RPS-BLAST 2.2.26 [Sep-21-2011]

Database: scop70_1_75 
           13,730 sequences; 2,407,596 total letters

Searching..................................................done

Query= psy6845
         (67 letters)



>d1v9da_ a.207.1.1 (A:) Diaphanous protein homolog 1, dia1 {Mouse
           (Mus musculus) [TaxId: 10090]}
          Length = 332

 Score = 22.6 bits (48), Expect = 4.9
 Identities = 8/35 (22%), Positives = 17/35 (48%)

Query: 26  EAFQHGITFQAKTRQKNKKEEKKKKEEEKKKREKM 60
             F   +    K R+  +K  + K  +EK ++E++
Sbjct: 298 NMFLQAVKENQKRRETEEKMRRAKLAKEKAEKERL 332


>d1lcla_ b.29.1.3 (A:) Charcot-Leyden crystal (CLC) protein {Human
          (Homo sapiens) [TaxId: 9606]}
          Length = 141

 Score = 22.6 bits (48), Expect = 5.0
 Identities = 5/46 (10%), Positives = 17/46 (36%)

Query: 3  SKKQQYNLVQQDEYDTRIPMHSEEAFQHGITFQAKTRQKNKKEEKK 48
              Q +   + + ++ I  H +  F   +   ++     K++ + 
Sbjct: 32 EPYLQVDFHTEMKEESDIVFHFQVCFGRRVVMNSREYGAWKQQVES 77


  Database: scop70_1_75
    Posted date:  Mar 27, 2010  6:21 PM
  Number of letters in database: 2,407,596
  Number of sequences in database:  13,730
  
Lambda     K      H
   0.304    0.120    0.319 

Gapped
Lambda     K      H
   0.267   0.0552    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 13730
Number of Hits to DB: 222,859
Number of extensions: 8297
Number of successful extensions: 100
Number of sequences better than 10.0: 1
Number of HSP's gapped: 84
Number of HSP's successfully gapped: 43
Length of query: 67
Length of database: 2,407,596
Length adjustment: 36
Effective length of query: 31
Effective length of database: 1,913,316
Effective search space: 59312796
Effective search space used: 59312796
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 43 (21.9 bits)
S2: 47 (22.3 bits)