RPS-BLAST 2.2.26 [Sep-21-2011]

Database: scop70_1_75 
           13,730 sequences; 2,407,596 total letters

Searching..................................................done

Query= psy6842
         (189 letters)



>d1lcla_ b.29.1.3 (A:) Charcot-Leyden crystal (CLC) protein {Human
           (Homo sapiens) [TaxId: 9606]}
          Length = 141

 Score = 24.9 bits (54), Expect = 4.7
 Identities = 7/57 (12%), Positives = 19/57 (33%), Gaps = 9/57 (15%)

Query: 139 WGREKELMKLW---------NLHVMKYGYIVWLGDFKQGGYQPKIPLKKKQTLSVKG 186
           W ++ E   +          ++ V+   Y V +       +  +I  +  + + V  
Sbjct: 71  WKQQVESKNMPFQDGQEFELSISVLPDKYQVMVNGQSSYTFDHRIKPEAVKMVQVWR 127


  Database: scop70_1_75
    Posted date:  Mar 27, 2010  6:21 PM
  Number of letters in database: 2,407,596
  Number of sequences in database:  13,730
  
Lambda     K      H
   0.318    0.135    0.419 

Gapped
Lambda     K      H
   0.267   0.0598    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 13730
Number of Hits to DB: 723,903
Number of extensions: 31896
Number of successful extensions: 67
Number of sequences better than 10.0: 1
Number of HSP's gapped: 67
Number of HSP's successfully gapped: 4
Length of query: 189
Length of database: 2,407,596
Length adjustment: 80
Effective length of query: 109
Effective length of database: 1,309,196
Effective search space: 142702364
Effective search space used: 142702364
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 50 (23.3 bits)