interacting kinase. Serine/Threonine Kinases (STKs), Citron Rho-interacting kinase (CRIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CRIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CRIK is also called citron kinase. It contains a catalytic domain, a central coiled-coil domain, and a C-terminal region containing a Rho-binding domain (RBD), a zinc finger, and a pleckstrin homology (PH) domain, in addition to other motifs. CRIK, an effector of the small GTPase Rho, plays an important function during cytokinesis and affects its contractile process. CRIK-deficient mice show severe ataxia and epilepsy as a result of abnor
Probab=99.84 E-value=5.3e-21 Score=182.28 Aligned_cols=111 Identities=19% Similarity=0.274 Sum_probs=92.7
Q ss_pred eccCCCCCcceeEEEEEEEeecCcEEEEEEcCCCCh---hHHHHHHHHHHH-----------------------------
Q psy6828 47 LSSNPDSDFRYSAIFTPIGIYKGRIFAIKRIPKKSV---DITRAMKKELKI----------------------------- 94 (392)
Q Consensus 47 ~~~~~lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~~---~~~~~~~~E~~~----------------------------- 94 (392)
...+.||+|+||.||++.+..+|+.||+|.+++... ...+.+..|+.+
T Consensus 4 ~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~i~~~~~~~~i~~~~~~~~~~~~~~lv~e~~ 83 (330)
T cd05601 4 DVKSLVGRGHFGEVQVVREKATGDIYAMKVMKKSVLLAQETVSFFEEERDILSISNSPWIPQLQYAFQDKDNLYLVMEYQ 83 (330)
T ss_pred eEEEEEEeccCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCcceeeEEecCCeEEEEECCC
Confidence 345679999999999999999999999999976432 234456666665
Q ss_pred ------HHhhcCCcCCCHHHHHHHHHHHHHHHHHHhcCCcccccCCCCCceEEcCCceEEEeccccchhc
Q psy6828 95 ------DIMENEDVKLDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLVDSRWVVKLADFGLTEFK 158 (392)
Q Consensus 95 ------~~l~~~~~~l~~~~~~~i~~qi~~~l~ylH~~~iiiHrDlKp~NIll~~~~~~kl~DFGla~~~ 158 (392)
+++......+++..+..++.|++.||.|||+.++ +||||||+|||++.++.+||+|||++...
T Consensus 84 ~~~~L~~~l~~~~~~l~~~~~~~~~~qi~~aL~~lH~~~i-~H~Dlkp~NIll~~~~~~kL~Dfg~a~~~ 152 (330)
T cd05601 84 PGGDLLSLLNRYEDQFDEDMAQFYLAELVLAIHSVHQMGY-VHRDIKPENVLIDRTGHIKLADFGSAARL 152 (330)
T ss_pred CCCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCe-EcccCchHheEECCCCCEEeccCCCCeEC
Confidence 3444433469999999999999999999999999 99999999999999999999999998653
No 59
>cd07871 STKc_PCTAIRE3 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-3 kinase. Serine/Threonine Kinases (STKs), PCTAIRE-3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-3 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-3 shows a restricted pattern of expression and is present in brain, kidney, and intestine. It is elevated in Alzheimer's disease (AD) and has been shown to associate with paired helical filament
Probab=99.84 E-value=2.3e-21 Score=181.17 Aligned_cols=112 Identities=22% Similarity=0.357 Sum_probs=92.6
Q ss_pred eeccCCCCCcceeEEEEEEEeecCcEEEEEEcCCCCh-hHHHHHHHHHHH------------------------------
Q psy6828 46 SLSSNPDSDFRYSAIFTPIGIYKGRIFAIKRIPKKSV-DITRAMKKELKI------------------------------ 94 (392)
Q Consensus 46 ~~~~~~lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~~-~~~~~~~~E~~~------------------------------ 94 (392)
|...+.||+|+||.||+|.+..+++.||+|.++.... .....+.+|+.+
T Consensus 7 y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~ 86 (288)
T cd07871 7 YVKLDKLGEGTYATVFKGRSKLTENLVALKEIRLEHEEGAPCTAIREVSLLKNLKHANIVTLHDIIHTERCLTLVFEYLD 86 (288)
T ss_pred ceEeeEEecCCCEEEEEEEECCCCCEEEEEEecccccCCcchhHHHHHHHHHhCCCCCEeeEEEEEcCCCeEEEEEeCCC
Confidence 5556789999999999999999999999999875432 223455667666
Q ss_pred ----HHhhcCCcCCCHHHHHHHHHHHHHHHHHHhcCCcccccCCCCCceEEcCCceEEEeccccchhc
Q psy6828 95 ----DIMENEDVKLDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLVDSRWVVKLADFGLTEFK 158 (392)
Q Consensus 95 ----~~l~~~~~~l~~~~~~~i~~qi~~~l~ylH~~~iiiHrDlKp~NIll~~~~~~kl~DFGla~~~ 158 (392)
+++......+++..+..++.|++.||.|||++++ +||||||+|||++.++.+||+|||+++..
T Consensus 87 ~~l~~~l~~~~~~~~~~~~~~~~~qi~~aL~~LH~~~i-vH~dlkp~Nil~~~~~~~kl~DfG~~~~~ 153 (288)
T cd07871 87 SDLKQYLDNCGNLMSMHNVKIFMFQLLRGLSYCHKRKI-LHRDLKPQNLLINEKGELKLADFGLARAK 153 (288)
T ss_pred cCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCc-ccCCCCHHHEEECCCCCEEECcCcceeec
Confidence 3333333357899999999999999999999999 99999999999999999999999998653
No 60
>cd05626 STKc_LATS2 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 2. Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. LATS2 is an essential mitotic regulator responsible for coordinating accurate cytokinesis completion and governing the stabilization of other mitotic regulators. It is also critical in the maintenance of proper chromosome number, genomic stability, mitotic fidelity, and the integrity of centrosome duplication. Downregulation of LATS2 is associated with po
Probab=99.84 E-value=2.9e-21 Score=187.78 Aligned_cols=110 Identities=19% Similarity=0.265 Sum_probs=91.9
Q ss_pred eeccCCCCCcceeEEEEEEEeecCcEEEEEEcCCCCh---hHHHHHHHHHHH----------------------------
Q psy6828 46 SLSSNPDSDFRYSAIFTPIGIYKGRIFAIKRIPKKSV---DITRAMKKELKI---------------------------- 94 (392)
Q Consensus 46 ~~~~~~lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~~---~~~~~~~~E~~~---------------------------- 94 (392)
|...+.||+|+||+||++.+..+++.||||++.+... ...+.+.+|+.+
T Consensus 3 f~~~~~LG~G~~g~Vy~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~E~~il~~l~h~~iv~l~~~~~~~~~~~lv~E~ 82 (381)
T cd05626 3 FVKIKTLGIGAFGEVCLACKVDTHALYAMKTLRKKDVLNRNQVAHVKAERDILAEADNEWVVKLYYSFQDKDNLYFVMDY 82 (381)
T ss_pred ceEEEEEeecCCEEEEEEEECCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhcCCCCeeeeEEEEecCCEEEEEEec
Confidence 3456679999999999999999999999999976532 334567777776
Q ss_pred -------HHhhcCCcCCCHHHHHHHHHHHHHHHHHHhcCCcccccCCCCCceEEcCCceEEEeccccchh
Q psy6828 95 -------DIMENEDVKLDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLVDSRWVVKLADFGLTEF 157 (392)
Q Consensus 95 -------~~l~~~~~~l~~~~~~~i~~qi~~~l~ylH~~~iiiHrDlKp~NIll~~~~~~kl~DFGla~~ 157 (392)
+++.+. ..+++..+..++.|++.||.|||++++ +||||||+|||++.++.+||+|||+++.
T Consensus 83 ~~gg~L~~~l~~~-~~~~e~~~~~~~~qi~~aL~~LH~~gi-vHrDlKp~Nili~~~~~~kL~DFGl~~~ 150 (381)
T cd05626 83 IPGGDMMSLLIRM-EVFPEVLARFYIAELTLAIESVHKMGF-IHRDIKPDNILIDLDGHIKLTDFGLCTG 150 (381)
T ss_pred CCCCcHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHhCCe-eecCCcHHHEEECCCCCEEEeeCcCCcc
Confidence 222222 258999999999999999999999999 9999999999999999999999999753
No 61
>KOG0986|consensus
Probab=99.84 E-value=4.3e-22 Score=185.62 Aligned_cols=159 Identities=18% Similarity=0.170 Sum_probs=123.4
Q ss_pred ceeeeccCCCCCcceeEEEEEEEeecCcEEEEEEcCCCChh---HHHHHHHHHHH-------------------------
Q psy6828 43 SQVSLSSNPDSDFRYSAIFTPIGIYKGRIFAIKRIPKKSVD---ITRAMKKELKI------------------------- 94 (392)
Q Consensus 43 ~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~~~---~~~~~~~E~~~------------------------- 94 (392)
...+...+.||+||||.||-|....||+-||+|++.++.+. ......+|..+
T Consensus 184 ~n~F~~~RvlGkGGFGEV~acqvraTGKMYAcKkL~KKRiKkr~ge~maLnEk~iL~kV~s~FiVslaYAfeTkd~LClV 263 (591)
T KOG0986|consen 184 KNTFRVYRVLGKGGFGEVCACQVRATGKMYACKKLDKKRIKKRKGETMALNEKQILEKVSSPFIVSLAYAFETKDALCLV 263 (591)
T ss_pred ccceeeeEEEecccccceeEEEEecchhhHHHHHHHHHHHHHhhhhHHhhHHHHHHHHhccCcEEEEeeeecCCCceEEE
Confidence 34456688999999999999999999999999999766442 22334555555
Q ss_pred -HHhhc----------CCcCCCHHHHHHHHHHHHHHHHHHhcCCcccccCCCCCceEEcCCceEEEeccccchhcccccc
Q psy6828 95 -DIMEN----------EDVKLDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLVDSRWVVKLADFGLTEFKRDAEY 163 (392)
Q Consensus 95 -~~l~~----------~~~~l~~~~~~~i~~qi~~~l~ylH~~~iiiHrDlKp~NIll~~~~~~kl~DFGla~~~~~~~~ 163 (392)
++|+. ++..|++..+..++.||++||++||+.+| +.|||||+|||||+.|+++|+|+|+|..+.....
T Consensus 264 LtlMNGGDLkfHiyn~g~~gF~e~ra~FYAAEi~cGLehlH~~~i-VYRDLKPeNILLDd~GhvRISDLGLAvei~~g~~ 342 (591)
T KOG0986|consen 264 LTLMNGGDLKFHIYNHGNPGFDEQRARFYAAEIICGLEHLHRRRI-VYRDLKPENILLDDHGHVRISDLGLAVEIPEGKP 342 (591)
T ss_pred EEeecCCceeEEeeccCCCCCchHHHHHHHHHHHhhHHHHHhcce-eeccCChhheeeccCCCeEeeccceEEecCCCCc
Confidence 33333 33359999999999999999999999999 9999999999999999999999999988776554
Q ss_pred ccccccceeeeeeeccC----CCCcccccccccchhhhccCCHHHH
Q psy6828 164 TGTDQHSFLQHTYHVNR----AGSTESLHCKCDEALLFEMLPRSVA 205 (392)
Q Consensus 164 ~~~d~~s~g~~~~~~~~----~~~~~~~d~~~~~~lL~~~lp~~v~ 205 (392)
.... .|+..|++|+ ..++-+.|++..+.+++.|+..+..
T Consensus 343 ~~~r---vGT~GYMAPEvl~ne~Y~~s~Dwf~lGCllYemi~G~sP 385 (591)
T KOG0986|consen 343 IRGR---VGTVGYMAPEVLQNEVYDFSPDWFSLGCLLYEMIAGHSP 385 (591)
T ss_pred cccc---cCcccccCHHHHcCCcccCCccHHHHHhHHHHHHcccCc
Confidence 3333 4777777666 2345566777888888777754433
No 62
>cd05593 STKc_PKB_gamma Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B gamma. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, gamma (or Akt3) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-gamma is predominantly expressed in neuronal tissues. Mice deficient in PKB-gamma show a reduction in brain weight due to the decreases in cell size and cell number. PKB-gamma has also been shown to be upregulate
Probab=99.84 E-value=5.6e-21 Score=182.02 Aligned_cols=106 Identities=19% Similarity=0.265 Sum_probs=88.6
Q ss_pred CCCCcceeEEEEEEEeecCcEEEEEEcCCCCh---hHHHHHHHHHHH--------------------------HHhhcC-
Q psy6828 51 PDSDFRYSAIFTPIGIYKGRIFAIKRIPKKSV---DITRAMKKELKI--------------------------DIMENE- 100 (392)
Q Consensus 51 ~lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~~---~~~~~~~~E~~~--------------------------~~l~~~- 100 (392)
.||+|+||.||++.+..+++.||+|++.+... .....+.+|+.+ +|+.++
T Consensus 2 ~lG~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~Ey~~~g~ 81 (328)
T cd05593 2 LLGKGTFGKVILVREKASGKYYAMKILKKEVIIAKDEVAHTLTESRVLKNTRHPFLTSLKYSFQTKDRLCFVMEYVNGGE 81 (328)
T ss_pred eeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCcceEEEEEcCCEEEEEEeCCCCCC
Confidence 58999999999999999999999999975432 234456667665 222221
Q ss_pred -------CcCCCHHHHHHHHHHHHHHHHHHhcCCcccccCCCCCceEEcCCceEEEeccccchh
Q psy6828 101 -------DVKLDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLVDSRWVVKLADFGLTEF 157 (392)
Q Consensus 101 -------~~~l~~~~~~~i~~qi~~~l~ylH~~~iiiHrDlKp~NIll~~~~~~kl~DFGla~~ 157 (392)
...+++.++..++.||+.||.|||++++ +||||||+|||++.++.+||+|||+++.
T Consensus 82 L~~~l~~~~~l~~~~~~~~~~qi~~aL~~LH~~~i-vHrDikp~NIll~~~~~~kL~DfG~~~~ 144 (328)
T cd05593 82 LFFHLSRERVFSEDRTRFYGAEIVSALDYLHSGKI-VYRDLKLENLMLDKDGHIKITDFGLCKE 144 (328)
T ss_pred HHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCe-EecccCHHHeEECCCCcEEEecCcCCcc
Confidence 2258999999999999999999999999 9999999999999999999999999875
No 63
>KOG0584|consensus
Probab=99.84 E-value=1.5e-21 Score=188.97 Aligned_cols=139 Identities=20% Similarity=0.322 Sum_probs=104.9
Q ss_pred cccccccccceeeeccccceeeeeeccccccccceeeeccCCCCCcceeEEEEEEEeecCcEEEEEEcCC-CChhHHHHH
Q psy6828 10 GLNSILRQSTVVKLVDNHKLFDWFCSWFQNVHTSQVSLSSNPDSDFRYSAIFTPIGIYKGRIFAIKRIPK-KSVDITRAM 88 (392)
Q Consensus 10 ~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vAiK~~~~-~~~~~~~~~ 88 (392)
.++++..||.+|+.|+|||||++|.+|.+... ...+-|-.+.. ..+.
T Consensus 84 ~leR~~~Ev~lLKsL~H~NIirfy~SW~d~~n---------------------------~~in~iTEL~TSGtLr----- 131 (632)
T KOG0584|consen 84 ELERLYSEVHLLKSLKHPNIIRFYDSWVDTDN---------------------------KTINFITELFTSGTLR----- 131 (632)
T ss_pred HHHHHHHHHHHHccCCCCceeeeeeheecCCC---------------------------ceeeeeeecccCCcHH-----
Confidence 35789999999999999999999999998742 11111222211 1111
Q ss_pred HHHHHHHHhhcCCcCCCHHHHHHHHHHHHHHHHHHhcCCc-ccccCCCCCceEEcCC-ceEEEeccccchhccccccc--
Q psy6828 89 KKELKIDIMENEDVKLDNMFIASLVADILRGMLYLHDSAL-RYHGNLKASNCLVDSR-WVVKLADFGLTEFKRDAEYT-- 164 (392)
Q Consensus 89 ~~E~~~~~l~~~~~~l~~~~~~~i~~qi~~~l~ylH~~~i-iiHrDlKp~NIll~~~-~~~kl~DFGla~~~~~~~~~-- 164 (392)
.|.+.. +..+.+.++.|++||+.||.|||++.+ |||||||.+||+++.+ |.+||+|+|||.........
T Consensus 132 ------~Y~kk~-~~vn~kaik~W~RQILkGL~yLHs~~PPIIHRDLKCDNIFinG~~G~VKIGDLGLAtl~r~s~aksv 204 (632)
T KOG0584|consen 132 ------EYRKKH-RRVNIKAIKSWCRQILKGLVYLHSQDPPIIHRDLKCDNIFVNGNLGEVKIGDLGLATLLRKSHAKSV 204 (632)
T ss_pred ------HHHHHh-ccCCHHHHHHHHHHHHHHhhhhhcCCCCccccccccceEEEcCCcCceeecchhHHHHhhcccccee
Confidence 122222 268889999999999999999998754 6999999999999765 89999999999976543322
Q ss_pred ------------------cccccceeeeeee--ccCCCCcccc
Q psy6828 165 ------------------GTDQHSFLQHTYH--VNRAGSTESL 187 (392)
Q Consensus 165 ------------------~~d~~s~g~~~~~--~~~~~~~~~~ 187 (392)
..||||||+++.| +.+|||.+..
T Consensus 205 IGTPEFMAPEmYEE~YnE~VDVYaFGMCmLEMvT~eYPYsEC~ 247 (632)
T KOG0584|consen 205 IGTPEFMAPEMYEENYNELVDVYAFGMCMLEMVTSEYPYSECT 247 (632)
T ss_pred ccCccccChHHHhhhcchhhhhhhhhHHHHHHHhccCChhhhC
Confidence 1299999999999 7789988743
No 64
>cd05599 STKc_NDR_like Catalytic domain of Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Nuclear Dbf2-Related (NDR) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. NDR kinases regulate mitosis, cell growth, embryonic development, and neurological processes. They are also required for proper centrosome duplica
Probab=99.84 E-value=3.3e-21 Score=186.17 Aligned_cols=110 Identities=19% Similarity=0.254 Sum_probs=91.6
Q ss_pred eccCCCCCcceeEEEEEEEeecCcEEEEEEcCCCCh---hHHHHHHHHHHH-----------------------------
Q psy6828 47 LSSNPDSDFRYSAIFTPIGIYKGRIFAIKRIPKKSV---DITRAMKKELKI----------------------------- 94 (392)
Q Consensus 47 ~~~~~lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~~---~~~~~~~~E~~~----------------------------- 94 (392)
...+.||+|+||.||++.+..+++.||||++.+... .....+.+|+.+
T Consensus 4 ~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~l~h~~iv~~~~~~~~~~~~~lv~E~~ 83 (364)
T cd05599 4 ESIKVIGRGAFGEVRLVQKKDTGHIYAMKKLRKSEMLEKEQVAHVRAERDILAEADNPWVVKLYYSFQDENYLYLIMEYL 83 (364)
T ss_pred eEEEEEEecCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCcceEEEEEcCCeEEEEECCC
Confidence 345679999999999999999999999999975432 234456667666
Q ss_pred ------HHhhcCCcCCCHHHHHHHHHHHHHHHHHHhcCCcccccCCCCCceEEcCCceEEEeccccchhc
Q psy6828 95 ------DIMENEDVKLDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLVDSRWVVKLADFGLTEFK 158 (392)
Q Consensus 95 ------~~l~~~~~~l~~~~~~~i~~qi~~~l~ylH~~~iiiHrDlKp~NIll~~~~~~kl~DFGla~~~ 158 (392)
+++... ..+++..+..++.|++.||.|||++++ +||||||+|||++.++.+||+|||+++..
T Consensus 84 ~~g~L~~~l~~~-~~l~~~~~~~~~~qi~~aL~~lH~~~i-vH~Dlkp~NIl~~~~~~~kl~Dfg~~~~~ 151 (364)
T cd05599 84 PGGDMMTLLMKK-DTFTEEETRFYIAETILAIDSIHKLGY-IHRDIKPDNLLLDAKGHIKLSDFGLCTGL 151 (364)
T ss_pred CCcHHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHHCCe-EeccCCHHHeEECCCCCEEEeecccceec
Confidence 223222 268999999999999999999999999 99999999999999999999999998653
No 65
>cd05629 STKc_NDR_like_fungal Catalytic domain of Fungal Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), NDR kinase subfamily, fungal NDR-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group is composed of fungal NDR-like proteins including Saccharomyces cerevisiae CBK1 (or CBK1p), Schizosaccharomyces pombe Orb6 (or Orb6p), Ustilago maydis Ukc1 (or Ukc1p), and Neurospora crassa Cot1. Like NDR kinase, group members contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. CBK1 is an essential component in the RAM (regulation of
Probab=99.84 E-value=4.6e-21 Score=186.15 Aligned_cols=109 Identities=19% Similarity=0.280 Sum_probs=90.4
Q ss_pred eccCCCCCcceeEEEEEEEeecCcEEEEEEcCCCCh---hHHHHHHHHHHH--------------------------HHh
Q psy6828 47 LSSNPDSDFRYSAIFTPIGIYKGRIFAIKRIPKKSV---DITRAMKKELKI--------------------------DIM 97 (392)
Q Consensus 47 ~~~~~lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~~---~~~~~~~~E~~~--------------------------~~l 97 (392)
...+.||+|+||.||++.+..+++.||||++.+... ...+.+.+|+.+ +|+
T Consensus 4 ~~~~~lG~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~~~~~~~~~~~~~lv~E~~ 83 (377)
T cd05629 4 HTVKVIGKGAFGEVRLVQKKDTGKIYAMKTLLKSEMFKKDQLAHVKAERDVLAESDSPWVVSLYYSFQDAQYLYLIMEFL 83 (377)
T ss_pred eEeEEEeecCCEEEEEEEECCCCCEEEEEEEEHHHHHHhHHHHHHHHHHHHHHhCCCCCcceEEEEEEcCCeeEEEEeCC
Confidence 345679999999999999999999999999865432 234556777766 222
Q ss_pred hc--------CCcCCCHHHHHHHHHHHHHHHHHHhcCCcccccCCCCCceEEcCCceEEEeccccch
Q psy6828 98 EN--------EDVKLDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLVDSRWVVKLADFGLTE 156 (392)
Q Consensus 98 ~~--------~~~~l~~~~~~~i~~qi~~~l~ylH~~~iiiHrDlKp~NIll~~~~~~kl~DFGla~ 156 (392)
.. ....+++..++.++.|++.||.|||++++ +||||||+|||++.++.+||+|||+++
T Consensus 84 ~gg~L~~~l~~~~~~~~~~~~~~~~ql~~aL~~LH~~gi-vHrDlkp~NIll~~~~~~kl~DfGla~ 149 (377)
T cd05629 84 PGGDLMTMLIKYDTFSEDVTRFYMAECVLAIEAVHKLGF-IHRDIKPDNILIDRGGHIKLSDFGLST 149 (377)
T ss_pred CCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCe-eccCCCHHHEEECCCCCEEEeeccccc
Confidence 21 12258899999999999999999999999 999999999999999999999999986
No 66
>cd05595 STKc_PKB_beta Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B beta. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, beta (or Akt2) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-beta is the predominant PKB isoform expressed in insulin-responsive tissues. It plays a critical role in the regulation of glucose homeostasis. It is also implicated in muscle cell differentiation. Mice deficient in
Probab=99.84 E-value=4.3e-21 Score=182.40 Aligned_cols=126 Identities=17% Similarity=0.211 Sum_probs=99.6
Q ss_pred CCCCcceeEEEEEEEeecCcEEEEEEcCCCCh---hHHHHHHHHHHH--------------------------HHhhc--
Q psy6828 51 PDSDFRYSAIFTPIGIYKGRIFAIKRIPKKSV---DITRAMKKELKI--------------------------DIMEN-- 99 (392)
Q Consensus 51 ~lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~~---~~~~~~~~E~~~--------------------------~~l~~-- 99 (392)
.||+|+||.||++.+..+|+.||+|++.+... .....+.+|+.+ +|+..
T Consensus 2 ~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~i~~~~~~~~~~~~~~lv~E~~~~~~ 81 (323)
T cd05595 2 LLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTALKYAFQTHDRLCFVMEYANGGE 81 (323)
T ss_pred eeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhCCCCCCcceeeEEecCCEEEEEEeCCCCCc
Confidence 58999999999999999999999999975422 233445566655 22222
Q ss_pred ------CCcCCCHHHHHHHHHHHHHHHHHHhcCCcccccCCCCCceEEcCCceEEEeccccchhccccc-----------
Q psy6828 100 ------EDVKLDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLVDSRWVVKLADFGLTEFKRDAE----------- 162 (392)
Q Consensus 100 ------~~~~l~~~~~~~i~~qi~~~l~ylH~~~iiiHrDlKp~NIll~~~~~~kl~DFGla~~~~~~~----------- 162 (392)
....+++..+..++.|++.||.|||++++ +||||||+|||++.++.+||+|||+++......
T Consensus 82 L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~~i-vH~Dlkp~NIll~~~~~~kL~Dfg~~~~~~~~~~~~~~~~gt~~ 160 (323)
T cd05595 82 LFFHLSRERVFTEERARFYGAEIVSALEYLHSRDV-VYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKTFCGTPE 160 (323)
T ss_pred HHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCe-EecCCCHHHEEEcCCCCEEecccHHhccccCCCCccccccCCcC
Confidence 12258999999999999999999999999 999999999999999999999999986421110
Q ss_pred ------------cccccccceeeeeee
Q psy6828 163 ------------YTGTDQHSFLQHTYH 177 (392)
Q Consensus 163 ------------~~~~d~~s~g~~~~~ 177 (392)
....|+||+|+++|+
T Consensus 161 y~aPE~~~~~~~~~~~DiwSlGvil~e 187 (323)
T cd05595 161 YLAPEVLEDNDYGRAVDWWGLGVVMYE 187 (323)
T ss_pred cCCcccccCCCCCchhchhhhHHHHHH
Confidence 112499999999988
No 67
>cd05627 STKc_NDR2 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 2. Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. In addition, NDR2 plays a role in regul
Probab=99.84 E-value=8e-21 Score=183.31 Aligned_cols=109 Identities=21% Similarity=0.269 Sum_probs=90.4
Q ss_pred ccCCCCCcceeEEEEEEEeecCcEEEEEEcCCCCh---hHHHHHHHHHHH------------------------------
Q psy6828 48 SSNPDSDFRYSAIFTPIGIYKGRIFAIKRIPKKSV---DITRAMKKELKI------------------------------ 94 (392)
Q Consensus 48 ~~~~lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~~---~~~~~~~~E~~~------------------------------ 94 (392)
..+.||+|+||.||++.+..+++.||+|++++... .....+.+|+.+
T Consensus 5 ~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~iv~~~~~~~~~~~~~lv~E~~~ 84 (360)
T cd05627 5 SLKVIGRGAFGEVRLVQKKDTGHIYAMKILRKADMLEKEQVAHIRAERDILVEADGAWVVKMFYSFQDKRNLYLIMEFLP 84 (360)
T ss_pred EEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCEEEEEEeCCC
Confidence 34679999999999999999999999999975332 234456667665
Q ss_pred -----HHhhcCCcCCCHHHHHHHHHHHHHHHHHHhcCCcccccCCCCCceEEcCCceEEEeccccchhc
Q psy6828 95 -----DIMENEDVKLDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLVDSRWVVKLADFGLTEFK 158 (392)
Q Consensus 95 -----~~l~~~~~~l~~~~~~~i~~qi~~~l~ylH~~~iiiHrDlKp~NIll~~~~~~kl~DFGla~~~ 158 (392)
+++.+. ..+++..+..++.|++.||.|||++++ +||||||+|||++.++.+||+|||+++..
T Consensus 85 gg~L~~~l~~~-~~l~~~~~~~~~~qi~~~L~~lH~~gi-vHrDLkp~NIli~~~~~vkL~DfG~~~~~ 151 (360)
T cd05627 85 GGDMMTLLMKK-DTLSEEATQFYIAETVLAIDAIHQLGF-IHRDIKPDNLLLDAKGHVKLSDFGLCTGL 151 (360)
T ss_pred CccHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHCCe-EccCCCHHHEEECCCCCEEEeeccCCccc
Confidence 222222 368999999999999999999999999 99999999999999999999999998643
No 68
>cd05625 STKc_LATS1 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 1. Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. Promoter methylation, loss of heterozygosity, and missense mutations targeting the LATS1 gene have also been found in human sarcomas and ovarian cancers. In addition, decreased expression of LATS1 is associated with an aggressive phenotype an
Probab=99.84 E-value=4.4e-21 Score=186.57 Aligned_cols=109 Identities=19% Similarity=0.264 Sum_probs=91.3
Q ss_pred eeccCCCCCcceeEEEEEEEeecCcEEEEEEcCCCCh---hHHHHHHHHHHH----------------------------
Q psy6828 46 SLSSNPDSDFRYSAIFTPIGIYKGRIFAIKRIPKKSV---DITRAMKKELKI---------------------------- 94 (392)
Q Consensus 46 ~~~~~~lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~~---~~~~~~~~E~~~---------------------------- 94 (392)
|...+.||+|+||.||++.+..+++.||+|.+.+... .....+.+|+.+
T Consensus 3 f~~~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~E~~il~~~~h~~iv~~~~~~~~~~~~~lv~E~ 82 (382)
T cd05625 3 FVKIKTLGIGAFGEVCLARKVDTKALYAMKTLRKKDVLLRNQVAHVKAERDILAEADNEWVVRLYYSFQDKDNLYFVMDY 82 (382)
T ss_pred cEEEEEEEeCCCEEEEEEEECCCCCEEEEEEEeHHHhhhHHHHHHHHHHHHHHHhCCCCcCCeEEEEEEeCCEEEEEEeC
Confidence 4456779999999999999999999999999976432 334566777766
Q ss_pred -------HHhhcCCcCCCHHHHHHHHHHHHHHHHHHhcCCcccccCCCCCceEEcCCceEEEeccccch
Q psy6828 95 -------DIMENEDVKLDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLVDSRWVVKLADFGLTE 156 (392)
Q Consensus 95 -------~~l~~~~~~l~~~~~~~i~~qi~~~l~ylH~~~iiiHrDlKp~NIll~~~~~~kl~DFGla~ 156 (392)
+++.+. ..+++..+..++.||+.||.|||++++ +||||||+|||++.++.+||+|||+++
T Consensus 83 ~~gg~L~~~l~~~-~~~~e~~~~~~~~qi~~al~~lH~~~i-vHrDlKp~NILl~~~g~~kL~DFGla~ 149 (382)
T cd05625 83 IPGGDMMSLLIRM-GIFPEDLARFYIAELTCAVESVHKMGF-IHRDIKPDNILIDRDGHIKLTDFGLCT 149 (382)
T ss_pred CCCCcHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHhCCe-ecCCCCHHHEEECCCCCEEEeECCCCc
Confidence 222222 258999999999999999999999999 999999999999999999999999975
No 69
>cd05591 STKc_nPKC_epsilon Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C epsilon. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), epsilon isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-epsilon has been shown to behave as an oncoprotein. Its overexpression contributes to
Probab=99.84 E-value=5.9e-21 Score=181.28 Aligned_cols=126 Identities=20% Similarity=0.213 Sum_probs=98.5
Q ss_pred CCCCcceeEEEEEEEeecCcEEEEEEcCCCCh---hHHHHHHHHHHH---------------------------HHhhc-
Q psy6828 51 PDSDFRYSAIFTPIGIYKGRIFAIKRIPKKSV---DITRAMKKELKI---------------------------DIMEN- 99 (392)
Q Consensus 51 ~lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~~---~~~~~~~~E~~~---------------------------~~l~~- 99 (392)
.||+|+||.||+|.+..+++.||+|.+.+... ...+.+..|..+ +++..
T Consensus 2 ~lG~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~il~~~~~hp~i~~~~~~~~~~~~~~lv~E~~~~~ 81 (321)
T cd05591 2 VLGKGSFGKVMLAELKGTDEVYAIKVLKKDVILQDDDVDCTMTEKRILALAAKHPFLTALHCCFQTKDRLFFVMEYVNGG 81 (321)
T ss_pred ccccCCCeEEEEEEECCCCCEEEEEEEeHHHhhhhhHHHHHHHHHHHHHhccCCCCccceeeEEEcCCeEEEEEeCCCCC
Confidence 58999999999999999999999999975422 223344455444 22221
Q ss_pred -------CCcCCCHHHHHHHHHHHHHHHHHHhcCCcccccCCCCCceEEcCCceEEEeccccchhcccc-----------
Q psy6828 100 -------EDVKLDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLVDSRWVVKLADFGLTEFKRDA----------- 161 (392)
Q Consensus 100 -------~~~~l~~~~~~~i~~qi~~~l~ylH~~~iiiHrDlKp~NIll~~~~~~kl~DFGla~~~~~~----------- 161 (392)
....+++..+..++.|++.||.|||++++ +||||||+|||++.++.+||+|||+++.....
T Consensus 82 ~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~~i-vHrDikp~Nill~~~~~~kL~Dfg~~~~~~~~~~~~~~~~gt~ 160 (321)
T cd05591 82 DLMFQIQRSRKFDEPRSRFYAAEVTLALMFLHRHGV-IYRDLKLDNILLDAEGHCKLADFGMCKEGILNGVTTTTFCGTP 160 (321)
T ss_pred cHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCe-eccCCCHHHeEECCCCCEEEeecccceecccCCccccccccCc
Confidence 12258899999999999999999999999 99999999999999999999999988642110
Q ss_pred ------------ccccccccceeeeeee
Q psy6828 162 ------------EYTGTDQHSFLQHTYH 177 (392)
Q Consensus 162 ------------~~~~~d~~s~g~~~~~ 177 (392)
.....|+||+|+++|+
T Consensus 161 ~y~aPE~~~~~~~~~~~DvwslG~il~e 188 (321)
T cd05591 161 DYIAPEILQELEYGPSVDWWALGVLMYE 188 (321)
T ss_pred cccCHHHHcCCCCCCccceechhHHHHH
Confidence 0123499999999998
No 70
>cd05587 STKc_cPKC Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C. Serine/Threonine Kinases (STKs), Classical (or Conventional) Protein Kinase C (cPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. cPKCs contain a calcium-binding C2 region in their regulatory
Probab=99.84 E-value=3.8e-21 Score=182.87 Aligned_cols=129 Identities=19% Similarity=0.227 Sum_probs=100.5
Q ss_pred ccCCCCCcceeEEEEEEEeecCcEEEEEEcCCCCh---hHHHHHHHHHHH---------------------------HHh
Q psy6828 48 SSNPDSDFRYSAIFTPIGIYKGRIFAIKRIPKKSV---DITRAMKKELKI---------------------------DIM 97 (392)
Q Consensus 48 ~~~~lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~~---~~~~~~~~E~~~---------------------------~~l 97 (392)
..+.||+|+||.||+|.+..+++.||+|++.+... ...+.+..|..+ +++
T Consensus 4 ~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~~~~~lv~E~~ 83 (324)
T cd05587 4 FLMVLGKGSFGKVMLAERKGTDELYAIKILKKDVIIQDDDVECTMVEKRVLALPGKPPFLTQLHSCFQTMDRLYFVMEYV 83 (324)
T ss_pred EEEEEeeccCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhcCCCCceeeeEEEEEcCCEEEEEEcCC
Confidence 34569999999999999999999999999975422 233455556554 222
Q ss_pred hc--------CCcCCCHHHHHHHHHHHHHHHHHHhcCCcccccCCCCCceEEcCCceEEEeccccchhcccc--------
Q psy6828 98 EN--------EDVKLDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLVDSRWVVKLADFGLTEFKRDA-------- 161 (392)
Q Consensus 98 ~~--------~~~~l~~~~~~~i~~qi~~~l~ylH~~~iiiHrDlKp~NIll~~~~~~kl~DFGla~~~~~~-------- 161 (392)
.. ....+++..+..++.|++.||.|||++++ +||||||+|||++.++.+||+|||+++.....
T Consensus 84 ~~g~L~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~i-vH~dlkp~Nill~~~~~~kL~Dfg~~~~~~~~~~~~~~~~ 162 (324)
T cd05587 84 NGGDLMYHIQQVGKFKEPHAVFYAAEIAIGLFFLHSKGI-IYRDLKLDNVMLDAEGHIKIADFGMCKENIFGGKTTRTFC 162 (324)
T ss_pred CCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCe-EecCCCHHHeEEcCCCCEEEeecCcceecCCCCCceeeec
Confidence 21 12258999999999999999999999999 99999999999999999999999998642100
Q ss_pred ---------------ccccccccceeeeeee
Q psy6828 162 ---------------EYTGTDQHSFLQHTYH 177 (392)
Q Consensus 162 ---------------~~~~~d~~s~g~~~~~ 177 (392)
.....|+||+|+++|+
T Consensus 163 gt~~y~aPE~~~~~~~~~~~DiwslGvil~e 193 (324)
T cd05587 163 GTPDYIAPEIIAYQPYGKSVDWWAFGVLLYE 193 (324)
T ss_pred CCccccChhhhcCCCCCcccchhhhHHHHHH
Confidence 0123499999999998
No 71
>cd05575 STKc_SGK Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGKs are activated by insulin and growth factors via phosphoinositide 3-kinase and PDK1. They activate ion channels, ion carriers, and the Na-K-ATPase, as well as regulate the activity of enzymes and transcription factors. SGKs play important roles in transport, hormone release, neuroexcitability, cell pr
Probab=99.84 E-value=1.1e-20 Score=179.65 Aligned_cols=126 Identities=21% Similarity=0.264 Sum_probs=96.8
Q ss_pred CCCCcceeEEEEEEEeecCcEEEEEEcCCCCh---hHHHHHHHHHHH---------------------------HHhhc-
Q psy6828 51 PDSDFRYSAIFTPIGIYKGRIFAIKRIPKKSV---DITRAMKKELKI---------------------------DIMEN- 99 (392)
Q Consensus 51 ~lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~~---~~~~~~~~E~~~---------------------------~~l~~- 99 (392)
.||+|+||+||++.+..+|+.||+|++.+... .....+..|... +++..
T Consensus 2 ~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~~~~~l~hp~iv~~~~~~~~~~~~~lv~e~~~~g 81 (323)
T cd05575 2 VIGKGSFGKVLLAKHKADGKFYAVKVLQKKAILKKKEQKHIMAERNVLLKNVKHPFLVGLHYSFQTADKLYFVLDYVNGG 81 (323)
T ss_pred eeeeCCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhHHHHHHHHHHHHHhhCCCCCCCCeeEEEEeCCEEEEEEcCCCCC
Confidence 58999999999999999999999999975432 122334444322 22221
Q ss_pred -------CCcCCCHHHHHHHHHHHHHHHHHHhcCCcccccCCCCCceEEcCCceEEEeccccchhccccc----------
Q psy6828 100 -------EDVKLDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLVDSRWVVKLADFGLTEFKRDAE---------- 162 (392)
Q Consensus 100 -------~~~~l~~~~~~~i~~qi~~~l~ylH~~~iiiHrDlKp~NIll~~~~~~kl~DFGla~~~~~~~---------- 162 (392)
....+++..+..++.||+.||.|||++++ +||||||+|||++.++.+||+|||+++......
T Consensus 82 ~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~gi-vH~dikp~NIll~~~~~~kl~Dfg~~~~~~~~~~~~~~~~gt~ 160 (323)
T cd05575 82 ELFFHLQRERSFPEPRARFYAAEIASALGYLHSLNI-IYRDLKPENILLDSQGHVVLTDFGLCKEGIEHSKTTSTFCGTP 160 (323)
T ss_pred CHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCe-EeCCCCHHHeEECCCCcEEEeccCCCcccccCCCccccccCCh
Confidence 12268999999999999999999999999 999999999999999999999999986421110
Q ss_pred -------------cccccccceeeeeee
Q psy6828 163 -------------YTGTDQHSFLQHTYH 177 (392)
Q Consensus 163 -------------~~~~d~~s~g~~~~~ 177 (392)
....|+||+|+++|+
T Consensus 161 ~y~aPE~~~~~~~~~~~DvwslG~il~e 188 (323)
T cd05575 161 EYLAPEVLRKQPYDRTVDWWCLGAVLYE 188 (323)
T ss_pred hhcChhhhcCCCCCccccccccchhhhh
Confidence 112488888888888
No 72
>cd05586 STKc_Sck1_like Catalytic domain of Suppressor of loss of cAMP-dependent protein kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Fission yeast Suppressor of loss of cAMP-dependent protein kinase (Sck1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sck1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the Schizosaccharomyces pombe STK Sck1. Sck1 plays a role in trehalase activation triggered by glucose and a nitrogen source. Trehalase catalyzes the cleavage of the disaccharide trehalose to glucose. Trehalose, as a carbohydrate reserve and stress metabolite, plays an important role in the response of
Probab=99.83 E-value=1.3e-20 Score=179.67 Aligned_cols=125 Identities=20% Similarity=0.233 Sum_probs=95.4
Q ss_pred CCCcceeEEEEEEEeecCcEEEEEEcCCCChh---HHHHHHHHHHH-----------------------------HHhhc
Q psy6828 52 DSDFRYSAIFTPIGIYKGRIFAIKRIPKKSVD---ITRAMKKELKI-----------------------------DIMEN 99 (392)
Q Consensus 52 lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~~~---~~~~~~~E~~~-----------------------------~~l~~ 99 (392)
||+|+||+||++.+..+++.||+|++.+.... .......|..+ +|+..
T Consensus 1 lG~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~p~i~~~~~~~~~~~~~~lv~e~~~~ 80 (330)
T cd05586 1 IGKGTFGQVYQVRKKDTRRIYAMKVLSKKEIVAKKEVAHTIGERNILVRTLLDESPFIVGLKFSFQTDSDLYLVTDYMSG 80 (330)
T ss_pred CCCCCceEEEEEEECCCCCEEEEEEEeHHHHhhhhHHHHHHHHHHHHHHhccCCCCcCcceEEEEecCCeEEEEEcCCCC
Confidence 69999999999999999999999999754321 11222223222 22211
Q ss_pred --------CCcCCCHHHHHHHHHHHHHHHHHHhcCCcccccCCCCCceEEcCCceEEEeccccchhcccc----------
Q psy6828 100 --------EDVKLDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLVDSRWVVKLADFGLTEFKRDA---------- 161 (392)
Q Consensus 100 --------~~~~l~~~~~~~i~~qi~~~l~ylH~~~iiiHrDlKp~NIll~~~~~~kl~DFGla~~~~~~---------- 161 (392)
....+++..+..++.||+.||.|||++++ +||||||+|||++.++.+||+|||+++.....
T Consensus 81 g~L~~~l~~~~~~~~~~~~~~~~qil~al~~LH~~~i-vHrDlkp~Nili~~~~~~kl~Dfg~a~~~~~~~~~~~~~~gt 159 (330)
T cd05586 81 GELFWHLQKEGRFSEDRAKFYIAELVLALEHLHKYDI-VYRDLKPENILLDATGHIALCDFGLSKANLTDNKTTNTFCGT 159 (330)
T ss_pred ChHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCe-EeccCCHHHeEECCCCCEEEecCCcCcCCCCCCCCccCccCC
Confidence 12358999999999999999999999999 99999999999999999999999998642110
Q ss_pred --------------ccccccccceeeeeee
Q psy6828 162 --------------EYTGTDQHSFLQHTYH 177 (392)
Q Consensus 162 --------------~~~~~d~~s~g~~~~~ 177 (392)
.....|+||+|+++|+
T Consensus 160 ~~y~aPE~~~~~~~~~~~~DvwslGvil~e 189 (330)
T cd05586 160 TEYLAPEVLLDEKGYTKHVDFWSLGVLVFE 189 (330)
T ss_pred ccccCHHHHcCCCCCCCccceeccccEEEE
Confidence 0122489999999888
No 73
>KOG0604|consensus
Probab=99.83 E-value=4.3e-21 Score=170.55 Aligned_cols=129 Identities=19% Similarity=0.222 Sum_probs=104.0
Q ss_pred ceeeeccCCCCCcceeEEEEEEEeecCcEEEEEEcCCCChhHHHHHHHHHHH----------------------------
Q psy6828 43 SQVSLSSNPDSDFRYSAIFTPIGIYKGRIFAIKRIPKKSVDITRAMKKELKI---------------------------- 94 (392)
Q Consensus 43 ~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~~~~~~~~~~E~~~---------------------------- 94 (392)
.+..+....||-|-.|+|..|.++.+|+++|+|++... ...++|++.
T Consensus 61 edY~is~qvLG~GinGkV~~C~~k~T~ekfALKvL~Ds-----~KARrEVeLHw~~s~h~~iV~IidVyeNs~~~rkcLL 135 (400)
T KOG0604|consen 61 EDYSISWQVLGAGINGKVVQCVHKRTQEKFALKVLLDS-----PKARREVELHWMASGHPHIVSIIDVYENSYQGRKCLL 135 (400)
T ss_pred hhheehhhhhccccCCceEEEEeccchhhhHHHHHhcC-----HHHHhHhhhhhhhcCCCceEEeehhhhhhccCceeeE
Confidence 34455566799999999999999999999999998644 334556555
Q ss_pred -------------HHhhcCCcCCCHHHHHHHHHHHHHHHHHHhcCCcccccCCCCCceEEcC---CceEEEeccccchhc
Q psy6828 95 -------------DIMENEDVKLDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLVDS---RWVVKLADFGLTEFK 158 (392)
Q Consensus 95 -------------~~l~~~~~~l~~~~~~~i~~qi~~~l~ylH~~~iiiHrDlKp~NIll~~---~~~~kl~DFGla~~~ 158 (392)
.+-++++..|+|.++..|++||+.|+.|||+.+| .||||||+|+|... +..+||+|||+|+..
T Consensus 136 iVmE~meGGeLfsriq~~g~~afTErea~eI~~qI~~Av~~lH~~nI-AHRDlKpENLLyt~t~~na~lKLtDfGFAK~t 214 (400)
T KOG0604|consen 136 IVMECMEGGELFSRIQDRGDQAFTEREASEIMKQIGLAVRYLHSMNI-AHRDLKPENLLYTTTSPNAPLKLTDFGFAKET 214 (400)
T ss_pred eeeecccchHHHHHHHHcccccchHHHHHHHHHHHHHHHHHHHhcch-hhccCChhheeeecCCCCcceEeccccccccc
Confidence 2222345569999999999999999999999999 99999999999964 456999999999976
Q ss_pred cccccc----------------------cccccceeeeeee
Q psy6828 159 RDAEYT----------------------GTDQHSFLQHTYH 177 (392)
Q Consensus 159 ~~~~~~----------------------~~d~~s~g~~~~~ 177 (392)
...... ..|+||+|+++|.
T Consensus 215 ~~~~~L~TPc~TPyYvaPevlg~eKydkscdmwSlgVimYI 255 (400)
T KOG0604|consen 215 QEPGDLMTPCFTPYYVAPEVLGPEKYDKSCDMWSLGVIMYI 255 (400)
T ss_pred CCCccccCCcccccccCHHHhCchhcCCCCCccchhHHHHH
Confidence 532211 2399999999998
No 74
>cd05573 STKc_ROCK_NDR_like Catalytic domain of ROCK- and NDR kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) and Nuclear Dbf2-Related (NDR)-like kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK- and NDR-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include ROCK and ROCK-like proteins such as DMPK, MRCK, and CRIK, as well as NDR and NDR-like proteins such as LATS, CBK1 and Sid2p. ROCK and CRIK are effectors of the small GTPase Rho, while MRCK is an effector of the small GTPase Cdc42. NDR and NDR-like kinases contain an N-terminal regulatory (NTR) domain and an insert within the
Probab=99.83 E-value=7.5e-21 Score=182.56 Aligned_cols=112 Identities=18% Similarity=0.261 Sum_probs=92.3
Q ss_pred eeccCCCCCcceeEEEEEEEeecCcEEEEEEcCCCCh---hHHHHHHHHHHH----------------------------
Q psy6828 46 SLSSNPDSDFRYSAIFTPIGIYKGRIFAIKRIPKKSV---DITRAMKKELKI---------------------------- 94 (392)
Q Consensus 46 ~~~~~~lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~~---~~~~~~~~E~~~---------------------------- 94 (392)
|...+.||+|+||.||++.+..+++.||||++++... .....+..|+.+
T Consensus 3 y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~e~ 82 (350)
T cd05573 3 FEVIKVIGRGAFGEVWLVRDKDTGQVYAMKVLRKSDMIKRNQIAHVRAERDILADADSPWIVKLYYSFQDEEHLYLVMEY 82 (350)
T ss_pred ceEEEEEEeCCcEEEEEEEECCCCCEEEEEEEEHHHHhhccHHHHHHHHHHHHHhcCCCCccchhhheecCCeEEEEEcC
Confidence 3445679999999999999999999999999975432 233456666655
Q ss_pred -------HHhhcCCcCCCHHHHHHHHHHHHHHHHHHhcCCcccccCCCCCceEEcCCceEEEeccccchhcc
Q psy6828 95 -------DIMENEDVKLDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLVDSRWVVKLADFGLTEFKR 159 (392)
Q Consensus 95 -------~~l~~~~~~l~~~~~~~i~~qi~~~l~ylH~~~iiiHrDlKp~NIll~~~~~~kl~DFGla~~~~ 159 (392)
+++... ..+++..+..++.|++.||.|||++++ +||||||+|||++.++.+||+|||++....
T Consensus 83 ~~~~~L~~~l~~~-~~l~~~~~~~i~~qi~~aL~~LH~~gi-iH~Dlkp~NIll~~~~~~kL~Dfg~~~~~~ 152 (350)
T cd05573 83 MPGGDLMNLLIRK-DVFPEETARFYIAELVLALDSVHKLGF-IHRDIKPDNILIDADGHIKLADFGLCKKMN 152 (350)
T ss_pred CCCCCHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHHCCe-eccCCCHHHeEECCCCCEEeecCCCCccCc
Confidence 222222 368999999999999999999999999 999999999999999999999999987654
No 75
>cd05604 STKc_SGK3 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 3. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGK3 is expressed in most tissues and is most abundant in the embryo and adult heart and spleen. It was originally discovered in a screen for antiapoptotic genes. It phosphorylates and inhibits the proapoptotic proteins, Bad and FKHRL1. SGK3 also regulates many transporters, ion channels,
Probab=99.83 E-value=1.4e-20 Score=178.98 Aligned_cols=126 Identities=21% Similarity=0.258 Sum_probs=98.0
Q ss_pred CCCCcceeEEEEEEEeecCcEEEEEEcCCCCh---hHHHHHHHHHHH---------------------------HHhhc-
Q psy6828 51 PDSDFRYSAIFTPIGIYKGRIFAIKRIPKKSV---DITRAMKKELKI---------------------------DIMEN- 99 (392)
Q Consensus 51 ~lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~~---~~~~~~~~E~~~---------------------------~~l~~- 99 (392)
.||+|+||+||++.+..+|+.||+|++.+... .....+..|... +++..
T Consensus 2 ~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~l~~~~hp~iv~~~~~~~~~~~~~lv~e~~~~~ 81 (325)
T cd05604 2 VIGKGSFGKVLLAKRKLDGKCYAVKVLQKKIVLNRKEQKHIMAERNVLLKNVKHPFLVGLHYSFQTTEKLYFVLDFVNGG 81 (325)
T ss_pred ceeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHHhCCCCCCccEEEEEecCCEEEEEEcCCCCC
Confidence 58999999999999999999999999975422 222334444322 22221
Q ss_pred -------CCcCCCHHHHHHHHHHHHHHHHHHhcCCcccccCCCCCceEEcCCceEEEeccccchhccccc----------
Q psy6828 100 -------EDVKLDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLVDSRWVVKLADFGLTEFKRDAE---------- 162 (392)
Q Consensus 100 -------~~~~l~~~~~~~i~~qi~~~l~ylH~~~iiiHrDlKp~NIll~~~~~~kl~DFGla~~~~~~~---------- 162 (392)
....+++..+..++.||+.||.|||++++ +||||||+|||++.++.+||+|||+++......
T Consensus 82 ~L~~~l~~~~~~~~~~~~~~~~qi~~al~~lH~~gi-vH~Dlkp~NIll~~~~~~kL~DfG~~~~~~~~~~~~~~~~gt~ 160 (325)
T cd05604 82 ELFFHLQRERSFPEPRARFYAAEIASALGYLHSINI-VYRDLKPENILLDSQGHVVLTDFGLCKEGIAQSDTTTTFCGTP 160 (325)
T ss_pred CHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCe-eecCCCHHHeEECCCCCEEEeecCCcccCCCCCCCcccccCCh
Confidence 22368999999999999999999999999 999999999999999999999999987421110
Q ss_pred -------------cccccccceeeeeee
Q psy6828 163 -------------YTGTDQHSFLQHTYH 177 (392)
Q Consensus 163 -------------~~~~d~~s~g~~~~~ 177 (392)
....|+||+|+++|+
T Consensus 161 ~y~aPE~~~~~~~~~~~DvwslG~il~e 188 (325)
T cd05604 161 EYLAPEVIRKQPYDNTVDWWCLGAVLYE 188 (325)
T ss_pred hhCCHHHHcCCCCCCcCccccccceehh
Confidence 123499999999998
No 76
>cd05602 STKc_SGK1 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 1. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK1 is ubiquitously expressed and is under transcriptional control of numerous stimuli including cell stress (cell shrinkage), serum, hormones (gluco- and mineralocorticoids), gonadotropins, growth factors, interleukin-6, and other cytokines. It plays roles in sodium retention and potassium elimination in the kidney, nutrient transport, salt
Probab=99.83 E-value=9.4e-21 Score=180.22 Aligned_cols=126 Identities=19% Similarity=0.237 Sum_probs=96.5
Q ss_pred CCCCcceeEEEEEEEeecCcEEEEEEcCCCCh---hHHHHHHHHHHH---------------------------HHhhc-
Q psy6828 51 PDSDFRYSAIFTPIGIYKGRIFAIKRIPKKSV---DITRAMKKELKI---------------------------DIMEN- 99 (392)
Q Consensus 51 ~lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~~---~~~~~~~~E~~~---------------------------~~l~~- 99 (392)
.||+|+||+||++.+..+++.||+|++.+... .....+..|... +++..
T Consensus 2 ~lg~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~l~~~~h~~Iv~~~~~~~~~~~~~lv~e~~~~~ 81 (325)
T cd05602 2 VIGKGSFGKVLLARHKAEEKFYAVKVLQKKAILKKKEEKHIMSERNVLLKNVKHPFLVGLHFSFQTADKLYFVLDYINGG 81 (325)
T ss_pred eeeeCCCeEEEEEEECCCCCEEEEEEEEHHHHHhhhHHHHHHHHHHHHHHhCCCCCCCceeEEEEcCCeEEEEEeCCCCC
Confidence 58999999999999999999999999975432 112233333221 22211
Q ss_pred -------CCcCCCHHHHHHHHHHHHHHHHHHhcCCcccccCCCCCceEEcCCceEEEeccccchhccccc----------
Q psy6828 100 -------EDVKLDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLVDSRWVVKLADFGLTEFKRDAE---------- 162 (392)
Q Consensus 100 -------~~~~l~~~~~~~i~~qi~~~l~ylH~~~iiiHrDlKp~NIll~~~~~~kl~DFGla~~~~~~~---------- 162 (392)
....+++..+..++.||+.||.|||++++ +||||||+|||++.++.+||+|||+++......
T Consensus 82 ~L~~~~~~~~~~~~~~~~~~~~qi~~~L~~lH~~gi-iHrDlkp~Nili~~~~~~kl~DfG~a~~~~~~~~~~~~~~gt~ 160 (325)
T cd05602 82 ELFYHLQRERCFLEPRARFYAAEIASALGYLHSLNI-VYRDLKPENILLDSQGHIVLTDFGLCKENIEHNGTTSTFCGTP 160 (325)
T ss_pred cHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCe-EecCCCHHHeEECCCCCEEEccCCCCcccccCCCCcccccCCc
Confidence 12258889999999999999999999999 999999999999999999999999987431110
Q ss_pred -------------cccccccceeeeeee
Q psy6828 163 -------------YTGTDQHSFLQHTYH 177 (392)
Q Consensus 163 -------------~~~~d~~s~g~~~~~ 177 (392)
....|+||+|+++|+
T Consensus 161 ~y~aPE~~~~~~~~~~~DiwslG~il~e 188 (325)
T cd05602 161 EYLAPEVLHKQPYDRTVDWWCLGAVLYE 188 (325)
T ss_pred cccCHHHHcCCCCCCccccccccHHHHH
Confidence 113499999999998
No 77
>KOG0577|consensus
Probab=99.83 E-value=4e-21 Score=184.18 Aligned_cols=150 Identities=22% Similarity=0.311 Sum_probs=120.2
Q ss_pred eccccceeeeeeccccccccceeeeccCCCCCcceeEEEEEEEeecCcEEEEEEcCCCCh---hHHHHHHHHHHH-----
Q psy6828 23 LVDNHKLFDWFCSWFQNVHTSQVSLSSNPDSDFRYSAIFTPIGIYKGRIFAIKRIPKKSV---DITRAMKKELKI----- 94 (392)
Q Consensus 23 ~l~hpniv~~~~~~~~~~~~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~~---~~~~~~~~E~~~----- 94 (392)
.|+.|.|-.. +....+.++|.+.+.||-|+||.||-+++..+.+.||||+++-... .....+.+|+..
T Consensus 9 slKDPeiA~L----F~k~DPEklf~dLrEIGHGSFGAVYfArd~~n~evVAIKKMsySGKQs~EKWqDIlKEVrFL~~l~ 84 (948)
T KOG0577|consen 9 SLKDPEIADL----FFKDDPEKLFSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDILKEVRFLRQLR 84 (948)
T ss_pred CCCCchHHHH----HccCCHHHHHHHHHHhcCCccceeEEeeccCccceeeeeeccccccccHHHHHHHHHHHHHHHhcc
Confidence 4556665322 2223356778889999999999999999999999999999986544 344556777766
Q ss_pred -----------------------------HHhhcCCcCCCHHHHHHHHHHHHHHHHHHhcCCcccccCCCCCceEEcCCc
Q psy6828 95 -----------------------------DIMENEDVKLDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLVDSRW 145 (392)
Q Consensus 95 -----------------------------~~l~~~~~~l~~~~~~~i~~qi~~~l~ylH~~~iiiHrDlKp~NIll~~~~ 145 (392)
|+++-...++.+-++..|+.+.+.||.||||.+. ||||||..||||++.|
T Consensus 85 HPntieYkgCyLre~TaWLVMEYClGSAsDlleVhkKplqEvEIAAi~~gaL~gLaYLHS~~~-IHRDiKAGNILLse~g 163 (948)
T KOG0577|consen 85 HPNTIEYKGCYLREHTAWLVMEYCLGSASDLLEVHKKPLQEVEIAAITHGALQGLAYLHSHNR-IHRDIKAGNILLSEPG 163 (948)
T ss_pred CCCcccccceeeccchHHHHHHHHhccHHHHHHHHhccchHHHHHHHHHHHHHHHHHHHHhhH-HhhhccccceEecCCC
Confidence 5555556689999999999999999999999999 9999999999999999
Q ss_pred eEEEeccccchhcccccc----------------------ccccccceeeeeee
Q psy6828 146 VVKLADFGLTEFKRDAEY----------------------TGTDQHSFLQHTYH 177 (392)
Q Consensus 146 ~~kl~DFGla~~~~~~~~----------------------~~~d~~s~g~~~~~ 177 (392)
.+||+|||.+....+... ...|+||+|+++.|
T Consensus 164 ~VKLaDFGSAsi~~PAnsFvGTPywMAPEVILAMDEGqYdgkvDvWSLGITCIE 217 (948)
T KOG0577|consen 164 LVKLADFGSASIMAPANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIE 217 (948)
T ss_pred eeeeccccchhhcCchhcccCCccccchhHheeccccccCCccceeeccchhhh
Confidence 999999999876543221 12389999999888
No 78
>cd05600 STKc_Sid2p_Dbf2p Catalytic domain of Fungal Sid2p- and Dbf2p-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), ROCK- and NDR-like subfamily, fungal Sid2p- and Dbf2p-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sid2p- and Dbf2p-like group is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group contains fungal kinases including Schizosaccharomyces pombe Sid2p and Saccharomyces cerevisiae Dbf2p. Group members show similarity to NDR kinases in that they contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Sid2p plays a crucial role in the septum initiation network (SIN) and in the initiation of cytokinesis.
Probab=99.83 E-value=9.9e-21 Score=180.65 Aligned_cols=130 Identities=24% Similarity=0.253 Sum_probs=103.4
Q ss_pred eeccCCCCCcceeEEEEEEEeecCcEEEEEEcCCCCh---hHHHHHHHHHHH----------------------------
Q psy6828 46 SLSSNPDSDFRYSAIFTPIGIYKGRIFAIKRIPKKSV---DITRAMKKELKI---------------------------- 94 (392)
Q Consensus 46 ~~~~~~lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~~---~~~~~~~~E~~~---------------------------- 94 (392)
|...+.||+|+||.||+|.+..+++.||||++.+... ...+.+.+|+.+
T Consensus 3 y~~~~~ig~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~iv~~~~~~~~~~~~~lv~e~ 82 (333)
T cd05600 3 FQILTQVGQGGYGQVFLAKKKDTGEIVALKRMKKSLLFKLNEVRHVLTERDILTTTKSEWLVKLLYAFQDDEYLYLAMEY 82 (333)
T ss_pred cEEEEEEeecCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhHHHHHHHHHHHHHhCCCCCCccEEEEEEcCCEEEEEEeC
Confidence 3345679999999999999999999999999975432 334556677666
Q ss_pred -------HHhhcCCcCCCHHHHHHHHHHHHHHHHHHhcCCcccccCCCCCceEEcCCceEEEeccccchhccccc-----
Q psy6828 95 -------DIMENEDVKLDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLVDSRWVVKLADFGLTEFKRDAE----- 162 (392)
Q Consensus 95 -------~~l~~~~~~l~~~~~~~i~~qi~~~l~ylH~~~iiiHrDlKp~NIll~~~~~~kl~DFGla~~~~~~~----- 162 (392)
+++... ..+++..+..++.|++.||.|||++++ +||||||+|||++.++.+||+|||+++......
T Consensus 83 ~~g~~L~~~l~~~-~~l~~~~~~~~~~qi~~~l~~lH~~~i-vH~dlkp~Nil~~~~~~~kL~Dfg~a~~~~~~~~~~~g 160 (333)
T cd05600 83 VPGGDFRTLLNNL-GVLSEDHARFYMAEMFEAVDALHELGY-IHRDLKPENFLIDASGHIKLTDFGLSKGIVTYANSVVG 160 (333)
T ss_pred CCCCCHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHHCCc-cccCCCHHHEEECCCCCEEEEeCcCCcccccccCCccc
Confidence 233222 258999999999999999999999999 999999999999999999999999987543210
Q ss_pred ---------------cccccccceeeeeee
Q psy6828 163 ---------------YTGTDQHSFLQHTYH 177 (392)
Q Consensus 163 ---------------~~~~d~~s~g~~~~~ 177 (392)
....|+||+|+++|+
T Consensus 161 t~~y~aPE~~~~~~~~~~~DvwslG~il~e 190 (333)
T cd05600 161 SPDYMAPEVLRGKGYDFTVDYWSLGCMLYE 190 (333)
T ss_pred CccccChhHhcCCCCCCccceecchHHHhh
Confidence 123488888888887
No 79
>KOG0984|consensus
Probab=99.83 E-value=8.2e-21 Score=160.62 Aligned_cols=137 Identities=19% Similarity=0.262 Sum_probs=108.8
Q ss_pred ccCCCCCcceeEEEEEEEeecCcEEEEEEcCCCCh-hHHHHHHHHHHH--------------------------------
Q psy6828 48 SSNPDSDFRYSAIFTPIGIYKGRIFAIKRIPKKSV-DITRAMKKELKI-------------------------------- 94 (392)
Q Consensus 48 ~~~~lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~~-~~~~~~~~E~~~-------------------------------- 94 (392)
....||+|+||.|-+-++..+|+..|+|.+...-. +..++..+|+.+
T Consensus 50 ~i~elGrGayG~vekmrh~~sg~imAvKri~~tvn~q~q~r~L~dldi~~r~~~CPf~V~FyGa~~regdvwIcME~M~t 129 (282)
T KOG0984|consen 50 GIEELGRGAYGVVEKMRHIQSGTIMAVKRIRATVNSQEQKRLLMDLDIIMRTVDCPFTVHFYGALFREGDVWICMELMDT 129 (282)
T ss_pred hhhhhcCCccchhhheeeccCCeEEEEeeehhhcChHHHHHHHHhhhhhccCCCCCeEEEeehhhhccccEEEeHHHhhh
Confidence 36679999999999999999999999999975432 456678888887
Q ss_pred -------HHhhcCCcCCCHHHHHHHHHHHHHHHHHHhcCCcccccCCCCCceEEcCCceEEEeccccchhcccccc----
Q psy6828 95 -------DIMENEDVKLDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLVDSRWVVKLADFGLTEFKRDAEY---- 163 (392)
Q Consensus 95 -------~~l~~~~~~l~~~~~~~i~~qi~~~l~ylH~~~iiiHrDlKp~NIll~~~~~~kl~DFGla~~~~~~~~---- 163 (392)
+.++.+ ..++|..+-+|+..+..||.|||++=-+||||+||+|||++.+|++|+||||+|..+.++.-
T Consensus 130 Sldkfy~~v~~~g-~~ipE~vlGkIa~Svv~al~~L~~kL~vIHRDvKPsNiLIn~~GqVKiCDFGIsG~L~dSiAkt~d 208 (282)
T KOG0984|consen 130 SLDKFYRKVLKKG-GTIPEDVLGKIAVSVVHALEFLHSKLSVIHRDVKPSNILINYDGQVKICDFGISGYLVDSIAKTMD 208 (282)
T ss_pred hHHHHHHHHHhcC-CcCchHHhhHhHHHHHHHHHHHHHHhhhhhccCCcceEEEccCCcEEEcccccceeehhhhHHHHh
Confidence 223333 36899999999999999999999864339999999999999999999999999876533211
Q ss_pred ----------------------ccccccceeeeeee--ccCCCCcc
Q psy6828 164 ----------------------TGTDQHSFLQHTYH--VNRAGSTE 185 (392)
Q Consensus 164 ----------------------~~~d~~s~g~~~~~--~~~~~~~~ 185 (392)
..+|+||+|+.+.| ...|++..
T Consensus 209 aGCkpYmaPEri~~e~n~~gY~vksDvWSLGItmiElA~lr~PY~~ 254 (282)
T KOG0984|consen 209 AGCKPYMAPERINPELNQKGYSVKSDVWSLGITMIEMAILRFPYES 254 (282)
T ss_pred cCCCccCChhhcCcccCcccceeehhhhhhhhhhhhhhhccccccc
Confidence 12399999999998 44455443
No 80
>KOG0201|consensus
Probab=99.83 E-value=2.5e-20 Score=173.55 Aligned_cols=149 Identities=19% Similarity=0.250 Sum_probs=111.3
Q ss_pred ceeeeccCCCCCcceeEEEEEEEeecCcEEEEEEcCCCCh-hHHHHHHHHHHH--------------------------H
Q psy6828 43 SQVSLSSNPDSDFRYSAIFTPIGIYKGRIFAIKRIPKKSV-DITRAMKKELKI--------------------------D 95 (392)
Q Consensus 43 ~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~~-~~~~~~~~E~~~--------------------------~ 95 (392)
...|.....+|+|+||.||+|.+..+++.||||+++.... ...+.+++|+.+ +
T Consensus 12 ~~~~~~~~~IgrGsfG~Vyk~~d~~t~k~vAiKii~Le~~~deIediqqei~~Ls~~~~~~it~yygsyl~g~~LwiiMe 91 (467)
T KOG0201|consen 12 ELLYTKLELIGRGSFGEVYKAIDNKTKKVVAIKIIDLEEAEDEIEDIQQEISVLSQCDSPNITEYYGSYLKGTKLWIIME 91 (467)
T ss_pred ccccccchhccccccceeeeeeeccccceEEEEEechhhcchhhHHHHHHHHHHHhcCcchHHhhhhheeecccHHHHHH
Confidence 4455566889999999999999999999999999976543 345566677666 2
Q ss_pred Hhh---------cCCcCCCHHHHHHHHHHHHHHHHHHhcCCcccccCCCCCceEEcCCceEEEeccccchhccccccccc
Q psy6828 96 IME---------NEDVKLDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLVDSRWVVKLADFGLTEFKRDAEYTGT 166 (392)
Q Consensus 96 ~l~---------~~~~~l~~~~~~~i~~qi~~~l~ylH~~~iiiHrDlKp~NIll~~~~~~kl~DFGla~~~~~~~~~~~ 166 (392)
|+. .+. .+++.++..++++++.||.|||+++. +|||||+.|||+..+|.+|++|||.+...+......
T Consensus 92 y~~gGsv~~lL~~~~-~~~E~~i~~ilre~l~~l~ylH~~~k-iHrDIKaanil~s~~g~vkl~DfgVa~ql~~~~~rr- 168 (467)
T KOG0201|consen 92 YCGGGSVLDLLKSGN-ILDEFEIAVILREVLKGLDYLHSEKK-IHRDIKAANILLSESGDVKLADFGVAGQLTNTVKRR- 168 (467)
T ss_pred HhcCcchhhhhccCC-CCccceeeeehHHHHHHhhhhhhcce-ecccccccceeEeccCcEEEEecceeeeeechhhcc-
Confidence 222 222 35888999999999999999999999 999999999999999999999999998776544332
Q ss_pred cccceeeeeeeccC----CCCcccccccccchh
Q psy6828 167 DQHSFLQHTYHVNR----AGSTESLHCKCDEAL 195 (392)
Q Consensus 167 d~~s~g~~~~~~~~----~~~~~~~d~~~~~~l 195 (392)
...+|++.||+|| ..+..+.|+|.++..
T Consensus 169 -~tfvGTPfwMAPEVI~~~~Y~~KADIWSLGIT 200 (467)
T KOG0201|consen 169 -KTFVGTPFWMAPEVIKQSGYDTKADIWSLGIT 200 (467)
T ss_pred -ccccccccccchhhhccccccchhhhhhhhHH
Confidence 2224555555544 234445555555433
No 81
>PTZ00036 glycogen synthase kinase; Provisional
Probab=99.83 E-value=1.8e-20 Score=185.47 Aligned_cols=130 Identities=22% Similarity=0.271 Sum_probs=98.7
Q ss_pred ceeeeccCCCCCcceeEEEEEEEeecCcEEEEEEcCCCChhHHHHHHHHHHH----------------------------
Q psy6828 43 SQVSLSSNPDSDFRYSAIFTPIGIYKGRIFAIKRIPKKSVDITRAMKKELKI---------------------------- 94 (392)
Q Consensus 43 ~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~~~~~~~~~~E~~~---------------------------- 94 (392)
...|...+.||+|+||.||+|.+..+++.||||++...... ..+|+.+
T Consensus 65 ~~~y~~~~~LG~G~fg~Vy~~~~~~~~~~vAiK~i~~~~~~----~~~Ei~il~~l~h~niv~l~~~~~~~~~~~~~~~~ 140 (440)
T PTZ00036 65 NKSYKLGNIIGNGSFGVVYEAICIDTSEKVAIKKVLQDPQY----KNRELLIMKNLNHINIIFLKDYYYTECFKKNEKNI 140 (440)
T ss_pred CCeEEEeEEEEeCCCEEEEEEEECCCCCEEEEEEEecCcch----HHHHHHHHHhcCCCCCcceeeeEeecccccCCCce
Confidence 34577788999999999999999999999999988654321 1223333
Q ss_pred --------------HHhh---cCCcCCCHHHHHHHHHHHHHHHHHHhcCCcccccCCCCCceEEcCCc-eEEEeccccch
Q psy6828 95 --------------DIME---NEDVKLDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLVDSRW-VVKLADFGLTE 156 (392)
Q Consensus 95 --------------~~l~---~~~~~l~~~~~~~i~~qi~~~l~ylH~~~iiiHrDlKp~NIll~~~~-~~kl~DFGla~ 156 (392)
+++. .....+++..+..++.|++.||.|||++++ +||||||+|||++.++ .+||+|||+|+
T Consensus 141 ~l~lvmE~~~~~l~~~~~~~~~~~~~l~~~~~~~~~~qi~~gL~yLH~~~I-iHrDLKp~NILl~~~~~~vkL~DFGla~ 219 (440)
T PTZ00036 141 FLNVVMEFIPQTVHKYMKHYARNNHALPLFLVKLYSYQLCRALAYIHSKFI-CHRDLKPQNLLIDPNTHTLKLCDFGSAK 219 (440)
T ss_pred EEEEEEecCCccHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCE-ecCCcCHHHEEEcCCCCceeeeccccch
Confidence 1111 123358888999999999999999999999 9999999999998664 69999999997
Q ss_pred hccccc-----------------------cccccccceeeeeee
Q psy6828 157 FKRDAE-----------------------YTGTDQHSFLQHTYH 177 (392)
Q Consensus 157 ~~~~~~-----------------------~~~~d~~s~g~~~~~ 177 (392)
...... ....|+||+|+++|+
T Consensus 220 ~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlGvil~e 263 (440)
T PTZ00036 220 NLLAGQRSVSYICSRFYRAPELMLGATNYTTHIDLWSLGCIIAE 263 (440)
T ss_pred hccCCCCcccCCCCcCccCHHHhcCCCCCCcHHHHHHHHHHHHH
Confidence 543211 112388888888887
No 82
>KOG1187|consensus
Probab=99.83 E-value=1.2e-20 Score=180.54 Aligned_cols=114 Identities=27% Similarity=0.440 Sum_probs=93.1
Q ss_pred eeccCCCCCcceeEEEEEEEeecCcEEEEEEcCCCChhHHHHHHHHHHH---------------------------HHhh
Q psy6828 46 SLSSNPDSDFRYSAIFTPIGIYKGRIFAIKRIPKKSVDITRAMKKELKI---------------------------DIME 98 (392)
Q Consensus 46 ~~~~~~lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~~~~~~~~~~E~~~---------------------------~~l~ 98 (392)
+-..+.+|+|+||.||+|. ..+|+.||||++.....+...+|.+|+.+ +|+.
T Consensus 77 Fs~~~~ig~Ggfg~VYkG~-l~~~~~vAVK~~~~~~~~~~~eF~~Ei~~ls~l~H~Nlv~LlGyC~e~~~~~~LVYEym~ 155 (361)
T KOG1187|consen 77 FSESNLIGEGGFGTVYKGV-LSDGTVVAVKRLSSNSGQGEREFLNEVEILSRLRHPNLVKLLGYCLEGGEHRLLVYEYMP 155 (361)
T ss_pred CchhcceecCCCeEEEEEE-ECCCCEEEEEEecCCCCcchhHHHHHHHHHhcCCCcCcccEEEEEecCCceEEEEEEccC
Confidence 3345789999999999998 44559999998876654313459999998 4444
Q ss_pred cCCc----------CCCHHHHHHHHHHHHHHHHHHhcCC--cccccCCCCCceEEcCCceEEEeccccchhccc
Q psy6828 99 NEDV----------KLDNMFIASLVADILRGMLYLHDSA--LRYHGNLKASNCLVDSRWVVKLADFGLTEFKRD 160 (392)
Q Consensus 99 ~~~~----------~l~~~~~~~i~~qi~~~l~ylH~~~--iiiHrDlKp~NIll~~~~~~kl~DFGla~~~~~ 160 (392)
++++ .++|....+|+.+++.||.|||+.. .|+||||||+|||||+++++||+|||+|+....
T Consensus 156 nGsL~d~L~~~~~~~L~W~~R~kIa~g~A~gL~yLH~~~~~~iiHrDiKssNILLD~~~~aKlsDFGLa~~~~~ 229 (361)
T KOG1187|consen 156 NGSLEDHLHGKKGEPLDWETRLKIALGAARGLAYLHEGCPPPIIHRDIKSSNILLDEDFNAKLSDFGLAKLGPE 229 (361)
T ss_pred CCCHHHHhCCCCCCCCCHHHHHHHHHHHHHHHHHHccCCCCCEecCCCCHHHeeECCCCCEEccCccCcccCCc
Confidence 4332 7899999999999999999999854 249999999999999999999999999976654
No 83
>cd05603 STKc_SGK2 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 2. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK2 shows a more restricted distribution that SGK1 and is most abundantly expressed in epithelial tissues including kidney, liver, pancreas, and the choroid plexus of the brain. In vitro cellular assays show that SGK2 can stimulate the activity of ion channels, the glutamate transporter EEAT4, and the glutamate receptors, GluR6 and GLUR1.
Probab=99.83 E-value=1.7e-20 Score=178.08 Aligned_cols=126 Identities=21% Similarity=0.246 Sum_probs=96.8
Q ss_pred CCCCcceeEEEEEEEeecCcEEEEEEcCCCCh---hHHHHHHHHHHH---------------------------HHhhc-
Q psy6828 51 PDSDFRYSAIFTPIGIYKGRIFAIKRIPKKSV---DITRAMKKELKI---------------------------DIMEN- 99 (392)
Q Consensus 51 ~lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~~---~~~~~~~~E~~~---------------------------~~l~~- 99 (392)
.||+|+||.||++.+..+++.||+|.+.+... .....+..|... +++..
T Consensus 2 ~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~l~~~~h~~iv~~~~~~~~~~~~~lv~e~~~~~ 81 (321)
T cd05603 2 VIGKGSFGKVLLAKRKSDGSFYAVKVLQKKTILKKKEQNHIMAERNVLLKNLKHPFLVGLHYSFQTAEKLYFVLDYVNGG 81 (321)
T ss_pred eeeeCCCEEEEEEEECCCCCEEEEEEEEHHHHHHhhHHHHHHHHHHHHHHhCCCCCccceeeEEEcCCEEEEEEcCCCCC
Confidence 58999999999999999999999999975432 222334444322 22221
Q ss_pred -------CCcCCCHHHHHHHHHHHHHHHHHHhcCCcccccCCCCCceEEcCCceEEEeccccchhccccc----------
Q psy6828 100 -------EDVKLDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLVDSRWVVKLADFGLTEFKRDAE---------- 162 (392)
Q Consensus 100 -------~~~~l~~~~~~~i~~qi~~~l~ylH~~~iiiHrDlKp~NIll~~~~~~kl~DFGla~~~~~~~---------- 162 (392)
....+++..+..++.||+.||.|||++++ +||||||+||+++.++.+||+|||+++......
T Consensus 82 ~L~~~l~~~~~~~~~~~~~~~~qi~~~L~~lH~~~i-vH~Dlkp~NIll~~~~~~kl~Dfg~~~~~~~~~~~~~~~~gt~ 160 (321)
T cd05603 82 ELFFHLQRERCFLEPRARFYAAEVASAIGYLHSLNI-IYRDLKPENILLDSQGHVVLTDFGLCKEGVEPEETTSTFCGTP 160 (321)
T ss_pred CHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCe-EeccCCHHHeEECCCCCEEEccCCCCccCCCCCCccccccCCc
Confidence 12358899999999999999999999999 999999999999999999999999987421110
Q ss_pred -------------cccccccceeeeeee
Q psy6828 163 -------------YTGTDQHSFLQHTYH 177 (392)
Q Consensus 163 -------------~~~~d~~s~g~~~~~ 177 (392)
....|+||+|+++|+
T Consensus 161 ~y~aPE~~~~~~~~~~~DiwslG~il~e 188 (321)
T cd05603 161 EYLAPEVLRKEPYDRTVDWWCLGAVLYE 188 (321)
T ss_pred ccCCHHHhcCCCCCCcCcccccchhhhh
Confidence 113488888888888
No 84
>cd05616 STKc_cPKC_beta Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C beta. Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, beta isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, and
Probab=99.83 E-value=9.8e-21 Score=179.94 Aligned_cols=108 Identities=20% Similarity=0.292 Sum_probs=86.8
Q ss_pred cCCCCCcceeEEEEEEEeecCcEEEEEEcCCCCh---hHHHHHHHHHHH---------------------------HHhh
Q psy6828 49 SNPDSDFRYSAIFTPIGIYKGRIFAIKRIPKKSV---DITRAMKKELKI---------------------------DIME 98 (392)
Q Consensus 49 ~~~lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~~---~~~~~~~~E~~~---------------------------~~l~ 98 (392)
.+.||+|+||.||++.+..+++.||+|.+.+... ...+....|..+ +++.
T Consensus 5 ~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~~~~~lv~E~~~ 84 (323)
T cd05616 5 LMVLGKGSFGKVMLAERKGTDELYAIKILKKDVVIQDDDVECTMVEKRVLALSGKPPFLTQLHSCFQTMDRLYFVMEYVN 84 (323)
T ss_pred EEEEeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccCCCeEeeEEEEEecCCEEEEEEcCCC
Confidence 4569999999999999999999999999975432 122334444433 2222
Q ss_pred c--------CCcCCCHHHHHHHHHHHHHHHHHHhcCCcccccCCCCCceEEcCCceEEEeccccchh
Q psy6828 99 N--------EDVKLDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLVDSRWVVKLADFGLTEF 157 (392)
Q Consensus 99 ~--------~~~~l~~~~~~~i~~qi~~~l~ylH~~~iiiHrDlKp~NIll~~~~~~kl~DFGla~~ 157 (392)
. ....+++.++..++.|++.||.|||++++ +||||||+|||++.++.+||+|||+++.
T Consensus 85 ~g~L~~~~~~~~~~~~~~~~~~~~qi~~aL~~LH~~~i-vHrDlkp~Nill~~~~~~kL~DfG~~~~ 150 (323)
T cd05616 85 GGDLMYQIQQVGRFKEPHAVFYAAEIAIGLFFLHSKGI-IYRDLKLDNVMLDSEGHIKIADFGMCKE 150 (323)
T ss_pred CCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCE-EecCCCHHHeEECCCCcEEEccCCCcee
Confidence 1 11258999999999999999999999999 9999999999999999999999999874
No 85
>cd05620 STKc_nPKC_delta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C delta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), delta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-delta plays a role in cell cycle regulation and programmed cell death in many cell types. I
Probab=99.83 E-value=8.3e-21 Score=179.92 Aligned_cols=126 Identities=22% Similarity=0.282 Sum_probs=97.5
Q ss_pred CCCCcceeEEEEEEEeecCcEEEEEEcCCCCh---hHHHHHHHHHHH---------------------------HHhhc-
Q psy6828 51 PDSDFRYSAIFTPIGIYKGRIFAIKRIPKKSV---DITRAMKKELKI---------------------------DIMEN- 99 (392)
Q Consensus 51 ~lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~~---~~~~~~~~E~~~---------------------------~~l~~- 99 (392)
.||+|+||.||++.+..+|+.||+|.+++... ...+....|..+ +++..
T Consensus 2 ~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~~~~~lv~E~~~~g 81 (316)
T cd05620 2 VLGKGSFGKVLLAELKGKGEYFAVKALKKDVVLIDDDVECTMVEKRVLALAWENPFLTHLYCTFQTKEHLFFVMEFLNGG 81 (316)
T ss_pred eeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhcchHHHHHHHHHHHHhccCCCCccCeeEEEEeCCEEEEEECCCCCC
Confidence 58999999999999999999999999975422 122334444433 22221
Q ss_pred -------CCcCCCHHHHHHHHHHHHHHHHHHhcCCcccccCCCCCceEEcCCceEEEeccccchhcccc-----------
Q psy6828 100 -------EDVKLDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLVDSRWVVKLADFGLTEFKRDA----------- 161 (392)
Q Consensus 100 -------~~~~l~~~~~~~i~~qi~~~l~ylH~~~iiiHrDlKp~NIll~~~~~~kl~DFGla~~~~~~----------- 161 (392)
....+++.++..++.|++.||.|||++++ +||||||+|||++.++.+||+|||+++.....
T Consensus 82 ~L~~~i~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i-vHrDlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~gt~ 160 (316)
T cd05620 82 DLMFHIQDKGRFDLYRATFYAAEIVCGLQFLHSKGI-IYRDLKLDNVMLDRDGHIKIADFGMCKENVFGDNRASTFCGTP 160 (316)
T ss_pred cHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCe-EecCCCHHHeEECCCCCEEeCccCCCeecccCCCceeccCCCc
Confidence 12268999999999999999999999999 99999999999999999999999988642100
Q ss_pred ------------ccccccccceeeeeee
Q psy6828 162 ------------EYTGTDQHSFLQHTYH 177 (392)
Q Consensus 162 ------------~~~~~d~~s~g~~~~~ 177 (392)
.....|+||+|+++|+
T Consensus 161 ~y~aPE~~~~~~~~~~~DiwslGvil~e 188 (316)
T cd05620 161 DYIAPEILQGLKYTFSVDWWSFGVLLYE 188 (316)
T ss_pred CccCHHHHcCCCCCcccchhhhHHHHHH
Confidence 0113499999999988
No 86
>cd07848 STKc_CDKL5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase Like 5. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 5 (CDKL5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Mutations in the gene encoding CDKL5, previously called STK9, are associated with early onset epilepsy and severe mental retardation [X-linked infantile spasm syndrome (ISSX) or West syndrome]. In addition, CDKL5 mutations also sometimes
Probab=99.83 E-value=3e-20 Score=173.30 Aligned_cols=131 Identities=18% Similarity=0.228 Sum_probs=103.5
Q ss_pred eeccCCCCCcceeEEEEEEEeecCcEEEEEEcCCCCh--hHHHHHHHHHHH-----------------------------
Q psy6828 46 SLSSNPDSDFRYSAIFTPIGIYKGRIFAIKRIPKKSV--DITRAMKKELKI----------------------------- 94 (392)
Q Consensus 46 ~~~~~~lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~~--~~~~~~~~E~~~----------------------------- 94 (392)
|...+.||+|+||.||++.+..+++.||+|.+..... ...+.+.+|+.+
T Consensus 3 y~~~~~lg~g~~~~v~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~ 82 (287)
T cd07848 3 FEVLGVVGEGAYGVVLKCRHKETKEIVAIKKFKDSEENEEVKETTLRELKMLRTLKQENIVELKEAFRRRGKLYLVFEYV 82 (287)
T ss_pred ceEEEEecccCCEEEEEEEECCCCcEEEEEEEecccccccchhhHHHHHHHHHhCCCccccchhhhEecCCEEEEEEecC
Confidence 3445679999999999999999999999999875432 234556667666
Q ss_pred -----HHhhcCCcCCCHHHHHHHHHHHHHHHHHHhcCCcccccCCCCCceEEcCCceEEEeccccchhccccc-------
Q psy6828 95 -----DIMENEDVKLDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLVDSRWVVKLADFGLTEFKRDAE------- 162 (392)
Q Consensus 95 -----~~l~~~~~~l~~~~~~~i~~qi~~~l~ylH~~~iiiHrDlKp~NIll~~~~~~kl~DFGla~~~~~~~------- 162 (392)
+.+......+++..+..++.|++.||.|||+.++ +||||||+||+++.++.+||+|||+++......
T Consensus 83 ~~~~l~~~~~~~~~~~~~~~~~~~~qi~~~L~~lH~~~i-~H~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~~~~~~~~ 161 (287)
T cd07848 83 EKNMLELLEEMPNGVPPEKVRSYIYQLIKAIHWCHKNDI-VHRDIKPENLLISHNDVLKLCDFGFARNLSEGSNANYTEY 161 (287)
T ss_pred CCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCe-ecCCCCHHHEEEcCCCcEEEeeccCccccccccccccccc
Confidence 2222223368999999999999999999999999 999999999999999999999999987543211
Q ss_pred -----------------cccccccceeeeeee
Q psy6828 163 -----------------YTGTDQHSFLQHTYH 177 (392)
Q Consensus 163 -----------------~~~~d~~s~g~~~~~ 177 (392)
...+|+||+|+++|+
T Consensus 162 ~~~~~y~aPE~~~~~~~~~~~DiwslGvil~e 193 (287)
T cd07848 162 VATRWYRSPELLLGAPYGKAVDMWSVGCILGE 193 (287)
T ss_pred ccccccCCcHHHcCCCCCCchhHHhHHHHHHH
Confidence 112488888888888
No 87
>cd05590 STKc_nPKC_eta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C eta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), eta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-eta is predominantly expressed in squamous epithelia, where it plays a crucial role in the signal
Probab=99.83 E-value=1.8e-20 Score=177.88 Aligned_cols=126 Identities=21% Similarity=0.281 Sum_probs=97.5
Q ss_pred CCCCcceeEEEEEEEeecCcEEEEEEcCCCCh---hHHHHHHHHHHH---------------------------HHhhc-
Q psy6828 51 PDSDFRYSAIFTPIGIYKGRIFAIKRIPKKSV---DITRAMKKELKI---------------------------DIMEN- 99 (392)
Q Consensus 51 ~lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~~---~~~~~~~~E~~~---------------------------~~l~~- 99 (392)
.||+|+||.||++.++.+++.||||.+.+... ...+.+..|..+ +|+..
T Consensus 2 ~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~h~~iv~~~~~~~~~~~~~iv~Ey~~~g 81 (320)
T cd05590 2 VLGKGSFGKVMLARLKESGRLYAVKVLKKDVILQDDDVECTMTEKRILSLARNHPFLTQLYCCFQTPDRLFFVMEFVNGG 81 (320)
T ss_pred eeeeCCCeEEEEEEEcCCCCEEEEEEEEHHHHhhccHHHHHHHHHHHHHhccCCCchhceeeEEEcCCEEEEEEcCCCCc
Confidence 58999999999999999999999999975422 223344455443 22211
Q ss_pred -------CCcCCCHHHHHHHHHHHHHHHHHHhcCCcccccCCCCCceEEcCCceEEEeccccchhccccc----------
Q psy6828 100 -------EDVKLDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLVDSRWVVKLADFGLTEFKRDAE---------- 162 (392)
Q Consensus 100 -------~~~~l~~~~~~~i~~qi~~~l~ylH~~~iiiHrDlKp~NIll~~~~~~kl~DFGla~~~~~~~---------- 162 (392)
....+++..+..++.|++.||.|||++++ +||||||+|||++.++.+||+|||+++......
T Consensus 82 ~L~~~i~~~~~l~~~~~~~~~~ql~~~L~~lH~~~i-vH~dlkp~NIli~~~~~~kL~DfG~~~~~~~~~~~~~~~~gt~ 160 (320)
T cd05590 82 DLMFHIQKSRRFDEARARFYAAEITSALMFLHDKGI-IYRDLKLDNVLLDHEGHCKLADFGMCKEGIFNGKTTSTFCGTP 160 (320)
T ss_pred hHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCe-EeCCCCHHHeEECCCCcEEEeeCCCCeecCcCCCcccccccCc
Confidence 12368999999999999999999999999 999999999999999999999999987431110
Q ss_pred -------------cccccccceeeeeee
Q psy6828 163 -------------YTGTDQHSFLQHTYH 177 (392)
Q Consensus 163 -------------~~~~d~~s~g~~~~~ 177 (392)
....|+||+|+++|+
T Consensus 161 ~y~aPE~~~~~~~~~~~DiwslG~il~e 188 (320)
T cd05590 161 DYIAPEILQEMLYGPSVDWWAMGVLLYE 188 (320)
T ss_pred cccCHHHHcCCCCCCccchhhhHHHHHH
Confidence 112488888888887
No 88
>cd05621 STKc_ROCK2 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 2. Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK2 (or ROK-alpha) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK2 was the first identified target of activated RhoA, and was found
Probab=99.83 E-value=9.4e-21 Score=183.42 Aligned_cols=113 Identities=18% Similarity=0.182 Sum_probs=91.9
Q ss_pred eeeccCCCCCcceeEEEEEEEeecCcEEEEEEcCCCCh---hHHHHHHHHHHH--------------------------H
Q psy6828 45 VSLSSNPDSDFRYSAIFTPIGIYKGRIFAIKRIPKKSV---DITRAMKKELKI--------------------------D 95 (392)
Q Consensus 45 ~~~~~~~lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~~---~~~~~~~~E~~~--------------------------~ 95 (392)
.|...+.||+|+||.||++.+..+++.||+|.+.+... ...+.+..|+.+ +
T Consensus 44 ~y~~~~~lG~G~fg~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~i~~~~~hp~iv~~~~~~~~~~~~~lv~E 123 (370)
T cd05621 44 DYDVVKVIGRGAFGEVQLVRHKSSQKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFCAFQDDKYLYMVME 123 (370)
T ss_pred HCeEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCEEEEEEc
Confidence 35556779999999999999999999999999965322 233446667666 2
Q ss_pred HhhcC-------CcCCCHHHHHHHHHHHHHHHHHHhcCCcccccCCCCCceEEcCCceEEEeccccchhc
Q psy6828 96 IMENE-------DVKLDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLVDSRWVVKLADFGLTEFK 158 (392)
Q Consensus 96 ~l~~~-------~~~l~~~~~~~i~~qi~~~l~ylH~~~iiiHrDlKp~NIll~~~~~~kl~DFGla~~~ 158 (392)
++..+ ...+++..+..++.||+.||.|||++++ +||||||+|||++.++.+||+|||++...
T Consensus 124 y~~gg~L~~~l~~~~~~~~~~~~~~~qil~aL~~LH~~~I-vHrDLKp~NILl~~~~~~kL~DFG~a~~~ 192 (370)
T cd05621 124 YMPGGDLVNLMSNYDVPEKWAKFYTAEVVLALDAIHSMGL-IHRDVKPDNMLLDKHGHLKLADFGTCMKM 192 (370)
T ss_pred CCCCCcHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHCCe-EecCCCHHHEEECCCCCEEEEecccceec
Confidence 22211 1158899999999999999999999999 99999999999999999999999998764
No 89
>PTZ00426 cAMP-dependent protein kinase catalytic subunit; Provisional
Probab=99.83 E-value=1.1e-20 Score=180.99 Aligned_cols=130 Identities=18% Similarity=0.177 Sum_probs=102.8
Q ss_pred eeccCCCCCcceeEEEEEEEeecC-cEEEEEEcCCCCh---hHHHHHHHHHHH---------------------------
Q psy6828 46 SLSSNPDSDFRYSAIFTPIGIYKG-RIFAIKRIPKKSV---DITRAMKKELKI--------------------------- 94 (392)
Q Consensus 46 ~~~~~~lg~G~~g~V~~~~~~~~~-~~vAiK~~~~~~~---~~~~~~~~E~~~--------------------------- 94 (392)
|...+.||+|+||.||+|.+..++ ..||+|.+.+... ...+.+.+|+.+
T Consensus 32 y~~~~~ig~G~~g~Vy~a~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~Iv~~~~~~~~~~~~~lv~E 111 (340)
T PTZ00426 32 FNFIRTLGTGSFGRVILATYKNEDFPPVAIKRFEKSKIIKQKQVDHVFSERKILNYINHPFCVNLYGSFKDESYLYLVLE 111 (340)
T ss_pred cEEEEEEeecCCeEEEEEEEECCCCeEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhCCCCCCcceEEEEEeCCEEEEEEe
Confidence 444677999999999999877655 6899999865322 234456677666
Q ss_pred --------HHhhcCCcCCCHHHHHHHHHHHHHHHHHHhcCCcccccCCCCCceEEcCCceEEEeccccchhccccc----
Q psy6828 95 --------DIMENEDVKLDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLVDSRWVVKLADFGLTEFKRDAE---- 162 (392)
Q Consensus 95 --------~~l~~~~~~l~~~~~~~i~~qi~~~l~ylH~~~iiiHrDlKp~NIll~~~~~~kl~DFGla~~~~~~~---- 162 (392)
+++... ..+++..+..++.|++.||.|||++++ +||||||+|||++.++.+||+|||+++......
T Consensus 112 y~~~g~L~~~i~~~-~~~~~~~~~~~~~qi~~aL~~LH~~~i-vHrDLkp~NILl~~~~~ikL~DFG~a~~~~~~~~~~~ 189 (340)
T PTZ00426 112 FVIGGEFFTFLRRN-KRFPNDVGCFYAAQIVLIFEYLQSLNI-VYRDLKPENLLLDKDGFIKMTDFGFAKVVDTRTYTLC 189 (340)
T ss_pred CCCCCcHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHHCCe-EccCCCHHHEEECCCCCEEEecCCCCeecCCCcceec
Confidence 233222 268999999999999999999999999 999999999999999999999999987543211
Q ss_pred ----------------cccccccceeeeeee
Q psy6828 163 ----------------YTGTDQHSFLQHTYH 177 (392)
Q Consensus 163 ----------------~~~~d~~s~g~~~~~ 177 (392)
....|+||+|+++|+
T Consensus 190 gt~~y~aPE~~~~~~~~~~~DiwSlGvil~e 220 (340)
T PTZ00426 190 GTPEYIAPEILLNVGHGKAADWWTLGIFIYE 220 (340)
T ss_pred CChhhcCHHHHhCCCCCccccccchhhHHHH
Confidence 123499999999999
No 90
>KOG0599|consensus
Probab=99.83 E-value=2e-21 Score=170.64 Aligned_cols=117 Identities=23% Similarity=0.318 Sum_probs=97.9
Q ss_pred eeeeccCCCCCcceeEEEEEEEeecCcEEEEEEcCCCC--------hhHHHHHHHHHHH---------------------
Q psy6828 44 QVSLSSNPDSDFRYSAIFTPIGIYKGRIFAIKRIPKKS--------VDITRAMKKELKI--------------------- 94 (392)
Q Consensus 44 ~~~~~~~~lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~--------~~~~~~~~~E~~~--------------------- 94 (392)
..|.....+|+|..++|.+|.++.+|+.+|+|++.... ....+.-.+|+.|
T Consensus 17 ~~y~pkeilgrgvss~vrRci~k~t~~e~a~kii~~~at~~~~e~~~~~~EaT~~Ev~ILRqv~GHP~II~l~D~yes~s 96 (411)
T KOG0599|consen 17 AKYEPKEILGRGVSSVVRRCIHKETGKEFAVKIIDVTATTESGETPYEMREATRQEISILRQVMGHPYIIDLQDVYESDA 96 (411)
T ss_pred hhcChHHHhcccchhhhhhhhhcccccceeEEEEEecccccCCccHHHHHHHHHHHHHHHHHhcCCCcEEEeeeeccCcc
Confidence 34556778999999999999999999999999996422 1345566677777
Q ss_pred ---------------HHhhcCCcCCCHHHHHHHHHHHHHHHHHHhcCCcccccCCCCCceEEcCCceEEEeccccchhcc
Q psy6828 95 ---------------DIMENEDVKLDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLVDSRWVVKLADFGLTEFKR 159 (392)
Q Consensus 95 ---------------~~l~~~~~~l~~~~~~~i~~qi~~~l~ylH~~~iiiHrDlKp~NIll~~~~~~kl~DFGla~~~~ 159 (392)
+|+...- .+++++.+.+++|+++|+.|||.++| +||||||+|||++++.++||+|||+|..+.
T Consensus 97 F~FlVFdl~prGELFDyLts~V-tlSEK~tR~iMrqlfegVeylHa~~I-VHRDLKpENILlddn~~i~isDFGFa~~l~ 174 (411)
T KOG0599|consen 97 FVFLVFDLMPRGELFDYLTSKV-TLSEKETRRIMRQLFEGVEYLHARNI-VHRDLKPENILLDDNMNIKISDFGFACQLE 174 (411)
T ss_pred hhhhhhhhcccchHHHHhhhhe-eecHHHHHHHHHHHHHHHHHHHHhhh-hhcccChhheeeccccceEEeccceeeccC
Confidence 4443332 69999999999999999999999999 999999999999999999999999998876
Q ss_pred ccc
Q psy6828 160 DAE 162 (392)
Q Consensus 160 ~~~ 162 (392)
...
T Consensus 175 ~Ge 177 (411)
T KOG0599|consen 175 PGE 177 (411)
T ss_pred Cch
Confidence 554
No 91
>cd05597 STKc_DMPK_like Catalytic domain of Myotonic Dystrophy protein kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Myotonic Dystrophy protein kinase (DMPK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The DMPK-like subfamily is composed of DMPK and DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK). Three isoforms of MRCK are known, named alpha, beta and gamma. The DMPK gene is implicated in myotonic dystrophy 1 (DM1), an inherited multisystemic disorder with symptoms that include muscle hyperexcitability, progressive muscle weakness and wasting, cataract development, testicular atrophy,
Probab=99.83 E-value=1.3e-20 Score=179.70 Aligned_cols=111 Identities=17% Similarity=0.218 Sum_probs=91.4
Q ss_pred eccCCCCCcceeEEEEEEEeecCcEEEEEEcCCCCh---hHHHHHHHHHHH-----------------------------
Q psy6828 47 LSSNPDSDFRYSAIFTPIGIYKGRIFAIKRIPKKSV---DITRAMKKELKI----------------------------- 94 (392)
Q Consensus 47 ~~~~~lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~~---~~~~~~~~E~~~----------------------------- 94 (392)
...+.||+|+||.||++.+..+++.||+|.+.+... ...+.+.+|..+
T Consensus 4 ~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~e~~ 83 (331)
T cd05597 4 EILKVIGRGAFGEVAVVKMKNTGQVYAMKILNKWEMLKRAETACFREERDVLVNGDRRWITNLHYAFQDENNLYLVMDYY 83 (331)
T ss_pred eEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHhCCCCCCCceEEEEecCCeEEEEEecC
Confidence 345679999999999999999999999999975322 233445666655
Q ss_pred ------HHhhcCCcCCCHHHHHHHHHHHHHHHHHHhcCCcccccCCCCCceEEcCCceEEEeccccchhc
Q psy6828 95 ------DIMENEDVKLDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLVDSRWVVKLADFGLTEFK 158 (392)
Q Consensus 95 ------~~l~~~~~~l~~~~~~~i~~qi~~~l~ylH~~~iiiHrDlKp~NIll~~~~~~kl~DFGla~~~ 158 (392)
+++......+++..+..++.||+.||.|||++++ +||||||+|||++.++.+||+|||++...
T Consensus 84 ~g~~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i-vH~dlkp~Nill~~~~~~kl~Dfg~~~~~ 152 (331)
T cd05597 84 VGGDLLTLLSKFEDRLPEDMARFYLAEMVLAIDSVHQLGY-VHRDIKPDNVLLDKNGHIRLADFGSCLRL 152 (331)
T ss_pred CCCcHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCe-EECCCCHHHEEECCCCCEEEEECCceeec
Confidence 3333333468999999999999999999999999 99999999999999999999999998653
No 92
>cd05615 STKc_cPKC_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C alpha. Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, a
Probab=99.83 E-value=1.1e-20 Score=179.67 Aligned_cols=108 Identities=21% Similarity=0.273 Sum_probs=87.9
Q ss_pred cCCCCCcceeEEEEEEEeecCcEEEEEEcCCCCh---hHHHHHHHHHHH---------------------------HHhh
Q psy6828 49 SNPDSDFRYSAIFTPIGIYKGRIFAIKRIPKKSV---DITRAMKKELKI---------------------------DIME 98 (392)
Q Consensus 49 ~~~lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~~---~~~~~~~~E~~~---------------------------~~l~ 98 (392)
.+.||+|+||.||++.+..+|+.||+|++.+... ...+.+..|..+ +|+.
T Consensus 5 ~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~~~~~lv~Ey~~ 84 (323)
T cd05615 5 LMVLGKGSFGKVMLAERKGTDELYAIKILKKDVVIQDDDVECTMVEKRVLALQDKPPFLTQLHSCFQTVDRLYFVMEYVN 84 (323)
T ss_pred EEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccCCCchhheeeEEecCCEEEEEEcCCC
Confidence 3569999999999999999999999999975422 222344455444 2222
Q ss_pred cC--------CcCCCHHHHHHHHHHHHHHHHHHhcCCcccccCCCCCceEEcCCceEEEeccccchh
Q psy6828 99 NE--------DVKLDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLVDSRWVVKLADFGLTEF 157 (392)
Q Consensus 99 ~~--------~~~l~~~~~~~i~~qi~~~l~ylH~~~iiiHrDlKp~NIll~~~~~~kl~DFGla~~ 157 (392)
.+ ...+++.++..++.|++.||.|||++++ +||||||+|||++.++.+||+|||+++.
T Consensus 85 ~g~L~~~i~~~~~l~~~~~~~i~~qi~~al~~lH~~~i-vHrDikp~Nill~~~~~ikL~Dfg~~~~ 150 (323)
T cd05615 85 GGDLMYHIQQVGKFKEPQAVFYAAEISVGLFFLHRRGI-IYRDLKLDNVMLDSEGHIKIADFGMCKE 150 (323)
T ss_pred CCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCe-eccCCCHHHeEECCCCCEEEeccccccc
Confidence 21 1258999999999999999999999999 9999999999999999999999999875
No 93
>cd05618 STKc_aPKC_iota Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C iota. Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, iota isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-iota is directly implicated in carcinogenesis. It is critical to oncogenic signaling mediated by Ras and Bcr-Abl. The PKC-iota gene is the target o
Probab=99.82 E-value=2e-20 Score=178.37 Aligned_cols=107 Identities=23% Similarity=0.297 Sum_probs=88.0
Q ss_pred CCCCCcceeEEEEEEEeecCcEEEEEEcCCCCh---hHHHHHHHHHHH---------------------------HHhhc
Q psy6828 50 NPDSDFRYSAIFTPIGIYKGRIFAIKRIPKKSV---DITRAMKKELKI---------------------------DIMEN 99 (392)
Q Consensus 50 ~~lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~~---~~~~~~~~E~~~---------------------------~~l~~ 99 (392)
+.||+|+||.||++.+..+++.||+|.+.+... ...+.+..|..+ +++..
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~~~~hp~iv~~~~~~~~~~~~~lv~E~~~~ 80 (329)
T cd05618 1 RVIGRGSYAKVLLVRLKKTERIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQTESRLFFVIEYVNG 80 (329)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEhhHhcchhHHHHHHHHHHHHHhcCCCCcCCceeeEEEeCCEEEEEEeCCCC
Confidence 358999999999999999999999999976422 233445556544 22221
Q ss_pred --------CCcCCCHHHHHHHHHHHHHHHHHHhcCCcccccCCCCCceEEcCCceEEEeccccchh
Q psy6828 100 --------EDVKLDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLVDSRWVVKLADFGLTEF 157 (392)
Q Consensus 100 --------~~~~l~~~~~~~i~~qi~~~l~ylH~~~iiiHrDlKp~NIll~~~~~~kl~DFGla~~ 157 (392)
....+++..+..++.|++.||.|||++++ +||||||+||+++.++.+||+|||+++.
T Consensus 81 ~~L~~~~~~~~~l~~~~~~~i~~qi~~~l~~lH~~~i-vH~Dikp~Nili~~~~~~kL~DfG~~~~ 145 (329)
T cd05618 81 GDLMFHMQRQRKLPEEHARFYSAEISLALNYLHERGI-IYRDLKLDNVLLDSEGHIKLTDYGMCKE 145 (329)
T ss_pred CCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCe-eeCCCCHHHEEECCCCCEEEeeCCcccc
Confidence 12368999999999999999999999999 9999999999999999999999999874
No 94
>cd07876 STKc_JNK2 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 2. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 2 (JNK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn
Probab=99.82 E-value=1.5e-20 Score=181.25 Aligned_cols=134 Identities=21% Similarity=0.241 Sum_probs=104.7
Q ss_pred ceeeeccCCCCCcceeEEEEEEEeecCcEEEEEEcCCCCh--hHHHHHHHHHHH--------------------------
Q psy6828 43 SQVSLSSNPDSDFRYSAIFTPIGIYKGRIFAIKRIPKKSV--DITRAMKKELKI-------------------------- 94 (392)
Q Consensus 43 ~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~~--~~~~~~~~E~~~-------------------------- 94 (392)
.+.|...+.||+|+||.||++.+..+|+.||+|.+.+... ...+.+.+|+.+
T Consensus 20 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~ 99 (359)
T cd07876 20 LKRYQQLKPIGSGAQGIVCAAFDTVLGINVAVKKLSRPFQNQTHAKRAYRELVLLKCVNHKNIISLLNVFTPQKSLEEFQ 99 (359)
T ss_pred hhceEEEEEeecCCCEEEEEEEEcCCCceeEEEEecccccchhHHHHHHHHHHHHHhCCCCCEeeeeeeeccCCCccccc
Confidence 4556777889999999999999999999999999975422 334556667666
Q ss_pred ------HHhhc-----CCcCCCHHHHHHHHHHHHHHHHHHhcCCcccccCCCCCceEEcCCceEEEeccccchhccccc-
Q psy6828 95 ------DIMEN-----EDVKLDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLVDSRWVVKLADFGLTEFKRDAE- 162 (392)
Q Consensus 95 ------~~l~~-----~~~~l~~~~~~~i~~qi~~~l~ylH~~~iiiHrDlKp~NIll~~~~~~kl~DFGla~~~~~~~- 162 (392)
+++.. ....+++..+..++.|++.||.|||++++ +||||||+|||++.++.+||+|||+++......
T Consensus 100 ~~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~qi~~~L~~LH~~~i-vHrDlkp~NIl~~~~~~~kl~Dfg~a~~~~~~~~ 178 (359)
T cd07876 100 DVYLVMELMDANLCQVIHMELDHERMSYLLYQMLCGIKHLHSAGI-IHRDLKPSNIVVKSDCTLKILDFGLARTACTNFM 178 (359)
T ss_pred eeEEEEeCCCcCHHHHHhccCCHHHHHHHHHHHHHHHHHHHhCCc-ccCCCCHHHEEECCCCCEEEecCCCccccccCcc
Confidence 01110 01147888899999999999999999999 999999999999999999999999987532211
Q ss_pred ---------------------cccccccceeeeeee
Q psy6828 163 ---------------------YTGTDQHSFLQHTYH 177 (392)
Q Consensus 163 ---------------------~~~~d~~s~g~~~~~ 177 (392)
....|+||+|+++|+
T Consensus 179 ~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~e 214 (359)
T cd07876 179 MTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGE 214 (359)
T ss_pred CCCCcccCCCCCchhccCCCCCcchhhHHHHHHHHH
Confidence 112489999998888
No 95
>cd07878 STKc_p38beta_MAPK11 Catalytic domain of the Serine/Threonine Kinase, p38beta Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38beta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38beta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38beta, also called MAPK11, is
Probab=99.82 E-value=2.2e-20 Score=179.02 Aligned_cols=133 Identities=22% Similarity=0.317 Sum_probs=103.3
Q ss_pred eeeeccCCCCCcceeEEEEEEEeecCcEEEEEEcCCCCh--hHHHHHHHHHHH-------------HHhhc---------
Q psy6828 44 QVSLSSNPDSDFRYSAIFTPIGIYKGRIFAIKRIPKKSV--DITRAMKKELKI-------------DIMEN--------- 99 (392)
Q Consensus 44 ~~~~~~~~lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~~--~~~~~~~~E~~~-------------~~l~~--------- 99 (392)
..|...+.||+|+||.||++.+..+++.||||.+.+... ...+.+.+|+.+ ++...
T Consensus 15 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~ 94 (343)
T cd07878 15 ERYQNLTPVGSGAYGSVCSAYDTRLRQKVAVKKLSRPFQSLIHARRTYRELRLLKHMKHENVIGLLDVFTPATSIENFNE 94 (343)
T ss_pred hhhhhheecccCCCeEEEEEEECCCCCEEEEEEeCchhhhhHHHHHHHHHHHHHHhcCCCchhhhhhhhcccccccccCc
Confidence 446667889999999999999999999999999975432 233445566665 11100
Q ss_pred ----------------CCcCCCHHHHHHHHHHHHHHHHHHhcCCcccccCCCCCceEEcCCceEEEeccccchhccccc-
Q psy6828 100 ----------------EDVKLDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLVDSRWVVKLADFGLTEFKRDAE- 162 (392)
Q Consensus 100 ----------------~~~~l~~~~~~~i~~qi~~~l~ylH~~~iiiHrDlKp~NIll~~~~~~kl~DFGla~~~~~~~- 162 (392)
....+++..+..++.|++.||.|||++++ +||||||+|||++.++.+||+|||+++......
T Consensus 95 ~~~~~~~~~~~l~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~i-vHrdikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~ 173 (343)
T cd07878 95 VYLVTNLMGADLNNIVKCQKLSDEHVQFLIYQLLRGLKYIHSAGI-IHRDLKPSNVAVNEDCELRILDFGLARQADDEMT 173 (343)
T ss_pred EEEEeecCCCCHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCe-ecccCChhhEEECCCCCEEEcCCccceecCCCcC
Confidence 11258999999999999999999999999 999999999999999999999999987543211
Q ss_pred --------------------cccccccceeeeeee
Q psy6828 163 --------------------YTGTDQHSFLQHTYH 177 (392)
Q Consensus 163 --------------------~~~~d~~s~g~~~~~ 177 (392)
....|+||+|+++|+
T Consensus 174 ~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~e 208 (343)
T cd07878 174 GYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAE 208 (343)
T ss_pred CccccccccCchHhcCCccCCchhhhHhHHHHHHH
Confidence 112478888888777
No 96
>cd05614 STKc_MSK2_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 2. Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK2, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph
Probab=99.82 E-value=1.8e-20 Score=178.70 Aligned_cols=108 Identities=19% Similarity=0.266 Sum_probs=86.8
Q ss_pred ccCCCCCcceeEEEEEEEe---ecCcEEEEEEcCCCCh----hHHHHHHHHHHH--------------------------
Q psy6828 48 SSNPDSDFRYSAIFTPIGI---YKGRIFAIKRIPKKSV----DITRAMKKELKI-------------------------- 94 (392)
Q Consensus 48 ~~~~lg~G~~g~V~~~~~~---~~~~~vAiK~~~~~~~----~~~~~~~~E~~~-------------------------- 94 (392)
..+.||+|+||.||++.+. .+++.||+|.+.+... ...+.+.+|..+
T Consensus 4 ~~~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~~~~lv 83 (332)
T cd05614 4 LLKVLGTGAYGKVFLVRKVTGHDTGKLYAMKVLQKAALVQKAKTVEHTRTERNVLEHVRQSPFLVTLHYAFQTEAKLHLI 83 (332)
T ss_pred EEEEEeecCCEEEEEEEEcccCCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHHhccCCCCcccEEEEEecCCEEEEE
Confidence 3567999999999998864 4789999999965322 223445566655
Q ss_pred ----------HHhhcCCcCCCHHHHHHHHHHHHHHHHHHhcCCcccccCCCCCceEEcCCceEEEeccccchh
Q psy6828 95 ----------DIMENEDVKLDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLVDSRWVVKLADFGLTEF 157 (392)
Q Consensus 95 ----------~~l~~~~~~l~~~~~~~i~~qi~~~l~ylH~~~iiiHrDlKp~NIll~~~~~~kl~DFGla~~ 157 (392)
+++... ..+++.++..++.|++.||.|||++++ +||||||+|||++.++.+||+|||+++.
T Consensus 84 ~e~~~~g~L~~~l~~~-~~~~~~~~~~~~~qi~~~l~~lH~~~i-vHrDlkp~Nili~~~~~~kl~DfG~~~~ 154 (332)
T cd05614 84 LDYVSGGEMFTHLYQR-DNFSEDEVRFYSGEIILALEHLHKLGI-VYRDIKLENILLDSEGHVVLTDFGLSKE 154 (332)
T ss_pred EeCCCCCcHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHHCCc-EecCCCHHHeEECCCCCEEEeeCcCCcc
Confidence 222222 258999999999999999999999999 9999999999999999999999999875
No 97
>cd05617 STKc_aPKC_zeta Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C zeta. Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, zeta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-zeta plays a critical role in activating the glucose transport response. It is activated by glucose, insulin, and exercise through diverse pathways
Probab=99.82 E-value=1.9e-20 Score=178.27 Aligned_cols=107 Identities=21% Similarity=0.282 Sum_probs=88.5
Q ss_pred CCCCCcceeEEEEEEEeecCcEEEEEEcCCCCh---hHHHHHHHHHHH---------------------------HHhhc
Q psy6828 50 NPDSDFRYSAIFTPIGIYKGRIFAIKRIPKKSV---DITRAMKKELKI---------------------------DIMEN 99 (392)
Q Consensus 50 ~~lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~~---~~~~~~~~E~~~---------------------------~~l~~ 99 (392)
+.||+|+||+||++.+..+++.||+|++++... ...+.+.+|..+ +++..
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~~~ 80 (327)
T cd05617 1 RVIGRGSYAKVLLVRLKKNDQIYAMKVVKKELVHDDEDIDWVQTEKHVFEQASSNPFLVGLHSCFQTTSRLFLVIEYVNG 80 (327)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhhcCCCCEeeEEEEEEeCCEEEEEEeCCCC
Confidence 358999999999999999999999999976432 233445666554 22221
Q ss_pred --------CCcCCCHHHHHHHHHHHHHHHHHHhcCCcccccCCCCCceEEcCCceEEEeccccchh
Q psy6828 100 --------EDVKLDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLVDSRWVVKLADFGLTEF 157 (392)
Q Consensus 100 --------~~~~l~~~~~~~i~~qi~~~l~ylH~~~iiiHrDlKp~NIll~~~~~~kl~DFGla~~ 157 (392)
....+++..+..++.|++.||.|||++++ +||||||+|||++.++.+||+|||+++.
T Consensus 81 ~~L~~~~~~~~~l~~~~~~~~~~qi~~al~~lH~~~i-vHrDlkp~Nili~~~~~~kl~Dfg~~~~ 145 (327)
T cd05617 81 GDLMFHMQRQRKLPEEHARFYAAEICIALNFLHERGI-IYRDLKLDNVLLDADGHIKLTDYGMCKE 145 (327)
T ss_pred CcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCe-eccCCCHHHEEEeCCCCEEEecccccee
Confidence 12269999999999999999999999999 9999999999999999999999999874
No 98
>cd05608 STKc_GRK1 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 1. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK1, also called rhodopsin kinase, belongs to the visual g
Probab=99.82 E-value=2.6e-20 Score=173.32 Aligned_cols=106 Identities=23% Similarity=0.271 Sum_probs=87.9
Q ss_pred CCCcceeEEEEEEEeecCcEEEEEEcCCCCh---hHHHHHHHHHHH--------------------------HHhhc---
Q psy6828 52 DSDFRYSAIFTPIGIYKGRIFAIKRIPKKSV---DITRAMKKELKI--------------------------DIMEN--- 99 (392)
Q Consensus 52 lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~~---~~~~~~~~E~~~--------------------------~~l~~--- 99 (392)
||+|+||+||++.+..+++.||+|.+.+... ...+.+..|+.+ +++..
T Consensus 1 lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~i~~~~~~~~~~~~~~lv~e~~~~g~L 80 (280)
T cd05608 1 LGKGGFGEVSACQMRATGKLYACKKLNKKRLKKRKGYEGAMVEKRILAKVHSRFIVSLAYAFQTKTDLCLVMTIMNGGDL 80 (280)
T ss_pred CCCCCceeEEEEEEccCCcEEEEEeeeHHHHhhhHHHHHHHHHHHHHHhCCCCcEeeeeEEEcCCCeEEEEEeCCCCCCH
Confidence 6999999999999999999999999975433 223455667665 22211
Q ss_pred ---------CCcCCCHHHHHHHHHHHHHHHHHHhcCCcccccCCCCCceEEcCCceEEEeccccchhc
Q psy6828 100 ---------EDVKLDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLVDSRWVVKLADFGLTEFK 158 (392)
Q Consensus 100 ---------~~~~l~~~~~~~i~~qi~~~l~ylH~~~iiiHrDlKp~NIll~~~~~~kl~DFGla~~~ 158 (392)
.+..+++..+..++.|++.||.|||++++ +||||||+||+++.++.+||+|||++...
T Consensus 81 ~~~~~~~~~~~~~l~~~~~~~~~~qi~~~l~~lH~~~i-~H~dlkp~Nili~~~~~~~l~dfg~~~~~ 147 (280)
T cd05608 81 RYHIYNVDEENPGFPEPRACFYTAQIISGLEHLHQRRI-IYRDLKPENVLLDNDGNVRISDLGLAVEL 147 (280)
T ss_pred HHHHHhccccCCCCCHHHHHHHHHHHHHHHHHHHHCCc-ccCCCCHHHEEECCCCCEEEeeCccceec
Confidence 22358999999999999999999999999 99999999999999999999999998754
No 99
>cd05588 STKc_aPKC Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C. Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. They contain a C2-like region, instead of a calcium-binding (C2) region found in classical PKCs, in their regulatory domain. There are two aPKC isoforms, zeta and iota. aPKCs are involved in many cellular functions incl
Probab=99.82 E-value=2.1e-20 Score=178.12 Aligned_cols=106 Identities=23% Similarity=0.291 Sum_probs=87.7
Q ss_pred CCCCcceeEEEEEEEeecCcEEEEEEcCCCCh---hHHHHHHHHHHH---------------------------HHhhc-
Q psy6828 51 PDSDFRYSAIFTPIGIYKGRIFAIKRIPKKSV---DITRAMKKELKI---------------------------DIMEN- 99 (392)
Q Consensus 51 ~lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~~---~~~~~~~~E~~~---------------------------~~l~~- 99 (392)
.||+|+||.||++.+..+++.||+|++++... ...+.+..|..+ +++..
T Consensus 2 ~lG~G~~g~V~~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~e~~il~~~~~hp~Iv~~~~~~~~~~~~~lv~e~~~~g 81 (329)
T cd05588 2 VIGRGSYAKVLLVELKKTRRIYAMKVIKKELVNDDEDIDWVQTEKHVFETASNHPFLVGLHSCFQTESRLFFVIEFVSGG 81 (329)
T ss_pred eEeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccCCCCCCceEEEEEcCCEEEEEEeCCCCC
Confidence 58999999999999999999999999976432 223445566554 22211
Q ss_pred -------CCcCCCHHHHHHHHHHHHHHHHHHhcCCcccccCCCCCceEEcCCceEEEeccccchh
Q psy6828 100 -------EDVKLDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLVDSRWVVKLADFGLTEF 157 (392)
Q Consensus 100 -------~~~~l~~~~~~~i~~qi~~~l~ylH~~~iiiHrDlKp~NIll~~~~~~kl~DFGla~~ 157 (392)
....+++..+..++.|++.||.|||++++ +||||||+|||++.++.+||+|||+++.
T Consensus 82 ~L~~~~~~~~~l~~~~~~~~~~qi~~~l~~lH~~~i-vH~dlkp~Nili~~~~~~kL~Dfg~~~~ 145 (329)
T cd05588 82 DLMFHMQRQRKLPEEHARFYSAEISLALNFLHERGI-IYRDLKLDNVLLDAEGHIKLTDYGMCKE 145 (329)
T ss_pred CHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCe-EecCCCHHHeEECCCCCEEECcCccccc
Confidence 12369999999999999999999999999 9999999999999999999999999864
No 100
>KOG1035|consensus
Probab=99.82 E-value=2.4e-20 Score=191.67 Aligned_cols=97 Identities=28% Similarity=0.383 Sum_probs=72.3
Q ss_pred CHHHHHHHHHHHHHHHHHHhcCCcccccCCCCCceEEcCCceEEEeccccchhccc----cc------------cccccc
Q psy6828 105 DNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLVDSRWVVKLADFGLTEFKRD----AE------------YTGTDQ 168 (392)
Q Consensus 105 ~~~~~~~i~~qi~~~l~ylH~~~iiiHrDlKp~NIll~~~~~~kl~DFGla~~~~~----~~------------~~~~d~ 168 (392)
.....+++++||++||.|+|+.|+ |||||||.||+|++++.+||+|||+++.... .. ....-.
T Consensus 695 ~~d~~wrLFreIlEGLaYIH~~gi-IHRDLKP~NIFLd~~~~VKIGDFGLAt~~~~~~~~~d~~~~~~~~~~g~~~~~~T 773 (1351)
T KOG1035|consen 695 QRDEAWRLFREILEGLAYIHDQGI-IHRDLKPRNIFLDSRNSVKIGDFGLATDLKENLESIDQDLSFSTNRAGSNDGDLT 773 (1351)
T ss_pred hhHHHHHHHHHHHHHHHHHHhCce-eeccCCcceeEEcCCCCeeecccccchhhhhhhhhHhhccCccccccCCCCcccc
Confidence 366789999999999999999998 9999999999999999999999999987220 00 000122
Q ss_pred cceeeeeeeccC-------CCCcccccccccchhhhccCCH
Q psy6828 169 HSFLQHTYHVNR-------AGSTESLHCKCDEALLFEMLPR 202 (392)
Q Consensus 169 ~s~g~~~~~~~~-------~~~~~~~d~~~~~~lL~~~lp~ 202 (392)
-..|+.+|.+|+ ..++.++|+.+++.+|.+|+.+
T Consensus 774 s~VGTalYvAPEll~~~~~~~Yn~KiDmYSLGIVlFEM~yP 814 (1351)
T KOG1035|consen 774 SQVGTALYVAPELLSDTSSNKYNSKIDMYSLGIVLFEMLYP 814 (1351)
T ss_pred cccceeeeecHHHhcccccccccchhhhHHHHHHHHHHhcc
Confidence 335777777665 1456677777777776666543
No 101
>cd07862 STKc_CDK6 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 6. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 6 (CDK6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK6 is regulated by D-type cyclins and INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein, implicating it to function in regulating the early G1 phase of the cell cycle. It is expressed ubiquitously and is localized in the cytopla
Probab=99.82 E-value=2.5e-20 Score=174.07 Aligned_cols=131 Identities=24% Similarity=0.306 Sum_probs=96.8
Q ss_pred eeccCCCCCcceeEEEEEEEee-cCcEEEEEEcCCCCh--hHHHHHHHHHHH----------------------------
Q psy6828 46 SLSSNPDSDFRYSAIFTPIGIY-KGRIFAIKRIPKKSV--DITRAMKKELKI---------------------------- 94 (392)
Q Consensus 46 ~~~~~~lg~G~~g~V~~~~~~~-~~~~vAiK~~~~~~~--~~~~~~~~E~~~---------------------------- 94 (392)
|...+.||+|+||+||++.+.. +++.||+|.++.... .....+.+|+.+
T Consensus 3 Y~~~~~lg~G~~g~Vy~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~hpniv~~~~~~~~~~~~~~~ 82 (290)
T cd07862 3 YECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVVRLFDVCTVSRTDRET 82 (290)
T ss_pred cceeeEeccCCCeEEEEEEEcCCCCeEEEEEEEecccCCCCchHHHHHHHHHHHhhcccCCCCcceEEEEEecccCCCCC
Confidence 4456789999999999999854 468899999864322 111223334332
Q ss_pred --------------HHhhc-CCcCCCHHHHHHHHHHHHHHHHHHhcCCcccccCCCCCceEEcCCceEEEeccccchhcc
Q psy6828 95 --------------DIMEN-EDVKLDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLVDSRWVVKLADFGLTEFKR 159 (392)
Q Consensus 95 --------------~~l~~-~~~~l~~~~~~~i~~qi~~~l~ylH~~~iiiHrDlKp~NIll~~~~~~kl~DFGla~~~~ 159 (392)
+++.. ....+++..+..++.|++.||.|||++++ +||||||+|||++.++.+||+|||+++...
T Consensus 83 ~~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~lH~~~i-iH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~ 161 (290)
T cd07862 83 KLTLVFEHVDQDLTTYLDKVPEPGVPTETIKDMMFQLLRGLDFLHSHRV-VHRDLKPQNILVTSSGQIKLADFGLARIYS 161 (290)
T ss_pred cEEEEEccCCCCHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCe-eeCCCCHHHEEEcCCCCEEEccccceEecc
Confidence 11111 12247889999999999999999999999 999999999999999999999999987543
Q ss_pred ccc----------------------cccccccceeeeeee
Q psy6828 160 DAE----------------------YTGTDQHSFLQHTYH 177 (392)
Q Consensus 160 ~~~----------------------~~~~d~~s~g~~~~~ 177 (392)
... ....|+||+|+++|+
T Consensus 162 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~il~e 201 (290)
T cd07862 162 FQMALTSVVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAE 201 (290)
T ss_pred CCcccccccccccccChHHHhCCCCCCccchHHHHHHHHH
Confidence 211 112488888888887
No 102
>cd05623 STKc_MRCK_alpha Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase alpha. Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKalpha is expressed ubiquitously in many tissues. It plays a role in the regulation of peripheral actin reorganization and neurite outgrowth. It may also play a role in the transferrin iron uptake pathw
Probab=99.82 E-value=1.7e-20 Score=178.95 Aligned_cols=111 Identities=17% Similarity=0.190 Sum_probs=90.7
Q ss_pred eccCCCCCcceeEEEEEEEeecCcEEEEEEcCCCCh---hHHHHHHHHHHH-----------------------------
Q psy6828 47 LSSNPDSDFRYSAIFTPIGIYKGRIFAIKRIPKKSV---DITRAMKKELKI----------------------------- 94 (392)
Q Consensus 47 ~~~~~lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~~---~~~~~~~~E~~~----------------------------- 94 (392)
...+.||+|+||.||++.+..+++.||+|.+.+... .....+..|..+
T Consensus 4 ~~~~~lG~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~ey~ 83 (332)
T cd05623 4 EILKVIGRGAFGEVAVVKLKNADKVFAMKILNKWEMLKRAETACFREERDVLVNGDNQWITTLHYAFQDENNLYLVMDYY 83 (332)
T ss_pred eEEEEEEeCCCeEEEEEEECCCCCEEEEEEEeHHHHHHhhHHHHHHHHHHHHhhCCCCCEeeEEEEEecCCEEEEEEecc
Confidence 345679999999999999999999999999965322 223345556554
Q ss_pred ------HHhhcCCcCCCHHHHHHHHHHHHHHHHHHhcCCcccccCCCCCceEEcCCceEEEeccccchhc
Q psy6828 95 ------DIMENEDVKLDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLVDSRWVVKLADFGLTEFK 158 (392)
Q Consensus 95 ------~~l~~~~~~l~~~~~~~i~~qi~~~l~ylH~~~iiiHrDlKp~NIll~~~~~~kl~DFGla~~~ 158 (392)
+++.+....+++..+..++.|++.||.|||++++ +||||||+|||++.++.+||+|||++...
T Consensus 84 ~~g~L~~~l~~~~~~l~~~~~~~~~~qi~~al~~lH~~~i-iHrDlkp~Nili~~~~~~kL~DfG~a~~~ 152 (332)
T cd05623 84 VGGDLLTLLSKFEDRLPEDMARFYLAEMVIAIDSVHQLHY-VHRDIKPDNILMDMNGHIRLADFGSCLKL 152 (332)
T ss_pred CCCcHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCe-EecCCCHHHEEECCCCCEEEeecchheec
Confidence 4444433468999999999999999999999999 99999999999999999999999998643
No 103
>PTZ00283 serine/threonine protein kinase; Provisional
Probab=99.82 E-value=2.9e-20 Score=186.31 Aligned_cols=134 Identities=18% Similarity=0.210 Sum_probs=105.9
Q ss_pred ceeeeccCCCCCcceeEEEEEEEeecCcEEEEEEcCCCCh--hHHHHHHHHHHH--------------------------
Q psy6828 43 SQVSLSSNPDSDFRYSAIFTPIGIYKGRIFAIKRIPKKSV--DITRAMKKELKI-------------------------- 94 (392)
Q Consensus 43 ~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~~--~~~~~~~~E~~~-------------------------- 94 (392)
...|...+.||+|+||+||++.+..+|+.||||.+..... .....+.+|+.+
T Consensus 31 ~~rY~i~~~LG~G~fG~Vy~a~~~~~g~~vAvK~i~~~~~~~~~~~~~~~Ei~~l~~~~h~~iv~~~~~~~~~~~~~~~~ 110 (496)
T PTZ00283 31 AKKYWISRVLGSGATGTVLCAKRVSDGEPFAVKVVDMEGMSEADKNRAQAEVCCLLNCDFFSIVKCHEDFAKKDPRNPEN 110 (496)
T ss_pred CCCEEEEEEEecCCCEEEEEEEEcCCCCEEEEEEEecccCCHHHHHHHHHHHHHHhcCCCCcEEEeecceecccccCccc
Confidence 4667778899999999999999999999999999976533 334455566543
Q ss_pred --------HHhhc------------CCcCCCHHHHHHHHHHHHHHHHHHhcCCcccccCCCCCceEEcCCceEEEecccc
Q psy6828 95 --------DIMEN------------EDVKLDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLVDSRWVVKLADFGL 154 (392)
Q Consensus 95 --------~~l~~------------~~~~l~~~~~~~i~~qi~~~l~ylH~~~iiiHrDlKp~NIll~~~~~~kl~DFGl 154 (392)
+|+.. ....+++..+..++.|++.||.|||++++ +||||||+|||++.++.+||+|||+
T Consensus 111 ~~~i~lV~Ey~~~gsL~~~l~~~~~~~~~l~e~~~~~i~~qll~aL~~lH~~~I-iHrDLKP~NILl~~~~~vkL~DFGl 189 (496)
T PTZ00283 111 VLMIALVLDYANAGDLRQEIKSRAKTNRTFREHEAGLLFIQVLLAVHHVHSKHM-IHRDIKSANILLCSNGLVKLGDFGF 189 (496)
T ss_pred ceEEEEEEeCCCCCcHHHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHhCCE-ecCCCCHHHEEEeCCCCEEEEeccc
Confidence 11111 12258889999999999999999999999 9999999999999999999999999
Q ss_pred chhccccc-------------------------cccccccceeeeeee
Q psy6828 155 TEFKRDAE-------------------------YTGTDQHSFLQHTYH 177 (392)
Q Consensus 155 a~~~~~~~-------------------------~~~~d~~s~g~~~~~ 177 (392)
++...... ....|+||||+++|+
T Consensus 190 s~~~~~~~~~~~~~~~~Gt~~Y~aPE~~~~~~~s~k~DVwSlGvilye 237 (496)
T PTZ00283 190 SKMYAATVSDDVGRTFCGTPYYVAPEIWRRKPYSKKADMFSLGVLLYE 237 (496)
T ss_pred CeeccccccccccccccCCcceeCHHHhCCCCCCcHHHHHHHHHHHHH
Confidence 87542210 112499999999998
No 104
>KOG0194|consensus
Probab=99.82 E-value=6.5e-20 Score=177.50 Aligned_cols=128 Identities=24% Similarity=0.337 Sum_probs=108.5
Q ss_pred cCCCCCcceeEEEEEEEeecCc---E-EEEEEcCCCC---hhHHHHHHHHHHH---------------------------
Q psy6828 49 SNPDSDFRYSAIFTPIGIYKGR---I-FAIKRIPKKS---VDITRAMKKELKI--------------------------- 94 (392)
Q Consensus 49 ~~~lg~G~~g~V~~~~~~~~~~---~-vAiK~~~~~~---~~~~~~~~~E~~~--------------------------- 94 (392)
...||+|+||.||+|..+..+. . ||||...... .....++.+|.++
T Consensus 162 ~kkLGeGaFGeV~~G~l~~~~~~~~~~VAvK~~k~~~~~~~~~~~e~m~EArvMr~l~H~NVVr~yGVa~~~~Pl~ivmE 241 (474)
T KOG0194|consen 162 GKKLGEGAFGEVFKGKLKLKNGFKVVPVAVKTTKGSSELTKEQIKEFMKEARVMRQLNHPNVVRFYGVAVLEEPLMLVME 241 (474)
T ss_pred cceeecccccEEEEEEEEecCCceeeeeEEEeecccccccHHHHHHHHHHHHHHHhCCCCCEEEEEEEEcCCCccEEEEE
Confidence 3789999999999999876533 3 8999998532 4677889999998
Q ss_pred --------HHhhcCCcCCCHHHHHHHHHHHHHHHHHHhcCCcccccCCCCCceEEcCCceEEEeccccchhccccc----
Q psy6828 95 --------DIMENEDVKLDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLVDSRWVVKLADFGLTEFKRDAE---- 162 (392)
Q Consensus 95 --------~~l~~~~~~l~~~~~~~i~~qi~~~l~ylH~~~iiiHrDlKp~NIll~~~~~~kl~DFGla~~~~~~~---- 162 (392)
+||+.....++..+...++.+.++||.|||++++ |||||-.+|+|++.++.+||+|||+++.-....
T Consensus 242 l~~gGsL~~~L~k~~~~v~~~ek~~~~~~AA~Gl~YLh~k~~-IHRDIAARNcL~~~~~~vKISDFGLs~~~~~~~~~~~ 320 (474)
T KOG0194|consen 242 LCNGGSLDDYLKKNKKSLPTLEKLRFCYDAARGLEYLHSKNC-IHRDIAARNCLYSKKGVVKISDFGLSRAGSQYVMKKF 320 (474)
T ss_pred ecCCCcHHHHHHhCCCCCCHHHHHHHHHHHHhHHHHHHHCCC-cchhHhHHHheecCCCeEEeCccccccCCcceeeccc
Confidence 7777665579999999999999999999999999 999999999999999999999999998653111
Q ss_pred -------------------cccccccceeeeeee
Q psy6828 163 -------------------YTGTDQHSFLQHTYH 177 (392)
Q Consensus 163 -------------------~~~~d~~s~g~~~~~ 177 (392)
...+||||||+++||
T Consensus 321 ~~klPirWLAPEtl~~~~~s~kTDV~sfGV~~~E 354 (474)
T KOG0194|consen 321 LKKLPIRWLAPETLNTGIFSFKTDVWSFGVLLWE 354 (474)
T ss_pred cccCcceecChhhhccCccccccchhheeeeEEe
Confidence 124599999999999
No 105
>KOG1989|consensus
Probab=99.82 E-value=3.1e-20 Score=186.50 Aligned_cols=114 Identities=20% Similarity=0.294 Sum_probs=98.5
Q ss_pred eeeeccCCCCCcceeEEEEEEEeecCcEEEEEEcCCCChhHHHHHHHHHHH-----------------------------
Q psy6828 44 QVSLSSNPDSDFRYSAIFTPIGIYKGRIFAIKRIPKKSVDITRAMKKELKI----------------------------- 94 (392)
Q Consensus 44 ~~~~~~~~lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~~~~~~~~~~E~~~----------------------------- 94 (392)
......+.|.+|||+.||++.+...|..||+|++-......++.+.+|+.+
T Consensus 37 ~~v~V~~vLAEGGFa~VYla~~~~~~~~~AlKrm~~~de~~L~~v~~EI~~MK~L~gh~nIV~yidss~~~~~~~~~~~E 116 (738)
T KOG1989|consen 37 HRVTVEKVLAEGGFAQVYLAQDVKGGKKYALKRMYVNDEEALNAVKREIDIMKLLSGHKNIVSYIDSSAINRSSNNGVWE 116 (738)
T ss_pred EEEEEEEEEccCCcEEEEEEEecCCCceeeeeeeecCCHHHHHHHHHHHHHHHHhcCCCceeeEeccccccccCCCceeE
Confidence 445567789999999999999888889999999987788888999999998
Q ss_pred --------------HHhhc-CCcCCCHHHHHHHHHHHHHHHHHHhcCCc-ccccCCCCCceEEcCCceEEEeccccchh
Q psy6828 95 --------------DIMEN-EDVKLDNMFIASLVADILRGMLYLHDSAL-RYHGNLKASNCLVDSRWVVKLADFGLTEF 157 (392)
Q Consensus 95 --------------~~l~~-~~~~l~~~~~~~i~~qi~~~l~ylH~~~i-iiHrDlKp~NIll~~~~~~kl~DFGla~~ 157 (392)
++|+. .+..|++.++++|++|+++|+.+||.... |||||||-+|+||..+|+.||||||.+..
T Consensus 117 vllLmEyC~gg~Lvd~mn~Rlq~~lte~eVLkIf~dv~~AVa~mH~~~pPiIHRDLKiENvLls~~g~~KLCDFGSatt 195 (738)
T KOG1989|consen 117 VLLLMEYCKGGSLVDFMNTRLQTRLTEDEVLKIFYDVCEAVAAMHYLKPPIIHRDLKIENVLLSADGNYKLCDFGSATT 195 (738)
T ss_pred EEeehhhccCCcHHHHHHHHHhccCChHHHHHHHHHHHHHHHHHhcCCCccchhhhhhhheEEcCCCCEEeCccccccc
Confidence 33331 22259999999999999999999998763 49999999999999999999999999864
No 106
>cd07874 STKc_JNK3 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 3. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 3 (JNK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK3 is expressed primarily in the brain, and to a lesser extent in the heart and testis. Mice deficient in Jnk3 are protected against kainic acid-induced seizures, strok
Probab=99.82 E-value=2.1e-20 Score=179.96 Aligned_cols=134 Identities=22% Similarity=0.250 Sum_probs=103.4
Q ss_pred ceeeeccCCCCCcceeEEEEEEEeecCcEEEEEEcCCCCh--hHHHHHHHHHHH--------------------------
Q psy6828 43 SQVSLSSNPDSDFRYSAIFTPIGIYKGRIFAIKRIPKKSV--DITRAMKKELKI-------------------------- 94 (392)
Q Consensus 43 ~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~~--~~~~~~~~E~~~-------------------------- 94 (392)
.+.|...+.||+|+||.||++.+..+++.||||.+..... ...+.+.+|+.+
T Consensus 16 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~ 95 (355)
T cd07874 16 LKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKSLEEFQ 95 (355)
T ss_pred hhceeEEEEeeecCCEEEEEEEecCCCceEEEEEeCCcccChHHHHHHHHHHHHHHHhCCCchhceeeeeeccccccccc
Confidence 3456667789999999999999999999999999975432 334455666655
Q ss_pred ------HHhhc-----CCcCCCHHHHHHHHHHHHHHHHHHhcCCcccccCCCCCceEEcCCceEEEeccccchhccccc-
Q psy6828 95 ------DIMEN-----EDVKLDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLVDSRWVVKLADFGLTEFKRDAE- 162 (392)
Q Consensus 95 ------~~l~~-----~~~~l~~~~~~~i~~qi~~~l~ylH~~~iiiHrDlKp~NIll~~~~~~kl~DFGla~~~~~~~- 162 (392)
+++.. ....+++..+..++.|++.||.|||++++ +||||||+|||++.++.+||+|||+++......
T Consensus 96 ~~~lv~e~~~~~l~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~gi-vHrDikp~Nill~~~~~~kl~Dfg~~~~~~~~~~ 174 (355)
T cd07874 96 DVYLVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLHSAGI-IHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFM 174 (355)
T ss_pred eeEEEhhhhcccHHHHHhhcCCHHHHHHHHHHHHHHHHHHHhCCc-ccCCCChHHEEECCCCCEEEeeCcccccCCCccc
Confidence 11111 01137888899999999999999999999 999999999999999999999999997643221
Q ss_pred ---------------------cccccccceeeeeee
Q psy6828 163 ---------------------YTGTDQHSFLQHTYH 177 (392)
Q Consensus 163 ---------------------~~~~d~~s~g~~~~~ 177 (392)
....|+||+|+++|+
T Consensus 175 ~~~~~~t~~y~aPE~~~~~~~~~~~DiwslG~il~e 210 (355)
T cd07874 175 MTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGE 210 (355)
T ss_pred cCCccccCCccCHHHHcCCCCCchhhHHHHHHHHHH
Confidence 112388888888877
No 107
>cd05589 STKc_PKN Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase N. Serine/Threonine Kinases (STKs), Protein Kinase N (PKN) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKN subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKN has a C-terminal catalytic domain that is highly homologous to PKCs. Its unique N-terminal regulatory region contains antiparallel coiled-coil (ACC) domains. In mammals, there are three PKN isoforms from different genes (designated PKN-alpha, beta, and gamma), which show different enzymatic properties, tissue distribution, and varied functions. PKN can be activated by the small GTPase Rho, and by fatty acids such as arachidonic and linoleic acids. It is involved
Probab=99.82 E-value=1.7e-20 Score=178.34 Aligned_cols=108 Identities=23% Similarity=0.308 Sum_probs=88.1
Q ss_pred cCCCCCcceeEEEEEEEeecCcEEEEEEcCCCCh---hHHHHHHHHHHH-----------------------------HH
Q psy6828 49 SNPDSDFRYSAIFTPIGIYKGRIFAIKRIPKKSV---DITRAMKKELKI-----------------------------DI 96 (392)
Q Consensus 49 ~~~lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~~---~~~~~~~~E~~~-----------------------------~~ 96 (392)
.+.||+|+||.||++.+..+++.||||.+++... ...+.+.+|..+ ++
T Consensus 4 ~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~l~~e~~~~~~~~~l~hp~i~~~~~~~~~~~~~~lv~E~ 83 (324)
T cd05589 4 LAVLGRGHFGKVLLAEYKKTGELYAIKALKKGDIIARDEVESLMCEKRIFETANSERHPFLVNLFACFQTEDHVCFVMEY 83 (324)
T ss_pred EEEEeecCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccccCCCChhceeeEEEcCCEEEEEEcC
Confidence 4569999999999999999999999999975432 233455555443 22
Q ss_pred hhc-------CCcCCCHHHHHHHHHHHHHHHHHHhcCCcccccCCCCCceEEcCCceEEEeccccchh
Q psy6828 97 MEN-------EDVKLDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLVDSRWVVKLADFGLTEF 157 (392)
Q Consensus 97 l~~-------~~~~l~~~~~~~i~~qi~~~l~ylH~~~iiiHrDlKp~NIll~~~~~~kl~DFGla~~ 157 (392)
+.. ....+++.++..++.|++.||.|||++++ +||||||+||++++++.+||+|||+++.
T Consensus 84 ~~~~~L~~~~~~~~l~~~~~~~~~~qi~~al~~lH~~~i-vHrdlkp~Nill~~~~~~kL~Dfg~~~~ 150 (324)
T cd05589 84 AAGGDLMMHIHTDVFSEPRAVFYAACVVLGLQYLHENKI-VYRDLKLDNLLLDTEGFVKIADFGLCKE 150 (324)
T ss_pred CCCCcHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHhCCe-EecCCCHHHeEECCCCcEEeCcccCCcc
Confidence 221 12268999999999999999999999999 9999999999999999999999999864
No 108
>cd07875 STKc_JNK1 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 1. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 1 (JNK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn
Probab=99.82 E-value=2.7e-20 Score=179.89 Aligned_cols=134 Identities=22% Similarity=0.249 Sum_probs=104.9
Q ss_pred ceeeeccCCCCCcceeEEEEEEEeecCcEEEEEEcCCCCh--hHHHHHHHHHHH--------------------------
Q psy6828 43 SQVSLSSNPDSDFRYSAIFTPIGIYKGRIFAIKRIPKKSV--DITRAMKKELKI-------------------------- 94 (392)
Q Consensus 43 ~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~~--~~~~~~~~E~~~-------------------------- 94 (392)
.+.|...+.||+|+||.||++++..+++.||||++.+... ...+.+.+|+.+
T Consensus 23 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~ii~~~~~~~~~~~~~~~~ 102 (364)
T cd07875 23 LKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEEFQ 102 (364)
T ss_pred hcceeEEEEeecCCCeEEEEEEECCCCcEEEEEEeCccccCchhHHHHHHHHHHHHhcCCCCccccceeecccccccccC
Confidence 4567778899999999999999999999999999975422 333455666655
Q ss_pred ------HHhhc-----CCcCCCHHHHHHHHHHHHHHHHHHhcCCcccccCCCCCceEEcCCceEEEeccccchhccccc-
Q psy6828 95 ------DIMEN-----EDVKLDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLVDSRWVVKLADFGLTEFKRDAE- 162 (392)
Q Consensus 95 ------~~l~~-----~~~~l~~~~~~~i~~qi~~~l~ylH~~~iiiHrDlKp~NIll~~~~~~kl~DFGla~~~~~~~- 162 (392)
+++.. ....+++..+..++.|++.||.|||++++ +||||||+|||++.++.+||+|||+++......
T Consensus 103 ~~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~qi~~aL~~LH~~~i-vH~Dlkp~NIll~~~~~~kL~DfG~a~~~~~~~~ 181 (364)
T cd07875 103 DVYIVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLHSAGI-IHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFM 181 (364)
T ss_pred eEEEEEeCCCCCHHHHHHhcCCHHHHHHHHHHHHHHHHHHhhCCe-ecCCCCHHHEEECCCCcEEEEeCCCccccCCCCc
Confidence 00000 01136788899999999999999999999 999999999999999999999999997543221
Q ss_pred ---------------------cccccccceeeeeee
Q psy6828 163 ---------------------YTGTDQHSFLQHTYH 177 (392)
Q Consensus 163 ---------------------~~~~d~~s~g~~~~~ 177 (392)
....|+||+|+++|+
T Consensus 182 ~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~e 217 (364)
T cd07875 182 MTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGE 217 (364)
T ss_pred ccCCcccCCcCCHHHHhCCCCCchhhHHhHHHHHHH
Confidence 112499999999998
No 109
>KOG0586|consensus
Probab=99.81 E-value=3.8e-20 Score=178.94 Aligned_cols=132 Identities=22% Similarity=0.293 Sum_probs=113.9
Q ss_pred eeeeccCCCCCcceeEEEEEEEeecCcEEEEEEcCCCChh--HHHHHHHHHHH---------------------------
Q psy6828 44 QVSLSSNPDSDFRYSAIFTPIGIYKGRIFAIKRIPKKSVD--ITRAMKKELKI--------------------------- 94 (392)
Q Consensus 44 ~~~~~~~~lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~~~--~~~~~~~E~~~--------------------------- 94 (392)
..|...+.||+|.|++|.++++..++..||||.+++.... .+..+.+|+.+
T Consensus 56 g~y~i~~tig~g~f~~V~La~~~~t~~~VaiK~idkt~ln~~~~~k~~rev~imk~l~HPnIvkl~~v~~t~~~lylV~e 135 (596)
T KOG0586|consen 56 GLYVIIKTIGKGNFAKVKLARHILTGTEVAIKIIDKTQLNPSKRQKLGREVDIMKSLNHPNIVKLFSVIETEATLYLVME 135 (596)
T ss_pred cceeeeeeeccceeEEEEeeEecCCCceEEEEEehhcccChHHHHHHHHHHHHHHhcCCcceeeeeeeeeecceeEEEEE
Confidence 3466688899999999999999999999999999987763 34558888888
Q ss_pred --------HHhhcCCcCCCHHHHHHHHHHHHHHHHHHhcCCcccccCCCCCceEEcCCceEEEeccccchhcccccccc-
Q psy6828 95 --------DIMENEDVKLDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLVDSRWVVKLADFGLTEFKRDAEYTG- 165 (392)
Q Consensus 95 --------~~l~~~~~~l~~~~~~~i~~qi~~~l~ylH~~~iiiHrDlKp~NIll~~~~~~kl~DFGla~~~~~~~~~~- 165 (392)
+|+.+.+ ...+.++..++.|+.+|++|||++++ +|||||.+||||+.+.++||+|||++.++.......
T Consensus 136 ya~~ge~~~yl~~~g-r~~e~~ar~~F~q~vsaveYcH~k~i-vHrdLk~eNilL~~~mnikIaDfgfS~~~~~~~~lqt 213 (596)
T KOG0586|consen 136 YASGGELFDYLVKHG-RMKEKEARAKFRQIVSAVEYCHSKNI-VHRDLKAENILLDENMNIKIADFGFSTFFDYGLMLQT 213 (596)
T ss_pred eccCchhHHHHHhcc-cchhhhhhhhhHHHHHHHHHHhhcce-eccccchhhcccccccceeeeccccceeecccccccc
Confidence 6666665 57779999999999999999999999 999999999999999999999999999876443221
Q ss_pred ----------------------ccccceeeeeee
Q psy6828 166 ----------------------TDQHSFLQHTYH 177 (392)
Q Consensus 166 ----------------------~d~~s~g~~~~~ 177 (392)
.|+||+|+++|-
T Consensus 214 ~cgsppyAaPEl~~g~~y~gpe~D~Wslgvvly~ 247 (596)
T KOG0586|consen 214 FCGSPPYAAPELFNGKKYDGPEVDIWSLGVVLYA 247 (596)
T ss_pred cCCCCCccChHhhcCcccCCcceehhhhhhhhee
Confidence 299999999998
No 110
>cd07853 STKc_NLK Catalytic domain of the Serine/Threonine Kinase, Nemo-Like Kinase. Serine/Threonine Kinases (STKs), Nemo-Like Kinase (NLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mitogen-activated protein kinases (MAPKs) are important mediators of cellular responses to extracellular signals. NLK is an atypical MAPK that is not regulated by a MAPK kinase. It functions downstream of the MAPK kinase kinase Tak1, which also plays a role in activating the JNK and p38 MAPKs. The Tak1/NLK pathways are regulated by Wnts, a family of secreted proteins that is critical in the control of asymmetric division and cell polarity. NLK can phosphorylate transcription
Probab=99.81 E-value=4.4e-20 Score=178.95 Aligned_cols=129 Identities=26% Similarity=0.417 Sum_probs=102.0
Q ss_pred ccCCCCCcceeEEEEEEEeecCcEEEEEEcCCCC--hhHHHHHHHHHHH-------------H-----------------
Q psy6828 48 SSNPDSDFRYSAIFTPIGIYKGRIFAIKRIPKKS--VDITRAMKKELKI-------------D----------------- 95 (392)
Q Consensus 48 ~~~~lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~--~~~~~~~~~E~~~-------------~----------------- 95 (392)
..+.||+|+||.||++.+..+++.||||.+.... ....+.+.+|+.+ +
T Consensus 4 ~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~lv~ 83 (372)
T cd07853 4 PDRPIGYGAFGVVWSVTDPRDGKRVALKKMPNVFQNLVSCKRVFRELKMLCFFKHDNVLSALDILQPPHIDPFEEIYVVT 83 (372)
T ss_pred ccceeeeCCCEEEEEEEECCCCCEEEEEeccccccchHHHHHHHHHHHHHHhCCCCCcCCHhheecCCCccccceEEEEe
Confidence 3567999999999999999999999999987542 2334567777766 1
Q ss_pred -Hhhc-------CCcCCCHHHHHHHHHHHHHHHHHHhcCCcccccCCCCCceEEcCCceEEEeccccchhccccc-----
Q psy6828 96 -IMEN-------EDVKLDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLVDSRWVVKLADFGLTEFKRDAE----- 162 (392)
Q Consensus 96 -~l~~-------~~~~l~~~~~~~i~~qi~~~l~ylH~~~iiiHrDlKp~NIll~~~~~~kl~DFGla~~~~~~~----- 162 (392)
++.. ....+++..+..++.|++.||.|||++++ +||||||+|||++.++.+||+|||+++......
T Consensus 84 e~~~~~l~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~i-vH~dlkp~Nili~~~~~~kL~Dfg~a~~~~~~~~~~~~ 162 (372)
T cd07853 84 ELMQSDLHKIIVSPQPLSSDHVKVFLYQILRGLKYLHSAGI-LHRDIKPGNLLVNSNCVLKICDFGLARVEEPDESKHMT 162 (372)
T ss_pred eccccCHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCe-eCCCCChHHEEECCCCCEEeccccceeecccCccccCC
Confidence 1110 12358999999999999999999999999 999999999999999999999999987432110
Q ss_pred --------------------cccccccceeeeeee
Q psy6828 163 --------------------YTGTDQHSFLQHTYH 177 (392)
Q Consensus 163 --------------------~~~~d~~s~g~~~~~ 177 (392)
....|+||+|+++|+
T Consensus 163 ~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~e 197 (372)
T cd07853 163 QEVVTQYYRAPEILMGSRHYTSAVDIWSVGCIFAE 197 (372)
T ss_pred CCCcCCCcCCHHHHcCCCCCCcHHHHHhHHHHHHH
Confidence 112489999999888
No 111
>cd05624 STKc_MRCK_beta Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase beta. Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) beta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKbeta is expressed ubiquitously in many tissues.
Probab=99.81 E-value=4.4e-20 Score=176.08 Aligned_cols=111 Identities=18% Similarity=0.214 Sum_probs=90.9
Q ss_pred eccCCCCCcceeEEEEEEEeecCcEEEEEEcCCCCh---hHHHHHHHHHHH-----------------------------
Q psy6828 47 LSSNPDSDFRYSAIFTPIGIYKGRIFAIKRIPKKSV---DITRAMKKELKI----------------------------- 94 (392)
Q Consensus 47 ~~~~~lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~~---~~~~~~~~E~~~----------------------------- 94 (392)
...+.||+|+||.||++.+..+++.||+|.+.+... .....+.+|..+
T Consensus 4 ~i~~~lG~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~l~~~~~~~~~~~lv~Ey~ 83 (331)
T cd05624 4 EIIKVIGRGAFGEVAVVKMKHTERIYAMKILNKWEMLKRAETACFREERNVLVNGDCQWITTLHYAFQDENYLYLVMDYY 83 (331)
T ss_pred eEEEEEeeCCCeEEEEEEECCCCCEEEEEEEeHHHHHhhHHHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCEEEEEEeCC
Confidence 345679999999999999999999999999975322 223345556554
Q ss_pred ------HHhhcCCcCCCHHHHHHHHHHHHHHHHHHhcCCcccccCCCCCceEEcCCceEEEeccccchhc
Q psy6828 95 ------DIMENEDVKLDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLVDSRWVVKLADFGLTEFK 158 (392)
Q Consensus 95 ------~~l~~~~~~l~~~~~~~i~~qi~~~l~ylH~~~iiiHrDlKp~NIll~~~~~~kl~DFGla~~~ 158 (392)
+++......+++..+..++.|++.||.|||++++ +||||||+|||++.++.+||+|||+++..
T Consensus 84 ~gg~L~~~l~~~~~~l~~~~~~~~~~qi~~~L~~lH~~~i-iHrDlkp~Nill~~~~~~kl~DfG~a~~~ 152 (331)
T cd05624 84 VGGDLLTLLSKFEDRLPEDMARFYIAEMVLAIHSIHQLHY-VHRDIKPDNVLLDMNGHIRLADFGSCLKM 152 (331)
T ss_pred CCCcHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCe-eeccCchHHEEEcCCCCEEEEeccceeec
Confidence 3333333468999999999999999999999999 99999999999999999999999998654
No 112
>PLN00034 mitogen-activated protein kinase kinase; Provisional
Probab=99.81 E-value=2.9e-20 Score=178.92 Aligned_cols=111 Identities=29% Similarity=0.473 Sum_probs=92.2
Q ss_pred ccCCCCCcceeEEEEEEEeecCcEEEEEEcCCCCh-hHHHHHHHHHHH--------------------------HHhhcC
Q psy6828 48 SSNPDSDFRYSAIFTPIGIYKGRIFAIKRIPKKSV-DITRAMKKELKI--------------------------DIMENE 100 (392)
Q Consensus 48 ~~~~lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~~-~~~~~~~~E~~~--------------------------~~l~~~ 100 (392)
..+.||+|+||.||++.+..+++.||||.+..... ...+.+.+|+.+ +|+..+
T Consensus 78 ~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~ 157 (353)
T PLN00034 78 RVNRIGSGAGGTVYKVIHRPTGRLYALKVIYGNHEDTVRRQICREIEILRDVNHPNVVKCHDMFDHNGEIQVLLEFMDGG 157 (353)
T ss_pred hhhhccCCCCeEEEEEEECCCCCEEEEEEEecCCcHHHHHHHHHHHHHHHhCCCCCcceeeeEeccCCeEEEEEecCCCC
Confidence 35689999999999999999999999999965433 344567788776 343332
Q ss_pred Cc----CCCHHHHHHHHHHHHHHHHHHhcCCcccccCCCCCceEEcCCceEEEeccccchhcc
Q psy6828 101 DV----KLDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLVDSRWVVKLADFGLTEFKR 159 (392)
Q Consensus 101 ~~----~l~~~~~~~i~~qi~~~l~ylH~~~iiiHrDlKp~NIll~~~~~~kl~DFGla~~~~ 159 (392)
.+ ..++..+..++.||+.||.|||++++ +||||||+|||++.++.+||+|||+++...
T Consensus 158 ~L~~~~~~~~~~~~~i~~qi~~aL~~LH~~~i-vHrDlkp~NIll~~~~~~kL~DfG~~~~~~ 219 (353)
T PLN00034 158 SLEGTHIADEQFLADVARQILSGIAYLHRRHI-VHRDIKPSNLLINSAKNVKIADFGVSRILA 219 (353)
T ss_pred cccccccCCHHHHHHHHHHHHHHHHHHHHCCE-eecCCCHHHEEEcCCCCEEEcccccceecc
Confidence 22 36778888999999999999999999 999999999999999999999999987653
No 113
>cd05570 STKc_PKC Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase C. Serine/Threonine Kinases (STKs), Protein Kinase C (PKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, classical PKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. Novel PKCs are calcium-independent, but require DAG and PS for activity, while atypical PKCs only re
Probab=99.81 E-value=2.3e-20 Score=177.06 Aligned_cols=126 Identities=19% Similarity=0.245 Sum_probs=98.7
Q ss_pred CCCCcceeEEEEEEEeecCcEEEEEEcCCCCh---hHHHHHHHHHHH---------------------------HHhhc-
Q psy6828 51 PDSDFRYSAIFTPIGIYKGRIFAIKRIPKKSV---DITRAMKKELKI---------------------------DIMEN- 99 (392)
Q Consensus 51 ~lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~~---~~~~~~~~E~~~---------------------------~~l~~- 99 (392)
.||+|+||+||++.+..+++.||||.+++... ...+.+.+|..+ +++..
T Consensus 2 ~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~il~~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~~ 81 (318)
T cd05570 2 VLGKGSFGKVLLAELKGTDELYAVKVLKKDVILQDDDVECTMTEKRVLALAGKHPFLTQLHSCFQTKDRLFFVMEYVNGG 81 (318)
T ss_pred eeeeCCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhHHHHHHHHHHHHHhccCCCCccceeeEEEcCCEEEEEEcCCCCC
Confidence 58999999999999999999999999975432 223344555444 22211
Q ss_pred -------CCcCCCHHHHHHHHHHHHHHHHHHhcCCcccccCCCCCceEEcCCceEEEeccccchhcccc-----------
Q psy6828 100 -------EDVKLDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLVDSRWVVKLADFGLTEFKRDA----------- 161 (392)
Q Consensus 100 -------~~~~l~~~~~~~i~~qi~~~l~ylH~~~iiiHrDlKp~NIll~~~~~~kl~DFGla~~~~~~----------- 161 (392)
....+++.++..++.|++.||.|||++++ +||||||+||+++.++.+||+|||+++.....
T Consensus 82 ~L~~~~~~~~~l~~~~~~~~~~qi~~~l~~LH~~~i-vH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~~~~~~~~g~~ 160 (318)
T cd05570 82 DLMFHIQRSGRFDEPRARFYAAEIVLGLQFLHERGI-IYRDLKLDNVLLDSEGHIKIADFGMCKEGILGGVTTSTFCGTP 160 (318)
T ss_pred CHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHhCCe-EccCCCHHHeEECCCCcEEecccCCCeecCcCCCcccceecCc
Confidence 12268999999999999999999999999 99999999999999999999999988642110
Q ss_pred ------------ccccccccceeeeeee
Q psy6828 162 ------------EYTGTDQHSFLQHTYH 177 (392)
Q Consensus 162 ------------~~~~~d~~s~g~~~~~ 177 (392)
.....|+||+|+++|+
T Consensus 161 ~y~aPE~~~~~~~~~~~DiwslGvil~~ 188 (318)
T cd05570 161 DYIAPEILSYQPYGPAVDWWALGVLLYE 188 (318)
T ss_pred cccCHHHhcCCCCCcchhhhhHHHHHHH
Confidence 0123499999999998
No 114
>KOG0589|consensus
Probab=99.81 E-value=1.5e-20 Score=178.68 Aligned_cols=131 Identities=20% Similarity=0.283 Sum_probs=108.8
Q ss_pred eeccCCCCCcceeEEEEEEEeecCcEEEEEEcCCCCh--hHHHHHHHHHHH---------------------------HH
Q psy6828 46 SLSSNPDSDFRYSAIFTPIGIYKGRIFAIKRIPKKSV--DITRAMKKELKI---------------------------DI 96 (392)
Q Consensus 46 ~~~~~~lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~~--~~~~~~~~E~~~---------------------------~~ 96 (392)
|...+.+|+|+||.+++++++.+++.|++|.+.-... ...+...+|..+ +|
T Consensus 6 Ye~~~~iG~GafG~a~lvrhk~~~~~~vlK~I~l~~~t~~~r~~A~~E~~lis~~~hP~iv~y~ds~~~~~~~l~Ivm~Y 85 (426)
T KOG0589|consen 6 YEVLRQVGRGAFGSALLVRHKSDDKLYVLKKINLEKLTEPERRSAIQEMDLLSKLLHPNIVEYKDSFEEDGQLLCIVMEY 85 (426)
T ss_pred hhhhhhcCccccchhhhhhhccCCceEEEEEEeccccCchhhHHHHHHHHHHHhccCCCeeeeccchhcCCceEEEEEee
Confidence 4557889999999999999999999999999976554 233456677766 12
Q ss_pred h----------hcCCcCCCHHHHHHHHHHHHHHHHHHhcCCcccccCCCCCceEEcCCceEEEeccccchhccccc-cc-
Q psy6828 97 M----------ENEDVKLDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLVDSRWVVKLADFGLTEFKRDAE-YT- 164 (392)
Q Consensus 97 l----------~~~~~~l~~~~~~~i~~qi~~~l~ylH~~~iiiHrDlKp~NIll~~~~~~kl~DFGla~~~~~~~-~~- 164 (392)
. +.+...|+++.+..|+.|++.|+.|||++.| +|||||+.||+++.++.+||+|||+|+...... ..
T Consensus 86 ~eGg~l~~~i~~~k~~~f~E~~i~~~~~Q~~~av~ylH~~~i-LHRDlK~~Nifltk~~~VkLgDfGlaK~l~~~~~~a~ 164 (426)
T KOG0589|consen 86 CEGGDLAQLIKEQKGVLFPEERILKWFVQILLAVNYLHENRV-LHRDLKCANIFLTKDKKVKLGDFGLAKILNPEDSLAS 164 (426)
T ss_pred cCCCCHHHHHHHHhhccccHHHHHHHHHHHHHHHHHHHhhhh-hcccchhhhhhccccCceeecchhhhhhcCCchhhhh
Confidence 1 2233469999999999999999999999999 999999999999999999999999999887654 11
Q ss_pred ---------------------cccccceeeeeee
Q psy6828 165 ---------------------GTDQHSFLQHTYH 177 (392)
Q Consensus 165 ---------------------~~d~~s~g~~~~~ 177 (392)
..|+||+||++||
T Consensus 165 tvvGTp~YmcPEil~d~pYn~KSDiWsLGC~~yE 198 (426)
T KOG0589|consen 165 TVVGTPYYMCPEILSDIPYNEKSDIWSLGCCLYE 198 (426)
T ss_pred eecCCCcccCHHHhCCCCCCccCcchhhcchHHH
Confidence 2399999999999
No 115
>cd05582 STKc_RSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, 90 kDa ribosomal protein S6 kinase. Serine/Threonine Kinases (STKs), 90 kDa ribosomal protein S6 kinase (RSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. RSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family. They are activated by signaling inputs from extracellular regulated kinase (ERK) and phosphoinositide dependent kinase 1 (PDK1). ERK phosphorylates and activates the CTD of RSK, serving as a docking site for PDK1, which phosphorylates and activates the NTD, which in turn phosphorylate
Probab=99.81 E-value=1.1e-19 Score=172.34 Aligned_cols=127 Identities=24% Similarity=0.304 Sum_probs=99.5
Q ss_pred CCCCCcceeEEEEEEEe---ecCcEEEEEEcCCCCh--hHHHHHHHHHHH--------------------------HHhh
Q psy6828 50 NPDSDFRYSAIFTPIGI---YKGRIFAIKRIPKKSV--DITRAMKKELKI--------------------------DIME 98 (392)
Q Consensus 50 ~~lg~G~~g~V~~~~~~---~~~~~vAiK~~~~~~~--~~~~~~~~E~~~--------------------------~~l~ 98 (392)
+.||+|+||.||++.+. .+|+.||+|++.+... .....+.+|+.+ +++.
T Consensus 2 ~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~ 81 (318)
T cd05582 2 KVLGQGSFGKVFLVRKITGPDAGQLYAMKVLKKATLKVRDRVRTKMERDILAEVNHPFIVKLHYAFQTEGKLYLILDFLR 81 (318)
T ss_pred ceeeeCCCEEEEEEEEeccCCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHhCCCCCcccEEEEEEcCCEEEEEEcCCC
Confidence 46899999999998764 5789999999975432 223345566655 2222
Q ss_pred c--------CCcCCCHHHHHHHHHHHHHHHHHHhcCCcccccCCCCCceEEcCCceEEEeccccchhccccc--------
Q psy6828 99 N--------EDVKLDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLVDSRWVVKLADFGLTEFKRDAE-------- 162 (392)
Q Consensus 99 ~--------~~~~l~~~~~~~i~~qi~~~l~ylH~~~iiiHrDlKp~NIll~~~~~~kl~DFGla~~~~~~~-------- 162 (392)
. ....+++..+..++.|++.||.|||++++ +||||||+|||++.++.+||+|||+++......
T Consensus 82 ~~~L~~~l~~~~~l~~~~~~~~~~qi~~~l~~lH~~~i-~H~dlkp~Nil~~~~~~~kL~Dfg~~~~~~~~~~~~~~~~g 160 (318)
T cd05582 82 GGDLFTRLSKEVMFTEEDVKFYLAELALALDHLHSLGI-IYRDLKPENILLDEEGHIKLTDFGLSKESIDHEKKAYSFCG 160 (318)
T ss_pred CCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCE-ecCCCCHHHeEECCCCcEEEeeccCCcccCCCCCceecccC
Confidence 1 12258999999999999999999999999 999999999999999999999999987542220
Q ss_pred ---------------cccccccceeeeeee
Q psy6828 163 ---------------YTGTDQHSFLQHTYH 177 (392)
Q Consensus 163 ---------------~~~~d~~s~g~~~~~ 177 (392)
....|+||+|+++|+
T Consensus 161 ~~~y~aPE~~~~~~~~~~~DiwslG~il~e 190 (318)
T cd05582 161 TVEYMAPEVVNRRGHTQSADWWSFGVLMFE 190 (318)
T ss_pred ChhhcCHHHHcCCCCCCccceeccceEeee
Confidence 123499999999999
No 116
>cd05584 STKc_p70S6K Catalytic domain of the Protein Serine/Threonine Kinase, 70 kDa ribosomal protein S6 kinase. Serine/Threonine Kinases (STKs), 70 kDa ribosomal protein S6 kinase (p70S6K) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p70S6K subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p70S6K (or S6K) contains only one catalytic kinase domain, unlike p90 ribosomal S6 kinases (RSKs). It acts as a downstream effector of the STK mTOR (mammalian Target of Rapamycin) and plays a role in the regulation of the translation machinery during protein synthesis. p70S6K also plays a pivotal role in regulating cell size and glucose homeostasis. Its targets include S6, the translation initiation factor eIF3, and the in
Probab=99.81 E-value=6.5e-20 Score=174.30 Aligned_cols=106 Identities=26% Similarity=0.314 Sum_probs=85.6
Q ss_pred CCCCCcceeEEEEEEEe---ecCcEEEEEEcCCCCh----hHHHHHHHHHHH----------------------------
Q psy6828 50 NPDSDFRYSAIFTPIGI---YKGRIFAIKRIPKKSV----DITRAMKKELKI---------------------------- 94 (392)
Q Consensus 50 ~~lg~G~~g~V~~~~~~---~~~~~vAiK~~~~~~~----~~~~~~~~E~~~---------------------------- 94 (392)
+.||+|+||.||++.+. .+++.||+|.+.+... .....+.+|+.+
T Consensus 2 ~~lg~G~~g~V~~~~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~~~~~~~~~~~~~lv~e~ 81 (323)
T cd05584 2 KVLGKGGYGKVFQVRKVTGADTGKIFAMKVLKKATIVRNQKDTAHTKAERNILEAVKHPFIVDLIYAFQTGGKLYLILEY 81 (323)
T ss_pred ceeeecCCeEEEEEEEcccCCCCCEEEEEEEEHHHHHhhhhhHHHHHHHHHHHHhCCCCchhceeeEEecCCeEEEEEeC
Confidence 46899999999999864 4688999999975322 223445667665
Q ss_pred -------HHhhcCCcCCCHHHHHHHHHHHHHHHHHHhcCCcccccCCCCCceEEcCCceEEEeccccchh
Q psy6828 95 -------DIMENEDVKLDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLVDSRWVVKLADFGLTEF 157 (392)
Q Consensus 95 -------~~l~~~~~~l~~~~~~~i~~qi~~~l~ylH~~~iiiHrDlKp~NIll~~~~~~kl~DFGla~~ 157 (392)
+++.. ...+++..+..++.|++.||.|||++++ +||||||+|||++.++.+||+|||+++.
T Consensus 82 ~~~~~L~~~~~~-~~~~~~~~~~~~~~qi~~~l~~lH~~~i-vH~dlkp~Nil~~~~~~~kl~Dfg~~~~ 149 (323)
T cd05584 82 LSGGELFMHLER-EGIFMEDTACFYLSEISLALEHLHQQGI-IYRDLKPENILLDAQGHVKLTDFGLCKE 149 (323)
T ss_pred CCCchHHHHHHH-cCCCCHHHHHHHHHHHHHHHHHHHHCCe-ecCCCCHHHeEECCCCCEEEeeCcCCee
Confidence 22222 2257888999999999999999999999 9999999999999999999999999864
No 117
>KOG1006|consensus
Probab=99.81 E-value=9.3e-21 Score=165.92 Aligned_cols=137 Identities=18% Similarity=0.275 Sum_probs=104.9
Q ss_pred ccCCCCCcceeEEEEEEEeecCcEEEEEEcCCCCh-hHHHHHHHHHHH---------------------------HHhh-
Q psy6828 48 SSNPDSDFRYSAIFTPIGIYKGRIFAIKRIPKKSV-DITRAMKKELKI---------------------------DIME- 98 (392)
Q Consensus 48 ~~~~lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~~-~~~~~~~~E~~~---------------------------~~l~- 98 (392)
....+|.|+||+|++-.++.+|+..|||.++.... ...++++.|... ++|.
T Consensus 68 dlg~iG~G~fG~V~KM~hk~sg~~mAVKrIr~~n~~keq~rll~e~d~~mks~~cp~IVkfyGa~F~EGdcWiCMELMd~ 147 (361)
T KOG1006|consen 68 DLGEIGNGAFGTVNKMLHKPSGKLMAVKRIRSNNIEKEQKRLLMEHDTVMKSSNCPNIVKFYGALFSEGDCWICMELMDI 147 (361)
T ss_pred HHHHhcCCcchhhhhhhcCccCcEEEEEEeeeccchHHHHHHHHHHHHHHhhcCCcHHHHHhhhhhcCCceeeeHHHHhh
Confidence 35789999999999999999999999999987665 445667777665 1110
Q ss_pred -----------cCCcCCCHHHHHHHHHHHHHHHHHHhc-CCcccccCCCCCceEEcCCceEEEeccccchhccccc----
Q psy6828 99 -----------NEDVKLDNMFIASLVADILRGMLYLHD-SALRYHGNLKASNCLVDSRWVVKLADFGLTEFKRDAE---- 162 (392)
Q Consensus 99 -----------~~~~~l~~~~~~~i~~qi~~~l~ylH~-~~iiiHrDlKp~NIll~~~~~~kl~DFGla~~~~~~~---- 162 (392)
-.+..++|.-+-.|..-.+.||.||-+ ..+ ||||+||+|||++..|.+||||||++..+.++.
T Consensus 148 SlDklYk~vy~vq~~~ipE~Ilg~ItvatV~AL~yLK~~lki-IHRDvKPSNILldr~G~vKLCDFGIcGqLv~SiAkT~ 226 (361)
T KOG1006|consen 148 SLDKLYKRVYSVQKSRIPENILGHITVATVDALDYLKEELKI-IHRDVKPSNILLDRHGDVKLCDFGICGQLVDSIAKTV 226 (361)
T ss_pred hHHHHHHHHHHHHhccCcHhhhhheeeeehhHHHHHHHHhhh-hhccCChhheEEecCCCEeeecccchHhHHHHHHhhh
Confidence 112246777667777777899999996 456 999999999999999999999999987543211
Q ss_pred --------------------cccccccceeeeeee--ccCCCCcc
Q psy6828 163 --------------------YTGTDQHSFLQHTYH--VNRAGSTE 185 (392)
Q Consensus 163 --------------------~~~~d~~s~g~~~~~--~~~~~~~~ 185 (392)
...+|+||+|+++|| +..|++.+
T Consensus 227 daGCrpYmAPERi~p~~~gyDiRSDvWSLGITL~EvAtG~fPyr~ 271 (361)
T KOG1006|consen 227 DAGCRPYMAPERIDPSDKGYDIRSDVWSLGITLYEVATGNFPYRK 271 (361)
T ss_pred ccCCccccChhccCCccCCcchhhhhhhhcceEeeeecCCCCcch
Confidence 112499999999999 45577655
No 118
>cd05592 STKc_nPKC_theta_delta Catalytic domain of the Protein Serine/Threonine Kinases, Novel Protein Kinase C theta and delta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta and delta-like isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an imp
Probab=99.81 E-value=6.5e-20 Score=173.79 Aligned_cols=107 Identities=22% Similarity=0.320 Sum_probs=85.3
Q ss_pred CCCCcceeEEEEEEEeecCcEEEEEEcCCCCh---hHHHHHHHHHHH---------------------------HHhhc-
Q psy6828 51 PDSDFRYSAIFTPIGIYKGRIFAIKRIPKKSV---DITRAMKKELKI---------------------------DIMEN- 99 (392)
Q Consensus 51 ~lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~~---~~~~~~~~E~~~---------------------------~~l~~- 99 (392)
.||+|+||+||++.+..+++.||+|.+++... ...+....|..+ +++..
T Consensus 2 ~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~hp~i~~~~~~~~~~~~~~lv~e~~~gg 81 (316)
T cd05592 2 VLGKGSFGKVMLAELKGTNEFFAIKALKKDVVLEDDDVECTMVERRVLALAWEHPFLTHLFCTFQTKEHLFFVMEYLNGG 81 (316)
T ss_pred eeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhccCCCCccceeeEEEcCCEEEEEEcCCCCC
Confidence 58999999999999999999999999975421 122233333332 22211
Q ss_pred -------CCcCCCHHHHHHHHHHHHHHHHHHhcCCcccccCCCCCceEEcCCceEEEeccccchhc
Q psy6828 100 -------EDVKLDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLVDSRWVVKLADFGLTEFK 158 (392)
Q Consensus 100 -------~~~~l~~~~~~~i~~qi~~~l~ylH~~~iiiHrDlKp~NIll~~~~~~kl~DFGla~~~ 158 (392)
....+++..+..++.|++.||.|||++++ +||||||+|||++.++.+||+|||+++..
T Consensus 82 ~L~~~~~~~~~~~~~~~~~~~~qi~~al~~LH~~~i-vH~dlkp~Nill~~~~~~kL~Dfg~a~~~ 146 (316)
T cd05592 82 DLMFHIQSSGRFDEARARFYAAEIICGLQFLHKKGI-IYRDLKLDNVLLDKDGHIKIADFGMCKEN 146 (316)
T ss_pred cHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCE-EeCCCCHHHeEECCCCCEEEccCcCCeEC
Confidence 12268999999999999999999999999 99999999999999999999999998753
No 119
>cd07872 STKc_PCTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-2 kinase. Serine/Threonine Kinases (STKs), PCTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-2 is specifically expressed in neurons in the central nervous system, mainly in terminally differentiated neurons. It associates with Trap (Tudor repeat associator with PCTAIRE-2) and could play
Probab=99.81 E-value=3.6e-20 Score=174.82 Aligned_cols=112 Identities=24% Similarity=0.364 Sum_probs=91.8
Q ss_pred eeccCCCCCcceeEEEEEEEeecCcEEEEEEcCCCCh-hHHHHHHHHHHH------------------------------
Q psy6828 46 SLSSNPDSDFRYSAIFTPIGIYKGRIFAIKRIPKKSV-DITRAMKKELKI------------------------------ 94 (392)
Q Consensus 46 ~~~~~~lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~~-~~~~~~~~E~~~------------------------------ 94 (392)
|...+.||+|+||.||++.+..+++.||+|.++.... .....+.+|+.+
T Consensus 8 y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~ 87 (309)
T cd07872 8 YIKLEKLGEGTYATVFKGRSKLTENLVALKEIRLEHEEGAPCTAIREVSLLKDLKHANIVTLHDIVHTDKSLTLVFEYLD 87 (309)
T ss_pred eEEEEEecccCCEEEEEEEecCCCCeEEEEEeeccccCCcchhHHHHHHHHHhCCCCCcceEEEEEeeCCeEEEEEeCCC
Confidence 5566789999999999999999999999999875432 222345566665
Q ss_pred ----HHhhcCCcCCCHHHHHHHHHHHHHHHHHHhcCCcccccCCCCCceEEcCCceEEEeccccchhc
Q psy6828 95 ----DIMENEDVKLDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLVDSRWVVKLADFGLTEFK 158 (392)
Q Consensus 95 ----~~l~~~~~~l~~~~~~~i~~qi~~~l~ylH~~~iiiHrDlKp~NIll~~~~~~kl~DFGla~~~ 158 (392)
+++......+++..+..++.|++.||.|||++++ +||||||+||+++.++.+||+|||+++..
T Consensus 88 ~~l~~~~~~~~~~~~~~~~~~~~~qi~~aL~~lH~~~i-vH~dlkp~Nill~~~~~~kl~Dfg~~~~~ 154 (309)
T cd07872 88 KDLKQYMDDCGNIMSMHNVKIFLYQILRGLAYCHRRKV-LHRDLKPQNLLINERGELKLADFGLARAK 154 (309)
T ss_pred CCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCe-ecCCCCHHHEEECCCCCEEECccccceec
Confidence 2333333358899999999999999999999999 99999999999999999999999998653
No 120
>KOG0032|consensus
Probab=99.81 E-value=5.4e-20 Score=176.54 Aligned_cols=116 Identities=24% Similarity=0.360 Sum_probs=99.0
Q ss_pred cceeeeccCCCCCcceeEEEEEEEeecCcEEEEEEcCCCChh---HHHHHHHHHHH------------------------
Q psy6828 42 TSQVSLSSNPDSDFRYSAIFTPIGIYKGRIFAIKRIPKKSVD---ITRAMKKELKI------------------------ 94 (392)
Q Consensus 42 ~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~~~---~~~~~~~E~~~------------------------ 94 (392)
....|...+.||+|.||.||+|.++.+|+.+|+|.+.+.... ..+.+.+|+.+
T Consensus 33 ~~~~Y~l~~~lG~G~Fg~v~~~~~~~tg~~~A~K~i~k~~~~~~~~~~~v~~Ev~il~~l~~hpniv~l~~~~e~~~~~~ 112 (382)
T KOG0032|consen 33 IKEKYELGRELGRGQFGVVYLCREKSTGKEVACKVIPKRKLRGKEDREDVRREVAILQQLSGHPNIVQLKDAFEDPDSVY 112 (382)
T ss_pred ccccEEehhhhCCCCceEEEEEEecCCCceeEEEEeehhhccccccHHHHHHHHHHHHhccCCCCEEEEEEEEEcCCeEE
Confidence 455677789999999999999999999999999999887663 34578888888
Q ss_pred ------------HHhhcCCcCCCHHHHHHHHHHHHHHHHHHhcCCcccccCCCCCceEEcCC----ceEEEeccccchhc
Q psy6828 95 ------------DIMENEDVKLDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLVDSR----WVVKLADFGLTEFK 158 (392)
Q Consensus 95 ------------~~l~~~~~~l~~~~~~~i~~qi~~~l~ylH~~~iiiHrDlKp~NIll~~~----~~~kl~DFGla~~~ 158 (392)
+.+... .+++..+..+++|++.++.|||+.|+ +||||||+|+|+... +.+|++|||++...
T Consensus 113 lvmEL~~GGeLfd~i~~~--~~sE~da~~~~~~il~av~~lH~~gv-vHrDlKpEN~L~~~~~~~~~~ik~~DFGla~~~ 189 (382)
T KOG0032|consen 113 LVMELCEGGELFDRIVKK--HYSERDAAGIIRQILEAVKYLHSLGV-VHRDLKPENLLLASKDEGSGRIKLIDFGLAKFI 189 (382)
T ss_pred EEEEecCCchHHHHHHHc--cCCHHHHHHHHHHHHHHHHHHHhCCc-eeccCCHHHeeeccccCCCCcEEEeeCCCceEc
Confidence 111112 29999999999999999999999999 999999999999644 47999999999987
Q ss_pred cc
Q psy6828 159 RD 160 (392)
Q Consensus 159 ~~ 160 (392)
..
T Consensus 190 ~~ 191 (382)
T KOG0032|consen 190 KP 191 (382)
T ss_pred cC
Confidence 76
No 121
>PTZ00284 protein kinase; Provisional
Probab=99.81 E-value=4.6e-20 Score=184.11 Aligned_cols=132 Identities=19% Similarity=0.194 Sum_probs=97.0
Q ss_pred ceeeeccCCCCCcceeEEEEEEEeecCcEEEEEEcCCCChhHHHHHHHHHHH----------------------------
Q psy6828 43 SQVSLSSNPDSDFRYSAIFTPIGIYKGRIFAIKRIPKKSVDITRAMKKELKI---------------------------- 94 (392)
Q Consensus 43 ~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~~~~~~~~~~E~~~---------------------------- 94 (392)
...|...+.||+|+||+||++.+..+++.||||+++.... .......|+.+
T Consensus 128 ~~~y~i~~~lG~G~fg~V~~a~~~~~~~~vAvK~i~~~~~-~~~~~~~e~~~l~~l~~~~~~~~~~i~~i~~~~~~~~~~ 206 (467)
T PTZ00284 128 TQRFKILSLLGEGTFGKVVEAWDRKRKEYCAVKIVRNVPK-YTRDAKIEIQFMEKVRQADPADRFPLMKIQRYFQNETGH 206 (467)
T ss_pred CCcEEEEEEEEeccCEEEEEEEEcCCCeEEEEEEEecchh-hHHHHHHHHHHHHHHhhcCcccCcceeeeEEEEEcCCce
Confidence 3456677889999999999999999999999999964321 11122222222
Q ss_pred -------------HHhhcCCcCCCHHHHHHHHHHHHHHHHHHhc-CCcccccCCCCCceEEcCCc---------------
Q psy6828 95 -------------DIMENEDVKLDNMFIASLVADILRGMLYLHD-SALRYHGNLKASNCLVDSRW--------------- 145 (392)
Q Consensus 95 -------------~~l~~~~~~l~~~~~~~i~~qi~~~l~ylH~-~~iiiHrDlKp~NIll~~~~--------------- 145 (392)
+++... ..+++..+..++.||+.||.|||+ .++ +||||||+|||++.++
T Consensus 207 ~~iv~~~~g~~l~~~l~~~-~~l~~~~~~~i~~qi~~aL~yLH~~~gI-iHrDlKP~NILl~~~~~~~~~~~~~~~~~~~ 284 (467)
T PTZ00284 207 MCIVMPKYGPCLLDWIMKH-GPFSHRHLAQIIFQTGVALDYFHTELHL-MHTDLKPENILMETSDTVVDPVTNRALPPDP 284 (467)
T ss_pred EEEEEeccCCCHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHhcCCe-ecCCCCHHHEEEecCCcccccccccccCCCC
Confidence 112111 258999999999999999999998 599 9999999999998765
Q ss_pred -eEEEeccccchhccccc--------------------cccccccceeeeeee
Q psy6828 146 -VVKLADFGLTEFKRDAE--------------------YTGTDQHSFLQHTYH 177 (392)
Q Consensus 146 -~~kl~DFGla~~~~~~~--------------------~~~~d~~s~g~~~~~ 177 (392)
.+||+|||++....... ....|+||+|+++|+
T Consensus 285 ~~vkl~DfG~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~DiwSlGvil~e 337 (467)
T PTZ00284 285 CRVRICDLGGCCDERHSRTAIVSTRHYRSPEVVLGLGWMYSTDMWSMGCIIYE 337 (467)
T ss_pred ceEEECCCCccccCccccccccCCccccCcHHhhcCCCCcHHHHHHHHHHHHH
Confidence 49999999875422111 112388888888888
No 122
>PHA03209 serine/threonine kinase US3; Provisional
Probab=99.81 E-value=3.4e-20 Score=178.74 Aligned_cols=113 Identities=16% Similarity=0.155 Sum_probs=90.1
Q ss_pred eeeccCCCCCcceeEEEEEEEeecCcEEEEEEcCCCChhHHHHHHHHHHH----------------------------HH
Q psy6828 45 VSLSSNPDSDFRYSAIFTPIGIYKGRIFAIKRIPKKSVDITRAMKKELKI----------------------------DI 96 (392)
Q Consensus 45 ~~~~~~~lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~~~~~~~~~~E~~~----------------------------~~ 96 (392)
.|...+.||+|+||.||+|.+..+++.||+|...+........+.+.+.. ++
T Consensus 67 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~valK~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~l~~~ 146 (357)
T PHA03209 67 GYTVIKTLTPGSEGRVFVATKPGQPDPVVLKIGQKGTTLIEAMLLQNVNHPSVIRMKDTLVSGAITCMVLPHYSSDLYTY 146 (357)
T ss_pred CcEEEEEecCCCCeEEEEEEECCCCceEEEEeCCccccHHHHHHHHhCCCCCCcChhheEEeCCeeEEEEEccCCcHHHH
Confidence 36667889999999999999999999999998755432211111111111 44
Q ss_pred hhcCCcCCCHHHHHHHHHHHHHHHHHHhcCCcccccCCCCCceEEcCCceEEEeccccchhc
Q psy6828 97 MENEDVKLDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLVDSRWVVKLADFGLTEFK 158 (392)
Q Consensus 97 l~~~~~~l~~~~~~~i~~qi~~~l~ylH~~~iiiHrDlKp~NIll~~~~~~kl~DFGla~~~ 158 (392)
+.+....+++.++..++.|++.||.|||++++ +||||||+|||++.++.+||+|||+++..
T Consensus 147 l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~i-vHrDlkp~Nill~~~~~~kl~DfG~a~~~ 207 (357)
T PHA03209 147 LTKRSRPLPIDQALIIEKQILEGLRYLHAQRI-IHRDVKTENIFINDVDQVCIGDLGAAQFP 207 (357)
T ss_pred HHhccCCCCHHHHHHHHHHHHHHHHHHHHCCe-ecCCCCHHHEEECCCCCEEEecCcccccc
Confidence 44445579999999999999999999999999 99999999999999999999999998753
No 123
>cd07863 STKc_CDK4 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 4. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 partners with all three D-type cyclins (D1, D2, and D3) and is also regulated by INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein and plays a role in regulating the early G1 phase of the cell cycle. It is expressed ubiquitou
Probab=99.81 E-value=5.6e-20 Score=171.42 Aligned_cols=113 Identities=25% Similarity=0.353 Sum_probs=87.3
Q ss_pred eeccCCCCCcceeEEEEEEEeecCcEEEEEEcCCCCh--hHHHHHHHHHHH-----------------------------
Q psy6828 46 SLSSNPDSDFRYSAIFTPIGIYKGRIFAIKRIPKKSV--DITRAMKKELKI----------------------------- 94 (392)
Q Consensus 46 ~~~~~~lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~~--~~~~~~~~E~~~----------------------------- 94 (392)
|...+.||+|+||+||++.+..+++.||+|.++.... .....+.+|+.+
T Consensus 2 y~~~~~lg~g~~g~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~ni~~~~~~~~~~~~~~~~~ 81 (288)
T cd07863 2 YEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVQTNEDGLPLSTVREVALLKRLEAFDHPNIVRLMDVCATSRTDRETK 81 (288)
T ss_pred ceEeeEEeecCCeEEEEEEECCCCcEEEEEEeccCcCCCCCchHHHHHHHHHHHhhhcCCCCeeeeeeeeccccCCCCce
Confidence 3445679999999999999999999999999865321 111112223222
Q ss_pred -------------HHhhc-CCcCCCHHHHHHHHHHHHHHHHHHhcCCcccccCCCCCceEEcCCceEEEeccccchhcc
Q psy6828 95 -------------DIMEN-EDVKLDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLVDSRWVVKLADFGLTEFKR 159 (392)
Q Consensus 95 -------------~~l~~-~~~~l~~~~~~~i~~qi~~~l~ylH~~~iiiHrDlKp~NIll~~~~~~kl~DFGla~~~~ 159 (392)
+++.. ....+++.++..++.|++.||.|||++++ +||||||+|||++.++.+||+|||+++...
T Consensus 82 ~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~i-vH~dikp~Nili~~~~~~kl~dfg~~~~~~ 159 (288)
T cd07863 82 VTLVFEHVDQDLRTYLDKVPPPGLPAETIKDLMRQFLRGLDFLHANCI-VHRDLKPENILVTSGGQVKLADFGLARIYS 159 (288)
T ss_pred EEEEEcccccCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCe-ecCCCCHHHEEECCCCCEEECccCcccccc
Confidence 12221 11248999999999999999999999999 999999999999999999999999987653
No 124
>KOG0607|consensus
Probab=99.81 E-value=4e-20 Score=165.75 Aligned_cols=110 Identities=25% Similarity=0.368 Sum_probs=93.6
Q ss_pred eccCCCCCcceeEEEEEEEeecCcEEEEEEcCCCChhHHHHHHHHHHH--------------HHhhc-------------
Q psy6828 47 LSSNPDSDFRYSAIFTPIGIYKGRIFAIKRIPKKSVDITRAMKKELKI--------------DIMEN------------- 99 (392)
Q Consensus 47 ~~~~~lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~~~~~~~~~~E~~~--------------~~l~~------------- 99 (392)
++...||+|+|+.|--|....+|..||||++.+..-....++.+|+++ ++++.
T Consensus 81 Lt~e~LGeGAyasVqtcv~i~t~~EYAVKiidKq~gHsR~RvfREVe~f~~Cqgh~nilqLiefFEdd~~FYLVfEKm~G 160 (463)
T KOG0607|consen 81 LTSELLGEGAYASVQTCVSIQTGKEYAVKIIDKQPGHSRSRVFREVETFYQCQGHKNILQLIEFFEDDTRFYLVFEKMRG 160 (463)
T ss_pred hHHHHhcCccceeeeeeeeeccchhhhhhhhhcCCchHHHHHHHHHHHHHHhcCCccHHHHHHHhcccceEEEEEecccC
Confidence 347789999999999999999999999999999877888899999988 22111
Q ss_pred --------CCcCCCHHHHHHHHHHHHHHHHHHhcCCcccccCCCCCceEEcCCc---eEEEeccccchh
Q psy6828 100 --------EDVKLDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLVDSRW---VVKLADFGLTEF 157 (392)
Q Consensus 100 --------~~~~l~~~~~~~i~~qi~~~l~ylH~~~iiiHrDlKp~NIll~~~~---~~kl~DFGla~~ 157 (392)
....|++.++..++++|+.||.|||.+|| .||||||+|||-.+.. -+|||||.+..-
T Consensus 161 GplLshI~~~~~F~E~EAs~vvkdia~aLdFlH~kgI-AHRDlKPENiLC~~pn~vsPvKiCDfDLgSg 228 (463)
T KOG0607|consen 161 GPLLSHIQKRKHFNEREASRVVKDIASALDFLHTKGI-AHRDLKPENILCESPNKVSPVKICDFDLGSG 228 (463)
T ss_pred chHHHHHHHhhhccHHHHHHHHHHHHHHHHHHhhcCc-ccccCCccceeecCCCCcCceeeeccccccc
Confidence 11159999999999999999999999999 9999999999986543 489999987643
No 125
>cd05619 STKc_nPKC_theta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C theta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an important and non-redundant role in
Probab=99.80 E-value=6.8e-20 Score=173.65 Aligned_cols=106 Identities=25% Similarity=0.316 Sum_probs=84.9
Q ss_pred CCCCcceeEEEEEEEeecCcEEEEEEcCCCCh---hHHHHHHHHHHH---------------------------HHhhcC
Q psy6828 51 PDSDFRYSAIFTPIGIYKGRIFAIKRIPKKSV---DITRAMKKELKI---------------------------DIMENE 100 (392)
Q Consensus 51 ~lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~~---~~~~~~~~E~~~---------------------------~~l~~~ 100 (392)
.||+|+||+||++.+..+++.||||.+++... ...+....|..+ +|+..+
T Consensus 2 ~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~hp~iv~~~~~~~~~~~~~lv~ey~~~g 81 (316)
T cd05619 2 MLGKGSFGKVFLAELKGTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHPFLTHLYCTFQTKENLFFVMEYLNGG 81 (316)
T ss_pred eeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhcchHHHHHHHHHHHHhccCCCcCcceEEEEEeCCEEEEEEeCCCCC
Confidence 58999999999999999999999999975421 122233334333 222211
Q ss_pred --------CcCCCHHHHHHHHHHHHHHHHHHhcCCcccccCCCCCceEEcCCceEEEeccccchh
Q psy6828 101 --------DVKLDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLVDSRWVVKLADFGLTEF 157 (392)
Q Consensus 101 --------~~~l~~~~~~~i~~qi~~~l~ylH~~~iiiHrDlKp~NIll~~~~~~kl~DFGla~~ 157 (392)
...+++.++..++.|++.||.|||++++ +||||||+|||++.++.+||+|||+++.
T Consensus 82 ~L~~~l~~~~~~~~~~~~~~~~qi~~al~~LH~~~i-vHrdikp~Nil~~~~~~~kl~Dfg~~~~ 145 (316)
T cd05619 82 DLMFHIQSCHKFDLPRATFYAAEIICGLQFLHSKGI-VYRDLKLDNILLDTDGHIKIADFGMCKE 145 (316)
T ss_pred cHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHhCCe-EeCCCCHHHEEECCCCCEEEccCCcceE
Confidence 1258899999999999999999999999 9999999999999999999999999864
No 126
>cd05102 PTKc_VEGFR3 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 3. Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 3 (VEGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR3 (or Flt4) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. V
Probab=99.80 E-value=7e-20 Score=175.10 Aligned_cols=54 Identities=31% Similarity=0.400 Sum_probs=50.6
Q ss_pred CCHHHHHHHHHHHHHHHHHHhcCCcccccCCCCCceEEcCCceEEEeccccchhc
Q psy6828 104 LDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLVDSRWVVKLADFGLTEFK 158 (392)
Q Consensus 104 l~~~~~~~i~~qi~~~l~ylH~~~iiiHrDlKp~NIll~~~~~~kl~DFGla~~~ 158 (392)
+++.++..++.|++.||.|||++++ +||||||+|||++.++.+||+|||+++..
T Consensus 171 l~~~~~~~~~~qi~~aL~~LH~~~i-vHrDiKp~Nil~~~~~~~kl~DfG~a~~~ 224 (338)
T cd05102 171 LTMEDLICYSFQVARGMEFLASRKC-IHRDLAARNILLSENNVVKICDFGLARDI 224 (338)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHCCE-ECCCCccceEEEcCCCcEEEeeccccccc
Confidence 6778889999999999999999999 99999999999999999999999998754
No 127
>PHA03212 serine/threonine kinase US3; Provisional
Probab=99.80 E-value=8.6e-20 Score=177.87 Aligned_cols=106 Identities=21% Similarity=0.198 Sum_probs=89.0
Q ss_pred eeeeccCCCCCcceeEEEEEEEeecCcEEEEEEcCCCChhHHHHHHHHHHH-----------------------------
Q psy6828 44 QVSLSSNPDSDFRYSAIFTPIGIYKGRIFAIKRIPKKSVDITRAMKKELKI----------------------------- 94 (392)
Q Consensus 44 ~~~~~~~~lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~~~~~~~~~~E~~~----------------------------- 94 (392)
..|...+.||+|+||.||++.+..+++.||+|..... .+.+|+.+
T Consensus 92 ~~y~~~~~lg~G~~g~V~~~~d~~~~~~vaiK~~~~~------~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~lv~e~~ 165 (391)
T PHA03212 92 AGFSILETFTPGAEGFAFACIDNKTCEHVVIKAGQRG------GTATEAHILRAINHPSIIQLKGTFTYNKFTCLILPRY 165 (391)
T ss_pred CCcEEEEEEcCCCCeEEEEEEECCCCCEEEEechhhh------hhHHHHHHHHhCCCCCCCCEeEEEEECCeeEEEEecC
Confidence 3466678899999999999999999999999976432 24456555
Q ss_pred -----HHhhcCCcCCCHHHHHHHHHHHHHHHHHHhcCCcccccCCCCCceEEcCCceEEEeccccchh
Q psy6828 95 -----DIMENEDVKLDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLVDSRWVVKLADFGLTEF 157 (392)
Q Consensus 95 -----~~l~~~~~~l~~~~~~~i~~qi~~~l~ylH~~~iiiHrDlKp~NIll~~~~~~kl~DFGla~~ 157 (392)
+++... ..+++.++..++.|++.||.|||++++ +||||||+|||++.++.+||+|||+++.
T Consensus 166 ~~~L~~~l~~~-~~l~~~~~~~i~~qi~~aL~ylH~~~I-vHrDiKP~NIll~~~~~vkL~DFG~a~~ 231 (391)
T PHA03212 166 KTDLYCYLAAK-RNIAICDILAIERSVLRAIQYLHENRI-IHRDIKAENIFINHPGDVCLGDFGAACF 231 (391)
T ss_pred CCCHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHhCCc-ccCCCChHhEEEcCCCCEEEEeCCcccc
Confidence 222222 258899999999999999999999999 9999999999999999999999999865
No 128
>cd07859 STKc_TDY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TDY Mitogen-Activated Protein Kinases from Plants. Serine/Threonine Kinases (STKs), Plant TDY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TDY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. Oryza sativa contains at least 17 MAPKs. There are two subtypes of plant MAPKs based on the conserved phos
Probab=99.80 E-value=1e-19 Score=173.65 Aligned_cols=111 Identities=23% Similarity=0.381 Sum_probs=90.9
Q ss_pred eeccCCCCCcceeEEEEEEEeecCcEEEEEEcCCCC--hhHHHHHHHHHHH-----------------------------
Q psy6828 46 SLSSNPDSDFRYSAIFTPIGIYKGRIFAIKRIPKKS--VDITRAMKKELKI----------------------------- 94 (392)
Q Consensus 46 ~~~~~~lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~--~~~~~~~~~E~~~----------------------------- 94 (392)
|...+.||+|+||.||++.+..+++.||||.+.... ......+.+|+.+
T Consensus 2 y~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~~~~l 81 (338)
T cd07859 2 YKIQEVIGKGSYGVVCSAIDTHTGEKVAIKKINDVFEHVSDATRILREIKLLRLLRHPDIVEIKHIMLPPSRREFKDIYV 81 (338)
T ss_pred eEEEEEEeecCCeEEEEEEECCCCCEEEEEEechhhccchhHHHHHHHHHHHHhCCCCCEeeecceEeccCCCCCceEEE
Confidence 344567999999999999999999999999986432 2333456777766
Q ss_pred ----------HHhhcCCcCCCHHHHHHHHHHHHHHHHHHhcCCcccccCCCCCceEEcCCceEEEeccccchhc
Q psy6828 95 ----------DIMENEDVKLDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLVDSRWVVKLADFGLTEFK 158 (392)
Q Consensus 95 ----------~~l~~~~~~l~~~~~~~i~~qi~~~l~ylH~~~iiiHrDlKp~NIll~~~~~~kl~DFGla~~~ 158 (392)
+++.. ...+++..+..++.|++.||.|||++++ +||||||+|||++.++.+||+|||+++..
T Consensus 82 v~e~~~~~L~~~l~~-~~~~~~~~~~~i~~qi~~aL~~LH~~~i-vH~dlkp~NIll~~~~~~kL~Dfg~~~~~ 153 (338)
T cd07859 82 VFELMESDLHQVIKA-NDDLTPEHHQFFLYQLLRALKYIHTANV-FHRDLKPKNILANADCKLKICDFGLARVA 153 (338)
T ss_pred EEecCCCCHHHHHHh-cccCCHHHHHHHHHHHHHHHHHHHHCCe-ecCCCCHHHeEECCCCcEEEccCcccccc
Confidence 11111 1258999999999999999999999999 99999999999999999999999998753
No 129
>PHA02882 putative serine/threonine kinase; Provisional
Probab=99.80 E-value=9.4e-20 Score=170.88 Aligned_cols=114 Identities=14% Similarity=0.216 Sum_probs=83.2
Q ss_pred ceeeeccCCCCCcceeEEEEEEEeec---CcEEEEEEcCCCChhH-HH-HH------HHHHHH-----------------
Q psy6828 43 SQVSLSSNPDSDFRYSAIFTPIGIYK---GRIFAIKRIPKKSVDI-TR-AM------KKELKI----------------- 94 (392)
Q Consensus 43 ~~~~~~~~~lg~G~~g~V~~~~~~~~---~~~vAiK~~~~~~~~~-~~-~~------~~E~~~----------------- 94 (392)
+..|...+.||+|+||.||+|.+..+ +..+|+|......... .+ .. ..++..
T Consensus 11 ~~~y~i~~~LG~G~fG~Vy~~~~~~~~~~~~~~~~k~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~h~~i~~~~~ 90 (294)
T PHA02882 11 GKEWKIDKLIGCGGFGCVYETQCASDHCINNQAVAKIENLENETIVMETLVYNNIYDIDKIALWKNIHNIDHLGIPKYYG 90 (294)
T ss_pred CCceEEeeEEecCCCceEEEEEEcCCcccccceEEEeccccCCchhhHHHHHHhhhhHHHHHHHHHhccCCCCCCCcEEE
Confidence 45567778899999999999998777 6678888654322110 00 00 000000
Q ss_pred ------------------------HHhhcCCcCCCHHHHHHHHHHHHHHHHHHhcCCcccccCCCCCceEEcCCceEEEe
Q psy6828 95 ------------------------DIMENEDVKLDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLVDSRWVVKLA 150 (392)
Q Consensus 95 ------------------------~~l~~~~~~l~~~~~~~i~~qi~~~l~ylH~~~iiiHrDlKp~NIll~~~~~~kl~ 150 (392)
+++... ...++..+..++.|++.||.|||++++ +||||||+|||++.++.++|+
T Consensus 91 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~i~~qi~~~l~~lH~~~i-iHrDiKp~Nill~~~~~~~l~ 168 (294)
T PHA02882 91 CGSFKRCRMYYRFILLEKLVENTKEIFKRI-KCKNKKLIKNIMKDMLTTLEYIHEHGI-SHGDIKPENIMVDGNNRGYII 168 (294)
T ss_pred eeeEecCCceEEEEEEehhccCHHHHHHhh-ccCCHHHHHHHHHHHHHHHHHHHhCCe-ecCCCCHHHEEEcCCCcEEEE
Confidence 111111 136778889999999999999999999 999999999999999999999
Q ss_pred ccccchhc
Q psy6828 151 DFGLTEFK 158 (392)
Q Consensus 151 DFGla~~~ 158 (392)
|||+|+..
T Consensus 169 DFGla~~~ 176 (294)
T PHA02882 169 DYGIASHF 176 (294)
T ss_pred EcCCceee
Confidence 99998754
No 130
>cd05108 PTKc_EGFR Catalytic domain of the Protein Tyrosine Kinase, Epidermal Growth Factor Receptor. Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EGFR (HER1, ErbB1) is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphor
Probab=99.80 E-value=2.5e-19 Score=169.64 Aligned_cols=113 Identities=22% Similarity=0.362 Sum_probs=92.3
Q ss_pred eeccCCCCCcceeEEEEEEEeecCcE----EEEEEcCCCC-hhHHHHHHHHHHH--------------------------
Q psy6828 46 SLSSNPDSDFRYSAIFTPIGIYKGRI----FAIKRIPKKS-VDITRAMKKELKI-------------------------- 94 (392)
Q Consensus 46 ~~~~~~lg~G~~g~V~~~~~~~~~~~----vAiK~~~~~~-~~~~~~~~~E~~~-------------------------- 94 (392)
|...+.||+|+||.||+|.+..+++. ||+|.++... ....+.+.+|+.+
T Consensus 9 f~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~g~~~~~~~~~v~e 88 (316)
T cd05108 9 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTSTVQLITQ 88 (316)
T ss_pred ceeeeeeecCCCceEEEEEEecCCCccceeEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEcCCCceeeee
Confidence 45567899999999999997766654 8999997543 2344567777666
Q ss_pred --------HHhhcCCcCCCHHHHHHHHHHHHHHHHHHhcCCcccccCCCCCceEEcCCceEEEeccccchhcc
Q psy6828 95 --------DIMENEDVKLDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLVDSRWVVKLADFGLTEFKR 159 (392)
Q Consensus 95 --------~~l~~~~~~l~~~~~~~i~~qi~~~l~ylH~~~iiiHrDlKp~NIll~~~~~~kl~DFGla~~~~ 159 (392)
+++......+++..+..++.|++.||.|||++++ +||||||+|||++.++.+||+|||+++...
T Consensus 89 ~~~~g~l~~~l~~~~~~~~~~~~~~~~~qi~~~L~~LH~~~i-iH~dlkp~Nill~~~~~~kl~DfG~a~~~~ 160 (316)
T cd05108 89 LMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEERRL-VHRDLAARNVLVKTPQHVKITDFGLAKLLG 160 (316)
T ss_pred cCCCCCHHHHHHhccccCCHHHHHHHHHHHHHHHHHHHhcCe-eccccchhheEecCCCcEEEcccccccccc
Confidence 3333333458888999999999999999999999 999999999999999999999999998643
No 131
>KOG0574|consensus
Probab=99.80 E-value=1.3e-20 Score=167.58 Aligned_cols=131 Identities=29% Similarity=0.395 Sum_probs=109.4
Q ss_pred eeeccCCCCCcceeEEEEEEEeecCcEEEEEEcCCCChhHHHHHHHHHHH------------------------------
Q psy6828 45 VSLSSNPDSDFRYSAIFTPIGIYKGRIFAIKRIPKKSVDITRAMKKELKI------------------------------ 94 (392)
Q Consensus 45 ~~~~~~~lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~~~~~~~~~~E~~~------------------------------ 94 (392)
.+.....||+|+||.||++.++.+|+.+|||.++.. ..++++.+|+.+
T Consensus 34 VFDi~~KLGEGSYGSV~KAIH~EsG~v~AIK~VPV~--sDLQEIIKEISIMQQC~S~yVVKYYGSYFK~sDLWIVMEYCG 111 (502)
T KOG0574|consen 34 VFDIVGKLGEGSYGSVHKAIHRESGHVLAIKKVPVD--TDLQEIIKEISIMQQCKSKYVVKYYGSYFKHSDLWIVMEYCG 111 (502)
T ss_pred HHHHHHHhcCCcchHHHHHHHhccCcEEEEEecCcc--chHHHHHHHHHHHHHcCCchhhhhhhhhccCCceEeehhhcC
Confidence 344567899999999999999999999999999755 345667888887
Q ss_pred -----HHhhcCCcCCCHHHHHHHHHHHHHHHHHHhcCCcccccCCCCCceEEcCCceEEEeccccchhcccccc------
Q psy6828 95 -----DIMENEDVKLDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLVDSRWVVKLADFGLTEFKRDAEY------ 163 (392)
Q Consensus 95 -----~~l~~~~~~l~~~~~~~i~~qi~~~l~ylH~~~iiiHrDlKp~NIll~~~~~~kl~DFGla~~~~~~~~------ 163 (392)
++++-.+..|++.++..+++.-+.||+|||...- ||||||..||||+.+|..||+|||.+..+++...
T Consensus 112 AGSiSDI~R~R~K~L~E~EIs~iL~~TLKGL~YLH~~~K-IHRDIKAGNILLNT~G~AKLADFGVAGQLTDTMAKRNTVI 190 (502)
T KOG0574|consen 112 AGSISDIMRARRKPLSEQEISAVLRDTLKGLQYLHDLKK-IHRDIKAGNILLNTDGIAKLADFGVAGQLTDTMAKRNTVI 190 (502)
T ss_pred CCcHHHHHHHhcCCccHHHHHHHHHHHHhHHHHHHHHHH-HHhhcccccEEEcccchhhhhhccccchhhhhHHhhCccc
Confidence 5555566689999999999999999999999888 9999999999999999999999999986654221
Q ss_pred -----------------ccccccceeeeeeec
Q psy6828 164 -----------------TGTDQHSFLQHTYHV 178 (392)
Q Consensus 164 -----------------~~~d~~s~g~~~~~~ 178 (392)
+..|+||+|++..|.
T Consensus 191 GTPFWMAPEVI~EIGY~~~ADIWSLGITaIEM 222 (502)
T KOG0574|consen 191 GTPFWMAPEVIEEIGYDTKADIWSLGITAIEM 222 (502)
T ss_pred cCcccccHHHHHHhccchhhhHhhhcchhhhh
Confidence 123888888887773
No 132
>cd05052 PTKc_Abl Catalytic domain of the Protein Tyrosine Kinase, Abelson kinase. Protein Tyrosine Kinase (PTK) family; Abelson (Abl) kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Abl (or c-Abl) is a ubiquitously-expressed cytoplasmic (or nonreceptor) tyr kinase that contains SH3, SH2, and tyr kinase domains in its N-terminal region, as well as nuclear localization motifs, a putative DNA-binding domain, and F- and G-actin binding domains in its C-terminal tail. It also contains a short autoinhibitory cap region in its N-terminus. Abl is normally inactive and requires phosphorylation and myristoylation for activation. Abl function depends on its subcellular localization. In the cytoplasm, Abl plays
Probab=99.80 E-value=7.1e-19 Score=161.91 Aligned_cols=129 Identities=20% Similarity=0.334 Sum_probs=103.2
Q ss_pred eccCCCCCcceeEEEEEEEeecCcEEEEEEcCCCChhHHHHHHHHHHH--------------------------------
Q psy6828 47 LSSNPDSDFRYSAIFTPIGIYKGRIFAIKRIPKKSVDITRAMKKELKI-------------------------------- 94 (392)
Q Consensus 47 ~~~~~lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~~~~~~~~~~E~~~-------------------------------- 94 (392)
...+.+|+|+||.||++....+++.||+|.+..... ....+.+|+..
T Consensus 9 ~~~~~ig~g~~~~v~~~~~~~~~~~~~~K~~~~~~~-~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~ 87 (263)
T cd05052 9 TMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTM-EVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYG 87 (263)
T ss_pred EEeeecCCcccceEEEEEEecCCceEEEEEecCCch-HHHHHHHHHHHHHhCCCCChhheEEEEcCCCCcEEEEEeCCCC
Confidence 345679999999999999999999999999876543 33456677665
Q ss_pred ---HHhhc-CCcCCCHHHHHHHHHHHHHHHHHHhcCCcccccCCCCCceEEcCCceEEEeccccchhccccc--------
Q psy6828 95 ---DIMEN-EDVKLDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLVDSRWVVKLADFGLTEFKRDAE-------- 162 (392)
Q Consensus 95 ---~~l~~-~~~~l~~~~~~~i~~qi~~~l~ylH~~~iiiHrDlKp~NIll~~~~~~kl~DFGla~~~~~~~-------- 162 (392)
+++.. ....+++..+..++.|++.||.|||++++ +||||||+||++++++.+||+|||++.......
T Consensus 88 ~L~~~~~~~~~~~l~~~~~~~~~~ql~~~l~~lH~~~i-~H~dlkp~nil~~~~~~~kl~df~~~~~~~~~~~~~~~~~~ 166 (263)
T cd05052 88 NLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNF-IHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAK 166 (263)
T ss_pred cHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCE-eecccCcceEEEcCCCcEEeCCCccccccccceeeccCCCC
Confidence 33322 22358899999999999999999999999 999999999999999999999999987643221
Q ss_pred ----------------cccccccceeeeeee
Q psy6828 163 ----------------YTGTDQHSFLQHTYH 177 (392)
Q Consensus 163 ----------------~~~~d~~s~g~~~~~ 177 (392)
....|+||||+++|+
T Consensus 167 ~~~~y~aPE~~~~~~~~~~~Dv~slG~il~e 197 (263)
T cd05052 167 FPIKWTAPESLAYNKFSIKSDVWAFGVLLWE 197 (263)
T ss_pred CccccCCHHHhccCCCCchhHHHHHHHHHHH
Confidence 112488888888888
No 133
>cd05622 STKc_ROCK1 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 1. Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK1 (or ROK-beta) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK1 is preferentially expressed in the liver, lung, spleen, testes, an
Probab=99.80 E-value=1.3e-19 Score=175.53 Aligned_cols=115 Identities=17% Similarity=0.180 Sum_probs=92.7
Q ss_pred eeeeccCCCCCcceeEEEEEEEeecCcEEEEEEcCCCCh---hHHHHHHHHHHH--------------------------
Q psy6828 44 QVSLSSNPDSDFRYSAIFTPIGIYKGRIFAIKRIPKKSV---DITRAMKKELKI-------------------------- 94 (392)
Q Consensus 44 ~~~~~~~~lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~~---~~~~~~~~E~~~-------------------------- 94 (392)
..|...+.||+|+||.||++.+..+++.||+|.+.+... .....+.+|..+
T Consensus 43 ~~y~i~~~lG~G~fg~Vy~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~e~~i~~~~~hp~iv~~~~~~~~~~~~~lv~ 122 (371)
T cd05622 43 EDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFYAFQDDRYLYMVM 122 (371)
T ss_pred hhcEEEEEEeecCCeEEEEEEECCCCcEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEEEcCCEEEEEE
Confidence 446667889999999999999999999999999865322 223345566655
Q ss_pred HHhhcC-------CcCCCHHHHHHHHHHHHHHHHHHhcCCcccccCCCCCceEEcCCceEEEeccccchhcc
Q psy6828 95 DIMENE-------DVKLDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLVDSRWVVKLADFGLTEFKR 159 (392)
Q Consensus 95 ~~l~~~-------~~~l~~~~~~~i~~qi~~~l~ylH~~~iiiHrDlKp~NIll~~~~~~kl~DFGla~~~~ 159 (392)
+++..+ ...+++..+..++.|++.||.|||++++ +||||||+|||++.++.+||+|||+++...
T Consensus 123 Ey~~gg~L~~~~~~~~~~~~~~~~~~~qi~~aL~~LH~~~i-vHrDLkp~NIll~~~~~ikL~DfG~a~~~~ 193 (371)
T cd05622 123 EYMPGGDLVNLMSNYDVPEKWARFYTAEVVLALDAIHSMGF-IHRDVKPDNMLLDKSGHLKLADFGTCMKMN 193 (371)
T ss_pred cCCCCCcHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHCCE-EeCCCCHHHEEECCCCCEEEEeCCceeEcC
Confidence 222211 1258889999999999999999999999 999999999999999999999999987653
No 134
>KOG0690|consensus
Probab=99.79 E-value=3.4e-20 Score=166.57 Aligned_cols=128 Identities=19% Similarity=0.203 Sum_probs=98.6
Q ss_pred cCCCCCcceeEEEEEEEeecCcEEEEEEcCCCChhHHHH---HHHHHHH--------------------------HHhhc
Q psy6828 49 SNPDSDFRYSAIFTPIGIYKGRIFAIKRIPKKSVDITRA---MKKELKI--------------------------DIMEN 99 (392)
Q Consensus 49 ~~~lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~~~~~~~---~~~E~~~--------------------------~~l~~ 99 (392)
.+.||+|.||+|.+|+.+.+++.||||++++.-+-..+. -..|... +|...
T Consensus 173 LKvLGkGTFGKVIL~rEKat~k~YAiKIlkKeviiakdEVAHTlTE~RVL~~~~HPFLt~LKYsFQt~drlCFVMeyanG 252 (516)
T KOG0690|consen 173 LKVLGKGTFGKVILCREKATGKLYAIKILKKEVIIAKDEVAHTLTENRVLQNCRHPFLTSLKYSFQTQDRLCFVMEYANG 252 (516)
T ss_pred HHHhcCCccceEEEEeecccCceeehhhhhhhheeehHHhhhhhhHHHHHHhccCcHHHHhhhhhccCceEEEEEEEccC
Confidence 456999999999999999999999999998764422111 1122222 22111
Q ss_pred --------CCcCCCHHHHHHHHHHHHHHHHHHhcCCcccccCCCCCceEEcCCceEEEeccccchhcccccc-c------
Q psy6828 100 --------EDVKLDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLVDSRWVVKLADFGLTEFKRDAEY-T------ 164 (392)
Q Consensus 100 --------~~~~l~~~~~~~i~~qi~~~l~ylH~~~iiiHrDlKp~NIll~~~~~~kl~DFGla~~~~~~~~-~------ 164 (392)
....+++...+.+-.+|++||.|||+++| +.||||.+|+|+|.+|++||+|||+|+.--.... +
T Consensus 253 GeLf~HLsrer~FsE~RtRFYGaEIvsAL~YLHs~~i-vYRDlKLENLlLDkDGHIKitDFGLCKE~I~~g~t~kTFCGT 331 (516)
T KOG0690|consen 253 GELFFHLSRERVFSEDRTRFYGAEIVSALGYLHSRNI-VYRDLKLENLLLDKDGHIKITDFGLCKEEIKYGDTTKTFCGT 331 (516)
T ss_pred ceEeeehhhhhcccchhhhhhhHHHHHHhhhhhhCCe-eeeechhhhheeccCCceEeeecccchhcccccceeccccCC
Confidence 22258999999999999999999999999 9999999999999999999999999985322111 1
Q ss_pred ----------------cccccceeeeeee
Q psy6828 165 ----------------GTDQHSFLQHTYH 177 (392)
Q Consensus 165 ----------------~~d~~s~g~~~~~ 177 (392)
..|.|.+|+++||
T Consensus 332 PEYLAPEVleDnDYgraVDWWG~GVVMYE 360 (516)
T KOG0690|consen 332 PEYLAPEVLEDNDYGRAVDWWGVGVVMYE 360 (516)
T ss_pred hhhcCchhhccccccceeehhhhhHHHHH
Confidence 1288888888888
No 135
>cd05605 STKc_GRK4_like Catalytic domain of G protein-coupled Receptor Kinase 4-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4-like group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. Members of the GRK4-like group include GRK4, GRK5,
Probab=99.79 E-value=1.6e-19 Score=168.49 Aligned_cols=110 Identities=20% Similarity=0.228 Sum_probs=90.0
Q ss_pred ccCCCCCcceeEEEEEEEeecCcEEEEEEcCCCChh---HHHHHHHHHHH--------------------------HH--
Q psy6828 48 SSNPDSDFRYSAIFTPIGIYKGRIFAIKRIPKKSVD---ITRAMKKELKI--------------------------DI-- 96 (392)
Q Consensus 48 ~~~~lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~~~---~~~~~~~E~~~--------------------------~~-- 96 (392)
..+.||+|+||.||++.+..+++.||+|.+...... ....+.+|+.+ ++
T Consensus 4 ~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~ 83 (285)
T cd05605 4 HYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKQILEKVNSRFVVSLAYAYETKDALCLVLTLMN 83 (285)
T ss_pred EEEEEecCCCeEEEEEEEcCCCceEEEEEEehhhhhhhhhHHHHHHHHHHHHhcCCCCEeeeeeeecCCCeEEEEEeccC
Confidence 345689999999999999999999999999754332 22345667665 22
Q ss_pred -------hhc-CCcCCCHHHHHHHHHHHHHHHHHHhcCCcccccCCCCCceEEcCCceEEEeccccchhc
Q psy6828 97 -------MEN-EDVKLDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLVDSRWVVKLADFGLTEFK 158 (392)
Q Consensus 97 -------l~~-~~~~l~~~~~~~i~~qi~~~l~ylH~~~iiiHrDlKp~NIll~~~~~~kl~DFGla~~~ 158 (392)
+.. ....+++..+..++.|++.||.|||++++ +||||||+||++++++.++|+|||++...
T Consensus 84 ~~~L~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i-vH~dlkp~Nil~~~~~~~~l~Dfg~~~~~ 152 (285)
T cd05605 84 GGDLKFHIYNMGNPGFDEERAVFYAAEITCGLEDLHRERI-VYRDLKPENILLDDYGHIRISDLGLAVEI 152 (285)
T ss_pred CCcHHHHHHhcCcCCCCHHHHHHHHHHHHHHHHHHHHCCc-EecCCCHHHEEECCCCCEEEeeCCCceec
Confidence 211 22358999999999999999999999999 99999999999999999999999998764
No 136
>cd05607 STKc_GRK7 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 7. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK7 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK7, also called iodopsin kinase, belongs to the visual gr
Probab=99.79 E-value=1.9e-19 Score=167.31 Aligned_cols=106 Identities=22% Similarity=0.274 Sum_probs=86.0
Q ss_pred CCCcceeEEEEEEEeecCcEEEEEEcCCCChh---HHHHHHHHHHH--------------------------HHhh----
Q psy6828 52 DSDFRYSAIFTPIGIYKGRIFAIKRIPKKSVD---ITRAMKKELKI--------------------------DIME---- 98 (392)
Q Consensus 52 lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~~~---~~~~~~~E~~~--------------------------~~l~---- 98 (392)
||+|+||.||++.+..+|+.||+|.+.+.... .......|+++ +++.
T Consensus 1 lg~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~E~~il~~l~hp~i~~~~~~~~~~~~~~lv~e~~~g~~L 80 (277)
T cd05607 1 LGKGGFGEVCAVQVKNTGKMYACKKLDKKRLKKKSGEKMALLEKEILEKVNSPFIVNLAYAFESKTHLCLVMSLMNGGDL 80 (277)
T ss_pred CCCCCceEEEEEEEccCCcEEEEEEEcHHHhhcchhhHHHHHHHHHHHhcCCCcEEEEEEEEecCCeEEEEEecCCCCCH
Confidence 69999999999999999999999999754321 22334456555 2221
Q ss_pred ------cCCcCCCHHHHHHHHHHHHHHHHHHhcCCcccccCCCCCceEEcCCceEEEeccccchhc
Q psy6828 99 ------NEDVKLDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLVDSRWVVKLADFGLTEFK 158 (392)
Q Consensus 99 ------~~~~~l~~~~~~~i~~qi~~~l~ylH~~~iiiHrDlKp~NIll~~~~~~kl~DFGla~~~ 158 (392)
.....+++..+..++.|++.||.|||+.++ +||||||+||+++.++.++|+|||++...
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~i-vH~dikp~Nili~~~~~~~l~Dfg~~~~~ 145 (277)
T cd05607 81 KYHIYNVGERGLEMERVIHYSAQITCGILHLHSMDI-VYRDMKPENVLLDDQGNCRLSDLGLAVEL 145 (277)
T ss_pred HHHHHhccccCCCHHHHHHHHHHHHHHHHHHHHCCE-EEccCChHhEEEcCCCCEEEeeceeeeec
Confidence 122358888999999999999999999999 99999999999999999999999998754
No 137
>KOG0668|consensus
Probab=99.79 E-value=3.3e-20 Score=159.27 Aligned_cols=129 Identities=23% Similarity=0.339 Sum_probs=104.8
Q ss_pred eeeccCCCCCcceeEEEEEEEeecCcEEEEEEcCCCChhHHHHHHHHHHH-----------------------------H
Q psy6828 45 VSLSSNPDSDFRYSAIFTPIGIYKGRIFAIKRIPKKSVDITRAMKKELKI-----------------------------D 95 (392)
Q Consensus 45 ~~~~~~~lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~~~~~~~~~~E~~~-----------------------------~ 95 (392)
-|-..+.+|+|.|++||.|.+..++++++||+++.-. .+.+.+|+.| +
T Consensus 39 dYeivrk~GRGKYSEVFeg~~~~~~eK~ViKiLKPVk---kkKIkREikIL~nL~gg~NIi~L~DiV~Dp~SktpaLiFE 115 (338)
T KOG0668|consen 39 DYEIVRKVGRGKYSEVFEGINITNNEKCVIKILKPVK---KKKIKREIKILQNLRGGPNIIKLLDIVKDPESKTPSLIFE 115 (338)
T ss_pred hHHHHHHHcCccHhhHhcccccCCCceEEEeeechHH---HHHHHHHHHHHHhccCCCCeeehhhhhcCccccCchhHhh
Confidence 3555788999999999999999999999999996443 4668888888 3
Q ss_pred HhhcCCc-----CCCHHHHHHHHHHHHHHHHHHhcCCcccccCCCCCceEEcCC-ceEEEeccccchhccccccc-----
Q psy6828 96 IMENEDV-----KLDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLVDSR-WVVKLADFGLTEFKRDAEYT----- 164 (392)
Q Consensus 96 ~l~~~~~-----~l~~~~~~~i~~qi~~~l~ylH~~~iiiHrDlKp~NIll~~~-~~~kl~DFGla~~~~~~~~~----- 164 (392)
++++.+. .|+...++.++.|++.||.||||.|| +|||+||.|++++.. -.++|+|||+|.+.......
T Consensus 116 ~v~n~Dfk~ly~tl~d~dIryY~~elLkALdyCHS~GI-mHRDVKPhNvmIdh~~rkLrlIDWGLAEFYHp~~eYnVRVA 194 (338)
T KOG0668|consen 116 YVNNTDFKQLYPTLTDYDIRYYIYELLKALDYCHSMGI-MHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNVRVA 194 (338)
T ss_pred hhccccHHHHhhhhchhhHHHHHHHHHHHHhHHHhcCc-ccccCCcceeeechhhceeeeeecchHhhcCCCceeeeeee
Confidence 3333222 47888899999999999999999999 999999999999876 56999999999987654432
Q ss_pred ------------------cccccceeeeeee
Q psy6828 165 ------------------GTDQHSFLQHTYH 177 (392)
Q Consensus 165 ------------------~~d~~s~g~~~~~ 177 (392)
+.|+|||||.+-.
T Consensus 195 SRyfKGPELLVdy~~YDYSLD~WS~GcmlA~ 225 (338)
T KOG0668|consen 195 SRYFKGPELLVDYQMYDYSLDMWSLGCMLAS 225 (338)
T ss_pred hhhcCCchheeechhccccHHHHHHHHHHHH
Confidence 1288888887654
No 138
>cd05632 STKc_GRK5 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 5. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK5 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK5 is widely expressed in many tissues. It associates with
Probab=99.79 E-value=2.3e-19 Score=167.47 Aligned_cols=109 Identities=20% Similarity=0.187 Sum_probs=89.6
Q ss_pred cCCCCCcceeEEEEEEEeecCcEEEEEEcCCCCh---hHHHHHHHHHHH-------------------------------
Q psy6828 49 SNPDSDFRYSAIFTPIGIYKGRIFAIKRIPKKSV---DITRAMKKELKI------------------------------- 94 (392)
Q Consensus 49 ~~~lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~~---~~~~~~~~E~~~------------------------------- 94 (392)
.+.||+|+||+||++.+..+++.||+|.+.+... ...+.+.+|+.+
T Consensus 5 ~~~lg~G~~g~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~i~~~~~~~~~~~~~~lv~e~~~~ 84 (285)
T cd05632 5 YRVLGKGGFGEVCACQVRATGKMYACKRLEKKRIKKRKGESMALNEKQILEKVNSQFVVNLAYAYETKDALCLVLTIMNG 84 (285)
T ss_pred EEEEecCCCeEEEEEEECCCCcEEEEEEeehhhhhhhhHHHHHHHHHHHHHHcCCcCceeEEEEEecCCEEEEEEEeccC
Confidence 4569999999999999999999999999976533 223345667666
Q ss_pred ----HHhh-cCCcCCCHHHHHHHHHHHHHHHHHHhcCCcccccCCCCCceEEcCCceEEEeccccchhc
Q psy6828 95 ----DIME-NEDVKLDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLVDSRWVVKLADFGLTEFK 158 (392)
Q Consensus 95 ----~~l~-~~~~~l~~~~~~~i~~qi~~~l~ylH~~~iiiHrDlKp~NIll~~~~~~kl~DFGla~~~ 158 (392)
+++. .....+++..+..++.|++.||.|||++++ +||||||+||++++++.+||+|||++...
T Consensus 85 ~~L~~~~~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~~i-iH~dikp~Nili~~~~~~kl~Dfg~~~~~ 152 (285)
T cd05632 85 GDLKFHIYNMGNPGFEEERALFYAAEILCGLEDLHRENT-VYRDLKPENILLDDYGHIRISDLGLAVKI 152 (285)
T ss_pred ccHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCe-eecCCCHHHEEECCCCCEEEecCCcceec
Confidence 1222 122358999999999999999999999999 99999999999999999999999988653
No 139
>cd05071 PTKc_Src Catalytic domain of the Protein Tyrosine Kinase, Src. Protein Tyrosine Kinase (PTK) family; Src kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) is a cytoplasmic (or non-receptor) tyr kinase, containing an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region with a conserved tyr. It is activated by autophosphorylation at the tyr kinase domain, and is negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). c-Src is the vertebrate homolog of the oncogenic protein (v-Src) from Rous sarcoma virus. Together with other Src subfamily proteins, it is invo
Probab=99.79 E-value=5.8e-19 Score=162.57 Aligned_cols=131 Identities=23% Similarity=0.249 Sum_probs=101.3
Q ss_pred eeeeccCCCCCcceeEEEEEEEeecCcEEEEEEcCCCChhHHHHHHHHHHH-----------------------------
Q psy6828 44 QVSLSSNPDSDFRYSAIFTPIGIYKGRIFAIKRIPKKSVDITRAMKKELKI----------------------------- 94 (392)
Q Consensus 44 ~~~~~~~~lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~~~~~~~~~~E~~~----------------------------- 94 (392)
..|...+.||+|+||.||++.+..+ ..||+|.+++... ..+.+.+|+.+
T Consensus 6 ~~~~~~~~lg~g~~~~v~~~~~~~~-~~valK~~~~~~~-~~~~~~~E~~~l~~l~~~~i~~~~~~~~~~~~~lv~e~~~ 83 (262)
T cd05071 6 ESLRLEVKLGQGCFGEVWMGTWNGT-TRVAIKTLKPGTM-SPEAFLQEAQVMKKLRHEKLVQLYAVVSEEPIYIVTEYMS 83 (262)
T ss_pred HHeeEeeecCCCCCCcEEEEEecCC-ceEEEEecccCcc-CHHHHHHHHHHHHhCCCCCcceEEEEECCCCcEEEEEcCC
Confidence 3466677899999999999986544 5699999976443 23456777766
Q ss_pred -----HHhhc-CCcCCCHHHHHHHHHHHHHHHHHHhcCCcccccCCCCCceEEcCCceEEEeccccchhccccc------
Q psy6828 95 -----DIMEN-EDVKLDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLVDSRWVVKLADFGLTEFKRDAE------ 162 (392)
Q Consensus 95 -----~~l~~-~~~~l~~~~~~~i~~qi~~~l~ylH~~~iiiHrDlKp~NIll~~~~~~kl~DFGla~~~~~~~------ 162 (392)
+++.. ....+++..+..++.|++.||.|+|+.++ +||||||+||++++++.+||+|||+++......
T Consensus 84 ~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~aL~~lH~~~i-~H~dl~p~Nill~~~~~~~L~dfg~~~~~~~~~~~~~~~ 162 (262)
T cd05071 84 KGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMNY-VHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQG 162 (262)
T ss_pred CCcHHHHHhhccccCCCHHHHHHHHHHHHHHHHHHHHCCc-cccccCcccEEEcCCCcEEeccCCceeeccccccccccC
Confidence 33322 12247889999999999999999999999 999999999999999999999999987542211
Q ss_pred ------------------cccccccceeeeeee
Q psy6828 163 ------------------YTGTDQHSFLQHTYH 177 (392)
Q Consensus 163 ------------------~~~~d~~s~g~~~~~ 177 (392)
...+|+||+|+++|+
T Consensus 163 ~~~~~~y~~PE~~~~~~~~~~~DvwslG~~l~e 195 (262)
T cd05071 163 AKFPIKWTAPEAALYGRFTIKSDVWSFGILLTE 195 (262)
T ss_pred CcccceecCHhHhccCCCCchhhHHHHHHHHHH
Confidence 112488888888887
No 140
>PLN03225 Serine/threonine-protein kinase SNT7; Provisional
Probab=99.79 E-value=1.4e-19 Score=183.28 Aligned_cols=113 Identities=14% Similarity=0.257 Sum_probs=80.9
Q ss_pred eeeccCCCCCcceeEEEEEEEeec----CcEEEEEEcCCCChh---HHHHHHHHHH------------------------
Q psy6828 45 VSLSSNPDSDFRYSAIFTPIGIYK----GRIFAIKRIPKKSVD---ITRAMKKELK------------------------ 93 (392)
Q Consensus 45 ~~~~~~~lg~G~~g~V~~~~~~~~----~~~vAiK~~~~~~~~---~~~~~~~E~~------------------------ 93 (392)
.|...+.||+|+||.||+|.+..+ +..||+|++...... ..+.+.+...
T Consensus 133 ~y~l~~~LG~G~FG~VYka~~~~~~~~~~~~vAvK~~~~~~~~e~~~~e~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~L 212 (566)
T PLN03225 133 DFVLGKKLGEGAFGVVYKASLVNKQSKKEGKYVLKKATEYGAVEIWMNERVRRACPNSCADFVYGFLEPVSSKKEDEYWL 212 (566)
T ss_pred CeEEeEEEeeCCCeEEEEEEEcCCccccCcEEEEEEecccchhHHHHHHHHHhhchhhHHHHHHhhhcccccccCCceEE
Confidence 456678899999999999999888 899999998643221 1111111000
Q ss_pred ----------HHHhhcCCc-------------------CCCHHHHHHHHHHHHHHHHHHhcCCcccccCCCCCceEEcC-
Q psy6828 94 ----------IDIMENEDV-------------------KLDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLVDS- 143 (392)
Q Consensus 94 ----------~~~l~~~~~-------------------~l~~~~~~~i~~qi~~~l~ylH~~~iiiHrDlKp~NIll~~- 143 (392)
.+++..... ...+..+..++.|++.||.|||++++ +||||||+|||++.
T Consensus 213 V~ey~~~gsL~~~l~~~~~~~~v~~~l~~~~~~l~~~~~r~~~~i~~i~~qll~aL~yLH~~gI-iHRDLKP~NILl~~~ 291 (566)
T PLN03225 213 VWRYEGESTLADLMQSKEFPYNVEPYLLGKVQDLPKGLERENKIIQTIMRQILFALDGLHSTGI-VHRDVKPQNIIFSEG 291 (566)
T ss_pred EEEecCCCcHHHHHHhcCCchhHHHHhccchhhccccchhhHHHHHHHHHHHHHHHHHHHHCCE-EeCcCCHHHEEEeCC
Confidence 012211110 11233466899999999999999999 99999999999986
Q ss_pred CceEEEeccccchhc
Q psy6828 144 RWVVKLADFGLTEFK 158 (392)
Q Consensus 144 ~~~~kl~DFGla~~~ 158 (392)
++.+||+|||+|+..
T Consensus 292 ~~~~KL~DFGlA~~l 306 (566)
T PLN03225 292 SGSFKIIDLGAAADL 306 (566)
T ss_pred CCcEEEEeCCCcccc
Confidence 589999999999743
No 141
>PHA03211 serine/threonine kinase US3; Provisional
Probab=99.79 E-value=1.7e-19 Score=178.47 Aligned_cols=108 Identities=18% Similarity=0.171 Sum_probs=89.7
Q ss_pred eeeccCCCCCcceeEEEEEEEeecCcEEEEEEcCCCChhHHHHHHHHHHH------------------------------
Q psy6828 45 VSLSSNPDSDFRYSAIFTPIGIYKGRIFAIKRIPKKSVDITRAMKKELKI------------------------------ 94 (392)
Q Consensus 45 ~~~~~~~lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~~~~~~~~~~E~~~------------------------------ 94 (392)
.|...+.||+|+||.||++.+..+++.||||...... +.+|+.+
T Consensus 170 gy~i~~~Lg~G~~G~Vy~a~~~~~~~~vavK~~~~~~------~~~E~~iL~~L~HpnIv~l~~~~~~~~~~~lv~e~~~ 243 (461)
T PHA03211 170 GFAIHRALTPGSEGCVFESSHPDYPQRVVVKAGWYAS------SVHEARLLRRLSHPAVLALLDVRVVGGLTCLVLPKYR 243 (461)
T ss_pred CeEEEEEEccCCCeEEEEEEECCCCCEEEEecccccC------HHHHHHHHHHCCCCCCCcEEEEEEECCEEEEEEEccC
Confidence 4666788999999999999999999999999654322 2344444
Q ss_pred ----HHhhcCCcCCCHHHHHHHHHHHHHHHHHHhcCCcccccCCCCCceEEcCCceEEEeccccchhcc
Q psy6828 95 ----DIMENEDVKLDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLVDSRWVVKLADFGLTEFKR 159 (392)
Q Consensus 95 ----~~l~~~~~~l~~~~~~~i~~qi~~~l~ylH~~~iiiHrDlKp~NIll~~~~~~kl~DFGla~~~~ 159 (392)
+++......+++.++..++.|++.||.|||++++ +||||||+|||++.++.+||+|||+++...
T Consensus 244 ~~L~~~l~~~~~~l~~~~~~~i~~qi~~aL~yLH~~gI-vHrDLKP~NILl~~~~~vkL~DFGla~~~~ 311 (461)
T PHA03211 244 SDLYTYLGARLRPLGLAQVTAVARQLLSAIDYIHGEGI-IHRDIKTENVLVNGPEDICLGDFGAACFAR 311 (461)
T ss_pred CCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCE-EECcCCHHHEEECCCCCEEEcccCCceecc
Confidence 3333333369999999999999999999999999 999999999999999999999999987653
No 142
>cd05596 STKc_ROCK Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase. Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK is also referred to as Rho-associated kinase or simply as Rho kinase. It contains an N-terminal extension, a catalytic kinase domain, and a long C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain. It is activated via in
Probab=99.79 E-value=1.9e-19 Score=174.28 Aligned_cols=114 Identities=17% Similarity=0.165 Sum_probs=91.9
Q ss_pred eeeccCCCCCcceeEEEEEEEeecCcEEEEEEcCCCCh---hHHHHHHHHHHH--------------------------H
Q psy6828 45 VSLSSNPDSDFRYSAIFTPIGIYKGRIFAIKRIPKKSV---DITRAMKKELKI--------------------------D 95 (392)
Q Consensus 45 ~~~~~~~lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~~---~~~~~~~~E~~~--------------------------~ 95 (392)
.|...+.||+|+||.||++.+..+++.||+|.+++... .....+.+|+.+ +
T Consensus 44 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~il~~~~h~~iv~~~~~~~~~~~~~lv~E 123 (370)
T cd05596 44 DFDVIKVIGRGAFGEVQLVRHKSSKQVYAMKLLSKFEMIKRSDSAFFWEERDIMAHANSEWIVQLHYAFQDDKYLYMVME 123 (370)
T ss_pred HcEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhCCCCCcceEEEEEecCCEEEEEEc
Confidence 35556789999999999999999999999999965322 223345566665 2
Q ss_pred HhhcC-------CcCCCHHHHHHHHHHHHHHHHHHhcCCcccccCCCCCceEEcCCceEEEeccccchhcc
Q psy6828 96 IMENE-------DVKLDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLVDSRWVVKLADFGLTEFKR 159 (392)
Q Consensus 96 ~l~~~-------~~~l~~~~~~~i~~qi~~~l~ylH~~~iiiHrDlKp~NIll~~~~~~kl~DFGla~~~~ 159 (392)
|+..+ +..+++..+..++.|++.||.|||++++ +||||||+|||++.++.+||+|||++....
T Consensus 124 y~~gg~L~~~l~~~~l~~~~~~~~~~qi~~aL~~LH~~~i-vHrDLkp~NILl~~~~~~kL~DfG~~~~~~ 193 (370)
T cd05596 124 YMPGGDLVNLMSNYDIPEKWARFYTAEVVLALDAIHSMGF-IHRDVKPDNMLLDKSGHLKLADFGTCMKMD 193 (370)
T ss_pred CCCCCcHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHCCe-eccCCCHHHEEEcCCCCEEEEeccceeecc
Confidence 22221 1258889999999999999999999999 999999999999999999999999987543
No 143
>cd05081 PTKc_Jak2_Jak3_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3. Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as th
Probab=99.79 E-value=3.2e-19 Score=166.03 Aligned_cols=113 Identities=24% Similarity=0.347 Sum_probs=94.4
Q ss_pred eeccCCCCCcceeEEEEEE----EeecCcEEEEEEcCCCChhHHHHHHHHHHH---------------------------
Q psy6828 46 SLSSNPDSDFRYSAIFTPI----GIYKGRIFAIKRIPKKSVDITRAMKKELKI--------------------------- 94 (392)
Q Consensus 46 ~~~~~~lg~G~~g~V~~~~----~~~~~~~vAiK~~~~~~~~~~~~~~~E~~~--------------------------- 94 (392)
+...+.+|+|+||.||++. +..+++.||+|.+........+.+.+|+.+
T Consensus 6 ~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~lv 85 (284)
T cd05081 6 LKFIQQLGKGNFGSVELCRYDPLQDNTGEVVAVKKLQHSTAEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLRLV 85 (284)
T ss_pred ceeeeeccCCCCceEEEEEecCCcCCCCcEEEEEEeccCCHHHHHHHHHHHHHHHhCCCCCeeEEEEEEccCCCCceEEE
Confidence 3445679999999999997 345788999999987766666778888776
Q ss_pred ----------HHhhcCCcCCCHHHHHHHHHHHHHHHHHHhcCCcccccCCCCCceEEcCCceEEEeccccchhcc
Q psy6828 95 ----------DIMENEDVKLDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLVDSRWVVKLADFGLTEFKR 159 (392)
Q Consensus 95 ----------~~l~~~~~~l~~~~~~~i~~qi~~~l~ylH~~~iiiHrDlKp~NIll~~~~~~kl~DFGla~~~~ 159 (392)
+++......+++..+..++.|++.||.|||++++ +||||||+||+++.++.+||+|||+++...
T Consensus 86 ~e~~~~~~L~~~l~~~~~~l~~~~~~~~~~~l~~aL~~LH~~~i-~H~dlkp~nili~~~~~~~l~dfg~~~~~~ 159 (284)
T cd05081 86 MEYLPYGSLRDYLQKHRERLDHRKLLLYASQICKGMEYLGSKRY-VHRDLATRNILVESENRVKIGDFGLTKVLP 159 (284)
T ss_pred EEecCCCCHHHHHHhcCcCCCHHHHHHHHHHHHHHHHHHHHCCc-eeccCCHhhEEECCCCeEEECCCccccccc
Confidence 3333333358899999999999999999999999 999999999999999999999999988653
No 144
>KOG0612|consensus
Probab=99.79 E-value=5.5e-20 Score=187.79 Aligned_cols=112 Identities=22% Similarity=0.227 Sum_probs=94.7
Q ss_pred eeccCCCCCcceeEEEEEEEeecCcEEEEEEcCCCCh---hHHHHHHHHHHH--------------------------HH
Q psy6828 46 SLSSNPDSDFRYSAIFTPIGIYKGRIFAIKRIPKKSV---DITRAMKKELKI--------------------------DI 96 (392)
Q Consensus 46 ~~~~~~lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~~---~~~~~~~~E~~~--------------------------~~ 96 (392)
|.....||+|+||.|.+++++.+++.||+|++++..+ ..+..|..|..+ +|
T Consensus 77 feilKvIGrGaFGEV~lVr~k~t~~VYAMK~lnK~eMlKr~~tA~F~EERDimv~~ns~Wiv~LhyAFQD~~~LYlVMdY 156 (1317)
T KOG0612|consen 77 FEILKVIGRGAFGEVALVRHKSTEKVYAMKILNKWEMLKRAETACFREERDIMVFGNSEWIVQLHYAFQDERYLYLVMDY 156 (1317)
T ss_pred hHHHHHhcccccceeEEEEeeccccchhHHHhhHHHHhhchhHHHHHHHhHHHHcCCcHHHHHHHHHhcCccceEEEEec
Confidence 3446779999999999999999999999999988543 334556666665 33
Q ss_pred hh---------cCCcCCCHHHHHHHHHHHHHHHHHHhcCCcccccCCCCCceEEcCCceEEEeccccchhcc
Q psy6828 97 ME---------NEDVKLDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLVDSRWVVKLADFGLTEFKR 159 (392)
Q Consensus 97 l~---------~~~~~l~~~~~~~i~~qi~~~l~ylH~~~iiiHrDlKp~NIll~~~~~~kl~DFGla~~~~ 159 (392)
+- +.+ .+++..+++|+.+|+.||.-||+.|+ |||||||+|||||..|++||+|||.|-.+.
T Consensus 157 ~pGGDlltLlSk~~-~~pE~~ArFY~aEiVlAldslH~mgy-VHRDiKPDNvLld~~GHikLADFGsClkm~ 226 (1317)
T KOG0612|consen 157 MPGGDLLTLLSKFD-RLPEDWARFYTAEIVLALDSLHSMGY-VHRDIKPDNVLLDKSGHIKLADFGSCLKMD 226 (1317)
T ss_pred ccCchHHHHHhhcC-CChHHHHHHHHHHHHHHHHHHHhccc-eeccCCcceeEecccCcEeeccchhHHhcC
Confidence 33 333 69999999999999999999999999 999999999999999999999999987654
No 145
>KOG1152|consensus
Probab=99.79 E-value=2.7e-19 Score=171.35 Aligned_cols=115 Identities=24% Similarity=0.362 Sum_probs=96.5
Q ss_pred eeccCCCCCcceeEEEEEEEeecCcEEEEEEcCCCChhH--------HHHHHHHHHH-----------------------
Q psy6828 46 SLSSNPDSDFRYSAIFTPIGIYKGRIFAIKRIPKKSVDI--------TRAMKKELKI----------------------- 94 (392)
Q Consensus 46 ~~~~~~lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~~~~--------~~~~~~E~~~----------------------- 94 (392)
|.+..++|+|+||.|++|.++.+...|+||.+.|..+-. +-.+..|++|
T Consensus 563 yttlq~lG~GAyGkV~lai~K~n~~eVViK~I~KeRIL~DtWvrDrkLGtVp~EIqIla~l~~~sH~NIlKlLdfFEddd 642 (772)
T KOG1152|consen 563 YTTLQPLGEGAYGKVNLAIHKENNYEVVIKMIFKERILVDTWVRDRKLGTVPSEIQILATLNKHSHENILKLLDFFEDDD 642 (772)
T ss_pred ceeeeeccccccceEEEeeecccceEEEeeehhhhhhhhhhhhcccccCccchhHHHHHHhhhcCccchhhhhheeecCC
Confidence 677889999999999999999999999999998765411 0113334444
Q ss_pred ----------------HHhhcCCcCCCHHHHHHHHHHHHHHHHHHhcCCcccccCCCCCceEEcCCceEEEeccccchhc
Q psy6828 95 ----------------DIMENEDVKLDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLVDSRWVVKLADFGLTEFK 158 (392)
Q Consensus 95 ----------------~~l~~~~~~l~~~~~~~i~~qi~~~l~ylH~~~iiiHrDlKp~NIll~~~~~~kl~DFGla~~~ 158 (392)
++++.+. .++|.++..|++|++.|+++||+.+| +|||||-+|+.++.+|-+||+|||.+...
T Consensus 643 ~yyl~te~hg~gIDLFd~IE~kp-~m~E~eAk~IFkQV~agi~hlh~~~i-vhrdikdenvivd~~g~~klidfgsaa~~ 720 (772)
T KOG1152|consen 643 YYYLETEVHGEGIDLFDFIEFKP-RMDEPEAKLIFKQVVAGIKHLHDQGI-VHRDIKDENVIVDSNGFVKLIDFGSAAYT 720 (772)
T ss_pred eeEEEecCCCCCcchhhhhhccC-ccchHHHHHHHHHHHhccccccccCc-eecccccccEEEecCCeEEEeeccchhhh
Confidence 5555554 69999999999999999999999999 99999999999999999999999998876
Q ss_pred cccc
Q psy6828 159 RDAE 162 (392)
Q Consensus 159 ~~~~ 162 (392)
.+..
T Consensus 721 ksgp 724 (772)
T KOG1152|consen 721 KSGP 724 (772)
T ss_pred cCCC
Confidence 5543
No 146
>cd05115 PTKc_Zap-70 Catalytic domain of the Protein Tyrosine Kinase, Zeta-chain-associated protein of 70kDa. Protein Tyrosine Kinase (PTK) family; Zeta-chain-associated protein of 70kDa (Zap-70); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Zap-70 is a member of the Syk subfamily of kinases, which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Zap-70 is primarily expressed in T-cells and NK cells, and is a crucial component in T-cell receptor (TCR) signaling. Zap-70 binds the phosphorylated ITAM (immunoreceptor tyr activation motif) sequences of the activated TCR zeta-chain through its SH2 domains, leading to its pho
Probab=99.79 E-value=1.1e-18 Score=160.23 Aligned_cols=107 Identities=21% Similarity=0.292 Sum_probs=88.2
Q ss_pred CCCCcceeEEEEEEEe--ecCcEEEEEEcCCCCh-hHHHHHHHHHHH---------------------------------
Q psy6828 51 PDSDFRYSAIFTPIGI--YKGRIFAIKRIPKKSV-DITRAMKKELKI--------------------------------- 94 (392)
Q Consensus 51 ~lg~G~~g~V~~~~~~--~~~~~vAiK~~~~~~~-~~~~~~~~E~~~--------------------------------- 94 (392)
.||+|+||.||+|... .++..||+|.+..... ...+.+.+|+.+
T Consensus 2 ~ig~G~~g~v~~~~~~~~~~~~~vavk~~~~~~~~~~~~~~~~E~~~l~~l~h~~ii~~~~~~~~~~~~lv~e~~~~~~L 81 (257)
T cd05115 2 ELGSGNFGCVKKGVYKMRKKQIDVAIKVLKNENEKSVRDEMMREAEIMHQLDNPYIVRMIGVCEAEALMLVMEMASGGPL 81 (257)
T ss_pred ccCCCCcccEEEEEEecCCCceeEEEEEcccccChHHHHHHHHHHHHHHhcCCCCeEEEEEEEcCCCeEEEEEeCCCCCH
Confidence 4899999999999765 3456799999976533 334567777766
Q ss_pred -HHhhcCCcCCCHHHHHHHHHHHHHHHHHHhcCCcccccCCCCCceEEcCCceEEEeccccchhc
Q psy6828 95 -DIMENEDVKLDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLVDSRWVVKLADFGLTEFK 158 (392)
Q Consensus 95 -~~l~~~~~~l~~~~~~~i~~qi~~~l~ylH~~~iiiHrDlKp~NIll~~~~~~kl~DFGla~~~ 158 (392)
+++......+++..+..++.|++.||.|||++++ +||||||+||+++.++.+||+|||+++..
T Consensus 82 ~~~l~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i-~H~dlkp~nil~~~~~~~kl~dfg~~~~~ 145 (257)
T cd05115 82 NKFLSGKKDEITVSNVVELMHQVSMGMKYLEGKNF-VHRDLAARNVLLVNQHYAKISDFGLSKAL 145 (257)
T ss_pred HHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhcCe-eecccchheEEEcCCCcEEeccCCccccc
Confidence 3444334468999999999999999999999999 99999999999999999999999998743
No 147
>KOG0582|consensus
Probab=99.79 E-value=4.3e-19 Score=165.60 Aligned_cols=112 Identities=28% Similarity=0.356 Sum_probs=94.6
Q ss_pred eeccCCCCCcceeEEEEEEEeecCcEEEEEEcCCCCh-hHHHHHHHHHHH------------------------------
Q psy6828 46 SLSSNPDSDFRYSAIFTPIGIYKGRIFAIKRIPKKSV-DITRAMKKELKI------------------------------ 94 (392)
Q Consensus 46 ~~~~~~lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~~-~~~~~~~~E~~~------------------------------ 94 (392)
|.....+|.|.-++||+|+..-+++.||||+++-..- ...+.+++|+..
T Consensus 28 YeL~e~IG~G~sa~V~~A~c~p~~e~VAIK~inLEkc~~~ld~l~kE~~~msl~~HPNIv~~~~sFvv~~~LWvVmpfMa 107 (516)
T KOG0582|consen 28 YELQEVIGVGASAVVYLARCIPTNEVVAIKIINLEKCNNDLDALRKEVQTMSLIDHPNIVTYHCSFVVDSELWVVMPFMA 107 (516)
T ss_pred eeEEEEEeccceeEeeeeeecccCCEEEEEEeehhhhhhhHHHHHHHHHHhhhcCCCCcceEEEEEEecceeEEeehhhc
Confidence 5556779999999999999999999999999975443 335788888887
Q ss_pred -----HHhhcC-CcCCCHHHHHHHHHHHHHHHHHHhcCCcccccCCCCCceEEcCCceEEEeccccchhc
Q psy6828 95 -----DIMENE-DVKLDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLVDSRWVVKLADFGLTEFK 158 (392)
Q Consensus 95 -----~~l~~~-~~~l~~~~~~~i~~qi~~~l~ylH~~~iiiHrDlKp~NIll~~~~~~kl~DFGla~~~ 158 (392)
++++.. ...++|..+..++++++.||.|||++|. ||||+|+.||||+.+|.+||+|||.+..+
T Consensus 108 ~GS~ldIik~~~~~Gl~E~~Ia~iLre~LkaL~YLH~~G~-IHRdvKAgnILi~~dG~VkLadFgvsa~l 176 (516)
T KOG0582|consen 108 GGSLLDIIKTYYPDGLEEASIATILREVLKALDYLHQNGH-IHRDVKAGNILIDSDGTVKLADFGVSASL 176 (516)
T ss_pred CCcHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHhcCc-eecccccccEEEcCCCcEEEcCceeeeee
Confidence 222210 1139999999999999999999999999 99999999999999999999999987654
No 148
>KOG0196|consensus
Probab=99.79 E-value=3.1e-19 Score=176.15 Aligned_cols=136 Identities=24% Similarity=0.315 Sum_probs=114.0
Q ss_pred eccCCCCCcceeEEEEEEEeecCc---EEEEEEcCCCCh-hHHHHHHHHHHH--------------------------HH
Q psy6828 47 LSSNPDSDFRYSAIFTPIGIYKGR---IFAIKRIPKKSV-DITRAMKKELKI--------------------------DI 96 (392)
Q Consensus 47 ~~~~~lg~G~~g~V~~~~~~~~~~---~vAiK~~~~~~~-~~~~~~~~E~~~--------------------------~~ 96 (392)
...+.||.|.||+|++|+.+..|+ .||||.++.... .+...|+.|..| +|
T Consensus 632 ~Ie~VIGaGEFGEVc~GrLk~pgkre~~VAIKTLK~GytekqrrdFL~EAsIMGQFdHPNIIrLEGVVTks~PvMIiTEy 711 (996)
T KOG0196|consen 632 KIEKVIGAGEFGEVCSGRLKLPGKREITVAIKTLKAGYTEKQRRDFLSEASIMGQFDHPNIIRLEGVVTKSKPVMIITEY 711 (996)
T ss_pred EEEEEEecccccceecccccCCCCcceeEEEeeeccCccHHHHhhhhhhhhhcccCCCCcEEEEEEEEecCceeEEEhhh
Confidence 346679999999999999887774 699999987654 456679999998 44
Q ss_pred h---------hcCCcCCCHHHHHHHHHHHHHHHHHHhcCCcccccCCCCCceEEcCCceEEEeccccchhccccccc---
Q psy6828 97 M---------ENEDVKLDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLVDSRWVVKLADFGLTEFKRDAEYT--- 164 (392)
Q Consensus 97 l---------~~~~~~l~~~~~~~i~~qi~~~l~ylH~~~iiiHrDlKp~NIll~~~~~~kl~DFGla~~~~~~~~~--- 164 (392)
| +..+++|+..+..-+++.|+.|++||-+.+. +||||...|||++.+-.+|++|||+++++.++...
T Consensus 712 MENGsLDsFLR~~DGqftviQLVgMLrGIAsGMkYLsdm~Y-VHRDLAARNILVNsnLvCKVsDFGLSRvledd~~~~yt 790 (996)
T KOG0196|consen 712 MENGSLDSFLRQNDGQFTVIQLVGMLRGIASGMKYLSDMNY-VHRDLAARNILVNSNLVCKVSDFGLSRVLEDDPEAAYT 790 (996)
T ss_pred hhCCcHHHHHhhcCCceEeehHHHHHHHHHHHhHHHhhcCc-hhhhhhhhheeeccceEEEeccccceeecccCCCcccc
Confidence 4 4456689999999999999999999999999 99999999999999999999999999987654411
Q ss_pred -----------------------cccccceeeeeeeccCCCC
Q psy6828 165 -----------------------GTDQHSFLQHTYHVNRAGS 183 (392)
Q Consensus 165 -----------------------~~d~~s~g~~~~~~~~~~~ 183 (392)
.+|+||||+++||..-|++
T Consensus 791 t~GGKIPiRWTAPEAIa~RKFTsASDVWSyGIVmWEVmSyGE 832 (996)
T KOG0196|consen 791 TLGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGE 832 (996)
T ss_pred ccCCccceeecChhHhhhcccCchhhccccceEEEEecccCC
Confidence 1299999999999444443
No 149
>KOG1026|consensus
Probab=99.79 E-value=1.6e-19 Score=180.79 Aligned_cols=172 Identities=22% Similarity=0.371 Sum_probs=129.6
Q ss_pred cCCCCCcceeEEEEEEEee-----cCcEEEEEEcCCCChh-HHHHHHHHHHH--------------------------HH
Q psy6828 49 SNPDSDFRYSAIFTPIGIY-----KGRIFAIKRIPKKSVD-ITRAMKKELKI--------------------------DI 96 (392)
Q Consensus 49 ~~~lg~G~~g~V~~~~~~~-----~~~~vAiK~~~~~~~~-~~~~~~~E~~~--------------------------~~ 96 (392)
.+.||+|+||+||+|.... +.+.||||.++...-. ....|++|++. +|
T Consensus 491 ~~eLGegaFGkVf~a~~~~l~p~~~~~lVAVK~LKd~a~~~~~~dF~REaeLla~l~H~nIVrLlGVC~~~~P~~MvFEY 570 (774)
T KOG1026|consen 491 KEELGEGAFGKVFLAEAYGLLPGQDEQLVAVKALKDKAENQARQDFRREAELLAELQHPNIVRLLGVCREGDPLCMVFEY 570 (774)
T ss_pred hhhhcCchhhhhhhhhccCCCCCccceehhHhhhcccccHHHHHHHHHHHHHHHhccCCCeEEEEEEEccCCeeEEEEEe
Confidence 7789999999999997543 2357999999876654 77889999998 33
Q ss_pred hhcCCc----------------------CCCHHHHHHHHHHHHHHHHHHhcCCcccccCCCCCceEEcCCceEEEecccc
Q psy6828 97 MENEDV----------------------KLDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLVDSRWVVKLADFGL 154 (392)
Q Consensus 97 l~~~~~----------------------~l~~~~~~~i~~qi~~~l~ylH~~~iiiHrDlKp~NIll~~~~~~kl~DFGl 154 (392)
+..+++ .|+..+.+.|+.||+.|+.||-++.. +||||-..|+|+.++..+||+|||+
T Consensus 571 m~~GDL~eFLra~sP~a~~~~~g~~~~~~L~~~q~L~iA~QIAaGM~YLs~~~F-VHRDLATRNCLVge~l~VKIsDfGL 649 (774)
T KOG1026|consen 571 MDHGDLHEFLRARSPKADKLASGQDTPPPLSTSQFLHIATQIAAGMEYLSSHHF-VHRDLATRNCLVGENLVVKISDFGL 649 (774)
T ss_pred cccccHHHHHHhhCCccccccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCcc-cccchhhhhceeccceEEEeccccc
Confidence 332211 38999999999999999999999999 9999999999999999999999999
Q ss_pred chhccccc-------------------------cccccccceeeeeeec---cCCCCcccccccccchhhhccCCHHHHH
Q psy6828 155 TEFKRDAE-------------------------YTGTDQHSFLQHTYHV---NRAGSTESLHCKCDEALLFEMLPRSVAE 206 (392)
Q Consensus 155 a~~~~~~~-------------------------~~~~d~~s~g~~~~~~---~~~~~~~~~d~~~~~~lL~~~lp~~v~~ 206 (392)
++..=+.. .+.+||||||+++||. ...|+.+ +-..++.+
T Consensus 650 sRdiYssDYYk~~~~t~lPIRWMppEsIly~kFTteSDVWs~GVvLWEIFsyG~QPy~g-------------lSn~EVIe 716 (774)
T KOG1026|consen 650 SRDIYSSDYYKVRGNTLLPIRWMPPESILYGKFTTESDVWSFGVVLWEIFSYGKQPYYG-------------LSNQEVIE 716 (774)
T ss_pred chhhhhhhhhcccCCceeeeecCCHHHhhcCcccchhhhhhhhhhhhhhhccccCcccc-------------cchHHHHH
Confidence 98542222 2344999999999992 2233322 44567777
Q ss_pred HhhcCCCccccccCceEEEeecccchhhhhccCChhhHHHhHHHHHHH
Q psy6828 207 QLRRGTSVEAESFDSVTIYFSDIVGFTAMSAESTPLQVVDFLNDLYTC 254 (392)
Q Consensus 207 ~l~~~~~~~~~~~~~vtvlf~DI~~ft~l~~~~~p~~l~~~Ln~~~~~ 254 (392)
.++++..+..+ +..|.++.+++-+++++
T Consensus 717 ~i~~g~lL~~P--------------------e~CP~~vY~LM~~CW~~ 744 (774)
T KOG1026|consen 717 CIRAGQLLSCP--------------------ENCPTEVYSLMLECWNE 744 (774)
T ss_pred HHHcCCcccCC--------------------CCCCHHHHHHHHHHhhc
Confidence 77777544322 23567777777666643
No 150
>KOG4279|consensus
Probab=99.78 E-value=5e-19 Score=172.58 Aligned_cols=126 Identities=23% Similarity=0.369 Sum_probs=103.3
Q ss_pred CCCCcceeEEEEEEEeecCcEEEEEEcCCCChhHHHHHHHHHHH-----------------------------------H
Q psy6828 51 PDSDFRYSAIFTPIGIYKGRIFAIKRIPKKSVDITRAMKKELKI-----------------------------------D 95 (392)
Q Consensus 51 ~lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~~~~~~~~~~E~~~-----------------------------------~ 95 (392)
.||+|+||+||-|++..+....|||.++.+.-+..+.+..|+.. +
T Consensus 582 VLGKGTYG~VYA~RD~~tqvrIaIKEIpekdsr~~QPLhEEIaLH~~LrHkNIVrYLGs~senGf~kIFMEqVPGGSLSs 661 (1226)
T KOG4279|consen 582 VLGKGTYGTVYAARDMDTQVRIAIKEIPEKDSREVQPLHEEIALHSTLRHKNIVRYLGSVSENGFFKIFMEQVPGGSLSS 661 (1226)
T ss_pred EeecCceeEEEeeccccceeEEEeeecccccchhhccHHHHHHHHHHHhhHhHHHHhhccCCCCeEEEEeecCCCCcHHH
Confidence 58999999999999999999999999987655544555555554 5
Q ss_pred HhhcCCcCC--CHHHHHHHHHHHHHHHHHHhcCCcccccCCCCCceEEc-CCceEEEeccccchhccccc-----cc---
Q psy6828 96 IMENEDVKL--DNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLVD-SRWVVKLADFGLTEFKRDAE-----YT--- 164 (392)
Q Consensus 96 ~l~~~~~~l--~~~~~~~i~~qi~~~l~ylH~~~iiiHrDlKp~NIll~-~~~~~kl~DFGla~~~~~~~-----~~--- 164 (392)
+++...+++ ++..+-.+.+||++||.|||++.| +|||||-+|+|++ -.|.+||+|||.++.+..-. .+
T Consensus 662 LLrskWGPlKDNEstm~fYtkQILeGLkYLHen~I-VHRDIKGDNVLvNTySGvlKISDFGTsKRLAginP~TETFTGTL 740 (1226)
T KOG4279|consen 662 LLRSKWGPLKDNESTMNFYTKQILEGLKYLHENKI-VHRDIKGDNVLVNTYSGVLKISDFGTSKRLAGINPCTETFTGTL 740 (1226)
T ss_pred HHHhccCCCccchhHHHHHHHHHHHHhhhhhhcce-eeccccCCcEEEeeccceEEecccccchhhccCCccccccccch
Confidence 556555566 888899999999999999999999 9999999999996 56999999999998653211 11
Q ss_pred -----------------cccccceeeeeee
Q psy6828 165 -----------------GTDQHSFLQHTYH 177 (392)
Q Consensus 165 -----------------~~d~~s~g~~~~~ 177 (392)
..|+|||||+..|
T Consensus 741 QYMAPEvIDqG~RGYG~aADIWS~GCT~vE 770 (1226)
T KOG4279|consen 741 QYMAPEVIDQGPRGYGKAADIWSFGCTMVE 770 (1226)
T ss_pred hhhChHhhccCCcCCCchhhhhhccceeEe
Confidence 1299999999998
No 151
>cd05058 PTKc_Met_Ron Catalytic domain of the Protein Tyrosine Kinases, Met and Ron. Protein Tyrosine Kinase (PTK) family; Met and Ron; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Met and Ron are receptor tyr kinases (RTKs) composed of an alpha-beta heterodimer. The extracellular alpha chain is disulfide linked to the beta chain, which contains an extracellular ligand-binding region with a sema domain, a PSI domain and four IPT repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Met binds to the ligand, hepatocyte growth factor/scatter factor (HGF/SF), and is also ca
Probab=99.78 E-value=1.9e-18 Score=158.72 Aligned_cols=108 Identities=22% Similarity=0.325 Sum_probs=86.0
Q ss_pred CCCCCcceeEEEEEEEeec---CcEEEEEEcCCCC-hhHHHHHHHHHHH-------------------------------
Q psy6828 50 NPDSDFRYSAIFTPIGIYK---GRIFAIKRIPKKS-VDITRAMKKELKI------------------------------- 94 (392)
Q Consensus 50 ~~lg~G~~g~V~~~~~~~~---~~~vAiK~~~~~~-~~~~~~~~~E~~~------------------------------- 94 (392)
+.||+|+||.||+|.+... ...||+|.+.... ....+.+.+|+.+
T Consensus 1 ~~lg~g~~g~v~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~lv~e~~~ 80 (262)
T cd05058 1 RVIGKGHFGCVYHGTLIDSDGQKIHCAVKSLNRITDLEEVEQFLKEGIIMKDFSHPNVLSLLGICLPSEGSPLVVLPYMK 80 (262)
T ss_pred CcccccCCceEEEEEEecCCCceEEEEEEecCccCCHHHHHHHHHHHHHHccCCCCCcceEEEEeecCCCCcEEEEecCC
Confidence 3589999999999986543 4579999986432 3445667777665
Q ss_pred -----HHhhcCCcCCCHHHHHHHHHHHHHHHHHHhcCCcccccCCCCCceEEcCCceEEEeccccchhc
Q psy6828 95 -----DIMENEDVKLDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLVDSRWVVKLADFGLTEFK 158 (392)
Q Consensus 95 -----~~l~~~~~~l~~~~~~~i~~qi~~~l~ylH~~~iiiHrDlKp~NIll~~~~~~kl~DFGla~~~ 158 (392)
+++......+++..+..++.|++.||.|||+.++ +||||||+|||+++++.+||+|||+++..
T Consensus 81 ~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i-~H~dlk~~nili~~~~~~kl~dfg~~~~~ 148 (262)
T cd05058 81 HGDLRNFIRSETHNPTVKDLIGFGLQVAKGMEYLASKKF-VHRDLAARNCMLDESFTVKVADFGLARDI 148 (262)
T ss_pred CCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCc-cccccCcceEEEcCCCcEEECCccccccc
Confidence 3333333346778888999999999999999999 99999999999999999999999998643
No 152
>KOG0666|consensus
Probab=99.78 E-value=1.8e-19 Score=161.10 Aligned_cols=116 Identities=25% Similarity=0.346 Sum_probs=87.8
Q ss_pred eeccCCCCCcceeEEEEEEEeecC----cEEEEEEcCCCCh------hHH--HHHHHHHHH-------------------
Q psy6828 46 SLSSNPDSDFRYSAIFTPIGIYKG----RIFAIKRIPKKSV------DIT--RAMKKELKI------------------- 94 (392)
Q Consensus 46 ~~~~~~lg~G~~g~V~~~~~~~~~----~~vAiK~~~~~~~------~~~--~~~~~E~~~------------------- 94 (392)
|.....+|+|+||.||++....++ +.||||+++..+. ... -.+.+|+..
T Consensus 26 ye~ig~Ig~GTYG~VykA~~~~~n~kr~k~yAiKkfk~~kd~tGiS~SAcREiaL~REl~h~nvi~Lv~Vfl~~d~~v~l 105 (438)
T KOG0666|consen 26 YEGIGKIGRGTYGKVYKAVRKNTNDKRTKEYAIKKFKGEKDGTGISMSACREIALLRELKHPNVISLVKVFLSHDKKVWL 105 (438)
T ss_pred hhccceecccccceeeEeeeccCCcccchhhHHHHHhccCCCCCcCHHHHHHHHHHHHhcCCcchhHHHHHhccCceEEE
Confidence 445677999999999999766543 3799999976622 111 123444433
Q ss_pred ----------HHhhc----CCcCCCHHHHHHHHHHHHHHHHHHhcCCcccccCCCCCceEEcCC----ceEEEeccccch
Q psy6828 95 ----------DIMEN----EDVKLDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLVDSR----WVVKLADFGLTE 156 (392)
Q Consensus 95 ----------~~l~~----~~~~l~~~~~~~i~~qi~~~l~ylH~~~iiiHrDlKp~NIll~~~----~~~kl~DFGla~ 156 (392)
++++. ....++...+..++.||+.|+.|||++-+ +||||||.|||+..+ |.+||+|||+++
T Consensus 106 ~fdYAEhDL~~II~fHr~~~~~~lp~~mvKsilwQil~Gv~YLH~NWv-lHRDLKPaNIlvmgdgperG~VKIaDlGlaR 184 (438)
T KOG0666|consen 106 LFDYAEHDLWHIIKFHRASKAKQLPRSMVKSILWQILDGVHYLHSNWV-LHRDLKPANILVMGDGPERGRVKIADLGLAR 184 (438)
T ss_pred EehhhhhhHHHHHHHhccchhccCCHHHHHHHHHHHHhhhHHHhhhhe-eeccCCcceEEEeccCCccCeeEeecccHHH
Confidence 11111 22368999999999999999999999888 999999999999877 899999999999
Q ss_pred hccccc
Q psy6828 157 FKRDAE 162 (392)
Q Consensus 157 ~~~~~~ 162 (392)
.+.+..
T Consensus 185 ~~~~pl 190 (438)
T KOG0666|consen 185 LFNNPL 190 (438)
T ss_pred Hhhccc
Confidence 876543
No 153
>cd07873 STKc_PCTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-1 kinase. Serine/Threonine Kinases (STKs), PCTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-1 is expressed ubiquitously and is localized in the cytoplasm. Its kinase activity is cell cycle dependent and peaks at the S and G2 phases. PCTAIRE-1 is highly expressed in the brain and may pl
Probab=99.78 E-value=3.3e-19 Score=167.56 Aligned_cols=113 Identities=21% Similarity=0.358 Sum_probs=92.3
Q ss_pred eeeccCCCCCcceeEEEEEEEeecCcEEEEEEcCCCCh-hHHHHHHHHHHH-----------------------------
Q psy6828 45 VSLSSNPDSDFRYSAIFTPIGIYKGRIFAIKRIPKKSV-DITRAMKKELKI----------------------------- 94 (392)
Q Consensus 45 ~~~~~~~lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~~-~~~~~~~~E~~~----------------------------- 94 (392)
.|...+.||+|+||.||++.+..+++.||+|.+..... .....+.+|+.+
T Consensus 7 ~y~~~~~lg~g~~g~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~nI~~~~~~~~~~~~~~lv~e~~ 86 (301)
T cd07873 7 TYIKLDKLGEGTYATVYKGRSKLTDNLVALKEIRLEHEEGAPCTAIREVSLLKDLKHANIVTLHDIIHTEKSLTLVFEYL 86 (301)
T ss_pred ceEEeeEeccCcCEEEEEEEEcCCCcEEEEEEEecccccCchhHHHHHHHHHHhcCCCCcceEEEEEecCCeEEEEEecc
Confidence 35667789999999999999999999999999865432 222345556655
Q ss_pred -----HHhhcCCcCCCHHHHHHHHHHHHHHHHHHhcCCcccccCCCCCceEEcCCceEEEeccccchhc
Q psy6828 95 -----DIMENEDVKLDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLVDSRWVVKLADFGLTEFK 158 (392)
Q Consensus 95 -----~~l~~~~~~l~~~~~~~i~~qi~~~l~ylH~~~iiiHrDlKp~NIll~~~~~~kl~DFGla~~~ 158 (392)
+++......+++..+..++.|++.||.|||+.++ +||||||+||+++.++.+||+|||++...
T Consensus 87 ~~~l~~~l~~~~~~~~~~~~~~~~~qi~~aL~~lH~~~i-~H~dlkp~Nil~~~~~~~kl~dfg~~~~~ 154 (301)
T cd07873 87 DKDLKQYLDDCGNSINMHNVKLFLFQLLRGLNYCHRRKV-LHRDLKPQNLLINERGELKLADFGLARAK 154 (301)
T ss_pred ccCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCe-eCCCCCHHHEEECCCCcEEECcCcchhcc
Confidence 2233333468899999999999999999999999 99999999999999999999999998653
No 154
>cd05109 PTKc_HER2 Catalytic domain of the Protein Tyrosine Kinase, HER2. Protein Tyrosine Kinase (PTK) family; HER2 (ErbB2, HER2/neu); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER2 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve
Probab=99.78 E-value=9.6e-19 Score=162.48 Aligned_cols=112 Identities=24% Similarity=0.347 Sum_probs=91.5
Q ss_pred eeccCCCCCcceeEEEEEEEeecCc----EEEEEEcCCCCh-hHHHHHHHHHHH--------------------------
Q psy6828 46 SLSSNPDSDFRYSAIFTPIGIYKGR----IFAIKRIPKKSV-DITRAMKKELKI-------------------------- 94 (392)
Q Consensus 46 ~~~~~~lg~G~~g~V~~~~~~~~~~----~vAiK~~~~~~~-~~~~~~~~E~~~-------------------------- 94 (392)
+...+.||+|+||+||+|.+..+++ .||+|.+..... ...+.+.+|..+
T Consensus 9 ~~~~~~lg~G~~g~vy~~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~l~~~ 88 (279)
T cd05109 9 LKKVKVLGSGAFGTVYKGIWIPDGENVKIPVAIKVLRENTSPKANKEILDEAYVMAGVGSPYVCRLLGICLTSTVQLVTQ 88 (279)
T ss_pred eeeeeecCCCCCceEEEEEEecCCCccceEEEEEEecCCCCHHHHHHHHHHHHHHHhcCCCCCceEEEEEcCCCcEEEEE
Confidence 3446779999999999999877776 489999875433 334556667655
Q ss_pred --------HHhhcCCcCCCHHHHHHHHHHHHHHHHHHhcCCcccccCCCCCceEEcCCceEEEeccccchhc
Q psy6828 95 --------DIMENEDVKLDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLVDSRWVVKLADFGLTEFK 158 (392)
Q Consensus 95 --------~~l~~~~~~l~~~~~~~i~~qi~~~l~ylH~~~iiiHrDlKp~NIll~~~~~~kl~DFGla~~~ 158 (392)
+++......+++..+..++.|++.||.|||++++ +||||||+|||+++++.+||+|||+++..
T Consensus 89 ~~~~g~l~~~l~~~~~~~~~~~~~~~~~qi~~~L~~lH~~~i-iH~dlkp~Nil~~~~~~~kL~dfG~~~~~ 159 (279)
T cd05109 89 LMPYGCLLDYVRENKDRIGSQDLLNWCVQIAKGMSYLEEVRL-VHRDLAARNVLVKSPNHVKITDFGLARLL 159 (279)
T ss_pred cCCCCCHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHHCCe-eccccccceEEEcCCCcEEECCCCceeec
Confidence 3333334468999999999999999999999999 99999999999999999999999998754
No 155
>cd05096 PTKc_DDR1 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 1. Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 1 (DDR1) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR1 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR1 binds to all collagens tested to date (types I-IV). It is widely expressed in many tissues. It is abundant in the brain and is also found in k
Probab=99.78 E-value=7.2e-19 Score=165.50 Aligned_cols=113 Identities=24% Similarity=0.353 Sum_probs=88.8
Q ss_pred eeeccCCCCCcceeEEEEEEEee----------------cCcEEEEEEcCCCCh-hHHHHHHHHHHH-------------
Q psy6828 45 VSLSSNPDSDFRYSAIFTPIGIY----------------KGRIFAIKRIPKKSV-DITRAMKKELKI------------- 94 (392)
Q Consensus 45 ~~~~~~~lg~G~~g~V~~~~~~~----------------~~~~vAiK~~~~~~~-~~~~~~~~E~~~------------- 94 (392)
.|...+.||+|+||.||+|.+.. ++..||+|.+..... .....+.+|+.+
T Consensus 6 ~~~~~~~lg~G~fg~V~~~~~~~~~~~~~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~ 85 (304)
T cd05096 6 HLLFKEKLGEGQFGEVHLCEVVNPQDLPTLQFPFNVRKGRPLLVAVKILRPDANKNARNDFLKEVKILSRLKDPNIIRLL 85 (304)
T ss_pred hCeeeeEecccCCeEEEEEEeccCcccccccccccccCCcceEEEEEEecCCCCHHHHHHHHHHHHHHhhcCCCCeeEEE
Confidence 45556789999999999997532 344799999976532 345567888776
Q ss_pred -------------HHhhcCC---------------------------cCCCHHHHHHHHHHHHHHHHHHhcCCcccccCC
Q psy6828 95 -------------DIMENED---------------------------VKLDNMFIASLVADILRGMLYLHDSALRYHGNL 134 (392)
Q Consensus 95 -------------~~l~~~~---------------------------~~l~~~~~~~i~~qi~~~l~ylH~~~iiiHrDl 134 (392)
+++..+. ..+++..+..++.|++.||.|||++++ +||||
T Consensus 86 ~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~~~i-vH~dl 164 (304)
T cd05096 86 GVCVDEDPLCMITEYMENGDLNQFLSSHHLDDKEENGNDAVPPAHCLPAISYSSLLHVALQIASGMKYLSSLNF-VHRDL 164 (304)
T ss_pred EEEecCCceEEEEecCCCCcHHHHHHhccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHCCc-cccCc
Confidence 2221111 135777889999999999999999999 99999
Q ss_pred CCCceEEcCCceEEEeccccchhc
Q psy6828 135 KASNCLVDSRWVVKLADFGLTEFK 158 (392)
Q Consensus 135 Kp~NIll~~~~~~kl~DFGla~~~ 158 (392)
||+|||++.++.+||+|||+++..
T Consensus 165 kp~Nill~~~~~~kl~DfG~~~~~ 188 (304)
T cd05096 165 ATRNCLVGENLTIKIADFGMSRNL 188 (304)
T ss_pred chhheEEcCCccEEECCCccceec
Confidence 999999999999999999998754
No 156
>cd05630 STKc_GRK6 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 6. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK6 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK6 is widely expressed in many tissues. t is expressed as
Probab=99.78 E-value=4.6e-19 Score=165.41 Aligned_cols=109 Identities=18% Similarity=0.204 Sum_probs=89.7
Q ss_pred cCCCCCcceeEEEEEEEeecCcEEEEEEcCCCCh---hHHHHHHHHHHH-------------------------------
Q psy6828 49 SNPDSDFRYSAIFTPIGIYKGRIFAIKRIPKKSV---DITRAMKKELKI------------------------------- 94 (392)
Q Consensus 49 ~~~lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~~---~~~~~~~~E~~~------------------------------- 94 (392)
.+.||+|+||.||++.+..+++.||+|.+.+... ...+.+.+|+.+
T Consensus 5 ~~~ig~G~~g~v~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~i~~~~~~~~~~~~~~lv~e~~~g 84 (285)
T cd05630 5 YRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGESMALNEKQILEKVNSRFVVSLAYAYETKDALCLVLTLMNG 84 (285)
T ss_pred eEEeecCCCeEEEEEEEcCCCceEEEEEEehhhccchHHHHHHHHHHHHHHhCCCCCeeeeeEEEecCCEEEEEEEecCC
Confidence 4568999999999999999999999999875432 223445667766
Q ss_pred ----HHhh-cCCcCCCHHHHHHHHHHHHHHHHHHhcCCcccccCCCCCceEEcCCceEEEeccccchhc
Q psy6828 95 ----DIME-NEDVKLDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLVDSRWVVKLADFGLTEFK 158 (392)
Q Consensus 95 ----~~l~-~~~~~l~~~~~~~i~~qi~~~l~ylH~~~iiiHrDlKp~NIll~~~~~~kl~DFGla~~~ 158 (392)
+++. .....+++..+..++.|++.||.|||++++ +||||||+||+++.++.++|+|||++...
T Consensus 85 ~~L~~~l~~~~~~~l~~~~~~~~~~qi~~~l~~lH~~~i-iH~dikp~Nil~~~~~~~~l~Dfg~~~~~ 152 (285)
T cd05630 85 GDLKFHIYHMGEAGFEEGRAVFYAAEICCGLEDLHQERI-VYRDLKPENILLDDHGHIRISDLGLAVHV 152 (285)
T ss_pred CcHHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHhCCE-EeCCCCHHHEEECCCCCEEEeeccceeec
Confidence 2221 122358999999999999999999999999 99999999999999999999999998654
No 157
>cd05104 PTKc_Kit Catalytic domain of the Protein Tyrosine Kinase, Kit. Protein Tyrosine Kinase (PTK) family; Kit (or c-Kit); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Kit is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of Kit to its ligand, the stem-cell factor (SCF), leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. Kit is important in the development of melanocytes, germ cells, mast cells, hematopoietic stem ce
Probab=99.78 E-value=1.4e-18 Score=168.62 Aligned_cols=139 Identities=18% Similarity=0.229 Sum_probs=102.4
Q ss_pred ceeeeccccceeeeeeccccccc----cceeeeccCCCCCcceeEEEEEEE-----eecCcEEEEEEcCCCC-hhHHHHH
Q psy6828 19 TVVKLVDNHKLFDWFCSWFQNVH----TSQVSLSSNPDSDFRYSAIFTPIG-----IYKGRIFAIKRIPKKS-VDITRAM 88 (392)
Q Consensus 19 ~~l~~l~hpniv~~~~~~~~~~~----~~~~~~~~~~lg~G~~g~V~~~~~-----~~~~~~vAiK~~~~~~-~~~~~~~ 88 (392)
+++..++-.|-+.+......... ....+...+.||+|+||.||+|.. ..++..||+|+++... ....+.+
T Consensus 6 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~LG~G~fG~V~~~~~~~~~~~~~~~~vavK~l~~~~~~~~~~~~ 85 (375)
T cd05104 6 KVVEEINGNNYVYIDPTQLPYDHKWEFPRNRLSFGKTLGAGAFGKVVEATAYGLFKSDAAMTVAVKMLKPSAHLTEREAL 85 (375)
T ss_pred eeeeeecCceEEEecCCCCCCccccccchHHeehhheecCCccceEEEEEEeccccCccceeEEEEeccCCcCcHHHHHH
Confidence 45667777777755444332221 123466689999999999999974 2456789999997543 2334556
Q ss_pred HHHHHH---------------------------HHh---------hc---------------------------------
Q psy6828 89 KKELKI---------------------------DIM---------EN--------------------------------- 99 (392)
Q Consensus 89 ~~E~~~---------------------------~~l---------~~--------------------------------- 99 (392)
.+|+.+ +|+ ..
T Consensus 86 ~~Ei~il~~l~~HpnIv~l~~~~~~~~~~~lv~E~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 165 (375)
T cd05104 86 MSELKVLSYLGNHINIVNLLGACTVGGPTLVITEYCCYGDLLNFLRRKRDSFICPKHEDHAEAALYKNLLHQREMSCDSL 165 (375)
T ss_pred HHHHHHHHHhcCCcceeeeeeeeccCCcceeeehhccCCcHHHHHHhcccccccccccchhhhHHHHhhhhhhcccchhh
Confidence 677665 111 10
Q ss_pred -----------------------------------------CCcCCCHHHHHHHHHHHHHHHHHHhcCCcccccCCCCCc
Q psy6828 100 -----------------------------------------EDVKLDNMFIASLVADILRGMLYLHDSALRYHGNLKASN 138 (392)
Q Consensus 100 -----------------------------------------~~~~l~~~~~~~i~~qi~~~l~ylH~~~iiiHrDlKp~N 138 (392)
....+++..+..++.||+.||.|||++++ +||||||+|
T Consensus 166 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~~l~~lH~~~i-vH~Dlkp~N 244 (375)
T cd05104 166 NEYMDMKPGVSYVVPTKADKRRSVRSGSYIDQDVTSEILEEDELALDTEDLLSFSYQVAKGMSFLASKNC-IHRDLAARN 244 (375)
T ss_pred hhhhhcCCCcccccccccccccccccceecccccHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHCCe-eccCCchhh
Confidence 01247888899999999999999999999 999999999
Q ss_pred eEEcCCceEEEeccccchhc
Q psy6828 139 CLVDSRWVVKLADFGLTEFK 158 (392)
Q Consensus 139 Ill~~~~~~kl~DFGla~~~ 158 (392)
||++.++.+||+|||+++..
T Consensus 245 ill~~~~~~kl~DfG~a~~~ 264 (375)
T cd05104 245 ILLTHGRITKICDFGLARDI 264 (375)
T ss_pred EEEECCCcEEEecCccceec
Confidence 99999999999999998754
No 158
>cd07868 STKc_CDK8 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 8. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK8 can act as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the multi-subunit core Mediator complex, a cofactor that is involved in regulating RNA p
Probab=99.78 E-value=1e-18 Score=165.47 Aligned_cols=150 Identities=23% Similarity=0.319 Sum_probs=103.9
Q ss_pred cCCCCCcceeEEEEEEEe--ecCcEEEEEEcCCCChhHHHHHHHHHHH--------------------------------
Q psy6828 49 SNPDSDFRYSAIFTPIGI--YKGRIFAIKRIPKKSVDITRAMKKELKI-------------------------------- 94 (392)
Q Consensus 49 ~~~lg~G~~g~V~~~~~~--~~~~~vAiK~~~~~~~~~~~~~~~E~~~-------------------------------- 94 (392)
...||+|+||+||+|.++ .+++.||+|.+...... ..+.+|+.+
T Consensus 6 ~~~lG~G~~g~Vy~~~~~~~~~~~~~aiK~~~~~~~~--~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~lv~e~~~ 83 (317)
T cd07868 6 GCKVGRGTYGHVYKAKRKDGKDDRDYALKQIEGTGIS--MSACREIALLRELKHPNVISLQKVFLSHADRKVWLLFDYAE 83 (317)
T ss_pred ccccccCCCeEEEEEEEccCCCCceEEEEEECCCCCc--HHHHHHHHHHHhcCCCCCcceeeeEecCCCcEEEEEEeccC
Confidence 568999999999999865 36789999999765332 234556555
Q ss_pred ----HHhhc--------CCcCCCHHHHHHHHHHHHHHHHHHhcCCcccccCCCCCceEE----cCCceEEEeccccchhc
Q psy6828 95 ----DIMEN--------EDVKLDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLV----DSRWVVKLADFGLTEFK 158 (392)
Q Consensus 95 ----~~l~~--------~~~~l~~~~~~~i~~qi~~~l~ylH~~~iiiHrDlKp~NIll----~~~~~~kl~DFGla~~~ 158 (392)
+++.. ....+++..+..++.|++.||.|||++++ +||||||+|||+ +.++.+||+|||+++..
T Consensus 84 ~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~LH~~~i-vHrDlkp~Nil~~~~~~~~~~~kl~DfG~a~~~ 162 (317)
T cd07868 84 HDLWHIIKFHRASKANKKPVQLPRGMVKSLLYQILDGIHYLHANWV-LHRDLKPANILVMGEGPERGRVKIADMGFARLF 162 (317)
T ss_pred CCHHHHHHhcccccccCCcccCCHHHHHHHHHHHHHHHHHHHhCCE-EcCCCCHHHEEEecCCCCcCcEEEeecCceecc
Confidence 11110 11248889999999999999999999999 999999999999 45578999999999865
Q ss_pred ccccccccc-ccceeeeeeeccCC-----CCcccccccccchhhhccCC
Q psy6828 159 RDAEYTGTD-QHSFLQHTYHVNRA-----GSTESLHCKCDEALLFEMLP 201 (392)
Q Consensus 159 ~~~~~~~~d-~~s~g~~~~~~~~~-----~~~~~~d~~~~~~lL~~~lp 201 (392)
........+ ....|...|.+||. .++...|+|+.+.++..++.
T Consensus 163 ~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~ 211 (317)
T cd07868 163 NSPLKPLADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLT 211 (317)
T ss_pred CCCCccccccCCccccccccCCHHHcCCCCcCchhhHHHHHHHHHHHHh
Confidence 433211111 12234555555551 23345666666666665543
No 159
>PF00069 Pkinase: Protein kinase domain Protein kinase; unclassified specificity. Serine/Threonine protein kinases, catalytic domain Tyrosine kinase, catalytic domain; InterPro: IPR017442 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Eukaryotic protein kinases [, , , , ] are enzymes that belong to a very extensive family of proteins which share a conserved catalytic core common with both serine/threonine and tyrosine protein kinases. There are a number of conserved regions in the catalytic domain of protein kinases. In the N-terminal extremity of the catalytic domain there is a glycine-rich stretch of residues in the vicinity of a lysine residue, which has been shown to be involved in ATP binding. In the central part of the catalytic domain there is a conserved aspartic acid residue which is important for the catalytic activity of the enzyme []. This entry includes protein kinases from eukaryotes and viruses and may include some bacterial hits too.; GO: 0004672 protein kinase activity, 0005524 ATP binding, 0006468 protein phosphorylation; PDB: 3GC7_A 3ZYA_A 3MPT_A 3NEW_A 3MVM_A 1R3C_A 2FST_X 3E93_A 3HV5_B 3OCG_A ....
Probab=99.78 E-value=2.3e-19 Score=164.39 Aligned_cols=109 Identities=25% Similarity=0.363 Sum_probs=91.2
Q ss_pred eccCCCCCcceeEEEEEEEeecCcEEEEEEcCCCChhHHH--HHHHHHHH------------------------------
Q psy6828 47 LSSNPDSDFRYSAIFTPIGIYKGRIFAIKRIPKKSVDITR--AMKKELKI------------------------------ 94 (392)
Q Consensus 47 ~~~~~lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~~~~~~--~~~~E~~~------------------------------ 94 (392)
...+.||+|+||+||++.+..+++.||+|.+......... ...+|+.+
T Consensus 2 ~~~~~lg~G~~g~v~~~~~~~~~~~~~~K~~~~~~~~~~~~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~~v~~~~~ 81 (260)
T PF00069_consen 2 RLVKKLGSGGFGTVYKAKNKKNGQKVAVKIIDKSEIEEEEREENIREIKILRRLRHPNIVQILDVFQDDNYLYIVMEYCP 81 (260)
T ss_dssp EEEEEEEEESSEEEEEEEETTTTEEEEEEEEESTTHHHHHHHHHHHHHHHHHHHTBTTBCHEEEEEEESSEEEEEEEEET
T ss_pred EEeEEEEeCCCEEEEEEEECCCCeEEEEEEeccccccccccchhhhhhhccccccccccccccccccccccccccccccc
Confidence 4466799999999999999999999999999887653322 22335554
Q ss_pred -----HHhhcCCcCCCHHHHHHHHHHHHHHHHHHhcCCcccccCCCCCceEEcCCceEEEeccccchh
Q psy6828 95 -----DIMENEDVKLDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLVDSRWVVKLADFGLTEF 157 (392)
Q Consensus 95 -----~~l~~~~~~l~~~~~~~i~~qi~~~l~ylH~~~iiiHrDlKp~NIll~~~~~~kl~DFGla~~ 157 (392)
+++. ....+++.++..++.|++.||.|||++++ +|+||||+||+++.++.++|+|||.+..
T Consensus 82 ~~~L~~~l~-~~~~~~~~~~~~~~~qi~~~L~~Lh~~~i-~H~dikp~NIl~~~~~~~~l~Dfg~~~~ 147 (260)
T PF00069_consen 82 GGSLQDYLQ-KNKPLSEEEILKIAYQILEALAYLHSKGI-VHRDIKPENILLDENGEVKLIDFGSSVK 147 (260)
T ss_dssp TEBHHHHHH-HHSSBBHHHHHHHHHHHHHHHHHHHHTTE-EESSBSGGGEEESTTSEEEESSGTTTEE
T ss_pred ccccccccc-ccccccccccccccccccccccccccccc-cccccccccccccccccccccccccccc
Confidence 4444 22368999999999999999999999999 9999999999999999999999999864
No 160
>cd05084 PTKc_Fes Catalytic domain of the Protein Tyrosine Kinase, Fes. Protein Tyrosine Kinase (PTK) family; Fes (or Fps) kinase subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr kinase activity. Fes kinase is expressed in myeloid, vascular
Probab=99.78 E-value=2.2e-18 Score=157.43 Aligned_cols=108 Identities=23% Similarity=0.353 Sum_probs=91.5
Q ss_pred CCCCCcceeEEEEEEEeecCcEEEEEEcCCCC-hhHHHHHHHHHHH----------------------------------
Q psy6828 50 NPDSDFRYSAIFTPIGIYKGRIFAIKRIPKKS-VDITRAMKKELKI---------------------------------- 94 (392)
Q Consensus 50 ~~lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~-~~~~~~~~~E~~~---------------------------------- 94 (392)
+.||+|+||.||++.+..+++.||+|.+.... ......+.+|+.+
T Consensus 1 ~~lg~g~~g~vy~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L 80 (252)
T cd05084 1 ERIGRGNFGEVFSGRLRADNTPVAVKSCRETLPPDLKAKFLQEARILKQYSHPNIVRLIGVCTQKQPIYIVMELVQGGDF 80 (252)
T ss_pred CccCcccCccEEEEEEecCCceEEEEecCccCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEcCCCCeEEEEeeccCCcH
Confidence 36899999999999999999999999886543 2345667788766
Q ss_pred -HHhhcCCcCCCHHHHHHHHHHHHHHHHHHhcCCcccccCCCCCceEEcCCceEEEeccccchhc
Q psy6828 95 -DIMENEDVKLDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLVDSRWVVKLADFGLTEFK 158 (392)
Q Consensus 95 -~~l~~~~~~l~~~~~~~i~~qi~~~l~ylH~~~iiiHrDlKp~NIll~~~~~~kl~DFGla~~~ 158 (392)
+++......+++..+..++.|++.||.|||++++ +||||||+||+++.++.+||+|||++...
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~~qi~~~L~~lH~~~i-~H~dl~p~nil~~~~~~~kl~dfg~~~~~ 144 (252)
T cd05084 81 LTFLRTEGPRLKVKELIQMVENAAAGMEYLESKHC-IHRDLAARNCLVTEKNVLKISDFGMSREE 144 (252)
T ss_pred HHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhCCc-cccccchheEEEcCCCcEEECccccCccc
Confidence 3444333468999999999999999999999999 99999999999999999999999998753
No 161
>cd05116 PTKc_Syk Catalytic domain of the Protein Tyrosine Kinase, Spleen tyrosine kinase. Protein Tyrosine Kinase (PTK) family; Spleen tyrosine kinase (Syk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk, together with Zap-70, form the Syk subfamily of kinases which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Syk was first cloned from the spleen, and its function in hematopoietic cells is well-established. Syk is involved in the signaling downstream of activated receptors (including B-cell and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferatio
Probab=99.78 E-value=5.3e-19 Score=162.21 Aligned_cols=106 Identities=19% Similarity=0.325 Sum_probs=87.2
Q ss_pred CCCCcceeEEEEEEE--eecCcEEEEEEcCCCCh--hHHHHHHHHHHH--------------------------------
Q psy6828 51 PDSDFRYSAIFTPIG--IYKGRIFAIKRIPKKSV--DITRAMKKELKI-------------------------------- 94 (392)
Q Consensus 51 ~lg~G~~g~V~~~~~--~~~~~~vAiK~~~~~~~--~~~~~~~~E~~~-------------------------------- 94 (392)
.||+|+||.||+|.. ..+++.+|+|.+..... ...+.+.+|+.+
T Consensus 2 ~lg~G~~g~v~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~lv~e~~~~~~ 81 (257)
T cd05116 2 ELGSGNFGTVKKGMYKMKKSEKTVAVKILKNDNNDPALKDELLREANVMQQLDNPYIVRMIGICEAESWMLVMELAELGP 81 (257)
T ss_pred cCCCcCCcceEEeEEecCCCceEEEEEEccCCCCcHHHHHHHHHHHHHHHhCCCCCcceEEEEEcCCCcEEEEecCCCCc
Confidence 589999999999964 35678999999865432 345567777665
Q ss_pred --HHhhcCCcCCCHHHHHHHHHHHHHHHHHHhcCCcccccCCCCCceEEcCCceEEEeccccchhc
Q psy6828 95 --DIMENEDVKLDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLVDSRWVVKLADFGLTEFK 158 (392)
Q Consensus 95 --~~l~~~~~~l~~~~~~~i~~qi~~~l~ylH~~~iiiHrDlKp~NIll~~~~~~kl~DFGla~~~ 158 (392)
+++... ..+++..+..++.|++.||.|||++++ +||||||+||+++.++.+||+|||+++..
T Consensus 82 L~~~l~~~-~~~~~~~~~~i~~qi~~al~~lH~~~i-~H~dlkp~nill~~~~~~kl~Dfg~~~~~ 145 (257)
T cd05116 82 LNKFLQKN-KHVTEKNITELVHQVSMGMKYLEETNF-VHRDLAARNVLLVTQHYAKISDFGLSKAL 145 (257)
T ss_pred HHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHCCE-eecccchhhEEEcCCCeEEECCCcccccc
Confidence 333222 258999999999999999999999999 99999999999999999999999998754
No 162
>cd06649 PKc_MEK2 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 2. Protein kinases (PKs), MAP/ERK Kinase (MEK) 2 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK2 is a dual-specificity PK that phosphorylates and activates the downst
Probab=99.77 E-value=8.4e-19 Score=167.24 Aligned_cols=130 Identities=22% Similarity=0.270 Sum_probs=102.9
Q ss_pred eeccCCCCCcceeEEEEEEEeecCcEEEEEEcCCCCh-hHHHHHHHHHHH------------------------------
Q psy6828 46 SLSSNPDSDFRYSAIFTPIGIYKGRIFAIKRIPKKSV-DITRAMKKELKI------------------------------ 94 (392)
Q Consensus 46 ~~~~~~lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~~-~~~~~~~~E~~~------------------------------ 94 (392)
|.....||+|+||.||++.+..++..||+|.+..... ...+.+.+|+.+
T Consensus 7 y~~~~~lg~G~~g~V~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~ 86 (331)
T cd06649 7 FERISELGAGNGGVVTKVQHKPSGLIMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISICMEHMD 86 (331)
T ss_pred ceEEEeecCCCCEEEEEEEECCCCcEEEEEEeecccCHHHHHHHHHHHHHHHHCCCCCCCeEEEEEEECCEEEEEeecCC
Confidence 4445679999999999999999999999999976432 345667788776
Q ss_pred -----HHhhcCCcCCCHHHHHHHHHHHHHHHHHHhcC-CcccccCCCCCceEEcCCceEEEeccccchhccccc------
Q psy6828 95 -----DIMENEDVKLDNMFIASLVADILRGMLYLHDS-ALRYHGNLKASNCLVDSRWVVKLADFGLTEFKRDAE------ 162 (392)
Q Consensus 95 -----~~l~~~~~~l~~~~~~~i~~qi~~~l~ylH~~-~iiiHrDlKp~NIll~~~~~~kl~DFGla~~~~~~~------ 162 (392)
+++... ..+++..+..++.|++.||.|||++ ++ +||||||+|||++.++.+||+|||+++......
T Consensus 87 ~~~L~~~l~~~-~~~~~~~~~~~~~~i~~~l~~lH~~~~i-vH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~g 164 (331)
T cd06649 87 GGSLDQVLKEA-KRIPEEILGKVSIAVLRGLAYLREKHQI-MHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANSFVG 164 (331)
T ss_pred CCcHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHhhcCCE-EcCCCChhhEEEcCCCcEEEccCcccccccccccccCCC
Confidence 223222 2588999999999999999999986 57 999999999999999999999999987542211
Q ss_pred ---------------cccccccceeeeeee
Q psy6828 163 ---------------YTGTDQHSFLQHTYH 177 (392)
Q Consensus 163 ---------------~~~~d~~s~g~~~~~ 177 (392)
....|+||+|+++|+
T Consensus 165 ~~~y~aPE~~~~~~~~~~~DiwslG~il~e 194 (331)
T cd06649 165 TRSYMSPERLQGTHYSVQSDIWSMGLSLVE 194 (331)
T ss_pred CcCcCCHhHhcCCCCCchHhHHHHHHHHHH
Confidence 112388888888887
No 163
>cd05079 PTKc_Jak1_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Janus kinase 1. Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers a
Probab=99.77 E-value=9.2e-19 Score=163.10 Aligned_cols=112 Identities=25% Similarity=0.282 Sum_probs=91.6
Q ss_pred eeccCCCCCcceeEEEEEEE----eecCcEEEEEEcCCCC-hhHHHHHHHHHHH--------------------------
Q psy6828 46 SLSSNPDSDFRYSAIFTPIG----IYKGRIFAIKRIPKKS-VDITRAMKKELKI-------------------------- 94 (392)
Q Consensus 46 ~~~~~~lg~G~~g~V~~~~~----~~~~~~vAiK~~~~~~-~~~~~~~~~E~~~-------------------------- 94 (392)
+...+.+|+|+||.||++.. ..+++.||+|.++... ....+.+.+|+.+
T Consensus 6 ~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~l 85 (284)
T cd05079 6 LKRIRDLGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLKKEIEILRNLYHENIVKYKGICTEDGGNGIKL 85 (284)
T ss_pred hhhceecCCCCceeEEEEEEccCCCCccceEEEEEcCccccHHHHHHHHHHHHHHHhCCCCCeeeeeeEEecCCCCceEE
Confidence 45567899999999999974 4568899999997553 3444567788766
Q ss_pred -----------HHhhcCCcCCCHHHHHHHHHHHHHHHHHHhcCCcccccCCCCCceEEcCCceEEEeccccchhc
Q psy6828 95 -----------DIMENEDVKLDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLVDSRWVVKLADFGLTEFK 158 (392)
Q Consensus 95 -----------~~l~~~~~~l~~~~~~~i~~qi~~~l~ylH~~~iiiHrDlKp~NIll~~~~~~kl~DFGla~~~ 158 (392)
+++......+++.++..++.|++.||.|||++++ +||||||+||+++.++.+||+|||+++..
T Consensus 86 v~e~~~g~~L~~~l~~~~~~~~~~~~~~i~~~i~~aL~~lH~~gi-~H~dlkp~Nil~~~~~~~~l~dfg~~~~~ 159 (284)
T cd05079 86 IMEFLPSGSLKEYLPRNKNKINLKQQLKYAVQICKGMDYLGSRQY-VHRDLAARNVLVESEHQVKIGDFGLTKAI 159 (284)
T ss_pred EEEccCCCCHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCe-eecccchheEEEcCCCCEEECCCcccccc
Confidence 2332222358899999999999999999999999 99999999999999999999999998754
No 164
>PTZ00267 NIMA-related protein kinase; Provisional
Probab=99.77 E-value=6.8e-19 Score=176.08 Aligned_cols=116 Identities=16% Similarity=0.178 Sum_probs=96.0
Q ss_pred ceeeeccCCCCCcceeEEEEEEEeec-CcEEEEEEcCCCChhHHHHHHHHHHH--------------------------H
Q psy6828 43 SQVSLSSNPDSDFRYSAIFTPIGIYK-GRIFAIKRIPKKSVDITRAMKKELKI--------------------------D 95 (392)
Q Consensus 43 ~~~~~~~~~lg~G~~g~V~~~~~~~~-~~~vAiK~~~~~~~~~~~~~~~E~~~--------------------------~ 95 (392)
...|...+.+|+|+||.||++.+..+ ++.||+|.+..........+.+|+.+ +
T Consensus 66 ~~~y~~~~~lg~G~~g~vy~a~~~~~~~~~vv~K~~~~~~~~~~~~~~~E~~~l~~l~Hpniv~~~~~~~~~~~~~lv~E 145 (478)
T PTZ00267 66 EHMYVLTTLVGRNPTTAAFVATRGSDPKEKVVAKFVMLNDERQAAYARSELHCLAACDHFGIVKHFDDFKSDDKLLLIME 145 (478)
T ss_pred ceeEEEEEEEEeCCCcEEEEEEEcCCCCeEEEEEEcccCCHHHHHHHHHHHHHHHhCCCCCEeEEEEEEEECCEEEEEEE
Confidence 34477788899999999999998877 78899998866555555667778776 2
Q ss_pred Hhhc------------CCcCCCHHHHHHHHHHHHHHHHHHhcCCcccccCCCCCceEEcCCceEEEeccccchhcc
Q psy6828 96 IMEN------------EDVKLDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLVDSRWVVKLADFGLTEFKR 159 (392)
Q Consensus 96 ~l~~------------~~~~l~~~~~~~i~~qi~~~l~ylH~~~iiiHrDlKp~NIll~~~~~~kl~DFGla~~~~ 159 (392)
|+.. ....+++.++..++.|++.||.|||++++ +||||||+|||++.++.+||+|||+++...
T Consensus 146 ~~~gg~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~i-vHrDlkp~NIll~~~~~~kL~DFgla~~~~ 220 (478)
T PTZ00267 146 YGSGGDLNKQIKQRLKEHLPFQEYEVGLLFYQIVLALDEVHSRKM-MHRDLKSANIFLMPTGIIKLGDFGFSKQYS 220 (478)
T ss_pred CCCCCCHHHHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHhCCE-EECCcCHHhEEECCCCcEEEEeCcCceecC
Confidence 2221 12258899999999999999999999999 999999999999999999999999997643
No 165
>KOG0671|consensus
Probab=99.77 E-value=1.1e-18 Score=160.01 Aligned_cols=134 Identities=19% Similarity=0.184 Sum_probs=106.7
Q ss_pred cceeeeccCCCCCcceeEEEEEEEeecCcEEEEEEcCCCChhHHHHHHHHHHH---------------------------
Q psy6828 42 TSQVSLSSNPDSDFRYSAIFTPIGIYKGRIFAIKRIPKKSVDITRAMKKELKI--------------------------- 94 (392)
Q Consensus 42 ~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~~~~~~~~~~E~~~--------------------------- 94 (392)
...+|.....+|+|+||+|..|.+..++..||||+++.-.. -.+...-|++.
T Consensus 87 l~~Ry~i~~~lGeGtFGkV~ec~D~~~~~~vAlKIik~V~k-YreAa~iEi~vLqki~~~DP~g~~rcv~m~~wFdyrgh 165 (415)
T KOG0671|consen 87 LTNRYEIVDLLGEGTFGKVVECWDRETKEHVALKIIKNVDK-YREAALIEIEVLQKINESDPNGKFRCVQMRDWFDYRGH 165 (415)
T ss_pred cccceehhhhhcCCcccceEEEeecCCCceehHHHHHHHHH-HhhHHHHHHHHHHHHHhcCCCCceEEEeeehhhhccCc
Confidence 47788889999999999999999999999999999964321 12333334443
Q ss_pred -------------HHhhc-CCcCCCHHHHHHHHHHHHHHHHHHhcCCcccccCCCCCceEEcCC----------------
Q psy6828 95 -------------DIMEN-EDVKLDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLVDSR---------------- 144 (392)
Q Consensus 95 -------------~~l~~-~~~~l~~~~~~~i~~qi~~~l~ylH~~~iiiHrDlKp~NIll~~~---------------- 144 (392)
+++.. +..+++...++.+.+|+++++.|||+.++ +|-||||+|||+.+.
T Consensus 166 iCivfellG~S~~dFlk~N~y~~fpi~~ir~m~~QL~~sv~fLh~~kl-~HTDLKPENILfvss~~~~~~~~k~~~~~~r 244 (415)
T KOG0671|consen 166 ICIVFELLGLSTFDFLKENNYIPFPIDHIRHMGYQLLESVAFLHDLKL-THTDLKPENILFVSSEYFKTYNPKKKVCFIR 244 (415)
T ss_pred eEEEEeccChhHHHHhccCCccccchHHHHHHHHHHHHHHHHHHhcce-eecCCChheEEEeccceEEEeccCCccceec
Confidence 55554 44469999999999999999999999999 999999999999422
Q ss_pred ----ceEEEeccccchhcccccc--------------------ccccccceeeeeee
Q psy6828 145 ----WVVKLADFGLTEFKRDAEY--------------------TGTDQHSFLQHTYH 177 (392)
Q Consensus 145 ----~~~kl~DFGla~~~~~~~~--------------------~~~d~~s~g~~~~~ 177 (392)
..+|++|||.|.+..+... ...|+||+||+++|
T Consensus 245 ~~ks~~I~vIDFGsAtf~~e~hs~iVsTRHYRAPEViLgLGwS~pCDvWSiGCIL~E 301 (415)
T KOG0671|consen 245 PLKSTAIKVIDFGSATFDHEHHSTIVSTRHYRAPEVILGLGWSQPCDVWSIGCILVE 301 (415)
T ss_pred cCCCcceEEEecCCcceeccCcceeeeccccCCchheeccCcCCccCceeeeeEEEE
Confidence 2389999999987654332 23499999999999
No 166
>cd06607 STKc_TAO Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids proteins. Serine/threonine kinases (STKs), thousand-and-one amino acids (TAO) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. They activate the MAPKs, p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activating the respective MAP/ERK kinases (MEKs, also known as MKKs or MAPKKs), MEK3/MEK6 and MKK4/MKK7. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Vertebrates contain three TAO subfamily
Probab=99.77 E-value=4.7e-18 Score=160.26 Aligned_cols=135 Identities=22% Similarity=0.294 Sum_probs=108.2
Q ss_pred cceeeeccCCCCCcceeEEEEEEEeecCcEEEEEEcCCCCh---hHHHHHHHHHHH------------------------
Q psy6828 42 TSQVSLSSNPDSDFRYSAIFTPIGIYKGRIFAIKRIPKKSV---DITRAMKKELKI------------------------ 94 (392)
Q Consensus 42 ~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~~---~~~~~~~~E~~~------------------------ 94 (392)
...+|...+.+|+|+||.||++.+..+++.||+|.+..... ...+.+.+|+.+
T Consensus 13 ~~~~y~~~~~lg~g~~g~vy~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~~~~~~~~~~~~~l 92 (307)
T cd06607 13 PEKLFTDLREIGHGSFGAVYFARDVRTNEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQQLRHPNTIEYKGCYLREHTAWL 92 (307)
T ss_pred cchhhhhheeecCCCCeEEEEEEEcCCCcEEEEEEEeccccCcHHHHHHHHHHHHHHHhCCCCCEEEEEEEEEeCCeEEE
Confidence 44556677889999999999999988999999999864432 334567777766
Q ss_pred --HH--------hhcCCcCCCHHHHHHHHHHHHHHHHHHhcCCcccccCCCCCceEEcCCceEEEeccccchhcccc---
Q psy6828 95 --DI--------MENEDVKLDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLVDSRWVVKLADFGLTEFKRDA--- 161 (392)
Q Consensus 95 --~~--------l~~~~~~l~~~~~~~i~~qi~~~l~ylH~~~iiiHrDlKp~NIll~~~~~~kl~DFGla~~~~~~--- 161 (392)
++ +......+++..+..++.|++.||.|||+.++ +||||+|+||+++.++.+||+|||++......
T Consensus 93 v~e~~~g~l~~~~~~~~~~l~~~~~~~~~~ql~~~L~~LH~~~i-~H~dl~p~nIl~~~~~~~kL~dfg~~~~~~~~~~~ 171 (307)
T cd06607 93 VMEYCLGSASDILEVHKKPLQEVEIAAICHGALQGLAYLHSHER-IHRDIKAGNILLTEPGTVKLADFGSASLVSPANSF 171 (307)
T ss_pred EHHhhCCCHHHHHHHcccCCCHHHHHHHHHHHHHHHHHHHHCCc-eecCCCcccEEECCCCCEEEeecCcceecCCCCCc
Confidence 22 22233368999999999999999999999999 99999999999999999999999988643211
Q ss_pred -------------------ccccccccceeeeeee
Q psy6828 162 -------------------EYTGTDQHSFLQHTYH 177 (392)
Q Consensus 162 -------------------~~~~~d~~s~g~~~~~ 177 (392)
.....|+||||+++|+
T Consensus 172 ~~~~~y~aPE~~~~~~~~~~~~~sDv~s~G~il~e 206 (307)
T cd06607 172 VGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIE 206 (307)
T ss_pred cCCccccCceeeeccCCCCCCcccchHHHHHHHHH
Confidence 1124599999999999
No 167
>cd07839 STKc_CDK5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 5. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 5 (CDK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK5 is unusual in that it is regulated by non-cyclin proteins, p35 and p39. It is highly expressed in the nervous system and is critical in normal neural development and function. It plays a role in neuronal migration and differentiation, and is also
Probab=99.77 E-value=4.3e-19 Score=165.10 Aligned_cols=111 Identities=22% Similarity=0.362 Sum_probs=89.9
Q ss_pred eccCCCCCcceeEEEEEEEeecCcEEEEEEcCCCCh--hHHHHHHHHHHH------------------------------
Q psy6828 47 LSSNPDSDFRYSAIFTPIGIYKGRIFAIKRIPKKSV--DITRAMKKELKI------------------------------ 94 (392)
Q Consensus 47 ~~~~~lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~~--~~~~~~~~E~~~------------------------------ 94 (392)
...+.||+|+||.||++.+..+|+.||+|.++.... .....+.+|+.+
T Consensus 3 ~~~~~l~~g~~~~vy~~~~~~~g~~~~~k~~~~~~~~~~~~~~~~~ei~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~ 82 (284)
T cd07839 3 EKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLYDVLHSDKKLTLVFEYCD 82 (284)
T ss_pred eeEEEecccCCeEEEEEEECCCCcEEEEEEeecccccccCccchhHHHHHHHhcCCCCeeeHHHHhccCCceEEEEecCC
Confidence 345679999999999999999999999999865322 112334445544
Q ss_pred ----HHhhcCCcCCCHHHHHHHHHHHHHHHHHHhcCCcccccCCCCCceEEcCCceEEEeccccchhc
Q psy6828 95 ----DIMENEDVKLDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLVDSRWVVKLADFGLTEFK 158 (392)
Q Consensus 95 ----~~l~~~~~~l~~~~~~~i~~qi~~~l~ylH~~~iiiHrDlKp~NIll~~~~~~kl~DFGla~~~ 158 (392)
+++......+++..+..++.||+.||.|||++++ +||||||+||+++.++.+||+|||+++..
T Consensus 83 ~~l~~~~~~~~~~~~~~~~~~~~~qi~~al~~LH~~~i-~H~dl~~~nil~~~~~~~~l~dfg~~~~~ 149 (284)
T cd07839 83 QDLKKYFDSCNGDIDPEIVKSFMFQLLKGLAFCHSHNV-LHRDLKPQNLLINKNGELKLADFGLARAF 149 (284)
T ss_pred CCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCE-ecCCCCHHHEEEcCCCcEEECccchhhcc
Confidence 2333334468999999999999999999999999 99999999999999999999999998754
No 168
>KOG0610|consensus
Probab=99.77 E-value=6.4e-19 Score=163.13 Aligned_cols=109 Identities=19% Similarity=0.184 Sum_probs=92.5
Q ss_pred eccCCCCCcceeEEEEEEEeecCcEEEEEEcCCCChh---HHHHHHHHHHH--------------------------HHh
Q psy6828 47 LSSNPDSDFRYSAIFTPIGIYKGRIFAIKRIPKKSVD---ITRAMKKELKI--------------------------DIM 97 (392)
Q Consensus 47 ~~~~~lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~~~---~~~~~~~E~~~--------------------------~~l 97 (392)
...+.||.|.-|+||++....++..+|+|++.+..+. ...+.+.|.+| +|.
T Consensus 80 ~llk~LG~GdiG~VyL~~l~~t~~~fAmKVmdK~~l~~rkKl~Ra~tE~eIL~~lDHPFlPTLYa~fet~~~~cl~meyC 159 (459)
T KOG0610|consen 80 RLLKRLGCGDIGTVYLVELRGTNCLFAMKVMDKESLASRKKLKRAQTEREILSLLDHPFLPTLYASFETDKYSCLVMEYC 159 (459)
T ss_pred HHHHHcCCCCceeEEEEEecCCCceEEEEEecHHHHhhhhHHHHHHHHHHHHHhcCCCccchhhheeeccceeEEEEecC
Confidence 3467899999999999999999999999999987763 33455556665 221
Q ss_pred ----------hcCCcCCCHHHHHHHHHHHHHHHHHHhcCCcccccCCCCCceEEcCCceEEEeccccch
Q psy6828 98 ----------ENEDVKLDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLVDSRWVVKLADFGLTE 156 (392)
Q Consensus 98 ----------~~~~~~l~~~~~~~i~~qi~~~l~ylH~~~iiiHrDlKp~NIll~~~~~~kl~DFGla~ 156 (392)
++.+..|++..++.|+.+++.||+|||-.|| |.|||||+|||+.++|++-|+||-|+.
T Consensus 160 pGGdL~~LrqkQp~~~fse~~aRFYaAEvl~ALEYLHmlGi-vYRDLKPENILvredGHIMLsDFDLS~ 227 (459)
T KOG0610|consen 160 PGGDLHSLRQKQPGKRFSESAARFYAAEVLLALEYLHMLGI-VYRDLKPENILVREDGHIMLSDFDLSL 227 (459)
T ss_pred CCccHHHHHhhCCCCccchhhHHHHHHHHHHHHHHHHhhce-eeccCCcceeEEecCCcEEeeeccccc
Confidence 1234479999999999999999999999999 999999999999999999999999875
No 169
>cd05064 PTKc_EphR_A10 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A10. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA10 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchor
Probab=99.77 E-value=8.7e-19 Score=161.74 Aligned_cols=111 Identities=17% Similarity=0.167 Sum_probs=90.8
Q ss_pred eeccCCCCCcceeEEEEEEEe---ecCcEEEEEEcCCCCh-hHHHHHHHHHHH---------------------------
Q psy6828 46 SLSSNPDSDFRYSAIFTPIGI---YKGRIFAIKRIPKKSV-DITRAMKKELKI--------------------------- 94 (392)
Q Consensus 46 ~~~~~~lg~G~~g~V~~~~~~---~~~~~vAiK~~~~~~~-~~~~~~~~E~~~--------------------------- 94 (392)
+...+.||+|+||.||++... ..+..||+|.++.... .....+.+|+..
T Consensus 7 ~~~~~~ig~G~fg~V~~~~~~~~~~~~~~vaik~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e 86 (266)
T cd05064 7 IKIERILGTGRFGELCRGCLKLPSKRELPVAIHTLRAGCSDKQRRGFLAEALTLGQFDHSNIVRLEGVITRGNTMMIVTE 86 (266)
T ss_pred eEEeeeecccCCCeEEEEEEecCCCceeeEEEEecCCCCCHHHHHHHHHHHHHHhcCCCCCcCeEEEEEecCCCcEEEEE
Confidence 344667999999999999865 3456899999976532 334556777776
Q ss_pred --------HHhhcCCcCCCHHHHHHHHHHHHHHHHHHhcCCcccccCCCCCceEEcCCceEEEeccccchh
Q psy6828 95 --------DIMENEDVKLDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLVDSRWVVKLADFGLTEF 157 (392)
Q Consensus 95 --------~~l~~~~~~l~~~~~~~i~~qi~~~l~ylH~~~iiiHrDlKp~NIll~~~~~~kl~DFGla~~ 157 (392)
+++......+++.++..++.|++.||.|||++++ +||||||+||+++.++.+|++|||.+..
T Consensus 87 ~~~~~~L~~~l~~~~~~l~~~~~~~~~~~i~~al~~lH~~~i-iH~dikp~nili~~~~~~~l~dfg~~~~ 156 (266)
T cd05064 87 YMSNGALDSFLRKHEGQLVAGQLMGMLPGLASGMKYLSEMGY-VHKGLAAHKVLVNSDLVCKISGFRRLQE 156 (266)
T ss_pred eCCCCcHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHCCE-eeccccHhhEEEcCCCcEEECCCccccc
Confidence 3444444468999999999999999999999999 9999999999999999999999998654
No 170
>cd07870 STKc_PFTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-2 kinase. Serine/Threonine Kinases (STKs), PFTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-2 is also referred to as ALS2CR7 (amyotrophic lateral sclerosis 2 (juvenile) chromosome region candidate 7). It may be associated with amyotrophic lateral sclerosis 2 (ALS2), an autosomal recess
Probab=99.77 E-value=8.2e-19 Score=163.95 Aligned_cols=113 Identities=25% Similarity=0.378 Sum_probs=90.5
Q ss_pred eeeeccCCCCCcceeEEEEEEEeecCcEEEEEEcCCCCh-hHHHHHHHHHHH----------------------------
Q psy6828 44 QVSLSSNPDSDFRYSAIFTPIGIYKGRIFAIKRIPKKSV-DITRAMKKELKI---------------------------- 94 (392)
Q Consensus 44 ~~~~~~~~lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~~-~~~~~~~~E~~~---------------------------- 94 (392)
..|...+.||+|+||.||+|.+..+++.||+|.+..... .....+.+|+.+
T Consensus 5 ~~y~~~~~ig~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~lv~e~ 84 (291)
T cd07870 5 TSYLNLEKLGEGSYATVYKGISRINGQLVALKVISMKTEEGVPFTAIREASLLKGLKHANIVLLHDIIHTKETLTFVFEY 84 (291)
T ss_pred ceeEEEEEEEecCCEEEEEEEEcCCCcEEEEEEecccCcCCCcHHHHHHHHHHHhcCCCCEeEEEEEEecCCeEEEEEec
Confidence 345667789999999999999999999999999865432 212234555544
Q ss_pred ------HHhhcCCcCCCHHHHHHHHHHHHHHHHHHhcCCcccccCCCCCceEEcCCceEEEeccccchh
Q psy6828 95 ------DIMENEDVKLDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLVDSRWVVKLADFGLTEF 157 (392)
Q Consensus 95 ------~~l~~~~~~l~~~~~~~i~~qi~~~l~ylH~~~iiiHrDlKp~NIll~~~~~~kl~DFGla~~ 157 (392)
+++......+++.++..++.|++.||.|||++++ +||||||+||+++.++.+||+|||+++.
T Consensus 85 ~~~~l~~~~~~~~~~~~~~~~~~~~~qi~~~L~~lH~~~i-~H~dlkp~Nil~~~~~~~~l~Dfg~~~~ 152 (291)
T cd07870 85 MHTDLAQYMIQHPGGLHPYNVRLFMFQLLRGLAYIHGQHI-LHRDLKPQNLLISYLGELKLADFGLARA 152 (291)
T ss_pred ccCCHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhCCc-ccCCCChHHEEEcCCCcEEEeccccccc
Confidence 2222222357888899999999999999999999 9999999999999999999999998864
No 171
>PHA02988 hypothetical protein; Provisional
Probab=99.77 E-value=3.2e-18 Score=159.60 Aligned_cols=124 Identities=15% Similarity=0.149 Sum_probs=98.4
Q ss_pred CCCCCcceeEEEEEEEeecCcEEEEEEcCCCChh---HHHHHHHHHHH--------------------------------
Q psy6828 50 NPDSDFRYSAIFTPIGIYKGRIFAIKRIPKKSVD---ITRAMKKELKI-------------------------------- 94 (392)
Q Consensus 50 ~~lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~~~---~~~~~~~E~~~-------------------------------- 94 (392)
..+|+|+++.||+|.. +|+.||||.+++.... ..+.+.+|+.+
T Consensus 26 ~~i~~g~~~~v~~~~~--~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~~~g~~~~~~~~~~~~~lv~Ey 103 (283)
T PHA02988 26 VLIKENDQNSIYKGIF--NNKEVIIRTFKKFHKGHKVLIDITENEIKNLRRIDSNNILKIYGFIIDIVDDLPRLSLILEY 103 (283)
T ss_pred eEEeeCCceEEEEEEE--CCEEEEEEeccccccccHHHHHHHHHHHHHHHhcCCCCEEEEeeeEEecccCCCceEEEEEe
Confidence 4589999999999974 7999999999765432 24667788877
Q ss_pred -------HHhhcCCcCCCHHHHHHHHHHHHHHHHHHhcC-CcccccCCCCCceEEcCCceEEEeccccchhcccc-----
Q psy6828 95 -------DIMENEDVKLDNMFIASLVADILRGMLYLHDS-ALRYHGNLKASNCLVDSRWVVKLADFGLTEFKRDA----- 161 (392)
Q Consensus 95 -------~~l~~~~~~l~~~~~~~i~~qi~~~l~ylH~~-~iiiHrDlKp~NIll~~~~~~kl~DFGla~~~~~~----- 161 (392)
+++.. ...+++.....++.|++.||.|||+. ++ +||||||+|||++.++.+||+|||+++.....
T Consensus 104 ~~~g~L~~~l~~-~~~~~~~~~~~i~~~i~~~l~~lH~~~~~-~Hrdlkp~nill~~~~~~kl~dfg~~~~~~~~~~~~~ 181 (283)
T PHA02988 104 CTRGYLREVLDK-EKDLSFKTKLDMAIDCCKGLYNLYKYTNK-PYKNLTSVSFLVTENYKLKIICHGLEKILSSPPFKNV 181 (283)
T ss_pred CCCCcHHHHHhh-CCCCChhHHHHHHHHHHHHHHHHHhcCCC-CCCcCChhhEEECCCCcEEEcccchHhhhcccccccc
Confidence 22222 12588889999999999999999984 78 89999999999999999999999998752211
Q ss_pred -----------------ccccccccceeeeeee
Q psy6828 162 -----------------EYTGTDQHSFLQHTYH 177 (392)
Q Consensus 162 -----------------~~~~~d~~s~g~~~~~ 177 (392)
.....|+||||+++|+
T Consensus 182 ~~~~y~aPE~~~~~~~~~~~k~Di~SlGvil~e 214 (283)
T PHA02988 182 NFMVYFSYKMLNDIFSEYTIKDDIYSLGVVLWE 214 (283)
T ss_pred CcccccCHHHhhhccccccchhhhhHHHHHHHH
Confidence 1123499999999998
No 172
>cd05106 PTKc_CSF-1R Catalytic domain of the Protein Tyrosine Kinase, Colony-Stimulating Factor-1 Receptor. Protein Tyrosine Kinase (PTK) family; Colony-Stimulating Factor-1 Receptor (CSF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CSF-1R, also called c-Fms, is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of CSF-1R to its ligand, CSF-1, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. CSF-1R signaling is criti
Probab=99.77 E-value=2e-18 Score=167.50 Aligned_cols=55 Identities=27% Similarity=0.387 Sum_probs=51.4
Q ss_pred CCCHHHHHHHHHHHHHHHHHHhcCCcccccCCCCCceEEcCCceEEEeccccchhc
Q psy6828 103 KLDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLVDSRWVVKLADFGLTEFK 158 (392)
Q Consensus 103 ~l~~~~~~~i~~qi~~~l~ylH~~~iiiHrDlKp~NIll~~~~~~kl~DFGla~~~ 158 (392)
.+++.++..++.|++.||.|||++++ +||||||+|||+++++.+||+|||+++..
T Consensus 208 ~l~~~~~~~i~~qi~~aL~yLH~~gi-iHrDLkp~Nil~~~~~~~kL~DfGla~~~ 262 (374)
T cd05106 208 PLDLDDLLRFSSQVAQGMDFLASKNC-IHRDVAARNVLLTDGRVAKICDFGLARDI 262 (374)
T ss_pred CcCHHHHHHHHHHHHHHHHHHHHCCE-EeccCchheEEEeCCCeEEEeeceeeeec
Confidence 36788899999999999999999999 99999999999999999999999998754
No 173
>cd06643 STKc_SLK Catalytic domain of the Protein Serine/Threonine Kinase, Ste20-like kinase. Serine/threonine kinases (STKs), Ste20-like kinase (SLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It acts as a MAPK kinase kinase (MAPKKK) by phosphorylating ASK1, resulting in the phosphorylation of p38. SLK also plays a role in mediating actin reorganization. It is part of a microtubule-associated complex that is targeted at adhesion sites, and is required in focal adhesion turnover and in regulating cell migration.
Probab=99.77 E-value=1.9e-18 Score=160.76 Aligned_cols=110 Identities=25% Similarity=0.308 Sum_probs=94.4
Q ss_pred ccCCCCCcceeEEEEEEEeecCcEEEEEEcCCCChhHHHHHHHHHHH---------------------------------
Q psy6828 48 SSNPDSDFRYSAIFTPIGIYKGRIFAIKRIPKKSVDITRAMKKELKI--------------------------------- 94 (392)
Q Consensus 48 ~~~~lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~~~~~~~~~~E~~~--------------------------------- 94 (392)
..+.||+|+||.||++.+..++..+++|.+........+.+.+|+.+
T Consensus 9 i~~~lg~g~~g~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~h~~ii~~~~~~~~~~~~~~v~e~~~~~~ 88 (282)
T cd06643 9 IIGELGDGAFGKVYKAQNKETGVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLDAFYYENNLWILIEFCAGGA 88 (282)
T ss_pred HHhhcccCCCeEEEEEEECCCCeEEEEEEeCCCCHHHHHHHHHHHHHHHHCCCCCeeeEEEEEeeCCEEEEEEEecCCCc
Confidence 35679999999999999999999999999987666666677778766
Q ss_pred --HHhhcCCcCCCHHHHHHHHHHHHHHHHHHhcCCcccccCCCCCceEEcCCceEEEeccccchhc
Q psy6828 95 --DIMENEDVKLDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLVDSRWVVKLADFGLTEFK 158 (392)
Q Consensus 95 --~~l~~~~~~l~~~~~~~i~~qi~~~l~ylH~~~iiiHrDlKp~NIll~~~~~~kl~DFGla~~~ 158 (392)
.++.+....+++..+..++.|++.||.|||+.++ +||||||+||+++.++.+|++|||++...
T Consensus 89 l~~~~~~~~~~l~~~~~~~~~~qi~~~L~~LH~~~i-~H~dlkp~nili~~~~~~kl~dfg~~~~~ 153 (282)
T cd06643 89 VDAVMLELERPLTEPQIRVVCKQTLEALNYLHENKI-IHRDLKAGNILFTLDGDIKLADFGVSAKN 153 (282)
T ss_pred HHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCe-eecCCCcccEEEccCCCEEEccccccccc
Confidence 2333333468999999999999999999999999 99999999999999999999999998654
No 174
>cd05633 STKc_GRK3 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 3. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK3 (also known as beta-adrenergic receptor kinase 2) is wi
Probab=99.77 E-value=1.5e-18 Score=161.49 Aligned_cols=105 Identities=17% Similarity=0.216 Sum_probs=83.6
Q ss_pred CCCCcceeEEEEEEEeecCcEEEEEEcCCCChh---HHHHHHHHHHH---------------------------------
Q psy6828 51 PDSDFRYSAIFTPIGIYKGRIFAIKRIPKKSVD---ITRAMKKELKI--------------------------------- 94 (392)
Q Consensus 51 ~lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~~~---~~~~~~~E~~~--------------------------------- 94 (392)
.||+|+||.||++.+..+++.||+|.+.+.... ......+|...
T Consensus 1 ~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~~ 80 (279)
T cd05633 1 IIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMTYAFHTPDKLCFILDLMN 80 (279)
T ss_pred CcccCCCeEEEEEEECCCCcEEEEEEEEccccccchHHHHHHHHHHHHHHHhhCCCCcEeEEEEEEecCCeEEEEEecCC
Confidence 379999999999999999999999998754321 11122233221
Q ss_pred -----HHhhcCCcCCCHHHHHHHHHHHHHHHHHHhcCCcccccCCCCCceEEcCCceEEEeccccchh
Q psy6828 95 -----DIMENEDVKLDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLVDSRWVVKLADFGLTEF 157 (392)
Q Consensus 95 -----~~l~~~~~~l~~~~~~~i~~qi~~~l~ylH~~~iiiHrDlKp~NIll~~~~~~kl~DFGla~~ 157 (392)
+++.. ...+++..+..++.|++.||.|||++++ +||||||+|||+++++.++++|||++..
T Consensus 81 ~~~L~~~i~~-~~~l~~~~~~~i~~qi~~al~~lH~~~i-vH~dikp~Nil~~~~~~~~l~dfg~~~~ 146 (279)
T cd05633 81 GGDLHYHLSQ-HGVFSEKEMRFYATEIILGLEHMHNRFV-VYRDLKPANILLDEHGHVRISDLGLACD 146 (279)
T ss_pred CCCHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHHCCc-CCCCCCHHHEEECCCCCEEEccCCccee
Confidence 22222 2258999999999999999999999999 9999999999999999999999999864
No 175
>cd06646 STKc_MAP4K5 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 5. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 5 (MAPKKKK5 or MAP4K5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated
Probab=99.77 E-value=1.1e-18 Score=160.93 Aligned_cols=111 Identities=25% Similarity=0.340 Sum_probs=93.1
Q ss_pred eeccCCCCCcceeEEEEEEEeecCcEEEEEEcCCCChhHHHHHHHHHHH-------------------------------
Q psy6828 46 SLSSNPDSDFRYSAIFTPIGIYKGRIFAIKRIPKKSVDITRAMKKELKI------------------------------- 94 (392)
Q Consensus 46 ~~~~~~lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~~~~~~~~~~E~~~------------------------------- 94 (392)
|...+.+|+|+||.||++.+..+++.||+|.+........+.+.+|+.+
T Consensus 11 y~~~~~lg~g~~g~vy~~~~~~~~~~~aik~~~~~~~~~~~~~~~e~~~l~~~~h~~ii~~~~~~~~~~~~~iv~e~~~~ 90 (267)
T cd06646 11 YELIQRVGSGTYGDVYKARNLHTGELAAVKIIKLEPGDDFSLIQQEIFMVKECKHCNIVAYFGSYLSREKLWICMEYCGG 90 (267)
T ss_pred cchhheeecCCCeEEEEEEECCCCeEEEEEEEecCccchHHHHHHHHHHHHhcCCCCeeeeeEEEEeCCEEEEEEeCCCC
Confidence 4557789999999999999999999999999976544444556667665
Q ss_pred ----HHhhcCCcCCCHHHHHHHHHHHHHHHHHHhcCCcccccCCCCCceEEcCCceEEEeccccchhc
Q psy6828 95 ----DIMENEDVKLDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLVDSRWVVKLADFGLTEFK 158 (392)
Q Consensus 95 ----~~l~~~~~~l~~~~~~~i~~qi~~~l~ylH~~~iiiHrDlKp~NIll~~~~~~kl~DFGla~~~ 158 (392)
+++... ..+++..+..++.|++.||.|||+.++ +||||||+||+++.++.+||+|||++...
T Consensus 91 ~~L~~~~~~~-~~~~~~~~~~~~~qi~~~l~~lH~~~i-~H~dl~p~nill~~~~~~~l~dfg~~~~~ 156 (267)
T cd06646 91 GSLQDIYHVT-GPLSELQIAYVCRETLQGLAYLHSKGK-MHRDIKGANILLTDNGDVKLADFGVAAKI 156 (267)
T ss_pred CcHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHCCc-cccCCCHHHEEECCCCCEEECcCccceee
Confidence 223222 258999999999999999999999999 99999999999999999999999998754
No 176
>cd06644 STKc_STK10_LOK Catalytic domain of the Protein Serine/Threonine Kinase, STK10 or Lymphocyte-oriented kinase. Serine/threonine kinases (STKs), STK10 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Other names for STK10 include lymphocyte-oriented kinase (LOK) and Xenopus polo-like kinase kinase 1 (xPlkk1). STK10 is highly expressed in lymphocytes and is responsible in regulating leukocyte function associated antigen (LFA-1)-mediated lymphocyte adhesion. It plays a role in regulating the CD28 responsive element in T cells, and may also function as a regulator of polo-like kinase 1 (Plk1), a protein which is overexpressed in multiple tumor types.
Probab=99.77 E-value=1.4e-18 Score=162.44 Aligned_cols=114 Identities=27% Similarity=0.319 Sum_probs=97.3
Q ss_pred ceeeeccCCCCCcceeEEEEEEEeecCcEEEEEEcCCCChhHHHHHHHHHHH----------------------------
Q psy6828 43 SQVSLSSNPDSDFRYSAIFTPIGIYKGRIFAIKRIPKKSVDITRAMKKELKI---------------------------- 94 (392)
Q Consensus 43 ~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~~~~~~~~~~E~~~---------------------------- 94 (392)
.+.|...+.+|+|+||.||++.+..+++.|++|.+........+.+.+|+.+
T Consensus 11 ~~~y~i~~~lg~g~~g~vy~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~ 90 (292)
T cd06644 11 NEVWEIIGELGDGAFGKVYKAKNKETGALAAAKVIETKSEEELEDYMVEIEILATCNHPYIVKLLGAFYWDGKLWIMIEF 90 (292)
T ss_pred chhhhhhheecCCCCeEEEEEEECCCCceEEEEEeccCCHHHHHHHHHHHHHHHhCCCCcEeeeEEEEEeCCeEEEEEec
Confidence 4456667789999999999999999999999999987766666777778765
Q ss_pred -------HHhhcCCcCCCHHHHHHHHHHHHHHHHHHhcCCcccccCCCCCceEEcCCceEEEeccccchh
Q psy6828 95 -------DIMENEDVKLDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLVDSRWVVKLADFGLTEF 157 (392)
Q Consensus 95 -------~~l~~~~~~l~~~~~~~i~~qi~~~l~ylH~~~iiiHrDlKp~NIll~~~~~~kl~DFGla~~ 157 (392)
.++.+....+++..+..++.|++.+|.|||+.++ +||||||+||+++.++.+||+|||++..
T Consensus 91 ~~~~~l~~~~~~~~~~l~~~~~~~~~~ql~~~l~~lH~~~i-~H~dlkp~Nili~~~~~~kl~dfg~~~~ 159 (292)
T cd06644 91 CPGGAVDAIMLELDRGLTEPQIQVICRQMLEALQYLHSMKI-IHRDLKAGNVLLTLDGDIKLADFGVSAK 159 (292)
T ss_pred CCCCcHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHhcCCe-eecCCCcceEEEcCCCCEEEccCcccee
Confidence 2222333468999999999999999999999999 9999999999999999999999998764
No 177
>cd05060 PTKc_Syk_like Catalytic domain of Spleen Tyrosine Kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Spleen Tyrosine Kinase (Syk) subfamily; catalytic (c) domain. The Syk subfamily is composed of Syk, ZAP-70, Shark, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. They are involved in the signaling downstream of activated receptors (including B-cell, T-cell, and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferation, differentiation, survival, adhesion, mi
Probab=99.76 E-value=4.2e-18 Score=156.16 Aligned_cols=107 Identities=18% Similarity=0.318 Sum_probs=89.1
Q ss_pred CCCCCcceeEEEEEEEeecC---cEEEEEEcCCCCh-hHHHHHHHHHHH-------------------------------
Q psy6828 50 NPDSDFRYSAIFTPIGIYKG---RIFAIKRIPKKSV-DITRAMKKELKI------------------------------- 94 (392)
Q Consensus 50 ~~lg~G~~g~V~~~~~~~~~---~~vAiK~~~~~~~-~~~~~~~~E~~~------------------------------- 94 (392)
+.||+|+||.||+|....++ ..||+|.+..... ...+.+.+|+.+
T Consensus 1 ~~ig~G~~g~v~~~~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~v~e~~~~~ 80 (257)
T cd05060 1 KELGHGNFGSVVKGVYLMKSGKEVEVAVKTLKQEHIAAGKKEFLREASVMAQLDHPCIVRLIGVCKGEPLMLVMELAPLG 80 (257)
T ss_pred CccCccCceeEEEeEeeccCCCcceEEEEecccccchHHHHHHHHHHHHHHhcCCCCeeeEEEEEcCCceEEEEEeCCCC
Confidence 36899999999999876555 7899999986654 344567777766
Q ss_pred ---HHhhcCCcCCCHHHHHHHHHHHHHHHHHHhcCCcccccCCCCCceEEcCCceEEEeccccchhc
Q psy6828 95 ---DIMENEDVKLDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLVDSRWVVKLADFGLTEFK 158 (392)
Q Consensus 95 ---~~l~~~~~~l~~~~~~~i~~qi~~~l~ylH~~~iiiHrDlKp~NIll~~~~~~kl~DFGla~~~ 158 (392)
+++.... .+++..+..++.|++.||.|||++++ +||||||+||+++.++.+||+|||+++..
T Consensus 81 ~L~~~l~~~~-~~~~~~~~~~~~qi~~~l~~lh~~~i-~H~di~p~nili~~~~~~kl~df~~~~~~ 145 (257)
T cd05060 81 PLLKYLKKRR-EIPVSDLKELAHQVAMGMAYLESKHF-VHRDLAARNVLLVNRHQAKISDFGMSRAL 145 (257)
T ss_pred cHHHHHHhCC-CCCHHHHHHHHHHHHHHHHHHhhcCe-eccCcccceEEEcCCCcEEecccccccee
Confidence 3333332 58999999999999999999999999 99999999999999999999999998754
No 178
>cd06650 PKc_MEK1 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 1. Protein kinases (PKs), MAP/ERK kinase (MEK) 1 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 is a dual-specificity PK that phosphorylates and activates the downst
Probab=99.76 E-value=1.2e-18 Score=166.24 Aligned_cols=131 Identities=21% Similarity=0.275 Sum_probs=103.7
Q ss_pred eeeccCCCCCcceeEEEEEEEeecCcEEEEEEcCCCCh-hHHHHHHHHHHH-----------------------------
Q psy6828 45 VSLSSNPDSDFRYSAIFTPIGIYKGRIFAIKRIPKKSV-DITRAMKKELKI----------------------------- 94 (392)
Q Consensus 45 ~~~~~~~lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~~-~~~~~~~~E~~~----------------------------- 94 (392)
.|...+.||+|+||.||++.+..+++.+|+|.+..... ...+.+.+|+.+
T Consensus 6 ~y~~~~~lg~g~~g~V~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~ 85 (333)
T cd06650 6 DFEKISELGAGNGGVVFKVSHKPSGLIMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISICMEHM 85 (333)
T ss_pred hhheeccccCCCCEEEEEEEECCCCcEEEEEEeecccCHHHHHHHHHHHHHHHHCCCCcccceeEEEEECCEEEEEEecC
Confidence 35556789999999999999999999999999876432 344567788776
Q ss_pred ------HHhhcCCcCCCHHHHHHHHHHHHHHHHHHhcC-CcccccCCCCCceEEcCCceEEEeccccchhccccc-----
Q psy6828 95 ------DIMENEDVKLDNMFIASLVADILRGMLYLHDS-ALRYHGNLKASNCLVDSRWVVKLADFGLTEFKRDAE----- 162 (392)
Q Consensus 95 ------~~l~~~~~~l~~~~~~~i~~qi~~~l~ylH~~-~iiiHrDlKp~NIll~~~~~~kl~DFGla~~~~~~~----- 162 (392)
+++.+. ..+++..+..++.|++.||.|||++ ++ +||||||+|||++.++.+||+|||++.......
T Consensus 86 ~~~~L~~~l~~~-~~~~~~~~~~~~~~l~~~l~~lH~~~~i-vH~dlkp~Nili~~~~~~kL~Dfg~~~~~~~~~~~~~~ 163 (333)
T cd06650 86 DGGSLDQVLKKA-GRIPEQILGKVSIAVIKGLTYLREKHKI-MHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANSFV 163 (333)
T ss_pred CCCcHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHhcCCE-EecCCChhhEEEcCCCCEEEeeCCcchhhhhhccccCC
Confidence 333332 2588899999999999999999975 67 999999999999999999999999987542211
Q ss_pred ----------------cccccccceeeeeee
Q psy6828 163 ----------------YTGTDQHSFLQHTYH 177 (392)
Q Consensus 163 ----------------~~~~d~~s~g~~~~~ 177 (392)
....|+||+|+++|+
T Consensus 164 ~~~~y~aPE~~~~~~~~~~~DvwslG~il~~ 194 (333)
T cd06650 164 GTRSYMSPERLQGTHYSVQSDIWSMGLSLVE 194 (333)
T ss_pred CCccccCHHHhcCCCCCcHHHHHHHHHHHHH
Confidence 112388888888887
No 179
>cd06619 PKc_MKK5 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 5. Protein kinases (PKs), MAP kinase kinase 5 (MKK5) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK5, also referred to as MEK5, is a dual-specificity PK that p
Probab=99.76 E-value=1.1e-18 Score=162.26 Aligned_cols=109 Identities=26% Similarity=0.459 Sum_probs=91.1
Q ss_pred cCCCCCcceeEEEEEEEeecCcEEEEEEcCCCC-hhHHHHHHHHHHH--------------------------HHhhcCC
Q psy6828 49 SNPDSDFRYSAIFTPIGIYKGRIFAIKRIPKKS-VDITRAMKKELKI--------------------------DIMENED 101 (392)
Q Consensus 49 ~~~lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~-~~~~~~~~~E~~~--------------------------~~l~~~~ 101 (392)
...||+|+||.||++.+..+++.||+|.+.... ....+.+.+|+.+ +++..+.
T Consensus 6 ~~~lg~g~~~~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~ 85 (279)
T cd06619 6 QEILGHGNGGTVYKAYHLLTRRILAVKVIPLDITVELQKQIMSELEILYKCDSPYIIGFYGAFFVENRISICTEFMDGGS 85 (279)
T ss_pred eeeeccCCCeEEEEEEEcCCCcEEEEEEEecCCChHHHHHHHHHHHHHHhCCCCCeeeEEEEEEECCEEEEEEecCCCCC
Confidence 456999999999999999999999999986542 2344567778776 3333322
Q ss_pred ----cCCCHHHHHHHHHHHHHHHHHHhcCCcccccCCCCCceEEcCCceEEEeccccchhc
Q psy6828 102 ----VKLDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLVDSRWVVKLADFGLTEFK 158 (392)
Q Consensus 102 ----~~l~~~~~~~i~~qi~~~l~ylH~~~iiiHrDlKp~NIll~~~~~~kl~DFGla~~~ 158 (392)
..+++..+..++.|++.||.|||+.++ +|+||||+||+++.++.+||+|||++...
T Consensus 86 l~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i-~H~dlkp~Nill~~~~~~~l~dfg~~~~~ 145 (279)
T cd06619 86 LDVYRKIPEHVLGRIAVAVVKGLTYLWSLKI-LHRDVKPSNMLVNTRGQVKLCDFGVSTQL 145 (279)
T ss_pred hHHhhcCCHHHHHHHHHHHHHHHHHHHHCCE-eeCCCCHHHEEECCCCCEEEeeCCcceec
Confidence 147888999999999999999999999 99999999999999999999999998754
No 180
>cd07844 STKc_PCTAIRE_like Catalytic domain of PCTAIRE-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), PCTAIRE-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily share sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. The association of PCTAIRE-like proteins with cyclins has not been widely studied, although PFTAIRE-1 has been shown to function as a CDK which is regulated by cyclin D3 as well as the
Probab=99.76 E-value=1e-18 Score=163.22 Aligned_cols=112 Identities=24% Similarity=0.357 Sum_probs=90.6
Q ss_pred eeccCCCCCcceeEEEEEEEeecCcEEEEEEcCCCCh-hHHHHHHHHHHH------------------------------
Q psy6828 46 SLSSNPDSDFRYSAIFTPIGIYKGRIFAIKRIPKKSV-DITRAMKKELKI------------------------------ 94 (392)
Q Consensus 46 ~~~~~~lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~~-~~~~~~~~E~~~------------------------------ 94 (392)
|...+.+|+|+||.||++.+..+++.||||.+..... .....+.+|+.+
T Consensus 7 y~~~~~lg~g~~~~vy~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~ 86 (291)
T cd07844 7 YKKLDKLGEGSYATVYKGRSKLTGQLVALKEIRLEHEEGAPFTAIREASLLKDLKHANIVTLHDIIHTKKTLTLVFEYLD 86 (291)
T ss_pred eeEEEEEeecCCeEEEEEEEcCCCcEEEEEEEecccccCCchhHHHHHHHHhhCCCcceeeEEEEEecCCeEEEEEecCC
Confidence 4455679999999999999988999999999865432 112334566665
Q ss_pred ----HHhhcCCcCCCHHHHHHHHHHHHHHHHHHhcCCcccccCCCCCceEEcCCceEEEeccccchhc
Q psy6828 95 ----DIMENEDVKLDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLVDSRWVVKLADFGLTEFK 158 (392)
Q Consensus 95 ----~~l~~~~~~l~~~~~~~i~~qi~~~l~ylH~~~iiiHrDlKp~NIll~~~~~~kl~DFGla~~~ 158 (392)
+++......+++..+..++.|+++||.|||++++ +||||||+||+++.++.+||+|||+++..
T Consensus 87 ~~L~~~~~~~~~~~~~~~~~~~~~ql~~al~~lH~~~i-~H~dl~p~nil~~~~~~~kl~dfg~~~~~ 153 (291)
T cd07844 87 TDLKQYMDDCGGGLSMHNVRLFLFQLLRGLAYCHQRRV-LHRDLKPQNLLISERGELKLADFGLARAK 153 (291)
T ss_pred CCHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhCCe-ecccCCHHHEEEcCCCCEEECcccccccc
Confidence 2233333368999999999999999999999999 99999999999999999999999998653
No 181
>cd05072 PTKc_Lyn Catalytic domain of the Protein Tyrosine Kinase, Lyn. Protein Tyrosine Kinase (PTK) family; Lyn kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lyn is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth fa
Probab=99.76 E-value=6.2e-18 Score=155.32 Aligned_cols=110 Identities=22% Similarity=0.310 Sum_probs=89.6
Q ss_pred eeccCCCCCcceeEEEEEEEeecCcEEEEEEcCCCChhHHHHHHHHHHH-------------------------------
Q psy6828 46 SLSSNPDSDFRYSAIFTPIGIYKGRIFAIKRIPKKSVDITRAMKKELKI------------------------------- 94 (392)
Q Consensus 46 ~~~~~~lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~~~~~~~~~~E~~~------------------------------- 94 (392)
+...+.+|+|+||.||++.. .+++.||+|.+..... ..+.+.+|+.+
T Consensus 8 ~~~~~~lg~g~~g~v~~~~~-~~~~~v~iK~~~~~~~-~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~ 85 (261)
T cd05072 8 IKLVKKLGAGQFGEVWMGYY-NNSTKVAVKTLKPGTM-SVQAFLEEANLMKTLQHDKLVRLYAVVTKEEPIYIITEYMAK 85 (261)
T ss_pred eEEeeecCCcCCceEEEEEe-cCCceEEEEEccCCch-hHHHHHHHHHHHHhCCCCCeeeEEEEEcCCCCcEEEEecCCC
Confidence 44567899999999999984 4667899999875443 24567777776
Q ss_pred ----HHhhc-CCcCCCHHHHHHHHHHHHHHHHHHhcCCcccccCCCCCceEEcCCceEEEeccccchhc
Q psy6828 95 ----DIMEN-EDVKLDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLVDSRWVVKLADFGLTEFK 158 (392)
Q Consensus 95 ----~~l~~-~~~~l~~~~~~~i~~qi~~~l~ylH~~~iiiHrDlKp~NIll~~~~~~kl~DFGla~~~ 158 (392)
+++.. ....+++..+..++.|++.||.|||+.++ +||||||+||+++.++.+||+|||++...
T Consensus 86 ~~L~~~l~~~~~~~~~~~~~~~~~~~l~~~l~~LH~~~i-~H~dl~p~nili~~~~~~~l~dfg~~~~~ 153 (261)
T cd05072 86 GSLLDFLKSDEGGKVLLPKLIDFSAQIAEGMAYIERKNY-IHRDLRAANVLVSESLMCKIADFGLARVI 153 (261)
T ss_pred CcHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCe-eccccchhhEEecCCCcEEECCCccceec
Confidence 22322 22357888999999999999999999999 99999999999999999999999999754
No 182
>cd05065 PTKc_EphR_B Catalytic domain of the Protein Tyrosine Kinases, Class EphB Ephrin Receptors. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; class EphB receptors; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). Class EphB receptors bind to transmembrane ephrin-B ligands. There are six vertebrate EhpB receptors (EphB1-6), which display promiscuous interactions with three ephrin-B ligands. One exception is EphB2, which also interacts with ephrin A5. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephr
Probab=99.76 E-value=2.6e-18 Score=158.66 Aligned_cols=111 Identities=24% Similarity=0.344 Sum_probs=92.8
Q ss_pred eccCCCCCcceeEEEEEEEeecCc---EEEEEEcCCCC-hhHHHHHHHHHHH----------------------------
Q psy6828 47 LSSNPDSDFRYSAIFTPIGIYKGR---IFAIKRIPKKS-VDITRAMKKELKI---------------------------- 94 (392)
Q Consensus 47 ~~~~~lg~G~~g~V~~~~~~~~~~---~vAiK~~~~~~-~~~~~~~~~E~~~---------------------------- 94 (392)
...+.+|+|+||.||+|....+++ .||||.+.... ....+.+.+|+.+
T Consensus 7 ~~~~~lg~g~~g~vy~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~lv~e~ 86 (269)
T cd05065 7 KIEEVIGAGEFGEVCRGRLKLPGKREIFVAIKTLKSGYTEKQRRDFLSEASIMGQFDHPNIIHLEGVVTKSRPVMIITEF 86 (269)
T ss_pred EEEeEecCCCCCeEEEEEEecCCCCceeEEEEEcCCCCCHHHHHHHHHHHHHHHhCCCcCcceEEEEECCCCceEEEEec
Confidence 345679999999999999887765 69999997642 3445678888776
Q ss_pred -------HHhhcCCcCCCHHHHHHHHHHHHHHHHHHhcCCcccccCCCCCceEEcCCceEEEeccccchhc
Q psy6828 95 -------DIMENEDVKLDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLVDSRWVVKLADFGLTEFK 158 (392)
Q Consensus 95 -------~~l~~~~~~l~~~~~~~i~~qi~~~l~ylH~~~iiiHrDlKp~NIll~~~~~~kl~DFGla~~~ 158 (392)
+++......+++.++..++.|++.||.|||++++ +||||||+||+++.++.+|++|||++...
T Consensus 87 ~~~~~L~~~l~~~~~~~~~~~~~~i~~~l~~al~~lH~~g~-~H~dl~p~nili~~~~~~kl~dfg~~~~~ 156 (269)
T cd05065 87 MENGALDSFLRQNDGQFTVIQLVGMLRGIAAGMKYLSEMNY-VHRDLAARNILVNSNLVCKVSDFGLSRFL 156 (269)
T ss_pred CCCCcHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHHCCE-eecccChheEEEcCCCcEEECCCcccccc
Confidence 4444444468999999999999999999999999 99999999999999999999999998754
No 183
>cd06645 STKc_MAP4K3 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 3. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated
Probab=99.76 E-value=1.2e-18 Score=160.60 Aligned_cols=111 Identities=25% Similarity=0.335 Sum_probs=91.9
Q ss_pred eeccCCCCCcceeEEEEEEEeecCcEEEEEEcCCCChhHHHHHHHHHHH-------------------------------
Q psy6828 46 SLSSNPDSDFRYSAIFTPIGIYKGRIFAIKRIPKKSVDITRAMKKELKI------------------------------- 94 (392)
Q Consensus 46 ~~~~~~lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~~~~~~~~~~E~~~------------------------------- 94 (392)
|...+.||+|+||.||.+.+..+++.||+|.++.........+.+|+.+
T Consensus 11 ~~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~e~~~~~~l~h~~ii~~~~~~~~~~~~~lv~e~~~~ 90 (267)
T cd06645 11 FELIQRIGSGTYGDVYKARNVNTGELAAIKVIKLEPGEDFAVVQQEIIMMKDCKHSNIVAYFGSYLRRDKLWICMEFCGG 90 (267)
T ss_pred HHHHHHhCCCCCeEEEEEEEcCCCcEEEEEEEecCchhHHHHHHHHHHHHHhCCCCCeeeEEEEEEeCCEEEEEEeccCC
Confidence 3445679999999999999999999999999876544444556666655
Q ss_pred ----HHhhcCCcCCCHHHHHHHHHHHHHHHHHHhcCCcccccCCCCCceEEcCCceEEEeccccchhc
Q psy6828 95 ----DIMENEDVKLDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLVDSRWVVKLADFGLTEFK 158 (392)
Q Consensus 95 ----~~l~~~~~~l~~~~~~~i~~qi~~~l~ylH~~~iiiHrDlKp~NIll~~~~~~kl~DFGla~~~ 158 (392)
+++... ..+++.++..++.|++.||.|||+.++ +|+||||+||+++.++.+||+|||++...
T Consensus 91 ~~L~~~~~~~-~~~~~~~~~~~~~~i~~~l~~lH~~~i-~H~dlkp~nili~~~~~~~l~dfg~~~~~ 156 (267)
T cd06645 91 GSLQDIYHVT-GPLSESQIAYVSRETLQGLYYLHSKGK-MHRDIKGANILLTDNGHVKLADFGVSAQI 156 (267)
T ss_pred CcHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHCCe-ecCCCCHHHEEECCCCCEEECcceeeeEc
Confidence 222222 268999999999999999999999999 99999999999999999999999998644
No 184
>PHA03207 serine/threonine kinase US3; Provisional
Probab=99.76 E-value=2.2e-18 Score=168.25 Aligned_cols=109 Identities=16% Similarity=0.161 Sum_probs=88.0
Q ss_pred eeeeccCCCCCcceeEEEEEEEe--ecCcEEEEEEcCCCChhHHHHHHHHHHH---------------------------
Q psy6828 44 QVSLSSNPDSDFRYSAIFTPIGI--YKGRIFAIKRIPKKSVDITRAMKKELKI--------------------------- 94 (392)
Q Consensus 44 ~~~~~~~~lg~G~~g~V~~~~~~--~~~~~vAiK~~~~~~~~~~~~~~~E~~~--------------------------- 94 (392)
..|...+.||+|+||.||++... .+++.||+|.+..... ..+|+.+
T Consensus 92 ~~y~i~~~Lg~G~~g~Vy~~~~~~~~~~~~v~vK~~~~~~~-----~~~E~~il~~l~h~~iv~~~~~~~~~~~~~lv~e 166 (392)
T PHA03207 92 MQYNILSSLTPGSEGEVFVCTKHGDEQRKKVIVKAVTGGKT-----PGREIDILKTISHRAIINLIHAYRWKSTVCMVMP 166 (392)
T ss_pred CceEEEEeecCCCCeEEEEEEEcCCccceeEEEEecccccc-----HHHHHHHHHhcCCCCccceeeeEeeCCEEEEEeh
Confidence 34677889999999999999754 3567899999865432 2334444
Q ss_pred -------HHhhcCCcCCCHHHHHHHHHHHHHHHHHHhcCCcccccCCCCCceEEcCCceEEEeccccchhcc
Q psy6828 95 -------DIMENEDVKLDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLVDSRWVVKLADFGLTEFKR 159 (392)
Q Consensus 95 -------~~l~~~~~~l~~~~~~~i~~qi~~~l~ylH~~~iiiHrDlKp~NIll~~~~~~kl~DFGla~~~~ 159 (392)
+++. ....+++.++..++.|++.||.|||++++ +||||||+|||++.++.+||+|||+++...
T Consensus 167 ~~~~~l~~~l~-~~~~l~~~~~~~i~~ql~~aL~~LH~~gi-vHrDlkp~Nill~~~~~~~l~DfG~a~~~~ 236 (392)
T PHA03207 167 KYKCDLFTYVD-RSGPLPLEQAITIQRRLLEALAYLHGRGI-IHRDVKTENIFLDEPENAVLGDFGAACKLD 236 (392)
T ss_pred hcCCCHHHHHH-hcCCCCHHHHHHHHHHHHHHHHHHHHCCc-cccCCCHHHEEEcCCCCEEEccCccccccC
Confidence 3332 22368999999999999999999999999 999999999999999999999999987543
No 185
>cd08219 STKc_Nek3 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 3. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 3 (Nek3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek3 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek3 is primarily localized in the cytoplasm and shows no cell cycle-dependent changes in its activity. It is present in the axons of neurons and affects morphogenesis and polarity through its regulation of microtubule acetylation. Nek3 modulates the signaling of the prolactin receptor through its activati
Probab=99.76 E-value=6.4e-18 Score=154.66 Aligned_cols=129 Identities=16% Similarity=0.197 Sum_probs=102.7
Q ss_pred ccCCCCCcceeEEEEEEEeecCcEEEEEEcCCCC-hhHHHHHHHHHHH--------------------------------
Q psy6828 48 SSNPDSDFRYSAIFTPIGIYKGRIFAIKRIPKKS-VDITRAMKKELKI-------------------------------- 94 (392)
Q Consensus 48 ~~~~lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~-~~~~~~~~~E~~~-------------------------------- 94 (392)
..+.+|+|+||.||++.+..+++.||+|.++... ....+.+.+|+.+
T Consensus 4 ~~~~lg~g~~g~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~ 83 (255)
T cd08219 4 VLRVVGEGSFGRALLVQHVNSDQKYAMKEIRLPKSSSAVEDSRKEAVLLAKMKHPNIVAFKESFEADGHLYIVMEYCDGG 83 (255)
T ss_pred EEEEeeccCCeEEEEEEEcCCCceEEEEEEEcCcchHHHHHHHHHHHHHHhCCCCCcceEEEEEEECCEEEEEEeeCCCC
Confidence 3567999999999999999999999999986432 2344566666655
Q ss_pred ---HHhh-cCCcCCCHHHHHHHHHHHHHHHHHHhcCCcccccCCCCCceEEcCCceEEEeccccchhccccc--------
Q psy6828 95 ---DIME-NEDVKLDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLVDSRWVVKLADFGLTEFKRDAE-------- 162 (392)
Q Consensus 95 ---~~l~-~~~~~l~~~~~~~i~~qi~~~l~ylH~~~iiiHrDlKp~NIll~~~~~~kl~DFGla~~~~~~~-------- 162 (392)
+++. .....+++..+..++.|++.||.|||++++ +|+||||+||++++++.++++|||+++......
T Consensus 84 ~l~~~~~~~~~~~~~~~~~~~~~~~i~~al~~lH~~~i-~H~dl~p~nili~~~~~~~l~dfg~~~~~~~~~~~~~~~~~ 162 (255)
T cd08219 84 DLMQKIKLQRGKLFPEDTILQWFVQMCLGVQHIHEKRV-LHRDIKSKNIFLTQNGKVKLGDFGSARLLTSPGAYACTYVG 162 (255)
T ss_pred cHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHhhCCc-ccCCCCcceEEECCCCcEEEcccCcceeecccccccccccC
Confidence 2222 123358899999999999999999999999 999999999999999999999999987543211
Q ss_pred ---------------cccccccceeeeeee
Q psy6828 163 ---------------YTGTDQHSFLQHTYH 177 (392)
Q Consensus 163 ---------------~~~~d~~s~g~~~~~ 177 (392)
....|+||+|+++|+
T Consensus 163 ~~~~~aPE~~~~~~~~~~~Dv~slG~i~~~ 192 (255)
T cd08219 163 TPYYVPPEIWENMPYNNKSDIWSLGCILYE 192 (255)
T ss_pred CccccCHHHHccCCcCchhhhhhhchhhee
Confidence 113499999999998
No 186
>cd05089 PTKc_Tie1 Catalytic domain of the Protein Tyrosine Kinase, Tie1. Protein Tyrosine Kinase (PTK) family; Tie1; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie1 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. No specific ligand has been identified for Tie1, although the angiopoietin, Ang-1, binds to Tie1 through integrins at high concentrations.
Probab=99.76 E-value=9.7e-18 Score=157.35 Aligned_cols=129 Identities=23% Similarity=0.300 Sum_probs=96.8
Q ss_pred ccCCCCCcceeEEEEEEEeecCc--EEEEEEcCCCC-hhHHHHHHHHHHH------------------------------
Q psy6828 48 SSNPDSDFRYSAIFTPIGIYKGR--IFAIKRIPKKS-VDITRAMKKELKI------------------------------ 94 (392)
Q Consensus 48 ~~~~lg~G~~g~V~~~~~~~~~~--~vAiK~~~~~~-~~~~~~~~~E~~~------------------------------ 94 (392)
..+.||+|+||.||++....++. .+++|.++... ....+.+.+|+.+
T Consensus 6 ~~~~lg~g~~g~v~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~~~~lv~e~~ 85 (297)
T cd05089 6 FEDVIGEGNFGQVIRAMIKKDGLKMNAAIKMLKEFASENDHRDFAGELEVLCKLGHHPNIINLLGACENRGYLYIAIEYA 85 (297)
T ss_pred eeeeecCCCcceEEEEEecCCCCcceeEEEEccccCCHHHHHHHHHHHHHHHhhcCCCchhheEEEEccCCcceEEEEec
Confidence 35579999999999999877765 47888886432 2334456666554
Q ss_pred ------HHhhcC---------------CcCCCHHHHHHHHHHHHHHHHHHhcCCcccccCCCCCceEEcCCceEEEeccc
Q psy6828 95 ------DIMENE---------------DVKLDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLVDSRWVVKLADFG 153 (392)
Q Consensus 95 ------~~l~~~---------------~~~l~~~~~~~i~~qi~~~l~ylH~~~iiiHrDlKp~NIll~~~~~~kl~DFG 153 (392)
+++... ...+++..+..++.|++.||.|||++++ +||||||+|||++.++.+||+|||
T Consensus 86 ~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~lH~~~i-vH~dlkp~Nill~~~~~~kl~dfg 164 (297)
T cd05089 86 PYGNLLDFLRKSRVLETDPAFAKEHGTASTLTSQQLLQFASDVATGMQYLSEKQF-IHRDLAARNVLVGENLASKIADFG 164 (297)
T ss_pred CCCcHHHHHHhccccccccccccccCccCCCCHHHHHHHHHHHHHHHHHHHHCCc-ccCcCCcceEEECCCCeEEECCcC
Confidence 222211 0147888999999999999999999999 999999999999999999999999
Q ss_pred cchhcccc----------------------ccccccccceeeeeee
Q psy6828 154 LTEFKRDA----------------------EYTGTDQHSFLQHTYH 177 (392)
Q Consensus 154 la~~~~~~----------------------~~~~~d~~s~g~~~~~ 177 (392)
++...... .....|+||||+++|+
T Consensus 165 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwSlG~il~e 210 (297)
T cd05089 165 LSRGEEVYVKKTMGRLPVRWMAIESLNYSVYTTKSDVWSFGVLLWE 210 (297)
T ss_pred CCccccceeccCCCCcCccccCchhhccCCCCchhhHHHHHHHHHH
Confidence 98532110 0112488888888887
No 187
>cd05606 STKc_beta_ARK Catalytic domain of the Protein Serine/Threonine Kinase, beta-adrenergic receptor kinase. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, beta-adrenergic receptor kinase (beta-ARK) group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. The beta-ARK group is co
Probab=99.76 E-value=2.6e-18 Score=159.71 Aligned_cols=106 Identities=18% Similarity=0.211 Sum_probs=84.1
Q ss_pred CCCCcceeEEEEEEEeecCcEEEEEEcCCCChh---HHHHHHHHHHH---------------------------------
Q psy6828 51 PDSDFRYSAIFTPIGIYKGRIFAIKRIPKKSVD---ITRAMKKELKI--------------------------------- 94 (392)
Q Consensus 51 ~lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~~~---~~~~~~~E~~~--------------------------------- 94 (392)
.||+|+||.||++.+..+++.||+|.+.+.... .......|...
T Consensus 1 ~ig~g~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~v~e~~~ 80 (278)
T cd05606 1 IIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMSYAFHTPDKLSFILDLMN 80 (278)
T ss_pred CcccCCCeEEEEEEEecCCCEEEEEEeeccccccchhHHHHHHHHHHHHHHHhCCCCcEeeeeeeeecCCEEEEEEecCC
Confidence 379999999999999999999999998765331 11112222211
Q ss_pred -----HHhhcCCcCCCHHHHHHHHHHHHHHHHHHhcCCcccccCCCCCceEEcCCceEEEeccccchhc
Q psy6828 95 -----DIMENEDVKLDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLVDSRWVVKLADFGLTEFK 158 (392)
Q Consensus 95 -----~~l~~~~~~l~~~~~~~i~~qi~~~l~ylH~~~iiiHrDlKp~NIll~~~~~~kl~DFGla~~~ 158 (392)
+++.. ...+++..+..++.|++.||.|||+.++ +||||||+||+++.++.+||+|||++...
T Consensus 81 g~~L~~~l~~-~~~l~~~~~~~~~~ql~~~l~~lH~~~i-~H~di~p~nili~~~~~~kl~dfg~~~~~ 147 (278)
T cd05606 81 GGDLHYHLSQ-HGVFSEAEMRFYAAEIILGLEHMHNRFV-VYRDLKPANILLDEHGHVRISDLGLACDF 147 (278)
T ss_pred CCcHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHHCCE-EcCCCCHHHEEECCCCCEEEccCcCcccc
Confidence 22222 2358999999999999999999999999 99999999999999999999999998644
No 188
>cd07850 STKc_JNK Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase (JNK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. They are also essential regulators of physiological and pathological processes and are involved in the pathogenesis of several diseases such as diabetes, atherosclerosis, stroke, Parkinson's and Alzheimer's. Vetebrates harbor three different JNK
Probab=99.76 E-value=1.6e-18 Score=166.86 Aligned_cols=134 Identities=22% Similarity=0.278 Sum_probs=103.5
Q ss_pred ceeeeccCCCCCcceeEEEEEEEeecCcEEEEEEcCCCC--hhHHHHHHHHHHH-------------H------------
Q psy6828 43 SQVSLSSNPDSDFRYSAIFTPIGIYKGRIFAIKRIPKKS--VDITRAMKKELKI-------------D------------ 95 (392)
Q Consensus 43 ~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~--~~~~~~~~~E~~~-------------~------------ 95 (392)
.+.|...+.||+|+||.||++.+..+++.||||.+.+.. ....+.+.+|+.+ +
T Consensus 15 ~~~y~~~~~lg~g~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~ 94 (353)
T cd07850 15 LKRYQNLKPIGSGAQGIVCAAYDTVTGQNVAIKKLSRPFQNVTHAKRAYRELVLMKLVNHKNIIGLLNVFTPQKSLEEFQ 94 (353)
T ss_pred hcceEEEEEeccCCCEEEEEEEECCCCCEEEEEecCccccChhHHHHHHHHHHHHHhcCCCCCcceeeeeccCCCccccC
Confidence 455677788999999999999999999999999986532 2334456667665 0
Q ss_pred -------Hhhc-----CCcCCCHHHHHHHHHHHHHHHHHHhcCCcccccCCCCCceEEcCCceEEEeccccchhcccccc
Q psy6828 96 -------IMEN-----EDVKLDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLVDSRWVVKLADFGLTEFKRDAEY 163 (392)
Q Consensus 96 -------~l~~-----~~~~l~~~~~~~i~~qi~~~l~ylH~~~iiiHrDlKp~NIll~~~~~~kl~DFGla~~~~~~~~ 163 (392)
++.. ....+++..+..++.|++.||.|||++++ +||||||+||+++.++.+||+|||+++.......
T Consensus 95 ~~~lv~e~~~~~l~~~~~~~l~~~~~~~~~~ql~~aL~~LH~~gi-~H~dlkp~Nil~~~~~~~kL~Dfg~~~~~~~~~~ 173 (353)
T cd07850 95 DVYLVMELMDANLCQVIQMDLDHERMSYLLYQMLCGIKHLHSAGI-IHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFM 173 (353)
T ss_pred cEEEEEeccCCCHHHHHhhcCCHHHHHHHHHHHHHHHHHHHhCCe-eeCCCCHHHEEECCCCCEEEccCccceeCCCCCC
Confidence 0000 01137888899999999999999999999 9999999999999999999999999875433211
Q ss_pred ----------------------ccccccceeeeeee
Q psy6828 164 ----------------------TGTDQHSFLQHTYH 177 (392)
Q Consensus 164 ----------------------~~~d~~s~g~~~~~ 177 (392)
...|+||+|+++|+
T Consensus 174 ~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~~ 209 (353)
T cd07850 174 MTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGE 209 (353)
T ss_pred CCCCcccccccCHHHHhCCCCCCchhhHhHHHHHHH
Confidence 12378888887777
No 189
>cd05148 PTKc_Srm_Brk Catalytic domain of the Protein Tyrosine Kinases, Srm and Brk. Protein Tyrosine Kinase (PTK) family; Src-related kinase lacking C-terminal regulatory tyrosine and N-terminal myristylation sites (Srm) and breast tumor kinase (Brk, also called protein tyrosine kinase 6); catalytic (c) domains. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Srm and Brk are a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases in general contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr; they are activated by autophosphorylation at the tyr kinase dom
Probab=99.75 E-value=1.4e-18 Score=159.53 Aligned_cols=130 Identities=22% Similarity=0.280 Sum_probs=104.6
Q ss_pred eeccCCCCCcceeEEEEEEEeecCcEEEEEEcCCCChhHHHHHHHHHHH-------------------------------
Q psy6828 46 SLSSNPDSDFRYSAIFTPIGIYKGRIFAIKRIPKKSVDITRAMKKELKI------------------------------- 94 (392)
Q Consensus 46 ~~~~~~lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~~~~~~~~~~E~~~------------------------------- 94 (392)
|...+.+|+|+||.||++.+.. ++.+|+|.+........+.+.+|+.+
T Consensus 8 y~~~~~ig~g~~~~vy~~~~~~-~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~~~~ 86 (261)
T cd05148 8 FTLERKLGSGYFGEVWEGLWKN-RVRVAIKILKSDDLLKQQDFQKEVQALKRLRHKHLISLFAVCSVGEPVYIITELMEK 86 (261)
T ss_pred HHHhhhhccCCCccEEEeEecC-CCcEEEEeccccchhhHHHHHHHHHHHhcCCCcchhheeeeEecCCCeEEEEeeccc
Confidence 3446789999999999999777 89999999987766556667777776
Q ss_pred ----HHhhc-CCcCCCHHHHHHHHHHHHHHHHHHhcCCcccccCCCCCceEEcCCceEEEeccccchhccccc-------
Q psy6828 95 ----DIMEN-EDVKLDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLVDSRWVVKLADFGLTEFKRDAE------- 162 (392)
Q Consensus 95 ----~~l~~-~~~~l~~~~~~~i~~qi~~~l~ylH~~~iiiHrDlKp~NIll~~~~~~kl~DFGla~~~~~~~------- 162 (392)
+++.. ....+++..+..++.|++.||.|||++++ +||||||+||+++.++.+||+|||++.......
T Consensus 87 ~~L~~~~~~~~~~~~~~~~~~~~~~~i~~al~~lH~~~i-~h~dl~~~nilv~~~~~~kl~d~g~~~~~~~~~~~~~~~~ 165 (261)
T cd05148 87 GSLLAFLRSPEGQVLPVASLIDMACQVAEGMAYLEEQNS-IHRDLAARNILVGEDLVCKVADFGLARLIKEDVYLSSDKK 165 (261)
T ss_pred CCHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHHHCCe-eccccCcceEEEcCCceEEEccccchhhcCCccccccCCC
Confidence 33332 22358999999999999999999999999 999999999999999999999999987543211
Q ss_pred ----------------cccccccceeeeeee
Q psy6828 163 ----------------YTGTDQHSFLQHTYH 177 (392)
Q Consensus 163 ----------------~~~~d~~s~g~~~~~ 177 (392)
....|+||+|+++|+
T Consensus 166 ~~~~~~~PE~~~~~~~~~~~DiwslG~~l~~ 196 (261)
T cd05148 166 IPYKWTAPEAASHGTFSTKSDVWSFGILLYE 196 (261)
T ss_pred CceEecCHHHHccCCCCchhhHHHHHHHHHH
Confidence 112488888888887
No 190
>cd07861 STKc_CDK1_euk Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 1 from higher eukaryotes-like. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyclin A complex controls G2
Probab=99.75 E-value=1.6e-18 Score=161.19 Aligned_cols=110 Identities=26% Similarity=0.463 Sum_probs=89.7
Q ss_pred ccCCCCCcceeEEEEEEEeecCcEEEEEEcCCCCh--hHHHHHHHHHHH-------------------------------
Q psy6828 48 SSNPDSDFRYSAIFTPIGIYKGRIFAIKRIPKKSV--DITRAMKKELKI------------------------------- 94 (392)
Q Consensus 48 ~~~~lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~~--~~~~~~~~E~~~------------------------------- 94 (392)
..+.||+|+||.||++.+..+++.||+|.++.... ...+.+.+|+.+
T Consensus 4 ~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~~~~ 83 (285)
T cd07861 4 KIEKIGEGTYGVVYKGRNKKTGQIVAMKKIRLESEEEGVPSTAIREISLLKELQHPNIVCLQDVLMQESRLYLIFEFLSM 83 (285)
T ss_pred EeeEecccCceEEEEEEECCCCcEEEEEEeccccccCCchHHHHHHHHHHHhcCCCCEeeeEEEEeeCCeEEEEEecCCC
Confidence 34679999999999999999999999999865422 223456666665
Q ss_pred ---HHhhc--CCcCCCHHHHHHHHHHHHHHHHHHhcCCcccccCCCCCceEEcCCceEEEeccccchhc
Q psy6828 95 ---DIMEN--EDVKLDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLVDSRWVVKLADFGLTEFK 158 (392)
Q Consensus 95 ---~~l~~--~~~~l~~~~~~~i~~qi~~~l~ylH~~~iiiHrDlKp~NIll~~~~~~kl~DFGla~~~ 158 (392)
+++.. ....+++..+..++.|++.||.|||++++ +||||||+||+++.++.+||+|||++...
T Consensus 84 ~l~~~~~~~~~~~~~~~~~~~~~~~qi~~~L~~lH~~~i-~H~dl~p~nil~~~~~~~~l~dfg~~~~~ 151 (285)
T cd07861 84 DLKKYLDSLPKGQYMDAELVKSYLYQILQGILFCHSRRV-LHRDLKPQNLLIDNKGVIKLADFGLARAF 151 (285)
T ss_pred CHHHHHhcCCCCCcCCHHHHHHHHHHHHHHHHHHHhCCe-eecCCCHHHEEEcCCCcEEECcccceeec
Confidence 22222 11368999999999999999999999999 99999999999999999999999988643
No 191
>KOG4721|consensus
Probab=99.75 E-value=2.4e-19 Score=171.41 Aligned_cols=131 Identities=21% Similarity=0.234 Sum_probs=102.0
Q ss_pred CCCCCcceeEEEEEEEeecCcEEEEEEcCCCCh---hHHHHHHHHHHH-------------------------HHhhcCC
Q psy6828 50 NPDSDFRYSAIFTPIGIYKGRIFAIKRIPKKSV---DITRAMKKELKI-------------------------DIMENED 101 (392)
Q Consensus 50 ~~lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~~---~~~~~~~~E~~~-------------------------~~l~~~~ 101 (392)
.=||.|+.|.||+|+.. ++.||||+++.-+. ..+..+.++..| ++|+.+.
T Consensus 130 eWlGSGaQGAVF~Grl~--netVAVKKV~elkETdIKHLRkLkH~NII~FkGVCtqsPcyCIiMEfCa~GqL~~VLka~~ 207 (904)
T KOG4721|consen 130 EWLGSGAQGAVFLGRLH--NETVAVKKVRELKETDIKHLRKLKHPNIITFKGVCTQSPCYCIIMEFCAQGQLYEVLKAGR 207 (904)
T ss_pred hhhccCcccceeeeecc--CceehhHHHhhhhhhhHHHHHhccCcceeeEeeeecCCceeEEeeeccccccHHHHHhccC
Confidence 34899999999999754 89999999864432 223333334333 4444444
Q ss_pred cCCCHHHHHHHHHHHHHHHHHHhcCCcccccCCCCCceEEcCCceEEEeccccchhccccc-------------------
Q psy6828 102 VKLDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLVDSRWVVKLADFGLTEFKRDAE------------------- 162 (392)
Q Consensus 102 ~~l~~~~~~~i~~qi~~~l~ylH~~~iiiHrDlKp~NIll~~~~~~kl~DFGla~~~~~~~------------------- 162 (392)
.++......|..+|+.|+.|||.+.| ||||||.-||||..+..+||+|||.++......
T Consensus 208 -~itp~llv~Wsk~IA~GM~YLH~hKI-IHRDLKSPNiLIs~~d~VKIsDFGTS~e~~~~STkMSFaGTVaWMAPEvIrn 285 (904)
T KOG4721|consen 208 -PITPSLLVDWSKGIAGGMNYLHLHKI-IHRDLKSPNILISYDDVVKISDFGTSKELSDKSTKMSFAGTVAWMAPEVIRN 285 (904)
T ss_pred -ccCHHHHHHHHHHhhhhhHHHHHhhH-hhhccCCCceEeeccceEEeccccchHhhhhhhhhhhhhhhHhhhCHHHhhc
Confidence 68888899999999999999999999 999999999999999999999999998765432
Q ss_pred ---cccccccceeeeeee--ccCCCCc
Q psy6828 163 ---YTGTDQHSFLQHTYH--VNRAGST 184 (392)
Q Consensus 163 ---~~~~d~~s~g~~~~~--~~~~~~~ 184 (392)
..+.|+||||+++|| +.+.+|-
T Consensus 286 ePcsEKVDIwSfGVVLWEmLT~EiPYk 312 (904)
T KOG4721|consen 286 EPCSEKVDIWSFGVVLWEMLTGEIPYK 312 (904)
T ss_pred CCcccccceehhHHHHHHHHhcCCCcc
Confidence 122399999999999 5555543
No 192
>KOG0608|consensus
Probab=99.75 E-value=6.8e-19 Score=170.15 Aligned_cols=159 Identities=19% Similarity=0.234 Sum_probs=119.3
Q ss_pred eeeeccCCCCCcceeEEEEEEEeecCcEEEEEEcCCCCh---hHHHHHHHHHHH--------------------------
Q psy6828 44 QVSLSSNPDSDFRYSAIFTPIGIYKGRIFAIKRIPKKSV---DITRAMKKELKI-------------------------- 94 (392)
Q Consensus 44 ~~~~~~~~lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~~---~~~~~~~~E~~~-------------------------- 94 (392)
..++..+.||-|+||+|.++....|...||+|.+++... .+...+..|..|
T Consensus 629 SmFvkik~iGvGAFGeV~Lv~KvDT~~lYAmKTLrKaDVl~rnQvaHVKAERDILAEADn~WVVrLyySFQDkdnLYFVM 708 (1034)
T KOG0608|consen 629 SMFVKIKTIGVGAFGEVCLVRKVDTRALYAMKTLRKADVLMRNQVAHVKAERDILAEADNEWVVRLYYSFQDKDNLYFVM 708 (1034)
T ss_pred cceEEEeeecccccceeEEEeecchhhHHHHhhhHHHHHHhhhhhhhhhhhhhhHhhcCCcceEEEEEEeccCCceEEEE
Confidence 346667899999999999999889999999999988765 233344455555
Q ss_pred HHhhcCC--------cCCCHHHHHHHHHHHHHHHHHHhcCCcccccCCCCCceEEcCCceEEEeccccchhcccc---cc
Q psy6828 95 DIMENED--------VKLDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLVDSRWVVKLADFGLTEFKRDA---EY 163 (392)
Q Consensus 95 ~~l~~~~--------~~l~~~~~~~i~~qi~~~l~ylH~~~iiiHrDlKp~NIll~~~~~~kl~DFGla~~~~~~---~~ 163 (392)
+|+-.++ +.|.|..++.++.++.+|+++.|..|. |||||||+|||||.+|++||+|||||.-+... .+
T Consensus 709 dYIPGGDmMSLLIrmgIFeE~LARFYIAEltcAiesVHkmGF-IHRDiKPDNILIDrdGHIKLTDFGLCTGfRWTHdskY 787 (1034)
T KOG0608|consen 709 DYIPGGDMMSLLIRMGIFEEDLARFYIAELTCAIESVHKMGF-IHRDIKPDNILIDRDGHIKLTDFGLCTGFRWTHDSKY 787 (1034)
T ss_pred eccCCccHHHHHHHhccCHHHHHHHHHHHHHHHHHHHHhccc-eecccCccceEEccCCceeeeeccccccceecccccc
Confidence 3332222 169999999999999999999999999 99999999999999999999999999743211 00
Q ss_pred cc-------------------------------------ccccceeeeeeeccC----CCCcccccccccchhhhccCCH
Q psy6828 164 TG-------------------------------------TDQHSFLQHTYHVNR----AGSTESLHCKCDEALLFEMLPR 202 (392)
Q Consensus 164 ~~-------------------------------------~d~~s~g~~~~~~~~----~~~~~~~d~~~~~~lL~~~lp~ 202 (392)
.. ..-.-.|+.-|.+|+ .+++...|+|..+.+|+.|+-.
T Consensus 788 Yq~gdH~RqDSmep~~e~~d~~~~lkvL~~ra~~~h~r~~ahslvgt~nyiapevl~r~g~~q~cdwws~gvil~em~~g 867 (1034)
T KOG0608|consen 788 YQEGDHHRQDSMEPSPEWADISKCLKVLERRAMRQHQRILAHSLVGTPNYIAPEVLARTGYTQLCDWWSVGVILYEMLVG 867 (1034)
T ss_pred ccCCCccccccCCCchhhccccccchHHHHHHHhhhhhhhhhhhcCCCcccChHHhcccCccccchhhHhhHHHHHHhhC
Confidence 00 022234667777665 5566777888888888887743
Q ss_pred H
Q psy6828 203 S 203 (392)
Q Consensus 203 ~ 203 (392)
.
T Consensus 868 ~ 868 (1034)
T KOG0608|consen 868 Q 868 (1034)
T ss_pred C
Confidence 3
No 193
>KOG0669|consensus
Probab=99.75 E-value=1.7e-19 Score=156.86 Aligned_cols=156 Identities=17% Similarity=0.267 Sum_probs=109.5
Q ss_pred eeeccCCCCCcceeEEEEEEEeecCcEEEEEEcCC----CCh--------hHHHHHHHHHHH------------------
Q psy6828 45 VSLSSNPDSDFRYSAIFTPIGIYKGRIFAIKRIPK----KSV--------DITRAMKKELKI------------------ 94 (392)
Q Consensus 45 ~~~~~~~lg~G~~g~V~~~~~~~~~~~vAiK~~~~----~~~--------~~~~~~~~E~~~------------------ 94 (392)
.|.....+|+|.||+||+++.+.+|+.||+|++-- ... ...+.+.+|...
T Consensus 18 ~yek~~kigqGtfgeVFkAr~~n~~kkvalkkvlmeneKeGfpitalreikiL~~lkHenv~nliEic~tk~Tp~~r~r~ 97 (376)
T KOG0669|consen 18 KYEKLAKIGQGTFGEVFKARSKNTGKKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEICRTKATPTNRDRA 97 (376)
T ss_pred HHHHHHhcCCchHHHHHHHhhcCccchhHHHHHHHhccccCCcHHHHHHHHHHHHhcchhHHHHHHHHhhccCCcccccc
Confidence 34446679999999999999999999999987632 111 111122222221
Q ss_pred --------------HHhhcCCcCCCHHHHHHHHHHHHHHHHHHhcCCcccccCCCCCceEEcCCceEEEeccccchhccc
Q psy6828 95 --------------DIMENEDVKLDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLVDSRWVVKLADFGLTEFKRD 160 (392)
Q Consensus 95 --------------~~l~~~~~~l~~~~~~~i~~qi~~~l~ylH~~~iiiHrDlKp~NIll~~~~~~kl~DFGla~~~~~ 160 (392)
-++.+...+++..++..++.++.+||.|+|+..+ +|||+||+|+||+.+|.+||+|||+++.+..
T Consensus 98 t~ylVf~~cehDLaGlLsn~~vr~sls~Ikk~Mk~Lm~GL~~iHr~ki-lHRDmKaaNvLIt~dgilklADFGlar~fs~ 176 (376)
T KOG0669|consen 98 TFYLVFDFCEHDLAGLLSNRKVRFSLSEIKKVMKGLMNGLYYIHRNKI-LHRDMKAANVLITKDGILKLADFGLARAFST 176 (376)
T ss_pred eeeeeHHHhhhhHHHHhcCccccccHHHHHHHHHHHHHHHHHHHHhhH-HhhcccHhhEEEcCCceEEeeccccccceec
Confidence 3333444579999999999999999999999999 9999999999999999999999999987655
Q ss_pred cccccccccceee-eeee-ccC-----CCCcccccccccchhhhccCC
Q psy6828 161 AEYTGTDQHSFLQ-HTYH-VNR-----AGSTESLHCKCDEALLFEMLP 201 (392)
Q Consensus 161 ~~~~~~d~~s~g~-~~~~-~~~-----~~~~~~~d~~~~~~lL~~~lp 201 (392)
......--|.-.+ ++|. .|+ ..+..++|.|..++++..|..
T Consensus 177 ~~n~~kprytnrvvTLwYrppEllLG~r~yg~~iDiWgAgCimaeMwt 224 (376)
T KOG0669|consen 177 SKNVVKPRYTNRVVTLWYRPPELLLGDREYGPPIDIWGAGCIMAEMWT 224 (376)
T ss_pred ccccCCCCcccceeeeecCCHHHhhcccccCCcchhHhHHHHHHHHHc
Confidence 4433322232222 2333 332 445556777777777666654
No 194
>cd05039 PTKc_Csk_like Catalytic domain of C-terminal Src kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk) subfamily; catalytic (c) domain. The Csk subfamily is composed of Csk, Chk, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk and Chk are translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk
Probab=99.75 E-value=5.8e-18 Score=155.04 Aligned_cols=126 Identities=22% Similarity=0.305 Sum_probs=100.2
Q ss_pred ccCCCCCcceeEEEEEEEeecCcEEEEEEcCCCChhHHHHHHHHHHH---------------------------------
Q psy6828 48 SSNPDSDFRYSAIFTPIGIYKGRIFAIKRIPKKSVDITRAMKKELKI--------------------------------- 94 (392)
Q Consensus 48 ~~~~lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~~~~~~~~~~E~~~--------------------------------- 94 (392)
..+.+|+|+||.||++.. .|+.||+|.+..... ..+.+.+|+.+
T Consensus 10 ~~~~ig~g~~g~v~~~~~--~~~~v~iK~~~~~~~-~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~~~~~~ 86 (256)
T cd05039 10 LGATIGKGEFGDVMLGDY--RGQKVAVKCLKDDST-AAQAFLAEASVMTTLRHPNLVQLLGVVLQGNPLYIVTEYMAKGS 86 (256)
T ss_pred ceeeeecCCCceEEEEEe--cCcEEEEEEeccchh-HHHHHHHHHHHHHhcCCcceeeeEEEEcCCCCeEEEEEecCCCc
Confidence 356799999999999975 489999999976644 45667777766
Q ss_pred --HHhhcCC-cCCCHHHHHHHHHHHHHHHHHHhcCCcccccCCCCCceEEcCCceEEEeccccchhccccc---------
Q psy6828 95 --DIMENED-VKLDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLVDSRWVVKLADFGLTEFKRDAE--------- 162 (392)
Q Consensus 95 --~~l~~~~-~~l~~~~~~~i~~qi~~~l~ylH~~~iiiHrDlKp~NIll~~~~~~kl~DFGla~~~~~~~--------- 162 (392)
+++.... ..+++..+..++.|++.||.|||++++ +||||||+||+++.++.+||+|||+++......
T Consensus 87 L~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lh~~~i-~H~di~p~Nili~~~~~~~l~d~g~~~~~~~~~~~~~~~~~~ 165 (256)
T cd05039 87 LVDYLRSRGRAVITLAQQLGFALDVCEGMEYLEEKNF-VHRDLAARNVLVSEDLVAKVSDFGLAKEASQGQDSGKLPVKW 165 (256)
T ss_pred HHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCc-cchhcccceEEEeCCCCEEEcccccccccccccccCCCcccc
Confidence 3332222 258999999999999999999999999 999999999999999999999999887543211
Q ss_pred -----------cccccccceeeeeee
Q psy6828 163 -----------YTGTDQHSFLQHTYH 177 (392)
Q Consensus 163 -----------~~~~d~~s~g~~~~~ 177 (392)
....|+||+|+++|+
T Consensus 166 ~ape~~~~~~~~~~~Di~slG~il~~ 191 (256)
T cd05039 166 TAPEALREKKFSTKSDVWSFGILLWE 191 (256)
T ss_pred cCchhhcCCcCCcHHHHHHHHHHHHH
Confidence 012388888888876
No 195
>cd06656 STKc_PAK3 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 3. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 3, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK3 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding
Probab=99.75 E-value=2e-18 Score=162.05 Aligned_cols=115 Identities=21% Similarity=0.306 Sum_probs=95.3
Q ss_pred eeeeccCCCCCcceeEEEEEEEeecCcEEEEEEcCCCChhHHHHHHHHHHH--------------------------HHh
Q psy6828 44 QVSLSSNPDSDFRYSAIFTPIGIYKGRIFAIKRIPKKSVDITRAMKKELKI--------------------------DIM 97 (392)
Q Consensus 44 ~~~~~~~~lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~~~~~~~~~~E~~~--------------------------~~l 97 (392)
..|...+.||+|+||.||++.+..+++.||+|.+........+.+.+|+.+ +++
T Consensus 19 ~~y~~~~~lg~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv~e~~ 98 (297)
T cd06656 19 KKYTRFEKIGQGASGTVYTAIDIATGQEVAIKQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYLVGDELWVVMEYL 98 (297)
T ss_pred hhceeeeeeccCCCeEEEEEEECCCCCEEEEEEEecCccchHHHHHHHHHHHHhCCCCCEeeEEEEEecCCEEEEeeccc
Confidence 455667789999999999999989999999999976555555667777765 222
Q ss_pred hcC-------CcCCCHHHHHHHHHHHHHHHHHHhcCCcccccCCCCCceEEcCCceEEEeccccchhcc
Q psy6828 98 ENE-------DVKLDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLVDSRWVVKLADFGLTEFKR 159 (392)
Q Consensus 98 ~~~-------~~~l~~~~~~~i~~qi~~~l~ylH~~~iiiHrDlKp~NIll~~~~~~kl~DFGla~~~~ 159 (392)
.+. ...+++.++..++.|++.||.|||+.++ +||||||+||+++.++.++|+|||++....
T Consensus 99 ~~~~L~~~~~~~~~~~~~~~~~~~~l~~~L~~LH~~~i-~H~dL~p~Nili~~~~~~~l~Dfg~~~~~~ 166 (297)
T cd06656 99 AGGSLTDVVTETCMDEGQIAAVCRECLQALDFLHSNQV-IHRDIKSDNILLGMDGSVKLTDFGFCAQIT 166 (297)
T ss_pred CCCCHHHHHHhCCCCHHHHHHHHHHHHHHHHHHHHCCc-ccCCCCHHHEEECCCCCEEECcCccceEcc
Confidence 211 1247889999999999999999999999 999999999999999999999999987543
No 196
>cd05067 PTKc_Lck_Blk Catalytic domain of the Protein Tyrosine Kinases, Lymphocyte-specific kinase and Blk. Protein Tyrosine Kinase (PTK) family; Lck and Blk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lck (lymphocyte-specific kinase) and Blk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Sr
Probab=99.75 E-value=6.3e-18 Score=155.25 Aligned_cols=129 Identities=24% Similarity=0.310 Sum_probs=101.4
Q ss_pred eeccCCCCCcceeEEEEEEEeecCcEEEEEEcCCCChhHHHHHHHHHHH-------------------------------
Q psy6828 46 SLSSNPDSDFRYSAIFTPIGIYKGRIFAIKRIPKKSVDITRAMKKELKI------------------------------- 94 (392)
Q Consensus 46 ~~~~~~lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~~~~~~~~~~E~~~------------------------------- 94 (392)
+...+.||+|+||.||++.. .+++.||+|.+...... .+.+.+|+.+
T Consensus 8 ~~~~~~ig~G~~g~v~~~~~-~~~~~~a~K~~~~~~~~-~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~v~e~~~~~ 85 (260)
T cd05067 8 LKLVKKLGAGQFGEVWMGYY-NGHTKVAIKSLKQGSMS-PEAFLAEANLMKQLQHPRLVRLYAVVTQEPIYIITEYMENG 85 (260)
T ss_pred ceeeeeeccCccceEEeeec-CCCceEEEEEecCCCCc-HHHHHHHHHHHHhcCCcCeeeEEEEEccCCcEEEEEcCCCC
Confidence 34466799999999999984 46788999999765543 3456777666
Q ss_pred ---HHhhc-CCcCCCHHHHHHHHHHHHHHHHHHhcCCcccccCCCCCceEEcCCceEEEeccccchhccccc--------
Q psy6828 95 ---DIMEN-EDVKLDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLVDSRWVVKLADFGLTEFKRDAE-------- 162 (392)
Q Consensus 95 ---~~l~~-~~~~l~~~~~~~i~~qi~~~l~ylH~~~iiiHrDlKp~NIll~~~~~~kl~DFGla~~~~~~~-------- 162 (392)
+++.. ....+++.++..++.|++.||.|||+.++ +||||||+||++++++.++|+|||++.......
T Consensus 86 ~L~~~~~~~~~~~~~~~~~~~i~~~i~~al~~LH~~~i-~H~dl~p~ni~i~~~~~~~l~dfg~~~~~~~~~~~~~~~~~ 164 (260)
T cd05067 86 SLVDFLKTPEGIKLTINKLIDMAAQIAEGMAFIERKNY-IHRDLRAANILVSETLCCKIADFGLARLIEDNEYTAREGAK 164 (260)
T ss_pred CHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCe-ecccccHHhEEEcCCCCEEEccCcceeecCCCCcccccCCc
Confidence 22222 23368999999999999999999999999 999999999999999999999999986543111
Q ss_pred ----------------cccccccceeeeeee
Q psy6828 163 ----------------YTGTDQHSFLQHTYH 177 (392)
Q Consensus 163 ----------------~~~~d~~s~g~~~~~ 177 (392)
....|+||+|+++|+
T Consensus 165 ~~~~y~~pe~~~~~~~~~~~Di~slG~~l~e 195 (260)
T cd05067 165 FPIKWTAPEAINYGTFTIKSDVWSFGILLTE 195 (260)
T ss_pred ccccccCHHHhccCCcCcccchHHHHHHHHH
Confidence 112489999988887
No 197
>cd05054 PTKc_VEGFR Catalytic domain of the Protein Tyrosine Kinases, Vascular Endothelial Growth Factor Receptors. Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor (VEGFR) subfamily; catalytic (c) domain. The VEGFR subfamily consists of VEGFR1 (Flt1), VEGFR2 (Flk1), VEGFR3 (Flt4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to recepto
Probab=99.75 E-value=2.8e-18 Score=164.04 Aligned_cols=55 Identities=33% Similarity=0.397 Sum_probs=51.8
Q ss_pred CCCHHHHHHHHHHHHHHHHHHhcCCcccccCCCCCceEEcCCceEEEeccccchhc
Q psy6828 103 KLDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLVDSRWVVKLADFGLTEFK 158 (392)
Q Consensus 103 ~l~~~~~~~i~~qi~~~l~ylH~~~iiiHrDlKp~NIll~~~~~~kl~DFGla~~~ 158 (392)
.+++..+..++.|++.||.|||++++ +||||||+|||++.++.+||+|||+++..
T Consensus 169 ~l~~~~~~~~~~qi~~aL~~lH~~~i-vHrDikp~Nill~~~~~vkL~DfG~a~~~ 223 (337)
T cd05054 169 PLTLEDLISYSFQVARGMEFLASRKC-IHRDLAARNILLSENNVVKICDFGLARDI 223 (337)
T ss_pred CCCHHHHHHHHHHHHHHHHHHHhCCe-ecCCCCcceEEEeCCCcEEEeccccchhc
Confidence 47888899999999999999999999 99999999999999999999999999764
No 198
>cd07841 STKc_CDK7 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 7. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 7 (CDK7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK7 plays essential roles in the cell cycle and in transcription. It associates with cyclin H and MAT1 and acts as a CDK-Activating Kinase (CAK) by phosphorylating and activating cell cycle CDKs (CDK1/2/4/6). In the brain, it activates CDK5. CDK7 is
Probab=99.75 E-value=2.3e-18 Score=161.42 Aligned_cols=111 Identities=31% Similarity=0.440 Sum_probs=90.9
Q ss_pred ccCCCCCcceeEEEEEEEeecCcEEEEEEcCCCChh-----HHHHHHHHHHH----------------------------
Q psy6828 48 SSNPDSDFRYSAIFTPIGIYKGRIFAIKRIPKKSVD-----ITRAMKKELKI---------------------------- 94 (392)
Q Consensus 48 ~~~~lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~~~-----~~~~~~~E~~~---------------------------- 94 (392)
..+.||+|+||.||+|.+..+++.||||.+...... ....+.+|+.+
T Consensus 4 ~~~~lg~g~~~~vy~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv~e~ 83 (298)
T cd07841 4 KGKKLGEGTYAVVYKARDKETGRIVAIKKIKLGERKEAKDGINFTALREIKLLQELKHPNIIGLLDVFGHKSNINLVFEF 83 (298)
T ss_pred eeeeeeeccccEEEEEEECCCCcEEEEEEEeccccccccchhhHHHHHHHHHHhhcCCCCChhhhheeecCCEEEEEEcc
Confidence 345699999999999999999999999999765432 23345556555
Q ss_pred ------HHhhcCCcCCCHHHHHHHHHHHHHHHHHHhcCCcccccCCCCCceEEcCCceEEEeccccchhcc
Q psy6828 95 ------DIMENEDVKLDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLVDSRWVVKLADFGLTEFKR 159 (392)
Q Consensus 95 ------~~l~~~~~~l~~~~~~~i~~qi~~~l~ylH~~~iiiHrDlKp~NIll~~~~~~kl~DFGla~~~~ 159 (392)
+++......+++..+..++.|+++||.|||++++ +|+||||+||+++.++.+||+|||+++...
T Consensus 84 ~~~~L~~~i~~~~~~~~~~~~~~~~~qi~~al~~lH~~~i-~H~dl~p~nill~~~~~~~l~dfg~~~~~~ 153 (298)
T cd07841 84 METDLEKVIKDKSIVLTPADIKSYMLMTLRGLEYLHSNWI-LHRDLKPNNLLIASDGVLKLADFGLARSFG 153 (298)
T ss_pred cCCCHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHhCCe-eecCCChhhEEEcCCCCEEEccceeeeecc
Confidence 2333332368999999999999999999999999 999999999999999999999999987543
No 199
>cd05111 PTK_HER3 Pseudokinase domain of the Protein Tyrosine Kinase, HER3. Protein Tyrosine Kinase (PTK) family; HER3 (ErbB3); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER3 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr r
Probab=99.75 E-value=7.2e-18 Score=156.75 Aligned_cols=111 Identities=25% Similarity=0.348 Sum_probs=88.9
Q ss_pred eccCCCCCcceeEEEEEEEeecCc----EEEEEEcCCCCh-hHHHHHHHHHHH---------------------------
Q psy6828 47 LSSNPDSDFRYSAIFTPIGIYKGR----IFAIKRIPKKSV-DITRAMKKELKI--------------------------- 94 (392)
Q Consensus 47 ~~~~~lg~G~~g~V~~~~~~~~~~----~vAiK~~~~~~~-~~~~~~~~E~~~--------------------------- 94 (392)
...+.||+|+||+||+|....+++ .+++|.+..... .....+..|+..
T Consensus 10 ~~~~~lg~G~~~~vy~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~l~~l~h~~iv~~~~~~~~~~~~~i~e~ 89 (279)
T cd05111 10 RKLKLLGSGVFGTVHKGIWIPEGDSIKIPVAIKTIQDRSGRQTFQEITDHMLAMGSLDHAYIVRLLGICPGASLQLVTQL 89 (279)
T ss_pred eeccccCccCCcceEEEEEcCCCCceeeEEEEeecccccchHHHHHHHHHHHHHhcCCCCCcceEEEEECCCccEEEEEe
Confidence 345679999999999999877776 478888864432 233455555543
Q ss_pred -------HHhhcCCcCCCHHHHHHHHHHHHHHHHHHhcCCcccccCCCCCceEEcCCceEEEeccccchhc
Q psy6828 95 -------DIMENEDVKLDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLVDSRWVVKLADFGLTEFK 158 (392)
Q Consensus 95 -------~~l~~~~~~l~~~~~~~i~~qi~~~l~ylH~~~iiiHrDlKp~NIll~~~~~~kl~DFGla~~~ 158 (392)
+++......+++..+..++.|++.||.|||++++ +||||||+||+++.++.+||+|||+++..
T Consensus 90 ~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~i-iH~dlkp~nili~~~~~~kl~Dfg~~~~~ 159 (279)
T cd05111 90 SPLGSLLDHVRQHRDSLDPQRLLNWCVQIAKGMYYLEEHRM-VHRNLAARNILLKSDSIVQIADFGVADLL 159 (279)
T ss_pred CCCCcHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHCCE-eccccCcceEEEcCCCcEEEcCCccceec
Confidence 4444444468999999999999999999999999 99999999999999999999999999754
No 200
>KOG0579|consensus
Probab=99.75 E-value=2.9e-19 Score=172.59 Aligned_cols=108 Identities=24% Similarity=0.286 Sum_probs=94.2
Q ss_pred cCCCCCcceeEEEEEEEeecCcEEEEEEcCCCChhHHHHHHHHHHH----------------------------------
Q psy6828 49 SNPDSDFRYSAIFTPIGIYKGRIFAIKRIPKKSVDITRAMKKELKI---------------------------------- 94 (392)
Q Consensus 49 ~~~lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~~~~~~~~~~E~~~---------------------------------- 94 (392)
...||.|+||+||++.++.++-.-|-|.+...+-..++.+.-|+.|
T Consensus 37 iGELGDGAFGKVyKA~nket~~lAAaKvIetkseEELEDylVEIeILa~CdHP~ivkLl~ayy~enkLwiliEFC~GGAV 116 (1187)
T KOG0579|consen 37 IGELGDGAFGKVYKAVNKETKLLAAAKVIETKSEEELEDYLVEIEILAECDHPVIVKLLSAYYFENKLWILIEFCGGGAV 116 (1187)
T ss_pred HhhhcCccchhhhhhhcccchhhhhhhhhcccchhHHhhhhhhhhhhhcCCChHHHHHHHHHhccCceEEEEeecCCchH
Confidence 4579999999999999998888889999988887888888888888
Q ss_pred -HHhhcCCcCCCHHHHHHHHHHHHHHHHHHhcCCcccccCCCCCceEEcCCceEEEeccccchh
Q psy6828 95 -DIMENEDVKLDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLVDSRWVVKLADFGLTEF 157 (392)
Q Consensus 95 -~~l~~~~~~l~~~~~~~i~~qi~~~l~ylH~~~iiiHrDlKp~NIll~~~~~~kl~DFGla~~ 157 (392)
.++-.-+..|++.++..+++|++.||.|||+++| ||||||..|||++-+|.++|+|||.+..
T Consensus 117 DaimlEL~r~LtE~QIqvvc~q~ldALn~LHs~~i-IHRDLKAGNiL~TldGdirLADFGVSAK 179 (1187)
T KOG0579|consen 117 DAIMLELGRVLTEDQIQVVCYQVLDALNWLHSQNI-IHRDLKAGNILLTLDGDIRLADFGVSAK 179 (1187)
T ss_pred hHHHHHhccccchHHHHHHHHHHHHHHHHHhhcch-hhhhccccceEEEecCcEeeeccccccc
Confidence 1111122269999999999999999999999999 9999999999999999999999999763
No 201
>cd08228 STKc_Nek6 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 6. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 is required for the transition from metaphase to anaphase. It also plays important roles in mitotic spindle formation and cytokinesis. Activated by Nek9 during mitosis, Nek6 phosphorylates Eg5, a kinesin that is important for spindle bipolarity. Nek6 localizes to spindle microtubules during metaphase
Probab=99.75 E-value=2.8e-18 Score=158.10 Aligned_cols=112 Identities=15% Similarity=0.274 Sum_probs=91.2
Q ss_pred eeccCCCCCcceeEEEEEEEeecCcEEEEEEcCCCC---hhHHHHHHHHHHH----------------------------
Q psy6828 46 SLSSNPDSDFRYSAIFTPIGIYKGRIFAIKRIPKKS---VDITRAMKKELKI---------------------------- 94 (392)
Q Consensus 46 ~~~~~~lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~---~~~~~~~~~E~~~---------------------------- 94 (392)
|...+.+|+|+||.||++.+..+++.||||.++... ......+.+|+.+
T Consensus 4 ~~i~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~ 83 (267)
T cd08228 4 FQIEKKIGRGQFSEVYRATCLLDRKPVALKKVQIFEMMDAKARQDCVKEIDLLKQLNHPNVIKYLDSFIEDNELNIVLEL 83 (267)
T ss_pred eeeeeeeccCCCeeEEEEEEeCCCCEEEEEEeeccccCCHHHHHHHHHHHHHHHhCCCcceeeeeeeEEECCeEEEEEEe
Confidence 345667999999999999999999999999886432 2334456777666
Q ss_pred -------HHhh---cCCcCCCHHHHHHHHHHHHHHHHHHhcCCcccccCCCCCceEEcCCceEEEeccccchhc
Q psy6828 95 -------DIME---NEDVKLDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLVDSRWVVKLADFGLTEFK 158 (392)
Q Consensus 95 -------~~l~---~~~~~l~~~~~~~i~~qi~~~l~ylH~~~iiiHrDlKp~NIll~~~~~~kl~DFGla~~~ 158 (392)
+++. .....+++..+..++.|++.||.|||++++ +|+||||+||+++.++.++|+|||++...
T Consensus 84 ~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~i-~H~dl~~~nil~~~~~~~~l~d~g~~~~~ 156 (267)
T cd08228 84 ADAGDLSQMIKYFKKQKRLIPERTVWKYFVQLCSAVEHMHSRRV-MHRDIKPANVFITATGVVKLGDLGLGRFF 156 (267)
T ss_pred cCCCcHHHHHHHhhhccCCCCHHHHHHHHHHHHHHHHHHhhCCe-eCCCCCHHHEEEcCCCCEEECccccceec
Confidence 1221 122347889999999999999999999999 99999999999999999999999988754
No 202
>cd05069 PTKc_Yes Catalytic domain of the Protein Tyrosine Kinase, Yes. Protein Tyrosine Kinase (PTK) family; Yes kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Yes (or c-Yes) is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine an
Probab=99.75 E-value=8.8e-18 Score=154.35 Aligned_cols=129 Identities=24% Similarity=0.288 Sum_probs=99.8
Q ss_pred eeccCCCCCcceeEEEEEEEeecCcEEEEEEcCCCChhHHHHHHHHHHH-------------------------------
Q psy6828 46 SLSSNPDSDFRYSAIFTPIGIYKGRIFAIKRIPKKSVDITRAMKKELKI------------------------------- 94 (392)
Q Consensus 46 ~~~~~~lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~~~~~~~~~~E~~~------------------------------- 94 (392)
+...+.||+|+||.||++.+..+ ..+|+|.+..... ..+.+.+|+.+
T Consensus 8 ~~~~~~ig~g~~~~v~~~~~~~~-~~~~lK~~~~~~~-~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~v~e~~~~~ 85 (260)
T cd05069 8 LRLDVKLGQGCFGEVWMGTWNGT-TKVAIKTLKPGTM-MPEAFLQEAQIMKKLRHDKLVPLYAVVSEEPIYIVTEFMGKG 85 (260)
T ss_pred eeeeeeecCcCCCeEEEEEEcCC-ceEEEEEcccCCc-cHHHHHHHHHHHHhCCCCCeeeEEEEEcCCCcEEEEEcCCCC
Confidence 55567899999999999986543 5699999875543 23456777766
Q ss_pred ---HHhhc-CCcCCCHHHHHHHHHHHHHHHHHHhcCCcccccCCCCCceEEcCCceEEEeccccchhccccc--------
Q psy6828 95 ---DIMEN-EDVKLDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLVDSRWVVKLADFGLTEFKRDAE-------- 162 (392)
Q Consensus 95 ---~~l~~-~~~~l~~~~~~~i~~qi~~~l~ylH~~~iiiHrDlKp~NIll~~~~~~kl~DFGla~~~~~~~-------- 162 (392)
+++.. ....+++..+..++.|++.||.|||+.++ +||||||+||++++++.++|+|||+++......
T Consensus 86 ~L~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lH~~~i-~H~dl~~~Nill~~~~~~~l~dfg~~~~~~~~~~~~~~~~~ 164 (260)
T cd05069 86 SLLDFLKEGDGKYLKLPQLVDMAAQIADGMAYIERMNY-IHRDLRAANILVGDNLVCKIADFGLARLIEDNEYTARQGAK 164 (260)
T ss_pred CHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCE-eecccCcceEEEcCCCeEEECCCccceEccCCcccccCCCc
Confidence 33322 22247889999999999999999999999 999999999999999999999999987542211
Q ss_pred ----------------cccccccceeeeeee
Q psy6828 163 ----------------YTGTDQHSFLQHTYH 177 (392)
Q Consensus 163 ----------------~~~~d~~s~g~~~~~ 177 (392)
...+|+||+|+++|+
T Consensus 165 ~~~~y~~Pe~~~~~~~~~~~Di~slG~~l~e 195 (260)
T cd05069 165 FPIKWTAPEAALYGRFTIKSDVWSFGILLTE 195 (260)
T ss_pred cchhhCCHHHhccCCcChHHHHHHHHHHHHH
Confidence 012488999988888
No 203
>cd05103 PTKc_VEGFR2 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 2. Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 2 (VEGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR2 (or Flk1) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. The carboxyl terminus of VEGFR2 plays an important role in its autophosp
Probab=99.75 E-value=9.6e-18 Score=160.79 Aligned_cols=54 Identities=30% Similarity=0.383 Sum_probs=50.2
Q ss_pred CCHHHHHHHHHHHHHHHHHHhcCCcccccCCCCCceEEcCCceEEEeccccchhc
Q psy6828 104 LDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLVDSRWVVKLADFGLTEFK 158 (392)
Q Consensus 104 l~~~~~~~i~~qi~~~l~ylH~~~iiiHrDlKp~NIll~~~~~~kl~DFGla~~~ 158 (392)
+++..+..++.|++.||.|||++++ +||||||+|||++.++.+||+|||++...
T Consensus 176 ~~~~~~~~~~~qi~~al~~lH~~~i-~H~dikp~Nil~~~~~~~kl~dfg~~~~~ 229 (343)
T cd05103 176 LTLEDLICYSFQVAKGMEFLASRKC-IHRDLAARNILLSENNVVKICDFGLARDI 229 (343)
T ss_pred CCHHHHHHHHHHHHHHHHHHHhCCe-ecCCCccCeEEEcCCCcEEEEeccccccc
Confidence 5777888999999999999999999 99999999999999999999999998753
No 204
>cd08529 STKc_FA2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii FA2 and similar domains. Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii FA2-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii FA2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes FA2 and CNK4. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii FA2 was discovered in a genetic screen for deflagellation-defective mutants. It is essential for basal-body/centriole-associated microtubule severing, and plays a role in cell cyc
Probab=99.75 E-value=6.1e-18 Score=154.64 Aligned_cols=128 Identities=19% Similarity=0.281 Sum_probs=102.4
Q ss_pred cCCCCCcceeEEEEEEEeecCcEEEEEEcCCCC--hhHHHHHHHHHHH--------------------------------
Q psy6828 49 SNPDSDFRYSAIFTPIGIYKGRIFAIKRIPKKS--VDITRAMKKELKI-------------------------------- 94 (392)
Q Consensus 49 ~~~lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~--~~~~~~~~~E~~~-------------------------------- 94 (392)
.+.+|+|+||.||++.+..+++.|++|.+.... ....+.+.+|+.+
T Consensus 5 ~~~l~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~ 84 (256)
T cd08529 5 LNKIGKGSFGVVFKVVRKADKRVYAMKQIDLSKMNRREREEAIDEARVLAKLDSSYIIRYYESFLDKGKLNIVMEYAENG 84 (256)
T ss_pred eEEecCCCCeEEEEEEEcCCCcEEEEEEeehhhCCHHHHHHHHHHHHHHHhcCCCCeehheeeeccCCEEEEEEEeCCCC
Confidence 456999999999999999999999999987543 2344566777766
Q ss_pred ---HHhhcC-CcCCCHHHHHHHHHHHHHHHHHHhcCCcccccCCCCCceEEcCCceEEEeccccchhccccc--------
Q psy6828 95 ---DIMENE-DVKLDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLVDSRWVVKLADFGLTEFKRDAE-------- 162 (392)
Q Consensus 95 ---~~l~~~-~~~l~~~~~~~i~~qi~~~l~ylH~~~iiiHrDlKp~NIll~~~~~~kl~DFGla~~~~~~~-------- 162 (392)
+++... ...+++..+..++.|++.||.|||+.++ +|+||||+||+++.++.+||+|||+++......
T Consensus 85 ~L~~~l~~~~~~~~~~~~~~~i~~~l~~al~~lH~~~i-~h~dl~~~nili~~~~~~~l~df~~~~~~~~~~~~~~~~~~ 163 (256)
T cd08529 85 DLHKLLKMQRGRPLPEDQVWRFFIQILLGLAHLHSKKI-LHRDIKSLNLFLDAYDNVKIGDLGVAKLLSDNTNFANTIVG 163 (256)
T ss_pred cHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCc-ccCCCCcceEEEeCCCCEEEcccccceeccCccchhhcccc
Confidence 333322 3368899999999999999999999999 999999999999999999999999887543221
Q ss_pred ---------------cccccccceeeeeee
Q psy6828 163 ---------------YTGTDQHSFLQHTYH 177 (392)
Q Consensus 163 ---------------~~~~d~~s~g~~~~~ 177 (392)
....|+||+|+++|+
T Consensus 164 ~~~y~aPE~~~~~~~~~~~Di~slG~il~~ 193 (256)
T cd08529 164 TPYYLSPELCEDKPYNEKSDVWALGVVLYE 193 (256)
T ss_pred CccccCHHHhcCCCCCCccchHHHHHHHHH
Confidence 123488888888887
No 205
>cd06617 PKc_MKK3_6 Catalytic domain of the dual-specificity Protein Kinases, MAP kinase kinases 3 and 6. Protein kinases (PKs), MAP kinase kinase 3 (MKK3) and MKK6 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK3 and MKK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK3 and MKK6 are dual-specificity PKs
Probab=99.75 E-value=3.9e-18 Score=158.51 Aligned_cols=110 Identities=22% Similarity=0.399 Sum_probs=87.8
Q ss_pred ccCCCCCcceeEEEEEEEeecCcEEEEEEcCCCCh-hHHHHHHHHHHH---------------------------HH---
Q psy6828 48 SSNPDSDFRYSAIFTPIGIYKGRIFAIKRIPKKSV-DITRAMKKELKI---------------------------DI--- 96 (392)
Q Consensus 48 ~~~~lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~~-~~~~~~~~E~~~---------------------------~~--- 96 (392)
..+.+|+|+||.||++.+..+|+.||+|.++.... .....+..|... ++
T Consensus 5 ~~~~ig~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~~~~~~~~~~iv~~~~~~~~~~~~~lv~e~~~~ 84 (283)
T cd06617 5 VIEELGRGAYGVVDKMRHVPTGTIMAVKRIRATVNSQEQKRLLMDLDISMRSVDCPYTVTFYGALFREGDVWICMEVMDT 84 (283)
T ss_pred EEEEecccCCeEEEEEEEcCCCcEEEEEEEecCCCcHHHHHHHHHHHHHHHHcCCCCeeeeeEEEecCCcEEEEhhhhcc
Confidence 34569999999999999999999999999876532 222334444433 22
Q ss_pred -----hhc---CCcCCCHHHHHHHHHHHHHHHHHHhcC-CcccccCCCCCceEEcCCceEEEeccccchhc
Q psy6828 97 -----MEN---EDVKLDNMFIASLVADILRGMLYLHDS-ALRYHGNLKASNCLVDSRWVVKLADFGLTEFK 158 (392)
Q Consensus 97 -----l~~---~~~~l~~~~~~~i~~qi~~~l~ylH~~-~iiiHrDlKp~NIll~~~~~~kl~DFGla~~~ 158 (392)
+.. .+..+++..+..++.|++.||.|||++ ++ +||||||+||+++.++.+||+|||+++..
T Consensus 85 ~l~~~l~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~~i-~h~dlkp~nil~~~~~~~kl~dfg~~~~~ 154 (283)
T cd06617 85 SLDKFYKKVYDKGLTIPEDILGKIAVSIVKALEYLHSKLSV-IHRDVKPSNVLINRNGQVKLCDFGISGYL 154 (283)
T ss_pred cHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHhhcCCe-ecCCCCHHHEEECCCCCEEEeeccccccc
Confidence 211 223589999999999999999999997 88 99999999999999999999999998754
No 206
>KOG0614|consensus
Probab=99.75 E-value=2.7e-19 Score=169.07 Aligned_cols=114 Identities=24% Similarity=0.258 Sum_probs=94.2
Q ss_pred cCCCCCcceeEEEEEEEeecCcEEEEEEcCCCCh---hHHHHHHHHHHH-------------------------------
Q psy6828 49 SNPDSDFRYSAIFTPIGIYKGRIFAIKRIPKKSV---DITRAMKKELKI------------------------------- 94 (392)
Q Consensus 49 ~~~lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~~---~~~~~~~~E~~~------------------------------- 94 (392)
...||-|+||.|-+.........+|+|++++..+ .+.+.+..|..+
T Consensus 425 iaTLGvGgFGRVELV~~~~~~~~fAlKilkK~hIVdtkQqeHv~sEr~Im~~~~s~fIvrLYrTfrd~kyvYmLmEaClG 504 (732)
T KOG0614|consen 425 IATLGVGGFGRVELVKVNSQKATFALKILKKKHIVDTKQQEHVFSERNIMMECRSDFIVRLYRTFRDSKYVYMLMEACLG 504 (732)
T ss_pred hhhcccCccceEEEEEecccchHHHHHHHhHhhccchhHHHHHHhHHHHHHhcCchHHHHHHHHhccchhhhhhHHhhcC
Confidence 4569999999999987555555699999988765 445666677666
Q ss_pred ----HHhhcCCcCCCHHHHHHHHHHHHHHHHHHhcCCcccccCCCCCceEEcCCceEEEeccccchhccccccc
Q psy6828 95 ----DIMENEDVKLDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLVDSRWVVKLADFGLTEFKRDAEYT 164 (392)
Q Consensus 95 ----~~l~~~~~~l~~~~~~~i~~qi~~~l~ylH~~~iiiHrDlKp~NIll~~~~~~kl~DFGla~~~~~~~~~ 164 (392)
..++ ..+.|++..++.++..+++|+.|||++|| |.|||||+|++|+.+|-+||.|||+|+.+.....+
T Consensus 505 GElWTiLr-dRg~Fdd~tarF~~acv~EAfeYLH~k~i-IYRDLKPENllLd~~Gy~KLVDFGFAKki~~g~KT 576 (732)
T KOG0614|consen 505 GELWTILR-DRGSFDDYTARFYVACVLEAFEYLHRKGI-IYRDLKPENLLLDNRGYLKLVDFGFAKKIGSGRKT 576 (732)
T ss_pred chhhhhhh-hcCCcccchhhhhHHHHHHHHHHHHhcCc-eeccCChhheeeccCCceEEeehhhHHHhccCCce
Confidence 2222 23379999999999999999999999999 99999999999999999999999999998776644
No 207
>cd05068 PTKc_Frk_like Catalytic domain of Fyn-related kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Human Fyn-related kinase (Frk) and similar proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Frk and Srk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins a
Probab=99.75 E-value=6.9e-18 Score=155.09 Aligned_cols=110 Identities=21% Similarity=0.303 Sum_probs=89.3
Q ss_pred eeccCCCCCcceeEEEEEEEeecCcEEEEEEcCCCChhHHHHHHHHHHH-------------------------------
Q psy6828 46 SLSSNPDSDFRYSAIFTPIGIYKGRIFAIKRIPKKSVDITRAMKKELKI------------------------------- 94 (392)
Q Consensus 46 ~~~~~~lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~~~~~~~~~~E~~~------------------------------- 94 (392)
+...+.+|+|+||.||++.+. +++.||+|.++..... .+.+.+|+.+
T Consensus 8 ~~~~~~lg~g~~~~v~~~~~~-~~~~v~iK~~~~~~~~-~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~ 85 (261)
T cd05068 8 IQLLRKLGAGQFGEVWEGLWN-NTTPVAVKTLKPGTMD-PKDFLAEAQIMKKLRHPKLIQLYAVCTLEEPIYIVTELMKY 85 (261)
T ss_pred eeeEEEecccCCccEEEEEec-CCeEEEEEeeCCCccc-HHHHHHHHHHHHHCCCCCccceeEEEecCCCeeeeeecccC
Confidence 444578999999999999854 5678999999765432 3456677665
Q ss_pred ----HHhhc-CCcCCCHHHHHHHHHHHHHHHHHHhcCCcccccCCCCCceEEcCCceEEEeccccchhc
Q psy6828 95 ----DIMEN-EDVKLDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLVDSRWVVKLADFGLTEFK 158 (392)
Q Consensus 95 ----~~l~~-~~~~l~~~~~~~i~~qi~~~l~ylH~~~iiiHrDlKp~NIll~~~~~~kl~DFGla~~~ 158 (392)
+++.. ....+++..+..++.|++.||.|||++++ +||||||+||+++.++.+||+|||+++..
T Consensus 86 ~~L~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i-~H~dl~p~Nil~~~~~~~~l~dfg~~~~~ 153 (261)
T cd05068 86 GSLLEYLQGGAGRALKLPQLIDMAAQVASGMAYLEAQNY-IHRDLAARNVLVGENNICKVADFGLARVI 153 (261)
T ss_pred CcHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCe-eeccCCcceEEEcCCCCEEECCcceEEEc
Confidence 33322 22358999999999999999999999999 99999999999999999999999998754
No 208
>cd06658 STKc_PAK5 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 5. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 5, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK5 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK5 is mainly express
Probab=99.75 E-value=3.3e-18 Score=160.28 Aligned_cols=110 Identities=21% Similarity=0.336 Sum_probs=91.5
Q ss_pred ccCCCCCcceeEEEEEEEeecCcEEEEEEcCCCChhHHHHHHHHHHH--------------------------HHhhcC-
Q psy6828 48 SSNPDSDFRYSAIFTPIGIYKGRIFAIKRIPKKSVDITRAMKKELKI--------------------------DIMENE- 100 (392)
Q Consensus 48 ~~~~lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~~~~~~~~~~E~~~--------------------------~~l~~~- 100 (392)
....||+|+||.||++.+..+++.||||.+........+.+.+|+.. +++...
T Consensus 26 ~~~~lg~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~l~h~~ii~~~~~~~~~~~~~lv~e~~~~~~ 105 (292)
T cd06658 26 SFIKIGEGSTGIVCIATEKHTGKQVAVKKMDLRKQQRRELLFNEVVIMRDYHHENVVDMYNSYLVGDELWVVMEFLEGGA 105 (292)
T ss_pred hhhcccCCCCeEEEEEEECCCCCEEEEEEEecchHHHHHHHHHHHHHHHhCCCCcHHHHHHheecCCeEEEEEeCCCCCc
Confidence 34569999999999999988999999999876555555667777665 122211
Q ss_pred ------CcCCCHHHHHHHHHHHHHHHHHHhcCCcccccCCCCCceEEcCCceEEEeccccchhc
Q psy6828 101 ------DVKLDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLVDSRWVVKLADFGLTEFK 158 (392)
Q Consensus 101 ------~~~l~~~~~~~i~~qi~~~l~ylH~~~iiiHrDlKp~NIll~~~~~~kl~DFGla~~~ 158 (392)
...+++.++..++.|++.||.|||++++ +||||||+||++++++.+||+|||++...
T Consensus 106 L~~~~~~~~l~~~~~~~~~~qi~~~l~~LH~~~i-vH~dlkp~Nill~~~~~~kL~dfg~~~~~ 168 (292)
T cd06658 106 LTDIVTHTRMNEEQIATVCLSVLRALSYLHNQGV-IHRDIKSDSILLTSDGRIKLSDFGFCAQV 168 (292)
T ss_pred HHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCE-eecCCCHHHEEEcCCCCEEEccCcchhhc
Confidence 1258899999999999999999999999 99999999999999999999999998643
No 209
>cd05070 PTKc_Fyn_Yrk Catalytic domain of the Protein Tyrosine Kinases, Fyn and Yrk. Protein Tyrosine Kinase (PTK) family; Fyn and Yrk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fyn and Yrk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that r
Probab=99.75 E-value=9.7e-18 Score=154.01 Aligned_cols=129 Identities=22% Similarity=0.299 Sum_probs=100.7
Q ss_pred eeccCCCCCcceeEEEEEEEeecCcEEEEEEcCCCChhHHHHHHHHHHH-------------------------------
Q psy6828 46 SLSSNPDSDFRYSAIFTPIGIYKGRIFAIKRIPKKSVDITRAMKKELKI------------------------------- 94 (392)
Q Consensus 46 ~~~~~~lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~~~~~~~~~~E~~~------------------------------- 94 (392)
+...+.+|+|+||.||++.+. ++..+|+|.+...... .+.+.+|+.+
T Consensus 8 ~~~~~~ig~g~~~~v~~~~~~-~~~~~~~k~~~~~~~~-~~~~~~E~~~l~~l~~~~i~~~~~~~~~~~~~lv~e~~~~~ 85 (260)
T cd05070 8 LQLIKKLGNGQFGEVWMGTWN-GNTKVAVKTLKPGTMS-PESFLEEAQIMKKLRHDKLVQLYAVVSEEPIYIVTEYMSKG 85 (260)
T ss_pred hhhhheeccccCceEEEEEec-CCceeEEEEecCCCCC-HHHHHHHHHHHHhcCCCceEEEEeEECCCCcEEEEEecCCC
Confidence 455678999999999999754 6678999999765432 3457777766
Q ss_pred ---HHhhc-CCcCCCHHHHHHHHHHHHHHHHHHhcCCcccccCCCCCceEEcCCceEEEeccccchhccccc--------
Q psy6828 95 ---DIMEN-EDVKLDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLVDSRWVVKLADFGLTEFKRDAE-------- 162 (392)
Q Consensus 95 ---~~l~~-~~~~l~~~~~~~i~~qi~~~l~ylH~~~iiiHrDlKp~NIll~~~~~~kl~DFGla~~~~~~~-------- 162 (392)
+++.. ....+++.++..++.|++.||.|||++++ +||||||+||++++++.++|+|||++.......
T Consensus 86 ~L~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lH~~~i-~H~di~p~Nili~~~~~~~l~dfg~~~~~~~~~~~~~~~~~ 164 (260)
T cd05070 86 SLLDFLKDGEGRALKLPNLVDMAAQVAAGMAYIERMNY-IHRDLRSANILVGDGLVCKIADFGLARLIEDNEYTARQGAK 164 (260)
T ss_pred cHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCc-ccCCCccceEEEeCCceEEeCCceeeeeccCcccccccCCC
Confidence 23322 22358999999999999999999999999 999999999999999999999999987542211
Q ss_pred ----------------cccccccceeeeeee
Q psy6828 163 ----------------YTGTDQHSFLQHTYH 177 (392)
Q Consensus 163 ----------------~~~~d~~s~g~~~~~ 177 (392)
....|+||||+++|+
T Consensus 165 ~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~ 195 (260)
T cd05070 165 FPIKWTAPEAALYGRFTIKSDVWSFGILLTE 195 (260)
T ss_pred CCccccChHHHhcCCCcchhhhHHHHHHHHH
Confidence 013488888888887
No 210
>cd05077 PTK_Jak1_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Janus kinase 1. Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalytic dom
Probab=99.75 E-value=3.5e-18 Score=157.45 Aligned_cols=107 Identities=21% Similarity=0.243 Sum_probs=83.8
Q ss_pred CCCCcceeEEEEEEEee------------cCcEEEEEEcCCCChhHHHHHHHHHHH------------------------
Q psy6828 51 PDSDFRYSAIFTPIGIY------------KGRIFAIKRIPKKSVDITRAMKKELKI------------------------ 94 (392)
Q Consensus 51 ~lg~G~~g~V~~~~~~~------------~~~~vAiK~~~~~~~~~~~~~~~E~~~------------------------ 94 (392)
.||+|+||.||+|+... ....+++|.+..........+..|+.+
T Consensus 2 ~lg~G~~~~vy~~~~~~~~~~~~~~~~~~~~~~v~~k~~~~~~~~~~~~~~~~~~~l~~l~hp~iv~~~~~~~~~~~~~l 81 (262)
T cd05077 2 HLGRGTRTQIYAGILNYKDDDEDDGYSYEKEIKVILKVLDPSHRDISLAFFETASMMRQVSHKHIVLLYGVCVRDVENIM 81 (262)
T ss_pred ccccCCcceEeeeecccCCCccccccchhhceeEEEeecChhhhhHHHHHHHHHHHHHhCCCCCEeeEEEEEecCCCCEE
Confidence 58999999999997432 223689999876554444556666554
Q ss_pred -----------HHhhcCCcCCCHHHHHHHHHHHHHHHHHHhcCCcccccCCCCCceEEcCCce-------EEEeccccch
Q psy6828 95 -----------DIMENEDVKLDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLVDSRWV-------VKLADFGLTE 156 (392)
Q Consensus 95 -----------~~l~~~~~~l~~~~~~~i~~qi~~~l~ylH~~~iiiHrDlKp~NIll~~~~~-------~kl~DFGla~ 156 (392)
.++......+++..+..++.||+.||.|||++++ +||||||+|||++.++. +|++|||++.
T Consensus 82 v~e~~~~~~l~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~i-vH~dlkp~Nill~~~~~~~~~~~~~~l~d~g~~~ 160 (262)
T cd05077 82 VEEFVEFGPLDLFMHRKSDVLTTPWKFKVAKQLASALSYLEDKDL-VHGNVCTKNILLAREGIDGECGPFIKLSDPGIPI 160 (262)
T ss_pred EEecccCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhhhCCe-ECCCCCcccEEEecCCccCCCCceeEeCCCCCCc
Confidence 2233333468999999999999999999999999 99999999999987654 8999999886
Q ss_pred hc
Q psy6828 157 FK 158 (392)
Q Consensus 157 ~~ 158 (392)
..
T Consensus 161 ~~ 162 (262)
T cd05077 161 TV 162 (262)
T ss_pred cc
Confidence 43
No 211
>cd05040 PTKc_Ack_like Catalytic domain of the Protein Tyrosine Kinase, Activated Cdc42-associated kinase. Protein Tyrosine Kinase (PTK) family; Activated Cdc42-associated kinase (Ack) subfamily; catalytic (c) domain. Ack subfamily members include Ack1, thirty-eight-negative kinase 1 (Tnk1), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ack subfamily members are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal catalytic domain, an SH3 domain, a Cdc42-binding CRIB domain, and a proline-rich region. They are mainly expressed in brain and skeletal tissues and are involved in the regulation of cell adhesion and growth, receptor degradation, and axonal guidance. Ack1 is also associated with and
Probab=99.75 E-value=4.7e-18 Score=155.67 Aligned_cols=110 Identities=25% Similarity=0.286 Sum_probs=91.1
Q ss_pred CCCCCcceeEEEEEEEee-cCc--EEEEEEcCCCCh-hHHHHHHHHHHH-------------------------------
Q psy6828 50 NPDSDFRYSAIFTPIGIY-KGR--IFAIKRIPKKSV-DITRAMKKELKI------------------------------- 94 (392)
Q Consensus 50 ~~lg~G~~g~V~~~~~~~-~~~--~vAiK~~~~~~~-~~~~~~~~E~~~------------------------------- 94 (392)
+.+|+|+||.||++.+.. .++ .||||.+..... ...+.+.+|+..
T Consensus 1 ~~ig~g~~~~v~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~v~e~~~~~ 80 (257)
T cd05040 1 KKLGDGSFGVVRRGEWSTSGGKVIPVAVKCLKSDKLSDIMDDFLKEAAIMHSLDHENLIRLYGVVLTHPLMMVTELAPLG 80 (257)
T ss_pred CcCCccCcccEEeeeEecCCCCceEEEEeecCCcccHHHHHHHHHHHHHHhhcCCCCccceeEEEcCCeEEEEEEecCCC
Confidence 358999999999999765 333 699999988766 566778888776
Q ss_pred ---HHhhcCC-cCCCHHHHHHHHHHHHHHHHHHhcCCcccccCCCCCceEEcCCceEEEeccccchhccc
Q psy6828 95 ---DIMENED-VKLDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLVDSRWVVKLADFGLTEFKRD 160 (392)
Q Consensus 95 ---~~l~~~~-~~l~~~~~~~i~~qi~~~l~ylH~~~iiiHrDlKp~NIll~~~~~~kl~DFGla~~~~~ 160 (392)
+++.+.. ..+++..+..++.|++.||.|||++++ +||||||+||+++.++.+||+|||+++....
T Consensus 81 ~L~~~l~~~~~~~~~~~~~~~~~~qi~~~L~~lH~~~i-~H~di~p~nil~~~~~~~kl~dfg~~~~~~~ 149 (257)
T cd05040 81 SLLDRLRKDALGHFLISTLCDYAVQIANGMRYLESKRF-IHRDLAARNILLASDDKVKIGDFGLMRALPQ 149 (257)
T ss_pred cHHHHHHhcccccCcHHHHHHHHHHHHHHHHHHHhCCc-cccccCcccEEEecCCEEEeccccccccccc
Confidence 2222222 358899999999999999999999999 9999999999999999999999999876533
No 212
>cd05063 PTKc_EphR_A2 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A2. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA2 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored
Probab=99.75 E-value=3.7e-18 Score=157.41 Aligned_cols=111 Identities=25% Similarity=0.351 Sum_probs=91.9
Q ss_pred eccCCCCCcceeEEEEEEEeecCc---EEEEEEcCCCC-hhHHHHHHHHHHH----------------------------
Q psy6828 47 LSSNPDSDFRYSAIFTPIGIYKGR---IFAIKRIPKKS-VDITRAMKKELKI---------------------------- 94 (392)
Q Consensus 47 ~~~~~lg~G~~g~V~~~~~~~~~~---~vAiK~~~~~~-~~~~~~~~~E~~~---------------------------- 94 (392)
...+.+|+|+||.||++....+++ .+|+|.+.... ....+.+.+|+.+
T Consensus 8 ~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~ 87 (268)
T cd05063 8 TKQKVIGAGEFGEVFRGILKMPGRKEVAVAIKTLKPGYTEKQRQDFLSEASIMGQFSHHNIIRLEGVVTKFKPAMIITEY 87 (268)
T ss_pred eEeeEecCCCCccEEEEEEecCCCCceEEEEEeccccCCHHHHHHHHHHHHHHhcCCCCCeeEEEEEEccCCCcEEEEEc
Confidence 346679999999999999876665 79999997653 2344567777766
Q ss_pred -------HHhhcCCcCCCHHHHHHHHHHHHHHHHHHhcCCcccccCCCCCceEEcCCceEEEeccccchhc
Q psy6828 95 -------DIMENEDVKLDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLVDSRWVVKLADFGLTEFK 158 (392)
Q Consensus 95 -------~~l~~~~~~l~~~~~~~i~~qi~~~l~ylH~~~iiiHrDlKp~NIll~~~~~~kl~DFGla~~~ 158 (392)
+++......+++.++..++.|++.|+.|||+.++ +||||||+||+++.++.+|++|||++...
T Consensus 88 ~~~~~L~~~~~~~~~~~~~~~~~~~~~~l~~al~~lH~~~i-~H~dlkp~Nili~~~~~~kl~dfg~~~~~ 157 (268)
T cd05063 88 MENGALDKYLRDHDGEFSSYQLVGMLRGIAAGMKYLSDMNY-VHRDLAARNILVNSNLECKVSDFGLSRVL 157 (268)
T ss_pred CCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCe-eccccchhhEEEcCCCcEEECCCccceec
Confidence 3444344468999999999999999999999999 99999999999999999999999998754
No 213
>cd07849 STKc_ERK1_2_like Catalytic domain of Extracellular signal-Regulated Kinase 1 and 2-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Extracellular signal-regulated kinases 1 and 2 (ERK1/2) and Fus3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. This ERK1/2-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the mitogen-activated protein kinases (MAPKs) ERK1, ERK2, baker's yeast Fus3, and similar proteins. MAPK pathways are important mediators of cellular responses to extracellular signals. ERK1/2 activation is preferentially by mitogenic factors, differentiation stimuli, and cytokines, through a kinase cascade involving the MAPK kinases MEK1/2 and a MAPK kinase
Probab=99.75 E-value=2.5e-18 Score=164.29 Aligned_cols=114 Identities=27% Similarity=0.405 Sum_probs=91.2
Q ss_pred eeeeccCCCCCcceeEEEEEEEeecCcEEEEEEcCCCCh-hHHHHHHHHHHH----------------------------
Q psy6828 44 QVSLSSNPDSDFRYSAIFTPIGIYKGRIFAIKRIPKKSV-DITRAMKKELKI---------------------------- 94 (392)
Q Consensus 44 ~~~~~~~~lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~~-~~~~~~~~E~~~---------------------------- 94 (392)
..|...+.||+|+||.||++.+..+|+.||+|.+..... .....+.+|+.+
T Consensus 5 ~~y~i~~~lg~G~~g~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~ 84 (336)
T cd07849 5 PRYQNLSYIGEGAYGMVCSATHKPTGVKVAIKKISPFEHQTFCQRTLREIKILRRFKHENIIGILDIIRPPSFESFNDVY 84 (336)
T ss_pred cceEEEEEEEecCCeEEEEEEEcCCCCeEEEEEecccccchhHHHHHHHHHHHHhCCCCCcCchhheeecccccccceEE
Confidence 345567789999999999999999999999999864322 233445566554
Q ss_pred ---HHhhc------CCcCCCHHHHHHHHHHHHHHHHHHhcCCcccccCCCCCceEEcCCceEEEeccccchhc
Q psy6828 95 ---DIMEN------EDVKLDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLVDSRWVVKLADFGLTEFK 158 (392)
Q Consensus 95 ---~~l~~------~~~~l~~~~~~~i~~qi~~~l~ylH~~~iiiHrDlKp~NIll~~~~~~kl~DFGla~~~ 158 (392)
+++.. ....+++..+..++.|++.||.|||+.++ +||||||+||+++.++.+||+|||+++..
T Consensus 85 lv~e~~~~~l~~~~~~~~l~~~~~~~i~~ql~~aL~~LH~~~i-vH~dlkp~Nill~~~~~~kl~dfg~~~~~ 156 (336)
T cd07849 85 IVQELMETDLYKLIKTQHLSNDHIQYFLYQILRGLKYIHSANV-LHRDLKPSNLLLNTNCDLKICDFGLARIA 156 (336)
T ss_pred EEehhcccCHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCe-eccCCCHHHEEECCCCCEEECcccceeec
Confidence 11110 11258999999999999999999999999 99999999999999999999999998653
No 214
>cd05066 PTKc_EphR_A Catalytic domain of the Protein Tyrosine Kinases, Class EphA Ephrin Receptors. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; most class EphA receptors including EphA3, EphA4, EphA5, and EphA7, but excluding EphA1, EphA2 and EphA10; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. One exception is EphA4, which also binds ephrins-B2/B3. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellul
Probab=99.75 E-value=4.6e-18 Score=156.87 Aligned_cols=113 Identities=24% Similarity=0.317 Sum_probs=92.2
Q ss_pred eeccCCCCCcceeEEEEEEEeecCc---EEEEEEcCCCCh-hHHHHHHHHHHH---------------------------
Q psy6828 46 SLSSNPDSDFRYSAIFTPIGIYKGR---IFAIKRIPKKSV-DITRAMKKELKI--------------------------- 94 (392)
Q Consensus 46 ~~~~~~lg~G~~g~V~~~~~~~~~~---~vAiK~~~~~~~-~~~~~~~~E~~~--------------------------- 94 (392)
+...+.+|+|+||.||+|.+..++. .+|+|.++.... ...+.+.+|+.+
T Consensus 6 ~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 85 (267)
T cd05066 6 IKIEKVIGAGEFGEVCSGRLKLPGKREIPVAIKTLKAGYTEKQRRDFLSEASIMGQFDHPNIIHLEGVVTKSKPVMIVTE 85 (267)
T ss_pred eEeeeeecccCCCceEEEEEecCCCCceEEEEEECCCCCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEecCCccEEEEE
Confidence 3456789999999999999875554 799999975432 334567777766
Q ss_pred --------HHhhcCCcCCCHHHHHHHHHHHHHHHHHHhcCCcccccCCCCCceEEcCCceEEEeccccchhcc
Q psy6828 95 --------DIMENEDVKLDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLVDSRWVVKLADFGLTEFKR 159 (392)
Q Consensus 95 --------~~l~~~~~~l~~~~~~~i~~qi~~~l~ylH~~~iiiHrDlKp~NIll~~~~~~kl~DFGla~~~~ 159 (392)
+++......+++.++..++.|++.||.|||+.++ +||||||+||+++.++.++++|||++....
T Consensus 86 ~~~~~~L~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~i-~h~dlkp~nili~~~~~~~l~dfg~~~~~~ 157 (267)
T cd05066 86 YMENGSLDAFLRKHDGQFTVIQLVGMLRGIASGMKYLSDMGY-VHRDLAARNILVNSNLVCKVSDFGLSRVLE 157 (267)
T ss_pred cCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCE-eehhhchhcEEECCCCeEEeCCCCcccccc
Confidence 3443334468999999999999999999999999 999999999999999999999999987643
No 215
>cd05088 PTKc_Tie2 Catalytic domain of the Protein Tyrosine Kinase, Tie2. Protein Tyrosine Kinase (PTK) family; Tie2; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie2 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie2 is expressed mainly in endothelial cells and hematopoietic stem cells. It is also found in a subset of tumor-associated monocytes and eosinophils. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2. The binding of A
Probab=99.75 E-value=4.8e-18 Score=159.94 Aligned_cols=129 Identities=26% Similarity=0.344 Sum_probs=97.2
Q ss_pred ccCCCCCcceeEEEEEEEeecCcE--EEEEEcCCCC-hhHHHHHHHHHHH------------------------------
Q psy6828 48 SSNPDSDFRYSAIFTPIGIYKGRI--FAIKRIPKKS-VDITRAMKKELKI------------------------------ 94 (392)
Q Consensus 48 ~~~~lg~G~~g~V~~~~~~~~~~~--vAiK~~~~~~-~~~~~~~~~E~~~------------------------------ 94 (392)
..+.||+|+||.||+|.+..++.. +|+|.+.... ......+.+|+.+
T Consensus 11 ~~~~lg~G~~g~V~~a~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~Ei~~l~~l~~h~~iv~~~~~~~~~~~~~lv~e~~ 90 (303)
T cd05088 11 FQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLLGACEHRGYLYLAIEYA 90 (303)
T ss_pred eeeeecCCCCceEEEEEEccCCceeeEEEEEecccCCHHHHHHHHHHHHHHHHhcCCCCcceEEEEECCCCCceEEEEeC
Confidence 346799999999999998877764 5888776432 2334566677665
Q ss_pred ------HHhhcC---------------CcCCCHHHHHHHHHHHHHHHHHHhcCCcccccCCCCCceEEcCCceEEEeccc
Q psy6828 95 ------DIMENE---------------DVKLDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLVDSRWVVKLADFG 153 (392)
Q Consensus 95 ------~~l~~~---------------~~~l~~~~~~~i~~qi~~~l~ylH~~~iiiHrDlKp~NIll~~~~~~kl~DFG 153 (392)
+++... ...+++.++..++.|++.||.|||++++ +||||||+|||++.++.+||+|||
T Consensus 91 ~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~~LH~~gi-~H~dlkp~Nili~~~~~~kl~dfg 169 (303)
T cd05088 91 PHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQKQF-IHRDLAARNILVGENYVAKIADFG 169 (303)
T ss_pred CCCcHHHHHHhcccccccccccccccccCcCCHHHHHHHHHHHHHHHHHHHhCCc-cccccchheEEecCCCcEEeCccc
Confidence 222211 1247889999999999999999999999 999999999999999999999999
Q ss_pred cchhcccc----------------------ccccccccceeeeeee
Q psy6828 154 LTEFKRDA----------------------EYTGTDQHSFLQHTYH 177 (392)
Q Consensus 154 la~~~~~~----------------------~~~~~d~~s~g~~~~~ 177 (392)
+++..... .....|+||+|+++|+
T Consensus 170 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~e 215 (303)
T cd05088 170 LSRGQEVYVKKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWE 215 (303)
T ss_pred cCcccchhhhcccCCCcccccCHHHHhccCCcccccchhhhhHHHH
Confidence 98532110 0123488888888887
No 216
>cd06654 STKc_PAK1 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 1. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 1, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK1 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding
Probab=99.75 E-value=3.1e-18 Score=160.73 Aligned_cols=114 Identities=18% Similarity=0.304 Sum_probs=95.2
Q ss_pred eeeeccCCCCCcceeEEEEEEEeecCcEEEEEEcCCCChhHHHHHHHHHHH--------------------------HHh
Q psy6828 44 QVSLSSNPDSDFRYSAIFTPIGIYKGRIFAIKRIPKKSVDITRAMKKELKI--------------------------DIM 97 (392)
Q Consensus 44 ~~~~~~~~lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~~~~~~~~~~E~~~--------------------------~~l 97 (392)
..|...+.+|+|+||.||++.+..+++.||+|.+........+.+.+|+.+ +++
T Consensus 20 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~e~~~l~~~~h~~v~~~~~~~~~~~~~~lv~e~~ 99 (296)
T cd06654 20 KKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYLVGDELWVVMEYL 99 (296)
T ss_pred cceeeEEEecCCCCeEEEEEEECCCCcEEEEEEEecCCcchHHHHHHHHHHHHhCCCCCEeeEEEEEEeCCEEEEeeccc
Confidence 455566779999999999999989999999999987655555667777776 222
Q ss_pred hcC-------CcCCCHHHHHHHHHHHHHHHHHHhcCCcccccCCCCCceEEcCCceEEEeccccchhc
Q psy6828 98 ENE-------DVKLDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLVDSRWVVKLADFGLTEFK 158 (392)
Q Consensus 98 ~~~-------~~~l~~~~~~~i~~qi~~~l~ylH~~~iiiHrDlKp~NIll~~~~~~kl~DFGla~~~ 158 (392)
.++ +..+++.++..++.|++.||.|||+.++ +||||||+||+++.++.+||+|||++...
T Consensus 100 ~~~~L~~~~~~~~~~~~~~~~i~~ql~~aL~~LH~~gi-~H~dLkp~Nill~~~~~~kl~dfg~~~~~ 166 (296)
T cd06654 100 AGGSLTDVVTETCMDEGQIAAVCRECLQALEFLHSNQV-IHRDIKSDNILLGMDGSVKLTDFGFCAQI 166 (296)
T ss_pred CCCCHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHCCc-ccCCCCHHHEEEcCCCCEEECccccchhc
Confidence 211 1247899999999999999999999999 99999999999999999999999988754
No 217
>cd06611 STKc_SLK_like Catalytic domain of Ste20-like kinase-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), Ste20-like kinase (SLK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of the subfamily include SLK, STK10 (also called LOK for lymphocyte-oriented kinase), SmSLK (Schistosoma mansoni SLK), and related proteins. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It also plays a role in mediating actin reorganization. STK10 is responsible in regulating the CD28 responsive element in T cells, as well as leukocyte function associated anti
Probab=99.75 E-value=2.5e-18 Score=159.68 Aligned_cols=113 Identities=25% Similarity=0.268 Sum_probs=95.8
Q ss_pred eeeccCCCCCcceeEEEEEEEeecCcEEEEEEcCCCChhHHHHHHHHHHH------------------------------
Q psy6828 45 VSLSSNPDSDFRYSAIFTPIGIYKGRIFAIKRIPKKSVDITRAMKKELKI------------------------------ 94 (392)
Q Consensus 45 ~~~~~~~lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~~~~~~~~~~E~~~------------------------------ 94 (392)
.|...+.+|+|+||.||++.+..+++.||+|.+........+.+.+|+.+
T Consensus 6 ~~~i~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~ 85 (280)
T cd06611 6 IWEIIGELGDGAFGKVYKAQHKETGLFAAAKIIQIESEEELEDFMVEIDILSECKHPNIVGLYEAYFYENKLWILIEFCD 85 (280)
T ss_pred HHHHHHHhcCCCCceEEEEEEcCCCcEEEEEEEeeCCHHHHHHHHHHHHHHHhCCCCceeEEEEEEecCCeEEEEeeccC
Confidence 34556779999999999999988999999999987666666677788766
Q ss_pred -----HHhhcCCcCCCHHHHHHHHHHHHHHHHHHhcCCcccccCCCCCceEEcCCceEEEeccccchhc
Q psy6828 95 -----DIMENEDVKLDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLVDSRWVVKLADFGLTEFK 158 (392)
Q Consensus 95 -----~~l~~~~~~l~~~~~~~i~~qi~~~l~ylH~~~iiiHrDlKp~NIll~~~~~~kl~DFGla~~~ 158 (392)
+++......+++..+..++.|++.||.|||++++ +|+||||+||+++.++.++|+|||++...
T Consensus 86 ~~~L~~~~~~~~~~l~~~~~~~~~~ql~~~l~~lh~~~i-~h~dl~p~nili~~~~~~~l~d~g~~~~~ 153 (280)
T cd06611 86 GGALDSIMLELERGLTEPQIRYVCRQMLEALNFLHSHKV-IHRDLKAGNILLTLDGDVKLADFGVSAKN 153 (280)
T ss_pred CCcHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCc-ccCCCChhhEEECCCCCEEEccCccchhh
Confidence 2333333468999999999999999999999999 99999999999999999999999987643
No 218
>cd05059 PTKc_Tec_like Catalytic domain of Tec-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) subfamily; catalytic (c) domain. The Tec subfamily is composed of Tec, Btk, Bmx (Etk), Itk (Tsk, Emt), Rlk (Txk), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec kinases are cytoplasmic (or nonreceptor) tyr kinases (nRTKs) with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows
Probab=99.75 E-value=3.1e-18 Score=157.00 Aligned_cols=108 Identities=24% Similarity=0.356 Sum_probs=88.6
Q ss_pred ccCCCCCcceeEEEEEEEeecCcEEEEEEcCCCChhHHHHHHHHHHH---------------------------------
Q psy6828 48 SSNPDSDFRYSAIFTPIGIYKGRIFAIKRIPKKSVDITRAMKKELKI--------------------------------- 94 (392)
Q Consensus 48 ~~~~lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~~~~~~~~~~E~~~--------------------------------- 94 (392)
..+.+|+|+||.||++.+. ++..+|+|.+.+.... .+.+.+|+.+
T Consensus 8 ~~~~lg~G~~~~v~~~~~~-~~~~~~iK~~~~~~~~-~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~~~~~~ 85 (256)
T cd05059 8 FLKELGSGQFGVVHLGKWR-GKIDVAIKMIREGAMS-EDDFIEEAKVMMKLSHPNLVQLYGVCTKQRPIFIVTEYMANGC 85 (256)
T ss_pred hhhhhccCCCceEEEeEec-CCccEEEEEeccCCCC-HHHHHHHHHHHHhCCCCCEEEEEEEEcCCCceEEEEecCCCCC
Confidence 4567999999999999865 5678999998765432 2346667666
Q ss_pred --HHhhcCCcCCCHHHHHHHHHHHHHHHHHHhcCCcccccCCCCCceEEcCCceEEEeccccchhc
Q psy6828 95 --DIMENEDVKLDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLVDSRWVVKLADFGLTEFK 158 (392)
Q Consensus 95 --~~l~~~~~~l~~~~~~~i~~qi~~~l~ylH~~~iiiHrDlKp~NIll~~~~~~kl~DFGla~~~ 158 (392)
+++......+++..+..++.|++.||.|||++++ +||||||+||++++++.+||+|||+++..
T Consensus 86 L~~~l~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~i-~H~dl~p~ni~i~~~~~~kl~dfg~~~~~ 150 (256)
T cd05059 86 LLNYLRERKGKLGTEWLLDMCSDVCEAMEYLESNGF-IHRDLAARNCLVGEDNVVKVSDFGLARYV 150 (256)
T ss_pred HHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHCCc-ccccccHhhEEECCCCcEEECCcccceec
Confidence 3333333368999999999999999999999999 99999999999999999999999988754
No 219
>cd05038 PTKc_Jak_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases. Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; catalytic (c) domain (repeat 2). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Most Jaks are expressed in a wide variety of tissues, except for Jak3, which is expressed only in hematopoietic cells. Jaks are crucial for cytokine receptor signaling. They are activated by aut
Probab=99.75 E-value=6.1e-18 Score=157.07 Aligned_cols=111 Identities=22% Similarity=0.292 Sum_probs=91.4
Q ss_pred ccCCCCCcceeEEEEEEEe----ecCcEEEEEEcCCCChh-HHHHHHHHHHH----------------------------
Q psy6828 48 SSNPDSDFRYSAIFTPIGI----YKGRIFAIKRIPKKSVD-ITRAMKKELKI---------------------------- 94 (392)
Q Consensus 48 ~~~~lg~G~~g~V~~~~~~----~~~~~vAiK~~~~~~~~-~~~~~~~E~~~---------------------------- 94 (392)
..+.+|+|+||.||++... .+++.||+|.+...... ..+.+.+|+..
T Consensus 8 ~~~~ig~g~~~~v~~~~~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~ei~~l~~l~~~~i~~~~~~~~~~~~~~~~lv~ 87 (284)
T cd05038 8 FIKQLGEGHFGKVELCRYDPLGDNTGEQVAVKSLNHSGEEQHRSDFEREIEILRTLDHENIVKYKGVCEKPGGRSLRLIM 87 (284)
T ss_pred hheeeccCCCeeEEEeeecCCCCCCceEEEEEEeccccchHHHHHHHHHHHHHHhCCCCChheEEeeeecCCCCceEEEE
Confidence 3467999999999999854 34789999999866543 45678888766
Q ss_pred ---------HHhhcCCcCCCHHHHHHHHHHHHHHHHHHhcCCcccccCCCCCceEEcCCceEEEeccccchhcc
Q psy6828 95 ---------DIMENEDVKLDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLVDSRWVVKLADFGLTEFKR 159 (392)
Q Consensus 95 ---------~~l~~~~~~l~~~~~~~i~~qi~~~l~ylH~~~iiiHrDlKp~NIll~~~~~~kl~DFGla~~~~ 159 (392)
+++......+++..+..++.|++.||.|||++++ +||||||+||+++.++.++|+|||++....
T Consensus 88 e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~l~~aL~~lH~~~i-~H~dl~p~nil~~~~~~~~l~dfg~~~~~~ 160 (284)
T cd05038 88 EYLPSGSLRDYLQRHRDQINLKRLLLFSSQICKGMDYLGSQRY-IHRDLAARNILVESEDLVKISDFGLAKVLP 160 (284)
T ss_pred ecCCCCCHHHHHHhCccccCHHHHHHHHHHHHHHHHHHHhCCe-ecCCCCHHhEEEcCCCCEEEcccccccccc
Confidence 2232222248999999999999999999999999 999999999999999999999999987654
No 220
>cd07867 STKc_CDC2L6 Catalytic domain of Serine/Threonine Kinase, Cell Division Cycle 2-like 6. Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 6 (CDC2L6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L6 is also called CDK8-like and was previously referred to as CDK11. However, this is a confusing nomenclature as CDC2L6 is distinct from CDC2L1, which is represented by the two protein products from its gene, called CDK11(p110) and CDK11(p58), as well as
Probab=99.74 E-value=5.6e-18 Score=160.25 Aligned_cols=150 Identities=21% Similarity=0.309 Sum_probs=100.8
Q ss_pred ccCCCCCcceeEEEEEEEee--cCcEEEEEEcCCCChhHHHHHHHHHHH-------------------------------
Q psy6828 48 SSNPDSDFRYSAIFTPIGIY--KGRIFAIKRIPKKSVDITRAMKKELKI------------------------------- 94 (392)
Q Consensus 48 ~~~~lg~G~~g~V~~~~~~~--~~~~vAiK~~~~~~~~~~~~~~~E~~~------------------------------- 94 (392)
....||+|+||.||+|.+.. ++..||+|.+...... ..+.+|+.+
T Consensus 5 ~g~~lG~G~~g~Vy~~~~~~~~~~~~~a~k~~~~~~~~--~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~lv~e~~ 82 (317)
T cd07867 5 EGCKVGRGTYGHVYKAKRKDGKDEKEYALKQIEGTGIS--MSACREIALLRELKHPNVIALQKVFLSHSDRKVWLLFDYA 82 (317)
T ss_pred eceEeccCCCeeEEEEEecCCCccceEEEEEecCCCCc--HHHHHHHHHHHhCCCCCeeeEEEEEeccCCCeEEEEEeee
Confidence 34579999999999998654 5689999999765432 234556555
Q ss_pred -----HHhhc--------CCcCCCHHHHHHHHHHHHHHHHHHhcCCcccccCCCCCceEE----cCCceEEEeccccchh
Q psy6828 95 -----DIMEN--------EDVKLDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLV----DSRWVVKLADFGLTEF 157 (392)
Q Consensus 95 -----~~l~~--------~~~~l~~~~~~~i~~qi~~~l~ylH~~~iiiHrDlKp~NIll----~~~~~~kl~DFGla~~ 157 (392)
+++.. ....+++..+..++.|++.||.|||++++ +||||||+|||+ +.++.+||+|||+++.
T Consensus 83 ~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~i-vH~Dlkp~Nil~~~~~~~~~~~kl~DfG~a~~ 161 (317)
T cd07867 83 EHDLWHIIKFHRASKANKKPMQLPRSMVKSLLYQILDGIHYLHANWV-LHRDLKPANILVMGEGPERGRVKIADMGFARL 161 (317)
T ss_pred CCcHHHHHHhhhccccCCCCccCCHHHHHHHHHHHHHHHHHHHhCCE-EcCCCCHHHEEEccCCCCCCcEEEeeccceec
Confidence 11110 11248888999999999999999999999 999999999999 4567899999999986
Q ss_pred ccccccccccc-cceeeeeeeccCC-----CCcccccccccchhhhccC
Q psy6828 158 KRDAEYTGTDQ-HSFLQHTYHVNRA-----GSTESLHCKCDEALLFEML 200 (392)
Q Consensus 158 ~~~~~~~~~d~-~s~g~~~~~~~~~-----~~~~~~d~~~~~~lL~~~l 200 (392)
.........+. -..|...|.+|+. .++.+.|+|+.+.++..++
T Consensus 162 ~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~el~ 210 (317)
T cd07867 162 FNSPLKPLADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELL 210 (317)
T ss_pred cCCCcccccccCcceecccccCcHHhcCCCccCcHHHHHhHHHHHHHHH
Confidence 54322111111 1124444544441 1233445555555555544
No 221
>cd06613 STKc_MAP4K3_like Catalytic domain of Mitogen-activated protein kinase kinase kinase kinase-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily includes MAP4K3, MAP4K1, MAP4K2, MAP4K5, and related proteins. Vertebrate members contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activ
Probab=99.74 E-value=4.4e-18 Score=156.14 Aligned_cols=114 Identities=26% Similarity=0.363 Sum_probs=96.6
Q ss_pred eeeccCCCCCcceeEEEEEEEeecCcEEEEEEcCCCChhHHHHHHHHHHH------------------------------
Q psy6828 45 VSLSSNPDSDFRYSAIFTPIGIYKGRIFAIKRIPKKSVDITRAMKKELKI------------------------------ 94 (392)
Q Consensus 45 ~~~~~~~lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~~~~~~~~~~E~~~------------------------------ 94 (392)
.|...+.+|+|+||.||++.+..+++.+++|.+........+.+.+|+.+
T Consensus 4 ~~~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~l~~e~~~ 83 (262)
T cd06613 4 DYELIQRIGSGTYGDVYKARDIATGELVAIKVIKLEPGDDFEIIQQEISMLKECRHPNIVAYFGSYLRRDKLWIVMEYCG 83 (262)
T ss_pred ceEEEEEecCCCceEEEEeEecCCCCEEEEEEEEcCchhhHHHHHHHHHHHHhCCCCChhceEEEEEeCCEEEEEEeCCC
Confidence 34556779999999999999988999999999986655556677788776
Q ss_pred -----HHhhcCCcCCCHHHHHHHHHHHHHHHHHHhcCCcccccCCCCCceEEcCCceEEEeccccchhcc
Q psy6828 95 -----DIMENEDVKLDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLVDSRWVVKLADFGLTEFKR 159 (392)
Q Consensus 95 -----~~l~~~~~~l~~~~~~~i~~qi~~~l~ylH~~~iiiHrDlKp~NIll~~~~~~kl~DFGla~~~~ 159 (392)
+++......+++.++..++.|++.||.|||++++ +|+||||+||+++.++.+||+|||++....
T Consensus 84 ~~~l~~~~~~~~~~l~~~~~~~~~~ql~~~l~~lh~~~i-~h~dl~p~ni~i~~~~~~~l~d~g~~~~~~ 152 (262)
T cd06613 84 GGSLQDIYQVTRGPLSELQIAYVCRETLKGLAYLHETGK-IHRDIKGANILLTEDGDVKLADFGVSAQLT 152 (262)
T ss_pred CCcHHHHHHhhccCCCHHHHHHHHHHHHHHHHHHHhCCc-eecCCChhhEEECCCCCEEECccccchhhh
Confidence 3343333479999999999999999999999999 999999999999999999999999887543
No 222
>KOG1151|consensus
Probab=99.74 E-value=7.2e-19 Score=163.77 Aligned_cols=166 Identities=17% Similarity=0.221 Sum_probs=121.2
Q ss_pred cccccccceeeeccCCCCCcceeEEEEEEEeecCcEEEEEEcCCCCh-------hHHHHHHHHHHH--------------
Q psy6828 36 WFQNVHTSQVSLSSNPDSDFRYSAIFTPIGIYKGRIFAIKRIPKKSV-------DITRAMKKELKI-------------- 94 (392)
Q Consensus 36 ~~~~~~~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~~-------~~~~~~~~E~~~-------------- 94 (392)
|.+......+|+....||+|||+.||++.+....+.||+|+-..++- .-.+...+|..|
T Consensus 455 FkDHptLn~RYLlLhLLGrGGFSEVyKAFDl~EqRYvAvKIHqlNK~WrdEKKeNYhKHAcREyrIHKeLDHpRIVKlYD 534 (775)
T KOG1151|consen 455 FKDHPTLNDRYLLLHLLGRGGFSEVYKAFDLTEQRYVAVKIHQLNKNWRDEKKENYHKHACREYRIHKELDHPRIVKLYD 534 (775)
T ss_pred hccCcchHHHHHHHHHhccccHHHHHHhcccchhheeeEeeehhccchhhHhhhhHHHHHHHHHhhhhccCcceeeeeee
Confidence 34445567889999999999999999999999999999998653321 122345556555
Q ss_pred ---------------------HHhhcCCcCCCHHHHHHHHHHHHHHHHHHhcCCc-ccccCCCCCceEEcC---CceEEE
Q psy6828 95 ---------------------DIMENEDVKLDNMFIASLVADILRGMLYLHDSAL-RYHGNLKASNCLVDS---RWVVKL 149 (392)
Q Consensus 95 ---------------------~~l~~~~~~l~~~~~~~i~~qi~~~l~ylH~~~i-iiHrDlKp~NIll~~---~~~~kl 149 (392)
+|+-.....+++++++.|+-||+.||.||.+... |||-||||.||||-+ .|.+||
T Consensus 535 yfslDtdsFCTVLEYceGNDLDFYLKQhklmSEKEARSIiMQiVnAL~YLNEikpPIIHYDLKPgNILLv~GtacGeIKI 614 (775)
T KOG1151|consen 535 YFSLDTDSFCTVLEYCEGNDLDFYLKQHKLMSEKEARSIIMQIVNALKYLNEIKPPIIHYDLKPGNILLVNGTACGEIKI 614 (775)
T ss_pred eeeeccccceeeeeecCCCchhHHHHhhhhhhHHHHHHHHHHHHHHHHHHhccCCCeeeeccCCccEEEecCcccceeEe
Confidence 2222223368999999999999999999997543 699999999999954 378999
Q ss_pred eccccchhcccccccc---ccccceeeeeee--ccC--------CCCcccccccccchhhhccCC
Q psy6828 150 ADFGLTEFKRDAEYTG---TDQHSFLQHTYH--VNR--------AGSTESLHCKCDEALLFEMLP 201 (392)
Q Consensus 150 ~DFGla~~~~~~~~~~---~d~~s~g~~~~~--~~~--------~~~~~~~d~~~~~~lL~~~lp 201 (392)
+|||+++.+.+..... .+..|-|+-.|+ .|+ ..-+.++|.|+.+.++++.+.
T Consensus 615 TDFGLSKIMdddSy~~vdGmeLTSQgAGTYWYLPPEcFvVgkePPKIsnKVDVWSvGVIFyQClY 679 (775)
T KOG1151|consen 615 TDFGLSKIMDDDSYNSVDGMELTSQGAGTYWYLPPECFVVGKEPPKISNKVDVWSVGVIFYQCLY 679 (775)
T ss_pred eecchhhhccCCccCcccceeeecccCceeeecCcceeecCCCCCccccceeeEeeehhhhhhhc
Confidence 9999999987766543 245555555554 333 112346778888888877664
No 223
>cd05075 PTKc_Axl Catalytic domain of the Protein Tyrosine Kinase, Axl. Protein Tyrosine Kinase (PTK) family; Axl; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl is widely expressed in a variety of organs and cells including epithelial, mesenchymal, hematopoietic, as well as non-transfor
Probab=99.74 E-value=7.8e-18 Score=155.53 Aligned_cols=109 Identities=20% Similarity=0.281 Sum_probs=87.1
Q ss_pred cCCCCCcceeEEEEEEEeecCc--EEEEEEcCCCC--hhHHHHHHHHHHH------------------------------
Q psy6828 49 SNPDSDFRYSAIFTPIGIYKGR--IFAIKRIPKKS--VDITRAMKKELKI------------------------------ 94 (392)
Q Consensus 49 ~~~lg~G~~g~V~~~~~~~~~~--~vAiK~~~~~~--~~~~~~~~~E~~~------------------------------ 94 (392)
.+.||+|+||.||+|....+++ .||+|.++... ....+.+.+|..+
T Consensus 4 ~~~ig~G~~g~V~~~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~~~ 83 (272)
T cd05075 4 GKTLGEGEFGSVMEGQLNQDDSILKVAVKTMKIAICTRSEMEDFLSEAVCMKEFDHPNVMRLIGVCLQTVESEGYPSPVV 83 (272)
T ss_pred ccccCcccCceEEEeEEccCCCeeeEEEEecccCcCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEccCCcccCCCCcEE
Confidence 4679999999999999877765 69999987542 2334556666655
Q ss_pred --HHhhc--------------CCcCCCHHHHHHHHHHHHHHHHHHhcCCcccccCCCCCceEEcCCceEEEeccccchhc
Q psy6828 95 --DIMEN--------------EDVKLDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLVDSRWVVKLADFGLTEFK 158 (392)
Q Consensus 95 --~~l~~--------------~~~~l~~~~~~~i~~qi~~~l~ylH~~~iiiHrDlKp~NIll~~~~~~kl~DFGla~~~ 158 (392)
+|+.. ....+++..+..++.|++.||.|||++++ +||||||+|||++.++.+||+|||+++..
T Consensus 84 v~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i-~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~ 162 (272)
T cd05075 84 ILPFMKHGDLHSFLLYSRLGDCPQYLPTQMLVKFMTDIASGMEYLSSKSF-IHRDLAARNCMLNENMNVCVADFGLSKKI 162 (272)
T ss_pred EEEeCCCCcHHHHHHHhcccCCcccCCHHHHHHHHHHHHHHHHHHHHCCe-eccccchhheEEcCCCCEEECCCCccccc
Confidence 11111 11237888999999999999999999999 99999999999999999999999998864
No 224
>cd07845 STKc_CDK10 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 10. Serine/Threonine Kinases (STKs), Cyclin-dependent protein Kinase 10 (CDK10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK10, also called PISSLRE, is essential for cell growth and proliferation, and acts through the G2/M phase of the cell cycle. CDK10 has also been identified as an important factor in endocrine therapy resistance in breast cancer. CDK10 silencing
Probab=99.74 E-value=2.3e-18 Score=162.45 Aligned_cols=113 Identities=25% Similarity=0.425 Sum_probs=90.1
Q ss_pred eeccCCCCCcceeEEEEEEEeecCcEEEEEEcCCCCh--hHHHHHHHHHHH-----------------------------
Q psy6828 46 SLSSNPDSDFRYSAIFTPIGIYKGRIFAIKRIPKKSV--DITRAMKKELKI----------------------------- 94 (392)
Q Consensus 46 ~~~~~~lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~~--~~~~~~~~E~~~----------------------------- 94 (392)
|...+.||+|+||.||++.+..+|+.||+|.++.... .......+|+.+
T Consensus 9 y~~~~~ig~g~~~~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~lv~e 88 (309)
T cd07845 9 FEKLNRIGEGTYGIVYRARDTTSGEIVALKKVRMDNERDGIPISSLREITLLLNLRHPNIVELKEVVVGKHLDSIFLVME 88 (309)
T ss_pred eeEeeeeeecCCEEEEEEEECCCCcEEEEEEEEeccCCCCCcchhhHHHHHHHhCCCCCCcceEEEEecCCCCeEEEEEe
Confidence 4556679999999999999999999999999864322 111223345444
Q ss_pred -------HHhhcCCcCCCHHHHHHHHHHHHHHHHHHhcCCcccccCCCCCceEEcCCceEEEeccccchhcc
Q psy6828 95 -------DIMENEDVKLDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLVDSRWVVKLADFGLTEFKR 159 (392)
Q Consensus 95 -------~~l~~~~~~l~~~~~~~i~~qi~~~l~ylH~~~iiiHrDlKp~NIll~~~~~~kl~DFGla~~~~ 159 (392)
+++......+++.++..++.|++.||.|||+.++ +||||||+||+++.++.+||+|||++....
T Consensus 89 ~~~~~l~~~l~~~~~~l~~~~~~~~~~qi~~~l~~lH~~~i-~H~dl~p~nil~~~~~~~kL~dfg~~~~~~ 159 (309)
T cd07845 89 YCEQDLASLLDNMPTPFSESQVKCLMLQLLRGLQYLHENFI-IHRDLKVSNLLLTDKGCLKIADFGLARTYG 159 (309)
T ss_pred cCCCCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHhCCe-ecCCCCHHHEEECCCCCEEECccceeeecC
Confidence 2222223468999999999999999999999999 999999999999999999999999987643
No 225
>PRK13184 pknD serine/threonine-protein kinase; Reviewed
Probab=99.74 E-value=4.3e-18 Score=177.09 Aligned_cols=113 Identities=19% Similarity=0.196 Sum_probs=91.3
Q ss_pred eeeccCCCCCcceeEEEEEEEeecCcEEEEEEcCCCCh---hHHHHHHHHHHH---------------------------
Q psy6828 45 VSLSSNPDSDFRYSAIFTPIGIYKGRIFAIKRIPKKSV---DITRAMKKELKI--------------------------- 94 (392)
Q Consensus 45 ~~~~~~~lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~~---~~~~~~~~E~~~--------------------------- 94 (392)
.|...+.||+|+||.||+|.+..+++.||+|+++.... ...+++.+|+.+
T Consensus 3 rYeIi~~LGkGgfG~VYlA~d~~tg~~VAIK~I~~~l~~~e~~~~rflrEi~ILs~L~HPNIVkl~~v~~d~~~lyLVME 82 (932)
T PRK13184 3 RYDIIRLIGKGGMGEVYLAYDPVCSRRVALKKIREDLSENPLLKKRFLREAKIAADLIHPGIVPVYSICSDGDPVYYTMP 82 (932)
T ss_pred CeEEEEEEecCCCEEEEEEEECCCCcEEEEEEECcccccCHHHHHHHHHHHHHHHhCCCcCcCeEEEEEeeCCEEEEEEE
Confidence 35556789999999999999999999999999975422 334567888777
Q ss_pred --------HHhhcC----------CcCCCHHHHHHHHHHHHHHHHHHhcCCcccccCCCCCceEEcCCceEEEeccccch
Q psy6828 95 --------DIMENE----------DVKLDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLVDSRWVVKLADFGLTE 156 (392)
Q Consensus 95 --------~~l~~~----------~~~l~~~~~~~i~~qi~~~l~ylH~~~iiiHrDlKp~NIll~~~~~~kl~DFGla~ 156 (392)
+++.+. ...++...+..++.|++.||.|||++++ +||||||+|||++.++.+||+|||+++
T Consensus 83 Y~eGGSL~~lL~s~~~~~~l~e~~~~~lsv~~iL~I~~QIa~AL~yLHs~GI-IHRDLKPeNILLd~dg~vKLiDFGLAk 161 (932)
T PRK13184 83 YIEGYTLKSLLKSVWQKESLSKELAEKTSVGAFLSIFHKICATIEYVHSKGV-LHRDLKPDNILLGLFGEVVILDWGAAI 161 (932)
T ss_pred cCCCCCHHHHHHHhhhccccchhhhcccCHHHHHHHHHHHHHHHHHHHHCCc-cccCCchheEEEcCCCCEEEEecCcce
Confidence 222110 1134556778899999999999999999 999999999999999999999999987
Q ss_pred hc
Q psy6828 157 FK 158 (392)
Q Consensus 157 ~~ 158 (392)
..
T Consensus 162 ~i 163 (932)
T PRK13184 162 FK 163 (932)
T ss_pred ec
Confidence 65
No 226
>cd06652 STKc_MEKK2 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 2. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 2 (MEKK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK2 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK2 also activates ERK1/2, c-Jun N-terminal kinase (JNK) and p38 through their re
Probab=99.74 E-value=3.9e-18 Score=157.12 Aligned_cols=109 Identities=24% Similarity=0.330 Sum_probs=89.4
Q ss_pred ccCCCCCcceeEEEEEEEeecCcEEEEEEcCCCC-----hhHHHHHHHHHHH----------------------------
Q psy6828 48 SSNPDSDFRYSAIFTPIGIYKGRIFAIKRIPKKS-----VDITRAMKKELKI---------------------------- 94 (392)
Q Consensus 48 ~~~~lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~-----~~~~~~~~~E~~~---------------------------- 94 (392)
..+.+|+|+||.||.+.+..+++.||||.+.... ....+.+.+|+.+
T Consensus 6 ~~~~l~~g~~g~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~~v~ 85 (265)
T cd06652 6 LGKLLGQGAFGRVYLCYDADTGRELAVKQVQFDPESPETSKEVNALECEIQLLKNLLHERIVQYYGCLRDPMERTLSIFM 85 (265)
T ss_pred EeeEEecCCceEEEEEEEcCCCcEEEEEEeecCcCCcccHHHHHHHHHHHHHHHhcCCCCeeeEEeEeccCCCceEEEEE
Confidence 3567999999999999999999999999885321 1334566777666
Q ss_pred ---------HHhhcCCcCCCHHHHHHHHHHHHHHHHHHhcCCcccccCCCCCceEEcCCceEEEeccccchhc
Q psy6828 95 ---------DIMENEDVKLDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLVDSRWVVKLADFGLTEFK 158 (392)
Q Consensus 95 ---------~~l~~~~~~l~~~~~~~i~~qi~~~l~ylH~~~iiiHrDlKp~NIll~~~~~~kl~DFGla~~~ 158 (392)
+++.+. ..+++..+..++.|++.||.|||++++ +|+||||+||+++.++.+||+|||+++..
T Consensus 86 e~~~~~~L~~~l~~~-~~~~~~~~~~~~~~l~~~l~~lH~~~i-~H~dl~p~nil~~~~~~~~l~Dfg~~~~~ 156 (265)
T cd06652 86 EHMPGGSIKDQLKSY-GALTENVTRKYTRQILEGVSYLHSNMI-VHRDIKGANILRDSVGNVKLGDFGASKRL 156 (265)
T ss_pred EecCCCcHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHhCCE-ecCCCCHHHEEecCCCCEEECcCcccccc
Confidence 222222 247888899999999999999999999 99999999999999999999999998754
No 227
>cd00192 PTKc Catalytic domain of Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family, catalytic domain. This PTKc family is part of a larger superfamily that includes the catalytic domains of protein serine/threonine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. They can be classified into receptor and non-receptor tyr kinases. PTKs play important roles in many cellular processes including, lymphocyte activation, epithelium growth and maintenance, metabolism control, organogenesis regulation, survival, proliferation, differentiation, migration, adhesion, motility, and morphogenesis. Receptor tyr kinases (RTKs) are integral membrane proteins which contain an extracellular ligand-binding region, a transmembrane segment, and an intracellular tyr kinase domain. RTKs are usually activated through ligan
Probab=99.74 E-value=1.4e-17 Score=152.31 Aligned_cols=110 Identities=25% Similarity=0.374 Sum_probs=93.4
Q ss_pred CCCCCcceeEEEEEEEeec---CcEEEEEEcCCCChh-HHHHHHHHHHH-------------------------------
Q psy6828 50 NPDSDFRYSAIFTPIGIYK---GRIFAIKRIPKKSVD-ITRAMKKELKI------------------------------- 94 (392)
Q Consensus 50 ~~lg~G~~g~V~~~~~~~~---~~~vAiK~~~~~~~~-~~~~~~~E~~~------------------------------- 94 (392)
+.+|+|+||.||++.+... +..|++|.++..... ..+.+.+|+..
T Consensus 1 ~~ig~g~~g~v~~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~e~~~~ 80 (262)
T cd00192 1 KKLGEGAFGEVYKGKLKGKDGKTTEVAVKTLKEDASEEERKDFLKEARVMKKLGHPNVVRLLGVCTEEEPLYLVLEYMEG 80 (262)
T ss_pred CccccCCceEEEEEEEecCCCCCceEEeEeeccccchhHHHHHHHHHHHHhhcCCCChheeeeeecCCCceEEEEEeccC
Confidence 3689999999999998866 889999999866443 25667777766
Q ss_pred ----HHhhcC--------CcCCCHHHHHHHHHHHHHHHHHHhcCCcccccCCCCCceEEcCCceEEEeccccchhccc
Q psy6828 95 ----DIMENE--------DVKLDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLVDSRWVVKLADFGLTEFKRD 160 (392)
Q Consensus 95 ----~~l~~~--------~~~l~~~~~~~i~~qi~~~l~ylH~~~iiiHrDlKp~NIll~~~~~~kl~DFGla~~~~~ 160 (392)
+++... ...+++.++..++.|++.||.|||++++ +||||||+||+++.++.+||+|||.+.....
T Consensus 81 ~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lH~~~i-~H~di~p~nili~~~~~~~l~dfg~~~~~~~ 157 (262)
T cd00192 81 GDLLDYLRKSRPVFPSPEKSTLSLKDLLSFAIQIAKGMEYLASKKF-VHRDLAARNCLVGEDLVVKISDFGLSRDVYD 157 (262)
T ss_pred CcHHHHHhhccccccccccccCCHHHHHHHHHHHHHHHHHHHcCCc-ccCccCcceEEECCCCcEEEccccccccccc
Confidence 444443 3578999999999999999999999999 9999999999999999999999999986544
No 228
>cd05085 PTKc_Fer Catalytic domain of the Protein Tyrosine Kinase, Fer. Protein Tyrosine Kinase (PTK) family; Fer kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fer kinase is a member of the Fes subfamily of proteins which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. Fer kinase is expressed in a wide variety of tissues, and is found to reside in both the cytoplasm and the nucleus. It plays important roles in neuronal polarization and neurite development, cytoskeletal reorganization, cell migration, growth factor signaling, and the regulation of cell-c
Probab=99.74 E-value=6.6e-18 Score=154.02 Aligned_cols=105 Identities=22% Similarity=0.342 Sum_probs=87.7
Q ss_pred CCCCcceeEEEEEEEeecCcEEEEEEcCCCCh-hHHHHHHHHHHH-----------------------------------
Q psy6828 51 PDSDFRYSAIFTPIGIYKGRIFAIKRIPKKSV-DITRAMKKELKI----------------------------------- 94 (392)
Q Consensus 51 ~lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~~-~~~~~~~~E~~~----------------------------------- 94 (392)
.||+|+||.||++.. .+++.||+|.++.... .....+.+|+.+
T Consensus 2 ~ig~g~~g~vy~~~~-~~~~~~a~K~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~ 80 (250)
T cd05085 2 LLGKGNFGEVFKGTL-KDKTPVAVKTCKEDLPQELKIKFLSEARILKQYDHPNIVKLIGVCTQRQPIYIVMELVPGGDFL 80 (250)
T ss_pred ccCCCCCceEEEEEe-cCCcEEEEEecCCcCCHHHHHHHHHHHHHHHhCCCCCcCeEEEEEecCCccEEEEECCCCCcHH
Confidence 589999999999984 4788999999876543 333457777776
Q ss_pred HHhhcCCcCCCHHHHHHHHHHHHHHHHHHhcCCcccccCCCCCceEEcCCceEEEeccccchh
Q psy6828 95 DIMENEDVKLDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLVDSRWVVKLADFGLTEF 157 (392)
Q Consensus 95 ~~l~~~~~~l~~~~~~~i~~qi~~~l~ylH~~~iiiHrDlKp~NIll~~~~~~kl~DFGla~~ 157 (392)
+++......+++..+..++.|++.+|.|+|++++ +||||||+||+++.++.+||+|||++..
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~~-~H~dl~p~nili~~~~~~~l~d~g~~~~ 142 (250)
T cd05085 81 SFLRKKKDELKTKQLVKFALDAAAGMAYLESKNC-IHRDLAARNCLVGENNVLKISDFGMSRQ 142 (250)
T ss_pred HHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCe-eecccChheEEEcCCCeEEECCCcccee
Confidence 3333333468899999999999999999999999 9999999999999999999999999864
No 229
>cd05577 STKc_GRK Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. GRKs contain a central catalytic domain, flanked by N- and C-terminal extensions. The N-terminus contains an RGS (regulator of
Probab=99.74 E-value=5.2e-18 Score=157.43 Aligned_cols=125 Identities=20% Similarity=0.216 Sum_probs=99.3
Q ss_pred CCCcceeEEEEEEEeecCcEEEEEEcCCCCh---hHHHHHHHHHHH----------------------------------
Q psy6828 52 DSDFRYSAIFTPIGIYKGRIFAIKRIPKKSV---DITRAMKKELKI---------------------------------- 94 (392)
Q Consensus 52 lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~~---~~~~~~~~E~~~---------------------------------- 94 (392)
||+|+||+||++.+..+|+.||+|.+.+... ...+.+.+|+.+
T Consensus 1 lg~g~~g~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L 80 (277)
T cd05577 1 LGKGGFGEVCACQVKATGKMYACKKLDKKRLKKRKGEQMALNEKKILEKVSSRFIVSLAYAFETKDDLCLVMTLMNGGDL 80 (277)
T ss_pred CCCCCceeEEEEEEcCCCcEEEEEEEehhhhhhhhhhHHHHHHHHHHHhCCCCCEeeeeeEEecCCeEEEEEecCCCCcH
Confidence 6899999999999999999999999976433 223345566665
Q ss_pred -HHhhc-CCcCCCHHHHHHHHHHHHHHHHHHhcCCcccccCCCCCceEEcCCceEEEeccccchhccccc----------
Q psy6828 95 -DIMEN-EDVKLDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLVDSRWVVKLADFGLTEFKRDAE---------- 162 (392)
Q Consensus 95 -~~l~~-~~~~l~~~~~~~i~~qi~~~l~ylH~~~iiiHrDlKp~NIll~~~~~~kl~DFGla~~~~~~~---------- 162 (392)
+++.. ....+++.++..++.|++.||.|||++++ +||||||+||++++++.+||+|||++.......
T Consensus 81 ~~~l~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~~i-~H~di~p~Nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~ 159 (277)
T cd05577 81 KYHIYNVGEPGFPEARAIFYAAQIICGLEHLHQRRI-VYRDLKPENVLLDDHGNVRISDLGLAVELKGGKKIKGRAGTPG 159 (277)
T ss_pred HHHHHHcCcCCCCHHHHHHHHHHHHHHHHHHHhCCc-ccCCCCHHHEEECCCCCEEEccCcchhhhccCCccccccCCCC
Confidence 22222 22358999999999999999999999999 999999999999999999999999887543110
Q ss_pred ------------cccccccceeeeeee
Q psy6828 163 ------------YTGTDQHSFLQHTYH 177 (392)
Q Consensus 163 ------------~~~~d~~s~g~~~~~ 177 (392)
....|+||+|+++|+
T Consensus 160 y~~PE~~~~~~~~~~~Di~slG~il~~ 186 (277)
T cd05577 160 YMAPEVLQGEVYDFSVDWFALGCTLYE 186 (277)
T ss_pred cCCHHHhcCCCCCchhhhHHHHHHHHH
Confidence 113499999999888
No 230
>KOG1094|consensus
Probab=99.74 E-value=2.7e-18 Score=164.74 Aligned_cols=161 Identities=20% Similarity=0.269 Sum_probs=123.5
Q ss_pred ccccceeeeccccce--eeeeeccccc-----cccceeeeccCCCCCcceeEEEEEEEeecCcEEEEEEcCCCCh-hHHH
Q psy6828 15 LRQSTVVKLVDNHKL--FDWFCSWFQN-----VHTSQVSLSSNPDSDFRYSAIFTPIGIYKGRIFAIKRIPKKSV-DITR 86 (392)
Q Consensus 15 ~~E~~~l~~l~hpni--v~~~~~~~~~-----~~~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~~-~~~~ 86 (392)
..++.-+....|+|- +.|...-.-. ...++.-+..+.||+|.||.|.+|. ...+.+||+|.++...- ..++
T Consensus 502 ~a~iv~~Q~vs~~Nss~v~y~~~~~~k~~al~EfPRs~L~~~ekiGeGqFGEVhLCe-veg~lkVAVK~Lr~~a~~~~r~ 580 (807)
T KOG1094|consen 502 EADIVTLQGVSGGNSSAVPYLPPGVGKGPALVEFPRSRLRFKEKIGEGQFGEVHLCE-VEGPLKVAVKILRPDATKNARN 580 (807)
T ss_pred ccccccccCCCCCccccccccCcccccCcchhhcchhheehhhhhcCcccceeEEEE-ecCceEEEEeecCcccchhHHH
Confidence 345666777888884 4443222000 1134555668899999999999997 44479999999987654 5568
Q ss_pred HHHHHHHH--------------------------HHhhcCCcC----------CCHHHHHHHHHHHHHHHHHHhcCCccc
Q psy6828 87 AMKKELKI--------------------------DIMENEDVK----------LDNMFIASLVADILRGMLYLHDSALRY 130 (392)
Q Consensus 87 ~~~~E~~~--------------------------~~l~~~~~~----------l~~~~~~~i~~qi~~~l~ylH~~~iii 130 (392)
.|.+|+.+ +|+++++++ +.......++.||++|+.||.+.++ +
T Consensus 581 ~F~kEIkiLsqLkhPNIveLvGVC~~DePicmI~EYmEnGDLnqFl~aheapt~~t~~~vsi~tqiasgmaYLes~nf-V 659 (807)
T KOG1094|consen 581 DFLKEIKILSRLKHPNIVELLGVCVQDDPLCMITEYMENGDLNQFLSAHELPTAETAPGVSICTQIASGMAYLESLNF-V 659 (807)
T ss_pred HHHHHHHHHhccCCCCeeEEEeeeecCCchHHHHHHHhcCcHHHHHHhccCcccccchhHHHHHHHHHHHHHHHhhch-h
Confidence 89999998 777775541 2445567899999999999999999 9
Q ss_pred ccCCCCCceEEcCCceEEEeccccchhccccc-------------------------cccccccceeeeeee
Q psy6828 131 HGNLKASNCLVDSRWVVKLADFGLTEFKRDAE-------------------------YTGTDQHSFLQHTYH 177 (392)
Q Consensus 131 HrDlKp~NIll~~~~~~kl~DFGla~~~~~~~-------------------------~~~~d~~s~g~~~~~ 177 (392)
||||.+.|+|++.++++||+|||.++.+-... .+.+|+|+||+++||
T Consensus 660 Hrd~a~rNcLv~~e~~iKiadfgmsR~lysg~yy~vqgr~vlpiRwmawEsillgkFttaSDvWafgvTlwE 731 (807)
T KOG1094|consen 660 HRDLATRNCLVDGEFTIKIADFGMSRNLYSGDYYRVQGRAVLPIRWMAWESILLGKFTTASDVWAFGVTLWE 731 (807)
T ss_pred hccccccceeecCcccEEecCcccccccccCCceeeecceeeeeeehhHHHHHhccccchhhhhhhHHHHHH
Confidence 99999999999999999999999999432222 234599999999999
No 231
>PRK09188 serine/threonine protein kinase; Provisional
Probab=99.74 E-value=4.7e-18 Score=161.89 Aligned_cols=118 Identities=17% Similarity=0.113 Sum_probs=90.4
Q ss_pred cceeeeccCCCCCcceeEEEEEEEee-cCcEEEEEEcCCC-----ChhHHHHHHHHHHH---------------------
Q psy6828 42 TSQVSLSSNPDSDFRYSAIFTPIGIY-KGRIFAIKRIPKK-----SVDITRAMKKELKI--------------------- 94 (392)
Q Consensus 42 ~~~~~~~~~~lg~G~~g~V~~~~~~~-~~~~vAiK~~~~~-----~~~~~~~~~~E~~~--------------------- 94 (392)
....|...+.||+|+||+||+|++.. +++.||||++... .....+.+.+|+.+
T Consensus 16 ~~~~Y~~~~~IG~G~fg~Vy~a~~~~~~~~~vAiK~~~~~~~~~~~~~~~~~~~~E~~iL~~L~h~~iv~~l~~~~~~~L 95 (365)
T PRK09188 16 LSARFVETAVLKRDVFSTVERGYFAGDPGTARAVRRRVSEVPWWSKPLARHLAAREIRALKTVRGIGVVPQLLATGKDGL 95 (365)
T ss_pred ccCCceEccEEeecCcEEEEEEEEcCCCCeEEEEEEecccccccccHHHHHHHHHHHHHHHhccCCCCCcEEEEcCCcEE
Confidence 45667788899999999999999876 6788899987543 12234568888887
Q ss_pred --HHhhcCCcCC-CHHHHHHHHHHHHHHHHHHhcCCcccccCC-CCCceEEcCCceEEEeccccchhccc
Q psy6828 95 --DIMENEDVKL-DNMFIASLVADILRGMLYLHDSALRYHGNL-KASNCLVDSRWVVKLADFGLTEFKRD 160 (392)
Q Consensus 95 --~~l~~~~~~l-~~~~~~~i~~qi~~~l~ylH~~~iiiHrDl-Kp~NIll~~~~~~kl~DFGla~~~~~ 160 (392)
+|+....+.. .......++.|++++|.|||++++ +|||| ||+|||++.++.+||+|||+|+....
T Consensus 96 VmE~~~G~~L~~~~~~~~~~~~~~i~~aL~~lH~~gI-iHrDL~KP~NILv~~~~~ikLiDFGlA~~~~~ 164 (365)
T PRK09188 96 VRGWTEGVPLHLARPHGDPAWFRSAHRALRDLHRAGI-THNDLAKPQNWLMGPDGEAAVIDFQLASVFRR 164 (365)
T ss_pred EEEccCCCCHHHhCccchHHHHHHHHHHHHHHHHCCC-eeCCCCCcceEEEcCCCCEEEEECccceeccc
Confidence 3332222110 001125788999999999999999 99999 99999999999999999999997654
No 232
>cd05037 PTK_Jak_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases. Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; pseudokinase domain (repeat1). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the ki
Probab=99.74 E-value=4.9e-18 Score=155.53 Aligned_cols=106 Identities=18% Similarity=0.229 Sum_probs=85.8
Q ss_pred CCCCcceeEEEEEEEeecC----------cEEEEEEcCCCChhHHHHHHHHHHH--------------------------
Q psy6828 51 PDSDFRYSAIFTPIGIYKG----------RIFAIKRIPKKSVDITRAMKKELKI-------------------------- 94 (392)
Q Consensus 51 ~lg~G~~g~V~~~~~~~~~----------~~vAiK~~~~~~~~~~~~~~~E~~~-------------------------- 94 (392)
.||+|+||.||++.+..++ ..+++|.+...... ...+.+|+.+
T Consensus 2 ~lg~G~~~~v~~~~~~~~~~~~~~~~~~~~~v~~k~~~~~~~~-~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~lv~e 80 (259)
T cd05037 2 HLGQGTFTNIYKGVLRVQSDLDIVGPGQEVSVVLKVLGSDHRD-SLAFFETASLMSQLSHKHLVKLYGVCVRDENIMVEE 80 (259)
T ss_pred cccccccceEEEEEEeccCCccccCCccceeeeeeccccchhh-HHHHHHHHHHHHcCCCcchhheeeEEecCCcEEEEE
Confidence 5899999999999988776 35888887654332 4556666655
Q ss_pred --------HHhhcCCcCCCHHHHHHHHHHHHHHHHHHhcCCcccccCCCCCceEEcCCc-------eEEEeccccchhc
Q psy6828 95 --------DIMENEDVKLDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLVDSRW-------VVKLADFGLTEFK 158 (392)
Q Consensus 95 --------~~l~~~~~~l~~~~~~~i~~qi~~~l~ylH~~~iiiHrDlKp~NIll~~~~-------~~kl~DFGla~~~ 158 (392)
+++......+++..+..++.|++.||.|||++++ +||||||+||+++.++ .+|++|||++...
T Consensus 81 ~~~~~~L~~~l~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~i-~H~dlkp~Nill~~~~~~~~~~~~~kl~Dfg~a~~~ 158 (259)
T cd05037 81 YVKFGPLDVFLHREKNNVSLHWKLDVAKQLASALHYLEDKKL-VHGNVCGKNILVARYGLNEGYVPFIKLSDPGIPITV 158 (259)
T ss_pred cCCCCcHHHHHHhhccCCCHHHHHHHHHHHHHHHHHHhhCCe-ecccCccceEEEecCccccCCceeEEeCCCCccccc
Confidence 2333333268899999999999999999999999 9999999999999887 7999999998763
No 233
>cd07833 STKc_CDKL Catalytic domain of Cyclin-Dependent protein Kinase Like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like (CDKL) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDKL1-5 and similar proteins. Some CDKLs, like CDKL1 and CDKL3, may be implicated in transformation and others, like CDKL3 and CDKL5, are associated with mental retardation when impaired. CDKL2 plays a role in learning
Probab=99.74 E-value=7.8e-18 Score=156.78 Aligned_cols=113 Identities=24% Similarity=0.364 Sum_probs=92.5
Q ss_pred eeccCCCCCcceeEEEEEEEeecCcEEEEEEcCCCCh--hHHHHHHHHHHH-----------------------------
Q psy6828 46 SLSSNPDSDFRYSAIFTPIGIYKGRIFAIKRIPKKSV--DITRAMKKELKI----------------------------- 94 (392)
Q Consensus 46 ~~~~~~lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~~--~~~~~~~~E~~~----------------------------- 94 (392)
|...+.+|+|+||.||++.+..+++.||+|.++.... ...+.+.+|+.+
T Consensus 3 y~~~~~i~~g~~~~v~~~~~~~~~~~v~vK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~iv~e~~ 82 (288)
T cd07833 3 YEVLGVVGEGAYGVVLKCRNKATGEIVAIKKFKESEDDEDVKKTALREVKVLRQLRHENIVNLKEAFRRKGRLYLVFEYV 82 (288)
T ss_pred eeEEEEecccCCeeEEEEEeCCCCcEEEEehhhhhcccccchhHHHHHHHHHHhcCCCCeeehhheEEECCEEEEEEecC
Confidence 4456679999999999999999999999999875422 334567777766
Q ss_pred -----HHhhcCCcCCCHHHHHHHHHHHHHHHHHHhcCCcccccCCCCCceEEcCCceEEEeccccchhcc
Q psy6828 95 -----DIMENEDVKLDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLVDSRWVVKLADFGLTEFKR 159 (392)
Q Consensus 95 -----~~l~~~~~~l~~~~~~~i~~qi~~~l~ylH~~~iiiHrDlKp~NIll~~~~~~kl~DFGla~~~~ 159 (392)
+.+......+++.++..++.|++.||.|||++++ +|+||||+||+++.++.+||+|||++....
T Consensus 83 ~~~~l~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~i-~H~dl~~~ni~~~~~~~~kl~d~g~~~~~~ 151 (288)
T cd07833 83 ERTLLELLEASPGGLPPDAVRSYIWQLLQAIAYCHSHNI-IHRDIKPENILVSESGVLKLCDFGFARALR 151 (288)
T ss_pred CCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCe-ecCCCCHHHeEECCCCCEEEEeeecccccC
Confidence 1222222358999999999999999999999999 999999999999999999999999987643
No 234
>cd05110 PTKc_HER4 Catalytic domain of the Protein Tyrosine Kinase, HER4. Protein Tyrosine Kinase (PTK) family; HER4 (ErbB4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER4 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve as bindin
Probab=99.74 E-value=1.1e-17 Score=157.52 Aligned_cols=111 Identities=24% Similarity=0.362 Sum_probs=89.6
Q ss_pred eccCCCCCcceeEEEEEEEeecCc----EEEEEEcCCCCh-hHHHHHHHHHHH---------------------------
Q psy6828 47 LSSNPDSDFRYSAIFTPIGIYKGR----IFAIKRIPKKSV-DITRAMKKELKI--------------------------- 94 (392)
Q Consensus 47 ~~~~~lg~G~~g~V~~~~~~~~~~----~vAiK~~~~~~~-~~~~~~~~E~~~--------------------------- 94 (392)
...+.||+|+||.||++.+..+++ .||+|.+..... .....+.+|+.+
T Consensus 10 ~~~~~lg~G~~g~vy~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~~~~l~h~niv~~~~~~~~~~~~~v~e~ 89 (303)
T cd05110 10 KRVKVLGSGAFGTVYKGIWVPEGETVKIPVAIKILNETTGPKANVEFMDEALIMASMDHPHLVRLLGVCLSPTIQLVTQL 89 (303)
T ss_pred eeccccccCCCccEEEEEEecCCCcceeeEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCcccEEEEEcCCCceeeehh
Confidence 456789999999999999887776 579998875433 223356667665
Q ss_pred -------HHhhcCCcCCCHHHHHHHHHHHHHHHHHHhcCCcccccCCCCCceEEcCCceEEEeccccchhc
Q psy6828 95 -------DIMENEDVKLDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLVDSRWVVKLADFGLTEFK 158 (392)
Q Consensus 95 -------~~l~~~~~~l~~~~~~~i~~qi~~~l~ylH~~~iiiHrDlKp~NIll~~~~~~kl~DFGla~~~ 158 (392)
+++......+++..+..++.|++.||.|||++++ +||||||+||+++.++.+||+|||+++..
T Consensus 90 ~~~g~l~~~~~~~~~~~~~~~~~~~~~qi~~~L~~LH~~~i-vH~dikp~Nill~~~~~~kL~Dfg~~~~~ 159 (303)
T cd05110 90 MPHGCLLDYVHEHKDNIGSQLLLNWCVQIAKGMMYLEERRL-VHRDLAARNVLVKSPNHVKITDFGLARLL 159 (303)
T ss_pred cCCCCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHhhcCe-eccccccceeeecCCCceEEccccccccc
Confidence 2222333357889999999999999999999999 99999999999999999999999999754
No 235
>cd06659 STKc_PAK6 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 6. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 6, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK6 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK6 may play a role i
Probab=99.74 E-value=3.2e-18 Score=160.68 Aligned_cols=110 Identities=20% Similarity=0.302 Sum_probs=91.0
Q ss_pred ccCCCCCcceeEEEEEEEeecCcEEEEEEcCCCChhHHHHHHHHHHH--------------------------HHhhc--
Q psy6828 48 SSNPDSDFRYSAIFTPIGIYKGRIFAIKRIPKKSVDITRAMKKELKI--------------------------DIMEN-- 99 (392)
Q Consensus 48 ~~~~lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~~~~~~~~~~E~~~--------------------------~~l~~-- 99 (392)
....+|+|+||.||++.+..+++.||+|.+........+.+.+|+.+ +++..
T Consensus 25 ~~~~ig~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l~hp~i~~~~~~~~~~~~~~iv~e~~~~~~ 104 (297)
T cd06659 25 NYIKIGEGSTGIVCIAREKHSGRQVAVKMMDLRKQQRRELLFNEVVIMRDYQHQNVVEMYKSYLVGEELWVLMEFLQGGA 104 (297)
T ss_pred hhhhcCCCCceeEEEEEEcCCCCEEEEEEEEecccchHHHHHHHHHHHHhCCCCchhhhhhheeeCCeEEEEEecCCCCC
Confidence 35579999999999999988999999999976544445567777665 12211
Q ss_pred -----CCcCCCHHHHHHHHHHHHHHHHHHhcCCcccccCCCCCceEEcCCceEEEeccccchhc
Q psy6828 100 -----EDVKLDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLVDSRWVVKLADFGLTEFK 158 (392)
Q Consensus 100 -----~~~~l~~~~~~~i~~qi~~~l~ylH~~~iiiHrDlKp~NIll~~~~~~kl~DFGla~~~ 158 (392)
....+++..+..++.|++.||.|||++++ +||||||+||+++.++.+||+|||++...
T Consensus 105 L~~~~~~~~~~~~~~~~~~~qi~~~L~~LH~~~i-vH~dl~p~Nill~~~~~~kL~dfg~~~~~ 167 (297)
T cd06659 105 LTDIVSQTRLNEEQIATVCESVLQALCYLHSQGV-IHRDIKSDSILLTLDGRVKLSDFGFCAQI 167 (297)
T ss_pred HHHHHhhcCCCHHHHHHHHHHHHHHHHHHHhCCe-ecCCCCHHHeEEccCCcEEEeechhHhhc
Confidence 11258899999999999999999999999 99999999999999999999999998643
No 236
>cd05034 PTKc_Src_like Catalytic domain of Src kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Src kinase subfamily; catalytic (c) domain. Src subfamily members include Src, Lck, Hck, Blk, Lyn, Fgr, Fyn, Yrk, and Yes. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) proteins are cytoplasmic (or non-receptor) tyr kinases which are anchored to the plasma membrane. They contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-t
Probab=99.74 E-value=1.5e-17 Score=152.73 Aligned_cols=130 Identities=25% Similarity=0.304 Sum_probs=101.8
Q ss_pred eeeccCCCCCcceeEEEEEEEeecCcEEEEEEcCCCChhHHHHHHHHHHH------------------------------
Q psy6828 45 VSLSSNPDSDFRYSAIFTPIGIYKGRIFAIKRIPKKSVDITRAMKKELKI------------------------------ 94 (392)
Q Consensus 45 ~~~~~~~lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~~~~~~~~~~E~~~------------------------------ 94 (392)
.+...+.+|+|+||.||++.+. +++.||||.+...... .+.+.+|+.+
T Consensus 7 ~~~i~~~ig~g~~~~v~~~~~~-~~~~~~vK~~~~~~~~-~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~~~ 84 (261)
T cd05034 7 SLKLERKLGAGQFGEVWMGTWN-GTTKVAVKTLKPGTMS-PEAFLQEAQIMKKLRHDKLVQLYAVCSEEEPIYIVTEYMS 84 (261)
T ss_pred heeeeeeeccCcceEEEEEEEc-CCceEEEEEecCCccC-HHHHHHHHHHHhhCCCCCEeeeeeeeecCCceEEEEeccC
Confidence 3555678999999999999854 5688999999865443 3456677666
Q ss_pred -----HHhhc-CCcCCCHHHHHHHHHHHHHHHHHHhcCCcccccCCCCCceEEcCCceEEEeccccchhccccc------
Q psy6828 95 -----DIMEN-EDVKLDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLVDSRWVVKLADFGLTEFKRDAE------ 162 (392)
Q Consensus 95 -----~~l~~-~~~~l~~~~~~~i~~qi~~~l~ylH~~~iiiHrDlKp~NIll~~~~~~kl~DFGla~~~~~~~------ 162 (392)
+++.. ....+++..+..++.|++.|+.|||++++ +|+||||+||++++++.+|++|||++.......
T Consensus 85 ~~~L~~~i~~~~~~~~~~~~~~~~~~~i~~al~~lh~~~i-~h~di~p~nili~~~~~~~l~d~g~~~~~~~~~~~~~~~ 163 (261)
T cd05034 85 KGSLLDFLKSGEGKKLRLPQLVDMAAQIAEGMAYLESRNY-IHRDLAARNILVGENLVCKIADFGLARLIEDDEYTAREG 163 (261)
T ss_pred CCCHHHHHhccccCCCCHHHHHHHHHHHHHHHHHHHhCCc-ccCCcchheEEEcCCCCEEECccccceeccchhhhhhhc
Confidence 23322 22358999999999999999999999999 999999999999999999999999987543110
Q ss_pred ------------------cccccccceeeeeee
Q psy6828 163 ------------------YTGTDQHSFLQHTYH 177 (392)
Q Consensus 163 ------------------~~~~d~~s~g~~~~~ 177 (392)
....|+||+|+++|+
T Consensus 164 ~~~~~~y~~PE~~~~~~~~~~~Di~slG~il~~ 196 (261)
T cd05034 164 AKFPIKWTAPEAANYGRFTIKSDVWSFGILLTE 196 (261)
T ss_pred cCCCccccCHHHhccCCcCchhHHHHHHHHHHH
Confidence 113489999988887
No 237
>cd06628 STKc_MAPKKK_Byr2_like Catalytic domain of fungal Byr2-like MAP Kinase Kinase Kinases. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Byr2-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Schizosaccharomyces pombe Byr2, Saccharomyces cerevisiae and Cryptococcus neoformans Ste11, and related proteins. They contain an N-terminal SAM (sterile alpha-motif) domain, which mediates protein-protein interaction, and a C-terminal catalytic domain. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate
Probab=99.74 E-value=5.5e-18 Score=156.13 Aligned_cols=111 Identities=23% Similarity=0.492 Sum_probs=90.8
Q ss_pred eccCCCCCcceeEEEEEEEeecCcEEEEEEcCCCCh---------hHHHHHHHHHHH-----------------------
Q psy6828 47 LSSNPDSDFRYSAIFTPIGIYKGRIFAIKRIPKKSV---------DITRAMKKELKI----------------------- 94 (392)
Q Consensus 47 ~~~~~lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~~---------~~~~~~~~E~~~----------------------- 94 (392)
.....+|+|+||.||.|.+..+++.||+|.+..... ...+.+.+|+.+
T Consensus 3 ~~~~~ig~g~~~~v~~a~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~ 82 (267)
T cd06628 3 IKGALIGSGSFGSVYLGMNASSGELMAVKQVELPSVSASSKDRKRSMLDALAREIALLKELQHENIVQYLGSSLDADHLN 82 (267)
T ss_pred cccceeecCCCeEEEEEEecCCCcEEEEEEecCCCcccchhHHHHHHHHHHHHHHHHHHhcCCCCeeeEEEEEEeCCccE
Confidence 345679999999999999988999999998865432 123456677665
Q ss_pred ------------HHhhcCCcCCCHHHHHHHHHHHHHHHHHHhcCCcccccCCCCCceEEcCCceEEEeccccchhcc
Q psy6828 95 ------------DIMENEDVKLDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLVDSRWVVKLADFGLTEFKR 159 (392)
Q Consensus 95 ------------~~l~~~~~~l~~~~~~~i~~qi~~~l~ylH~~~iiiHrDlKp~NIll~~~~~~kl~DFGla~~~~ 159 (392)
+++... ..+++..+..++.|++.||.|||++++ +||||||+||++++++.+||+|||+++...
T Consensus 83 lv~e~~~~~~L~~~l~~~-~~l~~~~~~~~~~~l~~~l~~lH~~~i-vH~di~p~nil~~~~~~~~l~dfg~~~~~~ 157 (267)
T cd06628 83 IFLEYVPGGSVAALLNNY-GAFEETLVRNFVRQILKGLNYLHNRGI-IHRDIKGANILVDNKGGIKISDFGISKKLE 157 (267)
T ss_pred EEEEecCCCCHHHHHHhc-cCccHHHHHHHHHHHHHHHHHHHhcCc-ccccCCHHHEEEcCCCCEEecccCCCcccc
Confidence 222222 358889999999999999999999999 999999999999999999999999987654
No 238
>cd07832 STKc_CCRK Catalytic domain of the Serine/Threonine Kinase, Cell Cycle-Related Kinase. Serine/Threonine Kinases (STKs), Cell Cycle-Related Kinase (CCRK) p42 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CCRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CCRK was previously called p42. It is a Cyclin-Dependent Kinase (CDK)-Activating Kinase (CAK) which is essential for the activation of CDK2. It is indispensable for cell growth and has been implicated in the progression of glioblastoma multiforme. In the heart, a splice variant of CCRK with a different C-terminal half is expressed, this variant promotes cardiac cell growth and survival and is significantly down-regulated during the development of hea
Probab=99.74 E-value=3.9e-18 Score=158.67 Aligned_cols=112 Identities=23% Similarity=0.410 Sum_probs=93.6
Q ss_pred eccCCCCCcceeEEEEEEEeecCcEEEEEEcCCCCh--hHHHHHHHHHHH------------------------------
Q psy6828 47 LSSNPDSDFRYSAIFTPIGIYKGRIFAIKRIPKKSV--DITRAMKKELKI------------------------------ 94 (392)
Q Consensus 47 ~~~~~lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~~--~~~~~~~~E~~~------------------------------ 94 (392)
...+.+|+|+||.||++.+..+|+.||+|.+..... ...+.+.+|+.+
T Consensus 3 ~~~~~l~~g~~~~v~~~~~~~~~~~~~vK~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~~v~e~~~ 82 (286)
T cd07832 3 KILGRIGEGAHGIVFKAKDRETGETVALKKVALRRLEGGIPNQALREIKALQACQHPYVVKLLDVFPHGSGFVLVMEYMP 82 (286)
T ss_pred eEEeecccCCCcEEEEEEECCCCceEEEEEEEcccccchhhHHHHHHHHHHHhCCCCCCcceeeEEecCCeeEEEecccC
Confidence 445679999999999999998999999999976542 234567777765
Q ss_pred ----HHhhcCCcCCCHHHHHHHHHHHHHHHHHHhcCCcccccCCCCCceEEcCCceEEEeccccchhcc
Q psy6828 95 ----DIMENEDVKLDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLVDSRWVVKLADFGLTEFKR 159 (392)
Q Consensus 95 ----~~l~~~~~~l~~~~~~~i~~qi~~~l~ylH~~~iiiHrDlKp~NIll~~~~~~kl~DFGla~~~~ 159 (392)
+++......+++.++..++.|++.||.|||+.++ +|+||||+||+++.++.++++|||++....
T Consensus 83 ~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i-~H~dl~p~ni~~~~~~~~~l~dfg~~~~~~ 150 (286)
T cd07832 83 SDLSEVLRDEERPLPEAQVKSYMRMLLKGVAYMHANGI-MHRDLKPANLLISADGVLKIADFGLARLFS 150 (286)
T ss_pred CCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCe-ecCCcCHHHEEEcCCCcEEEeeeeeccccc
Confidence 3333333468999999999999999999999999 999999999999999999999999987654
No 239
>cd06637 STKc_TNIK Catalytic domain of the Protein Serine/Threonine Kinase, Traf2- and Nck-interacting kinase. Serine/threonine kinases (STKs), Traf2- and Nck-interacting kinase (TNIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TNIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to mitogen-activated protein kinase (MAPK), kinase kinase kinase 4 (MAP4K4), and MAP4K6. MAP4Ks participate in some MAPK signaling pathways by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). TNIK is an effector of Rap2, a small GTP-binding protein from the Ras family. TNIK specifically activ
Probab=99.74 E-value=3.3e-18 Score=158.06 Aligned_cols=113 Identities=25% Similarity=0.392 Sum_probs=90.7
Q ss_pred eeeeccCCCCCcceeEEEEEEEeecCcEEEEEEcCCCChhHHHHHHHHHHH-----------------------------
Q psy6828 44 QVSLSSNPDSDFRYSAIFTPIGIYKGRIFAIKRIPKKSVDITRAMKKELKI----------------------------- 94 (392)
Q Consensus 44 ~~~~~~~~lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~~~~~~~~~~E~~~----------------------------- 94 (392)
..|...+.+|+|+||.||+|.+..+++.||+|.+..... ....+.+|+.+
T Consensus 6 ~~y~~~~~lg~g~~g~vy~~~~~~~~~~~aik~~~~~~~-~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~~~~~~~~ 84 (272)
T cd06637 6 GIFELVELVGNGTYGQVYKGRHVKTGQLAAIKVMDVTGD-EEEEIKQEINMLKKYSHHRNIATYYGAFIKKNPPGMDDQL 84 (272)
T ss_pred hhhhHHHheeecCCeEEEEEEEcCCCcEEEEEEEEcCCc-cHHHHHHHHHHHHHhcCCCCeeeEeeEEeecCCCCCCcEE
Confidence 345556789999999999999999999999999865432 22344455443
Q ss_pred -------------HHhhc-CCcCCCHHHHHHHHHHHHHHHHHHhcCCcccccCCCCCceEEcCCceEEEeccccchhc
Q psy6828 95 -------------DIMEN-EDVKLDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLVDSRWVVKLADFGLTEFK 158 (392)
Q Consensus 95 -------------~~l~~-~~~~l~~~~~~~i~~qi~~~l~ylH~~~iiiHrDlKp~NIll~~~~~~kl~DFGla~~~ 158 (392)
+++.. ....+++..+..++.|++.||.|||++++ +||||||+||+++.++.+||+|||++...
T Consensus 85 ~iv~e~~~~~~L~~~l~~~~~~~l~~~~~~~~~~qi~~~l~~LH~~~i-vh~dl~~~nili~~~~~~~l~Dfg~~~~~ 161 (272)
T cd06637 85 WLVMEFCGAGSVTDLIKNTKGNTLKEEWIAYICREILRGLSHLHQHKV-IHRDIKGQNVLLTENAEVKLVDFGVSAQL 161 (272)
T ss_pred EEEEEcCCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHCCC-ccCCCCHHHEEECCCCCEEEccCCCceec
Confidence 22222 22358899999999999999999999999 99999999999999999999999998754
No 240
>cd07847 STKc_CDKL1_4 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 1 and 4. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 1 (CDKL1) and CDKL4 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL1 and CDKL4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL1, also called p42 KKIALRE, is a glial protein that is upregulated in gliosis. It is present in neuroblastoma and A431 human carcinoma cells, and may be implicated in neoplastic transformation. The functio
Probab=99.74 E-value=6.4e-18 Score=157.21 Aligned_cols=112 Identities=20% Similarity=0.317 Sum_probs=91.1
Q ss_pred eeccCCCCCcceeEEEEEEEeecCcEEEEEEcCCCCh--hHHHHHHHHHHH--------------------------HHh
Q psy6828 46 SLSSNPDSDFRYSAIFTPIGIYKGRIFAIKRIPKKSV--DITRAMKKELKI--------------------------DIM 97 (392)
Q Consensus 46 ~~~~~~lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~~--~~~~~~~~E~~~--------------------------~~l 97 (392)
|.....+|+|+||.||++.+..+++.||+|.+..... ...+.+.+|+.+ +++
T Consensus 3 y~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~v~e~~ 82 (286)
T cd07847 3 YEKLSKIGEGSYGVVFKCRNRETGQIVAIKKFVESEDDPVIKKIALREIRMLKQLKHPNLVNLIEVFRRKRKLHLVFEYC 82 (286)
T ss_pred eeeeeeecccCCeEEEEEEECCCCcEEEEEEEeecccCccccHHHHHHHHHHHhCCCCCEeeeeeEEeeCCEEEEEEecc
Confidence 3445679999999999999998999999998864322 223456667666 121
Q ss_pred --------hcCCcCCCHHHHHHHHHHHHHHHHHHhcCCcccccCCCCCceEEcCCceEEEeccccchhc
Q psy6828 98 --------ENEDVKLDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLVDSRWVVKLADFGLTEFK 158 (392)
Q Consensus 98 --------~~~~~~l~~~~~~~i~~qi~~~l~ylH~~~iiiHrDlKp~NIll~~~~~~kl~DFGla~~~ 158 (392)
......+++..+..++.|++.||.|||+.++ +||||||+||+++.++.+||+|||++...
T Consensus 83 ~~~~l~~~~~~~~~~~~~~~~~~~~ql~~~l~~LH~~~i-~H~dl~p~nil~~~~~~~~l~dfg~~~~~ 150 (286)
T cd07847 83 DHTVLNELEKNPRGVPEHLIKKIIWQTLQAVNFCHKHNC-IHRDVKPENILITKQGQIKLCDFGFARIL 150 (286)
T ss_pred CccHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHCCc-eecCCChhhEEEcCCCcEEECccccceec
Confidence 1222368999999999999999999999999 99999999999999999999999998754
No 241
>cd06655 STKc_PAK2 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 2. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 2, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK2 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding
Probab=99.74 E-value=4.4e-18 Score=159.68 Aligned_cols=115 Identities=22% Similarity=0.328 Sum_probs=95.6
Q ss_pred eeeeccCCCCCcceeEEEEEEEeecCcEEEEEEcCCCChhHHHHHHHHHHH--------------------------HHh
Q psy6828 44 QVSLSSNPDSDFRYSAIFTPIGIYKGRIFAIKRIPKKSVDITRAMKKELKI--------------------------DIM 97 (392)
Q Consensus 44 ~~~~~~~~lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~~~~~~~~~~E~~~--------------------------~~l 97 (392)
..|...+.+|.|+||.||++.+..+++.||+|.+........+.+.+|+.. +++
T Consensus 19 ~~y~~~~~lg~g~~g~vy~~~~~~~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~ 98 (296)
T cd06655 19 KKYTRYEKIGQGASGTVFTAIDVATGQEVAIKQINLQKQPKKELIINEILVMKELKNPNIVNFLDSFLVGDELFVVMEYL 98 (296)
T ss_pred ceEEEEEEEecCCCeEEEEEEEcCCCcEEEEEEEecccCchHHHHHHHHHHHHhcCCCceeeeeeeEecCceEEEEEEec
Confidence 446667789999999999999999999999999976655556677777776 111
Q ss_pred hcC-------CcCCCHHHHHHHHHHHHHHHHHHhcCCcccccCCCCCceEEcCCceEEEeccccchhcc
Q psy6828 98 ENE-------DVKLDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLVDSRWVVKLADFGLTEFKR 159 (392)
Q Consensus 98 ~~~-------~~~l~~~~~~~i~~qi~~~l~ylH~~~iiiHrDlKp~NIll~~~~~~kl~DFGla~~~~ 159 (392)
..+ ...+++.++..++.|++.||.|||++++ +||||||+||+++.++.+||+|||++....
T Consensus 99 ~~~~L~~~~~~~~l~~~~~~~i~~~l~~al~~LH~~~i-~H~dL~p~Nili~~~~~~kl~dfg~~~~~~ 166 (296)
T cd06655 99 AGGSLTDVVTETCMDEAQIAAVCRECLQALEFLHANQV-IHRDIKSDNVLLGMDGSVKLTDFGFCAQIT 166 (296)
T ss_pred CCCcHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHCCc-ccCCCCHHHEEECCCCCEEEccCccchhcc
Confidence 111 1258999999999999999999999999 999999999999999999999999987543
No 242
>cd05035 PTKc_Axl_like Catalytic Domain of Axl-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Axl subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The Axl subfamily consists of Axl, Tyro3 (or Sky), Mer (or Mertk), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl subfamily members are implicated in a variety of cellu
Probab=99.74 E-value=1.7e-17 Score=153.18 Aligned_cols=110 Identities=21% Similarity=0.242 Sum_probs=87.9
Q ss_pred ccCCCCCcceeEEEEEEEeec---CcEEEEEEcCCCCh--hHHHHHHHHHHH----------------------------
Q psy6828 48 SSNPDSDFRYSAIFTPIGIYK---GRIFAIKRIPKKSV--DITRAMKKELKI---------------------------- 94 (392)
Q Consensus 48 ~~~~lg~G~~g~V~~~~~~~~---~~~vAiK~~~~~~~--~~~~~~~~E~~~---------------------------- 94 (392)
..+.+|+|+||.||.|....+ +..||+|.++.... ...+.+.+|+..
T Consensus 3 ~~~~lg~G~~g~v~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~ 82 (273)
T cd05035 3 LGKILGEGEFGSVMEGQLSQDDGSQLKVAVKTMKLDIHTYSEIEEFLSEAACMKDFDHPNVMKLIGVCFEASSLQKIPKP 82 (273)
T ss_pred cccccCcCCCceEEEEEEecCCCCcceEEEEEeccCcCCHHHHHHHHHHHHHHHhCCCCCeeeEEeeeccCCccccCccc
Confidence 456799999999999987654 47899999875432 334567777665
Q ss_pred ----HHhh--------------cCCcCCCHHHHHHHHHHHHHHHHHHhcCCcccccCCCCCceEEcCCceEEEeccccch
Q psy6828 95 ----DIME--------------NEDVKLDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLVDSRWVVKLADFGLTE 156 (392)
Q Consensus 95 ----~~l~--------------~~~~~l~~~~~~~i~~qi~~~l~ylH~~~iiiHrDlKp~NIll~~~~~~kl~DFGla~ 156 (392)
+++. .....+++..+..++.|++.||.|||++++ +||||||+||++++++.+||+|||+++
T Consensus 83 ~~v~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~aL~~lH~~~i-~H~dlkp~Nil~~~~~~~kl~dfg~~~ 161 (273)
T cd05035 83 MVILPFMKHGDLHSFLLYSRLGGLPEKLPLQTLLKFMVDIALGMEYLSNRNF-IHRDLAARNCMLREDMTVCVADFGLSK 161 (273)
T ss_pred EEEEeccCCCCHHHHHHHhhccCCcccCCHHHHHHHHHHHHHHHHHHHhCCe-eccccchheEEECCCCeEEECCcccee
Confidence 0111 111257888999999999999999999999 999999999999999999999999987
Q ss_pred hc
Q psy6828 157 FK 158 (392)
Q Consensus 157 ~~ 158 (392)
..
T Consensus 162 ~~ 163 (273)
T cd05035 162 KI 163 (273)
T ss_pred ec
Confidence 54
No 243
>KOG3653|consensus
Probab=99.74 E-value=3.1e-18 Score=160.89 Aligned_cols=106 Identities=22% Similarity=0.340 Sum_probs=87.9
Q ss_pred cCCCCCcceeEEEEEEEeecCcEEEEEEcCCCChhHHHHHHHHHHH----------------------------------
Q psy6828 49 SNPDSDFRYSAIFTPIGIYKGRIFAIKRIPKKSVDITRAMKKELKI---------------------------------- 94 (392)
Q Consensus 49 ~~~lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~~~~~~~~~~E~~~---------------------------------- 94 (392)
...+|+|.||.||+|.. +++.||||+++. +....+..|..|
T Consensus 215 ~eli~~Grfg~V~KaqL--~~~~VAVKifp~---~~kqs~~~Ek~Iy~lp~m~h~nIl~Fi~~ekr~t~~~~eywLVt~f 289 (534)
T KOG3653|consen 215 LELIGRGRFGCVWKAQL--DNRLVAVKIFPE---QEKQSFQNEKNIYSLPGMKHENILQFIGAEKRGTADRMEYWLVTEF 289 (534)
T ss_pred HHHhhcCccceeehhhc--cCceeEEEecCH---HHHHHHHhHHHHHhccCccchhHHHhhchhccCCccccceeEEeee
Confidence 45689999999999964 479999999963 445567777777
Q ss_pred -------HHhhcCCcCCCHHHHHHHHHHHHHHHHHHhcC--------CcccccCCCCCceEEcCCceEEEeccccchhcc
Q psy6828 95 -------DIMENEDVKLDNMFIASLVADILRGMLYLHDS--------ALRYHGNLKASNCLVDSRWVVKLADFGLTEFKR 159 (392)
Q Consensus 95 -------~~l~~~~~~l~~~~~~~i~~qi~~~l~ylH~~--------~iiiHrDlKp~NIll~~~~~~kl~DFGla~~~~ 159 (392)
+|+... .++|.+..+++.-++.||+|||+. ..|+|||||+.|||+.+|+++.|+|||+|..+.
T Consensus 290 h~kGsL~dyL~~n--tisw~~~cria~SmarGLa~LHee~p~~d~~Kp~IaHRDlkSkNVLvK~DlTccIaDFGLAl~~~ 367 (534)
T KOG3653|consen 290 HPKGSLCDYLKAN--TISWNSLCRIAESMARGLAHLHEELPRGDHHKPPIAHRDLKSKNVLVKNDLTCCIADFGLALRLE 367 (534)
T ss_pred ccCCcHHHHHHhc--cccHHHHHHHHHHHHHHHHHhcccCCcCCCCCCccccccccccceEEccCCcEEeeccceeEEec
Confidence 555544 489999999999999999999962 225999999999999999999999999998765
Q ss_pred cc
Q psy6828 160 DA 161 (392)
Q Consensus 160 ~~ 161 (392)
..
T Consensus 368 p~ 369 (534)
T KOG3653|consen 368 PG 369 (534)
T ss_pred CC
Confidence 43
No 244
>KOG1345|consensus
Probab=99.74 E-value=8e-18 Score=148.02 Aligned_cols=138 Identities=20% Similarity=0.247 Sum_probs=105.4
Q ss_pred eeeccCCCCCcceeEEEEEEEeecCcEEEEEEcCCCChhHHHHHHHHHHH----------------------------HH
Q psy6828 45 VSLSSNPDSDFRYSAIFTPIGIYKGRIFAIKRIPKKSVDITRAMKKELKI----------------------------DI 96 (392)
Q Consensus 45 ~~~~~~~lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~~~~~~~~~~E~~~----------------------------~~ 96 (392)
.|.....+|+|-||.+.++.|+.+++.+++|.+++.. .....|.+|... ++
T Consensus 25 ~y~I~k~lgeG~FgkIlL~eHr~s~t~ivlKavp~p~-tt~~dF~rEfhY~~~Ls~H~hIi~tY~vaFqt~d~YvF~qE~ 103 (378)
T KOG1345|consen 25 VYTINKQLGEGRFGKILLAEHRQSKTRIVLKAVPRPQ-TTQADFVREFHYSFFLSPHQHIIDTYEVAFQTSDAYVFVQEF 103 (378)
T ss_pred hhhHHHHhcccceeeEEeeeccCCceEEEeeccCcch-hhHHHHHHHhccceeeccchhhhHHHHHHhhcCceEEEeecc
Confidence 3455678999999999999999999999999998664 334567777765 11
Q ss_pred hhcC-------CcCCCHHHHHHHHHHHHHHHHHHhcCCcccccCCCCCceEEc--CCceEEEeccccchhccccc-----
Q psy6828 97 MENE-------DVKLDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLVD--SRWVVKLADFGLTEFKRDAE----- 162 (392)
Q Consensus 97 l~~~-------~~~l~~~~~~~i~~qi~~~l~ylH~~~iiiHrDlKp~NIll~--~~~~~kl~DFGla~~~~~~~----- 162 (392)
.-.+ ...+.|.....++.|+++|+.|+|++++ +|||||.+|||+- +...+||||||+++......
T Consensus 104 aP~gdL~snv~~~GigE~~~K~v~~ql~SAi~fMHsknl-VHRdlK~eNiLif~~df~rvKlcDFG~t~k~g~tV~~~~~ 182 (378)
T KOG1345|consen 104 APRGDLRSNVEAAGIGEANTKKVFAQLLSAIEFMHSKNL-VHRDLKAENILIFDADFYRVKLCDFGLTRKVGTTVKYLEY 182 (378)
T ss_pred CccchhhhhcCcccccHHHHHHHHHHHHHHHHHhhccch-hhcccccceEEEecCCccEEEeeecccccccCceehhhhh
Confidence 1111 1147778889999999999999999999 9999999999993 23579999999987532211
Q ss_pred --------------------cccccccceeeeeee--ccCCCCc
Q psy6828 163 --------------------YTGTDQHSFLQHTYH--VNRAGST 184 (392)
Q Consensus 163 --------------------~~~~d~~s~g~~~~~--~~~~~~~ 184 (392)
...+|+|.||+++|. ...++..
T Consensus 183 ~~~y~~pe~~~~~~ne~~~~~ps~D~WqfGIi~f~cltG~~PWQ 226 (378)
T KOG1345|consen 183 VNNYHAPELCDTVVNEKLVVNPSTDIWQFGIIFFYCLTGKFPWQ 226 (378)
T ss_pred hcccCCcHHHhhccccceEecccccchheeeeeeeeecCCCcch
Confidence 123499999999987 4445544
No 245
>cd08223 STKc_Nek4 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 4. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 4 (Nek4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek4 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. Nek4 is highly abundant in the testis. Its specific function is unknown.
Probab=99.74 E-value=8.5e-18 Score=153.87 Aligned_cols=113 Identities=16% Similarity=0.278 Sum_probs=91.4
Q ss_pred eeccCCCCCcceeEEEEEEEeecCcEEEEEEcCCCCh--hHHHHHHHHHHH-----------------------------
Q psy6828 46 SLSSNPDSDFRYSAIFTPIGIYKGRIFAIKRIPKKSV--DITRAMKKELKI----------------------------- 94 (392)
Q Consensus 46 ~~~~~~lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~~--~~~~~~~~E~~~----------------------------- 94 (392)
|...+.+|+|++|.||.+.+..+++.||+|.+..... ...+.+.+|+.+
T Consensus 2 y~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~lv~e~ 81 (257)
T cd08223 2 YCFVRVVGKGSYGEVSLVRHRTDGKQYVIKKLNLRNASRRERKAAEQEAQLLSQLKHPNIVAYRESWEGEDGLLYIVMGF 81 (257)
T ss_pred ceEEEEecCCCCeEEEEEEEcCCCcEEEEEEEehhhcCHHHHHHHHHHHHHHHhCCCCCeeeeeeeecCCCCEEEEEecc
Confidence 3445679999999999999999999999999865432 334456666655
Q ss_pred -------HHhhc-CCcCCCHHHHHHHHHHHHHHHHHHhcCCcccccCCCCCceEEcCCceEEEeccccchhcc
Q psy6828 95 -------DIMEN-EDVKLDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLVDSRWVVKLADFGLTEFKR 159 (392)
Q Consensus 95 -------~~l~~-~~~~l~~~~~~~i~~qi~~~l~ylH~~~iiiHrDlKp~NIll~~~~~~kl~DFGla~~~~ 159 (392)
+++.. ....+++.++..++.|++.|+.|||++++ +||||||+||+++.++.++|+|||++....
T Consensus 82 ~~~~~l~~~l~~~~~~~l~~~~~~~~~~~l~~~l~~lH~~~i-~H~di~p~nil~~~~~~~~l~df~~~~~~~ 153 (257)
T cd08223 82 CEGGDLYHKLKEQKGKLLPENQVVEWFVQIAMALQYLHEKHI-LHRDLKTQNVFLTRTNIIKVGDLGIARVLE 153 (257)
T ss_pred cCCCcHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCe-eccCCCchhEEEecCCcEEEecccceEEec
Confidence 22221 12248899999999999999999999999 999999999999999999999999987653
No 246
>cd05091 PTKc_Ror2 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 2. Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 2 (Ror2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly
Probab=99.74 E-value=7.9e-18 Score=156.57 Aligned_cols=110 Identities=21% Similarity=0.276 Sum_probs=87.3
Q ss_pred ccCCCCCcceeEEEEEEEeec-----CcEEEEEEcCCCCh-hHHHHHHHHHHH---------------------------
Q psy6828 48 SSNPDSDFRYSAIFTPIGIYK-----GRIFAIKRIPKKSV-DITRAMKKELKI--------------------------- 94 (392)
Q Consensus 48 ~~~~lg~G~~g~V~~~~~~~~-----~~~vAiK~~~~~~~-~~~~~~~~E~~~--------------------------- 94 (392)
..+.||+|+||.||+|.+..+ ++.||+|.++.... ...+.+.+|..+
T Consensus 9 ~~~~lg~G~~g~V~~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~~~~l~h~~iv~~~~~~~~~~~~~~~~e 88 (283)
T cd05091 9 FMEELGEDRFGKVYKGHLFGTAPGEQTQAVAIKTLKDKAEGPLREEFKHEAMMRSRLQHPNIVCLLGVVTKEQPLSMIFS 88 (283)
T ss_pred HHHHhCCCCCCeEEEEEEecCCCCCceeEEEEEEccCCCCHHHHHHHHHHHHHHhcCCCCCcCeEEEEEcCCCceEEEEE
Confidence 356799999999999987543 57899999975533 334557777665
Q ss_pred --------HHhhc---------------CCcCCCHHHHHHHHHHHHHHHHHHhcCCcccccCCCCCceEEcCCceEEEec
Q psy6828 95 --------DIMEN---------------EDVKLDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLVDSRWVVKLAD 151 (392)
Q Consensus 95 --------~~l~~---------------~~~~l~~~~~~~i~~qi~~~l~ylH~~~iiiHrDlKp~NIll~~~~~~kl~D 151 (392)
+++.. ....+++..+..++.|++.||.|+|++++ +||||||+||++++++.+||+|
T Consensus 89 ~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ql~~aL~~lH~~gi-~H~dlkp~Nil~~~~~~~kl~D 167 (283)
T cd05091 89 YCSHSDLHEFLVMRSPHSDVGSTDDDKTVKSTLEPADFVHIVTQIAAGMEFLSSHHV-VHKDLATRNVLVFDKLNVKISD 167 (283)
T ss_pred cCCCCcHHHHHHhcCCCccccccccccccccccCHHHHHHHHHHHHHHHHHHHHcCc-cccccchhheEecCCCceEecc
Confidence 12210 01247888899999999999999999999 9999999999999999999999
Q ss_pred cccchhc
Q psy6828 152 FGLTEFK 158 (392)
Q Consensus 152 FGla~~~ 158 (392)
||+++..
T Consensus 168 fg~~~~~ 174 (283)
T cd05091 168 LGLFREV 174 (283)
T ss_pred ccccccc
Confidence 9998754
No 247
>cd08229 STKc_Nek7 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 7. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 7 (Nek7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek7 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek7 is required for mitotic spindle formation and cytokinesis. It is enriched in the centrosome and is critical for microtubule nucleation. Nek7 is activated by Nek9 during mitosis, and may regulate the p70 ribosomal S6 kinase.
Probab=99.74 E-value=5.4e-18 Score=156.18 Aligned_cols=111 Identities=16% Similarity=0.291 Sum_probs=91.0
Q ss_pred eccCCCCCcceeEEEEEEEeecCcEEEEEEcCCCCh---hHHHHHHHHHHH-----------------------------
Q psy6828 47 LSSNPDSDFRYSAIFTPIGIYKGRIFAIKRIPKKSV---DITRAMKKELKI----------------------------- 94 (392)
Q Consensus 47 ~~~~~lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~~---~~~~~~~~E~~~----------------------------- 94 (392)
...+.||+|+||.||++.+..+++.||||.+..... .....+.+|+.+
T Consensus 5 ~~~~~ig~g~~g~v~~~~~~~~~~~~~vK~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~v~e~~ 84 (267)
T cd08229 5 RIEKKIGRGQFSEVYRATCLLDGVPVALKKVQIFDLMDAKARADCIKEIDLLKQLNHPNVIKYYASFIEDNELNIVLELA 84 (267)
T ss_pred hhhhhhcccCCeEEEEEeecCCCceEEEEeeeehhhhhHHHHHHHHHHHHHHHHccCCchhhhhheeEeCCeEEEEEEec
Confidence 345679999999999999999999999998865332 334466677666
Q ss_pred ------HHhh---cCCcCCCHHHHHHHHHHHHHHHHHHhcCCcccccCCCCCceEEcCCceEEEeccccchhc
Q psy6828 95 ------DIME---NEDVKLDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLVDSRWVVKLADFGLTEFK 158 (392)
Q Consensus 95 ------~~l~---~~~~~l~~~~~~~i~~qi~~~l~ylH~~~iiiHrDlKp~NIll~~~~~~kl~DFGla~~~ 158 (392)
+++. .....+++..+..++.|++.||.|||++++ +|+||||+||+++.++.++++|||++...
T Consensus 85 ~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~i-~H~dl~p~nili~~~~~~~l~dfg~~~~~ 156 (267)
T cd08229 85 DAGDLSRMIKHFKKQKRLIPEKTVWKYFVQLCSALEHMHSRRV-MHRDIKPANVFITATGVVKLGDLGLGRFF 156 (267)
T ss_pred CCCCHHHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHHCCe-ecCCCCHHHEEEcCCCCEEECcchhhhcc
Confidence 2222 122358999999999999999999999999 99999999999999999999999988754
No 248
>cd05114 PTKc_Tec_Rlk Catalytic domain of the Protein Tyrosine Kinases, Tyrosine kinase expressed in hepatocellular carcinoma and Resting lymphocyte kinase. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) and Resting lymphocyte kinase (Rlk); catalytic (c) domain. The PTKc family is part of a larger superfamily, that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec and Rlk (also named Txk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin h
Probab=99.74 E-value=8.4e-18 Score=154.06 Aligned_cols=107 Identities=27% Similarity=0.405 Sum_probs=87.4
Q ss_pred cCCCCCcceeEEEEEEEeecCcEEEEEEcCCCChhHHHHHHHHHHH----------------------------------
Q psy6828 49 SNPDSDFRYSAIFTPIGIYKGRIFAIKRIPKKSVDITRAMKKELKI---------------------------------- 94 (392)
Q Consensus 49 ~~~lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~~~~~~~~~~E~~~---------------------------------- 94 (392)
.+.||+|+||.||++... ++..+|+|.+...... .+.+.+|+.+
T Consensus 9 ~~~lg~G~~~~vy~~~~~-~~~~~a~K~~~~~~~~-~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~iv~e~~~~~~L 86 (256)
T cd05114 9 MKELGSGQFGVVHLGKWR-AQIKVAIKAINEGAMS-EEDFIEEAKVMMKLSHPKLVQLYGVCTQQKPLYIVTEFMENGCL 86 (256)
T ss_pred eeEecCCcCceEEEEEec-cCceEEEEecccCCcc-HHHHHHHHHHHHHCCCCCceeEEEEEccCCCEEEEEEcCCCCcH
Confidence 467999999999999754 5668999998755432 2456667666
Q ss_pred -HHhhcCCcCCCHHHHHHHHHHHHHHHHHHhcCCcccccCCCCCceEEcCCceEEEeccccchhc
Q psy6828 95 -DIMENEDVKLDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLVDSRWVVKLADFGLTEFK 158 (392)
Q Consensus 95 -~~l~~~~~~l~~~~~~~i~~qi~~~l~ylH~~~iiiHrDlKp~NIll~~~~~~kl~DFGla~~~ 158 (392)
+++......+++..+..++.|++.||.|||++++ +||||||+||+++.++.+|++|||+++..
T Consensus 87 ~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i-~H~dl~p~ni~i~~~~~~kl~d~g~~~~~ 150 (256)
T cd05114 87 LNYLRQRQGKLSKDMLLSMCQDVCEGMEYLERNSF-IHRDLAARNCLVSSTGVVKVSDFGMTRYV 150 (256)
T ss_pred HHHHHhCccCCCHHHHHHHHHHHHHHHHHHHHCCc-cccccCcceEEEcCCCeEEECCCCCcccc
Confidence 3333333368999999999999999999999999 99999999999999999999999988754
No 249
>cd06651 STKc_MEKK3 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 3. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK3 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK3 plays an essential role in embryonic angiogenesis and early heart development
Probab=99.74 E-value=7.6e-18 Score=155.34 Aligned_cols=110 Identities=25% Similarity=0.333 Sum_probs=90.3
Q ss_pred eccCCCCCcceeEEEEEEEeecCcEEEEEEcCCCCh-----hHHHHHHHHHHH---------------------------
Q psy6828 47 LSSNPDSDFRYSAIFTPIGIYKGRIFAIKRIPKKSV-----DITRAMKKELKI--------------------------- 94 (392)
Q Consensus 47 ~~~~~lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~~-----~~~~~~~~E~~~--------------------------- 94 (392)
.....+|+|+||.||++.+..+++.||+|.+..... ...+.+.+|+.+
T Consensus 5 ~~~~~lg~g~~g~vy~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~l~ 84 (266)
T cd06651 5 RRGKLLGQGAFGRVYLCYDVDTGRELAAKQVQFDPESPETSKEVSALECEIQLLKNLQHERIVQYYGCLRDRAEKTLTIF 84 (266)
T ss_pred cccceecCCCCEEEEEEEEcCCCcEEEEEEeecCcCCchhHHHHHHHHHHHHHHHHcCCCCeeeEEEEEEcCCCCEEEEE
Confidence 345679999999999999999999999999864321 234567777766
Q ss_pred ----------HHhhcCCcCCCHHHHHHHHHHHHHHHHHHhcCCcccccCCCCCceEEcCCceEEEeccccchhc
Q psy6828 95 ----------DIMENEDVKLDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLVDSRWVVKLADFGLTEFK 158 (392)
Q Consensus 95 ----------~~l~~~~~~l~~~~~~~i~~qi~~~l~ylH~~~iiiHrDlKp~NIll~~~~~~kl~DFGla~~~ 158 (392)
+++... ..+++.....++.|++.||.|||++++ +||||||+||+++.++.+||+|||+++..
T Consensus 85 ~e~~~~~~L~~~l~~~-~~l~~~~~~~~~~qi~~~l~~LH~~~i-~H~~l~p~nil~~~~~~~~l~dfg~~~~~ 156 (266)
T cd06651 85 MEYMPGGSVKDQLKAY-GALTESVTRKYTRQILEGMSYLHSNMI-VHRDIKGANILRDSAGNVKLGDFGASKRL 156 (266)
T ss_pred EeCCCCCcHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHhCCe-eeCCCCHHHEEECCCCCEEEccCCCcccc
Confidence 222222 257889999999999999999999999 99999999999999999999999998754
No 250
>cd06616 PKc_MKK4 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 4. Protein kinases (PKs), MAP kinase kinase 4 (MKK4) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK4 is a dual-specificity PK that phosphorylates and activates
Probab=99.74 E-value=6.4e-18 Score=157.59 Aligned_cols=109 Identities=19% Similarity=0.318 Sum_probs=88.8
Q ss_pred cCCCCCcceeEEEEEEEeecCcEEEEEEcCCCCh-hHHHHHHHHHHH---------------------------HH----
Q psy6828 49 SNPDSDFRYSAIFTPIGIYKGRIFAIKRIPKKSV-DITRAMKKELKI---------------------------DI---- 96 (392)
Q Consensus 49 ~~~lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~~-~~~~~~~~E~~~---------------------------~~---- 96 (392)
.+.||+|+||.||++.+..+++.||+|.+..... .....+.+|+.+ ++
T Consensus 9 ~~~lg~G~~g~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~e~~~l~~~~~~~~iv~~~~~~~~~~~~~~~~e~~~~~ 88 (288)
T cd06616 9 LGEIGRGAFGTVNKMLHKPSGTIMAVKRIRSTVDEKEQKRLLMDLDVVMRSSDCPYIVKFYGALFREGDCWICMELMDIS 88 (288)
T ss_pred HHHhCCCCceEEEEEEECCCCCEEEEEEehhccChHHHHHHHHHHHHHHHhcCCCCEeeeeeEEecCCcEEEEEecccCC
Confidence 4579999999999999999999999999975432 334456667654 11
Q ss_pred ----h----hcCCcCCCHHHHHHHHHHHHHHHHHHhcC-CcccccCCCCCceEEcCCceEEEeccccchhc
Q psy6828 97 ----M----ENEDVKLDNMFIASLVADILRGMLYLHDS-ALRYHGNLKASNCLVDSRWVVKLADFGLTEFK 158 (392)
Q Consensus 97 ----l----~~~~~~l~~~~~~~i~~qi~~~l~ylH~~-~iiiHrDlKp~NIll~~~~~~kl~DFGla~~~ 158 (392)
. ......+++..+..++.|++.||.|||+. ++ +||||||+||+++.++.+||+|||+++..
T Consensus 89 l~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lh~~~~i-~H~dlkp~Nil~~~~~~~kl~dfg~~~~~ 158 (288)
T cd06616 89 LDKFYKYVYEVLKSVIPEEILGKIAVATVKALNYLKEELKI-IHRDVKPSNILLDRNGNIKLCDFGISGQL 158 (288)
T ss_pred HHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHhhcCCe-eccCCCHHHEEEccCCcEEEeecchhHHh
Confidence 1 11224688999999999999999999974 88 99999999999999999999999998754
No 251
>cd06624 STKc_ASK Catalytic domain of the Protein Serine/Threonine Kinase, Apoptosis signal-regulating kinase. Serine/threonine kinases (STKs), Apoptosis signal-regulating kinase (ASK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ASK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Subfamily members are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) and include ASK1, ASK2, and MAPKKK15. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. ASK1 (also called MAPKKK5) functions in the c-Jun N-terminal kina
Probab=99.73 E-value=7.1e-18 Score=155.62 Aligned_cols=108 Identities=25% Similarity=0.417 Sum_probs=90.2
Q ss_pred CCCCCcceeEEEEEEEeecCcEEEEEEcCCCChhHHHHHHHHHHH-----------------------------------
Q psy6828 50 NPDSDFRYSAIFTPIGIYKGRIFAIKRIPKKSVDITRAMKKELKI----------------------------------- 94 (392)
Q Consensus 50 ~~lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~~~~~~~~~~E~~~----------------------------------- 94 (392)
..+|+|+||.||++.+..++..||+|.+........+.+.+|+.+
T Consensus 14 ~~lg~g~~g~v~~~~~~~~~~~v~~k~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L~ 93 (268)
T cd06624 14 VVLGKGTYGIVYAARDLSTQVRIAIKEIPERDSRYVQPLHEEIALHSYLKHRNIVQYLGSDSENGFFKIFMEQVPGGSLS 93 (268)
T ss_pred EEEecCCceEEEEeEecCCCcEEEEEEecCCCHHHHHHHHHHHHHHHhcCCCCeeeeeeeeccCCEEEEEEecCCCCCHH
Confidence 358999999999999998999999999987766666778888776
Q ss_pred HHhhcCCcCC--CHHHHHHHHHHHHHHHHHHhcCCcccccCCCCCceEEcC-CceEEEeccccchhc
Q psy6828 95 DIMENEDVKL--DNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLVDS-RWVVKLADFGLTEFK 158 (392)
Q Consensus 95 ~~l~~~~~~l--~~~~~~~i~~qi~~~l~ylH~~~iiiHrDlKp~NIll~~-~~~~kl~DFGla~~~ 158 (392)
+++......+ ++..+..++.|++.||.|||++++ +||||||+||+++. ++.++|+|||++...
T Consensus 94 ~~l~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~i-~h~dl~p~nil~~~~~~~~~l~dfg~~~~~ 159 (268)
T cd06624 94 ALLRSKWGPLKDNEQTIIFYTKQILEGLKYLHDNQI-VHRDIKGDNVLVNTYSGVVKISDFGTSKRL 159 (268)
T ss_pred HHHHHhcccCCCcHHHHHHHHHHHHHHHHHHHHCCE-eecCCCHHHEEEcCCCCeEEEecchhheec
Confidence 3333222234 788889999999999999999999 99999999999976 678999999998654
No 252
>cd05080 PTKc_Tyk2_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of sign
Probab=99.73 E-value=6.4e-18 Score=157.25 Aligned_cols=109 Identities=27% Similarity=0.364 Sum_probs=88.7
Q ss_pred eccCCCCCcceeEEEEEE----EeecCcEEEEEEcCCCCh-hHHHHHHHHHHH---------------------------
Q psy6828 47 LSSNPDSDFRYSAIFTPI----GIYKGRIFAIKRIPKKSV-DITRAMKKELKI--------------------------- 94 (392)
Q Consensus 47 ~~~~~lg~G~~g~V~~~~----~~~~~~~vAiK~~~~~~~-~~~~~~~~E~~~--------------------------- 94 (392)
...+.||+|+||+||++. ...+++.||+|.++.... ...+.+.+|+.+
T Consensus 7 ~~~~~lg~g~~g~v~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~lv 86 (283)
T cd05080 7 KKIRVLGEGHFGKVSLYCYDPANDGTGEMVAVKTLKRECGQQNTSGWKKEINILKTLYHENIVKYKGCCSEQGGKGLQLI 86 (283)
T ss_pred eeceecccCCCcEEEEeeEccccCCCCceEEEEEeccccChHHHHHHHHHHHHHHhCCCCCEeeEEEEEecCCCceEEEE
Confidence 456789999999998764 335678999999976532 344567777766
Q ss_pred ----------HHhhcCCcCCCHHHHHHHHHHHHHHHHHHhcCCcccccCCCCCceEEcCCceEEEeccccchhc
Q psy6828 95 ----------DIMENEDVKLDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLVDSRWVVKLADFGLTEFK 158 (392)
Q Consensus 95 ----------~~l~~~~~~l~~~~~~~i~~qi~~~l~ylH~~~iiiHrDlKp~NIll~~~~~~kl~DFGla~~~ 158 (392)
+++.. ..+++.++..++.|++.||.|||++++ +||||||+||++++++.+||+|||+++..
T Consensus 87 ~e~~~~~~l~~~~~~--~~l~~~~~~~i~~~l~~~l~~lH~~~i-~H~dlkp~Nili~~~~~~~l~dfg~~~~~ 157 (283)
T cd05080 87 MEYVPLGSLRDYLPK--HKLNLAQLLLFAQQICEGMAYLHSQHY-IHRDLAARNVLLDNDRLVKIGDFGLAKAV 157 (283)
T ss_pred ecCCCCCCHHHHHHH--cCCCHHHHHHHHHHHHHHHHHHHHCCe-eccccChheEEEcCCCcEEEeeccccccc
Confidence 22211 158999999999999999999999999 99999999999999999999999998754
No 253
>cd05093 PTKc_TrkB Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase B. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase B (TrkB); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkB is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkB to its ligands, brain-derived neurotrophic factor (BDNF) or neurotrophin 4 (NT4), results in receptor oligomerization and activation of the catalytic domain. TrkB is broadly
Probab=99.73 E-value=1.9e-17 Score=154.55 Aligned_cols=112 Identities=20% Similarity=0.367 Sum_probs=91.3
Q ss_pred eeccCCCCCcceeEEEEEEEe-----ecCcEEEEEEcCCCChhHHHHHHHHHHH--------------------------
Q psy6828 46 SLSSNPDSDFRYSAIFTPIGI-----YKGRIFAIKRIPKKSVDITRAMKKELKI-------------------------- 94 (392)
Q Consensus 46 ~~~~~~lg~G~~g~V~~~~~~-----~~~~~vAiK~~~~~~~~~~~~~~~E~~~-------------------------- 94 (392)
+...+.+|+|+||.||++... .++..+|+|.+........+.+.+|+.+
T Consensus 7 ~~~~~~lg~G~~~~v~~~~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~ 86 (288)
T cd05093 7 IVLKRELGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDASDNARKDFHREAELLTNLQHEHIVKFYGVCVEGDPLIMVF 86 (288)
T ss_pred eeeccccCCcCCeeEEeeEeccCCCCCcceEEEEEecCCcCHHHHHHHHHHHHHHHhCCCCCcceEEEEEecCCccEEEE
Confidence 455778999999999999853 3456799999987665556677788776
Q ss_pred ---------HHhhcC------------CcCCCHHHHHHHHHHHHHHHHHHhcCCcccccCCCCCceEEcCCceEEEeccc
Q psy6828 95 ---------DIMENE------------DVKLDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLVDSRWVVKLADFG 153 (392)
Q Consensus 95 ---------~~l~~~------------~~~l~~~~~~~i~~qi~~~l~ylH~~~iiiHrDlKp~NIll~~~~~~kl~DFG 153 (392)
+++... ...+++..+..++.|++.||.|||++++ +||||||+||++++++.+||+|||
T Consensus 87 e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ql~~aL~~lH~~~i-~H~dlkp~Nili~~~~~~kl~dfg 165 (288)
T cd05093 87 EYMKHGDLNKFLRAHGPDAVLMAEGNRPAELTQSQMLHIAQQIAAGMVYLASQHF-VHRDLATRNCLVGENLLVKIGDFG 165 (288)
T ss_pred EcCCCCCHHHHHHHcCCccccccccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCe-eecccCcceEEEccCCcEEeccCC
Confidence 222211 1248999999999999999999999999 999999999999999999999999
Q ss_pred cchhc
Q psy6828 154 LTEFK 158 (392)
Q Consensus 154 la~~~ 158 (392)
+++..
T Consensus 166 ~~~~~ 170 (288)
T cd05093 166 MSRDV 170 (288)
T ss_pred ccccc
Confidence 98754
No 254
>cd05033 PTKc_EphR Catalytic domain of Ephrin Receptor Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). They can be classified into two classes (EphA and EphB), according to their extracellular sequences, which largely correspond to binding preferences for either GPI-anchored ephrin-A ligands or transmembrane ephrin-B ligands. Vertebrates have ten EphA and six EhpB receptors, which display promiscuous ligand interactions within each class. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment
Probab=99.73 E-value=2.2e-17 Score=152.13 Aligned_cols=113 Identities=23% Similarity=0.240 Sum_probs=91.9
Q ss_pred eeccCCCCCcceeEEEEEEEeec---CcEEEEEEcCCCCh-hHHHHHHHHHHH---------------------------
Q psy6828 46 SLSSNPDSDFRYSAIFTPIGIYK---GRIFAIKRIPKKSV-DITRAMKKELKI--------------------------- 94 (392)
Q Consensus 46 ~~~~~~lg~G~~g~V~~~~~~~~---~~~vAiK~~~~~~~-~~~~~~~~E~~~--------------------------- 94 (392)
+...+.||+|+||+||+|....+ ...||||.++.... .....+.+|+.+
T Consensus 6 ~~~~~~lg~g~~g~vy~~~~~~~~~~~~~vaik~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~iv~e 85 (266)
T cd05033 6 VTIEKVIGGGEFGEVCRGRLKLPGKKEIDVAIKTLKAGSSDKQRLDFLTEASIMGQFDHPNIIRLEGVVTKSRPVMIITE 85 (266)
T ss_pred ceeeeEecCCccceEEEEEEccCCCCcceEEEEEcCCCCChHHHHHHHHHHHHHHhCCCCCcceEeEEEecCCceEEEEE
Confidence 34466799999999999987654 45799999876543 334556777666
Q ss_pred --------HHhhcCCcCCCHHHHHHHHHHHHHHHHHHhcCCcccccCCCCCceEEcCCceEEEeccccchhcc
Q psy6828 95 --------DIMENEDVKLDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLVDSRWVVKLADFGLTEFKR 159 (392)
Q Consensus 95 --------~~l~~~~~~l~~~~~~~i~~qi~~~l~ylH~~~iiiHrDlKp~NIll~~~~~~kl~DFGla~~~~ 159 (392)
+++......+++..+..++.|++.||.|||+.++ +|+||||+||+++.++.+||+|||+++...
T Consensus 86 ~~~~~~L~~~~~~~~~~~~~~~~~~~~~~l~~~l~~Lh~~~i-~H~di~p~nili~~~~~~~l~dfg~~~~~~ 157 (266)
T cd05033 86 YMENGSLDKFLRENDGKFTVGQLVGMLRGIASGMKYLSEMNY-VHRDLAARNILVNSNLVCKVSDFGLSRRLE 157 (266)
T ss_pred cCCCCCHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHhCCc-ccCCCCcceEEEcCCCCEEECccchhhccc
Confidence 3333333468999999999999999999999999 999999999999999999999999988653
No 255
>cd07877 STKc_p38alpha_MAPK14 Catalytic domain of the Serine/Threonine Kinase, p38alpha Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38alpha subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38alpha subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38alpha, also called MAPK14
Probab=99.73 E-value=6.9e-18 Score=161.92 Aligned_cols=134 Identities=23% Similarity=0.332 Sum_probs=104.1
Q ss_pred ceeeeccCCCCCcceeEEEEEEEeecCcEEEEEEcCCCCh--hHHHHHHHHHHH-------------HHhh---------
Q psy6828 43 SQVSLSSNPDSDFRYSAIFTPIGIYKGRIFAIKRIPKKSV--DITRAMKKELKI-------------DIME--------- 98 (392)
Q Consensus 43 ~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~~--~~~~~~~~E~~~-------------~~l~--------- 98 (392)
...|...+.||+|+||.||++.+..+++.||+|++.+... ...+.+.+|+.+ ++..
T Consensus 16 ~~~y~~~~~lg~G~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~Ei~~l~~l~h~~iv~~~~~~~~~~~~~~~~ 95 (345)
T cd07877 16 PERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFN 95 (345)
T ss_pred cCceEEEEEeeecCCeEEEEEEEcCCCeEEEEEEecCcchhhHHHHHHHHHHHHHHHcCCCcccceeeeeeecccccccc
Confidence 3456667889999999999999999999999999975432 234456667665 0000
Q ss_pred ---------c-------CCcCCCHHHHHHHHHHHHHHHHHHhcCCcccccCCCCCceEEcCCceEEEeccccchhccccc
Q psy6828 99 ---------N-------EDVKLDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLVDSRWVVKLADFGLTEFKRDAE 162 (392)
Q Consensus 99 ---------~-------~~~~l~~~~~~~i~~qi~~~l~ylH~~~iiiHrDlKp~NIll~~~~~~kl~DFGla~~~~~~~ 162 (392)
. ....+++..+..++.|++.||.|||+.++ +||||||+||++++++.+||+|||+++......
T Consensus 96 ~~~lv~~~~~~~L~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~i-vH~dlkp~NIll~~~~~~kl~dfg~~~~~~~~~ 174 (345)
T cd07877 96 DVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADI-IHRDLKPSNLAVNEDCELKILDFGLARHTDDEM 174 (345)
T ss_pred cEEEEehhcccCHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCe-eecCCChHHEEEcCCCCEEEecccccccccccc
Confidence 0 01248899999999999999999999999 999999999999999999999999987532211
Q ss_pred ---------------------cccccccceeeeeee
Q psy6828 163 ---------------------YTGTDQHSFLQHTYH 177 (392)
Q Consensus 163 ---------------------~~~~d~~s~g~~~~~ 177 (392)
....|+||+|+++|+
T Consensus 175 ~~~~~~~~y~aPE~~~~~~~~~~~~DvwslG~il~e 210 (345)
T cd07877 175 TGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAE 210 (345)
T ss_pred cccccCCCccCHHHHhCccCCCchhhHHHHHHHHHH
Confidence 123589999988888
No 256
>cd05580 STKc_PKA Catalytic domain of the Protein Serine/Threonine Kinase, cAMP-dependent protein kinase. Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This subfamily is composed of the cAMP-dependent proteins kinases, PKA and PRKX. The inactive PKA holoenzyme is a heterotetramer composed of two phosphorylated and active catalytic (C) subunits with a dimer of regulatory (R) subunits. Activation is achieved through the binding of the important second messenger cAMP to the R subunits, which leads to the dissociation of PKA into the R dimer and two active C subunits. PKA is present ubi
Probab=99.73 E-value=5.5e-18 Score=158.43 Aligned_cols=111 Identities=18% Similarity=0.255 Sum_probs=92.4
Q ss_pred eccCCCCCcceeEEEEEEEeecCcEEEEEEcCCCCh---hHHHHHHHHHHH-----------------------------
Q psy6828 47 LSSNPDSDFRYSAIFTPIGIYKGRIFAIKRIPKKSV---DITRAMKKELKI----------------------------- 94 (392)
Q Consensus 47 ~~~~~lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~~---~~~~~~~~E~~~----------------------------- 94 (392)
...+.||+|+||.||++.+..+++.||+|.+.+... ...+.+.+|+.+
T Consensus 4 ~~~~~ig~g~~~~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~~ 83 (290)
T cd05580 4 EFIKTLGTGSFGRVMLVRHKGSGKYYALKILSKAKIVKLKQVEHVLNEKRILQSIRHPFLVNLYGSFQDDSNLYLVMEYV 83 (290)
T ss_pred EEEEEeecCCCeEEEEEEEcCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCccceeeEEEcCCeEEEEEecC
Confidence 345679999999999999999999999999875432 334566777766
Q ss_pred ------HHhhcCCcCCCHHHHHHHHHHHHHHHHHHhcCCcccccCCCCCceEEcCCceEEEeccccchhcc
Q psy6828 95 ------DIMENEDVKLDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLVDSRWVVKLADFGLTEFKR 159 (392)
Q Consensus 95 ------~~l~~~~~~l~~~~~~~i~~qi~~~l~ylH~~~iiiHrDlKp~NIll~~~~~~kl~DFGla~~~~ 159 (392)
+++... ..+++..+..++.|++.||.|||++++ +|+||||+||+++.++.+||+|||+++...
T Consensus 84 ~~~~L~~~~~~~-~~l~~~~~~~~~~qil~~l~~lH~~~i-~H~dl~p~nili~~~~~~kl~dfg~~~~~~ 152 (290)
T cd05580 84 PGGELFSHLRKS-GRFPEPVARFYAAQVVLALEYLHSLDI-VYRDLKPENLLLDSDGYIKITDFGFAKRVK 152 (290)
T ss_pred CCCCHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHHCCE-ecCCCCHHHEEECCCCCEEEeeCCCccccC
Confidence 222222 368999999999999999999999999 999999999999999999999999987643
No 257
>KOG1095|consensus
Probab=99.73 E-value=6.2e-18 Score=175.13 Aligned_cols=130 Identities=25% Similarity=0.313 Sum_probs=106.8
Q ss_pred eccCCCCCcceeEEEEEEEeecCc-----EEEEEEcCCCC-hhHHHHHHHHHHH--------------------------
Q psy6828 47 LSSNPDSDFRYSAIFTPIGIYKGR-----IFAIKRIPKKS-VDITRAMKKELKI-------------------------- 94 (392)
Q Consensus 47 ~~~~~lg~G~~g~V~~~~~~~~~~-----~vAiK~~~~~~-~~~~~~~~~E~~~-------------------------- 94 (392)
...+.||+|.||.||.|....... .||||.+.+.. .+..+.|.+|..+
T Consensus 695 ~l~~~lG~G~FG~VY~g~~~~~~~~~~~~~vaiK~l~~~~~~~~~~~Fl~Ea~~m~~f~HpNiv~liGv~l~~~~~~i~l 774 (1025)
T KOG1095|consen 695 TLLRVLGKGAFGEVYEGTYSDVPGSVSPIQVAVKSLKRLSSEQEVSDFLKEALLMSKFDHPNIVSLIGVCLDSGPPLILL 774 (1025)
T ss_pred EeeeeeccccccceEEEEEecCCCCccceEEEEEeccccCCHHHHHHHHHHHHHHhcCCCcceeeEEEeecCCCCcEEEe
Confidence 447899999999999998664332 49999997653 4677889999888
Q ss_pred HHhhc---------C------CcCCCHHHHHHHHHHHHHHHHHHhcCCcccccCCCCCceEEcCCceEEEeccccchhcc
Q psy6828 95 DIMEN---------E------DVKLDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLVDSRWVVKLADFGLTEFKR 159 (392)
Q Consensus 95 ~~l~~---------~------~~~l~~~~~~~i~~qi~~~l~ylH~~~iiiHrDlKp~NIll~~~~~~kl~DFGla~~~~ 159 (392)
+||+. . ...++-.+...++.||++|+.||++++. |||||..+|+||+.+..+||+|||+|+.+-
T Consensus 775 eyM~gGDL~sflr~~r~~~~~~~~L~~~dLl~~a~dvA~G~~YLe~~~f-vHRDLAaRNCLL~~~r~VKIaDFGlArDiy 853 (1025)
T KOG1095|consen 775 EYMEGGDLLSFLRESRPAPFQPSNLSMRDLLAFALDVAKGMNYLESKHF-VHRDLAARNCLLDERRVVKIADFGLARDIY 853 (1025)
T ss_pred hhcccCcHHHHHHhcccccCCCCCCCHHHHHHHHHHHhhhhHHHHhCCC-cCcchhhhheeecccCcEEEcccchhHhhh
Confidence 44443 3 3368899999999999999999999999 999999999999999999999999999432
Q ss_pred ccc-------------------------cccccccceeeeeee
Q psy6828 160 DAE-------------------------YTGTDQHSFLQHTYH 177 (392)
Q Consensus 160 ~~~-------------------------~~~~d~~s~g~~~~~ 177 (392)
... .+++|+||||+++||
T Consensus 854 ~~~yyr~~~~a~lPvkWm~PEsl~d~iFtskSDvWsFGVllWE 896 (1025)
T KOG1095|consen 854 DKDYYRKHGEAMLPVKWMPPESLKDGIFTSKSDVWSFGVLLWE 896 (1025)
T ss_pred hchheeccCccccceecCCHHHHhhcccccccchhhhHHHHHH
Confidence 211 134599999999999
No 258
>cd06635 STKc_TAO1 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 1. Serine/threonine kinases (STKs), thousand-and-one amino acids 1 (TAO1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO1 is sometimes referred to as prostate-derived sterile 20-like kinase 2 (PSK2). TAO1 activates the p38 MAPK through direct interaction with and activation of MEK3. TAO1 is highly expressed in the brain and may play a role in neuron
Probab=99.73 E-value=1.5e-17 Score=157.59 Aligned_cols=131 Identities=24% Similarity=0.318 Sum_probs=105.2
Q ss_pred eeccCCCCCcceeEEEEEEEeecCcEEEEEEcCCCCh---hHHHHHHHHHHH----------------------------
Q psy6828 46 SLSSNPDSDFRYSAIFTPIGIYKGRIFAIKRIPKKSV---DITRAMKKELKI---------------------------- 94 (392)
Q Consensus 46 ~~~~~~lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~~---~~~~~~~~E~~~---------------------------- 94 (392)
|...+.||+|+||.||++.+..+++.||+|.+..... ...+.+.+|+.+
T Consensus 27 f~~~~~lg~G~~~~v~~~~~~~~~~~valK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~ 106 (317)
T cd06635 27 FTDLREIGHGSFGAVYFARDVRTNEVVAIKKMSYSGKQSNEKWQDIIKEVKFLQRIKHPNSIEYKGCYLREHTAWLVMEY 106 (317)
T ss_pred hhhhheeccCCCeEEEEEEEcCCCcEEEEEEEecCCCCchHHHHHHHHHHHHHHhCCCCCEEEEEEEEeeCCeEEEEEeC
Confidence 5567789999999999999999999999999875432 334567777766
Q ss_pred ------HHhhcCCcCCCHHHHHHHHHHHHHHHHHHhcCCcccccCCCCCceEEcCCceEEEeccccchhcccc-------
Q psy6828 95 ------DIMENEDVKLDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLVDSRWVVKLADFGLTEFKRDA------- 161 (392)
Q Consensus 95 ------~~l~~~~~~l~~~~~~~i~~qi~~~l~ylH~~~iiiHrDlKp~NIll~~~~~~kl~DFGla~~~~~~------- 161 (392)
+++......+++.++..++.|++.||.|||++++ +||||||+||+++.++.+||+|||++......
T Consensus 107 ~~g~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~i-~H~dL~p~Nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~ 185 (317)
T cd06635 107 CLGSASDLLEVHKKPLQEVEIAAITHGALQGLAYLHSHNM-IHRDIKAGNILLTEPGQVKLADFGSASIASPANSFVGTP 185 (317)
T ss_pred CCCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCc-ccCCCCcccEEECCCCCEEEecCCCccccCCcccccCCc
Confidence 2222333468999999999999999999999999 99999999999999999999999987643211
Q ss_pred ---------------ccccccccceeeeeee
Q psy6828 162 ---------------EYTGTDQHSFLQHTYH 177 (392)
Q Consensus 162 ---------------~~~~~d~~s~g~~~~~ 177 (392)
.....|+||+|+++|+
T Consensus 186 ~y~aPE~~~~~~~~~~~~~~Dv~slGvil~e 216 (317)
T cd06635 186 YWMAPEVILAMDEGQYDGKVDVWSLGITCIE 216 (317)
T ss_pred cccChhhhhcCCCCCCCccccHHHHHHHHHH
Confidence 1123499999999998
No 259
>KOG0696|consensus
Probab=99.73 E-value=6.7e-19 Score=162.68 Aligned_cols=150 Identities=20% Similarity=0.224 Sum_probs=109.1
Q ss_pred cCCCCCcceeEEEEEEEeecCcEEEEEEcCCCChh---HHHHHHHHHHH---------------------------HHhh
Q psy6828 49 SNPDSDFRYSAIFTPIGIYKGRIFAIKRIPKKSVD---ITRAMKKELKI---------------------------DIME 98 (392)
Q Consensus 49 ~~~lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~~~---~~~~~~~E~~~---------------------------~~l~ 98 (392)
...||+|+||+|.++..+.+.+.||||++++.-+- ..+--..|-.+ +|..
T Consensus 354 l~VlGKGSFGKVlLaerkgtdELyAiKiLkKDViiQdDDvectm~EKrvLAL~~kppFL~qlHScFQTmDRLyFVMEyvn 433 (683)
T KOG0696|consen 354 LMVLGKGSFGKVLLAERKGTDELYAIKILKKDVIIQDDDVECTMVEKRVLALPGKPPFLVQLHSCFQTMDRLYFVMEYVN 433 (683)
T ss_pred EEEeccCccceeeeecccCcchhhhhhhhccceeeecCcccceehhhhheecCCCCchHHHHHHHhhhhhheeeEEEEec
Confidence 34699999999999999999999999999875431 11111222222 2332
Q ss_pred cCC--------cCCCHHHHHHHHHHHHHHHHHHhcCCcccccCCCCCceEEcCCceEEEeccccchhccccccccccccc
Q psy6828 99 NED--------VKLDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLVDSRWVVKLADFGLTEFKRDAEYTGTDQHS 170 (392)
Q Consensus 99 ~~~--------~~l~~~~~~~i~~qi~~~l~ylH~~~iiiHrDlKp~NIll~~~~~~kl~DFGla~~~~~~~~~~~d~~s 170 (392)
.++ +++.+..+..++.+|+-||-|||+++| |.||||.+|+||+.+|++||+|||+++.--.... +.-.-
T Consensus 434 GGDLMyhiQQ~GkFKEp~AvFYAaEiaigLFFLh~kgI-iYRDLKLDNvmLd~eGHiKi~DFGmcKEni~~~~--TTkTF 510 (683)
T KOG0696|consen 434 GGDLMYHIQQVGKFKEPVAVFYAAEIAIGLFFLHSKGI-IYRDLKLDNVMLDSEGHIKIADFGMCKENIFDGV--TTKTF 510 (683)
T ss_pred CchhhhHHHHhcccCCchhhhhhHHHHHHhhhhhcCCe-eeeeccccceEeccCCceEeeecccccccccCCc--ceeee
Confidence 222 268999999999999999999999999 9999999999999999999999999985322211 11123
Q ss_pred eeeeeeeccC----CCCcccccccccchhhhccCC
Q psy6828 171 FLQHTYHVNR----AGSTESLHCKCDEALLFEMLP 201 (392)
Q Consensus 171 ~g~~~~~~~~----~~~~~~~d~~~~~~lL~~~lp 201 (392)
.|++-|.+|+ .++..++|+|+.+.+|++|+.
T Consensus 511 CGTPdYiAPEIi~YqPYgksvDWWa~GVLLyEmla 545 (683)
T KOG0696|consen 511 CGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLA 545 (683)
T ss_pred cCCCcccccceEEecccccchhHHHHHHHHHHHHc
Confidence 4666666666 445556677777777776664
No 260
>cd05113 PTKc_Btk_Bmx Catalytic domain of the Protein Tyrosine Kinases, Bruton's tyrosine kinase and Bone marrow kinase on the X chromosome. Protein Tyrosine Kinase (PTK) family; Bruton's tyrosine kinase (Btk) and Bone marrow kinase on the X chromosome (Bmx); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Btk and Bmx (also named Etk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds
Probab=99.73 E-value=8.7e-18 Score=154.15 Aligned_cols=109 Identities=24% Similarity=0.345 Sum_probs=88.3
Q ss_pred eccCCCCCcceeEEEEEEEeecCcEEEEEEcCCCChhHHHHHHHHHHH--------------------------------
Q psy6828 47 LSSNPDSDFRYSAIFTPIGIYKGRIFAIKRIPKKSVDITRAMKKELKI-------------------------------- 94 (392)
Q Consensus 47 ~~~~~lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~~~~~~~~~~E~~~-------------------------------- 94 (392)
.....+|+|+||.||.+... .+..+|+|.+...... .+.+.+|+.+
T Consensus 7 ~~~~~lg~G~~~~vy~~~~~-~~~~~aik~~~~~~~~-~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~ 84 (256)
T cd05113 7 TFLKELGTGQFGVVKYGKWR-GQYDVAIKMIKEGSMS-EDEFIEEAKVMMKLSHEKLVQLYGVCTKQRPIYIVTEYMSNG 84 (256)
T ss_pred EEeeEecCcccceEEEEEec-CCCcEEEEEcCCCccc-HHHHHHHHHHHhcCCCCCeeeEEEEEccCCCcEEEEEcCCCC
Confidence 34467999999999999754 3456999998765433 3457777776
Q ss_pred ---HHhhcCCcCCCHHHHHHHHHHHHHHHHHHhcCCcccccCCCCCceEEcCCceEEEeccccchhc
Q psy6828 95 ---DIMENEDVKLDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLVDSRWVVKLADFGLTEFK 158 (392)
Q Consensus 95 ---~~l~~~~~~l~~~~~~~i~~qi~~~l~ylH~~~iiiHrDlKp~NIll~~~~~~kl~DFGla~~~ 158 (392)
+++......+++.++..++.|++.||.|||++++ +|+||||+||+++.++.+||+|||+++..
T Consensus 85 ~l~~~i~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i-~H~dl~p~nili~~~~~~kl~d~g~~~~~ 150 (256)
T cd05113 85 CLLNYLREHGKRFQPSQLLEMCKDVCEGMAYLESKQF-IHRDLAARNCLVDDQGCVKVSDFGLSRYV 150 (256)
T ss_pred cHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCe-eccccCcceEEEcCCCCEEECCCccceec
Confidence 3333333368999999999999999999999999 99999999999999999999999988754
No 261
>cd05082 PTKc_Csk Catalytic domain of the Protein Tyrosine Kinase, C-terminal Src kinase. Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk catalyzes the tyr phosphorylation of the regulatory C-terminal tail of Src kinases, re
Probab=99.73 E-value=8.3e-18 Score=154.09 Aligned_cols=126 Identities=23% Similarity=0.283 Sum_probs=96.9
Q ss_pred eccCCCCCcceeEEEEEEEeecCcEEEEEEcCCCChhHHHHHHHHHHH--------------------------------
Q psy6828 47 LSSNPDSDFRYSAIFTPIGIYKGRIFAIKRIPKKSVDITRAMKKELKI-------------------------------- 94 (392)
Q Consensus 47 ~~~~~lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~~~~~~~~~~E~~~-------------------------------- 94 (392)
...+.+|+|+||.||++.. .|+.||+|.+..... .+.+.+|+.+
T Consensus 9 ~~~~~lg~g~~~~v~~~~~--~~~~~~~k~~~~~~~--~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~lv~e~~~~ 84 (256)
T cd05082 9 KLLQTIGKGEFGDVMLGDY--RGNKVAVKCIKNDAT--AQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVTEYMAK 84 (256)
T ss_pred eeeeeecccCCCeEEEEEE--cCCcEEEEEeCCCch--HHHHHHHHHHHHhCCCCCeeeEEEEEEcCCCceEEEEECCCC
Confidence 3456799999999999964 488999999865432 3456677665
Q ss_pred ----HHhhc-CCcCCCHHHHHHHHHHHHHHHHHHhcCCcccccCCCCCceEEcCCceEEEeccccchhccccc-------
Q psy6828 95 ----DIMEN-EDVKLDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLVDSRWVVKLADFGLTEFKRDAE------- 162 (392)
Q Consensus 95 ----~~l~~-~~~~l~~~~~~~i~~qi~~~l~ylH~~~iiiHrDlKp~NIll~~~~~~kl~DFGla~~~~~~~------- 162 (392)
+++.. ....+++..+..++.|++.||.|||++++ +||||||+||++++++.+||+|||+++......
T Consensus 85 ~~L~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i-~H~dlkp~nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~ 163 (256)
T cd05082 85 GSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEANNF-VHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQDTGKLPV 163 (256)
T ss_pred CcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCE-eccccchheEEEcCCCcEEecCCccceeccccCCCCccce
Confidence 33322 22247889999999999999999999999 999999999999999999999999987543211
Q ss_pred -------------cccccccceeeeeee
Q psy6828 163 -------------YTGTDQHSFLQHTYH 177 (392)
Q Consensus 163 -------------~~~~d~~s~g~~~~~ 177 (392)
...+|+||+|+++|+
T Consensus 164 ~y~aPE~~~~~~~~~~~Dv~slG~i~~~ 191 (256)
T cd05082 164 KWTAPEALREKKFSTKSDVWSFGILLWE 191 (256)
T ss_pred eecCHHHHccCCCCchhhhHHHHHHHHH
Confidence 112477777777776
No 262
>cd05076 PTK_Tyk2_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalyt
Probab=99.73 E-value=6.6e-18 Score=156.67 Aligned_cols=106 Identities=20% Similarity=0.220 Sum_probs=82.6
Q ss_pred CCCCcceeEEEEEEEeecC------------------------cEEEEEEcCCCChhHHHHHHHHHHH------------
Q psy6828 51 PDSDFRYSAIFTPIGIYKG------------------------RIFAIKRIPKKSVDITRAMKKELKI------------ 94 (392)
Q Consensus 51 ~lg~G~~g~V~~~~~~~~~------------------------~~vAiK~~~~~~~~~~~~~~~E~~~------------ 94 (392)
.||+|+||.||+|....++ ..||+|.+..........+..|..+
T Consensus 2 ~lG~G~~~~vy~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~k~~~~~~~~~~~~~~~~~~~~~~l~h~niv~~ 81 (274)
T cd05076 2 HLGQGTRTNIYDGRLRVEGGGEPEEDEMEDEDPLVEGNNNGRELRVVLKVLDPSHRDIALAFFETASLMSQVSHIHLAFV 81 (274)
T ss_pred CcCcccccceecceeEeccCCCCcccccccccccccccCCCeeeeEEEEecChHHHHHHHHHHHHHHHHhcCCCCCeeeE
Confidence 4899999999999854322 3589999976554444556666654
Q ss_pred -----------------------HHhhcCCcCCCHHHHHHHHHHHHHHHHHHhcCCcccccCCCCCceEEcCCc------
Q psy6828 95 -----------------------DIMENEDVKLDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLVDSRW------ 145 (392)
Q Consensus 95 -----------------------~~l~~~~~~l~~~~~~~i~~qi~~~l~ylH~~~iiiHrDlKp~NIll~~~~------ 145 (392)
.++......+++..+..++.|++.||.|||++++ +||||||+|||++..+
T Consensus 82 ~~~~~~~~~~~lv~ey~~~g~L~~~l~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~i-iH~dlkp~Nill~~~~~~~~~~ 160 (274)
T cd05076 82 HGVCVRGSENIMVEEFVEHGPLDVCLRKEKGRVPVAWKITVAQQLASALSYLEDKNL-VHGNVCAKNILLARLGLAEGTS 160 (274)
T ss_pred EEEEEeCCceEEEEecCCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHcCCc-cCCCCCcccEEEeccCcccCcc
Confidence 3333334468999999999999999999999999 9999999999997643
Q ss_pred -eEEEeccccchh
Q psy6828 146 -VVKLADFGLTEF 157 (392)
Q Consensus 146 -~~kl~DFGla~~ 157 (392)
.+|++|||++..
T Consensus 161 ~~~kl~d~g~~~~ 173 (274)
T cd05076 161 PFIKLSDPGVSFT 173 (274)
T ss_pred ceeeecCCccccc
Confidence 489999998754
No 263
>KOG0670|consensus
Probab=99.73 E-value=1.5e-17 Score=157.69 Aligned_cols=134 Identities=23% Similarity=0.323 Sum_probs=107.7
Q ss_pred cceeeeccCCCCCcceeEEEEEEEeecCcEEEEEEcCCCChhHHHHHHHHHHH---------------------------
Q psy6828 42 TSQVSLSSNPDSDFRYSAIFTPIGIYKGRIFAIKRIPKKSVDITRAMKKELKI--------------------------- 94 (392)
Q Consensus 42 ~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~~~~~~~~~~E~~~--------------------------- 94 (392)
...+|......|+|=|++|..|.+...|+.||||++..+.. ..+.=+.|+++
T Consensus 430 LD~RY~V~~~~GkGvFs~Vvra~D~~r~~~vAiKIIRnNE~-M~KtGl~EleiLkKL~~AD~Edk~Hclrl~r~F~hknH 508 (752)
T KOG0670|consen 430 LDSRYEVQGYTGKGVFSTVVRARDQARGQEVAIKIIRNNEV-MHKTGLKELEILKKLNDADPEDKFHCLRLFRHFKHKNH 508 (752)
T ss_pred hcceeEEEeccccceeeeeeeccccCCCCeeEEEEeecchH-HhhhhhHHHHHHHHhhccCchhhhHHHHHHHHhhhcce
Confidence 47889999999999999999999999999999999986643 12223344444
Q ss_pred -------------HHhhc--CCcCCCHHHHHHHHHHHHHHHHHHhcCCcccccCCCCCceEEcCC-ceEEEeccccchhc
Q psy6828 95 -------------DIMEN--EDVKLDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLVDSR-WVVKLADFGLTEFK 158 (392)
Q Consensus 95 -------------~~l~~--~~~~l~~~~~~~i~~qi~~~l~ylH~~~iiiHrDlKp~NIll~~~-~~~kl~DFGla~~~ 158 (392)
++++. .+..|....+..|+.|++.||..|-.+|+ +|.||||.|||++.. ..+||||||.|.+.
T Consensus 509 LClVFE~LslNLRevLKKyG~nvGL~ikaVRsYaqQLflALklLK~c~v-lHaDIKPDNiLVNE~k~iLKLCDfGSA~~~ 587 (752)
T KOG0670|consen 509 LCLVFEPLSLNLREVLKKYGRNVGLHIKAVRSYAQQLFLALKLLKKCGV-LHADIKPDNILVNESKNILKLCDFGSASFA 587 (752)
T ss_pred eEEEehhhhchHHHHHHHhCcccceeehHHHHHHHHHHHHHHHHHhcCe-eecccCccceEeccCcceeeeccCcccccc
Confidence 33332 12247778899999999999999999999 999999999999876 56899999999877
Q ss_pred cccccc---------------------cccccceeeeeee
Q psy6828 159 RDAEYT---------------------GTDQHSFLQHTYH 177 (392)
Q Consensus 159 ~~~~~~---------------------~~d~~s~g~~~~~ 177 (392)
..+..+ ..|+||.||++||
T Consensus 588 ~eneitPYLVSRFYRaPEIiLG~~yd~~iD~WSvgctLYE 627 (752)
T KOG0670|consen 588 SENEITPYLVSRFYRAPEIILGLPYDYPIDTWSVGCTLYE 627 (752)
T ss_pred ccccccHHHHHHhccCcceeecCcccCCccceeeceeeEE
Confidence 665533 2399999999999
No 264
>cd05609 STKc_MAST Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine kinase. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. There are four mammalian MAST kinases, named MAST1-MAST4. MAST1 is also referred to as syntrophin-associated STK (SAST), while MAST2 is also called MAST205. MAST kinases are cytoskeletal associated kinases of unknown function that a
Probab=99.73 E-value=1.1e-17 Score=157.58 Aligned_cols=108 Identities=26% Similarity=0.348 Sum_probs=90.5
Q ss_pred ccCCCCCcceeEEEEEEEeecCcEEEEEEcCCCCh---hHHHHHHHHHHH------------------------------
Q psy6828 48 SSNPDSDFRYSAIFTPIGIYKGRIFAIKRIPKKSV---DITRAMKKELKI------------------------------ 94 (392)
Q Consensus 48 ~~~~lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~~---~~~~~~~~E~~~------------------------------ 94 (392)
..+.+|+|+||.||++.+..+++.||+|.+.+... ...+.+.+|+.+
T Consensus 5 ~~~~l~~g~~~~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~e~~~ 84 (305)
T cd05609 5 TIKLISNGAYGAVYLVRHKETRQRFAMKKINKQNLILRNQIQQVFVERDILTFAENPFVVSMFCSFETKRHLCMVMEYVE 84 (305)
T ss_pred EeeEeecCCCeeEEEEEECCCCcEEEEEEeehhhhhhHHHHHHHHHHHHHHHhCCCCCeeeeEEEEecCCEEEEEEecCC
Confidence 34679999999999999999999999999876543 234456677666
Q ss_pred -----HHhhcCCcCCCHHHHHHHHHHHHHHHHHHhcCCcccccCCCCCceEEcCCceEEEeccccchh
Q psy6828 95 -----DIMENEDVKLDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLVDSRWVVKLADFGLTEF 157 (392)
Q Consensus 95 -----~~l~~~~~~l~~~~~~~i~~qi~~~l~ylH~~~iiiHrDlKp~NIll~~~~~~kl~DFGla~~ 157 (392)
+++++. ..+++..+..++.|++.||.|||+.++ +||||||+||+++.++.+|++|||+++.
T Consensus 85 g~~L~~~l~~~-~~~~~~~~~~~~~~i~~~l~~lH~~~i-~H~dl~p~NIll~~~~~~~l~dfg~~~~ 150 (305)
T cd05609 85 GGDCATLLKNI-GALPVDMARMYFAETVLALEYLHNYGI-VHRDLKPDNLLITSMGHIKLTDFGLSKI 150 (305)
T ss_pred CCcHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHHCCc-cccCCchHHEEECCCCCEEEeeCCCccc
Confidence 333332 358999999999999999999999999 9999999999999999999999998863
No 265
>cd05078 PTK_Jak2_Jak3_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3. Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity
Probab=99.73 E-value=2.4e-18 Score=158.06 Aligned_cols=108 Identities=18% Similarity=0.239 Sum_probs=86.1
Q ss_pred CCCCCcceeEEEEEEEeecCc-------EEEEEEcCCCChhHHHHHHHHHHH----------------------------
Q psy6828 50 NPDSDFRYSAIFTPIGIYKGR-------IFAIKRIPKKSVDITRAMKKELKI---------------------------- 94 (392)
Q Consensus 50 ~~lg~G~~g~V~~~~~~~~~~-------~vAiK~~~~~~~~~~~~~~~E~~~---------------------------- 94 (392)
+.||+|+||.||++.+..++. .||+|.+........+.+..|..+
T Consensus 1 ~~lg~G~~~~Vy~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~~~h~~iv~~~~~~~~~~~~~lv~e~ 80 (258)
T cd05078 1 ESLGQGTFTKIFKGIRREVGDYGELHKTEVLLKVLDKSHRNYSESFFEAASMMSQLSHKHLVLNYGVCVCGDESIMVQEY 80 (258)
T ss_pred CCCCcccchhheeeeecccccccccccchhhHHhhcchhHHHHHHHHHHHHHHHhCCCCChhheeeEEEeCCCcEEEEec
Confidence 368999999999998765443 489999876554555566666655
Q ss_pred -------HHhhcCCcCCCHHHHHHHHHHHHHHHHHHhcCCcccccCCCCCceEEcCCce--------EEEeccccchhc
Q psy6828 95 -------DIMENEDVKLDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLVDSRWV--------VKLADFGLTEFK 158 (392)
Q Consensus 95 -------~~l~~~~~~l~~~~~~~i~~qi~~~l~ylH~~~iiiHrDlKp~NIll~~~~~--------~kl~DFGla~~~ 158 (392)
+++......+++..+..++.|++.||.|||++++ +||||||+||+++.++. ++++|||++...
T Consensus 81 ~~~g~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i-iH~dlkp~nili~~~~~~~~~~~~~~~l~d~g~~~~~ 158 (258)
T cd05078 81 VKFGSLDTYLKKNKNLINISWKLEVAKQLAWALHFLEDKGL-THGNVCAKNVLLIREEDRKTGNPPFIKLSDPGISITV 158 (258)
T ss_pred CCCCcHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCe-ecCCCccceEEEecccccccCCCceEEeccccccccc
Confidence 4444434368999999999999999999999999 99999999999987754 699999988643
No 266
>cd05048 PTKc_Ror Catalytic Domain of the Protein Tyrosine Kinases, Receptor tyrosine kinase-like Orphan Receptors. Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor (Ror) subfamily; catalytic (c) domain. The Ror subfamily consists of Ror1, Ror2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimer
Probab=99.73 E-value=1.9e-17 Score=153.98 Aligned_cols=111 Identities=22% Similarity=0.327 Sum_probs=89.4
Q ss_pred eccCCCCCcceeEEEEEEEeecC-----cEEEEEEcCCCCh-hHHHHHHHHHHH--------------------------
Q psy6828 47 LSSNPDSDFRYSAIFTPIGIYKG-----RIFAIKRIPKKSV-DITRAMKKELKI-------------------------- 94 (392)
Q Consensus 47 ~~~~~lg~G~~g~V~~~~~~~~~-----~~vAiK~~~~~~~-~~~~~~~~E~~~-------------------------- 94 (392)
...+.||+|+||.||++.....+ +.||+|.+..... .....+.+|+..
T Consensus 8 ~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~v~~K~~~~~~~~~~~~~~~~ei~~l~~l~h~~i~~~~~~~~~~~~~~~~~ 87 (283)
T cd05048 8 RFLEELGEGAFGKVYKGELTGPNERLSATSVAIKTLKENAEPKVQQEFRQEAELMSDLQHPNIVCLLGVCTKEQPTCMLF 87 (283)
T ss_pred chhhcccCccCCcEEEEEEecCCCCcceeeEEEEecccCCCHHHHHHHHHHHHHHHhcCCcccceEEEEEcCCCceEEEE
Confidence 34677999999999999876655 6899999975433 344567777765
Q ss_pred ---------HHhhcC---------------CcCCCHHHHHHHHHHHHHHHHHHhcCCcccccCCCCCceEEcCCceEEEe
Q psy6828 95 ---------DIMENE---------------DVKLDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLVDSRWVVKLA 150 (392)
Q Consensus 95 ---------~~l~~~---------------~~~l~~~~~~~i~~qi~~~l~ylH~~~iiiHrDlKp~NIll~~~~~~kl~ 150 (392)
+++... ...+++.++..++.|++.||.|||++++ +||||||+||++++++.+||+
T Consensus 88 e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~al~~lH~~~i-~H~dlkp~Nil~~~~~~~~L~ 166 (283)
T cd05048 88 EYLAHGDLHEFLVRNSPHSDVGAESGDETVKSSLDCSDFLHIAIQIAAGMEYLSSHHF-VHRDLAARNCLVGEGLTVKIS 166 (283)
T ss_pred ecCCCCcHHHHHHhcCCCcccccccccccccCCCCHHHHHHHHHHHHHHHHHHHhCCe-eccccccceEEEcCCCcEEEC
Confidence 222221 0347888899999999999999999999 999999999999999999999
Q ss_pred ccccchhc
Q psy6828 151 DFGLTEFK 158 (392)
Q Consensus 151 DFGla~~~ 158 (392)
|||+++..
T Consensus 167 dfg~~~~~ 174 (283)
T cd05048 167 DFGLSRDI 174 (283)
T ss_pred CCcceeec
Confidence 99998754
No 267
>cd05073 PTKc_Hck Catalytic domain of the Protein Tyrosine Kinase, Hematopoietic cell kinase. Protein Tyrosine Kinase (PTK) family; Hematopoietic cell kinase (Hck); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Hck is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pa
Probab=99.73 E-value=3.1e-17 Score=150.74 Aligned_cols=112 Identities=23% Similarity=0.327 Sum_probs=90.4
Q ss_pred eeeeccCCCCCcceeEEEEEEEeecCcEEEEEEcCCCChhHHHHHHHHHHH-----------------------------
Q psy6828 44 QVSLSSNPDSDFRYSAIFTPIGIYKGRIFAIKRIPKKSVDITRAMKKELKI----------------------------- 94 (392)
Q Consensus 44 ~~~~~~~~lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~~~~~~~~~~E~~~----------------------------- 94 (392)
..+...+.+|+|+||.||++. ...+..+|+|.+..... ..+.+.+|+.+
T Consensus 6 ~~~~~~~~lg~g~~~~vy~~~-~~~~~~~~iK~~~~~~~-~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~v~e~~~ 83 (260)
T cd05073 6 ESLKLEKKLGAGQFGEVWMAT-YNKHTKVAVKTMKPGSM-SVEAFLAEANVMKTLQHDKLVKLHAVVTKEPIYIITEFMA 83 (260)
T ss_pred cceeEEeEecCccceEEEEEE-ecCCccEEEEecCCChh-HHHHHHHHHHHHHhcCCCCcceEEEEEcCCCeEEEEEeCC
Confidence 345567789999999999997 44567899999876543 34567777766
Q ss_pred -----HHhhc-CCcCCCHHHHHHHHHHHHHHHHHHhcCCcccccCCCCCceEEcCCceEEEeccccchhc
Q psy6828 95 -----DIMEN-EDVKLDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLVDSRWVVKLADFGLTEFK 158 (392)
Q Consensus 95 -----~~l~~-~~~~l~~~~~~~i~~qi~~~l~ylH~~~iiiHrDlKp~NIll~~~~~~kl~DFGla~~~ 158 (392)
+++.. ....+++..+..++.|++.||.|||++++ +||||||+||+++.++.+||+|||++...
T Consensus 84 ~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~aL~~lH~~~i-~H~dl~p~ni~i~~~~~~~l~d~~~~~~~ 152 (260)
T cd05073 84 KGSLLDFLKSDEGSKQPLPKLIDFSAQIAEGMAFIEQRNY-IHRDLRAANILVSASLVCKIADFGLARVI 152 (260)
T ss_pred CCcHHHHHHhCCccccCHHHHHHHHHHHHHHHHHHHhCCc-cccccCcceEEEcCCCcEEECCCcceeec
Confidence 33322 23357888999999999999999999999 99999999999999999999999988654
No 268
>cd08224 STKc_Nek6_Nek7 Catalytic domain of the Protein Serine/Threonine Kinases, Never In Mitosis gene A-related kinase 6 and 7. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) and Nek7 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6/7 subfamily is part of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 and Nek7 are the shortest Neks, consisting only of the catalytic domain and a very short N-terminal extension. They show distinct expression patterns and both appear to be downstream substrates of Nek9. They are required for mitotic spindle formation and cytokinesis. They may a
Probab=99.73 E-value=1e-17 Score=154.12 Aligned_cols=112 Identities=19% Similarity=0.340 Sum_probs=92.2
Q ss_pred eeccCCCCCcceeEEEEEEEeecCcEEEEEEcCCCC---hhHHHHHHHHHHH----------------------------
Q psy6828 46 SLSSNPDSDFRYSAIFTPIGIYKGRIFAIKRIPKKS---VDITRAMKKELKI---------------------------- 94 (392)
Q Consensus 46 ~~~~~~lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~---~~~~~~~~~E~~~---------------------------- 94 (392)
|...+.+|+|+||.||++.+..+|+.||+|.++... ....+.+.+|+.+
T Consensus 4 y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~ei~~l~~~~~~~i~~~~~~~~~~~~~~lv~e~ 83 (267)
T cd08224 4 FKIEKKIGKGQFSVVYKAICLLDGRVVALKKVQIFEMMDAKARQDCLKEIDLLKQLDHPNVIKYLASFIENNELNIVLEL 83 (267)
T ss_pred eeeeeeeccCCceEEEEEEEcCCCCEEEEEEeecccccchhhHHHHHHHHHHHHhCCCCCeeeeeeeeecCCeEEEEEec
Confidence 445677999999999999999899999999886432 2334567777766
Q ss_pred -------HHhh---cCCcCCCHHHHHHHHHHHHHHHHHHhcCCcccccCCCCCceEEcCCceEEEeccccchhc
Q psy6828 95 -------DIME---NEDVKLDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLVDSRWVVKLADFGLTEFK 158 (392)
Q Consensus 95 -------~~l~---~~~~~l~~~~~~~i~~qi~~~l~ylH~~~iiiHrDlKp~NIll~~~~~~kl~DFGla~~~ 158 (392)
+++. .....+++.++..++.|++.||.|||+.++ +||||||+||+++.++.++++|||++...
T Consensus 84 ~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~i-~h~dl~p~nil~~~~~~~~l~d~~~~~~~ 156 (267)
T cd08224 84 ADAGDLSRMIKHFKKQKRLIPERTIWKYFVQLCSALEHMHSKRI-MHRDIKPANVFITATGVVKLGDLGLGRFF 156 (267)
T ss_pred CCCCCHHHHHHHhcccCCCcCHHHHHHHHHHHHHHHHHHHhCCE-ecCCcChhhEEECCCCcEEEeccceeeec
Confidence 2222 122358899999999999999999999999 99999999999999999999999998754
No 269
>cd05574 STKc_phototropin_like Catalytic domain of Phototropin-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Phototropin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The phototropin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Included in this subfamily are plant phototropins and predominantly uncharacterized fungal STKs whose catalytic domains resemble the phototropin kinase domain. One protein from Neurospora crassa is called nrc-2. Phototropins are blue-light receptors that control responses such as phototropism, stromatal opening, and chloroplast movement in order to optimize the photosynthetic efficiency of plants. They are light-activated STKs that contain an N-termin
Probab=99.73 E-value=1.1e-17 Score=158.18 Aligned_cols=112 Identities=21% Similarity=0.221 Sum_probs=93.0
Q ss_pred eeccCCCCCcceeEEEEEEEeecCcEEEEEEcCCCChh---HHHHHHHHHHH----------------------------
Q psy6828 46 SLSSNPDSDFRYSAIFTPIGIYKGRIFAIKRIPKKSVD---ITRAMKKELKI---------------------------- 94 (392)
Q Consensus 46 ~~~~~~lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~~~---~~~~~~~E~~~---------------------------- 94 (392)
|...+.+|+|+||.||++.+..+++.||+|.+.+.... ..+.+..|+.+
T Consensus 3 y~~~~~ig~g~~g~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~ 82 (316)
T cd05574 3 FKKIKLLGKGDVGRVFLVRLKGTGKLFALKVLDKKEMIKRNKVKRVLTEQEILATLDHPFLPTLYASFQTETYLCLVMDY 82 (316)
T ss_pred eEEeeeecCCccEEEEEEEEcCCCcEEEEEEEeccccchHHHHHHHHHHHHHHHhCCCCCchhheeeeecCCEEEEEEEe
Confidence 34456799999999999999989999999999876442 34556677665
Q ss_pred -------HHhhc-CCcCCCHHHHHHHHHHHHHHHHHHhcCCcccccCCCCCceEEcCCceEEEeccccchhc
Q psy6828 95 -------DIMEN-EDVKLDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLVDSRWVVKLADFGLTEFK 158 (392)
Q Consensus 95 -------~~l~~-~~~~l~~~~~~~i~~qi~~~l~ylH~~~iiiHrDlKp~NIll~~~~~~kl~DFGla~~~ 158 (392)
+++.. ....+++..+..++.|++.||.|||+.++ +|+||||+||+++.++.++|+|||++...
T Consensus 83 ~~~~~L~~~~~~~~~~~l~~~~~~~~~~qi~~~l~~lH~~~i-~H~dlkp~Nili~~~~~~~l~dfg~~~~~ 153 (316)
T cd05574 83 CPGGELFRLLQRQPGKCLSEEVARFYAAEVLLALEYLHLLGI-VYRDLKPENILLHESGHIMLSDFDLSKQS 153 (316)
T ss_pred cCCCCHHHHHHhCCCCccCHHHHHHHHHHHHHHHHHHHHCCe-eccCCChHHeEEcCCCCEEEeecchhhcc
Confidence 33332 22368999999999999999999999999 99999999999999999999999998754
No 270
>cd05611 STKc_Rim15_like Catalytic domain of fungal Rim15-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, fungal Rim15-like kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include Saccharomyces cerevisiae Rim15, Schizosaccharomyces pombe cek1, and similar fungal proteins. They contain a central catalytic domain, which contains an insert relative to MAST kinases. In addition, Rim15 contains a C-terminal signal receiver (REC) domain while cek1 contains an N-terminal PAS domain. Rim15 (or Rim15p) functions as a regulator of meiosis. It acts as a do
Probab=99.73 E-value=9.2e-18 Score=154.09 Aligned_cols=126 Identities=23% Similarity=0.321 Sum_probs=96.7
Q ss_pred CCCCCcceeEEEEEEEeecCcEEEEEEcCCCChh---HHHHHHHHHHH--------------------------------
Q psy6828 50 NPDSDFRYSAIFTPIGIYKGRIFAIKRIPKKSVD---ITRAMKKELKI-------------------------------- 94 (392)
Q Consensus 50 ~~lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~~~---~~~~~~~E~~~-------------------------------- 94 (392)
+++|+|+||.||+|.+..+++.||+|.+++.... ....+..|..+
T Consensus 2 ~~l~~g~~~~v~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~~~ 81 (260)
T cd05611 2 KPISKGAFGSVYLAKKRSTGDYFAIKVLKKSDMIAKNQVTNVKAERAIMMIQGESPYVAKLYYSFQSKDYLYLVMEYLNG 81 (260)
T ss_pred ccCCcCCCeeEEEEEecCCCCeEEEEEecchhhhHHHHHHHHHHHHHHHhhcCCCCCeeeeeeeEEcCCeEEEEEeccCC
Confidence 4689999999999999999999999999765432 12223333322
Q ss_pred ----HHhhcCCcCCCHHHHHHHHHHHHHHHHHHhcCCcccccCCCCCceEEcCCceEEEeccccchhcccc---------
Q psy6828 95 ----DIMENEDVKLDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLVDSRWVVKLADFGLTEFKRDA--------- 161 (392)
Q Consensus 95 ----~~l~~~~~~l~~~~~~~i~~qi~~~l~ylH~~~iiiHrDlKp~NIll~~~~~~kl~DFGla~~~~~~--------- 161 (392)
+++... ..+++..+..++.|++.||.|||+.++ +||||+|+||+++.++.+||+|||+++.....
T Consensus 82 ~~L~~~l~~~-~~~~~~~~~~i~~qi~~aL~~lH~~~i-~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~y 159 (260)
T cd05611 82 GDCASLIKTL-GGLPEDWAKQYIAEVVLGVEDLHQRGI-IHRDIKPENLLIDQTGHLKLTDFGLSRNGLENKKFVGTPDY 159 (260)
T ss_pred CCHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHHCCe-ecCCCCHHHeEECCCCcEEEeecccceeccccccCCCCcCc
Confidence 222222 258999999999999999999999999 99999999999999999999999988753211
Q ss_pred ----------ccccccccceeeeeee
Q psy6828 162 ----------EYTGTDQHSFLQHTYH 177 (392)
Q Consensus 162 ----------~~~~~d~~s~g~~~~~ 177 (392)
.....|+||+|+++|+
T Consensus 160 ~~pe~~~~~~~~~~~Dv~slG~il~~ 185 (260)
T cd05611 160 LAPETILGVGDDKMSDWWSLGCVIFE 185 (260)
T ss_pred cChhhhcCCCCcchhhhHHHHHHHHH
Confidence 0123488888888877
No 271
>cd05578 STKc_Yank1 Catalytic domain of the Protein Serine/Threonine Kinase, Yank1. Serine/Threonine Kinases (STKs), Yank1 or STK32A subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Yank1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily contains uncharacterized STKs with similarity to the human protein designated Yank1 or STK32A.
Probab=99.73 E-value=1e-17 Score=153.56 Aligned_cols=129 Identities=19% Similarity=0.251 Sum_probs=103.0
Q ss_pred eccCCCCCcceeEEEEEEEeecCcEEEEEEcCCCCh---hHHHHHHHHHHH-----------------------------
Q psy6828 47 LSSNPDSDFRYSAIFTPIGIYKGRIFAIKRIPKKSV---DITRAMKKELKI----------------------------- 94 (392)
Q Consensus 47 ~~~~~lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~~---~~~~~~~~E~~~----------------------------- 94 (392)
...+.+|.|+||.||++.+..+++.||+|.+.+... ...+.+.+|+..
T Consensus 3 ~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~ 82 (258)
T cd05578 3 ELLRVIGKGAFGKVCIVQKRDTKKMFAMKYMNKQKCVEKGSVRNVLNERRILQELNHPFLVNLWYSFQDEENMYLVVDLL 82 (258)
T ss_pred eEEEEeccCCCceEEEEEEccCCcEEEEEEEehhhhcchhHHHHHHHHHHHHHhCCCCChHHHHHhhcCCCeEEEEEeCC
Confidence 345679999999999999988999999999976432 345567777665
Q ss_pred ------HHhhcCCcCCCHHHHHHHHHHHHHHHHHHhcCCcccccCCCCCceEEcCCceEEEeccccchhccccc------
Q psy6828 95 ------DIMENEDVKLDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLVDSRWVVKLADFGLTEFKRDAE------ 162 (392)
Q Consensus 95 ------~~l~~~~~~l~~~~~~~i~~qi~~~l~ylH~~~iiiHrDlKp~NIll~~~~~~kl~DFGla~~~~~~~------ 162 (392)
+++... ..+++..+..++.|+++||.|||++++ +|+||||+||++++++.++|+|||++.......
T Consensus 83 ~~~~L~~~l~~~-~~l~~~~~~~~~~~i~~~l~~lh~~~i-~h~dl~~~nil~~~~~~~~l~d~~~~~~~~~~~~~~~~~ 160 (258)
T cd05578 83 LGGDLRYHLSQK-VKFSEEQVKFWICEIVLALEYLHSKGI-IHRDIKPDNILLDEQGHVHITDFNIATKVTPDTLTTSTS 160 (258)
T ss_pred CCCCHHHHHHhc-CCcCHHHHHHHHHHHHHHHHHHHhCCe-eccCCCHHHeEEcCCCCEEEeecccccccCCCccccccC
Confidence 222222 368999999999999999999999999 999999999999999999999999987543321
Q ss_pred ----------------cccccccceeeeeee
Q psy6828 163 ----------------YTGTDQHSFLQHTYH 177 (392)
Q Consensus 163 ----------------~~~~d~~s~g~~~~~ 177 (392)
....|+||+|+++|+
T Consensus 161 ~~~~y~~PE~~~~~~~~~~~Di~slG~~l~~ 191 (258)
T cd05578 161 GTPGYMAPEVLCRQGYSVAVDWWSLGVTAYE 191 (258)
T ss_pred CChhhcCHHHHcccCCCCcccchhhHHHHHH
Confidence 123488888888877
No 272
>PF07714 Pkinase_Tyr: Protein tyrosine kinase Protein kinase; unclassified specificity. Tyrosine kinase, catalytic domain; InterPro: IPR001245 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Tyrosine-protein kinases can transfer a phosphate group from ATP to a tyrosine residue in a protein. These enzymes can be divided into two main groups []: Receptor tyrosine kinases (RTK), which are transmembrane proteins involved in signal transduction; they play key roles in growth, differentiation, metabolism, adhesion, motility, death and oncogenesis []. RTKs are composed of 3 domains: an extracellular domain (binds ligand), a transmembrane (TM) domain, and an intracellular catalytic domain (phosphorylates substrate). The TM domain plays an important role in the dimerisation process necessary for signal transduction []. Cytoplasmic / non-receptor tyrosine kinases, which act as regulatory proteins, playing key roles in cell differentiation, motility, proliferation, and survival. For example, the Src-family of protein-tyrosine kinases []. ; GO: 0004672 protein kinase activity, 0006468 protein phosphorylation; PDB: 2HYY_C 1OPL_A 2V7A_A 2G2H_B 2G1T_A 3PYY_A 3CS9_D 2HZI_A 2E2B_A 2HIW_A ....
Probab=99.73 E-value=5.1e-18 Score=156.13 Aligned_cols=128 Identities=26% Similarity=0.336 Sum_probs=104.4
Q ss_pred cCCCCCcceeEEEEEEEe----ecCcEEEEEEcCCCC-hhHHHHHHHHHHH-----------------------------
Q psy6828 49 SNPDSDFRYSAIFTPIGI----YKGRIFAIKRIPKKS-VDITRAMKKELKI----------------------------- 94 (392)
Q Consensus 49 ~~~lg~G~~g~V~~~~~~----~~~~~vAiK~~~~~~-~~~~~~~~~E~~~----------------------------- 94 (392)
.+.||.|+||.||+|... ..+..|+||.++... ....+.+.+|++.
T Consensus 4 ~~~ig~G~fg~v~~~~~~~~~~~~~~~V~vk~~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~g~~~~~~~~~lv~e~~ 83 (259)
T PF07714_consen 4 IKQIGEGSFGKVYRAEWKQKDNDKNQPVAVKILKPSSSEEEEEEFLNEIQILRKLRHPNIVKLYGFCIENEPLFLVMEYC 83 (259)
T ss_dssp EEEEEEESSEEEEEEEEESTTTSSEEEEEEEEESTTSSHHHHHHHHHHHHHHHTHSBTTBE-EEEEEESSSSEEEEEE--
T ss_pred eeEEccCCCcEEEEEEEEcccCCCCEEEEEEEeccccccccceeeeeccccccccccccccccccccccccccccccccc
Confidence 346899999999999977 346789999996543 3457788888887
Q ss_pred ------HHhhcC-CcCCCHHHHHHHHHHHHHHHHHHhcCCcccccCCCCCceEEcCCceEEEeccccchhcccccc----
Q psy6828 95 ------DIMENE-DVKLDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLVDSRWVVKLADFGLTEFKRDAEY---- 163 (392)
Q Consensus 95 ------~~l~~~-~~~l~~~~~~~i~~qi~~~l~ylH~~~iiiHrDlKp~NIll~~~~~~kl~DFGla~~~~~~~~---- 163 (392)
+++... ...+++.+...|+.|++.||.|||++++ +|++|+|+||+++.++.+||+|||++........
T Consensus 84 ~~g~L~~~L~~~~~~~~~~~~~~~i~~~i~~~l~~Lh~~~i-iH~~l~~~nill~~~~~~Kl~~f~~~~~~~~~~~~~~~ 162 (259)
T PF07714_consen 84 PGGSLDDYLKSKNKEPLSEQQRLSIAIQIAEALSYLHSNNI-IHGNLSPSNILLDSNGQVKLSDFGLSRPISEKSKYKND 162 (259)
T ss_dssp TTEBHHHHHHHTCTTTSBHHHHHHHHHHHHHHHHHHHHTTE-EEST-SGGGEEEETTTEEEEESTTTGEETTTSSSEEES
T ss_pred ccccccccccccccccccccccccccccccccccccccccc-cccccccccccccccccccccccccccccccccccccc
Confidence 555555 4479999999999999999999999999 9999999999999999999999999886521110
Q ss_pred ---------------------ccccccceeeeeee
Q psy6828 164 ---------------------TGTDQHSFLQHTYH 177 (392)
Q Consensus 164 ---------------------~~~d~~s~g~~~~~ 177 (392)
..+|+||||+++||
T Consensus 163 ~~~~~~~~~~aPE~~~~~~~~~ksDVysfG~~l~e 197 (259)
T PF07714_consen 163 SSQQLPLRYLAPEVLKDGEYTKKSDVYSFGMLLYE 197 (259)
T ss_dssp TTSESGGGGS-HHHHHHSEESHHHHHHHHHHHHHH
T ss_pred ccccccccccccccccccccccccccccccccccc
Confidence 12399999999998
No 273
>KOG1025|consensus
Probab=99.73 E-value=1.6e-17 Score=164.94 Aligned_cols=130 Identities=24% Similarity=0.285 Sum_probs=109.5
Q ss_pred eccCCCCCcceeEEEEEEEeecCc----EEEEEEcCCCC-hhHHHHHHHHHHH---------------------------
Q psy6828 47 LSSNPDSDFRYSAIFTPIGIYKGR----IFAIKRIPKKS-VDITRAMKKELKI--------------------------- 94 (392)
Q Consensus 47 ~~~~~lg~G~~g~V~~~~~~~~~~----~vAiK~~~~~~-~~~~~~~~~E~~~--------------------------- 94 (392)
...+.||.|+||+||+|...-.|+ +||||++.... .+..+.+..|..+
T Consensus 699 kk~kvLGsgAfGtV~kGiw~Pege~vKipVaiKvl~~~t~~~~s~e~LdeAl~masldHpnl~RLLgvc~~s~~qlvtq~ 778 (1177)
T KOG1025|consen 699 KKDKVLGSGAFGTVYKGIWIPEGENVKIPVAIKVLIEFTSPKASIELLDEALRMASLDHPNLLRLLGVCMLSTLQLVTQL 778 (1177)
T ss_pred hhhceeccccceeEEeeeEecCCceecceeEEEEeeccCCchhhHHHHHHHHHHhcCCCchHHHHhhhcccchHHHHHHh
Confidence 346789999999999999876665 68999986543 3445667777665
Q ss_pred -------HHhhcCCcCCCHHHHHHHHHHHHHHHHHHhcCCcccccCCCCCceEEcCCceEEEeccccchhccccccc---
Q psy6828 95 -------DIMENEDVKLDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLVDSRWVVKLADFGLTEFKRDAEYT--- 164 (392)
Q Consensus 95 -------~~l~~~~~~l~~~~~~~i~~qi~~~l~ylH~~~iiiHrDlKp~NIll~~~~~~kl~DFGla~~~~~~~~~--- 164 (392)
+|++....++.....+.|..||++||.|||.+.. +||||-..|+|+..-..+|+.|||+++........
T Consensus 779 mP~G~LlDyvr~hr~~igsq~lLnw~~QIAkgM~YLe~qrl-VHrdLaaRNVLVksP~hvkitdfgla~ll~~d~~ey~~ 857 (1177)
T KOG1025|consen 779 MPLGCLLDYVREHRDNIGSQDLLNWCYQIAKGMKYLEEQRL-VHRDLAARNVLVKSPNHVKITDFGLAKLLAPDEKEYSA 857 (1177)
T ss_pred cccchHHHHHHHhhccccHHHHHHHHHHHHHHHHHHHhcch-hhhhhhhhheeecCCCeEEEEecchhhccCcccccccc
Confidence 7888777789999999999999999999999999 99999999999999999999999999987554321
Q ss_pred ----------------------cccccceeeeeee
Q psy6828 165 ----------------------GTDQHSFLQHTYH 177 (392)
Q Consensus 165 ----------------------~~d~~s~g~~~~~ 177 (392)
..||||||++.||
T Consensus 858 ~~gK~pikwmale~i~~~~~thqSDVWsfGVtiWE 892 (1177)
T KOG1025|consen 858 PGGKVPIKWMALESIRIRKYTHQSDVWSFGVTIWE 892 (1177)
T ss_pred cccccCcHHHHHHHhhccCCCchhhhhhhhhhHHH
Confidence 2399999999999
No 274
>cd06653 STKc_MEKK3_like_1 Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain, functionally uncharacterized subgroup 1. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MEKK3-like subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phospho
Probab=99.73 E-value=1.2e-17 Score=153.85 Aligned_cols=111 Identities=24% Similarity=0.335 Sum_probs=91.0
Q ss_pred eeccCCCCCcceeEEEEEEEeecCcEEEEEEcCCC-----ChhHHHHHHHHHHH--------------------------
Q psy6828 46 SLSSNPDSDFRYSAIFTPIGIYKGRIFAIKRIPKK-----SVDITRAMKKELKI-------------------------- 94 (392)
Q Consensus 46 ~~~~~~lg~G~~g~V~~~~~~~~~~~vAiK~~~~~-----~~~~~~~~~~E~~~-------------------------- 94 (392)
|...+.+|+|+||.||++.+..+++.||+|.+... .......+.+|+.+
T Consensus 4 ~~~~~~lg~g~~g~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~~~ei~~l~~l~h~~i~~~~~~~~~~~~~~~~~ 83 (264)
T cd06653 4 WRLGKLLGRGAFGEVYLCYDADTGRELAVKQVPFDPDSQETSKEVNALECEIQLLKNLRHDRIVQYYGCLRDPEEKKLSI 83 (264)
T ss_pred eeeeeeEccCCCeEEEEEEEcCCCCEEEEEEEecCcccchhhHHHHHHHHHHHHHHHcCCCCcceEEEEEEcCCCCEEEE
Confidence 34466799999999999999999999999987532 12334567777776
Q ss_pred -----------HHhhcCCcCCCHHHHHHHHHHHHHHHHHHhcCCcccccCCCCCceEEcCCceEEEeccccchhc
Q psy6828 95 -----------DIMENEDVKLDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLVDSRWVVKLADFGLTEFK 158 (392)
Q Consensus 95 -----------~~l~~~~~~l~~~~~~~i~~qi~~~l~ylH~~~iiiHrDlKp~NIll~~~~~~kl~DFGla~~~ 158 (392)
+++... ..+++..+..++.|++.||.|||++++ +|+||||+||+++.++.++|+|||+++..
T Consensus 84 v~e~~~~~~L~~~~~~~-~~l~~~~~~~~~~~i~~al~~LH~~~i-~H~dl~p~ni~i~~~~~~~l~dfg~~~~~ 156 (264)
T cd06653 84 FVEYMPGGSIKDQLKAY-GALTENVTRRYTRQILQGVSYLHSNMI-VHRDIKGANILRDSAGNVKLGDFGASKRI 156 (264)
T ss_pred EEEeCCCCcHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHhCCE-ecCCCCHHHEEEcCCCCEEECcccccccc
Confidence 222222 247889999999999999999999999 99999999999999999999999998754
No 275
>cd07858 STKc_TEY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TEY Mitogen-Activated Protein Kinases from Plants. Serine/Threonine Kinases (STKs), Plant TEY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TEY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. There are two subtypes of plant MAPKs based on the conserved phosphorylation motif present in the activati
Probab=99.73 E-value=9.2e-18 Score=160.47 Aligned_cols=132 Identities=22% Similarity=0.289 Sum_probs=102.6
Q ss_pred eeeeccCCCCCcceeEEEEEEEeecCcEEEEEEcCCCC--hhHHHHHHHHHHH---------------------------
Q psy6828 44 QVSLSSNPDSDFRYSAIFTPIGIYKGRIFAIKRIPKKS--VDITRAMKKELKI--------------------------- 94 (392)
Q Consensus 44 ~~~~~~~~lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~--~~~~~~~~~E~~~--------------------------- 94 (392)
..|...+.||+|+||.||++.+..+++.||||.+.... ......+.+|+.+
T Consensus 5 ~~y~~~~~lg~G~~~~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~ni~~~~~~~~~~~~~~~~~~ 84 (337)
T cd07858 5 TKYVPIKPIGRGAYGIVCSAKNSETNEKVAIKKIANAFDNRIDAKRTLREIKLLRHLDHENVIAIKDIMPPPHREAFNDV 84 (337)
T ss_pred cceeEEEEeccCCCeEEEEEEecCCCCeEEEEEecccccccchhHHHHHHHHHHHhcCCCCccchHHheecccccccCcE
Confidence 34666778999999999999999999999999987532 1223344555554
Q ss_pred ------------HHhhcCCcCCCHHHHHHHHHHHHHHHHHHhcCCcccccCCCCCceEEcCCceEEEeccccchhcccc-
Q psy6828 95 ------------DIMENEDVKLDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLVDSRWVVKLADFGLTEFKRDA- 161 (392)
Q Consensus 95 ------------~~l~~~~~~l~~~~~~~i~~qi~~~l~ylH~~~iiiHrDlKp~NIll~~~~~~kl~DFGla~~~~~~- 161 (392)
+++. ....+++..+..++.|++.||.|||++++ +||||||+||+++.++.+||+|||++......
T Consensus 85 ~lv~e~~~~~L~~~~~-~~~~l~~~~~~~i~~qi~~aL~~LH~~~i-~H~dlkp~Nil~~~~~~~kL~Dfg~~~~~~~~~ 162 (337)
T cd07858 85 YIVYELMDTDLHQIIR-SSQTLSDDHCQYFLYQLLRGLKYIHSANV-LHRDLKPSNLLLNANCDLKICDFGLARTTSEKG 162 (337)
T ss_pred EEEEeCCCCCHHHHHh-cCCCCCHHHHHHHHHHHHHHHHHHHhCCE-ecCCCCHHHEEEcCCCCEEECcCccccccCCCc
Confidence 1111 12368999999999999999999999999 99999999999999999999999998754321
Q ss_pred -----------------------ccccccccceeeeeee
Q psy6828 162 -----------------------EYTGTDQHSFLQHTYH 177 (392)
Q Consensus 162 -----------------------~~~~~d~~s~g~~~~~ 177 (392)
.....|+||+|+++|+
T Consensus 163 ~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~ 201 (337)
T cd07858 163 DFMTEYVVTRWYRAPELLLNCSEYTTAIDVWSVGCIFAE 201 (337)
T ss_pred ccccccccccCccChHHHhcCCCCCCcccHHHHHHHHHH
Confidence 0123488888888887
No 276
>cd05579 STKc_MAST_like Catalytic domain of Microtubule-associated serine/threonine kinase-like proteins. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MAST kinase subfamily includes MAST kinases, MAST-like (MASTL) kinases, and fungal kinases with similarity to Saccharomyces cerevisiae Rim15 and Schizosaccharomyces pombe cek1. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. MASTL kinases carry only a catalytic domain which contains a long insert re
Probab=99.73 E-value=1e-17 Score=153.57 Aligned_cols=105 Identities=32% Similarity=0.472 Sum_probs=88.0
Q ss_pred CCCcceeEEEEEEEeecCcEEEEEEcCCCCh---hHHHHHHHHHHH----------------------------------
Q psy6828 52 DSDFRYSAIFTPIGIYKGRIFAIKRIPKKSV---DITRAMKKELKI---------------------------------- 94 (392)
Q Consensus 52 lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~~---~~~~~~~~E~~~---------------------------------- 94 (392)
+|+|+||.||++.+..+|+.|++|.+..... ...+.+.+|+.+
T Consensus 1 lg~g~~~~vy~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L 80 (265)
T cd05579 1 ISKGAYGRVFLAKKKSTGDIYAIKVIKKADMIRKNQVDQVLTERDILSQAQSPYVVKLYYSFQGKKNLYLVMEYLPGGDL 80 (265)
T ss_pred CCCCCceEEEEEEECCCCCEEEEEEecchhhhhhhHHHHHHHHHHHHHhCCCcchhHHHHheecCcEEEEEEecCCCCcH
Confidence 6899999999999988999999999976544 344556666554
Q ss_pred -HHhhcCCcCCCHHHHHHHHHHHHHHHHHHhcCCcccccCCCCCceEEcCCceEEEeccccchhc
Q psy6828 95 -DIMENEDVKLDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLVDSRWVVKLADFGLTEFK 158 (392)
Q Consensus 95 -~~l~~~~~~l~~~~~~~i~~qi~~~l~ylH~~~iiiHrDlKp~NIll~~~~~~kl~DFGla~~~ 158 (392)
+++.... .+++..+..++.|++.||.|||+.++ +|+||+|+||++++++.++|+|||++...
T Consensus 81 ~~~l~~~~-~~~~~~~~~i~~qi~~~L~~lH~~~i-~H~di~~~nil~~~~~~~~l~dfg~~~~~ 143 (265)
T cd05579 81 ASLLENVG-SLDEDVARIYIAEIVLALEYLHSNGI-IHRDLKPDNILIDSNGHLKLTDFGLSKVG 143 (265)
T ss_pred HHHHHHcC-CCCHHHHHHHHHHHHHHHHHHHHcCe-ecCCCCHHHeEEcCCCCEEEEecccchhc
Confidence 2222222 68999999999999999999999999 99999999999999999999999988754
No 277
>cd07860 STKc_CDK2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase 2 and 3. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 2 (CDK2) and CDK3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK2/3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK2 is regulated by cyclin E or cyclin A. Upon activation by cyclin E, it phosphorylates the retinoblastoma (pRb) protein which activates E2F mediated transcription and allows cells to move into S phase. The CDK2/cyclin A complex
Probab=99.73 E-value=9.8e-18 Score=155.97 Aligned_cols=111 Identities=21% Similarity=0.387 Sum_probs=90.1
Q ss_pred eccCCCCCcceeEEEEEEEeecCcEEEEEEcCCCCh--hHHHHHHHHHHH--------------------------HHhh
Q psy6828 47 LSSNPDSDFRYSAIFTPIGIYKGRIFAIKRIPKKSV--DITRAMKKELKI--------------------------DIME 98 (392)
Q Consensus 47 ~~~~~lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~~--~~~~~~~~E~~~--------------------------~~l~ 98 (392)
...+.+|+|+||.||++.+..+++.||||.+..... ...+.+.+|+.+ +++.
T Consensus 3 ~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~~~ 82 (284)
T cd07860 3 QKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEFLH 82 (284)
T ss_pred eeeeeecCCCceEEEEEEECCCCCEEEEEEccccccccccchHHHHHHHHHHhcCCCCCcchhhhcccCCcEEEEeeccc
Confidence 345679999999999999999999999999865432 223456667665 2221
Q ss_pred ---------cCCcCCCHHHHHHHHHHHHHHHHHHhcCCcccccCCCCCceEEcCCceEEEeccccchhc
Q psy6828 99 ---------NEDVKLDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLVDSRWVVKLADFGLTEFK 158 (392)
Q Consensus 99 ---------~~~~~l~~~~~~~i~~qi~~~l~ylH~~~iiiHrDlKp~NIll~~~~~~kl~DFGla~~~ 158 (392)
.....+++..+..++.|++.||.|||+.++ +||||||+||+++.++.+||+|||++...
T Consensus 83 ~~l~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~i-~H~~l~p~nill~~~~~~~l~dfg~~~~~ 150 (284)
T cd07860 83 QDLKKFMDASPLSGIPLPLIKSYLFQLLQGLAFCHSHRV-LHRDLKPQNLLINTEGAIKLADFGLARAF 150 (284)
T ss_pred cCHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCe-ecCCCCHHHEEECCCCCEEEeeccchhhc
Confidence 112358899999999999999999999999 99999999999999999999999988643
No 278
>cd05056 PTKc_FAK Catalytic domain of the Protein Tyrosine Kinase, Focal Adhesion Kinase. Protein Tyrosine Kinase (PTK) family; Focal Adhesion Kinase (FAK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FAK is a cytoplasmic (or nonreceptor) tyr kinase that contains an autophosphorylation site and a FERM domain at the N-terminus, a central tyr kinase domain, proline-rich regions, and a C-terminal FAT (focal adhesion targeting) domain. FAK activity is dependent on integrin-mediated cell adhesion, which facilitates N-terminal autophosphorylation. Full activation is achieved by the phosphorylation of its two adjacent A-loop tyrosines. FAK is important in mediating signaling initiated at sites of cell adhesions
Probab=99.73 E-value=1.2e-17 Score=154.39 Aligned_cols=111 Identities=19% Similarity=0.259 Sum_probs=91.7
Q ss_pred eccCCCCCcceeEEEEEEEeec---CcEEEEEEcCCCC-hhHHHHHHHHHHH----------------------------
Q psy6828 47 LSSNPDSDFRYSAIFTPIGIYK---GRIFAIKRIPKKS-VDITRAMKKELKI---------------------------- 94 (392)
Q Consensus 47 ~~~~~lg~G~~g~V~~~~~~~~---~~~vAiK~~~~~~-~~~~~~~~~E~~~---------------------------- 94 (392)
...+.+|+|+||.||+|.+... ...||||...... ....+.+.+|+.+
T Consensus 9 ~~~~~lg~g~~g~v~~~~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~lv~e~~ 88 (270)
T cd05056 9 TLGRCIGEGQFGDVYQGVYMSPENEKIAVAVKTCKNCTSPSVREKFLQEAYIMRQFDHPHIVKLIGVITENPVWIVMELA 88 (270)
T ss_pred eeeeeeCCccceeEEEEEEecCCCCCcceEEEecCCcCCHHHHHHHHHHHHHHHhCCCCchhceeEEEcCCCcEEEEEcC
Confidence 3456799999999999987654 3479999987654 3455677888776
Q ss_pred ------HHhhcCCcCCCHHHHHHHHHHHHHHHHHHhcCCcccccCCCCCceEEcCCceEEEeccccchhc
Q psy6828 95 ------DIMENEDVKLDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLVDSRWVVKLADFGLTEFK 158 (392)
Q Consensus 95 ------~~l~~~~~~l~~~~~~~i~~qi~~~l~ylH~~~iiiHrDlKp~NIll~~~~~~kl~DFGla~~~ 158 (392)
+++......+++..+..++.|++.||.|||+.++ +||||||+||+++.++.+|++|||+++..
T Consensus 89 ~~~~L~~~l~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~~-~H~dl~p~nili~~~~~~~l~d~g~~~~~ 157 (270)
T cd05056 89 PLGELRSYLQVNKYSLDLASLILYSYQLSTALAYLESKRF-VHRDIAARNVLVSSPDCVKLGDFGLSRYL 157 (270)
T ss_pred CCCcHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhCCe-eccccChheEEEecCCCeEEccCceeeec
Confidence 4444333358999999999999999999999999 99999999999999999999999998754
No 279
>cd05057 PTKc_EGFR_like Catalytic domain of Epidermal Growth Factor Receptor-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR) subfamily; catalytic (c) domain. EGFR (HER, ErbB) subfamily members include EGFR (HER1, ErbB1), HER2 (ErbB2), HER3 (ErbB3), HER4 (ErbB4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The EGFR proteins are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instea
Probab=99.73 E-value=3.2e-17 Score=152.20 Aligned_cols=113 Identities=23% Similarity=0.375 Sum_probs=92.7
Q ss_pred eeccCCCCCcceeEEEEEEEeecCc----EEEEEEcCCCCh-hHHHHHHHHHHH--------------------------
Q psy6828 46 SLSSNPDSDFRYSAIFTPIGIYKGR----IFAIKRIPKKSV-DITRAMKKELKI-------------------------- 94 (392)
Q Consensus 46 ~~~~~~lg~G~~g~V~~~~~~~~~~----~vAiK~~~~~~~-~~~~~~~~E~~~-------------------------- 94 (392)
+...+.||+|+||.||+|.+..+|+ .||+|.+.+... .....+.+|+..
T Consensus 9 ~~~~~~ig~g~~g~v~~~~~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~v~e 88 (279)
T cd05057 9 LEKIKVLGSGAFGTVYKGVWIPEGEKVKIPVAIKVLREETSPKANKEILDEAYVMASVDHPHVVRLLGICLSSQVQLITQ 88 (279)
T ss_pred cEEcceecCCCCccEEEEEEecCCCCcceEEEEEeccCCCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEecCceEEEEe
Confidence 3445789999999999999877665 589999876643 344567777666
Q ss_pred --------HHhhcCCcCCCHHHHHHHHHHHHHHHHHHhcCCcccccCCCCCceEEcCCceEEEeccccchhcc
Q psy6828 95 --------DIMENEDVKLDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLVDSRWVVKLADFGLTEFKR 159 (392)
Q Consensus 95 --------~~l~~~~~~l~~~~~~~i~~qi~~~l~ylH~~~iiiHrDlKp~NIll~~~~~~kl~DFGla~~~~ 159 (392)
+++.+....+++..+..++.|++.||.|||+.++ +||||||+||+++.++.+||+|||+++...
T Consensus 89 ~~~~g~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~i-~H~di~p~nil~~~~~~~kL~dfg~~~~~~ 160 (279)
T cd05057 89 LMPLGCLLDYVRNHKDNIGSQYLLNWCVQIAKGMSYLEEKRL-VHRDLAARNVLVKTPQHVKITDFGLAKLLD 160 (279)
T ss_pred cCCCCcHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHhCCE-EecccCcceEEEcCCCeEEECCCccccccc
Confidence 3333334468999999999999999999999999 999999999999999999999999987543
No 280
>cd06615 PKc_MEK Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase. Protein kinases (PKs), MAP/ERK kinase (MEK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 and MEK2 are dual-specificity PKs that phosphorylate and activate the down
Probab=99.73 E-value=1.1e-17 Score=158.01 Aligned_cols=129 Identities=23% Similarity=0.291 Sum_probs=101.5
Q ss_pred eccCCCCCcceeEEEEEEEeecCcEEEEEEcCCCCh-hHHHHHHHHHHH-------------------------------
Q psy6828 47 LSSNPDSDFRYSAIFTPIGIYKGRIFAIKRIPKKSV-DITRAMKKELKI------------------------------- 94 (392)
Q Consensus 47 ~~~~~lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~~-~~~~~~~~E~~~------------------------------- 94 (392)
...+.||+|+||.||++.+..+++.||+|.+..... ...+.+.+|+++
T Consensus 4 ~~~~~lg~G~~g~v~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~ey~~~ 83 (308)
T cd06615 4 EKLGELGAGNGGVVTKVLHRPSGLIMARKLIHLEIKPAIRNQIIRELKVLHECNSPYIVGFYGAFYSDGEISICMEHMDG 83 (308)
T ss_pred eEEeeccCCCCeEEEEEEEcCCCeEEEEEEeccccCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEeeCCEEEEEeeccCC
Confidence 345679999999999999999999999999875432 334567778776
Q ss_pred ----HHhhcCCcCCCHHHHHHHHHHHHHHHHHHhc-CCcccccCCCCCceEEcCCceEEEeccccchhccccc-------
Q psy6828 95 ----DIMENEDVKLDNMFIASLVADILRGMLYLHD-SALRYHGNLKASNCLVDSRWVVKLADFGLTEFKRDAE------- 162 (392)
Q Consensus 95 ----~~l~~~~~~l~~~~~~~i~~qi~~~l~ylH~-~~iiiHrDlKp~NIll~~~~~~kl~DFGla~~~~~~~------- 162 (392)
+++... ..+++..+..++.|++.||.|||+ .++ +||||||+|||++.++.+||+|||++.......
T Consensus 84 ~~L~~~l~~~-~~~~~~~~~~~~~~i~~~l~~lH~~~~i-~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~ 161 (308)
T cd06615 84 GSLDQVLKKA-GRIPENILGKISIAVLRGLTYLREKHKI-MHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANSFVGT 161 (308)
T ss_pred CcHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHhhCCE-EECCCChHHEEEecCCcEEEccCCCcccccccccccCCCC
Confidence 333322 358999999999999999999997 578 999999999999999999999999887542210
Q ss_pred --------------cccccccceeeeeee
Q psy6828 163 --------------YTGTDQHSFLQHTYH 177 (392)
Q Consensus 163 --------------~~~~d~~s~g~~~~~ 177 (392)
....|+||+|+++|+
T Consensus 162 ~~~~aPE~~~~~~~~~~~DiwslG~~l~~ 190 (308)
T cd06615 162 RSYMSPERLQGTHYTVQSDIWSLGLSLVE 190 (308)
T ss_pred cCccChhHhcCCCCCccchHHHHHHHHHH
Confidence 112478888888777
No 281
>PTZ00266 NIMA-related protein kinase; Provisional
Probab=99.73 E-value=8.1e-18 Score=175.87 Aligned_cols=134 Identities=16% Similarity=0.219 Sum_probs=103.1
Q ss_pred ceeeeccCCCCCcceeEEEEEEEeecCcEEEEEEcCCCCh--hHHHHHHHHHHH--------------------------
Q psy6828 43 SQVSLSSNPDSDFRYSAIFTPIGIYKGRIFAIKRIPKKSV--DITRAMKKELKI-------------------------- 94 (392)
Q Consensus 43 ~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~~--~~~~~~~~E~~~-------------------------- 94 (392)
...|...+.||+|+||.||++.+..+++.||+|.+..... .....+.+|+.+
T Consensus 12 l~~YeIl~kLG~GgFGtVYLAkdk~tg~~vAlKvIk~~~l~e~~~~~~~~EI~IL~~L~HPNIVrl~d~f~de~~~~lyI 91 (1021)
T PTZ00266 12 LNEYEVIKKIGNGRFGEVFLVKHKRTQEFFCWKAISYRGLKEREKSQLVIEVNVMRELKHKNIVRYIDRFLNKANQKLYI 91 (1021)
T ss_pred cCCEEEEEEEecCCCeEEEEEEECCCCeEEEEEEEeccccCHHHHHHHHHHHHHHHHcCCCCcCeEEEEEEecCCCEEEE
Confidence 3456677889999999999999999999999999875433 344567778777
Q ss_pred -----------HHhhc---CCcCCCHHHHHHHHHHHHHHHHHHhcCC-------cccccCCCCCceEEcCC---------
Q psy6828 95 -----------DIMEN---EDVKLDNMFIASLVADILRGMLYLHDSA-------LRYHGNLKASNCLVDSR--------- 144 (392)
Q Consensus 95 -----------~~l~~---~~~~l~~~~~~~i~~qi~~~l~ylH~~~-------iiiHrDlKp~NIll~~~--------- 144 (392)
+++.. ....+++..++.|+.||+.||.|||+.+ | +||||||+|||++..
T Consensus 92 VMEY~~gGSL~~lL~k~~~~~g~L~E~~Il~Ia~QIL~ALaYLHs~g~~~~~k~I-VHRDLKPeNILL~s~~~~lg~i~~ 170 (1021)
T PTZ00266 92 LMEFCDAGDLSRNIQKCYKMFGKIEEHAIVDITRQLLHALAYCHNLKDGPNGERV-LHRDLKPQNIFLSTGIRHIGKITA 170 (1021)
T ss_pred EEeCCCCCcHHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHhcccccccCCc-eeccCcHHHeEeecCccccccccc
Confidence 12211 1235899999999999999999999844 7 999999999999642
Q ss_pred --------ceEEEeccccchhccccc------------------------cccccccceeeeeee
Q psy6828 145 --------WVVKLADFGLTEFKRDAE------------------------YTGTDQHSFLQHTYH 177 (392)
Q Consensus 145 --------~~~kl~DFGla~~~~~~~------------------------~~~~d~~s~g~~~~~ 177 (392)
+.+||+|||++....... ....|+||||+++|+
T Consensus 171 ~~~n~ng~~iVKLsDFGlAr~l~~~s~~~s~vGTp~YmAPEvL~ge~~~~s~KSDVWSLG~ILYE 235 (1021)
T PTZ00266 171 QANNLNGRPIAKIGDFGLSKNIGIESMAHSCVGTPYYWSPELLLHETKSYDDKSDMWALGCIIYE 235 (1021)
T ss_pred cccccCCCCceEEccCCccccccccccccccCCCccccCHHHHhccCCCCCchhHHHHHHHHHHH
Confidence 348999999987542110 113499999999998
No 282
>cd07865 STKc_CDK9 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 9. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK9 together with a cyclin partner (cyclin T1, T2a, T2b, or K) is the main component of distinct positive transcription elongation factors (P-TEFb), which function as Ser2 C-terminal domain kinases of RNA polymerase II. P-TEFb participates in multipl
Probab=99.73 E-value=7.3e-18 Score=158.69 Aligned_cols=112 Identities=24% Similarity=0.383 Sum_probs=89.8
Q ss_pred eeccCCCCCcceeEEEEEEEeecCcEEEEEEcCCCCh--hHHHHHHHHHHH-----------------------------
Q psy6828 46 SLSSNPDSDFRYSAIFTPIGIYKGRIFAIKRIPKKSV--DITRAMKKELKI----------------------------- 94 (392)
Q Consensus 46 ~~~~~~lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~~--~~~~~~~~E~~~----------------------------- 94 (392)
|.....||+|+||.||++.+..+++.||||.+..... .....+.+|+.+
T Consensus 14 y~~~~~lg~g~~~~v~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~~ 93 (310)
T cd07865 14 YEKLAKIGQGTFGEVFKARHKKTKQIVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEICRTKATPYNRYKGS 93 (310)
T ss_pred eEEEEEeecCCCEEEEEEEECCCCcEEEEEEEeccCCcCCchhHHHHHHHHHHhCCCCCccceEEEEecccccccCCCce
Confidence 4556779999999999999999999999998864321 112233445544
Q ss_pred -------------HHhhcCCcCCCHHHHHHHHHHHHHHHHHHhcCCcccccCCCCCceEEcCCceEEEeccccchhc
Q psy6828 95 -------------DIMENEDVKLDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLVDSRWVVKLADFGLTEFK 158 (392)
Q Consensus 95 -------------~~l~~~~~~l~~~~~~~i~~qi~~~l~ylH~~~iiiHrDlKp~NIll~~~~~~kl~DFGla~~~ 158 (392)
+++.+....+++.++..++.|++.||.|||++++ +|+||||+||+++.++.+||+|||++...
T Consensus 94 ~~lv~e~~~~~l~~~l~~~~~~~~~~~~~~i~~qi~~al~~lH~~~i-~H~dl~p~nil~~~~~~~kl~dfg~~~~~ 169 (310)
T cd07865 94 FYLVFEFCEHDLAGLLSNKNVKFTLSEIKKVMKMLLNGLYYIHRNKI-LHRDMKAANILITKDGILKLADFGLARAF 169 (310)
T ss_pred EEEEEcCCCcCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHCCe-eccCCCHHHEEECCCCcEEECcCCCcccc
Confidence 1222223358999999999999999999999999 99999999999999999999999998754
No 283
>cd05122 PKc_STE Catalytic domain of STE family Protein Kinases. Protein Kinases (PKs), STE family, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The STE family is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases (STKs), protein tyrosine kinases (PTKs), RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This family is composed of STKs, and some dual-specificity PKs that phosphorylate both threonine and tyrosine residues of target proteins. Most members are kinases involved in mitogen-activated protein kinase (MAPK) signaling cascades, acting as MAPK kinases (MAPKKs), MAPK kinase kinases (MAPKKKs), or MAPK kinase kinase kinases (MAP4Ks). The MAPK signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core
Probab=99.73 E-value=1.4e-17 Score=151.31 Aligned_cols=113 Identities=27% Similarity=0.416 Sum_probs=95.6
Q ss_pred ccCCCCCcceeEEEEEEEeecCcEEEEEEcCCCChhHHHHHHHHHHH---------------------------------
Q psy6828 48 SSNPDSDFRYSAIFTPIGIYKGRIFAIKRIPKKSVDITRAMKKELKI--------------------------------- 94 (392)
Q Consensus 48 ~~~~lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~~~~~~~~~~E~~~--------------------------------- 94 (392)
..+.+|+|++|.||++.+..+++.+++|.++.......+.+.+|+..
T Consensus 4 ~~~~l~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~l~~e~~~~~~ 83 (253)
T cd05122 4 ILEKIGKGGFGEVYKARHKRTGKEVAIKVIKLESKEKKEKIINEIQILKKCKHPNIVKYYGSYLKKDELWIVMEFCSGGS 83 (253)
T ss_pred eeeeeccCCceEEEEEEECCCCcEEEEEEecccchhHHHHHHHHHHHHHhCCCCCEeEEEEEEecCCeEEEEEecCCCCc
Confidence 45679999999999999988999999999987655455677777765
Q ss_pred --HHhhcCCcCCCHHHHHHHHHHHHHHHHHHhcCCcccccCCCCCceEEcCCceEEEeccccchhcccc
Q psy6828 95 --DIMENEDVKLDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLVDSRWVVKLADFGLTEFKRDA 161 (392)
Q Consensus 95 --~~l~~~~~~l~~~~~~~i~~qi~~~l~ylH~~~iiiHrDlKp~NIll~~~~~~kl~DFGla~~~~~~ 161 (392)
+++......+++..+..++.|++.||.|||++++ +|+||+|+||++++++.++|+|||.+......
T Consensus 84 L~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~i-~h~dl~p~ni~i~~~~~~~l~d~~~~~~~~~~ 151 (253)
T cd05122 84 LKDLLKSTNQTLTESQIAYVCKELLKGLEYLHSNGI-IHRDIKAANILLTSDGEVKLIDFGLSAQLSDT 151 (253)
T ss_pred HHHHHhhcCCCCCHHHHHHHHHHHHHHHHHhhcCCE-ecCCCCHHHEEEccCCeEEEeecccccccccc
Confidence 3333332468999999999999999999999999 99999999999999999999999998776543
No 284
>cd05053 PTKc_FGFR Catalytic domain of the Protein Tyrosine Kinases, Fibroblast Growth Factor Receptors. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor (FGFR) subfamily; catalytic (c) domain. The FGFR subfamily consists of FGFR1, FGFR2, FGFR3, FGFR4, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K).PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, and to heparin/heparan sulfate (HS) results in the formation of a ternary complex, which leads to receptor dimerization and activation,
Probab=99.73 E-value=6.8e-17 Score=151.06 Aligned_cols=112 Identities=21% Similarity=0.313 Sum_probs=88.7
Q ss_pred eeccCCCCCcceeEEEEEEEeecC-----cEEEEEEcCCCCh-hHHHHHHHHHHH-------------------------
Q psy6828 46 SLSSNPDSDFRYSAIFTPIGIYKG-----RIFAIKRIPKKSV-DITRAMKKELKI------------------------- 94 (392)
Q Consensus 46 ~~~~~~lg~G~~g~V~~~~~~~~~-----~~vAiK~~~~~~~-~~~~~~~~E~~~------------------------- 94 (392)
+.....+|+|+||.||++...... ..+|+|.+..... .....+.+|+.+
T Consensus 14 ~~~~~~ig~g~~g~v~~~~~~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~~h~~i~~~~~~~~~~~~~~l 93 (293)
T cd05053 14 LTLGKPLGEGAFGQVVKAEAVGLDNPNETSTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGVCTQEGPLYV 93 (293)
T ss_pred eEEeeEecccccccEEEEEEecCCCCCCceeEEEEEccCCCCHHHHHHHHHHHHHHHhhcCCCCeeeEEEEEcCCCCeEE
Confidence 444567999999999999876433 7899999975432 333456667654
Q ss_pred -----------HHhh---------------cCCcCCCHHHHHHHHHHHHHHHHHHhcCCcccccCCCCCceEEcCCceEE
Q psy6828 95 -----------DIME---------------NEDVKLDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLVDSRWVVK 148 (392)
Q Consensus 95 -----------~~l~---------------~~~~~l~~~~~~~i~~qi~~~l~ylH~~~iiiHrDlKp~NIll~~~~~~k 148 (392)
++++ .....+++..+..++.|++.||.|||++++ +||||||+||+++.++.+|
T Consensus 94 i~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~LH~~~i-vH~dlkp~Nil~~~~~~~k 172 (293)
T cd05053 94 VVEYAAHGNLRDFLRARRPPGEYASPDDPRPPEETLTQKDLVSFAYQVARGMEFLASKKC-IHRDLAARNVLVTEDHVMK 172 (293)
T ss_pred EEEeCCCCcHHHHHHhcCCCccccccccccccccccCHHHHHHHHHHHHHHHHHHHHCCc-cccccceeeEEEcCCCeEE
Confidence 2221 112358889999999999999999999999 9999999999999999999
Q ss_pred Eeccccchhc
Q psy6828 149 LADFGLTEFK 158 (392)
Q Consensus 149 l~DFGla~~~ 158 (392)
|+|||+++..
T Consensus 173 L~Dfg~~~~~ 182 (293)
T cd05053 173 IADFGLARDI 182 (293)
T ss_pred eCcccccccc
Confidence 9999998753
No 285
>cd06630 STKc_MEKK1 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 1. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 1 (MEKK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK1 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK1 activates the extracellular signal-regulated kinase 1/2 (ERK1/2) and c-Jun N-terminal kinase (JNK) pathways by activating their
Probab=99.73 E-value=1.3e-17 Score=153.58 Aligned_cols=111 Identities=22% Similarity=0.439 Sum_probs=90.9
Q ss_pred ccCCCCCcceeEEEEEEEeecCcEEEEEEcCCCCh------hHHHHHHHHHHH---------------------------
Q psy6828 48 SSNPDSDFRYSAIFTPIGIYKGRIFAIKRIPKKSV------DITRAMKKELKI--------------------------- 94 (392)
Q Consensus 48 ~~~~lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~~------~~~~~~~~E~~~--------------------------- 94 (392)
..+.+|+|+||.||.+.+..+++.||+|.+..... ...+.+.+|+..
T Consensus 4 ~~~~lg~g~~~~v~~~~~~~~~~~~alk~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~v~e 83 (268)
T cd06630 4 KGQQLGTGAFSSCYQARDVKTGTLMAVKQVTYVRNTSSEQEEVVEALRKEIRLMARLNHPHIIRMLGATCEDSHFNLFVE 83 (268)
T ss_pred ccceecCcCceEEEEEEEcCCCcEEEEEEeecccCCchhHHHHHHHHHHHHHHHHHcCCCceehhhceeccCCeEEEEEe
Confidence 45679999999999999999999999999975431 234567777766
Q ss_pred --------HHhhcCCcCCCHHHHHHHHHHHHHHHHHHhcCCcccccCCCCCceEEcCCc-eEEEeccccchhccc
Q psy6828 95 --------DIMENEDVKLDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLVDSRW-VVKLADFGLTEFKRD 160 (392)
Q Consensus 95 --------~~l~~~~~~l~~~~~~~i~~qi~~~l~ylH~~~iiiHrDlKp~NIll~~~~-~~kl~DFGla~~~~~ 160 (392)
+++.+. ..+++..+..++.|++.||.|||++++ +||||||+||+++.++ .+||+|||++.....
T Consensus 84 ~~~~~~L~~~l~~~-~~~~~~~~~~~~~ql~~al~~LH~~~i-~H~~i~~~nil~~~~~~~~~l~dfg~~~~~~~ 156 (268)
T cd06630 84 WMAGGSVSHLLSKY-GAFKEAVIINYTEQLLRGLSYLHENQI-IHRDVKGANLLIDSTGQRLRIADFGAAARLAA 156 (268)
T ss_pred ccCCCcHHHHHHHh-CCCCHHHHHHHHHHHHHHHHHHHhCCe-ecCCCCHHHEEEcCCCCEEEEccccccccccc
Confidence 233222 268899999999999999999999999 9999999999998775 699999999876543
No 286
>cd05105 PTKc_PDGFR_alpha Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor alpha. Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) alpha; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR alpha is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR alpha forms homodimers or heterodimers with PDGFR beta, depending on the nature of the PDGF ligand. PDGF-AA, PDGF-
Probab=99.73 E-value=1.7e-17 Score=162.05 Aligned_cols=55 Identities=31% Similarity=0.453 Sum_probs=51.3
Q ss_pred CCCHHHHHHHHHHHHHHHHHHhcCCcccccCCCCCceEEcCCceEEEeccccchhc
Q psy6828 103 KLDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLVDSRWVVKLADFGLTEFK 158 (392)
Q Consensus 103 ~l~~~~~~~i~~qi~~~l~ylH~~~iiiHrDlKp~NIll~~~~~~kl~DFGla~~~ 158 (392)
.+++.++..++.|++.||.|||++++ +||||||+|||++.++.+||+|||+++..
T Consensus 233 ~l~~~~~~~~~~qi~~aL~~LH~~~i-vH~dikp~Nill~~~~~~kL~DfGla~~~ 287 (400)
T cd05105 233 GLTTLDLLSFTYQVARGMEFLASKNC-VHRDLAARNVLLAQGKIVKICDFGLARDI 287 (400)
T ss_pred CCCHHHHHHHHHHHHHHHHHHHhCCe-eCCCCChHhEEEeCCCEEEEEeCCcceec
Confidence 37788889999999999999999999 99999999999999999999999998754
No 287
>KOG2052|consensus
Probab=99.73 E-value=3.9e-18 Score=159.16 Aligned_cols=108 Identities=21% Similarity=0.289 Sum_probs=87.4
Q ss_pred eccCCCCCcceeEEEEEEEeecCcEEEEEEcCCCChhHHHHHHHHHHH--------------------------------
Q psy6828 47 LSSNPDSDFRYSAIFTPIGIYKGRIFAIKRIPKKSVDITRAMKKELKI-------------------------------- 94 (392)
Q Consensus 47 ~~~~~lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~~~~~~~~~~E~~~-------------------------------- 94 (392)
...+.+|+|.||+||+|. +.|+.||||++.... ...+.+|.+|
T Consensus 214 ~L~e~IGkGRyGEVwrG~--wrGe~VAVKiF~srd---E~SWfrEtEIYqTvmLRHENILgFIaaD~~~~gs~TQLwLvT 288 (513)
T KOG2052|consen 214 VLQEIIGKGRFGEVWRGR--WRGEDVAVKIFSSRD---ERSWFRETEIYQTVMLRHENILGFIAADNKDNGSWTQLWLVT 288 (513)
T ss_pred EEEEEecCccccceeecc--ccCCceEEEEecccc---hhhhhhHHHHHHHHHhccchhhhhhhccccCCCceEEEEEee
Confidence 447789999999999996 559999999997553 2345555555
Q ss_pred ---------HHhhcCCcCCCHHHHHHHHHHHHHHHHHHhc-----CC--cccccCCCCCceEEcCCceEEEeccccchhc
Q psy6828 95 ---------DIMENEDVKLDNMFIASLVADILRGMLYLHD-----SA--LRYHGNLKASNCLVDSRWVVKLADFGLTEFK 158 (392)
Q Consensus 95 ---------~~l~~~~~~l~~~~~~~i~~qi~~~l~ylH~-----~~--iiiHrDlKp~NIll~~~~~~kl~DFGla~~~ 158 (392)
|||.+. .++.+...+++..+++||.|||- +| -|.|||||+.|||+.+++.+.|+|+|||-..
T Consensus 289 dYHe~GSL~DyL~r~--tv~~~~ml~LalS~AsGLaHLH~eI~GTqgKPaIAHRDlKSKNILVKkn~~C~IADLGLAv~h 366 (513)
T KOG2052|consen 289 DYHEHGSLYDYLNRN--TVTTEGMLKLALSIASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRH 366 (513)
T ss_pred ecccCCcHHHHHhhc--cCCHHHHHHHHHHHhhhHHHHHHHHhcCCCCchhhccccccccEEEccCCcEEEeeceeeEEe
Confidence 555553 58999999999999999999994 22 2599999999999999999999999999765
Q ss_pred ccc
Q psy6828 159 RDA 161 (392)
Q Consensus 159 ~~~ 161 (392)
.+.
T Consensus 367 ~~~ 369 (513)
T KOG2052|consen 367 DSD 369 (513)
T ss_pred ccc
Confidence 443
No 288
>cd06623 PKc_MAPKK_plant_like Catalytic domain of Plant dual-specificity MAP kinase kinases and similar proteins. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, Plant MAPKKs and similar proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of
Probab=99.73 E-value=6.6e-18 Score=155.03 Aligned_cols=127 Identities=24% Similarity=0.376 Sum_probs=104.8
Q ss_pred cCCCCCcceeEEEEEEEeecCcEEEEEEcCCCCh-hHHHHHHHHHHH---------------------------------
Q psy6828 49 SNPDSDFRYSAIFTPIGIYKGRIFAIKRIPKKSV-DITRAMKKELKI--------------------------------- 94 (392)
Q Consensus 49 ~~~lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~~-~~~~~~~~E~~~--------------------------------- 94 (392)
.+.+|+|++|.||++.+..+++.|++|.+..... ...+.+.+|+..
T Consensus 6 ~~~i~~g~~~~v~~~~~~~~~~~~~vk~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~~~~~~ 85 (264)
T cd06623 6 VKVLGQGSSGVVYKVRHKPTGKIYALKKIHVDGDEEFRKQLLRELKTLRSCESPYVVKCYGAFYKEGEISIVLEYMDGGS 85 (264)
T ss_pred eeeeeecCCeEEEEEEEcCCCcEEEEEEeccCcchHHHHHHHHHHHHHHhcCCCCeeeEEEEEccCCeEEEEEEecCCCc
Confidence 4679999999999999999999999999977654 445667777765
Q ss_pred --HHhhcCCcCCCHHHHHHHHHHHHHHHHHHhc-CCcccccCCCCCceEEcCCceEEEeccccchhcccccc--------
Q psy6828 95 --DIMENEDVKLDNMFIASLVADILRGMLYLHD-SALRYHGNLKASNCLVDSRWVVKLADFGLTEFKRDAEY-------- 163 (392)
Q Consensus 95 --~~l~~~~~~l~~~~~~~i~~qi~~~l~ylH~-~~iiiHrDlKp~NIll~~~~~~kl~DFGla~~~~~~~~-------- 163 (392)
+++... ..+++..+..++.|++.|+.|||+ .++ +||||+|+||+++.++.++|+|||++........
T Consensus 86 L~~~l~~~-~~l~~~~~~~~~~~l~~~l~~lh~~~~~-~H~~l~~~ni~~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~ 163 (264)
T cd06623 86 LADLLKKV-GKIPEPVLAYIARQILKGLDYLHTKRHI-IHRDIKPSNLLINSKGEVKIADFGISKVLENTLDQCNTFVGT 163 (264)
T ss_pred HHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHhccCCC-ccCCCCHHHEEECCCCCEEEccCccceecccCCCcccceeec
Confidence 333332 368999999999999999999999 999 9999999999999999999999998876432211
Q ss_pred ---------------ccccccceeeeeee
Q psy6828 164 ---------------TGTDQHSFLQHTYH 177 (392)
Q Consensus 164 ---------------~~~d~~s~g~~~~~ 177 (392)
...|+|+||+++|+
T Consensus 164 ~~y~~pE~~~~~~~~~~~Dv~slG~il~~ 192 (264)
T cd06623 164 VTYMSPERIQGESYSYAADIWSLGLTLLE 192 (264)
T ss_pred ccccCHhhhCCCCCCchhhHHHHHHHHHH
Confidence 13489999999888
No 289
>cd06626 STKc_MEKK4 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 4. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 4 (MEKK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK4 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK4 activates the c-Jun N-terminal kinase (JNK) and p38 MAPK signaling pathways by directly activating their respective MAPKKs, MKK4
Probab=99.72 E-value=1.3e-17 Score=153.09 Aligned_cols=112 Identities=25% Similarity=0.464 Sum_probs=93.9
Q ss_pred eeccCCCCCcceeEEEEEEEeecCcEEEEEEcCCCChh--HHHHHHHHHHH-----------------------------
Q psy6828 46 SLSSNPDSDFRYSAIFTPIGIYKGRIFAIKRIPKKSVD--ITRAMKKELKI----------------------------- 94 (392)
Q Consensus 46 ~~~~~~lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~~~--~~~~~~~E~~~----------------------------- 94 (392)
|...+.||+|+||.||.+.+..+++.|++|.++..... ..+.+.+|+.+
T Consensus 2 y~~~~~lg~G~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~lv~e~~ 81 (264)
T cd06626 2 WQRGNKIGGGTFGKVYTAVNLDTGELMAVKEIRIQDNDPKTIKEIADEMKVLELLKHPNLVKYYGVEVHREKVYIFMEYC 81 (264)
T ss_pred ceeeeEeecCCCcEEEEEEECCCCcEEEEEEEECcccchHHHHHHHHHHHHHHhCCCCChhheeeeEecCCEEEEEEecC
Confidence 34457899999999999999889999999999765442 56677777776
Q ss_pred ------HHhhcCCcCCCHHHHHHHHHHHHHHHHHHhcCCcccccCCCCCceEEcCCceEEEeccccchhcc
Q psy6828 95 ------DIMENEDVKLDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLVDSRWVVKLADFGLTEFKR 159 (392)
Q Consensus 95 ------~~l~~~~~~l~~~~~~~i~~qi~~~l~ylH~~~iiiHrDlKp~NIll~~~~~~kl~DFGla~~~~ 159 (392)
+++... ..+++..+..++.|++.||.|||+.++ +|+||||+||++++++.+||+|||++....
T Consensus 82 ~~~~L~~~~~~~-~~~~~~~~~~i~~~i~~~l~~lh~~~i-~H~dl~~~nil~~~~~~~kl~d~g~~~~~~ 150 (264)
T cd06626 82 SGGTLEELLEHG-RILDEHVIRVYTLQLLEGLAYLHSHGI-VHRDIKPANIFLDHNGVIKLGDFGCAVKLK 150 (264)
T ss_pred CCCcHHHHHhhc-CCCChHHHHHHHHHHHHHHHHHHHCCc-ccCCCCHHHEEECCCCCEEEcccccccccC
Confidence 333322 248899999999999999999999999 999999999999999999999999887643
No 290
>cd07854 STKc_MAPK4_6 Catalytic domain of the Serine/Threonine Kinases, Mitogen-Activated Protein Kinases 4 and 6. Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 4 (MAPK4) and MAPK6 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK4/6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. MAPK4 is also called ERK4 or p63MAPK, while MAPK6 is also called ERK3 or p97MAPK. MAPK4 and MAPK6 are atypical MAPKs that are not regulated by MAP2Ks. MAPK6 is expressed ubiquitously with highest amounts in brain and skeletal muscle. It may be involved in the control of cell differentiation by negatively regulating cell cycle progressi
Probab=99.72 E-value=1.2e-17 Score=159.99 Aligned_cols=115 Identities=23% Similarity=0.411 Sum_probs=92.8
Q ss_pred ceeeeccCCCCCcceeEEEEEEEeecCcEEEEEEcCCCChhHHHHHHHHHHH-------------HH-------------
Q psy6828 43 SQVSLSSNPDSDFRYSAIFTPIGIYKGRIFAIKRIPKKSVDITRAMKKELKI-------------DI------------- 96 (392)
Q Consensus 43 ~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~~~~~~~~~~E~~~-------------~~------------- 96 (392)
..+|...+.||.|+||.||+|.+..+++.||+|.+........+.+.+|+.+ +.
T Consensus 4 ~~~y~~~~~Lg~g~~g~vy~~~~~~~~~~v~iK~i~~~~~~~~~~~~~Ei~~l~~l~h~~i~~~~~~~~~~~~~~~~~~~ 83 (342)
T cd07854 4 GSRYMDLRPLGCGSNGLVFSAVDSDCDKRVAVKKIVLTDPQSVKHALREIKIIRRLDHDNIVKVYEVLGPSGSDLTEDVG 83 (342)
T ss_pred CcceEEEEEecCCCCEEEEEEEECCCCcEEEEEEEecCCCchHHHHHHHHHHHHhcCCCcchhhHhhhcccccccccccc
Confidence 4567778889999999999999999999999999976655555556666655 10
Q ss_pred --------------hhc------CCcCCCHHHHHHHHHHHHHHHHHHhcCCcccccCCCCCceEEcC-CceEEEeccccc
Q psy6828 97 --------------MEN------EDVKLDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLVDS-RWVVKLADFGLT 155 (392)
Q Consensus 97 --------------l~~------~~~~l~~~~~~~i~~qi~~~l~ylH~~~iiiHrDlKp~NIll~~-~~~~kl~DFGla 155 (392)
+.. ....+++..+..++.|+++||.|||+.++ +||||||+||+++. ++.+|++|||++
T Consensus 84 ~~~~~~~~~lv~e~~~~~L~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~gi-vH~dikp~Nili~~~~~~~kl~dfg~~ 162 (342)
T cd07854 84 SLTELNSVYIVQEYMETDLANVLEQGPLSEEHARLFMYQLLRGLKYIHSANV-LHRDLKPANVFINTEDLVLKIGDFGLA 162 (342)
T ss_pred cccccceEEEEeecccccHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHhCCc-ccCCCCHHHEEEcCCCceEEECCcccc
Confidence 000 01258899999999999999999999999 99999999999974 567899999998
Q ss_pred hhc
Q psy6828 156 EFK 158 (392)
Q Consensus 156 ~~~ 158 (392)
+..
T Consensus 163 ~~~ 165 (342)
T cd07854 163 RIV 165 (342)
T ss_pred eec
Confidence 643
No 291
>cd07857 STKc_MPK1 Catalytic domain of the Serine/Threonine Kinase, Fungal Mitogen-Activated Protein Kinase MPK1. Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) MPK1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MPK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs MPK1 from Saccharomyces cerevisiae, Pmk1 from Schizosaccharomyces pombe, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. MPK1 (also called Slt2) and Pmk1 (also called Spm1) are stress-activated MAPKs that regulate the cell wall integrity (CWI) pathway, and are therefore important in the maintainance of cell shape, cell wall co
Probab=99.72 E-value=1e-17 Score=159.87 Aligned_cols=109 Identities=25% Similarity=0.363 Sum_probs=87.1
Q ss_pred ccCCCCCcceeEEEEEEEeec--CcEEEEEEcCCCC--hhHHHHHHHHHHH-----------------------------
Q psy6828 48 SSNPDSDFRYSAIFTPIGIYK--GRIFAIKRIPKKS--VDITRAMKKELKI----------------------------- 94 (392)
Q Consensus 48 ~~~~lg~G~~g~V~~~~~~~~--~~~vAiK~~~~~~--~~~~~~~~~E~~~----------------------------- 94 (392)
..+.||+|+||.||++.+..+ ++.||+|.+.... ....+.+.+|+.+
T Consensus 4 ~~~~lg~G~~g~vy~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~~~~~~ 83 (332)
T cd07857 4 LIKELGQGAYGIVCSARNAETSEEETVAIKKITNVFSKKILAKRALRELKLLRHFRGHKNITCLYDMDIVFPGNFNELYL 83 (332)
T ss_pred EEEEccccCCeEEEEEEeCCCCcCceEEEEEeccccccchhHHHHHHHHHHHHHhcCCCChheeeeeeeeccccCCcEEE
Confidence 345699999999999999887 8999999986431 1123344555544
Q ss_pred ----------HHhhcCCcCCCHHHHHHHHHHHHHHHHHHhcCCcccccCCCCCceEEcCCceEEEeccccchhc
Q psy6828 95 ----------DIMENEDVKLDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLVDSRWVVKLADFGLTEFK 158 (392)
Q Consensus 95 ----------~~l~~~~~~l~~~~~~~i~~qi~~~l~ylH~~~iiiHrDlKp~NIll~~~~~~kl~DFGla~~~ 158 (392)
+++. ....+++..+..++.|++.||.|||++++ +||||||+||+++.++.+||+|||+++..
T Consensus 84 ~~e~~~~~L~~~l~-~~~~~~~~~~~~~~~qi~~aL~~LH~~gi-vH~dlkp~Nili~~~~~~kl~Dfg~a~~~ 155 (332)
T cd07857 84 YEELMEADLHQIIR-SGQPLTDAHFQSFIYQILCGLKYIHSANV-LHRDLKPGNLLVNADCELKICDFGLARGF 155 (332)
T ss_pred EEecccCCHHHHHh-cCCCCCHHHHHHHHHHHHHHHHHHHhCCc-ccCCCCHHHeEEcCCCCEEeCcCCCceec
Confidence 1111 12358899999999999999999999999 99999999999999999999999998754
No 292
>cd06622 PKc_MAPKK_PBS2_like Catalytic domain of fungal PBS2-like dual-specificity MAP kinase kinases. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal PBS2-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include
Probab=99.72 E-value=1.7e-17 Score=154.56 Aligned_cols=110 Identities=19% Similarity=0.312 Sum_probs=89.4
Q ss_pred ccCCCCCcceeEEEEEEEeecCcEEEEEEcCCCC-hhHHHHHHHHHHH--------------------------------
Q psy6828 48 SSNPDSDFRYSAIFTPIGIYKGRIFAIKRIPKKS-VDITRAMKKELKI-------------------------------- 94 (392)
Q Consensus 48 ~~~~lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~-~~~~~~~~~E~~~-------------------------------- 94 (392)
..+.||+|+||.||++.+..+++.||+|.+.... ....+.+.+|+.+
T Consensus 5 ~~~~ig~g~~g~v~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~e~~~~~ 84 (286)
T cd06622 5 VLDELGKGNYGSVYKVLHRPTGVTMAMKEIRLELDESKFNQIIMELDILHKAVSPYIVDFYGAFFIEGAVYMCMEYMDAG 84 (286)
T ss_pred hhhhhcccCCeEEEEEEEcCCCcEEEEEEeecccCHHHHHHHHHHHHHHHhcCCCcHHhhhhheecCCeEEEEEeecCCC
Confidence 3567999999999999999899999999886542 2333556667655
Q ss_pred ---HHhhcC--CcCCCHHHHHHHHHHHHHHHHHHhc-CCcccccCCCCCceEEcCCceEEEeccccchhc
Q psy6828 95 ---DIMENE--DVKLDNMFIASLVADILRGMLYLHD-SALRYHGNLKASNCLVDSRWVVKLADFGLTEFK 158 (392)
Q Consensus 95 ---~~l~~~--~~~l~~~~~~~i~~qi~~~l~ylH~-~~iiiHrDlKp~NIll~~~~~~kl~DFGla~~~ 158 (392)
.++... ...+++..+..++.|++.||.|||+ .++ +||||||+||+++.++.+||+|||++...
T Consensus 85 ~l~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~~i-~H~dl~p~nil~~~~~~~~l~dfg~~~~~ 153 (286)
T cd06622 85 SLDKLYAGGVATEGIPEDVLRRITYAVVKGLKFLKEEHNI-IHRDVKPTNVLVNGNGQVKLCDFGVSGNL 153 (286)
T ss_pred CHHHHHHhccccCCCCHHHHHHHHHHHHHHHHHHHhcCCE-eeCCCCHHHEEECCCCCEEEeecCCcccc
Confidence 233322 1268999999999999999999996 588 99999999999999999999999988653
No 293
>cd07831 STKc_MOK Catalytic domain of the Serine/Threonine Kinase, MAPK/MAK/MRK Overlapping Kinase. Serine/Threonine Kinases (STKs), MAPK/MAK/MRK Overlapping Kinase (MOK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MOK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MOK, also called Renal tumor antigen 1 (RAGE-1), is widely expressed and is enriched in testis, kidney, lung, and brain. It is expressed in approximately 50% of renal cell carcinomas (RCC) and is a potential target for immunotherapy. MOK is stabilized by its association with the HSP90 molecular chaperone. It is induced by the transcription factor Cdx2 and may be involved in regulating intestinal epithelial development and differentiation.
Probab=99.72 E-value=1e-17 Score=155.57 Aligned_cols=109 Identities=19% Similarity=0.306 Sum_probs=86.7
Q ss_pred ccCCCCCcceeEEEEEEEeecCcEEEEEEcCCCChh-HHHHHHHHHHH--------------------------------
Q psy6828 48 SSNPDSDFRYSAIFTPIGIYKGRIFAIKRIPKKSVD-ITRAMKKELKI-------------------------------- 94 (392)
Q Consensus 48 ~~~~lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~~~-~~~~~~~E~~~-------------------------------- 94 (392)
..+.+|+|+||.||++.+..+++.||+|.+++.... ......+|+..
T Consensus 3 ~~~~lg~g~~~~v~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~~~~~~~~lv~e~~ 82 (282)
T cd07831 3 ILGKIGEGTFSEVLKAQSRKTGKYYAIKCMKKHFKSLEQVNNLREIQALRRLSPHPNILRLIEVLFDRKTGRLALVFELM 82 (282)
T ss_pred eEeeccccccceEEEEEEcCCCcEEEEEEehhccCCchhhhHHHHHHHHhhcCCCCCccceEEEEecCCCCcEEEEEecC
Confidence 345799999999999999999999999998754221 11122344433
Q ss_pred -----HHhhcCCcCCCHHHHHHHHHHHHHHHHHHhcCCcccccCCCCCceEEcCCceEEEeccccchhc
Q psy6828 95 -----DIMENEDVKLDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLVDSRWVVKLADFGLTEFK 158 (392)
Q Consensus 95 -----~~l~~~~~~l~~~~~~~i~~qi~~~l~ylH~~~iiiHrDlKp~NIll~~~~~~kl~DFGla~~~ 158 (392)
+++......+++.++..++.|++.||.|||++++ +||||||+||+++. +.+||+|||+++..
T Consensus 83 ~~~l~~~l~~~~~~~~~~~~~~~~~qi~~~L~~LH~~~i-~H~dl~p~ni~l~~-~~~kl~dfg~~~~~ 149 (282)
T cd07831 83 DMNLYELIKGRKRPLPEKRVKSYMYQLLKSLDHMHRNGI-FHRDIKPENILIKD-DILKLADFGSCRGI 149 (282)
T ss_pred CccHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCc-eecccCHHHEEEcC-CCeEEEeccccccc
Confidence 2222223358999999999999999999999999 99999999999999 99999999998754
No 294
>cd07837 STKc_CdkB_plant Catalytic domain of the Serine/Threonine Kinase, Plant B-type Cyclin-Dependent protein Kinase. Serine/Threonine Kinases (STKs), Plant B-type Cyclin-Dependent protein Kinase (CdkB) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CdkB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. The plant-specific B-type CDKs are expressed from the late S to the M phase of the cell cycle. They are characterized by the cyclin binding motif PPT[A/T]LRE. They play a role in controlling mitosis and integrating developm
Probab=99.72 E-value=8.3e-18 Score=157.33 Aligned_cols=111 Identities=23% Similarity=0.358 Sum_probs=88.3
Q ss_pred eeccCCCCCcceeEEEEEEEeecCcEEEEEEcCCCCh--hHHHHHHHHHHH-----------------------------
Q psy6828 46 SLSSNPDSDFRYSAIFTPIGIYKGRIFAIKRIPKKSV--DITRAMKKELKI----------------------------- 94 (392)
Q Consensus 46 ~~~~~~lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~~--~~~~~~~~E~~~----------------------------- 94 (392)
|...+.||+|+||.||++.+..+++.||+|.++.... ...+.+.+|+.+
T Consensus 3 y~~~~~lg~g~~g~vy~~~~~~~~~~v~lK~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~i~~~~~~~~~~~~~~~~~~~ 82 (295)
T cd07837 3 YEKLEKIGEGTYGKVYKARDKNTGKLVALKKTRLEMDEEGIPPTALREISLLQMLSESIYIVRLLDVEHVEEKNGKPSLY 82 (295)
T ss_pred ceEeeEecccCCeEEEEEEECCCCcEEEEEeehhhccccCCchHHHHHHHHHHHccCCCCccceeeeEeecCCCCCceEE
Confidence 3445679999999999999999999999998865422 123445556554
Q ss_pred -----------HHhhcC----CcCCCHHHHHHHHHHHHHHHHHHhcCCcccccCCCCCceEEcC-CceEEEeccccchh
Q psy6828 95 -----------DIMENE----DVKLDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLVDS-RWVVKLADFGLTEF 157 (392)
Q Consensus 95 -----------~~l~~~----~~~l~~~~~~~i~~qi~~~l~ylH~~~iiiHrDlKp~NIll~~-~~~~kl~DFGla~~ 157 (392)
+++... ...+++..+..++.||+.||.|||++++ +||||||+||+++. ++.+||+|||+++.
T Consensus 83 lv~e~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~L~~LH~~~i-~H~dl~~~nil~~~~~~~~kl~dfg~~~~ 160 (295)
T cd07837 83 LVFEYLDSDLKKFMDSNGRGPGRPLPAKTIKSFMYQLLKGVAHCHKHGV-MHRDLKPQNLLVDKQKGLLKIADLGLGRA 160 (295)
T ss_pred EEeeccCcCHHHHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHHCCe-eecCCChHHEEEecCCCeEEEeeccccee
Confidence 111110 2247999999999999999999999999 99999999999998 88999999998874
No 295
>cd06612 STKc_MST1_2 Catalytic domain of the Protein Serine/Threonine Kinases, Mammalian Ste20-like protein kinase 1 and 2. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 1 (MST1) and MST2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST1/2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST1, MST2, and related proteins including Drosophila Hippo and Dictyostelium discoideum Krs1 (kinase responsive to stress 1). MST1/2 and Hippo are involved in a conserved pathway that governs cell contact inhibition, organ size control, and tumor development. MST1 activates the mitogen-activated protein kinases (MAPKs) p38 and c-Jun N-terminal kinase (JNK) through MKK7 (a
Probab=99.72 E-value=1.4e-17 Score=152.30 Aligned_cols=112 Identities=29% Similarity=0.421 Sum_probs=94.8
Q ss_pred eeeccCCCCCcceeEEEEEEEeecCcEEEEEEcCCCChhHHHHHHHHHHH------------------------------
Q psy6828 45 VSLSSNPDSDFRYSAIFTPIGIYKGRIFAIKRIPKKSVDITRAMKKELKI------------------------------ 94 (392)
Q Consensus 45 ~~~~~~~lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~~~~~~~~~~E~~~------------------------------ 94 (392)
.|...+.+|+|+||.||++.+..+++.|++|.++.... .+.+.+|+.+
T Consensus 4 ~y~~~~~i~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~--~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~l~~e~~~ 81 (256)
T cd06612 4 VFDILEKLGEGSYGSVYKAIHKETGQVVAIKVVPVEED--LQEIIKEISILKQCDSPYIVKYYGSYFKNTDLWIVMEYCG 81 (256)
T ss_pred cchhhhhhcCCCCeEEEEEEEcCCCcEEEEEEeecHHH--HHHHHHHHHHHHhCCCCcEeeeeeeeecCCcEEEEEecCC
Confidence 35556779999999999999888899999999975532 5667777776
Q ss_pred -----HHhhcCCcCCCHHHHHHHHHHHHHHHHHHhcCCcccccCCCCCceEEcCCceEEEeccccchhcc
Q psy6828 95 -----DIMENEDVKLDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLVDSRWVVKLADFGLTEFKR 159 (392)
Q Consensus 95 -----~~l~~~~~~l~~~~~~~i~~qi~~~l~ylH~~~iiiHrDlKp~NIll~~~~~~kl~DFGla~~~~ 159 (392)
+++......+++..+..++.|++.||.|||+.++ +|+||+|+||++++++.+||+|||++....
T Consensus 82 ~~~L~~~l~~~~~~l~~~~~~~~~~~l~~~l~~lh~~~i-~H~dl~~~ni~~~~~~~~~l~dfg~~~~~~ 150 (256)
T cd06612 82 AGSVSDIMKITNKTLTEEEIAAILYQTLKGLEYLHSNKK-IHRDIKAGNILLNEEGQAKLADFGVSGQLT 150 (256)
T ss_pred CCcHHHHHHhCccCCCHHHHHHHHHHHHHHHHHHHHCCc-ccCCCCcceEEECCCCcEEEcccccchhcc
Confidence 3343334468999999999999999999999999 999999999999999999999999988654
No 296
>cd07855 STKc_ERK5 Catalytic domain of the Serine/Threonine Kinase, Extracellular signal-Regulated Kinase 5. Serine/Threonine Kinases (STKs), Extracellular signal-Regulated Kinase 5 (ERK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ERK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. ERK5, also called Big MAPK1 (BMK1) or MAPK7, has a unique C-terminal extension, making it approximately twice as big as other MAPKs. This extension contains transcriptional activation capability which is inhibited by the N-terminal half. ERK5 is activated in response to growth factors and stress by a cascade that leads to its phosphorylation by the
Probab=99.72 E-value=1.1e-17 Score=159.60 Aligned_cols=113 Identities=29% Similarity=0.463 Sum_probs=90.9
Q ss_pred eeeccCCCCCcceeEEEEEEEeecCcEEEEEEcCCCCh--hHHHHHHHHHHH----------------------------
Q psy6828 45 VSLSSNPDSDFRYSAIFTPIGIYKGRIFAIKRIPKKSV--DITRAMKKELKI---------------------------- 94 (392)
Q Consensus 45 ~~~~~~~lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~~--~~~~~~~~E~~~---------------------------- 94 (392)
.|...+.||+|+||.||++.+..+|+.||+|.+..... .....+.+|+.+
T Consensus 6 ~y~~~~~lg~g~~g~v~~~~~~~~~~~valK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~l 85 (334)
T cd07855 6 RYKPIENIGSGAYGVVCSAIDTRSGKKVAIKKIPHAFDVPTLAKRTLRELKILRHFKHDNIIAIRDILRPPGADFKDVYV 85 (334)
T ss_pred ceeeeeeeecCCCeEEEEEEEcCCCCEEEEEEeccccccccchHHHHHHHHHHHhcCCCCccCHHHhccccCCCCceEEE
Confidence 34455679999999999999999999999999876422 233445556554
Q ss_pred --HHhh-------cCCcCCCHHHHHHHHHHHHHHHHHHhcCCcccccCCCCCceEEcCCceEEEeccccchhc
Q psy6828 95 --DIME-------NEDVKLDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLVDSRWVVKLADFGLTEFK 158 (392)
Q Consensus 95 --~~l~-------~~~~~l~~~~~~~i~~qi~~~l~ylH~~~iiiHrDlKp~NIll~~~~~~kl~DFGla~~~ 158 (392)
+++. .....+++..+..++.|++.||.|||++++ +||||||+||+++.++.+||+|||++...
T Consensus 86 v~e~~~~~l~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~i-vH~dlkp~Nil~~~~~~~kl~dfg~~~~~ 157 (334)
T cd07855 86 VMDLMESDLHHIIHSDQPLTEEHIRYFLYQLLRGLKYIHSANV-IHRDLKPSNLLVNEDCELRIGDFGMARGL 157 (334)
T ss_pred EEehhhhhHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHCCe-ecCCCCHHHEEEcCCCcEEecccccceee
Confidence 1111 112358999999999999999999999999 99999999999999999999999998653
No 297
>cd05147 RIO1_euk RIO kinase family; eukaryotic RIO1, catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO1 is present in archaea, bacteria and eukaryotes. This subfamily is composed of RIO1 proteins from eukaryotes. RIO1 is essential for survival and is required for 18S rRNA processing, proper cell cycle progression and c
Probab=99.72 E-value=1.3e-17 Score=146.00 Aligned_cols=106 Identities=18% Similarity=0.153 Sum_probs=81.9
Q ss_pred CCCCCcceeEEEEEEEeecCcEEEEEEcCCCChh--H------------------------HHHHHHHHHH---------
Q psy6828 50 NPDSDFRYSAIFTPIGIYKGRIFAIKRIPKKSVD--I------------------------TRAMKKELKI--------- 94 (392)
Q Consensus 50 ~~lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~~~--~------------------------~~~~~~E~~~--------- 94 (392)
..||+|+||.||+|.+. +|+.||||+++..... . .....+|..+
T Consensus 3 ~~ig~G~~~~Vy~a~~~-~g~~vAvKv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~v 81 (190)
T cd05147 3 GCISTGKEANVYHATTA-NGEERAIKIYKTSILVFKDRDRYVSGEFRFRHGYCKSNPRKMVRTWAEKEMRNLKRLVTAGI 81 (190)
T ss_pred CccccccceEEEEEECC-CCCEEEEEEEEecccccccHHHhhcCCchhhccccCCCHHHHHHHHHHHHHHHHHHHHHCCC
Confidence 56999999999999986 8999999999654211 0 0112235443
Q ss_pred ---------------HHhhc--------CCcCCCHHHHHHHHHHHHHHHHHH-hcCCcccccCCCCCceEEcCCceEEEe
Q psy6828 95 ---------------DIMEN--------EDVKLDNMFIASLVADILRGMLYL-HDSALRYHGNLKASNCLVDSRWVVKLA 150 (392)
Q Consensus 95 ---------------~~l~~--------~~~~l~~~~~~~i~~qi~~~l~yl-H~~~iiiHrDlKp~NIll~~~~~~kl~ 150 (392)
+++.. ....+++..+..++.|++.+|.|+ |+.++ +||||||+|||++ ++.++|+
T Consensus 82 ~~p~~~~~~~~~iVmE~i~g~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~l~H~~gi-iHrDlkP~NIli~-~~~v~Li 159 (190)
T cd05147 82 PCPEPILLKSHVLVMEFIGDDGWAAPRLKDAPLSESKARELYLQVIQIMRILYQDCRL-VHADLSEYNLLYH-DGKLYII 159 (190)
T ss_pred CCCcEEEecCCEEEEEEeCCCCCcchhhhcCCCCHHHHHHHHHHHHHHHHHHHHhCCc-ccCCCCHHHEEEE-CCcEEEE
Confidence 22221 123578889999999999999999 69999 9999999999998 4789999
Q ss_pred ccccchhc
Q psy6828 151 DFGLTEFK 158 (392)
Q Consensus 151 DFGla~~~ 158 (392)
|||+|...
T Consensus 160 DFG~a~~~ 167 (190)
T cd05147 160 DVSQSVEH 167 (190)
T ss_pred EccccccC
Confidence 99998754
No 298
>cd07843 STKc_CDC2L1 Catalytic domain of the Serine/Threonine Kinase, Cell Division Cycle 2-like 1. Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 1 (CDC2L1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L1, also called PITSLRE, exists in different isoforms which are named using the alias CDK11(p). The CDC2L1 gene produces two protein products, CDK11(p110) and CDK11(p58). CDC2L1 is also represented by the caspase-processed CDK11(p46). CDK11(p110), the
Probab=99.72 E-value=9e-18 Score=157.08 Aligned_cols=114 Identities=25% Similarity=0.369 Sum_probs=91.4
Q ss_pred eeccCCCCCcceeEEEEEEEeecCcEEEEEEcCCCChh--HHHHHHHHHHH-----------------------------
Q psy6828 46 SLSSNPDSDFRYSAIFTPIGIYKGRIFAIKRIPKKSVD--ITRAMKKELKI----------------------------- 94 (392)
Q Consensus 46 ~~~~~~lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~~~--~~~~~~~E~~~----------------------------- 94 (392)
|...+.||+|+||.||+|.+..+++.+|+|.++..... ....+.+|+.+
T Consensus 7 y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~~~lv~e 86 (293)
T cd07843 7 YEKLNRIEEGTYGVVYRARDKKTGEIVALKKLKMEKEKEGFPITSLREINILLKLQHPNIVTVKEVVVGSNLDKIYMVME 86 (293)
T ss_pred hhhhhhhcCCCCeEEEEEEECCCCcEEEEEEEeeccccccchhhHHHHHHHHHhcCCCCEEEEEEEEEecCCCcEEEEeh
Confidence 34457899999999999999989999999999754321 22234556554
Q ss_pred -------HHhhcCCcCCCHHHHHHHHHHHHHHHHHHhcCCcccccCCCCCceEEcCCceEEEeccccchhccc
Q psy6828 95 -------DIMENEDVKLDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLVDSRWVVKLADFGLTEFKRD 160 (392)
Q Consensus 95 -------~~l~~~~~~l~~~~~~~i~~qi~~~l~ylH~~~iiiHrDlKp~NIll~~~~~~kl~DFGla~~~~~ 160 (392)
+++......+++.++..++.|++.||.|||++++ +|+||||+||+++.++.+||+|||++.....
T Consensus 87 ~~~~~L~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~i-~H~dl~p~nili~~~~~~~l~d~g~~~~~~~ 158 (293)
T cd07843 87 YVEHDLKSLMETMKQPFLQSEVKCLMLQLLSGVAHLHDNWI-LHRDLKTSNLLLNNRGILKICDFGLAREYGS 158 (293)
T ss_pred hcCcCHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCe-eeccCCHHHEEECCCCcEEEeecCceeeccC
Confidence 2222223358999999999999999999999999 9999999999999999999999999876543
No 299
>cd05041 PTKc_Fes_like Catalytic domain of Fes-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Fes subfamily; catalytic (c) domain. Fes subfamily members include Fes (or Fps), Fer, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr k
Probab=99.72 E-value=4.1e-17 Score=148.90 Aligned_cols=108 Identities=21% Similarity=0.327 Sum_probs=91.0
Q ss_pred CCCCCcceeEEEEEEEeecCcEEEEEEcCCCChh-HHHHHHHHHHH----------------------------------
Q psy6828 50 NPDSDFRYSAIFTPIGIYKGRIFAIKRIPKKSVD-ITRAMKKELKI---------------------------------- 94 (392)
Q Consensus 50 ~~lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~~~-~~~~~~~E~~~---------------------------------- 94 (392)
+.||+|+||.||++.+.. ++.||+|.+...... ..+.+.+|+.+
T Consensus 1 ~~lg~g~~g~v~~~~~~~-~~~v~~K~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~~~~~~l 79 (251)
T cd05041 1 EKIGKGNFGDVYKGVLKG-NTEVAVKTCRSTLPPDLKRKFLQEAEILKQYDHPNIVKLIGVCVQKQPIYIVMELVPGGSL 79 (251)
T ss_pred CccccCCCceEEEEEEeC-CCcEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCeEEEEEEEecCCCeEEEEEcCCCCcH
Confidence 368999999999999777 999999998765443 45677788776
Q ss_pred -HHhhcCCcCCCHHHHHHHHHHHHHHHHHHhcCCcccccCCCCCceEEcCCceEEEeccccchhcc
Q psy6828 95 -DIMENEDVKLDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLVDSRWVVKLADFGLTEFKR 159 (392)
Q Consensus 95 -~~l~~~~~~l~~~~~~~i~~qi~~~l~ylH~~~iiiHrDlKp~NIll~~~~~~kl~DFGla~~~~ 159 (392)
+++......+++..+..++.|++.||.|||++++ +||||||+||+++.++.+||+|||++....
T Consensus 80 ~~~l~~~~~~~~~~~~~~~~~~~~~~l~~lH~~~i-~h~di~p~nili~~~~~~~l~d~g~~~~~~ 144 (251)
T cd05041 80 LTFLRKKKNRLTVKKLLQMSLDAAAGMEYLESKNC-IHRDLAARNCLVGENNVLKISDFGMSREEE 144 (251)
T ss_pred HHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCE-ehhhcCcceEEEcCCCcEEEeecccccccc
Confidence 3343333468889999999999999999999999 999999999999999999999999987543
No 300
>cd08221 STKc_Nek9 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 9. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 9 (Nek9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek9 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek9, also called Nercc1, is primarily a cytoplasmic protein but can also localize in the nucleus. It is involved in modulating chromosome alignment and splitting during mitosis. It interacts with the gamma-tubulin ring complex and the Ran GTPase, and is implicated in microtubule organization. Nek9 associa
Probab=99.72 E-value=1.3e-17 Score=152.62 Aligned_cols=113 Identities=14% Similarity=0.219 Sum_probs=94.2
Q ss_pred eeccCCCCCcceeEEEEEEEeecCcEEEEEEcCCCC--hhHHHHHHHHHHH-----------------------------
Q psy6828 46 SLSSNPDSDFRYSAIFTPIGIYKGRIFAIKRIPKKS--VDITRAMKKELKI----------------------------- 94 (392)
Q Consensus 46 ~~~~~~lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~--~~~~~~~~~E~~~----------------------------- 94 (392)
|...+.+|+|+||.||.+.+..+++.+++|.+.... ....+.+.+|+.+
T Consensus 2 y~~~~~ig~g~~g~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~~~e~~ 81 (256)
T cd08221 2 YIPIRVLGKGAFGEATLYRRTEDDSLVVWKEVNLTRLSEKERRDALNEIVILSLLQHPNIIAYYNHFMDDNTLLIEMEYA 81 (256)
T ss_pred ceEeeEecccCCceEEEEEEcCCCcEEEEEEEeecccchhHHHHHHHHHHHHHhCCCCCeeEEEeEEecCCeEEEEEEec
Confidence 445678999999999999999999999999987543 2445567778776
Q ss_pred ------HHhhcC-CcCCCHHHHHHHHHHHHHHHHHHhcCCcccccCCCCCceEEcCCceEEEeccccchhcc
Q psy6828 95 ------DIMENE-DVKLDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLVDSRWVVKLADFGLTEFKR 159 (392)
Q Consensus 95 ------~~l~~~-~~~l~~~~~~~i~~qi~~~l~ylH~~~iiiHrDlKp~NIll~~~~~~kl~DFGla~~~~ 159 (392)
+++... ...+++.++..++.|++.||.|||+.++ +|+||||+||+++.++.+||+|||++....
T Consensus 82 ~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~i-~h~dl~p~ni~~~~~~~~kl~d~~~~~~~~ 152 (256)
T cd08221 82 NGGTLYDKIVRQKGQLFEEEMVLWYLFQIVSAVSYIHKAGI-LHRDIKTLNIFLTKAGLIKLGDFGISKILG 152 (256)
T ss_pred CCCcHHHHHHhccccCCCHHHHHHHHHHHHHHHHHHHhCCc-cccCCChHhEEEeCCCCEEECcCcceEEcc
Confidence 333322 3458999999999999999999999999 999999999999999999999999987653
No 301
>cd05049 PTKc_Trk Catalytic domain of the Protein Tyrosine Kinases, Tropomyosin Related Kinases. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase (Trk) subfamily; catalytic (c) domain. The Trk subfamily consists of TrkA, TrkB, TrkC, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Trk subfamily members are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, the nerve growth factor (NGF) family of neutrotrophins, leads to Trk receptor oligomerization and activation of the catalyt
Probab=99.72 E-value=2.8e-17 Score=152.50 Aligned_cols=112 Identities=20% Similarity=0.353 Sum_probs=90.6
Q ss_pred eeccCCCCCcceeEEEEEEEee-----cCcEEEEEEcCCCChh-HHHHHHHHHHH-------------------------
Q psy6828 46 SLSSNPDSDFRYSAIFTPIGIY-----KGRIFAIKRIPKKSVD-ITRAMKKELKI------------------------- 94 (392)
Q Consensus 46 ~~~~~~lg~G~~g~V~~~~~~~-----~~~~vAiK~~~~~~~~-~~~~~~~E~~~------------------------- 94 (392)
|...+.+|+|+||.||+|.+.. +++.||+|.+...... ..+.+.+|+.+
T Consensus 7 ~~~~~~lg~g~~~~v~~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv 86 (280)
T cd05049 7 IVLKRELGEGAFGKVFLGECYHLEPENDKELVAVKTLKETASNDARKDFEREAELLTNFQHENIVKFYGVCTEGDPPIMV 86 (280)
T ss_pred hhHHhhccccCCceEeeeeeccccCcCCcceEEEEeecccCCHHHHHHHHHHHHHHHhcCCCCchheeeEEecCCCeEEE
Confidence 3445779999999999998653 3578999999765443 45678888776
Q ss_pred ----------HHhhcC-------------CcCCCHHHHHHHHHHHHHHHHHHhcCCcccccCCCCCceEEcCCceEEEec
Q psy6828 95 ----------DIMENE-------------DVKLDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLVDSRWVVKLAD 151 (392)
Q Consensus 95 ----------~~l~~~-------------~~~l~~~~~~~i~~qi~~~l~ylH~~~iiiHrDlKp~NIll~~~~~~kl~D 151 (392)
+++... ...+++.++..++.|++.|+.|||++++ +||||||+||+++.++.+||+|
T Consensus 87 ~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lH~~~i-~h~dlkp~nili~~~~~~kl~d 165 (280)
T cd05049 87 FEYMEHGDLNKFLRSHGPDAAFLKSPDSPMGELTLSQLLQIAVQIASGMVYLASQHF-VHRDLATRNCLVGYDLVVKIGD 165 (280)
T ss_pred EecCCCCCHHHHHHhcCCchhhhcccccccccccHHHHHHHHHHHHHHHHHHhhCCe-eccccccceEEEcCCCeEEECC
Confidence 222211 1247888999999999999999999999 9999999999999999999999
Q ss_pred cccchhc
Q psy6828 152 FGLTEFK 158 (392)
Q Consensus 152 FGla~~~ 158 (392)
||+++..
T Consensus 166 ~g~~~~~ 172 (280)
T cd05049 166 FGMSRDV 172 (280)
T ss_pred cccceec
Confidence 9998753
No 302
>cd07846 STKc_CDKL2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 2 and 3. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 2 (CDKL2) and CDKL3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL2 and CDKL3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL2, also called p56 KKIAMRE, is expressed in testis, kidney, lung, and brain. It functions mainly in mature neurons and plays an important role in learning and memory. Inactivation of CDKL3, also called NKI
Probab=99.72 E-value=1.2e-17 Score=155.39 Aligned_cols=111 Identities=23% Similarity=0.357 Sum_probs=90.1
Q ss_pred eccCCCCCcceeEEEEEEEeecCcEEEEEEcCCCCh--hHHHHHHHHHHH--------------------------HHhh
Q psy6828 47 LSSNPDSDFRYSAIFTPIGIYKGRIFAIKRIPKKSV--DITRAMKKELKI--------------------------DIME 98 (392)
Q Consensus 47 ~~~~~lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~~--~~~~~~~~E~~~--------------------------~~l~ 98 (392)
...+.||+|+||.||+|.+..+++.||+|.+.+... ...+.+.+|+.+ +++.
T Consensus 4 ~~~~~lg~g~~~~vy~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~ 83 (286)
T cd07846 4 ENLGLVGEGSYGMVMKCKHKETGQIVAIKKFLESEDDKMVKKIAMREIRMLKQLRHENLVNLIEVFRRKKRLYLVFEFVD 83 (286)
T ss_pred eEeeeeccCCCeEEEEEEECCCCCEEEEEeHhhccCcchhhHHHHHHHHHHHhcCCcchhhHHHhcccCCeEEEEEecCC
Confidence 345679999999999999988999999999865432 223456666655 2221
Q ss_pred --------cCCcCCCHHHHHHHHHHHHHHHHHHhcCCcccccCCCCCceEEcCCceEEEeccccchhc
Q psy6828 99 --------NEDVKLDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLVDSRWVVKLADFGLTEFK 158 (392)
Q Consensus 99 --------~~~~~l~~~~~~~i~~qi~~~l~ylH~~~iiiHrDlKp~NIll~~~~~~kl~DFGla~~~ 158 (392)
.....+++.++..++.|++.||.|||+.++ +|+||+|+||++++++.++|+|||++...
T Consensus 84 ~~~l~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~i-~h~~l~p~ni~~~~~~~~~l~dfg~~~~~ 150 (286)
T cd07846 84 HTVLDDLEKYPNGLDESRVRKYLFQILRGIEFCHSHNI-IHRDIKPENILVSQSGVVKLCDFGFARTL 150 (286)
T ss_pred ccHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCc-cccCCCHHHEEECCCCcEEEEeeeeeeec
Confidence 122248999999999999999999999999 99999999999999999999999998754
No 303
>cd07836 STKc_Pho85 Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Pho85. Serine/Threonine Kinases (STKs), Pho85 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Pho85 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Pho85 is a multifunctional Cyclin-Dependent protein Kinase (CDK) in yeast. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Pho85 is regulated by 10 different cyclins (Pcls) and plays a role in G1 progression, cell polarity, phosphate and glycogen metabolism, gene expression, and in signaling changes in the environment.
Probab=99.72 E-value=1.2e-17 Score=155.20 Aligned_cols=111 Identities=24% Similarity=0.389 Sum_probs=90.7
Q ss_pred eccCCCCCcceeEEEEEEEeecCcEEEEEEcCCCCh-hHHHHHHHHHHH-------------------------------
Q psy6828 47 LSSNPDSDFRYSAIFTPIGIYKGRIFAIKRIPKKSV-DITRAMKKELKI------------------------------- 94 (392)
Q Consensus 47 ~~~~~lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~~-~~~~~~~~E~~~------------------------------- 94 (392)
...+.||+|++|.||+|.+..+|+.||||.+..... ...+.+.+|+.+
T Consensus 3 ~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~ 82 (284)
T cd07836 3 KQLEKLGEGTYATVYKGRNRTTGEIVALKEIHLDAEEGTPSTAIREISLMKELKHENIVRLHDVIHTENKLMLVFEYMDK 82 (284)
T ss_pred eEeeeeccCCceEEEEEEECCCCeEEEEEEecccccccchHHHHHHHHHHHhhcCCCEeeeeeeEeeCCcEEEEEecCCc
Confidence 345679999999999999999999999999875432 223445566665
Q ss_pred ---HHhhcCC--cCCCHHHHHHHHHHHHHHHHHHhcCCcccccCCCCCceEEcCCceEEEeccccchhc
Q psy6828 95 ---DIMENED--VKLDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLVDSRWVVKLADFGLTEFK 158 (392)
Q Consensus 95 ---~~l~~~~--~~l~~~~~~~i~~qi~~~l~ylH~~~iiiHrDlKp~NIll~~~~~~kl~DFGla~~~ 158 (392)
+++.... ..+++..+..++.|++.||.|||++++ +||||||+||++++++.++++|||++...
T Consensus 83 ~l~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i-~h~dl~p~ni~~~~~~~~~l~d~g~~~~~ 150 (284)
T cd07836 83 DLKKYMDTHGVRGALDPNTVKSFTYQLLKGIAFCHENRV-LHRDLKPQNLLINKRGELKLADFGLARAF 150 (284)
T ss_pred cHHHHHHhcCCCCCcCHHHHHHHHHHHHHHHHHHHHCCe-eeCCCCHHHEEECCCCcEEEeecchhhhh
Confidence 2222221 358999999999999999999999999 99999999999999999999999998754
No 304
>cd05051 PTKc_DDR Catalytic domain of the Protein Tyrosine Kinases, Discoidin Domain Receptors. Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR) subfamily; catalytic (c) domain. The DDR subfamily consists of homologs of mammalian DDR1, DDR2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR subfamily members are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linke
Probab=99.72 E-value=4.1e-17 Score=152.71 Aligned_cols=113 Identities=20% Similarity=0.289 Sum_probs=91.0
Q ss_pred eeeccCCCCCcceeEEEEEEEeecC----------------cEEEEEEcCCCCh-hHHHHHHHHHHH-------------
Q psy6828 45 VSLSSNPDSDFRYSAIFTPIGIYKG----------------RIFAIKRIPKKSV-DITRAMKKELKI------------- 94 (392)
Q Consensus 45 ~~~~~~~lg~G~~g~V~~~~~~~~~----------------~~vAiK~~~~~~~-~~~~~~~~E~~~------------- 94 (392)
.+...+.||+|+||.||++.+..++ ..||+|.+..... ...+.+.+|+.+
T Consensus 6 ~~~~~~~lg~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~ 85 (296)
T cd05051 6 PLNFVEKLGEGQFGEVHLCEADGLQDFSEKAFAENDNADAPVLVAVKVLRPDASDNAREDFLKEVKILSRLSDPNIARLL 85 (296)
T ss_pred hCcccccccCCCCccEEEEEeccCCcccccccccccccCCceeEEEEEecCccCHHHHHHHHHHHHHHHhcCCCCEeEEE
Confidence 4556788999999999999876543 4689999976542 445667778766
Q ss_pred ----------------------HHhhcCC----------cCCCHHHHHHHHHHHHHHHHHHhcCCcccccCCCCCceEEc
Q psy6828 95 ----------------------DIMENED----------VKLDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLVD 142 (392)
Q Consensus 95 ----------------------~~l~~~~----------~~l~~~~~~~i~~qi~~~l~ylH~~~iiiHrDlKp~NIll~ 142 (392)
+++.... ..+++..+..++.|++.||.|||++++ +||||||+||+++
T Consensus 86 ~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~al~~LH~~~i-~H~dlkp~Nili~ 164 (296)
T cd05051 86 GVCTVDPPLCMIMEYMENGDLNQFLQKHVAETSGLACNSKSLSFSTLLYMATQIASGMRYLESLNF-VHRDLATRNCLVG 164 (296)
T ss_pred EEEecCCCcEEEEecCCCCCHHHHHHhcccccccccccCCCCCHHHHHHHHHHHHHHHHHHHHcCc-cccccchhceeec
Confidence 2222211 158899999999999999999999999 9999999999999
Q ss_pred CCceEEEeccccchhc
Q psy6828 143 SRWVVKLADFGLTEFK 158 (392)
Q Consensus 143 ~~~~~kl~DFGla~~~ 158 (392)
.++.++|+|||+++..
T Consensus 165 ~~~~~~l~dfg~~~~~ 180 (296)
T cd05051 165 KNYTIKIADFGMSRNL 180 (296)
T ss_pred CCCceEEccccceeec
Confidence 9999999999998753
No 305
>PTZ00024 cyclin-dependent protein kinase; Provisional
Probab=99.72 E-value=8.2e-18 Score=160.56 Aligned_cols=116 Identities=23% Similarity=0.384 Sum_probs=92.7
Q ss_pred cceeeec-cCCCCCcceeEEEEEEEeecCcEEEEEEcCCCChhH--------------HHHHHHHHHH------------
Q psy6828 42 TSQVSLS-SNPDSDFRYSAIFTPIGIYKGRIFAIKRIPKKSVDI--------------TRAMKKELKI------------ 94 (392)
Q Consensus 42 ~~~~~~~-~~~lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~~~~--------------~~~~~~E~~~------------ 94 (392)
.+++|.. .+.||+|+||+||++.+..+++.||||.+....... ...+.+|+.+
T Consensus 6 ~~~ry~~~~~~ig~G~~g~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~ 85 (335)
T PTZ00024 6 ISERYIQKGAHLGEGTYGKVEKAYDTLTGKIVAIKKVKIIEISNDVTKDRQLVGMCGIHFTTLRELKIMNEIKHENIMGL 85 (335)
T ss_pred cccchhhhhhcccCCCceeEEEEEECCCCCeEEEEEeeccccccccccchhhhcccccchhHHHHHHHHHhCCCcceeee
Confidence 4555654 567999999999999999999999999986543211 1135566655
Q ss_pred ----------------------HHhhcCCcCCCHHHHHHHHHHHHHHHHHHhcCCcccccCCCCCceEEcCCceEEEecc
Q psy6828 95 ----------------------DIMENEDVKLDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLVDSRWVVKLADF 152 (392)
Q Consensus 95 ----------------------~~l~~~~~~l~~~~~~~i~~qi~~~l~ylH~~~iiiHrDlKp~NIll~~~~~~kl~DF 152 (392)
+++.. ...+++..+..++.|++.||.|||++++ +|+||||+||+++.++.+||+||
T Consensus 86 ~~~~~~~~~~~lv~e~~~~~l~~~l~~-~~~~~~~~~~~~~~ql~~aL~~LH~~~i-~H~dl~~~nill~~~~~~kl~df 163 (335)
T PTZ00024 86 VDVYVEGDFINLVMDIMASDLKKVVDR-KIRLTESQVKCILLQILNGLNVLHKWYF-MHRDLSPANIFINSKGICKIADF 163 (335)
T ss_pred eEEEecCCcEEEEEeccccCHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHhCCe-ecccccHHHeEECCCCCEEECCc
Confidence 22222 2258999999999999999999999999 99999999999999999999999
Q ss_pred ccchhcc
Q psy6828 153 GLTEFKR 159 (392)
Q Consensus 153 Gla~~~~ 159 (392)
|+++...
T Consensus 164 g~~~~~~ 170 (335)
T PTZ00024 164 GLARRYG 170 (335)
T ss_pred cceeecc
Confidence 9987544
No 306
>KOG0199|consensus
Probab=99.72 E-value=2.3e-17 Score=161.31 Aligned_cols=133 Identities=20% Similarity=0.235 Sum_probs=108.3
Q ss_pred cCCCCCcceeEEEEEEEeecC-c--EEEEEEcCCCChh-HHHHHHHHHHH------------------------------
Q psy6828 49 SNPDSDFRYSAIFTPIGIYKG-R--IFAIKRIPKKSVD-ITRAMKKELKI------------------------------ 94 (392)
Q Consensus 49 ~~~lg~G~~g~V~~~~~~~~~-~--~vAiK~~~~~~~~-~~~~~~~E~~~------------------------------ 94 (392)
.+.||+|+||+|++|.+...+ + .||||++....+. ....|.+|+.+
T Consensus 115 ~e~LG~GsFgvV~rg~Wt~psgk~V~VAVKclr~d~l~~~mddflrEas~M~~L~H~hliRLyGvVl~qp~mMV~ELapl 194 (1039)
T KOG0199|consen 115 YELLGEGSFGVVKRGTWTQPSGKHVNVAVKCLRDDSLNAIMDDFLREASHMLKLQHPHLIRLYGVVLDQPAMMVFELAPL 194 (1039)
T ss_pred HHHhcCcceeeEeeccccCCCCcEEeEEEEeccCCccchhHHHHHHHHHHHHhccCcceeEEeeeeccchhhHHhhhccc
Confidence 567999999999999877643 3 5899999877764 67789999887
Q ss_pred ----HHhhc-CCcCCCHHHHHHHHHHHHHHHHHHhcCCcccccCCCCCceEEcCCceEEEeccccchhccccccc-----
Q psy6828 95 ----DIMEN-EDVKLDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLVDSRWVVKLADFGLTEFKRDAEYT----- 164 (392)
Q Consensus 95 ----~~l~~-~~~~l~~~~~~~i~~qi~~~l~ylH~~~iiiHrDlKp~NIll~~~~~~kl~DFGla~~~~~~~~~----- 164 (392)
+.|.. ....|.-...+.|+.||+.|+.||.+++. |||||...|+|+.....+||+||||.+.+..+...
T Consensus 195 GSLldrLrka~~~~llv~~Lcdya~QiA~aM~YLeskrl-vHRDLAARNlllasprtVKI~DFGLmRaLg~ned~Yvm~p 273 (1039)
T KOG0199|consen 195 GSLLDRLRKAKKAILLVSRLCDYAMQIAKAMQYLESKRL-VHRDLAARNLLLASPRTVKICDFGLMRALGENEDMYVMAP 273 (1039)
T ss_pred chHHHHHhhccccceeHHHHHHHHHHHHHHHHHHhhhhh-hhhhhhhhhheecccceeeeecccceeccCCCCcceEecC
Confidence 22222 33357777889999999999999999999 99999999999999999999999999987554421
Q ss_pred ---------------------cccccceeeeeeeccCCC
Q psy6828 165 ---------------------GTDQHSFLQHTYHVNRAG 182 (392)
Q Consensus 165 ---------------------~~d~~s~g~~~~~~~~~~ 182 (392)
..|+|+||+++||.-.|+
T Consensus 274 ~rkvPfAWCaPEsLrh~kFShaSDvWmyGVTiWEMFtyG 312 (1039)
T KOG0199|consen 274 QRKVPFAWCAPESLRHRKFSHASDVWMYGVTIWEMFTYG 312 (1039)
T ss_pred CCcCcccccCHhHhccccccccchhhhhhhhHHhhhccC
Confidence 239999999999944333
No 307
>KOG0603|consensus
Probab=99.72 E-value=4.3e-18 Score=165.63 Aligned_cols=168 Identities=19% Similarity=0.128 Sum_probs=117.2
Q ss_pred eeccCCCCCcceeEEEEEEEeecCcEEEEEEcCCCChhHHHHHHHHHHH---------------------------HHhh
Q psy6828 46 SLSSNPDSDFRYSAIFTPIGIYKGRIFAIKRIPKKSVDITRAMKKELKI---------------------------DIME 98 (392)
Q Consensus 46 ~~~~~~lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~~~~~~~~~~E~~~---------------------------~~l~ 98 (392)
|.....+|.|+|+.|..+.+..+++.+++|++.+...+.. +|+.+ +.++
T Consensus 324 y~~~~~~~~gs~s~~~~~~~~~t~~~~~vkii~~~~~~~~----~e~~~~~~~~~h~niv~~~~v~~~~~~~~~v~e~l~ 399 (612)
T KOG0603|consen 324 YEFREELGEGSFSAVKYCESSPTDQEPAVKIISKRADDNQ----DEIPISLLVRDHPNIVKSHDVYEDGKEIYLVMELLD 399 (612)
T ss_pred hccccccCCCCccceeeeeccccccchhheeccccccccc----cccchhhhhcCCCcceeecceecCCceeeeeehhcc
Confidence 4445569999999999999999999999999987632211 12211 1111
Q ss_pred cCC-------cCCCHHHHHHHHHHHHHHHHHHhcCCcccccCCCCCceEE-cCCceEEEeccccchhccccccc------
Q psy6828 99 NED-------VKLDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLV-DSRWVVKLADFGLTEFKRDAEYT------ 164 (392)
Q Consensus 99 ~~~-------~~l~~~~~~~i~~qi~~~l~ylH~~~iiiHrDlKp~NIll-~~~~~~kl~DFGla~~~~~~~~~------ 164 (392)
.+. .+....++..|++||+.|+.|||++|+ +||||||+|||+ ++.++++|+|||.++..+....+
T Consensus 400 g~ell~ri~~~~~~~~e~~~w~~~lv~Av~~LH~~gv-vhRDLkp~NIL~~~~~g~lrltyFG~a~~~~~~~~tp~~t~~ 478 (612)
T KOG0603|consen 400 GGELLRRIRSKPEFCSEASQWAAELVSAVDYLHEQGV-VHRDLKPGNILLDGSAGHLRLTYFGFWSELERSCDTPALTLQ 478 (612)
T ss_pred ccHHHHHHHhcchhHHHHHHHHHHHHHHHHHHHhcCe-eecCCChhheeecCCCCcEEEEEechhhhCchhhcccchhhc
Confidence 111 022336777899999999999999999 999999999999 68899999999999877655211
Q ss_pred --------------cccccceeeeeee--ccCCCC----cc-------------cccccccchhhhccCCHHHHHHhhcC
Q psy6828 165 --------------GTDQHSFLQHTYH--VNRAGS----TE-------------SLHCKCDEALLFEMLPRSVAEQLRRG 211 (392)
Q Consensus 165 --------------~~d~~s~g~~~~~--~~~~~~----~~-------------~~d~~~~~~lL~~~lp~~v~~~l~~~ 211 (392)
..|+||||+++|+ ....+. .. ..-......++.++|..+...|+..+
T Consensus 479 y~APEvl~~~~yt~acD~WSLGvlLy~ML~G~tp~~~~P~~~ei~~~i~~~~~s~~vS~~AKdLl~~LL~~dP~~Rl~~~ 558 (612)
T KOG0603|consen 479 YVAPEVLAIQEYTEACDWWSLGVLLYEMLTGRTLFAAHPAGIEIHTRIQMPKFSECVSDEAKDLLQQLLQVDPALRLGAD 558 (612)
T ss_pred ccChhhhccCCCCcchhhHHHHHHHHHHHhCCCccccCCchHHHHHhhcCCccccccCHHHHHHHHHhccCChhhCcChh
Confidence 2399999999999 111111 11 00013456677777777777777655
Q ss_pred CCccccc
Q psy6828 212 TSVEAES 218 (392)
Q Consensus 212 ~~~~~~~ 218 (392)
.....++
T Consensus 559 ~i~~h~w 565 (612)
T KOG0603|consen 559 EIGAHPW 565 (612)
T ss_pred hhccCcc
Confidence 4444443
No 308
>cd05042 PTKc_Aatyk Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases. Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase (Aatyk) subfamily; catalytic (c) domain. The Aatyk subfamily is also referred to as the lemur tyrosine kinase (Lmtk) subfamily. It consists of Aatyk1 (Lmtk1), Aatyk2 (Lmtk2, Brek), Aatyk3 (Lmtk3), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk proteins are mostly receptor tyr kinases (RTKs) containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 does not contain a transmembrane segment and is a cytoplasmic (or nonreceptor) kinase. Aatyk proteins are classified as tyr kina
Probab=99.72 E-value=3e-17 Score=151.56 Aligned_cols=106 Identities=15% Similarity=0.295 Sum_probs=82.4
Q ss_pred CCCCcceeEEEEEEEee--cCcEEEEEEcCCCCh-hHHHHHHHHHHH---------------------------------
Q psy6828 51 PDSDFRYSAIFTPIGIY--KGRIFAIKRIPKKSV-DITRAMKKELKI--------------------------------- 94 (392)
Q Consensus 51 ~lg~G~~g~V~~~~~~~--~~~~vAiK~~~~~~~-~~~~~~~~E~~~--------------------------------- 94 (392)
.||+|+||+||+|.... ....+|+|.+..... .....+.+|+..
T Consensus 2 ~lg~G~fg~v~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~e~~~~~~l~h~nii~~~~~~~~~~~~~lv~e~~~~g~ 81 (269)
T cd05042 2 EIGNGWFGKVLLGEAHRGMSKARVVVKELRASATPDEQLLFLQEVQPYRELNHPNVLQCLGQCIESIPYLLVLEFCPLGD 81 (269)
T ss_pred cCCccCCceEEEEEEecCCCCeEEEEeecCccCChHHHHHHHHHHHHHHhCCCCCcceEEEEECCCCceEEEEEeCCCCc
Confidence 58999999999996443 345789998865432 334456677665
Q ss_pred --HHhhcCC----cCCCHHHHHHHHHHHHHHHHHHhcCCcccccCCCCCceEEcCCceEEEeccccchh
Q psy6828 95 --DIMENED----VKLDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLVDSRWVVKLADFGLTEF 157 (392)
Q Consensus 95 --~~l~~~~----~~l~~~~~~~i~~qi~~~l~ylH~~~iiiHrDlKp~NIll~~~~~~kl~DFGla~~ 157 (392)
+++.... ..+++..+..++.|++.||.|||++++ +||||||+|||++.++.+||+|||++..
T Consensus 82 L~~~l~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i-vH~dlkp~Nill~~~~~~kl~dfg~~~~ 149 (269)
T cd05042 82 LKNYLRSNRGMVAQMAQKDVLQRMACEVASGLLWLHQADF-IHSDLALRNCQLTADLSVKIGDYGLALE 149 (269)
T ss_pred HHHHHHhccccccccccHHHHHHHHHHHHHHHHHHHhcCE-ecccccHhheEecCCCcEEEeccccccc
Confidence 2222211 124677788999999999999999999 9999999999999999999999999864
No 309
>cd05047 PTKc_Tie Catalytic domain of Tie Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Tie subfamily; catalytic (c) domain. The Tie subfamily consists of Tie1 and Tie2. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie proteins are receptor tyr kinases (RTKs) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2, while no specific l
Probab=99.72 E-value=2.5e-17 Score=152.26 Aligned_cols=105 Identities=30% Similarity=0.430 Sum_probs=84.3
Q ss_pred CCCCcceeEEEEEEEeecCc--EEEEEEcCCCC-hhHHHHHHHHHHH---------------------------------
Q psy6828 51 PDSDFRYSAIFTPIGIYKGR--IFAIKRIPKKS-VDITRAMKKELKI--------------------------------- 94 (392)
Q Consensus 51 ~lg~G~~g~V~~~~~~~~~~--~vAiK~~~~~~-~~~~~~~~~E~~~--------------------------------- 94 (392)
.||+|+||.||++....++. .+|+|.+.... ....+.+.+|+.+
T Consensus 2 ~lg~g~~g~v~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~lv~e~~~~~ 81 (270)
T cd05047 2 VIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLLGACEHRGYLYLAIEYAPHG 81 (270)
T ss_pred cCCCCCCceEEEEEEcCCCCeeEEEEEEccccCCHHHHHHHHHHHHHHHhhccCCCeeeEEEEEecCCCceEEEEeCCCC
Confidence 58999999999999887775 46889887532 2344556677665
Q ss_pred ---HHhhcC---------------CcCCCHHHHHHHHHHHHHHHHHHhcCCcccccCCCCCceEEcCCceEEEeccccch
Q psy6828 95 ---DIMENE---------------DVKLDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLVDSRWVVKLADFGLTE 156 (392)
Q Consensus 95 ---~~l~~~---------------~~~l~~~~~~~i~~qi~~~l~ylH~~~iiiHrDlKp~NIll~~~~~~kl~DFGla~ 156 (392)
+++... ...+++.++..++.|++.||.|||++++ +||||||+||+++.++.+|++|||++.
T Consensus 82 ~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~al~~lH~~~i-~H~dikp~nili~~~~~~kl~dfgl~~ 160 (270)
T cd05047 82 NLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQKQF-IHRDLAARNILVGENYVAKIADFGLSR 160 (270)
T ss_pred cHHHHHHhccccccccccccccCCcCCCCHHHHHHHHHHHHHHHHHHHHCCE-eecccccceEEEcCCCeEEECCCCCcc
Confidence 222111 1147888999999999999999999999 999999999999999999999999985
No 310
>cd05572 STKc_cGK_PKG Catalytic domain of the Protein Serine/Threonine Kinase, cGMP-dependent protein kinase. Serine/Threonine Kinases (STKs), cGMP-dependent protein kinase (cGK or PKG) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mammals have two cGK isoforms from different genes, cGKI and cGKII. cGKI exists as two splice variants, cGKI-alpha and cGKI-beta. cGK consists of an N-terminal regulatory domain containing a dimerization and an autoinhibitory pseudosubstrate region, two cGMP-binding domains, and a C-terminal catalytic domain. Binding of cGMP to both binding sites releases the inhibition of the catalytic center by the pseudosubstrate region, allowi
Probab=99.72 E-value=2.9e-17 Score=150.91 Aligned_cols=107 Identities=24% Similarity=0.296 Sum_probs=90.1
Q ss_pred CCCcceeEEEEEEEeecCcEEEEEEcCCCCh---hHHHHHHHHHHH----------------------------------
Q psy6828 52 DSDFRYSAIFTPIGIYKGRIFAIKRIPKKSV---DITRAMKKELKI---------------------------------- 94 (392)
Q Consensus 52 lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~~---~~~~~~~~E~~~---------------------------------- 94 (392)
||+|+||.||++.+..+++.||+|.+.+... ...+.+.+|+.+
T Consensus 1 lg~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L 80 (262)
T cd05572 1 LGVGGFGRVELVKVKSKNRTFALKCVKKRHIVETGQQEHIFSEKEILEECNHPFIVKLYRTFKDKKYIYMLMEYCLGGEL 80 (262)
T ss_pred CCCCCceEEEEEEECCCCcEEEEEEEehhcchhhhHHHHHHHHHHHHHhCCCCCEeeeeeeEEcCCccEEEEecCCCCcH
Confidence 6899999999999988999999999976432 334567777766
Q ss_pred -HHhhcCCcCCCHHHHHHHHHHHHHHHHHHhcCCcccccCCCCCceEEcCCceEEEeccccchhccc
Q psy6828 95 -DIMENEDVKLDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLVDSRWVVKLADFGLTEFKRD 160 (392)
Q Consensus 95 -~~l~~~~~~l~~~~~~~i~~qi~~~l~ylH~~~iiiHrDlKp~NIll~~~~~~kl~DFGla~~~~~ 160 (392)
+++.+. ..+++..+..++.|++.||.|||++++ +|+||||+||+++.++.++|+|||+++....
T Consensus 81 ~~~l~~~-~~l~~~~~~~~~~~i~~~l~~lH~~~~-~h~dl~~~nilv~~~~~~~l~df~~~~~~~~ 145 (262)
T cd05572 81 WTILRDR-GLFDEYTARFYIACVVLAFEYLHNRGI-IYRDLKPENLLLDSNGYVKLVDFGFAKKLKS 145 (262)
T ss_pred HHHHhhc-CCCCHHHHHHHHHHHHHHHHHHhhCCc-ccCCCCHHHEEEcCCCCEEEeeCCcccccCc
Confidence 233222 258999999999999999999999999 9999999999999999999999999886543
No 311
>PHA03390 pk1 serine/threonine-protein kinase 1; Provisional
Probab=99.72 E-value=1.8e-17 Score=153.21 Aligned_cols=124 Identities=20% Similarity=0.280 Sum_probs=95.5
Q ss_pred CCCcceeEEEEEEEeecCcEEEEEEcCCCChhHHHHHHHHHHH-------------------------------HHhhcC
Q psy6828 52 DSDFRYSAIFTPIGIYKGRIFAIKRIPKKSVDITRAMKKELKI-------------------------------DIMENE 100 (392)
Q Consensus 52 lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~~~~~~~~~~E~~~-------------------------------~~l~~~ 100 (392)
+|+|+||.||++.++.+++.+|+|.+........+....++.. +++.+.
T Consensus 24 lg~g~~g~v~~~~~~~~~~~~~~k~~~~~~~~~~e~~~~~~~~~h~~iv~~~~~~~~~~~~~iv~e~~~~~~L~~~l~~~ 103 (267)
T PHA03390 24 LIDGKFGKVSVLKHKPTQKLFVQKIIKAKNFNAIEPMVHQLMKDNPNFIKLYYSVTTLKGHVLIMDYIKDGDLFDLLKKE 103 (267)
T ss_pred ecCCCceEEEEEEEcCCCcEEEEEEEehhhcchhhHHHHHHhhcCCCEEEEEEEEecCCeeEEEEEcCCCCcHHHHHHhc
Confidence 6999999999999999999999999976543322222222211 333333
Q ss_pred CcCCCHHHHHHHHHHHHHHHHHHhcCCcccccCCCCCceEEcCCc-eEEEeccccchhccccc-----------------
Q psy6828 101 DVKLDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLVDSRW-VVKLADFGLTEFKRDAE----------------- 162 (392)
Q Consensus 101 ~~~l~~~~~~~i~~qi~~~l~ylH~~~iiiHrDlKp~NIll~~~~-~~kl~DFGla~~~~~~~----------------- 162 (392)
. .+++.++..++.|++.||.|||+.++ +||||||+||+++.++ .++++|||+++......
T Consensus 104 ~-~l~~~~~~~~~~qi~~~l~~lH~~~i-~H~dl~p~nil~~~~~~~~~l~dfg~~~~~~~~~~~~~~~~y~aPE~~~~~ 181 (267)
T PHA03390 104 G-KLSEAEVKKIIRQLVEALNDLHKHNI-IHNDIKLENVLYDRAKDRIYLCDYGLCKIIGTPSCYDGTLDYFSPEKIKGH 181 (267)
T ss_pred C-CCCHHHHHHHHHHHHHHHHHHHhCCe-eeCCCCHHHEEEeCCCCeEEEecCccceecCCCccCCCCCcccChhhhcCC
Confidence 2 79999999999999999999999999 9999999999999998 99999999887543211
Q ss_pred --cccccccceeeeeee
Q psy6828 163 --YTGTDQHSFLQHTYH 177 (392)
Q Consensus 163 --~~~~d~~s~g~~~~~ 177 (392)
....|+||+|+++|+
T Consensus 182 ~~~~~~DvwslG~il~~ 198 (267)
T PHA03390 182 NYDVSFDWWAVGVLTYE 198 (267)
T ss_pred CCCchhhHHHHHHHHHH
Confidence 112377777777776
No 312
>cd05092 PTKc_TrkA Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase A. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase A (TrkA); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkA is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkA to its ligand, nerve growth factor (NGF), results in receptor oligomerization and activation of the catalytic domain. TrkA is expressed mainly in neural-crest-derived sensory
Probab=99.72 E-value=3.7e-17 Score=152.02 Aligned_cols=110 Identities=21% Similarity=0.336 Sum_probs=90.1
Q ss_pred ccCCCCCcceeEEEEEEEe-----ecCcEEEEEEcCCCChhHHHHHHHHHHH----------------------------
Q psy6828 48 SSNPDSDFRYSAIFTPIGI-----YKGRIFAIKRIPKKSVDITRAMKKELKI---------------------------- 94 (392)
Q Consensus 48 ~~~~lg~G~~g~V~~~~~~-----~~~~~vAiK~~~~~~~~~~~~~~~E~~~---------------------------- 94 (392)
....+|+|+||.||++... .++..+|+|.+........+.+.+|+.+
T Consensus 9 ~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~ 88 (280)
T cd05092 9 LKWELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTVLQHQHIVRFYGVCTEGRPLLMVFEY 88 (280)
T ss_pred eccccCCccCCeEEEeEEecCCCCCCceEEEEEecCcCCHHHHHHHHHHHHHHhcCCCCCCceEEEEEecCCceEEEEec
Confidence 3668999999999999743 3467899999987666666778888777
Q ss_pred -------HHhhcCC--------------cCCCHHHHHHHHHHHHHHHHHHhcCCcccccCCCCCceEEcCCceEEEeccc
Q psy6828 95 -------DIMENED--------------VKLDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLVDSRWVVKLADFG 153 (392)
Q Consensus 95 -------~~l~~~~--------------~~l~~~~~~~i~~qi~~~l~ylH~~~iiiHrDlKp~NIll~~~~~~kl~DFG 153 (392)
+++.... ..+++..+..++.|++.|+.|||++++ +||||||+|||+++++.+||+|||
T Consensus 89 ~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~~LH~~~i-~H~dlkp~nil~~~~~~~kL~dfg 167 (280)
T cd05092 89 MRHGDLNRFLRSHGPDAKILAGGEDVAPGQLTLGQMLAIASQIASGMVYLASLHF-VHRDLATRNCLVGQGLVVKIGDFG 167 (280)
T ss_pred CCCCCHHHHHHhcCcchhhhcccccCCccccCHHHHHHHHHHHHHHHHHHHHCCe-ecccccHhhEEEcCCCCEEECCCC
Confidence 2222211 247889999999999999999999999 999999999999999999999999
Q ss_pred cchhc
Q psy6828 154 LTEFK 158 (392)
Q Consensus 154 la~~~ 158 (392)
+++..
T Consensus 168 ~~~~~ 172 (280)
T cd05092 168 MSRDI 172 (280)
T ss_pred ceeEc
Confidence 98643
No 313
>cd06632 STKc_MEKK1_plant Catalytic domain of the Protein Serine/Threonine Kinase, Plant MAP/ERK kinase kinase 1. Serine/threonine kinases (STKs), plant MAP/ERK kinase kinase 1 (MEKK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The plant MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of plant mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) including Arabidopsis thaliana MEKK1 and MAPKKK3. MEKK1 is a MAPKKK that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Arabidops
Probab=99.72 E-value=2e-17 Score=151.29 Aligned_cols=110 Identities=25% Similarity=0.442 Sum_probs=91.0
Q ss_pred eccCCCCCcceeEEEEEEEeecCcEEEEEEcCCCC-----hhHHHHHHHHHHH---------------------------
Q psy6828 47 LSSNPDSDFRYSAIFTPIGIYKGRIFAIKRIPKKS-----VDITRAMKKELKI--------------------------- 94 (392)
Q Consensus 47 ~~~~~lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~-----~~~~~~~~~E~~~--------------------------- 94 (392)
...+.+|+|+||+||+|.+..+++.|++|.+.... ....+.+.+|+..
T Consensus 3 ~~~~~ig~g~~~~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv~e 82 (258)
T cd06632 3 RKGELLGSGSFGSVYEGLNLDDGDFFAVKEVSLADDGQTGQEAVKQLEQEIALLSKLQHPNIVQYLGTEREEDNLYIFLE 82 (258)
T ss_pred cccceeeecCCceEEEEEEcCCCcEEEEEEEEEccccccchHHHHHHHHHHHHHHhcCCCCchheeeeEecCCeEEEEEE
Confidence 34567999999999999988899999999986543 1244567777665
Q ss_pred --------HHhhcCCcCCCHHHHHHHHHHHHHHHHHHhcCCcccccCCCCCceEEcCCceEEEeccccchhc
Q psy6828 95 --------DIMENEDVKLDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLVDSRWVVKLADFGLTEFK 158 (392)
Q Consensus 95 --------~~l~~~~~~l~~~~~~~i~~qi~~~l~ylH~~~iiiHrDlKp~NIll~~~~~~kl~DFGla~~~ 158 (392)
+++.+. ..+++..+..++.|++.||.|||+.++ +|+||||+||+++.++.+||+|||++...
T Consensus 83 ~~~~~~L~~~~~~~-~~~~~~~~~~~~~~i~~~l~~lH~~~i-~H~dl~~~ni~~~~~~~~kl~d~~~~~~~ 152 (258)
T cd06632 83 LVPGGSLAKLLKKY-GSFPEPVIRLYTRQILLGLEYLHDRNT-VHRDIKGANILVDTNGVVKLADFGMAKQV 152 (258)
T ss_pred ecCCCcHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHCCc-ccCCCCHHHEEECCCCCEEEccCccceec
Confidence 333322 258899999999999999999999999 99999999999999999999999988754
No 314
>cd07880 STKc_p38gamma_MAPK12 Catalytic domain of the Serine/Threonine Kinase, p38gamma Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38gamma subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38gamma subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38gamma, also called MAPK12
Probab=99.71 E-value=1.7e-17 Score=159.07 Aligned_cols=131 Identities=23% Similarity=0.297 Sum_probs=103.1
Q ss_pred eeeeccCCCCCcceeEEEEEEEeecCcEEEEEEcCCCCh--hHHHHHHHHHHH-------------H-------------
Q psy6828 44 QVSLSSNPDSDFRYSAIFTPIGIYKGRIFAIKRIPKKSV--DITRAMKKELKI-------------D------------- 95 (392)
Q Consensus 44 ~~~~~~~~lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~~--~~~~~~~~E~~~-------------~------------- 95 (392)
..|...+.||+|+||.||++.+..+++.||||.+.+... ...+.+.+|+.+ +
T Consensus 15 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~ 94 (343)
T cd07880 15 DRYRDLKQVGSGAYGTVCSALDRRTGAKVAIKKLYRPFQSELFAKRAYRELRLLKHMKHENVIGLLDVFTPDLSLDRFHD 94 (343)
T ss_pred cceEEEEEeeecCCeEEEEEEECCCCcEEEEEEecccccchHHHHHHHHHHHHHHhcCCCCccceeeeecCCccccccce
Confidence 346667889999999999999999999999999865322 223456666665 0
Q ss_pred --------------HhhcCCcCCCHHHHHHHHHHHHHHHHHHhcCCcccccCCCCCceEEcCCceEEEeccccchhcccc
Q psy6828 96 --------------IMENEDVKLDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLVDSRWVVKLADFGLTEFKRDA 161 (392)
Q Consensus 96 --------------~l~~~~~~l~~~~~~~i~~qi~~~l~ylH~~~iiiHrDlKp~NIll~~~~~~kl~DFGla~~~~~~ 161 (392)
++. ...+++..+..++.|++.||.|||+.++ +||||||+||+++.++.+|++|||++......
T Consensus 95 ~~lv~e~~~~~l~~~~~--~~~l~~~~~~~i~~qi~~al~~LH~~gi-~H~dlkp~Nill~~~~~~kl~dfg~~~~~~~~ 171 (343)
T cd07880 95 FYLVMPFMGTDLGKLMK--HEKLSEDRIQFLVYQMLKGLKYIHAAGI-IHRDLKPGNLAVNEDCELKILDFGLARQTDSE 171 (343)
T ss_pred EEEEEecCCCCHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHhCCe-ecCCCCHHHEEEcCCCCEEEeecccccccccC
Confidence 111 1258899999999999999999999999 99999999999999999999999998754221
Q ss_pred c---------------------cccccccceeeeeee
Q psy6828 162 E---------------------YTGTDQHSFLQHTYH 177 (392)
Q Consensus 162 ~---------------------~~~~d~~s~g~~~~~ 177 (392)
. ....|+||+|+++|+
T Consensus 172 ~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~ll~~ 208 (343)
T cd07880 172 MTGYVVTRWYRAPEVILNWMHYTQTVDIWSVGCIMAE 208 (343)
T ss_pred ccccccCCcccCHHHHhCCCCCCcHHHHHHHHHHHHH
Confidence 1 112488888888887
No 315
>cd05094 PTKc_TrkC Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase C. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase C (TrkC); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkC is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkC to its ligand, neurotrophin 3 (NT3), results in receptor oligomerization and activation of the catalytic domain. TrkC is broadly expressed in the nervous system and in some n
Probab=99.71 E-value=5.3e-17 Score=151.83 Aligned_cols=112 Identities=19% Similarity=0.366 Sum_probs=91.7
Q ss_pred eeccCCCCCcceeEEEEEEEee-----cCcEEEEEEcCCCChhHHHHHHHHHHH--------------------------
Q psy6828 46 SLSSNPDSDFRYSAIFTPIGIY-----KGRIFAIKRIPKKSVDITRAMKKELKI-------------------------- 94 (392)
Q Consensus 46 ~~~~~~lg~G~~g~V~~~~~~~-----~~~~vAiK~~~~~~~~~~~~~~~E~~~-------------------------- 94 (392)
+...+.||+|+||.||++.+.. ++..+++|.+........+.+.+|+.+
T Consensus 7 ~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~ 86 (291)
T cd05094 7 IVLKRELGEGAFGKVFLAECYNLSPTKDKMLVAVKALKDPTLAARKDFQREAELLTNLQHEHIVKFYGVCGDGDPLIMVF 86 (291)
T ss_pred eEEeeeecccCCCeEEEeEeeccCCCCcceeeEEEecCCccHHHHHHHHHHHHHHhcCCCCCcceEEEEEccCCceEEEE
Confidence 3445789999999999998543 456799999987766666778888776
Q ss_pred ---------HHhhcC---------------CcCCCHHHHHHHHHHHHHHHHHHhcCCcccccCCCCCceEEcCCceEEEe
Q psy6828 95 ---------DIMENE---------------DVKLDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLVDSRWVVKLA 150 (392)
Q Consensus 95 ---------~~l~~~---------------~~~l~~~~~~~i~~qi~~~l~ylH~~~iiiHrDlKp~NIll~~~~~~kl~ 150 (392)
+++... ...+++..+..++.|++.||.|||++++ +||||||+||+++.++.+||+
T Consensus 87 e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~~~i-~H~dlkp~Nil~~~~~~~~l~ 165 (291)
T cd05094 87 EYMKHGDLNKFLRAHGPDAMILVDGQPRQAKGELGLSQMLHIASQIASGMVYLASQHF-VHRDLATRNCLVGANLLVKIG 165 (291)
T ss_pred ecCCCCcHHHHHHhcCcccccccccccccCcCCCCHHHHHHHHHHHHHHHHHHHhCCe-eecccCcceEEEccCCcEEEC
Confidence 333221 1247889999999999999999999999 999999999999999999999
Q ss_pred ccccchhc
Q psy6828 151 DFGLTEFK 158 (392)
Q Consensus 151 DFGla~~~ 158 (392)
|||+++..
T Consensus 166 dfg~a~~~ 173 (291)
T cd05094 166 DFGMSRDV 173 (291)
T ss_pred CCCccccc
Confidence 99998654
No 316
>cd06640 STKc_MST4 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 4. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 4 (MST4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST4 is sometimes referred to as MASK (MST3 and SOK1-related kinase). It plays a role in mitogen-activated protein kinase (MAPK) signaling during cytoskeletal rearrangement, morphogenesis, and apoptosis. It influences cell growth and transformation by modulating the extracellular signal-regulated kinase (ERK) pathway. MST4 may also play a role in tumor formation and progression. It localizes in the Golgi apparatus by inter
Probab=99.71 E-value=2.2e-17 Score=153.26 Aligned_cols=111 Identities=27% Similarity=0.423 Sum_probs=93.1
Q ss_pred eeeccCCCCCcceeEEEEEEEeecCcEEEEEEcCCCCh-hHHHHHHHHHHH-----------------------------
Q psy6828 45 VSLSSNPDSDFRYSAIFTPIGIYKGRIFAIKRIPKKSV-DITRAMKKELKI----------------------------- 94 (392)
Q Consensus 45 ~~~~~~~lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~~-~~~~~~~~E~~~----------------------------- 94 (392)
.|...+.+|+|+||.||.+.+..+++.||+|.+..... ...+.+.+|+.+
T Consensus 5 ~y~~~~~lg~g~~~~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~ 84 (277)
T cd06640 5 LFTKLERIGKGSFGEVFKGIDNRTQQVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYYGSYLKGTKLWIIMEYL 84 (277)
T ss_pred hhhhhhhcccCCCeEEEEEEEccCCEEEEEEEEeccccHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECCEEEEEEecC
Confidence 34556789999999999999999999999999875532 345567777765
Q ss_pred ------HHhhcCCcCCCHHHHHHHHHHHHHHHHHHhcCCcccccCCCCCceEEcCCceEEEeccccchhc
Q psy6828 95 ------DIMENEDVKLDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLVDSRWVVKLADFGLTEFK 158 (392)
Q Consensus 95 ------~~l~~~~~~l~~~~~~~i~~qi~~~l~ylH~~~iiiHrDlKp~NIll~~~~~~kl~DFGla~~~ 158 (392)
+++.. .++++.++..++.|++.||.|||+.++ +|+||+|+||+++.++.++++|||++...
T Consensus 85 ~~~~L~~~i~~--~~l~~~~~~~~~~~l~~~l~~lh~~~i-vH~dl~p~Nil~~~~~~~~l~dfg~~~~~ 151 (277)
T cd06640 85 GGGSALDLLRA--GPFDEFQIATMLKEILKGLDYLHSEKK-IHRDIKAANVLLSEQGDVKLADFGVAGQL 151 (277)
T ss_pred CCCcHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHhCCc-cCcCCChhhEEEcCCCCEEEcccccceec
Confidence 33332 258899999999999999999999999 99999999999999999999999998654
No 317
>cd07879 STKc_p38delta_MAPK13 Catalytic domain of the Serine/Threonine Kinase, p38delta Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38delta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38delta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38delta, also called MAPK13
Probab=99.71 E-value=1.4e-17 Score=159.62 Aligned_cols=133 Identities=23% Similarity=0.272 Sum_probs=101.3
Q ss_pred eeeeccCCCCCcceeEEEEEEEeecCcEEEEEEcCCCCh--hHHHHHHHHHHH-------------H-------------
Q psy6828 44 QVSLSSNPDSDFRYSAIFTPIGIYKGRIFAIKRIPKKSV--DITRAMKKELKI-------------D------------- 95 (392)
Q Consensus 44 ~~~~~~~~lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~~--~~~~~~~~E~~~-------------~------------- 95 (392)
..|.....||+|+||.||+|.+..+|+.||+|.+.+... .....+.+|+.+ +
T Consensus 15 ~~y~~~~~ig~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~~~ 94 (342)
T cd07879 15 ERYTSLKQVGSGAYGSVCSAIDKRTGEKVAIKKLSRPFQSEIFAKRAYRELTLLKHMQHENVIGLLDVFTSAVSGDEFQD 94 (342)
T ss_pred cceEEEEEeeecCCeEEEEEEeCCCCcEEEEEEecCccccccchhHHHHHHHHHHhcCCCCccchhheecccccCCCCce
Confidence 345556789999999999999999999999999875422 122345556555 0
Q ss_pred ------Hh-----hcCCcCCCHHHHHHHHHHHHHHHHHHhcCCcccccCCCCCceEEcCCceEEEeccccchhcccc---
Q psy6828 96 ------IM-----ENEDVKLDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLVDSRWVVKLADFGLTEFKRDA--- 161 (392)
Q Consensus 96 ------~l-----~~~~~~l~~~~~~~i~~qi~~~l~ylH~~~iiiHrDlKp~NIll~~~~~~kl~DFGla~~~~~~--- 161 (392)
++ ......+++..+..++.|++.||.|||++++ +||||||+||+++.++.+||+|||+++.....
T Consensus 95 ~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~qi~~aL~~LH~~~i-~H~dlkp~NIll~~~~~~kL~dfg~~~~~~~~~~~ 173 (342)
T cd07879 95 FYLVMPYMQTDLQKIMGHPLSEDKVQYLVYQMLCGLKYIHSAGI-IHRDLKPGNLAVNEDCELKILDFGLARHADAEMTG 173 (342)
T ss_pred EEEEecccccCHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCc-ccCCCCHHHEEECCCCCEEEeeCCCCcCCCCCCCC
Confidence 00 0011258889999999999999999999999 99999999999999999999999998643211
Q ss_pred ------------------ccccccccceeeeeee
Q psy6828 162 ------------------EYTGTDQHSFLQHTYH 177 (392)
Q Consensus 162 ------------------~~~~~d~~s~g~~~~~ 177 (392)
.....|+||+|+++|+
T Consensus 174 ~~~~~~y~aPE~~~~~~~~~~~~Dv~slGvil~e 207 (342)
T cd07879 174 YVVTRWYRAPEVILNWMHYNQTVDIWSVGCIMAE 207 (342)
T ss_pred ceeeecccChhhhcCccccCchHHHHHHHHHHHH
Confidence 0112488888888887
No 318
>cd05613 STKc_MSK1_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 1. Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK1, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph
Probab=99.71 E-value=1.6e-17 Score=155.06 Aligned_cols=110 Identities=20% Similarity=0.292 Sum_probs=88.2
Q ss_pred ccCCCCCcceeEEEEEEEe---ecCcEEEEEEcCCCCh----hHHHHHHHHHHH--------------------------
Q psy6828 48 SSNPDSDFRYSAIFTPIGI---YKGRIFAIKRIPKKSV----DITRAMKKELKI-------------------------- 94 (392)
Q Consensus 48 ~~~~lg~G~~g~V~~~~~~---~~~~~vAiK~~~~~~~----~~~~~~~~E~~~-------------------------- 94 (392)
..+.+|+|+||.||.+.+. .+|+.||+|.+..... ...+.+.+|+.+
T Consensus 4 ~~~~lg~G~~g~v~~~~~~~~~~~g~~~aiK~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~~~~lv 83 (290)
T cd05613 4 LLKVLGTGAYGKVFLVRKVSGHDSGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHIRQSPFLVTLHYAFQTDTKLHLI 83 (290)
T ss_pred eeeeeccCCcceEEEEEeccCCCCCceEEEEEeehhhhhhcchHHHHHHHHHHHHHhcccCCChhceeeEeecCCeEEEE
Confidence 3567999999999999864 4789999999975332 233455666555
Q ss_pred ----------HHhhcCCcCCCHHHHHHHHHHHHHHHHHHhcCCcccccCCCCCceEEcCCceEEEeccccchhcc
Q psy6828 95 ----------DIMENEDVKLDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLVDSRWVVKLADFGLTEFKR 159 (392)
Q Consensus 95 ----------~~l~~~~~~l~~~~~~~i~~qi~~~l~ylH~~~iiiHrDlKp~NIll~~~~~~kl~DFGla~~~~ 159 (392)
+++... ..+++..+..++.|++.||.|||+.++ +||||||+|||++.++.+||+|||+++...
T Consensus 84 ~e~~~~~~L~~~l~~~-~~l~~~~~~~~~~qi~~al~~lH~~~i-~H~dl~p~nil~~~~~~~kl~dfg~~~~~~ 156 (290)
T cd05613 84 LDYINGGELFTHLSQR-ERFKEQEVQIYSGEIVLALEHLHKLGI-IYRDIKLENILLDSNGHVVLTDFGLSKEFH 156 (290)
T ss_pred EecCCCCcHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHhCCe-eccCCCHHHeEECCCCCEEEeeCccceecc
Confidence 222222 258899999999999999999999999 999999999999999999999999987643
No 319
>cd05074 PTKc_Tyro3 Catalytic domain of the Protein Tyrosine Kinase, Tyro3. Protein Tyrosine Kinase (PTK) family; Tyro3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyro3 (or Sky) is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Tyro3 is predominantly expressed in the central nervous system and the brain, and functions as a neurotrophic fac
Probab=99.71 E-value=3e-17 Score=151.69 Aligned_cols=110 Identities=21% Similarity=0.266 Sum_probs=87.3
Q ss_pred ccCCCCCcceeEEEEEEEee---cCcEEEEEEcCCCCh--hHHHHHHHHHHH-------------H--------------
Q psy6828 48 SSNPDSDFRYSAIFTPIGIY---KGRIFAIKRIPKKSV--DITRAMKKELKI-------------D-------------- 95 (392)
Q Consensus 48 ~~~~lg~G~~g~V~~~~~~~---~~~~vAiK~~~~~~~--~~~~~~~~E~~~-------------~-------------- 95 (392)
..+.||+|+||.||++.... +++.||||.+..... ...+.+.+|+.+ +
T Consensus 3 ~~~~ig~g~~g~v~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~~~~ 82 (273)
T cd05074 3 LGRMLGKGEFGSVREAQLKSEDGSFQKVAVKMLKADIFSSSDIEEFLREAACMKEFDHPNVIKLIGVSLRSRAKGRLPIP 82 (273)
T ss_pred chhcccCCCCCCEEeeEeeccCCCceEEEEEEeccccCChHHHHHHHHHHHHHhcCCCCCcceEEEEEccCCCCCcccce
Confidence 34679999999999998654 578999999975432 345567777776 0
Q ss_pred -----Hhhc--------------CCcCCCHHHHHHHHHHHHHHHHHHhcCCcccccCCCCCceEEcCCceEEEeccccch
Q psy6828 96 -----IMEN--------------EDVKLDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLVDSRWVVKLADFGLTE 156 (392)
Q Consensus 96 -----~l~~--------------~~~~l~~~~~~~i~~qi~~~l~ylH~~~iiiHrDlKp~NIll~~~~~~kl~DFGla~ 156 (392)
+... ....+++..+..++.|++.||.|||++++ +||||||+||+++.++.+|++|||+++
T Consensus 83 ~~~~~~~~~~~l~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lH~~~i-~H~dikp~nili~~~~~~kl~dfg~~~ 161 (273)
T cd05074 83 MVILPFMKHGDLHTFLLMSRIGEEPFTLPLQTLVRFMIDIASGMEYLSSKNF-IHRDLAARNCMLNENMTVCVADFGLSK 161 (273)
T ss_pred EEEEecCCCCcHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCE-eecccchhhEEEcCCCCEEECcccccc
Confidence 1100 11136788899999999999999999999 999999999999999999999999987
Q ss_pred hc
Q psy6828 157 FK 158 (392)
Q Consensus 157 ~~ 158 (392)
..
T Consensus 162 ~~ 163 (273)
T cd05074 162 KI 163 (273)
T ss_pred cc
Confidence 54
No 320
>cd05097 PTKc_DDR_like Catalytic domain of Discoidin Domain Receptor-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR)-like proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR-like proteins are members of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linked to a variety of human cancers including
Probab=99.71 E-value=4.5e-17 Score=152.62 Aligned_cols=113 Identities=22% Similarity=0.322 Sum_probs=89.2
Q ss_pred eeeccCCCCCcceeEEEEEEEeecC--------------cEEEEEEcCCCC-hhHHHHHHHHHHH---------------
Q psy6828 45 VSLSSNPDSDFRYSAIFTPIGIYKG--------------RIFAIKRIPKKS-VDITRAMKKELKI--------------- 94 (392)
Q Consensus 45 ~~~~~~~lg~G~~g~V~~~~~~~~~--------------~~vAiK~~~~~~-~~~~~~~~~E~~~--------------- 94 (392)
.|...+.||+|+||.||++.+..++ ..||+|.++... ....+.+.+|+.+
T Consensus 6 ~~~~~~~lg~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~ei~~l~~l~h~~i~~~~~~ 85 (295)
T cd05097 6 QLRLKEKLGEGQFGEVHLCEAEGLAEFLGEGAPEFDGQPVLVAVKMLRADVTKTARNDFLKEIKIMSRLKNPNIIRLLGV 85 (295)
T ss_pred hCeehhccCCCCCceEEecccccchhhccccCcccCCCceEEEEEecCCCCCHHHHHHHHHHHHHHHhCCCCCcCeEEEE
Confidence 4555678999999999999875432 359999997653 2345568888777
Q ss_pred -----------HHhhc---------CC-----------cCCCHHHHHHHHHHHHHHHHHHhcCCcccccCCCCCceEEcC
Q psy6828 95 -----------DIMEN---------ED-----------VKLDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLVDS 143 (392)
Q Consensus 95 -----------~~l~~---------~~-----------~~l~~~~~~~i~~qi~~~l~ylH~~~iiiHrDlKp~NIll~~ 143 (392)
+++.. .. ..+++..+..++.|++.||.|||++++ +||||||+||++++
T Consensus 86 ~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~~~i-~H~dlkp~Nill~~ 164 (295)
T cd05097 86 CVSDDPLCMITEYMENGDLNQFLSQREIESTFTHANNIPSVSIANLLYMAVQIASGMKYLASLNF-VHRDLATRNCLVGN 164 (295)
T ss_pred EcCCCccEEEEecCCCCcHHHHHHhccccccccccccCCcccHHHHHHHHHHHHHHHHHHHhcCe-eccccChhhEEEcC
Confidence 22211 11 136788889999999999999999999 99999999999999
Q ss_pred CceEEEeccccchhc
Q psy6828 144 RWVVKLADFGLTEFK 158 (392)
Q Consensus 144 ~~~~kl~DFGla~~~ 158 (392)
++.+||+|||++...
T Consensus 165 ~~~~kl~dfg~~~~~ 179 (295)
T cd05097 165 HYTIKIADFGMSRNL 179 (295)
T ss_pred CCcEEeccccccccc
Confidence 999999999998754
No 321
>cd06605 PKc_MAPKK Catalytic domain of the dual-specificity Protein Kinase, Mitogen-Activated Protein Kinase Kinase. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK or MAP2K), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK or MAP3K). MAPKKs are dual-specificity
Probab=99.71 E-value=1.8e-17 Score=152.44 Aligned_cols=128 Identities=23% Similarity=0.345 Sum_probs=103.0
Q ss_pred cCCCCCcceeEEEEEEEeecCcEEEEEEcCCCCh-hHHHHHHHHHHH---------------------------------
Q psy6828 49 SNPDSDFRYSAIFTPIGIYKGRIFAIKRIPKKSV-DITRAMKKELKI--------------------------------- 94 (392)
Q Consensus 49 ~~~lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~~-~~~~~~~~E~~~--------------------------------- 94 (392)
.+.+|+|+||.||++.+..+++.||+|.+..... ...+.+.+|+.+
T Consensus 6 ~~~ig~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~e~~~~~~ 85 (265)
T cd06605 6 LGELGAGNSGVVSKVLHRPTGKIMAVKTIRLEINEAIQKQILRELDILHKCNSPYIVGFYGAFYNNGDISICMEYMDGGS 85 (265)
T ss_pred HHHhcCCCCeEEEEEEEcCCCcEEEEEEEecccChHHHHHHHHHHHHHHHCCCCchhhhheeeecCCEEEEEEEecCCCc
Confidence 4579999999999999999999999999876543 344567777665
Q ss_pred --HHhhcCCcCCCHHHHHHHHHHHHHHHHHHhc-CCcccccCCCCCceEEcCCceEEEeccccchhccccc---------
Q psy6828 95 --DIMENEDVKLDNMFIASLVADILRGMLYLHD-SALRYHGNLKASNCLVDSRWVVKLADFGLTEFKRDAE--------- 162 (392)
Q Consensus 95 --~~l~~~~~~l~~~~~~~i~~qi~~~l~ylH~-~~iiiHrDlKp~NIll~~~~~~kl~DFGla~~~~~~~--------- 162 (392)
+++......+++..+..++.|++.||.|||+ .++ +|+||||+||++++++.++|+|||++.......
T Consensus 86 L~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~~i-~H~dl~~~ni~~~~~~~~~l~d~g~~~~~~~~~~~~~~~~~~ 164 (265)
T cd06605 86 LDKILKEVQGRIPERILGKIAVAVLKGLTYLHEKHKI-IHRDVKPSNILVNSRGQIKLCDFGVSGQLVNSLAKTFVGTSS 164 (265)
T ss_pred HHHHHHHccCCCCHHHHHHHHHHHHHHHHHHcCCCCe-ecCCCCHHHEEECCCCCEEEeecccchhhHHHHhhcccCChh
Confidence 3333333478999999999999999999999 999 999999999999999999999999987542111
Q ss_pred ------------cccccccceeeeeee
Q psy6828 163 ------------YTGTDQHSFLQHTYH 177 (392)
Q Consensus 163 ------------~~~~d~~s~g~~~~~ 177 (392)
....|+||+|+++|+
T Consensus 165 y~~PE~~~~~~~~~~~Dv~slG~~l~~ 191 (265)
T cd06605 165 YMAPERIQGNDYSVKSDIWSLGLSLIE 191 (265)
T ss_pred ccCHHHHcCCCCCchhhHHHHHHHHHH
Confidence 112488888888877
No 322
>cd06648 STKc_PAK_II Catalytic domain of the Protein Serine/Threonine Kinase, Group II p21-activated kinase. Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group II, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. Group II PAKs, also called non-conventional PAKs, include PAK4, PAK5, and PAK6. Group II PAKs contain PBD (p21-binding domain) and catalytic domains, but lack other motifs foun
Probab=99.71 E-value=2.4e-17 Score=153.82 Aligned_cols=109 Identities=21% Similarity=0.315 Sum_probs=91.6
Q ss_pred eccCCCCCcceeEEEEEEEeecCcEEEEEEcCCCChhHHHHHHHHHHH--------------------------------
Q psy6828 47 LSSNPDSDFRYSAIFTPIGIYKGRIFAIKRIPKKSVDITRAMKKELKI-------------------------------- 94 (392)
Q Consensus 47 ~~~~~lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~~~~~~~~~~E~~~-------------------------------- 94 (392)
.....||+|++|.||++.+..+++.+++|.+........+.+.+|+.+
T Consensus 22 ~~~~~lg~g~~g~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~e~~~l~~~~h~~vv~~~~~~~~~~~~~~v~e~~~~~ 101 (285)
T cd06648 22 DNFVKIGEGSTGIVCIATDKSTGRQVAVKKMDLRKQQRRELLFNEVVIMRDYQHPNIVEMYSSYLVGDELWVVMEFLEGG 101 (285)
T ss_pred hcceEeccCCCeEEEEEEECCCCCEEEEEEEeccchhHHHHHHHHHHHHHHcCCCChheEEEEEEcCCeEEEEEeccCCC
Confidence 345679999999999999988999999999875544445567777665
Q ss_pred ---HHhhcCCcCCCHHHHHHHHHHHHHHHHHHhcCCcccccCCCCCceEEcCCceEEEeccccchhc
Q psy6828 95 ---DIMENEDVKLDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLVDSRWVVKLADFGLTEFK 158 (392)
Q Consensus 95 ---~~l~~~~~~l~~~~~~~i~~qi~~~l~ylH~~~iiiHrDlKp~NIll~~~~~~kl~DFGla~~~ 158 (392)
+++.. ..+++.++..++.|++.||.|||++++ +||||||+||+++.++.++++|||++...
T Consensus 102 ~L~~~~~~--~~~~~~~~~~~~~ql~~~l~~lH~~~i-~H~dl~p~Nil~~~~~~~~l~d~g~~~~~ 165 (285)
T cd06648 102 ALTDIVTH--TRMNEEQIATVCLAVLKALSFLHAQGV-IHRDIKSDSILLTSDGRVKLSDFGFCAQV 165 (285)
T ss_pred CHHHHHHh--CCCCHHHHHHHHHHHHHHHHHHHhCCe-ecCCCChhhEEEcCCCcEEEcccccchhh
Confidence 23322 258889999999999999999999999 99999999999999999999999987654
No 323
>cd05101 PTKc_FGFR2 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 2. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 2 (FGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR2 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=99.71 E-value=5e-17 Score=152.96 Aligned_cols=114 Identities=21% Similarity=0.283 Sum_probs=88.3
Q ss_pred eeeccCCCCCcceeEEEEEEEe-------ecCcEEEEEEcCCCC-hhHHHHHHHHHHH----------------------
Q psy6828 45 VSLSSNPDSDFRYSAIFTPIGI-------YKGRIFAIKRIPKKS-VDITRAMKKELKI---------------------- 94 (392)
Q Consensus 45 ~~~~~~~lg~G~~g~V~~~~~~-------~~~~~vAiK~~~~~~-~~~~~~~~~E~~~---------------------- 94 (392)
.+...+.||+|+||.||.+... .++..||+|.+.... ....+.+.+|+.+
T Consensus 16 ~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~i~~~~~~~~~~~~ 95 (304)
T cd05101 16 KLTLGKPLGEGCFGQVVMAEALGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGP 95 (304)
T ss_pred HeeecceeeccCCceEEEEEEeccCCCCCCcceeEEeeecccccchHHHHHHHHHHHHHHhhccCCCchheeEEEecCCc
Confidence 3455688999999999999753 234579999987542 2334556666555
Q ss_pred --------------HHhhcC---------------CcCCCHHHHHHHHHHHHHHHHHHhcCCcccccCCCCCceEEcCCc
Q psy6828 95 --------------DIMENE---------------DVKLDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLVDSRW 145 (392)
Q Consensus 95 --------------~~l~~~---------------~~~l~~~~~~~i~~qi~~~l~ylH~~~iiiHrDlKp~NIll~~~~ 145 (392)
+++... ...+++..+..++.|++.||.|||++++ +||||||+||+++.++
T Consensus 96 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~LH~~gi-vH~dlkp~Nili~~~~ 174 (304)
T cd05101 96 LYVIVEYASKGNLREYLRARRPPGMEYSYDIARVPDEQMTFKDLVSCTYQVARGMEYLASQKC-IHRDLAARNVLVTENN 174 (304)
T ss_pred eEEEEecCCCCcHHHHHHhcCCcccccccccccCCcccccHHHHHHHHHHHHHHHHHHHHCCe-eecccccceEEEcCCC
Confidence 233221 1247778889999999999999999999 9999999999999999
Q ss_pred eEEEeccccchhcc
Q psy6828 146 VVKLADFGLTEFKR 159 (392)
Q Consensus 146 ~~kl~DFGla~~~~ 159 (392)
.+||+|||+++...
T Consensus 175 ~~kl~D~g~~~~~~ 188 (304)
T cd05101 175 VMKIADFGLARDVN 188 (304)
T ss_pred cEEECCCccceecc
Confidence 99999999987553
No 324
>cd07866 STKc_BUR1 Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Bypass UAS Requirement 1 and similar proteins. Serine/Threonine Kinases (STKs), Bypass UAS Requirement 1 (BUR1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The BUR1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. BUR1, also called SGV1, is a yeast Cyclin-Dependent protein Kinase (CDK) that is functionally equivalent to mammalian CDK9. It associates with the cyclin BUR2. BUR genes were orginally identified in a genetic
Probab=99.71 E-value=1.5e-17 Score=156.66 Aligned_cols=113 Identities=29% Similarity=0.475 Sum_probs=89.6
Q ss_pred eeeccCCCCCcceeEEEEEEEeecCcEEEEEEcCCCChh--HHHHHHHHHHH-------------H--------------
Q psy6828 45 VSLSSNPDSDFRYSAIFTPIGIYKGRIFAIKRIPKKSVD--ITRAMKKELKI-------------D-------------- 95 (392)
Q Consensus 45 ~~~~~~~lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~~~--~~~~~~~E~~~-------------~-------------- 95 (392)
.|...+.||+|+||.||++.+..+++.||+|.+...... ....+.+|+.+ +
T Consensus 9 ~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~~~~ 88 (311)
T cd07866 9 DYEILGKLGEGTFGEVYKARQIKTGRVVALKKILMHNEKDGFPITALREIKILKKLKHPNVVPLIDMAVERPDKSKRKRG 88 (311)
T ss_pred cEEEEEEeccCCCEEEEEEEECCCCcEEEEEEEEeccCCCCcchhHHHHHHHHHhcCCCCccchhhheecccccccccCc
Confidence 355567799999999999999999999999988543221 11233444444 1
Q ss_pred ---------------HhhcCCcCCCHHHHHHHHHHHHHHHHHHhcCCcccccCCCCCceEEcCCceEEEeccccchhc
Q psy6828 96 ---------------IMENEDVKLDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLVDSRWVVKLADFGLTEFK 158 (392)
Q Consensus 96 ---------------~l~~~~~~l~~~~~~~i~~qi~~~l~ylH~~~iiiHrDlKp~NIll~~~~~~kl~DFGla~~~ 158 (392)
.+......+++..+..++.|+++||.|||++++ +||||||+||++++++.+||+|||+++..
T Consensus 89 ~~~lv~~~~~~~l~~~~~~~~~~~~~~~~~~i~~~l~~al~~lH~~~i-~H~dl~p~nil~~~~~~~~l~dfg~~~~~ 165 (311)
T cd07866 89 SVYMVTPYMDHDLSGLLENPSVKLTESQIKCYMLQLLEGINYLHENHI-LHRDIKAANILIDNQGILKIADFGLARPY 165 (311)
T ss_pred eEEEEEecCCcCHHHHHhccccCCCHHHHHHHHHHHHHHHHHHHhCCe-ecCCCCHHHEEECCCCCEEECcCccchhc
Confidence 111223368999999999999999999999999 99999999999999999999999998754
No 325
>cd06609 STKc_MST3_like Catalytic domain of Mammalian Ste20-like protein kinase 3-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST3, MST4, STK25, Schizosaccharomyces pombe Nak1 and Sid1, Saccharomyces cerevisiae sporulation-specific protein 1 (SPS1), and related proteins. Nak1 is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Sid1 is a component in the septation initiation network (SIN)
Probab=99.71 E-value=2.2e-17 Score=152.86 Aligned_cols=111 Identities=27% Similarity=0.423 Sum_probs=92.6
Q ss_pred eeccCCCCCcceeEEEEEEEeecCcEEEEEEcCCCC-hhHHHHHHHHHHH------------------------------
Q psy6828 46 SLSSNPDSDFRYSAIFTPIGIYKGRIFAIKRIPKKS-VDITRAMKKELKI------------------------------ 94 (392)
Q Consensus 46 ~~~~~~lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~-~~~~~~~~~E~~~------------------------------ 94 (392)
|...+.+|.|+||.||++.+..+++.||+|.+.... ......+.+|+.+
T Consensus 3 y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~~~ 82 (274)
T cd06609 3 FTLLECIGKGSFGEVYKAIDKRTNQVVAIKVIDLEEAEDEIEDIQQEIQFLSQCRSPYITKYYGSFLKGSKLWIIMEYCG 82 (274)
T ss_pred hhhhhhhcCCCCeEEEEEEECCCCeEEEEEEeeccccchHHHHHHHHHHHHHHcCCCCeeeeeEEEEECCeEEEEEEeeC
Confidence 334567999999999999999999999999987553 2344556777665
Q ss_pred -----HHhhcCCcCCCHHHHHHHHHHHHHHHHHHhcCCcccccCCCCCceEEcCCceEEEeccccchhcc
Q psy6828 95 -----DIMENEDVKLDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLVDSRWVVKLADFGLTEFKR 159 (392)
Q Consensus 95 -----~~l~~~~~~l~~~~~~~i~~qi~~~l~ylH~~~iiiHrDlKp~NIll~~~~~~kl~DFGla~~~~ 159 (392)
+++... .+++..+..++.|++.|+.|||++++ +|+||+|+||++++++.++|+|||+++...
T Consensus 83 ~~~L~~~~~~~--~~~~~~~~~~~~ql~~~l~~lh~~~i-~h~dl~p~ni~i~~~~~~~l~d~g~~~~~~ 149 (274)
T cd06609 83 GGSCLDLLKPG--KLDETYIAFILREVLLGLEYLHEEGK-IHRDIKAANILLSEEGDVKLADFGVSGQLT 149 (274)
T ss_pred CCcHHHHHhhc--CCCHHHHHHHHHHHHHHHHHHHhCCc-ccCCCCHHHEEECCCCCEEEcccccceeec
Confidence 222222 68999999999999999999999999 999999999999999999999999987654
No 326
>cd06642 STKc_STK25-YSK1 Catalytic domain of the Protein Serine/Threonine Kinase, STK25 or Yeast Sps1/Ste20-related kinase 1. Serine/threonine kinases (STKs), STK25 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK25 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. STK25 is also called Ste20/oxidant stress response kinase 1 (SOK1) or yeast Sps1/Ste20-related kinase 1 (YSK1). STK25 is localized in the Golgi apparatus through its interaction with the Golgi matrix protein GM130. It may play a role in the regulation of cell migration and polarization. STK25 binds and phosphorylates CCM3 (cerebral cavernous malformation 3), also called PCD10 (programmed cell death 10), and may play a role in apoptosis. Human STK25
Probab=99.71 E-value=1.5e-17 Score=154.24 Aligned_cols=112 Identities=25% Similarity=0.411 Sum_probs=91.5
Q ss_pred eccCCCCCcceeEEEEEEEeecCcEEEEEEcCCCCh-hHHHHHHHHHHH--------------------------HHhhc
Q psy6828 47 LSSNPDSDFRYSAIFTPIGIYKGRIFAIKRIPKKSV-DITRAMKKELKI--------------------------DIMEN 99 (392)
Q Consensus 47 ~~~~~lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~~-~~~~~~~~E~~~--------------------------~~l~~ 99 (392)
...+.||+|+||.||+|.+..+++.||+|.+..... ...+.+.+|+.+ +++..
T Consensus 7 ~~~~~l~~g~~~~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~ 86 (277)
T cd06642 7 TKLERIGKGSFGEVYKGIDNRTKEVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYITRYYGSYLKGTKLWIIMEYLGG 86 (277)
T ss_pred HHHHHhcCCCCeeEEEEEEcCCCeEEEEEEeccccchHHHHHHHHHHHHHHcCCCCccHhhhcccccCCceEEEEEccCC
Confidence 345669999999999999988999999999875432 344567777766 12211
Q ss_pred -------CCcCCCHHHHHHHHHHHHHHHHHHhcCCcccccCCCCCceEEcCCceEEEeccccchhcc
Q psy6828 100 -------EDVKLDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLVDSRWVVKLADFGLTEFKR 159 (392)
Q Consensus 100 -------~~~~l~~~~~~~i~~qi~~~l~ylH~~~iiiHrDlKp~NIll~~~~~~kl~DFGla~~~~ 159 (392)
....+++..+..++.|++.|+.|||++++ +|+||+|+||++++++.++++|||++....
T Consensus 87 ~~L~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i-vH~dl~p~ni~i~~~~~~~l~dfg~~~~~~ 152 (277)
T cd06642 87 GSALDLLKPGPLEETYIATILREILKGLDYLHSERK-IHRDIKAANVLLSEQGDVKLADFGVAGQLT 152 (277)
T ss_pred CcHHHHhhcCCCCHHHHHHHHHHHHHHHHHHhcCCe-eccCCChheEEEeCCCCEEEcccccccccc
Confidence 11258899999999999999999999999 999999999999999999999999987543
No 327
>PLN00009 cyclin-dependent kinase A; Provisional
Probab=99.71 E-value=3.1e-17 Score=153.47 Aligned_cols=112 Identities=24% Similarity=0.390 Sum_probs=88.3
Q ss_pred eeccCCCCCcceeEEEEEEEeecCcEEEEEEcCCCCh--hHHHHHHHHHHH--------------------------HH-
Q psy6828 46 SLSSNPDSDFRYSAIFTPIGIYKGRIFAIKRIPKKSV--DITRAMKKELKI--------------------------DI- 96 (392)
Q Consensus 46 ~~~~~~lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~~--~~~~~~~~E~~~--------------------------~~- 96 (392)
|...+.||+|++|.||++.+..+|+.||+|.+..... ...+.+.+|+.+ ++
T Consensus 4 y~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~ 83 (294)
T PLN00009 4 YEKVEKIGEGTYGVVYKARDRVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQHGNIVRLQDVVHSEKRLYLVFEYL 83 (294)
T ss_pred eEEEEEecCCCCEEEEEEEecCCCcEEEEEehhhccccccchHHHHHHHHHHHhccCCCEeeEEEEEecCCeEEEEEecc
Confidence 3445679999999999999999999999999865432 223456667665 12
Q ss_pred -------h-hcCCcCCCHHHHHHHHHHHHHHHHHHhcCCcccccCCCCCceEEcC-CceEEEeccccchhc
Q psy6828 97 -------M-ENEDVKLDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLVDS-RWVVKLADFGLTEFK 158 (392)
Q Consensus 97 -------l-~~~~~~l~~~~~~~i~~qi~~~l~ylH~~~iiiHrDlKp~NIll~~-~~~~kl~DFGla~~~ 158 (392)
+ ......+++..+..++.||+.||.|||++++ +||||||+||+++. ++.+||+|||++...
T Consensus 84 ~~~l~~~~~~~~~~~~~~~~~~~~~~qi~~aL~~LH~~~i-~H~dl~p~nill~~~~~~~kl~dfg~~~~~ 153 (294)
T PLN00009 84 DLDLKKHMDSSPDFAKNPRLIKTYLYQILRGIAYCHSHRV-LHRDLKPQNLLIDRRTNALKLADFGLARAF 153 (294)
T ss_pred cccHHHHHHhCCCCCcCHHHHHHHHHHHHHHHHHHHhCCe-eCCCCCcceEEEECCCCEEEEccccccccc
Confidence 1 1122246788889999999999999999999 99999999999985 467999999998753
No 328
>cd05090 PTKc_Ror1 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 1. Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 1 (Ror1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly
Probab=99.71 E-value=5.4e-17 Score=151.04 Aligned_cols=109 Identities=20% Similarity=0.278 Sum_probs=87.3
Q ss_pred cCCCCCcceeEEEEEEEe----ecCcEEEEEEcCCCCh-hHHHHHHHHHHH-----------------------------
Q psy6828 49 SNPDSDFRYSAIFTPIGI----YKGRIFAIKRIPKKSV-DITRAMKKELKI----------------------------- 94 (392)
Q Consensus 49 ~~~lg~G~~g~V~~~~~~----~~~~~vAiK~~~~~~~-~~~~~~~~E~~~----------------------------- 94 (392)
.+.||+|+||.||+|... .+++.||+|.+..... .....+.+|+.+
T Consensus 10 ~~~lg~g~~g~vy~~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~ 89 (283)
T cd05090 10 MEELGECAFGKIYKGHLYLPGMDHAQLVAIKTLKDINNPQQWGEFQQEASLMAELHHPNIVCLLGVVTQEQPVCMLFEYL 89 (283)
T ss_pred eeeccccCCcceEEEEEecCCCCCcceEEEEeccCCCCHHHHHHHHHHHHHHhhCCCCCeeeEEEEEecCCceEEEEEcC
Confidence 467999999999999853 3557899999975433 334567777766
Q ss_pred ------HHhhcC----------------CcCCCHHHHHHHHHHHHHHHHHHhcCCcccccCCCCCceEEcCCceEEEecc
Q psy6828 95 ------DIMENE----------------DVKLDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLVDSRWVVKLADF 152 (392)
Q Consensus 95 ------~~l~~~----------------~~~l~~~~~~~i~~qi~~~l~ylH~~~iiiHrDlKp~NIll~~~~~~kl~DF 152 (392)
+++... ...+++.++..++.|++.||.|||++++ +||||||+|||++.++.+||+||
T Consensus 90 ~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~~~i-~H~dlkp~nili~~~~~~kl~df 168 (283)
T cd05090 90 NQGDLHEFLIMRSPHSDVGCSSDEDGTVKSSLDHGDFLHIAIQIAAGMEYLSSHFF-VHKDLAARNILIGEQLHVKISDL 168 (283)
T ss_pred CCCcHHHHHHhcCCCCccccccccccccccccCHHHHHHHHHHHHHHHHHHHhcCe-ehhccccceEEEcCCCcEEeccc
Confidence 222110 1247888899999999999999999999 99999999999999999999999
Q ss_pred ccchhc
Q psy6828 153 GLTEFK 158 (392)
Q Consensus 153 Gla~~~ 158 (392)
|+++..
T Consensus 169 g~~~~~ 174 (283)
T cd05090 169 GLSREI 174 (283)
T ss_pred cccccc
Confidence 999754
No 329
>cd06627 STKc_Cdc7_like Catalytic domain of Cell division control protein 7-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), (Cdc7)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Cdc7-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include Schizosaccharomyces pombe Cdc7, Saccharomyces cerevisiae Cdc15, Arabidopsis thaliana mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) epsilon, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Fission yeast
Probab=99.71 E-value=3.2e-17 Score=149.46 Aligned_cols=111 Identities=25% Similarity=0.458 Sum_probs=94.3
Q ss_pred ccCCCCCcceeEEEEEEEeecCcEEEEEEcCCCCh--hHHHHHHHHHHH-------------------------------
Q psy6828 48 SSNPDSDFRYSAIFTPIGIYKGRIFAIKRIPKKSV--DITRAMKKELKI------------------------------- 94 (392)
Q Consensus 48 ~~~~lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~~--~~~~~~~~E~~~------------------------------- 94 (392)
....+|+|++|.||++.+..+++.|++|.+..... ...+.+.+|+++
T Consensus 4 ~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~~~~ 83 (254)
T cd06627 4 LGDLIGRGAFGVVYKGLNLETGDFVAIKQISLEKIKEEALKSIMQEIDLLKNLKHPNIVKYIGSIETSDSLYIILEYAEN 83 (254)
T ss_pred eeeEEcccCCeEEEEEEEcCCCcEEEEEEecccccCHHHHHHHHHHHHHHHhCCCCCccEEEEEEEeCCEEEEEEecCCC
Confidence 35679999999999999998999999999987655 455667777776
Q ss_pred ----HHhhcCCcCCCHHHHHHHHHHHHHHHHHHhcCCcccccCCCCCceEEcCCceEEEeccccchhccc
Q psy6828 95 ----DIMENEDVKLDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLVDSRWVVKLADFGLTEFKRD 160 (392)
Q Consensus 95 ----~~l~~~~~~l~~~~~~~i~~qi~~~l~ylH~~~iiiHrDlKp~NIll~~~~~~kl~DFGla~~~~~ 160 (392)
+++... ..+++..+..++.|++.||.|||++++ +||||||+||+++.++.++|+|||++.....
T Consensus 84 ~~L~~~~~~~-~~l~~~~~~~~~~~i~~~l~~lH~~~i-~H~dl~p~ni~i~~~~~~~l~d~~~~~~~~~ 151 (254)
T cd06627 84 GSLRQIIKKF-GPFPESLVAVYVYQVLQGLAYLHEQGV-IHRDIKAANILTTKDGVVKLADFGVATKLND 151 (254)
T ss_pred CcHHHHHHhc-cCCCHHHHHHHHHHHHHHHHHHhhCCc-ccCCCCHHHEEECCCCCEEEeccccceecCC
Confidence 223222 368999999999999999999999999 9999999999999999999999999886543
No 330
>cd06625 STKc_MEKK3_like Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades t
Probab=99.71 E-value=6.5e-17 Score=148.55 Aligned_cols=111 Identities=24% Similarity=0.346 Sum_probs=91.1
Q ss_pred eeccCCCCCcceeEEEEEEEeecCcEEEEEEcCCCCh-----hHHHHHHHHHHH--------------------------
Q psy6828 46 SLSSNPDSDFRYSAIFTPIGIYKGRIFAIKRIPKKSV-----DITRAMKKELKI-------------------------- 94 (392)
Q Consensus 46 ~~~~~~lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~~-----~~~~~~~~E~~~-------------------------- 94 (392)
+...+.+|+|+||.||.+.+..+++.||+|.+..... .....+.+|+.+
T Consensus 4 ~~~~~~lg~g~~~~vy~~~~~~~~~~~~lk~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~ 83 (263)
T cd06625 4 WRRGKLLGQGAFGRVYLCYDVDTGRELAVKQVPFDPDSPETKKEVNALECEIQLLKNLQHERIVQYYGCLRDDETLSIFM 83 (263)
T ss_pred ccccceecCCCceEEEEEEEcCCCcEEEEEEEeecccchhhHHHHHHHHHHHHHHHhCCCCCeeeeEEEEccCCeEEEEE
Confidence 3446789999999999999999999999999865432 233456777766
Q ss_pred ---------HHhhcCCcCCCHHHHHHHHHHHHHHHHHHhcCCcccccCCCCCceEEcCCceEEEeccccchhc
Q psy6828 95 ---------DIMENEDVKLDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLVDSRWVVKLADFGLTEFK 158 (392)
Q Consensus 95 ---------~~l~~~~~~l~~~~~~~i~~qi~~~l~ylH~~~iiiHrDlKp~NIll~~~~~~kl~DFGla~~~ 158 (392)
+++... ..+++..+..++.|++.||.|||+.++ +||||||+||++++++.++|+|||+++..
T Consensus 84 e~~~~~~l~~~~~~~-~~~~~~~~~~~~~~l~~~l~~lH~~~i-~H~dl~p~nilv~~~~~~~l~dfg~~~~~ 154 (263)
T cd06625 84 EYMPGGSVKDQLKAY-GALTETVTRKYTRQILEGVEYLHSNMI-VHRDIKGANILRDSAGNVKLGDFGASKRL 154 (263)
T ss_pred EECCCCcHHHHHHHh-CCCCHHHHHHHHHHHHHHHHHHHhCCe-ecCCCCHHHEEEcCCCCEEEeecccceec
Confidence 222222 257888999999999999999999999 99999999999999999999999998754
No 331
>KOG4645|consensus
Probab=99.71 E-value=1.6e-17 Score=172.11 Aligned_cols=113 Identities=22% Similarity=0.419 Sum_probs=91.0
Q ss_pred cCCCCCcceeEEEEEEEeecCcEEEEEEcCCCCh--hHHHHHHHHHHH--------------------------HHhhcC
Q psy6828 49 SNPDSDFRYSAIFTPIGIYKGRIFAIKRIPKKSV--DITRAMKKELKI--------------------------DIMENE 100 (392)
Q Consensus 49 ~~~lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~~--~~~~~~~~E~~~--------------------------~~l~~~ 100 (392)
...+|.|.||.||.|.+..+|+..|+|.+.-... .....+..|..+ +|++.+
T Consensus 1240 g~~Ig~G~fG~VYtavN~~tGellAvKEI~iq~~~~k~~~~i~eEm~vlE~lnHpNlV~YyGVEvHRekv~IFMEyC~~G 1319 (1509)
T KOG4645|consen 1240 GNFIGGGTFGKVYTAVNLDTGELLAVKEIKIQDSDHKTFKLIAEEMKVLEGLNHPNLVRYYGVEVHREKVYIFMEYCEGG 1319 (1509)
T ss_pred ccccCCcceeeeEEeecCCccchhhhhhhhcCccccccCcchHHHHHHHHhccCccccccCceeecHHHHHHHHHHhccC
Confidence 5679999999999999999999999998853321 222334445444 444443
Q ss_pred Cc--------CCCHHHHHHHHHHHHHHHHHHhcCCcccccCCCCCceEEcCCceEEEeccccchhccccc
Q psy6828 101 DV--------KLDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLVDSRWVVKLADFGLTEFKRDAE 162 (392)
Q Consensus 101 ~~--------~l~~~~~~~i~~qi~~~l~ylH~~~iiiHrDlKp~NIll~~~~~~kl~DFGla~~~~~~~ 162 (392)
.+ ..++.....+..|++.|+.|||++|| |||||||+||+|+.+|.+|++|||.|..+....
T Consensus 1320 sLa~ll~~gri~dE~vt~vyt~qll~gla~LH~~gI-VHRDIK~aNI~Ld~~g~iK~~DFGsa~ki~~~~ 1388 (1509)
T KOG4645|consen 1320 SLASLLEHGRIEDEMVTRVYTKQLLEGLAYLHEHGI-VHRDIKPANILLDFNGLIKYGDFGSAVKIKNNA 1388 (1509)
T ss_pred cHHHHHHhcchhhhhHHHHHHHHHHHHHHHHHhcCc-eecCCCccceeeecCCcEEeecccceeEecCch
Confidence 22 47777888999999999999999999 999999999999999999999999998776554
No 332
>cd05032 PTKc_InsR_like Catalytic domain of Insulin Receptor-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The InsR subfamily is composed of InsR, Insulin-like Growth Factor-1 Receptor (IGF-1R), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR and IGF-1R are receptor tyr kinases (RTKs) composed of two alphabeta heterodimers. Binding of the ligand (insulin, IGF-1, or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological
Probab=99.71 E-value=1.1e-16 Score=148.17 Aligned_cols=112 Identities=20% Similarity=0.237 Sum_probs=88.4
Q ss_pred eeccCCCCCcceeEEEEEEEeecC-----cEEEEEEcCCCCh-hHHHHHHHHHHH-------------------------
Q psy6828 46 SLSSNPDSDFRYSAIFTPIGIYKG-----RIFAIKRIPKKSV-DITRAMKKELKI------------------------- 94 (392)
Q Consensus 46 ~~~~~~lg~G~~g~V~~~~~~~~~-----~~vAiK~~~~~~~-~~~~~~~~E~~~------------------------- 94 (392)
+...+.+|+|+||.||++.....+ ..||+|.+..... .....+.+|+.+
T Consensus 8 ~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~~v 87 (277)
T cd05032 8 ITLIRELGQGSFGMVYEGLAKGVVKGEPETRVAIKTVNENASMRERIEFLNEASVMKEFNCHHVVRLLGVVSTGQPTLVV 87 (277)
T ss_pred eeEEeEecCCCCceEEEEEEeccCCCCcceeEEEEecCCccCHHHHHHHHHHHHHHHhCCCCceeEEEEEEcCCCCcEEE
Confidence 344567999999999999876543 7899999875532 334556677665
Q ss_pred ----------HHhhcC---------CcCCCHHHHHHHHHHHHHHHHHHhcCCcccccCCCCCceEEcCCceEEEeccccc
Q psy6828 95 ----------DIMENE---------DVKLDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLVDSRWVVKLADFGLT 155 (392)
Q Consensus 95 ----------~~l~~~---------~~~l~~~~~~~i~~qi~~~l~ylH~~~iiiHrDlKp~NIll~~~~~~kl~DFGla 155 (392)
+++... ...+++..+..++.|++.||.|||++++ +||||||+||+++.++.+||+|||++
T Consensus 88 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i-~H~di~p~nill~~~~~~kl~dfg~~ 166 (277)
T cd05032 88 MELMAKGDLKSYLRSRRPEAENNPGLGPPTLQKFIQMAAEIADGMAYLAAKKF-VHRDLAARNCMVAEDLTVKIGDFGMT 166 (277)
T ss_pred EecCCCCCHHHHHHhcccchhhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCc-cccccChheEEEcCCCCEEECCcccc
Confidence 222110 1136778899999999999999999999 99999999999999999999999998
Q ss_pred hhc
Q psy6828 156 EFK 158 (392)
Q Consensus 156 ~~~ 158 (392)
+..
T Consensus 167 ~~~ 169 (277)
T cd05032 167 RDI 169 (277)
T ss_pred hhh
Confidence 754
No 333
>cd07864 STKc_CDK12 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 12. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 12 (CDK12) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK12 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK12 is also called Cdc2-related protein kinase 7 (CRK7) or Cdc2-related kinase arginine/serine-rich (CrkRS). It is a unique CDK that contains an arginine/serine-rich (RS) domain, which is predominantly found in splicing factors. CDK12 is widely
Probab=99.71 E-value=2.4e-17 Score=154.76 Aligned_cols=112 Identities=24% Similarity=0.403 Sum_probs=89.3
Q ss_pred eeccCCCCCcceeEEEEEEEeecCcEEEEEEcCCCCh--hHHHHHHHHHHH-----------------------------
Q psy6828 46 SLSSNPDSDFRYSAIFTPIGIYKGRIFAIKRIPKKSV--DITRAMKKELKI----------------------------- 94 (392)
Q Consensus 46 ~~~~~~lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~~--~~~~~~~~E~~~----------------------------- 94 (392)
|...+.+|+|+||.||+|.+..+++.||+|.++.... .....+.+|+.+
T Consensus 9 ~~~~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~e~~~~~~l~h~~i~~~~~~~~~~~~~~~~~~~~ 88 (302)
T cd07864 9 FDIIGQIGEGTYGQVYKARDKDTGELVALKKVRLDNEKEGFPITAIREIKILRQLNHRNIVNLKEIVTDKQDALDFKKDK 88 (302)
T ss_pred hheeeeecccCCEEEEEEEECCCCcEEEEEEEeecccccCchHHHHHHHHHHHhCCCCCeeeeeheecCcchhhhccccC
Confidence 4446679999999999999999999999999964321 122334455444
Q ss_pred ---------------HHhhcCCcCCCHHHHHHHHHHHHHHHHHHhcCCcccccCCCCCceEEcCCceEEEeccccchhc
Q psy6828 95 ---------------DIMENEDVKLDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLVDSRWVVKLADFGLTEFK 158 (392)
Q Consensus 95 ---------------~~l~~~~~~l~~~~~~~i~~qi~~~l~ylH~~~iiiHrDlKp~NIll~~~~~~kl~DFGla~~~ 158 (392)
.++.+....+++.++..++.|++.||.|||+.++ +||||||+||++++++.+||+|||++...
T Consensus 89 ~~~~lv~e~~~~~l~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~i-~H~dl~p~nili~~~~~~kl~dfg~~~~~ 166 (302)
T cd07864 89 GAFYLVFEYMDHDLMGLLESGLVHFSEDHIKSFMKQLLEGLNYCHKKNF-LHRDIKCSNILLNNKGQIKLADFGLARLY 166 (302)
T ss_pred CcEEEEEcccCccHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCe-ecCCCCHHHEEECCCCcEEeCcccccccc
Confidence 1111122358999999999999999999999999 99999999999999999999999998754
No 334
>cd06647 STKc_PAK_I Catalytic domain of the Protein Serine/Threonine Kinase, Group I p21-activated kinase. Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group I, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAKs from higher eukaryotes are classified into two groups (I and II), according to their bi
Probab=99.71 E-value=2.7e-17 Score=154.06 Aligned_cols=114 Identities=20% Similarity=0.310 Sum_probs=92.8
Q ss_pred eeeeccCCCCCcceeEEEEEEEeecCcEEEEEEcCCCChhHHHHHHHHHHH--------------------------HHh
Q psy6828 44 QVSLSSNPDSDFRYSAIFTPIGIYKGRIFAIKRIPKKSVDITRAMKKELKI--------------------------DIM 97 (392)
Q Consensus 44 ~~~~~~~~lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~~~~~~~~~~E~~~--------------------------~~l 97 (392)
..|...+.+|+|+||.||++.+..+++.||+|.+........+.+.+|+.+ +++
T Consensus 19 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l~hp~i~~~~~~~~~~~~~~lv~e~~ 98 (293)
T cd06647 19 KKYTRFEKIGQGASGTVYTAIDVATGQEVAIKQMNLQQQPKKELIINEILVMRENKHPNIVNYLDSYLVGDELWVVMEYL 98 (293)
T ss_pred hhceeeeEecCCCCeEEEEEEEcCCCCEEEEEEeccccchHHHHHHHHHHHHhhcCCCCeeehhheeeeCCcEEEEEecC
Confidence 345556789999999999999888999999999875544445667777665 122
Q ss_pred hcC-------CcCCCHHHHHHHHHHHHHHHHHHhcCCcccccCCCCCceEEcCCceEEEeccccchhc
Q psy6828 98 ENE-------DVKLDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLVDSRWVVKLADFGLTEFK 158 (392)
Q Consensus 98 ~~~-------~~~l~~~~~~~i~~qi~~~l~ylH~~~iiiHrDlKp~NIll~~~~~~kl~DFGla~~~ 158 (392)
... ...+++.++..++.|++.||.|||++++ +||||||+||+++.++.+||+|||++...
T Consensus 99 ~~~~L~~~~~~~~l~~~~~~~i~~~l~~al~~LH~~gi-~H~dL~p~Nili~~~~~~kL~dfg~~~~~ 165 (293)
T cd06647 99 AGGSLTDVVTETCMDEGQIAAVCRECLQALEFLHSNQV-IHRDIKSDNILLGMDGSVKLTDFGFCAQI 165 (293)
T ss_pred CCCcHHHHHhhcCCCHHHHHHHHHHHHHHHHHHHhCCE-eeccCCHHHEEEcCCCCEEEccCcceecc
Confidence 111 1247888999999999999999999999 99999999999999999999999987644
No 335
>cd06633 STKc_TAO3 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 3. Serine/threonine kinases (STKs), thousand-and-one amino acids 3 (TAO3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO3 is also known as JIK (JNK inhibitory kinase) or KFC (kinase from chicken). It specifically activates c-Jun N-terminal kinase (JNK), presumably by phosphorylating and activating MKK4/MKK7. In Saccharomyces cerevisiae, TAO3 is a co
Probab=99.70 E-value=5.2e-17 Score=153.65 Aligned_cols=112 Identities=25% Similarity=0.390 Sum_probs=92.4
Q ss_pred eeeccCCCCCcceeEEEEEEEeecCcEEEEEEcCCCCh---hHHHHHHHHHHH---------------------------
Q psy6828 45 VSLSSNPDSDFRYSAIFTPIGIYKGRIFAIKRIPKKSV---DITRAMKKELKI--------------------------- 94 (392)
Q Consensus 45 ~~~~~~~lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~~---~~~~~~~~E~~~--------------------------- 94 (392)
++.....+|+|+||.||+|.+..+++.|++|.+..... .....+.+|+.+
T Consensus 22 ~~~~~~~lg~g~~g~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e 101 (313)
T cd06633 22 IFVGLHEIGHGSFGAVYFATNSHTNEVVAVKKMSYSGKQTNEKWQDIIKEVKFLQQLKHPNTIEYKGCYLKEHTAWLVME 101 (313)
T ss_pred HhhcceeeccCCCeEEEEEEECCCCcEEEEEEEeccccCchHHHHHHHHHHHHHHhCCCCCCccEEEEEEeCCEEEEEEe
Confidence 35556679999999999999999999999999875432 333456667666
Q ss_pred -------HHhhcCCcCCCHHHHHHHHHHHHHHHHHHhcCCcccccCCCCCceEEcCCceEEEeccccchh
Q psy6828 95 -------DIMENEDVKLDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLVDSRWVVKLADFGLTEF 157 (392)
Q Consensus 95 -------~~l~~~~~~l~~~~~~~i~~qi~~~l~ylH~~~iiiHrDlKp~NIll~~~~~~kl~DFGla~~ 157 (392)
+++......+++.++..++.|++.|+.|||++++ +|+||||+||+++.++.+||+|||++..
T Consensus 102 ~~~~~l~~~l~~~~~~l~~~~~~~~~~qi~~al~~LH~~gi-~H~dl~p~nili~~~~~~kL~dfg~~~~ 170 (313)
T cd06633 102 YCLGSASDLLEVHKKPLQEVEIAAITHGALQGLAYLHSHNM-IHRDIKAGNILLTEPGQVKLADFGSASK 170 (313)
T ss_pred cCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCe-ecCCCChhhEEECCCCCEEEeecCCCcc
Confidence 2333334468999999999999999999999999 9999999999999999999999998764
No 336
>KOG4278|consensus
Probab=99.70 E-value=1.7e-17 Score=160.27 Aligned_cols=161 Identities=22% Similarity=0.334 Sum_probs=121.4
Q ss_pred cCCCCCcceeEEEEEEEeecCcEEEEEEcCCCChhHHHHHHHHHHH----------------------------------
Q psy6828 49 SNPDSDFRYSAIFTPIGIYKGRIFAIKRIPKKSVDITRAMKKELKI---------------------------------- 94 (392)
Q Consensus 49 ~~~lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~~~~~~~~~~E~~~---------------------------------- 94 (392)
...||-|.||.||.|+++.-.-.||||.++...+. .++|+.|..+
T Consensus 272 khKLGGGQYGeVYeGvWKkyslTvAVKtLKEDtMe-veEFLkEAAvMKeikHpNLVqLLGVCT~EpPFYIiTEfM~yGNL 350 (1157)
T KOG4278|consen 272 KHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLVQLLGVCTHEPPFYIITEFMCYGNL 350 (1157)
T ss_pred eeccCCCcccceeeeeeeccceeeehhhhhhcchh-HHHHHHHHHHHHhhcCccHHHHhhhhccCCCeEEEEecccCccH
Confidence 67899999999999999998999999999766543 4556666655
Q ss_pred -HHhhcCCc-CCCHHHHHHHHHHHHHHHHHHhcCCcccccCCCCCceEEcCCceEEEeccccchhcccccccc-------
Q psy6828 95 -DIMENEDV-KLDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLVDSRWVVKLADFGLTEFKRDAEYTG------- 165 (392)
Q Consensus 95 -~~l~~~~~-~l~~~~~~~i~~qi~~~l~ylH~~~iiiHrDlKp~NIll~~~~~~kl~DFGla~~~~~~~~~~------- 165 (392)
+|++..+. .++.-..+.++.||.+|+.||..++. |||||...|+|+.++..+|++|||++++++.+.++.
T Consensus 351 LdYLRecnr~ev~avvLlyMAtQIsSaMeYLEkknF-IHRDLAARNCLVgEnhiVKvADFGLsRlMtgDTYTAHAGAKFP 429 (1157)
T KOG4278|consen 351 LDYLRECNRSEVPAVVLLYMATQISSAMEYLEKKNF-IHRDLAARNCLVGENHIVKVADFGLSRLMTGDTYTAHAGAKFP 429 (1157)
T ss_pred HHHHHHhchhhcchhHHHHHHHHHHHHHHHHHHhhh-hhhhhhhhhccccccceEEeeccchhhhhcCCceecccCccCc
Confidence 55555443 25666677889999999999999999 999999999999999999999999999998877642
Q ss_pred -----------------ccccceeeeeeeccCCCC--cccccccccchhhhc--------cCCHHHHHHhhcC
Q psy6828 166 -----------------TDQHSFLQHTYHVNRAGS--TESLHCKCDEALLFE--------MLPRSVAEQLRRG 211 (392)
Q Consensus 166 -----------------~d~~s~g~~~~~~~~~~~--~~~~d~~~~~~lL~~--------~lp~~v~~~l~~~ 211 (392)
.|+|+||+++||.-.|+. ...+|..+.-.+|.. -.|+.+.+.++..
T Consensus 430 IKWTAPEsLAyNtFSiKSDVWAFGVLLWEIATYGMsPYPGidlSqVY~LLEkgyRM~~PeGCPpkVYeLMraC 502 (1157)
T KOG4278|consen 430 IKWTAPESLAYNTFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYGLLEKGYRMDGPEGCPPKVYELMRAC 502 (1157)
T ss_pred ccccCcccccccccccchhhHHHHHHHHHHHhcCCCCCCCccHHHHHHHHhccccccCCCCCCHHHHHHHHHH
Confidence 299999999999333222 222333333333322 2366666666554
No 337
>cd07834 STKc_MAPK Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs serve as important mediators of cellular responses to extracellular signals. They control critical cellular functions including differentiation, proliferation, migration, and apoptosis. They are also implicated in the pathogenesis of many diseases including multiple types of cancer, stroke, diabetes, and chronic inflammation. Typical MAPK pathways involve a triple kinase core cascade comprising of the MAPK, which is phosphorylated and
Probab=99.70 E-value=2.8e-17 Score=156.48 Aligned_cols=113 Identities=28% Similarity=0.420 Sum_probs=92.0
Q ss_pred eeccCCCCCcceeEEEEEEEeecCcEEEEEEcCCCC--hhHHHHHHHHHHH-----------------------------
Q psy6828 46 SLSSNPDSDFRYSAIFTPIGIYKGRIFAIKRIPKKS--VDITRAMKKELKI----------------------------- 94 (392)
Q Consensus 46 ~~~~~~lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~--~~~~~~~~~E~~~----------------------------- 94 (392)
|...+.+|+|+||.||++.+..+++.||||.+.... ....+.+.+|+.+
T Consensus 2 y~i~~~ig~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~~~~l 81 (330)
T cd07834 2 YELLKPIGSGAYGVVCSAVDKRTGRKVAIKKISNVFDDLIDAKRILREIKLLRHLRHENIIGLLDILRPPSPEDFNDVYI 81 (330)
T ss_pred ceeeeeecCCCCeEEEEEEeCCCCcEEEEEeeccccccchhhhhHHHHHHHHHhcCCcchhhhhhhhcccCcccccceEE
Confidence 345678999999999999998889999999997643 2334456666554
Q ss_pred ----------HHhhcCCcCCCHHHHHHHHHHHHHHHHHHhcCCcccccCCCCCceEEcCCceEEEeccccchhccc
Q psy6828 95 ----------DIMENEDVKLDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLVDSRWVVKLADFGLTEFKRD 160 (392)
Q Consensus 95 ----------~~l~~~~~~l~~~~~~~i~~qi~~~l~ylH~~~iiiHrDlKp~NIll~~~~~~kl~DFGla~~~~~ 160 (392)
+++... ..+++..+..++.|++.||.|||++++ +||||||+||+++.++.++|+|||++.....
T Consensus 82 v~e~~~~~l~~~l~~~-~~l~~~~~~~i~~~l~~~l~~LH~~gi-~H~dlkp~nili~~~~~~~L~dfg~~~~~~~ 155 (330)
T cd07834 82 VTELMETDLHKVIKSP-QPLTDDHIQYFLYQILRGLKYLHSANV-IHRDLKPSNILVNSNCDLKICDFGLARGVDP 155 (330)
T ss_pred EecchhhhHHHHHhCC-CCCCHHHHHHHHHHHHHHHHHHHhCCe-ecCCCCHHHEEEcCCCCEEEcccCceEeecc
Confidence 122222 268899999999999999999999999 9999999999999999999999999886543
No 338
>cd05083 PTKc_Chk Catalytic domain of the Protein Tyrosine Kinase, Csk homologous kinase. Protein Tyrosine Kinase (PTK) family; Csk homologous kinase (Chk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. Chk is also referred to as megakaryocyte-associated tyrosine kinase (Matk). To inhibit Src kinases, Chk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Chk inhibit Src ki
Probab=99.70 E-value=3.1e-17 Score=150.14 Aligned_cols=107 Identities=24% Similarity=0.371 Sum_probs=87.7
Q ss_pred eeccCCCCCcceeEEEEEEEeecCcEEEEEEcCCCChhHHHHHHHHHHH-------------------------------
Q psy6828 46 SLSSNPDSDFRYSAIFTPIGIYKGRIFAIKRIPKKSVDITRAMKKELKI------------------------------- 94 (392)
Q Consensus 46 ~~~~~~lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~~~~~~~~~~E~~~------------------------------- 94 (392)
+...+.+|+|+||.||++. .+++.||+|.++... ..+.+.+|+.+
T Consensus 8 ~~~~~~lg~g~~g~v~~~~--~~~~~~~iK~~~~~~--~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~v~e~~~~~ 83 (254)
T cd05083 8 LTLGEIIGEGEFGAVLQGE--YTGQKVAVKNIKCDV--TAQAFLEETAVMTKLHHKNLVRLLGVILHNGLYIVMELMSKG 83 (254)
T ss_pred ceeeeeeccCCCCceEecc--cCCCceEEEeecCcc--hHHHHHHHHHHHHhCCCCCcCeEEEEEcCCCcEEEEECCCCC
Confidence 4556789999999999985 578899999986542 23456677666
Q ss_pred ---HHhhcC-CcCCCHHHHHHHHHHHHHHHHHHhcCCcccccCCCCCceEEcCCceEEEeccccchh
Q psy6828 95 ---DIMENE-DVKLDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLVDSRWVVKLADFGLTEF 157 (392)
Q Consensus 95 ---~~l~~~-~~~l~~~~~~~i~~qi~~~l~ylH~~~iiiHrDlKp~NIll~~~~~~kl~DFGla~~ 157 (392)
+++... ...+++..+..++.|++.||.|||+.++ +||||||+||+++.++.+||+|||++..
T Consensus 84 ~L~~~l~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~~-~H~dl~p~nili~~~~~~kl~Dfg~~~~ 149 (254)
T cd05083 84 NLVNFLRTRGRALVSVIQLLQFSLDVAEGMEYLESKKL-VHRDLAARNILVSEDGVAKVSDFGLARV 149 (254)
T ss_pred CHHHHHHhcCcCCCCHHHHHHHHHHHHHHHHHHHhCCe-eccccCcceEEEcCCCcEEECCCcccee
Confidence 333322 2257899999999999999999999999 9999999999999999999999998874
No 339
>cd05062 PTKc_IGF-1R Catalytic domain of the Protein Tyrosine Kinase, Insulin-like Growth Factor-1 Receptor. Protein Tyrosine Kinase (PTK) family; Insulin-like Growth Factor-1 Receptor (IGF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. IGF-1R is a receptor tyr kinases (RTK) that is composed of two alphabeta heterodimers. Binding of the ligand (IGF-1 or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, which stimulates downstream kinase activities and biological function. IGF-1R signaling is important in the differentiation, growth, and survival of normal cells. In cancer cells, wh
Probab=99.70 E-value=6.3e-17 Score=150.10 Aligned_cols=113 Identities=20% Similarity=0.301 Sum_probs=88.2
Q ss_pred eeeccCCCCCcceeEEEEEEEe-----ecCcEEEEEEcCCCC-hhHHHHHHHHHHH------------------------
Q psy6828 45 VSLSSNPDSDFRYSAIFTPIGI-----YKGRIFAIKRIPKKS-VDITRAMKKELKI------------------------ 94 (392)
Q Consensus 45 ~~~~~~~lg~G~~g~V~~~~~~-----~~~~~vAiK~~~~~~-~~~~~~~~~E~~~------------------------ 94 (392)
.+...+.+|+|+||.||.+.+. .++..||+|.+.... ......+.+|+.+
T Consensus 7 ~~~~~~~ig~G~~g~v~~~~~~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~e~~~l~~l~~~~iv~~~~~~~~~~~~~l 86 (277)
T cd05062 7 KITMSRELGQGSFGMVYEGIAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVRLLGVVSQGQPTLV 86 (277)
T ss_pred HceeeeeeccccCCeEEEEEeccCCCCCceeEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCeeeEEEEEcCCCCeEE
Confidence 3555678999999999999764 235689999986543 2344557777766
Q ss_pred -----------HHhhcC---------CcCCCHHHHHHHHHHHHHHHHHHhcCCcccccCCCCCceEEcCCceEEEecccc
Q psy6828 95 -----------DIMENE---------DVKLDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLVDSRWVVKLADFGL 154 (392)
Q Consensus 95 -----------~~l~~~---------~~~l~~~~~~~i~~qi~~~l~ylH~~~iiiHrDlKp~NIll~~~~~~kl~DFGl 154 (392)
+++... ...+++..+..++.|++.||.|||+.++ +||||||+||++++++.+||+|||+
T Consensus 87 v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~~-vH~dlkp~Nil~~~~~~~~l~dfg~ 165 (277)
T cd05062 87 IMELMTRGDLKSYLRSLRPEMENNPVQAPPSLKKMIQMAGEIADGMAYLNANKF-VHRDLAARNCMVAEDFTVKIGDFGM 165 (277)
T ss_pred EEecCCCCCHHHHHHHcCccccccccccCCCHHHHHHHHHHHHHHHHHHHHCCc-ccCCcchheEEEcCCCCEEECCCCC
Confidence 222221 1135677889999999999999999999 9999999999999999999999999
Q ss_pred chhc
Q psy6828 155 TEFK 158 (392)
Q Consensus 155 a~~~ 158 (392)
++..
T Consensus 166 ~~~~ 169 (277)
T cd05062 166 TRDI 169 (277)
T ss_pred cccc
Confidence 8643
No 340
>cd06629 STKc_MAPKKK_Bck1_like Catalytic domain of fungal Bck1-like MAP Kinase Kinase Kinases. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Bck1-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Saccharomyces cerevisiae Bck1 and Schizosaccharomyces pombe Mkh1, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Budding yeast Bck1 is part of the cell inte
Probab=99.70 E-value=7.4e-17 Score=149.10 Aligned_cols=111 Identities=22% Similarity=0.486 Sum_probs=90.4
Q ss_pred eeccCCCCCcceeEEEEEEEeecCcEEEEEEcCCCCh----------hHHHHHHHHHHH---------------------
Q psy6828 46 SLSSNPDSDFRYSAIFTPIGIYKGRIFAIKRIPKKSV----------DITRAMKKELKI--------------------- 94 (392)
Q Consensus 46 ~~~~~~lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~~----------~~~~~~~~E~~~--------------------- 94 (392)
|...+.||+|+||.||+|.+..+|+.||+|.+..... ...+.+.+|+.+
T Consensus 3 ~~~~~~lg~g~~~~vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~ 82 (272)
T cd06629 3 WVKGELIGKGTYGRVYLALNVTTGEMMAVKQVELPATIAGRHDSRQKDMVKALRSEIETLKDLDHLNIVQYLGFETTEEY 82 (272)
T ss_pred eeecceecccCceEEEEEeecCCCceeeeeeeechhhhhcccchHHHHHHHHHHHHHHHHHhcCCCCcceEEEEeccCCc
Confidence 4556789999999999999988999999998853211 123456667655
Q ss_pred --------------HHhhcCCcCCCHHHHHHHHHHHHHHHHHHhcCCcccccCCCCCceEEcCCceEEEeccccchhc
Q psy6828 95 --------------DIMENEDVKLDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLVDSRWVVKLADFGLTEFK 158 (392)
Q Consensus 95 --------------~~l~~~~~~l~~~~~~~i~~qi~~~l~ylH~~~iiiHrDlKp~NIll~~~~~~kl~DFGla~~~ 158 (392)
+++... ..+++..+..++.|++.||.|||++++ +||||||+||+++.++.++++|||+++..
T Consensus 83 ~~lv~e~~~~~~L~~~l~~~-~~l~~~~~~~~~~qi~~~l~~lH~~~i-~H~dl~~~nil~~~~~~~~l~d~~~~~~~ 158 (272)
T cd06629 83 LSIFLEYVPGGSIGSCLRTY-GRFEEQLVRFFTEQVLEGLAYLHSKGI-LHRDLKADNLLVDADGICKISDFGISKKS 158 (272)
T ss_pred eEEEEecCCCCcHHHHHhhc-cCCCHHHHHHHHHHHHHHHHHHhhCCe-eecCCChhhEEEcCCCeEEEeeccccccc
Confidence 222222 368999999999999999999999999 99999999999999999999999998754
No 341
>cd06634 STKc_TAO2 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 2. Serine/threonine kinases (STKs), thousand-and-one amino acids 2 (TAO2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Human TAO2 is also known as prostate-derived Ste20-like kinase (PSK) and was identified in a screen for overexpressed RNAs in prostate cancer. TAO2 activates both p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activatin
Probab=99.70 E-value=3.1e-17 Score=154.77 Aligned_cols=132 Identities=23% Similarity=0.315 Sum_probs=103.2
Q ss_pred eeeccCCCCCcceeEEEEEEEeecCcEEEEEEcCCCCh---hHHHHHHHHHHH---------------------------
Q psy6828 45 VSLSSNPDSDFRYSAIFTPIGIYKGRIFAIKRIPKKSV---DITRAMKKELKI--------------------------- 94 (392)
Q Consensus 45 ~~~~~~~lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~~---~~~~~~~~E~~~--------------------------- 94 (392)
.|...+.+|+|+||.||++.+..+++.+|+|.+..... ...+.+.+|+.+
T Consensus 16 ~~~~~~~lg~g~~g~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 95 (308)
T cd06634 16 LFSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYRGCYLREHTAWLVME 95 (308)
T ss_pred HHHHHHheeeCCCEEEEEEEEcCCCcEEEEEEEecccccChHHHHHHHHHHHHHHhCCCCCcccEEEEEEcCCeeEEEEE
Confidence 34556789999999999999999999999999864322 334456677665
Q ss_pred -------HHhhcCCcCCCHHHHHHHHHHHHHHHHHHhcCCcccccCCCCCceEEcCCceEEEeccccchhcccc------
Q psy6828 95 -------DIMENEDVKLDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLVDSRWVVKLADFGLTEFKRDA------ 161 (392)
Q Consensus 95 -------~~l~~~~~~l~~~~~~~i~~qi~~~l~ylH~~~iiiHrDlKp~NIll~~~~~~kl~DFGla~~~~~~------ 161 (392)
+++......+++.++..++.|++.|+.|||++++ +||||||+||+++.++.+|++|||++......
T Consensus 96 ~~~~~l~~~~~~~~~~l~~~~~~~~~~~l~~~l~~LH~~~i-~H~dl~p~nil~~~~~~~kl~dfg~~~~~~~~~~~~~~ 174 (308)
T cd06634 96 YCLGSASDLLEVHKKPLQEVEIAAVTHGALQGLAYLHSHNM-IHRDVKAGNILLSEPGLVKLGDFGSASIMAPANXFVGT 174 (308)
T ss_pred ccCCCHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHhCCc-ccCCCCHHhEEECCCCcEEECCcccceeecCcccccCC
Confidence 2222233368999999999999999999999999 99999999999999999999999987753221
Q ss_pred ----------------ccccccccceeeeeee
Q psy6828 162 ----------------EYTGTDQHSFLQHTYH 177 (392)
Q Consensus 162 ----------------~~~~~d~~s~g~~~~~ 177 (392)
.....|+||+|+++|+
T Consensus 175 ~~y~aPE~~~~~~~~~~~~~~Di~slG~il~e 206 (308)
T cd06634 175 PYWMAPEVILAMDEGQYDGKVDVWSLGITCIE 206 (308)
T ss_pred ccccCHHHHhhcccCCCCcccchHHHHHHHHH
Confidence 1123488888888877
No 342
>cd05046 PTK_CCK4 Pseudokinase domain of the Protein Tyrosine Kinase, Colon Carcinoma Kinase 4. Protein Tyrosine Kinase (PTK) family; Colon Carcinoma Kinase 4 (CCK4); pseudokinase domain. The PTKc (catalytic domain) family, to which this subfamily belongs, includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CCK4, also called protein tyrosine kinase 7 (PTK7), is an orphan receptor tyr kinase (RTK) containing an extracellular region with seven immunoglobulin domains, a transmembrane segment, and an intracellular inactive pseudokinase domain. Studies in mice reveal that CCK4 is essential for neural development. Mouse embryos containing a truncated CCK4 die perinatally and display craniorachischisis, a severe form of neural tube defect. The mechanism of action of the CCK4 pseudokinase is s
Probab=99.70 E-value=4.2e-17 Score=150.94 Aligned_cols=111 Identities=20% Similarity=0.277 Sum_probs=90.2
Q ss_pred eccCCCCCcceeEEEEEEEeec-----CcEEEEEEcCCCChh-HHHHHHHHHHH--------------------------
Q psy6828 47 LSSNPDSDFRYSAIFTPIGIYK-----GRIFAIKRIPKKSVD-ITRAMKKELKI-------------------------- 94 (392)
Q Consensus 47 ~~~~~lg~G~~g~V~~~~~~~~-----~~~vAiK~~~~~~~~-~~~~~~~E~~~-------------------------- 94 (392)
.....+|+|+||.||++..+.+ .+.|++|.+...... ..+.+.+|+.+
T Consensus 8 ~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~ 87 (275)
T cd05046 8 QEITTLGRGEFGEVFLAKAKGIEEEGGETLVLVKALQKTKDENLQSEFRRELDMFRKLSHKNVVRLLGLCREAEPHYMIL 87 (275)
T ss_pred eeeeeecccceeEEEEEEeccCCcCCCcceEEEEccCCccchHHHHHHHHHHHHHHhcCCcceeeeEEEECCCCcceEEE
Confidence 3456799999999999996543 467999998765443 45667788776
Q ss_pred ---------HHhhcCC--------cCCCHHHHHHHHHHHHHHHHHHhcCCcccccCCCCCceEEcCCceEEEeccccchh
Q psy6828 95 ---------DIMENED--------VKLDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLVDSRWVVKLADFGLTEF 157 (392)
Q Consensus 95 ---------~~l~~~~--------~~l~~~~~~~i~~qi~~~l~ylH~~~iiiHrDlKp~NIll~~~~~~kl~DFGla~~ 157 (392)
+++.... ..+++..+..++.|++.||.|||++++ +||||||+||+++.++.++++|||+++.
T Consensus 88 e~~~~~~L~~~i~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~l~~LH~~~i-~H~dlkp~Nili~~~~~~~l~~~~~~~~ 166 (275)
T cd05046 88 EYTDLGDLKQFLRATKSKDEKLKPPPLSTKQKVALCTQIALGMDHLSNARF-VHRDLAARNCLVSSQREVKVSLLSLSKD 166 (275)
T ss_pred EecCCCcHHHHHHhcccccccccccCCCHHHHHHHHHHHHHHHHHhhhcCc-ccCcCccceEEEeCCCcEEEcccccccc
Confidence 3333221 148999999999999999999999999 9999999999999999999999999864
Q ss_pred c
Q psy6828 158 K 158 (392)
Q Consensus 158 ~ 158 (392)
.
T Consensus 167 ~ 167 (275)
T cd05046 167 V 167 (275)
T ss_pred c
Confidence 3
No 343
>cd06631 STKc_YSK4 Catalytic domain of the Protein Serine/Threonine Kinase, Yeast Sps1/Ste20-related kinase 4. Serine/threonine kinases (STKs), yeast Sps1/Ste20-related kinase 4 (YSK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YSK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. YSK4 is a putative MAPKKK, whose mammalian gene has been isolated. MAPKKKs (MKKKs or MAP3Ks) phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals.
Probab=99.70 E-value=5e-17 Score=149.64 Aligned_cols=109 Identities=19% Similarity=0.378 Sum_probs=88.5
Q ss_pred eccCCCCCcceeEEEEEEEeecCcEEEEEEcCCCCh------hHHHHHHHHHHH--------------------------
Q psy6828 47 LSSNPDSDFRYSAIFTPIGIYKGRIFAIKRIPKKSV------DITRAMKKELKI-------------------------- 94 (392)
Q Consensus 47 ~~~~~lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~~------~~~~~~~~E~~~-------------------------- 94 (392)
...+.+|+|+||.||++.. .+++.+|+|.+..... .....+.+|+.+
T Consensus 3 ~~~~~ig~g~~~~v~~~~~-~~~~~~avk~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~ 81 (265)
T cd06631 3 TKGEVLGKGAYGTVYCGLT-NQGQLIAVKQVELDTSNVLAAEKEYEKLQEEVDLLKSLKHVNIVQYLGTCLDDNTISIFM 81 (265)
T ss_pred cccceEeccCCeEEEEEEE-cCCCeEEEEEeecCccchhhHHHHHHHHHHHHHHHHhcCCCCEeeEeeEeecCCeEEEEE
Confidence 3456799999999999974 5789999998864321 223456677666
Q ss_pred ---------HHhhcCCcCCCHHHHHHHHHHHHHHHHHHhcCCcccccCCCCCceEEcCCceEEEeccccchhc
Q psy6828 95 ---------DIMENEDVKLDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLVDSRWVVKLADFGLTEFK 158 (392)
Q Consensus 95 ---------~~l~~~~~~l~~~~~~~i~~qi~~~l~ylH~~~iiiHrDlKp~NIll~~~~~~kl~DFGla~~~ 158 (392)
+++.+. ..+++..+..++.|++.||.|||+.++ +|+||||+||++++++.+||+|||++...
T Consensus 82 e~~~~~~L~~~l~~~-~~~~~~~~~~~~~qi~~~l~~lH~~~i-~H~dl~p~nil~~~~~~~~l~dfg~~~~~ 152 (265)
T cd06631 82 EFVPGGSISSILNRF-GPLPEPVFCKYTKQILDGVAYLHNNCV-VHRDIKGNNVMLMPNGIIKLIDFGCARRL 152 (265)
T ss_pred ecCCCCcHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHhCCc-ccCCcCHHhEEECCCCeEEeccchhhHhh
Confidence 233322 258999999999999999999999999 99999999999999999999999998754
No 344
>cd06657 STKc_PAK4 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 4. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 4, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK4 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK4 regulates cell mo
Probab=99.70 E-value=4.2e-17 Score=152.77 Aligned_cols=109 Identities=18% Similarity=0.291 Sum_probs=90.5
Q ss_pred cCCCCCcceeEEEEEEEeecCcEEEEEEcCCCChhHHHHHHHHHHH--------------------------HHhhc---
Q psy6828 49 SNPDSDFRYSAIFTPIGIYKGRIFAIKRIPKKSVDITRAMKKELKI--------------------------DIMEN--- 99 (392)
Q Consensus 49 ~~~lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~~~~~~~~~~E~~~--------------------------~~l~~--- 99 (392)
...+|+|+||.||++....+++.||||.+........+.+.+|+.+ +++..
T Consensus 25 ~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L 104 (292)
T cd06657 25 FIKIGEGSTGIVCIATVKSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFLEGGAL 104 (292)
T ss_pred HHHcCCCCCeEEEEEEEcCCCeEEEEEEecccchhHHHHHHHHHHHHHhcCCcchhheeeEEEeCCEEEEEEecCCCCcH
Confidence 3469999999999999999999999999876554555667777765 11111
Q ss_pred ----CCcCCCHHHHHHHHHHHHHHHHHHhcCCcccccCCCCCceEEcCCceEEEeccccchhc
Q psy6828 100 ----EDVKLDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLVDSRWVVKLADFGLTEFK 158 (392)
Q Consensus 100 ----~~~~l~~~~~~~i~~qi~~~l~ylH~~~iiiHrDlKp~NIll~~~~~~kl~DFGla~~~ 158 (392)
....+++..+..++.|++.||.|||+.++ +|+||||+||+++.++.++|+|||++...
T Consensus 105 ~~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~gi-vH~dl~p~Nilv~~~~~~~l~dfg~~~~~ 166 (292)
T cd06657 105 TDIVTHTRMNEEQIAAVCLAVLKALSVLHAQGV-IHRDIKSDSILLTHDGRVKLSDFGFCAQV 166 (292)
T ss_pred HHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCe-ecCCCCHHHEEECCCCCEEEcccccceec
Confidence 11257999999999999999999999999 99999999999999999999999987654
No 345
>cd08220 STKc_Nek8 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 8. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 8 (Nek8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek8 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek8 contains an N-terminal kinase catalytic domain and a C-terminal RCC1 (regulator of chromosome condensation) domain. A double point mutation in Nek8 causes cystic kidney disease in mice that genetically resembles human autosomal recessive polycystic kidney disease (ARPKD). Nek8 is also associated with
Probab=99.70 E-value=3.9e-17 Score=149.27 Aligned_cols=113 Identities=22% Similarity=0.327 Sum_probs=91.3
Q ss_pred eeccCCCCCcceeEEEEEEEeecCcEEEEEEcCCCCh--hHHHHHHHHHHH-----------------------------
Q psy6828 46 SLSSNPDSDFRYSAIFTPIGIYKGRIFAIKRIPKKSV--DITRAMKKELKI----------------------------- 94 (392)
Q Consensus 46 ~~~~~~lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~~--~~~~~~~~E~~~----------------------------- 94 (392)
|...+.+|+|+||.||++.+..+++.+|+|.+..... ...+.+.+|+.+
T Consensus 2 y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~e~~ 81 (256)
T cd08220 2 YEKIRVVGRGAFGIVHLCRRKADQKLVIIKQIPVEQMTKDERLAAQNECQVLKLLSHPNIIEYYENFLEDKALMIVMEYA 81 (256)
T ss_pred ceEEEEecccCceEEEEEEEcCCCcEEEEEEEeccccccHHHHHHHHHHHHHhhCCCCchhheeeeEecCCEEEEEEecC
Confidence 3445679999999999999999999999999976543 344567777666
Q ss_pred ------HHhhcC-CcCCCHHHHHHHHHHHHHHHHHHhcCCcccccCCCCCceEEcCC-ceEEEeccccchhcc
Q psy6828 95 ------DIMENE-DVKLDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLVDSR-WVVKLADFGLTEFKR 159 (392)
Q Consensus 95 ------~~l~~~-~~~l~~~~~~~i~~qi~~~l~ylH~~~iiiHrDlKp~NIll~~~-~~~kl~DFGla~~~~ 159 (392)
+++... ...+++..+..++.|++.+|.|||++++ +|+||||+||+++.+ +.+|++|||++....
T Consensus 82 ~~~~L~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i-~h~dl~~~nil~~~~~~~~~l~d~~~~~~~~ 153 (256)
T cd08220 82 PGGTLAEYIQKRCNSLLDEDTILHFFVQILLALHHVHTKLI-LHRDLKTQNILLDKHKMVVKIGDFGISKILS 153 (256)
T ss_pred CCCCHHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHhCCe-ecCCCCHHHEEEcCCCCEEEEccCCCceecC
Confidence 233221 2348999999999999999999999999 999999999999865 468999999987554
No 346
>cd07840 STKc_CDK9_like Catalytic domain of Cyclin-Dependent protein Kinase 9-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK9 and CDK12 from higher eukaryotes, yeast BUR1, C-type plant CDKs (CdkC), and similar proteins. CDK9, BUR1, and CdkC are functionally equivalent. They act as a kinase for the C-terminal domain of RNA po
Probab=99.70 E-value=3.2e-17 Score=152.35 Aligned_cols=110 Identities=25% Similarity=0.466 Sum_probs=90.5
Q ss_pred cCCCCCcceeEEEEEEEeecCcEEEEEEcCCCC--hhHHHHHHHHHHH--------------------------------
Q psy6828 49 SNPDSDFRYSAIFTPIGIYKGRIFAIKRIPKKS--VDITRAMKKELKI-------------------------------- 94 (392)
Q Consensus 49 ~~~lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~--~~~~~~~~~E~~~-------------------------------- 94 (392)
.+.+|+|+||.||++.+..+++.||+|.+.... ......+.+|+.+
T Consensus 4 ~~~l~~g~~~~vy~~~~~~~~~~~~~K~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~lv~e~~~ 83 (287)
T cd07840 4 IAQIGEGTYGQVYKARNKKTGELVALKKIRMENEKEGFPITAIREIKLLQKLRHPNIVRLKEIVTSKGKGSIYMVFEYMD 83 (287)
T ss_pred eEEeccCCCeEEEEEEECCCCeEEEEEEEecccccccchHHHHHHHHHHHhccCCCeeeheeeEecCCCCcEEEEecccc
Confidence 456899999999999999899999999998653 2233445566654
Q ss_pred ----HHhhcCCcCCCHHHHHHHHHHHHHHHHHHhcCCcccccCCCCCceEEcCCceEEEeccccchhcc
Q psy6828 95 ----DIMENEDVKLDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLVDSRWVVKLADFGLTEFKR 159 (392)
Q Consensus 95 ----~~l~~~~~~l~~~~~~~i~~qi~~~l~ylH~~~iiiHrDlKp~NIll~~~~~~kl~DFGla~~~~ 159 (392)
+++......+++..+..++.|++.||.|||+.++ +|+||||+||++++++.+||+|||++....
T Consensus 84 ~~l~~~~~~~~~~~~~~~~~~i~~~i~~al~~LH~~~~-~h~dl~p~nil~~~~~~~~l~d~g~~~~~~ 151 (287)
T cd07840 84 HDLTGLLDSPEVKFTESQIKCYMKQLLEGLQYLHSNGI-LHRDIKGSNILINNDGVLKLADFGLARPYT 151 (287)
T ss_pred ccHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHCCc-eeccCcHHHeEEcCCCCEEEccccceeecc
Confidence 1222222368999999999999999999999999 999999999999999999999999987654
No 347
>cd08217 STKc_Nek2 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 2. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 2 (Nek2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek2 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek2 subfamily includes Aspergillus nidulans NIMA kinase, the founding member of the Nek family, which was identified in a screen for cell cycle mutants prevented from entering mitosis. NIMA is essential for mitotic entry and progression through mitosis, and its degradation is essential for mitotic exi
Probab=99.70 E-value=3.8e-17 Score=149.87 Aligned_cols=112 Identities=21% Similarity=0.331 Sum_probs=91.9
Q ss_pred ccCCCCCcceeEEEEEEEeecCcEEEEEEcCCCCh--hHHHHHHHHHHH----------------------------HH-
Q psy6828 48 SSNPDSDFRYSAIFTPIGIYKGRIFAIKRIPKKSV--DITRAMKKELKI----------------------------DI- 96 (392)
Q Consensus 48 ~~~~lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~~--~~~~~~~~E~~~----------------------------~~- 96 (392)
..+.+|.|+||.||++.+..+++.||+|.+..... ...+.+.+|+.+ ++
T Consensus 4 ~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~~~~e~~ 83 (265)
T cd08217 4 VLETIGKGSFGTVRKVRRKSDGKILVWKEIDYGNMTEKEKQQLVSEVNILRELKHPNIVRYYDRIIDRSNQTLYIVMEYC 83 (265)
T ss_pred eeeeeccCCCeEEEEeeecCCCCEEEEEEEecccCCHHHHHHHHHHHHHHHhcCCCccceeeeeeecCCCCEEEEEehhc
Confidence 34679999999999999999999999999875433 334556677665 22
Q ss_pred --------hhc---CCcCCCHHHHHHHHHHHHHHHHHHh-----cCCcccccCCCCCceEEcCCceEEEeccccchhccc
Q psy6828 97 --------MEN---EDVKLDNMFIASLVADILRGMLYLH-----DSALRYHGNLKASNCLVDSRWVVKLADFGLTEFKRD 160 (392)
Q Consensus 97 --------l~~---~~~~l~~~~~~~i~~qi~~~l~ylH-----~~~iiiHrDlKp~NIll~~~~~~kl~DFGla~~~~~ 160 (392)
+.. ....+++..+..++.|++.||.||| +.++ +|+||||+||+++.++.+|++|||++.....
T Consensus 84 ~~~~L~~~l~~~~~~~~~l~~~~~~~~~~~i~~~l~~lH~~~~~~~~i-~h~dl~p~nili~~~~~~kl~d~g~~~~~~~ 162 (265)
T cd08217 84 EGGDLAQLIQKCKKERKYIEEEFIWRILTQLLLALYECHNRSDPGNTV-LHRDLKPANIFLDANNNVKLGDFGLAKILGH 162 (265)
T ss_pred cCCCHHHHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHhcCccccCcc-eecCCCHHHEEEecCCCEEEecccccccccC
Confidence 211 1336889999999999999999999 8889 9999999999999999999999999887543
No 348
>cd05098 PTKc_FGFR1 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 1. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 1 (FGFR1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR1 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=99.70 E-value=9.4e-17 Score=151.38 Aligned_cols=114 Identities=22% Similarity=0.279 Sum_probs=89.8
Q ss_pred eeeeccCCCCCcceeEEEEEEEee-------cCcEEEEEEcCCCC-hhHHHHHHHHHHH---------------------
Q psy6828 44 QVSLSSNPDSDFRYSAIFTPIGIY-------KGRIFAIKRIPKKS-VDITRAMKKELKI--------------------- 94 (392)
Q Consensus 44 ~~~~~~~~lg~G~~g~V~~~~~~~-------~~~~vAiK~~~~~~-~~~~~~~~~E~~~--------------------- 94 (392)
..|...+.||+|+||.||++.+.. +...+|+|.+.... ......+.+|+.+
T Consensus 18 ~~~~i~~~lg~G~~g~V~~~~~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~~~ 97 (307)
T cd05098 18 DRLVLGKPLGEGCFGQVVMAEAIGLDKEKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQDG 97 (307)
T ss_pred HHeEEeeeeccCCCeeEEEeEEeccCCcccCccceEEEEeccCCCChHHHHHHHHHHHHHHHhcCCCCEeeEEEEEecCC
Confidence 456778899999999999998643 23579999997542 2334456666654
Q ss_pred ---------------HHhhcC---------------CcCCCHHHHHHHHHHHHHHHHHHhcCCcccccCCCCCceEEcCC
Q psy6828 95 ---------------DIMENE---------------DVKLDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLVDSR 144 (392)
Q Consensus 95 ---------------~~l~~~---------------~~~l~~~~~~~i~~qi~~~l~ylH~~~iiiHrDlKp~NIll~~~ 144 (392)
+++... ...+++.++..++.|++.||.|||++++ +||||||+||+++.+
T Consensus 98 ~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~lH~~gi-~H~dlkp~Nill~~~ 176 (307)
T cd05098 98 PLYVIVEYASKGNLREYLRARRPPGMEYCYNPTQVPEEQLSFKDLVSCAYQVARGMEYLASKKC-IHRDLAARNVLVTED 176 (307)
T ss_pred ceEEEEecCCCCcHHHHHHhcCCcccccccccccCccccCCHHHHHHHHHHHHHHHHHHHHCCc-ccccccHHheEEcCC
Confidence 233221 1247888999999999999999999999 999999999999999
Q ss_pred ceEEEeccccchhc
Q psy6828 145 WVVKLADFGLTEFK 158 (392)
Q Consensus 145 ~~~kl~DFGla~~~ 158 (392)
+.+||+|||+++..
T Consensus 177 ~~~kL~dfg~a~~~ 190 (307)
T cd05098 177 NVMKIADFGLARDI 190 (307)
T ss_pred CcEEECCCcccccc
Confidence 99999999998754
No 349
>cd05112 PTKc_Itk Catalytic domain of the Protein Tyrosine Kinase, Interleukin-2-inducible T-cell Kinase. Protein Tyrosine Kinase (PTK) family; Interleukin-2 (IL-2)-inducible T-cell kinase (Itk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Itk (also known as Tsk or Emt) is a member of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activ
Probab=99.70 E-value=5.9e-17 Score=148.31 Aligned_cols=107 Identities=27% Similarity=0.449 Sum_probs=88.2
Q ss_pred cCCCCCcceeEEEEEEEeecCcEEEEEEcCCCChhHHHHHHHHHHH----------------------------------
Q psy6828 49 SNPDSDFRYSAIFTPIGIYKGRIFAIKRIPKKSVDITRAMKKELKI---------------------------------- 94 (392)
Q Consensus 49 ~~~lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~~~~~~~~~~E~~~---------------------------------- 94 (392)
.+.+|+|+||.||++.+. +++.+|+|.+...... ...+.+|+.+
T Consensus 9 ~~~ig~g~~g~v~~~~~~-~~~~~~~k~~~~~~~~-~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~~~~~~L 86 (256)
T cd05112 9 VQEIGSGQFGLVWLGYWL-EKRKVAIKTIREGAMS-EEDFIEEAQVMMKLSHPKLVQLYGVCTERSPICLVFEFMEHGCL 86 (256)
T ss_pred EeeecCcccceEEEEEEe-CCCeEEEEECCCCCCC-HHHHHHHHHHHHhCCCCCeeeEEEEEccCCceEEEEEcCCCCcH
Confidence 467999999999999864 4778999998765443 2346667666
Q ss_pred -HHhhcCCcCCCHHHHHHHHHHHHHHHHHHhcCCcccccCCCCCceEEcCCceEEEeccccchhc
Q psy6828 95 -DIMENEDVKLDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLVDSRWVVKLADFGLTEFK 158 (392)
Q Consensus 95 -~~l~~~~~~l~~~~~~~i~~qi~~~l~ylH~~~iiiHrDlKp~NIll~~~~~~kl~DFGla~~~ 158 (392)
+++......+++..+..++.|++.|+.|||+.++ +||||||+||+++.++.+||+|||++...
T Consensus 87 ~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~i-~h~dl~p~ni~i~~~~~~~l~d~g~~~~~ 150 (256)
T cd05112 87 SDYLRAQRGKFSQETLLGMCLDVCEGMAYLESSNV-IHRDLAARNCLVGENQVVKVSDFGMTRFV 150 (256)
T ss_pred HHHHHhCccCCCHHHHHHHHHHHHHHHHHHHHCCc-cccccccceEEEcCCCeEEECCCcceeec
Confidence 3444444468999999999999999999999999 99999999999999999999999988643
No 350
>cd07829 STKc_CDK_like Catalytic domain of Cyclin-Dependent protein Kinase-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase (CDK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKs are partly regulated by their subcellular localization, which defines substrate phosphorylation and the resulting specific function. CDK1, CDK2, CDK4, and CDK6 have well-defined functions in the cell cycle, such as the regulation of the
Probab=99.70 E-value=5e-17 Score=150.75 Aligned_cols=109 Identities=27% Similarity=0.437 Sum_probs=90.2
Q ss_pred cCCCCCcceeEEEEEEEeecCcEEEEEEcCCCC--hhHHHHHHHHHHH--------------------------------
Q psy6828 49 SNPDSDFRYSAIFTPIGIYKGRIFAIKRIPKKS--VDITRAMKKELKI-------------------------------- 94 (392)
Q Consensus 49 ~~~lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~--~~~~~~~~~E~~~-------------------------------- 94 (392)
...+|+|+||.||+|.+..+++.||+|.+.... ....+.+.+|+.+
T Consensus 4 ~~~ig~g~~~~vy~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~~v~e~~~~~ 83 (282)
T cd07829 4 LEKLGEGTYGVVYKARDKKTGEIVALKKIRLDNEEEGIPSTALREISLLKELKHPNIVKLLDVIHTERKLYLVFEYCDMD 83 (282)
T ss_pred ehcccccCcceEEEeeecCCCcEEEEEEeccccccccccHHHHHHHHHHHhcCCCCHHHHHhhhhcCCceEEEecCcCcC
Confidence 456899999999999999999999999998653 2223445555554
Q ss_pred --HHhhcCCcCCCHHHHHHHHHHHHHHHHHHhcCCcccccCCCCCceEEcCCceEEEeccccchhc
Q psy6828 95 --DIMENEDVKLDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLVDSRWVVKLADFGLTEFK 158 (392)
Q Consensus 95 --~~l~~~~~~l~~~~~~~i~~qi~~~l~ylH~~~iiiHrDlKp~NIll~~~~~~kl~DFGla~~~ 158 (392)
+++......+++..+..++.|++.||.|||+.++ +||||+|+||++++++.+||+|||+++..
T Consensus 84 l~~~i~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~i-~H~~l~~~ni~~~~~~~~~l~d~g~~~~~ 148 (282)
T cd07829 84 LKKYLDKRPGPLSPNLIKSIMYQLLRGLAYCHSHRI-LHRDLKPQNILINRDGVLKLADFGLARAF 148 (282)
T ss_pred HHHHHHhhccCCCHHHHHHHHHHHHHHHHHHHHCCc-ccCCCChheEEEcCCCCEEEecCCccccc
Confidence 3333332468999999999999999999999999 99999999999999999999999998754
No 351
>cd07838 STKc_CDK4_6_like Catalytic domain of Cyclin-Dependent protein Kinase 4 and 6-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) and CDK6-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4/6-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 and CDK6 partner with D-type cyclins to regulate the early G1 phase of the cell cycle. They are the first kinase activated by mitogenic signals to release cells from the G0 arrested state. CDK4 and CDK6 are both
Probab=99.70 E-value=5.1e-17 Score=151.08 Aligned_cols=110 Identities=26% Similarity=0.412 Sum_probs=86.9
Q ss_pred ccCCCCCcceeEEEEEEEeecCcEEEEEEcCCCCh--hHHHHHHHHHHH-------------------------------
Q psy6828 48 SSNPDSDFRYSAIFTPIGIYKGRIFAIKRIPKKSV--DITRAMKKELKI------------------------------- 94 (392)
Q Consensus 48 ~~~~lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~~--~~~~~~~~E~~~------------------------------- 94 (392)
..+.+|+|+||.||++.+..+++.||+|.+..... .....+.+|+.+
T Consensus 3 ~~~~l~~g~~~~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~~i~~~~~~~~~~~~~~~~~~~ 82 (287)
T cd07838 3 ELAEIGEGAYGTVYKARDLNTGRFVALKKVRVPLSEEGIPLSTLREIALLKQLESFEHPNIVRLLDVCHGPRTDRELKLT 82 (287)
T ss_pred EEEEecccCceEEEEEEECCCCCEEEEEEeccccccchhhhhHHHHHHHHHHhhccCCCCcceEEEEEeeccCCCCceeE
Confidence 34568999999999999988899999999974322 112233344332
Q ss_pred -----------HHhhc-CCcCCCHHHHHHHHHHHHHHHHHHhcCCcccccCCCCCceEEcCCceEEEeccccchhc
Q psy6828 95 -----------DIMEN-EDVKLDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLVDSRWVVKLADFGLTEFK 158 (392)
Q Consensus 95 -----------~~l~~-~~~~l~~~~~~~i~~qi~~~l~ylH~~~iiiHrDlKp~NIll~~~~~~kl~DFGla~~~ 158 (392)
+++.. ....+++..+..++.|++.||.|||+.++ +|+||||+||+++.++.+||+|||++...
T Consensus 83 l~~e~~~~~l~~~l~~~~~~~l~~~~~~~~~~~i~~al~~LH~~~i-~h~~l~~~nili~~~~~~~l~dfg~~~~~ 157 (287)
T cd07838 83 LVFEHVDQDLATYLSKCPKPGLPPETIKDLMRQLLRGVDFLHSHRI-VHRDLKPQNILVTSDGQVKIADFGLARIY 157 (287)
T ss_pred EEehhcccCHHHHHHHccCCCCCHHHHHHHHHHHHHHHHHHHHCCe-eeccCChhhEEEccCCCEEEeccCcceec
Confidence 11222 12258999999999999999999999999 99999999999999999999999998764
No 352
>cd08215 STKc_Nek Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase (Nek) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek family is composed of 11 different mammalian members (Nek1-11) with similarity to the catalytic domain of Aspergillus nidulans NIMA kinase, the founding member of the Nek family which was identified in a screen for cell cycle mutants that were prevented from entering mitosis. Neks contain a conserved N-terminal catalytic domain and a more divergent C-terminal regulatory region of various sizes and structures. They
Probab=99.69 E-value=1e-16 Score=146.30 Aligned_cols=111 Identities=18% Similarity=0.319 Sum_probs=92.9
Q ss_pred ccCCCCCcceeEEEEEEEeecCcEEEEEEcCCCCh--hHHHHHHHHHHH-------------------------------
Q psy6828 48 SSNPDSDFRYSAIFTPIGIYKGRIFAIKRIPKKSV--DITRAMKKELKI------------------------------- 94 (392)
Q Consensus 48 ~~~~lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~~--~~~~~~~~E~~~------------------------------- 94 (392)
..+.+|+|+||.||++.+..+++.||+|.+..... ...+.+.+|++.
T Consensus 4 ~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~~~~~lv~e~~~~ 83 (258)
T cd08215 4 IIKQIGKGSFGKVYLVRRKSDGKLYVLKEIDLSNMSEKEREDALNEVKILKKLNHPNIIKYYESFEEKGKLCIVMEYADG 83 (258)
T ss_pred EEeeeccCCCeEEEEEEEcCCCcEEEEEEeecccCChHHHHHHHHHHHHHHhcCCCChhheEEEEecCCEEEEEEEecCC
Confidence 45679999999999999998999999999976543 445566777665
Q ss_pred ----HHhhcC---CcCCCHHHHHHHHHHHHHHHHHHhcCCcccccCCCCCceEEcCCceEEEeccccchhcc
Q psy6828 95 ----DIMENE---DVKLDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLVDSRWVVKLADFGLTEFKR 159 (392)
Q Consensus 95 ----~~l~~~---~~~l~~~~~~~i~~qi~~~l~ylH~~~iiiHrDlKp~NIll~~~~~~kl~DFGla~~~~ 159 (392)
+++... ...+++.++..++.|++.||.|||++++ +|+||+|+||+++.++.++|+|||++....
T Consensus 84 ~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~-~H~dl~~~nil~~~~~~~~l~d~~~~~~~~ 154 (258)
T cd08215 84 GDLSQKIKKQKKEGKPFPEEQILDWFVQLCLALKYLHSRKI-LHRDIKPQNIFLTSNGLVKLGDFGISKVLS 154 (258)
T ss_pred CcHHHHHHHhhccCCCcCHHHHHHHHHHHHHHHHHHHhCCE-ecccCChHHeEEcCCCcEEECCccceeecc
Confidence 333322 2468999999999999999999999999 999999999999999999999999987643
No 353
>smart00219 TyrKc Tyrosine kinase, catalytic domain. Phosphotransferases. Tyrosine-specific kinase subfamily.
Probab=99.69 E-value=1e-16 Score=146.51 Aligned_cols=110 Identities=25% Similarity=0.356 Sum_probs=91.6
Q ss_pred cCCCCCcceeEEEEEEEeecC----cEEEEEEcCCCChh-HHHHHHHHHHH-----------------------------
Q psy6828 49 SNPDSDFRYSAIFTPIGIYKG----RIFAIKRIPKKSVD-ITRAMKKELKI----------------------------- 94 (392)
Q Consensus 49 ~~~lg~G~~g~V~~~~~~~~~----~~vAiK~~~~~~~~-~~~~~~~E~~~----------------------------- 94 (392)
.+.+|.|+||.||++.+..++ ..||+|.+...... ..+.+.+|+..
T Consensus 4 ~~~lg~g~~g~v~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~i~e~~ 83 (258)
T smart00219 4 GKKLGEGAFGEVYKGTLKGLSGEKEVEVAVKTLKEDADEQQIEEFLREARIMRKLDHPNIVKLLGVCTEEEPLMIVMEYM 83 (258)
T ss_pred cceeccCCCcceEEEEecCCCCCCCceEEEEEccCCCChHHHHHHHHHHHHHHhcCCCchheEEEEEcCCCeeEEEEecc
Confidence 467999999999999988766 89999999765443 55677777666
Q ss_pred ------HHhhcCCcC-CCHHHHHHHHHHHHHHHHHHhcCCcccccCCCCCceEEcCCceEEEeccccchhcc
Q psy6828 95 ------DIMENEDVK-LDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLVDSRWVVKLADFGLTEFKR 159 (392)
Q Consensus 95 ------~~l~~~~~~-l~~~~~~~i~~qi~~~l~ylH~~~iiiHrDlKp~NIll~~~~~~kl~DFGla~~~~ 159 (392)
+++...... +++..+..++.|++.||.|||++++ +||||||+||++++++.++|+|||++....
T Consensus 84 ~~~~l~~~~~~~~~~~~~~~~~~~~~~ql~~~l~~lh~~~~-~h~dl~~~nil~~~~~~~~l~dfg~~~~~~ 154 (258)
T smart00219 84 EGGDLLDYLRKNRPKELSLSDLLSFALQIARGMEYLESKNF-IHRDLAARNCLVGENLVVKISDFGLSRDLY 154 (258)
T ss_pred CCCCHHHHHHhhhhccCCHHHHHHHHHHHHHHHHHHhcCCe-eecccccceEEEccCCeEEEcccCCceecc
Confidence 223222222 8999999999999999999999999 999999999999999999999999987554
No 354
>cd06618 PKc_MKK7 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 7. Protein kinases (PKs), MAP kinase kinase 7 (MKK7) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK7 is a dual-specificity PK that phosphorylates and activates it
Probab=99.69 E-value=4.5e-17 Score=152.69 Aligned_cols=111 Identities=17% Similarity=0.313 Sum_probs=87.8
Q ss_pred eccCCCCCcceeEEEEEEEeecCcEEEEEEcCCCCh-hHHHHHHHHHHH-------------------------------
Q psy6828 47 LSSNPDSDFRYSAIFTPIGIYKGRIFAIKRIPKKSV-DITRAMKKELKI------------------------------- 94 (392)
Q Consensus 47 ~~~~~lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~~-~~~~~~~~E~~~------------------------------- 94 (392)
.....+|+|+||.||++.+..+++.||||.+++... .....+..|+..
T Consensus 18 ~~~~~lg~g~~~~v~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~~~~~~v~e~~~ 97 (296)
T cd06618 18 ENLGEIGSGTCGQVYKMRFKKTGHVMAVKQMRRTGNKEENKRILMDLDVVLKSHDCPYIVKCYGYFITDSDVFICMELMS 97 (296)
T ss_pred eeeeEeeccCCeEEEEEEECCCCeEEEEEEEeccCChHHHHHHHHHHHHHHhccCCCchHhhheeeecCCeEEEEeeccC
Confidence 446679999999999999988899999999975432 223334444432
Q ss_pred ----HHhhcCCcCCCHHHHHHHHHHHHHHHHHHhc-CCcccccCCCCCceEEcCCceEEEeccccchhc
Q psy6828 95 ----DIMENEDVKLDNMFIASLVADILRGMLYLHD-SALRYHGNLKASNCLVDSRWVVKLADFGLTEFK 158 (392)
Q Consensus 95 ----~~l~~~~~~l~~~~~~~i~~qi~~~l~ylH~-~~iiiHrDlKp~NIll~~~~~~kl~DFGla~~~ 158 (392)
.++......+++..+..++.|++.||.|||+ .++ +||||+|+||++++++.+||+|||++...
T Consensus 98 ~~l~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~i-~H~dl~p~nill~~~~~~kL~dfg~~~~~ 165 (296)
T cd06618 98 TCLDKLLKRIQGPIPEDILGKMTVAIVKALHYLKEKHGV-IHRDVKPSNILLDASGNVKLCDFGISGRL 165 (296)
T ss_pred cCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhhCCE-ecCCCcHHHEEEcCCCCEEECccccchhc
Confidence 1111122358899999999999999999997 588 99999999999999999999999998754
No 355
>cd05087 PTKc_Aatyk1_Aatyk3 Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases 1 and 3. Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 1 (Aatyk1) and Aatyk3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk1 and Aatyk3 are members of the Aatyk subfamily of proteins. Aatyk3 is a receptor kinase containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 has a similar domain arrangement but without the transmembrane segment and is thus, a cytoplasmic (or nonreceptor) kinase. The expression of Aatyk1 (also referred simply as Aatyk) is upregulated during growth arrest and apoptosis in myeloid cells
Probab=99.69 E-value=1.2e-16 Score=147.48 Aligned_cols=107 Identities=19% Similarity=0.302 Sum_probs=83.8
Q ss_pred CCCCCcceeEEEEEEEe--ecCcEEEEEEcCCCCh-hHHHHHHHHHHH--------------------------------
Q psy6828 50 NPDSDFRYSAIFTPIGI--YKGRIFAIKRIPKKSV-DITRAMKKELKI-------------------------------- 94 (392)
Q Consensus 50 ~~lg~G~~g~V~~~~~~--~~~~~vAiK~~~~~~~-~~~~~~~~E~~~-------------------------------- 94 (392)
+.||+|+||.||+|... .++..+|+|.++.... .....+.+|+.+
T Consensus 1 ~~lg~G~~g~Vy~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~g 80 (269)
T cd05087 1 KEIGNGWFGKVILGEVNSGYTPAQVVVKELRVSASVQEQMKFLEEAQPYRSLQHSNLLQCLGQCTEVTPYLLVMEFCPLG 80 (269)
T ss_pred CcccccCCceEEEEEEcCCCCceEEEEEecCCCCChHHHHHHHHHHHHHHhCCCCCEeeEEEEEcCCCCcEEEEECCCCC
Confidence 36899999999999754 3456899999876542 333456777666
Q ss_pred ---HHhhc----CCcCCCHHHHHHHHHHHHHHHHHHhcCCcccccCCCCCceEEcCCceEEEeccccchh
Q psy6828 95 ---DIMEN----EDVKLDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLVDSRWVVKLADFGLTEF 157 (392)
Q Consensus 95 ---~~l~~----~~~~l~~~~~~~i~~qi~~~l~ylH~~~iiiHrDlKp~NIll~~~~~~kl~DFGla~~ 157 (392)
+++.. ....+++..+..++.|++.|+.|||+.++ +||||||+||+++.++.+||+|||+++.
T Consensus 81 ~L~~~l~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~i-~H~dlkp~nil~~~~~~~kL~dfg~~~~ 149 (269)
T cd05087 81 DLKGYLRSCRKAELMTPDPTTLQRMACEIALGLLHLHKNNF-IHSDLALRNCLLTADLTVKIGDYGLSHN 149 (269)
T ss_pred cHHHHHHHhhhcccccccHHHHHHHHHHHHHHHHHHHHCCE-eccccCcceEEEcCCCcEEECCcccccc
Confidence 22221 11235667788899999999999999999 9999999999999999999999999864
No 356
>cd06641 STKc_MST3 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 3. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST3 phosphorylates the STK NDR and may play a role in cell cycle progression and cell morphology. It may also regulate paxillin and consequently, cell migration. MST3 is present in human placenta, where it plays an essential role in the oxidative stress-induced apoptosis of trophoblasts in normal spontaneous delivery. Dysregulation of trophoblast apoptosis may result in pregnancy complications such as preeclampsia and int
Probab=99.69 E-value=3.9e-17 Score=151.55 Aligned_cols=111 Identities=29% Similarity=0.434 Sum_probs=91.8
Q ss_pred eeeccCCCCCcceeEEEEEEEeecCcEEEEEEcCCCCh-hHHHHHHHHHHH-----------------------------
Q psy6828 45 VSLSSNPDSDFRYSAIFTPIGIYKGRIFAIKRIPKKSV-DITRAMKKELKI----------------------------- 94 (392)
Q Consensus 45 ~~~~~~~lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~~-~~~~~~~~E~~~----------------------------- 94 (392)
.|...+.||+|+||.||++.+..+++.||+|.+..... .....+.+|+..
T Consensus 5 ~~~~~~~ig~G~~~~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~ 84 (277)
T cd06641 5 LFTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYYGSYLKDTKLWIIMEYL 84 (277)
T ss_pred hhhhheeEeecCCeEEEEEEECCCCcEEEEEEeccccchHHHHHHHHHHHHHHhcCCCCEeEEEEEEEeCCeEEEEEEeC
Confidence 34456779999999999999888999999999865432 334556667666
Q ss_pred ------HHhhcCCcCCCHHHHHHHHHHHHHHHHHHhcCCcccccCCCCCceEEcCCceEEEeccccchhc
Q psy6828 95 ------DIMENEDVKLDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLVDSRWVVKLADFGLTEFK 158 (392)
Q Consensus 95 ------~~l~~~~~~l~~~~~~~i~~qi~~~l~ylH~~~iiiHrDlKp~NIll~~~~~~kl~DFGla~~~ 158 (392)
+++.+ ..+++..+..++.|++.++.|||++++ +|+||||+||+++.++.++++|||++...
T Consensus 85 ~~~~l~~~i~~--~~~~~~~~~~~~~~l~~~l~~lh~~~i-~h~dl~p~Ni~i~~~~~~~l~dfg~~~~~ 151 (277)
T cd06641 85 GGGSALDLLEP--GPLDETQIATILREILKGLDYLHSEKK-IHRDIKAANVLLSEHGEVKLADFGVAGQL 151 (277)
T ss_pred CCCcHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHccCCe-ecCCCCHHhEEECCCCCEEEeecccceec
Confidence 22222 258999999999999999999999999 99999999999999999999999988654
No 357
>cd05145 RIO1_like RIO kinase family; RIO1, RIO3 and similar proteins, catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO1 is present in archaea, bacteria and eukaryotes. In addition, RIO3 is present in multicellular eukaryotes. RIO1 is essential for survival and is required for 18S rRNA processing, proper cell cycle pro
Probab=99.69 E-value=9.3e-17 Score=140.76 Aligned_cols=109 Identities=17% Similarity=0.186 Sum_probs=84.0
Q ss_pred cCCCCCcceeEEEEEEEeecCcEEEEEEcCCCChh--------------------------HHHHHHHHHHH--------
Q psy6828 49 SNPDSDFRYSAIFTPIGIYKGRIFAIKRIPKKSVD--------------------------ITRAMKKELKI-------- 94 (392)
Q Consensus 49 ~~~lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~~~--------------------------~~~~~~~E~~~-------- 94 (392)
.++||+|+||.||+|.+. +|+.||||+++..... ......+|...
T Consensus 2 ~~~ig~G~~~~Vy~a~~~-~g~~vavKv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~ 80 (190)
T cd05145 2 NGCISTGKEANVYHARTG-DGEELAVKIYKTSTLSFKDRDKYIEGDPRFRSRYSKSNPRKLVFAWAEKEFRNLKRLYEAG 80 (190)
T ss_pred CceeecCCCcEEEEEEcC-CCCEEEEEEEEcCcceEeeHHHHhcCCcccccccccCCHHHHHHHHHHHHHHHHHHHHhCC
Confidence 357999999999999977 8999999998764210 01112334442
Q ss_pred ----------------HHhhcC--------CcCCCHHHHHHHHHHHHHHHHHHhc-CCcccccCCCCCceEEcCCceEEE
Q psy6828 95 ----------------DIMENE--------DVKLDNMFIASLVADILRGMLYLHD-SALRYHGNLKASNCLVDSRWVVKL 149 (392)
Q Consensus 95 ----------------~~l~~~--------~~~l~~~~~~~i~~qi~~~l~ylH~-~~iiiHrDlKp~NIll~~~~~~kl 149 (392)
+++... ...++..++..++.|++.++.++|+ +|+ +||||||+|||++ ++.++|
T Consensus 81 i~~p~~~~~~~~~lVmE~~~g~~~~~~~l~~~~~~~~~~~~i~~~l~~~l~~lH~~~gi-vHrDlkP~NIll~-~~~~~l 158 (190)
T cd05145 81 VPVPEPILLKKNVLVMEFIGDDGSPAPRLKDVPLEEEEAEELYEQVVEQMRRLYQEAGL-VHGDLSEYNILYH-DGKPYI 158 (190)
T ss_pred CCCceEEEecCCEEEEEEecCCCchhhhhhhccCCHHHHHHHHHHHHHHHHHHHHhCCE-ecCCCChhhEEEE-CCCEEE
Confidence 222211 1246778899999999999999999 999 9999999999998 889999
Q ss_pred eccccchhccc
Q psy6828 150 ADFGLTEFKRD 160 (392)
Q Consensus 150 ~DFGla~~~~~ 160 (392)
+|||++.....
T Consensus 159 iDFG~a~~~~~ 169 (190)
T cd05145 159 IDVSQAVELDH 169 (190)
T ss_pred EEcccceecCC
Confidence 99999987654
No 358
>cd05045 PTKc_RET Catalytic domain of the Protein Tyrosine Kinase, REarranged during Transfection protein. Protein Tyrosine Kinase (PTK) family; RET (REarranged during Transfection) protein; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. RET is a receptor tyr kinase (RTK) containing an extracellular region with four cadherin-like repeats, a calcium-binding site, and a cysteine-rich domain, a transmembrane segment, and an intracellular catalytic domain. It is part of a multisubunit complex that binds glial-derived neurotropic factor (GDNF) family ligands (GFLs) including GDNF, neurturin, artemin, and persephin. GFLs bind RET along with four GPI-anchored coreceptors, bringing two RET molecules together, leadi
Probab=99.69 E-value=2.9e-16 Score=146.75 Aligned_cols=129 Identities=22% Similarity=0.293 Sum_probs=98.4
Q ss_pred ccCCCCCcceeEEEEEEEee-----cCcEEEEEEcCCCCh-hHHHHHHHHHHH---------------------------
Q psy6828 48 SSNPDSDFRYSAIFTPIGIY-----KGRIFAIKRIPKKSV-DITRAMKKELKI--------------------------- 94 (392)
Q Consensus 48 ~~~~lg~G~~g~V~~~~~~~-----~~~~vAiK~~~~~~~-~~~~~~~~E~~~--------------------------- 94 (392)
..+.+|+|+||.||+|.+.. ....+|+|.+..... ...+.+.+|+.+
T Consensus 4 ~~~~lg~g~~g~vy~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e 83 (290)
T cd05045 4 LGKTLGEGEFGKVVKATAFRLKGRAGYTTVAVKMLKENASSSELRDLLSEFNLLKQVNHPHVIKLYGACSQDGPLLLIVE 83 (290)
T ss_pred ccccccCcCCcceEEEEEecCCCCCcceeEEEEecCCCCCHHHHHHHHHHHHHHhhCCCCCEeeEEEEEecCCCcEEEEE
Confidence 35679999999999998653 235799999876543 344567778766
Q ss_pred --------HHhhc-----------------------CCcCCCHHHHHHHHHHHHHHHHHHhcCCcccccCCCCCceEEcC
Q psy6828 95 --------DIMEN-----------------------EDVKLDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLVDS 143 (392)
Q Consensus 95 --------~~l~~-----------------------~~~~l~~~~~~~i~~qi~~~l~ylH~~~iiiHrDlKp~NIll~~ 143 (392)
+++.. ....+++..+..++.|++.||.|||++++ +||||||+|||+++
T Consensus 84 ~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~i-vH~dikp~nill~~ 162 (290)
T cd05045 84 YAKYGSLRSFLRESRKVGPSYLGSDGNRNSSYLDNPDERALTMGDLISFAWQISRGMQYLAEMKL-VHRDLAARNVLVAE 162 (290)
T ss_pred ecCCCCHHHHHHhcCCccccccccccccccccccCccccccCHHHHHHHHHHHHHHHHHHHHCCe-ehhhhhhheEEEcC
Confidence 22211 11247888999999999999999999999 99999999999999
Q ss_pred CceEEEeccccchhccccc-------------------------cccccccceeeeeee
Q psy6828 144 RWVVKLADFGLTEFKRDAE-------------------------YTGTDQHSFLQHTYH 177 (392)
Q Consensus 144 ~~~~kl~DFGla~~~~~~~-------------------------~~~~d~~s~g~~~~~ 177 (392)
++.+||+|||+++...... ....|+||||+++|+
T Consensus 163 ~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~~l~e 221 (290)
T cd05045 163 GRKMKISDFGLSRDVYEEDSYVKRSKGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWE 221 (290)
T ss_pred CCcEEeccccccccccCccchhcccCCCCCccccCHHHHccCCcchHhHHHHHHHHHHH
Confidence 9999999999987532110 112388888888887
No 359
>cd05095 PTKc_DDR2 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 2. Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 2 (DDR2) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR2 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR2 binds mostly to fibrillar collagens. More recently, it has been reported to also bind collagen X. DDR2 is widely expressed in many tissues wit
Probab=99.69 E-value=9.2e-17 Score=150.59 Aligned_cols=113 Identities=20% Similarity=0.339 Sum_probs=88.7
Q ss_pred eeeccCCCCCcceeEEEEEEEee----------------cCcEEEEEEcCCCC-hhHHHHHHHHHHH-------------
Q psy6828 45 VSLSSNPDSDFRYSAIFTPIGIY----------------KGRIFAIKRIPKKS-VDITRAMKKELKI------------- 94 (392)
Q Consensus 45 ~~~~~~~lg~G~~g~V~~~~~~~----------------~~~~vAiK~~~~~~-~~~~~~~~~E~~~------------- 94 (392)
.|...+.||+|+||.||++.+.. ++..||+|.+.... ....+.+.+|+.+
T Consensus 6 ~~~~~~~lg~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~~~ 85 (296)
T cd05095 6 RLTFKEKLGEGQFGEVHLCEAEGMEKFMDKDFSLDVSGNQPVLVAVKMLREDANKNARNDFLKEIKIMSRLKDPNIIRLL 85 (296)
T ss_pred hceeeeeccCCCCCeEEecccccccccccccccccCCCCceeEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCcceEE
Confidence 35567789999999999986432 34579999997543 2345677788776
Q ss_pred ----------------------HHhhcCC----------cCCCHHHHHHHHHHHHHHHHHHhcCCcccccCCCCCceEEc
Q psy6828 95 ----------------------DIMENED----------VKLDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLVD 142 (392)
Q Consensus 95 ----------------------~~l~~~~----------~~l~~~~~~~i~~qi~~~l~ylH~~~iiiHrDlKp~NIll~ 142 (392)
+++.... ..+++..+..++.|++.||.|||++++ +||||||+|||++
T Consensus 86 ~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~al~~lH~~~i-~H~dlkp~Nili~ 164 (296)
T cd05095 86 AVCITSDPLCMITEYMENGDLNQFLSRHEPQEAAEKADVVTISYSTLIFMATQIASGMKYLSSLNF-VHRDLATRNCLVG 164 (296)
T ss_pred EEEecCCccEEEEEeCCCCcHHHHHHhcCcccccccccccccCHHHHHHHHHHHHHHHHHHHHCCe-ecccCChheEEEc
Confidence 2222111 136677899999999999999999999 9999999999999
Q ss_pred CCceEEEeccccchhc
Q psy6828 143 SRWVVKLADFGLTEFK 158 (392)
Q Consensus 143 ~~~~~kl~DFGla~~~ 158 (392)
.++.++|+|||+++..
T Consensus 165 ~~~~~~l~dfg~~~~~ 180 (296)
T cd05095 165 KNYTIKIADFGMSRNL 180 (296)
T ss_pred CCCCEEeccCcccccc
Confidence 9999999999998753
No 360
>KOG4257|consensus
Probab=99.69 E-value=2.5e-17 Score=159.18 Aligned_cols=131 Identities=22% Similarity=0.302 Sum_probs=113.0
Q ss_pred eeccCCCCCcceeEEEEEEEeec--Cc--EEEEEEcCCC-ChhHHHHHHHHHHH--------------------------
Q psy6828 46 SLSSNPDSDFRYSAIFTPIGIYK--GR--IFAIKRIPKK-SVDITRAMKKELKI-------------------------- 94 (392)
Q Consensus 46 ~~~~~~lg~G~~g~V~~~~~~~~--~~--~vAiK~~~~~-~~~~~~~~~~E~~~-------------------------- 94 (392)
....+.||+|.||.||.|..... |+ -||||..+.. ....++.|..|..+
T Consensus 391 Itl~r~iG~GqFGdVy~gvYt~~~kge~iaVAvKtCK~d~t~d~tekflqEa~iMrnfdHphIikLIGv~~e~P~WivmE 470 (974)
T KOG4257|consen 391 ITLKRLIGEGQFGDVYKGVYTDPEKGERIAVAVKTCKTDCTPDDTEKFLQEASIMRNFDHPHIIKLIGVCVEQPMWIVME 470 (974)
T ss_pred ccHHHhhcCCcccceeeeEecccccCcceeeeeehhccCCChhhHHHHHHHHHHHHhCCCcchhheeeeeeccceeEEEe
Confidence 34478899999999999985433 33 4899999874 44678899999888
Q ss_pred --------HHhhcCCcCCCHHHHHHHHHHHHHHHHHHhcCCcccccCCCCCceEEcCCceEEEeccccchhccccccc--
Q psy6828 95 --------DIMENEDVKLDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLVDSRWVVKLADFGLTEFKRDAEYT-- 164 (392)
Q Consensus 95 --------~~l~~~~~~l~~~~~~~i~~qi~~~l~ylH~~~iiiHrDlKp~NIll~~~~~~kl~DFGla~~~~~~~~~-- 164 (392)
+|++.....|+......+++||+.||.||||++. +||||...|||+.+...+||+|||+++.+.+....
T Consensus 471 L~~~GELr~yLq~nk~sL~l~tL~ly~~Qi~talaYLeSkrf-VHRDIAaRNiLVsSp~CVKLaDFGLSR~~ed~~yYka 549 (974)
T KOG4257|consen 471 LAPLGELREYLQQNKDSLPLRTLTLYCYQICTALAYLESKRF-VHRDIAARNILVSSPQCVKLADFGLSRYLEDDAYYKA 549 (974)
T ss_pred cccchhHHHHHHhccccchHHHHHHHHHHHHHHHHHHHhhch-hhhhhhhhheeecCcceeeecccchhhhccccchhhc
Confidence 8888877789999999999999999999999999 99999999999999999999999999987665432
Q ss_pred ----------------------cccccceeeeeee
Q psy6828 165 ----------------------GTDQHSFLQHTYH 177 (392)
Q Consensus 165 ----------------------~~d~~s~g~~~~~ 177 (392)
.+|+|-||+.+||
T Consensus 550 S~~kLPIKWmaPESINfRrFTtASDVWMFgVCmWE 584 (974)
T KOG4257|consen 550 SRGKLPIKWMAPESINFRRFTTASDVWMFGVCMWE 584 (974)
T ss_pred cccccceeecCccccchhcccchhhHHHHHHHHHH
Confidence 2399999999999
No 361
>cd07842 STKc_CDK8_like Catalytic domain of Cyclin-Dependent protein Kinase 8-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK8, CDC2L6, and similar proteins. CDK8 functions as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the
Probab=99.69 E-value=7.7e-17 Score=152.22 Aligned_cols=111 Identities=27% Similarity=0.435 Sum_probs=88.7
Q ss_pred ccCCCCCcceeEEEEEEEee--cCcEEEEEEcCCCC---hhHHHHHHHHHHH----------------------------
Q psy6828 48 SSNPDSDFRYSAIFTPIGIY--KGRIFAIKRIPKKS---VDITRAMKKELKI---------------------------- 94 (392)
Q Consensus 48 ~~~~lg~G~~g~V~~~~~~~--~~~~vAiK~~~~~~---~~~~~~~~~E~~~---------------------------- 94 (392)
....+|+|+||.||+|.+.. +++.||+|.+.... ....+.+.+|+.+
T Consensus 4 ~~~~ig~g~~g~v~~~~~~~~~~~~~~alK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~lv~ 83 (316)
T cd07842 4 IEGCIGRGTYGRVYKAKRKNGKDGKEYAIKKFKGDKEQYTGISQSACREIALLRELKHENVVSLVEVFLEHADKSVYLLF 83 (316)
T ss_pred EEEEeccCCcEEEEEEEecCCCCCCeEEEEEeccccccccCccHHHHHHHHHHHhcCCCCccceEEEEeCCCCceEEEEE
Confidence 34569999999999999988 89999999998733 2223445556555
Q ss_pred HH--------hh----cCCcCCCHHHHHHHHHHHHHHHHHHhcCCcccccCCCCCceEEcC----CceEEEeccccchhc
Q psy6828 95 DI--------ME----NEDVKLDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLVDS----RWVVKLADFGLTEFK 158 (392)
Q Consensus 95 ~~--------l~----~~~~~l~~~~~~~i~~qi~~~l~ylH~~~iiiHrDlKp~NIll~~----~~~~kl~DFGla~~~ 158 (392)
++ +. .....+++..+..++.|++.||.|||++++ +||||||+||+++. ++.+||+|||+++..
T Consensus 84 e~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~i-~h~dlkp~Nil~~~~~~~~~~~kl~Dfg~~~~~ 162 (316)
T cd07842 84 DYAEHDLWQIIKFHRQAKRVSIPPSMVKSLLWQILNGVHYLHSNWV-LHRDLKPANILVMGEGPERGVVKIGDLGLARLF 162 (316)
T ss_pred eCCCcCHHHHHHhhccCCCcCcCHHHHHHHHHHHHHHHHHHHhCCE-eeCCCCHHHEEEcCCCCccceEEECCCcccccc
Confidence 11 11 111257889999999999999999999999 99999999999999 899999999998864
Q ss_pred c
Q psy6828 159 R 159 (392)
Q Consensus 159 ~ 159 (392)
.
T Consensus 163 ~ 163 (316)
T cd07842 163 N 163 (316)
T ss_pred C
Confidence 3
No 362
>cd05107 PTKc_PDGFR_beta Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor beta. Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) beta; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR beta is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR beta forms homodimers or heterodimers with PDGFR alpha, depending on the nature of the PDGF ligand. PDGF-BB and PDGF-D
Probab=99.69 E-value=1.5e-16 Score=155.31 Aligned_cols=54 Identities=30% Similarity=0.415 Sum_probs=50.2
Q ss_pred CCHHHHHHHHHHHHHHHHHHhcCCcccccCCCCCceEEcCCceEEEeccccchhc
Q psy6828 104 LDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLVDSRWVVKLADFGLTEFK 158 (392)
Q Consensus 104 l~~~~~~~i~~qi~~~l~ylH~~~iiiHrDlKp~NIll~~~~~~kl~DFGla~~~ 158 (392)
+++..+..++.|++.||.|||+.++ +||||||+|||++.++.+||+|||+++..
T Consensus 236 l~~~~~~~~~~qi~~aL~~LH~~~i-vHrdlkp~NiLl~~~~~~kL~DfGla~~~ 289 (401)
T cd05107 236 LSYMDLVGFSYQVANGMEFLASKNC-VHRDLAARNVLICEGKLVKICDFGLARDI 289 (401)
T ss_pred CCHHHHHHHHHHHHHHHHHHhcCCc-CcccCCcceEEEeCCCEEEEEecCcceec
Confidence 5677788899999999999999999 99999999999999999999999998754
No 363
>cd07835 STKc_CDK1_like Catalytic domain of Cyclin-Dependent protein Kinase 1-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes, plants, and yeasts, as well as CDK2 and CDK3. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyc
Probab=99.69 E-value=5.3e-17 Score=150.97 Aligned_cols=109 Identities=27% Similarity=0.438 Sum_probs=89.1
Q ss_pred cCCCCCcceeEEEEEEEeecCcEEEEEEcCCCCh--hHHHHHHHHHHH--------------------------------
Q psy6828 49 SNPDSDFRYSAIFTPIGIYKGRIFAIKRIPKKSV--DITRAMKKELKI-------------------------------- 94 (392)
Q Consensus 49 ~~~lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~~--~~~~~~~~E~~~-------------------------------- 94 (392)
.+.+|+|++|.||++.+..+|+.||+|++..... ...+.+.+|+..
T Consensus 4 ~~~l~~g~~~~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~E~~~l~~l~~~~iv~~~~~~~~~~~~~iv~e~~~~~ 83 (283)
T cd07835 4 VEKIGEGTYGVVYKARDKLTGEIVALKKIRLETEDEGVPSTAIREISLLKELNHPNIVRLLDVVHSENKLYLVFEFLDLD 83 (283)
T ss_pred heEecCCCCeEEEEEEEcCCCCEEEEEEeecccccccchhHHHHHHHHHHhcCCCCccCHhheeccCCeEEEEEeccCcC
Confidence 4568999999999999999999999999875432 222445666655
Q ss_pred --HHhhc-CCcCCCHHHHHHHHHHHHHHHHHHhcCCcccccCCCCCceEEcCCceEEEeccccchhc
Q psy6828 95 --DIMEN-EDVKLDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLVDSRWVVKLADFGLTEFK 158 (392)
Q Consensus 95 --~~l~~-~~~~l~~~~~~~i~~qi~~~l~ylH~~~iiiHrDlKp~NIll~~~~~~kl~DFGla~~~ 158 (392)
+++.. ....+++..+..++.|++.||.|||++++ +||||+|+||+++.++.++|+|||++...
T Consensus 84 l~~~~~~~~~~~~~~~~~~~~~~~i~~~L~~lH~~~~-~H~dl~p~nil~~~~~~~~l~df~~~~~~ 149 (283)
T cd07835 84 LKKYMDSSPLTGLDPPLIKSYLYQLLQGIAYCHSHRV-LHRDLKPQNLLIDREGALKLADFGLARAF 149 (283)
T ss_pred HHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCe-eCCCCCHHHEEEcCCCcEEEeeccccccc
Confidence 22222 21258999999999999999999999999 99999999999999999999999998754
No 364
>cd06636 STKc_MAP4K4_6 Catalytic domain of the Protein Serine/Threonine Kinases, Mitogen-Activated Protein Kinase Kinase Kinase Kinase 4 and 6. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 4 (MAPKKKK4 or MAP4K4) and MAPKKKK6 (or MAP4K6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K4/MAP4K6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain. MAP4Ks (or MAPKKKKs) are involved in MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Ea
Probab=99.69 E-value=8.8e-17 Score=149.47 Aligned_cols=113 Identities=25% Similarity=0.375 Sum_probs=89.0
Q ss_pred eeeeccCCCCCcceeEEEEEEEeecCcEEEEEEcCCCChhHHHHHHHHHHH-----------------------------
Q psy6828 44 QVSLSSNPDSDFRYSAIFTPIGIYKGRIFAIKRIPKKSVDITRAMKKELKI----------------------------- 94 (392)
Q Consensus 44 ~~~~~~~~lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~~~~~~~~~~E~~~----------------------------- 94 (392)
..|...+.+|+|+||.||++.+..+++.||+|.+..... ....+..|+.+
T Consensus 16 ~~~~~~~~lg~g~~~~v~~~~~~~~~~~~a~K~~~~~~~-~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~~~~~~~~ 94 (282)
T cd06636 16 GIFELVEVVGNGTYGQVYKGRHVKTGQLAAIKVMDVTED-EEEEIKLEINMLKKYSHHRNIATYYGAFIKKSPPGHDDQL 94 (282)
T ss_pred hhhhhheeeccCCCeEEEEEEEcCCCcEEEEEEEecChH-HHHHHHHHHHHHHHhcCCCcEEEEeeehhcccccCCCCEE
Confidence 344556789999999999999999999999999865432 22334444443
Q ss_pred -------------HHhhc-CCcCCCHHHHHHHHHHHHHHHHHHhcCCcccccCCCCCceEEcCCceEEEeccccchhc
Q psy6828 95 -------------DIMEN-EDVKLDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLVDSRWVVKLADFGLTEFK 158 (392)
Q Consensus 95 -------------~~l~~-~~~~l~~~~~~~i~~qi~~~l~ylH~~~iiiHrDlKp~NIll~~~~~~kl~DFGla~~~ 158 (392)
+++.. ....+++..+..++.|++.||.|||+.++ +||||||+||+++.++.++|+|||++...
T Consensus 95 ~iv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~qi~~al~~LH~~~i-vH~dl~~~nili~~~~~~~l~dfg~~~~~ 171 (282)
T cd06636 95 WLVMEFCGAGSVTDLVKNTKGNALKEDWIAYICREILRGLAHLHAHKV-IHRDIKGQNVLLTENAEVKLVDFGVSAQL 171 (282)
T ss_pred EEEEEeCCCCcHHHHHHHccCCCCCHHHHHHHHHHHHHHHHHHHHCCc-ccCCCCHHHEEECCCCCEEEeeCcchhhh
Confidence 11111 12247888899999999999999999999 99999999999999999999999998643
No 365
>cd05100 PTKc_FGFR3 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 3. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 3 (FGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR3 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=99.69 E-value=1.8e-16 Score=151.30 Aligned_cols=113 Identities=22% Similarity=0.267 Sum_probs=87.8
Q ss_pred eeeccCCCCCcceeEEEEEEEeec-------CcEEEEEEcCCCCh-hHHHHHHHHHHH----------------------
Q psy6828 45 VSLSSNPDSDFRYSAIFTPIGIYK-------GRIFAIKRIPKKSV-DITRAMKKELKI---------------------- 94 (392)
Q Consensus 45 ~~~~~~~lg~G~~g~V~~~~~~~~-------~~~vAiK~~~~~~~-~~~~~~~~E~~~---------------------- 94 (392)
.+...+.||+|+||.||++.+... +..||+|.+..... ...+.+.+|+.+
T Consensus 13 ~~~i~~~ig~G~~g~v~~~~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~ 92 (334)
T cd05100 13 RLTLGKPLGEGCFGQVVMAEAIGIDKDKPNKPVTVAVKMLKDDATDKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGP 92 (334)
T ss_pred HeeecceeccccCCcEEEEEEeccCCccCCcceeEEEEEcccccCHHHHHHHHHHHHHHHhhcCCCCeeeeeEEEccCCc
Confidence 455678899999999999986532 23699998875432 334556666665
Q ss_pred --------------HHhhcC---------------CcCCCHHHHHHHHHHHHHHHHHHhcCCcccccCCCCCceEEcCCc
Q psy6828 95 --------------DIMENE---------------DVKLDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLVDSRW 145 (392)
Q Consensus 95 --------------~~l~~~---------------~~~l~~~~~~~i~~qi~~~l~ylH~~~iiiHrDlKp~NIll~~~~ 145 (392)
+++... ...+++.++..++.|++.||.|||++++ +||||||+||+++.++
T Consensus 93 ~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~~LH~~gi-vH~dlkp~Nill~~~~ 171 (334)
T cd05100 93 LYVLVEYASKGNLREYLRARRPPGMDYSFDTCKLPEEQLTFKDLVSCAYQVARGMEYLASQKC-IHRDLAARNVLVTEDN 171 (334)
T ss_pred eEEEEecCCCCcHHHHHHhcCCcccccccccccCccccCCHHHHHHHHHHHHHHHHHHHHCCe-eccccccceEEEcCCC
Confidence 222211 1247778889999999999999999999 9999999999999999
Q ss_pred eEEEeccccchhc
Q psy6828 146 VVKLADFGLTEFK 158 (392)
Q Consensus 146 ~~kl~DFGla~~~ 158 (392)
.+||+|||+++..
T Consensus 172 ~~kL~Dfg~~~~~ 184 (334)
T cd05100 172 VMKIADFGLARDV 184 (334)
T ss_pred cEEECCcccceec
Confidence 9999999998754
No 366
>PHA03210 serine/threonine kinase US3; Provisional
Probab=99.69 E-value=3.1e-17 Score=164.92 Aligned_cols=115 Identities=17% Similarity=0.142 Sum_probs=80.9
Q ss_pred eeeeccCCCCCcceeEEEEEEEeecC-cEEEEEEcC--------------C---CChhHHHHHHHHHHH-----------
Q psy6828 44 QVSLSSNPDSDFRYSAIFTPIGIYKG-RIFAIKRIP--------------K---KSVDITRAMKKELKI----------- 94 (392)
Q Consensus 44 ~~~~~~~~lg~G~~g~V~~~~~~~~~-~~vAiK~~~--------------~---~~~~~~~~~~~E~~~----------- 94 (392)
..|...+.||+|+||+||+|..+... ...+.|.+. + ........+.+|+.+
T Consensus 148 ~~Y~ii~~LG~G~fG~Vyl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~Ei~il~~l~HpnIv~ 227 (501)
T PHA03210 148 AHFRVIDDLPAGAFGKIFICALRASTEEAEARRGVNSTNQGKPKCERLIAKRVKAGSRAAIQLENEILALGRLNHENILK 227 (501)
T ss_pred hccEEEeEecCCCCcceEEEEEeccchhhhhhhccccccccchhhhhhHhHHhhcchHHHHHHHHHHHHHHhCCCCCcCc
Confidence 45666789999999999998765432 222222111 0 111233456777776
Q ss_pred -----------------------HHhhcCC----cCCCHHHHHHHHHHHHHHHHHHhcCCcccccCCCCCceEEcCCceE
Q psy6828 95 -----------------------DIMENED----VKLDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLVDSRWVV 147 (392)
Q Consensus 95 -----------------------~~l~~~~----~~l~~~~~~~i~~qi~~~l~ylH~~~iiiHrDlKp~NIll~~~~~~ 147 (392)
+++.... ......++..++.|++.||.|||++++ +||||||+|||++.++.+
T Consensus 228 l~~~~~~~~~~~lv~e~~~~~l~~~l~~~~~~~~~~~~~~~~~~i~~ql~~aL~yLH~~gI-iHrDLKP~NILl~~~~~v 306 (501)
T PHA03210 228 IEEILRSEANTYMITQKYDFDLYSFMYDEAFDWKDRPLLKQTRAIMKQLLCAVEYIHDKKL-IHRDIKLENIFLNCDGKI 306 (501)
T ss_pred EeEEEEECCeeEEEEeccccCHHHHHhhccccccccccHHHHHHHHHHHHHHHHHHHhCCe-ecCCCCHHHEEECCCCCE
Confidence 1111111 123356678899999999999999999 999999999999999999
Q ss_pred EEeccccchhcc
Q psy6828 148 KLADFGLTEFKR 159 (392)
Q Consensus 148 kl~DFGla~~~~ 159 (392)
||+|||+++...
T Consensus 307 kL~DFGla~~~~ 318 (501)
T PHA03210 307 VLGDFGTAMPFE 318 (501)
T ss_pred EEEeCCCceecC
Confidence 999999997653
No 367
>cd05055 PTKc_PDGFR Catalytic domain of the Protein Tyrosine Kinases, Platelet Derived Growth Factor Receptors. Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) subfamily; catalytic (c) domain. The PDGFR subfamily consists of PDGFR alpha, PDGFR beta, KIT, CSF-1R, the mammalian FLT3, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. PDGFR kinase domains are autoinhibited by their juxtamembrane regions containing tyr residues. The binding to their ligands leads to recept
Probab=99.69 E-value=1.4e-16 Score=149.95 Aligned_cols=113 Identities=20% Similarity=0.227 Sum_probs=90.8
Q ss_pred eeeccCCCCCcceeEEEEEEEe-----ecCcEEEEEEcCCCCh-hHHHHHHHHHHH------------------------
Q psy6828 45 VSLSSNPDSDFRYSAIFTPIGI-----YKGRIFAIKRIPKKSV-DITRAMKKELKI------------------------ 94 (392)
Q Consensus 45 ~~~~~~~lg~G~~g~V~~~~~~-----~~~~~vAiK~~~~~~~-~~~~~~~~E~~~------------------------ 94 (392)
.+...+.+|+|+||.||++.+. .++..||+|.++.... ...+.+.+|+.+
T Consensus 36 ~~~~~~~ig~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~ 115 (302)
T cd05055 36 NLSFGKTLGAGAFGKVVEATAYGLSKSDAVMKVAVKMLKPTAHSSEREALMSELKIMSHLGNHENIVNLLGACTIGGPIL 115 (302)
T ss_pred HeEEcceeeccCCeeEEEEEEecCCCCCceeEEEEEecCccCChHHHHHHHHHHHHHHhccCCCCcceEEEEEecCCceE
Confidence 4556788999999999999753 3456899999876532 344567777766
Q ss_pred ------------HHhhc-CCcCCCHHHHHHHHHHHHHHHHHHhcCCcccccCCCCCceEEcCCceEEEeccccchhc
Q psy6828 95 ------------DIMEN-EDVKLDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLVDSRWVVKLADFGLTEFK 158 (392)
Q Consensus 95 ------------~~l~~-~~~~l~~~~~~~i~~qi~~~l~ylH~~~iiiHrDlKp~NIll~~~~~~kl~DFGla~~~ 158 (392)
+++.. ....+++.++..++.|++.||.|||++++ +|+||||+|||++.++.+|++|||+++..
T Consensus 116 lv~e~~~~~~L~~~i~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~i-vH~dlkp~Nil~~~~~~~~l~dfg~~~~~ 191 (302)
T cd05055 116 VITEYCCYGDLLNFLRRKRESFLTLEDLLSFSYQVAKGMAFLASKNC-IHRDLAARNVLLTHGKIVKICDFGLARDI 191 (302)
T ss_pred EEEEcCCCCcHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCe-ehhhhccceEEEcCCCeEEECCCcccccc
Confidence 33322 22238999999999999999999999999 99999999999999999999999998754
No 368
>cd06608 STKc_myosinIII_like Catalytic domain of Class III myosin-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), Class III myosin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins with an N-terminal kinase catalytic domain and a C-terminal actin-binding motor domain. Class III myosins are present in the photoreceptors of invertebrates and vertebrates and in the auditory hair cells of mammals. The kinase domain of myosin III can phosphorylate several cytoskeletal proteins, conventional myosin regulatory light chains, and can autophosphorylate the C-terminal motor domain. Myosin I
Probab=99.69 E-value=9.4e-17 Score=148.17 Aligned_cols=113 Identities=25% Similarity=0.401 Sum_probs=91.8
Q ss_pred eeeeccCCCCCcceeEEEEEEEeecCcEEEEEEcCCCChhHHHHHHHHHHH-----------------------------
Q psy6828 44 QVSLSSNPDSDFRYSAIFTPIGIYKGRIFAIKRIPKKSVDITRAMKKELKI----------------------------- 94 (392)
Q Consensus 44 ~~~~~~~~lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~~~~~~~~~~E~~~----------------------------- 94 (392)
..|...+.+|+|+||.||++.+..+++.|++|.+..... ..+.+.+|+.+
T Consensus 6 ~~y~~~~~l~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~-~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~~~~~~~~ 84 (275)
T cd06608 6 GIFELVEVIGEGTYGKVYKARHKKTGQLVAIKIMDIIED-EEEEIKEEYNILRKYSNHPNIATFYGAFIKKNPPGNDDQL 84 (275)
T ss_pred hheeheeeecCCCCeEEEEEEECCCCcEEEEEEEecCch-hHHHHHHHHHHHHHhcCCCChheEEEEEEecCCCCcceEE
Confidence 456667889999999999999988999999999876543 23456666554
Q ss_pred -------------HHhhc---CCcCCCHHHHHHHHHHHHHHHHHHhcCCcccccCCCCCceEEcCCceEEEeccccchhc
Q psy6828 95 -------------DIMEN---EDVKLDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLVDSRWVVKLADFGLTEFK 158 (392)
Q Consensus 95 -------------~~l~~---~~~~l~~~~~~~i~~qi~~~l~ylH~~~iiiHrDlKp~NIll~~~~~~kl~DFGla~~~ 158 (392)
+++.. .+..+++..+..++.|++.||.|||++++ +|+||+|+||+++.++.+||+|||++...
T Consensus 85 ~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~ql~~al~~lH~~~i-~H~~l~p~ni~~~~~~~~~l~d~~~~~~~ 163 (275)
T cd06608 85 WLVMELCGGGSVTDLVKGLRKKGKRLKEEWIAYILRETLRGLAYLHENKV-IHRDIKGQNILLTKNAEVKLVDFGVSAQL 163 (275)
T ss_pred EEEEEcCCCCcHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHhcCCc-ccCCCCHHHEEEccCCeEEECCCccceec
Confidence 11111 12368889999999999999999999999 99999999999999999999999987643
No 369
>cd05061 PTKc_InsR Catalytic domain of the Protein Tyrosine Kinase, Insulin Receptor. Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR is a receptor tyr kinase (RTK) that is composed of two alphabeta heterodimers. Binding of the insulin ligand to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological function. InsR signaling plays an important role in many cellular processes including glucose homeostasis, glycogen synthesis, lipid and protein meta
Probab=99.69 E-value=1.5e-16 Score=148.49 Aligned_cols=113 Identities=19% Similarity=0.248 Sum_probs=87.1
Q ss_pred eeeccCCCCCcceeEEEEEEEee-----cCcEEEEEEcCCCCh-hHHHHHHHHHHH------------------------
Q psy6828 45 VSLSSNPDSDFRYSAIFTPIGIY-----KGRIFAIKRIPKKSV-DITRAMKKELKI------------------------ 94 (392)
Q Consensus 45 ~~~~~~~lg~G~~g~V~~~~~~~-----~~~~vAiK~~~~~~~-~~~~~~~~E~~~------------------------ 94 (392)
.|...+.||+|+||.||+|..+. .+..||+|.++.... .....+.+|+.+
T Consensus 7 ~~~i~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~l 86 (288)
T cd05061 7 KITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVRLLGVVSKGQPTLV 86 (288)
T ss_pred HceeeeeecCCCCcEEEEEEEeccCCCCcceEEEEEECCCcCCHHHHHHHHHHHHHHHhCCCCCeeeEEEEEcCCCCcEE
Confidence 45556789999999999997653 345899999875432 333456667655
Q ss_pred -----------HHhhcC---------CcCCCHHHHHHHHHHHHHHHHHHhcCCcccccCCCCCceEEcCCceEEEecccc
Q psy6828 95 -----------DIMENE---------DVKLDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLVDSRWVVKLADFGL 154 (392)
Q Consensus 95 -----------~~l~~~---------~~~l~~~~~~~i~~qi~~~l~ylH~~~iiiHrDlKp~NIll~~~~~~kl~DFGl 154 (392)
+++... ...++...+..++.|++.||.|||++++ +||||||+||+++.++.+||+|||+
T Consensus 87 v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~i-~H~dikp~nili~~~~~~~L~Dfg~ 165 (288)
T cd05061 87 VMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMAYLNAKKF-VHRDLAARNCMVAHDFTVKIGDFGM 165 (288)
T ss_pred EEeCCCCCCHHHHHHHhccccccCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCC-cCCCCChheEEEcCCCcEEECcCCc
Confidence 233211 1134567788999999999999999999 9999999999999999999999999
Q ss_pred chhc
Q psy6828 155 TEFK 158 (392)
Q Consensus 155 a~~~ 158 (392)
++..
T Consensus 166 ~~~~ 169 (288)
T cd05061 166 TRDI 169 (288)
T ss_pred cccc
Confidence 8743
No 370
>cd05043 PTK_Ryk Pseudokinase domain of Ryk (Receptor related to tyrosine kinase). Protein Tyrosine Kinase (PTK) family; Receptor related to tyrosine kinase (Ryk); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ryk is a receptor tyr kinase (RTK) containing an extracellular region with two leucine-rich motifs, a transmembrane segment, and an intracellular inactive pseudokinase domain. The extracellular region of Ryk shows homology to the N-terminal domain of Wnt inhibitory factor-1 (WIF) and serves as the ligand (Wnt) binding domain of Ryk. Ryk is expressed in many different tissues both during development and in adults, suggesting a widespread function. It
Probab=99.69 E-value=1.6e-16 Score=147.58 Aligned_cols=113 Identities=21% Similarity=0.254 Sum_probs=91.4
Q ss_pred eeeccCCCCCcceeEEEEEEEee----cCcEEEEEEcCCCC-hhHHHHHHHHHHH-------------------------
Q psy6828 45 VSLSSNPDSDFRYSAIFTPIGIY----KGRIFAIKRIPKKS-VDITRAMKKELKI------------------------- 94 (392)
Q Consensus 45 ~~~~~~~lg~G~~g~V~~~~~~~----~~~~vAiK~~~~~~-~~~~~~~~~E~~~------------------------- 94 (392)
.|...+.+|+|+||.||+|.+.. ++..|++|.+.... ....+.+.+|..+
T Consensus 7 ~~~~~~~i~~g~~g~V~~~~~~~~~~~~~~~v~~k~~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~~~ 86 (280)
T cd05043 7 RVTLSDLLQEGTFGRIFYGILIDEKPGKEEEVFVKTVKDHASEIQVTLLLQESCLLYGLSHQNILPILHVCIEDGEPPFV 86 (280)
T ss_pred heEEeeeecccCCceEEEEEEecCCCCceeEEEEEEccCCCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEecCCCCCEE
Confidence 34556779999999999999876 35789999987542 3445667777665
Q ss_pred -----------HHhhcCC-------cCCCHHHHHHHHHHHHHHHHHHhcCCcccccCCCCCceEEcCCceEEEeccccch
Q psy6828 95 -----------DIMENED-------VKLDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLVDSRWVVKLADFGLTE 156 (392)
Q Consensus 95 -----------~~l~~~~-------~~l~~~~~~~i~~qi~~~l~ylH~~~iiiHrDlKp~NIll~~~~~~kl~DFGla~ 156 (392)
+++.... ..+++..+..++.|++.||.|||++++ +||||||+||+++.++.+|++|||+++
T Consensus 87 ~~~~~~~~~L~~~l~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~i-~H~di~p~nil~~~~~~~kl~d~g~~~ 165 (280)
T cd05043 87 LYPYMNWGNLKLFLQQCRLGEANNPQALSTQQLVHMAIQIACGMSYLHKRGV-IHKDIAARNCVIDEELQVKITDNALSR 165 (280)
T ss_pred EEEcCCCCcHHHHHHhccccccccccCCCHHHHHHHHHHHHHHHHHHHHCCE-eecccCHhhEEEcCCCcEEECCCCCcc
Confidence 3332211 358899999999999999999999999 999999999999999999999999997
Q ss_pred hc
Q psy6828 157 FK 158 (392)
Q Consensus 157 ~~ 158 (392)
..
T Consensus 166 ~~ 167 (280)
T cd05043 166 DL 167 (280)
T ss_pred cc
Confidence 54
No 371
>cd06638 STKc_myosinIIIA Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIA myosin. Serine/threonine kinases (STKs), class IIIA myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. In photoreceptor cells, they may also function as cargo carriers during light-dependent translocation of proteins such as transducin and arrestin. Class IIIA myosin is highly expressed in retina and in inner ear
Probab=99.69 E-value=9.3e-17 Score=149.51 Aligned_cols=113 Identities=21% Similarity=0.299 Sum_probs=88.7
Q ss_pred eeeeccCCCCCcceeEEEEEEEeecCcEEEEEEcCCCChhHHHHHHHHHHH-----------------------------
Q psy6828 44 QVSLSSNPDSDFRYSAIFTPIGIYKGRIFAIKRIPKKSVDITRAMKKELKI----------------------------- 94 (392)
Q Consensus 44 ~~~~~~~~lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~~~~~~~~~~E~~~----------------------------- 94 (392)
..|...+.||+|+||.||++.+..+++.||+|.+..... ..+.+.+|+.+
T Consensus 18 ~~~~~~~~lg~g~~~~vy~~~~~~~~~~~~ik~~~~~~~-~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~~~~~~~~~~~ 96 (286)
T cd06638 18 DTWEIIETIGKGTYGKVFKVLNKKNGSKAAVKILDPIHD-IDEEIEAEYNILKALSDHPNVVKFYGMYYKKDVKNGDQLW 96 (286)
T ss_pred cceeeeeeeccCCCcEEEEEEECCCCceeEEEeeccccc-hHHHHHHHHHHHHHHhcCCCeeeeeeeeeecccCCCCeEE
Confidence 344556789999999999999999999999999865322 12334444433
Q ss_pred ---HHhhc------------CCcCCCHHHHHHHHHHHHHHHHHHhcCCcccccCCCCCceEEcCCceEEEeccccchhc
Q psy6828 95 ---DIMEN------------EDVKLDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLVDSRWVVKLADFGLTEFK 158 (392)
Q Consensus 95 ---~~l~~------------~~~~l~~~~~~~i~~qi~~~l~ylH~~~iiiHrDlKp~NIll~~~~~~kl~DFGla~~~ 158 (392)
+++.. ....+++..+..++.|++.||.|||++++ +||||||+||+++.++.+||+|||+++..
T Consensus 97 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i-~H~dlkp~nili~~~~~~kl~dfg~~~~~ 174 (286)
T cd06638 97 LVLELCNGGSVTDLVKGFLKRGERMEEPIIAYILHEALMGLQHLHVNKT-IHRDVKGNNILLTTEGGVKLVDFGVSAQL 174 (286)
T ss_pred EEEeecCCCCHHHHHHHhhccCccccHHHHHHHHHHHHHHHHHHHhCCc-cccCCCHHhEEECCCCCEEEccCCceeec
Confidence 11111 12257888899999999999999999999 99999999999999999999999998754
No 372
>cd06639 STKc_myosinIIIB Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIB myosin. Serine/threonine kinases (STKs), class IIIB myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. They may also function as cargo carriers during light-dependent translocation, in photoreceptor cells, of proteins such as transducin and arrestin. Class IIIB myosin is expressed highly in retina. It is also pre
Probab=99.69 E-value=8.5e-17 Score=150.32 Aligned_cols=112 Identities=21% Similarity=0.317 Sum_probs=88.8
Q ss_pred eeeccCCCCCcceeEEEEEEEeecCcEEEEEEcCCCChhHHHHHHHHHHH------------------------------
Q psy6828 45 VSLSSNPDSDFRYSAIFTPIGIYKGRIFAIKRIPKKSVDITRAMKKELKI------------------------------ 94 (392)
Q Consensus 45 ~~~~~~~lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~~~~~~~~~~E~~~------------------------------ 94 (392)
.|.....+|+|+||.||++.+..+++.+|+|.+..... ....+.+|+.+
T Consensus 23 ~y~~~~~l~~g~~~~vy~~~~~~~~~~~aik~~~~~~~-~~~~~~~e~~~l~~l~~h~ni~~~~~~~~~~~~~~~~~~~l 101 (291)
T cd06639 23 TWEIIETIGKGTYGKVYKVTNKKDGSLAAVKILDPISD-VDEEIEAEYNILQSLPNHPNVVKFYGMFYKADKLVGGQLWL 101 (291)
T ss_pred CeEEEEEeecCCCeEEEEEEECCCCCEEEEEEeccccc-HHHHHHHHHHHHHHhcCCCCeEEEEEEEEeccccCCCeeEE
Confidence 34455679999999999999999999999999975432 12333444433
Q ss_pred -----------HHhh---cCCcCCCHHHHHHHHHHHHHHHHHHhcCCcccccCCCCCceEEcCCceEEEeccccchhc
Q psy6828 95 -----------DIME---NEDVKLDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLVDSRWVVKLADFGLTEFK 158 (392)
Q Consensus 95 -----------~~l~---~~~~~l~~~~~~~i~~qi~~~l~ylH~~~iiiHrDlKp~NIll~~~~~~kl~DFGla~~~ 158 (392)
++++ .....+++..+..++.|++.||.|||++++ +||||||+||+++.++.+||+|||++...
T Consensus 102 v~ey~~~~sL~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~i-vH~dlkp~nili~~~~~~kl~dfg~~~~~ 178 (291)
T cd06639 102 VLELCNGGSVTELVKGLLICGQRLDEAMISYILYGALLGLQHLHNNRI-IHRDVKGNNILLTTEGGVKLVDFGVSAQL 178 (291)
T ss_pred EEEECCCCcHHHHHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhCCe-eccCCCHHHEEEcCCCCEEEeecccchhc
Confidence 1111 122358899999999999999999999999 99999999999999999999999998754
No 373
>cd05099 PTKc_FGFR4 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 4. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 4 (FGFR4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR4 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=99.68 E-value=1.8e-16 Score=149.92 Aligned_cols=114 Identities=21% Similarity=0.282 Sum_probs=89.3
Q ss_pred eeeeccCCCCCcceeEEEEEEEee-------cCcEEEEEEcCCCCh-hHHHHHHHHHHH---------------------
Q psy6828 44 QVSLSSNPDSDFRYSAIFTPIGIY-------KGRIFAIKRIPKKSV-DITRAMKKELKI--------------------- 94 (392)
Q Consensus 44 ~~~~~~~~lg~G~~g~V~~~~~~~-------~~~~vAiK~~~~~~~-~~~~~~~~E~~~--------------------- 94 (392)
..+...+.+|+|+||.||++.+.. ....+|+|.+..... .....+.+|+.+
T Consensus 12 ~~~~~~~~lg~G~~g~vy~~~~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~ 91 (314)
T cd05099 12 DRLVLGKPLGEGCFGQVVRAEAYGIDKSRPDQTVTVAVKMLKDNATDKDLADLISEMELMKLIGKHKNIINLLGVCTQEG 91 (314)
T ss_pred HHeeeeeeecCCCcccEEEeeecccCCccCCcceEEEEEecCCCCChHHHHHHHHHHHHHHhccCCCCeeeEEEEEccCC
Confidence 345567889999999999998642 345799999875432 334556677655
Q ss_pred ---------------HHhhcC---------------CcCCCHHHHHHHHHHHHHHHHHHhcCCcccccCCCCCceEEcCC
Q psy6828 95 ---------------DIMENE---------------DVKLDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLVDSR 144 (392)
Q Consensus 95 ---------------~~l~~~---------------~~~l~~~~~~~i~~qi~~~l~ylH~~~iiiHrDlKp~NIll~~~ 144 (392)
+++... ...+++.++..++.|++.||.|||++++ +||||||+|||++.+
T Consensus 92 ~~~lv~e~~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~lH~~gi-~H~dlkp~Nill~~~ 170 (314)
T cd05099 92 PLYVIVEYAAKGNLREFLRARRPPGPDYTFDITKVPEEQLSFKDLVSCAYQVARGMEYLESRRC-IHRDLAARNVLVTED 170 (314)
T ss_pred ceEEEEecCCCCcHHHHHHhcCCCcccccccccCCcccccCHHHHHHHHHHHHHHHHHHHHCCe-eeccccceeEEEcCC
Confidence 222211 1247888999999999999999999999 999999999999999
Q ss_pred ceEEEeccccchhc
Q psy6828 145 WVVKLADFGLTEFK 158 (392)
Q Consensus 145 ~~~kl~DFGla~~~ 158 (392)
+.+||+|||+++..
T Consensus 171 ~~~kL~Dfg~~~~~ 184 (314)
T cd05099 171 NVMKIADFGLARGV 184 (314)
T ss_pred CcEEEccccccccc
Confidence 99999999999754
No 374
>cd06614 STKc_PAK Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase. Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAK deregulation is associated with tumor development. PAKs from higher eukaryotes are classified into two grou
Probab=99.68 E-value=1.1e-16 Score=149.06 Aligned_cols=114 Identities=24% Similarity=0.369 Sum_probs=95.0
Q ss_pred ceeeeccCCCCCcceeEEEEEEEeecCcEEEEEEcCCCChhHHHHHHHHHHH----------------------------
Q psy6828 43 SQVSLSSNPDSDFRYSAIFTPIGIYKGRIFAIKRIPKKSVDITRAMKKELKI---------------------------- 94 (392)
Q Consensus 43 ~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~~~~~~~~~~E~~~---------------------------- 94 (392)
...|.....+|+|+||.||.+.+..+++.|++|.+..... ..+.+.+|+..
T Consensus 18 ~~~~~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~-~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~ 96 (286)
T cd06614 18 RELYKNLEKIGEGASGEVYKATDRATGKEVAIKKMRLRKQ-NKELIINEILIMKDCKHPNIVDYYDSYLVGDELWVVMEY 96 (286)
T ss_pred cccchHhHhccCCCCeEEEEEEEccCCcEEEEEEEecCch-hHHHHHHHHHHHHHCCCCCeeEEEEEEEECCEEEEEEec
Confidence 3445566789999999999999988999999999976544 44566777665
Q ss_pred -------HHhhcCCcCCCHHHHHHHHHHHHHHHHHHhcCCcccccCCCCCceEEcCCceEEEeccccchhc
Q psy6828 95 -------DIMENEDVKLDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLVDSRWVVKLADFGLTEFK 158 (392)
Q Consensus 95 -------~~l~~~~~~l~~~~~~~i~~qi~~~l~ylH~~~iiiHrDlKp~NIll~~~~~~kl~DFGla~~~ 158 (392)
+++......+++..+..++.|++.||.|||+.++ +|+||||+||+++.++.++|+|||++...
T Consensus 97 ~~~~~L~~~l~~~~~~l~~~~~~~i~~~i~~~L~~lH~~gi-~H~dl~p~ni~i~~~~~~~l~d~~~~~~~ 166 (286)
T cd06614 97 MDGGSLTDIITQNFVRMNEPQIAYVCREVLQGLEYLHSQNV-IHRDIKSDNILLSKDGSVKLADFGFAAQL 166 (286)
T ss_pred cCCCcHHHHHHHhccCCCHHHHHHHHHHHHHHHHHHHhCCe-eeCCCChhhEEEcCCCCEEECccchhhhh
Confidence 3333333368999999999999999999999999 99999999999999999999999987654
No 375
>cd05036 PTKc_ALK_LTK Catalytic domain of the Protein Tyrosine Kinases, Anaplastic Lymphoma Kinase and Leukocyte Tyrosine Kinase. Protein Tyrosine Kinase (PTK) family; Anaplastic Lymphoma Kinase (ALK) and Leukocyte Tyrosine (tyr) Kinase (LTK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyr residues in protein substrates. ALK and LTK are orphan receptor tyr kinases (RTKs) whose ligands are not yet well-defined. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. They are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. ALK appears to play an important role in mammalian neural development as well
Probab=99.68 E-value=1.7e-16 Score=147.24 Aligned_cols=112 Identities=19% Similarity=0.260 Sum_probs=89.3
Q ss_pred eeccCCCCCcceeEEEEEEEee-----cCcEEEEEEcCCCCh-hHHHHHHHHHHH-------------------------
Q psy6828 46 SLSSNPDSDFRYSAIFTPIGIY-----KGRIFAIKRIPKKSV-DITRAMKKELKI------------------------- 94 (392)
Q Consensus 46 ~~~~~~lg~G~~g~V~~~~~~~-----~~~~vAiK~~~~~~~-~~~~~~~~E~~~------------------------- 94 (392)
+...+.||+|+||.||++.+.. ++..||+|.+..... .....+.+|+.+
T Consensus 8 ~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv 87 (277)
T cd05036 8 ITLLRALGHGAFGEVYEGLYRGRDGDAVELQVAVKTLPESCSEQDESDFLMEALIMSKFNHQNIVRLIGVSFERLPRFIL 87 (277)
T ss_pred cEeeeECCCCCCCcEEEEEEecCCCCCCceeEEEEEcCCCCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEccCCCcEEE
Confidence 4456789999999999999877 778999999875433 333457777665
Q ss_pred ----------HHhhcCC------cCCCHHHHHHHHHHHHHHHHHHhcCCcccccCCCCCceEEcCCc---eEEEeccccc
Q psy6828 95 ----------DIMENED------VKLDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLVDSRW---VVKLADFGLT 155 (392)
Q Consensus 95 ----------~~l~~~~------~~l~~~~~~~i~~qi~~~l~ylH~~~iiiHrDlKp~NIll~~~~---~~kl~DFGla 155 (392)
+++.... ..+++..+..++.||+.||.|||++++ +||||||+||+++.++ .+||+|||++
T Consensus 88 ~e~~~g~~L~~~i~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~i-vH~dlkp~nil~~~~~~~~~~kl~dfg~~ 166 (277)
T cd05036 88 LELMAGGDLKSFLRENRPRPERPSSLTMKDLLFCARDVAKGCKYLEENHF-IHRDIAARNCLLTCKGPGRVAKIADFGMA 166 (277)
T ss_pred EecCCCCCHHHHHHHhCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCE-eecccchheEEEeccCCCcceEeccCccc
Confidence 3332221 248889999999999999999999999 9999999999998764 5999999998
Q ss_pred hhc
Q psy6828 156 EFK 158 (392)
Q Consensus 156 ~~~ 158 (392)
+..
T Consensus 167 ~~~ 169 (277)
T cd05036 167 RDI 169 (277)
T ss_pred ccc
Confidence 754
No 376
>cd08227 PK_STRAD_alpha Pseudokinase domain of STE20-related kinase adapter protein alpha. Protein Kinase family, STE20-related kinase adapter protein (STRAD) alpha subfamily, pseudokinase domain. The STRAD alpha subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hype
Probab=99.68 E-value=1.9e-16 Score=150.76 Aligned_cols=105 Identities=17% Similarity=0.226 Sum_probs=86.3
Q ss_pred CCCCCc--ceeEEEEEEEeecCcEEEEEEcCCCCh--hHHHHHHHHHHH-------------------------------
Q psy6828 50 NPDSDF--RYSAIFTPIGIYKGRIFAIKRIPKKSV--DITRAMKKELKI------------------------------- 94 (392)
Q Consensus 50 ~~lg~G--~~g~V~~~~~~~~~~~vAiK~~~~~~~--~~~~~~~~E~~~------------------------------- 94 (392)
+.||+| +|++||++.+..+|+.||+|.++.... ...+.+.+|+.+
T Consensus 4 ~~ig~G~~~~~~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~hpniv~~~~~~~~~~~~~lv~e~~~~ 83 (327)
T cd08227 4 TVIGRGFEDLMTVNLARYKPTGEYVTVRRINLEACTNEMVTFLQGELHVSKLFNHPNIVPYRATFIADNELWVVTSFMAY 83 (327)
T ss_pred hhccccccceEEEEEEeecccCcEEEEEEechhhccHHHHHHHHHHHHHHHhcCCCCeeeEEEEEEECCEEEEEEeccCC
Confidence 458888 789999999999999999999976432 334556667666
Q ss_pred ----HHhhc-CCcCCCHHHHHHHHHHHHHHHHHHhcCCcccccCCCCCceEEcCCceEEEeccccc
Q psy6828 95 ----DIMEN-EDVKLDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLVDSRWVVKLADFGLT 155 (392)
Q Consensus 95 ----~~l~~-~~~~l~~~~~~~i~~qi~~~l~ylH~~~iiiHrDlKp~NIll~~~~~~kl~DFGla 155 (392)
+++.. ....+++..+..++.|++.||.|||++++ +||||||+|||++.++.++++||+.+
T Consensus 84 ~~l~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~i-iH~dlkp~Nil~~~~~~~~l~~~~~~ 148 (327)
T cd08227 84 GSAKDLICTHFMDGMSELAIAYILQGVLKALDYIHHMGY-VHRSVKASHILISVDGKVYLSGLRSN 148 (327)
T ss_pred CcHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHHCCE-ecCCCChhhEEEecCCcEEEcccchh
Confidence 23322 12248999999999999999999999999 99999999999999999999999754
No 377
>cd05581 STKc_PDK1 Catalytic domain of the Protein Serine/Threonine Kinase, Phosphoinositide-dependent kinase 1. Serine/Threonine Kinases (STKs), Phosphoinositide-dependent kinase 1 (PDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PDK1 carries an N-terminal catalytic domain and a C-terminal pleckstrin homology (PH) domain that binds phosphoinositides. It phosphorylates the activation loop of AGC kinases that are regulated by PI3K such as PKB, SGK, and PKC, among others, and is crucial for their activation. Thus, it contributes in regulating many processes including metabolism, growth, proliferation, and survival. PDK1 also has the ability to auto
Probab=99.68 E-value=1.4e-16 Score=147.56 Aligned_cols=112 Identities=22% Similarity=0.316 Sum_probs=90.4
Q ss_pred eeccCCCCCcceeEEEEEEEeecCcEEEEEEcCCCCh---hHHHHHHHHHHH----------------------------
Q psy6828 46 SLSSNPDSDFRYSAIFTPIGIYKGRIFAIKRIPKKSV---DITRAMKKELKI---------------------------- 94 (392)
Q Consensus 46 ~~~~~~lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~~---~~~~~~~~E~~~---------------------------- 94 (392)
|...+.+|+|+||.||++.+..+++.||+|.+.+... ...+.+.+|..+
T Consensus 3 y~~~~~lg~g~~~~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~~~~l~~~~~i~~~~~~~~~~~~~~lv~e 82 (280)
T cd05581 3 FKFGKIIGEGSFSTVVLAKEKETNKEYAIKILDKRQLIKEKKVKYVKIEKEVLTRLNGHPGIIKLYYTFQDEENLYFVLE 82 (280)
T ss_pred ceEeeeecCCCceEEEEEEEcCCCCEEEEEEechHhccchHHHHHHHHHHHHHHhcccCCCchhHHHHhcCCceEEEEEc
Confidence 3445679999999999999999999999999976432 223344555444
Q ss_pred --------HHhhcCCcCCCHHHHHHHHHHHHHHHHHHhcCCcccccCCCCCceEEcCCceEEEeccccchhcc
Q psy6828 95 --------DIMENEDVKLDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLVDSRWVVKLADFGLTEFKR 159 (392)
Q Consensus 95 --------~~l~~~~~~l~~~~~~~i~~qi~~~l~ylH~~~iiiHrDlKp~NIll~~~~~~kl~DFGla~~~~ 159 (392)
+++.... .+++..+..++.|++.||.|||++++ +|+||||+||+++.++.++++|||++....
T Consensus 83 ~~~~~~L~~~l~~~~-~l~~~~~~~i~~ql~~~l~~Lh~~~~-~H~dl~~~ni~i~~~~~~~l~df~~~~~~~ 153 (280)
T cd05581 83 YAPNGELLQYIRKYG-SLDEKCTRFYAAEILLALEYLHSKGI-IHRDLKPENILLDKDMHIKITDFGTAKVLD 153 (280)
T ss_pred CCCCCcHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHHHCCe-eecCCCHHHeEECCCCCEEecCCccccccC
Confidence 2222222 58999999999999999999999999 999999999999999999999999987643
No 378
>cd08218 STKc_Nek1 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 1. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 1 (Nek1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek1 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek1 is associated with centrosomes throughout the cell cycle. It is involved in the formation of primary cilium and in the maintenance of centrosomes. It cycles through the nucleus and may be capable of relaying signals between the cilium and the nucleus. Nek1 is implicated in the development of polycysti
Probab=99.68 E-value=7.1e-17 Score=147.74 Aligned_cols=112 Identities=17% Similarity=0.254 Sum_probs=91.4
Q ss_pred eeccCCCCCcceeEEEEEEEeecCcEEEEEEcCCCC--hhHHHHHHHHHHH-----------------------------
Q psy6828 46 SLSSNPDSDFRYSAIFTPIGIYKGRIFAIKRIPKKS--VDITRAMKKELKI----------------------------- 94 (392)
Q Consensus 46 ~~~~~~lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~--~~~~~~~~~E~~~----------------------------- 94 (392)
|...+.+|+|+||.||.+.+..+|+.||+|.+.... ....+.+.+|+.+
T Consensus 2 y~~~~~lg~g~~g~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~~ 81 (256)
T cd08218 2 YVKVKKIGEGSFGKAILVKSKEDGKQYVIKEINISKMSPKEREESRKEVAVLSNMKHPNIVQYQESFEENGNLYIVMDYC 81 (256)
T ss_pred ceEEEEeccCCceEEEEEEEcCCCCEEEEEEEEhHhCChHHHHHHHHHHHHHHhCCCCCeeeeEeeecCCCeEEEEEecC
Confidence 344667999999999999999999999999986432 2334566777666
Q ss_pred ------HHhhc-CCcCCCHHHHHHHHHHHHHHHHHHhcCCcccccCCCCCceEEcCCceEEEeccccchhc
Q psy6828 95 ------DIMEN-EDVKLDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLVDSRWVVKLADFGLTEFK 158 (392)
Q Consensus 95 ------~~l~~-~~~~l~~~~~~~i~~qi~~~l~ylH~~~iiiHrDlKp~NIll~~~~~~kl~DFGla~~~ 158 (392)
+++.. ....+++.++..++.|++.|+.|||++++ +|+||+|+||+++.++.++++|||++...
T Consensus 82 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~i-~h~~l~~~nil~~~~~~~~l~d~~~~~~~ 151 (256)
T cd08218 82 EGGDLYKKINAQRGVLFPEDQILDWFVQICLALKHVHDRKI-LHRDIKSQNIFLTKDGTIKLGDFGIARVL 151 (256)
T ss_pred CCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHhCCE-ecCCCCHHHEEEcCCCCEEEeeccceeec
Confidence 22222 22357889999999999999999999999 99999999999999999999999998654
No 379
>cd05610 STKc_MASTL Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine-like kinase. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST-like (MASTL) kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. The MASTL kinases in this group carry only a catalytic domain, which contains a long insertion relative to MAST kinases. The human MASTL gene has also been labelled FLJ14813. A missense mutation in FLJ1481
Probab=99.68 E-value=1.4e-16 Score=165.22 Aligned_cols=113 Identities=19% Similarity=0.338 Sum_probs=92.3
Q ss_pred eeccCCCCCcceeEEEEEEEeecCcEEEEEEcCCCCh---hHHHHHHHHHHH--------------------------HH
Q psy6828 46 SLSSNPDSDFRYSAIFTPIGIYKGRIFAIKRIPKKSV---DITRAMKKELKI--------------------------DI 96 (392)
Q Consensus 46 ~~~~~~lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~~---~~~~~~~~E~~~--------------------------~~ 96 (392)
|...+.||+|+||.||+|.+..+++.||||++++... .....+..|+.+ +|
T Consensus 6 y~i~~~LG~G~fg~Vy~a~~~~~~~~vAiKvi~~~~~~~~~~~~~~~~E~~~l~~l~hp~Iv~~~~~~~~~~~~~lVmEy 85 (669)
T cd05610 6 FVIVKPISRGAFGKVYLGRKKNNSKLYAVKVVKKADMINKNMVHQVQAERDALALSKSPFIVHLYYSLQSANNVYLVMEY 85 (669)
T ss_pred EEEEEEEecCCCeEEEEEEECCCCcEEEEEEEehhhccCHHHHHHHHHHHHHHHhcCCCCcCeEEEEEEECCEEEEEEeC
Confidence 4456779999999999999999999999999976432 233556666655 22
Q ss_pred hhc--------CCcCCCHHHHHHHHHHHHHHHHHHhcCCcccccCCCCCceEEcCCceEEEeccccchhcc
Q psy6828 97 MEN--------EDVKLDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLVDSRWVVKLADFGLTEFKR 159 (392)
Q Consensus 97 l~~--------~~~~l~~~~~~~i~~qi~~~l~ylH~~~iiiHrDlKp~NIll~~~~~~kl~DFGla~~~~ 159 (392)
+.. ....+++..++.++.||+.||.|||++++ +||||||+|||++.++.+||+|||+++...
T Consensus 86 ~~g~~L~~li~~~~~l~~~~~~~i~~qil~aL~yLH~~gI-iHrDLKP~NILl~~~g~vkL~DFGls~~~~ 155 (669)
T cd05610 86 LIGGDVKSLLHIYGYFDEEMAVKYISEVALALDYLHRHGI-IHRDLKPDNMLISNEGHIKLTDFGLSKVTL 155 (669)
T ss_pred CCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCE-EeCCccHHHEEEcCCCCEEEEeCCCCcccc
Confidence 211 12257899999999999999999999999 999999999999999999999999998654
No 380
>cd07851 STKc_p38 Catalytic domain of the Serine/Threonine Kinase, p38 Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They function in the regulation of the cell cycle, cell development, cell differentiation, senescence, tumorigenesis, apoptosis, pain development and pain progression, and immune responses. p38 kinases are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK
Probab=99.68 E-value=1e-16 Score=153.62 Aligned_cols=133 Identities=26% Similarity=0.359 Sum_probs=103.0
Q ss_pred eeeeccCCCCCcceeEEEEEEEeecCcEEEEEEcCCCC--hhHHHHHHHHHHH-------------HHhhc---------
Q psy6828 44 QVSLSSNPDSDFRYSAIFTPIGIYKGRIFAIKRIPKKS--VDITRAMKKELKI-------------DIMEN--------- 99 (392)
Q Consensus 44 ~~~~~~~~lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~--~~~~~~~~~E~~~-------------~~l~~--------- 99 (392)
..|...+.||+|+||.||++.+..+++.||+|.+.... ....+.+.+|+.+ ++...
T Consensus 15 ~~y~~~~~ig~g~~g~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~ 94 (343)
T cd07851 15 DRYQNLSPVGSGAYGQVCSAFDTKTGRKVAIKKLSRPFQSAIHAKRTYRELRLLKHMDHENVIGLLDVFTPASSLEDFQD 94 (343)
T ss_pred CceEEEEEeccCCceEEEEEEECCCCcEEEEEecccccchhhHHHHHHHHHHHHHhccCCCHHHHHHHhhcccccccccc
Confidence 44666788999999999999999999999999986532 2233445556555 11100
Q ss_pred ----------------CCcCCCHHHHHHHHHHHHHHHHHHhcCCcccccCCCCCceEEcCCceEEEeccccchhccccc-
Q psy6828 100 ----------------EDVKLDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLVDSRWVVKLADFGLTEFKRDAE- 162 (392)
Q Consensus 100 ----------------~~~~l~~~~~~~i~~qi~~~l~ylH~~~iiiHrDlKp~NIll~~~~~~kl~DFGla~~~~~~~- 162 (392)
....+++..+..++.|++.||.|||+.++ +||||||+||++++++.+||+|||++.......
T Consensus 95 ~~lv~e~~~~~L~~~~~~~~l~~~~~~~~~~ql~~aL~~LH~~gi-~H~dlkp~Nill~~~~~~kL~dfg~~~~~~~~~~ 173 (343)
T cd07851 95 VYLVTHLMGADLNNIVKCQKLSDDHIQFLVYQILRGLKYIHSAGI-IHRDLKPSNIAVNEDCELKILDFGLARHTDDEMT 173 (343)
T ss_pred EEEEEecCCCCHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCe-ecCCCCHHHeEECCCCCEEEcccccccccccccc
Confidence 01258999999999999999999999999 999999999999999999999999987542210
Q ss_pred --------------------cccccccceeeeeee
Q psy6828 163 --------------------YTGTDQHSFLQHTYH 177 (392)
Q Consensus 163 --------------------~~~~d~~s~g~~~~~ 177 (392)
....|+||+|+++|+
T Consensus 174 ~~~~~~~y~aPE~~~~~~~~~~~~DvwslGv~l~e 208 (343)
T cd07851 174 GYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAE 208 (343)
T ss_pred CCcccccccCHHHHhCCCCCCchHhHHHHHHHHHH
Confidence 123489999998888
No 381
>cd06620 PKc_MAPKK_Byr1_like Catalytic domain of fungal Byr1-like dual-specificity MAP kinase kinases. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal Byr1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include
Probab=99.67 E-value=9.5e-17 Score=149.51 Aligned_cols=111 Identities=22% Similarity=0.326 Sum_probs=90.2
Q ss_pred eccCCCCCcceeEEEEEEEeecCcEEEEEEcCCCCh-hHHHHHHHHHHH--------------------------HHhhc
Q psy6828 47 LSSNPDSDFRYSAIFTPIGIYKGRIFAIKRIPKKSV-DITRAMKKELKI--------------------------DIMEN 99 (392)
Q Consensus 47 ~~~~~lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~~-~~~~~~~~E~~~--------------------------~~l~~ 99 (392)
...+.||+|+||+||++.+..+++.||+|.+..... ...+.+.+|+++ +|+..
T Consensus 8 ~~~~~ig~g~~g~v~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~ 87 (284)
T cd06620 8 ETISDLGAGNGGSVSKVKHIPTGTVMAKKVVHIGAKSSVRKQILRELQIMHECRSPYIVSFYGAFLNENNICMCMEFMDC 87 (284)
T ss_pred HHHHHcCCCCCeEEEEEEEcCCCcEEEEEEEEecCcchHHHHHHHHHHHHHHcCCCCcceEeeeEecCCEEEEEEecCCC
Confidence 345679999999999999999999999998865432 345667778776 22221
Q ss_pred --------CCcCCCHHHHHHHHHHHHHHHHHHhc-CCcccccCCCCCceEEcCCceEEEeccccchhc
Q psy6828 100 --------EDVKLDNMFIASLVADILRGMLYLHD-SALRYHGNLKASNCLVDSRWVVKLADFGLTEFK 158 (392)
Q Consensus 100 --------~~~~l~~~~~~~i~~qi~~~l~ylH~-~~iiiHrDlKp~NIll~~~~~~kl~DFGla~~~ 158 (392)
....+++..+..++.|++.+|.|||+ .++ +||||||+||++++++.++|+|||++...
T Consensus 88 ~~L~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~~i-~H~dl~p~nil~~~~~~~~l~d~gl~~~~ 154 (284)
T cd06620 88 GSLDRIYKKGGPIPVEILGKIAVAVVEGLTYLYNVHRI-MHRDIKPSNILVNSRGQIKLCDFGVSGEL 154 (284)
T ss_pred CCHHHHHHhccCCCHHHHHHHHHHHHHHHHHHHHhcCe-eccCCCHHHEEECCCCcEEEccCCcccch
Confidence 12257889999999999999999997 578 99999999999999999999999987643
No 382
>cd05050 PTKc_Musk Catalytic domain of the Protein Tyrosine Kinase, Muscle-specific kinase. Protein Tyrosine Kinase (PTK) family; Muscle-specific kinase (Musk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Musk is a receptor tyr kinase (RTK) containing an extracellular region with four immunoglobulin-like domains and a cysteine-rich cluster, a transmembrane segment, and an intracellular catalytic domain. Musk is expressed and concentrated in the postsynaptic membrane in skeletal muscle. It is essential for the establishment of the neuromuscular junction (NMJ), a peripheral synapse that conveys signals from motor neurons to muscle cells. Agrin, a large proteoglycan released from motor neurons, stimulates M
Probab=99.67 E-value=2.3e-16 Score=147.17 Aligned_cols=112 Identities=21% Similarity=0.349 Sum_probs=89.2
Q ss_pred eeccCCCCCcceeEEEEEEEee-----cCcEEEEEEcCCCCh-hHHHHHHHHHHH-------------------------
Q psy6828 46 SLSSNPDSDFRYSAIFTPIGIY-----KGRIFAIKRIPKKSV-DITRAMKKELKI------------------------- 94 (392)
Q Consensus 46 ~~~~~~lg~G~~g~V~~~~~~~-----~~~~vAiK~~~~~~~-~~~~~~~~E~~~------------------------- 94 (392)
+...+.||+|+||.||++.+.. ++..||+|.+..... ...+.+.+|+.+
T Consensus 7 ~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~ei~~l~~l~h~~iv~~~~~~~~~~~~~lv 86 (288)
T cd05050 7 IEYVRDIGQGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAALMAEFDHPNIVKLLGVCAVGKPMCLL 86 (288)
T ss_pred ceecccccccccccEEEEEEcccCCCCcceeEEEEecCCCcCHHHHHHHHHHHHHHHhcCCCchheEEEEEcCCCccEEE
Confidence 3446789999999999998653 578999999976532 344567777765
Q ss_pred ----------HHhhcC---------------------CcCCCHHHHHHHHHHHHHHHHHHhcCCcccccCCCCCceEEcC
Q psy6828 95 ----------DIMENE---------------------DVKLDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLVDS 143 (392)
Q Consensus 95 ----------~~l~~~---------------------~~~l~~~~~~~i~~qi~~~l~ylH~~~iiiHrDlKp~NIll~~ 143 (392)
+++... ...+++..+..++.|++.||.|||++++ +||||||+||+++.
T Consensus 87 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~aL~~lH~~~i-~H~dl~p~nil~~~ 165 (288)
T cd05050 87 FEYMAYGDLNEFLRHRSPRAQCSLSHSTSSARKCGLNPLPLSCTEQLCIAKQVAAGMAYLSERKF-VHRDLATRNCLVGE 165 (288)
T ss_pred EecCCCCCHHHHHHHcCccccccccccccccccccccccccCHHHHHHHHHHHHHHHHHHHhCCe-ecccccHhheEecC
Confidence 222211 1146788889999999999999999999 99999999999999
Q ss_pred CceEEEeccccchhc
Q psy6828 144 RWVVKLADFGLTEFK 158 (392)
Q Consensus 144 ~~~~kl~DFGla~~~ 158 (392)
++.+||+|||++...
T Consensus 166 ~~~~~l~dfg~~~~~ 180 (288)
T cd05050 166 NMVVKIADFGLSRNI 180 (288)
T ss_pred CCceEECccccceec
Confidence 999999999998643
No 383
>cd06917 STKc_NAK1_like Catalytic domain of Fungal Nak1-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), Nak1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nak1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of Schizosaccharomyces pombe Nak1, Saccharomyces cerevisiae Kic1p (kinase that interacts with Cdc31p) and related proteins. Nak1 (also known as N-rich kinase 1), is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Kic1p is required by budding yeast for cell integrity and morphogenesis. Kic1p interacts with Cdc31p, the yeast homologue of cent
Probab=99.67 E-value=2.6e-16 Score=145.80 Aligned_cols=110 Identities=24% Similarity=0.421 Sum_probs=90.5
Q ss_pred eccCCCCCcceeEEEEEEEeecCcEEEEEEcCCCCh-hHHHHHHHHHHH-------------------------------
Q psy6828 47 LSSNPDSDFRYSAIFTPIGIYKGRIFAIKRIPKKSV-DITRAMKKELKI------------------------------- 94 (392)
Q Consensus 47 ~~~~~lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~~-~~~~~~~~E~~~------------------------------- 94 (392)
...+.+|+|+||.||+|.+..+++.||+|.++.... ...+.+.+|+.+
T Consensus 4 ~~~~~l~~g~~g~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~~~~~~~vi~~~~~~~~~~~~~lv~e~ 83 (277)
T cd06917 4 QRLELIGRGAYGAVYRGKHVPTGRVVALKIINLDTPDDDVSDIQREVALLSQLRQSQPPNITKYYGSYLKGPRLWIIMEY 83 (277)
T ss_pred hhhhheeccCCceEEEEEEcCCCcEEEEEEecCCCCchhHHHHHHHHHHHHHhccCCCCCeeeEeeeeeeCCEEEEEEec
Confidence 345679999999999999999999999999865422 334455566554
Q ss_pred -------HHhhcCCcCCCHHHHHHHHHHHHHHHHHHhcCCcccccCCCCCceEEcCCceEEEeccccchhcc
Q psy6828 95 -------DIMENEDVKLDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLVDSRWVVKLADFGLTEFKR 159 (392)
Q Consensus 95 -------~~l~~~~~~l~~~~~~~i~~qi~~~l~ylH~~~iiiHrDlKp~NIll~~~~~~kl~DFGla~~~~ 159 (392)
++++.. .+++..+..++.|++.||.|||+.++ +|+||+|+||+++.++.++|+|||++....
T Consensus 84 ~~~~~L~~~~~~~--~l~~~~~~~i~~~i~~~l~~lh~~~i-~H~dl~p~ni~i~~~~~~~l~dfg~~~~~~ 152 (277)
T cd06917 84 AEGGSVRTLMKAG--PIAEKYISVIIREVLVALKYIHKVGV-IHRDIKAANILVTNTGNVKLCDFGVAALLN 152 (277)
T ss_pred CCCCcHHHHHHcc--CCCHHHHHHHHHHHHHHHHHHHhCCc-ccCCcCHHHEEEcCCCCEEEccCCceeecC
Confidence 222222 58899999999999999999999999 999999999999999999999999887654
No 384
>cd06621 PKc_MAPKK_Pek1_like Catalytic domain of fungal Pek1-like dual-specificity MAP kinase kinases. Protein kinases (PKs), MAP kinase kinase(MAPKK) subfamily, fungal Pek1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include
Probab=99.67 E-value=1.8e-16 Score=147.89 Aligned_cols=130 Identities=22% Similarity=0.326 Sum_probs=101.8
Q ss_pred eccCCCCCcceeEEEEEEEeecCcEEEEEEcCCCCh-hHHHHHHHHHHH-------------------------------
Q psy6828 47 LSSNPDSDFRYSAIFTPIGIYKGRIFAIKRIPKKSV-DITRAMKKELKI------------------------------- 94 (392)
Q Consensus 47 ~~~~~lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~~-~~~~~~~~E~~~------------------------------- 94 (392)
...+.+|.|++|.||++.+..+++.||+|.+..... .....+.+|+++
T Consensus 4 ~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~lv~e~~ 83 (287)
T cd06621 4 VELSRLGEGAGGSVTKCRLKNTGMIFALKTITTDPNPDLQKQILRELEINKSCKSPYIVKYYGAFLDESSSSIGIAMEYC 83 (287)
T ss_pred EEEEEeccCCceEEEEEEECCCCeEEEEEEEecCCchHHHHHHHHHHHHHHhCCCCCeeeeeeEEEccCCCeEEEEEEec
Confidence 345679999999999999999999999999975433 345567778776
Q ss_pred ------HHhh---cCCcCCCHHHHHHHHHHHHHHHHHHhcCCcccccCCCCCceEEcCCceEEEeccccchhccccc---
Q psy6828 95 ------DIME---NEDVKLDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLVDSRWVVKLADFGLTEFKRDAE--- 162 (392)
Q Consensus 95 ------~~l~---~~~~~l~~~~~~~i~~qi~~~l~ylH~~~iiiHrDlKp~NIll~~~~~~kl~DFGla~~~~~~~--- 162 (392)
+++. .....+++..+..++.|++.||.|||+.++ +|+||+|+||+++.++.++|+|||++.......
T Consensus 84 ~~~~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~lH~~~i-~H~dl~~~nil~~~~~~~~l~dfg~~~~~~~~~~~~ 162 (287)
T cd06621 84 EGGSLDSIYKKVKKRGGRIGEKVLGKIAESVLKGLSYLHSRKI-IHRDIKPSNILLTRKGQVKLCDFGVSGELVNSLAGT 162 (287)
T ss_pred CCCCHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCc-ccCCCCHHHEEEecCCeEEEeecccccccccccccc
Confidence 1111 122347888899999999999999999999 999999999999999999999999976432111
Q ss_pred ------------------cccccccceeeeeee
Q psy6828 163 ------------------YTGTDQHSFLQHTYH 177 (392)
Q Consensus 163 ------------------~~~~d~~s~g~~~~~ 177 (392)
...+|+||+|+++|+
T Consensus 163 ~~~~~~y~~pE~~~~~~~~~~~Dv~slG~il~~ 195 (287)
T cd06621 163 FTGTSFYMAPERIQGKPYSITSDVWSLGLTLLE 195 (287)
T ss_pred ccCCccccCHHHhcCCCCCchhhHHHHHHHHHH
Confidence 112488888888887
No 385
>cd05576 STKc_RPK118_like Catalytic domain of the Protein Serine/Threonine Kinases, RPK118 and similar proteins. Serine/Threonine Kinases (STKs), RPK118-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RPK118-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily show similarity to human RPK118, which contains an N-terminal Phox homology (PX) domain, a Microtubule Interacting and Trafficking (MIT) domain, and a kinase domain containing a long insert. Also included in the family is human RPK60 (or ribosomal protein S6 kinase-like 1), which also contains MIT and kinase domains but lacks a PX domain. RPK118 binds sphingosine kinase, a key enzyme in the synthesis of sphingosine 1-phospha
Probab=99.67 E-value=9.1e-17 Score=145.73 Aligned_cols=104 Identities=14% Similarity=0.154 Sum_probs=80.0
Q ss_pred cceeEEEEEEEeecCcEEEEEEcCCCChhHHHH--HHHHH--HH-----------------HHhhcC--------CcCCC
Q psy6828 55 FRYSAIFTPIGIYKGRIFAIKRIPKKSVDITRA--MKKEL--KI-----------------DIMENE--------DVKLD 105 (392)
Q Consensus 55 G~~g~V~~~~~~~~~~~vAiK~~~~~~~~~~~~--~~~E~--~~-----------------~~l~~~--------~~~l~ 105 (392)
|.||.||++.+..+++.||+|.+++......+. ..... .+ +++..+ ...++
T Consensus 4 g~~~~v~~~~~~~~~~~~~~K~i~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~l~ 83 (237)
T cd05576 4 GVIDKVLLVMDTRTQQTFILKGLRKSSEYSRERLTIIPHCVPNMVCLHKYIVSEDSVFLVLQHAEGGKLWSHISKFLNIP 83 (237)
T ss_pred cccceEEEEEEccCCcEEEEEeecchhhhhhHHHHHHhcCCCceeehhhheecCCeEEEEEecCCCCCHHHHHHHhcCCC
Confidence 889999999999999999999997654211110 00000 00 222211 12589
Q ss_pred HHHHHHHHHHHHHHHHHHhcCCcccccCCCCCceEEcCCceEEEeccccchhcc
Q psy6828 106 NMFIASLVADILRGMLYLHDSALRYHGNLKASNCLVDSRWVVKLADFGLTEFKR 159 (392)
Q Consensus 106 ~~~~~~i~~qi~~~l~ylH~~~iiiHrDlKp~NIll~~~~~~kl~DFGla~~~~ 159 (392)
+..+..++.|++.||.|||++++ +||||||+||+++.++.++++|||++....
T Consensus 84 ~~~~~~~~~ql~~~l~~lH~~~i-~H~dlkp~Nil~~~~~~~~l~df~~~~~~~ 136 (237)
T cd05576 84 EECVKRWAAEMVVALDALHREGI-VCRDLNPNNILLDDRGHIQLTYFSRWSEVE 136 (237)
T ss_pred HHHHHHHHHHHHHHHHHHHhCCe-eccCCCHHHEEEcCCCCEEEecccchhccc
Confidence 99999999999999999999999 999999999999999999999999876543
No 386
>cd05118 STKc_CMGC Catalytic domain of CMGC family Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), CMGC family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CMGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The CMGC family consists of Cyclin-Dependent protein Kinases (CDKs), Mitogen-activated protein kinases (MAPKs) such as Extracellular signal-regulated kinase (ERKs), c-Jun N-terminal kinases (JNKs), and p38, and similar proteins. CDKs belong to a large subfamily of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. MAPKs serve as important mediators of cellular responses to extracellular signals. They
Probab=99.67 E-value=1.8e-16 Score=147.17 Aligned_cols=111 Identities=26% Similarity=0.455 Sum_probs=92.0
Q ss_pred cCCCCCcceeEEEEEEEeecCcEEEEEEcCCCChh--HHHHHHHHHHH--------------------------------
Q psy6828 49 SNPDSDFRYSAIFTPIGIYKGRIFAIKRIPKKSVD--ITRAMKKELKI-------------------------------- 94 (392)
Q Consensus 49 ~~~lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~~~--~~~~~~~E~~~-------------------------------- 94 (392)
.+.+|+|++|.||++.+..+++.+++|.++..... ....+.+|+.+
T Consensus 4 ~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~~~~~ 83 (283)
T cd05118 4 LGKIGEGTYGVVYKARDKLTGEIVAIKKIKLRFESEGIPKTALREIKLLKELNHPNIIKLLDVFRHKGDLYLVFEFMDTD 83 (283)
T ss_pred ceeeecCCCceEEEEEcCCCCcEEEEEEeccccccchhHHHHHHHHHHHHHhcCCCcchHHHhhccCCCEEEEEeccCCC
Confidence 45799999999999999889999999998765432 34456666554
Q ss_pred --HHhhcCCcCCCHHHHHHHHHHHHHHHHHHhcCCcccccCCCCCceEEcCCceEEEeccccchhccc
Q psy6828 95 --DIMENEDVKLDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLVDSRWVVKLADFGLTEFKRD 160 (392)
Q Consensus 95 --~~l~~~~~~l~~~~~~~i~~qi~~~l~ylH~~~iiiHrDlKp~NIll~~~~~~kl~DFGla~~~~~ 160 (392)
+++......+++..+..++.|++.||.|||++++ +|+||||+||+++.++.+||+|||.+.....
T Consensus 84 l~~~l~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~i-~H~dl~p~nili~~~~~~~l~df~~~~~~~~ 150 (283)
T cd05118 84 LYKLIKDRQRGLPESLIKSYLYQLLQGLAFCHSHGI-LHRDLKPENLLINTEGVLKLADFGLARSFGS 150 (283)
T ss_pred HHHHHHhhcccCCHHHHHHHHHHHHHHHHHHHHCCe-eecCcCHHHEEECCCCcEEEeeeeeeEecCC
Confidence 3333334478999999999999999999999999 9999999999999999999999999865543
No 387
>PLN03224 probable serine/threonine protein kinase; Provisional
Probab=99.67 E-value=3.4e-16 Score=155.47 Aligned_cols=75 Identities=24% Similarity=0.274 Sum_probs=58.4
Q ss_pred CCHHHHHHHHHHHHHHHHHHhcCCcccccCCCCCceEEcCCceEEEeccccchhccccccccccccceeeeeeeccC
Q psy6828 104 LDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLVDSRWVVKLADFGLTEFKRDAEYTGTDQHSFLQHTYHVNR 180 (392)
Q Consensus 104 l~~~~~~~i~~qi~~~l~ylH~~~iiiHrDlKp~NIll~~~~~~kl~DFGla~~~~~~~~~~~d~~s~g~~~~~~~~ 180 (392)
+++..+..++.|++.||.|||++++ +||||||+|||++.++.+||+|||++......... ...+..+.+.|.+||
T Consensus 306 ~~~~~~~~i~~ql~~aL~~lH~~~i-vHrDLKp~NILl~~~~~~kL~DFGla~~~~~~~~~-~~~~g~~tp~Y~aPE 380 (507)
T PLN03224 306 RDINVIKGVMRQVLTGLRKLHRIGI-VHRDIKPENLLVTVDGQVKIIDFGAAVDMCTGINF-NPLYGMLDPRYSPPE 380 (507)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHCCe-ecCCCchHhEEECCCCcEEEEeCcCccccccCCcc-CccccCCCcceeChh
Confidence 4566788999999999999999999 99999999999999999999999999765432211 122233445666665
No 388
>cd05086 PTKc_Aatyk2 Catalytic domain of the Protein Tyrosine Kinase, Apoptosis-associated tyrosine kinase 2. Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 2 (Aatyk2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk2 is a member of the Aatyk subfamily of proteins, which are receptor kinases containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk2 is also called lemur tyrosine kinase 2 (Lmtk2) or brain-enriched kinase (Brek). It is expressed at high levels in early postnatal brain, and has been shown to play a role in nerve growth factor (NGF) signaling. Studies with knockout mice reveal that Aatyk2 is essential for late stage
Probab=99.67 E-value=5.2e-16 Score=143.33 Aligned_cols=106 Identities=13% Similarity=0.249 Sum_probs=81.1
Q ss_pred CCCCcceeEEEEEEEeecC--cEEEEEEcCCCC-hhHHHHHHHHHHH---------------------------------
Q psy6828 51 PDSDFRYSAIFTPIGIYKG--RIFAIKRIPKKS-VDITRAMKKELKI--------------------------------- 94 (392)
Q Consensus 51 ~lg~G~~g~V~~~~~~~~~--~~vAiK~~~~~~-~~~~~~~~~E~~~--------------------------------- 94 (392)
.||+|+||.||++.....+ ..+++|.+.... ....+.+.+|+.+
T Consensus 2 ~lg~G~~g~v~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~e~~~~~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~ 81 (268)
T cd05086 2 EIGNGWFGKVLLSEIYTDTGVARVVVKELKANASSKEQNEFLQQGDPYRILQHPNILQCLGQCVEAIPYLLVFEYCELGD 81 (268)
T ss_pred cCCCCcCceEEEEEEEcCCCcceEEEEEecCCCChHHHHHHHHHHHHHhccCCcchhheEEEecCCCccEEEEecCCCCc
Confidence 5899999999999754332 356788776543 2345667777654
Q ss_pred --HHhhcC---CcCCCHHHHHHHHHHHHHHHHHHhcCCcccccCCCCCceEEcCCceEEEeccccchh
Q psy6828 95 --DIMENE---DVKLDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLVDSRWVVKLADFGLTEF 157 (392)
Q Consensus 95 --~~l~~~---~~~l~~~~~~~i~~qi~~~l~ylH~~~iiiHrDlKp~NIll~~~~~~kl~DFGla~~ 157 (392)
+++... ...+++..+..++.|++.||.|||++++ +||||||+|||++.++.+||+|||++..
T Consensus 82 L~~~l~~~~~~~~~~~~~~~~~~~~~i~~al~~lH~~~i-~H~dikp~nil~~~~~~~~l~Dfg~~~~ 148 (268)
T cd05086 82 LKSYLSQEQWHRRNSQLLLLQRMACEIAAGVTHMHKHNF-LHSDLALRNCFLTSDLTVKVGDYGIGPS 148 (268)
T ss_pred HHHHHHhhhcccccccHHHHHHHHHHHHHHHHHHHHCCe-eccCCccceEEEcCCccEEecccccccc
Confidence 222211 1135666778999999999999999999 9999999999999999999999998753
No 389
>cd06610 STKc_OSR1_SPAK Catalytic domain of the Protein Serine/Threonine Kinases, Oxidative stress response kinase and Ste20-related proline alanine-rich kinase. Serine/threonine kinases (STKs), oxidative stress response kinase (OSR1) and Ste20-related proline alanine-rich kinase (SPAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The OSR1 and SPAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SPAK is also referred to as STK39 or PASK (proline-alanine-rich STE20-related kinase). OSR1 and SPAK regulate the activity of cation-chloride cotransporters through direct interaction and phosphorylation. They are also implicated in cytoskeletal rearrangement, cell differentiation, transformation and proliferation. OSR1
Probab=99.67 E-value=3.6e-16 Score=143.72 Aligned_cols=113 Identities=28% Similarity=0.413 Sum_probs=93.2
Q ss_pred eccCCCCCcceeEEEEEEEeecCcEEEEEEcCCCCh-hHHHHHHHHHHH-------------------------------
Q psy6828 47 LSSNPDSDFRYSAIFTPIGIYKGRIFAIKRIPKKSV-DITRAMKKELKI------------------------------- 94 (392)
Q Consensus 47 ~~~~~lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~~-~~~~~~~~E~~~------------------------------- 94 (392)
...+.+|.|+||.||++....++..+|+|.+..... .....+.+|+..
T Consensus 4 ~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~iv~e~~~~ 83 (267)
T cd06610 4 ELIEVIGVGATAVVYAAICLPNNEKVAIKRIDLEKCQTSVDELRKEVQAMSQCNHPNVVKYYTSFVVGDELWLVMPYLSG 83 (267)
T ss_pred eeeeeecCCCCeEEEEEEEcCCCcEEEEEEeccCCcchHHHHHHHHHHHHHhcCCCCEEEEEEEEeeCCEEEEEEeccCC
Confidence 345679999999999999888999999999975432 344567777765
Q ss_pred ----HHhhcC--CcCCCHHHHHHHHHHHHHHHHHHhcCCcccccCCCCCceEEcCCceEEEeccccchhccc
Q psy6828 95 ----DIMENE--DVKLDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLVDSRWVVKLADFGLTEFKRD 160 (392)
Q Consensus 95 ----~~l~~~--~~~l~~~~~~~i~~qi~~~l~ylH~~~iiiHrDlKp~NIll~~~~~~kl~DFGla~~~~~ 160 (392)
+++... ...+++..+..++.|++.||.|||+.++ +||||||+||++++++.+||+|||++.....
T Consensus 84 ~~l~~~~~~~~~~~~~~~~~~~~~~~ql~~al~~lh~~~i-~h~~l~p~ni~~~~~~~~~l~df~~~~~~~~ 154 (267)
T cd06610 84 GSLLDIMKSSYPRGGLDEAIIATVLKEVLKGLEYLHSNGQ-IHRDIKAGNILLGEDGSVKIADFGVSASLAD 154 (267)
T ss_pred CcHHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHhCCe-ecCCCCHHhEEEcCCCCEEEcccchHHHhcc
Confidence 333322 1358999999999999999999999999 9999999999999999999999999876543
No 390
>cd05123 STKc_AGC Catalytic domain of AGC family Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), AGC (Protein Kinases A, G and C) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The AGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and Phosphoinositide 3-Kinase (PI3K). Members of this family include cAMP-dependent Protein Kinase (PKA), cGMP-dependent Protein Kinase (PKG), Protein Kinase C (PKC), Protein Kinase B (PKB), G protein-coupled Receptor Kinase (GRK), Serum- and Glucocorticoid-induced Kinase (SGK), and 70 kDa ribosomal Protein S6 Kinase (p70S6K or S6K), among others. AGC kinases share an activation mechanism based on the phosphorylation of up to three sites: the activation loop (A-loop), the hydrophobic motif (HM) and the
Probab=99.67 E-value=2.6e-16 Score=143.28 Aligned_cols=106 Identities=23% Similarity=0.317 Sum_probs=88.5
Q ss_pred CCCcceeEEEEEEEeecCcEEEEEEcCCCCh---hHHHHHHHHHHH----------------------------------
Q psy6828 52 DSDFRYSAIFTPIGIYKGRIFAIKRIPKKSV---DITRAMKKELKI---------------------------------- 94 (392)
Q Consensus 52 lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~~---~~~~~~~~E~~~---------------------------------- 94 (392)
+|+|+||.||.+.+..+++.||+|.+.+... .....+..|+.+
T Consensus 1 lg~G~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~~~~~~L 80 (250)
T cd05123 1 LGKGSFGKVLLVRKKDTGKLYAMKVLKKKKIIKRKEVEHTLTERNILSRINHPFIVKLHYAFQTEEKLYLVLEYAPGGEL 80 (250)
T ss_pred CCCCCceEEEEEEECCCCcEEEEEEeehhhhcchHHHHHHHHHHHHHHHcCCCcHHHHHHHeecCCeeEEEEecCCCCcH
Confidence 6899999999999988899999999876543 234466666655
Q ss_pred -HHhhcCCcCCCHHHHHHHHHHHHHHHHHHhcCCcccccCCCCCceEEcCCceEEEeccccchhcc
Q psy6828 95 -DIMENEDVKLDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLVDSRWVVKLADFGLTEFKR 159 (392)
Q Consensus 95 -~~l~~~~~~l~~~~~~~i~~qi~~~l~ylH~~~iiiHrDlKp~NIll~~~~~~kl~DFGla~~~~ 159 (392)
+++.... .+++..+..++.|++.||.|+|+.++ +|+||||+||+++.++.++|+|||++....
T Consensus 81 ~~~l~~~~-~l~~~~~~~~~~qi~~~l~~lh~~~~-~H~~l~p~ni~~~~~~~~~l~d~~~~~~~~ 144 (250)
T cd05123 81 FSHLSKEG-RFSEERARFYAAEIVLALEYLHSLGI-IYRDLKPENILLDADGHIKLTDFGLAKELS 144 (250)
T ss_pred HHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHHCCc-eecCCCcceEEEcCCCcEEEeecCcceecc
Confidence 2333222 58999999999999999999999999 999999999999999999999999987543
No 391
>cd08528 STKc_Nek10 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 10. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 10 (Nek10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek10 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. No function has yet been ascribed to Nek10. The gene encoding Nek10 is a putative causative gene for breast cancer; it is located within a breast cancer susceptibility loci on chromosome 3p24.
Probab=99.67 E-value=2.9e-16 Score=144.85 Aligned_cols=129 Identities=17% Similarity=0.266 Sum_probs=98.1
Q ss_pred ccCCCCCcceeEEEEEEEee-cCcEEEEEEcCCCC----------hhHHHHHHHHHHH----------------------
Q psy6828 48 SSNPDSDFRYSAIFTPIGIY-KGRIFAIKRIPKKS----------VDITRAMKKELKI---------------------- 94 (392)
Q Consensus 48 ~~~~lg~G~~g~V~~~~~~~-~~~~vAiK~~~~~~----------~~~~~~~~~E~~~---------------------- 94 (392)
..+.+|+|+||.||++.+.. +++.+|+|.+.... ......+.+|+.+
T Consensus 4 ~~~~ig~G~~~~v~~~~~~~~~~~~~avk~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~ 83 (269)
T cd08528 4 VLEHLGSGAFGCVYKVRKKNNGQNLLALKEINVHNPAFGKDKRERDKSIGDIVSEVTIIKEQLRHPNIVRYYKTFLENDR 83 (269)
T ss_pred hhhhhcCCCCceEEEEEEcCCCCceeeeeEeeccccccccccccchHHHHHHHHHHHHHhhcCCCCCeeeEEeeEccCCe
Confidence 45679999999999999887 67899999885321 1233445566554
Q ss_pred -----HH---------h---hcCCcCCCHHHHHHHHHHHHHHHHHHhc-CCcccccCCCCCceEEcCCceEEEeccccch
Q psy6828 95 -----DI---------M---ENEDVKLDNMFIASLVADILRGMLYLHD-SALRYHGNLKASNCLVDSRWVVKLADFGLTE 156 (392)
Q Consensus 95 -----~~---------l---~~~~~~l~~~~~~~i~~qi~~~l~ylH~-~~iiiHrDlKp~NIll~~~~~~kl~DFGla~ 156 (392)
++ + ......+++..++.++.|++.||.|||+ .++ +|+||||+||+++.++.+||+|||++.
T Consensus 84 ~~lv~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~~i-~H~dl~~~nil~~~~~~~~l~dfg~~~ 162 (269)
T cd08528 84 LYIVMDLIEGAPLGEHFNSLKEKKQRFTEERIWNIFVQMVLALRYLHKEKRI-VHRDLTPNNIMLGEDDKVTITDFGLAK 162 (269)
T ss_pred EEEEEecCCCCcHHHHHHHHHhccCCCCHHHHHHHHHHHHHHHHHhccCCce-eecCCCHHHEEECCCCcEEEeccccee
Confidence 11 1 1123358899999999999999999996 678 999999999999999999999999987
Q ss_pred hccccc----------------------cccccccceeeeeee
Q psy6828 157 FKRDAE----------------------YTGTDQHSFLQHTYH 177 (392)
Q Consensus 157 ~~~~~~----------------------~~~~d~~s~g~~~~~ 177 (392)
...... ....|+||+|+++|+
T Consensus 163 ~~~~~~~~~~~~~~~~~~~Pe~~~~~~~~~~~Dv~slG~ll~~ 205 (269)
T cd08528 163 QKQPESKLTSVVGTILYSCPEIVKNEPYGEKADVWAFGCILYQ 205 (269)
T ss_pred ecccccccccccCcccCcChhhhcCCCCchHHHHHHHHHHHHH
Confidence 543321 112388888888887
No 392
>cd07830 STKc_MAK_like Catalytic domain of Male germ cell-Associated Kinase-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Male germ cell-Associated Kinase (MAK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of human MAK and MAK-related kinase (MRK), Saccharomyces cerevisiae Ime2p, Schizosaccharomyces pombe Mei4-dependent protein 3 (Mde3) and Pit1, Caenorhabditis elegans dyf-5, Arabidopsis thaliana MHK, and similar proteins. These proteins play important roles during meiosis. MAK is highly expressed in testicular cells specifically in the meiotic phase, but is not essential for spermatogenesis and fertili
Probab=99.67 E-value=2.5e-16 Score=146.36 Aligned_cols=111 Identities=28% Similarity=0.418 Sum_probs=86.3
Q ss_pred ccCCCCCcceeEEEEEEEeecCcEEEEEEcCCCChh-HHHHHHHHHHH--------------------------------
Q psy6828 48 SSNPDSDFRYSAIFTPIGIYKGRIFAIKRIPKKSVD-ITRAMKKELKI-------------------------------- 94 (392)
Q Consensus 48 ~~~~lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~~~-~~~~~~~E~~~-------------------------------- 94 (392)
..+.||+|+||+||+|....+++.|+||.+...... ......+|+..
T Consensus 3 ~~~~ig~g~~g~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~ 82 (283)
T cd07830 3 VIKQLGDGTFGSVYLARNKETGELVAIKKMKKKFYSWEECMNLREVKSLRKLNEHPNIVKLKEVFRENDELYFVFEYMEG 82 (283)
T ss_pred eheeeccCCceEEEEEEECCCCcEEEEEEehhhccchhHHHHHHHHHHHHhccCCCCchhHHHHhhcCCcEEEEEecCCC
Confidence 356799999999999998888999999998654221 11111222222
Q ss_pred ---HHhhcC-CcCCCHHHHHHHHHHHHHHHHHHhcCCcccccCCCCCceEEcCCceEEEeccccchhcc
Q psy6828 95 ---DIMENE-DVKLDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLVDSRWVVKLADFGLTEFKR 159 (392)
Q Consensus 95 ---~~l~~~-~~~l~~~~~~~i~~qi~~~l~ylH~~~iiiHrDlKp~NIll~~~~~~kl~DFGla~~~~ 159 (392)
+++... ...+++.++..++.|++.+|.|||++++ +|+||||+||++++++.++|+|||++....
T Consensus 83 ~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~Lh~~~i-~H~dl~~~ni~i~~~~~~~l~d~~~~~~~~ 150 (283)
T cd07830 83 NLYQLMKDRKGKPFSESVIRSIIYQILQGLAHIHKHGF-FHRDLKPENLLVSGPEVVKIADFGLAREIR 150 (283)
T ss_pred CHHHHHHhcccccCCHHHHHHHHHHHHHHHHHHHHCCc-ccCCCChhhEEEcCCCCEEEeecccceecc
Confidence 222222 1357999999999999999999999999 999999999999999999999999987543
No 393
>cd08225 STKc_Nek5 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 5. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 5 (Nek5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek5 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. The specific function of Nek5 is unknown.
Probab=99.67 E-value=1.5e-16 Score=145.46 Aligned_cols=112 Identities=21% Similarity=0.270 Sum_probs=89.7
Q ss_pred eccCCCCCcceeEEEEEEEeecCcEEEEEEcCCCCh--hHHHHHHHHHHH------------------------------
Q psy6828 47 LSSNPDSDFRYSAIFTPIGIYKGRIFAIKRIPKKSV--DITRAMKKELKI------------------------------ 94 (392)
Q Consensus 47 ~~~~~lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~~--~~~~~~~~E~~~------------------------------ 94 (392)
...+.+|+|+||.||++.+..+|+.||+|.+..... ...+.+.+|+.+
T Consensus 3 ~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~E~~~l~~~~h~~i~~~~~~~~~~~~~~lv~e~~~ 82 (257)
T cd08225 3 EIIKKIGEGSFGKIYLAKAKSDSEHCVIKEIDLTKMPVKEKEASKKEVILLAKMKHPNIVTFFASFQENGRLFIVMEYCD 82 (257)
T ss_pred eEEEEecCCCcceEEEEEEcCCCceEEEEEeeHhhccchhhHHHHHHHHHHHhCCCCChhhhhheeccCCeEEEEEecCC
Confidence 345679999999999999999999999999865422 234556677765
Q ss_pred -----HHhhc-CCcCCCHHHHHHHHHHHHHHHHHHhcCCcccccCCCCCceEEcCCc-eEEEeccccchhcc
Q psy6828 95 -----DIMEN-EDVKLDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLVDSRW-VVKLADFGLTEFKR 159 (392)
Q Consensus 95 -----~~l~~-~~~~l~~~~~~~i~~qi~~~l~ylH~~~iiiHrDlKp~NIll~~~~-~~kl~DFGla~~~~ 159 (392)
+++.. ....+++..+..++.|++.||.|||+.++ +|+||||+||++++++ .+|++|||.+....
T Consensus 83 ~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~i-~H~dl~~~nil~~~~~~~~~l~d~~~~~~~~ 153 (257)
T cd08225 83 GGDLMKRINRQRGVLFSEDQILSWFVQISLGLKHIHDRKI-LHRDIKSQNIFLSKNGMVAKLGDFGIARQLN 153 (257)
T ss_pred CCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHCCc-ccccCCHHHEEEcCCCCeEEecccccchhcc
Confidence 22221 22257899999999999999999999999 9999999999998885 46999999887543
No 394
>KOG0596|consensus
Probab=99.66 E-value=6.2e-17 Score=154.76 Aligned_cols=154 Identities=16% Similarity=0.199 Sum_probs=113.6
Q ss_pred eeeccCCCCCcceeEEEEEEEeecCcEEEEEEcCCC--ChhHHHHHHHHHHH----------------------------
Q psy6828 45 VSLSSNPDSDFRYSAIFTPIGIYKGRIFAIKRIPKK--SVDITRAMKKELKI---------------------------- 94 (392)
Q Consensus 45 ~~~~~~~lg~G~~g~V~~~~~~~~~~~vAiK~~~~~--~~~~~~~~~~E~~~---------------------------- 94 (392)
.|...++||+||-++||++. ..+.+.||+|++... ..+...-+.+|+..
T Consensus 362 ~Yeilk~iG~GGSSkV~kV~-~s~~~iyalkkv~~~~~D~qtl~gy~nEI~lL~KLkg~~~IIqL~DYEv~d~~lYmvmE 440 (677)
T KOG0596|consen 362 EYEILKQIGSGGSSKVFKVL-NSDKQIYALKKVVLLEADNQTLDGYRNEIALLNKLKGHDKIIQLYDYEVTDGYLYMVME 440 (677)
T ss_pred hhhHHHhhcCCCcceeeeee-cCCCcchhhhHHHHhhcCHHHHHHHHHHHHHHHHhcCCceEEEEeeeeccCceEEEEee
Confidence 34557789999999999997 445567888877533 23556678888887
Q ss_pred -------HHhhcCCcCCCHHHHHHHHHHHHHHHHHHhcCCcccccCCCCCceEEcCCceEEEeccccchhcccccccccc
Q psy6828 95 -------DIMENEDVKLDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLVDSRWVVKLADFGLTEFKRDAEYTGTD 167 (392)
Q Consensus 95 -------~~l~~~~~~l~~~~~~~i~~qi~~~l~ylH~~~iiiHrDlKp~NIll~~~~~~kl~DFGla~~~~~~~~~~~d 167 (392)
.+++.+....+.-.++.+..|++.++.++|++|| ||.||||.|+|+ -.|.+||+|||+|..+..+......
T Consensus 441 ~Gd~DL~kiL~k~~~~~~~~~lk~ywkqML~aV~~IH~~gI-VHSDLKPANFLl-VkG~LKLIDFGIA~aI~~DTTsI~k 518 (677)
T KOG0596|consen 441 CGDIDLNKILKKKKSIDPDWFLKFYWKQMLLAVKTIHQHGI-VHSDLKPANFLL-VKGRLKLIDFGIANAIQPDTTSIVK 518 (677)
T ss_pred cccccHHHHHHhccCCCchHHHHHHHHHHHHHHHHHHHhce-eecCCCcccEEE-EeeeEEeeeechhcccCccccceee
Confidence 4555555455545889999999999999999999 999999999998 5589999999999988765543333
Q ss_pred ccceeeeeeeccCCCC---------------cccccccccchhhhccCC
Q psy6828 168 QHSFLQHTYHVNRAGS---------------TESLHCKCDEALLFEMLP 201 (392)
Q Consensus 168 ~~s~g~~~~~~~~~~~---------------~~~~d~~~~~~lL~~~lp 201 (392)
--..|++-|+.||... ..+.|+|+++++|++|+.
T Consensus 519 dsQvGT~NYMsPEAl~~~~s~~~~~~~k~Ki~r~SDvWSLGCILYqMvY 567 (677)
T KOG0596|consen 519 DSQVGTVNYMSPEALTDMSSSRENGKSKIKISRKSDVWSLGCILYQMVY 567 (677)
T ss_pred ccccCcccccCHHHHhhccccccCCCcceeecCccchhhhhhHHHHHHh
Confidence 3345777777655111 124566777777777763
No 395
>cd07852 STKc_MAPK15 Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase 15. Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 15 (MAPK15) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK15 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. Human MAPK15 is also called Extracellular signal Regulated Kinase 8 (ERK8) while the rat protein is called ERK7. ERK7 and ERK8 display both similar and different biochemical properties. They autophosphorylate and activate themselves and do not require upstream activating kinases. ERK7 is constitutively active and is not affected by extracellular stimul
Probab=99.66 E-value=3.9e-16 Score=149.14 Aligned_cols=113 Identities=22% Similarity=0.321 Sum_probs=90.0
Q ss_pred ceeeeccCCCCCcceeEEEEEEEeecCcEEEEEEcCCCC--hhHHHHHHHHHHH--------------------------
Q psy6828 43 SQVSLSSNPDSDFRYSAIFTPIGIYKGRIFAIKRIPKKS--VDITRAMKKELKI-------------------------- 94 (392)
Q Consensus 43 ~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~--~~~~~~~~~E~~~-------------------------- 94 (392)
.+.|...+.+|+|+||.||+|.+..+++.+|+|.+.+.. ......+.+|+.+
T Consensus 6 ~~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~vK~~~~~~~~~~~~~~~~~E~~~l~~l~~h~ni~~~~~~~~~~~~~~~~ 85 (337)
T cd07852 6 LRKYEILQKLGKGAYGIVWKAIDRRTKEVVALKKIFDAFRNATDAQRTFREIMFLQELGDHPNIVKLLNVIKAENDKDIY 85 (337)
T ss_pred hhHHHHhHhhcCCCCeeEEEEEEcCCCeEEEEEeeccccCcchhhhhhhHHHHHHHHhcCCCCccceeeeeccCCCceEE
Confidence 344566778999999999999998899999999886432 2223344455544
Q ss_pred ---H--------HhhcCCcCCCHHHHHHHHHHHHHHHHHHhcCCcccccCCCCCceEEcCCceEEEeccccchhc
Q psy6828 95 ---D--------IMENEDVKLDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLVDSRWVVKLADFGLTEFK 158 (392)
Q Consensus 95 ---~--------~l~~~~~~l~~~~~~~i~~qi~~~l~ylH~~~iiiHrDlKp~NIll~~~~~~kl~DFGla~~~ 158 (392)
+ ++.. ..+++.....++.|++.||.|||++++ +||||||+||+++.++.+||+|||++...
T Consensus 86 lv~e~~~~~L~~~~~~--~~~~~~~~~~i~~qi~~~L~~LH~~~i-~H~dl~p~nill~~~~~~kl~d~g~~~~~ 157 (337)
T cd07852 86 LVFEYMETDLHAVIRA--NILEDVHKRYIMYQLLKALKYIHSGNV-IHRDLKPSNILLNSDCRVKLADFGLARSL 157 (337)
T ss_pred EEecccccCHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHCCe-ecCCCCHHHEEEcCCCcEEEeeccchhcc
Confidence 1 1111 157888889999999999999999999 99999999999999999999999998754
No 396
>cd05044 PTKc_c-ros Catalytic domain of the Protein Tyrosine Kinase, C-ros. Protein Tyrosine Kinases (PTK) family; C-ros and Drosophila Sevenless proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The proto-oncogene c-ros encodes an orphan receptor tyr kinase (RTK) with an unknown ligand. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. C-ros is expressed in embryonic cells of the kidney, intestine and lung, but disappears soon after birth. It persists only in the adult epididymis. Male
Probab=99.65 E-value=3.7e-16 Score=144.05 Aligned_cols=108 Identities=23% Similarity=0.325 Sum_probs=85.7
Q ss_pred CCCCCcceeEEEEEEEeecC------cEEEEEEcCCCCh-hHHHHHHHHHHH----------------------------
Q psy6828 50 NPDSDFRYSAIFTPIGIYKG------RIFAIKRIPKKSV-DITRAMKKELKI---------------------------- 94 (392)
Q Consensus 50 ~~lg~G~~g~V~~~~~~~~~------~~vAiK~~~~~~~-~~~~~~~~E~~~---------------------------- 94 (392)
+.+|+|+||.||++...... +.+|+|.+.+... .....+.+|+.+
T Consensus 1 ~~lg~g~~g~vy~~~~~~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~ 80 (269)
T cd05044 1 NFLGSGAFGEVYEGTATDILGPGSGPIRVAVKTLRKGATDQEKKEFLKEAHLMSNFNHPNIVKLLGVCLLNEPQYIIMEL 80 (269)
T ss_pred CccccccceeEEeeeecccccCcccceeehhhhhhcccchhhHHHHHHHHHHHHhcCCCCeeeEeeeecCCCCeEEEEec
Confidence 36899999999999876543 6899999865432 345567777666
Q ss_pred -------HHhhc------CCcCCCHHHHHHHHHHHHHHHHHHhcCCcccccCCCCCceEEcCCc-----eEEEeccccch
Q psy6828 95 -------DIMEN------EDVKLDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLVDSRW-----VVKLADFGLTE 156 (392)
Q Consensus 95 -------~~l~~------~~~~l~~~~~~~i~~qi~~~l~ylH~~~iiiHrDlKp~NIll~~~~-----~~kl~DFGla~ 156 (392)
+++.. ....+++.++..++.|++.||.|||++++ +|+||||+||+++.++ .+|++|||+++
T Consensus 81 ~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~i-~H~dl~p~nil~~~~~~~~~~~~~l~dfg~~~ 159 (269)
T cd05044 81 MEGGDLLSYLRDARVERFGPPLLTLKELLDICLDVAKGCVYLEQMHF-IHRDLAARNCLVSEKGYDADRVVKIGDFGLAR 159 (269)
T ss_pred cCCCcHHHHHHHhhhcccCCccccHHHHHHHHHHHHHHHHHHHhCCc-ccCCCChheEEEecCCCCCCcceEECCccccc
Confidence 22221 11237888999999999999999999999 9999999999999877 89999999987
Q ss_pred hc
Q psy6828 157 FK 158 (392)
Q Consensus 157 ~~ 158 (392)
..
T Consensus 160 ~~ 161 (269)
T cd05044 160 DI 161 (269)
T ss_pred cc
Confidence 54
No 397
>cd08530 STKc_CNK2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii CNK2, and similar domains. Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii Never In Mitosis gene A (NIMA)-related kinase 1 (CNK2)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii CNK2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes CNK1, and -2. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii CNK2 has both cilliary and cell cycle functions. It influences flagellar length through promoting flagellar disassembly, an
Probab=99.65 E-value=4e-16 Score=142.47 Aligned_cols=113 Identities=19% Similarity=0.344 Sum_probs=90.9
Q ss_pred eccCCCCCcceeEEEEEEEeecCcEEEEEEcCCCCh--hHHHHHHHHHHH--------------------------HH--
Q psy6828 47 LSSNPDSDFRYSAIFTPIGIYKGRIFAIKRIPKKSV--DITRAMKKELKI--------------------------DI-- 96 (392)
Q Consensus 47 ~~~~~lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~~--~~~~~~~~E~~~--------------------------~~-- 96 (392)
...+.+|+|+||.||++.+..+++.+|+|.+..... .....+.+|+.+ ++
T Consensus 3 ~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~~~ 82 (256)
T cd08530 3 KVLKKLGKGSYGSVYKVKRLSDNQFYALKEVDLGSMSQKEREDAVNEIRILASVNHPNIISYKEAFLDGNKLCIVMEYAP 82 (256)
T ss_pred eEeeeecCCCceeEEEEEECCCCCEEEEEEEehhhccHHHHHHHHHHHHHHHhCCCCCchhhhhhhccCCEEEEEehhcC
Confidence 345679999999999999999999999999875432 233455666654 22
Q ss_pred -------hhc---CCcCCCHHHHHHHHHHHHHHHHHHhcCCcccccCCCCCceEEcCCceEEEeccccchhccc
Q psy6828 97 -------MEN---EDVKLDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLVDSRWVVKLADFGLTEFKRD 160 (392)
Q Consensus 97 -------l~~---~~~~l~~~~~~~i~~qi~~~l~ylH~~~iiiHrDlKp~NIll~~~~~~kl~DFGla~~~~~ 160 (392)
+.. ....+++..+..++.|++.||.|||+.++ +|+||||+||+++.++.+|++|||+++....
T Consensus 83 ~~~L~~~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lh~~~i-~h~~l~~~ni~~~~~~~~kl~d~g~~~~~~~ 155 (256)
T cd08530 83 FGDLSKAISKRKKKRKLIPEQEIWRIFIQLLRGLQALHEQKI-LHRDLKSANILLVANDLVKIGDLGISKVLKK 155 (256)
T ss_pred CCCHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHhhCCc-ccCCCCcceEEEecCCcEEEeeccchhhhcc
Confidence 211 11358889999999999999999999999 9999999999999999999999999876543
No 398
>cd07856 STKc_Sty1_Hog1 Catalytic domain of the Serine/Threonine Kinases, Fungal Mitogen-Activated Protein Kinases Sty1 and Hog1. Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) Sty1/Hog1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sty1/Hog1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs Sty1 from Schizosaccharomyces pombe, Hog1 from Saccharomyces cerevisiae, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. Sty1 and Hog1 are stress-activated MAPKs that partipate in transcriptional regulation in response to stress. Sty1 is activated in response to oxidative stress, osmotic stress, and U
Probab=99.65 E-value=7.7e-16 Score=146.68 Aligned_cols=116 Identities=26% Similarity=0.447 Sum_probs=93.3
Q ss_pred cceeeeccCCCCCcceeEEEEEEEeecCcEEEEEEcCCCCh--hHHHHHHHHHHH-------------------------
Q psy6828 42 TSQVSLSSNPDSDFRYSAIFTPIGIYKGRIFAIKRIPKKSV--DITRAMKKELKI------------------------- 94 (392)
Q Consensus 42 ~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~~--~~~~~~~~E~~~------------------------- 94 (392)
....|...+.||+|+||.||++.+..+++.||+|.+.+... ...+.+.+|+.+
T Consensus 8 ~~~~y~~~~~ig~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~l 87 (328)
T cd07856 8 ITNRYVDLQPVGMGAFGLVCSARDQLTGQNVAIKKIMKPFSTPVLAKRTYRELKLLKHLRHENIISLSDIFISPLEDIYF 87 (328)
T ss_pred cccceEEEEeecccCCeEEEEEEECCCCCEEEEEEecccccccchhHHHHHHHHHHHhcCCCCeeeEeeeEecCCCcEEE
Confidence 44567778899999999999999999999999998865322 234556667665
Q ss_pred --HHhhc------CCcCCCHHHHHHHHHHHHHHHHHHhcCCcccccCCCCCceEEcCCceEEEeccccchhc
Q psy6828 95 --DIMEN------EDVKLDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLVDSRWVVKLADFGLTEFK 158 (392)
Q Consensus 95 --~~l~~------~~~~l~~~~~~~i~~qi~~~l~ylH~~~iiiHrDlKp~NIll~~~~~~kl~DFGla~~~ 158 (392)
+++.. ....+++..+..++.|+++||.|||++++ +||||||+||+++.++.+||+|||++...
T Consensus 88 v~e~~~~~L~~~~~~~~~~~~~~~~~~~ql~~aL~~LH~~~i-iH~dl~p~Nili~~~~~~~l~dfg~~~~~ 158 (328)
T cd07856 88 VTELLGTDLHRLLTSRPLEKQFIQYFLYQILRGLKYVHSAGV-VHRDLKPSNILINENCDLKICDFGLARIQ 158 (328)
T ss_pred EeehhccCHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCc-ccCCCCHHHEeECCCCCEEeCcccccccc
Confidence 11110 11257888889999999999999999999 99999999999999999999999988753
No 399
>KOG0695|consensus
Probab=99.65 E-value=5.3e-17 Score=146.67 Aligned_cols=152 Identities=19% Similarity=0.184 Sum_probs=108.4
Q ss_pred eeccCCCCCcceeEEEEEEEeecCcEEEEEEcCCCCh---hHHHHHHHHHHH---------------------------H
Q psy6828 46 SLSSNPDSDFRYSAIFTPIGIYKGRIFAIKRIPKKSV---DITRAMKKELKI---------------------------D 95 (392)
Q Consensus 46 ~~~~~~lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~~---~~~~~~~~E~~~---------------------------~ 95 (392)
+...+.+|+|+|.+|.+++++.+.+.||+|++++.-. +..+..+.|-.. +
T Consensus 252 f~ll~vigrgsyakvl~~~~~~t~qiyamkvvkkel~nddedidwvqtek~vfe~asn~pflvglhscfqtesrlffvie 331 (593)
T KOG0695|consen 252 FDLLRVIGRGSYAKVLLVRLKKTDQIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNNPFLVGLHSCFQTESRLFFVIE 331 (593)
T ss_pred ceeeeeecCcchhhhhheehcccceeeehhhHHHHhcCCcccchhHHhhHHHHHhccCCCeEEehhhhhcccceEEEEEE
Confidence 3446789999999999999999999999999976533 222233333333 2
Q ss_pred Hhhc--------CCcCCCHHHHHHHHHHHHHHHHHHhcCCcccccCCCCCceEEcCCceEEEeccccchhcccccccccc
Q psy6828 96 IMEN--------EDVKLDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLVDSRWVVKLADFGLTEFKRDAEYTGTD 167 (392)
Q Consensus 96 ~l~~--------~~~~l~~~~~~~i~~qi~~~l~ylH~~~iiiHrDlKp~NIll~~~~~~kl~DFGla~~~~~~~~~~~d 167 (392)
|... .+.+++++.++.+-.+|+.||.|||+.|| |.||||.+|+|++..|++||+|+|.++.--....+ .
T Consensus 332 yv~ggdlmfhmqrqrklpeeharfys~ei~lal~flh~rgi-iyrdlkldnvlldaeghikltdygmcke~l~~gd~--t 408 (593)
T KOG0695|consen 332 YVNGGDLMFHMQRQRKLPEEHARFYSAEICLALNFLHERGI-IYRDLKLDNVLLDAEGHIKLTDYGMCKEGLGPGDT--T 408 (593)
T ss_pred EecCcceeeehhhhhcCcHHHhhhhhHHHHHHHHHHhhcCe-eeeeccccceEEccCCceeecccchhhcCCCCCcc--c
Confidence 2222 23379999999999999999999999999 99999999999999999999999999853222111 1
Q ss_pred ccceeeeeeeccC----CCCcccccccccchhhhccC
Q psy6828 168 QHSFLQHTYHVNR----AGSTESLHCKCDEALLFEML 200 (392)
Q Consensus 168 ~~s~g~~~~~~~~----~~~~~~~d~~~~~~lL~~~l 200 (392)
....|++-|.+|+ -.+.-++|+|.++.++..|+
T Consensus 409 stfcgtpnyiapeilrgeeygfsvdwwalgvlmfemm 445 (593)
T KOG0695|consen 409 STFCGTPNYIAPEILRGEEYGFSVDWWALGVLMFEMM 445 (593)
T ss_pred ccccCCCcccchhhhcccccCceehHHHHHHHHHHHH
Confidence 1123555555444 22233556666666555554
No 400
>cd05583 STKc_MSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase. Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, in response to various stimuli such as growth factors, hormones, neurotransmitters, cellular stress, and pro-inflammatory cytokines
Probab=99.65 E-value=2.7e-16 Score=146.66 Aligned_cols=109 Identities=21% Similarity=0.319 Sum_probs=86.2
Q ss_pred cCCCCCcceeEEEEEEEe---ecCcEEEEEEcCCCCh----hHHHHHHHHHHH---------------------------
Q psy6828 49 SNPDSDFRYSAIFTPIGI---YKGRIFAIKRIPKKSV----DITRAMKKELKI--------------------------- 94 (392)
Q Consensus 49 ~~~lg~G~~g~V~~~~~~---~~~~~vAiK~~~~~~~----~~~~~~~~E~~~--------------------------- 94 (392)
.+.||+|+||.||++.+. .+++.||||.+.+... ...+.+.+|+.+
T Consensus 5 ~~~ig~G~~~~vy~~~~~~~~~~~~~~avk~~~~~~~~~~~~~~~~~~~E~~~l~~~~~~~~i~~~~~~~~~~~~~~lv~ 84 (288)
T cd05583 5 LRVLGTGAYGKVFLVRKVGGHDAGKLYAMKVLKKATIVQKAKTAEHTRTERQVLEAVRRCPFLVTLHYAFQTDTKLHLIL 84 (288)
T ss_pred EEEeccCCCceEEEEEEeccccCCcEEEEEEEehHHHHhhhhHHHHHHHHHHHHHhccCCcchhhhheeeecCCEEEEEE
Confidence 456999999999999854 4678999999875422 233455666654
Q ss_pred HHhhc--------CCcCCCHHHHHHHHHHHHHHHHHHhcCCcccccCCCCCceEEcCCceEEEeccccchhc
Q psy6828 95 DIMEN--------EDVKLDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLVDSRWVVKLADFGLTEFK 158 (392)
Q Consensus 95 ~~l~~--------~~~~l~~~~~~~i~~qi~~~l~ylH~~~iiiHrDlKp~NIll~~~~~~kl~DFGla~~~ 158 (392)
+++.. ....+++..+..++.|++.+|.|||+.++ +||||||+||+++.++.++++|||+++..
T Consensus 85 e~~~~~~L~~~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~~~-~H~dl~p~nil~~~~~~~~l~dfg~~~~~ 155 (288)
T cd05583 85 DYVNGGELFTHLYQREHFTESEVRVYIAEIVLALDHLHQLGI-IYRDIKLENILLDSEGHVVLTDFGLSKEF 155 (288)
T ss_pred ecCCCCcHHHHHhhcCCcCHHHHHHHHHHHHHHHHHHHHCCe-eccCCCHHHeEECCCCCEEEEECcccccc
Confidence 12211 12358899999999999999999999999 99999999999999999999999998754
No 401
>KOG0665|consensus
Probab=99.64 E-value=1.6e-16 Score=142.81 Aligned_cols=133 Identities=23% Similarity=0.300 Sum_probs=102.6
Q ss_pred ceeeeccCCCCCcceeEEEEEEEeecCcEEEEEEcCCCCh--hHHHHHHHHHHH--------------------------
Q psy6828 43 SQVSLSSNPDSDFRYSAIFTPIGIYKGRIFAIKRIPKKSV--DITRAMKKELKI-------------------------- 94 (392)
Q Consensus 43 ~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~~--~~~~~~~~E~~~-------------------------- 94 (392)
..+|....++|.|.- .|..+.+.-+++.||+|++..... ...++..+|...
T Consensus 16 ~~Ry~nL~p~~~g~~-~v~~a~D~v~~~~v~ikk~~~pf~n~~~akra~rel~l~~~v~~~nii~l~n~ftP~~~l~~~~ 94 (369)
T KOG0665|consen 16 PKRYVNLKPIGSGAQ-IVVAAFDQVLGRPVAIKKLSRPFQNQTHAKRAYRELKLMKCVNHKNIISLLNVFTPQKTLEEFQ 94 (369)
T ss_pred eeeeeeecccCCCCc-eEEecchhhccCceehhhhcCccccCccchhhhhhhhhhhhhcccceeeeeeccCccccHHHHH
Confidence 456777889999988 888898889999999999865422 223344455544
Q ss_pred ------HHhhc-----CCcCCCHHHHHHHHHHHHHHHHHHhcCCcccccCCCCCceEEcCCceEEEeccccchhcccccc
Q psy6828 95 ------DIMEN-----EDVKLDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLVDSRWVVKLADFGLTEFKRDAEY 163 (392)
Q Consensus 95 ------~~l~~-----~~~~l~~~~~~~i~~qi~~~l~ylH~~~iiiHrDlKp~NIll~~~~~~kl~DFGla~~~~~~~~ 163 (392)
+++.. ....++.+.+..++.|+++|++|+|+.+| +||||||+||++..++.+||.|||+++.......
T Consensus 95 e~y~v~e~m~~nl~~vi~~elDH~tis~i~yq~~~~ik~lhs~~I-ihRdLkPsnivv~~~~~lKi~dfg~ar~e~~~~~ 173 (369)
T KOG0665|consen 95 EVYLVMELMDANLCQVILMELDHETISYILYQMLCGIKHLHSAGI-IHRDLKPSNIVVNSDCTLKILDFGLARTEDTDFM 173 (369)
T ss_pred hHHHHHHhhhhHHHHHHHHhcchHHHHHHHHHHHHHHHHHHhcce-eecccCcccceecchhheeeccchhhcccCcccc
Confidence 11110 11258888999999999999999999999 9999999999999999999999999986544411
Q ss_pred ----------------------ccccccceeeeeee
Q psy6828 164 ----------------------TGTDQHSFLQHTYH 177 (392)
Q Consensus 164 ----------------------~~~d~~s~g~~~~~ 177 (392)
...|+||.||++=|
T Consensus 174 mtpyVvtRyyrapevil~~~~ke~vdiwSvGci~gE 209 (369)
T KOG0665|consen 174 MTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGE 209 (369)
T ss_pred cCchhheeeccCchheeccCCcccchhhhhhhHHHH
Confidence 12299999998877
No 402
>KOG1163|consensus
Probab=99.64 E-value=7.9e-16 Score=133.47 Aligned_cols=115 Identities=23% Similarity=0.254 Sum_probs=92.9
Q ss_pred ceeeeccCCCCCcceeEEEEEEEeecCcEEEEEEcCCCChhHHHHHHHHHHH----------------------------
Q psy6828 43 SQVSLSSNPDSDFRYSAIFTPIGIYKGRIFAIKRIPKKSVDITRAMKKELKI---------------------------- 94 (392)
Q Consensus 43 ~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~~~~~~~~~~E~~~---------------------------- 94 (392)
...|...++||.|+||.+|+|.+..+|+.||||.-+..... ..+..|..+
T Consensus 14 ~gky~lvrkiGsGSFGdIy~~~~i~~ge~VAiK~Es~~a~h--pqL~yEskvY~iL~~g~GiP~i~~y~~e~~ynvlVMd 91 (341)
T KOG1163|consen 14 GGKYKLVRKIGSGSFGDIYLGISITSGEEVAIKLESSKAKH--PQLLYESKVYRILQGGVGIPHIRHYGTEKDYNVLVMD 91 (341)
T ss_pred ccceEEEEeecCCchhheeeeeeccCCceEEEEeecccCCC--cchhHHHHHHHHhccCCCCchhhhhccccccceeeee
Confidence 34567789999999999999999999999999987654321 123333333
Q ss_pred -------HHhhcCCcCCCHHHHHHHHHHHHHHHHHHhcCCcccccCCCCCceEEcCC---ceEEEeccccchhccc
Q psy6828 95 -------DIMENEDVKLDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLVDSR---WVVKLADFGLTEFKRD 160 (392)
Q Consensus 95 -------~~l~~~~~~l~~~~~~~i~~qi~~~l~ylH~~~iiiHrDlKp~NIll~~~---~~~kl~DFGla~~~~~ 160 (392)
++++..+..++.+.+.-++-|++.-++|+|.++. |||||||+|.|..-+ ..+.++|||+|+...+
T Consensus 92 LLGPsLEdLfnfC~R~ftmkTvLMLaDQml~RiEyvH~r~f-iHRDIKPdNFLMGlgrh~~kl~LIDFGLaKky~d 166 (341)
T KOG1163|consen 92 LLGPSLEDLFNFCSRRFTMKTVLMLADQMLSRIEYVHLRNF-IHRDIKPDNFLMGLGRHCNKLYLIDFGLAKKYRD 166 (341)
T ss_pred ccCccHHHHHHHHhhhhhHHhHHHHHHHHHHHHHHHHhhcc-ccccCCccceeeccccccceEEEEeccchhhhcc
Confidence 5555566679999999999999999999999999 999999999999643 5689999999987543
No 403
>cd06606 STKc_MAPKKK Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-Activated Protein Kinase Kinase Kinase. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKKKs (MKKKs or MAP3Ks) are also called MAP/ERK kinase kinases (MEKKs) in some cases. They phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. This subfamily is composed of the Apoptosis Signal-regulating Kinases ASK1 (or MAPKK
Probab=99.63 E-value=1.3e-15 Score=138.82 Aligned_cols=112 Identities=28% Similarity=0.453 Sum_probs=93.8
Q ss_pred ccCCCCCcceeEEEEEEEeecCcEEEEEEcCCCCh--hHHHHHHHHHHH-------------------------------
Q psy6828 48 SSNPDSDFRYSAIFTPIGIYKGRIFAIKRIPKKSV--DITRAMKKELKI------------------------------- 94 (392)
Q Consensus 48 ~~~~lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~~--~~~~~~~~E~~~------------------------------- 94 (392)
..+.+|+|++|.||++.+..+++.|++|.+..... ...+.+.+|+..
T Consensus 4 ~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~lv~e~~ 83 (260)
T cd06606 4 RGELLGRGSFGSVYLALDKDTGELMAVKSVELSGDSEEELEALEREIRILSSLQHPNIVRYYGSERDEEKNTLNIFLEYV 83 (260)
T ss_pred eeeEeeecCceEEEEEEECCCCcEEEEEEeeccccchHHHHHHHHHHHHHHHcCCCCEeeEEEEEecCCCCeEEEEEEec
Confidence 34679999999999999998999999999976653 445667777765
Q ss_pred ------HHhhcCCcCCCHHHHHHHHHHHHHHHHHHhcCCcccccCCCCCceEEcCCceEEEeccccchhcccc
Q psy6828 95 ------DIMENEDVKLDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLVDSRWVVKLADFGLTEFKRDA 161 (392)
Q Consensus 95 ------~~l~~~~~~l~~~~~~~i~~qi~~~l~ylH~~~iiiHrDlKp~NIll~~~~~~kl~DFGla~~~~~~ 161 (392)
+++.+.. .+++..+..++.|++.||.|||+.++ +|+||+|+||+++.++.++|+|||.+......
T Consensus 84 ~~~~L~~~~~~~~-~~~~~~~~~~~~~l~~~l~~lh~~~~-~h~dl~p~ni~i~~~~~~~l~d~~~~~~~~~~ 154 (260)
T cd06606 84 SGGSLSSLLKKFG-KLPEPVIRKYTRQILEGLAYLHSNGI-VHRDIKGANILVDSDGVVKLADFGCAKRLGDI 154 (260)
T ss_pred CCCcHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHHHCCc-cccCCCHHHEEEcCCCCEEEcccccEEecccc
Confidence 2233322 68999999999999999999999999 99999999999999999999999998866543
No 404
>cd08226 PK_STRAD_beta Pseudokinase domain of STE20-related kinase adapter protein beta. Protein Kinase family, STE20-related kinase adapter protein (STRAD) beta subfamily, pseudokinase domain. The STRAD-beta subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpig
Probab=99.63 E-value=1.5e-15 Score=144.70 Aligned_cols=103 Identities=17% Similarity=0.331 Sum_probs=84.1
Q ss_pred CCCc--ceeEEEEEEEeecCcEEEEEEcCCCCh--hHHHHHHHHHHH---------------------------------
Q psy6828 52 DSDF--RYSAIFTPIGIYKGRIFAIKRIPKKSV--DITRAMKKELKI--------------------------------- 94 (392)
Q Consensus 52 lg~G--~~g~V~~~~~~~~~~~vAiK~~~~~~~--~~~~~~~~E~~~--------------------------------- 94 (392)
+|+| +||+||++.+..+|+.||+|.+..... ...+.+.+|+.+
T Consensus 6 ig~g~~~~~~v~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~~~~l~h~niv~~~~~~~~~~~~~~v~e~~~~~~ 85 (328)
T cd08226 6 IGRGFCNLTSVYLARHTPTGTLVTVRITDLENCTEEHLKALQNEVVLSHFFRHPNIMTSWTVFTTGSWLWVISPFMAYGS 85 (328)
T ss_pred hCCcccCceeEEEEEEcCCCcEEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCcceEeeeEecCCceEEEEecccCCC
Confidence 5555 999999999999999999999875432 334567777665
Q ss_pred --HHhhc-CCcCCCHHHHHHHHHHHHHHHHHHhcCCcccccCCCCCceEEcCCceEEEeccccc
Q psy6828 95 --DIMEN-EDVKLDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLVDSRWVVKLADFGLT 155 (392)
Q Consensus 95 --~~l~~-~~~~l~~~~~~~i~~qi~~~l~ylH~~~iiiHrDlKp~NIll~~~~~~kl~DFGla 155 (392)
+++.+ ....+++..+..++.|++.||.|||++++ +||||||+||+++.++.+|++||+.+
T Consensus 86 l~~~l~~~~~~~~~~~~~~~~~~qi~~aL~~lH~~~i-vHrDlkp~Nill~~~~~~~~~~~~~~ 148 (328)
T cd08226 86 ANSLLKTYFPEGMSEALIGNILFGALRGLNYLHQNGY-IHRNIKASHILISGDGLVSLSGLSHL 148 (328)
T ss_pred HHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHHhCCe-ecCCCCHHHEEEeCCCcEEEechHHH
Confidence 22222 12248889999999999999999999999 99999999999999999999999754
No 405
>cd08216 PK_STRAD Pseudokinase domain of STE20-related kinase adapter protein. Protein Kinase family, STE20-related kinase adapter protein (STRAD) subfamily, pseudokinase domain. The STRAD subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpigmentation of the buc
Probab=99.62 E-value=1.2e-15 Score=144.11 Aligned_cols=101 Identities=20% Similarity=0.280 Sum_probs=80.5
Q ss_pred ceeEEEEEEEeecCcEEEEEEcCCCC--hhHHHHHHHHHHH-----------------------------------HHhh
Q psy6828 56 RYSAIFTPIGIYKGRIFAIKRIPKKS--VDITRAMKKELKI-----------------------------------DIME 98 (392)
Q Consensus 56 ~~g~V~~~~~~~~~~~vAiK~~~~~~--~~~~~~~~~E~~~-----------------------------------~~l~ 98 (392)
+++.||.+.+..+++.||+|+++... ....+.+.+|+.+ +++.
T Consensus 12 ~~~~v~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~Ei~~l~~l~h~~i~~~~~~~~~~~~~~~~~e~~~~~~l~~~l~ 91 (314)
T cd08216 12 DLMIVHLAKHKPTNTLVAVKKINLDSCSKEDLKLLQQEIITSRQLQHPNILPYVTSFIVDSELYVVSPLMAYGSCEDLLK 91 (314)
T ss_pred CCceEEEEEecCCCCEEEEEEEeccccchhHHHHHHHHHHHHHhcCCcchhhhhheeecCCeEEEEEeccCCCCHHHHHH
Confidence 44556666666789999999997652 3445667777766 2332
Q ss_pred c-CCcCCCHHHHHHHHHHHHHHHHHHhcCCcccccCCCCCceEEcCCceEEEeccccchh
Q psy6828 99 N-EDVKLDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLVDSRWVVKLADFGLTEF 157 (392)
Q Consensus 99 ~-~~~~l~~~~~~~i~~qi~~~l~ylH~~~iiiHrDlKp~NIll~~~~~~kl~DFGla~~ 157 (392)
. ....+++..+..++.|++.||.|||++++ +||||||+||+++.++.+|++|||.+..
T Consensus 92 ~~~~~~~~~~~~~~~~~~l~~~L~~LH~~~i-vH~dlk~~Nili~~~~~~kl~d~~~~~~ 150 (314)
T cd08216 92 THFPEGLPELAIAFILKDVLNALDYIHSKGF-IHRSVKASHILLSGDGKVVLSGLRYSVS 150 (314)
T ss_pred HhcccCCCHHHHHHHHHHHHHHHHHHHHCCe-ecCCCCcceEEEecCCceEEecCcccee
Confidence 2 12358899999999999999999999999 9999999999999999999999998753
No 406
>KOG1027|consensus
Probab=99.62 E-value=1.7e-16 Score=158.24 Aligned_cols=125 Identities=24% Similarity=0.373 Sum_probs=94.4
Q ss_pred eccCCCCCccee-EEEEEEEeecCcEEEEEEcCCCChhHHHHHHHHHHH-------------------------------
Q psy6828 47 LSSNPDSDFRYS-AIFTPIGIYKGRIFAIKRIPKKSVDITRAMKKELKI------------------------------- 94 (392)
Q Consensus 47 ~~~~~lg~G~~g-~V~~~~~~~~~~~vAiK~~~~~~~~~~~~~~~E~~~------------------------------- 94 (392)
...+.+|.|+-| .||+|. ..|+.||||.+-.. ......+|+..
T Consensus 512 ~~~eilG~Gs~Gt~Vf~G~--ye~R~VAVKrll~e---~~~~A~rEi~lL~eSD~H~NviRyyc~E~d~qF~YIalELC~ 586 (903)
T KOG1027|consen 512 SPKEILGYGSNGTVVFRGV--YEGREVAVKRLLEE---FFDFAQREIQLLQESDEHPNVIRYYCSEQDRQFLYIALELCA 586 (903)
T ss_pred ccHHHcccCCCCcEEEEEe--eCCceehHHHHhhH---hHHHHHHHHHHHHhccCCCceEEEEeeccCCceEEEEehHhh
Confidence 446678899887 468885 66999999998543 33456677776
Q ss_pred ----HHhhcC--CcCC-CHHHHHHHHHHHHHHHHHHhcCCcccccCCCCCceEEcC---C--ceEEEeccccchhccccc
Q psy6828 95 ----DIMENE--DVKL-DNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLVDS---R--WVVKLADFGLTEFKRDAE 162 (392)
Q Consensus 95 ----~~l~~~--~~~l-~~~~~~~i~~qi~~~l~ylH~~~iiiHrDlKp~NIll~~---~--~~~kl~DFGla~~~~~~~ 162 (392)
++++.. +... ........+.|+++||++||+.++ +||||||.||||.. + ..++|+|||+|+.+..+.
T Consensus 587 ~sL~dlie~~~~d~~~~~~i~~~~~l~q~~~GlaHLHsl~i-VHRDLkPQNILI~~~~~~~~~ra~iSDfglsKkl~~~~ 665 (903)
T KOG1027|consen 587 CSLQDLIESSGLDVEMQSDIDPISVLSQIASGLAHLHSLKI-VHRDLKPQNILISVPSADGTLRAKISDFGLSKKLAGGK 665 (903)
T ss_pred hhHHHHHhccccchhhcccccHHHHHHHHHHHHHHHHhccc-ccccCCCceEEEEccCCCcceeEEecccccccccCCCc
Confidence 666663 1111 114567889999999999999999 99999999999976 3 468999999999764432
Q ss_pred c--------------------------ccccccceeeeeee
Q psy6828 163 Y--------------------------TGTDQHSFLQHTYH 177 (392)
Q Consensus 163 ~--------------------------~~~d~~s~g~~~~~ 177 (392)
. ...|++|+||++|.
T Consensus 666 sS~~r~s~~sGt~GW~APE~L~~~~~~~avDiFslGCvfyY 706 (903)
T KOG1027|consen 666 SSFSRLSGGSGTSGWQAPEQLREDRKTQAVDIFSLGCVFYY 706 (903)
T ss_pred chhhcccCCCCcccccCHHHHhccccCcccchhhcCceEEE
Confidence 1 12399999999998
No 407
>KOG1165|consensus
Probab=99.60 E-value=7.9e-15 Score=132.72 Aligned_cols=114 Identities=20% Similarity=0.358 Sum_probs=93.7
Q ss_pred eeccCCCCCcceeEEEEEEEeecCcEEEEEEcCCCChhHHHHHHHHHHH-------------------------------
Q psy6828 46 SLSSNPDSDFRYSAIFTPIGIYKGRIFAIKRIPKKSVDITRAMKKELKI------------------------------- 94 (392)
Q Consensus 46 ~~~~~~lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~~~~~~~~~~E~~~------------------------------- 94 (392)
|..++.||+|+||+.+.|.+..+++.||||.-+.++.. -.+..|...
T Consensus 30 yrVGkKIGeGsFG~lf~G~Nl~nne~VAIKfEPrkS~A--PQLrdEYr~YKlL~g~~GIP~vYYFGqeG~~NiLVidLLG 107 (449)
T KOG1165|consen 30 YRVGKKIGEGSFGVLFLGKNLYNNEPVAIKFEPRKSEA--PQLRDEYRTYKLLGGTEGIPQVYYFGQEGKYNILVIDLLG 107 (449)
T ss_pred ceeccccccCcceeeecccccccCceEEEEeccccCCc--chHHHHHHHHHHHcCCCCCCceeeeccccchhhhhhhhhC
Confidence 56789999999999999999999999999987655431 112222222
Q ss_pred ----HHhhcCCcCCCHHHHHHHHHHHHHHHHHHhcCCcccccCCCCCceEEcCC-----ceEEEeccccchhccccc
Q psy6828 95 ----DIMENEDVKLDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLVDSR-----WVVKLADFGLTEFKRDAE 162 (392)
Q Consensus 95 ----~~l~~~~~~l~~~~~~~i~~qi~~~l~ylH~~~iiiHrDlKp~NIll~~~-----~~~kl~DFGla~~~~~~~ 162 (392)
|++.-.+..|+-+.+..++.|++.-++|+|++.. |.|||||+|+||... ..+.++|||+++...+..
T Consensus 108 PSLEDLFD~CgR~FSvKTV~miA~Qmi~rie~vH~k~L-IYRDIKPdNFLIGrp~~k~~n~IhiiDFGmAK~YrDp~ 183 (449)
T KOG1165|consen 108 PSLEDLFDLCGRRFSVKTVAMIAKQMITRIEYVHEKDL-IYRDIKPDNFLIGRPGTKDANVIHIIDFGMAKEYRDPK 183 (449)
T ss_pred cCHHHHHHHhcCcccHHhHHHHHHHHHHHHHHHHhcce-eecccCccceeecCCCCCCCceEEEEeccchhhhcCcc
Confidence 6666667789999999999999999999999999 999999999999654 358999999999876543
No 408
>smart00090 RIO RIO-like kinase.
Probab=99.59 E-value=5.4e-15 Score=133.81 Aligned_cols=113 Identities=21% Similarity=0.175 Sum_probs=85.2
Q ss_pred eeccCCCCCcceeEEEEEE-EeecCcEEEEEEcCCCChh------------------------HHHHHHHHHHH------
Q psy6828 46 SLSSNPDSDFRYSAIFTPI-GIYKGRIFAIKRIPKKSVD------------------------ITRAMKKELKI------ 94 (392)
Q Consensus 46 ~~~~~~lg~G~~g~V~~~~-~~~~~~~vAiK~~~~~~~~------------------------~~~~~~~E~~~------ 94 (392)
|....+||+|+||.||+|. +..+|+.||+|+++..... ....+.+|...
T Consensus 30 ~~i~~~Lg~G~~g~Vy~a~~~~~~g~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~L~~L~~ 109 (237)
T smart00090 30 SAIGGCISTGKEANVYHALDFDGSGKERAVKIYRTGTLEFKRRDRYVDGDFRFKYRKINPRKLVRLWAEKEFRNLQRLYE 109 (237)
T ss_pred HHhCCeeccCcceeEEEEEecCCCCcEEEEEEEEcCcceecchhhhcccchhhccCCCCHHHHHHHHHHHHHHHHHHHHh
Confidence 4557789999999999998 6778999999998753210 01223455554
Q ss_pred ------------------HHhhc--------CCcCCCHHHHHHHHHHHHHHHHHHhcCC-cccccCCCCCceEEcCCceE
Q psy6828 95 ------------------DIMEN--------EDVKLDNMFIASLVADILRGMLYLHDSA-LRYHGNLKASNCLVDSRWVV 147 (392)
Q Consensus 95 ------------------~~l~~--------~~~~l~~~~~~~i~~qi~~~l~ylH~~~-iiiHrDlKp~NIll~~~~~~ 147 (392)
+++.. ....++..++..++.|++.++.|||+++ + +||||||+||+++ ++.+
T Consensus 110 ~~i~~p~~~~~~~~~lV~E~~~g~~L~~~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~g~i-iH~Dikp~NIli~-~~~i 187 (237)
T smart00090 110 AGVPVPKPIAWRRNVLVMEFIGGDGLPAPRLKDVEPEEEEEFELYDDILEEMRKLYKEGEL-VHGDLSEYNILVH-DGKV 187 (237)
T ss_pred cCCCCCeeeEecCceEEEEEecCCcccccccccCCcchHHHHHHHHHHHHHHHHHHhcCCE-EeCCCChhhEEEE-CCCE
Confidence 11111 1113455567899999999999999999 9 9999999999999 8899
Q ss_pred EEeccccchhccc
Q psy6828 148 KLADFGLTEFKRD 160 (392)
Q Consensus 148 kl~DFGla~~~~~ 160 (392)
+++|||.+.....
T Consensus 188 ~LiDFg~a~~~~~ 200 (237)
T smart00090 188 VIIDVSQSVELDH 200 (237)
T ss_pred EEEEChhhhccCC
Confidence 9999999876544
No 409
>KOG0587|consensus
Probab=99.58 E-value=7.5e-15 Score=147.35 Aligned_cols=132 Identities=22% Similarity=0.323 Sum_probs=104.7
Q ss_pred eeeeccCCCCCcceeEEEEEEEeecCcEEEEEEcCCCChhHHHHHHHHHHH-----------------------------
Q psy6828 44 QVSLSSNPDSDFRYSAIFTPIGIYKGRIFAIKRIPKKSVDITRAMKKELKI----------------------------- 94 (392)
Q Consensus 44 ~~~~~~~~lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~~~~~~~~~~E~~~----------------------------- 94 (392)
........+|+|.+|.||++.++.+++..|+|++....- ..+.+.-|.++
T Consensus 19 d~~ei~evig~Gtygkv~k~k~~~~~~~aa~kI~~~~~d-~deEiE~eynil~~~~~hpnv~~fyg~~~k~~~~~~DqLW 97 (953)
T KOG0587|consen 19 DIFEIIEVIGNGTYGKVYKGRHVKTGQLAAIKIMDPTED-EEEEIELEYNMLKKYSHHPNVATFYGAFIKKDPGNGDQLW 97 (953)
T ss_pred CccEEEEEEeeccceeEEEEeeeecCceeeeEeecCCcc-ccHHHHHHHHHHHhccCCCCcceEEEEEEEecCCCCCeEE
Confidence 334445679999999999999999999999999976532 23444445444
Q ss_pred ------------HHhhc-CCcCCCHHHHHHHHHHHHHHHHHHhcCCcccccCCCCCceEEcCCceEEEeccccchhcccc
Q psy6828 95 ------------DIMEN-EDVKLDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLVDSRWVVKLADFGLTEFKRDA 161 (392)
Q Consensus 95 ------------~~l~~-~~~~l~~~~~~~i~~qi~~~l~ylH~~~iiiHrDlKp~NIll~~~~~~kl~DFGla~~~~~~ 161 (392)
|++++ ...++.|+.+..|+++++.|+.+||.+.+ +|||+|-.|||++.++.+||+|||++..++..
T Consensus 98 LVMEfC~gGSVTDLVKn~~g~rl~E~~IaYI~re~lrgl~HLH~nkv-iHRDikG~NiLLT~e~~VKLvDFGvSaQldsT 176 (953)
T KOG0587|consen 98 LVMEFCGGGSVTDLVKNTKGNRLKEEWIAYILREILRGLAHLHNNKV-IHRDIKGQNVLLTENAEVKLVDFGVSAQLDST 176 (953)
T ss_pred EEeeccCCccHHHHHhhhcccchhhHHHHHHHHHHHHHHHHHhhcce-eeecccCceEEEeccCcEEEeeeeeeeeeecc
Confidence 43332 24479999999999999999999999999 99999999999999999999999999865432
Q ss_pred cc-----c-----------------------cccccceeeeeee
Q psy6828 162 EY-----T-----------------------GTDQHSFLQHTYH 177 (392)
Q Consensus 162 ~~-----~-----------------------~~d~~s~g~~~~~ 177 (392)
.. . ..|+||+|++..|
T Consensus 177 ~grRnT~iGtP~WMAPEViac~e~~d~tyd~R~D~WsLGITaIE 220 (953)
T KOG0587|consen 177 VGRRNTFIGTPYWMAPEVIACDESPDATYDYRSDLWSLGITAIE 220 (953)
T ss_pred cccccCcCCCcccccceeeecccCCCCCcccccchhhccceeeh
Confidence 11 0 1299999999988
No 410
>KOG0200|consensus
Probab=99.58 E-value=8.5e-15 Score=150.00 Aligned_cols=128 Identities=20% Similarity=0.272 Sum_probs=102.3
Q ss_pred cCCCCCcceeEEEEEEEee-------cCcEEEEEEcCCCCh-hHHHHHHHHHHH--------------------------
Q psy6828 49 SNPDSDFRYSAIFTPIGIY-------KGRIFAIKRIPKKSV-DITRAMKKELKI-------------------------- 94 (392)
Q Consensus 49 ~~~lg~G~~g~V~~~~~~~-------~~~~vAiK~~~~~~~-~~~~~~~~E~~~-------------------------- 94 (392)
.+.+|+|.||.|++|.-.. ....||||.++.... ...+.+..|+.+
T Consensus 301 ~~~lg~g~fG~v~~~~~~~~~~~~~~~~~~VaVK~~k~~~~~~~~~~~~~El~~m~~~g~H~niv~llG~~t~~~~~~~v 380 (609)
T KOG0200|consen 301 GKYLGEGAFGQVVKALLFGLSKALLSIYVTVAVKMLKENASSSEKKDLMSELNVLKELGKHPNIVNLLGACTQDGPLYVI 380 (609)
T ss_pred cceeecccccceEeEEEeecccccccceEEEEEEecccccCcHHHHHHHHHHHHHHHhcCCcchhhheeeeccCCceEEE
Confidence 3499999999999997442 135799999975433 456778888887
Q ss_pred ----------HHhhcCC---------------cCCCHHHHHHHHHHHHHHHHHHhcCCcccccCCCCCceEEcCCceEEE
Q psy6828 95 ----------DIMENED---------------VKLDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLVDSRWVVKL 149 (392)
Q Consensus 95 ----------~~l~~~~---------------~~l~~~~~~~i~~qi~~~l~ylH~~~iiiHrDlKp~NIll~~~~~~kl 149 (392)
+|++... ..++..+...+..||+.|++||++++. +||||-..|||++.+..+||
T Consensus 381 ~Ey~~~G~L~~~Lr~~r~~~~~~~~~~~~~~~~~L~~~dLlsfa~QIa~GMe~L~~~~~-vHRDLAaRNVLi~~~~~~kI 459 (609)
T KOG0200|consen 381 VEYAEHGDLLEFLRKKRVTESIDGSGVFPNERDALTTKDLLSFAYQIANGMEYLASVPC-VHRDLAARNVLITKNKVIKI 459 (609)
T ss_pred EEeccCCcHHHHHHhccccccccccCCCccccCCcCHHHHHHHHHHHHHHHHHHhhCCc-cchhhhhhhEEecCCCEEEE
Confidence 4554443 238899999999999999999999999 99999999999999999999
Q ss_pred eccccchhccccc--------------------------cccccccceeeeeee
Q psy6828 150 ADFGLTEFKRDAE--------------------------YTGTDQHSFLQHTYH 177 (392)
Q Consensus 150 ~DFGla~~~~~~~--------------------------~~~~d~~s~g~~~~~ 177 (392)
+|||+++...... ...+|+||||+++||
T Consensus 460 aDFGlar~~~~~~~y~~~~~~~~LP~kWmApEsl~~~~ft~kSDVWSfGI~L~E 513 (609)
T KOG0200|consen 460 ADFGLARDHYNKDYYRTKSSAGTLPVKWMAPESLFDRVFTSKSDVWSFGILLWE 513 (609)
T ss_pred ccccceeccCCCCceEecCCCCccceeecCHHHhccCcccccchhhHHHHHHHH
Confidence 9999998422111 123499999999999
No 411
>cd08222 STKc_Nek11 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 11. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 11 (Nek11) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek11 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek11 is involved, through direct phosphorylation, in regulating the degradation of Cdc25A (Cell Division Cycle 25 homolog A), which plays a role in cell cycle progression and in activating cyclin dependent kinases. Nek11 is activated by CHK1 (CHeckpoint Kinase 1) and may be involved in the G2/M check
Probab=99.58 E-value=5e-15 Score=135.90 Aligned_cols=111 Identities=17% Similarity=0.269 Sum_probs=83.8
Q ss_pred eeccCCCCCcceeEEEEEEEeecCcEEEEEEcCCCCh-----hHHHHHHHHHHH--------------------------
Q psy6828 46 SLSSNPDSDFRYSAIFTPIGIYKGRIFAIKRIPKKSV-----DITRAMKKELKI-------------------------- 94 (392)
Q Consensus 46 ~~~~~~lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~~-----~~~~~~~~E~~~-------------------------- 94 (392)
|...+.+|+|+||.||++.+..++..+++|.++.... .....+.+|..+
T Consensus 2 y~i~~~ig~g~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~ 81 (260)
T cd08222 2 YILQQRLGKGSFGTVYLVKDKKAVAEERLKVLKEIPVGELNPNETVQANQEAQLLSKLDHPAIVKFHASFLERDAFCIIT 81 (260)
T ss_pred ceeeeeecCCCCceEEEEEecCCCCcceEEEeccccccccCcchHHHHHHHHHHHHhCCCCcHHHHHHHHhcCCceEEEE
Confidence 4456789999999999999888777777776653221 122234445443
Q ss_pred ---------HHhh---cCCcCCCHHHHHHHHHHHHHHHHHHhcCCcccccCCCCCceEEcCCceEEEeccccchhc
Q psy6828 95 ---------DIME---NEDVKLDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLVDSRWVVKLADFGLTEFK 158 (392)
Q Consensus 95 ---------~~l~---~~~~~l~~~~~~~i~~qi~~~l~ylH~~~iiiHrDlKp~NIll~~~~~~kl~DFGla~~~ 158 (392)
+++. .....+++.++..++.|++.||.|||+.++ +|+||||+||++++ +.+|++|||+++..
T Consensus 82 e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~i-~h~~l~~~nili~~-~~~~l~d~g~~~~~ 155 (260)
T cd08222 82 EYCEGRDLDCKLEELKHTGKTLSENQVCEWFIQLLLGVHYMHQRRI-LHRDLKAKNIFLKN-NLLKIGDFGVSRLL 155 (260)
T ss_pred EeCCCCCHHHHHHHHhhcccccCHHHHHHHHHHHHHHHHHHHHcCc-cccCCChhheEeec-CCEeecccCceeec
Confidence 1111 122358999999999999999999999999 99999999999975 56999999988754
No 412
>smart00221 STYKc Protein kinase; unclassified specificity. Phosphotransferases. The specificity of this class of kinases can not be predicted. Possible dual-specificity Ser/Thr/Tyr kinase.
Probab=99.57 E-value=8.9e-15 Score=130.57 Aligned_cols=111 Identities=25% Similarity=0.399 Sum_probs=92.1
Q ss_pred cCCCCCcceeEEEEEEEeecCcEEEEEEcCCCChh-HHHHHHHHHHH---------------------------------
Q psy6828 49 SNPDSDFRYSAIFTPIGIYKGRIFAIKRIPKKSVD-ITRAMKKELKI--------------------------------- 94 (392)
Q Consensus 49 ~~~lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~~~-~~~~~~~E~~~--------------------------------- 94 (392)
.+.+|+|++|.||++.+..+++.+|+|.+...... ..+.+.+|+..
T Consensus 4 ~~~i~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~~~~~~~~~i~~~~~~~~~~~~~~~v~e~~~~~~ 83 (225)
T smart00221 4 GKKLGEGAFGKVYLARDKGTGELVAVKVLKKEKTEKQREEFLREIRILKKLKHPNIVKLYGVFEDPEPLYLVMEYCEGGD 83 (225)
T ss_pred eeEeecCCCeEEEEEEEcCCCcEEEEEeeccccchHHHHHHHHHHHHHHhCCCCChhhheeeeecCCceEEEEeccCCCC
Confidence 46789999999999998888999999999876554 56677777665
Q ss_pred --HHhhcCCcCCCHHHHHHHHHHHHHHHHHHhcCCcccccCCCCCceEEcCCceEEEeccccchhccc
Q psy6828 95 --DIMENEDVKLDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLVDSRWVVKLADFGLTEFKRD 160 (392)
Q Consensus 95 --~~l~~~~~~l~~~~~~~i~~qi~~~l~ylH~~~iiiHrDlKp~NIll~~~~~~kl~DFGla~~~~~ 160 (392)
+++......+++..+..++.|++.++.|||++++ +|+|++|+||+++.++.++|+|||++.....
T Consensus 84 L~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~i-~h~di~~~ni~v~~~~~~~l~d~g~~~~~~~ 150 (225)
T smart00221 84 LFDYLRKKGGKLSEEEARFYLRQILEALEYLHSLGI-VHRDLKPENILLGMDGLVKLADFGLARFIHR 150 (225)
T ss_pred HHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHhCCe-ecCCCCHHHEEEcCCCCEEEeeCceeeEecC
Confidence 2222222117889999999999999999999999 9999999999999999999999998876543
No 413
>cd00180 PKc Catalytic domain of Protein Kinases. Protein Kinases (PKs), catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The PK family is part of a larger superfamily that includes the catalytic domains of RIO kinases, aminoglycoside phosphotransferase, choline kinase, phosphoinositide 3-kinase (PI3K), and actin-fragmin kinase. PKs make up a large family of serine/threonine kinases, protein tyrosine kinases (PTKs), and dual-specificity PKs that phosphorylate both serine/threonine and tyrosine residues of target proteins. Majority of protein phosphorylation, about 95%, occurs on serine residues while only 1% occurs on tyrosine residues. Protein phosphorylation is a mechanism by which a wide variety of cellular proteins, such as enzymes and membrane channels, are reversibly regulated in response to certain stimuli. PKs often function as components of signal transduction pathways in which
Probab=99.55 E-value=2.2e-14 Score=125.87 Aligned_cols=108 Identities=31% Similarity=0.495 Sum_probs=89.9
Q ss_pred CCCcceeEEEEEEEeecCcEEEEEEcCCCChh-HHHHHHHHHHH-----------------------------------H
Q psy6828 52 DSDFRYSAIFTPIGIYKGRIFAIKRIPKKSVD-ITRAMKKELKI-----------------------------------D 95 (392)
Q Consensus 52 lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~~~-~~~~~~~E~~~-----------------------------------~ 95 (392)
+|+|++|.||++....+++.+++|.+...... ..+.+.+|+.. +
T Consensus 1 l~~g~~~~v~~~~~~~~~~~~~~K~~~~~~~~~~~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~~~~e~~~~~~l~~ 80 (215)
T cd00180 1 LGEGGFGTVYLARDKKTGKKVAIKIIKKEDSSSLLEELLREIEILKKLNHPNIVKLYGVFEDENHLYLVMEYCEGGSLKD 80 (215)
T ss_pred CCcCCceEEEEEEecCCCcEEEEEEeccccchhHHHHHHHHHHHHHhcCCCCeeeEeeeeecCCeEEEEEecCCCCcHHH
Confidence 68999999999998888999999999866542 34567777666 3
Q ss_pred HhhcCCcCCCHHHHHHHHHHHHHHHHHHhcCCcccccCCCCCceEEcC-CceEEEeccccchhccc
Q psy6828 96 IMENEDVKLDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLVDS-RWVVKLADFGLTEFKRD 160 (392)
Q Consensus 96 ~l~~~~~~l~~~~~~~i~~qi~~~l~ylH~~~iiiHrDlKp~NIll~~-~~~~kl~DFGla~~~~~ 160 (392)
++......+++..+..++.+++.++.|||+.++ +|+||+|.||+++. ++.++|+|||.+.....
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~~-~H~dl~~~ni~~~~~~~~~~l~d~~~~~~~~~ 145 (215)
T cd00180 81 LLKENEGKLSEDEILRILLQILEGLEYLHSNGI-IHRDLKPENILLDSDNGKVKLADFGLSKLLTS 145 (215)
T ss_pred HHHhccCCCCHHHHHHHHHHHHHHHHHHHhCCe-eccCCCHhhEEEeCCCCcEEEecCCceEEccC
Confidence 333332358889999999999999999999999 99999999999999 89999999999876544
No 414
>KOG1167|consensus
Probab=99.55 E-value=5.1e-15 Score=137.78 Aligned_cols=111 Identities=26% Similarity=0.356 Sum_probs=88.7
Q ss_pred ceeeeccCCCCCcceeEEEEEEEee---cCcEEEEEEcCCCChhHHHHHHHHHHH-------------------------
Q psy6828 43 SQVSLSSNPDSDFRYSAIFTPIGIY---KGRIFAIKRIPKKSVDITRAMKKELKI------------------------- 94 (392)
Q Consensus 43 ~~~~~~~~~lg~G~~g~V~~~~~~~---~~~~vAiK~~~~~~~~~~~~~~~E~~~------------------------- 94 (392)
+.-|....++|+|+|++||++.+.. ..+.||+|.+...+ .-.++.+|+++
T Consensus 35 ~~~~~~v~kigeGsFssv~~a~~~~~~~~~~~valk~i~~ts--~p~ri~~El~~L~~~gG~~ni~~~~~~~rnnd~v~i 112 (418)
T KOG1167|consen 35 SNAYKVVNKIGEGSFSSVYKATDIEQDTKRRYVALKAIYRTS--SPSRILNELEMLYRLGGSDNIIKLNGCFRNNDQVAI 112 (418)
T ss_pred hhhhhhhccccccchhhhhhhhHhhhccccceEeeeeccccc--CchHHHHHHHHHHHhccchhhhcchhhhccCCeeEE
Confidence 4446778899999999999999887 78899999996543 23456667666
Q ss_pred --HHhhcCC-----cCCCHHHHHHHHHHHHHHHHHHhcCCcccccCCCCCceEEcCC-ceEEEeccccch
Q psy6828 95 --DIMENED-----VKLDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLVDSR-WVVKLADFGLTE 156 (392)
Q Consensus 95 --~~l~~~~-----~~l~~~~~~~i~~qi~~~l~ylH~~~iiiHrDlKp~NIll~~~-~~~kl~DFGla~ 156 (392)
.|++... ..++-.++..+++.++.||.++|.+|| ||||+||+|+|.+.. +.-.|.|||++.
T Consensus 113 vlp~~~H~~f~~l~~~l~~~~i~~Yl~~ll~Al~~~h~~GI-vHRDiKpsNFL~n~~t~rg~LvDFgLA~ 181 (418)
T KOG1167|consen 113 VLPYFEHDRFRDLYRSLSLAEIRWYLRNLLKALAHLHKNGI-VHRDIKPSNFLYNRRTQRGVLVDFGLAQ 181 (418)
T ss_pred EecccCccCHHHHHhcCCHHHHHHHHHHHHHHhhhhhccCc-cccCCCccccccccccCCceEEechhHH
Confidence 1111100 047788999999999999999999999 999999999999765 678999999998
No 415
>PRK10359 lipopolysaccharide core biosynthesis protein; Provisional
Probab=99.54 E-value=1.1e-14 Score=129.59 Aligned_cols=132 Identities=12% Similarity=0.086 Sum_probs=92.0
Q ss_pred cceeeeccCCCCCcceeEEEEEEEeecCcEEEEEEcCCCChhHH---H------HHHHHHHH-------------HH-h-
Q psy6828 42 TSQVSLSSNPDSDFRYSAIFTPIGIYKGRIFAIKRIPKKSVDIT---R------AMKKELKI-------------DI-M- 97 (392)
Q Consensus 42 ~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~~~~~---~------~~~~E~~~-------------~~-l- 97 (392)
.+..|...+.+|+|+||.||+... +++.+|||.++....... + .+.+|+.. ++ .
T Consensus 29 l~~~y~~~~~l~~~~f~~v~l~~~--~~~~~iiKvf~~~~~~~~~~~~~f~~g~~~e~Ea~~l~rL~~~GI~~~~d~~~~ 106 (232)
T PRK10359 29 LSYNIKTIKVFRNIDDTKVSLIDT--DYGKYILKVFAPKVKRTERFLKSFVKGDYYENLIVQTDRVRSEGLASLNDFYLL 106 (232)
T ss_pred hhCceEEEEEecCCCceEEEEEec--CCCcEEEEEechhcCchHHHHHhhhhhHHHHHHHHHHHHHHHCCCCcceEeeee
Confidence 467788899999999999999643 577899999975433211 1 14666553 11 0
Q ss_pred ----------------hcCC-cCCCHH--HHHHHHHHHHHHHHHHhcCCcccccCCCCCceEEcCCceEEEeccccchhc
Q psy6828 98 ----------------ENED-VKLDNM--FIASLVADILRGMLYLHDSALRYHGNLKASNCLVDSRWVVKLADFGLTEFK 158 (392)
Q Consensus 98 ----------------~~~~-~~l~~~--~~~~i~~qi~~~l~ylH~~~iiiHrDlKp~NIll~~~~~~kl~DFGla~~~ 158 (392)
+.-. ..+... .......+++.++..+|+.|+ +|||+||+||+++++| ++++|||.+...
T Consensus 107 ~~~~~~~~~~~~~lvmEyi~G~tL~~~~~~~~~~~~~i~~~l~~lH~~gi-~H~Dikp~Nili~~~g-i~liDfg~~~~~ 184 (232)
T PRK10359 107 AERKTLRYAHTYIMLIEYIEGVELNDMPEISEDVKAKIKASIESLHQHGM-VSGDPHKGNFIVSKNG-LRIIDLSGKRCT 184 (232)
T ss_pred cccccccccCCeEEEEEEECCccHHHhhhccHHHHHHHHHHHHHHHHcCC-ccCCCChHHEEEeCCC-EEEEECCCcccc
Confidence 0000 011110 002346799999999999999 9999999999999988 999999988755
Q ss_pred cccc-----------cccccccceeeeeee
Q psy6828 159 RDAE-----------YTGTDQHSFLQHTYH 177 (392)
Q Consensus 159 ~~~~-----------~~~~d~~s~g~~~~~ 177 (392)
.... ....|+|++|..+..
T Consensus 185 ~e~~a~d~~vler~y~~~~di~~lg~~~~~ 214 (232)
T PRK10359 185 AQRKAKDRIDLERHYGIKNEIKDLGYYLLI 214 (232)
T ss_pred cchhhHHHHHHHhHhcccccccceeEeehH
Confidence 3222 124599999998764
No 416
>smart00220 S_TKc Serine/Threonine protein kinases, catalytic domain. Phosphotransferases. Serine or threonine-specific kinase subfamily.
Probab=99.52 E-value=7.2e-14 Score=125.82 Aligned_cols=120 Identities=27% Similarity=0.398 Sum_probs=96.3
Q ss_pred ceeEEEEEEEeecCcEEEEEEcCCCChhH-HHHHHHHHHH-----------------------------------HHhhc
Q psy6828 56 RYSAIFTPIGIYKGRIFAIKRIPKKSVDI-TRAMKKELKI-----------------------------------DIMEN 99 (392)
Q Consensus 56 ~~g~V~~~~~~~~~~~vAiK~~~~~~~~~-~~~~~~E~~~-----------------------------------~~l~~ 99 (392)
+||.||++....+++.+|+|.+....... .+.+.+|+.. +++..
T Consensus 1 ~~g~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~l~~e~~~~~~L~~~~~~ 80 (244)
T smart00220 1 SFGKVYLARDKKTGKLVAIKVIKKEKIKKKRERILREISILKKLKHPNIVRLYDVFEDEDKLYLVMEYCDGGDLFDLLKK 80 (244)
T ss_pred CceEEEEEEECCCCcEEEEEEecccccccHHHHHHHHHHHHHhCCCCcHHHHHhheeeCCEEEEEEeCCCCCCHHHHHHh
Confidence 58999999988889999999998765433 5677777765 22222
Q ss_pred CCcCCCHHHHHHHHHHHHHHHHHHhcCCcccccCCCCCceEEcCCceEEEeccccchhccccc-----------------
Q psy6828 100 EDVKLDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLVDSRWVVKLADFGLTEFKRDAE----------------- 162 (392)
Q Consensus 100 ~~~~l~~~~~~~i~~qi~~~l~ylH~~~iiiHrDlKp~NIll~~~~~~kl~DFGla~~~~~~~----------------- 162 (392)
.. .+++..+..++.+++.++.|||+.++ +|+||+|+||++++++.++++|||.+.......
T Consensus 81 ~~-~~~~~~~~~~~~~l~~~l~~lh~~~i-~h~~i~~~ni~~~~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~pE~~ 158 (244)
T smart00220 81 RG-RLSEDEARFYARQILSALEYLHSNGI-IHRDLKPENILLDEDGHVKLADFGLARQLDPGGLLTTFVGTPEYMAPEVL 158 (244)
T ss_pred cc-CCCHHHHHHHHHHHHHHHHHHHHcCe-ecCCcCHHHeEECCCCcEEEccccceeeeccccccccccCCcCCCCHHHH
Confidence 11 27889999999999999999999999 999999999999999999999999987654321
Q ss_pred -----cccccccceeeeeee
Q psy6828 163 -----YTGTDQHSFLQHTYH 177 (392)
Q Consensus 163 -----~~~~d~~s~g~~~~~ 177 (392)
....|+|++|+++|+
T Consensus 159 ~~~~~~~~~Di~slG~~l~~ 178 (244)
T smart00220 159 LGKGYGKAVDVWSLGVILYE 178 (244)
T ss_pred ccCCCCchhhHHHHHHHHHH
Confidence 113488888888887
No 417
>cd05144 RIO2_C RIO kinase family; RIO2, C-terminal catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO2 is present in archaea and eukaryotes. It contains an N-terminal winged helix (wHTH) domain and a C-terminal RIO kinase catalytic domain. The wHTH domain is primarily seen in DNA-binding proteins, although some wHTH dom
Probab=99.49 E-value=1.2e-13 Score=121.79 Aligned_cols=113 Identities=16% Similarity=0.165 Sum_probs=80.7
Q ss_pred eeccCCCCCcceeEEEEEEEeecCcEEEEEEcCCCChh----------------------HHHHHHHHHHH---------
Q psy6828 46 SLSSNPDSDFRYSAIFTPIGIYKGRIFAIKRIPKKSVD----------------------ITRAMKKELKI--------- 94 (392)
Q Consensus 46 ~~~~~~lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~~~----------------------~~~~~~~E~~~--------- 94 (392)
+...++||+|+||.||++... +|+.||||+++..... ......+|..+
T Consensus 17 ~~~~~~i~~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i 95 (198)
T cd05144 17 ESLGNQIGVGKESDVYLALDP-DGNPVALKFHRLGRTSFRKVKRKRDYLGDRKHASWLYLSRLAAQKEFAALKALYEEGF 95 (198)
T ss_pred hhcCCccccCcceEEEEEEcC-CCCEEEEEEEecccchhhhhcchHHHHhccccchhHHHhHHHHHHHHHHHHHHHHcCC
Confidence 444678999999999999864 7999999987643210 00113334333
Q ss_pred ---------------HHhhcCCc-CCCH-HHHHHHHHHHHHHHHHHhcCCcccccCCCCCceEEcCCceEEEeccccchh
Q psy6828 95 ---------------DIMENEDV-KLDN-MFIASLVADILRGMLYLHDSALRYHGNLKASNCLVDSRWVVKLADFGLTEF 157 (392)
Q Consensus 95 ---------------~~l~~~~~-~l~~-~~~~~i~~qi~~~l~ylH~~~iiiHrDlKp~NIll~~~~~~kl~DFGla~~ 157 (392)
+++..... .+.. .....++.+++.++.++|+.++ +||||||+||+++.++.++|+|||.+..
T Consensus 96 ~v~~~~~~~~~~lv~e~~~g~~L~~~~~~~~~~~~~~~i~~~l~~lh~~gi-~H~Dl~p~Nill~~~~~~~liDfg~~~~ 174 (198)
T cd05144 96 PVPKPIDWNRHAVVMEYIDGVELYRVRVLEDPEEVLDEILEEIVKAYKHGI-IHGDLSEFNILVDDDEKIYIIDWPQMVS 174 (198)
T ss_pred CCCceeecCCceEEEEEeCCcchhhccccccHHHHHHHHHHHHHHHHHCCC-CcCCCCcccEEEcCCCcEEEEECCcccc
Confidence 11111110 1112 4456788999999999999999 9999999999999999999999999865
Q ss_pred ccc
Q psy6828 158 KRD 160 (392)
Q Consensus 158 ~~~ 160 (392)
...
T Consensus 175 ~~~ 177 (198)
T cd05144 175 TDH 177 (198)
T ss_pred CCC
Confidence 543
No 418
>PRK10345 hypothetical protein; Provisional
Probab=99.48 E-value=1.5e-13 Score=121.60 Aligned_cols=101 Identities=19% Similarity=0.279 Sum_probs=73.2
Q ss_pred cCCCCCcceeEEEEEEEeecCcEEEEEEcCCCChhHHHHHHHHHHH----------------------------------
Q psy6828 49 SNPDSDFRYSAIFTPIGIYKGRIFAIKRIPKKSVDITRAMKKELKI---------------------------------- 94 (392)
Q Consensus 49 ~~~lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~~~~~~~~~~E~~~---------------------------------- 94 (392)
...||+|+||.||. ++.++.. +||++........+.+.+|+.+
T Consensus 7 ~~~LG~G~~~~Vy~--hp~~~~k-~IKv~~~~~~~~~~~~~rEi~~l~~L~~~~~~h~nIvr~yg~~et~~g~g~v~~~I 83 (210)
T PRK10345 7 QSPLGTGRHRKCYA--HPEDAQR-CIKIVYHRGDGGDKEIRRELKYYAHLSRRLIDWSGIPRYYGTVETDCGTGYVYDVI 83 (210)
T ss_pred cceecCCCceEEEE--CCCCcCe-EEEEEeccccchHHHHHHHHHHHHHhhccCCCCcccceeeEEEEeCCCCeEEEEEE
Confidence 56799999999995 6777666 6999876544445667777766
Q ss_pred ------------HHhhcCCcCCCHHHHHHHHHHHHHHH-HHHhcCCcccccCCCCCceEEcCC----ceEEEec-cccch
Q psy6828 95 ------------DIMENEDVKLDNMFIASLVADILRGM-LYLHDSALRYHGNLKASNCLVDSR----WVVKLAD-FGLTE 156 (392)
Q Consensus 95 ------------~~l~~~~~~l~~~~~~~i~~qi~~~l-~ylH~~~iiiHrDlKp~NIll~~~----~~~kl~D-FGla~ 156 (392)
+++++. .+++. ..++.|++.++ .|||+++| +||||||+|||++.. +.++|+| ||...
T Consensus 84 ~e~~G~~~~tL~~~l~~~--~~~e~--~~~~~~~L~~l~~yLh~~~I-vhrDlKp~NILl~~~~~~~~~~~LiDg~G~~~ 158 (210)
T PRK10345 84 ADFDGKPSITLTEFAEQC--RYEED--VAQLRQLLKKLKRYLLDNRI-VTMELKPQNILCQRISESEVIPVVCDNIGEST 158 (210)
T ss_pred ecCCCCcchhHHHHHHcc--cccHh--HHHHHHHHHHHHHHHHHCCE-eecCCCHHHEEEeccCCCCCcEEEEECCCCcc
Confidence 111111 23333 35678888888 89999999 999999999999743 4799999 55443
Q ss_pred h
Q psy6828 157 F 157 (392)
Q Consensus 157 ~ 157 (392)
.
T Consensus 159 ~ 159 (210)
T PRK10345 159 F 159 (210)
T ss_pred e
Confidence 3
No 419
>KOG0576|consensus
Probab=99.47 E-value=1.1e-14 Score=142.06 Aligned_cols=135 Identities=19% Similarity=0.240 Sum_probs=104.5
Q ss_pred eeeccCCCCCcceeEEEEEEEeecCcEEEEEEcCCCChhHHHHHHHHHHH--------------HHhhc-----------
Q psy6828 45 VSLSSNPDSDFRYSAIFTPIGIYKGRIFAIKRIPKKSVDITRAMKKELKI--------------DIMEN----------- 99 (392)
Q Consensus 45 ~~~~~~~lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~~~~~~~~~~E~~~--------------~~l~~----------- 99 (392)
-|...-.+|.|+||.||+++++.+++..|+|.++-..-....-+++|+.+ .|+++
T Consensus 16 dyellqrvgsgTygdvyKaRd~~s~elaavkvVkLep~dd~~~iqqei~~~~dc~h~nivay~gsylr~dklwicMEycg 95 (829)
T KOG0576|consen 16 DYELLQRVGSGTYGDVYKARDKRSGELAAVKVVKLEPGDDFSGIQQEIGMLRDCRHPNIVAYFGSYLRRDKLWICMEYCG 95 (829)
T ss_pred chhheeeecCCcccchhhhcccccCchhhheeeeccCCccccccccceeeeecCCCcChHHHHhhhhhhcCcEEEEEecC
Confidence 34455579999999999999999999999999975544444445555544 23322
Q ss_pred -CC--------cCCCHHHHHHHHHHHHHHHHHHhcCCcccccCCCCCceEEcCCceEEEeccccchhcccccc-------
Q psy6828 100 -ED--------VKLDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLVDSRWVVKLADFGLTEFKRDAEY------- 163 (392)
Q Consensus 100 -~~--------~~l~~~~~~~i~~qi~~~l~ylH~~~iiiHrDlKp~NIll~~~~~~kl~DFGla~~~~~~~~------- 163 (392)
++ +.+++.++....++.+.||.|||+.+- +|||||-.|||+++.|.+|++|||.+..++....
T Consensus 96 ggslQdiy~~TgplselqiayvcRetl~gl~ylhs~gk-~hRdiKGanilltd~gDvklaDfgvsaqitati~KrksfiG 174 (829)
T KOG0576|consen 96 GGSLQDIYHVTGPLSELQIAYVCRETLQGLKYLHSQGK-IHRDIKGANILLTDEGDVKLADFGVSAQITATIAKRKSFIG 174 (829)
T ss_pred CCcccceeeecccchhHHHHHHHhhhhccchhhhcCCc-ccccccccceeecccCceeecccCchhhhhhhhhhhhcccC
Confidence 11 169999999999999999999999999 9999999999999999999999999875432111
Q ss_pred -------------------ccccccceeeeeeeccC
Q psy6828 164 -------------------TGTDQHSFLQHTYHVNR 180 (392)
Q Consensus 164 -------------------~~~d~~s~g~~~~~~~~ 180 (392)
...|+|+.|.+..|..+
T Consensus 175 tpywmapEvaaverkggynqlcdiwa~gitAiel~e 210 (829)
T KOG0576|consen 175 TPYWMAPEVAAVERKGGYNQLCDIWALGITAIELGE 210 (829)
T ss_pred CccccchhHHHHHhcccccccccccccccchhhhhh
Confidence 12389999988777433
No 420
>PLN00113 leucine-rich repeat receptor-like protein kinase; Provisional
Probab=99.47 E-value=6.7e-14 Score=151.93 Aligned_cols=128 Identities=18% Similarity=0.193 Sum_probs=90.1
Q ss_pred ccCCCCCcceeEEEEEEEeecCcEEEEEEcCCCChhHHHHH--HHHHHH--------------------HHhhcCCc---
Q psy6828 48 SSNPDSDFRYSAIFTPIGIYKGRIFAIKRIPKKSVDITRAM--KKELKI--------------------DIMENEDV--- 102 (392)
Q Consensus 48 ~~~~lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~~~~~~~~--~~E~~~--------------------~~l~~~~~--- 102 (392)
..+.+|+|+||.||+|.+..+++.||||.+........+.+ .+.+.. +|+.++..
T Consensus 694 ~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~l~~l~HpnIv~~~~~~~~~~~~~lv~Ey~~~g~L~~~ 773 (968)
T PLN00113 694 EENVISRGKKGASYKGKSIKNGMQFVVKEINDVNSIPSSEIADMGKLQHPNIVKLIGLCRSEKGAYLIHEYIEGKNLSEV 773 (968)
T ss_pred cccEEccCCCeeEEEEEECCCCcEEEEEEccCCccccHHHHHHHhhCCCCCcceEEEEEEcCCCCEEEEeCCCCCcHHHH
Confidence 35679999999999999989999999999975432111111 111111 34433322
Q ss_pred --CCCHHHHHHHHHHHHHHHHHHh---cCCcccccCCCCCceEEcCCceEEEeccccchhccc-----------------
Q psy6828 103 --KLDNMFIASLVADILRGMLYLH---DSALRYHGNLKASNCLVDSRWVVKLADFGLTEFKRD----------------- 160 (392)
Q Consensus 103 --~l~~~~~~~i~~qi~~~l~ylH---~~~iiiHrDlKp~NIll~~~~~~kl~DFGla~~~~~----------------- 160 (392)
.+++.+...++.|++.||.||| +.++ +||||||+||+++.++..++. ||.......
T Consensus 774 l~~l~~~~~~~i~~~ia~~L~yLH~~~~~~i-iH~dlkp~Nil~~~~~~~~~~-~~~~~~~~~~~~~~~t~~y~aPE~~~ 851 (968)
T PLN00113 774 LRNLSWERRRKIAIGIAKALRFLHCRCSPAV-VVGNLSPEKIIIDGKDEPHLR-LSLPGLLCTDTKCFISSAYVAPETRE 851 (968)
T ss_pred HhcCCHHHHHHHHHHHHHHHHHhccCCCCCe-ecCCCCHHhEEECCCCceEEE-eccccccccCCCccccccccCccccc
Confidence 3789999999999999999999 5678 999999999999988877665 544332111
Q ss_pred --cccccccccceeeeeee
Q psy6828 161 --AEYTGTDQHSFLQHTYH 177 (392)
Q Consensus 161 --~~~~~~d~~s~g~~~~~ 177 (392)
......|+||||+++||
T Consensus 852 ~~~~~~~sDv~S~Gvvl~e 870 (968)
T PLN00113 852 TKDITEKSDIYGFGLILIE 870 (968)
T ss_pred CCCCCcccchhhHHHHHHH
Confidence 11223588888888887
No 421
>KOG1164|consensus
Probab=99.46 E-value=1.8e-13 Score=130.05 Aligned_cols=112 Identities=19% Similarity=0.214 Sum_probs=85.9
Q ss_pred eeeccCCCCCcceeEEEEEEEeecC-cEEEEEEcCCCChh------HHHHHHHHHHH-----------------------
Q psy6828 45 VSLSSNPDSDFRYSAIFTPIGIYKG-RIFAIKRIPKKSVD------ITRAMKKELKI----------------------- 94 (392)
Q Consensus 45 ~~~~~~~lg~G~~g~V~~~~~~~~~-~~vAiK~~~~~~~~------~~~~~~~E~~~----------------------- 94 (392)
.|...+.||+|+||.||.+.+..++ +.+|+|........ ....+...+..
T Consensus 19 ~~~i~~~iG~G~fG~V~~v~~~~~~~~~~a~K~e~~~~~~~~~~l~~E~~vl~~l~~~~~~~~~~~~~~~G~~~~~~~~i 98 (322)
T KOG1164|consen 19 RYKLGKKIGEGGFGAVYLVSDKSEKNKEYAKKLEKKELGSKPSVLKIEIQVLKKLEKKNGPSHFPKLLDHGRSTEDFNFI 98 (322)
T ss_pred ceEEeeeccccCCceEEEEEecCCCCeeEEEEEEEecccCCCccchhHHHHHHHHhhhcCCCCCCEEEEeccCCCceeEE
Confidence 5777889999999999999987774 68899987653211 11122222220
Q ss_pred ----------HHhh-cCCcCCCHHHHHHHHHHHHHHHHHHhcCCcccccCCCCCceEEcCC-----ceEEEeccccchh
Q psy6828 95 ----------DIME-NEDVKLDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLVDSR-----WVVKLADFGLTEF 157 (392)
Q Consensus 95 ----------~~l~-~~~~~l~~~~~~~i~~qi~~~l~ylH~~~iiiHrDlKp~NIll~~~-----~~~kl~DFGla~~ 157 (392)
++.. .....++...+..++.|++.+|+++|+.|+ +||||||+|+++... ..+.+.|||+++.
T Consensus 99 VM~l~G~sL~dl~~~~~~~~fs~~T~l~ia~q~l~~l~~lH~~G~-iHRDiKp~N~~~g~~~~~~~~~~~llDfGlar~ 176 (322)
T KOG1164|consen 99 VMSLLGPSLEDLRKRNPPGRFSRKTVLRIAIQNLNALEDLHSKGF-IHRDIKPENFVVGQSSRSEVRTLYLLDFGLARR 176 (322)
T ss_pred EEeccCccHHHHHHhCCCCCcCHhHHHHHHHHHHHHHHHHHhcCc-ccCCcCHHHeeecCCCCcccceEEEEecCCCcc
Confidence 3332 223579999999999999999999999999 999999999999765 4699999999983
No 422
>cd05119 RIO RIO kinase family, catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases present in archaea, bacteria and eukaryotes. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. RIO kinases contain a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. Most organisms contain at least two RIO kinases, RIO1 and RIO2. A third protein, RIO3, is present in multicellular eukaryotes. In yeast, RIO1 and RIO2 are essential for survival. They funct
Probab=99.44 E-value=2.8e-13 Score=118.23 Aligned_cols=108 Identities=20% Similarity=0.195 Sum_probs=77.5
Q ss_pred CCCCCcceeEEEEEEEeecCcEEEEEEcCCCChh--HHHHH----------------------HHHHHH-----------
Q psy6828 50 NPDSDFRYSAIFTPIGIYKGRIFAIKRIPKKSVD--ITRAM----------------------KKELKI----------- 94 (392)
Q Consensus 50 ~~lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~~~--~~~~~----------------------~~E~~~----------- 94 (392)
+.||+|+||.||++.+. +++.||||+++..... ..... ..|...
T Consensus 3 ~~lg~G~~g~Vy~a~~~-~~~~vavKv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~~~ 81 (187)
T cd05119 3 GPIGTGKEADVYLALDG-DGEPVAVKIYRTGRTSFKKRKRYRTGDYRFGRKKSNWRYLSRLWAEKEFRNLKRLYEAGVPV 81 (187)
T ss_pred cccccccceeEEEEECC-CCCEEEEEEEecCccchhhhhhhhHHHHHhccCCcchhhhhhHHHHHHHHHHHHHHHcCCCC
Confidence 57999999999999876 8999999998653221 10100 122211
Q ss_pred -------------HHhhcCC---cCC---CH-HHHHHHHHHHHHHHHHHhc-CCcccccCCCCCceEEcCCceEEEeccc
Q psy6828 95 -------------DIMENED---VKL---DN-MFIASLVADILRGMLYLHD-SALRYHGNLKASNCLVDSRWVVKLADFG 153 (392)
Q Consensus 95 -------------~~l~~~~---~~l---~~-~~~~~i~~qi~~~l~ylH~-~~iiiHrDlKp~NIll~~~~~~kl~DFG 153 (392)
+++.... ..+ .. .++..++.+++.++.++|+ .++ +||||||+||+++ ++.++++|||
T Consensus 82 ~~~~~~~~~~lv~e~~~g~~~~~~~l~~~~~~~~~~~~~~~~~~~l~~lh~~~~i-vH~Dl~p~Nili~-~~~~~liDfg 159 (187)
T cd05119 82 PKPIDLNRHVLVMEFIGGDGIPAPRLKDVRLLEDPEELYDQILELMRKLYREAGL-VHGDLSEYNILVD-DGKVYIIDVP 159 (187)
T ss_pred CceEecCCCEEEEEEeCCCCccChhhhhhhhcccHHHHHHHHHHHHHHHhhccCc-CcCCCChhhEEEE-CCcEEEEECc
Confidence 1111100 011 11 5678899999999999999 999 9999999999999 8999999999
Q ss_pred cchhccc
Q psy6828 154 LTEFKRD 160 (392)
Q Consensus 154 la~~~~~ 160 (392)
.+.....
T Consensus 160 ~a~~~~~ 166 (187)
T cd05119 160 QAVEIDH 166 (187)
T ss_pred ccccccC
Confidence 9975544
No 423
>PRK12274 serine/threonine protein kinase; Provisional
Probab=99.42 E-value=7.2e-13 Score=115.72 Aligned_cols=107 Identities=17% Similarity=0.143 Sum_probs=78.8
Q ss_pred cCCCCCcceeEEEEEEEeecCcEEEEEEcCCCChh----HHHHHHHHHHH-----------------------HHhhcCC
Q psy6828 49 SNPDSDFRYSAIFTPIGIYKGRIFAIKRIPKKSVD----ITRAMKKELKI-----------------------DIMENED 101 (392)
Q Consensus 49 ~~~lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~~~----~~~~~~~E~~~-----------------------~~l~~~~ 101 (392)
...|++|+||+||++.. .+.+++.+.+...... ....+.+|+.+ +++....
T Consensus 7 ~~~l~~~~f~~v~~~~~--~~~k~~~~~l~~~~~~~~~~~~~l~~rE~~iL~~L~~~~~vP~ll~~~~~~lvmeyI~G~~ 84 (218)
T PRK12274 7 NEPLKSDTFGRILLVRG--GERKFVRRDLSAAPWWLRGVAWWLARREALALRQLDGLPRTPRLLHWDGRHLDRSYLAGAA 84 (218)
T ss_pred ceeecCCCcceEEEeec--CCceeeecccccchhhhhhHHHHHHHHHHHHHHhcCCCCCCCEEEEEcCEEEEEeeecCcc
Confidence 44689999999997754 6888888877654331 12257788887 2222211
Q ss_pred c--CCCHHHHHHHHHHHHHHHHHHhcCCcccccCC-CCCceEEcCCceEEEeccccchhcc
Q psy6828 102 V--KLDNMFIASLVADILRGMLYLHDSALRYHGNL-KASNCLVDSRWVVKLADFGLTEFKR 159 (392)
Q Consensus 102 ~--~l~~~~~~~i~~qi~~~l~ylH~~~iiiHrDl-Kp~NIll~~~~~~kl~DFGla~~~~ 159 (392)
+ ..+. ....++.|++.+|.++|++|+ +|||| ||+|||++.++.++|+|||++....
T Consensus 85 L~~~~~~-~~~~~~~qi~~~L~~lH~~GI-vHrDL~kp~NILv~~~g~i~LIDFG~A~~~~ 143 (218)
T PRK12274 85 MYQRPPR-GDLAYFRAARRLLQQLHRCGV-AHNDLAKEANWLVQEDGSPAVIDFQLAVRGN 143 (218)
T ss_pred HHhhhhh-hhHHHHHHHHHHHHHHHHCcC-ccCCCCCcceEEEcCCCCEEEEECCCceecC
Confidence 1 0111 234678999999999999999 99999 7999999999999999999997543
No 424
>PRK14879 serine/threonine protein kinase; Provisional
Probab=99.40 E-value=1.3e-12 Score=116.32 Aligned_cols=104 Identities=25% Similarity=0.228 Sum_probs=76.4
Q ss_pred CCCCCcceeEEEEEEEeecCcEEEEEEcCCCChh--------HHHHHHHHHHH--------------------------H
Q psy6828 50 NPDSDFRYSAIFTPIGIYKGRIFAIKRIPKKSVD--------ITRAMKKELKI--------------------------D 95 (392)
Q Consensus 50 ~~lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~~~--------~~~~~~~E~~~--------------------------~ 95 (392)
+.||+|++|.||+|.. +|..+++|........ ....+.+|..+ +
T Consensus 2 ~~l~~G~~~~vy~~~~--~~~~~~vK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~p~~~~~~~~~~~lv~e 79 (211)
T PRK14879 2 KLIKRGAEAEIYLGDF--LGIKAVIKWRIPKRYRHPELDERIRRERTRREARIMSRARKAGVNVPAVYFVDPENFIIVME 79 (211)
T ss_pred cccccCceEEEEEEee--CCCceEEEEeCCcCCcChHHHHHHHHHHHHHHHHHHHHHHHCCCCCCeEEEEeCCCCEEEEE
Confidence 4689999999999975 7889999986543211 12345556555 1
Q ss_pred HhhcCCc-----CCCHHHHHHHHHHHHHHHHHHhcCCcccccCCCCCceEEcCCceEEEeccccchhc
Q psy6828 96 IMENEDV-----KLDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLVDSRWVVKLADFGLTEFK 158 (392)
Q Consensus 96 ~l~~~~~-----~l~~~~~~~i~~qi~~~l~ylH~~~iiiHrDlKp~NIll~~~~~~kl~DFGla~~~ 158 (392)
++..... .... +...++.+++.+|.++|+.++ +|+|++|+|||++ ++.++++|||+++..
T Consensus 80 ~~~G~~L~~~~~~~~~-~~~~i~~~i~~~l~~lH~~~i-~H~Dl~p~Nil~~-~~~~~liDf~~a~~~ 144 (211)
T PRK14879 80 YIEGEPLKDLINSNGM-EELELSREIGRLVGKLHSAGI-IHGDLTTSNMILS-GGKIYLIDFGLAEFS 144 (211)
T ss_pred EeCCcCHHHHHHhccH-HHHHHHHHHHHHHHHHHhCCc-ccCCCCcccEEEE-CCCEEEEECCcccCC
Confidence 1111110 0111 456889999999999999999 9999999999999 788999999998764
No 425
>KOG1290|consensus
Probab=99.39 E-value=1.7e-12 Score=123.06 Aligned_cols=100 Identities=20% Similarity=0.260 Sum_probs=82.3
Q ss_pred ceeeeccCCCCCcceeEEEEEEEeecCcEEEEEEcCCCChhHHHHHHHHHHH----------------------------
Q psy6828 43 SQVSLSSNPDSDFRYSAIFTPIGIYKGRIFAIKRIPKKSVDITRAMKKELKI---------------------------- 94 (392)
Q Consensus 43 ~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~~~~~~~~~~E~~~---------------------------- 94 (392)
..+|...+.||=|-|++||+|.+..+.+.||+|+.+.. ..-++....|+.+
T Consensus 77 ~gRY~v~rKLGWGHFSTVWLawDtq~~r~VAlKVvKSA-qhYtEaAlDEIklL~~v~~~Dp~~~~~~~VV~LlD~FkhsG 155 (590)
T KOG1290|consen 77 GGRYHVQRKLGWGHFSTVWLAWDTQNKRYVALKVVKSA-QHYTEAALDEIKLLQQVREGDPNDPGKKCVVQLLDHFKHSG 155 (590)
T ss_pred CceEEEEEeccccccceeEEEeeccCCeEEEEEEEehh-hHHHHHHHHHHHHHHHHHhcCCCCCCCceeeeeeccceecC
Confidence 48999999999999999999999999999999998543 3456677788877
Q ss_pred ------------------HHhh-cCCcCCCHHHHHHHHHHHHHHHHHHhc-CCcccccCCCCCceEEcCC
Q psy6828 95 ------------------DIME-NEDVKLDNMFIASLVADILRGMLYLHD-SALRYHGNLKASNCLVDSR 144 (392)
Q Consensus 95 ------------------~~l~-~~~~~l~~~~~~~i~~qi~~~l~ylH~-~~iiiHrDlKp~NIll~~~ 144 (392)
.+++ .....++-..++.|++|++.||.|||. ++| ||-||||+|||+..+
T Consensus 156 pNG~HVCMVfEvLGdnLLklI~~s~YrGlpl~~VK~I~~qvL~GLdYLH~ecgI-IHTDlKPENvLl~~~ 224 (590)
T KOG1290|consen 156 PNGQHVCMVFEVLGDNLLKLIKYSNYRGLPLSCVKEICRQVLTGLDYLHRECGI-IHTDLKPENVLLCST 224 (590)
T ss_pred CCCcEEEEEehhhhhHHHHHHHHhCCCCCcHHHHHHHHHHHHHHHHHHHHhcCc-cccCCCcceeeeecc
Confidence 1111 122248889999999999999999996 677 999999999999554
No 426
>TIGR03724 arch_bud32 Kae1-associated kinase Bud32. Members of this protein family are the Bud32 protein associated with Kae1 (kinase-associated endopeptidase 1) in the Archaea. In many Archaeal genomes, Kae1 and Bud32 are fused. The complex is homologous to the Kae1 and Bud32 subunits of the eukaryotic KEOPS complex, an apparently ancient protein kinase-containing molecular machine.
Probab=99.38 E-value=9.4e-13 Score=116.08 Aligned_cols=104 Identities=23% Similarity=0.257 Sum_probs=75.2
Q ss_pred CCCcceeEEEEEEEeecCcEEEEEEcCCCCh--------hHHHHHHHHHHH-HHhhcC----------------------
Q psy6828 52 DSDFRYSAIFTPIGIYKGRIFAIKRIPKKSV--------DITRAMKKELKI-DIMENE---------------------- 100 (392)
Q Consensus 52 lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~~--------~~~~~~~~E~~~-~~l~~~---------------------- 100 (392)
||+|+||.||++. .++..+++|....... ...+++.+|..+ ..+...
T Consensus 2 ig~G~~~~vy~~~--~~~~~~viK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~p~~~~~~~~~~~lv~e~~ 79 (199)
T TIGR03724 2 IAKGAEAIIYLGD--FLGLKAVIKERVPKSYRHPELDERIRRERTRNEARLLSRARKAGVNTPVVYDVDPDNKTIVMEYI 79 (199)
T ss_pred CCCCceEEEEEee--cCCccEEEEEecCCcCcCchHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCEEEEEEE
Confidence 7999999999997 5688999998654321 112455666665 111100
Q ss_pred -CcCCCHHHHH---HHHHHHHHHHHHHhcCCcccccCCCCCceEEcCCceEEEeccccchhcc
Q psy6828 101 -DVKLDNMFIA---SLVADILRGMLYLHDSALRYHGNLKASNCLVDSRWVVKLADFGLTEFKR 159 (392)
Q Consensus 101 -~~~l~~~~~~---~i~~qi~~~l~ylH~~~iiiHrDlKp~NIll~~~~~~kl~DFGla~~~~ 159 (392)
+..+.+.... .++.|++.+|.++|+.++ +|+|+||.||+++ ++.++++|||+++...
T Consensus 80 ~g~~l~~~~~~~~~~~~~~i~~~l~~lH~~gi-~H~Dl~~~Nil~~-~~~~~liDfg~a~~~~ 140 (199)
T TIGR03724 80 EGKPLKDVIEEGNDELLREIGRLVGKLHKAGI-VHGDLTTSNIIVR-DDKLYLIDFGLGKYSD 140 (199)
T ss_pred CCccHHHHHhhcHHHHHHHHHHHHHHHHHCCe-ecCCCCcceEEEE-CCcEEEEECCCCcCCC
Confidence 0112211111 789999999999999999 9999999999999 8899999999987643
No 427
>PRK09605 bifunctional UGMP family protein/serine/threonine protein kinase; Validated
Probab=99.37 E-value=1.2e-12 Score=132.71 Aligned_cols=120 Identities=21% Similarity=0.265 Sum_probs=83.2
Q ss_pred eccccccccceeeeccCCCCCcceeEEEEEEEeecCcEEEEEEcCCCCh--------hHHHHHHHHHHH-----------
Q psy6828 34 CSWFQNVHTSQVSLSSNPDSDFRYSAIFTPIGIYKGRIFAIKRIPKKSV--------DITRAMKKELKI----------- 94 (392)
Q Consensus 34 ~~~~~~~~~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~~--------~~~~~~~~E~~~----------- 94 (392)
..|.........+...+.||+|+||.||++... +..+++|+...... ...+++.+|..+
T Consensus 323 ~~~~~~~~~~~~~~~~~~iG~G~~g~Vy~~~~~--~~~~v~k~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~ 400 (535)
T PRK09605 323 VTWIKEEEVKRRKIPDHLIGKGAEADIKKGEYL--GRDAVIKERVPKGYRHPELDERLRTERTRAEARLLSEARRAGVPT 400 (535)
T ss_pred eeeccccccccccCccceeccCCcEEEEEEeec--CccceeEEEecccccchhHHHHHHHHHHHHHHHHHHhhcccCCCe
Confidence 345555555555667889999999999998743 44445444322111 123456777766
Q ss_pred ---------------HHhhcCCcCCCHH--HHHHHHHHHHHHHHHHhcCCcccccCCCCCceEEcCCceEEEeccccchh
Q psy6828 95 ---------------DIMENEDVKLDNM--FIASLVADILRGMLYLHDSALRYHGNLKASNCLVDSRWVVKLADFGLTEF 157 (392)
Q Consensus 95 ---------------~~l~~~~~~l~~~--~~~~i~~qi~~~l~ylH~~~iiiHrDlKp~NIll~~~~~~kl~DFGla~~ 157 (392)
+++... .+.+. ....++.|++.+|.|||+.++ +||||||+|||+ .++.++|+|||+++.
T Consensus 401 p~~~~~~~~~~~lv~E~~~g~--~L~~~l~~~~~~~~~i~~~L~~lH~~gi-iHrDlkp~NILl-~~~~~~liDFGla~~ 476 (535)
T PRK09605 401 PVIYDVDPEEKTIVMEYIGGK--DLKDVLEGNPELVRKVGEIVAKLHKAGI-VHGDLTTSNFIV-RDDRLYLIDFGLGKY 476 (535)
T ss_pred eEEEEEeCCCCEEEEEecCCC--cHHHHHHHHHHHHHHHHHHHHHHHhCCC-ccCCCChHHEEE-ECCcEEEEeCccccc
Confidence 111111 12221 256788999999999999999 999999999999 678899999999987
Q ss_pred cc
Q psy6828 158 KR 159 (392)
Q Consensus 158 ~~ 159 (392)
..
T Consensus 477 ~~ 478 (535)
T PRK09605 477 SD 478 (535)
T ss_pred CC
Confidence 54
No 428
>KOG1024|consensus
Probab=99.34 E-value=5.3e-13 Score=123.29 Aligned_cols=197 Identities=16% Similarity=0.181 Sum_probs=130.1
Q ss_pred eeeeccCCCCCcceeEEEEEEEee-----cCcEEEEEEcCCC-ChhHHHHHHHHHHH-----------------------
Q psy6828 44 QVSLSSNPDSDFRYSAIFTPIGIY-----KGRIFAIKRIPKK-SVDITRAMKKELKI----------------------- 94 (392)
Q Consensus 44 ~~~~~~~~lg~G~~g~V~~~~~~~-----~~~~vAiK~~~~~-~~~~~~~~~~E~~~----------------------- 94 (392)
.+......+-+|+||.||.|.... +.+.|-+|.++.. +.-+...+..|...
T Consensus 284 ~Rv~l~~llqEGtFGri~~gI~~eEdt~n~~q~v~vKTvk~~AS~iQv~~~L~es~lly~~sH~nll~V~~V~ie~~~~P 363 (563)
T KOG1024|consen 284 CRVRLSCLLQEGTFGRIYRGIWREEDTYNDCQEVLVKTVKQHASQIQVNLLLQESMLLYGASHPNLLSVLGVSIEDYATP 363 (563)
T ss_pred hheechhhhhcCchhheeeeeecccCCcchHHHHHHHHHHhcccHHHHHHHHHHHHHHhcCcCCCccceeEEEeeccCcc
Confidence 334556678899999999996543 2345667776543 22344556666555
Q ss_pred -------------HHhhc-------CCcCCCHHHHHHHHHHHHHHHHHHhcCCcccccCCCCCceEEcCCceEEEecccc
Q psy6828 95 -------------DIMEN-------EDVKLDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLVDSRWVVKLADFGL 154 (392)
Q Consensus 95 -------------~~l~~-------~~~~l~~~~~~~i~~qi~~~l~ylH~~~iiiHrDlKp~NIll~~~~~~kl~DFGl 154 (392)
.|+.. ....++..+...++.|++.|+.|||+.++ ||.||...|++|++.-++||+|=.+
T Consensus 364 ~V~y~~~~~gNLK~FL~~Cr~~~~~~aqtvtt~qlV~masQla~am~hlh~~~V-iHkDiAaRNCvIdd~LqVkltDsaL 442 (563)
T KOG1024|consen 364 FVLYPATGVGNLKSFLQICRGDDPSYAQTVTTIQLVLMASQLAMAMEHLHNHGV-IHKDIAARNCVIDDQLQVKLTDSAL 442 (563)
T ss_pred eEEEeccCcchHHHHHHHhccCCCccccchhHHHHHHHHHHHHHHHHHHHhcCc-ccchhhhhcceehhheeEEeccchh
Confidence 34431 11247888899999999999999999999 9999999999999999999999999
Q ss_pred chhcccccc-------------------------ccccccceeeeeee---ccCCCCcccccccccchhhhccCCHHHHH
Q psy6828 155 TEFKRDAEY-------------------------TGTDQHSFLQHTYH---VNRAGSTESLHCKCDEALLFEMLPRSVAE 206 (392)
Q Consensus 155 a~~~~~~~~-------------------------~~~d~~s~g~~~~~---~~~~~~~~~~d~~~~~~lL~~~lp~~v~~ 206 (392)
++-+....+ ...|+||||+++|| ..+.++.+ +-|.++..
T Consensus 443 SRDLFP~DYhcLGDnEnRPvkWMslEal~n~~yssasDvWsfGVllWELmtlg~~Pyae-------------IDPfEm~~ 509 (563)
T KOG1024|consen 443 SRDLFPGDYHCLGDNENRPVKWMSLEALQNSHYSSASDVWSFGVLLWELMTLGKLPYAE-------------IDPFEMEH 509 (563)
T ss_pred ccccCcccccccCCCCCCcccccCHHHHhhhhhcchhhhHHHHHHHHHHHhcCCCCccc-------------cCHHHHHH
Confidence 986543221 12399999999999 33444443 44666666
Q ss_pred HhhcCCCccccccC---ceEEEeecccchhhh-hccCChhhHHHhHHHHHHHHHH
Q psy6828 207 QLRRGTSVEAESFD---SVTIYFSDIVGFTAM-SAESTPLQVVDFLNDLYTCFDS 257 (392)
Q Consensus 207 ~l~~~~~~~~~~~~---~vtvlf~DI~~ft~l-~~~~~p~~l~~~Ln~~~~~~~~ 257 (392)
.++++-.+..+.-. -.++|.+- +.-+ .++.+-+++..-|.+|+..+.+
T Consensus 510 ylkdGyRlaQP~NCPDeLf~vMacC---WallpeeRPsf~Qlv~cLseF~~qlt~ 561 (563)
T KOG1024|consen 510 YLKDGYRLAQPFNCPDELFTVMACC---WALLPEERPSFSQLVICLSEFHTQLTR 561 (563)
T ss_pred HHhccceecCCCCCcHHHHHHHHHH---HhcCcccCCCHHHHHHHHHHHHHHHhh
Confidence 66665433222100 01121111 1111 2445667788888888876654
No 429
>PLN00181 protein SPA1-RELATED; Provisional
Probab=99.28 E-value=4.9e-12 Score=134.34 Aligned_cols=61 Identities=16% Similarity=0.180 Sum_probs=50.8
Q ss_pred HhhcCCcCCCHHHHHHHHHHHHHHHHHHhcCCcccccCCCCCceEEcC-------------------CceEEEeccccch
Q psy6828 96 IMENEDVKLDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLVDS-------------------RWVVKLADFGLTE 156 (392)
Q Consensus 96 ~l~~~~~~l~~~~~~~i~~qi~~~l~ylH~~~iiiHrDlKp~NIll~~-------------------~~~~kl~DFGla~ 156 (392)
++......+++.++..+++||+.||.|||+++| +||||||+|||++. ++.+|++|||+++
T Consensus 69 ~l~~~~~~~~~~~~~~i~~qi~~al~~lH~~gI-vHrDlKP~NiLl~~~~~~k~~d~~~~~~~~~~~~~~~ki~DfG~a~ 147 (793)
T PLN00181 69 WLDNPDRSVDAFECFHVFRQIVEIVNAAHSQGI-VVHNVRPSCFVMSSFNHVSFIESASCSDSGSDEDATTKSREIGSSR 147 (793)
T ss_pred HHhcccccccHHHHHHHHHHHHHHHHHHHhCCe-eeccCCchhEEEcccCcEEEeeccccCcccccccCccccccccccc
Confidence 343434469999999999999999999999999 99999999999954 4567788888775
Q ss_pred h
Q psy6828 157 F 157 (392)
Q Consensus 157 ~ 157 (392)
.
T Consensus 148 ~ 148 (793)
T PLN00181 148 R 148 (793)
T ss_pred c
Confidence 3
No 430
>PF14531 Kinase-like: Kinase-like; PDB: 3DZO_A 2W1Z_A 3BYV_A 3Q5Z_A 3Q60_A.
Probab=99.25 E-value=1.1e-11 Score=113.63 Aligned_cols=110 Identities=23% Similarity=0.230 Sum_probs=76.6
Q ss_pred eccCCCCCcceeEEEEEEEeecCcEEEEEEcCCCCh---hHHHHHHHHHHH-----------------------------
Q psy6828 47 LSSNPDSDFRYSAIFTPIGIYKGRIFAIKRIPKKSV---DITRAMKKELKI----------------------------- 94 (392)
Q Consensus 47 ~~~~~lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~~---~~~~~~~~E~~~----------------------------- 94 (392)
...+.||.|+++.||.+++..||+.+|+|+...... ...+.+.+|...
T Consensus 15 ~~~~~i~~g~~~~v~~v~d~~t~~~~avkvf~~~~~~~~~~~~~~~~e~l~~~~~~~~~~p~~a~~~~r~l~P~d~~~i~ 94 (288)
T PF14531_consen 15 VRGRIIGKGGFSIVFEVTDVETGEEFAVKVFLLPADASANEYEQLKEEQLAITLFPGVKNPKEAYRHLRFLVPLDLLRIP 94 (288)
T ss_dssp EEEEEEEEETTEEEEEEEETTTTEEEEEEEEEESSTTHTTHHHHHHHHHHGGGGSTT--SHHHHHHHH-B---SEEEEET
T ss_pred EEccccccCCceEEEEEEEccCCceEEEEEEecccccchHHHHHHHHHHHHhhhhccCCCHHHHHHhceEEeeeEEEEEc
Confidence 447789999999999999999999999998853322 345555555533
Q ss_pred -----------------------------------HHhhcCCcC---CCHHHHHHHHHHHHHHHHHHhcCCcccccCCCC
Q psy6828 95 -----------------------------------DIMENEDVK---LDNMFIASLVADILRGMLYLHDSALRYHGNLKA 136 (392)
Q Consensus 95 -----------------------------------~~l~~~~~~---l~~~~~~~i~~qi~~~l~ylH~~~iiiHrDlKp 136 (392)
+.+...... +....-..+..|++..+.+||+.|+ +|+||||
T Consensus 95 ~~~~~~~~~~~~~~~~v~n~~~l~P~~~~dL~~~~~~l~~~~~~~~~l~~~arl~lT~Q~I~lvA~Lh~~Gl-VHgdi~~ 173 (288)
T PF14531_consen 95 GKPPFFERGPGQSIYWVLNRFLLMPRAQGDLQDLVEALFSRAQTHSPLAFAARLSLTVQMIRLVANLHSYGL-VHGDIKP 173 (288)
T ss_dssp TS-SEEEECETTEEEEEESEEEEEE--SEEHHHHHHHHHHHTTTSHHHHHHHHHHHHHHHHHHHHHHHHTTE-EEST-SG
T ss_pred CCCcceecCCCCccceeehhhhccchhhhcHHHHHHHHhhcccccchhHHHHHHHHHHHHHHHHHHHhhcce-Eecccce
Confidence 111111101 1112224556899999999999999 9999999
Q ss_pred CceEEcCCceEEEeccccchh
Q psy6828 137 SNCLVDSRWVVKLADFGLTEF 157 (392)
Q Consensus 137 ~NIll~~~~~~kl~DFGla~~ 157 (392)
+|++++.+|.++|+||+....
T Consensus 174 ~nfll~~~G~v~Lg~F~~~~r 194 (288)
T PF14531_consen 174 ENFLLDQDGGVFLGDFSSLVR 194 (288)
T ss_dssp GGEEE-TTS-EEE--GGGEEE
T ss_pred eeEEEcCCCCEEEcChHHHee
Confidence 999999999999999987653
No 431
>KOG1166|consensus
Probab=99.24 E-value=3.1e-11 Score=125.83 Aligned_cols=161 Identities=18% Similarity=0.197 Sum_probs=107.7
Q ss_pred ceeeeccCCCCCcceeEEEEEEEeecCcEEEEEEcCCCCh-------hHHHHHHHHHHH---------------------
Q psy6828 43 SQVSLSSNPDSDFRYSAIFTPIGIYKGRIFAIKRIPKKSV-------DITRAMKKELKI--------------------- 94 (392)
Q Consensus 43 ~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~~-------~~~~~~~~E~~~--------------------- 94 (392)
...+-....+|+|+||+||+|.+.. |+.||+|+=+.... +..+++.-++..
T Consensus 697 ~~~~~I~~e~G~g~y~~vy~a~~~~-~~~~alK~e~P~~~WEfYI~~q~~~RLk~~~~~~~~~~~~a~~~~~~S~lv~ey 775 (974)
T KOG1166|consen 697 GEKFCISKEIGEGSYGSVYVATHSN-GKLVALKVEKPPNPWEFYICLQVMERLKPQMLPSIMHISSAHVFQNASVLVSEY 775 (974)
T ss_pred ceeEEEEeeeccccceEEEEeecCC-CcEEEEEeecCCCceeeeehHHHHHhhchhhhcchHHHHHHHccCCcceeeeec
Confidence 4445667789999999999999776 99999999876542 233333311000
Q ss_pred -------HHhhcCCcCCCHHHHHHHHHHHHHHHHHHhcCCcccccCCCCCceEEcCC-------ceEEEeccccchhcc-
Q psy6828 95 -------DIMENEDVKLDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLVDSR-------WVVKLADFGLTEFKR- 159 (392)
Q Consensus 95 -------~~l~~~~~~l~~~~~~~i~~qi~~~l~ylH~~~iiiHrDlKp~NIll~~~-------~~~kl~DFGla~~~~- 159 (392)
++++ .....+|.-++.+..|++.-+..||..+| ||+||||+|.||... ..++|+|||.+--+.
T Consensus 776 ~~~Gtlld~~N-~~~~m~e~lv~~~~~qml~ive~lH~~~I-IHgDiKPDNfll~~~~~~~~~~~~l~lIDfG~siDm~l 853 (974)
T KOG1166|consen 776 SPYGTLLDLIN-TNKVMDEYLVMFFSCQMLRIVEHLHAMGI-IHGDIKPDNFLLRREICADSDSKGLYLIDFGRSIDMKL 853 (974)
T ss_pred cccccHHHhhc-cCCCCCchhhhHHHHHHHHHHHHHHhcce-ecccCCcceeEeecccCCCCcccceEEEecccceeeeE
Confidence 4444 44479999999999999999999999999 999999999999532 458999999886432
Q ss_pred --ccccccccccceeeeeeeccC-CCCcccccccccchhhhccCCHHHHH
Q psy6828 160 --DAEYTGTDQHSFLQHTYHVNR-AGSTESLHCKCDEALLFEMLPRSVAE 206 (392)
Q Consensus 160 --~~~~~~~d~~s~g~~~~~~~~-~~~~~~~d~~~~~~lL~~~lp~~v~~ 206 (392)
+...-......=+.-.+|.+. .+++-.+|+.-....+.-||-+...+
T Consensus 854 fp~~~~F~~~~~td~f~C~EM~~grpWtYq~DyfGlAa~~h~mLFG~y~q 903 (974)
T KOG1166|consen 854 FPDGTKFKAVWHTDLFDCIEMREGRPWTYQIDYFGLAATVHVMLFGKYME 903 (974)
T ss_pred cCCCcEEeeeeccccchhHHHhcCCCCchhhhhHHHHHHHHHHHHHHHHH
Confidence 111101110001112233222 44455566666666777777766666
No 432
>cd07556 Nucleotidyl_cyc_III Class III nucleotidyl cyclases. Class III nucleotidyl cyclases are the largest, most diverse group of nucleotidyl cyclases (NC's) containing prokaryotic and eukaryotic proteins. They can be divided into two major groups; the mononucleotidyl cyclases (MNC's) and the diguanylate cyclases (DGC's). The MNC's, which include the adenylate cyclases (AC's) and the guanylate cyclases (GC's), have a conserved cyclase homology domain (CHD), while the DGC's have a conserved GGDEF domain, named after a conserved motif within this subgroup. Their products, cyclic guanylyl and adenylyl nucleotides, are second messengers that play important roles in eukaryotic signal transduction and prokaryotic sensory pathways.
Probab=99.21 E-value=6.1e-10 Score=90.97 Aligned_cols=130 Identities=42% Similarity=0.678 Sum_probs=111.3
Q ss_pred eEEEeecccchhhhhccCChhhHHHhHHHHHHHHHHhhhhcCeEEEeeeCceeeeccCCCcCCCCccccccccccceeec
Q psy6828 222 VTIYFSDIVGFTAMSAESTPLQVVDFLNDLYTCFDSIVGNYDVYKVETIGDAYMVVSGLPIRNGEQHAVGNYDVYKVETI 301 (392)
Q Consensus 222 vtvlf~DI~~ft~l~~~~~p~~l~~~Ln~~~~~~~~~v~~~~g~~~~~~Gd~~~a~~g~~~~~~~~~~~~~~~~~~~~~~ 301 (392)
+++++.||.+|+.+.+....+...++|..+.+.+.+.+..+++.+..+.||.++++|..
T Consensus 2 ~~ll~i~i~~~~~i~~~~g~~~~~~~l~~~~~~l~~~~~~~~~~~~r~~~d~f~~l~~~--------------------- 60 (133)
T cd07556 2 VTILFADIVGFTSLADALGPDEGDELLNELAGRFDSLIRRSGDLKIKTIGDEFMVVSGL--------------------- 60 (133)
T ss_pred EEEEEEEchhhHHHHhcCCHHHHHHHHHHHHHHHHHHHHHcCcEEEEeecceEEEEECc---------------------
Confidence 57899999999999999999999999999999999999998899999999999877631
Q ss_pred cceeEEEeCCCCCCChhhHHHHHHHHHHHHHHHHHhcccCCCCCCceEEEEeeccceeEeeeccCCceeeeecchHHHHH
Q psy6828 302 GDAYMVVSGLPIRNGEQHAGEIASMSLDLLEAVKRFTVRHRPHDDLKLRIGIHSGPVCAGVVGLKMPRYCLFGDTVNTAS 381 (392)
Q Consensus 302 ~d~~~~~~g~~~~~~~~~a~~a~~~a~~~~~~~~~~~~~~~~~~~~~~~iGi~~G~v~~g~iG~~~~~y~~~G~~Vn~As 381 (392)
....++..++.++.+.+...... ....++++||++.|++..+..|. +..+..+|+.+|.|+
T Consensus 61 ----------------~~~~~~~~~~~~i~~~~~~~~~~--~~~~~~~~ig~~~g~~~~~~~~~-~~~~~~~~~~~~~a~ 121 (133)
T cd07556 61 ----------------DHPAAAVAFAEDMREAVSALNQS--EGNPVRVRIGIHTGPVVVGVIGS-RPQYDVWGALVNLAS 121 (133)
T ss_pred ----------------hHHHHHHHHHHHHHHHHHHHHhc--cCCceEEEEEEecccEEEEeccC-CccceEEcHHHHHHH
Confidence 14566777888888887664321 34568999999999999999998 668999999999999
Q ss_pred hhhhcCCCCC
Q psy6828 382 RMESTGEDVV 391 (392)
Q Consensus 382 Rle~~~~~g~ 391 (392)
++.+.++++.
T Consensus 122 ~a~~~a~~~~ 131 (133)
T cd07556 122 RMESQAKAGQ 131 (133)
T ss_pred HHHhcCCCCC
Confidence 9999999874
No 433
>PRK01723 3-deoxy-D-manno-octulosonic-acid kinase; Reviewed
Probab=99.20 E-value=9.9e-11 Score=106.19 Aligned_cols=47 Identities=30% Similarity=0.392 Sum_probs=43.2
Q ss_pred HHHHHHHHHHHHhcCCcccccCCCCCceEEcCCceEEEeccccchhcc
Q psy6828 112 LVADILRGMLYLHDSALRYHGNLKASNCLVDSRWVVKLADFGLTEFKR 159 (392)
Q Consensus 112 i~~qi~~~l~ylH~~~iiiHrDlKp~NIll~~~~~~kl~DFGla~~~~ 159 (392)
.+.|++.++.+||++|+ +||||||+|||++.++.++|+|||.++...
T Consensus 147 ~~~~i~~~l~~lH~~GI-~HrDlkp~NILv~~~~~v~LIDfg~~~~~~ 193 (239)
T PRK01723 147 QWQAIGQLIARFHDAGV-YHADLNAHNILLDPDGKFWLIDFDRGELRT 193 (239)
T ss_pred HHHHHHHHHHHHHHCCC-CCCCCCchhEEEcCCCCEEEEECCCcccCC
Confidence 46789999999999999 999999999999998999999999987654
No 434
>KOG0590|consensus
Probab=99.16 E-value=2.8e-11 Score=123.07 Aligned_cols=110 Identities=22% Similarity=0.279 Sum_probs=80.3
Q ss_pred ccCCCCCcceeEEEEEEEeecCcEEEEEEcCCC---ChhHHHH---HHHHHHH--------------------------H
Q psy6828 48 SSNPDSDFRYSAIFTPIGIYKGRIFAIKRIPKK---SVDITRA---MKKELKI--------------------------D 95 (392)
Q Consensus 48 ~~~~lg~G~~g~V~~~~~~~~~~~vAiK~~~~~---~~~~~~~---~~~E~~~--------------------------~ 95 (392)
..+.+|.|++|.|+........+.++.|..... .....+. +..|..+ +
T Consensus 322 ~~~~~g~ga~g~~~~~~~~~~~~~~~~~~~r~~~~~~~s~~~~~~~i~sE~~i~~~l~h~~~~e~l~~~~~~~~~~~~mE 401 (601)
T KOG0590|consen 322 PGRVLGSGAYGSVRIAKRRSDLKSFPEKEFRVRVKPTESERKYNYNITSEFCIGSSLSHPNIIETLDIVQEIDGILQSME 401 (601)
T ss_pred ccceeeecccCceEEEEecCCCccchhhhhhcccCCcccHHHHhhhhhhheeecccccCCchhhhHHHHhhcccchhhhh
Confidence 477899999999998887777776666655311 1111111 1112111 1
Q ss_pred Hhhc-------CCcCCCHHHHHHHHHHHHHHHHHHhcCCcccccCCCCCceEEcCCceEEEeccccchhc
Q psy6828 96 IMEN-------EDVKLDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLVDSRWVVKLADFGLTEFK 158 (392)
Q Consensus 96 ~l~~-------~~~~l~~~~~~~i~~qi~~~l~ylH~~~iiiHrDlKp~NIll~~~~~~kl~DFGla~~~ 158 (392)
|... ....++..++..+++|++.|+.|+|+.|+ .|||+||+|+++..+|.+||+|||.+...
T Consensus 402 ~~~~Dlf~~~~~~~~~~~~e~~c~fKqL~~Gv~y~h~~Gi-ahrdlK~enll~~~~g~lki~Dfg~~~vf 470 (601)
T KOG0590|consen 402 YCPYDLFSLVMSNGKLTPLEADCFFKQLLRGVKYLHSMGL-AHRDLKLENLLVTENGILKIIDFGAASVF 470 (601)
T ss_pred cccHHHHHHHhcccccchhhhhHHHHHHHHHHHHHHhcCc-eeccCccccEEEecCCceEEeecCcceee
Confidence 1111 12258889999999999999999999999 99999999999999999999999998754
No 435
>COG0515 SPS1 Serine/threonine protein kinase [General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair]
Probab=99.12 E-value=3.5e-10 Score=105.59 Aligned_cols=129 Identities=24% Similarity=0.334 Sum_probs=97.6
Q ss_pred ccCCCCCcceeEEEEEEEeecCcEEEEEEcCCCChh---HHHHHHHHHHH------------------------------
Q psy6828 48 SSNPDSDFRYSAIFTPIGIYKGRIFAIKRIPKKSVD---ITRAMKKELKI------------------------------ 94 (392)
Q Consensus 48 ~~~~lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~~~---~~~~~~~E~~~------------------------------ 94 (392)
....+|.|+|+.||.+.+. ..+++|.+...... ....+.+|...
T Consensus 4 ~~~~l~~g~~~~v~~~~~~---~~~~~k~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~ 80 (384)
T COG0515 4 ILRKLGEGSFGEVYLARDR---KLVALKVLAKKLESKSKEVERFLREIQILASLNHPPNIVKLYDFFQDEGSLYLVMEYV 80 (384)
T ss_pred eEEeecCCCCeEEEEEEec---cEEEEEeechhhccchhHHHHHHHHHHHHHHccCCcceeeEEEEEecCCEEEEEEecC
Confidence 3456889999999999877 88999999765432 35667777764
Q ss_pred ------HHhhcCC--cCCCHHHHHHHHHHHHHHHHHHhcCCcccccCCCCCceEEcCCc-eEEEeccccchhcccccccc
Q psy6828 95 ------DIMENED--VKLDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLVDSRW-VVKLADFGLTEFKRDAEYTG 165 (392)
Q Consensus 95 ------~~l~~~~--~~l~~~~~~~i~~qi~~~l~ylH~~~iiiHrDlKp~NIll~~~~-~~kl~DFGla~~~~~~~~~~ 165 (392)
+++.... ..++......++.|++.++.|+|+.++ +|||+||+||+++..+ .++++|||+++.........
T Consensus 81 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~H~~~~-~hrd~kp~nil~~~~~~~~~l~dfg~~~~~~~~~~~~ 159 (384)
T COG0515 81 DGGSLEDLLKKIGRKGPLSESEALFILAQILSALEYLHSKGI-IHRDIKPENILLDRDGRVVKLIDFGLAKLLPDPGSTS 159 (384)
T ss_pred CCCcHHHHHHhcccccCCCHHHHHHHHHHHHHHHHHHHhCCe-eccCCCHHHeeecCCCCeEEEeccCcceecCCCCccc
Confidence 2222222 258889999999999999999999999 9999999999999988 79999999998554433221
Q ss_pred ----ccccceeeeeeeccC
Q psy6828 166 ----TDQHSFLQHTYHVNR 180 (392)
Q Consensus 166 ----~d~~s~g~~~~~~~~ 180 (392)
......|...|..|+
T Consensus 160 ~~~~~~~~~~~t~~~~~pe 178 (384)
T COG0515 160 SIPALPSTSVGTPGYMAPE 178 (384)
T ss_pred cccccccccccccccCCHH
Confidence 224445666676555
No 436
>KOG4158|consensus
Probab=99.09 E-value=7.4e-10 Score=103.08 Aligned_cols=52 Identities=25% Similarity=0.320 Sum_probs=45.3
Q ss_pred CCHHHHHHHHHHHHHHHHHHhcCCcccccCCCCCceEEc--CC--ceEEEeccccch
Q psy6828 104 LDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLVD--SR--WVVKLADFGLTE 156 (392)
Q Consensus 104 l~~~~~~~i~~qi~~~l~ylH~~~iiiHrDlKp~NIll~--~~--~~~kl~DFGla~ 156 (392)
.+.....-++.|+++|+.|||.+|+ .|||+|++|||+. ++ -.+.++|||++-
T Consensus 338 ~s~r~~~~~laQlLEav~hL~~hgv-AhRDlKSDNiL~ElddD~~P~LVvaDFGCcL 393 (598)
T KOG4158|consen 338 RSYRTGRVILAQLLEAVTHLHKHGV-AHRDLKSDNILLELDDDEIPQLVVADFGCCL 393 (598)
T ss_pred CchHHHHHHHHHHHHHHHHHHHccc-hhhcccccceEEEecCCCCcEEEEcccceee
Confidence 6677778899999999999999999 9999999999993 33 358899999874
No 437
>cd05120 APH_ChoK_like Aminoglycoside 3'-phosphotransferase (APH) and Choline Kinase (ChoK) family. The APH/ChoK family is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). The family is composed of APH, ChoK, ethanolamine kinase (ETNK), macrolide 2'-phosphotransferase (MPH2'), an unusual homoserine kinase, and uncharacterized proteins with similarity to the N-terminal domain of acyl-CoA dehydrogenase 10 (ACAD10). The members of this family catalyze the transfer of the gamma-phosphoryl group from ATP (or CTP) to small molecule substrates such as aminoglycosides, macrolides, choline, ethanolamine, and homoserine. Phosphorylation of the antibiotics, aminoglycosides and macrolides, leads to their inactivation and to bacterial antibiotic resistance. Phosphorylation of choline, ethanolamine, and homoserine serves
Probab=99.09 E-value=6.6e-10 Score=92.45 Aligned_cols=105 Identities=16% Similarity=0.232 Sum_probs=77.8
Q ss_pred cCCCCCcceeEEEEEEEeecCcEEEEEEcCCCChhHHHHHHHHHHH----------------------------HHhhcC
Q psy6828 49 SNPDSDFRYSAIFTPIGIYKGRIFAIKRIPKKSVDITRAMKKELKI----------------------------DIMENE 100 (392)
Q Consensus 49 ~~~lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~~~~~~~~~~E~~~----------------------------~~l~~~ 100 (392)
.+.+|+|.++.||++... +..+++|....... ...+.+|... +++...
T Consensus 3 ~~~i~~g~~~~v~~~~~~--~~~~~iK~~~~~~~--~~~~~~e~~~~~~l~~~~~~~p~~~~~~~~~~~~~~v~e~~~g~ 78 (155)
T cd05120 3 IKLLKGGLTNRVYLLGTK--DEDYVLKINPSREK--GADREREVAILQLLARKGLPVPKVLASGESDGWSYLLMEWIEGE 78 (155)
T ss_pred ceecccccccceEEEEec--CCeEEEEecCCCCc--hhHHHHHHHHHHHHHHcCCCCCeEEEEcCCCCccEEEEEecCCe
Confidence 356899999999999864 47899999876542 2334444444 111111
Q ss_pred Cc-CCCHHHHHHHHHHHHHHHHHHhcC---CcccccCCCCCceEEcCCceEEEeccccchhc
Q psy6828 101 DV-KLDNMFIASLVADILRGMLYLHDS---ALRYHGNLKASNCLVDSRWVVKLADFGLTEFK 158 (392)
Q Consensus 101 ~~-~l~~~~~~~i~~qi~~~l~ylH~~---~iiiHrDlKp~NIll~~~~~~kl~DFGla~~~ 158 (392)
.. .++......++.+++.++.++|.. ++ +|+|+||+||++++.+.++++|||.++..
T Consensus 79 ~~~~~~~~~~~~~~~~~~~~l~~lh~~~~~~i-~H~Dl~~~Nil~~~~~~~~l~Df~~~~~~ 139 (155)
T cd05120 79 TLDEVSEEEKEDIAEQLAELLAKLHQLPLLVL-CHGDLHPGNILVDDGKILGIIDWEYAGYG 139 (155)
T ss_pred ecccCCHHHHHHHHHHHHHHHHHHhCCCceEE-EecCCCcceEEEECCcEEEEEecccccCC
Confidence 10 123466778899999999999985 57 99999999999999899999999998753
No 438
>smart00750 KIND kinase non-catalytic C-lobe domain. It is an interaction domain identified as being similar to the C-terminal protein kinase catalytic fold (C lobe). Its presence at the N terminus of signalling proteins and the absence of the active-site residues in the catalytic and activation loops suggest that it folds independently and is likely to be non-catalytic. The occurrence of KIND only in metazoa implies that it has evolved from the catalytic protein kinase domain into an interaction domain possibly by keeping the substrate-binding features
Probab=99.07 E-value=1.1e-10 Score=100.67 Aligned_cols=73 Identities=27% Similarity=0.269 Sum_probs=57.2
Q ss_pred HhhcCCcCCCHHHHHHHHHHHHHHHHHHhcCCcccccCCCCCceEEcCCceEEEeccccchhccccc-------------
Q psy6828 96 IMENEDVKLDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLVDSRWVVKLADFGLTEFKRDAE------------- 162 (392)
Q Consensus 96 ~l~~~~~~l~~~~~~~i~~qi~~~l~ylH~~~iiiHrDlKp~NIll~~~~~~kl~DFGla~~~~~~~------------- 162 (392)
++......+++.++..++.|++.||.|||+++ ||+|||++.++.+|+ ||+++......
T Consensus 6 ~l~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~-------kp~Nil~~~~~~~~~--fG~~~~~~~~~~~g~~~y~aPE~~ 76 (176)
T smart00750 6 ILEVRGRPLNEEEIWAVCLQCLRALRELHRQA-------KSGNILLTWDGLLKL--DGSVAFKTPEQSRVDPYFMAPEVI 76 (176)
T ss_pred HHHHhCCCCCHHHHHHHHHHHHHHHHHHHhcC-------CcccEeEcCccceee--ccceEeeccccCCCcccccChHHh
Confidence 44443446999999999999999999999876 999999999999999 99987643321
Q ss_pred -----cccccccceeeeeee
Q psy6828 163 -----YTGTDQHSFLQHTYH 177 (392)
Q Consensus 163 -----~~~~d~~s~g~~~~~ 177 (392)
....|+||+|+++|+
T Consensus 77 ~~~~~~~~~DiwSlG~il~e 96 (176)
T smart00750 77 QGQSYTEKADIYSLGITLYE 96 (176)
T ss_pred cCCCCcchhhHHHHHHHHHH
Confidence 112377777777776
No 439
>TIGR01982 UbiB 2-polyprenylphenol 6-hydroxylase. This model represents the enzyme (UbiB) which catalyzes the first hydroxylation step in the ubiquinone biosynthetic pathway in bacteria. It is believed that the reaction is 2-polyprenylphenol - 6-hydroxy-2-polyprenylphenol. This model finds hits primarily in the proteobacteria. The gene is also known as AarF in certain species.
Probab=99.06 E-value=6.4e-10 Score=109.58 Aligned_cols=49 Identities=18% Similarity=0.291 Sum_probs=41.4
Q ss_pred HHHHHHHH-HHHHHhcCCcccccCCCCCceEEcCCceEEEeccccchhccc
Q psy6828 111 SLVADILR-GMLYLHDSALRYHGNLKASNCLVDSRWVVKLADFGLTEFKRD 160 (392)
Q Consensus 111 ~i~~qi~~-~l~ylH~~~iiiHrDlKp~NIll~~~~~~kl~DFGla~~~~~ 160 (392)
.++.+++. .+..+|..|+ +|+|+||.||+++.++.++++|||++.....
T Consensus 260 ~ia~~~~~~~l~ql~~~g~-~H~D~hPgNilv~~~g~i~liDfG~~~~l~~ 309 (437)
T TIGR01982 260 ALAENLARSFLNQVLRDGF-FHADLHPGNIFVLKDGKIIALDFGIVGRLSE 309 (437)
T ss_pred HHHHHHHHHHHHHHHhCCc-eeCCCCcccEEECCCCcEEEEeCCCeeECCH
Confidence 45555555 3678899999 9999999999999999999999999877654
No 440
>KOG0606|consensus
Probab=99.04 E-value=9.8e-11 Score=120.52 Aligned_cols=96 Identities=27% Similarity=0.387 Sum_probs=71.2
Q ss_pred ccCCCCCcceeEEEEEEEeecCcEEEEEEcCCCChhHHHHHHHHHHH-----------HHhhcCCcCCCHHHHHHHHHHH
Q psy6828 48 SSNPDSDFRYSAIFTPIGIYKGRIFAIKRIPKKSVDITRAMKKELKI-----------DIMENEDVKLDNMFIASLVADI 116 (392)
Q Consensus 48 ~~~~lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~~~~~~~~~~E~~~-----------~~l~~~~~~l~~~~~~~i~~qi 116 (392)
..+.+..|+||.||..+|+.+.+.+|+ +++++.+-..+ ++.. ..+++.. .++ .++
T Consensus 87 ~IklisngAygavylvrh~~trqrfa~-kiNkq~lilRn----ilt~a~npfvvgDc~tllk~~g-~lP--------vdm 152 (1205)
T KOG0606|consen 87 TIKLISNGAYGAVYLVRHKETRQRFAM-KINKQNLILRN----ILTFAGNPFVVGDCATLLKNIG-PLP--------VDM 152 (1205)
T ss_pred eeEeeccCCCCceeeeeccccccchhh-cccccchhhhc----cccccCCcceechhhhhcccCC-CCc--------chh
Confidence 355688999999999999999999999 55554432111 1110 2222221 122 133
Q ss_pred HHHHHHHhcCCcccccCCCCCceEEcCCceEEEeccccchhc
Q psy6828 117 LRGMLYLHDSALRYHGNLKASNCLVDSRWVVKLADFGLTEFK 158 (392)
Q Consensus 117 ~~~l~ylH~~~iiiHrDlKp~NIll~~~~~~kl~DFGla~~~ 158 (392)
+.+++|+|+.+| +|||+||+|.+++.-|++|+.|||+++..
T Consensus 153 vla~Eylh~ygi-vhrdlkpdnllIT~mGhiKlTDfgLsk~G 193 (1205)
T KOG0606|consen 153 VLAVEYLHSYGI-VHRDLKPDNLLITSMGHIKLTDFGLSKKG 193 (1205)
T ss_pred hHHhHhhccCCe-ecCCCCCCcceeeecccccccchhhhhhh
Confidence 788999999999 99999999999999999999999999863
No 441
>PRK04750 ubiB putative ubiquinone biosynthesis protein UbiB; Reviewed
Probab=98.98 E-value=1e-09 Score=109.63 Aligned_cols=38 Identities=16% Similarity=0.285 Sum_probs=32.9
Q ss_pred HhcCCcccccCCCCCceEEcCCc----eEEEeccccchhcccc
Q psy6828 123 LHDSALRYHGNLKASNCLVDSRW----VVKLADFGLTEFKRDA 161 (392)
Q Consensus 123 lH~~~iiiHrDlKp~NIll~~~~----~~kl~DFGla~~~~~~ 161 (392)
++..|+ +|+|+||.||+++.++ .++++|||++...+..
T Consensus 276 if~~Gf-fHaDpHPGNIlv~~~g~~~~~i~llDFGivg~l~~~ 317 (537)
T PRK04750 276 VFRDGF-FHADMHPGNIFVSYDPPENPRYIALDFGIVGSLNKE 317 (537)
T ss_pred HHhCCe-eeCCCChHHeEEecCCCCCCeEEEEecceEEECCHH
Confidence 345899 9999999999999888 9999999999876543
No 442
>KOG0603|consensus
Probab=98.98 E-value=7.4e-11 Score=115.61 Aligned_cols=125 Identities=22% Similarity=0.280 Sum_probs=93.0
Q ss_pred CCCcceeEEEEEEE---eecCcEEEEEEcCCCChh--------HHHHHHHHHHH---------------------HHhhc
Q psy6828 52 DSDFRYSAIFTPIG---IYKGRIFAIKRIPKKSVD--------ITRAMKKELKI---------------------DIMEN 99 (392)
Q Consensus 52 lg~G~~g~V~~~~~---~~~~~~vAiK~~~~~~~~--------~~~~~~~E~~~---------------------~~l~~ 99 (392)
+|+|+||.|+++.. ...|..||+|.+.+.... ..+.+..++.. +++.+
T Consensus 2 lg~g~~gkvfLvrk~~g~da~~~yamkvl~k~t~~~~~~~~t~~er~il~~~~~~~f~v~lhyafqt~~kl~l~ld~~rg 81 (612)
T KOG0603|consen 2 LGQGSYGKVFLVRKAGGADAGHLYAMKVLKKATLKVRDRTHTKQERIILAFVHNTPFLVKLHYAFQTDGKLYLILDFLRG 81 (612)
T ss_pred CCcCCCcchHHHHHhccccccchhhhhcccccccccccccccccHHHHHhhccCCCceeeeeeeeccccchhHhhhhccc
Confidence 79999999998763 345678999998765431 11122222221 33333
Q ss_pred CC--------cCCCHHHHHHHHHHHHHHHHHHhcCCcccccCCCCCceEEcCCceEEEeccccchhcccccc--------
Q psy6828 100 ED--------VKLDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLVDSRWVVKLADFGLTEFKRDAEY-------- 163 (392)
Q Consensus 100 ~~--------~~l~~~~~~~i~~qi~~~l~ylH~~~iiiHrDlKp~NIll~~~~~~kl~DFGla~~~~~~~~-------- 163 (392)
+. ..+++.....+..+++.++.++|+.++ +|||+|++||+++.+|++|+.|||+++..-....
T Consensus 82 g~lft~l~~~~~f~~~~~~~~~aelaLald~lh~l~i-iyrd~k~enilld~~Ghi~~tdfglske~v~~~~~cgt~eym 160 (612)
T KOG0603|consen 82 GDLFTRLSKEVMFDELDVAFYLAELALALDHLHKLGI-AYRDYKLENVLLLLEGHIKLTDFGLSKEAVKEKIACGTYEYR 160 (612)
T ss_pred chhhhccccCCchHHHHHHHHHHHHHHHHhhcchhHH-HHhcccccceeecccCccccCCchhhhHhHhhhhcccchhhh
Confidence 21 147888889999999999999999999 9999999999999999999999999986433221
Q ss_pred ---------ccccccceeeeeee
Q psy6828 164 ---------TGTDQHSFLQHTYH 177 (392)
Q Consensus 164 ---------~~~d~~s~g~~~~~ 177 (392)
...|.||||++.++
T Consensus 161 ApEI~~gh~~a~D~ws~gvl~fe 183 (612)
T KOG0603|consen 161 APEIINGHLSAADWWSFGVLAFE 183 (612)
T ss_pred hhHhhhccCCcccchhhhhhHHH
Confidence 12399999999998
No 443
>cd05151 ChoK Choline Kinase (ChoK). The ChoK subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). It is composed of bacterial and eukaryotic choline kinases, as well as eukaryotic ethanolamine kinase. ChoK catalyzes the transfer of the gamma-phosphoryl group from ATP (or CTP) to its substrate, choline, producing phosphorylcholine (PCho), a precursor to the biosynthesis of two major membrane phospholipids, phosphatidylcholine (PC), and sphingomyelin (SM). Although choline is the preferred substrate, ChoK also shows substantial activity towards ethanolamine and its N-methylated derivatives. Bacterial ChoK is also referred to as licA protein. ETNK catalyzes the transfer of the gamma-phosphoryl group from CTP to ethanolamine (Etn), the first step in the CDP-Etn pathway for the formation of the major ph
Probab=98.90 E-value=4.2e-09 Score=90.10 Aligned_cols=103 Identities=16% Similarity=0.128 Sum_probs=72.1
Q ss_pred cCCCCCcceeEEEEEEEeecCcEEEEEEcCCCChhHHHHHHHHHHH-------------------------HHhhcCCcC
Q psy6828 49 SNPDSDFRYSAIFTPIGIYKGRIFAIKRIPKKSVDITRAMKKELKI-------------------------DIMENEDVK 103 (392)
Q Consensus 49 ~~~lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~~~~~~~~~~E~~~-------------------------~~l~~~~~~ 103 (392)
.++++.|.++.||++.. .++.|++|........ ...+.+|..+ +++....
T Consensus 3 ~~~l~~G~~~~vy~~~~--~~~~~~lK~~~~~~~~-~~~~~~E~~~l~~l~~~~~~P~~~~~~~~~~~lv~e~i~G~~-- 77 (170)
T cd05151 3 ISPLKGGMTNKNYRVEV--ANKKYVVRIPGNGTEL-LINRENEAENSKLAAEAGIGPKLYYFDPETGVLITEFIEGSE-- 77 (170)
T ss_pred eeecCCcccCceEEEEE--CCeEEEEEeCCCCccc-ccCHHHHHHHHHHHHHhCCCCceEEEeCCCCeEEEEecCCCc--
Confidence 35789999999999974 4889999998655311 1123344433 2222221
Q ss_pred CCH--HHHHHHHHHHHHHHHHHhcCCc----ccccCCCCCceEEcCCceEEEeccccchh
Q psy6828 104 LDN--MFIASLVADILRGMLYLHDSAL----RYHGNLKASNCLVDSRWVVKLADFGLTEF 157 (392)
Q Consensus 104 l~~--~~~~~i~~qi~~~l~ylH~~~i----iiHrDlKp~NIll~~~~~~kl~DFGla~~ 157 (392)
+.. .....++.+++.+|..||+.++ ++|+|++|.||+++ ++.++++||+.+..
T Consensus 78 l~~~~~~~~~~~~~l~~~l~~LH~~~~~~~~~~HgD~~~~Nil~~-~~~~~liDf~~a~~ 136 (170)
T cd05151 78 LLTEDFSDPENLEKIAKLLKKLHSSPLPDLVPCHNDLLPGNFLLD-DGRLWLIDWEYAGM 136 (170)
T ss_pred cccccccCHHHHHHHHHHHHHHhCCCCCCceeecCCCCcCcEEEE-CCeEEEEecccccC
Confidence 211 2234567899999999998773 39999999999998 67899999998774
No 444
>KOG1240|consensus
Probab=98.85 E-value=1.1e-09 Score=113.19 Aligned_cols=106 Identities=16% Similarity=0.170 Sum_probs=77.7
Q ss_pred ccCCCCCcceeEEEEEEEeecCcEEEEEEcCCCCh----hHHHHHHHHHHH-------------------------HHhh
Q psy6828 48 SSNPDSDFRYSAIFTPIGIYKGRIFAIKRIPKKSV----DITRAMKKELKI-------------------------DIME 98 (392)
Q Consensus 48 ~~~~lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~~----~~~~~~~~E~~~-------------------------~~l~ 98 (392)
-.+.||.+.|=+|.+|.+. ...|+||++-+... ...++-..|++. .|++
T Consensus 27 ~~~~LGstRFlKv~r~k~~--eG~vVvKVFvk~~p~~sL~~~~qrL~~ik~~l~~~pn~lPfqk~~~t~kAAylvRqyvk 104 (1431)
T KOG1240|consen 27 YVENLGSTRFLKVARAKDR--EGLVVVKVFVKQDPTISLRPFKQRLEEIKFALMKAPNCLPFQKVLVTDKAAYLVRQYVK 104 (1431)
T ss_pred eecccCchhhhhhhhccCC--CceEEEEEEeccCCCCCchHHHHHHHHHHHHhhcCCcccchHHHHHhhHHHHHHHHHHh
Confidence 3667999999999999754 33499999876542 222333333333 2221
Q ss_pred c-----CCc--CCCHHHHHHHHHHHHHHHHHHhcCCcccccCCCCCceEEcCCceEEEeccccch
Q psy6828 99 N-----EDV--KLDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLVDSRWVVKLADFGLTE 156 (392)
Q Consensus 99 ~-----~~~--~l~~~~~~~i~~qi~~~l~ylH~~~iiiHrDlKp~NIll~~~~~~kl~DFGla~ 156 (392)
+ -+. -+...+.+.|+-|++.||.-+|..|| .|+|||.+|||+++=..+.|+||..-+
T Consensus 105 hnLyDRlSTRPFL~~iEKkWiaFQLL~al~qcH~~gV-cHGDIKsENILiTSWNW~~LtDFAsFK 168 (1431)
T KOG1240|consen 105 HNLYDRLSTRPFLVLIEKKWIAFQLLKALSQCHKLGV-CHGDIKSENILITSWNWLYLTDFASFK 168 (1431)
T ss_pred hhhhhhhccchHHHHHHHHHHHHHHHHHHHHHHHcCc-cccccccceEEEeeechhhhhcccccC
Confidence 1 010 25666778899999999999999999 999999999999998889999997654
No 445
>cd05146 RIO3_euk RIO kinase family; eukaryotic RIO3, catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO3 is present only in multicellular eukaryotes. Its function is still unknown.
Probab=98.74 E-value=6e-08 Score=84.59 Aligned_cols=53 Identities=21% Similarity=0.160 Sum_probs=45.3
Q ss_pred CCHHHHHHHHHHHHHHHHHH-hcCCcccccCCCCCceEEcCCceEEEeccccchhc
Q psy6828 104 LDNMFIASLVADILRGMLYL-HDSALRYHGNLKASNCLVDSRWVVKLADFGLTEFK 158 (392)
Q Consensus 104 l~~~~~~~i~~qi~~~l~yl-H~~~iiiHrDlKp~NIll~~~~~~kl~DFGla~~~ 158 (392)
+++.+...++.|++.+|..+ |+.++ +|+||+|.|||++ ++.+.++|||-+-..
T Consensus 121 ~~~~~~~~i~~~i~~~l~~l~H~~gl-VHGDLs~~NIL~~-~~~v~iIDF~qav~~ 174 (197)
T cd05146 121 LNDEEMKNAYYQVLSMMKQLYKECNL-VHADLSEYNMLWH-DGKVWFIDVSQSVEP 174 (197)
T ss_pred cCHHHHHHHHHHHHHHHHHHHHhCCe-ecCCCCHHHEEEE-CCcEEEEECCCceeC
Confidence 45556778889999999998 89999 9999999999996 468999999976544
No 446
>KOG1033|consensus
Probab=98.69 E-value=4.1e-09 Score=101.64 Aligned_cols=95 Identities=20% Similarity=0.252 Sum_probs=72.8
Q ss_pred CCCHHHHHHHHHHHHHHHHHHhcCCcccccCCCCCceEEcCCceEEEeccccchhccccc----cccccccceeeeeeec
Q psy6828 103 KLDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLVDSRWVVKLADFGLTEFKRDAE----YTGTDQHSFLQHTYHV 178 (392)
Q Consensus 103 ~l~~~~~~~i~~qi~~~l~ylH~~~iiiHrDlKp~NIll~~~~~~kl~DFGla~~~~~~~----~~~~d~~s~g~~~~~~ 178 (392)
..+......++.|+..|+.| ++. +|||+||.||+...+..+||.|||+........ ....-.-..|..+|+.
T Consensus 355 ~~s~s~~~~~~~q~~~~~~y---k~~-ihrdlkp~nif~~~d~q~kIgDFgl~ts~~~~~~~~~~~a~~t~~~gt~~Yms 430 (516)
T KOG1033|consen 355 ERSLSLMLDIFKQIAPAVEY---KGL-IHRDLKPSNIFFSDDDQLKIGDFGLVTSQDKDETVAPAAASHTQQVGTLLYMS 430 (516)
T ss_pred ccchhHHHHHHHhhccchhh---ccc-hhhhccccccccccchhhhhhhhhheeecccCCcccchhhhhhhcccccccCC
Confidence 35666788999999999999 888 999999999999999999999999987655444 1111233468888886
Q ss_pred cC----CCCcccccccccchhhhccCC
Q psy6828 179 NR----AGSTESLHCKCDEALLFEMLP 201 (392)
Q Consensus 179 ~~----~~~~~~~d~~~~~~lL~~~lp 201 (392)
|+ ..+.+++|+..++-+|...+-
T Consensus 431 PEQi~g~~y~~kvdIyaLGlil~EL~~ 457 (516)
T KOG1033|consen 431 PEQIRGQQYSEKVDIYALGLILAELLI 457 (516)
T ss_pred HHHHhhhhhhhhcchhhHHHHHHHHHH
Confidence 65 456667777777777776654
No 447
>KOG3087|consensus
Probab=98.48 E-value=1.6e-06 Score=73.53 Aligned_cols=120 Identities=24% Similarity=0.224 Sum_probs=82.9
Q ss_pred cCCCCCcceeEEEEEEEeecCcEEEEEEcCCCCh--------hHHHHHHHHHHH--------------------------
Q psy6828 49 SNPDSDFRYSAIFTPIGIYKGRIFAIKRIPKKSV--------DITRAMKKELKI-------------------------- 94 (392)
Q Consensus 49 ~~~lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~~--------~~~~~~~~E~~~-------------------------- 94 (392)
...+-+|+-+.|+.+. ..|+...||.-..+.. -...+..+|...
T Consensus 12 l~likQGAEArv~~~~--~~Ge~~iIK~Rf~K~YRHP~LD~kLtr~Rt~~Ear~l~k~~~~GI~~P~l~~~D~~~~~i~M 89 (229)
T KOG3087|consen 12 LELIKQGAEARVPRGS--FSGEAAIIKERFSKRYRHPALDQKLTRKRTKQEARLLAKCRALGIPAPRLIFIDTYGGQIYM 89 (229)
T ss_pred ceeeeccceeeEeeec--cCCceeEEeecccccccchHHHHHHHHHHHHHHHHHHHHHHHhCCCCceEEEEecCCCeEEE
Confidence 3456688888888885 5699988886543321 123456667666
Q ss_pred ----------HHhh-cCCcCCCHHHHHHHHHHHHHHHHHHhcCCcccccCCCCCceEEcCCce---EEEeccccchhccc
Q psy6828 95 ----------DIME-NEDVKLDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLVDSRWV---VKLADFGLTEFKRD 160 (392)
Q Consensus 95 ----------~~l~-~~~~~l~~~~~~~i~~qi~~~l~ylH~~~iiiHrDlKp~NIll~~~~~---~kl~DFGla~~~~~ 160 (392)
+++. ..+.....+....++++|-+.+.-||..++ +|+||..+||++.+++. +.++|||++.....
T Consensus 90 E~~~g~~~vk~~i~~~~~~~~~d~~~~~~~~~iG~~igklH~ndi-iHGDLTTSNill~~~~~~~~~~lIdfgls~~s~~ 168 (229)
T KOG3087|consen 90 EFIDGASTVKDFILSTMEDESEDEGLAELARRIGELIGKLHDNDI-IHGDLTTSNILLRSDGNQITPILIDFGLSSVSRL 168 (229)
T ss_pred EeccchhHHHHHHHHHccCcccchhHHHHHHHHHHHHHHhhhCCe-ecccccccceEEecCCCcCceEEEeecchhcccC
Confidence 1111 111122333336788889899999999999 99999999999977653 58999999987766
Q ss_pred cccccccccce
Q psy6828 161 AEYTGTDQHSF 171 (392)
Q Consensus 161 ~~~~~~d~~s~ 171 (392)
.+....|.|.|
T Consensus 169 ~EDKgVDLYVl 179 (229)
T KOG3087|consen 169 PEDKGVDLYVL 179 (229)
T ss_pred cccccceeeee
Confidence 66555666643
No 448
>COG3642 Mn2+-dependent serine/threonine protein kinase [Signal transduction mechanisms]
Probab=98.43 E-value=5.2e-07 Score=76.60 Aligned_cols=116 Identities=23% Similarity=0.266 Sum_probs=75.5
Q ss_pred CCCCcceeEEEEEEEeecCcEEEEEEcCCCCh---h-----HHHHHHHHHHH--------------------------HH
Q psy6828 51 PDSDFRYSAIFTPIGIYKGRIFAIKRIPKKSV---D-----ITRAMKKELKI--------------------------DI 96 (392)
Q Consensus 51 ~lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~~---~-----~~~~~~~E~~~--------------------------~~ 96 (392)
.+.+|+-+.+|.+.. -|..+.+|.=.++.. . ..++..+|..+ ++
T Consensus 3 ~i~~GAEa~i~~~~~--~g~~av~K~Ri~K~YR~p~LD~klrr~Rt~~Earil~~a~~~GV~~P~v~dvD~~~~~I~me~ 80 (204)
T COG3642 3 LIKQGAEAIIYLTDF--LGLPAVVKERIPKRYRHPELDEKLRRERTRREARILAKAREAGVPVPIVYDVDPDNGLIVMEY 80 (204)
T ss_pred hhhCCcceeEEeeec--cCcceEEEeecCcccCChHHHHHHHHHHHHHHHHHHHHHHHcCCCCCeEEEEcCCCCEEEEEE
Confidence 467899999998853 355667775433321 2 23345556665 11
Q ss_pred hhcCCcC-CCHHHHHHHHHHHHHHHHHHhcCCcccccCCCCCceEEcCCceEEEeccccchhccccccccccccc
Q psy6828 97 MENEDVK-LDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLVDSRWVVKLADFGLTEFKRDAEYTGTDQHS 170 (392)
Q Consensus 97 l~~~~~~-l~~~~~~~i~~qi~~~l~ylH~~~iiiHrDlKp~NIll~~~~~~kl~DFGla~~~~~~~~~~~d~~s 170 (392)
++....+ .-+.....+++.+-.-+.-||..++ +|+||.++||++..++ +.++|||++.+....+....|+|.
T Consensus 81 I~G~~lkd~l~~~~~~~~r~vG~~vg~lH~~gi-vHGDLTtsNiIl~~~~-i~~IDfGLg~~s~~~Ed~aVDl~V 153 (204)
T COG3642 81 IEGELLKDALEEARPDLLREVGRLVGKLHKAGI-VHGDLTTSNIILSGGR-IYFIDFGLGEFSDEVEDKAVDLHV 153 (204)
T ss_pred eCChhHHHHHHhcchHHHHHHHHHHHHHHhcCe-ecCCCccceEEEeCCc-EEEEECCcccccccHHhhhchHHH
Confidence 1111100 0001123567777777888999999 9999999999997654 999999999987766666666653
No 449
>KOG0590|consensus
Probab=98.33 E-value=9.7e-08 Score=97.40 Aligned_cols=116 Identities=22% Similarity=0.259 Sum_probs=83.9
Q ss_pred eeeeccCCCCCcceeEEEEEEEee-cCcEEEEEEcCCCC--hhHHHHHHHHHHH--------------------------
Q psy6828 44 QVSLSSNPDSDFRYSAIFTPIGIY-KGRIFAIKRIPKKS--VDITRAMKKELKI-------------------------- 94 (392)
Q Consensus 44 ~~~~~~~~lg~G~~g~V~~~~~~~-~~~~vAiK~~~~~~--~~~~~~~~~E~~~-------------------------- 94 (392)
..|...+++|+|+|+.|-...... ....+|.|.+.... ....+....|..+
T Consensus 20 ~~~~~~~~ig~gs~~~~~~~~~~~~~~~~~a~~~~s~~~~~~~~~~~i~~e~~~~~~~s~h~n~~~~~~~~~~~~~~~~~ 99 (601)
T KOG0590|consen 20 SQYKLSRSIGKGSFSSSALASNSRDPESSSATKPISIPPKSEDSSEHIDTETDIQKKLSKHSNTVHMIEPSSSPRSYLLS 99 (601)
T ss_pred ccccccccccccccchhhhhhhcCCCcceeeccCCCCCCCccchhhhcCccccccccccccccccccCCccCCCcccccc
Confidence 345567789999999999887643 34567888776543 1222333333333
Q ss_pred ----------HHh-hcCCcCCCHHHHHHHHHHHHHHHHHHh-cCCcccccCCCCCceEEcCCc-eEEEeccccchhccc
Q psy6828 95 ----------DIM-ENEDVKLDNMFIASLVADILRGMLYLH-DSALRYHGNLKASNCLVDSRW-VVKLADFGLTEFKRD 160 (392)
Q Consensus 95 ----------~~l-~~~~~~l~~~~~~~i~~qi~~~l~ylH-~~~iiiHrDlKp~NIll~~~~-~~kl~DFGla~~~~~ 160 (392)
+.. .......+...+..++.|+..++.|+| ..++ .|||+||+|.+++..+ .+|++|||+|.....
T Consensus 100 ~~~s~g~~~f~~i~~~~~~~~~~~~~~~~~~ql~s~l~~~H~~~~~-~h~~ikP~n~~l~~s~~~l~~~df~~At~~~~ 177 (601)
T KOG0590|consen 100 LSYSDGGSLFSKISHPDSTGTSSSSASRYLPQLNSGLSYLHPENGV-THRDIKPSNSLLDESGSALKIADFGLATAYRN 177 (601)
T ss_pred cCcccccccccccccCCccCCCCcchhhhhhhhccCccccCccccc-ccCCCCCccchhccCCCcccCCCchhhccccc
Confidence 111 111114566778899999999999999 8899 9999999999999999 999999999987654
No 450
>PRK15123 lipopolysaccharide core heptose(I) kinase RfaP; Provisional
Probab=98.15 E-value=2.7e-05 Score=71.67 Aligned_cols=53 Identities=11% Similarity=0.155 Sum_probs=46.1
Q ss_pred CCHHHHHHHHHHHHHHHHHHhcCCcccccCCCCCceEEcC-------CceEEEeccccchh
Q psy6828 104 LDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLVDS-------RWVVKLADFGLTEF 157 (392)
Q Consensus 104 l~~~~~~~i~~qi~~~l~ylH~~~iiiHrDlKp~NIll~~-------~~~~kl~DFGla~~ 157 (392)
.+......++.+++..+.-||..|+ +|+|++|+|||++. +..+.++||+.++.
T Consensus 135 ~~~~~~~~ll~~la~~i~~LH~~Gi-~HgDL~~~NiLl~~~~~~~~~~~~~~LIDl~r~~~ 194 (268)
T PRK15123 135 PDPRLKRMLIKRVATMVRDMHAAGI-NHRDCYICHFLLHLPFPGREEDLKLSVIDLHRAQI 194 (268)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHCcC-ccCCCChhhEEEeccccCCCCCceEEEEECCcccc
Confidence 4455677899999999999999999 99999999999975 46799999998864
No 451
>PF01163 RIO1: RIO1 family; InterPro: IPR018934 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. This entry represents RIO kinase, they exhibit little sequence similarity with eukaryotic protein kinases, and are classified as atypical protein kinases []. The conformation of ATP when bound to the RIO kinases is unique when compared with ePKs, such as serine/threonine kinases or the insulin receptor tyrosine kinase, suggesting that the detailed mechanism by which the catalytic aspartate of RIO kinases participates in phosphoryl transfer may not be identical to that employed in known serine/threonine ePKs. Representatives of the RIO family are present in organisms varying from Archaea to humans, although the RIO3 proteins have only been identified in multicellular eukaryotes, to date. Yeast Rio1 and Rio2 proteins are required for proper cell cycle progression and chromosome maintenance, and are necessary for survival of the cells. These proteins are involved in the processing of 20 S pre-rRNA via late 18 S rRNA processing. ; GO: 0003824 catalytic activity, 0005524 ATP binding; PDB: 1TQP_A 1ZAR_A 1TQI_A 1ZAO_A 1TQM_A 3RE4_A 1ZTH_B 1ZP9_A 1ZTF_A.
Probab=97.98 E-value=2.9e-05 Score=67.47 Aligned_cols=52 Identities=31% Similarity=0.432 Sum_probs=39.6
Q ss_pred HHHHHHHHHHHHHHHHH-HhcCCcccccCCCCCceEEcCCceEEEeccccchhcc
Q psy6828 106 NMFIASLVADILRGMLY-LHDSALRYHGNLKASNCLVDSRWVVKLADFGLTEFKR 159 (392)
Q Consensus 106 ~~~~~~i~~qi~~~l~y-lH~~~iiiHrDlKp~NIll~~~~~~kl~DFGla~~~~ 159 (392)
......++.+++..+.. +|+.|+ +|+||.+.|||++++ .+.++|||-+....
T Consensus 105 ~~~~~~~~~~il~~~~~~~~~~gi-vHGDLs~~NIlv~~~-~~~iIDf~qav~~~ 157 (188)
T PF01163_consen 105 PEEPKELLEEILEEIIKMLHKAGI-VHGDLSEYNILVDDG-KVYIIDFGQAVDSS 157 (188)
T ss_dssp GSTHHHHHHHHHHHHHHHHHCTTE-EESS-STTSEEEETT-CEEE--GTTEEETT
T ss_pred chhHHHHHHHHHHHHHHHHHhcCc-eecCCChhhEEeecc-eEEEEecCcceecC
Confidence 34567788888886665 579999 999999999999887 99999999776443
No 452
>KOG0601|consensus
Probab=97.95 E-value=3.3e-06 Score=83.17 Aligned_cols=119 Identities=20% Similarity=0.178 Sum_probs=86.5
Q ss_pred ceeeeccCCCCC--cceeEEEEEEE--eecCcEEEEEEcCC--CChhHHHHHHHHHHH----------------------
Q psy6828 43 SQVSLSSNPDSD--FRYSAIFTPIG--IYKGRIFAIKRIPK--KSVDITRAMKKELKI---------------------- 94 (392)
Q Consensus 43 ~~~~~~~~~lg~--G~~g~V~~~~~--~~~~~~vAiK~~~~--~~~~~~~~~~~E~~~---------------------- 94 (392)
.+..-....+|. |.+|.||.+.. ..++..+|+|.-+. ........-.+|...
T Consensus 113 ~~~~~~~~~~g~~~g~~~s~~~~~~~~~~s~~~~a~k~s~~p~s~p~~~~~k~~~~~s~~~i~~~~~~v~~~~~~e~~~~ 192 (524)
T KOG0601|consen 113 DQRFPISSRTGSLPGSKGSVFKSRCTNSESPHKFAVKKSKIPFSPPLDSKRKLREFLSHHKIDSHENPVRDSPAWEGSGI 192 (524)
T ss_pred hhhcccccccccCCCCCceeecccCCcccCCcccccccccCCCCCccccccccchhhcccccCccccccccCcccccCCc
Confidence 444555778899 99999999998 78899999998321 110100111111111
Q ss_pred -------------HHhhcCCcCCCHHHHHHHHHHHHH----HHHHHhcCCcccccCCCCCceEEcCC-ceEEEeccccch
Q psy6828 95 -------------DIMENEDVKLDNMFIASLVADILR----GMLYLHDSALRYHGNLKASNCLVDSR-WVVKLADFGLTE 156 (392)
Q Consensus 95 -------------~~l~~~~~~l~~~~~~~i~~qi~~----~l~ylH~~~iiiHrDlKp~NIll~~~-~~~kl~DFGla~ 156 (392)
.+......-+++..++..+.+... ||.++|+.++ +|-|+||.||++..+ ..++++|||+..
T Consensus 193 lfiqtE~~~~sl~~~~~~~~~~~p~~~l~~~~~~~~~~~~~al~~~hs~~~-~~~~~kp~~i~~~~~~~s~~~~df~~v~ 271 (524)
T KOG0601|consen 193 LFIQTELCGESLQSYCHTPCNFLPDNLLWNSLRDWLSRDVTALSHLHSNNI-VHDDLKPANIFTTSDWTSCKLTDFGLVS 271 (524)
T ss_pred ceeeeccccchhHHhhhcccccCCchhhhhHHhhhhhcccccccccCCCcc-cccccchhheecccccceeecCCcceeE
Confidence 333333334788889999999999 9999999999 999999999999999 889999999987
Q ss_pred hccccc
Q psy6828 157 FKRDAE 162 (392)
Q Consensus 157 ~~~~~~ 162 (392)
.+.+..
T Consensus 272 ~i~~~~ 277 (524)
T KOG0601|consen 272 KISDGN 277 (524)
T ss_pred EccCCc
Confidence 665433
No 453
>KOG1243|consensus
Probab=97.91 E-value=6.9e-06 Score=82.02 Aligned_cols=119 Identities=14% Similarity=0.135 Sum_probs=87.5
Q ss_pred ccccccceeeeccccceeeeeeccccccccceeeeccCCCCCcceeEEEEEEEeecCcEEEEEEcCCCChhHHHHHHHHH
Q psy6828 13 SILRQSTVVKLVDNHKLFDWFCSWFQNVHTSQVSLSSNPDSDFRYSAIFTPIGIYKGRIFAIKRIPKKSVDITRAMKKEL 92 (392)
Q Consensus 13 ~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~~~~~~~~~~E~ 92 (392)
.+.+=++-|+-|+||||++|+.+|.+. |..|.++.+ +. ......+
T Consensus 55 ~~~~A~k~lKtlRHP~Il~yL~t~e~~------------------~~~ylvTEr----------V~-----Pl~~~lk-- 99 (690)
T KOG1243|consen 55 LAKRAVKRLKTLRHPNILSYLDTTEEE------------------GTLYLVTER----------VR-----PLETVLK-- 99 (690)
T ss_pred HHHHHHHHhhhccCchhhhhhhhhccc------------------CceEEEeec----------cc-----cHHHHHH--
Confidence 355568889999999999999999888 355666522 11 1111111
Q ss_pred HHHHhhcCCcCCCHHHHHHHHHHHHHHHHHHh-cCCcccccCCCCCceEEcCCceEEEeccccchhccccc---------
Q psy6828 93 KIDIMENEDVKLDNMFIASLVADILRGMLYLH-DSALRYHGNLKASNCLVDSRWVVKLADFGLTEFKRDAE--------- 162 (392)
Q Consensus 93 ~~~~l~~~~~~l~~~~~~~i~~qi~~~l~ylH-~~~iiiHrDlKp~NIll~~~~~~kl~DFGla~~~~~~~--------- 162 (392)
.++...+..-+.||+.||.||| .+++ +|.++.-+-++++..|..||++|-++.......
T Consensus 100 ----------~l~~~~v~~Gl~qIl~AL~FL~~d~~l-vHgNv~~~SVfVn~~GeWkLggle~v~~~~~~~~~~~~~~~~ 168 (690)
T KOG1243|consen 100 ----------ELGKEEVCLGLFQILAALSFLNDDCNL-VHGNVCKDSVFVNESGEWKLGGLELVSKASGFNAPAKSLYLI 168 (690)
T ss_pred ----------HhHHHHHHHHHHHHHHHHHHHhccCCe-eeccEeeeeEEEcCCCcEEEeeeEEEeccccCCcccccchhh
Confidence 2557778888999999999998 5666 999999999999999999999998764322111
Q ss_pred ---c---------ccccccceeeeeee
Q psy6828 163 ---Y---------TGTDQHSFLQHTYH 177 (392)
Q Consensus 163 ---~---------~~~d~~s~g~~~~~ 177 (392)
. ...|.|-||++.|+
T Consensus 169 ~s~~~P~~~~~s~~s~D~~~Lg~li~e 195 (690)
T KOG1243|consen 169 ESFDDPEEIDPSEWSIDSWGLGCLIEE 195 (690)
T ss_pred hcccChhhcCccccchhhhhHHHHHHH
Confidence 0 12389999999998
No 454
>cd05154 ACAD10_11_like Acyl-CoA dehydrogenase (ACAD) 10 and 11, N-terminal domain, and similar proteins. This subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). This subfamily is composed of bacterial and eukaryotic proteins with similarity to the N-terminal domains of vertebrate ACAD10 and ACAD11. ACADs are a family of flavoproteins that are involved in the beta-oxidation of fatty acyl-CoA derivatives. ACAD deficiency can cause metabolic disorders including muscle fatigue, hypoglycemia, and hepatic lipidosis, among them. There are at least 11 distinct ACADs, some of which show distinct substrate specificities to either straight-chain or branched-chain fatty acids. ACAD10 is widely expressed in human tissues and is highly expressed in liver, kidney, pancreas, and spleen. ACAD10 and ACAD11 contain
Probab=97.91 E-value=6.2e-05 Score=66.93 Aligned_cols=108 Identities=17% Similarity=0.225 Sum_probs=75.0
Q ss_pred cCCCCCcceeEEEEEEEeecCcEEEEEEcCCCCh-hHHHHHHHHHHH-------------------------------HH
Q psy6828 49 SNPDSDFRYSAIFTPIGIYKGRIFAIKRIPKKSV-DITRAMKKELKI-------------------------------DI 96 (392)
Q Consensus 49 ~~~lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~~-~~~~~~~~E~~~-------------------------------~~ 96 (392)
..+++.|..+.||++... +|+.+++|....... .....+.+|..+ ++
T Consensus 3 ~~~l~~G~~n~~~~v~~~-~g~~~ilK~~~~~~~~~~~~~~~~E~~~~~~l~~~~~~vp~~~~~~~~~~~~~~~~~v~e~ 81 (223)
T cd05154 3 VRQLSGGQSNLTYLLTAG-GGRRLVLRRPPPGALLPSAHDVAREYRVLRALAGTGVPVPKVLALCEDPSVLGTPFYVMER 81 (223)
T ss_pred ceecCCCccceEEEEEec-CCcceEEEeCCCcccCcccccHHHHHHHHHHhhCCCCCCCCEEEECCCCCccCCceEEEEE
Confidence 357899999999999753 368999999865432 123345555555 11
Q ss_pred hhcCC-------cCCCHHHHHHHHHHHHHHHHHHhcC-------------------------------------------
Q psy6828 97 MENED-------VKLDNMFIASLVADILRGMLYLHDS------------------------------------------- 126 (392)
Q Consensus 97 l~~~~-------~~l~~~~~~~i~~qi~~~l~ylH~~------------------------------------------- 126 (392)
+.... ..+++.+...++.+++..|.+||+.
T Consensus 82 i~G~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 161 (223)
T cd05154 82 VDGRVLRDRLLRPELSPEERRALARALADTLAALHSVDPAAVGLGDLGRPGGYLERQVARWRRQYDASRTDEPPAMERLL 161 (223)
T ss_pred eCCEecCCCCCCCCCCHHHHHHHHHHHHHHHHHHhCCChhhcCCcccCCCCchHHHHHHHHHHHHHhhcccccHHHHHHH
Confidence 11110 1245566778888999999888842
Q ss_pred ------------CcccccCCCCCceEEcC--CceEEEeccccchh
Q psy6828 127 ------------ALRYHGNLKASNCLVDS--RWVVKLADFGLTEF 157 (392)
Q Consensus 127 ------------~iiiHrDlKp~NIll~~--~~~~kl~DFGla~~ 157 (392)
..++|+|++|.||+++. ++.+.++||+.+..
T Consensus 162 ~~~~~~~~~~~~~~l~HgD~~~~Nil~~~~~~~~~~iID~e~~~~ 206 (223)
T cd05154 162 RWLEAHLPADSRPGLVHGDYRLGNVLFHPDEPRVVAVLDWELATL 206 (223)
T ss_pred HHHHhhCCCCCCcEEEECCCCcccEEEcCCCCcEEEEEecccccc
Confidence 11489999999999998 56789999998764
No 455
>KOG0601|consensus
Probab=97.89 E-value=1.2e-05 Score=79.35 Aligned_cols=107 Identities=24% Similarity=0.270 Sum_probs=79.0
Q ss_pred cCCCCCcceeEEEEEEEe-ecCcEEEEEEcCCCChhHH--HHHHHHHHH---------------------------HHhh
Q psy6828 49 SNPDSDFRYSAIFTPIGI-YKGRIFAIKRIPKKSVDIT--RAMKKELKI---------------------------DIME 98 (392)
Q Consensus 49 ~~~lg~G~~g~V~~~~~~-~~~~~vAiK~~~~~~~~~~--~~~~~E~~~---------------------------~~l~ 98 (392)
...+|.|.|+.|+..... .++..|++|.+.+...... ..-..|+.+ ++.+
T Consensus 270 v~~i~~~~~~~~~~~~~r~~~~~~Y~~ke~~~~l~~~~~di~sl~ev~l~~~l~~~~~~~g~~~~W~~~r~~~ip~e~~~ 349 (524)
T KOG0601|consen 270 VSKISDGNFSSVFKVSKRPEGDCIYAAKELLNGLATFASDIFSLGEVILEAILGSHLPSVGKNSSWSQLRQGYIPLEFCE 349 (524)
T ss_pred eEEccCCccccceeeeecCCCCceEeChhhhccccchHhhhcchhhhhHhhHhhcccccCCCCCCccccccccCchhhhc
Confidence 567899999999988744 5678999998866533211 112222222 3333
Q ss_pred cCCc--------CCCHHHHHHHHHHHHHHHHHHhcCCcccccCCCCCceEEcCC-ceEEEeccccch
Q psy6828 99 NEDV--------KLDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLVDSR-WVVKLADFGLTE 156 (392)
Q Consensus 99 ~~~~--------~l~~~~~~~i~~qi~~~l~ylH~~~iiiHrDlKp~NIll~~~-~~~kl~DFGla~ 156 (392)
.... .+++...+.+..|++.++.++|++.. +|+|+||+||++.++ +..++.|||+..
T Consensus 350 ~~s~~l~~~~~~~~d~~~~~~~~~q~~~~l~~i~s~~~-~~~d~~psni~i~~~~~~~~~~~~~~~t 415 (524)
T KOG0601|consen 350 GGSSSLRSVTSQMLDEDPRLRLTAQILTALNVIHSKLF-VHLDVKPSNILISNDGFFSKLGDFGCWT 415 (524)
T ss_pred CcchhhhhHHHHhcCcchhhhhHHHHHhccccccchhh-hcccccccceeeccchhhhhcccccccc
Confidence 3222 36667778899999999999999999 999999999999886 778899999875
No 456
>COG0661 AarF Predicted unusual protein kinase [General function prediction only]
Probab=97.82 E-value=7.6e-05 Score=74.61 Aligned_cols=37 Identities=24% Similarity=0.318 Sum_probs=32.5
Q ss_pred cCCcccccCCCCCceEEcCCceEEEeccccchhccccc
Q psy6828 125 DSALRYHGNLKASNCLVDSRWVVKLADFGLTEFKRDAE 162 (392)
Q Consensus 125 ~~~iiiHrDlKp~NIll~~~~~~kl~DFGla~~~~~~~ 162 (392)
..|. +|.|..|.||+++.+|.+.+.|||+...+.+..
T Consensus 283 ~dgf-fHaDpHpGNi~v~~~g~i~~lDfGi~g~l~~~~ 319 (517)
T COG0661 283 RDGF-FHADPHPGNILVRSDGRIVLLDFGIVGRLDPKF 319 (517)
T ss_pred hcCc-cccCCCccceEEecCCcEEEEcCcceecCCHHH
Confidence 3688 999999999999999999999999988765543
No 457
>PF06293 Kdo: Lipopolysaccharide kinase (Kdo/WaaP) family; InterPro: IPR010440 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. This entry represents lipopolysaccharide kinases which are related to protein kinases IPR000719 from INTERPRO. This family includes waaP (rfaP) gene product is required for the addition of phosphate to O-4 of the first heptose residue of the lipopolysaccharide (LPS) inner core region. It has previously been shown that WaaP is necessary for resistance to hydrophobic and polycationic antimicrobials in E. coli and that it is required for virulence in invasive strains of Salmonella enterica [].; GO: 0005524 ATP binding, 0016773 phosphotransferase activity, alcohol group as acceptor, 0009103 lipopolysaccharide biosynthetic process, 0016020 membrane
Probab=97.70 E-value=6.2e-05 Score=66.68 Aligned_cols=55 Identities=35% Similarity=0.474 Sum_probs=48.8
Q ss_pred CCHHHHHHHHHHHHHHHHHHhcCCcccccCCCCCceEEcCCc---eEEEeccccchhcc
Q psy6828 104 LDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLVDSRW---VVKLADFGLTEFKR 159 (392)
Q Consensus 104 l~~~~~~~i~~qi~~~l~ylH~~~iiiHrDlKp~NIll~~~~---~~kl~DFGla~~~~ 159 (392)
.+......++.+++..+.-||++|+ +|+|++|.|||++.++ .+.++||+-++...
T Consensus 115 ~~~~~~~~ll~~l~~~i~~lH~~gi-~H~Dl~~~NILv~~~~~~~~~~lIDld~~~~~~ 172 (206)
T PF06293_consen 115 LDPSQRRELLRALARLIAKLHDAGI-YHGDLNPSNILVDPDDGQYRFYLIDLDRMRFRP 172 (206)
T ss_pred cchhhHHHHHHHHHHHHHHHHHCcC-CCCCCCcccEEEeCCCCceeEEEEcchhceeCC
Confidence 4566778899999999999999999 9999999999999887 79999999877644
No 458
>COG0478 RIO-like serine/threonine protein kinase fused to N-terminal HTH domain [Signal transduction mechanisms]
Probab=97.67 E-value=0.00029 Score=63.70 Aligned_cols=108 Identities=19% Similarity=0.192 Sum_probs=75.7
Q ss_pred eeccCCCCCcceeEEEEEEEeecCcEEEEEEcCCCCh----------------------hHHHHHHHHHHH---------
Q psy6828 46 SLSSNPDSDFRYSAIFTPIGIYKGRIFAIKRIPKKSV----------------------DITRAMKKELKI--------- 94 (392)
Q Consensus 46 ~~~~~~lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~~----------------------~~~~~~~~E~~~--------- 94 (392)
...+.+||.|--+.||.|.+. .|.++|||.=+-... -.....++|.++
T Consensus 93 e~iG~~IGvGKEsdVY~~~~~-~g~~~~vKfHR~GrtsFrkvk~~R~y~~~~~h~sWl~~sRl~A~rEf~~L~~L~~~G~ 171 (304)
T COG0478 93 EAIGTKIGVGKESDVYVAIDP-KGRKVAVKFHRLGRTSFRKVKRNRDYLADKEHGSWLYVSRLAAEREFEALQRLYPEGV 171 (304)
T ss_pred HhhccccccCccceEEEEECC-CCCEEEEEEeecCchhhhhhcchhhhhccccCcchhhhHHHHHHHHHHHHHHhhhcCC
Confidence 445789999999999999855 789999996532110 011223444444
Q ss_pred ---------------HHhhcCC---cCCCHHHHHHHHHHHHHHHHHHhcCCcccccCCCCCceEEcCCceEEEeccccc
Q psy6828 95 ---------------DIMENED---VKLDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLVDSRWVVKLADFGLT 155 (392)
Q Consensus 95 ---------------~~l~~~~---~~l~~~~~~~i~~qi~~~l~ylH~~~iiiHrDlKp~NIll~~~~~~kl~DFGla 155 (392)
++++... .+++.+....++..|++-+.-+-..|+ +|+|+.+=||+++++|.+.++||-=+
T Consensus 172 ~VP~P~~~nRHaVvMe~ieG~eL~~~r~~~en~~~il~~il~~~~~~~~~Gi-VHGDlSefNIlV~~dg~~~vIDwPQ~ 249 (304)
T COG0478 172 KVPKPIAWNRHAVVMEYIEGVELYRLRLDVENPDEILDKILEEVRKAYRRGI-VHGDLSEFNILVTEDGDIVVIDWPQA 249 (304)
T ss_pred CCCCccccccceeeeehcccceeecccCcccCHHHHHHHHHHHHHHHHHcCc-cccCCchheEEEecCCCEEEEeCccc
Confidence 2222211 123466677777777777766668899 99999999999999999999999644
No 459
>PRK09902 hypothetical protein; Provisional
Probab=97.50 E-value=0.0012 Score=58.13 Aligned_cols=103 Identities=13% Similarity=0.114 Sum_probs=74.4
Q ss_pred CCCcceeEEEEEEEeecCcEEEEEEcCCC---C---hhHHHHHHHHHHH-------------------------------
Q psy6828 52 DSDFRYSAIFTPIGIYKGRIFAIKRIPKK---S---VDITRAMKKELKI------------------------------- 94 (392)
Q Consensus 52 lg~G~~g~V~~~~~~~~~~~vAiK~~~~~---~---~~~~~~~~~E~~~------------------------------- 94 (392)
-|+||-+-|+... ..|+.|=+|.-... + ......+.+|...
T Consensus 26 ~~rgG~SgV~r~~--~~g~~~ylKrq~nhl~~s~r~P~g~ptf~rE~~~L~~L~~~GvPVP~pvf~~~~k~~~~~rA~LV 103 (216)
T PRK09902 26 YRRNGMSGVQCVE--RNGKKLYVKRMTHHLFHSVRYPFGRPTIVREVAVIKELERAGVIVPKIVFGEAVKIEGEWRALLV 103 (216)
T ss_pred cCCCCcceEEEEE--eCCcEEEEEeccCcccccccCCCCchHHHHHHHHHHHHHHcCCCCCccceeeeeccCCceEEEEE
Confidence 5678888888864 33557888876421 1 1233456777665
Q ss_pred -----------HHhhcCCc-CCCHHHHHHHHHHHHHHHHHHhcCCcccccCCCCCceEEcCCce--EEEeccccchh
Q psy6828 95 -----------DIMENEDV-KLDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLVDSRWV--VKLADFGLTEF 157 (392)
Q Consensus 95 -----------~~l~~~~~-~l~~~~~~~i~~qi~~~l~ylH~~~iiiHrDlKp~NIll~~~~~--~kl~DFGla~~ 157 (392)
+++.+... +.+..+...++.+++..+.-||+.|+ .|+|+-|.||+++.++. ++++||--++.
T Consensus 104 Te~L~g~~~L~~~l~~~~~~~~~~~~k~~il~~va~~ia~LH~~Gv-~Hgdly~khIll~~~g~~~v~lIDlEk~r~ 179 (216)
T PRK09902 104 TEDMAGFISIADWYAQHAVSPYSDEVRQAMLKAVALAFKKMHSVNR-QHGCCYVRHIYVKTEGKAEAGFLDLEKSRR 179 (216)
T ss_pred EEeCCCCccHHHHHhcCCcCCcchHHHHHHHHHHHHHHHHHHHCCC-cCCCCCHhheeecCCCCeeEEEEEhhccch
Confidence 33433221 35666667899999999999999999 99999999999986666 99999976654
No 460
>KOG1266|consensus
Probab=97.39 E-value=0.00022 Score=65.69 Aligned_cols=99 Identities=18% Similarity=0.275 Sum_probs=67.1
Q ss_pred eeeccccceeeeeeccccccccceeeeccCCCCCcceeEEEEEEEeecCcEEEEEEcCCCChhHHHHHHHHHHHHHhhcC
Q psy6828 21 VKLVDNHKLFDWFCSWFQNVHTSQVSLSSNPDSDFRYSAIFTPIGIYKGRIFAIKRIPKKSVDITRAMKKELKIDIMENE 100 (392)
Q Consensus 21 l~~l~hpniv~~~~~~~~~~~~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~~~~~~~~~~E~~~~~l~~~ 100 (392)
|-+|.|.|+|++...|.+...... ..-.+.+|.+.... .+.|+++.. ..
T Consensus 121 llqlvHsnlvkfH~yw~d~K~~e~-----------------------~rviFiteymssgs---~~~fLkrt~-----~~ 169 (458)
T KOG1266|consen 121 LLQLVHSNLVKFHKYWTDKKYEEK-----------------------PRVIFITEYMSSGS---LKQFLKRTK-----KN 169 (458)
T ss_pred HHHHHHHHHHHHHHhhcccccccc-----------------------cceEEEEecccchh---HHHHHHHHH-----Hh
Confidence 446779999999999987621000 01122333333222 233333222 22
Q ss_pred CcCCCHHHHHHHHHHHHHHHHHHhcCCc-ccccCCCCCceEEcCCceEEEe
Q psy6828 101 DVKLDNMFIASLVADILRGMLYLHDSAL-RYHGNLKASNCLVDSRWVVKLA 150 (392)
Q Consensus 101 ~~~l~~~~~~~i~~qi~~~l~ylH~~~i-iiHrDlKp~NIll~~~~~~kl~ 150 (392)
...+......+|+.||++||.|||+... ++|..+...-|++..+|-+|+.
T Consensus 170 ~~a~~~~~wkkw~tqIlsal~yLhs~~PpiihgnlTc~tifiq~ngLIkig 220 (458)
T KOG1266|consen 170 QKALFQKAWKKWCTQILSALSYLHSCDPPIIHGNLTCDTIFIQHNGLIKIG 220 (458)
T ss_pred hhhhhHHHHHHHHHHHHhhhhhhhccCCccccCCcchhheeecCCceEEec
Confidence 2358888899999999999999998765 6999999999999998888865
No 461
>KOG0195|consensus
Probab=97.15 E-value=0.00039 Score=62.39 Aligned_cols=135 Identities=15% Similarity=0.187 Sum_probs=84.2
Q ss_pred cccccccceeeeccccceeeeeeccccccccceeeeccCCCCCcceeEEEEEEEeecCcEEEEEEc-CCCChhHHHHHHH
Q psy6828 12 NSILRQSTVVKLVDNHKLFDWFCSWFQNVHTSQVSLSSNPDSDFRYSAIFTPIGIYKGRIFAIKRI-PKKSVDITRAMKK 90 (392)
Q Consensus 12 ~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vAiK~~-~~~~~~~~~~~~~ 90 (392)
+.+..|.-.|+-++||||+....++...+. .|.|-.. +..++.. +.
T Consensus 232 rdfneefp~lrifshpnilpvlgacnsppn-----------------------------lv~isq~mp~gslyn---vl- 278 (448)
T KOG0195|consen 232 RDFNEEFPALRIFSHPNILPVLGACNSPPN-----------------------------LVIISQYMPFGSLYN---VL- 278 (448)
T ss_pred chhhhhCcceeeecCCchhhhhhhccCCCC-----------------------------ceEeeeeccchHHHH---HH-
Confidence 567788889999999999888776665532 2222222 1111110 11
Q ss_pred HHHHHHhhcCCcCCCHHHHHHHHHHHHHHHHHHhcCCc-ccccCCCCCceEEcCCceEEE--eccccchhccccc-----
Q psy6828 91 ELKIDIMENEDVKLDNMFIASLVADILRGMLYLHDSAL-RYHGNLKASNCLVDSRWVVKL--ADFGLTEFKRDAE----- 162 (392)
Q Consensus 91 E~~~~~l~~~~~~l~~~~~~~i~~qi~~~l~ylH~~~i-iiHrDlKp~NIll~~~~~~kl--~DFGla~~~~~~~----- 162 (392)
-+..+.-.+..++.+++.+++.|+.|||+... |..--|.+..++++++.+.+| +|--++-......
T Consensus 279 ------he~t~vvvd~sqav~faldiargmaflhslep~ipr~~lns~hvmidedltarismad~kfsfqe~gr~y~paw 352 (448)
T KOG0195|consen 279 ------HEQTSVVVDHSQAVRFALDIARGMAFLHSLEPMIPRFYLNSKHVMIDEDLTARISMADTKFSFQEVGRAYSPAW 352 (448)
T ss_pred ------hcCccEEEecchHHHHHHHHHhhHHHHhhcchhhhhhhcccceEEecchhhhheecccceeeeeccccccCccc
Confidence 11122246778899999999999999998654 234467888899999876554 4422221111111
Q ss_pred --------------cccccccceeeeeee--ccCCCCcc
Q psy6828 163 --------------YTGTDQHSFLQHTYH--VNRAGSTE 185 (392)
Q Consensus 163 --------------~~~~d~~s~g~~~~~--~~~~~~~~ 185 (392)
....|+|||.+++|| +++.++.+
T Consensus 353 mspealqrkped~n~raadmwsfaillwel~trevpfad 391 (448)
T KOG0195|consen 353 MSPEALQRKPEDLNIRAADMWSFAILLWELNTREVPFAD 391 (448)
T ss_pred CCHHHHhcCchhcchhhhhHHHHHHHHHHhhcccccccc
Confidence 112399999999999 66655554
No 462
>PF06176 WaaY: Lipopolysaccharide core biosynthesis protein (WaaY); InterPro: IPR009330 This family consists of several bacterial lipopolysaccharide core biosynthesis proteins (WaaY or RfaY). The waaY, waaQ, and waaP genes are located in the central operon of the waa (formerly rfa) locus on the chromosome of Escherichia coli. This locus contains genes whose products are involved in the assembly of the core region of the lipopolysaccharide molecule. WaaY is the enzyme that phosphorylates HepII in this system [].; GO: 0009244 lipopolysaccharide core region biosynthetic process
Probab=97.12 E-value=0.0022 Score=56.76 Aligned_cols=44 Identities=25% Similarity=0.457 Sum_probs=37.1
Q ss_pred HHHHHHHHHHHHhcCCcccccCCCCCceEEcCCceEEEeccccchh
Q psy6828 112 LVADILRGMLYLHDSALRYHGNLKASNCLVDSRWVVKLADFGLTEF 157 (392)
Q Consensus 112 i~~qi~~~l~ylH~~~iiiHrDlKp~NIll~~~~~~kl~DFGla~~ 157 (392)
+..++.+++.-+|+.|. .|+|..|.|++++++ .++++||+..+.
T Consensus 140 ~~~ki~~~ikqlH~~G~-~HGD~hpgNFlv~~~-~i~iID~~~k~~ 183 (229)
T PF06176_consen 140 LAEKIVEAIKQLHKHGF-YHGDPHPGNFLVSNN-GIRIIDTQGKRM 183 (229)
T ss_pred HHHHHHHHHHHHHHcCC-ccCCCCcCcEEEECC-cEEEEECccccc
Confidence 44567778999999999 999999999999855 499999987654
No 463
>COG1718 RIO1 Serine/threonine protein kinase involved in cell cycle control [Signal transduction mechanisms / Cell division and chromosome partitioning]
Probab=97.11 E-value=0.0023 Score=57.32 Aligned_cols=107 Identities=22% Similarity=0.231 Sum_probs=72.9
Q ss_pred cCCCCCcceeEEEEEEEeecCcEEEEEEcCCCChh---HHH---------------------HHHHHHHH----------
Q psy6828 49 SNPDSDFRYSAIFTPIGIYKGRIFAIKRIPKKSVD---ITR---------------------AMKKELKI---------- 94 (392)
Q Consensus 49 ~~~lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~~~---~~~---------------------~~~~E~~~---------- 94 (392)
..+++.|--+.||+|. ..++..+|+|+....... ..+ ...+|...
T Consensus 53 ~g~istGKEA~Vy~a~-~~~~~~~avKiyr~~t~~fk~~~~Yi~gd~Rf~~~~~~rr~lv~~W~~kEf~NL~R~~eAGVr 131 (268)
T COG1718 53 VGCISTGKEANVYLAE-TGDGRYVAVKIYRTSTSEFKRIRRYIQGDPRFRNSRSNRRKLVFAWARKEFRNLKRAYEAGVR 131 (268)
T ss_pred EeeecCCcceEEEeec-cCCCceEEEEEEehhhhhhhhHHHHHhcChhhhcCCCCHHHHHHHHHHHHHHHHHHHHHcCCC
Confidence 4478889999999997 356889999998643221 001 11112221
Q ss_pred --------------HHhhcC--------CcCCCHHHHHHHHHHHHHHHHHHhc-CCcccccCCCCCceEEcCCceEEEec
Q psy6828 95 --------------DIMENE--------DVKLDNMFIASLVADILRGMLYLHD-SALRYHGNLKASNCLVDSRWVVKLAD 151 (392)
Q Consensus 95 --------------~~l~~~--------~~~l~~~~~~~i~~qi~~~l~ylH~-~~iiiHrDlKp~NIll~~~~~~kl~D 151 (392)
+++... +..+..+++..+..+++..+.-|-. .+. +|.||+.=|||+. ++.+.++|
T Consensus 132 vP~Pi~~~~nVLvMEfIg~~g~pAP~LkDv~~e~~e~~~~~~~~v~~~~~l~~~a~L-VHgDLSEyNiL~~-~~~p~iID 209 (268)
T COG1718 132 VPEPIAFRNNVLVMEFIGDDGLPAPRLKDVPLELEEAEGLYEDVVEYMRRLYKEAGL-VHGDLSEYNILVH-DGEPYIID 209 (268)
T ss_pred CCCceeecCCeEEEEeccCCCCCCCCcccCCcCchhHHHHHHHHHHHHHHHHHhcCc-ccccchhhheEEE-CCeEEEEE
Confidence 222222 1124444677788888888887765 888 9999999999998 88999999
Q ss_pred cccchhc
Q psy6828 152 FGLTEFK 158 (392)
Q Consensus 152 FGla~~~ 158 (392)
||=|...
T Consensus 210 ~~QaV~~ 216 (268)
T COG1718 210 VSQAVTI 216 (268)
T ss_pred Ccccccc
Confidence 9976544
No 464
>KOG1235|consensus
Probab=96.93 E-value=0.0072 Score=60.58 Aligned_cols=55 Identities=16% Similarity=0.257 Sum_probs=37.9
Q ss_pred CCHHHHHHHHHHHHHHHHHHhcCCcccccCCCCCceEEcC----CceEEEeccccchhcccc
Q psy6828 104 LDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLVDS----RWVVKLADFGLTEFKRDA 161 (392)
Q Consensus 104 l~~~~~~~i~~qi~~~l~ylH~~~iiiHrDlKp~NIll~~----~~~~kl~DFGla~~~~~~ 161 (392)
++...+..-+.+...-+.+ ..|. +|.|-.|.||++.+ ++.+.+-|||+.......
T Consensus 300 i~~~~i~~~l~~~~~~qIf--~~Gf-fHaDPHPGNilv~~~~~~~~~ivllDhGl~~~is~~ 358 (538)
T KOG1235|consen 300 ISPHDILNKLVEAYLEQIF--KTGF-FHADPHPGNILVRPNPEGDEEIVLLDHGLYAVISHK 358 (538)
T ss_pred CCHHHHHHHHHHHHHHHHH--hcCC-ccCCCCCCcEEEecCCCCCccEEEEcccccccccHH
Confidence 4555444444443332222 4578 99999999999984 567999999998876543
No 465
>KOG3741|consensus
Probab=96.85 E-value=0.0049 Score=60.50 Aligned_cols=60 Identities=15% Similarity=0.309 Sum_probs=53.7
Q ss_pred cCCCHHHHHHHHHHHHHHHHHHhcCCcccccCCCCCceEEcCCceEEEeccccchhccccc
Q psy6828 102 VKLDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLVDSRWVVKLADFGLTEFKRDAE 162 (392)
Q Consensus 102 ~~l~~~~~~~i~~qi~~~l~ylH~~~iiiHrDlKp~NIll~~~~~~kl~DFGla~~~~~~~ 162 (392)
...+|..++.++.|+..||.++|+.|. .=+-|.|.+||++.+.+++|+.-|+...+..+.
T Consensus 388 ~~~~e~~lW~y~~QLtaaL~sIHssGL-Ack~L~~~kIlv~G~~RIriS~C~i~Dvl~~d~ 447 (655)
T KOG3741|consen 388 LKAPEEVLWSYISQLTAALYSIHSSGL-ACKTLDLKKILVTGKMRIRISGCGIMDVLQEDP 447 (655)
T ss_pred CCchHHHHHHHHHHHHHHHHHHHhcCc-eeecccHhHeEeeCcceEEEecccceeeecCCC
Confidence 368899999999999999999999999 779999999999999899999888888766554
No 466
>KOG2137|consensus
Probab=96.54 E-value=0.0027 Score=64.20 Aligned_cols=54 Identities=20% Similarity=0.301 Sum_probs=43.2
Q ss_pred HHHHHHHHHHHHHHHHHHhc-CCcccccCCCCCceEEcCCceEEEeccccchhccc
Q psy6828 106 NMFIASLVADILRGMLYLHD-SALRYHGNLKASNCLVDSRWVVKLADFGLTEFKRD 160 (392)
Q Consensus 106 ~~~~~~i~~qi~~~l~ylH~-~~iiiHrDlKp~NIll~~~~~~kl~DFGla~~~~~ 160 (392)
.+....=+.+.+.|+.|+|. .++ ||+.|.|++|.++..+..||+.|+++.....
T Consensus 98 Te~~f~nl~~v~dgl~flh~sAk~-VH~ni~p~~i~~na~~~wkl~Gf~f~v~~~~ 152 (700)
T KOG2137|consen 98 TEDGFANLGNVADGLAFLHRSAKV-VHGNIQPEAIVVNANGDWKLAGFSFCVNANG 152 (700)
T ss_pred ccHhhhhhhcccchhhhhccCcce-eecccchhheeeccCcceeeccchhhhccCC
Confidence 33444445567799999996 456 9999999999999999999999998865444
No 467
>COG2112 Predicted Ser/Thr protein kinase [Signal transduction mechanisms]
Probab=96.40 E-value=0.035 Score=47.30 Aligned_cols=103 Identities=21% Similarity=0.282 Sum_probs=66.5
Q ss_pred cCCCCCcceeEEEEEEEeecCcEEEEEEcCCCChhHHHHHHHHHHH-----------------------HHhhcCCcCCC
Q psy6828 49 SNPDSDFRYSAIFTPIGIYKGRIFAIKRIPKKSVDITRAMKKELKI-----------------------DIMENEDVKLD 105 (392)
Q Consensus 49 ~~~lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~~~~~~~~~~E~~~-----------------------~~l~~~~~~l~ 105 (392)
...|++|++|.||+|. +.|..+|+|+-+..+. ...+..|.++ +|+... +|.
T Consensus 27 ~~~L~KG~~s~Vyl~~--~~~~~~a~Kvrr~ds~--r~~l~kEakiLeil~g~~~~p~vy~yg~~~i~me~i~G~--~L~ 100 (201)
T COG2112 27 EKELAKGTTSVVYLGE--WRGGEVALKVRRRDSP--RRNLEKEAKILEILAGEGVTPEVYFYGEDFIRMEYIDGR--PLG 100 (201)
T ss_pred hhhhhcccccEEEEee--ccCceEEEEEecCCcc--hhhHHHHHHHHHHhhhcCCCceEEEechhhhhhhhhcCc--chh
Confidence 5679999999999996 4477999998765543 3456667765 333322 232
Q ss_pred HHHH---HHHHHHHHHHHHHHhcCCcccccCCC-CCceEEcCCceEEEeccccchhc
Q psy6828 106 NMFI---ASLVADILRGMLYLHDSALRYHGNLK-ASNCLVDSRWVVKLADFGLTEFK 158 (392)
Q Consensus 106 ~~~~---~~i~~qi~~~l~ylH~~~iiiHrDlK-p~NIll~~~~~~kl~DFGla~~~ 158 (392)
.... ..-+..+++.---|-..|| -|..|. |...++.+++.+.|+||-.|++.
T Consensus 101 ~~~~~~~rk~l~~vlE~a~~LD~~GI-~H~El~~~~k~vlv~~~~~~iIDFd~At~k 156 (201)
T COG2112 101 KLEIGGDRKHLLRVLEKAYKLDRLGI-EHGELSRPWKNVLVNDRDVYIIDFDSATFK 156 (201)
T ss_pred hhhhcccHHHHHHHHHHHHHHHHhcc-chhhhcCCceeEEecCCcEEEEEccchhhc
Confidence 2222 3334455555334556777 787775 44555556668999999988754
No 468
>TIGR02172 Fb_sc_TIGR02172 Fibrobacter succinogenes paralogous family TIGR02172. This model describes a paralogous family of five proteins, likely to be enzymes, in the rumen bacterium Fibrobacter succinogenes S85. Members show homology to proteins described by PFAM model pfam01636, a phosphotransferase enzyme family associated with resistance to aminoglycoside antibiotics. However, members of this family score below the current trusted and noise cutoffs for pfam01636.
Probab=96.36 E-value=0.026 Score=50.67 Aligned_cols=28 Identities=18% Similarity=0.337 Sum_probs=24.7
Q ss_pred ccccCCCCCceEEcCCceEEEeccccchh
Q psy6828 129 RYHGNLKASNCLVDSRWVVKLADFGLTEF 157 (392)
Q Consensus 129 iiHrDlKp~NIll~~~~~~kl~DFGla~~ 157 (392)
.+|+|+.|.||++++++ +.++||+.+..
T Consensus 155 ~~HgD~~~~Nii~~~~~-~~iIDwe~a~~ 182 (226)
T TIGR02172 155 CLHGDFQIGNLITSGKG-TYWIDLGDFGY 182 (226)
T ss_pred eEecCCCCCcEEEcCCC-cEEEechhcCc
Confidence 47999999999999888 99999997753
No 469
>PF13095 FTA2: Kinetochore Sim4 complex subunit FTA2
Probab=95.69 E-value=0.043 Score=48.05 Aligned_cols=38 Identities=26% Similarity=0.358 Sum_probs=32.4
Q ss_pred HHHHHHHHHHHHhcCCcccccCCCCCceEEcCCceEEEeccccc
Q psy6828 112 LVADILRGMLYLHDSALRYHGNLKASNCLVDSRWVVKLADFGLT 155 (392)
Q Consensus 112 i~~qi~~~l~ylH~~~iiiHrDlKp~NIll~~~~~~kl~DFGla 155 (392)
=+.+|.+-+.-+|..+| +-+|+|+.|.. .-||+|||.+
T Consensus 169 ~~~~~~~dl~~~~k~gI-~~~Dv~~~ny~-----~G~lvDfs~~ 206 (207)
T PF13095_consen 169 DIPQMLRDLKILHKLGI-VPRDVKPRNYR-----GGKLVDFSSS 206 (207)
T ss_pred HHHHHHHHHHHHHHCCe-eeccCcccccc-----CCEEEecccC
Confidence 35778888899999999 99999999988 4589999864
No 470
>KOG1035|consensus
Probab=95.66 E-value=0.0026 Score=67.97 Aligned_cols=30 Identities=13% Similarity=0.540 Sum_probs=27.4
Q ss_pred cccccccceeeeccccceeeeeeccccccc
Q psy6828 12 NSILRQSTVVKLVDNHKLFDWFCSWFQNVH 41 (392)
Q Consensus 12 ~~~~~E~~~l~~l~hpniv~~~~~~~~~~~ 41 (392)
.+|.|||++|++|+|||+|+|+.+|.|...
T Consensus 522 skI~rEVk~LArLnHpNVVRYysAWVEs~~ 551 (1351)
T KOG1035|consen 522 SKILREVKLLARLNHPNVVRYYSAWVESTA 551 (1351)
T ss_pred HHHHHHHHHHhhcCCcceeeeehhhhccCC
Confidence 468999999999999999999999998664
No 471
>COG4248 Uncharacterized protein with protein kinase and helix-hairpin-helix DNA-binding domains [General function prediction only]
Probab=95.59 E-value=0.064 Score=51.71 Aligned_cols=48 Identities=19% Similarity=0.268 Sum_probs=43.5
Q ss_pred CCCHHHHHHHHHHHHHHHHHHhcCCcccccCCCCCceEEcCCceEEEec
Q psy6828 103 KLDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLVDSRWVVKLAD 151 (392)
Q Consensus 103 ~l~~~~~~~i~~qi~~~l~ylH~~~iiiHrDlKp~NIll~~~~~~kl~D 151 (392)
...|....+..+.++.+..-||.+|. .-+|+.++|+|+.+++.+.|.|
T Consensus 113 ~~~w~fllrvaRnlA~aFA~lH~~Gh-~vGDVn~~~~lVsd~~~V~LVd 160 (637)
T COG4248 113 HCAWDFLLRVARNLASAFATLHEHGH-VVGDVNQNSFLVSDDSKVVLVD 160 (637)
T ss_pred ccccHHHHHHHHHHHHHHHHHHhcCC-cccccCccceeeecCceEEEEc
Confidence 37888999999999999999999999 8999999999998888777766
No 472
>PF01636 APH: Phosphotransferase enzyme family This family is part of the larger protein kinase superfamily.; InterPro: IPR002575 This entry consists of bacterial antibiotic resistance proteins, which confer resistance to various aminoglycosides they include:- aminoglycoside 3'-phosphotransferase or kanamycin kinase / neomycin-kanamycin phosphotransferase and streptomycin 3''-kinase or streptomycin 3''-phosphotransferase. The aminoglycoside phosphotransferases inactivate aminoglycoside antibiotics via phosphorylation []. The proteins are found in a range of taxonomic groups.; PDB: 2PPQ_A 2Q83_B 3TDV_B 3TDW_A 3I0O_A 3I0Q_A 3I1A_B 3Q2M_A 3HAV_C 2PUI_B ....
Probab=95.41 E-value=0.036 Score=49.23 Aligned_cols=29 Identities=34% Similarity=0.486 Sum_probs=20.0
Q ss_pred ccccCCCCCceEEc-CCceEEEeccccchh
Q psy6828 129 RYHGNLKASNCLVD-SRWVVKLADFGLTEF 157 (392)
Q Consensus 129 iiHrDlKp~NIll~-~~~~~kl~DFGla~~ 157 (392)
++|+|+.|.|||++ .++.+.++||+.+..
T Consensus 168 ~~HgD~~~~Nil~~~~~~~i~iID~e~a~~ 197 (239)
T PF01636_consen 168 LIHGDLHPGNILVDPSDGRIGIIDFEDAGW 197 (239)
T ss_dssp EE-SS-SGGGEEEESSTTEEEE--GTT-EE
T ss_pred EEEeccccccceeeeccceeEEEecccceE
Confidence 49999999999999 566678999987653
No 473
>KOG0578|consensus
Probab=95.24 E-value=0.0067 Score=59.80 Aligned_cols=28 Identities=11% Similarity=0.311 Sum_probs=24.7
Q ss_pred cccccccceeeeccccceeeeeeccccc
Q psy6828 12 NSILRQSTVVKLVDNHKLFDWFCSWFQN 39 (392)
Q Consensus 12 ~~~~~E~~~l~~l~hpniv~~~~~~~~~ 39 (392)
+-++.|+.+|+.++|||||+|+.++...
T Consensus 315 eLilnEi~Vm~~~~H~NiVnfl~Sylv~ 342 (550)
T KOG0578|consen 315 ELLLNEILVMRDLHHPNIVNFLDSYLVG 342 (550)
T ss_pred hhhHHHHHHHHhccchHHHHHHHHhccc
Confidence 6688999999999999999998877655
No 474
>TIGR02721 ycfN_thiK thiamine kinase. Members of this family are the ycfN gene product of Escherichia coli, now identified as the salvage enzyme thiamine kinase (thiK), and additional proteobacterial homologs taken to be orthologs with equivalent function.
Probab=95.07 E-value=0.066 Score=48.89 Aligned_cols=28 Identities=25% Similarity=0.288 Sum_probs=24.4
Q ss_pred ccccCCCCCceEEcCCceEEEeccccchh
Q psy6828 129 RYHGNLKASNCLVDSRWVVKLADFGLTEF 157 (392)
Q Consensus 129 iiHrDlKp~NIll~~~~~~kl~DFGla~~ 157 (392)
++|+|+.|.||++++++ +.++||..+..
T Consensus 148 l~H~Dl~~~Nil~~~~~-~~lIDwE~a~~ 175 (256)
T TIGR02721 148 PLHMDVHAYNLVVTPQG-LKLIDWEYASD 175 (256)
T ss_pred eecCCCCcCcEEEeCCC-CEEEeccccCc
Confidence 49999999999998877 78999987754
No 475
>PF10707 YrbL-PhoP_reg: PhoP regulatory network protein YrbL; InterPro: IPR019647 This entry represents proteins that are activated by the protein PhoP. PhoP controls the expression of a large number of genes that mediate adaptation to low Mg2+ environments and/or virulence in several bacterial species. YbrL is proposed to be acting in a loop activity with PhoP and PrmA analogous to the multi-component loop in Salmonella sp., where the PhoP-dependent PmrD protein activates the regulatory protein PmrA, and the activated PmrA then represses transcription from the PmrD promoter which harbours binding sites for both the PhoP and PmrA proteins. Expression of YrbL is induced in low Mg2+ in a PhoP-dependent fashion and repressed by Fe3+ in a PmrA-dependent manner [].
Probab=94.70 E-value=0.35 Score=42.45 Aligned_cols=38 Identities=29% Similarity=0.325 Sum_probs=28.6
Q ss_pred HHHHHhcCCcccccCCCCCceEEcCC---c-eEEEec-cccchh
Q psy6828 119 GMLYLHDSALRYHGNLKASNCLVDSR---W-VVKLAD-FGLTEF 157 (392)
Q Consensus 119 ~l~ylH~~~iiiHrDlKp~NIll~~~---~-~~kl~D-FGla~~ 157 (392)
-..||-+.+| +.+|++|.||++... . .+.|+| ||-..+
T Consensus 130 f~~~l~~~~I-v~~dl~~~NIv~~~~~~~~~~lvlIDG~G~~~~ 172 (199)
T PF10707_consen 130 FKRYLLDHHI-VIRDLNPHNIVVQRRDSGEFRLVLIDGLGEKEL 172 (199)
T ss_pred HHHHHHHcCC-eecCCCcccEEEEecCCCceEEEEEeCCCCccc
Confidence 3567788899 999999999999643 2 588888 665443
No 476
>PRK05231 homoserine kinase; Provisional
Probab=94.53 E-value=0.35 Score=45.60 Aligned_cols=30 Identities=20% Similarity=0.313 Sum_probs=25.3
Q ss_pred CCcccccCCCCCceEEcCCceEEEeccccch
Q psy6828 126 SALRYHGNLKASNCLVDSRWVVKLADFGLTE 156 (392)
Q Consensus 126 ~~iiiHrDlKp~NIll~~~~~~kl~DFGla~ 156 (392)
.++ +|+|+.|.||+++.+...-++||+.+.
T Consensus 187 ~~l-iHgD~~~~Nil~~~~~~~~iIDf~~~~ 216 (319)
T PRK05231 187 RGV-IHADLFRDNVLFEGDRLSGFIDFYFAC 216 (319)
T ss_pred ccc-CCCCCCCCcEEEECCceEEEEeccccc
Confidence 356 999999999999876656899999875
No 477
>PF05165 GGDN: GGDN family; InterPro: IPR007839 GTP cyclohydrolase III catalyses the formation of 2-amino-5-formylamino-6- ribofuranosylamino-4(3H)-pyrimidinone ribonucleotide monophosphate and inorganic phosphate from GTP. The enzyme also has an independent pyrophosphate phosphohydrolase activity. The proteins are 200-270 amino acids in length.; GO: 0003933 GTP cyclohydrolase activity, 0009058 biosynthetic process; PDB: 2QV6_B.
Probab=94.18 E-value=0.5 Score=42.36 Aligned_cols=59 Identities=25% Similarity=0.271 Sum_probs=47.5
Q ss_pred CceEEEeecccchh-hhhccCChhhHHHhHHHHHHHHHHhhhhcCeEEEeeeCceeeecc
Q psy6828 220 DSVTIYFSDIVGFT-AMSAESTPLQVVDFLNDLYTCFDSIVGNYDVYKVETIGDAYMVVS 278 (392)
Q Consensus 220 ~~vtvlf~DI~~ft-~l~~~~~p~~l~~~Ln~~~~~~~~~v~~~~g~~~~~~Gd~~~a~~ 278 (392)
..+.+..-|+.++| .++...+|-+..-...+++..+.+.+.+||+.--=.-||-+|+++
T Consensus 126 ~~v~iAH~DI~d~T~~~Td~~~~ydt~~~I~~l~~~l~~~~~~~G~L~fylGGDNi~~v~ 185 (246)
T PF05165_consen 126 GYVQIAHFDINDSTGTYTDEESPYDTYLEIEDLYAKLMKYLEKYGSLAFYLGGDNIMAVC 185 (246)
T ss_dssp --EEEEEEEETTHHHHTTTTS-HHHHHHHHHHHHHHHHHHHHTTT---EEEETTEEEEE-
T ss_pred CceEEEEEeeeccchhhhcccChHHHHHHHHHHHHHHHHHHHhcCCEEEEecCceEEEEC
Confidence 56889999999999 899899999999999999999999999999877777788888776
No 478
>KOG0606|consensus
Probab=92.99 E-value=0.045 Score=58.18 Aligned_cols=107 Identities=19% Similarity=0.164 Sum_probs=72.2
Q ss_pred cCCCCCcceeEEEEEEEeecCcEEEEEEcCCCCh---hHHHHHHHHHHH--------------------------HHhhc
Q psy6828 49 SNPDSDFRYSAIFTPIGIYKGRIFAIKRIPKKSV---DITRAMKKELKI--------------------------DIMEN 99 (392)
Q Consensus 49 ~~~lg~G~~g~V~~~~~~~~~~~vAiK~~~~~~~---~~~~~~~~E~~~--------------------------~~l~~ 99 (392)
..++-.|+++.++.+.-..+|...++|....... ...+....+-.+ .++.+
T Consensus 809 ~~p~qS~sp~ss~p~~pa~sgh~~~~~v~~~ap~i~~~~~~s~r~~s~~~i~p~~P~v~~~~~s~~~rsP~~L~~~~~~~ 888 (1205)
T KOG0606|consen 809 TKPSQSGSPSSSFPASPAGSGHTRPSKVHGLAPKIRTNDYESIRSKSNILITPRSPAVVRSFPSFPCRSPLPLVGHYLNG 888 (1205)
T ss_pred cccccCCCCcccccCCccccccccchhhhccchhhccccccccCCccCccccCCCCceecccCCCCCCCCcchhhHHhcc
Confidence 4488889999999887666675555554432211 011111111111 33322
Q ss_pred CCc--------CCCHHHHHHHHHHHHHHHHHHhcCCcccccCCCCCceEEcCCceEEEeccccch
Q psy6828 100 EDV--------KLDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLVDSRWVVKLADFGLTE 156 (392)
Q Consensus 100 ~~~--------~l~~~~~~~i~~qi~~~l~ylH~~~iiiHrDlKp~NIll~~~~~~kl~DFGla~ 156 (392)
+.. ..+.+-++.++..+..+++|||+..+ .|||++|.|++...++..++.|||+..
T Consensus 889 ~~~~Skl~~~~~~saepaRs~i~~~vqs~e~L~s~~r-~h~~~~p~~~l~~~~gh~~l~~~~t~~ 952 (1205)
T KOG0606|consen 889 GDLPSKLHNSGCLSAEPARSPILERVQSLESLHSSLR-KHRDLKPDSLLIAYDGHRPLTDFGTLS 952 (1205)
T ss_pred CCchhhhhcCCCcccccccchhHHHHhhhhccccchh-hcccccccchhhcccCCcccCcccccc
Confidence 211 35566677888899999999999888 999999999999999999999998543
No 479
>KOG0591|consensus
Probab=92.83 E-value=0.012 Score=53.44 Aligned_cols=28 Identities=7% Similarity=0.481 Sum_probs=23.4
Q ss_pred cccccccceeeeccccceeeeee-ccccc
Q psy6828 12 NSILRQSTVVKLVDNHKLFDWFC-SWFQN 39 (392)
Q Consensus 12 ~~~~~E~~~l~~l~hpniv~~~~-~~~~~ 39 (392)
..+..|+.+|++|+|||||+|+. .+.++
T Consensus 63 q~~v~Ei~lLkQL~HpNIVqYy~~~f~~~ 91 (375)
T KOG0591|consen 63 QDCVKEISLLKQLNHPNIVQYYAHSFIED 91 (375)
T ss_pred HHHHHHHHHHHhcCCchHHHHHHHhhhcc
Confidence 45678999999999999999988 55554
No 480
>KOG0575|consensus
Probab=92.82 E-value=0.051 Score=54.21 Aligned_cols=29 Identities=3% Similarity=0.241 Sum_probs=27.1
Q ss_pred cccccccceeeeccccceeeeeecccccc
Q psy6828 12 NSILRQSTVVKLVDNHKLFDWFCSWFQNV 40 (392)
Q Consensus 12 ~~~~~E~~~l~~l~hpniv~~~~~~~~~~ 40 (392)
+++.+|++++++|+|||||++++.|.+..
T Consensus 63 eKv~~EIeIHr~L~HpnIV~f~~~FEDs~ 91 (592)
T KOG0575|consen 63 EKVLNEIEIHRSLKHPNIVQFYHFFEDSN 91 (592)
T ss_pred HHHHHHHHHHHhcCCCcEEeeeeEeecCC
Confidence 78899999999999999999999998884
No 481
>PF12260 PIP49_C: Protein-kinase domain of FAM69; InterPro: IPR022049 Family with sequence similarity 69 has three members (A, B and C). Proteins in this uncharacterised family are described as transmembrane proteins.
Probab=92.53 E-value=0.21 Score=43.37 Aligned_cols=56 Identities=16% Similarity=0.082 Sum_probs=47.6
Q ss_pred CCCHHHHHHHHHHHHHHHHHHhcC--CcccccCCCCCceEEcCCceEEEeccccchhc
Q psy6828 103 KLDNMFIASLVADILRGMLYLHDS--ALRYHGNLKASNCLVDSRWVVKLADFGLTEFK 158 (392)
Q Consensus 103 ~l~~~~~~~i~~qi~~~l~ylH~~--~iiiHrDlKp~NIll~~~~~~kl~DFGla~~~ 158 (392)
.-+|....+++.+++..+.+++.. +.+.-.|++|+|+-+++++++|++|.......
T Consensus 55 ~~~w~~R~~iA~~lL~~l~~l~~~~~~~~~lcDv~~~nfgv~~~~~lk~iDld~v~~~ 112 (188)
T PF12260_consen 55 QSPWEQRAKIALQLLELLEELDHGPLGFFYLCDVSPDNFGVNDDGRLKLIDLDDVFVE 112 (188)
T ss_pred ccCHHHHHHHHHHHHHHHHHHhcCCCCcEEEeecchHHeEEeCCCcEEEEechhcchh
Confidence 478999999999999999999962 22367999999999999999999998765543
No 482
>KOG0193|consensus
Probab=92.27 E-value=0.11 Score=52.16 Aligned_cols=29 Identities=10% Similarity=0.234 Sum_probs=23.3
Q ss_pred ccccccccceeeeccccceeeeeeccccc
Q psy6828 11 LNSILRQSTVVKLVDNHKLFDWFCSWFQN 39 (392)
Q Consensus 11 ~~~~~~E~~~l~~l~hpniv~~~~~~~~~ 39 (392)
++.|..||..|++=.|-||+-+-.++.+.
T Consensus 432 lqaFKnEVa~lkkTRH~NIlLFMG~~~~p 460 (678)
T KOG0193|consen 432 LQAFKNEVAVLKKTRHENILLFMGACMNP 460 (678)
T ss_pred HHHHHHHHHHHhhcchhhheeeehhhcCC
Confidence 57899999999999999998665544444
No 483
>PRK09550 mtnK methylthioribose kinase; Reviewed
Probab=92.24 E-value=1.3 Score=43.30 Aligned_cols=29 Identities=28% Similarity=0.391 Sum_probs=24.2
Q ss_pred CCcccccCCCCCceEEcCCceEEEeccccch
Q psy6828 126 SALRYHGNLKASNCLVDSRWVVKLADFGLTE 156 (392)
Q Consensus 126 ~~iiiHrDlKp~NIll~~~~~~kl~DFGla~ 156 (392)
..+ +|+|+.|.|||++.+ .++++||-++.
T Consensus 223 ~~l-~HgDl~~gni~~~~~-~~~viD~E~a~ 251 (401)
T PRK09550 223 EAL-LHGDLHTGSIFVTEE-ETKVIDPEFAF 251 (401)
T ss_pred Cce-eeccCCcccEEeeCC-CcEEEeccccc
Confidence 345 999999999999776 58999997664
No 484
>TIGR00938 thrB_alt homoserine kinase, Neisseria type. Homoserine kinase is required in the biosynthesis of threonine from aspartate.The member of this family from Pseudomonas aeruginosa was shown by direct assay and complementation to act specifically as a homoserine kinase.
Probab=92.11 E-value=0.25 Score=46.49 Aligned_cols=30 Identities=27% Similarity=0.334 Sum_probs=26.2
Q ss_pred CCcccccCCCCCceEEcCCceEEEeccccch
Q psy6828 126 SALRYHGNLKASNCLVDSRWVVKLADFGLTE 156 (392)
Q Consensus 126 ~~iiiHrDlKp~NIll~~~~~~kl~DFGla~ 156 (392)
.++ +|+|+.+.|++++.++...++||+.+.
T Consensus 187 ~~l-~HgD~~~~Nvl~~~~~~~~vIDfd~~~ 216 (307)
T TIGR00938 187 RGV-IHADLFPDNVLFDGDSVKGVIDFYFAC 216 (307)
T ss_pred Ccc-CCCCCCcCcEEEECCceEEEeeccccc
Confidence 456 999999999999988877899999764
No 485
>KOG0582|consensus
Probab=92.04 E-value=0.048 Score=52.62 Aligned_cols=29 Identities=17% Similarity=0.583 Sum_probs=26.7
Q ss_pred ccccccccceeeeccccceeeeeeccccc
Q psy6828 11 LNSILRQSTVVKLVDNHKLFDWFCSWFQN 39 (392)
Q Consensus 11 ~~~~~~E~~~l~~l~hpniv~~~~~~~~~ 39 (392)
++.+.+|++.++.++||||+.|+++|.-+
T Consensus 68 ld~l~kE~~~msl~~HPNIv~~~~sFvv~ 96 (516)
T KOG0582|consen 68 LDALRKEVQTMSLIDHPNIVTYHCSFVVD 96 (516)
T ss_pred HHHHHHHHHHhhhcCCCCcceEEEEEEec
Confidence 57899999999999999999999988766
No 486
>cd05155 APH_ChoK_like_1 Uncharacterized bacterial proteins with similarity to Aminoglycoside 3'-phosphotransferase (APH) and Choline kinase (ChoK) family members. The APH/ChoK subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). This family is composed of APH, ChoK, ethanolamine kinase (ETNK), macrolide 2'-phosphotransferase (MPH2'), an unusual homoserine kinase, and uncharacterized proteins with similarity to the N-terminal domain of acyl-CoA dehydrogenase 10 (ACAD10). The members of this family catalyze the transfer of the gamma-phosphoryl group from ATP (or CTP) to small molecule substrates, such as aminoglycosides, macrolides, choline, ethanolamine, and homoserine. Phosphorylation of the antibiotics, aminoglycosides, and macrolides leads to their inactivation and to bacterial antibiotic resista
Probab=91.62 E-value=0.2 Score=45.10 Aligned_cols=29 Identities=31% Similarity=0.544 Sum_probs=24.5
Q ss_pred ccccCCCCCceEEcCCceEEEeccccchh
Q psy6828 129 RYHGNLKASNCLVDSRWVVKLADFGLTEF 157 (392)
Q Consensus 129 iiHrDlKp~NIll~~~~~~kl~DFGla~~ 157 (392)
++|+|+.|.|++++.++..-++||+.+..
T Consensus 166 l~HGD~~~~Nvlv~~~~i~giIDw~~a~~ 194 (235)
T cd05155 166 WFHGDLAPGNLLVQDGRLSAVIDFGCLGV 194 (235)
T ss_pred EEeCCCCCCcEEEECCCEEEEEeCcccCc
Confidence 39999999999998766567999998654
No 487
>cd05157 ETNK_euk Ethanolamine kinase (ETNK) in eukaryotes. ETNK is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). ETNK catalyzes the transfer of the gamma-phosphoryl group from CTP to ethanolamine (Etn), the first step in the CDP-Etn pathway for the formation of the major phospholipid, phosphatidylethanolamine (PtdEtn). Unlike ChoK, ETNK shows specific activity for its substrate, and displays negligible activity towards N-methylated derivatives of Etn. The Drosophila ETNK is implicated in development and neuronal function. Mammals contain two ETNK proteins, ETNK1 and ETNK2. ETNK1 selectively increases Etn uptake and phosphorylation, as well as PtdEtn synthesis. ETNK2 is found primarily in the liver and reproductive tissues. It plays a critical role in regulating placental hemostasis to support late embryo
Probab=91.58 E-value=0.28 Score=43.99 Aligned_cols=29 Identities=21% Similarity=0.402 Sum_probs=25.3
Q ss_pred ccccCCCCCceEEcC-CceEEEeccccchh
Q psy6828 129 RYHGNLKASNCLVDS-RWVVKLADFGLTEF 157 (392)
Q Consensus 129 iiHrDlKp~NIll~~-~~~~kl~DFGla~~ 157 (392)
++|+|+.|.|||++. ++.+.++||-.|..
T Consensus 172 l~H~Dl~~~Nil~~~~~~~~~lIDwe~a~~ 201 (235)
T cd05157 172 FCHNDLLSGNIIYNEEKNSVKFIDYEYAGY 201 (235)
T ss_pred EEcCCCCcCcEEEeCCCCCEEEEEcccCCc
Confidence 399999999999997 57899999987753
No 488
>TIGR02906 spore_CotS spore coat protein, CotS family. Members of this family include the spore coat proteins CotS and YtaA from Bacillus subtilis and, from other endospore-forming bacteria, homologs that are more closely related to these two than to the spore coat proteins YutH and YsxE. The CotS family is more broadly distributed than YutH or YsxE, but still is not universal among spore-formers.
Probab=91.38 E-value=0.36 Score=45.29 Aligned_cols=29 Identities=21% Similarity=0.274 Sum_probs=24.5
Q ss_pred CCcccccCCCCCceEEcCCceEEEeccccch
Q psy6828 126 SALRYHGNLKASNCLVDSRWVVKLADFGLTE 156 (392)
Q Consensus 126 ~~iiiHrDlKp~NIll~~~~~~kl~DFGla~ 156 (392)
.++ +|+|+.+.|++++. +.+.++||+.+.
T Consensus 187 ~~l-iHgD~~~~Nil~~~-~~i~lIDfd~~~ 215 (313)
T TIGR02906 187 RGF-CHQDYAYHNILLKD-NEVYVIDFDYCT 215 (313)
T ss_pred Cce-EcCCCCcccEEEeC-CcEEEEECcccc
Confidence 355 99999999999987 678899998654
No 489
>PHA03111 Ser/Thr kinase; Provisional
Probab=91.30 E-value=0.25 Score=46.43 Aligned_cols=36 Identities=19% Similarity=0.145 Sum_probs=23.9
Q ss_pred HHHHHHHHHHHHHHHhc---CCcccccCCCCCceEEcCC
Q psy6828 109 IASLVADILRGMLYLHD---SALRYHGNLKASNCLVDSR 144 (392)
Q Consensus 109 ~~~i~~qi~~~l~ylH~---~~iiiHrDlKp~NIll~~~ 144 (392)
++.++.||+.-...+-+ +...+|-||||.|||+-+.
T Consensus 281 ikfifLQiaLLyikIYelp~c~nF~H~DLKPdNILiFds 319 (444)
T PHA03111 281 IKFIFLQIALLYIKIYELPCCDNFLHVDLKPDNILIFDS 319 (444)
T ss_pred HHHHHHHHHHHHHhhhcCCCcceeeeccCCCCcEEEecC
Confidence 46778888654333322 2234999999999999443
No 490
>PRK10271 thiK thiamine kinase; Provisional
Probab=91.25 E-value=0.16 Score=43.90 Aligned_cols=28 Identities=18% Similarity=0.228 Sum_probs=24.5
Q ss_pred ccccCCCCCceEEcCCceEEEeccccchh
Q psy6828 129 RYHGNLKASNCLVDSRWVVKLADFGLTEF 157 (392)
Q Consensus 129 iiHrDlKp~NIll~~~~~~kl~DFGla~~ 157 (392)
.+|.|+.|.|+++++++ ++++||+.+..
T Consensus 79 p~H~D~~~~N~~~~~~~-~~lIDwe~a~~ 106 (188)
T PRK10271 79 PLHMDVHAGNLVHSASG-LRLIDWEYAGD 106 (188)
T ss_pred eecCCCCCccEEEECCC-EEEEeCCcccC
Confidence 38999999999998877 89999998753
No 491
>PF05445 Pox_ser-thr_kin: Poxvirus serine/threonine protein kinase; InterPro: IPR008790 This family of proteins contain poxvirus serine/threonine protein kinases, which are essential for phosphorylation of virion proteins during virion assembly. ; GO: 0004672 protein kinase activity, 0005524 ATP binding
Probab=91.13 E-value=0.23 Score=46.88 Aligned_cols=33 Identities=24% Similarity=0.338 Sum_probs=21.8
Q ss_pred HHHHHHHHHHHHHHHh-----cCCcccccCCCCCceEEcC
Q psy6828 109 IASLVADILRGMLYLH-----DSALRYHGNLKASNCLVDS 143 (392)
Q Consensus 109 ~~~i~~qi~~~l~ylH-----~~~iiiHrDlKp~NIll~~ 143 (392)
++.++.||+ |.|+- .+...+|-||||.|||+-+
T Consensus 277 vkfifLQia--LLyikIYelp~c~nF~H~DLKPdNILiFd 314 (434)
T PF05445_consen 277 VKFIFLQIA--LLYIKIYELPCCTNFLHVDLKPDNILIFD 314 (434)
T ss_pred HHHHHHHHH--HHHeeeecCCCcceeeecccCcCcEEEec
Confidence 355667764 44522 2333499999999999943
No 492
>cd05156 ChoK_euk Choline Kinase (ChoK) in eukaryotes. The ChoK subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). It is composed of bacterial and eukaryotic choline kinases, as well as eukaryotic ethanolamine kinase. ChoK catalyzes the transfer of the gamma-phosphoryl group from ATP (or CTP) to its substrate, choline, producing phosphorylcholine (PCho), a precursor to the biosynthesis of two major membrane phospholipids, phosphatidylcholine (PC) and sphingomyelin (SM). Although choline is the preferred substrate, ChoK also shows substantial activity towards ethanolamine and its N-methylated derivatives. ChoK plays an important role in cell signaling pathways and the regulation of cell growth. Along with PCho, it is involved in malignant transformation through Ras oncogenes in various human cancer
Probab=91.12 E-value=0.39 Score=44.90 Aligned_cols=29 Identities=24% Similarity=0.349 Sum_probs=25.7
Q ss_pred ccccCCCCCceEEcCC----ceEEEeccccchh
Q psy6828 129 RYHGNLKASNCLVDSR----WVVKLADFGLTEF 157 (392)
Q Consensus 129 iiHrDlKp~NIll~~~----~~~kl~DFGla~~ 157 (392)
++|.|+.|.|||++++ +.++++||..|..
T Consensus 181 lcH~Dl~~~Nil~~~~~~~~~~i~lIDwEya~~ 213 (302)
T cd05156 181 FCHNDLQEGNILLLNPSSETKKLVLIDFEYASY 213 (302)
T ss_pred EEecCCCcCeEEecCCCCCCCcEEEEeeCCCCC
Confidence 4899999999999875 8899999998764
No 493
>cd05153 HomoserineK_II Homoserine Kinase, type II. Homoserine kinase is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). This subfamily is composed of unusual homoserine kinases, from a subset of bacteria, which have a PK fold. These proteins do not bear any similarity to the GHMP family homoserine kinases present in most bacteria and eukaryotes. Homoserine kinase catalyzes the transfer of the gamma-phosphoryl group from ATP to L-homoserine producing L-homoserine phosphate, an intermediate in the production of the amino acids threonine, methionine, and isoleucine.
Probab=90.62 E-value=0.4 Score=44.67 Aligned_cols=30 Identities=23% Similarity=0.280 Sum_probs=25.9
Q ss_pred CcccccCCCCCceEEcCCceEEEeccccchh
Q psy6828 127 ALRYHGNLKASNCLVDSRWVVKLADFGLTEF 157 (392)
Q Consensus 127 ~iiiHrDlKp~NIll~~~~~~kl~DFGla~~ 157 (392)
++ +|+|+.|.|+++++++...|+||..+..
T Consensus 176 ~l-~HgD~~~~Nil~~~~~~~~iIDfe~a~~ 205 (296)
T cd05153 176 GV-IHADLFRDNVLFDGDELSGVIDFYFACT 205 (296)
T ss_pred cC-CccCcCcccEEEeCCceEEEeehhhhcC
Confidence 45 9999999999999887788999987653
No 494
>COG5072 ALK1 Serine/threonine kinase of the haspin family [Cell division and chromosome partitioning]
Probab=90.46 E-value=0.5 Score=45.12 Aligned_cols=54 Identities=24% Similarity=0.149 Sum_probs=41.2
Q ss_pred CCHHHHHHHHHHHHHHHHHHhcCCcccccCCCCCceEEcCCceEEEeccccchhc
Q psy6828 104 LDNMFIASLVADILRGMLYLHDSALRYHGNLKASNCLVDSRWVVKLADFGLTEFK 158 (392)
Q Consensus 104 l~~~~~~~i~~qi~~~l~ylH~~~iiiHrDlKp~NIll~~~~~~kl~DFGla~~~ 158 (392)
-.++++..++.+.+.-+.-+..+=..=||++.-.||||+ +|++.|+||-+++..
T Consensus 318 ~~~~e~lsff~s~~sil~~lekkf~fehrnlt~~niLId-~GnvtLIDfklsRl~ 371 (488)
T COG5072 318 DRSEEELSFFWSCISILDILEKKFPFEHRNLTLDNILID-EGNVTLIDFKLSRLS 371 (488)
T ss_pred ccHHHHHHHHHHHHHHHhhhhhcCCcccccccccceeee-cCceEEEEeeeeecc
Confidence 456778888887665444444332247999999999999 999999999999953
No 495
>PF01633 Choline_kinase: Choline/ethanolamine kinase; InterPro: IPR002573 Choline kinase, (ATP:choline phosphotransferase, 2.7.1.32 from EC) belongs to the choline/ethanolamine kinase family. Ethanolamine and choline are major membrane phospholipids, in the form of glycerophosphoethanolamine and glycerophosphocholine. Ethanolamine is also a component of the glycosylphosphatidylinositol (GPI) anchor, which is necessary for cell-surface protein attachment []. The de novo synthesis of these phospholipids begins with the creation of phosphoethanolamine and phosphocholine by ethanolamine and choline kinases in the first step of the CDP-ethanolamine pathway [, ]. There are two putative choline/ethanolamine kinases (C/EKs) in the Trypanosoma brucei genome. Ethanolamine kinase has no choline kinase activity [] and its activity is inhibited by ADP []. Inositol supplementation represses ethanolamine kinase, decreasing the incorporation of ethanolamine into the CDP-ethanolamine pathway and into phosphatidylethanolamine and phosphatidylcholine []. ; GO: 0016773 phosphotransferase activity, alcohol group as acceptor; PDB: 3C5I_A 2IG7_A 3LQ3_A 3FEG_A 2QG7_E 3FI8_A 1NW1_A 3MES_A 3G15_A 2CKP_B ....
Probab=90.45 E-value=0.34 Score=42.74 Aligned_cols=29 Identities=31% Similarity=0.482 Sum_probs=20.4
Q ss_pred ccccCCCCCceEE-cCCceEEEeccccchh
Q psy6828 129 RYHGNLKASNCLV-DSRWVVKLADFGLTEF 157 (392)
Q Consensus 129 iiHrDlKp~NIll-~~~~~~kl~DFGla~~ 157 (392)
+.|.|+.|.|||+ +.++.++++||-.|..
T Consensus 145 ~cHnDl~~~Nil~~~~~~~~~lIDfEya~~ 174 (211)
T PF01633_consen 145 FCHNDLNPGNILINNKDGEVKLIDFEYAGY 174 (211)
T ss_dssp EE-S--SGGGEEETSSSSCEEE--GTT-EE
T ss_pred EeeccCccccEEeccCCCeEEEecHHHHhh
Confidence 4899999999999 8889999999988764
No 496
>KOG0192|consensus
Probab=90.38 E-value=0.093 Score=50.55 Aligned_cols=30 Identities=3% Similarity=0.194 Sum_probs=26.2
Q ss_pred ccccccccceeeeccccceeeeeecccccc
Q psy6828 11 LNSILRQSTVVKLVDNHKLFDWFCSWFQNV 40 (392)
Q Consensus 11 ~~~~~~E~~~l~~l~hpniv~~~~~~~~~~ 40 (392)
.+.+.+|+.+|++|+|||||+++....+..
T Consensus 83 ~~~f~~E~~il~~l~HpNIV~f~G~~~~~~ 112 (362)
T KOG0192|consen 83 RKAFRREASLLSRLRHPNIVQFYGACTSPP 112 (362)
T ss_pred HHHHHHHHHHHHhCCCCCeeeEEEEEcCCC
Confidence 348999999999999999999988887763
No 497
>PRK10245 adrA diguanylate cyclase AdrA; Provisional
Probab=89.91 E-value=2.7 Score=40.63 Aligned_cols=58 Identities=14% Similarity=0.064 Sum_probs=45.6
Q ss_pred CceEEEeecccchhhhhccCChhhHHHhHHHHHHHHHHhhhhcCeEEEeeeCceeeecc
Q psy6828 220 DSVTIYFSDIVGFTAMSAESTPLQVVDFLNDLYTCFDSIVGNYDVYKVETIGDAYMVVS 278 (392)
Q Consensus 220 ~~vtvlf~DI~~ft~l~~~~~p~~l~~~Ln~~~~~~~~~v~~~~g~~~~~~Gd~~~a~~ 278 (392)
...++++.||.+|..+......+..-++|.++-+.+...+.. +..+-.+-||.++.+.
T Consensus 235 ~~~~ll~idId~Fk~INd~~Gh~~GD~lL~~vA~~L~~~l~~-~d~laRlggdeFavll 292 (366)
T PRK10245 235 RDATLLIIDIDHFKSINDTWGHDVGDEAIVALTRQLQITLRG-SDVIGRFGGDEFAVIM 292 (366)
T ss_pred CCEEEEEEECCcchHHHHhhCchHHHHHHHHHHHHHHHhCCC-CCEEEEEcCcEEEEEe
Confidence 457899999999999999888777788888887777777754 3466778888886554
No 498
>cd05150 APH Aminoglycoside 3'-phosphotransferase (APH). The APH subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). APH catalyzes the transfer of the gamma-phosphoryl group from ATP to aminoglycoside antibiotics such as kanamycin, streptomycin, neomycin, and gentamicin, among others. The aminoglycoside antibiotics target the 30S ribosome and promote miscoding, leading to the production of defective proteins which insert into the bacterial membrane, resulting in membrane damage and the ultimate demise of the bacterium. Phosphorylation of the aminoglycoside antibiotics results in their inactivation, leading to bacterial antibiotic resistance. The APH gene is found on transposons and plasmids and is thought to have originated as a self-defense mechanism used by microorganisms that produce the antibio
Probab=89.86 E-value=0.25 Score=44.61 Aligned_cols=29 Identities=24% Similarity=0.276 Sum_probs=25.5
Q ss_pred ccccCCCCCceEEcCCceEEEeccccchh
Q psy6828 129 RYHGNLKASNCLVDSRWVVKLADFGLTEF 157 (392)
Q Consensus 129 iiHrDlKp~NIll~~~~~~kl~DFGla~~ 157 (392)
.+|+|+.|.|||+++++...|+||+.+..
T Consensus 165 l~HgD~~~~Nil~~~~~~~~iIDwe~a~~ 193 (244)
T cd05150 165 VTHGDACLPNIIVDPGKFSGFIDLGRLGV 193 (244)
T ss_pred EECCCCCCccEEEeCCcEEEEEEcccccc
Confidence 49999999999999987788999997753
No 499
>COG0510 ycfN Thiamine kinase and related kinases [Coenzyme transport and metabolism]
Probab=89.58 E-value=0.61 Score=43.02 Aligned_cols=49 Identities=14% Similarity=0.256 Sum_probs=35.6
Q ss_pred HHHHHHHHHHHHHHHhcC-CcccccCCCCCceEEcCCceEEEeccccchh
Q psy6828 109 IASLVADILRGMLYLHDS-ALRYHGNLKASNCLVDSRWVVKLADFGLTEF 157 (392)
Q Consensus 109 ~~~i~~qi~~~l~ylH~~-~iiiHrDlKp~NIll~~~~~~kl~DFGla~~ 157 (392)
....+..+-..+.-.+.. .+++|.|+.|.|++.++.+.++|+||--|..
T Consensus 134 ~~~~~~~l~~~l~~~~~~~~v~cH~Dl~~~N~l~t~~~~l~LIDWEyAg~ 183 (269)
T COG0510 134 LRKKLKELRRALEEVPKDDLVPCHNDLNPGNLLLTDKGGLFLIDWEYAGL 183 (269)
T ss_pred HHHHHHHHHHHhhhcCCCceeeecCCCCccceEEcCCCcEEEEecccCCC
Confidence 344455555555555544 2349999999999999999999999976653
No 500
>KOG0615|consensus
Probab=89.39 E-value=0.11 Score=49.67 Aligned_cols=28 Identities=4% Similarity=0.007 Sum_probs=23.1
Q ss_pred cccccccceeeeccccceeeeeeccccc
Q psy6828 12 NSILRQSTVVKLVDNHKLFDWFCSWFQN 39 (392)
Q Consensus 12 ~~~~~E~~~l~~l~hpniv~~~~~~~~~ 39 (392)
..+.+|+.+|++|+|||||+...-+.+.
T Consensus 221 ~~v~~EieILkkL~HP~IV~~~d~f~~~ 248 (475)
T KOG0615|consen 221 RDVQNEIEILKKLSHPNIVRIKDFFEVP 248 (475)
T ss_pred hhhHHHHHHHHhcCCCCEEEEeeeeecC
Confidence 3478999999999999999997655554
Done!