BLASTP 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.


Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= psy6839
         (264 letters)

Database: pdbaa 
           62,578 sequences; 14,973,337 total letters

Searching..................................................done



>pdb|1Z2B|A Chain A, Tubulin-Colchicine-Vinblastine: Stathmin-Like Domain
           Complex
 pdb|1Z2B|C Chain C, Tubulin-Colchicine-Vinblastine: Stathmin-Like Domain
           Complex
          Length = 448

 Score =  192 bits (489), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 90/97 (92%), Positives = 93/97 (95%)

Query: 166 EVGINYQPPTVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGE 225
           +VGINYQPPTVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGE
Sbjct: 352 KVGINYQPPTVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGE 411

Query: 226 GMEEGEFSEAREDLAALEKDYEEVGMDSVEGEGEGAE 262
           GMEEGEFSEARED+AALEKDYEEVG+DS E E EG E
Sbjct: 412 GMEEGEFSEAREDMAALEKDYEEVGIDSYEDEDEGEE 448


>pdb|3RYC|A Chain A, Tubulin: Rb3 Stathmin-Like Domain Complex
 pdb|3RYC|C Chain C, Tubulin: Rb3 Stathmin-Like Domain Complex
 pdb|3RYF|A Chain A, Gtp-Tubulin: Rb3 Stathmin-Like Domain Complex
 pdb|3RYF|C Chain C, Gtp-Tubulin: Rb3 Stathmin-Like Domain Complex
 pdb|3RYH|A Chain A, Gmpcpp-Tubulin: Rb3 Stathmin-Like Domain Complex
 pdb|3RYH|C Chain C, Gmpcpp-Tubulin: Rb3 Stathmin-Like Domain Complex
 pdb|3RYI|A Chain A, Gdp-Tubulin: Rb3 Stathmin-Like Domain Complex
 pdb|3RYI|C Chain C, Gdp-Tubulin: Rb3 Stathmin-Like Domain Complex
 pdb|4F61|A Chain A, Tubulin:stathmin-Like Domain Complex
 pdb|4F61|C Chain C, Tubulin:stathmin-Like Domain Complex
 pdb|4F61|E Chain E, Tubulin:stathmin-Like Domain Complex
 pdb|4F61|G Chain G, Tubulin:stathmin-Like Domain Complex
 pdb|4F6R|A Chain A, Tubulin:stathmin-Like Domain Complex
 pdb|3UT5|A Chain A, Tubulin-colchicine-ustiloxin: Stathmin-like Domain Complex
 pdb|3UT5|C Chain C, Tubulin-colchicine-ustiloxin: Stathmin-like Domain Complex
 pdb|4EB6|A Chain A, Tubulin-vinblastine: Stathmin-like Complex
 pdb|4EB6|C Chain C, Tubulin-vinblastine: Stathmin-like Complex
 pdb|4I50|A Chain A, Crystal Structure Of Tubulin-stathmin-ttl-epothilone A
           Complex
 pdb|4I50|C Chain C, Crystal Structure Of Tubulin-stathmin-ttl-epothilone A
           Complex
 pdb|4IIJ|A Chain A, Crystal Structure Of Tubulin-stathmin-ttl-apo Complex
 pdb|4IIJ|C Chain C, Crystal Structure Of Tubulin-stathmin-ttl-apo Complex
          Length = 451

 Score =  187 bits (476), Expect = 4e-48,   Method: Compositional matrix adjust.
 Identities = 86/89 (96%), Positives = 89/89 (100%)

Query: 166 EVGINYQPPTVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGE 225
           +VGINYQPPTVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGE
Sbjct: 352 KVGINYQPPTVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGE 411

Query: 226 GMEEGEFSEAREDLAALEKDYEEVGMDSV 254
           GMEEGEFSEARED+AALEKDYEEVG+DSV
Sbjct: 412 GMEEGEFSEAREDMAALEKDYEEVGVDSV 440


>pdb|4I4T|A Chain A, Crystal Structure Of Tubulin-rb3-ttl-zampanolide Complex
 pdb|4I4T|C Chain C, Crystal Structure Of Tubulin-rb3-ttl-zampanolide Complex
 pdb|4I55|A Chain A, Crystal Structure Of Tubulin-stathmin-ttl Complex
 pdb|4I55|C Chain C, Crystal Structure Of Tubulin-stathmin-ttl Complex
 pdb|4IHJ|A Chain A, Crystal Structure Of Tubulin-stathmin-ttl-adp Complex
 pdb|4IHJ|C Chain C, Crystal Structure Of Tubulin-stathmin-ttl-adp Complex
          Length = 450

 Score =  187 bits (475), Expect = 4e-48,   Method: Compositional matrix adjust.
 Identities = 86/89 (96%), Positives = 89/89 (100%)

Query: 166 EVGINYQPPTVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGE 225
           +VGINYQPPTVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGE
Sbjct: 352 KVGINYQPPTVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGE 411

Query: 226 GMEEGEFSEAREDLAALEKDYEEVGMDSV 254
           GMEEGEFSEARED+AALEKDYEEVG+DSV
Sbjct: 412 GMEEGEFSEAREDMAALEKDYEEVGVDSV 440


>pdb|3HKB|A Chain A, Tubulin: Rb3 Stathmin-Like Domain Complex
 pdb|3HKB|C Chain C, Tubulin: Rb3 Stathmin-Like Domain Complex
 pdb|3HKC|A Chain A, Tubulin-Abt751: Rb3 Stathmin-Like Domain Complex
 pdb|3HKC|C Chain C, Tubulin-Abt751: Rb3 Stathmin-Like Domain Complex
 pdb|3HKD|A Chain A, Tubulin-Tn16 : Rb3 Stathmin-Like Domain Complex
 pdb|3HKD|C Chain C, Tubulin-Tn16 : Rb3 Stathmin-Like Domain Complex
 pdb|3HKE|A Chain A, Tubulin-T138067: Rb3 Stathmin-Like Domain Complex
 pdb|3HKE|C Chain C, Tubulin-T138067: Rb3 Stathmin-Like Domain Complex
 pdb|3N2G|A Chain A, Tubulin-Nsc 613863: Rb3 Stathmin-Like Domain Complex
 pdb|3N2G|C Chain C, Tubulin-Nsc 613863: Rb3 Stathmin-Like Domain Complex
 pdb|3N2K|A Chain A, Tubulin-Nsc 613862: Rb3 Stathmin-Like Domain Complex
 pdb|3N2K|C Chain C, Tubulin-Nsc 613862: Rb3 Stathmin-Like Domain Complex
          Length = 451

 Score =  187 bits (475), Expect = 5e-48,   Method: Compositional matrix adjust.
 Identities = 86/89 (96%), Positives = 89/89 (100%)

Query: 166 EVGINYQPPTVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGE 225
           +VGINYQPPTVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGE
Sbjct: 352 KVGINYQPPTVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGE 411

Query: 226 GMEEGEFSEAREDLAALEKDYEEVGMDSV 254
           GMEEGEFSEARED+AALEKDYEEVG+DSV
Sbjct: 412 GMEEGEFSEAREDMAALEKDYEEVGVDSV 440


>pdb|1FFX|A Chain A, Tubulin:stathmin-Like Domain Complex
 pdb|1FFX|C Chain C, Tubulin:stathmin-Like Domain Complex
 pdb|1IA0|A Chain A, Kif1a Head-Microtubule Complex Structure In Atp-Form
 pdb|2HXF|A Chain A, Kif1a Head-Microtubule Complex Structure In Amppnp-Form
 pdb|2HXH|A Chain A, Kif1a Head-Microtubule Complex Structure In Adp-Form
 pdb|2P4N|A Chain A, Human Monomeric Kinesin (1bg2) And Bovine Tubulin (1jff)
           Docked Into The 9-Angstrom Cryo-Em Map Of
           Nucleotide-Free Kinesin Complexed To The Microtubule
          Length = 451

 Score =  186 bits (471), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 85/89 (95%), Positives = 89/89 (100%)

Query: 166 EVGINYQPPTVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGE 225
           +VGINY+PPTVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGE
Sbjct: 352 KVGINYEPPTVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGE 411

Query: 226 GMEEGEFSEAREDLAALEKDYEEVGMDSV 254
           GMEEGEFSEARED+AALEKDYEEVG+DSV
Sbjct: 412 GMEEGEFSEAREDMAALEKDYEEVGVDSV 440


>pdb|1TUB|A Chain A, Tubulin Alpha-Beta Dimer, Electron Diffraction
 pdb|1TVK|A Chain A, The Binding Mode Of Epothilone A On A,B-Tubulin By
           Electron Crystallography
          Length = 440

 Score =  185 bits (470), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 85/89 (95%), Positives = 89/89 (100%)

Query: 166 EVGINYQPPTVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGE 225
           +VGINY+PPTVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGE
Sbjct: 352 KVGINYEPPTVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGE 411

Query: 226 GMEEGEFSEAREDLAALEKDYEEVGMDSV 254
           GMEEGEFSEARED+AALEKDYEEVG+DSV
Sbjct: 412 GMEEGEFSEAREDMAALEKDYEEVGVDSV 440


>pdb|1SA0|A Chain A, Tubulin-Colchicine: Stathmin-Like Domain Complex
 pdb|1SA0|C Chain C, Tubulin-Colchicine: Stathmin-Like Domain Complex
 pdb|1SA1|A Chain A, Tubulin-Podophyllotoxin: Stathmin-Like Domain Complex
 pdb|1SA1|C Chain C, Tubulin-Podophyllotoxin: Stathmin-Like Domain Complex
 pdb|3EDL|F Chain F, Kinesin13-Microtubule Ring Complex
          Length = 451

 Score =  185 bits (470), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 85/89 (95%), Positives = 89/89 (100%)

Query: 166 EVGINYQPPTVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGE 225
           +VGINY+PPTVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGE
Sbjct: 352 KVGINYEPPTVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGE 411

Query: 226 GMEEGEFSEAREDLAALEKDYEEVGMDSV 254
           GMEEGEFSEARED+AALEKDYEEVG+DSV
Sbjct: 412 GMEEGEFSEAREDMAALEKDYEEVGVDSV 440


>pdb|2XRP|B Chain B, Human Doublecortin N-Dc Repeat (1mjd) And Mammalian
           Tubulin (1jff And 3hke) Docked Into The 8-Angstrom
           Cryo-Em Map Of Doublecortin-Stabilised Microtubules
 pdb|2XRP|D Chain D, Human Doublecortin N-Dc Repeat (1mjd) And Mammalian
           Tubulin (1jff And 3hke) Docked Into The 8-Angstrom
           Cryo-Em Map Of Doublecortin-Stabilised Microtubules
 pdb|2XRP|F Chain F, Human Doublecortin N-Dc Repeat (1mjd) And Mammalian
           Tubulin (1jff And 3hke) Docked Into The 8-Angstrom
           Cryo-Em Map Of Doublecortin-Stabilised Microtubules
 pdb|2XRP|H Chain H, Human Doublecortin N-Dc Repeat (1mjd) And Mammalian
           Tubulin (1jff And 3hke) Docked Into The 8-Angstrom
           Cryo-Em Map Of Doublecortin-Stabilised Microtubules
 pdb|4ATU|B Chain B, Human Doublecortin N-Dc Repeat Plus Linker, And Tubulin
           (2xrp) Docked Into An 8a Cryo-Em Map Of
           Doublecortin-Stabilised Microtubules Reconstructed In
           Absence Of Kinesin
 pdb|4ATU|D Chain D, Human Doublecortin N-Dc Repeat Plus Linker, And Tubulin
           (2xrp) Docked Into An 8a Cryo-Em Map Of
           Doublecortin-Stabilised Microtubules Reconstructed In
           Absence Of Kinesin
 pdb|4ATU|F Chain F, Human Doublecortin N-Dc Repeat Plus Linker, And Tubulin
           (2xrp) Docked Into An 8a Cryo-Em Map Of
           Doublecortin-Stabilised Microtubules Reconstructed In
           Absence Of Kinesin
 pdb|4ATU|H Chain H, Human Doublecortin N-Dc Repeat Plus Linker, And Tubulin
           (2xrp) Docked Into An 8a Cryo-Em Map Of
           Doublecortin-Stabilised Microtubules Reconstructed In
           Absence Of Kinesin
 pdb|4ATX|B Chain B, Rigor Kinesin Motor Domain With An Ordered Neck-Linker,
           Docked On Tubulin Dimer, Modelled Into The 8a Cryo-Em
           Map Of Doublecortin-Microtubules Decorated With Kinesin
 pdb|4AQV|A Chain A, Model Of Human Kinesin-5 Motor Domain (3hqd) And Mammalian
           Tubulin Heterodimer (1jff) Docked Into The 9.7-angstrom
           Cryo-em Map Of Microtubule-bound Kinesin-5 Motor Domain
           In The Ampppnp State.
 pdb|4AQW|A Chain A, Model Of Human Kinesin-5 Motor Domain (1ii6, 3hqd) And
           Mammalian Tubulin Heterodimer (1jff) Docked Into The
           9.5- Angstrom Cryo-em Map Of Microtubule-bound Kinesin-5
           Motor Domain In The Rigor State
          Length = 452

 Score =  185 bits (470), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 85/89 (95%), Positives = 89/89 (100%)

Query: 166 EVGINYQPPTVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGE 225
           +VGINY+PPTVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGE
Sbjct: 352 KVGINYEPPTVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGE 411

Query: 226 GMEEGEFSEAREDLAALEKDYEEVGMDSV 254
           GMEEGEFSEARED+AALEKDYEEVG+DSV
Sbjct: 412 GMEEGEFSEAREDMAALEKDYEEVGVDSV 440


>pdb|1JFF|A Chain A, Refined Structure Of Alpha-Beta Tubulin From Zinc-Induced
           Sheets Stabilized With Taxol
 pdb|3EDL|A Chain A, Kinesin13-Microtubule Ring Complex
 pdb|3DCO|A Chain A, Drosophila Nod (3dc4) And Bovine Tubulin (1jff) Docked
           Into The 11-Angstrom Cryo-Em Map Of Nucleotide-Free Nod
           Complexed To The Microtubule
 pdb|2WBE|A Chain A, Kinesin-5-Tubulin Complex With Amppnp
 pdb|3IZ0|A Chain A, Human Ndc80 Bonsai Decorated Microtubule
 pdb|4ABO|B Chain B, Mal3 Ch Domain Homology Model And Mammalian Tubulin (2xrp)
           Docked Into The 8.6-Angstrom Cryo-Em Map Of
           Mal3-Gtpgammas-Microtubules
 pdb|4ABO|D Chain D, Mal3 Ch Domain Homology Model And Mammalian Tubulin (2xrp)
           Docked Into The 8.6-Angstrom Cryo-Em Map Of
           Mal3-Gtpgammas-Microtubules
 pdb|4ABO|F Chain F, Mal3 Ch Domain Homology Model And Mammalian Tubulin (2xrp)
           Docked Into The 8.6-Angstrom Cryo-Em Map Of
           Mal3-Gtpgammas-Microtubules
 pdb|4ABO|H Chain H, Mal3 Ch Domain Homology Model And Mammalian Tubulin (2xrp)
           Docked Into The 8.6-Angstrom Cryo-Em Map Of
           Mal3-Gtpgammas-Microtubules
 pdb|3J1T|B Chain B, High Affinity Dynein Microtubule Binding Domain - Tubulin
           Complex
 pdb|3J1U|B Chain B, Low Affinity Dynein Microtubule Binding Domain - Tubulin
           Complex
          Length = 451

 Score =  185 bits (470), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 85/89 (95%), Positives = 89/89 (100%)

Query: 166 EVGINYQPPTVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGE 225
           +VGINY+PPTVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGE
Sbjct: 352 KVGINYEPPTVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGE 411

Query: 226 GMEEGEFSEAREDLAALEKDYEEVGMDSV 254
           GMEEGEFSEARED+AALEKDYEEVG+DSV
Sbjct: 412 GMEEGEFSEAREDMAALEKDYEEVGVDSV 440


>pdb|3DU7|A Chain A, Tubulin-Colchicine-Phomopsin A: Stathmin-Like Domain
           Complex
 pdb|3DU7|C Chain C, Tubulin-Colchicine-Phomopsin A: Stathmin-Like Domain
           Complex
 pdb|3E22|A Chain A, Tubulin-Colchicine-Soblidotin: Stathmin-Like Domain
           Complex
 pdb|3E22|C Chain C, Tubulin-Colchicine-Soblidotin: Stathmin-Like Domain
           Complex
          Length = 449

 Score =  184 bits (467), Expect = 4e-47,   Method: Compositional matrix adjust.
 Identities = 84/88 (95%), Positives = 87/88 (98%)

Query: 166 EVGINYQPPTVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGE 225
           +VGINYQPPTVVPGGDLAKVQRAVCMLSNTTA+AEAWARLDHKFDLMYAKRAFVHWYVGE
Sbjct: 352 KVGINYQPPTVVPGGDLAKVQRAVCMLSNTTAVAEAWARLDHKFDLMYAKRAFVHWYVGE 411

Query: 226 GMEEGEFSEAREDLAALEKDYEEVGMDS 253
           GMEEGEFSEARED+AALEKDYEEVG DS
Sbjct: 412 GMEEGEFSEAREDMAALEKDYEEVGADS 439


>pdb|4DRX|A Chain A, Gtp-Tubulin In Complex With A Darpin
 pdb|4DRX|C Chain C, Gtp-Tubulin In Complex With A Darpin
          Length = 437

 Score =  182 bits (461), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 83/86 (96%), Positives = 86/86 (100%)

Query: 166 EVGINYQPPTVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGE 225
           +VGINYQPPTVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGE
Sbjct: 352 KVGINYQPPTVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGE 411

Query: 226 GMEEGEFSEAREDLAALEKDYEEVGM 251
           GMEEGEFSEARED+AALEKDYEEVG+
Sbjct: 412 GMEEGEFSEAREDMAALEKDYEEVGV 437


>pdb|4FFB|A Chain A, A Tog:alphaBETA-Tubulin Complex Structure Reveals
           Conformation-Based Mechanisms For A Microtubule
           Polymerase
          Length = 447

 Score =  153 bits (386), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 71/94 (75%), Positives = 78/94 (82%)

Query: 166 EVGINYQPPTVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGE 225
           ++GI Y+PPT  P   LA V RAVCMLSNTT+IAEAW R+D KFDLMYAKRAFVHWYVGE
Sbjct: 353 KIGICYEPPTATPNSQLATVDRAVCMLSNTTSIAEAWKRIDRKFDLMYAKRAFVHWYVGE 412

Query: 226 GMEEGEFSEAREDLAALEKDYEEVGMDSVEGEGE 259
           GMEEGEF+EAREDLAALE+DY EVG DS   E E
Sbjct: 413 GMEEGEFTEAREDLAALERDYIEVGADSYAEEEE 446


>pdb|3RYC|B Chain B, Tubulin: Rb3 Stathmin-Like Domain Complex
 pdb|3RYC|D Chain D, Tubulin: Rb3 Stathmin-Like Domain Complex
 pdb|3RYF|B Chain B, Gtp-Tubulin: Rb3 Stathmin-Like Domain Complex
 pdb|3RYF|D Chain D, Gtp-Tubulin: Rb3 Stathmin-Like Domain Complex
 pdb|3RYH|B Chain B, Gmpcpp-Tubulin: Rb3 Stathmin-Like Domain Complex
 pdb|3RYH|D Chain D, Gmpcpp-Tubulin: Rb3 Stathmin-Like Domain Complex
 pdb|3RYI|B Chain B, Gdp-Tubulin: Rb3 Stathmin-Like Domain Complex
 pdb|3RYI|D Chain D, Gdp-Tubulin: Rb3 Stathmin-Like Domain Complex
 pdb|4F6R|B Chain B, Tubulin:stathmin-Like Domain Complex
 pdb|3UT5|B Chain B, Tubulin-colchicine-ustiloxin: Stathmin-like Domain Complex
 pdb|3UT5|D Chain D, Tubulin-colchicine-ustiloxin: Stathmin-like Domain Complex
 pdb|4EB6|B Chain B, Tubulin-vinblastine: Stathmin-like Complex
 pdb|4EB6|D Chain D, Tubulin-vinblastine: Stathmin-like Complex
          Length = 445

 Score = 61.6 bits (148), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 28/76 (36%), Positives = 45/76 (59%), Gaps = 12/76 (15%)

Query: 185 VQRAVC------------MLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEF 232
           V+ AVC             + N+TAI E + R+  +F  M+ ++AF+HWY GEGM+E EF
Sbjct: 349 VKTAVCDIPPRGLKMSSTFIGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEF 408

Query: 233 SEAREDLAALEKDYEE 248
           +EA  ++  L  +Y++
Sbjct: 409 TEAESNMNDLVSEYQQ 424


>pdb|1Z2B|B Chain B, Tubulin-Colchicine-Vinblastine: Stathmin-Like Domain
           Complex
 pdb|1Z2B|D Chain D, Tubulin-Colchicine-Vinblastine: Stathmin-Like Domain
           Complex
          Length = 445

 Score = 61.6 bits (148), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 24/64 (37%), Positives = 43/64 (67%)

Query: 185 VQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEK 244
           ++ +   + N+TAI E + R+  +F  M+ ++AF+HWY GEGM+E EF+EA  ++  L  
Sbjct: 361 LKMSATFIGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVS 420

Query: 245 DYEE 248
           +Y++
Sbjct: 421 EYQQ 424


>pdb|3DU7|B Chain B, Tubulin-Colchicine-Phomopsin A: Stathmin-Like Domain
           Complex
 pdb|3DU7|D Chain D, Tubulin-Colchicine-Phomopsin A: Stathmin-Like Domain
           Complex
 pdb|3E22|B Chain B, Tubulin-Colchicine-Soblidotin: Stathmin-Like Domain
           Complex
 pdb|3E22|D Chain D, Tubulin-Colchicine-Soblidotin: Stathmin-Like Domain
           Complex
 pdb|3HKB|B Chain B, Tubulin: Rb3 Stathmin-Like Domain Complex
 pdb|3HKB|D Chain D, Tubulin: Rb3 Stathmin-Like Domain Complex
 pdb|3HKC|B Chain B, Tubulin-Abt751: Rb3 Stathmin-Like Domain Complex
 pdb|3HKC|D Chain D, Tubulin-Abt751: Rb3 Stathmin-Like Domain Complex
 pdb|3HKD|B Chain B, Tubulin-Tn16 : Rb3 Stathmin-Like Domain Complex
 pdb|3HKD|D Chain D, Tubulin-Tn16 : Rb3 Stathmin-Like Domain Complex
 pdb|3HKE|B Chain B, Tubulin-T138067: Rb3 Stathmin-Like Domain Complex
 pdb|3HKE|D Chain D, Tubulin-T138067: Rb3 Stathmin-Like Domain Complex
 pdb|3N2G|B Chain B, Tubulin-Nsc 613863: Rb3 Stathmin-Like Domain Complex
 pdb|3N2G|D Chain D, Tubulin-Nsc 613863: Rb3 Stathmin-Like Domain Complex
 pdb|3N2K|B Chain B, Tubulin-Nsc 613862: Rb3 Stathmin-Like Domain Complex
 pdb|3N2K|D Chain D, Tubulin-Nsc 613862: Rb3 Stathmin-Like Domain Complex
          Length = 445

 Score = 61.6 bits (148), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 24/64 (37%), Positives = 43/64 (67%)

Query: 185 VQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEK 244
           ++ +   + N+TAI E + R+  +F  M+ ++AF+HWY GEGM+E EF+EA  ++  L  
Sbjct: 361 LKMSATFIGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVS 420

Query: 245 DYEE 248
           +Y++
Sbjct: 421 EYQQ 424


>pdb|4DRX|B Chain B, Gtp-Tubulin In Complex With A Darpin
 pdb|4DRX|D Chain D, Gtp-Tubulin In Complex With A Darpin
          Length = 431

 Score = 61.6 bits (148), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 24/64 (37%), Positives = 43/64 (67%)

Query: 185 VQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEK 244
           ++ +   + N+TAI E + R+  +F  M+ ++AF+HWY GEGM+E EF+EA  ++  L  
Sbjct: 361 LKMSATFIGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVS 420

Query: 245 DYEE 248
           +Y++
Sbjct: 421 EYQQ 424


>pdb|4F61|B Chain B, Tubulin:stathmin-Like Domain Complex
 pdb|4F61|D Chain D, Tubulin:stathmin-Like Domain Complex
 pdb|4F61|F Chain F, Tubulin:stathmin-Like Domain Complex
 pdb|4F61|H Chain H, Tubulin:stathmin-Like Domain Complex
          Length = 445

 Score = 61.6 bits (148), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 24/64 (37%), Positives = 43/64 (67%)

Query: 185 VQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEK 244
           ++ +   + N+TAI E + R+  +F  M+ ++AF+HWY GEGM+E EF+EA  ++  L  
Sbjct: 361 LKMSATFIGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVS 420

Query: 245 DYEE 248
           +Y++
Sbjct: 421 EYQQ 424


>pdb|4I4T|B Chain B, Crystal Structure Of Tubulin-rb3-ttl-zampanolide Complex
 pdb|4I4T|D Chain D, Crystal Structure Of Tubulin-rb3-ttl-zampanolide Complex
 pdb|4I50|B Chain B, Crystal Structure Of Tubulin-stathmin-ttl-epothilone A
           Complex
 pdb|4I50|D Chain D, Crystal Structure Of Tubulin-stathmin-ttl-epothilone A
           Complex
 pdb|4I55|B Chain B, Crystal Structure Of Tubulin-stathmin-ttl Complex
 pdb|4I55|D Chain D, Crystal Structure Of Tubulin-stathmin-ttl Complex
 pdb|4IIJ|B Chain B, Crystal Structure Of Tubulin-stathmin-ttl-apo Complex
 pdb|4IIJ|D Chain D, Crystal Structure Of Tubulin-stathmin-ttl-apo Complex
 pdb|4IHJ|B Chain B, Crystal Structure Of Tubulin-stathmin-ttl-adp Complex
 pdb|4IHJ|D Chain D, Crystal Structure Of Tubulin-stathmin-ttl-adp Complex
          Length = 445

 Score = 61.6 bits (148), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 24/64 (37%), Positives = 43/64 (67%)

Query: 185 VQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEK 244
           ++ +   + N+TAI E + R+  +F  M+ ++AF+HWY GEGM+E EF+EA  ++  L  
Sbjct: 361 LKMSATFIGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVS 420

Query: 245 DYEE 248
           +Y++
Sbjct: 421 EYQQ 424


>pdb|1TUB|B Chain B, Tubulin Alpha-Beta Dimer, Electron Diffraction
 pdb|1TVK|B Chain B, The Binding Mode Of Epothilone A On A,B-Tubulin By
           Electron Crystallography
 pdb|3J1T|C Chain C, High Affinity Dynein Microtubule Binding Domain - Tubulin
           Complex
 pdb|3J1U|C Chain C, Low Affinity Dynein Microtubule Binding Domain - Tubulin
           Complex
          Length = 427

 Score = 61.6 bits (148), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 24/57 (42%), Positives = 40/57 (70%)

Query: 192 LSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEE 248
           + N+TAI E + R+  +F  M+ ++AF+HWY GEGM+E EF+EA  ++  L  +Y++
Sbjct: 368 IGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQ 424


>pdb|4FFB|B Chain B, A Tog:alphaBETA-Tubulin Complex Structure Reveals
           Conformation-Based Mechanisms For A Microtubule
           Polymerase
          Length = 463

 Score = 61.2 bits (147), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 31/87 (35%), Positives = 50/87 (57%), Gaps = 12/87 (13%)

Query: 185 VQRAVC------------MLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEF 232
           VQ AVC             ++N+T+I E + R+  +F  M+ ++AF+HWY  EGM+E EF
Sbjct: 349 VQTAVCSVAPQGLDMAATFIANSTSIQELFKRVGDQFSAMFKRKAFLHWYTSEGMDELEF 408

Query: 233 SEAREDLAALEKDYEEVGMDSVEGEGE 259
           SEA  ++  L  +Y++    +VE + E
Sbjct: 409 SEAESNMNDLVSEYQQYQEATVEDDEE 435


>pdb|1FFX|B Chain B, Tubulin:stathmin-Like Domain Complex
 pdb|1FFX|D Chain D, Tubulin:stathmin-Like Domain Complex
 pdb|1JFF|B Chain B, Refined Structure Of Alpha-Beta Tubulin From Zinc-Induced
           Sheets Stabilized With Taxol
 pdb|1IA0|B Chain B, Kif1a Head-Microtubule Complex Structure In Atp-Form
 pdb|1SA0|B Chain B, Tubulin-Colchicine: Stathmin-Like Domain Complex
 pdb|1SA0|D Chain D, Tubulin-Colchicine: Stathmin-Like Domain Complex
 pdb|1SA1|B Chain B, Tubulin-Podophyllotoxin: Stathmin-Like Domain Complex
 pdb|1SA1|D Chain D, Tubulin-Podophyllotoxin: Stathmin-Like Domain Complex
 pdb|2HXF|B Chain B, Kif1a Head-Microtubule Complex Structure In Amppnp-Form
 pdb|2HXH|B Chain B, Kif1a Head-Microtubule Complex Structure In Adp-Form
 pdb|2P4N|B Chain B, Human Monomeric Kinesin (1bg2) And Bovine Tubulin (1jff)
           Docked Into The 9-Angstrom Cryo-Em Map Of
           Nucleotide-Free Kinesin Complexed To The Microtubule
 pdb|3EDL|B Chain B, Kinesin13-Microtubule Ring Complex
 pdb|3EDL|G Chain G, Kinesin13-Microtubule Ring Complex
 pdb|3DCO|B Chain B, Drosophila Nod (3dc4) And Bovine Tubulin (1jff) Docked
           Into The 11-Angstrom Cryo-Em Map Of Nucleotide-Free Nod
           Complexed To The Microtubule
 pdb|2WBE|B Chain B, Kinesin-5-Tubulin Complex With Amppnp
 pdb|3IZ0|B Chain B, Human Ndc80 Bonsai Decorated Microtubule
 pdb|4ABO|A Chain A, Mal3 Ch Domain Homology Model And Mammalian Tubulin (2xrp)
           Docked Into The 8.6-Angstrom Cryo-Em Map Of
           Mal3-Gtpgammas-Microtubules
 pdb|4ABO|C Chain C, Mal3 Ch Domain Homology Model And Mammalian Tubulin (2xrp)
           Docked Into The 8.6-Angstrom Cryo-Em Map Of
           Mal3-Gtpgammas-Microtubules
 pdb|4ABO|E Chain E, Mal3 Ch Domain Homology Model And Mammalian Tubulin (2xrp)
           Docked Into The 8.6-Angstrom Cryo-Em Map Of
           Mal3-Gtpgammas-Microtubules
 pdb|4ABO|G Chain G, Mal3 Ch Domain Homology Model And Mammalian Tubulin (2xrp)
           Docked Into The 8.6-Angstrom Cryo-Em Map Of
           Mal3-Gtpgammas-Microtubules
          Length = 445

 Score = 61.2 bits (147), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 24/57 (42%), Positives = 40/57 (70%)

Query: 192 LSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEE 248
           + N+TAI E + R+  +F  M+ ++AF+HWY GEGM+E EF+EA  ++  L  +Y++
Sbjct: 368 IGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQ 424


>pdb|2XRP|A Chain A, Human Doublecortin N-Dc Repeat (1mjd) And Mammalian
           Tubulin (1jff And 3hke) Docked Into The 8-Angstrom
           Cryo-Em Map Of Doublecortin-Stabilised Microtubules
 pdb|2XRP|C Chain C, Human Doublecortin N-Dc Repeat (1mjd) And Mammalian
           Tubulin (1jff And 3hke) Docked Into The 8-Angstrom
           Cryo-Em Map Of Doublecortin-Stabilised Microtubules
 pdb|2XRP|E Chain E, Human Doublecortin N-Dc Repeat (1mjd) And Mammalian
           Tubulin (1jff And 3hke) Docked Into The 8-Angstrom
           Cryo-Em Map Of Doublecortin-Stabilised Microtubules
 pdb|2XRP|G Chain G, Human Doublecortin N-Dc Repeat (1mjd) And Mammalian
           Tubulin (1jff And 3hke) Docked Into The 8-Angstrom
           Cryo-Em Map Of Doublecortin-Stabilised Microtubules
 pdb|4ATU|A Chain A, Human Doublecortin N-Dc Repeat Plus Linker, And Tubulin
           (2xrp) Docked Into An 8a Cryo-Em Map Of
           Doublecortin-Stabilised Microtubules Reconstructed In
           Absence Of Kinesin
 pdb|4ATU|C Chain C, Human Doublecortin N-Dc Repeat Plus Linker, And Tubulin
           (2xrp) Docked Into An 8a Cryo-Em Map Of
           Doublecortin-Stabilised Microtubules Reconstructed In
           Absence Of Kinesin
 pdb|4ATU|E Chain E, Human Doublecortin N-Dc Repeat Plus Linker, And Tubulin
           (2xrp) Docked Into An 8a Cryo-Em Map Of
           Doublecortin-Stabilised Microtubules Reconstructed In
           Absence Of Kinesin
 pdb|4ATU|G Chain G, Human Doublecortin N-Dc Repeat Plus Linker, And Tubulin
           (2xrp) Docked Into An 8a Cryo-Em Map Of
           Doublecortin-Stabilised Microtubules Reconstructed In
           Absence Of Kinesin
 pdb|4ATX|A Chain A, Rigor Kinesin Motor Domain With An Ordered Neck-Linker,
           Docked On Tubulin Dimer, Modelled Into The 8a Cryo-Em
           Map Of Doublecortin-Microtubules Decorated With Kinesin
 pdb|4AQV|B Chain B, Model Of Human Kinesin-5 Motor Domain (3hqd) And Mammalian
           Tubulin Heterodimer (1jff) Docked Into The 9.7-angstrom
           Cryo-em Map Of Microtubule-bound Kinesin-5 Motor Domain
           In The Ampppnp State.
 pdb|4AQW|B Chain B, Model Of Human Kinesin-5 Motor Domain (1ii6, 3hqd) And
           Mammalian Tubulin Heterodimer (1jff) Docked Into The
           9.5- Angstrom Cryo-em Map Of Microtubule-bound Kinesin-5
           Motor Domain In The Rigor State
          Length = 445

 Score = 61.2 bits (147), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 24/57 (42%), Positives = 40/57 (70%)

Query: 192 LSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEE 248
           + N+TAI E + R+  +F  M+ ++AF+HWY GEGM+E EF+EA  ++  L  +Y++
Sbjct: 368 IGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQ 424


>pdb|2BTO|A Chain A, Structure Of Btuba From Prosthecobacter Dejongeii
 pdb|2BTO|B Chain B, Structure Of Btuba From Prosthecobacter Dejongeii
 pdb|2BTQ|A Chain A, Structure Of Btubab Heterodimer From Prosthecobacter
           Dejongeii
          Length = 473

 Score = 50.4 bits (119), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 20/62 (32%), Positives = 37/62 (59%)

Query: 186 QRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKD 245
           ++++ +L+N T IA    R+ H FD ++ ++AF +WY+ EGM E + +  R     L + 
Sbjct: 367 RKSMVLLANNTEIARVLDRICHNFDKLWQRKAFANWYLNEGMSEEQINVLRASAQELVQS 426

Query: 246 YE 247
           Y+
Sbjct: 427 YQ 428


>pdb|2E4H|B Chain B, Solution Structure Of Cytoskeletal Protein In Complex With
           Tubulin Tail
          Length = 36

 Score = 48.9 bits (115), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 23/25 (92%), Positives = 25/25 (100%)

Query: 230 GEFSEAREDLAALEKDYEEVGMDSV 254
           GEFSEARED+AALEKDYEEVG+DSV
Sbjct: 1   GEFSEAREDMAALEKDYEEVGVDSV 25


>pdb|2BTQ|B Chain B, Structure Of Btubab Heterodimer From Prosthecobacter
           Dejongeii
          Length = 426

 Score = 46.6 bits (109), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 20/57 (35%), Positives = 31/57 (54%)

Query: 192 LSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEE 248
           L N T IA  + RL  +FD+M+   A+ HWY   G+     ++AR  +A L + Y +
Sbjct: 368 LVNHTGIAAVFERLIAQFDIMFDNHAYTHWYENAGVSRDMMAKARNQIATLAQSYRD 424


>pdb|2D2E|A Chain A, Crystal Structure Of Atypical Cytoplasmic Abc-Atpase Sufc
           From Thermus Thermophilus Hb8
 pdb|2D2F|A Chain A, Crystal Structure Of Atypical Cytoplasmic Abc-Atpase Sufc
           From Thermus Thermophilus Hb8
          Length = 250

 Score = 30.4 bits (67), Expect = 0.95,   Method: Compositional matrix adjust.
 Identities = 17/65 (26%), Positives = 29/65 (44%), Gaps = 2/65 (3%)

Query: 169 INYQPPTVVPGGDLAKVQRAVCM--LSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEG 226
           + +Q P  VPG  +A   R      L     +AE W ++    +L+    +++  Y+ EG
Sbjct: 84  LAFQYPVEVPGVTIANFLRLALQAKLGREVGVAEFWTKVKKALELLDWDESYLSRYLNEG 143

Query: 227 MEEGE 231
              GE
Sbjct: 144 FSGGE 148


>pdb|1JQO|A Chain A, Crystal Structure Of C4-Form Phosphoenolpyruvate
           Carboxylase From Maize
 pdb|1JQO|B Chain B, Crystal Structure Of C4-Form Phosphoenolpyruvate
           Carboxylase From Maize
          Length = 970

 Score = 29.3 bits (64), Expect = 2.2,   Method: Compositional matrix adjust.
 Identities = 46/182 (25%), Positives = 70/182 (38%), Gaps = 29/182 (15%)

Query: 85  SSRKSSIVSLIPAPSSATANHRLWPEEENS-------NGTSIL------AEDEFYDAVES 131
           S R + ++  I        ++R WPE++          G   L        DE  D + +
Sbjct: 459 SERHTDVIDAITT-HLGIGSYREWPEDKRQEWLLSELRGKRPLLPPDLPQTDEIADVIGA 517

Query: 132 GSQNSEDLGSSRKSSIVSLIPAPSSATANHRLWPEVGINYQPPTVVPGGD-LAKVQRAVC 190
               +E    S    I+S+  APS   A   L  E G+  QP  VVP  + LA +Q A  
Sbjct: 518 FHVLAELPPDSFGPYIISMATAPSDVLAVELLQRECGVR-QPLPVVPLFERLADLQSA-- 574

Query: 191 MLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFS------EAREDLAALEK 244
                 A  E    +D   D +  K+  +  Y   G + G  S       A+E++A + K
Sbjct: 575 -----PASVERLFSVDWYMDRIKGKQQVMVGYSDSGKDAGRLSAAWQLYRAQEEMAQVAK 629

Query: 245 DY 246
            Y
Sbjct: 630 RY 631


>pdb|3CQD|A Chain A, Structure Of The Tetrameric Inhibited Form Of
           Phosphofructokinase-2 From Escherichia Coli
 pdb|3CQD|B Chain B, Structure Of The Tetrameric Inhibited Form Of
           Phosphofructokinase-2 From Escherichia Coli
 pdb|3N1C|A Chain A, Crystal Structure Of The Phosphofructokinase-2 From
           Escherichia Coli In Complex With Fructose-6-Phosphate
 pdb|3N1C|B Chain B, Crystal Structure Of The Phosphofructokinase-2 From
           Escherichia Coli In Complex With Fructose-6-Phosphate
 pdb|3N1C|C Chain C, Crystal Structure Of The Phosphofructokinase-2 From
           Escherichia Coli In Complex With Fructose-6-Phosphate
 pdb|3N1C|D Chain D, Crystal Structure Of The Phosphofructokinase-2 From
           Escherichia Coli In Complex With Fructose-6-Phosphate
 pdb|3UMO|A Chain A, Crystal Structure Of The Phosphofructokinase-2 From
           Escherichia Coli In Complex With Potassium
 pdb|3UMO|B Chain B, Crystal Structure Of The Phosphofructokinase-2 From
           Escherichia Coli In Complex With Potassium
 pdb|3UMP|A Chain A, Crystal Structure Of The Phosphofructokinase-2 From
           Escherichia Coli In Complex With Cesium And Atp
 pdb|3UMP|B Chain B, Crystal Structure Of The Phosphofructokinase-2 From
           Escherichia Coli In Complex With Cesium And Atp
 pdb|3UQD|A Chain A, Crystal Structure Of The Phosphofructokinase-2 From
           Escherichia Coli In Complex With Substrates And Products
 pdb|3UQD|B Chain B, Crystal Structure Of The Phosphofructokinase-2 From
           Escherichia Coli In Complex With Substrates And Products
 pdb|3UQD|C Chain C, Crystal Structure Of The Phosphofructokinase-2 From
           Escherichia Coli In Complex With Substrates And Products
 pdb|3UQD|D Chain D, Crystal Structure Of The Phosphofructokinase-2 From
           Escherichia Coli In Complex With Substrates And Products
          Length = 309

 Score = 29.3 bits (64), Expect = 2.3,   Method: Compositional matrix adjust.
 Identities = 18/52 (34%), Positives = 27/52 (51%), Gaps = 1/52 (1%)

Query: 148 VSLIPAPSSATANHRLWPEVGINYQPPTVVPGGDLAKVQRAVCMLSNT-TAI 198
           ++L P+  SAT   +++PE  +    P   PGG    V RA+  L  + TAI
Sbjct: 7   LTLAPSLDSATITPQIYPEGKLRCTAPVFEPGGGGINVARAIAHLGGSATAI 58


  Database: pdbaa
    Posted date:  Mar 3, 2013 10:34 PM
  Number of letters in database: 14,973,337
  Number of sequences in database:  62,578
  
Lambda     K      H
   0.313    0.130    0.375 

Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 7,975,035
Number of Sequences: 62578
Number of extensions: 331499
Number of successful extensions: 558
Number of sequences better than 100.0: 30
Number of HSP's better than 100.0 without gapping: 27
Number of HSP's successfully gapped in prelim test: 3
Number of HSP's that attempted gapping in prelim test: 531
Number of HSP's gapped (non-prelim): 30
length of query: 264
length of database: 14,973,337
effective HSP length: 97
effective length of query: 167
effective length of database: 8,903,271
effective search space: 1486846257
effective search space used: 1486846257
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)
S2: 50 (23.9 bits)