Query psy6839
Match_columns 264
No_of_seqs 160 out of 794
Neff 6.6
Searched_HMMs 29240
Date Fri Aug 16 19:44:07 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy6839.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/6839hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3ryc_A Tubulin alpha chain; al 100.0 3.2E-62 1.1E-66 468.0 8.3 244 7-264 142-451 (451)
2 3ryc_B Tubulin beta chain; alp 100.0 2.5E-60 8.4E-65 454.3 7.5 228 7-256 140-432 (445)
3 3cb2_A Gamma-1-tubulin, tubuli 100.0 1.1E-53 3.6E-58 412.2 13.0 226 16-256 147-445 (475)
4 2btq_B Tubulin btubb; structur 100.0 1.6E-52 5.4E-57 400.0 10.1 214 16-249 146-425 (426)
5 2bto_A Tubulin btuba; bacteria 100.0 5E-50 1.7E-54 386.8 11.7 219 16-254 149-435 (473)
6 2vap_A FTSZ, cell division pro 99.5 1E-15 3.6E-20 143.0 -1.1 151 9-193 134-337 (364)
7 2r75_1 Cell division protein F 99.5 1.7E-15 6E-20 140.3 0.1 152 9-195 104-311 (338)
8 2vxy_A FTSZ, cell division pro 99.5 2.7E-15 9.2E-20 141.0 0.9 153 8-193 107-312 (382)
9 1w5f_A Cell division protein F 99.5 1.1E-15 3.7E-20 142.4 -2.3 154 7-193 116-325 (353)
10 1ofu_A FTSZ, cell division pro 99.5 6.2E-15 2.1E-19 135.7 0.9 154 7-193 106-313 (320)
11 2vaw_A FTSZ, cell division pro 99.4 1.1E-14 3.7E-19 137.3 0.8 153 9-194 108-314 (394)
12 1rq2_A Cell division protein F 99.4 4.6E-15 1.6E-19 139.4 -3.7 154 7-194 106-313 (382)
13 4dxd_A Cell division protein F 98.8 3.9E-10 1.3E-14 105.7 -0.2 83 7-97 112-227 (396)
14 3v3t_A Cell division GTPase FT 98.8 1.6E-09 5.4E-14 100.6 2.2 80 7-90 99-203 (360)
15 3m89_A FTSZ/tubulin-related pr 98.7 2.3E-09 7.8E-14 101.3 1.2 85 17-101 164-301 (427)
16 2e4h_B Tubulin alpha-ubiquitou 97.1 0.00037 1.3E-08 43.5 3.5 35 230-264 1-36 (36)
17 4ei7_A Plasmid replication pro 93.0 0.14 4.7E-06 47.9 6.1 56 17-74 128-193 (389)
18 3pu6_A Uncharacterized protein 57.6 16 0.00053 29.3 5.2 59 1-65 3-63 (157)
19 1pq1_B BCL2-like protein 11; B 39.1 18 0.00062 21.4 2.0 26 197-222 7-32 (33)
20 1cfz_A Hydrogenase 2 maturatio 37.8 29 0.00099 27.7 3.8 61 1-65 1-62 (162)
21 3hr5_R M1prime-derived peptide 29.8 16 0.00054 21.5 0.7 14 88-101 22-35 (35)
22 2e85_A Hydrogenase 3 maturatio 26.3 79 0.0027 25.1 4.6 60 1-65 4-65 (159)
23 2ket_A Cathelicidin-6; antimic 22.7 54 0.0018 18.1 1.9 15 202-216 3-17 (27)
24 3f1i_H Hepatocyte growth facto 22.5 63 0.0021 24.0 2.9 59 189-249 27-91 (98)
No 1
>3ryc_A Tubulin alpha chain; alpha-tubulin, beta-tubulin, GTPase, microtubule, tubulin, cell cycle; HET: GTP GDP; 2.10A {Ovis aries} PDB: 3ryf_A* 3ryh_A* 3ryi_A* 3ut5_A* 4eb6_A* 4f61_A* 4f6r_A* 3hke_A* 3hkc_A* 3hkd_A* 3hkb_A* 3n2g_A* 3n2k_A* 1sa0_A* 1sa1_A* 3edl_F* 1ffx_A* 1ia0_A* 2hxf_A* 2hxh_A* ...
Probab=100.00 E-value=3.2e-62 Score=467.99 Aligned_cols=244 Identities=48% Similarity=0.696 Sum_probs=212.7
Q ss_pred ccccccccccchhHhHHHHHHHHhCcceecEEEEEecCCC--------Ch-hHHhHHhhcCCeeEEeccHHHHHHHH---
Q psy6839 7 GLAFGLYFTFFIPLLYFTFLREFFGTTLFQSHTIYHINNL--------NQ-DTLAQIEENSNGTSILAEDEFYDAVE--- 74 (264)
Q Consensus 7 ~~~~~~~~~~~~~~llle~Lrd~Yp~~~~~~~sV~P~~~~--------Ns-Ltl~~L~e~sD~v~~~dNdaL~~i~~--- 74 (264)
|=+||+-|+ ++|+|+|+|+|||+.+++++|||++.. |+ ||+++|.++||+++++||+||++||.
T Consensus 142 gGGTGSG~g----s~lle~L~~ey~kk~~~~~~v~P~~~~s~~vvepYNa~Lsl~~L~e~sD~~~~idNeaL~~ic~~~l 217 (451)
T 3ryc_A 142 GGGTGSGFT----SLLMERLSVDYGKKSKLEFSIYPAPQVSTAVVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNL 217 (451)
T ss_dssp SSHHHHHHH----HHHHHHHHHHTTTCEEEEEEEECCTTTCCCTTHHHHHHHHHHHHGGGCSEEEEEEHHHHHHHHHHHH
T ss_pred CCCCCccHH----HHHHHHHHHhcCcceEEEEEEecCCCcccccceehHHHHHHHHHHhcccceeEeccHHHHHHHHHhc
Confidence 445666666 999999999999999999999998743 99 99999999999999999999999995
Q ss_pred ------------------hcCCCC----cccCCChhhccccCCCCCCcc---c-----------cc---------ccccc
Q psy6839 75 ------------------SGSQNS----EDLGSSRKSSIVSLIPAPSSA---T-----------AN---------HRLWP 109 (264)
Q Consensus 75 ------------------s~~t~s----~~ln~~l~~l~~nLvP~P~lh---t-----------~~---------~ql~~ 109 (264)
|++|++ |.+|.||+++.+||||+|++| + .+ +++|+
T Consensus 218 ~i~~p~y~~lN~lIa~~~s~iT~slRf~G~lN~Dl~~l~tnLVP~PrlHF~~~s~aPl~s~~~~~~~~~sv~elt~~~f~ 297 (451)
T 3ryc_A 218 DIERPTYTNLNRLISQIVSSITASLRFDGALNVDLTEFQTNLVPYPRIHFPLATYAPVISAEKAYHEQLSVAEITNACFE 297 (451)
T ss_dssp CCSSCCHHHHHHHHHHHHHHHHHHHHTTCSSSCSHHHHHHHHCSSSSCCCCEEEEECCCBSSSCCCCCCCHHHHHHHTTC
T ss_pred cCCCCCchhhHHHHHhcccccccccccCcccccCHHHHhhccCCCCceeeeccccCccccccccccccCCHHHHHHHHhc
Confidence 344444 999999999999999999999 1 01 56777
Q ss_pred cC------CCCCCcccchhhccccCcccCC-CC-ccccccCccccccccCCCCCccccccccccceeeecCCCCCCCCCc
Q psy6839 110 EE------ENSNGTSILAEDEFYDAVESGS-QN-SEDLGSSRKSSIVSLIPAPSSATANHRLWPEVGINYQPPTVVPGGD 181 (264)
Q Consensus 110 ~~------~~~~~~~Ls~~~i~RG~~~~~~-~~-~~~i~~~~~~~fv~W~p~~~~~~~~~~~~~kv~l~~~~p~~~~~~~ 181 (264)
++ +|+.|||||+++++||++++++ .+ +.+++.|+.+.|++|+|+++ |+++|++||...|+.+
T Consensus 298 ~~n~m~~~dp~~gky~a~~~~~RG~v~~~dv~~~i~~ik~k~~~~Fv~W~p~~~----------kv~i~~~pP~~~p~~~ 367 (451)
T 3ryc_A 298 PANQMVKCDPRHGKYMACCLLYRGDVVPKDVNAAIATIKTKRSIQFVDWCPTGF----------KVGINYQPPTVVPGGD 367 (451)
T ss_dssp GGGBSSCCCGGGSCEEEEEEEEEESCCHHHHHHHHHHHHHHCCCCBCTTSCEEE----------EEEEECSCCCCCTTSS
T ss_pred cccceEecCCCCCchheehhhcccCCCHHHHHHHHHHHhhcCCcceEEEccCce----------eeeeeccCCccCCCcc
Confidence 65 7889999999999999999998 66 88888889999999999999 8999999999999999
Q ss_pred ccchhceeeeecCchHHHHHHHHhHHHHHHHhhhhcceeccccCCCChhhHHHHHHHHHHHHHHHHHHccCCccC-CCCC
Q psy6839 182 LAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEEVGMDSVEG-EGEG 260 (264)
Q Consensus 182 ~~~~~~S~~~LsNsTsI~~~l~~i~~~f~~mf~krAfLH~Y~~eGmee~eF~eA~~~le~li~eY~~~~~~~~~~-~~~~ 260 (264)
+++.+++++||+|+|+|.+.|+++.+||++||+||||||||++|||||+||.||++++++|++||++++.+.+++ +.++
T Consensus 368 la~~~~s~~~lsNsTaI~~~f~rl~~kFd~m~~krAFvHwY~~eGmee~eF~EA~e~l~~L~~eY~~~~~~~~~~~~~~~ 447 (451)
T 3ryc_A 368 LAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDMAALEKDYEEVGVDSVEGEGEEE 447 (451)
T ss_dssp BCCCSEEEEEEEEEGGGHHHHHHHHHHHHHHHTTTTTTHHHHTTTCCHHHHHHHHHHHHHHHHHHHHHHCC---------
T ss_pred ccccceeeEEecCchHHHHHHHHHHHHHHHHhhcceeHhhhcCCccchhhHHHHHHHHHHHHHHHHHHhcCCCccccccc
Confidence 999999999999999999999999999999999999999999999999999999999999999999999887753 3477
Q ss_pred ccCC
Q psy6839 261 AEEY 264 (264)
Q Consensus 261 ~~~~ 264 (264)
+|||
T Consensus 448 ~~~~ 451 (451)
T 3ryc_A 448 GEEY 451 (451)
T ss_dssp ----
T ss_pred ccCC
Confidence 7776
No 2
>3ryc_B Tubulin beta chain; alpha-tubulin, beta-tubulin, GTPase, microtubule, tubulin, cell cycle; HET: GTP GDP; 2.10A {Ovis aries} PDB: 3ryf_B* 3ryh_B* 3ryi_B* 3ut5_B* 4eb6_B* 4f6r_B* 4f61_B* 3hke_B* 3du7_B* 3e22_B* 3hkc_B* 3hkd_B* 3hkb_B* 3n2g_B* 3n2k_B* 1z2b_B* 2xrp_A* 4aqv_B* 4aqw_B* 4atu_A* ...
Probab=100.00 E-value=2.5e-60 Score=454.27 Aligned_cols=228 Identities=22% Similarity=0.422 Sum_probs=205.1
Q ss_pred ccccccccccchhHhHHHHHHHHhCcceecEEEEEecCCC--------Ch-hHHhHHhhcCCeeEEeccHHHHHHHH---
Q psy6839 7 GLAFGLYFTFFIPLLYFTFLREFFGTTLFQSHTIYHINNL--------NQ-DTLAQIEENSNGTSILAEDEFYDAVE--- 74 (264)
Q Consensus 7 ~~~~~~~~~~~~~~llle~Lrd~Yp~~~~~~~sV~P~~~~--------Ns-Ltl~~L~e~sD~v~~~dNdaL~~i~~--- 74 (264)
|=+||+-|+ ++|+|+|+|+|||+.+++++|||++.. |+ ||+++|.|+||+++++||+||++||.
T Consensus 140 gGGTGSG~g----s~lle~L~~ey~kk~~~~~sV~Psp~~s~~vvepYNa~Lsl~~L~e~sD~~~~iDNeaL~~ic~~~l 215 (445)
T 3ryc_B 140 GGGTGSGMG----TLLISKIREEYPDRIMNTFSVMPSPKVSDTVVEPYNATLSVHQLVENTDETYSIDNEALYDICFRTL 215 (445)
T ss_dssp SSSHHHHHH----HHHHHHHHHHCTTSEEEEEEEECCGGGCSCTTHHHHHHHHHHHHHHHCSEEEEEEHHHHHHHHHHTS
T ss_pred CCCCCCcHH----HHHHHHHHHHcCccccceEEEEeCCccccccccchhhhhhHhhhhcccceeEeecchhHHHHHHhcc
Confidence 334566555 999999999999999999999998642 99 99999999999999999999999996
Q ss_pred ------------------hcCCCC----cccCCChhhccccCCCCCCcc---c-----------cc---------ccccc
Q psy6839 75 ------------------SGSQNS----EDLGSSRKSSIVSLIPAPSSA---T-----------AN---------HRLWP 109 (264)
Q Consensus 75 ------------------s~~t~s----~~ln~~l~~l~~nLvP~P~lh---t-----------~~---------~ql~~ 109 (264)
|++|.+ |.+|.||+++.+||||+|++| + .+ +|||+
T Consensus 216 ~i~~p~y~~lN~lIa~~~s~iT~slRf~G~lN~Dl~~l~tnLVP~PrlhF~~~s~aP~~s~~~~~~~~~sv~elt~~~f~ 295 (445)
T 3ryc_B 216 KLTTPTYGDLNHLVSATMSGVTTCLRFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSRGSQQYRALTVPELTQQMFD 295 (445)
T ss_dssp CCSSCCHHHHHHHHHHHHHHHHHHHHSCCSSSCSHHHHHHHHCSSTTCCEEEEEEESCCCTTCCCCCCCCHHHHHHHTTS
T ss_pred CCCCCcchhhHHHHHhcchhhccccccCcccccCHHHHhhcccCCCceeeeccccCcccccchhhhccCCHHHHHHHHHh
Confidence 344444 999999999999999999999 1 11 67777
Q ss_pred cC------CCCCCcccchhhccccCcccCC-CC-ccccccCccccccccCCCCCccccccccccceeeecCCCCCCCCCc
Q psy6839 110 EE------ENSNGTSILAEDEFYDAVESGS-QN-SEDLGSSRKSSIVSLIPAPSSATANHRLWPEVGINYQPPTVVPGGD 181 (264)
Q Consensus 110 ~~------~~~~~~~Ls~~~i~RG~~~~~~-~~-~~~i~~~~~~~fv~W~p~~~~~~~~~~~~~kv~l~~~~p~~~~~~~ 181 (264)
++ +|+.|||||+++++||++++++ .+ +.+++.|+.+.|++|+|.++ |+++|++||..
T Consensus 296 ~~n~m~~~dp~~gky~a~~~~~RG~v~~kdv~~~i~~ik~k~~~~Fv~W~p~~~----------k~~i~~~pp~~----- 360 (445)
T 3ryc_B 296 SKNMMAACDPRHGRYLTVATIFRGRMSMKEVDEQMLNIQNKNSSYFVEWIPNNV----------KTAVCDIPPRG----- 360 (445)
T ss_dssp GGGBSSSCCGGGSCEEEEEEEEEESCCHHHHHHHHHHHHHHTGGGBCTTSTTCE----------EEEEESSCCTT-----
T ss_pred hcCCeeecCCCCCcceeeeeeeecCCChHHHHHHHHHHHhhCcccCcccCCCce----------eeeeeccCCcc-----
Confidence 75 7889999999999999999998 66 88888889999999999999 89999999863
Q ss_pred ccchhceeeeecCchHHHHHHHHhHHHHHHHhhhhcceeccccCCCChhhHHHHHHHHHHHHHHHHHHccCCccC
Q psy6839 182 LAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEEVGMDSVEG 256 (264)
Q Consensus 182 ~~~~~~S~~~LsNsTsI~~~l~~i~~~f~~mf~krAfLH~Y~~eGmee~eF~eA~~~le~li~eY~~~~~~~~~~ 256 (264)
.++|++||+|+|+|.++|+++.+||++||+||||||||++|||||+||.||++++++|++||++++....++
T Consensus 361 ---~~~s~~~lsNsTaI~~~~~rl~~kFd~m~~krAFvHwY~~eGmee~eF~EA~e~l~~L~~eY~~~~~~~~~~ 432 (445)
T 3ryc_B 361 ---LKMSSTFIGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQDATADE 432 (445)
T ss_dssp ---CSEEEEEEEEEGGGHHHHHHHHHHHHHHHTTTTTTHHHHTTTCCHHHHHHHHHHHHHHHHHHHHHHHCCTTC
T ss_pred ---cceeeeeecCcHHHHHHHHHHHHHHHhhhhcccchhhhhccCCcHHHHHHHHHHHHHHHHHHHHHHhccCCc
Confidence 678999999999999999999999999999999999999999999999999999999999999998776644
No 3
>3cb2_A Gamma-1-tubulin, tubulin gamma-1 chain; lattice, microtubule, nucleation, GTPase, lateral interaction, structural protein, hydrolase; HET: GDP; 2.30A {Homo sapiens} PDB: 1z5v_A* 1z5w_A*
Probab=100.00 E-value=1.1e-53 Score=412.23 Aligned_cols=226 Identities=18% Similarity=0.258 Sum_probs=199.1
Q ss_pred cchhHhHHHHHHHHhCcceecEEEEEecCC----C-----Ch-hHHhHHhhcCCeeEEeccHHHHHHHH-----------
Q psy6839 16 FFIPLLYFTFLREFFGTTLFQSHTIYHINN----L-----NQ-DTLAQIEENSNGTSILAEDEFYDAVE----------- 74 (264)
Q Consensus 16 ~~~~~llle~Lrd~Yp~~~~~~~sV~P~~~----~-----Ns-Ltl~~L~e~sD~v~~~dNdaL~~i~~----------- 74 (264)
-+++++|+|.|||+||++.+++++|+|++. + |+ |++++|.+++|+++++||++|++||.
T Consensus 147 SG~~s~l~e~l~dey~~k~~lt~~V~P~~~e~se~vv~~yNa~lsl~~L~e~sD~~i~idNeaL~~i~~~~l~i~~p~f~ 226 (475)
T 3cb2_A 147 SGLGSYLLERLNDRYPKKLVQTYSVFPNQDEMSDVVVQPYNSLLTLKRLTQNADCLVVLDNTALNRIATDRLHIQNPSFS 226 (475)
T ss_dssp HHHHHHHHHHHHHHSTTSEEEEEEEECCTTSCCSCTTHHHHHHHHHHHHHHSCSEEEEEEHHHHHHHHHHTSCCSSCCHH
T ss_pred cChHHHHHHHHHHHcCCCceEEEEEECCccccccceeehhHhHHHHHHHHhhCCEEEEeccHHHHHHHhhcCCCCcchHH
Confidence 345599999999999999999999999874 2 99 99999999999999999999999996
Q ss_pred ----------hcCCCC----cccCCChhhccccCCCCCCcc---c---------c---c---------ccccccC-----
Q psy6839 75 ----------SGSQNS----EDLGSSRKSSIVSLIPAPSSA---T---------A---N---------HRLWPEE----- 111 (264)
Q Consensus 75 ----------s~~t~s----~~ln~~l~~l~~nLvP~P~lh---t---------~---~---------~ql~~~~----- 111 (264)
+++|.+ |.+|.|++++.++|||+|++| + + + ++||+++
T Consensus 227 ~~N~lia~~vs~iT~~lr~pG~lN~Dl~d~~tnLvP~PrlhFl~~s~aP~~s~~~~~~~~~~sv~~l~~~~f~~~n~m~~ 306 (475)
T 3cb2_A 227 QINQLVSTIMSASTTTLRYPGYMNNDLIGLIASLIPTPRLHFLMTGYTPLTTDQSVASVRKTTVLDVMRRLLQPKNVMVS 306 (475)
T ss_dssp HHHHHHHHHHHHHTTTTSSSSCTTCSHHHHHHHHCSSTTCCEEEEEEECCC------CCSCCCHHHHHHHTTSGGGBSSC
T ss_pred HHHHHHhhhccccccccccCCcccchhhhhcceeecccceeEeecccccccccccccccccCCHHHHHHHHhccccceEe
Confidence 344444 999999999999999999999 1 2 1 5667765
Q ss_pred -CCC---CCcccchhhccccCcccCC-CC-ccccccCccccccccCCCCCccccccccccceeeecCCCCCCCCCcccch
Q psy6839 112 -ENS---NGTSILAEDEFYDAVESGS-QN-SEDLGSSRKSSIVSLIPAPSSATANHRLWPEVGINYQPPTVVPGGDLAKV 185 (264)
Q Consensus 112 -~~~---~~~~Ls~~~i~RG~~~~~~-~~-~~~i~~~~~~~fv~W~p~~~~~~~~~~~~~kv~l~~~~p~~~~~~~~~~~ 185 (264)
+++ .+||||+++++||++++++ .+ +.+++.|+.+.|++|+|+++ |+++|+++|...+ +.
T Consensus 307 ~dp~~~~~gkyla~~~~~RG~v~~~dv~~~i~~ik~k~~~~fv~W~p~~~----------k~~i~~~~p~~~~-----~~ 371 (475)
T 3cb2_A 307 TGRDRQTNHCYIAILNIIQGEVDPTQVHKSLQRIRERKLANFIPWGPASI----------QVALSRKSPYLPS-----AH 371 (475)
T ss_dssp CCCC--CCCCEEEEEEEEESSCCHHHHHHHHHHHHHTTCSCBCTTSCCCE----------EEEEECCCCC----------
T ss_pred cCcccccccchhhhHHhhcCCCCHHHHHHHHHHhhcccCCccceecCCCc----------eeeeeccCCccCC-----Cc
Confidence 666 8999999999999999888 66 78888888999999999999 8999999997654 46
Q ss_pred hceeeeecCchHHHHHHHHhHHHHHHHhhhhcceeccccCCCCh---hhHHHHHHHHHHHHHHHHHHccCCccC
Q psy6839 186 QRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEE---GEFSEAREDLAALEKDYEEVGMDSVEG 256 (264)
Q Consensus 186 ~~S~~~LsNsTsI~~~l~~i~~~f~~mf~krAfLH~Y~~eGmee---~eF~eA~~~le~li~eY~~~~~~~~~~ 256 (264)
+++++||+|+|+|.++|+++.+||++||+||||||||++||||| +||.||+++|++|+++|++++++.+.+
T Consensus 372 ~~s~~~lsN~TaI~~~f~ri~~kfd~m~~rrAflHwY~~eGm~e~~~~eF~EA~~~l~~li~eY~~~~~~~~~~ 445 (475)
T 3cb2_A 372 RVSGLMMANHTSISSLFERTCRQYDKLRKREAFLEQFRKEDMFKDNFDEMDTSREIVQQLIDEYHAATRPDYIS 445 (475)
T ss_dssp CCEEEEEEEEGGGHHHHHHHHHHHHHHHHTTCSCHHHHTSGGGSSCCHHHHHHHHHHHHHHHHHHHTTSGGGSC
T ss_pred ceEEEEecCChHHHHHHHHHHHHHHHHhhcccceeeecccCccccchhHHHHHHHHHHHHHHHHHHHhhccccC
Confidence 78999999999999999999999999999999999999999987 999999999999999999998666644
No 4
>2btq_B Tubulin btubb; structural protein, cytoskeletal protein/complex, bacterial tubulin, cytoskeleton, polymerization, verrucomicrobia; HET: GDP; 3.2A {Prosthecobacter dejongeii}
Probab=100.00 E-value=1.6e-52 Score=399.96 Aligned_cols=214 Identities=21% Similarity=0.375 Sum_probs=187.8
Q ss_pred cchhHhHHHHHHHHhCcceecEEEEEecCC---C-----Ch-hHHhHHhhcCCeeEEeccHHHHHHHH------------
Q psy6839 16 FFIPLLYFTFLREFFGTTLFQSHTIYHINN---L-----NQ-DTLAQIEENSNGTSILAEDEFYDAVE------------ 74 (264)
Q Consensus 16 ~~~~~llle~Lrd~Yp~~~~~~~sV~P~~~---~-----Ns-Ltl~~L~e~sD~v~~~dNdaL~~i~~------------ 74 (264)
-+++++|+|.|||+||++.+++++|+|++. + |+ |++++|.+++|+++++||++|++||.
T Consensus 146 SG~~~~l~e~l~~~y~~~~~lt~~V~p~p~~~e~~~~~yNa~lsl~~L~e~~D~~i~idN~al~~i~~~~l~~~~~f~~~ 225 (426)
T 2btq_B 146 SGLGSLILERLRQAYPKKRIFTFSVVPSPLISDSAVEPYNAILTLQRILDNADGAVLLDNEALFRIAKAKLNRSPNYMDL 225 (426)
T ss_dssp THHHHHHHHHHHTTCTTSEEEEEEEECCGGGCCCTTHHHHHHHHHHHHHHHCSEEEEEEHHHHHHHHHHHSSSCCCHHHH
T ss_pred ccHHHHHHHHHHHHcCcCceEEEEEecCCccccchhhHHHHHHHHHHHHHhCCcceeeccHHHHHHHhccCCCCcHHHHH
Confidence 345599999999999999999999999874 2 99 99999999999999999999999996
Q ss_pred --------hcCCCC----cccCCChhhccccCCCCCCcc---c-----------cc---------ccccccC------CC
Q psy6839 75 --------SGSQNS----EDLGSSRKSSIVSLIPAPSSA---T-----------AN---------HRLWPEE------EN 113 (264)
Q Consensus 75 --------s~~t~s----~~ln~~l~~l~~nLvP~P~lh---t-----------~~---------~ql~~~~------~~ 113 (264)
+++|.+ |.+|.|++++.++|||+|++| + .+ +++|+++ ++
T Consensus 226 N~lia~~v~~it~~lr~~g~lN~D~~d~~t~lvP~P~~hf~~~~~aP~~~~~~~~~~~~sv~~l~~~~f~~~n~m~~~dp 305 (426)
T 2btq_B 226 NNIIALIVSSVTASLRFPGKLNTDLSEFVTNLVPFPGNHFLTASFAPMRGAGQEGQVRTNFPDLARETFAQDNFTAAIDW 305 (426)
T ss_dssp HHHHHHHHHHHHHHHHSSCSSSCSHHHHHHHHCSSTTCCEEEEECSCC-----------CCHHHHHHHTCGGGBSSCCCT
T ss_pred HHHHHhhhcchhhhccCCCcccCCHHHHHHHHhhCCCCceeeccccccccchhhccccCCHHHHhhhhcCccceeEecCC
Confidence 233333 999999999999999999999 1 01 5666654 68
Q ss_pred CCCcccchhhccccCcccCC-CC-ccccccCccccccccCC--CCCccccccccccceeeecCCCCCCCCCcccchhcee
Q psy6839 114 SNGTSILAEDEFYDAVESGS-QN-SEDLGSSRKSSIVSLIP--APSSATANHRLWPEVGINYQPPTVVPGGDLAKVQRAV 189 (264)
Q Consensus 114 ~~~~~Ls~~~i~RG~~~~~~-~~-~~~i~~~~~~~fv~W~p--~~~~~~~~~~~~~kv~l~~~~p~~~~~~~~~~~~~S~ 189 (264)
+.++|||+++++||++++++ .+ +..+ |+.+.|++|+| +++ |+++|++||.. .++++
T Consensus 306 ~~g~yla~~~i~rG~v~~~~v~~~~~~i--k~~~~fv~W~p~~~~~----------k~~i~~~~p~~--------~~~s~ 365 (426)
T 2btq_B 306 QQGVYLAASALFRGDVKAKDVDENMATI--RKSLNYASYMPASGGL----------KLGYAETAPEG--------FASSG 365 (426)
T ss_dssp TTCCEEEEEEEEECC----CTTTTHHHH--HTTSCBCTTSCSSCSE----------EEEEESCCCTT--------CSSBC
T ss_pred CCchHHHHHHHHcCCCCHHHHHHHHHHH--hcCCCCcccCCCCCce----------eeeeeccCCCC--------Cccee
Confidence 89999999999999998888 55 6666 67789999999 998 89999999853 56799
Q ss_pred eeecCchHHHHHHHHhHHHHHHHhhhhcceeccccCCCChhhHHHHHHHHHHHHHHHHHH
Q psy6839 190 CMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEEV 249 (264)
Q Consensus 190 ~~LsNsTsI~~~l~~i~~~f~~mf~krAfLH~Y~~eGmee~eF~eA~~~le~li~eY~~~ 249 (264)
+||+|+|+|.++|+++.+||++||+||||||||++|||||+||.||+++|++|++||+++
T Consensus 366 ~~lsNstaI~~~~~~~~~~f~~m~~rrAflh~Y~~eGmee~eF~ea~~~l~~l~~eY~~~ 425 (426)
T 2btq_B 366 LALVNHTGIAAVFERLIAQFDIMFDNHAYTHWYENAGVSRDMMAKARNQIATLAQSYRDA 425 (426)
T ss_dssp CEEEEEGGGHHHHHHHHHHHHHHHHTTSSHHHHHTTTCCHHHHHHHHHHHHHHHHHHHHH
T ss_pred EEecCChHHHHHHHHHHHHHHHHhhcccchhhhccCCccHHHHHHHHHHHHHHHHHHHhc
Confidence 999999999999999999999999999999999999999999999999999999999987
No 5
>2bto_A Tubulin btuba; bacterial tubulin, polymerization, cytoskeleton, protein COM cytoskeletal protein; HET: GTP; 2.5A {Prosthecobacter dejongeii} SCOP: c.32.1.1 d.79.2.1 PDB: 2btq_A*
Probab=100.00 E-value=5e-50 Score=386.77 Aligned_cols=219 Identities=20% Similarity=0.337 Sum_probs=184.3
Q ss_pred cchhHhHHHHHHHHhCcceecEEEEEecCCC--------Ch-hHHhHHhhcCCeeEEeccHHHHHHHH------------
Q psy6839 16 FFIPLLYFTFLREFFGTTLFQSHTIYHINNL--------NQ-DTLAQIEENSNGTSILAEDEFYDAVE------------ 74 (264)
Q Consensus 16 ~~~~~llle~Lrd~Yp~~~~~~~sV~P~~~~--------Ns-Ltl~~L~e~sD~v~~~dNdaL~~i~~------------ 74 (264)
-+++++|+|.|||+||++.+++++|||++.. |+ |++++|.+++|+++++||++|++||.
T Consensus 149 SG~~~~l~e~l~e~y~~~~ilt~~V~P~~~~~e~~v~~yNa~lsl~~L~e~~D~~i~idNeaL~~i~~~~l~i~~~~f~~ 228 (473)
T 2bto_A 149 SGFGALLIESLKEKYGEIPVLSCAVLPSPQVSSVVTEPYNTVFALNTLRRSADACLIFDNEALFDLAHRKWNIESPTVDD 228 (473)
T ss_dssp HHHHHHHHHHHHHHTCSSCEEEEEEECCCCSSCEESHHHHHHHHHHHHHHTCSEEEEEEHHHHHHHHHHTSCCSSCCHHH
T ss_pred cchHHHHHHHHHHHcCCCceEEEEEecCCccccchhhHHHHHHHHHHHHhhCCeEEEeccHHHHHHhccccccCcchHHH
Confidence 3555999999999999999999999998732 99 99999999999999999999999997
Q ss_pred ---------hcCCCC----cccCCC--hhhccccCCCCCCcc---c-----------cc---------ccccccC-----
Q psy6839 75 ---------SGSQNS----EDLGSS--RKSSIVSLIPAPSSA---T-----------AN---------HRLWPEE----- 111 (264)
Q Consensus 75 ---------s~~t~s----~~ln~~--l~~l~~nLvP~P~lh---t-----------~~---------~ql~~~~----- 111 (264)
+++|.+ |.+|.| ++++.++|||+|++| + .+ +++|+++
T Consensus 229 ~N~lia~~v~~it~~lr~~g~lN~D~~l~d~~t~LvP~Prlhf~~~~~aPl~s~~~~~~~~~sv~~l~~~~f~~~n~m~~ 308 (473)
T 2bto_A 229 LNLLITEALAGITASMRFSGFLTVEISLRELLTNLVPQPSLHFLMCAFAPLTPPDRSKFEELGIEEMIKSLFDNGSVFAA 308 (473)
T ss_dssp HHHHHHHHHHHHHHHHHC------CCCHHHHHHHHCSSTTCCEEEEEEECCCCCC-----CCCHHHHHHHHTSGGGBSSS
T ss_pred HHHHHhhhcccchhhcccCCcccCCccHHhhhhheeecCCcceeeeccccccccchhccccCCHHHHHhhhcccccceee
Confidence 222322 999999 999999999999999 1 01 5566654
Q ss_pred -CCCCCcccchhhccccCcccCCC-C--ccccccCccccccccCCCCCccccccccccceeeecCCCCCCCCCcccchhc
Q psy6839 112 -ENSNGTSILAEDEFYDAVESGSQ-N--SEDLGSSRKSSIVSLIPAPSSATANHRLWPEVGINYQPPTVVPGGDLAKVQR 187 (264)
Q Consensus 112 -~~~~~~~Ls~~~i~RG~~~~~~~-~--~~~i~~~~~~~fv~W~p~~~~~~~~~~~~~kv~l~~~~p~~~~~~~~~~~~~ 187 (264)
+++.++||++++++||++++++. . +..++.++.+.| |+|.++ |+++|++||. +.++
T Consensus 309 ~dp~~gkyla~~~i~RG~v~~~dv~~~~i~~ik~k~~~~F--W~p~~~----------kv~i~~~pp~--------g~~~ 368 (473)
T 2bto_A 309 CSPMEGRFLSTAVLYRGIMEDKPLADAALAAMREKLPLTY--WIPTAF----------KIGYVEQPGI--------SHRK 368 (473)
T ss_dssp SCGGGSCEEEEEEEEEEC----CCHHHHHHHHHTTSCBCS--SSCCCE----------EEEEESSCCS--------SCSE
T ss_pred cCCCCchHHHHHHhhcCCCChHHhhHHHHHHHHhhcccce--ecCCcc----------eecccccCCc--------Ccce
Confidence 67789999999999999887773 3 667888888999 999999 8999999986 3678
Q ss_pred eeeeecCchHHHHHHHHhHHHHHHHhhhhcceeccccCCCChhhHHHHHHHHHHHHHHHHHHccCCc
Q psy6839 188 AVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEEVGMDSV 254 (264)
Q Consensus 188 S~~~LsNsTsI~~~l~~i~~~f~~mf~krAfLH~Y~~eGmee~eF~eA~~~le~li~eY~~~~~~~~ 254 (264)
++++|+|+|+|.+.|+++.+||++||+||||||||++|||||+||.||+++|++|+++|++++.+..
T Consensus 369 s~~~lsNsTaI~~~~~~l~~kf~~m~~rrAflH~Y~~eGmee~eF~EA~e~l~~l~~eY~~~~~~~~ 435 (473)
T 2bto_A 369 SMVLLANNTEIARVLDRICHNFDKLWQRKAFANWYLNEGMSEEQINVLRASAQELVQSYQVAEESGA 435 (473)
T ss_dssp EEEEEEEETTHHHHHHHHHHHHHHHHTTTTTHHHHHTTTCCHHHHHHHHHHHHHHHHHHHHHTC---
T ss_pred eEEEecCCchHHHHHHHHHHHHHHHhhhcchhHHhhccCCcHHHHHHHHHHHHHHHHHHHHHhcccc
Confidence 9999999999999999999999999999999999999999999999999999999999999976544
No 6
>2vap_A FTSZ, cell division protein FTSZ homolog 1; polymerization, tubulin homolog, GTPase, septation, cell cycle, GTP-binding; HET: GDP; 1.70A {Methanocaldococcus jannaschii} SCOP: c.32.1.1 d.79.2.1 PDB: 1w59_A 1w58_1* 1w5a_A* 1w5b_A* 1fsz_A* 1w5e_A*
Probab=99.50 E-value=1e-15 Score=142.99 Aligned_cols=151 Identities=9% Similarity=0.059 Sum_probs=110.8
Q ss_pred ccccccccchhHhHHHHHHHHhCcceecEEEEEecCCC--------Ch-hHHhHHhhcCCeeEEeccHHHHHHHH-----
Q psy6839 9 AFGLYFTFFIPLLYFTFLREFFGTTLFQSHTIYHINNL--------NQ-DTLAQIEENSNGTSILAEDEFYDAVE----- 74 (264)
Q Consensus 9 ~~~~~~~~~~~~llle~Lrd~Yp~~~~~~~sV~P~~~~--------Ns-Ltl~~L~e~sD~v~~~dNdaL~~i~~----- 74 (264)
+||+-++ ++|+|.+|| | .+++++|+|.+.. |+ |++++|.+++|+++++|||+|++||.
T Consensus 134 GTGSG~a----p~lae~lke-~---~~lt~~Vv~~Pf~~eg~~~~ynA~~~l~~L~e~~D~~ividNeaL~~i~~~l~i~ 205 (364)
T 2vap_A 134 GTGTGSA----PVVAEISKK-I---GALTVAVVTLPFVMEGKVRMKNAMEGLERLKQHTDTLVVIPNEKLFEIVPNMPLK 205 (364)
T ss_dssp SHHHHHH----HHHHHHHHH-T---TCEEEEEEEECCGGGCHHHHHHHHHHHHHHHTTCSEEEEEEGGGHHHHSTTCCHH
T ss_pred CCCCChH----HHHHHHHHH-h---CCcEEEEeCCCccccchhHHHHHHHHHHHHHHhCCeEEEEcHHHHHHHHccCChh
Confidence 4555555 999999998 8 3667888877654 99 99999999999999999999999984
Q ss_pred --------------hcCC----CCcccCCChhhccccCCCCCCccc--------------cccccccc----CCCCCCcc
Q psy6839 75 --------------SGSQ----NSEDLGSSRKSSIVSLIPAPSSAT--------------ANHRLWPE----EENSNGTS 118 (264)
Q Consensus 75 --------------s~~t----~s~~ln~~l~~l~~nLvP~P~lht--------------~~~ql~~~----~~~~~~~~ 118 (264)
+++| ..|.+|.|++++.++|+| |++|. +.++++.+ .+++.++|
T Consensus 206 ~af~~~N~li~~~v~~it~~ir~pG~iNvD~~dv~t~L~~-~g~a~~g~g~a~g~~r~~ea~~~a~~~~ll~~d~~~ak~ 284 (364)
T 2vap_A 206 LAFKVADEVLINAVKGLVELITKDGLINVDFADVKAVMNN-GGLAMIGIGESDSEKRAKEAVSMALNSPLLDVDIDGATG 284 (364)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHSCCSBCCCHHHHHHHHTT-CEEEEEEEEEECSTTHHHHHHHHHHTCTTCCSCGGGCCE
T ss_pred hhhhhHHHHHHHHHhhhhHHhhcCCceeccHHHHHHhccC-CCeeEEEEEecCCcchHHHHHHHHHhCcCcCcChhhcce
Confidence 2233 239999999999999999 99991 11333322 25778899
Q ss_pred cchhhccccCcccCC-CC-ccccccCccccccccCC-CCCccccccccccceeeecCCCCCCCCCcccchhceeeeec
Q psy6839 119 ILAEDEFYDAVESGS-QN-SEDLGSSRKSSIVSLIP-APSSATANHRLWPEVGINYQPPTVVPGGDLAKVQRAVCMLS 193 (264)
Q Consensus 119 Ls~~~i~RG~~~~~~-~~-~~~i~~~~~~~fv~W~p-~~~~~~~~~~~~~kv~l~~~~p~~~~~~~~~~~~~S~~~Ls 193 (264)
+.+....||+..+++ ++ +..++.+.. | ..+ +.+.|..++. +.+.++++++
T Consensus 285 ~l~~i~~~~dl~~~ev~~a~~~I~~~~~-------~~a~i----------i~G~~~~~~~--------~~~v~VtvIa 337 (364)
T 2vap_A 285 ALIHVMGPEDLTLEEAREVVATVSSRLD-------PNATI----------IWGATIDENL--------ENTVRVLLVI 337 (364)
T ss_dssp EEEEEEECTTCCHHHHHHHHHHHHHHSC-------TTCEE----------EEEEEECTTC--------SSCEEEEEEE
T ss_pred EEEEEEeCCCCCHHHHHHHHHHHHHhcC-------CCCCE----------EEEEEecCCC--------CCeEEEEEEE
Confidence 999888888888777 54 555654321 2 233 5677777654 2456677765
No 7
>2r75_1 Cell division protein FTSZ; GTPase, tubulin-like, inhibitor, cell cycle; HET: 01G; 1.40A {Aquifex aeolicus} PDB: 2r6r_1*
Probab=99.50 E-value=1.7e-15 Score=140.34 Aligned_cols=152 Identities=11% Similarity=0.070 Sum_probs=112.2
Q ss_pred ccccccccchhHhHHHHHHHHhCcceecEEEEEecCCC--------Ch-hHHhHHhhcCCeeEEeccHHHHHHHH-----
Q psy6839 9 AFGLYFTFFIPLLYFTFLREFFGTTLFQSHTIYHINNL--------NQ-DTLAQIEENSNGTSILAEDEFYDAVE----- 74 (264)
Q Consensus 9 ~~~~~~~~~~~~llle~Lrd~Yp~~~~~~~sV~P~~~~--------Ns-Ltl~~L~e~sD~v~~~dNdaL~~i~~----- 74 (264)
+||+-++ ++ +++|+++|| +++++|+|.+.. |+ |++++|.+++|+++++|||+|++||.
T Consensus 104 GTGSG~~----~~-ia~l~~e~g---~lt~~Vv~~P~~~eg~~~~ynA~~~l~~L~e~~D~~ividNe~L~~i~~~~l~i 175 (338)
T 2r75_1 104 GTGTGAA----PV-IAKTAKEMG---ILTVAVATLPFRFEGPRKMEKALKGLEKLKESSDAYIVIHNDKIKELSNRTLTI 175 (338)
T ss_dssp SHHHHHH----HH-HHHHHHHTT---CEEEEEEEECCGGGCHHHHHHHHHHHHHHHHTCSEEEEEEHHHHHHTSCCCSSH
T ss_pred CcCCCch----HH-HHHHHHhcC---CCEEEEeCCCccccchhhHHHHHHHHHHHHhcCCeEEEeccHHHHhhhhccCCh
Confidence 4555554 88 888999998 678899987754 99 99999999999999999999999985
Q ss_pred ---------------hcCCC----CcccCCChhhccccCCCCCCccc------------------cc-ccccccCCCCCC
Q psy6839 75 ---------------SGSQN----SEDLGSSRKSSIVSLIPAPSSAT------------------AN-HRLWPEEENSNG 116 (264)
Q Consensus 75 ---------------s~~t~----s~~ln~~l~~l~~nLvP~P~lht------------------~~-~ql~~~~~~~~~ 116 (264)
+++|. .|.+|.|++++.++|+|+ ++|. +. .+||+.+.-.
T Consensus 176 ~~af~~~N~~i~~~v~~it~~ir~pG~iNvD~~dv~t~L~~~-g~a~~g~g~a~g~~r~~~a~~~ai~s~lle~n~~~-- 252 (338)
T 2r75_1 176 KDAFKEVDSVLSKAVRGITSIVVTPAVINVDFADVRTTLEEG-GLSIIGMGEGRGDEKADIAVEKAVTSPLLEGNTIE-- 252 (338)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHSCCSBCCCHHHHHHHHTTC-EEEEEEEEEEESTTHHHHHHHHHHHCBSSBSSCGG--
T ss_pred HHHHHHHHHHHHHHHhhhhhhhccCCceeCCHHHhhhheeCC-ccceeeeccCCccchHHHHHHHHHHhhhhcccchh--
Confidence 23333 399999999999999998 6661 11 5566521111
Q ss_pred cccchhhcccc--CcccCC-CC-ccccccCccccccccCCCCCccccccccccceeeecCCCCCCCCCcccchhceeeee
Q psy6839 117 TSILAEDEFYD--AVESGS-QN-SEDLGSSRKSSIVSLIPAPSSATANHRLWPEVGINYQPPTVVPGGDLAKVQRAVCML 192 (264)
Q Consensus 117 ~~Ls~~~i~RG--~~~~~~-~~-~~~i~~~~~~~fv~W~p~~~~~~~~~~~~~kv~l~~~~p~~~~~~~~~~~~~S~~~L 192 (264)
..=.+++.+|| +..++| ++ +..++.+. + .|.++ ++++|..+|. +.+.++++|
T Consensus 253 ~a~~~l~~i~G~~dl~~~ev~~a~~~I~~~~-----~-~~~~i----------~~G~~~~~~~--------~~~~~vtvi 308 (338)
T 2r75_1 253 GARRLLVTIWTSEDIPYDIVDEVMERIHSKV-----H-PEAEI----------IFGAVLEPQE--------QDFIRVAIV 308 (338)
T ss_dssp GCSEEEEEEEECTTSCTTHHHHHHHHHHHHS-----C-TTCEE----------EEEEEECTTC--------CSEEEEEEE
T ss_pred hhheEEEEEEcCCCCCHHHHHHHHHHHHHhc-----C-CCCcE----------EEEEEeCCCC--------CCeEEEEEE
Confidence 11127788999 667666 44 55565432 2 56666 8999999875 357889999
Q ss_pred cCc
Q psy6839 193 SNT 195 (264)
Q Consensus 193 sNs 195 (264)
+|.
T Consensus 309 atg 311 (338)
T 2r75_1 309 ATD 311 (338)
T ss_dssp EEC
T ss_pred ECC
Confidence 986
No 8
>2vxy_A FTSZ, cell division protein FTSZ; GTP-binding, nucleotide-binding, septation, cytoplasm, B.subtilis, cell cycle; HET: CIT; 1.7A {Bacillus subtilis} PDB: 2vam_A* 2rhj_A* 2rhh_A* 2rhl_A* 2rho_A*
Probab=99.49 E-value=2.7e-15 Score=140.97 Aligned_cols=153 Identities=10% Similarity=0.046 Sum_probs=105.7
Q ss_pred cccccccccchhHhHHHHHHHHhCcceecEEEEEecCCC--------Ch-hHHhHHhhcCCeeEEeccHHHHHHHH----
Q psy6839 8 LAFGLYFTFFIPLLYFTFLREFFGTTLFQSHTIYHINNL--------NQ-DTLAQIEENSNGTSILAEDEFYDAVE---- 74 (264)
Q Consensus 8 ~~~~~~~~~~~~~llle~Lrd~Yp~~~~~~~sV~P~~~~--------Ns-Ltl~~L~e~sD~v~~~dNdaL~~i~~---- 74 (264)
=+||+-++ ++|+|.++| |+ +++++|+|.+.. |+ |++++|.+++|++|++|||+|++||.
T Consensus 107 GGTGSG~a----pvla~~ake-~g---~ltvsVvt~Pf~~Eg~~r~~nA~l~l~~L~e~~D~~ividNeaL~~i~~~~l~ 178 (382)
T 2vxy_A 107 GGTGTGAA----PVIAQIAKD-LG---ALTVGVVTRPFTFEGRKRQLQAAGGISAMKEAVDTLIVIPNDRILEIVDKNTP 178 (382)
T ss_dssp SSHHHHHH----HHHHHHHHH-TT---CEEEEEEEECCGGGCHHHHHHHHHHHHHHHHHCSEEEEEEHHHHHHHSCTTCC
T ss_pred CCCCCcHH----HHHHHHHHH-hC---CCeEEEEeCCcccccchhHHHHHHHHHHHHHhCCEEEEEccHHHHHHHHhcCC
Confidence 34555554 899998876 86 567777776653 99 99999999999999999999999985
Q ss_pred ----------------hcCCCC----cccCCChhhccccCCCCCCccc--------------cccccccc----CCCCCC
Q psy6839 75 ----------------SGSQNS----EDLGSSRKSSIVSLIPAPSSAT--------------ANHRLWPE----EENSNG 116 (264)
Q Consensus 75 ----------------s~~t~s----~~ln~~l~~l~~nLvP~P~lht--------------~~~ql~~~----~~~~~~ 116 (264)
+++|.+ |.+|.|++++.++|+| |++|. +.++++.+ .+++.+
T Consensus 179 i~~af~~~N~ll~~~vsgIt~~ir~pG~iNvD~~dv~t~L~~-~g~a~~g~g~a~g~~r~~ea~~~a~~s~ll~~d~~~a 257 (382)
T 2vxy_A 179 MLEAFREADNVLRQGVQGISDLIATPGLINLDFADVKTIMSN-KGSALMGIGIATGENRAAEAAKKAISSPLLEAAIDGA 257 (382)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTTTSSCCTTCCCHHHHHHHTTC-SSEEEEEEEEEESTTHHHHHHHHHHTCTTSCSCGGGC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHcCCCccccCHHHHHHhccC-CCceEEEEEecccccHHHHHHHHHHhCcCcCCChhhc
Confidence 333333 9999999999999999 99991 11333322 256778
Q ss_pred cccchhhccccCcccCC-CC-ccccccCccccccccCCCCCccccccccccceeeecCCCCCCCCCcccchhceeeeec
Q psy6839 117 TSILAEDEFYDAVESGS-QN-SEDLGSSRKSSIVSLIPAPSSATANHRLWPEVGINYQPPTVVPGGDLAKVQRAVCMLS 193 (264)
Q Consensus 117 ~~Ls~~~i~RG~~~~~~-~~-~~~i~~~~~~~fv~W~p~~~~~~~~~~~~~kv~l~~~~p~~~~~~~~~~~~~S~~~Ls 193 (264)
+|+.+....+++...+| ++ +..++.+.. .+..+ +.+.|..++. +.+.++++|+
T Consensus 258 k~~l~~i~gg~dl~~~ev~~a~~~I~~~~~------~~a~i----------i~G~~~d~~~--------~~~v~VtvIa 312 (382)
T 2vxy_A 258 QGVLMNITGGTNLSLYEVQEAADIVASASD------QDVNM----------IFGSVINENL--------KDEIVVTVIA 312 (382)
T ss_dssp SEEEEEEEECTTCCHHHHHHHHHHHHHHSC------TTCEE----------EEEEEECTTC--------SSEEEEEEEE
T ss_pred ceeEEEEEeCCCCCHHHHHHHHHHHHHhcC------CCCCE----------EEEeecCCCC--------CCeEEEEEEE
Confidence 99866444444666666 44 555554321 13334 6777777653 2456666665
No 9
>1w5f_A Cell division protein FTSZ; complete proteome, GTP-binding, multigene family, septation, tubulin, filament, Z-ring, GTPase, domain swapped; HET: G2P; 2.0A {Thermotoga maritima} SCOP: c.32.1.1 d.79.2.1
Probab=99.49 E-value=1.1e-15 Score=142.40 Aligned_cols=154 Identities=10% Similarity=0.106 Sum_probs=112.0
Q ss_pred ccccccccccchhHhHHHHHHHHhCcceecEEEEEecCCC--------Ch-hHHhHHhhcCCeeEEeccHHHHHHHH---
Q psy6839 7 GLAFGLYFTFFIPLLYFTFLREFFGTTLFQSHTIYHINNL--------NQ-DTLAQIEENSNGTSILAEDEFYDAVE--- 74 (264)
Q Consensus 7 ~~~~~~~~~~~~~~llle~Lrd~Yp~~~~~~~sV~P~~~~--------Ns-Ltl~~L~e~sD~v~~~dNdaL~~i~~--- 74 (264)
|=+||+-++ ++|+|.++| || +++++|+|.+.. |+ +++++|.+++|+++++|||+|++||.
T Consensus 116 GGGTGSG~a----p~la~~~ke-~g---~lt~~Vvt~Pf~~Eg~~~~~nA~~~l~~L~e~~D~~ividNeaL~~i~~~~l 187 (353)
T 1w5f_A 116 GGGTGTGAS----PVIAKIAKE-MG---ILTVAIVTTPFYFEGPERLKKAIEGLKKLRKHVDTLIKISNNKLMEELPRDV 187 (353)
T ss_dssp TSSHHHHHH----HHHHHHHHH-TT---CEEEEEEEECCGGGCHHHHHHHHHHHHHHHHTCSEEEEEEHHHHHTTSCTTC
T ss_pred CCCccccHH----HHHHHHHHH-hC---CcEEEEEeCCcccccchhHHHHHHHHHHHHhhCCEEEEEecHHHHhhhcccC
Confidence 334555554 999999987 76 668888866643 99 99999999999999999999999985
Q ss_pred -----------------hcCCC----CcccCC--ChhhccccCCCCCCccc--------------cccccccc----CCC
Q psy6839 75 -----------------SGSQN----SEDLGS--SRKSSIVSLIPAPSSAT--------------ANHRLWPE----EEN 113 (264)
Q Consensus 75 -----------------s~~t~----s~~ln~--~l~~l~~nLvP~P~lht--------------~~~ql~~~----~~~ 113 (264)
+++|. .|.+|. |++++.++|+| |++|. +.++++.+ .++
T Consensus 188 ~i~~af~~~N~ll~~~v~~it~~ir~pG~iNv~~D~~dv~t~L~~-~g~a~~g~g~a~g~~~v~ea~~~a~~~~ll~~d~ 266 (353)
T 1w5f_A 188 KIKDAFLKADETLHQGVKGISELITKRGYIRLTSRFARIESVMKD-AGAAILGIGVGKGEHRAREAAKKAMESKLIEHPV 266 (353)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHTT-CEEEEEEEEEEESTTHHHHHHHHHHTCTTCCSCG
T ss_pred CHHHHHHHHHHHHHHHhcCchhhccCCcccccccCHHHHHHhccC-CCeeEEEEeecCCcchHHHHHHHHHhCCCcCCCh
Confidence 23332 399999 99999999999 99991 11333322 256
Q ss_pred CCCcccchhhccccCcccCC-CC-ccccccCccccccccCCCCCccccccccccceeeecCCCCCCCCCcccch-hceee
Q psy6839 114 SNGTSILAEDEFYDAVESGS-QN-SEDLGSSRKSSIVSLIPAPSSATANHRLWPEVGINYQPPTVVPGGDLAKV-QRAVC 190 (264)
Q Consensus 114 ~~~~~Ls~~~i~RG~~~~~~-~~-~~~i~~~~~~~fv~W~p~~~~~~~~~~~~~kv~l~~~~p~~~~~~~~~~~-~~S~~ 190 (264)
+.++|+.+....||+..+++ ++ +..++.+... |..+ +.+.+..++. +. +.+++
T Consensus 267 ~~ak~~l~~i~~~~dl~~~ev~~a~~~I~~~~~~------~~~i----------~~G~~~d~~~--------~~~~v~vt 322 (353)
T 1w5f_A 267 ENASSIVFNITAPSNIRMEEVHEAAMIIRQNSSE------DADV----------KFGLIFDDEV--------PDDEIRVI 322 (353)
T ss_dssp GGCSEEEEEEEECTTCCHHHHHHHHHHHHTTSCT------TSEE----------EEEEEECTTS--------CTTEEEEE
T ss_pred hhcceeEEEEEeCCCCCHHHHHHHHHHHHHhhCC------CCcE----------EEEEEeCCCC--------CCCeEEEE
Confidence 78899999888888888777 55 5566544311 4444 6778877664 23 56666
Q ss_pred eec
Q psy6839 191 MLS 193 (264)
Q Consensus 191 ~Ls 193 (264)
+++
T Consensus 323 via 325 (353)
T 1w5f_A 323 FIA 325 (353)
T ss_dssp EEE
T ss_pred EEE
Confidence 664
No 10
>1ofu_A FTSZ, cell division protein FTSZ; bacterial cell division inhibitor, SULA protein; HET: GDP; 2.1A {Pseudomonas aeruginosa} SCOP: c.32.1.1 d.79.2.1
Probab=99.46 E-value=6.2e-15 Score=135.72 Aligned_cols=154 Identities=10% Similarity=0.061 Sum_probs=109.3
Q ss_pred ccccccccccchhHhHHHHHHHHhCcceecEEEEEecCCC--------Ch-hHHhHHhhcCCeeEEeccHHHHHHHH---
Q psy6839 7 GLAFGLYFTFFIPLLYFTFLREFFGTTLFQSHTIYHINNL--------NQ-DTLAQIEENSNGTSILAEDEFYDAVE--- 74 (264)
Q Consensus 7 ~~~~~~~~~~~~~~llle~Lrd~Yp~~~~~~~sV~P~~~~--------Ns-Ltl~~L~e~sD~v~~~dNdaL~~i~~--- 74 (264)
|=+||+-++ ++|. .+.++|+ +++++|+|.+.. |+ +++++|.+++|+++++|||+|++||.
T Consensus 106 GGGTGSG~~----~~la-~~a~e~g---~lt~~vv~~P~~~Eg~~~~~nA~~~l~~L~e~~D~~ividNe~L~~i~~~~l 177 (320)
T 1ofu_A 106 GGGTGTGAA----PIIA-EVAKEMG---ILTVAVVTRPFPFEGRKRMQIADEGIRALAESVDSLITIPNEKLLTILGKDA 177 (320)
T ss_dssp TSSHHHHHH----HHHH-HHHHHTT---CEEEEEEEECCGGGCHHHHHHHHHHHHHHHTTCSEEEEEEHHHHHHHHGGGC
T ss_pred CCCccccHH----HHHH-HHHHhcC---CcEEEEEeCCccccchhHHHHHHHHHHHHHHhCCEEEEEecHHhhhhhhcCC
Confidence 334555554 7665 5667785 467777765543 99 99999999999999999999999996
Q ss_pred -----------------hcCCC----CcccCCChhhccccCCCCCCccc--------------c----c-ccccccCCCC
Q psy6839 75 -----------------SGSQN----SEDLGSSRKSSIVSLIPAPSSAT--------------A----N-HRLWPEEENS 114 (264)
Q Consensus 75 -----------------s~~t~----s~~ln~~l~~l~~nLvP~P~lht--------------~----~-~ql~~~~~~~ 114 (264)
+++|. .|.+|.|++++.++|+| |++|. + + ..|+.+.+++
T Consensus 178 ~i~~af~~~n~~l~~~v~~it~~ir~pG~iNvD~~dv~t~l~~-~g~~~~g~g~a~g~~~~~~a~~~a~~~~ll~~~d~~ 256 (320)
T 1ofu_A 178 SLLAAFAKADDVLAGAVRGISDIIKRPGMINVDFADVKTVMSE-MGMAMMGTGCASGPNRAREATEAAIRNPLLEDVNLQ 256 (320)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHSCSSSSCCHHHHHHHHTT-CEEEEEEEEEEESTTHHHHHHHHHHTCGGGTTCCGG
T ss_pred CHHHHHHHHHHHHHHHhcccHhhcccCCceeecHHHHHHhccC-CCeeEEEEEecCcccHHHHHHHHHHhccccccCCcc
Confidence 22332 39999999999999999 99991 1 1 3455434677
Q ss_pred CCcccchhhccccCcccCC-CC-ccccccCccccccccCCCCCccccccccccceeeecCCCCCCCCCcccchhceeeee
Q psy6839 115 NGTSILAEDEFYDAVESGS-QN-SEDLGSSRKSSIVSLIPAPSSATANHRLWPEVGINYQPPTVVPGGDLAKVQRAVCML 192 (264)
Q Consensus 115 ~~~~Ls~~~i~RG~~~~~~-~~-~~~i~~~~~~~fv~W~p~~~~~~~~~~~~~kv~l~~~~p~~~~~~~~~~~~~S~~~L 192 (264)
.++|+.+....||+..++| ++ +..++.+... +..+ +.+.+..++. +.+.+++++
T Consensus 257 ~ak~~l~~i~~~~d~~~~ev~~a~~~i~~~~~~------~~~i----------i~G~~~~~~~--------~~~v~vtvi 312 (320)
T 1ofu_A 257 GARGILVNITAGPDLSLGEYSDVGNIIEQFASE------HATV----------KVGTVIDADM--------RDELHVTVV 312 (320)
T ss_dssp GCSEEEEEEEECTTCCHHHHHHHHHHHHHHSCT------TSEE----------EEEEEECTTC--------CSEEEEEEE
T ss_pred ccceEEEEEEeCCCCCHHHHHHHHHHHHHhcCC------CCcE----------EEEEEcCCCC--------CCeEEEEEE
Confidence 8899998888888888777 55 5556543211 3344 6778877653 246667776
Q ss_pred c
Q psy6839 193 S 193 (264)
Q Consensus 193 s 193 (264)
+
T Consensus 313 a 313 (320)
T 1ofu_A 313 A 313 (320)
T ss_dssp E
T ss_pred E
Confidence 5
No 11
>2vaw_A FTSZ, cell division protein FTSZ; bacterial cell division protein, tubulin homolog, nucleotide-binding, GTPase, septation, cytoplasm; HET: GDP; 2.90A {Pseudomonas aeruginosa} SCOP: c.32.1.1 d.79.2.1
Probab=99.44 E-value=1.1e-14 Score=137.34 Aligned_cols=153 Identities=9% Similarity=0.070 Sum_probs=110.5
Q ss_pred ccccccccchhHhHHHHHHHHhCcceecEEEEEecCCC--------Ch-hHHhHHhhcCCeeEEeccHHHHHHHH-----
Q psy6839 9 AFGLYFTFFIPLLYFTFLREFFGTTLFQSHTIYHINNL--------NQ-DTLAQIEENSNGTSILAEDEFYDAVE----- 74 (264)
Q Consensus 9 ~~~~~~~~~~~~llle~Lrd~Yp~~~~~~~sV~P~~~~--------Ns-Ltl~~L~e~sD~v~~~dNdaL~~i~~----- 74 (264)
+||+-++ ++|+|.++ +|+ +++++|+|.+.. |+ |++++|.+++|++|++|||+|++||.
T Consensus 108 GTGSG~a----p~lae~~k-e~g---~ltvsVv~~Pf~~Eg~~r~ynA~~~l~~L~e~~D~~ividNeaL~~i~~~~l~i 179 (394)
T 2vaw_A 108 GTGTGAA----PIIAEVAK-EMG---ILTVAVVTRPFPFEGRKRMQIADEGIRALAESVDSLITIPNEKLLTILGKDASL 179 (394)
T ss_dssp SHHHHHH----HHHHHHHH-HHT---CEEEEEEEECCGGGHHHHHHHHHHHHHHHHTTCSEEEEEEHHHHHHHHGGGCCH
T ss_pred CccccHH----HHHHHHHH-HcC---CcEEEEecCCcccccchhhHHHHHHHHHHHHhCCEEEEEecHHHHHHhhcCCCh
Confidence 4555554 99999999 674 557777765543 99 99999999999999999999999996
Q ss_pred ---------------hcCCC----CcccCCChhhccccCCCCCCccc--------------cccc-----ccccCCCCCC
Q psy6839 75 ---------------SGSQN----SEDLGSSRKSSIVSLIPAPSSAT--------------ANHR-----LWPEEENSNG 116 (264)
Q Consensus 75 ---------------s~~t~----s~~ln~~l~~l~~nLvP~P~lht--------------~~~q-----l~~~~~~~~~ 116 (264)
+++|. .|.+|.|++++.++|+| |++|. ..++ |+.+.+++.+
T Consensus 180 ~~af~~~N~li~~~v~~it~~ir~pG~iNvD~~dv~t~L~~-~g~a~~g~g~a~g~~rv~ea~~~A~~spLl~~~d~~~a 258 (394)
T 2vaw_A 180 LAAFAKADDVLAGAVRGISDIIKRPGMINVDFADVKTVMSE-MGMAMMGTGCASGPNRAREATEAAIRNPLLEDVNLQGA 258 (394)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHSBCSSCCCHHHHHHHHTT-TCCBEEEEEEECSTTHHHHHHHHHHTCGGGTTCCTTTC
T ss_pred HHHHHHHHHHHHHHHHHHHHHhcCCCcccccHHHHHHhccC-CCceeEEEEeccccchHHHHHHHHHhcCccCCCCcccc
Confidence 22332 39999999999999999 78881 1134 4443367788
Q ss_pred cccchhhccccCcccCC-CC-ccccccCccccccccCCCCCccccccccccceeeecCCCCCCCCCcccchhceeeeecC
Q psy6839 117 TSILAEDEFYDAVESGS-QN-SEDLGSSRKSSIVSLIPAPSSATANHRLWPEVGINYQPPTVVPGGDLAKVQRAVCMLSN 194 (264)
Q Consensus 117 ~~Ls~~~i~RG~~~~~~-~~-~~~i~~~~~~~fv~W~p~~~~~~~~~~~~~kv~l~~~~p~~~~~~~~~~~~~S~~~LsN 194 (264)
+|+.+....+|+...++ .+ +..++.+... +..+ +.+.|..++. +.+.++++|+-
T Consensus 259 k~~lv~i~~~~dl~~~ev~~a~~~I~~~~~~------~a~i----------~~G~~~d~~~--------~~~v~VtvIat 314 (394)
T 2vaw_A 259 RGILVNITAGPDLSLGEYSDVGNIIEQFASE------HATV----------KVGTVIDADM--------RDELHVTVVAT 314 (394)
T ss_dssp SEEEEEEEECTTCCHHHHHHHHHHHHHHSCT------TSEE----------EEEEEECSSC--------CSCEEEEEEEE
T ss_pred ceeEEEEEeCCCCCHHHHHHHHHHHHHhcCC------CCCE----------EEEeecCCCC--------CCeEEEEEEEc
Confidence 99998888888887777 54 5556543211 3334 6788877764 24667777763
No 12
>1rq2_A Cell division protein FTSZ; cell cycle, tubulin, GTPase, signaling protein; HET: CIT; 1.86A {Mycobacterium tuberculosis} SCOP: c.32.1.1 d.79.2.1 PDB: 1rlu_A* 1rq7_A* 2q1y_A* 2q1x_A*
Probab=99.41 E-value=4.6e-15 Score=139.35 Aligned_cols=154 Identities=9% Similarity=0.012 Sum_probs=106.7
Q ss_pred ccccccccccchhHhHHHHHHHHhCcceecEEEEEecCCC--------Ch-hHHhHHhhcCCeeEEeccHHHHHHHH---
Q psy6839 7 GLAFGLYFTFFIPLLYFTFLREFFGTTLFQSHTIYHINNL--------NQ-DTLAQIEENSNGTSILAEDEFYDAVE--- 74 (264)
Q Consensus 7 ~~~~~~~~~~~~~~llle~Lrd~Yp~~~~~~~sV~P~~~~--------Ns-Ltl~~L~e~sD~v~~~dNdaL~~i~~--- 74 (264)
|=+||+-++ ++|+| |+++|| +++++|+|.+.. |+ |++++|.+++|++|++|||+|++||.
T Consensus 106 GGGTGSG~a----p~lae-la~e~g---~ltvsVv~~Pf~~Eg~~~~~nA~l~l~~L~e~~D~~ividNeaL~~i~~~~l 177 (382)
T 1rq2_A 106 GGGTGTGGA----PVVAS-IARKLG---ALTVGVVTRPFSFEGKRRSNQAENGIAALRESCDTLIVIPNDRLLQMGDAAV 177 (382)
T ss_dssp TSSHHHHHH----HHHHH-HHHHHT---CEEEEEEEECCGGGCHHHHHHHHHHHHHHHHHCSEEEEEEHHHHTTSSCTTC
T ss_pred CCCccccHH----HHHHH-HHHHcC---CcEEEEEecCcccccchHHHHHHHHHHHHHHhCCEEEEEechhHHHHhcCCC
Confidence 335666665 88888 888898 455666655433 99 99999999999999999999999985
Q ss_pred -----------------hcCCC----CcccCCChhhccccCCCCCCccc--------------cccc-----ccccCCCC
Q psy6839 75 -----------------SGSQN----SEDLGSSRKSSIVSLIPAPSSAT--------------ANHR-----LWPEEENS 114 (264)
Q Consensus 75 -----------------s~~t~----s~~ln~~l~~l~~nLvP~P~lht--------------~~~q-----l~~~~~~~ 114 (264)
+++|. .|.+|.|++++.++|+| |++|. +.++ |+. .+++
T Consensus 178 ~i~~af~~~N~li~~~vs~it~~ir~pG~iNvD~~dv~t~L~~-~g~a~~g~g~a~g~~r~~ea~~~a~~s~ll~-~d~~ 255 (382)
T 1rq2_A 178 SLMDAFRSADEVLLNGVQGITDLITTPGLINVDFADVKGIMSG-AGTALMGIGSARGEGRSLKAAEIAINSPLLE-ASME 255 (382)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHSBCSSCCCHHHHHHHHTT-CEEEEEEEEEEESTTHHHHHHHHHHTCGGGT-TCGG
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHccCCceeccHHHHHHhccC-CCeeEEEeeecccccHHHHHHHHHHhCcCcC-CChh
Confidence 23333 39999999999999999 88881 1133 332 2567
Q ss_pred CCcccchhhccccCcccCC-CC-ccccccCccccccccCCCCCccccccccccceeeecCCCCCCCCCcccchhceeeee
Q psy6839 115 NGTSILAEDEFYDAVESGS-QN-SEDLGSSRKSSIVSLIPAPSSATANHRLWPEVGINYQPPTVVPGGDLAKVQRAVCML 192 (264)
Q Consensus 115 ~~~~Ls~~~i~RG~~~~~~-~~-~~~i~~~~~~~fv~W~p~~~~~~~~~~~~~kv~l~~~~p~~~~~~~~~~~~~S~~~L 192 (264)
.++|+.+....+++..++| ++ +..++.+.. .+..+ +.++|..++. +.+.++++|
T Consensus 256 ~ak~~l~~i~gg~dl~~~ev~~a~~~I~~~~~------~~a~i----------i~G~~~d~~~--------~~~v~VtvI 311 (382)
T 1rq2_A 256 GAQGVLMSIAGGSDLGLFEINEAASLVQDAAH------PDANI----------IFGTVIDDSL--------GDEVRVTVI 311 (382)
T ss_dssp GCSEEEEEEEECTTCCHHHHHHHHHHHHHHSC------TTCEE----------EEEEEECGGG--------TTEEEEEEE
T ss_pred chheEEEEEEeCCCCCHHHHHHHHHHHHHhhC------CCCCE----------EEEEEeCCCC--------CCeEEEEEE
Confidence 8899876444444677666 44 555554321 24444 6788877653 246677777
Q ss_pred cC
Q psy6839 193 SN 194 (264)
Q Consensus 193 sN 194 (264)
+-
T Consensus 312 at 313 (382)
T 1rq2_A 312 AA 313 (382)
T ss_dssp EE
T ss_pred Ec
Confidence 53
No 13
>4dxd_A Cell division protein FTSZ; rossmann fold, GTPase, GTP binding, cell cycle-inhibitor COM; HET: GDP 9PC; 2.01A {Staphylococcus aureus} PDB: 3vo8_A*
Probab=98.82 E-value=3.9e-10 Score=105.74 Aligned_cols=83 Identities=8% Similarity=0.069 Sum_probs=66.8
Q ss_pred ccccccccccchhHhHHHHHHHHhCcceecEEEEEecCCC--------Ch-hHHhHHhhcCCeeEEeccHHHHHHHH---
Q psy6839 7 GLAFGLYFTFFIPLLYFTFLREFFGTTLFQSHTIYHINNL--------NQ-DTLAQIEENSNGTSILAEDEFYDAVE--- 74 (264)
Q Consensus 7 ~~~~~~~~~~~~~~llle~Lrd~Yp~~~~~~~sV~P~~~~--------Ns-Ltl~~L~e~sD~v~~~dNdaL~~i~~--- 74 (264)
|=+||+-++ ++|.+ +..+|| +++++|+|.+.. |+ |++++|.+++|++|++||++|++||.
T Consensus 112 GGGTGSGaa----pvIae-iake~g---~LtvsVVt~Pf~~Eg~~r~yNA~lgl~~L~e~vD~vIvIdNeaL~~I~~~~l 183 (396)
T 4dxd_A 112 GGGTGTGAA----PVVAK-IAKEMG---ALTVGVVTRPFSFEGRKRQTQAAAGVEAMKAAVDTLIVIPNDRLLDIVDKST 183 (396)
T ss_dssp TSSHHHHHH----HHHHH-HHHHTT---CEEEEEEEECCGGGCHHHHHHHHHHHHHHHHHSSEEEEEEGGGGGGTCCTTC
T ss_pred CCCccccHH----HHHHH-HHHhcC---CceEEEEeCCccccchHHHHHHHHHHHHHHhhCCEEEEEcCHHHHHhhcccc
Confidence 445666665 76655 667787 478899876653 99 99999999999999999999999985
Q ss_pred -----------------hcCCCC----cccCCChhhccccCCCC
Q psy6839 75 -----------------SGSQNS----EDLGSSRKSSIVSLIPA 97 (264)
Q Consensus 75 -----------------s~~t~s----~~ln~~l~~l~~nLvP~ 97 (264)
+++|.+ |.+|.|++++.++|.+.
T Consensus 184 ~i~~af~~aN~ll~q~VsgIT~~irfpG~iNvDfaDv~t~m~~~ 227 (396)
T 4dxd_A 184 PMMEAFKEADNVLRQGVQGISDLIAVSGEVNLDFADVKTIMSNQ 227 (396)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHSCCTBCCCHHHHHHHHTTC
T ss_pred cHHHHHHHHHHHHHHHHHhhhhhhccCCcccCCHHHHHHHhhcC
Confidence 333333 99999999999999886
No 14
>3v3t_A Cell division GTPase FTSZ, diverged; TUBZ, tubulin/FTSZ related, rossmann fold, GTP bindi structural protein; 2.30A {Clostridium botulinum C}
Probab=98.77 E-value=1.6e-09 Score=100.57 Aligned_cols=80 Identities=9% Similarity=0.031 Sum_probs=62.0
Q ss_pred ccccccccccchhHhHHHHHHHHhCcceecEEEEEecCCC------Ch-hHHhHHhh---cCC--eeEEeccHHH-----
Q psy6839 7 GLAFGLYFTFFIPLLYFTFLREFFGTTLFQSHTIYHINNL------NQ-DTLAQIEE---NSN--GTSILAEDEF----- 69 (264)
Q Consensus 7 ~~~~~~~~~~~~~~llle~Lrd~Yp~~~~~~~sV~P~~~~------Ns-Ltl~~L~e---~sD--~v~~~dNdaL----- 69 (264)
|=+||+-++ ++|+|.||++||++.+..++|||++.. |+ |++++|.+ ++| |++++||++.
T Consensus 99 GGGTGSG~~----pvLae~lke~~~~k~v~~vtV~Pf~~Egvv~pyNA~l~l~~L~e~sD~vD~lcvividNea~~ay~~ 174 (360)
T 3v3t_A 99 AGGAGSGIT----PPILGLAKQMYPNKHFGFVGVLPKATEDIDEHMNAIACWNDIMRSTNEGKDISIYLLDNNKREKESD 174 (360)
T ss_dssp TSHHHHHHH----HHHHHHHHHHCTTSEEEEEEEECCTTSCHHHHHHHHHHHHHHHHHTTTTTSSEEEEEEGGGSSSHHH
T ss_pred CCCccccHH----HHHHHHHHHhCCCCeEEEEEEeCCCccchhhHHHHHHHHHHHHhhhccCCceEEEEEeCCCchhHHH
Confidence 345666666 999999999999999999999999866 99 99999999 455 5599999973
Q ss_pred -HHHHH---hcCCC----CcccCCChhhc
Q psy6839 70 -YDAVE---SGSQN----SEDLGSSRKSS 90 (264)
Q Consensus 70 -~~i~~---s~~t~----s~~ln~~l~~l 90 (264)
.++.. ++++. .|.+|.|+.++
T Consensus 175 lN~lIaq~vs~lt~~l~~~G~iNVDfaDv 203 (360)
T 3v3t_A 175 INKEFATLFNDFMNMSESHAEGVVDEDEI 203 (360)
T ss_dssp HHHHHHHHHHHHHGGGSCCSSCCCCHHHH
T ss_pred HHHHHHHHHHHHHHhhccCCceeeeHHHH
Confidence 11111 22332 38899998887
No 15
>3m89_A FTSZ/tubulin-related protein; partition, TUBZ, GTP-binding, nucleotide-BIND structural protein; HET: GSP; 2.00A {Bacillus thuringiensis} PDB: 3m8k_A 2xka_A* 2xkb_A*
Probab=98.71 E-value=2.3e-09 Score=101.32 Aligned_cols=85 Identities=14% Similarity=0.032 Sum_probs=71.8
Q ss_pred chhHhHHHHHHHHhCcceecEEEEEecCCC----Ch-hHHhHH---hh------------cCCeeEEeccHHHHHHHHh-
Q psy6839 17 FIPLLYFTFLREFFGTTLFQSHTIYHINNL----NQ-DTLAQI---EE------------NSNGTSILAEDEFYDAVES- 75 (264)
Q Consensus 17 ~~~~llle~Lrd~Yp~~~~~~~sV~P~~~~----Ns-Ltl~~L---~e------------~sD~v~~~dNdaL~~i~~s- 75 (264)
+.+++|++.|||+||++.+..++|||+... |+ +++++| ++ ++|++|++||++|.+++.+
T Consensus 164 G~gp~la~~lke~~~~~~~~~vvt~P~~~e~~~~NA~~~l~~L~~L~~~~~~~~~~~~~~~~D~vividNe~l~~i~~~~ 243 (427)
T 3m89_A 164 GWGSLVLQLIREQFFPCPVSMLISLPSGDPDEINNALVLLSEIDEFMREQDRLFGNSDIKPLANVIVNDNTQMQRIIESQ 243 (427)
T ss_dssp HHHHHHHHHHHTTCSSSCEEEEEEECCSCHHHHHHHHHHHHHHHHHHHHHHHHSCTTSCCSEEEEEEEEHHHHHHHHHHS
T ss_pred cHHHHHHHHHHHhcCCCcEEEEEEECCCCccHHHHHHHHHHHHHHHhhhhcccccccccccccEEEEEehHHHHHHHhhc
Confidence 444999999999999999999999999876 99 999996 55 9999999999999877631
Q ss_pred --------------------------cC----C--CCcccCCChhhccccCCCCCCcc
Q psy6839 76 --------------------------GS----Q--NSEDLGSSRKSSIVSLIPAPSSA 101 (264)
Q Consensus 76 --------------------------~~----t--~s~~ln~~l~~l~~nLvP~P~lh 101 (264)
.+ + .+|.+|.|++++.++|.|.|.+-
T Consensus 244 ~~~~~~~~~~~af~~~aN~~Ia~~I~~I~~~i~~~~~G~iNvD~aDv~t~L~~~~G~a 301 (427)
T 3m89_A 244 KGTKDLKNRYVNWKEVANDNVVSTLHEINIIPENYGSDNVTYDPSDLIKLLSIPGRFL 301 (427)
T ss_dssp SCSSSCCCSCSCHHHHHHHHHHHHHHHHHHHHHHCCCSSSCCCHHHHHHHHHSSCSEE
T ss_pred cccccccchhhHHHHHHHHHHHHHHHHHHHHhccCCCCcEeecHHHHHHhCCCCCCeE
Confidence 11 1 13889999999999999998855
No 16
>2e4h_B Tubulin alpha-ubiquitous chain; cytoskeleton, CAP-Gly, complex structure, solution structure, CLIP, structural protein; NMR {Homo sapiens}
Probab=97.14 E-value=0.00037 Score=43.54 Aligned_cols=35 Identities=89% Similarity=1.304 Sum_probs=26.6
Q ss_pred hhHHHHHHHHHHHHHHHHHHccCCccCCC-CCccCC
Q psy6839 230 GEFSEAREDLAALEKDYEEVGMDSVEGEG-EGAEEY 264 (264)
Q Consensus 230 ~eF~eA~~~le~li~eY~~~~~~~~~~~~-~~~~~~ 264 (264)
++|.||+++|.+|+++|+++..+.+++++ ++.+||
T Consensus 1 ~EFsEA~edl~~L~~dYee~~~~~~e~~~~~~~~~~ 36 (36)
T 2e4h_B 1 GEFSEAREDMAALEKDYEEVGVDSVEGEGEEEGEEY 36 (36)
T ss_pred CcchHHHHHHHHHHHHHHHHhccccccccccccccC
Confidence 47999999999999999999877664332 233454
No 17
>4ei7_A Plasmid replication protein REPX; GTP hydrolase, plasmid segregation; HET: GDP; 1.90A {Bacillus cereus} PDB: 4ei8_A 4ei9_A*
Probab=92.99 E-value=0.14 Score=47.87 Aligned_cols=56 Identities=16% Similarity=0.106 Sum_probs=40.6
Q ss_pred chhHhHHHHHHHHhCcceecEEEEEecCCC------Ch-hHHhHH---hhcCCeeEEeccHHHHHHHH
Q psy6839 17 FIPLLYFTFLREFFGTTLFQSHTIYHINNL------NQ-DTLAQI---EENSNGTSILAEDEFYDAVE 74 (264)
Q Consensus 17 ~~~~llle~Lrd~Yp~~~~~~~sV~P~~~~------Ns-Ltl~~L---~e~sD~v~~~dNdaL~~i~~ 74 (264)
+.+.++.+.++|.. ......+.+|+... |+ -++..| .+++|.+|++||+.|.++..
T Consensus 128 Ga~pvia~~~ke~~--~~~~~vvt~Pf~~Eg~~~~~~A~~~i~~l~~~~~~vd~~ividN~~l~~~~~ 193 (389)
T 4ei7_A 128 GALLKAIEMLYEHD--YNFGLLLTLPRDAEALKVLENATSRIRSIAMNQEAFGSIVLIDNAKLYRKFE 193 (389)
T ss_dssp HHHHHHHHHHHHTT--CCEEEEEEECCGGGHHHHHHHHHHHHHHHHHTGGGSSEEEEEEHHHHHHHHH
T ss_pred ccHHHHHHHHHHcC--CCEEEEEEeCCCcCchHHHHHHHHHHHHHHHHhccCCeEEEeccHHHHHHHh
Confidence 34478899998842 23334556898765 66 666666 57789999999999999864
No 18
>3pu6_A Uncharacterized protein; structural genomics, PSI-2, protein structure initiative, NE SGX research center for structural genomics; 2.60A {Wolinella succinogenes}
Probab=57.64 E-value=16 Score=29.34 Aligned_cols=59 Identities=5% Similarity=-0.170 Sum_probs=40.3
Q ss_pred CcEEEEccccccccccchhHhHHHHHHHHhCcceecEEEEEecCCCChhHHhHHhh--cCCeeEEec
Q psy6839 1 MSVVIFGLAFGLYFTFFIPLLYFTFLREFFGTTLFQSHTIYHINNLNQDTLAQIEE--NSNGTSILA 65 (264)
Q Consensus 1 ~~~~~~~~~~~~~~~~~~~~llle~Lrd~Yp~~~~~~~sV~P~~~~NsLtl~~L~e--~sD~v~~~d 65 (264)
|.++|+||+--+.===++|-.+.|+|+.++|+..+...-.-| +.+-..++ .+|.+|++|
T Consensus 3 m~ilVlGiGN~L~gDDG~G~~v~~~L~~~~p~v~vid~Gt~~------~~l~~~l~~~~~d~lIiVD 63 (157)
T 3pu6_A 3 LKKVLLCVGNELRGDDGVAIALGRLVEEQMPEWSVFFGYDTP------ESEFGKLRELAPDVIVVAD 63 (157)
T ss_dssp CCEEEEEECCTTBGGGGHHHHHHHHHHHHCTTEEEEEEETCG------GGGHHHHHHHCCSEEEEEE
T ss_pred CCEEEEEECCcccccccHHHHHHHHHHhhCCCeEEEECCCCH------HHHHHHHHhcCCCEEEEEE
Confidence 568899998665555578899999999888844333222111 44445555 499999999
No 19
>1pq1_B BCL2-like protein 11; BCL-XL/BIM, apoptosis; 1.65A {Mus musculus}
Probab=39.11 E-value=18 Score=21.35 Aligned_cols=26 Identities=31% Similarity=0.616 Sum_probs=22.6
Q ss_pred HHHHHHHHhHHHHHHHhhhhcceecc
Q psy6839 197 AIAEAWARLDHKFDLMYAKRAFVHWY 222 (264)
Q Consensus 197 sI~~~l~~i~~~f~~mf~krAfLH~Y 222 (264)
.|.+-|.+|-+.|..-|.||.++..|
T Consensus 7 wIAQELRRIGDeFNa~ypRR~~~~~~ 32 (33)
T 1pq1_B 7 RIAQELRRIGDEFNETYTRRVFANDY 32 (33)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHhHHhhcccchHHHhhcC
Confidence 57788999999999999999888654
No 20
>1cfz_A Hydrogenase 2 maturation protease; metzincins, nickel; 2.20A {Escherichia coli} SCOP: c.56.1.1 PDB: 2kml_A
Probab=37.76 E-value=29 Score=27.74 Aligned_cols=61 Identities=15% Similarity=0.038 Sum_probs=39.5
Q ss_pred CcEEEEccccccccccchhHhHHHHHHHHhCcceecEEEEEecCCCCh-hHHhHHhhcCCeeEEec
Q psy6839 1 MSVVIFGLAFGLYFTFFIPLLYFTFLREFFGTTLFQSHTIYHINNLNQ-DTLAQIEENSNGTSILA 65 (264)
Q Consensus 1 ~~~~~~~~~~~~~~~~~~~~llle~Lrd~Yp~~~~~~~sV~P~~~~Ns-Ltl~~L~e~sD~v~~~d 65 (264)
|.++|+||+-=+.===++|-.+.|+|+++|+-. -+..|.=-. -. +.+-..++-+|.++++|
T Consensus 1 m~ilVlGiGN~l~gDDG~G~~v~~~L~~~~~~p--~~v~vid~g--t~~~~l~~~l~~~d~lIiVD 62 (162)
T 1cfz_A 1 MRILVLGVGNILLTDEAIGVRIVEALEQRYILP--DYVEILDGG--TAGMELLGDMANRDHLIIAD 62 (162)
T ss_dssp CCEEEEEESCTTBGGGGHHHHHHHHHHHHEECC--TTEEEEEEE--TCCGGGHHHHSSCSEEEEEE
T ss_pred CCEEEEEECCcccccccHHHHHHHHHHhhCCCC--CCeEEEECC--CCHHHHHHHHhCCCEEEEEE
Confidence 678999997655545578899999999985310 011122111 22 44455566689999999
No 21
>3hr5_R M1prime-derived peptide; FAB-peptide complex, immune system; 2.40A {Mus musculus}
Probab=29.75 E-value=16 Score=21.46 Aligned_cols=14 Identities=14% Similarity=0.266 Sum_probs=9.5
Q ss_pred hhccccCCCCCCcc
Q psy6839 88 KSSIVSLIPAPSSA 101 (264)
Q Consensus 88 ~~l~~nLvP~P~lh 101 (264)
..-..--||+|++|
T Consensus 22 praaggsvphprch 35 (35)
T 3hr5_R 22 PRAAGGSVPHPRCH 35 (35)
T ss_pred ccccCCCCCCCCCC
Confidence 33344568999987
No 22
>2e85_A Hydrogenase 3 maturation protease; structural genomics, NPPSFA, national project on protein structural and functional analyses; 1.70A {Escherichia coli} PDB: 2i8l_A
Probab=26.34 E-value=79 Score=25.07 Aligned_cols=60 Identities=7% Similarity=-0.141 Sum_probs=38.1
Q ss_pred CcEEEEccccccccccchhHhHHHHHHHHhCcceecEEEEEecCCCChhHHhHHh-h-cCCeeEEec
Q psy6839 1 MSVVIFGLAFGLYFTFFIPLLYFTFLREFFGTTLFQSHTIYHINNLNQDTLAQIE-E-NSNGTSILA 65 (264)
Q Consensus 1 ~~~~~~~~~~~~~~~~~~~~llle~Lrd~Yp~~~~~~~sV~P~~~~NsLtl~~L~-e-~sD~v~~~d 65 (264)
|.++|+||+-=+.===++|-.+.|+|++++|.. ..|+=-.+. .+.+-..+ + ..|.++++|
T Consensus 4 M~~lVlGiGN~l~gDDG~G~~v~~~L~~~~~~~----v~vid~gt~-~~~l~~~l~~~~~d~lIiVD 65 (159)
T 2e85_A 4 VTDVLLCVGNSMMGDDGAGPLLAEKCAAAPKGN----WVVIDGGSA-PENDIVAIRELRPTRLLIVD 65 (159)
T ss_dssp CCEEEEEECCGGGGGGGHHHHHHHHHHHSCCTT----CEEEECTTC-SGGGHHHHHHHCCSEEEEEE
T ss_pred CCEEEEEECCcccccccHHHHHHHHHhhhCCCC----eEEEECCCC-HHHHHHHHhcCCCCEEEEEE
Confidence 678899987655544578899999999987632 223221111 13333334 4 369999999
No 23
>2ket_A Cathelicidin-6; antimicrobial peptide, antibiotic, antimicrobial, fungicide, pyrrolidone carboxylic acid, secreted; NMR {Bos taurus}
Probab=22.66 E-value=54 Score=18.12 Aligned_cols=15 Identities=27% Similarity=0.607 Sum_probs=11.9
Q ss_pred HHHhHHHHHHHhhhh
Q psy6839 202 WARLDHKFDLMYAKR 216 (264)
Q Consensus 202 l~~i~~~f~~mf~kr 216 (264)
|++..++|.++|++-
T Consensus 3 fkrfrkkfkklfkkl 17 (27)
T 2ket_A 3 FKRFRKKFKKLFKKL 17 (27)
T ss_dssp HHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhc
Confidence 567788899998874
No 24
>3f1i_H Hepatocyte growth factor-regulated tyrosine kinas substrate; HGS, ESCRT, ubiquitin, MVB, endosome, membrane, metal- phosphoprotein, protein transport, transport; 2.30A {Homo sapiens}
Probab=22.50 E-value=63 Score=24.03 Aligned_cols=59 Identities=19% Similarity=0.330 Sum_probs=40.1
Q ss_pred eeeecCchHHHHHHHHhHHHHHHHhhhhccee----ccccCCCC--hhhHHHHHHHHHHHHHHHHHH
Q psy6839 189 VCMLSNTTAIAEAWARLDHKFDLMYAKRAFVH----WYVGEGME--EGEFSEAREDLAALEKDYEEV 249 (264)
Q Consensus 189 ~~~LsNsTsI~~~l~~i~~~f~~mf~krAfLH----~Y~~eGme--e~eF~eA~~~le~li~eY~~~ 249 (264)
|--++|.++|..+|..+..=--++.+....+. || ||+. -....||+..++.+-+++++=
T Consensus 27 Grsi~nDssVQsLF~~lt~MH~~Ll~~i~~~ee~R~~y--E~LQDkL~qi~eAR~ALdaLR~eH~~K 91 (98)
T 3f1i_H 27 GRSITNDSAVLSLFQSINGMHPQLLELLNQLDERRLYY--EGLQDKLAQIRDARGALSALREEHREK 91 (98)
T ss_dssp TCCGGGCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCCcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 55678999999999987665555544332222 23 3443 446889999999999998653
Done!