Your job contains 1 sequence.
>psy6851
MTIQALKMRNQLSKQQPNLQFQHLNQLLPRRLNPALKLPFLPLPSIGRPSAVKLVDKETL
AKEKEAKRLAEAEKAAEKERKKAELAAAQEAKEAQKKIPPSEMFKMETDKYSQFDETVLP
PTVLTRVSEYIPEIVASYIEKIIANGLAYESNGSVYFNVNAFDSQPNHYYAKLVPEAYGD
TKTLQEGEVRGYPPWPARIEGLADETPNRLKYHIFFYGTRETGICRQDELFPYTEFKDKY
GKVRVHLSQKQQSLKLVVIMKEFFLNVKDHIRNLKFPATTVSSFEKWTQADLELSTRFIQ
TKNNVHAALCDNMDTRSALDSIRDCISQVNIYLRGTPNQLLLRDIGAYVTKILTVFGCIG
DVKNIGFPLGGTGVESTNLEELVLPYLTILSEFRDNIRTEARLIKSTEILNQCDRLRDEV
LPNVGVRLEDIEGKSYITFDILRRILSEYFNYNITYAMNITDIDDKIIKRARQNYLFEKH
VQENEIQTSKILKDIGEVMGAFESKMKLVTDPDKLTMMKNILSNVQEAKQDISAQPEGTI
NNIKNVTFQKLLTAVRDPFSDWLDSLHGSSITDNSIFATLPKHWEAEFHKDMADLNKLLT
AVRDPLSDWLDSLHGSSITDNSIFATLPKHWEAEFHKDMADLNVLPPTVLTRVSEYIPEI
VASAQTPKPAAAKKAESSSDDDSSSEDEKPAVKAPAKPVAHAAEPAAAKKAESSSDDDSS
SEDEKPAVKTPAKPVAQAAKPAAAKKAESSSDDDSSSEDEKPAVKAPAKPVAQAAKPGDL
SSQEASEKRSPNDFALWKKSKAGEPWWSSPWGEGRPGWHIECSVMASAVLGPQLDIHTGG
VDLKFPHHDNELAQAEGLPTHDQEGKELSKGLAKKLKKLQLTQEKKYNEYIASVQKATLH
GLLVCFCFQGLPTHDQEGKELSKGLAKKLKKLQLTQEKKYNEYIASVQ
The BLAST search returned 4 gene products which did not match your query constraints. Please see the full BLAST report below for the details.
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= psy6851
(948 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
FB|FBgn0027091 - symbol:Aats-cys "Cysteinyl-tRNA syntheta... 395 5.8e-69 3
RGD|1310747 - symbol:Cars "cysteinyl-tRNA synthetase" spe... 427 1.6e-68 3
UNIPROTKB|D4A452 - symbol:Cars "Cysteinyl-tRNA synthetase... 427 5.3e-68 3
MGI|MGI:1351477 - symbol:Cars "cysteinyl-tRNA synthetase"... 420 7.7e-67 3
UNIPROTKB|A4FUC8 - symbol:CARS "CARS protein" species:991... 420 6.8e-66 3
UNIPROTKB|F1RYA3 - symbol:CARS "Uncharacterized protein" ... 418 7.1e-66 3
UNIPROTKB|Q4R550 - symbol:CARS "Cysteine--tRNA ligase, cy... 408 7.1e-65 3
UNIPROTKB|F1PU34 - symbol:CARS "Uncharacterized protein" ... 412 7.9e-65 3
UNIPROTKB|Q291L4 - symbol:Aats-cys "Cysteine--tRNA ligase... 404 3.6e-64 3
UNIPROTKB|A8MVQ3 - symbol:CARS "Cysteinyl-tRNA synthetase... 401 5.0e-64 3
ZFIN|ZDB-GENE-030328-29 - symbol:cars "cysteinyl-tRNA syn... 413 5.0e-64 3
UNIPROTKB|P49589 - symbol:CARS "Cysteine--tRNA ligase, cy... 401 5.7e-64 3
UNIPROTKB|Q5M7N8 - symbol:cars "Cysteine--tRNA ligase, cy... 406 1.7e-63 3
UNIPROTKB|F1P1D9 - symbol:CARS "Cysteine--tRNA ligase, cy... 405 1.8e-63 3
UNIPROTKB|F1P1E0 - symbol:CARS "Cysteine--tRNA ligase, cy... 405 1.8e-63 3
UNIPROTKB|B4DKY1 - symbol:CARS "Cysteine--tRNA ligase, cy... 401 1.9e-63 2
UNIPROTKB|Q5F408 - symbol:CARS "Cysteine--tRNA ligase, cy... 405 2.0e-63 3
UNIPROTKB|Q7ZWR2 - symbol:cars "Cysteine--tRNA ligase, cy... 398 8.8e-62 3
UNIPROTKB|Q965I6 - symbol:cars-1 "Protein CARS-1, isoform... 334 3.1e-53 2
WB|WBGene00000800 - symbol:cars-1 species:6239 "Caenorhab... 334 3.1e-53 2
UNIPROTKB|O76618 - symbol:cars-1 "Protein CARS-1, isoform... 334 3.1e-53 2
UNIPROTKB|Q7S618 - symbol:NCU05642 "Putative uncharacteri... 327 2.7e-46 3
UNIPROTKB|Q752D6 - symbol:AGOS_AFR640W "AFR640Wp" species... 331 2.8e-46 2
ASPGD|ASPL0000073957 - symbol:sgdC species:162425 "Emeric... 316 3.4e-46 3
SGD|S000005191 - symbol:YNL247W "Cysteinyl-tRNA synthetas... 328 1.4e-45 2
CGD|CAL0006275 - symbol:orf19.4931 species:5476 "Candida ... 301 7.2e-45 3
POMBASE|SPAC29E6.06c - symbol:SPAC29E6.06c "cytoplasmic c... 313 1.5e-44 2
UNIPROTKB|Q5ASD0 - symbol:AN8800.2 "Putative uncharacteri... 316 2.1e-44 3
UNIPROTKB|A8IET6 - symbol:CHLREDRAFT_188223 "Predicted pr... 344 1.0e-43 3
DICTYBASE|DDB_G0287159 - symbol:cysS "cysteinyl-tRNA synt... 329 2.0e-43 3
UNIPROTKB|Q7RFT4 - symbol:PY04618 "Cysteinyl-tRNA synthet... 311 8.7e-39 2
UNIPROTKB|E9PT36 - symbol:RGD1311612 "Protein RGD1311612"... 299 1.4e-38 3
UNIPROTKB|D4A5T2 - symbol:RGD1311612 "Protein RGD1311612"... 299 1.4e-38 3
MGI|MGI:1919191 - symbol:Cars2 "cysteinyl-tRNA synthetase... 295 4.5e-38 3
UNIPROTKB|F1Q0T9 - symbol:CARS2 "Uncharacterized protein"... 292 4.5e-38 3
UNIPROTKB|F1MLA9 - symbol:CARS2 "Cysteine--tRNA ligase, m... 301 1.2e-37 3
UNIPROTKB|Q2KIF8 - symbol:CARS2 "Cysteine--tRNA ligase, m... 301 1.2e-37 3
GENEDB_PFALCIPARUM|PF10_0149 - symbol:PF10_0149 "cysteine... 312 4.1e-37 2
UNIPROTKB|Q8IJP3 - symbol:PF10_0149 "Cysteinyl-tRNA synth... 312 4.1e-37 2
UNIPROTKB|Q6DJ95 - symbol:cars2 "Probable cysteine--tRNA ... 308 5.6e-37 3
UNIPROTKB|Q9HA77 - symbol:CARS2 "Probable cysteine--tRNA ... 290 2.4e-36 3
TIGR_CMR|CBU_1487 - symbol:CBU_1487 "cysteinyl-tRNA synth... 307 9.3e-35 3
ZFIN|ZDB-GENE-030131-5564 - symbol:cars2 "cysteinyl-tRNA ... 305 2.4e-33 2
UNIPROTKB|Q7G2N5 - symbol:LOC_Os10g32570 "tRNA synthetase... 277 2.6e-32 3
UNIPROTKB|A9WD90 - symbol:cysS "Cysteine--tRNA ligase" sp... 295 5.8e-32 3
UNIPROTKB|F1PXG3 - symbol:CARS2 "Uncharacterized protein"... 292 1.1e-31 3
UNIPROTKB|Q9KQZ9 - symbol:cysS "Cysteine--tRNA ligase" sp... 289 1.4e-31 2
TIGR_CMR|VC_1848 - symbol:VC_1848 "cysteinyl-tRNA synthet... 289 1.4e-31 2
UNIPROTKB|A8JCV0 - symbol:CHLREDRAFT_153062 "Cysteinyl-tR... 288 1.5e-30 2
UNIPROTKB|F1P2P3 - symbol:CARS2 "Uncharacterized protein"... 289 1.9e-30 2
FB|FBgn0033900 - symbol:CG8257 species:7227 "Drosophila m... 260 2.3e-30 3
UNIPROTKB|Q9WZH8 - symbol:cysS "Cysteine--tRNA ligase" sp... 298 3.2e-30 3
UNIPROTKB|Q7NMB5 - symbol:cysS "Cysteine--tRNA ligase" sp... 289 4.3e-30 3
UNIPROTKB|A6V727 - symbol:cysS "Cysteine--tRNA ligase" sp... 286 7.9e-30 2
TAIR|locus:2152237 - symbol:AT5G38830 "AT5G38830" species... 280 1.4e-29 3
TAIR|locus:2042521 - symbol:SYCO ARATH "cysteinyl t-RNA s... 283 1.5e-29 2
TIGR_CMR|SO_1791 - symbol:SO_1791 "cysteinyl-tRNA synthet... 271 1.8e-29 3
UNIPROTKB|O67163 - symbol:cysS "Cysteine--tRNA ligase" sp... 285 2.3e-29 2
TIGR_CMR|DET_0061 - symbol:DET_0061 "cysteinyl-tRNA synth... 280 8.5e-29 2
UNIPROTKB|Q747A2 - symbol:cysS "Cysteine--tRNA ligase" sp... 287 1.8e-28 2
TIGR_CMR|GSU_3365 - symbol:GSU_3365 "cysteinyl-tRNA synth... 287 1.8e-28 2
UNIPROTKB|P21888 - symbol:cysS species:83333 "Escherichia... 270 2.8e-28 2
TIGR_CMR|CPS_3792 - symbol:CPS_3792 "cysteinyl-tRNA synth... 273 9.6e-28 2
UNIPROTKB|A9WG64 - symbol:cysS "Cysteine--tRNA ligase" sp... 255 9.7e-28 3
RGD|1311612 - symbol:Cars2 "cysteinyl-tRNA synthetase 2, ... 178 1.0e-27 3
TIGR_CMR|CHY_2338 - symbol:CHY_2338 "cysteinyl-tRNA synth... 287 1.3e-27 2
TIGR_CMR|BA_0089 - symbol:BA_0089 "cysteinyl-tRNA synthet... 283 2.0e-27 2
UNIPROTKB|Q9L0Q6 - symbol:cysS "Cysteine--tRNA ligase" sp... 278 5.3e-27 2
UNIPROTKB|Q0IZQ2 - symbol:Os09g0556500 "Os09g0556500 prot... 269 5.3e-27 2
UNIPROTKB|Q97WE6 - symbol:cysS "Cysteine--tRNA ligase" sp... 277 1.5e-26 2
UNIPROTKB|Q06752 - symbol:cysS "Cysteine--tRNA ligase" sp... 271 7.4e-26 2
UNIPROTKB|P0A634 - symbol:cysS "Cysteine--tRNA ligase" sp... 278 1.1e-25 3
TIGR_CMR|SPO_2131 - symbol:SPO_2131 "cysteinyl-tRNA synth... 253 1.4e-24 2
DICTYBASE|DDB_G0277295 - symbol:mcysS "putative mitochond... 233 1.3e-23 3
TIGR_CMR|NSE_0333 - symbol:NSE_0333 "cysteinyl-tRNA synth... 246 7.1e-23 3
UNIPROTKB|Q3KKR0 - symbol:cysS "Cysteine--tRNA ligase" sp... 240 1.7e-22 3
TIGR_CMR|APH_0555 - symbol:APH_0555 "cysteinyl-tRNA synth... 234 3.1e-22 3
UNIPROTKB|Q8A2F4 - symbol:cysS "Cysteine--tRNA ligase" sp... 231 7.0e-22 2
UNIPROTKB|Q9RTT6 - symbol:cysS "Cysteine--tRNA ligase" sp... 243 9.2e-22 2
UNIPROTKB|Q89NP8 - symbol:cysS "Cysteine--tRNA ligase" sp... 240 9.7e-22 2
UNIPROTKB|Q8TSP6 - symbol:cysS "Cysteine--tRNA ligase" sp... 245 3.4e-21 2
UNIPROTKB|Q8F525 - symbol:cysS "Cysteine--tRNA ligase" sp... 236 4.2e-21 2
TIGR_CMR|ECH_0768 - symbol:ECH_0768 "cysteinyl-tRNA synth... 224 3.3e-20 2
TAIR|locus:2078406 - symbol:AT3G56300 "AT3G56300" species... 219 1.9e-19 3
TIGR_CMR|CJE_0893 - symbol:CJE_0893 "cysteinyl-tRNA synth... 195 8.6e-18 3
UNIPROTKB|P67017 - symbol:mshC "L-cysteine:1D-myo-inosito... 198 7.1e-17 2
UNIPROTKB|Q9ADA4 - symbol:mshC "L-cysteine:1D-myo-inosito... 174 6.3e-13 2
UNIPROTKB|Q9Y3E1 - symbol:HDGFRP3 "Hepatoma-derived growt... 154 5.8e-10 1
MGI|MGI:1352760 - symbol:Hdgfrp3 "hepatoma-derived growth... 154 5.8e-10 1
RGD|628773 - symbol:Hdgfrp3 "hepatoma-derived growth fact... 154 5.8e-10 1
UNIPROTKB|E1BHR3 - symbol:HDGFRP3 "Uncharacterized protei... 153 7.4e-10 1
ZFIN|ZDB-GENE-050213-2 - symbol:hdgfrp3 "hepatoma-derived... 145 2.1e-08 1
MGI|MGI:1194492 - symbol:Hdgfrp2 "hepatoma-derived growth... 158 1.5e-07 2
RGD|621013 - symbol:Hdgfrp2 "hepatoma-derived growth fact... 158 2.0e-07 2
ZFIN|ZDB-GENE-050522-104 - symbol:psip1 "PC4 and SFRS1 in... 151 2.6e-07 1
UNIPROTKB|Q7Z4V5 - symbol:HDGFRP2 "Hepatoma-derived growt... 158 6.5e-07 2
UNIPROTKB|K7EQZ6 - symbol:HDGFRP2 "Hepatoma-derived growt... 158 6.6e-07 2
UNIPROTKB|I3L080 - symbol:HDGFRP2 "Hepatoma-derived growt... 158 6.6e-07 2
UNIPROTKB|F1S7K5 - symbol:LOC100526035 "Uncharacterized p... 158 8.0e-07 2
MGI|MGI:1194494 - symbol:Hdgf "hepatoma-derived growth fa... 140 8.5e-07 1
WARNING: Descriptions of 22 database sequences were not reported due to the
limiting value of parameter V = 100.
>FB|FBgn0027091 [details] [associations]
symbol:Aats-cys "Cysteinyl-tRNA synthetase" species:7227
"Drosophila melanogaster" [GO:0004817 "cysteine-tRNA ligase
activity" evidence=ISS;IBA;NAS] [GO:0006423 "cysteinyl-tRNA
aminoacylation" evidence=IBA;NAS] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0005829 "cytosol" evidence=IBA]
InterPro:IPR009080 InterPro:IPR015803 PROSITE:PS00178 Pfam:PF01406
EMBL:AE013599 GO:GO:0005829 GO:GO:0005524 GO:GO:0046872
GO:GO:0000049 Gene3D:3.40.50.620 InterPro:IPR014729 SUPFAM:SSF47323
eggNOG:COG0215 InterPro:IPR024909 PANTHER:PTHR10890 PRINTS:PR00983
GO:GO:0004817 GO:GO:0006423 KO:K01883 TIGRFAMs:TIGR00435
OMA:VARWFRH EMBL:AF132160 RefSeq:NP_611087.1 UniGene:Dm.1572
ProteinModelPortal:Q7KN90 SMR:Q7KN90 STRING:Q7KN90 PaxDb:Q7KN90
PRIDE:Q7KN90 EnsemblMetazoa:FBtr0087234 GeneID:36784
KEGG:dme:Dmel_CG8431 UCSC:CG8431-RA CTD:36784 FlyBase:FBgn0027091
GeneTree:ENSGT00390000006347 InParanoid:Q7KN90 OrthoDB:EOG4CFXQ9
PhylomeDB:Q7KN90 GenomeRNAi:36784 NextBio:800374 Bgee:Q7KN90
Uniprot:Q7KN90
Length = 741
Score = 395 (144.1 bits), Expect = 1.9e-60, Sum P(3) = 1.9e-60
Identities = 86/183 (46%), Positives = 120/183 (65%)
Query: 260 MKEFFLNVKDHIRNLKFPATTVSSFEKWTQADLELSTRFIQTKNNVHAALCDNMDTRSAL 319
+ EFFLNVKD R++ F+ WT+ + L +F + VHA+LCDN+DTRSAL
Sbjct: 451 LNEFFLNVKDLTRHV-LSEEPRRQFDAWTEVEAALQKKFSNAQVQVHASLCDNIDTRSAL 509
Query: 320 DSIRDCISQVNIYLRGTP---NQLLLRDIGAYVTKILTVFGCI-GDVKNIGFPL-GGTGV 374
D+IR+ +S N+Y+R N LLLR++ Y+T +L VFG I G IGFP+ GG+G
Sbjct: 510 DAIRELVSVSNVYIRDNKTRLNSLLLRNVATYITDLLHVFGAISGPRGGIGFPVSGGSGA 569
Query: 375 EST--NLEELVLPYLTILSEFRDNIRTEARLIKSTEILNQCDRLRDEVLPNVGVRLEDIE 432
++ +LE VLPY+ L+EFR +R +A+ +K+ +IL CD LRD VLPN+GVRLED +
Sbjct: 570 QAAGADLETTVLPYVQSLAEFRYLVREQAKTLKAFDILKLCDDLRDNVLPNLGVRLEDKD 629
Query: 433 -GK 434
GK
Sbjct: 630 IGK 632
Score = 385 (140.6 bits), Expect = 5.8e-69, Sum P(3) = 5.8e-69
Identities = 84/194 (43%), Positives = 118/194 (60%)
Query: 434 KSYITFDILRRILSEYFNYNITYAMNITDIDDKIIKRARQNYLFEKHVQE-NEIQTSKIL 492
+SYI+FDILRRILS+YF YNI Y MNITDIDDKII+RARQN+LF+++ E ++ ++L
Sbjct: 60 RSYISFDILRRILSDYFGYNIHYVMNITDIDDKIIRRARQNHLFDEYAAEAQKLPLDELL 119
Query: 493 KDIGEVMGAFESKMKLVTDPDKLTMMKNILSNVQEAKQDIS-AQPEGTINNIKNVTFQKL 551
EV+ F+ TDPDK M+ L + +A + ++ A +G I L
Sbjct: 120 GQQKEVLQRFQDTCAKNTDPDKKIMLDKTLQRMNDAVEALTKAVGKGDEREISEKRLLYL 179
Query: 552 LTAVRDPFSDWLDSLHGSSITDNSIFATLPKHWEAEFHKDMADLNKLLTAVRDPLSDWLD 611
A +DP SDWLDSL G+ I DN++F LP++WE +FH DM LN L V +S+++
Sbjct: 180 NEA-KDPISDWLDSLKGAQINDNAVFEALPRYWEDQFHNDMKSLNILPPDVLTRVSEYVP 238
Query: 612 SLHG--SSITDNSI 623
+ I DN +
Sbjct: 239 QIVTFIQKIIDNGL 252
Score = 365 (133.5 bits), Expect = 5.8e-69, Sum P(3) = 5.8e-69
Identities = 65/81 (80%), Positives = 68/81 (83%)
Query: 778 GDLSSQE--ASEKRSPNDFALWKKSKAGEPWWSSPWGEGRPGWHIECSVMASAVLGPQLD 835
GDLS E SEKRS NDFALWK SKAGEPWW SPWG+GRPGWHIECS MAS + GP D
Sbjct: 294 GDLSIAEDRLSEKRSANDFALWKASKAGEPWWDSPWGKGRPGWHIECSAMASDIFGPTFD 353
Query: 836 IHTGGVDLKFPHHDNELAQAE 856
IHTGGVDLKFPHHDNELAQ+E
Sbjct: 354 IHTGGVDLKFPHHDNELAQSE 374
Score = 272 (100.8 bits), Expect = 1.9e-60, Sum P(3) = 1.9e-60
Identities = 51/71 (71%), Positives = 62/71 (87%)
Query: 118 VLPPTVLTRVSEYIPEIVASYIEKIIANGLAYESNGSVYFNVNAFDSQPNHYYAKLVPEA 177
+LPP VLTRVSEY+P+IV ++I+KII NGLAY +N SVYF+VN FD + H+YAKLVPEA
Sbjct: 224 ILPPDVLTRVSEYVPQIV-TFIQKIIDNGLAYAANNSVYFDVNGFDKREKHHYAKLVPEA 282
Query: 178 YGDTKTLQEGE 188
YGDTK+LQEGE
Sbjct: 283 YGDTKSLQEGE 293
Score = 233 (87.1 bits), Expect = 9.1e-53, Sum P(3) = 9.1e-53
Identities = 39/63 (61%), Positives = 50/63 (79%)
Query: 599 LTAVRDPLSDWLDSLHGSSITDNSIFATLPKHWEAEFHKDMADLNVLPPTVLTRVSEYIP 658
L +DP+SDWLDSL G+ I DN++F LP++WE +FH DM LN+LPP VLTRVSEY+P
Sbjct: 179 LNEAKDPISDWLDSLKGAQINDNAVFEALPRYWEDQFHNDMKSLNILPPDVLTRVSEYVP 238
Query: 659 EIV 661
+IV
Sbjct: 239 QIV 241
Score = 70 (29.7 bits), Expect = 5.8e-69, Sum P(3) = 5.8e-69
Identities = 15/41 (36%), Positives = 19/41 (46%)
Query: 857 GLPTHDQEXXXXXXXXXXXXXXXXXXXXXXYNEYIASVQKA 897
GLPTHD+E YNEY+AS++KA
Sbjct: 701 GLPTHDKEGKEVSKGQIKKLQKLQQQQEQRYNEYLASIEKA 741
Score = 61 (26.5 bits), Expect = 5.1e-68, Sum P(3) = 5.1e-68
Identities = 13/39 (33%), Positives = 17/39 (43%)
Query: 910 GLPTHDQEXXXXXXXXXXXXXXXXXXXXXXYNEYIASVQ 948
GLPTHD+E YNEY+AS++
Sbjct: 701 GLPTHDKEGKEVSKGQIKKLQKLQQQQEQRYNEYLASIE 739
Score = 46 (21.3 bits), Expect = 1.2e-22, Sum P(3) = 1.2e-22
Identities = 19/79 (24%), Positives = 34/79 (43%)
Query: 276 FPATTVSSFEKWTQADLELSTR-FIQTKNNVHAALCDNMDTRSALDSIRDCISQVNIYLR 334
FP + S + ADLE + ++Q+ + + T A D ++ C + L
Sbjct: 561 FPVSGGSGAQA-AGADLETTVLPYVQSLAEFRYLVREQAKTLKAFDILKLCDDLRDNVLP 619
Query: 335 GTPNQLLLRDIGAYVTKIL 353
+L +DIG Y K++
Sbjct: 620 NLGVRLEDKDIGKYAVKLV 638
Score = 45 (20.9 bits), Expect = 1.6e-22, Sum P(3) = 1.6e-22
Identities = 13/39 (33%), Positives = 18/39 (46%)
Query: 376 STNLEELVLPYLTILSEFRDNIRTEARLIKSTEILNQCD 414
S N E+ Y L+EF N++ R + S E Q D
Sbjct: 437 SENTMEMATQYEKFLNEFFLNVKDLTRHVLSEEPRRQFD 475
>RGD|1310747 [details] [associations]
symbol:Cars "cysteinyl-tRNA synthetase" species:10116 "Rattus
norvegicus" [GO:0000049 "tRNA binding" evidence=IEA;ISO]
[GO:0004817 "cysteine-tRNA ligase activity" evidence=ISO;IBA]
[GO:0005524 "ATP binding" evidence=IEA;ISO] [GO:0005737 "cytoplasm"
evidence=ISO] [GO:0005829 "cytosol" evidence=IBA] [GO:0006423
"cysteinyl-tRNA aminoacylation" evidence=ISO;IBA] [GO:0042803
"protein homodimerization activity" evidence=IEA;ISO]
HAMAP:MF_00041 InterPro:IPR009080 InterPro:IPR015803 Pfam:PF01406
RGD:1310747 GO:GO:0005829 GO:GO:0005524 Gene3D:3.40.50.620
InterPro:IPR014729 SUPFAM:SSF47323 EMBL:CH473953 InterPro:IPR024909
PANTHER:PTHR10890 PRINTS:PR00983 GO:GO:0004817 GO:GO:0006423
CTD:833 KO:K01883 TIGRFAMs:TIGR00435 GeneTree:ENSGT00390000006347
UniGene:Rn.14865 RefSeq:NP_001099789.1 PRIDE:G3V9K0
Ensembl:ENSRNOT00000050721 GeneID:293638 KEGG:rno:293638
NextBio:636601 Uniprot:G3V9K0
Length = 748
Score = 427 (155.4 bits), Expect = 1.6e-68, Sum P(3) = 1.6e-68
Identities = 91/194 (46%), Positives = 126/194 (64%)
Query: 434 KSYITFDILRRILSEYFNYNITYAMNITDIDDKIIKRARQNYLFEKHVQENEIQTSKILK 493
+SYI+FDILRR+L +YF Y++ Y MNITDIDDKII+RARQNYLFE++ +E + +++LK
Sbjct: 69 RSYISFDILRRVLRDYFQYDVFYCMNITDIDDKIIRRARQNYLFEQY-REQKPSAAQLLK 127
Query: 494 DIGEVMGAFESKMKLVTDPDKLTMMKNILSNVQEA----KQDISAQPEGTINNIKNVTFQ 549
D+G+ M F K+ TDPDK M++ I ++V+ A +Q + + P G + + Q
Sbjct: 128 DVGDAMKPFSVKLSETTDPDKRQMLERIQNSVKLATEPLEQAVHSNPSG--EEVDS-RVQ 184
Query: 550 KLLTAVRDPFSDWLDSLHGSSITDNSIFATLPKHWEAEFHKDMADLNKLLTAVRDPLSDW 609
LL +D SDWLDS GS +TDNSIF+ LPK WE EFHKDM LN L V +S++
Sbjct: 185 VLLEEAKDLLSDWLDSTGGSEVTDNSIFSKLPKFWEEEFHKDMEALNVLPPDVLTRVSEY 244
Query: 610 LDSLHG--SSITDN 621
+ + I DN
Sbjct: 245 VPEIVNFVQKIVDN 258
Score = 404 (147.3 bits), Expect = 2.6e-55, Sum P(3) = 2.6e-55
Identities = 84/189 (44%), Positives = 116/189 (61%)
Query: 251 QQSLKLVVIMKEFFLNVKDHIRNLKFPATTVSSFEKWTQADLELSTRFIQTKNNVHAALC 310
+ +L+ M EFFLNVKD +R P FEKW ++EL+ F K VH ALC
Sbjct: 450 ESALQYEKFMNEFFLNVKDILRA---PVDITGQFEKWEAEEVELNKNFYDKKTAVHEALC 506
Query: 311 DNMDTRSALDSIRDCISQVNIYL------RGTPNQLLLRDIGAYVTKILTVFGCIGDVKN 364
DN+DTR+ ++ +R +SQ N+Y+ R PN+ LL +I Y+T +L +FG I +
Sbjct: 507 DNIDTRTVMEEMRALVSQCNLYMAARKAARRRPNRALLENIAMYLTHMLKIFGAIEEENP 566
Query: 365 IGFPLGGTGVESTNLEELVLPYLTILSEFRDNIRTEARLIKSTEILNQCDRLRDEVLPNV 424
+GFP+GG G + NLE V+PYL +LSEFR+ +R AR K E+L D LRD++LP +
Sbjct: 567 LGFPVGGPGT-NLNLESTVMPYLQVLSEFREGVRKIAREKKVLEVLQLSDALRDDILPEL 625
Query: 425 GVRLEDIEG 433
GVR ED EG
Sbjct: 626 GVRFEDHEG 634
Score = 329 (120.9 bits), Expect = 1.6e-68, Sum P(3) = 1.6e-68
Identities = 59/87 (67%), Positives = 67/87 (77%)
Query: 778 GDLS--SQEASEKRSPNDFALWKKSKAGEPWWSSPWGEGRPGWHIECSVMASAVLGPQLD 835
GDLS + SEKRSPNDFALWK SK GEP W PWG+GRPGWHIECS MA ++LG +D
Sbjct: 302 GDLSISADRLSEKRSPNDFALWKASKPGEPSWPCPWGKGRPGWHIECSAMAGSLLGASMD 361
Query: 836 IHTGGVDLKFPHHDNELAQAEGLPTHD 862
IH GG DL+FPHHDNELAQ+E +D
Sbjct: 362 IHGGGFDLRFPHHDNELAQSEAYFEND 388
Score = 245 (91.3 bits), Expect = 5.4e-48, Sum P(3) = 5.4e-48
Identities = 47/64 (73%), Positives = 51/64 (79%)
Query: 598 LLTAVRDPLSDWLDSLHGSSITDNSIFATLPKHWEAEFHKDMADLNVLPPTVLTRVSEYI 657
LL +D LSDWLDS GS +TDNSIF+ LPK WE EFHKDM LNVLPP VLTRVSEY+
Sbjct: 186 LLEEAKDLLSDWLDSTGGSEVTDNSIFSKLPKFWEEEFHKDMEALNVLPPDVLTRVSEYV 245
Query: 658 PEIV 661
PEIV
Sbjct: 246 PEIV 249
Score = 230 (86.0 bits), Expect = 2.6e-55, Sum P(3) = 2.6e-55
Identities = 45/71 (63%), Positives = 53/71 (74%)
Query: 118 VLPPTVLTRVSEYIPEIVASYIEKIIANGLAYESNGSVYFNVNAFDSQPNHYYAKLVPEA 177
VLPP VLTRVSEY+PEIV ++++KI+ NG Y SNGSVYF+ F + H Y KLVPEA
Sbjct: 232 VLPPDVLTRVSEYVPEIV-NFVQKIVDNGYGYASNGSVYFDTAKFAASEKHSYGKLVPEA 290
Query: 178 YGDTKTLQEGE 188
GD K LQEGE
Sbjct: 291 VGDQKALQEGE 301
Score = 53 (23.7 bits), Expect = 1.6e-68, Sum P(3) = 1.6e-68
Identities = 12/43 (27%), Positives = 16/43 (37%)
Query: 857 GLPTHDQEXXXXXXXXXXXXXXXXXXXXXXYNEYIASVQKATL 899
GLPTHD E Y EY+ +Q ++L
Sbjct: 705 GLPTHDTEGKELSKGQTKKLKKLFEAQEKVYKEYLQQLQNSSL 747
Score = 47 (21.6 bits), Expect = 6.9e-68, Sum P(3) = 6.9e-68
Identities = 11/39 (28%), Positives = 13/39 (33%)
Query: 910 GLPTHDQEXXXXXXXXXXXXXXXXXXXXXXYNEYIASVQ 948
GLPTHD E Y EY+ +Q
Sbjct: 705 GLPTHDTEGKELSKGQTKKLKKLFEAQEKVYKEYLQQLQ 743
>UNIPROTKB|D4A452 [details] [associations]
symbol:Cars "Cysteinyl-tRNA synthetase (Predicted), isoform
CRA_a" species:10116 "Rattus norvegicus" [GO:0004817 "cysteine-tRNA
ligase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0006423
"cysteinyl-tRNA aminoacylation" evidence=IEA] HAMAP:MF_00041
InterPro:IPR009080 InterPro:IPR015803 Pfam:PF01406 RGD:1310747
GO:GO:0005524 GO:GO:0005737 GO:GO:0000049 Gene3D:3.40.50.620
InterPro:IPR014729 SUPFAM:SSF47323 EMBL:CH473953 InterPro:IPR024909
PANTHER:PTHR10890 PRINTS:PR00983 GO:GO:0004817 GO:GO:0006423
TIGRFAMs:TIGR00435 OMA:VARWFRH OrthoDB:EOG473PQS IPI:IPI00371408
UniGene:Rn.14865 Ensembl:ENSRNOT00000028077 Uniprot:D4A452
Length = 831
Score = 427 (155.4 bits), Expect = 5.3e-68, Sum P(3) = 5.3e-68
Identities = 91/194 (46%), Positives = 126/194 (64%)
Query: 434 KSYITFDILRRILSEYFNYNITYAMNITDIDDKIIKRARQNYLFEKHVQENEIQTSKILK 493
+SYI+FDILRR+L +YF Y++ Y MNITDIDDKII+RARQNYLFE++ +E + +++LK
Sbjct: 152 RSYISFDILRRVLRDYFQYDVFYCMNITDIDDKIIRRARQNYLFEQY-REQKPSAAQLLK 210
Query: 494 DIGEVMGAFESKMKLVTDPDKLTMMKNILSNVQEA----KQDISAQPEGTINNIKNVTFQ 549
D+G+ M F K+ TDPDK M++ I ++V+ A +Q + + P G + + Q
Sbjct: 211 DVGDAMKPFSVKLSETTDPDKRQMLERIQNSVKLATEPLEQAVHSNPSG--EEVDS-RVQ 267
Query: 550 KLLTAVRDPFSDWLDSLHGSSITDNSIFATLPKHWEAEFHKDMADLNKLLTAVRDPLSDW 609
LL +D SDWLDS GS +TDNSIF+ LPK WE EFHKDM LN L V +S++
Sbjct: 268 VLLEEAKDLLSDWLDSTGGSEVTDNSIFSKLPKFWEEEFHKDMEALNVLPPDVLTRVSEY 327
Query: 610 LDSLHG--SSITDN 621
+ + I DN
Sbjct: 328 VPEIVNFVQKIVDN 341
Score = 404 (147.3 bits), Expect = 7.2e-55, Sum P(3) = 7.2e-55
Identities = 84/189 (44%), Positives = 116/189 (61%)
Query: 251 QQSLKLVVIMKEFFLNVKDHIRNLKFPATTVSSFEKWTQADLELSTRFIQTKNNVHAALC 310
+ +L+ M EFFLNVKD +R P FEKW ++EL+ F K VH ALC
Sbjct: 533 ESALQYEKFMNEFFLNVKDILRA---PVDITGQFEKWEAEEVELNKNFYDKKTAVHEALC 589
Query: 311 DNMDTRSALDSIRDCISQVNIYL------RGTPNQLLLRDIGAYVTKILTVFGCIGDVKN 364
DN+DTR+ ++ +R +SQ N+Y+ R PN+ LL +I Y+T +L +FG I +
Sbjct: 590 DNIDTRTVMEEMRALVSQCNLYMAARKAARRRPNRALLENIAMYLTHMLKIFGAIEEENP 649
Query: 365 IGFPLGGTGVESTNLEELVLPYLTILSEFRDNIRTEARLIKSTEILNQCDRLRDEVLPNV 424
+GFP+GG G + NLE V+PYL +LSEFR+ +R AR K E+L D LRD++LP +
Sbjct: 650 LGFPVGGPGT-NLNLESTVMPYLQVLSEFREGVRKIAREKKVLEVLQLSDALRDDILPEL 708
Query: 425 GVRLEDIEG 433
GVR ED EG
Sbjct: 709 GVRFEDHEG 717
Score = 329 (120.9 bits), Expect = 5.3e-68, Sum P(3) = 5.3e-68
Identities = 59/87 (67%), Positives = 67/87 (77%)
Query: 778 GDLS--SQEASEKRSPNDFALWKKSKAGEPWWSSPWGEGRPGWHIECSVMASAVLGPQLD 835
GDLS + SEKRSPNDFALWK SK GEP W PWG+GRPGWHIECS MA ++LG +D
Sbjct: 385 GDLSISADRLSEKRSPNDFALWKASKPGEPSWPCPWGKGRPGWHIECSAMAGSLLGASMD 444
Query: 836 IHTGGVDLKFPHHDNELAQAEGLPTHD 862
IH GG DL+FPHHDNELAQ+E +D
Sbjct: 445 IHGGGFDLRFPHHDNELAQSEAYFEND 471
Score = 245 (91.3 bits), Expect = 1.1e-47, Sum P(3) = 1.1e-47
Identities = 47/64 (73%), Positives = 51/64 (79%)
Query: 598 LLTAVRDPLSDWLDSLHGSSITDNSIFATLPKHWEAEFHKDMADLNVLPPTVLTRVSEYI 657
LL +D LSDWLDS GS +TDNSIF+ LPK WE EFHKDM LNVLPP VLTRVSEY+
Sbjct: 269 LLEEAKDLLSDWLDSTGGSEVTDNSIFSKLPKFWEEEFHKDMEALNVLPPDVLTRVSEYV 328
Query: 658 PEIV 661
PEIV
Sbjct: 329 PEIV 332
Score = 230 (86.0 bits), Expect = 7.2e-55, Sum P(3) = 7.2e-55
Identities = 45/71 (63%), Positives = 53/71 (74%)
Query: 118 VLPPTVLTRVSEYIPEIVASYIEKIIANGLAYESNGSVYFNVNAFDSQPNHYYAKLVPEA 177
VLPP VLTRVSEY+PEIV ++++KI+ NG Y SNGSVYF+ F + H Y KLVPEA
Sbjct: 315 VLPPDVLTRVSEYVPEIV-NFVQKIVDNGYGYASNGSVYFDTAKFAASEKHSYGKLVPEA 373
Query: 178 YGDTKTLQEGE 188
GD K LQEGE
Sbjct: 374 VGDQKALQEGE 384
Score = 53 (23.7 bits), Expect = 5.3e-68, Sum P(3) = 5.3e-68
Identities = 12/43 (27%), Positives = 16/43 (37%)
Query: 857 GLPTHDQEXXXXXXXXXXXXXXXXXXXXXXYNEYIASVQKATL 899
GLPTHD E Y EY+ +Q ++L
Sbjct: 788 GLPTHDTEGKELSKGQTKKLKKLFEAQEKVYKEYLQQLQNSSL 830
Score = 47 (21.6 bits), Expect = 2.3e-67, Sum P(3) = 2.3e-67
Identities = 11/39 (28%), Positives = 13/39 (33%)
Query: 910 GLPTHDQEXXXXXXXXXXXXXXXXXXXXXXYNEYIASVQ 948
GLPTHD E Y EY+ +Q
Sbjct: 788 GLPTHDTEGKELSKGQTKKLKKLFEAQEKVYKEYLQQLQ 826
>MGI|MGI:1351477 [details] [associations]
symbol:Cars "cysteinyl-tRNA synthetase" species:10090 "Mus
musculus" [GO:0000049 "tRNA binding" evidence=ISO] [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0004812 "aminoacyl-tRNA
ligase activity" evidence=IEA] [GO:0004817 "cysteine-tRNA ligase
activity" evidence=ISO;IBA] [GO:0005524 "ATP binding" evidence=ISO]
[GO:0005737 "cytoplasm" evidence=ISO] [GO:0005829 "cytosol"
evidence=IBA] [GO:0006412 "translation" evidence=IEA] [GO:0006418
"tRNA aminoacylation for protein translation" evidence=IEA]
[GO:0006423 "cysteinyl-tRNA aminoacylation" evidence=ISO;IBA]
[GO:0016874 "ligase activity" evidence=IEA] [GO:0042803 "protein
homodimerization activity" evidence=ISO] [GO:0046872 "metal ion
binding" evidence=IEA] InterPro:IPR009080 InterPro:IPR015803
PROSITE:PS00178 EMBL:AB015589 Pfam:PF01406 MGI:MGI:1351477
GO:GO:0005829 GO:GO:0005524 GO:GO:0046872 GO:GO:0000049
Gene3D:3.40.50.620 InterPro:IPR014729 SUPFAM:SSF47323
eggNOG:COG0215 InterPro:IPR024909 PANTHER:PTHR10890 PRINTS:PR00983
GO:GO:0004817 GO:GO:0006423 EMBL:AJ276505 CTD:833
HOVERGEN:HBG002089 KO:K01883 TIGRFAMs:TIGR00435 OMA:VARWFRH
GeneTree:ENSGT00390000006347 OrthoDB:EOG473PQS ChiTaRS:CARS
EMBL:AJ276796 EMBL:AK033328 EMBL:AK037227 EMBL:AK077558
EMBL:BC030473 EMBL:BC054717 EMBL:BC058954 IPI:IPI00331422
IPI:IPI00410740 RefSeq:NP_001239522.1 RefSeq:NP_038770.3
UniGene:Mm.125659 ProteinModelPortal:Q9ER72 SMR:Q9ER72
STRING:Q9ER72 PhosphoSite:Q9ER72 PaxDb:Q9ER72 PRIDE:Q9ER72
Ensembl:ENSMUST00000010899 Ensembl:ENSMUST00000105909 GeneID:27267
KEGG:mmu:27267 UCSC:uc009kpn.1 InParanoid:Q9ER72 NextBio:305168
Bgee:Q9ER72 CleanEx:MM_CARS Genevestigator:Q9ER72
GermOnline:ENSMUSG00000010755 Uniprot:Q9ER72
Length = 831
Score = 420 (152.9 bits), Expect = 7.7e-67, Sum P(3) = 7.7e-67
Identities = 87/191 (45%), Positives = 124/191 (64%)
Query: 434 KSYITFDILRRILSEYFNYNITYAMNITDIDDKIIKRARQNYLFEKHVQENEIQTSKILK 493
+SYI+FDILRR+L +YF Y++ Y MNITDIDDKII+RARQNYLFE++ +E + +++LK
Sbjct: 152 RSYISFDILRRVLRDYFQYDVFYCMNITDIDDKIIRRARQNYLFEQY-REQKPPATQLLK 210
Query: 494 DIGEVMGAFESKMKLVTDPDKLTMMKNILSNVQEAKQDISAQPEGTINNIK-NVTFQKLL 552
D+ + M F K+ TDPDK M++ I ++V+ A + + +++ + + Q LL
Sbjct: 211 DVRDAMKPFSVKLSETTDPDKRQMLERIQNSVKLATEPLEQAVRSSLSGEEVDSKVQVLL 270
Query: 553 TAVRDPFSDWLDSLHGSSITDNSIFATLPKHWEAEFHKDMADLNKLLTAVRDPLSDWLDS 612
+D SDWLDS GS +TDNSIF+ LPK WE EFHKDM LN L V +S+++
Sbjct: 271 EEAKDLLSDWLDSTGGSEVTDNSIFSKLPKFWEEEFHKDMEALNVLPPDVLTRVSEYVPE 330
Query: 613 LHG--SSITDN 621
+ I DN
Sbjct: 331 IVNFVQKIVDN 341
Score = 402 (146.6 bits), Expect = 2.0e-54, Sum P(3) = 2.0e-54
Identities = 84/189 (44%), Positives = 116/189 (61%)
Query: 251 QQSLKLVVIMKEFFLNVKDHIRNLKFPATTVSSFEKWTQADLELSTRFIQTKNNVHAALC 310
+ +L+ M EFFLNVKD +R P FEKW ++EL+ F K VH ALC
Sbjct: 533 ESALQYEKFMNEFFLNVKDILRA---PVDITGQFEKWEAEEVELNKNFYGKKTAVHEALC 589
Query: 311 DNMDTRSALDSIRDCISQVNIYL------RGTPNQLLLRDIGAYVTKILTVFGCIGDVKN 364
DN+DTR+ ++ +R +SQ N+Y+ R PN+ LL +I Y+T +L +FG I +
Sbjct: 590 DNIDTRTVMEEMRALVSQCNLYMAARKAERRRPNRALLENIAMYLTHMLKIFGAIEEESP 649
Query: 365 IGFPLGGTGVESTNLEELVLPYLTILSEFRDNIRTEARLIKSTEILNQCDRLRDEVLPNV 424
+GFP+GG G + NLE V+PYL +LSEFR+ +R AR K E+L D LRD++LP +
Sbjct: 650 LGFPVGGPGT-NLNLESTVMPYLQVLSEFREGVRKIAREKKVLEVLQLSDALRDDILPEL 708
Query: 425 GVRLEDIEG 433
GVR ED EG
Sbjct: 709 GVRFEDHEG 717
Score = 328 (120.5 bits), Expect = 7.7e-67, Sum P(3) = 7.7e-67
Identities = 59/87 (67%), Positives = 66/87 (75%)
Query: 778 GDLS--SQEASEKRSPNDFALWKKSKAGEPWWSSPWGEGRPGWHIECSVMASAVLGPQLD 835
GDLS + SEKRSPNDFALWK SK GEP W PWG+GRPGWHIECS MA +LG +D
Sbjct: 385 GDLSISADRLSEKRSPNDFALWKASKPGEPSWPCPWGKGRPGWHIECSAMAGTLLGASMD 444
Query: 836 IHTGGVDLKFPHHDNELAQAEGLPTHD 862
IH GG DL+FPHHDNELAQ+E +D
Sbjct: 445 IHGGGFDLRFPHHDNELAQSEAYFEND 471
Score = 245 (91.3 bits), Expect = 2.3e-47, Sum P(3) = 2.3e-47
Identities = 47/64 (73%), Positives = 51/64 (79%)
Query: 598 LLTAVRDPLSDWLDSLHGSSITDNSIFATLPKHWEAEFHKDMADLNVLPPTVLTRVSEYI 657
LL +D LSDWLDS GS +TDNSIF+ LPK WE EFHKDM LNVLPP VLTRVSEY+
Sbjct: 269 LLEEAKDLLSDWLDSTGGSEVTDNSIFSKLPKFWEEEFHKDMEALNVLPPDVLTRVSEYV 328
Query: 658 PEIV 661
PEIV
Sbjct: 329 PEIV 332
Score = 230 (86.0 bits), Expect = 2.0e-54, Sum P(3) = 2.0e-54
Identities = 45/71 (63%), Positives = 53/71 (74%)
Query: 118 VLPPTVLTRVSEYIPEIVASYIEKIIANGLAYESNGSVYFNVNAFDSQPNHYYAKLVPEA 177
VLPP VLTRVSEY+PEIV ++++KI+ NG Y SNGSVYF+ F + H Y KLVPEA
Sbjct: 315 VLPPDVLTRVSEYVPEIV-NFVQKIVDNGYGYASNGSVYFDTAKFAASEKHSYGKLVPEA 373
Query: 178 YGDTKTLQEGE 188
GD K LQEGE
Sbjct: 374 VGDQKALQEGE 384
Score = 51 (23.0 bits), Expect = 7.7e-67, Sum P(3) = 7.7e-67
Identities = 12/43 (27%), Positives = 15/43 (34%)
Query: 857 GLPTHDQEXXXXXXXXXXXXXXXXXXXXXXYNEYIASVQKATL 899
GLPTHD E Y EY+ +Q +L
Sbjct: 788 GLPTHDTEGKELSKGQAKKLKKLFEAQEKLYKEYLQMLQNGSL 830
Score = 46 (21.3 bits), Expect = 2.6e-66, Sum P(3) = 2.6e-66
Identities = 11/39 (28%), Positives = 13/39 (33%)
Query: 910 GLPTHDQEXXXXXXXXXXXXXXXXXXXXXXYNEYIASVQ 948
GLPTHD E Y EY+ +Q
Sbjct: 788 GLPTHDTEGKELSKGQAKKLKKLFEAQEKLYKEYLQMLQ 826
>UNIPROTKB|A4FUC8 [details] [associations]
symbol:CARS "CARS protein" species:9913 "Bos taurus"
[GO:0006423 "cysteinyl-tRNA aminoacylation" evidence=ISS]
[GO:0005829 "cytosol" evidence=ISS] [GO:0004817 "cysteine-tRNA
ligase activity" evidence=ISS] [GO:0042803 "protein
homodimerization activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0000049 "tRNA binding" evidence=IEA]
HAMAP:MF_00041 InterPro:IPR009080 InterPro:IPR015803 Pfam:PF01406
GO:GO:0005829 GO:GO:0005524 GO:GO:0000049 Gene3D:3.40.50.620
InterPro:IPR014729 SUPFAM:SSF47323 eggNOG:COG0215
InterPro:IPR024909 PANTHER:PTHR10890 PRINTS:PR00983 GO:GO:0004817
GO:GO:0006423 CTD:833 HOGENOM:HOG000245252 HOVERGEN:HBG002089
KO:K01883 TIGRFAMs:TIGR00435 OMA:VARWFRH
GeneTree:ENSGT00390000006347 EMBL:DAAA02063702 EMBL:DAAA02063703
EMBL:BC114705 IPI:IPI00841630 RefSeq:NP_001096719.1
UniGene:Bt.37070 STRING:A4FUC8 Ensembl:ENSBTAT00000014273
GeneID:515715 KEGG:bta:515715 InParanoid:A4FUC8 NextBio:20871972
Uniprot:A4FUC8
Length = 832
Score = 420 (152.9 bits), Expect = 6.8e-66, Sum P(3) = 6.8e-66
Identities = 86/191 (45%), Positives = 123/191 (64%)
Query: 434 KSYITFDILRRILSEYFNYNITYAMNITDIDDKIIKRARQNYLFEKHVQENEIQTSKILK 493
+SYI+FDILRR+L +YF +++ Y MNITDIDDKIIKRARQN+L E++ +E + Q +++L+
Sbjct: 153 RSYISFDILRRVLRDYFKFDVFYCMNITDIDDKIIKRARQNFLLERY-RETQPQAAQLLE 211
Query: 494 DIGEVMGAFESKMKLVTDPDKLTMMKNILSNVQEAKQDIS-AQPEGTINNIKNVTFQKLL 552
D+ + F +K++ DPDK M++ + V +A + + A G + Q LL
Sbjct: 212 DVRAALQPFSAKLQETVDPDKKQMLERLQHAVAQAAEPLEGALRAGQAGQELDGRVQALL 271
Query: 553 TAVRDPFSDWLDSLHGSSITDNSIFATLPKHWEAEFHKDMADLNKLLTAVRDPLSDWLDS 612
+D SDWLDS+HGS +TDNSIF+ LPK WEAEFHKDM LN L V +S+++
Sbjct: 272 EEAKDVLSDWLDSMHGSEVTDNSIFSELPKFWEAEFHKDMEALNVLPPDVLTRVSEYVPE 331
Query: 613 LHG--SSITDN 621
+ I DN
Sbjct: 332 IVDFVQKIVDN 342
Score = 402 (146.6 bits), Expect = 1.6e-52, Sum P(3) = 1.6e-52
Identities = 84/189 (44%), Positives = 118/189 (62%)
Query: 251 QQSLKLVVIMKEFFLNVKDHIRNLKFPATTVSSFEKWTQADLELSTRFIQTKNNVHAALC 310
+ +L+ ++ EFFLNVKD +R P + FEKW + EL+ F + K VH ALC
Sbjct: 534 ESALQYERLLNEFFLNVKDLLRA---PVEVAAQFEKWEDEETELNKSFYKKKAAVHQALC 590
Query: 311 DNMDTRSALDSIRDCISQVNIYL------RGTPNQLLLRDIGAYVTKILTVFGCIGDVKN 364
DN+DTR+ L+ +R + Q N+Y+ R P+++LL I Y+T +L +FG I + +
Sbjct: 591 DNIDTRTVLEEMRALVGQCNLYMAARKAARRRPHRVLLESIAHYLTHMLKIFGAIEEESS 650
Query: 365 IGFPLGGTGVESTNLEELVLPYLTILSEFRDNIRTEARLIKSTEILNQCDRLRDEVLPNV 424
+GFP+GG G S NLE V+PYL +LSEFR+ +R AR + E+L D LRD VLP +
Sbjct: 651 LGFPIGGAGT-SLNLESTVMPYLQVLSEFREGVRRIAREHRVPEVLQLSDALRDNVLPEL 709
Query: 425 GVRLEDIEG 433
GVRLED EG
Sbjct: 710 GVRLEDHEG 718
Score = 330 (121.2 bits), Expect = 6.8e-66, Sum P(3) = 6.8e-66
Identities = 59/87 (67%), Positives = 67/87 (77%)
Query: 778 GDLS--SQEASEKRSPNDFALWKKSKAGEPWWSSPWGEGRPGWHIECSVMASAVLGPQLD 835
GDLS ++ SEKRSPNDFALWK SK GEP W PWG+GRPGWHIECS MA +LG +D
Sbjct: 386 GDLSVSAERLSEKRSPNDFALWKASKPGEPSWPCPWGKGRPGWHIECSAMAGTLLGASMD 445
Query: 836 IHTGGVDLKFPHHDNELAQAEGLPTHD 862
IH GG DL+FPHHDNELAQ+E +D
Sbjct: 446 IHGGGFDLRFPHHDNELAQSEAYFEND 472
Score = 264 (98.0 bits), Expect = 2.0e-48, Sum P(3) = 2.0e-48
Identities = 49/64 (76%), Positives = 54/64 (84%)
Query: 598 LLTAVRDPLSDWLDSLHGSSITDNSIFATLPKHWEAEFHKDMADLNVLPPTVLTRVSEYI 657
LL +D LSDWLDS+HGS +TDNSIF+ LPK WEAEFHKDM LNVLPP VLTRVSEY+
Sbjct: 270 LLEEAKDVLSDWLDSMHGSEVTDNSIFSELPKFWEAEFHKDMEALNVLPPDVLTRVSEYV 329
Query: 658 PEIV 661
PEIV
Sbjct: 330 PEIV 333
Score = 223 (83.6 bits), Expect = 1.6e-52, Sum P(3) = 1.6e-52
Identities = 48/90 (53%), Positives = 59/90 (65%)
Query: 101 SEMFKM-ETDKYSQFDE-TVLPPTVLTRVSEYIPEIVASYIEKIIANGLAYESNGSVYFN 158
SE+ K E + + + VLPP VLTRVSEY+PEIV +++KI+ NG Y SNGSVYF+
Sbjct: 297 SELPKFWEAEFHKDMEALNVLPPDVLTRVSEYVPEIV-DFVQKIVDNGYGYASNGSVYFD 355
Query: 159 VNAFDSQPNHYYAKLVPEAYGDTKTLQEGE 188
F + H Y KLVPEA GD K L EGE
Sbjct: 356 TVKFANTEGHSYGKLVPEAVGDQKALHEGE 385
Score = 46 (21.3 bits), Expect = 6.8e-14, Sum P(3) = 6.8e-14
Identities = 14/44 (31%), Positives = 21/44 (47%)
Query: 376 STNLEELVLPYLTILSEFRDNIRTEARLIKSTEILNQCDRLRDE 419
S N E L Y +L+EF N++ R E+ Q ++ DE
Sbjct: 529 SANTMESALQYERLLNEFFLNVKDLLRA--PVEVAAQFEKWEDE 570
Score = 40 (19.1 bits), Expect = 6.8e-66, Sum P(3) = 6.8e-66
Identities = 7/8 (87%), Positives = 7/8 (87%)
Query: 857 GLPTHDQE 864
GLPTHD E
Sbjct: 789 GLPTHDTE 796
Score = 40 (19.1 bits), Expect = 6.8e-66, Sum P(3) = 6.8e-66
Identities = 7/8 (87%), Positives = 7/8 (87%)
Query: 910 GLPTHDQE 917
GLPTHD E
Sbjct: 789 GLPTHDTE 796
Score = 40 (19.1 bits), Expect = 2.8e-13, Sum P(3) = 2.8e-13
Identities = 13/45 (28%), Positives = 22/45 (48%)
Query: 376 STNLEELVLPYLTILSEFRDNIRTEARLIKSTEILNQC-DRLRDE 419
S L + VLP L + E + + T +L+ +L + D+ R E
Sbjct: 698 SDALRDNVLPELGVRLEDHEGLPTVVKLVDRDALLREREDKKRAE 742
>UNIPROTKB|F1RYA3 [details] [associations]
symbol:CARS "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0042803 "protein homodimerization activity"
evidence=IEA] [GO:0006423 "cysteinyl-tRNA aminoacylation"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] [GO:0004817 "cysteine-tRNA ligase
activity" evidence=IEA] [GO:0000049 "tRNA binding" evidence=IEA]
HAMAP:MF_00041 InterPro:IPR009080 InterPro:IPR015803 Pfam:PF01406
GO:GO:0005524 GO:GO:0005737 GO:GO:0000049 Gene3D:3.40.50.620
InterPro:IPR014729 SUPFAM:SSF47323 InterPro:IPR024909
PANTHER:PTHR10890 PRINTS:PR00983 GO:GO:0004817 GO:GO:0006423
TIGRFAMs:TIGR00435 OMA:VARWFRH GeneTree:ENSGT00390000006347
EMBL:FP102729 Ensembl:ENSSSCT00000014053 Uniprot:F1RYA3
Length = 829
Score = 418 (152.2 bits), Expect = 7.1e-66, Sum P(3) = 7.1e-66
Identities = 82/181 (45%), Positives = 119/181 (65%)
Query: 434 KSYITFDILRRILSEYFNYNITYAMNITDIDDKIIKRARQNYLFEKHVQENEIQTSKILK 493
+SY++FDILRR+L +YF +++ Y MNITD+DDKII+RARQNYLFE++ +E + +++L+
Sbjct: 151 RSYVSFDILRRVLRDYFRFDVFYCMNITDVDDKIIRRARQNYLFERY-REKQPSAAQLLE 209
Query: 494 DIGEVMGAFESKMKLVTDPDKLTMMKNILSNVQEAKQDIS-AQPEGTINNIKNVTFQKLL 552
D+ + F +K+K TDPDK M++ + V A + + A + + Q LL
Sbjct: 210 DVHAALQPFAAKLKETTDPDKKQMLERLERAVTRAAEPLEEAVRASLVGEELDGRVQVLL 269
Query: 553 TAVRDPFSDWLDSLHGSSITDNSIFATLPKHWEAEFHKDMADLNKLLTAVRDPLSDWLDS 612
+D SDWLDS HGS +TDNSIF+ LPK WEAEFHKDM LN L V +S+++
Sbjct: 270 AEAKDLLSDWLDSTHGSEVTDNSIFSQLPKFWEAEFHKDMEALNVLPPDVLTRVSEYVPE 329
Query: 613 L 613
+
Sbjct: 330 I 330
Score = 390 (142.3 bits), Expect = 1.9e-51, Sum P(3) = 1.9e-51
Identities = 83/189 (43%), Positives = 116/189 (61%)
Query: 251 QQSLKLVVIMKEFFLNVKDHIRNLKFPATTVSSFEKWTQADLELSTRFIQTKNNVHAALC 310
+ +L+ + EFFLNVKD +R P FEKW + + EL+ F K VH ALC
Sbjct: 532 ESALQYERFLNEFFLNVKDLLRA---PGDVTGQFEKWEREETELNKCFYDKKAAVHEALC 588
Query: 311 DNMDTRSALDSIRDCISQVNIYL------RGTPNQLLLRDIGAYVTKILTVFGCIGDVKN 364
DN+DTR+AL+ +R +SQ N+Y R PN+ LL + Y+T +L +FG I +
Sbjct: 589 DNVDTRTALEEMRALVSQCNLYTAARKAARRRPNRALLASVANYLTHMLKIFGAIEEESP 648
Query: 365 IGFPLGGTGVESTNLEELVLPYLTILSEFRDNIRTEARLIKSTEILNQCDRLRDEVLPNV 424
+GFP+G G S +LE V+PYL +LSEFR+ +R+ AR + E+L D LRD++LP +
Sbjct: 649 LGFPVGAPGT-SLSLESTVMPYLQVLSEFREGVRSIARERRVPEVLQLSDALRDDILPEL 707
Query: 425 GVRLEDIEG 433
GVRLED EG
Sbjct: 708 GVRLEDHEG 716
Score = 329 (120.9 bits), Expect = 7.1e-66, Sum P(3) = 7.1e-66
Identities = 59/87 (67%), Positives = 66/87 (75%)
Query: 778 GDLS--SQEASEKRSPNDFALWKKSKAGEPWWSSPWGEGRPGWHIECSVMASAVLGPQLD 835
GDLS ++ SEKRSPNDFALWK SK GEP W PWG GRPGWHIECS MA +LG +D
Sbjct: 384 GDLSISAERLSEKRSPNDFALWKASKPGEPSWPCPWGRGRPGWHIECSAMAGTLLGASMD 443
Query: 836 IHTGGVDLKFPHHDNELAQAEGLPTHD 862
IH GG DL+FPHHDNELAQ+E +D
Sbjct: 444 IHGGGFDLRFPHHDNELAQSEAYFEND 470
Score = 261 (96.9 bits), Expect = 2.6e-48, Sum P(3) = 2.6e-48
Identities = 49/64 (76%), Positives = 53/64 (82%)
Query: 598 LLTAVRDPLSDWLDSLHGSSITDNSIFATLPKHWEAEFHKDMADLNVLPPTVLTRVSEYI 657
LL +D LSDWLDS HGS +TDNSIF+ LPK WEAEFHKDM LNVLPP VLTRVSEY+
Sbjct: 268 LLAEAKDLLSDWLDSTHGSEVTDNSIFSQLPKFWEAEFHKDMEALNVLPPDVLTRVSEYV 327
Query: 658 PEIV 661
PEIV
Sbjct: 328 PEIV 331
Score = 223 (83.6 bits), Expect = 1.9e-51, Sum P(3) = 1.9e-51
Identities = 44/71 (61%), Positives = 52/71 (73%)
Query: 118 VLPPTVLTRVSEYIPEIVASYIEKIIANGLAYESNGSVYFNVNAFDSQPNHYYAKLVPEA 177
VLPP VLTRVSEY+PEIV +++KI+ NG Y SNGSVYF+ F + H Y KLVPEA
Sbjct: 314 VLPPDVLTRVSEYVPEIV-DFVQKIMDNGYGYASNGSVYFDTVKFANSEGHCYGKLVPEA 372
Query: 178 YGDTKTLQEGE 188
GD + LQEGE
Sbjct: 373 VGDQRALQEGE 383
Score = 49 (22.3 bits), Expect = 1.6e-14, Sum P(3) = 1.6e-14
Identities = 30/127 (23%), Positives = 55/127 (43%)
Query: 434 KSYITF-DILRRILSEYFNYN-ITYAMNIT-DIDDKIIKRARQNYLFEKHVQENEIQTSK 490
K++IT D L++ + + +A T D ++ A Q +E+ + E +
Sbjct: 494 KNFITIKDALKKHSARQLRLAFLMHAWKDTLDYSSNTMESALQ---YERFLNEFFLNVKD 550
Query: 491 ILKDIGEVMGAFESKMKLVTDPDKLTMMKNILSNVQEAKQDISAQPEGTINNIKNVTFQ- 549
+L+ G+V G FE + T+ +K K + V EA D + + ++ + Q
Sbjct: 551 LLRAPGDVTGQFEKWEREETELNKCFYDKK--AAVHEALCD-NVDTRTALEEMRALVSQC 607
Query: 550 KLLTAVR 556
L TA R
Sbjct: 608 NLYTAAR 614
Score = 43 (20.2 bits), Expect = 7.1e-66, Sum P(3) = 7.1e-66
Identities = 11/39 (28%), Positives = 13/39 (33%)
Query: 857 GLPTHDQEXXXXXXXXXXXXXXXXXXXXXXYNEYIASVQ 895
GLPTHD E + EY+ VQ
Sbjct: 786 GLPTHDAEGKELSKGQAKKLKKLFEAQEKLHKEYLQLVQ 824
Score = 43 (20.2 bits), Expect = 7.1e-66, Sum P(3) = 7.1e-66
Identities = 11/39 (28%), Positives = 13/39 (33%)
Query: 910 GLPTHDQEXXXXXXXXXXXXXXXXXXXXXXYNEYIASVQ 948
GLPTHD E + EY+ VQ
Sbjct: 786 GLPTHDAEGKELSKGQAKKLKKLFEAQEKLHKEYLQLVQ 824
Score = 37 (18.1 bits), Expect = 2.7e-13, Sum P(3) = 2.7e-13
Identities = 9/23 (39%), Positives = 13/23 (56%)
Query: 376 STNLEELVLPYLTILSEFRDNIR 398
S+N E L Y L+EF N++
Sbjct: 527 SSNTMESALQYERFLNEFFLNVK 549
>UNIPROTKB|Q4R550 [details] [associations]
symbol:CARS "Cysteine--tRNA ligase, cytoplasmic"
species:9541 "Macaca fascicularis" [GO:0000049 "tRNA binding"
evidence=ISS] [GO:0004817 "cysteine-tRNA ligase activity"
evidence=ISS] [GO:0005737 "cytoplasm" evidence=ISS] [GO:0006423
"cysteinyl-tRNA aminoacylation" evidence=ISS] InterPro:IPR009080
InterPro:IPR015803 PROSITE:PS00178 Pfam:PF01406 GO:GO:0005524
GO:GO:0005737 GO:GO:0046872 GO:GO:0000049 Gene3D:3.40.50.620
InterPro:IPR014729 SUPFAM:SSF47323 InterPro:IPR024909
PANTHER:PTHR10890 PRINTS:PR00983 GO:GO:0004817 GO:GO:0006423
HSSP:P21888 HOVERGEN:HBG002089 TIGRFAMs:TIGR00435 EMBL:AB169694
ProteinModelPortal:Q4R550 PRIDE:Q4R550 Uniprot:Q4R550
Length = 748
Score = 408 (148.7 bits), Expect = 1.5e-54, Sum P(3) = 1.5e-54
Identities = 83/189 (43%), Positives = 118/189 (62%)
Query: 251 QQSLKLVVIMKEFFLNVKDHIRNLKFPATTVSSFEKWTQADLELSTRFIQTKNNVHAALC 310
+ +L+ + EFFLNVKD +R P FEKW + + EL+ F K +H ALC
Sbjct: 450 ESALQYEKFLNEFFLNVKDILRA---PVDITGQFEKWGEEEAELNKNFYDKKTAIHEALC 506
Query: 311 DNMDTRSALDSIRDCISQVNIYL------RGTPNQLLLRDIGAYVTKILTVFGCIGDVKN 364
DN+DTR+ ++ +R +SQ N+Y+ R PN+ LL +I Y+T +L +FG I + +
Sbjct: 507 DNVDTRTVMEEMRALVSQCNLYMAARKAMRKRPNRALLENIALYLTHMLKIFGAIEEESS 566
Query: 365 IGFPLGGTGVESTNLEELVLPYLTILSEFRDNIRTEARLIKSTEILNQCDRLRDEVLPNV 424
+GFP+GG+G S NLE V+PYL +LSEFR+ +R AR K E+L D LRD++LP +
Sbjct: 567 LGFPVGGSGT-SLNLESTVMPYLQVLSEFREGVRKIAREQKVPEVLQLSDALRDDILPEL 625
Query: 425 GVRLEDIEG 433
GVR ED EG
Sbjct: 626 GVRFEDPEG 634
Score = 406 (148.0 bits), Expect = 7.1e-65, Sum P(3) = 7.1e-65
Identities = 83/191 (43%), Positives = 121/191 (63%)
Query: 434 KSYITFDILRRILSEYFNYNITYAMNITDIDDKIIKRARQNYLFEKHVQENEIQTSKILK 493
+SYI+FDILRR+L +YF +++ Y MNITDIDDKIIKRARQN+LFE+++++ + +++L+
Sbjct: 69 RSYISFDILRRVLKDYFKFDVFYCMNITDIDDKIIKRARQNHLFEQYLEKRP-EAAQLLE 127
Query: 494 DIGEVMGAFESKMKLVTDPDKLTMMKNILSNVQEAKQDISAQPEGTINNIK-NVTFQKLL 552
D+ + F K+ TDPDK M++ I VQ A + + + + + N + LL
Sbjct: 128 DVQAALKPFSVKLNETTDPDKKQMLERIQHEVQLATEPLEKAVQSRLTGEEVNSCVEVLL 187
Query: 553 TAVRDPFSDWLDSLHGSSITDNSIFATLPKHWEAEFHKDMADLNKLLTAVRDPLSDWLDS 612
+D SDWLDS GS +TDNSIF+ LPK WE EFH+DM LN L V +S+++
Sbjct: 188 EEAKDLLSDWLDSTLGSDVTDNSIFSKLPKFWEGEFHRDMEALNVLPPDVLTRVSEYVPE 247
Query: 613 LHG--SSITDN 621
+ I DN
Sbjct: 248 IVNFVQKIVDN 258
Score = 328 (120.5 bits), Expect = 7.1e-65, Sum P(3) = 7.1e-65
Identities = 59/87 (67%), Positives = 66/87 (75%)
Query: 778 GDLS--SQEASEKRSPNDFALWKKSKAGEPWWSSPWGEGRPGWHIECSVMASAVLGPQLD 835
GDLS + SEKRSPNDFALWK SK GEP W PWG+GRPGWHIECS MA +LG +D
Sbjct: 302 GDLSISADRLSEKRSPNDFALWKASKPGEPSWPCPWGKGRPGWHIECSAMAGTLLGASMD 361
Query: 836 IHTGGVDLKFPHHDNELAQAEGLPTHD 862
IH GG DL+FPHHDNELAQ+E +D
Sbjct: 362 IHGGGFDLRFPHHDNELAQSEAYFEND 388
Score = 242 (90.2 bits), Expect = 1.2e-46, Sum P(3) = 1.2e-46
Identities = 46/64 (71%), Positives = 51/64 (79%)
Query: 598 LLTAVRDPLSDWLDSLHGSSITDNSIFATLPKHWEAEFHKDMADLNVLPPTVLTRVSEYI 657
LL +D LSDWLDS GS +TDNSIF+ LPK WE EFH+DM LNVLPP VLTRVSEY+
Sbjct: 186 LLEEAKDLLSDWLDSTLGSDVTDNSIFSKLPKFWEGEFHRDMEALNVLPPDVLTRVSEYV 245
Query: 658 PEIV 661
PEIV
Sbjct: 246 PEIV 249
Score = 227 (85.0 bits), Expect = 1.5e-54, Sum P(3) = 1.5e-54
Identities = 45/71 (63%), Positives = 53/71 (74%)
Query: 118 VLPPTVLTRVSEYIPEIVASYIEKIIANGLAYESNGSVYFNVNAFDSQPNHYYAKLVPEA 177
VLPP VLTRVSEY+PEIV ++++KI+ NG Y S+GSVYF+ F S H Y KLVPEA
Sbjct: 232 VLPPDVLTRVSEYVPEIV-NFVQKIVDNGYGYVSDGSVYFDTAKFASSEKHSYGKLVPEA 290
Query: 178 YGDTKTLQEGE 188
GD K LQEGE
Sbjct: 291 VGDQKALQEGE 301
Score = 44 (20.5 bits), Expect = 7.1e-65, Sum P(3) = 7.1e-65
Identities = 11/42 (26%), Positives = 13/42 (30%)
Query: 857 GLPTHDQEXXXXXXXXXXXXXXXXXXXXXXYNEYIASVQKAT 898
GLPTHD E Y EY+ Q +
Sbjct: 705 GLPTHDAEGKELSKGQAKKVKKLFEAQEKLYKEYLQMPQNGS 746
Score = 43 (20.2 bits), Expect = 9.0e-65, Sum P(3) = 9.0e-65
Identities = 11/39 (28%), Positives = 12/39 (30%)
Query: 910 GLPTHDQEXXXXXXXXXXXXXXXXXXXXXXYNEYIASVQ 948
GLPTHD E Y EY+ Q
Sbjct: 705 GLPTHDAEGKELSKGQAKKVKKLFEAQEKLYKEYLQMPQ 743
Score = 39 (18.8 bits), Expect = 3.1e-14, Sum P(3) = 3.1e-14
Identities = 13/44 (29%), Positives = 21/44 (47%)
Query: 376 STNLEELVLPYLTILSEFRDNIRTEARLIKSTEILNQCDRLRDE 419
S+N E L Y L+EF N++ R +I Q ++ +E
Sbjct: 445 SSNTMESALQYEKFLNEFFLNVKDILRA--PVDITGQFEKWGEE 486
Score = 37 (18.1 bits), Expect = 4.9e-14, Sum P(3) = 4.9e-14
Identities = 10/42 (23%), Positives = 20/42 (47%)
Query: 376 STNLEELVLPYLTILSEFRDNIRTEARLIKSTEILNQCDRLR 417
S L + +LP L + E + + T +L+ +L + + R
Sbjct: 614 SDALRDDILPELGVRFEDPEGLPTVVKLVDRNTLLKEREEKR 655
>UNIPROTKB|F1PU34 [details] [associations]
symbol:CARS "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0006423 "cysteinyl-tRNA aminoacylation"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] [GO:0004817 "cysteine-tRNA ligase
activity" evidence=IEA] HAMAP:MF_00041 InterPro:IPR009080
InterPro:IPR015803 Pfam:PF01406 GO:GO:0005524 GO:GO:0005737
Gene3D:3.40.50.620 InterPro:IPR014729 SUPFAM:SSF47323
InterPro:IPR024909 PANTHER:PTHR10890 PRINTS:PR00983 GO:GO:0004817
GO:GO:0006423 CTD:833 KO:K01883 TIGRFAMs:TIGR00435 OMA:VARWFRH
GeneTree:ENSGT00390000006347 EMBL:AAEX03011565 RefSeq:XP_851224.1
Ensembl:ENSCAFT00000016316 GeneID:475998 KEGG:cfa:475998
Uniprot:F1PU34
Length = 831
Score = 412 (150.1 bits), Expect = 7.9e-65, Sum P(3) = 7.9e-65
Identities = 85/191 (44%), Positives = 122/191 (63%)
Query: 434 KSYITFDILRRILSEYFNYNITYAMNITDIDDKIIKRARQNYLFEKHVQENEIQTSKILK 493
+SYI+FDILRR+L +YF Y++ Y MNITD+DDKIIKRARQNYLFE++ +E + + +++L+
Sbjct: 152 RSYISFDILRRVLRDYFGYDVFYCMNITDVDDKIIKRARQNYLFEEY-REKQPRAAQLLE 210
Query: 494 DIGEVMGAFESKMKLVTDPDKLTMMKNILSNVQEAKQDISAQPEGTIN-NIKNVTFQKLL 552
D+ + F K++ TDPDK M++ I VQ A + + + + + + + LL
Sbjct: 211 DVHAALKLFSVKLQETTDPDKKHMLERIQHTVQLAAEPLERAVQNDLPAEVADSCAEVLL 270
Query: 553 TAVRDPFSDWLDSLHGSSITDNSIFATLPKHWEAEFHKDMADLNKLLTAVRDPLSDWLDS 612
+D SDWLDS GS +TDNSIF+ LPK WE EFHKDM LN L V +S+++
Sbjct: 271 EEAKDLLSDWLDSTLGSEVTDNSIFSKLPKFWEEEFHKDMEALNVLPPDVLTRVSEYVPE 330
Query: 613 LHG--SSITDN 621
+ I DN
Sbjct: 331 IVNFVQKIVDN 341
Score = 397 (144.8 bits), Expect = 5.4e-53, Sum P(3) = 5.4e-53
Identities = 85/189 (44%), Positives = 116/189 (61%)
Query: 251 QQSLKLVVIMKEFFLNVKDHIRNLKFPATTVSSFEKWTQADLELSTRFIQTKNNVHAALC 310
+ +L+ M EFFLNVKD +R P FEKW + EL+ F K VH ALC
Sbjct: 533 ESALQYEKFMNEFFLNVKDLLRA---PVDISGRFEKWEDEESELNKSFYDKKAAVHEALC 589
Query: 311 DNMDTRSALDSIRDCISQVNIYL------RGTPNQLLLRDIGAYVTKILTVFGCIGDVKN 364
DN+DTR+ L+ +R +SQ N+Y+ R PN+ LL I Y+T++L +FG I + +
Sbjct: 590 DNVDTRTVLEEMRALVSQCNLYMATRKAARRRPNRALLESIALYLTRMLKIFGAIEEESS 649
Query: 365 IGFPLGGTGVESTNLEELVLPYLTILSEFRDNIRTEARLIKSTEILNQCDRLRDEVLPNV 424
+GFP+ G G S +LE V+PYL +LSEFR+ +R AR K E+L D LRD++LP +
Sbjct: 650 LGFPVRGPGT-SPDLESTVMPYLQVLSEFREGVRKIAREQKVPEVLQLSDALRDDILPEL 708
Query: 425 GVRLEDIEG 433
GVRLED EG
Sbjct: 709 GVRLEDHEG 717
Score = 328 (120.5 bits), Expect = 7.9e-65, Sum P(3) = 7.9e-65
Identities = 59/87 (67%), Positives = 66/87 (75%)
Query: 778 GDLS--SQEASEKRSPNDFALWKKSKAGEPWWSSPWGEGRPGWHIECSVMASAVLGPQLD 835
GDLS + SEKRSPNDFALWK SK GEP W PWG+GRPGWHIECS MA +LG +D
Sbjct: 385 GDLSISADRLSEKRSPNDFALWKASKPGEPSWPCPWGKGRPGWHIECSAMAGTLLGASMD 444
Query: 836 IHTGGVDLKFPHHDNELAQAEGLPTHD 862
IH GG DL+FPHHDNELAQ+E +D
Sbjct: 445 IHGGGFDLRFPHHDNELAQSEAYFEND 471
Score = 246 (91.7 bits), Expect = 2.0e-46, Sum P(3) = 2.0e-46
Identities = 66/158 (41%), Positives = 84/158 (53%)
Query: 509 VTD-PDKLTMM--KNILSNVQEAKQDISAQPEGTINNIKNVTFQKLLTAVRDPFSD-WLD 564
+TD DK+ +N L KQ +AQ ++ + F L DP L+
Sbjct: 178 ITDVDDKIIKRARQNYLFEEYREKQPRAAQLLEDVHAALKL-FSVKLQETTDPDKKHMLE 236
Query: 565 SL-HGSSITDNSIFATLPKHWEAEFHKDMADLNKLLTAVRDPLSDWLDSLHGSSITDNSI 623
+ H + + + AE A++ LL +D LSDWLDS GS +TDNSI
Sbjct: 237 RIQHTVQLAAEPLERAVQNDLPAEVADSCAEV--LLEEAKDLLSDWLDSTLGSEVTDNSI 294
Query: 624 FATLPKHWEAEFHKDMADLNVLPPTVLTRVSEYIPEIV 661
F+ LPK WE EFHKDM LNVLPP VLTRVSEY+PEIV
Sbjct: 295 FSKLPKFWEEEFHKDMEALNVLPPDVLTRVSEYVPEIV 332
Score = 232 (86.7 bits), Expect = 5.4e-53, Sum P(3) = 5.4e-53
Identities = 46/71 (64%), Positives = 53/71 (74%)
Query: 118 VLPPTVLTRVSEYIPEIVASYIEKIIANGLAYESNGSVYFNVNAFDSQPNHYYAKLVPEA 177
VLPP VLTRVSEY+PEIV ++++KI+ NG Y SNGSVYF+ F S H Y KLVPEA
Sbjct: 315 VLPPDVLTRVSEYVPEIV-NFVQKIVDNGYGYASNGSVYFDTVKFASSERHSYGKLVPEA 373
Query: 178 YGDTKTLQEGE 188
GD K LQEGE
Sbjct: 374 VGDQKALQEGE 384
Score = 41 (19.5 bits), Expect = 7.9e-65, Sum P(3) = 7.9e-65
Identities = 10/43 (23%), Positives = 14/43 (32%)
Query: 857 GLPTHDQEXXXXXXXXXXXXXXXXXXXXXXYNEYIASVQKATL 899
GLPTHD + + EY+ Q +L
Sbjct: 788 GLPTHDVDGKELSKGQAKKVKKLYEAQEKRHKEYLQMAQNGSL 830
Score = 38 (18.4 bits), Expect = 3.7e-14, Sum P(3) = 3.7e-14
Identities = 12/44 (27%), Positives = 21/44 (47%)
Query: 376 STNLEELVLPYLTILSEFRDNIRTEARLIKSTEILNQCDRLRDE 419
S+N E L Y ++EF N++ R +I + ++ DE
Sbjct: 528 SSNTMESALQYEKFMNEFFLNVKDLLRA--PVDISGRFEKWEDE 569
>UNIPROTKB|Q291L4 [details] [associations]
symbol:Aats-cys "Cysteine--tRNA ligase, cytoplasmic"
species:46245 "Drosophila pseudoobscura pseudoobscura" [GO:0000049
"tRNA binding" evidence=ISS] [GO:0004817 "cysteine-tRNA ligase
activity" evidence=ISS] [GO:0005737 "cytoplasm" evidence=ISS]
[GO:0006423 "cysteinyl-tRNA aminoacylation" evidence=ISS]
InterPro:IPR009080 InterPro:IPR015803 PROSITE:PS00178 Pfam:PF01406
GO:GO:0005524 GO:GO:0005737 GO:GO:0046872 GO:GO:0000049
EMBL:CM000071 GenomeReviews:CM000071_GR Gene3D:3.40.50.620
InterPro:IPR014729 SUPFAM:SSF47323 eggNOG:COG0215
InterPro:IPR024909 PANTHER:PTHR10890 PRINTS:PR00983 GO:GO:0004817
GO:GO:0006423 KO:K01883 TIGRFAMs:TIGR00435 OMA:VARWFRH
OrthoDB:EOG4CFXQ9 RefSeq:XP_001360523.1 ProteinModelPortal:Q291L4
GeneID:4803874 KEGG:dpo:Dpse_GA21073 FlyBase:FBgn0081061
InParanoid:Q291L4 Uniprot:Q291L4
Length = 741
Score = 404 (147.3 bits), Expect = 1.9e-59, Sum P(3) = 1.9e-59
Identities = 85/184 (46%), Positives = 120/184 (65%)
Query: 260 MKEFFLNVKDHIRNLKFPATTVSSFEKWTQADLELSTRFIQTKNNVHAALCDNMDTRSAL 319
+ EFFLNVKD R++ F+ WT + L +F ++ VHAALCDN+DTRSAL
Sbjct: 451 LNEFFLNVKDLTRHV-LSEEPRRQFDAWTDVEAALQKKFSSSQVQVHAALCDNVDTRSAL 509
Query: 320 DSIRDCISQVNIYLRGTP---NQLLLRDIGAYVTKILTVFGCI-GDVKNIGFPL-GGTGV 374
D+IR+ +S N+Y+R N LLLR++ Y+T +L VFG I G IGFP+ GG G
Sbjct: 510 DAIRELVSASNVYIRDNKSRLNSLLLRNVATYITDLLHVFGAIAGPRGGIGFPVSGGAGP 569
Query: 375 EST--NLEELVLPYLTILSEFRDNIRTEARLIKSTEILNQCDRLRDEVLPNVGVRLEDIE 432
++ +LE VLPY+ L+EFR+ +R +A+ +K+ +IL CD LRD +LPN+GVRLED +
Sbjct: 570 QAAGGDLETTVLPYVQTLAEFRNLVREQAKALKAFDILKLCDDLRDNILPNLGVRLEDKD 629
Query: 433 GKSY 436
G +
Sbjct: 630 GGKF 633
Score = 372 (136.0 bits), Expect = 3.6e-64, Sum P(3) = 3.6e-64
Identities = 81/194 (41%), Positives = 115/194 (59%)
Query: 434 KSYITFDILRRILSEYFNYNITYAMNITDIDDKIIKRARQNYLFEKHVQEN-EIQTSKIL 492
+SYI+FDILRRIL++YF YNI Y MNITDIDDKIIKRARQN+LFE++ E+ + ++L
Sbjct: 60 RSYISFDILRRILADYFGYNIHYVMNITDIDDKIIKRARQNHLFEEYAGESANLPLDQLL 119
Query: 493 KDIGEVMGAFESKMKLVTDPDKLTMMKNILSNVQEAKQDIS-AQPEGTINNIKNVTFQKL 551
EV+ F+ TDPDK M+ L + +A ++ A +G I Q
Sbjct: 120 GHQKEVLVRFQETCAKNTDPDKKVMLDKTLQRMNDAVVALTTAVSQGDEKGIAEKR-QHY 178
Query: 552 LTAVRDPFSDWLDSLHGSSITDNSIFATLPKHWEAEFHKDMADLNKLLTAVRDPLSDWLD 611
L +DP ++WLD G+ I DN++F +LP+ WE +FH DM LN L V +S+++
Sbjct: 179 LNEAKDPIAEWLDGKKGAEINDNAVFESLPRFWEDQFHNDMKSLNILPPDVLTRVSEYVP 238
Query: 612 SLHG--SSITDNSI 623
+ I DN +
Sbjct: 239 QIVAFIQKIIDNGL 252
Score = 356 (130.4 bits), Expect = 3.6e-64, Sum P(3) = 3.6e-64
Identities = 64/81 (79%), Positives = 66/81 (81%)
Query: 778 GDLSSQE--ASEKRSPNDFALWKKSKAGEPWWSSPWGEGRPGWHIECSVMASAVLGPQLD 835
GDLS E SEKRS NDFALWK SKAGEPWW SPWG GRPGWHIECS MAS + G D
Sbjct: 294 GDLSVAEDRLSEKRSANDFALWKASKAGEPWWDSPWGRGRPGWHIECSAMASDIFGSTFD 353
Query: 836 IHTGGVDLKFPHHDNELAQAE 856
IHTGGVDLKFPHHDNELAQ+E
Sbjct: 354 IHTGGVDLKFPHHDNELAQSE 374
Score = 274 (101.5 bits), Expect = 1.9e-59, Sum P(3) = 1.9e-59
Identities = 52/71 (73%), Positives = 62/71 (87%)
Query: 118 VLPPTVLTRVSEYIPEIVASYIEKIIANGLAYESNGSVYFNVNAFDSQPNHYYAKLVPEA 177
+LPP VLTRVSEY+P+IVA +I+KII NGLAY +N SVYF+VN FD + H+YAKLVPEA
Sbjct: 224 ILPPDVLTRVSEYVPQIVA-FIQKIIDNGLAYAANNSVYFDVNGFDRKEKHHYAKLVPEA 282
Query: 178 YGDTKTLQEGE 188
YGDTK+LQEGE
Sbjct: 283 YGDTKSLQEGE 293
Score = 214 (80.4 bits), Expect = 2.0e-47, Sum P(3) = 2.0e-47
Identities = 35/63 (55%), Positives = 48/63 (76%)
Query: 599 LTAVRDPLSDWLDSLHGSSITDNSIFATLPKHWEAEFHKDMADLNVLPPTVLTRVSEYIP 658
L +DP+++WLD G+ I DN++F +LP+ WE +FH DM LN+LPP VLTRVSEY+P
Sbjct: 179 LNEAKDPIAEWLDGKKGAEINDNAVFESLPRFWEDQFHNDMKSLNILPPDVLTRVSEYVP 238
Query: 659 EIV 661
+IV
Sbjct: 239 QIV 241
Score = 48 (22.0 bits), Expect = 3.6e-64, Sum P(3) = 3.6e-64
Identities = 12/41 (29%), Positives = 17/41 (41%)
Query: 857 GLPTHDQEXXXXXXXXXXXXXXXXXXXXXXYNEYIASVQKA 897
GLPT D+E Y EY+AS+++A
Sbjct: 701 GLPTLDKEGKEISKGQVKKLQKLQQQQEQRYKEYLASIKEA 741
Score = 47 (21.6 bits), Expect = 1.1e-20, Sum P(3) = 1.1e-20
Identities = 14/43 (32%), Positives = 19/43 (44%)
Query: 376 STNLEELVLPYLTILSEFRDNIRTEARLIKSTEILNQCDRLRD 418
S N E+ Y L+EF N++ R + S E Q D D
Sbjct: 437 SENTMEMATQYEKFLNEFFLNVKDLTRHVLSEEPRRQFDAWTD 479
Score = 43 (20.2 bits), Expect = 1.2e-63, Sum P(3) = 1.2e-63
Identities = 11/39 (28%), Positives = 15/39 (38%)
Query: 910 GLPTHDQEXXXXXXXXXXXXXXXXXXXXXXYNEYIASVQ 948
GLPT D+E Y EY+AS++
Sbjct: 701 GLPTLDKEGKEISKGQVKKLQKLQQQQEQRYKEYLASIK 739
Score = 38 (18.4 bits), Expect = 9.0e-20, Sum P(3) = 9.0e-20
Identities = 12/42 (28%), Positives = 19/42 (45%)
Query: 527 EAKQDISAQPEGTIN----NIKNVTFQKLLTAVRDPFSDWLD 564
E +++ Q E +N N+K++T L R F W D
Sbjct: 438 ENTMEMATQYEKFLNEFFLNVKDLTRHVLSEEPRRQFDAWTD 479
>UNIPROTKB|A8MVQ3 [details] [associations]
symbol:CARS "Cysteinyl-tRNA synthetase, isoform CRA_b"
species:9606 "Homo sapiens" [GO:0004817 "cysteine-tRNA ligase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0006423 "cysteinyl-tRNA aminoacylation" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IDA] HAMAP:MF_00041
InterPro:IPR009080 InterPro:IPR015803 Pfam:PF01406 GO:GO:0005524
GO:GO:0005737 Gene3D:3.40.50.620 InterPro:IPR014729 EMBL:CH471158
SUPFAM:SSF47323 InterPro:IPR024909 PANTHER:PTHR10890 PRINTS:PR00983
GO:GO:0004817 GO:GO:0006423 EMBL:AC108448 HOGENOM:HOG000245252
HOVERGEN:HBG002089 TIGRFAMs:TIGR00435 EMBL:AC131971
UniGene:Hs.274873 HGNC:HGNC:1493 PharmGKB:PA26079 ChiTaRS:CARS
NextBio:3450 EMBL:AK096313 IPI:IPI00556541 SMR:A8MVQ3 STRING:A8MVQ3
Ensembl:ENST00000397114 UCSC:uc001lxe.3 Uniprot:A8MVQ3
Length = 738
Score = 401 (146.2 bits), Expect = 1.3e-54, Sum P(3) = 1.3e-54
Identities = 83/189 (43%), Positives = 116/189 (61%)
Query: 251 QQSLKLVVIMKEFFLNVKDHIRNLKFPATTVSSFEKWTQADLELSTRFIQTKNNVHAALC 310
+ +L+ + EFFLNVKD +R P FEKW + + EL+ F K +H ALC
Sbjct: 440 ESALQYEKFLNEFFLNVKDILRA---PVDITGQFEKWGEEEAELNKNFYDKKTAIHKALC 496
Query: 311 DNMDTRSALDSIRDCISQVNIYL------RGTPNQLLLRDIGAYVTKILTVFGCIGDVKN 364
DN+DTR+ ++ +R +SQ N+Y+ R PNQ LL +I Y+T +L +FG + + +
Sbjct: 497 DNVDTRTVMEEMRALVSQCNLYMAARKAVRKRPNQALLENIALYLTHMLKIFGAVEEDSS 556
Query: 365 IGFPLGGTGVESTNLEELVLPYLTILSEFRDNIRTEARLIKSTEILNQCDRLRDEVLPNV 424
+GFP+GG G S +LE V+PYL +LSEFR+ +R AR K EIL D LRD +LP +
Sbjct: 557 LGFPVGGPGT-SLSLEATVMPYLQVLSEFREGVRKIAREQKVPEILQLSDALRDNILPEL 615
Query: 425 GVRLEDIEG 433
GVR ED EG
Sbjct: 616 GVRFEDHEG 624
Score = 396 (144.5 bits), Expect = 5.0e-64, Sum P(3) = 5.0e-64
Identities = 82/191 (42%), Positives = 119/191 (62%)
Query: 434 KSYITFDILRRILSEYFNYNITYAMNITDIDDKIIKRARQNYLFEKHVQENEIQTSKILK 493
+SYI+FDILRR+L +YF +++ Y MNITDIDDKIIKRARQN+LFE++ +E + +++L+
Sbjct: 59 RSYISFDILRRVLKDYFKFDVFYCMNITDIDDKIIKRARQNHLFEQY-REKRPEAAQLLE 117
Query: 494 DIGEVMGAFESKMKLVTDPDKLTMMKNILSNVQEAKQDISAQPEGTINNIK-NVTFQKLL 552
D+ + F K+ TDPDK M++ I VQ A + + + + + N + LL
Sbjct: 118 DVQAALKPFSVKLNETTDPDKKQMLERIQHAVQLATEPLEKAVQSRLTGEEVNSCVEVLL 177
Query: 553 TAVRDPFSDWLDSLHGSSITDNSIFATLPKHWEAEFHKDMADLNKLLTAVRDPLSDWLDS 612
+D SDWLDS G +TDNSIF+ LPK WE +FH+DM LN L V +S+++
Sbjct: 178 EEAKDLLSDWLDSTLGCDVTDNSIFSKLPKFWEGDFHRDMEALNVLPPDVLTRVSEYVPE 237
Query: 613 LHG--SSITDN 621
+ I DN
Sbjct: 238 IVNFVQKIVDN 248
Score = 328 (120.5 bits), Expect = 5.0e-64, Sum P(3) = 5.0e-64
Identities = 59/87 (67%), Positives = 66/87 (75%)
Query: 778 GDLS--SQEASEKRSPNDFALWKKSKAGEPWWSSPWGEGRPGWHIECSVMASAVLGPQLD 835
GDLS + SEKRSPNDFALWK SK GEP W PWG+GRPGWHIECS MA +LG +D
Sbjct: 292 GDLSISADRLSEKRSPNDFALWKASKPGEPSWPCPWGKGRPGWHIECSAMAGTLLGASMD 351
Query: 836 IHTGGVDLKFPHHDNELAQAEGLPTHD 862
IH GG DL+FPHHDNELAQ+E +D
Sbjct: 352 IHGGGFDLRFPHHDNELAQSEAYFEND 378
Score = 234 (87.4 bits), Expect = 3.7e-46, Sum P(3) = 3.7e-46
Identities = 44/64 (68%), Positives = 50/64 (78%)
Query: 598 LLTAVRDPLSDWLDSLHGSSITDNSIFATLPKHWEAEFHKDMADLNVLPPTVLTRVSEYI 657
LL +D LSDWLDS G +TDNSIF+ LPK WE +FH+DM LNVLPP VLTRVSEY+
Sbjct: 176 LLEEAKDLLSDWLDSTLGCDVTDNSIFSKLPKFWEGDFHRDMEALNVLPPDVLTRVSEYV 235
Query: 658 PEIV 661
PEIV
Sbjct: 236 PEIV 239
Score = 232 (86.7 bits), Expect = 1.3e-54, Sum P(3) = 1.3e-54
Identities = 46/71 (64%), Positives = 53/71 (74%)
Query: 118 VLPPTVLTRVSEYIPEIVASYIEKIIANGLAYESNGSVYFNVNAFDSQPNHYYAKLVPEA 177
VLPP VLTRVSEY+PEIV ++++KI+ NG Y SNGSVYF+ F S H Y KLVPEA
Sbjct: 222 VLPPDVLTRVSEYVPEIV-NFVQKIVDNGYGYVSNGSVYFDTAKFASSEKHSYGKLVPEA 280
Query: 178 YGDTKTLQEGE 188
GD K LQEGE
Sbjct: 281 VGDQKALQEGE 291
Score = 47 (21.6 bits), Expect = 5.0e-64, Sum P(3) = 5.0e-64
Identities = 11/42 (26%), Positives = 13/42 (30%)
Query: 857 GLPTHDQEXXXXXXXXXXXXXXXXXXXXXXYNEYIASVQKAT 898
GLPTHD E Y EY+ Q +
Sbjct: 695 GLPTHDMEGKELSKGQAKKLKKLFEAQEKLYKEYLQMAQNGS 736
Score = 46 (21.3 bits), Expect = 6.3e-64, Sum P(3) = 6.3e-64
Identities = 11/39 (28%), Positives = 12/39 (30%)
Query: 910 GLPTHDQEXXXXXXXXXXXXXXXXXXXXXXYNEYIASVQ 948
GLPTHD E Y EY+ Q
Sbjct: 695 GLPTHDMEGKELSKGQAKKLKKLFEAQEKLYKEYLQMAQ 733
Score = 40 (19.1 bits), Expect = 3.2e-15, Sum P(3) = 3.2e-15
Identities = 10/42 (23%), Positives = 20/42 (47%)
Query: 376 STNLEELVLPYLTILSEFRDNIRTEARLIKSTEILNQCDRLR 417
S L + +LP L + E + + T +L+ +L + + R
Sbjct: 604 SDALRDNILPELGVRFEDHEGLPTVVKLVDRNTLLKEREEKR 645
Score = 39 (18.8 bits), Expect = 4.0e-15, Sum P(3) = 4.0e-15
Identities = 13/44 (29%), Positives = 21/44 (47%)
Query: 376 STNLEELVLPYLTILSEFRDNIRTEARLIKSTEILNQCDRLRDE 419
S+N E L Y L+EF N++ R +I Q ++ +E
Sbjct: 435 SSNTMESALQYEKFLNEFFLNVKDILRA--PVDITGQFEKWGEE 476
>ZFIN|ZDB-GENE-030328-29 [details] [associations]
symbol:cars "cysteinyl-tRNA synthetase" species:7955
"Danio rerio" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0006418 "tRNA
aminoacylation for protein translation" evidence=IEA] [GO:0004812
"aminoacyl-tRNA ligase activity" evidence=IEA] [GO:0006423
"cysteinyl-tRNA aminoacylation" evidence=IEA;IBA] [GO:0004817
"cysteine-tRNA ligase activity" evidence=IEA;IBA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0005829 "cytosol" evidence=IBA]
HAMAP:MF_00041 InterPro:IPR009080 InterPro:IPR015803 Pfam:PF01406
ZFIN:ZDB-GENE-030328-29 GO:GO:0005829 GO:GO:0005524
Gene3D:3.40.50.620 InterPro:IPR014729 SUPFAM:SSF47323
InterPro:IPR024909 PANTHER:PTHR10890 PRINTS:PR00983 GO:GO:0004817
GO:GO:0006423 TIGRFAMs:TIGR00435 GeneTree:ENSGT00390000006347
EMBL:AL935207 IPI:IPI00994725 ProteinModelPortal:F1QFM2
Ensembl:ENSDART00000126516 ArrayExpress:F1QFM2 Bgee:F1QFM2
Uniprot:F1QFM2
Length = 832
Score = 413 (150.4 bits), Expect = 1.0e-57, Sum P(3) = 1.0e-57
Identities = 84/180 (46%), Positives = 117/180 (65%)
Query: 260 MKEFFLNVKDHIRNLKFPATTVSSFEKWTQADLELSTRFIQTKNNVHAALCDNMDTRSAL 319
+ EFFLNVKD +R+ P +EKW ++EL+ F K +VH ALCDN+DTRSAL
Sbjct: 545 INEFFLNVKDILRS---PTDITGQYEKWEAEEIELNKCFYDKKTSVHGALCDNIDTRSAL 601
Query: 320 DSIRDCISQVNIYLRGT------PNQLLLRDIGAYVTKILTVFGCIGDVKNIGFPLGGTG 373
+ +R + Q N Y+ PN++LL+ I Y+T +L FG I IGFP+GG G
Sbjct: 602 EEMRALVGQSNTYMAARRSAKLPPNRMLLQSIALYLTDMLKTFGAIEGTDPIGFPVGGNG 661
Query: 374 VESTNLEELVLPYLTILSEFRDNIRTEARLIKSTEILNQCDRLRDEVLPNVGVRLEDIEG 433
+S +LE V+PYL++LS+FR+++R AR K TE+L CD+LRD+ LP +GVRLED +G
Sbjct: 662 -QSADLESTVMPYLSVLSDFREDVRKIAREKKVTELLQLCDQLRDDTLPELGVRLEDRDG 720
Score = 401 (146.2 bits), Expect = 5.0e-64, Sum P(3) = 5.0e-64
Identities = 87/192 (45%), Positives = 122/192 (63%)
Query: 434 KSYITFDILRRILSEYFNYNITYAMNITDIDDKIIKRARQNYLFEKHVQENEIQTSKILK 493
+SYI+FDILRRIL YF Y++ Y MNITDIDDKIIKRARQNYL E++ +E + ++IL+
Sbjct: 155 RSYISFDILRRILKNYFKYDVFYCMNITDIDDKIIKRARQNYLLEQY-REKKPSAAQILQ 213
Query: 494 DIGEVMGAFESKMKLVTDPDKLTMMKNILSNVQEA--KQDISAQPEGTINNIKNVTFQKL 551
D+ F++K+ TDPDK M++ + S V A ++ Q + ++I+ Q L
Sbjct: 214 DVLTARTPFKAKLAETTDPDKKQMLERLDSAVDAALGPLQVAVQSKAAQDSIQKQA-QVL 272
Query: 552 LTAVRDPFSDWLDSLHGSSITDNSIFATLPKHWEAEFHKDMADLNKLLTAVRDPLSDWLD 611
L +D SDWLDS GS +T+NSIF+ LPK+WE E+HKDM LN L V +S+++
Sbjct: 273 LEEAKDLLSDWLDSQFGSQVTENSIFSLLPKYWEGEYHKDMEALNVLPPDVLTRVSEYVP 332
Query: 612 SL--HGSSITDN 621
+ I DN
Sbjct: 333 EIVEFVKKIVDN 344
Score = 326 (119.8 bits), Expect = 5.0e-64, Sum P(3) = 5.0e-64
Identities = 59/87 (67%), Positives = 66/87 (75%)
Query: 778 GDLS--SQEASEKRSPNDFALWKKSKAGEPWWSSPWGEGRPGWHIECSVMASAVLGPQLD 835
GDLS + SEKRS NDFALWK SK GEP W SPWG GRPGWHIECS MA ++LG +D
Sbjct: 388 GDLSISADRLSEKRSQNDFALWKASKPGEPSWDSPWGMGRPGWHIECSAMAGSILGESMD 447
Query: 836 IHTGGVDLKFPHHDNELAQAEGLPTHD 862
IH GG DL+FPHHDNELAQ+E +D
Sbjct: 448 IHGGGFDLRFPHHDNELAQSEAYFEND 474
Score = 252 (93.8 bits), Expect = 1.0e-57, Sum P(3) = 1.0e-57
Identities = 50/71 (70%), Positives = 56/71 (78%)
Query: 118 VLPPTVLTRVSEYIPEIVASYIEKIIANGLAYESNGSVYFNVNAFDSQPNHYYAKLVPEA 177
VLPP VLTRVSEY+PEIV +++KI+ NG YESNGSVYF+ FDS P H YAKLVPEA
Sbjct: 318 VLPPDVLTRVSEYVPEIV-EFVKKIVDNGYGYESNGSVYFDTAKFDSCPAHSYAKLVPEA 376
Query: 178 YGDTKTLQEGE 188
GD K LQEGE
Sbjct: 377 VGDQKALQEGE 387
Score = 242 (90.2 bits), Expect = 1.7e-46, Sum P(3) = 1.7e-46
Identities = 45/64 (70%), Positives = 52/64 (81%)
Query: 598 LLTAVRDPLSDWLDSLHGSSITDNSIFATLPKHWEAEFHKDMADLNVLPPTVLTRVSEYI 657
LL +D LSDWLDS GS +T+NSIF+ LPK+WE E+HKDM LNVLPP VLTRVSEY+
Sbjct: 272 LLEEAKDLLSDWLDSQFGSQVTENSIFSLLPKYWEGEYHKDMEALNVLPPDVLTRVSEYV 331
Query: 658 PEIV 661
PEIV
Sbjct: 332 PEIV 335
Score = 48 (22.0 bits), Expect = 5.0e-64, Sum P(3) = 5.0e-64
Identities = 11/42 (26%), Positives = 14/42 (33%)
Query: 857 GLPTHDQEXXXXXXXXXXXXXXXXXXXXXXYNEYIASVQKAT 898
G PTHD E +NEY+ S Q +
Sbjct: 791 GFPTHDAEGKELSKGLTKKLRKLYETQEKLHNEYLQSTQNGS 832
Score = 47 (21.6 bits), Expect = 6.3e-64, Sum P(3) = 6.3e-64
Identities = 11/39 (28%), Positives = 13/39 (33%)
Query: 910 GLPTHDQEXXXXXXXXXXXXXXXXXXXXXXYNEYIASVQ 948
G PTHD E +NEY+ S Q
Sbjct: 791 GFPTHDAEGKELSKGLTKKLRKLYETQEKLHNEYLQSTQ 829
Score = 42 (19.8 bits), Expect = 1.8e-17, Sum P(3) = 1.8e-17
Identities = 12/44 (27%), Positives = 21/44 (47%)
Query: 379 LEELVLPYLTILSEFRDNIRTEARLIKSTEILNQCD---RLRDE 419
L + LP L + E RD + T +L+ + Q +L+D+
Sbjct: 703 LRDDTLPELGVRLEDRDGLPTSVKLVDKETLHTQVSSGFKLKDD 746
>UNIPROTKB|P49589 [details] [associations]
symbol:CARS "Cysteine--tRNA ligase, cytoplasmic"
species:9606 "Homo sapiens" [GO:0046872 "metal ion binding"
evidence=IEA] [GO:0004817 "cysteine-tRNA ligase activity"
evidence=IDA;TAS] [GO:0005524 "ATP binding" evidence=IDA]
[GO:0006423 "cysteinyl-tRNA aminoacylation" evidence=IDA]
[GO:0000049 "tRNA binding" evidence=NAS;IDA;IMP] [GO:0042803
"protein homodimerization activity" evidence=IDA;IMP] [GO:0005737
"cytoplasm" evidence=IDA;NAS] [GO:0005515 "protein binding"
evidence=IPI] [GO:0005829 "cytosol" evidence=TAS] [GO:0006418 "tRNA
aminoacylation for protein translation" evidence=TAS] [GO:0010467
"gene expression" evidence=TAS] Reactome:REACT_71
InterPro:IPR009080 InterPro:IPR015803 PROSITE:PS00178 Pfam:PF01406
GO:GO:0005829 GO:GO:0005524 GO:GO:0005737 GO:GO:0042803
GO:GO:0046872 DrugBank:DB00151 GO:GO:0000049 Gene3D:3.40.50.620
InterPro:IPR014729 EMBL:CH471158 SUPFAM:SSF47323 eggNOG:COG0215
InterPro:IPR024909 PANTHER:PTHR10890 PRINTS:PR00983 GO:GO:0004817
GO:GO:0006423 EMBL:AC108448 CTD:833 HOGENOM:HOG000245252
HOVERGEN:HBG002089 KO:K01883 TIGRFAMs:TIGR00435 OMA:VARWFRH
EMBL:L06845 EMBL:AF288206 EMBL:AF288207 EMBL:BT009913 EMBL:AK302644
EMBL:BX647906 EMBL:AC131971 EMBL:BC002880 IPI:IPI00027443
IPI:IPI00556365 IPI:IPI00939491 RefSeq:NP_001014437.1
RefSeq:NP_001742.1 RefSeq:NP_644802.1 UniGene:Hs.274873
ProteinModelPortal:P49589 SMR:P49589 IntAct:P49589 STRING:P49589
PhosphoSite:P49589 DMDM:20141641 PaxDb:P49589 PRIDE:P49589
DNASU:833 Ensembl:ENST00000278224 Ensembl:ENST00000380525
Ensembl:ENST00000397111 GeneID:833 KEGG:hsa:833 UCSC:uc001lxg.3
UCSC:uc001lxh.3 GeneCards:GC11M003022 H-InvDB:HIX0128660
HGNC:HGNC:1493 HPA:HPA002383 HPA:HPA002384 MIM:123859
neXtProt:NX_P49589 PharmGKB:PA26079 OrthoDB:EOG473PQS
PhylomeDB:P49589 ChiTaRS:CARS GenomeRNAi:833 NextBio:3450
ArrayExpress:P49589 Bgee:P49589 CleanEx:HS_CARS
Genevestigator:P49589 GermOnline:ENSG00000110619 Uniprot:P49589
Length = 748
Score = 401 (146.2 bits), Expect = 1.6e-54, Sum P(3) = 1.6e-54
Identities = 83/189 (43%), Positives = 116/189 (61%)
Query: 251 QQSLKLVVIMKEFFLNVKDHIRNLKFPATTVSSFEKWTQADLELSTRFIQTKNNVHAALC 310
+ +L+ + EFFLNVKD +R P FEKW + + EL+ F K +H ALC
Sbjct: 450 ESALQYEKFLNEFFLNVKDILRA---PVDITGQFEKWGEEEAELNKNFYDKKTAIHKALC 506
Query: 311 DNMDTRSALDSIRDCISQVNIYL------RGTPNQLLLRDIGAYVTKILTVFGCIGDVKN 364
DN+DTR+ ++ +R +SQ N+Y+ R PNQ LL +I Y+T +L +FG + + +
Sbjct: 507 DNVDTRTVMEEMRALVSQCNLYMAARKAVRKRPNQALLENIALYLTHMLKIFGAVEEDSS 566
Query: 365 IGFPLGGTGVESTNLEELVLPYLTILSEFRDNIRTEARLIKSTEILNQCDRLRDEVLPNV 424
+GFP+GG G S +LE V+PYL +LSEFR+ +R AR K EIL D LRD +LP +
Sbjct: 567 LGFPVGGPGT-SLSLEATVMPYLQVLSEFREGVRKIAREQKVPEILQLSDALRDNILPEL 625
Query: 425 GVRLEDIEG 433
GVR ED EG
Sbjct: 626 GVRFEDHEG 634
Score = 396 (144.5 bits), Expect = 5.7e-64, Sum P(3) = 5.7e-64
Identities = 82/191 (42%), Positives = 119/191 (62%)
Query: 434 KSYITFDILRRILSEYFNYNITYAMNITDIDDKIIKRARQNYLFEKHVQENEIQTSKILK 493
+SYI+FDILRR+L +YF +++ Y MNITDIDDKIIKRARQN+LFE++ +E + +++L+
Sbjct: 69 RSYISFDILRRVLKDYFKFDVFYCMNITDIDDKIIKRARQNHLFEQY-REKRPEAAQLLE 127
Query: 494 DIGEVMGAFESKMKLVTDPDKLTMMKNILSNVQEAKQDISAQPEGTINNIK-NVTFQKLL 552
D+ + F K+ TDPDK M++ I VQ A + + + + + N + LL
Sbjct: 128 DVQAALKPFSVKLNETTDPDKKQMLERIQHAVQLATEPLEKAVQSRLTGEEVNSCVEVLL 187
Query: 553 TAVRDPFSDWLDSLHGSSITDNSIFATLPKHWEAEFHKDMADLNKLLTAVRDPLSDWLDS 612
+D SDWLDS G +TDNSIF+ LPK WE +FH+DM LN L V +S+++
Sbjct: 188 EEAKDLLSDWLDSTLGCDVTDNSIFSKLPKFWEGDFHRDMEALNVLPPDVLTRVSEYVPE 247
Query: 613 LHG--SSITDN 621
+ I DN
Sbjct: 248 IVNFVQKIVDN 258
Score = 328 (120.5 bits), Expect = 5.7e-64, Sum P(3) = 5.7e-64
Identities = 59/87 (67%), Positives = 66/87 (75%)
Query: 778 GDLS--SQEASEKRSPNDFALWKKSKAGEPWWSSPWGEGRPGWHIECSVMASAVLGPQLD 835
GDLS + SEKRSPNDFALWK SK GEP W PWG+GRPGWHIECS MA +LG +D
Sbjct: 302 GDLSISADRLSEKRSPNDFALWKASKPGEPSWPCPWGKGRPGWHIECSAMAGTLLGASMD 361
Query: 836 IHTGGVDLKFPHHDNELAQAEGLPTHD 862
IH GG DL+FPHHDNELAQ+E +D
Sbjct: 362 IHGGGFDLRFPHHDNELAQSEAYFEND 388
Score = 234 (87.4 bits), Expect = 4.1e-46, Sum P(3) = 4.1e-46
Identities = 44/64 (68%), Positives = 50/64 (78%)
Query: 598 LLTAVRDPLSDWLDSLHGSSITDNSIFATLPKHWEAEFHKDMADLNVLPPTVLTRVSEYI 657
LL +D LSDWLDS G +TDNSIF+ LPK WE +FH+DM LNVLPP VLTRVSEY+
Sbjct: 186 LLEEAKDLLSDWLDSTLGCDVTDNSIFSKLPKFWEGDFHRDMEALNVLPPDVLTRVSEYV 245
Query: 658 PEIV 661
PEIV
Sbjct: 246 PEIV 249
Score = 232 (86.7 bits), Expect = 1.6e-54, Sum P(3) = 1.6e-54
Identities = 46/71 (64%), Positives = 53/71 (74%)
Query: 118 VLPPTVLTRVSEYIPEIVASYIEKIIANGLAYESNGSVYFNVNAFDSQPNHYYAKLVPEA 177
VLPP VLTRVSEY+PEIV ++++KI+ NG Y SNGSVYF+ F S H Y KLVPEA
Sbjct: 232 VLPPDVLTRVSEYVPEIV-NFVQKIVDNGYGYVSNGSVYFDTAKFASSEKHSYGKLVPEA 290
Query: 178 YGDTKTLQEGE 188
GD K LQEGE
Sbjct: 291 VGDQKALQEGE 301
Score = 47 (21.6 bits), Expect = 5.7e-64, Sum P(3) = 5.7e-64
Identities = 11/42 (26%), Positives = 13/42 (30%)
Query: 857 GLPTHDQEXXXXXXXXXXXXXXXXXXXXXXYNEYIASVQKAT 898
GLPTHD E Y EY+ Q +
Sbjct: 705 GLPTHDMEGKELSKGQAKKLKKLFEAQEKLYKEYLQMAQNGS 746
Score = 46 (21.3 bits), Expect = 7.3e-64, Sum P(3) = 7.3e-64
Identities = 11/39 (28%), Positives = 12/39 (30%)
Query: 910 GLPTHDQEXXXXXXXXXXXXXXXXXXXXXXYNEYIASVQ 948
GLPTHD E Y EY+ Q
Sbjct: 705 GLPTHDMEGKELSKGQAKKLKKLFEAQEKLYKEYLQMAQ 743
Score = 40 (19.1 bits), Expect = 3.4e-15, Sum P(3) = 3.4e-15
Identities = 10/42 (23%), Positives = 20/42 (47%)
Query: 376 STNLEELVLPYLTILSEFRDNIRTEARLIKSTEILNQCDRLR 417
S L + +LP L + E + + T +L+ +L + + R
Sbjct: 614 SDALRDNILPELGVRFEDHEGLPTVVKLVDRNTLLKEREEKR 655
Score = 39 (18.8 bits), Expect = 4.3e-15, Sum P(3) = 4.3e-15
Identities = 13/44 (29%), Positives = 21/44 (47%)
Query: 376 STNLEELVLPYLTILSEFRDNIRTEARLIKSTEILNQCDRLRDE 419
S+N E L Y L+EF N++ R +I Q ++ +E
Sbjct: 445 SSNTMESALQYEKFLNEFFLNVKDILRA--PVDITGQFEKWGEE 486
>UNIPROTKB|Q5M7N8 [details] [associations]
symbol:cars "Cysteine--tRNA ligase, cytoplasmic"
species:8364 "Xenopus (Silurana) tropicalis" [GO:0000049 "tRNA
binding" evidence=ISS] [GO:0004817 "cysteine-tRNA ligase activity"
evidence=ISS] [GO:0005737 "cytoplasm" evidence=ISS] [GO:0006423
"cysteinyl-tRNA aminoacylation" evidence=ISS] InterPro:IPR009080
InterPro:IPR015803 PROSITE:PS00178 Pfam:PF01406 GO:GO:0005524
GO:GO:0005737 GO:GO:0046872 GO:GO:0000049 Gene3D:3.40.50.620
InterPro:IPR014729 SUPFAM:SSF47323 eggNOG:COG0215
InterPro:IPR024909 PANTHER:PTHR10890 PRINTS:PR00983 GO:GO:0004817
GO:GO:0006423 HSSP:P21888 CTD:833 HOGENOM:HOG000245252
HOVERGEN:HBG002089 KO:K01883 TIGRFAMs:TIGR00435 EMBL:BC088531
RefSeq:NP_001011365.1 UniGene:Str.11779 ProteinModelPortal:Q5M7N8
STRING:Q5M7N8 GeneID:496832 KEGG:xtr:496832 Xenbase:XB-GENE-5825933
Uniprot:Q5M7N8
Length = 747
Score = 406 (148.0 bits), Expect = 1.1e-55, Sum P(3) = 1.1e-55
Identities = 87/180 (48%), Positives = 115/180 (63%)
Query: 260 MKEFFLNVKDHIRNLKFPATTVSSFEKWTQADLELSTRFIQTKNNVHAALCDNMDTRSAL 319
M EFFLNVKD +R P F KW +LEL++ F K VH ALCDN+DTR+ +
Sbjct: 458 MNEFFLNVKDLLRA---PTDVTGQFVKWEVPELELNSCFYSKKAAVHEALCDNIDTRTVM 514
Query: 320 DSIRDCISQVNIYL------RGTPNQLLLRDIGAYVTKILTVFGCIGDVKNIGFPLGGTG 373
+ +R +SQ N Y+ + PN+LLLR + +Y+T +L VFG I + IGFP+GG+
Sbjct: 515 EEMRSLVSQCNSYIASRKAAKQPPNRLLLRSVSSYLTAMLKVFGAIEGEEVIGFPIGGSD 574
Query: 374 VESTNLEELVLPYLTILSEFRDNIRTEARLIKSTEILNQCDRLRDEVLPNVGVRLEDIEG 433
S NLE V+PYL +LS+FR+ +R AR K TE+L D LRD+VLP +GVRLED EG
Sbjct: 575 -NSMNLESTVMPYLQVLSQFREGVRQIARQHKVTEVLQLSDLLRDDVLPELGVRLEDHEG 633
Score = 393 (143.4 bits), Expect = 1.7e-63, Sum P(3) = 1.7e-63
Identities = 83/193 (43%), Positives = 121/193 (62%)
Query: 434 KSYITFDILRRILSEYFNYNITYAMNITDIDDKIIKRARQNYLFEKHVQENEIQTSKILK 493
+SYI+FDILRR+L +YF Y++ Y MNITDIDDKIIKRARQ +LF+++ + N + S +L+
Sbjct: 68 RSYISFDILRRVLRDYFKYDVFYCMNITDIDDKIIKRARQRHLFQQYRERNP-RPSDLLQ 126
Query: 494 DIGEVMGAFESKMKLVTDPDKLTMMKNILSNVQEAK---QDISAQPEGTINNIKNVTFQK 550
D+ + F ++ DPDK M++ I +V A QD + ++ ++ Q+
Sbjct: 127 DVSAALTPFLQRISEANDPDKRQMLERIHGSVSAALLPLQD-AVSSNARAEELERLS-QE 184
Query: 551 LLTAVRDPFSDWLDSLHGSSITDNSIFATLPKHWEAEFHKDMADLNKLLTAVRDPLSDWL 610
L+ A D SDWLD HG+ ITDNSIF+ LPKHWE+E+H+DM LN L V +S+++
Sbjct: 185 LMEAAVDLLSDWLDEKHGAQITDNSIFSQLPKHWESEYHRDMEALNVLPPDVLTRVSEYV 244
Query: 611 DSLHG--SSITDN 621
+ I DN
Sbjct: 245 PEIVAFVQRIVDN 257
Score = 333 (122.3 bits), Expect = 1.7e-63, Sum P(3) = 1.7e-63
Identities = 59/87 (67%), Positives = 68/87 (78%)
Query: 778 GDLS--SQEASEKRSPNDFALWKKSKAGEPWWSSPWGEGRPGWHIECSVMASAVLGPQLD 835
GDLS + SEK+SPNDFALWK SK GEP W SPWG+GRPGWHIECS MA ++LG +D
Sbjct: 301 GDLSISADRLSEKQSPNDFALWKASKPGEPSWESPWGKGRPGWHIECSAMAGSILGESMD 360
Query: 836 IHTGGVDLKFPHHDNELAQAEGLPTHD 862
IH GG DL+FPHHDNELAQ+E +D
Sbjct: 361 IHGGGFDLRFPHHDNELAQSEAYFDND 387
Score = 260 (96.6 bits), Expect = 8.8e-49, Sum P(3) = 8.8e-49
Identities = 60/157 (38%), Positives = 92/157 (58%)
Query: 509 VTDPDKLTMMKNILSNVQEAKQDISAQPEGTINNIKNVT--FQKLLTAVRDPFS-DWLDS 565
+TD D + + ++ + ++ + +P + ++ F + ++ DP L+
Sbjct: 94 ITDIDDKIIKRARQRHLFQQYRERNPRPSDLLQDVSAALTPFLQRISEANDPDKRQMLER 153
Query: 566 LHGS-SITDNSIFATLPKHWEAEFHKDMADLNKLLTAVRDPLSDWLDSLHGSSITDNSIF 624
+HGS S + + + AE + ++ +L+ A D LSDWLD HG+ ITDNSIF
Sbjct: 154 IHGSVSAALLPLQDAVSSNARAEELERLSQ--ELMEAAVDLLSDWLDEKHGAQITDNSIF 211
Query: 625 ATLPKHWEAEFHKDMADLNVLPPTVLTRVSEYIPEIV 661
+ LPKHWE+E+H+DM LNVLPP VLTRVSEY+PEIV
Sbjct: 212 SQLPKHWESEYHRDMEALNVLPPDVLTRVSEYVPEIV 248
Score = 243 (90.6 bits), Expect = 1.1e-55, Sum P(3) = 1.1e-55
Identities = 47/71 (66%), Positives = 55/71 (77%)
Query: 118 VLPPTVLTRVSEYIPEIVASYIEKIIANGLAYESNGSVYFNVNAFDSQPNHYYAKLVPEA 177
VLPP VLTRVSEY+PEIVA ++++I+ NG Y SNGSVYF+ F + HYYAKLVPEA
Sbjct: 231 VLPPDVLTRVSEYVPEIVA-FVQRIVDNGYGYVSNGSVYFSTAKFHASEKHYYAKLVPEA 289
Query: 178 YGDTKTLQEGE 188
GD K LQEGE
Sbjct: 290 VGDQKALQEGE 300
Score = 41 (19.5 bits), Expect = 1.7e-63, Sum P(3) = 1.7e-63
Identities = 10/42 (23%), Positives = 12/42 (28%)
Query: 857 GLPTHDQEXXXXXXXXXXXXXXXXXXXXXXYNEYIASVQKAT 898
G PTHD E + EY+ Q T
Sbjct: 704 GFPTHDTEGKELSKGQSKKLRKLYEAQEKLHKEYLQMAQNGT 745
Score = 38 (18.4 bits), Expect = 1.4e-15, Sum P(3) = 1.4e-15
Identities = 10/39 (25%), Positives = 19/39 (48%)
Query: 379 LEELVLPYLTILSEFRDNIRTEARLIKSTEILNQCDRLR 417
L + VLP L + E + + T +L+ +L + + R
Sbjct: 616 LRDDVLPELGVRLEDHEGLPTVVKLVDRETLLKEKEEKR 654
>UNIPROTKB|F1P1D9 [details] [associations]
symbol:CARS "Cysteine--tRNA ligase, cytoplasmic"
species:9031 "Gallus gallus" [GO:0000049 "tRNA binding"
evidence=IEA] [GO:0004817 "cysteine-tRNA ligase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0006423 "cysteinyl-tRNA
aminoacylation" evidence=IEA] [GO:0042803 "protein homodimerization
activity" evidence=IEA] HAMAP:MF_00041 InterPro:IPR009080
InterPro:IPR015803 Pfam:PF01406 GO:GO:0005524 GO:GO:0005737
GO:GO:0000049 Gene3D:3.40.50.620 InterPro:IPR014729 SUPFAM:SSF47323
InterPro:IPR024909 PANTHER:PTHR10890 PRINTS:PR00983 GO:GO:0004817
GO:GO:0006423 TIGRFAMs:TIGR00435 OMA:VARWFRH
GeneTree:ENSGT00390000006347 EMBL:AADN02030397 IPI:IPI00571005
Ensembl:ENSGALT00000010376 ArrayExpress:F1P1D9 Uniprot:F1P1D9
Length = 739
Score = 405 (147.6 bits), Expect = 1.3e-55, Sum P(3) = 1.3e-55
Identities = 84/189 (44%), Positives = 116/189 (61%)
Query: 251 QQSLKLVVIMKEFFLNVKDHIRNLKFPATTVSSFEKWTQADLELSTRFIQTKNNVHAALC 310
+ +++ M EFFLNVKD +R P F+KW + EL+ F K +H ALC
Sbjct: 441 ESAIQYEKFMNEFFLNVKDILRA---PTDVTGQFQKWENQEAELNKNFYDKKAAIHEALC 497
Query: 311 DNMDTRSALDSIRDCISQVNIYL------RGTPNQLLLRDIGAYVTKILTVFGCIGDVKN 364
DN+DTRS L+ +R +SQ N Y+ R PN+LLL +I Y+T++L +FG I
Sbjct: 498 DNVDTRSVLEEMRSLVSQSNSYIAAKKSARQMPNRLLLENISCYLTQMLKIFGAIESDDA 557
Query: 365 IGFPLGGTGVESTNLEELVLPYLTILSEFRDNIRTEARLIKSTEILNQCDRLRDEVLPNV 424
IGFP+GG ++ N+E V+PYL +LSEFR+ +R AR K TE+L D LRD++LP +
Sbjct: 558 IGFPVGGNN-QNINIESTVMPYLQVLSEFREGVRQIAREKKVTEVLQLSDALRDDILPEL 616
Query: 425 GVRLEDIEG 433
GVR ED EG
Sbjct: 617 GVRFEDHEG 625
Score = 394 (143.8 bits), Expect = 1.8e-63, Sum P(3) = 1.8e-63
Identities = 86/192 (44%), Positives = 119/192 (61%)
Query: 434 KSYITFDILRRILSEYFNYNITYAMNITDIDDKIIKRARQNYLFEKHVQENEIQTSKILK 493
+SYI+FDILRRIL +YF +++ Y MNITDIDDKIIKR RQNYLFE++ ++N+ +++L+
Sbjct: 60 RSYISFDILRRILRDYFKFDVFYCMNITDIDDKIIKRTRQNYLFEQY-RKNKSTPAQLLE 118
Query: 494 DIGEVMGAFESKMKLVTDPDKLTMMKNILSNVQEAKQDI--SAQPEGTINNIKNVTFQKL 551
D+ F K+ TDPDK M++ I + V+ A + + Q + I + L
Sbjct: 119 DVKTASELFSVKLSETTDPDKRQMLEKIQNAVKSAFDPLQEAVQAKLPAEEISRC-HEIL 177
Query: 552 LTAVRDPFSDWLDSLHGSSITDNSIFATLPKHWEAEFHKDMADLNKLLTAVRDPLSDWLD 611
L +D SDWLDS GS +TDNSIF+ LPK WE EFHKDM LN L V +S+++
Sbjct: 178 LEEAKDLLSDWLDSKFGSQVTDNSIFSELPKFWEGEFHKDMEALNVLPPDVLTRVSEYVP 237
Query: 612 SLHG--SSITDN 621
+ I DN
Sbjct: 238 EIVAFVKKIVDN 249
Score = 328 (120.5 bits), Expect = 1.8e-63, Sum P(3) = 1.8e-63
Identities = 58/87 (66%), Positives = 66/87 (75%)
Query: 778 GDLS--SQEASEKRSPNDFALWKKSKAGEPWWSSPWGEGRPGWHIECSVMASAVLGPQLD 835
GDLS + EK SPNDFALWK SK GEP W SPWG+GRPGWHIECS MA ++LG +D
Sbjct: 293 GDLSISADRLCEKHSPNDFALWKSSKPGEPSWDSPWGKGRPGWHIECSAMAGSILGESMD 352
Query: 836 IHTGGVDLKFPHHDNELAQAEGLPTHD 862
IH GG DL+FPHHDNELAQ+E +D
Sbjct: 353 IHGGGFDLRFPHHDNELAQSEAYFEND 379
Score = 253 (94.1 bits), Expect = 8.1e-48, Sum P(3) = 8.1e-48
Identities = 63/157 (40%), Positives = 88/157 (56%)
Query: 509 VTDPDKLTMMKNILSNVQEAKQDISAQPEGTINNIKNVT--FQKLLTAVRDPFSDWLDSL 566
+TD D + + + + E + + P + ++K + F L+ DP D L
Sbjct: 86 ITDIDDKIIKRTRQNYLFEQYRKNKSTPAQLLEDVKTASELFSVKLSETTDP--DKRQML 143
Query: 567 HGSSITDNSIFATLPKHWEAEFH-KDMADLNK-LLTAVRDPLSDWLDSLHGSSITDNSIF 624
S F L + +A+ ++++ ++ LL +D LSDWLDS GS +TDNSIF
Sbjct: 144 EKIQNAVKSAFDPLQEAVQAKLPAEEISRCHEILLEEAKDLLSDWLDSKFGSQVTDNSIF 203
Query: 625 ATLPKHWEAEFHKDMADLNVLPPTVLTRVSEYIPEIV 661
+ LPK WE EFHKDM LNVLPP VLTRVSEY+PEIV
Sbjct: 204 SELPKFWEGEFHKDMEALNVLPPDVLTRVSEYVPEIV 240
Score = 238 (88.8 bits), Expect = 1.3e-55, Sum P(3) = 1.3e-55
Identities = 48/71 (67%), Positives = 54/71 (76%)
Query: 118 VLPPTVLTRVSEYIPEIVASYIEKIIANGLAYESNGSVYFNVNAFDSQPNHYYAKLVPEA 177
VLPP VLTRVSEY+PEIVA +++KI+ NG Y SNGSVYF+ F S H YAKLVPEA
Sbjct: 223 VLPPDVLTRVSEYVPEIVA-FVKKIVDNGYGYVSNGSVYFDTVKFGSSEKHSYAKLVPEA 281
Query: 178 YGDTKTLQEGE 188
GD K LQEGE
Sbjct: 282 VGDQKALQEGE 292
Score = 46 (21.3 bits), Expect = 1.3e-55, Sum P(3) = 1.3e-55
Identities = 13/55 (23%), Positives = 15/55 (27%)
Query: 844 KFPHHDNELAQAEGLPTHDQEXXXXXXXXXXXXXXXXXXXXXXYNEYIASVQKAT 898
K H G PTHD E Y EY+ VQ +
Sbjct: 683 KSEHDKYSKFDENGFPTHDTEGKELSKGQIKKLKKLYETQEKLYKEYLQMVQNGS 737
Score = 44 (20.5 bits), Expect = 1.8e-63, Sum P(3) = 1.8e-63
Identities = 11/39 (28%), Positives = 12/39 (30%)
Query: 910 GLPTHDQEXXXXXXXXXXXXXXXXXXXXXXYNEYIASVQ 948
G PTHD E Y EY+ VQ
Sbjct: 696 GFPTHDTEGKELSKGQIKKLKKLYETQEKLYKEYLQMVQ 734
Score = 37 (18.1 bits), Expect = 2.8e-15, Sum P(3) = 2.8e-15
Identities = 9/37 (24%), Positives = 18/37 (48%)
Query: 376 STNLEELVLPYLTILSEFRDNIRTEARLIKSTEILNQ 412
S L + +LP L + E + + T +L+ +L +
Sbjct: 605 SDALRDDILPELGVRFEDHEGLPTVVKLVDKDTLLKE 641
>UNIPROTKB|F1P1E0 [details] [associations]
symbol:CARS "Cysteine--tRNA ligase, cytoplasmic"
species:9031 "Gallus gallus" [GO:0000049 "tRNA binding"
evidence=IEA] [GO:0004817 "cysteine-tRNA ligase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0006423 "cysteinyl-tRNA
aminoacylation" evidence=IEA] [GO:0042803 "protein homodimerization
activity" evidence=IEA] HAMAP:MF_00041 InterPro:IPR009080
InterPro:IPR015803 Pfam:PF01406 GO:GO:0005524 GO:GO:0005737
GO:GO:0000049 Gene3D:3.40.50.620 InterPro:IPR014729 SUPFAM:SSF47323
InterPro:IPR024909 PANTHER:PTHR10890 PRINTS:PR00983 GO:GO:0004817
GO:GO:0006423 IPI:IPI00585125 TIGRFAMs:TIGR00435 OMA:VARWFRH
GeneTree:ENSGT00390000006347 EMBL:AADN02030397
Ensembl:ENSGALT00000010375 ArrayExpress:F1P1E0 Uniprot:F1P1E0
Length = 740
Score = 405 (147.6 bits), Expect = 1.4e-55, Sum P(3) = 1.4e-55
Identities = 84/189 (44%), Positives = 116/189 (61%)
Query: 251 QQSLKLVVIMKEFFLNVKDHIRNLKFPATTVSSFEKWTQADLELSTRFIQTKNNVHAALC 310
+ +++ M EFFLNVKD +R P F+KW + EL+ F K +H ALC
Sbjct: 442 ESAIQYEKFMNEFFLNVKDILRA---PTDVTGQFQKWENQEAELNKNFYDKKAAIHEALC 498
Query: 311 DNMDTRSALDSIRDCISQVNIYL------RGTPNQLLLRDIGAYVTKILTVFGCIGDVKN 364
DN+DTRS L+ +R +SQ N Y+ R PN+LLL +I Y+T++L +FG I
Sbjct: 499 DNVDTRSVLEEMRSLVSQSNSYIAAKKSARQMPNRLLLENISCYLTQMLKIFGAIESDDA 558
Query: 365 IGFPLGGTGVESTNLEELVLPYLTILSEFRDNIRTEARLIKSTEILNQCDRLRDEVLPNV 424
IGFP+GG ++ N+E V+PYL +LSEFR+ +R AR K TE+L D LRD++LP +
Sbjct: 559 IGFPVGGNN-QNINIESTVMPYLQVLSEFREGVRQIAREKKVTEVLQLSDALRDDILPEL 617
Query: 425 GVRLEDIEG 433
GVR ED EG
Sbjct: 618 GVRFEDHEG 626
Score = 394 (143.8 bits), Expect = 1.8e-63, Sum P(3) = 1.8e-63
Identities = 86/192 (44%), Positives = 119/192 (61%)
Query: 434 KSYITFDILRRILSEYFNYNITYAMNITDIDDKIIKRARQNYLFEKHVQENEIQTSKILK 493
+SYI+FDILRRIL +YF +++ Y MNITDIDDKIIKR RQNYLFE++ ++N+ +++L+
Sbjct: 61 RSYISFDILRRILRDYFKFDVFYCMNITDIDDKIIKRTRQNYLFEQY-RKNKSTPAQLLE 119
Query: 494 DIGEVMGAFESKMKLVTDPDKLTMMKNILSNVQEAKQDI--SAQPEGTINNIKNVTFQKL 551
D+ F K+ TDPDK M++ I + V+ A + + Q + I + L
Sbjct: 120 DVKTASELFSVKLSETTDPDKRQMLEKIQNAVKSAFDPLQEAVQAKLPAEEISRC-HEIL 178
Query: 552 LTAVRDPFSDWLDSLHGSSITDNSIFATLPKHWEAEFHKDMADLNKLLTAVRDPLSDWLD 611
L +D SDWLDS GS +TDNSIF+ LPK WE EFHKDM LN L V +S+++
Sbjct: 179 LEEAKDLLSDWLDSKFGSQVTDNSIFSELPKFWEGEFHKDMEALNVLPPDVLTRVSEYVP 238
Query: 612 SLHG--SSITDN 621
+ I DN
Sbjct: 239 EIVAFVKKIVDN 250
Score = 328 (120.5 bits), Expect = 1.8e-63, Sum P(3) = 1.8e-63
Identities = 58/87 (66%), Positives = 66/87 (75%)
Query: 778 GDLS--SQEASEKRSPNDFALWKKSKAGEPWWSSPWGEGRPGWHIECSVMASAVLGPQLD 835
GDLS + EK SPNDFALWK SK GEP W SPWG+GRPGWHIECS MA ++LG +D
Sbjct: 294 GDLSISADRLCEKHSPNDFALWKSSKPGEPSWDSPWGKGRPGWHIECSAMAGSILGESMD 353
Query: 836 IHTGGVDLKFPHHDNELAQAEGLPTHD 862
IH GG DL+FPHHDNELAQ+E +D
Sbjct: 354 IHGGGFDLRFPHHDNELAQSEAYFEND 380
Score = 253 (94.1 bits), Expect = 8.2e-48, Sum P(3) = 8.2e-48
Identities = 63/157 (40%), Positives = 88/157 (56%)
Query: 509 VTDPDKLTMMKNILSNVQEAKQDISAQPEGTINNIKNVT--FQKLLTAVRDPFSDWLDSL 566
+TD D + + + + E + + P + ++K + F L+ DP D L
Sbjct: 87 ITDIDDKIIKRTRQNYLFEQYRKNKSTPAQLLEDVKTASELFSVKLSETTDP--DKRQML 144
Query: 567 HGSSITDNSIFATLPKHWEAEFH-KDMADLNK-LLTAVRDPLSDWLDSLHGSSITDNSIF 624
S F L + +A+ ++++ ++ LL +D LSDWLDS GS +TDNSIF
Sbjct: 145 EKIQNAVKSAFDPLQEAVQAKLPAEEISRCHEILLEEAKDLLSDWLDSKFGSQVTDNSIF 204
Query: 625 ATLPKHWEAEFHKDMADLNVLPPTVLTRVSEYIPEIV 661
+ LPK WE EFHKDM LNVLPP VLTRVSEY+PEIV
Sbjct: 205 SELPKFWEGEFHKDMEALNVLPPDVLTRVSEYVPEIV 241
Score = 238 (88.8 bits), Expect = 1.4e-55, Sum P(3) = 1.4e-55
Identities = 48/71 (67%), Positives = 54/71 (76%)
Query: 118 VLPPTVLTRVSEYIPEIVASYIEKIIANGLAYESNGSVYFNVNAFDSQPNHYYAKLVPEA 177
VLPP VLTRVSEY+PEIVA +++KI+ NG Y SNGSVYF+ F S H YAKLVPEA
Sbjct: 224 VLPPDVLTRVSEYVPEIVA-FVKKIVDNGYGYVSNGSVYFDTVKFGSSEKHSYAKLVPEA 282
Query: 178 YGDTKTLQEGE 188
GD K LQEGE
Sbjct: 283 VGDQKALQEGE 293
Score = 46 (21.3 bits), Expect = 1.4e-55, Sum P(3) = 1.4e-55
Identities = 13/55 (23%), Positives = 15/55 (27%)
Query: 844 KFPHHDNELAQAEGLPTHDQEXXXXXXXXXXXXXXXXXXXXXXYNEYIASVQKAT 898
K H G PTHD E Y EY+ VQ +
Sbjct: 684 KSEHDKYSKFDENGFPTHDTEGKELSKGQIKKLKKLYETQEKLYKEYLQMVQNGS 738
Score = 44 (20.5 bits), Expect = 1.8e-63, Sum P(3) = 1.8e-63
Identities = 11/39 (28%), Positives = 12/39 (30%)
Query: 910 GLPTHDQEXXXXXXXXXXXXXXXXXXXXXXYNEYIASVQ 948
G PTHD E Y EY+ VQ
Sbjct: 697 GFPTHDTEGKELSKGQIKKLKKLYETQEKLYKEYLQMVQ 735
Score = 37 (18.1 bits), Expect = 2.9e-15, Sum P(3) = 2.9e-15
Identities = 9/37 (24%), Positives = 18/37 (48%)
Query: 376 STNLEELVLPYLTILSEFRDNIRTEARLIKSTEILNQ 412
S L + +LP L + E + + T +L+ +L +
Sbjct: 606 SDALRDDILPELGVRFEDHEGLPTVVKLVDKDTLLKE 642
>UNIPROTKB|B4DKY1 [details] [associations]
symbol:CARS "Cysteine--tRNA ligase, cytoplasmic"
species:9606 "Homo sapiens" [GO:0004817 "cysteine-tRNA ligase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0006423 "cysteinyl-tRNA aminoacylation" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IDA] HAMAP:MF_00041
InterPro:IPR009080 InterPro:IPR015803 Pfam:PF01406 GO:GO:0005524
GO:GO:0005737 Gene3D:3.40.50.620 InterPro:IPR014729 SUPFAM:SSF47323
InterPro:IPR024909 PANTHER:PTHR10890 PRINTS:PR00983 GO:GO:0004817
GO:GO:0006423 EMBL:AC108448 HOGENOM:HOG000245252 HOVERGEN:HBG002089
TIGRFAMs:TIGR00435 EMBL:AC131971 UniGene:Hs.274873 HGNC:HGNC:1493
ChiTaRS:CARS EMBL:AK296763 IPI:IPI00909763 SMR:B4DKY1 STRING:B4DKY1
Ensembl:ENST00000401769 UCSC:uc010qxp.2 Uniprot:B4DKY1
Length = 739
Score = 401 (146.2 bits), Expect = 6.4e-54, Sum P(2) = 6.4e-54
Identities = 83/189 (43%), Positives = 116/189 (61%)
Query: 251 QQSLKLVVIMKEFFLNVKDHIRNLKFPATTVSSFEKWTQADLELSTRFIQTKNNVHAALC 310
+ +L+ + EFFLNVKD +R P FEKW + + EL+ F K +H ALC
Sbjct: 463 ESALQYEKFLNEFFLNVKDILRA---PVDITGQFEKWGEEEAELNKNFYDKKTAIHKALC 519
Query: 311 DNMDTRSALDSIRDCISQVNIYL------RGTPNQLLLRDIGAYVTKILTVFGCIGDVKN 364
DN+DTR+ ++ +R +SQ N+Y+ R PNQ LL +I Y+T +L +FG + + +
Sbjct: 520 DNVDTRTVMEEMRALVSQCNLYMAARKAVRKRPNQALLENIALYLTHMLKIFGAVEEDSS 579
Query: 365 IGFPLGGTGVESTNLEELVLPYLTILSEFRDNIRTEARLIKSTEILNQCDRLRDEVLPNV 424
+GFP+GG G S +LE V+PYL +LSEFR+ +R AR K EIL D LRD +LP +
Sbjct: 580 LGFPVGGPGT-SLSLEATVMPYLQVLSEFREGVRKIAREQKVPEILQLSDALRDNILPEL 638
Query: 425 GVRLEDIEG 433
GVR ED EG
Sbjct: 639 GVRFEDHEG 647
Score = 396 (144.5 bits), Expect = 1.9e-63, Sum P(2) = 1.9e-63
Identities = 82/191 (42%), Positives = 119/191 (62%)
Query: 434 KSYITFDILRRILSEYFNYNITYAMNITDIDDKIIKRARQNYLFEKHVQENEIQTSKILK 493
+SYI+FDILRR+L +YF +++ Y MNITDIDDKIIKRARQN+LFE++ +E + +++L+
Sbjct: 82 RSYISFDILRRVLKDYFKFDVFYCMNITDIDDKIIKRARQNHLFEQY-REKRPEAAQLLE 140
Query: 494 DIGEVMGAFESKMKLVTDPDKLTMMKNILSNVQEAKQDISAQPEGTINNIK-NVTFQKLL 552
D+ + F K+ TDPDK M++ I VQ A + + + + + N + LL
Sbjct: 141 DVQAALKPFSVKLNETTDPDKKQMLERIQHAVQLATEPLEKAVQSRLTGEEVNSCVEVLL 200
Query: 553 TAVRDPFSDWLDSLHGSSITDNSIFATLPKHWEAEFHKDMADLNKLLTAVRDPLSDWLDS 612
+D SDWLDS G +TDNSIF+ LPK WE +FH+DM LN L V +S+++
Sbjct: 201 EEAKDLLSDWLDSTLGCDVTDNSIFSKLPKFWEGDFHRDMEALNVLPPDVLTRVSEYVPE 260
Query: 613 LHG--SSITDN 621
+ I DN
Sbjct: 261 IVNFVQKIVDN 271
Score = 328 (120.5 bits), Expect = 1.9e-63, Sum P(2) = 1.9e-63
Identities = 59/87 (67%), Positives = 66/87 (75%)
Query: 778 GDLS--SQEASEKRSPNDFALWKKSKAGEPWWSSPWGEGRPGWHIECSVMASAVLGPQLD 835
GDLS + SEKRSPNDFALWK SK GEP W PWG+GRPGWHIECS MA +LG +D
Sbjct: 315 GDLSISADRLSEKRSPNDFALWKASKPGEPSWPCPWGKGRPGWHIECSAMAGTLLGASMD 374
Query: 836 IHTGGVDLKFPHHDNELAQAEGLPTHD 862
IH GG DL+FPHHDNELAQ+E +D
Sbjct: 375 IHGGGFDLRFPHHDNELAQSEAYFEND 401
Score = 234 (87.4 bits), Expect = 9.2e-46, Sum P(2) = 9.2e-46
Identities = 44/64 (68%), Positives = 50/64 (78%)
Query: 598 LLTAVRDPLSDWLDSLHGSSITDNSIFATLPKHWEAEFHKDMADLNVLPPTVLTRVSEYI 657
LL +D LSDWLDS G +TDNSIF+ LPK WE +FH+DM LNVLPP VLTRVSEY+
Sbjct: 199 LLEEAKDLLSDWLDSTLGCDVTDNSIFSKLPKFWEGDFHRDMEALNVLPPDVLTRVSEYV 258
Query: 658 PEIV 661
PEIV
Sbjct: 259 PEIV 262
Score = 232 (86.7 bits), Expect = 6.4e-54, Sum P(2) = 6.4e-54
Identities = 46/71 (64%), Positives = 53/71 (74%)
Query: 118 VLPPTVLTRVSEYIPEIVASYIEKIIANGLAYESNGSVYFNVNAFDSQPNHYYAKLVPEA 177
VLPP VLTRVSEY+PEIV ++++KI+ NG Y SNGSVYF+ F S H Y KLVPEA
Sbjct: 245 VLPPDVLTRVSEYVPEIV-NFVQKIVDNGYGYVSNGSVYFDTAKFASSEKHSYGKLVPEA 303
Query: 178 YGDTKTLQEGE 188
GD K LQEGE
Sbjct: 304 VGDQKALQEGE 314
Score = 40 (19.1 bits), Expect = 8.5e-15, Sum P(2) = 8.5e-15
Identities = 10/42 (23%), Positives = 20/42 (47%)
Query: 376 STNLEELVLPYLTILSEFRDNIRTEARLIKSTEILNQCDRLR 417
S L + +LP L + E + + T +L+ +L + + R
Sbjct: 627 SDALRDNILPELGVRFEDHEGLPTVVKLVDRNTLLKEREEKR 668
Score = 39 (18.8 bits), Expect = 1.1e-14, Sum P(2) = 1.1e-14
Identities = 13/44 (29%), Positives = 21/44 (47%)
Query: 376 STNLEELVLPYLTILSEFRDNIRTEARLIKSTEILNQCDRLRDE 419
S+N E L Y L+EF N++ R +I Q ++ +E
Sbjct: 458 SSNTMESALQYEKFLNEFFLNVKDILRA--PVDITGQFEKWGEE 499
>UNIPROTKB|Q5F408 [details] [associations]
symbol:CARS "Cysteine--tRNA ligase, cytoplasmic"
species:9031 "Gallus gallus" [GO:0046872 "metal ion binding"
evidence=IEA] [GO:0004817 "cysteine-tRNA ligase activity"
evidence=ISS;IBA] [GO:0005829 "cytosol" evidence=IBA] [GO:0006423
"cysteinyl-tRNA aminoacylation" evidence=ISS;IBA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0042803 "protein homodimerization
activity" evidence=IEA] [GO:0005737 "cytoplasm" evidence=ISS]
[GO:0000049 "tRNA binding" evidence=ISS] InterPro:IPR009080
InterPro:IPR015803 PROSITE:PS00178 Pfam:PF01406 GO:GO:0005829
GO:GO:0005524 GO:GO:0046872 GO:GO:0000049 Gene3D:3.40.50.620
InterPro:IPR014729 SUPFAM:SSF47323 eggNOG:COG0215
InterPro:IPR024909 PANTHER:PTHR10890 PRINTS:PR00983 GO:GO:0004817
GO:GO:0006423 EMBL:AJ851492 IPI:IPI00585125 RefSeq:NP_001012601.1
UniGene:Gga.22936 HSSP:P21888 ProteinModelPortal:Q5F408
STRING:Q5F408 GeneID:423086 KEGG:gga:423086 CTD:833
HOGENOM:HOG000245252 HOVERGEN:HBG002089 InParanoid:Q5F408 KO:K01883
NextBio:20825608 ArrayExpress:Q5F408 TIGRFAMs:TIGR00435
Uniprot:Q5F408
Length = 748
Score = 405 (147.6 bits), Expect = 1.5e-55, Sum P(3) = 1.5e-55
Identities = 84/189 (44%), Positives = 116/189 (61%)
Query: 251 QQSLKLVVIMKEFFLNVKDHIRNLKFPATTVSSFEKWTQADLELSTRFIQTKNNVHAALC 310
+ +++ M EFFLNVKD +R P F+KW + EL+ F K +H ALC
Sbjct: 450 ESAIQYEKFMNEFFLNVKDILRA---PTDVTGQFQKWENQEAELNKNFYDKKAAIHEALC 506
Query: 311 DNMDTRSALDSIRDCISQVNIYL------RGTPNQLLLRDIGAYVTKILTVFGCIGDVKN 364
DN+DTRS L+ +R +SQ N Y+ R PN+LLL +I Y+T++L +FG I
Sbjct: 507 DNVDTRSVLEEMRSLVSQSNSYIAAKKSARQMPNRLLLENISCYLTQMLKIFGAIESDDA 566
Query: 365 IGFPLGGTGVESTNLEELVLPYLTILSEFRDNIRTEARLIKSTEILNQCDRLRDEVLPNV 424
IGFP+GG ++ N+E V+PYL +LSEFR+ +R AR K TE+L D LRD++LP +
Sbjct: 567 IGFPVGGNN-QNINIESTVMPYLQVLSEFREGVRQIAREKKVTEVLQLSDALRDDILPEL 625
Query: 425 GVRLEDIEG 433
GVR ED EG
Sbjct: 626 GVRFEDHEG 634
Score = 394 (143.8 bits), Expect = 2.0e-63, Sum P(3) = 2.0e-63
Identities = 86/192 (44%), Positives = 119/192 (61%)
Query: 434 KSYITFDILRRILSEYFNYNITYAMNITDIDDKIIKRARQNYLFEKHVQENEIQTSKILK 493
+SYI+FDILRRIL +YF +++ Y MNITDIDDKIIKR RQNYLFE++ ++N+ +++L+
Sbjct: 69 RSYISFDILRRILRDYFKFDVFYCMNITDIDDKIIKRTRQNYLFEQY-RKNKSTPAQLLE 127
Query: 494 DIGEVMGAFESKMKLVTDPDKLTMMKNILSNVQEAKQDI--SAQPEGTINNIKNVTFQKL 551
D+ F K+ TDPDK M++ I + V+ A + + Q + I + L
Sbjct: 128 DVKTASELFSVKLSETTDPDKRQMLEKIQNAVKSAFDPLQEAVQAKLPAEEISRC-HEIL 186
Query: 552 LTAVRDPFSDWLDSLHGSSITDNSIFATLPKHWEAEFHKDMADLNKLLTAVRDPLSDWLD 611
L +D SDWLDS GS +TDNSIF+ LPK WE EFHKDM LN L V +S+++
Sbjct: 187 LEEAKDLLSDWLDSKFGSQVTDNSIFSELPKFWEGEFHKDMEALNVLPPDVLTRVSEYVP 246
Query: 612 SLHG--SSITDN 621
+ I DN
Sbjct: 247 EIVAFVKKIVDN 258
Score = 328 (120.5 bits), Expect = 2.0e-63, Sum P(3) = 2.0e-63
Identities = 58/87 (66%), Positives = 66/87 (75%)
Query: 778 GDLS--SQEASEKRSPNDFALWKKSKAGEPWWSSPWGEGRPGWHIECSVMASAVLGPQLD 835
GDLS + EK SPNDFALWK SK GEP W SPWG+GRPGWHIECS MA ++LG +D
Sbjct: 302 GDLSISADRLCEKHSPNDFALWKSSKPGEPSWDSPWGKGRPGWHIECSAMAGSILGESMD 361
Query: 836 IHTGGVDLKFPHHDNELAQAEGLPTHD 862
IH GG DL+FPHHDNELAQ+E +D
Sbjct: 362 IHGGGFDLRFPHHDNELAQSEAYFEND 388
Score = 253 (94.1 bits), Expect = 8.8e-48, Sum P(3) = 8.8e-48
Identities = 63/157 (40%), Positives = 88/157 (56%)
Query: 509 VTDPDKLTMMKNILSNVQEAKQDISAQPEGTINNIKNVT--FQKLLTAVRDPFSDWLDSL 566
+TD D + + + + E + + P + ++K + F L+ DP D L
Sbjct: 95 ITDIDDKIIKRTRQNYLFEQYRKNKSTPAQLLEDVKTASELFSVKLSETTDP--DKRQML 152
Query: 567 HGSSITDNSIFATLPKHWEAEFH-KDMADLNK-LLTAVRDPLSDWLDSLHGSSITDNSIF 624
S F L + +A+ ++++ ++ LL +D LSDWLDS GS +TDNSIF
Sbjct: 153 EKIQNAVKSAFDPLQEAVQAKLPAEEISRCHEILLEEAKDLLSDWLDSKFGSQVTDNSIF 212
Query: 625 ATLPKHWEAEFHKDMADLNVLPPTVLTRVSEYIPEIV 661
+ LPK WE EFHKDM LNVLPP VLTRVSEY+PEIV
Sbjct: 213 SELPKFWEGEFHKDMEALNVLPPDVLTRVSEYVPEIV 249
Score = 238 (88.8 bits), Expect = 1.5e-55, Sum P(3) = 1.5e-55
Identities = 48/71 (67%), Positives = 54/71 (76%)
Query: 118 VLPPTVLTRVSEYIPEIVASYIEKIIANGLAYESNGSVYFNVNAFDSQPNHYYAKLVPEA 177
VLPP VLTRVSEY+PEIVA +++KI+ NG Y SNGSVYF+ F S H YAKLVPEA
Sbjct: 232 VLPPDVLTRVSEYVPEIVA-FVKKIVDNGYGYVSNGSVYFDTVKFGSSEKHSYAKLVPEA 290
Query: 178 YGDTKTLQEGE 188
GD K LQEGE
Sbjct: 291 VGDQKALQEGE 301
Score = 46 (21.3 bits), Expect = 1.5e-55, Sum P(3) = 1.5e-55
Identities = 13/55 (23%), Positives = 15/55 (27%)
Query: 844 KFPHHDNELAQAEGLPTHDQEXXXXXXXXXXXXXXXXXXXXXXYNEYIASVQKAT 898
K H G PTHD E Y EY+ VQ +
Sbjct: 692 KSEHDKYSKFDENGFPTHDTEGKELSKGQIKKLKKLYETQEKLYKEYLQMVQNGS 746
Score = 44 (20.5 bits), Expect = 2.0e-63, Sum P(3) = 2.0e-63
Identities = 11/39 (28%), Positives = 12/39 (30%)
Query: 910 GLPTHDQEXXXXXXXXXXXXXXXXXXXXXXYNEYIASVQ 948
G PTHD E Y EY+ VQ
Sbjct: 705 GFPTHDTEGKELSKGQIKKLKKLYETQEKLYKEYLQMVQ 743
Score = 37 (18.1 bits), Expect = 3.0e-15, Sum P(3) = 3.0e-15
Identities = 9/37 (24%), Positives = 18/37 (48%)
Query: 376 STNLEELVLPYLTILSEFRDNIRTEARLIKSTEILNQ 412
S L + +LP L + E + + T +L+ +L +
Sbjct: 614 SDALRDDILPELGVRFEDHEGLPTVVKLVDKDTLLKE 650
>UNIPROTKB|Q7ZWR2 [details] [associations]
symbol:cars "Cysteine--tRNA ligase, cytoplasmic"
species:8355 "Xenopus laevis" [GO:0000049 "tRNA binding"
evidence=ISS] [GO:0004817 "cysteine-tRNA ligase activity"
evidence=ISS] [GO:0005737 "cytoplasm" evidence=ISS] [GO:0006423
"cysteinyl-tRNA aminoacylation" evidence=ISS] InterPro:IPR009080
InterPro:IPR015803 PROSITE:PS00178 Pfam:PF01406 GO:GO:0005524
GO:GO:0005737 GO:GO:0046872 GO:GO:0000049 Gene3D:3.40.50.620
InterPro:IPR014729 SUPFAM:SSF47323 InterPro:IPR024909
PANTHER:PTHR10890 PRINTS:PR00983 GO:GO:0004817 GO:GO:0006423
HSSP:P21888 CTD:833 HOVERGEN:HBG002089 KO:K01883 TIGRFAMs:TIGR00435
EMBL:BC046746 RefSeq:NP_001080786.1 UniGene:Xl.13786
ProteinModelPortal:Q7ZWR2 GeneID:380479 KEGG:xla:380479
Xenbase:XB-GENE-5825997 Uniprot:Q7ZWR2
Length = 747
Score = 398 (145.2 bits), Expect = 1.4e-54, Sum P(3) = 1.4e-54
Identities = 84/180 (46%), Positives = 113/180 (62%)
Query: 260 MKEFFLNVKDHIRNLKFPATTVSSFEKWTQADLELSTRFIQTKNNVHAALCDNMDTRSAL 319
M EFFLNVKD +R P F KW ++EL+ F K +H ALCDN+DTR+ +
Sbjct: 458 MNEFFLNVKDLLRA---PTDITGQFVKWEVLEIELNNCFYSKKAAIHEALCDNIDTRTVM 514
Query: 320 DSIRDCISQVNIYLRGT------PNQLLLRDIGAYVTKILTVFGCIGDVKNIGFPLGGTG 373
+ +R +SQ N Y+ PN++LLR I +Y+T +L VFG I + IGFP+GG+
Sbjct: 515 EEMRSLVSQCNSYIASKKVAKQFPNRMLLRSISSYLTSMLKVFGAIEGEEVIGFPIGGSE 574
Query: 374 VESTNLEELVLPYLTILSEFRDNIRTEARLIKSTEILNQCDRLRDEVLPNVGVRLEDIEG 433
S NLE V+PYL +LS+FR+ +R AR K TE+L D LRD++LP +GVRLED EG
Sbjct: 575 -NSMNLESTVMPYLQVLSQFREGVRQIARQHKVTEVLQLSDLLRDDILPELGVRLEDHEG 633
Score = 376 (137.4 bits), Expect = 8.8e-62, Sum P(3) = 8.8e-62
Identities = 84/193 (43%), Positives = 116/193 (60%)
Query: 434 KSYITFDILRRILSEYFNYNITYAMNITDIDDKIIKRARQNYLFEKHVQENEIQTSKILK 493
+SYI+FDILRR+L +YF Y++ Y MNITDIDDKIIKRARQ +LF+++ + N S +L+
Sbjct: 68 RSYISFDILRRVLRDYFKYDVFYCMNITDIDDKIIKRARQRHLFQQYRESNPPH-SDLLQ 126
Query: 494 DIGEVMGAFESKMKLVTDPDKLTMMKNILSNVQEAK---QDISAQPEGTINNIKNVTFQK 550
D+ + F ++ DPDK M++ I + V A QD + G K+ Q
Sbjct: 127 DVNTALIPFLQRISETNDPDKKQMLERIQTAVSAALLPLQDALNKNTGAEELQKHS--QV 184
Query: 551 LLTAVRDPFSDWLDSLHGSSITDNSIFATLPKHWEAEFHKDMADLNKLLTAVRDPLSDWL 610
L+ A D SDWLD HG+ I DNSIF+ LPK+WE E+HKDM LN L V +S+++
Sbjct: 185 LMEAAVDLLSDWLDEKHGAQIADNSIFSQLPKYWEGEYHKDMEALNVLTPDVLTRVSEYV 244
Query: 611 DSLHG--SSITDN 621
+ I DN
Sbjct: 245 PEIVAFVQKIVDN 257
Score = 333 (122.3 bits), Expect = 8.8e-62, Sum P(3) = 8.8e-62
Identities = 59/87 (67%), Positives = 68/87 (78%)
Query: 778 GDLS--SQEASEKRSPNDFALWKKSKAGEPWWSSPWGEGRPGWHIECSVMASAVLGPQLD 835
GDLS + SEK+SPNDFALWK SK GEP W SPWG+GRPGWHIECS MA ++LG +D
Sbjct: 301 GDLSISADRLSEKQSPNDFALWKASKPGEPSWESPWGKGRPGWHIECSAMAGSILGESMD 360
Query: 836 IHTGGVDLKFPHHDNELAQAEGLPTHD 862
IH GG DL+FPHHDNELAQ+E +D
Sbjct: 361 IHGGGFDLRFPHHDNELAQSEAYFDND 387
Score = 239 (89.2 bits), Expect = 1.4e-54, Sum P(3) = 1.4e-54
Identities = 47/71 (66%), Positives = 54/71 (76%)
Query: 118 VLPPTVLTRVSEYIPEIVASYIEKIIANGLAYESNGSVYFNVNAFDSQPNHYYAKLVPEA 177
VL P VLTRVSEY+PEIVA +++KI+ NG Y SNGSVYF+ F NH+YAKLVPEA
Sbjct: 231 VLTPDVLTRVSEYVPEIVA-FVQKIVDNGYGYVSNGSVYFSTAKFHDSENHFYAKLVPEA 289
Query: 178 YGDTKTLQEGE 188
GD K LQEGE
Sbjct: 290 VGDQKALQEGE 300
Score = 234 (87.4 bits), Expect = 2.2e-46, Sum P(3) = 2.2e-46
Identities = 44/64 (68%), Positives = 50/64 (78%)
Query: 598 LLTAVRDPLSDWLDSLHGSSITDNSIFATLPKHWEAEFHKDMADLNVLPPTVLTRVSEYI 657
L+ A D LSDWLD HG+ I DNSIF+ LPK+WE E+HKDM LNVL P VLTRVSEY+
Sbjct: 185 LMEAAVDLLSDWLDEKHGAQIADNSIFSQLPKYWEGEYHKDMEALNVLTPDVLTRVSEYV 244
Query: 658 PEIV 661
PEIV
Sbjct: 245 PEIV 248
Score = 62 (26.9 bits), Expect = 1.7e-28, Sum P(3) = 1.7e-28
Identities = 20/89 (22%), Positives = 37/89 (41%)
Query: 429 EDIEGKSYITFDILRRILSEYFNYNITYAMNITDIDDKIIKRARQNYLFEK-HVQENEIQ 487
+D+E + +T D+L R+ SEY + + I D + + K H EN
Sbjct: 224 KDMEALNVLTPDVLTRV-SEYVPEIVAFVQKIVDNGYGYVSNGSVYFSTAKFHDSENHFY 282
Query: 488 TSKILKDIGEVMGAFESKMKLVTDPDKLT 516
+ + +G+ E + L D+L+
Sbjct: 283 AKLVPEAVGDQKALQEGEGDLSISADRLS 311
Score = 44 (20.5 bits), Expect = 8.8e-62, Sum P(3) = 8.8e-62
Identities = 11/42 (26%), Positives = 13/42 (30%)
Query: 857 GLPTHDQEXXXXXXXXXXXXXXXXXXXXXXYNEYIASVQKAT 898
G PTHD E + EY+ VQ T
Sbjct: 704 GFPTHDTEGKELSKGQTKKLRKLFEVQEKLHKEYLQMVQNGT 745
Score = 39 (18.8 bits), Expect = 2.9e-61, Sum P(3) = 2.9e-61
Identities = 10/39 (25%), Positives = 12/39 (30%)
Query: 910 GLPTHDQEXXXXXXXXXXXXXXXXXXXXXXYNEYIASVQ 948
G PTHD E + EY+ VQ
Sbjct: 704 GFPTHDTEGKELSKGQTKKLRKLFEVQEKLHKEYLQMVQ 742
Score = 37 (18.1 bits), Expect = 2.3e-15, Sum P(3) = 2.3e-15
Identities = 9/39 (23%), Positives = 19/39 (48%)
Query: 379 LEELVLPYLTILSEFRDNIRTEARLIKSTEILNQCDRLR 417
L + +LP L + E + + T +L+ +L + + R
Sbjct: 616 LRDDILPELGVRLEDHEGLPTVVKLVDRETLLKEKEEKR 654
>UNIPROTKB|Q965I6 [details] [associations]
symbol:cars-1 "Protein CARS-1, isoform b" species:6239
"Caenorhabditis elegans" [GO:0006423 "cysteinyl-tRNA
aminoacylation" evidence=IBA] [GO:0005829 "cytosol" evidence=IBA]
[GO:0004817 "cysteine-tRNA ligase activity" evidence=IBA]
HAMAP:MF_00041 InterPro:IPR009080 InterPro:IPR015803 Pfam:PF01406
GO:GO:0005829 GO:GO:0005524 GO:GO:0009792 GO:GO:0040007
GO:GO:0040010 GO:GO:0006915 GO:GO:0002119 GO:GO:0018996
GO:GO:0000003 Gene3D:3.40.50.620 InterPro:IPR014729 SUPFAM:SSF47323
InterPro:IPR024909 PANTHER:PTHR10890 PRINTS:PR00983 GO:GO:0004817
GO:GO:0006423 HSSP:P21888 HOGENOM:HOG000245252 KO:K01883
TIGRFAMs:TIGR00435 GeneTree:ENSGT00390000006347 EMBL:FO081344
UniGene:Cel.6428 GeneID:171821 KEGG:cel:CELE_Y23H5A.7
UCSC:Y23H5A.7b CTD:171821 NextBio:872849 RefSeq:NP_491014.1
ProteinModelPortal:Q965I6 SMR:Q965I6 STRING:Q965I6 PRIDE:Q965I6
EnsemblMetazoa:Y23H5A.7b WormBase:Y23H5A.7b ArrayExpress:Q965I6
Uniprot:Q965I6
Length = 908
Score = 334 (122.6 bits), Expect = 4.8e-44, Sum P(2) = 4.8e-44
Identities = 91/267 (34%), Positives = 143/267 (53%)
Query: 248 SQKQQSLKLVVIMKEFFLNVKDHIRNLKFPATTVSSFEKWTQADLELSTRFIQTKNNVHA 307
S +++L+ I EFFL VKD +R P + ++K+ +L+L F + K+ VH
Sbjct: 608 STMERALQFEKITNEFFLLVKDFLRRHYKPDRS-EGYQKFQGKELKLMEEFGKLKSEVHE 666
Query: 308 ALCDNMDTRSALDSIRDCISQVNIYL-----RG-TPNQLLLRDIGAYVTKILTVFGCIGD 361
ALCD++DTRS ++ R+ IS N Y+ G PN LLLR+I AY+T +L +FG I
Sbjct: 667 ALCDSVDTRSVIEKFRELISLGNAYIVEKEKEGHVPNCLLLRNIAAYITNLLKIFGAIPQ 726
Query: 362 V-KNIGF----PLGGTGVEST-NLEELVLPYLTILSEFRDNIRTEARLIKSTEILNQCDR 415
+ IGF G G ++ N E +V+PYL L++FR+ +R A+ K IL +CD
Sbjct: 727 SNQEIGFVSEDECNGEGASTSFNKEAVVMPYLDALAQFREKVRLIAKEHKVNGILEECDT 786
Query: 416 LRDEVLPNVGVRLEDIEGKSYITFDILRRILSEYFNYNITYAMNITDIDDKIIKRARQNY 475
LRD+ L +GVRLED G++ + +L E + + DK ++AR+
Sbjct: 787 LRDKTLTELGVRLEDRNGQTVVKLVDRATLLREQEQKDTEKKRKDKEKADKE-QKAREKA 845
Query: 476 LFEKHVQENEIQTSKILKDIGEVMGAF 502
+K +I+ ++ K GE +G +
Sbjct: 846 --DKEAAAKKIKPEELFKQ-GEHVGKY 869
Score = 325 (119.5 bits), Expect = 3.1e-53, Sum P(2) = 3.1e-53
Identities = 55/77 (71%), Positives = 61/77 (79%)
Query: 780 LSSQEASEKRSPNDFALWKKSKAGEPWWSSPWGEGRPGWHIECSVMASAVLGPQLDIHTG 839
+S KRSPNDFALWK SK GEP+W S WG GRPGWHIECSVM+SA+ G +LDIH G
Sbjct: 467 MSDDRLKSKRSPNDFALWKSSKDGEPFWPSEWGNGRPGWHIECSVMSSAICGSKLDIHAG 526
Query: 840 GVDLKFPHHDNELAQAE 856
G DLKFPHHDNE+AQ E
Sbjct: 527 GFDLKFPHHDNEIAQVE 543
Score = 312 (114.9 bits), Expect = 3.1e-53, Sum P(2) = 3.1e-53
Identities = 64/178 (35%), Positives = 103/178 (57%)
Query: 434 KSYITFDILRRILSEYFNYNITYAMNITDIDDKIIKRARQNYLFEKHVQENEIQ-TSKIL 492
+SY++ DILRR+ +YF Y++ + MNITD+DDKIIKRARQ++L + + E++ K+
Sbjct: 223 RSYLSLDILRRVFRDYFGYDVEFIMNITDVDDKIIKRARQSHLLKSYFNESQAPPVMKVC 282
Query: 493 KDIGEVMGAFESKMKLVTDPDKLTMMKNILSNVQEAKQDISAQPEGTINNIKNVTFQKLL 552
+D+ + F++K + DPDK M + ++ VQ+ + + + +LL
Sbjct: 283 EDVVAALEHFKTKFETEMDPDKKKMFEVMIKKVQQQSSALEEAMKAQDSIATEEAKGRLL 342
Query: 553 TAVRDPFSDWLDSLHGSSITDNSIFATLPKHWEAEFHKDMADLNKLLTAVRDPLSDWL 610
RD S+WLD HG + D+S+F L K +E EF DMA LN L V +S+++
Sbjct: 343 NESRDVLSEWLDHNHGKDVRDHSVFDDLAKTYEKEFLADMARLNVLPVDVLTRVSEYV 400
Score = 215 (80.7 bits), Expect = 4.8e-44, Sum P(2) = 4.8e-44
Identities = 40/64 (62%), Positives = 53/64 (82%)
Query: 118 VLPPTVLTRVSEYIPEIVASYIEKIIANGLAYES-NGSVYFNVNAFDSQPNHYYAKLVPE 176
VLP VLTRVSEY+PE++ +Y++KII+NG AY + +GSVYF+ AF+ P H+YAKLVPE
Sbjct: 387 VLPVDVLTRVSEYVPEVI-TYVKKIISNGYAYAAEDGSVYFDTKAFEQNPKHFYAKLVPE 445
Query: 177 AYGD 180
AYG+
Sbjct: 446 AYGE 449
Score = 189 (71.6 bits), Expect = 2.6e-40, Sum P(2) = 2.6e-40
Identities = 37/65 (56%), Positives = 46/65 (70%)
Query: 597 KLLTAVRDPLSDWLDSLHGSSITDNSIFATLPKHWEAEFHKDMADLNVLPPTVLTRVSEY 656
+LL RD LS+WLD HG + D+S+F L K +E EF DMA LNVLP VLTRVSEY
Sbjct: 340 RLLNESRDVLSEWLDHNHGKDVRDHSVFDDLAKTYEKEFLADMARLNVLPVDVLTRVSEY 399
Query: 657 IPEIV 661
+PE++
Sbjct: 400 VPEVI 404
>WB|WBGene00000800 [details] [associations]
symbol:cars-1 species:6239 "Caenorhabditis elegans"
[GO:0004817 "cysteine-tRNA ligase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0006423 "cysteinyl-tRNA
aminoacylation" evidence=IEA] [GO:0040010 "positive regulation of
growth rate" evidence=IMP] [GO:0009792 "embryo development ending
in birth or egg hatching" evidence=IMP] [GO:0002119 "nematode
larval development" evidence=IMP] [GO:0018996 "molting cycle,
collagen and cuticulin-based cuticle" evidence=IMP] [GO:0040007
"growth" evidence=IMP] [GO:0006915 "apoptotic process"
evidence=IMP] [GO:0000003 "reproduction" evidence=IMP]
HAMAP:MF_00041 InterPro:IPR009080 InterPro:IPR015803 Pfam:PF01406
GO:GO:0005829 GO:GO:0005524 GO:GO:0009792 GO:GO:0040007
GO:GO:0040010 GO:GO:0006915 GO:GO:0002119 GO:GO:0018996
GO:GO:0000003 Gene3D:3.40.50.620 InterPro:IPR014729 SUPFAM:SSF47323
eggNOG:COG0215 InterPro:IPR024909 PANTHER:PTHR10890 PRINTS:PR00983
GO:GO:0004817 GO:GO:0006423 HSSP:P21888 HOGENOM:HOG000245252
KO:K01883 TIGRFAMs:TIGR00435 GeneTree:ENSGT00390000006347
OMA:KQWVNYF EMBL:FO081344 PIR:H87729 RefSeq:NP_491013.1
UniGene:Cel.6428 ProteinModelPortal:O76618 SMR:O76618 STRING:O76618
PaxDb:O76618 PRIDE:O76618 EnsemblMetazoa:Y23H5A.7a GeneID:171821
KEGG:cel:CELE_Y23H5A.7 UCSC:Y23H5A.7b CTD:171821 WormBase:Y23H5A.7a
InParanoid:O76618 NextBio:872849 ArrayExpress:O76618 Uniprot:O76618
Length = 909
Score = 334 (122.6 bits), Expect = 4.8e-44, Sum P(2) = 4.8e-44
Identities = 91/267 (34%), Positives = 143/267 (53%)
Query: 248 SQKQQSLKLVVIMKEFFLNVKDHIRNLKFPATTVSSFEKWTQADLELSTRFIQTKNNVHA 307
S +++L+ I EFFL VKD +R P + ++K+ +L+L F + K+ VH
Sbjct: 609 STMERALQFEKITNEFFLLVKDFLRRHYKPDRS-EGYQKFQGKELKLMEEFGKLKSEVHE 667
Query: 308 ALCDNMDTRSALDSIRDCISQVNIYL-----RG-TPNQLLLRDIGAYVTKILTVFGCIGD 361
ALCD++DTRS ++ R+ IS N Y+ G PN LLLR+I AY+T +L +FG I
Sbjct: 668 ALCDSVDTRSVIEKFRELISLGNAYIVEKEKEGHVPNCLLLRNIAAYITNLLKIFGAIPQ 727
Query: 362 V-KNIGF----PLGGTGVEST-NLEELVLPYLTILSEFRDNIRTEARLIKSTEILNQCDR 415
+ IGF G G ++ N E +V+PYL L++FR+ +R A+ K IL +CD
Sbjct: 728 SNQEIGFVSEDECNGEGASTSFNKEAVVMPYLDALAQFREKVRLIAKEHKVNGILEECDT 787
Query: 416 LRDEVLPNVGVRLEDIEGKSYITFDILRRILSEYFNYNITYAMNITDIDDKIIKRARQNY 475
LRD+ L +GVRLED G++ + +L E + + DK ++AR+
Sbjct: 788 LRDKTLTELGVRLEDRNGQTVVKLVDRATLLREQEQKDTEKKRKDKEKADKE-QKAREKA 846
Query: 476 LFEKHVQENEIQTSKILKDIGEVMGAF 502
+K +I+ ++ K GE +G +
Sbjct: 847 --DKEAAAKKIKPEELFKQ-GEHVGKY 870
Score = 325 (119.5 bits), Expect = 3.1e-53, Sum P(2) = 3.1e-53
Identities = 55/77 (71%), Positives = 61/77 (79%)
Query: 780 LSSQEASEKRSPNDFALWKKSKAGEPWWSSPWGEGRPGWHIECSVMASAVLGPQLDIHTG 839
+S KRSPNDFALWK SK GEP+W S WG GRPGWHIECSVM+SA+ G +LDIH G
Sbjct: 468 MSDDRLKSKRSPNDFALWKSSKDGEPFWPSEWGNGRPGWHIECSVMSSAICGSKLDIHAG 527
Query: 840 GVDLKFPHHDNELAQAE 856
G DLKFPHHDNE+AQ E
Sbjct: 528 GFDLKFPHHDNEIAQVE 544
Score = 312 (114.9 bits), Expect = 3.1e-53, Sum P(2) = 3.1e-53
Identities = 64/178 (35%), Positives = 103/178 (57%)
Query: 434 KSYITFDILRRILSEYFNYNITYAMNITDIDDKIIKRARQNYLFEKHVQENEIQ-TSKIL 492
+SY++ DILRR+ +YF Y++ + MNITD+DDKIIKRARQ++L + + E++ K+
Sbjct: 224 RSYLSLDILRRVFRDYFGYDVEFIMNITDVDDKIIKRARQSHLLKSYFNESQAPPVMKVC 283
Query: 493 KDIGEVMGAFESKMKLVTDPDKLTMMKNILSNVQEAKQDISAQPEGTINNIKNVTFQKLL 552
+D+ + F++K + DPDK M + ++ VQ+ + + + +LL
Sbjct: 284 EDVVAALEHFKTKFETEMDPDKKKMFEVMIKKVQQQSSALEEAMKAQDSIATEEAKGRLL 343
Query: 553 TAVRDPFSDWLDSLHGSSITDNSIFATLPKHWEAEFHKDMADLNKLLTAVRDPLSDWL 610
RD S+WLD HG + D+S+F L K +E EF DMA LN L V +S+++
Sbjct: 344 NESRDVLSEWLDHNHGKDVRDHSVFDDLAKTYEKEFLADMARLNVLPVDVLTRVSEYV 401
Score = 215 (80.7 bits), Expect = 4.8e-44, Sum P(2) = 4.8e-44
Identities = 40/64 (62%), Positives = 53/64 (82%)
Query: 118 VLPPTVLTRVSEYIPEIVASYIEKIIANGLAYES-NGSVYFNVNAFDSQPNHYYAKLVPE 176
VLP VLTRVSEY+PE++ +Y++KII+NG AY + +GSVYF+ AF+ P H+YAKLVPE
Sbjct: 388 VLPVDVLTRVSEYVPEVI-TYVKKIISNGYAYAAEDGSVYFDTKAFEQNPKHFYAKLVPE 446
Query: 177 AYGD 180
AYG+
Sbjct: 447 AYGE 450
Score = 189 (71.6 bits), Expect = 2.6e-40, Sum P(2) = 2.6e-40
Identities = 37/65 (56%), Positives = 46/65 (70%)
Query: 597 KLLTAVRDPLSDWLDSLHGSSITDNSIFATLPKHWEAEFHKDMADLNVLPPTVLTRVSEY 656
+LL RD LS+WLD HG + D+S+F L K +E EF DMA LNVLP VLTRVSEY
Sbjct: 341 RLLNESRDVLSEWLDHNHGKDVRDHSVFDDLAKTYEKEFLADMARLNVLPVDVLTRVSEY 400
Query: 657 IPEIV 661
+PE++
Sbjct: 401 VPEVI 405
>UNIPROTKB|O76618 [details] [associations]
symbol:cars-1 "Protein CARS-1, isoform a" species:6239
"Caenorhabditis elegans" [GO:0006423 "cysteinyl-tRNA
aminoacylation" evidence=IBA] [GO:0005829 "cytosol" evidence=IBA]
[GO:0004817 "cysteine-tRNA ligase activity" evidence=IBA]
HAMAP:MF_00041 InterPro:IPR009080 InterPro:IPR015803 Pfam:PF01406
GO:GO:0005829 GO:GO:0005524 GO:GO:0009792 GO:GO:0040007
GO:GO:0040010 GO:GO:0006915 GO:GO:0002119 GO:GO:0018996
GO:GO:0000003 Gene3D:3.40.50.620 InterPro:IPR014729 SUPFAM:SSF47323
eggNOG:COG0215 InterPro:IPR024909 PANTHER:PTHR10890 PRINTS:PR00983
GO:GO:0004817 GO:GO:0006423 HSSP:P21888 HOGENOM:HOG000245252
KO:K01883 TIGRFAMs:TIGR00435 GeneTree:ENSGT00390000006347
OMA:KQWVNYF EMBL:FO081344 PIR:H87729 RefSeq:NP_491013.1
UniGene:Cel.6428 ProteinModelPortal:O76618 SMR:O76618 STRING:O76618
PaxDb:O76618 PRIDE:O76618 EnsemblMetazoa:Y23H5A.7a GeneID:171821
KEGG:cel:CELE_Y23H5A.7 UCSC:Y23H5A.7b CTD:171821 WormBase:Y23H5A.7a
InParanoid:O76618 NextBio:872849 ArrayExpress:O76618 Uniprot:O76618
Length = 909
Score = 334 (122.6 bits), Expect = 4.8e-44, Sum P(2) = 4.8e-44
Identities = 91/267 (34%), Positives = 143/267 (53%)
Query: 248 SQKQQSLKLVVIMKEFFLNVKDHIRNLKFPATTVSSFEKWTQADLELSTRFIQTKNNVHA 307
S +++L+ I EFFL VKD +R P + ++K+ +L+L F + K+ VH
Sbjct: 609 STMERALQFEKITNEFFLLVKDFLRRHYKPDRS-EGYQKFQGKELKLMEEFGKLKSEVHE 667
Query: 308 ALCDNMDTRSALDSIRDCISQVNIYL-----RG-TPNQLLLRDIGAYVTKILTVFGCIGD 361
ALCD++DTRS ++ R+ IS N Y+ G PN LLLR+I AY+T +L +FG I
Sbjct: 668 ALCDSVDTRSVIEKFRELISLGNAYIVEKEKEGHVPNCLLLRNIAAYITNLLKIFGAIPQ 727
Query: 362 V-KNIGF----PLGGTGVEST-NLEELVLPYLTILSEFRDNIRTEARLIKSTEILNQCDR 415
+ IGF G G ++ N E +V+PYL L++FR+ +R A+ K IL +CD
Sbjct: 728 SNQEIGFVSEDECNGEGASTSFNKEAVVMPYLDALAQFREKVRLIAKEHKVNGILEECDT 787
Query: 416 LRDEVLPNVGVRLEDIEGKSYITFDILRRILSEYFNYNITYAMNITDIDDKIIKRARQNY 475
LRD+ L +GVRLED G++ + +L E + + DK ++AR+
Sbjct: 788 LRDKTLTELGVRLEDRNGQTVVKLVDRATLLREQEQKDTEKKRKDKEKADKE-QKAREKA 846
Query: 476 LFEKHVQENEIQTSKILKDIGEVMGAF 502
+K +I+ ++ K GE +G +
Sbjct: 847 --DKEAAAKKIKPEELFKQ-GEHVGKY 870
Score = 325 (119.5 bits), Expect = 3.1e-53, Sum P(2) = 3.1e-53
Identities = 55/77 (71%), Positives = 61/77 (79%)
Query: 780 LSSQEASEKRSPNDFALWKKSKAGEPWWSSPWGEGRPGWHIECSVMASAVLGPQLDIHTG 839
+S KRSPNDFALWK SK GEP+W S WG GRPGWHIECSVM+SA+ G +LDIH G
Sbjct: 468 MSDDRLKSKRSPNDFALWKSSKDGEPFWPSEWGNGRPGWHIECSVMSSAICGSKLDIHAG 527
Query: 840 GVDLKFPHHDNELAQAE 856
G DLKFPHHDNE+AQ E
Sbjct: 528 GFDLKFPHHDNEIAQVE 544
Score = 312 (114.9 bits), Expect = 3.1e-53, Sum P(2) = 3.1e-53
Identities = 64/178 (35%), Positives = 103/178 (57%)
Query: 434 KSYITFDILRRILSEYFNYNITYAMNITDIDDKIIKRARQNYLFEKHVQENEIQ-TSKIL 492
+SY++ DILRR+ +YF Y++ + MNITD+DDKIIKRARQ++L + + E++ K+
Sbjct: 224 RSYLSLDILRRVFRDYFGYDVEFIMNITDVDDKIIKRARQSHLLKSYFNESQAPPVMKVC 283
Query: 493 KDIGEVMGAFESKMKLVTDPDKLTMMKNILSNVQEAKQDISAQPEGTINNIKNVTFQKLL 552
+D+ + F++K + DPDK M + ++ VQ+ + + + +LL
Sbjct: 284 EDVVAALEHFKTKFETEMDPDKKKMFEVMIKKVQQQSSALEEAMKAQDSIATEEAKGRLL 343
Query: 553 TAVRDPFSDWLDSLHGSSITDNSIFATLPKHWEAEFHKDMADLNKLLTAVRDPLSDWL 610
RD S+WLD HG + D+S+F L K +E EF DMA LN L V +S+++
Sbjct: 344 NESRDVLSEWLDHNHGKDVRDHSVFDDLAKTYEKEFLADMARLNVLPVDVLTRVSEYV 401
Score = 215 (80.7 bits), Expect = 4.8e-44, Sum P(2) = 4.8e-44
Identities = 40/64 (62%), Positives = 53/64 (82%)
Query: 118 VLPPTVLTRVSEYIPEIVASYIEKIIANGLAYES-NGSVYFNVNAFDSQPNHYYAKLVPE 176
VLP VLTRVSEY+PE++ +Y++KII+NG AY + +GSVYF+ AF+ P H+YAKLVPE
Sbjct: 388 VLPVDVLTRVSEYVPEVI-TYVKKIISNGYAYAAEDGSVYFDTKAFEQNPKHFYAKLVPE 446
Query: 177 AYGD 180
AYG+
Sbjct: 447 AYGE 450
Score = 189 (71.6 bits), Expect = 2.6e-40, Sum P(2) = 2.6e-40
Identities = 37/65 (56%), Positives = 46/65 (70%)
Query: 597 KLLTAVRDPLSDWLDSLHGSSITDNSIFATLPKHWEAEFHKDMADLNVLPPTVLTRVSEY 656
+LL RD LS+WLD HG + D+S+F L K +E EF DMA LNVLP VLTRVSEY
Sbjct: 341 RLLNESRDVLSEWLDHNHGKDVRDHSVFDDLAKTYEKEFLADMARLNVLPVDVLTRVSEY 400
Query: 657 IPEIV 661
+PE++
Sbjct: 401 VPEVI 405
>UNIPROTKB|Q7S618 [details] [associations]
symbol:NCU05642 "Putative uncharacterized protein"
species:367110 "Neurospora crassa OR74A" [GO:0004817 "cysteine-tRNA
ligase activity" evidence=ISS] [GO:0005829 "cytosol" evidence=ISS]
[GO:0006423 "cysteinyl-tRNA aminoacylation" evidence=ISS]
HAMAP:MF_00041 InterPro:IPR009080 InterPro:IPR015803 Pfam:PF01406
GO:GO:0005829 GO:GO:0005524 Gene3D:3.40.50.620 InterPro:IPR014729
SUPFAM:SSF47323 eggNOG:COG0215 InterPro:IPR024909 PANTHER:PTHR10890
PRINTS:PR00983 GO:GO:0004817 GO:GO:0006423 EMBL:AABX02000022
HOGENOM:HOG000245252 KO:K01883 TIGRFAMs:TIGR00435 OrthoDB:EOG45TGWF
OMA:FRTNEYS RefSeq:XP_960203.2 UniGene:Ncr.15637
ProteinModelPortal:Q7S618 STRING:Q7S618
EnsemblFungi:EFNCRT00000005595 GeneID:3876361 KEGG:ncr:NCU05642
Uniprot:Q7S618
Length = 806
Score = 327 (120.2 bits), Expect = 2.7e-46, Sum P(3) = 2.7e-46
Identities = 60/85 (70%), Positives = 67/85 (78%)
Query: 778 GDLSSQEASEKRSPNDFALWKKSKAGEPWWSSPWGEGRPGWHIECSVMASAVLGPQLDIH 837
G LS+ +KRS DFALWKKSK GEP+W SPWG GRPGWHIECSVMAS LG Q+DIH
Sbjct: 298 GSLSTALGGKKRS-GDFALWKKSKPGEPYWPSPWGAGRPGWHIECSVMASDKLGEQMDIH 356
Query: 838 TGGVDLKFPHHDNELAQAEGLPTHD 862
+GG+DL FPHHDNELAQ+E HD
Sbjct: 357 SGGIDLAFPHHDNELAQSEAY-FHD 380
Score = 197 (74.4 bits), Expect = 1.4e-41, Sum P(2) = 1.4e-41
Identities = 39/71 (54%), Positives = 54/71 (76%)
Query: 118 VLPPTVLTRVSEYIPEIVASYIEKIIANGLAYESNGSVYFNVNAFDSQPNHYYAKLVPEA 177
VLPP V+TRV+EY+P+IVA ++E+II G AYE++GSVYF++ AF+ N Y A+L PE+
Sbjct: 229 VLPPDVITRVTEYVPQIVA-FVEQIIQKGFAYEADGSVYFDIGAFEKAGNTY-ARLRPES 286
Query: 178 YGDTKTLQEGE 188
DT +EGE
Sbjct: 287 KNDTALQEEGE 297
Score = 146 (56.5 bits), Expect = 2.7e-46, Sum P(3) = 2.7e-46
Identities = 33/65 (50%), Positives = 42/65 (64%)
Query: 599 LTAVRDPLSDWLDSLHGSSI--TDNSIFATLPKHWEAEFHKDMADLNVLPPTVLTRVSEY 656
L A D L +LDSL+ +I +D +IF L K E F DM LNVLPP V+TRV+EY
Sbjct: 182 LDAAEDVLLPYLDSLYKETIDTSDQTIFTDLTKTMEKAFADDMEALNVLPPDVITRVTEY 241
Query: 657 IPEIV 661
+P+IV
Sbjct: 242 VPQIV 246
Score = 140 (54.3 bits), Expect = 2.7e-46, Sum P(3) = 2.7e-46
Identities = 33/97 (34%), Positives = 53/97 (54%)
Query: 434 KSYITFDILRRILSEYFNYNITYAMNITDIDDKIIKRARQNYLFEKHVQENEIQTSKILK 493
++Y++ DI+RRIL YF+Y + + MN TD+DDKII +AR+ L E +E +I
Sbjct: 45 RNYVSTDIIRRILMHYFDYKVNFVMNYTDVDDKIIIKARRKRLLELE-KEKPYTPEQIHN 103
Query: 494 DIGEVMGAFESKMKLVTDPDKLTMMKNILSNVQEAKQ 530
I + A+ + L+ D + + N +E KQ
Sbjct: 104 LIFKAFQAYTKSLPLLAPQDAGPLDEK---NYEERKQ 137
Score = 112 (44.5 bits), Expect = 5.7e-22, Sum P(3) = 5.7e-22
Identities = 36/162 (22%), Positives = 70/162 (43%)
Query: 243 VRVHLSQKQQSLKLVVIMKEFFLNVKDHIRNLKFPATTVSSFEKWTQADLE-LSTRFIQT 301
V + ++Q+ + FF N+K + + ++ + A L F Q
Sbjct: 441 VEISPDMRKQADNWETTLDNFFTNIKARLSEVD-ASSGIKDLSLSEDAGARGLLEDFEQA 499
Query: 302 KNNVHAALCDNMDTRSALDSIRDCISQVNIYLRGT-PNQLLLRDIGAYVTKILTVFGCIG 360
K ++ AAL ++ DT +A+ + + NIY+ + PN L + +VTKI+ VFG
Sbjct: 500 KKDLDAALRNSFDTPTAMQVLLKLVRNANIYMNSSNPNVQALESVARWVTKIVGVFGLDA 559
Query: 361 DVKNIGFPLGGTGVESTNLEEL-----VLPYLTILSEFRDNI 397
+ LG + ++N + V PY + ++ + +
Sbjct: 560 SAQPPYDGLGWSSATASNKANVDPQTAVKPYAAVFNQVKQEV 601
Score = 80 (33.2 bits), Expect = 5.7e-22, Sum P(3) = 5.7e-22
Identities = 23/68 (33%), Positives = 36/68 (52%)
Query: 380 EELVLPYLTILSEFRDNIRTEARL-------IKSTEILNQCDRLRDEVLPNVGVRLED-I 431
E+L LP++ S RD +R +K IL DR+RD L ++GV+L+D +
Sbjct: 637 EKLALPFIRATSRLRDELRATISSGVALDPKVKQA-ILALSDRIRDYDLTDLGVQLDDRV 695
Query: 432 EGKSYITF 439
+G S + F
Sbjct: 696 DGPSLVKF 703
Score = 70 (29.7 bits), Expect = 2.2e-38, Sum P(3) = 2.2e-38
Identities = 20/49 (40%), Positives = 25/49 (51%)
Query: 552 LTAVRDPFSDWLDSLHGSSI--TDNSIFATLPKHWEAEFHKDMADLNKL 598
L A D +LDSL+ +I +D +IF L K E F DM LN L
Sbjct: 182 LDAAEDVLLPYLDSLYKETIDTSDQTIFTDLTKTMEKAFADDMEALNVL 230
Score = 41 (19.5 bits), Expect = 3.1e-25, Sum P(2) = 3.1e-25
Identities = 25/104 (24%), Positives = 43/104 (41%)
Query: 230 LFPYTEFKDKYGKVRVHLSQKQQSLKLVVIMKEFFLNVKDHIRNLKFPATTVSSFEKWTQ 289
L P T+ D KV++HL+ + + +K + D ++ P + S K T
Sbjct: 149 LVPETKPGDAEAKVKMHLNNMDAAAEA---LKNG--SGLDAAEDVLLPY--LDSLYKET- 200
Query: 290 ADLELSTRFIQTKNNVHAALCDNMDTRSALDSIRDCISQVNIYL 333
D T F + A D+M+ + L D I++V Y+
Sbjct: 201 IDTSDQTIFTDLTKTMEKAFADDMEALNVLPP--DVITRVTEYV 242
Score = 38 (18.4 bits), Expect = 1.1e-10, Sum P(2) = 1.1e-10
Identities = 10/39 (25%), Positives = 20/39 (51%)
Query: 519 KNILSNVQEAKQDISAQPEGTINNIKNVTFQKLLTAVRD 557
+ +L + ++AK+D+ A + + Q LL VR+
Sbjct: 490 RGLLEDFEQAKKDLDAALRNSFDT--PTAMQVLLKLVRN 526
>UNIPROTKB|Q752D6 [details] [associations]
symbol:AGOS_AFR640W "AFR640Wp" species:284811 "Ashbya
gossypii ATCC 10895" [GO:0004817 "cysteine-tRNA ligase activity"
evidence=ISS] [GO:0005829 "cytosol" evidence=ISS] [GO:0006423
"cysteinyl-tRNA aminoacylation" evidence=ISS] HAMAP:MF_00041
InterPro:IPR009080 InterPro:IPR015803 Pfam:PF01406 GO:GO:0005829
GO:GO:0005524 GO:GO:0005840 Gene3D:3.40.50.620 InterPro:IPR014729
SUPFAM:SSF47323 EMBL:AE016819 GenomeReviews:AE016819_GR
InterPro:IPR024909 PANTHER:PTHR10890 PRINTS:PR00983 GO:GO:0004817
GO:GO:0006423 HOGENOM:HOG000245252 KO:K01883 TIGRFAMs:TIGR00435
OrthoDB:EOG45TGWF RefSeq:NP_986187.2 ProteinModelPortal:Q752D6
STRING:Q752D6 EnsemblFungi:AAS54011 GeneID:4622475
KEGG:ago:AGOS_AFR640W Uniprot:Q752D6
Length = 750
Score = 331 (121.6 bits), Expect = 2.8e-46, Sum P(2) = 2.8e-46
Identities = 58/79 (73%), Positives = 67/79 (84%)
Query: 778 GDLSSQEASEKRSPNDFALWKKSKAGEPWWSSPWGEGRPGWHIECSVMASAVLGPQLDIH 837
G+ + +EK++PNDFALWK SKAGEP W SPWG GRPGWHIECSVMAS VLG ++DIH
Sbjct: 315 GEGALATGTEKQNPNDFALWKASKAGEPEWPSPWGLGRPGWHIECSVMASDVLGERVDIH 374
Query: 838 TGGVDLKFPHHDNELAQAE 856
+GG+DL FPHHDNELAQAE
Sbjct: 375 SGGIDLAFPHHDNELAQAE 393
Score = 236 (88.1 bits), Expect = 2.8e-46, Sum P(2) = 2.8e-46
Identities = 58/190 (30%), Positives = 97/190 (51%)
Query: 434 KSYITFDILRRILSEYFNYNITYAMNITDIDDKIIKRARQNYLFEKHVQENEIQTSKILK 493
++Y++ DI RR++ +YF Y++ + N+TDIDDKII RARQ +L+ ++V + +L
Sbjct: 77 RNYVSIDINRRLIEDYFGYHVEFVQNVTDIDDKIILRARQEHLYAEYVAAHPSVDQLVLA 136
Query: 494 DIGEVMGAFESKMKLVTDPDKLTMM-------KNILSNVQEAKQDISAQPEGT---INNI 543
D E + + K +PD T+ K L+ +EA + ++ +
Sbjct: 137 DATEAVVQYFRKH---LNPDLTTISAYEQWYAKLDLAREREANAKFAMHTAAVGRALDAL 193
Query: 544 KNVTFQKLLTAVRDPFSDWLDSLHGSSITDNSIFATLPKHWEAEFHKDMADLNKLLTAVR 603
+N T LTAV+D LD G+S+ D +F L HWE F+ DM L +V
Sbjct: 194 ENPTVPGFLTAVKDVLVPLLDGRSGASVRDPDVFRALAAHWENSFNADMERLGVRPPSVT 253
Query: 604 DPLSDWLDSL 613
+S+++D +
Sbjct: 254 TRVSEYVDEI 263
Score = 171 (65.3 bits), Expect = 1.8e-19, Sum P(2) = 1.8e-19
Identities = 43/143 (30%), Positives = 65/143 (45%)
Query: 291 DLELSTRFIQTKNNVHAALCDNMDTRSALDSIRDCISQVNIYLRGTPNQLLLRDIGA--- 347
+ EL VH LCDN+ T S L + + + + N Y+ + + + A
Sbjct: 494 EAELRAHLADAAARVHENLCDNLSTHSVLRCLGELVGRANAYIGAAGPEARVESVAAVAR 553
Query: 348 YVTKILTVFGCIGDVKNIGFPLGGTGVESTNLEELVLPYLTILSEFRDNIRTEARLIKST 407
+ T+IL G +G+ G E +LPY+ L+ FRD +R AR +
Sbjct: 554 FCTRILAAMGIPARADGLGWLEQQAGAAEAG-EAAILPYVRCLARFRDEVRKGARGGDTA 612
Query: 408 EILNQCDRLRDEVLPNVGVRLED 430
+L DR+RD LP +GV LED
Sbjct: 613 RLLAITDRVRDVDLPALGVLLED 635
Score = 161 (61.7 bits), Expect = 7.6e-39, Sum P(3) = 7.6e-39
Identities = 33/63 (52%), Positives = 40/63 (63%)
Query: 599 LTAVRDPLSDWLDSLHGSSITDNSIFATLPKHWEAEFHKDMADLNVLPPTVLTRVSEYIP 658
LTAV+D L LD G+S+ D +F L HWE F+ DM L V PP+V TRVSEY+
Sbjct: 202 LTAVKDVLVPLLDGRSGASVRDPDVFRALAAHWENSFNADMERLGVRPPSVTTRVSEYVD 261
Query: 659 EIV 661
EIV
Sbjct: 262 EIV 264
Score = 149 (57.5 bits), Expect = 3.8e-37, Sum P(2) = 3.8e-37
Identities = 35/72 (48%), Positives = 46/72 (63%)
Query: 118 VLPPTVLTRVSEYIPEIVASYIEKIIANGLAYE-SNGSVYFNVNAFDSQPNHYYAKLVPE 176
V PP+V TRVSEY+ EIV +IE+I+ANG AY S+GSVYF+ F++ H Y K P
Sbjct: 247 VRPPSVTTRVSEYVDEIV-KFIERIVANGYAYATSDGSVYFDTVQFEAG-GHAYPKCQPW 304
Query: 177 AYGDTKTLQEGE 188
G + +GE
Sbjct: 305 NRGVADLIADGE 316
Score = 47 (21.6 bits), Expect = 7.6e-39, Sum P(3) = 7.6e-39
Identities = 13/38 (34%), Positives = 22/38 (57%)
Query: 272 RNLKFPATTVSSFEKWTQADLELST-RFIQTKNNVHAA 308
++L TT+S++E+W A L+L+ R K +H A
Sbjct: 148 KHLNPDLTTISAYEQW-YAKLDLAREREANAKFAMHTA 184
>ASPGD|ASPL0000073957 [details] [associations]
symbol:sgdC species:162425 "Emericella nidulans"
[GO:0009847 "spore germination" evidence=IMP] [GO:0005829 "cytosol"
evidence=IEA] [GO:0006423 "cysteinyl-tRNA aminoacylation"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0004817
"cysteine-tRNA ligase activity" evidence=IEA] HAMAP:MF_00041
InterPro:IPR009080 InterPro:IPR015803 Pfam:PF01406 GO:GO:0005524
GO:GO:0005737 EMBL:BN001303 Gene3D:3.40.50.620 InterPro:IPR014729
SUPFAM:SSF47323 InterPro:IPR024909 PANTHER:PTHR10890 PRINTS:PR00983
GO:GO:0004817 GO:GO:0006423 TIGRFAMs:TIGR00435
EnsemblFungi:CADANIAT00006262 OMA:FRTNEYS Uniprot:C8V9N8
Length = 833
Score = 316 (116.3 bits), Expect = 3.4e-46, Sum P(3) = 3.4e-46
Identities = 56/79 (70%), Positives = 65/79 (82%)
Query: 778 GDLSSQEASEKRSPNDFALWKKSKAGEPWWSSPWGEGRPGWHIECSVMASAVLGPQLDIH 837
G L+++ +EKRS +DFALWK SK GEP WSS WG GRPGWHIECS MASA LG +DIH
Sbjct: 364 GSLANK-TTEKRSKSDFALWKSSKPGEPSWSSSWGRGRPGWHIECSAMASARLGKHMDIH 422
Query: 838 TGGVDLKFPHHDNELAQAE 856
+GG+DL FPHHDNELAQ+E
Sbjct: 423 SGGIDLAFPHHDNELAQSE 441
Score = 163 (62.4 bits), Expect = 3.4e-46, Sum P(3) = 3.4e-46
Identities = 31/80 (38%), Positives = 50/80 (62%)
Query: 434 KSYITFDILRRILSEYFNYNITYAMNITDIDDKIIKRARQNYLFEKHVQENEIQTSKILK 493
++Y++ DI+RRI+ +YF +N+ + MNITD+DDKII RARQ +LF K V + ++L
Sbjct: 99 RNYVSTDIIRRIMRDYFKFNVHFVMNITDVDDKIILRARQQHLFTKFVTAHPTVDEEVLD 158
Query: 494 DIGEVMGAFESKMKLVTDPD 513
+ A+ K + P+
Sbjct: 159 VAKKAYAAYLKKNLPLLSPE 178
Score = 153 (58.9 bits), Expect = 1.1e-35, Sum P(2) = 1.1e-35
Identities = 37/75 (49%), Positives = 48/75 (64%)
Query: 115 DETVLPPTVLTRVSEYIPEIVASYIEKIIANGLAYES-NGSVYFNVNAFDSQPNHYYAKL 173
D VL P LTRV+EY EI A ++EKI+ N Y S +GSVYF++NAF++ YA+L
Sbjct: 291 DLNVLRPDELTRVTEYGQEI-ADFVEKIVENKFGYVSADGSVYFDINAFEAA-GFPYARL 348
Query: 174 VPEAYGDTKTLQEGE 188
P + D K L EGE
Sbjct: 349 EPWSRSDNKLLAEGE 363
Score = 135 (52.6 bits), Expect = 3.4e-46, Sum P(3) = 3.4e-46
Identities = 33/66 (50%), Positives = 41/66 (62%)
Query: 597 KLLTAVRDPLSDWLDSLHGSSIT--DNSIFATLPKHWEAEFHKDMADLNVLPPTVLTRVS 654
+ T +D L +LD+L GS I D+SIF L + +E F KDM DLNVL P LTRV+
Sbjct: 245 RFYTDAQDLLLPYLDALEGSLIDADDHSIFTKLTRKYEERFMKDMDDLNVLRPDELTRVT 304
Query: 655 EYIPEI 660
EY EI
Sbjct: 305 EYGQEI 310
Score = 126 (49.4 bits), Expect = 5.2e-15, Sum P(2) = 5.2e-15
Identities = 40/143 (27%), Positives = 67/143 (46%)
Query: 260 MKEFFLNVKDHIRNLKFPATTVSSFEKWTQADLELSTRFIQTKNNVHAALCDNMDTRSAL 319
+ FF+ VKD + PA++ D L+ K+ VH LCD+ +T +
Sbjct: 522 LNNFFIRVKDPAAR-QGPASST---------DTTLAEALEAAKSAVHEQLCDSFNTPGMM 571
Query: 320 DSIRDCISQVNIYLRGTPNQLLLRDIGAYVTKILTVFGCIGDVKNIGFPLGGTGVESTNL 379
+SI + I++ NI + T N + + +VT ++ V G G +G +G++ +
Sbjct: 572 NSISELITKYNIADKSTLNPKDVEAVARWVTYMVNVLGLNGQTPADSREIGWSGID---V 628
Query: 380 EELVLPYLTILSEFRDNIRTEAR 402
E P+L LS RD +R AR
Sbjct: 629 PEEAKPFLYPLSAMRDALRQSAR 651
Score = 88 (36.0 bits), Expect = 4.5e-11, Sum P(2) = 4.5e-11
Identities = 24/67 (35%), Positives = 35/67 (52%)
Query: 381 ELVLPYLTILSEFRDNIRT-EARLIKSTEILNQCDRLRDEVLPNVGVRLEDIEGKSYITF 439
E PY T++S FR + + + E+L CDRLRD L ++GV LED E I
Sbjct: 675 EKTKPYATVVSNFRTKVSSLQDSGDLGKEVLALCDRLRDVDLFDLGVYLEDRENLPAIVR 734
Query: 440 DILRRIL 446
+ R ++
Sbjct: 735 PVSRDLI 741
Score = 39 (18.8 bits), Expect = 2.7e-33, Sum P(3) = 2.7e-33
Identities = 31/141 (21%), Positives = 53/141 (37%)
Query: 263 FFLNVKDHIRNLKFPATTVSSFEKWTQADLELSTRFIQTKNNVHAA-LCDNMDTRSALDS 321
F +N+ D + A F K+ A + + +AA L N+ S
Sbjct: 121 FVMNITDVDDKIILRARQQHLFTKFVTAHPTVDEEVLDVAKKAYAAYLKKNLPLLSPELP 180
Query: 322 IRDCISQVN----IYLRGTP---NQLLLRD---IGAYVTKILTVFGCIGDVKNIGFPLGG 371
D +V + L G P N+ D I ++ + + I + + + G
Sbjct: 181 PSDYSKEVEKAYAVILNGGPLPGNEKAGDDEAKIKMHIKTVSSAANVIVEAEKLDKSAQG 240
Query: 372 TGVES--TNLEELVLPYLTIL 390
T E T+ ++L+LPYL L
Sbjct: 241 TFPERFYTDAQDLLLPYLDAL 261
>SGD|S000005191 [details] [associations]
symbol:YNL247W "Cysteinyl-tRNA synthetase" species:4932
"Saccharomyces cerevisiae" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005840 "ribosome" evidence=IDA] [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0006412 "translation" evidence=IEA]
[GO:0016874 "ligase activity" evidence=IEA] [GO:0046872 "metal ion
binding" evidence=IEA] [GO:0004817 "cysteine-tRNA ligase activity"
evidence=IEA;IDA] [GO:0006423 "cysteinyl-tRNA aminoacylation"
evidence=IEA;IDA] [GO:0005737 "cytoplasm" evidence=IEA;IDA]
[GO:0005829 "cytosol" evidence=IBA] [GO:0004812 "aminoacyl-tRNA
ligase activity" evidence=IEA] [GO:0006418 "tRNA aminoacylation for
protein translation" evidence=IEA] InterPro:IPR009080
InterPro:IPR015803 PROSITE:PS00178 SGD:S000005191 Pfam:PF01406
GO:GO:0005829 GO:GO:0005524 GO:GO:0046872 EMBL:BK006947
Gene3D:3.40.50.620 InterPro:IPR014729 EMBL:X96722 SUPFAM:SSF47323
eggNOG:COG0215 InterPro:IPR024909 PANTHER:PTHR10890 PRINTS:PR00983
GO:GO:0004817 GO:GO:0006423 HOGENOM:HOG000245252 KO:K01883
TIGRFAMs:TIGR00435 GeneTree:ENSGT00390000006347 OrthoDB:EOG45TGWF
EMBL:Z71523 PIR:S63220 RefSeq:NP_014152.1 ProteinModelPortal:P53852
SMR:P53852 IntAct:P53852 MINT:MINT-2491982 STRING:P53852
PaxDb:P53852 PeptideAtlas:P53852 EnsemblFungi:YNL247W GeneID:855474
KEGG:sce:YNL247W CYGD:YNL247w OMA:YLTFDIL NextBio:979427
Genevestigator:P53852 GermOnline:YNL247W Uniprot:P53852
Length = 767
Score = 328 (120.5 bits), Expect = 1.4e-45, Sum P(2) = 1.4e-45
Identities = 57/79 (72%), Positives = 66/79 (83%)
Query: 778 GDLSSQEASEKRSPNDFALWKKSKAGEPWWSSPWGEGRPGWHIECSVMASAVLGPQLDIH 837
G LS+ + K+S NDFALWK SKAGEP W SPWG+GRPGWHIECSVMAS +LG +DIH
Sbjct: 325 GSLSNFADNGKKSNNDFALWKASKAGEPEWESPWGKGRPGWHIECSVMASDILGSNIDIH 384
Query: 838 TGGVDLKFPHHDNELAQAE 856
+GG+DL FPHHDNELAQ+E
Sbjct: 385 SGGIDLAFPHHDNELAQSE 403
Score = 233 (87.1 bits), Expect = 1.4e-45, Sum P(2) = 1.4e-45
Identities = 62/194 (31%), Positives = 104/194 (53%)
Query: 434 KSYITFDILRRILSEYFNYNITYAMNITDIDDKIIKRARQNYLFEKHVQENEIQTSKILK 493
++Y++ DI RRI+ +YF Y++ + N+TDIDDKII RARQNYLF+ V+EN+ + + +
Sbjct: 77 RNYVSIDINRRIIQDYFGYDVQFVQNVTDIDDKIILRARQNYLFDNFVKENDTKFNATVV 136
Query: 494 D-IGEVMGAFESKMKLVTDPDKLTM--MKNILSNV--QEAKQDISAQP---EGTINNIKN 545
D + + + +K + + T+ + LSN + K + P N I++
Sbjct: 137 DKVKTALFQYINKNFTIQGSEIKTIEEFETWLSNADTETLKLENPKFPMHVTAVQNAIES 196
Query: 546 VTFQKLLTA------VRDPFSDWLDSLHGSSITDNSIFATLPKHWEAEFHKDMADLNKLL 599
+T + A V+D LD GS+I++ IF LP +WE +F+ DM LN L
Sbjct: 197 ITKGDSMDAEVAFEKVKDVTVPLLDKELGSTISNPEIFRQLPAYWEQKFNDDMLSLNVLP 256
Query: 600 TAVRDPLSDWLDSL 613
V +S+++ +
Sbjct: 257 PTVTTRVSEYVPEI 270
Score = 226 (84.6 bits), Expect = 3.7e-30, Sum P(2) = 3.7e-30
Identities = 71/270 (26%), Positives = 138/270 (51%)
Query: 271 IRNLKFPATTVSSF-EKWTQADLELSTRFIQTKNNVHAALCDNMDTRSALDSIRDCISQV 329
IR LK A + +K++ + EL F+++++ VH+A CDN+ T AL ++ + +++
Sbjct: 487 IRALKNDAASAGHISKKFSPLEKELLADFVESESKVHSAFCDNLSTPVALKTLSELVTKS 546
Query: 330 NIYLRGTPNQLLLRDIGA---YVTKILTVFGCIGDVKNIGFPL--GGTGVESTNLEELVL 384
N Y+ L + + A Y+TKIL + G N+G+ G +LE+ V+
Sbjct: 547 NTYITTAGAALKIEPLIAICSYITKILRIIGFPSRPDNLGWAAQAGSNDGSLGSLEDTVM 606
Query: 385 PYLTILSEFRDNIRTEA-RLIKSTEILNQCDRLRDEVLPNVGVRLEDIEGKS----YITF 439
PY+ LS FRD++R+ A + + E L D++R+E L N+ V L+D G+S ++T
Sbjct: 607 PYVKCLSTFRDDVRSLAIKKAEPKEFLQLTDKIRNEDLLNLNVALDDRNGQSALIKFLTN 666
Query: 440 DILRRI--LSEYFNYNITYAMNITDIDDKIIKRARQNYLFEKHVQENEIQTSKILKDIGE 497
D I L+E + N A ++ + ++ ++N + Q+ +I+ + KD+
Sbjct: 667 DEKLEIVKLNEEKHAN-ELAKKQKKLEQQKLREQKEN----ERKQKAQIKPQDMFKDV-T 720
Query: 498 VMGAFESKMKLVTDPDKLTMMKNILSNVQE 527
+ A++ + D D + K++ +++
Sbjct: 721 LYSAWDEQGLPTKDKDGNDITKSMTKKLKK 750
Score = 194 (73.4 bits), Expect = 1.7e-41, Sum P(2) = 1.7e-41
Identities = 40/72 (55%), Positives = 49/72 (68%)
Query: 118 VLPPTVLTRVSEYIPEIVASYIEKIIANGLAYE-SNGSVYFNVNAFDSQPNHYYAKLVPE 176
VLPPTV TRVSEY+PEI+ +++KII NG AY S+GSVYF+ FD PNH YAK P
Sbjct: 254 VLPPTVTTRVSEYVPEII-DFVQKIIDNGYAYATSDGSVYFDTLKFDKSPNHDYAKCQPW 312
Query: 177 AYGDTKTLQEGE 188
G + +GE
Sbjct: 313 NKGQLDLINDGE 324
Score = 178 (67.7 bits), Expect = 8.4e-40, Sum P(2) = 8.4e-40
Identities = 46/123 (37%), Positives = 62/123 (50%)
Query: 544 KNVTFQKLLTAVRDPFSDWLDSLHGSSIT-DNSIF---ATLPKHWEAEFHK-DMADLNKL 598
KN T Q + F WL + ++ +N F T ++ K D D
Sbjct: 149 KNFTIQGSEIKTIEEFETWLSNADTETLKLENPKFPMHVTAVQNAIESITKGDSMDAEVA 208
Query: 599 LTAVRDPLSDWLDSLHGSSITDNSIFATLPKHWEAEFHKDMADLNVLPPTVLTRVSEYIP 658
V+D LD GS+I++ IF LP +WE +F+ DM LNVLPPTV TRVSEY+P
Sbjct: 209 FEKVKDVTVPLLDKELGSTISNPEIFRQLPAYWEQKFNDDMLSLNVLPPTVTTRVSEYVP 268
Query: 659 EIV 661
EI+
Sbjct: 269 EII 271
>CGD|CAL0006275 [details] [associations]
symbol:orf19.4931 species:5476 "Candida albicans" [GO:0005840
"ribosome" evidence=IEA] [GO:0005829 "cytosol" evidence=IEA]
[GO:0006423 "cysteinyl-tRNA aminoacylation" evidence=IEA]
[GO:0004817 "cysteine-tRNA ligase activity" evidence=IEA]
HAMAP:MF_00041 InterPro:IPR009080 InterPro:IPR015803 CGD:CAL0006275
Pfam:PF01406 GO:GO:0005524 GO:GO:0005737 EMBL:AACQ01000010
EMBL:AACQ01000009 Gene3D:3.40.50.620 InterPro:IPR014729
SUPFAM:SSF47323 eggNOG:COG0215 InterPro:IPR024909 PANTHER:PTHR10890
PRINTS:PR00983 GO:GO:0004817 GO:GO:0006423 KO:K01883
TIGRFAMs:TIGR00435 RefSeq:XP_722142.1 RefSeq:XP_722256.1
ProteinModelPortal:Q5AL46 STRING:Q5AL46 GeneID:3636105
GeneID:3636122 KEGG:cal:CaO19.12397 KEGG:cal:CaO19.4931
Uniprot:Q5AL46
Length = 781
Score = 301 (111.0 bits), Expect = 7.2e-45, Sum P(3) = 7.2e-45
Identities = 52/79 (65%), Positives = 63/79 (79%)
Query: 778 GDLSSQEASEKRSPNDFALWKKSKAGEPWWSSPWGEGRPGWHIECSVMASAVLGPQLDIH 837
G+ S ++ KR+ +DFALWK SK GEP W S WG+GRPGWHIECSVMAS + G +DIH
Sbjct: 330 GEGSLSVSNTKRNASDFALWKASKPGEPAWDSKWGKGRPGWHIECSVMASDITGENMDIH 389
Query: 838 TGGVDLKFPHHDNELAQAE 856
+GG+DL FPHHDNELAQ+E
Sbjct: 390 SGGIDLCFPHHDNELAQSE 408
Score = 258 (95.9 bits), Expect = 7.2e-45, Sum P(3) = 7.2e-45
Identities = 63/193 (32%), Positives = 103/193 (53%)
Query: 434 KSYITFDILRRILSEYFNYNITYAMNITDIDDKIIKRARQNYLFEKHVQENEIQTSKILK 493
++Y++ DI RRIL +YF YNI + N+TDIDDKII ARQ YLFE+ + +N + + LK
Sbjct: 86 RNYVSTDICRRILQDYFGYNIKFVQNVTDIDDKIIIAARQQYLFEEKLVKNYKEINDELK 145
Query: 494 DIG-EVMGAFESKMKLVTDPD---KLTMMKNILSNVQEAKQDISAQP---------EGTI 540
E + + SK + D N + N+ E +D P +I
Sbjct: 146 TKAKEYLQFYVSKNLPEFEGDLAKDFITWSNDIKNLSEIVKDKPKFPMYVKAAKLAHESI 205
Query: 541 NNIKNVTFQKLLTAVRDPFSDWLDSLHGSSITDNSIFATLPKHWEAEFHKDMADLNKLLT 600
K+++ +K L +++D LD G+++TD +F LP +WE +++DMA LN L
Sbjct: 206 YETKDISLEKFLDSIKDVAMPHLDKEFGATVTDPQVFRKLPSYWEKRYNEDMARLNVLPP 265
Query: 601 AVRDPLSDWLDSL 613
+V +S+++ +
Sbjct: 266 SVTTRVSEYMPDI 278
Score = 183 (69.5 bits), Expect = 4.6e-37, Sum P(3) = 4.6e-37
Identities = 34/72 (47%), Positives = 51/72 (70%)
Query: 590 KDMADLNKLLTAVRDPLSDWLDSLHGSSITDNSIFATLPKHWEAEFHKDMADLNVLPPTV 649
KD++ L K L +++D LD G+++TD +F LP +WE +++DMA LNVLPP+V
Sbjct: 209 KDIS-LEKFLDSIKDVAMPHLDKEFGATVTDPQVFRKLPSYWEKRYNEDMARLNVLPPSV 267
Query: 650 LTRVSEYIPEIV 661
TRVSEY+P+I+
Sbjct: 268 TTRVSEYMPDII 279
Score = 170 (64.9 bits), Expect = 1.0e-35, Sum P(3) = 1.0e-35
Identities = 34/72 (47%), Positives = 51/72 (70%)
Query: 118 VLPPTVLTRVSEYIPEIVASYIEKIIANGLAYESN-GSVYFNVNAFDSQPNHYYAKLVPE 176
VLPP+V TRVSEY+P+I+ +++KI+ NG AY+++ GSVYF+ ++ H YAKL P
Sbjct: 262 VLPPSVTTRVSEYMPDII-EFVDKIVTNGYAYKTDDGSVYFDTVKYEHS-QHDYAKLQPW 319
Query: 177 AYGDTKTLQEGE 188
+ GD + +GE
Sbjct: 320 SKGDMSLINDGE 331
Score = 153 (58.9 bits), Expect = 2.2e-19, Sum P(3) = 2.2e-19
Identities = 52/189 (27%), Positives = 91/189 (48%)
Query: 262 EFFLNVKDHIRNLKFPATTVSSFE-KWTQADLELSTRFIQTKNNVHAALCDNMDTRSALD 320
+FF NV+ + K K T + +L Q ++ V AA DN+ + A+
Sbjct: 487 KFFTNVRALNSDYKHKTENGGYVSRKITDIEKQLFNDLEQAQDEVDAAFNDNLSSGQAIR 546
Query: 321 SIRDCISQVNIYLRGTPN-QLLLR-----DIGAYVTKILTVFGCIGDVKNIGF--PLGGT 372
++D IS+ N Y++ T Q LR + ++ KIL + G +G+ T
Sbjct: 547 VLQDLISKSNNYIQLTSTGQTELRIEVLIQVTNWIVKILEILGFEARSDRLGWIDESEQT 606
Query: 373 GVESTNLEELVLPYLTILSEFRDNIRTEA-RLIKSTEILNQCDRLRDEVLPNVGVRLEDI 431
V ++ E++ LPY+ L++FRD++R+ A + E L D +R ++ +GV L+D
Sbjct: 607 SVNGSSTEDVALPYVKALAQFRDSVRSLAINKAELNEFLKASDAIRSSLI-GLGVSLDDR 665
Query: 432 -EGKSYITF 439
+G S + F
Sbjct: 666 PDGTSLVKF 674
Score = 52 (23.4 bits), Expect = 4.2e-09, Sum P(3) = 4.2e-09
Identities = 30/128 (23%), Positives = 57/128 (44%)
Query: 392 EFRDNIRTEARLIKST--------EILNQCDRLRDEVLPNVGVRLEDIEGKSYITFDILR 443
+F+D++ +E + I+ST LN + + E V ++ DIE + + + +
Sbjct: 469 DFKDSLISEVKSIESTFSKFFTNVRALNSDYKHKTENGGYVSRKITDIEKQLFNDLEQAQ 528
Query: 444 RILSEYFNYNITYAMNITDIDDKIIKRARQNYLFEKHVQENE------IQTSKILKDIGE 497
+ FN N++ I + D I K NY+ + E IQ + + I E
Sbjct: 529 DEVDAAFNDNLSSGQAIRVLQDLISKS--NNYIQLTSTGQTELRIEVLIQVTNWIVKILE 586
Query: 498 VMGAFESK 505
++G FE++
Sbjct: 587 ILG-FEAR 593
Score = 42 (19.8 bits), Expect = 7.2e-45, Sum P(3) = 7.2e-45
Identities = 10/42 (23%), Positives = 16/42 (38%)
Query: 856 EGLPTHDQEXXXXXXXXXXXXXXXXXXXXXXYNEYIASVQKA 897
+GLPT D + Y EY+ +V++A
Sbjct: 739 QGLPTKDAKGEEISKSMKKKLTKQYQQQEKLYKEYLKTVEEA 780
Score = 40 (19.1 bits), Expect = 1.2e-44, Sum P(3) = 1.2e-44
Identities = 10/40 (25%), Positives = 14/40 (35%)
Query: 909 QGLPTHDQEXXXXXXXXXXXXXXXXXXXXXXYNEYIASVQ 948
QGLPT D + Y EY+ +V+
Sbjct: 739 QGLPTKDAKGEEISKSMKKKLTKQYQQQEKLYKEYLKTVE 778
>POMBASE|SPAC29E6.06c [details] [associations]
symbol:SPAC29E6.06c "cytoplasmic cysteine-tRNA ligase
Crs1 (predicted)" species:4896 "Schizosaccharomyces pombe"
[GO:0002181 "cytoplasmic translation" evidence=NAS] [GO:0004817
"cysteine-tRNA ligase activity" evidence=ISS] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005829 "cytosol" evidence=IDA]
[GO:0006423 "cysteinyl-tRNA aminoacylation" evidence=ISS]
[GO:0046872 "metal ion binding" evidence=IEA] InterPro:IPR009080
InterPro:IPR015803 PROSITE:PS00178 PomBase:SPAC29E6.06c
Pfam:PF01406 GO:GO:0005829 GO:GO:0005524 EMBL:CU329670
GO:GO:0046872 GO:GO:0002181 Gene3D:3.40.50.620 InterPro:IPR014729
SUPFAM:SSF47323 eggNOG:COG0215 InterPro:IPR024909 PANTHER:PTHR10890
PRINTS:PR00983 GO:GO:0004817 GO:GO:0006423 EMBL:Z66525
HOGENOM:HOG000245252 KO:K01883 TIGRFAMs:TIGR00435 PIR:T38507
RefSeq:NP_594564.1 ProteinModelPortal:Q09860 STRING:Q09860
PRIDE:Q09860 EnsemblFungi:SPAC29E6.06c.1 GeneID:2542721
KEGG:spo:SPAC29E6.06c OMA:KQWVNYF OrthoDB:EOG45TGWF
NextBio:20803767 Uniprot:Q09860
Length = 754
Score = 313 (115.2 bits), Expect = 1.5e-44, Sum P(2) = 1.5e-44
Identities = 54/79 (68%), Positives = 63/79 (79%)
Query: 778 GDLSSQEASEKRSPNDFALWKKSKAGEPWWSSPWGEGRPGWHIECSVMASAVLGPQLDIH 837
G+ S + K+ P DFALWK SK GEP W SPW +GRPGWHIECSVMASA+LG +DIH
Sbjct: 306 GEGSLAALTGKKRPGDFALWKASKPGEPSWDSPWSKGRPGWHIECSVMASALLGSNIDIH 365
Query: 838 TGGVDLKFPHHDNELAQAE 856
+GG+DL FPHHDNELAQ+E
Sbjct: 366 SGGIDLAFPHHDNELAQSE 384
Score = 239 (89.2 bits), Expect = 1.5e-44, Sum P(2) = 1.5e-44
Identities = 68/188 (36%), Positives = 99/188 (52%)
Query: 434 KSYITFDILRRILSEYFNYNITYAMNITDIDDKIIKRARQNYLFEKHVQENEIQTS--KI 491
++Y+T DILRRIL YF YNIT+ N+TDIDDKII RARQ YLFE++ ++ S +
Sbjct: 60 RNYVTTDILRRILQSYFGYNITFVQNVTDIDDKIILRARQQYLFEEYKKQQGTNKSHSEA 119
Query: 492 LKDIGEVMGAFESKMKLVTDPDKL-------------TMMKN---ILSNVQEAKQDISAQ 535
+ + E A+ +K L P + T+ N + +V K + A
Sbjct: 120 REKVTEAWFAY-AKKNLPEPPSSMSEWPQWLASHDIPTLAINNPKLPMHVDALKSALDAL 178
Query: 536 PEGTINNIKNVTFQKLLTAVRDPFSDWLDSLHGSSITDNSIFATLPKHWEAEFHKDMADL 595
+ I ++ V+D LD+ GS++TD +IF L +WE +F+KDMA+L
Sbjct: 179 QVSEASEI--ISLDGFWPKVQDVLVPLLDAELGSTVTDPAIFRKLAAYWEDDFNKDMANL 236
Query: 596 NKLL-TAV 602
N L TAV
Sbjct: 237 NVLPPTAV 244
Score = 207 (77.9 bits), Expect = 2.0e-26, Sum P(2) = 2.0e-26
Identities = 53/153 (34%), Positives = 81/153 (52%)
Query: 285 EKWTQADLELSTRFIQTKNNVHAALCDNMDTRSALDSIRDCISQVNIYLRGT---PNQLL 341
EK+ + ++EL +F QT+ N H ALCD+ +T + I + ++Q NIY+R P L
Sbjct: 487 EKFDKLEIELLEKFQQTQQNTHLALCDSFNTPLVMQHIDNLVTQANIYIREVGQQPCSRL 546
Query: 342 LRDIGAYVTKILTVFGCI--GDVKNIGFPLGGTGVESTNLEELVLPYLTILSEFRDNIRT 399
L I +++T +L +FG G +G+ G S N + +PY+ +S FRD +R
Sbjct: 547 LGQIASWITSMLQIFGLDENGHPNAVGWS-SSKGSSSENTD--AMPYIRAVSSFRDRVR- 602
Query: 400 EARLIK--STEILNQCDRLRDEVLPNVGVRLED 430
E + K S EIL CD RD + +GV D
Sbjct: 603 ELCIAKASSQEILKACDIFRDYDMAALGVSFND 635
Score = 185 (70.2 bits), Expect = 6.8e-39, Sum P(2) = 6.8e-39
Identities = 37/71 (52%), Positives = 51/71 (71%)
Query: 591 DMADLNKLLTAVRDPLSDWLDSLHGSSITDNSIFATLPKHWEAEFHKDMADLNVLPPTVL 650
++ L+ V+D L LD+ GS++TD +IF L +WE +F+KDMA+LNVLPPT +
Sbjct: 185 EIISLDGFWPKVQDVLVPLLDAELGSTVTDPAIFRKLAAYWEDDFNKDMANLNVLPPTAV 244
Query: 651 TRVSEYIPEIV 661
TRVSEY+PEIV
Sbjct: 245 TRVSEYVPEIV 255
Score = 178 (67.7 bits), Expect = 3.7e-38, Sum P(2) = 3.7e-38
Identities = 37/72 (51%), Positives = 52/72 (72%)
Query: 118 VLPPTVLTRVSEYIPEIVASYIEKIIANGLAYE-SNGSVYFNVNAFDSQPNHYYAKLVPE 176
VLPPT +TRVSEY+PEIV ++++II G AY ++GSVYF+ AF+ + H+YAKL P
Sbjct: 238 VLPPTAVTRVSEYVPEIV-DFVQRIIDRGYAYPVTDGSVYFDTEAFE-KGGHFYAKLEPW 295
Query: 177 AYGDTKTLQEGE 188
G+ + + EGE
Sbjct: 296 NKGNRELIAEGE 307
>UNIPROTKB|Q5ASD0 [details] [associations]
symbol:AN8800.2 "Putative uncharacterized protein"
species:227321 "Aspergillus nidulans FGSC A4" [GO:0004817
"cysteine-tRNA ligase activity" evidence=ISS] [GO:0005829 "cytosol"
evidence=ISS] [GO:0006423 "cysteinyl-tRNA aminoacylation"
evidence=ISS] HAMAP:MF_00041 InterPro:IPR009080 InterPro:IPR015803
Pfam:PF01406 GO:GO:0005829 GO:GO:0005524 EMBL:AACD01000161
Gene3D:3.40.50.620 InterPro:IPR014729 SUPFAM:SSF47323
eggNOG:COG0215 InterPro:IPR024909 PANTHER:PTHR10890 PRINTS:PR00983
GO:GO:0004817 GO:GO:0006423 HOGENOM:HOG000245252 KO:K01883
TIGRFAMs:TIGR00435 OrthoDB:EOG45TGWF RefSeq:XP_682069.1
ProteinModelPortal:Q5ASD0 STRING:Q5ASD0 GeneID:2868348
KEGG:ani:AN8800.2 Uniprot:Q5ASD0
Length = 838
Score = 316 (116.3 bits), Expect = 2.1e-44, Sum P(3) = 2.1e-44
Identities = 56/79 (70%), Positives = 65/79 (82%)
Query: 778 GDLSSQEASEKRSPNDFALWKKSKAGEPWWSSPWGEGRPGWHIECSVMASAVLGPQLDIH 837
G L+++ +EKRS +DFALWK SK GEP WSS WG GRPGWHIECS MASA LG +DIH
Sbjct: 369 GSLANK-TTEKRSKSDFALWKSSKPGEPSWSSSWGRGRPGWHIECSAMASARLGKHMDIH 427
Query: 838 TGGVDLKFPHHDNELAQAE 856
+GG+DL FPHHDNELAQ+E
Sbjct: 428 SGGIDLAFPHHDNELAQSE 446
Score = 153 (58.9 bits), Expect = 1.1e-35, Sum P(2) = 1.1e-35
Identities = 37/75 (49%), Positives = 48/75 (64%)
Query: 115 DETVLPPTVLTRVSEYIPEIVASYIEKIIANGLAYES-NGSVYFNVNAFDSQPNHYYAKL 173
D VL P LTRV+EY EI A ++EKI+ N Y S +GSVYF++NAF++ YA+L
Sbjct: 296 DLNVLRPDELTRVTEYGQEI-ADFVEKIVENKFGYVSADGSVYFDINAFEAA-GFPYARL 353
Query: 174 VPEAYGDTKTLQEGE 188
P + D K L EGE
Sbjct: 354 EPWSRSDNKLLAEGE 368
Score = 146 (56.5 bits), Expect = 2.1e-44, Sum P(3) = 2.1e-44
Identities = 31/85 (36%), Positives = 50/85 (58%)
Query: 434 KSYITFDILRRILSEYFNYNITYAMNITDIDDK-----IIKRARQNYLFEKHVQENEIQT 488
++Y++ DI+RRI+ +YF +N+ + MNITD+DDK II RARQ +LF K V +
Sbjct: 99 RNYVSTDIIRRIMRDYFKFNVHFVMNITDVDDKVNGVQIILRARQQHLFTKFVTAHPTVD 158
Query: 489 SKILKDIGEVMGAFESKMKLVTDPD 513
++L + A+ K + P+
Sbjct: 159 EEVLDVAKKAYAAYLKKNLPLLSPE 183
Score = 135 (52.6 bits), Expect = 2.1e-44, Sum P(3) = 2.1e-44
Identities = 33/66 (50%), Positives = 41/66 (62%)
Query: 597 KLLTAVRDPLSDWLDSLHGSSIT--DNSIFATLPKHWEAEFHKDMADLNVLPPTVLTRVS 654
+ T +D L +LD+L GS I D+SIF L + +E F KDM DLNVL P LTRV+
Sbjct: 250 RFYTDAQDLLLPYLDALEGSLIDADDHSIFTKLTRKYEERFMKDMDDLNVLRPDELTRVT 309
Query: 655 EYIPEI 660
EY EI
Sbjct: 310 EYGQEI 315
Score = 126 (49.4 bits), Expect = 5.3e-15, Sum P(2) = 5.3e-15
Identities = 40/143 (27%), Positives = 67/143 (46%)
Query: 260 MKEFFLNVKDHIRNLKFPATTVSSFEKWTQADLELSTRFIQTKNNVHAALCDNMDTRSAL 319
+ FF+ VKD + PA++ D L+ K+ VH LCD+ +T +
Sbjct: 527 LNNFFIRVKDPAAR-QGPASST---------DTTLAEALEAAKSAVHEQLCDSFNTPGMM 576
Query: 320 DSIRDCISQVNIYLRGTPNQLLLRDIGAYVTKILTVFGCIGDVKNIGFPLGGTGVESTNL 379
+SI + I++ NI + T N + + +VT ++ V G G +G +G++ +
Sbjct: 577 NSISELITKYNIADKSTLNPKDVEAVARWVTYMVNVLGLNGQTPADSREIGWSGID---V 633
Query: 380 EELVLPYLTILSEFRDNIRTEAR 402
E P+L LS RD +R AR
Sbjct: 634 PEEAKPFLYPLSAMRDALRQSAR 656
Score = 88 (36.0 bits), Expect = 4.6e-11, Sum P(2) = 4.6e-11
Identities = 24/67 (35%), Positives = 35/67 (52%)
Query: 381 ELVLPYLTILSEFRDNIRT-EARLIKSTEILNQCDRLRDEVLPNVGVRLEDIEGKSYITF 439
E PY T++S FR + + + E+L CDRLRD L ++GV LED E I
Sbjct: 680 EKTKPYATVVSNFRTKVSSLQDSGDLGKEVLALCDRLRDVDLFDLGVYLEDRENLPAIVR 739
Query: 440 DILRRIL 446
+ R ++
Sbjct: 740 PVSRDLI 746
Score = 38 (18.4 bits), Expect = 1.2e-23, Sum P(2) = 1.2e-23
Identities = 7/14 (50%), Positives = 11/14 (78%)
Query: 377 TNLEELVLPYLTIL 390
T+ ++L+LPYL L
Sbjct: 253 TDAQDLLLPYLDAL 266
>UNIPROTKB|A8IET6 [details] [associations]
symbol:CHLREDRAFT_188223 "Predicted protein" species:3055
"Chlamydomonas reinhardtii" [GO:0004817 "cysteine-tRNA ligase
activity" evidence=ISS] [GO:0005829 "cytosol" evidence=ISS]
[GO:0006423 "cysteinyl-tRNA aminoacylation" evidence=ISS]
HAMAP:MF_00041 InterPro:IPR009080 InterPro:IPR015273
InterPro:IPR015803 SMART:SM00840 Pfam:PF01406 GO:GO:0005829
GO:GO:0005524 Gene3D:3.40.50.620 InterPro:IPR014729 SUPFAM:SSF47323
InterPro:IPR024909 PANTHER:PTHR10890 PRINTS:PR00983 GO:GO:0004817
GO:GO:0006423 KO:K01883 TIGRFAMs:TIGR00435 EMBL:DS496116
RefSeq:XP_001703324.1 EnsemblPlants:EDP06006 GeneID:5728955
KEGG:cre:CHLREDRAFT_188223 ProtClustDB:CLSN2924129
BioCyc:CHLAMY:CHLREDRAFT_188223-MONOMER Uniprot:A8IET6
Length = 665
Score = 344 (126.2 bits), Expect = 1.0e-43, Sum P(3) = 1.0e-43
Identities = 60/82 (73%), Positives = 67/82 (81%)
Query: 781 SSQEASEKRSPNDFALWKKSKAGEPWWSSPWGEGRPGWHIECSVMASAVLGPQLDIHTGG 840
S+ E SEKRSP DFALWK +K GEP W SPWG GRPGWHIECS MAS+++G +LDIHTGG
Sbjct: 289 SNFETSEKRSPQDFALWKAAKPGEPAWESPWGVGRPGWHIECSAMASSIIGSRLDIHTGG 348
Query: 841 VDLKFPHHDNELAQAEGLPTHD 862
DL+FPHHDNELAQAE HD
Sbjct: 349 EDLRFPHHDNELAQAEAYYHHD 370
Score = 191 (72.3 bits), Expect = 1.0e-25, Sum P(3) = 1.0e-25
Identities = 53/163 (32%), Positives = 86/163 (52%)
Query: 240 YGKVRVHLSQKQQSLKL-VVIMKEFFLNVKDHIRNLKFPATTVSSFEKWTQADLELSTRF 298
+ K ++ Q + +K+ ++ FF NV IRN ++ ++ ++WT D +L+ R
Sbjct: 423 WNKTMMYGEQSRTEMKVREAQLRNFFGNVDAAIRN----SSVNTNEQRWTTEDFDLNNRI 478
Query: 299 IQTKNNVHAALCDNMDTRSALDSIRDCISQVNIYLR-----GTPNQLLLRDIGAYVTKIL 353
+ T+ V AAL DN++T + +D++ D I VN YL G LLLR A+VT+IL
Sbjct: 479 LATQAAVDAALRDNINTPAVMDALSDLIKAVNKYLADKSEPGAARALLLRKAAAFVTRIL 538
Query: 354 TVFGCI-GDVKNIGFPLGGTGVESTNLEELVLPYLTILSEFRD 395
+VFG + G +GF + S+ + YL L+ FRD
Sbjct: 539 SVFGIVDGPSDRLGFTEMSSSAASS--DAAAARYLDALAAFRD 579
Score = 154 (59.3 bits), Expect = 1.0e-43, Sum P(3) = 1.0e-43
Identities = 34/100 (34%), Positives = 61/100 (61%)
Query: 434 KSYITFDILRRILSEYFNYNITYAMNITDIDDKIIKRARQNYLFEKHVQENEIQTSKILK 493
++Y++FDI+RR+L +YF YN MN+TD+DDKII RAR+N+L ++ + +++ +K
Sbjct: 68 RNYLSFDIVRRVLEDYFGYNCLMVMNVTDVDDKIILRARRNFLLAQYKSSGK--SAEEVK 125
Query: 494 D--IGEVMGAFESKMKLVTDPDKLTMMKNILSNVQEAKQD 531
+ I + + K V + + + + K+ S EA+ D
Sbjct: 126 EFTIEAIQAGIAKQQKKVAEMEAM-VAKD--STEAEAEPD 162
Score = 151 (58.2 bits), Expect = 1.0e-25, Sum P(3) = 1.0e-25
Identities = 42/98 (42%), Positives = 57/98 (58%)
Query: 121 PTVLTRVSEYIPEIVASYIEKIIANGLAYESNGSVYFNVNAFDSQPNHYYAKLVPEAYGD 180
P VLTRVSEYIPEI+ Y+ +II NG+AY SNGSVYF D+Q ++ A L E +
Sbjct: 239 PDVLTRVSEYIPEII-EYVTRIIGNGMAYASNGSVYF-----DTQ--NFSAALAAEGESN 290
Query: 181 TKTLQEGEVRGYPPWPARIEGL-ADETP---NRLKYHI 214
+T ++ + + W A G A E+P R +HI
Sbjct: 291 FETSEKRSPQDFALWKAAKPGEPAWESPWGVGRPGWHI 328
Score = 82 (33.9 bits), Expect = 1.0e-43, Sum P(3) = 1.0e-43
Identities = 18/28 (64%), Positives = 20/28 (71%)
Query: 634 EFHKDMADLNVLPPTVLTRVSEYIPEIV 661
EF +DM L P VLTRVSEYIPEI+
Sbjct: 226 EFLEDMDALGCRRPDVLTRVSEYIPEII 253
Score = 80 (33.2 bits), Expect = 1.0e-25, Sum P(3) = 1.0e-25
Identities = 18/46 (39%), Positives = 27/46 (58%)
Query: 386 YLTILSEFRDNIRTEARLIKST-EILNQCDRLRDEVLPNVGVRLED 430
Y+ + F D ++ A + E+L CD+LRD L ++GVRLED
Sbjct: 617 YIDTVVAFADQVQALASSSAAPGEVLAACDQLRDSTLVDMGVRLED 662
>DICTYBASE|DDB_G0287159 [details] [associations]
symbol:cysS "cysteinyl-tRNA synthetase" species:44689
"Dictyostelium discoideum" [GO:0045335 "phagocytic vesicle"
evidence=IDA] [GO:0006423 "cysteinyl-tRNA aminoacylation"
evidence=IEA;ISS;IBA] [GO:0006418 "tRNA aminoacylation for protein
translation" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA;ISS] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0004817 "cysteine-tRNA ligase activity" evidence=IEA;ISS;IBA]
[GO:0004812 "aminoacyl-tRNA ligase activity" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0000049 "tRNA
binding" evidence=ISS] [GO:0005829 "cytosol" evidence=IBA]
[GO:0046872 "metal ion binding" evidence=IEA] [GO:0016874 "ligase
activity" evidence=IEA] [GO:0006412 "translation" evidence=IEA]
[GO:0044351 "macropinocytosis" evidence=RCA] InterPro:IPR009080
InterPro:IPR015803 PROSITE:PS00178 dictyBase:DDB_G0287159
Pfam:PF01406 GO:GO:0005829 GO:GO:0005524 GO:GO:0045335
GenomeReviews:CM000153_GR GO:GO:0046872 GO:GO:0000049
Gene3D:3.40.50.620 InterPro:IPR014729 SUPFAM:SSF47323
EMBL:AAFI02000098 eggNOG:COG0215 InterPro:IPR024909
PANTHER:PTHR10890 PRINTS:PR00983 GO:GO:0004817 GO:GO:0006423
HSSP:P21888 KO:K01883 TIGRFAMs:TIGR00435 RefSeq:XP_637369.1
ProteinModelPortal:Q54KR1 STRING:Q54KR1 EnsemblProtists:DDB0231318
GeneID:8625991 KEGG:ddi:DDB_G0287159 OMA:VARWFRH
ProtClustDB:PTZ00399 Uniprot:Q54KR1
Length = 660
Score = 329 (120.9 bits), Expect = 2.0e-43, Sum P(3) = 2.0e-43
Identities = 60/80 (75%), Positives = 67/80 (83%)
Query: 778 GDLSSQEA-SEKRSPNDFALWKKSKAGEPWWSSPWGEGRPGWHIECSVMASAVLGPQLDI 836
G L++ A SEKRS DFALWKKSK GEP W+SPWGEGRPGWHIECS MAS +LG +DI
Sbjct: 211 GSLTATSAVSEKRSGFDFALWKKSKPGEPVWNSPWGEGRPGWHIECSAMASDLLGGNIDI 270
Query: 837 HTGGVDLKFPHHDNELAQAE 856
H+GG DLKFPHHDNELAQ+E
Sbjct: 271 HSGGSDLKFPHHDNELAQSE 290
Score = 249 (92.7 bits), Expect = 7.0e-34, Sum P(2) = 7.0e-34
Identities = 84/330 (25%), Positives = 149/330 (45%)
Query: 239 KYGKVRVHLSQKQ-QSLKLVVIMKEFFLNVKDHIRNLKFPATTVSSFEKWTQADLELSTR 297
KY K + + ++++ EFF K +R+ + +S + WTQA+ +L+
Sbjct: 345 KYDKAMNYSPESMGYAIEMEKTFVEFFHTAKQILRD-----SPLSLPQFWTQAEKDLNKH 399
Query: 298 FIQTKNNVHAALCDNMDTRSALDSIRDCISQVNIYLRG------TPNQLLLRDIGAYVTK 351
+ VH + DN +T AL ++ D +++ N+Y+R P L+ I Y+T
Sbjct: 400 LQNANDQVHQFILDNFNTSDALKTLSDLVNKTNVYIRSCAEQKTNPRLNLISAIAEYITY 459
Query: 352 ILTVFGCIGDV---KNIGFPLGGTGVESTNLEELVLPYLTILSEFRDNIRTEARLIKSTE 408
I +VFG IGF G G N+EE + P L L++FR +R A +T
Sbjct: 460 IFSVFGLTESSTASSMIGFGSAGKG----NIEEEMTPILNALTQFRSEVRASAIAKDTTS 515
Query: 409 ILNQCDRLRDEVLPNVGVRLEDIEGKSYITFDILRRILSEYFNYNITYAMNITDIDDKII 468
IL CD LRDEVLP +GV+++D KS T + + E I I + +
Sbjct: 516 ILKTCDNLRDEVLPLLGVKIDD---KSATTA-MWKFEDKETLKKEIEQKKEI-EKKKQAD 570
Query: 469 KRARQNYLFEKHVQENEIQTSKILKDIGEVMGAFESKMKLVTDPDKLTMMKNILSNVQEA 528
K ++ L EK ++++I ++ + + F D + + + K+ L +Q+
Sbjct: 571 KEEKEKKLKEKF-EKSKIPPQQLFINETDKYSKFNELGMPTHDKEGVEITKSQLKKLQKE 629
Query: 529 KQDISAQPEGTINNIKNVTFQKLLTAVRDP 558
+ + + + ++ T LT+ + P
Sbjct: 630 YDNQTKEHNNYLKSLSTSTSSPTLTSTQSP 659
Score = 203 (76.5 bits), Expect = 2.0e-43, Sum P(3) = 2.0e-43
Identities = 42/71 (59%), Positives = 50/71 (70%)
Query: 118 VLPPTVLTRVSEYIPEIVASYIEKIIANGLAYESNGSVYFNVNAFDSQPNHYYAKLVPEA 177
VLPP LTRV+EY+P+IV Y+EKII+NG AYESNGSVYF+ AF H Y KL P +
Sbjct: 143 VLPPDALTRVTEYVPQIV-EYVEKIISNGFAYESNGSVYFDTVAFSKA--HDYGKLEPNS 199
Query: 178 YGDTKTLQEGE 188
G+ K EGE
Sbjct: 200 VGNEKLAAEGE 210
Score = 147 (56.8 bits), Expect = 1.3e-37, Sum P(3) = 1.3e-37
Identities = 43/101 (42%), Positives = 54/101 (53%)
Query: 434 KSYITFDILRRILSEYFNYNITYAMNITDIDDKIIKRARQNYLFEKHVQENEIQTSKILK 493
++YI+FDI+RRI+ Y +NI Y MNITDIDDKII RA EN I S + K
Sbjct: 79 RTYISFDIIRRIMKNYLGFNIQYVMNITDIDDKIIIRAN----------ENGISHSDLSK 128
Query: 494 DIGEVMGAFESKMKL--VTDPDKLTMMKNILSNVQEAKQDI 532
E AF MKL V PD LT + + + E + I
Sbjct: 129 K-WET--AFFEDMKLLNVLPPDALTRVTEYVPQIVEYVEKI 166
Score = 118 (46.6 bits), Expect = 1.4e-34, Sum P(3) = 1.4e-34
Identities = 24/43 (55%), Positives = 30/43 (69%)
Query: 620 DNSI-FATLPKHWEAEFHKDMADLNVLPPTVLTRVSEYIPEIV 661
+N I + L K WE F +DM LNVLPP LTRV+EY+P+IV
Sbjct: 118 ENGISHSDLSKKWETAFFEDMKLLNVLPPDALTRVTEYVPQIV 160
Score = 48 (22.0 bits), Expect = 2.5e-27, Sum P(3) = 2.5e-27
Identities = 12/27 (44%), Positives = 15/27 (55%)
Query: 573 DNSI-FATLPKHWEAEFHKDMADLNKL 598
+N I + L K WE F +DM LN L
Sbjct: 118 ENGISHSDLSKKWETAFFEDMKLLNVL 144
Score = 47 (21.6 bits), Expect = 2.0e-43, Sum P(3) = 2.0e-43
Identities = 10/42 (23%), Positives = 16/42 (38%)
Query: 857 GLPTHDQEXXXXXXXXXXXXXXXXXXXXXXYNEYIASVQKAT 898
G+PTHD+E +N Y+ S+ +T
Sbjct: 607 GMPTHDKEGVEITKSQLKKLQKEYDNQTKEHNNYLKSLSTST 648
Score = 42 (19.8 bits), Expect = 6.5e-43, Sum P(3) = 6.5e-43
Identities = 9/38 (23%), Positives = 14/38 (36%)
Query: 910 GLPTHDQEXXXXXXXXXXXXXXXXXXXXXXYNEYIASV 947
G+PTHD+E +N Y+ S+
Sbjct: 607 GMPTHDKEGVEITKSQLKKLQKEYDNQTKEHNNYLKSL 644
>UNIPROTKB|Q7RFT4 [details] [associations]
symbol:PY04618 "Cysteinyl-tRNA synthetase" species:73239
"Plasmodium yoelii yoelii" [GO:0004817 "cysteine-tRNA ligase
activity" evidence=ISS] [GO:0005829 "cytosol" evidence=ISS]
[GO:0006423 "cysteinyl-tRNA aminoacylation" evidence=ISS]
HAMAP:MF_00041 InterPro:IPR009080 InterPro:IPR015803 Pfam:PF01406
GO:GO:0005829 GO:GO:0005524 Gene3D:3.40.50.620 InterPro:IPR014729
SUPFAM:SSF47323 eggNOG:COG0215 InterPro:IPR024909 PANTHER:PTHR10890
PRINTS:PR00983 GO:GO:0004817 GO:GO:0006423 KO:K01883
TIGRFAMs:TIGR00435 EMBL:AABL01001418 RefSeq:XP_724944.1
ProteinModelPortal:Q7RFT4 STRING:Q7RFT4 GeneID:3790275
KEGG:pyo:PY04618 EuPathDB:PlasmoDB:PY04618 Uniprot:Q7RFT4
Length = 579
Score = 311 (114.5 bits), Expect = 8.7e-39, Sum P(2) = 8.7e-39
Identities = 56/86 (65%), Positives = 64/86 (74%)
Query: 778 GDLSSQEASEKRSPNDFALWKKSKAGEPWWSSPWGEGRPGWHIECSVMASAVLGPQLDIH 837
GDL ++K S DFALWK SK EP W SPWG+GRPGWHIECS MAS +LG LDIH
Sbjct: 198 GDLGVISKNKKNS-YDFALWKSSKPNEPSWDSPWGKGRPGWHIECSTMASNILGNVLDIH 256
Query: 838 TGGVDLKFPHHDNELAQAEGLPTHDQ 863
+GG+DL+FPHHDNELAQ+E H Q
Sbjct: 257 SGGIDLRFPHHDNELAQSEAFFDHSQ 282
Score = 180 (68.4 bits), Expect = 8.7e-39, Sum P(2) = 8.7e-39
Identities = 37/72 (51%), Positives = 50/72 (69%)
Query: 118 VLPPTVLTRVSEYIPEIVASYIEKIIANGLAY-ESNGSVYFNVNAFDSQPNHYYAKLVPE 176
VL P+ +TRVSEY+ EI+ +IEKII N AY S GSVYF+++AF PNH+YA++ P
Sbjct: 127 VLLPSSITRVSEYVNEII-KFIEKIIENKYAYVSSEGSVYFDIDAFKKNPNHFYARMEPM 185
Query: 177 AYGDTKTLQEGE 188
+ D + EGE
Sbjct: 186 SVKDETKILEGE 197
Score = 149 (57.5 bits), Expect = 8.4e-21, Sum P(2) = 8.4e-21
Identities = 64/255 (25%), Positives = 113/255 (44%)
Query: 245 VHLSQKQQSLKLVVIMKEFFLNVKDHIRNLKFPATTVSSFEK-WTQADLELSTRFIQTKN 303
++ S + + + + +FF N I N+K +++ + W D +L+ F QTK
Sbjct: 335 MNYSPNGEGMTQCIEIDKFFTNFFALI-NMKIKNFDLNNCDLYWNDTDNKLNNIFRQTKT 393
Query: 304 NVHAALCDNMDTRSALDSIRDCISQVNIYLRGTPNQL-LLRDIGAYVTKILTVFGCIGDV 362
N+H DN +T AL +I+ I+++NIYL+ Q+ LL ++ Y+ I+T G D
Sbjct: 394 NIHNFFLDNFNTPEALVAIQKLITEINIYLQNGKIQIGLLLELKQYINFIMTTLGLFYDE 453
Query: 363 KNIGFPLGGTGVESTNLEELVLPYLTILSEFRDNIRT----EARLIKSTEILNQCDRLRD 418
+S N + L L +L +R NIR A+LI+ + D
Sbjct: 454 AQ--------KTKSNNFDNL----LHVLGSYRSNIRAILQKNAKLIRKISKDIKTDTSDT 501
Query: 419 EVLPNVGVRLEDIEGKSYITFDILRR--ILSEYFNYNITYAMNITDIDDKIIKRARQNYL 476
L N E I+G ++L+ IL + N+ ++ ++ ++K N L
Sbjct: 502 ATLDNNNKYNEFIKGIKTNNEELLKECDILRDQHLLNMGILIDDRPNNEFVVKVLDANQL 561
Query: 477 F-EKHVQENEIQTSK 490
EK +E ++ K
Sbjct: 562 QQEKEKRECDLNKKK 576
Score = 136 (52.9 bits), Expect = 1.2e-36, Sum P(3) = 1.2e-36
Identities = 23/40 (57%), Positives = 34/40 (85%)
Query: 434 KSYITFDILRRILSEYFNYNITYAMNITDIDDKIIKRARQ 473
++Y++FDI+RRIL+ YF Y++ +NITDIDDKIIKR+ +
Sbjct: 63 RTYVSFDIIRRILTNYFKYDVFMVINITDIDDKIIKRSEE 102
Score = 110 (43.8 bits), Expect = 1.9e-31, Sum P(2) = 1.9e-31
Identities = 24/56 (42%), Positives = 34/56 (60%)
Query: 606 LSDWLDSLHGSSITDNSIFATLPKHWEAEFHKDMADLNVLPPTVLTRVSEYIPEIV 661
++D D + S + F L + WE EF +DM LNVL P+ +TRVSEY+ EI+
Sbjct: 89 ITDIDDKIIKRSEEEKVNFTELARKWEYEFWEDMKSLNVLLPSSITRVSEYVNEII 144
Score = 64 (27.6 bits), Expect = 1.2e-36, Sum P(3) = 1.2e-36
Identities = 13/37 (35%), Positives = 22/37 (59%)
Query: 577 FATLPKHWEAEFHKDMADLNKLLTAVRDPLSDWLDSL 613
F L + WE EF +DM LN LL + +S++++ +
Sbjct: 107 FTELARKWEYEFWEDMKSLNVLLPSSITRVSEYVNEI 143
>UNIPROTKB|E9PT36 [details] [associations]
symbol:RGD1311612 "Protein RGD1311612" species:10116
"Rattus norvegicus" [GO:0004817 "cysteine-tRNA ligase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0006423 "cysteinyl-tRNA
aminoacylation" evidence=IEA] HAMAP:MF_00041 InterPro:IPR009080
InterPro:IPR015803 Pfam:PF01406 GO:GO:0005524 GO:GO:0005737
Gene3D:3.40.50.620 InterPro:IPR014729 SUPFAM:SSF47323
InterPro:IPR024909 PANTHER:PTHR10890 PRINTS:PR00983 GO:GO:0004817
GO:GO:0006423 TIGRFAMs:TIGR00435 IPI:IPI00969772
Ensembl:ENSRNOT00000064045 ArrayExpress:E9PT36 Uniprot:E9PT36
Length = 549
Score = 299 (110.3 bits), Expect = 1.4e-38, Sum P(3) = 1.4e-38
Identities = 50/71 (70%), Positives = 60/71 (84%)
Query: 786 SEKRSPNDFALWKKSKAGEPWWSSPWGEGRPGWHIECSVMASAVLGPQLDIHTGGVDLKF 845
S+KR +DFALWK +K E +W+SPWG+GRPGWHIECS MAS V G QLDIHTGG+DL F
Sbjct: 207 SDKRHSSDFALWKGAKPQEVFWASPWGDGRPGWHIECSAMASEVFGSQLDIHTGGIDLAF 266
Query: 846 PHHDNELAQAE 856
PHH+NE+AQ+E
Sbjct: 267 PHHENEIAQSE 277
Score = 130 (50.8 bits), Expect = 1.4e-38, Sum P(3) = 1.4e-38
Identities = 24/39 (61%), Positives = 31/39 (79%)
Query: 435 SYITFDILRRILSEYFNYNITYAMNITDIDDKIIKRARQ 473
SY+ FDI+RRIL+ F N+ AM+ITD+DDKIIKRA +
Sbjct: 78 SYVRFDIIRRILTSVFGCNVVMAMSITDVDDKIIKRANE 116
Score = 118 (46.6 bits), Expect = 4.6e-31, Sum P(2) = 4.6e-31
Identities = 32/80 (40%), Positives = 49/80 (61%)
Query: 98 IPPSEMFKMETDKYSQFDET--VLPPTVLTRVSEYIPEIVASYIEKIIANGLAYES-NGS 154
+ P+ + + +++ Q VLPPTV RV+E IP+I+ S+I+ IIA+G AY + GS
Sbjct: 119 VSPASLASLFEEEFKQDMAALKVLPPTVYLRVTENIPQII-SFIQGIIAHGHAYATATGS 177
Query: 155 VYFNVNAFDSQPNHYYAKLV 174
VYF++ A + Y KLV
Sbjct: 178 VYFDLRARGDK----YGKLV 193
Score = 100 (40.3 bits), Expect = 1.4e-38, Sum P(3) = 1.4e-38
Identities = 21/37 (56%), Positives = 27/37 (72%)
Query: 625 ATLPKHWEAEFHKDMADLNVLPPTVLTRVSEYIPEIV 661
A+L +E EF +DMA L VLPPTV RV+E IP+I+
Sbjct: 122 ASLASLFEEEFKQDMAALKVLPPTVYLRVTENIPQII 158
Score = 82 (33.9 bits), Expect = 3.6e-07, Sum P(2) = 3.6e-07
Identities = 42/161 (26%), Positives = 66/161 (40%)
Query: 297 RFIQTKNNVHAALCDNMDTRSALDSIRDCISQVNIYLR------GTPNQ-LLLRDIGAYV 349
R TK V AAL ++ DT A++SI D + N LR G P + I AYV
Sbjct: 384 RLASTKKAVKAALANDFDTPRAVNSILDLVHHANRQLRAVSKEAGGPRSPTVFGAIVAYV 443
Query: 350 TKILTVFG-------CI-GDVKNIGFPLGGTGVESTNLEELVLPYLTILSEFRDNIRTEA 401
+ G C+ GD + L E V Y R +
Sbjct: 444 EQFFETVGISLAKRQCVSGDSSTVA--LHCVVDELVRFRLKVRQYALATPGATGEARKQ- 500
Query: 402 RLIKSTEILNQCDRLRDEVLPNVGVRLEDIEGKSYITFDIL 442
+L + +L CD LR +++ + G+ ++D G + T+++L
Sbjct: 501 QLQERQPLLEACDALRQDLMTH-GINVKD-RGHAASTWELL 539
Score = 40 (19.1 bits), Expect = 2.4e-32, Sum P(3) = 2.4e-32
Identities = 10/21 (47%), Positives = 13/21 (61%)
Query: 578 ATLPKHWEAEFHKDMADLNKL 598
A+L +E EF +DMA L L
Sbjct: 122 ASLASLFEEEFKQDMAALKVL 142
>UNIPROTKB|D4A5T2 [details] [associations]
symbol:RGD1311612 "Protein RGD1311612" species:10116
"Rattus norvegicus" [GO:0004817 "cysteine-tRNA ligase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0006423 "cysteinyl-tRNA
aminoacylation" evidence=IEA] HAMAP:MF_00041 InterPro:IPR009080
InterPro:IPR015803 Pfam:PF01406 GO:GO:0005524 GO:GO:0005737
Gene3D:3.40.50.620 InterPro:IPR014729 SUPFAM:SSF47323
InterPro:IPR024909 PANTHER:PTHR10890 PRINTS:PR00983 GO:GO:0004817
GO:GO:0006423 TIGRFAMs:TIGR00435 GeneTree:ENSGT00390000006347
OrthoDB:EOG4B8JCV IPI:IPI00364687 ProteinModelPortal:D4A5T2
Ensembl:ENSRNOT00000019993 ArrayExpress:D4A5T2 Uniprot:D4A5T2
Length = 550
Score = 299 (110.3 bits), Expect = 1.4e-38, Sum P(3) = 1.4e-38
Identities = 50/71 (70%), Positives = 60/71 (84%)
Query: 786 SEKRSPNDFALWKKSKAGEPWWSSPWGEGRPGWHIECSVMASAVLGPQLDIHTGGVDLKF 845
S+KR +DFALWK +K E +W+SPWG+GRPGWHIECS MAS V G QLDIHTGG+DL F
Sbjct: 207 SDKRHSSDFALWKGAKPQEVFWASPWGDGRPGWHIECSAMASEVFGSQLDIHTGGIDLAF 266
Query: 846 PHHDNELAQAE 856
PHH+NE+AQ+E
Sbjct: 267 PHHENEIAQSE 277
Score = 130 (50.8 bits), Expect = 1.4e-38, Sum P(3) = 1.4e-38
Identities = 24/39 (61%), Positives = 31/39 (79%)
Query: 435 SYITFDILRRILSEYFNYNITYAMNITDIDDKIIKRARQ 473
SY+ FDI+RRIL+ F N+ AM+ITD+DDKIIKRA +
Sbjct: 78 SYVRFDIIRRILTSVFGCNVVMAMSITDVDDKIIKRANE 116
Score = 118 (46.6 bits), Expect = 4.7e-31, Sum P(2) = 4.7e-31
Identities = 32/80 (40%), Positives = 49/80 (61%)
Query: 98 IPPSEMFKMETDKYSQFDET--VLPPTVLTRVSEYIPEIVASYIEKIIANGLAYES-NGS 154
+ P+ + + +++ Q VLPPTV RV+E IP+I+ S+I+ IIA+G AY + GS
Sbjct: 119 VSPASLASLFEEEFKQDMAALKVLPPTVYLRVTENIPQII-SFIQGIIAHGHAYATATGS 177
Query: 155 VYFNVNAFDSQPNHYYAKLV 174
VYF++ A + Y KLV
Sbjct: 178 VYFDLRARGDK----YGKLV 193
Score = 100 (40.3 bits), Expect = 1.4e-38, Sum P(3) = 1.4e-38
Identities = 21/37 (56%), Positives = 27/37 (72%)
Query: 625 ATLPKHWEAEFHKDMADLNVLPPTVLTRVSEYIPEIV 661
A+L +E EF +DMA L VLPPTV RV+E IP+I+
Sbjct: 122 ASLASLFEEEFKQDMAALKVLPPTVYLRVTENIPQII 158
Score = 82 (33.9 bits), Expect = 3.6e-07, Sum P(2) = 3.6e-07
Identities = 42/161 (26%), Positives = 66/161 (40%)
Query: 297 RFIQTKNNVHAALCDNMDTRSALDSIRDCISQVNIYLR------GTPNQ-LLLRDIGAYV 349
R TK V AAL ++ DT A++SI D + N LR G P + I AYV
Sbjct: 384 RLASTKKAVKAALANDFDTPRAVNSILDLVHHANRQLRAVSKEAGGPRSPTVFGAIVAYV 443
Query: 350 TKILTVFG-------CI-GDVKNIGFPLGGTGVESTNLEELVLPYLTILSEFRDNIRTEA 401
+ G C+ GD + L E V Y R +
Sbjct: 444 EQFFETVGISLAKRQCVSGDSSTVA--LHCVVDELVRFRLKVRQYALATPGATGEARKQ- 500
Query: 402 RLIKSTEILNQCDRLRDEVLPNVGVRLEDIEGKSYITFDIL 442
+L + +L CD LR +++ + G+ ++D G + T+++L
Sbjct: 501 QLQERQPLLEACDALRQDLMTH-GINVKD-RGHAASTWELL 539
Score = 40 (19.1 bits), Expect = 2.4e-32, Sum P(3) = 2.4e-32
Identities = 10/21 (47%), Positives = 13/21 (61%)
Query: 578 ATLPKHWEAEFHKDMADLNKL 598
A+L +E EF +DMA L L
Sbjct: 122 ASLASLFEEEFKQDMAALKVL 142
>MGI|MGI:1919191 [details] [associations]
symbol:Cars2 "cysteinyl-tRNA synthetase 2
(mitochondrial)(putative)" species:10090 "Mus musculus" [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0004812 "aminoacyl-tRNA
ligase activity" evidence=IEA] [GO:0004817 "cysteine-tRNA ligase
activity" evidence=IBA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0005739 "mitochondrion"
evidence=IEA] [GO:0005829 "cytosol" evidence=IBA] [GO:0006412
"translation" evidence=IEA] [GO:0006418 "tRNA aminoacylation for
protein translation" evidence=IEA] [GO:0006423 "cysteinyl-tRNA
aminoacylation" evidence=IBA] [GO:0016874 "ligase activity"
evidence=IEA] [GO:0046872 "metal ion binding" evidence=IEA]
InterPro:IPR009080 InterPro:IPR015803 PROSITE:PS00178 Pfam:PF01406
MGI:MGI:1919191 GO:GO:0005829 GO:GO:0005524 GO:GO:0005759
GO:GO:0046872 Gene3D:3.40.50.620 InterPro:IPR014729 SUPFAM:SSF47323
eggNOG:COG0215 InterPro:IPR024909 PANTHER:PTHR10890 PRINTS:PR00983
GO:GO:0004817 GO:GO:0006423 HSSP:P21888 KO:K01883
TIGRFAMs:TIGR00435 CTD:79587 HOGENOM:HOG000245250
HOVERGEN:HBG094012 OrthoDB:EOG4B8JCV ChiTaRS:CARS2 EMBL:AK009937
EMBL:AK038968 IPI:IPI00896595 RefSeq:NP_077210.1 UniGene:Mm.196576
ProteinModelPortal:Q8BYM8 SMR:Q8BYM8 STRING:Q8BYM8
PhosphoSite:Q8BYM8 PaxDb:Q8BYM8 PRIDE:Q8BYM8 GeneID:71941
KEGG:mmu:71941 UCSC:uc009kvh.2 InParanoid:Q8BYM8 NextBio:335006
Bgee:Q8BYM8 Genevestigator:Q8BYM8 GermOnline:ENSMUSG00000056228
Uniprot:Q8BYM8
Length = 551
Score = 295 (108.9 bits), Expect = 4.5e-38, Sum P(3) = 4.5e-38
Identities = 49/71 (69%), Positives = 59/71 (83%)
Query: 786 SEKRSPNDFALWKKSKAGEPWWSSPWGEGRPGWHIECSVMASAVLGPQLDIHTGGVDLKF 845
S+KR +DFALWK +K E +W+SPWG+GRPGWHIECS MAS V G LDIHTGG+DL F
Sbjct: 206 SDKRHSSDFALWKAAKPQEVFWASPWGDGRPGWHIECSTMASEVFGSHLDIHTGGIDLAF 265
Query: 846 PHHDNELAQAE 856
PHH+NE+AQ+E
Sbjct: 266 PHHENEIAQSE 276
Score = 130 (50.8 bits), Expect = 4.5e-38, Sum P(3) = 4.5e-38
Identities = 24/39 (61%), Positives = 31/39 (79%)
Query: 435 SYITFDILRRILSEYFNYNITYAMNITDIDDKIIKRARQ 473
SY+ FDI+RRIL+ F N+ AM+ITD+DDKIIKRA +
Sbjct: 78 SYVRFDIIRRILTRVFGCNVVMAMSITDVDDKIIKRANE 116
Score = 123 (48.4 bits), Expect = 4.2e-31, Sum P(2) = 4.2e-31
Identities = 33/80 (41%), Positives = 50/80 (62%)
Query: 98 IPPSEMFKMETDKYSQFDET--VLPPTVLTRVSEYIPEIVASYIEKIIANGLAYES-NGS 154
+ P+ + + +++ Q VLPPTV RV+E IP+I+A +IE IIA+G AY + GS
Sbjct: 119 VTPASLASLFEEEFKQDMAALKVLPPTVYLRVTENIPQIIA-FIEGIIAHGHAYSTATGS 177
Query: 155 VYFNVNAFDSQPNHYYAKLV 174
VYF+++A + Y KLV
Sbjct: 178 VYFDLHARGDK----YGKLV 193
Score = 100 (40.3 bits), Expect = 4.5e-38, Sum P(3) = 4.5e-38
Identities = 21/37 (56%), Positives = 27/37 (72%)
Query: 625 ATLPKHWEAEFHKDMADLNVLPPTVLTRVSEYIPEIV 661
A+L +E EF +DMA L VLPPTV RV+E IP+I+
Sbjct: 122 ASLASLFEEEFKQDMAALKVLPPTVYLRVTENIPQII 158
Score = 87 (35.7 bits), Expect = 3.2e-08, Sum P(2) = 3.2e-08
Identities = 41/158 (25%), Positives = 71/158 (44%)
Query: 297 RFIQTKNNVHAALCDNMDTRSALDSIRDCISQVNIYLRGTPNQLL-LRD---IGAYVTKI 352
R TK V AAL ++ DT A+++I D + N LR + R GA ++ +
Sbjct: 383 RLTSTKKAVKAALANDFDTPRAVNTILDLVHHANRQLRAVSKEASGPRSPTVFGAIISYV 442
Query: 353 LTVFGCIG-DVKNIGFPLGGTGVESTN--LEELVLPYLTILSEFRDN--IRTEAR---LI 404
F +G + N G + + ++ELV L + D EAR L
Sbjct: 443 EQFFETVGISLANRQCVSGDSSTVTLRCVVDELVRFRLKVRQYALDTPGAAGEARKRQLQ 502
Query: 405 KSTEILNQCDRLRDEVLPNVGVRLEDIEGKSYITFDIL 442
+ +L CD LR +++ + G+ ++D G + T+++L
Sbjct: 503 ERQPLLEACDTLRQDLVTH-GINVKD-RGSAASTWELL 538
Score = 40 (19.1 bits), Expect = 7.6e-32, Sum P(3) = 7.6e-32
Identities = 10/21 (47%), Positives = 13/21 (61%)
Query: 578 ATLPKHWEAEFHKDMADLNKL 598
A+L +E EF +DMA L L
Sbjct: 122 ASLASLFEEEFKQDMAALKVL 142
>UNIPROTKB|F1Q0T9 [details] [associations]
symbol:CARS2 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0006423 "cysteinyl-tRNA aminoacylation"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] [GO:0004817 "cysteine-tRNA ligase
activity" evidence=IEA] HAMAP:MF_00041 InterPro:IPR009080
InterPro:IPR015273 InterPro:IPR015803 Pfam:PF09190 SMART:SM00840
Pfam:PF01406 GO:GO:0005524 GO:GO:0005737 Gene3D:3.40.50.620
InterPro:IPR014729 SUPFAM:SSF47323 InterPro:IPR024909
PANTHER:PTHR10890 PRINTS:PR00983 GO:GO:0004817 GO:GO:0006423
TIGRFAMs:TIGR00435 GeneTree:ENSGT00390000006347 OMA:IMVMGIT
EMBL:AAEX03013387 Ensembl:ENSCAFT00000009842 Uniprot:F1Q0T9
Length = 496
Score = 292 (107.8 bits), Expect = 4.5e-38, Sum P(3) = 4.5e-38
Identities = 50/79 (63%), Positives = 61/79 (77%)
Query: 778 GDLSSQEASEKRSPNDFALWKKSKAGEPWWSSPWGEGRPGWHIECSVMASAVLGPQLDIH 837
G L S+KR +DFALWK +K E +W+SPWG+GRPGWHIECS ++S V G QLDIH
Sbjct: 144 GPLGEPVDSDKRHASDFALWKAAKPQEVFWASPWGKGRPGWHIECSTISSLVFGSQLDIH 203
Query: 838 TGGVDLKFPHHDNELAQAE 856
+GGVDL FPHH+NE+AQ E
Sbjct: 204 SGGVDLAFPHHENEIAQCE 222
Score = 126 (49.4 bits), Expect = 4.5e-38, Sum P(3) = 4.5e-38
Identities = 23/39 (58%), Positives = 29/39 (74%)
Query: 435 SYITFDILRRILSEYFNYNITYAMNITDIDDKIIKRARQ 473
SY+ FDI+RRIL+ F YN+ M ITD+DDKII RA +
Sbjct: 24 SYVRFDIIRRILTRVFGYNVIMVMGITDVDDKIIHRASE 62
Score = 125 (49.1 bits), Expect = 4.7e-08, Sum P(2) = 4.7e-08
Identities = 36/106 (33%), Positives = 56/106 (52%)
Query: 98 IPPSEMFKMETDKYSQFDET--VLPPTVLTRVSEYIPEIVASYIEKIIANGLAYES-NGS 154
+ P+ + + +++ Q VLPPTV RV+E IP+I+ S+IE IIANG AY + G+
Sbjct: 65 VSPASLANLYEEEFKQDMAALKVLPPTVYVRVTETIPQII-SFIEGIIANGHAYSTAQGN 123
Query: 155 VYFNVNAFDSQPNHYYAKLV---PEAYGDTKTLQEGEVRGYPPWPA 197
VYF++ + + Y KLV P G+ + + W A
Sbjct: 124 VYFDLQSRGDK----YGKLVGVVPGPLGEPVDSDKRHASDFALWKA 165
Score = 102 (41.0 bits), Expect = 4.5e-38, Sum P(3) = 4.5e-38
Identities = 21/37 (56%), Positives = 27/37 (72%)
Query: 625 ATLPKHWEAEFHKDMADLNVLPPTVLTRVSEYIPEIV 661
A+L +E EF +DMA L VLPPTV RV+E IP+I+
Sbjct: 68 ASLANLYEEEFKQDMAALKVLPPTVYVRVTETIPQII 104
Score = 82 (33.9 bits), Expect = 4.7e-08, Sum P(2) = 4.7e-08
Identities = 38/159 (23%), Positives = 69/159 (43%)
Query: 297 RFIQTKNNVHAALCDNMDTRSALDSIRDCISQVNIYLR------GTPNQ-LLLRDIGAYV 349
R T+ V AAL D+ +T +A+D+I D I N L+ G P + I +Y+
Sbjct: 329 RLCHTQEAVKAALADDFNTPAAVDAIMDLIHHGNRQLKARTKEPGGPRSPAVFGSIVSYI 388
Query: 350 TKILTVFGC-IGDVKNIGFPLGGTGVESTNLEELV-----LPYLTILSEFRDNIRTEARL 403
+ G + D + + + S +EELV + + +E +L
Sbjct: 389 KQFFETVGISLADRQLVSEDSSRATLHSV-VEELVRFRLKVRQFALATEAATREAGRQQL 447
Query: 404 IKSTEILNQCDRLRDEVLPNVGVRLEDIEGKSYITFDIL 442
+ +L CD LR ++ + G+ ++D S T+++L
Sbjct: 448 LDRRPLLEACDTLRQDLAAH-GISIKDRSSTS--TWELL 483
Score = 41 (19.5 bits), Expect = 9.8e-32, Sum P(3) = 9.8e-32
Identities = 10/21 (47%), Positives = 13/21 (61%)
Query: 578 ATLPKHWEAEFHKDMADLNKL 598
A+L +E EF +DMA L L
Sbjct: 68 ASLANLYEEEFKQDMAALKVL 88
>UNIPROTKB|F1MLA9 [details] [associations]
symbol:CARS2 "Cysteine--tRNA ligase, mitochondrial"
species:9913 "Bos taurus" [GO:0006423 "cysteinyl-tRNA
aminoacylation" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0004817 "cysteine-tRNA
ligase activity" evidence=IEA] HAMAP:MF_00041 InterPro:IPR009080
InterPro:IPR015803 Pfam:PF01406 GO:GO:0005524 GO:GO:0005737
Gene3D:3.40.50.620 InterPro:IPR014729 SUPFAM:SSF47323
InterPro:IPR024909 PANTHER:PTHR10890 PRINTS:PR00983 GO:GO:0004817
GO:GO:0006423 EMBL:DAAA02034912 TIGRFAMs:TIGR00435
GeneTree:ENSGT00390000006347 IPI:IPI00713506 UniGene:Bt.21918
Ensembl:ENSBTAT00000015242 OMA:HYRSAIE Uniprot:F1MLA9
Length = 555
Score = 301 (111.0 bits), Expect = 1.2e-37, Sum P(3) = 1.2e-37
Identities = 51/79 (64%), Positives = 61/79 (77%)
Query: 778 GDLSSQEASEKRSPNDFALWKKSKAGEPWWSSPWGEGRPGWHIECSVMASAVLGPQLDIH 837
G + S+KR +DFALWK +K EP+W SPWG+GRPGWHIECS +AS V G QLDIH
Sbjct: 205 GPVGEPVDSDKRHTSDFALWKAAKPQEPFWGSPWGDGRPGWHIECSTIASLVFGSQLDIH 264
Query: 838 TGGVDLKFPHHDNELAQAE 856
+GGVDL FPHH+NE+AQ E
Sbjct: 265 SGGVDLAFPHHENEIAQCE 283
Score = 126 (49.4 bits), Expect = 4.2e-32, Sum P(2) = 4.2e-32
Identities = 32/85 (37%), Positives = 52/85 (61%)
Query: 98 IPPSEMFKMETDKYSQFDET--VLPPTVLTRVSEYIPEIVASYIEKIIANGLAY-ESNGS 154
+ P+ + ++ + + Q VLPPT RV+E++P+IVA +IE++IANG AY + G+
Sbjct: 126 VSPASLARLYEEDFKQDMAALKVLPPTAYLRVTEHVPQIVA-FIERLIANGHAYCTAKGN 184
Query: 155 VYFNVNAFDSQPNHYYAKLVPEAYG 179
VYF++ + + Y KLV A G
Sbjct: 185 VYFDLQSRGDR----YGKLVGVAPG 205
Score = 119 (46.9 bits), Expect = 1.2e-37, Sum P(3) = 1.2e-37
Identities = 22/39 (56%), Positives = 28/39 (71%)
Query: 435 SYITFDILRRILSEYFNYNITYAMNITDIDDKIIKRARQ 473
SY+ FDI+RRILS F + M ITD+DDKII+RA +
Sbjct: 85 SYVRFDIIRRILSRVFGCTVVMVMGITDVDDKIIRRANE 123
Score = 100 (40.3 bits), Expect = 1.2e-37, Sum P(3) = 1.2e-37
Identities = 19/37 (51%), Positives = 28/37 (75%)
Query: 625 ATLPKHWEAEFHKDMADLNVLPPTVLTRVSEYIPEIV 661
A+L + +E +F +DMA L VLPPT RV+E++P+IV
Sbjct: 129 ASLARLYEEDFKQDMAALKVLPPTAYLRVTEHVPQIV 165
Score = 91 (37.1 bits), Expect = 6.0e-09, Sum P(2) = 6.0e-09
Identities = 47/167 (28%), Positives = 76/167 (45%)
Query: 289 QADLELSTRFIQTKNNVHAALCDNMDTRSALDSIRDCISQVNIYLRGTPNQLL-LRD--- 344
Q D+ L R +TK V AAL D+ DT A+D++ D + N L+ + R
Sbjct: 383 QEDV-LWERLGRTKAAVQAALADDFDTVRAVDAVMDLVHHGNRQLKAASEEPRGPRSPAV 441
Query: 345 IGAYVTKILTVFGCIGD--VKNIGFPLGGTGVESTNL-EELVLPYLTILS------EFRD 395
+GA V + F +G + P G+ +L EELV L + E
Sbjct: 442 LGAVVASVEHFFETVGVSLAERQCVPGAGSPAALHSLVEELVCFRLKVRQFALASGEAPG 501
Query: 396 NIRTEARLIKSTEILNQCDRLRDEVLPNVGVRLEDIEGKSYITFDIL 442
R + RL++ +L CD LR ++ + G+ ++D G S T+++L
Sbjct: 502 EARRQ-RLLERQPLLEACDALRRDLAVH-GISIKDRSGSS--TWELL 544
Score = 40 (19.1 bits), Expect = 2.1e-31, Sum P(3) = 2.1e-31
Identities = 9/21 (42%), Positives = 14/21 (66%)
Query: 578 ATLPKHWEAEFHKDMADLNKL 598
A+L + +E +F +DMA L L
Sbjct: 129 ASLARLYEEDFKQDMAALKVL 149
>UNIPROTKB|Q2KIF8 [details] [associations]
symbol:CARS2 "Cysteine--tRNA ligase, mitochondrial"
species:9913 "Bos taurus" [GO:0006423 "cysteinyl-tRNA
aminoacylation" evidence=ISS] [GO:0005829 "cytosol" evidence=ISS]
[GO:0004817 "cysteine-tRNA ligase activity" evidence=ISS]
[GO:0005759 "mitochondrial matrix" evidence=IEA] [GO:0046872 "metal
ion binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR009080 InterPro:IPR015803 PROSITE:PS00178 Pfam:PF01406
GO:GO:0005829 GO:GO:0005524 GO:GO:0005759 GO:GO:0046872
Gene3D:3.40.50.620 InterPro:IPR014729 SUPFAM:SSF47323
eggNOG:COG0215 InterPro:IPR024909 PANTHER:PTHR10890 PRINTS:PR00983
GO:GO:0004817 GO:GO:0006423 KO:K01883 TIGRFAMs:TIGR00435
EMBL:BC112654 IPI:IPI00713506 RefSeq:NP_001039409.1
UniGene:Bt.21918 ProteinModelPortal:Q2KIF8 STRING:Q2KIF8
PRIDE:Q2KIF8 GeneID:506598 KEGG:bta:506598 CTD:79587
HOGENOM:HOG000245250 HOVERGEN:HBG094012 InParanoid:Q2KIF8
OrthoDB:EOG4B8JCV NextBio:20867673 Uniprot:Q2KIF8
Length = 555
Score = 301 (111.0 bits), Expect = 1.2e-37, Sum P(3) = 1.2e-37
Identities = 51/79 (64%), Positives = 61/79 (77%)
Query: 778 GDLSSQEASEKRSPNDFALWKKSKAGEPWWSSPWGEGRPGWHIECSVMASAVLGPQLDIH 837
G + S+KR +DFALWK +K EP+W SPWG+GRPGWHIECS +AS V G QLDIH
Sbjct: 205 GPVGEPVDSDKRHTSDFALWKAAKPQEPFWGSPWGDGRPGWHIECSTIASLVFGSQLDIH 264
Query: 838 TGGVDLKFPHHDNELAQAE 856
+GGVDL FPHH+NE+AQ E
Sbjct: 265 SGGVDLAFPHHENEIAQCE 283
Score = 126 (49.4 bits), Expect = 4.2e-32, Sum P(2) = 4.2e-32
Identities = 32/85 (37%), Positives = 52/85 (61%)
Query: 98 IPPSEMFKMETDKYSQFDET--VLPPTVLTRVSEYIPEIVASYIEKIIANGLAY-ESNGS 154
+ P+ + ++ + + Q VLPPT RV+E++P+IVA +IE++IANG AY + G+
Sbjct: 126 VSPASLARLYEEDFKQDMAALKVLPPTAYLRVTEHVPQIVA-FIERLIANGHAYCTAKGN 184
Query: 155 VYFNVNAFDSQPNHYYAKLVPEAYG 179
VYF++ + + Y KLV A G
Sbjct: 185 VYFDLQSRGDR----YGKLVGVAPG 205
Score = 119 (46.9 bits), Expect = 1.2e-37, Sum P(3) = 1.2e-37
Identities = 22/39 (56%), Positives = 28/39 (71%)
Query: 435 SYITFDILRRILSEYFNYNITYAMNITDIDDKIIKRARQ 473
SY+ FDI+RRILS F + M ITD+DDKII+RA +
Sbjct: 85 SYVRFDIIRRILSRVFGCTVVMVMGITDVDDKIIRRANE 123
Score = 100 (40.3 bits), Expect = 1.2e-37, Sum P(3) = 1.2e-37
Identities = 19/37 (51%), Positives = 28/37 (75%)
Query: 625 ATLPKHWEAEFHKDMADLNVLPPTVLTRVSEYIPEIV 661
A+L + +E +F +DMA L VLPPT RV+E++P+IV
Sbjct: 129 ASLARLYEEDFKQDMAALKVLPPTAYLRVTEHVPQIV 165
Score = 90 (36.7 bits), Expect = 7.6e-09, Sum P(2) = 7.6e-09
Identities = 47/167 (28%), Positives = 76/167 (45%)
Query: 289 QADLELSTRFIQTKNNVHAALCDNMDTRSALDSIRDCISQVNIYLRGTPNQLL-LRD--- 344
Q D+ L R +TK V AAL D+ DT A+D++ D + N L+ + R
Sbjct: 383 QEDV-LWERLGRTKAAVQAALADDFDTVRAVDAVMDLVHHGNRQLKAASEEPRGPRSPAV 441
Query: 345 IGAYVTKILTVFGCIGD--VKNIGFPLGGTGVESTNL-EELVLPYLTILS------EFRD 395
+GA V + F +G + P G+ +L EELV L + E
Sbjct: 442 LGAVVASVEHFFETVGVSLAERQCVPGAGSPAALYSLVEELVRFRLKVRQFALASGEAPG 501
Query: 396 NIRTEARLIKSTEILNQCDRLRDEVLPNVGVRLEDIEGKSYITFDIL 442
R + RL++ +L CD LR ++ + G+ ++D G S T+++L
Sbjct: 502 EARRQ-RLLERQPLLEACDALRRDLAVH-GISIKDRSGSS--TWELL 544
Score = 40 (19.1 bits), Expect = 2.1e-31, Sum P(3) = 2.1e-31
Identities = 9/21 (42%), Positives = 14/21 (66%)
Query: 578 ATLPKHWEAEFHKDMADLNKL 598
A+L + +E +F +DMA L L
Sbjct: 129 ASLARLYEEDFKQDMAALKVL 149
>GENEDB_PFALCIPARUM|PF10_0149 [details] [associations]
symbol:PF10_0149 "cysteine --tRNA ligase,
putative" species:5833 "Plasmodium falciparum" [GO:0006414
"translational elongation" evidence=ISS] [GO:0020011 "apicoplast"
evidence=ISS] HAMAP:MF_00041 InterPro:IPR009080 InterPro:IPR015803
Pfam:PF01406 GO:GO:0005524 Gene3D:3.40.50.620 InterPro:IPR014729
EMBL:AE014185 SUPFAM:SSF47323 GO:GO:0020011 GO:GO:0006414
InterPro:IPR024909 PANTHER:PTHR10890 PRINTS:PR00983 GO:GO:0004817
GO:GO:0006423 HOGENOM:HOG000245252 KO:K01883 TIGRFAMs:TIGR00435
ProtClustDB:PTZ00399 RefSeq:XP_001347434.2
ProteinModelPortal:Q8IJP3 PRIDE:Q8IJP3
EnsemblProtists:PF10_0149:mRNA GeneID:810307 KEGG:pfa:PF10_0149
EuPathDB:PlasmoDB:PF3D7_1015200.1 Uniprot:Q8IJP3
Length = 677
Score = 312 (114.9 bits), Expect = 4.1e-37, Sum P(2) = 4.1e-37
Identities = 55/86 (63%), Positives = 65/86 (75%)
Query: 778 GDLSSQEASEKRSPNDFALWKKSKAGEPWWSSPWGEGRPGWHIECSVMASAVLGPQLDIH 837
GDL + +K++ DFALWK SK EP W SPWG+GRPGWHIECS MAS +LG LDIH
Sbjct: 282 GDLGVI-SKKKKNAYDFALWKSSKPNEPHWDSPWGKGRPGWHIECSTMASNILGDVLDIH 340
Query: 838 TGGVDLKFPHHDNELAQAEGLPTHDQ 863
+GG+DL+FPHHDNELAQ+E H Q
Sbjct: 341 SGGIDLRFPHHDNELAQSEAFFDHSQ 366
Score = 167 (63.8 bits), Expect = 4.1e-37, Sum P(2) = 4.1e-37
Identities = 36/72 (50%), Positives = 47/72 (65%)
Query: 118 VLPPTVLTRVSEYIPEIVASYIEKIIANGLAYESN-GSVYFNVNAFDSQPNHYYAKLVPE 176
VL PT +TRVSEY+ +IV YIEKII N AY S GSVYF+++ F H+YA++ P
Sbjct: 211 VLLPTAITRVSEYVGDIV-KYIEKIIENKYAYVSEEGSVYFDIDEFKKSEKHFYARMEPL 269
Query: 177 AYGDTKTLQEGE 188
+ D + EGE
Sbjct: 270 SVKDENKILEGE 281
Score = 147 (56.8 bits), Expect = 5.9e-19, Sum P(2) = 5.9e-19
Identities = 50/169 (29%), Positives = 84/169 (49%)
Query: 252 QSLKLVVIMKEFFLNVKDHIRNLKFPATTVSSFEKWTQADLELSTRFIQTKNNVHAALCD 311
Q +++ FF + I+N F + + + W+ AD +L+ F QTKN +H D
Sbjct: 430 QCIEIDKSFTNFFAIILMKIKN--FDLNSCNLY--WSDADNKLNLLFRQTKNKIHEHFLD 485
Query: 312 NMDTRSALDSIRDCISQVNIYLRGTPNQL-LLRDIGAYVTKILTVFGCI-GDVKNIGFPL 369
N +T AL +I+ I+++NIY+ Q+ LL +I Y+ I FG I GD P
Sbjct: 486 NFNTPDALLAIQKLITEINIYMDKEKIQIGLLLEIKHYINFIFDTFGLIYGDA-----PK 540
Query: 370 GGTGVESTNLEELVLPYLTILSEFRDNIRTEARLIKSTEILNQCDRLRD 418
G + +EL+ T R N+++ A+LI++ IL + ++ D
Sbjct: 541 G----KYDKFDELLQTLGTYRRNIRINLQSNAKLIRN--ILKEKNKKND 583
Score = 131 (51.2 bits), Expect = 6.1e-36, Sum P(3) = 6.1e-36
Identities = 23/38 (60%), Positives = 32/38 (84%)
Query: 434 KSYITFDILRRILSEYFNYNITYAMNITDIDDKIIKRA 471
++Y++FDI+RRIL YF Y++ +NITDIDDKIIKR+
Sbjct: 147 RTYVSFDIIRRILVNYFKYDVFMVINITDIDDKIIKRS 184
Score = 119 (46.9 bits), Expect = 4.4e-32, Sum P(2) = 4.4e-32
Identities = 25/56 (44%), Positives = 35/56 (62%)
Query: 606 LSDWLDSLHGSSITDNSIFATLPKHWEAEFHKDMADLNVLPPTVLTRVSEYIPEIV 661
++D D + S+ + F L + WE EF +DM LNVL PT +TRVSEY+ +IV
Sbjct: 173 ITDIDDKIIKRSVEEKIGFTELARKWEYEFWEDMKSLNVLLPTAITRVSEYVGDIV 228
Score = 72 (30.4 bits), Expect = 3.6e-11, Sum P(2) = 3.6e-11
Identities = 16/47 (34%), Positives = 27/47 (57%)
Query: 391 SEFRDNIRTEARLIKSTEILNQCDRLRDEVLPNVGVRLEDIEGKSYI 437
SEF +NI+ L+ L +CD LRD+ L N+G+ ++D ++
Sbjct: 598 SEFINNIKANNELL-----LKECDLLRDQHLLNMGILIDDRPNNEFV 639
Score = 67 (28.6 bits), Expect = 6.1e-36, Sum P(3) = 6.1e-36
Identities = 15/50 (30%), Positives = 25/50 (50%)
Query: 564 DSLHGSSITDNSIFATLPKHWEAEFHKDMADLNKLLTAVRDPLSDWLDSL 613
D + S+ + F L + WE EF +DM LN LL +S+++ +
Sbjct: 178 DKIIKRSVEEKIGFTELARKWEYEFWEDMKSLNVLLPTAITRVSEYVGDI 227
Score = 44 (20.5 bits), Expect = 2.8e-08, Sum P(2) = 2.8e-08
Identities = 14/51 (27%), Positives = 23/51 (45%)
Query: 389 ILSEFRDNIRTEARLIKSTEILNQCDRLRDEVLPNVGVRLEDIEGKSYITF 439
I F DN T L+ +++ + + D+ +G+ LE K YI F
Sbjct: 479 IHEHFLDNFNTPDALLAIQKLITEINIYMDKEKIQIGLLLEI---KHYINF 526
>UNIPROTKB|Q8IJP3 [details] [associations]
symbol:PF10_0149 "Cysteinyl-tRNA synthetase, putative"
species:36329 "Plasmodium falciparum 3D7" [GO:0006414
"translational elongation" evidence=ISS] [GO:0020011 "apicoplast"
evidence=ISS] HAMAP:MF_00041 InterPro:IPR009080 InterPro:IPR015803
Pfam:PF01406 GO:GO:0005524 Gene3D:3.40.50.620 InterPro:IPR014729
EMBL:AE014185 SUPFAM:SSF47323 GO:GO:0020011 GO:GO:0006414
InterPro:IPR024909 PANTHER:PTHR10890 PRINTS:PR00983 GO:GO:0004817
GO:GO:0006423 HOGENOM:HOG000245252 KO:K01883 TIGRFAMs:TIGR00435
ProtClustDB:PTZ00399 RefSeq:XP_001347434.2
ProteinModelPortal:Q8IJP3 PRIDE:Q8IJP3
EnsemblProtists:PF10_0149:mRNA GeneID:810307 KEGG:pfa:PF10_0149
EuPathDB:PlasmoDB:PF3D7_1015200.1 Uniprot:Q8IJP3
Length = 677
Score = 312 (114.9 bits), Expect = 4.1e-37, Sum P(2) = 4.1e-37
Identities = 55/86 (63%), Positives = 65/86 (75%)
Query: 778 GDLSSQEASEKRSPNDFALWKKSKAGEPWWSSPWGEGRPGWHIECSVMASAVLGPQLDIH 837
GDL + +K++ DFALWK SK EP W SPWG+GRPGWHIECS MAS +LG LDIH
Sbjct: 282 GDLGVI-SKKKKNAYDFALWKSSKPNEPHWDSPWGKGRPGWHIECSTMASNILGDVLDIH 340
Query: 838 TGGVDLKFPHHDNELAQAEGLPTHDQ 863
+GG+DL+FPHHDNELAQ+E H Q
Sbjct: 341 SGGIDLRFPHHDNELAQSEAFFDHSQ 366
Score = 167 (63.8 bits), Expect = 4.1e-37, Sum P(2) = 4.1e-37
Identities = 36/72 (50%), Positives = 47/72 (65%)
Query: 118 VLPPTVLTRVSEYIPEIVASYIEKIIANGLAYESN-GSVYFNVNAFDSQPNHYYAKLVPE 176
VL PT +TRVSEY+ +IV YIEKII N AY S GSVYF+++ F H+YA++ P
Sbjct: 211 VLLPTAITRVSEYVGDIV-KYIEKIIENKYAYVSEEGSVYFDIDEFKKSEKHFYARMEPL 269
Query: 177 AYGDTKTLQEGE 188
+ D + EGE
Sbjct: 270 SVKDENKILEGE 281
Score = 147 (56.8 bits), Expect = 5.9e-19, Sum P(2) = 5.9e-19
Identities = 50/169 (29%), Positives = 84/169 (49%)
Query: 252 QSLKLVVIMKEFFLNVKDHIRNLKFPATTVSSFEKWTQADLELSTRFIQTKNNVHAALCD 311
Q +++ FF + I+N F + + + W+ AD +L+ F QTKN +H D
Sbjct: 430 QCIEIDKSFTNFFAIILMKIKN--FDLNSCNLY--WSDADNKLNLLFRQTKNKIHEHFLD 485
Query: 312 NMDTRSALDSIRDCISQVNIYLRGTPNQL-LLRDIGAYVTKILTVFGCI-GDVKNIGFPL 369
N +T AL +I+ I+++NIY+ Q+ LL +I Y+ I FG I GD P
Sbjct: 486 NFNTPDALLAIQKLITEINIYMDKEKIQIGLLLEIKHYINFIFDTFGLIYGDA-----PK 540
Query: 370 GGTGVESTNLEELVLPYLTILSEFRDNIRTEARLIKSTEILNQCDRLRD 418
G + +EL+ T R N+++ A+LI++ IL + ++ D
Sbjct: 541 G----KYDKFDELLQTLGTYRRNIRINLQSNAKLIRN--ILKEKNKKND 583
Score = 131 (51.2 bits), Expect = 6.1e-36, Sum P(3) = 6.1e-36
Identities = 23/38 (60%), Positives = 32/38 (84%)
Query: 434 KSYITFDILRRILSEYFNYNITYAMNITDIDDKIIKRA 471
++Y++FDI+RRIL YF Y++ +NITDIDDKIIKR+
Sbjct: 147 RTYVSFDIIRRILVNYFKYDVFMVINITDIDDKIIKRS 184
Score = 119 (46.9 bits), Expect = 4.4e-32, Sum P(2) = 4.4e-32
Identities = 25/56 (44%), Positives = 35/56 (62%)
Query: 606 LSDWLDSLHGSSITDNSIFATLPKHWEAEFHKDMADLNVLPPTVLTRVSEYIPEIV 661
++D D + S+ + F L + WE EF +DM LNVL PT +TRVSEY+ +IV
Sbjct: 173 ITDIDDKIIKRSVEEKIGFTELARKWEYEFWEDMKSLNVLLPTAITRVSEYVGDIV 228
Score = 72 (30.4 bits), Expect = 3.6e-11, Sum P(2) = 3.6e-11
Identities = 16/47 (34%), Positives = 27/47 (57%)
Query: 391 SEFRDNIRTEARLIKSTEILNQCDRLRDEVLPNVGVRLEDIEGKSYI 437
SEF +NI+ L+ L +CD LRD+ L N+G+ ++D ++
Sbjct: 598 SEFINNIKANNELL-----LKECDLLRDQHLLNMGILIDDRPNNEFV 639
Score = 67 (28.6 bits), Expect = 6.1e-36, Sum P(3) = 6.1e-36
Identities = 15/50 (30%), Positives = 25/50 (50%)
Query: 564 DSLHGSSITDNSIFATLPKHWEAEFHKDMADLNKLLTAVRDPLSDWLDSL 613
D + S+ + F L + WE EF +DM LN LL +S+++ +
Sbjct: 178 DKIIKRSVEEKIGFTELARKWEYEFWEDMKSLNVLLPTAITRVSEYVGDI 227
Score = 44 (20.5 bits), Expect = 2.8e-08, Sum P(2) = 2.8e-08
Identities = 14/51 (27%), Positives = 23/51 (45%)
Query: 389 ILSEFRDNIRTEARLIKSTEILNQCDRLRDEVLPNVGVRLEDIEGKSYITF 439
I F DN T L+ +++ + + D+ +G+ LE K YI F
Sbjct: 479 IHEHFLDNFNTPDALLAIQKLITEINIYMDKEKIQIGLLLEI---KHYINF 526
>UNIPROTKB|Q6DJ95 [details] [associations]
symbol:cars2 "Probable cysteine--tRNA ligase,
mitochondrial" species:8364 "Xenopus (Silurana) tropicalis"
[GO:0004817 "cysteine-tRNA ligase activity" evidence=ISS]
[GO:0005829 "cytosol" evidence=ISS] [GO:0006423 "cysteinyl-tRNA
aminoacylation" evidence=ISS] InterPro:IPR009080 InterPro:IPR015273
InterPro:IPR015803 Pfam:PF09190 PROSITE:PS00178 Pfam:PF01406
GO:GO:0005829 GO:GO:0005524 GO:GO:0005759 GO:GO:0046872
Gene3D:3.40.50.620 InterPro:IPR014729 SUPFAM:SSF47323
eggNOG:COG0215 InterPro:IPR024909 PANTHER:PTHR10890 PRINTS:PR00983
GO:GO:0004817 GO:GO:0006423 HSSP:P21888 TIGRFAMs:TIGR00435
HOGENOM:HOG000245250 HOVERGEN:HBG094012 OrthoDB:EOG4B8JCV
EMBL:BC075287 UniGene:Str.33171 ProteinModelPortal:Q6DJ95
STRING:Q6DJ95 Xenbase:XB-GENE-976543 InParanoid:Q6DJ95
Uniprot:Q6DJ95
Length = 572
Score = 308 (113.5 bits), Expect = 5.6e-37, Sum P(3) = 5.6e-37
Identities = 53/79 (67%), Positives = 64/79 (81%)
Query: 779 DLSSQEASE-KRSPNDFALWKKSKAGEPWWSSPWGEGRPGWHIECSVMASAVLGPQLDIH 837
D +S+ AS+ KR DFALWK SK EP+W+SPWG+GRPGWHIECS +AS+V G LDIH
Sbjct: 216 DTASESASQDKRHIRDFALWKTSKPEEPYWASPWGKGRPGWHIECSTIASSVFGKHLDIH 275
Query: 838 TGGVDLKFPHHDNELAQAE 856
TGG+DL FPHH+NE+AQ E
Sbjct: 276 TGGIDLAFPHHENEIAQCE 294
Score = 129 (50.5 bits), Expect = 4.0e-33, Sum P(2) = 4.0e-33
Identities = 32/65 (49%), Positives = 43/65 (66%)
Query: 118 VLPPTVLTRVSEYIPEIVASYIEKIIANGLAYE-SNGSVYFNVNAFDSQPNHYYAKLVPE 176
VLPPTV RV+E IP+I+ S+IE IIANG AY S G+VYF+V + + Y K +
Sbjct: 159 VLPPTVYMRVTENIPQII-SFIEHIIANGYAYATSQGNVYFDVQSIGER----YGKF-ND 212
Query: 177 AYGDT 181
++ DT
Sbjct: 213 SFSDT 217
Score = 114 (45.2 bits), Expect = 5.6e-37, Sum P(3) = 5.6e-37
Identities = 22/39 (56%), Positives = 29/39 (74%)
Query: 435 SYITFDILRRILSEYFNYNITYAMNITDIDDKIIKRARQ 473
SY+ FDI+RRIL + F + M +TDIDDKIIKRA++
Sbjct: 96 SYVRFDIIRRILLKVFGIDTVVVMVVTDIDDKIIKRAKE 134
Score = 92 (37.4 bits), Expect = 5.6e-37, Sum P(3) = 5.6e-37
Identities = 18/35 (51%), Positives = 25/35 (71%)
Query: 627 LPKHWEAEFHKDMADLNVLPPTVLTRVSEYIPEIV 661
L + +E +F +DM L VLPPTV RV+E IP+I+
Sbjct: 142 LARTYEQDFKQDMTALKVLPPTVYMRVTENIPQII 176
Score = 70 (29.7 bits), Expect = 4.5e-07, Sum P(2) = 4.5e-07
Identities = 16/43 (37%), Positives = 23/43 (53%)
Query: 297 RFIQTKNNVHAALCDNMDTRSALDSIRDCISQVNIYLRGTPNQ 339
R +TK NV AA D+ DT A+D++ D I N L+ +
Sbjct: 401 RLNETKVNVKAAFSDDFDTPRAVDAVMDLIHHGNRQLKAVSKE 443
>UNIPROTKB|Q9HA77 [details] [associations]
symbol:CARS2 "Probable cysteine--tRNA ligase,
mitochondrial" species:9606 "Homo sapiens" [GO:0005524 "ATP
binding" evidence=IEA] [GO:0046872 "metal ion binding"
evidence=IEA] [GO:0005759 "mitochondrial matrix" evidence=IEA]
[GO:0004817 "cysteine-tRNA ligase activity" evidence=IBA]
[GO:0005829 "cytosol" evidence=IBA] [GO:0006423 "cysteinyl-tRNA
aminoacylation" evidence=IBA] [GO:0006418 "tRNA aminoacylation for
protein translation" evidence=TAS] [GO:0010467 "gene expression"
evidence=TAS] Reactome:REACT_71 InterPro:IPR009080
InterPro:IPR015803 PROSITE:PS00178 Pfam:PF01406 GO:GO:0005829
GO:GO:0005524 GO:GO:0005759 GO:GO:0046872 DrugBank:DB00151
Gene3D:3.40.50.620 InterPro:IPR014729 EMBL:AL139385 SUPFAM:SSF47323
EMBL:AL157820 UniGene:Hs.508725 eggNOG:COG0215 InterPro:IPR024909
PANTHER:PTHR10890 PRINTS:PR00983 GO:GO:0004817 GO:GO:0006423
HSSP:P21888 KO:K01883 TIGRFAMs:TIGR00435 CTD:79587
HOGENOM:HOG000245250 HOVERGEN:HBG094012 OrthoDB:EOG4B8JCV
EMBL:AK022180 EMBL:BC007220 EMBL:AB062436 IPI:IPI00336016
RefSeq:NP_078813.1 ProteinModelPortal:Q9HA77 SMR:Q9HA77
IntAct:Q9HA77 STRING:Q9HA77 PhosphoSite:Q9HA77 DMDM:74761587
PaxDb:Q9HA77 PeptideAtlas:Q9HA77 PRIDE:Q9HA77
Ensembl:ENST00000257347 GeneID:79587 KEGG:hsa:79587 UCSC:uc001vrd.2
GeneCards:GC13M111293 HGNC:HGNC:25695 MIM:612800 neXtProt:NX_Q9HA77
PharmGKB:PA162381083 InParanoid:Q9HA77 OMA:IMVMGIT PhylomeDB:Q9HA77
ChiTaRS:CARS2 GenomeRNAi:79587 NextBio:68590 ArrayExpress:Q9HA77
Bgee:Q9HA77 CleanEx:HS_CARS2 Genevestigator:Q9HA77
GermOnline:ENSG00000134905 Uniprot:Q9HA77
Length = 564
Score = 290 (107.1 bits), Expect = 2.4e-36, Sum P(3) = 2.4e-36
Identities = 49/79 (62%), Positives = 60/79 (75%)
Query: 778 GDLSSQEASEKRSPNDFALWKKSKAGEPWWSSPWGEGRPGWHIECSVMASAVLGPQLDIH 837
G + S+KR +DFALWK +K E +W+SPWG GRPGWHIECS +AS V G QLDIH
Sbjct: 213 GPVGEPADSDKRHASDFALWKAAKPQEVFWASPWGPGRPGWHIECSAIASMVFGSQLDIH 272
Query: 838 TGGVDLKFPHHDNELAQAE 856
+GG+DL FPHH+NE+AQ E
Sbjct: 273 SGGIDLAFPHHENEIAQCE 291
Score = 122 (48.0 bits), Expect = 2.4e-36, Sum P(3) = 2.4e-36
Identities = 23/39 (58%), Positives = 30/39 (76%)
Query: 435 SYITFDILRRILSEYFNYNITYAMNITDIDDKIIKRARQ 473
SY+ FDI+RRIL++ F +I M ITD+DDKIIKRA +
Sbjct: 93 SYVRFDIIRRILTKVFGCSIVMVMGITDVDDKIIKRANE 131
Score = 119 (46.9 bits), Expect = 3.2e-06, Sum P(2) = 3.2e-06
Identities = 40/127 (31%), Positives = 61/127 (48%)
Query: 98 IPPSEMFKMETDKYSQFDET--VLPPTVLTRVSEYIPEIVASYIEKIIANGLAYES-NGS 154
I P+ + + + + Q VLPPTV RV+E IP+I+ S+IE IIA G AY + G+
Sbjct: 134 ISPASLASLYEEDFKQDMAALKVLPPTVYLRVTENIPQII-SFIEGIIARGNAYSTAKGN 192
Query: 155 VYFNVNAFDSQPNHYYAKLV---PEAYGDTKTLQEGEVRGYPPW----PARIEGLADETP 207
VYF++ + + Y KLV P G+ + + W P + + P
Sbjct: 193 VYFDLKSRGDK----YGKLVGVVPGPVGEPADSDKRHASDFALWKAAKPQEVFWASPWGP 248
Query: 208 NRLKYHI 214
R +HI
Sbjct: 249 GRPGWHI 255
Score = 98 (39.6 bits), Expect = 2.4e-36, Sum P(3) = 2.4e-36
Identities = 20/37 (54%), Positives = 27/37 (72%)
Query: 625 ATLPKHWEAEFHKDMADLNVLPPTVLTRVSEYIPEIV 661
A+L +E +F +DMA L VLPPTV RV+E IP+I+
Sbjct: 137 ASLASLYEEDFKQDMAALKVLPPTVYLRVTENIPQII 173
Score = 72 (30.4 bits), Expect = 3.2e-06, Sum P(2) = 3.2e-06
Identities = 40/160 (25%), Positives = 71/160 (44%)
Query: 297 RFIQTKNNVHAALCDNMDTRSALDSIRDCISQVNIYLRGT---PNQLLLRDI-GAYVTKI 352
R TK V AAL D+ DT +D+I N LR + P + GA ++
Sbjct: 398 RLSSTKRAVKAALADDFDTPRVVDAILGLAHHGNGQLRASLKEPEGPRSPAVFGAIISYF 457
Query: 353 LTVFGCIG-DVKNIGFPLGGTGVESTN---LEELVL------PYLTILSEFRDNIRTEAR 402
F +G + N + + G G E+T ++ELV + + E + R + +
Sbjct: 458 EQFFETVGISLANQQY-VSGDGSEATLHGVVDELVRFRQKVRQFALAMPEATGDARRQ-Q 515
Query: 403 LIKSTEILNQCDRLRDEVLPNVGVRLEDIEGKSYITFDIL 442
L++ +L CD LR + + G+ ++D + T+++L
Sbjct: 516 LLERQPLLEACDTLRRGLTAH-GINIKD-RSSTTSTWELL 553
Score = 38 (18.4 bits), Expect = 4.0e-30, Sum P(3) = 4.0e-30
Identities = 9/21 (42%), Positives = 13/21 (61%)
Query: 578 ATLPKHWEAEFHKDMADLNKL 598
A+L +E +F +DMA L L
Sbjct: 137 ASLASLYEEDFKQDMAALKVL 157
>TIGR_CMR|CBU_1487 [details] [associations]
symbol:CBU_1487 "cysteinyl-tRNA synthetase" species:227377
"Coxiella burnetii RSA 493" [GO:0004817 "cysteine-tRNA ligase
activity" evidence=ISS] [GO:0006423 "cysteinyl-tRNA aminoacylation"
evidence=ISS] HAMAP:MF_00041 InterPro:IPR009080 InterPro:IPR015273
InterPro:IPR015803 Pfam:PF09190 PROSITE:PS00178 SMART:SM00840
Pfam:PF01406 GO:GO:0005524 GO:GO:0005737 GO:GO:0046872
EMBL:AE016828 GenomeReviews:AE016828_GR Gene3D:3.40.50.620
InterPro:IPR014729 SUPFAM:SSF47323 eggNOG:COG0215
InterPro:IPR024909 PANTHER:PTHR10890 PRINTS:PR00983 GO:GO:0004817
GO:GO:0006423 KO:K01883 TIGRFAMs:TIGR00435 HOGENOM:HOG000245250
ProtClustDB:PRK00260 RefSeq:NP_820470.2 PDB:3TQO PDBsum:3TQO
ProteinModelPortal:Q83BL7 PRIDE:Q83BL7 GeneID:1209397
KEGG:cbu:CBU_1487 PATRIC:17931737 OMA:MENGKAY
BioCyc:CBUR227377:GJ7S-1475-MONOMER EvolutionaryTrace:Q83BL7
Uniprot:Q83BL7
Length = 460
Score = 307 (113.1 bits), Expect = 9.3e-35, Sum P(3) = 9.3e-35
Identities = 52/74 (70%), Positives = 61/74 (82%)
Query: 784 EASE-KRSPNDFALWKKSKAGEPWWSSPWGEGRPGWHIECSVMASAVLGPQLDIHTGGVD 842
E S+ KR P DF LWKK+K GEP W SPWGEGRPGWHIECS M+S++LG DIH GG+D
Sbjct: 171 EVSDSKRDPLDFVLWKKAKPGEPKWDSPWGEGRPGWHIECSAMSSSILGQPFDIHGGGLD 230
Query: 843 LKFPHHDNELAQAE 856
LKFPHH+NE+AQ+E
Sbjct: 231 LKFPHHENEIAQSE 244
Score = 110 (43.8 bits), Expect = 9.3e-35, Sum P(3) = 9.3e-35
Identities = 23/42 (54%), Positives = 30/42 (71%)
Query: 433 GKSYITFDILRRILSEYFNYNITYAMNITDIDDKIIKRARQN 474
G+S+I FD++ R L Y +T+ NITDIDDKIIKRA +N
Sbjct: 42 GRSWIIFDMVVRYL-RMRGYEVTFVRNITDIDDKIIKRAGEN 82
Score = 86 (35.3 bits), Expect = 1.3e-29, Sum P(2) = 1.3e-29
Identities = 19/46 (41%), Positives = 28/46 (60%)
Query: 118 VLPPTVLTRVSEYIPEIVASYIEKIIANGLAYES-NGSVYFNVNAF 162
VL P R ++Y+PEI+ I+K++ N AY NG V+F+V F
Sbjct: 106 VLSPDQEPRATQYVPEII-KLIQKLLDNQYAYTGQNGDVFFDVRRF 150
Score = 60 (26.2 bits), Expect = 9.3e-35, Sum P(3) = 9.3e-35
Identities = 13/37 (35%), Positives = 20/37 (54%)
Query: 625 ATLPKHWEAEFHKDMADLNVLPPTVLTRVSEYIPEIV 661
A L + + H+D L VL P R ++Y+PEI+
Sbjct: 87 AALAERFIQILHEDEKALRVLSPDQEPRATQYVPEII 123
>ZFIN|ZDB-GENE-030131-5564 [details] [associations]
symbol:cars2 "cysteinyl-tRNA synthetase 2,
mitochondrial" species:7955 "Danio rerio" [GO:0004817
"cysteine-tRNA ligase activity" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0006418
"tRNA aminoacylation for protein translation" evidence=IEA]
[GO:0004812 "aminoacyl-tRNA ligase activity" evidence=IEA]
[GO:0006423 "cysteinyl-tRNA aminoacylation" evidence=IEA]
HAMAP:MF_00041 InterPro:IPR009080 InterPro:IPR015803 Pfam:PF01406
ZFIN:ZDB-GENE-030131-5564 GO:GO:0005524 GO:GO:0005737
Gene3D:3.40.50.620 InterPro:IPR014729 SUPFAM:SSF47323
InterPro:IPR024909 PANTHER:PTHR10890 PRINTS:PR00983 GO:GO:0004817
GO:GO:0006423 KO:K01883 TIGRFAMs:TIGR00435
GeneTree:ENSGT00390000006347 CTD:79587 EMBL:BX908780
IPI:IPI00900717 RefSeq:XP_682732.4 UniGene:Dr.80378
ProteinModelPortal:E7FC09 Ensembl:ENSDART00000113735 GeneID:555187
KEGG:dre:555187 NextBio:20880843 Bgee:E7FC09 Uniprot:E7FC09
Length = 566
Score = 305 (112.4 bits), Expect = 2.4e-33, Sum P(2) = 2.4e-33
Identities = 50/79 (63%), Positives = 62/79 (78%)
Query: 778 GDLSSQEASEKRSPNDFALWKKSKAGEPWWSSPWGEGRPGWHIECSVMASAVLGPQLDIH 837
G+ Q +K + DFALWK SK EP+W SPWG+GRPGWHIECS +AS+V G QLDIH
Sbjct: 214 GNAGEQGVQDKENSRDFALWKASKPFEPYWESPWGQGRPGWHIECSTIASSVFGHQLDIH 273
Query: 838 TGGVDLKFPHHDNELAQAE 856
+GG+DL FPHH+NE+AQ+E
Sbjct: 274 SGGIDLAFPHHENEIAQSE 292
Score = 134 (52.2 bits), Expect = 2.4e-33, Sum P(2) = 2.4e-33
Identities = 34/80 (42%), Positives = 48/80 (60%)
Query: 98 IPPSEMFKMETDKYSQ--FDETVLPPTVLTRVSEYIPEIVASYIEKIIANGLAY-ESNGS 154
I P + +M +++ + VLPP V RV+E IP+I+A +IE+II NG AY S G+
Sbjct: 136 ISPITLARMHEEEFKKDMLALRVLPPVVYMRVTENIPQIIA-FIERIIGNGHAYVTSQGN 194
Query: 155 VYFNVNAFDSQPNHYYAKLV 174
VYFN + +H Y KLV
Sbjct: 195 VYFNTKSI----SHRYGKLV 210
Score = 118 (46.6 bits), Expect = 1.2e-31, Sum P(2) = 1.2e-31
Identities = 23/37 (62%), Positives = 29/37 (78%)
Query: 435 SYITFDILRRILSEYFNYNITYAMNITDIDDKIIKRA 471
SY+ FDIL+RILS F N+ + M ITDIDDKII+R+
Sbjct: 95 SYVRFDILQRILSRLFGINVIHVMVITDIDDKIIQRS 131
Score = 102 (41.0 bits), Expect = 5.5e-30, Sum P(2) = 5.5e-30
Identities = 24/56 (42%), Positives = 33/56 (58%)
Query: 606 LSDWLDSLHGSSITDNSIFATLPKHWEAEFHKDMADLNVLPPTVLTRVSEYIPEIV 661
++D D + S+ +N TL + E EF KDM L VLPP V RV+E IP+I+
Sbjct: 120 ITDIDDKIIQRSLEENISPITLARMHEEEFKKDMLALRVLPPVVYMRVTENIPQII 175
Score = 86 (35.3 bits), Expect = 2.8e-09, Sum P(2) = 2.8e-09
Identities = 34/123 (27%), Positives = 58/123 (47%)
Query: 297 RFIQTKNNVHAALCDNMDTRSALDSIRDCISQVNIYLR------GTPNQLLLRDIGAYVT 350
R T+ +VH L D+ DT A+D+I I N L+ G + + I +YV
Sbjct: 399 RLSNTQTSVHKMLADDFDTPKAVDAIMSLIYHGNCQLQPATKVDGPRSPAVFGAIMSYVM 458
Query: 351 KILTVFGC-IGDVKNIGFPLGGTGVESTNLEELVLPYLTILSEFRDNIRTEARLIKSTEI 409
+I++VFG + D + +GV + +EELV + + + +F ++ +A T
Sbjct: 459 EIMSVFGVDLSDKTEVQV---SSGVLNNVVEELV-HFRSEVRKFALSVEDQAPQESQTGN 514
Query: 410 LNQ 412
NQ
Sbjct: 515 KNQ 517
Score = 49 (22.3 bits), Expect = 1.8e-05, Sum P(2) = 1.8e-05
Identities = 29/124 (23%), Positives = 55/124 (44%)
Query: 324 DCISQVNIYLRGTPNQLLLRDIGAYVTKILTVFGC-IGDVKNIGFPLGGTGVESTNLEEL 382
+C Q + G + + I +YV +I++VFG + D + +GV + +EEL
Sbjct: 432 NCQLQPATKVDGPRSPAVFGAIMSYVMEIMSVFGVDLSDKTEVQV---SSGVLNNVVEEL 488
Query: 383 VLPYLTILSEFRDNIRTEARLIKST----------------EILNQCDRLRDEVLPNVGV 426
V + + + +F ++ +A T +L CD LR+ + P +GV
Sbjct: 489 V-HFRSEVRKFALSVEDQAPQESQTGNKNQKRHHQPDRLHLSLLKACDALRNNLAP-LGV 546
Query: 427 RLED 430
++D
Sbjct: 547 HIKD 550
Score = 45 (20.9 bits), Expect = 5.1e-24, Sum P(2) = 5.1e-24
Identities = 13/35 (37%), Positives = 17/35 (48%)
Query: 564 DSLHGSSITDNSIFATLPKHWEAEFHKDMADLNKL 598
D + S+ +N TL + E EF KDM L L
Sbjct: 125 DKIIQRSLEENISPITLARMHEEEFKKDMLALRVL 159
>UNIPROTKB|Q7G2N5 [details] [associations]
symbol:LOC_Os10g32570 "tRNA synthetase class I family
protein, putative, expressed" species:39947 "Oryza sativa Japonica
Group" [GO:0004817 "cysteine-tRNA ligase activity" evidence=ISS]
[GO:0005739 "mitochondrion" evidence=ISS] [GO:0005829 "cytosol"
evidence=ISS] [GO:0006423 "cysteinyl-tRNA aminoacylation"
evidence=ISS] [GO:0009507 "chloroplast" evidence=ISS]
HAMAP:MF_00041 InterPro:IPR009080 InterPro:IPR015803 Pfam:PF01406
GO:GO:0005829 GO:GO:0005739 GO:GO:0005524 GO:GO:0009507
EMBL:DP000086 Gene3D:3.40.50.620 InterPro:IPR014729 SUPFAM:SSF47323
eggNOG:COG0215 InterPro:IPR024909 PANTHER:PTHR10890 PRINTS:PR00983
GO:GO:0004817 GO:GO:0006423 TIGRFAMs:TIGR00435 HOGENOM:HOG000245250
UniGene:Os.78553 ProteinModelPortal:Q7G2N5 STRING:Q7G2N5
Gramene:Q7G2N5 Uniprot:Q7G2N5
Length = 491
Score = 277 (102.6 bits), Expect = 2.6e-32, Sum P(3) = 2.6e-32
Identities = 47/71 (66%), Positives = 55/71 (77%)
Query: 786 SEKRSPNDFALWKKSKAGEPWWSSPWGEGRPGWHIECSVMASAVLGPQLDIHTGGVDLKF 845
+ KR+P DFALWK +K GEP W SPWG GRPGWHIECS M++ LG DIH GG DL F
Sbjct: 192 ARKRNPADFALWKSAKEGEPSWESPWGRGRPGWHIECSAMSAHYLGNIFDIHGGGKDLIF 251
Query: 846 PHHDNELAQAE 856
PHH+NELAQ++
Sbjct: 252 PHHENELAQSQ 262
Score = 114 (45.2 bits), Expect = 2.6e-32, Sum P(3) = 2.6e-32
Identities = 21/40 (52%), Positives = 28/40 (70%)
Query: 434 KSYITFDILRRILSEYFNYNITYAMNITDIDDKIIKRARQ 473
++Y+ FD+L R L +Y Y + Y N TDIDDKIIKRA +
Sbjct: 62 RAYVAFDVLFRYL-KYLGYEVNYVRNFTDIDDKIIKRANE 100
Score = 93 (37.8 bits), Expect = 2.9e-26, Sum P(2) = 2.9e-26
Identities = 21/44 (47%), Positives = 29/44 (65%)
Query: 119 LPPTVLTRVSEYIPEIVASYIEKIIANGLAYESNGSVYFNVNAF 162
LPPT RV+++I +I+ I KI+ NG AY G VYF+V+ F
Sbjct: 126 LPPTHEPRVTKHIEQII-DLITKIMDNGKAYTIEGDVYFSVDNF 168
Score = 76 (31.8 bits), Expect = 2.6e-32, Sum P(3) = 2.6e-32
Identities = 14/28 (50%), Positives = 21/28 (75%)
Query: 634 EFHKDMADLNVLPPTVLTRVSEYIPEIV 661
EFH+DM +L LPPT RV+++I +I+
Sbjct: 115 EFHRDMYELQCLPPTHEPRVTKHIEQII 142
Score = 38 (18.4 bits), Expect = 2.2e-28, Sum P(3) = 2.2e-28
Identities = 8/19 (42%), Positives = 12/19 (63%)
Query: 587 EFHKDMADLNKLLTAVRDP 605
EFH+DM +L + L +P
Sbjct: 115 EFHRDMYEL-QCLPPTHEP 132
>UNIPROTKB|A9WD90 [details] [associations]
symbol:cysS "Cysteine--tRNA ligase" species:324602
"Chloroflexus aurantiacus J-10-fl" [GO:0004817 "cysteine-tRNA
ligase activity" evidence=ISS] [GO:0005829 "cytosol" evidence=ISS]
[GO:0006423 "cysteinyl-tRNA aminoacylation" evidence=ISS]
HAMAP:MF_00041 InterPro:IPR009080 InterPro:IPR015273
InterPro:IPR015803 Pfam:PF09190 SMART:SM00840 Pfam:PF01406
GO:GO:0005829 GO:GO:0005524 GO:GO:0046872 GO:GO:0008270
Gene3D:3.40.50.620 InterPro:IPR014729 EMBL:CP000909
GenomeReviews:CP000909_GR SUPFAM:SSF47323 eggNOG:COG0215
InterPro:IPR024909 PANTHER:PTHR10890 PRINTS:PR00983 GO:GO:0004817
GO:GO:0006423 KO:K01883 TIGRFAMs:TIGR00435 HOGENOM:HOG000245250
OMA:IMVMGIT ProtClustDB:PRK00260 RefSeq:YP_001635446.1
ProteinModelPortal:A9WD90 STRING:A9WD90 GeneID:5826290
KEGG:cau:Caur_1840 PATRIC:21414671
BioCyc:CAUR324602:GIXU-1865-MONOMER Uniprot:A9WD90
Length = 472
Score = 295 (108.9 bits), Expect = 5.8e-32, Sum P(3) = 5.8e-32
Identities = 50/71 (70%), Positives = 56/71 (78%)
Query: 788 KRSPNDFALWKKSKAGEPWWSSPWGEGRPGWHIECSVMASAVLGPQLDIHTGGVDLKFPH 847
K SP DFALWK ++ GEP W SPWG GRPGWHIECS MA LGPQ+DIH GG DL FPH
Sbjct: 175 KESPADFALWKAARPGEPSWESPWGPGRPGWHIECSAMAMEHLGPQIDIHGGGTDLIFPH 234
Query: 848 HDNELAQAEGL 858
H+NE+AQ+E L
Sbjct: 235 HENEIAQSESL 245
Score = 96 (38.9 bits), Expect = 5.8e-32, Sum P(3) = 5.8e-32
Identities = 19/37 (51%), Positives = 26/37 (70%)
Query: 435 SYITFDILRRILSEYFNYNITYAMNITDIDDKIIKRA 471
S I FD++RR L E+ Y + + +N TDIDDK+I RA
Sbjct: 44 SAIVFDVIRRYL-EFRGYEVRHIVNFTDIDDKVIARA 79
Score = 87 (35.7 bits), Expect = 5.7e-28, Sum P(2) = 5.7e-28
Identities = 19/42 (45%), Positives = 26/42 (61%)
Query: 118 VLPPTVLTRVSEYIPEIVASYIEKIIANGLAYESNGSVYFNV 159
VLP T RVS +P I+A +++ +I G AY +G VYF V
Sbjct: 106 VLPATAYPRVSTTMPAIIA-FVQGLIERGYAYVVDGDVYFRV 146
Score = 66 (28.3 bits), Expect = 5.8e-32, Sum P(3) = 5.8e-32
Identities = 15/36 (41%), Positives = 20/36 (55%)
Query: 626 TLPKHWEAEFHKDMADLNVLPPTVLTRVSEYIPEIV 661
TL + AEF + +NVLP T RVS +P I+
Sbjct: 88 TLSGQYAAEFLAQLQAMNVLPATAYPRVSTTMPAII 123
>UNIPROTKB|F1PXG3 [details] [associations]
symbol:CARS2 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0006423 "cysteinyl-tRNA aminoacylation"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] [GO:0004817 "cysteine-tRNA ligase
activity" evidence=IEA] InterPro:IPR009080 InterPro:IPR015273
InterPro:IPR015803 Pfam:PF09190 SMART:SM00840 Pfam:PF01406
GO:GO:0005524 GO:GO:0005737 Gene3D:3.40.50.620 InterPro:IPR014729
SUPFAM:SSF47323 InterPro:IPR024909 PANTHER:PTHR10890 PRINTS:PR00983
GO:GO:0004817 GO:GO:0006423 TIGRFAMs:TIGR00435
GeneTree:ENSGT00390000006347 EMBL:AAEX03013387
Ensembl:ENSCAFT00000036703 Uniprot:F1PXG3
Length = 450
Score = 292 (107.8 bits), Expect = 1.1e-31, Sum P(3) = 1.1e-31
Identities = 50/79 (63%), Positives = 61/79 (77%)
Query: 778 GDLSSQEASEKRSPNDFALWKKSKAGEPWWSSPWGEGRPGWHIECSVMASAVLGPQLDIH 837
G L S+KR +DFALWK +K E +W+SPWG+GRPGWHIECS ++S V G QLDIH
Sbjct: 100 GPLGEPVDSDKRHASDFALWKAAKPQEVFWASPWGKGRPGWHIECSTISSLVFGSQLDIH 159
Query: 838 TGGVDLKFPHHDNELAQAE 856
+GGVDL FPHH+NE+AQ E
Sbjct: 160 SGGVDLAFPHHENEIAQCE 178
Score = 125 (49.1 bits), Expect = 3.5e-08, Sum P(2) = 3.5e-08
Identities = 36/106 (33%), Positives = 56/106 (52%)
Query: 98 IPPSEMFKMETDKYSQFDET--VLPPTVLTRVSEYIPEIVASYIEKIIANGLAYES-NGS 154
+ P+ + + +++ Q VLPPTV RV+E IP+I+ S+IE IIANG AY + G+
Sbjct: 21 VSPASLANLYEEEFKQDMAALKVLPPTVYVRVTETIPQII-SFIEGIIANGHAYSTAQGN 79
Query: 155 VYFNVNAFDSQPNHYYAKLV---PEAYGDTKTLQEGEVRGYPPWPA 197
VYF++ + + Y KLV P G+ + + W A
Sbjct: 80 VYFDLQSRGDK----YGKLVGVVPGPLGEPVDSDKRHASDFALWKA 121
Score = 102 (41.0 bits), Expect = 1.1e-31, Sum P(3) = 1.1e-31
Identities = 21/37 (56%), Positives = 27/37 (72%)
Query: 625 ATLPKHWEAEFHKDMADLNVLPPTVLTRVSEYIPEIV 661
A+L +E EF +DMA L VLPPTV RV+E IP+I+
Sbjct: 24 ASLANLYEEEFKQDMAALKVLPPTVYVRVTETIPQII 60
Score = 82 (33.9 bits), Expect = 3.5e-08, Sum P(2) = 3.5e-08
Identities = 38/159 (23%), Positives = 69/159 (43%)
Query: 297 RFIQTKNNVHAALCDNMDTRSALDSIRDCISQVNIYLR------GTPNQ-LLLRDIGAYV 349
R T+ V AAL D+ +T +A+D+I D I N L+ G P + I +Y+
Sbjct: 285 RLCHTQEAVKAALADDFNTPAAVDAIMDLIHHGNRQLKARTKEPGGPRSPAVFGSIVSYI 344
Query: 350 TKILTVFGC-IGDVKNIGFPLGGTGVESTNLEELV-----LPYLTILSEFRDNIRTEARL 403
+ G + D + + + S +EELV + + +E +L
Sbjct: 345 KQFFETVGISLADRQLVSEDSSRATLHSV-VEELVRFRLKVRQFALATEAATREAGRQQL 403
Query: 404 IKSTEILNQCDRLRDEVLPNVGVRLEDIEGKSYITFDIL 442
+ +L CD LR ++ + G+ ++D S T+++L
Sbjct: 404 LDRRPLLEACDTLRQDLAAH-GISIKDRSSTS--TWELL 439
Score = 57 (25.1 bits), Expect = 1.1e-31, Sum P(3) = 1.1e-31
Identities = 11/16 (68%), Positives = 13/16 (81%)
Query: 458 MNITDIDDKIIKRARQ 473
M ITD+DDKII RA +
Sbjct: 3 MGITDVDDKIIHRASE 18
Score = 41 (19.5 bits), Expect = 2.2e-25, Sum P(3) = 2.2e-25
Identities = 10/21 (47%), Positives = 13/21 (61%)
Query: 578 ATLPKHWEAEFHKDMADLNKL 598
A+L +E EF +DMA L L
Sbjct: 24 ASLANLYEEEFKQDMAALKVL 44
>UNIPROTKB|Q9KQZ9 [details] [associations]
symbol:cysS "Cysteine--tRNA ligase" species:243277 "Vibrio
cholerae O1 biovar El Tor str. N16961" [GO:0004817 "cysteine-tRNA
ligase activity" evidence=ISS] [GO:0006423 "cysteinyl-tRNA
aminoacylation" evidence=ISS] HAMAP:MF_00041 InterPro:IPR009080
InterPro:IPR015273 InterPro:IPR015803 Pfam:PF09190 PROSITE:PS00178
SMART:SM00840 Pfam:PF01406 GO:GO:0005524 GO:GO:0005737
GO:GO:0046872 EMBL:AE003852 GenomeReviews:AE003852_GR
Gene3D:3.40.50.620 InterPro:IPR014729 SUPFAM:SSF47323
eggNOG:COG0215 InterPro:IPR024909 PANTHER:PTHR10890 PRINTS:PR00983
GO:GO:0004817 GO:GO:0006423 KO:K01883 TIGRFAMs:TIGR00435
OMA:DFDALNM ProtClustDB:PRK00260 PIR:A82150 RefSeq:NP_231482.1
ProteinModelPortal:Q9KQZ9 SMR:Q9KQZ9 PRIDE:Q9KQZ9 DNASU:2613602
GeneID:2613602 KEGG:vch:VC1848 PATRIC:20082738 Uniprot:Q9KQZ9
Length = 459
Score = 289 (106.8 bits), Expect = 1.4e-31, Sum P(2) = 1.4e-31
Identities = 50/72 (69%), Positives = 57/72 (79%)
Query: 784 EASEKRSPNDFALWKKSKAGEPWWSSPWGEGRPGWHIECSVMASAVLGPQLDIHTGGVDL 843
EA+ KRSP DF LWK SK GEP W SPWG GRPGWHIECS M S++LG DIH GG DL
Sbjct: 172 EAA-KRSPLDFVLWKMSKPGEPTWESPWGSGRPGWHIECSAMNSSILGTHFDIHGGGSDL 230
Query: 844 KFPHHDNELAQA 855
+FPHH+NE+AQ+
Sbjct: 231 QFPHHENEIAQS 242
Score = 127 (49.8 bits), Expect = 1.4e-31, Sum P(2) = 1.4e-31
Identities = 25/54 (46%), Positives = 38/54 (70%)
Query: 425 GVRLEDI----EGKSYITFDILRRILSEYFNYNITYAMNITDIDDKIIKRARQN 474
GV + D+ G+++++FD++ R L Y Y++T+ NITDIDDKIIKRA +N
Sbjct: 29 GVTIYDLCHIGHGRTFVSFDVVARYL-RYLGYDLTFVRNITDIDDKIIKRAAEN 81
Score = 89 (36.4 bits), Expect = 1.3e-27, Sum P(2) = 1.3e-27
Identities = 28/81 (34%), Positives = 40/81 (49%)
Query: 109 DKYSQFDE-TVLPPTVLTRVSEYIPEIVASYIEKIIANGLAYES-NGSVYFNVNAFDSQP 166
+ Y+ FD + P V R + YI EI+A +E++I G AY + NG V F V+ +
Sbjct: 95 EMYADFDALNIKRPDVEPRATAYIEEIIA-LVERLIERGFAYVADNGDVMFEVSQYSE-- 151
Query: 167 NHYYAKLVPEAYGDTKTLQEG 187
Y KL + D LQ G
Sbjct: 152 ---YGKLSKQ---DLDQLQAG 166
Score = 55 (24.4 bits), Expect = 4.8e-24, Sum P(2) = 4.8e-24
Identities = 18/63 (28%), Positives = 30/63 (47%)
Query: 599 LTAVRDPLSDWLDSLHGSSITDNSIFATLPKHWEAEFHKDMADLNVLPPTVLTRVSEYIP 658
LT VR+ ++D D + + + +L + E + D LN+ P V R + YI
Sbjct: 61 LTFVRN-ITDIDDKIIKRAAENAETCESLTERLIQEMYADFDALNIKRPDVEPRATAYIE 119
Query: 659 EIV 661
EI+
Sbjct: 120 EII 122
>TIGR_CMR|VC_1848 [details] [associations]
symbol:VC_1848 "cysteinyl-tRNA synthetase" species:686
"Vibrio cholerae O1 biovar El Tor" [GO:0004817 "cysteine-tRNA
ligase activity" evidence=ISS] [GO:0006423 "cysteinyl-tRNA
aminoacylation" evidence=ISS] HAMAP:MF_00041 InterPro:IPR009080
InterPro:IPR015273 InterPro:IPR015803 Pfam:PF09190 PROSITE:PS00178
SMART:SM00840 Pfam:PF01406 GO:GO:0005524 GO:GO:0005737
GO:GO:0046872 EMBL:AE003852 GenomeReviews:AE003852_GR
Gene3D:3.40.50.620 InterPro:IPR014729 SUPFAM:SSF47323
eggNOG:COG0215 InterPro:IPR024909 PANTHER:PTHR10890 PRINTS:PR00983
GO:GO:0004817 GO:GO:0006423 KO:K01883 TIGRFAMs:TIGR00435
OMA:DFDALNM ProtClustDB:PRK00260 PIR:A82150 RefSeq:NP_231482.1
ProteinModelPortal:Q9KQZ9 SMR:Q9KQZ9 PRIDE:Q9KQZ9 DNASU:2613602
GeneID:2613602 KEGG:vch:VC1848 PATRIC:20082738 Uniprot:Q9KQZ9
Length = 459
Score = 289 (106.8 bits), Expect = 1.4e-31, Sum P(2) = 1.4e-31
Identities = 50/72 (69%), Positives = 57/72 (79%)
Query: 784 EASEKRSPNDFALWKKSKAGEPWWSSPWGEGRPGWHIECSVMASAVLGPQLDIHTGGVDL 843
EA+ KRSP DF LWK SK GEP W SPWG GRPGWHIECS M S++LG DIH GG DL
Sbjct: 172 EAA-KRSPLDFVLWKMSKPGEPTWESPWGSGRPGWHIECSAMNSSILGTHFDIHGGGSDL 230
Query: 844 KFPHHDNELAQA 855
+FPHH+NE+AQ+
Sbjct: 231 QFPHHENEIAQS 242
Score = 127 (49.8 bits), Expect = 1.4e-31, Sum P(2) = 1.4e-31
Identities = 25/54 (46%), Positives = 38/54 (70%)
Query: 425 GVRLEDI----EGKSYITFDILRRILSEYFNYNITYAMNITDIDDKIIKRARQN 474
GV + D+ G+++++FD++ R L Y Y++T+ NITDIDDKIIKRA +N
Sbjct: 29 GVTIYDLCHIGHGRTFVSFDVVARYL-RYLGYDLTFVRNITDIDDKIIKRAAEN 81
Score = 89 (36.4 bits), Expect = 1.3e-27, Sum P(2) = 1.3e-27
Identities = 28/81 (34%), Positives = 40/81 (49%)
Query: 109 DKYSQFDE-TVLPPTVLTRVSEYIPEIVASYIEKIIANGLAYES-NGSVYFNVNAFDSQP 166
+ Y+ FD + P V R + YI EI+A +E++I G AY + NG V F V+ +
Sbjct: 95 EMYADFDALNIKRPDVEPRATAYIEEIIA-LVERLIERGFAYVADNGDVMFEVSQYSE-- 151
Query: 167 NHYYAKLVPEAYGDTKTLQEG 187
Y KL + D LQ G
Sbjct: 152 ---YGKLSKQ---DLDQLQAG 166
Score = 55 (24.4 bits), Expect = 4.8e-24, Sum P(2) = 4.8e-24
Identities = 18/63 (28%), Positives = 30/63 (47%)
Query: 599 LTAVRDPLSDWLDSLHGSSITDNSIFATLPKHWEAEFHKDMADLNVLPPTVLTRVSEYIP 658
LT VR+ ++D D + + + +L + E + D LN+ P V R + YI
Sbjct: 61 LTFVRN-ITDIDDKIIKRAAENAETCESLTERLIQEMYADFDALNIKRPDVEPRATAYIE 119
Query: 659 EIV 661
EI+
Sbjct: 120 EII 122
>UNIPROTKB|A8JCV0 [details] [associations]
symbol:CHLREDRAFT_153062 "Cysteinyl-tRNA synthetase"
species:3055 "Chlamydomonas reinhardtii" [GO:0004817 "cysteine-tRNA
ligase activity" evidence=ISS] [GO:0005739 "mitochondrion"
evidence=ISS] [GO:0005829 "cytosol" evidence=ISS] [GO:0006423
"cysteinyl-tRNA aminoacylation" evidence=ISS] [GO:0009507
"chloroplast" evidence=ISS] HAMAP:MF_00041 InterPro:IPR009080
InterPro:IPR015273 InterPro:IPR015803 SMART:SM00840 Pfam:PF01406
GO:GO:0005829 GO:GO:0005739 GO:GO:0005524 GO:GO:0009507
GO:GO:0043067 GO:GO:0042407 Gene3D:3.40.50.620 InterPro:IPR014729
GO:GO:0010197 SUPFAM:SSF47323 eggNOG:COG0215 InterPro:IPR024909
PANTHER:PTHR10890 PRINTS:PR00983 GO:GO:0004817 GO:GO:0006423
KO:K01883 TIGRFAMs:TIGR00435 EMBL:DS496158 RefSeq:XP_001700207.1
ProteinModelPortal:A8JCV0 STRING:A8JCV0 ProMEX:A8JCV0
EnsemblPlants:EDO98322 GeneID:5725796 KEGG:cre:CHLREDRAFT_153062
ProtClustDB:CLSN2923397 BioCyc:CHLAMY:CHLREDRAFT_153062-MONOMER
Uniprot:A8JCV0
Length = 637
Score = 288 (106.4 bits), Expect = 1.5e-30, Sum P(2) = 1.5e-30
Identities = 52/82 (63%), Positives = 59/82 (71%)
Query: 786 SEKRSPNDFALWKKSKAGEPWWSSPWGEGRPGWHIECSVMASAVLGPQLDIHTGGVDLKF 845
S KRSP DFALWK +K GEP W SPWG GRPGWHIECS M ++GP +DIH GG DL F
Sbjct: 211 SRKRSPADFALWKAAKPGEPAWPSPWGPGRPGWHIECSSMIRELMGPVIDIHGGGRDLVF 270
Query: 846 PHHDNELAQAE---GLPTHDQE 864
PHH+NELAQ++ G H E
Sbjct: 271 PHHENELAQSQAACGCGQHGHE 292
Score = 129 (50.5 bits), Expect = 1.5e-30, Sum P(2) = 1.5e-30
Identities = 42/143 (29%), Positives = 68/143 (47%)
Query: 391 SEFRDNIRTEARLIKSTEILNQCDRLRD-EVLPNV-GVRLEDIE----GKSYITFDILRR 444
+E R+ + + KS E+ RL D V V GV + D + Y+ FD+L R
Sbjct: 30 AELRERVTFFNTMSKSKELFRP--RLSDGSVSMYVCGVTVYDYSHIGHARVYVAFDVLYR 87
Query: 445 ILSEYFNYNITYAMNITDIDDKIIKRARQNYLFEKHVQENEIQTSKILKDIGEVMGAFES 504
LS Y +TY N TDIDDKII RA+Q V+ +E+ T + + + + M A +
Sbjct: 88 FLSAACGYKVTYVRNFTDIDDKIIARAQQA---RSGVETSEL-TERFIDEFNKDMAAL-N 142
Query: 505 KMKLVTDPDKLTMMKNILSNVQE 527
+ +P + ++S + +
Sbjct: 143 VLPPALEPRATAFVPQMISTITD 165
Score = 84 (34.6 bits), Expect = 7.5e-26, Sum P(2) = 7.5e-26
Identities = 18/43 (41%), Positives = 29/43 (67%)
Query: 118 VLPPTVLTRVSEYIPEIVASYIEKIIANGLAYE-SNGSVYFNV 159
VLPP + R + ++P+++++ I IIANG AY G V+F+V
Sbjct: 143 VLPPALEPRATAFVPQMIST-ITDIIANGHAYAVDGGDVFFDV 184
Score = 83 (34.3 bits), Expect = 9.5e-26, Sum P(2) = 9.5e-26
Identities = 14/28 (50%), Positives = 22/28 (78%)
Query: 634 EFHKDMADLNVLPPTVLTRVSEYIPEIV 661
EF+KDMA LNVLPP + R + ++P+++
Sbjct: 133 EFNKDMAALNVLPPALEPRATAFVPQMI 160
Score = 51 (23.0 bits), Expect = 2.1e-22, Sum P(2) = 2.1e-22
Identities = 23/71 (32%), Positives = 37/71 (52%)
Query: 552 LTAVRDPFSDWLDSLHGSSITDNSIFAT--LPKHWEAEFHKDMADLNKLLTAVRDPLSDW 609
+T VR+ F+D D + + S T L + + EF+KDMA LN L A+ + +
Sbjct: 97 VTYVRN-FTDIDDKIIARAQQARSGVETSELTERFIDEFNKDMAALNVLPPALEPRATAF 155
Query: 610 LDSLHGSSITD 620
+ + S+ITD
Sbjct: 156 VPQMI-STITD 165
>UNIPROTKB|F1P2P3 [details] [associations]
symbol:CARS2 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0004817 "cysteine-tRNA ligase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0006423 "cysteinyl-tRNA aminoacylation"
evidence=IEA] HAMAP:MF_00041 InterPro:IPR009080 InterPro:IPR015803
Pfam:PF01406 GO:GO:0005524 GO:GO:0005737 Gene3D:3.40.50.620
InterPro:IPR014729 SUPFAM:SSF47323 InterPro:IPR024909
PANTHER:PTHR10890 PRINTS:PR00983 GO:GO:0004817 GO:GO:0006423
TIGRFAMs:TIGR00435 GeneTree:ENSGT00390000006347 OMA:IMVMGIT
EMBL:AADN02017981 EMBL:AADN02017982 IPI:IPI00584698
Ensembl:ENSGALT00000027215 Uniprot:F1P2P3
Length = 567
Score = 289 (106.8 bits), Expect = 1.9e-30, Sum P(2) = 1.9e-30
Identities = 49/71 (69%), Positives = 58/71 (81%)
Query: 786 SEKRSPNDFALWKKSKAGEPWWSSPWGEGRPGWHIECSVMASAVLGPQLDIHTGGVDLKF 845
++KR DFALWK +K E WSSPWG+GRPGWHIECS ++SAV G QLDIHTGG+DL F
Sbjct: 223 TDKRHGRDFALWKAAKPQELSWSSPWGKGRPGWHIECSTISSAVFGKQLDIHTGGIDLAF 282
Query: 846 PHHDNELAQAE 856
PHH+NE+AQ E
Sbjct: 283 PHHENEIAQCE 293
Score = 138 (53.6 bits), Expect = 7.7e-11, Sum P(2) = 7.7e-11
Identities = 34/81 (41%), Positives = 49/81 (60%)
Query: 118 VLPPTVLTRVSEYIPEIVASYIEKIIANGLAYE-SNGSVYFNVNAFDSQPNHYYAKLVPE 176
VLPPTV RV+E IP+I+ S+I+ IIANG AY S G+VYF+VN++ + A + P+
Sbjct: 158 VLPPTVYMRVTENIPQII-SFIKTIIANGQAYATSQGNVYFDVNSWGERYGVLTA-VSPD 215
Query: 177 AYGDTKTLQEGEVRGYPPWPA 197
G+ + R + W A
Sbjct: 216 TQGEAVDTDKRHGRDFALWKA 236
Score = 124 (48.7 bits), Expect = 1.9e-30, Sum P(2) = 1.9e-30
Identities = 32/94 (34%), Positives = 50/94 (53%)
Query: 435 SYITFDILRRILSEYFNYNITYAMNITDIDDKIIKRARQNYLFEKHVQENEIQTSKILKD 494
SY+ FDI+RRIL+ +F + M ITDIDDKII+RA + + V I +D
Sbjct: 95 SYVRFDIIRRILTRFFETEVIMVMGITDIDDKIIRRANEMNI--SPVALARIYEEDFKQD 152
Query: 495 IGEVMGAFESKMKLVTD--PDKLTMMKNILSNVQ 526
+ + + VT+ P ++ +K I++N Q
Sbjct: 153 MASLKVLPPTVYMRVTENIPQIISFIKTIIANGQ 186
Score = 97 (39.2 bits), Expect = 1.3e-27, Sum P(2) = 1.3e-27
Identities = 19/35 (54%), Positives = 26/35 (74%)
Query: 627 LPKHWEAEFHKDMADLNVLPPTVLTRVSEYIPEIV 661
L + +E +F +DMA L VLPPTV RV+E IP+I+
Sbjct: 141 LARIYEEDFKQDMASLKVLPPTVYMRVTENIPQII 175
Score = 97 (39.2 bits), Expect = 7.7e-11, Sum P(2) = 7.7e-11
Identities = 38/147 (25%), Positives = 63/147 (42%)
Query: 297 RFIQTKNNVHAALCDNMDTRSALDSIRDCISQVNIYLRG------TP-NQLLLRDIGAYV 349
R TK NV AA D+ DT A+ +I D I N L+ +P + ++ I +Y+
Sbjct: 400 RLASTKVNVKAAFADDFDTSRAVAAIMDLIHHGNRQLKAVTKDAVSPRSSVVYGSITSYI 459
Query: 350 TKILTVFGCIGDVKNIGFPLGGTGVESTNLEELVL------PYLTILSEFRDNIRTEARL 403
G + + + G T + S ++ELV Y +L E R + +
Sbjct: 460 ESFFNALGMSLEERQVAVGGGNTALLSNVMDELVSFRTKVRNYALVLPEATKEKRRQL-M 518
Query: 404 IKSTEILNQCDRLRDEVLPNVGVRLED 430
+ +L CD LR + L G+ ++D
Sbjct: 519 QERKPLLEACDSLRGD-LAAFGIHIKD 544
Score = 37 (18.1 bits), Expect = 2.4e-21, Sum P(2) = 2.4e-21
Identities = 8/19 (42%), Positives = 12/19 (63%)
Query: 580 LPKHWEAEFHKDMADLNKL 598
L + +E +F +DMA L L
Sbjct: 141 LARIYEEDFKQDMASLKVL 159
>FB|FBgn0033900 [details] [associations]
symbol:CG8257 species:7227 "Drosophila melanogaster"
[GO:0004817 "cysteine-tRNA ligase activity" evidence=ISS;IBA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0006423 "cysteinyl-tRNA
aminoacylation" evidence=IBA] [GO:0005829 "cytosol" evidence=IBA]
HAMAP:MF_00041 InterPro:IPR009080 InterPro:IPR015273
InterPro:IPR015803 SMART:SM00840 Pfam:PF01406 EMBL:AE013599
GO:GO:0005829 GO:GO:0005524 Gene3D:3.40.50.620 InterPro:IPR014729
SUPFAM:SSF47323 eggNOG:COG0215 InterPro:IPR024909 PANTHER:PTHR10890
PRINTS:PR00983 GO:GO:0004817 GO:GO:0006423 HSSP:P21888 KO:K01883
TIGRFAMs:TIGR00435 GeneTree:ENSGT00390000006347 EMBL:AY058452
RefSeq:NP_610930.1 UniGene:Dm.4265 SMR:Q7K3P0 STRING:Q7K3P0
EnsemblMetazoa:FBtr0087580 GeneID:36563 KEGG:dme:Dmel_CG8257
UCSC:CG8257-RA FlyBase:FBgn0033900 InParanoid:Q7K3P0 OMA:RESFRIR
OrthoDB:EOG4PVMDQ ChiTaRS:CG8257 GenomeRNAi:36563 NextBio:799222
Uniprot:Q7K3P0
Length = 558
Score = 260 (96.6 bits), Expect = 2.3e-30, Sum P(3) = 2.3e-30
Identities = 46/69 (66%), Positives = 54/69 (78%)
Query: 788 KRSPNDFALWKKSKAG-EPWWSSPWG-EGRPGWHIECSVMASAVLGPQLDIHTGGVDLKF 845
KR+ DFALWK K+G EP W++PWG EGRPGWHIECS +A G QLDIH GG+DL+F
Sbjct: 216 KRNTADFALWKARKSGSEPTWAAPWGGEGRPGWHIECSAIAGLFFGRQLDIHAGGLDLRF 275
Query: 846 PHHDNELAQ 854
PHH+NE AQ
Sbjct: 276 PHHENEEAQ 284
Score = 129 (50.5 bits), Expect = 2.3e-30, Sum P(3) = 2.3e-30
Identities = 24/38 (63%), Positives = 31/38 (81%)
Query: 435 SYITFDILRRILSEYFNYNITYAMNITDIDDKIIKRAR 472
+Y+ DIL+RIL +YF N+ AMNITD+DDKIIKRA+
Sbjct: 89 TYVKVDILQRILRDYFKINLVTAMNITDVDDKIIKRAQ 126
Score = 67 (28.6 bits), Expect = 2.3e-30, Sum P(3) = 2.3e-30
Identities = 14/35 (40%), Positives = 22/35 (62%)
Query: 627 LPKHWEAEFHKDMADLNVLPPTVLTRVSEYIPEIV 661
+ + +EAEF +DM LNV P V + V+ +P I+
Sbjct: 135 MARAYEAEFRQDMLRLNVQAPDVRSHVTTTMPVII 169
Score = 55 (24.4 bits), Expect = 5.7e-20, Sum P(2) = 5.7e-20
Identities = 15/44 (34%), Positives = 27/44 (61%)
Query: 118 VLPPTVLTRVSEYIPEIVASYIEKIIANGLAYES-NGSVYFNVN 160
V P V + V+ +P I+ +I+++I AY + + SVYF+V+
Sbjct: 152 VQAPDVRSHVTTTMPVII-QFIQQLIDGKQAYVTPDNSVYFDVS 194
Score = 43 (20.2 bits), Expect = 7.0e-28, Sum P(3) = 7.0e-28
Identities = 10/24 (41%), Positives = 14/24 (58%)
Query: 580 LPKHWEAEFHKDMADLNKLLTAVR 603
+ + +EAEF +DM LN VR
Sbjct: 135 MARAYEAEFRQDMLRLNVQAPDVR 158
>UNIPROTKB|Q9WZH8 [details] [associations]
symbol:cysS "Cysteine--tRNA ligase" species:243274
"Thermotoga maritima MSB8" [GO:0004817 "cysteine-tRNA ligase
activity" evidence=ISS] [GO:0005829 "cytosol" evidence=ISS]
[GO:0006423 "cysteinyl-tRNA aminoacylation" evidence=ISS]
HAMAP:MF_00041 InterPro:IPR009080 InterPro:IPR015273
InterPro:IPR015803 Pfam:PF09190 PROSITE:PS00178 SMART:SM00840
Pfam:PF01406 GO:GO:0005829 GO:GO:0005524 GO:GO:0046872
Gene3D:3.40.50.620 InterPro:IPR014729 EMBL:AE000512
GenomeReviews:AE000512_GR SUPFAM:SSF47323 eggNOG:COG0215
InterPro:IPR024909 PANTHER:PTHR10890 PRINTS:PR00983 GO:GO:0004817
GO:GO:0006423 KO:K01883 TIGRFAMs:TIGR00435 OMA:DFDALNM
ProtClustDB:PRK00260 PIR:E72341 RefSeq:NP_228528.1
ProteinModelPortal:Q9WZH8 PRIDE:Q9WZH8 GeneID:898386
KEGG:tma:TM0719 PATRIC:23936358 Uniprot:Q9WZH8
Length = 460
Score = 298 (110.0 bits), Expect = 3.2e-30, Sum P(3) = 3.2e-30
Identities = 52/76 (68%), Positives = 59/76 (77%)
Query: 784 EASE-KRSPNDFALWKKSKAGEPWWSSPWGEGRPGWHIECSVMASAVLGPQLDIHTGGVD 842
E E K+SP DF+LWKK+K GEP W SPWGEGRPGWHIEC+VM+ +LG DIH GG D
Sbjct: 168 EVDETKKSPLDFSLWKKAKPGEPCWKSPWGEGRPGWHIECTVMSVKILGESFDIHAGGED 227
Query: 843 LKFPHHDNELAQAEGL 858
L FPHH+NE AQAE L
Sbjct: 228 LVFPHHENEKAQAEAL 243
Score = 95 (38.5 bits), Expect = 3.2e-30, Sum P(3) = 3.2e-30
Identities = 19/37 (51%), Positives = 23/37 (62%)
Query: 437 ITFDILRRILSEYFNYNITYAMNITDIDDKIIKRARQ 473
+ FD+ RR L EY Y + N TDIDDKII +A Q
Sbjct: 44 LVFDVFRRYL-EYRGYRVIMVQNFTDIDDKIINKANQ 79
Score = 80 (33.2 bits), Expect = 8.8e-28, Sum P(2) = 8.8e-28
Identities = 15/46 (32%), Positives = 27/46 (58%)
Query: 118 VLPPTVLTRVSEYIPEIVASYIEKIIANGLAYESNGSVYFNVNAFD 163
+ P R ++++ +IV IEK++ G AY++ VYF+V F+
Sbjct: 104 IRPANFHPRTTDFVEDIV-EIIEKLVEKGFAYQTETGVYFDVRKFE 148
Score = 44 (20.5 bits), Expect = 3.2e-30, Sum P(3) = 3.2e-30
Identities = 9/38 (23%), Positives = 20/38 (52%)
Query: 624 FATLPKHWEAEFHKDMADLNVLPPTVLTRVSEYIPEIV 661
+ T+ + AE+ +D L + P R ++++ +IV
Sbjct: 84 YKTVADTFIAEYWRDAHALGIRPANFHPRTTDFVEDIV 121
>UNIPROTKB|Q7NMB5 [details] [associations]
symbol:cysS "Cysteine--tRNA ligase" species:251221
"Gloeobacter violaceus PCC 7421" [GO:0004817 "cysteine-tRNA ligase
activity" evidence=ISS] [GO:0005829 "cytosol" evidence=ISS]
[GO:0006423 "cysteinyl-tRNA aminoacylation" evidence=ISS]
HAMAP:MF_00041 InterPro:IPR009080 InterPro:IPR015273
InterPro:IPR015803 Pfam:PF09190 PROSITE:PS00178 SMART:SM00840
Pfam:PF01406 GO:GO:0005829 GO:GO:0005524 GO:GO:0046872
Gene3D:3.40.50.620 InterPro:IPR014729 SUPFAM:SSF47323 EMBL:BA000045
GenomeReviews:BA000045_GR eggNOG:COG0215 InterPro:IPR024909
PANTHER:PTHR10890 PRINTS:PR00983 GO:GO:0004817 GO:GO:0006423
KO:K01883 TIGRFAMs:TIGR00435 OMA:DFDALNM RefSeq:NP_923797.1
ProteinModelPortal:Q7NMB5 GeneID:2599277 KEGG:gvi:gvip106
PATRIC:22041097 BioCyc:GVIO251221:GH9A-903-MONOMER Uniprot:Q7NMB5
Length = 482
Score = 289 (106.8 bits), Expect = 4.3e-30, Sum P(3) = 4.3e-30
Identities = 48/79 (60%), Positives = 58/79 (73%)
Query: 780 LSSQEASEKRSPNDFALWKKSKAGEPWWSSPWGEGRPGWHIECSVMASAVLGPQLDIHTG 839
L +E + K+ P DFALWK +K GEP W SPWG GRPGWHIECS M LG +DIH G
Sbjct: 171 LQDEELARKKDPFDFALWKGAKPGEPAWDSPWGAGRPGWHIECSAMVRKSLGETIDIHAG 230
Query: 840 GVDLKFPHHDNELAQAEGL 858
G DL+FPHH+NE+AQ+E +
Sbjct: 231 GEDLQFPHHENEIAQSEAV 249
Score = 107 (42.7 bits), Expect = 4.3e-30, Sum P(3) = 4.3e-30
Identities = 22/54 (40%), Positives = 33/54 (61%)
Query: 433 GKSYITFDILRRILSEYFNYNITYAMNITDIDDKIIKRARQNYLFEKHVQENEI 486
G++Y+ +D +RR L Y +TY N TD+DDKI++RA+Q + V E I
Sbjct: 42 GRTYVVWDTVRRYLISR-GYAVTYVQNFTDVDDKILRRAQQEGTTMEAVAEKYI 94
Score = 70 (29.7 bits), Expect = 2.3e-25, Sum P(2) = 2.3e-25
Identities = 19/64 (29%), Positives = 34/64 (53%)
Query: 126 RVSEYIPEIVASYIEKIIANGLAYESNGSVYFNVNAFDSQPNHYYAKLVPEAYGDTKTLQ 185
R ++ +PEI A I+++ + G AY + G VY++V F +L G ++ LQ
Sbjct: 114 RATQTMPEIGA-LIDRLTSIGYAYPAAGDVYYSVRRFAEYGKLSGKRLAELEAGASERLQ 172
Query: 186 EGEV 189
+ E+
Sbjct: 173 DEEL 176
Score = 46 (21.3 bits), Expect = 4.3e-30, Sum P(3) = 4.3e-30
Identities = 11/28 (39%), Positives = 16/28 (57%)
Query: 633 AEFHKDMADLNVLPPTVLTRVSEYIPEI 660
A + +DM LNVL R ++ +PEI
Sbjct: 95 AAYFEDMDRLNVLRADSYPRATQTMPEI 122
>UNIPROTKB|A6V727 [details] [associations]
symbol:cysS "Cysteine--tRNA ligase" species:381754
"Pseudomonas aeruginosa PA7" [GO:0004817 "cysteine-tRNA ligase
activity" evidence=ISS] [GO:0005829 "cytosol" evidence=ISS]
[GO:0006423 "cysteinyl-tRNA aminoacylation" evidence=ISS]
HAMAP:MF_00041 InterPro:IPR009080 InterPro:IPR015273
InterPro:IPR015803 Pfam:PF09190 PROSITE:PS00178 SMART:SM00840
Pfam:PF01406 GO:GO:0005829 GO:GO:0005524 GO:GO:0046872
EMBL:CP000744 GenomeReviews:CP000744_GR Gene3D:3.40.50.620
InterPro:IPR014729 SUPFAM:SSF47323 eggNOG:COG0215
InterPro:IPR024909 PANTHER:PTHR10890 PRINTS:PR00983 GO:GO:0004817
GO:GO:0006423 KO:K01883 TIGRFAMs:TIGR00435 HOGENOM:HOG000245250
OMA:DFDALNM ProtClustDB:PRK00260 RefSeq:YP_001348862.1
ProteinModelPortal:A6V727 SMR:A6V727 STRING:A6V727 GeneID:5355045
KEGG:pap:PSPA7_3508 PATRIC:19828668
BioCyc:PAER381754:GHMY-3545-MONOMER Uniprot:A6V727
Length = 460
Score = 286 (105.7 bits), Expect = 7.9e-30, Sum P(2) = 7.9e-30
Identities = 48/69 (69%), Positives = 55/69 (79%)
Query: 788 KRSPNDFALWKKSKAGEPWWSSPWGEGRPGWHIECSVMASAVLGPQLDIHTGGVDLKFPH 847
K P DF LWK +K GEP WSSPWGEGRPGWHIECSVM++ LG DIH GG DL+FPH
Sbjct: 175 KEDPLDFVLWKGAKPGEPSWSSPWGEGRPGWHIECSVMSTCCLGDSFDIHGGGNDLEFPH 234
Query: 848 HDNELAQAE 856
H+NE+AQ+E
Sbjct: 235 HENEIAQSE 243
Score = 114 (45.2 bits), Expect = 7.9e-30, Sum P(2) = 7.9e-30
Identities = 22/42 (52%), Positives = 30/42 (71%)
Query: 433 GKSYITFDILRRILSEYFNYNITYAMNITDIDDKIIKRARQN 474
G+S + FD++ R L + Y++TY NITDIDDKII RA +N
Sbjct: 41 GRSMVAFDVITRWL-RHRGYDLTYVRNITDIDDKIINRANEN 81
Score = 61 (26.5 bits), Expect = 2.8e-24, Sum P(2) = 2.8e-24
Identities = 18/59 (30%), Positives = 30/59 (50%)
Query: 599 LTAVRDPLSDWLDSLHGSSITDNSIFATLPKHWEAEFHKDMADLNVLPPTVLTRVSEYI 657
LT VR+ ++D D + + + F L + A H+D A LN+L P R +++I
Sbjct: 61 LTYVRN-ITDIDDKIINRANENGEPFDVLTERMIAAMHEDEARLNILKPDQEPRATDHI 118
Score = 59 (25.8 bits), Expect = 4.5e-24, Sum P(2) = 4.5e-24
Identities = 16/46 (34%), Positives = 24/46 (52%)
Query: 118 VLPPTVLTRVSEYIPEIVASYIEKIIANGLAYE-SNGSVYFNVNAF 162
+L P R +++I + A I+ +I G AY NG VY+ V F
Sbjct: 105 ILKPDQEPRATDHIAGMHAM-IQTLIDKGYAYAPGNGDVYYRVGRF 149
Score = 46 (21.3 bits), Expect = 1.0e-22, Sum P(2) = 1.0e-22
Identities = 18/64 (28%), Positives = 31/64 (48%)
Query: 552 LTAVRDPFSDWLDSLHGSSITDNSIFATLPKHWEAEFHKDMADLNKLLTAVRDP-LSDWL 610
LT VR+ +D D + + + F L + A H+D A LN +L ++P +D +
Sbjct: 61 LTYVRN-ITDIDDKIINRANENGEPFDVLTERMIAAMHEDEARLN-ILKPDQEPRATDHI 118
Query: 611 DSLH 614
+H
Sbjct: 119 AGMH 122
>TAIR|locus:2152237 [details] [associations]
symbol:AT5G38830 "AT5G38830" species:3702 "Arabidopsis
thaliana" [GO:0004817 "cysteine-tRNA ligase activity"
evidence=IEA;ISS;IBA] [GO:0005524 "ATP binding" evidence=IEA;ISS]
[GO:0005737 "cytoplasm" evidence=ISM] [GO:0005739 "mitochondrion"
evidence=IBA] [GO:0005829 "cytosol" evidence=IDA;IBA] [GO:0006423
"cysteinyl-tRNA aminoacylation" evidence=IEA;ISS;IBA] [GO:0009507
"chloroplast" evidence=IBA] [GO:0046686 "response to cadmium ion"
evidence=IEP] HAMAP:MF_00041 InterPro:IPR009080 InterPro:IPR015803
Pfam:PF01406 GO:GO:0005829 GO:GO:0005739 GO:GO:0005524
EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0009507 GO:GO:0046686
Gene3D:3.40.50.620 InterPro:IPR014729 SUPFAM:SSF47323
eggNOG:COG0215 InterPro:IPR024909 PANTHER:PTHR10890 PRINTS:PR00983
GO:GO:0004817 GO:GO:0006423 KO:K01883 TIGRFAMs:TIGR00435
HOGENOM:HOG000245250 OMA:HTRAGER EMBL:BT033092 IPI:IPI00528005
RefSeq:NP_198699.1 UniGene:At.30380 ProteinModelPortal:B3LFA4
SMR:B3LFA4 STRING:B3LFA4 PaxDb:B3LFA4 PRIDE:B3LFA4
EnsemblPlants:AT5G38830.1 GeneID:833874 KEGG:ath:AT5G38830
TAIR:At5g38830 PhylomeDB:B3LFA4 ProtClustDB:CLSN2916730
Genevestigator:B3LFA4 Uniprot:B3LFA4
Length = 511
Score = 280 (103.6 bits), Expect = 1.4e-29, Sum P(3) = 1.4e-29
Identities = 47/69 (68%), Positives = 53/69 (76%)
Query: 786 SEKRSPNDFALWKKSKAGEPWWSSPWGEGRPGWHIECSVMASAVLGPQLDIHTGGVDLKF 845
S KR+P DFALWK +K EP W SPWG GRPGWHIECS M+ L P+ DIH GG DLKF
Sbjct: 178 SRKRNPADFALWKAAKPDEPSWESPWGPGRPGWHIECSAMSVHYLSPKFDIHGGGADLKF 237
Query: 846 PHHDNELAQ 854
PHH+NE+AQ
Sbjct: 238 PHHENEIAQ 246
Score = 103 (41.3 bits), Expect = 1.4e-29, Sum P(3) = 1.4e-29
Identities = 18/41 (43%), Positives = 31/41 (75%)
Query: 434 KSYITFDILRRILSEYFNYNITYAMNITDIDDKIIKRARQN 474
++ ++FD+L R L ++ +Y++T+ N TD+DDKII RA +N
Sbjct: 48 RAAVSFDVLYRYL-KHLDYDVTFVRNFTDVDDKIIDRANKN 87
Score = 91 (37.1 bits), Expect = 2.9e-26, Sum P(2) = 2.9e-26
Identities = 25/55 (45%), Positives = 30/55 (54%)
Query: 119 LPPTVLTRVSEYIPEIVASYIEKIIANGLAYESNGSVYFNVNAFDSQPNHYYAKL 173
LPPT RVSE++ I+ IEKII Y G V+F+V D PN Y KL
Sbjct: 112 LPPTHQPRVSEHMDNII-KMIEKIIEKDCGYVVEGDVFFSV---DKSPN--YGKL 160
Score = 59 (25.8 bits), Expect = 1.4e-29, Sum P(3) = 1.4e-29
Identities = 13/28 (46%), Positives = 17/28 (60%)
Query: 634 EFHKDMADLNVLPPTVLTRVSEYIPEIV 661
E+ DM L LPPT RVSE++ I+
Sbjct: 101 EYLVDMGALQCLPPTHQPRVSEHMDNII 128
>TAIR|locus:2042521 [details] [associations]
symbol:SYCO ARATH "cysteinyl t-RNA synthetase"
species:3702 "Arabidopsis thaliana" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0004812 "aminoacyl-tRNA ligase activity"
evidence=IEA] [GO:0004817 "cysteine-tRNA ligase activity"
evidence=IEA;ISS;IBA] [GO:0005524 "ATP binding" evidence=IEA;ISS]
[GO:0005737 "cytoplasm" evidence=ISM;IEA] [GO:0005829 "cytosol"
evidence=IBA] [GO:0006418 "tRNA aminoacylation for protein
translation" evidence=IEA] [GO:0006423 "cysteinyl-tRNA
aminoacylation" evidence=IEA;ISS;IBA] [GO:0009507 "chloroplast"
evidence=ISM;IDA] [GO:0005739 "mitochondrion" evidence=IDA]
[GO:0009570 "chloroplast stroma" evidence=IDA] [GO:0010197 "polar
nucleus fusion" evidence=IMP] [GO:0042407 "cristae formation"
evidence=IMP] [GO:0043067 "regulation of programmed cell death"
evidence=IMP] [GO:0009658 "chloroplast organization" evidence=RCA]
[GO:0048481 "ovule development" evidence=RCA] HAMAP:MF_00041
InterPro:IPR009080 InterPro:IPR015273 InterPro:IPR015803
Pfam:PF09190 SMART:SM00840 Pfam:PF01406 GO:GO:0005829 GO:GO:0005739
GO:GO:0005524 GO:GO:0009570 EMBL:CP002685 GO:GO:0043067
GO:GO:0042407 Gene3D:3.40.50.620 InterPro:IPR014729 GO:GO:0010197
SUPFAM:SSF47323 InterPro:IPR024909 PANTHER:PTHR10890 PRINTS:PR00983
GO:GO:0004817 GO:GO:0006423 KO:K01883 TIGRFAMs:TIGR00435
OMA:NHICNIC IPI:IPI00539163 RefSeq:NP_565717.2 UniGene:At.21710
ProteinModelPortal:F4IPY2 SMR:F4IPY2 PRIDE:F4IPY2
EnsemblPlants:AT2G31170.1 GeneID:817673 KEGG:ath:AT2G31170
Uniprot:F4IPY2
Length = 563
Score = 283 (104.7 bits), Expect = 1.5e-29, Sum P(2) = 1.5e-29
Identities = 46/70 (65%), Positives = 56/70 (80%)
Query: 786 SEKRSPNDFALWKKSKAGEPWWSSPWGEGRPGWHIECSVMASAVLGPQLDIHTGGVDLKF 845
+ K+ P DFALWK +K GEP+W SPWG GRPGWHIECS M++A LG DIH GG+DL F
Sbjct: 235 TRKKHPADFALWKAAKEGEPFWESPWGRGRPGWHIECSAMSAAYLGYSFDIHGGGMDLVF 294
Query: 846 PHHDNELAQA 855
PHH+NE+AQ+
Sbjct: 295 PHHENEIAQS 304
Score = 122 (48.0 bits), Expect = 1.5e-29, Sum P(2) = 1.5e-29
Identities = 32/98 (32%), Positives = 52/98 (53%)
Query: 436 YITFDILRRILSEYFNYNITYAMNITDIDDKIIKRARQNYLFEKHVQENEIQTSKILKDI 495
Y+TFD+L R L ++ Y ++Y N TD+DDKII RA++ L E + + + +D+
Sbjct: 107 YVTFDVLLRYL-KHLGYEVSYVRNFTDVDDKIIARAKE--LEEDPISLSRRFCEEFNRDM 163
Query: 496 GEVMGAFESKMKLVTD--PDKLTMMKNILSNVQEAKQD 531
++ S V+D P + ++K IL N K D
Sbjct: 164 EQLQCLDPSVQPRVSDHIPQIIDLIKQILDNGYAYKVD 201
Score = 78 (32.5 bits), Expect = 5.9e-25, Sum P(2) = 5.9e-25
Identities = 15/36 (41%), Positives = 25/36 (69%)
Query: 626 TLPKHWEAEFHKDMADLNVLPPTVLTRVSEYIPEIV 661
+L + + EF++DM L L P+V RVS++IP+I+
Sbjct: 150 SLSRRFCEEFNRDMEQLQCLDPSVQPRVSDHIPQII 185
Score = 42 (19.8 bits), Expect = 3.4e-21, Sum P(2) = 3.4e-21
Identities = 17/73 (23%), Positives = 40/73 (54%)
Query: 543 IKNVTFQKLLTAVRDPFSDWLDSL--HGSSITDNSIFATLPKHWEAEFHKDMADLNKLLT 600
+K++ ++ ++ VR+ F+D D + + ++ I +L + + EF++DM L L
Sbjct: 117 LKHLGYE--VSYVRN-FTDVDDKIIARAKELEEDPI--SLSRRFCEEFNRDMEQLQCLDP 171
Query: 601 AVRDPLSDWLDSL 613
+V+ +SD + +
Sbjct: 172 SVQPRVSDHIPQI 184
>TIGR_CMR|SO_1791 [details] [associations]
symbol:SO_1791 "cysteinyl-tRNA synthetase" species:211586
"Shewanella oneidensis MR-1" [GO:0004817 "cysteine-tRNA ligase
activity" evidence=ISS] [GO:0006423 "cysteinyl-tRNA aminoacylation"
evidence=ISS] HAMAP:MF_00041 InterPro:IPR009080 InterPro:IPR015273
InterPro:IPR015803 Pfam:PF09190 PROSITE:PS00178 SMART:SM00840
Pfam:PF01406 GO:GO:0005524 GO:GO:0005737 GO:GO:0046872
EMBL:AE014299 GenomeReviews:AE014299_GR Gene3D:3.40.50.620
InterPro:IPR014729 SUPFAM:SSF47323 eggNOG:COG0215
InterPro:IPR024909 PANTHER:PTHR10890 PRINTS:PR00983 GO:GO:0004817
GO:GO:0006423 KO:K01883 TIGRFAMs:TIGR00435 HOGENOM:HOG000245250
OMA:DFDALNM ProtClustDB:PRK00260 RefSeq:NP_717400.1
ProteinModelPortal:Q8EG22 SMR:Q8EG22 PRIDE:Q8EG22 GeneID:1169564
KEGG:son:SO_1791 PATRIC:23523199 Uniprot:Q8EG22
Length = 459
Score = 271 (100.5 bits), Expect = 1.8e-29, Sum P(3) = 1.8e-29
Identities = 46/68 (67%), Positives = 52/68 (76%)
Query: 788 KRSPNDFALWKKSKAGEPWWSSPWGEGRPGWHIECSVMASAVLGPQLDIHTGGVDLKFPH 847
K++P DF LWK SK GEP W SPWG GRPGWHIECS M S LG DIH GG DL+FPH
Sbjct: 175 KQNPMDFVLWKMSKPGEPTWESPWGPGRPGWHIECSAMNSKHLGLHFDIHGGGSDLQFPH 234
Query: 848 HDNELAQA 855
H+NE+AQ+
Sbjct: 235 HENEIAQS 242
Score = 116 (45.9 bits), Expect = 1.8e-29, Sum P(3) = 1.8e-29
Identities = 24/54 (44%), Positives = 36/54 (66%)
Query: 425 GVRLEDI----EGKSYITFDILRRILSEYFNYNITYAMNITDIDDKIIKRARQN 474
GV + D+ G+++++FD++ R L Y Y + + NITDIDDKIIKRA +N
Sbjct: 29 GVTVYDLCHIGHGRTFVSFDMIVRYL-RYAGYEVNFQRNITDIDDKIIKRANEN 81
Score = 50 (22.7 bits), Expect = 1.8e-29, Sum P(3) = 1.8e-29
Identities = 13/36 (36%), Positives = 17/36 (47%)
Query: 626 TLPKHWEAEFHKDMADLNVLPPTVLTRVSEYIPEIV 661
TL E HKD LN+ P R + +I EI+
Sbjct: 87 TLTDRLIGEMHKDFDALNMKRPDFEPRATLHIAEII 122
>UNIPROTKB|O67163 [details] [associations]
symbol:cysS "Cysteine--tRNA ligase" species:224324 "Aquifex
aeolicus VF5" [GO:0004817 "cysteine-tRNA ligase activity"
evidence=ISS] [GO:0005829 "cytosol" evidence=ISS] [GO:0006423
"cysteinyl-tRNA aminoacylation" evidence=ISS] HAMAP:MF_00041
InterPro:IPR009080 InterPro:IPR015273 InterPro:IPR015803
Pfam:PF09190 PROSITE:PS00178 SMART:SM00840 Pfam:PF01406
GO:GO:0005829 GO:GO:0005524 GO:GO:0046872 Gene3D:3.40.50.620
InterPro:IPR014729 SUPFAM:SSF47323 EMBL:AE000657
GenomeReviews:AE000657_GR eggNOG:COG0215 InterPro:IPR024909
PANTHER:PTHR10890 PRINTS:PR00983 GO:GO:0004817 GO:GO:0006423
KO:K01883 TIGRFAMs:TIGR00435 HOGENOM:HOG000245250 OMA:DFDALNM
ProtClustDB:PRK00260 PIR:H70391 RefSeq:NP_213726.1
ProteinModelPortal:O67163 GeneID:1193797 KEGG:aae:aq_1068
PATRIC:20959420 BioCyc:AAEO224324:GJBH-761-MONOMER Uniprot:O67163
Length = 495
Score = 285 (105.4 bits), Expect = 2.3e-29, Sum P(2) = 2.3e-29
Identities = 51/76 (67%), Positives = 57/76 (75%)
Query: 784 EASEK-RSPNDFALWKKSKAGEPWWSSPWGEGRPGWHIECSVMASAVLGPQLDIHTGGVD 842
E SEK R P DFALWK SKAGEP W SPWG+GRPGWH EC M LG +DIH GG+D
Sbjct: 170 EPSEKKRDPLDFALWKASKAGEPAWDSPWGKGRPGWHTECVAMVFKHLGETIDIHGGGLD 229
Query: 843 LKFPHHDNELAQAEGL 858
L FPHH+NE+AQAE +
Sbjct: 230 LVFPHHENEIAQAEAI 245
Score = 114 (45.2 bits), Expect = 2.3e-29, Sum P(2) = 2.3e-29
Identities = 21/41 (51%), Positives = 28/41 (68%)
Query: 433 GKSYITFDILRRILSEYFNYNITYAMNITDIDDKIIKRARQ 473
G+S I FD+ RR L E+ Y + + N TD+DDKII RA+Q
Sbjct: 42 GRSLIVFDVFRRFL-EHLGYQVKFVRNFTDVDDKIINRAKQ 81
Score = 97 (39.2 bits), Expect = 1.4e-27, Sum P(2) = 1.4e-27
Identities = 21/45 (46%), Positives = 28/45 (62%)
Query: 118 VLPPTVLTRVSEYIPEIVASYIEKIIANGLAYESNGSVYFNVNAF 162
V P V RV+E+IPEI+ I+K++ G AY G VYF+V F
Sbjct: 106 VRPADVEPRVTEHIPEII-EVIQKLVEKGYAYVVEGDVYFSVKKF 149
Score = 78 (32.5 bits), Expect = 1.3e-25, Sum P(2) = 1.3e-25
Identities = 21/74 (28%), Positives = 39/74 (52%)
Query: 588 FHKDMADLNKLLTAVRDPLSDWLDSLHGSSITDNSIFATLPKHWEAEFHKDMADLNVLPP 647
F + + L + VR+ +D D + + + + F T+ + A ++ DM ++ V P
Sbjct: 51 FRRFLEHLGYQVKFVRN-FTDVDDKIINRAKQECTDFMTIADRYIARYYVDMENIRVRPA 109
Query: 648 TVLTRVSEYIPEIV 661
V RV+E+IPEI+
Sbjct: 110 DVEPRVTEHIPEII 123
>TIGR_CMR|DET_0061 [details] [associations]
symbol:DET_0061 "cysteinyl-tRNA synthetase" species:243164
"Dehalococcoides ethenogenes 195" [GO:0004817 "cysteine-tRNA ligase
activity" evidence=ISS] [GO:0006423 "cysteinyl-tRNA aminoacylation"
evidence=ISS] HAMAP:MF_00041 InterPro:IPR009080 InterPro:IPR015273
InterPro:IPR015803 Pfam:PF09190 PROSITE:PS00178 SMART:SM00840
Pfam:PF01406 GO:GO:0005524 GO:GO:0005737 GO:GO:0046872
EMBL:CP000027 GenomeReviews:CP000027_GR Gene3D:3.40.50.620
InterPro:IPR014729 SUPFAM:SSF47323 eggNOG:COG0215
InterPro:IPR024909 PANTHER:PTHR10890 PRINTS:PR00983 GO:GO:0004817
GO:GO:0006423 KO:K01883 TIGRFAMs:TIGR00435 HOGENOM:HOG000245250
OMA:DFDALNM ProtClustDB:PRK00260 RefSeq:YP_180814.1
ProteinModelPortal:Q3ZAD5 STRING:Q3ZAD5 GeneID:3229029
KEGG:det:DET0061 PATRIC:21607221 BioCyc:DETH243164:GJNF-61-MONOMER
Uniprot:Q3ZAD5
Length = 458
Score = 280 (103.6 bits), Expect = 8.5e-29, Sum P(2) = 8.5e-29
Identities = 48/74 (64%), Positives = 55/74 (74%)
Query: 783 QEASEKRSPNDFALWKKSKAGEPWWSSPWGEGRPGWHIECSVMASAVLGPQLDIHTGGVD 842
+ EK P DFALWK +K GEP W SPWG GRPGWHIECS M+ LG Q+DIH GG D
Sbjct: 168 EPGEEKEYPMDFALWKATKPGEPSWESPWGLGRPGWHIECSAMSLRYLGEQIDIHGGGQD 227
Query: 843 LKFPHHDNELAQAE 856
L FPHH+NE+AQ+E
Sbjct: 228 LIFPHHENEIAQSE 241
Score = 111 (44.1 bits), Expect = 8.5e-29, Sum P(2) = 8.5e-29
Identities = 24/52 (46%), Positives = 30/52 (57%)
Query: 435 SYITFDILRRILSEYFNYNITYAMNITDIDDKIIKRARQNYLFEKHVQENEI 486
SYI FD++RR LS Y Y + Y N TDIDDKII +A + + E I
Sbjct: 42 SYINFDVIRRYLS-YKGYRVKYIQNFTDIDDKIIAKANAQGIEPSTLAERNI 92
Score = 78 (32.5 bits), Expect = 2.4e-25, Sum P(2) = 2.4e-25
Identities = 20/76 (26%), Positives = 34/76 (44%)
Query: 118 VLPPTVLTRVSEYIPEIVASYIEKIIANGLAYESNGSVYFNVNAFDSQPNHYYAKLVPEA 177
+ P R ++ +P+I+ + +I G AYE+ GSVY V + + L
Sbjct: 104 ITPADYYPRATQEVPKII-EMVSGLIEKGYAYEAGGSVYLRVQKVEGYGKLSHRTLEQMM 162
Query: 178 YGDTKTLQEGEVRGYP 193
G ++ GE + YP
Sbjct: 163 AG--ARIEPGEEKEYP 176
Score = 46 (21.3 bits), Expect = 5.3e-22, Sum P(2) = 5.3e-22
Identities = 11/37 (29%), Positives = 19/37 (51%)
Query: 625 ATLPKHWEAEFHKDMADLNVLPPTVLTRVSEYIPEIV 661
+TL + F MA LN+ P R ++ +P+I+
Sbjct: 85 STLAERNIGVFLDAMAALNITPADYYPRATQEVPKII 121
>UNIPROTKB|Q747A2 [details] [associations]
symbol:cysS "Cysteine--tRNA ligase" species:243231
"Geobacter sulfurreducens PCA" [GO:0004817 "cysteine-tRNA ligase
activity" evidence=ISS] [GO:0005829 "cytosol" evidence=ISS]
[GO:0006423 "cysteinyl-tRNA aminoacylation" evidence=ISS]
HAMAP:MF_00041 InterPro:IPR009080 InterPro:IPR015273
InterPro:IPR015803 Pfam:PF09190 PROSITE:PS00178 SMART:SM00840
Pfam:PF01406 GO:GO:0005829 GO:GO:0005524 GO:GO:0046872
EMBL:AE017180 GenomeReviews:AE017180_GR Gene3D:3.40.50.620
InterPro:IPR014729 SUPFAM:SSF47323 eggNOG:COG0215
InterPro:IPR024909 PANTHER:PTHR10890 PRINTS:PR00983 GO:GO:0004817
GO:GO:0006423 KO:K01883 TIGRFAMs:TIGR00435 HOGENOM:HOG000245250
OMA:DFDALNM ProtClustDB:PRK00260 RefSeq:NP_954405.1
ProteinModelPortal:Q747A2 GeneID:2688225 KEGG:gsu:GSU3365
PATRIC:22029585 BioCyc:GSUL243231:GH27-3315-MONOMER Uniprot:Q747A2
Length = 481
Score = 287 (106.1 bits), Expect = 1.8e-28, Sum P(2) = 1.8e-28
Identities = 48/70 (68%), Positives = 55/70 (78%)
Query: 787 EKRSPNDFALWKKSKAGEPWWSSPWGEGRPGWHIECSVMASAVLGPQLDIHTGGVDLKFP 846
+KR P DFALWK SK GEP+W SPWG+GRPGWHIECS M+ LG DIH GG DL FP
Sbjct: 174 KKRHPMDFALWKGSKPGEPYWDSPWGQGRPGWHIECSAMSMKYLGETFDIHGGGKDLVFP 233
Query: 847 HHDNELAQAE 856
HH+NE+AQ+E
Sbjct: 234 HHENEIAQSE 243
Score = 102 (41.0 bits), Expect = 1.8e-28, Sum P(2) = 1.8e-28
Identities = 19/43 (44%), Positives = 30/43 (69%)
Query: 121 PTVLTRVSEYIPEIVASYIEKIIANGLAYESNGSVYFNVNAFD 163
PT + +E+I E++ IE+++A G AY ++G VYF+V AFD
Sbjct: 109 PTYQPKATEHIAEMI-QVIERLVAKGFAYAADGDVYFSVEAFD 150
Score = 92 (37.4 bits), Expect = 2.0e-27, Sum P(2) = 2.0e-27
Identities = 20/55 (36%), Positives = 32/55 (58%)
Query: 434 KSYITFDILRRILSEYFNYNITYAMNITDIDDKIIKRARQ-----NYLFEKHVQE 483
++ + FD++ R L + Y +TY N TD+DDKII RA + N + E+ + E
Sbjct: 43 RANVVFDMIYRYL-RHAGYEVTYVRNYTDVDDKIINRANKEGVPFNVISERFIAE 96
Score = 63 (27.2 bits), Expect = 2.1e-24, Sum P(2) = 2.1e-24
Identities = 18/63 (28%), Positives = 34/63 (53%)
Query: 599 LTAVRDPLSDWLDSLHGSSITDNSIFATLPKHWEAEFHKDMADLNVLPPTVLTRVSEYIP 658
+T VR+ +D D + + + F + + + AEF +DMA L + PT + +E+I
Sbjct: 62 VTYVRN-YTDVDDKIINRANKEGVPFNVISERFIAEFDRDMAALGLDLPTYQPKATEHIA 120
Query: 659 EIV 661
E++
Sbjct: 121 EMI 123
Score = 43 (20.2 bits), Expect = 2.6e-22, Sum P(2) = 2.6e-22
Identities = 13/44 (29%), Positives = 24/44 (54%)
Query: 552 LTAVRDPFSDWLDSLHGSSITDNSIFATLPKHWEAEFHKDMADL 595
+T VR+ ++D D + + + F + + + AEF +DMA L
Sbjct: 62 VTYVRN-YTDVDDKIINRANKEGVPFNVISERFIAEFDRDMAAL 104
>TIGR_CMR|GSU_3365 [details] [associations]
symbol:GSU_3365 "cysteinyl-tRNA synthetase" species:243231
"Geobacter sulfurreducens PCA" [GO:0004817 "cysteine-tRNA ligase
activity" evidence=ISS] [GO:0006423 "cysteinyl-tRNA aminoacylation"
evidence=ISS] HAMAP:MF_00041 InterPro:IPR009080 InterPro:IPR015273
InterPro:IPR015803 Pfam:PF09190 PROSITE:PS00178 SMART:SM00840
Pfam:PF01406 GO:GO:0005829 GO:GO:0005524 GO:GO:0046872
EMBL:AE017180 GenomeReviews:AE017180_GR Gene3D:3.40.50.620
InterPro:IPR014729 SUPFAM:SSF47323 eggNOG:COG0215
InterPro:IPR024909 PANTHER:PTHR10890 PRINTS:PR00983 GO:GO:0004817
GO:GO:0006423 KO:K01883 TIGRFAMs:TIGR00435 HOGENOM:HOG000245250
OMA:DFDALNM ProtClustDB:PRK00260 RefSeq:NP_954405.1
ProteinModelPortal:Q747A2 GeneID:2688225 KEGG:gsu:GSU3365
PATRIC:22029585 BioCyc:GSUL243231:GH27-3315-MONOMER Uniprot:Q747A2
Length = 481
Score = 287 (106.1 bits), Expect = 1.8e-28, Sum P(2) = 1.8e-28
Identities = 48/70 (68%), Positives = 55/70 (78%)
Query: 787 EKRSPNDFALWKKSKAGEPWWSSPWGEGRPGWHIECSVMASAVLGPQLDIHTGGVDLKFP 846
+KR P DFALWK SK GEP+W SPWG+GRPGWHIECS M+ LG DIH GG DL FP
Sbjct: 174 KKRHPMDFALWKGSKPGEPYWDSPWGQGRPGWHIECSAMSMKYLGETFDIHGGGKDLVFP 233
Query: 847 HHDNELAQAE 856
HH+NE+AQ+E
Sbjct: 234 HHENEIAQSE 243
Score = 102 (41.0 bits), Expect = 1.8e-28, Sum P(2) = 1.8e-28
Identities = 19/43 (44%), Positives = 30/43 (69%)
Query: 121 PTVLTRVSEYIPEIVASYIEKIIANGLAYESNGSVYFNVNAFD 163
PT + +E+I E++ IE+++A G AY ++G VYF+V AFD
Sbjct: 109 PTYQPKATEHIAEMI-QVIERLVAKGFAYAADGDVYFSVEAFD 150
Score = 92 (37.4 bits), Expect = 2.0e-27, Sum P(2) = 2.0e-27
Identities = 20/55 (36%), Positives = 32/55 (58%)
Query: 434 KSYITFDILRRILSEYFNYNITYAMNITDIDDKIIKRARQ-----NYLFEKHVQE 483
++ + FD++ R L + Y +TY N TD+DDKII RA + N + E+ + E
Sbjct: 43 RANVVFDMIYRYL-RHAGYEVTYVRNYTDVDDKIINRANKEGVPFNVISERFIAE 96
Score = 63 (27.2 bits), Expect = 2.1e-24, Sum P(2) = 2.1e-24
Identities = 18/63 (28%), Positives = 34/63 (53%)
Query: 599 LTAVRDPLSDWLDSLHGSSITDNSIFATLPKHWEAEFHKDMADLNVLPPTVLTRVSEYIP 658
+T VR+ +D D + + + F + + + AEF +DMA L + PT + +E+I
Sbjct: 62 VTYVRN-YTDVDDKIINRANKEGVPFNVISERFIAEFDRDMAALGLDLPTYQPKATEHIA 120
Query: 659 EIV 661
E++
Sbjct: 121 EMI 123
Score = 43 (20.2 bits), Expect = 2.6e-22, Sum P(2) = 2.6e-22
Identities = 13/44 (29%), Positives = 24/44 (54%)
Query: 552 LTAVRDPFSDWLDSLHGSSITDNSIFATLPKHWEAEFHKDMADL 595
+T VR+ ++D D + + + F + + + AEF +DMA L
Sbjct: 62 VTYVRN-YTDVDDKIINRANKEGVPFNVISERFIAEFDRDMAAL 104
>UNIPROTKB|P21888 [details] [associations]
symbol:cysS species:83333 "Escherichia coli K-12"
[GO:0008270 "zinc ion binding" evidence=IDA;IPI] [GO:0046872 "metal
ion binding" evidence=IEA;IPI] [GO:0005524 "ATP binding"
evidence=IEA;IPI] [GO:0004812 "aminoacyl-tRNA ligase activity"
evidence=IDA] [GO:0016874 "ligase activity" evidence=IDA]
[GO:0004817 "cysteine-tRNA ligase activity" evidence=IEA;IDA]
[GO:0006423 "cysteinyl-tRNA aminoacylation" evidence=IEA;IDA]
[GO:0005829 "cytosol" evidence=IBA] [GO:0006412 "translation"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] HAMAP:MF_00041
InterPro:IPR009080 InterPro:IPR015273 InterPro:IPR015803
Pfam:PF09190 PROSITE:PS00178 SMART:SM00840 Pfam:PF01406
GO:GO:0005829 GO:GO:0005524 EMBL:U00096 EMBL:AP009048
GenomeReviews:AP009048_GR GenomeReviews:U00096_GR GO:GO:0046872
GO:GO:0008270 EMBL:U82664 Gene3D:3.40.50.620 InterPro:IPR014729
SUPFAM:SSF47323 eggNOG:COG0215 InterPro:IPR024909 PANTHER:PTHR10890
PRINTS:PR00983 GO:GO:0004817 GO:GO:0006423 EMBL:X59293 KO:K01883
TIGRFAMs:TIGR00435 HOGENOM:HOG000245250 OMA:DFDALNM
ProtClustDB:PRK00260 EMBL:X56234 EMBL:M59381 PIR:A37868
RefSeq:NP_415059.1 RefSeq:YP_488815.1 PDB:1LI5 PDB:1LI7 PDB:1U0B
PDBsum:1LI5 PDBsum:1LI7 PDBsum:1U0B ProteinModelPortal:P21888
SMR:P21888 DIP:DIP-9386N IntAct:P21888 MINT:MINT-1240309
PRIDE:P21888 EnsemblBacteria:EBESCT00000001969
EnsemblBacteria:EBESCT00000015968 GeneID:12933021 GeneID:946969
KEGG:ecj:Y75_p0512 KEGG:eco:b0526 PATRIC:32116212 EchoBASE:EB0193
EcoGene:EG10196 BioCyc:EcoCyc:CYSS-MONOMER
BioCyc:ECOL316407:JW0515-MONOMER BioCyc:MetaCyc:CYSS-MONOMER
SABIO-RK:P21888 EvolutionaryTrace:P21888 Genevestigator:P21888
Uniprot:P21888
Length = 461
Score = 270 (100.1 bits), Expect = 2.8e-28, Sum P(2) = 2.8e-28
Identities = 46/69 (66%), Positives = 51/69 (73%)
Query: 787 EKRSPNDFALWKKSKAGEPWWSSPWGEGRPGWHIECSVMASAVLGPQLDIHTGGVDLKFP 846
+KR+P DF LWK SK GEP W SPWG GRPGWHIECS M LG DIH GG DL FP
Sbjct: 174 DKRNPMDFVLWKMSKEGEPSWPSPWGAGRPGWHIECSAMNCKQLGNHFDIHGGGSDLMFP 233
Query: 847 HHDNELAQA 855
HH+NE+AQ+
Sbjct: 234 HHENEIAQS 242
Score = 118 (46.6 bits), Expect = 2.8e-28, Sum P(2) = 2.8e-28
Identities = 21/42 (50%), Positives = 30/42 (71%)
Query: 433 GKSYITFDILRRILSEYFNYNITYAMNITDIDDKIIKRARQN 474
G++++ FD++ R L + Y + Y NITDIDDKIIKRA +N
Sbjct: 41 GRTFVAFDVVARYL-RFLGYKLKYVRNITDIDDKIIKRANEN 81
Score = 75 (31.5 bits), Expect = 8.7e-24, Sum P(2) = 8.7e-24
Identities = 20/57 (35%), Positives = 32/57 (56%)
Query: 105 KMETDKYSQFDE-TVLPPTVLTRVSEYIPEIVASYIEKIIANGLAYES-NGSVYFNV 159
+M + + FD +L P + R + +I EI+ E++IA G AY + NG V F+V
Sbjct: 91 RMIAEMHKDFDALNILRPDMEPRATHHIAEII-ELTEQLIAKGHAYVADNGDVMFDV 146
Score = 68 (29.0 bits), Expect = 4.7e-23, Sum P(2) = 4.7e-23
Identities = 19/63 (30%), Positives = 31/63 (49%)
Query: 599 LTAVRDPLSDWLDSLHGSSITDNSIFATLPKHWEAEFHKDMADLNVLPPTVLTRVSEYIP 658
L VR+ ++D D + + + F + AE HKD LN+L P + R + +I
Sbjct: 61 LKYVRN-ITDIDDKIIKRANENGESFVAMVDRMIAEMHKDFDALNILRPDMEPRATHHIA 119
Query: 659 EIV 661
EI+
Sbjct: 120 EII 122
>TIGR_CMR|CPS_3792 [details] [associations]
symbol:CPS_3792 "cysteinyl-tRNA synthetase" species:167879
"Colwellia psychrerythraea 34H" [GO:0004817 "cysteine-tRNA ligase
activity" evidence=ISS] [GO:0006423 "cysteinyl-tRNA aminoacylation"
evidence=ISS] HAMAP:MF_00041 InterPro:IPR009080 InterPro:IPR015273
InterPro:IPR015803 Pfam:PF09190 PROSITE:PS00178 SMART:SM00840
Pfam:PF01406 GO:GO:0005524 GO:GO:0005737 GO:GO:0046872
EMBL:CP000083 GenomeReviews:CP000083_GR Gene3D:3.40.50.620
InterPro:IPR014729 SUPFAM:SSF47323 eggNOG:COG0215
InterPro:IPR024909 PANTHER:PTHR10890 PRINTS:PR00983 GO:GO:0004817
GO:GO:0006423 KO:K01883 TIGRFAMs:TIGR00435 HOGENOM:HOG000245250
OMA:DFDALNM ProtClustDB:PRK00260 RefSeq:YP_270455.1
ProteinModelPortal:Q47XL5 SMR:Q47XL5 STRING:Q47XL5 GeneID:3520703
KEGG:cps:CPS_3792 PATRIC:21470497
BioCyc:CPSY167879:GI48-3810-MONOMER Uniprot:Q47XL5
Length = 469
Score = 273 (101.2 bits), Expect = 9.6e-28, Sum P(2) = 9.6e-28
Identities = 46/68 (67%), Positives = 52/68 (76%)
Query: 788 KRSPNDFALWKKSKAGEPWWSSPWGEGRPGWHIECSVMASAVLGPQLDIHTGGVDLKFPH 847
K +P DF LWK +K GEP WSSPWGEGRPGWHIECS M + LG DIH GG DL FPH
Sbjct: 182 KNNPLDFVLWKSAKPGEPSWSSPWGEGRPGWHIECSAMNAKELGHHFDIHGGGSDLTFPH 241
Query: 848 HDNELAQA 855
H+NE+AQ+
Sbjct: 242 HENEIAQS 249
Score = 110 (43.8 bits), Expect = 9.6e-28, Sum P(2) = 9.6e-28
Identities = 20/42 (47%), Positives = 30/42 (71%)
Query: 433 GKSYITFDILRRILSEYFNYNITYAMNITDIDDKIIKRARQN 474
G++YI+FD + R L + Y++ Y NITD++DKII RA +N
Sbjct: 41 GRTYISFDNIARYL-RFSGYDVNYVRNITDVEDKIINRANEN 81
Score = 56 (24.8 bits), Expect = 4.2e-22, Sum P(2) = 4.2e-22
Identities = 16/60 (26%), Positives = 30/60 (50%)
Query: 602 VRDPLSDWLDSLHGSSITDNSIFATLPKHWEAEFHKDMADLNVLPPTVLTRVSEYIPEIV 661
VR+ ++D D + + +N L + A H+D LN+ P + RV+ ++ EI+
Sbjct: 64 VRN-ITDVEDKIINRANENNETTEALTERTIAAMHQDFDSLNMARPDLEPRVTTHMNEII 122
>UNIPROTKB|A9WG64 [details] [associations]
symbol:cysS "Cysteine--tRNA ligase" species:324602
"Chloroflexus aurantiacus J-10-fl" [GO:0004817 "cysteine-tRNA
ligase activity" evidence=ISS] [GO:0005829 "cytosol" evidence=ISS]
[GO:0006423 "cysteinyl-tRNA aminoacylation" evidence=ISS]
HAMAP:MF_00041 InterPro:IPR009080 InterPro:IPR015273
InterPro:IPR015803 Pfam:PF09190 SMART:SM00840 Pfam:PF01406
GO:GO:0005829 GO:GO:0005524 GO:GO:0046872 GO:GO:0008270
Gene3D:3.40.50.620 InterPro:IPR014729 EMBL:CP000909
GenomeReviews:CP000909_GR SUPFAM:SSF47323 eggNOG:COG0215
HOGENOM:HOG000245251 KO:K15526 OMA:DVHYVQN InterPro:IPR024909
PANTHER:PTHR10890 PRINTS:PR00983 GO:GO:0004817 GO:GO:0006423
TIGRFAMs:TIGR00435 RefSeq:YP_001634374.1 ProteinModelPortal:A9WG64
STRING:A9WG64 GeneID:5824820 KEGG:cau:Caur_0747 PATRIC:21412149
ProtClustDB:CLSK974693 BioCyc:CAUR324602:GIXU-758-MONOMER
Uniprot:A9WG64
Length = 398
Score = 255 (94.8 bits), Expect = 9.7e-28, Sum P(3) = 9.7e-28
Identities = 43/69 (62%), Positives = 49/69 (71%)
Query: 788 KRSPNDFALWKKSKAGEPWWSSPWGEGRPGWHIECSVMASAVLGPQLDIHTGGVDLKFPH 847
KR P DF LW++ EP W SPWG GRPGWHIECS M+ LG Q+DIH GG DL FPH
Sbjct: 177 KRDPLDFVLWQRGNPDEPKWESPWGLGRPGWHIECSAMSQRYLGEQIDIHGGGADLIFPH 236
Query: 848 HDNELAQAE 856
H E+AQ+E
Sbjct: 237 HSCEIAQSE 245
Score = 89 (36.4 bits), Expect = 9.7e-28, Sum P(3) = 9.7e-28
Identities = 17/54 (31%), Positives = 34/54 (62%)
Query: 434 KSYITFDILRRILSEYFNYNITYAMNITDIDDKIIKRARQNYLFEKHVQENEIQ 487
+++I FD+L R L ++ + Y N+TD+DD + +RAR++ + + E +I+
Sbjct: 41 RTFIVFDVLVRYL-QWQGATVRYCQNVTDVDDPLFERARRDGVQWDELAERQIR 93
Score = 88 (36.0 bits), Expect = 4.7e-24, Sum P(2) = 4.7e-24
Identities = 19/45 (42%), Positives = 29/45 (64%)
Query: 115 DETVLPPTVLTRVSEYIPEIVASYIEKIIANGLAYESNGSVYFNV 159
D +LPPT RVSE + ++ IE++I G AY +G+VYF++
Sbjct: 101 DLNILPPTFFPRVSEEVGTMIP-IIERLIELGHAYVVDGNVYFSI 144
Score = 70 (29.7 bits), Expect = 9.7e-28, Sum P(3) = 9.7e-28
Identities = 13/28 (46%), Positives = 18/28 (64%)
Query: 634 EFHKDMADLNVLPPTVLTRVSEYIPEIV 661
+ D ADLN+LPPT RVSE + ++
Sbjct: 94 QLRADCADLNILPPTFFPRVSEEVGTMI 121
>RGD|1311612 [details] [associations]
symbol:Cars2 "cysteinyl-tRNA synthetase 2, mitochondrial"
species:10116 "Rattus norvegicus" [GO:0004817 "cysteine-tRNA ligase
activity" evidence=IBA] [GO:0005829 "cytosol" evidence=IBA]
[GO:0006423 "cysteinyl-tRNA aminoacylation" evidence=IBA]
Pfam:PF01406 RGD:1311612 GO:GO:0005829 Gene3D:3.40.50.620
InterPro:IPR014729 InterPro:IPR024909 PANTHER:PTHR10890
PRINTS:PR00983 GO:GO:0004817 GO:GO:0006423 IPI:IPI00557944
Ensembl:ENSRNOT00000044033 UCSC:RGD:1311612 ArrayExpress:F1M2J0
Uniprot:F1M2J0
Length = 268
Score = 178 (67.7 bits), Expect = 1.0e-27, Sum P(3) = 1.0e-27
Identities = 29/47 (61%), Positives = 36/47 (76%)
Query: 786 SEKRSPNDFALWKKSKAGEPWWSSPWGEGRPGWHIECSVMASAVLGP 832
S+KR +DFALWK +K E +W+SPWG+GRPGWHIECS MA + P
Sbjct: 211 SDKRHSSDFALWKGAKPQEVFWASPWGDGRPGWHIECSAMARVLTAP 257
Score = 130 (50.8 bits), Expect = 1.0e-27, Sum P(3) = 1.0e-27
Identities = 24/39 (61%), Positives = 31/39 (79%)
Query: 435 SYITFDILRRILSEYFNYNITYAMNITDIDDKIIKRARQ 473
SY+ FDI+RRIL+ F N+ AM+ITD+DDKIIKRA +
Sbjct: 83 SYVRFDIIRRILTSVFGCNVVMAMSITDVDDKIIKRANE 121
Score = 118 (46.6 bits), Expect = 1.5e-19, Sum P(2) = 1.5e-19
Identities = 32/80 (40%), Positives = 49/80 (61%)
Query: 98 IPPSEMFKMETDKYSQFDET--VLPPTVLTRVSEYIPEIVASYIEKIIANGLAYES-NGS 154
+ P+ + + +++ Q VLPPTV RV+E IP+I+ S+I+ IIA+G AY + GS
Sbjct: 124 VSPASLASLFEEEFKQDMAALKVLPPTVYLRVTENIPQII-SFIQGIIAHGHAYATATGS 182
Query: 155 VYFNVNAFDSQPNHYYAKLV 174
VYF++ A + Y KLV
Sbjct: 183 VYFDLRARGDK----YGKLV 198
Score = 100 (40.3 bits), Expect = 1.0e-27, Sum P(3) = 1.0e-27
Identities = 21/37 (56%), Positives = 27/37 (72%)
Query: 625 ATLPKHWEAEFHKDMADLNVLPPTVLTRVSEYIPEIV 661
A+L +E EF +DMA L VLPPTV RV+E IP+I+
Sbjct: 127 ASLASLFEEEFKQDMAALKVLPPTVYLRVTENIPQII 163
Score = 40 (19.1 bits), Expect = 1.6e-21, Sum P(3) = 1.6e-21
Identities = 10/21 (47%), Positives = 13/21 (61%)
Query: 578 ATLPKHWEAEFHKDMADLNKL 598
A+L +E EF +DMA L L
Sbjct: 127 ASLASLFEEEFKQDMAALKVL 147
>TIGR_CMR|CHY_2338 [details] [associations]
symbol:CHY_2338 "cysteinyl-tRNA synthetase" species:246194
"Carboxydothermus hydrogenoformans Z-2901" [GO:0004817
"cysteine-tRNA ligase activity" evidence=ISS] [GO:0006423
"cysteinyl-tRNA aminoacylation" evidence=ISS] HAMAP:MF_00041
InterPro:IPR009080 InterPro:IPR015273 InterPro:IPR015803
Pfam:PF09190 PROSITE:PS00178 SMART:SM00840 Pfam:PF01406
GO:GO:0005524 GO:GO:0005737 GO:GO:0046872 EMBL:CP000141
GenomeReviews:CP000141_GR Gene3D:3.40.50.620 InterPro:IPR014729
SUPFAM:SSF47323 eggNOG:COG0215 InterPro:IPR024909 PANTHER:PTHR10890
PRINTS:PR00983 GO:GO:0004817 GO:GO:0006423 KO:K01883
TIGRFAMs:TIGR00435 HOGENOM:HOG000245250 OMA:DFDALNM
RefSeq:YP_361143.1 ProteinModelPortal:Q3A9P1 STRING:Q3A9P1
GeneID:3728054 KEGG:chy:CHY_2338 PATRIC:21277743
BioCyc:CHYD246194:GJCN-2337-MONOMER Uniprot:Q3A9P1
Length = 465
Score = 287 (106.1 bits), Expect = 1.3e-27, Sum P(2) = 1.3e-27
Identities = 47/70 (67%), Positives = 56/70 (80%)
Query: 787 EKRSPNDFALWKKSKAGEPWWSSPWGEGRPGWHIECSVMASAVLGPQLDIHTGGVDLKFP 846
+K++P DFALWKK+K GEP+W SPWG GRPGWHIECS M+ LG DIH GG DL FP
Sbjct: 172 KKKNPLDFALWKKAKPGEPYWESPWGPGRPGWHIECSAMSLKYLGENFDIHGGGADLVFP 231
Query: 847 HHDNELAQAE 856
HH+NE+AQ+E
Sbjct: 232 HHENEVAQSE 241
Score = 92 (37.4 bits), Expect = 1.3e-27, Sum P(2) = 1.3e-27
Identities = 19/41 (46%), Positives = 29/41 (70%)
Query: 122 TVLTRVSEYIPEIVASYIEKIIANGLAYESNGSVYFNVNAF 162
TV +V+E+IPEI+ ++ +I G AYE G+VYF V++F
Sbjct: 108 TVHPKVTEHIPEII-EMVKGLIEKGYAYEVEGNVYFAVDSF 147
Score = 90 (36.7 bits), Expect = 2.2e-27, Sum P(2) = 2.2e-27
Identities = 28/89 (31%), Positives = 44/89 (49%)
Query: 437 ITFDILRRILSEYFNYNITYAMNITDIDDKIIKRARQNYLFEKHV-QENEIQTSKILKDI 495
+ FD +RR EY + + Y N TDIDDKII RA + + + Q+ I+ K +
Sbjct: 44 VFFDTVRRYF-EYKGFEVIYVQNFTDIDDKIINRALEEGISPIELGQKYIIEYFKDADRL 102
Query: 496 GEVMGAFESKMKLVTD--PDKLTMMKNIL 522
G K VT+ P+ + M+K ++
Sbjct: 103 GVKRATVHPK---VTEHIPEIIEMVKGLI 128
Score = 58 (25.5 bits), Expect = 4.8e-24, Sum P(2) = 4.8e-24
Identities = 13/28 (46%), Positives = 18/28 (64%)
Query: 634 EFHKDMADLNVLPPTVLTRVSEYIPEIV 661
E+ KD L V TV +V+E+IPEI+
Sbjct: 94 EYFKDADRLGVKRATVHPKVTEHIPEII 121
>TIGR_CMR|BA_0089 [details] [associations]
symbol:BA_0089 "cysteinyl-tRNA synthetase" species:198094
"Bacillus anthracis str. Ames" [GO:0004817 "cysteine-tRNA ligase
activity" evidence=ISS] [GO:0006423 "cysteinyl-tRNA aminoacylation"
evidence=ISS] HAMAP:MF_00041 InterPro:IPR009080 InterPro:IPR015273
InterPro:IPR015803 Pfam:PF09190 PROSITE:PS00178 SMART:SM00840
Pfam:PF01406 GO:GO:0005524 GO:GO:0005737 GO:GO:0046872
EMBL:AE016879 EMBL:AE017334 EMBL:AE017225 GenomeReviews:AE016879_GR
GenomeReviews:AE017225_GR GenomeReviews:AE017334_GR
Gene3D:3.40.50.620 InterPro:IPR014729 SUPFAM:SSF47323
eggNOG:COG0215 InterPro:IPR024909 PANTHER:PTHR10890 PRINTS:PR00983
GO:GO:0004817 GO:GO:0006423 KO:K01883 TIGRFAMs:TIGR00435
HOGENOM:HOG000245250 OMA:DFDALNM ProtClustDB:PRK00260
RefSeq:NP_842657.1 RefSeq:YP_016693.1 RefSeq:YP_026375.1
ProteinModelPortal:Q81VV1 DNASU:1085927
EnsemblBacteria:EBBACT00000008203 EnsemblBacteria:EBBACT00000016398
EnsemblBacteria:EBBACT00000022610 GeneID:1085927 GeneID:2814899
GeneID:2849752 KEGG:ban:BA_0089 KEGG:bar:GBAA_0089 KEGG:bat:BAS0089
BioCyc:BANT260799:GJAJ-100-MONOMER
BioCyc:BANT261594:GJ7F-102-MONOMER Uniprot:Q81VV1
Length = 465
Score = 283 (104.7 bits), Expect = 2.0e-27, Sum P(2) = 2.0e-27
Identities = 49/76 (64%), Positives = 57/76 (75%)
Query: 784 EASEKRS-PNDFALWKKSKAGEPWWSSPWGEGRPGWHIECSVMASAVLGPQLDIHTGGVD 842
E EK+ P DFALWK +K GE +W SPWG+GRPGWHIECS MA LG +DIH GG D
Sbjct: 170 EVGEKKQDPLDFALWKAAKEGEIFWESPWGQGRPGWHIECSAMARKYLGDTIDIHAGGQD 229
Query: 843 LKFPHHDNELAQAEGL 858
L FPHH+NE+AQ+E L
Sbjct: 230 LAFPHHENEIAQSEAL 245
Score = 95 (38.5 bits), Expect = 2.0e-27, Sum P(2) = 2.0e-27
Identities = 18/37 (48%), Positives = 25/37 (67%)
Query: 437 ITFDILRRILSEYFNYNITYAMNITDIDDKIIKRARQ 473
+ FD +RR L EY Y++ Y N TD+DDK+IK A +
Sbjct: 46 MVFDTVRRYL-EYKGYDVQYVSNFTDVDDKLIKAANE 81
>UNIPROTKB|Q9L0Q6 [details] [associations]
symbol:cysS "Cysteine--tRNA ligase" species:100226
"Streptomyces coelicolor A3(2)" [GO:0004817 "cysteine-tRNA ligase
activity" evidence=ISS] [GO:0005829 "cytosol" evidence=ISS]
[GO:0006423 "cysteinyl-tRNA aminoacylation" evidence=ISS]
HAMAP:MF_00041 InterPro:IPR009080 InterPro:IPR015273
InterPro:IPR015803 Pfam:PF09190 PROSITE:PS00178 SMART:SM00840
Pfam:PF01406 GO:GO:0005829 GO:GO:0005524 GO:GO:0046872
GenomeReviews:AL645882_GR Gene3D:3.40.50.620 InterPro:IPR014729
SUPFAM:SSF47323 eggNOG:COG0215 InterPro:IPR024909 PANTHER:PTHR10890
PRINTS:PR00983 GO:GO:0004817 GO:GO:0006423 KO:K01883
TIGRFAMs:TIGR00435 HOGENOM:HOG000245250 ProtClustDB:PRK00260
OMA:STIEYSE EMBL:AL939119 RefSeq:NP_628409.1
ProteinModelPortal:Q9L0Q6 PhosSite:P1007965 GeneID:1099675
KEGG:sco:SCO4235 PATRIC:23738264 Uniprot:Q9L0Q6
Length = 613
Score = 278 (102.9 bits), Expect = 5.3e-27, Sum P(2) = 5.3e-27
Identities = 45/70 (64%), Positives = 54/70 (77%)
Query: 788 KRSPNDFALWKKSKAGEPWWSSPWGEGRPGWHIECSVMASAVLGPQLDIHTGGVDLKFPH 847
KR DFA+WK +K GEP W +PWG GRPGWH+ECS MA LG + DIH GG+DL FPH
Sbjct: 321 KRDLRDFAMWKAAKPGEPSWETPWGRGRPGWHLECSAMAHKYLGEEFDIHGGGIDLIFPH 380
Query: 848 HDNELAQAEG 857
H+NE+AQA+G
Sbjct: 381 HENEIAQAKG 390
Score = 105 (42.0 bits), Expect = 5.3e-27, Sum P(2) = 5.3e-27
Identities = 24/53 (45%), Positives = 35/53 (66%)
Query: 434 KSYITFDILRRILSEYFNYNITYAMNITDIDDKIIKRA-RQNYLFEKHVQENE 485
+S + FDI+RR + Y Y++T+ N+TDIDDKII++A QN + ENE
Sbjct: 190 RSGLNFDIMRRWFA-YRGYDVTFVRNVTDIDDKIIRKAAEQNRPWWSIGYENE 241
Score = 51 (23.0 bits), Expect = 2.3e-21, Sum P(2) = 2.3e-21
Identities = 18/63 (28%), Positives = 31/63 (49%)
Query: 599 LTAVRDPLSDWLDSLHGSSITDNSIFATLPKHWEAEFHKDMADLNVLPPTVLTRVSEYIP 658
+T VR+ ++D D + + N + ++ E F+ A L LPPT R + +I
Sbjct: 209 VTFVRN-VTDIDDKIIRKAAEQNRPWWSIGYENERAFNDAYAALGCLPPTYEPRATGHIT 267
Query: 659 EIV 661
E+V
Sbjct: 268 EMV 270
>UNIPROTKB|Q0IZQ2 [details] [associations]
symbol:Os09g0556500 "Os09g0556500 protein" species:39947
"Oryza sativa Japonica Group" [GO:0004817 "cysteine-tRNA ligase
activity" evidence=ISS] [GO:0005739 "mitochondrion" evidence=ISS]
[GO:0005829 "cytosol" evidence=ISS] [GO:0006423 "cysteinyl-tRNA
aminoacylation" evidence=ISS] [GO:0009507 "chloroplast"
evidence=ISS] HAMAP:MF_00041 InterPro:IPR009080 InterPro:IPR015273
InterPro:IPR015803 Pfam:PF09190 SMART:SM00840 Pfam:PF01406
GO:GO:0005829 GO:GO:0005739 GO:GO:0005524 GO:GO:0009507
GO:GO:0043067 GO:GO:0042407 EMBL:AP008215 EMBL:CM000146
Gene3D:3.40.50.620 InterPro:IPR014729 GO:GO:0010197 SUPFAM:SSF47323
InterPro:IPR024909 PANTHER:PTHR10890 PRINTS:PR00983 GO:GO:0004817
GO:GO:0006423 KO:K01883 TIGRFAMs:TIGR00435 RefSeq:NP_001063899.1
UniGene:Os.11564 STRING:Q0IZQ2 EnsemblPlants:LOC_Os09g38420.1
GeneID:4347821 KEGG:osa:4347821 OMA:ATHHTNE ProtClustDB:PLN02946
Uniprot:Q0IZQ2
Length = 569
Score = 269 (99.8 bits), Expect = 5.3e-27, Sum P(2) = 5.3e-27
Identities = 45/68 (66%), Positives = 53/68 (77%)
Query: 788 KRSPNDFALWKKSKAGEPWWSSPWGEGRPGWHIECSVMASAVLGPQLDIHTGGVDLKFPH 847
K++P DFALWK +K GEP W SPWG GRPGWHIECS M++ LG DIH GG DL FPH
Sbjct: 245 KKNPADFALWKAAKDGEPSWDSPWGPGRPGWHIECSAMSAHYLGHSFDIHGGGEDLIFPH 304
Query: 848 HDNELAQA 855
H+NE+AQ+
Sbjct: 305 HENEIAQS 312
Score = 113 (44.8 bits), Expect = 5.3e-27, Sum P(2) = 5.3e-27
Identities = 32/93 (34%), Positives = 49/93 (52%)
Query: 434 KSYITFDILRRILSEYFNYNITYAMNITDIDDKIIKRARQNYLFEKHVQENEIQTSKILK 493
++Y+ FD+L R L Y ++ + Y N TDIDDKII RA Q L E ++ + L
Sbjct: 113 RAYVAFDVLYRYL-RYLDHKVRYVRNFTDIDDKIIARANQ--LGEDPFSLSKRYSDDFLS 169
Query: 494 DIGEVMGAFESKMKLVTDP-DKL-TMMKNILSN 524
D+ + S V+D D++ M+K I+ N
Sbjct: 170 DMANLHCLPPSVEPRVSDHIDQIINMIKQIIDN 202
Score = 82 (33.9 bits), Expect = 9.3e-24, Sum P(2) = 9.3e-24
Identities = 16/36 (44%), Positives = 26/36 (72%)
Query: 626 TLPKHWEAEFHKDMADLNVLPPTVLTRVSEYIPEIV 661
+L K + +F DMA+L+ LPP+V RVS++I +I+
Sbjct: 158 SLSKRYSDDFLSDMANLHCLPPSVEPRVSDHIDQII 193
Score = 54 (24.1 bits), Expect = 7.8e-21, Sum P(2) = 7.8e-21
Identities = 15/45 (33%), Positives = 24/45 (53%)
Query: 579 TLPKHWEAEFHKDMADLNKLLTAVRDPLSDWLDSLHG--SSITDN 621
+L K + +F DMA+L+ L +V +SD +D + I DN
Sbjct: 158 SLSKRYSDDFLSDMANLHCLPPSVEPRVSDHIDQIINMIKQIIDN 202
>UNIPROTKB|Q97WE6 [details] [associations]
symbol:cysS "Cysteine--tRNA ligase" species:273057
"Sulfolobus solfataricus P2" [GO:0004817 "cysteine-tRNA ligase
activity" evidence=ISS] [GO:0005829 "cytosol" evidence=ISS]
[GO:0006423 "cysteinyl-tRNA aminoacylation" evidence=ISS]
HAMAP:MF_00041 InterPro:IPR009080 InterPro:IPR015273
InterPro:IPR015803 Pfam:PF09190 PROSITE:PS00178 SMART:SM00840
Pfam:PF01406 GO:GO:0005829 GO:GO:0005524 GO:GO:0046872
EMBL:AE006641 GenomeReviews:AE006641_GR Gene3D:3.40.50.620
InterPro:IPR014729 SUPFAM:SSF47323 eggNOG:COG0215
InterPro:IPR024909 PANTHER:PTHR10890 PRINTS:PR00983 GO:GO:0004817
GO:GO:0006423 KO:K01883 TIGRFAMs:TIGR00435 HOGENOM:HOG000245250
ProtClustDB:PRK00260 PIR:C90398 RefSeq:NP_343652.1
ProteinModelPortal:Q97WE6 GeneID:1453769 KEGG:sso:SSO2280
OMA:HGEFLIM Uniprot:Q97WE6
Length = 470
Score = 277 (102.6 bits), Expect = 1.5e-26, Sum P(2) = 1.5e-26
Identities = 47/72 (65%), Positives = 54/72 (75%)
Query: 787 EKRSPNDFALWKKSKAGEPWWSSPWGEGRPGWHIECSVMASAVLGPQLDIHTGGVDLKFP 846
EK+ DFALWK K GEP+W SPWG+GRPGWHIECS M++ LG + DIH GG DL FP
Sbjct: 174 EKKHSYDFALWKAWKPGEPYWESPWGKGRPGWHIECSTMSTRYLGERFDIHGGGADLIFP 233
Query: 847 HHDNELAQAEGL 858
HH+NE AQ E L
Sbjct: 234 HHENERAQTEAL 245
Score = 94 (38.1 bits), Expect = 1.5e-26, Sum P(2) = 1.5e-26
Identities = 32/110 (29%), Positives = 53/110 (48%)
Query: 433 GKSYITFDILRRILSEYFNYNITYAMNITDIDDKIIKRARQNYLFEKHVQENEIQTSKIL 492
G++++ FD + R L Y + NITDIDDKIIK++++ K NEI
Sbjct: 44 GRTFVVFDAISRYL-RLRGYTVIRVQNITDIDDKIIKKSQE---IGK--DWNEI-VDYFT 96
Query: 493 KDIGEVMGAFESKMKLVTDPDKLTMMKNILSNVQEA--KQDISAQPEGTI 540
KD +++ + K+K+ P ++ I+ VQ K P G++
Sbjct: 97 KDYLDMLS--QLKVKIDIHPRVTQHIREIIDFVQRLIDKGHAYVAPSGSV 144
Score = 78 (32.5 bits), Expect = 7.3e-25, Sum P(2) = 7.3e-25
Identities = 18/44 (40%), Positives = 32/44 (72%)
Query: 126 RVSEYIPEIVASYIEKIIANGLAYES-NGSVYFNVNAFDSQPNH 168
RV+++I EI+ +++++I G AY + +GSVYF+V D+ PN+
Sbjct: 115 RVTQHIREII-DFVQRLIDKGHAYVAPSGSVYFDV---DTYPNY 154
>UNIPROTKB|Q06752 [details] [associations]
symbol:cysS "Cysteine--tRNA ligase" species:224308
"Bacillus subtilis subsp. subtilis str. 168" [GO:0004817
"cysteine-tRNA ligase activity" evidence=ISS] [GO:0005829 "cytosol"
evidence=ISS] [GO:0006423 "cysteinyl-tRNA aminoacylation"
evidence=ISS] HAMAP:MF_00041 InterPro:IPR009080 InterPro:IPR015273
InterPro:IPR015803 Pfam:PF09190 PROSITE:PS00178 SMART:SM00840
Pfam:PF01406 GO:GO:0005829 GO:GO:0005524 GO:GO:0046872
EMBL:AL009126 GenomeReviews:AL009126_GR Gene3D:3.40.50.620
InterPro:IPR014729 SUPFAM:SSF47323 EMBL:D26185 eggNOG:COG0215
InterPro:IPR024909 PANTHER:PTHR10890 PRINTS:PR00983 GO:GO:0004817
GO:GO:0006423 KO:K01883 TIGRFAMs:TIGR00435 HOGENOM:HOG000245250
OMA:DFDALNM ProtClustDB:PRK00260 EMBL:L14580 EMBL:X73989 PIR:C53402
RefSeq:NP_387975.1 ProteinModelPortal:Q06752 SMR:Q06752
PhosSite:P0802198 EnsemblBacteria:EBBACT00000000180 GeneID:936859
KEGG:bsu:BSU00940 PATRIC:18971697 GenoList:BSU00940
BioCyc:BSUB:BSU00940-MONOMER Uniprot:Q06752
Length = 466
Score = 271 (100.5 bits), Expect = 7.4e-26, Sum P(2) = 7.4e-26
Identities = 46/72 (63%), Positives = 53/72 (73%)
Query: 787 EKRSPNDFALWKKSKAGEPWWSSPWGEGRPGWHIECSVMASAVLGPQLDIHTGGVDLKFP 846
+K DFALWK +K GE W SPWG+GRPGWHIECS M LG Q+DIH GG DL FP
Sbjct: 174 KKEDALDFALWKAAKEGEISWDSPWGKGRPGWHIECSAMVKKYLGDQIDIHAGGQDLTFP 233
Query: 847 HHDNELAQAEGL 858
HH+NE+AQ+E L
Sbjct: 234 HHENEIAQSEAL 245
Score = 94 (38.1 bits), Expect = 7.4e-26, Sum P(2) = 7.4e-26
Identities = 31/105 (29%), Positives = 51/105 (48%)
Query: 437 ITFDILRRILSEYFNYNITYAMNITDIDDKIIKRARQNYLFEKHVQENEIQTSKILKDIG 496
I +D +R L EY Y++ Y N TD+DDK+IK A N L E +E +D+G
Sbjct: 46 IVYDTVRNYL-EYKGYDVQYVSNFTDVDDKLIKAA--NELGEDVPTISERFIKAYFEDVG 102
Query: 497 EVMGAFESKMKLVTDPDKLTMMKNILSNVQE-AKQDISAQPEGTI 540
+G ++ + P + M I+ V + K+ + + EG +
Sbjct: 103 -ALGCRKADLH----PRVMENMDAIIEFVDQLVKKGYAYESEGDV 142
>UNIPROTKB|P0A634 [details] [associations]
symbol:cysS "Cysteine--tRNA ligase" species:1773
"Mycobacterium tuberculosis" [GO:0005829 "cytosol" evidence=IDA]
[GO:0040007 "growth" evidence=IMP] HAMAP:MF_00041
InterPro:IPR009080 InterPro:IPR015273 InterPro:IPR015803
Pfam:PF09190 PROSITE:PS00178 SMART:SM00840 Pfam:PF01406
GO:GO:0005829 GO:GO:0005524 GO:GO:0040007 EMBL:AE000516
GenomeReviews:AE000516_GR GenomeReviews:AL123456_GR GO:GO:0046872
EMBL:BX842583 Gene3D:3.40.50.620 InterPro:IPR014729 SUPFAM:SSF47323
eggNOG:COG0215 InterPro:IPR024909 PANTHER:PTHR10890 PRINTS:PR00983
GO:GO:0004817 GO:GO:0006423 KO:K01883 TIGRFAMs:TIGR00435
HOGENOM:HOG000245250 ProtClustDB:PRK00260 PIR:B70607
RefSeq:NP_338230.1 RefSeq:YP_006517070.1 RefSeq:YP_177992.1
ProteinModelPortal:P0A634 SMR:P0A634 PRIDE:P0A634
EnsemblBacteria:EBMYCT00000000681 EnsemblBacteria:EBMYCT00000070720
GeneID:13317189 GeneID:888628 GeneID:922812 KEGG:mtc:MT3686
KEGG:mtu:Rv3580c KEGG:mtv:RVBD_3580c PATRIC:18129861
TubercuList:Rv3580c OMA:STIEYSE Uniprot:P0A634
Length = 469
Score = 278 (102.9 bits), Expect = 1.1e-25, Sum P(3) = 1.1e-25
Identities = 45/71 (63%), Positives = 54/71 (76%)
Query: 785 ASEKRSPNDFALWKKSKAGEPWWSSPWGEGRPGWHIECSVMASAVLGPQLDIHTGGVDLK 844
A+ KR DF LWK K GEP W +PWG GRPGWH+ECS MA + LGP+ DIH GG+DL
Sbjct: 174 AAGKRDQRDFTLWKGEKPGEPSWPTPWGRGRPGWHLECSAMARSYLGPEFDIHCGGMDLV 233
Query: 845 FPHHDNELAQA 855
FPHH+NE+AQ+
Sbjct: 234 FPHHENEIAQS 244
Score = 83 (34.3 bits), Expect = 1.1e-25, Sum P(3) = 1.1e-25
Identities = 17/38 (44%), Positives = 26/38 (68%)
Query: 434 KSYITFDILRRILSEYFNYNITYAMNITDIDDKIIKRA 471
+S + FDILRR L Y++ + N+TDI+DKI+ +A
Sbjct: 47 RSGVAFDILRRWLLAR-GYDVAFIRNVTDIEDKILAKA 83
Score = 39 (18.8 bits), Expect = 1.1e-25, Sum P(3) = 1.1e-25
Identities = 7/20 (35%), Positives = 14/20 (70%)
Query: 642 LNVLPPTVLTRVSEYIPEIV 661
L+VLPP+ R + +I +++
Sbjct: 108 LDVLPPSAEPRATGHITQMI 127
>TIGR_CMR|SPO_2131 [details] [associations]
symbol:SPO_2131 "cysteinyl-tRNA synthetase" species:246200
"Ruegeria pomeroyi DSS-3" [GO:0004817 "cysteine-tRNA ligase
activity" evidence=ISS] [GO:0006423 "cysteinyl-tRNA aminoacylation"
evidence=ISS] HAMAP:MF_00041 InterPro:IPR009080 InterPro:IPR015273
InterPro:IPR015803 Pfam:PF09190 PROSITE:PS00178 SMART:SM00840
Pfam:PF01406 GO:GO:0005524 GO:GO:0005737 EMBL:CP000031
GenomeReviews:CP000031_GR GO:GO:0046872 Gene3D:3.40.50.620
InterPro:IPR014729 SUPFAM:SSF47323 eggNOG:COG0215
InterPro:IPR024909 PANTHER:PTHR10890 PRINTS:PR00983 GO:GO:0004817
GO:GO:0006423 KO:K01883 TIGRFAMs:TIGR00435 HOGENOM:HOG000245250
RefSeq:YP_167359.1 ProteinModelPortal:Q5LRJ6 GeneID:3193717
KEGG:sil:SPO2131 PATRIC:23377605 OMA:QSCCAHP Uniprot:Q5LRJ6
Length = 465
Score = 253 (94.1 bits), Expect = 1.4e-24, Sum P(2) = 1.4e-24
Identities = 43/71 (60%), Positives = 50/71 (70%)
Query: 785 ASEKRSPNDFALWKKSKAGEPWWSSPWGEGRPGWHIECSVMASAVLGPQLDIHTGGVDLK 844
A K++P DF LWK S P W SPWG GRPGWHIECS M+ +LG DIH GG DL
Sbjct: 176 APYKKNPMDFVLWKPSTPDLPGWDSPWGRGRPGWHIECSAMSYELLGESFDIHGGGNDLM 235
Query: 845 FPHHDNELAQA 855
FPHH+NE+AQ+
Sbjct: 236 FPHHENEIAQS 246
Score = 102 (41.0 bits), Expect = 1.4e-24, Sum P(2) = 1.4e-24
Identities = 30/78 (38%), Positives = 40/78 (51%)
Query: 119 LPPTVLTRVSEYIPEIVASYIEKIIANGLAYESNGSVYFNVNAFDSQPNHYYAKLVPEAY 178
L P + R ++YIP++VA IE+++A G AYE+ G V F A DS HY KL +
Sbjct: 110 LEPDHMPRATQYIPQMVAM-IEELVAKGHAYEAEGHVLF---AVDSWKEHY-GKLSGRSV 164
Query: 179 GDTKTLQEGEVRGYPPWP 196
D EV Y P
Sbjct: 165 DDMIAGARVEVAPYKKNP 182
Score = 102 (41.0 bits), Expect = 1.4e-24, Sum P(2) = 1.4e-24
Identities = 34/116 (29%), Positives = 58/116 (50%)
Query: 414 DRLRDEVL-PNVGVRLEDIEGKSYITFDILRRILSEYFNYN-ITYAMNITDIDDKIIKRA 471
D +R V P V R G+ + FD+L R+L + + +TY N TD+DDKI RA
Sbjct: 23 DNVRMYVCGPTVYDRAHLGNGRPVVVFDVLYRLLRHVYGADHVTYVRNFTDVDDKINARA 82
Query: 472 RQNYLFEKHVQENEIQTSK-ILKDIGEVMGAFE-SKMKLVTD--PDKLTMMKNILS 523
+ + + + +T++ L D+G +GA E M T P + M++ +++
Sbjct: 83 AER---GRPIGDITAETTQWFLDDMG-ALGALEPDHMPRATQYIPQMVAMIEELVA 134
Score = 55 (24.4 bits), Expect = 1.2e-19, Sum P(2) = 1.2e-19
Identities = 11/27 (40%), Positives = 16/27 (59%)
Query: 635 FHKDMADLNVLPPTVLTRVSEYIPEIV 661
F DM L L P + R ++YIP++V
Sbjct: 100 FLDDMGALGALEPDHMPRATQYIPQMV 126
>DICTYBASE|DDB_G0277295 [details] [associations]
symbol:mcysS "putative mitochondrial cysteine-tRNA
ligase" species:44689 "Dictyostelium discoideum" [GO:0006423
"cysteinyl-tRNA aminoacylation" evidence=IEA;ISS;IBA] [GO:0006418
"tRNA aminoacylation for protein translation" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0004817 "cysteine-tRNA ligase activity"
evidence=IEA;ISS;IBA] [GO:0004812 "aminoacyl-tRNA ligase activity"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0005575 "cellular_component" evidence=ND] [GO:0005829 "cytosol"
evidence=IBA] [GO:0046872 "metal ion binding" evidence=IEA]
[GO:0016874 "ligase activity" evidence=IEA] [GO:0006412
"translation" evidence=IEA] [GO:0005739 "mitochondrion"
evidence=IEA] [GO:0005759 "mitochondrial matrix" evidence=IEA]
InterPro:IPR009080 InterPro:IPR015803 PROSITE:PS00178
dictyBase:DDB_G0277295 Pfam:PF01406 GO:GO:0005829 GO:GO:0005524
GO:GO:0005759 GO:GO:0046872 GenomeReviews:CM000151_GR
EMBL:AAFI02000019 Gene3D:3.40.50.620 InterPro:IPR014729
SUPFAM:SSF47323 eggNOG:COG0215 InterPro:IPR024909 PANTHER:PTHR10890
PRINTS:PR00983 GO:GO:0004817 GO:GO:0006423 HSSP:P21888 KO:K01883
TIGRFAMs:TIGR00435 ProtClustDB:PTZ00399 RefSeq:XP_642733.1
ProteinModelPortal:Q54ZY3 STRING:Q54ZY3 EnsemblProtists:DDB0231320
GeneID:8620927 KEGG:ddi:DDB_G0277295 OMA:SSSHIGH Uniprot:Q54ZY3
Length = 583
Score = 233 (87.1 bits), Expect = 1.3e-23, Sum P(3) = 1.3e-23
Identities = 42/79 (53%), Positives = 52/79 (65%)
Query: 787 EKRSPNDFALWKKSK-------AGEP-WWSSPWGEGRPGWHIECSVMASAVLGPQLDIHT 838
+K+S DF LWK G P W SP+G+GRPGWHIECS M ++ LD+H+
Sbjct: 228 DKKSSQDFVLWKAYNENIDIDGTGNPVCWDSPFGKGRPGWHIECSAMIDSIFKDHLDVHS 287
Query: 839 GGVDLKFPHHDNELAQAEG 857
GGVDL+FPHH NE+AQ EG
Sbjct: 288 GGVDLEFPHHQNEIAQCEG 306
Score = 124 (48.7 bits), Expect = 1.3e-23, Sum P(3) = 1.3e-23
Identities = 21/43 (48%), Positives = 33/43 (76%)
Query: 434 KSYITFDILRRILSEYFNYNITYAMNITDIDDKIIKRARQNYL 476
++Y+T DI++RIL YF +NI + M +TDIDDKII +++Q +
Sbjct: 96 RNYMTVDIIQRILINYFRFNIIHVMGLTDIDDKIINKSKQELI 138
Score = 120 (47.3 bits), Expect = 5.0e-11, Sum P(2) = 5.0e-11
Identities = 48/189 (25%), Positives = 87/189 (46%)
Query: 247 LSQKQQSLKLVVIMKEFFLNVKDHIRN-LKFPATTVSSFEKWTQADLELSTRFIQTKNNV 305
LS ++L+L + + FLN +R+ LK T+V+ +K +EL + +TK +
Sbjct: 373 LSFSDETLQLCISKEIKFLNWFKIVRSKLKLEQTSVNKVKKTFNHSIELLNQLSETKYLI 432
Query: 306 HAALCDNMDTRSALDSIRDCISQVNIYLRGTPNQLLLRDIGAYVTKILTVFGCIGDVKNI 365
L D+ +T S + + + Q N + LL ++ YV IL +FG +V +
Sbjct: 433 EKDLKDDFNTPSVIKRLELLMKQTNESMNSIDTDLLF-NVQDYVESILNIFGL--EVNSE 489
Query: 366 GFPLGGTGVESTNLEELVLPYLTILSEFRDNIRTEARLIKSTEILNQCDRLRDEVLPNVG 425
T + L E +L + + + N ++ + IKS +I D+LR + +
Sbjct: 490 ISDHNKTDESNQFLLEKLLDFRSDVKNLAKNEKSLDQ-IKS-KIYQITDQLRSDCQSEIS 547
Query: 426 VRLEDIEGK 434
+R+ DI K
Sbjct: 548 LRVSDIPDK 556
Score = 118 (46.6 bits), Expect = 2.0e-23, Sum P(2) = 2.0e-23
Identities = 31/67 (46%), Positives = 38/67 (56%)
Query: 98 IPPSEMFK-METDKYSQFDE-TVLPPTVLTRVSEYIPEIVASYIEKIIANGLAYESNGSV 155
I SE+ K E + + + PP TRVSE+I EI+ YIEKI N L YES SV
Sbjct: 138 ISASELSKKFEQEFFEDLKSLNIKPPMFTTRVSEHIDEII-KYIEKIKENQLTYESTKSV 196
Query: 156 YFNVNAF 162
F+VN F
Sbjct: 197 IFDVNKF 203
Score = 94 (38.1 bits), Expect = 6.4e-21, Sum P(2) = 6.4e-21
Identities = 22/56 (39%), Positives = 32/56 (57%)
Query: 606 LSDWLDSLHGSSITDNSIFATLPKHWEAEFHKDMADLNVLPPTVLTRVSEYIPEIV 661
L+D D + S + + L K +E EF +D+ LN+ PP TRVSE+I EI+
Sbjct: 122 LTDIDDKIINKSKQELISASELSKKFEQEFFEDLKSLNIKPPMFTTRVSEHIDEII 177
Score = 38 (18.4 bits), Expect = 1.3e-23, Sum P(3) = 1.3e-23
Identities = 13/58 (22%), Positives = 28/58 (48%)
Query: 476 LFEKHVQENEIQTSKILKDIGEVMGAFESKMKLVTDPDKLTMMK--NILSNVQEAKQD 531
+F V E+ + K ++ I E +ES ++ D +K + + ++ + Q+ K D
Sbjct: 164 MFTTRVSEHIDEIIKYIEKIKENQLTYESTKSVIFDVNKFGIDRYCSLRAANQQIKSD 221
>TIGR_CMR|NSE_0333 [details] [associations]
symbol:NSE_0333 "cysteinyl-tRNA synthetase" species:222891
"Neorickettsia sennetsu str. Miyayama" [GO:0004817 "cysteine-tRNA
ligase activity" evidence=ISS] [GO:0006423 "cysteinyl-tRNA
aminoacylation" evidence=ISS] HAMAP:MF_00041 InterPro:IPR009080
InterPro:IPR015273 InterPro:IPR015803 Pfam:PF09190 PROSITE:PS00178
SMART:SM00840 Pfam:PF01406 GO:GO:0005524 GO:GO:0005737
GO:GO:0046872 Gene3D:3.40.50.620 InterPro:IPR014729 EMBL:CP000237
GenomeReviews:CP000237_GR SUPFAM:SSF47323 eggNOG:COG0215
InterPro:IPR024909 PANTHER:PTHR10890 PRINTS:PR00983 GO:GO:0004817
GO:GO:0006423 KO:K01883 TIGRFAMs:TIGR00435 HOGENOM:HOG000245250
RefSeq:YP_506222.1 ProteinModelPortal:Q2GE74 STRING:Q2GE74
GeneID:3931752 KEGG:nse:NSE_0333 PATRIC:22680753 OMA:HIGNIRA
ProtClustDB:CLSK2527765 BioCyc:NSEN222891:GHFU-358-MONOMER
Uniprot:Q2GE74
Length = 507
Score = 246 (91.7 bits), Expect = 7.1e-23, Sum P(3) = 7.1e-23
Identities = 42/69 (60%), Positives = 47/69 (68%)
Query: 787 EKRSPNDFALWKKSKAGEPWWSSPWGEGRPGWHIECSVMASAVLGPQLDIHTGGVDLKFP 846
+K+ P DF LWK +W SPWG GRPGWHIECS M A LG DIH GG DLKFP
Sbjct: 174 DKKHPGDFILWKSDD--HVYWPSPWGNGRPGWHIECSAMTLATLGADFDIHGGGADLKFP 231
Query: 847 HHDNELAQA 855
HH+NE AQ+
Sbjct: 232 HHENERAQS 240
Score = 82 (33.9 bits), Expect = 2.0e-21, Sum P(2) = 2.0e-21
Identities = 18/44 (40%), Positives = 29/44 (65%)
Query: 119 LPPTVLTRVSEYIPEIVASYIEKIIANGLAYESNGSVYFNVNAF 162
L PTV + ++ I +++ S I+ +I NG AY G+VYF+V +F
Sbjct: 107 LSPTVEPKATQNIGKMI-SMIQALIDNGNAYSVGGNVYFDVGSF 149
Score = 80 (33.2 bits), Expect = 7.1e-23, Sum P(3) = 7.1e-23
Identities = 16/38 (42%), Positives = 25/38 (65%)
Query: 434 KSYITFDILRRILSEYFNYNITYAMNITDIDDKIIKRA 471
++ + +DI+ R+L + F + Y NITD+DDKII A
Sbjct: 43 RASVVYDIVYRVLLKLFP-EVIYVRNITDVDDKIITAA 79
Score = 56 (24.8 bits), Expect = 7.1e-23, Sum P(3) = 7.1e-23
Identities = 11/32 (34%), Positives = 20/32 (62%)
Query: 630 HWEAEFHKDMADLNVLPPTVLTRVSEYIPEIV 661
H+E FH+ + LN L PTV + ++ I +++
Sbjct: 92 HYEHIFHEHLGLLNCLSPTVEPKATQNIGKMI 123
>UNIPROTKB|Q3KKR0 [details] [associations]
symbol:cysS "Cysteine--tRNA ligase" species:315277
"Chlamydia trachomatis A/HAR-13" [GO:0004817 "cysteine-tRNA ligase
activity" evidence=ISS] [GO:0005829 "cytosol" evidence=ISS]
[GO:0006423 "cysteinyl-tRNA aminoacylation" evidence=ISS]
HAMAP:MF_00041 InterPro:IPR009080 InterPro:IPR015273
InterPro:IPR015803 Pfam:PF09190 PROSITE:PS00178 SMART:SM00840
Pfam:PF01406 GO:GO:0005829 GO:GO:0005524 GO:GO:0046872
Gene3D:3.40.50.620 InterPro:IPR014729 EMBL:CP000051
GenomeReviews:CP000051_GR SUPFAM:SSF47323 eggNOG:COG0215
InterPro:IPR024909 PANTHER:PTHR10890 PRINTS:PR00983 GO:GO:0004817
GO:GO:0006423 KO:K01883 TIGRFAMs:TIGR00435 HOGENOM:HOG000245250
ProtClustDB:PRK00260 RefSeq:YP_328610.1 ProteinModelPortal:Q3KKR0
STRING:Q3KKR0 GeneID:3687862 KEGG:cta:CTA_0852 PATRIC:32023650
BioCyc:CTRA315277:GI4C-863-MONOMER Uniprot:Q3KKR0
Length = 477
Score = 240 (89.5 bits), Expect = 1.7e-22, Sum P(3) = 1.7e-22
Identities = 44/80 (55%), Positives = 57/80 (71%)
Query: 784 EASEKRSPN--DFALWKK---SKAGEPWWSSPWGEGRPGWHIECSVMASAVLGPQLDIHT 838
+A E N DF LWK + GE +W SP+G+GRPGWH+ECS+M+ ++LG LDIH
Sbjct: 170 DADEYDKDNLCDFVLWKAYDPDRDGEIFWESPFGKGRPGWHLECSIMSISLLGQSLDIHA 229
Query: 839 GGVDLKFPHHDNELAQAEGL 858
GGVD FPHH+NE+AQ+E L
Sbjct: 230 GGVDNIFPHHENEIAQSESL 249
Score = 95 (38.5 bits), Expect = 1.7e-22, Sum P(3) = 1.7e-22
Identities = 20/50 (40%), Positives = 33/50 (66%)
Query: 434 KSYITFDILRRILSEYFNYNITYAMNITDIDDKIIKRARQNYL-FEKHVQ 482
++YI D+L+R+L + Y++ + MNITD+DDK + AR+ EK+ Q
Sbjct: 42 RTYIFEDLLKRVLL-FLGYSVYHVMNITDVDDKTLAGARKKGCSLEKYCQ 90
Score = 68 (29.0 bits), Expect = 1.9e-19, Sum P(2) = 1.9e-19
Identities = 16/52 (30%), Positives = 31/52 (59%)
Query: 118 VLPPTVLTRVSEYIPEIVASYIEKIIANGLAY-ESNGSVYFNVNAFDSQPNH 168
+L + YIP+++ + I+++I G+AY + SVYF+++ F PN+
Sbjct: 105 ILKADAYPHATHYIPQMIEA-IQQLINQGVAYIGQDQSVYFSISQF---PNY 152
Score = 42 (19.8 bits), Expect = 1.7e-22, Sum P(3) = 1.7e-22
Identities = 7/27 (25%), Positives = 14/27 (51%)
Query: 635 FHKDMADLNVLPPTVLTRVSEYIPEIV 661
F D+ L++L + YIP+++
Sbjct: 96 FFADLETLHILKADAYPHATHYIPQMI 122
>TIGR_CMR|APH_0555 [details] [associations]
symbol:APH_0555 "cysteinyl-tRNA synthetase" species:212042
"Anaplasma phagocytophilum HZ" [GO:0004817 "cysteine-tRNA ligase
activity" evidence=ISS] [GO:0006423 "cysteinyl-tRNA aminoacylation"
evidence=ISS] HAMAP:MF_00041 InterPro:IPR009080 InterPro:IPR015273
InterPro:IPR015803 Pfam:PF09190 PROSITE:PS00178 SMART:SM00840
Pfam:PF01406 GO:GO:0005524 GO:GO:0005737 GO:GO:0046872
EMBL:CP000235 GenomeReviews:CP000235_GR Gene3D:3.40.50.620
InterPro:IPR014729 SUPFAM:SSF47323 eggNOG:COG0215
InterPro:IPR024909 PANTHER:PTHR10890 PRINTS:PR00983 GO:GO:0004817
GO:GO:0006423 KO:K01883 TIGRFAMs:TIGR00435 HOGENOM:HOG000245250
RefSeq:YP_505147.1 ProteinModelPortal:Q2GKF4 STRING:Q2GKF4
GeneID:3930041 KEGG:aph:APH_0555 PATRIC:20949776 OMA:DFDALNM
ProtClustDB:PRK00260 BioCyc:APHA212042:GHPM-579-MONOMER
Uniprot:Q2GKF4
Length = 462
Score = 234 (87.4 bits), Expect = 3.1e-22, Sum P(3) = 3.1e-22
Identities = 44/74 (59%), Positives = 48/74 (64%)
Query: 786 SEKRSPNDFALWKKS-----KAGEPWWSSPWGEGRPGWHIECSVMASAVLGPQLDIHTGG 840
+EK P DF LWK + K G W SPWG GRPGWHIECS M+ LG DIH GG
Sbjct: 171 AEKLHPGDFVLWKPATEQDIKLGAAW-ESPWGGGRPGWHIECSAMSYRYLGESFDIHGGG 229
Query: 841 VDLKFPHHDNELAQ 854
DL FPHH+NELAQ
Sbjct: 230 ADLMFPHHENELAQ 243
Score = 87 (35.7 bits), Expect = 3.1e-22, Sum P(3) = 3.1e-22
Identities = 17/40 (42%), Positives = 26/40 (65%)
Query: 434 KSYITFDILRRILSEYFNYNITYAMNITDIDDKIIKRARQ 473
+S + +D+L R+L E + + Y NITD+DDKII A +
Sbjct: 41 RSAVVYDVLFRLLRELYP-EVIYVRNITDVDDKIINAAAE 79
Score = 69 (29.3 bits), Expect = 6.0e-19, Sum P(2) = 6.0e-19
Identities = 15/43 (34%), Positives = 26/43 (60%)
Query: 119 LPPTVLTRVSEYIPEIVASYIEKIIANGLAYESNGSVYFNVNA 161
L PTV R + I + + I +++ +G AY GSVYF++++
Sbjct: 105 LSPTVEPRATAEI-DTMLQLISRLVESGHAYVKGGSVYFSISS 146
Score = 53 (23.7 bits), Expect = 3.1e-22, Sum P(3) = 3.1e-22
Identities = 12/23 (52%), Positives = 14/23 (60%)
Query: 635 FHKDMADLNVLPPTVLTRVSEYI 657
FH+DM LN L PTV R + I
Sbjct: 95 FHEDMDALNCLSPTVEPRATAEI 117
Score = 37 (18.1 bits), Expect = 1.4e-20, Sum P(3) = 1.4e-20
Identities = 9/26 (34%), Positives = 14/26 (53%)
Query: 588 FHKDMADLNKLLTAVRDPLSDWLDSL 613
FH+DM LN L V + +D++
Sbjct: 95 FHEDMDALNCLSPTVEPRATAEIDTM 120
>UNIPROTKB|Q8A2F4 [details] [associations]
symbol:cysS "Cysteine--tRNA ligase" species:226186
"Bacteroides thetaiotaomicron VPI-5482" [GO:0004817 "cysteine-tRNA
ligase activity" evidence=ISS] [GO:0005829 "cytosol" evidence=ISS]
[GO:0006423 "cysteinyl-tRNA aminoacylation" evidence=ISS]
HAMAP:MF_00041 InterPro:IPR009080 InterPro:IPR015273
InterPro:IPR015803 Pfam:PF09190 PROSITE:PS00178 SMART:SM00840
Pfam:PF01406 GO:GO:0005829 GO:GO:0005524 GO:GO:0046872
Gene3D:3.40.50.620 InterPro:IPR014729 EMBL:AE015928
GenomeReviews:AE015928_GR SUPFAM:SSF47323 eggNOG:COG0215
InterPro:IPR024909 PANTHER:PTHR10890 PRINTS:PR00983 GO:GO:0004817
GO:GO:0006423 KO:K01883 TIGRFAMs:TIGR00435 HOGENOM:HOG000245250
ProtClustDB:PRK00260 RefSeq:NP_812263.1 ProteinModelPortal:Q8A2F4
GeneID:1075333 KEGG:bth:BT_3351 PATRIC:21061715 OMA:TITARYI
BioCyc:BTHE226186:GJXV-3416-MONOMER Uniprot:Q8A2F4
Length = 493
Score = 231 (86.4 bits), Expect = 7.0e-22, Sum P(2) = 7.0e-22
Identities = 43/78 (55%), Positives = 52/78 (66%)
Query: 779 DLSSQEASEKRSPNDFALWKKSKAGEPW-WSSPWGEGRPGWHIECSVMASAVLGPQLDIH 837
DL Q SEKR+P DFALWKK++ W SPW +G PGWH EC+ M LG DIH
Sbjct: 184 DLDGQ--SEKRNPADFALWKKAQPEHIMRWPSPWSDGFPGWHAECTAMGRKYLGEHFDIH 241
Query: 838 TGGVDLKFPHHDNELAQA 855
GG+DL FPHH+ E+AQ+
Sbjct: 242 GGGMDLIFPHHECEIAQS 259
Score = 102 (41.0 bits), Expect = 7.0e-22, Sum P(2) = 7.0e-22
Identities = 26/78 (33%), Positives = 45/78 (57%)
Query: 98 IPPSEMFKMETDKYSQFDET--VLPPTVLTRVSEYIPEIVASYIEKIIANGLAYESNGSV 155
+ P E+ + ++Y + E VL P++ S +I E + ++KI+ G AYES GSV
Sbjct: 96 LEPMEVVQYYLNRYHKAMEALNVLSPSIEPHASGHIIEQI-QLVQKILDAGYAYESEGSV 154
Query: 156 YFNVNAFDSQPNHYYAKL 173
YF+V ++ +++Y KL
Sbjct: 155 YFDVAKYNK--DYHYGKL 170
Score = 71 (30.1 bits), Expect = 1.1e-19, Sum P(3) = 1.1e-19
Identities = 19/46 (41%), Positives = 26/46 (56%)
Query: 437 ITFDILRRILSEYFNYNITYAMNITDI----------DDKIIKRAR 472
ITFD+L R L+ + Y + Y NITD+ +DKI K+AR
Sbjct: 48 ITFDVLFRYLT-HLGYKVRYVRNITDVGHLEHDADEGEDKIAKKAR 92
Score = 50 (22.7 bits), Expect = 1.1e-19, Sum P(3) = 1.1e-19
Identities = 11/25 (44%), Positives = 15/25 (60%)
Query: 635 FHKDMADLNVLPPTVLTRVSEYIPE 659
+HK M LNVL P++ S +I E
Sbjct: 109 YHKAMEALNVLSPSIEPHASGHIIE 133
>UNIPROTKB|Q9RTT6 [details] [associations]
symbol:cysS "Cysteine--tRNA ligase" species:243230
"Deinococcus radiodurans R1" [GO:0004817 "cysteine-tRNA ligase
activity" evidence=ISS] [GO:0005829 "cytosol" evidence=ISS]
[GO:0006423 "cysteinyl-tRNA aminoacylation" evidence=ISS]
HAMAP:MF_00041 InterPro:IPR009080 InterPro:IPR015273
InterPro:IPR015803 Pfam:PF09190 PROSITE:PS00178 SMART:SM00840
Pfam:PF01406 GO:GO:0005829 GO:GO:0005524 GO:GO:0046872
Gene3D:3.40.50.620 InterPro:IPR014729 SUPFAM:SSF47323 EMBL:AE000513
GenomeReviews:AE000513_GR eggNOG:COG0215 InterPro:IPR024909
PANTHER:PTHR10890 PRINTS:PR00983 GO:GO:0004817 GO:GO:0006423
KO:K01883 TIGRFAMs:TIGR00435 HOGENOM:HOG000245250
ProtClustDB:PRK00260 PIR:A75368 RefSeq:NP_295393.1
ProteinModelPortal:Q9RTT6 GeneID:1798755 KEGG:dra:DR_1670
PATRIC:21630968 OMA:HTRAGER BioCyc:DRAD243230:GH46-2039-MONOMER
Uniprot:Q9RTT6
Length = 498
Score = 243 (90.6 bits), Expect = 9.2e-22, Sum P(2) = 9.2e-22
Identities = 44/76 (57%), Positives = 51/76 (67%)
Query: 787 EKRSPNDFALWKKSKAGEPW-WSSPWGEGRPGWHIECSVMASAVLGPQLDIHTGGVDLKF 845
EKR P DFALWKK++ W SPW G PGWHIECS M+ LG DIH GG+DL+F
Sbjct: 199 EKRDPRDFALWKKAEPEHLMRWDSPWSVGFPGWHIECSAMSLKYLGEGFDIHGGGLDLQF 258
Query: 846 PHHDNELAQAEGLPTH 861
PHH+ E+AQAE H
Sbjct: 259 PHHEAEIAQAEAAGHH 274
Score = 88 (36.0 bits), Expect = 9.2e-22, Sum P(2) = 9.2e-22
Identities = 25/80 (31%), Positives = 42/80 (52%)
Query: 118 VLPPTVLTRVSEYIPEIVASYIEKIIANGLAYESNGSVYFNVNAFDSQPNHYYAKLVPEA 177
VL P++ R + +I E + IE++I G AYES GSVYF+V ++ KL +
Sbjct: 131 VLRPSINPRATGHIQEQI-KLIEELIEKGHAYESAGSVYFDVRSWPEYGKLSGRKLDDQE 189
Query: 178 YGDTKTLQEG--EVRGYPPW 195
G + +++ + R + W
Sbjct: 190 EGTREAVRDEKRDPRDFALW 209
Score = 75 (31.5 bits), Expect = 1.5e-21, Sum P(3) = 1.5e-21
Identities = 13/30 (43%), Positives = 20/30 (66%)
Query: 434 KSYITFDILRRILSEYFNYNITYAMNITDI 463
K + FD++RR L+ +F Y + Y NITD+
Sbjct: 58 KKEVAFDVIRRALT-HFGYQVRYVSNITDV 86
Score = 51 (23.0 bits), Expect = 1.5e-21, Sum P(3) = 1.5e-21
Identities = 11/25 (44%), Positives = 16/25 (64%)
Query: 635 FHKDMADLNVLPPTVLTRVSEYIPE 659
F +DM LNVL P++ R + +I E
Sbjct: 122 FFRDMDALNVLRPSINPRATGHIQE 146
>UNIPROTKB|Q89NP8 [details] [associations]
symbol:cysS "Cysteine--tRNA ligase" species:224911
"Bradyrhizobium japonicum USDA 110" [GO:0004817 "cysteine-tRNA
ligase activity" evidence=ISS] [GO:0005829 "cytosol" evidence=ISS]
[GO:0006423 "cysteinyl-tRNA aminoacylation" evidence=ISS]
HAMAP:MF_00041 InterPro:IPR009080 InterPro:IPR015273
InterPro:IPR015803 PROSITE:PS00178 SMART:SM00840 Pfam:PF01406
GO:GO:0005829 GO:GO:0005524 GO:GO:0046872 Gene3D:3.40.50.620
InterPro:IPR014729 SUPFAM:SSF47323 EMBL:BA000040
GenomeReviews:BA000040_GR eggNOG:COG0215 InterPro:IPR024909
PANTHER:PTHR10890 PRINTS:PR00983 GO:GO:0004817 GO:GO:0006423
KO:K01883 TIGRFAMs:TIGR00435 HOGENOM:HOG000245250 OMA:DFDALNM
ProtClustDB:PRK00260 RefSeq:NP_770430.1 ProteinModelPortal:Q89NP8
GeneID:1053062 KEGG:bja:blr3790 PATRIC:21191047
BioCyc:BJAP224911:GJEJ-3814-MONOMER Uniprot:Q89NP8
Length = 460
Score = 240 (89.5 bits), Expect = 9.7e-22, Sum P(2) = 9.7e-22
Identities = 45/73 (61%), Positives = 50/73 (68%)
Query: 785 ASEKRSPNDFALWKKSKAGEPWWSSPWG---EGRPGWHIECSVMASAVLGPQLDIHTGGV 841
A K+ DF LWK SK GEP W SP G +GRPGWHIECS MA LG DIH GG+
Sbjct: 187 APYKKGSTDFVLWKPSKPGEPSWPSPAGIAAQGRPGWHIECSAMAWKHLGEYFDIHGGGI 246
Query: 842 DLKFPHHDNELAQ 854
DL FPHH+NE+AQ
Sbjct: 247 DLVFPHHENEVAQ 259
Score = 89 (36.4 bits), Expect = 9.7e-22, Sum P(2) = 9.7e-22
Identities = 24/75 (32%), Positives = 39/75 (52%)
Query: 437 ITFDILRRILSE-YFNYNITYAMNITDIDDKIIKRARQNYL---FEKHVQENEIQTSKIL 492
I FD+L R+L Y ++ Y NITD+DDKI RA +++ + ++E QT K
Sbjct: 46 IVFDVLFRLLRHLYGEAHVKYVRNITDVDDKINDRAARDFPGLPLNEAIREVTEQTGKQF 105
Query: 493 KDIGEVMGAFESKMK 507
+ +GA ++
Sbjct: 106 HADVDALGALRPSVE 120
Score = 69 (29.3 bits), Expect = 1.2e-19, Sum P(2) = 1.2e-19
Identities = 22/73 (30%), Positives = 38/73 (52%)
Query: 98 IPPSEMFKMETDKYS-QFDETV-----LPPTVLTRVSEYIPEIVASYIEKIIANGLAYES 151
+P +E + T++ QF V L P+V R +E+I E+ IE+++A G AY +
Sbjct: 88 LPLNEAIREVTEQTGKQFHADVDALGALRPSVEPRATEHIGEM-REIIERLVAGGFAYVA 146
Query: 152 NGSVYFNVNAFDS 164
V F+ A ++
Sbjct: 147 EDHVLFSPQAMNA 159
Score = 53 (23.7 bits), Expect = 5.5e-18, Sum P(2) = 5.5e-18
Identities = 11/27 (40%), Positives = 17/27 (62%)
Query: 634 EFHKDMADLNVLPPTVLTRVSEYIPEI 660
+FH D+ L L P+V R +E+I E+
Sbjct: 104 QFHADVDALGALRPSVEPRATEHIGEM 130
>UNIPROTKB|Q8TSP6 [details] [associations]
symbol:cysS "Cysteine--tRNA ligase" species:188937
"Methanosarcina acetivorans C2A" [GO:0004817 "cysteine-tRNA ligase
activity" evidence=ISS] [GO:0005829 "cytosol" evidence=ISS]
[GO:0006423 "cysteinyl-tRNA aminoacylation" evidence=ISS]
HAMAP:MF_00041 InterPro:IPR009080 InterPro:IPR015273
InterPro:IPR015803 Pfam:PF09190 PROSITE:PS00178 SMART:SM00840
Pfam:PF01406 GO:GO:0005829 GO:GO:0005524 GO:GO:0046872
Gene3D:3.40.50.620 InterPro:IPR014729 SUPFAM:SSF47323 EMBL:AE010299
GenomeReviews:AE010299_GR eggNOG:COG0215 InterPro:IPR024909
PANTHER:PTHR10890 PRINTS:PR00983 GO:GO:0004817 GO:GO:0006423
KO:K01883 TIGRFAMs:TIGR00435 OMA:DFDALNM ProtClustDB:PRK00260
RefSeq:NP_615709.1 ProteinModelPortal:Q8TSP6 GeneID:1472641
KEGG:mac:MA0749 BioCyc:MACE188937:GI2O-817-MONOMER Uniprot:Q8TSP6
Length = 473
Score = 245 (91.3 bits), Expect = 3.4e-21, Sum P(2) = 3.4e-21
Identities = 47/75 (62%), Positives = 55/75 (73%)
Query: 787 EKRSPNDFALWKKSKAGEP----WWSSPWGEGRPGWHIECSVMASAVLGPQLDIHTGGVD 842
+K +P DFAL K S E ++ SPWG+ RPGWHIECSVMA GP LDIHTGGVD
Sbjct: 174 DKDNPRDFALLKASTPEEIERGIYYDSPWGKIRPGWHIECSVMAMNSFGPTLDIHTGGVD 233
Query: 843 LKFPHHDNELAQAEG 857
L FPHH+NE+AQ+EG
Sbjct: 234 LIFPHHENEIAQSEG 248
Score = 79 (32.9 bits), Expect = 3.4e-21, Sum P(2) = 3.4e-21
Identities = 16/36 (44%), Positives = 24/36 (66%)
Query: 437 ITFDILRRILSEYFNYNITYAMNITDIDDKIIKRAR 472
+T ++LR + EY Y + MNITDIDDK I+ ++
Sbjct: 46 MTDNVLRAL--EYLGYRVKLVMNITDIDDKTIRDSK 79
Score = 74 (31.1 bits), Expect = 1.1e-20, Sum P(2) = 1.1e-20
Identities = 23/60 (38%), Positives = 30/60 (50%)
Query: 108 TDKYSQFDETVLPPTVLTRVSEY--IPEIVASYIE---KIIANGLAYESNGSVYFNVNAF 162
TDKY+ L + R Y E V IE K+I GLAYE +GSVY+ ++ F
Sbjct: 89 TDKYTAEFFKGLDMLNIKRAFAYPRATENVDGMIELARKLIEKGLAYEKDGSVYYRISGF 148
>UNIPROTKB|Q8F525 [details] [associations]
symbol:cysS "Cysteine--tRNA ligase" species:189518
"Leptospira interrogans serovar Lai str. 56601" [GO:0004817
"cysteine-tRNA ligase activity" evidence=ISS] [GO:0005829 "cytosol"
evidence=ISS] [GO:0006423 "cysteinyl-tRNA aminoacylation"
evidence=ISS] HAMAP:MF_00041 InterPro:IPR009080 InterPro:IPR015273
InterPro:IPR015803 Pfam:PF09190 PROSITE:PS00178 SMART:SM00840
Pfam:PF01406 GO:GO:0005829 GO:GO:0005524 GO:GO:0046872
Gene3D:3.40.50.620 InterPro:IPR014729 SUPFAM:SSF47323
eggNOG:COG0215 InterPro:IPR024909 PANTHER:PTHR10890 PRINTS:PR00983
GO:GO:0004817 GO:GO:0006423 EMBL:AE010300 GenomeReviews:AE010300_GR
KO:K01883 TIGRFAMs:TIGR00435 HOGENOM:HOG000245250
ProtClustDB:PRK00260 OMA:NHICNIC RefSeq:NP_712044.1
ProteinModelPortal:Q8F525 PaxDb:Q8F525 GeneID:1151206
KEGG:lil:LA_1863 PATRIC:22384560
BioCyc:LINT189518:GJBB-1494-MONOMER Uniprot:Q8F525
Length = 471
Score = 236 (88.1 bits), Expect = 4.2e-21, Sum P(2) = 4.2e-21
Identities = 43/72 (59%), Positives = 49/72 (68%)
Query: 787 EKRSPNDFALWKKSKA-GEPWWSSPWGEGRPGWHIECSVMASAVLGPQLDIHTGGVDLKF 845
EK DF LWK K GE W + G GRPGWH+ECS M V G +DIHTGGVDL F
Sbjct: 176 EKEDVRDFVLWKSPKLEGETSWDTLVGTGRPGWHLECSAMIRKVYGSGVDIHTGGVDLLF 235
Query: 846 PHHDNELAQAEG 857
PHH+NE+AQ+EG
Sbjct: 236 PHHENEIAQSEG 247
Score = 88 (36.0 bits), Expect = 4.2e-21, Sum P(2) = 4.2e-21
Identities = 28/95 (29%), Positives = 46/95 (48%)
Query: 434 KSYITFDILRRILSEYFNYNITYAMNITDIDDKIIKRARQNYLFEKHVQENEIQTSK-IL 492
++++ D+LRR L + Y + MNITDIDDKII R + +K + E +K
Sbjct: 44 RAFLFVDVLRRSL-KLLGYGVDMTMNITDIDDKII---RDSIASKKSIIEFTAPWTKAFF 99
Query: 493 KDIGEVMGAFESKMKLVTDPDKLTMMKNILSNVQE 527
+D+ V TD + M +I+ +Q+
Sbjct: 100 EDLKTVSAEILEHYPKATD--SIPEMVDIIQKLQK 132
>TIGR_CMR|ECH_0768 [details] [associations]
symbol:ECH_0768 "cysteinyl-tRNA synthetase" species:205920
"Ehrlichia chaffeensis str. Arkansas" [GO:0004817 "cysteine-tRNA
ligase activity" evidence=ISS] [GO:0006423 "cysteinyl-tRNA
aminoacylation" evidence=ISS] HAMAP:MF_00041 InterPro:IPR009080
InterPro:IPR015273 InterPro:IPR015803 Pfam:PF09190 PROSITE:PS00178
SMART:SM00840 Pfam:PF01406 GO:GO:0005524 GO:GO:0005737
GO:GO:0046872 EMBL:CP000236 GenomeReviews:CP000236_GR
Gene3D:3.40.50.620 InterPro:IPR014729 SUPFAM:SSF47323
eggNOG:COG0215 InterPro:IPR024909 PANTHER:PTHR10890 PRINTS:PR00983
GO:GO:0004817 GO:GO:0006423 KO:K01883 TIGRFAMs:TIGR00435
HOGENOM:HOG000245250 ProtClustDB:PRK00260 RefSeq:YP_507566.1
ProteinModelPortal:Q2GG67 STRING:Q2GG67 GeneID:3927265
KEGG:ech:ECH_0768 PATRIC:20576968 OMA:NHICNIC
BioCyc:ECHA205920:GJNR-771-MONOMER Uniprot:Q2GG67
Length = 459
Score = 224 (83.9 bits), Expect = 3.3e-20, Sum P(2) = 3.3e-20
Identities = 40/72 (55%), Positives = 48/72 (66%)
Query: 788 KRSPNDFALWKKSKAGE----PWWSSPWGEGRPGWHIECSVMASAVLGPQLDIHTGGVDL 843
K+ P DF LWK + + WSSPWG GRPGWHIECS M+ L DIH GG DL
Sbjct: 173 KKHPGDFVLWKPATEIDNQLMSCWSSPWGLGRPGWHIECSAMSYRYLKENFDIHGGGADL 232
Query: 844 KFPHHDNELAQA 855
+FPHH+NE+AQ+
Sbjct: 233 QFPHHENEIAQS 244
Score = 92 (37.4 bits), Expect = 3.3e-20, Sum P(2) = 3.3e-20
Identities = 18/46 (39%), Positives = 31/46 (67%)
Query: 119 LPPTVLTRVSEYIPEIVASYIEKIIANGLAYESNGSVYFNVNAFDS 164
L PT R ++ I +++ S I+K++ +G AY NGSV+FN+ ++ S
Sbjct: 105 LEPTYEPRATDNI-DVIISLIQKLVDSGHAYVYNGSVFFNIESYSS 149
Score = 86 (35.3 bits), Expect = 1.4e-19, Sum P(2) = 1.4e-19
Identities = 20/41 (48%), Positives = 27/41 (65%)
Query: 434 KSYITFDILRRILSEYFNYNITYAMNITDIDDKIIKRARQN 474
+S + +D+L R+L + +TY NITDIDDKII A QN
Sbjct: 41 RSVVIYDVLFRLLKLLYP-KVTYVRNITDIDDKIINVA-QN 79
Score = 70 (29.7 bits), Expect = 6.4e-18, Sum P(2) = 6.4e-18
Identities = 34/120 (28%), Positives = 60/120 (50%)
Query: 552 LTAVRDPFSDW-LDSLH----GSSITDNSIFATLPKHWEAEFHKDMADLNKLL----TAV 602
LT +++PF + +D++ G ++ D FA + + + L KLL T V
Sbjct: 7 LTGIKEPFVPFSIDNVRVYVCGPTVYD---FAHIGNARSVVIYDVLFRLLKLLYPKVTYV 63
Query: 603 RDPLSDWLDSL-HGSSITDNSIFATLPKHWEAEFHKDMADLNVLPPTVLTRVSEYIPEIV 661
R+ ++D D + + + T+ SI+ + +A FH+DM LN L PT R ++ I I+
Sbjct: 64 RN-ITDIDDKIINVAQNTNQSIYDVTAIYIKA-FHEDMRMLNCLEPTYEPRATDNIDVII 121
>TAIR|locus:2078406 [details] [associations]
symbol:AT3G56300 "AT3G56300" species:3702 "Arabidopsis
thaliana" [GO:0004817 "cysteine-tRNA ligase activity"
evidence=IEA;ISS;IBA] [GO:0005524 "ATP binding" evidence=IEA;ISS]
[GO:0005737 "cytoplasm" evidence=ISM] [GO:0005739 "mitochondrion"
evidence=IBA] [GO:0005829 "cytosol" evidence=IBA] [GO:0006423
"cysteinyl-tRNA aminoacylation" evidence=IEA;ISS;IBA] [GO:0009507
"chloroplast" evidence=IBA] HAMAP:MF_00041 InterPro:IPR009080
InterPro:IPR015803 Pfam:PF01406 GO:GO:0005829 GO:GO:0005739
GO:GO:0005524 GO:GO:0009507 EMBL:CP002686 GenomeReviews:BA000014_GR
Gene3D:3.40.50.620 InterPro:IPR014729 EMBL:AL163763 SUPFAM:SSF47323
eggNOG:COG0215 InterPro:IPR024909 PANTHER:PTHR10890 PRINTS:PR00983
GO:GO:0004817 GO:GO:0006423 HSSP:P21888 KO:K01883
TIGRFAMs:TIGR00435 HOGENOM:HOG000245250 IPI:IPI00546523 PIR:T47747
RefSeq:NP_191189.1 UniGene:At.34947 ProteinModelPortal:Q9LYL3
SMR:Q9LYL3 STRING:Q9LYL3 PRIDE:Q9LYL3 EnsemblPlants:AT3G56300.1
GeneID:824797 KEGG:ath:AT3G56300 TAIR:At3g56300 InParanoid:Q9LYL3
OMA:GGEDHIA PhylomeDB:Q9LYL3 ProtClustDB:CLSN2913449
Genevestigator:Q9LYL3 Uniprot:Q9LYL3
Length = 489
Score = 219 (82.2 bits), Expect = 1.9e-19, Sum P(3) = 1.9e-19
Identities = 42/69 (60%), Positives = 47/69 (68%)
Query: 786 SEKRSPNDFALWKKSKAGEPWWSSPWGEGRPGWHIECSVMASAVLGPQLDIHTGGVDLKF 845
S KR+P DFAL K +K+GEP W SPWG GRPGWHIE DIH GG DLKF
Sbjct: 177 SRKRNPADFALRKAAKSGEPSWESPWGHGRPGWHIE------------FDIHGGGADLKF 224
Query: 846 PHHDNELAQ 854
PHH+NE+AQ
Sbjct: 225 PHHENEIAQ 233
Score = 86 (35.3 bits), Expect = 7.2e-19, Sum P(2) = 7.2e-19
Identities = 21/50 (42%), Positives = 30/50 (60%)
Query: 119 LPPTVLTRVSEYIPEIVASYIEKIIANGLAYESNGSVYFNVNAFDSQPNH 168
L PT RVS+++ +I+ IEKII NG Y G V+F+V D P++
Sbjct: 111 LLPTHQPRVSDHMEQII-KMIEKIIENGCGYAVGGDVFFSV---DKSPSY 156
Score = 80 (33.2 bits), Expect = 1.9e-19, Sum P(3) = 1.9e-19
Identities = 14/33 (42%), Positives = 22/33 (66%)
Query: 434 KSYITFDILRRILSEYFNYNITYAMNITDIDDK 466
++ ++FD+L R L + Y +TY N TD+DDK
Sbjct: 51 RAAVSFDLLYRYL-RHLGYQVTYVRNFTDVDDK 82
Score = 52 (23.4 bits), Expect = 1.9e-19, Sum P(3) = 1.9e-19
Identities = 12/28 (42%), Positives = 18/28 (64%)
Query: 634 EFHKDMADLNVLPPTVLTRVSEYIPEIV 661
E+ DMA L L PT RVS+++ +I+
Sbjct: 100 EYLLDMAALQCLLPTHQPRVSDHMEQII 127
>TIGR_CMR|CJE_0893 [details] [associations]
symbol:CJE_0893 "cysteinyl-tRNA synthetase" species:195099
"Campylobacter jejuni RM1221" [GO:0004817 "cysteine-tRNA ligase
activity" evidence=ISS] [GO:0006423 "cysteinyl-tRNA aminoacylation"
evidence=ISS] HAMAP:MF_00041 InterPro:IPR009080 InterPro:IPR015273
InterPro:IPR015803 Pfam:PF09190 PROSITE:PS00178 SMART:SM00840
Pfam:PF01406 GO:GO:0005524 GO:GO:0005737 GO:GO:0046872
EMBL:CP000025 GenomeReviews:CP000025_GR Gene3D:3.40.50.620
InterPro:IPR014729 SUPFAM:SSF47323 eggNOG:COG0215
InterPro:IPR024909 PANTHER:PTHR10890 PRINTS:PR00983 GO:GO:0004817
GO:GO:0006423 KO:K01883 TIGRFAMs:TIGR00435 HOGENOM:HOG000245250
OMA:DFDALNM ProtClustDB:PRK00260 RefSeq:YP_178895.1
ProteinModelPortal:Q5HUZ0 STRING:Q5HUZ0 GeneID:3231406
KEGG:cjr:CJE0893 PATRIC:20043553 BioCyc:CJEJ195099:GJC0-913-MONOMER
Uniprot:Q5HUZ0
Length = 462
Score = 195 (73.7 bits), Expect = 8.6e-18, Sum P(3) = 8.6e-18
Identities = 34/68 (50%), Positives = 46/68 (67%)
Query: 787 EKRSPNDFALWKKSKAGEPWWSSPWGEGRPGWHIECSVMASAVLGPQLDIHTGGVDLKFP 846
+KR+ +DF LWK E ++ + +G+GRPGWH EC M ++ LDIH GG+DL FP
Sbjct: 167 QKRNESDFVLWKFD---ENFYENEFGKGRPGWHTECVAMIDSIFENTLDIHAGGIDLLFP 223
Query: 847 HHDNELAQ 854
HH+NE AQ
Sbjct: 224 HHENEAAQ 231
Score = 93 (37.8 bits), Expect = 8.6e-18, Sum P(3) = 8.6e-18
Identities = 19/41 (46%), Positives = 28/41 (68%)
Query: 434 KSYITFDILRRILSEYFNYNITYAMNITDIDDKIIKRARQN 474
+S + FD+LRR+L N + +A N TDIDDKI+K+ Q+
Sbjct: 38 RSSVCFDLLRRVLLAQGN-RVKFARNYTDIDDKILKKMTQS 77
Score = 54 (24.1 bits), Expect = 5.7e-13, Sum P(2) = 5.7e-13
Identities = 12/43 (27%), Positives = 21/43 (48%)
Query: 118 VLPPTVLTRVSEYIPEIVASYIEKIIANGLAYESNGSVYFNVN 160
VL P R + YI ++ I+K+ +G Y +YF+ +
Sbjct: 101 VLDPDFKPRATHYITAML-DLIKKLAKDGFVYTLEDGIYFDTS 142
Score = 48 (22.0 bits), Expect = 8.6e-18, Sum P(3) = 8.6e-18
Identities = 10/23 (43%), Positives = 13/23 (56%)
Query: 635 FHKDMADLNVLPPTVLTRVSEYI 657
+ +DM LNVL P R + YI
Sbjct: 92 YEEDMRALNVLDPDFKPRATHYI 114
>UNIPROTKB|P67017 [details] [associations]
symbol:mshC "L-cysteine:1D-myo-inositol
2-amino-2-deoxy-alpha-D-glucopyranoside ligase" species:1773
"Mycobacterium tuberculosis" [GO:0005829 "cytosol" evidence=TAS]
[GO:0005886 "plasma membrane" evidence=IDA] [GO:0010125 "mycothiol
biosynthetic process" evidence=TAS] [GO:0010126 "mycothiol
metabolic process" evidence=TAS] [GO:0016049 "cell growth"
evidence=IMP] [GO:0035446 "cysteine-glucosaminylinositol ligase
activity" evidence=IDA;TAS] [GO:0040007 "growth" evidence=IMP]
[GO:0004817 "cysteine-tRNA ligase activity" evidence=IDA]
HAMAP:MF_01697 InterPro:IPR009080 InterPro:IPR017812 Pfam:PF01406
GO:GO:0005829 GO:GO:0005886 GO:GO:0005524 EMBL:AE000516
GenomeReviews:AE000516_GR GenomeReviews:AL123456_GR GO:GO:0046872
GO:GO:0016049 EMBL:BX842578 GO:GO:0006418 Gene3D:3.40.50.620
InterPro:IPR014729 Reactome:REACT_27295 GO:GO:0004812
SUPFAM:SSF47323 GO:GO:0010125 PIR:E70514 RefSeq:NP_216646.1
RefSeq:NP_336658.1 RefSeq:YP_006515546.1 ProteinModelPortal:P67017
SMR:P67017 PRIDE:P67017 EnsemblBacteria:EBMYCT00000003463
EnsemblBacteria:EBMYCT00000072526 GeneID:13316937 GeneID:887492
GeneID:924281 KEGG:mtc:MT2188 KEGG:mtu:Rv2130c KEGG:mtv:RVBD_2130c
PATRIC:18126570 TubercuList:Rv2130c eggNOG:COG0215
HOGENOM:HOG000245251 KO:K15526 OMA:DVHYVQN ProtClustDB:PRK12418
BindingDB:P67017 ChEMBL:CHEMBL1744527 GO:GO:0035446
InterPro:IPR024909 PANTHER:PTHR10890 PRINTS:PR00983
TIGRFAMs:TIGR03447 Uniprot:P67017
Length = 414
Score = 198 (74.8 bits), Expect = 7.1e-17, Sum P(2) = 7.1e-17
Identities = 34/64 (53%), Positives = 44/64 (68%)
Query: 793 DFALWKKSKAGEPWWSSPWGEGRPGWHIECSVMASAVLGPQLDIHTGGVDLKFPHHDNEL 852
D LW+ ++ GEP W SP+G GRPGWH+EC+ +A + +G LDI GG DL FPHH+
Sbjct: 204 DALLWRAARPGEPSWPSPFGPGRPGWHVECAAIALSRIGSGLDIQGGGSDLIFPHHEFTA 263
Query: 853 AQAE 856
A AE
Sbjct: 264 AHAE 267
Score = 86 (35.3 bits), Expect = 7.1e-17, Sum P(2) = 7.1e-17
Identities = 16/52 (30%), Positives = 33/52 (63%)
Query: 435 SYITFDILRRILSEYFNYNITYAMNITDIDDKIIKRARQNYLFEKHVQENEI 486
+Y+TFD++ R+ + + + Y NITDIDD + +RA ++ + + + + E+
Sbjct: 58 TYVTFDLIHRLWLD-LGHELHYVQNITDIDDPLFERADRDGVDWRDLAQAEV 108
Score = 62 (26.9 bits), Expect = 2.2e-14, Sum P(2) = 2.2e-14
Identities = 24/73 (32%), Positives = 35/73 (47%)
Query: 589 HKDMADLNKLLTAVRDPLSDWLDSLHGSSITDNSIFATLPKHWEAEFHKDMADLNVLPPT 648
H+ DL L V++ ++D D L + D + L + A F +DMA L VLPP
Sbjct: 66 HRLWLDLGHELHYVQN-ITDIDDPLFERADRDGVDWRDLAQAEVALFCEDMAALRVLPPQ 124
Query: 649 VLTRVSEYIPEIV 661
+E I E+V
Sbjct: 125 DYVGATEAIAEMV 137
Score = 56 (24.8 bits), Expect = 9.3e-14, Sum P(2) = 9.3e-14
Identities = 15/32 (46%), Positives = 19/32 (59%)
Query: 118 VLPPTVLTRVSEYIPEIVASYIEKIIANGLAY 149
VLPP +E I E+V IEK++A G AY
Sbjct: 120 VLPPQDYVGATEAIAEMV-ELIEKMLACGAAY 150
>UNIPROTKB|Q9ADA4 [details] [associations]
symbol:mshC "L-cysteine:1D-myo-inositol
2-amino-2-deoxy-alpha-D-glucopyranoside ligase" species:100226
"Streptomyces coelicolor A3(2)" [GO:0004817 "cysteine-tRNA ligase
activity" evidence=ISS] [GO:0005829 "cytosol" evidence=ISS]
[GO:0006423 "cysteinyl-tRNA aminoacylation" evidence=ISS]
HAMAP:MF_01697 InterPro:IPR017812 Pfam:PF01406 GO:GO:0005829
GO:GO:0005524 GO:GO:0046872 GenomeReviews:AL645882_GR
Gene3D:3.40.50.620 InterPro:IPR014729 GO:GO:0010125 eggNOG:COG0215
HOGENOM:HOG000245251 KO:K15526 OMA:DVHYVQN ProtClustDB:PRK12418
GO:GO:0035446 InterPro:IPR024909 PANTHER:PTHR10890 PRINTS:PR00983
TIGRFAMs:TIGR03447 EMBL:AL939109 RefSeq:NP_625938.1
ProteinModelPortal:Q9ADA4 GeneID:1097094 KEGG:sco:SCO1663
PATRIC:23732932 GO:GO:0004817 GO:GO:0006423 Uniprot:Q9ADA4
Length = 409
Score = 174 (66.3 bits), Expect = 6.3e-13, Sum P(2) = 6.3e-13
Identities = 33/72 (45%), Positives = 42/72 (58%)
Query: 788 KRSPNDFALWKKSKAGEPWWSS-PWGEGRPGWHIECSVMASAVLGPQLDIHTGGVDLKFP 846
K++P D LW ++ GEP W G GRPGWHIEC +A LG D+ GG DL FP
Sbjct: 193 KKNPLDPMLWMAAREGEPSWDGGTLGRGRPGWHIECVAIALDHLGMGFDVQGGGSDLAFP 252
Query: 847 HHDNELAQAEGL 858
HH+ + A+ L
Sbjct: 253 HHEMGASHAQAL 264
Score = 74 (31.1 bits), Expect = 6.3e-13, Sum P(2) = 6.3e-13
Identities = 19/44 (43%), Positives = 24/44 (54%)
Query: 118 VLPPTVLTRVSEYIPEIVASYIEKIIANGLAYESNGSVYFNVNA 161
+LPP E IP IV +E++ G AYE G VYF+V A
Sbjct: 120 MLPPQHYIGAVEAIPGIVP-LVERLRDAGAAYELEGDVYFSVEA 162
Score = 70 (29.7 bits), Expect = 1.6e-12, Sum P(2) = 1.6e-12
Identities = 12/37 (32%), Positives = 24/37 (64%)
Query: 435 SYITFDILRRILSEYFNYNITYAMNITDIDDKIIKRA 471
+Y FD+++R+ + + Y N+TD+DD +++RA
Sbjct: 58 TYNAFDLVQRVWLDT-KRQVHYVQNVTDVDDPLLERA 93
Score = 59 (25.8 bits), Expect = 2.2e-11, Sum P(2) = 2.2e-11
Identities = 18/56 (32%), Positives = 26/56 (46%)
Query: 606 LSDWLDSLHGSSITDNSIFATLPKHWEAEFHKDMADLNVLPPTVLTRVSEYIPEIV 661
++D D L ++ D + L + A F +DM L +LPP E IP IV
Sbjct: 82 VTDVDDPLLERAVRDGVDWTALAEQETALFREDMTALRMLPPQHYIGAVEAIPGIV 137
>UNIPROTKB|Q9Y3E1 [details] [associations]
symbol:HDGFRP3 "Hepatoma-derived growth factor-related
protein 3" species:9606 "Homo sapiens" [GO:0008083 "growth factor
activity" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0008283 "cell proliferation" evidence=NAS] [GO:0005634
"nucleus" evidence=IDA] [GO:0005730 "nucleolus" evidence=IDA]
Pfam:PF00855 GO:GO:0005634 GO:GO:0005737 GO:GO:0008283
InterPro:IPR000313 PROSITE:PS50812 SMART:SM00293
HOGENOM:HOG000112874 HOVERGEN:HBG010574 EMBL:AB029156 EMBL:AF110642
EMBL:AF151900 EMBL:AK001280 EMBL:BC015483 IPI:IPI00007063
PIR:JC7163 RefSeq:NP_057157.1 UniGene:Hs.513954
ProteinModelPortal:Q9Y3E1 SMR:Q9Y3E1 IntAct:Q9Y3E1 STRING:Q9Y3E1
PhosphoSite:Q9Y3E1 DMDM:68052386 PaxDb:Q9Y3E1 PeptideAtlas:Q9Y3E1
PRIDE:Q9Y3E1 DNASU:50810 GeneID:50810 KEGG:hsa:50810
UCSC:uc002bjs.1 CTD:50810 GeneCards:GC15M083784 HPA:HPA040719
neXtProt:NX_Q9Y3E1 eggNOG:NOG273102 InParanoid:Q9Y3E1 OMA:NEKGGSK
OrthoDB:EOG40VVQS PhylomeDB:Q9Y3E1 GenomeRNAi:50810 NextBio:53254
Bgee:Q9Y3E1 Genevestigator:Q9Y3E1 GermOnline:ENSG00000166503
Uniprot:Q9Y3E1
Length = 203
Score = 154 (59.3 bits), Expect = 5.8e-10, P = 5.8e-10
Identities = 29/57 (50%), Positives = 38/57 (66%)
Query: 188 EVRGYPPWPARIEGLADET--PNRLKYHIFFYGTRETGICRQDELFPYTEFKDKYGK 242
+++GYP WPARI+ L + P KY IFF+GT ET +LFPY E+KDK+GK
Sbjct: 18 KMKGYPHWPARIDELPEGAVKPPANKYPIFFFGTHETAFLGPKDLFPYKEYKDKFGK 74
>MGI|MGI:1352760 [details] [associations]
symbol:Hdgfrp3 "hepatoma-derived growth factor, related
protein 3" species:10090 "Mus musculus" [GO:0003682 "chromatin
binding" evidence=NAS] [GO:0005634 "nucleus" evidence=ISO;ISS;IDA]
[GO:0005737 "cytoplasm" evidence=IDA] [GO:0008083 "growth factor
activity" evidence=IEA] [GO:0008283 "cell proliferation"
evidence=ISS] MGI:MGI:1352760 Pfam:PF00855 GO:GO:0005634
GO:GO:0005737 GO:GO:0008283 GO:GO:0003682 InterPro:IPR000313
PROSITE:PS50812 SMART:SM00293 HOGENOM:HOG000112874
HOVERGEN:HBG010574 GeneTree:ENSGT00530000063013 CTD:50810
eggNOG:NOG273102 OMA:NEKGGSK OrthoDB:EOG40VVQS EMBL:AB029493
EMBL:AK019487 EMBL:AK044858 EMBL:AK045542 EMBL:AK051401
EMBL:AK162418 EMBL:BC055734 IPI:IPI00224067 IPI:IPI00608040
RefSeq:NP_038914.2 UniGene:Mm.392934 PDB:1N27 PDBsum:1N27
ProteinModelPortal:Q9JMG7 SMR:Q9JMG7 PhosphoSite:Q9JMG7
PaxDb:Q9JMG7 PRIDE:Q9JMG7 Ensembl:ENSMUST00000026094
Ensembl:ENSMUST00000107305 GeneID:29877 KEGG:mmu:29877
UCSC:uc009icr.1 UCSC:uc009ics.1 InParanoid:Q9JMG7
EvolutionaryTrace:Q9JMG7 NextBio:307118 Bgee:Q9JMG7
CleanEx:MM_HDGFRP3 Genevestigator:Q9JMG7 Uniprot:Q9JMG7
Length = 202
Score = 154 (59.3 bits), Expect = 5.8e-10, P = 5.8e-10
Identities = 29/57 (50%), Positives = 38/57 (66%)
Query: 188 EVRGYPPWPARIEGLADET--PNRLKYHIFFYGTRETGICRQDELFPYTEFKDKYGK 242
+++GYP WPARI+ L + P KY IFF+GT ET +LFPY E+KDK+GK
Sbjct: 18 KMKGYPHWPARIDELPEGAVKPPANKYPIFFFGTHETAFLGPKDLFPYKEYKDKFGK 74
>RGD|628773 [details] [associations]
symbol:Hdgfrp3 "hepatoma-derived growth factor, related protein
3" species:10116 "Rattus norvegicus" [GO:0005634 "nucleus"
evidence=ISO;ISS] [GO:0005737 "cytoplasm" evidence=IEA;ISO]
[GO:0008083 "growth factor activity" evidence=IEA] [GO:0005730
"nucleolus" evidence=ISO] Pfam:PF00855 RGD:628773 GO:GO:0005634
GO:GO:0005737 InterPro:IPR000313 PROSITE:PS50812 SMART:SM00293
HOGENOM:HOG000112874 HOVERGEN:HBG010574 CTD:50810 eggNOG:NOG273102
OrthoDB:EOG40VVQS EMBL:AF389347 IPI:IPI00204130 RefSeq:NP_665728.1
UniGene:Rn.17383 ProteinModelPortal:Q923W4 SMR:Q923W4 STRING:Q923W4
PhosphoSite:Q923W4 GeneID:252941 KEGG:rno:252941 UCSC:RGD:628773
InParanoid:Q923W4 NextBio:624115 ArrayExpress:Q923W4
Genevestigator:Q923W4 Uniprot:Q923W4
Length = 202
Score = 154 (59.3 bits), Expect = 5.8e-10, P = 5.8e-10
Identities = 29/57 (50%), Positives = 38/57 (66%)
Query: 188 EVRGYPPWPARIEGLADET--PNRLKYHIFFYGTRETGICRQDELFPYTEFKDKYGK 242
+++GYP WPARI+ L + P KY IFF+GT ET +LFPY E+KDK+GK
Sbjct: 18 KMKGYPHWPARIDELPEGAVKPPANKYPIFFFGTHETAFLGPKDLFPYKEYKDKFGK 74
>UNIPROTKB|E1BHR3 [details] [associations]
symbol:HDGFRP3 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] Pfam:PF00855 GO:GO:0005634 GO:GO:0005737
InterPro:IPR000313 PROSITE:PS50812 GeneTree:ENSGT00530000063013
OMA:NEKGGSK EMBL:DAAA02052272 IPI:IPI00971492
Ensembl:ENSBTAT00000024660 Uniprot:E1BHR3
Length = 185
Score = 153 (58.9 bits), Expect = 7.4e-10, P = 7.4e-10
Identities = 29/56 (51%), Positives = 37/56 (66%)
Query: 189 VRGYPPWPARIEGLADET--PNRLKYHIFFYGTRETGICRQDELFPYTEFKDKYGK 242
++GYP WPARI+ L + P KY IFF+GT ET +LFPY E+KDK+GK
Sbjct: 1 MKGYPHWPARIDELPEGAVKPPANKYPIFFFGTHETAFLGPKDLFPYKEYKDKFGK 56
>ZFIN|ZDB-GENE-050213-2 [details] [associations]
symbol:hdgfrp3 "hepatoma-derived growth factor,
related protein 3" species:7955 "Danio rerio" [GO:0003674
"molecular_function" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] [GO:0008150 "biological_process" evidence=ND]
Pfam:PF00855 ZFIN:ZDB-GENE-050213-2 InterPro:IPR000313
PROSITE:PS50812 SMART:SM00293 HOVERGEN:HBG010574 CTD:50810
eggNOG:NOG273102 EMBL:BC090065 IPI:IPI00554355
RefSeq:NP_001012372.1 UniGene:Dr.78250 ProteinModelPortal:Q5FVD1
SMR:Q5FVD1 PRIDE:Q5FVD1 GeneID:497284 KEGG:dre:497284
NextBio:20865921 Uniprot:Q5FVD1
Length = 201
Score = 145 (56.1 bits), Expect = 2.1e-08, P = 2.1e-08
Identities = 27/57 (47%), Positives = 37/57 (64%)
Query: 188 EVRGYPPWPARIEGLADET--PNRLKYHIFFYGTRETGICRQDELFPYTEFKDKYGK 242
+++GYP WPARI+ L + P KY IFF+GT ET +L PY ++KDK+GK
Sbjct: 18 KMKGYPHWPARIDELPEGAVKPPANKYPIFFFGTHETAFLGPKDLLPYKDYKDKFGK 74
>MGI|MGI:1194492 [details] [associations]
symbol:Hdgfrp2 "hepatoma-derived growth factor, related
protein 2" species:10090 "Mus musculus" [GO:0003674
"molecular_function" evidence=ND] [GO:0003677 "DNA binding"
evidence=IEA] [GO:0005575 "cellular_component" evidence=ND]
[GO:0005634 "nucleus" evidence=IEA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR017923 MGI:MGI:1194492 Pfam:PF00855
GO:GO:0005634 GO:GO:0003677 GO:GO:0006351 InterPro:IPR000313
PROSITE:PS50812 SMART:SM00293 Gene3D:1.20.930.10
GeneTree:ENSGT00530000063013 CTD:84717 eggNOG:NOG80217
HOGENOM:HOG000230488 HOVERGEN:HBG099722 InterPro:IPR021567
Pfam:PF11467 EMBL:D63850 EMBL:AK143616 EMBL:AK144669 EMBL:AK146813
EMBL:AK146918 EMBL:BC003741 IPI:IPI00116442 IPI:IPI00875101
IPI:IPI00885518 PIR:JC5662 RefSeq:NP_032259.1 UniGene:Mm.279188
ProteinModelPortal:Q3UMU9 SMR:Q3UMU9 STRING:Q3UMU9
PhosphoSite:Q3UMU9 PaxDb:Q3UMU9 PRIDE:Q3UMU9
Ensembl:ENSMUST00000002911 GeneID:15193 KEGG:mmu:15193
UCSC:uc008dau.1 UCSC:uc008dav.2 UCSC:uc008daw.1 InParanoid:Q3UMU9
OMA:ANKEVME OrthoDB:EOG4WWRKK NextBio:287723 Bgee:Q3UMU9
CleanEx:MM_HDGFRP2 Genevestigator:Q3UMU9 Uniprot:Q3UMU9
Length = 669
Score = 158 (60.7 bits), Expect = 1.5e-07, Sum P(2) = 1.5e-07
Identities = 35/73 (47%), Positives = 45/73 (61%)
Query: 174 VPEAY--GDTKTLQEGEVRGYPPWPARIEGLADET--PNRLKYHIFFYGTRETGICRQDE 229
+P A+ GD L +++GYP WPARI+ +AD P KY IFF+GT ET +
Sbjct: 1 MPHAFKPGD---LVFAKMKGYPHWPARIDDIADGAVKPPPNKYPIFFFGTHETAFLGPKD 57
Query: 230 LFPYTEFKDKYGK 242
LFPY + KDKYGK
Sbjct: 58 LFPYDKCKDKYGK 70
Score = 46 (21.3 bits), Expect = 1.5e-07, Sum P(2) = 1.5e-07
Identities = 12/27 (44%), Positives = 13/27 (48%)
Query: 779 DLSSQEASEKRSPNDFALWKKSKAGEP 805
D S SEK S DF KK+ A P
Sbjct: 188 DSESPSESEKTSDQDFTPEKKTAARPP 214
>RGD|621013 [details] [associations]
symbol:Hdgfrp2 "hepatoma-derived growth factor-related protein 2"
species:10116 "Rattus norvegicus" [GO:0003677 "DNA binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] InterPro:IPR017923
Pfam:PF00855 RGD:621013 GO:GO:0005634 GO:GO:0003677 GO:GO:0006351
InterPro:IPR000313 PROSITE:PS50812 SMART:SM00293 Gene3D:1.20.930.10
CTD:84717 HOVERGEN:HBG099722 InterPro:IPR021567 Pfam:PF11467
EMBL:AF355102 EMBL:BC071178 EMBL:BC087695 IPI:IPI00391633
IPI:IPI00886466 RefSeq:NP_598232.1 UniGene:Rn.29462 HSSP:Q9JMG7
ProteinModelPortal:Q925G1 SMR:Q925G1 PRIDE:Q925G1 GeneID:171073
KEGG:rno:171073 NextBio:621679 Genevestigator:Q925G1 Uniprot:Q925G1
Length = 669
Score = 158 (60.7 bits), Expect = 2.0e-07, Sum P(2) = 2.0e-07
Identities = 35/73 (47%), Positives = 45/73 (61%)
Query: 174 VPEAY--GDTKTLQEGEVRGYPPWPARIEGLADET--PNRLKYHIFFYGTRETGICRQDE 229
+P A+ GD L +++GYP WPARI+ +AD P KY IFF+GT ET +
Sbjct: 1 MPHAFKPGD---LVFAKMKGYPHWPARIDDIADGAVKPPPNKYPIFFFGTHETAFLGPKD 57
Query: 230 LFPYTEFKDKYGK 242
LFPY + KDKYGK
Sbjct: 58 LFPYDKCKDKYGK 70
Score = 45 (20.9 bits), Expect = 2.0e-07, Sum P(2) = 2.0e-07
Identities = 16/37 (43%), Positives = 18/37 (48%)
Query: 779 DLSSQEASEKRSPNDFALWKKSKAGEPWWSSPWGEGR 815
D S SEK S DF KK+ A P +P G GR
Sbjct: 188 DSESPSESEKTSDQDFTPEKKTIARAPR-RAPLG-GR 222
>ZFIN|ZDB-GENE-050522-104 [details] [associations]
symbol:psip1 "PC4 and SFRS1 interacting protein 1"
species:7955 "Danio rerio" [GO:0003674 "molecular_function"
evidence=ND] [GO:0008150 "biological_process" evidence=ND]
Pfam:PF00855 ZFIN:ZDB-GENE-050522-104 InterPro:IPR000313
PROSITE:PS50812 SMART:SM00293 HOGENOM:HOG000230488
InterPro:IPR021567 Pfam:PF11467 HOVERGEN:HBG108300 EMBL:BC076307
IPI:IPI00509636 UniGene:Dr.76433 ProteinModelPortal:Q6DGN4
STRING:Q6DGN4 PRIDE:Q6DGN4 InParanoid:Q6DGN4 Bgee:Q6DGN4
Uniprot:Q6DGN4
Length = 418
Score = 151 (58.2 bits), Expect = 2.6e-07, P = 2.6e-07
Identities = 27/57 (47%), Positives = 38/57 (66%)
Query: 188 EVRGYPPWPARIEGLADET--PNRLKYHIFFYGTRETGICRQDELFPYTEFKDKYGK 242
+++GYP WPARI+ + D P+ +K+ IFF+GT ET ++FPY KDKYGK
Sbjct: 26 KMKGYPHWPARIDEIPDGAVKPSNIKFPIFFFGTHETAFLGPKDIFPYLTNKDKYGK 82
>UNIPROTKB|Q7Z4V5 [details] [associations]
symbol:HDGFRP2 "Hepatoma-derived growth factor-related
protein 2" species:9606 "Homo sapiens" [GO:0003677 "DNA binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] InterPro:IPR017923
Pfam:PF00855 GO:GO:0005634 GO:GO:0003677 GO:GO:0006351
EMBL:CH471139 InterPro:IPR000313 PROSITE:PS50812 SMART:SM00293
Gene3D:1.20.930.10 EMBL:AF294267 EMBL:AY358600 EMBL:BC000755
EMBL:BC009449 IPI:IPI00013290 IPI:IPI01018333 RefSeq:NP_001001520.1
RefSeq:NP_116020.1 UniGene:Hs.43071 PDB:3EAE PDB:3QBY PDB:3QJ6
PDBsum:3EAE PDBsum:3QBY PDBsum:3QJ6 ProteinModelPortal:Q7Z4V5
SMR:Q7Z4V5 IntAct:Q7Z4V5 PhosphoSite:Q7Z4V5 DMDM:74738715
PaxDb:Q7Z4V5 PeptideAtlas:Q7Z4V5 PRIDE:Q7Z4V5 GeneID:84717
KEGG:hsa:84717 UCSC:uc002mao.3 UCSC:uc002map.3 CTD:84717
GeneCards:GC19P004472 neXtProt:NX_Q7Z4V5 eggNOG:NOG80217
HOGENOM:HOG000230488 HOVERGEN:HBG099722 InParanoid:Q7Z4V5
ChiTaRS:HDGFRP2 EvolutionaryTrace:Q7Z4V5 GenomeRNAi:84717
NextBio:74813 PMAP-CutDB:Q7Z4V5 ArrayExpress:Q7Z4V5 Bgee:Q7Z4V5
Genevestigator:Q7Z4V5 InterPro:IPR021567 Pfam:PF11467
Uniprot:Q7Z4V5
Length = 671
Score = 158 (60.7 bits), Expect = 6.5e-07, Sum P(2) = 6.5e-07
Identities = 35/73 (47%), Positives = 45/73 (61%)
Query: 174 VPEAY--GDTKTLQEGEVRGYPPWPARIEGLADET--PNRLKYHIFFYGTRETGICRQDE 229
+P A+ GD L +++GYP WPARI+ +AD P KY IFF+GT ET +
Sbjct: 1 MPHAFKPGD---LVFAKMKGYPHWPARIDDIADGAVKPPPNKYPIFFFGTHETAFLGPKD 57
Query: 230 LFPYTEFKDKYGK 242
LFPY + KDKYGK
Sbjct: 58 LFPYDKCKDKYGK 70
Score = 40 (19.1 bits), Expect = 6.5e-07, Sum P(2) = 6.5e-07
Identities = 12/25 (48%), Positives = 13/25 (52%)
Query: 781 SSQEASEKRSPNDFALWKKSKAGEP 805
SS E SEK S DF KK+ P
Sbjct: 192 SSSE-SEKTSDQDFTPEKKAAVRAP 215
>UNIPROTKB|K7EQZ6 [details] [associations]
symbol:HDGFRP2 "Hepatoma-derived growth factor-related
protein 2" species:9606 "Homo sapiens" [GO:0003677 "DNA binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] InterPro:IPR017923
Pfam:PF00855 InterPro:IPR000313 PROSITE:PS50812 SMART:SM00293
EMBL:AC011498 Gene3D:1.20.930.10 InterPro:IPR021567 Pfam:PF11467
Ensembl:ENST00000586684 Uniprot:K7EQZ6
Length = 675
Score = 158 (60.7 bits), Expect = 6.6e-07, Sum P(2) = 6.6e-07
Identities = 35/73 (47%), Positives = 45/73 (61%)
Query: 174 VPEAY--GDTKTLQEGEVRGYPPWPARIEGLADET--PNRLKYHIFFYGTRETGICRQDE 229
+P A+ GD L +++GYP WPARI+ +AD P KY IFF+GT ET +
Sbjct: 1 MPHAFKPGD---LVFAKMKGYPHWPARIDDIADGAVKPPPNKYPIFFFGTHETAFLGPKD 57
Query: 230 LFPYTEFKDKYGK 242
LFPY + KDKYGK
Sbjct: 58 LFPYDKCKDKYGK 70
Score = 40 (19.1 bits), Expect = 6.6e-07, Sum P(2) = 6.6e-07
Identities = 12/25 (48%), Positives = 13/25 (52%)
Query: 781 SSQEASEKRSPNDFALWKKSKAGEP 805
SS E SEK S DF KK+ P
Sbjct: 192 SSSE-SEKTSDQDFTPEKKAAVRAP 215
>UNIPROTKB|I3L080 [details] [associations]
symbol:HDGFRP2 "Hepatoma-derived growth factor-related
protein 2" species:9606 "Homo sapiens" [GO:0003677 "DNA binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] InterPro:IPR017923
Pfam:PF00855 GO:GO:0005634 GO:GO:0003677 GO:GO:0006351
InterPro:IPR000313 PROSITE:PS50812 SMART:SM00293 EMBL:AC011498
Gene3D:1.20.930.10 ChiTaRS:HDGFRP2 InterPro:IPR021567 Pfam:PF11467
OMA:ANKEVME ProteinModelPortal:I3L080 SMR:I3L080 PRIDE:I3L080
Ensembl:ENST00000301284 PhylomeDB:I3L080 Bgee:I3L080 Uniprot:I3L080
Length = 676
Score = 158 (60.7 bits), Expect = 6.6e-07, Sum P(2) = 6.6e-07
Identities = 35/73 (47%), Positives = 45/73 (61%)
Query: 174 VPEAY--GDTKTLQEGEVRGYPPWPARIEGLADET--PNRLKYHIFFYGTRETGICRQDE 229
+P A+ GD L +++GYP WPARI+ +AD P KY IFF+GT ET +
Sbjct: 1 MPHAFKPGD---LVFAKMKGYPHWPARIDDIADGAVKPPPNKYPIFFFGTHETAFLGPKD 57
Query: 230 LFPYTEFKDKYGK 242
LFPY + KDKYGK
Sbjct: 58 LFPYDKCKDKYGK 70
Score = 40 (19.1 bits), Expect = 6.6e-07, Sum P(2) = 6.6e-07
Identities = 12/25 (48%), Positives = 13/25 (52%)
Query: 781 SSQEASEKRSPNDFALWKKSKAGEP 805
SS E SEK S DF KK+ P
Sbjct: 192 SSSE-SEKTSDQDFTPEKKAAVRAP 215
>UNIPROTKB|F1S7K5 [details] [associations]
symbol:LOC100526035 "Uncharacterized protein" species:9823
"Sus scrofa" [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0003677 "DNA
binding" evidence=IEA] InterPro:IPR017923 Pfam:PF00855
GO:GO:0005634 GO:GO:0003677 GO:GO:0006351 InterPro:IPR000313
PROSITE:PS50812 SMART:SM00293 Gene3D:1.20.930.10
GeneTree:ENSGT00530000063013 InterPro:IPR021567 Pfam:PF11467
OMA:ANKEVME EMBL:CU972396 Ensembl:ENSSSCT00000014758 Uniprot:F1S7K5
Length = 667
Score = 158 (60.7 bits), Expect = 8.0e-07, Sum P(2) = 8.0e-07
Identities = 35/73 (47%), Positives = 45/73 (61%)
Query: 174 VPEAY--GDTKTLQEGEVRGYPPWPARIEGLADET--PNRLKYHIFFYGTRETGICRQDE 229
+P A+ GD L +++GYP WPARI+ +AD P KY IFF+GT ET +
Sbjct: 1 MPHAFKPGD---LVFAKMKGYPHWPARIDDIADGAVKPPPNKYPIFFFGTHETAFLGPKD 57
Query: 230 LFPYTEFKDKYGK 242
LFPY + KDKYGK
Sbjct: 58 LFPYDKCKDKYGK 70
Score = 39 (18.8 bits), Expect = 8.0e-07, Sum P(2) = 8.0e-07
Identities = 12/25 (48%), Positives = 13/25 (52%)
Query: 781 SSQEASEKRSPNDFALWKKSKAGEP 805
SS E SEK S DF KK+ P
Sbjct: 189 SSSE-SEKTSDQDFTPEKKAVVRAP 212
>MGI|MGI:1194494 [details] [associations]
symbol:Hdgf "hepatoma-derived growth factor" species:10090
"Mus musculus" [GO:0000122 "negative regulation of transcription
from RNA polymerase II promoter" evidence=ISO] [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0001106 "RNA polymerase II
transcription corepressor activity" evidence=ISO] [GO:0001222
"transcription corepressor binding" evidence=ISO] [GO:0003677 "DNA
binding" evidence=IEA] [GO:0005615 "extracellular space"
evidence=ISO;IDA] [GO:0005634 "nucleus" evidence=ISO;IDA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0008083 "growth
factor activity" evidence=ISO] [GO:0008201 "heparin binding"
evidence=IEA] [GO:0009987 "cellular process" evidence=IDA]
[GO:0017053 "transcriptional repressor complex" evidence=ISO]
[GO:0034504 "protein localization to nucleus" evidence=ISO]
[GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=ISO] MGI:MGI:1194494 Pfam:PF00855
GO:GO:0005634 GO:GO:0005737 GO:GO:0005615 GO:GO:0006355
GO:GO:0000166 GO:GO:0003677 GO:GO:0008201 GO:GO:0006351
GO:GO:0008083 GO:GO:0009987 InterPro:IPR000313 PROSITE:PS50812
SMART:SM00293 CTD:3068 eggNOG:NOG240243 HOGENOM:HOG000112874
HOVERGEN:HBG010574 KO:K16641 OrthoDB:EOG4PK28W ChiTaRS:HDGF
EMBL:D63707 EMBL:AF251787 EMBL:AK017863 EMBL:AK029475 EMBL:AK076021
EMBL:BC005713 EMBL:BC021654 IPI:IPI00313817 PIR:JC5660
RefSeq:NP_032257.3 UniGene:Mm.292208 ProteinModelPortal:P51859
SMR:P51859 IntAct:P51859 STRING:P51859 PhosphoSite:P51859
PaxDb:P51859 PRIDE:P51859 Ensembl:ENSMUST00000005017 GeneID:15191
KEGG:mmu:15191 UCSC:uc008ptc.2 GeneTree:ENSGT00530000063013
InParanoid:P51859 OMA:KGSARGC NextBio:287715 PMAP-CutDB:P51859
Bgee:P51859 CleanEx:MM_HDGF Genevestigator:P51859
GermOnline:ENSMUSG00000004897 Uniprot:P51859
Length = 237
Score = 140 (54.3 bits), Expect = 8.5e-07, P = 8.5e-07
Identities = 25/57 (43%), Positives = 36/57 (63%)
Query: 188 EVRGYPPWPARIEGLADETPNRL--KYHIFFYGTRETGICRQDELFPYTEFKDKYGK 242
+++GYP WPARI+ + + KY +FF+GT ET +LFPY E K+K+GK
Sbjct: 19 KMKGYPHWPARIDEMPEAAVKSTANKYQVFFFGTHETAFLGPKDLFPYEESKEKFGK 75
>RGD|70961 [details] [associations]
symbol:Hdgf "hepatoma-derived growth factor" species:10116 "Rattus
norvegicus" [GO:0000122 "negative regulation of transcription from
RNA polymerase II promoter" evidence=ISO;IDA] [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0001106 "RNA polymerase II
transcription corepressor activity" evidence=ISO] [GO:0001222
"transcription corepressor binding" evidence=ISO] [GO:0003677 "DNA
binding" evidence=IEA] [GO:0005615 "extracellular space"
evidence=IEA;ISO] [GO:0005634 "nucleus" evidence=IEA;ISO;IDA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0008083 "growth factor activity"
evidence=IEA] [GO:0008201 "heparin binding" evidence=IEA]
[GO:0009987 "cellular process" evidence=IEA;ISO] [GO:0017053
"transcriptional repressor complex" evidence=ISO] [GO:0034504
"protein localization to nucleus" evidence=IDA] [GO:0045944
"positive regulation of transcription from RNA polymerase II
promoter" evidence=IDA] Pfam:PF00855 RGD:70961 GO:GO:0005634
GO:GO:0005737 GO:GO:0005615 GO:GO:0000166 GO:GO:0003677
GO:GO:0045944 GO:GO:0008201 GO:GO:0006351 GO:GO:0000122
InterPro:IPR000313 PROSITE:PS50812 GO:GO:0034504 SMART:SM00293
CTD:3068 eggNOG:NOG240243 HOGENOM:HOG000112874 HOVERGEN:HBG010574
KO:K16641 OrthoDB:EOG4PK28W EMBL:AF448810 EMBL:AF389348
EMBL:BC070943 IPI:IPI00326566 RefSeq:NP_446159.1 UniGene:Rn.860
PDB:2B8A PDBsum:2B8A ProteinModelPortal:Q8VHK7 SMR:Q8VHK7
STRING:Q8VHK7 PhosphoSite:Q8VHK7 PRIDE:Q8VHK7 GeneID:114499
KEGG:rno:114499 UCSC:RGD:70961 InParanoid:Q8VHK7
EvolutionaryTrace:Q8VHK7 NextBio:618555 ArrayExpress:Q8VHK7
Genevestigator:Q8VHK7 Uniprot:Q8VHK7
Length = 237
Score = 140 (54.3 bits), Expect = 8.5e-07, P = 8.5e-07
Identities = 25/57 (43%), Positives = 36/57 (63%)
Query: 188 EVRGYPPWPARIEGLADETPNRL--KYHIFFYGTRETGICRQDELFPYTEFKDKYGK 242
+++GYP WPARI+ + + KY +FF+GT ET +LFPY E K+K+GK
Sbjct: 19 KMKGYPHWPARIDEMPEAAVKSTANKYQVFFFGTHETAFLGPKDLFPYEESKEKFGK 75
>UNIPROTKB|Q8VHK7 [details] [associations]
symbol:Hdgf "Hepatoma-derived growth factor" species:10116
"Rattus norvegicus" [GO:0005615 "extracellular space" evidence=IEA]
Pfam:PF00855 RGD:70961 GO:GO:0005634 GO:GO:0005737 GO:GO:0005615
GO:GO:0000166 GO:GO:0003677 GO:GO:0045944 GO:GO:0008201
GO:GO:0006351 GO:GO:0000122 InterPro:IPR000313 PROSITE:PS50812
GO:GO:0034504 SMART:SM00293 CTD:3068 eggNOG:NOG240243
HOGENOM:HOG000112874 HOVERGEN:HBG010574 KO:K16641 OrthoDB:EOG4PK28W
EMBL:AF448810 EMBL:AF389348 EMBL:BC070943 IPI:IPI00326566
RefSeq:NP_446159.1 UniGene:Rn.860 PDB:2B8A PDBsum:2B8A
ProteinModelPortal:Q8VHK7 SMR:Q8VHK7 STRING:Q8VHK7
PhosphoSite:Q8VHK7 PRIDE:Q8VHK7 GeneID:114499 KEGG:rno:114499
UCSC:RGD:70961 InParanoid:Q8VHK7 EvolutionaryTrace:Q8VHK7
NextBio:618555 ArrayExpress:Q8VHK7 Genevestigator:Q8VHK7
Uniprot:Q8VHK7
Length = 237
Score = 140 (54.3 bits), Expect = 8.5e-07, P = 8.5e-07
Identities = 25/57 (43%), Positives = 36/57 (63%)
Query: 188 EVRGYPPWPARIEGLADETPNRL--KYHIFFYGTRETGICRQDELFPYTEFKDKYGK 242
+++GYP WPARI+ + + KY +FF+GT ET +LFPY E K+K+GK
Sbjct: 19 KMKGYPHWPARIDEMPEAAVKSTANKYQVFFFGTHETAFLGPKDLFPYEESKEKFGK 75
>UNIPROTKB|Q9XSK7 [details] [associations]
symbol:HDGF "Hepatoma-derived growth factor" species:9913
"Bos taurus" [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0008201 "heparin binding" evidence=IEA]
[GO:0008083 "growth factor activity" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] [GO:0000166 "nucleotide
binding" evidence=IEA] Pfam:PF00855 GO:GO:0005634 GO:GO:0005737
GO:GO:0006355 GO:GO:0000166 GO:GO:0003677 GO:GO:0008201
GO:GO:0006351 InterPro:IPR000313 PROSITE:PS50812 SMART:SM00293
EMBL:AJ237996 IPI:IPI00696746 RefSeq:NP_787026.1 UniGene:Bt.4705
ProteinModelPortal:Q9XSK7 SMR:Q9XSK7 STRING:Q9XSK7 PRIDE:Q9XSK7
GeneID:327953 KEGG:bta:327953 CTD:3068 eggNOG:NOG240243
HOGENOM:HOG000112874 HOVERGEN:HBG010574 InParanoid:Q9XSK7 KO:K16641
OrthoDB:EOG4PK28W NextBio:20810183 Uniprot:Q9XSK7
Length = 239
Score = 140 (54.3 bits), Expect = 8.9e-07, P = 8.9e-07
Identities = 25/57 (43%), Positives = 36/57 (63%)
Query: 188 EVRGYPPWPARIEGLADETPNRL--KYHIFFYGTRETGICRQDELFPYTEFKDKYGK 242
+++GYP WPARI+ + + KY +FF+GT ET +LFPY E K+K+GK
Sbjct: 19 KMKGYPHWPARIDEMPEAAVKSTANKYQVFFFGTHETAFLGPKDLFPYEESKEKFGK 75
>UNIPROTKB|P51858 [details] [associations]
symbol:HDGF "Hepatoma-derived growth factor" species:9606
"Homo sapiens" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] [GO:0008083 "growth factor
activity" evidence=IEA] [GO:0008201 "heparin binding" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0007165 "signal
transduction" evidence=NAS] [GO:0008283 "cell proliferation"
evidence=TAS] [GO:0005654 "nucleoplasm" evidence=TAS] [GO:0006987
"activation of signaling protein activity involved in unfolded
protein response" evidence=TAS] [GO:0030968 "endoplasmic reticulum
unfolded protein response" evidence=TAS] [GO:0005615 "extracellular
space" evidence=IDA] [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=IDA]
[GO:0001106 "RNA polymerase II transcription corepressor activity"
evidence=IDA] [GO:0017053 "transcriptional repressor complex"
evidence=IDA] [GO:0001222 "transcription corepressor binding"
evidence=IPI] EMBL:D16431 Pfam:PF00855 GO:GO:0005737
Reactome:REACT_116125 GO:GO:0017053 GO:GO:0005615 GO:GO:0006987
GO:GO:0000166 GO:GO:0003677 GO:GO:0008283 GO:GO:0008201
EMBL:CH471121 GO:GO:0001106 InterPro:IPR000313 PROSITE:PS50812
SMART:SM00293 CTD:3068 eggNOG:NOG240243 HOGENOM:HOG000112874
HOVERGEN:HBG010574 KO:K16641 OrthoDB:EOG4PK28W EMBL:AK096411
EMBL:AL590666 EMBL:BC018991 IPI:IPI00020956 IPI:IPI00514330
PIR:A55055 RefSeq:NP_001119522.1 RefSeq:NP_001119523.1
RefSeq:NP_004485.1 UniGene:Hs.741151 PDB:1RI0 PDB:2NLU PDBsum:1RI0
PDBsum:2NLU ProteinModelPortal:P51858 SMR:P51858 IntAct:P51858
STRING:P51858 PhosphoSite:P51858 DMDM:1708157 PaxDb:P51858
PeptideAtlas:P51858 PRIDE:P51858 DNASU:3068 Ensembl:ENST00000357325
Ensembl:ENST00000368209 Ensembl:ENST00000537739 GeneID:3068
KEGG:hsa:3068 UCSC:uc001fpy.4 GeneCards:GC01M156711 HGNC:HGNC:4856
HPA:CAB026035 MIM:600339 neXtProt:NX_P51858 PharmGKB:PA29234
PhylomeDB:P51858 ChiTaRS:HDGF EvolutionaryTrace:P51858
GenomeRNAi:3068 NextBio:12137 ArrayExpress:P51858 Bgee:P51858
CleanEx:HS_HDGF Genevestigator:P51858 GermOnline:ENSG00000143321
Uniprot:P51858
Length = 240
Score = 140 (54.3 bits), Expect = 9.1e-07, P = 9.1e-07
Identities = 25/57 (43%), Positives = 36/57 (63%)
Query: 188 EVRGYPPWPARIEGLADETPNRL--KYHIFFYGTRETGICRQDELFPYTEFKDKYGK 242
+++GYP WPARI+ + + KY +FF+GT ET +LFPY E K+K+GK
Sbjct: 19 KMKGYPHWPARIDEMPEAAVKSTANKYQVFFFGTHETAFLGPKDLFPYEESKEKFGK 75
>UNIPROTKB|F1NXS9 [details] [associations]
symbol:PSIP1 "Lens epithelium-derived growth factor"
species:9031 "Gallus gallus" [GO:0003677 "DNA binding"
evidence=IEA] InterPro:IPR017956 SMART:SM00384 Pfam:PF00855
GO:GO:0003677 InterPro:IPR000313 PROSITE:PS50812 SMART:SM00293
GeneTree:ENSGT00530000063013 EMBL:AADN02057486 EMBL:AADN02057487
EMBL:AADN02057488 EMBL:AADN02057489 EMBL:AADN02057490
IPI:IPI00818325 Ensembl:ENSGALT00000038309 ArrayExpress:F1NXS9
Uniprot:F1NXS9
Length = 342
Score = 144 (55.7 bits), Expect = 9.9e-07, P = 9.9e-07
Identities = 27/57 (47%), Positives = 37/57 (64%)
Query: 188 EVRGYPPWPARIEGLADET--PNRLKYHIFFYGTRETGICRQDELFPYTEFKDKYGK 242
+++GYP WPAR++ + D P K IFF+GT ET ++FPY+E KDKYGK
Sbjct: 14 KMKGYPHWPARVDEVPDGAVKPPTNKMPIFFFGTHETAFLGPKDIFPYSENKDKYGK 70
>UNIPROTKB|Q5TGJ6 [details] [associations]
symbol:HDGFL1 "Hepatoma-derived growth factor-like protein
1" species:9606 "Homo sapiens" [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=IEA]
[GO:0034504 "protein localization to nucleus" evidence=IEA]
[GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=IEA] Pfam:PF00855 EMBL:CH471087
InterPro:IPR000313 PROSITE:PS50812 SMART:SM00293 HSSP:P51858
eggNOG:NOG240243 HOGENOM:HOG000112874 HOVERGEN:HBG010574 KO:K16641
EMBL:AK056824 EMBL:AL033539 IPI:IPI00102259 RefSeq:NP_612641.2
UniGene:Hs.629246 ProteinModelPortal:Q5TGJ6 SMR:Q5TGJ6
STRING:Q5TGJ6 DMDM:74746497 PaxDb:Q5TGJ6 PRIDE:Q5TGJ6 DNASU:154150
Ensembl:ENST00000230012 Ensembl:ENST00000510882 GeneID:154150
KEGG:hsa:154150 UCSC:uc003nds.3 CTD:154150 GeneCards:GC06P022569
HGNC:HGNC:21095 HPA:HPA045679 neXtProt:NX_Q5TGJ6
PharmGKB:PA134981303 InParanoid:Q5TGJ6 OMA:PTVQASD
OrthoDB:EOG4TXBSX PhylomeDB:Q5TGJ6 GenomeRNAi:154150 NextBio:87247
Bgee:Q5TGJ6 CleanEx:HS_HDGFL1 Genevestigator:Q5TGJ6 Uniprot:Q5TGJ6
Length = 251
Score = 140 (54.3 bits), Expect = 1.1e-06, P = 1.1e-06
Identities = 27/55 (49%), Positives = 35/55 (63%)
Query: 188 EVRGYPPWPARIEGLADETPNRLKYHIFFYGTRETGICRQDELFPYTEFKDKYGK 242
+++GY WPARIE + PNR Y +FF+GT ET LFPY E K+K+GK
Sbjct: 18 KLKGYAHWPARIEHMTQ--PNR--YQVFFFGTHETAFLSPKRLFPYKECKEKFGK 68
>UNIPROTKB|F1SMR3 [details] [associations]
symbol:PSIP1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0034399 "nuclear periphery" evidence=IEA] [GO:0033613
"activating transcription factor binding" evidence=IEA] [GO:0009408
"response to heat" evidence=IEA] [GO:0006979 "response to oxidative
stress" evidence=IEA] [GO:0005720 "nuclear heterochromatin"
evidence=IEA] [GO:0003682 "chromatin binding" evidence=IEA]
[GO:0001105 "RNA polymerase II transcription coactivator activity"
evidence=IEA] [GO:0000395 "mRNA 5'-splice site recognition"
evidence=IEA] Pfam:PF00855 GO:GO:0006979 GO:GO:0005720
GO:GO:0003682 GO:GO:0009408 GO:GO:0001105 GO:GO:0034399
InterPro:IPR000313 PROSITE:PS50812 SMART:SM00293
GeneTree:ENSGT00530000063013 GO:GO:0000395 CTD:11168 EMBL:CU075375
RefSeq:NP_001230599.1 UniGene:Ssc.2868 Ensembl:ENSSSCT00000005714
GeneID:100157597 KEGG:ssc:100157597 OMA:KHEASSK Uniprot:F1SMR3
Length = 333
Score = 143 (55.4 bits), Expect = 1.2e-06, P = 1.2e-06
Identities = 39/137 (28%), Positives = 66/137 (48%)
Query: 188 EVRGYPPWPARIEGLADET--PNRLKYHIFFYGTRETGICRQDELFPYTEFKDKYGKVRV 245
+++GYP WPAR++ + D P K IFF+GT ET ++FPY+E K+KYGK
Sbjct: 14 KMKGYPHWPARVDEVPDGAVKPPTNKLPIFFFGTHETAFLGPKDIFPYSENKEKYGK--- 70
Query: 246 HLSQKQQSLKLVVIMKEFFLNVKDHIRNLKFPATTVSSFEKWTQADLELSTR--FIQTKN 303
K++ E + D+ +KF + S+ + +D+E+ + + ++
Sbjct: 71 --PNKRKGFN------EGLWEI-DNNPKVKFSSQQASAKQSNASSDVEVEEKETSVSKED 121
Query: 304 NVHAALCDNMDTRSALD 320
H N D A+D
Sbjct: 122 TDHEEKASNEDMTKAID 138
>UNIPROTKB|D2H2Y2 [details] [associations]
symbol:PANDA_004016 "Putative uncharacterized protein"
species:9646 "Ailuropoda melanoleuca" [GO:0000395 "mRNA 5'-splice
site recognition" evidence=ISS] [GO:0001105 "RNA polymerase II
transcription coactivator activity" evidence=ISS] [GO:0003682
"chromatin binding" evidence=ISS] [GO:0005720 "nuclear
heterochromatin" evidence=ISS] [GO:0006979 "response to oxidative
stress" evidence=ISS] [GO:0009408 "response to heat" evidence=ISS]
[GO:0033613 "activating transcription factor binding" evidence=ISS]
[GO:0035327 "transcriptionally active chromatin" evidence=ISS]
[GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=ISS] [GO:0097100 "supercoiled DNA
binding" evidence=ISS] Pfam:PF00855 GO:GO:0006979 GO:GO:0005720
GO:GO:0003682 GO:GO:0009408 GO:GO:0001105 GO:GO:0035327
InterPro:IPR000313 PROSITE:PS50812 SMART:SM00293 GO:GO:0097100
GO:GO:0033613 InterPro:IPR021567 Pfam:PF11467 GO:GO:0000395
InterPro:IPR017859 PRINTS:PR01503 EMBL:GL192451 Uniprot:D2H2Y2
Length = 511
Score = 144 (55.7 bits), Expect = 2.1e-06, P = 2.1e-06
Identities = 39/137 (28%), Positives = 66/137 (48%)
Query: 188 EVRGYPPWPARIEGLADET--PNRLKYHIFFYGTRETGICRQDELFPYTEFKDKYGKVRV 245
+++GYP WPAR++ + D P K IFF+GT ET ++FPY+E K+KYGK
Sbjct: 14 KMKGYPHWPARVDEVPDGAVKPPTNKLPIFFFGTHETAFLGPKDIFPYSENKEKYGK--- 70
Query: 246 HLSQKQQSLKLVVIMKEFFLNVKDHIRNLKFPATTVSSFEKWTQADLELSTR--FIQTKN 303
K++ E + D+ +KF + S+ + +D+E+ + + ++
Sbjct: 71 --PNKRKGFN------EGLWEI-DNNPKVKFSSQQASTKQSNASSDVEVEEKETSVSKED 121
Query: 304 NVHAALCDNMDTRSALD 320
H N D A+D
Sbjct: 122 TDHEEKASNEDVTKAID 138
>UNIPROTKB|A1YAF7 [details] [associations]
symbol:PSIP1 "LEDGF/p75" species:9796 "Equus caballus"
[GO:0000395 "mRNA 5'-splice site recognition" evidence=ISS]
[GO:0001105 "RNA polymerase II transcription coactivator activity"
evidence=ISS] [GO:0003682 "chromatin binding" evidence=ISS]
[GO:0005720 "nuclear heterochromatin" evidence=ISS] [GO:0006979
"response to oxidative stress" evidence=ISS] [GO:0009408 "response
to heat" evidence=ISS] [GO:0033613 "activating transcription factor
binding" evidence=ISS] [GO:0035327 "transcriptionally active
chromatin" evidence=ISS] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=ISS]
[GO:0097100 "supercoiled DNA binding" evidence=ISS] Pfam:PF00855
GO:GO:0006979 GO:GO:0005720 GO:GO:0003682 GO:GO:0009408
GO:GO:0001105 GO:GO:0035327 GO:GO:0034399 InterPro:IPR000313
PROSITE:PS50812 SMART:SM00293 GO:GO:0097100 GO:GO:0033613
GeneTree:ENSGT00530000063013 HOGENOM:HOG000230488
InterPro:IPR021567 Pfam:PF11467 GO:GO:0000395 CTD:11168
HOVERGEN:HBG108300 InterPro:IPR017859 PRINTS:PR01503 OMA:ESKDSHE
EMBL:DQ873682 RefSeq:NP_001075982.1 UniGene:Eca.3369 SMR:A1YAF7
STRING:A1YAF7 Ensembl:ENSECAT00000013750 GeneID:100034217
KEGG:ecb:100034217 InParanoid:A1YAF7 Uniprot:A1YAF7
Length = 530
Score = 144 (55.7 bits), Expect = 2.3e-06, P = 2.3e-06
Identities = 39/137 (28%), Positives = 66/137 (48%)
Query: 188 EVRGYPPWPARIEGLADET--PNRLKYHIFFYGTRETGICRQDELFPYTEFKDKYGKVRV 245
+++GYP WPAR++ + D P K IFF+GT ET ++FPY+E K+KYGK
Sbjct: 14 KMKGYPHWPARVDEVPDGAVKPPTNKLPIFFFGTHETAFLGPKDIFPYSENKEKYGK--- 70
Query: 246 HLSQKQQSLKLVVIMKEFFLNVKDHIRNLKFPATTVSSFEKWTQADLELSTR--FIQTKN 303
K++ E + D+ +KF + S+ + +D+E+ + + ++
Sbjct: 71 --PNKRKGFN------EGLWEI-DNNPKVKFSSQQASTKQSNASSDVEVEEKETSVSKED 121
Query: 304 NVHAALCDNMDTRSALD 320
H N D A+D
Sbjct: 122 TDHEEKASNEDVTKAID 138
>UNIPROTKB|B8Y8S3 [details] [associations]
symbol:PSIP1 "LEDGF/p75" species:9940 "Ovis aries"
[GO:0000395 "mRNA 5'-splice site recognition" evidence=ISS]
[GO:0001105 "RNA polymerase II transcription coactivator activity"
evidence=ISS] [GO:0003682 "chromatin binding" evidence=ISS]
[GO:0005720 "nuclear heterochromatin" evidence=ISS] [GO:0006979
"response to oxidative stress" evidence=ISS] [GO:0009408 "response
to heat" evidence=ISS] [GO:0033613 "activating transcription factor
binding" evidence=ISS] [GO:0035327 "transcriptionally active
chromatin" evidence=ISS] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=ISS]
[GO:0097100 "supercoiled DNA binding" evidence=ISS] Pfam:PF00855
GO:GO:0006979 GO:GO:0005720 GO:GO:0003682 GO:GO:0009408
GO:GO:0001105 GO:GO:0035327 InterPro:IPR000313 PROSITE:PS50812
SMART:SM00293 GO:GO:0097100 GO:GO:0033613 InterPro:IPR021567
Pfam:PF11467 GO:GO:0000395 CTD:11168 HOVERGEN:HBG108300
InterPro:IPR017859 PRINTS:PR01503 EMBL:FJ497048
RefSeq:NP_001137364.1 UniGene:Oar.10734 GeneID:100233239
Uniprot:B8Y8S3
Length = 530
Score = 144 (55.7 bits), Expect = 2.3e-06, P = 2.3e-06
Identities = 39/137 (28%), Positives = 66/137 (48%)
Query: 188 EVRGYPPWPARIEGLADET--PNRLKYHIFFYGTRETGICRQDELFPYTEFKDKYGKVRV 245
+++GYP WPAR++ + D P K IFF+GT ET ++FPY+E K+KYGK
Sbjct: 14 KMKGYPHWPARVDEVPDGAVKPPTNKLPIFFFGTHETAFLGPKDIFPYSENKEKYGK--- 70
Query: 246 HLSQKQQSLKLVVIMKEFFLNVKDHIRNLKFPATTVSSFEKWTQADLELSTR--FIQTKN 303
K++ E + D+ +KF + S+ + +D+E+ + + ++
Sbjct: 71 --PNKRKGFN------EGLWEI-DNNPKVKFSSQQASAKQSNASSDVEVEEKETSVSKED 121
Query: 304 NVHAALCDNMDTRSALD 320
H N D A+D
Sbjct: 122 TDHEEKASNEDVTKAID 138
>UNIPROTKB|Q66T72 [details] [associations]
symbol:PSIP1 "PC4 and SFRS1-interacting protein"
species:9685 "Felis catus" [GO:0000395 "mRNA 5'-splice site
recognition" evidence=ISS] [GO:0001105 "RNA polymerase II
transcription coactivator activity" evidence=ISS] [GO:0003682
"chromatin binding" evidence=ISS] [GO:0005720 "nuclear
heterochromatin" evidence=ISS] [GO:0006979 "response to oxidative
stress" evidence=ISS] [GO:0009408 "response to heat" evidence=ISS]
[GO:0033613 "activating transcription factor binding" evidence=ISS]
[GO:0035327 "transcriptionally active chromatin" evidence=ISS]
[GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=ISS] [GO:0097100 "supercoiled DNA
binding" evidence=ISS] Pfam:PF00855 GO:GO:0006979 GO:GO:0005720
GO:GO:0003682 GO:GO:0009408 GO:GO:0001105 GO:GO:0035327
InterPro:IPR000313 PROSITE:PS50812 SMART:SM00293 GO:GO:0097100
GO:GO:0033613 GeneTree:ENSGT00530000063013 InterPro:IPR021567
Pfam:PF11467 eggNOG:NOG316844 GO:GO:0000395 CTD:11168
HOVERGEN:HBG108300 InterPro:IPR017859 PRINTS:PR01503 EMBL:AY705213
RefSeq:NP_001009372.1 ProteinModelPortal:Q66T72 SMR:Q66T72
STRING:Q66T72 PRIDE:Q66T72 GeneID:493969 KEGG:fca:493969
Uniprot:Q66T72
Length = 530
Score = 144 (55.7 bits), Expect = 2.3e-06, P = 2.3e-06
Identities = 39/137 (28%), Positives = 66/137 (48%)
Query: 188 EVRGYPPWPARIEGLADET--PNRLKYHIFFYGTRETGICRQDELFPYTEFKDKYGKVRV 245
+++GYP WPAR++ + D P K IFF+GT ET ++FPY+E K+KYGK
Sbjct: 14 KMKGYPHWPARVDEVPDGAVKPPTNKLPIFFFGTHETAFLGPKDIFPYSENKEKYGK--- 70
Query: 246 HLSQKQQSLKLVVIMKEFFLNVKDHIRNLKFPATTVSSFEKWTQADLELSTR--FIQTKN 303
K++ E + D+ +KF + S+ + +D+E+ + + ++
Sbjct: 71 --PNKRKGFN------EGLWEI-DNNPKVKFSSQQASTKQSNASSDVEVEEKETSVSKED 121
Query: 304 NVHAALCDNMDTRSALD 320
H N D A+D
Sbjct: 122 TDHEEKASNEDVTKAID 138
>UNIPROTKB|E2REJ7 [details] [associations]
symbol:PSIP1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0035327 "transcriptionally active chromatin"
evidence=ISS] [GO:0005720 "nuclear heterochromatin" evidence=ISS]
[GO:0033613 "activating transcription factor binding" evidence=ISS]
[GO:0003682 "chromatin binding" evidence=ISS] [GO:0001105 "RNA
polymerase II transcription coactivator activity" evidence=ISS]
[GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=ISS] [GO:0097100 "supercoiled DNA
binding" evidence=ISS] [GO:0000395 "mRNA 5'-splice site
recognition" evidence=ISS] [GO:0009408 "response to heat"
evidence=ISS] [GO:0006979 "response to oxidative stress"
evidence=ISS] Pfam:PF00855 GO:GO:0006979 GO:GO:0005720
GO:GO:0003682 GO:GO:0009408 GO:GO:0001105 GO:GO:0035327
InterPro:IPR000313 PROSITE:PS50812 SMART:SM00293 GO:GO:0097100
GO:GO:0033613 GeneTree:ENSGT00530000063013 InterPro:IPR021567
Pfam:PF11467 GO:GO:0000395 OMA:ESKDSHE EMBL:AAEX03007864
EMBL:AAEX03007865 Ensembl:ENSCAFT00000002423 Uniprot:E2REJ7
Length = 572
Score = 144 (55.7 bits), Expect = 2.5e-06, P = 2.5e-06
Identities = 39/137 (28%), Positives = 66/137 (48%)
Query: 188 EVRGYPPWPARIEGLADET--PNRLKYHIFFYGTRETGICRQDELFPYTEFKDKYGKVRV 245
+++GYP WPAR++ + D P K IFF+GT ET ++FPY+E K+KYGK
Sbjct: 57 KMKGYPHWPARVDEVPDGAVKPPTNKLPIFFFGTHETAFLGPKDIFPYSENKEKYGK--- 113
Query: 246 HLSQKQQSLKLVVIMKEFFLNVKDHIRNLKFPATTVSSFEKWTQADLELSTR--FIQTKN 303
K++ E + D+ +KF + S+ + +D+E+ + + ++
Sbjct: 114 --PNKRKGFN------EGLWEI-DNNPKVKFSSQQASTKQSNASSDVEVEEKETSVSKED 164
Query: 304 NVHAALCDNMDTRSALD 320
H N D A+D
Sbjct: 165 TDHEEKASNEDVTKAID 181
>UNIPROTKB|F1NKN6 [details] [associations]
symbol:PSIP1 "Lens epithelium-derived growth factor"
species:9031 "Gallus gallus" [GO:0003677 "DNA binding"
evidence=IEA] [GO:0000395 "mRNA 5'-splice site recognition"
evidence=IEA] [GO:0001105 "RNA polymerase II transcription
coactivator activity" evidence=IEA] [GO:0003682 "chromatin binding"
evidence=IEA] [GO:0005720 "nuclear heterochromatin" evidence=IEA]
[GO:0006979 "response to oxidative stress" evidence=IEA]
[GO:0009408 "response to heat" evidence=IEA] [GO:0033613
"activating transcription factor binding" evidence=IEA] [GO:0034399
"nuclear periphery" evidence=IEA] InterPro:IPR017956 SMART:SM00384
Pfam:PF00855 GO:GO:0006979 GO:GO:0003677 GO:GO:0005720
GO:GO:0003682 GO:GO:0009408 GO:GO:0001105 GO:GO:0034399
InterPro:IPR000313 PROSITE:PS50812 SMART:SM00293
GeneTree:ENSGT00530000063013 InterPro:IPR021567 Pfam:PF11467
GO:GO:0000395 IPI:IPI00578410 OMA:ESKDSHE EMBL:AADN02057486
EMBL:AADN02057487 EMBL:AADN02057488 EMBL:AADN02057489
EMBL:AADN02057490 Ensembl:ENSGALT00000024372 ArrayExpress:F1NKN6
Uniprot:F1NKN6
Length = 579
Score = 144 (55.7 bits), Expect = 2.6e-06, P = 2.6e-06
Identities = 27/57 (47%), Positives = 37/57 (64%)
Query: 188 EVRGYPPWPARIEGLADET--PNRLKYHIFFYGTRETGICRQDELFPYTEFKDKYGK 242
+++GYP WPAR++ + D P K IFF+GT ET ++FPY+E KDKYGK
Sbjct: 14 KMKGYPHWPARVDEVPDGAVKPPTNKMPIFFFGTHETAFLGPKDIFPYSENKDKYGK 70
>UNIPROTKB|Q5XXA9 [details] [associations]
symbol:PSIP1 "Lens epithelium-derived growth factor"
species:9031 "Gallus gallus" [GO:0005634 "nucleus" evidence=IDA]
[GO:0006979 "response to oxidative stress" evidence=ISS]
[GO:0009408 "response to heat" evidence=ISS] [GO:0035327
"transcriptionally active chromatin" evidence=ISS] [GO:0005720
"nuclear heterochromatin" evidence=ISS] [GO:0045944 "positive
regulation of transcription from RNA polymerase II promoter"
evidence=ISS] [GO:0003682 "chromatin binding" evidence=ISS]
[GO:0033613 "activating transcription factor binding" evidence=ISS]
[GO:0000395 "mRNA 5'-splice site recognition" evidence=ISS]
[GO:0097100 "supercoiled DNA binding" evidence=ISS] [GO:0001105
"RNA polymerase II transcription coactivator activity"
evidence=ISS] InterPro:IPR017956 SMART:SM00384 Pfam:PF00855
GO:GO:0006979 GO:GO:0005720 GO:GO:0003682 GO:GO:0009408
GO:GO:0001105 GO:GO:0035327 InterPro:IPR000313 PROSITE:PS50812
SMART:SM00293 GO:GO:0097100 GO:GO:0033613 HOGENOM:HOG000230488
InterPro:IPR021567 Pfam:PF11467 eggNOG:NOG316844 GO:GO:0000395
CTD:11168 HOVERGEN:HBG108300 OrthoDB:EOG4V438N EMBL:AY728140
IPI:IPI00578410 RefSeq:NP_001026781.2 UniGene:Gga.22262
ProteinModelPortal:Q5XXA9 SMR:Q5XXA9 STRING:Q5XXA9 PRIDE:Q5XXA9
GeneID:431605 KEGG:gga:431605 InParanoid:Q5XXA9 NextBio:20830891
Uniprot:Q5XXA9
Length = 579
Score = 144 (55.7 bits), Expect = 2.6e-06, P = 2.6e-06
Identities = 27/57 (47%), Positives = 37/57 (64%)
Query: 188 EVRGYPPWPARIEGLADET--PNRLKYHIFFYGTRETGICRQDELFPYTEFKDKYGK 242
+++GYP WPAR++ + D P K IFF+GT ET ++FPY+E KDKYGK
Sbjct: 14 KMKGYPHWPARVDEVPDGAVKPPTNKMPIFFFGTHETAFLGPKDIFPYSENKDKYGK 70
>MGI|MGI:2142116 [details] [associations]
symbol:Psip1 "PC4 and SFRS1 interacting protein 1"
species:10090 "Mus musculus" [GO:0000395 "mRNA 5'-splice site
recognition" evidence=ISO] [GO:0001105 "RNA polymerase II
transcription coactivator activity" evidence=ISO] [GO:0003677 "DNA
binding" evidence=IEA] [GO:0003682 "chromatin binding"
evidence=ISO] [GO:0005634 "nucleus" evidence=ISO] [GO:0005654
"nucleoplasm" evidence=ISO] [GO:0005720 "nuclear heterochromatin"
evidence=ISO] [GO:0005730 "nucleolus" evidence=ISO] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0006979 "response to oxidative stress" evidence=IDA]
[GO:0009408 "response to heat" evidence=IDA] [GO:0033613
"activating transcription factor binding" evidence=ISO] [GO:0034399
"nuclear periphery" evidence=ISO] [GO:0035327 "transcriptionally
active chromatin" evidence=ISO] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=ISO]
[GO:0097100 "supercoiled DNA binding" evidence=ISO] MGI:MGI:2142116
Pfam:PF00855 GO:GO:0005654 GO:GO:0006979 GO:GO:0005720
GO:GO:0003682 GO:GO:0009408 GO:GO:0001105 GO:GO:0035327
GO:GO:0034399 InterPro:IPR000313 PROSITE:PS50812 SMART:SM00293
EMBL:BX682545 GO:GO:0097100 GO:GO:0033613
GeneTree:ENSGT00530000063013 InterPro:IPR021567 Pfam:PF11467
eggNOG:NOG316844 GO:GO:0000395 CTD:11168 HOVERGEN:HBG108300
OrthoDB:EOG4V438N InterPro:IPR017859 PRINTS:PR01503 OMA:ESKDSHE
ChiTaRS:PSIP1 EMBL:AJ308965 EMBL:AJ308966 EMBL:AF339082
EMBL:AF339083 EMBL:BC002260 EMBL:BC043079 EMBL:BC052177
EMBL:AK011572 EMBL:AK139598 EMBL:AK161426 EMBL:AK169600
IPI:IPI00115257 IPI:IPI00608118 RefSeq:NP_598709.1
UniGene:Mm.105331 UniGene:Mm.448301 ProteinModelPortal:Q99JF8
SMR:Q99JF8 STRING:Q99JF8 PhosphoSite:Q99JF8 PaxDb:Q99JF8
PRIDE:Q99JF8 Ensembl:ENSMUST00000030207 Ensembl:ENSMUST00000107215
GeneID:101739 KEGG:mmu:101739 UCSC:uc008tkw.1 UCSC:uc008tkx.1
InParanoid:A2BI10 NextBio:355092 Bgee:Q99JF8 CleanEx:MM_PSIP1
Genevestigator:Q99JF8 GermOnline:ENSMUSG00000028484 Uniprot:Q99JF8
Length = 528
Score = 140 (54.3 bits), Expect = 6.1e-06, P = 6.1e-06
Identities = 26/57 (45%), Positives = 37/57 (64%)
Query: 188 EVRGYPPWPARIEGLADET--PNRLKYHIFFYGTRETGICRQDELFPYTEFKDKYGK 242
+++GYP WPAR++ + D P K IFF+GT ET ++FPY+E K+KYGK
Sbjct: 14 KMKGYPHWPARVDEVPDGAVKPPTNKLPIFFFGTHETAFLGPKDIFPYSENKEKYGK 70
>RGD|631439 [details] [associations]
symbol:Psip1 "PC4 and SFRS1 interacting protein 1" species:10116
"Rattus norvegicus" [GO:0000395 "mRNA 5'-splice site recognition"
evidence=ISO;ISS] [GO:0001105 "RNA polymerase II transcription
coactivator activity" evidence=ISO;ISS] [GO:0003682 "chromatin
binding" evidence=ISO;ISS] [GO:0005634 "nucleus" evidence=ISO;ISS]
[GO:0005654 "nucleoplasm" evidence=ISO;ISS] [GO:0005720 "nuclear
heterochromatin" evidence=ISO;ISS;IDA] [GO:0005730 "nucleolus"
evidence=ISO;IDA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0006979 "response to oxidative
stress" evidence=ISO;ISS] [GO:0009408 "response to heat"
evidence=ISO;ISS] [GO:0033613 "activating transcription factor
binding" evidence=ISO;ISS] [GO:0034399 "nuclear periphery"
evidence=ISO;ISS] [GO:0035327 "transcriptionally active chromatin"
evidence=IDA] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=ISO;ISS] [GO:0097100
"supercoiled DNA binding" evidence=IDA] Pfam:PF00855 RGD:631439
GO:GO:0005654 GO:GO:0006979 GO:GO:0005720 GO:GO:0003682
GO:GO:0009408 GO:GO:0001105 GO:GO:0035327 GO:GO:0034399
InterPro:IPR000313 PROSITE:PS50812 SMART:SM00293 GO:GO:0097100
GO:GO:0033613 HOGENOM:HOG000230488 InterPro:IPR021567 Pfam:PF11467
eggNOG:NOG316844 GO:GO:0000395 CTD:11168 HOVERGEN:HBG108300
OrthoDB:EOG4V438N InterPro:IPR017859 PRINTS:PR01503 EMBL:AF339084
EMBL:AF372090 IPI:IPI00213638 IPI:IPI00608154 RefSeq:NP_786941.1
UniGene:Rn.93075 ProteinModelPortal:Q812D1 SMR:Q812D1 STRING:Q812D1
PhosphoSite:Q812D1 PRIDE:Q812D1 GeneID:313323 KEGG:rno:313323
UCSC:RGD:631439 InParanoid:Q812D1 NextBio:665985
ArrayExpress:Q812D1 Genevestigator:Q812D1
GermOnline:ENSRNOG00000011498 Uniprot:Q812D1
Length = 528
Score = 140 (54.3 bits), Expect = 6.1e-06, P = 6.1e-06
Identities = 26/57 (45%), Positives = 37/57 (64%)
Query: 188 EVRGYPPWPARIEGLADET--PNRLKYHIFFYGTRETGICRQDELFPYTEFKDKYGK 242
+++GYP WPAR++ + D P K IFF+GT ET ++FPY+E K+KYGK
Sbjct: 14 KMKGYPHWPARVDEVPDGAVKPPTNKLPIFFFGTHETAFLGPKDIFPYSENKEKYGK 70
>UNIPROTKB|F1SW39 [details] [associations]
symbol:SBP75 "PC4 and SFRS1-interacting protein"
species:10116 "Rattus norvegicus" [GO:0000395 "mRNA 5'-splice site
recognition" evidence=IEA] [GO:0001105 "RNA polymerase II
transcription coactivator activity" evidence=IEA] [GO:0003682
"chromatin binding" evidence=IEA] [GO:0005720 "nuclear
heterochromatin" evidence=IEA] [GO:0006979 "response to oxidative
stress" evidence=IEA] [GO:0009408 "response to heat" evidence=IEA]
[GO:0033613 "activating transcription factor binding" evidence=IEA]
[GO:0034399 "nuclear periphery" evidence=IEA] Pfam:PF00855
RGD:631439 InterPro:IPR000313 PROSITE:PS50812 SMART:SM00293
GeneTree:ENSGT00530000063013 InterPro:IPR021567 Pfam:PF11467
InterPro:IPR017859 PRINTS:PR01503 OMA:ESKDSHE IPI:IPI00213638
UniGene:Rn.93075 EMBL:CH473978 EMBL:AB285525
Ensembl:ENSRNOT00000016130 Uniprot:F1SW39
Length = 528
Score = 140 (54.3 bits), Expect = 6.1e-06, P = 6.1e-06
Identities = 26/57 (45%), Positives = 37/57 (64%)
Query: 188 EVRGYPPWPARIEGLADET--PNRLKYHIFFYGTRETGICRQDELFPYTEFKDKYGK 242
+++GYP WPAR++ + D P K IFF+GT ET ++FPY+E K+KYGK
Sbjct: 14 KMKGYPHWPARVDEVPDGAVKPPTNKLPIFFFGTHETAFLGPKDIFPYSENKEKYGK 70
>UNIPROTKB|E1BP00 [details] [associations]
symbol:PSIP1 "PC4 and SFRS1-interacting protein"
species:9913 "Bos taurus" [GO:0034399 "nuclear periphery"
evidence=IEA] [GO:0033613 "activating transcription factor binding"
evidence=IEA] [GO:0009408 "response to heat" evidence=IEA]
[GO:0006979 "response to oxidative stress" evidence=IEA]
[GO:0005720 "nuclear heterochromatin" evidence=IEA] [GO:0003682
"chromatin binding" evidence=IEA] [GO:0001105 "RNA polymerase II
transcription coactivator activity" evidence=IEA] [GO:0000395 "mRNA
5'-splice site recognition" evidence=IEA] Pfam:PF00855
InterPro:IPR000313 PROSITE:PS50812 SMART:SM00293
GeneTree:ENSGT00530000063013 InterPro:IPR021567 Pfam:PF11467
IPI:IPI00700320 OMA:ESKDSHE EMBL:DAAA02022392 EMBL:DAAA02022393
EMBL:DAAA02022394 Ensembl:ENSBTAT00000010356 Uniprot:E1BP00
Length = 530
Score = 140 (54.3 bits), Expect = 6.2e-06, P = 6.2e-06
Identities = 26/57 (45%), Positives = 37/57 (64%)
Query: 188 EVRGYPPWPARIEGLADET--PNRLKYHIFFYGTRETGICRQDELFPYTEFKDKYGK 242
+++GYP WPAR++ + D P K IFF+GT ET ++FPY+E K+KYGK
Sbjct: 14 KMKGYPHWPARVDEVPDGAVKPPTNKLPIFFFGTHETAFLGPKDIFPYSENKEKYGK 70
>UNIPROTKB|Q8MJG1 [details] [associations]
symbol:PSIP1 "PC4 and SFRS1-interacting protein"
species:9913 "Bos taurus" [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=ISS]
[GO:0005720 "nuclear heterochromatin" evidence=ISS] [GO:0033613
"activating transcription factor binding" evidence=ISS] [GO:0003682
"chromatin binding" evidence=ISS] [GO:0001105 "RNA polymerase II
transcription coactivator activity" evidence=ISS] [GO:0035327
"transcriptionally active chromatin" evidence=ISS] [GO:0097100
"supercoiled DNA binding" evidence=ISS] [GO:0000395 "mRNA 5'-splice
site recognition" evidence=ISS] [GO:0009408 "response to heat"
evidence=ISS] [GO:0006979 "response to oxidative stress"
evidence=ISS] Pfam:PF00855 GO:GO:0006979 GO:GO:0005720
GO:GO:0003682 GO:GO:0009408 GO:GO:0001105 GO:GO:0035327
InterPro:IPR000313 PROSITE:PS50812 SMART:SM00293 GO:GO:0097100
GO:GO:0033613 HOGENOM:HOG000230488 InterPro:IPR021567 Pfam:PF11467
eggNOG:NOG316844 GO:GO:0000395 EMBL:BC120106 EMBL:BC151754
EMBL:AF474175 IPI:IPI00700320 RefSeq:NP_001193405.1
UniGene:Bt.26201 ProteinModelPortal:Q8MJG1 SMR:Q8MJG1 STRING:Q8MJG1
PRIDE:Q8MJG1 GeneID:282011 KEGG:bta:282011 CTD:11168
HOVERGEN:HBG108300 InParanoid:Q8MJG1 OrthoDB:EOG4V438N
NextBio:20805878 InterPro:IPR017859 PRINTS:PR01503 Uniprot:Q8MJG1
Length = 530
Score = 140 (54.3 bits), Expect = 6.2e-06, P = 6.2e-06
Identities = 26/57 (45%), Positives = 37/57 (64%)
Query: 188 EVRGYPPWPARIEGLADET--PNRLKYHIFFYGTRETGICRQDELFPYTEFKDKYGK 242
+++GYP WPAR++ + D P K IFF+GT ET ++FPY+E K+KYGK
Sbjct: 14 KMKGYPHWPARVDEVPDGAVKPPTNKLPIFFFGTHETAFLGPKDIFPYSENKEKYGK 70
>UNIPROTKB|O75475 [details] [associations]
symbol:PSIP1 "PC4 and SFRS1-interacting protein"
species:9606 "Homo sapiens" [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0019048 "virus-host
interaction" evidence=IEA] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=IDA]
[GO:0001105 "RNA polymerase II transcription coactivator activity"
evidence=IDA] [GO:0033613 "activating transcription factor binding"
evidence=IDA] [GO:0005634 "nucleus" evidence=IDA] [GO:0005720
"nuclear heterochromatin" evidence=IDA] [GO:0005515 "protein
binding" evidence=IPI] [GO:0005654 "nucleoplasm" evidence=IDA;TAS]
[GO:0000395 "mRNA 5'-splice site recognition" evidence=IDA]
[GO:0034399 "nuclear periphery" evidence=IDA] [GO:0005730
"nucleolus" evidence=IDA] [GO:0003682 "chromatin binding"
evidence=IDA] [GO:0006979 "response to oxidative stress"
evidence=ISS] [GO:0009408 "response to heat" evidence=ISS]
[GO:0097100 "supercoiled DNA binding" evidence=ISS] [GO:0035327
"transcriptionally active chromatin" evidence=ISS] [GO:0005829
"cytosol" evidence=TAS] [GO:0016032 "viral reproduction"
evidence=TAS] Pfam:PF00855 GO:GO:0005829 Reactome:REACT_116125
GO:GO:0019048 GO:GO:0005654 GO:GO:0016032 GO:GO:0006979
GO:GO:0006355 GO:GO:0005720 GO:GO:0006351 GO:GO:0003682
GO:GO:0009408 EMBL:CH471071 GO:GO:0001105 GO:GO:0035327
GO:GO:0034399 InterPro:IPR000313 PROSITE:PS50812 SMART:SM00293
GO:GO:0097100 GO:GO:0033613 InterPro:IPR021567 Pfam:PF11467
eggNOG:NOG316844 GO:GO:0000395 PDB:3U88 PDBsum:3U88 PDB:2B4J
PDBsum:2B4J CTD:11168 HOVERGEN:HBG108300 OrthoDB:EOG4V438N
InterPro:IPR017859 PRINTS:PR01503 EMBL:AF098483 EMBL:AF098482
EMBL:AF063020 EMBL:AF199339 EMBL:AF432220 EMBL:AL359998
EMBL:AL441925 EMBL:AL513423 EMBL:BC044568 EMBL:BC064135 EMBL:U94319
IPI:IPI00028122 IPI:IPI00333317 PIR:JC7168 RefSeq:NP_001121689.1
RefSeq:NP_066967.3 RefSeq:NP_150091.2 UniGene:Hs.741408 PDB:1Z9E
PDB:3F9K PDB:3HPG PDB:3HPH PDB:4FU6 PDBsum:1Z9E PDBsum:3F9K
PDBsum:3HPG PDBsum:3HPH PDBsum:4FU6 ProteinModelPortal:O75475
SMR:O75475 DIP:DIP-46656N IntAct:O75475 STRING:O75475
Allergome:2120 PaxDb:O75475 PeptideAtlas:O75475 PRIDE:O75475
DNASU:11168 Ensembl:ENST00000380715 Ensembl:ENST00000380716
Ensembl:ENST00000380733 Ensembl:ENST00000380738
Ensembl:ENST00000397519 GeneID:11168 KEGG:hsa:11168 UCSC:uc003zlv.4
UCSC:uc003zly.3 GeneCards:GC09M015456 HGNC:HGNC:9527 HPA:CAB013718
HPA:HPA019697 MIM:603620 neXtProt:NX_O75475 PharmGKB:PA33872
InParanoid:O75475 OMA:ESKDSHE PhylomeDB:O75475 ChiTaRS:PSIP1
EvolutionaryTrace:O75475 GenomeRNAi:11168 NextBio:42491
PMAP-CutDB:O75475 ArrayExpress:O75475 Bgee:O75475 CleanEx:HS_PSIP1
Genevestigator:O75475 GermOnline:ENSG00000164985 Uniprot:O75475
Length = 530
Score = 140 (54.3 bits), Expect = 6.2e-06, P = 6.2e-06
Identities = 26/57 (45%), Positives = 37/57 (64%)
Query: 188 EVRGYPPWPARIEGLADET--PNRLKYHIFFYGTRETGICRQDELFPYTEFKDKYGK 242
+++GYP WPAR++ + D P K IFF+GT ET ++FPY+E K+KYGK
Sbjct: 14 KMKGYPHWPARVDEVPDGAVKPPTNKLPIFFFGTHETAFLGPKDIFPYSENKEKYGK 70
>UNIPROTKB|F1NYB8 [details] [associations]
symbol:HDGFRP3 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0005634 "nucleus" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] Pfam:PF00855 GO:GO:0005634 GO:GO:0005737
InterPro:IPR000313 GeneTree:ENSGT00530000063013 EMBL:AADN02041571
IPI:IPI00823274 Ensembl:ENSGALT00000038700 Uniprot:F1NYB8
Length = 126
Score = 109 (43.4 bits), Expect = 3.8e-05, P = 3.8e-05
Identities = 20/36 (55%), Positives = 24/36 (66%)
Query: 207 PNRLKYHIFFYGTRETGICRQDELFPYTEFKDKYGK 242
P KY IFF+GT ET +LFPY E+KDK+GK
Sbjct: 11 PPANKYPIFFFGTHETAFLGPKDLFPYKEYKDKFGK 46
>UNIPROTKB|F1M7V8 [details] [associations]
symbol:Hdgfrp3 "Hepatoma-derived growth factor-related
protein 3" species:10116 "Rattus norvegicus" [GO:0005634 "nucleus"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] Pfam:PF00855
RGD:628773 GO:GO:0005634 GO:GO:0005737 InterPro:IPR000313
GeneTree:ENSGT00530000063013 IPI:IPI00204130
Ensembl:ENSRNOT00000026754 ArrayExpress:F1M7V8 Uniprot:F1M7V8
Length = 174
Score = 109 (43.4 bits), Expect = 0.00098, P = 0.00098
Identities = 20/36 (55%), Positives = 24/36 (66%)
Query: 207 PNRLKYHIFFYGTRETGICRQDELFPYTEFKDKYGK 242
P KY IFF+GT ET +LFPY E+KDK+GK
Sbjct: 11 PPANKYPIFFFGTHETAFLGPKDLFPYKEYKDKFGK 46
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.318 0.135 0.401 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 948 751 0.00090 121 3 11 22 0.41 34
37 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 122
No. of states in DFA: 620 (66 KB)
Total size of DFA: 392 KB (2191 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 65.71u 0.13s 65.84t Elapsed: 00:00:06
Total cpu time: 65.74u 0.13s 65.87t Elapsed: 00:00:06
Start: Thu Aug 15 15:36:55 2013 End: Thu Aug 15 15:37:01 2013
WARNINGS ISSUED: 1