BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy6854
(148 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|P57076|CU059_HUMAN Uncharacterized protein C21orf59 OS=Homo sapiens GN=C21orf59 PE=1
SV=1
Length = 290
Score = 156 bits (395), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 78/142 (54%), Positives = 103/142 (72%), Gaps = 1/142 (0%)
Query: 1 MVILHVKHGDASQFLYETSTSTSIQQLLEEILNIYNGRLKVYRVMAEMEELAKHGTFLPP 60
MV+LHVK GD SQFL + ST +++L ++ +YNGRLKV R+ +EMEELA+HG FLPP
Sbjct: 1 MVLLHVKRGDESQFLLQAPGSTELEELTVQVARVYNGRLKVQRLCSEMEELAEHGIFLPP 60
Query: 61 DMLGLTDEQVEELKLRDDQGERCKPS-GYIENKDPIGRRNGYQPPIKMQDLIKTTIEEVK 119
+M GLTD+Q+EELKL+D+ GE+C PS G + KD IGRRNG P KM+ ++K TIEE K
Sbjct: 61 NMQGLTDDQIEELKLKDEWGEKCVPSGGAVFKKDDIGRRNGQAPNEKMKQVLKKTIEEAK 120
Query: 120 NKISKTLVERNQCLTEAVVQEG 141
ISK VE C+T +V++
Sbjct: 121 AIISKKQVEAGVCVTMEMVKDA 142
>sp|Q6DRC3|CU059_DANRE Uncharacterized protein C21orf59 homolog OS=Danio rerio PE=2 SV=1
Length = 290
Score = 147 bits (370), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 75/142 (52%), Positives = 98/142 (69%), Gaps = 1/142 (0%)
Query: 1 MVILHVKHGDASQFLYETSTSTSIQQLLEEILNIYNGRLKVYRVMAEMEELAKHGTFLPP 60
MV LHVK GD SQFL+ T+ I+ L ++I IYN RLKV R+ E+ ELA HG LPP
Sbjct: 1 MVQLHVKRGDESQFLFNTTVDVQIETLTQQICEIYNARLKVDRICTEIPELADHGISLPP 60
Query: 61 DMLGLTDEQVEELKLRDDQGERCKPSGYIE-NKDPIGRRNGYQPPIKMQDLIKTTIEEVK 119
+M GLTD+Q+ ELKL+D+ ERC PSG E KD IGRRNG+ P KM+D+++ T+EE K
Sbjct: 61 NMQGLTDDQIVELKLKDEWEERCIPSGGAEFKKDEIGRRNGHAPNEKMKDVLRRTMEEAK 120
Query: 120 NKISKTLVERNQCLTEAVVQEG 141
ISK ++ N C+T +V+E
Sbjct: 121 ALISKKQLQANVCVTMEMVKEA 142
>sp|Q9VZH1|CU059_DROME Uncharacterized protein C21orf59 homolog OS=Drosophila melanogaster
GN=CG18675 PE=2 SV=2
Length = 291
Score = 130 bits (326), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 64/142 (45%), Positives = 94/142 (66%), Gaps = 1/142 (0%)
Query: 1 MVILHVKHGDASQFLYETSTSTSIQQLLEEILNIYNGRLKVYRVMAEMEELAKHGTFLPP 60
MV+L VK GD FLYETS +L E++ ++NG+LK+ RV E+EELA+HGT +PP
Sbjct: 1 MVLLQVKRGDELIFLYETSVKEKTDTVLRELVALHNGQLKIQRVCMEIEELAEHGTMVPP 60
Query: 61 DMLGLTDEQVEELKLRDDQGERCKPS-GYIENKDPIGRRNGYQPPIKMQDLIKTTIEEVK 119
+M+GL +EQ EELKL+D ++C PS G+ NKDP+ RRNG QP MQ ++ + + K
Sbjct: 61 EMIGLNEEQREELKLKDVWADKCIPSGGFTINKDPLLRRNGQQPTEAMQKVLAGAMNDAK 120
Query: 120 NKISKTLVERNQCLTEAVVQEG 141
+ + L + ++ LT +V+E
Sbjct: 121 AMVDRRLAKSSKTLTPKIVEEA 142
>sp|Q3V4Q4|Y892_ATV Putative VWFA domain-containing protein ORF892 OS=Acidianus
two-tailed virus PE=4 SV=1
Length = 892
Score = 32.7 bits (73), Expect = 0.86, Method: Compositional matrix adjust.
Identities = 19/57 (33%), Positives = 29/57 (50%)
Query: 4 LHVKHGDASQFLYETSTSTSIQQLLEEILNIYNGRLKVYRVMAEMEELAKHGTFLPP 60
L+V G+ ++ L E T S+++LL I Y G L R E E ++HG+ P
Sbjct: 618 LNVSEGEQNKILQELVTQYSLRRLLGNIATKYKGLLDFVRNKGESEVESRHGSGKGP 674
>sp|P42675|NEUL_RABIT Neurolysin, mitochondrial OS=Oryctolagus cuniculus GN=NLN PE=1 SV=1
Length = 704
Score = 31.2 bits (69), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 19/57 (33%), Positives = 33/57 (57%), Gaps = 6/57 (10%)
Query: 81 ERCKPSG--YIENKDPIGRRNGYQPPIKMQDLIKTTIEEVKNKISKTLVERNQCLTE 135
E+ KP Y+E +GRRNG P ++Q+ IK+ +K ++S+ ++ N+ L E
Sbjct: 156 EKIKPEARRYLEKSVKMGRRNGLHLPEEVQNEIKS----MKKRMSELCIDFNKNLNE 208
>sp|O59836|HIM1_SCHPO Hsk1-interacting molecule 1 OS=Schizosaccharomyces pombe (strain
972 / ATCC 24843) GN=him1 PE=1 SV=1
Length = 545
Score = 30.4 bits (67), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 11/33 (33%), Positives = 22/33 (66%)
Query: 114 TIEEVKNKISKTLVERNQCLTEAVVQEGKGFGF 146
++E++ N++ KTL+E +QC T A ++G +
Sbjct: 220 SMEKLCNRVLKTLMENDQCTTNAPTKQGNDLSY 252
>sp|Q27778|K6PF_SCHMA 6-phosphofructokinase OS=Schistosoma mansoni GN=PFK PE=2 SV=1
Length = 781
Score = 30.0 bits (66), Expect = 4.9, Method: Composition-based stats.
Identities = 29/113 (25%), Positives = 51/113 (45%), Gaps = 12/113 (10%)
Query: 27 LLEEILNIYNGRLKVYRVMAEMEELAKHGTFLPPDML--GLTDEQVEELKLRDDQGE--- 81
+ EE I + R V + A++++ K G L DML +T E + +L ++ QG
Sbjct: 604 IFEEPFTIDDLREDVVHLRAKIDDNVKRGLVLRADMLINTITSEFIHQLYAQEGQGIFDC 663
Query: 82 RCKPSGYIENKD---PIGRRNGYQPPIK----MQDLIKTTIEEVKNKISKTLV 127
RC G+++ D P R G + K + + I I ++ I +T +
Sbjct: 664 RCNVLGHMQQGDRPSPFDRSLGTKFASKAIDWLDEQINANIVQILQSIHQTFM 716
>sp|A4IST9|SECA1_GEOTN Protein translocase subunit SecA 1 OS=Geobacillus
thermodenitrificans (strain NG80-2) GN=secA1 PE=3 SV=2
Length = 837
Score = 30.0 bits (66), Expect = 5.7, Method: Compositional matrix adjust.
Identities = 18/43 (41%), Positives = 25/43 (58%), Gaps = 4/43 (9%)
Query: 43 RVMAEMEELAKHGTFLPPDMLGLTDEQV----EELKLRDDQGE 81
R +A +E++A L P+M L+DEQ+ EE K R QGE
Sbjct: 14 RQLARLEKIADQVDALGPEMARLSDEQLRQKTEEFKARYQQGE 56
>sp|Q5KV94|SECA1_GEOKA Protein translocase subunit SecA 1 OS=Geobacillus kaustophilus
(strain HTA426) GN=secA1 PE=3 SV=1
Length = 837
Score = 30.0 bits (66), Expect = 5.9, Method: Compositional matrix adjust.
Identities = 18/43 (41%), Positives = 25/43 (58%), Gaps = 4/43 (9%)
Query: 43 RVMAEMEELAKHGTFLPPDMLGLTDEQV----EELKLRDDQGE 81
R +A +E++A L P+M L+DEQ+ EE K R QGE
Sbjct: 14 RQLARLEKIADQVDALGPEMARLSDEQLRQKTEEFKARYQQGE 56
>sp|P11215|ITAM_HUMAN Integrin alpha-M OS=Homo sapiens GN=ITGAM PE=1 SV=2
Length = 1152
Score = 29.6 bits (65), Expect = 6.6, Method: Compositional matrix adjust.
Identities = 18/57 (31%), Positives = 31/57 (54%), Gaps = 6/57 (10%)
Query: 12 SQFLYETSTSTSIQQLLEEILNIYNG-RLKVYRVMAEMEELAKHGTFLPPDMLGLTD 67
+Q L T T+T I++++ E+ NI NG R ++++ + + K G D LG D
Sbjct: 219 TQLLGRTHTATGIRKVVRELFNITNGARKNAFKILVVITDGEKFG-----DPLGYED 270
>sp|A2VDQ5|NEUL_BOVIN Neurolysin, mitochondrial OS=Bos taurus GN=NLN PE=2 SV=1
Length = 704
Score = 29.6 bits (65), Expect = 7.0, Method: Compositional matrix adjust.
Identities = 18/57 (31%), Positives = 32/57 (56%), Gaps = 6/57 (10%)
Query: 81 ERCKPSG--YIENKDPIGRRNGYQPPIKMQDLIKTTIEEVKNKISKTLVERNQCLTE 135
E+ KP Y+E +G+RNG P ++Q+ IK +K ++S+ ++ N+ L E
Sbjct: 156 EKIKPEARRYLEKSVKMGKRNGLHLPEQVQNEIKA----MKKRMSELCIDFNKNLNE 208
>sp|Q91YP2|NEUL_MOUSE Neurolysin, mitochondrial OS=Mus musculus GN=Nln PE=2 SV=1
Length = 704
Score = 29.3 bits (64), Expect = 8.2, Method: Compositional matrix adjust.
Identities = 17/57 (29%), Positives = 31/57 (54%), Gaps = 6/57 (10%)
Query: 81 ERCKPSG--YIENKDPIGRRNGYQPPIKMQDLIKTTIEEVKNKISKTLVERNQCLTE 135
E+ KP Y+E +G+RNG P + +K I+ +K ++S+ ++ N+ L E
Sbjct: 156 EKIKPEARRYLEKSIKMGKRNGLHLP----EHVKNEIKSMKKRMSELCIDFNKNLNE 208
>sp|Q6C443|OXR1_YARLI Oxidation resistance protein 1 OS=Yarrowia lipolytica (strain
CLIB 122 / E 150) GN=OXR1 PE=3 SV=1
Length = 229
Score = 29.3 bits (64), Expect = 9.1, Method: Compositional matrix adjust.
Identities = 18/45 (40%), Positives = 24/45 (53%), Gaps = 2/45 (4%)
Query: 16 YETSTSTSI--QQLLEEILNIYNGRLKVYRVMAEMEELAKHGTFL 58
Y ST T I +L +EI N+ R+K+YR L +HGT L
Sbjct: 52 YSHSTRTKIMTTELADEIRNLVPERIKLYRSWQLQYSLEQHGTSL 96
>sp|O32198|LIAS_BACSU Sensor histidine kinase LiaS OS=Bacillus subtilis (strain 168)
GN=liaS PE=2 SV=1
Length = 360
Score = 29.3 bits (64), Expect = 9.5, Method: Compositional matrix adjust.
Identities = 23/74 (31%), Positives = 31/74 (41%), Gaps = 18/74 (24%)
Query: 6 VKHGDASQFLYETSTSTSIQQLLEEILNIYNGRLKVYRVMAEMEELAKHGTFLPP---DM 62
V G AS ++Y T I L+E IL NG YR+ PP D
Sbjct: 62 VTVGFASGYMYGNRLKTRIDTLIESILTFENGNF-AYRI--------------PPLGDDE 106
Query: 63 LGLTDEQVEELKLR 76
+GL +Q+ E+ R
Sbjct: 107 IGLAADQLNEMAKR 120
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.315 0.136 0.383
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 56,620,219
Number of Sequences: 539616
Number of extensions: 2264877
Number of successful extensions: 6113
Number of sequences better than 100.0: 40
Number of HSP's better than 100.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 30
Number of HSP's that attempted gapping in prelim test: 6099
Number of HSP's gapped (non-prelim): 40
length of query: 148
length of database: 191,569,459
effective HSP length: 106
effective length of query: 42
effective length of database: 134,370,163
effective search space: 5643546846
effective search space used: 5643546846
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (22.0 bits)
S2: 55 (25.8 bits)