Query psy6854
Match_columns 148
No_of_seqs 85 out of 87
Neff 4.5
Searched_HMMs 13730
Date Fri Aug 16 20:07:19 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy6854.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/6854hhsearch_scop -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d1v5ta_ d.15.1.1 (A:) 8430435i 78.1 0.82 5.9E-05 29.4 3.1 36 1-36 7-42 (90)
2 d1wgga_ d.15.1.1 (A:) Ubiquiti 68.3 2.8 0.0002 27.2 3.9 35 2-36 8-42 (96)
3 d1m94a_ d.15.1.1 (A:) Ubiquiti 65.3 6.1 0.00044 24.1 5.0 34 1-34 1-34 (73)
4 d1wiaa_ d.15.1.1 (A:) Ubiquiti 65.0 4.3 0.00032 26.5 4.4 30 2-31 8-37 (95)
5 d2bwfa1 d.15.1.1 (A:2-74) DSK2 59.2 6.8 0.00049 23.7 4.3 31 2-33 2-32 (73)
6 d1yqba1 d.15.1.1 (A:15-98) Ubi 59.1 6.4 0.00047 24.5 4.3 34 1-35 7-40 (84)
7 d1v2ya_ d.15.1.1 (A:) Ubiquiti 56.9 11 0.00077 24.7 5.3 39 2-40 8-46 (105)
8 d1wx9a1 d.15.1.1 (A:8-80) Larg 56.6 11 0.00081 22.7 5.0 31 3-33 2-32 (73)
9 d1lghb_ f.3.1.1 (B:) Light-har 56.4 2.6 0.00019 24.8 1.7 15 61-75 2-16 (43)
10 d1z2ma2 d.15.1.1 (A:79-154) In 50.9 18 0.0013 21.6 5.3 33 1-33 3-35 (76)
11 d1j8ca_ d.15.1.1 (A:) Ubiquiti 49.3 15 0.0011 23.5 5.0 35 1-36 32-66 (103)
12 d1oqya4 d.15.1.1 (A:1-77) Ubiq 47.1 11 0.00081 22.8 3.9 32 2-33 3-34 (77)
13 d1bt0a_ d.15.1.1 (A:) Rub1 {Mo 42.3 22 0.0016 21.0 4.7 31 3-33 2-32 (73)
14 d1ogwa_ d.15.1.1 (A:) Ubiquiti 42.2 22 0.0016 21.2 4.7 31 3-33 2-32 (76)
15 d1a9xa1 a.92.1.1 (A:403-555) C 41.5 50 0.0036 22.8 7.2 79 23-147 18-96 (153)
16 d1wgda_ d.15.1.1 (A:) Homocyst 39.8 22 0.0016 22.5 4.6 34 2-35 8-43 (93)
17 d1wh3a_ d.15.1.1 (A:) 2'-5'-ol 34.8 35 0.0026 20.8 4.9 31 2-32 8-38 (87)
18 d1uh6a_ d.15.1.1 (A:) Ubiquiti 33.4 28 0.0021 22.5 4.4 36 1-36 28-63 (100)
19 d1st6a3 a.24.9.1 (A:253-371) V 33.3 49 0.0036 22.5 5.8 16 38-53 66-81 (119)
20 d2zeqa1 d.15.1.1 (A:1-78) Ubiq 33.1 39 0.0029 20.3 4.9 31 3-33 4-34 (78)
21 d1jo5a_ f.3.1.1 (A:) Light-har 32.9 4.7 0.00034 24.1 0.2 14 62-75 8-21 (48)
22 d1euvb_ d.15.1.1 (B:) SUMO-1 ( 32.0 31 0.0022 20.8 4.2 32 4-35 5-37 (79)
23 d1wx8a1 d.15.1.1 (A:8-90) 4931 31.4 31 0.0022 21.0 4.1 35 1-36 10-44 (83)
24 d1v86a_ d.15.1.1 (A:) hypothet 30.6 42 0.0031 21.0 4.9 36 1-37 17-52 (95)
25 d1z2ma1 d.15.1.1 (A:3-78) Inte 30.4 40 0.0029 20.1 4.5 30 3-32 2-31 (76)
26 d2csba4 a.60.2.4 (A:465-519) T 30.2 11 0.00078 22.6 1.5 36 28-74 17-52 (55)
27 d2uyzb1 d.15.1.1 (B:20-96) SUM 28.2 48 0.0035 19.7 4.6 33 2-34 3-35 (77)
28 d1lvaa4 a.4.5.35 (A:575-634) C 28.0 41 0.003 20.2 4.1 31 113-145 1-31 (60)
29 d1ttna1 d.15.1.1 (A:21-100) De 27.3 43 0.0031 20.1 4.3 32 2-33 4-35 (80)
30 d1jl0a_ d.156.1.1 (A:) S-adeno 25.4 31 0.0023 27.2 4.0 34 3-36 237-272 (325)
31 d2cmda2 d.162.1.1 (A:146-312) 24.8 22 0.0016 23.9 2.6 33 92-124 127-160 (167)
32 d2nlza1 d.153.1.6 (A:3-539) Ce 23.3 13 0.00093 30.5 1.3 111 28-140 121-244 (537)
33 d1f1fa_ a.3.1.1 (A:) Cytochrom 23.3 41 0.003 19.6 3.5 27 48-74 50-77 (88)
34 d2cxfa1 a.256.1.1 (A:83-249) R 23.2 21 0.0015 24.6 2.3 39 21-59 13-55 (167)
35 d1e29a_ a.3.1.1 (A:) Photosyst 23.0 22 0.0016 22.9 2.3 27 56-82 98-132 (135)
36 d1st6a4 a.24.9.1 (A:372-488) V 22.9 1E+02 0.0076 20.7 7.5 24 30-53 46-72 (117)
37 d1uela_ d.15.1.1 (A:) Ubiquiti 22.7 65 0.0047 19.7 4.6 31 3-33 2-32 (95)
38 d1ansa_ g.11.1.1 (A:) Neurotox 22.1 16 0.0012 18.9 1.1 10 78-87 12-21 (27)
39 d1wjua_ d.15.1.1 (A:) NEDD8 ul 21.9 33 0.0024 21.9 3.0 30 7-36 25-54 (100)
40 d2i3oa1 d.153.1.6 (A:1-516) Hy 20.3 17 0.0012 29.5 1.4 97 37-140 124-230 (516)
41 d1v6ea_ d.15.1.1 (A:) Ubiquiti 20.3 74 0.0054 19.9 4.5 33 1-34 7-41 (95)
42 d1q9ua_ d.129.7.1 (A:) Unnamed 20.2 30 0.0022 22.3 2.5 58 12-69 1-61 (128)
No 1
>d1v5ta_ d.15.1.1 (A:) 8430435i17rik protein {Mouse (Mus musculus) [TaxId: 10090]}
Probab=78.13 E-value=0.82 Score=29.40 Aligned_cols=36 Identities=14% Similarity=0.109 Sum_probs=29.4
Q ss_pred CeEEEeeccCCceeeeeecCcccHHHHHHHHHHHhh
Q psy6854 1 MVILHVKHGDASQFLYETSTSTSIQQLLEEILNIYN 36 (148)
Q Consensus 1 MVllHVK~gde~qFLyEtt~~~~ve~li~~lv~I~N 36 (148)
++.|+||.+.+..++++.+-+..|.+|.+.|....|
T Consensus 7 ~~~i~Vk~~~~~~~i~~v~~~~tV~~LK~~i~~~t~ 42 (90)
T d1v5ta_ 7 GLPIIVKWGGQEYSVTTLSEDDTVLDLKQFLKTLTG 42 (90)
T ss_dssp SCCEEEEETTEEEEECSCCSSSBHHHHHHHHHHHTC
T ss_pred cEEEEEEECCeEEEEEEeCCCCcHHHHHHHHHHHHc
Confidence 467999988888888999999999999986655443
No 2
>d1wgga_ d.15.1.1 (A:) Ubiquitin carboxyl-terminal hydrolase 14 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=68.25 E-value=2.8 Score=27.22 Aligned_cols=35 Identities=14% Similarity=0.082 Sum_probs=29.4
Q ss_pred eEEEeeccCCceeeeeecCcccHHHHHHHHHHHhh
Q psy6854 2 VILHVKHGDASQFLYETSTSTSIQQLLEEILNIYN 36 (148)
Q Consensus 2 VllHVK~gde~qFLyEtt~~~~ve~li~~lv~I~N 36 (148)
..|+||.+.+..|-++...+..|.+|.+.|....+
T Consensus 8 ~~I~VK~~~~~~~~v~v~~~~tV~~lK~~i~~~~g 42 (96)
T d1wgga_ 8 YSVTVKWGKEKFEGVELNTDEPPMVFKAQLFALTG 42 (96)
T ss_dssp EEEEEEETTEEEEEEEEESSSCHHHHHHHHHHHTC
T ss_pred eEEEEEeCCCCEEEEEECCCCcHHHHHHHhhhhcC
Confidence 57999998877788999999999999987766544
No 3
>d1m94a_ d.15.1.1 (A:) Ubiquitin-like modifier protein hub1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=65.33 E-value=6.1 Score=24.05 Aligned_cols=34 Identities=9% Similarity=0.028 Sum_probs=29.5
Q ss_pred CeEEEeeccCCceeeeeecCcccHHHHHHHHHHH
Q psy6854 1 MVILHVKHGDASQFLYETSTSTSIQQLLEEILNI 34 (148)
Q Consensus 1 MVllHVK~gde~qFLyEtt~~~~ve~li~~lv~I 34 (148)
|+.++||.-....|-++..-+..|.+|.+.+...
T Consensus 1 mi~i~vk~~~Gk~~~v~V~~~~tV~~lK~~I~~~ 34 (73)
T d1m94a_ 1 MIEVVVNDRLGKKVRVKCLAEDSVGDFKKVLSLQ 34 (73)
T ss_dssp CEEEEEEETTTEEEEEEECTTSBHHHHHHHHHHH
T ss_pred CeEEEEECCCCCEEEEEECCcCcHHHHHHHHHHh
Confidence 8999999776678999999999999999876654
No 4
>d1wiaa_ d.15.1.1 (A:) Ubiquitin-like protein bab25500 (2010008E23Rik) {Mouse (Mus musculus) [TaxId: 10090]}
Probab=65.05 E-value=4.3 Score=26.46 Aligned_cols=30 Identities=10% Similarity=0.127 Sum_probs=26.7
Q ss_pred eEEEeeccCCceeeeeecCcccHHHHHHHH
Q psy6854 2 VILHVKHGDASQFLYETSTSTSIQQLLEEI 31 (148)
Q Consensus 2 VllHVK~gde~qFLyEtt~~~~ve~li~~l 31 (148)
+.|+||.-+...|.++..-+..|.+|.+.+
T Consensus 8 m~i~vK~l~~~~~~v~v~~~~TV~~lK~~i 37 (95)
T d1wiaa_ 8 INVRLKFLNDTEELAVARPEDTVGTLKSKY 37 (95)
T ss_dssp EEEEEEETTTEEEEEEECSSSBHHHHHHHH
T ss_pred EEEEEEcCCCCEEEEEECCcCcHHHHHHHH
Confidence 468999999999999999999999998643
No 5
>d2bwfa1 d.15.1.1 (A:2-74) DSK2 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=59.23 E-value=6.8 Score=23.71 Aligned_cols=31 Identities=19% Similarity=0.400 Sum_probs=25.1
Q ss_pred eEEEeeccCCceeeeeecCcccHHHHHHHHHH
Q psy6854 2 VILHVKHGDASQFLYETSTSTSIQQLLEEILN 33 (148)
Q Consensus 2 VllHVK~gde~qFLyEtt~~~~ve~li~~lv~ 33 (148)
+.|+||.+++ .|-++..-+..|.+|.+.+-.
T Consensus 2 i~I~Vk~~~~-~~~i~v~~~~tV~~lK~~I~~ 32 (73)
T d2bwfa1 2 LNIHIKSGQD-KWEVNVAPESTVLQFKEAINK 32 (73)
T ss_dssp EEEEEEETTE-EEEEEECTTCBHHHHHHHHHH
T ss_pred EEEEEEeCCe-EEEEEECCCChHHHHHHHHHH
Confidence 4689998764 589999999999999886553
No 6
>d1yqba1 d.15.1.1 (A:15-98) Ubiquilin-3 {Human (Homo sapiens) [TaxId: 9606]}
Probab=59.06 E-value=6.4 Score=24.52 Aligned_cols=34 Identities=26% Similarity=0.363 Sum_probs=27.3
Q ss_pred CeEEEeeccCCceeeeeecCcccHHHHHHHHHHHh
Q psy6854 1 MVILHVKHGDASQFLYETSTSTSIQQLLEEILNIY 35 (148)
Q Consensus 1 MVllHVK~gde~qFLyEtt~~~~ve~li~~lv~I~ 35 (148)
|+.|.||..+. .|-++..-+..|.+|...|.+..
T Consensus 7 ~i~I~Vkt~~~-~~~~~V~~~~tV~~lK~~i~~~~ 40 (84)
T d1yqba1 7 LIKVTVKTPKD-KEDFSVTDTCTIQQLKEEISQRF 40 (84)
T ss_dssp EEEEEEECSSC-EEEEEEETTCBHHHHHHHHHHHH
T ss_pred EEEEEEEcCCC-cEEEEECCCCcHHHHHHHHHHHH
Confidence 57899997754 58899999999999988766543
No 7
>d1v2ya_ d.15.1.1 (A:) Ubiquitin-like protein 3300001g02rik {Mouse (Mus musculus) [TaxId: 10090]}
Probab=56.94 E-value=11 Score=24.69 Aligned_cols=39 Identities=10% Similarity=0.073 Sum_probs=32.6
Q ss_pred eEEEeeccCCceeeeeecCcccHHHHHHHHHHHhhhHHH
Q psy6854 2 VILHVKHGDASQFLYETSTSTSIQQLLEEILNIYNGRLK 40 (148)
Q Consensus 2 VllHVK~gde~qFLyEtt~~~~ve~li~~lv~I~N~RlK 40 (148)
..|.||.-+...|-++..-+..|.+|...|.+..+--..
T Consensus 8 M~v~Vk~~~G~~~~v~V~~~~TV~~LK~~I~~~~~ip~~ 46 (105)
T d1v2ya_ 8 MTVRVCKMDGEVMPVVVVQNATVLDLKKAIQRYVQLKQE 46 (105)
T ss_dssp EEEEEECSSSCEEEEEECTTCBHHHHHHHHHHHHHHHHH
T ss_pred EEEEEEeCCCCEEEEEECCCChHHHHHHHHHHHHCcCHH
Confidence 468999999999999999999999999988776554433
No 8
>d1wx9a1 d.15.1.1 (A:8-80) Large proline-rich protein BAT3 {Human (Homo sapiens) [TaxId: 9606]}
Probab=56.58 E-value=11 Score=22.69 Aligned_cols=31 Identities=16% Similarity=0.187 Sum_probs=26.6
Q ss_pred EEEeeccCCceeeeeecCcccHHHHHHHHHH
Q psy6854 3 ILHVKHGDASQFLYETSTSTSIQQLLEEILN 33 (148)
Q Consensus 3 llHVK~gde~qFLyEtt~~~~ve~li~~lv~ 33 (148)
.|+||.-+...|-++...+..|++|...|..
T Consensus 2 ~I~Vk~~~g~~~~l~V~~~~tV~~lK~~I~~ 32 (73)
T d1wx9a1 2 EVLVKTLDSQTRTFIVGAQMNVKEFKEHIAA 32 (73)
T ss_dssp EEEEECTTSCEEEEEECTTSBHHHHHHHHHH
T ss_pred EEEEEcCCCCEEEEEECCCChHHHHHHHHHH
Confidence 5889987788999999999999999986543
No 9
>d1lghb_ f.3.1.1 (B:) Light-harvesting complex subunits {Rhodospirillum molischianum [TaxId: 1083]}
Probab=56.36 E-value=2.6 Score=24.76 Aligned_cols=15 Identities=27% Similarity=0.403 Sum_probs=12.7
Q ss_pred ccCCCCHHHHHHhhc
Q psy6854 61 DMLGLTDEQVEELKL 75 (148)
Q Consensus 61 e~qGLtdeq~~el~l 75 (148)
-|-||||+|.+|++-
T Consensus 2 S~sGLT~~EA~EfH~ 16 (43)
T d1lghb_ 2 SLSGLTEEEAIAVHD 16 (43)
T ss_dssp CSSSCCHHHHHHHHH
T ss_pred CCCcCCHHHHHHHHH
Confidence 378999999999873
No 10
>d1z2ma2 d.15.1.1 (A:79-154) Interferon-induced 15 kDa protein {Human (Homo sapiens) [TaxId: 9606]}
Probab=50.90 E-value=18 Score=21.63 Aligned_cols=33 Identities=12% Similarity=0.272 Sum_probs=27.5
Q ss_pred CeEEEeeccCCceeeeeecCcccHHHHHHHHHH
Q psy6854 1 MVILHVKHGDASQFLYETSTSTSIQQLLEEILN 33 (148)
Q Consensus 1 MVllHVK~gde~qFLyEtt~~~~ve~li~~lv~ 33 (148)
++.|.||.-+...|-|+...+..|.+|.+.+..
T Consensus 3 ~~qi~Vk~~~G~~~~l~v~~~~tV~~lK~~I~~ 35 (76)
T d1z2ma2 3 PLSILVRNNKGRSSTYEVRLTQTVAHLKQQVSG 35 (76)
T ss_dssp CEEEEEECTTSCEEEEEECTTSBHHHHHHHHHH
T ss_pred CEEEEEEcCCCCEEEEEECCCCcHHHHHHHHHH
Confidence 467889977777899999999999999886553
No 11
>d1j8ca_ d.15.1.1 (A:) Ubiquitin-like N-terminal domain of PLIC-2 {Human (Homo sapiens) [TaxId: 9606]}
Probab=49.27 E-value=15 Score=23.50 Aligned_cols=35 Identities=20% Similarity=0.318 Sum_probs=27.7
Q ss_pred CeEEEeeccCCceeeeeecCcccHHHHHHHHHHHhh
Q psy6854 1 MVILHVKHGDASQFLYETSTSTSIQQLLEEILNIYN 36 (148)
Q Consensus 1 MVllHVK~gde~qFLyEtt~~~~ve~li~~lv~I~N 36 (148)
|+.|+||.... .|-|+..-+..|.+|...|....+
T Consensus 32 ~i~V~Vk~~~~-~~~i~V~~~~tV~~LK~~I~~~~g 66 (103)
T d1j8ca_ 32 IIKVTVKTPKE-KEEFAVPENSSVQQFKEAISKRFK 66 (103)
T ss_dssp CEEEEEECSSC-EEEEEECTTCCHHHHHHHHHHHHC
T ss_pred eEEEEEECCCc-cEEEEECCCChHHHHHHHHHHHHC
Confidence 46789997654 578899999999999987766543
No 12
>d1oqya4 d.15.1.1 (A:1-77) Ubiquitin-like domain of Rad23 homolog A (Hhr23a) {Human (Homo sapiens) [TaxId: 9606]}
Probab=47.14 E-value=11 Score=22.81 Aligned_cols=32 Identities=19% Similarity=0.245 Sum_probs=27.7
Q ss_pred eEEEeeccCCceeeeeecCcccHHHHHHHHHH
Q psy6854 2 VILHVKHGDASQFLYETSTSTSIQQLLEEILN 33 (148)
Q Consensus 2 VllHVK~gde~qFLyEtt~~~~ve~li~~lv~ 33 (148)
+.|.||.-+...|-+|..-+..|.+|...|..
T Consensus 3 ~~i~vk~l~g~~~~l~v~~~~TV~~lK~~i~~ 34 (77)
T d1oqya4 3 VTITLKTLQQQTFKIRMEPDETVKVLKEKIEA 34 (77)
T ss_dssp CCEEEEETTTEEEEECCCTTCBHHHHHHHHHH
T ss_pred EEEEEECCCCCEEEEEECCCCcHHHHHHHHHH
Confidence 56889988899999999999999999886544
No 13
>d1bt0a_ d.15.1.1 (A:) Rub1 {Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]}
Probab=42.28 E-value=22 Score=21.01 Aligned_cols=31 Identities=13% Similarity=0.277 Sum_probs=26.0
Q ss_pred EEEeeccCCceeeeeecCcccHHHHHHHHHH
Q psy6854 3 ILHVKHGDASQFLYETSTSTSIQQLLEEILN 33 (148)
Q Consensus 3 llHVK~gde~qFLyEtt~~~~ve~li~~lv~ 33 (148)
.|.||.-+...|-++..-+..|.+|...+.+
T Consensus 2 ~I~Vk~~~G~~~~l~V~~~~tV~~lK~~i~~ 32 (73)
T d1bt0a_ 2 LIKVKTLTGKEIEIDIEPTDTIDRIKERVEE 32 (73)
T ss_dssp EEEEECTTSCEEEEECCTTCBHHHHHHHHHH
T ss_pred EEEEEeCCCCEEEEEECCCCcHHHHHHHHHH
Confidence 5789977778899999999999999876544
No 14
>d1ogwa_ d.15.1.1 (A:) Ubiquitin {Human (Homo sapiens) [TaxId: 9606]}
Probab=42.22 E-value=22 Score=21.21 Aligned_cols=31 Identities=19% Similarity=0.244 Sum_probs=26.3
Q ss_pred EEEeeccCCceeeeeecCcccHHHHHHHHHH
Q psy6854 3 ILHVKHGDASQFLYETSTSTSIQQLLEEILN 33 (148)
Q Consensus 3 llHVK~gde~qFLyEtt~~~~ve~li~~lv~ 33 (148)
.|.||.-+...|-++...+..|.+|...+..
T Consensus 2 qI~Vk~l~G~~~~l~v~~~~tV~~lK~~I~~ 32 (76)
T d1ogwa_ 2 QIFVKTLTGKTITLEVEPSDTIENVKAKIQD 32 (76)
T ss_dssp EEEEEETTSCEEEEECCTTSBHHHHHHHHHH
T ss_pred EEEEEcCCCCEEEEEECCCCcHHHHHHhhhh
Confidence 4788977888999999999999999886544
No 15
>d1a9xa1 a.92.1.1 (A:403-555) Carbamoyl phosphate synthetase, large subunit connection domain {Escherichia coli [TaxId: 562]}
Probab=41.53 E-value=50 Score=22.81 Aligned_cols=79 Identities=15% Similarity=0.171 Sum_probs=49.7
Q ss_pred cHHHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCccCCCCHHHHHHhhcccccCCcCCCCCCccCCCCCCCCCCCC
Q psy6854 23 SIQQLLEEILNIYNGRLKVYRVMAEMEELAKHGTFLPPDMLGLTDEQVEELKLRDDQGERCKPSGYIENKDPIGRRNGYQ 102 (148)
Q Consensus 23 ~ve~li~~lv~I~N~RlKi~rL~~e~eeLa~hG~~~Ppe~qGLtdeq~~el~l~d~w~~~c~p~G~~~~kD~~grR~G~a 102 (148)
+.++|.+.|..=.-.| |-.|..+++ +|.|-++|-++...|.|
T Consensus 18 ~~~~l~~~L~~Pt~~R--i~~i~eAlr-------------~G~sveeI~elTkID~W----------------------- 59 (153)
T d1a9xa1 18 ALTKIRRELKDAGADR--IWYIADAFR-------------AGLSVDGVFNLTNIDRW----------------------- 59 (153)
T ss_dssp HHHHHHHHHHTCBTTH--HHHHHHHHH-------------TTBCHHHHHHHHCCCHH-----------------------
T ss_pred HHHHHHHHHccCCchH--HHHHHHHHH-------------cCCCHHHHHHhhCeeeH-----------------------
Confidence 4456666555444444 456777766 49999999999999988
Q ss_pred CChHHHHHHHHHHHHHHHhhhHHhhhhccccCHHHHHhhhcCCCC
Q psy6854 103 PPIKMQDLIKTTIEEVKNKISKTLVERNQCLTEAVVQEGKGFGFD 147 (148)
Q Consensus 103 p~~~~~~vL~~t~~eAk~~isK~qv~~~~~lT~~~l~E~Ld~~~~ 147 (148)
--..|.+-++-.+.+.+. ....++.+.++++-..||.
T Consensus 60 ----FL~qi~~Iv~~E~~l~~~----~~~~l~~~~l~~aK~~GFS 96 (153)
T d1a9xa1 60 ----FLVQIEELVRLEEKVAEV----GITGLNADFLRQLKRKGFA 96 (153)
T ss_dssp ----HHHHHHHHHHHHHHHHHH----TGGGCCHHHHHHHHHTTCC
T ss_pred ----HHHHHHHHHHHHhhhhhc----CcccCCHHHHHHHHHcCCC
Confidence 223344443333332111 1134888899999999984
No 16
>d1wgda_ d.15.1.1 (A:) Homocysteine-responsive endoplasmic reticulum-resident ubiquitin-like domain member 1 protein, HERPUD1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=39.85 E-value=22 Score=22.53 Aligned_cols=34 Identities=21% Similarity=0.266 Sum_probs=26.3
Q ss_pred eEEEeeccC--CceeeeeecCcccHHHHHHHHHHHh
Q psy6854 2 VILHVKHGD--ASQFLYETSTSTSIQQLLEEILNIY 35 (148)
Q Consensus 2 VllHVK~gd--e~qFLyEtt~~~~ve~li~~lv~I~ 35 (148)
|.|+||.-+ ...|-+++.-+..|.+|.+.|.+.+
T Consensus 8 i~l~Ik~~~~~~~~~~~~v~~~~TV~~LK~~I~~~~ 43 (93)
T d1wgda_ 8 VTLLVKSPNQRHRDLELSGDRGWSVGHLKAHLSRVY 43 (93)
T ss_dssp CEEEEECSSSSCCCEEEECCTTSCHHHHHHHHHHHS
T ss_pred EEEEEECCCCCceeEEEEcCCCCcHHHHHHHHHHHc
Confidence 578999543 3459999999999999998775543
No 17
>d1wh3a_ d.15.1.1 (A:) 2'-5'-oligoadenylate synthetase-like protein, OASL {Human (Homo sapiens) [TaxId: 9606]}
Probab=34.84 E-value=35 Score=20.85 Aligned_cols=31 Identities=23% Similarity=0.372 Sum_probs=26.3
Q ss_pred eEEEeeccCCceeeeeecCcccHHHHHHHHH
Q psy6854 2 VILHVKHGDASQFLYETSTSTSIQQLLEEIL 32 (148)
Q Consensus 2 VllHVK~gde~qFLyEtt~~~~ve~li~~lv 32 (148)
+.|.||--+...|-++..-+..|.+|...|.
T Consensus 8 mqI~Vk~~~g~~~~l~v~~~~tV~~lK~~I~ 38 (87)
T d1wh3a_ 8 IQVFVKNPDGGSYAYAINPNSFILGLKQQIE 38 (87)
T ss_dssp EEEEEEETTTEEEEEEECSSSBHHHHHHHHH
T ss_pred EEEEEECCCCCEEEEEECCcCcHHHHHHHHH
Confidence 5688997777889999999999999988654
No 18
>d1uh6a_ d.15.1.1 (A:) Ubiquitin-like protein 5, ubl5 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=33.36 E-value=28 Score=22.49 Aligned_cols=36 Identities=14% Similarity=0.086 Sum_probs=28.9
Q ss_pred CeEEEeeccCCceeeeeecCcccHHHHHHHHHHHhh
Q psy6854 1 MVILHVKHGDASQFLYETSTSTSIQQLLEEILNIYN 36 (148)
Q Consensus 1 MVllHVK~gde~qFLyEtt~~~~ve~li~~lv~I~N 36 (148)
|+.|.||-..-..|=+++.-+..|.+|.+.|....+
T Consensus 28 ~i~V~V~~~~Gk~~~v~V~p~~TV~~LK~~I~~~~g 63 (100)
T d1uh6a_ 28 MIEVVCNDRLGKKVRVKCNTDDTIGDLKKLIAAQTG 63 (100)
T ss_dssp EEEEEEECSSSSCEEEEEETTSBHHHHHHHHHHHHC
T ss_pred eEEEEEECCCCCEEEEEECCcChHHHHHHHHHHHHC
Confidence 567888865567799999999999999998766443
No 19
>d1st6a3 a.24.9.1 (A:253-371) Vinculin {Chicken (Gallus gallus) [TaxId: 9031]}
Probab=33.28 E-value=49 Score=22.50 Aligned_cols=16 Identities=6% Similarity=0.252 Sum_probs=13.1
Q ss_pred HHHHHHHHHHHHHHHh
Q psy6854 38 RLKVYRVMAEMEELAK 53 (148)
Q Consensus 38 RlKi~rL~~e~eeLa~ 53 (148)
|-.|.++|+|++.|+.
T Consensus 66 r~~Il~~c~ei~~lt~ 81 (119)
T d1st6a3 66 RREILGTCKTLGQMTD 81 (119)
T ss_dssp HHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHH
Confidence 6788999999988854
No 20
>d2zeqa1 d.15.1.1 (A:1-78) Ubiquitin-like domain of parkin {Mouse (Mus musculus) [TaxId: 10090]}
Probab=33.07 E-value=39 Score=20.34 Aligned_cols=31 Identities=32% Similarity=0.395 Sum_probs=26.5
Q ss_pred EEEeeccCCceeeeeecCcccHHHHHHHHHH
Q psy6854 3 ILHVKHGDASQFLYETSTSTSIQQLLEEILN 33 (148)
Q Consensus 3 llHVK~gde~qFLyEtt~~~~ve~li~~lv~ 33 (148)
.+.||-.+...|-++..-+..|.+|...+.+
T Consensus 4 ~I~Vk~~~g~t~~l~v~~~~tV~~lK~~i~~ 34 (78)
T d2zeqa1 4 IVFVRFNSSYGFPVEVDSDTSILQLKEVVAK 34 (78)
T ss_dssp EEEEESSSSSCEEEEECTTCBHHHHHHHHHH
T ss_pred EEEEEcCCCCEEEEEEcccccHHHHHHHHHH
Confidence 5889988889999999999999998875543
No 21
>d1jo5a_ f.3.1.1 (A:) Light-harvesting complex subunits {Rhodobacter sphaeroides [TaxId: 1063]}
Probab=32.87 E-value=4.7 Score=24.12 Aligned_cols=14 Identities=57% Similarity=0.726 Sum_probs=12.1
Q ss_pred cCCCCHHHHHHhhc
Q psy6854 62 MLGLTDEQVEELKL 75 (148)
Q Consensus 62 ~qGLtdeq~~el~l 75 (148)
+-||||+|.+|++-
T Consensus 8 ~tGLT~~EA~E~H~ 21 (48)
T d1jo5a_ 8 YTGLTDEQAQELHS 21 (48)
T ss_dssp TGGGHHHHHHHHHH
T ss_pred CCCCCHHHHHHHHH
Confidence 57999999999883
No 22
>d1euvb_ d.15.1.1 (B:) SUMO-1 (smt3 homologue) {Baker's yeast (Saccharomyces cerevisiae), smt3 [TaxId: 4932]}
Probab=32.01 E-value=31 Score=20.77 Aligned_cols=32 Identities=16% Similarity=0.418 Sum_probs=24.4
Q ss_pred EEee-ccCCceeeeeecCcccHHHHHHHHHHHh
Q psy6854 4 LHVK-HGDASQFLYETSTSTSIQQLLEEILNIY 35 (148)
Q Consensus 4 lHVK-~gde~qFLyEtt~~~~ve~li~~lv~I~ 35 (148)
|+|| +++.++..|...-++++..|+..+++-.
T Consensus 5 I~ikv~~~~~~~~f~v~~~~~~~~l~~~~~~~~ 37 (79)
T d1euvb_ 5 INLKVSDGSSEIFFKIKKTTPLRRLMEAFAKRQ 37 (79)
T ss_dssp EEEEEESSSCEEEEEEETTSCTHHHHHHHHHHT
T ss_pred EEEEECCCCeEEEEEECCCCcHHHHHHHHHHHh
Confidence 5555 4567888899999999999988776443
No 23
>d1wx8a1 d.15.1.1 (A:8-90) 4931431F19Rik {Mouse (Mus musculus) [TaxId: 10090]}
Probab=31.37 E-value=31 Score=21.03 Aligned_cols=35 Identities=9% Similarity=0.210 Sum_probs=26.2
Q ss_pred CeEEEeeccCCceeeeeecCcccHHHHHHHHHHHhh
Q psy6854 1 MVILHVKHGDASQFLYETSTSTSIQQLLEEILNIYN 36 (148)
Q Consensus 1 MVllHVK~gde~qFLyEtt~~~~ve~li~~lv~I~N 36 (148)
|+.|+||..+ ..|-++..-+..|.+|...|.+..+
T Consensus 10 ~i~v~Vk~~~-~~~~i~v~~~~tV~~lK~~I~~~~~ 44 (83)
T d1wx8a1 10 IIRVSVKTPQ-DCHEFFLAENSNVRRFKKQISKYLH 44 (83)
T ss_dssp EEEEEEECSS-SEEEEEEETTCCHHHHHHHHHHHTC
T ss_pred eEEEEEEcCC-CcEEEEECCCChHHHHHHHHHHHhC
Confidence 4678999654 3467899999999999887665443
No 24
>d1v86a_ d.15.1.1 (A:) hypothetical D7wsu128e protein {Mouse (Mus musculus) [TaxId: 10090]}
Probab=30.56 E-value=42 Score=20.99 Aligned_cols=36 Identities=14% Similarity=0.123 Sum_probs=28.3
Q ss_pred CeEEEeeccCCceeeeeecCcccHHHHHHHHHHHhhh
Q psy6854 1 MVILHVKHGDASQFLYETSTSTSIQQLLEEILNIYNG 37 (148)
Q Consensus 1 MVllHVK~gde~qFLyEtt~~~~ve~li~~lv~I~N~ 37 (148)
|+.|.||.+. ..|=++...+..|.+|.+.|....+-
T Consensus 17 ~i~v~V~~~~-k~~~i~v~~~~TV~~LK~~I~~~tgv 52 (95)
T d1v86a_ 17 LVDLKIIWNK-TKHDVKVPLDSTGSELKQKIHSITGL 52 (95)
T ss_dssp CEEEEEEETT-EEEEEEECTTSBHHHHHHHHHHHHCS
T ss_pred EEEEEEEECC-EEEEEEECCCCcHHHHHHHHHHHhCC
Confidence 5678888755 46888999999999999987766553
No 25
>d1z2ma1 d.15.1.1 (A:3-78) Interferon-induced 15 kDa protein {Human (Homo sapiens) [TaxId: 9606]}
Probab=30.36 E-value=40 Score=20.14 Aligned_cols=30 Identities=30% Similarity=0.286 Sum_probs=25.6
Q ss_pred EEEeeccCCceeeeeecCcccHHHHHHHHH
Q psy6854 3 ILHVKHGDASQFLYETSTSTSIQQLLEEIL 32 (148)
Q Consensus 3 llHVK~gde~qFLyEtt~~~~ve~li~~lv 32 (148)
-|+||--+...|-++..-+..|.+|...+.
T Consensus 2 ~l~Vk~l~G~~~~v~V~~~~tV~~lK~~I~ 31 (76)
T d1z2ma1 2 DLTVKMLAGNEFQVSLSSSMSVSELKAQIT 31 (76)
T ss_dssp EEEEEESSSCEEEEECCSSCCHHHHHHHHH
T ss_pred EEEEEeCCCCEEEEEECCCCcHHHHHHHHH
Confidence 478998888889999999999999988554
No 26
>d2csba4 a.60.2.4 (A:465-519) Topoisomerase V {Methanopyrus kandleri [TaxId: 2320]}
Probab=30.19 E-value=11 Score=22.55 Aligned_cols=36 Identities=47% Similarity=0.629 Sum_probs=24.1
Q ss_pred HHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCCCccCCCCHHHHHHhh
Q psy6854 28 LEEILNIYNGRLKVYRVMAEMEELAKHGTFLPPDMLGLTDEQVEELK 74 (148)
Q Consensus 28 i~~lv~I~N~RlKi~rL~~e~eeLa~hG~~~Ppe~qGLtdeq~~el~ 74 (148)
.+.|..-|.|--|+..- -+|+|-+ .||||.||.||+
T Consensus 17 aerllkkyggyskvrea--gveelre---------dgltdaqirelk 52 (55)
T d2csba4 17 AERLLKKYGGYSKVREA--GVEELRE---------DGLTDAQIRELK 52 (55)
T ss_dssp HHHHHHHHTSHHHHHTS--CHHHHHH---------TTCCHHHHHHHH
T ss_pred HHHHHHHhcChhHHHHh--hHHHHHH---------ccccHHHHHHhh
Confidence 45566667776666432 2445543 689999999987
No 27
>d2uyzb1 d.15.1.1 (B:20-96) SUMO-1 (smt3 homologue) {Human (Homo sapiens) [TaxId: 9606]}
Probab=28.21 E-value=48 Score=19.73 Aligned_cols=33 Identities=21% Similarity=0.309 Sum_probs=26.0
Q ss_pred eEEEeeccCCceeeeeecCcccHHHHHHHHHHH
Q psy6854 2 VILHVKHGDASQFLYETSTSTSIQQLLEEILNI 34 (148)
Q Consensus 2 VllHVK~gde~qFLyEtt~~~~ve~li~~lv~I 34 (148)
|.|-||.-|.+.+-|...-++++..|....++-
T Consensus 3 I~ikv~~~dg~~v~f~v~~~t~l~kl~~~y~~~ 35 (77)
T d2uyzb1 3 IKLKVIGQDSSEIHFKVKMTTHLKKLKESYCQR 35 (77)
T ss_dssp EEEEEECTTCCEEEEEEETTSCTHHHHHHHHHH
T ss_pred EEEEEECCCCCEEEEEECCCChHHHHHHHHHHH
Confidence 456677668888899999999999998866543
No 28
>d1lvaa4 a.4.5.35 (A:575-634) C-terminal fragment of elongation factor SelB {Moorella thermoacetica [TaxId: 1525]}
Probab=27.97 E-value=41 Score=20.23 Aligned_cols=31 Identities=13% Similarity=0.177 Sum_probs=23.4
Q ss_pred HHHHHHHHhhhHHhhhhccccCHHHHHhhhcCC
Q psy6854 113 TTIEEVKNKISKTLVERNQCLTEAVVQEGKGFG 145 (148)
Q Consensus 113 ~t~~eAk~~isK~qv~~~~~lT~~~l~E~Ld~~ 145 (148)
.++++|++.|. . ...+..+|....++.+..|
T Consensus 1 qal~e~~~~i~-~-l~~~g~~~v~~frd~~g~s 31 (60)
T d1lvaa4 1 QALGEAREVIK-N-LASTGPFGLAEARDALGSS 31 (60)
T ss_dssp HHHHHHHHHHH-H-HHTTSCBCHHHHHHHHTCC
T ss_pred ChHHHHHHHHH-H-HHhcCCCcHHHHHHHHCcc
Confidence 36788888773 3 3556679999999998765
No 29
>d1ttna1 d.15.1.1 (A:21-100) Dendritic cell-derived ubiquitin-like protein {Human (Homo sapiens) [TaxId: 9606]}
Probab=27.30 E-value=43 Score=20.08 Aligned_cols=32 Identities=3% Similarity=0.141 Sum_probs=26.6
Q ss_pred eEEEeeccCCceeeeeecCcccHHHHHHHHHH
Q psy6854 2 VILHVKHGDASQFLYETSTSTSIQQLLEEILN 33 (148)
Q Consensus 2 VllHVK~gde~qFLyEtt~~~~ve~li~~lv~ 33 (148)
+.|.||-.+...|-++..-+..|.+|...+.+
T Consensus 4 ~qi~Vk~~~G~~~~l~V~~~~tV~~lK~~I~~ 35 (80)
T d1ttna1 4 CQLRLRLSTGKDLKLVVRSTDTVFHMKRRLHA 35 (80)
T ss_dssp EEEEEEETTTEEEEEEECTTSHHHHHHHHHHH
T ss_pred EEEEEEcCCCCEEEEEECCcCcHHHHHHHHHH
Confidence 46889977778999999999999999886544
No 30
>d1jl0a_ d.156.1.1 (A:) S-adenosylmethionine decarboxylase {Human (Homo sapiens) [TaxId: 9606]}
Probab=25.37 E-value=31 Score=27.21 Aligned_cols=34 Identities=18% Similarity=0.474 Sum_probs=24.9
Q ss_pred EEEeeccCCceee-eeecCc-ccHHHHHHHHHHHhh
Q psy6854 3 ILHVKHGDASQFL-YETSTS-TSIQQLLEEILNIYN 36 (148)
Q Consensus 3 llHVK~gde~qFL-yEtt~~-~~ve~li~~lv~I~N 36 (148)
-|||-..+..-|. |||++. ....++++.+++|++
T Consensus 237 TiHVTPE~~~SYaSFETN~~~~~~~~li~~vl~~F~ 272 (325)
T d1jl0a_ 237 TIAITPEPEFSYVSFETNLSQTSYDDLIRKVVEVFK 272 (325)
T ss_dssp EEEEECCTTSCEEEEEECCCCSCSHHHHHHHHHHHC
T ss_pred EEEECCCCCceeEEEecCcchhhHHHHHHHHHhhcC
Confidence 4899888776665 999974 445678887777764
No 31
>d2cmda2 d.162.1.1 (A:146-312) Malate dehydrogenase {Escherichia coli [TaxId: 562]}
Probab=24.83 E-value=22 Score=23.93 Aligned_cols=33 Identities=15% Similarity=0.238 Sum_probs=21.1
Q ss_pred CCCCCCCCCCC-CChHHHHHHHHHHHHHHHhhhH
Q psy6854 92 KDPIGRRNGYQ-PPIKMQDLIKTTIEEVKNKISK 124 (148)
Q Consensus 92 kD~~grR~G~a-p~~~~~~vL~~t~~eAk~~isK 124 (148)
++-.-..-+.+ .+++-++.|++++.+.|+.|-|
T Consensus 127 ~~Gv~~v~~l~~L~~~E~~~l~~s~~~lk~~I~~ 160 (167)
T d2cmda2 127 KNGVEERKSIGTLSAFEQNALEGMLDTLKKDIAL 160 (167)
T ss_dssp TTEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHH
T ss_pred CCceEEEeeCCCCCHHHHHHHHHHHHHHHHHHHH
Confidence 33333444553 5888888888888887766543
No 32
>d2nlza1 d.153.1.6 (A:3-539) Cephalosporin acylase {Bacillus halodurans [TaxId: 86665]}
Probab=23.33 E-value=13 Score=30.51 Aligned_cols=111 Identities=12% Similarity=0.080 Sum_probs=67.1
Q ss_pred HHHHHHHhh--hHHHHHHHHHHHHHHHhcCCCCCCccCCCCHHHHHHhhcccccCCcCCCC-CCccCCCCCCCCCCC-CC
Q psy6854 28 LEEILNIYN--GRLKVYRVMAEMEELAKHGTFLPPDMLGLTDEQVEELKLRDDQGERCKPS-GYIENKDPIGRRNGY-QP 103 (148)
Q Consensus 28 i~~lv~I~N--~RlKi~rL~~e~eeLa~hG~~~Ppe~qGLtdeq~~el~l~d~w~~~c~p~-G~~~~kD~~grR~G~-ap 103 (148)
+.-+..+|. |++...+|+....+||+.|....+.+--.-....+ .+...|.....++ ..+|.+|-.-.+-|. --
T Consensus 121 v~gl~~~~~kyG~l~w~~L~~PAI~lA~~Gf~v~~~l~~~~~~~~~--~l~~~~~~~~~~~~~~~f~~~G~~~~~Gd~~~ 198 (537)
T d2nlza1 121 PGAWAELAKMYGNLPLAASLAPAIRYAEEGYPVTPTLAKYWKAAYD--RVKTEWTDDVYQPWFDTFAPKGRAPRVGEVWR 198 (537)
T ss_dssp HHHHHHHHHHHCSSCHHHHTHHHHHHHHHCEECCHHHHHHHHHHHH--HHHHHCCSSTTHHHHHHHCTTSSCCCTTCEEC
T ss_pred chHHHHHHhhhcccchhhhhHHHHHHHhccccccHHHHHHHHHHHH--HhhcccchhhhhhHHHhhCcCCCCCCCCCEEe
Confidence 334444444 89999999999999999999877544322111111 1222222222211 234566655556664 44
Q ss_pred ChHHHHHHHHHHHHH---------HHhhhHHhhhhccccCHHHHHh
Q psy6854 104 PIKMQDLIKTTIEEV---------KNKISKTLVERNQCLTEAVVQE 140 (148)
Q Consensus 104 ~~~~~~vL~~t~~eA---------k~~isK~qv~~~~~lT~~~l~E 140 (148)
+++.+++|+.-..+- .+.|.++.-..+-.||.+.+++
T Consensus 199 ~~~LA~TL~~Ia~~G~~~FY~G~ia~~iv~~~~~~GG~lt~eDL~~ 244 (537)
T d2nlza1 199 SQGHADTLRSIAESNGESFYRGELADQIHAFFDKHGGYLTKEDLAC 244 (537)
T ss_dssp CHHHHHHHHHHHTTTTHHHHHSHHHHHHHHHHHHTTCCCCHHHHHT
T ss_pred ccchhHHHHHHhhcCcccccCCchhHhHhhhhccCCccccHHHHhc
Confidence 789999998877643 2234555556677888888775
No 33
>d1f1fa_ a.3.1.1 (A:) Cytochrome c6 (synonym: cytochrome c553) {Arthrospira maxima [TaxId: 129910]}
Probab=23.30 E-value=41 Score=19.63 Aligned_cols=27 Identities=22% Similarity=0.336 Sum_probs=16.0
Q ss_pred HHHHHhcCCCCCCccCC-CCHHHHHHhh
Q psy6854 48 MEELAKHGTFLPPDMLG-LTDEQVEELK 74 (148)
Q Consensus 48 ~eeLa~hG~~~Ppe~qG-Ltdeq~~el~ 74 (148)
+.....+|...-|.+.+ |||+|+.++-
T Consensus 50 ~~~~~~~g~~~Mp~~~~~Lsd~ei~~v~ 77 (88)
T d1f1fa_ 50 VAYQVTNGKNAMPGFNGRLSPLQIEDVA 77 (88)
T ss_dssp HHHHHHHCBTTBCCCTTTSCHHHHHHHH
T ss_pred HHHHHhcCcCCCCcccCCCCHHHHHHHH
Confidence 33445566654445544 8888876653
No 34
>d2cxfa1 a.256.1.1 (A:83-249) Rap2 interacting protein X (RUFY3) {Mouse (Mus musculus) [TaxId: 10090]}
Probab=23.22 E-value=21 Score=24.65 Aligned_cols=39 Identities=28% Similarity=0.318 Sum_probs=30.1
Q ss_pred cccHHHHHHHHHH----HhhhHHHHHHHHHHHHHHHhcCCCCC
Q psy6854 21 STSIQQLLEEILN----IYNGRLKVYRVMAEMEELAKHGTFLP 59 (148)
Q Consensus 21 ~~~ve~li~~lv~----I~N~RlKi~rL~~e~eeLa~hG~~~P 59 (148)
...|.+++++-+. |+..---+.+||..+|..-.||--.+
T Consensus 13 k~~vk~l~~~~~~~~~~i~~~~~~l~~Lc~~lE~iL~hGLK~~ 55 (167)
T d2cxfa1 13 KLSIKGLIESALNLGRTLDSDYAPLQQFFVVMEHCLKHGLKAK 55 (167)
T ss_dssp HHHHHHHHHHHHHHCSCCCTTCHHHHHHHHHHHHHHTTTBCCC
T ss_pred HHHHHHHHHHHhccCCcccCCChHHHHHHHHHHHHHHcCCccc
Confidence 3457777777666 67777779999999999999995433
No 35
>d1e29a_ a.3.1.1 (A:) Photosystem II associated cytochrome c549 {Synechocystis sp., pcc 6803 [TaxId: 1143]}
Probab=23.03 E-value=22 Score=22.91 Aligned_cols=27 Identities=19% Similarity=0.362 Sum_probs=18.2
Q ss_pred CCCCCccCCCCHHHHHHhh--------cccccCCc
Q psy6854 56 TFLPPDMLGLTDEQVEELK--------LRDDQGER 82 (148)
Q Consensus 56 ~~~Ppe~qGLtdeq~~el~--------l~d~w~~~ 82 (148)
.+-+|.+..|||+++.++- ....|+++
T Consensus 98 ~~~mp~~~~Lsdedi~~vaaYi~~qp~~~~~wGg~ 132 (135)
T d1e29a_ 98 PDIYPEMRNYTEDDIFDVAGYTLIAPKLDERWGGT 132 (135)
T ss_dssp TTTCGGGTTCCHHHHHHHHHHHHHHHHHCTTSCCB
T ss_pred CCCCCccCCCCHHHHHHHHHHHHhccccCCCCCCe
Confidence 3456777899999976553 34567654
No 36
>d1st6a4 a.24.9.1 (A:372-488) Vinculin {Chicken (Gallus gallus) [TaxId: 9031]}
Probab=22.92 E-value=1e+02 Score=20.68 Aligned_cols=24 Identities=17% Similarity=0.393 Sum_probs=17.8
Q ss_pred HHHHHhh---hHHHHHHHHHHHHHHHh
Q psy6854 30 EILNIYN---GRLKVYRVMAEMEELAK 53 (148)
Q Consensus 30 ~lv~I~N---~RlKi~rL~~e~eeLa~ 53 (148)
.|...+. -|-.|.++|+|++.|+.
T Consensus 46 kva~~~~~P~~r~~il~lc~ei~~lt~ 72 (117)
T d1st6a4 46 KVAELCEEPKERDDILRSLGEISALTA 72 (117)
T ss_dssp HHHHHSCSTTTHHHHHHHHHHHHHHHH
T ss_pred HHHHhCCChHHHHHHHHHHHHHHHHHH
Confidence 3455543 38899999999999864
No 37
>d1uela_ d.15.1.1 (A:) Ubiquitin-like domain of Rad23 homolog B (Hhr23B) {Human (Homo sapiens) [TaxId: 9606]}
Probab=22.73 E-value=65 Score=19.72 Aligned_cols=31 Identities=16% Similarity=0.244 Sum_probs=25.5
Q ss_pred EEEeeccCCceeeeeecCcccHHHHHHHHHH
Q psy6854 3 ILHVKHGDASQFLYETSTSTSIQQLLEEILN 33 (148)
Q Consensus 3 llHVK~gde~qFLyEtt~~~~ve~li~~lv~ 33 (148)
.|.||.-+...|-+|..-+..|.+|.+.|.+
T Consensus 2 ~I~vk~~~g~~~~l~v~~~~TV~~lK~~i~~ 32 (95)
T d1uela_ 2 QVTLKTLQQQTFKIDIDPEETVKALKEKIES 32 (95)
T ss_dssp EEEEEETTCCEEEEECCTTSBHHHHHHHHHH
T ss_pred EEEEEeCCCCEEEEEECCCccHHHHHHHHHh
Confidence 4788976767799999999999999886654
No 38
>d1ansa_ g.11.1.1 (A:) Neurotoxin III (ATX III) {Sea anemone (Anemonia sulcata) [TaxId: 6108]}
Probab=22.12 E-value=16 Score=18.90 Aligned_cols=10 Identities=40% Similarity=0.966 Sum_probs=8.2
Q ss_pred ccCCcCCCCC
Q psy6854 78 DQGERCKPSG 87 (148)
Q Consensus 78 ~w~~~c~p~G 87 (148)
.|+..|+|.|
T Consensus 12 pwgqncypeg 21 (27)
T d1ansa_ 12 PWGQNCYPEG 21 (27)
T ss_dssp SSSCSSCSSC
T ss_pred ccccccccCc
Confidence 5889999875
No 39
>d1wjua_ d.15.1.1 (A:) NEDD8 ultimate buster-1, NUB1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=21.90 E-value=33 Score=21.94 Aligned_cols=30 Identities=17% Similarity=0.201 Sum_probs=24.1
Q ss_pred eccCCceeeeeecCcccHHHHHHHHHHHhh
Q psy6854 7 KHGDASQFLYETSTSTSIQQLLEEILNIYN 36 (148)
Q Consensus 7 K~gde~qFLyEtt~~~~ve~li~~lv~I~N 36 (148)
|......|-+|+..+..|.+|...|.+..+
T Consensus 25 ~~~~g~~~~lev~~~~TV~~LK~~I~~~~g 54 (100)
T d1wjua_ 25 RLKKDRKNLLETRLHITGRELRSKIAETFG 54 (100)
T ss_dssp TTCCSSSEEEEEESSSBHHHHHHHHHHHTT
T ss_pred ccCCCeEEEEEECCCcHHHHHHHHHHHHHC
Confidence 334678999999999999999997765443
No 40
>d2i3oa1 d.153.1.6 (A:1-516) Hypothetical protein Ta0994 {Thermoplasma acidophilum [TaxId: 2303]}
Probab=20.29 E-value=17 Score=29.55 Aligned_cols=97 Identities=9% Similarity=-0.006 Sum_probs=57.5
Q ss_pred hHHHHHHHHHHHHHHHhcCCCCCCccCCCCHHHHHHhhcccccCCcCCCCCCccCCCCCCCCCCCC-CChHHHHHHHHHH
Q psy6854 37 GRLKVYRVMAEMEELAKHGTFLPPDMLGLTDEQVEELKLRDDQGERCKPSGYIENKDPIGRRNGYQ-PPIKMQDLIKTTI 115 (148)
Q Consensus 37 ~RlKi~rL~~e~eeLa~hG~~~Ppe~qGLtdeq~~el~l~d~w~~~c~p~G~~~~kD~~grR~G~a-p~~~~~~vL~~t~ 115 (148)
|+|....|+....+||+.|....+.+...-......+.....|+ .+|.+|-.-.+.|.- -+++++++|+.-.
T Consensus 124 G~L~w~~ll~PAI~lA~~Gf~vs~~la~~l~~~~~~l~~~~~~~-------~~f~~~g~~~~~G~~~~~p~LA~TL~~ia 196 (516)
T d2i3oa1 124 ATMDIADILEPAIRTASAGFPITQNYSDSIARSAPVIGQYRGWS-------SIFMPNGSVPVAGEILKQPDLAESFRLMS 196 (516)
T ss_dssp CCSCHHHHHHHHHHHHHHCEECCHHHHHHHHHHHHHHTTCHHHH-------HHHSTTSSCCCTTCEECCHHHHHHHHHHH
T ss_pred cccchhhhhccchhhcccccchhhHHHHHHHhhhhhhhhccchh-------hhccCCCCCCCCCCEEEChhHhHHHHHHH
Confidence 89999999999999999999887654221111111222222222 234443333333432 2679999998887
Q ss_pred HHHH---------HhhhHHhhhhccccCHHHHHh
Q psy6854 116 EEVK---------NKISKTLVERNQCLTEAVVQE 140 (148)
Q Consensus 116 ~eAk---------~~isK~qv~~~~~lT~~~l~E 140 (148)
++-. +.|.++.-..+-.||.+.+++
T Consensus 197 ~~G~~~FY~G~ia~~iv~~~~~~GG~lt~~DL~~ 230 (516)
T d2i3oa1 197 EEGFRSFYDGSLADIIIAGLEGTGSPLSDRDLRV 230 (516)
T ss_dssp HHCTTHHHHSHHHHHHHHTTTTTCCCCCHHHHHH
T ss_pred HhChhhhhhhhhhhhhhccccccCcceecccccc
Confidence 6522 223444445566788887765
No 41
>d1v6ea_ d.15.1.1 (A:) Ubiquitin-like domain of tubulin folding cofactor B {Mouse (Mus musculus) [TaxId: 10090]}
Probab=20.28 E-value=74 Score=19.89 Aligned_cols=33 Identities=18% Similarity=0.206 Sum_probs=22.2
Q ss_pred CeEEEeeccCCceeeee--ecCcccHHHHHHHHHHH
Q psy6854 1 MVILHVKHGDASQFLYE--TSTSTSIQQLLEEILNI 34 (148)
Q Consensus 1 MVllHVK~gde~qFLyE--tt~~~~ve~li~~lv~I 34 (148)
.|.+||+. +.++|-+| -+.+..|.+|...|-.+
T Consensus 7 ~v~v~I~s-~~~~~~~E~r~~~~~TV~~LK~kle~~ 41 (95)
T d1v6ea_ 7 GVMVFISS-SLNSFRSEKRYSRSLTIAEFKCKLELV 41 (95)
T ss_dssp CEEEEEEE-TTSSSCEEEEECTTSBHHHHHHHHHHH
T ss_pred cEEEEEEE-CCCCcEEEEEeCCCCCHHHHHHHHHHH
Confidence 47899996 44567788 55666777777654443
No 42
>d1q9ua_ d.129.7.1 (A:) Unnamed hypothetical protein {Bacillus stearothermophilus [TaxId: 1422]}
Probab=20.24 E-value=30 Score=22.27 Aligned_cols=58 Identities=19% Similarity=0.305 Sum_probs=36.1
Q ss_pred ceeeeeecCcccHHHHHHHHHHHhh-hHHHHHHHHHHHHHHHhcCCCCCCc--cCCCCHHH
Q psy6854 12 SQFLYETSTSTSIQQLLEEILNIYN-GRLKVYRVMAEMEELAKHGTFLPPD--MLGLTDEQ 69 (148)
Q Consensus 12 ~qFLyEtt~~~~ve~li~~lv~I~N-~RlKi~rL~~e~eeLa~hG~~~Ppe--~qGLtdeq 69 (148)
++|-|+.+++.++++++..|-.--+ .-++|..-.+--+.|.++|.-.+|. .-++....
T Consensus 1 ~m~~y~~~~~~sf~e~~~~l~~al~~~g~~v~~~~~~~~~~~~~g~~~~~~~~i~~~cnp~ 61 (128)
T d1q9ua_ 1 AMFHYTVDVSTGMNETIERLEESLKQEGFGVLWQFSVTEKLQEKGLDFSTPMVILEVCNPQ 61 (128)
T ss_dssp CCSEEEEECSSCHHHHHHHHHHHHHHTTCEEEEEEEHHHHHHHTTCCCCSCEEEEEEECHH
T ss_pred CcEEEEEecCCCHHHHHHHHHHHHHHCCCEEEEEecHHHHHHhcCCCcCCCeEEEEECCHH
Confidence 4799999999999999887654321 1222333334456677788776554 34444444
Done!