Query psy683
Match_columns 137
No_of_seqs 138 out of 518
Neff 7.8
Searched_HMMs 29240
Date Fri Aug 16 19:32:52 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy683.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/683hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2pyg_A Poly(beta-D-mannuronate 99.3 4.1E-11 1.4E-15 94.6 13.9 121 13-133 165-293 (377)
2 1ru4_A Pectate lyase, PEL9A; p 99.3 9.5E-11 3.2E-15 94.3 14.3 126 7-133 116-268 (400)
3 2pyg_A Poly(beta-D-mannuronate 99.2 3.3E-10 1.1E-14 89.4 14.1 125 8-133 136-270 (377)
4 1ru4_A Pectate lyase, PEL9A; p 99.2 4.5E-10 1.6E-14 90.3 13.1 128 6-133 137-292 (400)
5 2inu_A Insulin fructotransfera 99.0 9.7E-10 3.3E-14 88.1 9.8 123 8-133 173-299 (410)
6 2inu_A Insulin fructotransfera 99.0 5.7E-09 2E-13 83.7 11.5 125 7-133 194-337 (410)
7 1dbg_A Chondroitinase B; beta 98.6 1.4E-06 4.7E-11 72.0 14.5 108 8-118 230-358 (506)
8 1dbg_A Chondroitinase B; beta 98.6 2.4E-06 8.2E-11 70.5 15.3 126 7-134 197-351 (506)
9 1rmg_A Rgase A, rhamnogalactur 98.1 6.1E-05 2.1E-09 60.7 13.4 117 8-129 138-265 (422)
10 1bhe_A PEHA, polygalacturonase 98.1 0.00011 3.6E-09 58.3 14.2 108 8-119 162-283 (376)
11 1ia5_A Polygalacturonase; glyc 98.1 0.00012 4.2E-09 57.3 13.7 108 8-119 115-238 (339)
12 2iq7_A Endopolygalacturonase; 98.1 0.00014 4.7E-09 57.0 13.8 108 8-119 111-234 (339)
13 1hg8_A Endopolygalacturonase; 97.9 0.00018 6.3E-09 56.5 12.7 109 7-119 114-246 (349)
14 1nhc_A Polygalacturonase I; be 97.9 0.00025 8.5E-09 55.5 12.1 107 8-119 111-233 (336)
15 3gq8_A Preneck appendage prote 97.8 0.00015 5.3E-09 60.8 11.0 97 23-120 137-255 (609)
16 1czf_A Polygalacturonase II; b 97.8 0.00057 1.9E-08 54.0 13.6 107 8-119 137-259 (362)
17 2iq7_A Endopolygalacturonase; 97.8 0.00025 8.6E-09 55.5 10.5 109 22-133 102-226 (339)
18 1rmg_A Rgase A, rhamnogalactur 97.7 0.00039 1.3E-08 56.0 11.8 108 22-133 129-246 (422)
19 1bhe_A PEHA, polygalacturonase 97.7 0.00047 1.6E-08 54.5 12.1 111 21-134 152-276 (376)
20 1ia5_A Polygalacturonase; glyc 97.7 0.00028 9.4E-09 55.3 10.5 109 22-133 106-230 (339)
21 2uvf_A Exopolygalacturonase; G 97.7 0.00037 1.3E-08 58.6 11.6 108 8-119 342-469 (608)
22 1hg8_A Endopolygalacturonase; 97.7 0.00037 1.3E-08 54.8 10.7 109 22-133 104-238 (349)
23 3gqn_A Preneck appendage prote 97.7 0.00035 1.2E-08 60.0 10.9 97 23-120 137-255 (772)
24 3jur_A EXO-poly-alpha-D-galact 97.6 0.0007 2.4E-08 55.0 11.7 109 9-119 202-330 (448)
25 3gq8_A Preneck appendage prote 97.5 0.0013 4.5E-08 55.3 11.8 102 8-110 145-274 (609)
26 1nhc_A Polygalacturonase I; be 97.5 0.0009 3.1E-08 52.3 10.1 108 22-133 102-225 (336)
27 1k5c_A Endopolygalacturonase; 97.4 0.0031 1.1E-07 49.3 12.8 107 8-119 107-229 (335)
28 3jur_A EXO-poly-alpha-D-galact 97.4 0.0017 5.7E-08 52.8 10.8 112 21-133 191-322 (448)
29 1czf_A Polygalacturonase II; b 97.3 0.0038 1.3E-07 49.3 11.7 107 22-132 128-250 (362)
30 3gqn_A Preneck appendage prote 97.3 0.002 6.9E-08 55.3 10.7 91 8-99 145-257 (772)
31 2uvf_A Exopolygalacturonase; G 97.2 0.0066 2.3E-07 51.0 12.9 111 21-133 332-461 (608)
32 1gq8_A Pectinesterase; hydrola 97.2 0.032 1.1E-06 43.3 15.8 77 28-110 93-175 (319)
33 1xg2_A Pectinesterase 1; prote 97.0 0.059 2E-06 41.8 15.7 78 27-110 88-171 (317)
34 1gq8_A Pectinesterase; hydrola 97.0 0.029 9.8E-07 43.6 13.5 98 9-112 97-211 (319)
35 1k5c_A Endopolygalacturonase; 96.9 0.02 6.8E-07 44.7 12.5 105 23-132 100-220 (335)
36 1xg2_A Pectinesterase 1; prote 96.9 0.031 1.1E-06 43.4 13.5 98 9-112 93-207 (317)
37 1idk_A Pectin lyase A; signal, 96.9 0.0092 3.2E-07 47.1 10.4 65 22-86 125-198 (359)
38 1qcx_A Pectin lyase B; beta-he 96.6 0.015 5.3E-07 45.8 9.6 67 21-87 124-199 (359)
39 1pxz_A Major pollen allergen J 96.5 0.051 1.7E-06 42.6 12.2 112 19-133 149-271 (346)
40 1idk_A Pectin lyase A; signal, 96.5 0.011 3.9E-07 46.6 8.2 34 77-110 246-279 (359)
41 3zsc_A Pectate trisaccharide-l 96.5 0.09 3.1E-06 41.2 13.1 36 77-112 206-251 (340)
42 1qcx_A Pectin lyase B; beta-he 96.4 0.033 1.1E-06 43.9 10.5 112 21-132 154-278 (359)
43 3uw0_A Pectinesterase; right-h 96.3 0.17 6E-06 39.9 14.1 106 23-133 117-255 (364)
44 1pxz_A Major pollen allergen J 96.1 0.017 5.9E-07 45.3 7.4 100 9-111 162-272 (346)
45 3zsc_A Pectate trisaccharide-l 96.1 0.3 1E-05 38.2 14.5 68 21-88 83-162 (340)
46 3eqn_A Glucan 1,3-beta-glucosi 96.0 0.16 5.4E-06 43.7 13.0 104 9-117 185-303 (758)
47 2qy1_A Pectate lyase II; GAG l 95.7 0.051 1.8E-06 42.3 8.3 101 8-111 129-250 (330)
48 2nsp_A Pectinesterase A; micha 95.5 0.42 1.4E-05 37.3 13.0 55 6-65 140-194 (342)
49 3uw0_A Pectinesterase; right-h 95.4 0.57 1.9E-05 36.9 13.4 109 5-118 165-306 (364)
50 2nsp_A Pectinesterase A; micha 95.4 0.3 1E-05 38.2 11.7 106 22-133 90-230 (342)
51 1ogo_X Dextranase; hydrolase, 95.1 0.18 6.2E-06 42.1 10.1 100 8-111 335-444 (574)
52 1dab_A P.69 pertactin; pertuss 95.0 0.17 5.8E-06 42.0 9.6 77 8-86 116-226 (539)
53 1ogo_X Dextranase; hydrolase, 94.8 0.12 4.1E-06 43.2 8.3 103 27-133 331-443 (574)
54 3eqn_A Glucan 1,3-beta-glucosi 94.5 1.1 3.7E-05 38.6 13.6 97 21-121 174-275 (758)
55 3vmv_A Pectate lyase; polysacc 94.5 0.29 1E-05 38.1 9.3 34 77-110 216-249 (326)
56 1x0c_A Isopullulanase; glycosi 94.4 0.29 9.9E-06 40.6 9.6 102 28-133 292-405 (549)
57 2qy1_A Pectate lyase II; GAG l 94.3 1 3.5E-05 34.9 12.1 112 21-133 86-249 (330)
58 1pcl_A Pectate lyase E; lyase 94.0 0.96 3.3E-05 35.5 11.5 68 22-89 97-197 (355)
59 3vmv_A Pectate lyase; polysacc 93.5 1.7 5.9E-05 33.7 12.0 112 21-133 95-249 (326)
60 1dab_A P.69 pertactin; pertuss 93.5 1.6 5.6E-05 36.1 12.4 97 22-119 185-314 (539)
61 1air_A Pectate lyase C, PELC; 93.5 0.77 2.6E-05 36.0 10.1 36 76-111 226-261 (353)
62 3grh_A YBHC, acyl-COA thioeste 92.0 4 0.00014 32.8 15.4 113 7-123 234-378 (422)
63 1x0c_A Isopullulanase; glycosi 91.9 0.94 3.2E-05 37.5 9.0 100 8-111 295-406 (549)
64 1air_A Pectate lyase C, PELC; 91.1 4.6 0.00016 31.6 14.2 113 21-133 103-260 (353)
65 1h80_A IOTA-carrageenase; hydr 89.8 3 0.0001 33.8 10.0 96 21-122 168-282 (464)
66 2o04_A Pectate lyase, PL; hexa 88.9 2.2 7.5E-05 34.0 8.4 101 8-110 194-328 (399)
67 1vbl_A Pectate lyase 47; PL 47 88.5 4.2 0.00014 32.5 9.9 68 21-88 148-252 (416)
68 1pe9_A Pectate lyase A; parall 87.6 4.3 0.00015 31.8 9.3 68 21-88 103-207 (361)
69 3grh_A YBHC, acyl-COA thioeste 86.7 11 0.00038 30.2 13.2 106 23-132 226-361 (422)
70 1pcl_A Pectate lyase E; lyase 83.3 14 0.00049 28.7 12.6 21 21-41 134-154 (355)
71 2xt2_A ALBG, MCBG-like protein 79.6 5.4 0.00018 27.6 6.2 98 8-114 9-114 (200)
72 2o04_A Pectate lyase, PL; hexa 76.6 26 0.0009 27.7 12.1 112 20-133 183-328 (399)
73 1vbl_A Pectate lyase 47; PL 47 74.0 32 0.0011 27.4 13.6 21 21-41 190-210 (416)
74 2x6w_A Tail spike protein; vir 72.9 4.3 0.00015 34.1 4.7 58 10-75 187-254 (600)
75 1pe9_A Pectate lyase A; parall 64.6 48 0.0017 25.8 11.8 22 20-41 143-165 (361)
76 1h80_A IOTA-carrageenase; hydr 51.1 95 0.0032 25.0 10.2 72 45-120 169-254 (464)
77 1l0s_A Thermal hysteresis prot 42.8 56 0.0019 20.0 4.8 14 119-132 76-89 (90)
78 2x3h_A K5 lyase, K5A lyase; ba 39.5 1.4E+02 0.0046 23.4 8.8 87 45-131 159-258 (542)
79 2x6w_A Tail spike protein; vir 39.1 31 0.0011 29.0 4.1 76 33-119 187-274 (600)
80 2yuh_A Tubulin-specific chaper 33.6 59 0.002 22.6 4.4 26 81-106 87-112 (179)
81 2w7z_A EFSQNR, pentapeptide re 30.0 1.3E+02 0.0044 20.7 5.8 10 79-88 112-121 (214)
No 1
>2pyg_A Poly(beta-D-mannuronate) C5 epimerase 4; beta-helix, isomerase; 2.10A {Azotobacter vinelandii} PDB: 2pyh_A*
Probab=99.31 E-value=4.1e-11 Score=94.63 Aligned_cols=121 Identities=17% Similarity=0.188 Sum_probs=72.5
Q ss_pred eEEEcCccCCEEEecCCCcEEeccEEEcCCCCcEEEEe-CceeEEEeeEEEeCCcCcEEE-------ccCCccEEEeeEE
Q psy683 13 MVHCGNALAGIQIRTSSDPIVRHNKIHHGQHGGVYVHE-KGVGLIEENEVYANTLAGVWI-------TTGSAPVLRRNRI 84 (137)
Q Consensus 13 c~I~~~~~~GI~v~~~a~~~i~~n~I~~~~~~GI~v~~-~~~~~i~~n~I~~n~~~Gv~v-------~~~a~~~i~~n~I 84 (137)
|.+..+...||++..+...++++|++.+....||.+.. +...+|++|.++++...++.+ ....+.++++|.+
T Consensus 165 ~~~~~~~~dGI~~~~s~~~~i~~N~~~~~~~~GI~~~~~s~~v~I~nN~i~~~~~g~~~~~~g~~~~~~s~nv~i~~N~~ 244 (377)
T 2pyg_A 165 SVAHDNGLDGFVADYLVDSVFENNVAYANDRHGFNVVTSTHDFVMTNNVAYGNGSSGLVVQRGLEDLALPSNILIDGGAY 244 (377)
T ss_dssp CEEESCSSCSEEEESEEEEEEESCEEESCSSCSEEEETTCEEEEEESCEEESCSSCSEEEECCSSCCCCCEEEEEESCEE
T ss_pred EEeecCCCCceeEeccCCcEEECcEEEccccCcEEEEeccCCeEEECCEEECccCceEEEeccccCCCCCccEEEECCEE
Confidence 33333344444444334445555655555556666655 444566666666654433332 3344556666766
Q ss_pred EcCCcccEEEEeCCeeEEEccEEEccccCcEEEecCCCeEEeceEEecC
Q psy683 85 HSGKQVGVYFYDNGHGKLEDNDIFNHLYSGVQISNETTATLDACGLRRS 133 (137)
Q Consensus 85 ~~~~~~GI~v~~~~~g~ie~n~I~~n~~~Gi~v~~~a~p~l~~n~I~~~ 133 (137)
+.+...||.+......++++|+|.++...||++....+.++++|+|.++
T Consensus 245 ~~n~~~Gi~~~~~~~v~i~~N~i~~~~~~GI~i~g~~~~~i~~N~i~~n 293 (377)
T 2pyg_A 245 YDNAREGVLLKMTSDITLQNADIHGNGSSGVRVYGAQDVQILDNQIHDN 293 (377)
T ss_dssp ESCSSCSEEEEEEEEEEEESCEEESCSSCSEEEEEEEEEEEESCEEESC
T ss_pred EcCccCceEeccccCeEEECCEEECCCCceEEEecCCCcEEECcEEECC
Confidence 6666667777666666777777777766777777766777777777654
No 2
>1ru4_A Pectate lyase, PEL9A; parallel beta-helix; 1.60A {Erwinia chrysanthemi} SCOP: b.80.1.9
Probab=99.28 E-value=9.5e-11 Score=94.27 Aligned_cols=126 Identities=13% Similarity=0.144 Sum_probs=83.4
Q ss_pred eEEEEeeEEEcCccCCEEEecCCCcEEeccEEEcCCCCcEEEEeCc-eeEEEeeEEEeCC--------cCcEEEcc--CC
Q psy683 7 KAQVLMMVHCGNALAGIQIRTSSDPIVRHNKIHHGQHGGVYVHEKG-VGLIEENEVYANT--------LAGVWITT--GS 75 (137)
Q Consensus 7 ~g~i~~c~I~~~~~~GI~v~~~a~~~i~~n~I~~~~~~GI~v~~~~-~~~i~~n~I~~n~--------~~Gv~v~~--~a 75 (137)
..+|++.+|......||+|.. ++.+|++|+|+++...||++...+ ..+|++|+|++|. ..|+.+.. +.
T Consensus 116 ~~~i~gl~I~n~g~~GI~v~g-s~~~i~n~~i~~n~~~GI~l~~~~s~n~I~nn~i~~N~d~~~~g~~~dG~~~~~~~g~ 194 (400)
T 1ru4_A 116 YWYFKGVEVTRAGYQGAYVIG-SHNTFENTAFHHNRNTGLEINNGGSYNTVINSDAYRNYDPKKNGSMADGFGPKQKQGP 194 (400)
T ss_dssp CEEEESEEEESCSSCSEEECS-SSCEEESCEEESCSSCSEEECTTCCSCEEESCEEECCCCTTTTTSSCCSEEECTTCCS
T ss_pred eEEEEeEEEEeCCCCcEEEeC-CCcEEEeEEEECCCceeEEEEcccCCeEEEceEEEcccCccccCcccceEEEEecccC
Confidence 457777788776666888764 677888888888877788887654 6778888888775 24666653 35
Q ss_pred ccEEEeeEEEcCCcccEEEEeCCe-eEEEccEEEccc------------cCcEEEe---cCCCeEEeceEEecC
Q psy683 76 APVLRRNRIHSGKQVGVYFYDNGH-GKLEDNDIFNHL------------YSGVQIS---NETTATLDACGLRRS 133 (137)
Q Consensus 76 ~~~i~~n~I~~~~~~GI~v~~~~~-g~ie~n~I~~n~------------~~Gi~v~---~~a~p~l~~n~I~~~ 133 (137)
..++++|+++++...||.+..... .+|++|..++|. ..|+.+. .....+|++|....+
T Consensus 195 Gn~~~~~~~~~N~ddGidl~~~~~~v~i~nn~a~~Ng~~~~~~n~~~gngnGf~lgg~~~~~~~~v~nn~a~~N 268 (400)
T 1ru4_A 195 GNRFVGCRAWENSDDGFDLFDSPQKVVIENSWAFRNGINYWNDSAFAGNGNGFKLGGNQAVGNHRITRSVAFGN 268 (400)
T ss_dssp CCEEESCEEESCSSCSEECTTCCSCCEEESCEEESTTCCCSCCTTCCCCCCSEECCCTTCCCCCEEESCEEESC
T ss_pred CeEEECCEEeecCCCcEEEEecCCCEEEEeEEEECCccccccccccccCCCCEEEeccCCcCCEEEEeeEEECC
Confidence 667777777777777777753322 366777766664 2355553 233456666665554
No 3
>2pyg_A Poly(beta-D-mannuronate) C5 epimerase 4; beta-helix, isomerase; 2.10A {Azotobacter vinelandii} PDB: 2pyh_A*
Probab=99.21 E-value=3.3e-10 Score=89.38 Aligned_cols=125 Identities=14% Similarity=0.120 Sum_probs=107.6
Q ss_pred EEEEeeEEEcCccCCEEEecCC-CcEEeccEEEcCCCCcEEEEeCceeEEEeeEEEeCCcCcEEEcc-CCccEEEeeEEE
Q psy683 8 AQVLMMVHCGNALAGIQIRTSS-DPIVRHNKIHHGQHGGVYVHEKGVGLIEENEVYANTLAGVWITT-GSAPVLRRNRIH 85 (137)
Q Consensus 8 g~i~~c~I~~~~~~GI~v~~~a-~~~i~~n~I~~~~~~GI~v~~~~~~~i~~n~I~~n~~~Gv~v~~-~a~~~i~~n~I~ 85 (137)
.+|++++|.+....||.+.... ..++.++.+++....||++......+|++|.+..+...||.+.. ..+.++++|.++
T Consensus 136 v~I~~~~i~n~~~~gi~~~~~~~~~~i~n~~~~~~~~dGI~~~~s~~~~i~~N~~~~~~~~GI~~~~~s~~v~I~nN~i~ 215 (377)
T 2pyg_A 136 VTIERVEVREMSGYGFDPHEQTINLTIRDSVAHDNGLDGFVADYLVDSVFENNVAYANDRHGFNVVTSTHDFVMTNNVAY 215 (377)
T ss_dssp EEEEEEEEECCSSCSEEECSSEEEEEEESCEEESCSSCSEEEESEEEEEEESCEEESCSSCSEEEETTCEEEEEESCEEE
T ss_pred eEEEeEEEEecccceEEeecccCCeEEEeEEeecCCCCceeEeccCCcEEECcEEEccccCcEEEEeccCCeEEECCEEE
Confidence 5899999999999999998655 56777788888888999999887888999999888899999987 677899999999
Q ss_pred cCCcccEEE--------EeCCeeEEEccEEEccccCcEEEecCCCeEEeceEEecC
Q psy683 86 SGKQVGVYF--------YDNGHGKLEDNDIFNHLYSGVQISNETTATLDACGLRRS 133 (137)
Q Consensus 86 ~~~~~GI~v--------~~~~~g~ie~n~I~~n~~~Gi~v~~~a~p~l~~n~I~~~ 133 (137)
++.. |+.+ .....-++++|.+.++...|+.+....+.+|++|+|.++
T Consensus 216 ~~~~-g~~~~~~g~~~~~~s~nv~i~~N~~~~n~~~Gi~~~~~~~v~i~~N~i~~~ 270 (377)
T 2pyg_A 216 GNGS-SGLVVQRGLEDLALPSNILIDGGAYYDNAREGVLLKMTSDITLQNADIHGN 270 (377)
T ss_dssp SCSS-CSEEEECCSSCCCCCEEEEEESCEEESCSSCSEEEEEEEEEEEESCEEESC
T ss_pred CccC-ceEEEeccccCCCCCccEEEECCEEEcCccCceEeccccCeEEECCEEECC
Confidence 9865 5554 455567899999999988999999999999999999886
No 4
>1ru4_A Pectate lyase, PEL9A; parallel beta-helix; 1.60A {Erwinia chrysanthemi} SCOP: b.80.1.9
Probab=99.17 E-value=4.5e-10 Score=90.31 Aligned_cols=128 Identities=13% Similarity=0.108 Sum_probs=82.4
Q ss_pred ceEEEEeeEEEcCccCCEEEecCC-CcEEeccEEEcCC--------CCcEEEEeC--ceeEEEeeEEEeCCcCcEEEccC
Q psy683 6 GKAQVLMMVHCGNALAGIQIRTSS-DPIVRHNKIHHGQ--------HGGVYVHEK--GVGLIEENEVYANTLAGVWITTG 74 (137)
Q Consensus 6 g~g~i~~c~I~~~~~~GI~v~~~a-~~~i~~n~I~~~~--------~~GI~v~~~--~~~~i~~n~I~~n~~~Gv~v~~~ 74 (137)
...+|++|+|+++...||++...+ +.+|.+|+|+++. ..|+.+... ...+|++|++++|...|+.+...
T Consensus 137 s~~~i~n~~i~~n~~~GI~l~~~~s~n~I~nn~i~~N~d~~~~g~~~dG~~~~~~~g~Gn~~~~~~~~~N~ddGidl~~~ 216 (400)
T 1ru4_A 137 SHNTFENTAFHHNRNTGLEINNGGSYNTVINSDAYRNYDPKKNGSMADGFGPKQKQGPGNRFVGCRAWENSDDGFDLFDS 216 (400)
T ss_dssp SSCEEESCEEESCSSCSEEECTTCCSCEEESCEEECCCCTTTTTSSCCSEEECTTCCSCCEEESCEEESCSSCSEECTTC
T ss_pred CCcEEEeEEEECCCceeEEEEcccCCeEEEceEEEcccCccccCcccceEEEEecccCCeEEECCEEeecCCCcEEEEec
Confidence 466899999999988899998654 8999999999875 247765432 34467777777777777777543
Q ss_pred Cc-cEEEeeEEEcCC------------cccEEEEeC---CeeEEEccEEEccccCcEEEecCCC-eEEeceEEecC
Q psy683 75 SA-PVLRRNRIHSGK------------QVGVYFYDN---GHGKLEDNDIFNHLYSGVQISNETT-ATLDACGLRRS 133 (137)
Q Consensus 75 a~-~~i~~n~I~~~~------------~~GI~v~~~---~~g~ie~n~I~~n~~~Gi~v~~~a~-p~l~~n~I~~~ 133 (137)
.. .+|++|..+.++ +.|+.+... .+-++++|..++|...|+....... .+|++|+..++
T Consensus 217 ~~~v~i~nn~a~~Ng~~~~~~n~~~gngnGf~lgg~~~~~~~~v~nn~a~~N~~~G~~~n~~~~~~~i~nNt~~~N 292 (400)
T 1ru4_A 217 PQKVVIENSWAFRNGINYWNDSAFAGNGNGFKLGGNQAVGNHRITRSVAFGNVSKGFDQNNNAGGVTVINNTSYKN 292 (400)
T ss_dssp CSCCEEESCEEESTTCCCSCCTTCCCCCCSEECCCTTCCCCCEEESCEEESCSSEEEECTTCSSCCEEESCEEESS
T ss_pred CCCEEEEeEEEECCccccccccccccCCCCEEEeccCCcCCEEEEeeEEECCcCcCEeecCCCCCEEEECeEEECC
Confidence 33 356666666553 345555322 2445666666666666666544332 45666655544
No 5
>2inu_A Insulin fructotransferase; right-handed parallel beta-helix, lyase; 1.80A {Bacillus SP} PDB: 2inv_A*
Probab=99.05 E-value=9.7e-10 Score=88.10 Aligned_cols=123 Identities=13% Similarity=0.087 Sum_probs=73.7
Q ss_pred EEEEeeEEEcCccCCEEEecCCCcEEeccEEEcCCCCcEEEEeCce-eEEEeeEEEeCCc-CcEEEccCCccEEEeeEEE
Q psy683 8 AQVLMMVHCGNALAGIQIRTSSDPIVRHNKIHHGQHGGVYVHEKGV-GLIEENEVYANTL-AGVWITTGSAPVLRRNRIH 85 (137)
Q Consensus 8 g~i~~c~I~~~~~~GI~v~~~a~~~i~~n~I~~~~~~GI~v~~~~~-~~i~~n~I~~n~~-~Gv~v~~~a~~~i~~n~I~ 85 (137)
.+|++|.|.++ ..||++....+.+|++|.|.+++ .||.+.+.++ ..|++|.+..... .||+++......+++|.++
T Consensus 173 ~~I~nn~i~~~-~fGI~l~~a~~~~I~~N~I~e~G-NgI~L~G~~~~~~I~~N~i~~~~dG~gIyl~ns~~~~I~~N~i~ 250 (410)
T 2inu_A 173 FHITGMGFVYL-EHALIVRGADALRVNDNMIAECG-NCVELTGAGQATIVSGNHMGAGPDGVTLLAENHEGLLVTGNNLF 250 (410)
T ss_dssp CEEESCEEESC-SEEEEETTEESCEEESCEEESSS-EEEEECSCEESCEEESCEEECCTTSEEEEEESEESCEEESCEEC
T ss_pred EEEECCEEecc-cEEEEEccCCCcEEECCEEEecC-CceeeccccccceEecceeeecCCCCEEEEEeCCCCEEECCCcc
Confidence 45777777775 36777766667777777776433 5555555333 2455555544321 2366666666667777665
Q ss_pred cCCcccEEEEeCCeeEEEccEEEccccCcEEEecCC--CeEEeceEEecC
Q psy683 86 SGKQVGVYFYDNGHGKLEDNDIFNHLYSGVQISNET--TATLDACGLRRS 133 (137)
Q Consensus 86 ~~~~~GI~v~~~~~g~ie~n~I~~n~~~Gi~v~~~a--~p~l~~n~I~~~ 133 (137)
.....||++....+..+++|+++++. .|+.+-..- +-.+++|++.++
T Consensus 251 ~~~R~gIh~m~s~~~~i~~N~f~~~~-~Gi~~M~s~~~~n~v~~N~f~~~ 299 (410)
T 2inu_A 251 PRGRSLIEFTGCNRCSVTSNRLQGFY-PGMLRLLNGCKENLITANHIRRT 299 (410)
T ss_dssp SCSSEEEEEESCBSCEEESCEEEESS-SCSEEEESSCBSCEEESCEEEEE
T ss_pred cCcceEEEEEccCCCEEECCEEecce-eEEEEEEcCCCCCEEECCEEecc
Confidence 54556777766666666777666665 355555433 666666666543
No 6
>2inu_A Insulin fructotransferase; right-handed parallel beta-helix, lyase; 1.80A {Bacillus SP} PDB: 2inv_A*
Probab=98.97 E-value=5.7e-09 Score=83.66 Aligned_cols=125 Identities=14% Similarity=0.075 Sum_probs=104.4
Q ss_pred eEEEEeeEEEcCccCCEEEec-CCCcEEeccEEEcCCC-CcEEEEeCceeEEEeeEEEeCCcCcEEEccCCccEEEeeEE
Q psy683 7 KAQVLMMVHCGNALAGIQIRT-SSDPIVRHNKIHHGQH-GGVYVHEKGVGLIEENEVYANTLAGVWITTGSAPVLRRNRI 84 (137)
Q Consensus 7 ~g~i~~c~I~~~~~~GI~v~~-~a~~~i~~n~I~~~~~-~GI~v~~~~~~~i~~n~I~~n~~~Gv~v~~~a~~~i~~n~I 84 (137)
..+|++|.|.+ ...||.+++ +-...|++|.+..... .||++......+|++|.++.....||++....+.++++|++
T Consensus 194 ~~~I~~N~I~e-~GNgI~L~G~~~~~~I~~N~i~~~~dG~gIyl~ns~~~~I~~N~i~~~~R~gIh~m~s~~~~i~~N~f 272 (410)
T 2inu_A 194 ALRVNDNMIAE-CGNCVELTGAGQATIVSGNHMGAGPDGVTLLAENHEGLLVTGNNLFPRGRSLIEFTGCNRCSVTSNRL 272 (410)
T ss_dssp SCEEESCEEES-SSEEEEECSCEESCEEESCEEECCTTSEEEEEESEESCEEESCEECSCSSEEEEEESCBSCEEESCEE
T ss_pred CcEEECCEEEe-cCCceeeccccccceEecceeeecCCCCEEEEEeCCCCEEECCCcccCcceEEEEEccCCCEEECCEE
Confidence 45889999997 457899987 4467888999887652 35999988889999999988888999999999999999999
Q ss_pred EcCCcccEEEEeCC--eeEEEccEEEccccC---------------cEEEecCCCeEEeceEEecC
Q psy683 85 HSGKQVGVYFYDNG--HGKLEDNDIFNHLYS---------------GVQISNETTATLDACGLRRS 133 (137)
Q Consensus 85 ~~~~~~GI~v~~~~--~g~ie~n~I~~n~~~---------------Gi~v~~~a~p~l~~n~I~~~ 133 (137)
++++ .|+.+...- ..++++|.+..+... ||.+....+..|.+|+|..+
T Consensus 273 ~~~~-~Gi~~M~s~~~~n~v~~N~f~~~~~g~a~M~s~~~~~d~~~Gill~~~~~~~i~~N~i~~~ 337 (410)
T 2inu_A 273 QGFY-PGMLRLLNGCKENLITANHIRRTNEGYPPFIGRGNGLDDLYGVVHIAGDNNLISDNLFAYN 337 (410)
T ss_dssp EESS-SCSEEEESSCBSCEEESCEEEEECCCSGGGTTCCCSCCTTSCSEEEESSSCEEEEEEEEEE
T ss_pred ecce-eEEEEEEcCCCCCEEECCEEeccCCceeeeeccCCCCCccEeeEEEeecCcEEECCEEEee
Confidence 9886 798888855 889999999977544 88888899999999999877
No 7
>1dbg_A Chondroitinase B; beta helix, polysaccharide lyase, dematan sulfate; HET: MAN RAM GCU MXY G4D BGC; 1.70A {Pedobacter heparinus} SCOP: b.80.1.4 PDB: 1dbo_A* 1ofl_A* 1ofm_A*
Probab=98.60 E-value=1.4e-06 Score=71.98 Aligned_cols=108 Identities=13% Similarity=0.126 Sum_probs=60.1
Q ss_pred EEEEeeEEEcCccCCEEEe--cCCCcEEeccEEEcCCCCcEEEEeCceeEEEeeEEEeCC----cCcEEEccCCccEEEe
Q psy683 8 AQVLMMVHCGNALAGIQIR--TSSDPIVRHNKIHHGQHGGVYVHEKGVGLIEENEVYANT----LAGVWITTGSAPVLRR 81 (137)
Q Consensus 8 g~i~~c~I~~~~~~GI~v~--~~a~~~i~~n~I~~~~~~GI~v~~~~~~~i~~n~I~~n~----~~Gv~v~~~a~~~i~~ 81 (137)
-+|++|.++++. .|..+. .+.+.+|++|++.++. .||.+......+|++|.+.+|. ..||.+... +-+|++
T Consensus 230 ~~VenN~f~~~~-gg~aim~skS~~n~i~~N~~~~~~-ggi~l~~~~~s~I~~N~f~gN~~~~~~~Gi~i~~~-~~~I~n 306 (506)
T 1dbg_A 230 CLVDSNLFMRQD-SEAEIITSKSQENVYYGNTYLNCQ-GTMNFRHGDHQVAINNFYIGNDQRFGYGGMFVWGS-RHVIAC 306 (506)
T ss_dssp CEEESCEEEEEC-SSSEEEEEESBSCEEESCEEESCS-SEEEEEECSSCEEESCEEEECSSSSCBCCEEECSB-SCEEES
T ss_pred cEEECCEEEecc-CcEEEEEEecCCEEEECCEEEccc-CcEEEeecCccEEECCEEECCcCccCceEEEEECC-CCEEEC
Confidence 355555555542 232222 2334566666666654 3666665555666666666665 456666433 336666
Q ss_pred eEEEcCCc------ccEEEEeCC---------eeEEEccEEEccccCcEEEe
Q psy683 82 NRIHSGKQ------VGVYFYDNG---------HGKLEDNDIFNHLYSGVQIS 118 (137)
Q Consensus 82 n~I~~~~~------~GI~v~~~~---------~g~ie~n~I~~n~~~Gi~v~ 118 (137)
|.+..+.. .||.+..+. ..++++|.|.+|...||++.
T Consensus 307 N~f~~~~g~~~~~~~GI~i~~G~~~~~~~~~~~~~I~~Ntfi~n~~~gI~~~ 358 (506)
T 1dbg_A 307 NYFELSETIKSRGNAALYLNPGAMASEHALAFDMLIANNAFINVNGYAIHFN 358 (506)
T ss_dssp CEEEESSBCGGGTSEEEEECCBCTTSTTCCCBSEEEESCEEESCSSEEEESS
T ss_pred CEEECCcCccccccccEEEecCCCccccccccCcEEECCEEECCccccEEEc
Confidence 66666642 266665332 55666666666665466665
No 8
>1dbg_A Chondroitinase B; beta helix, polysaccharide lyase, dematan sulfate; HET: MAN RAM GCU MXY G4D BGC; 1.70A {Pedobacter heparinus} SCOP: b.80.1.4 PDB: 1dbo_A* 1ofl_A* 1ofm_A*
Probab=98.58 E-value=2.4e-06 Score=70.52 Aligned_cols=126 Identities=12% Similarity=0.050 Sum_probs=85.7
Q ss_pred eEEEEeeEEEc-----CccCCEEEec----CCCcEEeccEEEcCCC-CcEEEEeCceeEEEeeEEEeCCcCcEEEccCCc
Q psy683 7 KAQVLMMVHCG-----NALAGIQIRT----SSDPIVRHNKIHHGQH-GGVYVHEKGVGLIEENEVYANTLAGVWITTGSA 76 (137)
Q Consensus 7 ~g~i~~c~I~~-----~~~~GI~v~~----~a~~~i~~n~I~~~~~-~GI~v~~~~~~~i~~n~I~~n~~~Gv~v~~~a~ 76 (137)
..+|++|.|.. |...+|++.. ..+.++++|.+.++.. ..|+...++..+|.+|.++++.+ ||.+....+
T Consensus 197 ~~~I~nN~f~~~~~~~N~~e~iR~G~h~m~s~~~~VenN~f~~~~gg~aim~skS~~n~i~~N~~~~~~g-gi~l~~~~~ 275 (506)
T 1dbg_A 197 YHRVDHCFFSNPQKPGNAGGGIRIGYYRNDIGRCLVDSNLFMRQDSEAEIITSKSQENVYYGNTYLNCQG-TMNFRHGDH 275 (506)
T ss_dssp CCEEESCEEEECCCSSSCCCSEEECSSTTCBCCCEEESCEEEEECSSSEEEEEESBSCEEESCEEESCSS-EEEEEECSS
T ss_pred CeEEeCcEEcccccCCCccccEEEEEEecccCCcEEECCEEEeccCcEEEEEEecCCEEEECCEEEcccC-cEEEeecCc
Confidence 34667777765 3455666652 3577788888877642 23444444457788888887644 787777777
Q ss_pred cEEEeeEEEcCC----cccEEEEeCCeeEEEccEEEcccc------CcEEEecCC---------CeEEeceEEecCc
Q psy683 77 PVLRRNRIHSGK----QVGVYFYDNGHGKLEDNDIFNHLY------SGVQISNET---------TATLDACGLRRSM 134 (137)
Q Consensus 77 ~~i~~n~I~~~~----~~GI~v~~~~~g~ie~n~I~~n~~------~Gi~v~~~a---------~p~l~~n~I~~~~ 134 (137)
.+|.+|.+..+. ..||++..... ++.+|.|.++.. .||.+..++ +..|.+|++..+.
T Consensus 276 s~I~~N~f~gN~~~~~~~Gi~i~~~~~-~I~nN~f~~~~g~~~~~~~GI~i~~G~~~~~~~~~~~~~I~~Ntfi~n~ 351 (506)
T 1dbg_A 276 QVAINNFYIGNDQRFGYGGMFVWGSRH-VIACNYFELSETIKSRGNAALYLNPGAMASEHALAFDMLIANNAFINVN 351 (506)
T ss_dssp CEEESCEEEECSSSSCBCCEEECSBSC-EEESCEEEESSBCGGGTSEEEEECCBCTTSTTCCCBSEEEESCEEESCS
T ss_pred cEEECCEEECCcCccCceEEEEECCCC-EEECCEEECCcCccccccccEEEecCCCccccccccCcEEECCEEECCc
Confidence 788888888876 46788866555 888888888753 377777544 6677777777664
No 9
>1rmg_A Rgase A, rhamnogalacturonase A; hydrolase, inverting, parallel beta-helix, glycosidase; HET: NAG BMA MAN GLC; 2.00A {Aspergillus aculeatus} SCOP: b.80.1.3
Probab=98.13 E-value=6.1e-05 Score=60.74 Aligned_cols=117 Identities=15% Similarity=0.043 Sum_probs=84.0
Q ss_pred EEEEeeEEEcCccCCEEEecCCCcEEeccEEEcC---CCCcEEEEeCceeEEEeeEEEeCCcCcEEEcc-CCccEEEeeE
Q psy683 8 AQVLMMVHCGNALAGIQIRTSSDPIVRHNKIHHG---QHGGVYVHEKGVGLIEENEVYANTLAGVWITT-GSAPVLRRNR 83 (137)
Q Consensus 8 g~i~~c~I~~~~~~GI~v~~~a~~~i~~n~I~~~---~~~GI~v~~~~~~~i~~n~I~~n~~~Gv~v~~-~a~~~i~~n~ 83 (137)
-+|++.+|.+....+|.+....+.+|++++|... ...||-+.. ...+|++|.|. +..++|.+.. ..+.++++|.
T Consensus 138 v~I~~iti~nsp~~~i~i~~~~nv~I~n~~I~~~d~~ntDGidi~~-~nV~I~n~~i~-~gDD~Iai~s~~~nI~I~n~~ 215 (422)
T 1rmg_A 138 FSVHDIILVDAPAFHFTMDTCSDGEVYNMAIRGGNEGGLDGIDVWG-SNIWVHDVEVT-NKDECVTVKSPANNILVESIY 215 (422)
T ss_dssp EEEEEEEEECCSSCSEEEEEEEEEEEEEEEEECCSSTTCCSEEEEE-EEEEEEEEEEE-SSSEEEEEEEEEEEEEEEEEE
T ss_pred EEEECeEEECCCceEEEEeCcCCEEEEeEEEECCCCCCCccEeecC-CeEEEEeeEEe-CCCCeEEeCCCCcCEEEEeEE
Confidence 4677778888888899998888899999999861 347898888 77788888885 5667888886 6777888888
Q ss_pred EEcCCcccEEEEeCC------eeEEEccEEEccccCcEEEec-CCCeEEeceE
Q psy683 84 IHSGKQVGVYFYDNG------HGKLEDNDIFNHLYSGVQISN-ETTATLDACG 129 (137)
Q Consensus 84 I~~~~~~GI~v~~~~------~g~ie~n~I~~n~~~Gi~v~~-~a~p~l~~n~ 129 (137)
.... +||.+...+ .-++++|.+.+.. .||.++. .....+++-.
T Consensus 216 ~~~~--~GisIGS~g~~~~v~nV~v~n~~~~~~~-~Gi~Ikt~~g~G~v~nI~ 265 (422)
T 1rmg_A 216 CNWS--GGCAMGSLGADTDVTDIVYRNVYTWSSN-QMYMIKSNGGSGTVSNVL 265 (422)
T ss_dssp EESS--SEEEEEEECTTEEEEEEEEEEEEEESSS-CSEEEEEBBCCEEEEEEE
T ss_pred EcCC--cceeecccCCCCcEEEEEEEeEEEeccc-eEEEEEecCCCcEEEEEE
Confidence 6553 588885433 1257778777765 5888874 2234444433
No 10
>1bhe_A PEHA, polygalacturonase; family 28 glycosyl hydrolase, hydrolyses polygalacturonic acid, glycosidase; 1.90A {Pectobacterium carotovorum subsp} SCOP: b.80.1.3
Probab=98.11 E-value=0.00011 Score=58.30 Aligned_cols=108 Identities=9% Similarity=0.033 Sum_probs=80.4
Q ss_pred EEEEeeEEEcCccCCEEEecCCCcEEeccEEEcC----CCCcEEEEeCceeEEEeeEEEeCCcCcEEEc------cCCcc
Q psy683 8 AQVLMMVHCGNALAGIQIRTSSDPIVRHNKIHHG----QHGGVYVHEKGVGLIEENEVYANTLAGVWIT------TGSAP 77 (137)
Q Consensus 8 g~i~~c~I~~~~~~GI~v~~~a~~~i~~n~I~~~----~~~GI~v~~~~~~~i~~n~I~~n~~~Gv~v~------~~a~~ 77 (137)
-+|++.+|.+.....+.+....+.++++.+|... ...||-+......+|++|.|. +..++|.+. ...+.
T Consensus 162 v~I~~iti~nsp~~~i~~~~~~~v~i~~v~I~~~~~~~NtDGid~~~s~nV~I~n~~i~-~gDDcIaiks~~~~~~s~nI 240 (376)
T 1bhe_A 162 FTLYNVSLINSPNFHVVFSDGDGFTAWKTTIKTPSTARNTDGIDPMSSKNITIAYSNIA-TGDDNVAIKAYKGRAETRNI 240 (376)
T ss_dssp EEEEEEEEECCSSCSEEEESCEEEEEEEEEEECCTTCSSCCSEEEESCEEEEEESCEEE-CSSCSEEEEECTTSCCEEEE
T ss_pred EEEEeEEEECCCcEEEEEeCCCcEEEEeEEEECCCCCCCCceEeecCCceEEEEeCEEe-cCCCeEEEcccCCCCCceEE
Confidence 4678888888888888888777888888888763 246888877777788888885 556788887 35566
Q ss_pred EEEeeEEEcCCcccEEEEeCC----eeEEEccEEEccccCcEEEec
Q psy683 78 VLRRNRIHSGKQVGVYFYDNG----HGKLEDNDIFNHLYSGVQISN 119 (137)
Q Consensus 78 ~i~~n~I~~~~~~GI~v~~~~----~g~ie~n~I~~n~~~Gi~v~~ 119 (137)
++++|.+.. ++||.+.... .-++++|.|.+.. .|+.++.
T Consensus 241 ~I~n~~~~~--ghGisiGSe~~~v~nV~v~n~~~~~t~-~GirIKt 283 (376)
T 1bhe_A 241 SILHNDFGT--GHGMSIGSETMGVYNVTVDDLKMNGTT-NGLRIKS 283 (376)
T ss_dssp EEEEEEECS--SSCEEEEEEESSEEEEEEEEEEEESCS-EEEEEEC
T ss_pred EEEeeEEEc--cccEEeccCCccEeeEEEEeeEEeCCC-cEEEEEE
Confidence 788888765 5788774322 3468888888765 5888875
No 11
>1ia5_A Polygalacturonase; glycosylhydrolase, hydrolase; HET: MAN NAG; 2.00A {Aspergillus aculeatus} SCOP: b.80.1.3 PDB: 1ib4_A*
Probab=98.07 E-value=0.00012 Score=57.29 Aligned_cols=108 Identities=15% Similarity=0.142 Sum_probs=87.4
Q ss_pred EEEEeeEEEcCccCCEEEecCCCcEEeccEEEcC--------CCCcEEEEeCceeEEEeeEEEeCCcCcEEEccCCccEE
Q psy683 8 AQVLMMVHCGNALAGIQIRTSSDPIVRHNKIHHG--------QHGGVYVHEKGVGLIEENEVYANTLAGVWITTGSAPVL 79 (137)
Q Consensus 8 g~i~~c~I~~~~~~GI~v~~~a~~~i~~n~I~~~--------~~~GI~v~~~~~~~i~~n~I~~n~~~Gv~v~~~a~~~i 79 (137)
.+|++.+|.+....+|.+....+.+|++++|... ...||.+......+|++|.|. +..++|.+..+.+.++
T Consensus 115 v~i~~i~i~nsp~~~i~i~~~~nv~i~~~~I~~~~~d~~~~~ntDGid~~~s~nV~I~n~~i~-~gDDcIaiksg~nI~i 193 (339)
T 1ia5_A 115 SVISGLKIVNSPVQVFSVAGSDYLTLKDITIDNSDGDDNGGHNTDAFDIGTSTYVTISGATVY-NQDDCVAVNSGENIYF 193 (339)
T ss_dssp EEEESCEEECCSSCCEEEESCEEEEEESCEEECGGGTTTTCCSCCSEEEESCEEEEEESCEEE-CSSCSEEESSEEEEEE
T ss_pred EEEEEEEEEcCCcceEEEecccCeEEeeEEEECCccccccCCCCCcEEecCCceEEEEeeEEE-cCCCeEEEeCCeEEEE
Confidence 5788999999999999999888999999999864 146899988888889999985 5678999998899999
Q ss_pred EeeEEEcCCcccEEEEeC--------CeeEEEccEEEccccCcEEEec
Q psy683 80 RRNRIHSGKQVGVYFYDN--------GHGKLEDNDIFNHLYSGVQISN 119 (137)
Q Consensus 80 ~~n~I~~~~~~GI~v~~~--------~~g~ie~n~I~~n~~~Gi~v~~ 119 (137)
++|.+..+ +||.+... ..-++++|.+.+.. .|+.++.
T Consensus 194 ~n~~~~~g--hGisiGS~g~~~~~~v~nV~v~n~~~~~t~-~girIKt 238 (339)
T 1ia5_A 194 SGGYCSGG--HGLSIGSVGGRSDNTVKNVTFVDSTIINSD-NGVRIKT 238 (339)
T ss_dssp ESCEEESS--SCEEEEEECSSSCCEEEEEEEEEEEEESCS-EEEEEEE
T ss_pred EeEEEECC--ceEEECcCCcccCCCEEEEEEEeeEEECCC-cEEEEEE
Confidence 99998864 68888431 12368888888765 5899875
No 12
>2iq7_A Endopolygalacturonase; parallel beta helix, hydrolase; HET: NAG MAN PG4; 1.94A {Colletotrichum lupini}
Probab=98.05 E-value=0.00014 Score=56.98 Aligned_cols=108 Identities=15% Similarity=0.132 Sum_probs=86.8
Q ss_pred EEEEeeEEEcCccCCEEEecCCCcEEeccEEEcCC--------CCcEEEEeCceeEEEeeEEEeCCcCcEEEccCCccEE
Q psy683 8 AQVLMMVHCGNALAGIQIRTSSDPIVRHNKIHHGQ--------HGGVYVHEKGVGLIEENEVYANTLAGVWITTGSAPVL 79 (137)
Q Consensus 8 g~i~~c~I~~~~~~GI~v~~~a~~~i~~n~I~~~~--------~~GI~v~~~~~~~i~~n~I~~n~~~Gv~v~~~a~~~i 79 (137)
.+|++.+|.+....+|.+....+.+|++++|.... ..||.+......+|++|.|. +..++|.+..+.+.++
T Consensus 111 v~i~giti~nsp~~~i~i~~~~nv~i~~~~I~~~~~d~~~~~ntDGid~~~s~nV~I~n~~i~-~gDDciaiksg~nI~i 189 (339)
T 2iq7_A 111 SNIKGLNVLNTPVQAFSINSATTLGVYDVIIDNSAGDSAGGHNTDAFDVGSSTGVYISGANVK-NQDDCLAINSGTNITF 189 (339)
T ss_dssp EEEECCEEECCSSCCEEEESCEEEEEESCEEECGGGGGTTCCSCCSEEEESCEEEEEESCEEE-CSSCSEEESSEEEEEE
T ss_pred EEEEEEEEEeCCcceEEEeccCCEEEEEEEEECCccccccCCCCCcEEEcCcceEEEEecEEe-cCCCEEEEcCCccEEE
Confidence 57888999999899999998889999999998642 46899988888889999985 5677899988889999
Q ss_pred EeeEEEcCCcccEEEEe---C-----CeeEEEccEEEccccCcEEEec
Q psy683 80 RRNRIHSGKQVGVYFYD---N-----GHGKLEDNDIFNHLYSGVQISN 119 (137)
Q Consensus 80 ~~n~I~~~~~~GI~v~~---~-----~~g~ie~n~I~~n~~~Gi~v~~ 119 (137)
++|.+..+ +||.+.. . ..-++++|.+.+.. .|+.++.
T Consensus 190 ~n~~~~~g--hGisiGSlg~~~~~~v~nV~v~n~~~~~~~-~girIkt 234 (339)
T 2iq7_A 190 TGGTCSGG--HGLSIGSVGGRSDNTVKTVTISNSKIVNSD-NGVRIKT 234 (339)
T ss_dssp ESCEEESS--CCEEEEEESSSSCCEEEEEEEEEEEEESCS-EEEEEEE
T ss_pred EeEEEECC--ceEEECcCCcccCCCEEEEEEEeeEEECCC-cEEEEEE
Confidence 99998874 5888844 1 12367888887765 5888865
No 13
>1hg8_A Endopolygalacturonase; hydrolase, pectin degradation; HET: NAG; 1.73A {Fusarium moniliforme} SCOP: b.80.1.3
Probab=97.95 E-value=0.00018 Score=56.54 Aligned_cols=109 Identities=16% Similarity=0.178 Sum_probs=85.2
Q ss_pred eEEEEeeEEEcCccCCEEEecCCCcEEeccEEEcC----------------CCCcEEEEeCceeEEEeeEEEeCCcCcEE
Q psy683 7 KAQVLMMVHCGNALAGIQIRTSSDPIVRHNKIHHG----------------QHGGVYVHEKGVGLIEENEVYANTLAGVW 70 (137)
Q Consensus 7 ~g~i~~c~I~~~~~~GI~v~~~a~~~i~~n~I~~~----------------~~~GI~v~~~~~~~i~~n~I~~n~~~Gv~ 70 (137)
..+|++..|.+....+|.+....+.+|++++|... ...||.+......+|++|.|. +..++|.
T Consensus 114 nv~I~giti~nsp~~~i~i~~~~nv~i~~~~I~~~~~~~~~~~~~~~~~~~NtDGid~~~s~nV~I~n~~i~-~gDDcIa 192 (349)
T 1hg8_A 114 NSKITNLNIQNWPVHCFDITGSSQLTISGLILDNRAGDKPNAKSGSLPAAHNTDGFDISSSDHVTLDNNHVY-NQDDCVA 192 (349)
T ss_dssp SEEEESCEEECCSSEEEEEESCEEEEEEEEEEECGGGSSCCTTTTTSCSCCSCCSEEEESCEEEEEEEEEEE-CSSCSEE
T ss_pred cEEEEEEEEEcCCCceEEEeccCCEEEEEEEEECCCCccccccccccccCCCCCeEEEccccEEEEEeeEEe-cCCCeEE
Confidence 46788888888888999998888899999999853 136898887778889999886 5678999
Q ss_pred EccCCccEEEeeEEEcCCcccEEEEeCC--------eeEEEccEEEccccCcEEEec
Q psy683 71 ITTGSAPVLRRNRIHSGKQVGVYFYDNG--------HGKLEDNDIFNHLYSGVQISN 119 (137)
Q Consensus 71 v~~~a~~~i~~n~I~~~~~~GI~v~~~~--------~g~ie~n~I~~n~~~Gi~v~~ 119 (137)
+..+.+.++++|.+.. ++||.+...+ .-++++|.+.+.. .|++++.
T Consensus 193 iksg~nI~i~n~~~~~--ghGisiGS~G~~~~~~v~nV~v~n~~~~~~~-~GirIKt 246 (349)
T 1hg8_A 193 VTSGTNIVVSNMYCSG--GHGLSIGSVGGKSDNVVDGVQFLSSQVVNSQ-NGCRIKS 246 (349)
T ss_dssp ESSEEEEEEEEEEEES--SCCEEEEEESSSSCCEEEEEEEEEEEEEEEE-EEEEEEE
T ss_pred eeCCeEEEEEeEEEeC--CcceEEccccccccCCEEEEEEEEEEEECCC-cEEEEEe
Confidence 9888888999998875 4688884421 2357888888765 5888865
No 14
>1nhc_A Polygalacturonase I; beta-helix, hydrolase; HET: MAN NAG BMA; 1.70A {Aspergillus niger} SCOP: b.80.1.3
Probab=97.87 E-value=0.00025 Score=55.45 Aligned_cols=107 Identities=15% Similarity=0.176 Sum_probs=83.3
Q ss_pred EEEEeeEEEcCccCCEEEecCCCcEEeccEEEcC--------CCCcEEEEeCceeEEEeeEEEeCCcCcEEEccCCccEE
Q psy683 8 AQVLMMVHCGNALAGIQIRTSSDPIVRHNKIHHG--------QHGGVYVHEKGVGLIEENEVYANTLAGVWITTGSAPVL 79 (137)
Q Consensus 8 g~i~~c~I~~~~~~GI~v~~~a~~~i~~n~I~~~--------~~~GI~v~~~~~~~i~~n~I~~n~~~Gv~v~~~a~~~i 79 (137)
.+|++.+|.+....+|.+. ..+.+|++++|... ...||-+......+|++|.|. +..++|.+..+.+.++
T Consensus 111 v~i~~i~i~nsp~~~i~i~-~~nv~i~~~~I~~~~~d~~~~~ntDGidi~~s~nV~I~n~~i~-~gDDciaiksg~nI~i 188 (336)
T 1nhc_A 111 STFKGINIKNTPVQAISVQ-ATNVHLNDFTIDNSDGDDNGGHNTDGFDISESTGVYISGATVK-NQDDCIAINSGESISF 188 (336)
T ss_dssp EEEESCEEECCSSCCEEEE-EEEEEEESCEEECTTHHHHTCCSCCSEEECSCEEEEEESCEEE-SSSEEEEESSEEEEEE
T ss_pred EEEEEEEEEeCCccEEEEE-eCCEEEEEEEEECCCcccccCCCCCcEEecCCCeEEEEeCEEE-cCCCEEEEeCCeEEEE
Confidence 5788888988888999998 88899999999864 246898887778888899884 4567899988888899
Q ss_pred EeeEEEcCCcccEEEEeC--------CeeEEEccEEEccccCcEEEec
Q psy683 80 RRNRIHSGKQVGVYFYDN--------GHGKLEDNDIFNHLYSGVQISN 119 (137)
Q Consensus 80 ~~n~I~~~~~~GI~v~~~--------~~g~ie~n~I~~n~~~Gi~v~~ 119 (137)
++|.+..+ +||.+... ..-++++|.+.+.. .|+.++.
T Consensus 189 ~n~~~~~g--hGisiGS~g~~~~~~v~nV~v~n~~~~~t~-~girIkt 233 (336)
T 1nhc_A 189 TGGTCSGG--HGLSIGSVGGRDDNTVKNVTISDSTVSNSA-NGVRIKT 233 (336)
T ss_dssp ESCEEESS--SEEEEEEESSSSCCEEEEEEEEEEEEESCS-EEEEEEE
T ss_pred EeEEEECC--cCceEccCccccCCCEEEEEEEeeEEECCC-cEEEEEE
Confidence 99988864 58888441 12357788887765 5888875
No 15
>3gq8_A Preneck appendage protein; beta helix, viral protein; HET: NHE; 2.00A {Bacillus phage PHI29} PDB: 3gq7_A* 3gq9_A* 3gqa_A
Probab=97.84 E-value=0.00015 Score=60.83 Aligned_cols=97 Identities=16% Similarity=0.105 Sum_probs=61.7
Q ss_pred EEEecCCCcEEeccEEEcCCCCcEEEEeC-----------------ceeEEEeeEEEeCCcCcEEEccCCccEEEeeEEE
Q psy683 23 IQIRTSSDPIVRHNKIHHGQHGGVYVHEK-----------------GVGLIEENEVYANTLAGVWITTGSAPVLRRNRIH 85 (137)
Q Consensus 23 I~v~~~a~~~i~~n~I~~~~~~GI~v~~~-----------------~~~~i~~n~I~~n~~~Gv~v~~~a~~~i~~n~I~ 85 (137)
|.+....+.+|++.++.++...|+.+... ...+|++|.|++...++|.+....+.++++|.++
T Consensus 137 I~f~~c~NV~I~gVti~NSp~~gI~I~~~~~NDGid~DGi~fd~~S~NV~I~Nc~I~~tGDDcIaIksseNI~I~Nc~~~ 216 (609)
T 3gq8_A 137 LSIRACHNVYIRDIEAVDCTLHGIDITCGGLDYPYLGDGTTAPNPSENIWIENCEATGFGDDGITTHHSQYINILNCYSH 216 (609)
T ss_dssp EEEESCEEEEEEEEEEESCSSCSEEEECSSSSCCCCCTTCCCSSCCEEEEEESCEEESCSSCSEEECSCEEEEEESCEEE
T ss_pred EEEEeeceEEEEeeEEEeCCCCCeEEeCCCCCccccCCCccccccceeEEEEeeEEEecCCCEEEecCCeeEEEEeEEEE
Confidence 44444445566666666665566665542 2345777777777777777766667777777776
Q ss_pred cCC----cccEEEEeCC-eeEEEccEEEccccCcEEEecC
Q psy683 86 SGK----QVGVYFYDNG-HGKLEDNDIFNHLYSGVQISNE 120 (137)
Q Consensus 86 ~~~----~~GI~v~~~~-~g~ie~n~I~~n~~~Gi~v~~~ 120 (137)
... ..||.+..+. .-++++|.+.++.. ||+++..
T Consensus 217 gp~G~S~~~GIsIGsgs~NVtV~Nc~i~nt~~-GIrIKt~ 255 (609)
T 3gq8_A 217 DPRLTANCNGFEIDDGSRHVVLSNNRSKGCYG-GIEIKAH 255 (609)
T ss_dssp CCSSCSSCCSEEECTTCEEEEEESEEEESSSE-EEEEEEC
T ss_pred CCCCCCCcccEEccCCcccEEEEeeEEECCCC-EEEEEec
Confidence 542 4677776543 34577777776653 7777754
No 16
>1czf_A Polygalacturonase II; beta helix, hydrolase; HET: NAG; 1.68A {Aspergillus niger} SCOP: b.80.1.3
Probab=97.82 E-value=0.00057 Score=54.04 Aligned_cols=107 Identities=14% Similarity=0.103 Sum_probs=83.8
Q ss_pred EEEEeeEEEcCccCCEEEecCCCcEEeccEEEcC--------CCCcEEEEeCceeEEEeeEEEeCCcCcEEEccCCccEE
Q psy683 8 AQVLMMVHCGNALAGIQIRTSSDPIVRHNKIHHG--------QHGGVYVHEKGVGLIEENEVYANTLAGVWITTGSAPVL 79 (137)
Q Consensus 8 g~i~~c~I~~~~~~GI~v~~~a~~~i~~n~I~~~--------~~~GI~v~~~~~~~i~~n~I~~n~~~Gv~v~~~a~~~i 79 (137)
.+|++.++.+....+|.+. ..+.+|++++|... ...||-+......+|++|.|. +..+.|.+..+.+.++
T Consensus 137 v~i~~iti~nsp~~~i~i~-~~nv~i~~~~I~~~~~d~~~~~NtDGidi~~s~nV~I~n~~i~-~gDDcIaiksg~nI~i 214 (362)
T 1czf_A 137 SSITGLNIKNTPLMAFSVQ-ANDITFTDVTINNADGDTQGGHNTDAFDVGNSVGVNIIKPWVH-NQDDCLAVNSGENIWF 214 (362)
T ss_dssp EEEESCEEECCSSCCEEEE-CSSEEEESCEEECGGGGTTTCCSCCSEEECSCEEEEEESCEEE-CSSCSEEESSEEEEEE
T ss_pred EEEEEEEEecCCccEEEEe-eCCEEEEEEEEECCccccccCCCCCceeecCcceEEEEeeEEe-cCCCEEEEeCCeEEEE
Confidence 4788888888888999998 88999999999863 246898877777788899886 5567899988888899
Q ss_pred EeeEEEcCCcccEEEEeCC--------eeEEEccEEEccccCcEEEec
Q psy683 80 RRNRIHSGKQVGVYFYDNG--------HGKLEDNDIFNHLYSGVQISN 119 (137)
Q Consensus 80 ~~n~I~~~~~~GI~v~~~~--------~g~ie~n~I~~n~~~Gi~v~~ 119 (137)
++|.+..+ +||.+...+ .-++++|.+.+.. .|++++.
T Consensus 215 ~n~~~~~g--hGisiGS~G~~~~~~v~nV~v~n~~~~~t~-~GirIKt 259 (362)
T 1czf_A 215 TGGTCIGG--HGLSIGSVGDRSNNVVKNVTIEHSTVSNSE-NAVRIKT 259 (362)
T ss_dssp ESCEEESS--CCEEEEEECSSSCCEEEEEEEEEEEEEEEE-EEEEEEE
T ss_pred EEEEEeCC--ceeEEeeccccCCCCEEEEEEEeeEEECCc-eEEEEEE
Confidence 99998874 688885421 2257788887765 4888864
No 17
>2iq7_A Endopolygalacturonase; parallel beta helix, hydrolase; HET: NAG MAN PG4; 1.94A {Colletotrichum lupini}
Probab=97.75 E-value=0.00025 Score=55.48 Aligned_cols=109 Identities=5% Similarity=0.003 Sum_probs=87.6
Q ss_pred CEEEecCCCcEEeccEEEcCCCCcEEEEeCceeEEEeeEEEeCC--------cCcEEEccCCccEEEeeEEEcCCcccEE
Q psy683 22 GIQIRTSSDPIVRHNKIHHGQHGGVYVHEKGVGLIEENEVYANT--------LAGVWITTGSAPVLRRNRIHSGKQVGVY 93 (137)
Q Consensus 22 GI~v~~~a~~~i~~n~I~~~~~~GI~v~~~~~~~i~~n~I~~n~--------~~Gv~v~~~a~~~i~~n~I~~~~~~GI~ 93 (137)
.|.+....+.+|++.+|.++...+|.+......+|+++.|.... .+|+.+....+.+|++|.|..+ +.+|.
T Consensus 102 ~i~~~~~~nv~i~giti~nsp~~~i~i~~~~nv~i~~~~I~~~~~d~~~~~ntDGid~~~s~nV~I~n~~i~~g-DDcia 180 (339)
T 2iq7_A 102 FFYAHSLKSSNIKGLNVLNTPVQAFSINSATTLGVYDVIIDNSAGDSAGGHNTDAFDVGSSTGVYISGANVKNQ-DDCLA 180 (339)
T ss_dssp CEEEEEEEEEEEECCEEECCSSCCEEEESCEEEEEESCEEECGGGGGTTCCSCCSEEEESCEEEEEESCEEECS-SCSEE
T ss_pred EEEEeeeCcEEEEEEEEEeCCcceEEEeccCCEEEEEEEEECCccccccCCCCCcEEEcCcceEEEEecEEecC-CCEEE
Confidence 57776667889999999999889999998888899999998752 4699999999999999998754 67999
Q ss_pred EEeCCeeEEEccEEEccccCcEEEec---C-----CCeEEeceEEecC
Q psy683 94 FYDNGHGKLEDNDIFNHLYSGVQISN---E-----TTATLDACGLRRS 133 (137)
Q Consensus 94 v~~~~~g~ie~n~I~~n~~~Gi~v~~---~-----a~p~l~~n~I~~~ 133 (137)
+..+..-++++|.+... .||.+.. . .+.++++|++.++
T Consensus 181 iksg~nI~i~n~~~~~g--hGisiGSlg~~~~~~v~nV~v~n~~~~~~ 226 (339)
T 2iq7_A 181 INSGTNITFTGGTCSGG--HGLSIGSVGGRSDNTVKTVTISNSKIVNS 226 (339)
T ss_dssp ESSEEEEEEESCEEESS--CCEEEEEESSSSCCEEEEEEEEEEEEESC
T ss_pred EcCCccEEEEeEEEECC--ceEEECcCCcccCCCEEEEEEEeeEEECC
Confidence 98777778999998874 4888844 1 2336667776554
No 18
>1rmg_A Rgase A, rhamnogalacturonase A; hydrolase, inverting, parallel beta-helix, glycosidase; HET: NAG BMA MAN GLC; 2.00A {Aspergillus aculeatus} SCOP: b.80.1.3
Probab=97.75 E-value=0.00039 Score=55.99 Aligned_cols=108 Identities=8% Similarity=-0.056 Sum_probs=83.0
Q ss_pred CEEEecCCCcEEeccEEEcCCCCcEEEEeCceeEEEeeEEEe---CCcCcEEEccCCccEEEeeEEEcCCcccEEEEe-C
Q psy683 22 GIQIRTSSDPIVRHNKIHHGQHGGVYVHEKGVGLIEENEVYA---NTLAGVWITTGSAPVLRRNRIHSGKQVGVYFYD-N 97 (137)
Q Consensus 22 GI~v~~~a~~~i~~n~I~~~~~~GI~v~~~~~~~i~~n~I~~---n~~~Gv~v~~~a~~~i~~n~I~~~~~~GI~v~~-~ 97 (137)
.|.+....+.+|++.+|.+....+|.+......+|+++.|.. ...+||.+.. .+.+|++|.|..+ +.+|.+.. .
T Consensus 129 ~i~~~~~~nv~I~~iti~nsp~~~i~i~~~~nv~I~n~~I~~~d~~ntDGidi~~-~nV~I~n~~i~~g-DD~Iai~s~~ 206 (422)
T 1rmg_A 129 ILRLTDVTHFSVHDIILVDAPAFHFTMDTCSDGEVYNMAIRGGNEGGLDGIDVWG-SNIWVHDVEVTNK-DECVTVKSPA 206 (422)
T ss_dssp EEEEEEEEEEEEEEEEEECCSSCSEEEEEEEEEEEEEEEEECCSSTTCCSEEEEE-EEEEEEEEEEESS-SEEEEEEEEE
T ss_pred EEEEcccceEEEECeEEECCCceEEEEeCcCCEEEEeEEEECCCCCCCccEeecC-CeEEEEeeEEeCC-CCeEEeCCCC
Confidence 455555667888999999988899999998889999999987 1367999998 8999999999755 67999987 4
Q ss_pred CeeEEEccEEEccccCcEEEecCC------CeEEeceEEecC
Q psy683 98 GHGKLEDNDIFNHLYSGVQISNET------TATLDACGLRRS 133 (137)
Q Consensus 98 ~~g~ie~n~I~~n~~~Gi~v~~~a------~p~l~~n~I~~~ 133 (137)
..-++++|.+... .||.+.... +.++++|.+.++
T Consensus 207 ~nI~I~n~~~~~~--~GisIGS~g~~~~v~nV~v~n~~~~~~ 246 (422)
T 1rmg_A 207 NNILVESIYCNWS--GGCAMGSLGADTDVTDIVYRNVYTWSS 246 (422)
T ss_dssp EEEEEEEEEEESS--SEEEEEEECTTEEEEEEEEEEEEEESS
T ss_pred cCEEEEeEEEcCC--cceeecccCCCCcEEEEEEEeEEEecc
Confidence 5567888886553 499985422 236666766654
No 19
>1bhe_A PEHA, polygalacturonase; family 28 glycosyl hydrolase, hydrolyses polygalacturonic acid, glycosidase; 1.90A {Pectobacterium carotovorum subsp} SCOP: b.80.1.3
Probab=97.75 E-value=0.00047 Score=54.54 Aligned_cols=111 Identities=14% Similarity=0.080 Sum_probs=87.7
Q ss_pred CCEEEecCCCcEEeccEEEcCCCCcEEEEeCceeEEEeeEEEeC----CcCcEEEccCCccEEEeeEEEcCCcccEEEEe
Q psy683 21 AGIQIRTSSDPIVRHNKIHHGQHGGVYVHEKGVGLIEENEVYAN----TLAGVWITTGSAPVLRRNRIHSGKQVGVYFYD 96 (137)
Q Consensus 21 ~GI~v~~~a~~~i~~n~I~~~~~~GI~v~~~~~~~i~~n~I~~n----~~~Gv~v~~~a~~~i~~n~I~~~~~~GI~v~~ 96 (137)
..|.+....+.+|++.++.++...++.+......++.++.|... ..+||.+....+.+|++|.|..+ +.+|.+..
T Consensus 152 ~~i~~~~~~nv~I~~iti~nsp~~~i~~~~~~~v~i~~v~I~~~~~~~NtDGid~~~s~nV~I~n~~i~~g-DDcIaiks 230 (376)
T 1bhe_A 152 RLIQINKSKNFTLYNVSLINSPNFHVVFSDGDGFTAWKTTIKTPSTARNTDGIDPMSSKNITIAYSNIATG-DDNVAIKA 230 (376)
T ss_dssp CSEEEESCEEEEEEEEEEECCSSCSEEEESCEEEEEEEEEEECCTTCSSCCSEEEESCEEEEEESCEEECS-SCSEEEEE
T ss_pred eEEEEEcceEEEEEeEEEECCCcEEEEEeCCCcEEEEeEEEECCCCCCCCceEeecCCceEEEEeCEEecC-CCeEEEcc
Confidence 46778777789999999999888999998888888999999873 35799999889999999999765 68999984
Q ss_pred ------CCeeEEEccEEEccccCcEEEecC----CCeEEeceEEecCc
Q psy683 97 ------NGHGKLEDNDIFNHLYSGVQISNE----TTATLDACGLRRSM 134 (137)
Q Consensus 97 ------~~~g~ie~n~I~~n~~~Gi~v~~~----a~p~l~~n~I~~~~ 134 (137)
...-++++|.+.. .+||.+... .+.++++|++.++.
T Consensus 231 ~~~~~~s~nI~I~n~~~~~--ghGisiGSe~~~v~nV~v~n~~~~~t~ 276 (376)
T 1bhe_A 231 YKGRAETRNISILHNDFGT--GHGMSIGSETMGVYNVTVDDLKMNGTT 276 (376)
T ss_dssp CTTSCCEEEEEEEEEEECS--SSCEEEEEEESSEEEEEEEEEEEESCS
T ss_pred cCCCCCceEEEEEeeEEEc--cccEEeccCCccEeeEEEEeeEEeCCC
Confidence 3345688888875 468888532 24577777777653
No 20
>1ia5_A Polygalacturonase; glycosylhydrolase, hydrolase; HET: MAN NAG; 2.00A {Aspergillus aculeatus} SCOP: b.80.1.3 PDB: 1ib4_A*
Probab=97.74 E-value=0.00028 Score=55.29 Aligned_cols=109 Identities=9% Similarity=0.009 Sum_probs=87.3
Q ss_pred CEEEecCCCcEEeccEEEcCCCCcEEEEeCceeEEEeeEEEeC--------CcCcEEEccCCccEEEeeEEEcCCcccEE
Q psy683 22 GIQIRTSSDPIVRHNKIHHGQHGGVYVHEKGVGLIEENEVYAN--------TLAGVWITTGSAPVLRRNRIHSGKQVGVY 93 (137)
Q Consensus 22 GI~v~~~a~~~i~~n~I~~~~~~GI~v~~~~~~~i~~n~I~~n--------~~~Gv~v~~~a~~~i~~n~I~~~~~~GI~ 93 (137)
.|.+....+.+|++.+|.++...+|.+......+|.++.|... ..+||.+....+.+|++|.|... +.+|.
T Consensus 106 ~i~~~~~~nv~i~~i~i~nsp~~~i~i~~~~nv~i~~~~I~~~~~d~~~~~ntDGid~~~s~nV~I~n~~i~~g-DDcIa 184 (339)
T 1ia5_A 106 FFAAHSLTNSVISGLKIVNSPVQVFSVAGSDYLTLKDITIDNSDGDDNGGHNTDAFDIGTSTYVTISGATVYNQ-DDCVA 184 (339)
T ss_dssp CEEEEEEEEEEEESCEEECCSSCCEEEESCEEEEEESCEEECGGGTTTTCCSCCSEEEESCEEEEEESCEEECS-SCSEE
T ss_pred EEEEeecCcEEEEEEEEEcCCcceEEEecccCeEEeeEEEECCccccccCCCCCcEEecCCceEEEEeeEEEcC-CCeEE
Confidence 5777666788999999999988999999888889999999874 25789999999999999998765 67999
Q ss_pred EEeCCeeEEEccEEEccccCcEEEec---C-----CCeEEeceEEecC
Q psy683 94 FYDNGHGKLEDNDIFNHLYSGVQISN---E-----TTATLDACGLRRS 133 (137)
Q Consensus 94 v~~~~~g~ie~n~I~~n~~~Gi~v~~---~-----a~p~l~~n~I~~~ 133 (137)
+..+..-++++|.+... .||.+.. . .+.++++|++.++
T Consensus 185 iksg~nI~i~n~~~~~g--hGisiGS~g~~~~~~v~nV~v~n~~~~~t 230 (339)
T 1ia5_A 185 VNSGENIYFSGGYCSGG--HGLSIGSVGGRSDNTVKNVTFVDSTIINS 230 (339)
T ss_dssp ESSEEEEEEESCEEESS--SCEEEEEECSSSCCEEEEEEEEEEEEESC
T ss_pred EeCCeEEEEEeEEEECC--ceEEECcCCcccCCCEEEEEEEeeEEECC
Confidence 98777778999998863 4888843 1 2336666766654
No 21
>2uvf_A Exopolygalacturonase; GH28, pectin, cell WALL, hydrolase, periplasm, beta-helix, glycosidase, EXO-activity; HET: AD0; 2.1A {Yersinia enterocolitica} PDB: 2uve_A*
Probab=97.72 E-value=0.00037 Score=58.55 Aligned_cols=108 Identities=12% Similarity=0.031 Sum_probs=81.3
Q ss_pred EEEEeeEEEcCccCCEEEecCCCcEEeccEEEcC---CCCcEEEEeCceeEEEeeEEEeCCcCcEEEccC----------
Q psy683 8 AQVLMMVHCGNALAGIQIRTSSDPIVRHNKIHHG---QHGGVYVHEKGVGLIEENEVYANTLAGVWITTG---------- 74 (137)
Q Consensus 8 g~i~~c~I~~~~~~GI~v~~~a~~~i~~n~I~~~---~~~GI~v~~~~~~~i~~n~I~~n~~~Gv~v~~~---------- 74 (137)
-+|++.+|.+....+|.+....+.+|++.+|... ...||-+......+|++|.|. +..++|.+..+
T Consensus 342 v~I~giti~ns~~~~i~~~~~~nv~i~~v~i~~~~~~NtDGidi~~s~nV~I~n~~i~-~gDD~Iaiksg~~~~g~~~~~ 420 (608)
T 2uvf_A 342 VYLAGFTVRNPAFHGIMNLENHNVVANGLIHQTYDANNGDGIEFGNSQNVMVFNNFFD-TGDDCINFAAGTGEKAQEQEP 420 (608)
T ss_dssp EEEESCEEECCSSCSEEEESCEEEEEESCEEECTTCTTCCSEEEESCEEEEEESCEEE-CSSCSEEEECCCSGGGGGSCC
T ss_pred EEEeCcEEecCCCCEEEEecCCCEEEeeEEEcCCCCCCCCeEEecCCceEEEEeeEEe-cCCceEEecCCcCcccccccc
Confidence 4677888998888999998888899999998641 236999987778889999886 56778988654
Q ss_pred -CccEEEeeEEEcCCcccEE-EEeC-----CeeEEEccEEEccccCcEEEec
Q psy683 75 -SAPVLRRNRIHSGKQVGVY-FYDN-----GHGKLEDNDIFNHLYSGVQISN 119 (137)
Q Consensus 75 -a~~~i~~n~I~~~~~~GI~-v~~~-----~~g~ie~n~I~~n~~~Gi~v~~ 119 (137)
.+.+|++|.+..+ +|+. +..+ ..-++++|.+.+.. .|+.++.
T Consensus 421 s~nI~I~n~~~~~g--hg~~~iGS~~~~~v~nI~v~n~~~~~t~-~GirIKt 469 (608)
T 2uvf_A 421 MKGAWLFNNYFRMG--HGAIVTGSHTGAWIEDILAENNVMYLTD-IGLRAKS 469 (608)
T ss_dssp EEEEEEESCEECSS--SCSEEEESCCTTCEEEEEEESCEEESCS-EEEEEEE
T ss_pred ccCEEEEeEEEeCC--CCeEEEcccCCCCEEEEEEEeEEEECCC-ceEEEee
Confidence 5677888888764 4554 3332 23578888888874 5888864
No 22
>1hg8_A Endopolygalacturonase; hydrolase, pectin degradation; HET: NAG; 1.73A {Fusarium moniliforme} SCOP: b.80.1.3
Probab=97.70 E-value=0.00037 Score=54.77 Aligned_cols=109 Identities=10% Similarity=0.020 Sum_probs=85.5
Q ss_pred CEEE-e-cCCCcEEeccEEEcCCCCcEEEEeCceeEEEeeEEEeC----------------CcCcEEEccCCccEEEeeE
Q psy683 22 GIQI-R-TSSDPIVRHNKIHHGQHGGVYVHEKGVGLIEENEVYAN----------------TLAGVWITTGSAPVLRRNR 83 (137)
Q Consensus 22 GI~v-~-~~a~~~i~~n~I~~~~~~GI~v~~~~~~~i~~n~I~~n----------------~~~Gv~v~~~a~~~i~~n~ 83 (137)
.|.+ . ...+.+|++.+|.+....+|.+......+|+++.|... ..+||.+....+.+|++|.
T Consensus 104 ~i~~~~~~~~nv~I~giti~nsp~~~i~i~~~~nv~i~~~~I~~~~~~~~~~~~~~~~~~~NtDGid~~~s~nV~I~n~~ 183 (349)
T 1hg8_A 104 HFIVVQKTTGNSKITNLNIQNWPVHCFDITGSSQLTISGLILDNRAGDKPNAKSGSLPAAHNTDGFDISSSDHVTLDNNH 183 (349)
T ss_dssp EEEEEEEEESSEEEESCEEECCSSEEEEEESCEEEEEEEEEEECGGGSSCCTTTTTSCSCCSCCSEEEESCEEEEEEEEE
T ss_pred EEEEeecCcCcEEEEEEEEEcCCCceEEEeccCCEEEEEEEEECCCCccccccccccccCCCCCeEEEccccEEEEEeeE
Confidence 5666 4 44479999999999988999999888889999999863 2469999999999999999
Q ss_pred EEcCCcccEEEEeCCeeEEEccEEEccccCcEEEecC--------CCeEEeceEEecC
Q psy683 84 IHSGKQVGVYFYDNGHGKLEDNDIFNHLYSGVQISNE--------TTATLDACGLRRS 133 (137)
Q Consensus 84 I~~~~~~GI~v~~~~~g~ie~n~I~~n~~~Gi~v~~~--------a~p~l~~n~I~~~ 133 (137)
|.. .+.+|.+..+..-++++|.+.. ..||.+... .+.++++|++.++
T Consensus 184 i~~-gDDcIaiksg~nI~i~n~~~~~--ghGisiGS~G~~~~~~v~nV~v~n~~~~~~ 238 (349)
T 1hg8_A 184 VYN-QDDCVAVTSGTNIVVSNMYCSG--GHGLSIGSVGGKSDNVVDGVQFLSSQVVNS 238 (349)
T ss_dssp EEC-SSCSEEESSEEEEEEEEEEEES--SCCEEEEEESSSSCCEEEEEEEEEEEEEEE
T ss_pred Eec-CCCeEEeeCCeEEEEEeEEEeC--CcceEEccccccccCCEEEEEEEEEEEECC
Confidence 985 4689999887777899999875 358988442 2336666666543
No 23
>3gqn_A Preneck appendage protein; beta helix, beta barrel, ATP binding, viral protein; HET: ATP; 2.15A {Bacillus phage PHI29} PDB: 3suc_A*
Probab=97.68 E-value=0.00035 Score=59.98 Aligned_cols=97 Identities=16% Similarity=0.109 Sum_probs=66.7
Q ss_pred EEEecCCCcEEeccEEEcCCCCcEEEEe-----------------CceeEEEeeEEEeCCcCcEEEccCCccEEEeeEEE
Q psy683 23 IQIRTSSDPIVRHNKIHHGQHGGVYVHE-----------------KGVGLIEENEVYANTLAGVWITTGSAPVLRRNRIH 85 (137)
Q Consensus 23 I~v~~~a~~~i~~n~I~~~~~~GI~v~~-----------------~~~~~i~~n~I~~n~~~Gv~v~~~a~~~i~~n~I~ 85 (137)
|.+....+.+|++.++.++...||.+.. ....+|++|.|++...++|.+....+.++++|.++
T Consensus 137 I~f~~ckNV~I~gVti~NSp~~gI~I~np~~NDGid~DGi~fdi~S~NV~I~Nc~I~ntGDDcIAIksSeNI~I~Nc~c~ 216 (772)
T 3gqn_A 137 LSIRACHNVYIRDIEAVDCTLHGIDITCGGLDYPYLGDGTTAPNPSENIWIENCEATGFGDDGITTHHSQYINILNCYSH 216 (772)
T ss_dssp EEEESCEEEEEEEEEEESCSSCSEEEECSSSSCCCCCTTCCCSSCCEEEEEESCEEESCSSCSEEECSCEEEEEESCEEE
T ss_pred EEEEeeceEEEEeEEEEeCCCCCEEEeCCCcCCcCCCcCcccccccceEEEEeeEEEecCcCeEEecCCceEEEEeEEEE
Confidence 4444444566666666666666666653 23356888888887788888877777788888886
Q ss_pred cCC----cccEEEEeCC-eeEEEccEEEccccCcEEEecC
Q psy683 86 SGK----QVGVYFYDNG-HGKLEDNDIFNHLYSGVQISNE 120 (137)
Q Consensus 86 ~~~----~~GI~v~~~~-~g~ie~n~I~~n~~~Gi~v~~~ 120 (137)
... ..||.+..+. .-++++|.+.++.. ||+|+..
T Consensus 217 gphG~S~~~GIsIGsgs~NVtV~Nc~~~nT~n-GIRIKt~ 255 (772)
T 3gqn_A 217 DPRLTANCNGFEIDDGSRHVVLSNNRSKGCYG-GIEIKAH 255 (772)
T ss_dssp CCSSSSSCCSEEECTTCEEEEEEEEEEESSSE-EEEECCC
T ss_pred CCCCCCCcccEEecCCcccEEEEceEEECCCc-EEEEEEe
Confidence 652 5788887654 44577888877664 8888754
No 24
>3jur_A EXO-poly-alpha-D-galacturonosidase; beta-helix, cell WALL biogenesis/degradation, glycosidase; 2.05A {Thermotoga maritima}
Probab=97.63 E-value=0.0007 Score=55.01 Aligned_cols=109 Identities=17% Similarity=0.112 Sum_probs=73.8
Q ss_pred EEEeeEEEcCccCCEEEecCCCcEEeccEEEcC--CCCcEEEEeCceeEEEeeEEEeCCcCcEEEccC------------
Q psy683 9 QVLMMVHCGNALAGIQIRTSSDPIVRHNKIHHG--QHGGVYVHEKGVGLIEENEVYANTLAGVWITTG------------ 74 (137)
Q Consensus 9 ~i~~c~I~~~~~~GI~v~~~a~~~i~~n~I~~~--~~~GI~v~~~~~~~i~~n~I~~n~~~Gv~v~~~------------ 74 (137)
+|++.++.+.....+.+....+.+|++.+|... ...||-+......+|++|.|.. ..++|.+..+
T Consensus 202 ~i~giti~nsp~~~i~~~~~~nv~i~~v~I~~~~~NtDGidi~~s~nV~I~n~~i~~-gDDcIaiksg~~~dg~~~~~ps 280 (448)
T 3jur_A 202 LVEGVKIINSPMWCIHPVLSENVIIRNIEISSTGPNNDGIDPESCKYMLIEKCRFDT-GDDSVVIKSGRDADGRRIGVPS 280 (448)
T ss_dssp EEESCEEESCSSCSEEEESCEEEEEESCEEEECSTTCCSBCCBSCEEEEEESCEEEE-SSEEEEEBCCCHHHHHHHCCCE
T ss_pred EEEeeEEEeCCCceEeeeccCCEEEEeEEEeeccCCCccccccCCcCEEEEeeEEEe-CCCcEEeccCccccccccCCCc
Confidence 566777777777888887777888888888752 2367877766667777887764 5667777654
Q ss_pred CccEEEeeEEEcCCcc-cEEEEeCC-----eeEEEccEEEccccCcEEEec
Q psy683 75 SAPVLRRNRIHSGKQV-GVYFYDNG-----HGKLEDNDIFNHLYSGVQISN 119 (137)
Q Consensus 75 a~~~i~~n~I~~~~~~-GI~v~~~~-----~g~ie~n~I~~n~~~Gi~v~~ 119 (137)
.+.+|++|.++...++ ||.+.... .-++++|.+.+.. .|+.++.
T Consensus 281 ~nI~I~n~~~~~~~gh~gisiGS~~~~~v~nV~v~n~~~~~t~-~GirIKt 330 (448)
T 3jur_A 281 EYILVRDNLVISQASHGGLVIGSEMSGGVRNVVARNNVYMNVE-RALRLKT 330 (448)
T ss_dssp EEEEEESCEEECSSCSEEEEECSSCTTCEEEEEEESCEEESCS-EEEEEEC
T ss_pred eeEEEEEeEEecCCCcceEEECCcccCcEEEEEEEEEEEeccc-ceEEEEE
Confidence 4566778877544444 77775442 3357777775443 5787764
No 25
>3gq8_A Preneck appendage protein; beta helix, viral protein; HET: NHE; 2.00A {Bacillus phage PHI29} PDB: 3gq7_A* 3gq9_A* 3gqa_A
Probab=97.50 E-value=0.0013 Score=55.26 Aligned_cols=102 Identities=17% Similarity=0.130 Sum_probs=78.6
Q ss_pred EEEEeeEEEcCccCCEEEec-----------------CCCcEEeccEEEcCCCCcEEEEeCceeEEEeeEEEeCC----c
Q psy683 8 AQVLMMVHCGNALAGIQIRT-----------------SSDPIVRHNKIHHGQHGGVYVHEKGVGLIEENEVYANT----L 66 (137)
Q Consensus 8 g~i~~c~I~~~~~~GI~v~~-----------------~a~~~i~~n~I~~~~~~GI~v~~~~~~~i~~n~I~~n~----~ 66 (137)
-+|+++++.+....+|.|.. ..+.+|++|+|++.+..+|.+.....-+|++|.+++.. .
T Consensus 145 V~I~gVti~NSp~~gI~I~~~~~NDGid~DGi~fd~~S~NV~I~Nc~I~~tGDDcIaIksseNI~I~Nc~~~gp~G~S~~ 224 (609)
T 3gq8_A 145 VYIRDIEAVDCTLHGIDITCGGLDYPYLGDGTTAPNPSENIWIENCEATGFGDDGITTHHSQYINILNCYSHDPRLTANC 224 (609)
T ss_dssp EEEEEEEEESCSSCSEEEECSSSSCCCCCTTCCCSSCCEEEEEESCEEESCSSCSEEECSCEEEEEESCEEECCSSCSSC
T ss_pred EEEEeeEEEeCCCCCeEEeCCCCCccccCCCccccccceeEEEEeeEEEecCCCEEEecCCeeEEEEeEEEECCCCCCCc
Confidence 57889999988888888864 24678999999988889999976667789999997653 4
Q ss_pred CcEEEccC-CccEEEeeEEEcCCcccEEEEeCCee------EEEccEEEcc
Q psy683 67 AGVWITTG-SAPVLRRNRIHSGKQVGVYFYDNGHG------KLEDNDIFNH 110 (137)
Q Consensus 67 ~Gv~v~~~-a~~~i~~n~I~~~~~~GI~v~~~~~g------~ie~n~I~~n 110 (137)
.||.+..+ .+.++++|.+.++. .||.+.....+ .|++|..++|
T Consensus 225 ~GIsIGsgs~NVtV~Nc~i~nt~-~GIrIKt~~~~~~v~NV~I~n~vs~~n 274 (609)
T 3gq8_A 225 NGFEIDDGSRHVVLSNNRSKGCY-GGIEIKAHGDAPAAYNISINGHMSVED 274 (609)
T ss_dssp CSEEECTTCEEEEEESEEEESSS-EEEEEEECTTSCCCEEEEEEEEEEESC
T ss_pred ccEEccCCcccEEEEeeEEECCC-CEEEEEecCCCCccccEEEECCEeecC
Confidence 79999865 57789999999885 69999866532 3555554444
No 26
>1nhc_A Polygalacturonase I; beta-helix, hydrolase; HET: MAN NAG BMA; 1.70A {Aspergillus niger} SCOP: b.80.1.3
Probab=97.48 E-value=0.0009 Score=52.27 Aligned_cols=108 Identities=9% Similarity=0.084 Sum_probs=85.8
Q ss_pred CEEEecCCCcEEeccEEEcCCCCcEEEEeCceeEEEeeEEEeCC--------cCcEEEccCCccEEEeeEEEcCCcccEE
Q psy683 22 GIQIRTSSDPIVRHNKIHHGQHGGVYVHEKGVGLIEENEVYANT--------LAGVWITTGSAPVLRRNRIHSGKQVGVY 93 (137)
Q Consensus 22 GI~v~~~a~~~i~~n~I~~~~~~GI~v~~~~~~~i~~n~I~~n~--------~~Gv~v~~~a~~~i~~n~I~~~~~~GI~ 93 (137)
.|.+....+.+|++.+|.++...+|.+. ....+|.++.|.... .+||.+....+.+|++|.|..+ +.+|.
T Consensus 102 ~i~~~~~~nv~i~~i~i~nsp~~~i~i~-~~nv~i~~~~I~~~~~d~~~~~ntDGidi~~s~nV~I~n~~i~~g-DDcia 179 (336)
T 1nhc_A 102 FMYIHDVEDSTFKGINIKNTPVQAISVQ-ATNVHLNDFTIDNSDGDDNGGHNTDGFDISESTGVYISGATVKNQ-DDCIA 179 (336)
T ss_dssp CEEEEEEEEEEEESCEEECCSSCCEEEE-EEEEEEESCEEECTTHHHHTCCSCCSEEECSCEEEEEESCEEESS-SEEEE
T ss_pred EEEEeeeCcEEEEEEEEEeCCccEEEEE-eCCEEEEEEEEECCCcccccCCCCCcEEecCCCeEEEEeCEEEcC-CCEEE
Confidence 5777666678999999999988999999 777889999998752 5799999999999999999765 57999
Q ss_pred EEeCCeeEEEccEEEccccCcEEEecC--------CCeEEeceEEecC
Q psy683 94 FYDNGHGKLEDNDIFNHLYSGVQISNE--------TTATLDACGLRRS 133 (137)
Q Consensus 94 v~~~~~g~ie~n~I~~n~~~Gi~v~~~--------a~p~l~~n~I~~~ 133 (137)
+..+..-++++|.+... .||.+..- .+.++++|++.++
T Consensus 180 iksg~nI~i~n~~~~~g--hGisiGS~g~~~~~~v~nV~v~n~~~~~t 225 (336)
T 1nhc_A 180 INSGESISFTGGTCSGG--HGLSIGSVGGRDDNTVKNVTISDSTVSNS 225 (336)
T ss_dssp ESSEEEEEEESCEEESS--SEEEEEEESSSSCCEEEEEEEEEEEEESC
T ss_pred EeCCeEEEEEeEEEECC--cCceEccCccccCCCEEEEEEEeeEEECC
Confidence 98777778999998863 48888441 2336666666554
No 27
>1k5c_A Endopolygalacturonase; beta helical structure, glycoside hydrolase, silver-LEAF IND substance, hydrolase; HET: NAG; 0.96A {Chondrostereum purpureum} SCOP: b.80.1.3 PDB: 1kcc_A* 1kcd_A*
Probab=97.45 E-value=0.0031 Score=49.25 Aligned_cols=107 Identities=14% Similarity=0.123 Sum_probs=78.6
Q ss_pred EEEEeeEEEcCccCCEEEecCCC-cEEeccEEEcC---------CCCcEEEEeCceeEEEeeEEEeCCcCcEEEccCCcc
Q psy683 8 AQVLMMVHCGNALAGIQIRTSSD-PIVRHNKIHHG---------QHGGVYVHEKGVGLIEENEVYANTLAGVWITTGSAP 77 (137)
Q Consensus 8 g~i~~c~I~~~~~~GI~v~~~a~-~~i~~n~I~~~---------~~~GI~v~~~~~~~i~~n~I~~n~~~Gv~v~~~a~~ 77 (137)
.+|++-++.......|.+....+ .+|++.+|... ...|+-+ .....+|++|.|. +..+.|.+..+.+.
T Consensus 107 v~i~giti~nsp~~~i~i~~~~n~v~i~~v~I~~~~~d~~~~~~NtDGidi-~s~nV~I~n~~i~-~gDDcIaiksg~nI 184 (335)
T 1k5c_A 107 GTYKKFEVLNSPAQAISVGPTDAHLTLDGITVDDFAGDTKNLGHNTDGFDV-SANNVTIQNCIVK-NQDDCIAINDGNNI 184 (335)
T ss_dssp EEEESCEEESCSSCCEEEEEEEEEEEEESCEEECGGGGGGGCCCSCCSEEE-ECSSEEEESCEEE-SSSCSEEEEEEEEE
T ss_pred EEEEEEEEECCCcceEEEEccCCeEEEEEEEEECCCCcccccCCCCCeEcc-cCCeEEEEeeEEE-cCCCEEEeeCCeeE
Confidence 57777788888888888877777 88888888753 1358888 7777778888876 55677888877888
Q ss_pred EEEeeEEEcCCcccEEEEeCC------eeEEEccEEEccccCcEEEec
Q psy683 78 VLRRNRIHSGKQVGVYFYDNG------HGKLEDNDIFNHLYSGVQISN 119 (137)
Q Consensus 78 ~i~~n~I~~~~~~GI~v~~~~------~g~ie~n~I~~n~~~Gi~v~~ 119 (137)
++++|.+..+ +||.+...+ .-++++|.+.+.. .|++++.
T Consensus 185 ~i~n~~~~~g--hGisIGS~g~~~~v~nV~v~n~~~~~t~-~girIKt 229 (335)
T 1k5c_A 185 RFENNQCSGG--HGISIGSIATGKHVSNVVIKGNTVTRSM-YGVRIKA 229 (335)
T ss_dssp EEESCEEESS--CCEEEEEECTTCEEEEEEEESCEEEEEE-EEEEEEE
T ss_pred EEEEEEEECC--ccCeEeeccCCCCEEEEEEEeeEEECCC-ceEEEEE
Confidence 8888888874 578885433 1257777777765 4788764
No 28
>3jur_A EXO-poly-alpha-D-galacturonosidase; beta-helix, cell WALL biogenesis/degradation, glycosidase; 2.05A {Thermotoga maritima}
Probab=97.38 E-value=0.0017 Score=52.76 Aligned_cols=112 Identities=13% Similarity=0.054 Sum_probs=89.6
Q ss_pred CCEEEecCCCcEEeccEEEcCCCCcEEEEeCceeEEEeeEEEeC--CcCcEEEccCCccEEEeeEEEcCCcccEEEEeC-
Q psy683 21 AGIQIRTSSDPIVRHNKIHHGQHGGVYVHEKGVGLIEENEVYAN--TLAGVWITTGSAPVLRRNRIHSGKQVGVYFYDN- 97 (137)
Q Consensus 21 ~GI~v~~~a~~~i~~n~I~~~~~~GI~v~~~~~~~i~~n~I~~n--~~~Gv~v~~~a~~~i~~n~I~~~~~~GI~v~~~- 97 (137)
..|.+....+.+|++-++.++...++.+......+|.+..|... ..+|+.+....+.+|++|.|.. .+.+|.+..+
T Consensus 191 ~~i~~~~~~nv~i~giti~nsp~~~i~~~~~~nv~i~~v~I~~~~~NtDGidi~~s~nV~I~n~~i~~-gDDcIaiksg~ 269 (448)
T 3jur_A 191 SFVQFYRCRNVLVEGVKIINSPMWCIHPVLSENVIIRNIEISSTGPNNDGIDPESCKYMLIEKCRFDT-GDDSVVIKSGR 269 (448)
T ss_dssp CSEEEESCEEEEEESCEEESCSSCSEEEESCEEEEEESCEEEECSTTCCSBCCBSCEEEEEESCEEEE-SSEEEEEBCCC
T ss_pred eEEEEEcccceEEEeeEEEeCCCceEeeeccCCEEEEeEEEeeccCCCccccccCCcCEEEEeeEEEe-CCCcEEeccCc
Confidence 36778778899999999999999999999888899999999873 3579999988899999999987 4679999865
Q ss_pred -----------CeeEEEccEEEcccc-CcEEEecC-----CCeEEeceEEecC
Q psy683 98 -----------GHGKLEDNDIFNHLY-SGVQISNE-----TTATLDACGLRRS 133 (137)
Q Consensus 98 -----------~~g~ie~n~I~~n~~-~Gi~v~~~-----a~p~l~~n~I~~~ 133 (137)
..-++++|.+..... .||.+... .+.++++|.+.++
T Consensus 270 ~~dg~~~~~ps~nI~I~n~~~~~~~gh~gisiGS~~~~~v~nV~v~n~~~~~t 322 (448)
T 3jur_A 270 DADGRRIGVPSEYILVRDNLVISQASHGGLVIGSEMSGGVRNVVARNNVYMNV 322 (448)
T ss_dssp HHHHHHHCCCEEEEEEESCEEECSSCSEEEEECSSCTTCEEEEEEESCEEESC
T ss_pred cccccccCCCceeEEEEEeEEecCCCcceEEECCcccCcEEEEEEEEEEEecc
Confidence 345678999854433 48998765 3457777777654
No 29
>1czf_A Polygalacturonase II; beta helix, hydrolase; HET: NAG; 1.68A {Aspergillus niger} SCOP: b.80.1.3
Probab=97.30 E-value=0.0038 Score=49.25 Aligned_cols=107 Identities=6% Similarity=-0.001 Sum_probs=85.3
Q ss_pred CEEEecCCCcEEeccEEEcCCCCcEEEEeCceeEEEeeEEEeC--------CcCcEEEccCCccEEEeeEEEcCCcccEE
Q psy683 22 GIQIRTSSDPIVRHNKIHHGQHGGVYVHEKGVGLIEENEVYAN--------TLAGVWITTGSAPVLRRNRIHSGKQVGVY 93 (137)
Q Consensus 22 GI~v~~~a~~~i~~n~I~~~~~~GI~v~~~~~~~i~~n~I~~n--------~~~Gv~v~~~a~~~i~~n~I~~~~~~GI~ 93 (137)
.|.+....+.+|++.++.++...++.+. ....+|+++.|... ..+|+.+....+.+|++|.|..+ +.+|.
T Consensus 128 ~i~~~~~~nv~i~~iti~nsp~~~i~i~-~~nv~i~~~~I~~~~~d~~~~~NtDGidi~~s~nV~I~n~~i~~g-DDcIa 205 (362)
T 1czf_A 128 FFYAHGLDSSSITGLNIKNTPLMAFSVQ-ANDITFTDVTINNADGDTQGGHNTDAFDVGNSVGVNIIKPWVHNQ-DDCLA 205 (362)
T ss_dssp CEEEEEEETEEEESCEEECCSSCCEEEE-CSSEEEESCEEECGGGGTTTCCSCCSEEECSCEEEEEESCEEECS-SCSEE
T ss_pred EEEEeecccEEEEEEEEecCCccEEEEe-eCCEEEEEEEEECCccccccCCCCCceeecCcceEEEEeeEEecC-CCEEE
Confidence 4777777788999999999988999999 88889999999874 25799999889999999999865 67999
Q ss_pred EEeCCeeEEEccEEEccccCcEEEecC---C-----CeEEeceEEec
Q psy683 94 FYDNGHGKLEDNDIFNHLYSGVQISNE---T-----TATLDACGLRR 132 (137)
Q Consensus 94 v~~~~~g~ie~n~I~~n~~~Gi~v~~~---a-----~p~l~~n~I~~ 132 (137)
+..+..-++++|.+.+. .||.+..- . +.++++|++.+
T Consensus 206 iksg~nI~i~n~~~~~g--hGisiGS~G~~~~~~v~nV~v~n~~~~~ 250 (362)
T 1czf_A 206 VNSGENIWFTGGTCIGG--HGLSIGSVGDRSNNVVKNVTIEHSTVSN 250 (362)
T ss_dssp ESSEEEEEEESCEEESS--CCEEEEEECSSSCCEEEEEEEEEEEEEE
T ss_pred EeCCeEEEEEEEEEeCC--ceeEEeeccccCCCCEEEEEEEeeEEEC
Confidence 98877778999999874 58988541 1 22556666554
No 30
>3gqn_A Preneck appendage protein; beta helix, beta barrel, ATP binding, viral protein; HET: ATP; 2.15A {Bacillus phage PHI29} PDB: 3suc_A*
Probab=97.29 E-value=0.002 Score=55.30 Aligned_cols=91 Identities=19% Similarity=0.137 Sum_probs=72.0
Q ss_pred EEEEeeEEEcCccCCEEEec-----------------CCCcEEeccEEEcCCCCcEEEEeCceeEEEeeEEEeCC----c
Q psy683 8 AQVLMMVHCGNALAGIQIRT-----------------SSDPIVRHNKIHHGQHGGVYVHEKGVGLIEENEVYANT----L 66 (137)
Q Consensus 8 g~i~~c~I~~~~~~GI~v~~-----------------~a~~~i~~n~I~~~~~~GI~v~~~~~~~i~~n~I~~n~----~ 66 (137)
-+|+++++.+....+|.|.. +.+.+|++|+|++.+..+|.+.....-+|++|.+++.. .
T Consensus 145 V~I~gVti~NSp~~gI~I~np~~NDGid~DGi~fdi~S~NV~I~Nc~I~ntGDDcIAIksSeNI~I~Nc~c~gphG~S~~ 224 (772)
T 3gqn_A 145 VYIRDIEAVDCTLHGIDITCGGLDYPYLGDGTTAPNPSENIWIENCEATGFGDDGITTHHSQYINILNCYSHDPRLTANC 224 (772)
T ss_dssp EEEEEEEEESCSSCSEEEECSSSSCCCCCTTCCCSSCCEEEEEESCEEESCSSCSEEECSCEEEEEESCEEECCSSSSSC
T ss_pred EEEEeEEEEeCCCCCEEEeCCCcCCcCCCcCcccccccceEEEEeeEEEecCcCeEEecCCceEEEEeEEEECCCCCCCc
Confidence 47888899888888887763 34678999999988889999966666789999997653 4
Q ss_pred CcEEEccC-CccEEEeeEEEcCCcccEEEEeCCe
Q psy683 67 AGVWITTG-SAPVLRRNRIHSGKQVGVYFYDNGH 99 (137)
Q Consensus 67 ~Gv~v~~~-a~~~i~~n~I~~~~~~GI~v~~~~~ 99 (137)
.||.+..+ .+.++++|.+.++. .||.+...++
T Consensus 225 ~GIsIGsgs~NVtV~Nc~~~nT~-nGIRIKt~~~ 257 (772)
T 3gqn_A 225 NGFEIDDGSRHVVLSNNRSKGCY-GGIEIKAHGD 257 (772)
T ss_dssp CSEEECTTCEEEEEEEEEEESSS-EEEEECCCTT
T ss_pred ccEEecCCcccEEEEceEEECCC-cEEEEEEeCC
Confidence 79999765 57889999998875 5999985543
No 31
>2uvf_A Exopolygalacturonase; GH28, pectin, cell WALL, hydrolase, periplasm, beta-helix, glycosidase, EXO-activity; HET: AD0; 2.1A {Yersinia enterocolitica} PDB: 2uve_A*
Probab=97.21 E-value=0.0066 Score=50.98 Aligned_cols=111 Identities=7% Similarity=-0.027 Sum_probs=86.2
Q ss_pred CCEEEecCCCcEEeccEEEcCCCCcEEEEeCceeEEEeeEEEeC---CcCcEEEccCCccEEEeeEEEcCCcccEEEEeC
Q psy683 21 AGIQIRTSSDPIVRHNKIHHGQHGGVYVHEKGVGLIEENEVYAN---TLAGVWITTGSAPVLRRNRIHSGKQVGVYFYDN 97 (137)
Q Consensus 21 ~GI~v~~~a~~~i~~n~I~~~~~~GI~v~~~~~~~i~~n~I~~n---~~~Gv~v~~~a~~~i~~n~I~~~~~~GI~v~~~ 97 (137)
..|.+....+.+|++.+|.+....+|.+......+|.+..|... ..+||.+....+.+|.+|.|.. .+.+|.+..+
T Consensus 332 ~~i~~~~~~nv~I~giti~ns~~~~i~~~~~~nv~i~~v~i~~~~~~NtDGidi~~s~nV~I~n~~i~~-gDD~Iaiksg 410 (608)
T 2uvf_A 332 SLMTLRGVENVYLAGFTVRNPAFHGIMNLENHNVVANGLIHQTYDANNGDGIEFGNSQNVMVFNNFFDT-GDDCINFAAG 410 (608)
T ss_dssp CSEEEESEEEEEEESCEEECCSSCSEEEESCEEEEEESCEEECTTCTTCCSEEEESCEEEEEESCEEEC-SSCSEEEECC
T ss_pred eEEEEEeeeeEEEeCcEEecCCCCEEEEecCCCEEEeeEEEcCCCCCCCCeEEecCCceEEEEeeEEec-CCceEEecCC
Confidence 46888777789999999999999999999888889999987541 2569999988899999999986 5789999754
Q ss_pred -----------CeeEEEccEEEccccCcEEEecC-----CCeEEeceEEecC
Q psy683 98 -----------GHGKLEDNDIFNHLYSGVQISNE-----TTATLDACGLRRS 133 (137)
Q Consensus 98 -----------~~g~ie~n~I~~n~~~Gi~v~~~-----a~p~l~~n~I~~~ 133 (137)
..-++++|.+.... .++.+... .+.++++|.+.++
T Consensus 411 ~~~~g~~~~~s~nI~I~n~~~~~gh-g~~~iGS~~~~~v~nI~v~n~~~~~t 461 (608)
T 2uvf_A 411 TGEKAQEQEPMKGAWLFNNYFRMGH-GAIVTGSHTGAWIEDILAENNVMYLT 461 (608)
T ss_dssp CSGGGGGSCCEEEEEEESCEECSSS-CSEEEESCCTTCEEEEEEESCEEESC
T ss_pred cCccccccccccCEEEEeEEEeCCC-CeEEEcccCCCCEEEEEEEeEEEECC
Confidence 35578899887643 23445443 2467888887765
No 32
>1gq8_A Pectinesterase; hydrolase, carboxylic ester hydrolase; 1.75A {Daucus carota} SCOP: b.80.1.5
Probab=97.20 E-value=0.032 Score=43.32 Aligned_cols=77 Identities=13% Similarity=0.186 Sum_probs=38.8
Q ss_pred CCCcEEeccEEEcC------CCCcEEEEeCceeEEEeeEEEeCCcCcEEEccCCccEEEeeEEEcCCcccEEEEeCCeeE
Q psy683 28 SSDPIVRHNKIHHG------QHGGVYVHEKGVGLIEENEVYANTLAGVWITTGSAPVLRRNRIHSGKQVGVYFYDNGHGK 101 (137)
Q Consensus 28 ~a~~~i~~n~I~~~------~~~GI~v~~~~~~~i~~n~I~~n~~~Gv~v~~~a~~~i~~n~I~~~~~~GI~v~~~~~g~ 101 (137)
....++++.+|.+. +..+|.+ ...+..|.+|+|.+.. +.+++.. ++-.+++|.|...- -|+.+.+..+
T Consensus 93 a~~f~~~nlt~~Nt~g~~~~qAvAl~v-~~d~~~f~~c~f~g~Q-DTLy~~~-~r~~~~~c~I~G~v---DFIfG~~~a~ 166 (319)
T 1gq8_A 93 GAGFLARDITFQNTAGAAKHQAVALRV-GSDLSAFYRCDILAYQ-DSLYVHS-NRQFFINCFIAGTV---DFIFGNAAVV 166 (319)
T ss_dssp STTCEEEEEEEEECCCGGGCCCCSEEE-CCTTEEEEEEEEECST-TCEEECS-SEEEEESCEEEESS---SCEEESCEEE
T ss_pred CCCEEEEEeEeEccCCCcCCceEEEEe-cCCcEEEEEeEECccc-eeeeecC-ccEEEEecEEEeee---eEEecCCcEE
Confidence 44555555555542 1234444 2334556666666553 3455543 33455666665432 2344555566
Q ss_pred EEccEEEcc
Q psy683 102 LEDNDIFNH 110 (137)
Q Consensus 102 ie~n~I~~n 110 (137)
|++|+|+..
T Consensus 167 f~~c~i~~~ 175 (319)
T 1gq8_A 167 LQDCDIHAR 175 (319)
T ss_dssp EESCEEEEC
T ss_pred EEeeEEEEe
Confidence 666666553
No 33
>1xg2_A Pectinesterase 1; protein-protein complex, beta helix,four helix bundle, hydrolase/hydrolase inhibitor complex; 1.90A {Solanum lycopersicum}
Probab=97.01 E-value=0.059 Score=41.80 Aligned_cols=78 Identities=10% Similarity=0.158 Sum_probs=40.1
Q ss_pred cCCCcEEeccEEEcC------CCCcEEEEeCceeEEEeeEEEeCCcCcEEEccCCccEEEeeEEEcCCcccEEEEeCCee
Q psy683 27 TSSDPIVRHNKIHHG------QHGGVYVHEKGVGLIEENEVYANTLAGVWITTGSAPVLRRNRIHSGKQVGVYFYDNGHG 100 (137)
Q Consensus 27 ~~a~~~i~~n~I~~~------~~~GI~v~~~~~~~i~~n~I~~n~~~Gv~v~~~a~~~i~~n~I~~~~~~GI~v~~~~~g 100 (137)
.....++++.+|.+. +..+|.+ ...+..|.+|+|.+.. +.+++.. ++-.+++|.|...- -|+.+.+..
T Consensus 88 ~a~~f~~~~lt~~Nt~g~~~~qAvAl~v-~~d~~~f~~c~f~g~Q-DTLy~~~-~r~~~~~c~I~G~v---DFIfG~~~a 161 (317)
T 1xg2_A 88 VGQGFILQDICIQNTAGPAKDQAVALRV-GADMSVINRCRIDAYQ-DTLYAHS-QRQFYRDSYVTGTV---DFIFGNAAV 161 (317)
T ss_dssp CSTTCEEESCEEEECCCGGGCCCCSEEE-CCTTEEEESCEEECST-TCEEECS-SEEEEESCEEEESS---SCEEECCEE
T ss_pred ECCCEEEEEeEEecccCCccCceEEEEE-eCCcEEEEEeEeCccc-cceeecC-ccEEEEeeEEEece---eEEcCCceE
Confidence 344556666666543 1234444 2334556666666553 3455543 33455666665432 244455666
Q ss_pred EEEccEEEcc
Q psy683 101 KLEDNDIFNH 110 (137)
Q Consensus 101 ~ie~n~I~~n 110 (137)
+|++|+|+..
T Consensus 162 vf~~c~i~~~ 171 (317)
T 1xg2_A 162 VFQKCQLVAR 171 (317)
T ss_dssp EEESCEEEEC
T ss_pred EEeeeEEEEe
Confidence 6666666553
No 34
>1gq8_A Pectinesterase; hydrolase, carboxylic ester hydrolase; 1.75A {Daucus carota} SCOP: b.80.1.5
Probab=96.97 E-value=0.029 Score=43.61 Aligned_cols=98 Identities=14% Similarity=0.073 Sum_probs=66.4
Q ss_pred EEEeeEEEcC------ccCCEEEecCCCcEEeccEEEcCCCCcEEEEeCceeEEEeeEEEeCCcCcEEEccCCccEEEee
Q psy683 9 QVLMMVHCGN------ALAGIQIRTSSDPIVRHNKIHHGQHGGVYVHEKGVGLIEENEVYANTLAGVWITTGSAPVLRRN 82 (137)
Q Consensus 9 ~i~~c~I~~~------~~~GI~v~~~a~~~i~~n~I~~~~~~GI~v~~~~~~~i~~n~I~~n~~~Gv~v~~~a~~~i~~n 82 (137)
++++.+|... ...+|++ .+.+..|.+|++.+.+ .++++. .++-.+++|.|.++.. +|-..+...+.+|
T Consensus 97 ~~~nlt~~Nt~g~~~~qAvAl~v-~~d~~~f~~c~f~g~Q-DTLy~~-~~r~~~~~c~I~G~vD---FIfG~~~a~f~~c 170 (319)
T 1gq8_A 97 LARDITFQNTAGAAKHQAVALRV-GSDLSAFYRCDILAYQ-DSLYVH-SNRQFFINCFIAGTVD---FIFGNAAVVLQDC 170 (319)
T ss_dssp EEEEEEEEECCCGGGCCCCSEEE-CCTTEEEEEEEEECST-TCEEEC-SSEEEEESCEEEESSS---CEEESCEEEEESC
T ss_pred EEEEeEeEccCCCcCCceEEEEe-cCCcEEEEEeEECccc-eeeeec-CccEEEEecEEEeeee---EEecCCcEEEEee
Confidence 4666777653 3466676 4667889999998776 678775 4566899999988643 3446778889999
Q ss_pred EEEcCC----cccEEEEeC-------CeeEEEccEEEcccc
Q psy683 83 RIHSGK----QVGVYFYDN-------GHGKLEDNDIFNHLY 112 (137)
Q Consensus 83 ~I~~~~----~~GI~v~~~-------~~g~ie~n~I~~n~~ 112 (137)
.|+..+ ..+.+...+ ..-+|.+|+|.....
T Consensus 171 ~i~~~~~~~~~~~~itA~~r~~~~~~~G~vf~~c~i~~~~~ 211 (319)
T 1gq8_A 171 DIHARRPGSGQKNMVTAQGRTDPNQNTGIVIQKSRIGATSD 211 (319)
T ss_dssp EEEECCCSTTCCEEEEEECCCSTTCCCEEEEESCEEEECTT
T ss_pred EEEEecCCCCCceEEEeCCCCCCCCCceEEEECCEEecCCC
Confidence 998754 223333321 134788999987653
No 35
>1k5c_A Endopolygalacturonase; beta helical structure, glycoside hydrolase, silver-LEAF IND substance, hydrolase; HET: NAG; 0.96A {Chondrostereum purpureum} SCOP: b.80.1.3 PDB: 1kcc_A* 1kcd_A*
Probab=96.94 E-value=0.02 Score=44.68 Aligned_cols=105 Identities=10% Similarity=0.095 Sum_probs=82.0
Q ss_pred EEEecCCCcEEeccEEEcCCCCcEEEEeCce-eEEEeeEEEeC---------CcCcEEEccCCccEEEeeEEEcCCcccE
Q psy683 23 IQIRTSSDPIVRHNKIHHGQHGGVYVHEKGV-GLIEENEVYAN---------TLAGVWITTGSAPVLRRNRIHSGKQVGV 92 (137)
Q Consensus 23 I~v~~~a~~~i~~n~I~~~~~~GI~v~~~~~-~~i~~n~I~~n---------~~~Gv~v~~~a~~~i~~n~I~~~~~~GI 92 (137)
|.+.... .+|++-++.+.....+.+..... .+|.+..|... ..+|+.+ ...+.+|++|.|..+ +.+|
T Consensus 100 i~~~~~~-v~i~giti~nsp~~~i~i~~~~n~v~i~~v~I~~~~~d~~~~~~NtDGidi-~s~nV~I~n~~i~~g-DDcI 176 (335)
T 1k5c_A 100 FLKIKGS-GTYKKFEVLNSPAQAISVGPTDAHLTLDGITVDDFAGDTKNLGHNTDGFDV-SANNVTIQNCIVKNQ-DDCI 176 (335)
T ss_dssp SEEEEEE-EEEESCEEESCSSCCEEEEEEEEEEEEESCEEECGGGGGGGCCCSCCSEEE-ECSSEEEESCEEESS-SCSE
T ss_pred EEEeceE-EEEEEEEEECCCcceEEEEccCCeEEEEEEEEECCCCcccccCCCCCeEcc-cCCeEEEEeeEEEcC-CCEE
Confidence 4444433 78889999999999999998888 89999999874 2469999 899999999999865 6799
Q ss_pred EEEeCCeeEEEccEEEccccCcEEEecCC-Ce-----EEeceEEec
Q psy683 93 YFYDNGHGKLEDNDIFNHLYSGVQISNET-TA-----TLDACGLRR 132 (137)
Q Consensus 93 ~v~~~~~g~ie~n~I~~n~~~Gi~v~~~a-~p-----~l~~n~I~~ 132 (137)
.+..+..-++++|.+... .||.+.... .. ++++|++.+
T Consensus 177 aiksg~nI~i~n~~~~~g--hGisIGS~g~~~~v~nV~v~n~~~~~ 220 (335)
T 1k5c_A 177 AINDGNNIRFENNQCSGG--HGISIGSIATGKHVSNVVIKGNTVTR 220 (335)
T ss_dssp EEEEEEEEEEESCEEESS--CCEEEEEECTTCEEEEEEEESCEEEE
T ss_pred EeeCCeeEEEEEEEEECC--ccCeEeeccCCCCEEEEEEEeeEEEC
Confidence 999877788999999974 589886432 23 555555554
No 36
>1xg2_A Pectinesterase 1; protein-protein complex, beta helix,four helix bundle, hydrolase/hydrolase inhibitor complex; 1.90A {Solanum lycopersicum}
Probab=96.93 E-value=0.031 Score=43.36 Aligned_cols=98 Identities=11% Similarity=0.125 Sum_probs=68.1
Q ss_pred EEEeeEEEcC------ccCCEEEecCCCcEEeccEEEcCCCCcEEEEeCceeEEEeeEEEeCCcCcEEEccCCccEEEee
Q psy683 9 QVLMMVHCGN------ALAGIQIRTSSDPIVRHNKIHHGQHGGVYVHEKGVGLIEENEVYANTLAGVWITTGSAPVLRRN 82 (137)
Q Consensus 9 ~i~~c~I~~~------~~~GI~v~~~a~~~i~~n~I~~~~~~GI~v~~~~~~~i~~n~I~~n~~~Gv~v~~~a~~~i~~n 82 (137)
++++.+|... ...+|++ .+.+..|.+|++.+.+ .++++. .++-.+++|.|.++.. +|-..+...+.+|
T Consensus 93 ~~~~lt~~Nt~g~~~~qAvAl~v-~~d~~~f~~c~f~g~Q-DTLy~~-~~r~~~~~c~I~G~vD---FIfG~~~avf~~c 166 (317)
T 1xg2_A 93 ILQDICIQNTAGPAKDQAVALRV-GADMSVINRCRIDAYQ-DTLYAH-SQRQFYRDSYVTGTVD---FIFGNAAVVFQKC 166 (317)
T ss_dssp EEESCEEEECCCGGGCCCCSEEE-CCTTEEEESCEEECST-TCEEEC-SSEEEEESCEEEESSS---CEEECCEEEEESC
T ss_pred EEEEeEEecccCCccCceEEEEE-eCCcEEEEEeEeCccc-cceeec-CccEEEEeeEEEecee---EEcCCceEEEeee
Confidence 4666777654 3466776 5668899999999876 678875 4566899999988754 3556778899999
Q ss_pred EEEcCC----cccEEEEeC-------CeeEEEccEEEcccc
Q psy683 83 RIHSGK----QVGVYFYDN-------GHGKLEDNDIFNHLY 112 (137)
Q Consensus 83 ~I~~~~----~~GI~v~~~-------~~g~ie~n~I~~n~~ 112 (137)
.|+..+ ..+.+...+ ..-+|.+|+|.....
T Consensus 167 ~i~~~~~~~~~~~~itA~~r~~~~~~~G~vf~~c~i~~~~~ 207 (317)
T 1xg2_A 167 QLVARKPGKYQQNMVTAQGRTDPNQATGTSIQFCNIIASSD 207 (317)
T ss_dssp EEEECCCSTTCCEEEEEECCCCTTSCCEEEEESCEEEECTT
T ss_pred EEEEeccCCCCccEEEecCcCCCCCCcEEEEECCEEecCCC
Confidence 998754 234333322 134789999987653
No 37
>1idk_A Pectin lyase A; signal, glycoprotein, multigene family; 1.93A {Aspergillus niger} SCOP: b.80.1.2 PDB: 1idj_A
Probab=96.91 E-value=0.0092 Score=47.13 Aligned_cols=65 Identities=11% Similarity=0.112 Sum_probs=34.3
Q ss_pred CEEEe-cCCCcEEeccEEEcC------CCCcEEEEeCceeEEEeeEEEeCCcCcEEE--ccCCccEEEeeEEEc
Q psy683 22 GIQIR-TSSDPIVRHNKIHHG------QHGGVYVHEKGVGLIEENEVYANTLAGVWI--TTGSAPVLRRNRIHS 86 (137)
Q Consensus 22 GI~v~-~~a~~~i~~n~I~~~------~~~GI~v~~~~~~~i~~n~I~~n~~~Gv~v--~~~a~~~i~~n~I~~ 86 (137)
|+.|. ...+..|++.+|++. ...+|.+.+.....|.+|+++.....-+.+ ......+|.+|.|.+
T Consensus 125 gl~i~~~a~NVIIrnL~i~~~~~~~~~g~DaI~i~~s~nVwIDHcs~s~~~d~~~~~g~~~s~~VTISnn~f~~ 198 (359)
T 1idk_A 125 GLRIVSGAENIIIQNIAVTDINPKYVWGGDAITLDDCDLVWIDHVTTARIGRQHYVLGTSADNRVSLTNNYIDG 198 (359)
T ss_dssp CEEECTTCEEEEEESCEEEEECTTEETSCCSEEECSCEEEEEESCEEEEESSCSEEECCCTTCEEEEESCEEEC
T ss_pred eEEEecCCCcEEEeCeEEEcccccccccCCceeecCCCcEEEEeeEeecCCCCcEEecccCcceEEEECcEecC
Confidence 45554 334556666666652 235666665555566666666553322222 223455666666653
No 38
>1qcx_A Pectin lyase B; beta-helix protein, plant cell WALL; 1.70A {Aspergillus niger} SCOP: b.80.1.2
Probab=96.59 E-value=0.015 Score=45.85 Aligned_cols=67 Identities=9% Similarity=0.130 Sum_probs=43.7
Q ss_pred CCEEEe-cCCCcEEeccEEEcCC------CCcEEEEeCceeEEEeeEEEeCCcCcEEE-c-cCCccEEEeeEEEcC
Q psy683 21 AGIQIR-TSSDPIVRHNKIHHGQ------HGGVYVHEKGVGLIEENEVYANTLAGVWI-T-TGSAPVLRRNRIHSG 87 (137)
Q Consensus 21 ~GI~v~-~~a~~~i~~n~I~~~~------~~GI~v~~~~~~~i~~n~I~~n~~~Gv~v-~-~~a~~~i~~n~I~~~ 87 (137)
.|+.|. ...+..|++-+|++.. ..+|.+.+.....|.+|+++.....-+.. . .....+|.+|.|.+.
T Consensus 124 ~gl~i~~~a~NVIIrnl~i~~~~~~~~~~~DaI~i~~s~nvwIDHcs~s~~~d~~~~~~~~~s~~vTISnn~f~~~ 199 (359)
T 1qcx_A 124 KGLRVVSGAKNVIIQNIAVTDINPKYVWGGDAITVDDSDLVWIDHVTTARIGRQHIVLGTSADNRVTISYSLIDGR 199 (359)
T ss_dssp CCEEEETTCCCEEEESCEEEEECTTEETSCCSEEEESCCCEEEESCEEEEESSCSEEECSSCCEEEEEESCEEECB
T ss_pred ceEEEecCCCCEEEeCcEEEecCCcccccCceeEecCCceEEEEeeEeeccCcCceeecccccccEEEECcEecCC
Confidence 467776 5567777888888642 36788776666678888887764433321 2 344677888888753
No 39
>1pxz_A Major pollen allergen JUN A 1; parallel beta-helix, cedar pollen; 1.70A {Juniperus ashei} SCOP: b.80.1.1
Probab=96.55 E-value=0.051 Score=42.64 Aligned_cols=112 Identities=13% Similarity=0.084 Sum_probs=77.9
Q ss_pred ccCCEEEecCCCcEEeccEEEcCCCCcEE-EE-eCceeEEEeeEEEeCCcCcEEEccC--------CccEEEeeEE-EcC
Q psy683 19 ALAGIQIRTSSDPIVRHNKIHHGQHGGVY-VH-EKGVGLIEENEVYANTLAGVWITTG--------SAPVLRRNRI-HSG 87 (137)
Q Consensus 19 ~~~GI~v~~~a~~~i~~n~I~~~~~~GI~-v~-~~~~~~i~~n~I~~n~~~Gv~v~~~--------a~~~i~~n~I-~~~ 87 (137)
...||.+....+.-|.+|++..+. .|++ +. .....+|.+|.|.+. ..++.+... -+.++.+|.+ ...
T Consensus 149 ~~DaI~i~~s~nVwIDHcs~s~~~-Dg~id~~~~s~~vTISnn~f~~H-~k~~l~G~sd~~~~d~~~~vT~~~N~f~~~~ 226 (346)
T 1pxz_A 149 DGDAITMRNVTNAWIDHNSLSDCS-DGLIDVTLGSTGITISNNHFFNH-HKVMLLGHDDTYDDDKSMKVTVAFNQFGPNA 226 (346)
T ss_dssp CCCSEEEESCEEEEEESCEEECCS-SEEEEEESSCEEEEEESCEEESE-EEEEEESCCSSCGGGGGCEEEEESCEECSSE
T ss_pred CCCEEEEecCceEEEEeeEEecCC-CCcEeeccCcceEEEEeeEEecC-CceeEECCCCccccCCceEEEEEeeEEeCCc
Confidence 357888887778889999999876 6764 53 444567888888764 345656432 2567788877 333
Q ss_pred CcccEEEEeCCeeEEEccEEEccccCcEEEecCCCeEEeceEEecC
Q psy683 88 KQVGVYFYDNGHGKLEDNDIFNHLYSGVQISNETTATLDACGLRRS 133 (137)
Q Consensus 88 ~~~GI~v~~~~~g~ie~n~I~~n~~~Gi~v~~~a~p~l~~n~I~~~ 133 (137)
..-.-.+ ..+..-+.+|.++++...++.....+...+++|.+..+
T Consensus 227 ~~R~Pr~-r~g~~hv~NN~~~~~~~~~i~~~~~~~i~~egN~F~~~ 271 (346)
T 1pxz_A 227 GQRMPRA-RYGLVHVANNNYDPWNIYAIGGSSNPTILSEGNSFTAP 271 (346)
T ss_dssp EECTTEE-ESSEEEEESCEECCCSSCSEEEESCCEEEEESCEEECC
T ss_pred cccCccE-ecceEEEEeeEEEcccceEEeccCCceEEEECCEEECC
Confidence 3222112 24677788999888887888888888888899988765
No 40
>1idk_A Pectin lyase A; signal, glycoprotein, multigene family; 1.93A {Aspergillus niger} SCOP: b.80.1.2 PDB: 1idj_A
Probab=96.48 E-value=0.011 Score=46.59 Aligned_cols=34 Identities=15% Similarity=-0.149 Sum_probs=17.6
Q ss_pred cEEEeeEEEcCCcccEEEEeCCeeEEEccEEEcc
Q psy683 77 PVLRRNRIHSGKQVGVYFYDNGHGKLEDNDIFNH 110 (137)
Q Consensus 77 ~~i~~n~I~~~~~~GI~v~~~~~g~ie~n~I~~n 110 (137)
..+.+|.+++....|+.+...+..++|+|.+...
T Consensus 246 ~hv~NN~~~n~~~~~i~~~~~~~i~~e~N~F~~~ 279 (359)
T 1idk_A 246 LHAVNNYWYDISGHAFEIGEGGYVLAEGNVFQNV 279 (359)
T ss_dssp EEEESCEEEEEEEEEEEECTTCEEEEESCEEEEE
T ss_pred EEEECCEEecccceEEeccCCcEEEEEccEEECC
Confidence 4444554444445555555555555555555543
No 41
>3zsc_A Pectate trisaccharide-lyase; hydrolase; HET: ADA AQA; 1.94A {Thermotoga maritima}
Probab=96.47 E-value=0.09 Score=41.21 Aligned_cols=36 Identities=14% Similarity=-0.127 Sum_probs=22.3
Q ss_pred cEEEeeEEEc----------CCcccEEEEeCCeeEEEccEEEcccc
Q psy683 77 PVLRRNRIHS----------GKQVGVYFYDNGHGKLEDNDIFNHLY 112 (137)
Q Consensus 77 ~~i~~n~I~~----------~~~~GI~v~~~~~g~ie~n~I~~n~~ 112 (137)
..+.+|.+++ ...+||....+++.++|+|.+.....
T Consensus 206 ~Hv~NN~~~n~~~~~~~~~~~~~yai~~~~~a~i~~E~N~F~~~~~ 251 (340)
T 3zsc_A 206 AHVFNNFYSMGLRTGVSGNVFPIYGVASAMGAKVHVEGNYFMGYGA 251 (340)
T ss_dssp EEEESCEEECCCCCSCSSCCSCCEEEEEETTCEEEEESCEEECSCH
T ss_pred EEEEccEEECCccccccccceeeeeEecCCCCEEEEECcEEECCCc
Confidence 3444666665 44557777777777777777665443
No 42
>1qcx_A Pectin lyase B; beta-helix protein, plant cell WALL; 1.70A {Aspergillus niger} SCOP: b.80.1.2
Probab=96.43 E-value=0.033 Score=43.94 Aligned_cols=112 Identities=11% Similarity=-0.006 Sum_probs=54.4
Q ss_pred CCEEEecCCCcEEeccEEEcCCCCcEEE-E-eCceeEEEeeEEEeCC----------cCcEEEcc-CCccEEEeeEEEcC
Q psy683 21 AGIQIRTSSDPIVRHNKIHHGQHGGVYV-H-EKGVGLIEENEVYANT----------LAGVWITT-GSAPVLRRNRIHSG 87 (137)
Q Consensus 21 ~GI~v~~~a~~~i~~n~I~~~~~~GI~v-~-~~~~~~i~~n~I~~n~----------~~Gv~v~~-~a~~~i~~n~I~~~ 87 (137)
.+|.+....+.-|.+|++......-+.. . .....+|.+|.|.+.. ..+..+.. ....++.+|.+.++
T Consensus 154 DaI~i~~s~nvwIDHcs~s~~~d~~~~~~~~~s~~vTISnn~f~~~~~~s~~~~G~H~~~~~l~G~sd~vT~~~N~f~~~ 233 (359)
T 1qcx_A 154 DAITVDDSDLVWIDHVTTARIGRQHIVLGTSADNRVTISYSLIDGRSDYSATCNGHHYWGVYLDGSNDMVTLKGNYFYNL 233 (359)
T ss_dssp CSEEEESCCCEEEESCEEEEESSCSEEECSSCCEEEEEESCEEECBCSSBTTSSSBBSCCEEECCSSEEEEEESCEEESB
T ss_pred ceeEecCCceEEEEeeEeeccCcCceeecccccccEEEECcEecCCccccccCcccccceeEEecCCCCeehcccEeccC
Confidence 5666665555566666666554222211 1 2234456666665421 12333322 23455666655544
Q ss_pred CcccEEEEeCCeeEEEccEEEccccCcEEEecCCCeEEeceEEec
Q psy683 88 KQVGVYFYDNGHGKLEDNDIFNHLYSGVQISNETTATLDACGLRR 132 (137)
Q Consensus 88 ~~~GI~v~~~~~g~ie~n~I~~n~~~Gi~v~~~a~p~l~~n~I~~ 132 (137)
..--=.+...+..-+.+|.+++....++.+...+...+++|.+..
T Consensus 234 ~~R~Pr~r~~~~~hv~NN~~~n~~~~a~~~~~~~~i~~e~N~F~~ 278 (359)
T 1qcx_A 234 SGRMPKVQGNTLLHAVNNLFHNFDGHAFEIGTGGYVLAEGNVFQD 278 (359)
T ss_dssp CSCTTEECSSEEEEEESCEEEEEEEEEEEECTTEEEEEESCEEEE
T ss_pred cccCceecCCceEEEEccEEECccCeEEecCCCceEEEEeeEEEC
Confidence 322222222223445566666555556666666666666665543
No 43
>3uw0_A Pectinesterase; right-handed beta-helix, carbohydrate esterase, hydrolase; 3.50A {Yersinia enterocolitica subsp}
Probab=96.32 E-value=0.17 Score=39.89 Aligned_cols=106 Identities=9% Similarity=0.130 Sum_probs=72.3
Q ss_pred EEEecCCCcEEeccEEEcCC--------------------CCcEEEE-eCceeEEEeeEEEeCCcCcEEEccCCccEEEe
Q psy683 23 IQIRTSSDPIVRHNKIHHGQ--------------------HGGVYVH-EKGVGLIEENEVYANTLAGVWITTGSAPVLRR 81 (137)
Q Consensus 23 I~v~~~a~~~i~~n~I~~~~--------------------~~GI~v~-~~~~~~i~~n~I~~n~~~Gv~v~~~a~~~i~~ 81 (137)
+.| .....++++.+|.+.. ..++.+. ...+..+.+|++.+.. +.+++....+-.+++
T Consensus 117 v~V-~a~~f~a~nitf~Nt~~~~~~~~~~~~~p~~~~~~QAvAl~v~~~~D~~~f~~C~f~G~Q-DTLy~~~~gr~yf~~ 194 (364)
T 3uw0_A 117 VLV-NAPNFTAENLTIRNDFDFPANKKKADTDPTKLKDTQAVALLLAENSDKARFKAVKLEGYQ-DTLYSKTGSRSYFSD 194 (364)
T ss_dssp EEE-CSTTCEEEEEEEEECCCHHHHHHSCTTCTTCCSCCCCCSEEECTTCEEEEEEEEEEECSB-SCEEECTTCEEEEES
T ss_pred EEE-ECCCEEEEeeeeEcCCcccccccccccccccccCCccEEEEEecCCCeEEEEeeEEEecc-cceEeCCCCCEEEEc
Confidence 344 4566778888887653 1355554 2456789999999884 688887677888999
Q ss_pred eEEEcCCcccEEEEeCCeeEEEccEEEccc------cCcEEEecCCC------eEEeceEEecC
Q psy683 82 NRIHSGKQVGVYFYDNGHGKLEDNDIFNHL------YSGVQISNETT------ATLDACGLRRS 133 (137)
Q Consensus 82 n~I~~~~~~GI~v~~~~~g~ie~n~I~~n~------~~Gi~v~~~a~------p~l~~n~I~~~ 133 (137)
|.|...-+ ||.+.+..+|++|+|+-.. ..|.....+-. -++.+|+|...
T Consensus 195 c~I~GtvD---FIFG~a~a~f~~c~i~~~~~~~~~~~~g~ITA~~~~~~~~~G~vf~~c~i~~~ 255 (364)
T 3uw0_A 195 CEISGHVD---FIFGSGITVFDNCNIVARDRSDIEPPYGYITAPSTLTTSPYGLIFINSRLTKE 255 (364)
T ss_dssp CEEEESEE---EEEESSEEEEESCEEEECCCSSCSSCCEEEEEECCCTTCSCCEEEESCEEEEC
T ss_pred CEEEcCCC---EECCcceEEEEeeEEEEeccCcccCCccEEEeCCcCCCCCcEEEEEeeEEecC
Confidence 99987654 6667899999999998642 12333332221 27888988753
No 44
>1pxz_A Major pollen allergen JUN A 1; parallel beta-helix, cedar pollen; 1.70A {Juniperus ashei} SCOP: b.80.1.1
Probab=96.14 E-value=0.017 Score=45.32 Aligned_cols=100 Identities=8% Similarity=-0.093 Sum_probs=73.2
Q ss_pred EEEeeEEEcCccCCE-EEe-cCCCcEEeccEEEcCCCCcEEEEeC--------ceeEEEeeEE-EeCCcCcEEEccCCcc
Q psy683 9 QVLMMVHCGNALAGI-QIR-TSSDPIVRHNKIHHGQHGGVYVHEK--------GVGLIEENEV-YANTLAGVWITTGSAP 77 (137)
Q Consensus 9 ~i~~c~I~~~~~~GI-~v~-~~a~~~i~~n~I~~~~~~GI~v~~~--------~~~~i~~n~I-~~n~~~Gv~v~~~a~~ 77 (137)
.|.+|+|+... .|+ .+. .....+|++|.+++.. .++++..+ -+.++.+|.+ .++..-.-.++ ....
T Consensus 162 wIDHcs~s~~~-Dg~id~~~~s~~vTISnn~f~~H~-k~~l~G~sd~~~~d~~~~vT~~~N~f~~~~~~R~Pr~r-~g~~ 238 (346)
T 1pxz_A 162 WIDHNSLSDCS-DGLIDVTLGSTGITISNNHFFNHH-KVMLLGHDDTYDDDKSMKVTVAFNQFGPNAGQRMPRAR-YGLV 238 (346)
T ss_dssp EEESCEEECCS-SEEEEEESSCEEEEEESCEEESEE-EEEEESCCSSCGGGGGCEEEEESCEECSSEEECTTEEE-SSEE
T ss_pred EEEeeEEecCC-CCcEeeccCcceEEEEeeEEecCC-ceeEECCCCccccCCceEEEEEeeEEeCCccccCccEe-cceE
Confidence 58999999976 465 464 5558999999999643 56655322 2677888887 44433222222 4678
Q ss_pred EEEeeEEEcCCcccEEEEeCCeeEEEccEEEccc
Q psy683 78 VLRRNRIHSGKQVGVYFYDNGHGKLEDNDIFNHL 111 (137)
Q Consensus 78 ~i~~n~I~~~~~~GI~v~~~~~g~ie~n~I~~n~ 111 (137)
.+.+|.++.....++.....++.++|+|.+....
T Consensus 239 hv~NN~~~~~~~~~i~~~~~~~i~~egN~F~~~~ 272 (346)
T 1pxz_A 239 HVANNNYDPWNIYAIGGSSNPTILSEGNSFTAPS 272 (346)
T ss_dssp EEESCEECCCSSCSEEEESCCEEEEESCEEECCS
T ss_pred EEEeeEEEcccceEEeccCCceEEEECCEEECCC
Confidence 8999999988889999999999999999998754
No 45
>3zsc_A Pectate trisaccharide-lyase; hydrolase; HET: ADA AQA; 1.94A {Thermotoga maritima}
Probab=96.14 E-value=0.3 Score=38.22 Aligned_cols=68 Identities=13% Similarity=0.110 Sum_probs=48.2
Q ss_pred CCEEEecCCCcEEeccEEEcC-----------CCCcEEEEeCceeEEEeeEEEeCCcCcEEEcc-CCccEEEeeEEEcCC
Q psy683 21 AGIQIRTSSDPIVRHNKIHHG-----------QHGGVYVHEKGVGLIEENEVYANTLAGVWITT-GSAPVLRRNRIHSGK 88 (137)
Q Consensus 21 ~GI~v~~~a~~~i~~n~I~~~-----------~~~GI~v~~~~~~~i~~n~I~~n~~~Gv~v~~-~a~~~i~~n~I~~~~ 88 (137)
.||.|....+..|++.+|++. ...+|.+.+.....|.+|+++.....-+.+.. ....+|.+|.+++..
T Consensus 83 ~Gi~I~~a~NVIIrnl~i~~~~~~~~~~~~~~~~DaI~i~~s~nVWIDHcs~s~~~Dg~idi~~~s~~vTISnn~f~~h~ 162 (340)
T 3zsc_A 83 GGLVIKDAQNVIIRNIHFEGFYMEDDPRGKKYDFDYINVENSHHIWIDHITFVNGNDGAVDIKKYSNYITVSWNKFVDHD 162 (340)
T ss_dssp EEEEEESCEEEEEESCEEECCCCTTCTTSCSSCCCSEEEESCEEEEEESCEEESCSSCSEEEETTCEEEEEESCEEESCS
T ss_pred CceEEEcCceEEEeCeEEECCccccCccCCcCCCCeEEEecCCcEEEEeeeeccCCccceEEecCCceEEEECcEeccCc
Confidence 477776666788888888875 34678887777777888888876544466654 456678888887654
No 46
>3eqn_A Glucan 1,3-beta-glucosidase; tandem beta-helix domains, glycosidase, hydrolase; HET: NAG BMA; 1.70A {Phanerochaete chrysosporium} PDB: 3eqo_A*
Probab=95.99 E-value=0.16 Score=43.71 Aligned_cols=104 Identities=14% Similarity=0.097 Sum_probs=64.2
Q ss_pred EEEeeEEEc-----CccCCEEEecCCCcEEeccEEEcCCCCcEEEEeCceeEEEeeEEEeCCcCcEEEccCCccEEEeeE
Q psy683 9 QVLMMVHCG-----NALAGIQIRTSSDPIVRHNKIHHGQHGGVYVHEKGVGLIEENEVYANTLAGVWITTGSAPVLRRNR 83 (137)
Q Consensus 9 ~i~~c~I~~-----~~~~GI~v~~~a~~~i~~n~I~~~~~~GI~v~~~~~~~i~~n~I~~n~~~Gv~v~~~a~~~i~~n~ 83 (137)
.|.+|+|.- +...||++..++...+.+++|.+.. .|+++ +.-+-++++-.+.++. .+|.+.-+-.-++.+..
T Consensus 185 sL~Nv~i~m~~~sg~~~~GI~~e~GSgg~i~Dl~f~GG~-~G~~~-gnQQfT~rnltF~~~~-taI~~~w~wgwt~~~~~ 261 (758)
T 3eqn_A 185 SLINIVFQMSTAAGNQHQGIFMENGSGGFLGDLVFNGGN-IGATF-GNQQFTVRNLTFNNAN-TAINAIWNWGWTFQRIT 261 (758)
T ss_dssp EEEEEEEECCCSTTCCEEEEEECSCCCCEEEEEEEESCS-EEEEE-ECSCCEEEEEEEESCS-EEEEEEEBSCEEEEEEE
T ss_pred EEEEEEEEecCCCCCcceeEEecCCCceEEEeeEEeCCc-eEEEc-CCcceEEeccEEeChH-HHHhhhcCceEEEEEeE
Confidence 577777776 4466788877777788888887654 78877 3345566666666554 36666655666666666
Q ss_pred EEcCCcccEEEEeCC----------eeEEEccEEEccccCcEEE
Q psy683 84 IHSGKQVGVYFYDNG----------HGKLEDNDIFNHLYSGVQI 117 (137)
Q Consensus 84 I~~~~~~GI~v~~~~----------~g~ie~n~I~~n~~~Gi~v 117 (137)
|.++. .||-+..++ .-++.+.++.+.. .+|..
T Consensus 262 i~nc~-vGi~~~~g~~~~~~~q~vGsv~l~Ds~~~n~~-~~i~t 303 (758)
T 3eqn_A 262 INNCQ-VGFDLTQGGTSNTGAQGVGAEAIIDAVVTNTQ-TFVRW 303 (758)
T ss_dssp EESCS-EEEEECCCCSSTTSCCCBCEEEEEEEEEESCS-EEEEE
T ss_pred EECCC-ccEEEcCCCCCcccCcceeeEEEEEeeEEccc-ceEEe
Confidence 66653 566665532 2345555555444 34443
No 47
>2qy1_A Pectate lyase II; GAG lyase; 1.90A {Xanthomonas campestris PV} PDB: 2qxz_A 2qx3_A
Probab=95.70 E-value=0.051 Score=42.30 Aligned_cols=101 Identities=14% Similarity=-0.026 Sum_probs=60.6
Q ss_pred EEEEeeEEEcCc-----------cCCEEEecC-CCcEEeccEEEcCCCCcEEEEeC---------ceeEEEeeEEEeCCc
Q psy683 8 AQVLMMVHCGNA-----------LAGIQIRTS-SDPIVRHNKIHHGQHGGVYVHEK---------GVGLIEENEVYANTL 66 (137)
Q Consensus 8 g~i~~c~I~~~~-----------~~GI~v~~~-a~~~i~~n~I~~~~~~GI~v~~~---------~~~~i~~n~I~~n~~ 66 (137)
-.|.+|+++... .-.+.+..+ ...+|++|.+++.. .+.++ +. .+.++.+|-+.+...
T Consensus 129 VWIDH~s~s~~~~~~~~~~~~~~Dg~idi~~~s~~VTISnn~f~~h~-k~~L~-G~sd~~~~~~~~~vT~h~N~f~~~~~ 206 (330)
T 2qy1_A 129 IWVDHNTVFASLTKCSGAGDASFDGGIDMKKGVHHVTVSYNYVYNYQ-KVALN-GYSDSDTKNSAARTTYHHNRFENVES 206 (330)
T ss_dssp EEEESCEEECCCCCCTTCTTCSSCCSEEEESSCEEEEEESCEEEEEE-ECCEE-SSSTTCGGGGGCEEEEESCEEEEEEE
T ss_pred EEEEeEEEEccccccccCCcceeecccccccCcceEEEEcceeccCC-eEEEE-CCCCccccCCCceEEEECcEEcCCCC
Confidence 366777776432 334555533 36777777777543 23323 33 256677776655432
Q ss_pred CcEEEccCCccEEEeeEEEcCCcccEEEEeCCeeEEEccEEEccc
Q psy683 67 AGVWITTGSAPVLRRNRIHSGKQVGVYFYDNGHGKLEDNDIFNHL 111 (137)
Q Consensus 67 ~Gv~v~~~a~~~i~~n~I~~~~~~GI~v~~~~~g~ie~n~I~~n~ 111 (137)
-.=.++ .....+.+|.+++....|+....+++.++|+|.+..-.
T Consensus 207 R~Pr~r-~G~~hv~NN~~~n~~~~~i~~~~~~~i~~e~N~F~~~~ 250 (330)
T 2qy1_A 207 RVPLQR-FGLSHIYNNYFNNVTTSGINVRMGGIAKIESNYFENIK 250 (330)
T ss_dssp CTTEEE-SSEEEEESCEEEEECSCSEEEETTCEEEEESCEEEEEE
T ss_pred CCCcee-cceEEEEeeEEEcccceEeccCCCcEEEEEccEEECCC
Confidence 222233 23456777777777778888888888888888876654
No 48
>2nsp_A Pectinesterase A; michaelis complex, hydrolase; HET: M8C ADA; 1.70A {Erwinia chrysanthemi} PDB: 2nst_A* 2nt6_A* 2nt9_A* 2ntp_A* 2ntb_A* 2ntq_A* 1qjv_A
Probab=95.53 E-value=0.42 Score=37.35 Aligned_cols=55 Identities=11% Similarity=0.186 Sum_probs=39.5
Q ss_pred ceEEEEeeEEEcCccCCEEEecCCCcEEeccEEEcCCCCcEEEEeCceeEEEeeEEEeCC
Q psy683 6 GKAQVLMMVHCGNALAGIQIRTSSDPIVRHNKIHHGQHGGVYVHEKGVGLIEENEVYANT 65 (137)
Q Consensus 6 g~g~i~~c~I~~~~~~GI~v~~~a~~~i~~n~I~~~~~~GI~v~~~~~~~i~~n~I~~n~ 65 (137)
-+..|.+|.|.+.. ..+++. .++..+++|.|.++- =+|++.+..++++|+|+...
T Consensus 140 d~~~f~~c~f~G~Q-DTLy~~-~gr~~~~~c~I~G~v---DFIFG~a~a~f~~c~i~~~~ 194 (342)
T 2nsp_A 140 DRAYFKDVSLVGYQ-ATLYVS-GGRSFFSDCRISGTV---DFIFGDGTALFNNCDLVSRY 194 (342)
T ss_dssp BSEEEEEEEEECST-TCEEEC-SSEEEEESCEEEESE---EEEEESSEEEEESCEEEECC
T ss_pred CcEEEEeeEEeccc-ceEEEC-CCCEEEEcCEEEece---EEEeCCceEEEecCEEEEec
Confidence 34567888888864 467775 557788888888654 36778888888888887653
No 49
>3uw0_A Pectinesterase; right-handed beta-helix, carbohydrate esterase, hydrolase; 3.50A {Yersinia enterocolitica subsp}
Probab=95.38 E-value=0.57 Score=36.95 Aligned_cols=109 Identities=12% Similarity=0.159 Sum_probs=71.2
Q ss_pred cceEEEEeeEEEcCccCCEEEecCCCcEEeccEEEcCCCCcEEEEeCceeEEEeeEEEeCC------cCcEEEccCC---
Q psy683 5 KGKAQVLMMVHCGNALAGIQIRTSSDPIVRHNKIHHGQHGGVYVHEKGVGLIEENEVYANT------LAGVWITTGS--- 75 (137)
Q Consensus 5 ~g~g~i~~c~I~~~~~~GI~v~~~a~~~i~~n~I~~~~~~GI~v~~~~~~~i~~n~I~~n~------~~Gv~v~~~a--- 75 (137)
.-+..|.+|.|.+. ...+++....+..+++|.|.+.- =||++.+..++++|+|+... ..|.....+.
T Consensus 165 ~D~~~f~~C~f~G~-QDTLy~~~~gr~yf~~c~I~Gtv---DFIFG~a~a~f~~c~i~~~~~~~~~~~~g~ITA~~~~~~ 240 (364)
T 3uw0_A 165 SDKARFKAVKLEGY-QDTLYSKTGSRSYFSDCEISGHV---DFIFGSGITVFDNCNIVARDRSDIEPPYGYITAPSTLTT 240 (364)
T ss_dssp CEEEEEEEEEEECS-BSCEEECTTCEEEEESCEEEESE---EEEEESSEEEEESCEEEECCCSSCSSCCEEEEEECCCTT
T ss_pred CCeEEEEeeEEEec-ccceEeCCCCCEEEEcCEEEcCC---CEECCcceEEEEeeEEEEeccCcccCCccEEEeCCcCCC
Confidence 34568889999986 47898875778899999998644 37888999999999998652 1233222221
Q ss_pred ---ccEEEeeEEEcCCc--c-cEEEEeC------------------CeeEEEccEEEccccCcEEEe
Q psy683 76 ---APVLRRNRIHSGKQ--V-GVYFYDN------------------GHGKLEDNDIFNHLYSGVQIS 118 (137)
Q Consensus 76 ---~~~i~~n~I~~~~~--~-GI~v~~~------------------~~g~ie~n~I~~n~~~Gi~v~ 118 (137)
--++.+|+|....+ . -+|+... ++.++.+|.+.+.- .|+.-+
T Consensus 241 ~~~G~vf~~c~i~~~~~~~~~~~yLGRPW~~~s~~~~g~yadp~a~~rvVf~~s~m~~~I-~GW~~w 306 (364)
T 3uw0_A 241 SPYGLIFINSRLTKEPGVPANSFALGRPWHPTTTFADGRYADPAAIGQSVFINTTMDDHI-YGWDKM 306 (364)
T ss_dssp CSCCEEEESCEEEECTTCCSSCEEEECCCCCEEECSSCEEECTTCCCEEEEESCEECTTE-EECCCE
T ss_pred CCcEEEEEeeEEecCCCCccccEEeccccccccccccccccccCccceEEEEeCCCCcee-eccccc
Confidence 13578888875432 1 2333311 36777788777765 555433
No 50
>2nsp_A Pectinesterase A; michaelis complex, hydrolase; HET: M8C ADA; 1.70A {Erwinia chrysanthemi} PDB: 2nst_A* 2nt6_A* 2nt9_A* 2ntp_A* 2ntb_A* 2ntq_A* 1qjv_A
Probab=95.37 E-value=0.3 Score=38.17 Aligned_cols=106 Identities=13% Similarity=0.258 Sum_probs=70.7
Q ss_pred CEEEecCCCcEEeccEEEcCC--------------------CCcEEEE-eCceeEEEeeEEEeCCcCcEEEccCCccEEE
Q psy683 22 GIQIRTSSDPIVRHNKIHHGQ--------------------HGGVYVH-EKGVGLIEENEVYANTLAGVWITTGSAPVLR 80 (137)
Q Consensus 22 GI~v~~~a~~~i~~n~I~~~~--------------------~~GI~v~-~~~~~~i~~n~I~~n~~~Gv~v~~~a~~~i~ 80 (137)
-+.| .....++++-+|.+.. ..++++. ...+..|.+|+|.+... .|++. .++-.++
T Consensus 90 tv~v-~a~~f~a~nlt~~Nt~~~~~~~~~~~~~~~~~~~~QAvAl~v~v~~d~~~f~~c~f~G~QD-TLy~~-~gr~~~~ 166 (342)
T 2nsp_A 90 TITI-SAKDFSAQSLTIRNDFDFPANQAKSDSDSSKIKDTQAVALYVTKSGDRAYFKDVSLVGYQA-TLYVS-GGRSFFS 166 (342)
T ss_dssp SEEE-CSBSCEEEEEEEEECCCHHHHHHSCTTCTTCCSCCCCCSEEECTTCBSEEEEEEEEECSTT-CEEEC-SSEEEEE
T ss_pred EEEE-ECCCEEEEeeEEEccccccccccccccCCccccCCceEEEEEeeccCcEEEEeeEEecccc-eEEEC-CCCEEEE
Confidence 3445 4556778888887643 1255433 34457899999998754 68876 4577889
Q ss_pred eeEEEcCCcccEEEEeCCeeEEEccEEEccccC--------cEEEecCC------CeEEeceEEecC
Q psy683 81 RNRIHSGKQVGVYFYDNGHGKLEDNDIFNHLYS--------GVQISNET------TATLDACGLRRS 133 (137)
Q Consensus 81 ~n~I~~~~~~GI~v~~~~~g~ie~n~I~~n~~~--------Gi~v~~~a------~p~l~~n~I~~~ 133 (137)
+|.|..+-+ ||.+.+..+|++|+|+-.... |.....+. .-++.+|+|...
T Consensus 167 ~c~I~G~vD---FIFG~a~a~f~~c~i~~~~~~~~~~~~~~g~ItA~~~~~~~~~G~vf~~c~i~~~ 230 (342)
T 2nsp_A 167 DCRISGTVD---FIFGDGTALFNNCDLVSRYRADVKSGNVSGYLTAPSTNINQKYGLVITNSRVIRE 230 (342)
T ss_dssp SCEEEESEE---EEEESSEEEEESCEEEECCCTTSCTTSCCEEEEEECCBTTCSCCEEEESCEEEES
T ss_pred cCEEEeceE---EEeCCceEEEecCEEEEecCcccccccCceEEEccCCCCCCCCEEEEEcCEEecC
Confidence 999987754 777889999999999865321 33332221 128888988754
No 51
>1ogo_X Dextranase; hydrolase, dextran degradation, glycosidase; HET: BGC GLC; 1.65A {Penicillium minioluteum} SCOP: b.133.1.1 b.80.1.10 PDB: 1ogm_X*
Probab=95.08 E-value=0.18 Score=42.11 Aligned_cols=100 Identities=9% Similarity=-0.023 Sum_probs=75.4
Q ss_pred EEEEeeEEEcCccCCEEEecCCCc--EEeccEEEcC---CCCcEEEEeCceeEEEeeEEEeCCcCcEEEccCCccEEEee
Q psy683 8 AQVLMMVHCGNALAGIQIRTSSDP--IVRHNKIHHG---QHGGVYVHEKGVGLIEENEVYANTLAGVWITTGSAPVLRRN 82 (137)
Q Consensus 8 g~i~~c~I~~~~~~GI~v~~~a~~--~i~~n~I~~~---~~~GI~v~~~~~~~i~~n~I~~n~~~Gv~v~~~a~~~i~~n 82 (137)
-+|++-.|.+.....+.+..+.+. +|++.++... ...||-+. ...+|++|.|... .+.|.+.. .+.+|++|
T Consensus 335 V~I~Giti~NSp~w~i~~~~c~nV~~~I~nv~i~~~~~~nTDGIDi~--~NV~I~nc~I~~g-DDcIaIks-~NI~I~nc 410 (574)
T 1ogo_X 335 WYCVGPTINAPPFNTMDFNGNSGISSQISDYKQVGAFFFQTDGPEIY--PNSVVHDVFWHVN-DDAIKIYY-SGASVSRA 410 (574)
T ss_dssp EEEESCEEECCSSCSEEECSSSCEEEEEEEEEEECCCSTTCCCCBCC--TTCEEEEEEEEES-SCSEECCS-TTCEEEEE
T ss_pred EEEECeEEECCCCcEEeecCCCChhhEEEeeEeeCCCCCCCccCccc--CCEEEEeeEEECC-CCEEEECC-ccEEEEeE
Confidence 367788888888888888877888 8999988742 25688876 6778888888765 45888875 88999999
Q ss_pred EEEcCCccc-EEEEeCC----eeEEEccEEEccc
Q psy683 83 RIHSGKQVG-VYFYDNG----HGKLEDNDIFNHL 111 (137)
Q Consensus 83 ~I~~~~~~G-I~v~~~~----~g~ie~n~I~~n~ 111 (137)
.++.+.+.| |.+.... .-++++|.+.+..
T Consensus 411 ~i~~g~g~g~IsIGS~~g~V~NV~v~N~~i~~~~ 444 (574)
T 1ogo_X 411 TIWKCHNDPIIQMGWTSRDISGVTIDTLNVIHTR 444 (574)
T ss_dssp EEEECSSSCSEECCSSCCCEEEEEEEEEEEEECC
T ss_pred EEECCCCCceEEEcCCCCcEEEEEEEeEEEECCc
Confidence 999887666 7765322 2368888887765
No 52
>1dab_A P.69 pertactin; pertussis beta helix, cell adhesion; 2.50A {Bordetella pertussis} SCOP: b.80.1.7 PDB: 2iou_G
Probab=95.01 E-value=0.17 Score=42.01 Aligned_cols=77 Identities=18% Similarity=0.185 Sum_probs=42.5
Q ss_pred EEEEeeEEEcCccCCEEEecCCCcEEeccEEE--cCCCCcEEE--------------------------------EeCce
Q psy683 8 AQVLMMVHCGNALAGIQIRTSSDPIVRHNKIH--HGQHGGVYV--------------------------------HEKGV 53 (137)
Q Consensus 8 g~i~~c~I~~~~~~GI~v~~~a~~~i~~n~I~--~~~~~GI~v--------------------------------~~~~~ 53 (137)
-.+.+..+. ...|+.++.+++.++.+..|. +....|++. .+.+.
T Consensus 116 ~~~~d~~~~--g~~gv~~~~G~~~t~~~t~I~T~G~~a~Gl~a~~~~~~~~~~v~a~d~~vt~~~~~~~~~~~~~~~~~~ 193 (539)
T 1dab_A 116 ASIADSTLQ--GAGGVQIERGANVTVQRSAIVDGGLHIGALQSLQPEDLPPSRVVLRDTNVTAVPASGAPAAVSVLGASE 193 (539)
T ss_dssp EEEESCEEE--STTEEEEETTCEEEEESCEECSBCEEEECSSCCSCCCSCCEEEEEESCEEEECTTSCCSEEEEEESSEE
T ss_pred EEEcCcEEE--cccceEeecCcEEEEeCCEEEecCCCceeEEeccCCCCCcceEEeecceEEecccCCccceeeeccccc
Confidence 344555555 346666666666666666663 222234432 23333
Q ss_pred eEEEeeEEEeCCcCcEEEccCCccEEEeeEEEc
Q psy683 54 GLIEENEVYANTLAGVWITTGSAPVLRRNRIHS 86 (137)
Q Consensus 54 ~~i~~n~I~~n~~~Gv~v~~~a~~~i~~n~I~~ 86 (137)
..+...++++....|++...++...|.+..|.-
T Consensus 194 ~~~~~~~t~G~~s~G~~A~~Gg~i~lt~~ti~T 226 (539)
T 1dab_A 194 LTLDGGHITGGRAAGVAAMQGAVVHLQRATIRR 226 (539)
T ss_dssp EEEEEEEEEECSSEEEEEESSCEEEEEEEEEES
T ss_pred eecccceeecccceeeEEccCcEEEEeccEEEe
Confidence 345555566666666666666666666666655
No 53
>1ogo_X Dextranase; hydrolase, dextran degradation, glycosidase; HET: BGC GLC; 1.65A {Penicillium minioluteum} SCOP: b.133.1.1 b.80.1.10 PDB: 1ogm_X*
Probab=94.78 E-value=0.12 Score=43.18 Aligned_cols=103 Identities=11% Similarity=0.058 Sum_probs=79.3
Q ss_pred cCCCcEEeccEEEcCCCCcEEEEeCcee--EEEeeEEEeC---CcCcEEEccCCccEEEeeEEEcCCcccEEEEeCCeeE
Q psy683 27 TSSDPIVRHNKIHHGQHGGVYVHEKGVG--LIEENEVYAN---TLAGVWITTGSAPVLRRNRIHSGKQVGVYFYDNGHGK 101 (137)
Q Consensus 27 ~~a~~~i~~n~I~~~~~~GI~v~~~~~~--~i~~n~I~~n---~~~Gv~v~~~a~~~i~~n~I~~~~~~GI~v~~~~~g~ 101 (137)
...+.+|++-+|.++....+.+...... +|.+..+... ..+||.+. .+.+|++|.|..+. .+|.+.. ..-+
T Consensus 331 ~c~NV~I~Giti~NSp~w~i~~~~c~nV~~~I~nv~i~~~~~~nTDGIDi~--~NV~I~nc~I~~gD-DcIaIks-~NI~ 406 (574)
T 1ogo_X 331 GGQTWYCVGPTINAPPFNTMDFNGNSGISSQISDYKQVGAFFFQTDGPEIY--PNSVVHDVFWHVND-DAIKIYY-SGAS 406 (574)
T ss_dssp SSEEEEEESCEEECCSSCSEEECSSSCEEEEEEEEEEECCCSTTCCCCBCC--TTCEEEEEEEEESS-CSEECCS-TTCE
T ss_pred CceeEEEECeEEECCCCcEEeecCCCChhhEEEeeEeeCCCCCCCccCccc--CCEEEEeeEEECCC-CEEEECC-ccEE
Confidence 5567888999999988888988777777 7888888742 26799887 88999999999985 6998776 7778
Q ss_pred EEccEEEccccCc-EEEecCC----CeEEeceEEecC
Q psy683 102 LEDNDIFNHLYSG-VQISNET----TATLDACGLRRS 133 (137)
Q Consensus 102 ie~n~I~~n~~~G-i~v~~~a----~p~l~~n~I~~~ 133 (137)
+++|.+......+ |.+.... +.++++|++.++
T Consensus 407 I~nc~i~~g~g~g~IsIGS~~g~V~NV~v~N~~i~~~ 443 (574)
T 1ogo_X 407 VSRATIWKCHNDPIIQMGWTSRDISGVTIDTLNVIHT 443 (574)
T ss_dssp EEEEEEEECSSSCSEECCSSCCCEEEEEEEEEEEEEC
T ss_pred EEeEEEECCCCCceEEEcCCCCcEEEEEEEeEEEECC
Confidence 9999998776656 7775422 236777777554
No 54
>3eqn_A Glucan 1,3-beta-glucosidase; tandem beta-helix domains, glycosidase, hydrolase; HET: NAG BMA; 1.70A {Phanerochaete chrysosporium} PDB: 3eqo_A*
Probab=94.52 E-value=1.1 Score=38.62 Aligned_cols=97 Identities=13% Similarity=0.153 Sum_probs=74.8
Q ss_pred CCEEEecCCCcEEeccEEEc-----CCCCcEEEEeCceeEEEeeEEEeCCcCcEEEccCCccEEEeeEEEcCCcccEEEE
Q psy683 21 AGIQIRTSSDPIVRHNKIHH-----GQHGGVYVHEKGVGLIEENEVYANTLAGVWITTGSAPVLRRNRIHSGKQVGVYFY 95 (137)
Q Consensus 21 ~GI~v~~~a~~~i~~n~I~~-----~~~~GI~v~~~~~~~i~~n~I~~n~~~Gv~v~~~a~~~i~~n~I~~~~~~GI~v~ 95 (137)
.+|+....-...|++++|.- +.+.||++...+.+.++++.|..- ..|+.+.. ---++++-.+..++ .+|+..
T Consensus 174 ~gIhw~vaQatsL~Nv~i~m~~~sg~~~~GI~~e~GSgg~i~Dl~f~GG-~~G~~~gn-QQfT~rnltF~~~~-taI~~~ 250 (758)
T 3eqn_A 174 TGIHWQVSQATSLINIVFQMSTAAGNQHQGIFMENGSGGFLGDLVFNGG-NIGATFGN-QQFTVRNLTFNNAN-TAINAI 250 (758)
T ss_dssp EEEECCCCSSEEEEEEEEECCCSTTCCEEEEEECSCCCCEEEEEEEESC-SEEEEEEC-SCCEEEEEEEESCS-EEEEEE
T ss_pred eEEEEEecCceEEEEEEEEecCCCCCcceeEEecCCCceEEEeeEEeCC-ceEEEcCC-cceEEeccEEeChH-HHHhhh
Confidence 45655555688999999986 346799998778889999999775 56898854 35688888888875 699998
Q ss_pred eCCeeEEEccEEEccccCcEEEecCC
Q psy683 96 DNGHGKLEDNDIFNHLYSGVQISNET 121 (137)
Q Consensus 96 ~~~~g~ie~n~I~~n~~~Gi~v~~~a 121 (137)
-+-.=++.+..|.+.. -||.+..+.
T Consensus 251 w~wgwt~~~~~i~nc~-vGi~~~~g~ 275 (758)
T 3eqn_A 251 WNWGWTFQRITINNCQ-VGFDLTQGG 275 (758)
T ss_dssp EBSCEEEEEEEEESCS-EEEEECCCC
T ss_pred cCceEEEEEeEEECCC-ccEEEcCCC
Confidence 7777788888886665 599998754
No 55
>3vmv_A Pectate lyase; polysaccharide lyase family 1, beta-helix, pectolytic, polygalacturonate; 1.54A {Bacillus} PDB: 3vmw_A*
Probab=94.46 E-value=0.29 Score=38.05 Aligned_cols=34 Identities=12% Similarity=-0.057 Sum_probs=20.5
Q ss_pred cEEEeeEEEcCCcccEEEEeCCeeEEEccEEEcc
Q psy683 77 PVLRRNRIHSGKQVGVYFYDNGHGKLEDNDIFNH 110 (137)
Q Consensus 77 ~~i~~n~I~~~~~~GI~v~~~~~g~ie~n~I~~n 110 (137)
..+.+|.+++....|+....+++.++|+|.+..-
T Consensus 216 ~Hv~NN~~~n~~~~~~~~~~~a~v~~e~N~F~~~ 249 (326)
T 3vmv_A 216 VHMFNNYFKDINDTAINSRVGARVFVENNYFDNV 249 (326)
T ss_dssp EEEESCEEEEESSCSEEEETTCEEEEESCEEEEE
T ss_pred EEEEccEEECCCceEEeecCCcEEEEEceEEECC
Confidence 4445555555555666666666666666666554
No 56
>1x0c_A Isopullulanase; glycoside hydrolase family 49, glycoprotein, hydro; HET: NAG; 1.70A {Aspergillus niger} PDB: 1wmr_A* 2z8g_A*
Probab=94.35 E-value=0.29 Score=40.62 Aligned_cols=102 Identities=8% Similarity=0.109 Sum_probs=53.6
Q ss_pred CCCcEEeccEEEcCCCCcEEEEeCc--e--eEEEeeEEEeC---CcCcEEEccCCccEEEeeEEEcCCcccEEEEeCCee
Q psy683 28 SSDPIVRHNKIHHGQHGGVYVHEKG--V--GLIEENEVYAN---TLAGVWITTGSAPVLRRNRIHSGKQVGVYFYDNGHG 100 (137)
Q Consensus 28 ~a~~~i~~n~I~~~~~~GI~v~~~~--~--~~i~~n~I~~n---~~~Gv~v~~~a~~~i~~n~I~~~~~~GI~v~~~~~g 100 (137)
..+.+|++-+|.++...-+.+.... . .+|.+..+... ..+|+.+. .+.+|++|.|..+ +.+|.+.. ..-
T Consensus 292 c~nV~I~Giti~Nsp~w~i~i~~~~~~ni~V~I~n~~i~~~~~~NTDGidi~--~nV~I~n~~i~~g-DDcIaIks-~NI 367 (549)
T 1x0c_A 292 SQTFVLNGVTVSAPPFNSMDWSGNSLDLITCRVDDYKQVGAFYGQTDGLEMY--PGTILQDVFYHTD-DDGLKMYY-SNV 367 (549)
T ss_dssp CEEEEEESCEEECCSSCSEEEECSCGGGEEEEEEEEEEECCCBTTCCCCBCC--TTCEEEEEEEEES-SCCEECCS-SSE
T ss_pred ceEEEEECcEEECCCceeEEeeccCCCCCeEEEEeeEeEcCCCCCCCccccc--CCEEEEeeEEeCC-CCEEEECC-CCE
Confidence 3345566666666655555555444 3 35666665431 13566665 5666666666665 34666554 445
Q ss_pred EEEccEEEccccCc-EEEecCC----CeEEeceEEecC
Q psy683 101 KLEDNDIFNHLYSG-VQISNET----TATLDACGLRRS 133 (137)
Q Consensus 101 ~ie~n~I~~n~~~G-i~v~~~a----~p~l~~n~I~~~ 133 (137)
++++|.+......+ |.+.... +.++++|.|.++
T Consensus 368 ~I~n~~~~~~~g~~~IsiGs~~~~V~NV~v~n~~i~~s 405 (549)
T 1x0c_A 368 TARNIVMWKESVAPVVEFGWTPRNTENVLFDNVDVIHQ 405 (549)
T ss_dssp EEEEEEEEECSSSCSEECCBSCCCEEEEEEEEEEEEEC
T ss_pred EEEeeEEEcCCCCceEEECCCCCcEEEEEEEeeEEECc
Confidence 56666666544444 5543221 224555555443
No 57
>2qy1_A Pectate lyase II; GAG lyase; 1.90A {Xanthomonas campestris PV} PDB: 2qxz_A 2qx3_A
Probab=94.29 E-value=1 Score=34.91 Aligned_cols=112 Identities=14% Similarity=0.132 Sum_probs=70.0
Q ss_pred CCEEEe-cCCCcEEeccEEEcCC----CCcEEEEe-----CceeEEEeeEEEeCC-----------cCcEEEcc-CCccE
Q psy683 21 AGIQIR-TSSDPIVRHNKIHHGQ----HGGVYVHE-----KGVGLIEENEVYANT-----------LAGVWITT-GSAPV 78 (137)
Q Consensus 21 ~GI~v~-~~a~~~i~~n~I~~~~----~~GI~v~~-----~~~~~i~~n~I~~n~-----------~~Gv~v~~-~a~~~ 78 (137)
.|+.|. ...+..|++-+|++.. ..+|.+.+ .....|.+|+++... ...+.+.. ....+
T Consensus 86 ~gl~i~~~~~NVIIrnl~i~~~~~~~~~DaI~i~g~~~~~s~nVWIDH~s~s~~~~~~~~~~~~~~Dg~idi~~~s~~VT 165 (330)
T 2qy1_A 86 FGIRVVGNAHNVIIQNMTIGLLQGGEDADSISLEGNSSGEPSKIWVDHNTVFASLTKCSGAGDASFDGGIDMKKGVHHVT 165 (330)
T ss_dssp SEEEEESSCEEEEEESCEEESCSSGGGCCSEEEECBTTBCCEEEEEESCEEECCCCCCTTCTTCSSCCSEEEESSCEEEE
T ss_pred eeEEEeCCCCeEEEeCeEEeCCCCCCCCcceeeccccCcccccEEEEeEEEEccccccccCCcceeecccccccCcceEE
Confidence 467776 5557778888888763 46788874 556678888886432 22355554 34667
Q ss_pred EEeeEEEcCCcccEEEEeC------------------------------CeeEEEccEEEccccCcEEEecCCCeEEece
Q psy683 79 LRRNRIHSGKQVGVYFYDN------------------------------GHGKLEDNDIFNHLYSGVQISNETTATLDAC 128 (137)
Q Consensus 79 i~~n~I~~~~~~GI~v~~~------------------------------~~g~ie~n~I~~n~~~Gi~v~~~a~p~l~~n 128 (137)
|.+|.+++... +.++..+ +..-+-+|.+++....++....++...+++|
T Consensus 166 ISnn~f~~h~k-~~L~G~sd~~~~~~~~~vT~h~N~f~~~~~R~Pr~r~G~~hv~NN~~~n~~~~~i~~~~~~~i~~e~N 244 (330)
T 2qy1_A 166 VSYNYVYNYQK-VALNGYSDSDTKNSAARTTYHHNRFENVESRVPLQRFGLSHIYNNYFNNVTTSGINVRMGGIAKIESN 244 (330)
T ss_dssp EESCEEEEEEE-CCEESSSTTCGGGGGCEEEEESCEEEEEEECTTEEESSEEEEESCEEEEECSCSEEEETTCEEEEESC
T ss_pred EEcceeccCCe-EEEECCCCccccCCCceEEEECcEEcCCCCCCCceecceEEEEeeEEEcccceEeccCCCcEEEEEcc
Confidence 78887765432 2222211 2223556666666667888888787788888
Q ss_pred EEecC
Q psy683 129 GLRRS 133 (137)
Q Consensus 129 ~I~~~ 133 (137)
.+...
T Consensus 245 ~F~~~ 249 (330)
T 2qy1_A 245 YFENI 249 (330)
T ss_dssp EEEEE
T ss_pred EEECC
Confidence 77654
No 58
>1pcl_A Pectate lyase E; lyase (acting on polysaccharides); 2.20A {Erwinia chrysanthemi} SCOP: b.80.1.1
Probab=94.03 E-value=0.96 Score=35.48 Aligned_cols=68 Identities=10% Similarity=0.129 Sum_probs=46.2
Q ss_pred CEEEecCCCcEEeccEEEcC---------------CCCcEEEEeCceeEEEeeEEEeCC----------------cCcE-
Q psy683 22 GIQIRTSSDPIVRHNKIHHG---------------QHGGVYVHEKGVGLIEENEVYANT----------------LAGV- 69 (137)
Q Consensus 22 GI~v~~~a~~~i~~n~I~~~---------------~~~GI~v~~~~~~~i~~n~I~~n~----------------~~Gv- 69 (137)
|+.+....+..|++-+|++. ...+|.+.+.....|.+|+++... .+|+
T Consensus 97 gl~i~~~~NVIIrnl~i~~~~~~~p~~~~~~g~~~~~DaI~i~~s~nVWIDH~s~s~~~~~d~~~~~~~G~~~~~~Dgl~ 176 (355)
T 1pcl_A 97 SLVIKGVKNVILRNLYIETPVDVAPHYESGDGWNAEWDAAVIDNSTNVWVDHVTISDGSFTDDKYTTKDGEKYVQHDGAL 176 (355)
T ss_pred EEEEecCCeEEEeeeEEEcCcccccccccccCccccCceEEecCCCcEEEEeeEEeccccCccccccccCccccccccce
Confidence 56665566778888888853 235788877777788999998642 2443
Q ss_pred EEc-cCCccEEEeeEEEcCCc
Q psy683 70 WIT-TGSAPVLRRNRIHSGKQ 89 (137)
Q Consensus 70 ~v~-~~a~~~i~~n~I~~~~~ 89 (137)
.+. .....+|.+|.+++...
T Consensus 177 Di~~~s~~VTiS~n~f~~h~k 197 (355)
T 1pcl_A 177 DIKKGSDYVTISYSRFELHDK 197 (355)
T ss_pred eeecCCCcEEEEeeEEcCCCc
Confidence 344 34667888888887643
No 59
>3vmv_A Pectate lyase; polysaccharide lyase family 1, beta-helix, pectolytic, polygalacturonate; 1.54A {Bacillus} PDB: 3vmw_A*
Probab=93.49 E-value=1.7 Score=33.68 Aligned_cols=112 Identities=13% Similarity=0.148 Sum_probs=73.8
Q ss_pred CCEEEecCCCcEEeccEEEcCC---CCcEEEEe-CceeEEEeeEEEeCC--------cCc-EEEccC-CccEEEeeEEEc
Q psy683 21 AGIQIRTSSDPIVRHNKIHHGQ---HGGVYVHE-KGVGLIEENEVYANT--------LAG-VWITTG-SAPVLRRNRIHS 86 (137)
Q Consensus 21 ~GI~v~~~a~~~i~~n~I~~~~---~~GI~v~~-~~~~~i~~n~I~~n~--------~~G-v~v~~~-a~~~i~~n~I~~ 86 (137)
.|+.|....+..|++.+|++.. ..+|.+.+ .....|.+|+++... .+| +.+..+ ...||.+|.+++
T Consensus 95 ~gl~i~~a~NVIIrNl~i~~~~~~~~DaI~i~~~s~nVWIDH~s~s~~~~g~~~~~~~Dgl~di~~~s~~VTISnn~f~~ 174 (326)
T 3vmv_A 95 IGIRLSNAHNIIIQNVSIHHVREGEGTAIEVTDDSKNVWIDHNEFYSEFPGNGDSDYYDGLVDMKRNAEYITVSWNKFEN 174 (326)
T ss_dssp CCEEEESEEEEEEESCEEECCCSTTSCSEEEETTCEEEEEESCEEECCSSTTSCTTSSCCSEEECTTCEEEEEESCEEEE
T ss_pred cEEEEEecceEEEECeEEEcCCCCCCCeEEEecCCCcEEEEeeEEeccccCCcCccccCcceEecCCCceEEEEceEEec
Confidence 4677766678888888888753 57888886 556778899987421 233 455543 456788887776
Q ss_pred CCcccEEEEeC-----------------------------CeeEEEccEEEccccCcEEEecCCCeEEeceEEecC
Q psy683 87 GKQVGVYFYDN-----------------------------GHGKLEDNDIFNHLYSGVQISNETTATLDACGLRRS 133 (137)
Q Consensus 87 ~~~~GI~v~~~-----------------------------~~g~ie~n~I~~n~~~Gi~v~~~a~p~l~~n~I~~~ 133 (137)
-. .+.++..+ +..-+-+|.+++....++....++...+++|.+...
T Consensus 175 h~-k~~LiG~sd~~~~~~~~vT~~~N~f~~~~~R~Pr~r~G~~Hv~NN~~~n~~~~~~~~~~~a~v~~e~N~F~~~ 249 (326)
T 3vmv_A 175 HW-KTMLVGHTDNASLAPDKITYHHNYFNNLNSRVPLIRYADVHMFNNYFKDINDTAINSRVGARVFVENNYFDNV 249 (326)
T ss_dssp EE-ECEEECSSSCGGGCCEEEEEESCEEEEEEECTTEEESCEEEEESCEEEEESSCSEEEETTCEEEEESCEEEEE
T ss_pred Cc-eEEEECCCCCCcccCccEEEEeeEecCCcCcCCcccCCcEEEEccEEECCCceEEeecCCcEEEEEceEEECC
Confidence 43 23333221 222355677776667788888888888888887765
No 60
>1dab_A P.69 pertactin; pertussis beta helix, cell adhesion; 2.50A {Bordetella pertussis} SCOP: b.80.1.7 PDB: 2iou_G
Probab=93.49 E-value=1.6 Score=36.15 Aligned_cols=97 Identities=11% Similarity=0.137 Sum_probs=67.2
Q ss_pred CEEEecCCCcEEeccEEEcCCCCcEEEEeCceeEEEeeEEEeCCc--------------------------------CcE
Q psy683 22 GIQIRTSSDPIVRHNKIHHGQHGGVYVHEKGVGLIEENEVYANTL--------------------------------AGV 69 (137)
Q Consensus 22 GI~v~~~a~~~i~~n~I~~~~~~GI~v~~~~~~~i~~n~I~~n~~--------------------------------~Gv 69 (137)
++.+...+..++...++++....|++....+...+.+-.|.--.. .||
T Consensus 185 ~~~~~~~~~~~~~~~~t~G~~s~G~~A~~Gg~i~lt~~ti~T~g~~A~gi~s~~~i~~~~~~~~~~~~~~~~~~a~a~gv 264 (539)
T 1dab_A 185 AVSVLGASELTLDGGHITGGRAAGVAAMQGAVVHLQRATIRRGDALAGGAVPGGAVPGGAVPGGFGPGGFGPVLDGWYGV 264 (539)
T ss_dssp EEEEESSEEEEEEEEEEEECSSEEEEEESSCEEEEEEEEEESCCCCCSSSSSCSSCCSCCCCSSSCCSSCCCSSCSEEEE
T ss_pred eeeeccccceecccceeecccceeeEEccCcEEEEeccEEEeCCcccceEEeecccccccceeecccccceeccccceeE
Confidence 456666677778888899988899999988888888888876221 234
Q ss_pred EEccCCccEEEeeEEEc-CCcccEEEEeCCeeEEEccEEEccccCcEEEec
Q psy683 70 WITTGSAPVLRRNRIHS-GKQVGVYFYDNGHGKLEDNDIFNHLYSGVQISN 119 (137)
Q Consensus 70 ~v~~~a~~~i~~n~I~~-~~~~GI~v~~~~~g~ie~n~I~~n~~~Gi~v~~ 119 (137)
.+. ++...|.+.+|.. ..+.+|.+...+.-.+.+-++.......|++..
T Consensus 265 ~~~-~~~i~L~~S~I~t~g~gaai~~~~~~~~tl~ngsl~s~~G~~i~~~g 314 (539)
T 1dab_A 265 DVS-GSSVELAQSIVEAPELGAAIRVGRGARVTVPGGSLSAPHGNVIETGG 314 (539)
T ss_dssp EEE-SSEEEEESCEEECCSSEEEEEEETTCEEEEESSEEEEEEEEEEEEEC
T ss_pred eec-CCEEEEecCEEEecCCCceEEEecCcEEEEeCCEEEeCCCceEEecC
Confidence 444 6677778888877 345667666666666666566555555666653
No 61
>1air_A Pectate lyase C, PELC; pectate cleavage, pectinolyitc activity, trans-elimination; 2.20A {Erwinia chrysanthemi} SCOP: b.80.1.1 PDB: 1o88_A 1o8d_A 1o8e_A 1o8f_A 1o8g_A 1o8h_A 1o8i_A 1o8j_A 1o8k_A 1o8l_A 1o8m_A 1plu_A 2pec_A 2ewe_A*
Probab=93.48 E-value=0.77 Score=36.02 Aligned_cols=36 Identities=17% Similarity=0.101 Sum_probs=22.8
Q ss_pred ccEEEeeEEEcCCcccEEEEeCCeeEEEccEEEccc
Q psy683 76 APVLRRNRIHSGKQVGVYFYDNGHGKLEDNDIFNHL 111 (137)
Q Consensus 76 ~~~i~~n~I~~~~~~GI~v~~~~~g~ie~n~I~~n~ 111 (137)
...+.+|.+++....|+....+++-++|+|.+....
T Consensus 226 ~~Hv~NN~~~n~~~~~~~~~~~~~i~~e~N~F~~~~ 261 (353)
T 1air_A 226 LVHAYNNLYTNITGSGLNVRQNGQALIENNWFEKAI 261 (353)
T ss_dssp EEEEESCEEEEESSCSEEEETTCEEEEESCEEEEEE
T ss_pred eEEEEccEEECCCCceeccCCCcEEEEEceEEECCC
Confidence 445556666665566777766677777777766543
No 62
>3grh_A YBHC, acyl-COA thioester hydrolase YBGC; beta-helix, periplasmic, lipoprotein, outer membrane, carbohydrate esterase family 8; 1.70A {Escherichia coli k-12}
Probab=92.04 E-value=4 Score=32.80 Aligned_cols=113 Identities=9% Similarity=0.027 Sum_probs=64.0
Q ss_pred eEEEEeeEEEcCccCCEEEe-----------cCCCcEEeccEEEcCCCCcEEEEeCceeEEEeeEEEeCCc----CcEEE
Q psy683 7 KAQVLMMVHCGNALAGIQIR-----------TSSDPIVRHNKIHHGQHGGVYVHEKGVGLIEENEVYANTL----AGVWI 71 (137)
Q Consensus 7 ~g~i~~c~I~~~~~~GI~v~-----------~~a~~~i~~n~I~~~~~~GI~v~~~~~~~i~~n~I~~n~~----~Gv~v 71 (137)
+..|.+|.|.+. ..-+++. ...+-.+++|.|.+.- =||++.+..++++|+|+.... .|...
T Consensus 234 r~~fy~C~f~G~-QDTLy~~~~~~~~~~~~d~~gRqyy~~CyIeGtV---DFIFG~a~AvFe~C~I~s~~~~~~~~g~IT 309 (422)
T 3grh_A 234 QVQINNVNILGR-QNTFFVTNSGVQNRLETNRQPRTLVTNSYIEGDV---DIVSGRGAVVFDNTEFRVVNSRTQQEAYVF 309 (422)
T ss_dssp SEEEEEEEEECS-TTCEEECCCCTTCSCCSSCCCEEEEESCEEEESE---EEEEESSEEEEESCEEEECCSSCSSCCEEE
T ss_pred cEEEEeeEEEee-cceeeeccccccccccccccccEEEEecEEeccc---cEEccCceEEEEeeEEEEecCCCCCceEEE
Confidence 456777777775 3566663 2345667777777543 367778888888888876442 23332
Q ss_pred ccCC------ccEEEeeEEEcCCcccEEEE----eCC----eeEEEccEEEccccC--cEEEe-cCCCe
Q psy683 72 TTGS------APVLRRNRIHSGKQVGVYFY----DNG----HGKLEDNDIFNHLYS--GVQIS-NETTA 123 (137)
Q Consensus 72 ~~~a------~~~i~~n~I~~~~~~GI~v~----~~~----~g~ie~n~I~~n~~~--Gi~v~-~~a~p 123 (137)
.... --++.+|+|......-+|+. ..+ +.+|.+|.+.+.-.+ |+.-. ...+|
T Consensus 310 A~~t~~~~~~Gfvf~nC~ita~~~~~~yLGRPW~~ysrt~~qVVf~~s~l~~~I~p~~GW~~m~~s~r~ 378 (422)
T 3grh_A 310 APATLSNIYYGFLAVNSRFNAFGDGVAQLGRSLDVDANTNGQVVIRDSAINEGFNTAKPWADAVISNRP 378 (422)
T ss_dssp EECCBTTCCCCEEEESCEEEECSSSCBEEEEEECCSTTBCCEEEEESCEECTTBCSSCCEEEEETTCCC
T ss_pred ecCCCCCCCCEEEEECCEEEeCCCCCEEcCCCCCCcCCcCccEEEEeCcccCccCCCCCchhhhccCCC
Confidence 2211 23567777775433334553 112 247777777776553 66533 33333
No 63
>1x0c_A Isopullulanase; glycoside hydrolase family 49, glycoprotein, hydro; HET: NAG; 1.70A {Aspergillus niger} PDB: 1wmr_A* 2z8g_A*
Probab=91.87 E-value=0.94 Score=37.53 Aligned_cols=100 Identities=11% Similarity=-0.007 Sum_probs=74.3
Q ss_pred EEEEeeEEEcCccCCEEEecCC--C--cEEeccEEEcC---CCCcEEEEeCceeEEEeeEEEeCCcCcEEEccCCccEEE
Q psy683 8 AQVLMMVHCGNALAGIQIRTSS--D--PIVRHNKIHHG---QHGGVYVHEKGVGLIEENEVYANTLAGVWITTGSAPVLR 80 (137)
Q Consensus 8 g~i~~c~I~~~~~~GI~v~~~a--~--~~i~~n~I~~~---~~~GI~v~~~~~~~i~~n~I~~n~~~Gv~v~~~a~~~i~ 80 (137)
-+|++-.|.+....-+.+...+ + .+|++.++... ...||-+. ...+|++|.|... .+.|.+.. .+.+++
T Consensus 295 V~I~Giti~Nsp~w~i~i~~~~~~ni~V~I~n~~i~~~~~~NTDGidi~--~nV~I~n~~i~~g-DDcIaIks-~NI~I~ 370 (549)
T 1x0c_A 295 FVLNGVTVSAPPFNSMDWSGNSLDLITCRVDDYKQVGAFYGQTDGLEMY--PGTILQDVFYHTD-DDGLKMYY-SNVTAR 370 (549)
T ss_dssp EEEESCEEECCSSCSEEEECSCGGGEEEEEEEEEEECCCBTTCCCCBCC--TTCEEEEEEEEES-SCCEECCS-SSEEEE
T ss_pred EEEECcEEECCCceeEEeeccCCCCCeEEEEeeEeEcCCCCCCCccccc--CCEEEEeeEEeCC-CCEEEECC-CCEEEE
Confidence 3677888888888888866554 6 78999988641 24788776 6778888888665 56888876 899999
Q ss_pred eeEEEcCCccc-EEEEeCC----eeEEEccEEEccc
Q psy683 81 RNRIHSGKQVG-VYFYDNG----HGKLEDNDIFNHL 111 (137)
Q Consensus 81 ~n~I~~~~~~G-I~v~~~~----~g~ie~n~I~~n~ 111 (137)
+|.+....+.+ |.+.... .-++++|.|.+..
T Consensus 371 n~~~~~~~g~~~IsiGs~~~~V~NV~v~n~~i~~s~ 406 (549)
T 1x0c_A 371 NIVMWKESVAPVVEFGWTPRNTENVLFDNVDVIHQA 406 (549)
T ss_dssp EEEEEECSSSCSEECCBSCCCEEEEEEEEEEEEECC
T ss_pred eeEEEcCCCCceEEECCCCCcEEEEEEEeeEEECcc
Confidence 99999877667 7765332 2368888888875
No 64
>1air_A Pectate lyase C, PELC; pectate cleavage, pectinolyitc activity, trans-elimination; 2.20A {Erwinia chrysanthemi} SCOP: b.80.1.1 PDB: 1o88_A 1o8d_A 1o8e_A 1o8f_A 1o8g_A 1o8h_A 1o8i_A 1o8j_A 1o8k_A 1o8l_A 1o8m_A 1plu_A 2pec_A 2ewe_A*
Probab=91.07 E-value=4.6 Score=31.58 Aligned_cols=113 Identities=23% Similarity=0.269 Sum_probs=69.9
Q ss_pred CCEEEecCCCcEEeccEEEcC-----CCCcEEEEeCceeEEEeeEEEeCC------------cCc-EEEc-cCCccEEEe
Q psy683 21 AGIQIRTSSDPIVRHNKIHHG-----QHGGVYVHEKGVGLIEENEVYANT------------LAG-VWIT-TGSAPVLRR 81 (137)
Q Consensus 21 ~GI~v~~~a~~~i~~n~I~~~-----~~~GI~v~~~~~~~i~~n~I~~n~------------~~G-v~v~-~~a~~~i~~ 81 (137)
.||.+....+..|++-+|+.. ...+|.+.+.....|.+|+++.-. .+| +.+. .....+|.+
T Consensus 103 ~gl~i~~~~NVIIrnl~i~~~~~~~~~~DaI~i~~s~nVWIDH~s~s~~~~~~~g~~~~~~~~DGl~di~~~s~~VTISn 182 (353)
T 1air_A 103 FGIWIKKSSDVVVQNMRIGYLPGGAKDGDMIRVDDSPNVWVDHNELFAANHECDGTPDNDTTFESAVDIKGASNTVTVSY 182 (353)
T ss_dssp SEEEEESCCSEEEESCEEESCSCGGGTCCSEEEESCCSEEEESCEEECCSCCCTTCGGGCCSSCCSEEEESSCCEEEEES
T ss_pred ceEEEeccCcEEEeccEEEeCCCCCCCCCeEEeeCCCcEEEEeeEEecCCcccccccccccccccceeeecccCcEEEEe
Confidence 367777667888888888853 236788887777788899887531 133 4454 345667888
Q ss_pred eEEEcCCcccEE------------EE--------------eCCeeEEEccEEEccccCcEEEecCCCeEEeceEEecC
Q psy683 82 NRIHSGKQVGVY------------FY--------------DNGHGKLEDNDIFNHLYSGVQISNETTATLDACGLRRS 133 (137)
Q Consensus 82 n~I~~~~~~GI~------------v~--------------~~~~g~ie~n~I~~n~~~Gi~v~~~a~p~l~~n~I~~~ 133 (137)
|.+++.....+. +. ..+..-+-+|.+++....++....++...+++|.+...
T Consensus 183 n~f~~h~k~~LiG~sd~~~g~~vT~hhN~f~~~~~R~Pr~r~G~~Hv~NN~~~n~~~~~~~~~~~~~i~~e~N~F~~~ 260 (353)
T 1air_A 183 NYIHGVKKVGLDGSSSSDTGRNITYHHNYYNDVNARLPLQRGGLVHAYNNLYTNITGSGLNVRQNGQALIENNWFEKA 260 (353)
T ss_dssp CEEEEEEECCEESSSTTCCCCEEEEESCEEEEEEECSCEEESSEEEEESCEEEEESSCSEEEETTCEEEEESCEEEEE
T ss_pred eEEcCCCceeEECCCcCCCCceEEEEceEEcCCcCCCCCCcCceEEEEccEEECCCCceeccCCCcEEEEEceEEECC
Confidence 877754322211 10 01222345565666566677777777777777776654
No 65
>1h80_A IOTA-carrageenase; hydrolase, IOTA-carrageenan double helix degradation; 1.6A {Alteromonas SP} SCOP: b.80.1.8 PDB: 1ktw_A* 3lmw_A
Probab=89.82 E-value=3 Score=33.84 Aligned_cols=96 Identities=14% Similarity=-0.002 Sum_probs=51.5
Q ss_pred CCEEEecCCCcEEeccEEEcCCCCcE---EEEeCceeEEEeeEEEeCCcCcEEEccC------------CccEEEeeEEE
Q psy683 21 AGIQIRTSSDPIVRHNKIHHGQHGGV---YVHEKGVGLIEENEVYANTLAGVWITTG------------SAPVLRRNRIH 85 (137)
Q Consensus 21 ~GI~v~~~a~~~i~~n~I~~~~~~GI---~v~~~~~~~i~~n~I~~n~~~Gv~v~~~------------a~~~i~~n~I~ 85 (137)
.|+.+ ...+.+|++++|.... .|+ ........+|++|.+.+ ..||.+..+ .+.+++++.+.
T Consensus 168 DGi~i-~s~nV~I~n~~I~~gd-dgiGs~~~~~~~NV~V~n~~~~g--g~GIrIktg~d~IG~~~~g~v~NI~~~Ni~~~ 243 (464)
T 1h80_A 168 NGRLH-WSRNGIIERIKQNNAL-FGYGLIQTYGADNILFRNLHSEG--GIALRMETDNLLMKNYKQGGIRNIFADNIRCS 243 (464)
T ss_dssp TTEEE-EEEEEEEEEEEEESCC-TTCEEEEESEEEEEEEEEEEEES--SEEEEEECCCHHHHHHTCCEEEEEEEEEEEEE
T ss_pred CCcee-eccCEEEeceEEecCC-CeEEecccCCEeEEEEEeeEEEC--CCEEEEEeCCceeccCCCCcEEEEEEEeEEEE
Confidence 34444 4456667777776543 333 22223344567777666 556666443 23456666666
Q ss_pred cCCcccEEEEeCC----eeEEEccEEEccccCcEEEecCCC
Q psy683 86 SGKQVGVYFYDNG----HGKLEDNDIFNHLYSGVQISNETT 122 (137)
Q Consensus 86 ~~~~~GI~v~~~~----~g~ie~n~I~~n~~~Gi~v~~~a~ 122 (137)
+.. .+|.+.... .-++++....+. ..+|.+.++..
T Consensus 244 nv~-~~I~I~p~~~~isnItfeNI~~t~~-~~aI~i~q~y~ 282 (464)
T 1h80_A 244 KGL-AAVMFGPHFMKNGDVQVTNVSSVSC-GSAVRSDSGFV 282 (464)
T ss_dssp SSS-EEEEEECTTCBCCCEEEEEEEEESS-SCSEEECCCCC
T ss_pred CCc-eeEEEeCCCceEeEEEEEEEEEEcc-ceeEEEecCcc
Confidence 554 467766433 345555555553 35666655443
No 66
>2o04_A Pectate lyase, PL; hexasaccharide compound II, calciums; HET: ADA; 1.70A {Bacillus subtilis} PDB: 2nzm_A* 2o0v_A* 2o0w_A 2o17_A* 2o1d_A* 2bsp_A 1bn8_A 3krg_A*
Probab=88.94 E-value=2.2 Score=33.99 Aligned_cols=101 Identities=7% Similarity=-0.138 Sum_probs=66.0
Q ss_pred EEEEeeEEEcCc-----------------cCCEEEec-CCCcEEeccEEEcCCCCcEEEEeC---------ceeEEEeeE
Q psy683 8 AQVLMMVHCGNA-----------------LAGIQIRT-SSDPIVRHNKIHHGQHGGVYVHEK---------GVGLIEENE 60 (137)
Q Consensus 8 g~i~~c~I~~~~-----------------~~GI~v~~-~a~~~i~~n~I~~~~~~GI~v~~~---------~~~~i~~n~ 60 (137)
-.|.+|+++... .--+.+.. ....+|++|.+++.. .+.++..+ -+.++.+|-
T Consensus 194 VWIDHcs~s~~~~~d~~~~~~~G~~~~~~Dgl~Di~~~s~~VTISnn~f~~h~-k~~LiG~sd~~~~d~g~~~vT~h~N~ 272 (399)
T 2o04_A 194 IWIDHCTFNDGSRPDSTSPKYYGRKYQHHDGQTDASNGANYITMSYNYYHDHD-KSSIFGSSDSKTSDDGKLKITLHHNR 272 (399)
T ss_dssp EEEESCEEECTTCCGGGSCEETTEECCCCCCSEEEETTCEEEEEESCEEEEEE-ECCEESCCTTCGGGTTCCCEEEESCE
T ss_pred EEEEeeeeecCCCccccccccccceeeccccceeeeccCCcEEEEeeEEcCCC-ceeEeCCCCCCccccCceeEEEECcE
Confidence 368899999642 22344553 448899999998754 34444322 167888888
Q ss_pred EEeCCcCcEEEccCCccEEEeeEEEcCCc-------ccEEEEeCCeeEEEccEEEcc
Q psy683 61 VYANTLAGVWITTGSAPVLRRNRIHSGKQ-------VGVYFYDNGHGKLEDNDIFNH 110 (137)
Q Consensus 61 I~~n~~~Gv~v~~~a~~~i~~n~I~~~~~-------~GI~v~~~~~g~ie~n~I~~n 110 (137)
+.++..-.=.++ .....+.+|-++.... .++-+..+++-++|+|.+...
T Consensus 273 f~~~~~R~Pr~R-~G~~Hv~NN~~~n~~~~~~~~~~ya~g~~~~~~i~~e~N~F~~~ 328 (399)
T 2o04_A 273 YKNIVQAAPRVR-FGQVHVYNNYYEGSTSSSSYPFSYAWGIGKSSKIYAQNNVIDVP 328 (399)
T ss_dssp EEEEEECTTEES-SCEEEEESCEEECCTTCSSSCCCCSEEECTTCEEEEESCEEECT
T ss_pred ecCCcccCCCcc-cceEEEEcceEECCCCCCccceeeEeccCCCcEEEEEceEEECC
Confidence 876554333343 3457788888775532 566666778888899988774
No 67
>1vbl_A Pectate lyase 47; PL 47, thermostable, bacillus subtilis, pectin, calcium ION; 1.91A {Bacillus SP}
Probab=88.55 E-value=4.2 Score=32.52 Aligned_cols=68 Identities=13% Similarity=0.175 Sum_probs=44.4
Q ss_pred CCEEEecCCCcEEeccEEEcC-------------------CCCcEEEEeCceeEEEeeEEEeCC----------------
Q psy683 21 AGIQIRTSSDPIVRHNKIHHG-------------------QHGGVYVHEKGVGLIEENEVYANT---------------- 65 (137)
Q Consensus 21 ~GI~v~~~a~~~i~~n~I~~~-------------------~~~GI~v~~~~~~~i~~n~I~~n~---------------- 65 (137)
.|+.|....+..|++-+|++. ...+|.+.+.....|.+|+++...
T Consensus 148 ~gl~i~~~~NVIIrNl~i~~~~~~~p~~~p~~~~~~~~~~~~DaI~i~~s~nVWIDHcs~s~~~~~d~~~~~~~Gr~~~~ 227 (416)
T 1vbl_A 148 GGFLIKNVDNVIIRNIEFEAPLDYFPEWDPTDGTLGEWNSEYDSISIEGSSHIWIDHNTFTDGDHPDRSLGTYFGRPFQQ 227 (416)
T ss_dssp CEEEEESCEEEEEESCEEECCCCSSCEEETTSTTTCEEECCCCSEEEESCEEEEEESCEEECTTCCGGGSCEETTEECCC
T ss_pred CEEEeecCceEEEeCeEEEcCccccccccccccccccccCCCceEEecCCceEEEEccEEecCCCcccccccccCcceee
Confidence 356665556777888888653 235788877777788888888642
Q ss_pred cCc-EEEcc-CCccEEEeeEEEcCC
Q psy683 66 LAG-VWITT-GSAPVLRRNRIHSGK 88 (137)
Q Consensus 66 ~~G-v~v~~-~a~~~i~~n~I~~~~ 88 (137)
.+| +.+.. ....+|.+|.+++..
T Consensus 228 ~DGl~Di~~~s~~VTISnn~f~~h~ 252 (416)
T 1vbl_A 228 HDGALDIKNSSDFITISYNVFTNHD 252 (416)
T ss_dssp CCCSEEEESSCEEEEEESCEEEEEE
T ss_pred cccceeeecCCCcEEEEeeEEcCCC
Confidence 233 33543 446678888877653
No 68
>1pe9_A Pectate lyase A; parallel beta helix; 1.60A {Erwinia chrysanthemi} SCOP: b.80.1.1 PDB: 1ooc_A 1jta_A 1jrg_A
Probab=87.64 E-value=4.3 Score=31.82 Aligned_cols=68 Identities=12% Similarity=0.152 Sum_probs=45.3
Q ss_pred CCEEE---ecCCCcEEeccEEEcC---------------CCCcEEEEe-CceeEEEeeEEEeCC----------------
Q psy683 21 AGIQI---RTSSDPIVRHNKIHHG---------------QHGGVYVHE-KGVGLIEENEVYANT---------------- 65 (137)
Q Consensus 21 ~GI~v---~~~a~~~i~~n~I~~~---------------~~~GI~v~~-~~~~~i~~n~I~~n~---------------- 65 (137)
.|+.| ....+..|++-+|++. ...+|.+.+ .....|.+|+++...
T Consensus 103 ~gl~i~~~~~~~NVIIrNl~i~~~~d~~p~~~~~~g~~~~~DaI~i~~~s~nVWIDHcs~s~~~~~~~~~~~~~G~~~~~ 182 (361)
T 1pe9_A 103 GSLIIDGTDGTNNVIIRNVYIQTPIDVEPHYEKGDGWNAEWDAMNITNGAHHVWIDHVTISDGNFTDDMYTTKDGETYVQ 182 (361)
T ss_dssp SEEEEEGGGTCEEEEEESCEEECCCCSSCEEETTTEEECCCCSEEEETTCEEEEEESCEEECTTSCGGGCCEETTEECCC
T ss_pred CEEEEecCCCCceEEEeCeEEEcCcccccccccccCcccCCceEEeecCCceEEEEccEeecccccccccccccCcceee
Confidence 35666 4455777888888853 245888888 666778899998642
Q ss_pred cCc-EEEcc-CCccEEEeeEEEcCC
Q psy683 66 LAG-VWITT-GSAPVLRRNRIHSGK 88 (137)
Q Consensus 66 ~~G-v~v~~-~a~~~i~~n~I~~~~ 88 (137)
.+| |.+.. ....+|.+|.+++-.
T Consensus 183 ~DgllDi~~~s~~VTiS~n~f~~h~ 207 (361)
T 1pe9_A 183 HDGALDIKRGSDYVTISNSLIDQHD 207 (361)
T ss_dssp CCCSEEECTTCEEEEEESCEEEEEE
T ss_pred ccceeeeecCCCcEEEEeeEEcCCC
Confidence 233 44553 456688888887754
No 69
>3grh_A YBHC, acyl-COA thioester hydrolase YBGC; beta-helix, periplasmic, lipoprotein, outer membrane, carbohydrate esterase family 8; 1.70A {Escherichia coli k-12}
Probab=86.66 E-value=11 Score=30.25 Aligned_cols=106 Identities=8% Similarity=0.081 Sum_probs=60.4
Q ss_pred EEEe-cCCCcEEeccEEEcCCCCcEEEE-----------eCceeEEEeeEEEeCCcCcEEEccCCccEEEeeEEEcCCc-
Q psy683 23 IQIR-TSSDPIVRHNKIHHGQHGGVYVH-----------EKGVGLIEENEVYANTLAGVWITTGSAPVLRRNRIHSGKQ- 89 (137)
Q Consensus 23 I~v~-~~a~~~i~~n~I~~~~~~GI~v~-----------~~~~~~i~~n~I~~n~~~Gv~v~~~a~~~i~~n~I~~~~~- 89 (137)
|.+. .+.+..+.+|++.+.+ .=+++. ..++-.+.+|.|.+.-. +|-..+...+.+|.|+.-+.
T Consensus 226 VAL~v~gDr~~fy~C~f~G~Q-DTLy~~~~~~~~~~~~d~~gRqyy~~CyIeGtVD---FIFG~a~AvFe~C~I~s~~~~ 301 (422)
T 3grh_A 226 VALRTDGDQVQINNVNILGRQ-NTFFVTNSGVQNRLETNRQPRTLVTNSYIEGDVD---IVSGRGAVVFDNTEFRVVNSR 301 (422)
T ss_dssp CSEEECCSSEEEEEEEEECST-TCEEECCCCTTCSCCSSCCCEEEEESCEEEESEE---EEEESSEEEEESCEEEECCSS
T ss_pred EEEEecCCcEEEEeeEEEeec-ceeeeccccccccccccccccEEEEecEEecccc---EEccCceEEEEeeEEEEecCC
Confidence 4444 4456777778877654 445553 24566777888877532 24456777777787775432
Q ss_pred ---ccEEEEeCC------eeEEEccEEEccccCcEEEec----CCCe----EEeceEEec
Q psy683 90 ---VGVYFYDNG------HGKLEDNDIFNHLYSGVQISN----ETTA----TLDACGLRR 132 (137)
Q Consensus 90 ---~GI~v~~~~------~g~ie~n~I~~n~~~Gi~v~~----~a~p----~l~~n~I~~ 132 (137)
.|.....+. .-+|.+|+|......-+++.. .+++ ++..|.|.+
T Consensus 302 ~~~~g~ITA~~t~~~~~~Gfvf~nC~ita~~~~~~yLGRPW~~ysrt~~qVVf~~s~l~~ 361 (422)
T 3grh_A 302 TQQEAYVFAPATLSNIYYGFLAVNSRFNAFGDGVAQLGRSLDVDANTNGQVVIRDSAINE 361 (422)
T ss_dssp CSSCCEEEEECCBTTCCCCEEEESCEEEECSSSCBEEEEEECCSTTBCCEEEEESCEECT
T ss_pred CCCceEEEecCCCCCCCCEEEEECCEEEeCCCCCEEcCCCCCCcCCcCccEEEEeCcccC
Confidence 344333221 126777888765444455542 3333 666666654
No 70
>1pcl_A Pectate lyase E; lyase (acting on polysaccharides); 2.20A {Erwinia chrysanthemi} SCOP: b.80.1.1
Probab=83.34 E-value=14 Score=28.74 Aligned_cols=21 Identities=29% Similarity=0.354 Sum_probs=12.5
Q ss_pred CCEEEecCCCcEEeccEEEcC
Q psy683 21 AGIQIRTSSDPIVRHNKIHHG 41 (137)
Q Consensus 21 ~GI~v~~~a~~~i~~n~I~~~ 41 (137)
.+|.+....+.-|.+|++..+
T Consensus 134 DaI~i~~s~nVWIDH~s~s~~ 154 (355)
T 1pcl_A 134 DAAVIDNSTNVWVDHVTISDG 154 (355)
T ss_pred ceEEecCCCcEEEEeeEEecc
Confidence 456665555666666666654
No 71
>2xt2_A ALBG, MCBG-like protein; cell cycle, right handed quadrilateral beta helix; 2.00A {Xanthomonas albilineans} PDB: 2xt4_A
Probab=79.58 E-value=5.4 Score=27.57 Aligned_cols=98 Identities=12% Similarity=0.078 Sum_probs=60.3
Q ss_pred EEEEeeEEEcCccCCEEEecCCCcEEeccEEEcCCCCcEEEEeCceeEEEeeEEEeCCcCcEEEccCCccEEEeeEEEcC
Q psy683 8 AQVLMMVHCGNALAGIQIRTSSDPIVRHNKIHHGQHGGVYVHEKGVGLIEENEVYANTLAGVWITTGSAPVLRRNRIHSG 87 (137)
Q Consensus 8 g~i~~c~I~~~~~~GI~v~~~a~~~i~~n~I~~~~~~GI~v~~~~~~~i~~n~I~~n~~~Gv~v~~~a~~~i~~n~I~~~ 87 (137)
..+++|.+.+....+..+. ...+.++.+.++.-.+..+.+ ..+.+|.+.+....+..+. ...+.++.+.+.
T Consensus 9 ~~~~~~~f~~~~l~~~~l~---~~~~~~~~f~~~~~~~~~l~~---~~~~~~~f~~~~l~~a~~~---~a~l~~~~f~~~ 79 (200)
T 2xt2_A 9 KDYCGESFVSEDRSGQSLE---SIRFEDCTFRQCNFTEAELNR---CKFRECEFVDCNLSLISIP---QTSFMEVRFVDC 79 (200)
T ss_dssp SEEESCEEESCBCTTCEEE---SCEEESCEEESCBCTTCEEES---CEEEEEEEESCBCTTCBCT---TCEEEEEEEESC
T ss_pred chhcCCEeecCccccCccc---cCEEccCEEEeeeccCCeecC---CEEEecEeeecccccCccc---cCeeeeeEEEcC
Confidence 3677888888777777774 356888888887777777653 3567777777666665443 335666666666
Q ss_pred CcccEEEEeCC--------eeEEEccEEEccccCc
Q psy683 88 KQVGVYFYDNG--------HGKLEDNDIFNHLYSG 114 (137)
Q Consensus 88 ~~~GI~v~~~~--------~g~ie~n~I~~n~~~G 114 (137)
.-.|..+.... ...+++|.+.+....+
T Consensus 80 ~l~~a~f~~a~~~~~~~l~~~~f~~~~l~~a~f~~ 114 (200)
T 2xt2_A 80 KMLGVNWTSAQWPSVKMEGALSFERCILNDSLFYG 114 (200)
T ss_dssp BCTTCBGGGSCCCSSCCTTSEEEESCBCTTCBCTT
T ss_pred EecCCccccCcccccccccceEEEcCcccccEEcc
Confidence 55554433221 2345555555444433
No 72
>2o04_A Pectate lyase, PL; hexasaccharide compound II, calciums; HET: ADA; 1.70A {Bacillus subtilis} PDB: 2nzm_A* 2o0v_A* 2o0w_A 2o17_A* 2o1d_A* 2bsp_A 1bn8_A 3krg_A*
Probab=76.60 E-value=26 Score=27.71 Aligned_cols=112 Identities=13% Similarity=0.042 Sum_probs=66.8
Q ss_pred cCCEEEecCCCcEEeccEEEcCC----------------CCc-EEEEeC-ceeEEEeeEEEeCCcCcEEEccC-------
Q psy683 20 LAGIQIRTSSDPIVRHNKIHHGQ----------------HGG-VYVHEK-GVGLIEENEVYANTLAGVWITTG------- 74 (137)
Q Consensus 20 ~~GI~v~~~a~~~i~~n~I~~~~----------------~~G-I~v~~~-~~~~i~~n~I~~n~~~Gv~v~~~------- 74 (137)
..+|.+....+.-|.+|++..+. ..| +-+... ...+|..|.|.+..+ +..+...
T Consensus 183 ~DaI~i~~s~nVWIDHcs~s~~~~~d~~~~~~~G~~~~~~Dgl~Di~~~s~~VTISnn~f~~h~k-~~LiG~sd~~~~d~ 261 (399)
T 2o04_A 183 YDNITINGGTHIWIDHCTFNDGSRPDSTSPKYYGRKYQHHDGQTDASNGANYITMSYNYYHDHDK-SSIFGSSDSKTSDD 261 (399)
T ss_dssp CCSEEEESCEEEEEESCEEECTTCCGGGSCEETTEECCCCCCSEEEETTCEEEEEESCEEEEEEE-CCEESCCTTCGGGT
T ss_pred CCeEEecCCCcEEEEeeeeecCCCccccccccccceeeccccceeeeccCCcEEEEeeEEcCCCc-eeEeCCCCCCcccc
Confidence 46788876667778888888652 123 234433 345677887776544 3444322
Q ss_pred --CccEEEeeEEEcCCcccEEEEeCCeeEEEccEEEcccc-------CcEEEecCCCeEEeceEEecC
Q psy683 75 --SAPVLRRNRIHSGKQVGVYFYDNGHGKLEDNDIFNHLY-------SGVQISNETTATLDACGLRRS 133 (137)
Q Consensus 75 --a~~~i~~n~I~~~~~~GI~v~~~~~g~ie~n~I~~n~~-------~Gi~v~~~a~p~l~~n~I~~~ 133 (137)
-..++.+|.+.+...-.=.+. .+..-+-+|.+++... .++.+..++...+++|.+...
T Consensus 262 g~~~vT~h~N~f~~~~~R~Pr~R-~G~~Hv~NN~~~n~~~~~~~~~~ya~g~~~~~~i~~e~N~F~~~ 328 (399)
T 2o04_A 262 GKLKITLHHNRYKNIVQAAPRVR-FGQVHVYNNYYEGSTSSSSYPFSYAWGIGKSSKIYAQNNVIDVP 328 (399)
T ss_dssp TCCCEEEESCEEEEEEECTTEES-SCEEEEESCEEECCTTCSSSCCCCSEEECTTCEEEEESCEEECT
T ss_pred CceeEEEECcEecCCcccCCCcc-cceEEEEcceEECCCCCCccceeeEeccCCCcEEEEEceEEECC
Confidence 157777777765443222221 2344566777765532 467777777788888887764
No 73
>1vbl_A Pectate lyase 47; PL 47, thermostable, bacillus subtilis, pectin, calcium ION; 1.91A {Bacillus SP}
Probab=74.02 E-value=32 Score=27.42 Aligned_cols=21 Identities=33% Similarity=0.452 Sum_probs=11.9
Q ss_pred CCEEEecCCCcEEeccEEEcC
Q psy683 21 AGIQIRTSSDPIVRHNKIHHG 41 (137)
Q Consensus 21 ~GI~v~~~a~~~i~~n~I~~~ 41 (137)
.+|.+....+.-|.+|++..+
T Consensus 190 DaI~i~~s~nVWIDHcs~s~~ 210 (416)
T 1vbl_A 190 DSISIEGSSHIWIDHNTFTDG 210 (416)
T ss_dssp CSEEEESCEEEEEESCEEECT
T ss_pred ceEEecCCceEEEEccEEecC
Confidence 456665555555666666643
No 74
>2x6w_A Tail spike protein; viral protein, beta-helix, hydrolase; HET: RAM GLC GLA NAG NDG; 1.35A {Enterobacteria phage HK620} PDB: 2vji_A 2vjj_A* 2x85_A* 2x6x_A* 2x6y_A*
Probab=72.93 E-value=4.3 Score=34.06 Aligned_cols=58 Identities=9% Similarity=0.022 Sum_probs=39.0
Q ss_pred EEeeEEEcC-ccCCEEE---ecCCCcEEeccE----EEcC-CCCcEEEEeCceeEEEeeEEEeCCcCcEEE-ccCC
Q psy683 10 VLMMVHCGN-ALAGIQI---RTSSDPIVRHNK----IHHG-QHGGVYVHEKGVGLIEENEVYANTLAGVWI-TTGS 75 (137)
Q Consensus 10 i~~c~I~~~-~~~GI~v---~~~a~~~i~~n~----I~~~-~~~GI~v~~~~~~~i~~n~I~~n~~~Gv~v-~~~a 75 (137)
|++.+|.+. ....|.+ ....+.+|++++ |... ...|| .+|++|.|. +..+.|.+ ..+.
T Consensus 187 I~GITi~NSDP~w~I~iG~~~~c~NVtI~nvtfi~aI~sspNTDGI-------V~I~nc~I~-tGDDCIAI~KSGs 254 (600)
T 2x6w_A 187 VTGITFQNGDVTWAITLGWNGYGSNCYVRKCRFINLVNSSVNADHS-------TVYVNCPYS-GVESCYFSMSSSF 254 (600)
T ss_dssp EESCEEESCCCSCSEEECBTTBEEEEEEESCEEECCCCCSSCCCEE-------EEEECSSSE-EEESCEEECCCTT
T ss_pred EeCeEEECCCCccEEEeCCCCCcccEEEeCeEEcceEecCCCCCEE-------EEEEeeEEe-cCCcEEEEecCCC
Confidence 566666666 7777777 667778888888 6541 12576 667777775 44677888 6554
No 75
>1pe9_A Pectate lyase A; parallel beta helix; 1.60A {Erwinia chrysanthemi} SCOP: b.80.1.1 PDB: 1ooc_A 1jta_A 1jrg_A
Probab=64.56 E-value=48 Score=25.81 Aligned_cols=22 Identities=18% Similarity=0.338 Sum_probs=12.9
Q ss_pred cCCEEEec-CCCcEEeccEEEcC
Q psy683 20 LAGIQIRT-SSDPIVRHNKIHHG 41 (137)
Q Consensus 20 ~~GI~v~~-~a~~~i~~n~I~~~ 41 (137)
..+|.+.. ..+.-|.+|++..+
T Consensus 143 ~DaI~i~~~s~nVWIDHcs~s~~ 165 (361)
T 1pe9_A 143 WDAMNITNGAHHVWIDHVTISDG 165 (361)
T ss_dssp CCSEEEETTCEEEEEESCEEECT
T ss_pred CceEEeecCCceEEEEccEeecc
Confidence 34666655 44556666666654
No 76
>1h80_A IOTA-carrageenase; hydrolase, IOTA-carrageenan double helix degradation; 1.6A {Alteromonas SP} SCOP: b.80.1.8 PDB: 1ktw_A* 3lmw_A
Probab=51.09 E-value=95 Score=24.97 Aligned_cols=72 Identities=11% Similarity=0.022 Sum_probs=43.4
Q ss_pred cEEEEeCceeEEEeeEEEeCC-cCc-EEEccCCccEEEeeEEEcCCcccEEEEeC-------C-----eeEEEccEEEcc
Q psy683 45 GVYVHEKGVGLIEENEVYANT-LAG-VWITTGSAPVLRRNRIHSGKQVGVYFYDN-------G-----HGKLEDNDIFNH 110 (137)
Q Consensus 45 GI~v~~~~~~~i~~n~I~~n~-~~G-v~v~~~a~~~i~~n~I~~~~~~GI~v~~~-------~-----~g~ie~n~I~~n 110 (137)
|+.+ .....+|+++.|.... ..| .......+.++++|.+.. +.||.+... . .-++++|.+.+.
T Consensus 169 Gi~i-~s~nV~I~n~~I~~gddgiGs~~~~~~~NV~V~n~~~~g--g~GIrIktg~d~IG~~~~g~v~NI~~~Ni~~~nv 245 (464)
T 1h80_A 169 GRLH-WSRNGIIERIKQNNALFGYGLIQTYGADNILFRNLHSEG--GIALRMETDNLLMKNYKQGGIRNIFADNIRCSKG 245 (464)
T ss_dssp TEEE-EEEEEEEEEEEEESCCTTCEEEEESEEEEEEEEEEEEES--SEEEEEECCCHHHHHHTCCEEEEEEEEEEEEESS
T ss_pred Ccee-eccCEEEeceEEecCCCeEEecccCCEeEEEEEeeEEEC--CCEEEEEeCCceeccCCCCcEEEEEEEeEEEECC
Confidence 4444 3445667888887653 124 334455677788888777 567777644 1 125777777665
Q ss_pred ccCcEEEecC
Q psy683 111 LYSGVQISNE 120 (137)
Q Consensus 111 ~~~Gi~v~~~ 120 (137)
.. +|.+...
T Consensus 246 ~~-~I~I~p~ 254 (464)
T 1h80_A 246 LA-AVMFGPH 254 (464)
T ss_dssp SE-EEEEECT
T ss_pred ce-eEEEeCC
Confidence 54 6777743
No 77
>1l0s_A Thermal hysteresis protein; LEFT-handed beta-helix, antifreeze protein, iodination; HET: TYI; 2.30A {Choristoneura fumiferana} SCOP: b.81.2.1 PDB: 1eww_A 1n4i_A
Probab=42.81 E-value=56 Score=19.97 Aligned_cols=14 Identities=7% Similarity=0.394 Sum_probs=7.6
Q ss_pred cCCCeEEeceEEec
Q psy683 119 NETTATLDACGLRR 132 (137)
Q Consensus 119 ~~a~p~l~~n~I~~ 132 (137)
..+...|.+|.++.
T Consensus 76 ps~ac~isgctl~a 89 (90)
T 1l0s_A 76 PSAACKISGCTFSA 89 (90)
T ss_dssp CCTTCEEESCEEEE
T ss_pred CCcccEEeceEEec
Confidence 44555666665543
No 78
>2x3h_A K5 lyase, K5A lyase; bacteriophage, glycosaminoglycan; 1.60A {Enterobacteria phage k1-5}
Probab=39.55 E-value=1.4e+02 Score=23.43 Aligned_cols=87 Identities=14% Similarity=0.189 Sum_probs=47.6
Q ss_pred cEEEEeCceeEEEeeEEEeCCcCcEEEcc---CCcc---EEEeeE-----EEcCCcccEEEEeCCeeEEEccEEEccc--
Q psy683 45 GVYVHEKGVGLIEENEVYANTLAGVWITT---GSAP---VLRRNR-----IHSGKQVGVYFYDNGHGKLEDNDIFNHL-- 111 (137)
Q Consensus 45 GI~v~~~~~~~i~~n~I~~n~~~Gv~v~~---~a~~---~i~~n~-----I~~~~~~GI~v~~~~~g~ie~n~I~~n~-- 111 (137)
=|.+.+.....+.+-++.+..++|..+.. .+-| .+++-+ .-.|+..|..+.+++...+-++.|..|.
T Consensus 159 qvs~~gg~dvsv~~i~fsn~~g~gfsliayp~~~~p~g~~i~~irg~y~g~a~nk~agcvl~dss~nslid~via~nypq 238 (542)
T 2x3h_A 159 QVSLAGGSDVTVSDVNFSNVKGTGFSLIAYPNDAPPDGLMIKGIRGSYSGYATNKAAGCVLADSSVNSLIDNVIAKNYPQ 238 (542)
T ss_dssp SEEEESCEEEEEEEEEEEEECSBEEEEEEECSSSCCBSCEEEEEEEEECSCCTTCSEEEEEEESCBSCEEEEEEEESCCT
T ss_pred EEEecCCCcceEeeeeeeecCCCceeEEEcCCCCCCCceEEeccccceeccccccccceEEeccchhhhhhhhhhhcCCc
Confidence 45555555666666666666666655431 2222 222221 1235566666666666666677766663
Q ss_pred cCcEEEecCCCeEEeceEEe
Q psy683 112 YSGVQISNETTATLDACGLR 131 (137)
Q Consensus 112 ~~Gi~v~~~a~p~l~~n~I~ 131 (137)
...+.++..+.--|..|.|-
T Consensus 239 fgavelk~~a~ynivsnvig 258 (542)
T 2x3h_A 239 FGAVELKGTASYNIVSNVIG 258 (542)
T ss_dssp TEEEEEETTCBSCEEEEEEE
T ss_pred cceEEeecceeeehhhhhhh
Confidence 33566666665555555553
No 79
>2x6w_A Tail spike protein; viral protein, beta-helix, hydrolase; HET: RAM GLC GLA NAG NDG; 1.35A {Enterobacteria phage HK620} PDB: 2vji_A 2vjj_A* 2x85_A* 2x6x_A* 2x6y_A*
Probab=39.09 E-value=31 Score=28.96 Aligned_cols=76 Identities=7% Similarity=-0.074 Sum_probs=41.8
Q ss_pred EeccEEEcC-CCCcEEE---EeCceeEEEeeE----EEe-CCcCcEEEccCCccEEEeeEEEcCCcccEEE-EeCCe-e-
Q psy683 33 VRHNKIHHG-QHGGVYV---HEKGVGLIEENE----VYA-NTLAGVWITTGSAPVLRRNRIHSGKQVGVYF-YDNGH-G- 100 (137)
Q Consensus 33 i~~n~I~~~-~~~GI~v---~~~~~~~i~~n~----I~~-n~~~Gv~v~~~a~~~i~~n~I~~~~~~GI~v-~~~~~-g- 100 (137)
|++-++.++ ...-+.+ ......+|.++. |.. ...+|| .+|++|.|..+ +.+|.+ ..+.. +
T Consensus 187 I~GITi~NSDP~w~I~iG~~~~c~NVtI~nvtfi~aI~sspNTDGI-------V~I~nc~I~tG-DDCIAI~KSGs~~ni 258 (600)
T 2x6w_A 187 VTGITFQNGDVTWAITLGWNGYGSNCYVRKCRFINLVNSSVNADHS-------TVYVNCPYSGV-ESCYFSMSSSFARNI 258 (600)
T ss_dssp EESCEEESCCCSCSEEECBTTBEEEEEEESCEEECCCCCSSCCCEE-------EEEECSSSEEE-ESCEEECCCTTHHHH
T ss_pred EeCeEEECCCCccEEEeCCCCCcccEEEeCeEEcceEecCCCCCEE-------EEEEeeEEecC-CcEEEEecCCCcCCe
Confidence 555666666 5566666 555556677777 543 112465 56677776654 567777 54432 1
Q ss_pred EEEccEEEccccCcEEEec
Q psy683 101 KLEDNDIFNHLYSGVQISN 119 (137)
Q Consensus 101 ~ie~n~I~~n~~~Gi~v~~ 119 (137)
.++ +......||.+..
T Consensus 259 ~~e---~~~~GHgGISIGS 274 (600)
T 2x6w_A 259 ACS---VQLHQHDTFYRGS 274 (600)
T ss_dssp EEE---EEECSSSEEEESC
T ss_pred EEE---EEcCCCCcEEecc
Confidence 222 3334444666643
No 80
>2yuh_A Tubulin-specific chaperone C; microtubule, beta-tubulin folding, beta-roll, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=33.57 E-value=59 Score=22.56 Aligned_cols=26 Identities=27% Similarity=0.408 Sum_probs=20.6
Q ss_pred eeEEEcCCcccEEEEeCCeeEEEccE
Q psy683 81 RNRIHSGKQVGVYFYDNGHGKLEDND 106 (137)
Q Consensus 81 ~n~I~~~~~~GI~v~~~~~g~ie~n~ 106 (137)
.-+|++..+.=||+.-..+++||+|.
T Consensus 87 Qlri~~~~~~~~yL~~~s~PIIE~c~ 112 (179)
T 2yuh_A 87 QLRIHSTKDTRIFLQVTSRAIVEDCS 112 (179)
T ss_dssp EEEEESCBSCEEECCCSSEEEEESCB
T ss_pred EEEEeccCCeEEEEeCCCCcEEEcCC
Confidence 34778888888888888889998875
No 81
>2w7z_A EFSQNR, pentapeptide repeat family protein; glutaraldehyde, gyrase inhibitor, cyclic pentylation, chemic modification; HET: LP6; 1.60A {Enterococcus faecalis}
Probab=29.97 E-value=1.3e+02 Score=20.70 Aligned_cols=10 Identities=10% Similarity=-0.044 Sum_probs=3.9
Q ss_pred EEeeEEEcCC
Q psy683 79 LRRNRIHSGK 88 (137)
Q Consensus 79 i~~n~I~~~~ 88 (137)
+.+..+.++.
T Consensus 112 l~~~~f~~~~ 121 (214)
T 2w7z_A 112 LXDCLFEDCX 121 (214)
T ss_dssp EEEEEEESCB
T ss_pred eeeeEEeCCC
Confidence 3334433333
Done!