Query psy6837
Match_columns 122
No_of_seqs 223 out of 1009
Neff 9.0
Searched_HMMs 29240
Date Fri Aug 16 19:42:02 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy6837.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/6837hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2ee0_A Protocadherin-9; Ca dom 100.0 1.4E-31 4.6E-36 168.8 8.0 103 20-122 2-113 (114)
2 2yst_A Protocadherin-7; BH-PCD 100.0 7.2E-31 2.5E-35 166.5 7.8 103 20-122 2-114 (119)
3 3mvs_A Cadherin-23, otocadheri 100.0 6.5E-28 2.2E-32 166.1 17.2 118 4-122 80-206 (210)
4 2a4e_A Cadherin-11; dimer, cal 100.0 8.8E-28 3E-32 166.1 16.8 105 17-122 92-209 (215)
5 3ppe_A Vascular endothelial ca 100.0 2E-27 6.8E-32 163.0 17.5 97 16-114 88-191 (203)
6 3qrb_A Cadherin-1; cell adhesi 100.0 1.1E-27 3.6E-32 165.3 15.6 99 17-115 93-202 (213)
7 3k5r_A Cadherin 13; mouse, str 100.0 2.3E-27 7.9E-32 164.1 15.6 99 17-115 93-207 (218)
8 2qvi_A Cadherin-2; beta barrel 100.0 1.7E-27 5.9E-32 164.6 12.7 96 17-112 93-198 (215)
9 2x2u_A Proto-oncogene tyrosine 100.0 6.7E-28 2.3E-32 169.7 10.6 106 17-122 114-237 (246)
10 3lnd_A CDH6 protein, cadherin 99.9 1.8E-27 6.3E-32 163.5 12.4 95 17-112 91-191 (207)
11 4apx_B Protocadherin-15, otoca 99.9 5.6E-26 1.9E-30 159.6 14.9 97 17-113 112-221 (242)
12 2a62_A Cadherin-8; extracellul 99.9 2.3E-25 7.7E-30 162.1 13.8 98 16-113 199-303 (322)
13 2a62_A Cadherin-8; extracellul 99.9 9.8E-26 3.4E-30 164.0 11.9 119 3-122 72-208 (322)
14 3ubf_A Neural-cadherin; cell a 99.9 1.7E-24 5.8E-29 156.9 15.7 96 16-111 90-188 (316)
15 3ubf_A Neural-cadherin; cell a 99.9 3.2E-24 1.1E-28 155.4 16.9 104 17-122 200-312 (316)
16 3ubh_A Neural-cadherin; cell a 99.9 3E-24 1E-28 160.8 16.5 109 3-115 292-407 (419)
17 1l3w_A EP-cadherin, C-cadherin 99.9 1.8E-24 6.2E-29 166.6 14.2 107 16-122 98-220 (546)
18 3q2v_A Cadherin-1; cell adhesi 99.9 6.4E-24 2.2E-28 163.6 16.8 107 15-122 316-434 (550)
19 3q2v_A Cadherin-1; cell adhesi 99.9 3E-24 1E-28 165.5 14.6 120 3-122 75-214 (550)
20 3q2w_A Cadherin-2; cell adhesi 99.9 2.1E-24 7.3E-29 166.5 13.7 108 3-110 75-196 (559)
21 3q2w_A Cadherin-2; cell adhesi 99.9 2.1E-23 7.3E-28 160.9 18.2 106 16-122 323-439 (559)
22 1q55_A EP-cadherin, C-cadherin 99.9 1.5E-23 5E-28 168.8 14.2 119 4-122 231-369 (880)
23 1l3w_A EP-cadherin, C-cadherin 99.9 9.3E-24 3.2E-28 162.6 10.8 100 15-115 322-427 (546)
24 3ubh_A Neural-cadherin; cell a 99.9 2.4E-22 8.2E-27 150.5 15.2 104 17-122 205-317 (419)
25 1q55_A EP-cadherin, C-cadherin 99.9 6.3E-23 2.2E-27 165.1 10.6 100 15-115 471-576 (880)
26 2yqg_A Desmoglein-2, HDGC; cad 99.9 3.5E-22 1.2E-26 127.1 6.8 97 25-122 5-113 (123)
27 3mvs_A Cadherin-23, otocadheri 99.9 1.4E-21 4.7E-26 134.4 8.1 95 27-122 3-102 (210)
28 1zvn_A Mn-cadherin; strand dim 99.9 1E-20 3.4E-25 116.2 10.6 77 37-114 6-87 (99)
29 3k6d_A T-cadherin; cell adhesi 99.8 9.7E-21 3.3E-25 116.3 9.9 77 37-115 5-88 (99)
30 1zxk_A Cadherin-8; strand dime 99.8 1.4E-20 5E-25 115.3 9.7 76 37-113 5-85 (98)
31 2omz_B Epithelial-cadherin; le 99.8 1.2E-20 4E-25 117.1 8.7 84 38-122 10-105 (105)
32 3k6f_A T-cadherin; cell adhesi 99.8 5.3E-20 1.8E-24 113.1 11.1 76 38-115 7-89 (100)
33 3k6i_A T-cadherin; cell adhesi 99.8 8.4E-20 2.9E-24 112.0 11.9 76 38-115 6-88 (99)
34 1ncg_A N-cadherin; cell adhesi 99.8 8.3E-20 2.8E-24 114.0 8.4 86 36-122 6-103 (110)
35 2qvi_A Cadherin-2; beta barrel 99.7 7.6E-17 2.6E-21 111.2 11.4 84 38-122 6-101 (215)
36 2x2u_A Proto-oncogene tyrosine 99.7 1.4E-18 4.8E-23 122.1 2.5 92 31-122 2-122 (246)
37 3qrb_A Cadherin-1; cell adhesi 99.7 1.3E-16 4.4E-21 109.7 10.3 85 37-122 5-101 (213)
38 2a4e_A Cadherin-11; dimer, cal 99.7 2.5E-16 8.4E-21 108.6 11.6 86 36-122 5-100 (215)
39 1wyj_A Protocadherin beta 14; 99.7 4.8E-18 1.6E-22 108.3 2.6 88 34-122 10-108 (125)
40 3k5r_A Cadherin 13; mouse, str 99.7 4.7E-16 1.6E-20 107.3 9.8 83 38-122 7-101 (218)
41 3ppe_A Vascular endothelial ca 99.6 2.7E-15 9.1E-20 102.5 11.4 84 37-122 5-97 (203)
42 3lnd_A CDH6 protein, cadherin 99.6 4E-16 1.4E-20 106.9 5.7 84 38-122 6-99 (207)
43 1wuz_A Pcdha4 protein, CNR-EC1 99.6 2.4E-16 8.3E-21 97.2 0.5 87 35-122 3-100 (103)
44 4apx_B Protocadherin-15, otoca 99.2 4.2E-11 1.4E-15 83.8 8.6 88 35-122 20-120 (242)
45 1wyj_A Protocadherin beta 14; 98.0 9.6E-07 3.3E-11 55.7 0.2 25 16-40 99-123 (125)
46 1op4_A Neural-cadherin; beta s 96.5 0.037 1.3E-06 36.0 9.3 79 27-109 31-109 (159)
47 2yhg_A SDE_182CT, cellulose-bi 95.9 0.078 2.7E-06 39.8 9.6 57 57-115 365-427 (437)
48 2jtd_A Myomesin-1, skelemin; i 84.7 5.4 0.00019 25.0 8.9 81 34-119 42-128 (142)
49 3pdd_A Glycoside hydrolase, fa 83.1 7.7 0.00026 25.4 14.8 93 3-108 64-163 (190)
50 3rb5_A Na/Ca exchange protein; 79.1 14 0.00049 26.1 10.0 67 3-72 92-164 (298)
51 3pe9_A Fibronectin(III)-like m 79.0 7.6 0.00026 22.8 6.5 48 49-108 18-71 (98)
52 2kpn_A Bacillolysin; solution 66.9 7.7 0.00026 23.1 3.7 35 87-121 48-85 (103)
53 2y72_A Collagenase, collagenas 65.7 12 0.00042 20.9 4.3 55 57-120 27-84 (85)
54 2yrl_A KIAA1837 protein; PKD d 60.5 15 0.00051 21.4 4.1 54 60-119 34-91 (102)
55 1x50_A Galectin-4; GAL-BIND le 59.3 32 0.0011 22.0 9.0 79 29-108 20-117 (164)
56 3us9_A Sodium/calcium exchange 47.5 71 0.0024 22.5 12.5 70 15-89 127-201 (295)
57 1e09_A PRU AV 1; allergen, maj 46.2 52 0.0018 20.5 6.2 36 38-74 55-90 (159)
58 2yro_A Galectin-8; GAL-BIND le 44.9 56 0.0019 20.5 9.0 73 35-108 17-107 (155)
59 3knb_B Obscurin-like protein 1 44.3 43 0.0015 19.0 4.5 72 29-108 13-90 (107)
60 3knb_A Titin; IG-like, titin, 41.4 46 0.0016 18.6 6.1 85 29-121 5-99 (100)
61 1row_A SSP-19, MSP-domain prot 40.6 42 0.0014 19.9 3.9 25 62-86 28-52 (109)
62 2wql_A Major allergen DAU C 1; 40.0 68 0.0023 20.1 5.3 38 35-73 52-89 (154)
63 3gin_A Sodium/calcium exchange 40.0 70 0.0024 20.3 10.5 53 17-72 11-65 (160)
64 1k85_A Chitinase A1; fibronect 38.6 47 0.0016 17.8 3.8 14 95-108 59-72 (88)
65 3jrs_A PYL1, putative uncharac 37.6 83 0.0028 21.0 5.3 34 39-73 105-138 (208)
66 2qvk_A CBD2, sodium/calcium ex 36.4 91 0.0031 20.6 6.9 45 26-72 2-47 (192)
67 1m1s_A WR4; structural genomic 36.0 52 0.0018 19.9 3.8 25 62-86 36-60 (116)
68 4a8u_A Major pollen allergen B 35.6 60 0.0021 20.4 4.3 35 38-73 55-89 (159)
69 1b4r_A Protein (PKD1_human); P 35.6 50 0.0017 18.5 3.5 22 94-115 51-72 (80)
70 2vjg_A Major allergen DAU C 1; 33.2 80 0.0027 19.7 4.5 34 39-73 56-89 (154)
71 3oqu_A Abscisic acid receptor 32.3 90 0.0031 20.8 4.8 33 39-72 101-133 (205)
72 3oji_A Abscisic acid receptor 32.0 1.1E+02 0.0036 20.2 5.1 34 39-73 85-118 (189)
73 1jh4_B PAIP1, polyadenylate-bi 30.9 20 0.00068 15.7 0.9 14 25-38 6-19 (26)
74 3kl1_A PYL2, putative uncharac 30.7 81 0.0028 20.6 4.4 34 39-73 85-118 (190)
75 3rt2_A Abscisic acid receptor 29.8 1E+02 0.0036 19.9 4.8 33 39-72 77-109 (183)
76 1tw0_A Pathogenesis-related cl 29.3 73 0.0025 19.8 3.9 23 50-73 66-88 (157)
77 3ie5_A Phenolic oxidative coup 29.1 72 0.0025 20.3 3.8 36 37-73 61-96 (165)
78 2zhn_A Galectin-9; beta sandwi 28.6 1.1E+02 0.0036 18.9 9.6 74 34-108 14-107 (148)
79 1msp_A MSP, major sperm protei 28.6 82 0.0028 19.0 3.9 24 62-85 38-61 (126)
80 2lv4_A Putative outer membrane 26.9 34 0.0012 21.2 1.8 20 11-30 61-80 (146)
81 1z9l_A Vesicle-associated memb 26.8 72 0.0025 19.1 3.4 33 52-85 31-63 (128)
82 3k3k_A Abscisic acid receptor 26.1 1E+02 0.0035 20.6 4.3 34 39-73 101-134 (211)
83 2qim_A PR10.2B; trans-zeatin, 26.1 96 0.0033 19.2 4.0 24 49-73 66-89 (158)
84 1icx_A Protein LLR18A, LLPR10. 25.2 70 0.0024 19.8 3.2 35 38-73 54-88 (155)
85 2flh_A Cytokinin-specific bind 25.2 1.3E+02 0.0043 18.7 4.4 34 38-73 55-89 (155)
86 3ima_B Cysteine proteinase inh 24.0 78 0.0027 17.8 3.0 23 97-119 52-74 (91)
87 1wic_A Hypothetical protein ri 23.6 1.1E+02 0.0038 19.1 3.9 25 62-86 48-72 (152)
88 2dmk_A Midline 2 isoform 2; mi 22.8 83 0.0028 18.3 3.1 14 95-108 88-101 (127)
89 2cri_A Vesicle-associated memb 22.1 95 0.0032 19.2 3.3 24 62-85 44-67 (147)
90 2vq5_A S-norcoclaurine synthas 21.8 1.4E+02 0.0046 19.7 4.2 34 39-73 82-115 (201)
91 1x4x_A Fibronectin type-III do 21.4 1.2E+02 0.0039 16.8 4.0 14 95-108 69-82 (106)
92 3zxf_A Galectin-7; sugar bindi 21.4 1.5E+02 0.005 18.0 6.0 78 30-108 1-97 (138)
93 3ead_A Na/Ca exchange protein; 21.1 1.5E+02 0.0051 18.0 10.3 43 28-72 3-46 (137)
94 2i9y_A Major latex protein-lik 21.0 1.1E+02 0.0036 19.3 3.4 21 52-73 83-103 (166)
95 4g06_A Uncharacterized protein 20.2 66 0.0023 18.1 2.0 16 17-32 31-46 (79)
96 2ee2_A Contactin-1; neural cel 20.1 1.3E+02 0.0044 16.9 4.0 14 95-108 82-95 (119)
No 1
>2ee0_A Protocadherin-9; Ca domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.97 E-value=1.4e-31 Score=168.80 Aligned_cols=103 Identities=30% Similarity=0.453 Sum_probs=92.5
Q ss_pred EEEEecCCCCCcccCCceEEEEeCCCCCCcEEEEEEEECCCC--CCcEEEEEEcC----CCCcEEEECCccEEEEcccCC
Q psy6837 20 LRILDRNDSPPSFADFHTEYTISEDVPVGTLVAKVKAIDPDL--PGTIAYSLVAG----DEGKFVLESSSGNLKLKDTLD 93 (122)
Q Consensus 20 i~V~dvNdn~P~f~~~~~~~~v~E~~~~g~~v~~~~a~D~D~--~~~i~y~l~~~----~~~~f~i~~~~G~i~~~~~Ld 93 (122)
|+|.|+|||+|.|.+..|.+.|+|++++|+.++++.|+|+|. |+.++|+|.+. ..++|.|++.+|.|++.++||
T Consensus 2 ~~V~DvNDn~P~F~~~~y~~~v~En~~~Gt~v~~v~A~D~D~g~n~~i~Y~i~~~~~~~~~~~F~Id~~tG~I~~~~~LD 81 (114)
T 2ee0_A 2 SSGSSGNDNRPVFKEGQVEVHIPENAPVGTSVIQLHATDADIGSNAEIRYIFGAQVAPATKRLFALNNTTGLITVQRSLD 81 (114)
T ss_dssp CCCCCCCCCCCCCSCSEEEEEEETTCCTTCEEEECCCCSCSSCCCSCCEEEECSSCCHHHHHHEEECTTTCEEEECSCCC
T ss_pred CeEeeCCCCCCCcCCCcEEEEEECCCCCCCEEEEEEEEeCCCCCCcEEEEEEccCCCCCccceEEEeCCeeEEEECccCC
Confidence 568999999999999999999999999999999999999998 88999999863 246899999999999999999
Q ss_pred ccCCCEEEEEEEEEeCCCCcee---EEEEEcC
Q psy6837 94 REQKDKYRVQVRASDGVQSADV---VLTILNC 122 (122)
Q Consensus 94 ~e~~~~~~l~v~a~D~g~~~~~---~v~I~d~ 122 (122)
||....|.|.|.|+|+|.|+.+ +|+|.|+
T Consensus 82 ~E~~~~y~l~V~A~D~g~~~~~~~v~I~V~Dv 113 (114)
T 2ee0_A 82 REETAIHKVTVLASDGSSTPARATVTINVTDV 113 (114)
T ss_dssp TTTCSEEEEEEEEESSSSSCEEEEEEEEEECC
T ss_pred cccCcEEEEEEEEEECCCCceEEEEEEEEEEC
Confidence 9999999999999997776533 6666664
No 2
>2yst_A Protocadherin-7; BH-PCDH, beta-sandwich, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.97 E-value=7.2e-31 Score=166.51 Aligned_cols=103 Identities=30% Similarity=0.390 Sum_probs=93.0
Q ss_pred EEEEecCCCCCcccCCceEEEEeCCCCCCcEEEEEEEECCCC--CCcEEEEEEcCCC---CcEEEECCccEEEEcccCCc
Q psy6837 20 LRILDRNDSPPSFADFHTEYTISEDVPVGTLVAKVKAIDPDL--PGTIAYSLVAGDE---GKFVLESSSGNLKLKDTLDR 94 (122)
Q Consensus 20 i~V~dvNdn~P~f~~~~~~~~v~E~~~~g~~v~~~~a~D~D~--~~~i~y~l~~~~~---~~f~i~~~~G~i~~~~~Ld~ 94 (122)
++|.|+|||+|.|.+..|.+.|+|++++|+.++++.|+|+|. |+.++|+|.++.. ++|.|++.+|.|+++++|||
T Consensus 2 ~~V~DvNDn~P~F~~~~y~~~v~En~~~Gt~v~~v~A~D~D~g~n~~i~Y~i~~~~~~~~~~F~Id~~tG~I~~~~~LD~ 81 (119)
T 2yst_A 2 SSGSSGNDNSPRFEKSVYEADLAENSAPGTPILQLRAADLDVGVNGQIEYVFGAATESVRRLLRLDETSGWLSVLHRIDR 81 (119)
T ss_dssp CCCCCSCCCCCCCSSSEEEEEEETTCCTTCEEEECCCCCSSSSCCSCCCCEECSCCTTHHHHEEECTTTCEEEECSCCCT
T ss_pred CeEecCCCCCCCcCCCcEEEEEECCCCCCCEEEEEEEEeCCCCCCCeEEEEEecCCCccccEEEEeCCceEEEECccCCc
Confidence 468999999999999999999999999999999999999998 8899999997642 68999999999999999999
Q ss_pred cCCCEEEEEEEEEeCCCCcee-----EEEEEcC
Q psy6837 95 EQKDKYRVQVRASDGVQSADV-----VLTILNC 122 (122)
Q Consensus 95 e~~~~~~l~v~a~D~g~~~~~-----~v~I~d~ 122 (122)
|....|.|.|.|+|+|.|+++ +|+|.|+
T Consensus 82 E~~~~y~l~V~A~D~g~p~~s~~~~v~I~V~Dv 114 (119)
T 2yst_A 82 EEVNQLRFTVMARDRGQPPKTDKATVVLNIKDE 114 (119)
T ss_dssp TTCSEEEEEEEECCSBTTBCCEEEEEEEEEECS
T ss_pred ccCCEEEEEEEEEECCCCCcEEEEEEEEEEEec
Confidence 999999999999998877543 5666664
No 3
>3mvs_A Cadherin-23, otocadherin; adhesion, extracellular domain, cell adhesion; 1.10A {Mus musculus} PDB: 4apx_A* 2whv_A 2wcp_A* 4aq8_A 4axw_A* 4aqe_A* 4aqa_A* 2wd0_A* 2wbx_A
Probab=99.96 E-value=6.5e-28 Score=166.08 Aligned_cols=118 Identities=30% Similarity=0.468 Sum_probs=100.3
Q ss_pred EEEEEEcCCCce-eEEEEEEEecCCCCCcccCCceEEEEeCCCCCCcEEEEEEEECCCC--CCcEEEEEEcCCCCcEEEE
Q psy6837 4 LTLNLAHKFGVI-GCVQLRILDRNDSPPSFADFHTEYTISEDVPVGTLVAKVKAIDPDL--PGTIAYSLVAGDEGKFVLE 80 (122)
Q Consensus 4 l~~~~~~~~g~~-~~v~i~V~dvNdn~P~f~~~~~~~~v~E~~~~g~~v~~~~a~D~D~--~~~i~y~l~~~~~~~f~i~ 80 (122)
|++.+.+..+.. ..+.|.|.|+|||+|.|.+..|.+.|+|+.++|+.++++.|+|+|. |+.++|+|..+ .++|.|+
T Consensus 80 l~v~a~D~~~~~~~~v~I~V~DvNDn~P~f~~~~y~~~v~E~~~~gt~v~~v~A~D~D~g~n~~v~Y~i~~~-~~~F~Id 158 (210)
T 3mvs_A 80 VEFSVSDHQGVITRKVNIQVGDVNDNAPTFHNQPYSVRIPENTPVGTPIFIVNATDPDLGAGGSVLYSFQPP-SPFFAID 158 (210)
T ss_dssp EEEEEECSSCEEEEEEEEEEECCCCCCCEECSCSEEEEEETTCCTTCEEEECCEECCSSGGGGCEEEEESSC-CSSEEEC
T ss_pred EEEEEEeCCCCEEEEEEEEEEeCCCCCCcCCCceEEEEEECCCCCCCEEEEEEEEeCCCCCCceEEEEEeCC-CCCEEEe
Confidence 444444433322 2899999999999999999999999999999999999999999998 88999999854 4789999
Q ss_pred CCccEEEEcccCCccCCCEEEEEEEEEeCC-CCcee-----EEEEEcC
Q psy6837 81 SSSGNLKLKDTLDREQKDKYRVQVRASDGV-QSADV-----VLTILNC 122 (122)
Q Consensus 81 ~~~G~i~~~~~Ld~e~~~~~~l~v~a~D~g-~~~~~-----~v~I~d~ 122 (122)
+.+|.|++.++||||....|.|.|.|+|+| .|+++ +|+|.|+
T Consensus 159 ~~tG~i~~~~~LD~E~~~~y~l~V~a~D~g~~~~~s~~~~v~I~V~Dv 206 (210)
T 3mvs_A 159 SARGIVTVIQELDYEVTQAYQLTVNATDQDKTRPLSTLANLAIIITDM 206 (210)
T ss_dssp TTTCEEEECSCCCTTTCSEEEEEEEEEECCSSSCCEEEEEEEEEEECC
T ss_pred CCcEEEEECCcCCCcccceEEEEEEEEECCCCCCCEEEEEEEEEEEcc
Confidence 999999999999999999999999999976 44333 5666664
No 4
>2a4e_A Cadherin-11; dimer, calcium binding, cell adhesion; 3.20A {Mus musculus}
Probab=99.96 E-value=8.8e-28 Score=166.12 Aligned_cols=105 Identities=29% Similarity=0.434 Sum_probs=94.0
Q ss_pred EEEEEEEecCCCCCcccCCceEEEEeCCCCCCcEEEEEEEECCCC-----CCcEEEEEEcCCCCcEEEECCccEEEEc-c
Q psy6837 17 CVQLRILDRNDSPPSFADFHTEYTISEDVPVGTLVAKVKAIDPDL-----PGTIAYSLVAGDEGKFVLESSSGNLKLK-D 90 (122)
Q Consensus 17 ~v~i~V~dvNdn~P~f~~~~~~~~v~E~~~~g~~v~~~~a~D~D~-----~~~i~y~l~~~~~~~f~i~~~~G~i~~~-~ 90 (122)
.+.|+|.|+|||+|.|.+..|.+.|+|++++|+.|+++.|+|+|. |+.++|+|.++. ++|.|++.+|.|++. +
T Consensus 92 ~v~I~V~DvNDn~P~F~~~~y~~~v~E~~~~Gt~v~~v~A~D~D~~~~G~n~~i~Y~i~~~~-~~F~Id~~tG~I~~~~~ 170 (215)
T 2a4e_A 92 EFIVKVQDINDNPPEFLHEIYHANVPERSNVGTSVIQVTASDADDPTYGNSAKLVYSILEGQ-PYFSVEAQTGIIRTALP 170 (215)
T ss_dssp EEEEEEECCCCCCCEESSSSEEEEEETTCCTTCEEEECCEECSSCTTTCSSSCCEEEEEEST-TTEEECTTTCEEEECSS
T ss_pred EEEEEEeeCCCCCCCccCCceEEEEECCCCCCCEEEEEEEEECCCCCCCCceEEEEEEeCCC-CcEEEeCCccEEEEccc
Confidence 899999999999999999999999999999999999999999994 678999999764 689999999999999 9
Q ss_pred cCCccCCCEEEEEEEEEeCCCC--cee-----EEEEEcC
Q psy6837 91 TLDREQKDKYRVQVRASDGVQS--ADV-----VLTILNC 122 (122)
Q Consensus 91 ~Ld~e~~~~~~l~v~a~D~g~~--~~~-----~v~I~d~ 122 (122)
+||||....|.|.|.|+|+|.| +++ +|+|.|+
T Consensus 171 ~LD~E~~~~y~l~V~A~D~g~~~~~~s~~~~v~I~V~Dv 209 (215)
T 2a4e_A 171 NMDREAKEEYHVVIQAKDMGGHMGGLSGTTKVTITLTDD 209 (215)
T ss_dssp CCCSSSCSEEEEEEEEETTTTCTTCCEEEEEEEEEEEC-
T ss_pred CCCcccCCEEEEEEEEEECCCCCCCceeEEEEEEEEEEC
Confidence 9999999999999999998765 222 5666664
No 5
>3ppe_A Vascular endothelial cadherin; extracellular cadherin (EC) domain, beta barrel, IG-domain L domain swapped dimer interface; 2.10A {Gallus gallus}
Probab=99.96 E-value=2e-27 Score=162.99 Aligned_cols=97 Identities=29% Similarity=0.444 Sum_probs=90.1
Q ss_pred eEEEEEEEecCCCCCcccCCceEEEEeCCCCCCcEEEEEEEECCCC-----CCcEEEEEEcCCCCcEEEECCccEEEEc-
Q psy6837 16 GCVQLRILDRNDSPPSFADFHTEYTISEDVPVGTLVAKVKAIDPDL-----PGTIAYSLVAGDEGKFVLESSSGNLKLK- 89 (122)
Q Consensus 16 ~~v~i~V~dvNdn~P~f~~~~~~~~v~E~~~~g~~v~~~~a~D~D~-----~~~i~y~l~~~~~~~f~i~~~~G~i~~~- 89 (122)
..+.|.|.|+|||+|.|.+..|.+.|+|+.++|+.++++.|+|+|. |+.++|+|.++. ++|.|+ .+|.|++.
T Consensus 88 ~~v~I~V~DvNDn~P~F~~~~y~~~v~E~~~~gt~v~~v~A~D~D~~~~g~n~~i~Y~i~~~~-~~F~I~-~tG~i~~~~ 165 (203)
T 3ppe_A 88 SKFIIKVSDINDNAPIFVQKIFNGSVPEMSRLGTSVTKVTAEDADDPTVAGHATVTYQIIKGN-EYFTVD-DSGVIFTAR 165 (203)
T ss_dssp EEEEEEEECCCCCCCEESCSEEEEEEETTCCTTCEEEECCEECCSCTTSSSTTCEEEEEEEST-TTEEEC-TTSEEEESC
T ss_pred EEEEEEEcCCCCCCCCccCCccEEEEeccCCCCcEEEEEEEEcCCCcCCCCceEEEEEEeCCC-CcEEEe-CCeEEEECC
Confidence 3899999999999999999999999999999999999999999992 789999999765 589999 99999999
Q ss_pred ccCCccCCCEEEEEEEEEeC-CCCce
Q psy6837 90 DTLDREQKDKYRVQVRASDG-VQSAD 114 (122)
Q Consensus 90 ~~Ld~e~~~~~~l~v~a~D~-g~~~~ 114 (122)
++||||....|.|.|.|+|+ |.|++
T Consensus 166 ~~LD~E~~~~y~l~V~A~D~~G~p~~ 191 (203)
T 3ppe_A 166 ADLDRESQSAYEIIVKAKDALGLTGE 191 (203)
T ss_dssp SCCCTTTCSEEEEEEEEEETTCCCCS
T ss_pred cCCCcccCCEEEEEEEEEeCCCCCCC
Confidence 99999999999999999996 76644
No 6
>3qrb_A Cadherin-1; cell adhesion; HET: PGE; 1.80A {Mus musculus} PDB: 1ff5_A 3lng_A 2qvf_B 1edh_A 3lne_A 1q1p_A 3lni_A 3q2l_A* 3q2n_A* 3lnh_A 3lnf_A 2o72_A 1suh_A
Probab=99.96 E-value=1.1e-27 Score=165.30 Aligned_cols=99 Identities=30% Similarity=0.421 Sum_probs=90.7
Q ss_pred EEEEEEEecCCCCCcccCCceEEEEeCCCCCCcEEEEEEEECCCC-----CCcEEEEEEcCC-----CCcEEEECCccEE
Q psy6837 17 CVQLRILDRNDSPPSFADFHTEYTISEDVPVGTLVAKVKAIDPDL-----PGTIAYSLVAGD-----EGKFVLESSSGNL 86 (122)
Q Consensus 17 ~v~i~V~dvNdn~P~f~~~~~~~~v~E~~~~g~~v~~~~a~D~D~-----~~~i~y~l~~~~-----~~~f~i~~~~G~i 86 (122)
.+.|.|.|+|||+|.|.+..|.+.|+|+.++|+.++++.|+|+|. |+.++|+|.++. .++|.|++.+|.|
T Consensus 93 ~v~I~V~DvNDn~P~F~~~~y~~~v~En~~~gt~v~~v~A~D~D~~~~~~n~~i~Y~i~~~~~~~~~~~~F~Id~~tG~i 172 (213)
T 3qrb_A 93 EIVITVTDQNDNRPEFTQEVFEGSVAEGAVPGTSVMKVSATDADDDVNTYNAAIAYTIVSQDPELPHKNMFTVNRDTGVI 172 (213)
T ss_dssp EEEEEEECCSCCCCEESCSEEEEEEETTCCTTCEEEECCEECCSCTTTSSTTCCEEEEEEEESCCSCSCSEEECTTTCEE
T ss_pred EEEEEEEEccCCCCccCCCceEEEEECCCCCCcEEEEEEEEeCCCCCCCcCcEEEEEEccCCCCCCcCCeEEEECCCcEE
Confidence 899999999999999999999999999999999999999999996 478999998652 3689999999999
Q ss_pred EEc-ccCCccCCCEEEEEEEEEeCCCCcee
Q psy6837 87 KLK-DTLDREQKDKYRVQVRASDGVQSADV 115 (122)
Q Consensus 87 ~~~-~~Ld~e~~~~~~l~v~a~D~g~~~~~ 115 (122)
++. ++||||....|.|.|.|+|+|.|+++
T Consensus 173 ~~~~~~LD~E~~~~y~l~V~A~D~g~~~~s 202 (213)
T 3qrb_A 173 SVLTSGLDRESYPTYTLVVQAADLQGEGLS 202 (213)
T ss_dssp EECSSCCCTTTCCEEEEEEEEETGGGTSCE
T ss_pred EEccCCCCCccCceEEEEEEEEeCCCCCce
Confidence 997 79999999999999999997766554
No 7
>3k5r_A Cadherin 13; mouse, structural protein; 2.00A {Mus musculus} PDB: 3k5s_A
Probab=99.95 E-value=2.3e-27 Score=164.10 Aligned_cols=99 Identities=24% Similarity=0.382 Sum_probs=90.3
Q ss_pred EEEEEEEecCCCCCcccCCceEEEEeCCCCCCcEEEEEEEECCCC----CCcEEEEEEcCCC-----CcEEEECCccEEE
Q psy6837 17 CVQLRILDRNDSPPSFADFHTEYTISEDVPVGTLVAKVKAIDPDL----PGTIAYSLVAGDE-----GKFVLESSSGNLK 87 (122)
Q Consensus 17 ~v~i~V~dvNdn~P~f~~~~~~~~v~E~~~~g~~v~~~~a~D~D~----~~~i~y~l~~~~~-----~~f~i~~~~G~i~ 87 (122)
.+.|.|.|+|||+|.|.+..|.+.|+|++++|+.++++.|+|+|. |+.++|+|.++.. ++|.|++.+|.|+
T Consensus 93 ~v~I~V~DvNDn~P~F~~~~y~~~v~E~~~~gt~v~~v~A~D~D~~~g~n~~i~Y~i~~~~~~~~~~~~F~Id~~tG~i~ 172 (218)
T 3k5r_A 93 PLEVIVIDQNDNRPIFREGPYIGHVMEGSPTGTTVMRMTAFDADDPATDNALLRYNIRQQTPDKPSPNMFYIDPEKGDIV 172 (218)
T ss_dssp EEEEEEECTTCCCCCCCSCSEEEEEETTCCTTCEEEECCCSCSSSSCGGGGCEEEEEEEEESCCSCSCSEEECTTTCEEE
T ss_pred EEEEEEEeCCCCCCcccCCceEEEEECCCCCCCEEEEEEEEeCCCCCCCCcEEEEEEecCCCCCCcCCEEEEECCccEEE
Confidence 899999999999999999999999999999999999999999996 6889999987643 6799999999999
Q ss_pred Ec---ccCCccC--CCEEEEEEEEEeCC--CCcee
Q psy6837 88 LK---DTLDREQ--KDKYRVQVRASDGV--QSADV 115 (122)
Q Consensus 88 ~~---~~Ld~e~--~~~~~l~v~a~D~g--~~~~~ 115 (122)
+. ++||||. ...|.|.|.|+|+| .|+++
T Consensus 173 ~~~~~~~LD~E~~~~~~y~l~V~a~D~gg~~p~~s 207 (218)
T 3k5r_A 173 TVVSPALLDRETLENPKYELIIEAQDMAGLDVGLT 207 (218)
T ss_dssp ECSCGGGCCGGGCSCSEEEEEEEEEECSSTTTTCE
T ss_pred EeccCCCCCccccCCCeEEEEEEEEECCCCCCCee
Confidence 87 6999999 77999999999987 66544
No 8
>2qvi_A Cadherin-2; beta barrel, strand SWAP, domain SWAP, calcium, cell adhesion, cleavage on PAIR of basic residues, glycoprotein, membrane; 3.01A {Mus musculus} SCOP: b.1.6.1 b.1.6.1 PDB: 1ncj_A
Probab=99.95 E-value=1.7e-27 Score=164.60 Aligned_cols=96 Identities=26% Similarity=0.435 Sum_probs=89.4
Q ss_pred EEEEEEEecCCCCCcccCCceEEEEeCCCCCCcEEEEEEEECCCC----CCcEEEEEEcCC-----CCcEEEECCccEEE
Q psy6837 17 CVQLRILDRNDSPPSFADFHTEYTISEDVPVGTLVAKVKAIDPDL----PGTIAYSLVAGD-----EGKFVLESSSGNLK 87 (122)
Q Consensus 17 ~v~i~V~dvNdn~P~f~~~~~~~~v~E~~~~g~~v~~~~a~D~D~----~~~i~y~l~~~~-----~~~f~i~~~~G~i~ 87 (122)
.+.|.|.|+|||+|.|.+..|.+.|+|++++|+.++++.|+|+|. |+.++|+|.++. .+.|.|++.+|.|+
T Consensus 93 ~v~I~V~DvNDn~P~F~~~~y~~~v~En~~~gt~v~~v~A~D~D~~~g~n~~i~Y~i~~~~~~~~~~~~F~Id~~tG~i~ 172 (215)
T 2qvi_A 93 DIVINVIDMNDNRPEFLHQVWNGSVPEGSKPGTYVMTVTAIDADDPNALNGMLRYRILSQAPSTPSPNMFTINNETGDII 172 (215)
T ss_dssp EEEEEEECCCCCCCBCSSSEEEEEECSSCCTTCEEEECCCBCSSCTTSTTTCCCCEEEECSSCCSSTTCEEECTTTCEEE
T ss_pred EEEEEEeECCCCCCcccCceeEEEEeCCCCCCCEEEEEEEEeCCCCCCCCcEEEEEEecCCCCCCcCCeEEEcCCCcEEE
Confidence 899999999999999999999999999999999999999999995 688999999774 47899999999999
Q ss_pred Ec-ccCCccCCCEEEEEEEEEeCCCC
Q psy6837 88 LK-DTLDREQKDKYRVQVRASDGVQS 112 (122)
Q Consensus 88 ~~-~~Ld~e~~~~~~l~v~a~D~g~~ 112 (122)
+. ++||||....|.|.|.|+|+|.|
T Consensus 173 ~~~~~LD~E~~~~y~l~V~a~D~g~~ 198 (215)
T 2qvi_A 173 TVAAGLDREKVQQYTLIIQATDMEGN 198 (215)
T ss_dssp ECSCCCCTTTCSEEEEEEECCTTTTC
T ss_pred EecCCCCcccCCeEEEEEEEEECCCC
Confidence 95 79999999999999999997655
No 9
>2x2u_A Proto-oncogene tyrosine-protein kinase receptor RET; hirschsprung disease, extracellular domain, disease mutation, transferase, glycoprotein; HET: NAG SO4; 2.00A {Homo sapiens}
Probab=99.95 E-value=6.7e-28 Score=169.67 Aligned_cols=106 Identities=25% Similarity=0.311 Sum_probs=95.5
Q ss_pred EEEEEEEecCCCCCc----------ccCCceEEEEeCCCCCCcEEEEEEEECCCC--CCcEEEEEEcCCCCcEEEECCcc
Q psy6837 17 CVQLRILDRNDSPPS----------FADFHTEYTISEDVPVGTLVAKVKAIDPDL--PGTIAYSLVAGDEGKFVLESSSG 84 (122)
Q Consensus 17 ~v~i~V~dvNdn~P~----------f~~~~~~~~v~E~~~~g~~v~~~~a~D~D~--~~~i~y~l~~~~~~~f~i~~~~G 84 (122)
.+.|+|.|+|||+|. |.+..|.+.|+|+.++|+.++++.|+|+|. |+.++|+|.++..++|.|++.+|
T Consensus 114 ~v~I~V~DvNDn~P~~~~~~~~~~~F~~~~y~~~v~En~~~Gt~v~~v~A~D~D~g~n~~i~Y~i~~~~~~~F~Id~~tG 193 (246)
T 2x2u_A 114 CARVYFSFFNTSFPACSSLKPRELCFPETRPSFRIRENRPPGTFHQFRLLPVQFLCPQISVAYRLLEGEGLPFRSAPDSL 193 (246)
T ss_dssp EEEEEEEEESSCCCCGGGCCHHHHHSCSSCCCEEEEBTSCCCEEEECSCHHHHHHCTTSCEEEEEESCTTSSEECCTTCC
T ss_pred EEEEEEEECCCCCCccccccccccccCCCcEEEEEECCCCCCcEEEEEEEEcCCCCCCcEEEEEEccCCCCCEEEECCcC
Confidence 899999999999999 999999999999999999999999999998 89999999987778999999999
Q ss_pred EEEEcccCCccCCCEEEEEEEEEe-CCCCcee-----EEEEEcC
Q psy6837 85 NLKLKDTLDREQKDKYRVQVRASD-GVQSADV-----VLTILNC 122 (122)
Q Consensus 85 ~i~~~~~Ld~e~~~~~~l~v~a~D-~g~~~~~-----~v~I~d~ 122 (122)
.|++.++||||....|.|.|.|+| .|.|+++ +|+|.|+
T Consensus 194 ~i~~~~~LDrE~~~~y~l~V~A~d~dg~p~~ss~~~v~I~V~Dv 237 (246)
T 2x2u_A 194 EVSTRWALDREQREKYELVAVCTVHAGAREEVVMVPFPVTVYDE 237 (246)
T ss_dssp EEEESSCBCTTTCSEEEEEEEEEEC---CCEEEEEEEEEEEECS
T ss_pred EEEeCCccCccccceEEEEEEEEecCCCCcceEEEEEEEEEEEe
Confidence 999999999999999999999987 4446554 5666664
No 10
>3lnd_A CDH6 protein, cadherin 6; cell adhesion, cell membrane, membrane, transmembr; 2.82A {Mus musculus}
Probab=99.95 E-value=1.8e-27 Score=163.49 Aligned_cols=95 Identities=33% Similarity=0.474 Sum_probs=87.1
Q ss_pred EEEEEEEecCCCCCcccCCceEEEEeCCCCCCcEEEEEEEECCCC-----CCcEEEEEEcCCCCcEEEECCccEEEEc-c
Q psy6837 17 CVQLRILDRNDSPPSFADFHTEYTISEDVPVGTLVAKVKAIDPDL-----PGTIAYSLVAGDEGKFVLESSSGNLKLK-D 90 (122)
Q Consensus 17 ~v~i~V~dvNdn~P~f~~~~~~~~v~E~~~~g~~v~~~~a~D~D~-----~~~i~y~l~~~~~~~f~i~~~~G~i~~~-~ 90 (122)
.+.|.|.|+|||+|.|.+..|.+.|+|+.++|+.++++.|+|+|. |+.++|+|.++. ++|.|++.+|.|++. +
T Consensus 91 ~v~I~V~DvNDn~P~F~~~~y~~~v~E~~~~gt~v~~v~A~D~D~~~~g~n~~i~Y~i~~~~-~~F~Id~~tG~i~~~~~ 169 (207)
T 3lnd_A 91 EFIIKIHDINDNEPIFTKDVYTATVPEMADVGTFVVQVTATDADDPTYGNSAKVVYSILQGQ-PYFSVESETGIIKTALL 169 (207)
T ss_dssp CCEEEEECCSCCCCEESCSEEEEEEESSCCTTCEEEECCEECSSCTTSSSTTCCEEEEEESG-GGEEECTTTCEEEECCS
T ss_pred EEEEEECccCCCCCccCCCceEEEEeCCCCCCCEEEEEEEEeCCCCCCCCCcEEEEEEcCCC-CCEEEcCCCcEEEECcc
Confidence 799999999999999999999999999999999999999999994 678999999764 589999999999999 9
Q ss_pred cCCccCCCEEEEEEEEEeCCCC
Q psy6837 91 TLDREQKDKYRVQVRASDGVQS 112 (122)
Q Consensus 91 ~Ld~e~~~~~~l~v~a~D~g~~ 112 (122)
+||||....|.|.|.|+|+|.|
T Consensus 170 ~lD~E~~~~y~l~V~A~D~g~~ 191 (207)
T 3lnd_A 170 NMDRENREQYQVVIQAKDMGGQ 191 (207)
T ss_dssp SCCC--CCEEEEEEEEESGGGC
T ss_pred cCCcccCCEEEEEEEEEECCCC
Confidence 9999999999999999997754
No 11
>4apx_B Protocadherin-15, otocadherin; cell adhesion, hearing, deafness, CDH23, PCDH15; HET: MES; 1.65A {Mus musculus} PDB: 4aq8_C 4aqa_B* 4aqe_B* 4axw_B*
Probab=99.94 E-value=5.6e-26 Score=159.56 Aligned_cols=97 Identities=33% Similarity=0.457 Sum_probs=89.1
Q ss_pred EEEEEEEecCCCCCcccCCceEEEEeCCCCCCcEEEE-----EEEECCCC--CCcEEEEEEcCCC-----CcEEEEC-Cc
Q psy6837 17 CVQLRILDRNDSPPSFADFHTEYTISEDVPVGTLVAK-----VKAIDPDL--PGTIAYSLVAGDE-----GKFVLES-SS 83 (122)
Q Consensus 17 ~v~i~V~dvNdn~P~f~~~~~~~~v~E~~~~g~~v~~-----~~a~D~D~--~~~i~y~l~~~~~-----~~f~i~~-~~ 83 (122)
.|.|.|.|+|||+|.|.+..|.+.|+|++++|+.|.+ +.|+|+|. |+.++|+|..+.. +.|.|++ .+
T Consensus 112 ~V~I~V~DvNDn~P~F~~~~y~~~v~En~~~Gt~v~~~~~~~v~A~D~D~g~N~~v~Ysi~~~~~~~~~~~~F~Id~~~t 191 (242)
T 4apx_B 112 EVRIVVRDRNDNSPTFKHESYYATVNELTPVGTTIFTGFSGDNGATDIDDGPNGQIEYVIQYNPEDPTSNDTFEIPLMLT 191 (242)
T ss_dssp EEEEEEECCCCCCCEESSSCEEEEEETTCCTTCEEECTTTTTTSEECCSSGGGGCEEEEEECCTTSTTHHHHEECSSTTT
T ss_pred EEEEEEEeCCCCCCcccceeeeeEeeeccCCCCEEEEeeecccccccCCCCcCCceEEEEecCCCCcccccceEEcCCCc
Confidence 7999999999999999999999999999999999976 78999998 8899999997743 4699985 59
Q ss_pred cEEEEcccCCccCCCEEEEEEEEEeCCCCc
Q psy6837 84 GNLKLKDTLDREQKDKYRVQVRASDGVQSA 113 (122)
Q Consensus 84 G~i~~~~~Ld~e~~~~~~l~v~a~D~g~~~ 113 (122)
|.|++.++||||....|.|.|.|+|+|.|+
T Consensus 192 G~i~~~~~LD~E~~~~y~l~V~A~D~G~~~ 221 (242)
T 4apx_B 192 GNVVLRKRLNYEDKTRYYVIIQANDRAQNL 221 (242)
T ss_dssp CCEEECSCCCTTTCCEEEEEEEEEECCSSG
T ss_pred eEEEECCcCChhhCCEEEEEEEEEECCcCc
Confidence 999999999999999999999999988774
No 12
>2a62_A Cadherin-8; extracellular domain, homodimer, calcium binding, adhesion; 4.50A {Mus musculus}
Probab=99.93 E-value=2.3e-25 Score=162.08 Aligned_cols=98 Identities=31% Similarity=0.558 Sum_probs=89.2
Q ss_pred eEEEEEEEecCCCCCcccCCceEEEEeCCCCCCcEEEEEEEECCCC--CCcEEEEEEcCC-CCcEEEE----CCccEEEE
Q psy6837 16 GCVQLRILDRNDSPPSFADFHTEYTISEDVPVGTLVAKVKAIDPDL--PGTIAYSLVAGD-EGKFVLE----SSSGNLKL 88 (122)
Q Consensus 16 ~~v~i~V~dvNdn~P~f~~~~~~~~v~E~~~~g~~v~~~~a~D~D~--~~~i~y~l~~~~-~~~f~i~----~~~G~i~~ 88 (122)
+.+.|.|.|+|||+|.|.+..|.+.|+|+.++|+.++++.|+|+|. |+.++|+|..+. .++|.|+ +.+|.|++
T Consensus 199 ~~v~I~V~DvNDn~P~F~~~~y~~~v~En~~~gt~v~~v~A~D~D~g~n~~i~Y~i~~g~~~~~F~I~~d~~~~tG~i~~ 278 (322)
T 2a62_A 199 TTLTVTLTDVNDNPPKFAQSLYHFSVPEDVVLGTAIGRVKANDQDIGENAQSSYDIIDGDGTALFEITSDAQAQDGVIRL 278 (322)
T ss_dssp EEEEEEECCCCCCCCCCSCSEEEEEECSCCSSCCEEEEEECCCSSCGGGTCCEEEEC---CCSSBCCBCCTTTSEEEEEB
T ss_pred EEEEEEEEecCCCCCeecCCCceeEeECCCCCCcEEEEEEEEeCCCCCCceEEEEEECCCCCCcEEEeccCCCceEEEEE
Confidence 3999999999999999999999999999999999999999999998 789999998764 5799998 46899999
Q ss_pred cccCCccCCCEEEEEEEEEeCCCCc
Q psy6837 89 KDTLDREQKDKYRVQVRASDGVQSA 113 (122)
Q Consensus 89 ~~~Ld~e~~~~~~l~v~a~D~g~~~ 113 (122)
.++||||....|.|.|.|+|+|.|+
T Consensus 279 ~~~LD~E~~~~y~l~V~A~D~g~pp 303 (322)
T 2a62_A 279 RKPLDFETKKSYTLKVEAANIHIDP 303 (322)
T ss_dssp CSCCCCSSCCEEEEEEEEECCCSSC
T ss_pred CCcCCcccCCeEEEEEEEEECCCCC
Confidence 9999999999999999999987653
No 13
>2a62_A Cadherin-8; extracellular domain, homodimer, calcium binding, adhesion; 4.50A {Mus musculus}
Probab=99.93 E-value=9.8e-26 Score=163.99 Aligned_cols=119 Identities=26% Similarity=0.332 Sum_probs=100.3
Q ss_pred eEEEEEEcCCCc-----eeEEEEEEEecCCCCCcccCCceEEEEeCCCCCCcEEEEEEEECCCC-----CCcEEEEEEcC
Q psy6837 3 DLTLNLAHKFGV-----IGCVQLRILDRNDSPPSFADFHTEYTISEDVPVGTLVAKVKAIDPDL-----PGTIAYSLVAG 72 (122)
Q Consensus 3 ~l~~~~~~~~g~-----~~~v~i~V~dvNdn~P~f~~~~~~~~v~E~~~~g~~v~~~~a~D~D~-----~~~i~y~l~~~ 72 (122)
.|++.+.+..+. ...+.|.|.|+|||+|.|.+..|.+.|+|++++|+.++++.|+|+|. |+.++|+|.++
T Consensus 72 ~l~v~a~D~~~~~~~~~~~~v~I~V~DvNDn~P~F~~~~y~~~v~E~~~~gt~v~~v~A~D~D~~~~G~n~~i~Y~i~~~ 151 (322)
T 2a62_A 72 TLTAQAVDFETNKPLEPPSEFIIKVQDINDNAPEFLNGPYHATVPEMSILGTSVTNVTATDADDPVYGNSAKLVYSILEG 151 (322)
T ss_dssp CEEEEEECTTTCSEEEEEEEECEECCCCSCSCBCCSSSEEEEEECSSCCTTCBCCCCCCCBCSCSSSTTSSCEEEEEEEC
T ss_pred EEEEEEEECCCCCcccceEEEEEEEEecCCCCCccCCCceEEEEeCCCCCCCEEEEEEEEeCCCCCCCccEEEEEEEccC
Confidence 455555554331 23899999999999999999999999999999999999999999993 67899999976
Q ss_pred CCCcEEEECCccEEEEc-ccCCccCCCEEEEEEEEEeCCCCc--e---e--EEEEEcC
Q psy6837 73 DEGKFVLESSSGNLKLK-DTLDREQKDKYRVQVRASDGVQSA--D---V--VLTILNC 122 (122)
Q Consensus 73 ~~~~f~i~~~~G~i~~~-~~Ld~e~~~~~~l~v~a~D~g~~~--~---~--~v~I~d~ 122 (122)
. ++|.|++.+|.|++. +.||||....|.|.|.|+|+|.|+ + + +|+|.|+
T Consensus 152 ~-~~F~Id~~tG~i~~~~~~LD~E~~~~y~l~V~a~D~g~p~~~~s~~~~v~I~V~Dv 208 (322)
T 2a62_A 152 Q-PYFSIEPETAIIKTALPNMDREAKEEYLVVIQAKDMGGHSGGLSGTTTLTVTLTDV 208 (322)
T ss_dssp T-TTEEECTTTCCEEECSSCCCGGGCSEEEEEEEEEESCSSSSCCBCCEEEEEEECCC
T ss_pred C-CCEEEecCCCEEEecccCCCcccCCeEEEEEEEEECCCCCCCceeEEEEEEEEEec
Confidence 4 689999999999998 899999999999999999987653 2 2 5666654
No 14
>3ubf_A Neural-cadherin; cell adhesion; 2.50A {Drosophila melanogaster} PDB: 3ubg_A
Probab=99.93 E-value=1.7e-24 Score=156.90 Aligned_cols=96 Identities=27% Similarity=0.367 Sum_probs=89.0
Q ss_pred eEEEEEEEecCCCCCcccCCc--eEEEEeCCCCCCcEEEEEEEECCCCCCcEEEEEEcC-CCCcEEEECCccEEEEcccC
Q psy6837 16 GCVQLRILDRNDSPPSFADFH--TEYTISEDVPVGTLVAKVKAIDPDLPGTIAYSLVAG-DEGKFVLESSSGNLKLKDTL 92 (122)
Q Consensus 16 ~~v~i~V~dvNdn~P~f~~~~--~~~~v~E~~~~g~~v~~~~a~D~D~~~~i~y~l~~~-~~~~f~i~~~~G~i~~~~~L 92 (122)
..+.|.|.|+|||+|.|.+.. |.+.|+|++++|+.++++.|+|+|.+..++|+|..+ ..++|.|++.+|.|++.++|
T Consensus 90 ~~v~I~V~DvNDn~P~F~~~~~~y~~~v~En~~~gt~v~~v~A~D~D~g~ni~Y~i~~~~~~~~F~Id~~tG~i~~~~~l 169 (316)
T 3ubf_A 90 QRVIILVKDVNDEPPYFINRPLPMQAVVQLNAPPNTPVFTLQARDPDTDHNIHYFIVRDRTGGRFEVDERSGVVRTRGTD 169 (316)
T ss_dssp EEEEEEEECTTCCCCEECCSSSSEEEEECTTCCTTCEEEECCEECSSTTCCEEEEEEEEESSSCEEECTTTCEEEECSSC
T ss_pred EEEEEEEEECCCCCCccCCCCCCEEEEEeCCCCCCCEEEEEEEECCCCCCceEEEEEeCCCCCEEEEECCccEEEECCcC
Confidence 489999999999999999887 899999999999999999999999855599999865 46899999999999999999
Q ss_pred CccCCCEEEEEEEEEeCCC
Q psy6837 93 DREQKDKYRVQVRASDGVQ 111 (122)
Q Consensus 93 d~e~~~~~~l~v~a~D~g~ 111 (122)
|||....|.|.|.|+|+|.
T Consensus 170 D~e~~~~y~l~V~A~D~g~ 188 (316)
T 3ubf_A 170 LFQLDMEYVLYVKAEDQNG 188 (316)
T ss_dssp CCCTTCEEEEEEEEEESCC
T ss_pred CcccCcEEEEEEEEEeCCC
Confidence 9999999999999999763
No 15
>3ubf_A Neural-cadherin; cell adhesion; 2.50A {Drosophila melanogaster} PDB: 3ubg_A
Probab=99.93 E-value=3.2e-24 Score=155.43 Aligned_cols=104 Identities=25% Similarity=0.324 Sum_probs=91.5
Q ss_pred EEEEEEEecCCCCCcccCCceEEEEeCCCCCCcEEEEEEEECCCCCCcEEEEEE-cC-CCCcEEEECCccEEEEcccCCc
Q psy6837 17 CVQLRILDRNDSPPSFADFHTEYTISEDVPVGTLVAKVKAIDPDLPGTIAYSLV-AG-DEGKFVLESSSGNLKLKDTLDR 94 (122)
Q Consensus 17 ~v~i~V~dvNdn~P~f~~~~~~~~v~E~~~~g~~v~~~~a~D~D~~~~i~y~l~-~~-~~~~f~i~~~~G~i~~~~~Ld~ 94 (122)
.+.|.|.| |||+|.|.+..|.+.|+|+.++|+.++++.|.|+| ++.++|+|. .+ ..++|.|++.+|.|++.++|||
T Consensus 200 ~v~I~V~d-nDn~P~F~~~~y~~~v~En~~~gt~v~~v~A~D~D-n~~i~Y~i~~~~~~~~~F~Id~~tG~i~~~~~LD~ 277 (316)
T 3ubf_A 200 EERLSIVG-GKRAPQFYMPSYEAEIPENQKKDSDIISIKAKSFA-DREIRYTLKAQGQGAGTFNIGPTSGIVKLAKELDF 277 (316)
T ss_dssp CEEEEEEE-SCCCCEESSSSEEEEEETTCCTTCEEEECCEECTT-CCCEEEEEEEESSCTTTEEECTTTCEEEECSCCCS
T ss_pred EEEEEEEc-CCCCCEEcCCCceEEEeCCCCCCCEEEEEEEEeCC-CCEEEEEEEcCCCCCCeEEEECCeEEEEECCcCCc
Confidence 78999999 99999999999999999999999999999999999 999999997 34 4689999999999999999999
Q ss_pred cCC---CEEEEEEEEEe-CCCCc-ee--EEEEEcC
Q psy6837 95 EQK---DKYRVQVRASD-GVQSA-DV--VLTILNC 122 (122)
Q Consensus 95 e~~---~~~~l~v~a~D-~g~~~-~~--~v~I~d~ 122 (122)
|.. ..|.|.|.|+| +|... .+ +|+|.|+
T Consensus 278 E~~~~~~~y~l~V~A~dd~g~~~~~~~v~I~V~Dv 312 (316)
T 3ubf_A 278 EDLRQPHVYSLIVTATEDSGGFSTSVDLTIRVTDV 312 (316)
T ss_dssp SCTTSCSEEEEEEEEEESSSSCEEEEEEEEEEECC
T ss_pred cccCCCceEEEEEEEEECCCCCEEEEEEEEEEEec
Confidence 997 79999999994 44322 22 6667664
No 16
>3ubh_A Neural-cadherin; cell adhesion; 2.70A {Drosophila melanogaster}
Probab=99.92 E-value=3e-24 Score=160.78 Aligned_cols=109 Identities=27% Similarity=0.435 Sum_probs=94.8
Q ss_pred eEEEEEEcCCCcee---EEEEEEEecCCCCCcccCCceEE-EEeCCCCCCcEEEEEEEECCCC--CCcEEEEEEcCCCCc
Q psy6837 3 DLTLNLAHKFGVIG---CVQLRILDRNDSPPSFADFHTEY-TISEDVPVGTLVAKVKAIDPDL--PGTIAYSLVAGDEGK 76 (122)
Q Consensus 3 ~l~~~~~~~~g~~~---~v~i~V~dvNdn~P~f~~~~~~~-~v~E~~~~g~~v~~~~a~D~D~--~~~i~y~l~~~~~~~ 76 (122)
.|++.+.++.|... .+.|.|.|+|||+|.|....|.. .|+|+.++|+.|+++.|+|+|. |+.++|+|.+ ++
T Consensus 292 ~l~V~a~dd~~~~s~~~~v~I~V~DvNDn~P~f~~~~~~~~~v~E~~~~gt~v~~v~A~D~D~g~n~~v~Y~i~~---~~ 368 (419)
T 3ubh_A 292 SLIVTATEDSGGFSTSVDLTIRVTDVNDNAPKFELPDYQAHNVDEDIPLGTSILRVKAMDSDSGSNAEIEYLVSD---DH 368 (419)
T ss_dssp EEEEEEECTTTSCEEEEEEEEEEECCCCCCCEESSSEEEEEEEETTCCTTCEEEECCEECSSCGGGGCEEEEESC---TT
T ss_pred EEEEEEEeCCCCcEEEEEEEEEEEccCCCCCcccCCcceeEEecCCCCCCCEEEEEEEEeCCCCCCCEEEEEEcC---Cc
Confidence 34555554443322 89999999999999999999987 7999999999999999999999 8899999973 48
Q ss_pred EEEECCccEEEEcccCCccC-CCEEEEEEEEEeCCCCcee
Q psy6837 77 FVLESSSGNLKLKDTLDREQ-KDKYRVQVRASDGVQSADV 115 (122)
Q Consensus 77 f~i~~~~G~i~~~~~Ld~e~-~~~~~l~v~a~D~g~~~~~ 115 (122)
|.|++ +|.|++.++||||. ...|.|.|.|+|+|.|+++
T Consensus 369 F~Id~-~G~i~~~~~ld~E~~~~~y~l~V~a~D~G~p~~s 407 (419)
T 3ubh_A 369 FAVDS-NGIIVNNKQLDADNNNAYYEFIVTAKDKGEPPKS 407 (419)
T ss_dssp EEECT-TCEEEECSCSSSSCTTCEEEEEEEEEECCSSCCE
T ss_pred EEECC-CeEEEECcccCcccCCceEEEEEEEEECCcCCce
Confidence 99997 89999999999998 6789999999999988765
No 17
>1l3w_A EP-cadherin, C-cadherin; cell adhesion, calcium binding, extracellular, ECT metal binding protein; HET: NAG NDG; 3.08A {Xenopus laevis} SCOP: b.1.6.1 b.1.6.1 b.1.6.1 b.1.6.1 b.1.6.1
Probab=99.92 E-value=1.8e-24 Score=166.57 Aligned_cols=107 Identities=28% Similarity=0.433 Sum_probs=95.2
Q ss_pred eEEEEEEEecCCCCCcccCCceEEEEeCCCCCCcEEEEEEEECCCC-----CCcEEEEEEcCC-----CCcEEEECCccE
Q psy6837 16 GCVQLRILDRNDSPPSFADFHTEYTISEDVPVGTLVAKVKAIDPDL-----PGTIAYSLVAGD-----EGKFVLESSSGN 85 (122)
Q Consensus 16 ~~v~i~V~dvNdn~P~f~~~~~~~~v~E~~~~g~~v~~~~a~D~D~-----~~~i~y~l~~~~-----~~~f~i~~~~G~ 85 (122)
..+.|.|.|+|||+|.|.+..|.+.|+|++++|+.++++.|+|+|. |+.++|+|.++. .++|.|++.+|.
T Consensus 98 ~~v~I~V~DvNDn~P~F~~~~y~~~V~En~~~gt~v~~v~A~D~D~g~~~~n~~v~Ysi~~~~~~~~~~~~F~Id~~tG~ 177 (546)
T 1l3w_A 98 MEITINVIDQNDNRPKFTQDVFRGSVREGVQPGTQVMAVSATDEDDNIDSLNGVLSYSILKQDPEEPIPNLFTINRETGV 177 (546)
T ss_dssp EEEEEEEECCSCCCCEESSSCEEEEEETTCCSSEEEEECCEECCSCCSSSSTTCCEEEEEEESSCCSCSCSEEECTTTCE
T ss_pred EEEEEEEEecccCcCEecCceeEEEEECCCCCCCEEEEEEEEcCCCCCCCCCCEEEEEEeCCCCCcccCCcEEEeCCCce
Confidence 4899999999999999999999999999999999999999999996 378999998764 378999999999
Q ss_pred EEEc-ccCCccCCCEEEEEEEEEeCCCCcee-----EEEEEcC
Q psy6837 86 LKLK-DTLDREQKDKYRVQVRASDGVQSADV-----VLTILNC 122 (122)
Q Consensus 86 i~~~-~~Ld~e~~~~~~l~v~a~D~g~~~~~-----~v~I~d~ 122 (122)
|++. ++||||....|.|.|+|+|+|.|+++ +|+|.|+
T Consensus 178 i~~~~~~LD~E~~~~y~l~V~A~D~g~~~~s~~~~v~I~V~Dv 220 (546)
T 1l3w_A 178 ISLIGTGLDREKFPEYTLTVQATDLEGAGLSVEGKAIIQITDA 220 (546)
T ss_dssp EEECSCCCCTTTCCEEEEEEEEEHHHHTSCEEECCEEEEEECC
T ss_pred EEEeccCCCcccCceEEEEEEEEECCCCCcceEEEEEEEEeec
Confidence 9985 78999999999999999997655432 6777764
No 18
>3q2v_A Cadherin-1; cell adhesion, calcium binding; HET: MAN; 3.40A {Mus musculus}
Probab=99.92 E-value=6.4e-24 Score=163.60 Aligned_cols=107 Identities=21% Similarity=0.384 Sum_probs=98.4
Q ss_pred eeEEEEEEEecCCCCCcccCCceEEEEeCCCCCCcEEEEEEEECCCC--CCcEEEEEEcCCCCcEEEECCccEEEEcccC
Q psy6837 15 IGCVQLRILDRNDSPPSFADFHTEYTISEDVPVGTLVAKVKAIDPDL--PGTIAYSLVAGDEGKFVLESSSGNLKLKDTL 92 (122)
Q Consensus 15 ~~~v~i~V~dvNdn~P~f~~~~~~~~v~E~~~~g~~v~~~~a~D~D~--~~~i~y~l~~~~~~~f~i~~~~G~i~~~~~L 92 (122)
.+.|.|.|.|+|| +|.|....|.+.|+|+.++|+.++++.|+|+|. ++.++|+|.++..++|.|++.+|.|++.+.|
T Consensus 316 ~~~v~I~V~DvND-~P~f~~~~~~~~v~E~~~~gt~v~~v~A~D~D~g~n~~i~y~i~~~~~~~f~id~~tG~i~~~~~l 394 (550)
T 3q2v_A 316 TATVTVDVVDVNE-APIFMPAERRVEVPEDFGVGQEITSYTAREPDTFMDQKITYRIWRDTANWLEINPETGAIFTRAEM 394 (550)
T ss_dssp EEEEEEEEECCCC-CCEESSSSCEEEEETTCCSSCEEEECCEECCCCSTTCCCEEEEEECTTCCEEECTTTCEEEECSCC
T ss_pred EEEEEEEEEecCC-CCeEcCcceEEEEecCCCCCCEEEEEeCCCCCCCCCCCEEEEEecCCCCcEEEeCCCcEEEECCcc
Confidence 3489999999999 999999999999999999999999999999998 8999999987777899999999999999999
Q ss_pred CccCC-----CEEEEEEEEEeCCCCcee-----EEEEEcC
Q psy6837 93 DREQK-----DKYRVQVRASDGVQSADV-----VLTILNC 122 (122)
Q Consensus 93 d~e~~-----~~~~l~v~a~D~g~~~~~-----~v~I~d~ 122 (122)
|||.. ..|.|.|.|+|+|.|+++ +|+|+||
T Consensus 395 DrE~~~~~~~~~y~l~V~A~D~g~p~~s~~~~v~I~V~Dv 434 (550)
T 3q2v_A 395 DREDAEHVKNSTYVALIIATDDGSPIATGTGTLLLVLLDV 434 (550)
T ss_dssp CTTCTTTCCSSEEEEEEEEECCSSSCCCEEEEEEEEEECC
T ss_pred CcccccccCCCEEEEEEEEEeCCCCcceeEEEEEEEEEeC
Confidence 99998 999999999998887654 6667665
No 19
>3q2v_A Cadherin-1; cell adhesion, calcium binding; HET: MAN; 3.40A {Mus musculus}
Probab=99.92 E-value=3e-24 Score=165.45 Aligned_cols=120 Identities=28% Similarity=0.361 Sum_probs=100.0
Q ss_pred eEEEEEEcCCCc----eeEEEEEEEecCCCCCcccCCceEEEEeCCCCCCcEEEEEEEECCCC-----CCcEEEEEEcCC
Q psy6837 3 DLTLNLAHKFGV----IGCVQLRILDRNDSPPSFADFHTEYTISEDVPVGTLVAKVKAIDPDL-----PGTIAYSLVAGD 73 (122)
Q Consensus 3 ~l~~~~~~~~g~----~~~v~i~V~dvNdn~P~f~~~~~~~~v~E~~~~g~~v~~~~a~D~D~-----~~~i~y~l~~~~ 73 (122)
.|++.+.+..|. +..+.|.|.|+|||+|.|.+..|.+.|+|++++|+.++++.|+|+|. |+.++|+|.++.
T Consensus 75 ~l~v~a~d~~~~~~~~~~~v~I~V~DvNDn~P~F~~~~y~~~V~E~~~~Gt~v~~v~A~D~D~g~~~~N~~i~Ysi~~~~ 154 (550)
T 3q2v_A 75 ILYSHAVSSNGEAVEDPMEIVITVTDQNDNRPEFTQEVFEGSVAEGAVPGTSVMKVSATDADDDVNTYNAAIAYTIVSQD 154 (550)
T ss_dssp EEEEEEEETTSCBCSCCEEEEEEEECCSCCCCCBSCSEEEEEEETTCCTTCEEEECCBCCCSCTTTCGGGCCEEEEEEEE
T ss_pred EEEEEEEeCCCCcccceEEEEEEEEecCCCCCccCCCceEEEEeCCCCCCCEEEEEEEEeCCCCCCCcceEEEEEEecCC
Confidence 345555554442 23899999999999999999999999999999999999999999996 478999998652
Q ss_pred -----CCcEEEECCccEEEE-cccCCccCCCEEEEEEEEEeCCCCcee-----EEEEEcC
Q psy6837 74 -----EGKFVLESSSGNLKL-KDTLDREQKDKYRVQVRASDGVQSADV-----VLTILNC 122 (122)
Q Consensus 74 -----~~~f~i~~~~G~i~~-~~~Ld~e~~~~~~l~v~a~D~g~~~~~-----~v~I~d~ 122 (122)
.++|.|++.+|.|++ .++||||....|.|.|+|+|+|.|.++ +|+|.|+
T Consensus 155 ~~~~~~~~F~id~~tG~i~~~~~~LDrE~~~~y~l~V~A~D~g~~~~s~t~~v~I~V~Dv 214 (550)
T 3q2v_A 155 PELPHKNMFTVNRDTGVISVLTSGLDRESYPTYTLVVQAADLQGEGLSTTAKAVITVKDI 214 (550)
T ss_dssp SCCSSSCSEEECTTTCEEEECSSCCCTTTCSEEEEEEEEESGGGTSCCCEEEEEEEEECC
T ss_pred CCCCcCCceEEcCCCeEEEEccCCCCcccCcEEEEEEEEEcCCCCCeeEEEEEEEEeccc
Confidence 468999999999987 579999999999999999996555433 6666664
No 20
>3q2w_A Cadherin-2; cell adhesion, calcium binding; HET: MAN NAG; 3.20A {Mus musculus}
Probab=99.92 E-value=2.1e-24 Score=166.53 Aligned_cols=108 Identities=25% Similarity=0.376 Sum_probs=93.2
Q ss_pred eEEEEEEcCCCce----eEEEEEEEecCCCCCcccCCceEEEEeCCCCCCcEEEEEEEECCCC----CCcEEEEEEcCCC
Q psy6837 3 DLTLNLAHKFGVI----GCVQLRILDRNDSPPSFADFHTEYTISEDVPVGTLVAKVKAIDPDL----PGTIAYSLVAGDE 74 (122)
Q Consensus 3 ~l~~~~~~~~g~~----~~v~i~V~dvNdn~P~f~~~~~~~~v~E~~~~g~~v~~~~a~D~D~----~~~i~y~l~~~~~ 74 (122)
.|++.+.+..|.+ ..+.|+|.|+|||+|.|.+..|.+.|+|++++|+.++++.|+|+|. |+.++|+|.++..
T Consensus 75 ~l~v~a~D~g~~~~~~~~~v~I~V~DvNDn~P~F~~~~y~~~V~En~~~Gt~v~~v~A~D~D~g~~~n~~v~Ysi~~~~~ 154 (559)
T 3q2w_A 75 HLRAHAVDINGNQVENPIDIVINVIDMNDNRPEFLHQVWNGSVPEGSKPGTYVMTVTAIDADDPNALNGMLRYRILSQAP 154 (559)
T ss_dssp EEEEEEEETTSCEEEEEEEEEEEEECCCCCCCEESCSEEEEEEETTCCTTCEEEECCEECSSCTTSGGGCCEEEEEEEES
T ss_pred EEEEEEEECCCCccceeEEEEEEEEeCCCCCCccCCCeeEEEEeCCCCCCcEEEEEEEEcCCCCCCCceEEEEEEecCCC
Confidence 3455555443322 2799999999999999999999999999999999999999999996 6789999986532
Q ss_pred -----CcEEEECCccEEEEcc-cCCccCCCEEEEEEEEEeCC
Q psy6837 75 -----GKFVLESSSGNLKLKD-TLDREQKDKYRVQVRASDGV 110 (122)
Q Consensus 75 -----~~f~i~~~~G~i~~~~-~Ld~e~~~~~~l~v~a~D~g 110 (122)
+.|.|++.+|.|++.+ .||||....|.|.|+|+|+|
T Consensus 155 ~~~~~~~F~Id~~tG~i~~~~~~LD~E~~~~y~l~V~A~D~~ 196 (559)
T 3q2w_A 155 STPSPNMFTINNETGDIITVAAGLDREKVQQYTLIIQATDME 196 (559)
T ss_dssp CCSCTTCEEECTTTCEEEECCSCCCTTTCCEEEEEEEEEHHH
T ss_pred CCCCcceEEEeCCceEEEEEeccCCcccCCEEEEEEEEEECC
Confidence 6899999999999987 99999999999999999953
No 21
>3q2w_A Cadherin-2; cell adhesion, calcium binding; HET: MAN NAG; 3.20A {Mus musculus}
Probab=99.92 E-value=2.1e-23 Score=160.95 Aligned_cols=106 Identities=24% Similarity=0.358 Sum_probs=97.4
Q ss_pred eEEEEEEEecCCCCCcccCCceEEEEeCCCCCCcEEEEEEEECCCC--CCcEEEEEEcCCCCcEEEECCccEEEEcccCC
Q psy6837 16 GCVQLRILDRNDSPPSFADFHTEYTISEDVPVGTLVAKVKAIDPDL--PGTIAYSLVAGDEGKFVLESSSGNLKLKDTLD 93 (122)
Q Consensus 16 ~~v~i~V~dvNdn~P~f~~~~~~~~v~E~~~~g~~v~~~~a~D~D~--~~~i~y~l~~~~~~~f~i~~~~G~i~~~~~Ld 93 (122)
+.|.|.|.|+|| +|.|.+..|.+.|+|+.++|+.++++.|+|+|. |+.++|+|.++..++|.|++.+|.|++.+.||
T Consensus 323 ~~v~I~V~DvND-~P~f~~~~~~~~v~En~~~g~~v~~v~A~D~D~g~n~~i~Ysi~~~~~~~f~Id~~tG~i~~~~~lD 401 (559)
T 3q2w_A 323 ATVSVTVIDVNE-NPYFAPNPKIIRQEEGLHAGTMLTTLTAQDPDRYMQQNIRYTKLSDPANWLKIDPVNGQITTIAVLD 401 (559)
T ss_dssp EEEEEEEECCCC-CCEESSSEEEEEEESCCCTTCEEEECCEECSCSSSCCCEEEEEEECTTCCEEECTTTCEEEESSCCC
T ss_pred EEEEEEEEeCCC-CCcccccceEEEEeCCCCCCCEEEEEEEECCCCCCCCceEEEEccCCccceEecCCceEEEEccccC
Confidence 499999999999 699999999999999999999999999999998 88999999987778999999999999999999
Q ss_pred ccCC----CEEEEEEEEEeCCCCcee-----EEEEEcC
Q psy6837 94 REQK----DKYRVQVRASDGVQSADV-----VLTILNC 122 (122)
Q Consensus 94 ~e~~----~~~~l~v~a~D~g~~~~~-----~v~I~d~ 122 (122)
||.. ..|.|.|.|+|+|.|+++ +|+|+||
T Consensus 402 rE~~~~~~~~y~l~V~A~D~g~p~~ss~~~v~I~V~Dv 439 (559)
T 3q2w_A 402 RESPNVKNNIYNATFLASDNGIPPMSGTGTLQIYLLDI 439 (559)
T ss_dssp SSSTTSCSSEEEEEEEEEECSSSCCEEEEEEEEEEECC
T ss_pred cccccccCCEEEEEEEEEcCCCCcceEEEEEEEEEEEc
Confidence 9976 899999999999988654 5666664
No 22
>1q55_A EP-cadherin, C-cadherin; trans interaction, desmosome, junction, adhesion, structural protein; HET: NAG NDG; 30.00A {Mus musculus} SCOP: i.20.1.1 PDB: 1q5a_A* 1q5b_A* 1q5c_A*
Probab=99.91 E-value=1.5e-23 Score=168.76 Aligned_cols=119 Identities=27% Similarity=0.401 Sum_probs=99.9
Q ss_pred EEEEEEcCCCce----eEEEEEEEecCCCCCcccCCceEEEEeCCCCCCcEEEEEEEECCCC-----CCcEEEEEEcCC-
Q psy6837 4 LTLNLAHKFGVI----GCVQLRILDRNDSPPSFADFHTEYTISEDVPVGTLVAKVKAIDPDL-----PGTIAYSLVAGD- 73 (122)
Q Consensus 4 l~~~~~~~~g~~----~~v~i~V~dvNdn~P~f~~~~~~~~v~E~~~~g~~v~~~~a~D~D~-----~~~i~y~l~~~~- 73 (122)
|++.+.+..|.+ ..+.|+|.|+|||+|.|.+..|.+.|+|++++|+.++++.|+|+|. |+.++|+|.++.
T Consensus 231 l~v~A~D~g~~~~~~~~~v~I~V~DvNDn~P~F~~~~y~~~V~En~~~Gt~V~~v~AtD~D~g~~~~N~~v~Ysi~~~~~ 310 (880)
T 1q55_A 231 LSSHAVSENGSPVEEPMEITINVIDQNDNRPKFTQDVFRGSVREGVQPGTQVMAVSATDEDDNIDSLNGVLSYSILKQDP 310 (880)
T ss_dssp EEEEEEESSSCBCSCCEEEEEEEECCSCCCCEESSSCEEEEEETTCCSSEEEEECCEECCSCCSSSSTTCCEEEEEEESS
T ss_pred EEEEEEECCCCceeeeEEEEEEEEecCCCCCCccCCcEEEEEeCCCCCCceeEEEEEEcCCCCCCCcCcEEEEEEcCCCC
Confidence 444444443322 3899999999999999999999999999999999999999999996 378999998764
Q ss_pred ----CCcEEEECCccEEEEc-ccCCccCCCEEEEEEEEEeCCCCcee-----EEEEEcC
Q psy6837 74 ----EGKFVLESSSGNLKLK-DTLDREQKDKYRVQVRASDGVQSADV-----VLTILNC 122 (122)
Q Consensus 74 ----~~~f~i~~~~G~i~~~-~~Ld~e~~~~~~l~v~a~D~g~~~~~-----~v~I~d~ 122 (122)
.++|.|++.+|.|++. +.||||....|.|.|.|+|+|.|+.+ +|+|.|+
T Consensus 311 ~~~~~~~F~Id~~tG~I~~~~~~LDrE~~~~y~l~V~A~D~g~~~~s~~~~v~I~V~Dv 369 (880)
T 1q55_A 311 EEPIPNLFTINRETGVISLIGTGLDREKFPEYTLTVQATDLEGAGLSVEGKAIIQITDA 369 (880)
T ss_dssp CCSCSCSEEECTTTCEEEECSCCCCTTTCCEEEEEEEEEHHHHTSCEEECCEEEEEECC
T ss_pred CcccCCeEEEccCCccEEEecccCCHHHcceeEEEEEEEECCCCCccceeEEEEEEEec
Confidence 3689999999999985 78999999999999999996655432 6777764
No 23
>1l3w_A EP-cadherin, C-cadherin; cell adhesion, calcium binding, extracellular, ECT metal binding protein; HET: NAG NDG; 3.08A {Xenopus laevis} SCOP: b.1.6.1 b.1.6.1 b.1.6.1 b.1.6.1 b.1.6.1
Probab=99.90 E-value=9.3e-24 Score=162.61 Aligned_cols=100 Identities=23% Similarity=0.333 Sum_probs=93.3
Q ss_pred eeEEEEEEEecCCCCCcccCCceEEEEeCCCCCCcEEEEEEEECCCC--CCcEEEEEEcCCCCcEEEECCccEEEEcccC
Q psy6837 15 IGCVQLRILDRNDSPPSFADFHTEYTISEDVPVGTLVAKVKAIDPDL--PGTIAYSLVAGDEGKFVLESSSGNLKLKDTL 92 (122)
Q Consensus 15 ~~~v~i~V~dvNdn~P~f~~~~~~~~v~E~~~~g~~v~~~~a~D~D~--~~~i~y~l~~~~~~~f~i~~~~G~i~~~~~L 92 (122)
.+++.|.|.|+|| +|.|.+..|.+.|+|+.++|+.++++.|+|+|. ++.++|+|.++..++|.|++.+|.|++.++|
T Consensus 322 ~~~v~I~V~DvND-~P~f~~~~y~~~V~En~~~g~~v~~v~A~D~D~g~n~~i~ysi~~~~~~~F~Id~~tG~i~~~~~l 400 (546)
T 1l3w_A 322 TATVTVTVEDVNE-APFFVPAVSRVDVSEDLSRGEKIISLVAQDPDKQQIQKLSYFIGNDPARWLTVNKDNGIVTGNGNL 400 (546)
T ss_dssp CEEEEEEEECCCC-CCEESSCEECCCBCTTCCSSEEEEECCEECCCTTCCCCEEEEECCCSSCCCEEETTTTEEEECSCC
T ss_pred eEEEEEEEEcCCC-CCcEecceEEEEEeCCCCCCCEEEEEEEECCCCCCCceEEEEECCCCCCcEEEeCCcEEEEECCcc
Confidence 3499999999999 999999999999999999999999999999998 8899999998777899999999999999999
Q ss_pred CccCC----CEEEEEEEEEeCCCCcee
Q psy6837 93 DREQK----DKYRVQVRASDGVQSADV 115 (122)
Q Consensus 93 d~e~~----~~~~l~v~a~D~g~~~~~ 115 (122)
|||.. ..|.|.|.|+|+|.|+++
T Consensus 401 D~E~~~~~~~~y~l~V~a~D~g~p~~s 427 (546)
T 1l3w_A 401 DRESEYVKNNTYTVIMLVTDDGVSVGT 427 (546)
T ss_dssp CTTSSSCCSSCCEEEEEEEECSSSCCC
T ss_pred CCccccCCCCEEEEEEEEEECCCCCcE
Confidence 99997 899999999998877544
No 24
>3ubh_A Neural-cadherin; cell adhesion; 2.70A {Drosophila melanogaster}
Probab=99.89 E-value=2.4e-22 Score=150.47 Aligned_cols=104 Identities=25% Similarity=0.325 Sum_probs=90.4
Q ss_pred EEEEEEEecCCCCCcccCCceEEEEeCCCCCCcEEEEEEEECCCCCCcEEEEEEc-C-CCCcEEEECCccEEEEcccCCc
Q psy6837 17 CVQLRILDRNDSPPSFADFHTEYTISEDVPVGTLVAKVKAIDPDLPGTIAYSLVA-G-DEGKFVLESSSGNLKLKDTLDR 94 (122)
Q Consensus 17 ~v~i~V~dvNdn~P~f~~~~~~~~v~E~~~~g~~v~~~~a~D~D~~~~i~y~l~~-~-~~~~f~i~~~~G~i~~~~~Ld~ 94 (122)
.+.|.|.| |||+|.|.+..|.+.|+||.++|+.++++.|.|+| ++.++|+|.. + ..++|.|++.+|.|++.++|||
T Consensus 205 ~v~I~V~d-ndn~P~F~~~~y~~~v~En~~~gt~v~~v~A~D~d-n~~i~Ysi~~~~~~~~~F~I~~~tG~i~~~~~LD~ 282 (419)
T 3ubh_A 205 EERLSIVG-GKRAPQFYMPSYEAEIPENQKKDSDIISIKAKSFA-DREIRYTLKAQGQGAGTFNIGPTSGIVKLAKELDF 282 (419)
T ss_dssp CEEEEEEE-SCCCCEESSSCEEEEEETTCCTTCEEEECCEECSS-CCCCEEEEEESSSCCSSEEECTTTCEEEECSCCCT
T ss_pred EEEEEEEC-CCCCCceecCeeEEEecCCCCCCcEEEEEEEecCC-CCceEEEEecCCCCCCcEEEECCCCEEEECcccCc
Confidence 78899999 99999999999999999999999999999999999 9999999973 3 4589999999999999999999
Q ss_pred cCCC---EEEEEEEEEeCCCCcee----EEEEEcC
Q psy6837 95 EQKD---KYRVQVRASDGVQSADV----VLTILNC 122 (122)
Q Consensus 95 e~~~---~~~l~v~a~D~g~~~~~----~v~I~d~ 122 (122)
|... .|.|.|.|+|++.+..+ +|+|.|+
T Consensus 283 E~~~~~~~y~l~V~a~dd~~~~s~~~~v~I~V~Dv 317 (419)
T 3ubh_A 283 EDLRQPHVYSLIVTATEDSGGFSTSVDLTIRVTDV 317 (419)
T ss_dssp TCTTSCSEEEEEEEEECTTTSCEEEEEEEEEEECC
T ss_pred cccccccEEEEEEEEEeCCCCcEEEEEEEEEEEcc
Confidence 9865 79999999963333222 6666664
No 25
>1q55_A EP-cadherin, C-cadherin; trans interaction, desmosome, junction, adhesion, structural protein; HET: NAG NDG; 30.00A {Mus musculus} SCOP: i.20.1.1 PDB: 1q5a_A* 1q5b_A* 1q5c_A*
Probab=99.89 E-value=6.3e-23 Score=165.07 Aligned_cols=100 Identities=23% Similarity=0.333 Sum_probs=93.4
Q ss_pred eeEEEEEEEecCCCCCcccCCceEEEEeCCCCCCcEEEEEEEECCCC--CCcEEEEEEcCCCCcEEEECCccEEEEcccC
Q psy6837 15 IGCVQLRILDRNDSPPSFADFHTEYTISEDVPVGTLVAKVKAIDPDL--PGTIAYSLVAGDEGKFVLESSSGNLKLKDTL 92 (122)
Q Consensus 15 ~~~v~i~V~dvNdn~P~f~~~~~~~~v~E~~~~g~~v~~~~a~D~D~--~~~i~y~l~~~~~~~f~i~~~~G~i~~~~~L 92 (122)
.++|+|+|.|+|| +|.|.+..|.+.|+|+.++|+.|+++.|+|+|. ++.++|+|.++..++|.|++.+|.|++.++|
T Consensus 471 t~tV~I~V~DvND-~P~f~~~~y~~~V~En~~~Gt~V~~v~A~D~D~g~n~~v~Ysi~~~~~~~F~Id~~tG~I~~~~~L 549 (880)
T 1q55_A 471 TATVTVTVEDVNE-APFFVPAVSRVDVSEDLSRGEKIISLVAQDPDKQQIQKLSYFIGNDPARWLTVNKDNGIVTGNGNL 549 (880)
T ss_dssp CEEEEEEEECCCC-CCEESSCEECCCBCTTCCSSEEEEECCEECCCTTCCCCEEEEECCCSSCCCEEETTTTEEEECSCC
T ss_pred eEEEEEEEEeCCC-CCEEecCceEEEEeCCCCCCCEEEEEEEEeCCCCCCCcEEEEECCCCCCCEEEeCCccEEEECCcc
Confidence 3499999999999 999999999999999999999999999999997 8899999998777899999999999999999
Q ss_pred CccCC----CEEEEEEEEEeCCCCcee
Q psy6837 93 DREQK----DKYRVQVRASDGVQSADV 115 (122)
Q Consensus 93 d~e~~----~~~~l~v~a~D~g~~~~~ 115 (122)
|||.. ..|+|.|.|+|+|.|+.+
T Consensus 550 DrE~~~~~~~~y~l~V~A~D~g~p~~s 576 (880)
T 1q55_A 550 DRESEYVKNNTYTVIMLVTDDGVSVGT 576 (880)
T ss_dssp CTTSSSCCSSCCEEEEEEEECSSSCCC
T ss_pred CcccccCCCCEEEEEEEEEECCCCCcE
Confidence 99997 899999999998876544
No 26
>2yqg_A Desmoglein-2, HDGC; cadherin, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.86 E-value=3.5e-22 Score=127.14 Aligned_cols=97 Identities=20% Similarity=0.244 Sum_probs=86.6
Q ss_pred cCCCCCcccCCceEEEEeCCCCCCcEEEEEEEECCCC--CCcEEEEEEcC-----CCCcEEEECCccEEEEcccCCccCC
Q psy6837 25 RNDSPPSFADFHTEYTISEDVPVGTLVAKVKAIDPDL--PGTIAYSLVAG-----DEGKFVLESSSGNLKLKDTLDREQK 97 (122)
Q Consensus 25 vNdn~P~f~~~~~~~~v~E~~~~g~~v~~~~a~D~D~--~~~i~y~l~~~-----~~~~f~i~~~~G~i~~~~~Ld~e~~ 97 (122)
.+.+.|.|....|.+.+.|++++|+.|+++. +|+|. |+.++|+|.++ ..++|.|++.+|.|++.++||||..
T Consensus 5 ~~r~~p~f~~~~~~v~e~e~~~~gt~v~~v~-~D~D~g~n~~i~Y~i~~~~~~~~~~~~F~Id~~tG~i~~~~~LDrE~~ 83 (123)
T 2yqg_A 5 SSGQKRAWITAPVALREGEDLSKKNPIAKIH-SDLAEERGLKITYKYTGKGITEPPFGIFVFNKDTGELNVTSILDREET 83 (123)
T ss_dssp SSCSCCSSCCCCEEEESSSCCCSSCCCBCCC-CHHHHHHTCCCEEEEEEBTTTBSSCSSEEEETTTTEEEECSCCBTTTB
T ss_pred ccccCCccCCCCEEEEecCCCCCCCEEEEEE-ECCCCCCCceEEEEEecCCCCCCcCCCEEEeCCcCEEEECcccCcccC
Confidence 4688999999999999999999999999999 69987 88999999975 2478999999999999999999999
Q ss_pred CEEEEEEEEEeCCCCcee-----EEEEEcC
Q psy6837 98 DKYRVQVRASDGVQSADV-----VLTILNC 122 (122)
Q Consensus 98 ~~~~l~v~a~D~g~~~~~-----~v~I~d~ 122 (122)
..|.|.|.|+|+|.|+++ +|+|.|+
T Consensus 84 ~~y~l~V~A~D~g~p~~~~~~~v~I~V~Dv 113 (123)
T 2yqg_A 84 PFFLLTGYALDARGNNVEKPLELRIKVLDI 113 (123)
T ss_dssp SEEEEEEEEECTTCCEEEEEECCEEEEECT
T ss_pred ceEEEEEEEEECCCCceEEEEEEEEEEEEc
Confidence 999999999998887654 6777764
No 27
>3mvs_A Cadherin-23, otocadherin; adhesion, extracellular domain, cell adhesion; 1.10A {Mus musculus} PDB: 4apx_A* 2whv_A 2wcp_A* 4aq8_A 4axw_A* 4aqe_A* 4aqa_A* 2wd0_A* 2wbx_A
Probab=99.85 E-value=1.4e-21 Score=134.44 Aligned_cols=95 Identities=26% Similarity=0.428 Sum_probs=84.5
Q ss_pred CCCCcccCCceE--EEEeCCCCCCcEEEEEEEECCCCCCcEEEEEEcCC-CCcEEEECCccEEEEcccCCccCCCEEEEE
Q psy6837 27 DSPPSFADFHTE--YTISEDVPVGTLVAKVKAIDPDLPGTIAYSLVAGD-EGKFVLESSSGNLKLKDTLDREQKDKYRVQ 103 (122)
Q Consensus 27 dn~P~f~~~~~~--~~v~E~~~~g~~v~~~~a~D~D~~~~i~y~l~~~~-~~~f~i~~~~G~i~~~~~Ld~e~~~~~~l~ 103 (122)
|++|.|.+..|. +.|+|++++|+.++++.|+|+| ++.++|+|.++. .++|.|++.+|.|++.++||||....|.|.
T Consensus 3 n~~P~F~~~~y~~~~~V~E~~~~Gt~v~~v~A~D~D-~~~~~y~i~~~~~~~~F~Id~~tG~i~~~~~LD~E~~~~y~l~ 81 (210)
T 3mvs_A 3 NRLPFFTNHFFDTYLLISEDTPVGSSVTQLLARDMD-NDPLVFGVSGEEASRFFAVEPDTGVVWLRQPLDRETKSEFTVE 81 (210)
T ss_dssp CCCCEECCGGGTSCEEEETTCCTTCEEEECCEECTT-CCCCEEEEESHHHHHHEEECTTTCEEEESSCCCTTTCCEEEEE
T ss_pred CCCCccCCCccceEEEEeCCCCCCCEEEEEEEEeCC-CCcEEEEEeCCCCCCcEEEeCCCCEEEECCccCCcccceEEEE
Confidence 559999999997 7999999999999999999999 788999998653 478999999999999999999999999999
Q ss_pred EEEEeCCCCcee--EEEEEcC
Q psy6837 104 VRASDGVQSADV--VLTILNC 122 (122)
Q Consensus 104 v~a~D~g~~~~~--~v~I~d~ 122 (122)
|.|+|++.+..+ +|+|.|+
T Consensus 82 v~a~D~~~~~~~~v~I~V~Dv 102 (210)
T 3mvs_A 82 FSVSDHQGVITRKVNIQVGDV 102 (210)
T ss_dssp EEEECSSCEEEEEEEEEEECC
T ss_pred EEEEeCCCCEEEEEEEEEEeC
Confidence 999998776655 5666664
No 28
>1zvn_A Mn-cadherin; strand dimer, ----; 2.16A {Gallus gallus}
Probab=99.85 E-value=1e-20 Score=116.24 Aligned_cols=77 Identities=23% Similarity=0.401 Sum_probs=69.2
Q ss_pred eEEEEeCCCC--CCcEEEEEEEECCCC-CCcEEEEEEcCCC-CcEEEECCccEEEEcccCCccCCCEEEEEEEEEeCCC-
Q psy6837 37 TEYTISEDVP--VGTLVAKVKAIDPDL-PGTIAYSLVAGDE-GKFVLESSSGNLKLKDTLDREQKDKYRVQVRASDGVQ- 111 (122)
Q Consensus 37 ~~~~v~E~~~--~g~~v~~~~a~D~D~-~~~i~y~l~~~~~-~~f~i~~~~G~i~~~~~Ld~e~~~~~~l~v~a~D~g~- 111 (122)
+.+.|+||.+ .|+.++++. +|+|. |+.++|+|.++.. +.|.|++.+|.|++.++||||+...|.|.|.|+|+|.
T Consensus 6 ~~~~v~En~~~~~g~~v~~v~-~D~D~gNg~v~Ysi~~~~~~~~F~Id~~tG~i~~~~~LDrE~~~~y~l~V~A~D~G~~ 84 (99)
T 1zvn_A 6 NQFFVLEEYTGTDPLYVGKLH-SDMDRGDGSIKYILSGEGAGIVFTIDDTTGDIHAIQRLDREERSQYTLRAQALDRRTG 84 (99)
T ss_dssp CEEEEEGGGCSSSCEEEEECC-BTTCCSSSCEEEEEEETTBTTTEEECTTTCEEEECSCCCTTTCSEEEEEEEEEETTTC
T ss_pred cEEEEECCCCCCCCcEEEEEE-ECCCCCCCEEEEEEeCCCCCceEEEeCCCCCEEECeecCCccCCeEEEEEEEEECCCC
Confidence 5789999976 689999999 99999 8999999987643 6899999999999999999999999999999999873
Q ss_pred Cce
Q psy6837 112 SAD 114 (122)
Q Consensus 112 ~~~ 114 (122)
|++
T Consensus 85 p~l 87 (99)
T 1zvn_A 85 RPM 87 (99)
T ss_dssp CBS
T ss_pred CCc
Confidence 543
No 29
>3k6d_A T-cadherin; cell adhesion; 1.80A {Xenopus laevis} PDB: 2v37_A
Probab=99.85 E-value=9.7e-21 Score=116.28 Aligned_cols=77 Identities=23% Similarity=0.327 Sum_probs=69.6
Q ss_pred eEEEEeCCCCC--CcEEEEEEEECCCCCCcEEEEEEcC-----CCCcEEEECCccEEEEcccCCccCCCEEEEEEEEEeC
Q psy6837 37 TEYTISEDVPV--GTLVAKVKAIDPDLPGTIAYSLVAG-----DEGKFVLESSSGNLKLKDTLDREQKDKYRVQVRASDG 109 (122)
Q Consensus 37 ~~~~v~E~~~~--g~~v~~~~a~D~D~~~~i~y~l~~~-----~~~~f~i~~~~G~i~~~~~Ld~e~~~~~~l~v~a~D~ 109 (122)
+.++|+||.++ |+.++++.|+|+|. .++|+|.+. ..+.|.|++.+|.|++.++||||....|.|.|.|+|+
T Consensus 5 ~~~~V~En~~~~~g~~v~~v~A~D~D~--~i~Ysi~~~~~~~~~~~~F~Id~~tG~i~~~~~LDrE~~~~y~l~V~A~D~ 82 (99)
T 3k6d_A 5 PSISIPENQRIPFPKIVGRVVVSDRIP--GSKIKLYGKGVDQEPKGIFKINENSGEVSVTKALDREAIPSYQLQVETTDE 82 (99)
T ss_dssp CCEEEETTCCSCSSEEEEECBCSSCCT--TCEEEEESBTTTBSSTTSEEECTTTCEEEECSCCCTTTCCEEEEEEEEECT
T ss_pred CcEEEeCCCCCCCCcEEEEEEEECCCC--cEEEEEecCcCCCCCCCEEEEECCceEEEECcCCCcccCceEEEEEEEEEC
Confidence 47899999999 99999999999994 899999852 2378999999999999999999999999999999998
Q ss_pred CCCcee
Q psy6837 110 VQSADV 115 (122)
Q Consensus 110 g~~~~~ 115 (122)
|.|+.+
T Consensus 83 g~~~l~ 88 (99)
T 3k6d_A 83 NGKTIE 88 (99)
T ss_dssp TCCEEE
T ss_pred CCCcee
Confidence 888754
No 30
>1zxk_A Cadherin-8; strand dimer, cell adhesion; 2.00A {Mus musculus} PDB: 2a4c_A
Probab=99.84 E-value=1.4e-20 Score=115.32 Aligned_cols=76 Identities=24% Similarity=0.358 Sum_probs=67.0
Q ss_pred eEEEEeCCCC--CCcEEEEEEEECCCC-CCcEEEEEEcCC-CCcEEEECCccEEEEcccCCccCCCEEEEEEEEEeCCC-
Q psy6837 37 TEYTISEDVP--VGTLVAKVKAIDPDL-PGTIAYSLVAGD-EGKFVLESSSGNLKLKDTLDREQKDKYRVQVRASDGVQ- 111 (122)
Q Consensus 37 ~~~~v~E~~~--~g~~v~~~~a~D~D~-~~~i~y~l~~~~-~~~f~i~~~~G~i~~~~~Ld~e~~~~~~l~v~a~D~g~- 111 (122)
+.++|+||.+ .|+.++++. +|+|. |+.++|+|.++. .+.|.|++.+|.|++.++||||..+.|.|.|.|+|+|.
T Consensus 5 ~~~~v~En~~~p~~~~v~~v~-~D~D~gN~~v~Ysi~~~~~~~~F~Id~~tG~i~~~~~LDrE~~~~y~l~v~A~D~g~~ 83 (98)
T 1zxk_A 5 NQMFVLEEFSGPEPILVGRLH-TDLDPGSKKIKYILSGDGAGTIFQINDITGDIHAIKRLDREEKAEYTLTAQAVDFETN 83 (98)
T ss_dssp CEEEECGGGCSSSCEEEEECC-BCCCCC--CEEEEEEETTBTTTEEECTTTCEEEECSCCCTTTCSEEEEEEEEEETTTC
T ss_pred ceEEEECCCCCCCCeEEEEEE-ECCCCCCCEEEEEEeCCCCCCEEEEECCccEEEECccCCCcCCCeEEEEEEEEECCCC
Confidence 5789999995 899999997 99998 789999998764 35899999999999999999999999999999999876
Q ss_pred Cc
Q psy6837 112 SA 113 (122)
Q Consensus 112 ~~ 113 (122)
|+
T Consensus 84 ~~ 85 (98)
T 1zxk_A 84 KP 85 (98)
T ss_dssp CB
T ss_pred CC
Confidence 43
No 31
>2omz_B Epithelial-cadherin; leucine-rich-repeat, nvasion protein, IG-like domain, adhesi protein, cell invasion-cell adhesion complex; 1.60A {Homo sapiens} SCOP: b.1.6.1 PDB: 2omt_B 2omu_B 2omv_B 1o6s_B 2omy_B 2omx_B 3ff8_A 3ff7_A 2omw_B
Probab=99.84 E-value=1.2e-20 Score=117.06 Aligned_cols=84 Identities=24% Similarity=0.389 Sum_probs=71.5
Q ss_pred EEEEeCCCC--CCcEEEEEEEECCCCCCcEEEEEEcCC-----CCcEEEECCccEEEEcccCCccCCCEEEEEEEEEeCC
Q psy6837 38 EYTISEDVP--VGTLVAKVKAIDPDLPGTIAYSLVAGD-----EGKFVLESSSGNLKLKDTLDREQKDKYRVQVRASDGV 110 (122)
Q Consensus 38 ~~~v~E~~~--~g~~v~~~~a~D~D~~~~i~y~l~~~~-----~~~f~i~~~~G~i~~~~~Ld~e~~~~~~l~v~a~D~g 110 (122)
.+.|+||.+ .|..++++.| |.+.|+.++|+|.++. .+.|.|++.+|.|++.++||||....|.|.|.|+|+|
T Consensus 10 ~~~V~En~~~~~~~~v~~v~A-d~g~N~~i~Ysi~~~~~~~~~~~~F~Id~~tG~I~~~~~LDrE~~~~y~l~V~A~D~g 88 (105)
T 2omz_B 10 PISCPENEKGPFPKNLVQIKS-NKDKEGKVFYSITGQGADTPPVGVFIIERETGWLKVTEPLDRERIATYTLFSHAVSSN 88 (105)
T ss_dssp CCCEESSCCSSSSEEEEECEE-GGGGSSCCEEEEEEBTTTBSSTTSEEECTTTCEEEECSCCCTTTCCEEEEEEEEECTT
T ss_pred CEEEeCCCCCCCCcEEEEEEC-CCCCCCeEEEEEeCCCCCCCccCEEEEeCCCCEEEECccCCcCCCCeEEEEEEEEECC
Confidence 578999999 5889999999 4445999999998754 3589999999999999999999999999999999988
Q ss_pred CCcee-----EEEEEcC
Q psy6837 111 QSADV-----VLTILNC 122 (122)
Q Consensus 111 ~~~~~-----~v~I~d~ 122 (122)
.|+.+ +|+|.|+
T Consensus 89 ~p~~~~~~~v~I~V~Dv 105 (105)
T 2omz_B 89 GNAVEDPMEILITVTDQ 105 (105)
T ss_dssp SCBSSCCEEEEEEEEC-
T ss_pred CCceeeEEEEEEEEEeC
Confidence 77643 6667764
No 32
>3k6f_A T-cadherin; cell adhesion, calcium, cell membrane, cleavage on PAIR of basic residues, glycoprotein, GPI-anchor, lipoprotein, membrane; 1.81A {Mus musculus}
Probab=99.83 E-value=5.3e-20 Score=113.15 Aligned_cols=76 Identities=24% Similarity=0.309 Sum_probs=68.7
Q ss_pred EEEEeCCCCC--CcEEEEEEEECCCCCCcEEEEEEcC-----CCCcEEEECCccEEEEcccCCccCCCEEEEEEEEEeCC
Q psy6837 38 EYTISEDVPV--GTLVAKVKAIDPDLPGTIAYSLVAG-----DEGKFVLESSSGNLKLKDTLDREQKDKYRVQVRASDGV 110 (122)
Q Consensus 38 ~~~v~E~~~~--g~~v~~~~a~D~D~~~~i~y~l~~~-----~~~~f~i~~~~G~i~~~~~Ld~e~~~~~~l~v~a~D~g 110 (122)
.+.|+||.+. |+.++++.|+|+|. .++|+|.+. ..+.|.|++.+|.|++.++||||....|.|.|.|+|+|
T Consensus 7 ~~~V~EN~~~~~g~~v~~V~A~D~D~--~i~Ysi~~~~~~~~~~~~F~Id~~tG~i~~~~~LDrE~~~~y~l~V~A~D~g 84 (100)
T 3k6f_A 7 PILIPENQRQPFPRDVGKVVDSDRPE--GSKFRLTGKGVDQDPKGTFRINENTGSVSVTRTLDRETIATYQLYVETTDAS 84 (100)
T ss_dssp CEEEETTCCSSSCEEEEECEETTCCT--TCEEEEEEBTTTBSSTTSEEECTTTCEEEECSCCCTTTCSEEEEEEEEECTT
T ss_pred cEEEeCCCCCCCCcEEEEEEEEcCCC--CEEEEEeCCCCCCCcCCEEEEECCCCEEEECcccCCcCCCEEEEEEEEEECC
Confidence 6899999998 89999999999994 899999853 23789999999999999999999999999999999988
Q ss_pred CCcee
Q psy6837 111 QSADV 115 (122)
Q Consensus 111 ~~~~~ 115 (122)
.|+++
T Consensus 85 ~p~l~ 89 (100)
T 3k6f_A 85 GKTLE 89 (100)
T ss_dssp CCEEE
T ss_pred CCccc
Confidence 88754
No 33
>3k6i_A T-cadherin; cell adhesion, alternative splicing, calcium, cell membrane, cleavage on PAIR of basic residues, glycoprotein, GPI-anchor, lipoprotein; 1.13A {Gallus gallus}
Probab=99.83 E-value=8.4e-20 Score=112.05 Aligned_cols=76 Identities=22% Similarity=0.260 Sum_probs=68.4
Q ss_pred EEEEeCCCCCC--cEEEEEEEECCCCCCcEEEEEEcC-----CCCcEEEECCccEEEEcccCCccCCCEEEEEEEEEeCC
Q psy6837 38 EYTISEDVPVG--TLVAKVKAIDPDLPGTIAYSLVAG-----DEGKFVLESSSGNLKLKDTLDREQKDKYRVQVRASDGV 110 (122)
Q Consensus 38 ~~~v~E~~~~g--~~v~~~~a~D~D~~~~i~y~l~~~-----~~~~f~i~~~~G~i~~~~~Ld~e~~~~~~l~v~a~D~g 110 (122)
.+.|+||.+.| +.++++.|+|+|. .++|+|.+. ..+.|.|++.+|.|++.++||||....|.|.|.|+|+|
T Consensus 6 ~~~v~EN~~~g~~~~v~~V~A~D~D~--~i~Ysi~~~~~~~~~~~~F~Id~~tG~i~~~~~LDrE~~~~y~l~v~A~D~g 83 (99)
T 3k6i_A 6 PILIPENQRPPFPRSVGKVIRSEGTE--GAKFRLSGKGVDQDPKGIFRINEISGDVSVTRPLDREAIANYELEVEVTDLS 83 (99)
T ss_dssp CEEEETTCCSSSCEEEEECEETTCCS--SEEEEEESBTTTBSSTTSEEECTTTCEEEECSCCCTTTCCEEEEEEEEEETT
T ss_pred cEEEeCCCCCCCCeEEEEEEEEcCCC--eEEEEEeCCCCCCCcCCEEEEECCCcEEEECcccCCccCCEEEEEEEEEECC
Confidence 57999999987 8899999999994 999999853 23689999999999999999999999999999999988
Q ss_pred CCcee
Q psy6837 111 QSADV 115 (122)
Q Consensus 111 ~~~~~ 115 (122)
.|+.+
T Consensus 84 ~~~l~ 88 (99)
T 3k6i_A 84 GKIID 88 (99)
T ss_dssp SCEEE
T ss_pred CCcee
Confidence 88654
No 34
>1ncg_A N-cadherin; cell adhesion protein; 2.10A {Mus musculus} SCOP: b.1.6.1 PDB: 1nch_A 1nci_A
Probab=99.81 E-value=8.3e-20 Score=114.04 Aligned_cols=86 Identities=19% Similarity=0.300 Sum_probs=68.9
Q ss_pred ceEEEEeCCCCCCcE--EEEEEEECCCCCCcEEEEEEcC-----CCCcEEEECCccEEEEcccCCccCCCEEEEEEEEEe
Q psy6837 36 HTEYTISEDVPVGTL--VAKVKAIDPDLPGTIAYSLVAG-----DEGKFVLESSSGNLKLKDTLDREQKDKYRVQVRASD 108 (122)
Q Consensus 36 ~~~~~v~E~~~~g~~--v~~~~a~D~D~~~~i~y~l~~~-----~~~~f~i~~~~G~i~~~~~Ld~e~~~~~~l~v~a~D 108 (122)
.|.++|+||+++|+. ++++ +.|.+.|+.++|+|.++ ..++|.|++.+|.|++.++||||....|.|.|.|+|
T Consensus 6 ~~~~~v~En~~~gt~~~v~~v-d~D~g~n~~i~Y~i~~~~~~~~~~~~F~Id~~tG~i~~~~~LDrE~~~~y~l~V~A~D 84 (110)
T 1ncg_A 6 IPPINLPENSRGPFPQELVRI-RSGRDKNLSLRYSVTGPGADQPPTGIFIINPISGQLSVTKPLDRELIARFHLRAHAVD 84 (110)
T ss_dssp CCCEEECSSCCCCSSEEEEEC-CCGGGGGSCCEEEEESBTTTBSSTTSEEECTTTCEEEECSCCCTTTCCEEEEEEEEEC
T ss_pred eeeEEEeCCCCCCCcEEEEEE-eCCCCCCCEEEEEEeCCCCCCCcCCEEEEECCCCEEEECCcCCcccCCeEEEEEEEEE
Confidence 468999999999994 5555 33444489999999963 247899999999999999999999999999999999
Q ss_pred CCCCcee-----EEEEEcC
Q psy6837 109 GVQSADV-----VLTILNC 122 (122)
Q Consensus 109 ~g~~~~~-----~v~I~d~ 122 (122)
+|.|+++ +|+|.|+
T Consensus 85 ~g~p~~~~~~~v~I~V~Dv 103 (110)
T 1ncg_A 85 INGNQVENPIDIVINVIDM 103 (110)
T ss_dssp TTSCBCSCCEEEEEEEC--
T ss_pred CCCCceeeEEEEEEEEEEC
Confidence 8876543 5556553
No 35
>2qvi_A Cadherin-2; beta barrel, strand SWAP, domain SWAP, calcium, cell adhesion, cleavage on PAIR of basic residues, glycoprotein, membrane; 3.01A {Mus musculus} SCOP: b.1.6.1 b.1.6.1 PDB: 1ncj_A
Probab=99.72 E-value=7.6e-17 Score=111.16 Aligned_cols=84 Identities=21% Similarity=0.383 Sum_probs=73.1
Q ss_pred EEEEeCCCCCCcEEEEEEEECCCC--CCcEEEEEEcCC-----CCcEEEECCccEEEEcccCCccCCCEEEEEEEEEeCC
Q psy6837 38 EYTISEDVPVGTLVAKVKAIDPDL--PGTIAYSLVAGD-----EGKFVLESSSGNLKLKDTLDREQKDKYRVQVRASDGV 110 (122)
Q Consensus 38 ~~~v~E~~~~g~~v~~~~a~D~D~--~~~i~y~l~~~~-----~~~f~i~~~~G~i~~~~~Ld~e~~~~~~l~v~a~D~g 110 (122)
.++|+||++ |+.++.+.+.|.|. ++.++|+|.++. .++|.|++.+|.|++.++||||....|.|.|.|+|+|
T Consensus 6 ~~~V~En~~-g~~~~~v~~~~~D~~~n~~v~Ysi~~~~~~~~~~~~F~Id~~tG~i~~~~~LDrE~~~~y~l~v~a~D~g 84 (215)
T 2qvi_A 6 PINLPENSR-GPFPQELVRIRSDRDKNLSLRYSVTGPGADQPPTGIFIINPISGQLSVTKPLDRELIARFHLRAHAVDIN 84 (215)
T ss_dssp CEEEESSCC-CCSSEEEEECCCGGGGTSCEEEEEESTTSSSTTCSSEEECTTTCEEEECSCCCTTTCSEEEEEEEEEETT
T ss_pred cEEEcCCCC-CCCCEEEEEEeCCCCCCceEEEEEECCCCCCCCCCcEEEeCCccEEEECcccCcccCCeEEEEEEEEECC
Confidence 689999998 88888898988887 899999999753 4789999999999999999999999999999999988
Q ss_pred CCcee-----EEEEEcC
Q psy6837 111 QSADV-----VLTILNC 122 (122)
Q Consensus 111 ~~~~~-----~v~I~d~ 122 (122)
.|+.+ +|+|.|+
T Consensus 85 ~~~~~~~~~v~I~V~Dv 101 (215)
T 2qvi_A 85 GNQVENPIDIVINVIDM 101 (215)
T ss_dssp TCCCEEEEEEEEEEECC
T ss_pred CCceeeeEEEEEEEeEC
Confidence 77643 5666664
No 36
>2x2u_A Proto-oncogene tyrosine-protein kinase receptor RET; hirschsprung disease, extracellular domain, disease mutation, transferase, glycoprotein; HET: NAG SO4; 2.00A {Homo sapiens}
Probab=99.72 E-value=1.4e-18 Score=122.07 Aligned_cols=92 Identities=16% Similarity=0.089 Sum_probs=72.4
Q ss_pred cccCCceEEEEeCCCCCCcEEEEEEEECCCCCCcEEEEEE----------cCCCCcEEEECCccEEEEcccCCccCCCEE
Q psy6837 31 SFADFHTEYTISEDVPVGTLVAKVKAIDPDLPGTIAYSLV----------AGDEGKFVLESSSGNLKLKDTLDREQKDKY 100 (122)
Q Consensus 31 ~f~~~~~~~~v~E~~~~g~~v~~~~a~D~D~~~~i~y~l~----------~~~~~~f~i~~~~G~i~~~~~Ld~e~~~~~ 100 (122)
.|.+..|.++|+|++++|+.|+++.|+|+|.+..+.|+|. .+..++|.|++.+|.|++.++||||....|
T Consensus 2 ~F~~~~Y~~~V~E~~~~Gt~v~~v~A~D~D~g~~~~~~i~~~~~~~y~i~~~~~~~F~Id~~tG~i~~~~~LDrE~~~~y 81 (246)
T 2x2u_A 2 YFSRDAYWEKLYVDQAAGTPLLYVHALRDAPEEVPSFRLGQHLYGTYRTRLHENNWIRIQEDTGLLYLQRSLDHSSWEKL 81 (246)
T ss_dssp EESCSEEEEEEETTBCTTCEEEECCEECSSTTCCCCCEECSEEECGGGCEEEECCSEEECTTTCEEEESSCBCHHHHHHH
T ss_pred CccCCceEEEeeCCCCCCCEEEEEEEEcCCCCCcceEEEeeccccceeccCCCCCEEEECCCcEEEEECCcCChhHhhhh
Confidence 5889999999999999999999999999997334445543 344579999999999999999999999999
Q ss_pred ------------EEEEEEEeCCCCc--e-----eEEEEEcC
Q psy6837 101 ------------RVQVRASDGVQSA--D-----VVLTILNC 122 (122)
Q Consensus 101 ------------~l~v~a~D~g~~~--~-----~~v~I~d~ 122 (122)
.|.|.|+|+|.|. . .+|+|.|+
T Consensus 82 ~~~~~G~p~~~~~l~V~a~D~g~~~~~~~~~~~v~I~V~Dv 122 (246)
T 2x2u_A 82 SVRNRGFPLLTVYLKVFLSPTSLREGECQWPGCARVYFSFF 122 (246)
T ss_dssp HHTSTTSCCCEEEEEEECC-------CCCTTTEEEEEEEEE
T ss_pred ccccCCCcccceEEEEEEEcCCCCCCcccceEEEEEEEEEC
Confidence 9999999987662 2 26667663
No 37
>3qrb_A Cadherin-1; cell adhesion; HET: PGE; 1.80A {Mus musculus} PDB: 1ff5_A 3lng_A 2qvf_B 1edh_A 3lne_A 1q1p_A 3lni_A 3q2l_A* 3q2n_A* 3lnh_A 3lnf_A 2o72_A 1suh_A
Probab=99.70 E-value=1.3e-16 Score=109.70 Aligned_cols=85 Identities=25% Similarity=0.354 Sum_probs=72.9
Q ss_pred eEEEEeCCCC--CCcEEEEEEEECCCCCCcEEEEEEcCC-----CCcEEEECCccEEEEcccCCccCCCEEEEEEEEEeC
Q psy6837 37 TEYTISEDVP--VGTLVAKVKAIDPDLPGTIAYSLVAGD-----EGKFVLESSSGNLKLKDTLDREQKDKYRVQVRASDG 109 (122)
Q Consensus 37 ~~~~v~E~~~--~g~~v~~~~a~D~D~~~~i~y~l~~~~-----~~~f~i~~~~G~i~~~~~Ld~e~~~~~~l~v~a~D~ 109 (122)
..++|+||.+ .|+.++++.| |+|.++.++|+|.++. .++|.|++.+|.|++.++||||....|.|.|.|+|+
T Consensus 5 ~~~~V~En~~~~~~~~v~~v~a-D~d~n~~v~Ysi~~~~~~~~~~~~F~Id~~tG~i~~~~~LDrE~~~~y~l~v~a~D~ 83 (213)
T 3qrb_A 5 AAISCPENEKGEFPKNLVQIKS-NRDKETKVFYSITGQGADKPPVGVFIIERETGWLKVTQPLDREAIAKYILYSHAVSS 83 (213)
T ss_dssp EEEEEETTCCSSSSEEEEECCC-GGGGTSCEEEEEESBTTTBSSTTSEEECTTTCEEEECSCCCTTTCSEEEEEEEEEET
T ss_pred CCEEEeCCCCCCCCcEEEEEEE-CCCCCceEEEEEEcCCCCCCCCCeEEEECCCCEEEECCccCcccCceEEEEEEEEeC
Confidence 3799999999 6788999999 8888999999999742 258999999999999999999999999999999997
Q ss_pred CCCcee-----EEEEEcC
Q psy6837 110 VQSADV-----VLTILNC 122 (122)
Q Consensus 110 g~~~~~-----~v~I~d~ 122 (122)
|.|+.+ +|+|.|+
T Consensus 84 ~~~~~~~~~~v~I~V~Dv 101 (213)
T 3qrb_A 84 NGEAVEDPMEIVITVTDQ 101 (213)
T ss_dssp TSCBCSCCEEEEEEEECC
T ss_pred CCCcccceEEEEEEEEEc
Confidence 765542 6667664
No 38
>2a4e_A Cadherin-11; dimer, calcium binding, cell adhesion; 3.20A {Mus musculus}
Probab=99.70 E-value=2.5e-16 Score=108.65 Aligned_cols=86 Identities=27% Similarity=0.444 Sum_probs=72.5
Q ss_pred ceEEEEeCCC--CCCcEEEEEEEECCCC-CCcEEEEEEcCC-CCcEEEECCccEEEEcccCCccCCCEEEEEEEEEeCCC
Q psy6837 36 HTEYTISEDV--PVGTLVAKVKAIDPDL-PGTIAYSLVAGD-EGKFVLESSSGNLKLKDTLDREQKDKYRVQVRASDGVQ 111 (122)
Q Consensus 36 ~~~~~v~E~~--~~g~~v~~~~a~D~D~-~~~i~y~l~~~~-~~~f~i~~~~G~i~~~~~Ld~e~~~~~~l~v~a~D~g~ 111 (122)
.|.+.|+|+. |.|+.++++ |+|+|. ++.++|+|.++. .++|.|++.+|.|++.++||||....|.|.|.|+|++.
T Consensus 5 ~~~~~v~En~~~p~~~~v~~v-a~D~D~gn~~i~Y~l~~~~~~~~F~Id~~tG~i~~~~~LDrE~~~~y~l~v~a~D~~~ 83 (215)
T 2a4e_A 5 WNQFFVIEEYTGPDPVLVGRL-HSDIDSGDGNIKYILSGEGAGTIFVIDDKSGNIHATKTLDREERAQYTLMAQAVDRDT 83 (215)
T ss_dssp CCEEEEETTCCSSSCEEEEEC-CCTTCCSSSCEEEEEEETTBTTTEEECTTTCEEEECSCCCTTTCSEEEEEEEEEETTT
T ss_pred EeeEEEeccCCCCCCEEEEEE-EECCCCCCCeEEEEEECCCCCCeEEEECCceEEEECCccCCccCCEEEEEEEEEECCC
Confidence 4689999994 578999888 899998 789999999764 46899999999999999999999999999999999764
Q ss_pred -Ccee-----EEEEEcC
Q psy6837 112 -SADV-----VLTILNC 122 (122)
Q Consensus 112 -~~~~-----~v~I~d~ 122 (122)
++.+ +|+|.|+
T Consensus 84 ~~~~~~~~~v~I~V~Dv 100 (215)
T 2a4e_A 84 NRPLEPPSEFIVKVQDI 100 (215)
T ss_dssp CCEEEEEEEEEEEEECC
T ss_pred CCcccccEEEEEEEeeC
Confidence 3322 5666664
No 39
>1wyj_A Protocadherin beta 14; SS bond, structural genomics, riken structural genomics/proteomics initiative, RSGI, NPPSFA; NMR {Mus musculus}
Probab=99.69 E-value=4.8e-18 Score=108.29 Aligned_cols=88 Identities=23% Similarity=0.336 Sum_probs=72.9
Q ss_pred CCceEEEEeCCCCCCcEEEEEEEECCCCC-CcE---EEEEEcC-CCCcEEEECCccEEEEcccCCccCC----CEEEEEE
Q psy6837 34 DFHTEYTISEDVPVGTLVAKVKAIDPDLP-GTI---AYSLVAG-DEGKFVLESSSGNLKLKDTLDREQK----DKYRVQV 104 (122)
Q Consensus 34 ~~~~~~~v~E~~~~g~~v~~~~a~D~D~~-~~i---~y~l~~~-~~~~f~i~~~~G~i~~~~~Ld~e~~----~~~~l~v 104 (122)
...|.++|+|+.++|+.|+++ |.|+|.+ +.+ +|+|.++ ..++|.|++.+|.|++.++||||.. ..|.|.+
T Consensus 10 ~~~~~~~V~E~~~~Gt~V~~v-a~D~d~~~~~i~~~~Y~i~~~~~~~~F~Id~~tG~i~~~~~LDRE~~c~~~~~y~l~v 88 (125)
T 1wyj_A 10 SATITYSVLEETDRGSLVGNL-AKDLGLSLRELITRGAQILSKGNKQLLQLEQKSGNLLLKEKLDREELCGSTNPCILHF 88 (125)
T ss_dssp CCCCCEEECSSCCTTCEEEES-TTTTTCCHHHHHHTTCEEECSSSSCSEEECSSSSEEEESSCCCSTTTCTTCSSCCBCC
T ss_pred CceEEEEEECCCCCCCEEEEE-EecCCCCCCceeeEEEEEecCCCCCeEEEECCccEEEECccccchhhcccCCcEEEEE
Confidence 456788999999999999999 9999973 345 8999865 4579999999999999999999998 9999999
Q ss_pred EEEeCCCCcee--EEEEEcC
Q psy6837 105 RASDGVQSADV--VLTILNC 122 (122)
Q Consensus 105 ~a~D~g~~~~~--~v~I~d~ 122 (122)
.|.++.....+ +|+|.|+
T Consensus 89 ~a~~~~p~~~~~V~I~V~Dv 108 (125)
T 1wyj_A 89 QVLLKSPVQFIQGEIQLQDV 108 (125)
T ss_dssp EEEETTTTEEECCCEEECCC
T ss_pred EEEECCCCeEEEEEEEEEEc
Confidence 99985433322 6777764
No 40
>3k5r_A Cadherin 13; mouse, structural protein; 2.00A {Mus musculus} PDB: 3k5s_A
Probab=99.66 E-value=4.7e-16 Score=107.25 Aligned_cols=83 Identities=22% Similarity=0.303 Sum_probs=71.4
Q ss_pred EEEEeCCCCCC--cEEEEEEEECCCCCCcEEEEEEcC-----CCCcEEEECCccEEEEcccCCccCCCEEEEEEEEEeCC
Q psy6837 38 EYTISEDVPVG--TLVAKVKAIDPDLPGTIAYSLVAG-----DEGKFVLESSSGNLKLKDTLDREQKDKYRVQVRASDGV 110 (122)
Q Consensus 38 ~~~v~E~~~~g--~~v~~~~a~D~D~~~~i~y~l~~~-----~~~~f~i~~~~G~i~~~~~Ld~e~~~~~~l~v~a~D~g 110 (122)
.++|+||.+.| +.++++.|.|+|. .++|+|.++ ..++|.|++.+|.|++.++||||....|.|.|.|+|+|
T Consensus 7 ~~~V~En~~~g~~~~v~~v~a~D~d~--~i~Y~i~~~~~~~~~~~~F~Id~~tG~i~~~~~LDrE~~~~y~l~v~a~D~g 84 (218)
T 3k5r_A 7 PILIPENQRQPFPRDVGKVVDSDRPE--GSKFRLTGKGVDQDPKGTFRINENTGSVSVTRTLDRETIATYQLYVETTDAS 84 (218)
T ss_dssp CEEEETTCCSSCCEEEEECBCTTCCT--TCEEEEEEBTTTBSSTTSEEECTTTCEEEECSCCCTTTCSEEEEEEEEECSS
T ss_pred cEEEecCCCCCCCEEEEEEEecCCCc--eEEEEEEcCCCCCCCCCeEEEeCCceEEEECCcCCcccCCEEEEEEEEEECC
Confidence 78999999998 8899999998873 899999853 23799999999999999999999999999999999988
Q ss_pred CCcee-----EEEEEcC
Q psy6837 111 QSADV-----VLTILNC 122 (122)
Q Consensus 111 ~~~~~-----~v~I~d~ 122 (122)
.|+.+ +|+|.|+
T Consensus 85 ~~~~~~~~~v~I~V~Dv 101 (218)
T 3k5r_A 85 GKTLEGPVPLEVIVIDQ 101 (218)
T ss_dssp SCEEEEEEEEEEEEECT
T ss_pred CCceeeeEEEEEEEEeC
Confidence 77543 5666664
No 41
>3ppe_A Vascular endothelial cadherin; extracellular cadherin (EC) domain, beta barrel, IG-domain L domain swapped dimer interface; 2.10A {Gallus gallus}
Probab=99.64 E-value=2.7e-15 Score=102.54 Aligned_cols=84 Identities=17% Similarity=0.289 Sum_probs=70.7
Q ss_pred eEEEEeCCCCCC--cEEEEEEEECCCCCCcEEEEEEcCC-CCcEEEECCccEEEEcccCCccCCCEEEEEEEEEeCCCC-
Q psy6837 37 TEYTISEDVPVG--TLVAKVKAIDPDLPGTIAYSLVAGD-EGKFVLESSSGNLKLKDTLDREQKDKYRVQVRASDGVQS- 112 (122)
Q Consensus 37 ~~~~v~E~~~~g--~~v~~~~a~D~D~~~~i~y~l~~~~-~~~f~i~~~~G~i~~~~~Ld~e~~~~~~l~v~a~D~g~~- 112 (122)
..+.|+||.+.| ..++++. .|+|.+.. +|+|.++. .++|.|++.+|.|++.++||||....|.|.|.|+|+|.|
T Consensus 5 ~~~~V~En~~~~~~~~v~~v~-~D~D~g~~-~Y~i~~~~~~~~F~Id~~tG~i~~~~~LDrE~~~~y~l~v~a~D~g~~~ 82 (203)
T 3ppe_A 5 NRMHIREEIDSPLPHHVGKLT-SSVGNKNA-MYIIEGESANTIFKVQGYDGDIYAFERLDREKKAEYELTAHIIDRRNNR 82 (203)
T ss_dssp SEEEEETTCCSSSCEEEEECC-BCCCCTTE-EEEEEETTBTTTEEEETTTTEEEESSCCCTTTCCEEEEEEEEEETTTTE
T ss_pred ccEEEEccCCCCCCEEEEEEE-ecCCCCCc-EEEEecCCCCCeEEEECCcCEEEECccccccccceEEEEEEEEECCCCC
Confidence 479999999988 8888888 99997444 99999775 468999999999999999999999999999999998765
Q ss_pred c---ee--EEEEEcC
Q psy6837 113 A---DV--VLTILNC 122 (122)
Q Consensus 113 ~---~~--~v~I~d~ 122 (122)
+ .+ +|+|.|+
T Consensus 83 ~~~~~~~v~I~V~Dv 97 (203)
T 3ppe_A 83 SLEPPSKFIIKVSDI 97 (203)
T ss_dssp ECSCCEEEEEEEECC
T ss_pred cccceEEEEEEEcCC
Confidence 1 12 6667664
No 42
>3lnd_A CDH6 protein, cadherin 6; cell adhesion, cell membrane, membrane, transmembr; 2.82A {Mus musculus}
Probab=99.62 E-value=4e-16 Score=106.87 Aligned_cols=84 Identities=21% Similarity=0.402 Sum_probs=67.0
Q ss_pred EEEEeCCCCCC--cEEEEEEEECCCC-CCcEEEEEEcCCC-CcEEEECCccEEEEcccCCccCCCEEEEEEEEEeCC-CC
Q psy6837 38 EYTISEDVPVG--TLVAKVKAIDPDL-PGTIAYSLVAGDE-GKFVLESSSGNLKLKDTLDREQKDKYRVQVRASDGV-QS 112 (122)
Q Consensus 38 ~~~v~E~~~~g--~~v~~~~a~D~D~-~~~i~y~l~~~~~-~~f~i~~~~G~i~~~~~Ld~e~~~~~~l~v~a~D~g-~~ 112 (122)
.+.|+||.+.| +.++++ |+|+|. ++.++|+|.++.. ++|.|++.+|.|++.++||||....|.|.|.|+|++ .+
T Consensus 6 ~~~v~En~~~~~~~~v~~~-a~D~D~g~~~i~Y~l~~~~~~~~F~Id~~tG~i~~~~~LDrE~~~~y~l~v~a~D~~~~~ 84 (207)
T 3lnd_A 6 QFFLLEEYTGSDYQYVGKL-HSDQDRGDGSLKYILSGDGAGDLFIINENTGDIQATKRLDREEKPVYILRAQAVNRRTGR 84 (207)
T ss_dssp CEEEESCBCSSSCEEEEEC-CCTTCCSSTTBCCCCCSSSBTTTEEECTTTCEEEECSCCCGGGCCEEEC----CBSSSCC
T ss_pred ccEEEeecCCCCCEEEEEE-EeCCCCCCceEEEEEECCCCCCeEEEECCceEEEECCCcCcccCCEEEEEEEEEECCCCC
Confidence 67899999965 478888 899998 7889999986654 689999999999999999999999999999999965 33
Q ss_pred cee-----EEEEEcC
Q psy6837 113 ADV-----VLTILNC 122 (122)
Q Consensus 113 ~~~-----~v~I~d~ 122 (122)
+.+ +|+|.|+
T Consensus 85 ~~~~~~~v~I~V~Dv 99 (207)
T 3lnd_A 85 PVEPESEFIIKIHDI 99 (207)
T ss_dssp CCSCCCCCEEEEECC
T ss_pred ccccEEEEEEEECcc
Confidence 321 7778775
No 43
>1wuz_A Pcdha4 protein, CNR-EC1; cadherin, heteronuclear protocadherin, cell adhesion; NMR {Mus musculus}
Probab=99.57 E-value=2.4e-16 Score=97.19 Aligned_cols=87 Identities=16% Similarity=0.236 Sum_probs=65.6
Q ss_pred CceEEEEeCCCCCCcEEEEEEEECCCCC----CcEEEEEEcC-CCCcEEEECCccEEEEcccCCccCC----CEEEEEEE
Q psy6837 35 FHTEYTISEDVPVGTLVAKVKAIDPDLP----GTIAYSLVAG-DEGKFVLESSSGNLKLKDTLDREQK----DKYRVQVR 105 (122)
Q Consensus 35 ~~~~~~v~E~~~~g~~v~~~~a~D~D~~----~~i~y~l~~~-~~~~f~i~~~~G~i~~~~~Ld~e~~----~~~~l~v~ 105 (122)
..+.++|+|+.++|+.|+++ |.|+|.+ ..++|+|.++ ..++|.|++.+|.|++.++||||.. ..|.+.+.
T Consensus 3 ~~~~~~V~E~~~~Gt~Vg~v-a~D~~~~~~~~~~~~y~i~~~~~~~~F~Id~~tG~i~~~~~LDRE~~~~~~~~~~~~~~ 81 (103)
T 1wuz_A 3 SQIHYSIPEEAKHGTFVGRI-AQDLGLELTELVPRLFRVASKDRGDLLEVNLQNGILFVNSRIDREELCGRSAECSIHLE 81 (103)
T ss_dssp CEEEEEEESSCCTTCBCCCH-HHHHTCCHHHHTTTTBCCBCSSCSCSEEEETTTTEEEECSCCSHHHHCSSSSSCEEEEE
T ss_pred eeEEEEEECCCCCCCEEEEE-EeccCCCCcccccEEEEEEeCCCccEEEEECCeEEEEECCcCccccccCCCCcEEEEEE
Confidence 46789999999999999999 9999873 3688999865 3589999999999999999999975 23344444
Q ss_pred EEeCCCCcee--EEEEEcC
Q psy6837 106 ASDGVQSADV--VLTILNC 122 (122)
Q Consensus 106 a~D~g~~~~~--~v~I~d~ 122 (122)
+..+.....+ .|+|.|+
T Consensus 82 v~~~~p~~~~~v~I~V~Di 100 (103)
T 1wuz_A 82 VIVDRPLQVFHVEVEVRDI 100 (103)
T ss_dssp EEETTTTEEEEEEEEEECC
T ss_pred EEECCCCEEEEEEEEEEEc
Confidence 4433222223 6777764
No 44
>4apx_B Protocadherin-15, otocadherin; cell adhesion, hearing, deafness, CDH23, PCDH15; HET: MES; 1.65A {Mus musculus} PDB: 4aq8_C 4aqa_B* 4aqe_B* 4axw_B*
Probab=99.23 E-value=4.2e-11 Score=83.79 Aligned_cols=88 Identities=19% Similarity=0.134 Sum_probs=65.1
Q ss_pred CceEEEEeCCCCCCcEEEEEEEECCCC---CCcEEEEEEcCCCCcEEEECCccEEEEc---ccCCccCCCEEEEEEEE--
Q psy6837 35 FHTEYTISEDVPVGTLVAKVKAIDPDL---PGTIAYSLVAGDEGKFVLESSSGNLKLK---DTLDREQKDKYRVQVRA-- 106 (122)
Q Consensus 35 ~~~~~~v~E~~~~g~~v~~~~a~D~D~---~~~i~y~l~~~~~~~f~i~~~~G~i~~~---~~Ld~e~~~~~~l~v~a-- 106 (122)
+.+.+.|+|++++|+.+..+.+.|.+. ++.++|+|.+....+|.|++.+|.+.+. +.||||....|.+.+.+
T Consensus 20 P~~~vsV~E~sp~GTvv~~~~~~~~~d~~~n~~i~ysl~~~~~~~f~id~~tg~~~l~~t~~~LDrE~~~~~~~~~~~v~ 99 (242)
T 4apx_B 20 PATIVAIDEESRNGTILVDNMLIKGTAGGPDPTIELSLKDNVDYWVLLDPVKQMLFLNSTGRVLDRDPPMNIHSIVVQVQ 99 (242)
T ss_dssp SSEEEEEETTCCTTCEEESCCCBSSCBSSSSCSEEEEEESCGGGCEEEETTTTEEEECCTTSCCCCSTTTCCCEEEEEEE
T ss_pred CeEEEEeeCCCCCCCEEEEEEEecCCCCCCCCEEEEEEecCCCceEEECCCCCEEEEEecCCceeccCCCceEEEEEEEE
Confidence 357899999999999998755554443 7889999997777899999999999874 67999987766655444
Q ss_pred -EeCCCCcee----EEEEEcC
Q psy6837 107 -SDGVQSADV----VLTILNC 122 (122)
Q Consensus 107 -~D~g~~~~~----~v~I~d~ 122 (122)
.|.+.+..+ +|.|.|+
T Consensus 100 ~~~~~~~~~~~~~V~I~V~Dv 120 (242)
T 4apx_B 100 CVNKKVGTVIYHEVRIVVRDR 120 (242)
T ss_dssp EEETTTCCEEEEEEEEEEECC
T ss_pred eECCCCCeEEEEEEEEEEEeC
Confidence 444433322 5666664
No 45
>1wyj_A Protocadherin beta 14; SS bond, structural genomics, riken structural genomics/proteomics initiative, RSGI, NPPSFA; NMR {Mus musculus}
Probab=97.99 E-value=9.6e-07 Score=55.70 Aligned_cols=25 Identities=20% Similarity=0.270 Sum_probs=22.2
Q ss_pred eEEEEEEEecCCCCCcccCCceEEE
Q psy6837 16 GCVQLRILDRNDSPPSFADFHTEYT 40 (122)
Q Consensus 16 ~~v~i~V~dvNdn~P~f~~~~~~~~ 40 (122)
.+|.|.|+|+|||+|.|.+..|.++
T Consensus 99 ~~V~I~V~DvNDN~P~F~~~~y~vs 123 (125)
T 1wyj_A 99 IQGEIQLQDVNDHAPEFMEDESGPS 123 (125)
T ss_dssp ECCCEEECCCCCCCCCCCCCCCCCC
T ss_pred EEEEEEEEEccCCCCcCCCcEEEEe
Confidence 3789999999999999999988764
No 46
>1op4_A Neural-cadherin; beta sandwich, cadherin-like domain, cell adhesion; NMR {Mus musculus} SCOP: b.1.6.1
Probab=96.51 E-value=0.037 Score=36.02 Aligned_cols=79 Identities=14% Similarity=0.194 Sum_probs=61.1
Q ss_pred CCCCcccCCceEEEEeCCCCCCcEEEEEEEECCCCCCcEEEEEEcCCCCcEEEECCccEEEEcccCCccCCCEEEEEEEE
Q psy6837 27 DSPPSFADFHTEYTISEDVPVGTLVAKVKAIDPDLPGTIAYSLVAGDEGKFVLESSSGNLKLKDTLDREQKDKYRVQVRA 106 (122)
Q Consensus 27 dn~P~f~~~~~~~~v~E~~~~g~~v~~~~a~D~D~~~~i~y~l~~~~~~~f~i~~~~G~i~~~~~Ld~e~~~~~~l~v~a 106 (122)
...|-|....|...++-+...|..++++.-.|-..+..+.|.-. ++..|.|+ ..|.|+++..+-.-.. .-.|.|.|
T Consensus 31 ~C~pGF~~~~~~~~vp~~l~~g~~lgkV~F~dC~g~~~~~~~ss--Dp~dFkV~-~DGtVya~r~v~L~~~-~~~F~V~a 106 (159)
T 1op4_A 31 LCKTGFPEDVYSAVLPKDVHEGQPLLNVKFSNCNRKRKVQYESS--EPADFKVD-EDGTVYAVRSFPLTAE-QAKFLIYA 106 (159)
T ss_dssp CCCCBCCSCEEEECCCCSSCSSCCEEECCCBCCSSCCCEEEECC--CSSEEEEE-TTTEEEEESCCSCSSS-CEEEEEEE
T ss_pred cccCCcCcceeEEeccccccCCceeceeecccCCCCCceeEEcC--CCCCeEEe-CCCcEEEecceeecCC-CcEEEEEE
Confidence 46789999999888889999999999999888875666777543 33369998 7899999988654332 33788999
Q ss_pred EeC
Q psy6837 107 SDG 109 (122)
Q Consensus 107 ~D~ 109 (122)
.|.
T Consensus 107 ~D~ 109 (159)
T 1op4_A 107 QDK 109 (159)
T ss_dssp EET
T ss_pred EcC
Confidence 993
No 47
>2yhg_A SDE_182CT, cellulose-binding protein; hydrolase, glycoside hydrolase; HET: BTB; 1.08A {Saccharophagus degradans}
Probab=95.93 E-value=0.078 Score=39.85 Aligned_cols=57 Identities=19% Similarity=0.227 Sum_probs=39.2
Q ss_pred ECCCCCCcEEEEEEcCCC-----CcEEEE-CCccEEEEcccCCccCCCEEEEEEEEEeCCCCcee
Q psy6837 57 IDPDLPGTIAYSLVAGDE-----GKFVLE-SSSGNLKLKDTLDREQKDKYRVQVRASDGVQSADV 115 (122)
Q Consensus 57 ~D~D~~~~i~y~l~~~~~-----~~f~i~-~~~G~i~~~~~Ld~e~~~~~~l~v~a~D~g~~~~~ 115 (122)
+|+| ++.++|+-..-.. ....|. +....+..+.+-+ +....|.|+++++|++.|..+
T Consensus 365 sDPD-GD~LtY~W~q~~g~g~~~~~vtls~~~~~~~sft~P~~-~~~~tl~f~LtVTD~~~p~lT 427 (437)
T 2yhg_A 365 SDPD-GDSLNYSWSHYGEADSYSGSVSISNSSSASANVQIPSN-AGGKDIHILLTLRDNGSPNLY 427 (437)
T ss_dssp BCTT-CCCEEEEEEECTTTSSCCSCCCEETTTSSEEEEECCTT-CTTCEEEEEEEEEECSSSCCE
T ss_pred eCCC-CCeEEEEEEEeCCCCccccceEeecCCCceEEEEeCCC-CCCcEEEEEEEEEeCCCCCcc
Confidence 4888 8899998764321 246664 3445666665544 467899999999998876544
No 48
>2jtd_A Myomesin-1, skelemin; immunoglobulin domain, muscle protein, thick filament, immune system, cell adhesion; NMR {Mus musculus}
Probab=84.71 E-value=5.4 Score=24.96 Aligned_cols=81 Identities=19% Similarity=0.318 Sum_probs=56.3
Q ss_pred CCceEEEEeCCCCCCcEEEEEEEECCCCCCcEEEEEEc-----CCCCcEEEECCccEEEEc-ccCCccCCCEEEEEEEEE
Q psy6837 34 DFHTEYTISEDVPVGTLVAKVKAIDPDLPGTIAYSLVA-----GDEGKFVLESSSGNLKLK-DTLDREQKDKYRVQVRAS 107 (122)
Q Consensus 34 ~~~~~~~v~E~~~~g~~v~~~~a~D~D~~~~i~y~l~~-----~~~~~f~i~~~~G~i~~~-~~Ld~e~~~~~~l~v~a~ 107 (122)
.+...++|.|. |.+-++++|.-.-.+..++|-+.. ++.....+|..+|.|-.. ..|..|....|++.+ .
T Consensus 42 ksel~vEiLEk---G~VRfWlQaeklS~~a~~~~ifNdkei~~~~~~ki~fD~~tGiIEmime~~~~edeGTyT~Ql--q 116 (142)
T 2jtd_A 42 KSELAVEILEK---GQVRFWMQAEKLSSNAKVSYIFNEKEIFEGPKYKMHIDRNTGIIEMFMEKLQDEDEGTYTFQI--Q 116 (142)
T ss_dssp SCEEEEEEETT---TEEEEEEECSCCTTCCEEEEEETTEECCSSSSCCEEECSSSCCEEEEECCCCTTTCCEEEEEE--E
T ss_pred hhhhhHHHHhc---CcEEEEEEhhhcCCCceEEEEeccceeccCCCeeEeecccCChhhhhHhhcccccCceEEEEE--e
Confidence 45577888875 788888888655447778876532 234567889999998764 567767777777666 6
Q ss_pred eCCCCceeEEEE
Q psy6837 108 DGVQSADVVLTI 119 (122)
Q Consensus 108 D~g~~~~~~v~I 119 (122)
||.....+++.+
T Consensus 117 DGKAknQssLVL 128 (142)
T 2jtd_A 117 DGKATGHSTLVL 128 (142)
T ss_dssp ETTEEEEEEEEC
T ss_pred cCcccceeEEEE
Confidence 877666665543
No 49
>3pdd_A Glycoside hydrolase, family 9; CBHA, beta-sandwich, cellulosome, unknown function; 1.72A {Clostridium thermocellum} PDB: 3pdg_A
Probab=83.06 E-value=7.7 Score=25.43 Aligned_cols=93 Identities=12% Similarity=0.003 Sum_probs=47.1
Q ss_pred eEEEEEEcCCCcee---EEEEEEEecCCCCCcccCCceEEEEeCCCC---CC-cEEEEEEEECCCCCCcEEEEEEcCCCC
Q psy6837 3 DLTLNLAHKFGVIG---CVQLRILDRNDSPPSFADFHTEYTISEDVP---VG-TLVAKVKAIDPDLPGTIAYSLVAGDEG 75 (122)
Q Consensus 3 ~l~~~~~~~~g~~~---~v~i~V~dvNdn~P~f~~~~~~~~v~E~~~---~g-~~v~~~~a~D~D~~~~i~y~l~~~~~~ 75 (122)
.|++++.+..|... .+.|.|.+ ..+|.. .+.-|.+.. .| .+-....|.|.| ++--+|.+.-+. .
T Consensus 64 tlta~A~D~aGn~s~s~~v~vtV~~--~~~Ptv-----~itsP~~g~~~~~~~~vtl~~~AsD~~-g~V~~Ve~~~dg-~ 134 (190)
T 3pdd_A 64 NLKAVAVLSDGRRIESPVTPVLVKV--IVKPTV-----KLTAPKSNVVAYGNEFLKITATASDSD-GKISRVDFLVDG-E 134 (190)
T ss_dssp EEEEEEEETTSCEEECCCEEEEEEC--CCCCEE-----EEEECCTTCCCBTTSEEEEEEEEECSS-SCEEEEEEEETT-E
T ss_pred EEEEEEEECCCCEeeecceeEEecc--CCCCce-----eecCCCCCcEEecCCeEEEEEEEECCC-CcEEEEEEEECC-E
Confidence 45666666667664 47777765 336643 344555432 24 344567788876 322334333221 1
Q ss_pred cEEEECCccEEEEcccCCccCCCEEEEEEEEEe
Q psy6837 76 KFVLESSSGNLKLKDTLDREQKDKYRVQVRASD 108 (122)
Q Consensus 76 ~f~i~~~~G~i~~~~~Ld~e~~~~~~l~v~a~D 108 (122)
...-+. ++--...... ....|+|.++|.|
T Consensus 135 ~v~t~t-~~~y~~~~~~---~~G~~tl~a~A~D 163 (190)
T 3pdd_A 135 VIGSDR-EAPYEYEWKA---VEGNHEISVIAYD 163 (190)
T ss_dssp EEEEEC-SSSEEEEEEC---CSEEEEEEEEEEE
T ss_pred EEeccc-CCCEEEEEec---CCeeEEEEEEEEE
Confidence 111111 1111111111 4568999999999
No 50
>3rb5_A Na/Ca exchange protein; CBD12, calcium binding and regulation, metal binding protein; 2.35A {Drosophila melanogaster} PDB: 3rb7_A 3e9u_A
Probab=79.11 E-value=14 Score=26.05 Aligned_cols=67 Identities=22% Similarity=0.223 Sum_probs=41.3
Q ss_pred eEEEEEEcC-----CCceeEEEEEEEecCCCCCcccCCceEEEEeCCCCCCcEEEEEEEECCCC-CCcEEEEEEcC
Q psy6837 3 DLTLNLAHK-----FGVIGCVQLRILDRNDSPPSFADFHTEYTISEDVPVGTLVAKVKAIDPDL-PGTIAYSLVAG 72 (122)
Q Consensus 3 ~l~~~~~~~-----~g~~~~v~i~V~dvNdn~P~f~~~~~~~~v~E~~~~g~~v~~~~a~D~D~-~~~i~y~l~~~ 72 (122)
.+.+.+..- -|.+...+|+|.| ||++|.|.-..-.+.|.|+. |.....+.-...-. .-.+.|+...+
T Consensus 92 tF~v~Ls~p~~~a~lg~~~~atvtI~d-dD~~g~~~f~~~~~~V~E~~--g~~~~~V~Rs~~~~g~vtV~~~T~dG 164 (298)
T 3rb5_A 92 CFYIRLFNPSEGVKLAVPMIATVMILD-DDHAGIFAFTDSVFEITESV--GRFELKVMRYSGARGTVIVPYWTEND 164 (298)
T ss_dssp EEEEEEECCCTTCCBCSCSEEEEEEEC-CCCCCEEECSCSEEEECTTC--CCEEEEEEEESCCCSCEEEEEEEEEC
T ss_pred EEEEEEeCCCCCcEECCCceEEEEEec-cccccccccccccEEeecCC--ceEEEEEEEEecCCCCEEEEEEecCC
Confidence 455555543 2333367788887 57688876555578889985 66666665554322 44567876655
No 51
>3pe9_A Fibronectin(III)-like module; CBHA, beta-sandwich, cellulosome, unknown function; 1.69A {Clostridium thermocellum}
Probab=78.99 E-value=7.6 Score=22.80 Aligned_cols=48 Identities=19% Similarity=0.142 Sum_probs=26.8
Q ss_pred cEEEEEEEECCCC-CCcEEEEEEcC-----CCCcEEEECCccEEEEcccCCccCCCEEEEEEEEEe
Q psy6837 49 TLVAKVKAIDPDL-PGTIAYSLVAG-----DEGKFVLESSSGNLKLKDTLDREQKDKYRVQVRASD 108 (122)
Q Consensus 49 ~~v~~~~a~D~D~-~~~i~y~l~~~-----~~~~f~i~~~~G~i~~~~~Ld~e~~~~~~l~v~a~D 108 (122)
.+.....|.|.|. -.++.|.+.+. ...+|... . +.. ...|+|.++|+|
T Consensus 18 ~v~i~a~A~D~dg~V~kVef~vdg~~vg~dt~apy~~~---------w--~~~-~G~htl~a~AtD 71 (98)
T 3pe9_A 18 FLKITATASDSDGKISRVDFLVDGEVIGSDREAPYEYE---------W--KAV-EGNHEISVIAYD 71 (98)
T ss_dssp EEEEEEEECCSSSCEEEEEEEETTEEEEEECSSSEEEE---------E--ECC-SEEEEEEEEEEE
T ss_pred EEEEEEEEEeCCCCEEEEEEEECCEEecccccCCEEEE---------E--EcC-CccEEEEEEEEE
Confidence 4456677777763 33566655432 11222221 0 001 468999999999
No 52
>2kpn_A Bacillolysin; solution structure, BIG_3 domain, PF07523, PSI BIG-open NESG, cell WALL, hydrolase, peptidoglycan-anchor; NMR {Bacillus cereus atcc 14579}
Probab=66.91 E-value=7.7 Score=23.09 Aligned_cols=35 Identities=14% Similarity=0.248 Sum_probs=23.4
Q ss_pred EEcccCCccCCCEEEEEEEEEe-CCCCcee--EEEEEc
Q psy6837 87 KLKDTLDREQKDKYRVQVRASD-GVQSADV--VLTILN 121 (122)
Q Consensus 87 ~~~~~Ld~e~~~~~~l~v~a~D-~g~~~~~--~v~I~d 121 (122)
.+....|..+...|.++-.++| .|..... +|+|.+
T Consensus 48 ~V~g~Vdt~k~G~Y~VtY~VtDs~Gn~~t~trtVtV~~ 85 (103)
T 2kpn_A 48 KVDGEVDTTKAGTYVLTYTVTDSKGHEVTAKQTVTVKV 85 (103)
T ss_dssp EEESCCCSSSCEEEEEEEEEECTTSCEEEEEEEEEEEC
T ss_pred EEeCcccCCCceEEEEEEEEEcCCCCEEEEEEEEEEeC
Confidence 3345677777889999999999 4544333 555543
No 53
>2y72_A Collagenase, collagenase G; polycystic kidney disease domain, beta barrel, collagen RECO domain, hydrolase; 1.18A {Clostridium histolyticum} PDB: 3jqu_A 3js7_A
Probab=65.68 E-value=12 Score=20.89 Aligned_cols=55 Identities=20% Similarity=0.294 Sum_probs=30.1
Q ss_pred ECCCCCCcEEEEEEcCCCCcEEEECCccEEEEcccCCccCCCEEEEEEEEEeCC-CCcee--EEEEE
Q psy6837 57 IDPDLPGTIAYSLVAGDEGKFVLESSSGNLKLKDTLDREQKDKYRVQVRASDGV-QSADV--VLTIL 120 (122)
Q Consensus 57 ~D~D~~~~i~y~l~~~~~~~f~i~~~~G~i~~~~~Ld~e~~~~~~l~v~a~D~g-~~~~~--~v~I~ 120 (122)
.|+| +..+.|...-++.. .. ++.- ...-|.....|.+.+.++|+. ..... +|+|.
T Consensus 27 ~d~~-g~~~~y~W~fgdG~-~s----~~~~---~~hty~~~G~Y~v~LtVtd~~G~~~t~~~~V~V~ 84 (85)
T 2y72_A 27 KDED-GKIVSYDWDFGDGA-TS----RGKN---SVHAYKKAGTYNVTLKVTDDKGATATESFTIEIK 84 (85)
T ss_dssp BCTT-SCEEEEEEECSSSC-EE----ESSE---EEEECSSCEEEEEEEEEEETTSCEEEEEEEEEEE
T ss_pred cCCC-CCEEEEEEEECCCC-cc----cccc---eEEEcCCCeEEEEEEEEEECCCCEEEEEEEEEEc
Confidence 3444 55567877644322 11 1110 112356778999999999944 33333 55554
No 54
>2yrl_A KIAA1837 protein; PKD domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=60.55 E-value=15 Score=21.45 Aligned_cols=54 Identities=20% Similarity=0.305 Sum_probs=28.3
Q ss_pred CCCCcEEEEE--EcCCCCcEEEEC-CccEEEEcccCCccCCCEEEEEEEEEeCC-CCceeEEEE
Q psy6837 60 DLPGTIAYSL--VAGDEGKFVLES-SSGNLKLKDTLDREQKDKYRVQVRASDGV-QSADVVLTI 119 (122)
Q Consensus 60 D~~~~i~y~l--~~~~~~~f~i~~-~~G~i~~~~~Ld~e~~~~~~l~v~a~D~g-~~~~~~v~I 119 (122)
| ++.++|.- .+++.. ..+.. .+..+.... .....|.|.+.++|+. .....+++|
T Consensus 34 D-g~~lsY~W~~~~Gp~~-~~l~~~~~~~~~~t~----~~~G~y~f~LTVtD~~G~s~s~~v~V 91 (102)
T 2yrl_A 34 D-QKIISYLWEKTQGPDG-VQLENANSSVATVTG----LQVGTYVFTLTVKDERNLQSQSSVNV 91 (102)
T ss_dssp S-SCBCCCCEEEEESCTT-CEEESTTSSEEEEES----CCSSEEEEEEEEEBTTCCEEEEEEEE
T ss_pred C-CCeEEEEEEECCCCce-eEEccCCCccEEEEC----CCCeEEEEEEEEEeCCCCEEEeEEEE
Confidence 5 56666654 444322 34432 222333332 2467999999999954 333333333
No 55
>1x50_A Galectin-4; GAL-BIND lectin, sugar binding, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=59.33 E-value=32 Score=21.97 Aligned_cols=79 Identities=11% Similarity=0.171 Sum_probs=49.1
Q ss_pred CCccc-CCceEEEEeCCCCCCcEEEEEEEECCCCCCcEEEEEEcCC--CCcEEEECC--ccEEEEcc-------------
Q psy6837 29 PPSFA-DFHTEYTISEDVPVGTLVAKVKAIDPDLPGTIAYSLVAGD--EGKFVLESS--SGNLKLKD------------- 90 (122)
Q Consensus 29 ~P~f~-~~~~~~~v~E~~~~g~~v~~~~a~D~D~~~~i~y~l~~~~--~~~f~i~~~--~G~i~~~~------------- 90 (122)
+|.+. .-+|...++....+|..+.-.-...++ ..++.-.|..+. +-.|.++++ .+.|..+.
T Consensus 20 ~p~~~P~vPf~~~ip~gL~~G~~i~I~G~v~~~-~~rF~INl~~g~~~dIalHfnpRf~~~~IV~Ns~~~g~Wg~EEr~~ 98 (164)
T 1x50_A 20 PPTFNPPVPYFGRLQGGLTARRTIIIKGYVPPT-GKSFAINFKVGSSGDIALHINPRMGNGTVVRNSLLNGSWGSEEKKI 98 (164)
T ss_dssp SCEESCCSSEEEECSSCSCTTEEEEEEEECCTT-CCCEEEEEECSSSCCCSEEEECCTTTCCCEEECEETTEECCCEECC
T ss_pred CCccCCCCCEEeeCCCCCccCCEEEEEEEECCC-CCEEEEEEecCCCCCEEEEEEEEcCCCEEEEEcccCCEeccceeeC
Confidence 35443 347999999999999887543333333 556666677664 456888774 33333221
Q ss_pred c-CCccCCCEEEEEEEEEe
Q psy6837 91 T-LDREQKDKYRVQVRASD 108 (122)
Q Consensus 91 ~-Ld~e~~~~~~l~v~a~D 108 (122)
. +-+.....|.|.|.+..
T Consensus 99 ~~~PF~~G~~F~l~I~~~~ 117 (164)
T 1x50_A 99 THNPFGPGQFFDLSIRCGL 117 (164)
T ss_dssp SCCCCCTTSEEEEEEEECS
T ss_pred CCCcccCCCeEEEEEEEcC
Confidence 1 34555677888888765
No 56
>3us9_A Sodium/calcium exchanger 1; beta-sandwich, calcium binding protein, intracellular, metal protein; 2.68A {Canis lupus familiaris} PDB: 2klt_A
Probab=47.45 E-value=71 Score=22.46 Aligned_cols=70 Identities=20% Similarity=0.316 Sum_probs=41.0
Q ss_pred eeEEEEEEEecCCCCCcccCCceEEEEeCCCCCCcEEEEEEEECCCC-CCcEEEEEEcCCC----CcEEEECCccEEEEc
Q psy6837 15 IGCVQLRILDRNDSPPSFADFHTEYTISEDVPVGTLVAKVKAIDPDL-PGTIAYSLVAGDE----GKFVLESSSGNLKLK 89 (122)
Q Consensus 15 ~~~v~i~V~dvNdn~P~f~~~~~~~~v~E~~~~g~~v~~~~a~D~D~-~~~i~y~l~~~~~----~~f~i~~~~G~i~~~ 89 (122)
+...+|+|.| ||++|.|.-..-.+.|.|+. |.....+.-.-.-. .-.+.|....+.. .-|. +.+|.|...
T Consensus 127 ~~~atVtI~D-dD~agv~sf~~~~~~V~E~~--G~~~v~V~Rs~~~~g~VtV~y~T~~GTA~~g~~DY~--~~sgtLtF~ 201 (295)
T 3us9_A 127 PSTATVTIFD-DDHAGIFTFEEPVTHVSESI--GIMEVKVLRTSGARGNVIVPYKTIEGTARGGGEDFE--DTCGELEFQ 201 (295)
T ss_dssp CCEEEEEEEC-CCCCCEEEESCSEEEEESCS--SEEEEEEEEESCCCSCEEEEEEEECCSSCTTTTSEE--CCEEEEEEC
T ss_pred CceeEEEEcc-cccccccccCCCeEEEecCC--CeEEEEEEEEcCCCccEEEEEEecCCCccCCccccc--ccceEEEec
Confidence 3467788786 47788765444477888984 66655555443321 3456787766531 2353 346655543
No 57
>1e09_A PRU AV 1; allergen, major cherry allergen, pathogenesis-related protein, heteronuclear structure; NMR {Prunus avium} SCOP: d.129.3.1 PDB: 1h2o_A 2lpx_A
Probab=46.24 E-value=52 Score=20.54 Aligned_cols=36 Identities=28% Similarity=0.493 Sum_probs=24.5
Q ss_pred EEEEeCCCCCCcEEEEEEEECCCCCCcEEEEEEcCCC
Q psy6837 38 EYTISEDVPVGTLVAKVKAIDPDLPGTIAYSLVAGDE 74 (122)
Q Consensus 38 ~~~v~E~~~~g~~v~~~~a~D~D~~~~i~y~l~~~~~ 74 (122)
.+.+.+..+.+...-++.+.|.+ +..++|++..++.
T Consensus 55 ~~~~~~G~~~~~~kErl~~~D~~-~~~~~y~iieG~~ 90 (159)
T 1e09_A 55 KITFGEGSQYGYVKHKIDSIDKE-NYSYSYTLIEGDA 90 (159)
T ss_dssp EEEECCSSSCEEEEEEEEEEETT-TTEEEEEECCCTT
T ss_pred EEEecCCCCceEEEEEEEEEcCC-CCEEEEEEEeccc
Confidence 44444443334556678888877 8889999997753
No 58
>2yro_A Galectin-8; GAL-BIND lectin, sugar binding, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=44.86 E-value=56 Score=20.54 Aligned_cols=73 Identities=8% Similarity=0.069 Sum_probs=45.4
Q ss_pred CceEEEEeCCCCCCcEEEEEEEECCCCCCcEEEEEEcCC--CCcEEEECC--ccEEEEccc-------------C-CccC
Q psy6837 35 FHTEYTISEDVPVGTLVAKVKAIDPDLPGTIAYSLVAGD--EGKFVLESS--SGNLKLKDT-------------L-DREQ 96 (122)
Q Consensus 35 ~~~~~~v~E~~~~g~~v~~~~a~D~D~~~~i~y~l~~~~--~~~f~i~~~--~G~i~~~~~-------------L-d~e~ 96 (122)
-+|...++....+|..+.-.-...++ ..++.-.|..+. +-.|.++++ .+.|..+.. . .+..
T Consensus 17 vPf~~~ip~gl~~G~~i~I~G~v~~~-~~rF~Inl~~g~~~dialHfnpRf~~~~IV~Ns~~~g~Wg~EEr~~~~fPF~~ 95 (155)
T 2yro_A 17 LPFAARLNTPMGPGRTVVVKGEVNAN-AKSFNVDLLAGKSKDIALHLNPRLNIKAFVRNSFLQESWGEEERNITSFPFSP 95 (155)
T ss_dssp SSEEEECSSCCCTTCEEEEEEEECTT-CCCEEEEEEETTTTEEEEEEECCSSSCCCEEEEECSSCBCCCCCCCSCCCCCT
T ss_pred cCEeeecCCCCccCCEEEEEEEECCC-CCEEEEEEecCCCCCEEEEEEEEcCCCEEEEEcccCCEeccceeeCCCccccC
Confidence 36899999999999988644444444 445666666664 345777764 334433211 1 3344
Q ss_pred CCEEEEEEEEEe
Q psy6837 97 KDKYRVQVRASD 108 (122)
Q Consensus 97 ~~~~~l~v~a~D 108 (122)
...|.|.|.+.+
T Consensus 96 G~~F~l~I~~~~ 107 (155)
T 2yro_A 96 GMYFEMIIYCDV 107 (155)
T ss_dssp TSEEEEEEEECS
T ss_pred CCeEEEEEEEcC
Confidence 567888887765
No 59
>3knb_B Obscurin-like protein 1; IG-like, titin, OBSL1, ATP-binding, calmodulin-BIN cardiomyopathy, disease mutation, immunoglobulin domain; 1.40A {Homo sapiens} PDB: 2wp3_O* 2wwm_C 2wwk_O
Probab=44.31 E-value=43 Score=19.04 Aligned_cols=72 Identities=17% Similarity=0.307 Sum_probs=35.8
Q ss_pred CCcccCCceEEEEeCCCCCCcEEEEEEEE-CCCCCCcEEEEEEcC---CCCcEEEECCcc--EEEEcccCCccCCCEEEE
Q psy6837 29 PPSFADFHTEYTISEDVPVGTLVAKVKAI-DPDLPGTIAYSLVAG---DEGKFVLESSSG--NLKLKDTLDREQKDKYRV 102 (122)
Q Consensus 29 ~P~f~~~~~~~~v~E~~~~g~~v~~~~a~-D~D~~~~i~y~l~~~---~~~~f~i~~~~G--~i~~~~~Ld~e~~~~~~l 102 (122)
||.|......+.+.|+.. ..+...+. ++ .-.++|...+. ....+.+....+ .|.+ .....+....|+.
T Consensus 13 pP~f~~~p~~~~v~~G~~---~~l~C~~~G~P--~p~v~W~k~g~~l~~~~~~~~~~~~~~~~L~I-~~v~~~D~G~Y~C 86 (107)
T 3knb_B 13 PPCFLRFPRPVRVVSGAE---AELKCVVLGEP--PPVVVWEKGGQQLAASERLSFPADGAEHGLLL-TAALPTDAGVYVC 86 (107)
T ss_dssp EEEEEECCCCEEEETTSC---EEEEEEEEEES--CCEEEEEETTEECCCCSSEECCEETTEEEEEE-SSCCGGGCEEEEE
T ss_pred CCEEEeCCCcEEEeCCCc---EEEEEEEEEec--CCEEEEEECcccccceeeEEEeecCceEEEEE-ecCChhhCEEEEE
Confidence 688876666677887653 34444443 22 23455543211 234566543323 3443 3344555556654
Q ss_pred EEEEEe
Q psy6837 103 QVRASD 108 (122)
Q Consensus 103 ~v~a~D 108 (122)
.|.+
T Consensus 87 --~a~N 90 (107)
T 3knb_B 87 --RARN 90 (107)
T ss_dssp --EEEE
T ss_pred --EEEE
Confidence 4455
No 60
>3knb_A Titin; IG-like, titin, OBSL1, ATP-binding, calmodulin-BIN cardiomyopathy, disease mutation, immunoglobulin domain; 1.40A {Homo sapiens} PDB: 3q5o_A 2wp3_T* 2wwk_T 2wwm_D 2y9r_T*
Probab=41.37 E-value=46 Score=18.55 Aligned_cols=85 Identities=19% Similarity=0.355 Sum_probs=42.8
Q ss_pred CCcccCCceEEEEeCCCCCCcEEEEEEEE-CCCCCCcEEEEEEc-----CCCCcEEEECCccE--EEEcccCCccCCCEE
Q psy6837 29 PPSFADFHTEYTISEDVPVGTLVAKVKAI-DPDLPGTIAYSLVA-----GDEGKFVLESSSGN--LKLKDTLDREQKDKY 100 (122)
Q Consensus 29 ~P~f~~~~~~~~v~E~~~~g~~v~~~~a~-D~D~~~~i~y~l~~-----~~~~~f~i~~~~G~--i~~~~~Ld~e~~~~~ 100 (122)
||.|...+-.+.+.|+.. ..+...+. ++ .-.+++...+ .....|.+....+. |.+ .....+....|
T Consensus 5 PP~i~~~p~~~~v~~G~~---~~l~C~~~g~P--~p~v~W~k~g~~i~~~~~~~~~~~~~~~~~~L~I-~~~~~~D~G~Y 78 (100)
T 3knb_A 5 PPKIEALPSDISIDEGKV---LTVACAFTGEP--TPEVTWSCGGRKIHSQEQGRFHIENTDDLTTLII-MDVQKQDGGLY 78 (100)
T ss_dssp EEEECCCCSEEEEETTSE---EEEEEEEEEES--CCEEEEEETTEECCTTGGGTEEEEECSSEEEEEE-SSCCGGGCEEE
T ss_pred CCEEEeCCCcEEEeCCCe---EEEEEEEEEec--CCEEEEEECceEeeeeccceeeeecccceEEEEE-cCCCccCCEEE
Confidence 688877777788887653 33444443 22 2345554322 12235777654443 333 34455555666
Q ss_pred EEEEEEEeC-CC-CceeEEEEEc
Q psy6837 101 RVQVRASDG-VQ-SADVVLTILN 121 (122)
Q Consensus 101 ~l~v~a~D~-g~-~~~~~v~I~d 121 (122)
+.. |++. |. ...+.++|+.
T Consensus 79 ~C~--a~N~~G~~~~~~~l~V~~ 99 (100)
T 3knb_A 79 TLS--LGNEFGSDSATVNIHIRS 99 (100)
T ss_dssp EEE--EEETTEEEEEEEEEEEEC
T ss_pred EEE--EEECCCEEEEEEEEEEEE
Confidence 654 4552 22 2223666654
No 61
>1row_A SSP-19, MSP-domain protein like family member; beta barrel, structural genomics, PSI, protein structure initiative; 2.00A {Caenorhabditis elegans} SCOP: b.1.11.2
Probab=40.63 E-value=42 Score=19.89 Aligned_cols=25 Identities=8% Similarity=0.322 Sum_probs=20.8
Q ss_pred CCcEEEEEEcCCCCcEEEECCccEE
Q psy6837 62 PGTIAYSLVAGDEGKFVLESSSGNL 86 (122)
Q Consensus 62 ~~~i~y~l~~~~~~~f~i~~~~G~i 86 (122)
..++.|.+...++..|.+.|..|.|
T Consensus 28 ~~~vaFKVKtT~p~~y~VrP~~G~I 52 (109)
T 1row_A 28 AEKIVFKIKSSNNNEYRIAPVFGFV 52 (109)
T ss_dssp SSCEEEEEEESCSSSEEEECSEEEE
T ss_pred CCeEEEEEEeCCCCceEEcCCceEE
Confidence 5678999988878889999998854
No 62
>2wql_A Major allergen DAU C 1; pathogenesis-related protein, plant defense; HET: P4C; 2.70A {Daucus carota} PDB: 2bk0_A
Probab=39.97 E-value=68 Score=20.12 Aligned_cols=38 Identities=18% Similarity=0.357 Sum_probs=28.9
Q ss_pred CceEEEEeCCCCCCcEEEEEEEECCCCCCcEEEEEEcCC
Q psy6837 35 FHTEYTISEDVPVGTLVAKVKAIDPDLPGTIAYSLVAGD 73 (122)
Q Consensus 35 ~~~~~~v~E~~~~g~~v~~~~a~D~D~~~~i~y~l~~~~ 73 (122)
+...+...++.+.+...-++.+.|.+ +-.++|++..|+
T Consensus 52 sir~~t~~~g~~~~~~kErle~iD~~-~~~~~y~iieGd 89 (154)
T 2wql_A 52 TVRIITLPEGSPITTMTVRTDAVNKE-ALSYDSTVIDGD 89 (154)
T ss_dssp CEEEEECCTTCSCCEEEEEEEEEETT-TTEEEEEEEESG
T ss_pred eEEEEEEcCCCCceEEEEEEEEEehh-hCEEEEEEEecc
Confidence 34456667777666677789999988 888999999774
No 63
>3gin_A Sodium/calcium exchanger 1; CBD1, CBD2, NCX, calcium binding domain 1, antiport, calcium transport, calmodulin-binding, cell membrane; 2.40A {Canis lupus familiaris} PDB: 2dpk_A* 2fws_A
Probab=39.96 E-value=70 Score=20.28 Aligned_cols=53 Identities=13% Similarity=0.146 Sum_probs=26.4
Q ss_pred EEEEEEEecCCCCCcccCCceEEEEeCCCCCCcEEEEEEEECCCC--CCcEEEEEEcC
Q psy6837 17 CVQLRILDRNDSPPSFADFHTEYTISEDVPVGTLVAKVKAIDPDL--PGTIAYSLVAG 72 (122)
Q Consensus 17 ~v~i~V~dvNdn~P~f~~~~~~~~v~E~~~~g~~v~~~~a~D~D~--~~~i~y~l~~~ 72 (122)
.+.+.|.|-+ ..+.|.-..-...|.|+. |+.-.++.-...+. ...+.|+...+
T Consensus 11 ~~~~~i~ddd-~~g~i~F~~~~y~V~E~~--G~v~vtV~R~~G~~~~~v~V~y~T~dG 65 (160)
T 3gin_A 11 ALEVLFQGPG-PVSKIFFEQGTYQCLENC--GTVALTIIRRGGDLTNTVFVDFRTEDG 65 (160)
T ss_dssp -----------CEEEEEESCSEEEEETTS--SEEEEEEEEESSCTTSCEEEEEEEEES
T ss_pred eEEEEEecCC-CccEEEEeCCEEEEEcCc--EEEEEEEEEccCCCCcEEEEEEEEECC
Confidence 4566666533 356655555577888985 66655655443332 44578987766
No 64
>1k85_A Chitinase A1; fibronectin type III domain, chitin binding domain, carbohydrase, horizontal gene transfer, hydrolase; NMR {Bacillus circulans} SCOP: b.1.2.1
Probab=38.63 E-value=47 Score=17.85 Aligned_cols=14 Identities=29% Similarity=0.510 Sum_probs=11.9
Q ss_pred cCCCEEEEEEEEEe
Q psy6837 95 EQKDKYRVQVRASD 108 (122)
Q Consensus 95 e~~~~~~l~v~a~D 108 (122)
+....|.+.|.|.|
T Consensus 59 ~~~t~Y~~~V~A~n 72 (88)
T 1k85_A 59 AADTSYTFTVKAKD 72 (88)
T ss_dssp CSSCEEEEEEEEEE
T ss_pred CCCCEEEEEEEEEe
Confidence 35678999999999
No 65
>3jrs_A PYL1, putative uncharacterized protein AT5G46790; plant hormone receptor, abscisic acid, hormone recepto; HET: A8S; 2.05A {Arabidopsis thaliana}
Probab=37.63 E-value=83 Score=20.98 Aligned_cols=34 Identities=18% Similarity=0.418 Sum_probs=23.3
Q ss_pred EEEeCCCCCCcEEEEEEEECCCCCCcEEEEEEcCC
Q psy6837 39 YTISEDVPVGTLVAKVKAIDPDLPGTIAYSLVAGD 73 (122)
Q Consensus 39 ~~v~E~~~~g~~v~~~~a~D~D~~~~i~y~l~~~~ 73 (122)
+.+.++.|.+...-++.+.|.+ +..++|+|..++
T Consensus 105 lt~~~G~p~~~vkErL~~lDde-~~~~sYsIieG~ 138 (208)
T 3jrs_A 105 VNVISGLPANTSRERLDLLDDD-RRVTGFSITGGE 138 (208)
T ss_dssp EEECTTSSCCEEEEEEEEEETT-TTEEEEEEEESS
T ss_pred EEecCCCccceEEEEEEEEecc-CCEEEEEEeeCC
Confidence 3444444445555678888887 788999999764
No 66
>2qvk_A CBD2, sodium/calcium exchanger 1; calcium binding domain, metal binding protein; 1.45A {Canis lupus familiaris} PDB: 2qvm_A 2fwu_A 2kls_A
Probab=36.45 E-value=91 Score=20.57 Aligned_cols=45 Identities=18% Similarity=0.191 Sum_probs=27.7
Q ss_pred CCCCCcccCCceEEEEeCCCCCCcEEEEEEEECCCC-CCcEEEEEEcC
Q psy6837 26 NDSPPSFADFHTEYTISEDVPVGTLVAKVKAIDPDL-PGTIAYSLVAG 72 (122)
Q Consensus 26 Ndn~P~f~~~~~~~~v~E~~~~g~~v~~~~a~D~D~-~~~i~y~l~~~ 72 (122)
+|++..|.-..-.+.|.|+. |....++.-...-. .-.+.|.-..+
T Consensus 2 DD~~Gv~sF~~~~y~V~E~~--G~v~vtV~R~gg~~g~VsV~y~T~dG 47 (192)
T 2qvk_A 2 PGHAGIFTFEEPVTHVSESI--GIMEVKVLRTSGARGNVIVPYKTIEG 47 (192)
T ss_dssp --CCCEEEESCSEEEEETTC--CEEEEEEEEESCCCSCEEEEEEEEES
T ss_pred CCCceEEEEcCCeEEEEcCc--eEEEEEEEEeCCCCceEEEEEEeeCC
Confidence 46677776666678899986 66666655543321 44577887766
No 67
>1m1s_A WR4; structural genomics, major sperm protein, bioinformatics, PSI, protein structure initiative; 1.80A {Caenorhabditis elegans} SCOP: b.1.11.2
Probab=35.96 E-value=52 Score=19.86 Aligned_cols=25 Identities=8% Similarity=0.302 Sum_probs=20.5
Q ss_pred CCcEEEEEEcCCCCcEEEECCccEE
Q psy6837 62 PGTIAYSLVAGDEGKFVLESSSGNL 86 (122)
Q Consensus 62 ~~~i~y~l~~~~~~~f~i~~~~G~i 86 (122)
..++.|.+...++..|.+.|..|.|
T Consensus 36 ~~~vAFKVKtT~p~~YrVrP~~G~I 60 (116)
T 1m1s_A 36 DSRLAFKVKSSNNEHYRVRPVYGFV 60 (116)
T ss_dssp SSEEEEEEEESCTTTEEEECSEEEE
T ss_pred CCeEEEEEEecCCCceEEcCCceEE
Confidence 5678899987778889999988854
No 68
>4a8u_A Major pollen allergen BET V 1-J; PR-10 protein; 1.16A {Betula pendula} PDB: 4a8v_A* 4a87_A* 4a81_A* 4a80_A* 4a83_A* 4a86_A* 4a85_A* 4a88_A 4a8g_A* 1b6f_A 1btv_A 1bv1_A 1fsk_A 4a84_A* 1llt_A 1fm4_A* 3k78_A 1qmr_A
Probab=35.63 E-value=60 Score=20.40 Aligned_cols=35 Identities=20% Similarity=0.392 Sum_probs=25.3
Q ss_pred EEEEeCCCCCCcEEEEEEEECCCCCCcEEEEEEcCC
Q psy6837 38 EYTISEDVPVGTLVAKVKAIDPDLPGTIAYSLVAGD 73 (122)
Q Consensus 38 ~~~v~E~~~~g~~v~~~~a~D~D~~~~i~y~l~~~~ 73 (122)
.+...+..+.+...-++.+.|.+ +..++|++..++
T Consensus 55 ~~~~~~g~~~~~~kErl~~iD~~-~~~~~y~iiegd 89 (159)
T 4a8u_A 55 KISFPEGFPFKYVKDRVDEVDHT-NFKYSYSVIEGG 89 (159)
T ss_dssp EEECCTTSSCSEEEEEEEEEETT-TTEEEEEEEEET
T ss_pred EEEEecCCCccEEEEEEEEEccc-cCEEEEEEeeCC
Confidence 44455555555666788888887 888999998664
No 69
>1b4r_A Protein (PKD1_human); PKD domain 1 from human polycystein-1, polycystin (precursor), membrane protein; NMR {Homo sapiens} SCOP: b.1.3.1
Probab=35.55 E-value=50 Score=18.47 Aligned_cols=22 Identities=23% Similarity=0.166 Sum_probs=16.8
Q ss_pred ccCCCEEEEEEEEEeCCCCcee
Q psy6837 94 REQKDKYRVQVRASDGVQSADV 115 (122)
Q Consensus 94 ~e~~~~~~l~v~a~D~g~~~~~ 115 (122)
|.....|.+++.+++++....+
T Consensus 51 Y~~~G~YtV~Ltv~~g~~~~~a 72 (80)
T 1b4r_A 51 YVLPGRYHVTAVLALGAGSALL 72 (80)
T ss_dssp ECSSEEEEEEEEEECSSCEEEE
T ss_pred CCCCcEEEEEEEEEeCCceEEE
Confidence 5667899999999987655554
No 70
>2vjg_A Major allergen DAU C 1; major carrot allergen, pathogenesis-related protein, plant defense; HET: P4C PG4 PGE; 2.70A {Daucus carota} PDB: 2wql_A* 2bk0_A
Probab=33.18 E-value=80 Score=19.72 Aligned_cols=34 Identities=21% Similarity=0.468 Sum_probs=23.1
Q ss_pred EEEeCCCCCCcEEEEEEEECCCCCCcEEEEEEcCC
Q psy6837 39 YTISEDVPVGTLVAKVKAIDPDLPGTIAYSLVAGD 73 (122)
Q Consensus 39 ~~v~E~~~~g~~v~~~~a~D~D~~~~i~y~l~~~~ 73 (122)
+...+..+.....=++.+.|.+ +..++|++..++
T Consensus 56 ~~~~~g~~~~~~kErl~~iD~~-~~~~~y~iiegd 89 (154)
T 2vjg_A 56 ITLPEGSPITTMTVRTDAVNKE-ALSYDSTVIDGD 89 (154)
T ss_dssp EECCTTCSCCEEEEEEEEEETT-TTEEEEEEEESG
T ss_pred EEecCCCCceEEEEEEEEEecc-CCEEEEEEEecC
Confidence 4444444444555678888887 888999988764
No 71
>3oqu_A Abscisic acid receptor PYL9; RCAR1, hormone receptor; HET: A8S; 2.68A {Arabidopsis thaliana}
Probab=32.33 E-value=90 Score=20.77 Aligned_cols=33 Identities=12% Similarity=0.394 Sum_probs=23.2
Q ss_pred EEEeCCCCCCcEEEEEEEECCCCCCcEEEEEEcC
Q psy6837 39 YTISEDVPVGTLVAKVKAIDPDLPGTIAYSLVAG 72 (122)
Q Consensus 39 ~~v~E~~~~g~~v~~~~a~D~D~~~~i~y~l~~~ 72 (122)
+.+.+..|.+...-++.+.|.+ +-.++|++..+
T Consensus 101 vt~~~G~p~~~vkErL~~lDde-~~~~sYsIieG 133 (205)
T 3oqu_A 101 VNVKSGLPATTSTERLELLDDE-EHILGIKIIGG 133 (205)
T ss_dssp EEECTTSSCSEEEEEEEEEETT-TTEEEEEEEEE
T ss_pred EEEcCCCccceEEEEEEEEECC-CCEEEEEEEec
Confidence 4444554555666678888877 78889999876
No 72
>3oji_A Abscisic acid receptor PYL3; crystal, PP2C, pyrabactin, HOR receptor; HET: PYV; 1.84A {Arabidopsis thaliana} PDB: 4ds8_A* 3klx_A* 4dsb_A* 4dsc_A*
Probab=31.99 E-value=1.1e+02 Score=20.18 Aligned_cols=34 Identities=15% Similarity=0.464 Sum_probs=22.3
Q ss_pred EEEeCCCCCCcEEEEEEEECCCCCCcEEEEEEcCC
Q psy6837 39 YTISEDVPVGTLVAKVKAIDPDLPGTIAYSLVAGD 73 (122)
Q Consensus 39 ~~v~E~~~~g~~v~~~~a~D~D~~~~i~y~l~~~~ 73 (122)
+.+....|.++..=++.+.|.+ +-.++|+|..++
T Consensus 85 ltl~~G~P~~~i~ErL~~lDde-~~~~sY~Iieg~ 118 (189)
T 3oji_A 85 VSVVSGLPASTSVEILEVLDEE-KRILSFRVLGGE 118 (189)
T ss_dssp EEECSSSSBSEEEEEEEEEETT-TTEEEEEEEECS
T ss_pred EEecCCCcCceEEEEEEEEecc-CCEEEEEEEecC
Confidence 3333344444555677888877 888999998763
No 73
>1jh4_B PAIP1, polyadenylate-binding protein-interacting protein-1; all-helical domain, protein-peptide complex, RNA binding protein; NMR {Homo sapiens} PDB: 3ntw_B
Probab=30.87 E-value=20 Score=15.68 Aligned_cols=14 Identities=14% Similarity=0.074 Sum_probs=10.8
Q ss_pred cCCCCCcccCCceE
Q psy6837 25 RNDSPPSFADFHTE 38 (122)
Q Consensus 25 vNdn~P~f~~~~~~ 38 (122)
..-++|+|.++.|.
T Consensus 6 LS~~ApeF~Psgys 19 (26)
T 1jh4_B 6 LSVNAPEFYPSGYS 19 (26)
T ss_dssp SSCCCSCCCCTTCC
T ss_pred cCcCCceeccCccc
Confidence 34579999988876
No 74
>3kl1_A PYL2, putative uncharacterized protein AT2G26040; abscisic acid receptor, crystal, high resolution, PP2C, HORM receptor; 1.55A {Arabidopsis thaliana} PDB: 3kdi_A* 3kdh_A 3nr4_A* 3ns2_A* 3nj0_A* 3nj1_A* 3nmh_A* 3kaz_A 3kb0_A* 3kb3_A* 3ujl_A* 3nmp_A* 3nmt_A* 3nmv_A*
Probab=30.73 E-value=81 Score=20.60 Aligned_cols=34 Identities=21% Similarity=0.493 Sum_probs=21.9
Q ss_pred EEEeCCCCCCcEEEEEEEECCCCCCcEEEEEEcCC
Q psy6837 39 YTISEDVPVGTLVAKVKAIDPDLPGTIAYSLVAGD 73 (122)
Q Consensus 39 ~~v~E~~~~g~~v~~~~a~D~D~~~~i~y~l~~~~ 73 (122)
+.+.+..+.+...-++.+.|.+ +..++|++..++
T Consensus 85 ~t~~~G~p~~~vkErL~~iD~~-~~~~sY~iieG~ 118 (190)
T 3kl1_A 85 VTVISGLPASTSTERLEFVDDD-HRVLSFRVVGGE 118 (190)
T ss_dssp EEECSSSSCEEEEEEEEEEETT-TTEEEEEEEEES
T ss_pred EEecCCCccceEEEEEEEEecc-CCEEEEEEEecC
Confidence 3334443434455567777877 788999998763
No 75
>3rt2_A Abscisic acid receptor PYL10; ABA-independent PP2C inhibitor, PP2CS, hydrolase inhibitor; 1.50A {Arabidopsis thaliana} PDB: 3r6p_A* 3qtj_A* 3uqh_A 3rt0_C
Probab=29.85 E-value=1e+02 Score=19.94 Aligned_cols=33 Identities=12% Similarity=0.317 Sum_probs=22.2
Q ss_pred EEEeCCCCCCcEEEEEEEECCCCCCcEEEEEEcC
Q psy6837 39 YTISEDVPVGTLVAKVKAIDPDLPGTIAYSLVAG 72 (122)
Q Consensus 39 ~~v~E~~~~g~~v~~~~a~D~D~~~~i~y~l~~~ 72 (122)
+.+.+..|.+...-++.+.|.+ +..++|++..+
T Consensus 77 lt~~~G~p~~~vkErL~~~D~~-~~~~sY~Iieg 109 (183)
T 3rt2_A 77 VDLKSGLPATKSTEVLEILDDN-EHILGIRIVGG 109 (183)
T ss_dssp EEECCSSTTCEEEEEEEEEETT-TTEEEEEEEEE
T ss_pred EEeCCCCccceEEEEEEEEECC-CCEEEEEEecC
Confidence 4444444445566677888877 77789998876
No 76
>1tw0_A Pathogenesis-related class 10 protein SPE-16; seven antiparallel beta-sheet, plant protein; 2.20A {Pachyrhizus erosus} SCOP: d.129.3.1 PDB: 1txc_A*
Probab=29.27 E-value=73 Score=19.80 Aligned_cols=23 Identities=39% Similarity=0.533 Sum_probs=16.6
Q ss_pred EEEEEEEECCCCCCcEEEEEEcCC
Q psy6837 50 LVAKVKAIDPDLPGTIAYSLVAGD 73 (122)
Q Consensus 50 ~v~~~~a~D~D~~~~i~y~l~~~~ 73 (122)
..-++.+.|.+ +..++|++..++
T Consensus 66 ~kErl~~~D~~-~~~~~y~iieGd 88 (157)
T 1tw0_A 66 VLQKVDAIDEA-NLGYDYSIVGGT 88 (157)
T ss_dssp EEEEEEEEETT-TTEEEEEEEECT
T ss_pred EEEEEEEEecc-CCEEEEEEEecC
Confidence 44467777766 888889988775
No 77
>3ie5_A Phenolic oxidative coupling protein HYP-1; hypericin, ST JOHN'S WORT, depression, allergy, PR-10 protein, cytokinin, plant hormones; HET: PGE PG4 PE8 1PE; 1.69A {Hypericum perforatum} SCOP: d.129.3.0
Probab=29.15 E-value=72 Score=20.27 Aligned_cols=36 Identities=28% Similarity=0.410 Sum_probs=25.6
Q ss_pred eEEEEeCCCCCCcEEEEEEEECCCCCCcEEEEEEcCC
Q psy6837 37 TEYTISEDVPVGTLVAKVKAIDPDLPGTIAYSLVAGD 73 (122)
Q Consensus 37 ~~~~v~E~~~~g~~v~~~~a~D~D~~~~i~y~l~~~~ 73 (122)
-.+...+..+.+...-++.+.|.+ +..++|++..++
T Consensus 61 r~~~~~~g~~~~~~kErl~~iD~~-~~~~~Y~iieG~ 96 (165)
T 3ie5_A 61 TKITFVDGHPLTYMLHKFDEIDAA-NFYCKYTLFEGD 96 (165)
T ss_dssp EEEEECTTSSCCEEEEEEEEEEGG-GTEEEEEEEEEG
T ss_pred EEEEecCCCCCceEEEEEEEEchh-cCEEEEEEecCC
Confidence 345555665555666778888887 888999998664
No 78
>2zhn_A Galectin-9; beta sandwich, carbohydrate binding protein, sugar protein; HET: NAG GAL; 1.30A {Homo sapiens} PDB: 2eak_A* 2eal_A* 2zhk_A* 2zhm_A* 2zhl_A* 2yy1_A* 3lsd_A 3lse_A*
Probab=28.60 E-value=1.1e+02 Score=18.94 Aligned_cols=74 Identities=9% Similarity=0.089 Sum_probs=45.9
Q ss_pred CCceEEEEeCCCCCCcEEEEEEEE-CCCCCCcEEEEEEcCC---CCcEEEECC---ccEEEEcc-------------cCC
Q psy6837 34 DFHTEYTISEDVPVGTLVAKVKAI-DPDLPGTIAYSLVAGD---EGKFVLESS---SGNLKLKD-------------TLD 93 (122)
Q Consensus 34 ~~~~~~~v~E~~~~g~~v~~~~a~-D~D~~~~i~y~l~~~~---~~~f~i~~~---~G~i~~~~-------------~Ld 93 (122)
.-+|...++....+|..+.-.-.. +++ ..++.-.|..+. +-.|.++++ .+.|..+. .+-
T Consensus 14 ~vP~~~~i~~gl~~G~~i~I~G~~~~~~-~~rF~Inl~~g~~~~dialHfnpRf~~~~~IV~Ns~~~g~Wg~EEr~~~~P 92 (148)
T 2zhn_A 14 AVPFSGTIQGGLQDGLQITVNGTVLSSS-GTRFAVNFQTGFSGNDIAFHFNPRFEDGGYVVCNTRQNGSWGPEERKTHMP 92 (148)
T ss_dssp CSSEEEECTTCCCTTCEEEEEEEECSSS-CSBEEEEEESSSSSSCEEEEEEEECSTTCEEEEEEEETTEECCCEEESCCC
T ss_pred CCCEEEECCCCCccCCEEEEEEEECCCC-CCEEEEEEeeCCCCCCEEEEEEEEECCCCEEEEECccCCEeccceEeCCCc
Confidence 356899999999999887533323 333 456666676553 334666653 45554432 234
Q ss_pred ccCCCEEEEEEEEEe
Q psy6837 94 REQKDKYRVQVRASD 108 (122)
Q Consensus 94 ~e~~~~~~l~v~a~D 108 (122)
+.....|.+.+.+..
T Consensus 93 F~~G~~F~l~i~~~~ 107 (148)
T 2zhn_A 93 FQKGMPFDLCFLVQS 107 (148)
T ss_dssp CCTTCEEEEEEEECS
T ss_pred ccCCCeEEEEEEEcC
Confidence 445678888888765
No 79
>1msp_A MSP, major sperm protein; cytoskeletal protein, cell motility protein; 2.50A {Ascaris suum} SCOP: b.1.11.2 PDB: 3msp_A 2bvu_A 2msp_A 1grw_A
Probab=28.59 E-value=82 Score=18.97 Aligned_cols=24 Identities=8% Similarity=0.282 Sum_probs=19.9
Q ss_pred CCcEEEEEEcCCCCcEEEECCccE
Q psy6837 62 PGTIAYSLVAGDEGKFVLESSSGN 85 (122)
Q Consensus 62 ~~~i~y~l~~~~~~~f~i~~~~G~ 85 (122)
...+.|.+.......|.+.|..|.
T Consensus 38 ~~~vaFKVKTT~p~~y~VrP~~Gi 61 (126)
T 1msp_A 38 GRRIGWAIKTTNMRRLSVDPPCGV 61 (126)
T ss_dssp SSCEEEEEEESCTTTEEEESCEEE
T ss_pred CCeEEEEEEcCCCCcEEEECCCeE
Confidence 567899998777788999998884
No 80
>2lv4_A Putative outer membrane or exported protein; antivirulence, adhesion, protein binding; NMR {Salmonella enterica subsp}
Probab=26.92 E-value=34 Score=21.23 Aligned_cols=20 Identities=15% Similarity=0.184 Sum_probs=15.4
Q ss_pred CCCceeEEEEEEEecCCCCC
Q psy6837 11 KFGVIGCVQLRILDRNDSPP 30 (122)
Q Consensus 11 ~~g~~~~v~i~V~dvNdn~P 30 (122)
..|..+.+++-|.|+|.||=
T Consensus 61 ~PGESA~it~IvKDid~nPI 80 (146)
T 2lv4_A 61 SPGESATITTIVKDIDGNPV 80 (146)
T ss_dssp CTTCEEEEEEECBBTTSCBC
T ss_pred CCCcceEEEEEEEeCCCCcc
Confidence 34666799999999988643
No 81
>1z9l_A Vesicle-associated membrane protein-associated protein A; VAP-A, cytoplasmic domain, protein binding; HET: MSE; 1.70A {Rattus norvegicus} PDB: 1z9o_A 2rr3_A 3ikk_A
Probab=26.85 E-value=72 Score=19.13 Aligned_cols=33 Identities=12% Similarity=0.370 Sum_probs=23.6
Q ss_pred EEEEEECCCCCCcEEEEEEcCCCCcEEEECCccE
Q psy6837 52 AKVKAIDPDLPGTIAYSLVAGDEGKFVLESSSGN 85 (122)
Q Consensus 52 ~~~~a~D~D~~~~i~y~l~~~~~~~f~i~~~~G~ 85 (122)
..+.-.-.- ...+.|.+...+...|.+.|..|.
T Consensus 31 ~~l~L~N~s-~~~vaFKVKTT~p~~y~VrP~~G~ 63 (128)
T 1z9l_A 31 TNLKLQNPS-DRKVCFKVKTTAPRRYCVRPNSGV 63 (128)
T ss_dssp EEEEEECCS-SSCEEEEEEESCGGGEEEESCEEE
T ss_pred EEEEEECCC-CCeEEEEEECCCCCceEEeCCCcE
Confidence 344444443 567889998777778999998884
No 82
>3k3k_A Abscisic acid receptor PYR1; ABA receptor, plant hormone receptor, A sensor, drought tolerance, plant development; HET: A8S; 1.70A {Arabidopsis thaliana} PDB: 3njo_A* 3qn1_A* 3k90_A* 3zvu_A* 3jrq_B* 3kdj_A* 3nef_A* 3neg_A* 3nmn_A* 3kay_A*
Probab=26.13 E-value=1e+02 Score=20.59 Aligned_cols=34 Identities=15% Similarity=0.441 Sum_probs=22.6
Q ss_pred EEEeCCCCCCcEEEEEEEECCCCCCcEEEEEEcCC
Q psy6837 39 YTISEDVPVGTLVAKVKAIDPDLPGTIAYSLVAGD 73 (122)
Q Consensus 39 ~~v~E~~~~g~~v~~~~a~D~D~~~~i~y~l~~~~ 73 (122)
+.+.+..|.+...-++.+.|.+ +-.++|+|..++
T Consensus 101 lt~~~G~p~~~vkErL~~lDd~-~~~~sYsIieg~ 134 (211)
T 3k3k_A 101 VIVISGLPANTSTERLDILDDE-RRVTGFSIIGGE 134 (211)
T ss_dssp EEESSSSSCEEEEEEEEEEETT-TTEEEEEEEEET
T ss_pred EEecCCCccceEEEEEEEEecc-CCEEEEEEeecC
Confidence 3444444444555667788877 778999998764
No 83
>2qim_A PR10.2B; trans-zeatin, cytokinin, plant hormones, plant protein, PR-1 protein, pathogenesis-related protein, allergen; HET: ZEA; 1.35A {Lupinus luteus} PDB: 3e85_A* 1xdf_A* 2k7h_A
Probab=26.09 E-value=96 Score=19.22 Aligned_cols=24 Identities=33% Similarity=0.441 Sum_probs=16.7
Q ss_pred cEEEEEEEECCCCCCcEEEEEEcCC
Q psy6837 49 TLVAKVKAIDPDLPGTIAYSLVAGD 73 (122)
Q Consensus 49 ~~v~~~~a~D~D~~~~i~y~l~~~~ 73 (122)
...-++.+.|.+ +..++|++..++
T Consensus 66 ~~kErl~~~D~~-~~~~~y~iieG~ 89 (158)
T 2qim_A 66 YVLHKIEAIDEA-NLGYNYSIVGGV 89 (158)
T ss_dssp EEEEEEEEEEGG-GTEEEEEEEEES
T ss_pred eEEEEEEEEecC-CCEEEEEEEecc
Confidence 344466777766 788888888764
No 84
>1icx_A Protein LLR18A, LLPR10.1A; 7-stranded beta sheet, C-terminal helix, allergen; 1.95A {Lupinus luteus} SCOP: d.129.3.1 PDB: 1ifv_A
Probab=25.25 E-value=70 Score=19.81 Aligned_cols=35 Identities=26% Similarity=0.351 Sum_probs=21.7
Q ss_pred EEEEeCCCCCCcEEEEEEEECCCCCCcEEEEEEcCC
Q psy6837 38 EYTISEDVPVGTLVAKVKAIDPDLPGTIAYSLVAGD 73 (122)
Q Consensus 38 ~~~v~E~~~~g~~v~~~~a~D~D~~~~i~y~l~~~~ 73 (122)
.+.+.+..+.....-++.+.|.+ +..++|++..++
T Consensus 54 ~~~~~~G~~~~~~kErl~~~D~~-~~~~~y~iieGd 88 (155)
T 1icx_A 54 KIIAIHDGHTSFVLHKLDAIDEA-NLTYNYSIIGGE 88 (155)
T ss_dssp EEEEESSSSEEEEEEEEEEEEGG-GTEEEEEEEEET
T ss_pred EEEEecCCcceeEEEEEEEEecc-CCEEEEEEEecC
Confidence 34444433333455567777766 788889888764
No 85
>2flh_A Cytokinin-specific binding protein; zeatin, pathogenesis-related proteins, multiple- ligand binding, plant protein; HET: ZEA; 1.20A {Vigna radiata} PDB: 3c0v_A*
Probab=25.17 E-value=1.3e+02 Score=18.66 Aligned_cols=34 Identities=12% Similarity=0.304 Sum_probs=22.1
Q ss_pred EEEEeCC-CCCCcEEEEEEEECCCCCCcEEEEEEcCC
Q psy6837 38 EYTISED-VPVGTLVAKVKAIDPDLPGTIAYSLVAGD 73 (122)
Q Consensus 38 ~~~v~E~-~~~g~~v~~~~a~D~D~~~~i~y~l~~~~ 73 (122)
.+.+.+. .+ +...=++.+.|.+ +..++|++..++
T Consensus 55 ~~~~~~g~~~-~~~kErl~~iD~~-~~~~~y~iieg~ 89 (155)
T 2flh_A 55 IFNFLPEVSP-SYQREEITEFDES-SHEIGLQVIEGG 89 (155)
T ss_dssp EEEECTTSSS-CEEEEEEEEEETT-TTEEEEEEEEEG
T ss_pred EEEeeCCCCC-cEEEEEEEEEeCC-CCEEEEEEEecc
Confidence 3444444 33 5555677778776 888889888663
No 86
>3ima_B Cysteine proteinase inhibitor; cystatin, tarocystatin, cecpi, papain, phytocystatin, allergen, disulfide bond, hydrolase, protease; 2.03A {Colocasia esculenta} SCOP: d.17.1.0
Probab=24.02 E-value=78 Score=17.79 Aligned_cols=23 Identities=9% Similarity=-0.008 Sum_probs=15.9
Q ss_pred CCEEEEEEEEEeCCCCceeEEEE
Q psy6837 97 KDKYRVQVRASDGVQSADVVLTI 119 (122)
Q Consensus 97 ~~~~~l~v~a~D~g~~~~~~v~I 119 (122)
...|.|.|.+.|++......+.|
T Consensus 52 G~nY~l~v~~~~~~~~~~y~a~V 74 (91)
T 3ima_B 52 GIMHHLTVEVIEGGKKKVYEAKV 74 (91)
T ss_dssp SEEEEEEEEEEETTEEEEEEEEE
T ss_pred cEEEEEEEEEecCCceEEEEEEE
Confidence 46788999998877654444444
No 87
>1wic_A Hypothetical protein riken cDNA 6030424E15; beta sandwich fold, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: b.1.11.2
Probab=23.60 E-value=1.1e+02 Score=19.09 Aligned_cols=25 Identities=12% Similarity=0.271 Sum_probs=19.9
Q ss_pred CCcEEEEEEcCCCCcEEEECCccEE
Q psy6837 62 PGTIAYSLVAGDEGKFVLESSSGNL 86 (122)
Q Consensus 62 ~~~i~y~l~~~~~~~f~i~~~~G~i 86 (122)
...+.|.+.......|.+.|..|.|
T Consensus 48 ~~~VaFKVKTT~p~~y~VrP~~GiI 72 (152)
T 1wic_A 48 KNIVAFKVRTTAPEKYRVKPSNSSC 72 (152)
T ss_dssp SSCEEEEEEESCTTTEEEESSEEEE
T ss_pred CCeEEEEEECCCCCceeecCCCcEE
Confidence 4678899887777789999988843
No 88
>2dmk_A Midline 2 isoform 2; midline defect 2, tripartite motif protein 1, midin-2, ring finger protein 60, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=22.84 E-value=83 Score=18.33 Aligned_cols=14 Identities=21% Similarity=0.382 Sum_probs=12.2
Q ss_pred cCCCEEEEEEEEEe
Q psy6837 95 EQKDKYRVQVRASD 108 (122)
Q Consensus 95 e~~~~~~l~v~a~D 108 (122)
+....|.|.|.|.+
T Consensus 88 ~p~t~Y~frV~A~N 101 (127)
T 2dmk_A 88 QSGTRYIFIVKAIN 101 (127)
T ss_dssp CSSCEEEEEEEEEE
T ss_pred CCCCEEEEEEEEEe
Confidence 45779999999999
No 89
>2cri_A Vesicle-associated membrane protein-associated protein A; VAP-A, VAP-33, beta sandwitch fold, structural genomics, NPPSFA; NMR {Mus musculus}
Probab=22.05 E-value=95 Score=19.18 Aligned_cols=24 Identities=8% Similarity=0.311 Sum_probs=19.3
Q ss_pred CCcEEEEEEcCCCCcEEEECCccE
Q psy6837 62 PGTIAYSLVAGDEGKFVLESSSGN 85 (122)
Q Consensus 62 ~~~i~y~l~~~~~~~f~i~~~~G~ 85 (122)
...+.|.+.......|.+.|..|.
T Consensus 44 ~~~VaFKVKTT~p~~y~VrP~~Gi 67 (147)
T 2cri_A 44 DRKVCFKVKTTAPRRYCVRPNSGI 67 (147)
T ss_dssp SSCEEEEEEESCTTSEEEESSEEE
T ss_pred CCcEEEEEECCCCccEEEcCCCcE
Confidence 467889888777778999998883
No 90
>2vq5_A S-norcoclaurine synthase; lyase, S- norcoclaurine biosynthesis, dopamine, hydroxybenzaldehyde; HET: MSE LDP HBA; 2.09A {Thalictrum flavum} PDB: 2vne_A*
Probab=21.80 E-value=1.4e+02 Score=19.74 Aligned_cols=34 Identities=12% Similarity=0.067 Sum_probs=23.4
Q ss_pred EEEeCCCCCCcEEEEEEEECCCCCCcEEEEEEcCC
Q psy6837 39 YTISEDVPVGTLVAKVKAIDPDLPGTIAYSLVAGD 73 (122)
Q Consensus 39 ~~v~E~~~~g~~v~~~~a~D~D~~~~i~y~l~~~~ 73 (122)
+...++.+.+...-++.+.|.+ +-.++|++..++
T Consensus 82 lt~~~G~~~~~vkErle~iDde-~~~~sYsiieGd 115 (201)
T 2vq5_A 82 MTFVPGEFPHEYKEKFILVDNE-HRLKKVQMIEGG 115 (201)
T ss_dssp EECCTTCSSCEEEEEEEEEETT-TTEEEEEEEEEG
T ss_pred EEecCCCcccEEEEEEEEEchh-hCEEEEEEEecC
Confidence 4444444444566678888877 888999998764
No 91
>1x4x_A Fibronectin type-III domain containing protein 3A; FN3, immunoglobulin-like beta- sandwich fold, KIAA0970, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.2.1
Probab=21.42 E-value=1.2e+02 Score=16.82 Aligned_cols=14 Identities=21% Similarity=0.309 Sum_probs=11.9
Q ss_pred cCCCEEEEEEEEEe
Q psy6837 95 EQKDKYRVQVRASD 108 (122)
Q Consensus 95 e~~~~~~l~v~a~D 108 (122)
+....|.|.|.|.+
T Consensus 69 ~p~t~Y~frV~A~n 82 (106)
T 1x4x_A 69 SPATTYYCRVQALS 82 (106)
T ss_dssp CSSCEEEEEEEEEC
T ss_pred CCCCEEEEEEEEEc
Confidence 45678999999998
No 92
>3zxf_A Galectin-7; sugar binding protein; 1.38A {Homo sapiens} SCOP: b.29.1.3 PDB: 1bkz_A 2gal_A* 3gal_A* 4gal_A* 5gal_A* 3zxe_A*
Probab=21.38 E-value=1.5e+02 Score=18.03 Aligned_cols=78 Identities=14% Similarity=0.359 Sum_probs=44.7
Q ss_pred CcccCCceEEEEeCCCCCCcEEEEEEEECCCCCCcEEEEEEcCC----CCcEEEEC--CccEEEEcc-------------
Q psy6837 30 PSFADFHTEYTISEDVPVGTLVAKVKAIDPDLPGTIAYSLVAGD----EGKFVLES--SSGNLKLKD------------- 90 (122)
Q Consensus 30 P~f~~~~~~~~v~E~~~~g~~v~~~~a~D~D~~~~i~y~l~~~~----~~~f~i~~--~~G~i~~~~------------- 90 (122)
|....-+|...+++...+|..+.-.-...++ ..++...|..+. +-.|.+++ ..+.|..+.
T Consensus 1 ~~~~~vP~~~~i~~gl~~G~~i~I~G~v~~~-a~rF~Inl~~g~~~~~dialHfnpRf~~~~vV~Ns~~~g~Wg~Eer~~ 79 (138)
T 3zxf_A 1 PAMSNVPHKSSLPEGIRPGTVLRIRGLVPPN-ASRFHVNLLCGEEQGSDAALHFNPRLDTSEVVFNSKEQGSWGREERGP 79 (138)
T ss_dssp ---CCCCEEEECTTCCCSSEEEEEEEEECTT-CCBEEEEEESSSSTTCCEEEEEEEETTTTEEEEEEEETTEECCCEECS
T ss_pred CCccccCEEeecCCCCCCCCEEEEEEEECCC-CCEEEEEeeeCCCCCCCEEEEEEEEcCCCEEEEECccCCEeCcCEEeC
Confidence 4455667999999999999887544333333 456666666542 23466655 344443321
Q ss_pred cCCccCCCEEEEEEEEEe
Q psy6837 91 TLDREQKDKYRVQVRASD 108 (122)
Q Consensus 91 ~Ld~e~~~~~~l~v~a~D 108 (122)
.+-+.....|++.+.+..
T Consensus 80 ~~PF~~G~~F~l~I~~~~ 97 (138)
T 3zxf_A 80 GVPFQRGQPFEVLIIASD 97 (138)
T ss_dssp SCCCCTTEEEEEEEEECS
T ss_pred CCCccCCCEEEEEEEEcC
Confidence 133344567888877754
No 93
>3ead_A Na/Ca exchange protein; CBD1, calcium regulation, membrane, transmembrane, membrane; 2.25A {Drosophila melanogaster} SCOP: b.1.27.0
Probab=21.12 E-value=1.5e+02 Score=17.96 Aligned_cols=43 Identities=19% Similarity=0.239 Sum_probs=23.5
Q ss_pred CCCcccCCceEEEEeCCCCCCcEEEEEEEEC-CCCCCcEEEEEEcC
Q psy6837 28 SPPSFADFHTEYTISEDVPVGTLVAKVKAID-PDLPGTIAYSLVAG 72 (122)
Q Consensus 28 n~P~f~~~~~~~~v~E~~~~g~~v~~~~a~D-~D~~~~i~y~l~~~ 72 (122)
+.+.+.-..-...|.|+. |+.-.++.-.- .+....+.|....+
T Consensus 3 ~~~~i~F~~~~y~V~E~~--g~~~v~V~R~g~~~~~v~V~y~t~~g 46 (137)
T 3ead_A 3 DPIRMYFEPGHYTVMENC--GEFEVRVVRRGDISTYASVEYETQDG 46 (137)
T ss_dssp --CEEEESSCEEEEEGGG--CEEEEEEEEESCCSSCEEEEEEEECS
T ss_pred CCEEEEEcCCEEEEECCC--eEEEEEEEEECCCCceEEEEEEeECC
Confidence 344443344467788875 55555554443 22245578887765
No 94
>2i9y_A Major latex protein-like protein 28 or MLP-like protein 28; AT1G70830, BET V1-like, structural genomics, protein structure initiative; NMR {Arabidopsis thaliana}
Probab=20.95 E-value=1.1e+02 Score=19.31 Aligned_cols=21 Identities=29% Similarity=0.820 Sum_probs=15.0
Q ss_pred EEEEEECCCCCCcEEEEEEcCC
Q psy6837 52 AKVKAIDPDLPGTIAYSLVAGD 73 (122)
Q Consensus 52 ~~~~a~D~D~~~~i~y~l~~~~ 73 (122)
-++.+.|.+ +..++|++..++
T Consensus 83 Erl~~iD~~-~~~~~y~iieGd 103 (166)
T 2i9y_A 83 ERIEAVEPD-KNLITFRVIEGD 103 (166)
T ss_dssp EEEEEEETT-TTEEEEEECCTT
T ss_pred EEEEEEecc-CcEEEEEEEeCC
Confidence 356667766 778888888664
No 95
>4g06_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati northeast structural genomics consortium (NESG); HET: DT; 2.90A {Streptococcus pneumoniae}
Probab=20.17 E-value=66 Score=18.12 Aligned_cols=16 Identities=19% Similarity=0.403 Sum_probs=11.7
Q ss_pred EEEEEEEecCCCCCcc
Q psy6837 17 CVQLRILDRNDSPPSF 32 (122)
Q Consensus 17 ~v~i~V~dvNdn~P~f 32 (122)
+--++..--|+.+|.|
T Consensus 31 ~KELNlVSWN~~~pKy 46 (79)
T 4g06_A 31 TKEINRVSFNGAPAKF 46 (79)
T ss_dssp EEEEEEEEETTCCCEE
T ss_pred eEEEEEEEeCCCCCCc
Confidence 5666667778888876
No 96
>2ee2_A Contactin-1; neural cell surface protein F3, glycoprotein GP135, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=20.14 E-value=1.3e+02 Score=16.88 Aligned_cols=14 Identities=21% Similarity=0.370 Sum_probs=11.9
Q ss_pred cCCCEEEEEEEEEe
Q psy6837 95 EQKDKYRVQVRASD 108 (122)
Q Consensus 95 e~~~~~~l~v~a~D 108 (122)
+....|.+.|.|.+
T Consensus 82 ~p~t~Y~~~V~A~n 95 (119)
T 2ee2_A 82 LPDTQYFIEVGACN 95 (119)
T ss_dssp CTTCEEEEEEEEEC
T ss_pred CCCCEEEEEEEEEc
Confidence 35678999999998
Done!