BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy6853
(154 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q6DRC3|CU059_DANRE Uncharacterized protein C21orf59 homolog OS=Danio rerio PE=2 SV=1
Length = 290
Score = 184 bits (466), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 84/149 (56%), Positives = 109/149 (73%)
Query: 6 TLSLLRGCIMIVYPMNLPTHDPIRLEFENREDLTGTQASKEVIEPSMGALWFAGKAMHRD 65
L LRG +MIVYPM LP HDPIR+E EN+EDLTGTQAS +VI LW+A K +HR
Sbjct: 142 ALDQLRGAVMIVYPMGLPPHDPIRMEIENQEDLTGTQASLQVITNEEAQLWWASKELHRG 201
Query: 66 KFVRDFLGKNEKCKAIVKISKIGSGAPSREPVMNEEEKKQLMLHYYRKQEEMKLLESDTD 125
K ++D++GKNEK K IVKI K G GAP+REPV++E+E+KQ+MLHYY++QEE+K LE D
Sbjct: 202 KKLQDYIGKNEKTKIIVKIQKRGQGAPAREPVVSEDEQKQMMLHYYKRQEELKKLEEADD 261
Query: 126 EAFRNSDWADNTSLRKNLLGLNRISWKPR 154
+ S+W+D +L++ GL I W PR
Sbjct: 262 DTHLQSEWSDRQALKRQFQGLTNIKWGPR 290
>sp|P57076|CU059_HUMAN Uncharacterized protein C21orf59 OS=Homo sapiens GN=C21orf59 PE=1
SV=1
Length = 290
Score = 182 bits (462), Expect = 6e-46, Method: Compositional matrix adjust.
Identities = 82/149 (55%), Positives = 113/149 (75%)
Query: 6 TLSLLRGCIMIVYPMNLPTHDPIRLEFENREDLTGTQASKEVIEPSMGALWFAGKAMHRD 65
L LRG +MIVYPM LP +DPIR+EFEN+EDL+GTQA VI+ + LW+A K + R
Sbjct: 142 ALDQLRGAVMIVYPMGLPPYDPIRMEFENKEDLSGTQAGLNVIKEAEAQLWWAAKELRRT 201
Query: 66 KFVRDFLGKNEKCKAIVKISKIGSGAPSREPVMNEEEKKQLMLHYYRKQEEMKLLESDTD 125
K + D++GKNEK K I KI + G GAP+REP+++ EE+KQLML+Y+R+QEE+K LE + D
Sbjct: 202 KKLSDYVGKNEKTKIIAKIQQRGQGAPAREPIISSEEQKQLMLYYHRRQEELKRLEENDD 261
Query: 126 EAFRNSDWADNTSLRKNLLGLNRISWKPR 154
+A+ NS WADNT+L+++ G+ I W+PR
Sbjct: 262 DAYLNSPWADNTALKRHFHGVKDIKWRPR 290
>sp|Q9VZH1|CU059_DROME Uncharacterized protein C21orf59 homolog OS=Drosophila melanogaster
GN=CG18675 PE=2 SV=2
Length = 291
Score = 167 bits (423), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 78/149 (52%), Positives = 104/149 (69%)
Query: 6 TLSLLRGCIMIVYPMNLPTHDPIRLEFENREDLTGTQASKEVIEPSMGALWFAGKAMHRD 65
L+LLRG + IVYPM LP HD IR+EF N EDLTGTQASKEVIEPS WFAG M
Sbjct: 142 ALNLLRGGVTIVYPMQLPPHDSIRMEFTNTEDLTGTQASKEVIEPSKAQFWFAGHQMLMG 201
Query: 66 KFVRDFLGKNEKCKAIVKISKIGSGAPSREPVMNEEEKKQLMLHYYRKQEEMKLLESDTD 125
K + D+LG N+K K +VK+++IG G P RE V+++ ++Q+M YR+QEE+K LE D D
Sbjct: 202 KLMSDYLGHNDKTKVVVKLNQIGEGPPGREAVISDPLRRQMMAEAYRRQEELKKLEQDDD 261
Query: 126 EAFRNSDWADNTSLRKNLLGLNRISWKPR 154
+ + NS WAD+ SL++ GL + ++ R
Sbjct: 262 DEYLNSSWADSGSLKRQAHGLENVRFRFR 290
>sp|Q2IH94|GATA_ANADE Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Anaeromyxobacter
dehalogenans (strain 2CP-C) GN=gatA PE=3 SV=1
Length = 492
Score = 32.7 bits (73), Expect = 0.95, Method: Composition-based stats.
Identities = 19/54 (35%), Positives = 26/54 (48%), Gaps = 12/54 (22%)
Query: 91 APSREPVMNEEEKKQLML------------HYYRKQEEMKLLESDTDEAFRNSD 132
A SRE + E K+++ML +Y R Q+ L+ D DEAFR D
Sbjct: 349 AESREQGLGAEPKRRIMLGTYALSSGYYDAYYLRAQKVRTLIRRDFDEAFRGCD 402
>sp|B4UIV1|GATA_ANASK Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Anaeromyxobacter
sp. (strain K) GN=gatA PE=3 SV=1
Length = 492
Score = 32.3 bits (72), Expect = 1.2, Method: Composition-based stats.
Identities = 19/54 (35%), Positives = 26/54 (48%), Gaps = 12/54 (22%)
Query: 91 APSREPVMNEEEKKQLML------------HYYRKQEEMKLLESDTDEAFRNSD 132
A SRE + E K+++ML +Y R Q+ L+ D DEAFR D
Sbjct: 349 AESRERGLGAEPKRRIMLGTYALSSGYYDAYYLRAQKVRTLIRRDFDEAFRGCD 402
>sp|B8JBQ1|GATA_ANAD2 Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Anaeromyxobacter
dehalogenans (strain 2CP-1 / ATCC BAA-258) GN=gatA PE=3
SV=1
Length = 492
Score = 32.3 bits (72), Expect = 1.2, Method: Composition-based stats.
Identities = 19/54 (35%), Positives = 26/54 (48%), Gaps = 12/54 (22%)
Query: 91 APSREPVMNEEEKKQLML------------HYYRKQEEMKLLESDTDEAFRNSD 132
A SRE + E K+++ML +Y R Q+ L+ D DEAFR D
Sbjct: 349 AESRERGLGAEPKRRIMLGTYALSSGYYDAYYLRAQKVRTLIRRDFDEAFRGCD 402
>sp|Q00362|2ABA_YEAST Protein phosphatase PP2A regulatory subunit B OS=Saccharomyces
cerevisiae (strain ATCC 204508 / S288c) GN=CDC55 PE=1
SV=2
Length = 526
Score = 31.6 bits (70), Expect = 1.9, Method: Composition-based stats.
Identities = 20/67 (29%), Positives = 30/67 (44%), Gaps = 6/67 (8%)
Query: 88 GSGAPSREPVMNEEEKKQLMLHYYRKQEEMKLLESDTDEAFRNSDWADNTSLRKNLLGLN 147
G GA S + + E +++L + K S + RN DW D+ +KN+L
Sbjct: 448 GEGANSED---SGTEMNEIVLQADKTAFRNKRYGSLAQRSARNKDWGDDIDFKKNIL--- 501
Query: 148 RISWKPR 154
SW PR
Sbjct: 502 HFSWHPR 508
>sp|P28237|BADH_BETVU Betaine aldehyde dehydrogenase, chloroplastic OS=Beta vulgaris PE=2
SV=1
Length = 500
Score = 30.8 bits (68), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 18/66 (27%), Positives = 30/66 (45%), Gaps = 1/66 (1%)
Query: 53 GALWFAGKAMHRDKFVRDFLGK-NEKCKAIVKISKIGSGAPSREPVMNEEEKKQLMLHYY 111
G W A HR +++R K E+ VK+ I SG P E V++ ++ ++
Sbjct: 63 GREWAATSGAHRARYLRAIAAKVTERKDHFVKLETIDSGKPFDEAVLDIDDVATCFEYFA 122
Query: 112 RKQEEM 117
+ E M
Sbjct: 123 GQAEAM 128
>sp|A2BR42|ARGC_PROMS N-acetyl-gamma-glutamyl-phosphate reductase OS=Prochlorococcus
marinus (strain AS9601) GN=argC PE=3 SV=1
Length = 351
Score = 30.4 bits (67), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 14/45 (31%), Positives = 27/45 (60%), Gaps = 3/45 (6%)
Query: 94 REPVMNEEEKKQLMLHYYRKQEEMKLLESDTDEAFRNSDWADNTS 138
R+P + ++ + L+ +YYR + +K+L DT F ++ W NT+
Sbjct: 255 RDPGLTSDDCRILLDNYYRNFKNIKVLPVDT---FPSTKWVKNTN 296
>sp|Q9JIR0|RIMB1_RAT Peripheral-type benzodiazepine receptor-associated protein 1
OS=Rattus norvegicus GN=Bzrap1 PE=1 SV=2
Length = 1847
Score = 30.4 bits (67), Expect = 4.6, Method: Composition-based stats.
Identities = 28/104 (26%), Positives = 43/104 (41%), Gaps = 3/104 (2%)
Query: 33 ENREDLTGTQASKEVIEPSMGAL--WFAGKAMHRDKFVRDFLGKNEKCKAIVKISKIGSG 90
E L+G KE +E L G RD +R G K +++ ++ +
Sbjct: 381 EENSRLSGKATEKEQVEWENAELKGQLLGVTQERDSALRKSQGLQSKLESLEQVLEHMRK 440
Query: 91 APSREPVMNEEEKKQLMLHYYRKQEEMKLLESDTDEAFRNSDWA 134
R + EEE +Q L KQEE++ L+ EA R + A
Sbjct: 441 VAQRRQQL-EEEHEQARLSLQEKQEEVRRLQQAQAEAKREHEGA 483
>sp|A3PCW5|ARGC_PROM0 N-acetyl-gamma-glutamyl-phosphate reductase OS=Prochlorococcus
marinus (strain MIT 9301) GN=argC PE=3 SV=1
Length = 351
Score = 30.4 bits (67), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 14/45 (31%), Positives = 27/45 (60%), Gaps = 3/45 (6%)
Query: 94 REPVMNEEEKKQLMLHYYRKQEEMKLLESDTDEAFRNSDWADNTS 138
R+P + ++ + L+ +YYR + +K+L DT F ++ W NT+
Sbjct: 255 RDPGLTSDDCRILLDNYYRNFKNIKVLPVDT---FPSTKWVKNTN 296
>sp|A8G4T4|ARGC_PROM2 N-acetyl-gamma-glutamyl-phosphate reductase OS=Prochlorococcus
marinus (strain MIT 9215) GN=argC PE=3 SV=1
Length = 351
Score = 30.4 bits (67), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 14/45 (31%), Positives = 27/45 (60%), Gaps = 3/45 (6%)
Query: 94 REPVMNEEEKKQLMLHYYRKQEEMKLLESDTDEAFRNSDWADNTS 138
R+P + ++ + L+ +YYR + +K+L DT F ++ W NT+
Sbjct: 255 RDPGLTSDDCRILLDNYYRNFKNIKVLPVDT---FPSTKWVKNTN 296
>sp|P42892|ECE1_HUMAN Endothelin-converting enzyme 1 OS=Homo sapiens GN=ECE1 PE=1 SV=2
Length = 770
Score = 29.3 bits (64), Expect = 9.6, Method: Compositional matrix adjust.
Identities = 14/50 (28%), Positives = 29/50 (58%), Gaps = 1/50 (2%)
Query: 81 IVKISKIGSGAPSREPVMNEEEKKQLMLHYYRKQEEM-KLLESDTDEAFR 129
++++ + G G PSR+ +N+ E ++++ Y ++ KLL +EA R
Sbjct: 252 VIQVDQSGLGLPSRDYYLNKTENEKVLTGYLNYMVQLGKLLGGGDEEAIR 301
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.318 0.134 0.409
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 58,761,843
Number of Sequences: 539616
Number of extensions: 2348617
Number of successful extensions: 6506
Number of sequences better than 100.0: 36
Number of HSP's better than 100.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 29
Number of HSP's that attempted gapping in prelim test: 6493
Number of HSP's gapped (non-prelim): 39
length of query: 154
length of database: 191,569,459
effective HSP length: 107
effective length of query: 47
effective length of database: 133,830,547
effective search space: 6290035709
effective search space used: 6290035709
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 56 (26.2 bits)